# hmmscan :: search sequence(s) against a profile database
# HMMER 3.0 (March 2010); http://hmmer.org/
# Copyright (C) 2010 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query sequence file:             peptides/protein_motifs.faa
# target HMM database:             /home/analysis/reflibs/hmmer3/pfam/26.0/pfam_a.hmm
# output directed to file:         pfam/pfam.hits
# per-seq hits tabular output:     pfam/pfam.hits.tbl
# prefer accessions over names:    yes
# max ASCII text line length:      unlimited
# number of worker threads:        4
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       MMETSP1325-20131115|3_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.059   13.1   2.4      0.062   13.0   1.7    1.1  1  PF11559.3 Afadin- and alpha -actinin-Binding
       0.17   11.4   2.9       0.19   11.3   2.0    1.2  1  PF07926.7 TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.7     9e-06     0.062      85     134 ..       2      51 ..       1      65 [. 0.91

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 9e-06
  PF11559.3  85 lerelallqekerqlekklktleqklknekeelqrlkniiqsiktqyahe 134
                 er +a+l+ +  +++ k++t+ +++ +  +elqr  +++q+ + + a e
    MMETSP1325-20131115|3_1   2 AERAVAQLEVRLHSANDKYRTTAAAHAANVDELQRGFKAAQQQREASAME 51 
                5899**************************************99998876 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.0   2.8e-05      0.19      38      83 ..      11      55 ..       2      66 .] 0.78

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.8e-05
  PF07926.7 38 eiareaqdkYerelikhaetiqeLtklkkelaelqkeaselrkead 83
                ++ +a dkY ++   ha+ + eL++  k++++ q eas +++ a 
    MMETSP1325-20131115|3_1 11 VRLHSANDKYRTTAAAHAANVDELQRGFKAAQQ-QREASAMEADAV 55
               57899********************98777655.666676666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       655  (0.0479081); expected 273.4 (0.02)
Passed bias filter:                      421  (0.0307929); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.90u 1.99s 00:00:02.89 Elapsed: 00:01:10.09
# Mc/sec: 2.26
//
Query:       MMETSP1325-20131115|2_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 1.98s 00:00:02.67 Elapsed: 00:00:05.52
# Mc/sec: 19.10
//
Query:       MMETSP1325-20131115|1_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.3   0.0     0.0023   17.5   0.0    1.3  1  PF05347.10 Complex 1 protein (LYR family)


Domain annotation for each model (and alignments):
>> PF05347.10  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.7e-07    0.0023       1      41 [.      23      64 ..      23      80 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 1.7e-07
  PF05347.10  1 kqvLsLYRalLRaarkfpdynareyi...rrriReeFrknknvt 41
                ++v  LYR++L++  +++ ++  e++   + r+++ Fr+n n++
     MMETSP1325-20131115|1_1 23 QAVCGLYRKCLKTLGSWCVDR--EVFneeATRVQQLFRANANLS 64
                5799**********9999886..777778************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.13u 2.28s 00:00:03.40 Elapsed: 00:00:07.08
# Mc/sec: 62.62
//
Query:       MMETSP1325-20131115|7_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-07   30.2   1.0    1.8e-07   30.0   0.7    1.0  1  PF00262.13 Calreticulin family


Domain annotation for each model (and alignments):
>> PF00262.13  Calreticulin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.7   1.3e-11   1.8e-07      12      75 ..       2      62 ..       1      64 [. 0.87

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 1.3e-11
  PF00262.13 12 ewekrWikseakkedeekkykGkwkveegkkykglekdkgLvlkskakhyaisaklekpisnkk 75
                +we+rW+ s+   +  +++  Gk+++++g++y+++ +dkg++++++akhy +sa ++k +++kk
     MMETSP1325-20131115|7_1  2 KWESRWVASTFPGK--SASDMGKFEWTAGNWYADE-NDKGIKTSDDAKHYGLSAMMDKSVTQKK 62
                69*******76654..67889********999875.6*********************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 1.64s 00:00:02.50 Elapsed: 00:00:03.84
# Mc/sec: 40.56
//
Query:       MMETSP1325-20131115|10_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   18.1   0.1     0.0048   16.6   0.1    2.0  1  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
       0.02   14.8   0.3        0.1   12.5   0.2    2.1  1  PF13516.1  Leucine Rich repeat
      0.062   13.4   0.1       0.25   11.5   0.0    1.9  2  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1     1e-06    0.0048       2      18 ..       5      23 ..       4      52 .. 0.93

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1e-06
                ESEEEETSS.BCB.CHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slpps 18
                L++LdLs++ +lt +++ps
    MMETSP1325-20131115|10_1  5 LQTLDLSYCrSLTgEISPS 23
                9************999987 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   2.3e-05       0.1       4      19 ..       5      21 ..       3      52 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
  PF13516.1  4 LtsLdLsnNq.igdeGl 19
               L++LdLs++  +++e  
   MMETSP1325-20131115|10_1  5 LQTLDLSYCRsLTGEIS 21
               9********87888764 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   5.6e-05      0.25       3      14 ..       5      17 ..       4      21 .. 0.89
   2 ?   -1.1   0.0      0.82   3.8e+03       8      11 ..      36      39 ..      34      46 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5.6e-05
  PF13504.1  3 LkeLdLsgnr.Lt 14
               L++LdLs++r Lt
   MMETSP1325-20131115|10_1  5 LQTLDLSYCRsLT 17
               89*******9998 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.82
  PF13504.1  8 Lsgn 11
               L ++
   MMETSP1325-20131115|10_1 36 LTNC 39
               4455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 1.59s 00:00:02.37 Elapsed: 00:00:03.20
# Mc/sec: 40.44
//
Query:       MMETSP1325-20131115|12_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.86s 00:00:01.48 Elapsed: 00:00:01.40
# Mc/sec: 94.14
//
Query:       MMETSP1325-20131115|11_1  [L=394]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-16   59.2   0.4    1.2e-15   56.5   0.3    1.9  1  PF06046.8 Exocyst complex component Sec6


Domain annotation for each model (and alignments):
>> PF06046.8  Exocyst complex component Sec6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.5   0.3   8.6e-20   1.2e-15     217     532 ..       2     360 ..       1     367 [. 0.77

  Alignments for each domain:
  == domain 1    score: 56.5 bits;  conditional E-value: 8.6e-20
  PF06046.8 217 vkeWldnllktekkeFseeeppeedddglyvtplpvdvfqmleeqldvaaeslqakilvgvleelsellrsrqdawiell...eeelkkyssvnnne...........................skeglveyliAlaNdqlkcad...........yaeklkqkyeekvsskye.eriteefeelldgfvelskeairllleiifnDlkpalsk..lftkkWytg.elmeqivetiedYleDyqeylspelfq.vlleelldelvleYlralle....kklkfkakkkrkqfaeklkrDaeqlyqffeklg......daakllsklrvleklldlleledidavvl.eveellssypdisedhveavlkaRkD 532
                +++W+d++ +         ++  + d  ++ t  p d+ + l+eq++ +a++l++ ++v+v++ +se+l+++ d+  + +   ++   +       +                           +    +   + l+Nd +++++           +  ++++  +   + +   ++++e + e+  +f+  +ke++++++  i+nD++  l +  l ++kW+++  ++ ++++t++dY++++ +++++ +f+ + ++ +ld ++  Y+ ++l+      ++++ k   +++ ++l +D + + q+f+k         a  ++++l+ l++ll+l  + + d+v++ + +e+l+s+   + ++++  l++R++
   MMETSP1325-20131115|11_1   2 MSKWTDRIDQDNA-----PTTGNAADNVHCSTHWPQDLAKVLSEQISMVAKELSGHVVVEVTKVCSEVLTRFLDKRLAGVglvDSTTITPV-----SapssfsgrgasapgqetlatmvaeeeeGSSLAMRRDATLINDLYRFSTmlqdvddavtqL--QVQKSARFQSHAEVTvDKVSELLGEMGVAFMGAAKEVCDAIVIPILNDMERSLTSqgLHSPKWLESsAMVLSMLATFDDYMNELGDLIHEDFFKaRAINACLDFILRVYVCSMLStdacLTIEPD-KPLLDKALNRLLEDRSLIEQGFQKQSssladdLACSITKRLAPLDNLLQLF-TMPLDDVKDhVTSEMLTSFGPYTMEVLKRTLDLRGN 360
                5566666544444.....3333333344788999***************************************987775500033333333.....2455779******************988666667777899999999999666666655331..222222222223333446666666777789999****************9988654599*******88999*********************86479******************6666445664.56679********************99998865668999************.555555555056799****99999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.71u 1.69s 00:00:03.40 Elapsed: 00:00:03.67
# Mc/sec: 257.27
//
Query:       MMETSP1325-20131115|8_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-19   68.7   0.0    4.4e-19   68.3   0.0    1.0  1  PF03097.13 BRO1-like domain


Domain annotation for each model (and alignments):
>> PF03097.13  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3   0.0   3.2e-23   4.4e-19      72     321 ..      55     346 ..      53     367 .. 0.85

  Alignments for each domain:
  == domain 1    score: 68.3 bits;  conditional E-value: 3.2e-23
  PF03097.13  72 lekrfpdrslk..veFtWydald.tgsplaqrslafEkasvlFnlaalysqiaasqnrssdeglkaAvkyfqrAagaFeylken......flhapseDlspetlkflvklmlAqAqecllekaild.....kkkdsliaklaaqvaelYeealealqespvktg.................ipkewaklvqlKaeyfkAlahyyqalal...eekkkyGeaiarLqeAlellkealklakkc.........kskselledlkelkdrikekleeaekdNdfiyheevpdevel 321
                 +e+r ++rsl+  ++FtW d  d +g +++  +  +E asvl  l  ++ q a ++   +++++ + + ++++Aag+ e   e         ++++ Dl++ ++++lv +++ qAq+  + +a ++     +  ++lia+++  +ae Y+ + +++ + +++                   + k +++++  K+ yf ++a+   +      ++ + +   i  L  A++++++a  +ak++          ++ ++  +l++ k+++k+ + +a+k N+ +  +++p++ + 
     MMETSP1325-20131115|8_1  55 IEARAHSRSLRqmLPFTWRDLGDtQGDSYRFGDTMLEEASVLLALTQVLLQKATAEPL-NEQSMLNVFGWLRKAAGVSEACLECvreagvPADEMPDDLKNGLVETLVGVTMVQAQHLSVRRAQMNiktnaAITHTLIARICHDTAERYRAMEKKVLKLSKAGTgavdpktgkkkpvaengVAKYFLAHIRYKQLYFMGMAYAMLGIGRvqqDDDEGVAYGIRNLMTANDMFEKAGMAAKAFvdaartfvyIDNVTIMTALDDCKSVTKQIMDKANKVNQTVFFKPIPEQPDA 346
                 56677545444458********95556*****************************64.6899999**********876655555555888889999**************************99555667999******************9999888887778999999999999999999***************99999888765533444444455789999999999999999999999999999899999*******************************98774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       496  (0.0362785); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.97u 1.30s 00:00:02.27 Elapsed: 00:00:02.12
# Mc/sec: 451.01
//
Query:       MMETSP1325-20131115|14_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       487  (0.0356202); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 1.02s 00:00:01.51 Elapsed: 00:00:02.29
# Mc/sec: 86.85
//
Query:       MMETSP1325-20131115|17_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.7   0.2       0.17   11.1   0.2    1.3  1  PF07867.6 Protein of unknown function (DUF1654)
        3.4    7.2   6.4        8.6    5.9   0.3    2.3  2  PF13833.1 EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF07867.6  Protein of unknown function (DUF1654)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   2.4e-05      0.17      28      49 ..      46      67 ..      38      71 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.4e-05
  PF07867.6 28 vihrlddesedeWeevleelae 49
               +i r+dde++ + e+vl+el++
   MMETSP1325-20131115|17_1 46 IIKRMDDEGNVDLEAVLQELEA 67
               89*****************986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.3    0.0013       8.6      34      43 ..      13      22 ..      11      25 .. 0.88
   2 ?    4.5   0.8    0.0035        24       8      37 ..      26      53 ..      25      59 .. 0.67

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0013
  PF13833.1 34 fDtdgdGkis 43
               +D+dgdG++s
   MMETSP1325-20131115|17_1 13 LDLDGDGIVS 22
               7********8 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0035
  PF13833.1  8 eeLkralallglkglseeevdil.frefDtd 37
               e+ + ++   +l+ l+++++d+l ++ +D +
   MMETSP1325-20131115|17_1 26 ESIHTNML--KLG-LTDDDMDDLiIKRMDDE 53
               56667773..444.*****776515666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.81s 00:00:01.27 Elapsed: 00:00:01.08
# Mc/sec: 164.19
//
Query:       MMETSP1325-20131115|19_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-14   53.4   0.0    4.6e-14   52.9   0.0    1.2  1  PF00929.19 Exonuclease


Domain annotation for each model (and alignments):
>> PF00929.19  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.0   3.3e-18   4.6e-14       2     145 ..      40     203 ..      39     209 .. 0.88

  Alignments for each domain:
  == domain 1    score: 52.9 bits;  conditional E-value: 3.3e-18
                 EEEEEE----T.......TT--EEEEEEEEEETTEE..EEEEEEEEEE-SSS.S--HHHHHH----HHHHTTSEEHHHHHHHHHHHHCHS...-EEEETS.HHHHCCHHHHHHHHCTTS-TT....ECGGGGECCCHHHHHCHHC--.....-SHHHHHHHCT-- CS
  PF00929.19   2 viDcEttglda.......ekdeiieiaavsivggee.eigetfdtyvkpeedakitdeateftgitqedldkapsfeevleelkellrkl...kllvahn.aafdvgfllqddlrflklemp....krndvldtlildkktlkelkr.....tslkklaekllle 145
                 v+D+Ett+ d         ++eiie++ + i++     i e f+++vkp+ ++ +t+++ ++tgi+qe++d  +s  +++ +  e+lr l    +l + +   ++v++++ d++r+  ++ +    k ++  +++ + k+t++++ +     ++l+++   l l+
    MMETSP1325-20131115|19_1  40 VLDLETTCEDYsrsgrhlSPQEIIELPTLIIDTTTGeIIAEPFHMFVKPTLHPVLTEFCKDLTGISQEEVDASGSAMDAFAANAEWLRSLgldPELRQ-GpPWAFVTVGDFDLRRCVFEDPNveteKLPAGYRQWVNTKQTFMQFYGlrkrpRHLREMVSALALD 203
                 89****************99************99998899************************************************9877633333.337999999999999999888779899999999999999999999998887788887777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.64s 00:00:01.30 Elapsed: 00:00:00.81
# Mc/sec: 828.37
//
Query:       MMETSP1325-20131115|21_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-05   22.3   0.5         35    4.8   0.0    4.8  4  PF00560.28 Leucine Rich Repeat
     0.0016   17.8   1.6       0.97    9.0   0.0    4.0  5  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.047   13.7   4.3         33    5.1   0.0    4.6  5  PF13504.1  Leucine rich repeat
      0.083   12.8   8.5         27    5.1   0.0    5.1  5  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.014        49       1      14 [.     108     121 ..     108     133 .. 0.76
   2 ?    4.8   0.0      0.01        35       2      20 ..     131     149 ..     130     151 .. 0.85
   3 ?    4.7   0.0     0.011        37       1      21 [.     152     173 ..     152     174 .. 0.89
   4 ?    3.2   0.0     0.036   1.2e+02       2      13 ..     176     187 ..     175     204 .. 0.73

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.014
                 TESEEEETSSBCBC CS
  PF00560.28   1 nLeeLdLsgNnlts 14 
                 +L+ LdL +++l +
    MMETSP1325-20131115|21_1 108 KLKGLDLGDCQLMQ 121
                 6899******9865 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.01
                 ESEEEETSSBCB.CHHHHHH CS
  PF00560.28   2 LeeLdLsgNnlt.slppsls 20 
                  + L+L g+n++ ++   ++
    MMETSP1325-20131115|21_1 131 VTNLNLAGTNIEgDIEV-FK 149
                 578*********99998.76 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.011
                 TESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28   1 nLeeLdLsgN.nlt.slppslsn 21 
                 n++eL L ++  lt +++  + n
    MMETSP1325-20131115|21_1 152 NITELILADCrYLTgNIQA-FAN 173
                 789***********99999.887 PP

  == domain 4    score: 3.2 bits;  conditional E-value: 0.036
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                 Le+L++ ++ + 
    MMETSP1325-20131115|21_1 176 LEVLNMEDCGFN 187
                 99*******887 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.37   1.3e+03      23      30 ..      50      57 ..      46      57 .. 0.76
   2 !    7.4   0.0   0.00085       2.9      24      43 ..     129     149 ..     107     150 .. 0.59
   3 !    9.0   0.0   0.00028      0.97       2      43 ..     130     172 ..     129     173 .. 0.75
   4 !    5.4   0.0    0.0038        13       2      36 ..     152     186 ..     150     196 .. 0.88
   5 ?    1.4   0.1     0.066   2.2e+02       3      17 ..     176     203 ..     176     205 .. 0.48

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.37
  PF12799.2 23 LpnLktLn 30
               L+nL +L+
   MMETSP1325-20131115|21_1 50 LTNLSSLD 57
               78888886 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.00085
  PF12799.2  24 pnLktLnLsnNpis.dlsaLa 43 
                ++ ++LnL++++i+ d+++++
   MMETSP1325-20131115|21_1 129 KSVTNLNLAGTNIEgDIEVFK 149
                478888888888876777765 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.00028
  PF12799.2   2 nLevLdLsnNnIk.dlppelanLpnLktLnLsnNpi.s.dlsaLa 43 
                + + L+L+++nI+ d++  ++ + n ++L L+ +++ + ++ a+a
   MMETSP1325-20131115|21_1 130 SVTNLNLAGTNIEgDIEV-FKEM-NITELILADCRYlTgNIQAFA 172
                578899999999989999.9998.899998888875233566665 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.0038
  PF12799.2   2 nLevLdLsnNn.Ik.dlppelanLpnLktLnLsnNpi 36 
                n ++L L++++ ++ ++ + +an+p L++Ln++ + +
   MMETSP1325-20131115|21_1 152 NITELILADCRyLTgNIQA-FANMP-LEVLNMEDCGF 186
                7899******879988***.****9.99999998765 PP

  == domain 5    score: 1.4 bits;  conditional E-value: 0.066
  PF12799.2   3 LevLdLsnN.............nIkdlp 17 
                LevL+  ++             nIkdlp
   MMETSP1325-20131115|21_1 176 LEVLNMEDCgfnrntlkskitgNIKDLP 203
                6777754443333344444444555555 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1         4   1.4e+04       1       6 [.      51      56 ..      50      57 .. 0.49
   2 ?    5.1   0.0    0.0098        33       2      14 ..     108     120 ..     107     128 .. 0.79
   3 ?    2.2   0.0      0.09   3.1e+02       2      14 ..     130     142 ..     129     145 .. 0.83
   4 ?    3.3   0.0     0.039   1.3e+02       2      14 ..     152     165 ..     151     168 .. 0.87
   5 ?    0.6   0.0      0.32   1.1e+03       3      14 ..     176     187 ..     176     203 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 4
  PF13504.1  1 pnLkeL 6 
               +nL  L
   MMETSP1325-20131115|21_1 51 TNLSSL 56
               355555 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0098
  PF13504.1   2 nLkeLdLsgnrLt 14 
                +Lk LdL +++L 
   MMETSP1325-20131115|21_1 108 KLKGLDLGDCQLM 120
                5899******974 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.09
  PF13504.1   2 nLkeLdLsgnrLt 14 
                + ++L+L+g++++
   MMETSP1325-20131115|21_1 130 SVTNLNLAGTNIE 142
                689*****99875 PP

  == domain 4    score: 3.3 bits;  conditional E-value: 0.039
  PF13504.1   2 nLkeLdLsgnr.Lt 14 
                n +eL L+++r Lt
   MMETSP1325-20131115|21_1 152 NITELILADCRyLT 165
                6799******9898 PP

  == domain 5    score: 0.6 bits;  conditional E-value: 0.32
  PF13504.1   3 LkeLdLsgnrLt 14 
                L++L+  +++++
   MMETSP1325-20131115|21_1 176 LEVLNMEDCGFN 187
                789999888764 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.37   1.3e+03       1       8 [.      50      57 ..      50      66 .. 0.87
   2 ?    3.8   0.0      0.02        69       4      15 ..     109     120 ..     107     127 .. 0.81
   3 ?    5.1   0.0     0.008        27       2      17 ..     129     144 ..     129     147 .. 0.84
   4 ?    1.8   0.0     0.088     3e+02       3      16 ..     152     166 ..     152     173 .. 0.76
   5 ?    2.3   0.0     0.062   2.1e+02       4      19 ..     176     191 ..     175     195 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.37
  PF13516.1  1 lknLtsLd 8 
               l+nL+sLd
   MMETSP1325-20131115|21_1 50 LTNLSSLD 57
               68999997 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.02
  PF13516.1   4 LtsLdLsnNqig 15 
                L+ LdL+++q+ 
   MMETSP1325-20131115|21_1 109 LKGLDLGDCQLM 120
                7779******95 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.008
  PF13516.1   2 knLtsLdLsnNqigde 17 
                k+ t+L+L +++i ++
   MMETSP1325-20131115|21_1 129 KSVTNLNLAGTNIEGD 144
                5789*********765 PP

  == domain 4    score: 1.8 bits;  conditional E-value: 0.088
  PF13516.1   3 nLtsLdLsnNq.igd 16 
                n+t+L L ++  +++
   MMETSP1325-20131115|21_1 152 NITELILADCRyLTG 166
                89*******976665 PP

  == domain 5    score: 2.3 bits;  conditional E-value: 0.062
  PF13516.1   4 LtsLdLsnNqigdeGl 19 
                L++L++ ++++  + l
   MMETSP1325-20131115|21_1 176 LEVLNMEDCGFNRNTL 191
                89*******9876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.80s 00:00:01.48 Elapsed: 00:00:00.92
# Mc/sec: 536.58
//
Query:       MMETSP1325-20131115|22_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.8e-26   89.5   0.0    1.4e-25   89.0   0.0    1.2  1  PF04366.7 Family of unknown function (DUF500)
  ------ inclusion threshold ------
       0.77    8.8   9.8        1.1    8.3   6.8    1.3  1  PF12782.2 Invertebrate innate immunity transcript family


Domain annotation for each model (and alignments):
>> PF04366.7  Family of unknown function (DUF500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   0.0   2.1e-29   1.4e-25      38     125 ..       2      90 ..       1      91 [. 0.98

  Alignments for each domain:
  == domain 1    score: 89.0 bits;  conditional E-value: 2.1e-29
  PF04366.7  38 GadlsvaagpvGrgaeadtdvse.gsapvysysksrGlfaGvslegtvlterkdanakfYgrkvtvkdIlkgeveappaakkLlevlkk 125
                G+++s+++gp+Gr+++ d ++s   +ap +sys+srG++ G+sleg++l  r+  n++fYg++vt ++Il g+veappaa++L+++lk+
   MMETSP1325-20131115|22_1   2 GGEASASVGPWGRTIKGDLRASLaAMAPTVSYSHSRGIYGGISLEGSYLGVRDAVNRNFYGEGVTSEQILMGDVEAPPAAQPLYDALKE 90 
                89********************9999*************************************************************96 PP

>> PF12782.2  Invertebrate innate immunity transcript family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   6.8   0.00016       1.1      83     120 ..     148     187 ..     109     189 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00016
  PF12782.2  83 ggpmggrrfdgprfggsr..pdgaggrpffgqggrrgdge 120
                 g  gg  fd+p  ggs     gagg pf  +gg  g+ge
   MMETSP1325-20131115|22_1 148 DGFGGGGEFDAPPPGGSSsyTAGAGGDPFVTRGGDTGNGE 187
                4566899********98622689****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.62s 00:00:01.12 Elapsed: 00:00:00.65
# Mc/sec: 700.47
//
Query:       MMETSP1325-20131115|20_1  [L=1095]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-51  172.9   0.0    1.4e-32  112.2   0.0    2.6  2  PF00899.16 ThiF family
    7.9e-37  124.5   0.1    1.5e-26   91.6   0.0    2.6  2  PF02134.16 Repeat in ubiquitin-activating (UBA) protein
    1.5e-28   99.3   1.0    3.7e-13   49.6   0.0    3.0  3  PF09358.5  Ubiquitin-activating enzyme e1 C-terminal domain
    1.2e-21   75.6   0.7    7.3e-21   73.1   0.0    2.5  2  PF10585.4  Ubiquitin-activating enzyme active site


Domain annotation for each model (and alignments):
>> PF00899.16  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0   2.2e-19   7.4e-16       3     133 ..      40     166 ..      38     169 .. 0.93
   2 !  112.2   0.0     4e-36   1.4e-32       5     135 ..     445     584 ..     442     585 .. 0.91

  Alignments for each domain:
  == domain 1    score: 58.0 bits;  conditional E-value: 2.2e-19
  PF00899.16   3 skvlvvGaGglGseaaeaLaraGvgkltlvDkDtvelsNlnRqllfreedvgkpKaevakerlreinpeveveaveeriteenleellkdvDlvvdalDniearlllndacvkkgkplisagvlgfkgqvv 133
                 s vl+vG+ glG e+a++ + aGv+++tl D    ++ +l  q+  +e ++g+p+a v + +l+e+n+ v+v+  ++++++e    +l+++ +vv     +e++l++nd+c+++gk++is  v+g  g+v+
    MMETSP1325-20131115|20_1  40 SDVLIVGLNGLGVEIAKNVILAGVKSVTLHDPTPTSWLDLSAQFYLSEGELGQPRASVSAPKLAELNQYVKVTCRDDELSPE----FLANFQCVVMINAPYETQLMVNDFCHANGKQYISTEVAGVFGSVF 166
                 78*****************************************************************************666....5555569***999************************99888874 PP

  == domain 2    score: 112.2 bits;  conditional E-value: 4e-36
  PF00899.16   5 vlvvGaGglGseaaeaLaraGv.....gkltlvDkDtvelsNlnRqllfreedvgkpKaevakerlreinpeveveaveeri...teenleell.kdvDlvvdalDniearlllndacvkkgkplisagvlgfkgqvvtv 135
                  ++vG G++G+e++++ a +G+     g++++ D+D +e sNl Rq+lfr +d+gk Ka++a+++++e+np+++++++e+r+   te+ +++ + + +D v +alDniearl++++ c  ++kpl+++g+lg+kg++ +v
    MMETSP1325-20131115|20_1 445 YFLVGSGAIGCEMLKNWALMGLaagdaGHVHITDMDSIEKSNLSRQFLFRPSDIGKMKAKAATAKAQEMNPAMKITVYEARVgseTESLFNDDFfEALDGVTNALDNIEARLYMDSRCLFYQKPLLESGTLGTKGNTQMV 584
                 679*******************************************************************************6654444444333667************************************998765 PP

>> PF02134.16  Repeat in ubiquitin-activating (UBA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   5.8e-11     2e-07       2      53 ..     727     778 ..     726     793 .. 0.89
   2 !   91.6   0.0   4.2e-30   1.5e-26       2      65 ..     840     903 ..     839     905 .. 0.97

  Alignments for each domain:
  == domain 1    score: 30.3 bits;  conditional E-value: 5.8e-11
  PF02134.16   2 fdkddddhvdfvaaaanlRaenfgik.eksrnevkqia.gnIIPaiattnAiva 53 
                 fd  d+ h+ ++ a anlRa+n+gik + + ++    + ++++P ++++ +  +
    MMETSP1325-20131115|20_1 727 FDASDPLHLAYIKAGANLRASNYGIKgTWDDAYFLAFLpNVVVPDFTPKDG--V 778
                 9*************************99**********9*********998..4 PP

  == domain 2    score: 91.6 bits;  conditional E-value: 4.2e-30
  PF02134.16   2 fdkddddhvdfvaaaanlRaenfgikeksrnevkqiagnIIPaiattnAivaaivvlelikvle 65 
                 fdkd d+h++fv+aa+nlRa+n++i+e++++  + iag+IIPaiatt+A v+++v+lel+k+++
    MMETSP1325-20131115|20_1 840 FDKDIDEHMEFVTAASNLRARNYKIPEADMHRSRLIAGKIIPAIATTTALVTGLVCLELYKIVQ 903
                 **************************************************************97 PP

>> PF09358.5  Ubiquitin-activating enzyme e1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.74   2.5e+03      32      54 ..     680     704 ..     651     709 .. 0.77
   2 !   46.8   0.0   7.6e-16   2.6e-12       1      53 [.     910     971 ..     910     979 .. 0.88
   3 !   49.6   0.0   1.1e-16   3.7e-13      48     114 ..    1018    1085 ..    1015    1094 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.74
  PF09358.5  32 tlWdrieveg..dltlkelidyfee 54 
                 +W+r+++e   + ++++l+  f e
   MMETSP1325-20131115|20_1 680 IAWTRLNFEVdyNNKIRQLLHNFPE 704
                6899999988667999999998866 PP

  == domain 2    score: 46.8 bits;  conditional E-value: 7.6e-16
  PF09358.5   1 frnaFlnlAlPffifsePieapkkki........kdkeftlWdrieveg.dltlkelidyfe 53 
                ++n+F+nlA+P+f+fseP +++++           + ++++Wdr++v+  d+tlk+lid+++
   MMETSP1325-20131115|20_1 910 YKNGFVNLAIPVFAFSEPQPPATTLAkitkdgapFEWKWSAWDRLDVKLgDITLKQLIDHMQ 971
                9********************998656676665556778*********99**********87 PP

  == domain 3    score: 49.6 bits;  conditional E-value: 1.1e-16
  PF09358.5   48 lidyfeekyglevsmisvgvkllYssf.skekkkerlekkiselveevskkklpeekkyldlevsced 114 
                 ++ +f +++gle +m+s+gv++lYs f +k+k k r+ + + +lv ev+ k++p+e+kyl++ev+c++
   MMETSP1325-20131115|20_1 1018 FMLHFPDEFGLELTMLSHGVSILYSFFqNKKKTKARMPMSMRQLVTEVTGKEVPPEQKYLIFEVMCSK 1085
                 778999*********************99*************************************96 PP

>> PF10585.4  Ubiquitin-activating enzyme active site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.0   2.1e-24   7.3e-21       1      45 []     587     631 ..     587     631 .. 0.98
   2 ?   -0.3   0.1      0.19   6.4e+02      32      41 ..     679     688 ..     676     689 .. 0.92

  Alignments for each domain:
  == domain 1    score: 73.1 bits;  conditional E-value: 2.1e-24
  PF10585.4   1 gvTecYecspdpeeksiPvCTlrsfPseieHCIeWArdlFeklFg 45 
                ++Te Y+ ++dp+eksiPvCTl++fP++ieH+++WArd+Fe++F+
   MMETSP1325-20131115|20_1 587 HLTENYGATRDPPEKSIPVCTLKNFPNQIEHTLQWARDMFEGIFK 631
                79*****************************************96 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.19
  PF10585.4  32 CIeWArdlFe 41 
                CI+W r  Fe
   MMETSP1325-20131115|20_1 679 CIAWTRLNFE 688
                ******9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1095 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.88u 1.10s 00:00:02.98 Elapsed: 00:00:01.54
# Mc/sec: 1703.90
//
Query:       MMETSP1325-20131115|24_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.77s 00:00:01.19 Elapsed: 00:00:00.91
# Mc/sec: 179.07
//
Query:       MMETSP1325-20131115|16_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-12   46.5   0.1    4.5e-12   45.9   0.1    1.3  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.1   3.3e-16   4.5e-12       2     101 ..      23     130 ..      22     132 .. 0.80

  Alignments for each domain:
  == domain 1    score: 45.9 bits;  conditional E-value: 3.3e-16
                 SBEEEEEEEETSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTT................CEEEEEESSHHHHHHHHHHHHH CS
  PF00169.24   2 ikeGyllkksellktwkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdv................esyllsaeseeerkrWvqalkn 101
                 ik+Gyllk+ ++   w+kryf L s+ L y+ s++     +p+  i+l+ +++ + +s  +     +  ++ ++ kd+                 ++++ a s+ee+k+W++a++ 
    MMETSP1325-20131115|16_1  23 IKSGYLLKQASKGGLWQKRYFELSSTTLTYTPSES---TREPRTEIDLKMVSLVTQTSRIK-----TGRSIDLHLKDTatklrgrskplrsshrARFKMRAASAEEAKQWITAIRT 130
                 89********************************9...7************8888888763.....333344444443444444444555555578******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.82s 00:00:01.58 Elapsed: 00:00:01.17
# Mc/sec: 659.51
//
Query:       MMETSP1325-20131115|27_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.6   0.0      0.014   15.4   0.0    1.1  1  PF13676.1 TIR domain


Domain annotation for each model (and alignments):
>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.0   9.9e-07     0.014      57      94 ..       1      38 [.       1      46 [. 0.82

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 9.9e-07
  PF13676.1 57 lspaylasdwvrkEleaakelgkpvipvlledcelpgl 94
               +spa+++s  + +E  +a+++g +v+p+l+e  e +++
   MMETSP1325-20131115|27_1  1 MSPAFFKSVPCFHEQLEARRNGLQVLPLLFELEENSAP 38
               69***************************775543333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        81  (0.00592452); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.59s 00:00:00.93 Elapsed: 00:00:00.78
# Mc/sec: 159.76
//
Query:       MMETSP1325-20131115|28_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.68u 0.85s 00:00:01.53 Elapsed: 00:00:00.88
# Mc/sec: 789.71
//
Query:       MMETSP1325-20131115|29_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.93s 00:00:01.50 Elapsed: 00:00:01.03
# Mc/sec: 360.62
//
Query:       MMETSP1325-20131115|30_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-15   55.8   0.1    4.5e-15   55.5   0.1    1.0  1  PF05873.7 ATP synthase D chain, mitochondrial (ATP5H)
  ------ inclusion threshold ------
      0.031   12.7   0.1      0.034   12.6   0.1    1.1  1  PF10267.4 Predicted transmembrane and coiled-coil 2 protein
      0.036   13.5   0.2      0.052   13.0   0.2    1.2  1  PF08819.6 Domain of unknown function (DUF1802)
      0.061   12.8   0.7        0.1   12.1   0.5    1.4  1  PF07104.6 Protein of unknown function (DUF1366)
      0.083   12.8   0.1       0.13   12.2   0.1    1.2  1  PF08628.7 Sorting nexin C terminal


Domain annotation for each model (and alignments):
>> PF05873.7  ATP synthase D chain, mitochondrial (ATP5H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.1   1.6e-18   4.5e-15       3     145 ..      11     153 ..       9     159 .. 0.93

  Alignments for each domain:
  == domain 1    score: 55.5 bits;  conditional E-value: 1.6e-18
                --------------------.---------TTSSSTT-----------------------.----TTTTSSS--------------TTTT----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF05873.7   3 krvalksvnwsklaervppn.qkaelkalksksetyksrvaklpeklPkiDwayykknvpekaglvdsfekkyealkipyeedkylkeVDaeekedvkeikeykaksekriqelkkeleklkkliPydqmtiedfveafPetal 145
                + va +s++ws+l  ++  +  kae+ +l+   ++ +   ++++  +  iD+a+yk++++ ++glvd+fe  y  +  p   ++ l+e+ +++ +  +e ++   +s++ri  l++ ++ +++ +   q t+e++ e +P ++ 
   MMETSP1325-20131115|30_1  11 RAVAHRSIDWSSLSTKLSSDsAKAEVSRLRATYGEIQALANNYSGPPTPIDFAAYKAKIS-TPGLVDKFEAEYKTISFPKAVAEELAEIKEQHAAMLSEAEKSVEDSKARIVALTELVAAMESNQVGYQTTLEQLYELYPGLQE 153
                88***************98725899***********9999999998889***********.*************************************************************9999999**********98765 PP

>> PF10267.4  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.2e-05     0.034     207     279 ..      81     156 ..      11     158 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.2e-05
  PF10267.4 207 aaqselslkklleeleeikeeqsrLeeslerLkeqlkk...dlklllesLqeeryraerLEeqlndltelhqnEia 279
                +++  +  k++ eel+eike+++ +  + e+  e++k     l+ l+++++++++ ++   eql +l  + q+Ei+
   MMETSP1325-20131115|30_1  81 EYKTISFPKAVAEELAEIKEQHAAMLSEAEKSVEDSKArivALTELVAAMESNQVGYQTTLEQLYELYPGLQEEIE 156
                444455568899*********998766555544445441114677889**********999*************97 PP

>> PF08819.6  Domain of unknown function (DUF1802)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   1.9e-05     0.052      33     100 ..      77     146 ..      71     161 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.9e-05
  PF08819.6  33 qFevehkeflLyPtvfhqkpeslreefrdlleeaaaekasekveikalAeveavleved...eealeklsk 100
                +Fe+e k++  +P  + ++ ++++e+++++l+ea++  +++k +i al e +a++e ++   +++le+l +
   MMETSP1325-20131115|30_1  77 KFEAEYKTIS-FPKAVAEELAEIKEQHAAMLSEAEKSVEDSKARIVALTELVAAMESNQvgyQTTLEQLYE 146
                4777776654.9*******************************************9999666666666655 PP

>> PF07104.6  Protein of unknown function (DUF1366)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.5   3.7e-05       0.1      64     113 ..      89     138 ..      63     141 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.7e-05
  PF07104.6  64 kAenEkfneldeliekskaqidKaEemlklatatlndlidtlyekevltd 113
                kA +E ++e++e+ + +  + +K+ e +k+  + l +l++++  ++v   
   MMETSP1325-20131115|30_1  89 KAVAEELAEIKEQHAAMLSEAEKSVEDSKARIVALTELVAAMESNQVGYQ 138
                99***************************************999887655 PP

>> PF08628.7  Sorting nexin C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   4.7e-05      0.13      49     111 ..      84     154 ..      75     155 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.7e-05
  PF08628.7  49 eilwptg...klasppper....sdeeklrtkkeak.keLqellpdalvkvvGreaareaisrvfdmLQnp 111
                 i +p++   +la+ +++     s++ek+ +  +a+   L+el+  + ++ vG +++ e + +++  LQ++
   MMETSP1325-20131115|30_1  84 TISFPKAvaeELAEIKEQHaamlSEAEKSVEDSKARiVALTELVAAMESNQVGYQTTLEQLYELYPGLQEE 154
                56676665554444444334446999***99999998899*****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1016  (0.0743125); expected 273.4 (0.02)
Passed bias filter:                      779  (0.0569778); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.88s 00:00:01.58 Elapsed: 00:00:01.15
# Mc/sec: 347.06
//
Query:       MMETSP1325-20131115|26_1  [L=433]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   13.2   0.0      0.071   12.6   0.0    1.3  1  PF13489.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.2e-06     0.071      16      57 ..     165     208 ..     153     339 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.2e-06
  PF13489.1  16 llar..lkpggrvLDiGcGtGillellaengfdvtgvDpspaai 57 
                ll+r  l++g  vLD++ G G+l+ lla +g  ++ vDp p a 
   MMETSP1325-20131115|26_1 165 LLTRsgLAAGSGVLDVAGGRGDLSGLLALEGIPCHVVDPRPDAG 208
                344444788999***************************88764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.73s 00:00:01.54 Elapsed: 00:00:00.75
# Mc/sec: 1383.50
//
Query:       MMETSP1325-20131115|32_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.62s 00:00:00.94 Elapsed: 00:00:00.77
# Mc/sec: 96.48
//
Query:       MMETSP1325-20131115|25_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-15   56.4   0.0    5.3e-15   55.8   0.0    1.3  1  PF03747.9 ADP-ribosylglycohydrolase


Domain annotation for each model (and alignments):
>> PF03747.9  ADP-ribosylglycohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.8   0.0   3.9e-19   5.3e-15     185     286 ..      84     181 ..      58     184 .. 0.72

  Alignments for each domain:
  == domain 1    score: 55.8 bits;  conditional E-value: 3.9e-19
                HHHCH..HHHHCCT-HHHHHHHHHHHG---HCH.....HHHH-----BHHHHHHHHHHHHHH.-SSS----HHHHT----CCCHHHH-----------TTS- CS
  PF03747.9 185 aldaakeqlataeadeelseeleaaralaesdrvdaeeelgrlgsggyvvealpaalyallkaaddfeeallaavnlGgDtdttaaiaGallGalyGvsaiP 286
                + + ++  ++ + ++++  + +e  +++  s +       + +  g +  + l++al+a ++ +d+f  ++ ++vnl gD+d+ta +aG+++Ga+yG+s+i 
   MMETSP1325-20131115|25_1  84 SSESEESLERCWNWRDPDLQVIETCVRRGHSYN---GYPVSPGYFGAFSMDGLAMALWACYH-SDSFGATVEKCVNLLGDSDSTASVAGQIAGAMYGYSRID 181
                333332333334444444447777777777777...555556667999**************.************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.54s 00:00:01.08 Elapsed: 00:00:00.81
# Mc/sec: 701.16
//
Query:       MMETSP1325-20131115|33_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-15   55.2   3.3    7.9e-15   54.4   2.3    1.4  1  PF00444.13 Ribosomal protein L36


Domain annotation for each model (and alignments):
>> PF00444.13  Ribosomal protein L36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   2.3   5.7e-19   7.9e-15       1      38 []      38      78 ..      38      78 .. 0.99

  Alignments for each domain:
  == domain 1    score: 54.4 bits;  conditional E-value: 5.7e-19
  PF00444.13  1 MKVrssv...KkrckdCkvvrRkGrlyViCkanprHKqRQg 38
                MKV  s+   Kkr++ C+vvrR+Gr+y i ++npr K+RQg
    MMETSP1325-20131115|33_1 38 MKVVHSIgslKKRSRTCQVVRRRGRTYLIDPKNPRNKARQG 78
                9***************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.72s 00:00:01.15 Elapsed: 00:00:01.05
# Mc/sec: 209.97
//
Query:       MMETSP1325-20131115|31_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-15   57.8  15.0    1.7e-15   57.2  10.4    1.2  1  PF04116.8 Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> PF04116.8  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2  10.4   1.3e-19   1.7e-15       2     114 .]      34     149 ..      33     149 .. 0.92

  Alignments for each domain:
  == domain 1    score: 57.2 bits;  conditional E-value: 1.3e-19
  PF04116.8   2 llallladfveylvHrllHevpf.lwrf.HkvHHssesltaltafrihplealllalllllllllllgtsllvillvvllgallylltHsgvhhrlkpllsyl.fvlpayHrlHHs 114
                ++ lll+d+v+yl+H   H+++f l+r+ Hk HH+ ++++++ af  ++++++l+ l++ll++  ++++ +++++++ +l+a +  l+Hs++hh + p ++ + f+++a H++HH+
   MMETSP1325-20131115|31_1  34 AIQLLLQDVVQYLMHFGEHKISFvLYRMsHKPHHRFTNPKLFDAFNGSAADTFLMILIPLLITSRVVHCNVWTYMTFGTLYANWLCLIHSEYHHPWDPVFRQIgFGTAADHHVHHK 149
                56789******************999777***************************************************************888887776552889999*****5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.64s 00:00:01.14 Elapsed: 00:00:00.91
# Mc/sec: 500.34
//
Query:       MMETSP1325-20131115|34_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0002   20.9   0.0       0.44   10.2   0.0    2.1  2  PF08100.6  Dimerisation domain
    0.00051   19.6   0.1       0.16   11.6   0.0    2.1  2  PF12840.2  Helix-turn-helix domain
    0.00072   19.1   2.8     0.0013   18.3   1.9    1.4  1  PF06791.8  Prophage tail length tape measure protein
      0.004   16.8   1.5       0.13   11.9   0.1    2.1  2  PF02627.15 Carboxymuconolactone decarboxylase family
  ------ inclusion threshold ------
      0.053   12.9   1.1        2.3    7.6   0.0    2.7  4  PF09851.4  Short C-terminal domain
      0.057   13.1   0.5        8.7    6.0   0.0    2.8  4  PF03412.10 Peptidase C39 family
       0.06   13.6   0.0         10    6.5   0.0    2.0  2  PF03477.11 ATP cone domain
       0.18   11.3   1.9       0.41   10.1   1.4    1.4  1  PF10145.4  Phage-related minor tail protein
       0.28   10.6   2.5         10    5.6   0.2    2.2  2  PF02885.12 Glycosyl transferase family, helical bundle domain


Domain annotation for each model (and alignments):
>> PF08100.6  Dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0    0.0006      0.92       9      33 ..       7      31 ..       3      42 .. 0.86
   2 !   10.2   0.0   0.00029      0.44       9      32 ..      46      69 ..      41      79 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0006
  PF08100.6  9 LglldiiakaggkplspselaskLp 33
               L++ld ++ a+   ++++elas+  
   MMETSP1325-20131115|34_1  7 LNVLDKLYDAREGGVTAEELASAAR 31
               9**********889*******9865 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00029
  PF08100.6  9 LglldiiakaggkplspselaskL 32
               L++ld ++ ag   ++++ela++ 
   MMETSP1325-20131115|34_1 46 LNVLDKLYDAGAGGVTAEELATAA 69
               9**********889*******975 PP

>> PF12840.2  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00011      0.16      13      48 ..       7      49 ..       4      56 .. 0.74
   2 !    8.2   0.0    0.0012       1.9      13      34 ..      46      69 ..      40      79 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00011
               HHHHHHH....H----HHHHHHHHT.....--HHHHHHHHHHH CS
  PF12840.2 13 rrilraL..areegltaselaerld.....lpqstlsyHLrvL 48
               + +l+ L  are+g+ta+ela + +     ++ +++   L+vL
   MMETSP1325-20131115|34_1  7 LNVLDKLydAREGGVTAEELASAARrvatqGKSAECGTALNVL 49
               678999999*************994444445555555555555 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0012
               HHHHHHH....H----HHHHHHHH CS
  PF12840.2 13 rrilraL..areegltaselaerl 34
               + +l+ L  a+++g+ta+ela + 
   MMETSP1325-20131115|34_1 46 LNVLDKLydAGAGGVTAEELATAA 69
               678999999************987 PP

>> PF06791.8  Prophage tail length tape measure protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   1.9   8.3e-07    0.0013     112     168 ..      19      79 ..       6      81 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 8.3e-07
  PF06791.8 112 aGvtasqLadmarkisa..vggtqgaaaealtaL..aaaGkvageqleavaqaaakmeeat 168
                 Gvta++La++ar+++     +  g+a ++l++L  a+aG v+ e+l+ +a+ ++++ + t
   MMETSP1325-20131115|34_1  19 GGVTAEELASAARRVATqgKSAECGTALNVLDKLydAGAGGVTAEELATAARRVVTQGKST 79 
                6**************9855667789*********888888999999999999888776655 PP

>> PF02627.15  Carboxymuconolactone decarboxylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.1   8.7e-05      0.13      49      84 ..      15      50 ..      12      51 .. 0.86
   2 ?    4.5   0.1     0.018        27      53      68 ..      58      73 ..      52      80 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.7e-05
                HHHHTT--HHHHHHHHHHHHHCSSBHHHHHHHHHHH CS
  PF02627.15 49 aalkaGvteeeiaealaqaaayaggpaalaalaaae 84
                +a++ Gvt+ee+a a++  a  + ++    al++++
    MMETSP1325-20131115|34_1 15 DAREGGVTAEELASAARRVATQGKSAECGTALNVLD 50
                79***********99999999988888889988875 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.018
                TT--HHHHHHHHHHHH CS
  PF02627.15 53 aGvteeeiaealaqaa 68
                 Gvt+ee+a+a++  +
    MMETSP1325-20131115|34_1 58 GGVTAEELATAARRVV 73
                69*******8877654 PP

>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.033        50       3      14 ..       5      16 ..       4      16 .. 0.88
   2 ?   -3.4   0.0       4.6     7e+03       3       5 ..      24      26 ..      22      32 .. 0.51
   3 ?    7.6   0.0    0.0015       2.3       3      16 ..      44      57 ..      43      57 .. 0.91
   4 ?   -2.9   0.0       3.2   4.8e+03       2       9 ..      62      69 ..      61      71 .. 0.52

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.033
  PF09851.4  3 daLekLkeLyar 14
               +aL  L++Ly++
   MMETSP1325-20131115|34_1  5 TALNVLDKLYDA 16
               5899******95 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 4.6
  PF09851.4  3 daL 5 
               ++L
   MMETSP1325-20131115|34_1 24 EEL 26
               444 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0015
  PF09851.4  3 daLekLkeLyarGe 16
               +aL  L++Ly++G+
   MMETSP1325-20131115|34_1 44 TALNVLDKLYDAGA 57
               5899********96 PP

  == domain 4    score: -2.9 bits;  conditional E-value: 3.2
  PF09851.4  2 adaLekLk 9 
               a++L+  +
   MMETSP1325-20131115|34_1 62 AEELATAA 69
               45665555 PP

>> PF03412.10  Peptidase C39 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0057       8.7      30      58 ..       6      34 ..       2      42 .. 0.85
   2 ?    0.2   0.0      0.36   5.4e+02       4      16 ..      33      45 ..      31      54 .. 0.79
   3 ?    4.0   0.0     0.023        35      30      57 ..      45      72 ..      38      80 .. 0.86
   4 ?    1.6   0.0      0.13     2e+02       3      16 ..      71      84 .]      69      84 .] 0.87

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0057
  PF03412.10 30 sleeLrelagtdeeGlslsglkkaaeklg 58
                +l+ L +l++ +e G+++++l +aa+++ 
    MMETSP1325-20131115|34_1  6 ALNVLDKLYDAREGGVTAEELASAARRVA 34
                677899999****************9875 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.36
  PF03412.10  4 vvlqveekdcGla 16
                v  q ++ +cG a
    MMETSP1325-20131115|34_1 33 VATQGKSAECGTA 45
                678999*****86 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.023
  PF03412.10 30 sleeLrelagtdeeGlslsglkkaaekl 57
                +l+ L +l++  + G+++++l +aa+++
    MMETSP1325-20131115|34_1 45 ALNVLDKLYDAGAGGVTAEELATAARRV 72
                677899999999************9986 PP

  == domain 4    score: 1.6 bits;  conditional E-value: 0.13
  PF03412.10  3 kvvlqveekdcGla 16
                 vv q ++++cG a
    MMETSP1325-20131115|34_1 71 RVVTQGKSTECGTA 84
                5899********86 PP

>> PF03477.11  ATP cone domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0066        10      41      69 ..       6      34 ..       4      44 .. 0.86
   2 ?    5.5   0.0     0.014        21      41      67 ..      45      71 ..      43      80 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0066
  PF03477.11 41 aeevekqledkkeegisteeIqdlvektl 69
                a++v ++l+d +e g++ ee+     +++
    MMETSP1325-20131115|34_1  6 ALNVLDKLYDAREGGVTAEELASAARRVA 34
                789*******9999******998887776 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.014
  PF03477.11 41 aeevekqledkkeegisteeIqdlvek 67
                a++v ++l+d +  g++ ee+ +   +
    MMETSP1325-20131115|34_1 45 ALNVLDKLYDAGAGGVTAEELATAARR 71
                7899****************9887655 PP

>> PF10145.4  Phage-related minor tail protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.4   0.00027      0.41      11      70 ..      18      77 ..      11      80 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00027
  PF10145.4 11 dtgqsaeeaaeaveelakaGlsgkellngflegalkl..atAggadlaeaaeiaatalnafg 70
               + g++aee+a+a+  +a +G +++e    +l+ + kl  a Agg +++e+a++a  + ++ +
   MMETSP1325-20131115|34_1 18 EGGVTAEELASAARRVATQG-KSAECG-TALNVLDKLydAGAGGVTAEELATAARRVVTQGK 77
               45666666666666666666.444433.5666666665566666666666666666655544 PP

>> PF02885.12  Glycosyl transferase family, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.2    0.0069        10      48      62 ..      20      34 ..      16      38 .. 0.81
   2 ?    5.2   0.1    0.0091        14      48      62 ..      59      73 ..      56      77 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0069
                ---HHHHHHHHHHHH CS
  PF02885.12 48 getaeEiagaakAmr 62
                g taeE+a aa+ + 
    MMETSP1325-20131115|34_1 20 GVTAEELASAARRVA 34
                79*********9765 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0091
                ---HHHHHHHHHHHH CS
  PF02885.12 48 getaeEiagaakAmr 62
                g taeE+a aa+ ++
    MMETSP1325-20131115|34_1 59 GVTAEELATAARRVV 73
                78*********9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.42u 0.51s 00:00:00.93 Elapsed: 00:00:00.80
# Mc/sec: 251.62
//
Query:       MMETSP1325-20131115|36_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.58s 00:00:01.03 Elapsed: 00:00:00.89
# Mc/sec: 382.34
//
Query:       MMETSP1325-20131115|38_1  [L=485]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-29  102.9   0.0    2.9e-23   82.3   0.0    2.2  2  PF07162.6 Ciliary basal body-associated, B9 protein


Domain annotation for each model (and alignments):
>> PF07162.6  Ciliary basal body-associated, B9 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   9.1e-08    0.0012       5      51 ..     144     201 ..     140     206 .. 0.85
   2 !   82.3   0.0   2.1e-27   2.9e-23      41     166 ..     265     409 ..     252     411 .. 0.94

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 9.1e-08
  PF07162.6   5 iGeiesAegfeednlfvryelvlgpdwkllsges...........lsgvtqtarskel 51 
                + e++sA+ f++d lf++y++ l+ +w+                 lsg+tq+a++kel
   MMETSP1325-20131115|38_1 144 RIELVSAISFDADWLFCEYQVLLPLGWRPDALSAgwvrndhgewtLSGSTQVASCKEL 201
                5599************************66666666777778899*********9985 PP

  == domain 2    score: 82.3 bits;  conditional E-value: 2.1e-27
  PF07162.6  41 gvtqtarskelknddvavfshpfdlelkttnpkg......wPqLvvtvlsldswgrerleGYgyvevPlkpgkheitvplwrpvssslveklrsfflGgspeledksilas..............gldrfglktestGsVklrlnv 166
                g+t ta   + + + va+f +p+ +++ ++++++       P ++++v+s+ s++r+r++GYgy  +P ++g++e++v++wrp s+++ ++l +ff+Gg+  l d  ++a                l++fg+ t+s G+V +r++ 
   MMETSP1325-20131115|38_1 265 GITPTAGDVTESIQPVAHFGLPIRFNVFSSHDNSgelmmaTPLVLFQVSSVHSFERHRIQGYGYTRLPVTAGSKEVEVSTWRP-SGDFSSQLAEFFVGGANRLSDLRYIAHpptavhqghaphtrFLSKFGFMTNSAGKVRVRVHA 409
                667777666767888999*********99999999************************************************.*********************9999999************99*****************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.91u 0.69s 00:00:01.60 Elapsed: 00:00:00.96
# Mc/sec: 1210.66
//
Query:       MMETSP1325-20131115|40_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.59s 00:00:00.95 Elapsed: 00:00:00.80
# Mc/sec: 200.69
//
Query:       MMETSP1325-20131115|41_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-55  186.6   0.0      6e-55  186.3   0.0    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.3   0.0   4.4e-59     6e-55     257     452 ..      14     209 ..       6     222 .. 0.92

  Alignments for each domain:
  == domain 1    score: 186.3 bits;  conditional E-value: 4.4e-59
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14 257 akiadellaweeqvskekavyetlnlfsidstktliaegWvpakeleelkkaleeateesgsevpsilnr.ietneepPtylktnkftagfqsivdaYgiakYrEvnpalltiitFpflFgvmlGDlGyGlilllialllvlkekklkakkdEifqmffkgryilllmgvfSiytGliyndvfskslnifgsgwknp 452
                   +a ++  w  +v++ekavy+tlnl + d+  +l  egW+ a++le++k+ ++++ ++ ++  +s++++  +   +pPt +  n ft ++q++v++Yg+++Y+E np+l+t++tFpflFg m GD+G+G  ll+ +l+lv + +  + + dE+   ++  ry++++mg+f++y+Gl+ynd+f+ +ln+fgs+w+++
    MMETSP1325-20131115|41_1  14 XDLATKVETWLRVVTREKAVYHTLNLYKADVHGMLRGEGWIVADQLETVKNLVNASHASFDVAGSSLIEPvPKPWPTPPTSFALNDFTYPYQEFVETYGVPRYKEANPSLFTAVTFPFLFGLMYGDIGHGTALLCGGLFLVFSYNPNA-RLDEMTGGIYAARYMIVMMGAFAVYAGLVYNDCFALALNLFGSNWEWK 209
                 56789999******************************************************87776665156789*****************************************************************9987655.556********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.54s 00:00:01.08 Elapsed: 00:00:00.77
# Mc/sec: 703.35
//
Query:       MMETSP1325-20131115|43_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.48s 00:00:00.82 Elapsed: 00:00:00.70
# Mc/sec: 249.91
//
Query:       MMETSP1325-20131115|42_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-05   22.4   0.1    0.00027   20.7   0.0    1.8  2  PF03126.13 Plus-3 domain
  ------ inclusion threshold ------
       0.23   11.4   2.1       0.26   11.2   1.4    1.3  1  PF12279.3  Protein of unknown function (DUF3619)


Domain annotation for each model (and alignments):
>> PF03126.13  Plus-3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0     4e-08   0.00027      70     107 ..       3      40 ..       1      41 [. 0.92
   2 ?   -0.5   0.0      0.17   1.1e+03      32      58 ..      54      78 ..      48     112 .. 0.63

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 4e-08
  PF03126.13  70 kllkvkhgksekefrisfvsnsdfteeefkrwlqelek 107
                   l++k gk+ek  +i+++sn++ft +e+ rw+ ++++
    MMETSP1325-20131115|42_1   3 LGLRLKFGKNEKLEKIDKISNHRFTADELGRWKTQMRD 40 
                 5699*****************************99976 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.17
  PF03126.13 32 RvnigkdketqqklYrlvqitgvkegk 58
                R++  k+ +  q++Y+  +i++++ ++
    MMETSP1325-20131115|42_1 54 RLQATKRAQ--QHTYKPEEIAEMVRKR 78
                555554433..3346666666655544 PP

>> PF12279.3  Protein of unknown function (DUF3619)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.4   3.8e-05      0.26      11      64 ..      36      90 ..      26     118 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.8e-05
  PF12279.3 11 rraLdesaadl.ppditeRLaaARraaLarkkaeakvakvrvagaalagsggall 64
               +++ d++++ + p +  +RL+a +ra+ + +k+e+ ++ vr  ++a  + g   l
   MMETSP1325-20131115|42_1 36 TQMRDDRERMItPTECVNRLQATKRAQQHTYKPEEIAEMVRKRQLAATQTGRRNL 90
               55556666666245789******************99999999988888776544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       879  (0.064292); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.57s 00:00:01.04 Elapsed: 00:00:00.83
# Mc/sec: 355.12
//
Query:       MMETSP1325-20131115|44_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   12.5   1.4      0.043   12.1   1.0    1.2  1  PF08016.7 Polycystin cation channel


Domain annotation for each model (and alignments):
>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.0   3.1e-06     0.043     371     425 ..      30      84 ..      22      85 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.1e-06
  PF08016.7 371 siltlfrlllgafsytelesgnrvLGpllfltlvflvifillnlflavindsyee 425
                s++ ++++ ++ + y   +s n++ + +  ++lvfl+ ++ ln ++a++ dsy++
   MMETSP1325-20131115|44_1  30 SFVHVVNMAVYGEVYFLDTSSNKIASEITWMILVFLISVVSLNALIALLSDSYAQ 84 
                66777777777777775669*********************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       969  (0.0708748); expected 273.4 (0.02)
Passed bias filter:                      647  (0.047323); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.60s 00:00:01.24 Elapsed: 00:00:00.83
# Mc/sec: 672.71
//
Query:       MMETSP1325-20131115|47_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-12   46.0   0.0    5.1e-12   45.9   0.0    1.0  1  PF00091.20 Tubulin/FtsZ family, GTPase domain


Domain annotation for each model (and alignments):
>> PF00091.20  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   3.7e-16   5.1e-12       1      56 [.       3      64 ..       3      65 .] 0.94

  Alignments for each domain:
  == domain 1    score: 45.9 bits;  conditional E-value: 3.7e-16
                -EEEE-------HHHHHHHH...................................------E CS
  PF00091.20  1 eivvvgvGqcGnqigdelweqlalehsiaad......dkkpardddpsvfFaesgkgvylar 56
                e++ +++Gq+G+q g+++we+++leh+i++d      ++    dd++++fF+e+g g++++r
    MMETSP1325-20131115|47_1  3 EVISIHIGQGGIQSGNACWELYCLEHGIQPDgqmpsdKTIGGGDDAFNTFFSETGAGKHVPR 64
                799******************************999777788999*************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.48s 00:00:00.84 Elapsed: 00:00:00.71
# Mc/sec: 219.38
//
Query:       MMETSP1325-20131115|50_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-22   78.5   0.0    7.1e-21   74.1   0.0    2.1  2  PF00651.26 BTB/POZ domain
      2e-05   24.3   1.1    3.1e-05   23.7   0.1    1.8  2  PF13854.1  Kelch motif
    0.00017   21.1   0.1    0.00038   20.0   0.0    1.5  1  PF13418.1  Galactose oxidase, central domain
    0.00061   19.7   0.2     0.0025   17.8   0.2    1.9  2  PF13415.1  Galactose oxidase, central domain
     0.0032   17.3   0.1      0.008   16.1   0.1    1.6  1  PF07646.10 Kelch motif
     0.0084   15.5   0.1      0.014   14.7   0.0    1.4  1  PF01344.20 Kelch motif


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.0   3.1e-24   7.1e-21       3     108 ..      62     167 ..      60     170 .. 0.87
   2 ?    2.7   0.0     0.049   1.1e+02      82     109 ..     173     200 ..     167     202 .. 0.87

  Alignments for each domain:
  == domain 1    score: 74.1 bits;  conditional E-value: 3.1e-24
                 HHHHTT-S--EEEEETTTEEEEE-HHHHHHH-HHHHHHTTTT.TTTT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC.ECCHHHHHHHHHHHHT-HHHHCHHHHHHH CS
  PF00651.26   3 elreqgelcDvtlvvgdgkefkahkavLaarSpyFkalftgg.eieestvseieledvepevfealLefiYtgeleitseenveelLaaadllqiprlkdaceeflk 108
                 +l ++ e++Dvt+vv+d + ++a ++ La+rS+ F+a++ gg ++++s + ei ++dv++ vf ++Lef+Yt+ ++    + ++ lL a++ + ++rlk  ce+ + 
    MMETSP1325-20131115|50_1  62 SLINHREFSDVTFVVDD-QPVYASRVHLASRSEHFRAMLYGGmRESQSGTGEIVIQDVSHPVFMKMLEFLYTDMVTDIPPDVAVPLLIASEQYLLDRLKGLCEDAIR 167
                 677889**********5.9***********************544444545**********************98765478888888888*************9886 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.049
                 CHHHHHHHHHHHHT-HHHHCHHHHHHHH CS
  PF00651.26  82 enveelLaaadllqiprlkdaceeflke 109
                 env   + aa++ + + lk++c e+l+e
    MMETSP1325-20131115|50_1 173 ENVIPTFLAAHRHRAEGLKEICLEYLLE 200
                 78999999****************9987 PP

>> PF13854.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.1   1.3e-08   3.1e-05       1      37 [.      10      44 ..      10      47 .. 0.93
   2 ?   -2.4   0.0         2   4.5e+03      19      24 ..      99     104 ..      99     113 .. 0.67

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 1.3e-08
  PF13854.1  1 lPppRarhcavvvsgniylyGGksgnddsvsddvyvL 37
               +P++R++  a v++++++++GG++g  + v++d+y +
   MMETSP1325-20131115|50_1 10 VPSGRSSLVAQVYNTSLFVFGGYNG--QVVLNDFYEF 44
               69**********************6..********75 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 2
  PF13854.1  19 lyGGks 24 
                lyGG+ 
   MMETSP1325-20131115|50_1  99 LYGGMR 104
                79*986 PP

>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.7e-07   0.00038       9      36 ..      20      46 ..      13      48 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 1.7e-07
  PF13418.1  9 avpdgrlylfGGenedggplnDlyvfDl 36
               +v + +l++fGG+n++  +lnD+y f +
   MMETSP1325-20131115|50_1 20 QVYNTSLFVFGGYNGQ-VVLNDFYEFRF 46
               378999*********9.*******9976 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2   1.1e-06    0.0025       2      25 ..      24      45 ..      23      49 .. 0.90
   2 ?   -2.0   0.0       1.8     4e+03       6      20 ..      99     112 ..      97     141 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.1e-06
  PF13415.1  2 delyvfGGlgddgqtrlndvyvld 25
                +l+vfGG++  gq  lnd+y++ 
   MMETSP1325-20131115|50_1 24 TSLFVFGGYN--GQVVLNDFYEFR 45
               579*******..*********996 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.8
  PF13415.1   6 vfGGlgddgqtrlnd 20 
                ++GG + ++q  +++
   MMETSP1325-20131115|50_1  99 LYGGMR-ESQSGTGE 112
                689988.55655555 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   3.5e-06     0.008       2      38 ..      14      47 ..      13      47 .. 0.91

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.5e-06
  PF07646.10  2 ryghsavvpggkiyvvGGahtdngllsssdlnvldpe 38
                r++  a v++  ++v+GG+   ng  +++d++ +++e
    MMETSP1325-20131115|50_1 14 RSSLVAQVYNTSLFVFGGY---NGQVVLNDFYEFRFE 47
                77888999***********...**********99875 PP

>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   6.4e-06     0.014       2      31 ..      14      42 ..      13      47 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 6.4e-06
                SSCEEEEEETTEEEEE---BSTTS-TTEEE CS
  PF01344.20  2 rssagvvvldgkiYviGGrdgdtnalnsVe 31
                rss  + v++  ++v+GG++g + +ln+ +
    MMETSP1325-20131115|50_1 14 RSSLVAQVYNTSLFVFGGYNG-QVVLNDFY 42
                8999999**************.*****987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.53s 00:00:01.08 Elapsed: 00:00:00.68
# Mc/sec: 807.01
//
Query:       MMETSP1325-20131115|52_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.44s 00:00:00.77 Elapsed: 00:00:00.73
# Mc/sec: 259.33
//
Query:       MMETSP1325-20131115|53_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.44s 00:00:00.76 Elapsed: 00:00:00.70
# Mc/sec: 140.36
//
Query:       MMETSP1325-20131115|55_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-34  117.1   0.0    4.4e-34  116.7   0.0    1.1  1  PF08888.6 HopJ type III effector protein


Domain annotation for each model (and alignments):
>> PF08888.6  HopJ type III effector protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.7   0.0   3.2e-38   4.4e-34       5     107 ..      24     129 ..      20     132 .. 0.94

  Alignments for each domain:
  == domain 1    score: 116.7 bits;  conditional E-value: 3.2e-38
                HHHHHHHH-GGG--HHHHHHHHHHHEEE----EE----EE-TTS----HHHHH---TT---HHH...HHHH---IIIIIITT-TT----HHHHHHHH------EES CS
  PF08888.6   5 elleklksepeeieFedtlavieeeydftptaFkngeleneageneGsckifafakleelseee...tLalFgeyYredvlenpegedHqniRnfmktgwegikfe 107
                +++e+lk++p++++F+dt+a+ie+ +++ pt+   g+++ne g neGscki++fa+l++l+ e+   tL+lFg+yYr++v+enp+g+dH+niR++ + gw+++kf 
   MMETSP1325-20131115|55_1  24 KFIENLKTNPTSVSFDDTMAIIESDFEYLPTRLIIGDVNNEPGVNEGSCKILSFARLTGLDVEDkelTLNLFGDYYRKEVMENPDGDDHANIRALAAGGWDAVKFP 129
                699*********************************************************85543449************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.46s 00:00:00.92 Elapsed: 00:00:00.71
# Mc/sec: 573.78
//
Query:       MMETSP1325-20131115|45_1  [L=654]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0012   18.5   0.6       0.49   10.5   0.1    3.5  3  PF13516.1 Leucine Rich repeat
  ------ inclusion threshold ------
      0.015   15.2   2.8        6.3    6.7   0.1    3.5  3  PF09235.5 Ste50p, sterile alpha motif


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   7.2e-05      0.49       1      19 [.     281     300 ..     281     303 .. 0.89
   2 !    4.0   0.0    0.0087        59       1      18 [.     307     325 ..     307     329 .. 0.90
   3 ?   -1.6   0.0      0.59     4e+03       1      12 [.     333     344 ..     333     346 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 7.2e-05
  PF13516.1   1 lknLtsLdLsnNq.igdeGl 19 
                ++n+tsL+++++  ++de +
   MMETSP1325-20131115|45_1 281 CPNITSLNVQDCRsLTDESI 300
                9***********88999975 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0087
  PF13516.1   1 lknLtsLdLsnNq.igdeG 18 
                ++++ sL++ ++  ++de 
   MMETSP1325-20131115|45_1 307 CPKIISLNVRDCRsLTDES 325
                99**********8899986 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.59
  PF13516.1   1 lknLtsLdLsnN 12 
                ++++ sL++ ++
   MMETSP1325-20131115|45_1 333 CPKIISLNVRGT 344
                99******9876 PP

>> PF09235.5  Ste50p, sterile alpha motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.022   1.5e+02      37      61 ..     254     277 ..     245     283 .. 0.87
   2 ?    6.7   0.1   0.00092       6.3      43      61 ..     286     304 ..     281     311 .. 0.83
   3 ?    4.3   0.1    0.0052        36      44      62 ..     313     331 ..     309     340 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.022
                ----HHHHHHHHHHHT----HHHHH CS
  PF09235.5  37 tGsvLseltLqDCkeLcdddlkkai 61 
                 G +++e+  + C  L d+++  a+
   MMETSP1325-20131115|45_1 254 HGALVKEVVFKGCCKLMDGSIV-AV 277
                6999****************97.55 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.00092
                HHHHHHHHHT----HHHHH CS
  PF09235.5  43 eltLqDCkeLcdddlkkai 61 
                 l +qDC+ L+d+++   +
   MMETSP1325-20131115|45_1 286 SLNVQDCRSLTDESILAVV 304
                5789**********98555 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.0052
                HHHHHHHHT----HHHHHH CS
  PF09235.5  44 ltLqDCkeLcdddlkkaik 62 
                l + DC+ L+d+++   +k
   MMETSP1325-20131115|45_1 313 LNVRDCRSLTDESILTVVK 331
                6789*********988777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (654 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       813  (0.0594646); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.12u 0.46s 00:00:01.58 Elapsed: 00:00:00.79
# Mc/sec: 1983.82
//
Query:       MMETSP1325-20131115|54_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-44  150.0   1.4    5.7e-44  149.8   0.9    1.0  1  PF08760.6 Domain of unknown function (DUF1793)


Domain annotation for each model (and alignments):
>> PF08760.6  Domain of unknown function (DUF1793)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.8   0.9   4.2e-48   5.7e-44      22     170 ..       2     148 ..       1     149 [. 0.98

  Alignments for each domain:
  == domain 1    score: 149.8 bits;  conditional E-value: 4.2e-48
  PF08760.6  22 yrkiaeeyikkweelaisrdgthakLaydkegswsllYnlyaDkllkln.lvpeevykmqsafYktvqqkyGlpLDsrheytksdWelfaaavaskktrkellekvakfvnetktdvpltDlyetetgklpegiefkaRpvvGghfalla 170
                y++ a+++ ++w elai+++g+h+k++yd ++s+sl+Yn++  ++l+l+  ++++v++m++afY+t+ ++yG+pLD+r+++tk dW++++aa+ + ++++++ ++ ++f+++t+++vpl+D+  t+t ++++   f+aRpv+Gg +a+l+
   MMETSP1325-20131115|54_1   2 YSSKASQFYDEWLELAIASSGDHYKMEYDLDDSFSLKYNILFQRILELDgPFEDSVIEMENAFYQTKLNAYGVPLDNRADFTKLDWSMWVAAMGTPEQFDNITSATWAFADSTTDRVPLSDWTYTSTPTMAG---FQARPVMGGIYAKLL 148
                8999********************************************846********************************************************************************9...*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.47s 00:00:00.88 Elapsed: 00:00:00.72
# Mc/sec: 522.54
//
Query:       MMETSP1325-20131115|56_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.69
# Mc/sec: 774.47
//
Query:       MMETSP1325-20131115|49_1  [L=629]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.99u 0.40s 00:00:01.39 Elapsed: 00:00:00.84
# Mc/sec: 1794.41
//
Query:       MMETSP1325-20131115|59_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   14.6   0.0       0.12   12.6   0.0    2.0  1  PF14083.1 PGDYG protein


Domain annotation for each model (and alignments):
>> PF14083.1  PGDYG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   8.5e-06      0.12       3      35 ..       2      34 ..       1     115 [. 0.81

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 8.5e-06
  PF14083.1  3 nryepGdaivtaetGdrWvvsrdrfdakyvakr 35
               n  + Gd iv+  +G+++++s + f+ +y   +
   MMETSP1325-20131115|59_1  2 NIVQVGDVIVANPAGEQYAMSMENFKLRYAFDN 34
               56789***********************97654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.45s 00:00:00.90 Elapsed: 00:00:00.76
# Mc/sec: 469.81
//
Query:       MMETSP1325-20131115|58_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.7   0.0      0.036   13.7   0.0    1.1  1  PF12064.3 Domain of unknown function (DUF3544)


Domain annotation for each model (and alignments):
>> PF12064.3  Domain of unknown function (DUF3544)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.6e-06     0.036      87     121 ..      22      56 ..       1      60 [. 0.80

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.6e-06
  PF12064.3  87 sskqekssttGsilnlnldrskaemdlkelsesvq 121
                + k +  s   s++nlnl r+k e ++k+l +s+ 
   MMETSP1325-20131115|58_1  22 KLKGNLESVPKSVINLNLARTKIEGNIKDLPQSIT 56 
                556666777889******************99984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.44s 00:00:00.74 Elapsed: 00:00:00.82
# Mc/sec: 181.19
//
Query:       MMETSP1325-20131115|60_1  [L=560]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-21   74.4   3.4    9.3e-21   74.4   2.4    3.0  2  PF01145.20 SPFH domain / Band 7 family
  ------ inclusion threshold ------
      0.012   15.0   1.0      0.012   15.0   0.7    2.3  3  PF13421.1  SPFH domain-Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   2.4   1.4e-24   9.3e-21       1     176 [.      88     314 ..      88     320 .. 0.81
   2 ?   -6.2  10.2         2   1.4e+04     117     178 ..     355     416 ..     317     431 .. 0.69

  Alignments for each domain:
  == domain 1    score: 74.4 bits;  conditional E-value: 1.4e-24
  PF01145.20   1 ktvepgevgvvvrfGkvkr.........vlepGlhfklPfgekvtvvstrvqtldvsdesvtvptkDglnvtvdvtvryrv..sdakkliaavaqeeenlenllrrllesalrevlsqmtldeil.....................snrselaaelknelneqlqkyg.........................ievvdvritdvdpppevkqalakkqaaeaeaaeaeiarae 176
                 +tv++g +++v +fG++++         ++++G+h+  P+++++++v  + +++d +     v+tkD++++++dv v++r+  +d+k+++ +v  ++++le  l++ +++a++++  + t  +++                     + +++ a+e+k   +e+l++ +                         ie++dv i+dv++p +++++l++k + + +++ a+  +++
    MMETSP1325-20131115|60_1  88 FTVPEGFYALVSNFGRIVDydgpngpqdTWPAGFHWGHPLKKVLYLVTKQAIVFDAPC--RGVLTKDNVSIHIDVAVVFRIleKDVKQFAVKV--NPKDLEIRLQAQVDQAVKNLGREITTRDAYglrsvrtttlegkgtdaeemeA-AEQHAEEVKGMTQEELEMAQmaqvkgasatqnmklalnrafhvdgIEITDVIIKDVTLPVSIQRQLEEKTNVDSRNK-AQRMQQK 314
                 58********************************************************..*********************************..*********************9999999998888888878776666555530.344444444444444444444444444444444444444444444*************************9999994.4433333 PP

  == domain 2    score: -6.2 bits;  conditional E-value: 2
  PF01145.20 117 rselaaelknelneqlqkygievvdvritdvdpppevkqalakkqaaeaeaaeaeiaraeae 178
                  ++ +ael n+l e  +k  iev+ ++   +   +e +q + +  +a++ +a+ae++r e+e
    MMETSP1325-20131115|60_1 355 LQKAKAELNNQLEEIRRKAEIEVEAIKQDTALQKAESEQVVKATLTAHEAQAKAEAQRVETE 416
                 56778899999999999999****77755555555666666666666666656666666665 PP

>> PF13421.1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.7   1.7e-06     0.012     139     209 ..     236     302 ..     211     304 .. 0.72
   2 ?   -2.6   0.4      0.43   2.9e+03     132     182 ..     324     374 ..     317     407 .. 0.48
   3 ?   -3.2   0.2      0.63   4.3e+03     148     188 ..     393     435 ..     360     454 .. 0.59

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.7e-06
  PF13421.1 139 slivtrfsdllkeskipvldlaanseelseklreaikkelaeyGleleellienislpeevekaldkrssm 209
                + ++   ++ l+ ++++ ++ a    + +++++ a+++ ++  G+e++++ i+++ lp +++++l+++++ 
   MMETSP1325-20131115|60_1 236 EEVKGMTQEELEMAQMAQVKGA----SATQNMKLALNRAFHVDGIEITDVIIKDVTLPVSIQRQLEEKTNV 302
                4444444444444444444444....4456677789999****************************9986 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.43
  PF13421.1 132 eiseqlrslivtrfsdllkeskipvldlaanseelseklreaikkelaeyG 182
                e+ ++l++   +++s++ +e    v  ++ + ++  ++l++++++  ++  
   MMETSP1325-20131115|60_1 324 EVIQKLKQSNSEAISQAEGERDRDVNAVTVELQKAKAELNNQLEEIRRKAE 374
                566666666655555555555444433333333333333333333223333 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 0.63
  PF13421.1 148 llkeskipvldla..anseelseklreaikkelaeyGleleel 188
                 + ++++++ + +  a+ +++ ++ ++ +k+++a+  le  ++
   MMETSP1325-20131115|60_1 393 QVVKATLTAHEAQakAEAQRVETETEAYVKTTMARAELESAKF 435
                3444444444333003344555555556666665555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1799  (0.131583); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.07u 0.46s 00:00:01.53 Elapsed: 00:00:01.11
# Mc/sec: 1208.97
//
Query:       MMETSP1325-20131115|57_1  [L=1273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-16   58.3   8.1    1.8e-10   40.3   2.3    2.9  2  PF00397.21 WW domain
    7.6e-08   32.6   6.8    7.6e-08   32.6   4.7    5.0  4  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
    2.7e-05   23.0   1.6    2.7e-05   23.0   1.1    3.2  3  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
      0.024   14.0   0.0      0.062   12.7   0.0    1.7  1  PF01011.16 PQQ enzyme repeat
       0.21   11.1   3.4       0.42   10.1   2.4    1.5  1  PF05843.9  Suppressor of forked protein (Suf)
       0.52    9.2   5.1       0.98    8.3   3.6    1.3  1  PF01803.11 LIM-domain binding protein


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.1   2.4e-07   0.00054       5      31 .]      26      54 ..      24      54 .. 0.77
   2 !   40.3   2.3   8.1e-14   1.8e-10       3      31 .]      65      93 ..      63      93 .. 0.90

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 2.4e-07
                EE.E.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21  5 We.ersddd.dGrvYYyNheTgetqWekP 31
                W+ ++++ d     Y++N+ T+et+We P
    MMETSP1325-20131115|57_1 26 WTrVVTELDgRDVAYFHNPVTNETSWELP 54
                66444445555668*************99 PP

  == domain 2    score: 40.3 bits;  conditional E-value: 8.1e-14
                -SEEE.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21  3 pgWeersddd.dGrvYYyNheTgetqWekP 31
                +gWee++d + + rvYYyN++TgetqW +P
    MMETSP1325-20131115|57_1 65 GGWEEHYD-PaSSRVYYYNAATGETQWKRP 93
                67*****6.669*****************9 PP

>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   4.7   3.3e-11   7.6e-08      65     141 ..     127     232 ..      55     235 .. 0.69
   2 ?   -1.4   0.0         1   2.3e+03      99     128 ..     603     663 ..     546     670 .. 0.56
   3 ?  -12.5  16.0         6   1.4e+04      47     100 ..     969    1018 ..     832    1033 .. 0.71
   4 ?   -1.7   0.2       1.2   2.8e+03      65      65 ..    1200    1200 ..    1137    1248 .. 0.56

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 3.3e-11
  PF10152.4  65 aarrsggpppppg.......araeaaaqeaeaaraetpaeqe.................................pealaegrltvrkdpryakYfkmlklgVpaeavknKmqaeGl 141
                + +++++ p++++       a+a aa++ +           +                                  + +a+ +  +++dp+y++Yf+m+++gVp +av  + +++G 
   MMETSP1325-20131115|57_1 127 EITTASDSPADADpvpqrntASALAASPLS-----------AeetkdetemsetkeeeldtftcgicletktrrgRPHVAPSDYATSNDPKYSRYFQMISVGVPLQAVAIQFKLDGA 232
                222222222222233333332222222222...........02222223333467788999**************77789***********************************96 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 1
  PF10152.4  99 e...............................pealaegrltvrkdpryakYfkmlklgVp 128
                                                 ++++    + +++ r+a+  +ml+ + p
   MMETSP1325-20131115|57_1 603 DflgddvleipsrvdamaveqadrlyawlaaqDNQTELRAERAARHRRFAETWEMLHARQP 663
                1333333333333333333334444444433345566677777789999988888887755 PP

  == domain 3    score: -12.5 bits;  conditional E-value: 6
  PF10152.4   47 idgleeledqdelpappaaarrsggpppppgaraeaaaqeaeaaraetpaeqep 100 
                 +++l + + ++  p  + +++ +++ppp ++     + q++++++++++++q+p
   MMETSP1325-20131115|57_1  969 APNLTTRQHEEWSPRRQLRSQAQQSPPPLQQ----QQRQQQQQQQQPPQQQQPP 1018
                 3333333332222222222222222222222....2222222222222222222 PP

  == domain 4    score: -1.7 bits;  conditional E-value: 1.2
  PF10152.4   65 a 65  
                 +
   MMETSP1325-20131115|57_1 1200 R 1200
                 1 PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   4.3       1.9   4.2e+03      17      25 ..     456     464 ..     446     465 .. 0.84
   2 ?   -2.2   0.2      0.91   2.1e+03       7      12 ..     490     495 ..     490     496 .. 0.83
   3 !   23.0   1.1   1.2e-08   2.7e-05       4      30 .]    1031    1057 ..    1028    1057 .. 0.96

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1.9
  PF00641.13  17 wstkCvaCq 25 
                 +s++C++Cq
    MMETSP1325-20131115|57_1 456 SSVHCFNCQ 464
                 799*****8 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.91
  PF00641.13   7 CskClv 12 
                 C+kC+ 
    MMETSP1325-20131115|57_1 490 CPKCGI 495
                 ****85 PP

  == domain 3    score: 23.0 bits;  conditional E-value: 1.2e-08
  PF00641.13    4 dWdCskClvqNfawstkCvaCqapkpd 30  
                  dW Cs+C++ N+ + ++C++C++ +p+
    MMETSP1325-20131115|57_1 1031 DWSCSACTFLNPMSGVRCEMCDTARPP 1057
                  8************************95 PP

>> PF01011.16  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.7e-05     0.062       7      31 ..      73      97 ..      70     103 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.7e-05
                STTTEEEEEEST---EEEEEESSSC CS
  PF01011.16  7 tfdGylyAlDakTGkvlWkfktggp 31
                +++ ++y ++a+TG+  Wk +t ++
    MMETSP1325-20131115|57_1 73 PASSRVYYYNAATGETQWKRPTAPQ 97
                56789***************99876 PP

>> PF05843.9  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.4   0.00018      0.42     210     248 ..     964    1022 ..     806    1042 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00018
  PF05843.9  210 e.....................grqleqqkksesakseeaasqsqkqqqqqpaplpreiv 248 
                 +                      r + qq+  + ++++++ +q+q+q +qq++p p++  
   MMETSP1325-20131115|57_1  964 RnhvsapnlttrqheewsprrqLRSQAQQSPPPLQQQQRQQQQQQQQPPQQQQPPPNA-Q 1022
                 2333333333333344544333444444444555555555444444444444443333.3 PP

>> PF01803.11  LIM-domain binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.6   0.00043      0.98     132     187 ..     971    1016 ..     965    1034 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00043
  PF01803.11  132 dfeirsheeyiprslleekvaelskivkktkslk.sdqkqspelsknsklkqqksqq 187 
                  ++++r+hee  pr++l ++++++ + +++ + ++ +   q++++ ++        qq
    MMETSP1325-20131115|57_1  971 NLTTRQHEEWSPRRQLRSQAQQSPPPLQQQQRQQqQ---QQQQPPQQ--------QQ 1016
                  6899***************99877665322222211...11111111........11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1033  (0.0755559); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.95u 0.51s 00:00:02.46 Elapsed: 00:00:01.52
# Mc/sec: 2006.95
//
Query:       MMETSP1325-20131115|65_1  [L=468]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-18   65.8   0.0    3.7e-18   65.4   0.0    1.2  1  PF00790.14 VHS domain
    8.8e-06   25.4   0.3    1.7e-05   24.5   0.2    1.4  1  PF03127.9  GAT domain


Domain annotation for each model (and alignments):
>> PF00790.14  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.0   5.4e-22   3.7e-18      39     141 .]       2     102 ..       1     102 [. 0.92

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 5.4e-22
                 ---HCHHHHHHHHHT-SSHHHHHHHHHHHHHHHHH---HHHHHHTSHHHHHHHHHCC-TTT----S-HHHHHHHHHHHHHHH-....TT-HHHHHHHHHHHH-- CS
  PF00790.14  39 agpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekknsklakvkkkvlelleeWadaf.knkpelkkisdvykllkrkg 141
                 agp +a++++++k++s+np+v+ laL+l+d+ +kNc  ++h  ++skef+ ++v+l+  k   +   v++ +l+l+++W  +f ++++ l   +++y +l+ kg
    MMETSP1325-20131115|65_1   2 AGPSQAIKCLRRKLKSDNPKVITLALQLVDSTIKNCSAPMHAAVGSKEFMGDMVNLTDGKRGWE---VRELALKLIQSWGIEFaSKSDTLPLFHQTYTNLRVKG 102
                 689****************************************************777777666...****************666677889999999999886 PP

>> PF03127.9  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.2   2.6e-09   1.7e-05       3      85 ..     139     221 ..     137     225 .. 0.87

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 2.6e-09
  PF03127.9   3 pekvaklrseleeVkesvklLsemLqeydpgeesqsdaellqeLyercekmqprifrli....setedndalaellavndeLnrvle 85 
                 ++++kl+++l  V+e+vkl  emL e +  e   +d e+l+e    +e+ +pr ++li    +   d+ +l+  la+nd+L ++le
   MMETSP1325-20131115|65_1 139 ADDLEKLKNDLVVVEEKVKLCREMLPESRGIE---QD-EALSEVIGFLEACKPRMVDLIeagmQGMLDEGLLGMALAINDDLIKTLE 221
                68899********************8765443...34.58888889999999*******99888899999************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.39s 00:00:01.14 Elapsed: 00:00:00.85
# Mc/sec: 1319.41
//
Query:       MMETSP1325-20131115|69_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-07   29.8   1.7      4e-07   29.8   1.2    1.5  2  PF00754.20 F5/8 type C domain


Domain annotation for each model (and alignments):
>> PF00754.20  F5/8 type C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.18   2.5e+03      38      51 ..      38      51 ..      28      56 .. 0.76
   2 !   29.8   1.2   2.9e-11     4e-07       4      84 ..      52     136 ..      49     150 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.18
                EEEEEEEEEEEEEE CS
  PF00754.20 38 qwlqvdLgkekkit 51
                 wl  dL++  ++ 
    MMETSP1325-20131115|69_1 38 RWLDADLQEISTMG 51
                69999999988765 PP

  == domain 2    score: 29.8 bits;  conditional E-value: 2.9e-11
                 ESTTSSTTSSGG.GGGGGTTTTTTSSEECSS..SSSTEEEEEEE..EEEEEEEEEEEEE-BSTST.SEEEEEEEEEESSSSSEEEEE CS
  PF00754.20   4 asseesgnygag.pasaaldgnkstaWsskw..gdapqwlqvdL..gkekkitgvvtqgrqdggn.gyvksykiqysddgenWtevk 84 
                 a++  sg+++++ + +a  d+++st+Wss+   + ++ wl vd+  g++  +   ++  +++  + ++v    ++ysddge+W+   
    MMETSP1325-20131115|69_1  52 ATTIASGEHASWsNSAAGMDNDESTYWSSNLkaETEDRWLGVDFgeGAAVAVAEAEVMQYNH--EvYRVFRAYLEYSDDGEKWELQD 136
                 6777889999998888899999*******77779**********555667777777777777..457****************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.70
# Mc/sec: 568.28
//
Query:       MMETSP1325-20131115|67_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.83
# Mc/sec: 430.19
//
Query:       MMETSP1325-20131115|70_1  [L=786]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0033   16.9   3.7      0.011   15.3   0.3    3.1  3  PF03840.9 Preprotein translocase SecG subunit


Domain annotation for each model (and alignments):
>> PF03840.9  Preprotein translocase SecG subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1     0.036   4.9e+02       9      32 ..     380     403 ..     379     415 .. 0.82
   2 !   15.3   0.3   7.8e-07     0.011       7      57 ..     432     480 ..     427     496 .. 0.78
   3 ?   -4.0   0.0      0.85   1.2e+04      19      29 ..     600     610 ..     599     611 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.036
  PF03840.9   9 vivailLivlVLlQsgkgaglgga 32 
                v+  ++Li++ LlQ    a l+g 
   MMETSP1325-20131115|70_1 380 VLAPLALILFSLLQDAPFASLAGG 403
                566799********9988888774 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 7.8e-07
  PF03840.9   7 llvivailLivlVLlQsgkgaglggafgggasqslfgsrkaenfLtklTav 57 
                  v+va++  v+ ++Qs k++g++ a+g +    lfg   a++  ++lTa 
   MMETSP1325-20131115|70_1 432 AVVVVALVTPVVYMMQSAKSSGMSLALGASI--LLFGELAARRAHSRLTAR 480
                5567777777788**********99866665..8**********9999985 PP

  == domain 3    score: -4.0 bits;  conditional E-value: 0.85
  PF03840.9  19 VLlQsgkgagl 29 
                VLl ++k++g+
   MMETSP1325-20131115|70_1 600 VLLKKEKSDGV 610
                9*******996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (786 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       830  (0.060708); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.19u 0.40s 00:00:01.59 Elapsed: 00:00:00.87
# Mc/sec: 2164.98
//
Query:       MMETSP1325-20131115|75_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-14   50.5  12.9    0.00022   20.6   0.3    4.7  5  PF12799.2  Leucine Rich repeats (2 copies)
    5.4e-08   32.3  14.9     0.0014   18.1   0.2    3.5  3  PF13855.1  Leucine rich repeat
    6.1e-07   28.7  20.0     0.0059   16.4   0.8    5.7  7  PF13516.1  Leucine Rich repeat
    0.00013   21.4  12.4        3.3    8.2   0.3    6.9  7  PF13504.1  Leucine rich repeat
     0.0012   18.4  12.2        1.8    8.8   0.4    6.3  6  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.3   7.2e-07     0.002       2      38 ..       2      41 ..       1      50 [. 0.84
   2 !    7.0   0.0    0.0015       4.2      20      42 ..      47      70 ..      38      71 .. 0.83
   3 !   14.8   0.1   5.3e-06     0.015       2      37 ..      52      89 ..      51     100 .. 0.82
   4 !    8.8   0.1   0.00039       1.1       1      38 [.      76     115 ..      76     122 .. 0.82
   5 !   20.6   0.3   8.2e-08   0.00022       2      34 ..     124     157 ..     123     176 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 7.2e-07
  PF12799.2  2 nLevLdLsnNnIkdlppe...lanLpnLktLnLsnNpisd 38
               +Le+L+L  + ++d +     l++L++L++LnL++  i+d
   MMETSP1325-20131115|75_1  2 KLESLSLFFCDVSDSEQGmkgLSQLTSLTELNLDSRDITD 41
               7************97754455************9988887 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0015
  PF12799.2 20 lanLpnLktLnLsnN.pisdlsaL 42
               la L +Lk+L+L +  +++dlsaL
   MMETSP1325-20131115|75_1 47 LAPLLKLKVLDLFSAyRLTDLSAL 70
               78889*******99967****998 PP

  == domain 3    score: 14.8 bits;  conditional E-value: 5.3e-06
  PF12799.2  2 nLevLdLsn.NnIkdlppe.lanLpnLktLnLsnNpis 37
               +L+vLdL +  +++dl++  +++Lp L+ L L + +i+
   MMETSP1325-20131115|75_1 52 KLKVLDLFSaYRLTDLSALiISGLPELTKLELCGGRIT 89
               7999**888679******747*************9998 PP

  == domain 4    score: 8.8 bits;  conditional E-value: 0.00039
  PF12799.2   1 tnLevLdLsnNnIk..dlppelanLpnLktLnLsnN.pisd 38 
                + L++L L + +I+   l+  l  L +L++L+++ N +i d
   MMETSP1325-20131115|75_1  76 PELTKLELCGGRITgrALEY-LEPLEKLRSLSVAQNtNIGD 115
                57999999999999656999.999*******9976537765 PP

  == domain 5    score: 20.6 bits;  conditional E-value: 8.2e-08
  PF12799.2   2 nLevLdLsnNnIkd..lppelanLpnLktLnLsnN 34 
                nL+ L+Ls+++I++  l++ l+ + nL++L L n+
   MMETSP1325-20131115|75_1 124 NLTDLNLSECRISNagLDN-LSHMINLRSLALVNC 157
                9************766999.999999999966554 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.3   0.00057       1.6      35      58 ..      13      36 ..       1      39 [. 0.67
   2 !   18.1   0.2   5.2e-07    0.0014       2      59 ..      52     110 ..      51     113 .. 0.94
   3 !   14.6   3.7   6.5e-06     0.018       2      59 ..     101     157 ..     100     158 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00057
  PF13855.1 35 nnlksispeafkgLpsLreLnLsg 58
                + ++  ++ +++L+sL+eLnL++
   MMETSP1325-20131115|75_1 13 VSDSEQGMKGLSQLTSLTELNLDS 36
               45567777889***********87 PP

  == domain 2    score: 18.1 bits;  conditional E-value: 5.2e-07
  PF13855.1   2 nLkeLdLsnN.rlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59 
                +Lk+LdL +  rl++++  + +gl+ L++L L g +++    e ++ L++Lr+L++ +N
   MMETSP1325-20131115|75_1  52 KLKVLDLFSAyRLTDLSALIISGLPELTKLELCGGRITGRALEYLEPLEKLRSLSVAQN 110
                59999*99988***************************9999************99977 PP

  == domain 3    score: 14.6 bits;  conditional E-value: 6.5e-06
  PF13855.1   2 nLkeLdLsnNrlkvipdgaFkgl.snLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59 
                +L++L + +N  ++i+d+ +  l  nL+ L+Ls++++++   + ++++ +Lr+L L ++
   MMETSP1325-20131115|75_1 101 KLRSLSVAQN--TNIGDNGLTLLsANLTDLNLSECRISNAGLDNLSHMINLRSLALVNC 157
                7999999999..8897755554459******************************9987 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0028       7.8       3      24 .]       2      25 ..       1      25 [. 0.90
   2 !    6.7   0.1     0.003       8.1       1      22 [.      26      47 ..      26      48 .. 0.85
   3 ?   -0.1   0.0      0.47   1.3e+03       3      17 ..      52      67 ..      50      77 .. 0.66
   4 ?   -1.9   0.0       1.8   4.9e+03       2      21 ..      76      95 ..      75      97 .. 0.66
   5 !    8.8   0.2   0.00064       1.8       2      22 ..     100     121 ..      99     123 .. 0.75
   6 !   16.4   0.8   2.1e-06    0.0059       3      23 ..     124     144 ..     122     145 .. 0.94
   7 ?   -2.3   0.0       2.4   6.7e+03       3      12 ..     148     157 ..     146     166 .. 0.69

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0028
  PF13516.1  3 nLtsLdLsnNqigd..eGlsaLan 24
               +L+sL L +++++d  +G+++L++
   MMETSP1325-20131115|75_1  2 KLESLSLFFCDVSDseQGMKGLSQ 25
               69**********998899999986 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.003
  PF13516.1  1 lknLtsLdLsnNqigdeGlsaL 22
               l++Lt+L+L + +i+d  +  L
   MMETSP1325-20131115|75_1 26 LTSLTELNLDSRDITDRSIACL 47
               689*******999999877766 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.47
  PF13516.1  3 nLtsLdL.snNqigde 17
               +L++LdL s   ++d 
   MMETSP1325-20131115|75_1 52 KLKVLDLfSAYRLTDL 67
               5889997454456654 PP

  == domain 4    score: -1.9 bits;  conditional E-value: 1.8
  PF13516.1  2 knLtsLdLsnNqigdeGlsa 21
               + Lt L L +  i++  l++
   MMETSP1325-20131115|75_1 76 PELTKLELCGGRITGRALEY 95
               56888888776676666655 PP

  == domain 5    score: 8.8 bits;  conditional E-value: 0.00064
  PF13516.1   2 knLtsLdLsnN.qigdeGlsaL 22 
                 +L+sL + +N +igd+Gl  L
   MMETSP1325-20131115|75_1 100 EKLRSLSVAQNtNIGDNGLTLL 121
                5799999975527*****9766 PP

  == domain 6    score: 16.4 bits;  conditional E-value: 2.1e-06
  PF13516.1   3 nLtsLdLsnNqigdeGlsaLa 23 
                nLt+L+Ls + i++ Gl +L+
   MMETSP1325-20131115|75_1 124 NLTDLNLSECRISNAGLDNLS 144
                9****************9997 PP

  == domain 7    score: -2.3 bits;  conditional E-value: 2.4
  PF13516.1   3 nLtsLdLsnN 12 
                nL+sL L n+
   MMETSP1325-20131115|75_1 148 NLRSLALVNC 157
                8898866555 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0       0.2   5.4e+02       2      12 ..       2      12 ..       1      26 [. 0.83
   2 ?    2.1   0.0      0.12   3.3e+02       1       9 [.      27      35 ..      27      44 .. 0.83
   3 ?    5.1   0.0     0.013        35       2      16 ..      52      67 ..      52      68 .. 0.85
   4 ?   -1.3   0.0       1.7   4.6e+03       2      10 ..      77      85 ..      76      90 .. 0.71
   5 ?    1.7   0.1      0.17   4.6e+02       2      12 ..     101     111 ..     100     122 .. 0.67
   6 !    8.2   0.3    0.0012       3.3       2      14 ..     124     136 ..     123     144 .. 0.87
   7 ?    4.4   0.0     0.022        59       2      13 ..     148     160 ..     147     173 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.2
  PF13504.1  2 nLkeLdLsgnr 12
               +L+ L+L  ++
   MMETSP1325-20131115|75_1  2 KLESLSLFFCD 12
               6999***9996 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.12
  PF13504.1  1 pnLkeLdLs 9 
               ++L+eL+L 
   MMETSP1325-20131115|75_1 27 TSLTELNLD 35
               69*****96 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.013
  PF13504.1  2 nLkeLdLsgnr.LtsL 16
               +Lk+LdL + + Lt+L
   MMETSP1325-20131115|75_1 52 KLKVLDLFSAYrLTDL 67
               69*****998779998 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 1.7
  PF13504.1  2 nLkeLdLsg 10
                L++L L g
   MMETSP1325-20131115|75_1 77 ELTKLELCG 85
               599999865 PP

  == domain 5    score: 1.7 bits;  conditional E-value: 0.17
  PF13504.1   2 nLkeLdLsgnr 12 
                +L+ L+++ n 
   MMETSP1325-20131115|75_1 101 KLRSLSVAQNT 111
                69999997663 PP

  == domain 6    score: 8.2 bits;  conditional E-value: 0.0012
  PF13504.1   2 nLkeLdLsgnrLt 14 
                nL++L+Ls +r+ 
   MMETSP1325-20131115|75_1 124 NLTDLNLSECRIS 136
                9*********975 PP

  == domain 7    score: 4.4 bits;  conditional E-value: 0.022
  PF13504.1   2 nLkeLdLsgnr.L 13 
                nL+ L L +++  
   MMETSP1325-20131115|75_1 148 NLRSLALVNCErV 160
                8*********744 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.14   3.7e+02       1      14 [.       2      15 ..       2      27 .. 0.80
   2 ?    2.0   0.0      0.11   2.9e+02       1      14 [.      28      41 ..      28      50 .. 0.78
   3 ?    4.5   0.0     0.016        44       1      20 [.      52      73 ..      52      97 .. 0.85
   4 ?    1.6   0.1      0.14   3.9e+02       1      14 [.     101     115 ..     101     123 .. 0.77
   5 !    8.8   0.4   0.00065       1.8       1      21 [.     124     145 ..     124     146 .. 0.78
   6 ?    1.9   0.0      0.12   3.2e+02       1      14 [.     148     162 ..     148     177 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.14
                TESEEEETSSBCBC CS
  PF00560.28  1 nLeeLdLsgNnlts 14
                +Le+L+L ++ +++
    MMETSP1325-20131115|75_1  2 KLESLSLFFCDVSD 15
                69*****9998875 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.11
                TESEEEETSSBCBC CS
  PF00560.28  1 nLeeLdLsgNnlts 14
                +L+eL+L++  +t+
    MMETSP1325-20131115|75_1 28 SLTELNLDSRDITD 41
                69*****9877775 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.016
                TESEEEETSS.BCBCHHHH.HH CS
  PF00560.28  1 nLeeLdLsgN.nltslpps.ls 20
                +L++LdL +  +lt+l+   +s
    MMETSP1325-20131115|75_1 52 KLKVLDLFSAyRLTDLSALiIS 73
                699******9999997765444 PP

  == domain 4    score: 1.6 bits;  conditional E-value: 0.14
                 TESEEEETSS.BCBC CS
  PF00560.28   1 nLeeLdLsgN.nlts 14 
                 +L++L++  N n+ +
    MMETSP1325-20131115|75_1 101 KLRSLSVAQNtNIGD 115
                 699999999999874 PP

  == domain 5    score: 8.8 bits;  conditional E-value: 0.00065
                 TESEEEETSSBCBC..HHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnlts..lppslsn 21 
                 nL+ L+Ls +++++  l + ls+
    MMETSP1325-20131115|75_1 124 NLTDLNLSECRISNagLDN-LSH 145
                 89***********845444.665 PP

  == domain 6    score: 1.9 bits;  conditional E-value: 0.12
                 TESEEEETSS.BCBC CS
  PF00560.28   1 nLeeLdLsgN.nlts 14 
                 nL++L L ++ ++t 
    MMETSP1325-20131115|75_1 148 NLRSLALVNCeRVTR 162
                 89********88873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.43s 00:00:00.96 Elapsed: 00:00:00.66
# Mc/sec: 798.79
//
Query:       MMETSP1325-20131115|73_1  [L=482]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.7e-66  222.1  10.7    1.3e-65  221.7   7.4    1.2  1  PF04258.8 Signal peptide peptidase
     0.0041   16.1   5.7     0.0041   16.1   4.0    3.2  3  PF06550.6 Protein of unknown function (DUF1119)


Domain annotation for each model (and alignments):
>> PF04258.8  Signal peptide peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.7   7.4   1.9e-69   1.3e-65       8     298 .]      68     354 ..      61     354 .. 0.92

  Alignments for each domain:
  == domain 1    score: 221.7 bits;  conditional E-value: 1.9e-69
  PF04258.8   8 tidkkeaiifpisaslvllllylffkklskelvavevllvlftvlgvvqalaslllpvviallkkvglveiekkklkllvekkdgklfkgefkaaelvalllciviavlwyvlrke.h..wilqdilglalciavieilrlpslkvgalLLlglflYDifwVFvskylfgtsvMveVAkgpadaae................klPillklpqlnslegeaskfsiLGlGDivlPGllialllrfdilkkkksriYfvvtlvaYglGLlitivalalfkaaQPALLYlvPatLltllllallrgelkklwn 298
                +++ ++a+ f+++as vll+l+++  +l+        ++v+f++  + +  + ll p++  l+     ++ +++ ++l        + +g++++ + +++   +++av+w+++r + +  ++lqd++g++lc+ +++++r  ++kv+alLL+++flYDif+VF+s+ +f++svMv+VA+g+  +a+                +lP+ll lp+  +    ++ +++LGlGDivlPGll+a++ r+d++   +    f+  + +Y +GL+++ va+++++ +QPALLYlvP+tL++l+l a   g lk+lwn
   MMETSP1325-20131115|73_1  68 ELTLTHAFGFIVVASSVLLILFYIDLYLF--------VTVMFCISAASSTGQVLLRPMFAWLCG----PRSRQELVEL--------PWIGSVSTLDGLCTGTGVFLAVTWFIVRTTaDwaFVLQDLFGMCLCVLFLSVIRFSNMKVAALLLTMAFLYDIFFVFISPIFFSESVMVKVATGNQPTADpdycekypsdsdcqstELPMLLLLPRIDD---YTGGYTMLGLGDIVLPGLLVAFAARYDVSIGARIPWNFLLMVAGYSVGLMMANVAVYVMEMGQPALLYLVPCTLGVLTLKARREGTLKDLWN 354
                678899***************99988854........899*****9997667777766666544....5677888877........99***************************9666679**********************************************************8888779*************************955...789***************************9999999******************************************************8 PP

>> PF06550.6  Protein of unknown function (DUF1119)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.9       0.2   1.4e+03      65      90 ..      80     102 ..      70     120 .. 0.49
   2 ?   -0.7   2.4     0.081   5.5e+02      97     155 ..     152     210 ..     130     225 .. 0.68
   3 !   16.1   4.0     6e-07    0.0041     201     265 ..     266     330 ..     244     337 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.2
  PF06550.6  65 iylvvvavifyvflvllsiilalagl 90 
                + +    v+  +f++ l ++++++  
   MMETSP1325-20131115|73_1  80 VASS---VLLILFYIDLYLFVTVMFC 102
                2222...3333333333333333332 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.081
  PF06550.6  97 llaialvlllykkpeW.yv.idlaGvilavGvsaliGislgvlaavvllilla.vydaisvy 155
                 la++++++  +  +W +v  dl G++l+v   ++  i ++ + + +ll+ +a +yd   v+
   MMETSP1325-20131115|73_1 152 FLAVTWFIV-RTTADWaFVlQDLFGMCLCVLFLSV--IRFSNMKVAALLLTMAfLYDIFFVF 210
                455555443.3445563442599999998877666..6677777776666655379987766 PP

  == domain 3    score: 16.1 bits;  conditional E-value: 6e-07
  PF06550.6 201 nalfiGlGdavlPsilvvsaalfleseilagieyavllalaGtlvGlvvlsilv.lrgrpaaGlPy 265
                   ++GlGd+vlP +lv+ aa +  s i a i +  ll +aG  vGl++  + v + +  ++ l y
   MMETSP1325-20131115|73_1 266 GYTMLGLGDIVLPGLLVAFAARYDVS-IGARIPWNFLLMVAGYSVGLMMANVAVyVMEMGQPALLY 330
                4569*******************999.6689***************98876543134555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       560  (0.0409596); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.43s 00:00:01.27 Elapsed: 00:00:00.84
# Mc/sec: 1375.05
//
Query:       MMETSP1325-20131115|79_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-05   22.3   0.0     0.0021   16.2   0.0    2.2  1  PF01130.16 CD36 family
  ------ inclusion threshold ------
      0.024   14.1   0.2       0.05   13.1   0.2    1.5  1  PF05545.6  Cbb3-type cytochrome oxidase component FixQ


Domain annotation for each model (and alignments):
>> PF01130.16  CD36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.1e-07    0.0021     371     461 ..     147     255 ..     127     259 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 3.1e-07
  PF01130.16 371 etfldiepttGtplqakkRlqinilvekskg..................isilknlpnvilPllwveesaklddelisqlkkqlvilprivailaivllalglilllla 461
                 ++f+d++p tG   + + R+q n+ ve+s+                   i+++     ++ Pl+w+e + +ld e+  +++   ++l++ + i+ + +l+lg ++++ +
    MMETSP1325-20131115|79_1 147 RSFIDVDPVTGYAARSVRRMQTNLRVERSSLfpyllsdngrcntpsayfIEEVGYGCMMFHPLAWIEDNQYLDYETSARIYYGYFQLRHTIFITFYTALTLGALMIIFG 255
                 589*************************998555444444444443332233333335778*******************************************99875 PP

>> PF05545.6  Cbb3-type cytochrome oxidase component FixQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   7.3e-06      0.05       7      36 ..     239     268 ..     234     272 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.3e-06
  PF05545.6   7 qgfarswgtlllfvfFigivfWayspkrkk 36 
                 +f+ ++ + +l+++F g  ++ y++k +k
   MMETSP1325-20131115|79_1 239 ITFYTALTLGALMIIFGGAAWHHYNRKERK 268
                5789999999**************888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.57
# Mc/sec: 1140.34
//
Query:       MMETSP1325-20131115|80_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.46s 00:00:00.86 Elapsed: 00:00:00.67
# Mc/sec: 686.72
//
Query:       MMETSP1325-20131115|82_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.63
# Mc/sec: 357.55
//
Query:       MMETSP1325-20131115|81_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       704  (0.0514921); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.60
# Mc/sec: 782.81
//
Query:       MMETSP1325-20131115|84_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.8    6.6  13.2        9.2    5.9   9.1    1.4  1  PF14235.1 Domain of unknown function (DUF4337)


Domain annotation for each model (and alignments):
>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   9.1   0.00067       9.2      41     100 ..      85     146 ..      79     192 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00067
  PF14235.1  41 WafYQAksikqtlaelaaelleleaks..aaelkkkiekykkekkrikseakeleakakeae 100
                +  +QAk++k + ael a++++l+ ++  +a+++++ e +++  +   +e+++ ++ a++  
   MMETSP1325-20131115|84_1  85 FEEWQAKREKLKQAELDAQQAQLDVDEseEARIERDFEIWAEARAVRAREQEQTQQSATDGA 146
                5679******************9988888999999999999988888888888888775433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1108  (0.0810415); expected 273.4 (0.02)
Passed bias filter:                      537  (0.0392774); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.41s 00:00:00.97 Elapsed: 00:00:00.62
# Mc/sec: 788.48
//
Query:       MMETSP1325-20131115|85_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.64
# Mc/sec: 726.40
//
Query:       MMETSP1325-20131115|78_1  [L=729]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-12   47.3  61.7    0.00089   19.2   4.7    5.5  5  PF07974.8  EGF-like domain
     0.0071   16.1  42.2      0.099   12.5   1.4    5.3  4  PF00008.22 EGF-like domain
  ------ inclusion threshold ------
      0.022   14.7   0.0      0.048   13.6   0.0    1.5  1  PF13692.1  Glycosyl transferases group 1
       0.16   11.7  48.5       0.33   10.7   2.9    4.4  4  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   7.8   1.4e-06    0.0048       1      32 []      27      54 ..      27      54 .. 0.92
   2 !   18.1   4.5   5.9e-07     0.002       7      32 .]     120     145 ..     114     145 .. 0.94
   3 !    7.2   2.7    0.0015         5       1      15 [.     150     161 ..     150     163 .. 0.89
   4 !   10.1   1.4   0.00018      0.63      21      32 .]     183     194 ..     177     194 .. 0.96
   5 !   19.2   4.7   2.6e-07   0.00089       7      32 .]     698     721 ..     689     721 .. 0.91

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.4e-06
  PF07974.8  1 CsadgliCgghGtCvkq.cgkCvCdsgyqGktC 32
               C++    C+g+G C       C C++++qG++C
   MMETSP1325-20131115|78_1 27 CPN---ACSGNGVCSAYdM--CTCYRNFQGADC 54
               985...4********9977..************ PP

  == domain 2    score: 18.1 bits;  conditional E-value: 5.9e-07
  PF07974.8   7 iCgghGtCvkqcgkCvCdsgyqGktC 32 
                +C++ G C++  g+C+C +gy G  C
   MMETSP1325-20131115|78_1 120 ECSNKGLCDRKEGQCECFDGYDGSAC 145
                5********99*************99 PP

  == domain 3    score: 7.2 bits;  conditional E-value: 0.0015
  PF07974.8   1 CsadgliCgghGtCv 15 
                C++    C+ghGtC+
   MMETSP1325-20131115|78_1 150 CPEG---CSGHGTCE 161
                9985...*******8 PP

  == domain 4    score: 10.1 bits;  conditional E-value: 0.00018
  PF07974.8  21 CvCdsgyqGktC 32 
                C+Cd gy+G++C
   MMETSP1325-20131115|78_1 183 CKCDPGYSGADC 194
                ************ PP

  == domain 5    score: 19.2 bits;  conditional E-value: 2.6e-07
  PF07974.8   7 iCgghGtCvkqcgkCvCdsgyqGktC 32 
                +C+g+G+Cv   g+C+C +g++ ++C
   MMETSP1325-20131115|78_1 698 QCSGRGSCV--DGVCECFKGFTMDDC 721
                6********..**********99999 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   4.4     0.017        57       4      31 ..      29      52 ..      27      53 .. 0.90
   2 !    8.9   2.8   0.00039       1.3       5      30 ..     120     142 ..     112     143 .. 0.82
   3 !    7.1   4.4    0.0013       4.6       1      31 [.     150     192 ..     150     193 .. 0.89
   4 !   12.5   1.4   2.9e-05     0.099       5      31 ..     698     719 ..     692     720 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.017
                TTCSS--EEEEECCTEEEEE--TTCTTT CS
  PF00008.22  4 npCsngGtCvdtpgggytCeCpeGytGk 31
                n Cs++G C   +     C+C   ++G 
    MMETSP1325-20131115|78_1 29 NACSGNGVCSAYD----MCTCYRNFQGA 52
                56***********....******99995 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00039
                 TCSS--EEEEECCTEEEEE--TTCTT CS
  PF00008.22   5 pCsngGtCvdtpgggytCeCpeGytG 30 
                  Csn G C + +    +CeC  Gy+G
    MMETSP1325-20131115|78_1 120 ECSNKGLCDRKE---GQCECFDGYDG 142
                 477777777776...**********9 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0013
                 TTTTTCSS--EEEEEC.............CTEEEEE--TTCTTT CS
  PF00008.22   1 CspnpCsngGtCvdtp.............gggytCeCpeGytGk 31 
                 C++ +Cs++GtC   +             g +  C+C +Gy+G 
    MMETSP1325-20131115|78_1 150 CPE-GCSGHGTCEHIEtlagdvgyslwdtGMTMGCKCDPGYSGA 192
                 566.9*********************97777777********95 PP

  == domain 4    score: 12.5 bits;  conditional E-value: 2.9e-05
                 TCSS--EEEEECCTEEEEE--TTCTTT CS
  PF00008.22   5 pCsngGtCvdtpgggytCeCpeGytGk 31 
                  Cs++G Cvd+      CeC +G+t++
    MMETSP1325-20131115|78_1 698 QCSGRGSCVDGV-----CECFKGFTMD 719
                 6**********6.....*******975 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.4e-05     0.048      35     110 ..     307     380 ..     296     398 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.4e-05
  PF13692.1  35 velviiGkgpdelarllepnveflgfveelaellasadvglaplrfgeglplKlleylaaGlPvvasdigaeglpe 110
                ++l+++G+ p +l+ l      + g+ e +a++ a++ v+   ++f+eg+++ +++y+a  +  v+ +i+ +++  
   MMETSP1325-20131115|78_1 307 YSLTFTGN-PGYLKPL-TIDTYLDGYRETVAPVTAGSTVATTVVSFNEGISGEFVDYFASKCTGVVASISSDSIGA 380
                55666666.4466666.446677899999**********************************9999887666654 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   5.8      0.03     1e+02       2      33 ..      26      56 ..      26      71 .. 0.82
   2 ?   10.4   8.4   0.00012      0.43       3      37 ..     121     153 ..     119     157 .. 0.81
   3 ?   10.7   2.9   9.7e-05      0.33       3      32 ..     150     195 ..     148     204 .. 0.83
   4 ?    2.0   3.4     0.052   1.8e+02       3      32 ..     699     722 ..     691     724 .. 0.80

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.03
                -STT-B-CC--B-S----BSBSTTEE---S-E CS
  PF00053.19  2 eCnphgsssssCdsstgqClCkenveGrkCdr 33
                eC+++ s ++ C      C C +n++G +C +
    MMETSP1325-20131115|78_1 26 ECPNACSGNGVCSA-YDMCTCYRNFQGADCSE 56
                58888888899998.778************85 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00012
                 STT-B-CC--B-S----BSBSTTEE---S-E..E--- CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenveGrkCdr..Ckpg 37 
                 C+++g     Cd+++gqC+C ++++G+ C+r  C +g
    MMETSP1325-20131115|78_1 121 CSNKG----LCDRKEGQCECFDGYDGSACQRasCPEG 153
                 55555....9*******************97556666 PP

  == domain 3    score: 10.7 bits;  conditional E-value: 9.7e-05
                 STT-B-CC--B-S................----BSBSTTEE---S- CS
  PF00053.19   3 CnphgsssssCds................stgqClCkenveGrkCd 32 
                 C++  s +++C+                 +t+ C+C ++++G +C 
    MMETSP1325-20131115|78_1 150 CPEGCSGHGTCEHietlagdvgyslwdtgMTMGCKCDPGYSGADCS 195
                 6666666669999999999999****999****************6 PP

  == domain 4    score: 2.0 bits;  conditional E-value: 0.052
                 STT-B-CC--B-S----BSBSTTEE---S- CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenveGrkCd 32 
                 C+++g    sC  ++g+C+C ++++ ++C 
    MMETSP1325-20131115|78_1 699 CSGRG----SC--VDGVCECFKGFTMDDCG 722
                 55555....66..55**********99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (729 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.06u 0.40s 00:00:01.46 Elapsed: 00:00:01.04
# Mc/sec: 1679.75
//
Query:       MMETSP1325-20131115|89_1  [L=275]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-05   22.3   0.0    0.00012   21.7   0.0    1.3  1  PF00271.26 Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   8.9e-09   0.00012      18      78 .]       2      64 ..       1      64 [. 0.96

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 8.9e-09
                -HHHHHHHHHHHHTTTS..SEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26 18 pqnereeileqfnagks..kvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78
                +++er+  +++f+++ +    l+   +a+  i+l++++  ++++l ++++ ++Q+ +R++R+g
    MMETSP1325-20131115|89_1  2 SPKERQNRINRFQTDPTvrVALLGITAAGVAITLTAASRAVFTELFWTPAALLQAEDRCHRIG 64
                579************999999****************************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.71
# Mc/sec: 928.17
//
Query:       MMETSP1325-20131115|91_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-08   32.6   0.4     0.0077   16.0   0.0    3.2  3  PF13516.1  Leucine Rich repeat
    1.4e-05   24.3   0.1       0.93    9.6   0.1    3.2  2  PF00560.28 Leucine Rich Repeat
    0.00097   18.5   0.0       0.33   10.5   0.0    2.5  2  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.012   15.5   0.0          3    8.3   0.0    3.2  3  PF13504.1  Leucine rich repeat
      0.016   14.2   0.1      0.018   14.0   0.1    1.1  1  PF03102.9  NeuB family
      0.023   14.1   3.5        1.6    8.2   1.0    2.0  2  PF04528.8  Adenovirus early E4 34 kDa protein conserved region
      0.028   14.0   0.0         17    5.1   0.0    2.1  1  PF13855.1  Leucine rich repeat
       0.11   11.8   2.2       0.36   10.0   1.5    1.8  1  PF04080.8  Per1-like
       0.37   10.2   2.4        2.4    7.5   0.2    2.3  2  PF14443.1  DBC1


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00013       0.2       1      23 [.      13      36 ..      13      37 .. 0.89
   2 ?    1.6   0.0      0.25   3.8e+02       9      22 ..      47      61 ..      39      63 .. 0.76
   3 !   16.0   0.0     5e-06    0.0077       1      23 [.      65      88 ..      65      89 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00013
  PF13516.1  1 lknLtsLdLsnN.qigdeGlsaLa 23
               + +Lt++d+s++ +++d  + aLa
   MMETSP1325-20131115|91_1 13 CAKLTTIDFSRCfNLTDAAVIALA 36
               668*********66*****99998 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.25
  PF13516.1  9 LsnNq.igdeGlsaL 22
               Ls++  ++d  + aL
   MMETSP1325-20131115|91_1 47 LSGCYnLTDAAVIAL 61
               788844999887776 PP

  == domain 3    score: 16.0 bits;  conditional E-value: 5e-06
  PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
               + +Lt++dLsn++ ++d  + aLa
   MMETSP1325-20131115|91_1 65 CAKLTTIDLSNCKwLTDAAVIALA 88
               668**********99**9999998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.1   0.00061      0.93       1      15 [.      15      35 ..      15      65 .. 0.78
   2 !    9.5   0.0   0.00064      0.98       1      14 [.      67      81 ..      67      94 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00061
                TESEEEETSS.BCBC.....H CS
  PF00560.28  1 nLeeLdLsgN.nlts.....l 15
                +L+++d+s++ nlt+     l
    MMETSP1325-20131115|91_1 15 KLTTIDFSRCfNLTDaaviaL 35
                699**********97566551 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00064
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                +L+++dLs++  lt+
    MMETSP1325-20131115|91_1 67 KLTTIDLSNCkWLTD 81
                69********88886 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0029       4.4       2      41 ..      15      58 ..      14      63 .. 0.78
   2 !   10.5   0.0   0.00022      0.33      22      40 ..      64      83 ..      40      88 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0029
  PF12799.2  2 nLevLdLsnN.nIkdlppela...nLpnLktLnLsnN.pisdlsa 41
               +L+++d+s++ n++d    +a    ++n  ++ Ls++ +++d  +
   MMETSP1325-20131115|91_1 15 KLTTIDFSRCfNLTDAAV-IAlatHCTNVAMIGLSGCyNLTDAAV 58
               799999999999999665.44335899*********966998655 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00022
  PF12799.2 22 nLpnLktLnLsnNp.isdls 40
                + +L+t++Lsn++ ++d  
   MMETSP1325-20131115|91_1 64 HCAKLTTIDLSNCKwLTDAA 83
               6789*********9888865 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.24   3.6e+02       2      14 ..      15      28 ..      14      33 .. 0.84
   2 ?    1.1   0.0      0.46     7e+02       8      15 ..      47      55 ..      40      59 .. 0.84
   3 ?    8.3   0.0     0.002         3       2      15 ..      67      81 ..      66      85 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.24
  PF13504.1  2 nLkeLdLsgnr.Lt 14
               +L++ d s++  Lt
   MMETSP1325-20131115|91_1 15 KLTTIDFSRCFnLT 28
               6999999**97687 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.46
  PF13504.1  8 Lsgnr.Lts 15
               Lsg++ Lt+
   MMETSP1325-20131115|91_1 47 LSGCYnLTD 55
               899*88985 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.002
  PF13504.1  2 nLkeLdLsgnr.Lts 15
               +L++ dLs+++ Lt+
   MMETSP1325-20131115|91_1 67 KLTTIDLSNCKwLTD 81
               699********8885 PP

>> PF03102.9  NeuB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.2e-05     0.018      43     110 ..      17      83 ..       3      92 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.2e-05
                -HHHHHHHH---HHHHHHHHHHHHH---EEEEEE-SHHHHHHHHHHT-S-EEE----TT-HHHHHHHH CS
  PF03102.9  43 sqlellkklelseeehkelkeyckekgieflstpfdlesvdfleelgvpayKiaSgeitnlpllekva 110
                ++++  + ++l+++   +l+++c +  +  ls +++l+++ ++ +l +++ K+   ++ n + l  +a
   MMETSP1325-20131115|91_1  17 TTIDFSRCFNLTDAAVIALATHCTNVAMIGLSGCYNLTDAAVI-ALTTHCAKLTTIDLSNCKWLTDAA 83 
                7788899999*******************************99.999***************999877 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1    0.0024       3.6      78     113 ..       4      39 ..       1      45 [. 0.83
   2 ?    8.2   1.0     0.001       1.6      71     113 ..      49      91 ..      32      95 .] 0.80

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0024
  PF04528.8  78 nlvvlvCksCaelseisvrcCarrtrellrralkll 113
                  v+ + ++Ca+l+ i  ++C + t + +  +++ +
   MMETSP1325-20131115|91_1   4 AAVIALATHCAKLTTIDFSRCFNLTDAAVIALATHC 39 
                57888999***************9998887776666 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.001
  PF04528.8  71 vlkgllnnlvvlvCksCaelseisvrcCarrtrellrralkll 113
                 ++ l++  v+ + ++Ca+l+ i +++C   t + +  +++ +
   MMETSP1325-20131115|91_1  49 GCYNLTDAAVIALTTHCAKLTTIDLSNCKWLTDAAVIALATHC 91 
                578889999*******************999988777666665 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.011        17      23      59 ..      12      50 ..       8      53 .. 0.61

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.011
  PF13855.1 23 glsnLkvLdLs.gnnlksisp.eafkgLpsLreLnLsgN 59
               ++ +L+++d+s + nl+      +  +++++ ++ Lsg+
   MMETSP1325-20131115|91_1 12 HCAKLTTIDFSrCFNLTDAAViALATHCTNVAMIGLSGC 50
               577788888887777765543133556666666666654 PP

>> PF04080.8  Per1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.5   0.00024      0.36     154     243 ..       5      82 ..       1      92 [. 0.65

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00024
  PF04080.8 154 lvalyvlhvlyLsvvkfdytYnmkanivvgliqlllwlllslkryrklkklelkeskklkllpillvvlvilamslelfDfppilrliDa 243
                 v+++++h+ +L++++f+  +n++   v++l++ ++ ++++  +              ++l+ + +++l++  + l  +D   +++l Da
   MMETSP1325-20131115|91_1   5 AVIALATHCAKLTTIDFSRCFNLTDAAVIALATHCTNVAMIGLS--GC----------YNLTDAAVIALTTHCAKLTTIDLSNCKWLTDA 82 
                56788899999999999999999888888887777665554443..11..........22334445556666666666666666666666 PP

>> PF14443.1  DBC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.059        89      49      62 ..      12      25 ..       2      33 .. 0.76
   2 ?    7.5   0.2    0.0016       2.4      49      64 ..      64      78 ..      46      86 .. 0.80

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.059
  PF14443.1 49 ttkaltgiDLSsct 62
               ++ +lt iD S+c 
   MMETSP1325-20131115|91_1 12 HCAKLTTIDFSRCF 25
               5667999******5 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0016
  PF14443.1 49 ttkaltgiDLSsctkW 64
               ++ +lt iDLS+c+ W
   MMETSP1325-20131115|91_1 64 HCAKLTTIDLSNCK-W 78
               67889********6.5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.64
# Mc/sec: 355.71
//
Query:       MMETSP1325-20131115|93_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.61
# Mc/sec: 326.06
//
Query:       MMETSP1325-20131115|92_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-28   99.3   0.0    2.7e-28   99.1   0.0    1.0  1  PF00450.17 Serine carboxypeptidase
  ------ inclusion threshold ------
      0.036   13.8   0.0      0.045   13.5   0.0    1.2  1  PF12697.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF00450.17  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.1   0.0     4e-32   2.7e-28     300     414 ..       3     119 ..       1     122 [. 0.94

  Alignments for each domain:
  == domain 1    score: 99.1 bits;  conditional E-value: 4e-32
                 SS--S--HHH....HHT---TT.S-TCHHHHHHHHTT.--EEEEE----STT-----HHHHCC--STTHHHHHHS--BBTT-SB---EEEETTEEEEE-------HHHH-HHHHHHHHHH CS
  PF00450.17 300 keweecndev....feqtgddvsksveeilekllesg.lrvliysGdvDlicnflgteawikklnlsgkkefrpwevsledgqvaGyvkeyrnltfltvkgaGHmvpedqPeaalqmikr 414
                 +ew +c+ +       +++ +++  +e++++ l+++  +++l++sGd D +c ++gt++wi  l++++++++++w +   +gqvaGyv++++++tf+tv+gaGH+vp+++P +al++ +r
    MMETSP1325-20131115|92_1   3 IEWLSCSGKTpygtLIYNYSWSDVYMEPYYQYLIDNSdIKILVFSGDDDSVCGTIGTQSWIYDLGYDITQRWTSWDY---EGQVAGYVEKFDGFTFATVHGAGHEVPTYKPAQALKLXQR 119
                 6899999988888767788999999*********9888***************************************...8***********************************9987 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.6e-06     0.045     172     224 ..      36     112 ..      12     116 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.6e-06
                HTT--S-EEEEE-----.....................HHH...HHHHHHHHHHSTTEEEEE---SSSS-...-HHH CS
  PF12697.2 172 larldvPvlviageaDr.....................vvp...peearrlaealpgarvvvlpgagHllfleapde 224
                + + d+++lv +g++D                      +++   + +++ + e++ g+++ ++ gagH ++  +p++
   MMETSP1325-20131115|92_1  36 IDNSDIKILVFSGDDDSvcgtigtqswiydlgyditqrWTSwdyEGQVAGYVEKFDGFTFATVHGAGHEVPTYKPAQ 112
                566799***********777777777666666666666444445666699999***************999999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.62
# Mc/sec: 568.17
//
Query:       MMETSP1325-20131115|94_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.62
# Mc/sec: 212.58
//
Query:       MMETSP1325-20131115|90_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-08   33.7   4.6     0.0013   18.3   0.0    3.8  4  PF01839.18 FG-GAP repeat
    1.6e-06   28.2   4.1      0.011   15.9   0.2    2.8  2  PF13517.1  Family description
     0.0057   15.9   0.1       0.28   10.5   0.0    2.2  2  PF12256.3  Insecticide toxin TcdB middle/N-terminal region
  ------ inclusion threshold ------
      0.097   11.5   0.0       0.17   10.7   0.0    1.3  1  PF12275.3  Protein of unknown function (DUF3616)


Domain annotation for each model (and alignments):
>> PF01839.18  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.3   4.5e+03      13      19 ..      39      45 ..      39      50 .. 0.86
   2 !   18.3   0.0   3.7e-07    0.0013       3      26 ..     100     121 ..      99     132 .. 0.80
   3 !    4.4   0.0    0.0086        29      23      34 .]     192     203 ..     181     203 .. 0.82
   4 !   10.5   0.4    0.0001      0.35       6      20 ..     228     242 ..     226     253 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.3
                --S-EEE CS
  PF01839.18 13 DGrpDla 19
                DG pD a
    MMETSP1325-20131115|90_1 39 DGTPDFA 45
                999*987 PP

  == domain 2    score: 18.3 bits;  conditional E-value: 3.7e-07
                 ECEEEE-TT---S-EEEEETEECT CS
  PF01839.18   3 nsvavgDfnGDGrpDlavGpmggg 26 
                 +s   +D+nGDG ++l+v  ++++
    MMETSP1325-20131115|90_1 100 YSTQFVDINGDGIDELLV--SNHE 121
                 677889************..5554 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.0086
                 EECTCE--EEEE CS
  PF01839.18  23 mggghnGavyvy 34 
                  +g++nGavyv+
    MMETSP1325-20131115|90_1 192 VQGDDNGAVYVL 203
                 368889*****7 PP

  == domain 4    score: 10.5 bits;  conditional E-value: 0.0001
                 EEE-TT---S-EEEE CS
  PF01839.18   6 avgDfnGDGrpDlav 20 
                 + gD++GDG+ +  v
    MMETSP1325-20131115|90_1 228 SMGDVDGDGFVEMFV 242
                 569*******98877 PP

>> PF13517.1  Family description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.2   3.2e-06     0.011       5      61 .]      39     117 ..      37     117 .. 0.56
   2 !   12.7   0.2   3.1e-05      0.11       6      61 .]     186     242 ..     184     242 .. 0.72

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 3.2e-06
  PF13517.1   5 DGdlDlvva..................gdgglrlylnngdGtftdvaet...slgag.gggtgvafgDldgDGdlDllv 61 
                DG +D+ +a                  +  + +l l+++d +  + +      ++++ g  ++  f+D++gDG ++llv
   MMETSP1325-20131115|90_1  39 DGTPDFAFAtrefvdaagvrkmaivtgSFTKSTLALYEADLSSYPPTISeaaIIDTDaGPIYSTQFVDINGDGIDELLV 117
                7777777775555544444444444323444666666655443322221122444444555699*************97 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 3.1e-05
  PF13517.1   6 GdlDlvvagdgglrlylnngdG.tftdvaetslgaggggtg.vafgDldgDGdlDllv 61 
                G++ ++v gd++  +y+ + +G +f+  +  +l  +g+  g + +gD+dgDG  +++v
   MMETSP1325-20131115|90_1 186 GRMHIIVQGDDNGAVYVLSPTGeDFVYSR-AELRLYGDRVGlPSMGDVDGDGFVEMFV 242
                66778888877777777776662476654.46666666666589*********99987 PP

>> PF12256.3  Insecticide toxin TcdB middle/N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   8.1e-05      0.28      24      59 ..      99     136 ..      81     151 .. 0.72
   2 ?    3.3   0.0     0.013        44      28      42 ..     228     242 ..     205     255 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 8.1e-05
  PF12256.3  24 tcqlslaDinGdGladlvlsvphikek...aprhwrldf 59 
                 ++++++DinGdG+  l++s    + +   +++++ +++
   MMETSP1325-20131115|90_1  99 IYSTQFVDINGDGIDELLVSNH-EEDEyfnQSAVFAYEL 136
                4579************999444.3333454445555555 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.013
  PF12256.3  28 slaDinGdGladlvl 42 
                s+ D++GdG++ + +
   MMETSP1325-20131115|90_1 228 SMGDVDGDGFVEMFV 242
                799******998776 PP

>> PF12275.3  Protein of unknown function (DUF3616)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0     5e-05      0.17     217     268 ..      95     148 ..      85     169 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5e-05
  PF12275.3 217 eegklyrkhfldLnGlgirdl..lisgddlliLaGptmdldgeirvfrwkgaan 268
                + g+ y  +f+d nG+gi +l  + +++d ++  +++   + +++   w  aa+
   MMETSP1325-20131115|90_1  95 DAGPIYSTQFVDINGDGIDELlvSNHEEDEYFNQSAVFAYELPAKTADWYAAAP 148
                6799*****************554456788888888888888888888887777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.40s 00:00:00.95 Elapsed: 00:00:00.65
# Mc/sec: 947.48
//
Query:       MMETSP1325-20131115|95_1  [L=504]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-46  158.5   0.0    5.1e-46  156.3   0.0    1.9  1  PF02358.11 Trehalose-phosphatase
     0.0039   16.7   0.0     0.0069   15.8   0.0    1.4  1  PF08282.7  haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF02358.11  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.3   0.0   7.5e-50   5.1e-46      17     233 ..      88     335 ..      82     336 .. 0.93

  Alignments for each domain:
  == domain 1    score: 156.3 bits;  conditional E-value: 7.5e-50
  PF02358.11  17 aavpsdellslLkkLasdpknvvaiiSGrslee.edlfvkvpelglaaeHGafirspsgeswtn................................qaevedlewlkevaeileektertpGsyvEekkfalavHyrnaddefgelqakelaehlesvlkdnpdlevtqgkkvvevrpvgvsKGkaverlleelgsanseddfvlciGDdrtDedmFkvlnktk.esgleievsavsvgskpskakysldd 233
                 ++ ps++++ +L+ L++dpkn v+++SG+++++   ++ +v++lglaae G+f+r+ + + + +                                +    d +w+   ++ +e ++ert G+y+ ++++a+++ +r+ad++f  lq kel+++l++vlk+  ++++ +g + +evrp+gvsKG+ ve++l+el   ++++df +ciGDd +De  +  +++++ +   +   ++ +vg+kps+a ++++d
    MMETSP1325-20131115|95_1  88 RVLPSKKVVGILQSLCKDPKNLVYVLSGKERQDlDAALGSVQGLGLAAEAGFFYRKAKVGGKSSqpvgsdgdkpkagldsmltsgsaaqknegwnmLLPDGDQSWKPISNALMELYMERTHGVYIQQNESAVVWQFRDADPDFAHLQSKELEDQLKTVLKSF-AVDIIRGEDYLEVRPSGVSKGDYVEQILDELM--DNPPDFCICIGDDASDEGCYPRVKRFAeQIDKTSTYFTATVGKKPSAADSYVND 335
                 5679*****************************888999*****************9998888899****************************9855566778*******************************************************999.*******************************8..56************************876666667777778******9998875 PP

>> PF08282.7  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     1e-06    0.0069     148     214 ..     230     297 ..     178     299 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1e-06
                --GGGHHHHHHHHHCCTTTTCEEEEEETTEEEEEE----HHHHHHHHH.HHTT--GGGEEEE----TT CS
  PF08282.7 148 edkedldelekelkeelnklititsssegsleiipkgvsKgtalkkla.kalnisleeviafGDgeND 214
                + + +++ele++lk  l++ +  +  +e++le+ p gvsKg  +++++ + ++ +++ +i +GD+  D
   MMETSP1325-20131115|95_1 230 FAHLQSKELEDQLKTVLKSFAVDIIRGEDYLEVRPSGVSKGDYVEQILdELMDNPPDFCICIGDDASD 297
                4455566666666666666555566799********************8889999*********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.40s 00:00:01.27 Elapsed: 00:00:00.86
# Mc/sec: 1404.38
//
Query:       MMETSP1325-20131115|97_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-18   63.1   0.6      1e-17   63.0   0.4    1.0  1  PF00240.18 Ubiquitin family
      3e-10   39.5   0.2    3.6e-10   39.2   0.1    1.0  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
      0.022   14.3   0.0      0.023   14.3   0.0    1.0  1  PF13019.1  Telomere stability and silencing


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   0.4   2.2e-21     1e-17       1      39 [.       6      44 ..       6      45 .] 0.98

  Alignments for each domain:
  == domain 1    score: 63.0 bits;  conditional E-value: 2.2e-21
                EESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEE CS
  PF00240.18  1 ktlsgktitlevepsdtvselKekieekegipvdqqrLi 39
                ktl+gktitl+vepsdt++++K+ki++kegip+dqqrLi
    MMETSP1325-20131115|97_1  6 KTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLI 44
                89************************************9 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.1   7.8e-14   3.6e-10       1      45 [.       1      44 [.       1      44 [. 0.98

  Alignments for each domain:
  == domain 1    score: 39.2 bits;  conditional E-value: 7.8e-14
               EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE CS
  PF11976.3  1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLi 45
               ++i++k+ +gk+++++V+p++t+++++++ ++k+gip+ +q+rLi
   MMETSP1325-20131115|97_1  1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPP-DQQRLI 44
               89************************************.999997 PP

>> PF13019.1  Telomere stability and silencing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   4.9e-06     0.023       1      46 [.       1      42 [.       1      45 [] 0.92

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.9e-06
  PF13019.1  1 invlvssldglslpktlsltlpstatvsdlvdklserlpasltesl 46
               ++++v++l+g    kt++l ++++ t++++ +k++++ ++++++++
   MMETSP1325-20131115|97_1  1 MQIFVKTLTG----KTITLDVEPSDTIENVKQKIQDKEGIPPDQQR 42
               79********....9***********************99988874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.60
# Mc/sec: 179.73
//
Query:       MMETSP1325-20131115|99_1  [L=361]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-20   71.8   6.0    6.2e-10   38.3   0.2    4.2  4  PF12799.2  Leucine Rich repeats (2 copies)
      2e-16   59.3  10.7    5.2e-09   35.6   0.7    4.6  5  PF13855.1  Leucine rich repeat
    1.9e-06   27.0  12.2       0.33   11.0   0.1    7.0  6  PF00560.28 Leucine Rich Repeat
    4.8e-05   22.8   9.2       0.73    9.9   0.1    6.9  8  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
       0.16   12.1  13.7         36    5.0   0.0    7.2  9  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.2   2.3e-13   6.2e-10       2      42 ..      84     123 ..      83     125 .. 0.95
   2 !   16.5   0.1   1.5e-06    0.0042       2      38 ..     126     161 ..     124     167 .. 0.91
   3 !   17.3   0.0     9e-07    0.0025       3      37 ..     177     210 ..     175     221 .. 0.87
   4 ?   -1.9   0.0      0.93   2.5e+03      26      37 ..     224     235 ..     211     242 .. 0.75

  Alignments for each domain:
  == domain 1    score: 38.3 bits;  conditional E-value: 2.3e-13
  PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaL 42 
                nL+vL+L++N I+++++ +  L++L++L+L++N+is +++L
   MMETSP1325-20131115|99_1  84 NLRVLYLQENMIEKIEG-VDHLKSLTHLYLQHNKISVIENL 123
                9****************.******************88887 PP

  == domain 2    score: 16.5 bits;  conditional E-value: 1.5e-06
  PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisd 38 
                +L +L L +N I  +++ l +L +Lk+L+L++ ++++
   MMETSP1325-20131115|99_1 126 SLVKLFLDDNCIDRVDG-LEGLYKLKELSLASQRLDN 161
                6889*************.*************998875 PP

  == domain 3    score: 17.3 bits;  conditional E-value: 9e-07
  PF12799.2   3 LevLdLsnNnIkdlppelanLpnLktLnLsnNpis 37 
                L +L+Ls+N ++d ++ + +++ L+ L + +N ++
   MMETSP1325-20131115|99_1 177 LAMLNLSGNALTDTSE-ILGFTALEKLFMGRNDLT 210
                669*************.***************987 PP

  == domain 4    score: -1.9 bits;  conditional E-value: 0.93
  PF12799.2  26 LktLnLsnNpis 37 
                L++ + ++++i+
   MMETSP1325-20131115|99_1 224 LEEVDFQGCHIC 235
                777788888775 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.7   1.9e-12   5.2e-09       3      61 .]      62     117 ..      60     117 .. 0.91
   2 !   11.5   0.1   6.1e-05      0.17      25      61 .]     125     159 ..     118     159 .. 0.83
   3 !   13.4   0.1   1.6e-05     0.044      15      61 .]     164     209 ..     160     209 .. 0.84
   4 !   12.9   0.2   2.2e-05     0.061       3      61 .]     177     234 ..     175     234 .. 0.83
   5 ?    0.9   0.0      0.13   3.5e+02       7      53 ..     246     294 ..     243     300 .. 0.72

  Alignments for each domain:
  == domain 1    score: 35.6 bits;  conditional E-value: 1.9e-12
  PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                +++L+L n r+ +i+  ++ + +nL+vL+L++n ++ i+    ++L+sL++L+L++N++
   MMETSP1325-20131115|99_1  62 VTHLQLMNKRIGRIGS-SLLKVDNLRVLYLQENMIEKIE--GVDHLKSLTHLYLQHNKI 117
                689***********95.6666*****************7..589*************98 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 6.1e-05
  PF13855.1  25 snLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 +L +L L +n++ +++   ++gL++L+eL+L + rl
   MMETSP1325-20131115|99_1 125 ASLVKLFLDDNCIDRVD--GLEGLYKLKELSLASQRL 159
                68999**********97..59**********988665 PP

  == domain 3    score: 13.4 bits;  conditional E-value: 1.6e-05
  PF13855.1  15 vipdgaFkgl.snLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                v+ + +F +  + L  L+Lsgn+l+  s+ +  g+++L++L++  N+l
   MMETSP1325-20131115|99_1 164 VLTPACFTSFeHGLAMLNLSGNALTDTSEIL--GFTALEKLFMGRNDL 209
                4667788877799**************9955..999999999999986 PP

  == domain 4    score: 12.9 bits;  conditional E-value: 2.2e-05
  PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksisp.eafkgLpsLreLnLsgNrl 61 
                L  L+Ls+N l++ ++ ++ g + L++L  ++n l+  ++ ++ +++  L+e++++g+++
   MMETSP1325-20131115|99_1 177 LAMLNLSGNALTDTSE-IL-GFTALEKLFMGRNDLTLADAkNLVSQFGLLEEVDFQGCHI 234
                7789999999999985.54.5899999999999999998757999999999999999987 PP

  == domain 5    score: 0.9 bits;  conditional E-value: 0.13
  PF13855.1   7 dLsnNrlkvipdgaFkgl..snLkvLdLsgnnlksispeafkgLpsLre 53 
                 +s++rl++++    +    + L+++  ++ + +   +++f+  ++Lre
   MMETSP1325-20131115|99_1 246 EVSSSRLRKLDGKPVQPFhrKQLQSIRDNNQKVQDYRRRSFEREQHLRE 294
                6778888888555544443377888888888888888899998888886 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0039        11       1      16 [.      84      99 ..      84     104 .. 0.86
   2 !   11.0   0.1   0.00012      0.33       1      16 [.     106     124 ..     106     130 .. 0.77
   3 ?    0.9   0.0      0.26     7e+02       1      15 [.     126     140 ..     126     146 .. 0.78
   4 ?    0.3   0.0      0.39   1.1e+03       1      14 [.     148     161 ..     148     173 .. 0.71
   5 !    5.7   0.1    0.0064        17       4      15 ..     179     194 ..     176     220 .. 0.80
   6 ?    4.1   0.0     0.022        60       2      15 ..     224     247 ..     223     255 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0039
                TESEEEETSSBCBCHH CS
  PF00560.28  1 nLeeLdLsgNnltslp 16
                nL++L+L+ N ++++ 
    MMETSP1325-20131115|99_1 84 NLRVLYLQENMIEKIE 99
                8***********9986 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00012
                 TESEEEETSSBCBC...HH CS
  PF00560.28   1 nLeeLdLsgNnlts...lp 16 
                 +L++L+L++N+++    lp
    MMETSP1325-20131115|99_1 106 SLTHLYLQHNKISVienLP 124
                 79***********934444 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.26
                 TESEEEETSSBCBCH CS
  PF00560.28   1 nLeeLdLsgNnltsl 15 
                 +L +L L++N++  +
    MMETSP1325-20131115|99_1 126 SLVKLFLDDNCIDRV 140
                 6899******99765 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.39
                 TESEEEETSSBCBC CS
  PF00560.28   1 nLeeLdLsgNnlts 14 
                 +L+eL+L + +l +
    MMETSP1325-20131115|99_1 148 KLKELSLASQRLDN 161
                 699****9988875 PP

  == domain 5    score: 5.7 bits;  conditional E-value: 0.0064
                 EEEETSSBCBC....H CS
  PF00560.28   4 eLdLsgNnlts....l 15 
                  L+LsgN lt+    l
    MMETSP1325-20131115|99_1 179 MLNLSGNALTDtseiL 194
                 59*******9745552 PP

  == domain 6    score: 4.1 bits;  conditional E-value: 0.022
                 ESEEEETSSBCB.C.........H CS
  PF00560.28   2 LeeLdLsgNnlt.s.........l 15 
                 Lee d++g++++ +         +
    MMETSP1325-20131115|99_1 224 LEEVDFQGCHICrErsylrsiieV 247
                 89*********9447775555444 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.16   4.3e+02       5      21 ..      63      79 ..      61      81 .. 0.85
   2 ?    3.8   0.0     0.027        73       3      19 ..      84     101 ..      83     105 .. 0.82
   3 !    9.9   0.1   0.00027      0.73       1      15 [.     104     118 ..     104     121 .. 0.92
   4 ?   -0.1   0.2      0.47   1.3e+03       4      21 ..     127     145 ..     125     157 .. 0.69
   5 ?   -2.4   0.0       2.5   6.9e+03       2      10 ..     147     155 ..     146     162 .. 0.77
   6 ?    3.8   0.1     0.025        68       7      16 ..     180     189 ..     177     195 .. 0.90
   7 ?    1.6   0.0      0.14   3.7e+02       3      22 ..     198     217 ..     196     219 .. 0.87
   8 ?   -0.6   0.0      0.69   1.9e+03       4      15 ..     224     235 ..     223     237 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.16
  PF13516.1  5 tsLdLsnNqigdeGlsa 21
               t+L+L n  ig +G s 
   MMETSP1325-20131115|99_1 63 THLQLMNKRIGRIGSSL 79
               89*********999875 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.027
  PF13516.1   3 nLtsLdLsnNqigd.eGl 19 
                nL++L L+ N i + eG+
   MMETSP1325-20131115|99_1  84 NLRVLYLQENMIEKiEGV 101
                9**********9885665 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00027
  PF13516.1   1 lknLtsLdLsnNqig 15 
                lk+Lt+L L++N+i+
   MMETSP1325-20131115|99_1 104 LKSLTHLYLQHNKIS 118
                79***********97 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 0.47
  PF13516.1   4 LtsLdLsnNqigd.eGlsa 21 
                L  L L +N i+  +Gl++
   MMETSP1325-20131115|99_1 127 LVKLFLDDNCIDRvDGLEG 145
                6778888888866555544 PP

  == domain 5    score: -2.4 bits;  conditional E-value: 2.5
  PF13516.1   2 knLtsLdLs 10 
                 +L++L L 
   MMETSP1325-20131115|99_1 147 YKLKELSLA 155
                689999985 PP

  == domain 6    score: 3.8 bits;  conditional E-value: 0.025
  PF13516.1   7 LdLsnNqigd 16 
                L+Ls+N ++d
   MMETSP1325-20131115|99_1 180 LNLSGNALTD 189
                9*******99 PP

  == domain 7    score: 1.6 bits;  conditional E-value: 0.14
  PF13516.1   3 nLtsLdLsnNqigdeGlsaL 22 
                 L+ L +++N+++  ++++L
   MMETSP1325-20131115|99_1 198 ALEKLFMGRNDLTLADAKNL 217
                599999*******9999987 PP

  == domain 8    score: -0.6 bits;  conditional E-value: 0.69
  PF13516.1   4 LtsLdLsnNqig 15 
                L++ d+++++i 
   MMETSP1325-20131115|99_1 224 LEEVDFQGCHIC 235
                8999*****995 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         5   1.4e+04       3      11 ..      62      70 ..      61      75 .. 0.71
   2 ?    2.7   0.0     0.078   2.1e+02       2      14 ..      84      96 ..      83      99 .. 0.83
   3 ?    5.0   0.0     0.013        36       2      16 ..     106     123 ..     105     124 .. 0.73
   4 ?   -1.4   0.0       1.8   4.9e+03       2      14 ..     126     138 ..     126     141 .. 0.81
   5 ?    2.5   0.1     0.092   2.5e+02       2      13 ..     148     159 ..     147     166 .. 0.75
   6 ?    3.1   0.0     0.057   1.6e+02       3      15 ..     177     189 ..     175     194 .. 0.82
   7 ?    0.1   0.0      0.59   1.6e+03       2      14 ..     198     210 ..     197     214 .. 0.88
   8 ?   -2.5   0.0       4.2   1.2e+04       1       7 [.     250     256 ..     250     256 .. 0.84
   9 ?   -0.9   0.0       1.2   3.2e+03       2      10 ..     327     335 ..     326     340 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 5
  PF13504.1  3 LkeLdLsgn 11
                + L L++ 
   MMETSP1325-20131115|99_1 62 VTHLQLMNK 70
               578999875 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.078
  PF13504.1  2 nLkeLdLsgnrLt 14
               nL++L+L  n ++
   MMETSP1325-20131115|99_1 84 NLRVLYLQENMIE 96
               9******998765 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.013
  PF13504.1   2 nLkeLdLsgnr...LtsL 16 
                +L+ L+L +n+   ++ L
   MMETSP1325-20131115|99_1 106 SLTHLYLQHNKisvIENL 123
                8*********93344455 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 1.8
  PF13504.1   2 nLkeLdLsgnrLt 14 
                +L +L L +n ++
   MMETSP1325-20131115|99_1 126 SLVKLFLDDNCID 138
                5889999999875 PP

  == domain 5    score: 2.5 bits;  conditional E-value: 0.092
  PF13504.1   2 nLkeLdLsgnrL 13 
                +LkeL+L++ rL
   MMETSP1325-20131115|99_1 148 KLKELSLASQRL 159
                79*****88555 PP

  == domain 6    score: 3.1 bits;  conditional E-value: 0.057
  PF13504.1   3 LkeLdLsgnrLts 15 
                L  L+Lsgn Lt+
   MMETSP1325-20131115|99_1 177 LAMLNLSGNALTD 189
                6669******985 PP

  == domain 7    score: 0.1 bits;  conditional E-value: 0.59
  PF13504.1   2 nLkeLdLsgnrLt 14 
                 L++L   +n+Lt
   MMETSP1325-20131115|99_1 198 ALEKLFMGRNDLT 210
                7999*9****997 PP

  == domain 8    score: -2.5 bits;  conditional E-value: 4.2
  PF13504.1   1 pnLkeLd 7  
                ++L++Ld
   MMETSP1325-20131115|99_1 250 SRLRKLD 256
                589**98 PP

  == domain 9    score: -0.9 bits;  conditional E-value: 1.2
  PF13504.1   2 nLkeLdLsg 10 
                +L++L+++g
   MMETSP1325-20131115|99_1 327 QLQNLSIHG 335
                699**9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.72
# Mc/sec: 1201.51
//
Query:       MMETSP1325-20131115|101_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0021   17.7   0.5     0.0027   17.4   0.3    1.3  1  PF14073.1 Centrosome localisation domain of Cep57


Domain annotation for each model (and alignments):
>> PF14073.1  Centrosome localisation domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.3     2e-07    0.0027      63     103 ..       9      49 ..       2      70 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 2e-07
  PF14073.1  63 tskLssaearCslLEkqleymrrmvenaekerkavaekqvs 103
                ++ L+++++rC+ LE  l+   ++v ++ +e+ a+ e    
  MMETSP1325-20131115|101_1   9 SVDLAAIKQRCTFLEERLKRADSLVDSTTREKVAIGEMLKR 49 
                5689*****************************99875444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       549  (0.0401551); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.44s 00:00:00.78 Elapsed: 00:00:00.66
# Mc/sec: 257.79
//
Query:       MMETSP1325-20131115|98_1  [L=511]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-37  127.9   0.0    5.9e-37  127.3   0.0    1.3  1  PF00155.16 Aminotransferase class I and II
     0.0039   15.4   0.0      0.007   14.5   0.0    1.3  1  PF01053.15 Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.3   0.0   8.6e-41   5.9e-37       3     363 .]     122     496 ..     120     496 .. 0.87

  Alignments for each domain:
  == domain 1    score: 127.3 bits;  conditional E-value: 8.6e-41
                 --BE--------------HHHHHHHHH..HCCCH---B--------CCHHHHHHHHH---HHHHTT-EEEE--------HHHHHCCHHHHSS--EEEEECS--TCHHHHHHH---EEEEEE-EETTTTEE-HHHHHHHHTT--SS-E...........EEE-SSS-S-------HHHHHHHHHHHHHTT-EEEEEES-------.-HHHHH.HHHHHH-S-EEEEE--CCCCTBGGG----EEEE-HHHHHHHHHCCTTTS-----CCHHHHCTSHHHHHHHHHHHHHHHHHHHHHHHHCC.CC...-TCHHHH-.---EE-----HH...........................HHHCCH.---BE--........---EE-.----TTTHHHHHHHH CS
  PF00155.16   3 vinLgsneylgdsgkptlpevakaeke..galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnk........ktkvvlvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavat.ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLael...glkvlasq.sgmflltdlsae.....................takelskkLlee.vgvyvtpgtsftvpgrlRitv.Aglteeeleelveal 363
                 ++n+ + ++lg+s + +l++ ak +    g +++g++ +yg    + e e+++  f+g        +e+a+ ++  a+a+ ++l++++k  +gd  ++++ +++++  ++ ls++++++y        h+d+e+le+ lk+ ++++k        +++++++e  + +tG + +l +l++l   +kky+ +l++De ++ ++ g+++   t +a+v   + ++ v s++ ++G+ G   G  lgn +v++++r   +++++s++++++v++a+s+al   ++     ++lq++ +++r + a+     l  ++ + s +++l +  ++                     ++++l    ++  +g     g+++ vp+ lR+ v A+++e++l+ +ve +
    MMETSP1325-20131115|98_1 122 KLNFVTFDFLGMSLRDELKDGAKDTLNeyGCGSCGPRGFYGSVMPHIEIENNVKAFMG--------TEGAISYSDSASAVSSTLPAFAK--KGDLLIIDSSVHEPIGIGADLSRSKIMYYD-------HNDMESLEAVLKKVASDDKrlgrnklkQRRFIVTEALFRNTGELVDLRTLVAL---KKKYGYRLILDESFSFGAIGATGRGLTeHAGVPVTDVDIMVVSMAYSLGSIG---GLSLGNVEVADHQRLSGAGYCFSASAPPFVSTAASKALACLESQPSLMKTLQANVTTVRTAVASTcgsMLGLVSDPaSPIIHLNLAGEAaatfpdratqiavleatvqgcKQMDLLITTAKTlKGEKTKDGKEPLVPT-LRLAVrASMDEKMLRTAVETI 496
                 5666666777777776777777777767******************************........**********************9..******************************.......*************999999**********************************...********************66333336999999999***************...******************************************999999999999999999999989996666666659999997777778888887766666664444443333333322222344567777777788.******************987 PP

>> PF01053.15  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0     1e-06     0.007      60     183 ..     170     302 ..     166     315 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1e-06
                 HHHHHHHHCT-SEEE-B----HHHHHHHHCCS----EEEEESS----...........HHHHHHCCHHH---EEEEESTTCHHHHHHHTTTTEEEEEEESSBTTTTB---HHHHHHHHHHCSS-EEEEE-TTTHH CS
  PF01053.15  60 leeriaaLeggeaalavsSGmaAiaaallallkaGdevvatddlYgg...........tqrllekvlkklgvevkfvdtsdleelekaikpntklvylEtptnpllkvvDieaiaklakkkgdvlvvvDntfasp 183
                 +e++++a  g+e a+ +s   +A++++l a++k+Gd +++ +++++               + ++ ++ l+  +k v  +d    ++++ ++ + + +E++   + ++vD++++++l kk g   +++D +f+ +
    MMETSP1325-20131115|98_1 170 IENNVKAFMGTEGAISYSDSASAVSSTLPAFAKKGDLLIIDSSVHEPigigadlsrskIMYYDHNDMESLEAVLKKVASDDKRLGRNKL-KQRRFIVTEALFRNTGELVDLRTLVALKKKYG-YRLILDESFSFG 302
                 7999******************************************9666666544221222233333444444555444443334444.4568999************************7.*******99866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       537  (0.0392774); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.98u 0.37s 00:00:01.35 Elapsed: 00:00:00.86
# Mc/sec: 1423.88
//
Query:       MMETSP1325-20131115|103_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.7   0.1      0.036   13.7   0.0    1.0  1  PF08329.5 Chitinase A, N-terminal domain


Domain annotation for each model (and alignments):
>> PF08329.5  Chitinase A, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.7e-06     0.036      36      70 ..       9      44 ..       2      51 .] 0.75

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.7e-06
  PF08329.5 36 dsvevsvswnvwsgdkgdka.kvlfdgkqvatgaat 70
               d +ev ++w+ ++g+kg k+ kv  dg+     + +
  MMETSP1325-20131115|103_1  9 DGAEVVITWESYKGEKGAKVgKVASDGEIALAMQRQ 44
               7899*************9874788888775544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.61
# Mc/sec: 200.35
//
Query:       MMETSP1325-20131115|104_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.0   1.0       0.31   10.8   0.7    1.7  1  PF04508.7 Viral A-type inclusion protein repeat


Domain annotation for each model (and alignments):
>> PF04508.7  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.7   2.3e-05      0.31       3      21 ..       2      20 ..       2      22 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.3e-05
  PF04508.7  3 ldrlRrkIsdLekqLsdcr 21
               +d l+++I++L  qL+++ 
  MMETSP1325-20131115|104_1  2 IDNLKKEINNLLDQLARDN 20
               799*************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       951  (0.0695582); expected 273.4 (0.02)
Passed bias filter:                      871  (0.0637068); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|102_1  [L=532]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-81  273.0   0.4    2.9e-81  273.0   0.3    1.5  2  PF02181.18 Formin Homology 2 Domain
  ------ inclusion threshold ------
       0.24   11.6   7.1        1.9    8.6   0.9    2.5  2  PF10199.4  Alpha and gamma adaptin binding protein p34
        0.5   10.0   1.8        0.7    9.6   1.2    1.4  1  PF02932.11 Neurotransmitter-gated ion-channel transmembrane region


Domain annotation for each model (and alignments):
>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.0   0.3   6.4e-85   2.9e-81      23     363 ..       5     360 ..       1     369 [. 0.95
   2 ?   -4.3   1.3       1.2   5.4e+03     302     316 ..     393     407 ..     370     429 .. 0.46

  Alignments for each domain:
  == domain 1    score: 273.0 bits;  conditional E-value: 6.4e-85
                 GCSSSHHHHTTCHHHHCTSHHHHHHHHTBSC--HCCH--.........---HCCCCTTCCESSS-HHHHHHHHHHCHHHTS-HHHHHHHHHTTTTCCCTHHHHHHHHHHCGGHHHHHHHHTTCCCGTTB-HHHHHHHCCCTCTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---TTT-CCTTG------GGGGGGCCCSB-STTTSBHHHHHHHHHHT........TSGGGGGHHHHTTTHHHCCTS-HHHHHHHHHHHHHHHHHHHHHHHCHHTTSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---TTCCHHHHHHHHH CS
  PF02181.18  23 qdrgtvWdkleeesfekdldldeleelFsakakkksskk.........ekkkkkkkkkkkikvLdpkrsqnvaIllrklklpaeeivqaileldeevlslellenLlkmlPtkeeleklkeykgdeskLseaeqFllelvkiprleeRleallfksefeeeveelkrkletleaaseeLreseklkklLeliLalGNymNggtrrgqAkGFkLdsLlkLsdvKstdnkttLLhfvvkivee........klpevldlsselsnvekaakvdleelekdvkklekglkklekelekseekeeesdkfvekleefleeaeeklkkleeelkeakelfkelteYfgedpkevspeeffkil 363
                 +  gt+W++l+++    +ldl+ l   F++ ++k++++          +    ++ k+k++++Ld k  qnv+I+l k+++pa +i  aile+de +l+le l++L+  +Pt eel+ +key+gd++ L++ e+F+l++++ipr++ Rl++++fk +f+++ eel+ +l+ +++ + ++r+s+ l++++e++L++GNy+Nggt+rg  +G++LdsL+kL+++Ks dnk+tL+++vv+++e+            +ld++s + +++++ +v+l +  +d k ++k l  +e+++++  + + e+d f +++e+fle a+  +++l ++++++ + f++++  f edpk+v  e ff  l
   MMETSP1325-20131115|102_1   5 DIDGTIWEELDDAH--VELDLATLMSQFAKNKQKTPEELaeeakkaaeKAAAGAAAKPKEVTLLDGKVLQNVGIALAKYRMPAAQIRTAILEMDEVKLDLEKLNSLYSLAPTAEELTTVKEYDGDKALLGKVERFFLQISDIPRYTDRLQCFIFKLKFDTQQEELSASLKLVQSSTRQVRDSKPLRQIMETVLKVGNYLNGGTSRGGSYGYRLDSLTKLANIKSIDNKQTLMNYVVALCEAvdkskagtDAIPMLDVTSTMPDLDEVCRVSLSTWNNDYKGMKKMLTLIETQAAAARKTPFEGDAFPDVMEPFLEHASGAINELGKQYDSTVKFFEDTLVLFAEDPKKVACEDFFGEL 360
                 56688******995..7899999999999999998888899999999878888999**********************************************************************************************************************************************************************************************9997778899***************************************************************************************************865 PP

  == domain 2    score: -4.3 bits;  conditional E-value: 1.2
                 HTTSSTT-THHHHHH CS
  PF02181.18 302 eekeeesdkfvekle 316
                 +++++ ++k  + ++
   MMETSP1325-20131115|102_1 393 AQAKDRNEKKQSTMK 407
                 112222222222222 PP

>> PF10199.4  Alpha and gamma adaptin binding protein p34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.9   0.00041       1.9      95     135 ..      12      53 ..       3      54 .. 0.88
   2 ?    5.8   0.3    0.0032        15      41      77 ..     370     406 ..     244     450 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00041
  PF10199.4  95 egleeadve.dlesllsklqaardnvrnlpdeqRkkfAakva 135
                e+l++a+ve dl+ l+s+  + ++++ +   e++kk A+k+a
  MMETSP1325-20131115|102_1  12 EELDDAHVElDLATLMSQFAKNKQKTPEELAEEAKKAAEKAA 53 
                5778889999****************88888*********98 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0032
  PF10199.4  41 eadlaeleaeeekqddsqpastepdksaaeeesasae 77 
                +a+  ++++ +++++ s++++ e++++   e+++s+ 
  MMETSP1325-20131115|102_1 370 KARNQNEKKRLMAEKASKQKAAEAQAKDRNEKKQSTM 406
                3333344444444433333332222222222222222 PP

>> PF02932.11  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.2   0.00015       0.7     146     206 ..     283     429 ..      23     435 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00015
                 .........................................................................................---------------------------------------------------------- CS
  PF02932.11 146 k......................................................................................sqvkvkvkegsgaetstsekksasskgeseaelspelkkavegvsyiaqhlraededksv 206
                 +                                                                                      + ++ + k++  ae+ +++k+ + ++++++ ++++ +kk + +v  i ++lr+e+ d+ +
   MMETSP1325-20131115|102_1 283 GmkkmltlietqaaaarktpfegdafpdvmepflehasgainelgkqydstvkffedtlvlfaedpkkvacedffgelvlgftrafdKARNQNEKKRLMAEKASKQKAAEAQAKDRNEKKQSTMKKGLSAVDKITKKLRRENPDDVM 429
                 0444444444444444455556666666666666666777777777777777778888888888888888888888888888888888888899999999999999999********************************998554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1578  (0.115418); expected 273.4 (0.02)
Passed bias filter:                      632  (0.0462259); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.11u 0.38s 00:00:01.49 Elapsed: 00:00:00.80
# Mc/sec: 1593.58
//
Query:       MMETSP1325-20131115|108_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.60
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|105_1  [L=425]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.53    9.3   3.5        3.3    6.7   0.2    2.1  2  PF10234.4 Clusterin-associated protein-1


Domain annotation for each model (and alignments):
>> PF10234.4  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.2    0.0024        32     155     197 ..      22      64 ..       5      87 .. 0.85
   2 ?    6.7   0.2   0.00024       3.3     149     198 ..     177     226 ..     162     237 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.0024
  PF10234.4 155 srplelaevekalkeaikelaeelqklkaelenlksdeanLee 197
                 +++e++  e+  ++a++++++ lq+ +a++ +l+ ++++L+ 
  MMETSP1325-20131115|105_1  22 ITQSEVERWERERQQALQDADKALQTGNATMGTLADQQETLDR 64 
                47899******************************99999975 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.00024
  PF10234.4 149 srqkalsrplelaevekalkeaikelaeelqklkaelenlksdeanLeek 198
                 ++++l++  e++ + +++  ai  + ++++ ++++++ ++ +  +L+  
  MMETSP1325-20131115|105_1 177 YLEAQLENIEEMNRMGQVMSGAIAGQIDQVNGMTDQVDDMQDETRALTRM 226
                4677888999*********************************9999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       685  (0.0501024); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.34s 00:00:01.13 Elapsed: 00:00:00.57
# Mc/sec: 1755.95
//
Query:       MMETSP1325-20131115|107_1  [L=493]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-07   31.1   0.0    6.6e-07   29.9   0.0    1.6  1  PF00702.21 haloacid dehalogenase-like hydrolase
    0.00046   19.7   1.5      0.001   18.6   1.0    1.5  1  PF08282.7  haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.021   14.8   0.0    1.5  1  PF12710.2  haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   1.5e-10   6.6e-07     152     204 .]      68     120 ..      58     120 .. 0.83

  Alignments for each domain:
  == domain 1    score: 29.9 bits;  conditional E-value: 1.5e-10
                 HHHHTTCSEEEEHHHTTSHH.HHHHHHHHHTS-GGGEEEEESSCTTHHHHHHTS CS
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00702.21 152 iakqagidslvfaevkPepk.lfvaaieeLqidpgevamvGDgvnDapalaaAg 204
                  a+ + ++s  fa+v P +k ++v++ +  +  ++ + m+GDgvnDapal+aA+
   MMETSP1325-20131115|107_1  68 KATKLILESGGFAQVMPTDKlVIVKTFRNAN-GGSVTGMTGDGVNDAPALKAAN 120
                 56666557779*********77888888877.667*****************97 PP

>> PF08282.7  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   1.0   2.2e-07     0.001     208     243 ..     106     141 ..      96     144 .. 0.93

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 2.2e-07
                E----TTHHHHHH-TEEEE-TTS-HHHHHH-SEE-- CS
  PF08282.7 208 fGDgeNDieMLelaglgvAmgnaspevkaaAdyvtd 243
                 GDg ND + L++a++g+A++ a+  +++aAd + +
  MMETSP1325-20131115|107_1 106 TGDGVNDAPALKAANVGIAVKGATAAAQQAADIILT 141
                6*******************************9875 PP

>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   4.7e-06     0.021     121     191 .]       7     117 ..       2     117 .. 0.65

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 4.7e-06
                HHHH---EE--B--GGG-.----................................................HH----HHHHHHHHHSHHHHHHHH---T.T----S--EE---GGGHHHHH CS
  PF12710.2 121 pvakelgidevnvlatel.edeg................................................ggkvdgritgkldgKaraverlvvlayk.qvggrivvaiGDsanDlpalk 191
                ++ak+ g+++  +la++  e +                                                  g  ++++ +  d K+++v+++     +  +gg  +++ GD+ nD palk
  MMETSP1325-20131115|107_1   7 ETAKRIGLPP-GILANTElE-YLdqetvseeedeseekqqesscfnmcdiesgetseqlqlsskatklileSGG-FAQVMPT-D-KLVIVKTF-----RnANGGSVTGMTGDGVNDAPALK 117
                5555555555.445554422.22356666666666666777777777777777777777777777777776343.4444444.4.********.....66788999*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       676  (0.0494441); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.40s 00:00:01.25 Elapsed: 00:00:00.91
# Mc/sec: 1298.25
//
Query:       MMETSP1325-20131115|100_1  [L=517]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.78
# Mc/sec: 1588.35
//
Query:       MMETSP1325-20131115|109_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-81  271.5   3.3      1e-80  271.2   2.3    1.0  1  PF00503.15 G-protein alpha subunit
    4.8e-10   38.8   0.4    9.8e-10   37.8   0.3    1.4  1  PF00025.16 ADP-ribosylation factor family
  ------ inclusion threshold ------
       0.13   11.5   1.9       0.67    9.2   0.4    1.9  2  PF03731.10 Ku70/Ku80 N-terminal alpha/beta domain


Domain annotation for each model (and alignments):
>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  271.2   2.3   2.2e-84     1e-80     151     388 ..       7     244 ..       4     245 .. 0.97

  Alignments for each domain:
  == domain 1    score: 271.2 bits;  conditional E-value: 2.2e-84
                 HHHHXXXCTCHHXHHHHHHHTXXXXSXXXTTHHHHHTTHHHHHSTTXXXXHHHHHHXXXXXXXXEEEEEXX.XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEGGGTTXBXSSXTTSBHHHHHHHHHHHHHTXGGGSSXEEEEEEEXHHHHHHHTTTSXG.GSGGGTTXX..XX..HHHHHHHHHHHHHHHHHHHHTXXGSXEEEEEXXTTXHHHHHHHHHHHHHHHHHHHHHCXXX CS
  PF00503.15 151 eelaedikelwndpgvqevlerrrkikledsaeyFldnleriaspdYvPtddDilrarlkttGiseikfevesktefrlvDvGGqrserkkWipcfedvdaiiFlvslsefdqvlyedesvnrleeSlklFksicnnkllkntpiiLflNKlDileeKlkkgpk.lskyfpsye..gdrendyesaskylrnkfkeinrensenrkiythftsatdtenvrkvfaavrdiilrenlkksgl 388
                 +++ +++ +lw+dp++q++  rr+++++ +s+  +++++ +i+ pdY+P  +Dil +r++ttG+++ ++++  + +f ++DvGGq ser+kW++ f++ +ai+F+++lse+dq+l+ed+++nr+ ++l+lF +icn k + nt++iLflNK D++e+K++++      +f++y   g +endye   +y+++kfk+ n+++   + +++h+t+atdt nv+ +f++++ iil+++l  sg+
   MMETSP1325-20131115|109_1   7 KDIGNKLSSLWKDPAIQAAWGRRSEFHIIESHAAYFNKMNEICAPDYEPCTEDILASRVRTTGVIQEEYMI-WGSKFVIIDVGGQTSERRKWMHQFDGCQAILFVAALSEYDQNLFEDNTKNRMVDALELFYKICNDKSFTNTHMILFLNKRDLFEQKIQHTAIsSIPFFEDYGaqGWKENDYEAGMEYFKEKFKQQNETKG--KDVFAHVTCATDTSNVQYIFNSCKAIILKDTLSASGF 244
                 6788999****************************************************************.9*****************************************************************************************877889999998888889******************9998..9*******************************98876 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.3   2.2e-13   9.8e-10      41     131 ..      63     163 ..      56     176 .. 0.81

  Alignments for each domain:
  == domain 1    score: 37.8 bits;  conditional E-value: 2.2e-13
                 EE-S--S-EEEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-..........CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT-- CS
  PF00025.16  41 ttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsad..........reRleeakeeLkalleeeelkevallvlaNKqDlpeal 131
                 + v T+g   ee +i + kf + DvGGq++ R+ W + f+  +a++fv   ++          ++R+ +a e + ++ +++   + +++++ NK Dl e+ 
   MMETSP1325-20131115|109_1  63 SRVRTTGVIQEEYMIWGSKFVIIDVGGQTSERRKWMHQFDGCQAILFVAALSEydqnlfedntKNRMVDALELFYKICNDKSFTNTHMILFLNKRDLFEQK 163
                 5667999999*************************************9754321111111122569******************************97654 PP

>> PF03731.10  Ku70/Ku80 N-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.4   0.00015      0.67     114     145 ..     132     163 ..     111     172 .. 0.77
   2 ?    1.0   0.0     0.046   2.1e+02      22      58 ..     187     223 ..     177     230 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00015
                 HHHHHHCHH-SS--SEEEEEEEES-SS--.-C CS
  PF03731.10 114 cldllqketgkkklskkrillftdlddpfedd 145
                 +l+l+ k+   k +++ +++lf + +d+fe++
   MMETSP1325-20131115|109_1 132 ALELFYKICNDKSFTNTHMILFLNKRDLFEQK 163
                 56889999899******************633 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.046
                 HHHHHHHHHHHHHHHHHHTT---EEEEEEE---S-BS CS
  PF03731.10  22 pfeqalkciaellsrkvisnskDligvvlygtdesen 58 
                 + e  +++++e ++++  ++ kD+++ v   td+s+ 
   MMETSP1325-20131115|109_1 187 DYEAGMEYFKEKFKQQNETKGKDVFAHVTCATDTSNV 223
                 5566799999999999999999999999999999964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       574  (0.0419836); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.69
# Mc/sec: 854.35
//
Query:       MMETSP1325-20131115|112_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.4   5.2        2.2    8.4   0.1    3.2  3  PF00560.28 Leucine Rich Repeat
      0.013   14.9   1.1        1.4    8.4   0.1    2.7  3  PF07873.6  YabP family
       0.12   11.8   7.6         16    5.1   5.3    2.6  1  PF12799.2  Leucine Rich repeats (2 copies)
       0.13   12.0   1.9        1.3    8.8   0.2    2.5  2  PF05725.7  FNIP Repeat
       0.46   10.6   7.2         16    5.8   0.2    3.4  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.027        74       2      17 ..       5      21 ..       4      25 .. 0.79
   2 ?    6.1   0.2    0.0048        13       2      21 ..      27      51 ..      26      52 .. 0.80
   3 ?    8.4   0.1   0.00082       2.2       1      22 []      48      70 ..      48      70 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.027
                ESEEEETSSBCB.CHHH CS
  PF00560.28  2 LeeLdLsgNnlt.slpp 17
                 + L+L ++n++ ++  
   MMETSP1325-20131115|112_1  5 VTNLNLASTNIEgNINR 21
                5789******9988865 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0048
                ESEEEETSS.BCB.C...HHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.s...lppslsn 21
                L++L + ++ +lt +   lp s+ +
   MMETSP1325-20131115|112_1 27 LTSLIIYNCtKLTgNikdLPQSITH 51
                899**********887777776655 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.00082
                TESEEEETSS.BCB.CHHHHHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.slppslsnL 22
                ++++L+L  +  l+ ++   ++n+
   MMETSP1325-20131115|112_1 48 SITHLNLEECvELEgNIEV-FKNM 70
                579***********99*99.9986 PP

>> PF07873.6  YabP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0    0.0079        21      46      63 ..       5      22 ..       4      23 .. 0.88
   2 ?   -0.9   0.0      0.41   1.1e+03      53      63 ..      34      45 ..      23      46 .. 0.64
   3 ?    8.4   0.1    0.0005       1.4      46      61 ..      49      65 ..      46      71 .. 0.92

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0079
               --SSSS--EEE-----EE CS
  PF07873.6 46 ikklnleelvieGkIksl 63
               +++lnl +  ieG+I+ l
  MMETSP1325-20131115|112_1  5 VTNLNLASTNIEGNINRL 22
               68999999*******987 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.41
               -.EEE-----EE CS
  PF07873.6 53 e.lvieGkIksl 63
               +  +++G+Ik l
  MMETSP1325-20131115|112_1 34 NcTKLTGNIKDL 45
               445788888865 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0005
               --SSSS--.EEE----- CS
  PF07873.6 46 ikklnlee.lvieGkIk 61
               i++lnlee + +eG+I+
  MMETSP1325-20131115|112_1 49 ITHLNLEEcVELEGNIE 65
               99**************7 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.3     0.006        16       2      39 ..       4      42 ..       3      75 .] 0.62

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.006
  PF12799.2  2 nLevLdLsnNnIk.dlppelanLpnLktLnLsnN.pis.dl 39
               + + L+L+++nI+ +++  l+ +p L++L + n+ +++ ++
  MMETSP1325-20131115|112_1  4 SVTNLNLASTNIEgNINR-LKDMP-LTSLIIYNCtKLTgNI 42
               567888999888766776.66655.5555444443343222 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.054   1.5e+02      11      19 ..       2      10 ..       2      22 .. 0.69
   2 ?    8.8   0.2   0.00049       1.3      29      41 ..      42      54 ..      25      57 .. 0.56

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.054
  PF05725.7 11 PsnleiLil 19
               P+++++L+l
  MMETSP1325-20131115|112_1  2 PKSVTNLNL 10
               677777777 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00049
  PF05725.7 29 igsLPnSlkeLyF 41
               i  LP+S+++L++
  MMETSP1325-20131115|112_1 42 IKDLPQSITHLNL 54
               5556666666655 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.2    0.0057        16       2      16 ..       3      17 ..       3      24 .. 0.86
   2 ?    3.0   0.1     0.045   1.2e+02       4      15 ..      27      39 ..      26      47 .. 0.77
   3 ?    4.7   0.3     0.013        35       2      12 ..      47      57 ..      35      66 .. 0.90

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0057
  PF13516.1  2 knLtsLdLsnNqigd 16
               k+ t+L+L +++i +
  MMETSP1325-20131115|112_1  3 KSVTNLNLASTNIEG 17
               5789********975 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.045
  PF13516.1  4 LtsLdLsnNq.ig 15
               LtsL + n+  ++
  MMETSP1325-20131115|112_1 27 LTSLIIYNCTkLT 39
               89****9985355 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.013
  PF13516.1  2 knLtsLdLsnN 12
               +++t+L+L  +
  MMETSP1325-20131115|112_1 47 QSITHLNLEEC 57
               689*****987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.61
# Mc/sec: 294.63
//
Query:       MMETSP1325-20131115|111_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-07   29.3   0.0    6.2e-07   28.9   0.0    1.1  1  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.014   14.2   0.0       0.02   13.7   0.0    1.2  1  PF14331.1  ImcF-related N-terminal domain


Domain annotation for each model (and alignments):
>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   9.1e-11   6.2e-07     102     184 ..      32     155 ..      19     158 .. 0.82

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 9.1e-11
                 ETTS-S-HHHHHHHHHHHHTT--EEEEEE-TTST.CHHHHHHHHHHHHHH..........................................HHHCTTGCT.....CGEEEEEE-STCCHHHHHHHHHHHH CS
  PF00009.22 102 daveGvepqTeevlrlakklgvkiivviNKiDrv.eaeleeiveelkekl..........................................lekylekge.....eevpvvpgSalkgegidaLleaive 184
                 ++++G+   ++e+lr+a +l+++++vv++K+D+v  +el     +lk  l                                          +       +     e vp++ +S+++g+g++ L e + +
   MMETSP1325-20131115|111_1  32 CSDKGIGKMSREHLRIALALNLPVFVVVTKCDLVgPSELAAALASLKALLavarasssrsasprlspqlapalskeafvvrskegvaqavasW-------QtkanpELVPLILVSSVTGDGLELLNEFLFR 155
                 568999****************************87999999999997778888889999999999999998888888777777776665443.......03444569**************977777655 PP

>> PF14331.1  ImcF-related N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.9e-06      0.02      62      82 ..      45      65 ..      42      81 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.9e-06
  PF14331.1 62 lreqLgirfPVYvvvTklDll 82
               lr  L +++PV+vvvTk+Dl+
  MMETSP1325-20131115|111_1 45 LRIALALNLPVFVVVTKCDLV 65
               777899*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.31s 00:00:00.85 Elapsed: 00:00:00.78
# Mc/sec: 847.94
//
Query:       MMETSP1325-20131115|114_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-16   59.6   2.0    2.9e-16   59.2   1.4    1.1  1  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   1.4   2.1e-20   2.9e-16      23     153 ..      40     173 ..      34     174 .] 0.75

  Alignments for each domain:
  == domain 1    score: 59.2 bits;  conditional E-value: 2.1e-20
                 XXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT.........-S--------HHHHH-XXXXXXXX CS
  PF00520.26  23 fklkftylrdpwnilDflvvlpslvslilrllnkasgllavlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvke.........kagenpnngntnfdtfgeafltlf 153
                 f   + ++ +  n++D++++lp++++l++ +++ + g l+vlrl rv+R++++ ++++g++ + + +++s +al   l+++++    + ++g +lf  +l +++  +          ++ + + + + f++++ +f++++
   MMETSP1325-20131115|114_1  40 F---WGFVLNALNLIDLAAILPFYIDLAVGSTGGGLGFLRVLRLARVFRVFKMGKYNKGMQLVSRVMVQSAPALQLMLFFTIL---GMVLFGSMLFFCELGTWKLTDeypdgvymrRTSDGLDTEPSPFTSIPACFWWVI 173
                 4...6899***********************9987677777777777778888888888777777777777766555444444...44444444444444444433356778**************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.80
# Mc/sec: 521.21
//
Query:       MMETSP1325-20131115|110_1  [L=447]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.0   0.1      0.025   14.2   0.1    1.3  1  PF08630.5 Dfp1/Him1, central region


Domain annotation for each model (and alignments):
>> PF08630.5  Dfp1/Him1, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   1.8e-06     0.025      60     104 ..     254     297 ..     231     309 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.8e-06
  PF08630.5  60 GpsdrdpkakrkdlhyfkgpyvyvyDleqkvrpimvreyqkvaek 104
                 +++rdp ++ +++++++  yv v D ++ +   ++ e+ k++e+
  MMETSP1325-20131115|110_1 254 PTHERDPDVHVDEWVTIRRAYVKVDDKTNDMIGKALSEW-KAQEE 297
                589************************************.33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.80
# Mc/sec: 1338.96
//
Query:       MMETSP1325-20131115|115_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0027   17.7   0.4     0.0094   15.9   0.1    1.9  2  PF13415.1  Galactose oxidase, central domain
  ------ inclusion threshold ------
       0.14   11.5   0.0        3.6    7.0   0.0    2.2  2  PF01344.20 Kelch motif


Domain annotation for each model (and alignments):
>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   1.4e-06    0.0094      17      45 ..      31      68 ..      23      71 .. 0.86
   2 ?   -1.1   0.0      0.31   2.1e+03      14      29 ..      99     114 ..      88     115 .] 0.67

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.4e-06
  PF13415.1 17 rlndvyvldldtntweei.........gslPppRaght 45
               +lnd+  +d+ + +w++          +s+PppR+  t
  MMETSP1325-20131115|115_1 31 ALNDLQAYDTIAKSWTPKlgdsdsvfpPSPPPPRYATT 68
               79**************6668888899999999**9766 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.31
  PF13415.1  14 gqtrlndvyvldldtn 29 
                 + +  d+ +++++++
  MMETSP1325-20131115|115_1  99 DARARDDMSIYNVEKD 114
                3555689999999876 PP

>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0   0.00052       3.6      25      42 ..      30      47 ..      15      48 .. 0.90
   2 ?    2.6   0.0     0.013        88      17      38 ..      92     114 ..      91     115 .] 0.88

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00052
                S-TTEEEEEETTTTEEEE CS
  PF01344.20 25 nalnsVerYDpvtntWek 42
                 aln+   YD+  ++W++
   MMETSP1325-20131115|115_1 30 VALNDLQAYDTIAKSWTP 47
                689*************97 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.013
                 E---BS.TTS-TTEEEEEETTTT CS
  PF01344.20  17 iGGrdg.dtnalnsVerYDpvtn 38 
                 +GG dg d +a ++  +Y+ +++
   MMETSP1325-20131115|115_1  92 MGGVDGaDARARDDMSIYNVEKD 114
                 7******9999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.62
# Mc/sec: 444.49
//
Query:       MMETSP1325-20131115|116_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-17   62.9   0.1    2.4e-17   62.8   0.1    1.0  1  PF00069.20 Protein kinase domain
      1e-12   47.6   0.2    1.1e-12   47.5   0.1    1.0  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.071   12.6   0.2      0.089   12.3   0.1    1.2  1  PF01710.11 Transposase
      0.073   13.0   0.1      0.093   12.7   0.1    1.1  1  PF05066.8  DNA-directed RNA polymerase delta subunit
       0.13   11.5   0.7        1.5    8.1   0.5    2.0  1  PF02170.17 PAZ domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.1   8.7e-21   2.4e-17       4      80 ..       8      83 .]       5      83 .] 0.94

  Alignments for each domain:
  == domain 1    score: 62.8 bits;  conditional E-value: 8.7e-21
                EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE-- CS
  PF00069.20  4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfeekdelylvleyv 80
                 + lG G +G+V+++++++tg ++A+K lk  ++ks+ ++   +E  i+ +l+Hpniv+l+e+f+++++++l++e++
   MMETSP1325-20131115|116_1  8 SQALGTGLSGTVVRVTHRTTGVEYAMKSLKLTKKKSDIKEL-KNETTIMSQLDHPNIVRLIEAFYTETHVHLIMELC 83
                688*********************************99765.67*******************************98 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.1     4e-16   1.1e-12       5      83 ..       9      83 .]       5      83 .] 0.96

  Alignments for each domain:
  == domain 1    score: 47.5 bits;  conditional E-value: 4e-16
                EEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE-- CS
  PF07714.12  5 kklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyv 83
                + lG G  G+Vv+ t++    ++ v+ a+K+lk ++++++ +e+ +e+ im++l+hpniv+l+ ++++e ++ +++e++
   MMETSP1325-20131115|116_1  9 QALGTGLSGTVVRVTHR----TTGVEYAMKSLKLTKKKSDIKELKNETTIMSQLDHPNIVRLIEAFYTETHVHLIMELC 83
                78*************99....999*****************************************************98 PP

>> PF01710.11  Transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.3e-05     0.089      84     107 ..      25      48 ..      15      60 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.3e-05
  PF01710.11  84 tpssilyalkkmkitrkKkeylik 107
                 + + + ya+k +k+t+kK ++   
   MMETSP1325-20131115|116_1  25 RTTGVEYAMKSLKLTKKKSDIKEL 48 
                 467799************984332 PP

>> PF05066.8  DNA-directed RNA polymerase delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   3.4e-05     0.093      16      61 ..      28      73 ..      21      77 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.4e-05
               HHHHHHHHHHHH-S-EEHHHHHHHHHHH----GGG---HHHHHHHH CS
  PF05066.8 16 lievayeilkekkkpmtFkdlvneiqkllgvsdeeikerlaqfYtd 61
                +e a + lk +kk+   k+l ne   ++++++ +i + +  fYt+
  MMETSP1325-20131115|116_1 28 GVEYAMKSLKLTKKKSDIKELKNETTIMSQLDHPNIVRLIEAFYTE 73
               599******************************************8 PP

>> PF02170.17  PAZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.5   0.00054       1.5      28      71 ..      14      55 ..       4      83 .] 0.73

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00054
                HH---EEEETTSCGGEEEEEEEEETTBTTTSEEE-----EEEHH CS
  PF02170.17 28 dlkglivlttyrnnerkyrvagiskdltpestfpdkegeeitva 71
                 l g +v +t+r + ++y  +++   +++++  ++k  +e+t++
   MMETSP1325-20131115|116_1 14 GLSGTVVRVTHRTTGVEYAMKSLKLTKKKSDIKELK--NETTIM 55
                688999999999988999999999999999999999..777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      411  (0.0300614); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.47s 00:00:00.83 Elapsed: 00:00:00.67
# Mc/sec: 296.86
//
Query:       MMETSP1325-20131115|118_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.42s 00:00:00.70 Elapsed: 00:00:00.81
# Mc/sec: 177.51
//
Query:       MMETSP1325-20131115|119_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.63
# Mc/sec: 422.22
//
Query:       MMETSP1325-20131115|117_1  [L=400]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.33    9.9  15.9       0.48    9.4  11.0    1.1  1  PF01690.12 Potato leaf roll virus readthrough protein
       0.72   10.0   5.8        4.6    7.4   0.3    3.3  3  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.81    9.3  32.8      0.035   13.8  17.4    2.1  2  PF08614.6  Autophagy protein 16 (ATG16)
          1    8.6  22.5        1.4    8.1   2.2    2.5  2  PF13870.1  Domain of unknown function (DUF4201)
        4.7    4.6  45.4        6.3    4.2  31.4    1.1  1  PF13514.1  AAA domain


Domain annotation for each model (and alignments):
>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4  11.0   0.00017      0.48     274     455 ..     188     367 ..     159     369 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00017
  PF01690.12 274 eretsktpsaeesesda..ekgllslekedekeevskesesdaeeedeelt.ralaekeaaaeevkdaaeevlqskeepseklvesdkpeltpgaskeaevaatvl.aaesvkedrdplekreksdkapskvlkarkekgvssllsssLeggklkkkaesseeklkkltseqrseyerikkslgkt 455
                 + ++ + +++e ++++a   + +  le +de++e +k++ ++a e +++++  a+ae  aaaee +++a + +++ +++ ++l+ + ++++++ a++e ++ at + ++e  +  +++l   ek +++ +k++ + k+ g  + +s   + ++l++k    e+k+k+  ++++ + +++++ +gk 
   MMETSP1325-20131115|117_1 188 QLKQAQADDEEDEAAKAelADRIAALEADDEEDEAEKAELQEALEAAQQAAdAAAAEAAAAAEEAEAEAAAAAEEMNAKLAELTLANAEDAEEDAAQE-DLIATLKaNNEALAAMVNDLR--EKLKETEDKLDRKMKKIGKLKEGSAEAQAQALMAKV---EAKMKRKEHKKKXQAQKLRHATGKV 367
                 22233333322222222337888999999999999998888776666555505555555566666666666665555566666666666677766666.555555505555566666655..445789999999999999777777777777777775...7888888999999999999999985 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.021        57      38      55 ..     176     193 ..     164     215 .. 0.78
   2 ?   -2.3   0.0       1.8   4.9e+03      18      48 ..     208     235 ..     200     241 .. 0.54
   3 ?    7.4   0.3    0.0017       4.6      15      56 ..     290     328 ..     285     348 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.021
  PF05531.7  38 telnekLdaqsaqLaele 55 
                 ++ +kLd++saqL++ +
  MMETSP1325-20131115|117_1 176 LKIPSKLDELSAQLKQAQ 193
                467789999999998765 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.8
  PF05531.7  18 dkVdalqqqvddvqenlpdvtelnekLdaqs 48 
                d++ al++  dd +++ ++  el+e L+a +
  MMETSP1325-20131115|117_1 208 DRIAALEA--DDEEDEAEK-AELQEALEAAQ 235
                55555544..232333333.46777777654 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0017
  PF05531.7  15 avddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaelet 56 
                 ++   +al + v+d++e+l+++   ++kLd+  +++ +l++
  MMETSP1325-20131115|117_1 290 TLKANNEALAAMVNDLREKLKET---EDKLDRKMKKIGKLKE 328
                55566679999*********994...59***99999998876 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8  17.4   1.3e-05     0.035       3     143 ..     183     313 ..     181     321 .. 0.86
   2 ?    8.7   5.1   0.00045       1.2      81     147 ..     285     350 ..     284     372 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.3e-05
  PF08614.6   3 eeilerLkerdrrekafselfeqyrkLadrtrllkaenealqaekkevqssassstsasgsgsdaaiaeleqklaklreelaelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkeke 143
                +e++++Lk++++ ++++++       Ladr+++l+a+ e+ +aek+e+q+       a +++++aa+a+ ++  a+  e  ae+  + +e++ +l +l+ ++ e+ ee a++e+ +a+l++++++l + ++dl+e+lke e
  MMETSP1325-20131115|117_1 183 DELSAQLKQAQADDEEDEAAKA---ELADRIAALEADDEEDEAEKAELQE-------ALEAAQQAADAAAAEAAAAAEEAEAEAAAAAEEMNAKLAELTLANAEDAEEDAAQEDLIATLKANNEALAAMVNDLREKLKETE 313
                5788999999888877766544...49********************999.......4455556666677777777888889*******************************************************9976 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00045
  PF08614.6  81 eel.aelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkekekale 147
                e+l a l+ ++++la ++++l e+l+e + ++ +k k++ +l++   s e++++ l  ++++k k  e
  MMETSP1325-20131115|117_1 285 EDLiATLKANNEALAAMVNDLREKLKETEDKLDRKMKKIGKLKE--GSAEAQAQALMAKVEAKMKRKE 350
                55437888999********************************9..7788888888888888887655 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.2   0.00053       1.4      81     136 ..     177     232 ..     170     237 .. 0.90
   2 ?    5.8   7.9    0.0026       7.2      68     160 ..     291     355 ..     255     368 .. 0.60

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00053
  PF13870.1  81 hlkeklhfleeeleelkkelkekeeklaklrkelykvklerdklrkenkklrqqgg 136
                 +  kl +l+++l++++ + +e+e+ +a+l +++  ++++ +  ++e+++l++ ++
  MMETSP1325-20131115|117_1 177 KIPSKLDELSAQLKQAQADDEEDEAAKAELADRIAALEADDEEDEAEKAELQEALE 232
                56689**********************************************98776 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0026
  PF13870.1  68 LkkkttktvhalthlkeklhfleeeleelkkelkekeeklaklrkelykvklerdklrkenkklrqqggllrkPaLlkDydktvekveekrks 160
                Lk +      + + l+ekl++ e +l ++ k++ +++e  a+ +++   +k e                             ++++ e+k+k 
  MMETSP1325-20131115|117_1 291 LKANNEALAAMVNDLREKLKETEDKLDRKMKKIGKLKEGSAEAQAQALMAKVE----------------------------AKMKRKEHKKKX 355
                33333333344455555555555555555555555555555555555555555............................444443333332 PP

>> PF13514.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2  31.4    0.0023       6.3     784     959 ..     175     349 ..     163     362 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0023
  PF13514.1 784 llgeeae..eavralkqrlkraredaaalerlkeeleeaeeeleeaaealeeaeaeleaLlqlarvtteeellaavkrsdtrkelekkvaelertleragdglsleelaeeaaaldadeleaeleelkreieeleeelkelaeeiaeakqelarleggstaAeleaeresllaqlrdl 959
                +l+++++  e+  +lkq  ++++ed+aa + l+ +++ +e+  ee +++ +e++++lea  q+a ++  e+++aa+++ +++ ++ +++++  ++l+ a++    e++a+e     ++ l+a+ e+l+  +++l+e+lke ++++ ++ +++ +l++gs  A+++a +++++a+++++
  MMETSP1325-20131115|117_1 175 MLKIPSKldELSAQLKQAQADDEEDEAAKAELADRIAALEADDEEDEAEKAELQEALEAAQQAADAAAAEAAAAAEEAEAEAAAAAEEMNAKLAELTLANAEDAEEDAAQED---LIATLKANNEALAAMVNDLREKLKETEDKLDRKMKKIGKLKEGSAEAQAQALMAKVEAKMKRK 349
                5555555547778888888889999999999*********************************************************999999999999998888888888...89**********************************************************974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2581  (0.18878); expected 273.4 (0.02)
Passed bias filter:                      687  (0.0502487); expected 273.4 (0.02)
Passed Vit filter:                       162  (0.011849); expected 13.7 (0.001)
Passed Fwd filter:                        65  (0.00475424); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 2.06u 0.41s 00:00:02.47 Elapsed: 00:00:01.26
# Mc/sec: 760.75
//
Query:       MMETSP1325-20131115|113_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   12.3   0.0       0.21   11.3   0.0    1.5  1  PF11837.3  Domain of unknown function (DUF3357)


Domain annotation for each model (and alignments):
>> PF11837.3  Domain of unknown function (DUF3357)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.6e-05      0.21      17      66 ..     185     235 ..     169     246 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.6e-05
  PF11837.3  17 sasepsarrrrpl....kvllavlsslllllllvallvvskgqspdgdeaaess 66 
                +++++++++rr l    ++++av++++++++++v+++  + +++++g++a +  
  MMETSP1325-20131115|113_1 185 TRGTAARSSRR-LggkqLIVAAVVVAVVVIVIVVVFV--RGDAPASGQRACSAR 235
                55555556666.3244466677777777777777777..555555555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       859  (0.0628291); expected 273.4 (0.02)
Passed bias filter:                      678  (0.0495904); expected 273.4 (0.02)
Passed Vit filter:                        97  (0.00709479); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.44s 00:00:01.09 Elapsed: 00:00:00.87
# Mc/sec: 710.64
//
Query:       MMETSP1325-20131115|121_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.67
# Mc/sec: 110.88
//
Query:       MMETSP1325-20131115|122_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-09   37.9   0.5    2.4e-09   37.4   0.1    1.5  2  PF10152.4 Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.1   1.8e-13   2.4e-09     110     148 .]      14      52 ..       1      52 [. 0.79
   2 ?   -2.3   0.0      0.32   4.3e+03      88      88 ..      67      67 ..      53      97 .. 0.52

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 1.8e-13
  PF10152.4 110 vrkdpryakYfkmlklgVpaeavknKmqaeGldpelldt 148
                 +k +  +kYfkml + +p +av +Km+aeG+dp+lld+
  MMETSP1325-20131115|122_1  14 AAKPKDVKKYFKMLDMHLPRAAVEQKMIAEGIDPSLLDQ 52 
                34556679*****************************95 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.32
  PF10152.4 88 e 88
                
  MMETSP1325-20131115|122_1 67 R 67
               1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.61
# Mc/sec: 408.56
//
Query:       MMETSP1325-20131115|124_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-09   36.6   0.0      3e-09   36.0   0.0    1.3  1  PF02197.12 Regulatory subunit of type II PKA R-subunit


Domain annotation for each model (and alignments):
>> PF02197.12  Regulatory subunit of type II PKA R-subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   2.2e-13     3e-09       2      32 ..      57      88 ..      56      89 .. 0.95

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 2.2e-13
                --HHHH---HHHHHHH--S-HHHHHHHHH.HH CS
  PF02197.12  2 glqalLedltveVlraqPsDllqFaadYF.ek 32
                +l a+L++++ +V ra+P D+++F+a+YF +k
   MMETSP1325-20131115|124_1 57 DLPAILKEYSKAVIRANPKDVVAFSAEYFrQK 88
                799**************************887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.66
# Mc/sec: 381.24
//
Query:       MMETSP1325-20131115|120_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 791.65
//
Query:       MMETSP1325-20131115|123_1  [L=658]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   7.2e-171  569.6   0.0   1.4e-170  568.6   0.0    1.4  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  568.6   0.0    1e-174  1.4e-170      99     707 ..       1     654 [.       1     655 [. 0.89

  Alignments for each domain:
  == domain 1    score: 568.6 bits;  conditional E-value: 1e-174
  PF03028.10  99 fvesqeldlskiveessastpilfilspGvDplkkveklakklg..ieekkltsvslGqgqgviAekaieeaakeGhWVlLqNiHLaaswlkeLekkleklsegshadFRlfLtaepapk.....lPiglLqnsikltnEpptGlkanllralssfkqevlemckkeae...........fkrllflLcffHAvvqERrkfgplGWnksYeFnegDlrisldvldnyleanapekvpwealryllgeimYGGritddfDrrllrtyleelfteelldeelelapkdesfkvPekkeyeeyleyiee.LpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksreekvkqvlkdileklpklfdkeelkekltae..eekdplvvvlvqEiermnillkeirrslkelskglkGeltiteeleellkallkdkvP.......asWakkaypslkgLaswlsdllkRikqlekwtedllkpktvwlsglfnpqsfltairQsvarknkwpLdklalqvevtkkekeetes.apeegvyveGlfleGarwdlke...............kllaesklkellsalpviwvkaveadk..........keeksvyecPvYktkaRkeltlvltlklktkekkskwilagvalll 707
                 +v ++++d++ +++essastpi+f+l pGvDp++ ve+l+k+ +  +e   + ++s+Gqgq+  Ae+ +e  + +G WV+LqN HL++swl++Le+kle +s ++h+dFR f++aep        +P +lLq+ ik+ nE+p+ lk+n+ ra+  f++e le    e+e           fk  lf+LcffH+v++ R k+g +GW+++Y Fn gDl+i+ dvl++yl +  ++ vpw++lry++geimYGG+itd +Dr + + yl+ +++e+ll+   el p +     Pe+ +y++y  y+ + Lp+e+ P +yGLh+N+ei +l+++t+++++t+l l+  + +++++ g      v++v++dile+lp +  +  l ek++    ++++p+v v+vqE+ rmn ll ei  sl el+kg  G+l +t+++e+l++al++++vP       asW+k a+ps+k La w+ d   R++ le+wte+   p ++w+ glfnp sfltai+Q +ar +++pLd++  ++++tk   +++    p++g++v+Gl++eGarw+  +               ++l++s+++ell ++p+i++kav ++k            ek+ y+cPvY t  R++ t+v+ + lkt++++skw+ agval  
   MMETSP1325-20131115|123_1   1   654
                 677899**************************************7444488*****************************************************************986567777*********************************99986544332222222333339************************************************99.999******************************************.899*99.788889999************9*9999.*****************************977777644444....46899**********88888888877764333999*******************************************************766666669****************************************************************************98776666559*****************753211111222222222257899*****************98855222222222246899**************.***********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.08u 0.40s 00:00:01.48 Elapsed: 00:00:01.01
# Mc/sec: 1561.19
//
Query:       MMETSP1325-20131115|126_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.86
# Mc/sec: 465.34
//
Query:       MMETSP1325-20131115|128_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.63
# Mc/sec: 254.85
//
Query:       MMETSP1325-20131115|129_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.64
# Mc/sec: 460.55
//
Query:       MMETSP1325-20131115|130_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-10   41.1   0.4    3.7e-10   39.9   0.1    1.8  2  PF01399.22 PCI domain
  ------ inclusion threshold ------
      0.029   14.3   0.5      0.048   13.6   0.4    1.3  1  PF06780.6  Erp protein C-terminus
      0.033   13.6   0.0      0.055   12.8   0.0    1.3  1  PF07071.6  Protein of unknown function (DUF1341)
      0.059   12.8   0.1       0.11   12.0   0.0    1.5  1  PF14062.1  Domain of unknown function (DUF4253)
       0.34   10.4   6.0        3.3    7.1   0.1    2.6  3  PF08676.6  MutL C terminal dimerisation domain


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.1   1.3e-13   3.7e-10       2     104 ..      53     146 ..      52     147 .. 0.94
   2 ?   -2.4   0.0       1.9   5.3e+03      37      37 ..     183     183 ..     160     215 .. 0.48

  Alignments for each domain:
  == domain 1    score: 39.9 bits;  conditional E-value: 1.3e-13
                 XXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXX------HHHHHHHHHHHHHS-SEE-TTT----SSS-H.HHHHHHHHHHHH-------B-S----EE-- CS
  PF01399.22   2 sysdllkalrsgnlsgfseelkdleeelladdglsqllesLekkvrerllrqvskiyssislerlaklldlsv.devEkilvklIadgelrakidqpsgivvfk 104
                 +y +ll+ + +g++s++  +  ++           ++ e   +k+r+ ++ +++   +++++e+l+ +l +++  e+E ++++ I++g++++k+dq++g++ +k
   MMETSP1325-20131115|130_1  53 EYLRLLELFAYGTYSQYVAQRDQY----------PDMNEAQTEKLRQLSIVSLAHASKKVPYEELQAELAINNvRELEDLIIDTIYAGLVTGKMDQTTGVLKVK 146
                 6899********************..........5666688***********************************************************9886 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 1.9
                 X CS
  PF01399.22  37 q 37 
                 q
   MMETSP1325-20131115|130_1 183 Q 183
                 3 PP

>> PF06780.6  Erp protein C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.4   1.7e-05     0.048      27     118 ..     117     215 ..     100     233 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.7e-05
  PF06780.6  27 kevedkitgpvyDditddns...nsiyktWgedleee.eeeelkkllkeLedardelRtklkegnkky...tkeneeklkekvkvs.eikeDLeklkskL 118
                +e ed i  ++y  ++ ++      + k     + ++ + ee ++++++L++ rd+  + +k    +    + + +e+ k kv v  ei+e  ++lk+ L
  MMETSP1325-20131115|130_1 117 RELEDLIIDTIYAGLVTGKMdqtTGVLKVK-SAVPRDvKPEEVDQMITKLREWRDNCEAIIKTMAASQahaAAQRDEHAKAKVAVAgEIEEVKKNLKERL 215
                678888999999888766653334455544.555555578899****************99986544333677888899999988436666666677666 PP

>> PF07071.6  Protein of unknown function (DUF1341)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     2e-05     0.055      39      97 ..     108     170 ..     101     186 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2e-05
                SHHHHHHHHHHHHHTTTT-BEE------GGGHHHHHHH....HHHH--SEE-------HHHHH CS
  PF07071.6  39 tveeavedvkkykaeidnaisvGLGaGdpkqsamvaei....skevqpqhvnqvftgvglsra 97 
                ++e a+++v+++++ i ++i  GL +G  +q++ v ++     + v+p+ v+q++t+    r+
  MMETSP1325-20131115|130_1 108 QAELAINNVRELEDLIIDTIYAGLVTGKMDQTTGVLKVksavPRDVKPEEVDQMITKLREWRD 170
                4688***************************9988765211168899********98766555 PP

>> PF14062.1  Domain of unknown function (DUF4253)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.1e-05      0.11      31      80 ..     159     207 ..     135     220 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.1e-05
  PF14062.1  31 aeiiavlrsWeerygaeivalsfdtlelsvkkppkteeealalakEhyaf 80 
                +++i++lr+W+++++a+i  +   + + ++++     +  +a+a E+ ++
  MMETSP1325-20131115|130_1 159 DQMITKLREWRDNCEAIIKTMAASQAHAAAQRDE-HAKAKVAVAGEIEEV 207
                5799********************9999999966.777778888888765 PP

>> PF08676.6  MutL C terminal dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       1.1   3.1e+03      30      75 ..      13      55 ..       9      61 .. 0.58
   2 ?    7.1   0.1    0.0012       3.3      17      47 ..      85     115 ..      82     129 .. 0.81
   3 ?    6.2   0.1    0.0024       6.5     104     141 ..     154     188 ..     129     192 .. 0.74

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.1
               HHHHHHHHHHHHHHHH-S-EEEEEEEEEEE--CCHHHHHHHCHHHH CS
  PF08676.6 30 AherilyeklkeklkeeeksQpLliPlvlelspeeaalleehkeeL 75
               A+ r   e +k++l +   ++ + + + l++++ +a +  eh+e L
  MMETSP1325-20131115|130_1 13 AKSRAAVELIKQALTN---KKIFVFGELLHMENMQALRDTEHAEYL 55
               5555555666665543...555555566666666666666666655 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0012
                EETTEEEEEEHHHHHHHHHHHHHHHHHHH-S CS
  PF08676.6  17 enedglvlvdqhaAherilyeklkeklkeee 47 
                e+ ++l +v++  A +++ ye+l+++l+ ++
  MMETSP1325-20131115|130_1  85 EKLRQLSIVSLAHASKKVPYEELQAELAINN 115
                566789******************9987653 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.0024
                HHHHHHHHHHHHCCHS-HHCCHHHHHHHHCT------- CS
  PF08676.6 104 leelirdlleelaekgeseekleellatlacrsaikag 141
                 +e + +++ +l+e+++   + e++++t+a  +a  a 
  MMETSP1325-20131115|130_1 154 KPEEVDQMITKLREWRD---NCEAIIKTMAASQAHAAA 188
                36678899999999995...899999999998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1023  (0.0748245); expected 273.4 (0.02)
Passed bias filter:                      658  (0.0481276); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.71
# Mc/sec: 857.29
//
Query:       MMETSP1325-20131115|131_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.7   0.0       0.02   14.2   0.0    1.2  1  PF00733.16 Asparagine synthase


Domain annotation for each model (and alignments):
>> PF00733.16  Asparagine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.4e-06      0.02     221     255 .]       1      45 [.       1      45 [. 0.93

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.4e-06
                 HTB-GGGTEETTEE......SHHHHHHH....TS-S-HHHHT--- CS
  PF00733.16 221 lslppelklrlgle......KliLReaa....eellpeeilerpK 255
                 +s++pe+klr+         K++LR a+    + +lp+e+l+r+K
   MMETSP1325-20131115|131_1   1 MSTDPEYKLRKAGAptqfveKWLLRAAFdepeAPWLPDEVLWRQK 45 
                 6899*****988889*************999999*********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.65
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|125_1  [L=501]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-07   31.0   1.1    1.9e-07   31.0   0.7    3.6  3  PF10067.4 Predicted membrane protein (DUF2306)


Domain annotation for each model (and alignments):
>> PF10067.4  Predicted membrane protein (DUF2306)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       0.4   5.4e+03      68      86 ..     130     147 ..      81     150 .. 0.58
   2 !   31.0   0.7   1.4e-11   1.9e-07       2      92 ..     187     285 ..     186     294 .. 0.87
   3 ?   -1.6   3.9      0.19   2.6e+03      17      57 ..     421     458 ..     417     471 .. 0.69

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.4
  PF10067.4  68 iaaHrawmirsyagallaa 86 
                 +aH a+m rs+ag  ++ 
  MMETSP1325-20131115|125_1 130 ARAH-ACMCRSAAGPAAVS 147
                3444.57777777766655 PP

  == domain 2    score: 31.0 bits;  conditional E-value: 1.4e-11
  PF10067.4   2 rrkgtklHRllGriyvllmllaalsglfiaviatgglvg........efslihllslltlitlvlalvairrrniaaHrawmirsyagallaaglftll 92 
                rr + + H+++Gr yv+++ +  ls   +++ +  g+            +++ + sll+l+t++ +++   +r++++Hr w++rs+a+ ++   ++++l
  MMETSP1325-20131115|125_1 187 RRANLSRHKIIGRSYVVFGAICVLSLRPLRDNVGRGWSPsesfsnvaMRWFLDTASLLWLATVFAGVYFGVKRDFDSHRLWITRSVAVMMVPLAQRVIL 285
                7888999***********************9998888777777755344455688*********************************99998888886 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.19
  PF10067.4  17 vllmllaalsglfiaviatgglvgefslihllslltlitlv 57 
                v+ +l+ a+ g ++ ++ +  ++g   l+ +++ll+l+ ++
  MMETSP1325-20131115|125_1 421 VTGVLFMAFVGGWVMFV-NLAMLG--PLLGIFILLWLFIVM 458
                67788888888888888.444444..555666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       599  (0.0438122); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.39s 00:00:01.25 Elapsed: 00:00:00.78
# Mc/sec: 1539.20
//
Query:       MMETSP1325-20131115|134_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 518.48
//
Query:       MMETSP1325-20131115|133_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-58  195.1   0.2    4.1e-58  194.9   0.1    1.1  1  PF01257.14 Respiratory-chain NADH dehydrogenase 24 Kd subunit


Domain annotation for each model (and alignments):
>> PF01257.14  Respiratory-chain NADH dehydrogenase 24 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.9   0.1     3e-62   4.1e-58       1     143 [.      12     157 ..      12     159 .. 0.97

  Alignments for each domain:
  == domain 1    score: 194.9 bits;  conditional E-value: 3e-62
                 HHHHHTTS-..--GGGHHHHHHHHHHH.-----HHHHHHHHHH----HHHH---GGG-SS--SS----EEEEEE-SHHHHT---HHHHHHHHHH-------------EEEEEES----GGG-S-EE-SSS--B---HHHHHHHH-- CS
  PF01257.14   1 ikeiiakyp..rkrsaliplLklaqeq.egylseeaieevaellglppaevyevatFYsmfnlkpvgkyhiqvCtttaCalrgseeilealeeklgikagettadgkftleeveClGaCanAPvvqindevyedltpekveeilea 143
                 +++i+ kyp  +k++ +iplL+laq+q  g+l+ +a++ va+++++pp++vyevatFY+mfn+++ gky iq+C+tt+C+++gse+i++++ ++lgi+ gett+dg ftl eveClGaCanAP+vq+nd++ye ltp++++e+l+ 
   MMETSP1325-20131115|133_1  12 VENILGKYPgnYKQAGIIPLLDLAQRQnGGWLPLAAMDCVAKVVEVPPMRVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKQTIMDELGIHDGETTKDGLFTLLEVECLGACANAPMVQMNDDYYECLTPKTMKELLNL 157
                 5789***********************667****************************************************************************************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.62
# Mc/sec: 881.24
//
Query:       MMETSP1325-20131115|135_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|136_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.6   6.9      0.055   12.8   4.8    1.4  1  PF10500.4 Nuclear RNA-splicing-associated protein
      0.073   13.1   0.0       0.13   12.3   0.0    1.4  1  PF05641.7 Agenet domain


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   4.8   8.1e-06     0.055      57      88 ..     168     199 ..     116     209 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 8.1e-06
  PF10500.4  57 rersssssssssssssssssssskseekrkkr 88 
                 + +s ssssssssssss+ + +++e+  ++r
  MMETSP1325-20131115|136_1 168 SAAASASSSSSSSSSSSSPGTAEAAEAPPQQR 199
                34456677777777777777766666655555 PP

>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.8e-05      0.13       3      40 ..      77     114 ..      75     127 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.8e-05
  PF05641.7   3 kGseVEVsseeeglrgaWfrAkVlkelkeskykveydd 40 
                 G++VEV+ ++      +f+A++l ++ +s++ v ++d
  MMETSP1325-20131115|136_1  77 VGDMVEVRDRDISKLELYFPATILRVNPDSTFDVVHED 114
                6*****************************99998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       668  (0.048859); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.40s 00:00:00.98 Elapsed: 00:00:00.87
# Mc/sec: 647.29
//
Query:       MMETSP1325-20131115|140_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-30  105.0   0.2    3.6e-30  104.9   0.1    1.0  1  PF01105.19 emp24/gp25L/p24 family/GOLD
  ------ inclusion threshold ------
      0.023   14.1   0.0      0.024   14.0   0.0    1.1  1  PF04106.7  Autophagy protein Apg5
       0.07   13.4   0.0       0.12   12.6   0.0    1.5  1  PF13600.1  N-terminal domain of unknown function (DUF4140)


Domain annotation for each model (and alignments):
>> PF01105.19  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.9   0.1   7.8e-34   3.6e-30      38     177 ..       5     140 ..       1     141 [] 0.93

  Alignments for each domain:
  == domain 1    score: 104.9 bits;  conditional E-value: 7.8e-34
  PF01105.19  38 dvdlsvkdpdgngerlvkkkdresegdfsftalesgeykiCfdnsfstksskkvsldievgseakdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvvyL 177
                 +v+++v   ++++++l++k  + + + fsft++  g+++iCf+n  + +  ++v+l++++  ++kdy+++ ++e+l +le   ++ e+kl++i  e++ +r re+ lrd +e + +r+ w+sil++ vl++++++q+vyL
   MMETSP1325-20131115|140_1   5 QVTVTVS--SPEKKQLHQKVLTHDVDTFSFTSHMVGHHEICFKNLANVP--RRVHLEVQTDLAVKDYSEVVRAEHLRPLELLFRRAEDKLSDISAEMEKSRDREAALRDNSEAIANRIQWFSILSISVLLAISAWQMVYL 140
                 7888888..66669999998888779******************98865..89999999998899**************************************************************************9 PP

>> PF04106.7  Autophagy protein Apg5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   5.2e-06     0.024      68     122 ..       4      64 ..       1     116 [. 0.74

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.2e-06
  PF04106.7  68 skkimnLskedskqlwksvknhnldefkrinkkll..pssskkfrniPvriylpsk....l 122
                ++ + + s+ ++kql + v +h++d+f+  ++ +   +   k+++n+P r++l+ +    +
  MMETSP1325-20131115|140_1   4 AQVTVTVSSPEKKQLHQKVLTHDVDTFSFTSHMVGhhEICFKNLANVPRRVHLEVQtdlaV 64 
                567788999******************9998887744445799999*******99865553 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.7e-05      0.12      22     101 ..      38     119 ..      27     122 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.7e-05
  PF13600.1  22 GehelriegLpasldpkSlrvsgegnatvlsvs..vrrrdlq..ekdadaaseelaeleaelraledelarleaekealearia 101
                G he+ +++L+++     l v+    ++v ++s  vr ++l+  e   + a+++l+ + ae+++ +d+ a+l+++ ea ++ri+
  MMETSP1325-20131115|140_1  38 GHHEICFKNLANVPRRVHLEVQTD--LAVKDYSevVRAEHLRplELLFRRAEDKLSDISAEMEKSRDREAALRDNSEAIANRIQ 119
                889999999999888888888877..7888888756666654223445566668888888888888888888888888777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       533  (0.0389848); expected 273.4 (0.02)
Passed bias filter:                      437  (0.0319631); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.68
# Mc/sec: 496.89
//
Query:       MMETSP1325-20131115|141_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.42s 00:00:00.88 Elapsed: 00:00:00.81
# Mc/sec: 585.78
//
Query:       MMETSP1325-20131115|142_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.73
# Mc/sec: 354.53
//
Query:       MMETSP1325-20131115|139_1  [L=463]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-37  125.2  22.2    2.4e-07   30.2   0.0    7.2  7  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   1.8e-11   2.4e-07       6      39 .]     101     134 ..      97     134 .. 0.95
   2 !   13.1   0.0   4.5e-06     0.061      11      38 ..     148     176 ..     142     177 .. 0.93
   3 !   10.2   0.1   3.6e-05      0.49       6      39 .]     189     221 ..     186     221 .. 0.93
   4 !   25.9   0.1     4e-10   5.5e-06       3      39 .]     227     264 ..     225     264 .. 0.94
   5 !   24.2   0.3   1.4e-09   1.9e-05       4      39 .]     271     307 ..     268     307 .. 0.89
   6 !    9.3   0.5     7e-05      0.95      13      39 .]     325     351 ..     320     351 .. 0.93
   7 !   23.6   0.0   2.1e-09   2.8e-05       2      37 ..     357     392 ..     356     392 .. 0.95

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 1.8e-11
                 EEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   6 tlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                  l+gH + V+++ ++ d+++l+s+S Dg++ +Wd
   MMETSP1325-20131115|139_1 101 RLQGHFGKVYAMHWAADSKHLVSASQDGKLIIWD 134
                 699******************************9 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 4.5e-06
                 SSSEEEEEEESS.STEEEEEETTSEEEEE CS
  PF00400.27  11 tspVtcvafspd.gpllasgSrDgtirlW 38 
                 +s+V  +af++  g ++a+g+ D+ + ++
   MMETSP1325-20131115|139_1 148 SSWVMTCAFDQQqGEWVACGGLDNICSIY 176
                 69***********************9998 PP

  == domain 3    score: 10.2 bits;  conditional E-value: 3.6e-05
                 EEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   6 tlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 +l+ H +  +c++f  + + ++++S D  +  Wd
   MMETSP1325-20131115|139_1 189 ELSQHDGYLSCCRFVGN-NEMLTASGDARCIHWD 221
                 6889*************.*********9999998 PP

  == domain 4    score: 25.9 bits;  conditional E-value: 4e-10
                 EEEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27   3 ckatlrgHtspVtcvafspd.gpllasgSrDgtirlWd 39 
                 ++  +++H   + +va+sp+ ++++asgS D + ++Wd
   MMETSP1325-20131115|139_1 227 PTLFFSEHACDCMSVAISPTnPNMFASGSVDASAKVWD 264
                 677899*******************************9 PP

  == domain 5    score: 24.2 bits;  conditional E-value: 1.4e-09
                 EEEE.ESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   4 katl.rgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 ++t+ + H+s +++vaf p+g  + +gS+D+++rl+d
   MMETSP1325-20131115|139_1 271 THTFdKYHSSDINSVAFFPEGYSVGTGSDDSSCRLFD 307
                 5556677****************************98 PP

  == domain 6    score: 9.3 bits;  conditional E-value: 7e-05
                 SEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  13 pVtcvafspdgpllasgSrDgtirlWd 39 
                 ++t+v fs +g+ll+ g +D  ++ Wd
   MMETSP1325-20131115|139_1 325 GITSVGFSKSGRLLFAGYDDYVCHAWD 351
                 79************************8 PP

  == domain 7    score: 23.6 bits;  conditional E-value: 2.1e-09
                 EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEE CS
  PF00400.27   2 eckatlrgHtspVtcvafspdgpllasgSrDgtirl 37 
                 ++k++l+ H++ V+c+ + p+g+ +++gS+D  +++
   MMETSP1325-20131115|139_1 357 QPKYKLQSHENRVSCLGVTPNGHAVCTGSWDTLLKI 392
                 689****************************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.39s 00:00:01.16 Elapsed: 00:00:00.75
# Mc/sec: 1479.35
//
Query:       MMETSP1325-20131115|144_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.046   12.8   4.2      0.016   14.3   1.7    1.4  1  PF00520.26 Ion transport protein
      0.047   11.9   0.7      0.057   11.7   0.5    1.1  1  PF08016.7  Polycystin cation channel
        1.1    8.9   3.3        1.5    8.4   2.3    1.1  1  PF11712.3  Endoplasmic reticulum-based factor for assembly of V-ATPase


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.7   3.6e-06     0.016      78     117 ..       3      42 ..       1      94 [. 0.91

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.6e-06
                 XXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S- CS
  PF00520.26  78 rieglrtllislirsvkallnvlllllfvlfifaiigvql 117
                  +++ ++l++++++++ +l  +++++++++f fa  +v +
   MMETSP1325-20131115|144_1   3 GFQEWGPLVRMILQIIYDLQSFAVVMVVFFFGFAAAFVIM 42 
                 677889****************************999876 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.5   1.3e-05     0.057     321     360 ..       6      45 ..       2      61 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.3e-05
  PF08016.7 321 tlslftktlsralkellgfalvivilllayaqlgvllfgs 360
                ++  + + + + + +l +fa+v+v++++ +a++ v+++  
  MMETSP1325-20131115|144_1   6 EWGPLVRMILQIIYDLQSFAVVMVVFFFGFAAAFVIMNVR 45 
                566677778888899*********************9865 PP

>> PF11712.3  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.3   0.00032       1.5      78     131 ..      15      67 ..      10      70 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00032
  PF11712.3  78 rqlslvlNilvsvvgtffavyywalssfglsepaRvllglvaalivlvaEvvvy 131
                +q+++ l+ +  v+ +ff+++ +a  ++++  +aR++ +l  ++  +v+++ +y
  MMETSP1325-20131115|144_1  15 LQIIYDLQSFAVVMVVFFFGFAAAFVIMNVRSSARIIDTLK-GFGFAVVDTGLY 67 
                588888888999*********9999999********99873.566666777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       565  (0.0413253); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.63
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|137_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00078   18.8   7.5    0.00091   18.6   5.2    1.1  1  PF01391.13 Collagen triple helix repeat (20 copies)


Domain annotation for each model (and alignments):
>> PF01391.13  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   5.2   6.7e-08   0.00091       7      54 ..       2      49 ..       1      56 [. 0.53

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 6.7e-08
  PF01391.13  7 GepGppGppGkrGepGeaGekGekGpaGekGppGaaGkpGapGekGea 54
                G++ ++G+ G++ ++G+aG ++++G+aG++ + GaaG++ a+  +G+a
   MMETSP1325-20131115|137_1  2 GDAAAAGAVGDAAAAGAAGDAAAAGAAGDAAAAGAAGDAAAAAAAGDA 49
                444445555555555555555555555555555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       618  (0.0452019); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 251.82
//
Query:       MMETSP1325-20131115|147_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.63
# Mc/sec: 292.89
//
Query:       MMETSP1325-20131115|146_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.07   12.5   0.3       0.14   11.5   0.0    1.6  2  PF03677.8 Uncharacterised protein family (UPF0137)


Domain annotation for each model (and alignments):
>> PF03677.8  Uncharacterised protein family (UPF0137)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     1e-05      0.14     123     166 ..      90     133 ..      85     168 .. 0.88
   2 ?   -2.5   0.0       0.2   2.7e+03      11      33 ..     180     202 ..     176     204 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1e-05
  PF03677.8 123 LvYYeLFitLPekslklelekiPrkavYlLasRkGslekkvdvi 166
                L Y eL ++LP    + +++ +P++  Y+La  + +++++++v 
  MMETSP1325-20131115|146_1  90 LNYVELLSALPPYVSRFLADTVPQEWHYTLAEPRAHVQQQEEVE 133
                89******************************999999999884 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.2
  PF03677.8  11 fFkkntkdkmeelkkkrlegelf 33 
                f +k +k+ +ee ++kr +ge++
  MMETSP1325-20131115|146_1 180 FRQKSKKEIEEERARKRGQGEFS 202
                56788889999999999888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       902  (0.0659743); expected 273.4 (0.02)
Passed bias filter:                      439  (0.0321094); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.52
# Mc/sec: 990.80
//
Query:       MMETSP1325-20131115|148_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0098   15.8   0.2      0.025   14.5   0.1    1.7  1  PF13485.1  Peptidase MA superfamily


Domain annotation for each model (and alignments):
>> PF13485.1  Peptidase MA superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   1.8e-06     0.025      48     125 ..      30     144 ..      17     147 .. 0.67

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.8e-06
  PF13485.1  48 lplWldEGlAeyve.........................gr..........leaerlaalrdaleag.rlppleelsssfsa.ssengslaYakgallvrylaerygeeklrall 125
                + +W +E l+ ++e                         ++          +++ + ++++d + ++  +   +++    +a ++e++++ Ya+ +++ +yl++  g+ +l+a+l
  MMETSP1325-20131115|148_1  30 TARWHNETLNGFFEhfdrhmndpnetvriaqaleptdplYKelalavdhlqTDQVKWSDVQDLIHSRkGALRDAKMPEYVDAdTPEDDEFTYAQYWHVQSYLEDCLGPTRLKAVL 144
                56777777777777776666555555444444444333311444444445467777777777777653334456665555556999************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.70
# Mc/sec: 684.67
//
Query:       MMETSP1325-20131115|150_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       472  (0.0345231); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.65
# Mc/sec: 549.32
//
Query:       MMETSP1325-20131115|152_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.64
# Mc/sec: 621.56
//
Query:       MMETSP1325-20131115|153_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.62
# Mc/sec: 707.31
//
Query:       MMETSP1325-20131115|154_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.1   0.5      0.045   12.9   0.3    1.1  1  PF01501.15 Glycosyl transferase family 8


Domain annotation for each model (and alignments):
>> PF01501.15  Glycosyl transferase family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   3.3e-06     0.045     232     248 ..      14      30 ..       4      32 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.3e-06
  PF01501.15 232 eeaaviHYigksKPWle 248
                 ++++viH++ + KPW+ 
   MMETSP1325-20131115|154_1  14 KPIKVIHFSSSPKPWEA 30 
                 799************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.66
# Mc/sec: 225.11
//
Query:       MMETSP1325-20131115|149_1  [L=416]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-13   49.5   0.0      5e-13   49.0   0.0    1.2  1  PF00588.14 SpoU rRNA Methylase family
  ------ inclusion threshold ------
      0.028   13.7  11.9      0.056   12.8   8.3    1.4  1  PF10500.4  Nuclear RNA-splicing-associated protein
        0.4    8.4   3.3       0.52    8.1   2.3    1.1  1  PF05716.8  A-kinase anchor protein 110 kDa (AKAP 110)


Domain annotation for each model (and alignments):
>> PF00588.14  SpoU rRNA Methylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   1.1e-16     5e-13      59     142 .]     308     389 ..     279     389 .. 0.88

  Alignments for each domain:
  == domain 1    score: 49.0 bits;  conditional E-value: 1.1e-16
                 EE-S----HHHHHHHH----E-------EGGGS-TTS-EEEEE--------HHHHHH-S--EE-----------HHHHHHHHHH CS
  PF00588.14  59 kvvksleealkdlkeeglkviatslkgkslreielkekvalvfGnEdkGlsnellekadelvkIpmsgeveSLNvavAvailly 142
                 ++  ++ e+l+++ +   +++a++ +g++l++++ +e++++++G+Ed+G+++ +l +a+++v +p   ++eS+Nva+A +i++y
   MMETSP1325-20131115|149_1 308 RHRIDWGEFLQACPRG-AQLVAIEMGGEPLETFTHPERAVYLLGSEDTGVPESVLLAAHHHVALPSV-RYESFNVAMAGSIVMY 389
                 4557899*******86.************************************************95.9**************9 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   8.3   1.2e-05     0.056      60     120 ..     231     292 ..     216     310 .. 0.40

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.2e-05
  PF10500.4  60 sssssssssssssssssssskseekrkkrkkkkkkrekkkekkekkklkkk...gkkkeaeerr 120
                s sss sssssssss s+ss  ++  k  +    +++++++++++ + + k   +++++a++r+
  MMETSP1325-20131115|149_1 231 SPSSSLSSSSSSSSSTSESSLGSNVMKGTN--GAQQQQQQQQRRRPRIDVKlfrKEERAADPRA 292
                323333333333333333333333333222..22222222222222222220001222233433 PP

>> PF05716.8  A-kinase anchor protein 110 kDa (AKAP 110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.3   0.00012      0.52      28     126 ..     204     305 ..     195     309 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00012
  PF05716.8  28 dkapgsgdrasgssqspnlkykstlkikesekegkgeddregskksflykevfesrkagdak..eggrslpa.erklfrgqersddfadsiskGlmvyansv 126
                d   g gd   g   s +++++       s     +  +  ++  s l ++v++  ++ +++  + +r  p+ + klfr +er+ d  +s   G m  a sv
  MMETSP1325-20131115|149_1 204 DGGHGGGDGGHGGGTSNSIHFEMKSSYSPSSSLSSSSSSSSSTSESSLGSNVMKGTNGAQQQqqQQQRRRPRiDVKLFRKEERAADPRASQGAGFMSVASSV 305
                666777777777777766766666666666667777777888888999999999999876651145676776589************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       666  (0.0487127); expected 273.4 (0.02)
Passed bias filter:                      382  (0.0279403); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.39s 00:00:01.21 Elapsed: 00:00:00.64
# Mc/sec: 1557.63
//
Query:       MMETSP1325-20131115|156_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-11   42.7   0.0    7.9e-11   42.1   0.0    1.2  1  PF06337.7 DUSP domain


Domain annotation for each model (and alignments):
>> PF06337.7  DUSP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.0   5.7e-15   7.9e-11       3      93 ..      64     142 ..      62     145 .. 0.87

  Alignments for each domain:
  == domain 1    score: 42.1 bits;  conditional E-value: 5.7e-15
  PF06337.7   3 kwyliskkWleqwkdyvkydekeedsekssaqkpGpIdnssLveteeekakstllengrlkpqlqegkdyelvpeevweaLyewYg.ggpei 93 
                 w +i++ W+ +w  +v+y+++           pG+Idns+L++ +e  a     e+  l ++ +++ +y l+ e+vw++ +e Y+ +gp+i
  MMETSP1325-20131115|156_1  64 RWCIIESGWVSSWLAFVYYNDSSP--------APGSIDNSKLLDGKEGLA----IEGLMLASD-KKQGHYRLIREPVWDLYCELYKgSGPKI 142
                69******************9886........6*************9877....489999965.556679***************6477776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.61
# Mc/sec: 848.55
//
Query:       MMETSP1325-20131115|151_1  [L=420]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-23   82.4   0.0    9.8e-23   80.0   0.0    2.2  2  PF00782.15 Dual specificity phosphatase, catalytic domain
     0.0025   17.0   0.0     0.0036   16.5   0.0    1.2  1  PF00102.22 Protein-tyrosine phosphatase


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.0   0.0   1.4e-26   9.8e-23       2     132 ..      55     214 ..      54     215 .. 0.86
   2 ?   -2.5   0.0      0.45   3.1e+03      57      85 ..     300     328 ..     296     330 .. 0.82

  Alignments for each domain:
  == domain 1    score: 80.0 bits;  conditional E-value: 1.4e-26
                 EE--CTCHC...HHHHHH----EEEETTSSSSEE....................ECCTT---EEEE-----STT--CGGGHHHHHHHHHHH.......CC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-STTHHHHHHHHH CS
  PF00782.15   2 ylgskstas...lalleklgitlvinvtkevpkn....................nadkkseieylripvedetetkiskeleeavefieka.......eqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnagflrqLleyer 132
                 ylgs  +      a+l+++g+t +in+t+  +++                     + ++ + ey+ri ++d++ + + ++l+ a++fi++         ++++ vlVHCq G+sRSa+++iaYl+ t++++ +eAy +vk+rr  + pn+gf  qLl +er
   MMETSP1325-20131115|151_1  55 YLGSFRACDadmGAQLAQIGVTGIINCTTDAEAAchhprrntdctkaavthgttEDGCPFQAEYVRISIHDTEAASLLPYLKGATAFIRRHlepdsssGRDRGAVLVHCQRGVSRSASVVIAYLI-TEGMTRDEAYTLVKRRRRLVDPNIGFFEQLLTFER 214
                 66665443333478999999999999998777668889999999999988887755567788999999999*****************9887777666678999********************9.689****************************9986 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.45
                 GGHHHHHHHHHHHCC----EEEE-----H CS
  PF00782.15  57 keleeavefiekaeqkgkkvlVHCqaGis 85 
                 ++l ++v+ + ++ +k+++vlV   +G s
   MMETSP1325-20131115|151_1 300 QWLGAMVRRVTDLGDKRGSVLVQEIMGWS 328
                 688889999999999******98777766 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   5.3e-07    0.0036     166     202 ..     149     188 ..     115     207 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 5.3e-07
                 S...STTSS-EEEES------HHHHHHHHHHHHHHHHT-- CS
  PF00102.22 166 k...taksgpvvVhCsaGvgRtgtfvaldilleqleaeee 202
                       ++g v+VhC  Gv+R++++v + ++ e ++++e 
   MMETSP1325-20131115|151_1 149 DsssGRDRGAVLVHCQRGVSRSASVVIAYLITEGMTRDEA 188
                 334456789******************9999999998444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.40s 00:00:01.14 Elapsed: 00:00:00.81
# Mc/sec: 1242.56
//
Query:       MMETSP1325-20131115|158_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-57  191.7  11.6    5.2e-20   71.0   0.2    3.3  4  PF13424.1  Tetratricopeptide repeat
    8.7e-41  136.5   8.0    8.3e-15   54.0   0.0    4.9  5  PF13374.1  Tetratricopeptide repeat
    6.6e-18   62.9   5.8    1.7e-06   27.2   0.0    5.0  5  PF13176.1  Tetratricopeptide repeat
    1.2e-16   60.0   7.3    6.3e-09   35.2   0.1    3.2  4  PF13414.1  TPR repeat
    5.4e-14   50.9   5.6    6.1e-06   25.5   0.1    4.4  4  PF00515.23 Tetratricopeptide repeat
    5.1e-13   47.6   6.2    0.00022   20.6   0.0    4.8  5  PF13181.1  Tetratricopeptide repeat
    1.1e-12   46.7   8.2    0.00019   21.0   0.0    5.1  5  PF07719.12 Tetratricopeptide repeat
      1e-09   38.6  10.6    1.8e-05   25.1   0.0    4.1  4  PF13432.1  Tetratricopeptide repeat
    2.5e-09   36.8  14.3       0.04   14.4   0.0    5.1  5  PF13428.1  Tetratricopeptide repeat
    4.6e-08   32.6   0.7       0.41   11.1   0.0    4.8  4  PF07721.9  Tetratricopeptide repeat
    3.8e-07   29.6   6.6        0.2   11.7   0.0    4.7  5  PF13431.1  Tetratricopeptide repeat
      2e-06   27.7   9.3       0.64   10.4   0.0    4.8  5  PF13174.1  Tetratricopeptide repeat
     0.0014   18.5   6.2          1    9.3   0.4    3.3  3  PF12688.2  Tetratrico peptide repeat
     0.0018   18.0   2.5          1    9.1   0.0    3.6  3  PF13371.1  Tetratricopeptide repeat
     0.0052   15.7   0.0        1.1    8.1   0.0    2.0  2  PF00244.15 14-3-3 protein
  ------ inclusion threshold ------
      0.023   14.6   0.1        1.5    8.7   0.0    2.9  3  PF08946.5  Osmosensory transporter coiled coil
      0.028   14.0   0.4        2.7    7.7   0.0    2.7  3  PF12616.3  Protein of unknown function (DUF3775)
      0.068   13.4   0.1        5.9    7.2   0.0    2.5  2  PF14357.1  Domain of unknown function (DUF4404)


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.2   9.6e-18   7.3e-15      22      77 ..       2      58 ..       1      59 [. 0.96
   2 !   71.0   0.2   6.8e-23   5.2e-20       9      76 ..      31      99 ..      31     101 .. 0.96
   3 !   60.0   0.0   1.8e-19   1.4e-16       1      73 [.      65     138 ..      65     143 .. 0.95
   4 !   31.0   0.1     2e-10   1.5e-07       1      74 [.     107     181 ..     107     183 .. 0.96

  Alignments for each domain:
  == domain 1    score: 54.5 bits;  conditional E-value: 9.6e-18
  PF13424.1 22 deAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77
               d+A+ lye+al+  +++lgd h  t+++ nnl+ ly  +g+yd+A++++e+Al+ ++
  MMETSP1325-20131115|158_1  2 DKARPLYEEALAGcRETLGDKHQSTLTSINNLGLLYKTMGEYDKARPLYEEALAGRR 58
               89***********88889***********************************9987 PP

  == domain 2    score: 71.0 bits;  conditional E-value: 6.8e-23
  PF13424.1  9 nnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
               nnl+l+++ +g+yd+A+ lye+al+  +++lg+ hpdt+++ nnla l+  +gd+d+A++++e+Ale  
  MMETSP1325-20131115|158_1 31 NNLGLLYKTMGEYDKARPLYEEALAGrRETLGESHPDTLSSINNLAMLLKTMGDLDAARPMYEQALETK 99
               79************************88899***********************************976 PP

  == domain 3    score: 60.0 bits;  conditional E-value: 1.8e-19
  PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAl 73 
                hpd+ ++ nnla +l+ +gd+d A+ +ye+ale  ++ lg+ hp t+ +++nl++l++ +gd++ A + l++ +
  MMETSP1325-20131115|158_1  65 HPDTLSSINNLAMLLKTMGDLDAARPMYEQALETkREALGNKHPSTLISMFNLGDLLEDMGDLAGAAQILREEV 138
                99********************************99999*****************************999865 PP

  == domain 4    score: 31.0 bits;  conditional E-value: 2e-10
  PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                hp++ ++++nl+++l+ +gd+  A +++++ ++  ++++g++h +t++    l +++ +lgd + A ++  + l+
  MMETSP1325-20131115|158_1 107 HPSTLISMFNLGDLLEDMGDLAGAAQILREEVAGmRAVYGPTHKETLSDAGALYDVLKKLGDDEGAAALAAELLA 181
                8999**************************************************************999888775 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   7.7e-07   0.00058      19      41 ..       2      24 ..       1      25 [. 0.94
   2 !   54.0   0.0   1.1e-17   8.3e-15       1      42 []      26      67 ..      26      67 .. 0.99
   3 !   44.0   0.0   1.5e-14   1.1e-11       1      41 [.      68     108 ..      68     109 .. 0.98
   4 !   19.1   0.0     1e-06   0.00078       1      40 [.     110     149 ..     110     151 .. 0.95
   5 ?    1.3   0.1      0.42   3.2e+02      11      30 ..     162     181 ..     158     183 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 7.7e-07
  PF13374.1 19 eeAlaleeealairrrllGddHP 41
               ++A++l+eeala +r+ lGd H 
  MMETSP1325-20131115|158_1  2 DKARPLYEEALAGCRETLGDKHQ 24
               89*******************95 PP

  == domain 2    score: 54.0 bits;  conditional E-value: 1.1e-17
  PF13374.1  1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42
               t+++ nnL+l++ ++g+y++A++l+eeala rr+ lG+ HPd
  MMETSP1325-20131115|158_1 26 TLTSINNLGLLYKTMGEYDKARPLYEEALAGRRETLGESHPD 67
               89***************************************8 PP

  == domain 3    score: 44.0 bits;  conditional E-value: 1.5e-14
  PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                t+++ nnLA++l ++g++++A++++e+al+++r+ lG  HP
  MMETSP1325-20131115|158_1  68 TLSSINNLAMLLKTMGDLDAARPMYEQALETKREALGNKHP 108
                899*************************************9 PP

  == domain 4    score: 19.1 bits;  conditional E-value: 1e-06
  PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddH 40 
                t+ ++ nL+ +l ++g+++ A ++++e +a  r+++G+ H
  MMETSP1325-20131115|158_1 110 TLISMFNLGDLLEDMGDLAGAAQILREEVAGMRAVYGPTH 149
                677899*********************************9 PP

  == domain 5    score: 1.3 bits;  conditional E-value: 0.42
  PF13374.1  11 alrargryeeAlaleeeala 30 
                +l ++g+ e A al+ e la
  MMETSP1325-20131115|158_1 162 VLKKLGDDEGAAALAAELLA 181
                578899********999987 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.011       8.2      16      33 ..       2      19 ..       1      22 [. 0.80
   2 !   27.2   0.0   2.2e-09   1.7e-06       1      35 [.      29      63 ..      29      64 .. 0.91
   3 !   17.5   0.0   2.8e-06    0.0021       1      32 [.      71     102 ..      71     106 .. 0.88
   4 !   10.1   0.0   0.00069      0.53       2      29 ..     114     139 ..     113     151 .. 0.80
   5 ?    0.6   0.1      0.72   5.5e+02       9      28 ..     163     182 ..     158     185 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.011
  PF13176.1 16 ekAielyeraLaltkdpl 33
               +kA  lye+aLa  ++ l
  MMETSP1325-20131115|158_1  2 DKARPLYEEALAGCRETL 19
               89*********8776655 PP

  == domain 2    score: 27.2 bits;  conditional E-value: 2.2e-09
  PF13176.1  1 allnLarlysrlgdyekAielyeraLaltkdplda 35
               +++nL+ ly  +g+y+kA  lye+aLa +++ l++
  MMETSP1325-20131115|158_1 29 SINNLGLLYKTMGEYDKARPLYEEALAGRRETLGE 63
               689***********************999988765 PP

  == domain 3    score: 17.5 bits;  conditional E-value: 2.8e-06
  PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdp 32 
                +++nLa l   +gd + A  +ye+aL+ +++ 
  MMETSP1325-20131115|158_1  71 SINNLAMLLKTMGDLDAARPMYEQALETKREA 102
                689*********************99887765 PP

  == domain 4    score: 10.1 bits;  conditional E-value: 0.00069
  PF13176.1   2 llnLarlysrlgdyekAielyeraLalt 29 
                 +nL++l +++gd   A++++++  +++
  MMETSP1325-20131115|158_1 114 MFNLGDLLEDMGDLAGAAQILRE--EVA 139
                68********************9..655 PP

  == domain 5    score: 0.6 bits;  conditional E-value: 0.72
  PF13176.1   9 ysrlgdyekAielyeraLal 28 
                  +lgd e A+ l  ++La+
  MMETSP1325-20131115|158_1 163 LKKLGDDEGAAALAAELLAF 182
                5689******9998887776 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.3   1.1e-06   0.00086      20      66 ..       2      55 ..       1      58 [. 0.76
   2 !   35.2   0.1   8.3e-12   6.3e-09       6      66 ..      30      97 ..      26     100 .. 0.85
   3 !   22.1   0.1   9.8e-08   7.5e-05       6      58 ..      72     131 ..      67     139 .. 0.79
   4 !    6.6   0.1    0.0067       5.1       6      65 ..     114     180 ..     109     184 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1.1e-06
  PF13414.1 20 deAieayekAle.....ldpnnae...lyynlAlaylklgkdyeeAledyekAle 66
               d+A  +ye+Al+     l  ++ +     +nl+l+y  +g +y++A+  ye+Al+
  MMETSP1325-20131115|158_1  2 DKARPLYEEALAgcretLGDKHQStltSINNLGLLYKTMG-EYDKARPLYEEALA 55
               6788888888874444444555555668899999999999.59999999999996 PP

  == domain 2    score: 35.2 bits;  conditional E-value: 8.3e-12
  PF13414.1  6 lkelGnalfkegdydeAieayekAle.....ldpnnae...lyynlAlaylklgkdyeeAledyekAle 66
                ++lG  + ++g+yd+A  +ye+Al+     l +++++     +nlA ++  +g d ++A+ +ye+Ale
  MMETSP1325-20131115|158_1 30 INNLGLLYKTMGEYDKARPLYEEALAgrretLGESHPDtlsSINNLAMLLKTMG-DLDAARPMYEQALE 97
               589**********************855555555555544499***********.68***********8 PP

  == domain 3    score: 22.1 bits;  conditional E-value: 9.8e-08
  PF13414.1   6 lkelGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAl 58 
                 ++l++ l ++gd+d A  +ye+Ale          p++ + ++nl+ +++ +g+    A+
  MMETSP1325-20131115|158_1  72 INNLAMLLKTMGDLDAARPMYEQALETKrealgnkhPSTLISMFNLGDLLEDMGD-LAGAA 131
                689**********************9644444433355555*************6.45554 PP

  == domain 4    score: 6.6 bits;  conditional E-value: 0.0067
  PF13414.1   6 lkelGnalfkegdydeAieayekAle.....ldpnnaelyynlAlaylklgk..dyeeAledyekAl 65 
                 ++lG  l  +gd+++A + +++ ++     + p + e ++  +++y  l k  d+e A++ + + l
  MMETSP1325-20131115|158_1 114 MFNLGDLLEDMGDLAGAAQILREEVAgmravYGPTHKETLSDAGALYDVLKKlgDDEGAAALAAELL 180
                5899999999999999999999999876666689999999999998875533324577776665555 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.29   2.2e+02      18      28 ..       2      12 ..       1      13 [. 0.87
   2 !   25.5   0.1     8e-09   6.1e-06       5      28 ..      31      54 ..      29      55 .. 0.96
   3 !   19.3   0.0   7.1e-07   0.00054       5      29 ..      73      97 ..      70     101 .. 0.93
   4 ?    4.1   0.0     0.045        34       5      20 ..     115     130 ..     112     135 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.29
                HHHHHHHHHHH CS
  PF00515.23 18 deAleyyekAL 28
                d+A   ye+AL
   MMETSP1325-20131115|158_1  2 DKARPLYEEAL 12
                899999***99 PP

  == domain 2    score: 25.5 bits;  conditional E-value: 8e-09
                HHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23  5 ynlGnaylklgkydeAleyyekAL 28
                +nlG++y  +g+yd+A   ye+AL
   MMETSP1325-20131115|158_1 31 NNLGLLYKTMGEYDKARPLYEEAL 54
                8**********************9 PP

  == domain 3    score: 19.3 bits;  conditional E-value: 7.1e-07
                HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23  5 ynlGnaylklgkydeAleyyekALe 29
                +nl++++  +g++d A   ye+ALe
   MMETSP1325-20131115|158_1 73 NNLAMLLKTMGDLDAARPMYEQALE 97
                8***********************9 PP

  == domain 4    score: 4.1 bits;  conditional E-value: 0.045
                 HHHHHHHHHTT-HHHH CS
  PF00515.23   5 ynlGnaylklgkydeA 20 
                 +nlG ++  +g++  A
   MMETSP1325-20131115|158_1 115 FNLGDLLEDMGDLAGA 130
                 8***********9877 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       1.1   8.1e+02      18      28 ..       2      12 ..       1      16 [. 0.88
   2 !   20.6   0.0   2.9e-07   0.00022       5      28 ..      31      54 ..      28      58 .. 0.94
   3 !   16.3   0.0   6.9e-06    0.0053       5      32 ..      73     100 ..      70     102 .. 0.92
   4 !    9.1   0.0    0.0014       1.1       5      26 ..     115     136 ..     113     138 .. 0.90
   5 ?   -0.9   0.1       2.2   1.7e+03       7      20 ..     159     172 ..     158     179 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 1.1
               HHHHHHHH--- CS
  PF13181.1 18 dkAkeylekal 28
               dkA   +e+al
  MMETSP1325-20131115|158_1  2 DKARPLYEEAL 12
               899999**998 PP

  == domain 2    score: 20.6 bits;  conditional E-value: 2.9e-07
               TT---HHHHTT-HHHHHHHHH--- CS
  PF13181.1  5 ynlGdiYrqlGdydkAkeylekal 28
               +nlG++Y+ +G+ydkA   +e+al
  MMETSP1325-20131115|158_1 31 NNLGLLYKTMGEYDKARPLYEEAL 54
               69*********************8 PP

  == domain 3    score: 16.3 bits;  conditional E-value: 6.9e-06
                TT---HHHHTT-HHHHHHHHH---HHHH CS
  PF13181.1   5 ynlGdiYrqlGdydkAkeylekalelkp 32 
                +nl+++++ +Gd d+A   +e+ale k+
  MMETSP1325-20131115|158_1  73 NNLAMLLKTMGDLDAARPMYEQALETKR 100
                79**********************9886 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.0014
                TT---HHHHTT-HHHHHHHHH- CS
  PF13181.1   5 ynlGdiYrqlGdydkAkeylek 26 
                +nlGd+++++Gd   A + l++
  MMETSP1325-20131115|158_1 115 FNLGDLLEDMGDLAGAAQILRE 136
                8*************99998887 PP

  == domain 5    score: -0.9 bits;  conditional E-value: 2.2
                ---HHHHTT-HHHH CS
  PF13181.1   7 lGdiYrqlGdydkA 20 
                l d++++lGd + A
  MMETSP1325-20131115|158_1 159 LYDVLKKLGDDEGA 172
                66899999998776 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.099        75      18      29 ..       2      13 ..       1      13 [. 0.90
   2 !   21.0   0.0   2.4e-07   0.00019       5      29 ..      31      55 ..      29      55 .. 0.95
   3 !   13.0   0.0   8.7e-05     0.066       5      29 ..      73      97 ..      71     101 .. 0.94
   4 !    7.9   0.0    0.0037       2.8       4      25 ..     114     135 ..     112     137 .. 0.87
   5 ?    2.1   0.2      0.26     2e+02      10      30 ..     162     182 ..     161     184 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.099
                HHHHHHHHHHHH CS
  PF07719.12 18 eeAleafekAle 29
                ++A+ ++e+Al+
   MMETSP1325-20131115|158_1  2 DKARPLYEEALA 13
                89********96 PP

  == domain 2    score: 21.0 bits;  conditional E-value: 2.4e-07
                HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  5 ynlGlayyklgdyeeAleafekAle 29
                +nlGl+y  +g+y++A+ ++e+Al+
   MMETSP1325-20131115|158_1 31 NNLGLLYKTMGEYDKARPLYEEALA 55
                79*********************96 PP

  == domain 3    score: 13.0 bits;  conditional E-value: 8.7e-05
                HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  5 ynlGlayyklgdyeeAleafekAle 29
                +nl++++  +gd++ A+  +e+Ale
   MMETSP1325-20131115|158_1 73 NNLAMLLKTMGDLDAARPMYEQALE 97
                79**********************8 PP

  == domain 4    score: 7.9 bits;  conditional E-value: 0.0037
                 HHHHHHHHHHTT-HHHHHHHHH CS
  PF07719.12   4 lynlGlayyklgdyeeAleafe 25 
                  +nlG++++ +gd++ A++ ++
   MMETSP1325-20131115|158_1 114 MFNLGDLLEDMGDLAGAAQILR 135
                 69***************98665 PP

  == domain 5    score: 2.1 bits;  conditional E-value: 0.26
                 HHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  10 ayyklgdyeeAleafekAlel 30 
                 ++ klgd e A+++  + l+ 
   MMETSP1325-20131115|158_1 162 VLKKLGDDEGAAALAAELLAF 182
                 6789*********99999875 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.74   5.6e+02      14      25 ..       2      13 ..       1      21 [. 0.79
   2 !   11.9   0.0   0.00034      0.26      36      59 ..      32      55 ..      29      68 .. 0.73
   3 !   25.1   0.0   2.3e-08   1.8e-05       3      58 ..      75     138 ..      73     143 .. 0.91
   4 ?    2.4   1.9      0.31   2.4e+02      37      59 ..     159     181 ..     156     186 .] 0.83

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.74
  PF13432.1 14 deAlaaleaala 25
               d+A++++e+ala
  MMETSP1325-20131115|158_1  2 DKARPLYEEALA 13
               677888877775 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00034
  PF13432.1 36 llaeallrlgrldeAaallraala 59
               +l+ ++  +g++d+A+ l+++ala
  MMETSP1325-20131115|158_1 32 NLGLLYKTMGEYDKARPLYEEALA 55
               567777777777777777777764 PP

  == domain 3    score: 25.1 bits;  conditional E-value: 2.3e-08
  PF13432.1   3 lArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraal 58 
                lA++l   Gd+d+A++ +e+al+          P     +++l+++l ++g+l++Aa+ lr+ +
  MMETSP1325-20131115|158_1  75 LAMLLKTMGDLDAARPMYEQALETKrealgnkhPSTLISMFNLGDLLEDMGDLAGAAQILREEV 138
                89999999***************9999****9999**********************8887754 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.31
  PF13432.1  37 laeallrlgrldeAaallraala 59 
                l ++l +lg+ ++Aaal +++la
  MMETSP1325-20131115|158_1 159 LYDVLKKLGDDEGAAALAAELLA 181
                7899999********99999985 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.31   2.3e+02      18      32 ..       2      16 ..       1      22 [. 0.85
   2 !   14.4   0.0   5.2e-05      0.04       7      30 ..      33      56 ..      29      69 .. 0.87
   3 !   12.8   0.1   0.00017      0.13       6      30 ..      74      98 ..      69     107 .. 0.88
   4 !    8.8   0.1    0.0034       2.6       6      26 ..     116     136 ..     113     140 .. 0.91
   5 ?    4.3   0.8     0.096        73       6      30 ..     158     182 ..     152     185 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.31
  PF13428.1 18 deAiallrralalaP 32
               d+A+ l+++ala + 
  MMETSP1325-20131115|158_1  2 DKARPLYEEALAGCR 16
               89*********9765 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 5.2e-05
  PF13428.1  7 larallalGdpdeAiallrralal 30
               l+ ++  +G++d+A+ l+++ala 
  MMETSP1325-20131115|158_1 33 LGLLYKTMGEYDKARPLYEEALAG 56
               8999*****************984 PP

  == domain 3    score: 12.8 bits;  conditional E-value: 0.00017
  PF13428.1  6 alarallalGdpdeAiallrralal 30
                la +l  +Gd+d+A+ ++++al++
  MMETSP1325-20131115|158_1 74 NLAMLLKTMGDLDAARPMYEQALET 98
               589999****************996 PP

  == domain 4    score: 8.8 bits;  conditional E-value: 0.0034
  PF13428.1   6 alarallalGdpdeAiallrr 26 
                 l+++l+++Gd+++A++ lr+
  MMETSP1325-20131115|158_1 116 NLGDLLEDMGDLAGAAQILRE 136
                5899***************97 PP

  == domain 5    score: 4.3 bits;  conditional E-value: 0.096
  PF13428.1   6 alarallalGdpdeAiallrralal 30 
                al ++l  lGd ++A+al+ ++la 
  MMETSP1325-20131115|158_1 158 ALYDVLKKLGDDEGAAALAAELLAF 182
                566789999**********999985 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.049        37       6      26 .]      32      52 ..      31      52 .. 0.89
   2 !   10.4   0.0    0.0009      0.68       6      26 .]      74      94 ..      73      94 .. 0.94
   3 !   11.1   0.0   0.00054      0.41       5      26 .]     115     136 ..     112     136 .. 0.93
   4 ?   -0.1   0.2       2.2   1.7e+03      15      25 ..     167     177 ..     162     181 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.049
               --HHHHHH-------HHHHHT CS
  PF07721.9  6 aLArallalGdldeAraller 26
               +L+ ++   G++d Ar l e+
  MMETSP1325-20131115|158_1 32 NLGLLYKTMGEYDKARPLYEE 52
               689999999********9986 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.0009
               --HHHHHH-------HHHHHT CS
  PF07721.9  6 aLArallalGdldeAraller 26
               +LA++l   Gdld+Ar + e+
  MMETSP1325-20131115|158_1 74 NLAMLLKTMGDLDAARPMYEQ 94
               79***************9997 PP

  == domain 3    score: 11.1 bits;  conditional E-value: 0.00054
                ---HHHHHH-------HHHHHT CS
  PF07721.9   5 laLArallalGdldeAraller 26 
                ++L+ +l + Gdl+ A+++l++
  MMETSP1325-20131115|158_1 115 FNLGDLLEDMGDLAGAAQILRE 136
                79******************97 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 2.2
                ------HHHHH CS
  PF07721.9  15 GdldeAralle 25 
                Gd + A+al++
  MMETSP1325-20131115|158_1 167 GDDEGAAALAA 177
                55566666654 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00027       0.2      16      33 ..      30      47 ..      28      48 .. 0.92
   2 !    9.7   0.0    0.0012      0.93      10      33 ..      66      89 ..      63      90 .. 0.85
   3 ?   -1.5   0.0       4.9   3.7e+03       1       7 [.      91      97 ..      91      99 .. 0.87
   4 !    8.5   0.0    0.0029       2.2      13      33 ..     111     131 ..     100     132 .. 0.84
   5 ?   -2.5   0.0        10   7.6e+03      22      32 ..     162     172 ..     158     174 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00027
  PF13431.1 16 ynnLAelllnnGdleeAe 33
                nnL++l++  G++++A+
  MMETSP1325-20131115|158_1 30 INNLGLLYKTMGEYDKAR 47
               79***************8 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.0012
  PF13431.1 10 PnnadaynnLAelllnnGdleeAe 33
               P+   + nnLA ll+  Gdl+ A+
  MMETSP1325-20131115|158_1 66 PDTLSSINNLAMLLKTMGDLDAAR 89
               6666789**************997 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 4.9
  PF13431.1  1 lyekale 7 
               +ye+ale
  MMETSP1325-20131115|158_1 91 MYEQALE 97
               79***98 PP

  == domain 4    score: 8.5 bits;  conditional E-value: 0.0029
  PF13431.1  13 adaynnLAelllnnGdleeAe 33 
                  +++nL+ ll + Gdl+ A 
  MMETSP1325-20131115|158_1 111 LISMFNLGDLLEDMGDLAGAA 131
                5789************99885 PP

  == domain 5    score: -2.5 bits;  conditional E-value: 10
  PF13431.1  22 lllnnGdleeA 32 
                +l+++Gd e A
  MMETSP1325-20131115|158_1 162 VLKKLGDDEGA 172
                57899998877 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       6.5     5e+03      17      27 ..       2      12 ..       1      13 [. 0.79
   2 !   10.4   0.0   0.00085      0.64       5      27 ..      32      54 ..      32      55 .. 0.90
   3 !    9.4   0.0    0.0018       1.4       5      28 ..      74      97 ..      74      98 .. 0.91
   4 !    9.5   0.0    0.0017       1.3       2      24 ..     113     135 ..     113     136 .. 0.93
   5 ?    0.5   0.1       1.3   9.5e+02      10      27 ..     163     180 ..     158     181 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 6.5
               HHHHHHHHHHH CS
  PF13174.1 17 deAlealerli 27
               d+A+ ++e+ +
  MMETSP1325-20131115|158_1  2 DKARPLYEEAL 12
               79999999876 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00085
               HHHHHHHHHHHHHHHHHHHHHHH CS
  PF13174.1  5 klalsyyklgdtdeAlealerli 27
               +l+l+y+ +g++d+A+ ++e+ +
  MMETSP1325-20131115|158_1 32 NLGLLYKTMGEYDKARPLYEEAL 54
               6899999999**********976 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.0018
               HHHHHHHHHHHHHHHHHHHHHHHH CS
  PF13174.1  5 klalsyyklgdtdeAlealerlik 28
               +la++++ +gd d+A+ ++e+ ++
  MMETSP1325-20131115|158_1 74 NLAMLLKTMGDLDAARPMYEQALE 97
               6999999999***********986 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.0017
                HHHHHHHHHHHHHHHHHHHHHHH CS
  PF13174.1   2 AlyklalsyyklgdtdeAleale 24 
                ++++l+ +++ +gd + A ++l+
  MMETSP1325-20131115|158_1 113 SMFNLGDLLEDMGDLAGAAQILR 135
                59*********99********98 PP

  == domain 5    score: 0.5 bits;  conditional E-value: 1.3
                HHHHHHHHHHHHHHHHHH CS
  PF13174.1  10 yyklgdtdeAlealerli 27 
                ++klgd + A ++  +l+
  MMETSP1325-20131115|158_1 163 LKKLGDDEGAAALAAELL 180
                567899999999988886 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.075        57      18      33 ..       2      16 ..       1      38 [. 0.73
   2 !    7.8   0.1    0.0038       2.9      11      29 ..      37      55 ..      27      63 .. 0.88
   3 !    9.3   0.4    0.0013         1      12      94 ..      80     172 ..      70     184 .. 0.65

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.075
  PF12688.2 18 akAvplYrrAlaaGLa 33
               +kA plY++Ala G +
  MMETSP1325-20131115|158_1  2 DKARPLYEEALA-GCR 16
               79********97.444 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0038
  PF12688.2 11 rDstGeeakAvplYrrAla 29
               + + Ge +kA plY++Ala
  MMETSP1325-20131115|158_1 37 YKTMGEYDKARPLYEEALA 55
               6789*************97 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.0013
  PF12688.2  12 DstGeeakAvplYrrAlaa.....GLagarrrratiqlaSsLRnlGrveeslalleaelaeap...gdelddalaaflAL..aLssagrerea 94 
                 + G+ ++A p+Y++Al+      G +       +  l+  L  +G ++ + ++l++e+a ++   g   +++l+   AL  +L+++g+++ a
  MMETSP1325-20131115|158_1  80 KTMGDLDAARPMYEQALETkrealGNKHPSTLISMFNLGDLLEDMGDLAGAAQILREEVAGMRavyGPTHKETLSDAGALydVLKKLGDDEGA 172
                678999**********98622212333333444566899999999999999999999998754111334455555555553345566655544 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.025        19      34      57 ..      32      55 ..      22      64 .. 0.86
   2 !    9.1   0.0    0.0013         1      25      60 ..      65     100 ..      59     114 .. 0.89
   3 ?    2.3   0.2      0.18   1.4e+02      35      53 ..     117     135 ..     106     181 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.025
  PF13371.1 34 DrGlllaqlgclaaAaedLeafle 57
                 Gll+  +g++  A+  +e +l+
  MMETSP1325-20131115|158_1 32 NLGLLYKTMGEYDKARPLYEEALA 55
               67**************99998885 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0013
  PF13371.1  25 aPddpyerRDrGlllaqlgclaaAaedLeaflelcp 60 
                +Pd ++ +   ++ll  +g+l aA+  +e++le  +
  MMETSP1325-20131115|158_1  65 HPDTLSSINNLAMLLKTMGDLDAARPMYEQALETKR 100
                79999**************************97665 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.18
  PF13371.1  35 rGlllaqlgclaaAaedLe 53 
                 G ll+ +g+la+Aa+ L+
  MMETSP1325-20131115|158_1 117 LGDLLEDMGDLAGAAQILR 135
                5889999999999998775 PP

>> PF00244.15  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0015       1.1     143     222 ..       2      80 ..       1      82 [. 0.87
   2 !    6.0   0.0    0.0062       4.7     143     214 ..      86     156 ..      80     165 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHHHHHHHHS-TT-TTT---HHHHHHHHHHTSS-HHHHHHHHHHHHHHHHTTGGGSHHHHHHHHHHHHHHHH CS
  PF00244.15 143 ekaleaYkeAleiaeselkpthpirLglaLnfsVFyYEilnspekAcelakqafdeaiaeldslseesykdstlimqLLr 222
                 +ka+  Y+eAl  ++++l   h+  L+ + n   ++Y ++ + +kA  l ++a+    ++l + + ++   ++ +  LL+
   MMETSP1325-20131115|158_1   2 DKARPLYEEALAGCRETLGDKHQSTLTSINNLG-LLYKTMGEYDKARPLYEEALAGRRETLGESHPDTLSSINNLAMLLK 80 
                 688999********************9887776.578*****************99999998888888888877777775 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0062
                 HHHHHHHHHHHHHHHHHS-TT-TTT---HHHHHHHHHHTSS-HHHHHHHHHHHHHHHHTTGGGSHHHHHHHH CS
  PF00244.15 143 ekaleaYkeAleiaeselkpthpirLglaLnfsVFyYEilnspekAcelakqafdeaiaeldslseesykds 214
                 + a+ +Y++Ale+ ++ l + hp  L  + n   ++ E + + + A ++ ++ +  + a     ++e+  d+
   MMETSP1325-20131115|158_1  86 DAARPMYEQALETKREALGNKHPSTLISMFNLGDLL-EDMGDLAGAAQILREEVAGMRAVYGPTHKETLSDA 156
                 678899********************9999998777.77777777777777766666665555555555555 PP

>> PF08946.5  Osmosensory transporter coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       6.1   4.7e+03      33      42 ..      14      23 ..      10      24 .. 0.74
   2 ?    2.3   0.0      0.21   1.6e+02      30      44 ..      53      67 ..      51      68 .. 0.87
   3 ?    8.7   0.0     0.002       1.5      29      44 ..      94     109 ..      93     110 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 6.1
  PF08946.5 33 kKRqkLvdqH 42
                 R++L d+H
  MMETSP1325-20131115|158_1 14 GCRETLGDKH 23
               5689999998 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.21
  PF08946.5 30 eLekKRqkLvdqHPr 44
               +L  +R++L + HP+
  MMETSP1325-20131115|158_1 53 ALAGRRETLGESHPD 67
               67889*********8 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.002
  PF08946.5  29 aeLekKRqkLvdqHPr 44 
                ++Le KR+ L ++HP 
  MMETSP1325-20131115|158_1  94 QALETKREALGNKHPS 109
                58*************5 PP

>> PF12616.3  Protein of unknown function (DUF3775)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.056        43       3      49 ..       9      57 ..       7      81 .. 0.76
   2 ?    7.7   0.0    0.0035       2.7      37      68 ..      92     123 ..      79     129 .. 0.88
   3 ?   -2.2   0.0       4.4   3.3e+03       6      22 ..     159     175 ..     155     177 .. 0.73

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.056
  PF12616.3  3 eeelraliedlnedeqadLvALmwiGRgdfepeeweeavaeareea..r 49
               ee l++  e+l +  q  L+ +  +G   +++ e+++a+  ++e++  r
  MMETSP1325-20131115|158_1  9 EEALAGCRETLGDKHQSTLTSINNLGLLYKTMGEYDKARPLYEEALagR 57
               5678888899999999999999999999999999999999888887441 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0035
  PF12616.3  37 weeavaeareearartadyLlgkpnladyLee 68 
                +e+a+++ re++ ++  + L+++ nl+d+Le+
  MMETSP1325-20131115|158_1  92 YEQALETKREALGNKHPSTLISMFNLGDLLED 123
                899*********8888899***********96 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 4.4
  PF12616.3   6 lraliedlnedeqadLv 22 
                l +++++l +de a  +
  MMETSP1325-20131115|158_1 159 LYDVLKKLGDDEGAAAL 175
                66788899999977655 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0    0.0078       5.9      54      84 ..      53      83 ..      16      83 .. 0.83
   2 ?    3.9   0.0     0.087        66      54      84 ..      95     125 ..      86     125 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0078
  PF14357.1 54 rlneaverFeaeHPklagtlrnildsLanmG 84
                l+   e   ++HP+  + ++n++  L+ mG
  MMETSP1325-20131115|158_1 53 ALAGRRETLGESHPDTLSSINNLAMLLKTMG 83
               55556677889*******************9 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.087
  PF14357.1  54 rlneaverFeaeHPklagtlrnildsLanmG 84 
                 l++  e    +HP+    + n+ d L  mG
  MMETSP1325-20131115|158_1  95 ALETKREALGNKHPSTLISMFNLGDLLEDMG 125
                555666777899******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.75
# Mc/sec: 594.30
//
Query:       MMETSP1325-20131115|161_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-11   42.6   0.0    5.6e-11   42.5   0.0    1.0  1  PF04889.7 Cwf15/Cwc15 cell cycle control protein


Domain annotation for each model (and alignments):
>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   4.1e-15   5.6e-11       1      48 [.       1      50 [.       1      52 [. 0.89

  Alignments for each domain:
  == domain 1    score: 42.5 bits;  conditional E-value: 4.1e-15
  PF04889.7  1 MttahrPtfdparGkeeqggarlv..aqskkyssrdLpahtkLKtRkegq 48
               MttahrPt+ + +G+ ++ g+  +  + s ++s +d+p+htkLK+R+ +q
  MMETSP1325-20131115|161_1  1 MTTAHRPTWVAGKGEASDYGNWSLggKVSGQFSVKDMPGHTKLKMRQGAQ 50
               ******************9987762246889***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 222.82
//
Query:       MMETSP1325-20131115|155_1  [L=584]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-34  118.8   0.0    2.7e-34  118.4   0.0    1.1  1  PF07059.7  Protein of unknown function (DUF1336)
    0.00036   20.5   0.0    0.00094   19.2   0.0    1.7  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF07059.7  Protein of unknown function (DUF1336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.4   0.0     4e-38   2.7e-34       5     226 ..     342     573 ..     338     574 .. 0.85

  Alignments for each domain:
  == domain 1    score: 118.4 bits;  conditional E-value: 4e-38
  PF07059.7   5 dpstfkvRgktYlkdkkKvpaeapllkligvdlfksskkldeiakqlelevqkaakk..kvpfvlvvnlqvPdyaaavffekdgegyslvlyfkleepvek....easpafkellerflkgdevedaFrrerlKiiakivk.gswivkklv..ynekpvlvgkrlqtkyvrgen..ylEidvdihs.ssvarkil.elvlgylkklvlDlalliegqteeELPErvLgavrlnki 226
                d  ++ +R   Y++ kkK p+e+pl++li++d+fk+++++d i ++++ + +    k  +vp+++vvn q P  +  vf e dg+g s+v+yf+ +++  +      ++a  +l++ +     ++ +Fr +r+K ++ i k +   +  +   yn kpvl+ k  + + +rg+n  y+E+dv+ih+ s+  r+ l ++++ + k++++ ++++iegq+  ELPE +Lg   l+ +
  MMETSP1325-20131115|155_1 342 DHAMYPLRTVGYKQHKKKAPGEEPLYELIALDVFKTPSRVDGIYQYVNFPTDVIDTKhpEVPSLFVVNCQFPREKQNVFAEGDGPGASVVFYFAIKQSTVDdlhsGNPSAKVKLFSEWCRIAPDDPTFR-ARFKAMGFIDKiERFGLPYMCakYNGKPVLIKK--TGTVYRGPNnaYIEMDVNIHNfSYPCRQALtSTLKPMFKEMIMRVGFVIEGQEDHELPECLLGNAELRGL 573
                677899******************************************999988888789**********************************99988874544556677888888877665567886.79**99999996643333333559******877..55566888889***********9988876615667799*************************9998876 PP

>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.4e-07   0.00094       4     103 ..      18     129 ..      15     130 .. 0.84

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 1.4e-07
                 EEEEEEEE.....TSSSCEEEEEEEEET.TEEEEESSSST.......TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHHH CS
  PF00169.24   4 eGyllkks.....ellktwkkryfvLts.nyLlyfksskk.......ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknll 103
                  G l kk+     + ++ w++r f  t+ ++L+y++ ++        +    p++s +l+  +    +  + a   ++++ ++i ++ +++++++ae++ e+k+W +al   +
   MMETSP1325-20131115|155_1  18 MGSLWKKRgglgrHMKEPWQPRAFGITHdGRLVYYEAKTVqeaenqgQGLRFPRQSLNLRASNAMWSQPED-ATDGPTQYLIVIEHDLGQRWKMCAENAAECKKWTDALSHFC 129
                 688888888999999999******9999899*****99889999999777788888888777655444433.34689********************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.91u 0.41s 00:00:01.32 Elapsed: 00:00:00.75
# Mc/sec: 1865.96
//
Query:       MMETSP1325-20131115|163_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.64
# Mc/sec: 277.08
//
Query:       MMETSP1325-20131115|162_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   12.1   1.3      0.056   12.0   0.9    1.0  1  PF04388.7 Hamartin protein


Domain annotation for each model (and alignments):
>> PF04388.7  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.9   4.1e-06     0.056     334     408 ..       7      76 ..       5      93 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.1e-06
  PF04388.7 334 spsslcglatppssiglsPlelslsashlssrvkgetgsgklelasestpstssppPaladdivraaaatirssa 408
                sp  ++  ++p+s  + sP   + +++h +  +++  gs  +ela    ++t+ ppP+  +    a+aat+ +++
  MMETSP1325-20131115|162_1   7 SPRYIAAASQPASHLPSSPWLHPSRTAHRTLTLQASGGSEVWELAR--PTATEAPPPGVGQR---APAATVTAKP 76 
                7888999999*********999***********************6..77889999998876...5555554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.67
# Mc/sec: 350.51
//
Query:       MMETSP1325-20131115|164_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.60
# Mc/sec: 351.47
//
Query:       MMETSP1325-20131115|165_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.26s 00:00:00.54 Elapsed: 00:00:00.49
# Mc/sec: 244.53
//
Query:       MMETSP1325-20131115|157_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.65
# Mc/sec: 1279.29
//
Query:       MMETSP1325-20131115|166_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 577.69
//
Query:       MMETSP1325-20131115|167_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.035   13.9   0.0      0.038   13.7   0.0    1.1  1  PF00784.12 MyTH4 domain


Domain annotation for each model (and alignments):
>> PF00784.12  MyTH4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.8e-06     0.038      33      76 ..       2      45 ..       1      65 [. 0.81

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.8e-06
  PF00784.12 33 tknpskesaekgWeLltlltstfpPSeellkylseflkkraheq 76
                ++np ++s ++g  Ll l ++ f P  ++ + ++ +l ++a++ 
   MMETSP1325-20131115|167_1  2 NNNPREQSRARGLMLLGLFLAHFHPPPAVENFVEALLIQQAADG 45
                89***********************9999999998777776544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.73
# Mc/sec: 219.94
//
Query:       MMETSP1325-20131115|169_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.70
# Mc/sec: 441.61
//
Query:       MMETSP1325-20131115|170_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-42  145.7   0.3    1.3e-42  145.4   0.2    1.1  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.4   0.2   9.7e-47   1.3e-42       2     154 ..      24     181 ..      23     182 .. 0.89

  Alignments for each domain:
  == domain 1    score: 145.4 bits;  conditional E-value: 9.7e-47
  PF00160.16   2 vdietsskGrivieLfedkaPktvenFlklakegfYdgtkfhrvikgfmiqgGdpsgkgangeekkaggesipdEikkkklkhkrGalamartgpepnsngsqFfItlgdaphlDg.....kytvFGkVvegmdvvekieavetde......kpeknvkiksvg 154
                 v++++ ++G+++ieL +d++P+tv+nFl+++ + fYdg++fhrvi++fmiqgG  +++ +    +k+++ +i++E +   l+++ G+++mart ++p+s++ qFfI++ d+ +lD      +y++FG+V++gmd+v +i++v+t+        p+++v+i+sv+
   MMETSP1325-20131115|170_1  24 VTMSIADYGDVTIELADDQTPITVANFLDYVDSDFYDGLIFHRVIENFMIQGGGYTSDLT----EKKTNSPIKNEAS-VGLSNTYGTISMART-SDPDSATDQFFINTVDNVFLDYsassaGYAAFGTVIDGMDLVVAISEVKTHTtkgfsdVPKTDVVIESVK 181
                 67888889**********************************************777654....3345558*****6.679************.68**************99***6666668*******************7777777899999999****987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.69
# Mc/sec: 722.38
//
Query:       MMETSP1325-20131115|174_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|173_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00089   18.8   0.0        8.2    6.7   0.0    3.9  4  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.044     6e+02       3      19 ..       4      21 ..       2      24 .. 0.74
   2 ?    1.2   0.1      0.04   5.4e+02       6      15 ..      30      41 ..      26      49 .. 0.53
   3 !    6.7   0.0    0.0006       8.2       2      21 ..      48      68 ..      47      69 .. 0.86
   4 !    4.7   0.0    0.0028        38       3      13 ..      72      83 ..      71      95 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.044
                SEEEETSS.BCB.CHHHHH CS
  PF00560.28  3 eeLdLsgN.nlt.slppsl 19
                ++ dLs+  nl  ++ + l
   MMETSP1325-20131115|173_1  4 KKVDLSRMsNLAgDIES-L 21
                67899998888777766.5 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.04
                EETSS.BCB.CH CS
  PF00560.28  6 dLsgN.nlt.sl 15
                +L ++ +l+ ++
   MMETSP1325-20131115|173_1 30 NLYFCeKLSgNI 41
                455555555442 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.0006
                ESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsn 21
                ++ L+L g+ +l+ ++   +++
   MMETSP1325-20131115|173_1 48 ITDLNLFGCkRLKgDIEV-FKG 68
                678**********99999.886 PP

  == domain 4    score: 4.7 bits;  conditional E-value: 0.0028
                SEEEETSS.BCB CS
  PF00560.28  3 eeLdLsgN.nlt 13
                ++ dL+g+ +lt
   MMETSP1325-20131115|173_1 72 TSMDLRGCsKLT 83
                689*****9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 423.64
//
Query:       MMETSP1325-20131115|175_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-57  194.3   0.0      2e-57  194.2   0.0    1.0  1  PF00069.20 Protein kinase domain
    3.5e-24   85.2   0.0    5.2e-24   84.6   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
     0.0005   19.0   0.0    0.00079   18.4   0.0    1.2  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.2   0.0   4.4e-61     2e-57      42     260 .]       8     254 ..       1     254 [. 0.96

  Alignments for each domain:
  == domain 1    score: 194.2 bits;  conditional E-value: 4.4e-61
                 HHHHHHHHHHHHHHH-TTB--EEEEEEE..STEEEEEEE--SC-EHHHHHH.HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH..........................HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20  42 ektavrElkilkklsHpnivkllevfee..kdelylvleyveggdlfdllk.kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks..........................eelkdlikkllekdpakRltaeeilkhpwl 260
                  +t++rE+++l++lsHpn v+l +v     +d ++lv+ey+e+ d+++l+    +++se e+k ++ q+l++++ylH+n i+HrDLK +N+L +++g+lk+aDFGla+ + ++ + +t  v+t +Y+APE+ll+++ y+++vD+W++G+il el+ +k++++g++e dq e i + l+++ e+ +p  ++ +                          ++ + ++++ll++dp  Rlta+++l h+++
   MMETSP1325-20131115|175_1   8 PITSLREVRLLRRLSHPNCVSLRGVAVGarRDAVFLVFEYCEH-DMASLIDaMGKRFSESEVKGLMVQLLRAVAYLHDNWIVHRDLKMSNLLYNSRGQLKLADFGLARLFGSPLKPMTPKVVTLWYRAPELLLGCETYGPAVDIWAAGCILGELIDHKPLMPGKTEPDQIEAIFRLLGCPDESVWPGVRNLPhvargavvltqhkhrptlndrfagwnRKGTAFLSELLTYDPVVRLTAHQALAHEYF 254
                 567889****************998876669**********99.78878877889***********************************************************************************************************************************999888******************************************************97 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.6   0.0   1.1e-27   5.2e-24      49     201 ..      12     163 ..       9     183 .. 0.90

  Alignments for each domain:
  == domain 1    score: 84.6 bits;  conditional E-value: 1.1e-27
                 HHHHHHHHHT-BTTB--BEEEBE..SSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE.EEHHHHHHH---HHHHHHTT CS
  PF07714.12  49 leeakimkklkhpnivkllgvct..keepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEiftl 201
                 l+e++++++l+hpn v+l gv +  +++ +++v+ey+++ d+ +++ +   ++++ +++  +++q+ ++++yL+++ +vHrdL   N L +++ + k++DfGLar     +  k ++ + + + + apE+l  ++ +  + D+W+ G++l E++ +
   MMETSP1325-20131115|175_1  12 LREVRLLRRLSHPNCVSLRGVAVgaRRDAVFLVFEYCEH-DMASLIDAM-GKRFSESEVKGLMVQLLRAVAYLHDNWIVHRDLKMSNLLYNSRGQLKLADFGLARLF--GSPLKPMTPKVVTLWYRAPELLLGCEtYGPAVDIWAAGCILGELIDH 163
                 68*********************766667********99.889999998.999******************************************************..77788888888988889****999876999*************9984 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.7e-07   0.00079      57     165 ..      10     110 ..       7     116 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.7e-07
  PF06293.9  57 rsvrEfrllkrLreagvpvpkpvaaaaqkvgleyqAdlltekleg.aqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDl 165
                +s rE+rll+rL       ++ va +a+++ +    +l+ e  e+ + +L + + k   ++e+  + l+ ++ r++a +h+  + H+dl + n+l + ++   ++ l D+
  MMETSP1325-20131115|175_1  10 TSLREVRLLRRLSHPNCVSLRGVAVGARRDAV----FLVFEYCEHdMASLIDAMGK--RFSESEVKGLMVQLLRAVAYLHDNWIVHRDLKMSNLLYNSRG---QLKLADF 110
                899*************************8877....6999*999647788888876..788888888999999***********************9998...7777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.72
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|177_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-10   40.3   3.0    2.8e-10   39.7   2.0    1.3  1  PF00397.21 WW domain
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.14   11.7   0.0    1.3  1  PF13464.1  Domain of unknown function (DUF4115)


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   2.0   4.1e-14   2.8e-10       4      31 .]      15      41 ..      13      41 .. 0.91

  Alignments for each domain:
  == domain 1    score: 39.7 bits;  conditional E-value: 4.1e-14
                SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  4 gWeersddddGrvYYyNheTgetqWekP 31
                +W+e+++dd Gr YY+N+ T et+We P
   MMETSP1325-20131115|177_1 15 PWVEVVTDD-GRRYYHNTVTSETSWEAP 41
                4**888889.****************98 PP

>> PF13464.1  Domain of unknown function (DUF4115)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     2e-05      0.14      10      35 ..      16      42 ..       9      63 .] 0.85

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2e-05
  PF13464.1 10 WveVrdadGkvlfegvlkaGesfev.e 35
               WveV   dG++ + +++   +s+e+ +
  MMETSP1325-20131115|177_1 16 WVEVVTDDGRRYYHNTVTSETSWEApP 42
               ***********************9943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.63
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|179_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|182_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.73
# Mc/sec: 190.40
//
Query:       MMETSP1325-20131115|181_1  [L=406]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-12   46.0   0.0    5.8e-12   45.3   0.0    1.4  1  PF00249.26 Myb-like DNA-binding domain
    5.4e-11   42.3   0.6    9.4e-11   41.5   0.4    1.4  1  PF13921.1  Myb-like DNA-binding domain
  ------ inclusion threshold ------
       0.59   10.2   2.9          1    9.4   2.0    1.3  1  PF12267.3  Protein of unknown function (DUF3614)
        1.6    7.6  11.0        2.2    7.1   7.6    1.1  1  PF01690.12 Potato leaf roll virus readthrough protein


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   1.7e-15   5.8e-12       3      45 ..      12      52 ..      10      54 .. 0.95

  Alignments for each domain:
  == domain 1    score: 45.3 bits;  conditional E-value: 1.7e-15
                SS-HHHHHHHHHHHHHTTS-.HHHHHHHCTTTS-HHHHHHHHH CS
  PF00249.26  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                 W++e+d ll+ + +++G+  W +I+++m+ gR+++ +k+rw+
   MMETSP1325-20131115|181_1 12 GWSEEDDALLISLQAEYGNS-WTKISSLMP-GRSENAVKNRWN 52
                6*****************99.*********.***********9 PP

>> PF13921.1  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.4   2.8e-14   9.4e-11       1      49 [.      13      62 ..      13      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 2.8e-14
  PF13921.1  1 WtdeEdeiLlklveeygndWseIaeel.grRtplacqdrwkn.kLrpkisr 49
               W++e+d  L++l  eygn W++I++ + g R+++a+++rw++  ++ ++++
  MMETSP1325-20131115|181_1 13 WSEEDDALLISLQAEYGNSWTKISSLMpG-RSENAVKNRWNSaACKRRRRQ 62
               ***************************88.***********9444444444 PP

>> PF12267.3  Protein of unknown function (DUF3614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.0    0.0003         1       7      94 ..      64     155 ..      59     173 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0003
  PF12267.3   7 pisasrkereyaasvedaglswvaksrv.....sfvevfvkrrrsrsaksklrfplvsvvveesvpalkspsrvvvkkvpvssekssssrgas 94 
                ++s ++  +e   ++e+++ + v+++r      +  e+  k + s++ +  +        ++ + + + s++r++v+ vp+s  +s s  ga 
  MMETSP1325-20131115|181_1  64 ALSTAKETHEDIMAREKKNAELVQAAREsiakaKLEEI-HKASGSEATEKAAEADVKRAETNDDQATIGSSERSLVDEVPASARESLSVDGAD 155
                56777888888888899999999999986666333344.77888888866666667777788899999***************9998876553 PP

>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   7.6   0.00065       2.2     256     421 ..      47     222 ..      24     243 .. 0.68

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00065
  PF01690.12 256 vnsateevlepeeee....ssseretsktpsaeesesdaekgllslekedekeevskesesdaeeedeeltralaekeaaaeevkdaaeevlqskeepseklvesdkpeltpgaskeaevaatvlaaesvkedrdplekreksdkaps.......kvlkarkekgvssllsssLegg 421
                 v++++++ + +  +     s+ +++++     e+++++ ++  ++   + + ee++k+s s+a+e++ e+++++ae++  ++ ++  ++++ ++  +   +++++d++++++  ++e   a+   ++e ++edr     ++k ++a+        + + ar++kg +  +++  +gg
   MMETSP1325-20131115|181_1  47 VKNRWNSAACKRRRRqlalSTAKETHEDIMAREKKNAELVQAARESIAKAKLEEIHKASGSEATEKAAEADVKRAETNDDQATIGSSERSLVDEVPASARESLSVDGADAARSPAREPAPAEEAEKGEATEEDRTGPGSKRK-NDAALalqslcdAADMARSQKGATVKGEEEAKGG 222
                 333344333333333244444444444444455555555778888999999********************************************99********************9999999999999999887665554.2222212222224444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       891  (0.0651697); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.78
# Mc/sec: 1247.33
//
Query:       MMETSP1325-20131115|184_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.096   11.2   0.0      0.096   11.2   0.0    1.0  1  PF14323.1 GxGYxY sequence motif in domain of unknown function


Domain annotation for each model (and alignments):
>> PF14323.1  GxGYxY sequence motif in domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0     7e-06     0.096     381     440 ..       5      62 ..       1      63 [] 0.74

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 7e-06
                ---EEEE--EEE-----------HHHHHHHHHHS---TTS----EEEEE-TTT--HHHHH CS
  PF14323.1 381 nskpvisergllwekldsenelkeeeitaqinsaaaniekapsFllvqvhvWskntdkvk 440
                +s +v+  r+  +++     +++ +++ +++ns  ++ ++ + +++v v+vWs ++++++
  MMETSP1325-20131115|184_1   5 DSGTVVTSRRHCLSTTFG--DVTPSQLVETLNSSPNDPTNTDGYTVVGVEVWSYGVSDIV 62 
                455555444444333333..35689****************************9998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.31s 00:00:00.62 Elapsed: 00:00:00.60
# Mc/sec: 251.62
//
Query:       MMETSP1325-20131115|172_1  [L=1308]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.6   0.0    0.00025   20.8   0.0    1.4  1  PF03828.14 Cid1 family poly A polymerase


Domain annotation for each model (and alignments):
>> PF03828.14  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.8e-08   0.00025       3      58 ..     685     738 ..     683     740 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 1.8e-08
                 --HHHHHHHH--------SEEB-------.EEGGG-GGG-S-.S-SSS--BB----T CS
  PF03828.14   3 geLLigFFeyYgseFdyenvvisirtggi.lskkekgwesnkernrfllaIeDPfel 58 
                 g LLi+F++++g+ F   +++ s+r+gg  ++    g +  +++   + +IeDP++ 
   MMETSP1325-20131115|172_1 685 GALLIDFLKLWGEDFTAGEEGFSVRRGGLrFPV--SGQV-PHPQAADPVVIEDPLNV 738
                 89************************9964443..3334.467899********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1308 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       602  (0.0440316); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.75u 0.34s 00:00:02.09 Elapsed: 00:00:01.50
# Mc/sec: 2089.62
//
Query:       MMETSP1325-20131115|180_1  [L=418]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-71  239.2   1.9    3.6e-71  239.2   1.3    2.1  2  PF07857.7 CEO family (DUF1632)
    4.9e-07   29.0  13.6    6.7e-07   28.5   0.2    2.5  3  PF06800.7 Sugar transport protein


Domain annotation for each model (and alignments):
>> PF07857.7  CEO family (DUF1632)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.2   1.3   5.3e-75   3.6e-71       1     246 [.      43     309 ..      43     320 .. 0.83
   2 ?    1.8   3.5     0.015     1e+02      52     104 ..     319     373 ..     313     398 .. 0.84

  Alignments for each domain:
  == domain 1    score: 239.2 bits;  conditional E-value: 5.3e-75
  PF07857.7   1 GlvaclvssvlfGsmfvPlkkfdskdGlfvqwvmslaillvglvvaatlgfpkfePlamlgGalyavgnalavpiieriGlavgiLiWntvnclvGWavtRfGlFgikaqvpksdlLnylGivlvvvggvlflfikseelepkkkvdrtsleleheeeiedkklvaeessevd..........ekraekn.........rllaillaivagvlyGltlvPviyikdkee...........lypgasqegldYvfsfylgifltstvilliYsivkk 246
                G++a+l++++ fGs+f+P kk+d++dG+++qwvm+ +i++ +++v+ +l  p+feP+amlgG l++ gn+++++ i+ iG+++g+L+W+++n+l+GWa++ fG+Fgi++   +++ Lny+G+v+ v++ ++++f+ +e  e+  +++ ts  l+++e+ +      ++s + +          +               ++l i++a++agv++G+ + Pv+++k  +                +s + +dYvfs+++giflts+v+l++Y ++++
  MMETSP1325-20131115|180_1  43 GYIAALIAVLGFGSNFIPAKKVDTGDGIYFQWVMCCGIWIASVIVQFALVNPQFEPFAMLGGWLWCSGNVMSLLAINYIGMGLGLLLWGSTNMLMGWASGTFGWFGIEKSDISNVPLNYVGVVVAVIALFMYMFVETESSEKPPETSLTSNLLDETEDAPYA----NKSNDLEggvdangrsaS-----TaareagaskKVLGIVMALLAGVFFGFNFDPVEMLKRTDTddttaapgwtsNTQDHSPNSIDYVFSHFSGIFLTSSVYLIAYLVYHH 309
                9**************************************************************************************************************************************999976666666666666544444333....222222122334444431.....1223366778*************************98776677766655322223345689*********************99875 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.015
  PF07857.7  52 pkfePlamlgGalyavgnalavpiieriGlavgiLiWntvnclvG..WavtRfGl 104
                p++   a ++G+ +a+++++ ++  +++ lav++ + ++   lvG  W+v  fG 
  MMETSP1325-20131115|180_1 319 PEVTLPAFISGFGWAIADIAWFVGNDNLSLAVAFPVITSGPGLVGalWGVFLFGE 373
                55555699***********************************998888877775 PP

>> PF06800.7  Sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   2.4    0.0002       1.3     159     227 ..      64     129 ..      17     174 .. 0.66
   2 ?   -3.9   0.1      0.72   4.9e+03     230     242 ..     235     247 ..     231     248 .. 0.73
   3 !   28.5   0.2   9.8e-11   6.7e-07      28     122 ..     305     399 ..     291     415 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0002
  PF06800.7 159 lvkvdglsallpqaiGmvigalilalakkkklvekatllniisGllwaignlflllsaqkvGvatafsl 227
                + + dg+     +  G+ i+++i+++a    +  +     ++ G lw  gn++ ll+ + +G+  +  l
  MMETSP1325-20131115|180_1  64 VDTGDGIYFQWVMCCGIWIASVIVQFAL---VNPQFEPFAMLGGWLWCSGNVMSLLAINYIGMGLGLLL 129
                3333455555566789999999999954...44455567899******************999888765 PP

  == domain 2    score: -3.9 bits;  conditional E-value: 0.72
  PF06800.7 230 lgvvistlggill 242
                lg+v++ l+g+++
  MMETSP1325-20131115|180_1 235 LGIVMALLAGVFF 247
                5677777777776 PP

  == domain 3    score: 28.5 bits;  conditional E-value: 9.8e-11
  PF06800.7  28 lilalvkqpeltlslkilivslisGllwalgQllqfkslklvgvskamP.istglQLvgasLigvlvfgeWstsvqvilGllaliliiiGvvltsl 122
                l++  +k ++  +  ++ + ++isG+ wa++ +  f   ++++ ++a P i++g  Lvg +L+gv++fge +++ ++   +la    +i v++ + 
  MMETSP1325-20131115|180_1 305 LVYHHFKGTKPYIVPEVTLPAFISGFGWAIADIAWFVGNDNLSLAVAFPvITSGPGLVG-ALWGVFLFGEIKGTANLRKLVLACCTTVIAVTMIAA 399
                444455555544445677889****************************4466777776.7*********99988876667777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       626  (0.045787); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.38s 00:00:01.16 Elapsed: 00:00:00.71
# Mc/sec: 1410.81
//
Query:       MMETSP1325-20131115|187_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.60
# Mc/sec: 219.67
//
Query:       MMETSP1325-20131115|188_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-32  110.8   0.0    3.4e-32  110.6   0.0    1.0  1  PF01873.12 Domain found in IF2B/IF5
  ------ inclusion threshold ------
      0.011   15.3   0.1      0.015   14.9   0.1    1.3  1  PF09300.5  Tectiviridae, minor capsid


Domain annotation for each model (and alignments):
>> PF01873.12  Domain found in IF2B/IF5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.6   0.0   4.9e-36   3.4e-32      13     117 ..      15     124 ..       4     125 .] 0.94

  Alignments for each domain:
  == domain 1    score: 110.6 bits;  conditional E-value: 4.9e-36
                 --..----S-----B--....--EEES-HHHHHHHH-SSHHHHHHHHHHH-------B-..--EEE----SSSHHHHHHHHHHTHHHHHT--SS-CCEEEEE---CEEEE CS
  PF01873.12  13 dkk.rfkipklevkieGk...kkTvisNfsdiakalnRdpeyllkyllaelgtagsldgk.drlvvkgkfeekkledvldkyikkyVlCkeCkspeTelikeerlillkC 117
                 d + r+k+p+++ k+eG+   +kT+i N++++a al+Rdp  ++k++++elg++++ + + +r++v+g+++++ l+++l  yi+ +VlC eC+ peT  ++++++i  kC
   MMETSP1325-20131115|188_1  15 DPAyRYKMPPIQGKVEGRgngIKTAIPNMTQVAMALHRDPGEVTKFFGCELGAQTTWSPDtERAIVNGAHTTSDLQNKLFVYIESFVLCPECRLPETIYSIKNEIIHAKC 124
                 4336******************************************************999************************************************* PP

>> PF09300.5  Tectiviridae, minor capsid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.1   2.2e-06     0.015      11      61 ..       8      59 ..       2      81 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 2.2e-06
  PF09300.5 11 agpvpipgpaptetmpllnyrvegriagiqqarqfmpfl.qgphravaeqty 61
                g  p+  pa    mp ++ +vegr  gi+ a   m  +    hr+  e t 
  MMETSP1325-20131115|188_1  8 QGTTPVEDPAYRYKMPPIQGKVEGRGNGIKTAIPNMTQVaMALHRDPGEVTK 59
               6899***************************998887551567888877764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.59
# Mc/sec: 507.70
//
Query:       MMETSP1325-20131115|190_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.058   13.0   0.1      0.085   12.5   0.1    1.3  1  PF05703.6 Auxin canalisation


Domain annotation for each model (and alignments):
>> PF05703.6  Auxin canalisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   6.2e-06     0.085     197     223 ..      54      80 ..      33      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.2e-06
  PF05703.6 197 vdvrspgdlltLTAaAaTaLRGaAtLk 223
                vd+  ++d++   A+AaT LR aA+L+
  MMETSP1325-20131115|190_1  54 VDAVCVDDVVGTQASAATKLRAAAALR 80 
                888999********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 794.58
//
Query:       MMETSP1325-20131115|191_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-14   52.4   0.0    5.3e-14   52.2   0.0    1.1  1  PF09353.5 Domain of unknown function (DUF1995)


Domain annotation for each model (and alignments):
>> PF09353.5  Domain of unknown function (DUF1995)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.0   3.9e-18   5.3e-14     129     208 ..       2      94 ..       1      96 [. 0.94

  Alignments for each domain:
  == domain 1    score: 52.2 bits;  conditional E-value: 3.9e-18
  PF09353.5 129 lNprLedaaavg..igsearelrkrFlstfevvYylrpleysg...........kgalfrcypepWqlfkedenggyklvaefesrPtleeve 208
                +N++L++++ ++    +++++l++rFls++ +vYylr++ ys+           +galfr++p+ Wq +  + +g+y+ v+  e rP l++ +
  MMETSP1325-20131115|191_1   2 FNLKLDTLRGDLglPAFPPKDLQYRFLSQVLPVYYLRTRTYSKsitkppflvnyQGALFRAFPGGWQSMLDVGKGKYRRVKLAEGRPALGQFK 94 
                8*****9996667656789*****************************************************99**************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.64
# Mc/sec: 512.97
//
Query:       MMETSP1325-20131115|189_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   13.2  10.6      0.049   13.1   3.8    2.4  2  PF04156.9 IncA protein
       0.41   10.7   7.6        1.1    9.3   3.2    2.5  2  PF05837.7 Centromere protein H (CENP-H)
       0.47   10.2   5.6        1.2    8.9   2.2    2.2  2  PF03938.9 Outer membrane protein (OmpH-like)
        1.3    9.2   7.2        2.2    8.5   0.8    2.5  2  PF06156.8 Protein of unknown function (DUF972)


Domain annotation for each model (and alignments):
>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   3.8   1.4e-05     0.049      85     168 ..      16      85 ..      10     110 .. 0.78
   2 ?    2.4   0.1     0.027        92     101     142 ..     288     329 ..     279     369 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.4e-05
  PF04156.9  85 esesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrsele 168
                ++e  +++l+++++qle ++ el  +l+  +e++ + +++ +++ +++ ++ +s kel++ i e                + ++
  MMETSP1325-20131115|189_1  16 AEEGAMADLQQKISQLEAKNLELRLRLKVGKEAESQVRKDQSKKIDEMVANLSSEKELSRIIDEYK--------------EKYS 85 
                5667789*******************************9999999999999999999999988877..............3333 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.027
  PF04156.9 101 eerlaeleseledleedlellqeelksleerlesleesikel 142
                +e +    s +++l+ d+ +l+e++  ++e++esle +   +
  MMETSP1325-20131115|189_1 288 RENQTLVRSMVDELNADQASLEELRLLVGEKNESLETEMNTF 329
                444444456667777777777777777777777777765554 PP

>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.2   0.00031       1.1      18      78 ..      20      78 ..      11      82 .. 0.86
   2 ?    1.2   0.0       0.1   3.5e+02      30      52 ..     287     309 ..     269     338 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00031
  PF05837.7 18 eLsdvekerlqlkqknrelvrellelkkkkesdredeelkeklekleaelkkskkkwevvk 78
                + d++++  ql+ kn el ++l+  k+ +++ r+  + ++k++++ a+l  +k+  +++ 
  MMETSP1325-20131115|189_1 20 AMADLQQKISQLEAKNLELRLRLKVGKEAESQVRK--DQSKKIDEMVANLSSEKELSRIID 78
               578999999*********99999888877777777..9999*************9999885 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.1
  PF05837.7  30 kqknrelvrellelkkkkesdre 52 
                 ++n++lvr++ ++ + +++  e
  MMETSP1325-20131115|189_1 287 LRENQTLVRSMVDELNADQASLE 309
                46667777776655444444333 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.2   0.00035       1.2      73     144 ..      13      86 ..       9      93 .. 0.80
   2 ?    1.1   0.0     0.085   2.9e+02      51      70 ..     281     312 ..     181     337 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00035
  PF03938.9  73 lsaeaekakeeelqakeqelqayaqqlq...aelqaeqqevlqklidkiadaikkvakekgltlVlttskvlyad 144
                lsa++e a++ +lq+k ++l+a+  +l    +  ++++ +v ++  +ki++ ++++  ek l+ +++++k  y+d
  MMETSP1325-20131115|189_1  13 LSAAEEGAMA-DLQQKISQLEAKNLELRlrlKVGKEAESQVRKDQSKKIDEMVANLSSEKELSRIIDEYKEKYSD 86 
                6777777776.6899999999999999955444455555699**************************9977775 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.085
  PF03938.9  51 e............lqakkkelqkeqknlqser 70 
                e            ++++ +el ++q+ l++ r
  MMETSP1325-20131115|189_1 281 EdqfhklrenqtlVRSMVDELNADQASLEELR 312
                04444433333336666666666666666544 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.8   0.00066       2.2      23      83 ..      20      78 ..       4      92 .. 0.70
   2 ?    3.7   0.4      0.02        67      14      55 ..     295     336 ..     279     372 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00066
  PF06156.8 23 eleelkkelkelleenaelkleneklrerleeleeeekkkekkkkkkklgegkdnLaklYe 83
                +++l++++++l  +n el+l  +  +e  +++++  ++++k +++    +++++L ++ +
  MMETSP1325-20131115|189_1 20 AMADLQQKISQLEAKNLELRLRLKVGKEAESQVRK--DQSKKIDEMVANLSSEKELSRIID 78
               57888999999999999998888777776666644..445555555556677777777654 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.02
  PF06156.8  14 eeqleelleeleelkkelkelleenaelkleneklrerleel 55 
                 + ++el+++ ++l++    + e+n++l++e +++ + l+ +
  MMETSP1325-20131115|189_1 295 RSMVDELNADQASLEELRLLVGEKNESLETEMNTFTHLLTPT 336
                223333344444444444455678888888888777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       880  (0.0643651); expected 273.4 (0.02)
Passed bias filter:                      529  (0.0386922); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.82u 0.38s 00:00:01.20 Elapsed: 00:00:00.73
# Mc/sec: 1263.83
//
Query:       MMETSP1325-20131115|192_1  [L=357]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-16   59.4   2.2    2.2e-14   53.5   0.9    2.8  2  PF00106.20 short chain dehydrogenase
    1.8e-10   40.6   0.1    3.2e-10   39.8   0.1    1.4  1  PF08659.5  KR domain
     0.0051   16.7   0.1      0.078   12.8   0.2    2.2  2  PF13460.1  NADH(P)-binding
     0.0087   15.7   0.0      0.013   15.1   0.0    1.2  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.9   6.5e-18   2.2e-14       2     137 ..      24     189 ..      23     193 .. 0.83
   2 ?   -0.8   0.0      0.33   1.1e+03     142     165 ..     213     236 ..     208     238 .. 0.86

  Alignments for each domain:
  == domain 1    score: 53.5 bits;  conditional E-value: 6.5e-18
                 EEEE---------HHHHHHHHHSSEEEEEEESS.........................SHHHHHHH..HHHHH..H--..-EEEEEE--TTSHHHHHHHHHHHHHH----SEEEEE---TT-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH....HH---EEEEEECH CS
  PF00106.20   2 tvliTGGlgglGlalArwLveegarhlvlvsrr........................edapgaael..iaele..alg..aevtvvacDvadrdalaallaeirkalgpldgvvhnagvlddgpleeltperlervlapkvtgawllheltld....adlgafvlfSSva 137
                 ++++TGG +g+Gl +A +L+++ga++++ +                           +++ +aae+  i      ++g   +v+ +++D+a+ d+++++ +e + a+++l+g+++nagv++ +  e  t++  e  + ++  g +ll+ l+ld    ++ +++v+ SS+a
   MMETSP1325-20131115|192_1  24 VYIVTGGNSGIGLITATQLAKQGAEVVIACRDVkrgeaaakaaspkkdskgdsgagaAEQVDAAEAntIL--SpkKKGalKDVVCMQLDLASFDSIRNFATEFKFAYKKLHGLINNAGVMNCP--EGKTADGHEMQFGTNHLGHFLLTNLLLDhlksSSPSRVVILSSCA 189
                 8*********************999888887668899999999999999887776653333333332333..255777557888889**********************************55..44457889999*****************9876559********98 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.33
                 STT.HHHHHHHCHHHCCHHHHHHH CS
  PF00106.20 142 spgqaaYaaakaaldalaesrrae 165
                 + g+ aY+ +k a   +a++++++
   MMETSP1325-20131115|192_1 213 YSGWPAYSQSKLANLLFAKELAKK 236
                 6899*********99999999986 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.1   9.3e-14   3.2e-10       2     138 ..      24     189 ..      23     193 .. 0.78

  Alignments for each domain:
  == domain 1    score: 39.8 bits;  conditional E-value: 9.3e-14
                -EEE----SHHHHHHHHHHHH-----EEEEE--..........................---------HHHHHH---..-EEEEE--TTSHHHHHHHH----TTS.---EEEE------..---TTT--HHHHHHHHHHHHHHHHHHHHHHCC----EEEEEEEGG CS
  PF08659.5   2 tyLvtGGlgglGlelarwLaergarhlvllsrsa.........................apdeeaeallaelealga..evtvvaaDvadrdavealleeveaeepplrGvvhaAgvlr..dallaemtaedlaavlapKvtGawnLhelladepldffvlfSSia 138
                +y+vtGG  g+Gl +a++La++ga+ ++ +   +                         + d+++++ + + +++ga   v+++++D+a+ d++++  +e++ ++++l+G ++ Agv++  ++  a+  + ++ +     +  +  L   l++++   +v++SS+a
  MMETSP1325-20131115|192_1  24 VYIVTGGNSGIGLITATQLAKQGAEVVIACRDVKrgeaaakaaspkkdskgdsgagaaeQVDAAEANTILSPKKKGAlkDVVCMQLDLASFDSIRNFATEFKFAYKKLHGLINNAGVMNcpEGKTADGHEMQFGTNHLGHFLLTNLLLDHLKSSSPSRVVILSSCA 189
                7**********************998887766656778888777777777777766666555555568888899999999*************************************9844555666666666666566666666666666667777777777776 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.2   2.3e-05     0.078       3      37 ..      27      61 ..      26     121 .. 0.81
   2 ?    1.6   0.0     0.064   2.2e+02      78     115 ..     167     206 ..     145     251 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.3e-05
  PF13460.1  3 viGAtGktGrrivkellarghevtalvRnpsklpe 37
               v+G+++ +G  ++ +l+++g ev+   R  ++ ++
  MMETSP1325-20131115|192_1 27 VTGGNSGIGLITATQLAKQGAEVVIACRDVKRGEA 61
               9***************************9987665 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.064
  PF13460.1  78 vkhlldalkaagvrrlvvvsaaglyr...dkpglfelldkp 115
                ++ lld lk+   +r+v++s+   ++   ++pg + ++++p
  MMETSP1325-20131115|192_1 167 TNLLLDHLKSSSPSRVVILSSCAHDKmldNPPG-HISFEDP 206
                5678999999999*******9997776634444.3333333 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   3.8e-06     0.013       5      86 ..      31     143 ..      29     196 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3.8e-06
                ------HHHHHHHH---EEEE---HH-.............................--------------..---..----TT-SGGHHHHHHHHHHH.---BSEEEEEEE---T CS
  PF13561.1   5 dnsigwaiakalaeaGaevilttwvpa.............................klkkkvqelakelp..adv..vplDvtseedvselaekvkedlggkiDilvhsianspe 86 
                +++ig+  a  la++Gaev++  ++ +                              +++++ + +k+ +  +dv  ++lD++s +++ ++a + k    +k+++l++ +++++ 
  MMETSP1325-20131115|192_1  31 NSGIGLITATQLAKQGAEVVIACRDVKrgeaaakaaspkkdskgdsgagaaeqvdaAEANTILSPKKK-GalKDVvcMQLDLASFDSIRNFATEFKFAY-KKLHGLINNAGVMNC 143
                489**********************9666677777777777777777777776654333333333333.234556578****************99996.*******99887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.40s 00:00:01.07 Elapsed: 00:00:00.74
# Mc/sec: 1156.08
//
Query:       MMETSP1325-20131115|193_1  [L=401]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-48  163.4   0.0    8.6e-48  162.6   0.0    1.4  1  PF00069.20 Protein kinase domain
    4.7e-19   68.4   0.0    6.7e-19   67.8   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
    2.4e-05   24.1   0.9      9e-05   22.1   0.0    2.2  3  PF01636.18 Phosphotransferase enzyme family
     0.0036   16.7   0.0     0.0062   16.0   0.0    1.4  1  PF01633.15 Choline/ethanolamine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.6   0.0   2.5e-51   8.6e-48       4     260 .]      46     384 ..      43     384 .. 0.90

  Alignments for each domain:
  == domain 1    score: 162.6 bits;  conditional E-value: 2.5e-51
                 EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH......-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH..HHCCB-HHHHHHHHHHHHHHHHHHHHT..CEE-S--SGGGEEEE...TT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST........HHHHHHHHHCCCHHTTS--GGGGCSHHH.....................................................................HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkkls......Hpnivkllevfeekdelylvleyveggdlfdllk..kegklseeeikkialqilegleylHsn..giiHrDLKpeNiLld...kkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge........seedqleliekilkkkleedepksssks.....................................................................eelkdlikkllekdpakRltaeeilkhpwl 260
                    lGsG+fG V++a + +++k vA+K +k + +  +++++   E+++l+++s      ++ iv  l+ f+  ++ +lv+e + + +l+++l+  + + +s + ++k+a q+l++l++l ++   +iH+DLKpeN+Ll    ++g++ki+DFG++++   ++++l+++  +r+Y+APEvll +  y+++vD+Ws+++il el tg+++f+g          ++d+l ++ ++ ++  +++ ++  +                                                                       + + d+++k+l++dp++R    e+l+hp+l
   MMETSP1325-20131115|193_1  46 SGPLGSGAFGIVVEAFDIHKNKLVALKLIKARPKFAQQAES---EAQLLRRISshgdfdSSRIVVWLDHFKWGSHECLVFERLSQ-SLYQVLAlsQFQGVSLNLVRKFAGQLLKSLDFLRHRdvDVIHCDLKPENVLLAepsSQGQVKIIDFGSSCM---THNQLHKYIQSRWYRAPEVLL-GIPYGQEVDIWSVACILSELHTGRPLFPGGhepltkrsASHDMLCRFSRVIGELPQHMLDEAVEVAhqnkankaagkkdkrltgvdmsdetfhwelsnlathrspkselakvhgadtwgprgkwarerhhssahyDLFLDFMEKMLRFDPKRRALPSELLQHPFL 384
                 5689****************************999999887...8888888844555557789********************99.99999987677888*******************665469*************855568899********85...7888999**************.****************************886888877777777777777777777777666666559999*********************************************************************************************96 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   0.0     2e-22   6.7e-19       6     202 ..      48     242 ..      43     283 .. 0.86

  Alignments for each domain:
  == domain 1    score: 67.8 bits;  conditional E-value: 2e-22
                 EE-------EEEEEEETTTTSSEEEEEEEEECT....TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTT..EEEST-SGGGEEEET...TTEEEE-----CEESTTTSCEEESTT-EECGGGS.-HHHHHHSEEEHHHHHHH---HHHHHHTTT CS
  PF07714.12   6 klGeGafGkVvegtlkgekekkevkVavKtlke....saeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskk..lvHrdLaarNvLlee...ekvvkisDfGLardiekddyykkkeeaklpvkWm.apEslkekkftsksDvWsfGvllwEiftlg 202
                  lG+GafG Vve+       +k+  Va+K +k+     ++ e+++++l+ ++   +++ ++iv  l  +  +++ ++v+e +++ +L+++L  ++ + ++l+ + kfa q+ k +++L +++  ++H dL   NvLl+e   + +vki DfG + ++      +++ ++ +  +W+ apE+l    + ++ D+Ws  ++l E+ t g
   MMETSP1325-20131115|193_1  48 PLGSGAFGIVVEAFDI----HKNKLVALKLIKArpkfAQQAESEAQLLRRISSHGDFDSSRIVVWLDHFKWGSHECLVFERLSQ-SLYQVLALSQFQGVSLNLVRKFAGQLLKSLDFLRHRDvdVIHCDLKPENVLLAEpssQGQVKIIDFGSSCMT------HNQLHKYIQSRWYrAPEVLLGIPYGQEVDIWSVACILSELHT-G 242
                 69***********988....77889999999764443344444777888888888888899*********99999*****9986.8******999***********************9886558*************877678********99888......66778899999*99*************************988.3 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.13   4.5e+02      23      52 ..      69      99 ..      61     147 .. 0.75
   2 !   22.1   0.0   2.6e-08     9e-05      96     198 ..      85     199 ..      81     201 .. 0.59
   3 ?   -1.1   0.1      0.32   1.1e+03      93     118 ..     261     287 ..     224     386 .. 0.57

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.13
                EEEEEESSC.CHHHHHHHHHHHHHHHCCSSS CS
  PF01636.18 23 yvlrrarpa.raaeelrrevallrlLakagi 52
                ++l+++ ++ + a+++++e++llr+++ +g 
   MMETSP1325-20131115|193_1 69 VALKLIKARpKFAQQAESEAQLLRRISSHGD 99
                5567766666688888888888888888764 PP

  == domain 2    score: 22.1 bits;  conditional E-value: 2.6e-08
                 HHHHHHHHHHHHS--TTSHGGHCTBCTHHHHHHHHHHHHHHHHHCTHH.HHHHHHHH........HHHHHHHHHHC......SS--EEB-SS-SGGGEEEE..TTTTEEEE---TT-BBE CS
  PF01636.18  96 ealaellaalhqadpaadpladflapyltllrllesataalvaselle.lleeleer........vlaalaallpg......aeppvllHgDlhpgNllvd..pddgrvgviDfedaglg 198
                 e  a+ll++++++     + +d ++  ++l+++   ++ +lv   l + l++ l+          + +++a +l++      +++  ++H+Dl+p N+l+   + +g+v +iDf+ +++ 
   MMETSP1325-20131115|193_1  85 ESEAQLLRRISSH-----GDFDSSRIVVWLDHFKWGSHECLVFERLSQsLYQVLALSqfqgvslnLVRKFAGQLLKsldflrHRDVDVIHCDLKPENVLLAepSSQGQVKIIDFGSSCMT 199
                 5556677777777.....333333222333333333333444444444433333333445555555555555555555558889999****************8888888*****98875 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 0.32
                 HHHHHHHHHHHHHHHS-.-TTSHGGHC CS
  PF01636.18  93 allealaellaalhqad.paadpladf 118
                 ++l ++ ++ ++l q+   +a  +a++
   MMETSP1325-20131115|193_1 261 DMLCRFSRVIGELPQHMlDEAVEVAHQ 287
                 444444444444444432222222222 PP

>> PF01633.15  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.8e-06    0.0062     116     171 ..     137     195 ..      72     202 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.8e-06
                 ---EE-HHHHHHHHHHHHHHHT.T----EEEE-S------EEE..-------EE---TT CS
  PF01633.15 116 qlklinledlekeleeleklle.ekespvvfCHnDlqegNill..nkeekklvlIDFEY 171
                 q++ ++l+ ++k + +l k l+   + +v   H+Dl ++N+ll   ++++++++IDF  
   MMETSP1325-20131115|193_1 137 QFQGVSLNLVRKFAGQLLKSLDfLRHRDVDVIHCDLKPENVLLaePSSQGQVKIIDFGS 195
                 56666666677777777777752445559999***********777899********65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.38s 00:00:01.12 Elapsed: 00:00:00.63
# Mc/sec: 1525.30
//
Query:       MMETSP1325-20131115|196_1  [L=414]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-65  220.6   0.0      2e-65  220.3   0.0    1.1  1  PF00069.20 Protein kinase domain
    4.7e-30  104.4   0.0    5.9e-30  104.1   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.3   0.0     3e-69     2e-65       2     260 .]     119     375 ..     118     375 .. 0.95

  Alignments for each domain:
  == domain 1    score: 220.3 bits;  conditional E-value: 3e-69
                 EEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHH.H-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--...HHHHHTSGGH CS
  PF00069.20   2 elleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.Elkilkkl.sHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRlt...aeeilkhpwl 260
                  l++ lG+GsfGkV+ ++k++tg ++A+K+lkk++ k+ k+ ++++ E ++l+   + p+i+++  +f+++ +ly+vley+ gg+lf +l++ +k+ e+ +++++ +++++l +lH++gi++rD+KpeN+Lld +g++k+ DFGlak    +  + +++++gt+eYmAPEvl+ + +++++vD+W+lG+ilye+ltg +p++++   d+++l+++ +  +l+ +   s     ++   ++ ll+++pa+Rl     ++i++h+++
   MMETSP1325-20131115|196_1 119 DLIKVLGKGSFGKVLLVEKSDTGATYAMKVLKKSKLKRAKQVERTKtERRVLEIAtENPFIMTMSFAFQTEARLYIVLEYCTGGELFFHLSRFRKFPEHVARFYVAELVCALGFLHRHGIVYRDMKPENVLLDAEGHVKLGDFGLAKDNiWSATQGARSICGTPEYMAPEVLN-KVGHGTSVDWWGLGMILYEMLTGLPPWYTK---DRQKLFQRLRYAPLRIPTTMS----LDCAGCVSALLCRNPAERLGavsTTDIKQHDFF 375
                 57899*****************************9999998887778******9978******************************************************************************************986777889*****************.******************************...999********9999998766....89****************986667889999886 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   0.0   8.7e-34   5.9e-30       3     228 ..     120     339 ..     118     363 .. 0.82

  Alignments for each domain:
  == domain 1    score: 104.1 bits;  conditional E-value: 8.7e-34
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECT..TSBHHHHHHHHHHHHHHHHT.-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---T CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke..saeeeekeefleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpe 228
                 l k lG+G+fGkV+  + +    ++  + a+K+lk+   ++ ++ e+  +e ++++   ++p i+++  ++ +e +l+iv+ey++gG+L   L +   +k+  +    +++++  ++ +L+++ +v rd+   NvLl+ e +vk++DfGLa+d   +  ++  ++     ++mapE+l++    +  D W  G++l+E++t g  p+ + + ++++++l+    l+ p+
   MMETSP1325-20131115|196_1 120 LIKVLGKGSFGKVLLVEKS----DTGATYAMKVLKKskLKRAKQVERTKTERRVLEIAtENPFIMTMSFAFQTEARLYIVLEYCTGGELFFHLSRF--RKFPEHVARFYVAELVCALGFLHRHGIVYRDMKPENVLLDAEGHVKLGDFGLAKDNIWS-ATQGARSICGTPEYMAPEVLNKVGHGTSVDWWGLGMILYEMLT-GLPPWYTKDRQKLFQRLRY-APLRIPT 339
                 7899*********998777....777788888886622344555788899*****988799999999999999999*****************998..777777777778888889*************************************9554.4444555556679******************************.8899999999998888753.3444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.87
# Mc/sec: 1140.34
//
Query:       MMETSP1325-20131115|199_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.21u 0.46s 00:00:00.67 Elapsed: 00:00:00.66
# Mc/sec: 170.65
//
Query:       MMETSP1325-20131115|201_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.85
# Mc/sec: 200.17
//
Query:       MMETSP1325-20131115|202_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-08   33.0   0.0    6.5e-08   32.5   0.0    1.2  1  PF13659.1  Methyltransferase domain
    3.8e-06   27.3   0.0    4.9e-06   26.9   0.0    1.2  1  PF12847.2  Methyltransferase domain
    2.9e-05   23.4   0.0     0.0088   15.3   0.0    2.1  2  PF05175.9  Methyltransferase small domain
  ------ inclusion threshold ------
      0.014   14.7   0.0       0.67    9.2   0.0    2.0  2  PF03602.10 Conserved hypothetical protein 95
      0.024   14.1   0.0      0.083   12.3   0.0    1.7  2  PF13847.1  Methyltransferase domain
      0.025   14.8   0.1      0.065   13.4   0.1    1.9  1  PF13649.1  Methyltransferase domain
      0.031   13.7   0.0        2.8    7.3   0.0    2.1  2  PF01170.13 Putative RNA methylase family UPF0020


Domain annotation for each model (and alignments):
>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   3.3e-11   6.5e-08      19      87 ..       5     110 ..       1     115 [. 0.87

  Alignments for each domain:
  == domain 1    score: 32.5 bits;  conditional E-value: 3.3e-11
  PF13659.1  19 lellaalllgvEldpraaalaarnlar...aglaervrvrqgdlrdl..................................aellragsfdlvvtnpPygpragar 87 
                 +  +a +++v+++ +a+ ++++n++     + ++r+r++qgd+  +                                  +el+++g+f ++++npPy+++++ +
  MMETSP1325-20131115|202_1   5 PASCKASGVAVDISHEALGICRANARAilgDRYQQRCRFVQGDAFSIsqkaanedgdcnvgggtsrcggggggegvsadliVELAKEGPFAVILCNPPYHQQHHHP 110
                33348999************998877644457799*********************************************9778999************9887765 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   2.5e-09   4.9e-06      19      79 ..       3     103 ..       1     115 [. 0.71

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 2.5e-09
  PF12847.2  19 larlrpgakvvgvDpseeslelarena...ksldleeriellqgda.keelsller....................................fDavllkg.l 79 
                +a + ++a  v+vD+s+e+l+++r+na      + ++r++++qgda +  ++  ++                                    f ++l++  +
  MMETSP1325-20131115|202_1   3 AAPASCKASGVAVDISHEALGICRANAraiLGDRYQQRCRFVQGDAfS-ISQKAANedgdcnvgggtsrcggggggegvsadlivelakegpFAVILCNPpY 103
                344458999******************76644556699********42.22222224667888888888888888888887777777777777777776654 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0022       4.3      52      91 ..       6      49 ..       1      58 [. 0.72
   2 !   15.3   0.0   4.5e-06    0.0088      87     116 ..      81     111 ..      73     116 .] 0.77

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0022
               H-TT----EEESBHHHHHHHHHHHHH----.....--EEE-STT CS
  PF05175.9 52 espelevtlvDinarAvesakanleanklen....vevlasdll 91
               +s +++ ++vDi+++A+ +++an++a   ++    +++++ d++
  MMETSP1325-20131115|202_1  6 ASCKASGVAVDISHEALGICRANARAILGDRyqqrCRFVQGDAF 49
               555666789***************98765543335667777765 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 4.5e-06
                E-STTTT--..--BS-EEE--------HHHH CS
  PF05175.9  87 asdlleeve.ekkfdlivsNPPfhagkatel 116
                  dl+ e+  e+ f +i++NPP h++++  +
  MMETSP1325-20131115|202_1  81 SADLIVELAkEGPFAVILCNPPYHQQHHHPH 111
                5677777766899*************97544 PP

>> PF03602.10  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.015        29      67     108 ..      11      55 ..       6      64 .. 0.67
   2 ?    9.2   0.0   0.00034      0.67     106     128 ..      86     107 ..      78     115 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.015
  PF03602.10  67 svvlvekdkkavavlkenlealklee...evavlredaaeallkl 108
                 s v+v+ +++a+ ++++n +a+  +    +++ ++ da +  +k+
   MMETSP1325-20131115|202_1  11 SGVAVDISHEALGICRANARAILGDRyqqRCRFVQGDAFSISQKA 55 
                 6789***************99864444434444555544444444 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00034
  PF03602.10 106 lklakkkeefdlvflDPPYakel 128
                  +l  k+ +f +++  PPY++++
   MMETSP1325-20131115|202_1  86 VEL-AKEGPFAVILCNPPYHQQH 107
                 444.57789***********996 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   4.3e-05     0.083      32      71 ..      13      57 ..       2      65 .. 0.79
   2 ?   -0.6   0.0      0.41   8.1e+02      71      88 ..      91     108 ..      77     114 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.3e-05
  PF13847.1 32 vGiDiseeaielAkeraqklgfe....nveFiqgdieelekl.le 71
               v +Dis ea+  ++ +a+    +    +++F qgd+++++++  +
  MMETSP1325-20131115|202_1 13 VAVDISHEALGICRANARAILGDryqqRCRFVQGDAFSISQKaAN 57
               78*************998754333338***********9987554 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.41
  PF13847.1  71 eesfDlvisnevlnalad 88 
                e +f ++++n +++ + +
  MMETSP1325-20131115|202_1  91 EGPFAVILCNPPYHQQHH 108
                377889999988855444 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   3.3e-05     0.065      25      66 ..      10      56 ..       2     113 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.3e-05
  PF13649.1 25 qrvigvDiseealelakerlss.....kgl.kvkfvqadaralpfeeg 66
               ++ ++vDis eal  ++ ++++         + +fvq+da +++++++
  MMETSP1325-20131115|202_1 10 ASGVAVDISHEALGICRANARAilgdrY-QqRCRFVQGDAFSISQKAA 56
               56789************99988776643.25*********99987543 PP

>> PF01170.13  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0    0.0098        19      63     101 ..      11      52 ..       2      64 .. 0.73
   2 ?    7.3   0.0    0.0014       2.8     100     120 ..      88     107 ..      78     114 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0098
  PF01170.13  63 klyglDidervvqgakeNaeea...gvgdkiefvkadaakle 101
                 + +++Di ++++  +++Na++    + +++  fv++da +++
   MMETSP1325-20131115|202_1  11 SGVAVDISHEALGICRANARAIlgdRYQQRCRFVQGDAFSIS 52 
                 5689***************98633345666677777776666 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0014
  PF01170.13 100 lellegevdvivtnpPYGerl 120
                 l  +eg + vi++npPY ++ 
   MMETSP1325-20131115|202_1  88 LA-KEGPFAVILCNPPYHQQH 107
                 33.78899*********7765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.73
# Mc/sec: 380.79
//
Query:       MMETSP1325-20131115|195_1  [L=1197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-21   77.2   0.0    2.2e-21   76.2   0.0    1.5  1  PF00881.19 Nitroreductase family
    8.7e-20   70.5   0.1    3.3e-19   68.6   0.0    1.9  2  PF09861.4  Domain of unknown function (DUF2088)
      2e-13   48.4   0.2    1.5e-05   23.8   0.0    2.8  2  PF00036.27 EF hand
    7.8e-12   43.9   0.0    1.7e-05   24.1   0.0    3.2  3  PF13405.1  EF-hand domain
    1.3e-11   44.2   0.1    4.3e-11   42.6   0.1    1.9  1  PF13499.1  EF-hand domain pair
    9.4e-11   41.0   5.2    0.00017   21.0   0.1    3.7  4  PF13833.1  EF-hand domain pair
    9.5e-11   40.4   0.5    8.6e-05   21.5   0.0    2.9  3  PF13202.1  EF hand
  ------ inclusion threshold ------
       0.14   11.8   0.9       0.38   10.4   0.6    1.7  1  PF13418.1  Galactose oxidase, central domain


Domain annotation for each model (and alignments):
>> PF00881.19  Nitroreductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.2   0.0   1.3e-24   2.2e-21       3     164 ..     134     283 ..     132     284 .. 0.87

  Alignments for each domain:
  == domain 1    score: 76.2 bits;  conditional E-value: 1.3e-24
  PF00881.19   3 sRrSiRkFddepvpkedlekileaarlaPsagnlqpwrfvvitdeelkerlaklaaealakaeaqaelllryrkkgnqklladapvlivvsrtkdkkerksddrsyeyalldaglaaqnlllaAaalGlgscpiggfdeeee.vrelLglp.deeeivllialG 164
                 +Rr+++ Fd +pv+++++ ++++aar+aP++  ++pwrf+ +  ee+ +++a   a+    ++ +++       ++++  +a+ p  +vv           d+    ++++ +++a+qn++la+ a+Glg+ +++g+ ++ + + el g++   +++ ++i  G
   MMETSP1325-20131115|195_1 134 NRRTTNSFDTTPVDDAVVLECVRAARYAPNHKMTEPWRFIQL-GEETINKIAAMNAATI--EDPKKR-------EKKHARWANVPGWMVV----TSRISEGDELTTTEDYAATCCAIQNFQLAMYAEGLGTKWTTGPITRTPeFYELVGVDgRADKVAGVIWYG 283
                 8*****************************************.8999999998855433..333332.......7888899999999999....8999999999999*******************************99999********5446666777665 PP

>> PF09861.4  Domain of unknown function (DUF2088)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.58   9.9e+02      63     112 ..      41      94 ..      38      97 .. 0.78
   2 !   68.6   0.0   1.9e-22   3.3e-19      52     194 ..     752     902 ..     741     913 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.58
  PF09861.4  63 DiTRptpskkilpllleelaeag...vkdeditilvalGtHra.qteeelkkll 112
                D+T  +ps+  ++++++++   g   +++e++ +l+  G+  a  t+ee+ +++
  MMETSP1325-20131115|195_1  41 DVTIDVPSDHRMRAVFDMVDTDGsgqISEEELGVLIRKGLNMAtATDEEVSAIF 94 
                99999**********999987654448899999999999986515677776665 PP

  == domain 2    score: 68.6 bits;  conditional E-value: 1.9e-22
  PF09861.4  52 kpgekvvivvsDiTRp.tpskkilpllleelaeagvkdeditilvalGtHraqteeelkkllGeevvkririvnhdaedkeelvylGtts.............rgtevevnklvae..adlvivtGsiepHefaGfsGGrKsilPGiaseetiranHsl 194
                 +++kv+++ +D+TR    + ++++l++e +      d+  +i+ alGtHr++tee++  ++G+++     +  hd+  ++++v +G+ s             +  + ++nklv+e   dl++ +G+++pHe+ G++  +K +++G+++ e+i+ +H  
  MMETSP1325-20131115|195_1 752 GARKKVMLLPPDYTRLhSRTGELVQLVYE-FYG----DKVTDIMPALGTHRPMTEEQITDMFGSDI-PIEAFKVHDW--RNDVVTVGEVSaamvraasdghvdEPWPAQLNKLVVEggHDLILSLGQVVPHEVLGMANYNKNLFIGVGGAESINFSHFI 902
                5679************5555666665555.555....58889**********************98.4556777999..889*******************99999*********95569*************************************86 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   8.6e-09   1.5e-05       2      28 ..      52      78 ..      51      79 .. 0.90
   2 !   21.9   0.0   3.6e-08   6.1e-05       1      23 [.      89     111 ..      89     116 .. 0.89

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 8.6e-09
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                ++ +F+++D+Dg+G+Is eE+  +++k
   MMETSP1325-20131115|195_1 52 MRAVFDMVDTDGSGQISEEELGVLIRK 78
                6889*****************988775 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 3.6e-08
                 HHHHHHHHHCTTTSSEBEHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfk 23 
                 e+  +F+ +D+Dg+G I+++E+ 
   MMETSP1325-20131115|195_1  89 EVSAIFRNLDTDGNGEIDYDEWW 111
                 6778*****************95 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0     1e-08   1.7e-05       1      28 [.      51      78 ..      51      83 .. 0.92
   2 !   15.7   0.0   5.2e-06    0.0088       4      22 ..      92     110 ..      89     117 .. 0.88
   3 ?   -1.5   0.0       1.7   2.9e+03       4      27 ..     815     837 ..     814     843 .. 0.76

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 1e-08
               HHH---GCC-------B---HHHHHHH. CS
  PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrk 28
               ++r++F++ D+dg+G+i+ eEL+ ++rk
  MMETSP1325-20131115|195_1 51 RMRAVFDMVDTDGSGQISEEELGVLIRK 78
               69*********************99985 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 5.2e-06
                ---GCC-------B---HH CS
  PF13405.1   4 eaFklfDkdgdGkidaeEL 22 
                ++F+ +D+dg+G+id +E 
  MMETSP1325-20131115|195_1  92 AIFRNLDTDGNGEIDYDEW 110
                79***************96 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 1.7
                ---GCC-------B---HHHHHHH CS
  PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                eaFk +D  ++  ++  E+ +a+ 
  MMETSP1325-20131115|195_1 815 EAFKVHDW-RNDVVTVGEVSAAMV 837
                79999986.578888888877775 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.1   2.5e-14   4.3e-11       2      62 ..      52     110 ..      50     114 .. 0.91

  Alignments for each domain:
  == domain 1    score: 42.6 bits;  conditional E-value: 2.5e-14
  PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEf 62 
                ++ +F++ D+dg+g+++ eeL  l+++ ++      ++e++ +if++lD++g+G ++++E 
  MMETSP1325-20131115|195_1  52 MRAVFDMVDTDGSGQISEEELGVLIRKGLNM--ATATDEEVSAIFRNLDTDGNGEIDYDEW 110
                5668*************************99..88899999999***************96 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1   9.7e-07    0.0017      22      47 ..      47      72 ..      36      78 .. 0.84
   2 !   21.0   0.1   9.7e-08   0.00017      19      47 ..      80     110 ..      74     112 .. 0.86
   3 ?   -4.1   0.0       6.9   1.2e+04       5      14 ..     732     741 ..     730     747 .. 0.75
   4 ?    2.4   0.0     0.062   1.1e+02      12      31 ..     788     808 ..     787     808 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 9.7e-07
  PF13833.1 22 lseeevdilfrefDtdgdGkisfeEF 47
               +s++ ++++f+++Dtdg+G is+eE 
  MMETSP1325-20131115|195_1 47 PSDHRMRAVFDMVDTDGSGQISEEEL 72
               89999*******************95 PP

  == domain 2    score: 21.0 bits;  conditional E-value: 9.7e-08
  PF13833.1  19 lkg..lseeevdilfrefDtdgdGkisfeEF 47 
                l++   ++eev ++fr +Dtdg+G i+++E+
  MMETSP1325-20131115|195_1  80 LNMatATDEEVSAIFRNLDTDGNGEIDYDEW 110
                4555589***********************8 PP

  == domain 3    score: -4.1 bits;  conditional E-value: 6.9
  PF13833.1   5 ItreeLkral 14 
                +t ++L++ +
  MMETSP1325-20131115|195_1 732 LTTDDLREGV 741
                899***9955 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.062
  PF13833.1  12 ral.allglkg.lseeevdilf 31 
                +++ a lg+++ ++ee+++++f
  MMETSP1325-20131115|195_1 788 DIMpA-LGTHRpMTEEQITDMF 808
                57755.499999*********9 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   5.1e-08   8.6e-05       1      22 [.      52      73 ..      52      76 .. 0.91
   2 !   15.9   0.0     3e-06    0.0052       3      22 ..      92     111 ..      90     113 .. 0.91
   3 ?   -3.6   0.0       4.4   7.5e+03      14      20 ..    1087    1093 ..    1087    1093 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 5.1e-08
               HHHHHHHH--S----B-HHHHH CS
  PF13202.1  1 lkdtFrafDlNgDGkIsreELk 22
               ++++F+ +D++g+G+Is eEL 
  MMETSP1325-20131115|195_1 52 MRAVFDMVDTDGSGQISEEELG 73
               6899****************95 PP

  == domain 2    score: 15.9 bits;  conditional E-value: 3e-06
                HHHHHH--S----B-HHHHH CS
  PF13202.1   3 dtFrafDlNgDGkIsreELk 22 
                ++Fr +D++g G I+ +E+ 
  MMETSP1325-20131115|195_1  92 AIFRNLDTDGNGEIDYDEWW 111
                57****************97 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 4.4
                 --B-HHH CS
  PF13202.1   14 GkIsreE 20  
                 G +sreE
  MMETSP1325-20131115|195_1 1087 GHLSREE 1093
                 89****9 PP

>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.6   0.00022      0.38      31      49 .]       5      25 ..       4      28 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00022
  PF13418.1 31 lyvfDlstntWtrl..pslPs 49
               ++vfD++t +W+++  p lP+
  MMETSP1325-20131115|195_1  5 IWVFDPETLEWNQVnkPELPP 25
               7***************55554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.54u 0.35s 00:00:01.89 Elapsed: 00:00:01.17
# Mc/sec: 2451.66
//
Query:       MMETSP1325-20131115|205_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00017   21.0   7.2      0.021   14.3   1.1    3.0  2  PF12799.2  Leucine Rich repeats (2 copies)
    0.00031   20.2   5.7        1.8    8.8   0.0    3.4  3  PF00560.28 Leucine Rich Repeat
     0.0015   18.3   2.8       0.22   11.4   0.2    2.6  3  PF05725.7  FNIP Repeat
     0.0053   16.6   5.4        1.7    9.0   0.1    3.6  3  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.015   15.1   9.5        2.9    8.1   0.6    3.3  3  PF13516.1  Leucine Rich repeat
       0.48   10.1   2.7          1    9.0   0.4    2.4  1  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   1.6   7.7e-05      0.17       2      24 ..       7      34 ..       6      37 .. 0.87
   2 !   14.3   1.1   9.3e-06     0.021       3      35 ..      30      61 ..      28      71 .] 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 7.7e-05
  PF12799.2  2 nLevLdLsnN.....nIkdlppelanLp 24
               + + L+L+++     nIkdlp ++ nL+
  MMETSP1325-20131115|205_1  7 SITNLNLRECsgikgNIKDLPQSITNLN 34
               6789******888888*********994 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 9.3e-06
  PF12799.2  3 LevLdLsnNnIk.dlppelanLpnLktLnLsnNp 35
                + L+L+++n++ d++  l+ +p L+tL+L ++ 
  MMETSP1325-20131115|205_1 30 ITNLNLRDTNLEgDIES-LKDCP-LQTLDLYYCS 61
               689*********99***.****9.******9984 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.4    0.0058        13       2      21 ..       8      32 ..       7      33 .. 0.78
   2 !    8.4   0.2     0.001       2.4       2      21 ..      30      49 ..      29      50 .. 0.85
   3 !    8.8   0.0   0.00078       1.8       2      15 ..      52      67 ..      51      71 .] 0.85

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0058
                ESEEEETSS.BCB.C...HHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.s...lppslsn 21
                ++ L+L+ +  ++ +   lp s+ n
   MMETSP1325-20131115|205_1  8 ITNLNLRECsGIKgNikdLPQSITN 32
                789******9999777777777666 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.001
                ESEEEETSSBCB.CHHHHHHH CS
  PF00560.28  2 LeeLdLsgNnlt.slppslsn 21
                ++ L+L+++nl+ ++ + l+ 
   MMETSP1325-20131115|205_1 30 ITNLNLRDTNLEgDIES-LKD 49
                789*********99998.775 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.00078
                ESEEEETSS.BCB.CH CS
  PF00560.28  2 LeeLdLsgN.nlt.sl 15
                L++LdL ++  lt ++
   MMETSP1325-20131115|205_1 52 LQTLDLYYCsELTgNI 67
                9********9999776 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0025       5.6       9      22 ..       3      15 ..       1      18 [. 0.79
   2 !   11.4   0.2   9.5e-05      0.22       7      32 ..      23      47 ..      20      47 .. 0.82
   3 ?   -2.3   0.0       1.8     4e+03       9      17 ..      62      70 ..      61      70 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0025
  PF05725.7  9 eLPsnleiLilgrd 22
                LP+++++L+l r+
  MMETSP1325-20131115|205_1  3 DLPKSITNLNL-RE 15
               59999999998.65 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 9.5e-05
  PF05725.7  7 igeLPsnleiLilgrdFnqkiligsL 32
               i  LP+++++L+l rd n +  i sL
  MMETSP1325-20131115|205_1 23 IKDLPQSITNLNL-RDTNLEGDIESL 47
               678**********.999877777665 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 1.8
  PF05725.7  9 eLPsnleiL 17
               eL+ n++ L
  MMETSP1325-20131115|205_1 62 ELTGNIKDL 70
               799999876 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.014        31       3      17 .]       8      27 ..       6      27 .. 0.64
   2 ?    3.4   0.3     0.053   1.2e+02       3      14 ..      30      41 ..      28      51 .. 0.79
   3 !    9.0   0.1   0.00074       1.7       3      14 ..      52      64 ..      50      71 .] 0.76

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.014
  PF13504.1  3 LkeLdLsgnr.....LtsLP 17
                ++L+L+ ++     +++LP
  MMETSP1325-20131115|205_1  8 ITNLNLRECSgikgnIKDLP 27
               589*****965222345665 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.053
  PF13504.1  3 LkeLdLsgnrLt 14
                ++L+L++++L+
  MMETSP1325-20131115|205_1 30 ITNLNLRDTNLE 41
               589***999875 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.00074
  PF13504.1  3 LkeLdLsgnr.Lt 14
               L++LdL +++ Lt
  MMETSP1325-20131115|205_1 52 LQTLDLYYCSeLT 64
               89*******8887 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.3     0.011        24       2      13 ..       6      17 ..       5      26 .. 0.81
   2 ?    8.1   0.6    0.0013       2.9       2      17 ..      28      43 ..      26      49 .. 0.85
   3 ?    6.8   0.1    0.0032       7.3       4      15 ..      52      64 ..      50      70 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.011
  PF13516.1  2 knLtsLdLsnNq 13
               k++t+L+L  + 
  MMETSP1325-20131115|205_1  6 KSITNLNLRECS 17
               689*****9995 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0013
  PF13516.1  2 knLtsLdLsnNqigde 17
               +++t+L+L ++++ ++
  MMETSP1325-20131115|205_1 28 QSITNLNLRDTNLEGD 43
               689*********9665 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0032
  PF13516.1  4 LtsLdLsnNq.ig 15
               L++LdL ++  ++
  MMETSP1325-20131115|205_1 52 LQTLDLYYCSeLT 64
               9*******97554 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.4   0.00044         1       2      35 ..      29      60 ..      28      71 .] 0.81

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00044
  PF13855.1  2 nLkeLdLsnNrlk.vipdgaFkglsnLkvLdLsgn 35
               ++++L+L++++l+ +i+  ++k+++ L++LdL ++
  MMETSP1325-20131115|205_1 29 SITNLNLRDTNLEgDIE--SLKDCP-LQTLDLYYC 60
               57889999988887887..999999.999999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 270.07
//
Query:       MMETSP1325-20131115|207_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-21   74.7   0.0    8.5e-21   74.3   0.0    1.1  1  PF00454.22 Phosphatidylinositol 3- and 4-kinase


Domain annotation for each model (and alignments):
>> PF00454.22  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.3   0.0   6.2e-25   8.5e-21     115     228 ..      12     124 ..       4     130 .. 0.86

  Alignments for each domain:
  == domain 1    score: 74.3 bits;  conditional E-value: 6.2e-25
                 HHHHHHHHHHHH---HHHHHH-------CCCEEE.E----EEE--------..----SSSS--SS---HHHHHH-------SHHHHHHHHHHHHHHHHHHCTHHHHHHHHHCCCCS CS
  PF00454.22 115 flearsqfarslaklsvldyilgngDRhldNilvdkktgklvhIDfGlclp..skheekpelvpfrltrpfseemreyldpskdeglfresceeilealrrdqdlltrlLqafvei 228
                 + ea+++fa+sla +sv+ y++ + DRh++Nil+ ++ g+l+hIDfG++l+       + e+ pf+lt++++ ++++    sk +  f  + +  + al  + + +++l++++ ++
   MMETSP1325-20131115|207_1  12 ITEAKRNFASSLAAYSVVCYVFAIKDRHNGNILL-DTEGHLIHIDFGFILGiaPGGAFSIETAPFKLTNEMVAVLGD--VHSKLFAEFVLLFCCGFLALQAQLQKIVSLIEIMCDD 124
                 56799*****************************.****************97667899****************88..7777777777777777777777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.73
# Mc/sec: 613.86
//
Query:       MMETSP1325-20131115|206_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.9e-14   51.6  16.0    9.9e-14   51.6  11.1    2.3  2  PF04116.8 Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> PF04116.8  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.5     0.042   5.7e+02      40      75 ..      50      87 ..      29     103 .. 0.58
   2 !   51.6  11.1   7.2e-18   9.9e-14       3     114 .]     160     276 ..     158     276 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.042
  PF04116.8 40 altafrihp.lealllalllllll.llllgtsllvill 75
               a+++f++ +  e ++la++++l+l +++  ++++v+++
  MMETSP1325-20131115|206_1 50 AIKSFVADAsPEGVMLAIASWLSLeVIFWVFAAWVHFM 87
               55555544445555555555533312222222222222 PP

  == domain 2    score: 51.6 bits;  conditional E-value: 7.2e-18
  PF04116.8   3 lallladfveylvHrllHevpflw.rfHkvHHssesltaltafrihplealllallll.....lllllllgtsllvillvvllgallylltHsgvhhrlkpllsylfvlpayHrlHHs 114
                ++l++ d+++y+vHr++H +++l+ +fHk+HH++     ++a +   +ea+l+ +++l     l+ +++ + + +++ l+++l  + +   H+g+   + + + +++    +H++HHs
  MMETSP1325-20131115|206_1 160 AFLFINDTMFYWVHRAMH-HKLLYkHFHKKHHEYYVSVSIAAEYSGIVEAVLADAAPLvagplLIGAYYKPVHGYTWCLWLFLRIWQTADAHCGYVLPWWGFGFPFLSDVLRHNWHHS 276
                7899**************.9****9*******9988888899998889999999888866665666778**************************99999999999999999*****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.68
# Mc/sec: 1134.75
//
Query:       MMETSP1325-20131115|200_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.64
# Mc/sec: 629.04
//
Query:       MMETSP1325-20131115|208_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-37  126.8   0.1    2.2e-37  126.6   0.1    1.1  1  PF01111.14 Cyclin-dependent kinase regulatory subunit


Domain annotation for each model (and alignments):
>> PF01111.14  Cyclin-dependent kinase regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   0.1   1.6e-41   2.2e-37       2      69 ..      12      79 ..      11      80 .. 0.98

  Alignments for each domain:
  == domain 1    score: 126.6 bits;  conditional E-value: 1.6e-41
  PF01111.14  2 ieYSdkYeddeyeYrhViLpkeiakkipkdkllseeewRaLGiqqskGWvhyevhkpephiLlfrrpl 69
                ieYS+kY+dd +eYrhViLpke+ak++pk +ll e+ewR++G+qqs+GW+hy++h+pephiLlfrrpl
   MMETSP1325-20131115|208_1 12 IEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPL 79
                9*****************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.65
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|212_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.28s 00:00:00.58 Elapsed: 00:00:00.56
# Mc/sec: 201.80
//
Query:       MMETSP1325-20131115|213_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-19   69.6   0.0    2.3e-19   69.5   0.0    1.1  1  PF08214.6 Histone acetylation protein


Domain annotation for each model (and alignments):
>> PF08214.6  Histone acetylation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   0.0   1.7e-23   2.3e-19     113     253 ..       3     108 ..       1     144 [. 0.86

  Alignments for each domain:
  == domain 1    score: 69.5 bits;  conditional E-value: 1.7e-23
  PF08214.6 113 sYLisikqrgytrkvilaLFtraqdqYLF...PessknpkKHvLddrgLlkWwikvldkaleesaksakaklvipgsdkyetrkfipaeaksktWtvghileeisddkavyeiPlFpDDpkgrfleelieegrwksvsldqfwe 253
                +Y++ +++rg++ ++i+a+++ ++d+Y++   P ++k pk     d++L+kW++++l +a        k+ +v  ++++y++  +++++++                 +++ +P+F++D++ + +e lie        ++++  
  MMETSP1325-20131115|213_1   3 AYMDFVRRRGFIAAHIWACPPLKGDDYILychPPDQKVPK-----DERLRKWYMSMLHDAE-------KEGIVTSVTNIYDE--YLKNTEN-----------------TATVLPYFEGDYWVGEIESLIEK-------IEEEGA 108
                59999***********************************.....****************.......**************..9999999.................799******************98.......444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.65
# Mc/sec: 534.57
//
Query:       MMETSP1325-20131115|211_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.095   12.0   0.2        7.8    5.9   0.1    2.1  2  PF04578.8 Protein of unknown function, DUF594


Domain annotation for each model (and alignments):
>> PF04578.8  Protein of unknown function, DUF594
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1   0.00057       7.8      14      36 ..       2      24 ..       1      26 [. 0.83
   2 ?    4.3   0.0    0.0018        24      24      43 ..      48      67 ..      46      73 .. 0.92

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00057
  PF04578.8 14 evlaevWvelLvyaApscraeaH 36
               +++ + W+ lLv+     + + H
  MMETSP1325-20131115|211_1  2 KMMLRLWASLLVFYGALAHPTLH 24
               68999********9877777777 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0018
  PF04578.8 24 LvyaApscraeaHakqLaqg 43
               ++y+++s++ +a a +L+ g
  MMETSP1325-20131115|211_1 48 VMYISDSNDSKARAMRLRDG 67
               68***************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.72
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|210_1  [L=567]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-08   34.2  10.0    2.4e-08   33.4   6.9    1.4  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    2.8e-07   30.4   4.8    2.8e-07   30.4   3.3    1.9  2  PF08614.6  Autophagy protein 16 (ATG16)
     0.0015   18.1   8.1     0.0029   17.2   5.6    1.4  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
     0.0035   16.7  11.5     0.0074   15.6   7.9    1.5  1  PF00038.16 Intermediate filament protein
  ------ inclusion threshold ------
      0.016   14.6   4.9      0.028   13.8   3.4    1.4  1  PF14447.1  Prokaryotic RING finger family 4
       0.14   12.1  11.9      0.032   14.1   5.7    1.7  2  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
       0.55    9.6   2.8       0.85    9.0   1.9    1.2  1  PF08597.5  Translation initiation factor eIF3 subunit
       0.56   10.2  15.0        1.7    8.6   8.2    2.9  2  PF13747.1  Domain of unknown function (DUF4164)
       0.67   10.1  11.2       0.05   13.7   4.1    1.8  2  PF08232.7  Striatin family
        1.3    8.8   8.4       0.14   12.0   0.5    2.4  2  PF02084.10 Bindin
        3.5    7.5  14.4       0.34   10.8   6.1    2.0  2  PF09304.5  Cortexillin I, coiled coil
        4.9    5.9  12.5        1.1    7.9   6.3    1.6  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
          7    5.2   5.5         10    4.7   3.8    1.1  1  PF07946.9  Protein of unknown function (DUF1682)


Domain annotation for each model (and alignments):
>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   6.9   2.2e-11   2.4e-08       2      42 ..     470     506 ..     469     510 .. 0.95

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 2.2e-11
  PF13920.1   2 kktCvvClereadvlllpCgHlclCeeCaerllkrkkkCpi 42 
                ++tC+ C +r+ d++llpCgH+++Ce+C++r+      Cpi
  MMETSP1325-20131115|210_1 470 SQTCIACADRQIDCVLLPCGHQVMCEACSKRV----TLCPI 506
                689*****************************....9**98 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   3.3   2.7e-10   2.8e-07      47     163 ..     302     421 ..     285     428 .. 0.82
   2 ?   -1.3   0.1       1.4   1.4e+03      88     106 ..     451     469 ..     435     488 .. 0.51

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 2.7e-10
  PF08614.6  47 kkevqs.......sassstsasgsgsdaaiaeleqklaklreelaelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkekekaletlqDElaslnlelsll 163
                     s       sas  + ++g+  + + ++l +k++ l +el+ l  +r++la++l  +  + + +r+  ++ ++e a++++e+++ + + ++lee  +e  +  e ++DEla+   +l++l
  MMETSP1325-20131115|210_1 302 T----SatgpshsSASGLPHTRGTLDQESSESLRAKVLTLEQELTTLRWSREQLARSLDVVRADAQSSRAVVQAVQAERATVEAELEKERGRGRQLEETAQEERRRREGVEDELAAARATLDQL 421
                2....1223322244444556666777778888899999*****************************************************************************99999887 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 1.4
  PF08614.6  88 kkrgelaqrllllneelee 106
                +++ ++++ l + n++l++
  MMETSP1325-20131115|210_1 451 QTQRAMTRALREQNQSLQD 469
                2222222222222222222 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   5.6   2.8e-06    0.0029       2      33 ..     470     501 ..     469     506 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.8e-06
  PF13923.1   2 rfsCpiCleelenpviltpCgH.lyCkkCieqw 33 
                +++C  C ++ +++v l+pCgH ++C+ C +++
  MMETSP1325-20131115|210_1 470 SQTCIACADRQIDCV-LLPCGHqVMCEACSKRV 501
                579***********5.7*****569****9875 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   7.9   7.1e-06    0.0074      23     152 ..     330     457 ..     322     480 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 7.1e-06
  PF00038.16  23 LEqqnkkLeakieeleekksaevsklkelyekelaelrkqldeltkerarleleldnlreeledlrekyekelnkresaEaelaklrkdldeatlarvdleakvesl.keeleflkklheeEvkelqkqik 152
                 L +++  Le++++ l+   +++ ++  ++  +  ++ r +++++++era +e+el++ r   ++l e  ++e+++re +E+ela+ r+ ld++  + +++   + sl   ele l+ +h e ++++q+ ++
   MMETSP1325-20131115|210_1 330 LRAKVLTLEQELTTLRWS-REQLARSLDVVRADAQSSRAVVQAVQAERATVEAELEKERGRGRQLEETAQEERRRREGVEDELAAARATLDQLSGSCSEA--SLASLpVSELERLQGVHLEGLQQTQRAMT 457
                 555666677777777776.7777888899999999********************************************************987766654..45555257899999999998888888763 PP

>> PF14447.1  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   3.4   2.7e-05     0.028       3      44 ..     466     506 ..     464     516 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2.7e-05
  PF14447.1   3 lqqpeqpcllcgtvgtkrvllpCgH.lvpdetFdlerYsgCPf 44 
                ++q+ q+c++c   ++  vllpCgH + ++++   +r   CP+
  MMETSP1325-20131115|210_1 466 SLQDSQTCIACADRQIDCVLLPCGHqVMCEAC--SKRVTLCPI 506
                689**********************5559999..345555665 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   5.7   3.1e-05     0.032      17     111 ..     325     419 ..     321     424 .. 0.94
   2 ?   -1.9   0.0       2.6   2.8e+03      54      71 ..     446     463 ..     433     474 .. 0.57

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.1e-05
  PF10473.4  17 readlLkdkvenLErELelseenqelvileaenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervseLeklnsslknlLe 111
                + +++L+ kv +LE+EL +++  +e+++  ++  +a +++ ++ +++++ e  ++e +L + r    +L +  qe++ r ++ e  +   + +L+
  MMETSP1325-20131115|210_1 325 ESSESLRAKVLTLEQELTTLRWSREQLARSLDVVRADAQSSRAVVQAVQAERATVEAELEKERGRGRQLEETAQEERRRREGVEDELAAARATLD 419
                57899****************************************************************************99999888887775 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 2.6
  PF10473.4  54 vetLktkieemaeelkdL 71 
                 e+L++   +m++ l++ 
  MMETSP1325-20131115|210_1 446 LEGLQQTQRAMTRALREQ 463
                455555555555555543 PP

>> PF08597.5  Translation initiation factor eIF3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.9   0.00081      0.85      60     133 ..     366     439 ..     346     474 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00081
  PF08597.5  60 kelkakieekekakkekkekekekkeeeldeedeaaekerlrkleeesDLknAadlfggl....kkaltkdtdlesld 133
                +++ +++    +a++++ e+e ek++    +++e a++er+r+   e +L++A+ ++++l    ++a+ ++ ++++l+
  MMETSP1325-20131115|210_1 366 RAVVQAV----QAERATVEAELEKERGRGRQLEETAQEERRRREGVEDELAAARATLDQLsgscSEASLASLPVSELE 439
                3333332....233333333333333456899**************************99777744444444444444 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   8.2    0.0017       1.7       4      74 ..     328     402 ..     323     404 .. 0.67
   2 ?   -0.2   0.4      0.94   9.9e+02      49      73 ..     405     429 ..     397     431 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0017
  PF13747.1   4 eeleaalkrLeaaldsLe...saverrleaerkr.deleaeiqaldadrsrLaqeLdkaearaerleeanrEvsr 74 
                e+l+a + +Le+ l++L    +++ r l+  r+  ++ +a +qa++a+r+  ++eL k + r ++lee+++E  r
  MMETSP1325-20131115|210_1 328 ESLRAKVLTLEQELTTLRwsrEQLARSLDVVRADaQSSRAVVQAVQAERATVEAELEKERGRGRQLEETAQEERR 402
                444455555555555554111334444554444445556666***************************999655 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.94
  PF13747.1  49 srLaqeLdkaearaerleeanrEvs 73 
                +  ++eL +a+a +++l+  ++E+s
  MMETSP1325-20131115|210_1 405 EGVEDELAAARATLDQLSGSCSEAS 429
                4468899999999999999999986 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.1   4.8e-05      0.05      30     123 ..     330     423 ..     317     434 .. 0.89
   2 ?   -2.7   0.1       5.8   6.1e+03      36      59 ..     445     468 ..     439     473 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.8e-05
  PF08232.7  30 mkarIakLeGerrglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaeeeeleekkdeesessakdekelkksreylkkslq 123
                ++a++  Le e  +l+ ++e+L r ++ + + ++ +ra +++++a+ ++ +++ +k+     +lee+++ee  + +  e+el+ +r  l++ + 
  MMETSP1325-20131115|210_1 330 LRAKVLTLEQELTTLRWSREQLARSLDVVRADAQSSRAVVQAVQAERATVEAELEKERGRGRQLEETAQEERRRREGVEDELAAARATLDQLSG 423
                9*****************************************99999999888899999999999999999999999*********99999765 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 5.8
  PF08232.7  36 kLeGerrglenlkedLkrrvkmLe 59 
                +LeG +++++++++ L+++ + L+
  MMETSP1325-20131115|210_1 445 HLEGLQQTQRAMTRALREQNQSLQ 468
                566666666666666665554444 PP

>> PF02084.10  Bindin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.5   0.00013      0.14      37     114 ..      24     100 ..      10     103 .. 0.68
   2 ?   -0.0   1.1      0.63   6.6e+02      38      85 ..     256     304 ..     233     336 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00013
  PF02084.10  37 ggpvGgagsaaavagggapggevqggggeslgpaeagevieeaedaeseledysss.sieed..detisaevlekikavLG 114
                 +  +G   s+++v ggg  gg v+gggg+ ++  ++++ + +   a+s+ ++ ss+ s+eed  ++ ++a+ l   +a+LG
   MMETSP1325-20131115|210_1  24 AATTGSSHSGSSVVGGGGSGGGVAGGGGGGGND-QSESRPTS---AMSHRSEASSErSVEEDlvGHHLDADFLSWYRAMLG 100
                 556788888889999999999999999555554.33333333...44444444443034444669999******9999999 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 0.63
  PF02084.10  38 gpvGgagsaaavaggg.apggevqggggeslgpaeagevieeaedaese 85 
                  ++Gg+g a+a +++g + + +v+gg g++ g a  +  +++a++++s 
   MMETSP1325-20131115|210_1 256 AAIGGGGLANADSTKGpTKSSKVPGGVGSASGVAVLAAAPADAKSSTSA 304
                 3445554444443333134455555555555554444444333333222 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   6.1   0.00033      0.34      10      81 ..     326     398 ..     318     416 .. 0.75
   2 ?   -3.0   2.3       6.5   6.8e+03       8      64 ..     405     464 ..     392     482 .. 0.40

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00033
  PF09304.5  10 sknelankLagLersledekvsqeeLakqkdeLksllasleaqkaerekrlrelqakidell.knlekeklak 81 
                s ++l+ k+ +Le++l   + s+e+La+  d +++  +s +a  + ++   + ++a+++  + ++ ++e  a+
  MMETSP1325-20131115|210_1 326 SSESLRAKVLTLEQELTTLRWSREQLARSLDVVRADAQSSRAVVQAVQAERATVEAELEKERgRGRQLEETAQ 398
                56789************************99988888887777777777777777777654436666666666 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 6.5
  PF09304.5   8 easknelankLagLersled.ekvsqeeL.akqkdeLks.llasleaqkaerekrlrelq 64 
                e    ela   a+L++   +   +s   L + + ++L+  +l+ l++ +   ++ lre +
  MMETSP1325-20131115|210_1 405 EGVEDELAAARATLDQLSGScSEASLASLpVSELERLQGvHLEGLQQTQRAMTRALREQN 464
                444444444444444321111222222223333333322123333333333333333333 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   6.3    0.0011       1.1      69     147 ..     324     402 ..     314     432 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0011
  PF10186.4  69 kerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklnslesltaekRs 147
                +e  e +r+++ +l++e+  +r ++e+l ++l+  r d+++s  +++  +++ a++++e+++ + +  +le++ +e+R+
  MMETSP1325-20131115|210_1 324 QESSESLRAKVLTLEQELTTLRWSREQLARSLDVVRADAQSSRAVVQAVQAERATVEAELEKERGRGRQLEETAQEERR 402
                4555677777777777777777777777777777777777777777777777777777777777777777777777776 PP

>> PF07946.9  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   3.8    0.0098        10     244     298 ..     355     410 ..     329     417 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0098
  PF07946.9 244 iDklk.klelreevlkkvkklReevekkllkakeeerqEeaqekkeekkkeereak 298
                 D ++  ++ ++ v++ v+  R+ ve +l k+    rq+e+ +++e++++e  e +
  MMETSP1325-20131115|210_1 355 LDVVRaDAQSSRAVVQAVQAERATVEAELEKERGRGRQLEETAQEERRRREGVEDE 410
                56666656778899*************************88666666666555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       919  (0.0672177); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 1.14u 0.36s 00:00:01.50 Elapsed: 00:00:01.05
# Mc/sec: 1294.03
//
Query:       MMETSP1325-20131115|214_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.032   13.8   4.7      0.086   12.4   0.7    2.3  2  PF01097.13 Arthropod defensin


Domain annotation for each model (and alignments):
>> PF01097.13  Arthropod defensin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1    0.0083   1.1e+02      22      27 ..      86      91 ..      82      94 .. 0.85
   2 ?   12.4   0.7   6.3e-06     0.086       9      22 ..     101     114 ..      99     116 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.0083
                ---EET CS
  PF01097.13 22 GGyCng 27
                G+yC+g
   MMETSP1325-20131115|214_1 86 GAYCSG 91
                9***98 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 6.3e-06
                 HHHHHHHHHTT--- CS
  PF01097.13   9 saCaaHCllkGrrG 22 
                 saCa HC ++G  G
   MMETSP1325-20131115|214_1 101 SACAVHCASRGWVG 114
                 8*********9766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.66
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|215_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-24   85.3   0.0    4.5e-24   84.8   0.0    1.2  1  PF00069.20 Protein kinase domain
    1.1e-07   31.1   0.0    4.7e-07   29.0   0.0    1.8  2  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.8   0.0   6.6e-28   4.5e-24     136     259 ..       3     184 ..       1     185 [. 0.96

  Alignments for each domain:
  == domain 1    score: 84.8 bits;  conditional E-value: 6.6e-28
                 -EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH...........................................................HHHHHHHHHHT-SSGGGS--HHHHHTSGG CS
  PF00069.20 136 elkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks...........................................................eelkdlikkllekdpakRltaeeilkhpw 259
                 +lk++DFG+a k + ++++ t +  +r Y+APE+ l + ey +++D+Ws+Gv lyel+tgk++f g++++ +l+l + ++++  +++++ +  +                                                             +l dl++k+l+ dp+kR+t+ ++lkhpw
   MMETSP1325-20131115|215_1   3 VLKLCDFGSAFKENAPDNDPTPYIQSRFYRAPEITL-GLEYNRQIDIWSIGVCLYELFTGKVMFMGHDSNGMLNLWQDVKGRFPNRMIKRHILSYnelekvphfeenfqfrqhttdkvtgmgvvrvvdisakpkndlrrmlmssragaddqklvLQLADLLDKVLALDPEKRMTVGQALKHPW 184
                 67********9989**********************.******************************99999999999999888888887766669999***********************************************************************************9 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   6.9e-11   4.7e-07     140     219 ..       2      78 ..       1      96 [. 0.77
   2 ?   -0.2   0.0     0.058     4e+02     213     254 ..     137     178 ..     128     182 .. 0.77

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 6.9e-11
                 TEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHH CS
  PF07714.12 140 kvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellk 219
                 +v k++DfG a + +     ++ +    +  + apE+    +++ + D+Ws Gv+l+E+ft g+  + g +++ +l+l +
   MMETSP1325-20131115|215_1   2 RVLKLCDFGSAFKENA--PDNDPTPYIQSRFYRAPEITLGLEYNRQIDIWSIGVCLYELFT-GKVMFMGHDSNGMLNLWQ 78 
                 5789*****8877622..333344455566777****************************.888888887777777664 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.058
                 HHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHH CS
  PF07714.12 213 evlellkegkrlekpekcpeelyelmkqCweeepeeRptfke 254
                 ++ ++l +++  +  +k   +l++l+ + ++ +pe+R t  +
   MMETSP1325-20131115|215_1 137 DLRRMLMSSRAGADDQKLVLQLADLLDKVLALDPEKRMTVGQ 178
                 555666666667777888889999*************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.59
# Mc/sec: 800.14
//
Query:       MMETSP1325-20131115|216_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-05   22.2   0.0    9.7e-05   21.6   0.0    1.3  1  PF05186.8 Dpy-30 motif
  ------ inclusion threshold ------
       0.02   14.6   0.0      0.043   13.6   0.0    1.6  1  PF13405.1 EF-hand domain
      0.075   12.5   0.0        1.2    8.6   0.0    2.3  3  PF13833.1 EF-hand domain pair
       0.13   11.3   0.0       0.32   10.1   0.0    1.5  2  PF06207.6 Protein of unknown function (DUF1002)


Domain annotation for each model (and alignments):
>> PF05186.8  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   2.8e-08   9.7e-05       1      33 [.      14      47 ..      14      52 .. 0.94

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 2.8e-08
  PF05186.8  1 parkYLnktvaPiLlqGLte.lakeRPeDPiefL 33
               +a +Y+++++++iL+q L + l  eRPeDP +fL
  MMETSP1325-20131115|216_1 14 EAQAYISEKRVDILFQELGTrLVFERPEDPNAFL 47
               5789**************999***********99 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.3e-05     0.043       3      30 ..      73      99 ..      71     100 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.3e-05
               H---GCC-------B---HHHHHHH.H- CS
  PF13405.1  3 reaFklfDkdgdGkidaeELrdaLrksl 30
               + +F++fD +g G+i+ ++  +aL  sl
  MMETSP1325-20131115|216_1 73 MTLFDMFDPTGRGEISTAQYDNALL-SL 99
               579*************999888877.66 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.079   2.7e+02      21      33 ..      10      30 ..       2      33 .. 0.72
   2 ?    8.6   0.0   0.00035       1.2      19      43 ..      62      88 ..      50      90 .. 0.76
   3 ?   -3.3   0.0       1.9   6.4e+03       5      14 ..     116     125 ..     115     129 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.079
  PF13833.1 21 g........lseeevdilfre 33
               +        +se+ vdilf e
  MMETSP1325-20131115|216_1 10 DprkeaqayISEKRVDILFQE 30
               45555567799999*****87 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00035
  PF13833.1 19 lkg..lseeevdilfrefDtdgdGkis 43
               +++  ++ e+v +lf++fD  g G is
  MMETSP1325-20131115|216_1 62 VPStfFTTEDVMTLFDMFDPTGRGEIS 88
               344779999*************99987 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 1.9
  PF13833.1   5 ItreeLkral 14 
                ++r+++ r++
  MMETSP1325-20131115|216_1 116 VDRATFARCV 125
                7888887765 PP

>> PF06207.6  Protein of unknown function (DUF1002)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.35   1.2e+03     108     138 ..       1      31 [.       1      75 [. 0.68
   2 ?   10.1   0.0   9.2e-05      0.32      78     100 ..      86     108 ..      85     117 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.35
  PF06207.6 108 GeaALtGiykAyeasGekldeekkevAneel 138
                G+aA++G+    +++ + ++e+++++  +el
  MMETSP1325-20131115|216_1   1 GSAAMAGLPDPRKEAQAYISEKRVDILFQEL 31 
                6777777766666666666666666555555 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 9.2e-05
  PF06207.6  78 evteemyanAlltaGvedaevtv 100
                e++  +y nAll+ Gve+ +vt 
  MMETSP1325-20131115|216_1  86 EISTAQYDNALLSLGVENPTVTL 108
                58899*************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 567.56
//
Query:       MMETSP1325-20131115|194_1  [L=683]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   11.0   2.8       0.15   10.1   1.9    1.3  1  PF09726.4 Transmembrane protein
        1.1    9.6  31.5        2.9    8.3  10.9    2.7  2  PF07172.6 Glycine rich protein family


Domain annotation for each model (and alignments):
>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.9   2.2e-05      0.15     313     421 ..     550     662 ..     520     674 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 2.2e-05
  PF09726.4 313 slagsaeelalkkd...snsssaeeksakskssksaktskrsksnsspk.shksaagsvssssvkkneskdkkasksssgaldskkvisglsandtvkekkaeaklskpdale 421
                  ags  +l +++        ++++   +skss+ ++t ++++ +++p+   +++++s+ss+++ ++++ ++ a  + + + d+++  +g+ a  ++ +  ++a +s p+a++
  MMETSP1325-20131115|194_1 550 CRAGSPISLRIRRTarpRAVGASAAPGLSSKSSPLQQTFGATRRPNQPQrRTQHTNSSSSSAAAVSSSEPPRDADGNIGTSFDRQPSFNGMPATTSAMDALTHAASSAPKASK 662
                556666677777764432223334445567777778887777777777515678888888888888889999999999999****************************9985 PP

>> PF07172.6  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.4    0.0018        12      41      77 ..     284     320 ..     254     340 .. 0.54
   2 ?    8.3  10.9   0.00042       2.9      62      91 ..     377     408 ..     346     411 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0018
  PF07172.6  41 kdekyggggkhggGgygggggggngGGGykgggGgyg 77 
                  + + g g+hggG  +   + g  GGG+ g  Ggy+
  MMETSP1325-20131115|194_1 284 GGTARPGPGNHGGGQPHKRARTGDRGGGGGGSSGGYD 320
                2222223333333333333344444444444444444 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00042
  PF07172.6  62 ggngGGGykgggGgygg..gggggeggyGgGy 91 
                +g +GGG   ggGg gg  gggg +gg GgGy
  MMETSP1325-20131115|194_1 377 QGFNGGGAAVGGGGAGGgsGGGGSGGGDGGGY 408
                45566666666666666444555556669999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (683 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.99u 0.37s 00:00:01.36 Elapsed: 00:00:00.70
# Mc/sec: 2338.16
//
Query:       MMETSP1325-20131115|218_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.68
# Mc/sec: 1064.26
//
Query:       MMETSP1325-20131115|217_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-07   31.6   3.5    1.6e-05   25.0   0.3    2.1  2  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.3   1.2e-09   1.6e-05      31     149 ..      73     198 ..      56     201 .. 0.63
   2 !   14.8   0.1   1.7e-06     0.023      31      67 ..     184     216 ..     151     272 .. 0.62

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 1.2e-09
                 --------TTT------------------S--TT--....STT.--...-..--...--S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT- CS
  PF00504.16  31 eaEliHGRvAMlavlGalvpelltklsaaskfaelpa...wae.ag...g..ls...lptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiafl 149
                 +aE  +GR AM +++ ++ + +++  + +++ ++ ++   w + a    +  +s    + l+a +  l+++++ +++  ++ ++       +a  G++  d   ++   + ++  +  +Ei nGR+AM++++
   MMETSP1325-20131115|217_1  73 KAERWNGRHAMFGWVVIIGTLYAQAHHLIPNPTQPLNlkeWGTlATisgKdtISnerAVILIAHVHALFVSLCSAWLPLNYMDSLLL----DADSGEV--DEPAIGvFPKFQTGITMGAEILNGRMAMMGLI 198
                 79*************999998777755544444333333455433244313322344333445567777777777666665443333....2345553..333333345667788899************87 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 1.7e-06
                 --------TTT------------------S--TT--. CS
  PF00504.16  31 eaEliHGRvAMlavlGalvpelltklsaaskfaelpa 67 
                  aE+ +GR+AM++ + a    ++t++++    +++++
   MMETSP1325-20131115|217_1 184 GAEILNGRMAMMGLITASGYSIITGTPF----LSTVD 216
                 4788888888888888888887776332....23333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.67
# Mc/sec: 1001.46
//
Query:       MMETSP1325-20131115|220_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-37  126.8   0.0      7e-37  126.7   0.0    1.0  1  PF00225.18 Kinesin motor domain
  ------ inclusion threshold ------
       0.12   11.7   0.2       0.41    9.9   0.0    1.7  2  PF00270.24 DEAD/DEAH box helicase


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.7   0.0     1e-40     7e-37      64     189 ..       2     119 ..       1     120 [] 0.91

  Alignments for each domain:
  == domain 1    score: 126.7 bits;  conditional E-value: 1e-40
                 HHHHHHHH----EEEEEE--TT---HHHHH-.TTTTC---HHHHHHHHHHHHHCCTTTHTEEEEEEEEEEEEETTEEEETTSTTTTS-SS.BEEEECTTTCCEEECT---EEESSHHHHHHHHHHH CS
  PF00225.18  64 kplvesvleGynvtifaYGqtgsGKTytmeGkeeeeekGiipraleelFeeieeekeekekefsvkvsylEiYnekiyDLLesekekkkkklkiredskkgkvyvkgltevevksaeevlellekg 189
                 +p+v+svl+Gynv+ifaYGqtgsGKTytm+G    e++G+  r+leelF + +++++e   e +++vs+lEiY+e+i+DLL+++    +++l+ir+  + g  yv +lt+v+v+ ++ev+ell+ +
   MMETSP1325-20131115|220_1   2 SPVVTSVLDGYNVCIFAYGQTGSGKTYTMMGP--PENRGVNTRTLEELFVKSAQRSSE--VEDKIQVSILEIYCEQIRDLLAEH--VGSQRLEIRQGDH-G-NYVPNLTWVPVSVIDEVFELLNLA 119
                 599****************************6..6679*************9998887..778*******************98..46667****9887.4.7********************986 PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0     6e-05      0.41       8      34 ..       5      33 ..       2      49 .. 0.78
   2 ?   -0.3   0.0     0.083   5.7e+02     100     116 ..      64      80 ..      36     117 .. 0.52

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 6e-05
                HHHHHSS-EEE..EEC-TT---HHHHHHH CS
                xxxxxxxxxxx..xxxxxxxxxxxxxxxx RF
  PF00270.24  8 iplilgggdvl..vaaeTGsGKTlaflip 34
                ++ +l+g +v+  + ++TGsGKT  ++ p
   MMETSP1325-20131115|220_1  5 VTSVLDGYNVCifAYGQTGSGKTYTMMGP 33
                5667777787644789*******988765 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.083
                 -SEEEEEHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
  PF00270.24 100 vdivvgTpgrlddlvst 116
                 v i+    +++ dl+ +
   MMETSP1325-20131115|220_1  64 VSILEIYCEQIRDLLAE 80 
                 44554445554444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 495.80
//
Query:       MMETSP1325-20131115|219_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-08   34.6   0.0    2.3e-08   33.9   0.0    1.3  1  PF00072.19 Response regulator receiver domain


Domain annotation for each model (and alignments):
>> PF00072.19  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   1.7e-12   2.3e-08       1      81 [.      33     127 ..      33     136 .. 0.86

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 1.7e-12
                 EEEESSSHH....HHHHHHHHHHHTTSEEEE..EESSSHHHHHHHHHHH.....ESEEEEESS-TT----HHHHHHHHHT...TTSEEEEEES-T CS
  PF00072.19   1 vlivdDepl....vrellrqalekegyeeva..eaddgeealellkekd.....pDlillDiempgmdGlellkeireee...pklpiivvtahg 81 
                 +l+vdD+p+    ++ +lr+al+  g ++v+   a +geea + ++++      + l+ +D++mp++dGl+++++ r+e     ++pi+++++++
   MMETSP1325-20131115|219_1  33 ILVVDDSPVtlktQCAVLRRALDANGGSNVGidRAMNGEEACAAVRAMSevgesYLLVTMDLSMPKCDGLAATEHVRSELyrgATTPIVALSSFD 127
                 89*****963333778999999955555666559***********99999999***********************887778999******9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.37s 00:00:01.02 Elapsed: 00:00:00.60
# Mc/sec: 1521.69
//
Query:       MMETSP1325-20131115|224_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-06   27.8   2.8      3e-06   26.9   1.9    1.4  1  PF14369.1  zinc-finger
     0.0015   18.0   0.6     0.0022   17.5   0.4    1.2  1  PF01155.14 Hydrogenase expression/synthesis hypA family
  ------ inclusion threshold ------
      0.014   15.1   0.3      0.019   14.6   0.2    1.3  1  PF08772.6  Nin one binding (NOB1) Zn-ribbon like
      0.022   14.4   0.6      0.034   13.8   0.4    1.4  1  PF12773.2  Double zinc ribbon
      0.057   13.4   0.2      0.074   13.0   0.2    1.2  1  PF05495.7  CHY zinc finger
       0.09   12.2   1.2        6.6    6.3   0.1    2.2  2  PF13719.1  zinc-ribbon domain
       0.11   12.3   3.5       0.49   10.2   2.3    2.0  2  PF09723.5  Zinc ribbon domain
       0.18   11.5   1.0       0.26   11.0   0.7    1.2  1  PF06093.8  Spt4/RpoE2 zinc finger
       0.18   11.4   0.8       0.23   11.1   0.6    1.1  1  PF07295.6  Protein of unknown function (DUF1451)
       0.19   11.3   1.2       0.46   10.0   0.8    1.7  1  PF05191.9  Adenylate kinase, active site lid
       0.23   11.0   1.7         12    5.6   0.2    2.3  2  PF13717.1  zinc-ribbon domain
       0.34   11.1   1.5       0.49   10.6   0.1    1.9  2  PF03966.11 Trm112p-like protein
        0.6    9.8   4.2        1.9    8.2   0.2    2.2  2  PF12760.2  Transposase zinc-ribbon domain
       0.76    9.1   5.7          9    5.6   3.9    2.1  1  PF07503.7  HypF finger


Domain annotation for each model (and alignments):
>> PF14369.1  zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   1.9   3.1e-09     3e-06       5      33 ..      58      84 ..      54      85 .. 0.82

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 3.1e-09
  PF14369.1  5 ChqCrrfvrispsedddvlCPhCgggFvE 33
               Ch Crr  r+++s ++ + CP+Cg+ F E
  MMETSP1325-20131115|224_1 58 CHACRRVYRVQTS-NPTA-CPRCGSEFFE 84
               *********9653.5556.********65 PP

>> PF01155.14  Hydrogenase expression/synthesis hypA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.4   2.3e-06    0.0022      66      98 ..      51      84 ..      45      87 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 2.3e-06
                ----EEE-SSSS-EE-S--S-.---SSSSS---E CS
  PF01155.14 66 evpvsvrCreCgeeveleera.leCpkCgsadve 98
                ++p ++ C++C++ +++++++ ++Cp+Cgs+ +e
   MMETSP1325-20131115|224_1 51 SIPNQLLCHACRRVYRVQTSNpTACPRCGSEFFE 84
                68999**************99999*****98765 PP

>> PF08772.6  Nin one binding (NOB1) Zn-ribbon like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.2   1.9e-05     0.019      10      33 ..      56      81 ..      39      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.9e-05
  PF08772.6 10 lrChaCfkltk..dmtkqFCpkCGna 33
               l ChaC ++++   ++ + Cp+CG++
  MMETSP1325-20131115|224_1 56 LLCHACRRVYRvqTSNPTACPRCGSE 81
               68*******9965666789*****85 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.4   3.5e-05     0.034      13      40 ..      56      83 ..      48      88 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.5e-05
  PF12773.2 13 rfCpqCgaklkeataeevlCpsCgesvs 40
                 C +C+   + +t ++ +Cp+Cg++  
  MMETSP1325-20131115|224_1 56 LLCHACRRVYRVQTSNPTACPRCGSEFF 83
               5799999999977888888999998755 PP

>> PF05495.7  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   7.6e-05     0.074      40      70 ..      54      81 ..      39      82 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7.6e-05
  PF05495.7 40 kevlCgkCkkeqtvkeykceakekCskCklv 70
               +++lC +C++  +v++   ++ + C+ C + 
  MMETSP1325-20131115|224_1 54 NQLLCHACRRVYRVQT---SNPTACPRCGSE 81
               489***********64...44679****875 PP

>> PF13719.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.017        17       5      15 ..      58      68 ..      55      71 .. 0.83
   2 ?    6.3   0.1    0.0067       6.6      28      35 ..      75      82 ..      72      84 .. 0.61

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.017
  PF13719.1  5 CpnCkakyeid 15
               C +C  +y++ 
  MMETSP1325-20131115|224_1 58 CHACRRVYRVQ 68
               99999999997 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0067
  PF13719.1 28 CskCghvf 35
               C++Cg  f
  MMETSP1325-20131115|224_1 75 CPRCGSEF 82
               56665555 PP

>> PF09723.5  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1      0.12   1.2e+02      24      39 ..      53      66 ..      45      70 .. 0.61
   2 ?   10.2   2.3   0.00051      0.49       8      34 ..      58      80 ..      55      84 .. 0.70

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.12
  PF09723.5 24 ddeteCPeCgsekvrr 39
               + +  C +C++  v+r
  MMETSP1325-20131115|224_1 53 PNQLLCHACRR--VYR 66
               66667777776..333 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00051
  PF09723.5  8 CekCgkefevlqsisdddeteCPeCgs 34
               C +C +++ v +      +t+CP+Cgs
  MMETSP1325-20131115|224_1 58 CHACRRVYRVQT----SNPTACPRCGS 80
               777765554443....3589******9 PP

>> PF06093.8  Spt4/RpoE2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.7   0.00026      0.26       4      30 ..      58      86 ..      55      88 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00026
  PF06093.8  4 CllCklvktedqFeeegCpnC..ellelk 30
               C+ C++v   ++ + + Cp C  e++e++
  MMETSP1325-20131115|224_1 58 CHACRRVYRVQTSNPTACPRCgsEFFEFQ 86
               99******9999999******87788776 PP

>> PF07295.6  Protein of unknown function (DUF1451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.6   0.00023      0.23     112     142 ..      55      84 ..      52      88 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00023
  PF07295.6 112 eLvCekCghklelekpseieaCpkCgkkeFe 142
                +L C++C + +++++ +  +aCp+Cg++ Fe
  MMETSP1325-20131115|224_1  55 QLLCHACRRVYRVQTSNP-TACPRCGSEFFE 84 
                689******999986655.89******9997 PP

>> PF05191.9  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.8   0.00047      0.46       3      31 ..      57      82 ..      56      84 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00047
               EES----EEBTTTB--S-----S-----E CS
  PF05191.9  3 vCpdCGrvYhikfnpPkvdgvCDkCgepL 31
                C +C rvY +++     +  C  Cg+++
  MMETSP1325-20131115|224_1 57 LCHACRRVYRVQTSN---PTACPRCGSEF 82
               6*********98875...68999999987 PP

>> PF13717.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.022        22       5      15 ..      58      68 ..      55      71 .. 0.84
   2 ?    5.6   0.2     0.012        12      28      35 ..      75      82 ..      73      83 .. 0.54

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.022
  PF13717.1  5 CpnCkakyeid 15
               C  C  +y++ 
  MMETSP1325-20131115|224_1 58 CHACRRVYRVQ 68
               999**999997 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.012
  PF13717.1 28 CskCghvf 35
               C++Cg  f
  MMETSP1325-20131115|224_1 75 CPRCGSEF 82
               55555555 PP

>> PF03966.11  Trm112p-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00051      0.49      52      66 ..      54      68 ..      15      70 .. 0.82
   2 ?   -0.6   0.1       1.7   1.6e+03      56      63 ..      75      82 ..      74      83 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00051
                EEEE-TTS-EEEEEE CS
  PF03966.11 52 geLvCpncgraYpIk 66
                ++L C++c+r+Y+++
   MMETSP1325-20131115|224_1 54 NQLLCHACRRVYRVQ 68
                79***********96 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 1.7
                -TTS-EEE CS
  PF03966.11 56 CpncgraY 63
                Cp+cg  +
   MMETSP1325-20131115|224_1 75 CPRCGSEF 82
                88888655 PP

>> PF12760.2  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.2      0.15   1.5e+02      35      45 ..      53      63 ..      44      64 .. 0.71
   2 ?    8.2   0.2     0.002       1.9      18      27 ..      72      81 ..      69      88 .. 0.73

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.15
  PF12760.2 35 rglyqCkeCrk 45
               + +  C++Cr+
  MMETSP1325-20131115|224_1 53 PNQLLCHACRR 63
               56777999997 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.002
  PF12760.2 18 gfvCphCgsr 27
                  Cp+Cgs+
  MMETSP1325-20131115|224_1 72 PTACPRCGSE 81
               456*****95 PP

>> PF07503.7  HypF finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   3.9    0.0093         9       2      31 ..      58      82 ..      57      84 .. 0.69

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0093
  PF07503.7  2 CpeClkEyndplnRRfhaqfisCtnCGPrl 31
               C +C++ y     R     +++C+ CG  +
  MMETSP1325-20131115|224_1 58 CHACRRVY-----RVQTSNPTACPRCGSEF 82
               55555555.....4444579*******876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        90  (0.0065828); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.65
# Mc/sec: 328.12
//
Query:       MMETSP1325-20131115|221_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.44s 00:00:01.14 Elapsed: 00:00:00.95
# Mc/sec: 971.16
//
Query:       MMETSP1325-20131115|222_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-42  144.0   0.1    2.3e-40  138.0   0.1    2.2  1  PF14124.1 Domain of unknown function (DUF4291)


Domain annotation for each model (and alignments):
>> PF14124.1  Domain of unknown function (DUF4291)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.0   0.1   1.7e-44   2.3e-40       6     180 ..      38     213 ..      32     214 .. 0.77

  Alignments for each domain:
  == domain 1    score: 138.0 bits;  conditional E-value: 1.7e-44
  PF14124.1   6 eydeetitvYqAynseiaeaavkaqrfvespfkteRmtWiKpsflWmmyRsgyatkknqeriLaikikregfeelLkkavlssykekeskseeewkkklkkskvrvQWDperdlklkkl.........eyrsiQiGlkgelvkeyaeewivkiedvtdlvreikkllker.......eleeakkllpkErv 180
                e d+e + vYqA+++ei ++avk+qrf +++fk eRmtWiKpsf+W++yRsgya+k+nqer+L +k+ +e+  ++L+++ + +   ++                rvQWDp rdl  ++          ++r iQiG+kg+l + y+e+ +++iedvt+l +++ ++ ++         l + +  lp Er+
  MMETSP1325-20131115|222_1  38 EWDDEGVYVYQAFKEEICDWAVKNQRFGGPQFKPERMTWIKPSFAWVLYRSGYASKHNQERVLKVKLPHEAMAHILSSCSTGHGGGGT--------------IGRVQWDPARDLMASEPkkheprkmlRKRDIQIGMKGRLSRFYVEN-TLSIEDVTELSHAVGHAHAAAdaghvqeALGQLRDDLPVERP 213
                6799************************999*********************************************998888874443..............346777777766543222222222239**********999888876.569******999886655444233333333344445566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.56
# Mc/sec: 1065.52
//
Query:       MMETSP1325-20131115|227_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-21   74.6   0.2    7.4e-21   74.5   0.2    1.0  1  PF00764.14 Arginosuccinate synthase


Domain annotation for each model (and alignments):
>> PF00764.14  Arginosuccinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   0.2   5.4e-25   7.4e-21      44     102 ..       2      60 .]       1      60 [] 0.98

  Alignments for each domain:
  == domain 1    score: 74.5 bits;  conditional E-value: 5.4e-25
  PF00764.14  44 ekalklgavksvvvDakeefvkdyifpaikanalYedrYllstalaRPliakklvevak 102
                 eka k+gavk+++ D ke+fv +y+++a+kana+Ye rYll+t+laRP+i+k+++e+a+
   MMETSP1325-20131115|227_1   2 EKAMKCGAVKVFIEDLKEDFVVNYVYEAVKANAIYESRYLLGTSLARPCITKRQIEIAQ 60 
                 79*******************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|226_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.2    7.9  16.0        2.3    7.9  11.1    1.1  1  PF01456.12 Mucin-like glycoprotein


Domain annotation for each model (and alignments):
>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  11.1   0.00016       2.3      41      87 ..       6      57 ..       1      81 [. 0.43

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00016
  PF01456.12 41 gqskltttttttkppttttttt.....tasttittkttkatttttttttttt 87
                g+ +++ +t+ t  +tt ttt+       +tt  t t ++++ t+++ t  t
   MMETSP1325-20131115|226_1  6 GRTDKQKSTVQTVKTTTNTTTQaaamaDEATTAATLTQHSSNVTSQKDTCNT 57
                4444444444444444444444122222222223333333333332222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1221  (0.0893066); expected 273.4 (0.02)
Passed bias filter:                      728  (0.0532475); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.44s 00:00:00.85 Elapsed: 00:00:00.73
# Mc/sec: 275.75
//
Query:       MMETSP1325-20131115|228_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.032   14.1   0.2      0.042   13.7   0.1    1.2  1  PF10078.4  Uncharacterized protein conserved in bacteria (DUF2316)
      0.035   13.8   0.3      0.045   13.4   0.2    1.1  1  PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
      0.047   13.0   2.5      0.058   12.7   1.7    1.1  1  PF06810.6  Phage minor structural protein GP20
      0.069   13.1   0.5      0.083   12.9   0.3    1.1  1  PF03646.10 FlaG protein
       0.12   11.8   4.4       0.11   11.9   0.5    1.9  2  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
       0.13   11.8   2.4       0.17   11.5   1.7    1.3  1  PF07926.7  TPR/MLP1/MLP2-like protein
       0.16   11.1   0.3       0.18   10.9   0.2    1.0  1  PF01738.13 Dienelactone hydrolase family
       0.38   10.6   3.9       0.47   10.3   2.7    1.2  1  PF02050.11 Flagellar FliJ protein


Domain annotation for each model (and alignments):
>> PF10078.4  Uncharacterized protein conserved in bacteria (DUF2316)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.5e-05     0.042       5      53 ..      27      75 ..      21      78 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.5e-05
  PF10078.4  5 keerkaTkkeLqanfelsglsveqvAkdLnvteekvekvlelkqrsied 53
               k ++ + ++e  + +++++  ve+ A+ L+   ++vek+le++ ++i+ 
  MMETSP1325-20131115|228_1 27 KRQKDKYRDEWVKRRRQCKEVVENLADGLEKKVKEVEKMLEIETDEIAG 75
               456667899*********************************9998875 PP

>> PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   2.6e-05     0.045      34      89 ..      17      74 ..      13      76 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.6e-05
  PF05852.6 34 alfkkQfektkkslrslek..lkkekelkekvssleteieekkkelelLkkfdrkkle 89
               al+ +Q++k k+   +++   +k+++++ke+v++l   +e+k ke+e++ +++  +++
  MMETSP1325-20131115|228_1 17 ALTPAQLTKKKRQKDKYRDewVKRRRQCKEVVENLADGLEKKVKEVEKMLEIETDEIA 74
               688899999888888776533899**************************99988875 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.7   3.4e-05     0.058       6      72 ..       7      71 ..       4      75 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.4e-05
  PF06810.6  6 kimaekgkdiqeeKskldkaeeeldslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkke 72
               k+ a+++++++ + ++l+k++ ++d+++ +  +r  q ++  ++    + L+kk++++++  + +++
  MMETSP1325-20131115|228_1  7 KVAALNNATVALTPAQLTKKKRQKDKYRDEWVKRRRQCKEVVEN--LADGLEKKVKEVEKMLEIETD 71
               7999999***99*****************************995..566899***999998875555 PP

>> PF03646.10  FlaG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   4.9e-05     0.083      15      64 ..      22      72 ..       6      77 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.9e-05
  PF03646.10 15 ssaaksskeeeaeeeaee....keeskeelekaveklneflqslntsleFsvde 64
                +  +k+ ++ +  +   e    + + ke +e+ ++ l++ ++++++ le++ de
   MMETSP1325-20131115|228_1 22 QLTKKKRQKDKYRD---EwvkrRRQCKEVVENLADGLEKKVKEVEKMLEIETDE 72
                22222222222222...2333467899999*********************998 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.5   6.4e-05      0.11     127     169 .]       3      45 ..       1      45 [. 0.93
   2 ?    2.3   0.2     0.056        96      21      40 ..      46      67 ..      43      73 .. 0.50

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.4e-05
  PF07106.8 127 eieekLeslkeankevtkeeiekvkkeykklkkewkkrkklcn 169
                + ++k+ +l++a+   t+++  k k++++k+  ew kr++ c+
  MMETSP1325-20131115|228_1   3 ALRAKVAALNNATVALTPAQLTKKKRQKDKYRDEWVKRRRQCK 45 
                5688999*********************************885 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.056
  PF07106.8 21 dvvdnlqkklgKta..vqkaLd 40
               +vv+nl  +l+K++  v k+L+
  MMETSP1325-20131115|228_1 46 EVVENLADGLEKKVkeVEKMLE 67
               4555555555554322444443 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.7   9.8e-05      0.17      59     110 ..      21      73 ..       1      75 [. 0.84

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 9.8e-05
  PF07926.7  59 qeLtklkkelaelqkeaselrkeadsakael.neleekweeeksmLevelsel 110
                 +Ltk k + +++++e  + r + ++  ++l + le+k +e ++mLe e +e+
  MMETSP1325-20131115|228_1  21 AQLTKKKRQKDKYRDEWVKRRRQCKEVVENLaDGLEKKVKEVEKMLEIETDEI 73 
                68999999999999999999999888766663679999*********999886 PP

>> PF01738.13  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00011      0.18      39     101 ..      12      74 ..       4      77 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00011
  PF01738.13  39 eeGyvalapdlYarqgldandtaeaasalrellkkr.eeavlddlkaainylkslpevstkkvg 101
                 +++ val+p  +++++ +++d+ +++++ r++  k+  e++ d l+++++ ++++ e +t++++
   MMETSP1325-20131115|228_1  12 NNATVALTPAQLTKKK-RQKDKYRDEWVKRRRQCKEvVENLADGLEKKVKEVEKMLEIETDEIA 74 
                 56679***********.77777777777777777766*****************9999888875 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.7   0.00028      0.47      66     119 ..      21      74 ..       5      76 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00028
  PF02050.11  66 qeleqaekqveqareewqeanqelkklekLeerekkkeqkeeakrEqkllDEla 119
                  +l++ ++q +++r+ew + +++ k +   ++   +k+ ke +k  + ++DE+a
   MMETSP1325-20131115|228_1  21 AQLTKKKRQKDKYRDEWVKRRRQCKEVVENLADGLEKKVKEVEKMLEIETDEIA 74 
                 68999***************9999888777777888888888888889999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1233  (0.0901843); expected 273.4 (0.02)
Passed bias filter:                      912  (0.0667057); expected 273.4 (0.02)
Passed Vit filter:                       100  (0.00731422); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.81
# Mc/sec: 245.55
//
Query:       MMETSP1325-20131115|225_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   15.0   0.6      0.023   14.2   0.4    1.4  1  PF01569.16 PAP2 superfamily


Domain annotation for each model (and alignments):
>> PF01569.16  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.4   1.7e-06     0.023      53     124 ..     228     312 ..     195     317 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.7e-06
                 ---TTT---HHHHHHHH--------............-B----HHHHHHHHH---TT-----TT-------.---HHHHHHHHHH CS
  PF01569.16  53 SgHaafafaaalllalllkrklgkr............vllallllilallvalsRvylgvHfpsDvlaGll.lgiliallvylll 124
                 Sg aa ++a al l+  + +k  ++            + +++lll++ +++  +R+y g  fp + ++ ++  g++ ++++y+++
   MMETSP1325-20131115|225_1 228 SGTAAGSAASALGLSGPWYKKAVFYekefkagpvpivRCISFLLLVMLMVILCTRIYSGFCFPGQMIITWInYGTCGLYIIYAIW 312
                 899999999999999999999998899*********88888888888899999****************6536777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.35s 00:00:01.04 Elapsed: 00:00:00.63
# Mc/sec: 1453.03
//
Query:       MMETSP1325-20131115|230_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0007   18.9   0.0    0.00088   18.5   0.0    1.1  1  PF00328.17 Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> PF00328.17  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   6.4e-08   0.00088     295     347 .]       8      72 ..       3      72 .. 0.92

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 6.4e-08
                 EE-HHHHHHHCCCCT--------............HHHHS-CT-EEEEEEEEET-SSEEEEEEEC CS
  PF00328.17 295 fthDshiytllnaLgleekiare............aspelpyasqivfelyedsekkfyvrllfs 347
                 f+h ++++++ ++Lg++  ++              +s   p+a++iv  ly ++  +++vr lf+
   MMETSP1325-20131115|230_1   8 FAHAETVLPFATMLGVFHAQDTMtaayrdenryfrSSVRAPFAANIVATLYACDSSEYMVRFLFN 72 
                 9***************996666699****************************6666*****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.31s 00:00:00.71 Elapsed: 00:00:00.68
# Mc/sec: 475.75
//
Query:       MMETSP1325-20131115|231_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-14   52.1   0.0    1.4e-13   50.9   0.0    1.6  2  PF01399.22 PCI domain


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.49   6.7e+03      17      31 ..      57      70 ..      52      91 .. 0.51
   2 !   50.9   0.0   9.9e-18   1.4e-13      43     105 .]     146     208 ..     100     208 .. 0.74

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 0.49
                XXXXXXXXX.....X CS
  PF01399.22 17 gfseelkdleeella 31
                g++++lk++  ++l 
   MMETSP1325-20131115|231_1 57 GWRHNLKSC-VTFLL 70
                566666666.33332 PP

  == domain 2    score: 50.9 bits;  conditional E-value: 9.9e-18
                 -HHHHHHHHHHHHHS-SEE-TTT----SSS-HHHHHHHHHHHHH-------B-S----EE--- CS
  PF01399.22  43 ekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIadgelrakidqpsgivvfkk 105
                 + ++++++lr  +k+y++i+ +rl +ll+ls+devE  +++l+  g l akid+p giv+f+k
   MMETSP1325-20131115|231_1 146 HTRTTQHNLRVAAKYYKRIRTARLGELLGLSTDEVEDHISTLVGGGDLFAKIDRPAGIVSFQK 208
                 5799********************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.82
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|229_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-20   70.9   0.0    9.5e-20   70.5   0.0    1.1  1  PF00650.15 CRAL/TRIO domain
    5.9e-09   35.8   0.0    8.7e-09   35.3   0.0    1.1  1  PF13716.1  Divergent CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   0.0   1.4e-23   9.5e-20       5     158 ..     138     286 ..     134     287 .. 0.90

  Alignments for each domain:
  == domain 1    score: 70.5 bits;  conditional E-value: 1.4e-23
  PF00650.15   5 eggkvgihgrDkngrpvlylrlgrfdpkklseeelvrllllvlerllklleedgqiegvtvviDmkglslskmlwkpisllkkilkilqdnyPerlkkilivnaPklfkvafklvkpfldektreKikfvspsntpatlekyidpeqlpkelGG 158
                 +g +  ++grD+ gr ++y++++  dp+ +  e + +  ++++  +    +   q  gv++v+D++g++l  +++ +++ l++ + +++++yP r+++ +iv+a+  + + +k + +++ ++tr K++fvs+  + ++l++ idp+ lp e+GG
   MMETSP1325-20131115|229_1 138 TGMASLLPGRDRFGRAMIYVKPRFLDPALCPVEYFQQSACYCIQEAN-RDPV-VQSKGVVIVVDTSGTGLMTLGNYTYEDLRRGA-LMFNCYPSRVRHTYIVHASGTMYASVKAILAMMRPVTRAKVTFVSE--DLSELHEAIDPKLLPPEMGG 286
                 5677789*********************9997777787888877755.6666.8***************99999999****9876.9*******************************************55..4589***************9 PP

>> PF13716.1  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.3e-12   8.7e-09       6     148 ..     144     292 ..     141     292 .. 0.81

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 1.3e-12
  PF13716.1   6 tggrdregrpvlvfiakyl....pstddydkllkyllhtlede.ivgkp.yvlVyfhtglssenkpslswlkklyktlprr......ykknlkkvylvhps....tflksilstllslfvskkflrkkviyi.sslseLseyiditqlkkslpgvysyde 148
                  grdr gr  +++ +++l     + + ++    y++++     +v+++  v+V++ +g++        ++  +y+ l+r       y+ ++ ++y+vh+s    + +k il  +++++++ k+     +++ + lseL+e id++ l+ +++gv  yde
  MMETSP1325-20131115|229_1 144 LPGRDRFGRAMIYVKPRFLdpalCPVEYFQQSACYCIQEANRDpVVQSKgVVIVVDTSGTGL-----MTLGNYTYEDLRRGalmfncYPSRVRHTYIVHASgtmyASVKAIL-AMMRPVTRAKV-----TFVsEDLSELHEAIDPKLLPPEMGGVDGYDE 292
                579****************9887556688888888888886665555558*********854.....455666677777777777779**************9999999999.77788855555.....555168******************9988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.42s 00:00:01.00 Elapsed: 00:00:00.64
# Mc/sec: 1370.42
//
Query:       MMETSP1325-20131115|233_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.8   2.3      0.019   14.8   1.6    1.6  2  PF13945.1  Splicing factor, salt tolerance regulator
       0.24   10.0   9.8       0.32    9.7   6.8    1.1  1  PF01698.11 Floricaula / Leafy protein
        2.4    7.1   7.6        2.9    6.8   5.3    1.1  1  PF13203.1  Putative metallopeptidase domain
        2.7    6.9  12.9       0.17   10.9   5.5    1.5  2  PF04641.7  Replication termination factor 2
        7.2    6.8   8.8        4.3    7.6   0.0    2.4  2  PF12220.3  U1 small nuclear ribonucleoprotein of 70kDa MW N terminal


Domain annotation for each model (and alignments):
>> PF13945.1  Splicing factor, salt tolerance regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1       3.8     1e+04      39      44 ..     125     130 ..     115     144 .. 0.50
   2 ?   14.8   1.6     7e-06     0.019      19      55 ..     174     210 ..     161     248 .. 0.57

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 3.8
  PF13945.1  39 kkskat 44 
                kk+kat
  MMETSP1325-20131115|233_1 125 KKKKAT 130
                222222 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 7e-06
  PF13945.1  19 elntvaesdsssskkkkkkkkkskatseslnasddst 55 
                 l+ +ae+++ +skkkkkkkkk+k+  +  + ++  +
  MMETSP1325-20131115|233_1 174 ALQGKAEQEEGGSKKKKKKKKKKKKADDEEEKEGGAN 210
                4455566666666666666666655444443333332 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   6.8   0.00012      0.32     148     223 ..     145     219 ..     112     240 .. 0.45

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00012
  PF01698.11 148 glseepvqe.ekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsged 223
                  + e+ + +  +e+ag g++g+g  e+ +a + k e+e+   +kkk+k+kkkk+  ++++e++e   +edeeg ge+
   MMETSP1325-20131115|233_1 145 PTIEDGEGKrVEEEAGDGDGGEGVEEKEGALQGKAEQEEGGSKKKKKKKKKKKK--ADDEEEKEGGANEDEEGRGET 219
                 233333333233455555555555555544443333333333222222222222..333334443344444443332 PP

>> PF13203.1  Putative metallopeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.3    0.0011       2.9     131     207 ..     138     214 ..     100     246 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0011
  PF13203.1 131 aEklYralddkk.....kkrsdkqsdsstdggdgsgesegqgeqdskknrkdapekakvralakgesadlae.spegksapea 207
                 E l       +     ++++++ +++ +dg  g+g +e++g  ++k +++++  k+k+ +++k+++ad +e ++ g++++e+
  MMETSP1325-20131115|233_1 138 DESLT------DmptieDGEGKRVEEEAGDGDGGEGVEEKEGALQGKAEQEEGGSKKKKKKKKKKKKADDEEeKEGGANEDEE 214
                33332......133344667777777777777777777777777777777777444444444444444433303333333332 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1         2   5.5e+03      22      25 ..     128     131 ..     116     153 .. 0.53
   2 ?   10.9   5.5   6.4e-05      0.17     172     254 ..     169     246 ..     165     251 .. 0.49

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 2
  PF04641.7  22 ekvd 25 
                + +d
  MMETSP1325-20131115|233_1 128 KATD 131
                1111 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 6.4e-05
  PF04641.7 172 keelellkarleeekakkkkkkkkkkkkkaeakgekaeaeaksksskeesskagkkkekkklkkkkslaekneksevykslft 254
                +e + +l+ ++e+e+  +kkkkkkkkkkk+++++e++e  a++      ++  g++  ++  + ++ + + ++k+  + s+f 
  MMETSP1325-20131115|233_1 169 EEKEGALQGKAEQEEGGSKKKKKKKKKKKKADDEEEKEGGANED-----EEGRGETAGSHGAAVESPQPAPPKKKGLFPSIFR 246
                45555666666666666666666555555544444433333222.....2333344444444444444445555556666665 PP

>> PF12220.3  U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0016       4.3      13      29 ..     103     119 ..      94     136 .. 0.86
   2 ?   -0.5   4.2      0.52   1.4e+03      62      77 ..     187     202 ..     167     213 .. 0.51

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0016
  PF12220.3  13 FapRpplrylppldkap 29 
                 ap+ppl+y pp+++++
  MMETSP1325-20131115|233_1 103 NAPKPPLEYTPPVKEKK 119
                48**********98765 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.52
  PF12220.3  62 keekkerekkekkekn 77 
                k++kk+++kk+k   +
  MMETSP1325-20131115|233_1 187 KKKKKKKKKKKKADDE 202
                2222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1208  (0.0883558); expected 273.4 (0.02)
Passed bias filter:                      620  (0.0453482); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.43s 00:00:01.21 Elapsed: 00:00:00.82
# Mc/sec: 748.13
//
Query:       MMETSP1325-20131115|232_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-39  133.8   5.9    7.2e-39  133.2   4.1    1.3  1  PF00106.20 short chain dehydrogenase
    7.7e-22   78.1   1.2    7.7e-22   78.1   0.8    1.4  2  PF13561.1  Enoyl-(Acyl carrier protein) reductase
    9.5e-20   70.9   2.3    1.7e-19   70.0   1.6    1.4  1  PF08659.5  KR domain
     0.0015   18.1   2.5     0.0031   17.1   1.3    1.9  1  PF12242.3  NAD(P)H binding domain of trans-2-enoyl-CoA reductase
     0.0066   15.7   1.1      0.013   14.7   0.8    1.7  1  PF01370.16 NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.016   15.0   1.3      0.047   13.5   0.9    1.8  1  PF13460.1  NADH(P)-binding


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   4.1   3.2e-42   7.2e-39       1     166 [.      46     213 ..      46     214 .. 0.97

  Alignments for each domain:
  == domain 1    score: 133.2 bits;  conditional E-value: 3.2e-42
                 -EEEE---------HHHHHHHHHSSEEEEEEESS.SHHHHHHHHHHHHH---EEEEEE--TTSHHHHHHHHHHHHHH----SEEEEE---TT-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH....HH---EEEEEECHHHHSSTT.HHHHHHHCHHHCCHHHHHHHH CS
  PF00106.20   1 gtvliTGGlgglGlalArwLveegarhlvlvsrredapgaaeliaelealgaevtvvacDvadrdalaallaeirkalgpldgvvhnagvlddgpleeltperlervlapkvtgawllheltld....adlgafvlfSSvagvlgspgqaaYaaakaaldalaesrraeg 166
                 +t+++TG+++g+G+a+A +L+ +g++++v ++ +  a +a+e+++e+e  g ++ +v+++++++++++a+++++ +++g +d++v+nag+++d+++ ++++ ++++v+++++ g++l+++++ +    a+ g++++++Sv g +g+pgqa+Yaaak ++ +++++ ++e+
   MMETSP1325-20131115|232_1  46 KTAIVTGASRGIGKAVALELAGQGCNVVVNYAGS--AGAAEEVVKEIEGMGCKAIAVQANIGEEADVDAMFKAATEEFGGVDILVNNAGITRDTLVMRMKKGQFDEVINTNLGGVFLCTKAAFKvmakARAGRIINIASVVGQIGNPGQANYAAAKGGVLGMTKANAKEF 213
                 79******************************99..****************************************************************************************997667**********************************998875 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       1.9   4.4e+03     216     229 ..      16      29 ..      15      39 .. 0.79
   2 !   78.1   0.8   3.4e-25   7.7e-22       5     242 ..      54     287 ..      52     288 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 1.9
                ---HHHHHCSGGGT CS
  PF13561.1 216 vaeaaafLlsdlas 229
                va +aafL ++las
  MMETSP1325-20131115|232_1  16 VAPTAAFLGTPLAS 29 
                67888888888876 PP

  == domain 2    score: 78.1 bits;  conditional E-value: 3.4e-25
                ------HHHHHHHH---EEEE---HH------------------..----TT-SGGHHHHHHHHHHH.---BSEEEEEEE---T..TTS-GGG------HHHHHHHTHHHHHHHHHHGG..GB-----EEEEEE-------------------THHHHHHHHHH----S---EEEEEE--------------------------------CCC---HHHHHCSG.GGTT----EEE----- CS
  PF13561.1   5 dnsigwaiakalaeaGaevilttwvpaklkkkvqelakelpadv..vplDvtseedvselaekvkedlggkiDilvhsianspeervekplletsrkgllaalsisayslvsllkaalpknlmneggSivalsylaservipgyggmsvaKAaLEsltRvlAvelgrkkgiRvntisaGplktraakaiggiekmieyseenapLgkelsaeevaeaaafLlsd.lasaiTgetlyvDgGl 242
                +++ig a+a  la +G++v++ ++  a  +++v +  + ++ ++  v++++ +e+dv+ ++++++e++ g +Dilv+ ++++ +      ++ +++ ++++ ++++   +   +kaa + ++ +  g i+ +  +  +   pg+ ++++aK  +   t+  A+e++  +g+ vn++  G +++  ++ ++  + m e+ +++ pL +  +++eva  + fL++d +a   Tg+   vDgG+
  MMETSP1325-20131115|232_1  54 SRGIGKAVALELAGQGCNVVVNYAGSAGAAEEVVKEIEGMGCKAiaVQANIGEEADVDAMFKAATEEF-GGVDILVNNAGITRD----TLVMRMKKGQFDEVINTNLGGVFLCTKAAFKVMAKARAGRIINIASVVGQIGNPGQANYAAAKGGVLGMTKANAKEFAA-RGVTVNAVCPGFIESDMTNELM-EGPMGEQIKAQIPLARLGKTSEVAGLVRFLATDdAAAYCTGHEFNVDGGI 287
                48***********************9987777766666777774369********************9.**************9....558889*************************88888889**********999**************************9.**************99999998.57799***********88************99725566899********6 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   1.6   7.7e-23   1.7e-19       2     154 ..      47     200 ..      47     230 .. 0.89

  Alignments for each domain:
  == domain 1    score: 70.0 bits;  conditional E-value: 7.7e-23
                -EEE----SHHHHHHHHHHHH-----EEEEE--.---------HHHHHH----EEEEE--TTSHHHHHHHH----TTS.---EEEE---------TTT--HHHHHHHHHHHHHHHHHHHHHHCC....----EEEEEEEGGGT-------------H CS
  PF08659.5   2 tyLvtGGlgglGlelarwLaergarhlvllsrsaapdeeaeallaelealgaevtvvaaDvadrdavealleeveaeepplrGvvhaAgvlrdallaemtaedlaavlapKvtGawnLhellad....epldffvlfSSiagvlgsagqanyaaana 154
                t +vtG+  g+G+++a +La +g + +v  + s   + +ae+ ++e+e +g++  +v+a++ ++++v a+++++++e++ ++  v+ Ag++rd+l+ +m++ ++++v+++ + G+    ++  +     +   ++ ++S+ g +g++gqanyaaa+ 
  MMETSP1325-20131115|232_1  47 TAIVTGASRGIGKAVALELAGQGCNVVVNYAGS---AGAAEEVVKEIEGMGCKAIAVQANIGEEADVDAMFKAATEEFGGVDILVNNAGITRDTLVMRMKKGQFDEVINTNLGGVFLCTKAAFKvmakARAGRIINIASVVGQIGNPGQANYAAAKG 200
                569*********************999999888...44455589**********************************************************************9888776544454499999**********************85 PP

>> PF12242.3  NAD(P)H binding domain of trans-2-enoyl-CoA reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   1.3   1.4e-06    0.0031      26      67 ..      31      72 ..      23      82 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.4e-06
  PF12242.3 26 qiayvkaqgkidG.pkkvLviGaSsGyGlAsrialafgagadt 67
                +a++ka+ +++G +k++ v+GaS G+G A +++la g g ++
  MMETSP1325-20131115|232_1 31 RVAAAKASLTMEGdAKTAIVTGASRGIGKAVALELA-GQGCNV 72
               57788888888776899*************999998.666654 PP

>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.8   5.8e-06     0.013       2      76 ..      49     134 ..      48     223 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 5.8e-06
                 EEE--------HHHHHHHHH-TEEE.EESSCSTCCCCCCHHH.....TBEEEB--TT-HHHHHHHHHHH.....T.SEEEE--S-- CS
  PF01370.16   2 lVtGatGfiGsalveallekgyevv.nlirrtrseslatvri.....rvelveldltdkdalerlfaee.....qpdaVihlAaes 76 
                 +VtGa+  iG+a++ +l+ +g +vv n++++  ++++  ++i     ++  v++++ ++++++++f+ +      +d  ++ A+ +
   MMETSP1325-20131115|232_1  49 IVTGASRGIGKAVALELAGQGCNVVvNYAGSAGAAEEVVKEIegmgcKAIAVQANIGEEADVDAMFKAAteefgGVDILVNNAGIT 134
                 8**********************776777777777666666566666666666666666666666666555555555555555544 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.9   2.1e-05     0.047       3     149 ..      50     231 ..      49     276 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.1e-05
  PF13460.1   3 viGAtGktGrrivkellarghevtalvRnpsklpe.........ssgvtivkkDlfdledlaeala.......gvdvvvdafgarpe...........d..........regvkhlldalkaagvrrlvvvsaaglyrdkpglfelldkplf.keylrakaaaeelleasgldwtivrPaalfea 149
                v+GA+  +G++++ el+ +g +v++       ++e           ++ +v+ ++ +++d++++++       gvd++v ++g +++           d             +k+ ++++++a + r++ + ++  +  +pg     +  +  + +l + +a  + ++a+g+ + +v+P+ +  +
  MMETSP1325-20131115|232_1  50 VTGASRGIGKAVALELAGQGCNVVVNYAGSAGAAEevvkeiegmGCKAIAVQANIGEEADVDAMFKaateefgGVDILVNNAGITRDtlvmrmkkgqfDevintnlggvFLCTKAAFKVMAKARAGRIINIASVVGQIGNPGQ---ANYAAAkGGVLGMTKANAKEFAARGVTVNAVCPGFIESD 231
                9*******************9999877766655555776676443455678888899999998888777777789*******98888788777766662677677777555699***************66444434444552...222333256666666778999999999999999876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.85
# Mc/sec: 820.40
//
Query:       MMETSP1325-20131115|236_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.61
# Mc/sec: 581.41
//
Query:       MMETSP1325-20131115|238_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.66
# Mc/sec: 250.53
//
Query:       MMETSP1325-20131115|237_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.95
# Mc/sec: 703.77
//
Query:       MMETSP1325-20131115|241_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-15   56.1   0.0    2.5e-15   56.0   0.0    1.0  1  PF03133.10 Tubulin-tyrosine ligase family
     0.0009   18.0   0.0    0.00097   17.8   0.0    1.1  1  PF14398.1  YheC/D like ATP-grasp


Domain annotation for each model (and alignments):
>> PF03133.10  Tubulin-tyrosine ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   3.7e-19   2.5e-15     224     289 ..       6      73 ..       2      77 .. 0.84

  Alignments for each domain:
  == domain 1    score: 56.0 bits;  conditional E-value: 3.7e-19
  PF03133.10 224 easrlnvqrlkncf..elyGvDilidenlkpwLlEvNasPdlksttkldaelkeeliddvlnvvvppd 289
                 e++ l+v+++ ++f   + G+D+lid++lkpwL+EvNasP+l+++t+ d+ +k+ li+dv ++v p d
   MMETSP1325-20131115|241_1   6 EPCLLHVAPNTSNFtrSVDGYDLLIDDDLKPWLVEVNASPSLSASTQSDRIMKQSLIRDVYRIVCPQD 73 
                 5666667776666622467******************************************9877765 PP

>> PF14398.1  YheC/D like ATP-grasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.4e-07   0.00097     213     252 ..      25      63 ..      12      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.4e-07
  PF14398.1 213 GlDlglDkegriWllEvNskPgkksfkeakdeeareqsle 252
                G Dl +D++ ++Wl EvN+ P+ +  ++ +d+ +++++++
  MMETSP1325-20131115|241_1  25 GYDLLIDDDLKPWLVEVNASPSLSASTQ-SDRIMKQSLIR 63 
                789*******************999999.45556655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.67
# Mc/sec: 289.71
//
Query:       MMETSP1325-20131115|242_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.17   11.3   0.7       0.28   10.6   0.5    1.4  1  PF00558.14 Vpu protein


Domain annotation for each model (and alignments):
>> PF00558.14  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.5   2.1e-05      0.28      33      66 ..      38      70 ..      31      79 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 2.1e-05
  PF00558.14 33 ikkqkeierlikrireraedSgnESdGeeeeela 66
                 + ++ei +   r+r   +  ++ESdGe +e l+
   MMETSP1325-20131115|242_1 38 EQAEEEIRKGSTRVRLDDNYGDDESDGEVDE-LE 70
                55679***********************999.65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.43s 00:00:00.77 Elapsed: 00:00:00.71
# Mc/sec: 330.76
//
Query:       MMETSP1325-20131115|243_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-08   31.9   0.0    9.8e-08   31.7   0.0    1.1  1  PF01221.13 Dynein light chain type 1


Domain annotation for each model (and alignments):
>> PF01221.13  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.0   7.1e-12   9.8e-08       8      50 ..      17      63 ..      11      64 .] 0.84

  Alignments for each domain:
  == domain 1    score: 31.7 bits;  conditional E-value: 7.1e-12
                EEETTS-HHHHHHHHHHHHHHHHH-S....SHHHHHHHHHHHHHHHH CS
  PF01221.13  8 vkaadmseemqeeaielaaealekfe....eekeiAkhiKkefDkky 50
                   +dm+++m ++a+e+++++++++     +  +iA+++KkefD+++
   MMETSP1325-20131115|243_1 17 KMPVDMPDDMLKDALETCSRVIDQYPdfenDGLKIAETVKKEFDERW 63
                5679*******************88754445577**********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.18s 00:00:00.52 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|240_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       584  (0.042715); expected 273.4 (0.02)
Passed bias filter:                      442  (0.0323288); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.59
# Mc/sec: 974.79
//
Query:       MMETSP1325-20131115|235_1  [L=468]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.3   0.2      0.026   14.5   0.1    1.3  1  PF08702.5 Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   1.9e-06     0.026     103     136 ..      52      85 ..      48      89 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.9e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS CS
  PF08702.5 103 esqirvLqevlrsneskiqrLeqdiaqkertCke 136
                e+ i  Lq+ +++ ++ + +L+qd+a++ ++C++
  MMETSP1325-20131115|235_1  52 EADIAKLQSEVADLNKAVLQLKQDMATLSKQCQQ 85 
                5789****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       594  (0.0434465); expected 273.4 (0.02)
Passed bias filter:                      490  (0.0358397); expected 273.4 (0.02)
Passed Vit filter:                        96  (0.00702165); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.89u 0.36s 00:00:01.25 Elapsed: 00:00:00.83
# Mc/sec: 1351.20
//
Query:       MMETSP1325-20131115|244_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 158.33
//
Query:       MMETSP1325-20131115|246_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.81
# Mc/sec: 186.38
//
Query:       MMETSP1325-20131115|247_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0037   17.2   0.2     0.0077   16.2   0.1    1.5  1  PF00280.13 Potato inhibitor I family


Domain annotation for each model (and alignments):
>> PF00280.13  Potato inhibitor I family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   5.6e-07    0.0077       1      32 [.      72     104 ..      72     109 .. 0.91

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 5.6e-07
                 --B-GGG---BHHHHHHHHHHH-TTSEEE.EEE CS
  PF00280.13   1 KtsWPElvGvkgeeAkeiIekenpdvtvv.vlp 32 
                 K+ WPE  G  gee +e I+ e+pd++ v vl+
   MMETSP1325-20131115|247_1  72 KRIWPEHKGGVGEEVAEAIKAERPDLKKVqVLK 104
                 677************************997876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.65
# Mc/sec: 741.03
//
Query:       MMETSP1325-20131115|248_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-17   61.6   0.1      6e-17   61.0   0.1    1.3  1  PF02617.12 ATP-dependent Clp protease adaptor protein ClpS


Domain annotation for each model (and alignments):
>> PF02617.12  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   0.1   4.4e-21     6e-17       7      81 ..     119     188 ..     113     189 .. 0.95

  Alignments for each domain:
  == domain 1    score: 61.0 bits;  conditional E-value: 4.4e-21
  PF02617.12   7 ykViLlNDdvhtmefVievLqkvf.gmteeqAeqimlevhreGravvgvgtleeaetkveqvqrkgrekgsPLsat 81 
                 ++V+L+ND++ht+e+V+e++ kv+ ++t+++A qi+ + h+ G+a+v++ +++ ae+ +  +q++g      L+++
   MMETSP1325-20131115|248_1 119 WRVLLHNDEIHTFEYVTESIVKVCpQLTKKKAFQITRTTHTAGVATVTTVWKQLAEQMCLGLQTYG------LTVS 188
                 9****************************************************************9......8776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       530  (0.0387654); expected 273.4 (0.02)
Passed bias filter:                      435  (0.0318169); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.40s 00:00:00.92 Elapsed: 00:00:00.73
# Mc/sec: 672.95
//
Query:       MMETSP1325-20131115|249_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.74
# Mc/sec: 845.20
//
Query:       MMETSP1325-20131115|250_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-10   41.3   0.6    4.6e-10   39.2   0.3    2.0  2  PF12352.3  Snare region anchored in the vesicle membrane C-terminus
    1.2e-08   34.9   4.1    1.2e-08   34.8   1.1    2.0  2  PF05008.10 Vesicle transport v-SNARE protein N-terminus
    0.00031   20.2   0.3     0.0019   17.7   0.0    2.0  2  PF03908.8  Sec20
  ------ inclusion threshold ------
      0.013   13.6   0.3      0.013   13.6   0.2    1.7  2  PF06160.7  Septation ring formation regulator, EzrA
      0.015   15.1   1.2      0.022   14.5   0.9    1.2  1  PF04043.10 Plant invertase/pectin methylesterase inhibitor
      0.029   13.8   1.5      0.079   12.4   1.1    1.8  1  PF00957.16 Synaptobrevin
      0.043   13.7   0.2      0.043   13.7   0.1    1.5  2  PF07798.6  Protein of unknown function (DUF1640)
       0.23    8.8   1.2       0.29    8.5   0.2    1.5  2  PF05478.6  Prominin
       0.68    8.8   6.4      0.096   11.6   1.7    1.5  2  PF00261.15 Tropomyosin
        1.3    8.7   4.7        0.6    9.8   1.0    2.0  3  PF13422.1  Domain of unknown function (DUF4110)


Domain annotation for each model (and alignments):
>> PF12352.3  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.5     2e+03      43      47 ..      48      52 ..      35      63 .. 0.51
   2 !   39.2   0.3   3.4e-13   4.6e-10       6      65 ..     138     197 ..     135     198 .. 0.94

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.5
  PF12352.3 43 sklhn 47
               +++  
  MMETSP1325-20131115|250_1 48 RRMEA 52
               34444 PP

  == domain 2    score: 39.2 bits;  conditional E-value: 3.4e-13
  PF12352.3   6 esdrlknShrivdetisiGaailedLhsQretLkrarsklhnvanrlgksnsiLrsikrR 65 
                 ++ l++S+ri+ et++iG ++++d+  Qr +L + ++k++++   +  ++++L+++  R
  MMETSP1325-20131115|250_1 138 GTELLEESRRIIGETEEIGDQVMGDMENQRHQLLSEHEKVLETRGFISDARQTLSTMGWR 197
                56779***************************************************9655 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   1.1   8.8e-12   1.2e-08       7      79 .]      14      85 ..       8      85 .. 0.95
   2 ?    0.0   0.0      0.63   8.6e+02      19      35 ..     163     179 ..     146     181 .. 0.76

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 8.8e-12
  PF05008.10  7 eikrklaslsklsgeerkaalreiekkldeaeellkqMelEvrnlpsserakykaklreykselkklkkelkr 79
                 i+r ++ ++k+++ +r+ a   +e+++ eae  l++Me  +++l  ser++  + +  +k++ ++lk+el+r
   MMETSP1325-20131115|250_1 14 AINRSIDAIRKNPA-SRNDAATAAEARFGEAERHLRRMEAALQTLEGSERTSREQAVSRCKQDFQSLKTELNR 85
                699********987.9*****************************99***********************975 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 0.63
  PF05008.10  19 sgeerkaalreiekkld 35 
                    +r+++l+e ek l+
   MMETSP1325-20131115|250_1 163 MENQRHQLLSEHEKVLE 179
                 345999***99999886 PP

>> PF03908.8  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.39   5.4e+02      21      70 ..      15      65 ..       8      86 .. 0.69
   2 !   17.7   0.0   1.4e-06    0.0019       7      89 ..     139     221 ..     136     224 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.39
  PF03908.8 21 vqqSeenleeldastksl.ekleeeykqvedvlsrskklvkklerrdktdk 70
               +++S  ++ +  as ++  +++e  + + e  l+r +  +++le +++t +
  MMETSP1325-20131115|250_1 15 INRSIDAIRKNPASRNDAaTAAEARFGEAERHLRRMEAALQTLEGSERTSR 65
               556666666555555554134555677777788888888888877777766 PP

  == domain 2    score: 17.7 bits;  conditional E-value: 1.4e-06
  PF03908.8   7 TeslraisqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglflacvvyvvk 89 
                Te l ++++++ ++ +  ++ + +++++ ++l + +e+  ++++ +s +++ ++++  r+++ k +++  + ++ + +  v++
  MMETSP1325-20131115|250_1 139 TELLEESRRIIGETEEIGDQVMGDMENQRHQLLSEHEKVLETRGFISDARQTLSTMGWRELQHKAMLVAIIIILFVSICLVLW 221
                889999*********************************************************98776655544444444554 PP

>> PF06160.7  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   9.4e-06     0.013     100     153 ..      30      84 ..      14      89 .. 0.88
   2 ?   -5.8   2.5       6.9   9.4e+03       2      20 ..     205     223 ..     204     227 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 9.4e-06
  PF06160.7 100 kkelkeieelldeieedieeireeleeLkeseeknrk.eveelkekYeelrktll 153
                +++ + +e+   e+e ++++++++l++L+ se+++r+ +v+ +k+++++l+ +l+
  MMETSP1325-20131115|250_1  30 NDAATAAEARFGEAERHLRRMEAALQTLEGSERTSREqAVSRCKQDFQSLKTELN 84 
                56778899999**********************9986269***********9996 PP

  == domain 2    score: -5.8 bits;  conditional E-value: 6.9
  PF06160.7   2 iigiivivivlylvvlllr 20 
                +++ii+i+ v +  vl++r
  MMETSP1325-20131115|250_1 205 LVAIIIILFVSICLVLWFR 223
                6788888888888887777 PP

>> PF04043.10  Plant invertase/pectin methylesterase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.9   1.6e-05     0.022      28      96 ..      25      90 ..       9     100 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.6e-05
                H..HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--.--THHHHHHHHHHHHHHHHH---HHHHHHHH CS
  PF04043.10 28 dssssaadprglaraavkaalanassaaarlsslskraakdprakaaledClelyddavddLsralaal 96
                +  +s +d+++ a+a +  a ++++ + a l++l  + ++++r+ +a++ C++ +++   +L+ral + 
   MMETSP1325-20131115|250_1 25 N-PASRNDAATAAEARFGEAERHLRRMEAALQTLEGS-ERTSRE-QAVSRCKQDFQSLKTELNRALNDA 90
                3.456689999***********************887.665655.9*******************9876 PP

>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.1   5.8e-05     0.079      47      86 ..     180     219 ..     147     221 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.8e-05
  PF00957.16  47 aqqFkkqarklkrkmwwknmklliililvvlililiiiiv 86 
                 +++F + ar+    m w++++ +++l+++++il++ i +v
   MMETSP1325-20131115|250_1 180 TRGFISDARQTLSTMGWRELQHKAMLVAIIIILFVSICLV 219
                 678999***************************9999876 PP

>> PF07798.6  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   3.1e-05     0.043      30     103 ..      13      90 ..       9      96 .. 0.89
   2 ?   -3.5   0.1       6.1   8.3e+03      84     103 ..     158     177 ..     151     179 .. 0.64

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 3.1e-05
  PF07798.6  30 evlndslevvakdlvtkeeqek....seyqqksdlaklkselvsleksefsnlqaeneklksdleklknkLrdeinkv 103
                +++n s++ + k+ +++++          + +++l ++   l++le se + +++   + k+d + lk++L+  +n++
  MMETSP1325-20131115|250_1  13 RAINRSIDAIRKNPASRNDAATaaeaRFGEAERHLRRMEAALQTLEGSERTSREQAVSRCKQDFQSLKTELNRALNDA 90 
                78999***********999888555455689****************************************9998876 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 6.1
  PF07798.6  84 klksdleklknkLrdeinkv 103
                +++ d+e+ +++L  e +kv
  MMETSP1325-20131115|250_1 158 QVMGDMENQRHQLLSEHEKV 177
                45556666666666666654 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2   0.00021      0.29     244     290 ..      42      89 ..      20      96 .. 0.85
   2 ?   -2.0   0.0      0.31   4.3e+02     412     412 ..     198     198 ..     141     220 .. 0.45

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00021
  PF05478.6 244 elgqvlkemkeaLesvsktvkelkeeg.sqlesglssvrrrlnellak 290
                e    l+ m++aL++++ ++++ +e++ s++++ ++s++++ln +l++
  MMETSP1325-20131115|250_1  42 EAERHLRRMEAALQTLEGSERTSREQAvSRCKQDFQSLKTELNRALND 89 
                44458999*************99987659******************9 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.31
  PF05478.6 412 t 412
                +
  MMETSP1325-20131115|250_1 198 E 198
                2 PP

>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.7     7e-05     0.096     134     196 ..      31      94 ..       8      97 .. 0.84
   2 ?   -2.7   0.1       1.6   2.2e+03      97     100 ..     163     166 ..     141     190 .. 0.53

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7e-05
  PF00261.15 134 eraeaaeskiaeLeeelkvvgnnlksLevseekaser.edkyeekiklLtekLkeaetRaeeAE 196
                 + a aae++  e e +l+ +++ l++Le se  + e+     ++  ++L+++L  a + a++AE
   MMETSP1325-20131115|250_1  31 DAATAAEARFGEAERHLRRMEAALQTLEGSERTSREQaVSRCKQDFQSLKTELNRALNDADNAE 94 
                 5678999999******************999988765156789999999999999999999999 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 1.6
  PF00261.15  97 lekq 100
                 +e+q
   MMETSP1325-20131115|250_1 163 MENQ 166
                 3322 PP

>> PF13422.1  Domain of unknown function (DUF4110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.0   0.00044       0.6      43      87 ..      25      69 ..       8      78 .. 0.82
   2 ?    4.2   0.1     0.025        34      31      68 ..      51      86 ..      50      96 .. 0.79
   3 ?   -2.4   0.0       2.8   3.8e+03      82      82 ..     166     166 ..     142     188 .. 0.52

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00044
  PF13422.1 43 gKelkkdafdlAeerykelkeileeleeleeeqkgeeeevsetke 87
               +   + da   Ae+r+ e+   l+++e   +  +g e+ ++e+  
  MMETSP1325-20131115|250_1 25 NPASRNDAATAAEARFGEAERHLRRMEAALQTLEGSERTSREQAV 69
               5567999*************************9999999988765 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.025
  PF13422.1 31 eaaiestqdaksgKelkkdafdlAeerykelkeileel 68
               eaa+++ +   s++  + +a + +++ ++ lk +l++ 
  MMETSP1325-20131115|250_1 51 EAALQTLE--GSERTSREQAVSRCKQDFQSLKTELNRA 86
               56667777..57999******************99875 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 2.8
  PF13422.1  82 v 82 
                +
  MMETSP1325-20131115|250_1 166 Q 166
                2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1096  (0.0801638); expected 273.4 (0.02)
Passed bias filter:                      860  (0.0629023); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.68u 0.42s 00:00:01.10 Elapsed: 00:00:00.86
# Mc/sec: 643.67
//
Query:       MMETSP1325-20131115|245_1  [L=686]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-88  295.4   0.0    5.2e-88  295.1   0.0    1.1  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.1   0.0   3.8e-92   5.2e-88       2     314 ..     163     457 ..     162     459 .. 0.95

  Alignments for each domain:
  == domain 1    score: 295.1 bits;  conditional E-value: 3.8e-92
                 HHHHHHT-TT---EESSTT---EEE-TT-......----TTHHHHHHH-------TTT--------B-HHHHHHHT.T----CCHHHTT-HHHHHHHHHHH..HS--GG...GT-BSEE.EEE----EEEEES-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--.-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT.---- CS
  PF00632.20   2 llskellnpklglfyvyessgllypnkplsrdsdleessndnlklfkflGkligkaiyegilldlpfsraflkflllgkkvtledleeidpelanslkellelessteavedlaltFtieedkkedeielvelipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrksededrLPtasTCfnyLkLpdYsskeilkekLltAieegqegFe 314
                 ++++ell+p + +f+++e+++ l +n+++ +              f+++G lig aiy++i+ld+pf+ +++k+l  gk  tledl e +p l ++lk +++++ ++e+   ++  F ++  +  ++i++++l+++G +ipVtn+n+++Yi++yv+++l+ sv+kq+eaf+kGf+ v+   a++lft+eelell+cG+++ +d+e l+++t+yd g++++sp i+ +we+++ fs+ee+rl+LkF TGs+r P++G+++l   f i+++ +d +rLPt++TCfn+L LpdY +keil++kL+tAi+++ egF 
   MMETSP1325-20131115|245_1 163 VVTRELLDPAYAMFKSDEETNQLFFNPHTFEI----------GLEFELIGLLIGVAIYNSIILDFPFPMVIYKQLK-GKTPTLEDLIEAQPVLGRNLKAMRDFDGNIED--TFGQVFQVSY-EVWGDIQTHDLVEGGGDIPVTNDNVHDYIQKYVEWTLQGSVAKQYEAFKKGFMRVCGGAAIELFTAEELELLVCGNPT-LDFEALEKVTHYDDGFEEDSPMIKHFWEVVHGFSEEEKRLLLKFATGSDRAPINGLSSL--TFVISKNGTDAERLPTSHTCFNHLLLPDYGTKEILEQKLRTAINQA-EGFX 457
                 689***********999999999999774322..........235*******************************.**************************999777..5599999754.4468999***********************************************************************.9**********************************************************..********9************************************9.9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.04u 0.43s 00:00:01.47 Elapsed: 00:00:01.07
# Mc/sec: 1536.36
//
Query:       MMETSP1325-20131115|255_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.59
# Mc/sec: 316.81
//
Query:       MMETSP1325-20131115|253_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.7    6.7  11.7          7    6.7   5.5    2.4  2  PF09666.5 Sororin protein
        8.6    5.0   8.9         13    4.5   6.2    1.3  1  PF14362.1 Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF09666.5  Sororin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.61   4.2e+03      65      65 ..      36      36 ..       9      59 .. 0.57
   2 ?    6.7   5.5     0.001         7      65     107 ..     132     175 ..      96     180 .. 0.75

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.61
  PF09666.5 65 t 65
               +
  MMETSP1325-20131115|253_1 36 Q 36
               2 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.001
  PF09666.5  65 t.rrtpsrlstssnsersaetssPerqatr.kaerqqerrnLFGF 107
                  +++ +rlst ++ e+++++ +P++ ++  +++ q+err+ FGF
  MMETSP1325-20131115|253_1 132 GhENSLTRLSTMRE-EEQQHSRAPSASSAVsTQSGQKERRSRFGF 175
                25777777777444.67788889987666579999********** PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   6.2    0.0018        13     124     246 ..       7     140 ..       3     170 .. 0.65

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.0018
  PF14362.1 124 aaqaqvaa...slsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaq..........aeletlkaqldaaqaeleankrkaaleeeraakvaeeqaansandGllaRl 246
                 +q+++++   ++++kl++l +  +++ a++++++++ n  e++++   +G++g+  aG G++  + ++     +           e ++ +++++ +++ ++  +   +  ++ +++  ++qa++s++   l Rl
  MMETSP1325-20131115|253_1   7 RIQKKLDKhmrDIDEKLETLLTVAKDKVAQATSKSSKRNSGEQQLDLSTSGKAGKDGAGGGDRMSTRENHARLSRtsedfagldfGETDKGQTRRGVQKTGIR--ESHSRNVRSADDVSPRKQANASGHENSLTRL 140
                4455555522245667777777777777788888899999999999999999999999999887776666555557888866666666666666666666666..4444444444444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1010  (0.0738736); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.43s 00:00:00.98 Elapsed: 00:00:00.63
# Mc/sec: 688.48
//
Query:       MMETSP1325-20131115|256_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   12.7   0.1      0.081   12.0   0.1    1.3  1  PF04621.8 PEA3 subfamily ETS-domain transcription factor N terminal domain


Domain annotation for each model (and alignments):
>> PF04621.8  PEA3 subfamily ETS-domain transcription factor N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1     6e-06     0.081     103     171 ..      87     149 ..      73     159 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6e-06
  PF04621.8 103 skkrsklpygekCLYsysaydrkpasgfkpaepkstpvspvapssaarqkqstlplsessppaaevPka 171
                s+  s++++ge+ L  ++a +    s+ +  ep+ tpvspv+p  ++   ++t+p  +ssp++   P +
  MMETSP1325-20131115|256_1  87 SRTYSHTHNGEASLRKMAAKE---RSARRCVEPPMTPVSPVTPAGTQ--PDPTGPGATSSPAE-GAPLS 149
                555568999999999977765...56778889999999999998885..88999998888875.55555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 681.07
//
Query:       MMETSP1325-20131115|252_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-44  151.5   0.1    2.1e-44  151.3   0.1    1.0  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.3   0.1   1.5e-48   2.1e-44       1     154 [.      11     173 ..      11     174 .. 0.86

  Alignments for each domain:
  == domain 1    score: 151.3 bits;  conditional E-value: 1.5e-48
  PF00160.16   1 lvdietss..kGrivieLfedkaPktvenFlklakeg...........fYdgtkfhrvikgfmiqgGdpsgkgangeek.kaggesipdEikkkklkh.krGalamartgpepnsngsqFfItlgdaphlDgkytvFGkVvegmdvvekieavetde.kpeknvkiksvg 154
                 ++d+++++   Gri++ L +d +P+tvenF+ l++ g           +++g+ fhrvi++fm+qgGd++  +   +++    g++++dE+  ++l+h  +G+l+ma+ g  pn+ngsqFf+++ ++ +lDgk++vFG V+ gmdvv++ieav++d+ +++k+v+i ++g
   MMETSP1325-20131115|252_1  11 FFDMTIGGvaSGRIEMTLRADVVPITVENFRCLCT-GekgtgasgkplHFKGSAFHRVIPNFMCQGGDFTRGNG--TGGeSIYGNKFADEN--FQLRHeGPGILSMANAG--PNTNGSQFFLCTVQTGWLDGKHVVFGSVTAGMDVVKAIEAVGSDRgQTSKPVVIADCG 173
                 57899987989***********************7.335577888999********************777644..32222333359****..56778688******998..7***************************************99888899999******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.33s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 753.14
//
Query:       MMETSP1325-20131115|257_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-35  120.3   0.0    8.2e-19   66.8   0.0    3.3  3  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    1.6e-26   91.9   0.1    2.3e-13   49.8   0.0    3.3  3  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    3.5e-21   74.6   0.1    1.1e-07   31.4   0.0    3.3  3  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.014   15.0   0.6       0.12   12.0   0.0    2.5  3  PF08777.6  RNA binding motif


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.0   1.6e-13   5.5e-10       1      61 [.      33      93 ..      33      97 .. 0.93
   2 !   66.8   0.0   2.4e-22   8.2e-19       1      61 [.     141     201 ..     141     212 .. 0.91
   3 !   11.1   0.0   5.9e-05       0.2      13      69 ..     357     410 ..     356     411 .. 0.91

  Alignments for each domain:
  == domain 1    score: 38.6 bits;  conditional E-value: 1.6e-13
                EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTT CS
  PF00076.17  1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseedaekAlealng 61
                +fV+ L   ++e++ +++F+k+G+++ + ++rd  t+r+kgfa+Ve+++ e+   +l  lng
   MMETSP1325-20131115|257_1 33 VFVSQLVMKADERKCRKYFEKVGKVKQVIMIRDkYTNRHKGFAYVEMKDLESIPLVLM-LNG 93
                79************************************************99877766.666 PP

  == domain 2    score: 66.8 bits;  conditional E-value: 2.4e-22
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTT CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealng 61 
                 l+VgnL+  +te++L+++F +fG +e++++vrde g skg++fV+Fe  eda+ Ale+l  
   MMETSP1325-20131115|257_1 141 LYVGNLHVHITESDLEQVFMPFGTVENVSVVRDEMGGSKGYGFVKFERVEDAKTALEKLTS 201
                 8*********************************************************986 PP

  == domain 3    score: 11.1 bits;  conditional E-value: 5.9e-05
                 HHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17  13 eeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklggrel 69 
                 e+++   skfG++ ++ + +    ++ g  +  F +   a++A ++l g+ + gr +
   MMETSP1325-20131115|257_1 357 EDVEGECSKFGSVLHCFVESR---QPGGLVYLLFSTTPMAQQAAQSLGGRWFAGRMI 410
                 66677789*********9995...*****************************9976 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   4.3e-11   1.5e-07       1      56 [.      33      89 ..      33      98 .. 0.91
   2 !   49.8   0.0   6.8e-17   2.3e-13       1      69 []     141     212 ..     141     212 .. 0.94
   3 !    7.3   0.0    0.0012       4.1      14      68 ..     358     410 ..     352     411 .. 0.82

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 4.3e-11
  PF14259.1  1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkal 56
               ++v+ l  +++e + r+ f++ gkv+ v ++r+k   r +gfA+ve+++ e++  +l
  MMETSP1325-20131115|257_1 33 VFVSQLVMKADERKCRKYFEKVGKVKQVIMIRDKYtNRHKGFAYVEMKDLESIPLVL 89
               789999999*************************98*************99876665 PP

  == domain 2    score: 49.8 bits;  conditional E-value: 6.8e-17
  PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkdgrgrgfAfvefeseedAqkalkkln...lvlkgrtir 69 
                lyv++l+  +te+dl + f p+g+ve+v+++r+  g ++g++fv+fe  edA+ al+kl    l l+g+ i+
  MMETSP1325-20131115|257_1 141 LYVGNLHVHITESDLEQVFMPFGTVENVSVVRDEMGGSKGYGFVKFERVEDAKTALEKLTsigLELMGKAIK 212
                79*******************************88***********************94455999*99986 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.0012
  PF14259.1  14 dlreffspygkvegvriprnkdgrgrgfAfvefeseedAqkalkkln.lvlkgrti 68 
                d+    s++g+v  + +      ++ g  ++ f++   Aq+a + l+  ++ gr+i
  MMETSP1325-20131115|257_1 358 DVEGECSKFGSVLHCFVESR---QPGGLVYLLFSTTPMAQQAAQSLGgRWFAGRMI 410
                55555566888877777764...489999*****************99******98 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   4.6e-10   1.6e-06       2      33 ..      48      84 ..      48     100 .. 0.92
   2 !   31.4   0.0   3.2e-11   1.1e-07       4      53 ..     158     213 ..     157     215 .. 0.90
   3 !   11.5   0.0   5.1e-05      0.18       5      55 ..     363     414 ..     362     414 .. 0.88

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 4.6e-10
  PF13893.1  2 yklfskfGkverikifrkk.....ggqAfvefdtvea 33
               +k+f+k+Gkv+++++ r+k     +g+A+ve++++e+
  MMETSP1325-20131115|257_1 48 RKYFEKVGKVKQVIMIRDKytnrhKGFAYVEMKDLES 84
               69********************999*********998 PP

  == domain 2    score: 31.4 bits;  conditional E-value: 3.2e-11
  PF13893.1   4 lfskfGkverikifrkk....ggqAfvefdtveaArkakeyln..gvklygktLkv 53 
                 f +fG+ve++ + r+     +g++fv+f+ ve+A++a+e+l   g  l gk +kv
  MMETSP1325-20131115|257_1 158 VFMPFGTVENVSVVRDEmggsKGYGFVKFERVEDAKTALEKLTsiGLELMGKAIKV 213
                599****************999*******************975677788888888 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 5.1e-05
  PF13893.1   5 fskfGkveriki.frkkggqAfvefdtveaArkakeylngvklygktLkvey 55 
                +skfG v  + +  r+ gg ++  f+t+  A++a ++l g+++ g+ + +e+
  MMETSP1325-20131115|257_1 363 CSKFGSVLHCFVeSRQPGGLVYLLFSTTPMAQQAAQSLGGRWFAGRMITCEF 414
                9*****987776355559****************************998875 PP

>> PF08777.6  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.3      0.32   1.1e+03      47      94 ..      10      59 ..       8      70 .. 0.60
   2 ?   12.0   0.0   3.6e-05      0.12      12      70 ..     149     209 ..     142     217 .. 0.74
   3 ?   -2.8   0.0       1.5   5.2e+03      20      56 ..     361     399 ..     353     401 .. 0.63

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.32
               -..HHHH---TTTT----B-TTSSS-EEE-----HHH..HHHHHHHHHHH CS
  PF08777.6 47 deaakkalekateanegklkikeaevtlellegeeEk..eylkkiledkq 94
               dea ++a+++  e+++  + ++   v+  +++ +e k  +y++k+ + kq
  MMETSP1325-20131115|257_1 10 DEATREARRQQEEIDDLTKDQRTVFVSQLVMKADERKcrKYFEKVGKVKQ 59
               67788888888888555555555555555555555433366666666665 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 3.6e-05
                S--HHHHHHHT-----EEEE-------...---..EEESS-..HHHH---TTTT----B-TTSS CS
  PF08777.6  12 elsredikelfsklgevkyvdfkegdk...ege..vrFkedeaakkalekateanegklkikea 70 
                +++ +d+ ++f  +g+v+ v + +++    +g+  v+F+  e+ak alek+t +   +l++ ++
  MMETSP1325-20131115|257_1 149 HITESDLEQVFMPFGTVENVSVVRDEMggsKGYgfVKFERVEDAKTALEKLTSI---GLELMGK 209
                677899999******99888887655411143344*****************98...5555544 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 1.5
                HHT-----EE..EE----------EEESS-..HHHH--- CS
  PF08777.6  20 elfsklgevk..yvdfkegdkegevrFkedeaakkalek 56 
                   sk+g+v   +v+  +     +++F +   a++a ++
  MMETSP1325-20131115|257_1 361 GECSKFGSVLhcFVESRQPGGLVYLLFSTTPMAQQAAQS 399
                555666666422555555555567889988888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.44s 00:00:01.18 Elapsed: 00:00:00.70
# Mc/sec: 1519.98
//
Query:       MMETSP1325-20131115|263_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-16   59.3   0.0    3.2e-16   59.1   0.0    1.0  1  PF00069.20 Protein kinase domain
    6.7e-16   58.0   0.0    1.6e-15   56.7   0.0    1.6  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.0   4.6e-20   3.2e-16     151     244 ..      27     125 ..      17     127 .] 0.86

  Alignments for each domain:
  == domain 1    score: 59.1 bits;  conditional E-value: 4.6e-20
                 ESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH.........HHHHHHHHHHT-SS CS
  PF00069.20 151 sseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks.........eelkdlikkllekd 244
                 ++ ++t  +gt ++mAPEvl  ++ y++++D++s+Gvil+ellt++ p++g    +q ++   + +   + d p s++           +  +dl+++++++d
   MMETSP1325-20131115|263_1  27 HQATMTGNCGTVHWMAPEVLT-NDRYSETADMYSFGVILWELLTRRCPYEGL---TQFQVAVAVVRDGKRPDLPPSTPGGggagsstcpAAYRDLVERCWAQD 125
                 68899****************.*****************************9...7777777777766666666666655778899999999********988 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0   2.4e-19   1.6e-15     163     244 ..      32     124 ..      23     127 .] 0.77

  Alignments for each domain:
  == domain 1    score: 56.7 bits;  conditional E-value: 2.4e-19
                 TT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---...........TTSBHHHHHHHHHHT-S CS
  PF07714.12 163 eeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekp...........ekcpeelyelmkqCwee 244
                 +++   v+WmapE+l++ ++++++D++sfGv+lwE++t+ + py+gl++ +v+ ++ ++gkr + p           ++cp+   +l+++Cw++
   MMETSP1325-20131115|263_1  32 TGNCGTVHWMAPEVLTNDRYSETADMYSFGVILWELLTR-RCPYEGLTQFQVAVAVvRDGKRPDLPpstpggggagsSTCPAAYRDLVERCWAQ 124
                 4555789*******************************5.6******999988777699**987772222222222235777777778888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.61
# Mc/sec: 498.91
//
Query:       MMETSP1325-20131115|259_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-30  106.1   0.5    2.4e-30  105.7   0.3    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.7   0.3   1.8e-34   2.4e-30      14     155 ..      56     213 ..      45     214 .. 0.78

  Alignments for each domain:
  == domain 1    score: 105.7 bits;  conditional E-value: 1.8e-34
                 X...XXXXXX.---............-TTTTT--------TTT------------------S--TT--...STT.---.----S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT------- CS
  PF00504.16  14 g...fDplglskdp............tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpa..wae.agg.lslptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 g   +Dp+++++              ++k+lreaE++HGRv+Mla++G +++ ++  ++++ +  +  a  w++  +  l + +++++q +l+ig++e ++       ++     +   G+lgf p+g a k+  +++el+l+E+knGRlAMia++gf++q+
   MMETSP1325-20131115|259_1  56 GnkvWDPMSFGSISkviggehdtvmpDVKWLREAEIKHGRVCMLAFVGTCAAANGVVFPGDLGGFHYEAckWYDgLASgLATNSFGMAQLFLAIGLIEGFSFPAEFWVGG---G-DREAGDLGFLPFGDAaKNGRDFDELQLSELKNGRLAMIAMAGFFAQH 213
                 3455*******6445899999********************************88775544333333335588532222347777888***********97665443333...2.3559********9777*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.33s 00:00:00.83 Elapsed: 00:00:00.83
# Mc/sec: 652.50
//
Query:       MMETSP1325-20131115|262_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-16   60.5   0.1    2.5e-16   59.4   0.0    1.5  2  PF00293.23 NUDIX domain


Domain annotation for each model (and alignments):
>> PF00293.23  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.23   3.1e+03     103     121 ..      26      45 ..      18      53 .. 0.66
   2 !   59.4   0.0   1.9e-20   2.5e-16       5     118 ..      69     190 ..      66     198 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 0.23
                 S.TEEEEEEEEHHHHHHHHH CS
  PF00293.23 103 t.Evsevrwvpleelldlal 121
                 + Ev + rw+ l  l     
   MMETSP1325-20131115|262_1  26 SqEVGSTRWLRLSTLTYTDR 45 
                 45899999998887765555 PP

  == domain 2    score: 59.4 bits;  conditional E-value: 1.9e-20
                 EEEEEEETTS......EEEEEEECSTTSSTTEEEESBEEETTTTSHHHHHHHHHHHHHHS-EEEEEEEEEEEEEEETTCCCSEEEEEEEEEEEEETGGGCSTTTS.....TEEEEEEEEHHHHHH CS
  PF00293.23   5 vsvillnedg......kvLlvqrsrskltapglwefPgGkvdkgEspeeaAvRElkEEtGidlekvrlvgvanydaptddpkreevifflaelpddepeiilntt.....Evsevrwvpleelld 118
                 v+++++   g      +++lv+++r+++ ++  +e+P+G +d+gE+p+ aA+REl+EEtG+  e+++     +  +p+ +   e+v ++ +e++ + pe++++t+     E +ev  vpl++l++
   MMETSP1325-20131115|262_1  69 VGILVILRGGedagedQIVLVKQFRPPM-NAMSIEMPAGLIDAGEDPQTAALRELFEETGYVGEVKGSPSPPIALSPGLTN--ERVCIVQVEVDLTKPENQNPTQhleeaEDIEVLKVPLRSLQE 190
                 5555555555559999***********9.**************************************************97..**************8888888899988888888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.19s 00:00:00.65 Elapsed: 00:00:00.67
# Mc/sec: 776.13
//
Query:       MMETSP1325-20131115|265_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-45  153.0   0.0    5.6e-45  152.8   0.0    1.0  1  PF12689.2 Acid Phosphatase


Domain annotation for each model (and alignments):
>> PF12689.2  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.8   0.0   4.1e-49   5.6e-45       1     168 [.      12     180 ..      12     181 .] 0.96

  Alignments for each domain:
  == domain 1    score: 152.8 bits;  conditional E-value: 4.1e-49
                ---SEEEE-STTTSSSS-TTTS..S-S-EEE----.-EEE----EE---TTHHHH---TTT.----EEEEE--S-----HHHHHHTT--..........--ESE..EEE----HHHHHHHHHHH----GGGEEEEES-HHHHHH------EEEE------HHHHH---HHHHH CS
  PF12689.2   1 slpklivFDLDyTLWpfevdtl..vsaplkkekkksevvDrsgeelslypdveeiLeelke.kgvklavASrtdapdlArelLklLeineakekekklldvfda..veiypgsktkhfkkiqkktgieyeemlFFDdearnievvsklgvtfvlvkdGltreelekglkkwrk 168
                +lp+++vFDLD + W++e+++l   ++p++ ++++++++Dr g  ++l+++++++ + +++  + +la+ASr+d+p++A e+L++++i     ++ ++++ +d+  veiy++sk+ h+++i+ k+g+++++mlFFDd   ni++vs+lgv ++l+++G+ +e++  gl +++ 
  MMETSP1325-20131115|265_1  12 PLPAIVVFDLDACCWSPEMYQLwgGGSPFTYDAETNSCTDRAGVVCRLFEAIPTAWSLVADsPNSRLAIASRCDEPKWADEILRKFKIA----NGLTMMEAVDDnlVEIYKSSKKVHLTAIRDKSGVAFSDMLFFDDDPANIRDVSELGVCSILTPNGVDEEAWLGGLATFAA 180
                58********************8889*******************************887769**************************....8888888888779***************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 760.95
//
Query:       MMETSP1325-20131115|268_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 311.98
//
Query:       MMETSP1325-20131115|269_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   11.8   0.9       0.29   10.3   0.1    2.0  3  PF05791.6 Bacillus haemolytic enterotoxin (HBL)
       0.11   11.2   1.7       0.39    9.4   1.2    1.7  1  PF08767.6 CRM1 C terminal


Domain annotation for each model (and alignments):
>> PF05791.6  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.75   5.1e+03     100     120 ..      57      77 ..      54      83 .. 0.72
   2 ?   -1.3   0.1      0.15     1e+03     127     155 ..     103     131 ..     101     135 .. 0.80
   3 ?   10.3   0.1   4.3e-05      0.29      86     139 ..     157     212 ..     149     214 .] 0.84

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.75
  PF05791.6 100 vdkkdketlkeglekLqeeiq 120
                v  kd+ t++  ++ L+e  q
  MMETSP1325-20131115|269_1  57 VAAKDTGTFMTLMTVLHEGLQ 77 
                556777788888887777665 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.15
  PF05791.6 127 kqlleeLkafknklakdtksfksdvdelt 155
                +++ + L+ + ++ a+d++ f s +++l 
  MMETSP1325-20131115|269_1 103 DKDWQSLQMLNAHVAQDSTLFPSLTSTLF 131
                56778999999999999999988777765 PP

  == domain 3    score: 10.3 bits;  conditional E-value: 4.3e-05
  PF05791.6  86 dtkFqnyYdtLveavdkkdketlkeglekLqeeiqknqk..evkqlleeLkafknk 139
                ++ F++y d L+++   +++++l e++ kL +++q+n +  + ++  ++L +f+++
  MMETSP1325-20131115|269_1 157 EQSFTSYRDHLISTQSPENQQKLNEAFAKLLTDVQRNLEptNRDRFAQHLATFRQA 212
                678*********************************98722455668899999875 PP

>> PF08767.6  CRM1 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.2   5.7e-05      0.39     115     298 ..      17     211 ..       7     214 .] 0.77

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 5.7e-05
  PF08767.6 115 leavfectldmikkdfeeyPehreeffellqaivkhcfdallklpseqfklvidsivwafkHterevaetgLnillellknvee.kkseaaneFyknyylsilkeilevltDtdhks....gFkeqaelLakllrlvesgsiqvplle......qvtsnkvfvseyvvelLsnafpnlnqkqveafveslfklae 298
                le  ++ ++++  +d+ ++P++  ++f++l+ + +++++     +  +f +++  +  +++   +  ++++ + +  l + +   ++++  +    n ++   ++ +  lt t  +      ++++  + + +l+l+  ++ +  +++      q+ +n++ ++e  ++lL++   nl++++   f ++l ++ +
  MMETSP1325-20131115|269_1  17 LEVALQLIMSVGLEDVLSFPKLSRHYFSFLDVLFRNHLPFVAAKDTGTFMTLMTVLHEGLQALDPPMSTHCASAIDYLASYLFInRDKDWQSLQMLNAHVAQDSTLFPSLTSTLFTQllfgPYSNHWSVTRPMLSLMMADEQSFTSYRdhlistQSPENQQKLNEAFAKLLTDVQRNLEPTNRDRFAQHLATFRQ 211
                444455555555689999*********************9999999*********9999999999999999999988877754433333333333344455556666666666655411114789999999999999999888888888999999999**********************999999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.68
# Mc/sec: 754.15
//
Query:       MMETSP1325-20131115|270_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00047   17.9   5.7    0.00051   17.8   3.9    1.0  1  PF01576.14 Myosin tail
     0.0022   17.3   4.4     0.0024   17.1   3.0    1.0  1  PF13870.1  Domain of unknown function (DUF4201)
     0.0052   16.3   2.5     0.0058   16.2   1.7    1.2  1  PF08781.5  Transcription factor DP
  ------ inclusion threshold ------
      0.018   14.6   0.4      0.018   14.6   0.3    1.0  1  PF09769.4  Apolipoprotein O
      0.049   13.0   2.7      0.052   12.9   1.8    1.0  1  PF00015.16 Methyl-accepting chemotaxis protein (MCP) signalling domain
       0.06   13.0   0.8      0.095   12.3   0.5    1.4  1  PF07889.7  Protein of unknown function (DUF1664)
      0.077   12.3   4.3       0.11   11.8   3.0    1.3  1  PF01442.13 Apolipoprotein A1/A4/E domain
      0.091   12.3   7.6      0.095   12.3   5.2    1.0  1  PF07926.7  TPR/MLP1/MLP2-like protein
      0.092   11.8   0.2      0.099   11.7   0.2    1.0  1  PF12896.2  Anaphase-promoting complex, cyclosome, subunit 4
      0.097   12.8   4.0       0.11   12.6   2.7    1.1  1  PF05615.8  Tho complex subunit 7
      0.099   11.4   2.5       0.11   11.3   1.7    1.0  1  PF13949.1  ALIX V-shaped domain binding to HIV
       0.11   12.3   0.2       0.11   12.2   0.2    1.1  1  PF09636.5  XkdW protein
       0.11   12.2   6.3       0.52   10.0   4.1    1.8  1  PF06428.6  GDP/GTP exchange factor Sec2p
       0.15   11.5   1.9       0.16   11.4   1.3    1.0  1  PF04546.8  Sigma-70, non-essential region
       0.15   11.9   2.6        0.2   11.5   1.8    1.2  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.18   10.6   1.7        0.2   10.4   1.2    1.0  1  PF04111.7  Autophagy protein Apg6
       0.18   11.1   2.5       0.28   10.5   1.8    1.3  1  PF05769.6  Protein of unknown function (DUF837)
       0.19   11.2   4.0       0.19   11.1   2.8    1.1  1  PF04156.9  IncA protein
        0.2    9.0   2.1       0.19    9.1   1.4    1.0  1  PF05478.6  Prominin
       0.21   10.9   3.7       0.32   10.3   2.6    1.4  1  PF04977.10 Septum formation initiator
       0.21   11.8   1.9       0.23   11.6   1.3    1.1  1  PF06156.8  Protein of unknown function (DUF972)
       0.22   11.8   1.9       0.25   11.6   1.3    1.1  1  PF09177.6  Syntaxin 6, N-terminal
       0.25   10.7   2.6       0.28   10.6   1.8    1.0  1  PF05546.6  She9 / Mdm33 family
       0.26    9.7   4.8       0.29    9.6   3.3    1.0  1  PF09731.4  Mitochondrial inner membrane protein
        0.3    9.0   2.9       0.34    8.8   2.0    1.0  1  PF06419.6  Conserved oligomeric complex COG6
       0.33    9.7   5.3       0.36    9.6   3.7    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.35   10.5   6.3       0.78    9.4   4.4    1.6  1  PF02185.11 Hr1 repeat
       0.75    9.3   5.3       0.85    9.1   3.7    1.0  1  PF03962.10 Mnd1 family
       0.78    6.8   5.4       0.79    6.8   3.7    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
          1    9.0   6.9        3.3    7.4   1.3    1.7  2  PF12329.3  TATA element modulatory factor 1 DNA binding
        1.4    8.4   4.5         71    2.9   3.1    2.4  1  PF08621.5  RPAP1-like, N-terminal


Domain annotation for each model (and alignments):
>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   3.9   1.1e-06   0.00051      34      85 ..       2      53 ..       1      59 [. 0.94

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.1e-06
  PF01576.14 34 vaqlqkkikelearieeleeeleaeraaRakaekeradlsreleelserLee 85
                +a+++k+i++  ar++ + e++ + +++ ++a+ +r++ls+e eel  +L+ 
   MMETSP1325-20131115|270_1  2 KATAKKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDT 53
                67899*********************************************96 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   3.0   5.5e-06    0.0024      55     102 ..       6      53 ..       2      57 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 5.5e-06
  PF13870.1  55 nekieernkeLkkLkkkttktvhalthlkeklhfleeeleelkkelke 102
                ++ i+++++ L ++++++t+t ++l      +++l++e+eel++el++
  MMETSP1325-20131115|270_1   6 KKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDT 53 
                68899**************************************99986 PP

>> PF08781.5  Transcription factor DP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.7   1.3e-05    0.0058      11      48 ..       3      41 ..       1      53 [. 0.86

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.3e-05
  PF08781.5 11 kklreriekKkaqLqeLeeqqvalknLveRNqeless.e 48
                 ++++i++K a L+ + eq+   k+L+eR +++ ++ +
  MMETSP1325-20131115|270_1  3 ATAKKSIQQKDARLAAMSEQVTQTKQLLERANAARKElS 41
               56789*************************998877644 PP

>> PF09769.4  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.3     4e-05     0.018      26      68 ..       6      54 ..       1      61 [. 0.76

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 4e-05
  PF09769.4 26 akllgensl......ysvrptdrLeaqirsaRlfleeklsavedavntv 68
               +k+++++ +      ++v++t++L ++ + aR+ l+++++ ++++++t 
  MMETSP1325-20131115|270_1  6 KKSIQQKDArlaamsEQVTQTKQLLERANAARKELSQECEELRSELDTH 54
               33333333344666799************************99999875 PP

>> PF00015.16  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.8   0.00012     0.052     163     210 ..       7      54 ..       2      57 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.00012
                 --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00015.16 163 asieevnqaveeidevtkenaalveeaaaaaetleeqaeeleelvaqF 210
                 +si++  +  + ++e + ++  l e a+aa ++l+++ eel++ ++  
   MMETSP1325-20131115|270_1   7 KSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTH 54 
                 678888888899999999999********************9988765 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.5   0.00022     0.095      44      80 ..      18      54 ..       7      59 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00022
  PF07889.7 44 AvasvtkqlekvseavasakkhLsqridnlddkldeq 80
               A+++   q +++ e  ++a+k+Lsq+ ++l ++ld +
  MMETSP1325-20131115|270_1 18 AMSEQVTQTKQLLERANAARKELSQECEELRSELDTH 54
               44444456678889999***************99975 PP

>> PF01442.13  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.0   0.00025      0.11      69     110 ..       9      53 ..       1      60 [. 0.39

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00025
                 -HHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHH--------.- CS
  PF01442.13  69 leelrqrlkpyaeelre..qlnrdveelreqLapvaeelrsrl.r 110
                 +++  +rl+ + e++ +  ql ++++++r+ L++  eelrs l  
   MMETSP1325-20131115|270_1   9 IQQKDARLAAMSEQVTQtkQLLERANAARKELSQECEELRSELdT 53 
                 333333333333333322244444444444444444444444322 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   5.2   0.00022     0.095      55     106 ..       3      54 ..       1      60 [. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00022
  PF07926.7  55 aetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLeve 106
                a++ +++++  + la +++++++++++++ a+a  +el ++ ee +s+L++ 
  MMETSP1325-20131115|270_1   3 ATAKKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTH 54 
                677899999999************************************9986 PP

>> PF12896.2  Anaphase-promoting complex, cyclosome, subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   0.00022     0.099      12      57 ..       9      54 ..       2      61 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00022
  PF12896.2 12 lekskrylvelarkssqlqslleYinetlrllkeewkeavslldrk 57
               ++++ ++l  ++ +++q ++lle +n+  ++l++e +e  s+ld++
  MMETSP1325-20131115|270_1  9 IQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTH 54
               6778999***********************************9654 PP

>> PF05615.8  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.7   0.00024      0.11      87     129 ..      13      56 ..       2      59 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00024
  PF05615.8  87 ektiealkdeieelrkeLeeaketrknrk.eydeLaekitsnpv 129
                ++++ a+++++ + ++ Le+a++ rk+   e++eL +++ ++ v
  MMETSP1325-20131115|270_1  13 DARLAAMSEQVTQTKQLLERANAARKELSqECEELRSELDTHHV 56 
                4466799999************999987669****999998875 PP

>> PF13949.1  ALIX V-shaped domain binding to HIV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.7   0.00024      0.11     134     177 ..      14      57 ..       2      60 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00024
                -SSG---HHHHHHHHHHHHHHHHHHHT---HHHHHH.----HHH CS
  PF13949.1 134 eksdevseqikrlrelleklnelkaeRaklleeLkekihdddis 177
                 +   +seq+++ ++lle+ n  ++e ++  eeL++++ +  +s
  MMETSP1325-20131115|270_1  14 ARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTHHVS 57 
                34456699999999999999999999999999999987766555 PP

>> PF09636.5  XkdW protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   0.00025      0.11      64     103 ..      20      59 ..       3      63 .] 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00025
  PF09636.5  64 Pvqldllaqelskeklarkqleelnktlgnelsklklell 103
                  q+  + q l + + ark+l + +++l +el +  ++ l
  MMETSP1325-20131115|270_1  20 SEQVTQTKQLLERANAARKELSQECEELRSELDTHHVSAL 59 
                4688888999999999***************988766655 PP

>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.1    0.0012      0.52      54      94 ..       3      43 ..       1      50 [. 0.84

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0012
               HHHHHHHHHHHHHHHHHHHHHHHHHHCTTT-------XXXX CS
  PF06428.6 54 ekleeqLkekelllevlqaqlkeLKelleslekekngssek 94
               +++++ ++ k++ l+++ +q+++ K+lle+ ++++++ s++
  MMETSP1325-20131115|270_1  3 ATAKKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQE 43
               7899************************9999888666544 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.3   0.00037      0.16      80     123 ..      12      55 ..       2      59 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00037
  PF04546.8  80 arerFaelrkqyeklekalekegrkskkaekareelaeefksfr 123
                  +r+a++++q +++++ le+ +++ k+  ++ eel+ e+ + +
  MMETSP1325-20131115|270_1  12 KDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTHH 55 
                4679**********************************998766 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.8   0.00045       0.2      25      64 ..      10      49 ..       2      59 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00045
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT CS
  PF02403.17 25 kedvdelleldeerrelqveleelqaerNelskeIgkakk 64
                +++ ++l ++ e++ ++++ le+++a r+els+e +++ +
   MMETSP1325-20131115|270_1 10 QQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRS 49
                3333456666666666667777777777777766665554 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.2   0.00046       0.2      76     129 ..       6      59 ..       2      61 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00046
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF04111.7  76 kkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklkkl 129
                kk+++++  +l  ++++  + ++ le+ ++ +++l++e e+  +el  +++  l
  MMETSP1325-20131115|270_1   6 KKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTHHVSAL 59 
                899******************************************999988776 PP

>> PF05769.6  Protein of unknown function (DUF837)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.8   0.00063      0.28      49      90 ..      13      55 ..       2      60 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00063
  PF05769.6 49 dieelkelakekpr..vliqqeneqirelqqENkeLkvsleehq 90
               d + l  ++++ ++   l+++ n   +el qE  eL+  l+ h+
  MMETSP1325-20131115|270_1 13 D-ARLAAMSEQVTQtkQLLERANAARKELSQECEELRSELDTHH 55
               3.566666665544447888888888888888888888887654 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.8   0.00044      0.19     117     153 ..      11      51 ..       1      59 [. 0.49

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00044
  PF04156.9 117 dlellq....eelksleerlesleesikelakeirelreei 153
                +++  +    e+ ++ ++ le ++ + kel++e++elr+e+
  MMETSP1325-20131115|270_1  11 QKDARLaamsEQVTQTKQLLERANAARKELSQECEELRSEL 51 
                11111133445555555555555555555555555555333 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.4   0.00043      0.19     240     281 ..      14      55 ..       1      60 [. 0.79

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00043
  PF05478.6 240 eevvelgqvlkemkeaLesvsktvkelkeegsqlesglssvr 281
                ++++ +++++ ++k+ Le+ ++  kel +e ++l+s+l  + 
  MMETSP1325-20131115|270_1  14 ARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTHH 55 
                56677788****************************998775 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.6   0.00072      0.32      18      53 ..      15      50 ..       4      54 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00072
  PF04977.10 18 alyqlkqeiaalqaelaklkaeneeLeaevkdLksd 53
                +l ++ +++++ ++ l++ +a ++eL +e ++L+s+
   MMETSP1325-20131115|270_1 15 RLAAMSEQVTQTKQLLERANAARKELSQECEELRSE 50
                5678899**************************876 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.3   0.00052      0.23       8      55 ..       7      54 ..       2      60 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00052
  PF06156.8  8 dklseleeqleelleeleelkkelkelleenaelkleneklrerleel 55
               +++++ + +l ++ e++++ k+ l++     +el+ e e+lr++l++ 
  MMETSP1325-20131115|270_1  7 KSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELDTH 54
               567888889999999999999999999999999999999999999865 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.3   0.00057      0.25       7      56 ..       6      52 ..       1      56 [. 0.57

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00057
  PF09177.6  7 keevqksidkleslyrsweelrsdstsskelkeltkeLenalesiewdle 56
               k+++q++ ++l  + +++ + ++     ++++ ++keL++++e+++ +l+
  MMETSP1325-20131115|270_1  6 KKSIQQKDARLAAMSEQVTQTKQL---LERANAARKELSQECEELRSELD 52
               344444434443333333333333...34677888888888888887775 PP

>> PF05546.6  She9 / Mdm33 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.8   0.00063      0.28      38      80 ..       6      48 ..       3      59 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00063
  PF05546.6 38 kksieeleeeleeakeevkeakkaykeaieeRsesqrevneLL 80
               kksi++++++l+++ e+v+++k+  ++a ++R e  +e +eL 
  MMETSP1325-20131115|270_1  6 KKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELR 48
               99********************************999999985 PP

>> PF09731.4  Mitochondrial inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.3   0.00067      0.29     377     427 ..       5      56 ..       2      60 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00067
  PF09731.4 377 rlakLeelnsrlkgLekalesrseaede.nrkvqqLwlaveaLkskLksgsa 427
                 ++ +++ ++rl ++++++ + ++ +++ n + ++L + +e+L+s L++++ 
  MMETSP1325-20131115|270_1   5 AKKSIQQKDARLAAMSEQVTQTKQLLERaNAARKELSQECEELRSELDTHHV 56 
                56778888999999999999999976551666789************99975 PP

>> PF06419.6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.0   0.00078      0.34      43      90 ..       5      52 ..       3      57 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00078
  PF06419.6 43 vaeqlkrieetieklnetceemkkqlekakqktkdlleeaselkeqke 90
                ++++++ ++++++++e ++++k+ le+a++  k+l +e +el+++ +
  MMETSP1325-20131115|270_1  5 AKKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELD 52
               57899999************************************9976 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.7   0.00082      0.36      61     108 ..       5      52 ..       2      60 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00082
  PF10186.4  61 lklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle 108
                 k  +++k +r++ +++++ q+k+ +e++++ ++el+++ +++rs l 
  MMETSP1325-20131115|270_1   5 AKKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSELD 52 
                566778888888888888888888888888888888888888888887 PP

>> PF02185.11  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   4.4    0.0018      0.78      22      57 ..      18      52 ..       1      58 [. 0.87

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0018
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF02185.11 22 nmlraletdkksvlqeaesklreseqkielLkeqLe 57
                +m ++  t+ k++l++a++ ++e++q+ e+L+++L 
   MMETSP1325-20131115|270_1 18 AMSEQV-TQTKQLLERANAARKELSQECEELRSELD 52
                577774.777789*********************96 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.7    0.0019      0.85      74     121 ..       5      53 ..       2      60 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0019
  PF03962.10  74 lkkeleelkqrikelqaeiekekkkreet.eereelleelkeleeelkk 121
                 +kk +++ ++r++ + +++ ++k+  e + + r+el +e++el++el+ 
   MMETSP1325-20131115|270_1   5 AKKSIQQKDARLAAMSEQVTQTKQLLERAnAARKELSQECEELRSELDT 53 
                 5666666667777777776666665555545566666666666666554 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.7    0.0018      0.79     620     664 ..       6      50 ..       1      60 [. 0.31

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0018
  PF12128.3 620 eakqkqaeeqlkqlnaeleeakravaeakqalkqarlelqrlkne 664
                +++++q +++l+++++++++ k+ +++a++a k+  +e + l++e
  MMETSP1325-20131115|270_1   6 KKSIQQKDARLAAMSEQVTQTKQLLERANAARKELSQECEELRSE 50 
                222222222222222222222222222222222222222222222 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   1.3    0.0075       3.3      44      73 ..       4      33 ..       2      34 .. 0.89
   2 ?    5.2   1.3     0.037        16      49      73 ..      30      54 ..      25      55 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0075
  PF12329.3 44 elekeieelkkkleklekeleeleerlkra 73
                + k+i++ +++l+  ++++ + +++l+ra
  MMETSP1325-20131115|270_1  4 TAKKSIQQKDARLAAMSEQVTQTKQLLERA 33
               5789999*******************9998 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.037
  PF12329.3 49 ieelkkkleklekeleeleerlkra 73
               +e++++  ++l++e eel+++l+++
  MMETSP1325-20131115|270_1 30 LERANAARKELSQECEELRSELDTH 54
               6777888899999999999998876 PP

>> PF08621.5  RPAP1-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   3.1      0.16        71      18      33 ..      38      53 ..      10      60 .. 0.75

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.16
  PF08621.5 18 eEIeeereeLlerLDP 33
                E  +e eeL++ LD 
  MMETSP1325-20131115|270_1 38 KELSQECEELRSELDT 53
               4667888888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1778  (0.130047); expected 273.4 (0.02)
Passed bias filter:                     1470  (0.107519); expected 273.4 (0.02)
Passed Vit filter:                       258  (0.0188707); expected 13.7 (0.001)
Passed Fwd filter:                        31  (0.00226741); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              31  [number of targets reported over threshold]
# CPU time: 0.50u 0.52s 00:00:01.02 Elapsed: 00:00:00.80
# Mc/sec: 188.71
//
Query:       MMETSP1325-20131115|258_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-09   36.6  15.6    5.6e-09   35.7  10.8    1.5  1  PF00170.16 bZIP transcription factor
     0.0074   15.9  14.4     0.0074   15.9  10.0    2.1  2  PF07716.10 Basic region leucine zipper
  ------ inclusion threshold ------
       0.21   10.9   0.0       0.21   10.9   0.0    3.4  3  PF07557.6  Shugoshin C terminus


Domain annotation for each model (and alignments):
>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7  10.8   1.2e-12   5.6e-09       1      53 [.      83     135 ..      83     144 .. 0.91

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 1.2e-12
                 XXXXCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHH CS
  PF00170.16   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                 e+++k e rk++NR +A +sR++K  +ie+Le  v +L +eN +Lk e+++ +
   MMETSP1325-20131115|258_1  83 ERARKLELRKERNRASAAASRKKKDDRIEQLEAQVRALLGENARLKLEAQMKR 135
                 7999******************************************9987655 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9  10.0   1.6e-06    0.0074       8      50 ..      91     133 ..      85     140 .. 0.87
   2 ?   -1.5   0.4      0.45     2e+03      15      22 ..     188     195 ..     182     196 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.6e-06
  PF07716.10   8 rRrrNreAArrsRekkkakeeeleervkeLeeeNaqLrqkveq 50 
                 r++rNr++A+ sR+kk  + e+le +v +L  eNa+L+ + ++
   MMETSP1325-20131115|258_1  91 RKERNRASAAASRKKKDDRIEQLEAQVRALLGENARLKLEAQM 133
                 666**********************************766554 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.45
  PF07716.10  15 AArrsRek 22 
                 AA+r R++
   MMETSP1325-20131115|258_1 188 AAARLRDR 195
                 9*****99 PP

>> PF07557.6  Shugoshin C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.7     0.013        60       1      12 [.      31      42 ..      31      46 .. 0.82
   2 ?   -0.6   1.0      0.18   8.3e+02       3       9 ..      63      69 ..      62      72 .. 0.82
   3 ?   10.9   0.0   4.6e-05      0.21       1      19 [.     201     219 ..     201     221 .. 0.94

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.013
  PF07557.6  1 vgRpsRRaakkV 12
               ++R +RRaa  V
  MMETSP1325-20131115|258_1 31 TPRARRRAAQGV 42
               69******9877 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.18
  PF07557.6  3 RpsRRaa 9 
                p+RRaa
  MMETSP1325-20131115|258_1 63 SPRRRAA 69
               5999998 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 4.6e-05
  PF07557.6   1 vgRpsRRaakkVsYaEPsL 19 
                ++R+sRRa+   s aEP+L
  MMETSP1325-20131115|258_1 201 STRTSRRASDGLSFAEPNL 219
                68****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       890  (0.0650965); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.79u 0.33s 00:00:01.12 Elapsed: 00:00:00.82
# Mc/sec: 1177.72
//
Query:       MMETSP1325-20131115|272_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|275_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.6   0.6       0.13   12.3   0.4    1.2  1  PF07941.6 Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   9.8e-06      0.13      35      63 ..      33      62 ..      28      70 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 9.8e-06
               TSSTTXXXHHHHSSXSXXXX.XXXXXXXXX CS
  PF07941.6 35 hsraaaaaavaaataaveGe.GGsGGGagv 63
                sr+ a+ a+ +++aa +G+ GGsGG  + 
  MMETSP1325-20131115|275_1 33 SSRSYATNAADTTSAANDGQdGGSGGELHA 62
               589999999998999999973666776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.70
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|273_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.68
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|277_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.027   14.4   6.7      0.027   14.4   4.6    2.0  2  PF12661.2 Human growth factor-like EGF
      0.073   13.1   2.5       0.14   12.1   1.8    1.5  1  PF07974.8 EGF-like domain
      0.092   12.6   2.5       0.15   11.9   1.7    1.3  1  PF04863.8 Alliinase EGF-like domain


Domain annotation for each model (and alignments):
>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   4.6   5.8e-06     0.027       2      13 .]      19      30 ..      18      30 .. 0.98
   2 ?   -1.0   0.1      0.48   2.2e+03       4       7 ..      35      38 ..      34      38 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5.8e-06
  PF12661.2  2 CqCppGyTGdnC 13
               C C+pGy G++C
  MMETSP1325-20131115|277_1 19 CKCDPGYNGPDC 30
               ************ PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.48
  PF12661.2  4 CppG 7 
               Cp G
  MMETSP1325-20131115|277_1 35 CPVG 38
               9987 PP

>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.8   3.2e-05      0.14      21      32 .]      19      30 ..      14      30 .. 0.95

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.2e-05
  PF07974.8 21 CvCdsgyqGktC 32
               C+Cd gy G++C
  MMETSP1325-20131115|277_1 19 CKCDPGYNGPDC 30
               ************ PP

>> PF04863.8  Alliinase EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.7   3.4e-05      0.15      37      52 ..      18      33 ..      11      35 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.4e-05
  PF04863.8 37 iCEcnnCysGsdCsvk 52
                C c+  y+G+dCs +
  MMETSP1325-20131115|277_1 18 GCKCDPGYNGPDCSNR 33
               6*************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.85
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|271_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.66
# Mc/sec: 893.19
//
Query:       MMETSP1325-20131115|276_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   11.7   0.5       0.15   11.1   0.3    1.2  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal
        0.1   11.8   0.2        0.1   11.8   0.2    1.4  2  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   2.2e-05      0.15     222     252 ..     164     190 ..     142     203 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.2e-05
                 -XXXXXXXXXXXXXXXXXXXX........XX CS
  PF01213.14 222 laavsasktaaPppPpppppPsvdtikdsve 252
                 +++ +  +    ppPpppppP+++ ++++ e
   MMETSP1325-20131115|276_1 164 VTTREGMG----PPPPPPPPPHSPSVEEAIE 190
                 33333333....4444444454444444433 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1      0.81   5.6e+03     124     136 ..      10      22 ..       4      28 .. 0.72
   2 ?   11.8   0.2   1.5e-05       0.1     188     205 ..     167     187 ..     120     196 .. 0.69

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 0.81
  PF05308.6 124 isaLedELaaLRa 136
                ++aLed L+++ a
  MMETSP1325-20131115|276_1  10 MAALEDKLSRIDA 22 
                5889999988755 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 1.5e-05
  PF05308.6 188 vp...pppppPpPlpavslqq 205
                ++   pppppPpP+ ++s+++
  MMETSP1325-20131115|276_1 167 REgmgPPPPPPPPPHSPSVEE 187
                224447777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.55
# Mc/sec: 1124.11
//
Query:       MMETSP1325-20131115|279_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.59    8.9   3.9       0.77    8.5   2.7    1.1  1  PF06529.6 Vertebrate interleukin-3 regulated transcription factor


Domain annotation for each model (and alignments):
>> PF06529.6  Vertebrate interleukin-3 regulated transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.7   5.6e-05      0.77     147     214 ..      78     145 ..      59     158 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 5.6e-05
  PF06529.6 147 eadegvvgkssdgedeqqvpkgpihspvelkrvhatvvkvpevnss.alphklrikakamqvkvealds 214
                +a   vv k + g     v   p+++    k+v ++v k p v+ + a+ +   +kaka++vk ea+  
  MMETSP1325-20131115|279_1  78 KAPVDVVPKRTRGRGPAPVGGAPVKAK-RAKKVPTAVKKAPAVKKApAVAKAKVVKAKAVKVKSEAVRR 145
                455567778888888877887888765.5678999999*****876266666678***********865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       580  (0.0424225); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.64
# Mc/sec: 677.72
//
Query:       MMETSP1325-20131115|278_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-21   74.0   1.2    8.2e-21   74.0   0.8    1.8  2  PF04930.10 FUN14 family
      0.002   16.8   0.2     0.0045   15.6   0.0    1.6  2  PF00152.15 tRNA synthetases class II (D, K and N)
     0.0064   16.4   0.0      0.016   15.2   0.0    1.6  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
       0.02   13.0   0.1      0.027   12.5   0.1    1.1  1  PF06011.7  Transient receptor potential (TRP) ion channel
      0.041   12.2   0.0      0.047   12.0   0.0    1.1  1  PF10443.4  RNA12 protein
      0.083   12.4   0.0       0.18   11.3   0.0    1.5  1  PF13833.1  EF-hand domain pair
      0.097   11.9   0.5       0.34   10.2   0.0    2.1  2  PF00036.27 EF hand
       0.12   11.6   0.0       0.28   10.5   0.0    1.7  1  PF13202.1  EF hand
       0.16   11.5   1.7       0.32   10.5   0.2    2.1  2  PF04210.8  Tetrahydromethanopterin S-methyltransferase, subunit G
        2.7    7.7   5.1        2.7    7.7   0.2    2.5  2  PF14141.1  YqzM-like protein


Domain annotation for each model (and alignments):
>> PF04930.10  FUN14 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       1.6   2.2e+03      72      80 ..      84      92 ..      59     121 .. 0.56
   2 !   74.0   0.8     6e-24   8.2e-21       1     100 []     128     228 ..     128     228 .. 0.96

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 1.6
  PF04930.10 72 tllkkaedl 80
                +l kk+e++
   MMETSP1325-20131115|278_1 84 DLEKKLEEA 92
                222222222 PP

  == domain 2    score: 74.0 bits;  conditional E-value: 6e-24
  PF04930.10   1 qlgiGalsGlvtGyalkkvgklaaiavGggilllqilaqkGlikinwkklekkvdkvaekve.adkaekevdtllkkaedllkkniiflaaFlaGfllGfa 100
                 q+++G +sG+++G+a+kk+gk+aai +Gg++l+lq la++G+i ++  k+ek v+++ ++    + ++++++  ++++ dll+  ++  ++F+aG++ G++
   MMETSP1325-20131115|278_1 128 QVSFGFISGFCAGFAAKKAGKVAAIGFGGVFLFLQALASTGYIDVDYGKVEKVVTETLDRNHdGKLDQEDAKVAFQELADLLQFGMPSGGGFAAGLAAGLR 228
                 899***************************************************99998888678889999999*************************86 PP

>> PF00152.15  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.81   1.1e+03     177     190 ..      79      92 ..      61     140 .. 0.46
   2 !   15.6   0.0   3.3e-06    0.0045     275     311 ..     187     223 ..     176     224 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.81
                 HHTS---------E CS
                 xxxxxxxxxxxxxx RF
  PF00152.15 177 gsdkpdlrfelelk 190
                 ++   dl+++le  
   MMETSP1325-20131115|278_1  79 KKRMEDLEKKLEEA 92 
                 22222232222111 PP

  == domain 2    score: 15.6 bits;  conditional E-value: 3.3e-06
                 HHHH----CCCHHHHCHHHHHCCT-----EE-EEE-E CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00152.15 275 rfeeqgldeeeaeekfgfllealkyGapphgGialGl 311
                 r ++ +ld+e a+  f++l ++l++G+p  gG+a Gl
   MMETSP1325-20131115|278_1 187 RNHDGKLDQEDAKVAFQELADLLQFGMPSGGGFAAGL 223
                 5566788999**************************7 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.1e-05     0.016       7      29 ..     183     205 ..     176     214 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.1e-05
  PF13499.1   7 kllDkdgdgyldkeeLlrllkhl 29 
                ++lD+++dg+ld+e+ + +++ l
  MMETSP1325-20131115|278_1 183 ETLDRNHDGKLDQEDAKVAFQEL 205
                68***************999986 PP

>> PF06011.7  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1     2e-05     0.027     160     207 ..     131     177 ..     123     185 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2e-05
  PF06011.7 160 salaaiysssstaahiel.rqvaanvldlfqyfQfvaltGmlsvnyPpf 207
                 ++++ +++   aa+ ++ + +a +++++f ++Q++a tG ++v+y ++
  MMETSP1325-20131115|278_1 131 FGFISGFCAG-FAAK-KAgKVAAIGFGGVFLFLQALASTGYIDVDYGKV 177
                4566666633.4444.455889***********************9776 PP

>> PF10443.4  RNA12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.5e-05     0.047     237     296 ..      66     125 ..      37     170 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.5e-05
  PF10443.4 237 edeeeseeqkkkdkaasa........ekdlkeldealekLGGRltDLealvrrlksgespkeAveeii 296
                e++++++e+        +        ek+l+e +++  k+GG+ +D e +    k+g+++++Ave  +
  MMETSP1325-20131115|278_1  66 EAKKKHDEEMA------LakkrmedlEKKLEEAASSAIKIGGKQVDVEDIR--YKIGKTINDAVETGV 125
                12222222221......122334455889999999999**********985..5679******98755 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00013      0.18      34      53 ..     185     204 ..     181     205 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00013
  PF13833.1  34 fDtdgdGkisfeEFcvller 53 
                +D+++dGk+++e+ +v++++
  MMETSP1325-20131115|278_1 185 LDRNHDGKLDQEDAKVAFQE 204
                8************9999886 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.7   2.4e+03      14      20 ..     167     173 ..     166     174 .. 0.82
   2 ?   10.2   0.0   0.00025      0.34       9      27 ..     185     203 ..     183     209 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.7
                 SSEBEHH CS
  PF00036.27  14 dGkIsfe 20 
                 +G+I+++
   MMETSP1325-20131115|278_1 167 TGYIDVD 173
                 69**987 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00025
                 HCTTTSSEBEHHHHHHHHH CS
  PF00036.27   9 fDkDgdGkIsfeEfkealk 27 
                 +D+++dGk++ e+ k a++
   MMETSP1325-20131115|278_1 185 LDRNHDGKLDQEDAKVAFQ 203
                 8**********99777765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0    0.0002      0.28       8      20 ..     185     197 ..     183     206 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0002
                H--S----B-HHH CS
  PF13202.1   8 fDlNgDGkIsreE 20 
                +D N DGk++ e+
  MMETSP1325-20131115|278_1 185 LDRNHDGKLDQED 197
                7*********986 PP

>> PF04210.8  Tetrahydromethanopterin S-methyltransferase, subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.2   0.00023      0.32      12      43 ..      73     104 ..      67     117 .. 0.87
   2 ?   -1.2   0.0       1.1   1.4e+03       4      30 ..     177     202 ..     174     211 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00023
  PF04210.8  12 ddfnevkkRLDeieekvefvngEvaqriGkkv 43 
                +++  +kkR++++e+k+e   +  ++  Gk+v
  MMETSP1325-20131115|278_1  73 EEMALAKKRMEDLEKKLEEAASSAIKIGGKQV 104
                6778899***************9999999998 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 1.1
  PF04210.8   4 vPkvlveeddfnevkkRLDeieekvef 30 
                v kv+ e  d n    +LD+ + kv f
  MMETSP1325-20131115|278_1 177 VEKVVTETLDRN-HDGKLDQEDAKVAF 202
                555555555533.35567887777776 PP

>> PF14141.1  YqzM-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.2     0.002       2.7      11      27 ..     117     133 ..     108     142 .. 0.89
   2 ?    1.1   0.5      0.22     3e+02      17      28 ..     150     161 ..     149     167 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.002
  PF14141.1  11 rNDaiDSgvGFivsFgf 27 
                 NDa++ gv   vsFgf
  MMETSP1325-20131115|278_1 117 INDAVETGVPSQVSFGF 133
                5***************9 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.22
  PF14141.1  17 SgvGFivsFgfF 28 
                +++GF+ +F+f 
  MMETSP1325-20131115|278_1 150 AAIGFGGVFLFL 161
                689******996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1023  (0.0748245); expected 273.4 (0.02)
Passed bias filter:                      750  (0.0548566); expected 273.4 (0.02)
Passed Vit filter:                       111  (0.00811878); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.64u 0.39s 00:00:01.03 Elapsed: 00:00:00.81
# Mc/sec: 680.45
//
Query:       MMETSP1325-20131115|280_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.74
# Mc/sec: 427.46
//
Query:       MMETSP1325-20131115|281_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.71
# Mc/sec: 371.27
//
Query:       MMETSP1325-20131115|282_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-55  184.5   0.0    1.8e-12   46.4   0.0    5.3  5  PF13475.1 Domain of unknown function (DUF4116)
     0.0071   15.9   0.3         27    4.4   0.0    4.0  4  PF07444.6 Ycf66 protein N-terminus
  ------ inclusion threshold ------
      0.018   14.5   0.2        4.8    6.7   0.0    2.5  2  PF10784.4 Plasmid stability protein
       0.05   13.1   0.0         32    4.2   0.0    4.0  5  PF07892.6 Protein of unknown function (DUF1667)


Domain annotation for each model (and alignments):
>> PF13475.1  Domain of unknown function (DUF4116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.0   5.2e-16   1.8e-12       5      49 .]      39      83 ..      38      83 .. 0.97
   2 !   43.3   0.0   4.8e-15   1.6e-11       1      49 []      85     135 ..      85     135 .. 0.95
   3 !   40.3   0.0   4.1e-14   1.4e-10       1      49 []     137     185 ..     137     185 .. 0.97
   4 !   34.8   0.0   2.2e-12   7.5e-09       1      42 [.     187     228 ..     187     232 .. 0.94
   5 !   27.9   0.0     3e-10     1e-06       1      44 [.     212     256 ..     212     260 .. 0.93

  Alignments for each domain:
  == domain 1    score: 46.4 bits;  conditional E-value: 5.2e-16
  PF13475.1  5 vleavkkngsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49
               vl+avk++g alky+seeL+ D+e+v++Av  +g a+  a +eL+
  MMETSP1325-20131115|282_1 39 VLKAVKQDGHALKYASEELQGDREVVMRAVTTHGLAIQWAQPELK 83
               89************************************9999997 PP

  == domain 2    score: 43.3 bits;  conditional E-value: 4.8e-15
  PF13475.1   1 DrEivleavkkn..gsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49 
                Dr++vl a++k   +++ +y+seeLk+Dk+++++Av+q+g++l  a ++Lr
  MMETSP1325-20131115|282_1  85 DRDVVLTAITKGraPWSVRYASEELKRDKDVMMAAVQQDGECLVEAAPDLR 135
                9*********9999****************************988888886 PP

  == domain 3    score: 40.3 bits;  conditional E-value: 4.1e-14
  PF13475.1   1 DrEivleavkkngsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49 
                D+ +v++a+ ++g al+++seeL+ D+ iv+ Av ++g+al++a +eLr
  MMETSP1325-20131115|282_1 137 DKAFVEAALATDGDALRHCSEELRADRAIVMCAVTSSGKALEHAAPELR 185
                7789*******************************************98 PP

  == domain 4    score: 34.8 bits;  conditional E-value: 2.2e-12
  PF13475.1   1 DrEivleavkkngsalkylseeLknDkeivlkAvkqngsals 42 
                Dr +v+ av++ g al+++s+ L++Dk+iv +Av qng +l+
  MMETSP1325-20131115|282_1 187 DRGVVMRAVTTTGQALRFASPDLRKDKDIVTAAVMQNGLSLR 228
                8889**********************************9986 PP

  == domain 5    score: 27.9 bits;  conditional E-value: 3e-10
  PF13475.1   1 DrEivleavkkngsalkyl.seeLknDkeivlkAvkqngsalsya 44 
                D++iv++av +ng +l+ +  ++L +D ++vlkA+ q+ +alsya
  MMETSP1325-20131115|282_1 212 DKDIVTAAVMQNGLSLRWAfQPRLAKDTDLVLKAMAQDANALSYA 256
                9*****************6578**********************8 PP

>> PF07444.6  Ycf66 protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.067   2.3e+02      24      43 ..      74      93 ..      62      95 .. 0.83
   2 ?    2.4   0.0     0.033   1.1e+02      23      43 ..     100     120 ..      92     122 .. 0.86
   3 !    4.4   0.0     0.008        27      23      43 ..     200     220 ..     188     226 .. 0.81
   4 ?    2.4   0.0     0.033   1.1e+02      26      44 ..     229     247 ..     217     250 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.067
  PF07444.6 24 llrtvkPevsrdeDifFasi 43
               +++ ++Pe+  d+D++ ++i
  MMETSP1325-20131115|282_1 74 AIQWAQPELKDDRDVVLTAI 93
               57889***********9988 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.033
  PF07444.6  23 yllrtvkPevsrdeDifFasi 43 
                + +r +  e+ rd+D++ a++
  MMETSP1325-20131115|282_1 100 WSVRYASEELKRDKDVMMAAV 120
                67899999**********997 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.008
  PF07444.6  23 yllrtvkPevsrdeDifFasi 43 
                 +lr++ P++ +d+Di+ a++
  MMETSP1325-20131115|282_1 200 QALRFASPDLRKDKDIVTAAV 220
                579*************99987 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.033
  PF07444.6  26 rtvkPevsrdeDifFasig 44 
                 +++P++++d+D++  +++
  MMETSP1325-20131115|282_1 229 WAFQPRLAKDTDLVLKAMA 247
                4689*********998885 PP

>> PF10784.4  Plasmid stability protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0014       4.8      11      50 ..      42      81 ..      40      94 .. 0.91
   2 ?    5.1   0.0    0.0044        15      25      45 ..     183     203 ..     166     209 .. 0.78

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0014
  PF10784.4 11 avkadkralatldslpqkeRgrllRaaliaGlaLhkldpr 50
               avk+d  al++ ++  q  R  ++Ra  + Gla+    p+
  MMETSP1325-20131115|282_1 42 AVKQDGHALKYASEELQGDREVVMRAVTTHGLAIQWAQPE 81
               579******************************8766665 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0044
  PF10784.4  25 lpqkeRgrllRaaliaGlaLh 45 
                  ++ Rg ++Ra  ++G aL 
  MMETSP1325-20131115|282_1 183 ELRSDRGVVMRAVTTTGQALR 203
                5578899***********995 PP

>> PF07892.6  Protein of unknown function (DUF1667)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.08   2.7e+02       4      26 ..      50      72 ..      48      77 .. 0.86
   2 ?    0.7   0.0      0.11   3.8e+02       4      22 ..      75      93 ..      72      98 .. 0.89
   3 ?    4.2   0.0    0.0093        32       4      27 ..     102     125 ..      99     132 .. 0.87
   4 ?   -1.5   0.0      0.53   1.8e+03       4      31 ..     177     204 ..     173     218 .. 0.69
   5 ?    0.4   0.0      0.14   4.7e+02       4      26 ..     202     224 ..     198     229 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.08
  PF07892.6  4 eeYakkeltnpkriltstVkveg 26
                +Ya +el+  + +++  V ++g
  MMETSP1325-20131115|282_1 50 LKYASEELQGDREVVMRAVTTHG 72
               68**************9998876 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.11
  PF07892.6  4 eeYakkeltnpkriltstV 22
               +++a+ el++ ++++ + +
  MMETSP1325-20131115|282_1 75 IQWAQPELKDDRDVVLTAI 93
               68*************9987 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.0093
  PF07892.6   4 eeYakkeltnpkriltstVkvegg 27 
                  Ya +el+  k+++++ V+ +g+
  MMETSP1325-20131115|282_1 102 VRYASEELKRDKDVMMAAVQQDGE 125
                68*****************97765 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 0.53
  PF07892.6   4 eeYakkeltnpkriltstVkveggelpl 31 
                 e a  el + + +++  V ++g+ l +
  MMETSP1325-20131115|282_1 177 LEHAAPELRSDRGVVMRAVTTTGQALRF 204
                5677777777777787777777766655 PP

  == domain 5    score: 0.4 bits;  conditional E-value: 0.14
  PF07892.6   4 eeYakkeltnpkriltstVkveg 26 
                  +a  +l + k+i+t+ V+ +g
  MMETSP1325-20131115|282_1 202 LRFASPDLRKDKDIVTAAVMQNG 224
                5799999**********998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.66
# Mc/sec: 1448.71
//
Query:       MMETSP1325-20131115|285_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 263.60
//
Query:       MMETSP1325-20131115|283_1  [L=339]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.6    8.1   5.3        6.4    6.2   1.7    2.2  2  PF04156.9 IncA protein


Domain annotation for each model (and alignments):
>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   1.7   0.00047       6.4      13      71 ..       3      62 ..       1      96 [. 0.86
   2 ?    2.6   0.0    0.0056        77      44      65 ..     266     287 ..     263     294 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.00047
  PF04156.9 13 ilgll.liasGiallvlfasslgvlisallgivliAlgvvLlalgllllllkapvqseed 71
               i gl+ +i+  +++ +l+++   ++++a++ ++++ + +v   lg+++++++ap+    +
  MMETSP1325-20131115|283_1  3 IQGLVaVILWLVTAVILGSFLAHPTVTAFVRVGILGIIFVWTPLGIAYAFATAPSDAAAQ 62
               557887888888888888888999**************************9999766554 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.0056
  PF04156.9  44 vliAlgvvLlalgllllllkap 65 
                +++Algvv lalg+ +  +++ 
  MMETSP1325-20131115|283_1 266 AAVALGVVALALGTQCRDRYPL 287
                6899999999999988766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       599  (0.0438122); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.73
# Mc/sec: 1112.83
//
Query:       MMETSP1325-20131115|286_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        66  (0.00482738); expected 273.4 (0.02)
Passed bias filter:                       64  (0.0046811); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.30s 00:00:00.62 Elapsed: 00:00:00.56
# Mc/sec: 214.41
//
Query:       MMETSP1325-20131115|284_1  [L=548]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-12   44.6  25.8    9.9e-06   25.0   2.1    6.0  6  PF01839.18 FG-GAP repeat
    4.7e-09   36.3  14.3     0.0076   16.4   2.0    4.2  3  PF13517.1  Family description
     0.0059   15.9   0.9       0.19   11.0   0.1    2.5  2  PF12256.3  Insecticide toxin TcdB middle/N-terminal region


Domain annotation for each model (and alignments):
>> PF01839.18  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   1.2     0.019        86      11      29 ..      86     103 ..      86     112 .. 0.77
   2 !   25.0   2.1   2.2e-09   9.9e-06       1      33 [.     134     176 ..     134     177 .. 0.72
   3 !   23.2   0.1   7.8e-09   3.5e-05       1      33 [.     214     253 ..     214     254 .. 0.74
   4 ?   -0.5   0.0      0.21   9.8e+02      15      26 ..     271     283 ..     270     295 .. 0.57
   5 ?   -2.6   0.1      0.99   4.5e+03      18      33 ..     302     323 ..     302     324 .. 0.54
   6 !    5.8   0.0    0.0023        11       7      21 ..     442     456 ..     437     480 .. 0.81

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.019
                 T---S-EEEEETEECTCE- CS
  PF01839.18  11 nGDGrpDlavGpmggghnG 29 
                 +GD  +D+++G ++g+++G
   MMETSP1325-20131115|284_1  86 DGDDSNDIVIG-SPGWDAG 103
                 89********8.5555554 PP

  == domain 2    score: 25.0 bits;  conditional E-value: 2.2e-09
                 ECECEEEE-TT---S-EEEEE.T.........EECTCE--EEE CS
  PF01839.18   1 fgnsvavgDfnGDGrpDlavG.p.........mggghnGavyv 33 
                 fg+svav D++ DG++Dl+vG p           g++ G vyv
   MMETSP1325-20131115|284_1 134 FGASVAVLDMDLDGHADLVVGaPnagrknvtaVVGNYTGLVYV 176
                 8*******************87434455555444444466666 PP

  == domain 3    score: 23.2 bits;  conditional E-value: 7.8e-09
                 ECECEEEE-TT---S-EEEEE.T..EECTCE....--EEE CS
  PF01839.18   1 fgnsvavgDfnGDGrpDlavG.p..mggghn....Gavyv 33 
                 fg+s++++D +GDG+ Dl+v  p  ++ +++    G+++v
   MMETSP1325-20131115|284_1 214 FGTSLTTADCDGDGHLDLLVSsPyaGNASDAiksqGRLHV 253
                 9*******************87336444444444466666 PP

  == domain 4    score: -0.5 bits;  conditional E-value: 0.21
                 S-EEEEE.TEECT CS
  PF01839.18  15 rpDlavG.pmggg 26 
                 ++Dl++G   +++
   MMETSP1325-20131115|284_1 271 FADLVAGsARNFE 283
                 6788887323333 PP

  == domain 5    score: -2.6 bits;  conditional E-value: 0.99
                 EEEE.T...EECTCE..--EEE CS
  PF01839.18  18 lavG.p...mggghn..Gavyv 33 
                 lavG p    + + +  G+vy 
   MMETSP1325-20131115|284_1 302 LAVGaPishVDEDAGavGRVYG 323
                 5777654454444445668875 PP

  == domain 6    score: 5.8 bits;  conditional E-value: 0.0023
                 EE-TT---S-EEEEE CS
  PF01839.18   7 vgDfnGDGrpDlavG 21 
                  +D++ DG ++l++ 
   MMETSP1325-20131115|284_1 442 FADMDQDGSDELIAS 456
                 69**********995 PP

>> PF13517.1  Family description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   2.0   1.7e-06    0.0076       3      61 .]      86     153 ..      85     153 .. 0.64
   2 !   16.4   0.6   1.7e-06    0.0077      40      61 .]     205     233 ..     161     260 .. 0.69
   3 !    8.8   0.1    0.0004       1.8      43      60 ..     437     454 ..     412     455 .. 0.79

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.7e-06
  PF13517.1   3 dgDGdlDlvvagdgg...........lrlylnngdGtftdvaetslgaggggtgvafgDldgDGdlDllv 61 
                dgD   D+v++++g            +++ + +g   +++ ++++l +++ g++va+ D+d DG++Dl+v
  MMETSP1325-20131115|284_1  86 DGDDSNDIVIGSPGWdagvgapmtgkVEIRFATGGSAVVE-GDPAL-SSNFGASVAVLDMDLDGHADLVV 153
                899999****964333344444443355555554333333.33334.4466789**************98 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 1.7e-06
  PF13517.1  40 g.......gggtgvafgDldgDGdlDllv 61 
                        + gt+++ +D dgDG+lDllv
  MMETSP1325-20131115|284_1 205 VeggmtwgSFGTSLTTADCDGDGHLDLLV 233
                03334433555679999999999999987 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.0004
  PF13517.1  43 gtgvafgDldgDGdlDll 60 
                g+ + f+D+d DG ++l+
  MMETSP1325-20131115|284_1 437 GWKMEFADMDQDGSDELI 454
                5789**********9998 PP

>> PF12256.3  Insecticide toxin TcdB middle/N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.014        65      24      50 ..     135     161 ..     118     176 .. 0.75
   2 !   11.0   0.1   4.2e-05      0.19      21      47 ..     213     238 ..     204     259 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.014
  PF12256.3  24 tcqlslaDinGdGladlvlsvphikek 50 
                  +++++D++ dG adlv+  p  ++k
  MMETSP1325-20131115|284_1 135 GASVAVLDMDLDGHADLVVGAPNAGRK 161
                46799**************66655454 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 4.2e-05
  PF12256.3  21 rydtcqlslaDinGdGladlvlsvphi 47 
                ++  ++l++aD +GdG +dl++s+p  
  MMETSP1325-20131115|284_1 213 SFG-TSLTTADCDGDGHLDLLVSSPYA 238
                333.79****************66654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.35s 00:00:01.16 Elapsed: 00:00:00.98
# Mc/sec: 1340.00
//
Query:       MMETSP1325-20131115|293_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   12.6   0.0      0.095   12.5   0.0    1.1  1  PF09276.5 Pertussis toxin S5 subunit


Domain annotation for each model (and alignments):
>> PF09276.5  Pertussis toxin S5 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.9e-06     0.095      35      69 ..      17      50 ..       9      54 .] 0.87

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.9e-06
               EEEEEEE----TT-CHHHHH---HHHHHHHT--EE CS
  PF09276.5 35 lvraclsdaererdtwfdtmlgfaisayalksria 69
                 rac s   r+r  w++  + +ai   al   i 
  MMETSP1325-20131115|293_1 17 YTRACCSHPLRQRAHWYEIHFNLAIQELALEQ-IV 50
               579************************99975.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.33s 00:00:00.63 Elapsed: 00:00:00.76
# Mc/sec: 170.27
//
Query:       MMETSP1325-20131115|292_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-49  165.6   3.3    6.4e-49  165.3   2.3    1.1  1  PF01201.17 Ribosomal protein S8e


Domain annotation for each model (and alignments):
>> PF01201.17  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.3   2.3   4.7e-53   6.4e-49       1     132 []      25     213 ..      25     213 .. 0.95

  Alignments for each domain:
  == domain 1    score: 165.3 bits;  conditional E-value: 4.7e-53
                 XXXXXXGGGSXXXXXXXXXXXSXXXGGGXXXXXXXXEES.HHH.CCCCCCT----EEEECCCC-EEEEEETTTTEEEEEEEEEESSSSSTCHHHCTT---TT-EEEEESH............---................................................EEEE-S-------B-EEB- CS
  PF01201.17   1 MginrdiehkrkktGgrldheekkrkkelgrpaaetklgkvlskrvkqvrvrggnrkvralrlkkanvthpeekvtrklrIidVkknpssneyvrtgvltKgaiievdvs............elg................................................larivsrpGqdGrvdgvvl 132
                 Mgi rd+ehkr++tGg++   +kkrk+++grpaa+tk+g+   krv++vr+rggn k+ra+rl+++n+++++e  t ++r++dV++n+s+ne+vrt++l+Kgaii +d+s            e+g                                                la+i+srpGq+Grvdg+vl
   MMETSP1325-20131115|292_1  25 MGIGRDKEHKRRATGGKRISIRKKRKYNMGRPAAMTKIGE---KRVHTVRCRGGNLKYRAMRLDTGNFSWGSEVHTSRARVLDVVYNASNNELVRTKTLVKGAIILIDASpyktwyqnhygvEIGkkknakakapadadeakkshhvlrkiknrqatrtldqrlddqfaggrlLACITSRPGQTGRVDGYVL 213
                 9**************************************8...9******************************************************************66666666555544499999999*********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       526  (0.0384728); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.65
# Mc/sec: 855.32
//
Query:       MMETSP1325-20131115|295_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.048   13.6   0.0      0.092   12.7   0.0    1.5  1  PF07523.7  Bacterial Ig-like domain (group 3)
      0.063   13.4   0.3        8.5    6.6   0.1    2.3  2  PF13754.1  Bacterial Ig-like domain (group 3)
        0.1   12.3   0.9         11    5.8   0.2    2.2  2  PF02369.11 Bacterial Ig-like domain (group 1)


Domain annotation for each model (and alignments):
>> PF07523.7  Bacterial Ig-like domain (group 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     2e-05     0.092      29      58 ..      34      66 ..      24      76 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2e-05
  PF07523.7 29 ea...vdfddvtvsgtvdttkaGeyevtytykg 58
               ++   ++ +  +++ + d++ +G y+vt++  +
  MMETSP1325-20131115|295_1 34 QTpkiISSEGMEFTVNPDSQNPGHYTVTLKTSE 66
               44455888899999999************9876 PP

>> PF13754.1  Bacterial Ig-like domain (group 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1    0.0019       8.5      14      31 ..      46      63 ..      38      66 .. 0.82
   2 ?    5.7   0.0    0.0037        17       6      29 ..      64      87 ..      61      92 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0019
  PF13754.1 14 WsvtvpaladGtytvtvt 31
                +v++++ + G ytvt +
  MMETSP1325-20131115|295_1 46 FTVNPDSQNPGHYTVTLK 63
               688999999999999976 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0037
  PF13754.1  6 ttadadGtWsvtvpaladGtytvt 29
               t+  + G++s+t+     G+++vt
  MMETSP1325-20131115|295_1 64 TSEIEAGNYSATLMGKRSGVHSVT 87
               666788*******9999****998 PP

>> PF02369.11  Bacterial Ig-like domain (group 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0027        12      69      89 ..      45      65 ..      11      69 .. 0.67
   2 ?    5.8   0.2    0.0025        11      67      86 ..      69      88 ..      64     103 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0027
  PF02369.11 69 katvtltstkaGkatVtasle 89
                 +tv   s+ +G +tVt +++
   MMETSP1325-20131115|295_1 45 EFTVNPDSQNPGHYTVTLKTS 65
                588999999999***999987 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0025
  PF02369.11 67 nGkatvtltstkaGkatVta 86
                 G++++tl ++++G++ Vt 
   MMETSP1325-20131115|295_1 69 AGNYSATLMGKRSGVHSVTG 88
                69****************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.69
# Mc/sec: 364.66
//
Query:       MMETSP1325-20131115|294_1  [L=319]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00099   18.7   1.5    0.00099   18.7   1.0    2.2  2  PF07716.10 Basic region leucine zipper
     0.0015   18.3   3.7     0.0015   18.3   2.6    2.1  2  PF00170.16 bZIP transcription factor
     0.0034   17.3  11.1      0.044   13.8   2.3    2.6  2  PF13747.1  Domain of unknown function (DUF4164)
  ------ inclusion threshold ------
      0.025   14.6   1.2        4.7    7.4   0.2    2.5  2  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.07   12.4   6.4      0.092   12.1   1.1    2.6  2  PF04977.10 Septum formation initiator
       0.16   10.4  10.4       0.21   10.0   1.9    2.1  2  PF08317.6  Spc7 kinetochore protein
       0.21   11.1   4.9        2.2    7.8   0.2    2.5  2  PF02996.12 Prefoldin subunit
       0.23   11.1   7.4      0.059   13.0   1.8    2.2  2  PF05812.7  Herpesvirus BLRF2 protein
       0.35   10.5   2.5          3    7.5   0.1    3.3  4  PF12840.2  Helix-turn-helix domain
       0.84    9.8   9.2       0.11   12.6   2.5    2.3  2  PF06005.7  Protein of unknown function (DUF904)
        1.2    9.2  11.9        3.9    7.5   3.0    2.7  2  PF05837.7  Centromere protein H (CENP-H)
        1.5    8.7   7.9        5.7    6.8   1.2    2.4  2  PF05103.8  DivIVA protein
        6.2    6.5  12.1        4.3    7.0   2.6    2.7  2  PF09744.4  JNK_SAPK-associated protein-1
        7.5    6.4  13.3        2.3    8.0   0.0    3.2  3  PF03528.10 Rabaptin
          8    6.8  10.0         32    4.9   1.3    3.5  3  PF14357.1  Domain of unknown function (DUF4404)
        8.5    6.5   9.5        1.2    9.2   1.4    2.8  3  PF13864.1  Calmodulin-binding


Domain annotation for each model (and alignments):
>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   1.0   1.2e-06   0.00099      20      51 ..      92     123 ..      91     126 .. 0.94
   2 ?   -3.2   0.1         8   6.8e+03      28      44 ..     171     187 ..     168     188 .. 0.65

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1.2e-06
  PF07716.10  20 RekkkakeeeleervkeLeeeNaqLrqkveqL 51 
                 R++k+   +elee++ +L+eeN qL q +e++
   MMETSP1325-20131115|294_1  92 RKRKRTPVNELEEKLAKLQEENTQLSQHLESV 123
                 99*************************99986 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 8
  PF07716.10  28 eeleervkeLeeeNaqL 44 
                 e+ +++v +  ++ ++L
   MMETSP1325-20131115|294_1 171 EQRQQEVHFHLAQLERL 187
                 56677777666666655 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   2.6   1.7e-06    0.0015      21      52 ..      92     123 ..      80     138 .. 0.90
   2 ?   -2.1   0.2       3.9   3.3e+03      43      45 ..     249     251 ..     232     269 .. 0.43

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 1.7e-06
                 HHHHHHHHHHHHHHHHHHHHHH.......HHH CS
  PF00170.16  21 RqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                 R+RK+  + eLeek ++L++eN++L + le+ 
   MMETSP1325-20131115|294_1  92 RKRKRTPVNELEEKLAKLQEENTQLSQHLESV 123
                 99************************988865 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 3.9
                 ... CS
  PF00170.16  43 kaL 45 
                 ++L
   MMETSP1325-20131115|294_1 249 DDL 251
                 222 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   2.3   5.2e-05     0.044      28      74 ..      92     139 ..      79     145 .. 0.81
   2 !    8.2   0.2    0.0028       2.4      40      87 ..     233     283 ..     225     285 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.2e-05
  PF13747.1  28 leaerkr...deleaeiqaldadrsrLaqeLdkaearaerleeanrEvsr 74 
                ++++  r   +ele+++++l+++  +L q L ++  r+e++ +  rE + 
  MMETSP1325-20131115|294_1  92 RKRK--RtpvNELEEKLAKLQEENTQLSQHLESVSCREETIRNYKREMKL 139
                3334..24489***********************************9875 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0028
  PF13747.1  40 eiqaldadr...srLaqeLdkaearaerleeanrEvsrrLkaaietiravL 87 
                +i++l + r   +rL ++L  ++a +++l++  +E +r   + ++t+++ L
  MMETSP1325-20131115|294_1 233 QIAKLSEHRdkmNRLTDDLHRSLALLRKLKKSVDENQRVFADKMQTVQSAL 283
                66666666544589**********************************988 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.022        19      11      38 ..      97     124 ..      94     137 .. 0.80
   2 ?    7.4   0.2    0.0055       4.7      20      61 ..     227     279 ..     218     291 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.022
  PF05531.7  11 adikavddkVdalqqqvddvqenlpdvt 38 
                + ++++++k+  lq++ +++++ l+ v+
  MMETSP1325-20131115|294_1  97 TPVNELEEKLAKLQEENTQLSQHLESVS 124
                5688889999999999888888888776 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0055
  PF05531.7  20 VdalqqqvddvqenlpdvtelnekLdaqsaqLaelet...........kvenI 61 
                V   ++q+++++e   +++ l++ L +  a L +l++           k++++
  MMETSP1325-20131115|294_1 227 VGFTDSQIAKLSEHRDKMNRLTDDLHRSLALLRKLKKsvdenqrvfadKMQTV 279
                556688999999999999999999***99*****9994444444444455555 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.1   0.00011     0.092      25      62 ..      98     135 ..      91     141 .. 0.85
   2 ?    2.0   0.2      0.15   1.3e+02      30      58 ..     231     259 ..     221     270 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00011
  PF04977.10  25 eiaalqaelaklkaeneeLeaevkdLksdedyieeqAR 62 
                  +++l+++lakl++en++L + ++  +  e+ i+ + R
   MMETSP1325-20131115|294_1  98 PVNELEEKLAKLQEENTQLSQHLESVSCREETIRNYKR 135
                 5889*********************9779999998877 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.15
  PF04977.10  30 qaelaklkaeneeLeaevkdLksdedyie 58 
                   ++akl++ ++++ +  +dL+ + + ++
   MMETSP1325-20131115|294_1 231 DSQIAKLSEHRDKMNRLTDDLHRSLALLR 259
                 56778888888888877777765555444 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.9   0.00025      0.21     152     214 ..     100     162 ..      95     188 .. 0.83
   2 ?    5.2   0.6    0.0076       6.5     168     215 ..     230     280 ..     218     314 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00025
  PF08317.6 152 eeLeenleelkedeellnkklelinsilpklrekkealkeelasLrqlkdeleecdseelekl 214
                +eLee+l++l+e++++l+++le ++   + +r++k ++k ++ +L   ++ +e      l ++
  MMETSP1325-20131115|294_1 100 NELEEKLAKLQEENTQLSQHLESVSCREETIRNYKREMKLKMGKLLCNSESPETEIAAVLTQF 162
                689***************************************999776666555444445544 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0076
  PF08317.6 168 lnkklelinsilpklrekkealkeelasLrqlkde...leecdseeleklr 215
                 + +++++++  +k++ + + l++ la Lr+lk+     + +  ++++ ++
  MMETSP1325-20131115|294_1 230 TDSQIAKLSEHRDKMNRLTDDLHRSLALLRKLKKSvdeNQRVFADKMQTVQ 280
                455666677777777777777777777777666653323333334444444 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.4     0.023        20       1      32 [.     102     133 ..      96     149 .. 0.63
   2 ?    7.8   0.2    0.0026       2.2       2      43 ..     231     273 ..     230     284 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.023
                 HTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02996.12   1 lkeeleslqaeleqlkeaieelektletlktl 32 
                 l+e+l++lq+e +ql++ +e++   +et++++
   MMETSP1325-20131115|294_1 102 LEEKLAKLQEENTQLSQHLESVSCREETIRNY 133
                 34555555555555555555555555555555 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0026
                 TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT.--SS--B-E CS
  PF02996.12   2 keeleslqaeleqlkeaieelektletlktlkk.edegkevlv 43 
                 ++++++l + +++++   ++l ++l+ l++lkk  de++ v+ 
   MMETSP1325-20131115|294_1 231 DSQIAKLSEHRDKMNRLTDDLHRSLALLRKLKKsVDENQRVFA 273
                 689******************************7666665555 PP

>> PF05812.7  Herpesvirus BLRF2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.8     7e-05     0.059       4      47 ..      98     136 ..      95     150 .. 0.80
   2 ?   -0.3   0.1      0.92   7.8e+02      20      45 ..     259     287 ..     241     304 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7e-05
                CHHHHHHHHHHHHHHHHHHHHCHHH---..--TT--B--HHHHH CS
  PF05812.7   4 tveeLaaelakLklENkaLkkklksstgpkespkdevLtprqke 47 
                 v+eL+++lakL+ EN +L ++l+s +      ++e + + ++e
  MMETSP1325-20131115|294_1  98 PVNELEEKLAKLQEENTQLSQHLESVSC-----REETIRNYKRE 136
                589********************99884.....55555555555 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.92
                HHHHHCHHH---.....--TT--B--HHH CS
  PF05812.7  20 kaLkkklksstg...pkespkdevLtprq 45 
                ++Lkk + +++     k ++ ++ Ltp+q
  MMETSP1325-20131115|294_1 259 RKLKKSVDENQRvfaDKMQTVQSALTPKQ 287
                57777777777677666777778888887 PP

>> PF12840.2  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.64   5.4e+02      26      45 ..      98     120 ..      80     122 .. 0.58
   2 ?    7.5   0.1    0.0036         3      27      50 ..     152     186 ..     139     189 .. 0.74
   3 ?   -1.2   0.0       1.9   1.6e+03      15      33 ..     219     237 ..     218     251 .. 0.84
   4 ?   -1.5   0.0       2.3     2e+03      22      33 ..     280     291 ..     254     297 .. 0.74

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.64
                -HHHHHHHH...T--HHHHHHHH CS
  PF12840.2  26 taselaerl...dlpqstlsyHL 45 
                ++ el+e l   +    +ls+HL
  MMETSP1325-20131115|294_1  98 PVNELEEKLaklQEENTQLSQHL 120
                44555555532223333377776 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0036
                HHHHHHHHT...........--HHHHHHHHHHH.H CS
  PF12840.2  27 aselaerld...........lpqstlsyHLrvLee 50 
                 +e+a+ l+            +q+++++HL++Le+
  MMETSP1325-20131115|294_1 152 ETEIAAVLTqfrqlyehygeQRQQEVHFHLAQLER 186
                5677777744445555565689999********98 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 1.9
                HHHHH..H----HHHHHHH CS
  PF12840.2  15 ilraLareegltaselaer 33 
                +l+ L++e g+t s++a++
  MMETSP1325-20131115|294_1 219 LLSILTEEVGFTDSQIAKL 237
                6888999999999999986 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 2.3
                H----HHHHHHH CS
  PF12840.2  22 eegltaselaer 33 
                  +lt++++a++
  MMETSP1325-20131115|294_1 280 QSALTPKQIARL 291
                568899999987 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.5   0.00013      0.11      21      71 ..     100     164 ..      98     165 .. 0.82
   2 ?   -1.0   0.2       2.3     2e+03      30      55 ..     237     269 ..     231     281 .. 0.42

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00013
                HHHHHHHHHHHHHHHHHH..............HHHHHHHHHHHHHHHHH---TTHHHHH------ CS
  PF06005.7  21 alLqmeieeLkeeneqlk..............eeneeLeeenkklkeereawqerlralLgklee 71 
                  L++++++L+een+ql+              + ++e++ +  kl  + e+ ++ + a+L+++++
  MMETSP1325-20131115|294_1 100 NELEEKLAKLQEENTQLSqhlesvscreetirNYKREMKLKMGKLLCNSESPETEIAAVLTQFRQ 164
                57999999999999999988888888887777778888888888889999999999999988765 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 2.3
                HHHHHHHHHHHHHHHHHHHHHHH.......HHH CS
  PF06005.7  30 LkeeneqlkeeneeLeeenkklk.......eer 55 
                L e  +++++  + L +    l+       e++
  MMETSP1325-20131115|294_1 237 LSEHRDKMNRLTDDLHRSLALLRklkksvdENQ 269
                444444444333333333322222223323444 PP

>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.0    0.0045       3.9       2      65 ..     103     164 ..     102     204 .. 0.88
   2 ?    5.7   0.6     0.017        14      10      66 ..     225     282 ..     218     315 .. 0.66

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0045
  PF05837.7   2 sseilnlqqasretreeLsdvekerlqlkqknrelvrellelkkkkesdredeelkekleklea 65 
                 +++++lq++ ++++++L++v+++   + + +re+ +++ +l  ++es +   e+++ l + ++
  MMETSP1325-20131115|294_1 103 EEKLAKLQEENTQLSQHLESVSCREETIRNYKREMKLKMGKLLCNSESPET--EIAAVLTQFRQ 164
                67899*************************************999999988..67776666554 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.017
  PF05837.7  10 qasretreeLsdvekerlqlkqknrelvrellelkkkkesdre.deelkeklekleae 66 
                +++  t  ++ ++++ r ++++ + +l r+l  l k k+s +e +   + k++++++ 
  MMETSP1325-20131115|294_1 225 EEVGFTDSQIAKLSEHRDKMNRLTDDLHRSLALLRKLKKSVDEnQRVFADKMQTVQSA 282
                5666677777777777777777777777777777777777776322233444444443 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   1.2    0.0067       5.7      36      67 ..     101     132 ..      87     188 .. 0.61
   2 ?    5.3   0.3     0.021        18      39      93 ..     225     279 ..     220     315 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0067
  PF05103.8  36 allkeneelkeeieeleekleeykeleeslkk 67 
                +l ++ ++l+ee+++l + le+ + +ee++++
  MMETSP1325-20131115|294_1 101 ELEEKLAKLQEENTQLSQHLESVSCREETIRN 132
                34445555555555555555555555555544 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.021
  PF05103.8  39 keneelkeeieeleekleeykeleeslkkslvvaqetaeevkanakkeaeliike 93 
                +e+    ++i++l e  +++++l ++l++sl +  +  + v +n++  a+++++ 
  MMETSP1325-20131115|294_1 225 EEVGFTDSQIAKLSEHRDKMNRLTDDLHRSLALLRKLKKSVDENQRVFADKMQTV 279
                5666677899999999999999999999999999999999999998777766554 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   2.6    0.0051       4.3      84     144 ..      85     145 ..      75     152 .. 0.85
   2 ?    4.3   0.2     0.035        30     116     155 ..     231     269 ..     220     272 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0051
  PF09744.4  84 EdeleqekkelekkieeleeevrqlelkaknlsdkvsrLeeretelkkeyeslheretkll 144
                E  l + +k  ++ ++elee++ +l+ ++  ls++  +   re+ +++   +++ +  kll
  MMETSP1325-20131115|294_1  85 EARLAGGRKRKRTPVNELEEKLAKLQEENTQLSQHLESVSCREETIRNYKREMKLKMGKLL 145
                7778899999999******************************999998888877766666 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.035
  PF09744.4 116 sdkvsrLeeretelkkeyeslheretkllkeyveyverqk 155
                  ++ +L e+ +++ +  + lh r + ll++++  v+ ++
  MMETSP1325-20131115|294_1 231 DSQIAKLSEHRDKMNRLTDDLH-RSLALLRKLKKSVDENQ 269
                67999********999999998.8999******9999876 PP

>> PF03528.10  Rabaptin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   2.9     0.092        79      62     103 ..      95     138 ..      76     141 .. 0.72
   2 ?   -2.2   2.0       4.1   3.5e+03      41      65 ..     152     177 ..     126     195 .. 0.51
   3 ?    8.0   0.0    0.0026       2.3      28      79 ..     218     269 ..     201     286 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.092
  PF03528.10  62 eRe.vkkLrrlLrqaneed.qLEkelkkkkeledklkqvvedle 103
                 +R  v++L + L++ +ee+ qL ++l+ +   e+ +++ + +++
   MMETSP1325-20131115|294_1  95 KRTpVNELEEKLAKLQEENtQLSQHLESVSCREETIRNYKREMK 138
                 45557888888888776543788888888888888887777776 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 4.1
  PF03528.10  41 Etewnl.lqqErlqviqtqEaeeRev 65 
                 Ete+++ l q r+    + E+++ ev
   MMETSP1325-20131115|294_1 152 ETEIAAvLTQFRQLYEHYGEQRQQEV 177
                 44444444444544444444444443 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.0026
  PF03528.10  28 SLlailketvsdYEtewnllqqErlqviqtqEaeeRevkkLrrlLrqaneed 79 
                 SLl+il+e v   +++++ l + r +++   ++  R ++ Lr+l + ++e++
   MMETSP1325-20131115|294_1 218 SLLSILTEEVGFTDSQIAKLSEHRDKMNRLTDDLHRSLALLRKLKKSVDENQ 269
                 9*********988**************************9999888887554 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.33   2.8e+02      56      69 ..      18      31 ..       6      36 .. 0.64
   2 ?    4.9   1.3     0.037        32       1      62 [.     108     169 ..     100     173 .. 0.86
   3 ?    3.6   0.2     0.093        79      21      56 ..     238     277 ..     217     286 .. 0.62

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.33
  PF14357.1 56 neaverFeaeHPkl 69
               +++ ++F ++HP+ 
  MMETSP1325-20131115|294_1 18 SQQFQQFQQTHPRQ 31
               345677******85 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.037
  PF14357.1   1 klrelLekLheeLeqtdsldeetraeLkelrddieealeeedaseaedeslaerlneaverF 62 
                kl+e+ ++L+++Le++   +e+ r+  +e++ ++ ++l +++++e e ++++ +++++ e+ 
  MMETSP1325-20131115|294_1 108 KLQEENTQLSQHLESVSCREETIRNYKREMKLKMGKLLCNSESPETEIAAVLTQFRQLYEHY 169
                68888899999999999988888888888889999999999999999999999999998886 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.093
  PF14357.1  21 eetraeLkelrddieealee....edaseaedeslaerln 56 
                +e r+++++l dd+++ l+     +++ ++++  +a++++
  MMETSP1325-20131115|294_1 238 SEHRDKMNRLTDDLHRSLALlrklKKSVDENQRVFADKMQ 277
                3567888888888888887766556666666666666665 PP

>> PF13864.1  Calmodulin-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.4    0.0014       1.2      30      78 ..      90     138 ..      72     150 .. 0.79
   2 ?   -1.4   0.0         3   2.5e+03      73      88 ..     171     186 ..     151     192 .. 0.67
   3 ?    0.9   0.1      0.55   4.7e+02      30      61 ..     240     273 ..     224     310 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0014
  PF13864.1  30 apkgvrllseeErlellegLkkkweelnkelqklplvldtlskkrrkee 78 
                  ++ ++ + +E +e l++L++++++l++ l++++ + +t++  +r  +
  MMETSP1325-20131115|294_1  90 GGRKRKRTPVNELEEKLAKLQEENTQLSQHLESVSCREETIRNYKREMK 138
                456667778899****************************999888665 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 3
  PF13864.1  73 krrkeelEkelaeiEe 88 
                ++r++e+   la++E+
  MMETSP1325-20131115|294_1 171 EQRQQEVHFHLAQLER 186
                3456666666666665 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.55
  PF13864.1  30 apkgvrllseeEr..lellegLkkkweelnkelq 61 
                ++ ++++l+++ +  l+ll++Lkk+ +e ++ + 
  MMETSP1325-20131115|294_1 240 HRDKMNRLTDDLHrsLALLRKLKKSVDENQRVFA 273
                5555555555533114678888888888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1344  (0.0983031); expected 273.4 (0.02)
Passed bias filter:                      688  (0.0503218); expected 273.4 (0.02)
Passed Vit filter:                        97  (0.00709479); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.82u 0.39s 00:00:01.21 Elapsed: 00:00:00.85
# Mc/sec: 899.34
//
Query:       MMETSP1325-20131115|288_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-28   97.6   0.0    5.4e-28   97.0   0.0    1.3  1  PF00127.15 Copper binding proteins, plastocyanin/azurin family


Domain annotation for each model (and alignments):
>> PF00127.15  Copper binding proteins, plastocyanin/azurin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.0   0.0   3.9e-32   5.4e-28       2      98 ..     143     237 ..     142     238 .] 0.96

  Alignments for each domain:
  == domain 1    score: 97.0 bits;  conditional E-value: 3.9e-32
                 EEEEEEEEETSEESSSSEEEETT-EEEEEEESSS-EEEEEEETSSTT--TTTTSCTTBETEE....EEEEEEEES-TTEEEEBTTCTTTT-EEEEEE CS
  PF00127.15   2 evklgvesgdlqFetkeitvkkgekvtfvnlavmgHNvvldkdgvpagvdkdkvkaedetkliggGekdsvtfdeagtYkffCsPHaaagMkgkvtv 98 
                 ev lg++sg+l+F ++++++ kg++v+++n+++ +HNvv+d+d++p+gv ++k++++   +l  +Ge++s+ fd ag+Y+++C+PH++agM+g+++v
   MMETSP1325-20131115|288_1 143 EVLLGSDSGQLVFVPAQLKICKGDTVKWINNKGGPHNVVFDEDAIPSGVVAEKISMD--GQLGEEGETYSMSFDVAGNYAYYCEPHRGAGMNGNLVV 237
                 68899***************************************************6..78999******************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.61
# Mc/sec: 934.97
//
Query:       MMETSP1325-20131115|287_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.56
# Mc/sec: 950.13
//
Query:       MMETSP1325-20131115|298_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.89
# Mc/sec: 352.72
//
Query:       MMETSP1325-20131115|299_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0088   15.4   0.2      0.012   14.9   0.2    1.2  1  PF07259.7 ProSAAS precursor


Domain annotation for each model (and alignments):
>> PF07259.7  ProSAAS precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.2   9.1e-07     0.012      16      76 ..      11      74 ..       3      94 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 9.1e-07
  PF07259.7 16 gilvllllgllrlpptlsarpvkeprslsaasaplvetst...plrlrravprgeaagavqela 76
                + v+ l+ l  lppt +a+p  +p+         v t t     r rr++  g aa av   a
  MMETSP1325-20131115|299_1 11 DLGVFTLIRLADLPPTCAAQPPTNPKVWMRLHVRAVSTITefvSSRARRSLEYGSAATAVVLFA 74
               444677888999*************986655555555555111679*************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 809.34
//
Query:       MMETSP1325-20131115|296_1  [L=451]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.32    8.9   6.7       0.45    8.4   4.6    1.3  1  PF09763.4 Exocyst complex component Sec3


Domain annotation for each model (and alignments):
>> PF09763.4  Exocyst complex component Sec3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.6   3.3e-05      0.45     261     331 ..       9      82 ..       2     204 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 3.3e-05
  PF09763.4 261 kssgseeseslstsslsekkteglalrksrkltvkssktlarls...tsaaqkktskrlkpdeafakaLdelep 331
                +ss+s++s+s+s+ss+s+ ++++ ++++s + +++ss+ ++++s   +s+++++ s++lk  + f+  ++ + +
  MMETSP1325-20131115|296_1   9 SSSSSSSSSSSSSSSSSSGSDSSSSSSSSDSDSSSSSSSGSSSSgssSSSSSSSGSGELKVPDEFVARVKSALS 82 
                23333333444444444455555444444444444555554444433555557778888888777766655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1306  (0.0955237); expected 273.4 (0.02)
Passed bias filter:                      507  (0.0370831); expected 273.4 (0.02)
Passed Vit filter:                       126  (0.00921592); expected 13.7 (0.001)
Passed Fwd filter:                        40  (0.00292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.44u 0.42s 00:00:01.86 Elapsed: 00:00:00.91
# Mc/sec: 1187.65
//
Query:       MMETSP1325-20131115|300_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-06   27.2   8.4    2.3e-06   27.2   5.8    1.0  1  PF03798.11 TLC domain
  ------ inclusion threshold ------
      0.076   13.0   0.6      0.076   13.0   0.4    1.7  2  PF10067.4  Predicted membrane protein (DUF2306)
        1.8    8.5   0.0        1.8    8.5   0.0    2.7  3  PF10825.3  Protein of unknown function (DUF2752)


Domain annotation for each model (and alignments):
>> PF03798.11  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   5.8     5e-10   2.3e-06     112     198 .]       4      96 ..       1      96 [. 0.79

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 5e-10
  PF03798.11 112 flslrkilkylrgksklskdllfn.gvlfllsFfvcRlvlfpylillsyldvasisveaap.....lvlpviclilllv..LqllnlyWfylivr 198
                  l++   l+++ +   +   ++ + g l+ + +++cR++  p++++   ld+a+ ++ a +     l+l +++l+++ +  ++ l+lyWf+li r
   MMETSP1325-20131115|300_1   4 PLCAVTALRQIPSW-NG-GTVYTIsGALLWIAYVFCRVLSAPICMYSFHLDMATDPAVAYMsenksLHLAWHVLMWVCFvfIYGLSLYWFWLITR 96 
                 55555666666444.33.3456666****************************98888877*****888888888776633699********976 PP

>> PF10067.4  Predicted membrane protein (DUF2306)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.47   2.1e+03      24      24 ..      31      31 ..       9      51 .. 0.56
   2 ?   13.0   0.4   1.7e-05     0.076      28      70 ..      68     108 ..      58     109 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.47
  PF10067.4 24 a 24
                
  MMETSP1325-20131115|300_1 31 W 31
               1 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.7e-05
  PF10067.4  28 lfiaviatgglvgefslihllslltlitlvlalvairrrniaa 70 
                l +a + +  +v  f++i  lsl++++ ++++l+++ r+++aa
  MMETSP1325-20131115|300_1  68 LHLAWH-VLMWVC-FVFIYGLSLYWFWLITRSLYKALRGDFAA 108
                556666.445666.**************************986 PP

>> PF10825.3  Protein of unknown function (DUF2752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.4   6.6e+03      38      47 ..      29      38 ..      28      43 .. 0.63
   2 ?    1.1   1.3     0.083   3.8e+02      34      51 ..      71      88 ..      68      89 .. 0.85
   3 ?    8.5   0.0    0.0004       1.8      17      32 ..      94     109 ..      91     111 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.4
  PF10825.3 38 lgllllplli 47
               l++++++++ 
  MMETSP1325-20131115|300_1 29 LLWIAYVFCR 38
               5667777665 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.083
  PF10825.3 34 rmnplgllllpllillll 51
               ++++l++++++++  l+l
  MMETSP1325-20131115|300_1 71 AWHVLMWVCFVFIYGLSL 88
               79********99988876 PP

  == domain 3    score: 8.5 bits;  conditional E-value: 0.0004
  PF10825.3  17 ltRalhallhgdlaaA 32 
                +tR+l+  l+gd+aa 
  MMETSP1325-20131115|300_1  94 ITRSLYKALRGDFAAG 109
                69***********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       547  (0.0400088); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.75
# Mc/sec: 370.64
//
Query:       MMETSP1325-20131115|301_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-39  131.9  27.4    3.7e-08   32.8   1.4    6.2  6  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   1.1e-07    0.0015      23      39 .]      14      30 ..       3      30 .. 0.85
   2 !   31.3   0.0   8.1e-12   1.1e-07       5      37 ..      40      74 ..      36      75 .. 0.93
   3 !   24.5   0.2   1.1e-09   1.5e-05       1      37 [.      83     121 ..      83     121 .. 0.95
   4 !   22.7   0.1   4.1e-09   5.6e-05      13      39 .]     142     180 ..     135     180 .. 0.93
   5 !   32.8   1.4   2.7e-12   3.7e-08      10      38 ..     199     231 ..     196     232 .. 0.97
   6 !   18.0   0.8   1.3e-07    0.0017      12      39 .]     251     278 ..     249     278 .. 0.95

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 1.1e-07
                STEEEEEETTSEEEEEE CS
  PF00400.27 23 gpllasgSrDgtirlWd 39
                ++ la++S+D++i++Wd
   MMETSP1325-20131115|301_1 14 SRKLATASSDRSIKVWD 30
                789*************9 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 8.1e-12
                EEEESSSSSEEEEEEESS..STEEEEEETTSEEEE CS
  PF00400.27  5 atlrgHtspVtcvafspd..gpllasgSrDgtirl 37
                atl gH++pV+ +a++++  g llas+S+Dg++ +
   MMETSP1325-20131115|301_1 40 ATLNGHEGPVWQCAWAHPkfGVLLASCSYDGKVLI 74
                79*****************************9965 PP

  == domain 3    score: 24.5 bits;  conditional E-value: 1.1e-09
                 TEEEEEEESSSSSEEEEEEESS..STEEEEEETTSEEEE CS
  PF00400.27   1 geckatlrgHtspVtcvafspd..gpllasgSrDgtirl 37 
                 ++++++ + H s+V++va++p+  g +l ++S+Dg + +
   MMETSP1325-20131115|301_1  83 WTPIHEHTMHDSSVNSVAWAPHeyGLILGCASADGRVSV 121
                 78999******************************9975 PP

  == domain 4    score: 22.7 bits;  conditional E-value: 4.1e-09
                 SEEEEEEESS............STEEEEEETTSEEEEEE CS
  PF00400.27  13 pVtcvafspd............gpllasgSrDgtirlWd 39 
                 ++++++++p             +  +++gS+D+++r+W+
   MMETSP1325-20131115|301_1 142 GCNAISWAPVtalsdttangmpPLKFVTGSCDNNVRIWE 180
                 799***********************************6 PP

  == domain 5    score: 32.8 bits;  conditional E-value: 2.7e-12
                 SSSSEEEEEEESS....STEEEEEETTSEEEEE CS
  PF00400.27  10 HtspVtcvafspd....gpllasgSrDgtirlW 38 
                 H+++V++va++p+    ++++as+S+D+t+ +W
   MMETSP1325-20131115|301_1 199 HKDWVRDVAWAPStgisSNVIASCSEDRTVLIW 231
                 9******************************** PP

  == domain 6    score: 18.0 bits;  conditional E-value: 1.3e-07
                 SSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  12 spVtcvafspdgpllasgSrDgtirlWd 39 
                 +pV+ v++s +g+lla +S D+++ lW+
   MMETSP1325-20131115|301_1 251 APVWRVSWSITGNLLAVSSGDHKVSLWK 278
                 68*************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.80
# Mc/sec: 910.62
//
Query:       MMETSP1325-20131115|303_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.16   11.8  10.0       0.19   11.6   6.9    1.0  1  PF08432.5  Fungal protein of unknown function (DUF1742)
       0.21   11.1  16.5       0.22   11.1  11.5    1.0  1  PF04889.7  Cwf15/Cwc15 cell cycle control protein
        0.6    8.8   7.1       0.65    8.7   5.0    1.0  1  PF05097.7  Protein of unknown function (DUF688)
       0.66   10.4  19.2       0.77   10.2  13.3    1.1  1  PF09538.5  Protein of unknown function (FYDLN_acid)
       0.96    9.8   5.8        1.1    9.5   4.0    1.1  1  PF04520.8  Senescence regulator
        1.1    8.2  11.9        1.4    7.8   8.2    1.2  1  PF01056.13 Myc amino-terminal region
        2.3    7.8  14.8        2.4    7.8  10.3    1.1  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        2.9    7.8   9.0        3.1    7.7   6.2    1.0  1  PF09420.5  Ribosome biogenesis protein Nop16
        3.5    7.0   9.5        3.9    6.8   6.6    1.1  1  PF03286.9  Pox virus Ag35 surface protein
        4.6    6.2  14.8        4.9    6.2  10.2    1.0  1  PF06524.7  NOA36 protein
        5.1    6.8  20.0        6.6    6.4  13.9    1.3  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
        5.9    6.2   8.2        6.6    6.0   5.7    1.1  1  PF11931.3  Domain of unknown function (DUF3449)
        6.3    7.4  11.7        7.7    7.1   8.1    1.1  1  PF02957.10 TT viral ORF2
        7.3    5.7  14.6        7.3    5.7  10.1    1.0  1  PF07423.6  Protein of unknown function (DUF1510)
        7.4    4.1   8.2        7.2    4.2   5.7    1.0  1  PF05642.6  Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   6.9   0.00021      0.19      51     113 ..      15      76 ..      11      80 .] 0.69

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00021
  PF08432.5  51 Pivdaeaeeakkkkkelkeeiekv.kkeyeekqkakkekkkkkkekdkekekkkdkkddkseke 113
                P  + ea++a +k+ ++k+e e+  + + e+++  + e+++++ ++++++++++d++++++  e
  MMETSP1325-20131115|303_1  15 PTAEREAQAAAEKEARIKREAERRaQMDAEAEDFIVGEADDEYDDEEEDDDEEEDDDEEDE--E 76 
                6777899999999999999999876888889999888888877555554444433333222..2 PP

>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1  11.5   0.00024      0.22      97     151 ..      20      78 ..       3      80 .] 0.44

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00024
  PF04889.7  97 eaeededeekeakrkkkleeareidaddsdkseee....sdesdddsdddddeDetaeL 151
                ea+   ++e ++kr+++ + + + +a+d   +e +    ++e+ddd+++ddde++++eL
  MMETSP1325-20131115|303_1  20 EAQAAAEKEARIKREAERRAQMDAEAEDFIVGEADdeydDEEEDDDEEEDDDEEDEEEL 78 
                22333333344444444333333333332222222222244444444455555566655 PP

>> PF05097.7  Protein of unknown function (DUF688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   5.0   0.00071      0.65     183     239 ..      19      71 ..       3      79 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00071
  PF05097.7 183 kkpasaesepvrqlrevvpgekrqellryrvslapnyllnqdiddeeeedenddDev 239
                +++  a++e+   +++  ++e+r+++ ++ + +       ++ ddeee+d++++D+ 
  MMETSP1325-20131115|303_1  19 REA-QAAAEKEARIKR--EAERRAQMDAEAEDFIVGE-ADDEYDDEEEDDDEEEDDD 71 
                443.445555556666..7899999988888887755.4455666666666555552 PP

>> PF09538.5  Protein of unknown function (FYDLN_acid)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2  13.3   0.00085      0.77      48     108 .]      16      73 ..       2      78 .. 0.31

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00085
  PF09538.5  48 aadeeeeaaeekeeeeeeeeddvledddeeedldddledeadddvdldeddDdvleddddd 108
                +a++e++aa+eke+   + + +++  ++ +++++d +  eadd+ d +e+dDd+ eddd++
  MMETSP1325-20131115|303_1  16 TAEREAQAAAEKEA---RIKREAERRAQMDAEAEDFIVGEADDEYDDEEEDDDEEEDDDEE 73 
                22222222111111...11111111111111223344444444444444333322222222 PP

>> PF04520.8  Senescence regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.0    0.0013       1.1      49     105 ..      15      72 ..       2      78 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0013
  PF04520.8  49 araipkie.kgeraaaksakaassapvnvPdwskilksrrrrseeeededdeedddae 105
                + a+++ + ++e++a+ +++a++ a +   ++  i+ +++ + ++ee++ddee+dd+e
  MMETSP1325-20131115|303_1  15 PTAEREAQaAAEKEARIKREAERRAQMDAEAEDFIVGEADDEYDDEEEDDDEEEDDDE 72 
                3333333335678888899999999999999999998855554444444444444443 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   8.2    0.0016       1.4     191     243 ..      13      73 ..       9      78 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0016
  PF01056.13 191 PyPlneseksakvaap.........tpelvlrtspn.sssssgedseseeeeeeeeeeeeeee 243
                 P P +e+e  a++aa          +++ +++++++   + + +d  ++eee+++eee+++ee
   MMETSP1325-20131115|303_1  13 PLPTAERE--AQAAAEkearikreaERRAQMDAEAEdFIVGEADDEYDDEEEDDDEEEDDDEE 73 
                 44555555..44343333445444444455555555333344445555666666666666665 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  10.3    0.0026       2.4     243     303 ..      21      77 ..       4      80 .] 0.47

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0026
                XX................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------- CS
  PF03153.8 243 kqkksekkskie......iQvDGagddssdeseedeeadedeeekdkvieeDlddseDDvseedeed 303
                 q+ +ek+++i+      +Q+D +++d   +   +++++ d+      +eeD+d++eDD  eedee+
  MMETSP1325-20131115|303_1  21 AQAAAEKEARIKreaerrAQMDAEAEDFIVG---EADDEYDD------EEEDDDEEEDD-DEEDEEE 77 
                2222333332323344558999888877652...22222222......33444443443.2333333 PP

>> PF09420.5  Ribosome biogenesis protein Nop16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   6.2    0.0034       3.1      71     129 ..      18      76 ..       3      80 .] 0.51

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0034
  PF09420.5  71 eakkseeasdeakipelkkgearverdaegni..vkykkkkenplddplneleseeskeee 129
                e++++ +a++ea+i+   + e r++ dae +   v++ +++ ++++++ +e+e+ ++++ee
  MMETSP1325-20131115|303_1  18 EREAQAAAEKEARIKR--EAERRAQMDAEAEDfiVGEADDEYDDEEEDDDEEEDDDEEDEE 76 
                2233333444444444..4444444444444455777777777777777776653322222 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   6.6    0.0043       3.9      46     108 ..      15      75 ..       4      80 .] 0.36

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0043
  PF03286.9  46 Pvsekkpkkkrkttkrkpvkkkkskkkekekeeeeekkeeededkdteenendddekeeskds 108
                P++e++ + +++     ++k + + +++ + e+e+    e d++ d+ee+++d++e+++++d 
  MMETSP1325-20131115|303_1  15 PTAEREAQAAAEKEA--RIKREAERRAQMDAEAEDFIVGEADDEYDDEEEDDDEEEDDDEEDE 75 
                433333322221111..1222222223333333333333444444444444422222222222 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  10.2    0.0054       4.9     246     297 ..      25      77 ..      15      80 .] 0.56

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0054
  PF06524.7 246 eegygaykknlssdkygdaksvnygy.esdddeeesaedydeeededddddee 297
                +e+  + k+++    + da++ ++   e+dd+ ++++ed+deeed+d++d+ee
  MMETSP1325-20131115|303_1  25 AEKEARIKREAERRAQMDAEAEDFIVgEADDEYDDEEEDDDEEEDDDEEDEEE 77 
                44555555555555555555555544144677777777777766666655554 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  13.9    0.0073       6.6     155     205 ..      24      74 ..       5      80 .] 0.47

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0073
  PF11705.3 155 eedeeeklsalekkekeldaedeeeedkkeeeeeeeeeeedddf.eDddddd 205
                ++++e++ + + +++ ++dae e+     e+++e ++eeeddd  eDdd++d
  MMETSP1325-20131115|303_1  24 AAEKEARIKREAERRAQMDAEAEDFI-VGEADDEYDDEEEDDDEeEDDDEED 74 
                23445555555545555444444433.3333444344433333303333333 PP

>> PF11931.3  Domain of unknown function (DUF3449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   5.7    0.0072       6.6      22      76 ..      21      75 ..      14      80 .] 0.41

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0072
  PF11931.3 22 ienverkqalteeerekeeelekeassksesseeeseeeseeeseeeeekkiynp 76
                + +  k+a+ ++e e+++++ +ea++    +++++ +++ee+++eee+++ +++
  MMETSP1325-20131115|303_1 21 AQAAAEKEARIKREAERRAQMDAEAEDFIVGEADDEYDDEEEDDDEEEDDDEEDE 75
               4455556666666666664444333333333333333333222222222222222 PP

>> PF02957.10  TT viral ORF2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   8.1    0.0084       7.7      47     114 ..      10      78 ..       2      80 .] 0.65

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0084
  PF02957.10  47 e.pqgkrpkrklilrqspalpaakeekkklakwlettgedaetgpseegdgttgdaededldegdlDeL 114
                 + ++ + ++r+ ++ ++++ +++ e+  +++   e  +  ++++ +e +d+++ d+e+ed de+d +eL
   MMETSP1325-20131115|303_1  10 PpTPLPTAEREAQAAAEKEARIKREAERRAQMDAEAEDFIVGEADDEYDDEEEDDDEEEDDDEEDEEEL 78 
                 234445667777777777777777776555555554454456667788888888999999999999998 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  10.1    0.0081       7.3      52     105 ..      18      76 ..       3      80 .] 0.47

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0081
  PF07423.6  52 eksedeekteeeevkeeekeaakde.dked....dsesekkdeeseeeeeeekekkeee 105
                e++++  +++e ++k+e++  a+ + ++ed    ++++e +dee++++eee++++++ee
  MMETSP1325-20131115|303_1  18 EREAQAAAEKEARIKREAERRAQMDaEAEDfivgEADDEYDDEEEDDDEEEDDDEEDEE 76 
                33444444445555555555554430333355543333333333333333333333332 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   5.7    0.0078       7.2      94     129 ..      36      72 ..       5      79 .. 0.44

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0078
  PF05642.6  94 sqeselqsdteineddkGske.dseedddeeeeednk 129
                +++++++ ++e    ++ ++e d+ee+dd+eee+d++
  MMETSP1325-20131115|303_1  36 ERRAQMDAEAEDFIVGEADDEyDDEEEDDDEEEDDDE 72 
                2223333333322222222221223333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1215  (0.0888678); expected 273.4 (0.02)
Passed bias filter:                      721  (0.0527355); expected 273.4 (0.02)
Passed Vit filter:                       140  (0.0102399); expected 13.7 (0.001)
Passed Fwd filter:                        43  (0.00314511); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.51u 0.42s 00:00:00.93 Elapsed: 00:00:00.76
# Mc/sec: 252.25
//
Query:       MMETSP1325-20131115|302_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-61  205.9   0.0    2.6e-61  205.7   0.0    1.0  1  PF00025.16 ADP-ribosylation factor family
    1.4e-10   40.3   0.4    3.4e-07   29.1   0.1    2.3  2  PF00503.15 G-protein alpha subunit
    1.8e-08   33.7   0.0    2.2e-08   33.5   0.0    1.1  1  PF00071.17 Ras family
    2.1e-08   33.5   0.0    2.7e-08   33.1   0.0    1.1  1  PF09439.5  Signal recognition particle receptor beta subunit
    8.2e-08   32.6   0.0    1.1e-07   32.2   0.0    1.2  1  PF08477.8  Miro-like protein
    6.7e-07   28.5   0.0    7.8e-07   28.3   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    8.8e-06   25.5   0.0    1.3e-05   25.0   0.0    1.2  1  PF01926.18 50S ribosome-binding GTPase
     0.0023   17.3   0.0       0.15   11.4   0.0    2.1  2  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.019   14.3   0.0      0.036   13.4   0.0    1.5  1  PF10662.4  Ethanolamine utilisation - propanediol utilisation
       0.02   14.0   0.0      0.024   13.7   0.0    1.1  1  PF02522.9  Aminoglycoside 3-N-acetyltransferase
      0.041   13.2   0.0        2.4    7.4   0.0    2.1  2  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
       0.12   11.7   0.0       0.32   10.4   0.0    1.7  1  PF13555.1  P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.7   0.0   2.3e-64   2.6e-61       1     173 [.       7     188 ..       7     190 .] 0.98

  Alignments for each domain:
  == domain 1    score: 205.7 bits;  conditional E-value: 2.3e-64
                 CCCCHHCC--.TSEEEEEEE--TT---HHHHHHHHHS-EEEE-S--S-EEEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTT.........ST.SSSEEEEEEBTTTTB--HHHHHHHHH CS
  PF00025.16   1 llsilaklklkkkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellglee.........lkgkrkleiqkcsavkgeglkeglewlse 173
                 ++s+l +l l++k+++il+lGLDnaGKtT+l++lk+ +++ ++PTi++n +el i n++f+++D+GG++ +R+lWk+Yf+++d+v+f+vD+ +r+R+eeak+eL++l++ +el +v++l+l+NK+D+++a+se++lr++lgl+e         ++g r++e+++cs+v+++g+ +g+ wls+
   MMETSP1325-20131115|302_1   7 FYSVLGQLGLYHKNAKILFLGLDNAGKTTLLHMLKESRVQVHSPTIHPNQDELIIGNIRFKTYDLGGHQGARKLWKDYFSTIDGVVFLVDALERSRFEEAKAELDSLMTCDELVNVPFLILGNKIDIATAASEDDLRRALGLHEtygkenserIEGVRPVELFMCSVVRQMGYADGFMWLSK 188
                 578999******************************************************************************************************************************************99999999999*************************97 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00025      0.29      57      79 ..      19      41 ..      13      51 .. 0.89
   2 !   29.1   0.1     3e-10   3.4e-07     222     304 ..      57     133 ..      40     156 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00025
                XEEEEEEEXXXXXXXHHHHHHHH CS
  PF00503.15 57 kevklLlLGqgeSGKsTilkqfk 79
                k+ k+L+LG +  GK+T+l+ +k
   MMETSP1325-20131115|302_1 19 KNAKILFLGLDNAGKTTLLHMLK 41
                789****************9876 PP

  == domain 2    score: 29.1 bits;  conditional E-value: 3e-10
                 .....XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEGGGTTXBXSSXTTSBHHHHHHHHHHHHHTXGGGSSXEEEEEEEXHHH CS
  PF00503.15 222 e....sktefrlvDvGGqrserkkWipcfedvdaiiFlvslsefdqvlyedesvnrleeSlklFksicnnkllkntpiiLflNKlDi 304
                 +    ++++f+++D+GG++  rk W+ +f  +d ++Flv             +  r+ee+    +s+++   l n+p++++ NK+Di
   MMETSP1325-20131115|302_1  57 DeliiGNIRFKTYDLGGHQGARKLWKDYFSTIDGVVFLVD----------ALERSRFEEAKAELDSLMTCDELVNVPFLILGNKIDI 133
                 045557899******************************9..........33446899999999999**999**************8 PP

>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   1.9e-11   2.2e-08       1     119 [.      22     143 ..      22     188 .. 0.79

  Alignments for each domain:
  == domain 1    score: 33.5 bits;  conditional E-value: 1.9e-11
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST.TTSSEEEE---TTGGG.......G CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae.envpivLvGnKvDlee.......k 119
                 K++++G  + GKt+ll+   e++  + + +Ti    + ++ e+   +++++ +D  G +  ++l + y+++ +g++ + d  +r+ fe++k  ++ + +  e  nvp++++GnK+D+++       +
   MMETSP1325-20131115|302_1  22 KILFLGLDNAGKTTLLHMLKESR-VQVHSPTI----HPNQDELIIGNIRFKTYDLGGHQGARKLWKDYFSTIDGVVFLVDALERSRFEEAKAELDSLMTCDElVNVPFLILGNKIDIATaaseddlR 143
                 899*************9876666.67889***....3334444456899**********************************************9999888988************9866655551 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   2.4e-11   2.7e-08       3     137 ..      20     146 ..      18     151 .. 0.84

  Alignments for each domain:
  == domain 1    score: 33.1 bits;  conditional E-value: 2.4e-11
                --EEEEE--TT---HHHHHHHHHSS-------SS-EEETT-...-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT---HHHHHHHH CS
  PF09439.5   3 kpavllvGlsdsGKTslftrLttdsvkktvtSqessaalkvksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflakspklikdaL 137
                + ++l++Gl ++GKT+l++ L +  v+     ++++  + +    + +++  D+ Gh+  r+ l +   + s++ g+vf+vD+   ++  +  AEl  ++++  e    +v++li  nK ++++a s+  ++ aL
  MMETSP1325-20131115|302_1  20 NAKILFLGLDNAGKTTLLHMLKESRVQVHSPTIHPNQDELI--IGNIRFKTYDLGGHQGARK-LWKD--YFSTIDGVVFLVDALERSRFEEAKAEL-DSLMTCDE--LVNVPFLILGNKIDIATAASEDDLRRAL 146
                6789********************99999999988888887..67889999******99885.6665..5899*********98888888888886.45555544..35799***************99999887 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   9.7e-11   1.1e-07       1     119 []      22     132 ..      22     132 .. 0.84

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 9.7e-11
  PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                k++ +G  ++GK++ll+ l  e+++      ++++ t+  +  e+++ +  ++  dlgg++ + k  ++ + + d++++++d  +++ +ee+++ l++l    +l +++p  ++gnk+D
  MMETSP1325-20131115|302_1  22 KILFLGLDNAGKTTLLHMLK-ESRV------QVHSPTIHPNQDELIIGNIRFKTYDLGGHQGARKLWKDYFSTIDGVVFLVDALERSRFEEAKAELDSLMTCDEL-VNVPFLILGNKID 132
                77889999********9776.5555......4555555555557777777799********999999999*********************99988888888864.89*********99 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   6.9e-10   7.8e-07       1     135 [.      22     145 ..      22     177 .. 0.69

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 6.9e-10
  PF04670.7   1 klLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesre.leedlekfqeileallqysp..eakvfvlihKmDlisedereeifee 135
                k+L++G  ++GKt++    ++ +    ++    Ti+ +q+++ + gn+ +++ D+gG +   +       ++ fs+++ +++++D+  r+ +ee+ +++ +++    ++++  ++ + +l +K+D  +   ++++ ++
  MMETSP1325-20131115|302_1  22 KILFLGLDNAGKTTL----LHMLKESRVQVHSPTIHPNQDEL-IIGNIRFKTYDLGGHQGARKL-----WKDYFSTIDGVVFLVDALERSrFEEAKAELDSLM----TCDElvNVPFLILGNKIDIATAASEDDLRRA 145
                89************5....55555555556689*********.79*************877766.....4899*************95543555555555555....4444114455666688887776665555444 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.1e-08   1.3e-05       1     114 []      22     130 ..      22     130 .. 0.62

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 1.1e-08
                 EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE..ETTEEEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEE.TTS.HHHH......HHHHHHHHHHTCCCEEEEEEC CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev..kkekiilvDtPGiiegasedkeiegikkylekv.eradvlllvvd.asa.vlke......adkellneleakkplilvlnk 114
                 ++ ++G+ N+GK+tL+  L +++++        T ++++ e+   + ++  +D+ G           +g +k ++    ++d+++++vd +++ + +e      +  ++ +el  ++p++++ nk
   MMETSP1325-20131115|302_1  22 KILFLGLDNAGKTTLLHMLKESRVQVH----SPTIHPNQDELiiGNIRFKTYDLGG----------HQGARKLWKDYfSTIDGVVFLVDaLERsRFEEakaeldSLMTC-DEL-VNVPFLILGNK 130
                 5899***************97655333....4456664444321222489******..........2356788999999**********55545222212222222222.333.66777776665 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.017        19       4      32 ..      21      49 ..      18      64 .. 0.77
   2 !   11.4   0.0   0.00013      0.15      76     154 ..      70     152 ..      51     184 .. 0.71

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.017
                EEEEEEESTT---HHHHHHHHHHCCCCEH CS
  PF00009.22  4 rnigiighvDhGKtTltdallykagaisk 32
                  i ++g  ++GKtTl+  l  +  ++++
   MMETSP1325-20131115|302_1 21 AKILFLGLDNAGKTTLLHMLKESRVQVHS 49
                5677888889*******999877666655 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.00013
                 E----GGGHHHHHHHHHT-SEEEEEEETTS-.....S-HHHHHHHHHHHHTT--EEEEEE-TTSTCHHHHHHHHHHHHHHHHHC CS
  PF00009.22  76 DtPGHvdFskevirglrvlDgavlvvdaveG.....vepqTeevlrlakklgvkiivviNKiDrveaeleeiveelkeklleky 154
                 D  GH+   k      +++Dg+v +vda e       ++    ++   + ++v+++++ NKiD + a  e   + +   l e+y
   MMETSP1325-20131115|302_1  70 DLGGHQGARKLWKDYFSTIDGVVFLVDALERsrfeeAKAELDSLMTCDELVNVPFLILGNKIDIATAASEDDLRRAL-GLHETY 152
                 666676666677777899***********7777665888888888888999************99665555554444.333344 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.1e-05     0.036       2      30 ..      21      49 ..      20      61 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.1e-05
  PF10662.4  2 kkilliGkvgaGKTtLtqalkgeelkykk 30
                kil++G  +aGKTtL   lk+ +++ ++
  MMETSP1325-20131115|302_1 21 AKILFLGLDNAGKTTLLHMLKESRVQVHS 49
               59*******************99987765 PP

>> PF02522.9  Aminoglycoside 3-N-acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.1e-05     0.024     126     177 ..      16      69 ..       8     121 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.1e-05
  PF02522.9 126 lyeldgkvLlLGvdld.slTllHla.Eeladvpykrvkeyepiledgervwkef 177
                ly +++k+L+LG d   + TllH+  E++++v+ ++++ ++  l  g+ + k++
  MMETSP1325-20131115|302_1  16 LYHKNAKILFLGLDNAgKTTLLHMLkESRVQVHSPTIHPNQDELIIGNIRFKTY 69 
                79***********975278999*6449*******99999883333455555544 PP

>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.027        31      11      22 ..      31      42 ..      22      58 .. 0.76
   2 ?    7.4   0.0    0.0021       2.4     113     159 ..      87     140 ..      74     151 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.027
                ---HHHHHHHHC CS
  PF02492.14 11 sGKTtLleklle 22
                +GKTtLl  l e
   MMETSP1325-20131115|302_1 31 AGKTTLLHMLKE 42
                9******87764 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0021
                 EE-EEEEEEETTTH......CHHHHHHHHHHHHHCT-SEEEEE-CCCTTTT... CS
  PF02492.14 113 gldavvtvvdvknl......tegedkpekledqlaaAdlivlnKiDlldae.ad 159
                 ++d+vv +vd+ +       + + d+  +  + +++  li+ nKiD+++a+ +d
   MMETSP1325-20131115|302_1  87 TIDGVVFLVDALERsrfeeaKAELDSLMTCDELVNVPFLILGNKIDIATAAsED 140
                 7899*******5557777765555666667777778889999******998433 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00028      0.32       6      40 ..       3      37 ..       1      40 [. 0.86

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00028
  PF13555.1  6 lvNWgtfdghtveidpkgkntlltGasGsGKSTll 40
               lvNW +    ++ +  k+ + l+ G   +GK+Tll
  MMETSP1325-20131115|302_1  3 LVNWFYSVLGQLGLYHKNAKILFLGLDNAGKTTLL 37
               89**7777788888888889*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.63
# Mc/sec: 722.71
//
Query:       MMETSP1325-20131115|305_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-10   37.8   0.0    1.2e-09   37.5   0.0    1.1  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    0.00072   19.4   0.0     0.0011   18.8   0.0    1.3  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.024   14.3   0.0      0.041   13.6   0.0    1.4  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
      0.082   12.6   0.0       0.11   12.2   0.0    1.2  1  PF11545.3  Cell surface heme-binding protein Shp


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.0   3.5e-13   1.2e-09       1      62 [.      16      75 ..      16      82 .. 0.94

  Alignments for each domain:
  == domain 1    score: 37.5 bits;  conditional E-value: 3.5e-13
                EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTE CS
  PF00076.17  1 lfVgnLppdvteeeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngk 62
                lfV+n+p  ++e+e  ++  k  ++ s+++ +d  +++  ++fVeF+s e a +A+   +g+
   MMETSP1325-20131115|305_1 16 LFVTNIPDGMSESEFDQIYTKHDGFLSCRIRKD--RKNAVCGFVEFQSGEHASRAMGLTQGH 75
                8*******************************9..********************9877776 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   3.1e-07    0.0011       1      61 [.      16      75 ..      16      82 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 3.1e-07
  PF14259.1  1 lyvrglppsvteedlreffspygkvegvriprnkdgrgrgf..AfvefeseedAqkalkkln.l 61
               l+v+++p  ++e++  ++  ++    ++ri +++    ++   +fvef s e+A++a+   + +
  MMETSP1325-20131115|305_1 16 LFVTNIPDGMSESEFDQIYTKHDGFLSCRIRKDR----KNAvcGFVEFQSGEHASRAMGLTQgH 75
               79********************9999******94....555679*************9877655 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.2e-05     0.041      13      45 ..      44      76 ..      42      87 .] 0.82

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.2e-05
  PF13893.1 13 rikifrkkggqAfvefdtveaArkakeylngvk 45
               ri+  rk+  ++fvef++ e A +a+   +g++
  MMETSP1325-20131115|305_1 44 RIRKDRKNAVCGFVEFQSGEHASRAMGLTQGHV 76
               6777888899***************98777765 PP

>> PF11545.3  Cell surface heme-binding protein Shp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.1e-05      0.11       7      50 ..      41      83 ..      35      87 .] 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.1e-05
  PF11545.3  7 yscvirrdyrhpvsgeiedsggeaafeigqgmvegvvysdglle 50
                sc ir+d ++ v+g +e   ge+a     g+ +g v  +  l 
  MMETSP1325-20131115|305_1 41 LSCRIRKDRKNAVCGFVEFQSGEHASR-AMGLTQGHVAHEQALA 83
               69**********************864.5677777776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 353.36
//
Query:       MMETSP1325-20131115|306_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.67
# Mc/sec: 1126.65
//
Query:       MMETSP1325-20131115|308_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-05   22.9   0.4         24    5.3   0.0    5.3  6  PF00560.28 Leucine Rich Repeat
    0.00045   19.6   0.3        9.2    5.9   0.1    4.1  4  PF12799.2  Leucine Rich repeats (2 copies)
    0.00083   19.0   1.7         20    5.5   0.0    4.7  5  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
      0.011   15.3   0.3       0.62    9.7   0.0    2.6  2  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0082        28       4      19 ..       7      23 ..       5      26 .. 0.81
   2 ?    2.7   0.0     0.051   1.7e+02       7      22 .]      34      50 ..      29      50 .. 0.84
   3 ?    2.1   0.0     0.081   2.8e+02       4      17 ..      56      70 ..      55      76 .. 0.78
   4 ?   -2.1   0.0       1.9   6.6e+03       2      19 ..     115     133 ..     114     136 .. 0.64
   5 ?   -0.5   0.0      0.56   1.9e+03       2      16 ..     139     154 ..     138     159 .. 0.78
   6 !    5.3   0.0     0.007        24       5      19 ..     166     181 ..     163     184 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0082
                EEEETSSBCB.CHHHHH CS
  PF00560.28  4 eLdLsgNnlt.slppsl 19
                +  Ls+N+l+ s+p +l
   MMETSP1325-20131115|308_1  7 HFQLSYNQLSnSVPTEL 23
                677*******8899876 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.051
                ETSSBCB.CHHHHHHHH CS
  PF00560.28  7 LsgNnlt.slppslsnL 22
                Ls+N++t + p++l++L
   MMETSP1325-20131115|308_1 34 LSHNKFTgKTPSELGQL 50
                9******9999887765 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.081
                EEEETSSBCB.CHHH CS
  PF00560.28  4 eLdLsgNnlt.slpp 17
                + ++ +N+l+ ++p 
   MMETSP1325-20131115|308_1 56 YFNFYSNQLCdDVPT 70
                67999*****77886 PP

  == domain 4    score: -2.1 bits;  conditional E-value: 1.9
                 ESEEEETSSBCB.CHHHHH CS
  PF00560.28   2 LeeLdLsgNnlt.slppsl 19 
                 L++L+     +t ++p  +
   MMETSP1325-20131115|308_1 115 LTSLYYYQQGITgTIPTQF 133
                 5566655567777788766 PP

  == domain 5    score: -0.5 bits;  conditional E-value: 0.56
                 ESEEEETSSBCB.CHH CS
  PF00560.28   2 LeeLdLsgNnlt.slp 16 
                 L++  L  N lt + p
   MMETSP1325-20131115|308_1 139 LTYVELGTNGLTgTTP 154
                 8899999999996655 PP

  == domain 6    score: 5.3 bits;  conditional E-value: 0.007
                 EEETSSBCB.CHHHHH CS
  PF00560.28   5 LdLsgNnlt.slppsl 19 
                 L+Ls+N lt  lp  l
   MMETSP1325-20131115|308_1 166 LSLSDNELTgPLPTML 181
                 99*******9999755 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.1    0.0027       9.2       8      37 ..      10      40 ..       2      52 .. 0.80
   2 ?    2.8   0.0     0.025        84       8      26 ..      34      53 ..      27      76 .. 0.82
   3 ?    4.0   0.0      0.01        34      12      37 ..     124     150 ..     113     157 .. 0.78
   4 !    4.1   0.0    0.0092        31       6      23 ..     166     184 ..     163     188 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0027
  PF12799.2  8 LsnNnIk.dlppelanLpnLktLnLsnNpis 37
               Ls+N+++ ++p el++   L+   Ls+N+++
  MMETSP1325-20131115|308_1 10 LSYNQLSnSVPTELGQIVELTAAILSHNKFT 40
               8999999557778999999998889999886 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.025
  PF12799.2  8 LsnNnIk.dlppelanLpnL 26
               Ls+N+ + + p el++L++ 
  MMETSP1325-20131115|308_1 34 LSHNKFTgKTPSELGQLRKM 53
               88999986678789999886 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.01
  PF12799.2  12 nIk.dlppelanLpnLktLnLsnNpis 37 
                 I+  +p +++ L++L++  L  N ++
  MMETSP1325-20131115|308_1 124 GITgTIPTQFGLLTDLTYVELGTNGLT 150
                677569998999*********999987 PP

  == domain 4    score: 4.1 bits;  conditional E-value: 0.0092
  PF12799.2   6 LdLsnNnIkd.lppelanL 23 
                L+Ls+N ++  lp  l+n+
  MMETSP1325-20131115|308_1 166 LSLSDNELTGpLPTMLGNM 184
                99*******6699989887 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0057        20       4      17 ..       5      18 ..       2      25 .. 0.76
   2 ?    3.9   0.0      0.02        68       8      24 .]      33      49 ..      21      49 .. 0.80
   3 ?    2.3   0.0     0.064   2.2e+02       6      19 ..      56      69 ..      50      77 .. 0.74
   4 ?   -2.0   0.0       1.6   5.4e+03       3      15 ..     138     150 ..     136     153 .. 0.61
   5 ?    2.9   0.0     0.041   1.4e+02       7      23 ..     166     182 ..     161     183 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0057
  PF13516.1  4 LtsLdLsnNqigde 17
                ++++Ls+Nq+++ 
  MMETSP1325-20131115|308_1  5 VSHFQLSYNQLSNS 18
               56899******985 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.02
  PF13516.1  8 dLsnNqigdeGlsaLan 24
                Ls+N+++++  s L++
  MMETSP1325-20131115|308_1 33 ILSHNKFTGKTPSELGQ 49
               49*******99999986 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.064
  PF13516.1  6 sLdLsnNqigdeGl 19
               ++++ +Nq+ d+  
  MMETSP1325-20131115|308_1 56 YFNFYSNQLCDDVP 69
               67999****99864 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 1.6
  PF13516.1   3 nLtsLdLsnNqig 15 
                 Lt+  L+ N+++
  MMETSP1325-20131115|308_1 138 DLTYVELGTNGLT 150
                4566666666665 PP

  == domain 5    score: 2.9 bits;  conditional E-value: 0.041
  PF13516.1   7 LdLsnNqigdeGlsaLa 23 
                L Ls+N +++    +L+
  MMETSP1325-20131115|308_1 166 LSLSDNELTGPLPTMLG 182
                89******987776665 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.024        81      27      60 ..       5      38 ..       1      39 [. 0.75
   2 ?    9.7   0.0   0.00018      0.62       3      56 ..     139     192 ..     131     193 .] 0.90

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.024
  PF13855.1 27 LkvLdLsgnnlksispeafkgLpsLreLnLsgNr 60
                 ++ Ls+n l++  p  + + + L+   Ls+N+
  MMETSP1325-20131115|308_1  5 VSHFQLSYNQLSNSVPTELGQIVELTAAILSHNK 38
               5678899999976666667888888888888887 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00018
  PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnL 56 
                L+++ L  N l+   ++ F+  +  + L+Ls+n+l+   p ++ ++ + ++ n+
  MMETSP1325-20131115|308_1 139 LTYVELGTNGLTGTTPTQFGLFTDVTGLSLSDNELTGPLPTMLGNMDQMQWMNV 192
                889999999999999999999999***********9999999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.60
# Mc/sec: 770.83
//
Query:       MMETSP1325-20131115|304_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-09   37.2   0.0    2.6e-09   36.9   0.0    1.2  1  PF00241.15 Cofilin/tropomyosin-type actin-binding protein


Domain annotation for each model (and alignments):
>> PF00241.15  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   1.9e-13   2.6e-09      16     124 ..      83     204 ..      67     207 .. 0.75

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 1.9e-13
                 ECEEEEEE-TTSSSEEEEEE.E-S-HCCC........CCCTS-..TTS-EEEEEEEEEEBS....S-EEEEEEEEEE--TTS-HHHCHHHHHCCHHHHHHH----EEEEES-GGGGSHHHHCH CS
  PF00241.15  16 kryiifkidknkkkivveqvgetgdsyde........lveelk..erecrYavldveytee....eskkskivfvswcpdgApvkkkmlyASskdalkkslkgikvevqatdasdlseeelke 124
                   y++  +++n k+++++++g ++++ d         +++el+   ++  ++ ++ +  ++     sk+ ki+fv+w p++Ap  +k+ +  +k a+k++++g ++++ ++  +d++  el +
   MMETSP1325-20131115|304_1  83 CCYMLAIYSSNGKSLELVASG-PEEGPDGlgkcgmdmFKNELSnySDKAGWGGFRCNAVDNrqntISKRAKIIFVQWMPENAPAMRKAKMGPHKGAMKETFTGAHCDIVVEKPEDIDAAELVK 204
                 556666677777777777654.33333333334444488888888778888888887665577778***************************************************887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 1005.61
//
Query:       MMETSP1325-20131115|309_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.74
# Mc/sec: 252.59
//
Query:       MMETSP1325-20131115|312_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.039   13.0   0.3      0.054   12.6   0.2    1.2  1  PF06524.7 NOA36 protein


Domain annotation for each model (and alignments):
>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   3.9e-06     0.054     238     283 ..      93     137 ..      67     153 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 3.9e-06
  PF06524.7 238 trgeesddeegygaykknlssdkygdaksvnygyesdddeeesaed 283
                 r + +ddee +g++k +++ ++ g+++ +n g++ dd+e+e++ed
  MMETSP1325-20131115|312_1  93 PRNQTADDEEPVGRFKFTVGVEEAGGVAVANDGEG-DDEEKEDEED 137
                456778*********************98888887.6666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.89
# Mc/sec: 702.75
//
Query:       MMETSP1325-20131115|314_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-24   86.0   4.6    8.8e-14   51.2   0.1    2.4  2  PF10693.4 Protein of unknown function (DUF2499)
    5.6e-20   70.8   0.2    1.4e-19   69.5   0.1    1.7  1  PF12159.3 Protein of unknown function (DUF3593)


Domain annotation for each model (and alignments):
>> PF10693.4  Protein of unknown function (DUF2499)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.5   6.4e-13   4.3e-09       1      42 [.     139     180 ..     139     186 .. 0.93
   2 !   51.2   0.1   1.3e-17   8.8e-14      25      89 ..     238     302 ..     232     303 .. 0.87

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 6.4e-13
  PF10693.4   1 aLSlptWliHissvlEWllailllarygeltkrkelrllala 42 
                aLS+ptW++H+ssv E ++a+ l+++y+ +t++++++ +++ 
  MMETSP1325-20131115|314_1 139 ALSIPTWAVHFSSVAEFIFAMGLVWQYAGVTGNEKWKGVTWV 180
                69**********************************999885 PP

  == domain 2    score: 51.2 bits;  conditional E-value: 1.3e-17
  PF10693.4  25 arygeltkrkelrllalamlpalvsalaaitwHlfdnseslellvtlqaaltllgnitlalaalr 89 
                 +y +lt+  ++++    mlp+++s++aa+t+H+f n++++++lvtlqa lt lgn+tla+a +r
  MMETSP1325-20131115|314_1 238 LKYVRLTDAPAFHFGDQGMLPSHASGVAACTYHFFFNAAAVSFLVTLQAGLTCLGNTTLAIACYR 302
                566666666677777789********************************************987 PP

>> PF12159.3  Protein of unknown function (DUF3593)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   0.1     2e-23   1.4e-19      34      89 ..       1      56 [.       1      59 [. 0.97

  Alignments for each domain:
  == domain 1    score: 69.5 bits;  conditional E-value: 2e-23
  PF12159.3 34 GfaltLlFvavtivaailakevygeeLanvDlLHglaeslLtlsnllivlGfrkal 89
               Gf+ +LlFv++ti+++i++k+ y ++La+vD+LHg+ae lLt+sn+l+vlG+r+a+
  MMETSP1325-20131115|314_1  1 GFSYLLLFVFATIPTGIISKTQYSSSLADVDWLHGGAELLLTVSNVLLVLGLRRAI 56
               8***************************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:01.01
# Mc/sec: 766.36
//
Query:       MMETSP1325-20131115|315_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.69
# Mc/sec: 177.12
//
Query:       MMETSP1325-20131115|318_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.62
# Mc/sec: 564.30
//
Query:       MMETSP1325-20131115|320_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-07   28.7   0.4    6.7e-07   28.5   0.3    1.1  1  PF05346.6 Eukaryotic membrane protein family
  ------ inclusion threshold ------
      0.077   10.3   0.0      0.083   10.2   0.0    1.0  1  PF09735.4 Membrane-associated apoptosis protein


Domain annotation for each model (and alignments):
>> PF05346.6  Eukaryotic membrane protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.3   9.8e-11   6.7e-07     251     320 ..       2      69 ..       1      74 [. 0.91

  Alignments for each domain:
  == domain 1    score: 28.5 bits;  conditional E-value: 9.8e-11
  PF05346.6 251 kltrrlglvllplvvlivrvlvqivskllasklnvlalistivlalliflvllllKlllsilllkyaisk 320
                ++trr+gl  lp+++++ r +  i+s++ +    ++a+ + ++l l+if++l+ lK+l +i l  ++ + 
  MMETSP1325-20131115|320_1   2 SVTRRVGLAQLPFACIFCRFIQDIWSRFCS--RFQVASAERMYLGLVIFMCLFQLKVLSGIWLAGVSANY 69 
                589*************************66..588999*************************9998876 PP

>> PF09735.4  Membrane-associated apoptosis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   1.2e-05     0.083     258     319 ..      45     106 ..      27     112 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 1.2e-05
  PF09735.4 258 lvchdeLlretsildlwklaLqenlvvtlfRdevlllHkeiqelleslkgesKriadikevk 319
                lv   +L + + ++ +w   +  n+v+++ R +++  H++    +  +k++sK ++++ +++
  MMETSP1325-20131115|320_1  45 LVIFMCLFQLKVLSGIWLAGVSANYVIKVERSNYVEAHQSPAGPVGVSKNKSKIMKKLADST 106
                3444556666777788*****************************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.71
# Mc/sec: 384.77
//
Query:       MMETSP1325-20131115|319_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.63
# Mc/sec: 1015.60
//
Query:       MMETSP1325-20131115|321_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-06   25.7   1.0    0.00011   21.8   0.1    2.3  2  PF00400.27 WD domain, G-beta repeat
     0.0028   15.9   0.0     0.0033   15.6   0.0    1.1  1  PF02239.11 Cytochrome D1 heme domain


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   1.6e-08   0.00011      17      39 .]      10      32 ..       4      32 .. 0.91
   2 ?    2.3   0.1     0.023   1.6e+02      15      29 ..      53      67 ..      46      73 .. 0.76

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 1.6e-08
                EEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27 17 vafspdgpllasgSrDgtirlWd 39
                  fspdg++++ gS+Dg  ++Wd
   MMETSP1325-20131115|321_1 10 AIFSPDGRYVVAGSEDGHAHVWD 32
                569*******************9 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.023
                EEEEEESSSTEEEEE CS
  PF00400.27 15 tcvafspdgpllasg 29
                 +v+++p ++++a +
   MMETSP1325-20131115|321_1 53 VDVSWNPKQHCVALS 67
                589*****7777655 PP

>> PF02239.11  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   4.8e-07    0.0033      41     140 ..       9     116 ..       5     145 .. 0.69

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 4.8e-07
                 EEE---.--EEEEE---SEEEEEETTSSS.EEEEE.E---B----EE--TTT...-EEE--TBTTE.EEEE-----.-EEEEEE-----TTT.S---EEEEEE-SSSS CS
  PF02239.11  41 srvfasdgRyvyvigRDgkltliDLwake.ivaev.kaGlnarsvavSqedr...yvivgnYlPgq.lvildaetL.elvkvistrgltvde.resRVaaivasperr 140
                 s +f++dgRyv   + Dg+ ++ D  +   ++ ++  +G na  v+vS++ +    ++  +  P   lv    + L e+  +  t++ + d+ ++ R  a  +s er+
   MMETSP1325-20131115|321_1   9 SAIFSPDGRYVVAGSEDGHAHVWDAITGDrVISNLsNFGFNAPLVDVSWNPKqhcVALSCAGGPHPvLVCYSDRGLeEPSSTTDTTETAADQqQKERTLAAKQSMERH 116
                 789*********************98876666666379**********665511122333333432033334445524556666666555555666776666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       977  (0.0714599); expected 273.4 (0.02)
Passed bias filter:                      538  (0.0393505); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.43s 00:00:00.96 Elapsed: 00:00:00.65
# Mc/sec: 637.80
//
Query:       MMETSP1325-20131115|317_1  [L=545]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-08   33.7   0.2    6.3e-05   22.8   0.2    3.5  2  PF07773.6 Protein of unknown function (DUF1619)


Domain annotation for each model (and alignments):
>> PF07773.6  Protein of unknown function (DUF1619)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.2   4.6e-09   6.3e-05     105     294 .]      44     284 ..      16     284 .. 0.69
   2 !    4.6   0.0    0.0015        21     142     241 ..     328     441 ..     306     466 .. 0.67

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 4.6e-09
  PF07773.6 105 ssakYkvgdplltyk.....essksvallrlPasltsgeCqekrpvrFlqsid.tsCtrrsleelee.ve.alslaqysslrllstpkks....................sgekvnitvqleladslsgllla.............................ltpsllseavegelcdnvvvevkytllynstn.itelklilltanltlkd.ltnas.lqqrfevkFlqen.e............tksntlsGnpGYlvGkp 294
                + ++Y vg +l  ++       +   +++ +P++  +g C e+  + F+ s + +sC+r   ++l++ +e ++++  ++   ++ +  +s                                          +                               +++l+++  g  c+++  +v  t + n++n i+++   ++++ +++++ +t  +   q+f++++++e+              + + + sGnpGY++G p
  MMETSP1325-20131115|317_1  44 TTTEYDVGAVLPAAHkkgdgMHAAYGGYFPVPTAGVDGRCVESSYATFMTSVRdSSCLRV-TDDLQSaCEaTFDAGRFTTGLYVGVAPDSdwaetggatkacdddtaddsC---------------------EtaewvkvrintvkfldpdsgdltelvagvAGSEALNSTFYGGVCRQALRSVTWTVIANNQNkISGVLADVVLTDVAESNsTTVPTvALQEFNIEYTAESfDmsygvnareygnAVNMSRSGNPGYIQGLP 284
                567888888888777777666677889************************999****64.44444313336666655555555444445466555554555444432220.....................1123344444455555558888889*999988999999*****************99999999****99999999999996444441458899997766433111111111111456789*******9987 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0015
  PF07773.6 142 krpvrFlqsidtsCtrrsleeleevealslaqyssl.rllstpkkssgekvnitvqleladslsgllla..............ltpsllseavegelcdnvvvevkytllynstn 241
                 ++v+F +++ t C+  sl + e  +  + +++s +  l++ +++s+g+ v ++v l+l d   g++ +               t+++ s    +  c+  ++++++++l  + +
  MMETSP1325-20131115|317_1 328 TQSVEFGVDMMTGCML-SLTQSELATMCDDSETSPYiALNERVYASTGSSVYAPVFLNLTDTHVGMFGNadpldvtqwleidiGTTTMGSWDKSELECSHLITSLNLKFLVAYVG 441
                689************6.44444444444444444430344555555999999999999999998888887777776776666433333333334555666666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.36s 00:00:01.17 Elapsed: 00:00:00.75
# Mc/sec: 1741.35
//
Query:       MMETSP1325-20131115|322_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.65
# Mc/sec: 1076.52
//
Query:       MMETSP1325-20131115|323_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.65
# Mc/sec: 538.26
//
Query:       MMETSP1325-20131115|325_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.009   15.9   2.5      0.011   15.6   1.1    1.6  1  PF07197.7  Protein of unknown function (DUF1409)
  ------ inclusion threshold ------
      0.012   14.2   2.3      0.014   14.0   1.6    1.1  1  PF12777.2  Microtubule-binding stalk of dynein motor
      0.033   13.3   0.1      0.043   13.0   0.0    1.2  1  PF00912.17 Transglycosylase
      0.063   12.5   3.1      0.079   12.2   2.1    1.1  1  PF11180.3  Protein of unknown function (DUF2968)
       0.11   11.6   1.4        0.2   10.9   1.0    1.5  1  PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
       0.14   11.4   2.6       0.18   11.1   1.8    1.1  1  PF13870.1  Domain of unknown function (DUF4201)
       0.23   10.9   2.8       0.32   10.4   1.9    1.2  1  PF04156.9  IncA protein
          1    8.7   3.6        1.6    8.1   2.5    1.3  1  PF04977.10 Septum formation initiator
          2    8.3  12.2        6.1    6.8   8.4    1.7  1  PF14346.1  Domain of unknown function (DUF4398)


Domain annotation for each model (and alignments):
>> PF07197.7  Protein of unknown function (DUF1409)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   1.1   7.5e-06     0.011      18      48 ..      17      47 ..      11      48 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 7.5e-06
  PF07197.7 18 rarLeeinaelaeelakladlpkaiEeqksK 48
                a+L + +aela+e+ak  +l+  +Ee++ K
  MMETSP1325-20131115|325_1 17 QAELAKMKAELAQEKAKSSNLAMDLEEARTK 47
               599*************************987 PP

>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.6   9.2e-06     0.014     220     265 ..       3      48 ..       1      65 [. 0.90

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 9.2e-06
  PF12777.2 220 rqalekanaelaaaqeklaaikakiaelnanlaeltarfekatadk 265
                   l ka+a +++aq  la++ka +a+ +a+ ++l+  +e a ++k
  MMETSP1325-20131115|325_1   3 AAELAKAEASIKQAQAELAKMKAELAQEKAKSSNLAMDLEEARTKK 48 
                56799***********************************998876 PP

>> PF00912.17  Transglycosylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.8e-05     0.043      83     123 ..      26      66 ..       4      78 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.8e-05
  PF00912.17  83 rtlsrKlkeailAlklekklskdeilelYlnsvylgrgvyG 123
                 +  ++K+k   lA+ le+  +k+  l +Yl+++ + +g+ G
   MMETSP1325-20131115|325_1  26 ELAQEKAKSSNLAMDLEEARTKKGWLXVYLQQATYVGGALG 66 
                 33477******************************999888 PP

>> PF11180.3  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.1   5.2e-05     0.079      96     151 ..       2      57 ..       1      64 [. 0.86

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.2e-05
  PF11180.3  96 qtaqLadveirraqleaqkaqlerliaasearaerLqadlelareQeaqvaarqkq 151
                ++a+La+ e    q++a+ a+++ ++a+++a+ + L  dle ar+ +  +  + +q
  MMETSP1325-20131115|325_1   2 KAAELAKAEASIKQAQAELAKMKAELAQEKAKSSNLAMDLEEARTKKGWLXVYLQQ 57 
                68899999999999999999999999999999999999999999988777766666 PP

>> PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.0   0.00013       0.2     213     251 ..       3      41 ..       1      56 [. 0.89

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00013
  PF05278.7 213 ekelaekEKeikevrekvtemaaklgelemkrarlekrl 251
                 +ela+ E  ik++++++ +m+a+l++ ++k + l   l
  MMETSP1325-20131115|325_1   3 AAELAKAEASIKQAQAELAKMKAELAQEKAKSSNLAMDL 41 
                689****************************99997766 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.8   0.00012      0.18      90     138 ..       3      51 ..       1      53 [. 0.92

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00012
  PF13870.1  90 eeeleelkkelkekeeklaklrkelykvklerdklrkenkklrqqggll 138
                ++el++++ ++k+ +++lak ++el + k++ ++l  + ++ r++ g l
  MMETSP1325-20131115|325_1   3 AAELAKAEASIKQAQAELAKMKAELAQEKAKSSNLAMDLEEARTKKGWL 51 
                5799999************************************999866 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.9   0.00021      0.32     129     178 ..       3      52 ..       1      57 [. 0.79

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00021
  PF04156.9 129 eerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlq 178
                +++l ++e sik++++e++++ +e+ ++k+++ +l  +le+ ++ + +l 
  MMETSP1325-20131115|325_1   3 AAELAKAEASIKQAQAELAKMKAELAQEKAKSSNLAMDLEEARTKKGWLX 52 
                56788888888888888888888888888888888888888888888875 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.5     0.001       1.6      21      56 ..       8      39 ..       2      51 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.001
  PF04977.10 21 qlkqeiaalqaelaklkaeneeLeaevkdLksdedy 56
                + ++ i++ qaelak+kae ++ +a+ ++L     +
   MMETSP1325-20131115|325_1  8 KAEASIKQAQAELAKMKAELAQEKAKSSNLA----M 39
                4566677777777777777777777666663....3 PP

>> PF14346.1  Domain of unknown function (DUF4398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   8.4     0.004       6.1      52      97 ..       4      47 ..       1      58 [. 0.62

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.004
  PF14346.1 52 AkaalaegkyeeArrlaeqAeadaelAeakaeaakaqaalaeaeds 97
               A+ a ae+  ++A  +ae A+ +aelA++ka++++ +++l+ea+++
  MMETSP1325-20131115|325_1  4 AELAKAEASIKQA--QAELAKMKAELAQEKAKSSNLAMDLEEARTK 47
               4444555555554..4666666677777777777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1086  (0.0794324); expected 273.4 (0.02)
Passed bias filter:                      850  (0.0621709); expected 273.4 (0.02)
Passed Vit filter:                       164  (0.0119953); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.50u 0.41s 00:00:00.90 Elapsed: 00:00:00.63
# Mc/sec: 452.65
//
Query:       MMETSP1325-20131115|316_1  [L=492]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-64  218.2   0.1    1.6e-64  217.7   0.1    1.1  1  PF00294.19 pfkB family carbohydrate kinase


Domain annotation for each model (and alignments):
>> PF00294.19  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.7   0.1   1.2e-68   1.6e-64      12     297 ..      55     356 ..      51     359 .. 0.94

  Alignments for each domain:
  == domain 1    score: 217.7 bits;  conditional E-value: 1.2e-68
                 EECEECHCCH...S..B-E-SEEEEE------HHHHHHHH--...--EEEEEEE--TT.-HHHHHHHHTTTEEETTEEESSS-EEEEEEEEE-TTCEEEEEEE---GGGHHHHHH....HHCHCHHTTEEEEHHEEE-SSSHHHHHHHHHHHHHHTT.EEECCCCCT--...HHCHHHHCSEESEECCCHHHHHHHCCSSH.....HCHHHHHHHHHHHHH-T-SEEEEB------EEEESS--EEE--....-SS--SB-TT---TTT--HHHHHHTT--HHHHHHHHHHHHHHHHT----GGG CS
  PF00294.19  12 idliardekl...ekelvevktvekgaGGagaNvavalarlg...gevafigavGddkfgeflleelkkegvdtdyvkideetrtglalilvdgdgertivfnrgaaadltpeel....pedllaeadvlylsgallseplpeatlealieaaknngkfdpnlrdplwsq.aleklrellpladilkpNeeEaealtgekd.....ndveevlaalhklkakgaktvvvtlGkdGallvekdgevhvppv...pkvkvvDttGAGDafvagflagllagksleealrlanavaalvvqkagaiss 297
                  d+i+++ek+   +kelv + +v++ aGGa++N++++ +++    g ++++g++Gdd fg+++++e ++ g +++y++ d e+ tg++++lvd++ger++v+n++aa++++ ++l    + + +++a+++y++g ++ +++  ++ +  ++a +n++ +++nl++p++ q + ++l +++p++di+++Ne+Eaea+ ++ +      ++++ ++al+k    + +tv++t+G d +++++ dgev + pv   pk+k vDt+GAGDafv+gf+++l++g++l++++ ++++++ +++q++g++ +
   MMETSP1325-20131115|316_1  55 GDAILAEEKHqpvFKELVDEYQVKYIAGGATQNSCRVCQWMTgvpGATSYFGCIGDDAFGKQMADEAAAIGMNVQYLV-DPEQVTGTCAVLVDPTGERSLVTNLAAANHFKATHLedpaQASVIEKAQYYYMAG-FFLTVSLPSIEAIGRHAVENKKLVMMNLSAPFIVQfFWDQLNAAMPYVDIMFGNESEAEAFGEKMGwgkdiPTIAQGISALPKASGFRGRTVIITQGCDSTIVAK-DGEVLTFPVtvlPKEKLVDTNGAGDAFVGGFMSQLIKGEPLAKCVDAGHWASTVIIQESGCTYP 356
                 589999************************************9***********************************.6667***************************************************.*******9***************************************************987777788888************777777***************6.444444444457*************************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.38s 00:00:01.17 Elapsed: 00:00:00.72
# Mc/sec: 1637.51
//
Query:       MMETSP1325-20131115|327_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.6    7.7   5.8        1.5    7.8   4.0    1.1  1  PF04641.7 Replication termination factor 2
        5.6    5.0   7.7        5.2    5.1   5.3    1.1  1  PF06375.6 Bovine leukaemia virus receptor (BLVR)
        6.5    6.6  15.1         25    4.7   7.9    2.0  2  PF11169.3 Protein of unknown function (DUF2956)


Domain annotation for each model (and alignments):
>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   4.0   0.00032       1.5     190     226 ..       2      38 ..       1      77 [. 0.50

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00032
  PF04641.7 190 kkkkkkkkkkkaeakgekaeaeaksksskeesskagk 226
                kkkkkkkk++++ + ++ +++++ks++ + e+++a++
  MMETSP1325-20131115|327_1   2 KKKKKKKKRTEDGEGERRRKKTTKSEARAAEEQDAKE 38 
                3333333444333333333333333332222222221 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.3    0.0011       5.2     279     325 ..       3      48 ..       1      75 [. 0.53

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0011
  PF06375.6 279 ktkkkkqrkekeekkkkkkkskkrchqseeaaeesvqngal.eeeplp 325
                k+kkkk+r e  e+++++kk+ k   ++  a e+  +++a+    p p
  MMETSP1325-20131115|327_1   3 KKKKKKKRTEDGEGERRRKKTTKS--EARAAEEQDAKEAAVnARRPAP 48 
                122222222222333333333322..3333334455555553344444 PP

>> PF11169.3  Protein of unknown function (DUF2956)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   7.9    0.0054        25      40      76 ..       2      38 ..       1      48 [. 0.53
   2 ?    3.7   0.0     0.012        53      30      50 ..      56      76 ..      54      79 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0054
  PF11169.3 40 kkqqkakaReadkarkkqlkakqkeaeeeeeeeeeee 76
               kk++k+k+R +d +  ++ k+++k++++++ee++ +e
  MMETSP1325-20131115|327_1  2 KKKKKKKKRTEDGEGERRRKKTTKSEARAAEEQDAKE 38
               8889999998886655554444444443333333222 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.012
  PF11169.3 30 qGiekGiaeykkqqkakaRea 50
                Gi  G a y+ q+++ ++e 
  MMETSP1325-20131115|327_1 56 SGISEGAARYRAQRRRNEKEI 76
               59*********9998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1224  (0.089526); expected 273.4 (0.02)
Passed bias filter:                      819  (0.0599035); expected 273.4 (0.02)
Passed Vit filter:                       118  (0.00863078); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.43s 00:00:00.86 Elapsed: 00:00:00.71
# Mc/sec: 270.01
//
Query:       MMETSP1325-20131115|326_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-40  137.0   0.0    5.1e-40  136.6   0.0    1.2  1  PF00406.17 Adenylate kinase
    1.9e-06   27.3   0.0    4.2e-06   26.1   0.0    1.6  1  PF05191.9  Adenylate kinase, active site lid
     0.0049   16.6   0.9       0.21   11.3   0.0    2.5  3  PF13671.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00406.17  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.6   0.0   1.1e-43   5.1e-40      24     148 ..       2     155 ..       1     158 [. 0.97

  Alignments for each domain:
  == domain 1    score: 136.6 bits;  conditional E-value: 1.1e-43
                 EEE---HHHHHHHCT-----HHHHHHHTT----HHHHHHHHHHHHHSH.CGH-EEEEE----SHHHHHHHHHHHHCTT-EESEEEEEE--HHHHHHHHHH................................GSHHHHHHHHHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00406.17  24 hlstGdllRaevksgtelGkeakevmdkgelvpdevvvklvkerleqk.dkkkgflldgfPRtveqaealeelleeekvkldlvleldvpeevlveRllk................................DneetvkkRletykkqtepvidyykk 148
                 hlstGdllRa+vk+g++lGkeak +md g+lvpd++v++l+ e+l+++  ++kg+lldgfPRt +qa+al +    +++++d++++l+vp+++lveR+++                                D+e++v+ Rle++++++++v+d+yk+
   MMETSP1325-20131115|326_1   2 HLSTGDLLRAAVKAGSDLGKEAKGYMDSGKLVPDQLVIDLIAEKLKSTdCQEKGWLLDGFPRTAAQAKALAD----TGAEVDCFISLNVPDDALVERVVGrrtdpetgviyhmtfnpppegeiadrvtqrsdDTEDKVRVRLEQFHANVNAVVDFYKN 155
                 9**********************************************9445689****************99....9*******************************************************************************97 PP

>> PF05191.9  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   9.3e-10   4.2e-06       1      36 []      98     129 ..      98     129 .. 0.97

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 9.3e-10
                -EEES----EEBTTTB--S-----S-----EE--TT CS
  PF05191.9   1 RrvCpdCGrvYhikfnpPkvdgvCDkCgepLiqRkD 36 
                Rr++p++G +Yh +fnpP + ++ D    +++qR+D
  MMETSP1325-20131115|326_1  98 RRTDPETGVIYHMTFNPPPEGEIAD----RVTQRSD 129
                9************************....9999998 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.01        46      90     124 ..      69     104 ..      60     107 .. 0.80
   2 !   11.3   0.0   4.7e-05      0.21      96     135 ..     105     144 ..     102     150 .. 0.85
   3 ?   -2.5   0.0      0.84   3.8e+03     111     111 ..     194     194 ..     159     211 .. 0.57

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.01
  PF13671.1  90 klakrlgvpvri.vylevpeetlreRlakRerngdd 124
                k++ + g++v + + l+vp++ l eR+  R+ + ++
  MMETSP1325-20131115|326_1  69 KALADTGAEVDCfISLNVPDDALVERVVGRRTDPET 104
                445578899888688***************998665 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 4.7e-05
  PF13671.1  96 gvpvrivylevpeetlreRlakRerngddrsevpeealdr 135
                gv +++ +  +pe ++++R+ +R+++ +d+++v +e++++
  MMETSP1325-20131115|326_1 105 GVIYHMTFNPPPEGEIADRVTQRSDDTEDKVRVRLEQFHA 144
                66667777788999*********************99986 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 0.84
  PF13671.1 111 l 111
                +
  MMETSP1325-20131115|326_1 194 W 194
                1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.61
# Mc/sec: 895.69
//
Query:       MMETSP1325-20131115|329_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.72
# Mc/sec: 1011.80
//
Query:       MMETSP1325-20131115|328_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.4   5.6      0.044   13.4   3.9    1.2  1  PF01456.12 Mucin-like glycoprotein


Domain annotation for each model (and alignments):
>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.9   3.2e-06     0.044      63     112 ..      47      94 ..       3      97 .] 0.73

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.2e-06
  PF01456.12  63 tasttittkttkattttttttttttateaPsdavttaeaPtttttrapsr 112
                    + ++ kt +a++++t ++ +++a eaP+   ++ eaP++ ++ ap+ 
   MMETSP1325-20131115|328_1  47 KMVADTQGKTEEAPAAATEEAPAAAAEEAPA--AAAEEAPAAAEAEAPAA 94 
                 2333446789999999999999999999999..77889999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       666  (0.0487127); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 407.80
//
Query:       MMETSP1325-20131115|332_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.75
# Mc/sec: 329.10
//
Query:       MMETSP1325-20131115|334_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   12.4   0.0       0.11   12.0   0.0    1.3  1  PF13342.1 C-terminal repeat of topoisomerase


Domain annotation for each model (and alignments):
>> PF13342.1  C-terminal repeat of topoisomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   8.2e-06      0.11      14      42 ..      28      56 ..      22      57 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.2e-06
  PF13342.1 14 kklseeqvkeLlekgktgllkGFkSKkGk 42
               k +++    eLl+ g tg+++G++ K+++
  MMETSP1325-20131115|334_1 28 KLVEQGSPDELLARGATGIFSGMVKKAKR 56
               5556666689****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 247.90
//
Query:       MMETSP1325-20131115|335_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.7    7.2   5.6        5.6    6.6   0.2    2.4  2  PF12555.3 Thiamine pyrophosphokinase C terminal


Domain annotation for each model (and alignments):
>> PF12555.3  Thiamine pyrophosphokinase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2   0.00041       5.6       9      25 ..       9      25 ..       8      25 .. 0.91
   2 ?    2.3   0.7    0.0088   1.2e+02      22      36 ..      74      88 ..      72     101 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00041
  PF12555.3  9 srisgkallllvlAaLv 25
               +r+s++a+l l+l++ v
  MMETSP1325-20131115|335_1  9 HRSSTRAWLALLLSVTV 25
               79***********9876 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.0088
  PF12555.3 22 AaLvAlavallispv 36
               A+L++++v++ ++ +
  MMETSP1325-20131115|335_1 74 AILFPIGVVVGANAP 88
               99999*999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.61
# Mc/sec: 636.41
//
Query:       MMETSP1325-20131115|333_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00036   20.1   0.0     0.0008   19.0   0.0    1.5  1  PF01042.16 Endoribonuclease L-PSP


Domain annotation for each model (and alignments):
>> PF01042.16  Endoribonuclease L-PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   5.8e-08    0.0008       9     117 ..      51     183 ..      44     186 .. 0.68

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 5.8e-08
                 TT-BSEEEETTEEEE----SB-T...............TS-B--SSHHHHHHHHHHHHHHHHHH.TT--GGG...EEEEEEEESSGGGHHHHHHHHHHHSSSS.....-.S.-EEEEEE-SB-GGG-SEEEEE CS
  PF01042.16   9 apYsqavkagnlvyvsGqlpldp..............etgelveedveeqtrqalenlkavLaa.agaslsd...vvkvtvFladiedfaevnevyneafdee.....k.saParsavevaaLpkgakvEiea 117
                  +Y++a + g+ +y+  +++ d+              e  e+++e++e  +r+a  +l  +L+   + +l++   v+kv   ++  +df+   +v+n+ +d       + + +ar++ +  +Lp  +  E+ +
   MMETSP1325-20131115|333_1  51 WSYVKAQRDGDKLYIGDHVGQDEsavtvrgkvgeegmEGAEVTPEEAEMLARNAGLRLLSTLSHyLDGDLDRvdqVIKVVGIVNGTPDFRGHGKVINGCSDVLvevlgDrGKHARTCTGSGSLPAAVTCEMVV 183
                 566666666666666666666666666444444433333344466666666666555555554423444444777**************************99888763689************888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 962.75
//
Query:       MMETSP1325-20131115|338_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.66
# Mc/sec: 515.58
//
Query:       MMETSP1325-20131115|336_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       623  (0.0455676); expected 273.4 (0.02)
Passed bias filter:                      485  (0.035474); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.86
# Mc/sec: 476.48
//
Query:       MMETSP1325-20131115|340_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.79
# Mc/sec: 388.27
//
Query:       MMETSP1325-20131115|341_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.65    9.0   7.3       0.64    9.0   5.1    1.0  1  PF11593.3 Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   5.1   4.7e-05      0.64     163     198 ..      40      77 ..       9      79 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 4.7e-05
  PF11593.3 163 a..PnatagvGsaattaaisattattptttakkprkpr 198
                   P +t+++ +++tta++s t ++t+ tt+   r pr
  MMETSP1325-20131115|341_1  40 RglPPSTTTITTTTTTASTSGTSSSTSSTTVPGTRCPR 77 
                155999*************************9999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       539  (0.0394236); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.75
# Mc/sec: 255.61
//
Query:       MMETSP1325-20131115|337_1  [L=755]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.8e-59  200.4  44.6    4.5e-42  143.8  13.0    3.2  4  PF04515.7 Plasma-membrane choline transporter


Domain annotation for each model (and alignments):
>> PF04515.7  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   1.7     0.067   9.1e+02     258     321 ..     197     259 ..     191     265 .. 0.52
   2 ?    0.1   2.3     0.017   2.3e+02      48     111 ..     238     312 ..     223     316 .. 0.37
   3 !   69.2   5.2   1.6e-23   2.2e-19       2     140 ..     305     481 ..     304     496 .. 0.87
   4 !  143.8  13.0   3.3e-46   4.5e-42     154     330 ..     530     716 ..     523     718 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.067
  PF04515.7 258 vlflgkllvsaltgllaylllkktkpkedlnyyavpvilvfiiayliasvffs.vyesavdtlfv 321
                +   +k + s+l+ +++ l+++++  +  +   av ++++f+ +yl++   ++ v+ s++   f 
  MMETSP1325-20131115|337_1 197 ITGNSKSATSYLADFISDLVVSRN--AIFGFGFAVALMVAFLYSYLMTLGLVDcVVWSCILITFA 259
                555555555555555555555532..333344455566667777777644333145555555554 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.017
  PF04515.7  48 piltfvlllafivlwivvavalytsgepkeknsskstsege.............ssgvevkldkklilllvyllfgl 111
                ++l+++ l+ ++v++++ ++++   g   +  ++ ++ +++             +  ++ +++ + +++  y++fgl
  MMETSP1325-20131115|337_1 238 SYLMTLGLVDCVVWSCILITFALFFGLGGYMYYTYQQWDAAncdgdddactgkgV--AHSDTEINGMMYTSYVFFGL 312
                4444444444444433333332222222111111111111111222344344232..22333334444455555554 PP

  == domain 3    score: 69.2 bits;  conditional E-value: 1.6e-23
  PF04515.7   2 vaiiltilalvlllliiflrkRirlaiallkeaskavskvpslvlvpiltfvlllafivlwivvavalytsgepkeknsskstsege.......................................ssgvevkldkklilllvyllfgllWtsevikavsqvtiagvvaswYfagkkr 140
                ++++++ la++ + +ii+++++irla+a +k+a +av+++p ++++p++ ++ l++f+v w++ + ++ ++g +  +ns   + +++                                        ++++ +l + + l+   ++f+++Wt+++i a++q+++a +++ wYf+g ++
  MMETSP1325-20131115|337_1 305 TSYVFFGLAALWAAFIICICSKIRLACAFVKVAGTAVRDMPIVLFFPVVQILGLVLFLVPWMYYMAYVHSQGAFLCENSCVGQ-SYCnglkdgktydcvqasgnflecidekcdgrmmptnttkytWEWADASLGSDQDLASTWMMFSYFWTTQFIVAMGQLVMAMTFVLWYFSGFDE 481
                56788889999999**********************************************************99888775554.4445999*********************9999999886665544445555559999999******************************98765 PP

  == domain 4    score: 143.8 bits;  conditional E-value: 3.3e-46
  PF04515.7 154 altyslGSiafGSLivaiiqliRilleylneklkeae....nklvkfllcclkcclwclekfvkflNrnAYvmiaiyGksFctsAkdafellkrnglralvldkltdfvlflgkllvsaltgllaylllkktkp......kedlnyyavpvilvfiiayliasvffsvyesavdtlfvcfaedpele 330
                ++ y++G++a GSL++aiiq+iR ++  ++ + +++     +++++++lcc++ccl clek++kf+N+ AY+++a+ +k+Fct+A++ f l++rn+  +++l  + +f +++gk+l++++tg l+y++++          +++ n+ + p+++v+i+ay++a +f++ y++a d +  c++ d+e +
  MMETSP1325-20131115|337_1 530 LVLYHVGTAAAGSLVIAIIQTIRYIVTKIQAQCNKSLtgtaKTIANIVLCCIQCCLYCLEKCMKFINKHAYIITAVKSKGFCTAACESFWLIVRNIRLIAALTMVQEFSIIVGKFLIVMATGALSYMFMQSVADengktvADKTNSLIGPTLFVMILAYFMADMFLNTYSMAMDVMMHCYVSDKEAN 716
                678*************************999988877788899***************************************************************************************877789999999999999***********************************8865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (755 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       818  (0.0598303); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.14u 0.34s 00:00:01.48 Elapsed: 00:00:00.94
# Mc/sec: 1924.73
//
Query:       MMETSP1325-20131115|344_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.65
# Mc/sec: 328.12
//
Query:       MMETSP1325-20131115|342_1  [L=271]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-25   89.2   0.0    3.8e-25   88.9   0.0    1.0  1  PF12697.2  Alpha/beta hydrolase family
    2.4e-10   40.2   0.0    2.8e-10   40.0   0.0    1.1  1  PF00561.15 alpha/beta hydrolase fold
    9.2e-10   38.3   0.0    1.6e-08   34.2   0.0    2.0  1  PF12695.2  Alpha/beta hydrolase family
     0.0017   18.0   0.0     0.0045   16.6   0.0    1.8  2  PF12146.3  Putative lysophospholipase


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.9   0.0   1.1e-28   3.8e-25       3     227 ..      15     264 ..      13     265 .. 0.78

  Alignments for each domain:
  == domain 1    score: 88.9 bits;  conditional E-value: 1.1e-28
                E------------HHHHHH.TTTSEEEEE-----------S...S--HHHHHHHHHHHHHH--.--EEEE--------HHHHHH----...EEEEEEE------STT---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH..........--GGGG....GG........................------HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTT......EEEEE---SSSS-...-HHHHHH CS
  PF12697.2   3 llHGlggsaeswrplaeaL.aagyrvvapDlpGhGrSdrppdydpdtledlaadlaalldalglrpvvlvGHSlGgavalaaaarrpd..lvrglvlidppgplpasalrpagpsllrrllagraaalrdlaarafarlfdgdelealvra..........daaalaellraa........................lldadlrealarldvPvlviageaDrvvppeearrlaealpg......arvvvlpgagHllfleapdevae 227
                + HG+++s+++w+ ++ +L ++g+r  a+ + G+G+S++p+++  +++ d+aa+l+a+++   ++ ++l  H++G +++l +++++ +  ++++ v+i+  + l      +       ++ a++   l d++++ f  l+++++l++ +++          +        ++                         + ++++ + +++ +vP+ +++g +D+v+++e  ++l++ +        a+++ ++ ++H+l+ ++p+eva+
  MMETSP1325-20131115|342_1  15 ISHGFPTSSFDWQDVVGELeQNGWRACAIYFVGFGFSEKPRSPFVYSMYDQAAALHAFIKGKSITNFTLASHDMGDSIGLIFLQQYASehKIKKHVVINGSLKL-----SY------ANITAMQKLLLDDVTGPVFENLLPAPVLAQGLASsvftpsagvqY-------GHELatvlefedgigvmhdtiqylnereQYEDEWLDTWSKSTVPCSLVWGQQDPVATAELGDYLWNNILEnrtsapADYEKVESGNHYLQGDHPAEVAR 264
                67*****************558*******************877899**************************************88778************43.....43......344444444455666666666666666666665555532222231.......222233333334445555555555555878888889****************************9876433555568********************98 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   0.0   8.2e-14   2.8e-10       9     228 ..      46     266 ..      38     268 .. 0.88

  Alignments for each domain:
  == domain 1    score: 40.0 bits;  conditional E-value: 8.2e-14
                 -------.E...S.GGGGSHHHHHHHHHHHHHHSTSSSEEEEE-B---HHHHHHHHHCGG..GEEEEEEESB--HHSHCSHSTTCHCHHHHHHHHCCHHHHHHHHHHHCSCCCHHHCHHHHHHCHCCCCCHHHHHHHHHTECCHCCHCCEC...HCHHHHHHHHHCCHHHT-TSSEEEEECCTTSCCHHCHHHHHHHCSTT......EEEEEETTHHCSHHHHSCHHHHHHH CS
  PF00561.15   9 rGvgySs.paggpelphyttddlardleavldalglkkltlvGhSmGGmialayaaeypd..rvkamvllgtvavlsdglssdvlnrgstltlladnvagrlskgikplqgdasvqaqsllrpqvtdflkrfdansyaregetraldgkll...aalgrdlvwdvtetlktilvptlvisgtdDplvpykaseklaelipk......sqlvvidgpgHlafldkpdeinkli 228
                  G+g+S  p   +    y + d a++l+a+++   ++++tl  h+mG  i+l ++++y +  ++k+ v ++ +      ls + +   ++++ll+d v+g  + +  p+   a + a s+++p  ++ ++   + ++  e+e+ ++ ++++    ++   +++++  t ++++vp  +++g++Dp+ + + +  l ++i        + +++++++ H ++ d+p e+++ i
   MMETSP1325-20131115|342_1  46 VGFGFSEkP---RSPFVYSMYDQAAALHAFIKGKSITNFTLASHDMGDSIGLIFLQQYASehKIKKHVVINGS----LKLSYANIT--AMQKLLLDDVTGPVFENLLPAPVLAQGLASSVFTP--SAGVQYGHELATVLEFEDGIGVMHDTiqyLNEREQYEDEWLDTWSKSTVPCSLVWGQQDPVATAELGDYLWNNILEnrtsapADYEKVESGNHYLQGDHPAEVARVI 266
                 69*****77...999*********************************************************4....788877777..5******************999999999*******..8888888888888888999999999998544445566677777788**************99999999955555557999999********************9987 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   4.8e-12   1.6e-08       3     142 .]      14     253 ..      12     253 .. 0.66

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 4.8e-12
  PF12695.2   3 vlvhGaggdssayeplaealakrgfavvavdlpghgasegaa............aakrvlaadlldleriilvGhSlGGgvalelag....................................rddrvkglvllapfpdgedlakltl........................................................................pvllihGtrDgvvppeeaeklakalp.....gdaelvviegasHf 142
                +++hG+  +s ++++++ +l ++g++  a+ + g g se+ +            a+ +++ +++  + +  l+ h +G +++l + +                                                                                                                                     p+ l++G++D v+++e  ++l++++      ++a++  +e ++H+
  MMETSP1325-20131115|342_1  14 IISHGFPTSSFDWQDVVGELEQNGWRACAIYFVGFGFSEKPRspfvysmydqaaALHAFI-KGK-SITNFTLASHDMGDSIGLIFLQqyasehkikkhvvingslklsyanitamqklllddvT-----------------------GpvfenllpapvlaqglassvftpsagvqyghelatvlefedgigvmhdtiqylnereqyedewldtwskstvPCSLVWGQQDPVATAELGDYLWNNILenrtsAPADYEKVESGNHY 253
                89****************************999999995555556666554444666666.543.77899999999999999988885554555555555555555555555555555555550.......................0555555555555555555555555555555555555555555555555555555555555555555555555**************9999997777554444588899999999996 PP

>> PF12146.3  Putative lysophospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.3e-06    0.0045      17      62 ..      11      56 ..       4      74 .. 0.86
   2 ?   -3.0   0.0       1.7     6e+03       4      21 ..      95     112 ..      95     114 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.3e-06
  PF12146.3 17 aavvlvhglaEhsgrYqelaedLaaqGyavyayDhrGhGksegerg 62
               ++ +++hg+  +s  +q+++ +L ++G++ +a+   G+G se+ r 
  MMETSP1325-20131115|342_1 11 KTTIISHGFPTSSFDWQDVVGELEQNGWRACAIYFVGFGFSEKPRS 56
               67799************************************98775 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 1.7
  PF12146.3   4 lfyrrwlpeeppkaavvl 21 
                +f++++  e++ k+ vv+
  MMETSP1325-20131115|342_1  95 IFLQQYASEHKIKKHVVI 112
                678888888887777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.65
# Mc/sec: 999.10
//
Query:       MMETSP1325-20131115|346_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.1e-11   41.6   0.1    6.7e-11   41.4   0.0    1.1  1  PF08561.5 Mitochondrial ribosomal protein L37


Domain annotation for each model (and alignments):
>> PF08561.5  Mitochondrial ribosomal protein L37
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   4.9e-15   6.7e-11      19      84 ..      19      85 ..       3      86 .] 0.82

  Alignments for each domain:
  == domain 1    score: 41.4 bits;  conditional E-value: 4.9e-15
  PF08561.5 19 ifkdkaDpvaleDseYPeWLwkllddaskaske.aeadkaaekreerrkalrkarkaaIkenNflsk 84
                + + ++  +++D+eYP+WL ++ld  s a+ + ++a+    + ee+r++++k r a+Ike N++++
  MMETSP1325-20131115|346_1 19 FRVQAPEATIKPDDEYPDWLADVLDIPSLAELTaKRAEGLPLTPEESRRFWQKTRTARIKETNQIQE 85
               55678999*****************9987765404455456799*******************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.68
# Mc/sec: 303.07
//
Query:       MMETSP1325-20131115|345_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-11   44.0   0.0    2.3e-11   43.3   0.0    1.4  1  PF00466.15 Ribosomal protein L10


Domain annotation for each model (and alignments):
>> PF00466.15  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   1.7e-15   2.3e-11       2      87 ..      27     113 ..      26     127 .. 0.89

  Alignments for each domain:
  == domain 1    score: 43.3 bits;  conditional E-value: 1.7e-15
                 -HHHHHHHHHHHHHHHCTTSEEEEE------HHHHHHHHHHHHHH--EEEEE-HHHHHHHHHHTT-..--G...GGG---EEEEEE--- CS
  PF00466.15   2 tkekKeelvkelkellkkyssvlvvdydgltvkqlqelRkelrekgaelkvgkntlmkrAlektgeeeklk...ellkgptaliftned 87 
                 t++ Ke+ v+ +ke l+ +  ++ +  +glt  q+++lR+++ e+  ++ v+kntl+++A++++++e +l+    l + +++++f+ ed
   MMETSP1325-20131115|345_1  27 TRAGKEAKVAAMKEHLERSMLIFAIPGAGLTYPQVSALREKMPES-TTVSVCKNTLIELAVQDSEWE-CLAgdeTLTTLENMWFFVGED 113
                 89******************************************9.********************6.864333777999*****9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.62
# Mc/sec: 800.07
//
Query:       MMETSP1325-20131115|347_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-15   54.8   6.0    8.4e-15   54.4   4.2    1.1  1  PF00001.16 7 transmembrane receptor (rhodopsin family)


Domain annotation for each model (and alignments):
>> PF00001.16  7 transmembrane receptor (rhodopsin family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   4.2   6.1e-19   8.4e-15      70     236 ..       1     152 [.       1     176 [. 0.83

  Alignments for each domain:
  == domain 1    score: 54.4 bits;  conditional E-value: 6.1e-19
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTT---HHHHHTTTSSSHHHHHTTTT---XXXX.XX CS
  PF00001.16  70 asillltaisiDRYlaitrplkykrkrtkrraavlillvWllsfllslpplllswsnteeeeeataclisfpsekersytllstlvafvlpllvilvlylriyralrkrakklaskrsskrkkslkkekkaaktlliivlvfilcwlPffilvllntlcksselvpe 236
                 as+l+ t+i+ +RY+ ++ pl++ + rt    ++l +++W+ + +ls + + ++  + +++     c+ +f +       l++t v+ ++pl    +ly +i+r+l++  ++         +   + e  +a  +l+i+ +f+ cw+P  i +++ +l   ++  ++
   MMETSP1325-20131115|347_1   1 ASCLIFTLIAHERYVKVATPLRALQERT---LTALYVACWATAGVLSGLNFWVGGYHVVPSG--LYCITDFSQV----GSLMLTAVSVMVPLGASNYLYSKIIRQLHALGRSRVD-----GHIATRTEAIIAMKMLVIMAAFVACWTPATIWMCWVALGLPNSD-HP 152
                 799*********************9999...899999*************777666666655..9999999999....6*****************************9997654.....56888888888888999******************999988832.23 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.52s 00:00:00.93 Elapsed: 00:00:00.65
# Mc/sec: 1128.13
//
Query:       MMETSP1325-20131115|349_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-28   97.4   0.0    1.3e-27   96.8   0.0    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.8   0.0   9.3e-32   1.3e-27       9     152 ..      49     199 ..      43     202 .. 0.74

  Alignments for each domain:
  == domain 1    score: 96.8 bits;  conditional E-value: 9.3e-32
                 XXXXXX.XXXXXX.---...-TTTTT--------TTT------------------S--TT--...STT--.-...--.--S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT---- CS
  PF00504.16   9 lpgdlg.fDplglskdp...tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpa..waeag.g...ls.lptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfv 152
                 +  ++g fDplglsk     +++r+r +E++HGRv+M+a+lG+++++ +++++++ +  + p+  +++   g   +  +p+++++qil ++g+lel   + +  +   g+ + + pGg+     g    ++e+ a++ + E++nGRlAM+a++g++
   MMETSP1325-20131115|349_1  49 VLRPVGfFDPLGLSKGIdeeKFNRWRTVEIKHGRVCMMAFLGFIWQQGVGHFPGYIS--HSPDlkFSDIPdGvaaIGaVPGVGWAQILWFCGLLELGMFSVKT-QRAPGAFNFYRPGGPELG--GYPgVTDENRAQKLTIELQNGRLAMLAVIGIL 199
                 5678999*******755669***************************9999665443..33444355533223222259****************97555533.233334456667776333..3335567899999****************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.47s 00:00:00.87 Elapsed: 00:00:00.69
# Mc/sec: 771.00
//
Query:       MMETSP1325-20131115|351_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-22   79.0   3.2    1.2e-10   41.1   0.1    3.0  3  PF13857.1  Ankyrin repeats (many copies)
      1e-21   76.8   1.0    2.8e-11   43.4   0.2    2.0  2  PF12796.2  Ankyrin repeats (3 copies)
      2e-21   75.7   0.5    6.3e-11   42.3   0.0    2.3  2  PF13637.1  Ankyrin repeats (many copies)
    2.2e-17   61.7   2.1    2.5e-07   30.0   0.0    3.5  4  PF00023.25 Ankyrin repeat
    3.3e-14   51.4   0.5    0.00056   19.7   0.0    3.7  4  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.015   15.6   1.1        0.1   12.9   0.8    2.2  1  PF12815.2  Spt5 C-terminal nonapeptide repeat binding Spt4
        1.7    8.0   9.9        3.4    7.0   6.9    1.5  1  PF05403.6  Plasmodium histidine-rich protein (HRPII/III)


Domain annotation for each model (and alignments):
>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.1   6.1e-14   1.2e-10       6      52 ..       5      51 ..       2      53 .. 0.94
   2 !   29.2   0.1   3.5e-10   6.8e-07       9      52 ..      53      96 ..      51      96 .. 0.94
   3 !   18.6   0.0   7.6e-07    0.0015       2      33 ..      80     110 .]      79     110 .] 0.87

  Alignments for each domain:
  == domain 1    score: 41.1 bits;  conditional E-value: 6.1e-14
  PF13857.1  6 padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdglta 52
               p +++a d++g+tp h+Aak+g++ev++lL +++a+l++ d++g+t+
  MMETSP1325-20131115|351_1  5 PSSLDADDKHGRTPAHWAAKRGHVEVLQLLADKEACLDADDNYGRTP 51
               678999****************************************9 PP

  == domain 2    score: 29.2 bits;  conditional E-value: 3.5e-10
  PF13857.1  9 vnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdglta 52
               ++a d++++tp h+Aa gg++ v++lL +++a l++ d++++t+
  MMETSP1325-20131115|351_1 53 LDAVDNHNRTPAHYAAQGGHVAVFELLAEKEAQLYAVDEYNRTP 96
               578899999*********************************98 PP

  == domain 3    score: 18.6 bits;  conditional E-value: 7.6e-07
  PF13857.1   2 lehgpadvnatdeggntpLhlAakggalevvr 33 
                +e+  a++ a de+++tp h+Aa gg++e++r
  MMETSP1325-20131115|351_1  80 AEKE-AQLYAVDEYNRTPAHYAAQGGHVEMLR 110
                5666.778899*******************86 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   4.8e-12   9.3e-09      25      71 ..      10      60 ..       3      61 .. 0.87
   2 !   43.4   0.2   1.4e-14   2.8e-11      21      75 ..      57     109 ..      52     110 .] 0.90

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 4.8e-12
  PF12796.2 25 l....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrngh 71
                    g+tp h+Aa++g++e+++lL +++a ++a d++g+tp   Av n++
  MMETSP1325-20131115|351_1 10 AddkhGRTPAHWAAKRGHVEVLQLLADKEACLDADDNYGRTPALDAVDNHN 60
               2234489***************************************99876 PP

  == domain 2    score: 43.4 bits;  conditional E-value: 1.4e-14
  PF12796.2  21 advdlgetpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelv 75 
                ++   ++tp h+Aa+ g++++++lL e++a++ a d++++tp h+A++ gh+e++
  MMETSP1325-20131115|351_1  57 DNH--NRTPAHYAAQGGHVAVFELLAEKEAQLYAVDEYNRTPAHYAAQGGHVEML 109
                344..59**********************************************87 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.1   8.9e-13   1.7e-09       1      53 [.      15      79 ..      15      79 .. 0.82
   2 !   42.3   0.0   3.2e-14   6.3e-11       1      51 [.      60     110 .]      60     110 .] 0.97

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 8.9e-13
  PF13637.1  1 gltaLhyaaisgrlelvklLlekgid............inrtdesGntaLhiAalrgnieilklL 53
               g+t+ h+aa+ g++e+++lL +k +             ++++d+ ++t+ h+Aa++g++ +++lL
  MMETSP1325-20131115|351_1 15 GRTPAHWAAKRGHVEVLQLLADKEACldaddnygrtpaLDAVDNHNRTPAHYAAQGGHVAVFELL 79
               689******************877663344666666666666666777**************998 PP

  == domain 2    score: 42.3 bits;  conditional E-value: 3.2e-14
  PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilk 51 
                ++t+ hyaa+ g++ + +lL ek ++++++de+++t+ h+Aa++g++e+l+
  MMETSP1325-20131115|351_1  60 NRTPAHYAAQGGHVAVFELLAEKEAQLYAVDEYNRTPAHYAAQGGHVEMLR 110
                5899*********************************************96 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   1.3e-10   2.5e-07       1      33 []      14      46 ..      14      46 .. 0.96
   2 ?   -2.6   0.0       2.7   5.2e+03       2       5 ..      48      51 ..      47      58 .. 0.66
   3 !   18.3   0.0   6.4e-07    0.0012       2      32 ..      60      90 ..      59      91 .. 0.93
   4 !   11.7   0.0   8.3e-05      0.16       2      18 ..      93     109 ..      92     110 .] 0.89

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 1.3e-10
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                +G+TP H+Aa+rg++ev++lL ++ A+l+a d+
   MMETSP1325-20131115|351_1 14 HGRTPAHWAAKRGHVEVLQLLADKEACLDADDN 46
                7*****************************986 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 2.7
                SCBH CS
  PF00023.25  2 GfTP 5 
                G+TP
   MMETSP1325-20131115|351_1 48 GRTP 51
                7787 PP

  == domain 3    score: 18.3 bits;  conditional E-value: 6.4e-07
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                 +TP H+Aa+ g++ v +lL ++ A l a+d
   MMETSP1325-20131115|351_1 60 NRTPAHYAAQGGHVAVFELLAEKEAQLYAVD 90
                68********************999999988 PP

  == domain 4    score: 11.7 bits;  conditional E-value: 8.3e-05
                 SCBHHHHHHHTTHHHHH CS
  PF00023.25   2 GfTPLHlAalrgnlevv 18 
                  +TP H+Aa+ g++e++
   MMETSP1325-20131115|351_1  93 NRTPAHYAAQGGHVEML 109
                 58*************97 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   2.9e-07   0.00056       1      24 [.      14      37 ..      14      44 .. 0.89
   2 ?   -0.4   0.0      0.91   1.8e+03       1      12 [.      47      58 ..      47      60 .. 0.79
   3 !   16.3   0.0   3.7e-06    0.0072       2      29 ..      60      87 ..      58      88 .. 0.91
   4 !   11.2   0.0   0.00016      0.31       1      18 [.      92     109 ..      92     110 .] 0.92

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 2.9e-07
  PF13606.1  1 nGnTpLhlAasngrielveaLlen 24
               +G+Tp h+Aa++g++e++++L ++
  MMETSP1325-20131115|351_1 14 HGRTPAHWAAKRGHVEVLQLLADK 37
               69******************9775 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.91
  PF13606.1  1 nGnTpLhlAasn 12
               +G+Tp   A+ n
  MMETSP1325-20131115|351_1 47 YGRTPALDAVDN 58
               799*98888765 PP

  == domain 3    score: 16.3 bits;  conditional E-value: 3.7e-06
  PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
               ++Tp h+Aa+ g+++++e+L e+ a+++
  MMETSP1325-20131115|351_1 60 NRTPAHYAAQGGHVAVFELLAEKEAQLY 87
               79********************999887 PP

  == domain 4    score: 11.2 bits;  conditional E-value: 0.00016
  PF13606.1   1 nGnTpLhlAasngrielv 18 
                +++Tp h+Aa+ g++e++
  MMETSP1325-20131115|351_1  92 YNRTPAHYAAQGGHVEML 109
                689*************98 PP

>> PF12815.2  Spt5 C-terminal nonapeptide repeat binding Spt4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.8   5.1e-05       0.1      32      57 ..      47      99 ..       4     107 .. 0.40

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.1e-05
  PF12815.2 32 gsrTPawgs...gskTPa........................feagsrTPayg 57
                +rTPa  +    ++TPa                        +++  rTPa+ 
  MMETSP1325-20131115|351_1 47 YGRTPALDAvdnHNRTPAhyaaqgghvavfellaekeaqlyaVDEYNRTPAHY 99
               33333333333333333333333333333333333333333333333333333 PP

>> PF05403.6  Plasmodium histidine-rich protein (HRPII/III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   6.9    0.0017       3.4      82     167 ..      17     102 ..       4     108 .. 0.30

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0017
  PF05403.6  82 adahhahhaadahhahhaadahhahhaadaahahhaadahhahhaadahhaadahhaayahh.ahhaadahhaadahhaadahhaad 167
                + ah a +  +       ad   +  a d      a da   h  + ah+aa+  h a     a + a+  +a d +  + ah+aa+
  MMETSP1325-20131115|351_1  17 TPAHWAAKRGHVEVLQLLADKEACLDADDNYGRTPALDAVDNHNRTPAHYAAQGGHVAVFELlAEKEAQL-YAVDEYNRTPAHYAAQ 102
                2222222222222222233333333333333333333333333333333333322222221112222222.2233333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.38u 0.44s 00:00:00.82 Elapsed: 00:00:00.77
# Mc/sec: 342.34
//
Query:       MMETSP1325-20131115|352_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 348.94
//
Query:       MMETSP1325-20131115|343_1  [L=478]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-07   29.2   1.9     0.0036   16.8   0.0    3.1  3  PF02146.12 Sir2 family
     0.0042   16.7   0.2       0.97    9.0   0.0    2.2  2  PF00205.17 Thiamine pyrophosphate enzyme, central domain


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.6     0.052   3.5e+02       1      11 [.     144     154 ..     144     163 .. 0.90
   2 !   16.8   0.0   5.3e-07    0.0036      59     106 ..     167     216 ..     157     222 .. 0.90
   3 !    9.0   0.0   0.00013      0.92     146     177 ..     223     255 ..     219     257 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.052
                 -----TT---- CS
  PF02146.12   1 GAGiStesGip 11 
                 GAGiS+++Gi 
   MMETSP1325-20131115|343_1 144 GAGISVAAGIG 154
                 9********95 PP

  == domain 2    score: 16.8 bits;  conditional E-value: 5.3e-07
                 ..S---HHHHHHHHHHH---EEEEEE--SS-HHHH----..SEEE----T CS
  PF02146.12  59 aeakpnaaHkflkklekkgkllrliTQNidnLekkaGsk..kvvelHGsl 106
                 ++a p+ +H +l  l ++g  ++   QN d+L +kaG+    + e+HGs 
   MMETSP1325-20131115|343_1 167 TDASPTFTHLALGALANAGYIHSWEQQNHDGLPQKAGVPqeILNEIHGSW 216
                 4799*********************************9876789****96 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.00013
                 S--B-----HHHHHHHH.HHHH-SEEEE----S CS
  PF02146.12 146 vvfFGealpeklkklle.kveeadlllviGtSl 177
                 vv +  +l+++  + +e +++eadl+lv+GtSl
   MMETSP1325-20131115|343_1 223 VVKYSGNLKDHNYEWMErDATEADLVLVLGTSL 255
                 566677888777777777**************8 PP

>> PF00205.17  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.1    0.0018        12       1      26 [.     126     151 ..     126     162 .. 0.86
   2 !    9.0   0.0   0.00014      0.97      73     115 ..     240     288 ..     213     305 .. 0.70

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0018
                 HHHHHHHHHH-SSEEEEE-CHHCHTT CS
  PF00205.17   1 ideaaellkaakrPvilvGggvrrse 26 
                 i+++a+ll+ ++r v++ G+g++ + 
   MMETSP1325-20131115|343_1 126 IEKLAQLLRISRRTVVYSGAGISVAA 151
                 789******************99764 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00014
                 HHHHH-SEEEEES--SSTTTT--.....CTCTTTCC..EEEEEESSCEE CS
  PF00205.17  73 eaieeaDlvlvlGarlsdvrttg.....psakfppaa.kiihvdidpae 115
                 +   eaDlvlvlG+ l   +  +      s+   +++  ++h++ ++ e
   MMETSP1325-20131115|343_1 240 RDATEADLVLVLGTSLGGLNADQiatncASRSCRRQSlGFVHINLQQTE 288
                 55689*********98886664433333333444445568888877755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.37s 00:00:01.19 Elapsed: 00:00:00.85
# Mc/sec: 1347.60
//
Query:       MMETSP1325-20131115|354_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 327.12
//
Query:       MMETSP1325-20131115|355_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-13   47.1   2.7    9.6e-13   47.1   1.9    1.8  2  PF02953.10 Tim10/DDP family zinc finger


Domain annotation for each model (and alignments):
>> PF02953.10  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   1.9     7e-17   9.6e-13       1      65 [.      63     126 ..      56     127 .. 0.97
   2 ?   -3.9   1.7      0.58   7.9e+03       2       9 ..     129     136 ..     128     138 .] 0.54

  Alignments for each domain:
  == domain 1    score: 47.1 bits;  conditional E-value: 7e-17
  PF02953.10   1 qkqlaqelelanaqelvnkltekCfkkCvtkypgseLskgeesCldrCvekyldvnnlvskrlqe 65 
                 q++++q ++ + +qe++nklte+ f++C++k p+s L ++e +C++  v k+ld++++v  r+q+
   MMETSP1325-20131115|355_1  63 QEMVQQLQQQQIIQEVMNKLTEASFDRCINK-PESGLGSSERQCINATVHKWLDTTQFVQGRFQR 126
                 78999**************************.****************************99996 PP

  == domain 2    score: -3.9 bits;  conditional E-value: 0.58
  PF02953.10   2 kqlaqele 9  
                 +q++q+++
   MMETSP1325-20131115|355_1 129 QQMQQQQQ 136
                 55555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1332  (0.0974254); expected 273.4 (0.02)
Passed bias filter:                      621  (0.0454213); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.43s 00:00:00.89 Elapsed: 00:00:00.70
# Mc/sec: 472.42
//
Query:       MMETSP1325-20131115|353_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.67
# Mc/sec: 565.11
//
Query:       MMETSP1325-20131115|358_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.42s 00:00:00.96 Elapsed: 00:00:01.00
# Mc/sec: 709.32
//
Query:       MMETSP1325-20131115|359_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.31s 00:00:00.74 Elapsed: 00:00:00.94
# Mc/sec: 382.40
//
Query:       MMETSP1325-20131115|357_1  [L=295]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-27   94.8   0.0    5.4e-27   94.4   0.0    1.1  1  PF00069.20 Protein kinase domain
    8.4e-10   38.0   0.0    1.1e-09   37.6   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.038   12.9   0.4      0.077   11.9   0.3    1.5  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
      0.078   12.2   0.0       0.13   11.5   0.0    1.3  1  PF10866.3  Protein of unknown function (DUF2704)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.4   0.0   1.6e-30   5.4e-27      56     257 ..      24     259 ..       6     260 .. 0.82

  Alignments for each domain:
  == domain 1    score: 94.4 bits;  conditional E-value: 1.6e-30
                 H-TTB--EEEEEEESTEEEEEEE--SC-...EHHHHHHHHCCB....-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E...........EE------EEE...CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST.............HHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTS CS
  PF00069.20  56 sHpnivkllevfeekdelylvleyvegg...dlfdllkkegkl....seeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel...........kiaDFGlakkl...eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge.............seedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkh 257
                 +Hp+i+ + ++ ++++++y+v+  + +    d  dll+++  l     +  ++++++ +l++l++lH +g++Hr +K+eN+L++ ++             +++ FG+++ +     +      lvg++ ++ PEv+ +  +++ k+DvWs++++l el++g+  f++e                d++e + + l++k+   ++  +++++++  + ++ l   p++R+taee+l++
   MMETSP1325-20131115|357_1  24 RHPHILYVDHALHSEQHVYMVMTQIGQRdraDALDLLTNNADLhdwsADSIVREVVRPVLSALSHLHARGFAHRNVKTENVLIEYRELAnnesrvqvtnvQLTGFGFCCSAvadPDPVLADAGLVGSPGFIDPEVMVRPVHDKVKSDVWSCACMLLELIKGRRWFRHEwqelfrqwwprnaLALDDHEQFTNLLDQKIADVYSACQTTQPRAAAVFRNALLLVPNARMTAEELLNE 259
                 6************************999444555566677777222244445555666789***********************666668999***************9987433333356789*************9999999******************999999888888888877755566666666666666666666667779***********************985 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   3.3e-13   1.1e-09      59     208 ..      24     190 ..       4     243 .. 0.72

  Alignments for each domain:
  == domain 1    score: 37.6 bits;  conditional E-value: 3.3e-13
                 -BTTB--BEEEBESSSSEEEEEE---B-...-HHHHHHHT.GTTGSBHHH.HHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...........TTEEEE-----CEESTTTSCE.EESTT-EECGGGS-HHHHHHSE.EEHHHHHHH---HHHHHHTTT-GTTTT CS
  PF07714.12  59 khpnivkllgvctkeepllivteyvkgG...dLlefLrkk.ekekltlkd.llkfalqiakGmeyLeskklvHrdLaarNvLlee...........ekvvkisDfGLardiekddyy.kkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEiftlgespypg 208
                 +hp+i+ +  +  +e+++++v+  + +    d l++L+++ + ++ + +  + +++  + +++++L+++ + Hr++ + NvL+e             + v+++ fG + +   d +   ++ +   +  ++ pE++ + +  ++ksDvWs  ++l E+++ g++ + +
   MMETSP1325-20131115|357_1  24 RHPHILYVDHALHSEQHVYMVMTQIGQRdraDALDLLTNNaDLHDWSADSiVREVVRPVLSALSHLHARGFAHRNVKTENVLIEYrelannesrvqVTNVQLTGFGFCCSAVADPDPvLADAGLVGSPGFIDPEVMVRPVhDKVKSDVWSCACMLLELIK-GRRWFRH 190
                 7************9999****999987623355566666633344444442457888999************************889999998886679999*****9888666555267777778999******988873679**************99.5444433 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   2.3e-05     0.077      97     155 ..      58     110 ..      30     122 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.3e-05
  PF06293.9  97 eklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeee 155
                  l++  dL ++ a      +++ r++++ v ++ + +h++g +H+     n+l++ +e
  MMETSP1325-20131115|357_1  58 DLLTNNADLHDWSA------DSIVREVVRPVLSALSHLHARGFAHRNVKTENVLIEYRE 110
                45778888888888......5999******************************99876 PP

>> PF10866.3  Protein of unknown function (DUF2704)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.8e-05      0.13      56     141 ..     163     255 ..     154     264 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.8e-05
  PF10866.3  56 lnmkeydevyslgrqlyeilrg..lfv...dePfklwleanaaelaadeefkdkilkilqeelklalad..lktntfknivlnvlnselsdda 141
                ++ k + +v+s +  l e+++g   f     e f+ w  +na  l+ +e+f++ + + + +   + +++    ++ f+n++l v n++++ + 
  MMETSP1325-20131115|357_1 163 VHDKVKSDVWSCACMLLELIKGrrWFRhewQELFRQWWPRNALALDDHEQFTNLLDQKIADVYSACQTTqpRAAAVFRNALLLVPNARMTAEE 255
                555677899999999999996522575222578********************99999999888877665567889******99999988665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.41s 00:00:01.03 Elapsed: 00:00:00.75
# Mc/sec: 942.57
//
Query:       MMETSP1325-20131115|360_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-05   24.1   5.0      0.023   14.1   0.1    3.5  2  PF00612.22 IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.069   13.2   1.5       0.51   10.4   1.0    2.1  1  PF08278.6  DNA primase DnaG DnaB-binding
       0.64    8.5   5.0       0.82    8.2   3.5    1.1  1  PF11498.3  Transcriptional activator LAG-3
        2.6    8.1   9.7       0.53   10.3   3.9    2.0  2  PF10187.4  N-terminal domain of NEFA-interacting nuclear protein NIP30
        9.6    5.4  12.9        2.3    7.4   6.9    1.5  2  PF09756.4  DDRGK domain


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.6   0.00018       0.5       7      20 ..      57      70 ..      57      71 .. 0.90
   2 !   14.1   0.1   8.6e-06     0.023       2      15 ..      89     102 ..      88     107 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00018
                HHHHHHHHHHHCHC CS
  PF00612.22  7 IQaawRgylaRkry 20
                +Q+ +Rg+l Rk+ 
   MMETSP1325-20131115|360_1 57 LQRLYRGHLGRKAA 70
                7***********85 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 8.6e-06
                 HHHHHHHHHHHHHH CS
  PF00612.22   2 kaaikIQaawRgyl 15 
                 ++ai++Q+++Rgy+
   MMETSP1325-20131115|360_1  89 ASAITMQRVFRGYV 102
                 79***********7 PP

>> PF08278.6  DNA primase DnaG DnaB-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.0   0.00019      0.51      32     125 ..      33     135 ..      18     137 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00019
  PF08278.6  32 glallrelvelcqenpaistgq..llehlrgtpeeellakLat.......wehlik.deedieqefddalarLqeqllerrieeLkaksrrsgLtdeEkqelre 125
                 +++ r+l e ++ ++  + ++  l   +rg+  +++ ++ a        ++ l++ +   +++ f++ + +L++  ++ ++++ +a  r ++  ++E +e+++
  MMETSP1325-20131115|360_1  33 RAEAARQLYEKVRREKMEKKASadLQRLYRGHLGRKAARRWAMkkaeleaMNALMNaSAITMQRVFRGYVGKLRASVVRAEMADFIAMIRMEEAAADE-EEYWR 135
                55666666666666332222223577777777777777777777777777778888888899****************************97766666.68886 PP

>> PF11498.3  Transcriptional activator LAG-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.5    0.0003      0.82      45     107 ..      27      91 ..      11     115 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0003
  PF11498.3  45 eelarlrselarekyekarqesiasqr.avtaqlfnrytedeerkrveqqk.nkeamnasvaaps 107
                + +a  r+e ar+ yek r+e + ++  a   +l++ +   +  +r   +k + eamna + a +
  MMETSP1325-20131115|360_1  27 RREAAERAEAARQLYEKVRREKMEKKAsADLQRLYRGHLGRKAARRWAMKKaELEAMNALMNASA 91 
                3455578999***********9987651455678887776666666655551679***9877543 PP

>> PF10187.4  N-terminal domain of NEFA-interacting nuclear protein NIP30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.9    0.0002      0.53       9      54 ..       6      54 ..       1      65 [. 0.69
   2 ?   -1.6   0.1      0.99   2.7e+03      13      20 ..     129     136 ..     117     172 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0002
  PF10187.4  9 earkrrdeelekare...eeeakaeeeeeydgksLyerLqenkekKqee 54
               e+r++ ++ + +a+     +++++  e++++++ Lye+ + +k++K+++
  MMETSP1325-20131115|360_1  6 ERRHELEKVMGRAKVgeeRKRRREAAERAEAARQLYEKVRREKMEKKAS 54
               444333333333332544667778889999***************9986 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.99
  PF10187.4  13 rrdeelek 20 
                 ++e +++
  MMETSP1325-20131115|360_1 129 DEEEYWRT 136
                33333333 PP

>> PF09756.4  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   6.9   0.00084       2.3      21     106 ..       2      88 ..       1      99 [. 0.78
   2 ?   -3.5   0.0       1.9   5.2e+03      65      76 ..     123     134 ..     118     143 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00084
                XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHH CS
  PF09756.4  21 reaeeeereerkkkeekreke.rkeeeekeeekekkkeeeerkeeeekerkeqeeyeklksefvveeegeekesseeeeklleefin 106
                r+aee+ +e  k++ + + +e rk ++e+ e++e++++  e+ ++e+ e+k + ++++l       + +  + +++ e + ++ ++n
  MMETSP1325-20131115|360_1   2 RAAEERRHELEKVMGRAKVGEeRKRRREAAERAEAARQLYEKVRREKMEKKASADLQRLYRGHLGRKAARRWAMKKAELEAMNALMN 88 
                788888888888887777765155667888888899999999999999**********99988888888888888887776666665 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 1.9
                XXXXXXXXXXXX CS
  PF09756.4  65 eekerkeqeeye 76 
                 e++++++eey 
  MMETSP1325-20131115|360_1 123 MEEAAADEEEYW 134
                455555556654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1072  (0.0784084); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.43s 00:00:00.96 Elapsed: 00:00:00.82
# Mc/sec: 514.34
//
Query:       MMETSP1325-20131115|361_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-29  100.6   0.0    3.7e-29  100.3   0.0    1.1  1  PF00166.16 Chaperonin 10 Kd subunit


Domain annotation for each model (and alignments):
>> PF00166.16  Chaperonin 10 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.3   0.0   2.7e-33   3.7e-29       2      92 ..      53     143 ..      52     144 .. 0.98

  Alignments for each domain:
  == domain 1    score: 100.3 bits;  conditional E-value: 2.7e-33
  PF00166.16   2 ikplgdrVlveraeeeektkggiilpdsakekplqGeVvaVGeGarnekgekvpeevkvGdkVllpkysGtkvkvegkeyvvlkekdIlav 92 
                 i+pl drVlv+r+ ++ +t+ggi+lpd+a +k ++GeV++VG+Garn++g+ +p++v vGdkVllp+y+G++vk+ ++e+ +++e++Il++
   MMETSP1325-20131115|361_1  53 IIPLADRVLVKRVVAQAQTAGGIFLPDAATQKVNEGEVISVGPGARNTAGDLIPMSVAVGDKVLLPEYGGNTVKMGDEEFNLFREAEILGK 143
                 89***********99**************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 609.60
//
Query:       MMETSP1325-20131115|365_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-08   31.9   0.0    5.2e-08   31.7   0.0    1.1  1  PF00852.14 Glycosyltransferase family 10 (fucosyltransferase)


Domain annotation for each model (and alignments):
>> PF00852.14  Glycosyltransferase family 10 (fucosyltransferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.0   3.8e-12   5.2e-08     212     307 ..      57     159 ..       9     162 .. 0.80

  Alignments for each domain:
  == domain 1    score: 31.7 bits;  conditional E-value: 3.8e-12
  PF00852.14 212 c...........leskaleeeellktlaqykFyLafENslckDYiTEKlwknalaagaVPVvlGpsranyerfvPsdsfIhvddFsspkeLaeyLkkLdkndeeYrk 307
                 c             + + +++  ++  + ++F+L +EN + +    EKl+ na  ag+V ++ G   +   ++v + s+I+ d  + +++L + +++L++++e+Y++
   MMETSP1325-20131115|365_1  57 ChgshpetsewdAIQSQHSTGAEVENKKAFRFILTMENHMTNGRLSEKLF-NAHLAGTVAIYRG--HPAHSAIVNPASYIQYDINNATSALNR-ILELERDHEKYLQ 159
                 45555555555422334444557888999*********************.*************..9999************99999999876.668********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.69
# Mc/sec: 729.33
//
Query:       MMETSP1325-20131115|366_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-05   24.9   5.6    1.3e-05   24.7   3.9    1.1  1  PF03798.11 TLC domain
  ------ inclusion threshold ------
       0.39    8.9   3.3       0.48    8.6   2.3    1.0  1  PF09531.5  Nucleoporin protein Ndc1-Nup


Domain annotation for each model (and alignments):
>> PF03798.11  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   3.9   1.9e-09   1.3e-05     107     196 ..       3      93 ..       1      95 [. 0.81

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 1.9e-09
  PF03798.11 107 elstpflslrkilkylrgksklskdllfngvlfllsFfvcRlvlfpylillsyldvasisveaap...lvlpviclilllvL.qllnlyWfyli 196
                 el+ +f+ +r ++ ++ g   +s+++++ngv++lls+ ++R+  + + + l  +++a  s++ +p   + ++ ++++l++vL  +l+l+W y+i
   MMETSP1325-20131115|366_1   3 ELTGVFIGARFVMIKV-GL-GSSVLFMVNGVIMLLSWWYLRIWGYVVRLALILYKEA-DSIYLNPvdgTLIRNGLVTLCWVLgSALQLMWGYKI 93 
                 89999***********.77.67899*****************988765555555444.577777767778888888888888899*******99 PP

>> PF09531.5  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.3   7.1e-05      0.48     185     259 ..      14      89 ..       6     100 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 7.1e-05
  PF09531.5 185 slvkkslilslisvlvypivY..ffglrkpiwklsnllaklfldldksallpsfl.gllnlslllrllllsflllltw 259
                 ++k +l +s++++++ +i+   +  lr  iw ++  la + +++  s +l+++  +l+   l++ ++ l++ l l w
  MMETSP1325-20131115|366_1  14 VMIKVGLGSSVLFMVNGVIMLlsWWYLR--IWGYVVRLALILYKEADSIYLNPVDgTLIRNGLVTLCWVLGSALQLMW 89 
                589999***************9866666..****999*****************999*******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.63
# Mc/sec: 578.17
//
Query:       MMETSP1325-20131115|367_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-21   74.4   0.1      5e-20   71.4   0.1    2.0  2  PF00072.19 Response regulator receiver domain
  ------ inclusion threshold ------
       0.16   11.2   0.6       0.29   10.4   0.4    1.5  1  PF10555.4  Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1


Domain annotation for each model (and alignments):
>> PF00072.19  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.066   4.5e+02      50      78 ..      44      74 ..      24     100 .. 0.75
   2 !   71.4   0.1   7.3e-24     5e-20       1     107 [.     108     214 ..     108     217 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.066
                ESS-TT..----HHHHHHHHHTTTSEEEEEE CS
  PF00072.19 50 Diempg..mdGlellkeireeepklpiivvt 78
                D+e p+  ++G ++++ +++++ + +  +++
   MMETSP1325-20131115|367_1 44 DHEAPQptVTGTNTAQAMHNNALNSKLALIS 74
                5555544499999999999999888888887 PP

  == domain 2    score: 71.4 bits;  conditional E-value: 7.3e-24
                 EEEESSSHHHHHHHHHHHHHTTSEEEEEESSSHHHHHHHHHHH.ESEEEEESS-TT----HHHHHHHHHTTTSEEEEEES-TTHHHHHHHHHTT-SEEEESS--HHHH CS
  PF00072.19   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
                 vl+v+D+ + r+ + ++l+k ++ + +   dg ea+  +k  + + lil+D emp+m G+e+++ i + ++++pi+ +tah +++++ + l+aGa ++l+Kp +p+++
   MMETSP1325-20131115|367_1 108 VLVVEDSASSRKMIVKLLTKLNI-SSEQSVDGAEAVGRIKSGErFKLILMDREMPTMGGVEATSLIMQLNKDVPIVGLTAHTDDATRADFLNAGAVGMLTKPLKPKDV 214
                 89*********************.66666666666666655555***********************************************************99986 PP

>> PF10555.4  Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.4   4.3e-05      0.29       3      10 ..     159     166 ..     158     166 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 4.3e-05
  PF10555.4   3 gTPTMGGv 10 
                ++PTMGGv
  MMETSP1325-20131115|367_1 159 EMPTMGGV 166
                78*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.66
# Mc/sec: 904.08
//
Query:       MMETSP1325-20131115|370_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-14   52.8  12.3    5.5e-14   52.1   8.6    1.3  1  PF06951.6 Group XII secretory phospholipase A2 precursor (PLA2G12)
     0.0013   18.8   6.4     0.0013   18.8   4.4    1.9  2  PF09056.6 Prokaryotic phospholipase A2
  ------ inclusion threshold ------
      0.021   14.8   0.1        2.1    8.4   0.0    2.2  2  PF10551.4 MULE transposase domain


Domain annotation for each model (and alignments):
>> PF06951.6  Group XII secretory phospholipase A2 precursor (PLA2G12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   8.6   1.2e-17   5.5e-14      79     182 ..       6     100 ..       2     104 .. 0.84

  Alignments for each domain:
  == domain 1    score: 52.1 bits;  conditional E-value: 1.2e-17
  PF06951.6  79 pepnGcgsyllGlkldlgiP..amtkccnqhdicydtcgsekedcdekfklclekicsdlkkslglsskvkacesavdllfdtvltlGckpyldsqraacicqeee 182
                p +nGc+ + +     + +P  +++kcc++hd cy +cg +k++c++ f  cl++ c+   k        + c  ++++   +v  +Gc  y +sq   c c  ++
  MMETSP1325-20131115|370_1   6 PWSNGCSVPPF-----IQLPdfSFEKCCDNHDACYMSCGVSKDECEKSFSACLKRHCKSAYKG------NEECINTANTYVMGVTAFGCNGYQESQVIGCECVSPN 100
                56788888665.....34442269*********************************987653......5779999999999********************8765 PP

>> PF09056.6  Prokaryotic phospholipase A2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   4.4   2.8e-07    0.0013      30     111 .]       8      82 ..       3      82 .. 0.84
   2 ?   -1.7   0.0      0.66     3e+03      67      76 ..     116     125 ..     100     153 .. 0.55

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 2.8e-07
  PF09056.6  30 sDgCskapdnpv.gfeFkpsCarHdfgYrNykaqerfteankkkiddnfkkdlkkqcaekkavkeeacealadvyyqavrafg 111
                s gCs +p  ++ +f F++ C+ Hd  Y    +        k++ ++ f + lk++c++  +  +e c ++a++y  +v afg
  MMETSP1325-20131115|370_1   8 SNGCSVPPFIQLpDFSFEKCCDNHDACYMSCGVS-------KDECEKSFSACLKRHCKSAYKG-NEECINTANTYVMGVTAFG 82 
                689**9995444399*************877654.......56899***********766555.899************9997 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.66
  PF09056.6  67 eankkkiddn 76 
                + nk+k+ + 
  MMETSP1325-20131115|370_1 116 KYNKTKTAED 125
                3333333322 PP

>> PF10551.4  MULE transposase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00046       2.1      21      53 ..      29      61 ..      18      72 .. 0.73
   2 ?    4.9   0.0    0.0056        25      14      51 ..      75     115 ..      61     132 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00046
  PF10551.4 21 deedegvplafalvedesaeswtwfle.tlkkal 53
               d+ ++  ++ +++ +de+++s++ +l+ + k a+
  MMETSP1325-20131115|370_1 29 DN-HDACYMSCGVSKDECEKSFSACLKrHCKSAY 61
               44.356679******************5444444 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0056
  PF10551.4  14 ak..vlvgvdeedegvplafalvedesaeswt.wfletlkk 51 
                 +  +++g+++ +e+++++++ v+  +a+  t +++ ++ +
  MMETSP1325-20131115|370_1  75 VMgvTAFGCNGYQESQVIGCECVSPNNAKAHTeKVITNFFN 115
                2256799****************997666644333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       918  (0.0671445); expected 273.4 (0.02)
Passed bias filter:                      520  (0.0380339); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|369_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   12.2   2.2       0.13   11.5   1.5    1.3  1  PF04886.7 PT repeat


Domain annotation for each model (and alignments):
>> PF04886.7  PT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.5   9.3e-06      0.13      11      26 ..       1      16 [.       1      19 [. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 9.3e-06
  PF04886.7 11 TvqPTgqPtaqPTdqP 26
               T  PT +P+a+PT+ P
  MMETSP1325-20131115|369_1  1 TAFPTPAPSAEPTSWP 16
               5569999999999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.62
# Mc/sec: 695.72
//
Query:       MMETSP1325-20131115|363_1  [L=605]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0062   15.5   0.6       0.01   14.8   0.4    1.2  1  PF01540.11 Adhesin lipoprotein
  ------ inclusion threshold ------
        0.3   11.0   3.6       0.19   11.7   0.7    2.0  2  PF00934.15 PE family
        4.2    6.7  14.8        2.6    7.3   4.0    3.1  3  PF10226.4  Uncharacterized conserved proteins (DUF2216)
        4.6    6.7   9.4        1.2    8.7   2.9    2.2  2  PF03962.10 Mnd1 family
        8.8    4.1  13.7        1.2    7.0   0.1    2.2  2  PF07218.6  Rhoptry-associated protein 1 (RAP-1)


Domain annotation for each model (and alignments):
>> PF01540.11  Adhesin lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.4   3.8e-06      0.01      85     155 ..     261     366 ..     255     370 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.8e-06
  PF01540.11  85 ygdypaiisklsaavenaksekkavddknakia....................................kelaernakiqsnieelkklskeafelsktvektiaev 155
                  +d  aii +l   ve  k+e+   + +na+ a                                    ++l e+ +k+  +++elk l +e+ el   ++++  ++
   MMETSP1325-20131115|363_1 261 LSDPYAIIRRLVKMVEVLKQERDDAN-NNARAAgvaddgrasrdltllqreltemrienanmfvlqeenRQLKEQAEKVTVDMDELKLLREENKELQSQLNEATQQL 366
                 57888***************998764.466666899**************************************************************999987665 PP

>> PF00934.15  PE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.5   1.2e+04      67      85 ..     115     133 ..     110     135 .. 0.74
   2 ?   11.7   0.7   6.8e-05      0.19      29      85 ..     396     453 ..     386     457 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 4.5
  PF00934.15  67 aqaaafheqfvqaltaaaa 85 
                 + aa   ++fv+ l+ +a+
   MMETSP1325-20131115|363_1 115 TAAARSGDNFVHRLRRSAE 133
                 5566678889999988885 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 6.8e-05
  PF00934.15  29 naaaaapt.tavlaaaaDeVSaaiAalFsahaqeyqalsaqaaafheqfvqaltaaaa 85 
                  a a ++t ++vl  a+De  a +AalF+   ++ ++l + ++a+ e++  a++a ++
   MMETSP1325-20131115|363_1 396 PALARPQTaAEVLDEAEDEMDAEVAALFARNEHALKQLREDVKAVEEEMDGAVAAESG 453
                 45555555157***********************************999888877665 PP

>> PF10226.4  Uncharacterized conserved proteins (DUF2216)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3     0.039   1.1e+02      37      77 ..     294     333 ..     276     335 .. 0.74
   2 ?    7.3   4.0   0.00095       2.6      21      58 ..     326     362 ..     306     370 .. 0.76
   3 ?    3.1   1.0     0.019        52     134     190 ..     432     489 ..     402     496 .. 0.65

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.039
  PF10226.4  37 llehgnlirevnrrLqlhLneireLkdvnqkLqednqeLrd 77 
                + + g+  r+    Lq  L+e+r        Lqe+n++L++
  MMETSP1325-20131115|363_1 294 VADDGRASRDLT-LLQRELTEMRIENANMFVLQEENRQLKE 333
                556666666664.5999999999766666789******997 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.00095
  PF10226.4  21 eLvrrLrraeaeklsvllehgnlirevnrrLqlhLnei 58 
                e  r+L +++aek++v ++  +l+re n++Lq  Lne 
  MMETSP1325-20131115|363_1 326 EENRQL-KEQAEKVTVDMDELKLLREENKELQSQLNEA 362
                444555.689**************************96 PP

  == domain 3    score: 3.1 bits;  conditional E-value: 0.019
  PF10226.4 134 eLkelvllldeekggsgkgkagsrssidsqaslsslegsaa.vvrdvGdgsstsstgs 190
                +L+e v +++ee  g+ + ++g++ s+   + +s+ + +aa  +r     ss+ss+ s
  MMETSP1325-20131115|363_1 432 QLREDVKAVEEEMDGAVAAESGAGVSSRRPSASSTKNDMAApPPRRKKSSSSSSSSKS 489
                5889999******888888888887777666665555555534444444444344333 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.9   0.00042       1.2      79     161 ..     312     369 ..     265     380 .. 0.61
   2 ?    0.2   0.1      0.16   4.4e+02     109     126 ..     427     444 ..     397     509 .. 0.66

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00042
  PF03962.10  79 eelkqrikelqaeiekekkkreeteereelleelkeleeelkklkkeleklakldpekveklkeetevakesanrwtDnifll 161
                 +e                         +    ++  l+ee+++lk++ ek  + d ++++ l+ee++++++++n  t ++  l
   MMETSP1325-20131115|363_1 312 TE------------------------MRIENANMFVLQEENRQLKEQAEK-VTVDMDELKLLREENKELQSQLNEATQQLQAL 369
                 22........................222334455567777777777764.35677777777777777777777777666554 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.16
  PF03962.10 109 leelkeleeelkklkkel 126
                  + lk+l+e +k++++e+
   MMETSP1325-20131115|363_1 427 EHALKQLREDVKAVEEEM 444
                 222333333333333332 PP

>> PF07218.6  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1   0.00042       1.2     114     286 ..     203     359 ..     185     377 .. 0.49
   2 ?   -1.0   6.6      0.11   3.1e+02     128     175 ..     455     502 ..     424     533 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00042
  PF07218.6 114 ddskddlefkasqsvvktskpkststeslksssdskskasaksnvksaskyGesssseesatdsskasasvagivGadeeeppapkntltpleelyetnvnlfalkyslekle...keidilkneydkvkekeekeldeemkkikedkkkelekilkesdeekfkfdeekflkndv 286
                +d+ +d +   s+ +   s  ++  +++ + ss ++s+ s + +  ++   G++s ++ s   +  +       v  +e +    +   + + +   ++ +l  l+  l ++     ++ +l++e  ++ke+ e                   k++ + de k   +e+k l+ ++
  MMETSP1325-20131115|363_1 203 EDADGDADTLGSHGKLSGSVAEALAGDGANGSSSGSSSLSRPGSGTAGRITGGASGADLSDPYAIIRRLVKMVEVLKQERDDANNNARAAGVADDGRASRDLTLLQRELTEMRienANMFVLQEENRQLKEQAE-------------------KVTVDMDELKLLREENKELQSQL 359
                45556666666666666666666666666666666666666666666666666666666654443333322222223333322222223334444444455555555555443111344445555444444333...................33333333333333333333333 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.11
  PF07218.6 128 vvktskpkststeslksssdskskasaksnvksaskyGesssseesat 175
                 v + +p+++st++  ++ + + k s+ s++ s sk G+s+ s e   
  MMETSP1325-20131115|363_1 455 GVSSRRPSASSTKNDMAAPPPRRKKSSSSSSSSKSKTGKSTRSSEPLK 502
                45677899999999999999999999999999*******999887543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1402  (0.102545); expected 273.4 (0.02)
Passed bias filter:                      456  (0.0333528); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.29u 0.38s 00:00:01.67 Elapsed: 00:00:00.73
# Mc/sec: 1986.02
//
Query:       MMETSP1325-20131115|371_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1639.11
//
Query:       MMETSP1325-20131115|368_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-06   25.1   3.9    8.3e-06   25.1   2.7    1.9  2  PF05151.7  Photosystem II reaction centre M protein (PsbM)
  ------ inclusion threshold ------
      0.089   12.2   2.2       0.13   11.7   1.5    1.2  1  PF02453.12 Reticulon


Domain annotation for each model (and alignments):
>> PF05151.7  Photosystem II reaction centre M protein (PsbM)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.4      0.54   3.7e+03       6      12 ..      27      33 ..      25      33 .. 0.81
   2 !   25.1   2.7   1.2e-09   8.3e-06       2      29 ..      95     122 ..      94     124 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 0.54
               ---HHHH CS
  PF05151.7  6 LgFiAtl 12
               ++++A++
  MMETSP1325-20131115|368_1 27 FALVASA 33
               8999997 PP

  == domain 2    score: 25.1 bits;  conditional E-value: 1.2e-09
                -------HHHHHHHHHHHHHHHHHHHHH CS
  PF05151.7   2 EVNiLgFiAtlLFilvPtvFLliLYvqT 29 
                EV+ ++++A++L+++ P  FL+iLY  +
  MMETSP1325-20131115|368_1  95 EVTFAAYLAVILGTFLPCLFLVILYLNS 122
                99***********************776 PP

>> PF02453.12  Reticulon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.5   1.9e-05      0.13      29     138 ..      18     119 ..       8     122 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.9e-05
  PF02453.12  29 llelsllsvvskllllllavtfllelakkllnaskkgpfkepldpevtlseetveeiaeslvelinkalkelrrlllaedlkdslkaavllyllsylgslfslltLlyig 138
                  + +sl+++++ ++ ++ +v + +++ + +  +         +      +   v++++ ++ +    + +   +++    + +sl + +++yl+ +lg +++ l L+++ 
   MMETSP1325-20131115|368_1  18 TMRFSLFTFFALVASATAFVPAKPATKTWVSARAA-------PVM-SAQPPVDVKKMVPAFLAAAPAFAADSTDIISQMPMATSLEVTFAAYLAVILGTFLPCLFLVILY 119
                 34455555555444444444444444444444433.......333.4666788999**************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 596.91
//
Query:       MMETSP1325-20131115|376_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-15   56.6   0.0    2.5e-15   56.5   0.0    1.0  1  PF01168.15 Alanine racemase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF01168.15  Alanine racemase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.5   0.0   1.8e-19   2.5e-15     133     216 ..       4      84 ..       1      85 [. 0.76

  Alignments for each domain:
  == domain 1    score: 56.5 bits;  conditional E-value: 1.8e-19
                 HHHHHHHS.T.EEEEEEBE--SSTTSCSHHHHHHHHHHHHHHHCHCSH..EE-S...--EEE-HHHHHH-GGSTTTSEEEE--TTT--H CS
  PF01168.15 133 laealaal.pglrlrGlmthfaladepdateraqfarfreladeleaag.lrpl...vlslgnSadlllaiahegstmvRpGialyGar 216
                 la a+ ++ p+l+++Glmt+ a  d  +    ++f+++ e+++ + +a   + +   vls+g+S+d++ ai + gs+ vR+G+ ++Gar
   MMETSP1325-20131115|376_1   4 LAMAVVREcPRLEVQGLMTIGAPGD--P----SCFDKLVECRKVVAEALgRD-PsslVLSMGMSGDFETAI-ERGSSSVRVGSTIFGAR 84 
                 444444444***************9..4....37777777777773333222.2355**************.77*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.64
# Mc/sec: 336.99
//
Query:       MMETSP1325-20131115|374_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.5    6.9   8.5        2.9    6.7   5.9    1.1  1  PF00242.12 DNA polymerase (viral) N-terminal domain
        4.9    6.6   8.5       0.37   10.2   1.8    1.9  2  PF01862.11 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
        5.4    5.8   7.9        8.6    5.1   5.5    1.4  1  PF08602.5  Mgr1-like, i-AAA protease complex subunit
        5.5    7.3  10.6        6.9    7.0   0.9    3.2  3  PF05016.9  Plasmid stabilisation system protein
        8.9    5.9  12.9         12    5.5   8.9    1.2  1  PF07897.6  Protein of unknown function (DUF1675)


Domain annotation for each model (and alignments):
>> PF00242.12  DNA polymerase (viral) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.9     0.001       2.9     227     348 ..      59     179 ..       7     189 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.001
  PF00242.12 227 vsrksdkersvglvvqskiqrsRlglqakqgklakeqqgrslalrarkessarrsvgvedsssrvksnrasksssslsqsavretaysslstserasssesavesrsvpgksvsskekgall 348
                    +s+ e++++l v++kiq+ +++   +   l++++  r + + +   s++      + + +  +++++ k +++l+++++ ++ + s+s s +++s + + e +++ +++++ ++++ ++
   MMETSP1325-20131115|374_1  59 RRTTSNLESKIDLLVEKKIQE-KVEAAMQAKALKRAATRRPTGVLNAIASTNDSTSYEKATRAAIQRHQTLKLEKKLTSLSEMQNVRRSQSKSSEYQSPQAKAEFEKIMKEKEQEQKQRDVV 179
                 223445566777888888865.5666666566666666677777777777777777777788899999999999999999999999999999988999999999999999999999888775 PP

>> PF01862.11  Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.4      0.26   7.2e+02     110     110 ..      51      51 ..       2      95 .. 0.54
   2 ?   10.2   1.8   0.00014      0.37      63     147 ..     100     185 ..      85     194 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.26
                 H CS
  PF01862.11 110 e 110
                 e
   MMETSP1325-20131115|374_1  51 E 51 
                 2 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00014
                 -EEEEE---B-------EEEEEEEEEEES..TT----EEEE-----HHH.HHHHHHHHHH------....---EEEEEEEEEEEE- CS
  PF01862.11  63 eivftvmarassnepgrliaaavGvaipkd.kkkfGyisEyhafgekeeeaeeiaeklakemletrlkklsekiketklitkeaev 147
                  +++++ ++++s++ +++  aa+      + +kk   +sE +++ +++ +  e+ +  ak+ +e+ +k+++++ k+  ++++ ++ 
   MMETSP1325-20131115|374_1 100 GVLNAIASTNDSTSYEKATRAAIQRHQTLKlEKKLTSLSEMQNVRRSQSKSSEYQSPQAKAEFEKIMKEKEQEQKQRDVVAAAIKA 185
                 58999******************99876545************************************9777777777777666654 PP

>> PF08602.5  Mgr1-like, i-AAA protease complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.5    0.0031       8.6     245     344 ..      88     188 ..      10     190 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0031
  PF08602.5 245 vqnkrraketslgllnkikaktkkleiyleeneenrkrikkl.leeelkevnelnkaerldlilkgksq.lyneealrsvileedhevdeDidleeiwllye 344
                   kr+a ++ +g+ln i + + + + y ++ +   +r+++l le++l  ++e+++ +r + +  + ++ + ++e+ + +  +e+ + + D     i++ ++
  MMETSP1325-20131115|374_1  88 KALKRAATRRPTGVLNAIASTNDSTS-YEKATRAAIQRHQTLkLEKKLTSLSEMQNVRRSQSKSSEYQSpQAKAEFEKIMKEKEQEQKQRDVVAAAIKATFD 188
                2335666778899*****99888877.999999999999874499999999999999988888877777577777777666666667777877777777776 PP

>> PF05016.9  Plasmid stabilisation system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.9    0.0025       6.9       6      43 ..      45      76 ..      44     102 .. 0.85
   2 ?   -0.1   0.0       0.4   1.1e+03      25      48 ..     123     146 ..     104     151 .. 0.76
   3 ?    4.3   0.6     0.017        46       4      37 ..     155     188 ..     153     190 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0025
               HHHHHHHHHHC........-.---CHH...HHHHHHHC CS
  PF05016.9  6 rAlkdlkkiadyiardgpaakrfldaleealellaenp 43
               +A++d ++++ +i      a+r ++ le++++ll e  
  MMETSP1325-20131115|374_1 45 AAKADAEEARANI------ARRTTSNLESKIDLLVEKK 76
               79***********......9999999999999998765 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.4
                -.---CHH...HHHHHHHCTTT-- CS
  PF05016.9  25 akrfldaleealellaenpalgrp 48 
                ++  + +le++l +l e++   r+
  MMETSP1325-20131115|374_1 123 QRHQTLKLEKKLTSLSEMQNVRRS 146
                556677899999999998877665 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.017
                -HHHHHHHHHHHC.........-.---CHH...HH CS
  PF05016.9   4 tprAlkdlkkiadyiardgp.aakrfldaleeale 37 
                +p+A+++++ki +   ++++ +++ + +a++++++
  MMETSP1325-20131115|374_1 155 SPQAKAEFEKIMKEK-EQEQkQRDVVAAAIKATFD 188
                89**********954.4445578888888888875 PP

>> PF07897.6  Protein of unknown function (DUF1675)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.9    0.0042        12      43     164 ..      47     172 ..      16     197 .. 0.45

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0042
  PF07897.6  43 elegtdvativ..sdgagLeRTtslpaetEeekrkrkelqslrrleakrkrlekessgvsngddqdsveaakaaasqrdkesskavetgs..eeatsssssgpsssglkekdvlveaaasgrakde 164
                ++++++ + ++   ++ +Le    l +e+  + + ++ +q +    a  +r     + ++ ++d +s e a+ aa qr+++ + +++ +s  e+++   s+++ss+ ++ + + + ++ +++ ++e
  MMETSP1325-20131115|374_1  47 KADAEEARANIarRTTSNLESKIDLLVEKKIQEKVEAAMQAKALKRAATRRPTGVLNAIASTNDSTSYEKATRAAIQRHQTLKLEKKLTSlsEMQNVRRSQSKSSEYQSPQAKAEFEKIMKEKEQE 172
                233322222222223334555555555555555555555555555555455444455555566666666666666666665443333333003333333333333322222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2414  (0.176565); expected 273.4 (0.02)
Passed bias filter:                      661  (0.048347); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.80u 0.40s 00:00:01.20 Elapsed: 00:00:00.74
# Mc/sec: 641.19
//
Query:       MMETSP1325-20131115|375_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   14.9   5.7         14    6.0   0.2    4.5  5  PF00560.28 Leucine Rich Repeat
      0.018   14.6   1.1       0.72    9.5   0.1    2.5  2  PF13855.1  Leucine rich repeat
        1.2    9.3   7.2          8    6.7   0.1    4.0  5  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.1   5.2e+03       6      12 ..       2       9 ..       2      12 .. 0.75
   2 ?    1.4   0.0       0.1   4.6e+02       2      20 ..      20      39 ..      19      41 .. 0.77
   3 ?    4.0   0.0     0.014        64       3      14 ..      44      57 ..      42      67 .. 0.74
   4 ?    6.0   0.2    0.0031        14       2      20 ..      65      84 ..      64      86 .. 0.82
   5 ?    3.2   0.0     0.027   1.2e+02       2      13 ..      88     100 ..      87     108 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.1
                EETSS.BC CS
  PF00560.28  6 dLsgN.nl 12
                +L+++ ++
   MMETSP1325-20131115|375_1  2 NLNNCgKF 9 
                78999665 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.1
                ESEEEETSS.BCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppsls 20
                +++++Ls+   l+ +++  ++
   MMETSP1325-20131115|375_1 20 ITKINLSYMdTLEgDIQV-FK 39
                688999998888888877.66 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.014
                SEEEETSS.BCB.C CS
  PF00560.28  3 eeLdLsgN.nlt.s 14
                +  +Lsg+ +l  +
   MMETSP1325-20131115|375_1 44 TNMNLSGCwKLAgN 57
                6789****998766 PP

  == domain 4    score: 6.0 bits;  conditional E-value: 0.0031
                ESEEEETSS.BCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppsls 20
                ++ L+L g+ +l+ ++ + l+
   MMETSP1325-20131115|375_1 65 ITDLNLCGCnKLEgDIES-LK 84
                678******9**999987.65 PP

  == domain 5    score: 3.2 bits;  conditional E-value: 0.027
                 ESEEEETSS.BCB CS
  PF00560.28   2 LeeLdLsgN.nlt 13 
                 L++L L g+ +lt
   MMETSP1325-20131115|375_1  88 LTSLILYGCnKLT 100
                 899*****98887 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0076        35      26      59 ..      19      51 ..       2      54 .. 0.82
   2 ?    9.5   0.1   0.00016      0.72       2      41 ..      64     103 ..      63     114 .] 0.78

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0076
  PF13855.1 26 nLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
               + ++++Ls+  + + + ++fk++ +++  nLsg+
  MMETSP1325-20131115|375_1 19 SITKINLSYMDTLEGDIQVFKDM-AITNMNLSGC 51
               67889999777777788899999.9999999986 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00016
  PF13855.1   2 nLkeLdLs.nNrlk.vipdgaFkglsnLkvLdLs.gnnlksis 41 
                ++++L+L+ +N+l+ +i+  ++k+++ L++L L  +n+l+ + 
  MMETSP1325-20131115|375_1  64 SITDLNLCgCNKLEgDIE--SLKDMP-LTSLILYgCNKLTGMY 103
                6789****4468886776..9****9.9999999899998765 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.2      0.27   1.2e+03       3       3 ..      19      19 ..       2      27 .. 0.52
   2 ?    0.4   0.0      0.19   8.6e+02       3      12 ..      19      28 ..      17      37 .. 0.80
   3 ?   -1.3   0.0       0.7   3.2e+03       5      12 ..      44      51 ..      42      59 .. 0.76
   4 ?    6.7   0.1    0.0018         8       2      15 ..      63      77 ..      62      85 .. 0.73
   5 ?    2.8   0.0     0.032   1.4e+02       4      14 ..      88      99 ..      87     103 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.27
  PF13516.1  3 n 3 
               +
  MMETSP1325-20131115|375_1 19 S 19
               3 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.19
  PF13516.1  3 nLtsLdLsnN 12
               ++t ++Ls+ 
  MMETSP1325-20131115|375_1 19 SITKINLSYM 28
               6899999985 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.7
  PF13516.1  5 tsLdLsnN 12
               t+ +Ls++
  MMETSP1325-20131115|375_1 44 TNMNLSGC 51
               55589988 PP

  == domain 4    score: 6.7 bits;  conditional E-value: 0.0018
  PF13516.1  2 knLtsLdLsnNq.ig 15
               +++t+L+L +++ + 
  MMETSP1325-20131115|375_1 63 QSITDLNLCGCNkLE 77
               689*****9977253 PP

  == domain 5    score: 2.8 bits;  conditional E-value: 0.032
  PF13516.1  4 LtsLdLsnNq.i 14
               LtsL L +++ +
  MMETSP1325-20131115|375_1 88 LTSLILYGCNkL 99
               99****987625 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.65
# Mc/sec: 420.28
//
Query:       MMETSP1325-20131115|377_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   14.7   2.2      0.023   14.6   1.5    1.1  1  PF04874.9  Mak16 protein C-terminal region
      0.089   12.1   5.4      0.096   12.0   3.7    1.1  1  PF03066.10 Nucleoplasmin
       0.36   10.9   6.7       0.43   10.7   4.6    1.2  1  PF09026.5  Centromere protein B dimerisation domain
        1.2    7.4   3.9        1.2    7.3   2.7    1.0  1  PF03344.10 Daxx Family


Domain annotation for each model (and alignments):
>> PF04874.9  Mak16 protein C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   1.5   6.7e-06     0.023      52      84 ..      29      58 ..      13      67 .. 0.58

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 6.7e-06
  PF04874.9 52 kkaleaeeseendeeeeeeedeeeeedegevey 84
               +++ ++   +e+de eeeeed   +++ege e 
  MMETSP1325-20131115|377_1 29 ERTGARDGNDEDDEGEEEEED---DQEEGEEET 58
               444444444555555555554...444444444 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.7   2.8e-05     0.096     120     142 ..      35      57 ..      10      61 .. 0.52

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.8e-05
                 --XXXXXXXXXXXXXXXXXXXXX CS
  PF03066.10 120 deedeeeeddeedddeeeeeeee 142
                 d +de++e +ee++d++ee eee
   MMETSP1325-20131115|377_1  35 DGNDEDDEGEEEEEDDQEEGEEE 57 
                 22222222222222222222222 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.6   0.00013      0.43      15      37 ..      35      57 ..      23      67 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00013
  PF09026.5 15 dseeeeedeeedeededeedeee 37
               d ++e+++ ee+eed++ee eee
  MMETSP1325-20131115|377_1 35 DGNDEDDEGEEEEEDDQEEGEEE 57
               44444444444444444444444 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   2.7   0.00036       1.2     449     475 ..      36      56 ..      13      63 .. 0.47

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00036
  PF03344.10 449 edeeddekeeedkseeeeeeeeeeeee 475
                  ++edde e      eeee+++ee ee
   MMETSP1325-20131115|377_1  36 GNDEDDEGE------EEEEDDQEEGEE 56 
                 222222222......111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.44s 00:00:00.85 Elapsed: 00:00:00.70
# Mc/sec: 260.18
//
Query:       MMETSP1325-20131115|380_1  [L=271]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.41   10.7   2.0       0.78    9.8   1.4    1.5  1  PF12267.3 Protein of unknown function (DUF3614)


Domain annotation for each model (and alignments):
>> PF12267.3  Protein of unknown function (DUF3614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.4   5.7e-05      0.78      29      98 ..      99     165 ..      79     181 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 5.7e-05
  PF12267.3  29 vaksrvsfvevfvkrrrsrsaksklrfplvsvvveesvpalkspsrvvvkkvpvssekssssrgassPrv 98 
                v+++ v+ v+v    r++r   ++++ +    + +e+  a k++ r+   k p+ s+++s  + a+sP +
  MMETSP1325-20131115|380_1  99 VEEAPVPLVDVEEEARKQR---VSASLEIYRAQRKEQEEARKAKGRGRKGKEPTTSDEPSAAKAAMSPAC 165
                6677788888855555555...5588888888888999999***************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       487  (0.0356202); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.79
# Mc/sec: 822.04
//
Query:       MMETSP1325-20131115|379_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       703  (0.051419); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.65
# Mc/sec: 608.31
//
Query:       MMETSP1325-20131115|385_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-11   41.1   0.0    1.5e-10   40.4   0.0    1.3  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    6.9e-06   25.7   0.0     0.0021   17.7   0.0    2.2  2  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    0.00068   19.4   0.0      0.001   18.9   0.0    1.2  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.027   14.6   0.8      0.033   14.3   0.6    1.1  1  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   4.4e-14   1.5e-10       1      64 [.      79     138 ..      79     142 .. 0.95

  Alignments for each domain:
  == domain 1    score: 40.4 bits;  conditional E-value: 4.4e-14
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBE CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkkl 64 
                 +f  nLp d++e  L  lF+ + +++++++v+      kg af+eF +e  a  Al+ l+g kl
   MMETSP1325-20131115|385_1  79 IFAQNLPADCNEMMLSVLFKTYQGFQEVRMVPG----GKGLAFIEFSDEVTAGTALAGLQGFKL 138
                 6778****************************7....************************987 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0024       8.1      39      56 .]       3      20 ..       1      20 [. 0.90
   2 !   17.7   0.0   6.1e-07    0.0021      11      46 ..     103     138 ..      93     149 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0024
  PF13893.1 39 eylngvklygktLkveys 56
               ++++g ++y+k++++ +s
  MMETSP1325-20131115|385_1  3 AKMQGFPFYDKPMRIAFS 20
               6799***********998 PP

  == domain 2    score: 17.7 bits;  conditional E-value: 6.1e-07
  PF13893.1  11 verikifrkkggqAfvefdtveaArkakeylngvkl 46 
                 +++++ + ++g Af+ef+++  A +a++ l+g kl
  MMETSP1325-20131115|385_1 103 FQEVRMVPGGKGLAFIEFSDEVTAGTALAGLQGFKL 138
                5899*************************9999876 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   2.9e-07     0.001       1      57 [.      79     131 ..      79     138 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 2.9e-07
  PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkdgrgrgfAfvefeseedAqkalk 57 
                ++  +lp + +e  l  +f+ y   ++vr+++     g+g Af+ef++e  A  al+
  MMETSP1325-20131115|385_1  79 IFAQNLPADCNEMMLSVLFKTYQGFQEVRMVPG----GKGLAFIEFSDEVTAGTALA 131
                67789***************************9....7***********99999986 PP

>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.6   9.5e-06     0.033      63      99 ..      36      71 ..      16     103 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 9.5e-06
  PF10152.4 63 paaarrsggpppppgaraeaaaqeaeaaraetpaeqe 99
               + ++r++++ppppp+ +ae+++ ++e+a++++pa++ 
  MMETSP1325-20131115|385_1 36 QREKRKREEPPPPPA-AAEPTPMAMEEAPPAPPAAEV 71
               445555665666665.899999999999999888754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.59
# Mc/sec: 613.30
//
Query:       MMETSP1325-20131115|384_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   13.8   4.4      0.058   13.6   3.0    1.1  1  PF09278.6 MerR, DNA binding


Domain annotation for each model (and alignments):
>> PF09278.6  MerR, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   3.0   4.3e-06     0.058      32      63 ..       9      40 ..       3      42 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 4.3e-06
               -BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF09278.6 32 rpcadvrallaeklaeleeqiaeLqalraeLe 63
                ++a++ a+++++ aele+ + eL+al++ L+
  MMETSP1325-20131115|384_1  9 LAKAEAAAMAKAHEAELEALRVELAALQQALT 40
               5789999**********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       664  (0.0485664); expected 273.4 (0.02)
Passed bias filter:                      558  (0.0408133); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.43s 00:00:00.78 Elapsed: 00:00:00.66
# Mc/sec: 199.70
//
Query:       MMETSP1325-20131115|381_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.56
# Mc/sec: 996.38
//
Query:       MMETSP1325-20131115|386_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-34  117.2   0.0    8.7e-34  116.7   0.0    1.1  1  PF00069.20 Protein kinase domain
    3.3e-27   95.1   0.0    4.1e-16   58.7   0.0    2.0  2  PF07714.12 Protein tyrosine kinase
    0.00025   20.7   0.0    0.00048   19.8   0.0    1.5  1  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.045   12.4   0.0      0.066   11.9   0.0    1.2  1  PF07387.6  Seadornavirus VP7


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.7   0.0   2.5e-37   8.7e-34      72     256 ..      16     227 ..       8     229 .. 0.90

  Alignments for each domain:
  == domain 1    score: 116.7 bits;  conditional E-value: 2.5e-37
                 EEE.EEEE--SC-EHHHHHH...HHCCB.-HHHHHHHHHHHHHHHHHHHHT.....CEE-S--SGGGEEEETT--EEE------EEE.......................CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20  72 ely.lvleyveggdlfdllk...kegkl.seeeikkialqilegleylHsn.....giiHrDLKpeNiLldkkgelkiaDFGlakkl.......................eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilk 256
                 ++y +v+e++ gg+l+d+ k   k+  l s+ ei + al ++++leylH+        iHrDLKp+Ni +d+ g+lk+ DFGla ++                       + ++ +lt ++g+ +YmAPEv l ++ y + vD++s+ ++l+e+l ++ pf+g + ++++++++++  ++   +++     +++l++l+++ ++++ + R+++  i++
   MMETSP1325-20131115|386_1  16 NIYfIVVELLGGGTLSDMTKpnsKRPGLdSYCEILDQALALAQALEYLHEAadptlMTIHRDLKPDNIGFDQAGNLKLFDFGLAAQVprkyeealdkdteegaggggggrKLPRYQLTGQTGSVRYMAPEVAL-NRPYNEMVDTYSFSMVLWEMLHKQKPFQGMNVDTHRQVVCRDGVRPELDNSR-----PRDLTELLTQGWHQNLDCRPSFSVIVR 227
                 44449***************86533344799*******************99999999***************************************************99999*******************.******************************9999999999987754443332.....389******************988765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.0     3e-12     1e-08      75     156 ..      16     105 ..       5     118 .. 0.77
   2 !   58.7   0.0   1.2e-19   4.1e-16     163     258 ..     133     228 ..     125     229 .. 0.92

  Alignments for each domain:
  == domain 1    score: 34.5 bits;  conditional E-value: 3e-12
                 S.EEEEEE---B--HHHHHHHTGTTGS...BHHHHHHHHHHHHHHHHHHHHTT.....EEEST-SGGGEEEETTTEEEE-----CEESTTT CS
  PF07714.12  75 p.llivteyvkgGdLlefLrkkekekl...tlkdllkfalqiakGmeyLeskk.....lvHrdLaarNvLleeekvvkisDfGLardiekd 156
                 + ++iv+e++ gG+L+++ + + +++    ++ ++l+ al +a+++eyL++        +HrdL   N+  ++    k+ DfGLa ++ ++
   MMETSP1325-20131115|386_1  16 NiYFIVVELLGGGTLSDMTKPN-SKRPgldSYCEILDQALALAQALEYLHEAAdptlmTIHRDLKPDNIGFDQAGNLKLFDFGLAAQVPRK 105
                 34789*************9998.555401134567888999*********986667769***************************99332 PP

  == domain 2    score: 58.7 bits;  conditional E-value: 1.2e-19
                 TT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHHHH CS
  PF07714.12 163 eeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekpekcpeelyelmkqCweeepeeRptfkelvek 258
                 ++++ +v++mapE+  ++ +++  D +sf+++lwE++   ++p++g++  +  + + ++g r e  ++ p++l el++q w+++ + Rp+f+ +v++
   MMETSP1325-20131115|386_1 133 TGQTGSVRYMAPEVALNRPYNEMVDTYSFSMVLWEMLH-KQKPFQGMNVDTHRQVVcRDGVRPELDNSRPRDLTELLTQGWHQNLDCRPSFSVIVRR 228
                 456789*******************************9.67******999999999899*********************************99986 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.4e-07   0.00048     143     198 ..      52     102 ..      21     109 .. 0.69

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 1.4e-07
                 HHHHHHHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEETTTTEEEE---TT-BBE CS
  PF01636.18 143 elleeleervlaalaallpgaeppvllHgDlhpgNllvdpddgrvgviDfedaglg 198
                 + +++l++ +l+ l+++ +       +H+Dl+p+N+ +d+ ++   ++Df++a   
   MMETSP1325-20131115|386_1  52 Q-ALALAQ-ALEYLHEAAD--PTLMTIHRDLKPDNIGFDQAGNLK-LFDFGLAAQV 102
                 2.333333.6666666666..467789************555555.9****99765 PP

>> PF07387.6  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.9e-05     0.066     152     187 ..      58      96 ..      47     115 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.9e-05
  PF07387.6 152 kdLmdfhsest...nllhGDcnpenlmcDknGylklvDP 187
                ++L+ +h+       ++h D +p+n+  D+ G+lkl D 
  MMETSP1325-20131115|386_1  58 QALEYLHEAADptlMTIHRDLKPDNIGFDQAGNLKLFDF 96 
                55666665433122689*******************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.72
# Mc/sec: 928.59
//
Query:       MMETSP1325-20131115|387_1  [L=455]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-05   24.2   0.0    8.7e-05   22.5   0.0    1.9  2  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.37   5.1e+03      66      89 ..      58      80 ..      26     109 .. 0.59
   2 !   22.5   0.0   6.3e-09   8.7e-05       3     104 .]     350     453 ..     348     453 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.37
                TSSSSEEEEEETTTCEEEEEESSH CS
  PF00169.24 66 kesnnyfeitfkdvesyllsaese 89
                k +++ ++  +k + +  l +++e
   MMETSP1325-20131115|387_1 58 KREEYAVQHATKFK-EMQLLCKNE 80
                33344444444433.444444443 PP

  == domain 2    score: 22.5 bits;  conditional E-value: 6.3e-09
                 BEEEEEEEE.....TSSSCEEEEEEEEETTEEEEESSSST...TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTT.CEEEEEESSHHHHHHHHHHHHHHHH CS
  PF00169.24   3 keGyllkks.....ellktwkkryfvLtsnyLlyfksskk...ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdv.esyllsaeseeerkrWvqalknlls 104
                 k+G + kk+      +++ +++r+fvL +++L y+ + ++    +   +  ++ l+ c+v+ +          + n + ++   + ++++ +++se e+ +W++ l+ +++
   MMETSP1325-20131115|387_1 350 KHGHMFKKGggttlFGRSAFQRRFFVLEEGRLKYYHNAQEvaaGKPPLKNAIYTLRHCQVEAEGGL-------QLNIVPMKPAGGpRTLECKCDSEAELGEWMTVLRAATK 453
                 899999******999***********************9866666666666777777777777776.......7888888888889********************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.33s 00:00:01.11 Elapsed: 00:00:00.72
# Mc/sec: 1514.36
//
Query:       MMETSP1325-20131115|391_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.57
# Mc/sec: 272.69
//
Query:       MMETSP1325-20131115|390_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0032   15.5   0.1     0.0036   15.4   0.1    1.0  1  PF09763.4 Exocyst complex component Sec3
     0.0038   16.6   0.1      0.005   16.2   0.1    1.2  1  PF09873.4 Uncharacterized protein conserved in archaea (DUF2100)


Domain annotation for each model (and alignments):
>> PF09763.4  Exocyst complex component Sec3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   5.3e-07    0.0036     379     458 ..      29     109 ..      10     119 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 5.3e-07
  PF09763.4 379 pdrela.rkvrkamekifqflekelqalvdkvlkvdplqalgilvtlerkikeleesnqsflssv.lqkllekvkslfkkfv 458
                ++r+++ +k++ka +k+f++l +el+a +d+++ ++ l+ ++ilv+ e+ +  +  +++s++ ++ l+k   + k+++++ v
  MMETSP1325-20131115|390_1  29 EERSKQfAKKQKAFKKAFNSLLDELNAAIDDTECIEALRKMTILVQKEQDL-PAGMNKESLVKTIrLKKSAMTSKGSWQTPV 109
                4456666999***************************************99.444535555555468888888888888766 PP

>> PF09873.4  Uncharacterized protein conserved in archaea (DUF2100)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   7.3e-07     0.005      55     118 ..      12      76 ..       9      94 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 7.3e-07
  PF09873.4  55 ieadeyLyksaPeHeLneEeAkEfckllieaqehidkiLeefGveleteeelde.dalliVsnkk 118
                +  +eyL +  Pe    eE+ k f+k+  + +++ +++L+e+   ++++e ++   ++ i ++k+
  MMETSP1325-20131115|390_1  12 VAREEYLRDPTPEFLASEERSKQFAKKQKAFKKAFNSLLDELNAAIDDTECIEAlRKMTILVQKE 76 
                5679******************************************9999999886666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       695  (0.0508338); expected 273.4 (0.02)
Passed bias filter:                      524  (0.0383265); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.59
# Mc/sec: 552.38
//
Query:       MMETSP1325-20131115|388_1  [L=333]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       618  (0.0452019); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.62
# Mc/sec: 1287.08
//
Query:       MMETSP1325-20131115|392_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.68
# Mc/sec: 584.99
//
Query:       MMETSP1325-20131115|394_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        85  (0.00621709); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.69
# Mc/sec: 107.66
//
Query:       MMETSP1325-20131115|395_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-06   28.3   1.4    1.5e-06   28.3   1.0    2.9  2  PF09177.6  Syntaxin 6, N-terminal
     0.0016   18.2  15.9      0.021   14.5   4.2    2.3  2  PF08614.6  Autophagy protein 16 (ATG16)
     0.0018   17.4   0.5     0.0039   16.3   0.4    1.6  1  PF14257.1  Domain of unknown function (DUF4349)
     0.0019   17.0   1.4     0.0019   17.0   1.0    2.0  2  PF05508.6  RanGTP-binding protein
     0.0083   15.3   8.8     0.0083   15.3   6.1    2.0  2  PF12795.2  Mechanosensitive ion channel porin domain
  ------ inclusion threshold ------
      0.012   14.0  17.0      0.025   13.0  11.8    1.4  1  PF05667.6  Protein of unknown function (DUF812)
      0.015   15.1   7.0      0.015   15.1   4.8    2.6  3  PF11559.3  Afadin- and alpha -actinin-Binding
      0.016   14.7   6.9      0.016   14.7   4.8    2.6  2  PF05739.14 SNARE domain
      0.074   12.6   0.2       0.15   11.6   0.1    1.5  1  PF00578.16 AhpC/TSA family
       0.12   12.0   4.6       0.43   10.2   3.2    1.9  1  PF11414.3  Adenomatous polyposis coli tumour suppressor protein
        0.3   10.1   3.6        1.8    7.5   0.4    2.1  2  PF04582.7  Reovirus sigma C capsid protein
       0.32   10.0  18.3       0.25   10.4   8.7    2.1  2  PF11932.3  Protein of unknown function (DUF3450)
       0.33    9.2  19.0         29    2.8  13.1    2.0  1  PF13166.1  AAA domain
       0.35   10.5   4.6       0.15   11.7   0.6    2.3  2  PF05524.8  PEP-utilising enzyme, N-terminal
       0.44   10.4   0.1       0.44   10.4   0.1    3.8  4  PF06657.8  Centrosome microtubule-binding domain of Cep57
       0.45   10.2  13.2       0.55    9.9   4.5    2.6  2  PF07889.7  Protein of unknown function (DUF1664)
       0.63   10.1  16.4         14    5.8   0.0    3.4  3  PF05008.10 Vesicle transport v-SNARE protein N-terminus
        0.7    9.5  11.8      0.055   13.1   2.6    2.6  2  PF04859.7  Plant protein of unknown function (DUF641)
       0.76    9.4  15.4      0.072   12.7   4.6    2.5  2  PF06009.7  Laminin Domain II
       0.79    9.4   6.8       0.33   10.6   2.6    1.9  2  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
       0.95    9.3   3.5        4.4    7.2   1.5    2.7  2  PF06667.7  Phage shock protein B
          1    8.2   6.1       0.25   10.2   0.6    2.0  2  PF07851.8  TMPIT-like protein
        1.1    7.7  16.7      0.089   11.3   4.0    2.1  2  PF08317.6  Spc7 kinetochore protein
        1.1    8.7  17.7       0.85    9.1   5.0    2.2  2  PF03962.10 Mnd1 family
        1.2    8.8  20.7      0.052   13.2   6.2    2.3  2  PF12718.2  Tropomyosin like
        1.2    9.0  14.3        3.8    7.4   7.2    2.4  2  PF02050.11 Flagellar FliJ protein
        2.7    8.1  15.8        4.8    7.2   1.6    2.5  2  PF00804.20 Syntaxin
        3.5    5.6  11.2        5.7    4.9   7.7    1.3  1  PF09726.4  Transmembrane protein
        3.7    7.6   9.2         19    5.3   2.6    2.4  2  PF09969.4  Uncharacterized conserved protein (DUF2203)
        3.7    7.2  10.6         11    5.7   2.6    2.5  2  PF04822.8  Takusan
        4.9    6.7  18.3       0.86    9.2   6.2    2.3  2  PF07926.7  TPR/MLP1/MLP2-like protein
          5    6.7   8.6       0.47   10.0   0.5    2.5  3  PF03908.8  Sec20
        6.5    5.4  14.3          1    8.0   4.4    1.9  3  PF14362.1  Domain of unknown function (DUF4407)
        8.8    5.0  18.0        1.1    7.9   7.1    2.1  2  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        9.3    6.2  12.3        6.7    6.7   4.1    2.4  2  PF08702.5  Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   1.0   3.9e-09   1.5e-06       1      97 []      73     167 ..      73     167 .. 0.93
   2 ?    2.2   3.4      0.54   2.1e+02      22      62 ..     230     271 ..     187     294 .. 0.53

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 3.9e-09
  PF09177.6   1 DPFfevkeevqksidkleslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrRkqfvaeireeikevk 97 
                D F  vk++v + +++ ++l+++  ++ s+ +  +e  +l ++L++++++++  +  L++  +  e+ ++k + ++ee+ +Rk++v+++ +ei+e+k
  MMETSP1325-20131115|395_1  73 DEFLLVKDKVMDRLKEGRELLNRNATEASTMS-GTEKGKLSNDLRKCFRDAADMMAKLDQLQTS-ESRKKKSKFTDEELGKRKEIVNALSDEIEELK 167
                66999*******************99999987.9************************997655.8888888**********************986 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.54
  PF09177.6  22 rsweelrsdst.sskelkeltkeLenalesiewdledLeeav 62 
                +++ +   + +   ++l+ + +++++++e ++  + dL++ v
  MMETSP1325-20131115|395_1 230 DKFDQQIDTISaGIDQLNDKANQMKEQVEMTTVMIHDLDQQV 271
                222222222222333444444444444444444444444444 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   1.6    0.0025      0.99      98     158 ..     109     168 ..      74     173 .. 0.80
   2 !   14.5   4.2   5.4e-05     0.021      64     153 ..     203     292 ..     176     296 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0025
  PF08614.6  98 lllneeleekreeiaekekelaelqseiksleeeikdleeelkekekaletlqDElaslnl 158
                 +l+++l++  +++a   ++l++lq+  +s +++ k  +eel +++  ++ l+DE+  l++
  MMETSP1325-20131115|395_1 109 GKLSNDLRKCFRDAADMMAKLDQLQT-SESRKKKSKFTDEELGKRKEIVNALSDEIEELKV 168
                46788888888899999999999998.7888899999*******************99876 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 5.4e-05
  PF08614.6  64 gsdaaiaeleqklaklreelaelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkekekaletlqDEl 153
                g ++ + e+e++ +++r+el + ++++ ++ q++  ++  + +++ ++++ +++ +  +  i++l +++   +e+l + + +l+   DE 
  MMETSP1325-20131115|395_1 203 GGQVVKYEQEAVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKGTLDEV 292
                4567788999***********************************************************999999988888777777876 PP

>> PF14257.1  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.4   9.9e-06    0.0039     149     253 ..     220     316 ..     211     321 .. 0.65

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 9.9e-06
  PF14257.1 149 erllallekaetvedllevereLsrvqaeiEsleaqlryLddrvaystvtvelreeeaatpaeegfgtglkealregwdalvellagllvllvallpllplllvl 253
                + l+++++++++        +++ ++ a i++l+ + ++++++v + tv +    ++  + a+e+   +++e l++ +d +++     +  ++ ll ll l++v+
  MMETSP1325-20131115|395_1 220 QELQQIQQRKDK------FDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVS-AQEKLL-NVNEKLKGTLDEVTRGEGKCCMDIICLLLLLGLVAVA 316
                555555555554......459******************************877755444.333333.4555555555555554444444445555555555544 PP

>> PF05508.6  RanGTP-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.4      0.77     3e+02      91     136 ..     120     165 ..     103     168 .. 0.72
   2 !   17.0   1.0   4.8e-06    0.0019      37     108 ..     215     286 ..     203     305 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.77
  PF05508.6  91 eeieeldekleeaaeaeeekkssekekesikkvekeikeLLkriee 136
                ++  ++  kl+++ ++e +kk+s+ ++e++ k ++ ++ L ++iee
  MMETSP1325-20131115|395_1 120 RDAADMMAKLDQLQTSESRKKKSKFTDEELGKRKEIVNALSDEIEE 165
                3556677788888887777888888888888877777777777776 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 4.8e-06
  PF05508.6  37 kkvpekdkkeleklkkkleskikiispaidLIklvaargNtsLestvelikeLkeeieeldekleeaaeaee 108
                ++ + ++ +++++ k k++++i+ is  id ++ +a +  +++e t  +i++L++++ + +ekl ++ e+ +
  MMETSP1325-20131115|395_1 215 TSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLK 286
                33344444888999999***********************************************99888554 PP

>> PF12795.2  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.2   4.9e+02      59      82 ..     127     148 ..     110     181 .. 0.57
   2 !   15.3   6.1   2.1e-05    0.0083      34     104 ..     216     288 ..     211     295 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 1.2
  PF12795.2  59 qelealksaeeavkqelanlslsq 82 
                ++l++l+++  +++++ ++ + ++
  MMETSP1325-20131115|395_1 127 AKLDQLQTS--ESRKKKSKFTDEE 148
                333333333..3333333333333 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 2.1e-05
  PF12795.2  34 kkskqkadqyqkiiddapkelrelrqelealksa..eeavkqelanlslsqLeqelaqtssqLqelqeqlqqe 104
                 +++q+++q q++ d++ ++++++ + +++l+++  + +   e ++  + +L q++++++++L+++ e l+  
  MMETSP1325-20131115|395_1 216 SEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKanQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKGT 288
                4667777777777777777777777777777655555555578888999******************999865 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0  11.8   6.3e-05     0.025     240     382 ..      84     274 ..      61     291 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 6.3e-05
  PF05667.6 240 eyrkrkrqklekkiaellrqa..aqagteteersssaedladlvekfelesl....dkgsrftrtek............................................eeeaaeaaaevekaevkteedrtkerekelealqeqidelessieeveeeikalkskikeveeeleevkeeneeleeevkik 382
                ++ k+ r+ l++++ e  + +   +++ ++  r ++  d ad++ k ++ ++    +k s+ft++e                                             ++e   a +   ++ + ++e+ t+e+ +el+++q++ d+  ++i+++++ i +l++k ++++e++e + + +  l+++v  +
  MMETSP1325-20131115|395_1  84 DRLKEGRELLNRNATEASTMSgtEKGKLSNDLR-KCFRDAADMMAKLDQLQTsesrKKKSKFTDEELgkrkeivnalsdeieelkvaykggnaaaarpvnsllnmqdheifKKEPDGA-SGGGQVVKYEQEAVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSA 274
                555666666666665544333002233333344.888888888888655444677788888888877788888888888888899999999999999999999888888864444444.4445555555666799999***************************************9999999998887544 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       5.7   2.2e+03      78     106 ..      45      73 ..      36     117 .. 0.59
   2 ?   -0.8   1.9       2.9   1.1e+03      67     119 ..     107     158 ..      81     184 .. 0.52
   3 ?   15.1   4.8   3.7e-05     0.015      49     123 ..     224     298 ..     211     300 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 5.7
  PF11559.3  78 lktqleqlerelallqekerqlekklktl 106
                l   l++ + ++ + +++e++++   k+ 
  MMETSP1325-20131115|395_1  45 LLMALSDIQDKVGGPKREEAKINPAFKDD 73 
                55555555555555555555555444443 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 2.9
  PF11559.3  67 eierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqr 119
                e+ +l++++++  +  ++   +l++lq  e   +kk k + + l + ke ++ 
  MMETSP1325-20131115|395_1 107 EKGKLSNDLRKCFRDAADMMAKLDQLQTSESR-KKKSKFTDEELGKRKEIVNA 158
                44455555555555555555555544433322.22233333333333444444 PP

  == domain 3    score: 15.1 bits;  conditional E-value: 3.7e-05
  PF11559.3  49 rdleqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkni 123
                + ++ + ++ +++ +++a i++l+ k +++k+q+e ++  +  l ++  +++ kl + ++klk + +e++r + +
  MMETSP1325-20131115|395_1 224 QIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKGTLDEVTRGEGK 298
                4456677899*************************************************************8765 PP

>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       5.5   2.1e+03      31      50 ..     153     172 ..     147     179 .. 0.59
   2 ?   14.7   4.8   4.2e-05     0.016       3      56 ..     233     286 ..     232     290 .. 0.97

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 5.5
                 HHHHHHHHHHHHHHHHHHHH CS
  PF05739.14  31 gelldrIdnnvesassrver 50 
                  e+++ + +++e+ +   ++
   MMETSP1325-20131115|395_1 153 KEIVNALSDEIEELKVAYKG 172
                 45555666666665555555 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 4.2e-05
                 HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14   3 deeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlk 56 
                 d++++ ++++i  L++ +++m e ve  + ++ ++d++v sa++++ + n++lk
   MMETSP1325-20131115|395_1 233 DQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLK 286
                 89***********************************************99998 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00038      0.15      34      97 ..     211     274 ..     185     286 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00038
  PF00578.16  34 pkdfcpvCttelpalaelyeefkkkgvevigvsvdspeshkkfaeknelnfpllsDeegevaka 97 
                  ++ +  +++el++++++ ++f+++  ++ +   +  ++ ++++e+ e++  +++D +++v +a
   MMETSP1325-20131115|395_1 211 QEAVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSA 274
                 55789999***************7655555555555669999999999**********999865 PP

>> PF11414.3  Adenomatous polyposis coli tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.2    0.0011      0.43      21      81 ..     220     280 ..     215     289 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0011
  PF11414.3  21 qgLeklekardWYqqqlqnvqerqrelgrlgeafdfltdlqqerlevelariqevnrelqe 81 
                q+L  +++ +d + qq+  ++  +++l    ++++ + +++      + +++ ++ ++l +
  MMETSP1325-20131115|395_1 220 QELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLN 280
                799**************************************99999999999999998876 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1      0.08        31      56     123 ..     106     172 ..      78     193 .. 0.70
   2 ?    7.5   0.4    0.0046       1.8      54     124 ..     218     288 ..     206     302 .. 0.71

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.08
  PF04582.7  56 sklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevda 123
                ++  +ls dl++  +  +d+ a+l++l+t  +  ++s +    el +  e+v+a ++ + +l+   ++
  MMETSP1325-20131115|395_1 106 TEKGKLSNDLRKCFRDAADMMAKLDQLQTSESRKKKS-KFTDEELGKRKEIVNALSDEIEELKVAYKG 172
                4556899999999999**********99987766666.455667777777888777777777766554 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0046
  PF04582.7  54 issklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevdan 124
                  ++l +++   ++  + +d ++a +++l+ + +++++ v+  +  + dl + v + ++ l +++++ ++ 
  MMETSP1325-20131115|395_1 218 QRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKGT 288
                45666677777777777788888888888888888888888888888888777777777776666666555 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.12        48      36      72 ..     132     170 ..      93     192 .. 0.68
   2 ?   10.4   8.7   0.00063      0.25      29      99 ..     213     283 ..     205     291 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.12
  PF11932.3  36 aaaaqsqkkidkladqtqellaei.eqlqeevenlkv.y 72 
                 + ++s+kk++k++d++    +ei ++l++e+e+lkv y
  MMETSP1325-20131115|395_1 132 LQTSESRKKKSKFTDEELGKRKEIvNALSDEIEELKVaY 170
                345667778888888887777777345677777777743 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00063
  PF11932.3  29 eaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeiee 99 
                +++++  ++ +q q+++dk+++q +++ a i+ql+++++++k + +  + ++++ +q++ s qe++ +++e
  MMETSP1325-20131115|395_1 213 AVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNE 283
                56677778889999999999999999999999999999999999999999999999999999999887766 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8  13.1     0.073        29     311     469 ..     104     286 ..      64     293 .. 0.56

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.073
  PF13166.1 311 lseekensefkedveelkaelealeeeleklekaleeKlkdpfsslelesiadeie......................einelvdkinelirkhNe.....kidnlkeeknkakkklwlhlvaelkedideyekklkklekkinslekeleklekeikklekeikelekelkneeptaeeinkeLk 469
                +   +e+ ++ +d  +  + ++ +  +l++l+     K+k+ f++ el + +++++                       +n+l++    +i k          +  k e++++++++++ +++++++  d++++++  + + i +l++++++ +++++  +  i +l +++ ++++   ++n++Lk
  MMETSP1325-20131115|395_1 104 S--GTEKGKLSNDLRKCFRDAADMMAKLDQLQTSESRKKKSKFTDEELGKRKEIVNalsdeieelkvaykggnaaaarPVNSLLNMQDHEIFKKEPdgasgGGQVVKYEQEAVTSEQRQ-ELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLK 286
                3..33445556666666666666666666666666666666666666666666666333333333333333333333323333333333332222222222334444455555555544.335566666777888888888888888888888888888888899999999999999999999987 PP

>> PF05524.8  PEP-utilising enzyme, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1       3.3   1.3e+03      33      55 ..     145     167 ..     116     189 .. 0.62
   2 ?   11.7   0.6   0.00039      0.15      13      91 ..     204     293 ..     199     299 .. 0.68

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 3.3
  PF05524.8  33 veaEierleaAlekareeleela 55 
                +++E+ + ++ ++++++e+eel+
  MMETSP1325-20131115|395_1 145 TDEELGKRKEIVNALSDEIEELK 167
                44455555555555555555554 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00039
  PF05524.8  13 Gkavlleeee.aevpereasdveaEierleaAlekareeleelaeqlseel..........gaeeaaileahlllleDpelleeveerIr 91 
                G++v +e+e+  + +++e++++++ ++++++ +++ ++ +++l +++++             + ++++++a+ +ll+ +e l+ + ++++
  MMETSP1325-20131115|395_1 204 GQVVKYEQEAvTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKeqvemttvmiHDLDQQVVSAQEKLLNVNEKLKGTLDEVT 293
                888899988855555555599999999999999999999999999844433333555555445566777777777776666666666555 PP

>> PF06657.8  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1      0.81   3.2e+02      31      54 ..     117     140 ..     112     142 .. 0.83
   2 ?   10.4   0.1    0.0011      0.44       5      34 ..     139     171 ..     135     179 .. 0.82
   3 ?   -0.5   0.2       2.8   1.1e+03      44      59 ..     211     226 ..     206     249 .. 0.73
   4 ?    0.1   0.6       1.8   6.9e+02      19      53 ..     243     277 ..     233     292 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.81
  PF06657.8  31 meyqeladelkkldaslskrkrke 54 
                  +++ ad++ kld+ +++++rk+
  MMETSP1325-20131115|395_1 117 KCFRDAADMMAKLDQLQTSESRKK 140
                567889999999999999999985 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.0011
  PF06657.8   5 erpsqspkeaL...aevlkeLeDElehlkmeyq 34 
                 ++s+ + e+L   +e++++L DE+e+lk  y+
  MMETSP1325-20131115|395_1 139 KKKSKFTDEELgkrKEIVNALSDEIEELKVAYK 171
                566666778888889**************9997 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 2.8
  PF06657.8  44 daslskrkrkeLaqel 59 
                ++++++++r+eL+q  
  MMETSP1325-20131115|395_1 211 QEAVTSEQRQELQQIQ 226
                5677888888887644 PP

  == domain 4    score: 0.1 bits;  conditional E-value: 1.8
  PF06657.8  19 lkeLeDElehlkmeyqeladelkkldaslskrkrk 53 
                + +L D   ++k + +    ++ +ld+ + +++ k
  MMETSP1325-20131115|395_1 243 IDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEK 277
                67888899999988888888888888766665554 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.3      0.11        42      42     111 ..      98     169 ..      81     175 .. 0.66
   2 ?    9.9   4.5    0.0014      0.55      58     123 ..     213     275 ..     204     293 .. 0.59

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.11
  PF07889.7  42 adAvasvtkqlekvseavasakkhLsqridnldd..kldeqkeiskeikeevteiredlsaikedvkslkqv 111
                 +A +  + + +k+s+++ +  ++ ++ + +ld+  + +  k+ sk + ee+ + +e ++a+++++++lk +
  MMETSP1325-20131115|395_1  98 TEASTMSGTEKGKLSNDLRKCFRDAADMMAKLDQlqTSESRKKKSKFTDEELGKRKEIVNALSDEIEELKVA 169
                555555556666666666666666666666666421345566666777777777777777777777777665 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0014
  PF07889.7  58 avasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLesklesle 123
                av+s +++  q+i++  dk d+q +   +i+  + +++++ +++ke+v++ + +++ L++++ s +
  MMETSP1325-20131115|395_1 213 AVTSEQRQELQQIQQRKDKFDQQID---TISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQ 275
                4555555444444444444444433...44555666666666666666666666666666665443 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.036        14      29      69 ..      81     121 ..      79     126 .. 0.88
   2 ?    5.1   1.1     0.058        23       7      56 ..     124     171 ..     122     186 .. 0.86
   3 ?    5.7   3.3     0.037        15       4      49 ..     214     258 ..     212     292 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.036
  PF05008.10  29 eiekkldeaeellkqMelEvrnlpsserakykaklreykse 69 
                 ++  +l+e +ell++   E+++++ +e+ k+++ lr++ ++
   MMETSP1325-20131115|395_1  81 KVMDRLKEGRELLNRNATEASTMSGTEKGKLSNDLRKCFRD 121
                 5677899****************99***********87555 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.058
  PF05008.10   7 eikrklaslsklsgeerkaalreiekkldeaeellkqMelEvrnlpsser 56 
                 +  +kl++l+++  e+rk++ +  +++l   +e+++ ++ E+++l  +++
   MMETSP1325-20131115|395_1 124 DMMAKLDQLQTS--ESRKKKSKFTDEELGKRKEIVNALSDEIEELKVAYK 171
                 677899999987..99******************9999999999876666 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.037
  PF05008.10   4 llaeikrklaslsklsgeerkaalreiekkldeaeellkqMelEvr 49 
                 +++e ++ l++++++ +++  +++  i +++d++++  +qM   v+
   MMETSP1325-20131115|395_1 214 VTSEQRQELQQIQQR-KDKFDQQIDTISAGIDQLNDKANQMKEQVE 258
                 567789999****88.67***********************98775 PP

>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.8         1     4e+02      61      92 ..     115     146 ..      83     182 .. 0.59
   2 ?   13.1   2.6   0.00014     0.055      53     127 ..     220     294 ..     209     299 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 1
  PF04859.7  61 lkrlyrrkeakgsakdailaaeiqeqrsllkt 92 
                l++++r      ++ d+   +e  +++s+  +
  MMETSP1325-20131115|395_1 115 LRKCFRDAADMMAKLDQLQTSESRKKKSKFTD 146
                44444444444444444444444444444333 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00014
  PF04859.7  53 aeLkkLselkrlyrrkeakgsakdailaaeiqeqrsllktyeivvkkLeaelrakdseieelrekleeakkankk 127
                +eL+++++ k+ + ++  + sa+  +l  ++++ +++++   +++++L +++   +++  ++ ekl+  + +  +
  MMETSP1325-20131115|395_1 220 QELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKGTLDEVTR 294
                59****************************************************************988776655 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   1.0      0.63   2.4e+02      45      98 ..     110     167 ..      79     179 .. 0.50
   2 ?   12.7   4.6   0.00019     0.072       5      69 ..     222     286 ..     212     294 .. 0.56

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.63
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..........XXXXXXXXX CS
  PF06009.7  45 ekvksankavrdarrsvrkleklapqlldkLkklkkleeasqsrv.....lsrniseik 98 
                ++ ++  k  rda + + kl +l      k kk k   e+ + r+     ls++i+e+k
  MMETSP1325-20131115|395_1 110 KLSNDLRKCFRDAADMMAKLDQLQTSESRK-KKSKFTDEELGKRKeivnaLSDEIEELK 167
                344444455555555555444433222222.2222222222222222333666666666 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 0.00019
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF06009.7   5 akeAnetakeVlkelegistnventkaklsklngsveetnekvksankavrdarrsvrkleklap 69 
                +++++++  +  ++   is+ ++++ +k+++++++ve t+  +++  ++v +a+++  ++++++ 
  MMETSP1325-20131115|395_1 222 LQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLK 286
                44455555555555555555555555555555555555555555666666666665555555554 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       6.3   2.5e+03      64      64 ..     143     143 ..     102     170 .. 0.52
   2 ?   10.6   2.6   0.00085      0.33      27      96 ..     216     287 ..     202     294 .. 0.76

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 6.3
  PF04513.7  64 r 64 
                +
  MMETSP1325-20131115|395_1 143 K 143
                1 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00085
  PF04513.7  27 lqnvqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtl...rneLtnlnsiltn 96 
                + + q l q+++ +d+ ++q++++s+ + + l++ +++++++++  t  +  l +++   +++L n+n +l  
  MMETSP1325-20131115|395_1 216 SEQRQELQQIQQRKDKFDQQIDTISAGIDQ-LNDKANQMKEQVEMTTVMIHDLDQQVvsaQEKLLNVNEKLKG 287
                55556669********************99.677888888888888888888885542225667777777754 PP

>> PF06667.7  Phage shock protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   1.5     0.011       4.4      32      67 ..     210     245 ..     206     253 .. 0.85
   2 ?    1.6   0.0      0.63   2.5e+02      44      60 ..     243     259 ..     240     271 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.011
  PF06667.7  32 ksqglseedekeLeeLlekaekleeRietlErilda 67 
                +++ +++e ++eL++++++ +k+++ i+t+ + +d+
  MMETSP1325-20131115|395_1 210 EQEAVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQ 245
                467899***********************9887776 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.63
  PF06667.7  44 LeeLlekaekleeRiet 60 
                +++L +ka++++e +e 
  MMETSP1325-20131115|395_1 243 IDQLNDKANQMKEQVEM 259
                899**********9975 PP

>> PF07851.8  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.3      0.46   1.8e+02      28      82 ..     113     168 ..      79     187 .. 0.55
   2 ?   10.2   0.6   0.00064      0.25       7      68 ..     216     277 ..     202     317 .. 0.60

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.46
  PF07851.8  28 eeleklqekcasaikkqkkrlkelkkslkklkkk.....ltkeekekvekleeeikerka 82 
                ++l k  +++a+ +     +l +l++s  + kk+        + ke v+ l++ei+e k+
  MMETSP1325-20131115|395_1 113 NDLRKCFRDAADMM----AKLDQLQTSESRKKKSkftdeELGKRKEIVNALSDEIEELKV 168
                33333333333333....333333333222222221111333556666777777666665 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00064
  PF07851.8   7 kelekefkeleethkkykqkleeleklqekcasaikkqkkrlkelkkslkklkkkltkeeke 68 
                +e ++e +++++ ++k+ q+++ ++   ++  ++ ++ k +++ +++ +++l +++ + +++
  MMETSP1325-20131115|395_1 216 SEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEK 277
                34455555555555555555555555555555555555555555555555555553332222 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   2.1      0.12        47     158     243 ..      83     167 ..      60     192 .. 0.53
   2 ?   11.3   4.0   0.00023     0.089     202     267 ..     213     278 ..     203     295 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.12
  PF08317.6 158 leelkedeellnkklelinsilpklr.ekkealkeelasLrqlkdeleecdseeleklreeLss.leekieekrkkleeleeelqelk 243
                +++lke  elln+++++ + +    + ++++ l++     r+++d +++ d+ + ++ r++ s+ ++e++ ++++ ++ l +e++elk
  MMETSP1325-20131115|395_1  83 MDRLKEGRELLNRNATEASTMSGTEKgKLSNDLRKC---FRDAADMMAKLDQLQTSESRKKKSKfTDEELGKRKEIVNALSDEIEELK 167
                444555555555555554444332220222222222...3333334444444443333333322133444444444444444444443 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00023
  PF08317.6 202 eleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekil 267
                 +++ +++el+++++   + +++i+  +  + +l+++ +++k+++e ++  +++l +++ +a+++l
  MMETSP1325-20131115|395_1 213 AVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKL 278
                37788899************************************************9998877654 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   1.9      0.03        12      62     127 ..     106     171 ..      79     195 .. 0.86
   2 ?    9.1   5.0    0.0022      0.85      64     134 ..     215     286 ..     208     300 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.03
  PF03962.10  62 eakkklkteleklkkeleelkqrikelqaeiekekkkreeteereelleelkeleeelkklkkele 127
                 ++k kl ++l+k  ++ +++ +++++lq++ + +kk++  +ee  +  e +++l++e+++lk+ ++
   MMETSP1325-20131115|395_1 106 TEKGKLSNDLRKCFRDAADMMAKLDQLQTSESRKKKSKFTDEELGKRKEIVNALSDEIEELKVAYK 171
                 677789999999999999999999999999999999998889999999999999999999998776 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0022
  PF03962.10  64 kkklkteleklkkeleelkqrikelqaeiekekkkreeteeree.lleelkeleeelkklkkeleklakldp 134
                 ++++++el++++++ ++ +q+i+++ a+i++ + k ++ +e+ e +   +++l +++ + +++l ++++  +
   MMETSP1325-20131115|395_1 215 TSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEmTTVMIHDLDQQVVSAQEKLLNVNEKLK 286
                 5688999*************************9888888776663667789999999999999998776555 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   2.7      0.75   2.9e+02      10      92 ..      80     166 ..      77     176 .. 0.66
   2 ?   13.2   6.2   0.00013     0.052      27     105 ..     210     287 ..     204     294 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.75
  PF12718.2  10 enaqekaeeleek.lKeleqenekkEeeiksLqkKnqqlEeevekleeqlkeakekleekekkkteaealtrr...iqlLEeelees 92 
                ++ +++++e +e  ++++ + ++    e  +L++ +++   +   + ++l++ +++++ k+k k + e+l +r   ++ L +e+ee 
  MMETSP1325-20131115|395_1  80 DKVMDRLKEGRELlNRNATEASTMSGTEKGKLSNDLRKCFRDAADMMAKLDQLQTSESRKKKSKFTDEELGKRkeiVNALSDEIEEL 166
                556666665555314556666666666777777777777777777788888888888888888888888877734445566777665 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 0.00013
  PF12718.2  27 eqen..ekkEeeiksLqkKnqqlEeevekleeqlkeakekleekekkkteaealtrriqlLEeeleesekrLketteklre 105
                eqe+   ++ +e++++q+++++ +++++++ + +++ ++k++   + k+++e  t  i+ L++++ +++++L + +ekl+ 
  MMETSP1325-20131115|395_1 210 EQEAvtSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKAN---QMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKG 287
                555400555689**********************99998876...56788999*************************985 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1      0.23        91      19      65 ..     123     167 ..     107     189 .. 0.68
   2 ?    7.4   7.2    0.0098       3.8      15      90 ..     216     286 ..     208     289 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.23
  PF02050.11  19 ekleelqqyreeyrqqlsgsmqglsaaelrnyqafisaldeaiaqqq 65 
                 + + +  ++++  +++++ s    + +el + ++ ++al ++i++ +
   MMETSP1325-20131115|395_1 123 ADMMAKLDQLQTSESRKKKS--KFTDEELGKRKEIVNALSDEIEELK 167
                 33333333333333333333..3688999999999999999999877 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0098
  PF02050.11  15 eeaeekleelqqyreeyrqqlsgsmqglsaaelrnyqafisaldeaiaqqqqeleqaekqveqareewqeanqelk 90 
                  e++++l+++qq ++++ qq+   +     a + + +  +++++e+++  +  ++++++qv  a+e+++  n +lk
   MMETSP1325-20131115|395_1 216 SEQRQELQQIQQRKDKFDQQIDTIS-----AGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLK 286
                 5677888888888888888888888.....8888888888888888888888888888888888888888888877 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   1.6     0.012       4.8      35     101 ..     103     165 ..      72     167 .. 0.77
   2 ?    6.1   4.1     0.028        11      10      71 ..     216     277 ..     207     295 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.012
  PF00804.20  35 aspdpdkqtkeeleeltaeikklankirskLksleqsieqeegqnrssadlrirktqhstlsrkFke 101
                 +s +    +k +l +   +  ++a ++ +kL++l++s  ++++++ ++ +l  rk+ +++ls + +e
   MMETSP1325-20131115|395_1 103 MSGT----EKGKLSNDLRKCFRDAADMMAKLDQLQTSESRKKKSKFTDEELGKRKEIVNALSDEIEE 165
                 4444....5666666667777789999999999*9999999999****************9998877 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.028
  PF00804.20  10 eeIrgeiekisekveelkrlhsrilaspdpdkqtkeeleeltaeikklankirskLksleqs 71 
                 +e r+e+++i++  ++++++   i a  d+ +++ +++ e ++ ++ +++++ +++ s ++ 
   MMETSP1325-20131115|395_1 216 SEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEK 277
                 56788888888888888888888888888655566666666666666666666666666654 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   7.7     0.014       5.7     346     500 ..     135     288 ..      69     298 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.014
  PF09726.4 346 ktskrsksnsspkshksaagsvssssvkkneskdkkasksssgaldskkvisglsandtvkekkaeaklskpdalerLead..ikkLkaeLsaarkteselrskisllsslerslkselqqlkkendllqtklqelvsakqkekqslqslekrLkee 500
                ++s+++ks+   + + + +  v++ s    e ++ k + + ++a  +++v s l+ +d+   kk+  + s +  +++ e++      + eL++ ++ ++++ ++i+++s+   +l ++ +q+k++ ++    +++l ++    + +l +++ +Lk  
  MMETSP1325-20131115|395_1 135 SESRKKKSKFTDEELGKRKEIVNALSD---EIEELKVAYKGGNAAAARPVNSLLNMQDHEIFKKEPDGASGGGQVVKYEQEavTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKGT 288
                122222333333333332233332222...33444444445555666666666666665555555555555555666666521567899**************************************************999999999999999965 PP

>> PF09969.4  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.055        21      11      75 ..     111     172 ..     101     177 .. 0.69
   2 ?    5.3   2.6     0.049        19      22      81 ..     214     272 ..     205     289 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.055
  PF09969.4  11 llpeieelleevkelkaeleeleealeeaekeleaeelkeeleeleeqiraaieeieelGvevkd 75 
                l  ++++ ++++ ++ a+l++l+++++ ++k    + + eel + +e ++a  +eieel v  k+
  MMETSP1325-20131115|395_1 111 LSNDLRKCFRDAADMMAKLDQLQTSESRKKK---SKFTDEELGKRKEIVNALSDEIEELKVAYKG 172
                5567899999999999999999655555544...4566666666666666666667666665555 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.049
  PF09969.4  22 v.kelkaeleeleealeeaekeleaeelkeeleeleeqiraaieeieelGvevkdldegLv 81 
                v +e ++el++++++++++++++   +  + +++l+++ ++  e++e + v++ dld+ +v
  MMETSP1325-20131115|395_1 214 VtSEQRQELQQIQQRKDKFDQQI--DTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVV 272
                34678889999999999998887..566666777777777777777777788888887776 PP

>> PF04822.8  Takusan
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.4     0.039        15      19      56 ..     106     143 ..      95     168 .. 0.74
   2 ?    5.7   2.6     0.027        11      26      84 .]     220     276 ..     209     276 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.039
  PF04822.8  19 kelEeLklelrkitqeRnelrdiLdlytegslnyrlnp 56 
                 e+ +L+ +lrk+ ++  +++  Ld ++ ++  ++ + 
  MMETSP1325-20131115|395_1 106 TEKGKLSNDLRKCFRDAADMMAKLDQLQTSESRKKKSK 143
                56779*******************97766555544332 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.027
  PF04822.8  26 lelrkitqeRnelrdiLdlytegslnyrlnpeyeqlksqkekvmsdlhkleqeiieaqe 84 
                 el+ i+q ++   +  d  t ++  ++ln + +q+k q e++    h+l q++  aqe
  MMETSP1325-20131115|395_1 220 QELQQIQQRKDKFDQQID--TISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQE 276
                578888888877777666..77778889***************************9997 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   1.3      0.22        86      57     111 ..     111     167 ..      84     179 .. 0.55
   2 ?    9.2   6.2    0.0022      0.86      46     119 ..     208     283 ..     205     288 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.22
  PF07926.7  57 tiqeLtklkkelaelqkeaselrkeadsakael..neleekweeeksmLevelsele 111
                 ++ L+k   ++a++ +++++l+++   +k++   +e+ +k +e  ++L +e++el+
  MMETSP1325-20131115|395_1 111 LSNDLRKCFRDAADMMAKLDQLQTSESRKKKSKftDEELGKRKEIVNALSDEIEELK 167
                344444444444444444544444332222221114444444444444444444443 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0022
  PF07926.7  46 kYerelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksm...Levelselekkieelne 119
                kYe+e +  +e  qeL+++++  ++  ++++++ + +d+ +++ n+ +e+ e    m   L++++ ++++k+ ++ne
  MMETSP1325-20131115|395_1 208 KYEQEAV-TSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMihdLDQQVVSAQEKLLNVNE 283
                8999987.58999***********************************99998775522278889999999888887 PP

>> PF03908.8  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       9.9   3.9e+03      22      42 ..     140     160 ..     119     168 .. 0.54
   2 ?    6.5   3.0     0.015         6      13      67 ..     218     272 ..     209     280 .. 0.72
   3 ?   10.0   0.5    0.0012      0.47       9      82 ..     245     315 ..     243     320 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 9.9
  PF03908.8  22 qqSeenleeldastkslekle 42 
                ++S+ + eel +  + +++l+
  MMETSP1325-20131115|395_1 140 KKSKFTDEELGKRKEIVNALS 160
                344444444444444444444 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.015
  PF03908.8  13 isqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdk 67 
                 +q l+q  q+ ++  +++d+ +  + +l+++  q+++ ++++  ++  l+++ +
  MMETSP1325-20131115|395_1 218 QRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVV 272
                3444444444444445667788889**********************99998855 PP

  == domain 3    score: 10.0 bits;  conditional E-value: 0.0012
  PF03908.8   9 slraisqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglfla 82 
                +l +  ++++++v++ +  +++ld++   + +++e++ +v++ l+ + + v+  e + + d + ++l lgl  +
  MMETSP1325-20131115|395_1 245 QLNDKANQMKEQVEMTTVMIHDLDQQ---VVSAQEKLLNVNEKLKGTLDEVTRGEGKCCMDIICLLLLLGLVAV 315
                67888999***************986...678899999999999999999999999999998888888888655 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.4      0.53   2.1e+02     207     259 ..      98     166 ..      77     172 .. 0.42
   2 ?    6.1   8.1      0.01       4.1     116     228 ..     139     253 ..     119     268 .. 0.65
   3 ?    8.0   4.4    0.0027         1     114     166 ..     206     258 ..     191     292 .. 0.88

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.53
  PF14362.1 207 aaqaelean.................krkaaleeeraakvaeeqaan..sandGllaRleAlgeltkedpsa 259
                ++ +++ ++                      +++ ++ +++e+++++    +  l +R e+ ++l++e + +
  MMETSP1325-20131115|395_1  98 TEASTMSGTekgklsndlrkcfrdaaD---MMAKLDQLQTSESRKKKskFTDEELGKRKEIVNALSDEIEEL 166
                333333333334444444445532221...222222222222222222244555666666666666555444 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.01
  PF14362.1 116 ekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaq.aeletlkaqldaaqaelean....krkaaleeeraak 228
                +k+++ +++   ++++  +a   + ++   a++  +++a + vn + ++ + e++ ++  g  G G+v k  +ea+++ q +el++++++ d+  ++++          +l+++ +++
  MMETSP1325-20131115|395_1 139 KKKSKFTDEELGKRKEIVNALSDEIEELKVAYKGGNAAAARPVNSLLNMQDHEIFKKEPDGASGGGQVVKYEQEAVTSEQrQELQQIQQRKDKFDQQIDTIsagiD---QLNDKANQM 253
                4445555555555555555555555555556666777777888888888888888889999999998888888887777768899999998888888884453331...222222222 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.0027
  PF14362.1 114 lkekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevq 166
                + + +qe++++ q+q  +++++++ +++++i++++a +d+++++ n+++e+v+
  MMETSP1325-20131115|395_1 206 VVKYEQEAVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVE 258
                4555677777777777778***************************9998875 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   2.2      0.53   2.1e+02      58     119 ..     108     169 ..      76     196 .. 0.46
   2 ?    7.9   7.1    0.0029       1.1      53     142 ..     191     293 ..     147     296 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.53
  PF10186.4  58 aqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.asaqlekrrae 119
                + +l+++  ++ ++ + ++++++ql+   e+++++ +   e+l +r++ ++  s+++e+ + +
  MMETSP1325-20131115|395_1 108 KGKLSNDLRKCFRDAADMMAKLDQLQTS-ESRKKKSKFTDEELGKRKEIVNaLSDEIEELKVA 169
                3344444444444445555555554432.2222222222344555555555444444444444 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0029
  PF10186.4  53 e............kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklns.leslt 142
                e            ++  + ++ + +++++++++qi++r ++  ++i+  ++ i++l ++ +q ++++e+++ +   + +q+ + qe++   ++kl+  l+++t
  MMETSP1325-20131115|395_1 191 EifkkepdgasggGQVVKYEQEAVTSEQRQELQQIQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLKGtLDEVT 293
                3555555566666677777788888999999999999999999999999999999999999999999999999999999999999999999999988777765 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.3      0.23        91      32     125 ..      80     168 ..      73     177 .. 0.68
   2 ?    6.7   4.1     0.017       6.7      27      88 ..     225     286 ..     206     298 .. 0.62

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.23
                CCCCHHHCCHCCCCHHHHCHCCHHHHHHH.HHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF08702.5  32 kdvdkkieklenlLeqlanktkeieelvk.sikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLqevlrsneskiqrLeq 125
                 +v+ ++++ ++lL++ a + +++    k +++++l++ + +a d  ++ +++++s e++      kk    ++++   +e++++ + +i++L++
  MMETSP1325-20131115|395_1  80 DKVMDRLKEGRELLNRNATEASTMSGTEKgKLSNDLRKCFRDAADMMAKLDQLQTS-ESRK-----KKSKFTDEELGKRKEIVNALSDEIEELKV 168
                56777777777888887777777776654378888888888888888888888877.4443.....34444455666666666666666666666 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.017
                HCCCCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHH CS
  PF08702.5  27 ldkyekdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavsksle 88 
                +++ + ++d++i+++   ++ql++k ++++e+v++++ ++++  +q    +++  +v+++l+
  MMETSP1325-20131115|395_1 225 IQQRKDKFDQQIDTISAGIDQLNDKANQMKEQVEMTTVMIHDLDQQVVSAQEKLLNVNEKLK 286
                34455566666666666666666666666666666666665555444444444445555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1849  (0.13524); expected 273.4 (0.02)
Passed bias filter:                      778  (0.0569046); expected 273.4 (0.02)
Passed Vit filter:                       142  (0.0103862); expected 13.7 (0.001)
Passed Fwd filter:                        57  (0.0041691); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              35  [number of targets reported over threshold]
# CPU time: 1.18u 0.41s 00:00:01.59 Elapsed: 00:00:00.78
# Mc/sec: 989.27
//
Query:       MMETSP1325-20131115|398_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 367.72
//
Query:       MMETSP1325-20131115|397_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.71
# Mc/sec: 172.13
//
Query:       MMETSP1325-20131115|396_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.65
# Mc/sec: 298.62
//
Query:       MMETSP1325-20131115|399_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-26   92.0   0.0    3.8e-26   91.6   0.0    1.2  1  PF00175.16 Oxidoreductase NAD-binding domain
  ------ inclusion threshold ------
      0.039   13.5   0.0       0.07   12.7   0.0    1.5  1  PF13580.1  SIS domain
      0.045   13.4   0.0      0.087   12.5   0.0    1.6  1  PF08030.7  Ferric reductase NAD binding domain


Domain annotation for each model (and alignments):
>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.6   0.0   8.4e-30   3.8e-26       1     108 [.      11     126 ..      11     127 .. 0.93

  Alignments for each domain:
  == domain 1    score: 91.6 bits;  conditional E-value: 8.4e-30
                 EEE-----HHHHHHHHHHHCCH......CCCEEEEEEEESSGGGSTTHHHHHHHHHHSTTEEEEEEC.TTTTCSSSSBB--HHHHHHHCHHH..HHHCTTTEEEEEE-HHHHHHHHH CS
  PF00175.16   1 miaGGtGiaplrsvlkallede......detkvvlvyGvrteedlllreeleelakklpgrlkvvav.srtddgwkggkgyvtdalleelle..eeidkeetdvyvCGppgMakavr 108
                 m+a+GtGiap+rs++k+l+ +e       ++ ++l++Gv +++ ll+ eel+++++k p++++v +  sr+ +++kggk+y++d++ e+++e  e +d ++ ++y+CG +gM+  ++
   MMETSP1325-20131115|399_1  11 MVATGTGIAPYRSFWKRLFIEEtpaaeaYKGLAWLFLGVANSDALLYDEELQSIKTKFPDNFRVDYAlSREMENKKGGKMYIQDKVEEYADEifERLD-KGGHIYFCGLKGMMPGIQ 126
                 9******************98668999988******************************99998888******************888888*87885.5*************9876 PP

>> PF13580.1  SIS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.5e-05      0.07      18      52 ..      93     127 ..      77     139 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.5e-05
  PF13580.1  18 aeaiekaaeliaealknggvvfvfGnGhsaalaee 52 
                ++++e+ a++i+e+l++gg ++++G  +++   ++
  MMETSP1325-20131115|399_1  93 QDKVEEYADEIFERLDKGGHIYFCGLKGMMPGIQD 127
                789**********************7666555555 PP

>> PF08030.7  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.9e-05     0.087       3      89 ..       8      93 ..       6     148 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.9e-05
               xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF08030.7  3 nvllvagGiGitpfisilkdllkkskkealktkkikliwvvre..ssslewfkdvLneleeeksegnieihiYlTseyeaedasdqlis 89
                +++va G+Gi+p+ s+ k l+ ++   ++   +  l w++     s+  ++++ L++++++ +  n+++   l++e e ++  + +i+
  MMETSP1325-20131115|399_1  8 DIIMVATGTGIAPYRSFWKRLFIEET--PAAEAYKGLAWLFLGvaNSDALLYDEELQSIKTKFPD-NFRVDYALSREMENKKGGKMYIQ 93
               589*****************999887..5555566666666541133444566666666666666.77777777777766555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       538  (0.0393505); expected 273.4 (0.02)
Passed bias filter:                      485  (0.035474); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.19s 00:00:00.65 Elapsed: 00:00:00.64
# Mc/sec: 591.60
//
Query:       MMETSP1325-20131115|401_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-21   75.3   0.0    4.5e-21   74.9   0.0    1.2  1  PF04359.9 Protein of unknown function (DUF493)
  ------ inclusion threshold ------
       0.14   11.9   0.0        4.6    7.0   0.0    2.1  2  PF08022.7 FAD-binding domain


Domain annotation for each model (and alignments):
>> PF04359.9  Protein of unknown function (DUF493)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   6.5e-25   4.5e-21       4      83 ..      54     134 ..      52     136 .. 0.97

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 6.5e-25
  PF04359.9   4 lieFPcdytfkvigkagedfveavvevverha.pevddakvevkesskgkYvSvtvtvtveseeqvdaiyqeLkkherVkm 83 
                ++++P+d+++k++g  + df+ +++++v+r+  ++ +   +++++s kg+Y Sv++ ++v+s+e++ ++y+eL+k++rVkm
  MMETSP1325-20131115|401_1  54 TLDYPTDFQIKIVGLRQGDFASDLIDIVSRVTgQDSEGIPFSIRDSAKGTYCSVSIMTHVTSPEMLLKCYEELGKDPRVKM 134
                789*****************************9999********************************************9 PP

>> PF08022.7  FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.012        82      51      86 ..      50      85 ..      46      92 .. 0.86
   2 ?    7.0   0.0   0.00068       4.6      52      83 ..      93     124 ..      90     138 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.012
  PF08022.7 51 HPFtiasapeddkielvikaksgltkklakkllssl 86
                PF  ++ p d +i++v   ++++ + l   +++++
  MMETSP1325-20131115|401_1 50 RPFATLDYPTDFQIKIVGLRQGDFASDLIDIVSRVT 85
               59***********************99999888874 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.00068
  PF08022.7  52 PFtiasapeddkielvikaksgltkklakkll 83 
                PF+i +++++ ++++ i ++ +  + l k + 
  MMETSP1325-20131115|401_1  93 PFSIRDSAKGTYCSVSIMTHVTSPEMLLKCYE 124
                *****************999887777776544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.66
# Mc/sec: 544.63
//
Query:       MMETSP1325-20131115|400_1  [L=421]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-41  141.8   0.9    1.3e-40  138.9   0.0    2.6  3  PF00218.16 Indole-3-glycerol phosphate synthase
    4.8e-40  137.0   6.5      3e-34  118.1   2.2    3.6  3  PF00697.17 N-(5'phosphoribosyl)anthranilate (PRA) isomerase
     0.0039   16.3   0.2        1.8    7.6   0.2    2.6  2  PF00977.16 Histidine biosynthesis protein
  ------ inclusion threshold ------
      0.029   13.7   0.6       0.25   10.7   0.0    2.7  4  PF01729.14 Quinolinate phosphoribosyl transferase, C-terminal domain
        0.1   11.5   4.0        1.5    7.7   0.0    3.4  4  PF02581.12 Thiamine monophosphate synthase/TENI


Domain annotation for each model (and alignments):
>> PF00218.16  Indole-3-glycerol phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.9   0.0   4.7e-44   1.3e-40     131     254 .]       1     132 [.       1     132 [. 0.97
   2 ?   -0.3   0.0      0.15   4.1e+02     162     184 ..     143     168 ..     134     170 .. 0.61
   3 ?   -1.0   0.0      0.24   6.7e+02     137     173 ..     235     270 ..     226     281 .. 0.77

  Alignments for each domain:
  == domain 1    score: 138.9 bits;  conditional E-value: 4.7e-44
                 T-SEEEEECCCS-HHHHHHHHHHHCCTT---EEEESSHHHHHHHHH----EEEEESEETTTTEE-CHHHHHHCCTS........-T.SEEEEE----SHHHHHHHCCT.--EEEE--CCCC-TTHHHHHHHH CS
  PF00218.16 131 gadavLLivavlsdeeleelaeaakslgmevLvEvndeeeleralalgakliGvNnRnLktlevdletteeLaelvp.......kd.vllvaeSGiktredveklkkaganalLvGesLmraedvkkaikel 254
                 gad+ LLivavl+ +e+++l+ea++++g+e+LvEv++eeel++ala +ak++GvNnRnL+t++ dlett+++a + +       ++  +++a+SGi+ +edv+ +++ag+ ++LvGe+Lmra+d++k+i++l
   MMETSP1325-20131115|400_1   1 GADTLLLIVAVLEVSEVQRLIEACREWGIEPLVEVHTEEELDIALACDAKVVGVNNRNLHTFKLDLETTARIARQSEekcaklgREpPMILALSGISGPEDVRMYSDAGVCGVLVGETLMRATDPAKEIQTL 132
                 8************************************************************************9998899999966699**************************************99976 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.15
                 EEEESSHHHHHHHH...H----EEEE CS
  PF00218.16 162 LvEvndeeeleral...algakliGv 184
                 Lv v   +e e a+   ++ga+liGv
   MMETSP1325-20131115|400_1 143 LVKVCGVTEAEAAVaacQAGASLIGV 168
                 45544444433333224899999998 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.24
                 EECCCS-HHHHHHHHHHHCCTT---EEEESSHHHHHH CS
  PF00218.16 137 LivavlsdeeleelaeaakslgmevLvEvndeeeler 173
                 L+v v++++ +ee+   a++ g++v+   + +e+ e+
   MMETSP1325-20131115|400_1 235 LVVGVFQNQPAEEVKTLAEEAGVDVV-QFHGNEDEET 270
                 7899999999************9984.4554444444 PP

>> PF00697.17  N-(5'phosphoribosyl)anthranilate (PRA) isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.66   1.8e+03      51      93 ..       8      51 ..       4      79 .. 0.69
   2 !   13.8   0.0     1e-05     0.028       1      48 [.     144     191 ..     144     194 .. 0.95
   3 !  118.1   2.2   1.1e-37     3e-34      29     197 .]     212     411 ..     199     411 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.66
                B---BSSS-HHHHHHHHHHCTBS.EEEE-----HHHHHHHHHHS CS
  PF00697.17 51 lVgVfvnqpieevlriaqelgLd.lvQLHGsepaelakllksev 93
                +V+V + +++++  ++ +e g++ lv +H +e+ ++a + +++v
   MMETSP1325-20131115|400_1  8 IVAVLEVSEVQRLIEACREWGIEpLVEVHTEEELDIALACDAKV 51
                67777777777777777777776578888888777776666443 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 1e-05
                 TCE-------HCHHHHH----B---B--TTBTTB--HHHHHHHCCCS- CS
  PF00697.17   1 akicgltrsedvkkavkagadekglifaesskrqvseeqaeelreavr 48 
                 +k+cg+t++e +++a++aga   g+ifa++s+r v+   a+++ +avr
   MMETSP1325-20131115|400_1 144 VKVCGVTEAEAAVAACQAGASLIGVIFAPKSPRCVDIAGAKAVVSAVR 191
                 69*****************************************99997 PP

  == domain 3    score: 118.1 bits;  conditional E-value: 1.1e-37
                 TTBTTB--HHHHHHHCCCS---..B---BSSS-HHHHHHHHHHCTBSEEEE-----HHHHHHHHHHS-TTSEEEEEEE--...............----S-SSTT-..............SEEEEE......-----XXXXXXGGGGXXXXX....XXEEEXXXXXXXSHHHHHT....XXXXXXEEXGGGBSX...XXXBXHHHHHHHHHH CS
  PF00697.17  29 esskrqvseeqaeelreavrkl..lVgVfvnqpieevlriaqelgLdlvQLHGsepaelakllksevpvikalhvsasve...............eadlarradhv..............dllLlD......sgqGGtGelldwslvkkllkskeslkviLAGGltpenvseaik...lvkpvgvDvsSGVEte...pGvKDlekirafvka 197
                 +s+ ++++ + a++lr a r++  +VgVf+nqp+eev+ +a+e+g+d+vQ HG+e++e + ++   +p i++lh ++s e               e         +                +LlD      +++GGtG  +dw+l+k++ +  ++++vi+AGGl+  nv  a++   + + +gvD sSG E +   pG+KDl  +ra+v+a
   MMETSP1325-20131115|400_1 212 ASAATDWFGRGATALRAASRRTplVVGVFQNQPAEEVKTLAEEAGVDVVQFHGNEDEETVAAVG--MPAIRVLHIPSSDEesasasavdalmakiE---------TmataasshasdgqsVAILLDtkvpgaDSSGGTGAVFDWDLAKSIGET-HDVPVIVAGGLSDANVGSALDavgTDGLLGVDASSGLELDggkPGQKDLSRVRAYVEA 411
                 566889999********9996667****************************************..*********997664444443333333221.........122222223344444566777******99*****************85.59*******************999999************9888999*********985 PP

>> PF00977.16  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0024       6.5     193     223 ..      90     120 ..      78     125 .. 0.89
   2 !    7.6   0.2   0.00067       1.8     172     203 ..     337     368 ..     332     384 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0024
                 EEEE----SHHHHHHHHC----EEEESHCCC CS
  PF00977.16 193 viasGGvgsledlkelksegvdavlvgsalh 223
                 ++a  G++ +ed++   ++gv +vlvg+ l 
   MMETSP1325-20131115|400_1  90 ILALSGISGPEDVRMYSDAGVCGVLVGETLM 120
                 56889**********************9886 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.00067
                 -------HHHHHHHHHHHSSEEEEE----SHH CS
  PF00977.16 172 GtlsGpdlellkklaeavkipviasGGvgsle 203
                 Gt + +d +l k++ e  ++pvi++GG ++ +
   MMETSP1325-20131115|400_1 337 GTGAVFDWDLAKSIGETHDVPVIVAGGLSDAN 368
                 888889*********************98765 PP

>> PF01729.14  Quinolinate phosphoribosyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0     9e-05      0.25      67     156 ..      18     117 ..       6     127 .. 0.71
   2 ?   -1.4   0.0      0.48   1.3e+03     124     166 ..     138     180 ..     122     181 .. 0.69
   3 ?   -3.1   0.0       1.5   4.2e+03      91     108 ..     246     264 ..     226     281 .. 0.65
   4 ?   -1.1   0.0      0.37     1e+03     126     142 ..     354     370 ..     290     377 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 9e-05
                 HHHHHHHHHHHTTTS.EEEEESSHHHHHHHHHG--SEEEEES--HHHHHHHHHHHHHHTTT.............SEEEEE----TTTHHHHHH----EEE--- CS
  PF01729.14  67 eeavksarevvdkevkvevevenleeleealeagadiimLDnfsveelkeaveelkelagr.............vllevSGgvtlenveeyaktgvdvisvga 156
                 ++ +++ re   +     vev+++eel+ al+  a ++ + n +++++k  +e++ ++a++             ++l  SG   +e+v+ y + gv  + vg 
   MMETSP1325-20131115|400_1  18 QRLIEACREWGIEP---LVEVHTEEELDIALACDAKVVGVNNRNLHTFKLDLETTARIARQseekcaklgreppMILALSGISGPEDVRMYSDAGVCGVLVGE 117
                 44444444444443...59**********************99666665555544443333334455588889888888998889999999999987776665 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.48
                 HTTTSEEEEE----TTTHHHHHH----EEE---TTTSB----E CS
  PF01729.14 124 lagrvllevSGgvtlenveeyaktgvdvisvgalthsvkalDl 166
                 ++ + l++v G  + e   + ++ g   i+v ++ +s + +D+
   MMETSP1325-20131115|400_1 138 TKAQCLVKVCGVTEAEAAVAACQAGASLIGVIFAPKSPRCVDI 180
                 4445777777777777777778888888888888888888887 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 1.5
                 HHHHHHHH.G--SEEEEES CS
  PF01729.14  91 eeleeale.agadiimLDn 108
                 ee++  +e ag+d++++  
   MMETSP1325-20131115|400_1 246 EEVKTLAEeAGVDVVQFHG 264
                 4444444326677777654 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 0.37
                 TTSEEEEE----TTTHH CS
  PF01729.14 126 grvllevSGgvtlenve 142
                  +v + v+Gg+++ nv 
   MMETSP1325-20131115|400_1 354 HDVPVIVAGGLSDANVG 370
                 34788889999988885 PP

>> PF02581.12  Thiamine monophosphate synthase/TENI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.4     0.021        57      44      83 ..      16      59 ..      12     171 .. 0.84
   2 ?   -1.3   0.1      0.33     9e+02     128     166 ..     137     177 ..     128     190 .. 0.59
   3 ?   -2.0   0.0      0.54   1.5e+03      21      37 ..     252     267 ..     236     298 .. 0.64
   4 ?    7.7   0.0   0.00057       1.5     134     169 ..     340     375 ..     329     386 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.021
  PF02581.12 44 laeklaalcrkygvpliind....rvdlalavgadgvHlgqddl 83
                ++++l ++cr+ g++ +++     ++d+ala++a+ v +  ++l
   MMETSP1325-20131115|400_1 16 EVQRLIEACREWGIEPLVEVhteeELDIALACDAKVVGVNNRNL 59
                67888888888877777654223388999999999988877665 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.33
  PF02581.12 128 dtKkda..eplgleglkelaealeiPvvaiGGitlenvaev 166
                  tK +   +++g++ ++++++a++     iG i + + +++
   MMETSP1325-20131115|400_1 137 ATKAQClvKVCGVTEAEAAVAACQAGASLIGVIFAPKSPRC 177
                 44544444666666666666666666666666555555555 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 0.54
  PF02581.12  21 alkggvtlvqlRekeld 37 
                 a ++gv++vq+   e d
   MMETSP1325-20131115|400_1 252 AEEAGVDVVQFHGNE-D 267
                 334567777766555.3 PP

  == domain 4    score: 7.7 bits;  conditional E-value: 0.00057
  PF02581.12 134 eplgleglkelaealeiPvvaiGGitlenvaevlea 169
                 ++ +++++k + e+  +Pv++ GG++ +nv ++l+a
   MMETSP1325-20131115|400_1 340 AVFDWDLAKSIGETHDVPVIVAGGLSDANVGSALDA 375
                 56789999**********************998843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.83u 0.38s 00:00:01.21 Elapsed: 00:00:00.71
# Mc/sec: 1420.94
//
Query:       MMETSP1325-20131115|402_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-97  324.6   0.0    4.7e-97  324.4   0.0    1.0  1  PF01116.15 Fructose-bisphosphate aldolase class-II


Domain annotation for each model (and alignments):
>> PF01116.15  Fructose-bisphosphate aldolase class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  324.4   0.0  3.4e-101   4.7e-97       3     286 ..      19     364 ..      17     365 .. 0.97

  Alignments for each domain:
  == domain 1    score: 324.4 bits;  conditional E-value: 3.4e-101
  PF01116.15   3 vslkellkkAkengyAvpafnvnnletinavleaaeekksPvIlqvsegaakya..................gaealaalveaaaekasvpvalhlDHgak.....ledlleaiea........gfsSvMiDgSelpleeNiaitkevverahalgvsvEaElGriggeedgveneee.kealyTdpeeaeefvertgvda....lAvaiGnvHGvykpglepkldlellkeiqkavs.........dvpLvlHGgsgvpdeeiqeaiklGvvKiNidtdlqlaftkav.......rkylaeqpge...........ydprkllreaeeamkerveekievlgsagk 286
                 + l +l+k+Ak++g+A+pa+n+ +++t nav+eaa+++ksP+I+qvs+g+ +++                  g+ a+a++v+++a+ +++pv++h DH+ak     ++++++a +         +fsS+M+D+Se+  eeNiai+ ++++ + ++++++E+E+G++ggeedgv+ne++  e+lyT+pe+++e+++++  +     +A+a+GnvHGvykp  + kl+ e+l ++q++++         ++ Lv+HGgsg++d eiqea+++GvvK+Nidtd+q+a+++++       r+yl+ q g+           ydprk++reae++m +r++ ++e l+++gk
   MMETSP1325-20131115|402_1  19 DALIDLFKAAKQQGFAIPAVNCSSSSTCNAVMEAAAKAKSPIIIQVSQGGGQFLggkglddlgvdkmtasvaGSVAMAYHVRSVAKFYGIPVVIHSDHCAKkllpwFDGMMAANKDffektgepLFSSHMLDLSEETDEENIAICVKYFKQMVPMKIFLEMEIGITGGEEDGVNNEDVdPEKLYTTPEQVWEVYKALAPIGegfsVAAAFGNVHGVYKP-GNVKLSPERLGKHQAYTKaqlgcatdkPIFLVMHGGSGSTDAEIQEAVSNGVVKMNIDTDTQWAYWDGLrafeaksRDYLQGQIGNpdgpdkpnkkyYDPRKWVREAEKSMVKRTQLALEKLNATGK 364
                 56779*****************************************************************************************************999999999999999999***************************************************99999*****************99988999**************.56889999*********999*************************************************99999999999999999*************************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.85
# Mc/sec: 1161.53
//
Query:       MMETSP1325-20131115|403_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.55
# Mc/sec: 1002.11
//
Query:       MMETSP1325-20131115|393_1  [L=431]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-06   27.6   0.0    2.8e-06   26.8   0.0    1.4  1  PF09409.5  PUB domain
  ------ inclusion threshold ------
      0.042   13.7   0.0      0.094   12.6   0.0    1.6  1  PF00789.15 UBX domain
       0.18   11.3   2.3        5.7    6.5   0.7    2.8  2  PF07671.6  Protein of unknown function (DUF1601)


Domain annotation for each model (and alignments):
>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   6.1e-10   2.8e-06       5      65 ..      54     114 ..      51     135 .. 0.86

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 6.1e-10
  PF09409.5   5 efkkaleiLlkllkNIlknPneekyRrir.lsNktfkekilsvegavelLellGFkeeeeee 65 
                e+  +le+L ++++N+ ++P ++ yRr+   +N++++  + s+ ++  +L +lG+  ++   
  MMETSP1325-20131115|393_1  54 ELAPVLELLKTVVTNLHNHPGDPRYRRLPySTNRKLRAMLDSSTDGQAFLMALGYSMDKT-G 114
                667799**********************7368***********************99865.4 PP

>> PF00789.15  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.1e-05     0.094      16      67 ..     184     253 ..     169     260 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.1e-05
                 --EEEEEEESSSBHHHHHHHHHHHHSGCCTS.................EEEEE.SSSTEEETSCCSBCCC CS
  PF00789.15  16 GsrlvrrFkksdtvesvyeyvdshldekeep.................FkLlt.sfPrrlltksdktlse 67 
                 G+ + rrF++sdt++ v  + +  ++   +                  ++L++ ++++r++t +d  l+ 
   MMETSP1325-20131115|393_1 184 GTVIARRFDASDTLQHVMTWTEGSMELTRRGdrrddqaaaatdqpesqYQLVDrAQRNRAFTAEDXELDS 253
                 8999****************99888877766778889999999999999999624568999999876665 PP

>> PF07671.6  Protein of unknown function (DUF1601)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.017        77      15      34 ..     122     152 ..     116     152 .. 0.77
   2 ?    6.5   0.7    0.0013       5.7       4      30 ..     322     348 ..     320     350 .. 0.92

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.017
  PF07671.6  15 drLlaAIr...........rnaerFNpQsIA 34 
                 r  +A+r           ++  + +pQ+ A
  MMETSP1325-20131115|393_1 122 GRTVDAVRplyaralsilvQSLDQLSPQETA 152
                5666777777777888888*********965 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0013
  PF07671.6   4 kWqeleeQrLsdrLlaAIrrnaerFNp 30 
                + q++ e++L ++Ll+A r ++++F++
  MMETSP1325-20131115|393_1 322 RAQRRSERPLPSQLLKAHRDRHQAFSS 348
                668999*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       553  (0.0404476); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.65
# Mc/sec: 1588.97
//
Query:       MMETSP1325-20131115|404_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 583.84
//
Query:       MMETSP1325-20131115|405_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-21   75.0   0.1    7.3e-21   74.5   0.1    1.2  1  PF00258.20 Flavodoxin
     0.0091   15.8   0.0      0.017   15.0   0.0    1.4  1  PF12724.2  Flavodoxin domain
  ------ inclusion threshold ------
       0.19   11.7   1.1        2.3    8.2   0.0    2.2  2  PF02281.11 Transposase Tn5 dimerisation domain


Domain annotation for each model (and alignments):
>> PF00258.20  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   0.1   1.6e-24   7.3e-21       1     140 [.      21     171 ..      21     174 .. 0.83

  Alignments for each domain:
  == domain 1    score: 74.5 bits;  conditional E-value: 1.6e-24
                 EEEE-----HHHHHHHHHHHHHH.CTCEEEEEEGGGTTTC....HHHHHHHSEEEEEEEBCTCTSBEETTCHHHTTCHHHHHHG......GGGSCGTT-EEEEEECCHTTSSTTTTTHHHHHHHHHHCCEEEESE-EE-BTTTH.GGHHHHH CS
  PF00258.20   1 ilYgSetGnteklAkalaeglge.hgfnakvvslddydes....leeiehedlllvvtsTfgnGeppengesfaeellelkgke......eeagdlsnvrfavfglGdsaypkFcaagkaldekleelGaerllellegdednq.egqeeaf 140
                 ++YgSetG+t++  ka+a   g+ +g +  +++++  de+    ++  e++d ++v++s fg+G+ppe  + f  el++ +  +         ++l++v+ av g+G+  y+++++  +  d++le++G +r+l+ le+de+ + ++q +++
   MMETSP1325-20131115|405_1  21 VVYGSETGTTKRKVKAIASAWGSrAGKKFGTITVKSGDEAaadfTSIKEKYDAVVVGVSSFGDGDPPEGYQLFLGELYKPSKAPgegeekVARKPLEGVQHAVIGFGSTVYETYQNCPRLTDKLLEDVGSRRMLQRLEIDEMGAgSEQ-AEI 171
                 89********9988888877777344444455555555555568888899*****************99999999999999655****995667************************************************984444.345 PP

>> PF12724.2  Flavodoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.7e-06     0.017       1      52 [.      20      79 ..      20      91 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 3.7e-06
  PF12724.2  1 lilYsSrdGqTkkiaeriaeelkee....gelvdledveeeel....dlesydavilgas 52
               l++Y+S +G+Tk+ +++ia + +++      ++++++ +e++       e+ydav++g s
  MMETSP1325-20131115|405_1 20 LVVYGSETGTTKRKVKAIASAWGSRagkkFGTITVKSGDEAAAdftsIKEKYDAVVVGVS 79
               79***********99999988877776665556666655554401115678999999865 PP

>> PF02281.11  Transposase Tn5 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.039   1.8e+02      41      92 ..      25      77 ..       5      83 .. 0.74
   2 ?    8.2   0.0   0.00051       2.3      26      62 ..     167     203 ..     151     215 .. 0.79

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.039
                TT-----TTS----HHHHHHHHHH-----.-TT--------------HHHHHH CS
  PF02281.11 41 ldkgkrdkkekagslkwayqaiaklggft.dskrtgiaswtalwegwealqsk 92
                 + g  ++k ka +  w  +a  k+g +t  s     a +t++ e ++a+   
   MMETSP1325-20131115|405_1 25 SETGTTKRKVKAIASAWGSRAGKKFGTITvKSGDEAAADFTSIKEKYDAVVVG 77
                3567889999999999*999999999986245566778899999988887655 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00051
                 GGGTS-HHHHHH---TT-----TTS----HHHHHHHH CS
  PF02281.11  26 aetvleedeckllgrldkgkrdkkekagslkwayqai 62 
                  ++ ++  e kl+  l+kg r   +ka+s kw     
   MMETSP1325-20131115|405_1 167 EQAEIDAWEGKLFELLNKGSRADAKKAPSNKWDEGEF 203
                 55556677889*********************76555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       595  (0.0435196); expected 273.4 (0.02)
Passed bias filter:                      479  (0.0350351); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.61
# Mc/sec: 1017.47
//
Query:       MMETSP1325-20131115|408_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        70  (0.00511995); expected 273.4 (0.02)
Passed bias filter:                       67  (0.00490053); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 140.16
//
Query:       MMETSP1325-20131115|410_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       540  (0.0394968); expected 273.4 (0.02)
Passed bias filter:                      472  (0.0345231); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 243.63
//
Query:       MMETSP1325-20131115|407_1  [L=406]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-23   80.9   1.7    7.8e-23   79.8   1.2    1.6  1  PF00226.26 DnaJ domain
    3.3e-17   62.0   0.1      8e-15   54.4   0.0    2.5  2  PF01556.13 DnaJ C terminal domain
    4.6e-09   36.0   2.9    1.1e-08   34.9   2.0    1.5  1  PF00684.14 DnaJ central domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   1.2   1.7e-26   7.8e-23       1      64 []      29      87 ..      29      87 .. 0.96

  Alignments for each domain:
  == domain 1    score: 79.8 bits;  conditional E-value: 1.7e-26
                HHHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26  1 dyYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevLsdpekraeyd 64
                ++Ye Lgvpk+a+++eIkkaYrklal+ HPDk  +d+    e fk+i++ yevL+dpekr++yd
   MMETSP1325-20131115|407_1 29 ELYEHLGVPKTATAAEIKKAYRKLALQKHPDK-GGDP----EEFKKIQASYEVLKDPEKREKYD 87
                58******************************.7888....89********************8 PP

>> PF01556.13  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0     0.004        18      28      48 ..     206     226 ..     192     247 .. 0.76
   2 !   54.4   0.0   1.7e-18     8e-15       1      72 [.     256     336 ..     256     343 .. 0.90

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.004
  PF01556.13  28 kikvkippgtkpgeklrikgk 48 
                  ++v+i+pg++++ek+r++g+
   MMETSP1325-20131115|407_1 206 VLEVHIEPGMNHEEKIRFPGM 226
                 689***************986 PP

  == domain 2    score: 54.4 bits;  conditional E-value: 1.7e-18
  PF01556.13   1 dLiveleislkeAllGgtvevptldgrkikvkippgtkpgekl............rikgkGmpkkkns.nerGdLivkvnvkfPk 72 
                 dL +++e++l+eAl+G ++ v +ldgrki vk    +kpge++             ++g+Gmpkk+++ +e+G+L++ ++++fP+
   MMETSP1325-20131115|407_1 256 DLLIQKEVTLQEALCGYEFLVNHLDGRKILVK----SKPGEIIkpeaaqgepyikCVEGEGMPKKGTGgFEKGRLFIFFRIVFPE 336
                 8999****************************....6666666666666777799***********99****************7 PP

>> PF00684.14  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   2.0   2.3e-12   1.1e-08      14      56 ..     157     200 ..     150     204 .. 0.90

  Alignments for each domain:
  == domain 1    score: 34.9 bits;  conditional E-value: 2.3e-12
  PF00684.14  14 kvktCkkCnGsGvvvkeqr.apggvvqsqqtCekCkGkGkiiek 56 
                 ++k+C  CnG+G +++ ++  pg+v+q+qq+C++C+G+G+ ++k
   MMETSP1325-20131115|407_1 157 EPKQCGPCNGRGAIIRLRQlGPGMVQQIQQQCPDCNGSGYSVKK 200
                 789****************9********************9844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.74
# Mc/sec: 1314.76
//
Query:       MMETSP1325-20131115|413_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.31   10.5   1.3       0.37   10.3   0.4    1.6  1  PF08134.6 cIII protein family
       0.48   10.0   2.3       0.54    9.8   1.6    1.1  1  PF13630.1 SdpI/YhfL protein family


Domain annotation for each model (and alignments):
>> PF08134.6  cIII protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.4   5.4e-05      0.37       7      17 ..      36      46 ..      32      52 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 5.4e-05
  PF08134.6  7 aGsGvmsaFYP 17
               aGsGv saF+ 
  MMETSP1325-20131115|413_1 36 AGSGVTSAFFA 46
               9********85 PP

>> PF13630.1  SdpI/YhfL protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.6   7.9e-05      0.54      25      69 ..       7      57 ..       6      60 .] 0.71

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 7.9e-05
  PF13630.1 25 kahrfagkifiisGlillllgliililn......svillillllilvivii 69
                ah f+ k + ++ ++ll++g++ + l       + +++++ ++ l+++ +
  MMETSP1325-20131115|413_1  7 DAHTFSPKALGAFFFLLLAVGWVASSLAsagsgvTSAFFAFAAAGLIALCF 57
               59*********************8887789966644444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.66
# Mc/sec: 217.85
//
Query:       MMETSP1325-20131115|414_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.68
# Mc/sec: 398.22
//
Query:       MMETSP1325-20131115|411_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 300.50
//
Query:       MMETSP1325-20131115|412_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-16   60.0   0.0    2.4e-12   46.8   0.0    2.2  2  PF12796.2  Ankyrin repeats (3 copies)
    3.6e-13   49.5   0.1    1.6e-07   31.5   0.0    4.0  3  PF13637.1  Ankyrin repeats (many copies)
    1.3e-12   46.7   0.0    0.00091   18.8   0.0    3.7  4  PF00023.25 Ankyrin repeat
    3.2e-12   45.3   0.0      0.033   14.3   0.0    4.3  4  PF13606.1  Ankyrin repeat
      9e-11   41.5   0.1      0.001   19.0   0.0    4.3  4  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   8.8e-16   2.4e-12      27      84 ..      12      76 ..       3      81 .. 0.90
   2 !   11.0   0.0   0.00013      0.35       3      46 ..      92     137 ..      80     167 .. 0.64

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 8.8e-16
  PF12796.2 27 etpLhlAaeagnleivklLle.......agadvnakdkegntpLhlAvrnghlelvklLlekgad 84
               +tpL +A+e+g+lei+++L++          dv +kdk g+tp+++A+ nghl+++++L ++ga 
  MMETSP1325-20131115|412_1 12 RTPLWVAVENGQLEILEYLVQrekesgsTTSDVRTKDKFGWTPMYAAIDNGHLDCAQFLYDNGAQ 76
               79*******************8888887777889999*************************997 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00013
  PF12796.2   3 lAaengnlelvklLlekgadvdl..getpLhlAaeagnleivklLl 46 
                 A+ +g++ ++k+Ll+ g ++ +    +++  A+++ n+ +++ L+
  MMETSP1325-20131115|412_1  92 RAVCQGDIAALKWLLDRGGTISIggYASCVKEACRQANFRMLRELC 137
                3555556666666666555555543344555555555555555554 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   5.9e-11   1.6e-07       2      53 ..      12      70 ..      11      71 .. 0.87
   2 !   23.2   0.0   2.4e-08   6.6e-05       1      54 []      51     106 ..      51     106 .. 0.90
   3 ?    2.8   0.0     0.059   1.6e+02       3      23 ..     119     139 ..     117     164 .. 0.66

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 5.9e-11
  PF13637.1  2 ltaLhyaaisgrlelvklLlekgid.......inrtdesGntaLhiAalrgnieilklL 53
               +t+L +a+  g le++++L+++ ++       +  +d++G+t+++ A+ +g+++++++L
  MMETSP1325-20131115|412_1 12 RTPLWVAVENGQLEILEYLVQREKEsgsttsdVRTKDKFGWTPMYAAIDNGHLDCAQFL 70
               79******************6544445555559999**********************9 PP

  == domain 2    score: 23.2 bits;  conditional E-value: 2.4e-08
  PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrt..desGntaLhiAalrgnieilklLl 54 
                g+t++  a+  g+l+++++L+++g++ + +  d    +++ +A+  g+i +lk+Ll
  MMETSP1325-20131115|412_1  51 GWTPMYAAIDNGHLDCAQFLYDNGAQEDVLtgDLGDYSPVFRAVCQGDIAALKWLL 106
                5889988888****************999985666779*****************8 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.059
  PF13637.1   3 taLhyaaisgrlelvklLlek 23 
                +++  a+++ + ++++ L+  
  MMETSP1325-20131115|412_1 119 SCVKEACRQANFRMLRELCLL 139
                67789***********99854 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.1e-06     0.003       3      23 ..      12      32 ..      12      36 .. 0.94
   2 !   18.8   0.0   3.3e-07   0.00091       2      27 ..      51      76 ..      50      81 .. 0.92
   3 !    6.2   0.0    0.0031       8.5       4      28 ..      88     112 ..      86     116 .. 0.86
   4 ?   -3.2   0.0         3   8.2e+03       9      22 ..     124     137 ..     123     141 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.1e-06
                CBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25  3 fTPLHlAalrgnlevvklLls 23
                +TPL +A+++g+le++++L++
   MMETSP1325-20131115|412_1 12 RTPLWVAVENGQLEILEYLVQ 32
                6******************98 PP

  == domain 2    score: 18.8 bits;  conditional E-value: 3.3e-07
                SCBHHHHHHHTTHHHHHHHHHHTTSS CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAd 27
                G+TP   A+ +g+l+++++L ++GA 
   MMETSP1325-20131115|412_1 51 GWTPMYAAIDNGHLDCAQFLYDNGAQ 76
                9***********************96 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.0031
                 BHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   4 TPLHlAalrgnlevvklLlsqGAdl 28 
                 +P   A++ g++  +k+Ll++G  +
   MMETSP1325-20131115|412_1  88 SPVFRAVCQGDIAALKWLLDRGGTI 112
                 67778****************9765 PP

  == domain 4    score: -3.2 bits;  conditional E-value: 3
                 HHHTTHHHHHHHHH CS
  PF00023.25   9 AalrgnlevvklLl 22 
                 A++  n ++++ L 
   MMETSP1325-20131115|412_1 124 ACRQANFRMLRELC 137
                 88888889998886 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   1.4e-05     0.037       3      24 ..      12      33 ..      12      38 .. 0.94
   2 !   14.3   0.0   1.2e-05     0.033       1      27 [.      50      76 ..      50      81 .. 0.90
   3 !    8.9   0.0   0.00064       1.8       3      26 ..      87     110 ..      85     114 .. 0.88
   4 ?    2.4   0.0     0.079   2.2e+02       9      25 ..     124     140 ..     123     144 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.4e-05
  PF13606.1  3 nTpLhlAasngrielveaLlen 24
               +TpL +A++ng++e++e+L+++
  MMETSP1325-20131115|412_1 12 RTPLWVAVENGQLEILEYLVQR 33
               7******************985 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 1.2e-05
  PF13606.1  1 nGnTpLhlAasngrielveaLlengad 27
               +G+Tp++ A+ ng+++ +++L +nga+
  MMETSP1325-20131115|412_1 50 FGWTPMYAAIDNGHLDCAQFLYDNGAQ 76
               59***********************94 PP

  == domain 3    score: 8.9 bits;  conditional E-value: 0.00064
  PF13606.1   3 nTpLhlAasngrielveaLlenga 26 
                ++p + A+ +g i+++++Ll++g 
  MMETSP1325-20131115|412_1  87 YSPVFRAVCQGDIAALKWLLDRGG 110
                6899*****************985 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.079
  PF13606.1   9 AasngrielveaLleng 25 
                A+++ +  ++++L+  g
  MMETSP1325-20131115|412_1 124 ACRQANFRMLRELCLLG 140
                9************9765 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0     7e-05      0.19      18      39 ..      13      34 ..       3      46 .. 0.79
   2 !   19.0   0.0   3.8e-07     0.001       8      47 ..      43      82 ..      39      84 .. 0.88
   3 !    8.8   0.0   0.00062       1.7       3      40 ..      72     110 ..      72     117 .. 0.91
   4 ?    0.8   0.0      0.21   5.7e+02      23      36 ..     124     137 ..     111     151 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 7e-05
  PF13857.1 18 tpLhlAakggalevvrlLlapg 39
               tpL +A+++g+le++++L++++
  MMETSP1325-20131115|412_1 13 TPLWVAVENGQLEILEYLVQRE 34
               9******************554 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 3.8e-07
  PF13857.1  8 dvnatdeggntpLhlAakggalevvrlLlapgadlnlrds 47
               dv + d++g tp + A+ +g+l+++++L+++ga  ++ + 
  MMETSP1325-20131115|412_1 43 DVRTKDKFGWTPMYAAIDNGHLDCAQFLYDNGAQEDVLTG 82
               6778899999*******************99999888765 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.00062
  PF13857.1   3 ehg.padvnatdeggntpLhlAakggalevvrlLlapga 40 
                ++g ++dv + d+g ++p   A+ +g+  ++++Ll++g 
  MMETSP1325-20131115|412_1  72 DNGaQEDVLTGDLGDYSPVFRAVCQGDIAALKWLLDRGG 110
                5888999999*************************8876 PP

  == domain 4    score: 0.8 bits;  conditional E-value: 0.21
  PF13857.1  23 AakggalevvrlLl 36 
                A+++ +  ++r+L+
  MMETSP1325-20131115|412_1 124 ACRQANFRMLRELC 137
                56666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.32s 00:00:00.88 Elapsed: 00:00:00.73
# Mc/sec: 814.10
//
Query:       MMETSP1325-20131115|415_1  [L=525]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.3e-129  433.3   5.3   1.7e-129  432.9   3.6    1.1  1  PF00888.17 Cullin family
    1.4e-29  101.5   2.8    3.4e-29  100.3   2.0    1.7  1  PF10557.4  Cullin protein neddylation domain
     0.0092   16.1   0.2      0.049   13.8   0.1    2.3  2  PF13463.1  Winged helix DNA-binding domain
  ------ inclusion threshold ------
      0.023   14.3   0.4       0.81    9.3   0.1    3.0  2  PF05339.6  Protein of unknown function (DUF739)
      0.049   13.5   0.3        4.2    7.3   0.1    2.9  2  PF03965.11 Penicillinase repressor


Domain annotation for each model (and alignments):
>> PF00888.17  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  432.9   3.6  6.1e-133  1.7e-129     168     590 .]       2     422 ..       1     422 [. 0.98

  Alignments for each domain:
  == domain 1    score: 432.9 bits;  conditional E-value: 6.1e-133
  PF00888.17 168 efYkkea...lqessvseYlkkveerleeeeervkkylhestekklievvekvLieehletl....esefqklldnekiedLrrmYrllsrvpegleelkkaleehvkkeglelveklaeetdpkdyveellelhdklqslvseafkndaaflealdkafesfvnknasksaellAkYiDqllkksskkleeeeleekldeiitlfkyledkdvFekfYrklLakRLlneksasddaekkmiekLkeecgeeftsklevMlkDislskelnrkfkeelekqldkllkkidlsvkvLstgfWptlskeksfelPeelekalerfeefYekkksgRkLtWlhslgkvelklefedkt.yeltvstvqaaiLllFndkeeltveelseatklsedlltraLqsllsakvllelkseedeelednskfslnsnfs 590
                 +fY++e+   l+++++++Yl k+e+rl ee  rv+++l++ste kl++++e +Li++h +tl    +s+++ +l++ k+edL+rmY l+srvp++l+ l++++ ++v+k+g+elv + +  ++p  +v+ ll++ dk+++lv+eaf+++++ ++ l++afe+f+n + s++a +l+ YiD+llk+s+k+l+eee +  l+++i++f+yl+dkd+Fe+fY+++LakRLl+++s+s+dae++mi kLk+ecg++ftskle+M++D+s+ske +++f++  ++       +i+l v vL+tg+Wpt s  + + lP+el   +++f+ +Y +k++gRkLtW++++g+++lk+ f+ k+ +el+v+t+q +iL+lFn+++++++++  ++++++e +l+r++ sl   k     ks++++ + ++++f +n ++s
   MMETSP1325-20131115|415_1   2 DFYRRESldyLTQNTCPDYLTKAETRLGEEAARVNHFLNQSTEPKLKQITETELIYNHAKTLvemeNSGCVPMLKDGKVEDLKRMYDLFSRVPSTLDCLRDCMCDYVRKAGRELVTDQERVKEPVAFVKGLLDMRDKYDRLVTEAFRSEKKSQKKLKDAFEAFINAD-SRCASYLVLYIDELLKSSLKGLSEEEADVLLEKVIVIFRYLQDKDIFENFYKQHLAKRLLSGRSVSEDAERSMIAKLKQECGYQFTSKLEGMFTDMSISKETMEQFQRPEDS-------SIELEVSVLTTGYWPTPSVPP-CRLPQELLPVHDAFQAYYLAKHTGRKLTWQTNMGNADLKARFNAKNwHELNVTTYQLCILMLFNRTDTISLDDA-RELQIPESELKRHMISLCTPKHRILKKSSKGKGIGPDETFTFNTEYS 422
                 6**********************************************************************************************************************************************************************.***********************************************************************************************************99988.......9********************.*******************************************9999**************************5.689************99999988888*****************9885 PP

>> PF10557.4  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.3   2.0   1.2e-32   3.4e-29       1      67 [.     452     518 ..     452     519 .. 0.97

  Alignments for each domain:
  == domain 1    score: 100.3 bits;  conditional E-value: 1.2e-32
  PF10557.4   1 veedrkleieaaIVriMKsrktlshneLvaevieqlkkrfkpsvadiKkrIesLIekeYleRdeedk 67 
                veedr++ +eaaIVriMK+rktl hn+L+aev++ql +rf  ++a iKkrIesLIe+eYleR+ +d+
  MMETSP1325-20131115|415_1 452 VEEDRRHLVEAAIVRIMKARKTLRHNDLIAEVTRQLTSRFVAEPAFIKKRIESLIEREYLERETDDR 518
                79*************************************************************9886 PP

>> PF13463.1  Winged helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.7   4.7e+03      20      50 ..      43      74 ..      35      85 .. 0.71
   2 !   13.8   0.1   1.8e-05     0.049      11      60 ..     473     519 ..     461     523 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.7
  PF13463.1 20 tlaelskvlnidkstis.eslkeLvekGllek 50
               t + l + + ++   ++ + l e+ ++G + +
  MMETSP1325-20131115|415_1 43 TEPKLKQITETELIYNHaKTLVEMENSGCVPM 74
               55667777777777777788888888888854 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 1.8e-05
  PF13463.1  11 tlahrrrrktl.aelskvlnidkstiseslkeLvekGllektgdetddrek 60 
                tl+h++  +++ ++l+ ++ ++++ i + ++ L+e+++le++   tddr +
  MMETSP1325-20131115|415_1 473 TLRHNDLIAEVtRQLTSRFVAEPAFIKKRIESLIEREYLERE---TDDR-R 519
                567999999999**********99999************887...6667.3 PP

>> PF05339.6  Protein of unknown function (DUF739)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1    0.0003      0.81       6      39 ..      81     156 ..      78     241 .. 0.60
   2 ?   -3.0   0.0       1.9   5.1e+03      85     104 ..     313     336 ..     305     340 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0003
                HHHHHHHHHHHHHHHHHHHHHHHHHHHT---EE..........................................E CS
  PF05339.6   6 edlerayleykklkgkisalkevtidflekyga..........................................e 39 
                edl r y  ++++ + ++ l++ + d++ k+g                                           +
  MMETSP1325-20131115|415_1  81 EDLKRMYDLFSRVPSTLDCLRDCMCDYVRKAGRelvtdqervkepvafvkglldmrdkydrlvteafrsekksqkK 156
                6999****************************97777777666666666666644444444444444444433330 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 1.9
                HHHHHH...HH---E.EEEEETTT CS
  PF05339.6  85 kffreh...eradlk.iWvaneee 104
                  f+ +   +++++k +W++n+++
  MMETSP1325-20131115|415_1 313 DAFQAYylaKHTGRKlTWQTNMGN 336
                445555566666665379999876 PP

>> PF03965.11  Penicillinase repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.032        87      54     110 ..     322     379 ..     317     380 .. 0.93
   2 ?    7.3   0.1    0.0015       4.2       5      63 ..     461     524 ..     459     525 .] 0.71

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.032
                 EE----EEEEES-SSSTT-----XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXX CS
  PF03965.11  54 ekegrafiYsplvseeeavasavkqlldrlfegsvkelvaafveee.klsedeleeLr 110
                 +++gr+  ++ ++ + +++a+   +  ++l  + ++  ++ + +++ ++s d+++eL+
   MMETSP1325-20131115|415_1 322 KHTGRKLTWQTNMGNADLKARFNAKNWHELNVTTYQLCILMLFNRTdTISLDDARELQ 379
                 678************************************999999889******9997 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0015
                 HCHHHHHHCCSSSEEHH....HHHHCHHHHCS--HHHHHHHHHHCCCTTSEEEEE-.---EEEE CS
  PF03965.11   5 Eaevmeivwelgeatvk....evveeleeerelaysTVktllrrLvkKgllsreke.grafiYs 63 
                 Ea++ +i+ +++ +  +    ev  +l ++   +++ +k  ++ L ++++l+re++  r++ Y 
   MMETSP1325-20131115|415_1 461 EAAIVRIMKARKTLRHNdliaEVTRQLTSRFVAEPAFIKKRIESLIEREYLERETDdRRTYKYL 524
                 6666666666666655500005556666666678999******************966778886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       633  (0.046299); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.88u 0.38s 00:00:01.26 Elapsed: 00:00:00.72
# Mc/sec: 1747.34
//
Query:       MMETSP1325-20131115|416_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.63
# Mc/sec: 247.24
//
Query:       MMETSP1325-20131115|421_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-13   47.5   0.5    6.7e-09   35.2   0.1    2.5  2  PF13855.1  Leucine rich repeat
    3.4e-08   32.8  18.2    3.7e-05   23.1   1.8    2.7  3  PF12799.2  Leucine Rich repeats (2 copies)
    1.7e-05   24.1   7.8       0.13   12.3   0.0    4.0  3  PF00560.28 Leucine Rich Repeat
    3.8e-05   23.0   6.6       0.55   10.5   0.1    3.7  3  PF13504.1  Leucine rich repeat
    0.00026   20.6   2.9        1.7    8.8   0.1    3.8  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.1   2.5e-12   6.7e-09      19      61 .]     203     245 ..     194     245 .. 0.96
   2 !   10.2   0.0   0.00016      0.44       1      49 [.     255     301 ..     255     302 .. 0.90

  Alignments for each domain:
  == domain 1    score: 35.2 bits;  conditional E-value: 2.5e-12
  PF13855.1  19 gaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                +a++glsnLk L+L gnnl+ ++++ +++L+ L+ LnLs+++l
  MMETSP1325-20131115|421_1 203 DALGGLSNLKQLSLRGNNLQAFPAGGLADLYLLTVLNLSSCQL 245
                689*************************************997 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00016
  PF13855.1   1 pnLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLp 49 
                p+L++L L++Nrl+   d  ++g + L + +L+ n  +++ +++f+g+ 
  MMETSP1325-20131115|421_1 255 PKLRSLELQDNRLSGAVD--LSGSPELVSANLNQNMFSEVVANSFDGMA 301
                78***********96644..9999*********************9995 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   1.5e-06    0.0042      18      41 ..     204     226 ..     198     230 .. 0.86
   2 !   23.1   1.8   1.4e-08   3.7e-05       2      38 ..     210     247 ..     209     254 .. 0.90
   3 !   15.6   2.6   2.9e-06    0.0078       3      39 ..     235     273 ..     234     295 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.5e-06
  PF12799.2  18 pelanLpnLktLnLsnNpisdlsa 41 
                + l++L+nLk+L+L +N+++ ++a
  MMETSP1325-20131115|421_1 204 A-LGGLSNLKQLSLRGNNLQAFPA 226
                3.99***************98875 PP

  == domain 2    score: 23.1 bits;  conditional E-value: 1.4e-08
  PF12799.2   2 nLevLdLsnNnIkdlppe.lanLpnLktLnLsnNpisd 38 
                nL+ L+L++Nn++  p+  la L  L++LnLs+++++ 
  MMETSP1325-20131115|421_1 210 NLKQLSLRGNNLQAFPAGgLADLYLLTVLNLSSCQLEG 247
                9***************855****************985 PP

  == domain 3    score: 15.6 bits;  conditional E-value: 2.9e-06
  PF12799.2   3 LevLdLsnNnIkdlppelanLp.nLktLnLsnNpis...dl 39 
                L+vL+Ls+++++ l p    Lp +L++L L+ N++s   dl
  MMETSP1325-20131115|421_1 235 LTVLNLSSCQLEGLLP--RTLPpKLRSLELQDNRLSgavDL 273
                89***********988..55544************954544 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   4.6e-05      0.13       1      20 [.     210     230 ..     210     232 .. 0.88
   2 !    9.0   0.2   0.00052       1.4       2      17 ..     235     251 ..     234     255 .. 0.83
   3 ?    4.6   0.5     0.015        41       1      13 [.     256     268 ..     256     300 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.6e-05
                 TESEEEETSSBCBCHHHH.HH CS
  PF00560.28   1 nLeeLdLsgNnltslpps.ls 20 
                 nL+ L+L+gNnl+ +p + l 
   MMETSP1325-20131115|421_1 210 NLKQLSLRGNNLQAFPAGgLA 230
                 8*************9998776 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00052
                 ESEEEETSSBCB.CHHH CS
  PF00560.28   2 LeeLdLsgNnlt.slpp 17 
                 L++L+Ls+++l+  lp 
   MMETSP1325-20131115|421_1 235 LTVLNLSSCQLEgLLPR 251
                 89*********966665 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.015
                 TESEEEETSSBCB CS
  PF00560.28   1 nLeeLdLsgNnlt 13 
                 +L++L L++N+l+
   MMETSP1325-20131115|421_1 256 KLRSLELQDNRLS 268
                 69*********98 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1    0.0002      0.55       1      17 []     209     225 ..     209     225 .. 0.92
   2 !    9.7   0.4   0.00036      0.99       3      16 ..     235     248 ..     233     254 .. 0.88
   3 ?    4.4   0.0     0.022        59       1      14 [.     255     268 ..     255     276 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0002
  PF13504.1   1 pnLkeLdLsgnrLtsLP 17 
                +nLk+L+L+gn+L+ +P
  MMETSP1325-20131115|421_1 209 SNLKQLSLRGNNLQAFP 225
                69***********9887 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00036
  PF13504.1   3 LkeLdLsgnrLtsL 16 
                L++L+Ls+++L+ L
  MMETSP1325-20131115|421_1 235 LTVLNLSSCQLEGL 248
                8**********986 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.022
  PF13504.1   1 pnLkeLdLsgnrLt 14 
                p+L+ L L +nrL 
  MMETSP1325-20131115|421_1 255 PKLRSLELQDNRLS 268
                78**********95 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.1    0.0076        21       1      15 [.     208     222 ..     208     230 .. 0.85
   2 !    8.8   0.1   0.00061       1.7       4      17 ..     235     248 ..     232     254 .. 0.82
   3 ?    4.4   0.0     0.017        45       2      16 ..     255     269 ..     255     275 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0076
  PF13516.1   1 lknLtsLdLsnNqig 15 
                l+nL+ L L +N++ 
  MMETSP1325-20131115|421_1 208 LSNLKQLSLRGNNLQ 222
                79**********985 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00061
  PF13516.1   4 LtsLdLsnNqigde 17 
                Lt+L+Ls++q+ + 
  MMETSP1325-20131115|421_1 235 LTVLNLSSCQLEGL 248
                9*********9865 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.017
  PF13516.1   2 knLtsLdLsnNqigd 16 
                ++L+sL L++N +++
  MMETSP1325-20131115|421_1 255 PKLRSLELQDNRLSG 269
                68**********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.62
# Mc/sec: 1171.12
//
Query:       MMETSP1325-20131115|406_1  [L=524]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     4e-162  540.2  18.6   5.3e-162  539.8  12.9    1.1  1  PF00183.13 Hsp90 protein
      1e-11   44.4   0.4      1e-11   44.4   0.2    2.1  2  PF13589.1  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
    1.8e-11   43.5   0.1    3.4e-11   42.7   0.0    1.5  1  PF02518.21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
  ------ inclusion threshold ------
      0.076   12.6   0.8       0.14   11.8   0.1    1.8  2  PF10158.4  Tumour suppressor protein
      0.081   11.0   0.7       0.12   10.4   0.5    1.1  1  PF03387.9  Herpesvirus UL46 protein
          4    5.3   7.2        2.8    5.8   1.8    2.1  2  PF05327.6  RNA polymerase I specific transcription initiation factor RRN3


Domain annotation for each model (and alignments):
>> PF00183.13  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  539.8  12.9  2.3e-165  5.3e-162       1     325 [.     188     507 ..     188     512 .. 0.95

  Alignments for each domain:
  == domain 1    score: 539.8 bits;  conditional E-value: 2.3e-165
                 GGGSHHHHHHHHHHHHTT-SS-EEEEEEE---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXEXXXXXXXEEEEEEESXXSXGGGSXGGGSXHHHHHHHHHCCCTTTSXXSEEEEEEEXXXXXEEEEEEEXSSXXSTTTX..XXXXXXXSXEEETTEEEESSXTTSSXGGGTTXEXEEEESSSXSSSXCCCCCTXHHHHHHHHHHHHHHHHHHHCCHTCHHHHHCHHHHHHHCCCXXXXSXCCCHHHHHTTXEEEETTEEEEEEEHHHHHHCSXTTXXEEEEEXXXXHHHHCCSCCHHHHHHTTXXEEEXXSCCH CS
  PF00183.13   1 eyleekklkelvkkhsefisypiklvvekevekevpdeeeeeekeekeeeeekeeeekkeeeeeeeeeeeekkkktkkvkettteeellnktkpiWtrnpkdvteeeyaafyksltndwedplavkhfsveGqlefkallfvPkraPfdlfe..skkkknniklyvrrvfitddaedliPeylsfvkGvvdsedlPlnvsretlqqnkilkvirkklvkkalelikeiaedkedykkfyeefskniklGihedaanrkklakllrfestksedelvslkdyvtrmkeeqkkiyyitGeskkqvekspflerlkkknyevlyltdpvd 325
                 eylee++lk+lvkkhsefi++pikl+vek++ekev+d+e+eee++e+ e      +++k+e++ e e+ +ek kktkk+ke++++++ ln +kpiW+r++++vt eey afyksl+ndwed+ avkhfsveGqlef+++lf+P+raPfd+fe  +kkk+n iklyvrrvfi+d++edl+Pe+lsfvkGvvdsedlPln+sretlqqnkil+vi+k+lvkk++el++e+aed e+ykkfye+fskn+klGihed++nr+k+akllr++stks++e++sl+dyv+rm +eq  i+y+tGesk++ve+spfle+lkkk+yevly++dp+ 
   MMETSP1325-20131115|406_1 188 EYLEERRLKDLVKKHSEFIGFPIKLYVEKTEEKEVTDDEAEEEEDEEGE------DGPKIEDVSE-EDGKEKTKKTKKIKEVSHDWDHLNGQKPIWMRKSDEVTAEEYGAFYKSLSNDWEDHAAVKHFSVEGQLEFRSVLFIPRRAPFDMFEggNKKKHNAIKLYVRRVFIMDNCEDLMPEWLSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKSIELFNELAEDDEKYKKFYEAFSKNLKLGIHEDSTNRAKIAKLLRYHSTKSGEEMTSLDDYVSRMSDEQAGIFYVTGESKRAVENSPFLEKLKKKGYEVLYMVDPIG 507
                 8**************************************8774444333......3577877755.57789********************************************************************************9445699999********************************************************************************************************************************************************************95 PP

>> PF13589.1  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.2   4.6e-15     1e-11       2     102 ..      28     152 ..      27     190 .. 0.78
   2 ?   -2.9   0.2       1.9   4.2e+03      92     110 ..     253     271 ..     240     290 .. 0.61

  Alignments for each domain:
  == domain 1    score: 44.4 bits;  conditional E-value: 4.6e-15
  PF13589.1   2 sl.edAiaelvdNsldAdatn................vkisidedkkekseisieDnGkGmskeelvnal.klgrsskdeekeekt.......lGrkGiGmklAslklgrkvtviskkegeks.tlt 102
                s+ e  + el+ Ns dA  +                  +i++  +  + s+++ieD G Gm+k++l+n+l ++++s +++  e+ t       +G++G+G  ++++ ++++v+v+sk++++++ t++
  MMETSP1325-20131115|406_1  28 SNkEIFLRELISNSSDALDKIryqsltdpsvleaepsMEIHLIPN-AAASTLTIEDTGIGMTKADLINNLgTIAKSGTKAFMEALTagadismIGQFGVG-FYSAYLVADQVNVTSKNNDDEQhTWK 152
                66677899********97666678899999999999999999997.589*******************6536777766655443335566666*******.9999************9998884455 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.9
  PF13589.1  92 skkegekstltldvekiek 110
                +kk ++ ++++ d+++++ 
  MMETSP1325-20131115|406_1 253 TKKTKKIKEVSHDWDHLNG 271
                5555555566666666654 PP

>> PF02518.21  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.0   1.5e-14   3.4e-11       3     110 ..      31     184 ..      29     185 .. 0.92

  Alignments for each domain:
  == domain 1    score: 42.7 bits;  conditional E-value: 1.5e-14
                 HHHHHHHHHHHHHHHHHHHHHH..........SEEEEEEEEECTCEEEEEEE-----TH...........HHHHHHCSTTTCCSCSSGGGTT----THHHHHHCCEEEEEEEEECTC.........................T-CEEEEEEEEC CS
  PF02518.21   3 edrlrqivselvdNavkatees..........geievrvkreegelvieVeDnGiGipe...........edlervfepffqtdddsrkvggtGlGlsivkklvellggeieveske.........................ggGttvtlrlpl 110
                 e +lr+++s+  d   k  ++s          +++e+++ ++    ++++eD+GiG+++           +   + f++  ++++d +++g++G+G++++ +++++++++ + ++ e                         g+Gt+++l+l+ 
   MMETSP1325-20131115|406_1  31 EIFLRELISNSSDALDKIRYQSltdpsvleaePSMEIHLIPNAAASTLTIEDTGIGMTKadlinnlgtiaKSGTKAFMEALTAGADISMIGQFGVGFYSAYLVADQVNVTSKNNDDEqhtwkssaggsftvtadgednkmdiGRGTRIELTLKE 184
                 6788999999999999999999***************************************************************************************95555555999999999*********************9999975 PP

>> PF10158.4  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       4.2   9.5e+03      51      64 ..     252     265 ..     249     270 .. 0.69
   2 ?   11.8   0.1     6e-05      0.14      47      89 ..     382     425 ..     372     440 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 4.2
  PF10158.4  51 qnklvkrikevdak 64 
                + k +k+ikev+++
  MMETSP1325-20131115|406_1 252 KTKKTKKIKEVSHD 265
                55667888888876 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 6e-05
  PF10158.4  47 vaadqnklvkrike.vdakietllaelrekqkryasyaeqlskv 89 
                 + +qnk+ + ik+ + +k ++l++el e  ++y+++ e++sk 
  MMETSP1325-20131115|406_1 382 ETLQQNKILRVIKKnLVKKSIELFNELAEDDEKYKKFYEAFSKN 425
                5678*****9997536778889*******************994 PP

>> PF03387.9  Herpesvirus UL46 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.5   5.2e-05      0.12      53     165 ..     387     498 ..     377     503 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 5.2e-05
  PF03387.9  53 eeaLlkvrsnkvPeslivslvaeDtseeYireydeaikralaeaklsedavarvvlasYwkyLkassgldvpdseetekakqksvvlLfysvlekkplsk.aPfkkkkenaaYl 165
                ++ L+ +++n v  s+ + + + + +e+Y + y++ + ++l+  ++ ed+  r+ +a+  +y + +sg ++ + ++  +  +++ + +fy + e+k+ +  +Pf +k +++ Y 
  MMETSP1325-20131115|406_1 387 NKILRVIKKNLVKKSIELFNELAEDDEKYKKFYEA-FSKNLK-LGIHEDSTNRAKIAKLLRYHSTKSGEEMTSLDDYVSRMSDEQAGIFYVTGESKRAVEnSPFLEKLKKKGYE 498
                56788888889999987777777778899888865.555775.89************************************************999877527*****9999996 PP

>> PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.8    0.0012       2.8     227     284 ..     216     269 ..     202     299 .. 0.70
   2 ?    1.9   0.1     0.018        42     200     254 ..     386     439 ..     336     492 .. 0.76

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0012
  PF05327.6 227 deeeeellaeeeeeeeeelfdlddddseeesvesedeedeeakstkkikelsekLDai 284
                ++ee+e++++e eeee+e  ++  +    ++  se++ +e++k+tkkike+s+  D +
  MMETSP1325-20131115|406_1 216 KTEEKEVTDDEAEEEEDEEGEDGPK----IEDVSEEDGKEKTKKTKKIKEVSHDWDHL 269
                3444444444434433333332222....333344445667999999**999988865 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.018
  PF05327.6 200 sedileliierllklDvelqvelddlddeeeeellaeeeeeeeeelfdlddddse 254
                +++il +i + l+k  +el +el ++d e+ ++ +++ +++ + ++ +++++ ++
  MMETSP1325-20131115|406_1 386 QNKILRVIKKNLVKKSIELFNELAEDD-EKYKKFYEAFSKNLKLGIHEDSTNRAK 439
                567888888888888888888888866.455588888888888888887777733 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1213  (0.0887215); expected 273.4 (0.02)
Passed bias filter:                      529  (0.0386922); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.02u 0.36s 00:00:01.38 Elapsed: 00:00:00.67
# Mc/sec: 1874.17
//
Query:       MMETSP1325-20131115|422_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0023   17.2   3.0     0.0023   17.2   2.1    2.7  3  PF01391.13 Collagen triple helix repeat (20 copies)
  ------ inclusion threshold ------
        8.1    6.1   8.7         13    5.5   6.0    1.2  1  PF06459.7  Ryanodine Receptor TM 4-6


Domain annotation for each model (and alignments):
>> PF01391.13  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.6       1.3   8.8e+03      22      22 ..      39      39 ..      33      48 .. 0.45
   2 !   17.2   2.1   3.4e-07    0.0023      34      55 ..      62      83 ..      55      89 .. 0.35
   3 ?    1.4   1.6      0.03     2e+02      41      49 ..     134     142 ..     111     154 .. 0.46

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 1.3
  PF01391.13 22 G 22
                G
   MMETSP1325-20131115|422_1 39 G 39
                1 PP

  == domain 2    score: 17.2 bits;  conditional E-value: 3.4e-07
  PF01391.13 34 GekGppGaaGkpGapGekGeaG 55
                G  G++G  G++G  G++G  G
   MMETSP1325-20131115|422_1 62 GMMGQQGMMGQQGMMGQQGMMG 83
                1111111111111111111111 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.03
  PF01391.13  41 aaGkpGapG 49 
                 ++G +G  G
   MMETSP1325-20131115|422_1 134 QQGMMGMMG 142
                 111111111 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   6.0    0.0018        13       7      95 ..      78     166 ..      72     169 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0018
  PF06459.7   7 qdevhgdvleeekaeaeeeegseeeleetgeteeeevgsdafgldvkkeggk.rhdaepgLgdvsevepeepptpeeaaaekkelkeeee 95 
                q++++g+    +++  +++++ +++ ++  +++ +++++ +fg++ +  g+    ++++g+ +++  ++++   p++ +++++++++++ 
  MMETSP1325-20131115|422_1  78 QQGMMGQPQLSPQQMQQQQQMFAMQQQQ-MQMQAQQATMAQFGVQGHGQGQMgMMQPQQGMMGMMGQQQPQWGQPASMPQHQQQQQQQQP 166
                7888886655566555555555555555.455555555555****988888766***********9999999999999999985554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1164  (0.0851375); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.65
# Mc/sec: 630.43
//
Query:       MMETSP1325-20131115|417_1  [L=774]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-25   87.8  25.3    1.2e-06   28.0   0.1    8.3  8  PF00400.27 WD domain, G-beta repeat
     0.0012   16.6   1.2       0.18    9.4   0.1    3.2  3  PF04762.7  IKI3 family
     0.0031   16.9   0.4        2.9    7.3   0.0    3.9  3  PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
     0.0071   15.0   0.3        1.9    7.0   0.0    3.4  4  PF04053.9  Coatomer WD associated region


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0005       1.7       8      35 ..      12      38 ..       8      42 .. 0.91
   2 !   23.4   0.2     1e-08   3.5e-05      11      38 ..      55      87 ..      47      88 .. 0.96
   3 !   28.0   0.1   3.6e-10   1.2e-06       6      39 .]      99     132 ..      95     132 .. 0.94
   4 ?    1.2   0.0       0.1   3.4e+02      13      30 ..     147     165 ..     137     167 .. 0.88
   5 !   22.0   0.8   2.7e-08   9.3e-05       7      39 .]     183     215 ..     178     215 .. 0.95
   6 !   11.5   0.1   5.6e-05      0.19      13      37 ..     230     253 ..     225     255 .. 0.89
   7 ?    4.2   0.0     0.011        39      12      35 ..     269     292 ..     267     294 .. 0.90
   8 ?   -1.1   0.0      0.54   1.9e+03      14      27 ..     509     522 ..     507     532 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0005
                ESSSSSEEEEEEESSSTEEEEEETTSEE CS
  PF00400.27  8 rgHtspVtcvafspdgpllasgSrDgti 35
                +gH+  +t++ +  + + l+++S+D+ +
   MMETSP1325-20131115|417_1 12 DGHQEMCTALTWVTS-NELFTCSDDKQL 38
                79*************.*********976 PP

  == domain 2    score: 23.4 bits;  conditional E-value: 1e-08
                SSSEEEEEEESS.....STEEEEEETTSEEEEE CS
  PF00400.27 11 tspVtcvafspd.....gpllasgSrDgtirlW 38
                ++++t++++ pd      +++a+++ Dgt r+W
   MMETSP1325-20131115|417_1 55 EGFITSISWFPDvgkraANMFACACTDGTWRIW 87
                799****************************** PP

  == domain 3    score: 28.0 bits;  conditional E-value: 3.6e-10
                 EEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   6 tlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 ++++Ht++V +v+++ dg+ l+s+++Dg +++W+
   MMETSP1325-20131115|417_1  99 KISAHTGAVISVKWNWDGSALISAGEDGELKVWS 132
                 6789*****************************7 PP

  == domain 4    score: 1.2 bits;  conditional E-value: 0.1
                 SEEEEEEESS.STEEEEEE CS
  PF00400.27  13 pVtcvafspd.gpllasgS 30 
                 +V+c  + pd  ++l +++
   MMETSP1325-20131115|417_1 147 AVYCFVWGPDnDTVLYTAG 165
                 79********999999987 PP

  == domain 5    score: 22.0 bits;  conditional E-value: 2.7e-08
                 EESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   7 lrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 + +H + + c++++    l++sg++D+  ++Wd
   MMETSP1325-20131115|417_1 183 WNAHDGIIMCCDWNRINDLIVSGGEDCIYKVWD 215
                 679*****************************9 PP

  == domain 6    score: 11.5 bits;  conditional E-value: 5.6e-05
                 SEEEEEEESSSTEEEEEETTSEEEE CS
  PF00400.27  13 pVtcvafspdgpllasgSrDgtirl 37 
                  +t+++++p+g ++a g + +++rl
   MMETSP1325-20131115|417_1 230 VITSISWCPNGECFAVGAY-NSLRL 253
                 59***************99.88876 PP

  == domain 7    score: 4.2 bits;  conditional E-value: 0.011
                 SSEEEEEEESSSTEEEEEETTSEE CS
  PF00400.27  12 spVtcvafspdgpllasgSrDgti 35 
                 +++  +a+  dg+ la ++ +g++
   MMETSP1325-20131115|417_1 269 GSIMEIAWTSDGTQLAGAGGNGSV 292
                 78899***************9998 PP

  == domain 8    score: -1.1 bits;  conditional E-value: 0.54
                 EEEEEEESSSTEEE CS
  PF00400.27  14 Vtcvafspdgplla 27 
                 V ++a+++++ +la
   MMETSP1325-20131115|417_1 509 VDSMAWNDSSDMLA 522
                 6699*****88877 PP

>> PF04762.7  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1   5.3e-05      0.18     198     266 ..      94     156 ..      64     174 .. 0.77
   2 ?   -0.3   0.0     0.044   1.5e+02     239     275 ..     212     248 ..     179     293 .. 0.61
   3 !    3.7   0.0    0.0027       9.3     303     335 ..     506     538 ..     497     552 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 5.3e-05
  PF04762.7 198 evdegklselddskvtIsWRgDGeyfAvssieeetgerrvirVysreGaLdsvsekvdgleeaLaWkPs 266
                  +e+k+s++    +++ W +DG  + +s    e g    ++V+sr G+L s+  +      ++ W P 
  MMETSP1325-20131115|417_1  94 AREEKKISAHTGAVISVKWNWDGSAL-ISAG--EDG---ELKVWSRSGNLRSSLTSAGTAVYCFVWGPD 156
                468999999999999*******9855.3333..444...899*******99987777777777777775 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.044
  PF04762.7 239 rVysreGaLdsvsekvdgleeaLaWkPsGslIAstqr 275
                +V++  G     s ++ ++  +++W P+G+  A+ + 
  MMETSP1325-20131115|417_1 212 KVWDAYGRQLFQSQPNVYVITSISWCPNGECFAVGAY 248
                5555555555555555555555666666665555443 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.0027
  PF04762.7 303 eekvesLaWnsdSevLavsledrvqlwttgNyh 335
                + +v s+aWn  S++La++   r+  w   N  
  MMETSP1325-20131115|417_1 506 QTQVDSMAWNDSSDMLAAIADGRLICWYYPNVV 538
                45789***************9999999988865 PP

>> PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.069   2.4e+02      14      27 ..     190     203 ..     166     208 .. 0.81
   2 ?    3.1   0.0     0.019        63      14      28 ..     231     245 ..     220     253 .. 0.78
   3 !    7.3   0.0   0.00086       2.9      10      37 ..     505     531 ..     501     532 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.069
  PF12894.2  14 vkfiswcPtmDLiA 27 
                + +++w+  +DLi 
  MMETSP1325-20131115|417_1 190 IMCCDWNRINDLIV 203
                679*********96 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.019
  PF12894.2  14 vkfiswcPtmDLiAl 28 
                + +iswcP  + +A+
  MMETSP1325-20131115|417_1 231 ITSISWCPNGECFAV 245
                789*****9877776 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.00086
  PF12894.2  10 lparvkfiswcPtmDLiAlatekgelal 37 
                l  +v++++w+ + D +A a+++g l++
  MMETSP1325-20131115|417_1 505 LQTQVDSMAWNDSSDMLA-AIADGRLIC 531
                7788**************.788998876 PP

>> PF04053.9  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.3   0.0    0.0076        26      51     169 ..     124     253 ..      75     279 .. 0.70
   2 ?    1.8   0.0     0.021        72      33      83 ..     228     284 ..     220     304 .. 0.73
   3 ?   -1.8   0.0      0.27   9.4e+02     120     206 ..     432     516 ..     423     527 .. 0.64
   4 !    7.0   0.0   0.00056       1.9     341     387 ..     608     654 ..     601     657 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.0076
  PF04053.9  51 gdgeyiiyt...alawrnkaygkal.dfvwvssnrfavleksksvkifknfkekktksikleysvekifg.......GalLgvksesfis.fYDweqkklvr.ridvkkvknViwsddgelvalvskdtvyi 169
                +dge ++ +   +l  + ++ g+a+  fvw+  n+ ++++  k+++  k+ +++  k+++ +   ++i+        + l++   e++i+ ++D   ++l + + +v  ++ + w+++ge  a+ + +++ +
  MMETSP1325-20131115|417_1 124 EDGELKVWSrsgNLRSSLTSAGTAVyCFVWGPDNDTVLYTAGKTLNM-KSHQGTGRKALSWNA-HDGIIMccdwnriNDLIVSGGEDCIYkVWDAYGRQLFQsQPNVYVITSISWCPNGECFAVGAYNSLRL 253
                56666666654433333344444432689999999999999999999.999888888888775.77777778888888888888888665345555555544133466688888888888777665555544 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.021
  PF04053.9  33 iy.pqslshnpngrfvlVcgdgeyiiyt....alawrnkaygkaldfvwvs.snrfa 83 
                +y ++s+s  png++++V   ++  ++     + + ++ + g+ ++ +w s  ++ a
  MMETSP1325-20131115|417_1 228 VYvITSISWCPNGECFAVGAYNSLRLCDktgwSYSREQPQSGSIMEIAWTSdGTQLA 284
                444899************999999999855555555677889999999998444455 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 0.27
  PF04053.9 120 LgvksesfisfYDweqkklvrridvkkvknViwsddgelvalvskdtvyilsynleavee..deeegvedafevlhelseriksgaWvg 206
                L  ++++++  +D++++k ++   ++k + V    +++ v l s++ + ++++n++ +    +++ g    f  +++l+++++s aW +
  MMETSP1325-20131115|417_1 432 LDRTDSKTVRCFDVATGKALSTNVTHKAEIVQIALNQSDVPL-SERRLALIDRNRDLYLTpvVPQPG---IFRGVYKLQTQVDSMAWND 516
                555666677778888877776555555344444444444443.477777777777766656666666...5666677777888888866 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.00056
  PF04053.9 341 akeldseekWkkLgdaAlsqgniklaeeayqkakdfdkLllLylstg 387
                ++  ++++ W  L+ +A+++ +++ ae a+    ++dkL +++ + +
  MMETSP1325-20131115|417_1 608 CRFVKDDKLWGCLAVMAIQNRKLETAEIALAALTEVDKLEFILHIKN 654
                55667899*********************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (774 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.20u 0.35s 00:00:01.54 Elapsed: 00:00:00.86
# Mc/sec: 2156.72
//
Query:       MMETSP1325-20131115|425_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.59
# Mc/sec: 389.92
//
Query:       MMETSP1325-20131115|424_1  [L=430]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-15   57.3   0.0    1.7e-15   56.8   0.0    1.1  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.0   1.3e-19   1.7e-15      44     201 ..     224     402 ..     206     413 .. 0.82

  Alignments for each domain:
  == domain 1    score: 56.8 bits;  conditional E-value: 1.3e-19
                 HHHHHH-------TTT--------B-HHHHHHHT.T----.CCHHHTT-HHHHHHHHHHH..HS--GG...G.T-BSEE.EEE--....................--EEEEES-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH----- CS
  PF00632.20  44 lklfkflGkligkaiyegilldlpfsraflkflllgkkvt.ledleeidpelanslkellelessteavedl.altFtieedkke....................deielvelipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdk 201
                  +++  lG++ig a+ +g+ l+l ++ +++k ll +++ +  edl e d el n +++l +le+     ++  +l F  e++++                     ++ e+v l  + +++  + +  ++Y  l+  ++l e  ++q++a+r+G+ +vip++al+l+++ el++ +c s++
   MMETSP1325-20131115|424_1 224 VSWYFALGQVIGMAMRTGVRLPLALPSLVWKGLLGQVSTNpTEDLLETDVELSNVVECLGSLEALGVTQDNYrSLFFAEESESATdggggggpgarplispvavtATGEQVPLFRGARQVALEYDGAKLYAALLQRARLAE-GRPQIRAMRDGLTSVIPRDALALLSWAELKSAVCLSER 402
                 57899*****************************434444689*****************999877765566778888554444446555555554444444333333669**9999************************.79********************************7766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.70
# Mc/sec: 1472.05
//
Query:       MMETSP1325-20131115|426_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.57
# Mc/sec: 309.87
//
Query:       MMETSP1325-20131115|428_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.61
# Mc/sec: 227.85
//
Query:       MMETSP1325-20131115|427_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.033   13.8   3.5      0.043   13.5   2.5    1.1  1  PF08595.6  RXT2-like, N-terminal
        7.9    5.8   6.2         12    5.3   4.3    1.2  1  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.5   6.2e-06     0.043      65     132 ..      11      77 ..       7      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.2e-06
  PF08595.6  65 ededdeeeededeeeaeenplkkikleelLsPltspsdlithpaisrtfkskvLkkLalelieliekE 132
                ++ dde+++ded+++++  ++  + l e L Pl  + +l++  ++s   +   L+ L lel+el+e E
  MMETSP1325-20131115|427_1  11 SEPDDEDDDDEDDDDESLSLSLPLLLLE-LLPLLLLLELLELLSLSLSLSLSLLELLLLELLELLELE 77 
                4566776666666666677888888888.67**********************************998 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   4.3    0.0017        12     123     137 ..      12      26 ..       6      33 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0017
                 XXXXXXXXXXXXXXX CS
  PF03066.10 123 deeeeddeedddeee 137
                 + ++edd+++dd++e
   MMETSP1325-20131115|427_1  12 EPDDEDDDDEDDDDE 26 
                 333444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.66
# Mc/sec: 435.70
//
Query:       MMETSP1325-20131115|433_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-17   61.5   0.0    5.3e-17   61.5   0.0    1.0  1  PF01167.13 Tub family


Domain annotation for each model (and alignments):
>> PF01167.13  Tub family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.0   3.9e-21   5.3e-17      71     136 ..       2      71 ..       1      73 [] 0.89

  Alignments for each domain:
  == domain 1    score: 61.5 bits;  conditional E-value: 3.9e-21
  PF01167.13  71 gklrsnllgtkfivyDtgqnekkaklv....spkvasgrqelaavsyelnvLGtrGPrrmtvilpsieas 136
                 gklr+n++gt+f +yD+g n++         ++  +++rqel++v ye nvLG +GPrrm+v +p ++++
   MMETSP1325-20131115|433_1   2 GKLRANFVGTEFRIYDSGMNPDDVDPDdpvdANGNQNQRQELGVVLYESNVLGAKGPRRMQVGIPKVDSE 71 
                 9********************986655566677788999************************9998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.74
# Mc/sec: 236.40
//
Query:       MMETSP1325-20131115|431_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-22   77.4   4.2    8.7e-20   70.0   1.5    2.6  2  PF13414.1  TPR repeat
    4.1e-15   54.2   2.6    2.4e-05   23.7   0.4    3.5  3  PF07719.12 Tetratricopeptide repeat
    1.6e-13   49.5   4.4    1.8e-05   24.0   0.6    3.4  3  PF00515.23 Tetratricopeptide repeat
    1.5e-10   40.6   2.4    1.5e-10   40.6   1.6    2.7  2  PF01920.15 Prefoldin subunit
    8.8e-10   38.8   0.9    7.1e-06   26.4   0.0    2.8  2  PF13432.1  Tetratricopeptide repeat
    4.1e-08   32.7   1.4    0.00023   21.0   0.1    3.1  2  PF13431.1  Tetratricopeptide repeat
    1.3e-07   30.7   0.8      0.027   14.1   0.0    3.8  3  PF13181.1  Tetratricopeptide repeat
    9.9e-07   28.5   4.7    0.00087   19.0   0.2    3.0  3  PF13424.1  Tetratricopeptide repeat
    1.4e-06   28.2   0.2       0.25   11.9   0.0    3.7  3  PF13428.1  Tetratricopeptide repeat
    0.00015   21.4   0.0     0.0006   19.5   0.0    1.9  2  PF13371.1  Tetratricopeptide repeat
    0.00028   20.8   0.5    0.00057   19.8   0.4    1.6  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
     0.0017   17.9   0.8       0.25   11.1   0.0    3.4  3  PF13176.1  Tetratricopeptide repeat
     0.0049   15.9   0.2      0.041   13.0   0.1    2.4  2  PF10516.4  SHNi-TPR
     0.0056   14.3   8.2      0.008   13.8   5.7    1.3  1  PF13514.1  AAA domain
  ------ inclusion threshold ------
      0.058   12.9   1.8        0.1   12.2   0.2    2.2  2  PF10167.4  Uncharacterised conserved protein
      0.066   10.9   2.6      0.083   10.6   1.8    1.2  1  PF01496.14 V-type ATPase 116kDa subunit family
       0.11   12.1   4.7        1.4    8.5   3.4    2.4  2  PF07544.8  RNA polymerase II transcription mediator complex subunit 9
       0.14   11.4   2.5       0.28   10.5   1.7    1.4  1  PF01988.14 VIT family
       0.36   10.3   4.7       0.62    9.5   3.2    1.4  1  PF04156.9  IncA protein
        0.9    9.2   8.2        3.5    7.3   0.4    3.0  3  PF05524.8  PEP-utilising enzyme, N-terminal
       0.98    9.9   5.9         14    6.3   0.1    3.9  3  PF13174.1  Tetratricopeptide repeat
          1    9.1   6.4       0.76    9.5   0.4    2.9  2  PF04212.13 MIT (microtubule interacting and transport) domain
        8.9    6.2  15.3       0.31   10.9   5.0    2.6  3  PF02403.17 Seryl-tRNA synthetase N-terminal domain


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   1.5   1.5e-22   8.7e-20       1      69 []       7      74 ..       7      74 .. 0.97
   2 !    6.7   0.0     0.008       4.8       6      40 ..      80     114 ..      77     142 .. 0.85

  Alignments for each domain:
  == domain 1    score: 70.0 bits;  conditional E-value: 1.5e-22
  PF13414.1  1 enAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
               e+Aea k +Gn +f ++dy+ Ai +y++A+eldp+n ++y+n++l y + g ++ eAl+d+ek+++l P
  MMETSP1325-20131115|431_1  7 ELAEAKKKEGNDAFAKKDYEAAIGFYTEAIELDPQNHIYYSNRSLMYAESG-KFTEALADAEKCVKLEP 74
               579************************************************.6**************98 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.008
  PF13414.1   6 lkelGnalfkegdydeAieayekAleldpnnaely 40 
                + + +na f++ ++d Ai+  + +l+ d ++ +l 
  MMETSP1325-20131115|431_1  80 YHRVANAQFELEQLDAAIATIRTGLQKDTKSKDLT 114
                67789999*****************9998887765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.4   4.1e-08   2.4e-05       1      34 []       9      42 ..       9      42 .. 0.93
   2 !   20.5   0.0   4.5e-07   0.00027       3      33 ..      45      75 ..      43      76 .. 0.94
   3 !    8.2   0.0    0.0039       2.3       2      31 ..      78     107 ..      77     110 .. 0.89

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 4.1e-08
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  1 aealynlGlayyklgdyeeAleafekAleldPnn 34
                aea    G+ +++++dye A+ ++ +A+eldP+n
   MMETSP1325-20131115|431_1  9 AEAKKKEGNDAFAKKDYEAAIGFYTEAIELDPQN 42
                5677789*************************97 PP

  == domain 2    score: 20.5 bits;  conditional E-value: 4.5e-07
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldPn 33
                ++ n+ l y+++g++ eAl++ ek+++l+P 
   MMETSP1325-20131115|431_1 45 YYSNRSLMYAESGKFTEALADAEKCVKLEPS 75
                899**************************96 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.0039
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleld 31 
                 +++++ ++a ++l +++ A++  +  l+ d
   MMETSP1325-20131115|431_1  78 KGYHRVANAQFELEQLDAAIATIRTGLQKD 107
                 689*****************9999988876 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.6   2.9e-08   1.8e-05       2      34 .]      10      42 ..       9      42 .. 0.90
   2 !   16.4   0.0   7.4e-06    0.0044       4      34 .]      46      76 ..      44      76 .. 0.89
   3 !    8.8   0.0    0.0019       1.1       2      28 ..      78     104 ..      77     107 .. 0.84

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 2.9e-08
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALelnPnn 34
                +a +  Gn  + +++y+ A+ +y +A+el+P+n
   MMETSP1325-20131115|431_1 10 EAKKKEGNDAFAKKDYEAAIGFYTEAIELDPQN 42
                6666779999*********************98 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 7.4e-06
                HHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  4 lynlGnaylklgkydeAleyyekALelnPnn 34
                + n+ ++y + gk+ eAl++ ek+++l+P++
   MMETSP1325-20131115|431_1 46 YSNRSLMYAESGKFTEALADAEKCVKLEPSF 76
                5566679**********************86 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekAL 28 
                 k + + +na+++l+++d A++  +  L
   MMETSP1325-20131115|431_1  78 KGYHRVANAQFELEQLDAAIATIRTGL 104
                 789999**************8766665 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.7      0.82   4.8e+02      87      95 ..     108     116 ..      82     133 .. 0.45
   2 !   40.6   1.6   2.6e-13   1.5e-10       1      80 [.     147     226 ..     136     236 .. 0.95

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.82
                 HHHHHHHHH CS
  PF01920.15  87 klekeleel 95 
                 ++ k+l++l
   MMETSP1325-20131115|431_1 108 TKSKDLTNL 116
                 222222222 PP

  == domain 2    score: 40.6 bits;  conditional E-value: 2.6e-13
                 HTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTS-TT-EEEEE----EEEEEHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15   1 qelinkfqqlqqqlqklaqqikqletqlkeielvleelelldedtkvykliGdvlvkqdkeevkeeLeerketlekeikt 80 
                 qel +++q +  +l+++ ++++ + ++ k   l+l e+e++ ++t+ y+ +G+++++  k++v++ L++++e++ek+ + 
   MMETSP1325-20131115|431_1 147 QELSEQYQATGRELSEVNAKLQGAAREQKATALTLGEVEKVSDETPLYRAVGKMFMLSGKDDVTSSLNNEMEDVEKRKNX 226
                 8999************************************************************************9765 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.2e-08   7.1e-06       3      62 ..      15      74 ..      13      75 .. 0.90
   2 !   18.3   0.1     4e-06    0.0024       7      58 ..      53     104 ..      53     111 .. 0.92

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 1.2e-08
  PF13432.1  3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaP 62
               +++++++ +dy++A+  + +a++l+P++  ++ ++  ++++ g++ eA+a  ++ ++l P
  MMETSP1325-20131115|431_1 15 EGNDAFAKKDYEAAIGFYTEAIELDPQNHIYYSNRSLMYAESGKFTEALADAEKCVKLEP 74
               799**********************************************66665557766 PP

  == domain 2    score: 18.3 bits;  conditional E-value: 4e-06
  PF13432.1   7 llraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraal 58 
                + ++G++ eAla  e+ ++l+P  +  + + a a ++l +ld+A+a +r  l
  MMETSP1325-20131115|431_1  53 YAESGKFTEALADAEKCVKLEPSFVKGYHRVANAQFELEQLDAAIATIRTGL 104
                5789*****************************************9998766 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.1   3.9e-07   0.00023       1      33 [.      31      63 ..      31      64 .. 0.95
   2 !    9.5   0.0    0.0018         1       3      34 .]      67      98 ..      65      98 .. 0.95

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 3.9e-07
  PF13431.1  1 lyekaleldPnnadaynnLAelllnnGdleeAe 33
               +y +a+eldP n+  y n+ + +++ G++ eA+
  MMETSP1325-20131115|431_1 31 FYTEAIELDPQNHIYYSNRSLMYAESGKFTEAL 63
               69***************************9997 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.0018
  PF13431.1  3 ekaleldPnnadaynnLAelllnnGdleeAeq 34
               ek+++l+P  +  y++ A++ +++ +l+ A++
  MMETSP1325-20131115|431_1 67 EKCVKLEPSFVKGYHRVANAQFELEQLDAAIA 98
               8***************************9985 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00037      0.22      13      33 ..      21      42 ..      19      43 .. 0.90
   2 !   14.1   0.0   4.6e-05     0.027       4      32 ..      45      74 ..      43      76 .. 0.89
   3 ?    1.4   0.0      0.49   2.9e+02       3      24 ..      79     100 ..      77     108 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00037
               HTT-HHHHHHHHH---HHHH.. CS
  PF13181.1 13 qlGdydkAkeylekalelkp.r 33
                ++dy++A+ ++ +a+el+p +
  MMETSP1325-20131115|431_1 21 AKKDYEAAIGFYTEAIELDPqN 42
               59******************66 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 4.6e-05
               TT.T---HHHHTT-HHHHHHHHH---HHHH CS
  PF13181.1  4 yy.nlGdiYrqlGdydkAkeylekalelkp 32
               yy n+++ Y++ G++ +A++  ek+++l p
  MMETSP1325-20131115|431_1 45 YYsNRSLMYAESGKFTEALADAEKCVKLEP 74
               555*************************98 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.49
                -TTT---HHHHTT-HHHHHHHH CS
  PF13181.1   3 ayynlGdiYrqlGdydkAkeyl 24 
                 y++ + + ++l + d+A++  
  MMETSP1325-20131115|431_1  79 GYHRVANAQFELEQLDAAIATI 100
                6888899999********9865 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.4   2.2e-06    0.0013      10      76 ..       7      73 ..       4      75 .. 0.79
   2 !   19.0   0.2   1.5e-06   0.00087       4      68 ..      42      99 ..      39     105 .. 0.88
   3 ?    5.6   0.0     0.022        13       8      33 ..      80     105 ..      73     115 .. 0.81

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 2.2e-06
  PF13424.1 10 nlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
               +la++ +++g+   A + ye a+  + e+ + +p+   ++ n +  y++ g++ eAl+  ek++++ 
  MMETSP1325-20131115|431_1  7 ELAEAKKKEGNDAFAKKDYEAAIGFYTEAIELDPQNHIYYSNRSLMYAESGKFTEALADAEKCVKLE 73
               56666666666666777777777666666677888899************************99985 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 1.5e-06
  PF13424.1  4 latilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAley 68
                +++++n  l++ + g++ eAl+  ek+++l        p  ++ ++  an++ +l+++d+A++ 
  MMETSP1325-20131115|431_1 42 NHIYYSNRSLMYAESGKFTEALADAEKCVKLE-------PSFVKGYHRVANAQFELEQLDAAIAT 99
               56799**************************7.......88899999999999999999999875 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.022
  PF13424.1   8 lnnlalvlrrlgdydeAlelyekale 33 
                +++ a++ ++l+++d A++ +++ l+
  MMETSP1325-20131115|431_1  80 YHRVANAQFELEQLDAAIATIRTGLQ 105
                78889998999999999998888776 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0     0.011       6.4      12      35 ..      20      43 ..       7      49 .. 0.87
   2 ?    5.8   0.0     0.039        23       7      38 ..      49      80 ..      44      84 .. 0.82
   3 !   11.9   0.0   0.00042      0.25       3      36 ..      79     112 ..      77     119 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.011
  PF13428.1 12 lalGdpdeAiallrralalaPdda 35
               +a  d+++Ai  + +a++l+P++ 
  MMETSP1325-20131115|431_1 20 FAKKDYEAAIGFYTEAIELDPQNH 43
               56789****************985 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.039
  PF13428.1  7 larallalGdpdeAiallrralalaPddaeal 38
               +   ++++G + eA+a +++ ++l P+    +
  MMETSP1325-20131115|431_1 49 RSLMYAESGKFTEALADAEKCVKLEPSFVKGY 80
               566799******************99876655 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 0.00042
  PF13428.1   3 allalarallalGdpdeAiallrralalaPddae 36 
                 + + a+a+++l+++d+Aia  r  l+++ ++ +
  MMETSP1325-20131115|431_1  79 GYHRVANAQFELEQLDAAIATIRTGLQKDTKSKD 112
                57889**********************9987655 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0     1e-06    0.0006       6      60 ..      20      74 ..      19     101 .. 0.88
   2 ?   -0.5   0.0       1.8     1e+03      38      61 ..      86     109 ..      80     132 .. 0.73

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 1e-06
  PF13371.1  6 lreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcp 60
               +  +d+e+A+  +   ++l+P+ +  +  r l++a+ g +++A++d e +++l+p
  MMETSP1325-20131115|431_1 20 FAKKDYEAAIGFYTEAIELDPQNHIYYSNRSLMYAESGKFTEALADAEKCVKLEP 74
               6789*************************************************99 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 1.8
  PF13371.1  38 llaqlgclaaAaedLeaflelcpd 61 
                ++++l++l aA++  ++ l+++  
  MMETSP1325-20131115|431_1  86 AQFELEQLDAAIATIRTGLQKDTK 109
                567888888888877777766654 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.4   9.7e-07   0.00057       2      81 ..      22     100 ..      21     103 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 9.7e-07
                TT-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCH CS
  PF12895.2   2 qhnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavL 81 
                +++y+ A+ ++ ++++++p  +++ y+ +  l + ++g++++A+   +k  +l++s ++     A + ++l+++d Aia++
  MMETSP1325-20131115|431_1  22 KKDYEAAIGFYTEAIELDP--QNHIYYSNRSLMYAESGKFTEALADAEKcVKLEPSFVKGYHRVANAQFELEQLDAAIATI 100
                679**************99..47999999******************9987887766555555599************987 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00041      0.25      14      33 ..      24      41 ..      19      44 .. 0.85
   2 ?    0.4   0.0       1.1   6.6e+02       8      20 ..      52      64 ..      46      75 .. 0.78
   3 ?    2.2   0.0       0.3   1.8e+02       2      31 ..      80     107 ..      80     112 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00041
  PF13176.1 14 dyekAielyeraLaltkdpl 33
               dye Ai +y++  a++ dp+
  MMETSP1325-20131115|431_1 24 DYEAAIGFYTE--AIELDPQ 41
               9**********..8888876 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 1.1
  PF13176.1  8 lysrlgdyekAie 20
               +y ++g++ +A+ 
  MMETSP1325-20131115|431_1 52 MYAESGKFTEALA 64
               6999****99985 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.3
  PF13176.1   2 llnLarlysrlgdyekAielyeraLaltkd 31 
                +++ a+++++l + + Ai   +   +l kd
  MMETSP1325-20131115|431_1  80 YHRVANAQFELEQLDAAIATIRT--GLQKD 107
                57789*************98888..77766 PP

>> PF10516.4  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       1.1   6.3e+02      22      33 ..      23      34 ..      21      38 .. 0.69
   2 !   13.0   0.1   6.9e-05     0.041      13      30 ..      55      72 ..      54      73 .. 0.96

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 1.1
  PF10516.4 22 eDlrkaLeLreq 33
               +D+++a+ ++++
  MMETSP1325-20131115|431_1 23 KDYEAAIGFYTE 34
               788888776654 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 6.9e-05
  PF10516.4 13 EnEnFpqAveDlrkaLeL 30
               E+++F++A+ D +k+++L
  MMETSP1325-20131115|431_1 55 ESGKFTEALADAEKCVKL 72
               99**************98 PP

>> PF13514.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   5.7   1.4e-05     0.008     311     425 ..     105     226 ..      54     241 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.4e-05
  PF13514.1 311 eianareeaaallaqigpeleeeavesl....rpslaaketvsellkrkeaLdqalksareeleererelkqvekelaalptvtesealraalada...qrlgdidaalaaleaevaekkre 425
                +++ + +++ +ll++i+ + + ++ +      r+ ++++++v+el+++++a   +l +++ +l+ ++re+k+    l+ +++v ++++l +a+ +     +  d+   l+++ ++v++ k+ 
  MMETSP1325-20131115|431_1 105 QKDTKSKDLTNLLRKIKSKKQAAQAAMRrpkgRMDESTQKEVQELSEQYQATGRELSEVNAKLQGAAREQKATALTLGEVEKVSDETPLYRAVGKMfmlSGKDDVTSSLNNEMEDVEKRKNX 226
                34455566667777777443322222221111567899******************************************************998722244557777777777777776665 PP

>> PF10167.4  Uncharacterised conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   0.00017       0.1      60     117 ..      86     142 ..      80     145 .. 0.85
   2 ?   -1.9   0.0       3.9   2.3e+03      47      63 ..     220     236 ..     208     241 .. 0.57

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00017
  PF10167.4  60 iqgkiydleysikavksledadetfkniqelLkqaislkqqlknsesrskkkdsasss 117
                 q + ++l+ +i+++++  + d+  k++ +lL+  i++k+q  ++  r++k ++ +s+
  MMETSP1325-20131115|431_1  86 AQFELEQLDAAIATIRTGLQKDTKSKDLTNLLR-KIKSKKQAAQAAMRRPKGRMDEST 142
                5677899**********999999**********.888898888888888887776655 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 3.9
  PF10167.4  47 vekkkevkeleeeiqgk 63 
                vek+k+  ++ee+i  +
  MMETSP1325-20131115|431_1 220 VEKRKNXADVEEDIPTA 236
                55555555555555444 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.8   0.00014     0.083      24      99 ..     101     176 ..      65     239 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00014
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14  24 rkfvnevrrldeverklrkleseikkakielkdekekpdvpeskevedleeeleeleeelkeveeslesLekelne 99 
                 r+ +++  + ++++  lrk++s+ ++a++++++ k + d +++kev++l e+++ +  el+ev+++l+   +e + 
   MMETSP1325-20131115|431_1 101 RTGLQKDTKSKDLTNLLRKIKSKKQAAQAAMRRPKGRMDESTQKEVQELSEQYQATGRELSEVNAKLQGAAREQKA 176
                 4555666667777778888888888888888888888888888899999999998888888888877655444433 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.097        58      10      39 ..      78     106 ..      58     108 .. 0.83
   2 ?    8.5   3.4    0.0024       1.4      15      70 ..     100     155 ..      90     168 .. 0.74

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.097
  PF07544.8  10 dllkeiekdpnldskdletatsslkhrlqk 39 
                +  + +++ ++++ ++l+ a+  +++ lqk
  MMETSP1325-20131115|431_1  78 KGYHRVAN-AQFELEQLDAAIATIRTGLQK 106
                55677778.899*************99997 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0024
  PF07544.8  15 iekd..pnldskdletatsslkhrlqkaraaveelpd.isrsveeqeaeIeeleeqiar 70 
                i++   ++  skdl + + ++k + q a+aa++   + +++s   +++e++el eq ++
  MMETSP1325-20131115|431_1 100 IRTGlqKDTKSKDLTNLLRKIKSKKQAAQAAMRRPKGrMDES---TQKEVQELSEQYQA 155
                3333336799************************88888876...57777777777665 PP

>> PF01988.14  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.7   0.00047      0.28      57     135 ..     121     196 ..     118     203 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00047
  PF01988.14  57 kaerdleeaelereqqeverspegeveeladilkakglseetaaqvaeeltakedaldfllkeelgleeestsrplkaa 135
                 k+ ++  +a ++r + ++++s ++ev+el++ ++a g + ++++   +  +++++a+++ l e +++++e   +pl  a
   MMETSP1325-20131115|431_1 121 KSKKQAAQAAMRRPKGRMDESTQKEVQELSEQYQATGRELSEVNAKLQGAAREQKATALTLGEVEKVSDE---TPLYRA 196
                 6888899999*************************99999999999998888777799999999998876...565555 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.2     0.001      0.62      86     182 ..      86     168 ..      55     190 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.001
  PF04156.9  86 sesqlseleeeleq......leerlaeleseledleedlellq........eelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqekla 182
                ++++l +l+  + +       ++++++l+  l+++++ ++ +q         + +s ++++++l+e+++++ +e++e+                              kl+
  MMETSP1325-20131115|431_1  86 AQFELEQLDAAIATirtglqKDTKSKDLTNLLRKIKSKKQAAQaamrrpkgRMDESTQKEVQELSEQYQATGRELSEVN----------------------------AKLQ 168
                4444444443333311121145666677777777777777777888888877888888888888888888888888888............................2222 PP

>> PF05524.8  PEP-utilising enzyme, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.4    0.0058       3.5      28      56 ..      81     109 ..      62     131 .. 0.75
   2 ?    2.8   2.6      0.14        84      25      68 ..     134     178 ..     122     222 .. 0.83
   3 ?   -2.3   0.0       5.3   3.2e+03      11      35 ..     196     222 ..     194     231 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0058
  PF05524.8  28 reasdveaEierleaAlekareeleelae 56 
                +++++++ E+e+l+aA+++ r+ l++  +
  MMETSP1325-20131115|431_1  81 HRVANAQFELEQLDAAIATIRTGLQKDTK 109
                4557999*****************64333 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.14
  PF05524.8  25 vperea.sdveaEierleaAlekareeleelaeqlseelgaeea.a 68 
                ++ r   +++++E++ l +  +++ +el+e+ ++l+ ++ +++a a
  MMETSP1325-20131115|431_1 134 PKGR-MdESTQKEVQELSEQYQATGRELSEVNAKLQGAAREQKAtA 178
                3333.258999***********************999998887745 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 5.3
  PF05524.8  11 aiGkavlleeee.aevperea.sdvea 35 
                a+Gk+++l+ ++ ++ + ++  +dve+
  MMETSP1325-20131115|431_1 196 AVGKMFMLSGKDdVTSSLNNEmEDVEK 222
                788888888666433333333455554 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1     0.023        14      13      32 ..      16      41 ..       6      42 .. 0.74
   2 ?    1.4   0.0      0.81   4.8e+02      10      31 ..      53      74 ..      46      75 .. 0.79
   3 ?    2.6   0.0      0.34     2e+02       3      22 ..      80      99 ..      78     102 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.023
               H......HHHHHHHHHHHHHHHH-TT CS
  PF13174.1 13 l......gdtdeAlealerlikeyPd 32
               +      +d+++A+  + + i+  P+
  MMETSP1325-20131115|431_1 16 GndafakKDYEAAIGFYTEAIELDPQ 41
               35555557*************99996 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.81
               HHHHHHHHHHHHHHHHHHHH-T CS
  PF13174.1 10 yyklgdtdeAlealerlikeyP 31
               y + g+++eAl+  e+++k  P
  MMETSP1325-20131115|431_1 53 YAESGKFTEALADAEKCVKLEP 74
               45567*********99999766 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.34
               HHHHHHHHHHHHHHHHHHHH CS
  PF13174.1  3 lyklalsyyklgdtdeAlea 22
               + + a ++++l + d+A+++
  MMETSP1325-20131115|431_1 80 YHRVANAQFELEQLDAAIAT 99
               568899****88*****997 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.4    0.0013      0.76      18      34 ..      22      38 ..       6      38 .. 0.81
   2 ?    1.7   0.1      0.35   2.1e+02       2      19 ..      93     110 ..      92     132 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0013
                TT-HHHHHHHHHHHHHH CS
  PF04212.13 18 agkyeeAlelYkeAlel 34
                +++ye+A+  Y+eA+el
   MMETSP1325-20131115|431_1 22 KKDYEAAIGFYTEAIEL 38
                78*************95 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.35
                 HHHHHHHHHHHHHHHHTT CS
  PF04212.13   2 lskAlelikkAveaDeag 19 
                 l++A+  i++++++D + 
   MMETSP1325-20131115|431_1  93 LDAAIATIRTGLQKDTKS 110
                 688999999999999876 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.9      0.12        70      32      88 ..      77     129 ..      56     139 .. 0.59
   2 ?   10.9   5.0   0.00051      0.31      27     100 ..      99     170 ..      90     184 .. 0.81
   3 ?   -0.9   0.0       2.5   1.5e+03      71      85 ..     212     226 ..     202     238 .. 0.53

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHH CS
  PF02403.17  32 leldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkalea 88 
                 ++ + ++ ++q+ele+l a   ++   ++k  k+k d ++l++++k+ k   +a++a
   MMETSP1325-20131115|431_1  77 VKGYHRVANAQFELEQLDAAIATIRTGLQKDTKSK-DLTNLLRKIKSKK---QAAQA 129
                 45555566677777777777766666666666655.5454554444433...33333 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00051
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  27 dvdelleldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelekl 100
                 ++ + l+ d++ + l + l ++++++ ++++++ + k +    e+  +ev+el+e+ +a   el+e++a+l+ +
   MMETSP1325-20131115|431_1  99 TIRTGLQKDTKSKDLTNLLRKIKSKKQAAQAAMRRPKGRM--DESTQKEVQELSEQYQATGRELSEVNAKLQGA 170
                 566668999**********************999999765..56777888888888888888888888888754 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 2.5
                 CHHHHHHHHHHHHHH CS
  PF02403.17  71 eliaevkelkeelka 85 
                 +l +e++++ ++ + 
   MMETSP1325-20131115|431_1 212 SLNNEMEDVEKRKNX 226
                 333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1464  (0.10708); expected 273.4 (0.02)
Passed bias filter:                      770  (0.0563195); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.76u 0.47s 00:00:01.23 Elapsed: 00:00:00.92
# Mc/sec: 677.23
//
Query:       MMETSP1325-20131115|437_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.42s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 235.83
//
Query:       MMETSP1325-20131115|438_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.60
# Mc/sec: 207.68
//
Query:       MMETSP1325-20131115|435_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-15   53.7   1.4    8.6e-06   25.0   0.0    3.6  4  PF01344.20 Kelch motif
    6.6e-11   41.9   1.1     0.0045   16.9   0.0    3.6  3  PF13415.1  Galactose oxidase, central domain
    1.6e-08   34.2   0.4      0.071   13.2   0.0    3.5  3  PF13964.1  Kelch motif
    5.9e-08   32.3   1.2    0.00046   20.0   0.0    3.6  4  PF07646.10 Kelch motif
    1.2e-06   28.0   1.1     0.0064   16.1   0.0    4.0  4  PF13418.1  Galactose oxidase, central domain
    0.00028   20.6   0.9      0.009   15.8   0.0    3.0  3  PF13854.1  Kelch motif


Domain annotation for each model (and alignments):
>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.3e-06    0.0098      26      47 .]       2      23 ..       1      23 [. 0.89
   2 !   25.0   0.0   3.8e-09   8.6e-06       5      42 ..      29      64 ..      28      64 .. 0.96
   3 !   10.5   0.0   0.00013      0.29       7      46 ..      82     120 ..      74     121 .. 0.87
   4 ?   -3.5   0.3         3   6.8e+03       1       9 [.     123     131 ..     123     132 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 4.3e-06
                -TTEEEEEETTTTEEEEECCSS CS
  PF01344.20 26 alnsVerYDpvtntWeklpsmp 47
                + +++erYDp  + We ++ +p
   MMETSP1325-20131115|435_1  2 PIDTCERYDPARDRWEMVARLP 23
                679**************99775 PP

  == domain 2    score: 25.0 bits;  conditional E-value: 3.8e-09
                EEEEEETTEEEEE---BSTTS-TTEEEEEETTTTEEEE CS
  PF01344.20  5 agvvvldgkiYviGGrdgdtnalnsVerYDpvtntWek 42
                ag +v+++k++v GG+++   +++s++ YD  t+ W++
   MMETSP1325-20131115|435_1 29 AGSAVVGDKLFVLGGFSP--LFSDSIFEYDASTDHWRR 64
                699**************8..****************96 PP

  == domain 3    score: 10.5 bits;  conditional E-value: 0.00013
                 EEEETTEEEEE---BSTTS-TTEEEEEETTTTEEEEECCS CS
  PF01344.20   7 vvvldgkiYviGGrdgdtnalnsVerYDpvtntWeklpsm 46 
                  v   +ki+ + G+++  n+  +  ++D+++ +We ++ +
   MMETSP1325-20131115|435_1  82 GVPSQDKIFTVAGHCN-ANIDGKAAIWDLTSRQWENASAL 120
                 466789**********.******************98766 PP

  == domain 4    score: -3.5 bits;  conditional E-value: 3
                 SSSCEEEEE CS
  PF01344.20   1 arssagvvv 9  
                 +r+++++v+
   MMETSP1325-20131115|435_1 123 RRAGHACVA 131
                 699***997 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0027       6.1      20      41 ..       5      26 ..       2      34 .. 0.83
   2 !   16.9   0.0     2e-06    0.0045       1      47 [.      35      81 ..      35      83 .. 0.93
   3 !   14.8   0.0   9.6e-06     0.022      23      48 ..     106     131 ..      87     132 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0027
  PF13415.1 20 dvyvldldtntweeigslPppR 41
               ++ ++d++++ we +++lP + 
  MMETSP1325-20131115|435_1  5 TCERYDPARDRWEMVARLPRAV 26
               6789***************876 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 2e-06
  PF13415.1  1 gdelyvfGGlgddgqtrlndvyvldldtntweei..gslPp.pRaghtat 47
               gd+l+v GG+      ++ + +++d +t+ w+++  g lP+ pR++++++
  MMETSP1325-20131115|435_1 35 GDKLFVLGGFS---PLFSDSIFEYDASTDHWRRSfkGKLPGgPRHSFGCV 81
               799********...7889999******************999****9987 PP

  == domain 3    score: 14.8 bits;  conditional E-value: 9.6e-06
  PF13415.1  23 vldldtntweeigslPppRaghtata 48 
                ++dl++++we  + lP  Ragh+++a
  MMETSP1325-20131115|435_1 106 IWDLTSRQWENASALPYRRAGHACVA 131
                78**********************97 PP

>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   3.1e-05     0.071      27      48 ..       3      24 ..       1      26 [. 0.87
   2 !   10.7   0.0   0.00018      0.42       6      41 ..      30      63 ..      28      71 .. 0.86
   3 !    6.6   0.0    0.0036       8.2       2      50 .]      75     124 ..      74     124 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.1e-05
  PF13964.1 27 lndvlvydpetksWeqlpplpv 48
                ++ ++ydp  ++We++++lp 
  MMETSP1325-20131115|435_1  3 IDTCERYDPARDRWEMVARLPR 24
               56889***************96 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00018
  PF13964.1  6 savsvggkiyifGGytnsgkylndvlvydpetksWe 41
                +++vg+k++++GG++    ++++++ yd +t+ W+
  MMETSP1325-20131115|435_1 30 GSAVVGDKLFVLGGFSPL--FSDSIFEYDASTDHWR 63
               57899**********984..8888888999999886 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0036
  PF13964.1   2 raghsa..vsvggkiyifGGytnsgkylndvlvydpetksWeqlpplpvpr 50 
                r+ + +  v  ++ki+ + G +n+ +   +  ++d+ ++ We  + lp++r
  MMETSP1325-20131115|435_1  75 RHSFGCvgVPSQDKIFTVAGHCNA-NIDGKAAIWDLTSRQWENASALPYRR 124
                676666234467899999999995.6678889***********99999987 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.4   3.1e+03      35      48 ..       9      22 ..       7      23 .. 0.82
   2 !   20.0   0.0     2e-07   0.00046       7      44 ..      31      64 ..      27      65 .. 0.94
   3 !    8.6   0.0   0.00082       1.9       5      49 .]      76     121 ..      74     121 .. 0.82
   4 ?   -1.0   0.0      0.87     2e+03       1       9 [.     123     131 ..     123     133 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.4
  PF07646.10 35 ldpeknvWeeltpl 48
                +dp   +We + +l
   MMETSP1325-20131115|435_1  9 YDPARDRWEMVARL 22
                8999****988776 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 2e-07
  PF07646.10  7 avvpggkiyvvGGahtdngllsssdlnvldpeknvWee 44
                ++v+g+k++v GG+     +l+s+++  +d ++ +W++
   MMETSP1325-20131115|435_1 31 SAVVGDKLFVLGGF----SPLFSDSIFEYDASTDHWRR 64
                789***********....******************86 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.00082
  PF07646.10   5 hsavvp....ggkiyvvGGahtdngllsssdlnvldpeknvWeeltplg 49 
                 hs+ ++    ++ki+ v G+    ++   ++  ++d+ +++We+ ++l+
   MMETSP1325-20131115|435_1  76 HSFGCVgvpsQDKIFTVAGH---CNANIDGKAAIWDLTSRQWENASALP 121
                 5555555578**********...9999999999**********988775 PP

  == domain 4    score: -1.0 bits;  conditional E-value: 0.87
  PF07646.10   1 pryghsavv 9  
                 +r+gh++v 
   MMETSP1325-20131115|435_1 123 RRAGHACVA 131
                 79*****96 PP

>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.013        30      30      48 ..       5      23 ..       2      24 .. 0.87
   2 !   16.1   0.0   2.8e-06    0.0064       9      48 ..      32      71 ..      28      72 .. 0.83
   3 ?    3.3   0.0     0.028        64      30      48 ..     103     121 ..      77     122 .. 0.85
   4 ?   -1.3   0.0      0.73   1.7e+03       2       9 ..     124     131 ..     123     139 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.013
  PF13418.1 30 DlyvfDlstntWtrlpslP 48
                + ++D++  +W+ ++ lP
  MMETSP1325-20131115|435_1  5 TCERYDPARDRWEMVARLP 23
               4579************999 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 2.8e-06
  PF13418.1  9 avpdgrlylfGGenedggplnDlyvfDlstntWtrl..pslP 48
               av +++l++ GG ++   +++ ++ +D st +W+r   + lP
  MMETSP1325-20131115|435_1 32 AVVGDKLFVLGGFSPL--FSDSIFEYDASTDHWRRSfkGKLP 71
               33357**********9..9***************98666555 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.028
  PF13418.1  30 DlyvfDlstntWtrlpslP 48 
                 + ++Dl++++W+  ++lP
  MMETSP1325-20131115|435_1 103 KAAIWDLTSRQWENASALP 121
                5789********9887777 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 0.73
  PF13418.1   2 Raghsava 9  
                Ragh++va
  MMETSP1325-20131115|435_1 124 RAGHACVA 131
                9*****97 PP

>> PF13854.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   3.9e-06     0.009       1      38 [.      22      56 ..      22      60 .. 0.90
   2 ?    1.2   0.0      0.15   3.3e+02       3      18 ..      73      90 ..      70      94 .. 0.78
   3 ?   -0.0   0.1      0.36   8.3e+02       1      12 [.     120     131 ..     120     136 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3.9e-06
  PF13854.1  1 lPppRarhcavvvsgniylyGGksgnddsvsddvyvLs 38
               lP +  ++ ++vv++++++ GG+s   + +sd ++ ++
  MMETSP1325-20131115|435_1 22 LPRAVEQAGSAVVGDKLFVLGGFS---PLFSDSIFEYD 56
               6999********************...89999998887 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.15
  PF13854.1  3 ppRarhcavvvs..gniy 18
                pR+++  v+v   ++i+
  MMETSP1325-20131115|435_1 73 GPRHSFGCVGVPsqDKIF 90
               69*********5336786 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 0.36
  PF13854.1   1 lPppRarhcavv 12 
                lP  Ra+h+ v+
  MMETSP1325-20131115|435_1 120 LPYRRAGHACVA 131
                699999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.31s 00:00:00.87 Elapsed: 00:00:00.63
# Mc/sec: 1152.53
//
Query:       MMETSP1325-20131115|439_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-07   30.7   0.8    2.6e-07   30.1   0.5    1.3  1  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.5   1.9e-11   2.6e-07       2      39 .]      26      62 ..      25      62 .. 0.94

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 1.9e-11
                EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  2 eckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                + ++  +gHt+ V+c+a+s +  ++++gS+D+ti  Wd
   MMETSP1325-20131115|439_1 26 KEVKRVEGHTDVVSCLAVSES-GMVCTGSWDSTIATWD 62
                6788899**************.************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 434.89
//
Query:       MMETSP1325-20131115|430_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.72
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|436_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.71
# Mc/sec: 675.03
//
Query:       MMETSP1325-20131115|444_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 213.83
//
Query:       MMETSP1325-20131115|446_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   13.2   0.1      0.079   12.6   0.1    1.3  1  PF12840.2 Helix-turn-helix domain
      0.065   11.8   0.1      0.076   11.6   0.0    1.0  1  PF05633.6 Protein of unknown function (DUF793)


Domain annotation for each model (and alignments):
>> PF12840.2  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.2e-05     0.079      24      53 ..       8      42 ..       5      51 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.2e-05
               ---HHHHHHHHT....--HHHHHHHHHHH.H.--- CS
  PF12840.2 24 gltaselaerld....lpqstlsyHLrvLee.aGL 53
               g+ +++la++ld    ++++ +s++ ++L + a  
  MMETSP1325-20131115|446_1  8 GMAVEPLAKALDrakeITKQHMSRQAKKLLDeAKV 42
               8999*******66777*************997766 PP

>> PF05633.6  Protein of unknown function (DUF793)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.1e-05     0.076     294     348 ..      17      71 ..      10      90 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.1e-05
  PF05633.6 294 lhdrileeskkkekkkscGLlkeiqrieklsrslmeladsvefpleedkevevke 348
                  dr  e +k++  +++  Ll e + + k+ rsl++l+ds  +   +d+  ++k+
  MMETSP1325-20131115|446_1  17 ALDRAKEITKQHMSRQAKKLLDEAKVLLKIRRSLQDLVDSGSHGGRDDDGASAKR 71 
                5688888999999999*****************************9998777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.64
# Mc/sec: 411.87
//
Query:       MMETSP1325-20131115|448_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.63
# Mc/sec: 654.24
//
Query:       MMETSP1325-20131115|447_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-42  141.7   0.8    1.8e-41  140.8   0.5    1.4  1  PF03947.13 Ribosomal Proteins L2, C-terminal domain
    5.4e-15   55.0   0.4    1.4e-14   53.7   0.3    1.7  1  PF00181.18 Ribosomal Proteins L2, RNA binding domain


Domain annotation for each model (and alignments):
>> PF03947.13  Ribosomal Proteins L2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.8   0.5   2.7e-45   1.8e-41       2     125 ..     106     235 ..     105     240 .. 0.95

  Alignments for each domain:
  == domain 1    score: 140.8 bits;  conditional E-value: 2.7e-45
                 ----BEEGGGS----EBBSB-S-------SS------BEB----S..SEEEEE-----EEEEETTSEEB-------STTS--------GGG---.....-S------S-TTT--------------.--SS CS
  PF03947.13   2 kiGnalpLkniplGtvvhnielkpgkggklarsaGtvaqilakee..kyvlvkLpSgevklvskecrAtiGevsneekknkklgkAgrsrwlgk.....rptvRGvamnpvDhPhGGGegktsigrkspvs 125
                 +iGn+lpL  +p+Gtv++n+e   g++gk+a+ +G +a +++++e    + ++LpSg +k +s++crA +G+v++ ++++k++ kAgr++++++     +p+vRGvamnpv+hPhGGG+ +++ig++s++ 
   MMETSP1325-20131115|447_1 106 TIGNVLPLYAMPEGTVICNVEAYVGDRGKIAKCSGDYAVVVTHDEdkGTTRIRLPSGSKKTLSNQCRAAVGIVAGGGRTDKPMLKAGRAYHKYRvkrneWPKVRGVAMNPVEHPHGGGN-HQHIGHPSTTR 235
                 68*****************************************99766899******************************************9999**********************.******66554 PP

>> PF00181.18  Ribosomal Proteins L2, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.3     2e-18   1.4e-14       1      77 []      20      99 ..      20      99 .. 0.94

  Alignments for each domain:
  == domain 1    score: 53.7 bits;  conditional E-value: 2e-18
  PF00181.18  1 GRnnkGritvrhrggghkrkyrlidfkrkkenikgkVvkieydpnRsapialvkyedgekr.....yilapeglkvGdtivs 77
                G++  +r+++r  +g  k++ r+ d+ +k + +kg+V++i++ ++R ap+a+v++++ +++     +++a+eg+  G++i++
   MMETSP1325-20131115|447_1 20 GKGGIFRSHTRLNKG--KVQLRKWDYSEKRGFVKGVVKEIMHESGRGAPLAKVQFQNSYYYkkdteLFIAVEGMYNGQFIYC 99
                88899**********..****************************************555566899**************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.83
# Mc/sec: 759.33
//
Query:       MMETSP1325-20131115|441_1  [L=513]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-20   70.0  10.8    7.5e-20   70.0   7.5    2.9  3  PF09280.6  XPC-binding domain
    2.2e-18   65.1   0.1    3.7e-18   64.4   0.0    1.4  1  PF00240.18 Ubiquitin family
      5e-12   45.1   2.5    2.9e-06   26.8   0.5    3.1  2  PF00627.26 UBA/TS-N domain
    1.2e-09   37.5   0.2    3.2e-09   36.2   0.1    1.7  2  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
     0.0019   18.2   0.3        1.2    9.2   0.0    2.8  2  PF07499.8  RuvA, C-terminal domain
  ------ inclusion threshold ------
      0.016   15.2   0.0      0.033   14.2   0.0    1.5  1  PF10302.4  DUF2407 ubiquitin-like domain
      0.033   13.8   0.0      0.059   13.0   0.0    1.4  1  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> PF09280.6  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   7.5   3.9e-23   7.5e-20       1      56 [.     230     285 ..     230     288 .. 0.97
   2 ?   -2.8   0.1       2.1     4e+03      11      20 ..     319     328 ..     315     331 .. 0.49
   3 ?    2.1   2.3     0.062   1.2e+02       7      30 ..     344     368 ..     339     371 .. 0.73

  Alignments for each domain:
  == domain 1    score: 70.0 bits;  conditional E-value: 3.9e-23
  PF09280.6   1 LefLrdqpqfqqlrqvvqqnPelLqplLqqLgqsnPqllqlIqqnqeeFlrlLneg 56 
                L+ Lr++pq+++lrq+vq nP++L+p+Lqq+g++ P llq+I+ nq+eFl++Lne+
  MMETSP1325-20131115|441_1 230 LAELRNHPQLNALRQLVQTNPAALEPVLQQIGAQSPGLLQQIRANQQEFLAMLNEP 285
                789***************************************************98 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 2.1
  PF09280.6  11 qqlrqvvqqn 20 
                qql q+ q+ 
  MMETSP1325-20131115|441_1 319 QQLFQMFQSM 328
                3444444443 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.062
  PF09280.6   7 qpqfqqlrqvvqq.nPelLqplLqq 30 
                  q+qq+ q+ +q  Pe   +++q 
  MMETSP1325-20131115|441_1 344 PAQMQQMTQLMSQmSPEQFAQVMQM 368
                4688888887755368888888876 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.0   1.9e-21   3.7e-18       1      68 [.       6      75 ..       6      76 .. 0.97

  Alignments for each domain:
  == domain 1    score: 64.4 bits;  conditional E-value: 1.9e-21
                EESSSEEEEEEECTTSBHHHHHHHHHHHHT.S-GGGEEEEE---BETTTSBTTTTTT-TTE.EEEEEESS CS
  PF00240.18  1 ktlsgktitlevepsdtvselKekieekeg.ipvdqqrLiysGkvLeDdrtlseyniqdgs.tlhlvlrl 68
                ktl+gk +++eve s t++++K++ie     +p+ qq+Li++GkvL+Dd+ l++ +i++++  +++v+++
   MMETSP1325-20131115|441_1  6 KTLTGKNFPIEVETSLTIAQVKAHIETTNSaFPAAQQKLIHAGKVLKDDSVLGDSGIKEEDfLVVMVSKP 75
                89***********************************************************999999887 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0     2e-06    0.0039       1      26 [.     143     168 ..     143     182 .. 0.80
   2 !   26.8   0.5   1.5e-09   2.9e-06       3      37 .]     402     436 ..     400     436 .. 0.94

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2e-06
                 CTHHHHHHHHH----HHHHHHHHHHT CS
  PF00627.26   1 ideeaiqqLreMGfsreeakkALrat 26 
                 i++e+++ L  MGf+++ea+ AL+a+
   MMETSP1325-20131115|441_1 143 ITAEQLAPLTGMGFPESEARAALEAA 168
                 57899999****************97 PP

  == domain 2    score: 26.8 bits;  conditional E-value: 1.5e-09
                 HHHHHHHHH----HHHHHHHHHHTTTSHHHHHHHH CS
  PF00627.26   3 eeaiqqLreMGfsreeakkALratnnnvErAveyL 37 
                  +a+ +L ++Gfs +ea++A+ a++ n+  A++ L
   MMETSP1325-20131115|441_1 402 MAAVTRLTDLGFSQQEAVQAYMACDKNEAHAANLL 436
                 689*****************************987 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.1   1.6e-12   3.2e-09       1      72 []       1      72 [.       1      72 [. 0.97
   2 ?   -2.5   0.0         2   3.8e+03      37      48 ..     429     439 ..     416     439 .. 0.69

  Alignments for each domain:
  == domain 1    score: 36.2 bits;  conditional E-value: 1.6e-12
               EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE- CS
  PF11976.3  1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvvi 72
               +k+++k+ +gk++ i+V+ + t+++++++  + ++  +  q++Li  G+ L+++++++d +i+++d++ v++
  MMETSP1325-20131115|441_1  1 MKLTVKTLTGKNFPIEVETSLTIAQVKAHIETTNSAFPAAQQKLIHAGKVLKDDSVLGDSGIKEEDFLVVMV 72
               79***********************************99****************************98885 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2
                ---TT-EEE--- CS
  PF11976.3  37 peeeqvrLiFDG 48 
                 +   ++L+FDG
  MMETSP1325-20131115|441_1 429 EA-HAANLLFDG 439
                44.6789****9 PP

>> PF07499.8  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00061       1.2      11      35 ..     152     177 ..     143     182 .. 0.82
   2 !    6.0   0.0    0.0062        12      10      26 ..     408     424 ..     408     436 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00061
  PF07499.8  11 laLGYkekeAekAvakvle.dpgasv 35 
                 + G++e+eA+ A++++++ + ga++
  MMETSP1325-20131115|441_1 152 TGMGFPESEARAALEAAMRvGGGADL 177
                566***************99777763 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0062
  PF07499.8  10 LlaLGYkekeAekAvak 26 
                L  LG++++eA +A  +
  MMETSP1325-20131115|441_1 408 LTDLGFSQQEAVQAYMA 424
                567*********99655 PP

>> PF10302.4  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.7e-05     0.033      15      68 ..      14      64 ..       4     116 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.7e-05
  PF10302.4 15 rldinspnsltvaeLkrliRerlpgdlsrrrLrlIyaGkvLndesalasdlkee 68
               +++++  +slt+a+ k +i +   +     + +lI+aGkvL+d s l ++  +e
  MMETSP1325-20131115|441_1 14 PIEVE--TSLTIAQVKAHIETTN-SAFPAAQQKLIHAGKVLKDDSVLGDSGIKE 64
               55555..99**********9998.77888889***********99998765444 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     3e-05     0.059      11      76 ..       9      67 ..       1      92 [. 0.77

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3e-05
               ---EE-EEEE-TT-BHHHHHHHHHHHS-TT------SGGGEEEE----B--TTSBGGGGS--TTS- CS
  PF13881.1 11 dGkDigpfkfseattvaelkekvlaeWpkekeskpksandlklilaGkiLednktLkelrlplgev 76
                Gk   p +++ + t+a++k+++      e ++ +  a++ kli+aGk+L+d+  L++++++ +++
  MMETSP1325-20131115|441_1  9 TGK-NFPIEVETSLTIAQVKAHI------ETTNSAFPAAQQKLIHAGKVLKDDSVLGDSGIKEEDF 67
               577.6788888899999999988......677777888899*****************99998888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       713  (0.0521504); expected 273.4 (0.02)
Passed bias filter:                      454  (0.0332066); expected 273.4 (0.02)
Passed Vit filter:                        76  (0.00555881); expected 13.7 (0.001)
Passed Fwd filter:                        29  (0.00212112); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.29u 0.39s 00:00:01.68 Elapsed: 00:00:01.14
# Mc/sec: 1068.98
//
Query:       MMETSP1325-20131115|445_1  [L=574]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-42  143.2   0.0    4.3e-41  140.6   0.0    1.9  1  PF01026.16 TatD related DNase


Domain annotation for each model (and alignments):
>> PF01026.16  TatD related DNase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.6   0.0   3.2e-45   4.3e-41      55     255 .]       1     284 [.       1     284 [. 0.90

  Alignments for each domain:
  == domain 1    score: 140.6 bits;  conditional E-value: 3.2e-45
                 EEEE-------GGG-.-HHHHHHHHHH.HHH--SSEEEE-EE-EE-..------HHHHHHHHHHHHHHHHHTT--EEEEEES..-HHHHHHHHHHH--TT.....---B------HHHHHHHHH----B-----TT-TT.T-SHHHHH.HHS-GGGB-----TTSS--.......................................................................-----.----GGGHHHHHHHHHHH-SS-HHHHHHHHHHHHHHHH- CS
  PF01026.16  55 vyavvGiHPnevdea.neelleeleel.anvkhskvvaiGEiGLDy.ysreestkeaqeevFeeqlelAkelklplviHtre..aeedlleilkeaaeaka....kvvlHcfsgseeeakelldlgyyislsglltfkn.akklrelv.kavpldrlLiETDaPyltp.......................................................................kpyrg.krnepanvayvveklaelkgltleevaaitaeNakrlfg 255
                 vy+++G+HP+ + ++ +    +++e+l   ++++ +vaiGE+GLD+  +++++t +aq e F +q+ lA el +pl+iH r   a+e+++eil+ +  ++      +v+Hcf+g   +a++l+++g+yi+++g+ ++++ +++lre v  ++pld++++ETDaP+l+p                                                                       +  +g  r+ep +++yv++++a+++g t+++va++t++ a+++fg
   MMETSP1325-20131115|445_1   1 VYYTAGMHPHAAGSWsSSGKWQTIEQLrVLASDPLCVAIGECGLDLvEYQDQETIDAQLECFHAQVVLACELFKPLFIHMRGhgAFERVVEILSPFLVKGSrrlpLAVVHCFTGGQAQATQLIEMGLYIGMTGIACMDErGRQLREDVlPNIPLDKIMLETDAPFLKPpqppqvrprprpqprprppqvsltdgtptqapttgeqdsyesgdgdgdsdseiesdsdddgyesvdghdgsDGGEGgGRCEPSHLTYVCRTVAQAQGCTFAHVARVTTSTARAFFG 284
                 79************84555559999998889***************6589999*****************************************9986666788999****************************99998888877666*********************************************999999999999999999998888888888887666666555555444466*************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       512  (0.0374488); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.95u 0.33s 00:00:01.28 Elapsed: 00:00:00.75
# Mc/sec: 1834.01
//
Query:       MMETSP1325-20131115|453_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       542  (0.0396431); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 679.69
//
Query:       MMETSP1325-20131115|452_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.71
# Mc/sec: 1022.67
//
Query:       MMETSP1325-20131115|454_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.098   11.7   0.0       0.16   11.0   0.0    1.3  1  PF02577.9 Bifunctional nuclease


Domain annotation for each model (and alignments):
>> PF02577.9  Bifunctional nuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.2e-05      0.16      89     130 ..      22      64 ..      12      69 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.2e-05
  PF02577.9  89 eegeeeieiDaR.pSDaialAlrtgapIyvseevleeasievd 130
                ++ ++  e+DaR   Da+a+A++++   +++e +l++ + +++
  MMETSP1325-20131115|454_1  22 NDHDHDLELDARrHGDAVAVAMKMSGGGVMTEAILAHSAGKRQ 64 
                5667889****7368************9******997666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.64
# Mc/sec: 685.21
//
Query:       MMETSP1325-20131115|450_1  [L=520]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-12   45.3   0.0    9.4e-12   44.5   0.0    1.4  1  PF00782.15 Dual specificity phosphatase, catalytic domain
    8.4e-05   21.9   0.0    0.00067   19.0   0.0    2.2  1  PF00149.23 Calcineurin-like phosphoesterase
    0.00034   20.3   0.0    0.00054   19.7   0.0    1.3  1  PF12850.2  Calcineurin-like phosphoesterase superfamily domain
     0.0035   16.5   0.0     0.0058   15.8   0.0    1.2  1  PF00102.22 Protein-tyrosine phosphatase
  ------ inclusion threshold ------
      0.021   14.2   0.0        6.9    6.0   0.0    2.3  2  PF02776.13 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   3.4e-15   9.4e-12      17     127 ..      76     189 ..      63     195 .. 0.81

  Alignments for each domain:
  == domain 1    score: 44.5 bits;  conditional E-value: 3.4e-15
                 ----EEEETTSSSSEE..ECCTT---EEEE-----.STT--CGGGHHHHHHHHHHHCC--..--EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-STTHHHH CS
  PF00782.15  17 lgitlvinvtkevpkn..nadkkseieylripved.etetkiskeleeavefiekaeqkg..kkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnagflrqL 127
                   it++in+  + +++  +    ++ + l++ +ed  +++ + + l ++ +f+++a+q+      +VHC+ G++R +++++a l+ ++++++ eA++++++ r++i+p+  +++++
   MMETSP1325-20131115|450_1  76 RRITHIINCVPSDEEPtiQNLFAPDGRILKLGLEDdGDDQFMREMLLKVEAFVRAARQQDpdSLMYVHCMSGVNRAPSVAAAILIAEESCTALEALSAIRDIRPAIRPK--YVKEV 189
                 679*******99988888334567778888886662556666778899******997775226799*****************************************98..65555 PP

>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   2.4e-07   0.00067      25      92 ..     316     384 ..     301     493 .. 0.64

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 2.4e-07
                 HHHHHTTTSEEEEE-TTSSGHHCHHHHHHHHH.HCCHHHHTTSCEEEE---TTTHHHHHHHHHSTTHHH CS
  PF00149.23  25 eiaaeekpdlvlflGDlvdrgdwssetlalld.ylvlklllpipvfllrGNHEsdpgnsaygflkeqak 92 
                 ++ + +++d+++++GD++ rg + +    + +  ++l+    ++v++++GNHE ++++ a+  +++   
   MMETSP1325-20131115|450_1 316 MKYELPQADILVHAGDFTCRGTRDECSAFQSWmESLLEAGTVKHVVVIAGNHELSFHDPASRSKHTAVI 384
                 5667789***************87655555426666666677899**********99998877777654 PP

>> PF12850.2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0     2e-07   0.00054       2      93 ..     302     465 ..     301     488 .. 0.55

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 2e-07
  PF12850.2   2 kiaiiSDlHgnldaleavledikevdlilhaGDlvep.........eevvelledi....pvlavrGnhD............eaelpkelavel...........................................................llaaaaleiegdrvllvhgtpls 93 
                +++++SD+H+  d    +  ++ ++d+++haGD++ +         ++ +e l ++     v ++ Gnh+             a         +                                                           + ++ +l  ++ +vl++h  p++
  MMETSP1325-20131115|450_1 302 RLLLLSDTHDFQDG---MKYELPQADILVHAGDFTCRgtrdecsafQSWMESLLEAgtvkHVVVIAGNHElsfhdpasrskhTA---------VikaqekikadlvsvsgltyledsgcevcglkffgspwtlpikgksdwafqardlpgedgIGKYTELIPRDVDVLVTHSPPFG 465
                6899*******995...6677799*********9663455555555333444433333456********966544444333311.........12223333334455555555555555555555544444444444444444444444444433333322345566666666655 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.1e-06    0.0058     157     227 ..     126     192 ..     111     196 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHHSSTTSS-EEEES------HHHHHHHHHHHHHHHHT--TBEHHHHHHHHH.TTSTTSS-SHHHH CS
  PF00102.22 157 dlirkvrksktaksgpvvVhCsaGvgRtgtfvaldilleqleaeeekvdvlqivkelR.kqRpgmvqsleqY 227
                  ++r++r++    ++ + VhC+ Gv+R+ +++a+ ++ e+  +    ++ l++++ +R + Rp+ v++++ Y
   MMETSP1325-20131115|450_1 126 AFVRAARQQD--PDSLMYVHCMSGVNRAPSVAAAILIAEESCT--A-LEALSAIRDIRpAIRPKYVKEVAFY 192
                 5666666666..899*************999888877777766..3.8899999999977899888887766 PP

>> PF02776.13  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0025       6.9      71     107 ..      56      94 ..      48     139 .. 0.81
   2 ?    5.8   0.0    0.0028       7.8      10      43 ..     351     384 ..     345     392 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0025
                 -S--------HHHHHHHH------EEE----HHHHH..- CS
  PF02776.13  71 tsgpGatnaltglaeAyvdriPllvlsgqvptselg..q 107
                    pG++na+t+l e  +d+  + ++  +vp++e++  q
   MMETSP1325-20131115|450_1  56 GGRPGTANAVTSLLEFESDGRRITHIINCVPSDEEPtiQ 94 
                 446*****************************9999553 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0028
                 HHHHTT--EEB------SHHHHHHHHH-.--EE- CS
  PF02776.13  10 aLkalgvehvfgvpgssilplldalakedgirlv 43 
                 +L+a  v+hv+ + g+++l++ d +++++   ++
   MMETSP1325-20131115|450_1 351 LLEAGTVKHVVVIAGNHELSFHDPASRSKHTAVI 384
                 688999*******************999744444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.86u 0.36s 00:00:01.22 Elapsed: 00:00:01.12
# Mc/sec: 1102.75
//
Query:       MMETSP1325-20131115|455_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.66
# Mc/sec: 827.83
//
Query:       MMETSP1325-20131115|456_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.017   13.8   0.1      0.018   13.7   0.1    1.0  1  PF12751.2 Vacuolar segregation subunit 7


Domain annotation for each model (and alignments):
>> PF12751.2  Vacuolar segregation subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.3e-06     0.018      81     122 ..      15      56 ..      11      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.3e-06
  PF12751.2  81 advsdsdetfvyesnPpdsyperqkryh.srtPsatsmasqvd 122
                a +s s et v    P  + p r  r+h +rt ++ts  sqv 
  MMETSP1325-20131115|456_1  15 ASTSRSGETAVLMNYPARE-PMRTLRHHrARTGTSTSSRSQVG 56 
                67899******98777666.******9967***********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 261.42
//
Query:       MMETSP1325-20131115|449_1  [L=851]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.048   13.6   0.2        3.5    7.6   0.0    2.6  2  PF00932.14 Lamin Tail Domain
      0.092   13.4   0.0       0.22   12.1   0.0    1.6  1  PF07790.6  Protein of unknown function (DUF1628)


Domain annotation for each model (and alignments):
>> PF00932.14  Lamin Tail Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1     0.012        85      47      87 ..     120     157 ..     115     181 .. 0.67
   2 ?    7.6   0.0   0.00051       3.5       7      46 ..     675     714 ..     670     715 .. 0.92

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.012
  PF00932.14  47 dsgntyttasgvvllpgetlvvyagsaddptfklvwklqta 87 
                 + + ++++++gv  +pg+++v+  +++   ++ + w+++++
   MMETSP1325-20131115|449_1 120 RHNKDAKSPPGVLFTPGHYVVISSNAG---PPPDGWTEAQP 157
                 557788999999999*****9998876...44445555543 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.00051
  PF00932.14   7 aaaagnviiseydeggsnnkwielyNtgaaavdLsgWklk 46 
                 +a+++ v is  + g +++ +i l N+g+ ++ L+ +kl+
   MMETSP1325-20131115|449_1 675 SAVTSPVYISSFEIGEAQSRAISLVNPGGDPISLDSYKLA 714
                 678999********************************95 PP

>> PF07790.6  Protein of unknown function (DUF1628)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.2e-05      0.22      13      73 ..     649     713 ..     648     717 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.2e-05
  PF07790.6  13 vaitvIlaAviaafvfglaskeekaPqasldvkidssadtgke....vkiehkgGdsidlkdlki 73 
                + +++++a+ +a ++ + + ++++a +a  +  + ss + g+     +++ + gGd+i+l+++k+
  MMETSP1325-20131115|449_1 649 LFVVLVVAGLFALIISNNKTNQDSAVSAVTSPVYISSFEIGEAqsraISLVNPGGDPISLDSYKL 713
                66888889999988888865666665555532233333222223456*************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (851 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.33u 0.36s 00:00:01.69 Elapsed: 00:00:00.79
# Mc/sec: 2581.39
//
Query:       MMETSP1325-20131115|457_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-29  101.8   2.8    2.4e-29  101.8   1.9    2.6  2  PF06244.7  Protein of unknown function (DUF1014)
  ------ inclusion threshold ------
        7.7    4.8   6.0         22    3.3   4.4    1.5  1  PF04791.11 LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> PF06244.7  Protein of unknown function (DUF1014)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.1   9.4         2   1.4e+04       9      78 ..      88     153 ..      36     157 .. 0.68
   2 !  101.8   1.9   3.6e-33   2.4e-29       6     121 ..     154     272 ..     149     273 .. 0.84

  Alignments for each domain:
  == domain 1    score: -7.1 bits;  conditional E-value: 2
  PF06244.7   9 leeekkkeekeekkkkkkanvevelednlnenirdeeeetdeArtiddaiavLsvkdeevdrhpekrlkA 78 
                +e+e++k++++e+k++  a+ e+el   ++ + +   +++ + +  d  +a L+   +e+++ +  ++ A
  MMETSP1325-20131115|457_1  88 QEREEEKRRRDEEKRRALAAEEEELGS-MKAMAK---KKKGKKKDADPLMALLAEGTSEKNKTKFEKMEA 153
                333444444555555554444555544.344444...444444555667777776666666666666665 PP

  == domain 2    score: 101.8 bits;  conditional E-value: 3.6e-33
  PF06244.7   6 eerleeekkkeekeekkkkkkanv.evelednlnenirdeeeetdeArtiddaiavLsvkde..evdrhpekrlkAaykayeeenLPrlkeekpnlrlsQykqllwKefkkspdNPlNq 121
                ++++e+e+++++++++++   a+v e +l  +l+en++++ + +++A++id ai+ Ls        ++hpe+r kAay ++ee+++ +lkee p+l+ sQyk+ ++  +kkspdNP+Nq
  MMETSP1325-20131115|457_1 154 KRKKEKEERRKKQRDEEAAAAARVkEDPLVPELTENMNRQVSLEEDASGIDGAIDLLSGGGGggGLEKHPERRQKAAYAEFEERMMEQLKEEMPGLKRSQYKERIFNLWKKSPDNPMNQ 272
                4444444444444444444434445999999***************************7766889*****************************************************9 PP

>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   4.4    0.0032        22     224     302 ..      49     129 ..      39     203 .. 0.76

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.0032
  PF04791.11 224 rlledveeqisksateegklsrelkkaaesnsqeedslaldreenkivksee..klllikeedlksletlknkkaqrkvav 302
                 + ++  +++ ++ + +e++ +re  k+a++ ++  d++a++ree+k    ee  + l  +ee+l+s++ + +kk+ +k + 
   MMETSP1325-20131115|457_1  49 KAANQAVKDKQAADAAEAEAAREWSKGANNRKAGRDAAAQEREEEKRRRDEEkrRALAAEEEELGSMKAMAKKKKGKKKDA 129
                 5566677788888999999*********99999999999998877665444311456778999**********99888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1918  (0.140287); expected 273.4 (0.02)
Passed bias filter:                      596  (0.0435927); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                        30  (0.00219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.24u 0.40s 00:00:01.64 Elapsed: 00:00:00.90
# Mc/sec: 870.68
//
Query:       MMETSP1325-20131115|459_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   24.8   0.0    0.00016   21.2   0.0    2.2  2  PF13855.1  Leucine rich repeat
    0.00086   18.8   0.0      0.036   13.9   0.0    2.3  2  PF00560.28 Leucine Rich Repeat
     0.0014   18.0   0.0      0.043   13.3   0.0    2.4  2  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.12   11.9   0.0    1.1  1  PF13306.1  Leucine rich repeats (6 copies)
       0.13   12.3   0.2       0.27   11.3   0.1    1.9  2  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   5.9e-08   0.00016      19      52 ..       2      36 ..       1      45 [. 0.87
   2 !    5.0   0.0    0.0066        18      16      55 ..      24      61 ..      22      67 .. 0.81

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 5.9e-08
  PF13855.1 19 gaFkglsnLkvLdLsgnnl.ksispeafkgLpsLr 52
               ++F gl  L+ +dLs+nn+ + i +++f++ + L+
  MMETSP1325-20131115|459_1  2 DMFRGLRQLTAIDLSHNNIsHPIRAGTFANNKDLQ 36
               68999**************6689999999988887 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0066
  PF13855.1 16 ipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLn 55
               i+ g+F + + L+  ++ ++ ++ ++++af   +sL+++ 
  MMETSP1325-20131115|459_1 24 IRAGTFANNKDLQFASFAYTTITAVEAGAFG--RSLEHVW 61
               6789999999999999999999999999997..4666655 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   1.3e-05     0.036       1      21 [.       9      31 ..       9      40 .. 0.86
   2 ?    3.0   0.0      0.05   1.4e+02       1      13 [.      56      68 ..      56      70 .] 0.89

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.3e-05
                TESEEEETSSBCB.CHHHH.HHH CS
  PF00560.28  1 nLeeLdLsgNnlt.slpps.lsn 21
                +L+ +dLs+Nn++  +  + + n
   MMETSP1325-20131115|459_1  9 QLTAIDLSHNNIShPIRAGtFAN 31
                5999*********5588887776 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.05
                TESEEEETSSBCB CS
  PF00560.28  1 nLeeLdLsgNnlt 13
                +Le+  L g  lt
   MMETSP1325-20131115|459_1 56 SLEHVWLTGSGLT 68
                79*******9998 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   1.6e-05     0.043      20      37 ..       4      21 ..       2      50 .. 0.88
   2 ?    2.4   0.0     0.042   1.1e+02       2      13 ..      56      67 ..      55      69 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.6e-05
  PF12799.2 20 lanLpnLktLnLsnNpis 37
               + +L++L+ ++Ls+N+is
  MMETSP1325-20131115|459_1  4 FRGLRQLTAIDLSHNNIS 21
               678999**********98 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.042
  PF12799.2  2 nLevLdLsnNnI 13
               +Le+++L+++ +
  MMETSP1325-20131115|459_1 56 SLEHVWLTGSGL 67
               567777766655 PP

>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.3e-05      0.12       8      56 ..       4      55 ..       1      67 [. 0.45

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.3e-05
  PF13306.1  8 Fyncknltsitipssvts..IgeyaFsncsslksitlps.slteigeyaFsn 56
               F++ ++lt i+++ + +s  I + +F+n + l+  ++   ++t ++  aF  
  MMETSP1325-20131115|459_1  4 FRGLRQLTAIDLSHNNIShpIRAGTFANNKDLQFASFAYtTITAVEAGAFGR 55
               4444444444444433322344444444444444444321344444444433 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   9.8e-05      0.27       1      15 [.       7      21 ..       7      54 .. 0.93
   2 ?   -2.5   0.0       2.9   7.8e+03       3      10 ..      56      63 ..      55      69 .. 0.53

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 9.8e-05
  PF13516.1  1 lknLtsLdLsnNqig 15
               l +Lt +dLs+N+i+
  MMETSP1325-20131115|459_1  7 LRQLTAIDLSHNNIS 21
               579***********7 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.9
  PF13516.1  3 nLtsLdLs 10
               +L++  L 
  MMETSP1325-20131115|459_1 56 SLEHVWLT 63
               56665454 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.63
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|460_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0079   15.9   1.9        3.9    7.7   0.0    3.2  3  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.044   13.6   0.9      0.044   13.6   0.6    2.3  3  PF05725.7  FNIP Repeat
       0.19   11.8   5.6        4.4    7.5   0.1    3.0  3  PF13516.1  Leucine Rich repeat
       0.42   10.1   4.4         12    5.5   3.1    2.6  1  PF12799.2  Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.076   2.6e+02       2      16 ..      11      27 ..      10      34 .. 0.74
   2 !    5.1   0.2    0.0082        28       2      16 ..      33      52 ..      32      58 .. 0.74
   3 !    7.7   0.0    0.0011       3.9       2      19 ..      55      75 ..      54      78 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.076
                ESEEEETSS.BCB.CHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slp 16
                L++L L  + +lt ++ 
   MMETSP1325-20131115|460_1 11 LTSLILFKCeKLTgNIK 27
                78899999999997743 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0082
                ESEEEETSS.BCB.C...HH CS
  PF00560.28  2 LeeLdLsgN.nlt.s...lp 16
                ++ L+L+++ +l+ +   lp
   MMETSP1325-20131115|460_1 33 ITDLNLQSCrKLKgNikdLP 52
                6789*****99997755555 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0011
                ESEEEETSS.BCB.CHHHH.H CS
  PF00560.28  2 LeeLdLsgN.nlt.slpps.l 19
                ++ L+Ls + +l    pp+ +
   MMETSP1325-20131115|460_1 55 ITDLNLSWCeKLGgVMPPNiF 75
                678**********99999966 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.2     0.003        10      29      41 ..      26      38 ..       9      41 .. 0.57
   2 ?   13.6   0.6   1.3e-05     0.044       7      42 ..      26      61 ..      23      63 .. 0.85
   3 ?   -2.4   0.0       1.2   4.2e+03       8      16 ..      68      76 ..      66      80 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.003
  PF05725.7 29 igsLPnSlkeLyF 41
               i  LP+S++ L++
  MMETSP1325-20131115|460_1 26 IKDLPQSITDLNL 38
               4445555555554 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 1.3e-05
  PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyFg 42
               i  LP++++ L+l +  + k +i  LP+S++ L+++
  MMETSP1325-20131115|460_1 26 IKDLPQSITDLNLQSCRKLKGNIKDLPQSITDLNLS 61
               668**********666666777***********997 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 1.2
  PF05725.7  8 geLPsnlei 16
               g  P+n+  
  MMETSP1325-20131115|460_1 68 GVMPPNIFV 76
               667777755 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.46   1.6e+03       4      13 ..      11      20 ..      10      31 .. 0.70
   2 ?    6.0   0.2    0.0041        14       2      13 ..      31      42 ..      29      53 .. 0.80
   3 ?    7.5   0.1    0.0013       4.4       2      14 ..      53      66 ..      51      69 .. 0.81

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.46
  PF13516.1  4 LtsLdLsnNq 13
               LtsL L ++ 
  MMETSP1325-20131115|460_1 11 LTSLILFKCE 20
               7888887764 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0041
  PF13516.1  2 knLtsLdLsnNq 13
               +++t+L+L+++ 
  MMETSP1325-20131115|460_1 31 QSITDLNLQSCR 42
               689*******97 PP

  == domain 3    score: 7.5 bits;  conditional E-value: 0.0013
  PF13516.1  2 knLtsLdLsnNq.i 14
               +++t+L+Ls +  +
  MMETSP1325-20131115|460_1 53 QSITDLNLSWCEkL 66
               689*******9535 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   3.1    0.0035        12       3      17 ..      33      52 ..       2      66 .. 0.57

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0035
  PF12799.2  3 LevLdLsnN.....nIkdlp 17
                + L+L+++     nIkdlp
  MMETSP1325-20131115|460_1 33 ITDLNLQSCrklkgNIKDLP 52
               23344444433333344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.66
# Mc/sec: 301.36
//
Query:       MMETSP1325-20131115|461_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   13.9   0.3      0.083   13.2   0.2    1.3  1  PF11740.3 Plasmid replication region DNA-binding N-term


Domain annotation for each model (and alignments):
>> PF11740.3  Plasmid replication region DNA-binding N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   6.1e-06     0.083      18      78 ..       8      69 ..       2      78 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 6.1e-06
  PF11740.3 18 krPtveaVReelg.tGSpstisrvlkewreeqraaaesaapelPealsealaelvaalwqaa 78
               +r + e+ R++   tGSps+ s+vl++ ++e+ ++ + +a+e+ ++++++la++   l++++
  MMETSP1325-20131115|461_1  8 RRASRERGRARAHtTGSPSRCSEVLRKKEDELMNRKTLSAQETSPPVAASLAAFSSPLLEMM 69
               566777778888889*********************999999999********999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.31s 00:00:00.76 Elapsed: 00:00:00.87
# Mc/sec: 553.64
//
Query:       MMETSP1325-20131115|462_1  [L=449]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-53  180.2   6.7    2.7e-53  179.1   4.6    1.6  1  PF10155.4 Uncharacterized conserved protein (DUF2363)


Domain annotation for each model (and alignments):
>> PF10155.4  Uncharacterized conserved protein (DUF2363)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.1   4.6   1.9e-57   2.7e-53       1     125 [.     322     446 ..     322     447 .. 0.99

  Alignments for each domain:
  == domain 1    score: 179.1 bits;  conditional E-value: 1.9e-57
  PF10155.4   1 ienNpkiaiellvklakseefkeyldvlisvdvtvqslEvvnklskevklpeefvqaYikncistceeikdkqaqdrlvrlvavlikkLirekvlnvkelltevqaFclefskireataLfklik 125
                +enNp iaie l+kl++s++++eyl +l+++d++++s+Evvn+l+++v+lp+ef++ Yi+ncis+ce+ikdk++q+rlvrlv+v++++Lir+k++nv++l++evqaFc+efs+irea+ Lf+l+k
  MMETSP1325-20131115|462_1 322 VENNPMIAIECLLKLMSSSQLNEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLK 446
                79*************************************************************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.35s 00:00:01.14 Elapsed: 00:00:00.56
# Mc/sec: 1921.36
//
Query:       MMETSP1325-20131115|464_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0041   16.9   0.3        1.2    9.2   0.0    2.2  2  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
       0.01   15.5   0.2        5.7    7.2   0.0    2.2  2  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.2    0.0016        11       2      13 ..       2      13 ..       1      24 [. 0.78
   2 !    9.2   0.0   0.00018       1.2       2      21 ..      24      45 ..      18      47 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0016
  PF13516.1  2 knLtsLdLsnNq 13
               +++t+L+L ++ 
  MMETSP1325-20131115|464_1  2 QSITDLNLRSCT 13
               689*****9885 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00018
  PF13516.1  2 knLtsLdLsnNq.i.gdeGlsa 21
               +++t++dLs+++ + g++ ++a
  MMETSP1325-20131115|464_1 24 QSITYFDLSYCDkLeGKDQAKA 45
               689********84445555655 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1   0.00086       5.9       2      16 ..       4      20 ..       3      27 .. 0.76
   2 ?    7.2   0.0   0.00084       5.7       1      13 [.      25      38 ..      25      51 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00086
                ESEEEETSS.BCB.CHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slp 16
                ++ L+L+++ +l+ ++ 
   MMETSP1325-20131115|464_1  4 ITDLNLRSCtKLEgNIK 20
                678*********98853 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.00084
                TESEEEETSS.BCB CS
  PF00560.28  1 nLeeLdLsgN.nlt 13
                ++++ dLs++ +l+
   MMETSP1325-20131115|464_1 25 SITYFDLSYCdKLE 38
                5799******9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|458_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-63  211.6   0.0    7.4e-63  211.2   0.0    1.1  1  PF02750.9  Synapsin, ATP binding domain
    1.3e-07   31.5   0.0    6.4e-07   29.3   0.0    2.0  2  PF02078.11 Synapsin, N-terminal domain
    1.7e-05   24.2   0.0    3.1e-05   23.3   0.0    1.4  1  PF08443.6  RimK-like ATP-grasp domain


Domain annotation for each model (and alignments):
>> PF02750.9  Synapsin, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.2   0.0   1.6e-66   7.4e-63       1     202 [.     147     361 ..     147     362 .. 0.94

  Alignments for each domain:
  == domain 1    score: 211.2 bits;  conditional E-value: 1.6e-66
                S-HHHHHHTSSHHHHHHHHHHHHHH--.....--SS-B---EEESSGGG----SSSSEEEE----------EEE-SHHHHHHHHHHHHHHT.......S-EEEEE----SEEEEEEE----EEEEEEEE-----STT---EEEEEE---HHHHHHHHHHTT------SEEEEEEE.------EEEEEE----------HHHHHHHHHHHHHHHHH CS
  PF02750.9   1 nslesvynfcdkpwvlaqlvkifkklg.....aekfplieqtyypnhkemltapkfpvvvklghahsgmgkvkvenqhdfqdiasvvaltk.......tyataepfidskydirvqkignnykaylrtsisgnwkantgsamleqiamseryklwvdecselfggldivavkalh.gkdgrdyiievvdssmpligehqeedkqliaelvvskms 202
                ns+ s+y fc+k  v a+l +i ++ g      e fp++ q y+   +em+ +  fp vvk+g ah+gmgk+ ++++h+++d  + +a+tk       +y+ ae f++  yd+r+qkig+ y+++ r s+sg wk+ntgs+ le i+++ +yk w de +++fggldi +v+a+h +  gr+yi+ev+++s  l  ++ eed+  i +lv++km+
  MMETSP1325-20131115|458_1 147 NSFSSIYSFCEKAVVQAELFNISRRCGmdangDEIFPVMPQQYFASFQEMMYTQAFPAVVKIGSAHAGMGKMMINDHHQMEDFRTCLAMTKgsgdstsAYCCAEEFVEGDYDLRIQKIGEHYRCFKRISVSGAWKTNTGSSRLEHIELTPKYKRWADEAAQMFGGLDILTVDAIHeSSTGREYILEVNGTSSGLAPDTSEEDNIHIRDLVIEKMN 361
                89********************9987622222688******************************************************985555544699*************************************************************************94568***********************************7 PP

>> PF02078.11  Synapsin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   1.4e-10   6.4e-07       9     105 .]      47     145 ..      39     145 .. 0.82
   2 ?   -1.0   0.0      0.37   1.7e+03      25      39 ..     250     264 ..     228     281 .. 0.80

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 1.4e-10
                 EEEE..S-TTS-HHHHH---EE---EEEEEEEE-GGGEEEEEE-----EEEEEE..E----EEEEEE--SEEEE-S-S--SS-----HHHH---------E CS
  PF02078.11   9 llvi..ddphtdwakyfrgkkvlgdidikveqaefselnlvayadgglavdlqv..lrngtkvvrsfkpdfvlvrqhafsmaenedyrslviglqyaglps 105
                 llvi  d+ +++wa  ++g  v     i v q+ ++++  +a  ++++ + +++   +   k   +++pdf l+r+ +      +dyr+ ++gl +ag+ s
   MMETSP1325-20131115|458_1  47 LLVIasDKDKAEWATLMNGLSVEDGRSIEVTQCGWDDIMCAAEPKSSVPIVVHLrkSKLHPKRPTTLRPDFALIRNEVSVPG--KDYRNQMFGLMFAGVQS 145
                 5665447889********************************988887655554004445566779**********987665..9*************965 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.37
                 --EE---EEEEEEEE CS
  PF02078.11  25 gkkvlgdidikveqa 39 
                    v gd+d++++++
   MMETSP1325-20131115|458_1 250 EEFVEGDYDLRIQKI 264
                 456899***999875 PP

>> PF08443.6  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   6.9e-09   3.1e-05      38     168 ..     198     336 ..     186     358 .. 0.80

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 6.9e-09
  PF08443.6  38 k..qfPvvvKsvfgsqGikvvlaedkqsleql...leafkqlkeai.......lvQefIeeaenrdiRvlVvgdevvaalervskeGdfrsNlarGgvaeklqlseeeeelaikaaeam.eldvlgvD.ileskrg.llvlEvNss 168
                    fP vvK   +  G++ ++++d+ ++e+    l   k+               ef+e     d+R+  +g+     ++r+s  G +++N+   ++ e ++l+++ ++ a +aa+++ +ld+l vD i es  g  ++lEvN  
  MMETSP1325-20131115|458_1 198 YtqAFPAVVKIGSAHAGMGKMMINDHHQMEDFrtcLAMTKGS---GdstsaycCAEEFVEGDY--DLRIQKIGEHY-RCFKRISVSGAWKTNTGS-SRLEHIELTPKYKRWADEAAQMFgGLDILTVDaIHESSTGrEYILEVNGT 336
                3348*********************99988761114444443...244477778999998665..*******9776.789************965.799******************99459******888887773699****63 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.41s 00:00:01.13 Elapsed: 00:00:00.67
# Mc/sec: 1588.03
//
Query:       MMETSP1325-20131115|466_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 684.05
//
Query:       MMETSP1325-20131115|465_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.07   12.7  18.5       0.05   13.1   1.7    4.1  4  PF00612.22 IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.2    0.0001       1.4       3      17 ..      35      49 ..      33      53 .. 0.86
   2 ?    0.9   0.3      0.03   4.1e+02       9      17 ..      64      72 ..      64      74 .. 0.88
   3 ?   13.1   1.7   3.6e-06      0.05       5      21 .]      96     112 ..      94     112 .. 0.93
   4 ?   -1.7   0.1      0.21   2.8e+03      14      20 ..     114     120 ..     114     121 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0001
                HHHHHHHHHHHHHHH CS
  PF00612.22  3 aaikIQaawRgylaR 17
                +a++IQ+ +Rg   R
   MMETSP1325-20131115|465_1 35 SAMRIQRLFRGQFIR 49
                8**********8777 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.03
                HHHHHHHHH CS
  PF00612.22  9 aawRgylaR 17
                +++Rg+ aR
   MMETSP1325-20131115|465_1 64 RVYRGHAAR 72
                689****99 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 3.6e-06
                 HHHHHHHHHHHHHCHCH CS
  PF00612.22   5 ikIQaawRgylaRkryk 21 
                 i++Q+a+Rgy  R++y+
   MMETSP1325-20131115|465_1  96 IMMQRAFRGYYSRRYYH 112
                 89*************96 PP

  == domain 4    score: -1.7 bits;  conditional E-value: 0.21
                 HHHHCHC CS
  PF00612.22  14 ylaRkry 20 
                 y aRk+y
   MMETSP1325-20131115|465_1 114 YSARKKY 120
                 679***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       596  (0.0435927); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.39s 00:00:01.10 Elapsed: 00:00:00.67
# Mc/sec: 1427.08
//
Query:       MMETSP1325-20131115|468_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 629.63
//
Query:       MMETSP1325-20131115|467_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-29  102.3   0.0    1.9e-29  102.0   0.0    1.1  1  PF00071.17 Ras family
    0.00026   21.3   0.0    0.00041   20.7   0.0    1.3  1  PF08477.8  Miro-like protein
     0.0024   17.2   0.0     0.0065   15.8   0.0    1.6  1  PF00009.22 Elongation factor Tu GTP binding domain


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.0   0.0   4.1e-33   1.9e-29      22     161 ..      59     199 ..      50     200 .. 0.94

  Alignments for each domain:
  == domain 1    score: 102.0 bits;  conditional E-value: 4.1e-33
                 SSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST..TTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17  22 dkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae..envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                    + e ++Ti ++ ++k+i++++ +   ei D AG +e+++l ++   +++g ll+y+ +sr+sf++v+ + + + ++    env+ vLv++ +Dl+ +r+vs+eeg++la++ +++f+e+SAk+n nv+e+f++l+rei+
   MMETSP1325-20131115|467_1  59 RAIRGEIDPTI-ENTFQKTIRFKKVQFFTEIVDSAGMDEYSRLSRNASVGVHGYLLLYAANSRNSFSKVQAIDDLLLEMHGgsENVARVLVATMIDLDGERTVSYEEGQALADSRNIPFIECSAKENINVTEVFTTLIREIE 199
                 55567889***.9*********************************************************999988888878999******************************************************996 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   8.9e-08   0.00041      46     119 .]      80     153 ..      55     153 .. 0.80

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 8.9e-08
  PF08477.8  46 dvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                ++ +   e+ d +g +e ++    ++  + ++ll+y+ ++++s+++v+++ + l e+ +  ++++ +lv++++D
  MMETSP1325-20131115|467_1  80 KKVQFFTEIVDSAGMDEYSRLSRNASVGVHGYLLLYAANSRNSFSKVQAIDDLLLEMHGGSENVARVLVATMID 153
                22222357889999999999888889999*********************999*****98888*********98 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.4e-06    0.0065      62     187 ..      78     199 ..      66     200 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.4e-06
                 EEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-...S-HHHHHHHHH.H..HHTT--EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHHHSC CS
  PF00009.22  62 sleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG...vepqTeevlrl.a..kklgvkiivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaivellp 187
                  ++  + ++   ++D+ G +++s+   ++   + g++l+ +a+      ++q    l l +   +++v +++v + iD+ +++    +ee +  l      ++ +++p++ +Sa++++++ +++ ++++ ++
   MMETSP1325-20131115|467_1  78 RFK--KVQFFTEIVDSAGMDEYSRLSRNASVGVHGYLLLYAANSRnsfSKVQAIDDLLLeMhgGSENVARVLVATMIDLDGERTVS-YEEGQ-AL-----ADS-RNIPFIECSAKENINVTEVFTTLIREIE 199
                 344..5666789*******************************88777455544443330211468888*********99877653.33333.34.....333.48******************99998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.42s 00:00:00.89 Elapsed: 00:00:00.66
# Mc/sec: 845.99
//
Query:       MMETSP1325-20131115|469_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 643.23
//
Query:       MMETSP1325-20131115|470_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-10   40.1   0.1    3.2e-06   27.0   0.1    2.1  2  PF09346.5 SMI1 / KNR4 family (SUKH-1)


Domain annotation for each model (and alignments):
>> PF09346.5  SMI1 / KNR4 family (SUKH-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   1.3e-05      0.18       2      51 ..      28      72 ..      27      79 .. 0.88
   2 !   27.0   0.1   2.3e-10   3.2e-06      77     129 ..      79     127 ..      70     128 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.3e-05
  PF09346.5  2 ateedlqefekdlgikLPndyreflkltsenniesgglifglklmsldei 51
                + +d++++e+dlg+ LP  +  f++     + ++gg +f  k+m   e 
  MMETSP1325-20131115|470_1 28 MDASDVARLESDLGVELPIGLSLFME-----QAGGGGVWFYEKEMLPAES 72
               5789**********************.....6999999999999987765 PP

  == domain 2    score: 27.0 bits;  conditional E-value: 2.3e-10
  PF09346.5  77 fappmwipiatdgggnyigidlspaseggqvilfgrdfdekfqiadsfgdFLl 129
                 + ++++p+a+d + n++ +d+ ++     v+ ++ d +  +++a++f+dFL+
  MMETSP1325-20131115|470_1  79 ELDDGCVPFASDVDSNLYVVDTGNK---DAVYEWDDDGRG-EKVASNFEDFLE 127
                57899******************99...99*****88666.899********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|472_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-20   73.4   0.0      2e-20   72.7   0.0    1.3  1  PF00072.19 Response regulator receiver domain
  ------ inclusion threshold ------
       0.13   11.7   0.0        0.2   11.2   0.0    1.4  1  PF13489.1  Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF00072.19  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.7   0.0   2.9e-24     2e-20       1     111 [.      95     209 ..      95     210 .. 0.88

  Alignments for each domain:
  == domain 1    score: 72.7 bits;  conditional E-value: 2.9e-24
                 EEEESSSHHHHHHHHHHHHHTTSEEEEEESSSHHHHHHHHHHHESEEEEESS-TT----HHHHHHHHHT......TTSEEEEEES-TTHHHHHHHHHTT-SEEEESS--HHHHHHHH CS
  PF00072.19   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireee......pklpiivvtahgeeedalealkaGakdflsKpfdpeelvkav 111
                 +l+vdD+++vr+ ++++le+egy  ++ a++g+eal+ +k++ +D++++D+emp m+G + +k +r+ e       +  i +v ++ + e  +ea++ G++ + sKp + ++lv+++
   MMETSP1325-20131115|472_1  95 ILVVDDSRVVRKYVARLLEREGY-TIDFAANGHEALARMKKRFYDCVFMDLEMPVMNGQDCTKALRTWEaaidrsRRQMICAV-SSPSAEKEEEAISSGIDVYQSKPAPAAKLVETI 209
                 89*********************.******************************************99989975322223333.334467889*********************987 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0     3e-05       0.2       7      53 ..     102     145 ..      99     224 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3e-05
  PF13489.1   7 reladllerllarlkpggrvLDiGcGtGillellaengfdvtgvDps 53 
                r +++ ++rll   ++ g  +D+++++++ l+ ++++++d+++ D+ 
  MMETSP1325-20131115|472_1 102 RVVRKYVARLL---EREGYTIDFAANGHEALARMKKRFYDCVFMDLE 145
                55667777887...6789999************************93 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.63
# Mc/sec: 855.84
//
Query:       MMETSP1325-20131115|471_1  [L=682]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.1e-255  849.0   9.6   1.3e-255  848.8   6.7    1.0  1  PF00012.15 Hsp70 protein
    2.5e-12   45.9   0.6    4.3e-10   38.5   0.1    2.8  2  PF06723.8  MreB/Mbl protein
     0.0075   15.9   7.8       0.95    9.2   0.0    4.9  3  PF14450.1  Cell division protein FtsA
  ------ inclusion threshold ------
          2    7.7   6.5        4.6    6.5   4.5    1.6  1  PF05529.7  B-cell receptor-associated protein 31-like


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  848.8   6.7  3.9e-259  1.3e-255       1     601 [.      50     647 ..      50     648 .. 0.99

  Alignments for each domain:
  == domain 1    score: 848.8 bits;  conditional E-value: 3.9e-259
                 EEXEEXXXXEEBXEEEXXXXEEEXXXTTXXSSEESEEEEXXX.SEEXXXCCCTTTTTTGGGEEEXGGGTXXXBTTSTTHHHHHHHXSSEEEEETTTEEEEEEEXX..EEEEXHHHHHHHHHHHHHHHHHHHHSS.XXEEEEEEXTTXXHHHHHHHHHHHHHXXXEEEEEEEHHHHHHHHXXXTTSX.XEEEEEEEEXXXXEEEEEEEEEXXEEEEEEEEEETTXXXXHHHHHHHHHHHHHHHHHSS.XGGGSHHHHHHHHHHHHHHHHHTTCSSCSEEEEEEEEEETXT.EEEEEEEEHHHHHHHCHHHHCTTTHHHHHHHHHCTXXCCCESEEEEEXXETTSHHHHHHHHHHTXXXEEXSSXTTTTTTXXXTTCHHHCSSSSXXXXXXECEEESS-E-EEEEE--EEEEESTTCESSEEEEEEEEESCCCESSEEEEEEES-GSSGGGSEEEEEEEEE---S-------EEEEEEE-----EEEEEEESE---EEEEEE-TT----HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSHHHHHHHHHHHHHHHHHHT----HHHHHHHHHHHHHCHHHHHHHHH CS
  PF00012.15   1 viGiDLGttnsvvavmeggkvevianeegnrttPsvvaFtkk.erlvGeaAkrqavtnpkntvfsvkrliGrkfsdpevqkeikhlpykvvkkengkavvevealgekkkftpeeisamvLkklketaeaylgekvtdavitvPaYFndaqRqatkdAgkiAGLnvlRivneptaaalaYGldkkdkernvlvfDlGggtfdvSileiedGvfevkatagDthlGGedfDealvehlveefkkkegidlskdkkalqrLreaaekaKkeLSsssqteinleietldedg.kdlsekltRakfeeLvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfgkepsksvnpDeavAiGaAvqaavlsgeeevkdllllDvtpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelakdnkllgkfeltgippaprGvpqieVtfdidanGiltvsakdkstgkeekitieaseglsedeiekmvkeaeesaeedkkkkeaieakneleelvyslekkleeekekvseaekekkveeaieelkeelegedkeeieakleelekvvekivekly 601
                 viGiDLGttns+va+meg+ ++vi+n+eg+rttPsvvaF  + erlvG aAkrq vtnp+nt++++krliGrkf+d+evq+ +++++yk+vk+++g     ++ +g+  k++p+++++mvL k+ketae +lg++v++av+tvPaYFndaqRqatkdAgkiAGL++lRi+neptaa+laYG+dk ++   v+vfDlGggtfdvSilei+ Gvfevk+t+gDt lGGedfDe+l++hl++efk++++idls d+ a+qrLreaaekaK+eL   +qte++l+++t+d++g k+l+ k+++a+fe +v++l++rt+ p+ek++kda++++++++ev+lvGG++R+Pkvqe+v+ +fgk ps++vnpDe+vA+GaA+q++vl+g  +vkd+lllDvtpLslgietlggv+t l+ rnttiptkk qvfsta+dnq++v+i+vlqger++a+dnk+lg+f+lt ippaprG+pqieV+fdida+Gil+vsakdk+tgke+++ i+++ gls+deie+mv++ae++a++d+++k+ +ea+n++++ v s+ek+l+e+ +k+s++ k +++++ai+e k++ e ed+e+++++  +l++++ ki++++y
   MMETSP1325-20131115|471_1  50   647
                 79*************************************9999*************************************************998855555555788..9*******************************************************************************************************************************************************************************************************************************************************************************..**********************************************************************************************************************************************************************************.*************************************9987 PP

>> PF06723.8  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.0     0.003        10       4      39 ..      51      95 ..      48     115 .. 0.62
   2 !   38.5   0.1   1.3e-13   4.3e-10      93     194 ..     183     290 ..     165     423 .. 0.63

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.003
               E--B----EEEE.-------.-EEE.......ES-EEEEST---E CS
  PF06723.8  4 lgiDLGtantlv.yvkgkgi.vlne.......psvvAikkktkkv 39
               +giDLGt+n  v  ++g+   v+++       psvvA+  + +++
  MMETSP1325-20131115|471_1 51 IGIDLGTTNSCVaIMEGRAArVIENaegarttPSVVAFPADGERL 95
               9********998445555431332112222226777766665554 PP

  == domain 2    score: 38.5 bits;  conditional E-value: 1.3e-13
                --EEEE-------HHHHHHHHH--------EEEE--HHHHHH------TTS----E..EEE-----EEEEEE--.--EEEEEEES....----HHHHHHHHHHHHHHSB CS
  PF06723.8  93 kprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpveepsgnm..vvdiGggttevavisl.ggivtsksvr....vaGdeldeaiikyirkkynl 194
                 ++ v++vP   ++ +r+A k+a k aG +   +i+ep aA +  g++ +   g +  v d+Gggt +v+++ + gg+ + ks      ++G+++de+++k++ ++++ 
  MMETSP1325-20131115|471_1 183 VSKAVVTVPAYFNDAQRQATKDAGKIAGLDILRIINEPTAASLAYGMDKAT-DGALvaVFDLGGGTFDVSILEIsGGVFEVKSTNgdtlLGGEDFDEELLKHLLSEFKR 290
                46889******************************************9655.45541368************972566677776444448************9998864 PP

>> PF14450.1  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00028      0.95       1      24 [.      50      73 ..      50      83 .. 0.83
   2 ?    4.1   0.6     0.011        36      64      90 ..     180     314 ..     164     425 .. 0.60
   3 ?    2.1   0.1     0.043   1.5e+02      20      61 ..     581     618 ..     574     644 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00028
               xxxxxxxxxxxxxxxxxxxxxxxx RF
  PF14450.1  1 valvDiGagktdvavaekgklgel 24
               v+++D+G++ ++va++e+ + + +
  MMETSP1325-20131115|471_1 50 VIGIDLGTTNSCVAIMEGRAARVI 73
               79***************9665544 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.011
                xxxxxxxxxxx............................................................................................................xxxxxxxxxxxxxxxx RF
  PF14450.1  64 klkigsaivss............................................................................................................ggaalknleelaerag 90 
                ++++ +a+v++                                                                                                            +  a+++l+e+ae+a 
  MMETSP1325-20131115|471_1 180 GRTVSKAVVTVpayfndaqrqatkdagkiagldilriineptaaslaygmdkatdgalvavfdlgggtfdvsileisggvfevkstngdtllggedfdeellkhllsefkressidlsgDNLAMQRLREAAEKAK 314
                555555555335555444444444444444445555555566666666666666666666666666666666666666666666666666666666666666666666666666666664444444444444444 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.043
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF14450.1  20 klgelrvigvGeqksrgikgghItdiddiakalktaveeAer 61 
                ++++++v+++   ks   +g+ I   d++++ ++ a++eA+ 
  MMETSP1325-20131115|471_1 581 NDVDTAVFSTE--KSLSEHGDKIS--DELKEEIQAAIDEAKA 618
                45555555555..899999*****..**************86 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.5    0.0013       4.6     125     188 ..     558     637 ..     552     639 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0013
  PF05529.7 125 elvkleeklealkkqaesatkaakkl.......keekekklkeeveklkkelee.........kekdlealkkqaeglqk 188
                ++v+  e + a++++ ++ ++a +++       +++ +++ ++  ++lk+e+++         + +d+ealk+q  +lq+
  MMETSP1325-20131115|471_1 558 QMVRDAEANAAADEERKALVEARNDVdtavfstEKSLSEHGDKISDELKEEIQAaideakasrESEDVEALKEQHTKLQE 637
                45555555555555555444544444888787756666666666777888887799999999999***********9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       869  (0.0635606); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.15u 0.37s 00:00:01.52 Elapsed: 00:00:01.21
# Mc/sec: 1350.67
//
Query:       MMETSP1325-20131115|474_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-08   34.5   0.0    1.5e-08   34.3   0.0    1.0  1  PF12689.2 Acid Phosphatase


Domain annotation for each model (and alignments):
>> PF12689.2  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   1.1e-12   1.5e-08      67     132 ..       1      79 []       1      79 [] 0.84

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 1.1e-12
                EE--S--...---HHHHHHTT--..............--ESEEEE--.....-.-HHHHHHHHHHH----GGGEEEEES CS
  PF12689.2  67 ASrtdap...dlArelLklLein....eakekekklldvfdaveiyp.....g.sktkhfkkiqkktgieyeemlFFDd 132
                AS++d+p   ++Ar++L +Le+      ++  +  + + +++++i++     + +  +hf  ++++tg+ey++m+FFD+
  MMETSP1325-20131115|474_1   1 ASSADTPfavKIARKALTMLEVVpgvtVREVFSMGWEEGVENMQIGRtpplsSnKAETHFPILREQTGVEYNQMIFFDE 79 
                78889888889***********988766677788888999999999966665424568********************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.69
# Mc/sec: 274.37
//
Query:       MMETSP1325-20131115|475_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   12.2   3.2        0.2   11.7   2.2    1.2  1  PF07941.6 Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.2   1.5e-05       0.2      38      57 ..      25      44 ..      11      46 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.5e-05
               TTXXXHHHHSSXSXXXXXXX CS
  PF07941.6 38 aaaaaavaaataaveGeGGs 57
               ++ +aavaaa+aa eG+GG+
  MMETSP1325-20131115|475_1 25 TSNTAAVAAAAAAAEGHGGE 44
               345788999999******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.64
# Mc/sec: 250.87
//
Query:       MMETSP1325-20131115|478_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-21   74.9   0.1    6.6e-21   74.2   0.0    1.3  1  PF02801.17 Beta-ketoacyl synthase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02801.17  Beta-ketoacyl synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.2   0.0   4.9e-25   6.6e-21      42     118 ..      15      89 ..       2      90 .. 0.90

  Alignments for each domain:
  == domain 1    score: 74.2 bits;  conditional E-value: 4.9e-25
                 GGGECEEE----------HHHHHHHHHH--...TT..CEEE-GGGT----------HHHHHHHHHHH---B---TT- CS
  PF02801.17  42 pedvdyveahGtGtplgDpiEaealkavfgekarkqplavgSvKsniGHleaAaGvaelikvvlalrhgvipptlnl 118
                  ++vdy+++hGt+tp gD  E+ a+k+vf+ +++k   +vgS+Ks  GH ++AaGv e+i ++l+++++ ++ ++n+
   MMETSP1325-20131115|478_1  15 DKKVDYINTHGTSTPIGDLKELGAVKNVFEGEGYK--PWVGSTKSLSGHDLGAAGVHEAIYSLLMMNNDFLAESANI 89 
                 489***************************99977..9*********************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 954.19
//
Query:       MMETSP1325-20131115|480_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 365.55
//
Query:       MMETSP1325-20131115|481_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 369.96
//
Query:       MMETSP1325-20131115|473_1  [L=470]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-12   45.2   0.0    1.6e-11   44.1   0.0    1.5  1  PF02214.17 K+ channel tetramerisation domain
  ------ inclusion threshold ------
      0.067   12.7   4.2       0.12   11.8   2.9    1.4  1  PF13874.1  Nucleoporin complex subunit 54


Domain annotation for each model (and alignments):
>> PF02214.17  K+ channel tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   2.3e-15   1.6e-11       1      89 [.     120     206 ..     120     211 .. 0.90

  Alignments for each domain:
  == domain 1    score: 44.1 bits;  conditional E-value: 2.3e-15
  PF02214.17   1 vklNVgGkrfetskstLsrfpdtlLgklaeteelddydeeeneyffDRspkaFetiLnyyrtggklhrpeelclksfleElefygleel 89 
                 ++l VgG++fe+sk++Ls    +lL +l++ e+  + d e++ + +DR+  +F++iL ++r+ g +++  + ++ ++ +E+ f++le+l
   MMETSP1325-20131115|473_1 120 IRLRVGGQMFEVSKHVLSLDSGSLLAALCNDESPLEVDREDQVVVVDRDWWLFRYILIFLRD-GLVPED-RPTALQLYREAAFWRLETL 206
                 6899**************889*********7767788888999*******************.666664.77999***********987 PP

>> PF13874.1  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.9   1.8e-05      0.12      77     121 ..      54      98 ..      30     104 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.8e-05
  PF13874.1  77 akqkhqelshrllkvaakleilrnkgyalsaeeeelrnkleqlek 121
                ++q+ ++l+++ lk+a++ + lr+ + + ++ee++++++ e+le+
  MMETSP1325-20131115|473_1  54 VEQRAASLQRQALKLARQRAFLREERKRARKEEKKIAEDKEKLEH 98 
                689***********************************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       886  (0.064804); expected 273.4 (0.02)
Passed bias filter:                      389  (0.0284523); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.41s 00:00:01.29 Elapsed: 00:00:00.64
# Mc/sec: 1759.82
//
Query:       MMETSP1325-20131115|482_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-10   37.9   0.5    4.3e-09   35.5   0.3    2.0  1  PF00018.23 SH3 domain
    2.9e-07   29.7   0.0    6.4e-07   28.6   0.0    1.5  1  PF07653.12 Variant SH3 domain


Domain annotation for each model (and alignments):
>> PF00018.23  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.3   6.3e-13   4.3e-09       1      48 []      71     122 ..      71     122 .. 0.87

  Alignments for each domain:
  == domain 1    score: 35.5 bits;  conditional E-value: 6.3e-13
                 EESS-BE-SSTTS-EB-TT-EE......EEEEESSSSEEEEEETTTTB---EEG CS
  PF00018.23   1 iAlYDYearesdELsfkkGDvi......ivleksedgWwkgrlkgtgkeGliPs 48 
                 +Al+D++++++++L+f +GDv+      + l ++++gW+kgr++  g eG +Ps
   MMETSP1325-20131115|482_1  71 VALFDFPGVQDGDLPFAEGDVFeadsaeFDLHENDGGWVKGRKD--GAEGVFPS 122
                 7********************944444447888999********..68*****8 PP

>> PF07653.12  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   9.3e-11   6.4e-07       2      53 ..      70     126 ..      70     127 .. 0.87

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 9.3e-11
                 EEE-S-B--SS-----B----EEEEE......E-S----BEEEE-TT---B--HHHH CS
  PF07653.12   2 vraiedyvaedpeeLslkkGDvikvl.....gskesdgwwegesgGrvGlfPsslVe 53 
                 v+a++d+ +   ++L + +GDv+++        ++++gw +g++ G +G+fPs++V+
   MMETSP1325-20131115|482_1  70 VVALFDFPGVQDGDLPFAEGDVFEADsaefdLHENDGGWVKGRKDGAEGVFPSNYVQ 126
                 699*********************986666433455599*****************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|483_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   20.9   0.0    0.00017   20.6   0.0    1.0  1  PF01545.16 Cation efflux family


Domain annotation for each model (and alignments):
>> PF01545.16  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.2e-08   0.00017      98     192 ..       7     101 ..       3     104 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 1.2e-08
  PF01545.16  98 eidapeialgvalisllvnlllalllrragrksskrssalravalhvlgdalgslgvlvaallilftglnl..ylDpilsllial.iilytglpllke 192
                 + + p+++lg+ + s+l++l+l  l  r+g+k+   s++l  ++  +l+ + +s gv+++a++i   ++    +lD+++++ +++ +++y  + l+k+
   MMETSP1325-20131115|483_1   7 PPEEPGLLLGLSAPSVLIFLVLGVLKYRVGKKID--SPSLAKDGVCSLCGSGLSFGVCLGAAFIEQENY-AvwWLDATIAVTVSIgLYFYGLYTLIKN 101
                 56778888888********************999..******************************554.459*******999984566666766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.57
# Mc/sec: 471.01
//
Query:       MMETSP1325-20131115|484_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 517.11
//
Query:       MMETSP1325-20131115|485_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.87
# Mc/sec: 694.12
//
Query:       MMETSP1325-20131115|486_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 685.36
//
Query:       MMETSP1325-20131115|488_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-20   72.7   4.8    2.5e-20   72.2   3.3    1.2  1  PF03144.20 Elongation factor Tu domain 2


Domain annotation for each model (and alignments):
>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.2   3.3   1.8e-24   2.5e-20       1      74 []      61     130 ..      61     130 .. 0.97

  Alignments for each domain:
  == domain 1    score: 72.2 bits;  conditional E-value: 1.8e-24
                 EEEEEEEEEE--EETTEEEEEET.TTCTEEEEEEEEEEEEETTCEESEEECEE--EEEESSSGGGGGTT---EEE CS
  PF03144.20   1 GtvatgrvysGtlkkGdtvrilg.ndtskkeivtrvrsletfngdldeavaganaGvivaikgledaiikGdtlt 74 
                 Gtvatgr+++G++++Gdt++i+g  +t ++   t+v+++e+f++ ld   ag+n+G++++++++ed i++G++l+
   MMETSP1325-20131115|488_1  61 GTVATGRIERGVINVGDTIEIVGlAET-QS---TTVTGVEMFQKTLDSGMAGDNVGILLRGVQKED-IERGMVLS 130
                 9**********************8877.88...*********************************.******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.31s 00:00:00.73 Elapsed: 00:00:00.67
# Mc/sec: 475.69
//
Query:       MMETSP1325-20131115|489_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 794.58
//
Query:       MMETSP1325-20131115|487_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.052   13.4   0.5      0.084   12.7   0.4    1.4  1  PF07464.6 Apolipophorin-III precursor (apoLp-III)


Domain annotation for each model (and alignments):
>> PF07464.6  Apolipophorin-III precursor (apoLp-III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   6.2e-06     0.084      24      71 ..     188     236 ..     159     238 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 6.2e-06
  PF07464.6  24 dtqevvkaikegsdkvlqqlkalkasLdealkdangka.kealeqlrek 71 
                + ++v +a+ e+ ++   ql   +  L+e l+da+  + ke +e+ r++
  MMETSP1325-20131115|487_1 188 KEKDVATAWTEQVNSLQAQLVGWSMDLQEKLEDAELAIeKEEIEEIRKN 236
                5689*****************************8744425666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       562  (0.0411059); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.40s 00:00:00.95 Elapsed: 00:00:00.60
# Mc/sec: 990.49
//
Query:       MMETSP1325-20131115|492_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.60
# Mc/sec: 678.97
//
Query:       MMETSP1325-20131115|494_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        64  (0.0046811); expected 273.4 (0.02)
Passed bias filter:                       62  (0.00453482); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.63
# Mc/sec: 197.79
//
Query:       MMETSP1325-20131115|495_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.80
# Mc/sec: 119.82
//
Query:       MMETSP1325-20131115|496_1  [L=424]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-10   41.5   0.0      5e-10   39.6   0.0    1.9  2  PF13640.1 2OG-Fe(II) oxygenase superfamily
     0.0026   17.2   0.2      0.007   15.8   0.0    1.8  2  PF13661.1 2OG-Fe(II) oxygenase superfamily
  ------ inclusion threshold ------
      0.041   13.7   0.0       0.45   10.4   0.0    2.2  1  PF05721.8 Phytanoyl-CoA dioxygenase (PhyH)


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.3   5.9e+03      13      28 ..     196     211 ..     187     227 .. 0.71
   2 !   39.6   0.0   1.1e-13     5e-10       3      89 ..     270     362 ..     268     372 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.3
  PF13640.1  13 spHvDnsesssrrltl 28 
                 +H+D+++ +  r tl
  MMETSP1325-20131115|496_1 196 AAHTDKRYRDCERTTL 211
                5799996655444444 PP

  == domain 2    score: 39.6 bits;  conditional E-value: 1.1e-13
  PF13640.1   3 lnrygpggflspHvDnse.........sssrrltlllylndpeweeeGGelelypsd.r......segvakevedeevvpkpgrlvlFksdrslHrvtpvgaq 89 
                 +ry++gg + pH+D+           +++  lt++lyl+     +eGGe+++ p++ +      +++v ++v+     p+pg +++F    +lH+ +pv ++
  MMETSP1325-20131115|496_1 270 TCRYREGGLFAPHHDGLLvmnpgggaaERRSFLTVMLYLT-GG--FEGGETVFLPEElKvnepwtKDDVIAQVR-----PEPGMCLVFWQ-ATLHAGAPV-SR 362
                579*************88*******98888889*******.55..6*********9866766666666666666.....***********.*********.33 PP

>> PF13661.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       1.9   8.9e+03      22      31 ..     193     202 ..     191     205 .. 0.76
   2 !   15.8   0.0   1.5e-06     0.007      16      66 ..     271     323 ..     264     327 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 1.9
  PF13661.1  22 dffdpHiDad 31 
                ++ ++H+D+ 
  MMETSP1325-20131115|496_1 193 EWRAAHTDKR 202
                5778999986 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 1.5e-06
  PF13661.1  16 tratrgdffdpHiDadpsql......gkprflsallYLNedwdadfdGgtlffddrd 66 
                 r++ g+ f+pH D             +++fl+++lYL+      f+Gg+++f++++
  MMETSP1325-20131115|496_1 271 CRYREGGLFAPHHDGLLVMNpgggaaERRSFLTVMLYLT----GGFEGGETVFLPEE 323
                579999999999996543335556***************....9999*****99875 PP

>> PF05721.8  Phytanoyl-CoA dioxygenase (PhyH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   9.8e-05      0.45       4     202 ..     167     359 ..     166     364 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 9.8e-05
                ---EEE-----HHHHHHHHHH---THHHHHT-------EE----B-----BS...GGTEEEE---HHH..........HHHHHHHHH----SEEE....EEEEE...E---S-----E.EEE-GGGTS-EE-......---EE-EEEESS-B-S----EEEE---------.......................-EEE----..............---- CS
  PF05721.8   4 dGylviegflsaeevealraeiealldralesgdkidfffeekaaadedgll...eksinkvghflhp..........rkvadlvrailgqdvyva.avlqsmyqd.ifkqpkiGgevqpwHqDstflptdp......eesvvgvwialedateenGclrfiPGSHkweegplrrrlpeddteaeddeakkedeeeavpvevkaGdavlfhgrllHgsga 202
                +G+ v +g+ls+ee+e+l  +++a  ++++++ +    +++ + ++  +++l    +s+ +++  l +          ++va+ + + lg +   + + ++ + ++  + + + Gg   ++H+D  ++  +p      ++s+++v+++l+    e G + f+P   k   +        +++++          + + +v  ++G +++f+ ++lH++++
  MMETSP1325-20131115|496_1 167 KGAFVYRGVLSPEECESLVTTLDA--ESEWRAAHTDKRYRDCERTTLFSDELaefVHSRLNFEATLPEelrnvtvtreKTVASGAIDELGTEG--RwRPHGLNNYWrTCRYRE-GGLF-APHHDGLLVM-NPgggaaeRRSFLTVMLYLTGG-FEGGETVFLPEELKV--N--------EPWTKD---------DVIAQVRPEPGMCLVFWQATLHAGAP 359
                589999*****************9..5777777777777777777777777733333333333333335665555444444444444444444..133444444456777774.8888.9999999997.4444444589999999999875.677777777776666..2........233333.........44555777777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.38s 00:00:01.12 Elapsed: 00:00:00.75
# Mc/sec: 1354.74
//
Query:       MMETSP1325-20131115|500_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.69
# Mc/sec: 361.19
//
Query:       MMETSP1325-20131115|493_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-22   79.0   0.6    2.3e-22   78.5   0.4    1.2  1  PF01287.15 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
    0.00031   20.4   0.0    0.00044   19.9   0.0    1.3  1  PF08207.7  Elongation factor P (EF-P) KOW-like domain
  ------ inclusion threshold ------
      0.011   15.1   0.1       0.02   14.3   0.1    1.4  1  PF00467.24 KOW motif


Domain annotation for each model (and alignments):
>> PF01287.15  Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.5   0.4     5e-26   2.3e-22       1      66 [.      85     153 ..      85     156 .. 0.91

  Alignments for each domain:
  == domain 1    score: 78.5 bits;  conditional E-value: 5e-26
  PF01287.15   1 iVkrkeyqLidis.dDgfvsLmdedgetkeDlklP..egelaeeikekfeegkevlVtvlsamGeekiv 66 
                 i++r+ey+L+di+ +D+f++Lm+e+get+eDlklP   +  +++i++kf+egk++++tvl+ mGee+++
   MMETSP1325-20131115|493_1  85 IITRTEYTLVDIDaEDSFLTLMTEEGETREDLKLPtyPEGYGDDIQAKFDEGKQLILTVLKSMGEEQVI 153
                 79**********84566******************65559***************************98 PP

>> PF08207.7  Elongation factor P (EF-P) KOW-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   9.7e-08   0.00044       2      33 ..      24      55 ..      23      71 .. 0.92

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 9.7e-08
               GGG-----EEE----EEEEEEEEEEE------ CS
  PF08207.7  2 asdfkkGlvieidgnpwrvvefehvkpGkgsA 33
               a +++kG +  i+g p++v e+ h+k Gk +A
  MMETSP1325-20131115|493_1 24 AGQIRKGGFMVIKGRPCKVNEVSHSKTGKHGA 55
               789**************************887 PP

>> PF00467.24  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   4.3e-06      0.02       2      26 ..      30      49 ..      29      59 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.3e-06
                TBEEEE-----TT-EEEEEEEETTT CS
  PF00467.24  2 GdyVrvisGpfkGrpGkvvevdrsk 26
                G+  ++     kGrp+kv ev+ sk
   MMETSP1325-20131115|493_1 30 GGFMVI-----KGRPCKVNEVSHSK 49
                666689.....************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.72
# Mc/sec: 532.52
//
Query:       MMETSP1325-20131115|502_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-08   32.2   6.4     0.0015   17.5   0.1    2.9  3  PF00036.27 EF hand
    6.1e-08   32.0   4.7     0.0019   17.6   0.2    2.5  2  PF13833.1  EF-hand domain pair
    4.5e-06   25.9   0.6      0.045   13.5   0.0    2.7  3  PF13405.1  EF-hand domain
    7.9e-06   25.8   1.9      0.039   13.9   0.2    2.3  2  PF13499.1  EF-hand domain pair
    0.00035   19.6   0.4      0.018   14.2   0.0    2.5  2  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.4   9.1e-07    0.0025       4      28 ..       2      26 ..       1      27 [. 0.92
   2 !   17.5   0.1   5.6e-07    0.0015       6      26 ..      45      65 ..      43      68 .. 0.92
   3 ?   -0.8   0.0      0.39   1.1e+03      15      27 ..      94     106 ..      92     108 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 9.1e-07
                HHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  4 eaFkefDkDgdGkIsfeEfkealkk 28
                +++ e+D + dG ++ +Ef+ ++++
   MMETSP1325-20131115|502_1  2 DMIWEVDENLDGCVDWDEFRLMFMR 26
                6999*****************9975 PP

  == domain 2    score: 17.5 bits;  conditional E-value: 5.6e-07
                HHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  6 FkefDkDgdGkIsfeEfkeal 26
                F +fD++ +Gk+s++E +++l
   MMETSP1325-20131115|502_1 45 FMIFDQNENGKVSVDETMKML 65
                99**************99998 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.39
                 SEBEHHHHHHHHH CS
  PF00036.27  15 GkIsfeEfkealk 27 
                 G I+f  ++ea++
   MMETSP1325-20131115|502_1  94 GEIDFFQYLEAVE 106
                 8999988888775 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.6   2.7e-06    0.0073      30      48 ..       3      21 ..       2      26 .. 0.90
   2 !   17.6   0.2   6.8e-07    0.0019      31      53 ..      45      67 ..      23      68 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.7e-06
  PF13833.1 30 lfrefDtdgdGkisfeEFc 48
               +++e+D + dG ++++EF 
  MMETSP1325-20131115|502_1  3 MIWEVDENLDGCVDWDEFR 21
               9*****************5 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 6.8e-07
  PF13833.1 31 frefDtdgdGkisfeEFcvller 53
               f  fD++ +Gk+s +E +++l++
  MMETSP1325-20131115|502_1 45 FMIFDQNENGKVSVDETMKMLYE 67
               789*****************986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.1   0.00021      0.56      10      27 ..       8      25 ..       6      34 .. 0.83
   2 !   13.5   0.0   1.7e-05     0.045       6      26 ..      45      65 ..      42      69 .. 0.91
   3 ?   -2.4   0.0       2.2     6e+03      15      21 ..      94     100 ..      92     107 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00021
               -------B---HHHHHHH CS
  PF13405.1 10 DkdgdGkidaeELrdaLr 27
               D + dG++d++E+r ++ 
  MMETSP1325-20131115|502_1  8 DENLDGCVDWDEFRLMFM 25
               8888*********98765 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 1.7e-05
               -GCC-------B---HHHHHH CS
  PF13405.1  6 FklfDkdgdGkidaeELrdaL 26
               F++fD++ +Gk++ +E +++L
  MMETSP1325-20131115|502_1 45 FMIFDQNENGKVSVDETMKML 65
               9***************88876 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 2.2
                --B---H CS
  PF13405.1  15 GkidaeE 21 
                G+id+ +
  MMETSP1325-20131115|502_1  94 GEIDFFQ 100
                7787654 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.2   1.4e-05     0.039      46      65 ..       4      23 ..       1      24 [. 0.86
   2 !   11.6   0.1   7.9e-05      0.22       6      65 ..      45      64 ..      27     105 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.4e-05
  PF13499.1 46 fkelDkngdGvlsfeEflqa 65
               + e+D+n dG+++++Ef+ +
  MMETSP1325-20131115|502_1  4 IWEVDENLDGCVDWDEFRLM 23
               6789*************865 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 7.9e-05
  PF13499.1  6 FkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65
               F  +                                        D n +G++s +E +++
  MMETSP1325-20131115|502_1 45 FMIF----------------------------------------DQNENGKVSVDETMKM 64
               4445........................................5555555555555544 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1      0.02        55       8      23 ..       7      22 ..       6      25 .. 0.81
   2 !   14.2   0.0   6.6e-06     0.018       3      23 ..      44      63 ..      42      65 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.02
               H--S----B-HHHHHH CS
  PF13202.1  8 fDlNgDGkIsreELkr 23
               +D N DG ++ +E++ 
  MMETSP1325-20131115|502_1  7 VDENLDGCVDWDEFRL 22
               57777999******97 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 6.6e-06
               HHHHHH--S----B-HHHHHH CS
  PF13202.1  3 dtFrafDlNgDGkIsreELkr 23
               + F  fD N  Gk+s +E ++
  MMETSP1325-20131115|502_1 44 Q-FMIFDQNENGKVSVDETMK 63
               5.99**************766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.63
# Mc/sec: 486.88
//
Query:       MMETSP1325-20131115|503_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-15   55.5   0.0    1.2e-14   54.3   0.0    1.7  1  PF02797.10 Chalcone and stilbene synthases, C-terminal domain
    2.8e-13   49.5   0.0    4.5e-13   48.8   0.0    1.3  1  PF08541.5  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
  ------ inclusion threshold ------
       0.13   12.0   0.1       0.23   11.3   0.0    1.3  1  PF01325.14 Iron dependent repressor, N-terminal DNA binding domain


Domain annotation for each model (and alignments):
>> PF02797.10  Chalcone and stilbene synthases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.0   2.6e-18   1.2e-14      63     142 ..      63     135 ..      12     143 .. 0.82

  Alignments for each domain:
  == domain 1    score: 54.3 bits;  conditional E-value: 2.6e-18
                 -EE-----HHHHHHHHHCT--TTTTHHHHHHHHH----GGGHHHHHHHHHHHHHHH----B---------EE------EE CS
  PF02797.10  63 WiahpGGpaildqveakleLkpeklkasrevlseyGnlssacvlfildelrkkslkegkkttgeGlewGvllgfGPGltv 142
                 + +h+GG+a++d v ++l+L++++l+ sr+ l +yGn ss+++++ ld++rk+  +   ++        + l+fG G+  
   MMETSP1325-20131115|503_1  63 FCIHAGGRAVVDGVGQNLKLNDNQLEPSRHTLYHYGNTSSSSIWYELDHIRKSMNQRRGHR-------VLQLAFGSGFKC 135
                 578************************************************9444433333.......356666666655 PP

>> PF08541.5  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0     1e-16   4.5e-13      10      88 ..      59     140 ..      57     142 .. 0.93

  Alignments for each domain:
  == domain 1    score: 48.8 bits;  conditional E-value: 1e-16
                --SEEEE--S-HHHHHHHHHH----TT...EE--GGGT----TTHHHHHHHHHHHC---------EEEE-----------EE CS
  PF08541.5  10 didwfvphqanlriidavakrlglpee...kvvvnldeyGntsaasiplaLdeaveegklkpgdlvllvgfGaGlswgaavl 88 
                 id+f++h   + ++d v ++l+l+++       +l +yGnts++si   Ld+ +++ + ++g++vl ++fG G+ + +av+
  MMETSP1325-20131115|503_1  59 GIDHFCIHAGGRAVVDGVGQNLKLNDNqlePSRHTLYHYGNTSSSSIWYELDHIRKSMNQRRGHRVLQLAFGSGFKCNSAVW 140
                59**********************998454567899*******************************************997 PP

>> PF01325.14  Iron dependent repressor, N-terminal DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0     5e-05      0.23      28      47 ..      11      30 ..       6      33 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 5e-05
                HHHHCTS-HHHHHHHHHHHH CS
  PF01325.14 28 lAerLnvspstVsemlkkLe 47
                ++e+L+v++stV   ++k+ 
   MMETSP1325-20131115|503_1 11 ISEILKVAKSTVARPVSKML 30
                9************9999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.32s 00:00:00.79 Elapsed: 00:00:00.63
# Mc/sec: 608.60
//
Query:       MMETSP1325-20131115|504_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 907.19
//
Query:       MMETSP1325-20131115|506_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-11   40.7   5.0      1e-10   40.6   3.5    1.0  1  PF00999.16 Sodium/hydrogen exchanger family
    0.00012   21.5   1.3    0.00012   21.5   0.9    1.8  2  PF06826.7  Predicted Permease Membrane Region


Domain annotation for each model (and alignments):
>> PF00999.16  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   3.5   1.5e-14     1e-10     181     288 ..      12     123 ..       4     124 .] 0.88

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 1.5e-14
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX...XXXXXXXXXXXXXXXX.... CS
  PF00999.16 181 liliflvvalgglllglviglllrlltkft.sgdrelevllvlllallaallaevlglsgilgaflaGlvlseyefsnelseklepfgk...flfeplfFvlvGlsldlkvl 288
                 ++l + +v +++l+ + ++++l +++++   ++  el +l+++  +l++all+e++ ls  +ga+laGl+  +   ++ l +++e + +   +lf +++ +++G+ + ++++
   MMETSP1325-20131115|506_1  12 VVLDVCYVTFIVLVSRTFLPFLIKRVIRNVrRNKMELMTLAIVSYSLGMALLSEWVSLSYGFGALLAGLIWGRIGVDQALMTRAEEVVQtlsSLFGSIYSASLGMIVSPEFI 123
                 6788999**********************99*****************************************77777776666444444444**************998876 PP

>> PF06826.7  Predicted Permease Membrane Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.07   4.8e+02      82     110 ..      12      40 ..       4      46 .. 0.76
   2 !   21.5   0.9   1.7e-08   0.00012       5      76 ..      51     123 ..      47     124 .] 0.92

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.07
  PF06826.7  82 dGlklvllallitvvplllalvlaklvlk 110
                  l + +++++++v+ ++l +++ +++ +
  MMETSP1325-20131115|506_1  12 VVLDVCYVTFIVLVSRTFLPFLIKRVIRN 40 
                55778889999999999999999887655 PP

  == domain 2    score: 21.5 bits;  conditional E-value: 1.7e-08
  PF06826.7   5 vlalGlllGsikikvglsLGvaggvLivglllGqlgkkgplv.ldisalsllrelgLalFlaavGlsaGpgff 76 
                 +++++ lG+  ++  +sL+ + g+L++gl+ G++g  ++l+   +++ ++l++l+ +++ a +G+ + p+f+
  MMETSP1325-20131115|506_1  51 LAIVSYSLGMALLSEWVSLSYGFGALLAGLIWGRIGVDQALMtRAEEVVQTLSSLFGSIYSASLGMIVSPEFI 123
                567899999999999999999999************99999999999************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       608  (0.0444705); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.42s 00:00:00.89 Elapsed: 00:00:00.69
# Mc/sec: 430.65
//
Query:       MMETSP1325-20131115|499_1  [L=558]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-58  196.0  21.7    3.3e-50  170.9   8.1    3.2  2  PF03348.10 Serine incorporator (Serinc)


Domain annotation for each model (and alignments):
>> PF03348.10  Serine incorporator (Serinc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   1.6     2e-10   2.7e-06       2     134 ..      24     165 ..      23     173 .. 0.72
   2 !  170.9   8.1   2.4e-54   3.3e-50     138     429 .]     218     557 ..     211     557 .. 0.74

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 2e-10
  PF03348.10   2 cccgs..aacsllcsacksl........lksstatrlayalllllnslvslimlspgvekklkkkilkfi...kvdCekse.....lvgysaVyRvsfalalfflllallllgvksskdpraaiqngfWflKilllivlivlaffiPneff 134
                 cc++s  ++c  +c++c +              a r+   l+l++ sl+ +i+ + ++ + +++ i++     + +C++++     + +y a  Rvsf  a+ff+++a++             i++  W +K + +i ++++++++Pn + 
   MMETSP1325-20131115|499_1  24 CCFCSslSCCVRICRCCCGGggedgkgtGYPENAGRIGS-LILMMLSLLVAIAGQYWYYDYMTD-IPGAEdawTDNCDDDSsryprCREYAATERVSFCAACFFAFMAMVSG-------FMPPIHDHGWDIKAIGYISFLIATIWMPNCKW 165
                 666654567777887775441111101123345567764.555555566667777788888888.77766777789*855458999*******************9997654.......7889*************************544 PP

  == domain 2    score: 170.9 bits;  conditional E-value: 2.4e-54
  PF03348.10 138 wkyvsviggflFiliqliLlvdfahsWaeswvekveeens..klwkaaLlivtllmYllslvltvllyvfftsdgCslnkffisinlilcvivsivsilpkvqeanPksgLlqasvvtlYitYltwsAlssepdkecnplknksegtrkasliigllltflavl...Ystlraasnsssgklklsed......kveeqkkeernesreeaakaaveegsepksa......................................kddekegvkysYslFHiilflaslYvamlLT...........................nwfspeeele..tvgstwaavwvkiisswvclllYiwtlvAPlllpdrdF 429
                 + +++ +g+f+ i++q i+lvdfa++++++ ++ + ++       ++aLl+  l+ ++++++++vl++vf+t +gC+  ++f+s++li++vi+++++i     + +    Ll +svv++YitYlt+ A+ss+p+ +cnp    s+  + +s+++gl++tf++++   Y++ r+ +n  +g ++ s+        + ++++++ ne++ ++a + ++                                              +                 + +a + +am LT                           +w + +++++  + +++++a+w+ i++sw+c+llY wtlvAP ++pdrdF
   MMETSP1325-20131115|499_1 218 YVWFARVGSFFMIVLQQIILVDFAYTLNDKLYNMAGDTVDdwGSGHYALLGLCLTNFAVAITGIVLMFVFYT-SGCDDSTTFVSLTLIFIVILTALQITS---DPEHGHNLLVTSVVAVYITYLTYVAVSSNPNGDCNPN--YSDDETALSVVLGLAITFVSICgtvYFSSRSMTNLMDGDVEQSKRsqlnavLTGSASSDAANEEAPANAASVNS-------SgdpntgaaagadaeqaaadsvayaagwkaamndgghamR-----------------FNIAMMLIAMKLThmfhaqrtivnlspdctsrrywcmvltDWGNVDRSASgaSPTNGKIAMWMNITASWICTLLYGWTLVAPRVFPDRDF 557
                 789****************************9999976542255689*************************.**************************9...4444456*****************************9..477888999*********99754449999999999966666666644444322222222222222222222222.......1222333567777755555555555555444333333330.................555555555555555555555666667777777777777799999555443367777********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       742  (0.0542715); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.91u 0.39s 00:00:01.30 Elapsed: 00:00:00.79
# Mc/sec: 1692.62
//
Query:       MMETSP1325-20131115|509_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.61
# Mc/sec: 420.34
//
Query:       MMETSP1325-20131115|505_1  [L=352]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.042   13.0   2.8      0.093   11.9   2.0    1.5  1  PF05308.6  Mitochondrial fission regulator
       0.58    9.2   3.7        0.4    9.7   1.3    1.7  2  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.0   1.4e-05     0.093     172     208 ..     160     196 ..     132     216 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.4e-05
  PF05308.6 172 tasvvisdpteepelevp.pppppPpPlpavslqqsas 208
                +++  + dp   p+l++p  ppppPpP p++ lq+ a 
  MMETSP1325-20131115|505_1 160 AGGEYMRDP-LSPNLVSPnVPPPPPPPTPPPGLQEAAV 196
                444444444.5566666667888889999999998765 PP

>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.3   5.9e-05       0.4     228     249 ..     174     198 ..     127     221 .. 0.68
   2 ?   -2.8   0.0       0.4   2.7e+03     215     269 ..     258     314 ..     245     323 .. 0.48

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 5.9e-05
                 XXXXXXXXXXXXXXX.......... CS
  PF01213.14 228 sktaaPppPpppppP...svdtikd 249
                  ++++PppPppp+pP   +   +++
   MMETSP1325-20131115|505_1 174 VSPNVPPPPPPPTPPpglQEAAVQH 198
                 3455666665555552333333333 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.4
                 .--CSC--XXXXXXXXXXXXXX.....XXXXXX........XXXXXX...XXXXXXXXXX CS
  PF01213.14 215 aaaaksalaavsasktaaPppP.....pppppPsvdtikdsvesaksdskgslgavFael 269
                    ++sa+++ s+s t    +        p  Ps+d+ +++  +++s  + ++ga   +l
   MMETSP1325-20131115|505_1 258 GLRDVSAMSSSSTSFTIPG-AHgtdvmGLPHLPSQDVRQRDRRPSQS--HSNVGAFLENL 314
                 4556666655555444322.112222234444555555555554444..55556655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.57
# Mc/sec: 1454.34
//
Query:       MMETSP1325-20131115|510_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-07   30.4   0.0    2.3e-07   30.3   0.0    1.0  1  PF00134.18 Cyclin, N-terminal domain
  ------ inclusion threshold ------
      0.043   13.5   0.0      0.095   12.4   0.0    1.5  2  PF00382.14 Transcription factor TFIIB repeat


Domain annotation for each model (and alignments):
>> PF00134.18  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   3.3e-11   2.3e-07      38     102 ..      11      77 ..       3      80 .] 0.90

  Alignments for each domain:
  == domain 1    score: 30.3 bits;  conditional E-value: 3.3e-11
                 HHHHHHCTT--CCCHHHHHHHHHHHHCC-....--CCCCTT---HHHHHHHCCC-SS---CHHHHCHT CS
  PF00134.18  38 lvevsekfklspetlylavnyldRflskr.s..vkrkklqlvgvtcLllAaKveeirppeledlvyit 102
                 l++ + +++l  e  ++++++++   +++ +   + ++l+l  +tcL+lAaK+ee  p++l+d++ ++
   MMETSP1325-20131115|510_1  11 LFRAGYRLRLPCEATAVSIKIFHEWAKEEdIaaLPVDELNLAITTCLFLAAKLEES-PRRLRDVINVS 77 
                 677888999999***************996588999********************.9*****99876 PP

>> PF00382.14  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.67   4.6e+03      10      26 ..      20      36 ..      15      41 .. 0.57
   2 ?   12.4   0.0   1.4e-05     0.095      40      65 ..      53      78 ..      49      78 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.67
                --HHHHTHHHHHHHHHS CS
  PF00382.14 10 LpkkVadaAkelaklal 26
                Lp + +    +++++ +
   MMETSP1325-20131115|510_1 20 LPCEATAVSIKIFHEWA 36
                55555555556666555 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 1.4e-05
                HTTTTT---TTTTSS--HHHHHHSSS CS
  PF00382.14 40 aAAclyiAcrleevkrtlkeiasvaq 65
                + +cl++A++lee +r l+++ +v++
   MMETSP1325-20131115|510_1 53 ITTCLFLAAKLEESPRRLRDVINVSH 78
                579*******************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.70
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|513_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0016   17.5   0.2      0.011   14.9   0.0    2.2  2  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.025   13.7   0.0      0.082   12.1   0.0    1.9  2  PF00036.27 EF hand
      0.037   13.6   0.4      0.067   12.8   0.3    1.5  1  PF00404.13 Dockerin type I repeat


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.4e-06     0.011       6      20 ..       9      23 ..       6      26 .. 0.86
   2 ?   -0.6   0.0      0.18   8.4e+02       4      11 ..     216     223 ..     213     224 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 2.4e-06
               HHH--S----B-HHH CS
  PF13202.1  6 rafDlNgDGkIsreE 20
                a+D+NgDG++++++
  MMETSP1325-20131115|513_1  9 MALDVNGDGRVDFQD 23
               689**********96 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.18
                HHHHH--S CS
  PF13202.1   4 tFrafDlN 11 
                +F+++Dl+
  MMETSP1325-20131115|513_1 216 LFSRADLD 223
                7*****99 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.8e-05     0.082       8      21 ..      10      23 ..       4      30 .. 0.85
   2 ?   -2.9   0.0       1.1   5.2e+03       5      12 ..     216     223 ..     214     224 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.8e-05
                HHCTTTSSEBEHHH CS
  PF00036.27  8 efDkDgdGkIsfeE 21
                 +D++gdG+++f++
   MMETSP1325-20131115|513_1 10 ALDVNGDGRVDFQD 23
                68**********97 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.1
                 HHHHHCTT CS
  PF00036.27   5 aFkefDkD 12 
                 +F+ +D D
   MMETSP1325-20131115|513_1 216 LFSRADLD 223
                 79999999 PP

>> PF00404.13  Dockerin type I repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   1.5e-05     0.067       1      13 [.      12      24 ..      12      26 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.5e-05
                -TT-SS--SHHHH CS
  PF00404.13  1 DVNgDGkVnalDl 13
                DVNgDG+V+  D+
   MMETSP1325-20131115|513_1 12 DVNGDGRVDFQDA 24
                9*******96666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       587  (0.0429345); expected 273.4 (0.02)
Passed bias filter:                      442  (0.0323288); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.73
# Mc/sec: 853.50
//
Query:       MMETSP1325-20131115|515_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-43  144.7   9.4    9.7e-24   83.3   1.5    2.2  2  PF00505.14 HMG (high mobility group) box
    1.3e-28   99.1  11.7    7.3e-17   61.4   1.6    2.2  2  PF09011.5  Domain of unknown function (DUF1898)
    5.6e-09   35.4   0.0     0.0037   16.7   0.0    2.2  2  PF08073.7  CHDNT (NUC034) domain
    0.00028   20.9   3.1        0.5   10.4   0.1    2.9  3  PF06244.7  Protein of unknown function (DUF1014)
    0.00031   20.9   3.5     0.0023   18.0   0.3    2.3  2  PF04690.8  YABBY protein
     0.0051   16.2   0.9       0.69    9.3   0.2    2.4  2  PF05494.7  Toluene tolerance, Ttg2
  ------ inclusion threshold ------
       0.11   12.2   6.8       0.17   11.7   4.7    1.3  1  PF12298.3  Eukaryotic mitochondrial regulator protein
       0.38   11.1  12.2       0.15   12.4   3.2    2.2  2  PF11740.3  Plasmid replication region DNA-binding N-term


Domain annotation for each model (and alignments):
>> PF00505.14  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.6   1.5e-21   2.5e-18       1      68 [.      16      83 ..      16      84 .. 0.97
   2 !   83.3   1.5   5.7e-27   9.7e-24       1      68 [.     104     171 ..     104     172 .. 0.99

  Alignments for each domain:
  == domain 1    score: 65.9 bits;  conditional E-value: 1.5e-21
                ---S--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHTTTTS-HCCHHHHHHHHHHHHHHHHHHHGGG CS
  PF00505.14  1 pkRplsaFflfskeqraklkaenPdlkvaeiskklgekWkelseeeKkpYeekaekekeeyekekpeY 68
                p R +sa+ l++++ r++l a nP+++  +isk lg++Wke  e++K+++++k+e++k++++ke++ Y
   MMETSP1325-20131115|515_1 16 PTRVRSAYQLWANDTRPELQAANPNASMGDISKLLGARWKETDEAVKSEWQRKSEEDKARFNKEMETY 83
                56889************************************************************998 PP

  == domain 2    score: 83.3 bits;  conditional E-value: 5.7e-27
                 ---S--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHTTTTS-HCCHHHHHHHHHHHHHHHHHHHGGG CS
  PF00505.14   1 pkRplsaFflfskeqraklkaenPdlkvaeiskklgekWkelseeeKkpYeekaekekeeyekekpeY 68 
                 pkR+++a+f+f+ e r++ kae P+++v+e+sk +g+kWk+lsee+K+pYe+kae++k++y +ek++Y
   MMETSP1325-20131115|515_1 104 PKRATTAYFFFLAEERPRTKAEVPGISVTELSKVVGAKWKQLSEEQKAPYEAKAEADKARYAAEKAQY 171
                 8******************************************************************9 PP

>> PF09011.5  Domain of unknown function (DUF1898)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   1.5   2.6e-14   4.4e-11       1      70 []      13      80 ..      13      80 .. 0.97
   2 !   61.4   1.6   4.3e-20   7.3e-17       1      69 [.     101     167 ..     101     168 .. 0.97

  Alignments for each domain:
  == domain 1    score: 42.9 bits;  conditional E-value: 2.6e-14
  PF09011.5  1 pkkpkrkrnAYflFvqtmrpelkregpqvpvglaevsklcsekWkalseeeKekYeekAkedkkrydrea 70
               pk p r r+AY l++ + rpel++ +p+ +  ++++skl++++Wk+  e+ K+++++k  edk+r+++e+
  MMETSP1325-20131115|515_1 13 PKAPTRVRSAYQLWANDTRPELQAANPNAS--MGDISKLLGARWKETDEAVKSEWQRKSEEDKARFNKEM 80
               6778899**********************6..*************************************8 PP

  == domain 2    score: 61.4 bits;  conditional E-value: 4.3e-20
  PF09011.5   1 pkkpkrkrnAYflFvqtmrpelkregpqvpvglaevsklcsekWkalseeeKekYeekAkedkkrydre 69 
                p+ pkr++ AYf+F+ + rp  k+e p ++  + e sk +++kWk+lsee+K +Ye kA +dk+ry +e
  MMETSP1325-20131115|515_1 101 PNAPKRATTAYFFFLAEERPRTKAEVPGIS--VTELSKVVGAKWKQLSEEQKAPYEAKAEADKARYAAE 167
                899**************************6..**********************************998 PP

>> PF08073.7  CHDNT (NUC034) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   2.2e-06    0.0037      19      49 ..      26      56 ..      20      61 .. 0.87
   2 !   16.6   0.0   2.4e-06    0.0042      15      52 ..     110     147 ..     106     150 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 2.2e-06
  PF08073.7 19 FsslvrPlilkeNPkiavsKlmmllaaKwrE 49
               + +  rP ++++NP   +  +  ll+a+w+E
  MMETSP1325-20131115|515_1 26 WANDTRPELQAANPNASMGDISKLLGARWKE 56
               55667*************************9 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 2.4e-06
  PF08073.7  15 nyKaFsslvrPlilkeNPkiavsKlmmllaaKwrEFsd 52 
                 y  F    rP   +e P+i v+ l  +++aKw+  s+
  MMETSP1325-20131115|515_1 110 AYFFFLAEERPRTKAEVPGISVTELSKVVGAKWKQLSE 147
                56667777799***********************8876 PP

>> PF06244.7  Protein of unknown function (DUF1014)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00041      0.71      68     114 ..      11      57 ..       2      62 .. 0.85
   2 !   10.4   0.1   0.00029       0.5      67     114 ..      98     145 ..      90     151 .. 0.87
   3 ?   -1.1   0.1       1.1   1.8e+03      19      30 ..     156     167 ..     143     187 .. 0.39

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00041
  PF06244.7  68 vdrhpekrlkAaykayeeenLPrlkeekpnlrlsQykqllwKefkks 114
                +d +   r++ ay+ + +   P+l++ +pn  +    +ll  ++k  
  MMETSP1325-20131115|515_1  11 KDPKAPTRVRSAYQLWANDTRPELQAANPNASMGDISKLLGARWKET 57 
                55556679***************************999999999865 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00029
  PF06244.7  67 evdrhpekrlkAaykayeeenLPrlkeekpnlrlsQykqllwKefkks 114
                 +d +  kr   ay  +  e+ Pr k+e p++ ++ + +++  ++k+ 
  MMETSP1325-20131115|515_1  98 AKDPNAPKRATTAYFFFLAEERPRTKAEVPGISVTELSKVVGAKWKQL 145
                56777789*********************************9999975 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 1.1
  PF06244.7  19 eekkkkkkanve 30 
                ++++ k + + e
  MMETSP1325-20131115|515_1 156 KAEADKARYAAE 167
                222222222221 PP

>> PF04690.8  YABBY protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.026        45     115     148 ..       9      42 ..       2      55 .. 0.87
   2 !   18.0   0.3   1.3e-06    0.0023      72     160 ..      55     142 ..      41     151 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.026
  PF04690.8 115 virPPekrqrvPsaynrfikeeiqrikasnPdis 148
                 ++ P    rv say  +  +    ++a+nP+ s
  MMETSP1325-20131115|515_1   9 KVKDPKAPTRVRSAYQLWANDTRPELQAANPNAS 42 
                578899999*************99*******987 PP

  == domain 2    score: 18.0 bits;  conditional E-value: 1.3e-06
  PF04690.8  72 leelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160
                +e+++  +++++ + e++++  +++  + ++ + + + ++ ++  + P+  +r+ +ay  f+ ee  r ka+ P is  e   +    W
  MMETSP1325-20131115|515_1  55 KETDEAVKSEWQRKSEEDKARFNKEMETYVPPEGQGKGKK-QKKAKDPNAPKRATTAYFFFLAEERPRTKAEVPGISVTELSKVVGAKW 142
                5555666666666666655555555555555555555554.5568999*****************************999766666666 PP

>> PF05494.7  Toluene tolerance, Ttg2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0057       9.7      49      70 ..      62      83 ..      40      85 .. 0.86
   2 !    9.3   0.2    0.0004      0.69      46      83 ..     136     172 ..      96     193 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0057
  PF05494.7 49 GkkwrkaspeqraeFteafrel 70
                ++w++ s+e++a+F ++++++
  MMETSP1325-20131115|515_1 62 KSEWQRKSEEDKARFNKEMETY 83
               3359***************998 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0004
  PF05494.7  46 lvlGkkwrkaspeqraeFteafrellvrtYakalteys 83 
                +v+G kw+++s+eq+a +    +    + Ya + ++y+
  MMETSP1325-20131115|515_1 136 KVVGAKWKQLSEEQKAPYEAKAEAD-KARYAAEKAQYD 172
                799*99*********9997765543.444555555555 PP

>> PF12298.3  Eukaryotic mitochondrial regulator protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.7   9.8e-05      0.17      59     166 ..      61     172 ..      59     183 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.8e-05
  PF12298.3  59 lekkwknkgkpllkkysramekmlPlnagekkakeenlndipvpsktaqsrflpvsesepFtpvdaakv..lel..epaaetlekaeevkaekesaqeveeeeakkkkvvlk 166
                ++++w++k +++  ++++ me  +P + + k +k+   +d   p+++ +  f  ++e +p t+++   +   el     a++ +  ee+ka+ e+++e+++++  ++k+ ++
  MMETSP1325-20131115|515_1  61 VKSEWQRKSEEDKARFNKEMETYVPPEGQGKGKKQKKAKDPNAPKRATTAYFFFLAEERPRTKAEVPGIsvTELskVVGAKWKQLSEEQKAPYEAKAEADKARYAAEKAQYD 172
                789***********************888888888889999*********************99975441144422333455555555566666666655555444554444 PP

>> PF11740.3  Plasmid replication region DNA-binding N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.6     0.057        97      35      92 ..      17      75 ..      15      83 .. 0.54
   2 ?   12.4   3.2   8.7e-05      0.15      49     116 ..     119     182 ..     103     185 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.057
  PF11740.3 35 stisrvlkewreeqraaaesaapelP.ealsealaelvaalwqaaqeeaeerlaaarae 92
               +++ ++ + w ++ r ++++a p++   ++s+ l++ +++  +a++ e +++ ++++a+
  MMETSP1325-20131115|515_1 17 TRVRSAYQLWANDTRPELQAANPNASmGDISKLLGARWKETDEAVKSEWQRKSEEDKAR 75
               66666677777777777744444433345555555555555555555555555555554 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 8.7e-05
  PF11740.3  49 raaaesaapelPealsealaelvaalwqaaqeeaeerlaaaraeaeaeraaleaelaeaaarvealee 116
                r +   +++e+P    ++l+++v+a w+++ ee+ + ++a +aea+ +r a+e+++ +a +  +a+ee
  MMETSP1325-20131115|515_1 119 RPR---TKAEVPGISVTELSKVVGAKWKQLSEEQKAPYEA-KAEADKARYAAEKAQYDANQSSAAAEE 182
                333...368899999999999********99999998875.567777777777777777777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       916  (0.0669982); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.71
# Mc/sec: 664.90
//
Query:       MMETSP1325-20131115|516_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0002   21.5   0.0     0.0002   21.5   0.0    1.0  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.4e-08    0.0002      13      55 ..       5      48 ..       1      59 [. 0.84

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 1.4e-08
  PF00160.16 13 vieLfedkaPktvenFlklakegfYdgt.kfhrvikgfmiqgGd 55
                 ie+ ++ +P  +++Fl+l+ +gf+  t   +r ++ f++q+G 
   MMETSP1325-20131115|516_1  5 LIEVVPTWSPLGARRFLELVDSGFFSSTvALFRAVPHFIAQFGI 48
                6999*********************9652689*********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.83
# Mc/sec: 173.23
//
Query:       MMETSP1325-20131115|508_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.4   0.1      0.022   14.9   0.0    1.3  1  PF09821.4 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit


Domain annotation for each model (and alignments):
>> PF09821.4  ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.6e-06     0.022      32      98 ..      49     115 ..      46     116 .] 0.92

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.6e-06
  PF09821.4  32 GdielTeeGrrfveadikerKelfaeqLlkivplaahirrvldereshelpeerfleeledylspee 98 
                G + + + G ++ +++  +r + f++q ++ v++a+++   l++ +++ ++ +    +le+  s+e+
  MMETSP1325-20131115|508_1  49 GWVAVVKDGAELFRSEDFQRNRKFRQQRENAVAIAEAVLAALEDAPEEPVKDAPASAALERADSAEA 115
                77889999*************************************************9999877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       528  (0.0386191); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.67
# Mc/sec: 414.89
//
Query:       MMETSP1325-20131115|517_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.1   0.9       0.43   10.4   0.6    1.8  1  PF13246.1 Putative hydrolase of sodium-potassium ATPase alpha subunit


Domain annotation for each model (and alignments):
>> PF13246.1  Putative hydrolase of sodium-potassium ATPase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.6   3.1e-05      0.43      40      68 ..      58      95 ..       8     105 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 3.1e-05
  PF13246.1 40 d.........veelreeykkvaelpFnserKrmsvvhk 68
               +         +++  ++ k+v+   F+se  rmsvv+ 
  MMETSP1325-20131115|517_1 58 KlikgqkarsSSSPVTQVKIVHRHHFSSELQRMSVVVD 95
               044444444466677899******************74 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       734  (0.0536864); expected 273.4 (0.02)
Passed bias filter:                      494  (0.0361322); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.71
# Mc/sec: 364.52
//
Query:       MMETSP1325-20131115|518_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-08   31.5   0.0    1.4e-07   31.0   0.0    1.3  1  PF00270.24 DEAD/DEAH box helicase
      0.004   16.3   0.0     0.0054   15.8   0.0    1.2  1  PF02889.11 Sec63 Brl domain
  ------ inclusion threshold ------
      0.012   15.3   0.0      0.022   14.4   0.0    1.5  2  PF04851.10 Type III restriction enzyme, res subunit
      0.017   14.2   0.0      0.023   13.8   0.0    1.2  1  PF02562.11 PhoH-like protein
      0.026   13.2   0.0      0.031   13.0   0.0    1.1  1  PF00437.15 Type II/IV secretion system protein
      0.052   12.7   0.0      0.065   12.4   0.0    1.1  1  PF00580.16 UvrD/REP helicase N-terminal domain
       0.11   11.9   0.0       0.15   11.3   0.0    1.2  1  PF00158.21 Sigma-54 interaction domain


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   7.2e-11   1.4e-07       2      42 ..      71     112 ..      70     125 .. 0.88

  Alignments for each domain:
  == domain 1    score: 31.0 bits;  conditional E-value: 7.2e-11
                 HHHHHHHHHHH.SS-EEEEEC-TT---HHHHHHHHHHHHHH. CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00270.24   2 piQaeaiplil.gggdvlvaaeTGsGKTlaflipvlqillet 42 
                 p+Q + +++++ ++++vlv a+TGsGKTl++ + +l++l + 
   MMETSP1325-20131115|518_1  71 PVQTQLFHTLYhTDRNVLVGAPTGSGKTLIAELSMLRMLNRR 112
                 89******999779**********************999765 PP

>> PF02889.11  Sec63 Brl domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.8e-06    0.0054     290     315 .]       2      27 ..       1      27 [. 0.93

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.8e-06
  PF02889.11 290 pkpknltirlvsdkwlgldkevavsl 315
                 p p++++++++sd+w+g+d+ +avs+
   MMETSP1325-20131115|518_1   2 PLPPQYFVHVLSDRWVGMDEVHAVSF 27 
                 788********************987 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.3   2.6e+03     152     162 ..      19      29 ..      17      53 .. 0.79
   2 ?   14.4   0.0   1.1e-05     0.022      13      43 ..      78     102 ..      55     114 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 1.3
  PF04851.10 152 iDEaHrlsakk 162
                 +DE+H +s k+
   MMETSP1325-20131115|518_1  19 MDEVHAVSFKH 29 
                 69999888776 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.1e-05
  PF04851.10  13 enllesiekedekkrglivmaTGtGKTlvaa 43 
                   l       ++ +++l+ ++TG+GKTl+a 
   MMETSP1325-20131115|518_1  78 HTLY------HTDRNVLVGAPTGSGKTLIAE 102
                 3333......45688*************986 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.2e-05     0.023       6      46 ..      70     111 ..      65     114 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.2e-05
  PF02562.11   6 tkeQkeylealk.kndivfaiGpaGtGKTylavalavealkk 46 
                 +  Q +++++l  +   v++ +p+G+GKT++a    +++l++
   MMETSP1325-20131115|518_1  70 NPVQTQLFHTLYhTDRNVLVGAPTGSGKTLIAELSMLRMLNR 111
                 6678999988884566888889**********8888877765 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.6e-05     0.031     118     152 ..      74     109 ..      46     114 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.6e-05
  PF00437.15 118 aevlrqavqargnilvsGgTgsGKttlln.allaei 152
                  ++ ++  ++ +n+lv  +TgsGKt +++ ++l  +
   MMETSP1325-20131115|518_1  74 TQLFHTLYHTDRNVLVGAPTGSGKTLIAElSMLRML 109
                 344444445599*************98851444444 PP

>> PF00580.16  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.3e-05     0.065       8      44 ..      79     114 ..      70     117 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.3e-05
                 HHHS-SS-EEEE-------HHHHHHHHHHHHHTT--- CS
  PF00580.16   8 aiaslggpilveAsAGsGKTfvlaerilrlikeeeie 44 
                  + ++  ++lv A  GsGKT + +  +lr+++ +  e
   MMETSP1325-20131115|518_1  79 TLYHTDRNVLVGAPTGSGKTLIAELSMLRMLNRR-AE 114
                 4556899*********************999987.55 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.7e-05      0.15      13      42 ..      75     104 ..      66     116 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 7.7e-05
                 HHHHHHTTS-S-EEEE-------HHHHHHH CS
  PF00158.21  13 eqikkvaktdltvlitGesGtGKellArai 42 
                 +  +++ +td +vl+   +G+GK+l+A++ 
   MMETSP1325-20131115|518_1  75 QLFHTLYHTDRNVLVGAPTGSGKTLIAELS 104
                 5567788999*****************963 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 548.98
//
Query:       MMETSP1325-20131115|514_1  [L=681]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-71  238.3   0.0    1.1e-70  237.6   0.0    1.3  1  PF00069.20 Protein kinase domain
    1.5e-35  122.4   0.0    2.8e-35  121.5   0.0    1.4  1  PF07714.12 Protein tyrosine kinase
    4.3e-19   66.1   5.3    1.4e-05   23.9   0.0    4.7  4  PF00036.27 EF hand
    3.4e-18   63.6   1.2    4.2e-05   22.9   0.0    4.7  4  PF13405.1  EF-hand domain
    3.9e-17   62.0   1.8    2.9e-07   30.4   0.4    3.0  2  PF13499.1  EF-hand domain pair
      7e-14   51.0   5.3     0.0017   17.8   0.0    4.5  4  PF13833.1  EF-hand domain pair
    2.2e-08   32.9   0.1      9e-06   24.6   0.0    3.6  4  PF13202.1  EF hand
    6.4e-06   25.9   0.1    3.9e-05   23.3   0.0    2.0  2  PF01636.18 Phosphotransferase enzyme family
    0.00015   21.0   0.2    0.00039   19.7   0.0    1.7  2  PF01163.17 RIO1 family
    0.00026   20.9   0.0    0.00054   19.9   0.0    1.5  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)
    0.00062   18.7   0.0     0.0015   17.5   0.0    1.6  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0093   15.4   0.0       0.02   14.3   0.0    1.5  1  PF01633.15 Choline/ethanolamine kinase
  ------ inclusion threshold ------
      0.038   13.2   0.0      0.091   11.9   0.0    1.5  1  PF10707.4  PhoP regulatory network protein YrbL
      0.053   13.3   0.1       0.13   12.0   0.0    1.6  1  PF13180.1  PDZ domain
      0.074   12.6   0.0        0.9    9.1   0.0    2.7  3  PF00967.12 Barwin family
      0.087   12.7   0.0        8.7    6.3   0.1    2.9  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.6   0.0   1.3e-73   1.1e-70       4     260 .]      67     336 ..      64     336 .. 0.90

  Alignments for each domain:
  == domain 1    score: 237.6 bits;  conditional E-value: 1.3e-73
                 EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH.HHCCB-HHHHHHHHHHHHHHHHHHHHT.CEE-S--SGGGEEEETT--E...EE------EEE..............CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllk.kegklseeeikkialqilegleylHsn.giiHrDLKpeNiLldkkgel...kiaDFGlakkl..............eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 ++ lG+G++G+V+ka++k+t++ +A+K++ k++ +++     +rE++ l + +Hpni+++++++e+ ++l++v+e++ gg+lfd +  ++  ++e ++ +i++qil g++++H++ g++HrDLKpeNiL+++k+      i+DFGla ++                ++e+l+t vgt++Y+APEv    k+y++++D+Ws+Gvi y ll+g +p+sg++e++ ++ +++ +  +++++ +++++ s+e+kd+i +l+++ p++R++a+++l+hpw+
   MMETSP1325-20131115|514_1  67 QKVLGRGQYGEVFKATHKETKEVFAIKRIVKHKVRRQH--ILRREMEFLLRANHPNIINVVDLIEDASRLWIVQEFCSGGELFDRIIdNQDGMTEPTAARIVQQILAGIQHCHDElGVVHRDLKPENILFKSKDPDselVIIDFGLAGEMkpgtmegkvkvdkdDAHEEHLKTTVGTPYYIAPEVFT--KNYGRECDIWSIGVIAYILLCGYPPYSGNDEKEIMQNVRSGR--DVQFHADHWEHVSKEAKDFIAQLMKRTPSDRPSAADALTHPWF 336
                 578***************************99998866..4678***************************************766659999*********************966**************954322344***********************999999*****************98..9****************************5555555555555..5666666666677*****************************8 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.5   0.0   3.3e-38   2.8e-35       4     254 ..      67     329 ..      65     333 .. 0.86

  Alignments for each domain:
  == domain 1    score: 121.5 bits;  conditional E-value: 3.3e-38
                 EEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHT.TEEEST-SGGGEEEET...TTEEEE-----CEES...........TTTSCEEESTT-E.ECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---....TTSBHHHHHHHHHHT-SSGGGS--HHH CS
  PF07714.12   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLesk.klvHrdLaarNvLlee...ekvvkisDfGLardi...........ekddyykkkeeak.lpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekp....ekcpeelyelmkqCweeepeeRptfke 254
                 +k lG+G++G+V+++t+k    +++   a+K + +++ ++ ++ + +e++++ + +hpni++++ ++ ++++l+iv e+++gG+L + + ++ ++ +t  +  ++++qi  G+++ +++  +vHrdL   N+L ++   ++   i DfGLa ++            kdd  +++ +++     ++apE++ +k++  + D+Ws Gv+ + +++ g  py+g +++e+++++++g+ ++      e++++e ++++ q ++++p++Rp+ ++
   MMETSP1325-20131115|514_1  67 QKVLGRGQYGEVFKATHK----ETKEVFAIKRIVKHKVRR-QHILRREMEFLLRANHPNIINVVDLIEDASRLWIVQEFCSGGELFDRIIDN-QDGMTEPTAARIVQQILAGIQHCHDElGVVHRDLKPENILFKSkdpDSELVIIDFGLAGEMkpgtmegkvkvDKDDAHEEHLKTTvGTPYYIAPEVF-TKNYGRECDIWSIGVIAYILLC-GYPPYSGNDEKEIMQNVRSGRDVQFHadhwEHVSKEAKDFIAQLMKRTPSDRPSAAD 329
                 578***************....888889****96666655.688999********************************************9.***********************98736**************966666999*******9998998888776544444444444441455677***66.5679**************8887.99****************99987654112278889999***************9765 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.6e-08   1.4e-05       2      27 ..     383     408 ..     382     410 .. 0.92
   2 !    9.8   0.1    0.0005      0.43       1      25 [.     417     441 ..     417     443 .. 0.92
   3 !   18.3   0.0   9.8e-07   0.00084       2      26 ..     454     478 ..     453     480 .. 0.94
   4 !   13.3   0.1   4.1e-05     0.035       2      28 ..     484     510 ..     483     511 .. 0.91

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 1.6e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 l+ +F+e+D Dg+G Is +E++ al+
   MMETSP1325-20131115|514_1 383 LRSIFQEIDADGSGAISIDELQVALA 408
                 799*******************9986 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0005
                 HHHHHHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkea 25 
                 e++ +F+ +D  g G Is++Ef++a
   MMETSP1325-20131115|514_1 417 EFDAFFEGLDAAGEGEISYNEFLAA 441
                 78999*****************986 PP

  == domain 3    score: 18.3 bits;  conditional E-value: 9.8e-07
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 +k+aFk fDk ++ +I++e++++++
   MMETSP1325-20131115|514_1 454 IKQAFKYFDKSNTNYITVEDLCQIV 478
                 79********************986 PP

  == domain 4    score: 13.3 bits;  conditional E-value: 4.1e-05
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++e++ e+D  +d kI ++Efk+++++
   MMETSP1325-20131115|514_1 484 ARELIGEADFRHDNKIAYDEFKQMMSM 510
                 589999*******************85 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   4.9e-08   4.2e-05       2      27 ..     383     408 ..     382     414 .. 0.93
   2 !   10.3   0.1   0.00056      0.48       1      25 [.     417     441 ..     417     443 .. 0.93
   3 !   19.4   0.0   6.7e-07   0.00057       2      26 ..     454     478 ..     453     482 .. 0.91
   4 ?    6.0   0.0     0.014        12       9      28 ..     491     510 ..     483     520 .. 0.84

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 4.9e-08
                HH---GCC-------B---HHHHHHH CS
  PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                lr++F+ +D dg+G i+++EL+ aL 
  MMETSP1325-20131115|514_1 383 LRSIFQEIDADGSGAISIDELQVALA 408
                89********************9996 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00056
                HHH---GCC-------B---HHHHH CS
  PF13405.1   1 elreaFklfDkdgdGkidaeELrda 25 
                e+ ++F+ +D  g G+i+ +E+++a
  MMETSP1325-20131115|514_1 417 EFDAFFEGLDAAGEGEISYNEFLAA 441
                699*******************986 PP

  == domain 3    score: 19.4 bits;  conditional E-value: 6.7e-07
                HH---GCC-------B---HHHHHH CS
  PF13405.1   2 lreaFklfDkdgdGkidaeELrdaL 26 
                +++aFk fDk ++++i+ e+L ++ 
  MMETSP1325-20131115|514_1 454 IKQAFKYFDKSNTNYITVEDLCQIV 478
                799******************9986 PP

  == domain 4    score: 6.0 bits;  conditional E-value: 0.014
                C-------B---HHHHHHH. CS
  PF13405.1   9 fDkdgdGkidaeELrdaLrk 28 
                 D+ +d+ki  +E+++++++
  MMETSP1325-20131115|514_1 491 ADFRHDNKIAYDEFKQMMSM 510
                58889*************96 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0     6e-10   5.1e-07       1      65 [.     382     441 ..     374     442 .. 0.88
   2 !   30.4   0.4   3.4e-10   2.9e-07       2      66 .]     454     508 ..     453     508 .. 0.89

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 6e-10
  PF13499.1   1 klkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                +l+ +F+++D dg+g ++ +eL+ +l          +   + d++f+ lD  g G +s++Efl+a
  MMETSP1325-20131115|514_1 382 QLRSIFQEIDADGSGAISIDELQVALADRP-----AQAGLEFDAFFEGLDAAGEGEISYNEFLAA 441
                6899**********************8753.....3333355888*****************986 PP

  == domain 2    score: 30.4 bits;  conditional E-value: 3.4e-10
  PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                +k+aFk +Dk++++y+++e+L ++    +           ++++++e+D  +d ++ ++Ef q++
  MMETSP1325-20131115|514_1 454 IKQAFKYFDKSNTNYITVEDLCQIVGDES----------TARELIGEADFRHDNKIAYDEFKQMM 508
                799*****************999987644..........45557*******************98 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0     2e-06    0.0017      25      54 .]     381     410 ..     379     410 .. 0.93
   2 !   12.0   0.1   0.00013      0.11      26      50 ..     417     441 ..     416     443 .. 0.93
   3 ?    5.3   0.0     0.015        13      24      49 ..     451     476 ..     445     478 .. 0.85
   4 !   15.3   0.1   1.2e-05      0.01      24      52 ..     481     509 ..     476     511 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 2e-06
  PF13833.1  25 eevdilfrefDtdgdGkisfeEFcvllerl 54 
                e+++ +f e+D+dg+G+is +E  v+l+++
  MMETSP1325-20131115|514_1 381 EQLRSIFQEIDADGSGAISIDELQVALADR 410
                6799*********************99875 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00013
  PF13833.1  26 evdilfrefDtdgdGkisfeEFcvl 50 
                e+d+ f  +D+ g G is++EF+++
  MMETSP1325-20131115|514_1 417 EFDAFFEGLDAAGEGEISYNEFLAA 441
                899*******************986 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.015
  PF13833.1  24 eeevdilfrefDtdgdGkisfeEFcv 49 
                e  +   f+ fD  + ++i+ e+ c+
  MMETSP1325-20131115|514_1 451 EANIKQAFKYFDKSNTNYITVEDLCQ 476
                5667778****************996 PP

  == domain 4    score: 15.3 bits;  conditional E-value: 1.2e-05
  PF13833.1  24 eeevdilfrefDtdgdGkisfeEFcvlle 52 
                e+++++l+ e+D+ +d+ki ++EF++++ 
  MMETSP1325-20131115|514_1 481 ESTARELIGEADFRHDNKIAYDEFKQMMS 509
                677999*********************96 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   1.1e-08     9e-06       1      22 [.     383     404 ..     383     408 .. 0.90
   2 ?   -2.2   0.0       3.3   2.8e+03      14      22 ..     431     439 ..     420     442 .. 0.83
   3 ?    3.8   0.0     0.042        36       1      21 [.     454     474 ..     454     478 .. 0.90
   4 ?   -2.0   0.0       2.8   2.4e+03      13      25 .]     496     508 ..     495     508 .. 0.76

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 1.1e-08
                HHHHHHHH--S----B-HHHHH CS
  PF13202.1   1 lkdtFrafDlNgDGkIsreELk 22 
                l+++F+++D++g+G Is++EL+
  MMETSP1325-20131115|514_1 383 LRSIFQEIDADGSGAISIDELQ 404
                6889*****************8 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 3.3
                --B-HHHHH CS
  PF13202.1  14 GkIsreELk 22 
                G Is  E+ 
  MMETSP1325-20131115|514_1 431 GEISYNEFL 439
                99*****95 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.042
                HHHHHHHH--S----B-HHHH CS
  PF13202.1   1 lkdtFrafDlNgDGkIsreEL 21 
                +k++F+ fD+ +   I+ e+L
  MMETSP1325-20131115|514_1 454 IKQAFKYFDKSNTNYITVEDL 474
                6778*************9987 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 2.8
                ---B-HHHHHHHH CS
  PF13202.1  13 DGkIsreELkrlv 25 
                D kI  +E+k+++
  MMETSP1325-20131115|514_1 496 DNKIAYDEFKQMM 508
                6677779**9986 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.49   4.2e+02       3      85 ..      68     156 ..      66     178 .. 0.58
   2 !   23.3   0.0   4.6e-08   3.9e-05     162     196 ..     175     212 ..     152     217 .. 0.76

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.49
                 EEEE--SSEEEEEEEETT...TEEEEEESSC..CHHHHHHHHHHHHHHHCCSSSB--BEEE..E-CSSCSCEEEEEE---HHBCCT.......C CS
  PF01636.18   3 relsgGasnrtyrvttga.g.ryvlrrarpa..raaeelrrevallrlLakagipvPevlagdtdddvlgllfalleyvpgevler.......k 85 
                 ++l+ G++ +++  t+++ +  ++ +r+ ++  r +  lrre+++l + a++   +  v+++ +d+     l+ ++e++ g  l +        
   MMETSP1325-20131115|514_1  68 KVLGRGQYGEVFKATHKEtKeVFAIKRIVKHkvRRQHILRREMEFLLR-ANH-PNIINVVDLIEDASR---LWIVQEFCSGGELFDriidnqdG 156
                 567888999999999888444333444333325667777899998888.555.445666773334433...46677777777766656664333 PP

  == domain 2    score: 23.3 bits;  conditional E-value: 4.6e-08
                 C.SS--EEB-SS-SGGGEEEE...TTTTEEEE---TT-B CS
  PF01636.18 162 g.aeppvllHgDlhpgNllvd...pddgrvgviDfedag 196
                   +++ +++H+Dl+p N+l++   pd + v +iDf++ag
   MMETSP1325-20131115|514_1 175 HcHDELGVVHRDLKPENILFKskdPDSELV-IIDFGLAG 212
                 2467899***************97777777.******98 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   4.6e-07   0.00039      24     149 ..      78     209 ..      72     219 .. 0.79
   2 ?   -3.8   0.0       7.4   6.3e+03      54      68 ..     499     513 ..     482     522 .. 0.57

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 4.6e-07
                 SS-HHHHHT---TTS-GG..G--HHHHHHHHHHHHHHHHHHCHH--.--S--EEE.EETTEEEEE----TTCEGGCTTTS-.....-HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEES...S.SEEE---T CS
  PF01163.17  24 eFkkvkkyvdgdarfkdrksktnprklvklwaekEfrnLkrleeag.vrvPkpia.lkrnvlvmefigedgvaapklkdvel....eeaeelyeeileemrklykeaglvHaDLSeyNvlvde...d.kvviIDvs 149
                 +Fk  +k +++ + +k+     +++   + + ++E++ L r+++ + ++v + i+   r  +v ef++  g    ++ d++       a++++++il+ ++    e g+vH DL   N+l+++   d ++viID++
   MMETSP1325-20131115|514_1  78 VFKATHKETKEVFAIKRI---VKHKVRRQHILRREMEFLLRANHPNiINVVDLIEdASRLWIVQEFCS-GGELFDRIIDNQDgmtePTAARIVQQILAGIQHCHDELGVVHRDLKPENILFKSkdpDsELVIIDFG 209
                 688888888888886655...344444456789******9999887688888885267778*******.67777888888877887788999****************************9852224689****97 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 7.4
                 HHHHHHHHHHHCHH- CS
  PF01163.17  54 waekEfrnLkrleea 68 
                 +a  Ef++++ ++e+
   MMETSP1325-20131115|514_1 499 IAYDEFKQMMSMAEH 513
                 333444444444443 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   6.3e-07   0.00054      11      80 ..     555     627 ..     547     628 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 6.3e-07
                 H---EEEESSTTSSSSEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTSHHHHHHHHHHTHHS...EEEEEE CS
  PF00595.19  11 glGfslkggsdkrdkgifvsevvpggaaeagglkeGDkIlsvNgvdvenvshdeavqaikgkkg...evtLti 80 
                  +Gf +   + + ++  fv +v+p ++ae +g+ e D +  ++++ v ++s  ++v++i g+++   ++++t+
   MMETSP1325-20131115|514_1 555 HIGFDINQVQIDTSRFTFVRSVEPASPAEEAGIMELDLLQTLGDTEVGDMSASDIVEFINGAVKdnePLPITV 627
                 688888888887799**********************************************998777666665 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.8e-06    0.0015     115     166 ..     157     209 ..     136     222 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 1.8e-06
  PF06293.9 115 laeelkralleavGrliakmhr.agvnHtdlnahnilldeeeekakvwliDld 166
                + e    ++++++ + i+  h+  gv H+dl + nil++ ++ + ++ +iD+ 
  MMETSP1325-20131115|514_1 157 MTEPTAARIVQQILAGIQHCHDeLGVVHRDLKPENILFKSKDPDSELVIIDFG 209
                778888999************736***************************96 PP

>> PF01633.15  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   2.3e-05      0.02     130     173 ..     167     212 ..     153     218 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.3e-05
                 HHHHHHHTT----EEEE-S------EEE..-------EE---TT-E CS
  PF01633.15 130 eeleklleekespvvfCHnDlqegNill..nkeekklvlIDFEYas 173
                 +++ + +++ + ++   H Dl ++Nil+  ++ +++lv+IDF  a+
   MMETSP1325-20131115|514_1 167 QQILAGIQHCHDELGVVHRDLKPENILFksKDPDSELVIIDFGLAG 212
                 55555667788889999***********55556789******7665 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011     0.091     136     165 ..     179     207 ..     149     211 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00011
  PF10707.4 136 enrIvardlkpknivvgrrsegeeelvlvD 165
                e+++v rdlkp+ni+++ ++ ++ elv++D
  MMETSP1325-20131115|514_1 179 ELGVVHRDLKPENILFKSKDPDS-ELVIID 207
                578********************.*****9 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00015      0.13       3      55 ..     556     612 ..     554     627 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00015
  PF13180.1   3 iGvsvsqlen..trgvlvvsVkessPaakaglkpGDiilkvdgkkvksl..tdlksl 55 
                iG  + q++   +r   v sV+++sPa++ag+   D +  +++++v +   +d ++ 
  MMETSP1325-20131115|514_1 556 IGFDINQVQIdtSRFTFVRSVEPASPAEEAGIMELDLLQTLGDTEVGDMsaSDIVEF 612
                66666666555456667889**************************77633555555 PP

>> PF00967.12  Barwin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       5.3   4.6e+03      48      80 ..      63      96 ..      54      98 .. 0.70
   2 ?    9.1   0.0     0.001       0.9      61     105 ..     351     397 ..     322     409 .. 0.74
   3 ?   -0.3   0.0      0.83   7.1e+02      77     105 ..     405     432 ..     399     436 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 5.3
  PF00967.12 48 fcgpagnrgqsscGkclrvtntatgas.vivriv 80
                +  + +  g+ + G  +++t + t     i riv
   MMETSP1325-20131115|514_1 63 YNIDQKVLGRGQYGEVFKATHKETKEVfAIKRIV 96
                6667777888899999999998887651455666 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.001
  PF00967.12  61 Gkclrvtntatgas..vivrivdqcsngGldldeavfkkldtdGaGy 105
                 G  l + n+ +  +    + ivd   n  ++  +++f+++d+dG G 
   MMETSP1325-20131115|514_1 351 GPRLEIFNSMNRLKkmAAMVIVDRARNEEIEQLRSIFQEIDADGSGA 397
                 555555565554431145679***********************995 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 0.83
  PF00967.12  77 vrivdqcsngGldldeavfkkldtdGaGy 105
                 v + d  +++Gl+ d a f+ ld+ G+G 
   MMETSP1325-20131115|514_1 405 VALADRPAQAGLEFD-AFFEGLDAAGEGE 432
                 556788899999998.68********995 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.091        77      54     111 ..     381     439 ..     355     444 .. 0.75
   2 ?    6.3   0.1      0.01       8.7      50     111 ..     448     505 ..     439     507 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.091
  PF10591.4  54 eaveWkFnqlDtnkdkvlsksElaplrapl.vklehCikeffksCDadkdkkisleEWc 111
                e+++  F+++D +  + +s  El+   a+   +     + ff+  Da  +++is +E+ 
  MMETSP1325-20131115|514_1 381 EQLRSIFQEIDADGSGAISIDELQVALADRpAQAGLEFDAFFEGLDAAGEGEISYNEFL 439
                55566688888888888888888765555113333346799***************996 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.01
  PF10591.4  50 keckeaveWkFnqlDtnkdkvlsksElaplraplvklehCikeffksCDadkdkkisleEWc 111
                ++ + +++  F+ +D+ + ++++ + l ++  +    e+  +e++ ++D  +d+ki+ +E+ 
  MMETSP1325-20131115|514_1 448 RMDEANIKQAFKYFDKSNTNYITVEDLCQIVGD----ESTARELIGEADFRHDNKIAYDEFK 505
                566778888999999999999999999998887....***********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       609  (0.0445436); expected 273.4 (0.02)
Passed bias filter:                      481  (0.0351814); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 1.19u 0.39s 00:00:01.58 Elapsed: 00:00:01.01
# Mc/sec: 1615.76
//
Query:       MMETSP1325-20131115|519_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-15   54.7   0.3    7.9e-15   54.0   0.2    1.4  1  PF04716.9  ETC complex I subunit conserved region
  ------ inclusion threshold ------
      0.052   12.1   0.3       0.07   11.7   0.2    1.2  1  PF03308.11 ArgK protein
        0.1   12.7   3.2       0.32   11.0   0.8    2.0  2  PF10020.4  Uncharacterized protein conserved in bacteria (DUF2262)


Domain annotation for each model (and alignments):
>> PF04716.9  ETC complex I subunit conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.2   1.7e-18   7.9e-15       2      56 ..      21      75 ..      20      76 .. 0.97

  Alignments for each domain:
  == domain 1    score: 54.0 bits;  conditional E-value: 1.7e-18
  PF04716.9  2 nPrsaLlalYtktLkkLkkiPedsvYRqstEaltkeRLkiveeeedvekiekkig 56
               n r+ L+a+ ++ L+++k+iPe+++YRqs+Ea+ ++RLk+  ee+  e ie +ig
  MMETSP1325-20131115|519_1 21 NGRANLIAMQQQLLEAVKAIPETAAYRQSVEATANYRLKVATEETEEEVIEATIG 75
               789*************************************************997 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   1.5e-05      0.07     125     215 ..      69     163 ..      42     176 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.5e-05
                 EEEE------HHHHHHTT-SS-EEE..E---------------TTT.-SEEE.E----HHHHHHHHHHHHHHHHHS--SBTTB--EEEE-BTTTT CS
  PF03308.11 125 ilvetvGvGqsevdiievadtvvlv..tlpgaGDelqaikaGllei.aDilv.vnkaDkeeaekaarelraaleleeekekeWrppvlktsaveg 215
                 ++  t+G Gq e  i +  d + l+   + + G e+ a  a   ++ aDi   + ++Dke+ae+aa+elr + + +++++  Wr+   +   ++g
   MMETSP1325-20131115|519_1  69 VIEATIGFGQLEELIEQGKDEMELIeyYVGEKGWEMTADLAWQADVdADIQQdIERDDKEQAEAAAKELREMYHWHSKRSGVWRATARQGDQDRG 163
                 666799999999988888887644411677888888888877777767886449******************************98877655555 PP

>> PF10020.4  Uncharacterized protein conserved in bacteria (DUF2262)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.5    0.0022        10      30      87 ..      56     116 ..      35     121 .. 0.81
   2 ?   11.0   0.8     7e-05      0.32      13      70 ..      98     155 ..      87     158 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0022
  PF10020.4  30 vslsfsdeddeeeeeleealk..llkkllknqeewdkkikdfaaeklleland..wreddee 87 
                 +l + + +++eee +e+ +   +l++l+++ ++  + i+ ++ ek  e+  d  w++d + 
  MMETSP1325-20131115|519_1  56 YRLKV-ATEETEEEVIEATIGfgQLEELIEQGKDEMELIEYYVGEKGWEMTADlaWQADVDA 116
                45666.77889999999965555***********************9999999888888776 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 7e-05
  PF10020.4  13 sekefegkidwkdkeksvslsf.sdeddeeeeeleealkllkkllknqeewdkkikdfa 70 
                 ek +e + d+  +++ v+ ++ +d + +++e+ e+a k+l++++ +  +   +++++a
  MMETSP1325-20131115|519_1  98 GEKGWEMTADLAWQAD-VDADIqQDIERDDKEQAEAAAKELREMYHWHSKRSGVWRATA 155
                5566676666665666.777777799*********************999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       649  (0.0474693); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.69
# Mc/sec: 757.11
//
Query:       MMETSP1325-20131115|520_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.001   18.6   0.1      0.083   12.8   0.0    2.3  2  PF00560.28 Leucine Rich Repeat
     0.0027   17.4   0.3       0.36   10.9   0.1    2.2  2  PF13516.1  Leucine Rich repeat
     0.0075   15.7   0.3      0.025   14.0   0.2    1.8  2  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.062   12.9   0.1      0.093   12.3   0.1    1.4  1  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.021        72       2      20 ..       9      27 ..       8      29 .. 0.82
   2 !   12.8   0.0   2.4e-05     0.083       1      22 []      30      52 ..      30      52 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.021
                ESEEEETSSBCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgNnlt.slppsls 20
                 + L+L ++ ++ ++   ++
   MMETSP1325-20131115|520_1  9 VTNLNLARTYIEgNIEV-FK 27
                578******99999988.76 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 2.4e-05
                TESEEEETSS.BCB.CHHHHHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.slppslsnL 22
                n+e+L+Ls + +l+ +++  + n+
   MMETSP1325-20131115|520_1 30 NIETLNLSECpKLQgNIQA-FANM 52
                799***********99*99.8875 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0      0.01        35       2      16 ..       7      21 ..       7      25 .. 0.83
   2 !   10.9   0.1   0.00011      0.36       3      23 ..      30      50 ..      30      51 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.01
  PF13516.1  2 knLtsLdLsnNqigd 16
               k+ t+L+L ++ i +
  MMETSP1325-20131115|520_1  7 KSVTNLNLARTYIEG 21
               5789*****999965 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00011
  PF13516.1  3 nLtsLdLsnNqigdeGlsaLa 23
               n+++L+Ls ++  +  ++a+a
  MMETSP1325-20131115|520_1 30 NIETLNLSECPKLQGNIQAFA 50
               89********97666666666 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.2   7.3e-06     0.025       2      43 ..       8      50 ..       7      51 .. 0.83
   2 !    8.5   0.1   0.00039       1.3       2      24 ..      30      53 ..      30      57 .. 0.67

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 7.3e-06
  PF12799.2  2 nLevLdLsnNnIk.dlppelanLpnLktLnLsnNp.is.dlsaLa 43
               + + L+L+++ I+ +++  ++ + n +tLnLs +p ++ ++ a+a
  MMETSP1325-20131115|520_1  8 SVTNLNLARTYIEgNIEV-FKDM-NIETLNLSECPkLQgNIQAFA 50
               6789*********89***.****.**********65754666666 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00039
  PF12799.2  2 nLevLdLsnN.nIk.dlppelanLp 24
               n e+L+Ls++ +++ ++ + +an+p
  MMETSP1325-20131115|520_1 30 NIETLNLSECpKLQgNIQA-FANMP 53
               6778888887436656666.66665 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   2.7e-05     0.093       2      49 ..       8      53 ..       7      57 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.7e-05
  PF13855.1  2 nLkeLdLsnNrlk.vipdgaFkglsnLkvLdLs.gnnlksispeafkgLp 49
               ++++L+L ++ ++ +i+  +Fk++ n ++L+Ls + +l+  + +af+++p
  MMETSP1325-20131115|520_1  8 SVTNLNLARTYIEgNIE--VFKDM-NIETLNLSeCPKLQ-GNIQAFANMP 53
               67899999998887776..9****.5*******555554.4456788876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.64
# Mc/sec: 217.17
//
Query:       MMETSP1325-20131115|524_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-05   22.0   0.2        1.4    9.1   0.0    3.5  3  PF02985.17 HEAT repeat
  ------ inclusion threshold ------
       0.14   12.2   0.1       0.35   10.9   0.0    1.7  2  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2


Domain annotation for each model (and alignments):
>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00056       3.8       4      26 ..      16      38 ..      14      43 .. 0.84
   2 !    9.1   0.0    0.0002       1.4      13      28 ..     115     130 ..     109     133 .. 0.88
   3 ?    0.5   0.0      0.11   7.5e+02      10      20 ..     197     207 ..     193     216 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00056
                HHHHHHTSSSHHHHHHHHHHHHH CS
  PF02985.17  4 lllkllnDpspeVReaAaeaLga 26
                +l++++ ++ ++ ReaA+  +  
   MMETSP1325-20131115|524_1 16 YLVRCIMSKQWSLREAAIIKIKL 38
                6899*************987765 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0002
                 SHHHHHHHHHHHHHHH CS
  PF02985.17  13 speVReaAaeaLgala 28 
                  p+VReaA+ +L  la
   MMETSP1325-20131115|524_1 115 QPRVREAAIDSLLSLA 130
                 69**********9998 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.11
                 TSSSHHHHHHH CS
  PF02985.17  10 nDpspeVReaA 20 
                 +++  eVR+aA
   MMETSP1325-20131115|524_1 197 SHTFQEVRDAA 207
                 67888*****9 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.3   9.1e+03      78      93 ..      72      87 ..      64      88 .. 0.64
   2 ?   10.9   0.0   5.2e-05      0.35      17      68 ..     180     230 ..     173     235 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.3
  PF10046.4 78 LeeavkeLDeyskeLE 93
               + ++   LD+ +ke E
  MMETSP1325-20131115|524_1 72 FLSTLGLLDAACKEFE 87
               4566777888888877 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 5.2e-05
  PF10046.4  17 eisaedlklLeklNeataekykeleqkakslekeleklkqkyeelkpylqqi 68 
                ++s++ + +  + Neat++ ++e+++ a +l + l++  +++ e++pyl+++
  MMETSP1325-20131115|524_1 180 ATSTDTIMTFINSNEATSHTFQEVRDAARELTVALHQQVGLS-EIEPYLANL 230
                566777888899**********************99987775.456777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.70
# Mc/sec: 890.08
//
Query:       MMETSP1325-20131115|526_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.073   12.9   0.1       0.37   10.6   0.1    2.3  2  PF05725.7 FNIP Repeat


Domain annotation for each model (and alignments):
>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.14   1.9e+03      38      38 ..      54      54 ..      13      82 .. 0.55
   2 ?   10.6   0.1   2.7e-05      0.37       7      41 ..     174     208 ..     168     209 .] 0.89

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.14
  PF05725.7 38 e 38
               +
  MMETSP1325-20131115|526_1 54 K 54
               1 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 2.7e-05
  PF05725.7   7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyF 41 
                i  LP +++ L+l    + k +  sLP+S++ L++
  MMETSP1325-20131115|526_1 174 IKDLPHSITDLNLEMCVKLKGNLESLPKSVTNLNL 208
                779**********999999999**********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.57
# Mc/sec: 863.51
//
Query:       MMETSP1325-20131115|529_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-43  147.2   0.2    4.4e-43  147.1   0.1    1.0  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.1   0.1   3.2e-47   4.4e-43     212     335 .]       3     119 ..       1     119 [. 0.91

  Alignments for each domain:
  == domain 1    score: 147.1 bits;  conditional E-value: 3.2e-47
                 EEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT.TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
  PF00225.18 212 titleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaenkkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakni 335
                 ++t+e++n+ +     +++ +kl+LvDLAGsEr+sk+gaa ++ lkEa++INkSL+aLg+vI + a++  s+hvp+R+S LT+lLqdsL+g+sktlm+v++sp   n+eet+++L+fa+r++++
   MMETSP1325-20131115|529_1   3 NVTVESTNRVSG----QTTWGKLHLVDLAGSERISKSGAA-GQALKEAQAINKSLSALGDVIMSRAQK--SAHVPFRNSTLTHLLQDSLSGDSKTLMFVCISPVMYNAEETFCSLNFAQRVNSV 119
                 567777775543....3589******************65.777*********************999..**************************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.60
# Mc/sec: 507.23
//
Query:       MMETSP1325-20131115|528_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-11   43.6   0.2    1.9e-06   28.0   0.0    2.5  2  PF13637.1  Ankyrin repeats (many copies)
    2.7e-10   40.3   0.1    7.4e-10   38.9   0.0    1.7  2  PF12796.2  Ankyrin repeats (3 copies)
    6.2e-10   38.6   0.4    1.7e-09   37.2   0.1    1.9  2  PF07647.12 SAM domain (Sterile alpha motif)
    3.2e-09   36.6   0.2    8.9e-05   22.4   0.0    2.4  2  PF13857.1  Ankyrin repeats (many copies)
    4.7e-09   36.2   0.1    8.9e-09   35.3   0.1    1.5  1  PF00536.25 SAM domain (Sterile alpha motif)
    5.2e-09   35.3   0.0    1.2e-08   34.2   0.0    1.6  1  PF00023.25 Ankyrin repeat
    1.3e-06   27.9   0.0    2.1e-05   24.1   0.0    2.5  2  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.6e-07   0.00032      26      54 .]     186     214 ..     148     214 .. 0.88
   2 !   28.0   0.0   9.8e-10   1.9e-06      12      53 ..     205     246 ..     205     247 .. 0.98

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 1.6e-07
  PF13637.1  26 dinrtdesGntaLhiAalrgnieilklLl 54 
                ++n+ de+Gnt+L iA ++gn +i+klL+
  MMETSP1325-20131115|528_1 186 NLNKMDEFGNTLLLIASQNGNEKIAKLLV 214
                799************************96 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 9.8e-10
  PF13637.1  12 grlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                g+++++klL+ekg+++n+++++G t  h+A ++g++++l +L
  MMETSP1325-20131115|528_1 205 GNEKIAKLLVEKGANPNHQNRQGQTSGHFANSYGFWDLLSWL 246
                799**************************************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.1     6e+03      39      55 ..      43      59 ..      18      70 .. 0.70
   2 !   38.9   0.0   3.8e-13   7.4e-10      25      80 ..     189     248 ..     173     258 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 3.1
  PF12796.2 39 leivklLleagadvnak 55
               l++v+ L +a+a+ n +
  MMETSP1325-20131115|528_1 43 LNMVQRLKAAEAERNKQ 59
               45666666666666655 PP

  == domain 2    score: 38.9 bits;  conditional E-value: 3.8e-13
  PF12796.2  25 l....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLle 80 
                     g+t L +A+++gn +i+klL+e+ga++n+++ +g+t  h+A ++g  +l+ +L +
  MMETSP1325-20131115|528_1 189 KmdefGNTLLLIASQNGNEKIAKLLVEKGANPNHQNRQGQTSGHFANSYGFWDLLSWLFD 248
                233367**************************************************9985 PP

>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.1   8.9e-13   1.7e-09      18      66 .]       2      50 ..       1      50 [. 0.97
   2 ?   -2.0   0.0       1.5   2.9e+03       7      25 ..     133     151 ..     132     152 .. 0.82

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 8.9e-13
                -CCSHHHHHHHTS-SCTCCCSSCHHHHH.CCCHHCHHHHHHHHHHHHCHH CS
  PF07647.12 18 lkqYtenFrdqgitggelllrlteedLk.rlGitsvghrkkilkkiqelk 66
                l+qY e+F+d+ ++g   l  l+ +dLk  lGi+   hrkkil+ +q+lk
   MMETSP1325-20131115|528_1  2 LGQYREAFVDAAVDG-NFLYDLNDDDLKnTLGIEHRLHRKKILNMVQRLK 50
                79*************.********************************97 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.5
                 HHHHHHHHHT--CCSHHHH CS
  PF07647.12   7 edvaeWLrsiglkqYtenF 25 
                 +++  W+r  ++k+  e++
   MMETSP1325-20131115|528_1 133 DELIGWVRHSKYKKLREAL 151
                 57788***99999998875 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   4.6e-08   8.9e-05       8      55 ..     186     233 ..     181     234 .. 0.90
   2 !   19.6   0.0   3.7e-07   0.00071       1      47 [.     213     261 ..     213     269 .. 0.91

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 4.6e-08
  PF13857.1   8 dvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldl 55 
                ++n  de+gnt+L +A  +g+  +++lL+++ga++n+++ +g+t  ++
  MMETSP1325-20131115|528_1 186 NLNKMDEFGNTLLLIASQNGNEKIAKLLVEKGANPNHQNRQGQTSGHF 233
                5677799************************************97665 PP

  == domain 2    score: 19.6 bits;  conditional E-value: 3.7e-07
  PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLl...apgadlnlrds 47 
                L+e+g a++n+++++g+t  h+A ++g ++++ +L+    +gad +l + 
  MMETSP1325-20131115|528_1 213 LVEKG-ANPNHQNRQGQTSGHFANSYGFWDLLSWLFdpeGAGADDTLLNR 261
                899**.******************************99999999888886 PP

>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   4.5e-12   8.9e-09      17      64 .]       2      50 ..       1      50 [. 0.98

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 4.5e-12
                -GGGHHHHHCT--SHHHHTT--HHHHHH.H-------HHHHHHHHHHHH CS
  PF00536.25 17 lgqYvdnFrageidgdallllteedLek.lgvtllGHrkkIlssIqrlk 64
                lgqY++ F +  +dg  l  l+++dL++ lg+ +  HrkkIl+ +qrlk
   MMETSP1325-20131115|528_1  2 LGQYREAFVDAAVDGNFLYDLNDDDLKNtLGIEHRLHRKKILNMVQRLK 50
                89*********************************************98 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0     6e-12   1.2e-08       2      32 ..     194     224 ..     193     225 .. 0.97

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 6e-12
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G+T L +A+++gn +++klL+++GA++n+q+
   MMETSP1325-20131115|528_1 194 GNTLLLIASQNGNEKIAKLLVEKGANPNHQN 224
                 9*****************************9 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   1.1e-08   2.1e-05       1      30 []     193     222 ..     193     222 .. 0.97
   2 ?    0.8   0.0      0.39   7.6e+02       2      23 ..     227     248 ..     226     257 .. 0.77

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 1.1e-08
  PF13606.1   1 nGnTpLhlAasngrielveaLlengadina 30 
                +GnT+L +A +ng+ +++++L+e+ga++n+
  MMETSP1325-20131115|528_1 193 FGNTLLLIASQNGNEKIAKLLVEKGANPNH 222
                59**************************97 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.39
  PF13606.1   2 GnTpLhlAasngrielveaLle 23 
                G+T  h A s+g ++l+++L +
  MMETSP1325-20131115|528_1 227 GQTSGHFANSYGFWDLLSWLFD 248
                6666688889999******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       773  (0.0565389); expected 273.4 (0.02)
Passed bias filter:                      504  (0.0368637); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.66u 0.38s 00:00:01.04 Elapsed: 00:00:00.69
# Mc/sec: 982.85
//
Query:       MMETSP1325-20131115|525_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-26   91.9   1.4    1.8e-26   91.6   1.0    1.2  1  PF01253.17 Translation initiation factor SUI1


Domain annotation for each model (and alignments):
>> PF01253.17  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.6   1.0   1.3e-30   1.8e-26       3      79 ..      39     114 ..      37     118 .. 0.95

  Alignments for each domain:
  == domain 1    score: 91.6 bits;  conditional E-value: 1.3e-30
  PF01253.17   3 ekekihirlekrrgrKtvTvvegleleeidlkkllkalkkkfacggtvvkdknkgevielQGdqrdkvkefLeekgi 79 
                  ++kihir+++r+grK++T+++gl  +++d+k ++ka+kk f+c+g v+kd++ gevi+l Gdqr  vk+fL ++ i
   MMETSP1325-20131115|525_1  39 DQSKIHIRVQQRNGRKCITTIQGLA-DDLDVKRICKAFKKNFSCNGAVSKDEEMGEVIQLSGDQRTLVKDFLVDQEI 114
                 689**********************.************************9999******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.66
# Mc/sec: 649.92
//
Query:       MMETSP1325-20131115|532_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 528.85
//
Query:       MMETSP1325-20131115|531_1  [L=600]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.8e-09   34.7   0.0     0.0025   16.9   0.0    2.3  2  PF07787.7 Protein of unknown function (DUF1625)
  ------ inclusion threshold ------
       0.11   12.2   0.9       0.23   11.2   0.7    1.5  1  PF09579.5 Sporulation protein YtfJ (Spore_YtfJ)


Domain annotation for each model (and alignments):
>> PF07787.7  Protein of unknown function (DUF1625)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.2e-06    0.0081      22      50 ..     242     270 ..     229     290 .. 0.77
   2 !   16.9   0.0   3.7e-07    0.0025     118     195 ..     445     524 ..     427     569 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.2e-06
  PF07787.7  22 tysyekeWsselinssrFkkeegheNpks 50 
                + +y+k W+ + ins  F+++  ++Np+ 
  MMETSP1325-20131115|531_1 242 SFTYHKGWRASRINSLLFDNPVAYNNPSR 270
                789************************97 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 3.7e-07
  PF07787.7 118 npevgDlRvsFeya.eaeqvsvvakqqnn.tllpystedgkeielieegeltaeevfkkeaeenalltwvlRlaGlilmf 195
                + + gD+Rv  e+   + +++vva+q+ +  l p ++ +g+   l ++g l+ e+    e+++ a l  +lR+ +l+l +
  MMETSP1325-20131115|531_1 445 TCNPGDVRVHLETRdLPPSLTVVAEQRADgFLIPHTFPNGRVAFLARHGILSLEAFVDAESNDAARLASWLRALSLVLAM 524
                5567*********9667889******988367899999977777******************99999999**99998743 PP

>> PF09579.5  Sporulation protein YtfJ (Spore_YtfJ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7   3.4e-05      0.23      18      68 ..      28      89 ..      22      98 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.4e-05
  PF09579.5 18 fgaGggefkkkk..kekekg....fggGsGaGvsie.PvAflvvkk....egvrllplkekt 68
               fg+Gg  ++++   +++ +g    +ggG G+Gv +  + A+l++++    +  +ll++  +t
  MMETSP1325-20131115|531_1 28 FGTGGRTYTNTVrvQRGGEGwrfgAGGGCGFGVAVVvTLALLITSErrleGTLSLLNVVAST 89
               9********99966333333775677777777765415677777777777778888887666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (600 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.91u 0.35s 00:00:01.26 Elapsed: 00:00:00.64
# Mc/sec: 2246.58
//
Query:       MMETSP1325-20131115|534_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       524  (0.0383265); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1143.52
//
Query:       MMETSP1325-20131115|533_1  [L=330]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-08   32.0   0.0     0.0074   15.8   0.0    2.3  2  PF00085.15 Thioredoxin
    2.2e-06   27.2   0.1    5.1e-06   26.0   0.0    1.6  2  PF10208.4  Degradation arginine-rich protein for mis-folding
     0.0058   16.3   0.0      0.039   13.6   0.0    2.0  2  PF13848.1  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.011   14.2   0.2       0.14   10.5   0.3    2.1  2  PF03249.8  Type specific antigen


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.2e-06    0.0074      37     102 ..      62     130 ..      38     132 .. 0.88
   2 !   14.1   0.0   7.2e-06     0.025      37     102 ..     183     249 ..     181     251 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.2e-06
                 HHHHHHHHHHTT-..TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEE.EE---.-HHHHHHHHH CS
  PF00085.15  37 aPeyeklaeelke..kvvlakvdvdenkdlaseygvegiPtlklfkngkkve.evegarekeklvaflk 102
                 +  +ekla +lke  +v++  vd+d +++l+s+   + +P +  + +g+ v  + + + + + l + lk
   MMETSP1325-20131115|533_1  62 EEAVEKLAAKLKEqgTVKVGAVDCDRERQLCSSRRKQQLPLFETVAAGEAVPlDSSATLHSKGLNEQLK 130
                 56789*******999*********************************999877777777777777665 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 7.2e-06
                 HHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEE..EE---.-HHHHHHHHH CS
  PF00085.15  37 aPeyeklaeelkekvvlakvdvdenkdlaseygvegiPtlklfkngkkve..evegarekeklvaflk 102
                 +P++ +la++++++v +a+v    n  l ++++v+++Pt+  + ++++++  +++ a ++ +l ++++
   MMETSP1325-20131115|533_1 183 SPVLLSLAHQFRGDVSFAEVRGS-NLALGQRFSVKSYPTVFAVCGSDEKArvSYTAAISAPDLGKWIS 249
                 589999**************887.558************99888777776578888899888888875 PP

>> PF10208.4  Degradation arginine-rich protein for mis-folding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.4   4.9e+03      73      84 ..      64      75 ..      50     100 .. 0.60
   2 !   26.0   0.0   1.5e-09   5.1e-06     103     143 ..     280     320 ..     272     325 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 1.4
               -HHHHHHHHHTT CS
  PF10208.4 73 Pvekiceklkkk 84
                vek+  klk++
  MMETSP1325-20131115|533_1 64 AVEKLAAKLKEQ 75
               444444454443 PP

  == domain 2    score: 26.0 bits;  conditional E-value: 1.5e-09
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF10208.4 103 dlkklkvkelkkilaeWgeeckgcleksdfikkieelkpky 143
                +l  ++ k+l+ +l+e g +c+gclek +f++k  +l+ k 
  MMETSP1325-20131115|533_1 280 ALGAMRLKDLRVLLSEHGASCDGCLEKDEFVAKAASLRAKS 320
                6788*****************************99998875 PP

>> PF13848.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.14   4.9e+02     100     143 ..      44      93 ..      27     106 .. 0.63
   2 !   13.6   0.0   1.1e-05     0.039       9      72 ..     183     249 ..     176     256 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.14
                XXX..XXXX..XXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXX CS
  PF13848.1 100 llf..lnkd..seeteklknriekvakkfkgk..infatvdadsfkrlle 143
                +l+  + ++  ++++  l++++ek+a k+k +  +++  vd+d+  +l++
  MMETSP1325-20131115|533_1  44 WLIhyYSSSteAKRPSGLEEAVEKLAAKLKEQgtVKVGAVDCDRERQLCS 93 
                33323222222555678899999999999655337777888887666665 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 1.1e-05
                HHHHHHHHHH--.--B------HHHHHH..TT---.--EEEEETTTT.EEEEE-HHT--HHHHHHHHH CS
  PF13848.1   9 keiFekaakelkgdvtfgvtsekevakk..lgike.pkvllfrkfde.krvkydgekltvddlkkfie 72 
                +  + + a++++gdv+f+ +  +++a    +++k+ p+v  +  +de  rv+y+ + +++ dl k+i 
  MMETSP1325-20131115|533_1 183 SPVLLSLAHQFRGDVSFAEVRGSNLALGqrFSVKSyPTVFAVCGSDEkARVSYTAA-ISAPDLGKWIS 249
                5578899**************99976555699999999998877555267777776.**********7 PP

>> PF03249.8  Type specific antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   4.1e-05      0.14     309     393 ..       4      95 ..       1     104 [. 0.59
   2 ?    1.0   0.0     0.032   1.1e+02     243     298 ..     258     311 ..     246     317 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 4.1e-05
  PF03249.8 309 vaqqqqgqgqqqqaq.ataqea..aaaaavrllngneq...iiqlykdlvklkrhagikkameklaaqqeedakne.gegdkkkkqgaseks 393
                  +qqq q qqq+a+    + +  +   a +  ++  +   +i+ y      kr +g+  a+eklaa+ +e++  + g  d+++++  + + 
  MMETSP1325-20131115|533_1   4 HHHQQQQQQQQQRAAeLYLRRSpvTRLGAPKFPDSKSKhvwLIHYYSSSTEAKRPSGLEEAVEKLAAKLKEQGTVKvGAVDCDRERQLCSSR 95 
                4444444434444331333322113334445444433322378999**********************888776542667777766644443 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.032
  PF03249.8 243 sdikpfadiagievpdtalpnsasveqiqnklqelndvleelresfdGyi.gnafad 298
                ++ k  a++a  + p+t++p+ a++  +  +l++l  +l e   s dG++ ++ f+ 
  MMETSP1325-20131115|533_1 258 REAKAQARVAK-NTPKTPIPDDAALGAM--RLKDLRVLLSEHGASCDGCLeKDEFVA 311
                56677777775.88**********9986..6889***************97777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       625  (0.0457139); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.35s 00:00:01.04 Elapsed: 00:00:00.57
# Mc/sec: 1363.44
//
Query:       MMETSP1325-20131115|537_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 264.86
//
Query:       MMETSP1325-20131115|536_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.4   0.0       0.18   11.8   0.0    1.9  1  PF10658.4 Protein of unknown function (DUF2484)
        1.6    8.7   5.0        0.3   11.0   0.7    1.8  2  PF13664.1 Domain of unknown function (DUF4149)


Domain annotation for each model (and alignments):
>> PF10658.4  Protein of unknown function (DUF2484)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.7e-05      0.18      16      45 ..     136     165 ..     134     169 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.7e-05
  PF10658.4  16 nvvallPsrdnhwrrayvLialgipllgwv 45 
                 vva+l s + hw + +vL ++ i+ + +v
  MMETSP1325-20131115|536_1 136 DVVAMLKSDKFHWANQFVLGLTVIVFVTYV 165
                689****************99999999888 PP

>> PF13664.1  Domain of unknown function (DUF4149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       0.4   2.8e+03       4       4 ..      65      65 ..      36      87 .. 0.60
   2 ?   11.0   0.7   4.4e-05       0.3       4      58 ..     101     166 ..      98     176 .. 0.71

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.4
  PF13664.1  4 g 4 
               g
  MMETSP1325-20131115|536_1 65 G 65
               1 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 4.4e-05
  PF13664.1   4 glllGallwvtfvv.apvlfrs..L....prhqagelqskl....Fpvyfglglalsvllllteva 58 
                +l++ + ++ +f++ a v+f s        +  +g +++ l    F++ + + l+l+v++++t+v 
  MMETSP1325-20131115|536_1 101 TLWFITFVFEVFISeAVVAFMSqkFarirGEDRFGDVVAMLksdkFHWANQFVLGLTVIVFVTYVH 166
                444444444445555555555555156687777788777778888******************994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 915.41
//
Query:       MMETSP1325-20131115|535_1  [L=812]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-39  133.7   1.2    1.6e-38  132.2   0.0    2.0  2  PF07859.8  alpha/beta hydrolase fold
     0.0013   17.4   0.1     0.0025   16.5   0.0    1.4  1  PF00135.23 Carboxylesterase family
     0.0051   16.4   0.0      0.014   15.0   0.0    1.8  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
       0.02   13.8   0.0      0.038   12.9   0.0    1.4  1  PF07136.6  Protein of unknown function (DUF1385)
      0.062   11.8   0.0        3.5    6.0   0.0    2.1  2  PF10340.4  Protein of unknown function (DUF2424)


Domain annotation for each model (and alignments):
>> PF07859.8  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.4       0.3   8.3e+02      76     128 ..     235     286 ..     227     306 .. 0.63
   2 !  132.2   0.0   5.9e-42   1.6e-38       1     210 [.     529     757 ..     529     758 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.3
                E-------HHHHHHHHHHH--.---EEEEEEES----TS-CHHHHHH.THHC.TS CS
  PF07859.8  76 aGdSaGGnLaaavalrardeg.epeiaaqvliyPgtdlertesesqelaeel.ad 128
                +G  a ++Laa +a +a+ +  +++ia q+  +   ++   ++++++l+++l ++
  MMETSP1325-20131115|535_1 235 VGATALAGLAAGAAKKAAHQPqAVAIAKQLASSAHRHT---DNAATRLNQHLsQH 286
                56666678999999777776425559999998885533...33344444444333 PP

  == domain 2    score: 132.2 bits;  conditional E-value: 5.9e-42
                EEEE------SS-TGGGHHHHHHHHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTT.............T.THTCCCCEEEEE-------HHHHHHHHHHH-----EEEEEEES----TS-CHHHHHH.THHCTSTTSS-HHHHHHHHHHHSS......GGGGGSTTTSGGGSS-..HTT---EEEEEEEE-TTS----HHHHHHHH----EEEEEEE-EE--TC CS
  PF07859.8   1 llyfHGGGfvlgsadthdalcrrlakelgavvvsvdYrlAPehrfPaavedalaalrwlaeqa.............w.elgadpsrivvaGdSaGGnLaaavalrardegepeiaaqvliyPgtdlertesesqelaeeladgplltrdamdlfwrlylp......eadrddplaspllasd..lsglpptlvvvaelDplrdegeayaerlraagvevelveyegmvHgfa 210
                l+y+HGG+f+    + +   ++++a+e+g+vv+ ++Y lAPe++fP+ +++ +++++ + +               + ++   p++++++G+SaGGnLaaa+a+++ + +  ++++++l yP  +l+++ ++s+     ++ +p+l+   m ++ + y++        +++ p++sp++  d  l+++p+t ++++++Dpl d++ ++  rl+++gv+ +l++ +g++Hgf+
  MMETSP1325-20131115|535_1 529 LFYVHGGAFIASLHAADMFALTKWARETGCVVIFPEYGLAPESPFPTGLNQLVDVWEAVCNGLvaqvsgmdvlgagSpNYMTTPASMTLVGESAGGNLAAALAVKLIQLKLRKPDGLCLAYPCLNLSSSPGPSRI---VHSFDPILPLGIMYAVLETYAGlhkevaFGAEKSPTMSPYHTPDnlLEHFPRTHIMAGGFDPLLDDSVDFNTRLQRMGVQSTLEVQKGLPHGFV 757
                68********99999999***************************************9998889999*******995599999*************************99999*********8878666677773...23556999999999999999944454532234489*****884347**********************************************96 PP

>> PF00135.23  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0     9e-07    0.0025     127     227 ..     528     632 ..     515     641 .. 0.91

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 9e-07
                 EEEE----------TTSGGGHHHHHHHHHT-EEEEE----TT-------HHTC-....-TT---HHHHHHHHHHHHHGGG----TTSEEEE------HHHHHHHH CS
  PF00135.23 127 VmVwIhGGgfqsgsaslddydgselaasenvivVtinYRlGalGFlslgdseap....pgNaGllDqvlALrWVkenIaaFGGDpnnvTlfGesAGaasvsllll 227
                 V++++hGG+f+     +d+++ ++ a++  ++v+ + Y l +   + +g +++         Gl  qv ++  + +   ++   p ++Tl+GesAG+ ++++l +
   MMETSP1325-20131115|535_1 528 VLFYVHGGAFIASLHAADMFALTKWARETGCVVIFPEYGLAPESPFPTGLNQLVdvweAVCNGLVAQVSGMDVLGAGSPNYMTTPASMTLVGESAGGNLAAALAV 632
                 99********9977778************************998888888887778886888************************************9999876 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.1e-06     0.014       3     141 ..     530     754 ..     528     755 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5.1e-06
  PF12695.2   3 vlvhGagg....dssayeplaealakrgfavvavdlpghgas...egaaaakrvl....................aadll....dleriilvGhSlGGgvalelag.................................................rddrvkglvllap........fpdgedlakltlpvllihGtrDgvv.ppeeaeklakalpgdaelvviegasH 141
                 +vhG++     +++++  l +   + g++v+ +++    +s   +g +++ +v                         +    ++  + lvG S+GG +a++la                                                   ++ + + v++++        + + ++l +    + ++ G  D ++ +   +++ +++++ +++l v +g  H
  MMETSP1325-20131115|535_1 530 FYVHGGAFiaslHAADMFALTKWARETGCVVIFPEYGLAPESpfpTGLNQLVDVWeavcnglvaqvsgmdvlgagS---PnymtTPASMTLVGESAGGNLAAALAVkliqlklrkpdglclaypclnlssspgpsrivhsfdpilplgimyavleTYAGLHKEVAFGAeksptmspYHTPDNLLEHFPRTHIMAGGFDPLLdDSVDFNTRLQRMGVQSTLEVQKGLPH 754
                567998774322334444555555555*****99998888886555555444444777899988888877775541...25556999******************999998777777777777777777777777777777666666666666653344444444444444444334555666666668888888888888666678888888888888888887777 PP

>> PF07136.6  Protein of unknown function (DUF1385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.4e-05     0.038      16     111 ..     259     359 ..     254     360 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.4e-05
  PF07136.6  16 lgikaLnfsaevaeeeeee..eeklsklelvltvilslalaialfvllptllaellkkvlesevllnllegvirlaifl...lyillislmkdikrvfqYH 111
                  +k+L  sa++ +++  +  +++ls+  + lt   sla+ai++  ++ + +  l++  ++s++ + l e  + l +++   ++++ +   ++++rv +YH
  MMETSP1325-20131115|535_1 259 AIAKQLASSAHRHTDNAATrlNQHLSQHGVKLTHNQSLAIAIGAVPVAAASVLGLCEWRTRSKLGFRLNECQFSLNVVMrlwTLVMNVVHSEKVRRVQSYH 359
                5679999999999988733468999*******************************9999*************999988555677888888********** PP

>> PF10340.4  Protein of unknown function (DUF2424)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0    0.0078        21     123     149 ..     527     553 ..     517     591 .. 0.80
   2 ?    6.0   0.0    0.0013       3.5     195     219 ..     613     637 ..     607     657 .. 0.73

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.0078
  PF10340.4 123 pvllylHGGgfalklipvtlvfLsnlr 149
                +vl y+HGG f+  l    +  L+   
  MMETSP1325-20131115|535_1 527 RVLFYVHGGAFIASLHAADMFALTKWA 553
                79**********999998888887655 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0013
  PF10340.4 195 knvvvlGdSaGGnlvLslllklskl 219
                  ++++G+SaGGnl   l +kl +l
  MMETSP1325-20131115|535_1 613 ASMTLVGESAGGNLAAALAVKLIQL 637
                5689**********99999997663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.23u 0.34s 00:00:01.57 Elapsed: 00:00:01.00
# Mc/sec: 1945.84
//
Query:       MMETSP1325-20131115|539_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   14.0   0.9      0.062   12.9   0.6    1.5  1  PF11527.3 The ARF-like 2 binding protein BART


Domain annotation for each model (and alignments):
>> PF11527.3  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.6   4.5e-06     0.062      40      73 ..      51      84 ..      48     105 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.5e-06
               S-SSTTHHHHHHHHHHHHHHHHHHHHH------- CS
  PF11527.3 40 eenkleyteihkeYkelvekllesfleelgispe 73
                e+++e ++++++Y+ + ekl+++fl+  + s e
  MMETSP1325-20131115|539_1 51 GEYSIELFDCYQRYQAMFEKLVDEFLQLHDGSLE 84
               7999**********************94444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 565.54
//
Query:       MMETSP1325-20131115|540_1  [L=356]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-38  129.4   0.9      2e-36  125.1   0.6    2.0  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.1   0.6   1.5e-40     2e-36     257     413 ..      22     191 ..       9     193 .. 0.88

  Alignments for each domain:
  == domain 1    score: 125.1 bits;  conditional E-value: 1.5e-40
                 -EEEE-----THHHHHHHHHHTT.SEEEEEE--CGGSSESEECCS-HHH.CCH---EBSTTTEEEEEBSTT.-BEE-S--................--EEEESTTS--B-TT-HHHHHHHBCCSTTEEE---EEEE-TT--EEEE--GGGEEE--.--EEEHHHHHHHHHTSTTE CS
  PF00501.23 257 rlilsggeplspellerlreafggirivngYGltEttgvvtvslpgdeetkpgsiGrplpgvevkivdeeg.kevppgev................GEllirgpgvakGYlkdpeltaeafdedgwlyrTGDlgrldedGyleiiGRkkdqikir.GeniepgeiEsallehpgv 413
                  l+++gg p++p+ ++ +r  +g +++++gY ltEt  + tv++++    + g +G+p++ ve+k+ d  + k   +  +                GE++irg+ v +GY+ ++e+t+e+fd+dgw ++TGD++ +d  G+l+i++R k++ik++ Ge+i+ +  Es ++++ +v
   MMETSP1325-20131115|540_1  22 MLFITGGGPINPDCQDVIRTMLG-TPLIQGYALTETAAAGTVQPHWSV--RNGVVGPPVQSVELKLADCLEvKDHSD-LPylgmdrshmgmpcqgrGEVWIRGDAVSSGYYVMEEKTKESFDSDGW-FHTGDIAIWDQYGQLKIVDRLKNLIKLKgGEYIAIEHMESTYANSVFV 191
                 6799******************7.************************..9***************99876433211.112333455556666666******************************.***************************66************9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.66
# Mc/sec: 1292.58
//
Query:       MMETSP1325-20131115|543_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.33s 00:00:00.82 Elapsed: 00:00:00.64
# Mc/sec: 782.56
//
Query:       MMETSP1325-20131115|542_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-29  102.0   0.0    4.6e-29  101.5   0.0    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.5   0.0   3.4e-33   4.6e-29       2     155 ..      56     200 ..      55     201 .. 0.81

  Alignments for each domain:
  == domain 1    score: 101.5 bits;  conditional E-value: 3.4e-33
                 XXXXXXXXXXXXXXXXXXX.---..-TTTTT--------TTT------------------S--TT--.STT-------S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT------- CS
  PF00504.16   2 paeldgslpgdlgfDplglskdp..tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeagglslptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 p++ldg+l gd gfDp+ +s d+  +l+++r+aEl+HGR++ la++G+lv+e + +l++ sk  + p +++ +  +l  +  +qi+l+ +++e+   +++ +       + + pG+l f    l+ k+e++  +lk+ Ei+++RlAMia++g vvq 
   MMETSP1325-20131115|542_1  56 PEKLDGTLVGDAGFDPMRIS-DTlqDLDYVRAAELKHGRISQLAIVGFLVEEKF-HLPMFSKISSNP-LTAVK--ELGVAPQAQIFLTLAIIEFITFNRTYD-------SSSAPGDLNFGAKYLEgKSEAQVLKLKEQEITHCRLAMIAITGAVVQT 200
                 899****************9.55689**************************44.334434444444.33322..244555568888888888876666543.......3568******9999999*****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.68
# Mc/sec: 733.00
//
Query:       MMETSP1325-20131115|545_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-08   34.4   8.6    1.3e-08   34.4   6.0    4.0  2  PF01485.16 IBR domain
  ------ inclusion threshold ------
      0.072   12.4   0.4        5.4    6.2   0.0    2.2  2  PF09572.5  XamI restriction endonuclease


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   6.0   1.9e-12   1.3e-08      20      64 .]      10      54 ..       1      54 [. 0.91
   2 ?   -3.2  14.6         1     7e+03      14      57 ..     111     238 ..      88     247 .. 0.83

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 1.9e-12
  PF01485.16 20 wCprpdCeaiiekekgakkssvtCskCgfefCflCkkewHeglsC 64
                 Cp+p+C a++++ +  + ++  C++Cg  fC++Ck+++H++ +C
   MMETSP1325-20131115|545_1 10 GCPTPNCPAYVVVRNPGNIEKCVCPTCGMVFCSQCKEPYHYDTTC 54
                7**************999999***********************9 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 1
  PF01485.16  14 sekelkwCprpdCeaiiekekgakks......................................................................................svtCskCgfefCflCkke 57 
                 +ek +++Cp+  C++++   +g++                                                                                         + C +C  e+C++C  +
   MMETSP1325-20131115|545_1 111 KEKHCRCCPH--CGKVVYRVDGCDSMtcgrdaqdkgggnkqdgcgkafnwaqaekykrpnesanlpkslaevdpdnikdikhhliavpsfekqrsheyrikcnvcgddivgpRFSCIHCMLETCIECSGN 238
                 677789**88..***********99889999999999999999999999999999999999999999999999999999999999999999999999988888888888888888888889999888765 PP

>> PF09572.5  XamI restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2    0.0041        28      82     127 ..      64     109 ..      57     118 .. 0.87
   2 ?    6.2   0.0   0.00079       5.4     176     205 ..     241     270 ..     217     282 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0041
  PF09572.5  82 iFvWveegekptdeereraavivadrLiaavadpiiRvaqerRqla 127
                 F W+  g+++  +e +     ++++   av d + R + ++R ++
  MMETSP1325-20131115|545_1  64 WFEWMASGKAAYLKESKAKEKAATKKFDKAVKDAMARFNDMQRDEE 109
                59*********999999888889999999**************887 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.00079
  PF09572.5 176 vvrakdakkgklpvliEaKssgdftntvKR 205
                 v++k++ ++++ + +E  s+   tnt +R
  MMETSP1325-20131115|545_1 241 TVMPKHTAEHAFKIHFEDASAVTITNTGRR 270
                578888888******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1077  (0.0787741); expected 273.4 (0.02)
Passed bias filter:                      448  (0.0327677); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.41s 00:00:01.08 Elapsed: 00:00:00.76
# Mc/sec: 1015.30
//
Query:       MMETSP1325-20131115|544_1  [L=456]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   21.9  32.7    0.00017   21.4  22.7    1.2  1  PF07133.6  Merozoite surface protein (SPAM)
    0.00012   20.2  19.7    0.00016   19.7  13.6    1.1  1  PF02724.9  CDC45-like protein
     0.0016   17.6  28.4     0.0024   17.1  19.7    1.2  1  PF05285.7  SDA1
     0.0035   15.8  30.3     0.0053   15.2  21.0    1.2  1  PF03344.10 Daxx Family
      0.004   14.8   4.3     0.0045   14.6   3.0    1.1  1  PF05758.7  Ycf1
  ------ inclusion threshold ------
      0.033   11.9  38.7      0.045   11.5  26.8    1.1  1  PF04147.7  Nop14-like family
      0.034   13.4  15.3      0.048   12.9  10.6    1.2  1  PF14153.1  Spore coat protein CotO
      0.037   12.5   8.4      0.049   12.1   5.8    1.1  1  PF04499.10 SIT4 phosphatase-associated protein
      0.091   12.0  27.1       0.14   11.3  18.8    1.2  1  PF07423.6  Protein of unknown function (DUF1510)
       0.26    8.7   7.4       0.34    8.4   5.1    1.1  1  PF12722.2  High-temperature-induced dauer-formation protein
       0.48    8.9  40.7       0.74    8.3  28.2    1.3  1  PF10446.4  Protein of unknown function (DUF2457)
       0.56    9.5  24.1        1.4    8.2  16.7    1.6  1  PF11861.3  Domain of unknown function (DUF3381)
       0.89    8.4  29.3        1.5    7.6  20.3    1.3  1  PF09073.5  BUD22
       0.91    9.4  14.6       0.44   10.4   8.3    1.9  2  PF14181.1  YqfQ-like protein
        1.9    7.0  29.6          3    6.3  20.5    1.2  1  PF03985.8  Paf1
        2.7    6.9  35.0        4.1    6.3  24.3    1.2  1  PF06213.7  Cobalamin biosynthesis protein CobT
        3.4    6.4  21.6        5.7    5.7  15.0    1.3  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
        4.3    5.4  37.5        6.8    4.8  26.0    1.2  1  PF04006.7  Mpp10 protein


Domain annotation for each model (and alignments):
>> PF07133.6  Merozoite surface protein (SPAM)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4  22.7   2.2e-07   0.00017      43     135 ..      32     124 ..       3     137 .. 0.67

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 2.2e-07
  PF07133.6  43 vkdekqEdeeeeeeeeeneeieekeeeedeeEivEeeeeEee.kkeeeekkeekdeekkqsneisneeikldskkDinaqnLisknykkndesk 135
                ++ ek+E+ ee+e+e+e +e e++ee+ede+E  Ee+e+E+e ++e+ee++e+kd+ek++++  +  ++   + +D   + Lisk      +s+
  MMETSP1325-20131115|544_1  32 TQGEKDEEGEEDEDEDE-DEDEDEEEDEDEDENEEEDEDEDEdEDENEEEDENKDKEKREEDTPTRSHQGDGQAEDVGEHPLISKGAGGGGKSQ 124
                34456665555555555.44455555555555556655555534566667778888888888888888999999*********99776666654 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7  13.6   2.1e-07   0.00016     105     187 ..      10     145 ..       2     174 .. 0.43

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 2.1e-07
  PF02724.9 105 gdieeelekeeeerd..ayealve.mkeeee.eesdedsdseddeeeeessasekrksesdedeedd.ddeededeeqrkrsnessl..................................................a 187
                gdi e+l ++++  +   + + ++ +k+ee+ e++ded+d+++deee+e ++ e++++++dede++d ++eede+++++kr+++  +                                                  +
  MMETSP1325-20131115|544_1  10 GDILENLLRIFTRIResTWLKNTQgEKDEEGeEDEDEDEDEDEDEEEDEDED-ENEEEDEDEDEDEDeNEEEDENKDKEKREEDT-PtrshqgdgqaedvgehpliskgaggggksqtrsnsllfmladkrsgvcnyS 145
                5555555555433221222222221222222222222222222222222222.22223333333333033333333344443332.2355566666666666666666666666666655555555555555555543 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1  19.7   3.2e-06    0.0024      95     169 ..      34     104 ..      15     166 .. 0.53

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 3.2e-06
  PF05285.7  95 edddeeWdvdsdeededeDeegewvdvesdeeeessDsedeeeeseeeeeeeesekkkkeesdeekseeeeeeaa 169
                 ++dee   ++de+++++++e+e++d+++de+e  +++ede+e+++e+eee+e+++k+k+e+d  +++++ + +a
  MMETSP1325-20131115|544_1  34 GEKDEEG--EEDEDEDEDEDEDEEEDEDEDENE--EEDEDEDEDEDENEEEDENKDKEKREEDTPTRSHQGDGQA 104
                2222221..112222222222333333333222..1111121222233333333333333334433333333333 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2  21.0     7e-06    0.0053     437     504 ..      32      94 ..      15     139 .. 0.44

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 7e-06
  PF03344.10 437 qeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedee 504
                  ++e++e++e++ede++de+e+e     ee+e+e+e+eee++d++e+ed ++ +++++d+e+ eed  
   MMETSP1325-20131115|544_1  32 TQGEKDEEGEEDEDEDEDEDEDE-----EEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKREEDTP 94 
                 23333333333333333222221.....1122222222222222222222221111111111111111 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   3.0     6e-06    0.0045     223     290 ..      29     110 ..      13     222 .. 0.59

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 6e-06
  PF05758.7 223 tkkl..kelseieer.seeekkkeieaesekkrakqeqeeeeeedsslaseekedkdkideqeekkveek...........k 290
                 k++  ++ +e ee  +e+e ++e e+e e +++++e++e+e+ed+   +ee+e+kdk +++e++ ++ +           +
  MMETSP1325-20131115|544_1  29 LKNTqgEKDEEGEEDeDEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKREEDTPTRSHqgdgqaedvgeH 110
                4444222222222222333333333333333333344433344444444444444444333333333333445555555550 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5  26.8   5.9e-05     0.045     334     405 ..      32      99 ..      14     113 .. 0.46

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5.9e-05
  PF04147.7 334 eeeeeeeeeegvededeeeddddeeeeeedvdedeeeedeedeesddeeeeeeeeeaseeeaeakkkkkktk 405
                ++ e++e  eg+edede+ed+d++e  eed+dede+ee++ede++d++e+eee+e++++e++e+++ +++++
  MMETSP1325-20131115|544_1  32 TQGEKDE--EGEEDEDEDEDEDEDE--EEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKREEDTPTRSHQ 99 
                2222222..3444444444333333..334444334444444444444444444332334444444443333 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9  10.6   6.4e-05     0.048      55     116 ..      31      92 ..      22     156 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.4e-05
  PF14153.1  55 eeqkeekaeveseeeaeeaesedeqesseqeeiaqeveeeeeeeeekqeevekekeaekeet 116
                ++q e+++e+e++e ++e e ede+e++ ++e ++e e e+e+e+e++ee e++ +++ ee 
  MMETSP1325-20131115|544_1  31 NTQGEKDEEGEEDEDEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKREED 92 
                34455555555555555555555555555555444444333333333333322222222222 PP

>> PF04499.10  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   5.8   6.4e-05     0.049     264     331 ..      30     157 ..       5     177 .. 0.44

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.4e-05
  PF04499.10 264 eeeee.seeeaedtsadaeqdsaedkreleasnasedseeededdeeseeseeseesaaelteeklrs.............................................................d 331
                 ++++  ++ee+e+++ ++e++++++++  +++++++++e+eded++e+e++ee+e++++e++ee + +                                                             d
   MMETSP1325-20131115|544_1  30 KNTQGeKDEEGEEDEDEDEDEDEDEEE--DEDEDENEEEDEDEDEDEDENEEEDENKDKEKREEDTPTrshqgdgqaedvgehpliskgaggggksqtrsnsllfmladkrsgvcnyskliklresqwkD 157
                 233332222222222222222222222..22222222222222222222222222222222222222222335555555555555555555555555555555555555555555555555555555554 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3  18.8   0.00018      0.14      46     106 ..      33      93 ..      12     116 .. 0.41

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00018
  PF07423.6  46 adeeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkeees 106
                + e++ee +ede++ e+e+++eee+e  +++++ed++e+e++de++ee+e+++kek ee++
  MMETSP1325-20131115|544_1  33 QGEKDEEGEEDEDEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKREEDT 93 
                2233333333333333333333333333333333322222222222222222222222222 PP

>> PF12722.2  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.1   0.00045      0.34     588     682 ..       8      99 ..       6     157 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00045
  PF12722.2 588 rhrkvfeqlkelilsiskelkeksnqkkkkeaksesisnleksnssestrsesnnndsrsasssevpeekkslaitddeddaseenstseasaeq 682
                r+ +++e+l  + + i ++   k++q +k+e+ +e+++++e+++++e++++   ++d+++ +++++ e +++++++d+++d+++++++++++++q
  MMETSP1325-20131115|544_1   8 RKGDILENLLRIFTRIRESTWLKNTQGEKDEEGEEDEDEDEDEDEDEEEDE---DEDENEEEDEDEDEDEDENEEEDENKDKEKREEDTPTRSHQ 99 
                666666666666666666665555553333333333333333333332222...33333333444445555556666666666666666666655 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  28.2   0.00097      0.74      24     110 ..      15     104 ..       1     111 [. 0.49

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00097
  PF10446.4  24 eklTlndtlkkelairklgeeaeeealeeedededdeeddddeDedddd..ddddeDdedde.lddddstladaseaddGnktdneagfa 110
                + l +  +++    ++  + e++ee +e+ededed++ed+++++++d++  +d+deD+++de +++d+++ +++ e+d   ++ +  g a
  MMETSP1325-20131115|544_1  15 NLLRIFTRIRESTWLKNTQGEKDEEGEEDEDEDEDEDEDEEEDEDEDENeeEDEDEDEDEDEnEEEDENKDKEKREEDTPTRSHQGDGQA 104
                555566666666667777777777777666555554444333322222200223333333332444444444444445444444444444 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  16.7    0.0018       1.4      81     152 ..      14      89 ..       9      99 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0018
  PF11861.3  81 kkLLkWRkkvrkelgekekkkek....eeeeeeeeveekdeeeqideelkellekelakekreerrenerkqkeil 152
                 +LL+   ++r++   k+++ ek    ee+e+e+e e++deee+ de+ +e+ ++ +++ ++e+++e+e+k ke+ 
  MMETSP1325-20131115|544_1  14 ENLLRIFTRIRESTWLKNTQGEKdeegEEDEDEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKR 89 
                6788888888988888887777655455555566666666666666555554444444444444455555555443 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  20.3     0.002       1.5     149     244 ..      29      90 ..      10     129 .. 0.48

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.002
  PF09073.5 149 kekkkkkkkkkkkkkedesedkdeeessesedssddeeseeddsdsdeeeesdse..dlsqydallvsssdeesgeeqdesddeeesesesesdeede 244
                 ++ +++k+++ +++ede+ed+de+e++++++ + +ee+e++d+d+de+ee+d+   +                                    e+ e
  MMETSP1325-20131115|544_1  29 LKNTQGEKDEEGEEDEDEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDENkdK------------------------------------EKRE 90 
                4444444444444444443444444333333333333333333333333333332211....................................1111 PP

>> PF14181.1  YqfQ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   8.3   0.00058      0.44     101     147 ..      45      91 ..      16     122 .. 0.51
   2 ?   -2.9   0.0         7   5.4e+03      42      69 ..     226     252 ..     201     254 .. 0.53

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00058
  PF14181.1 101 eteeeeeesteeeekeeeeetktekkekkkkevkkskkekekekeek 147
                +++e+e+e +ee e e+e+e+++e +++ ++e++++ ++k kek+e+
  MMETSP1325-20131115|544_1  45 DEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKREE 91 
                12222222222222222222222222222222222222222222222 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 7
  PF14181.1  42 gsfisnlaspanltsmLnNvqkvlgvaQ 69 
                g++     s  +  +  + vq++   aQ
  MMETSP1325-20131115|544_1 226 GNANGTGKS-DSCRQSTDDVQQMFTAAQ 252
                332222222.444555556666666666 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  20.5     0.004         3     364     427 ..      35      92 ..       6     106 .. 0.43

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.004
  PF03985.8 364 kfdpiefeevdedeeeeeeqrseeeeeeeeedeeeeeseeeeeleskeksadeessdeeskadk 427
                + d+ ++e++dede+e+e+++++e+e e+ee++e+e+++e+e++e++e      ++d+e++++ 
  MMETSP1325-20131115|544_1  35 EKDEEGEEDEDEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDE------NKDKEKREED 92 
                223333333333333333322222222222222222222222222222......2222222221 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  24.3    0.0054       4.1     206     263 ..      37      95 ..       5     110 .. 0.52

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0054
  PF06213.7 206 lelaeelgdeeessdseekrd.edddkedeeddaseeeesgdsdslskdedasseetes 263
                 e+ ee  de+e++d++e++d ++d++e+e++d+ e+e++++++ ++kd+++ +e+t  
  MMETSP1325-20131115|544_1  37 DEEGEEDEDEDEDEDEDEEEDeDEDENEEEDEDEDEDEDENEEEDENKDKEKREEDTPT 95 
                33444444444444444444323344444444444445555555555555555544433 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  15.0    0.0075       5.7      17      83 ..      26      92 ..      11     109 .. 0.57

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0075
  PF03896.11 17 avlllvgavkklaasaqdltedeeaeddvvdedeedeaeveedekteaeeeedeeeagevkaspdad 83
                ++ l  ++++k+++ ++d  ede+ ++d++++++ede e+e++++ e e+e++ee++++ k++ + d
   MMETSP1325-20131115|544_1 26 STWLKNTQGEKDEEGEEDEDEDEDEDEDEEEDEDEDENEEEDEDEDEDEDENEEEDENKDKEKREED 92
                5556566667777777777777766666666666666555554444433333333333344444444 PP

>> PF04006.7  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  26.0    0.0089       6.8     103     166 ..      29      93 ..       5     111 .. 0.40

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0089
  PF04006.7 103 eedgsdeseedeedeaddeeeeeelEeee.mldeadleeveesseeelsdeeeeddeeekmeeea 166
                 ++ + e++e++e+++d++e+e e+Eee+   de+++e+++e++ e++++ee+e++++ek ee +
  MMETSP1325-20131115|544_1  29 LKNTQGEKDEEGEEDEDEDEDEDEDEEEDeDEDENEEEDEDEDEDEDENEEEDENKDKEKREEDT 93 
                33333333333333333332333323333011223333334444443443333333333333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1000  (0.0731422); expected 273.4 (0.02)
Passed bias filter:                      536  (0.0392042); expected 273.4 (0.02)
Passed Vit filter:                       208  (0.0152136); expected 13.7 (0.001)
Passed Fwd filter:                        80  (0.00585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 1.63u 0.39s 00:00:02.02 Elapsed: 00:00:01.11
# Mc/sec: 984.45
//
Query:       MMETSP1325-20131115|548_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.097   12.2   0.0       0.12   11.8   0.0    1.1  1  PF07747.6 MTH865-like family


Domain annotation for each model (and alignments):
>> PF07747.6  MTH865-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   9.1e-06      0.12       7      32 ..      27      52 ..      24      56 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.1e-06
  PF07747.6  7 lvdalkgadfPiknkeeLvaALPsGi 32
               l d + g d+P+k   +L+ A P+G 
  MMETSP1325-20131115|548_1 27 LRDDFDGTDYPLKIVPGLAVAWPNGR 52
               56899*******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.71
# Mc/sec: 199.13
//
Query:       MMETSP1325-20131115|546_1  [L=419]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.56
# Mc/sec: 1792.99
//
Query:       MMETSP1325-20131115|551_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-06   27.0   0.0    5.4e-06   26.2   0.0    1.3  1  PF08546.6 Ketopantoate reductase PanE/ApbA C terminal


Domain annotation for each model (and alignments):
>> PF08546.6  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   3.9e-10   5.4e-06      15     122 ..      54     184 ..      44     187 .. 0.80

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 3.9e-10
  PF08546.6  15 ainpltalldctngellespelralvralmdEalavakaeg.....................va.lseeeleeevarvarktaan.ksSMlqDveagrktEidyinGyvvklakklgvetPvnellyelvk 122
                ++ +++al++ + +  l+ ++ r +++++++E l+ ++a+                       a + ++ +   ++ v+ ++a+   s M+ D+ a+r t   + + ++++ ++k+ v++P+ + +  l+k
  MMETSP1325-20131115|551_1  54 TVLATNALTGGSLQSHLRVRKNRLVYAQMIRESLQAFTAASkggkwepdgaaagpfslkmleLAlCLPTFIFVPLTYVLVSHAPGaGSPMQADLHARRSTSFGWSISELCDVGRKHSVPMPAVKSVRTLLK 184
                67899********************************77776666666666665655555553334444366666666666555449*************************************9999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.59
# Mc/sec: 995.10
//
Query:       MMETSP1325-20131115|552_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1228  (0.0898186); expected 273.4 (0.02)
Passed bias filter:                      430  (0.0314511); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.44s 00:00:00.94 Elapsed: 00:00:00.67
# Mc/sec: 618.76
//
Query:       MMETSP1325-20131115|553_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-28   97.5   5.6    3.5e-28   96.9   3.9    1.3  1  PF00957.16 Synaptobrevin
    6.4e-19   67.1   0.2    1.3e-18   66.2   0.0    1.6  2  PF13774.1  Regulated-SNARE-like domain
  ------ inclusion threshold ------
      0.046   12.5   0.2      0.074   11.8   0.1    1.3  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   3.9   7.8e-32   3.5e-28       2      89 .]     145     232 ..     144     232 .. 0.98

  Alignments for each domain:
  == domain 1    score: 96.9 bits;  conditional E-value: 7.8e-32
  PF00957.16   2 ndklskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklkrkmwwknmklliililvvlililiiiivicg 89 
                 nd ++++++++d vk++m +Nid ++ergek+d+Lvdkte++q++aqqFkk++++lk   w+k+mk+++++++ v+++i+i+ +++cg
   MMETSP1325-20131115|553_1 145 NDATAAAQKKLDAVKNVMVQNIDLIMERGEKMDLLVDKTEQMQANAQQFKKTSQQLKDTLWCKKMKIYALMTFAVIFVIMILSMFLCG 232
                 788999*******************************************************************************996 PP

>> PF13774.1  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.0   2.8e-22   1.3e-18       2      82 ..      52     131 ..      51     132 .. 0.90
   2 ?   -3.2   0.0       1.2   5.6e+03       6      37 ..     193     222 ..     190     224 .. 0.62

  Alignments for each domain:
  == domain 1    score: 66.2 bits;  conditional E-value: 2.8e-22
  PF13774.1   2 akqilkklppnspqklsyesgn.yvfhylvedglvylvvadksyprrlafafLeeikreFlstyggsqiesaspyaf.aeFdt 82 
                + +il k++p++   ++y +++ y fhy+ve  l++l++ad++  rr++f fL++ik++F++tyg +++++a + ++ ++F +
  MMETSP1325-20131115|553_1  52 TNTILNKIKPED-GSMTYVYDEkYAFHYIVEGRLTFLCMADAE-KRRIPFVFLDDIKNKFIATYG-DRAQTALALSMnEDFGR 131
                679******766.6999997777******************88.8*******************7.789***9***9888876 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 1.2
  PF13774.1   6 lkklppnspqklsyesgnyvfhylvedglvyl 37 
                +kk++ ++  k ++ ++++ ++ l+   ++++
  MMETSP1325-20131115|553_1 193 FKKTS-QQ-LKDTLWCKKMKIYALMTFAVIFV 222
                55666.55.47777777777777776666666 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   1.6e-05     0.074      12     107 ..      86     204 ..      81     214 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.6e-05
  PF10186.4  12 flCatCirn.............r...Llelrlrlanlkaeketlkkkveealeeaene.......kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdl 107
                flC +++ +             +    +  r ++a  ++ +e++++ v+++++  ++        +++++++ k+  ++  + i +  +++++l +++eq +++ ++ k++ +q++ +l
  MMETSP1325-20131115|553_1  86 FLCMADAEKrripfvflddiknKfiaTYGDRAQTALALSMNEDFGRTVKKTMDYYNDPandataaAQKKLDAVKNVMVQNIDLIMERGEKMDLLVDKTEQMQANAQQFKKTSQQLKDTL 204
                56666665555555554444432444666777777888888888888888887555557777777555555555555555555555555555555555555555555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1519  (0.111103); expected 273.4 (0.02)
Passed bias filter:                      844  (0.061732); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.44s 00:00:01.10 Elapsed: 00:00:00.85
# Mc/sec: 696.35
//
Query:       MMETSP1325-20131115|554_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-46  158.3   0.1    1.9e-46  157.8   0.0    1.2  1  PF07162.6 Ciliary basal body-associated, B9 protein


Domain annotation for each model (and alignments):
>> PF07162.6  Ciliary basal body-associated, B9 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.8   0.0   1.4e-50   1.9e-46       2     167 ..      18     189 ..      17     190 .. 0.96

  Alignments for each domain:
  == domain 1    score: 157.8 bits;  conditional E-value: 1.4e-50
  PF07162.6   2 vfviGeiesAegfeednlfvryelvlgpdwkllsges..lsgvtqtarskelknddvav....fshpfdlelkttnpkgwPqLvvtvlsldswgrerleGYgyvevPlkpgkheitvplwrpvssslveklrsfflGgspeledksilasgldrfglktestGsVklrlnvi 167
                ++++G++es+  + +dnl+++y++ +g+dw++++g +   +g +q+a++ + ++d++      +++p+d+++k+tn +gwP++ +tv+++d++gr++++GYg + vP++pg++  ++++++p++ss+++++ + ++G +pe+ d +++a+g++r+++++estGsV ++++++
  MMETSP1325-20131115|554_1  18 LMITGQVESGDFYGADNLYCKYSFSYGHDWTVVTGLDgvTAGLSQIAKKGSAGMDNTFGgsvvWNFPIDVAFKSTNAFGWPRVSFTVYGIDALGRDKTYGYGSMLVPTQPGHYVKEIEMYAPMPSSWYQRILNSITGTYPEFFDTKFVAQGSNREVTRVESTGSVRVQVQIA 189
                689******************************9999999***********999886557777*********************************************************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.41s 00:00:00.94 Elapsed: 00:00:00.66
# Mc/sec: 871.40
//
Query:       MMETSP1325-20131115|556_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.089   12.7   0.0       0.11   12.4   0.0    1.2  1  PF00300.17 Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.2e-06      0.11     118     157 ..      16      57 ..       2      58 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.2e-06
                 SS.CHHHHHHHHHHHHHHHHH.HCTTTSEE.EEEE-TTHHHH CS
  PF00300.17 118 egesladvyeRvapfleelie.akdkgenv.livsHggvlra 157
                 + e ++ v +R ++f+ el e + d +  + l+vsHg  l+ 
   MMETSP1325-20131115|556_1  16 GVEPVQSVLDRSTRFVSELEEhHVDIEPALiLLVSHGDLLQI 57 
                 668999**************95444444448******99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.70
# Mc/sec: 280.72
//
Query:       MMETSP1325-20131115|557_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.65
# Mc/sec: 729.97
//
Query:       MMETSP1325-20131115|558_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.65
# Mc/sec: 534.57
//
Query:       MMETSP1325-20131115|559_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-14   50.9   0.2    1.2e-13   50.3   0.1    1.3  1  PF02209.14 Villin headpiece domain
      0.002   18.0   0.4      0.027   14.3   0.0    2.1  2  PF09286.6  Pro-kumamolisin, activation domain


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.1   1.8e-17   1.2e-13       1      36 []     138     173 .]     138     173 .] 1.00

  Alignments for each domain:
  == domain 1    score: 50.3 bits;  conditional E-value: 1.8e-17
                 GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT-- CS
  PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgLF 36 
                 YLsde+F+ +F+M++++ ++LPaWK + +K k+gLF
   MMETSP1325-20131115|559_1 138 YLSDEEFQATFKMSRSALAALPAWKVKGMKQKAGLF 173
                 9*********************************** PP

>> PF09286.6  Pro-kumamolisin, activation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.028   1.9e+02      93     120 ..      34      60 ..      29      87 .. 0.78
   2 !   14.3   0.0   3.9e-06     0.027      10      70 ..     103     161 ..      96     168 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.028
  PF09286.6  93 tveqaerlLktsfeayshkdggsslart 120
                t + ae+++ +++e+ys+ +g + +a t
  MMETSP1325-20131115|559_1  34 TKAAAEKVMAAEMEHYSK-AGVVGMAGT 60 
                678899**********94.444444444 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 3.9e-06
  PF09286.6  10 apsell.pvriaLkqrnlekledfledvsdPkspnygkhltaeevaelfapseetidaVraw 70 
                +p++ + +v++ L q +++   ++l++  dP++    ++l+ ee++++f+ s+++++a+ aw
  MMETSP1325-20131115|559_1 103 PPHADIgSVTLSLEQLKVS-AAELLQQGLDPSKR--EQYLSDEEFQATFKMSRSALAALPAW 161
                6677776799999999955.55667777899888..9*********************9999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       757  (0.0553686); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.44s 00:00:00.93 Elapsed: 00:00:00.77
# Mc/sec: 538.40
//
Query:       MMETSP1325-20131115|560_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-42  145.7   0.0    8.5e-42  143.1   0.0    1.9  1  PF00454.22 Phosphatidylinositol 3- and 4-kinase


Domain annotation for each model (and alignments):
>> PF00454.22  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.1   0.0   6.2e-46   8.5e-42      12     232 ..       1     329 [.       1     332 [. 0.82

  Alignments for each domain:
  == domain 1    score: 143.1 bits;  conditional E-value: 6.2e-46
                 HHHHHHHHHHHHHHHHHHHCTT---------B--SSS----EE--TTEEEHHHHHCH--------T...................................................THHHHHHHHHSSSHHHHHH........................................................................................................HHHHHHHHH---HHHHHH-------CCCEEE.E----EEE--------...----SSSS--SS---HHHHHH-------SHHHHHHHHHHHHHHHHHHCTHHHHHHHHHCCCCS--CC CS
  PF00454.22  12 lrqdervlqlvrlfnkllsgegalrelaaYlviplasksglielvdsaltlaevprtdlvkkesknfndkrkkkvkl..............................felqkkkkpkvgslqlFlkeypdaeefle........................................................................................................arsqfarslaklsvldyilgngDRhldNilvdkktgklvhIDfGlclp...skheekpelvpfrltrpfseemreyldpskdeglfresceeilealrrdqdlltrlLqafveigllk 232
                 lrqd ++lq++r++++l+++ g+++ ++aY ++++a++ g++e+v+++ tla + + ++ + + k+ ++  + kv++                                                          +                                                                                                        ++++f+ s+a+++v++++lg+gDRh+dNi++ +++g l+hIDfG++l+   sk++ k+e+ pf++t+ f  ++++  d+ + +  f+e+c++++ +lrr+ +l+++l++++v+ g+++
   MMETSP1325-20131115|560_1   1 LRQDLLTLQVLRIMDNLWKKAGLDLCMSAYGCVATAPEEGMLEVVPNSNTLAGIVKDHVEEVGGKAAKSGWNRKVRSarealygsdavlkwleaqaakmpppkkgkkG---------------------------AkgksrtrtlqaqsinksgsmddaayssqtaprdssrsrgsagkrlaegmsmnaasvangsgggvggsggglsaspppigspgrpvsnrgfamdnplmqgsnlvqTLDNFRNSCAGYCVATFVLGIGDRHNDNIML-TQDGCLFHIDFGHFLGnfkSKFGVKRETAPFVFTKHFETVLGG-QDEGGRFRQFEELCCRAFLVLRRHVNLMLALFSLMVDCGIPE 329
                 79********************************************************99999888664444444435555555555555555444444444444330...........................144444444445556666666666667777777777777778888888888888888888888888888888888888888888888888888888888888888*******************************.****************************************944.9*************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.41s 00:00:01.11 Elapsed: 00:00:00.66
# Mc/sec: 1383.35
//
Query:       MMETSP1325-20131115|561_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-20   71.4   0.1    8.5e-20   71.1   0.0    1.1  1  PF00728.17 Glycosyl hydrolase family 20, catalytic domain
  ------ inclusion threshold ------
       0.03   13.6   0.0       0.12   11.7   0.0    2.0  1  PF03640.10 Secreted repeat of unknown function


Domain annotation for each model (and alignments):
>> PF00728.17  Glycosyl hydrolase family 20, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.0   1.2e-23   8.5e-20     163     349 ..       1     171 [.       1     172 [. 0.84

  Alignments for each domain:
  == domain 1    score: 71.1 bits;  conditional E-value: 1.2e-23
                 ----.....TTS-..HHHHHH............HHHHHHHHHHH.---EEE--GGG-----....---.---EE---TTHHHHHHHHH.H-----EE--TTTS-TTS-SS.TT------------HHHHHS---------....--GGG...----EEEE--TT--SHHHHHHHHTTT----------- CS
  PF00728.17 163 gDEvkkkqwkkspkiqafikqeglksleelqsyfikrvekivkk.rgkkligWeeilekkeaaklakeevtvqsWrnveqeeqaekla.nkgykvilspadalYldlgqekrpeeeglewagfmslkkvyewepvaktaaatsaapeekkknvlGgeaalWgEnikdeenleyrlfprllalAeraWsk 349
                 gDE+k+k+++ +++  ++ + +g  +  +   yf++   ++v++  g+k+i+W++  ++++++ ++++  t ++W++   +eq +k+a + g+kvi +++  lYl lg+  +++ +++         ++ ++e+++  ++      +e+ +nvlG++ a W+    d++nl   lfpr++  Aer+Ws+
   MMETSP1325-20131115|561_1   1 GDEAKTKCYEADNATVEWCALKG-MNASSVWPYFVNTNAQMVSElFGRKPIAWNDAYTDDGNDAMDPS-LTFMWWTTPDYGEQFRKCAtEDGHKVIAASGHPLYLSLGEYGNNAIYEY---------DPCDCENLNCVNT------TEGCENVLGMSTAFWTSDF-DASNLLGALFPRAIVSAERMWSS 171
                 9******************9988.67999999**999999998846999***********95555555.*******988666666655499***************999977764443.........4555555555533......333379*************.9********************97 PP

>> PF03640.10  Secreted repeat of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.8e-05      0.12       5      22 ..      86     103 ..      83     103 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.8e-05
  PF03640.10   5 trddGkklvdkkGmtLYt 22 
                 +++dG k+ ++ G++LY+
   MMETSP1325-20131115|561_1  86 ATEDGHKVIAASGHPLYL 103
                 799**************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.65
# Mc/sec: 847.94
//
Query:       MMETSP1325-20131115|563_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   13.5   0.0      0.037   12.9   0.0    1.2  1  PF08381.6 Transcription factor regulating root and shoot growth via Pin3


Domain annotation for each model (and alignments):
>> PF08381.6  Transcription factor regulating root and shoot growth via Pin3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.7e-06     0.037       9      37 ..       3      31 ..       1      35 [. 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.7e-06
  PF08381.6  9 qvEpGVyitlvtlpdGtkeLKrvrFSrkr 37
               +  +GV++ + + ++G  +L+ v+ Sr r
  MMETSP1325-20131115|563_1  3 ENANGVLVQVFSIANGALQLRQVHLSRVR 31
               5679***********************77 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.63
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|564_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.72
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|562_1  [L=334]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.68
# Mc/sec: 1177.03
//
Query:       MMETSP1325-20131115|565_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.60
# Mc/sec: 375.43
//
Query:       MMETSP1325-20131115|566_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00021   21.0   0.0    0.00021   21.0   0.0    1.1  1  PF00881.19 Nitroreductase family


Domain annotation for each model (and alignments):
>> PF00881.19  Nitroreductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.5e-08   0.00021      22      55 ..       2      34 ..       1      50 [. 0.82

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 1.5e-08
  PF00881.19 22 kileaarlaPsagnlqpwrfvvitdeelkerlak 55
                + leaa laP+++ ++pwrf+ +  +e+k++l  
   MMETSP1325-20131115|566_1  2 RALEAAILAPNHFLSEPWRFYTC-GPETKAKLCG 34
                579********************.8999977754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 214.85
//
Query:       MMETSP1325-20131115|568_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.65
# Mc/sec: 733.65
//
Query:       MMETSP1325-20131115|550_1  [L=632]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   12.6   0.1       0.17   11.7   0.0    1.3  1  PF08512.7 Histone chaperone Rttp106-like


Domain annotation for each model (and alignments):
>> PF08512.7  Histone chaperone Rttp106-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.2e-05      0.17      36      76 ..     379     418 ..     359     430 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.2e-05
  PF08512.7  36 ediesvefeRvsssssrtfdlvvtlkdegkelefsmIdkee 76 
                 d   vef+  + +s+rtf ++v+ +d+++e+ fs++d +e
  MMETSP1325-20131115|550_1 379 GDTFNVEFAY-TAGSGRTFEIEVKSDDGKTEYGFSSMDLTE 418
                4567789976.6*************8889********9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.98u 0.36s 00:00:01.34 Elapsed: 00:00:00.85
# Mc/sec: 1781.76
//
Query:       MMETSP1325-20131115|569_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-05   23.5   0.3      0.021   14.9   0.1    2.3  2  PF13646.1  HEAT repeats
      0.002   17.9   0.2       0.11   12.5   0.1    2.7  2  PF02985.17 HEAT repeat


Domain annotation for each model (and alignments):
>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   3.1e-06     0.021      23      84 ..      66     131 ..      60     134 .. 0.72
   2 !   11.3   0.0   4.3e-05      0.29       5      58 ..     116     172 ..     112     179 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.1e-06
  PF13646.1  23 aLgqlgseealpaLlelLkdsdpevRraAaeaL.....gklgdpealpaLlklldddedavvreaaa 84 
                aL  +++ e  + +l+lL++s+++vR aA+e +     g  +d+e +   +++ d d d  vr +++
  MMETSP1325-20131115|569_1  66 ALRLCRETEDFDDILRLLSHSSARVRVAALEQIcpcklGSHDDDEIWMKVIQMVD-DGDLGVRKQVL 131
                6777788888889999999999999999999774433345557888888888664.56777777665 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 4.3e-05
  PF13646.1   5 laaLekdpdpevraaaieaLg...qlgseealpaLlelL.kdsdpevRraAaeaLgkl 58 
                ++ + +d d  vr +++++L+     ++e+a+ + +e+  + sd ++Rr+A ++L+ +
  MMETSP1325-20131115|569_1 116 IQMV-DDGDLGVRKQVLHTLCdgsPPRHERAVVEAVEVFnRESDRDLRRMAHKVLASY 172
                6777.9***************54422344555555555547899*******9999865 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.1   1.6e-05      0.11       5      24 ..      79      98 ..      77     101 .. 0.90
   2 ?    2.6   0.0     0.025   1.7e+02       6      25 ..     116     135 ..     114     136 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.6e-05
                HHHHHTSSSHHHHHHHHHHH CS
  PF02985.17  5 llkllnDpspeVReaAaeaL 24
                +l+ll+++s++VR aA+e +
   MMETSP1325-20131115|569_1 79 ILRLLSHSSARVRVAALEQI 98
                799*************9976 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.025
                 HHHHTSSSHHHHHHHHHHHH CS
  PF02985.17   6 lkllnDpspeVReaAaeaLg 25 
                 +++  D +  VR++++ +L+
   MMETSP1325-20131115|569_1 116 IQMVDDGDLGVRKQVLHTLC 135
                 7889999999******9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.65
# Mc/sec: 667.29
//
Query:       MMETSP1325-20131115|572_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-19   67.1   0.1    9.1e-19   66.8   0.1    1.2  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
    4.6e-06   25.7   0.1    6.8e-06   25.1   0.0    1.4  1  PF00240.18 Ubiquitin family
  ------ inclusion threshold ------
      0.059   12.2   0.0      0.072   11.9   0.0    1.1  1  PF09570.5  SinI restriction endonuclease
      0.061   12.1   0.1      0.069   11.9   0.1    1.1  1  PF02942.9  Influenza B non-structural protein (NS1)
      0.073   11.8   0.0      0.084   11.6   0.0    1.1  1  PF05673.8  Protein of unknown function (DUF815)


Domain annotation for each model (and alignments):
>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   0.1   3.3e-22   9.1e-19       1      71 [.      31     100 ..      31     101 .. 0.98

  Alignments for each domain:
  == domain 1    score: 66.8 bits;  conditional E-value: 3.3e-22
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE CS
  PF11976.3   1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvv 71 
                i+i +++++g+e ++kVk++t+++k+ + y+++kg++   ++r++ DGer++p++ +++ld+ed+d+id +
  MMETSP1325-20131115|572_1  31 ITIRVRDQTGEETFFKVKKSTRFEKVFSTYAQRKGVNV-GSLRFLIDGERINPQQSPAELDMEDQDQIDCM 100
                7899**********************************.******************************87 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   2.5e-09   6.8e-06       6      68 ..      39     103 ..      24     104 .. 0.92

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 2.5e-09
                 E..EEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEESS CS
  PF00240.18   6 k..titlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlrl 68 
                    ++ ++v++s+  +++   +++++g+ v ++r++ +G ++  +++ +e++++d++++ ++l++
   MMETSP1325-20131115|572_1  39 TgeETFFKVKKSTRFEKVFSTYAQRKGVNVGSLRFLIDGERINPQQSPAELDMEDQDQIDCMLEQ 103
                 344889*****************************************************999886 PP

>> PF09570.5  SinI restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.6e-05     0.072     150     207 ..      25      82 ..      17      89 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.6e-05
  PF09570.5 150 edewlslqvknrdntenssssairdgtpikkwfrtfskkdktnwdnlpdevskkdlne 207
                e++ +++ ++ rd t + +  +++++t  +k f t++++++ n   l   ++++ +n 
  MMETSP1325-20131115|572_1  25 EEKGETITIRVRDQTGEETFFKVKKSTRFEKVFSTYAQRKGVNVGSLRFLIDGERINP 82 
                566678999**********************************998888877777765 PP

>> PF02942.9  Influenza B non-structural protein (NS1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   2.5e-05     0.069     127     195 ..      14      81 ..       7      99 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.5e-05
                XXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF02942.9 127 kylddieeep..edvddpieivlrdmnnkdarqkikeevntqkegkfrltikrdirnvlslrvlvngtflk 195
                k + d ee+p  e+  + i i +rd    ++  k+k+   t+ e  f    +r   nv slr l++g  ++
  MMETSP1325-20131115|572_1  14 K-MADEEEKPktEEKGETITIRVRDQTGEETFFKVKK--STRFEKVFSTYAQRKGVNVGSLRFLIDGERIN 81 
                4.45567777335667788888999999999999997..5788889********************98764 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.1e-05     0.084     149     216 ..       5      69 ..       2      84 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 3.1e-05
  PF05673.8 149 sNrRhLlpeklsdneeleedeihasdaveeklsLsdRFGltlgFhkldqdeYleivkklakklglele 216
                s +RhL+p+k++d+ee + ++ ++++++   + + d  G    F+  + +++ ++ +++a++ g+++ 
  MMETSP1325-20131115|572_1   5 SRQRHLVPQKMADEEE-KPKTEEKGETIT--IRVRDQTGEETFFKVKKSTRFEKVFSTYAQRKGVNVG 69 
                789**********999.444445666664..6668999999999999999999999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.70
# Mc/sec: 366.30
//
Query:       MMETSP1325-20131115|571_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-19   68.8   0.0    2.2e-19   68.6   0.0    1.0  1  PF03259.12 Roadblock/LC7 domain


Domain annotation for each model (and alignments):
>> PF03259.12  Roadblock/LC7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.6   0.0   1.6e-23   2.2e-19       2      90 ..      16     106 ..      15     107 .. 0.98

  Alignments for each domain:
  == domain 1    score: 68.6 bits;  conditional E-value: 1.6e-23
  PF03259.12   2 aeellellqrvpgvrgalvvskdGlvlas.stldnddadrlAalasgllaaakalarelg.egelkelliegkkgelyltpagegalLvvl 90 
                 +ee+le+++  +gv+g ++ ++ Glvl++  +++++ a+++A  + +l+++a++++r+l+ ++el++l+i+ k++e++++  +e++++v++
   MMETSP1325-20131115|571_1  16 VEETLERVKVQNGVEGYVICNRQGLVLRRfPQMSQEHAEQYADSMRHLANKARGVVRDLNpQNELRYLRIRAKRHEVMIAFDNEFLVIVIQ 106
                 799*********************************************************************************9999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       466  (0.0340843); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.45s 00:00:00.84 Elapsed: 00:00:00.59
# Mc/sec: 463.02
//
Query:       MMETSP1325-20131115|574_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.63
# Mc/sec: 262.46
//
Query:       MMETSP1325-20131115|575_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 488.31
//
Query:       MMETSP1325-20131115|573_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0029   17.7   0.0       0.17   11.9   0.0    2.3  2  PF13385.1 Concanavalin A-like lectin/glucanases superfamily


Domain annotation for each model (and alignments):
>> PF13385.1  Concanavalin A-like lectin/glucanases superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.6   0.0    0.0046        64      24      73 ..     101     154 ..      74     174 .. 0.66
   2 !   11.9   0.0   1.3e-05      0.17     134     156 ..     205     227 ..     161     228 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.0046
                E....EEEEEEEE-S-----EE-------------EE.ETTSEEE------.... CS
  PF13385.1  24 f....TisaWvkpdslargqrlligassgengwglgl.dgggklrftvgggggkg 73 
                f    T+ + vk + +++  + l+ + + e  +++++ dgg+++r  ++++g++ 
  MMETSP1325-20131115|573_1 101 FipvkTVVMVVKHTRPPSPCQMLF-GEAMESDFSVRVgDGGNGYRRGGNTDGNDF 154
                26666999******9998644455.234455999999555557776666666543 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 1.3e-05
                -----EEEEEEEEESS---HHHH CS
  PF13385.1 134 drpfnGtidevriynraLsaaei 156
                dr+f+G + ev +++r L+  e+
  MMETSP1325-20131115|573_1 205 DRGFEGLMGEVLVFDRELTTVEV 227
                899*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.71
# Mc/sec: 945.04
//
Query:       MMETSP1325-20131115|579_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.65
# Mc/sec: 438.72
//
Query:       MMETSP1325-20131115|580_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-09   38.0   0.0    2.8e-08   33.8   0.0    2.1  2  PF12796.2  Ankyrin repeats (3 copies)
    1.7e-07   30.5   0.0    0.00031   20.2   0.0    3.4  3  PF00023.25 Ankyrin repeat
    4.8e-06   26.1   0.0    0.00085   19.2   0.0    2.7  2  PF13606.1  Ankyrin repeat
    5.1e-05   23.2   0.0     0.0012   18.9   0.0    2.5  2  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.032   14.6   0.0       0.14   12.5   0.0    2.1  2  PF13637.1  Ankyrin repeats (many copies)
       0.36   10.6   2.4       0.24   11.2   0.4    1.7  2  PF06493.6  Protein of unknown function (DUF1096)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   1.2e-11   2.8e-08      25      69 ..      30      79 ..       2      86 .. 0.78
   2 ?    2.3   0.0     0.083   1.9e+02      37      55 ..     162     180 ..     106     209 .. 0.73

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 1.2e-11
  PF12796.2 25 l.....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrn 69
               +     ++t+L++Aa  g  e+ +lLl +gadv+  ++ g+tpL +Av++
  MMETSP1325-20131115|580_1 30 WtdhgrRSTALSWAAYLGFPEMTSLLLRRGADVDKASMAGMTPLLWAVSQ 79
               155666778***************************************86 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.083
  PF12796.2  37 gnleivklLleagadvnak 55 
                +  e+++ Ll++ga+  a+
  MMETSP1325-20131115|580_1 162 DECECAQRLLASGASTMAT 180
                3448888888888876554 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   1.3e-07   0.00031       4      30 ..      38      64 ..      36      66 .. 0.95
   2 ?    4.4   0.0     0.014        33       2      11 ..      69      78 ..      68      79 .. 0.90
   3 ?    1.5   0.0      0.12   2.7e+02      16      30 ..     165     179 ..     160     181 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 1.3e-07
                BHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25  4 TPLHlAalrgnlevvklLlsqGAdlna 30
                T+L +Aa+ g +e+ +lLl +GAd++ 
   MMETSP1325-20131115|580_1 38 TALSWAAYLGFPEMTSLLLRRGADVDK 64
                9************************85 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.014
                SCBHHHHHHH CS
  PF00023.25  2 GfTPLHlAal 11
                G+TPL +A++
   MMETSP1325-20131115|580_1 69 GMTPLLWAVS 78
                9*******96 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.12
                 HHHHHHHHTTSSTTH CS
  PF00023.25  16 evvklLlsqGAdlna 30 
                 e+++ Ll  GA+  a
   MMETSP1325-20131115|580_1 165 ECAQRLLASGASTMA 179
                 7999*******9876 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   3.7e-07   0.00085       4      30 .]      38      64 ..      33      64 .. 0.93
   2 ?    4.1   0.0     0.028        65       2      12 ..      69      79 ..      68      86 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 3.7e-07
  PF13606.1  4 TpLhlAasngrielveaLlengadina 30
               T+L +Aa+ g +e+ ++Ll++gad+++
  MMETSP1325-20131115|580_1 38 TALSWAAYLGFPEMTSLLLRRGADVDK 64
               9***********************985 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.028
  PF13606.1  2 GnTpLhlAasn 12
               G TpL +A+s+
  MMETSP1325-20131115|580_1 69 GMTPLLWAVSQ 79
               99*******97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   5.2e-07    0.0012      14      56 .]      34      76 ..      25      76 .. 0.86
   2 ?    1.4   0.0      0.16   3.7e+02      30      55 ..     165     190 ..     161     190 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 5.2e-07
  PF13857.1 14 eggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
               ++++t+L +Aa+ g +e+  lLl++gad +     g t+l +A
  MMETSP1325-20131115|580_1 34 GRRSTALSWAAYLGFPEMTSLLLRRGADVDKASMAGMTPLLWA 76
               3344***********************************9766 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.16
  PF13857.1  30 evvrlLlapgadlnlrdsdgltaldl 55 
                e+++ Lla ga++ ++ ++   ++dl
  MMETSP1325-20131115|580_1 165 ECAQRLLASGASTMATCTSSYGPVDL 190
                899**********9999988888885 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.3e-05      0.14       2      43 ..      37      78 ..      36      82 .. 0.93
   2 ?   -1.9   0.0       2.2   4.9e+03      15      27 ..     165     179 ..     165     196 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.3e-05
  PF13637.1  2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAal 43
                taL +aa+ g  e+  lLl +g+d+++    G+t+L  A++
  MMETSP1325-20131115|580_1 37 STALSWAAYLGFPEMTSLLLRRGADVDKASMAGMTPLLWAVS 78
               699*****************99*******999******9995 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 2.2
  PF13637.1  15 elvklLlekgid..i 27 
                e+++ Ll++g++   
  MMETSP1325-20131115|580_1 165 ECAQRLLASGAStmA 179
                578899999887543 PP

>> PF06493.6  Protein of unknown function (DUF1096)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.7   6.1e+03      31      39 ..      81      89 ..      77      93 .. 0.54
   2 ?   11.2   0.4   0.00011      0.24       2      17 ..     154     169 ..     153     187 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.7
  PF06493.6 31 qqqsCsCqs 39
               q +s sC +
  MMETSP1325-20131115|580_1 81 QDDSGSCWQ 89
               345556644 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00011
  PF06493.6   2 asvlRekRqsCgCaqp 17 
                + + R++R  C+Caq+
  MMETSP1325-20131115|580_1 154 NLIERDRRDECECAQR 169
                6788**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.61
# Mc/sec: 836.76
//
Query:       MMETSP1325-20131115|567_1  [L=1214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-46  157.3   0.1    2.8e-26   92.0   0.0    2.3  2  PF00009.22 Elongation factor Tu GTP binding domain
    2.6e-13   49.4   0.0    7.9e-13   47.9   0.0    1.7  1  PF03764.13 Elongation factor G, domain IV
    4.9e-12   45.4   0.0    1.1e-11   44.2   0.0    1.6  1  PF00679.19 Elongation factor G C-terminus
    4.7e-08   32.9   0.7    1.5e-07   31.3   0.5    1.9  1  PF03144.20 Elongation factor Tu domain 2
  ------ inclusion threshold ------
       0.14   11.6   0.1       0.31   10.5   0.0    1.6  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.3   8.8e-21   2.4e-17       3      65 ..      67     136 ..      65     170 .. 0.81
   2 !   92.0   0.0     1e-29   2.8e-26      46     176 ..     344     516 ..     310     619 .. 0.78

  Alignments for each domain:
  == domain 1    score: 62.8 bits;  conditional E-value: 8.8e-21
                 EEEEEEEESTT---HHHHHHHHHHCCCCEHHHHHHHC-..HHHCCHHHH---BBSSEEEEEE.........T CS
  PF00009.22   3 irnigiighvDhGKtTltdallykagaiskrgeeaegerlldklkeerergiTiksaaisle.........k 65 
                 +rni++i+hvDhGKtT++d+ll+k+g  ++  ++a+++ +ld+ +ee+ergiTi+s+a+s++         +
   MMETSP1325-20131115|567_1  67 TRNISVIAHVDHGKTTICDSLLAKSGLLNR--KKAGTACALDTSAEEQERGITIHSTAVSMTfkmpsellqQ 136
                 79************************9988..55666888*********************97666655441 PP

  == domain 2    score: 92.0 bits;  conditional E-value: 1e-29
                 CCHHHH---BBSSEEEEEE............T..ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-S-HHHHHHHHHHHHTT--EEEEEE-TTSTCHHHHHHHHHHHHHH............................HHHCTTGCT........CGEEEEEE-STCCHHHH CS
  PF00009.22  46 lkeerergiTiksaaisle............k.etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqTeevlrlakklgvkiivviNKiDrveaeleeiveelkekl............................lekylekge........eevpvvpgSalkgegid 176
                 +++e e   T   + +sl+            +   ++ ++n+iD+PGHvdF +ev+++lr++Dga+++vda +G+++ T +vlr+a +++v++++++NK+Dr+  e + ++ e+  ++                                    +        e+ +v++gS++ g+ + 
   MMETSP1325-20131115|567_1 344 HEHEHEDKGTSLEGETSLDlklgagsesdgsDsLPAQLTVNCIDSPGHVDFNSEVTAALRITDGALVIVDALDGPCVMTFNVLRQAVQERVRPVLLLNKVDRLILEQQLTPPEMMARFkstiaeingciadeqeamraeaeehgmdS-------QlpdwrvslEDGTVAFGSGYFGWALA 516
                 455555555555555555566666665544414778899****************************************************************99999999999999988888888887877777666655444440.......1555555555667*******999443 PP

>> PF03764.13  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   2.9e-16   7.9e-13      33     119 ..     997    1094 ..     989    1095 .. 0.90

  Alignments for each domain:
  == domain 1    score: 47.9 bits;  conditional E-value: 2.9e-16
                  -EEEEEE--.----EEEE--------GGGHHHHH---TTTT-.......---.-------SEEEEEEE----T..TT--HHHHHH---HHHHHHHH-- CS
  PF03764.13   33 vilriePle.gggnefvdetkggqvpkefkeavekGfqealk.......eGp.lagepvtdvkvtLtdgslhe..vdsseaafkpaarralkeallkA 119 
                    ++++P+  gg+n++v++t+g+q ++   ++v+++f+  ++       +G  l+ge++++v++ ++d+++h+   ++++++++pa+ ral +a+l+A
   MMETSP1325-20131115|567_1  997 RLWAFGPEGgGGANVIVNTTQGVQGMDGLRQSVVAAFRRFCAatasprpSGCgLCGERMQGVRFDIVDAKVHNdsRHRGPSQIEPAVERALSAAFLEA 1094
                  579****99*****************************999744444444534899****************************************98 PP

>> PF00679.19  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.0   4.1e-15   1.1e-11       1      85 [.    1097    1180 ..    1097    1182 .. 0.95

  Alignments for each domain:
  == domain 1    score: 44.2 bits;  conditional E-value: 4.1e-15
  PF00679.19    1 vllEPimeveievpeeylgkvisdltkrrGeilsmenagenrvvieaevPlaeligysteLrslTsGrgsfslefsgYepvpgek 85  
                  vl+EP +ev++++p+  lg+ +  l++r +      +   + v++++ +P+a   g+ +eLr +T Gr+  +++fsg+ +++g+ 
   MMETSP1325-20131115|567_1 1097 VLYEPTYEVTVTAPAGDLGTLYDALCSRGASGVTHVQM-REDVTVTGVLPVALANGLTDELRGATGGRAFPTMQFSGFGQLEGDA 1180
                  589***************************88888888.89**************************************999875 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.5   5.4e-11   1.5e-07       4      74 .]     733     823 ..     732     823 .. 0.93

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 5.4e-11
                 EEEEEEE--EETTEEEEEET.TTCTEEE.....................EEEEEEEEEETTC.EESEEECEE--EEEESSSGGGGGTT---EEE CS
  PF03144.20   4 atgrvysGtlkkGdtvrilg.ndtskke.....................ivtrvrsletfng.dldeavaganaGvivaikgledaiikGdtlt 74 
                 a++rv sG++++G++v +l+  +    +                      ++++++++ f+g ++  +v +a aG+ v+++gl++++ik +tlt
   MMETSP1325-20131115|567_1 733 ALARVLSGVVRVGQEVSVLPpGYE---PphdpalptaegeagveeaatvKRAKIKRIVLFKGgKESTDVREAIAGDVVGLVGLDQVVIKTATLT 823
                 789***************998863...58899****************************99677778************************96 PP

>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00011      0.31       1      69 [.     184     247 ..     184     248 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00011
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklggrel 69 
                 l+ gnL++ +++ e   + + + +   i+ ++    +++gfa  e  +   ae+ l+ lng++++ r+l
   MMETSP1325-20131115|567_1 184 LYFGNLTFGTSKAEFVAMVGAVDEAATIERFN----SKRGFAVAEPSTAAKAEALLA-LNGTTFKERVL 247
                 6779*********9999999999999999888....8****************9999.********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.62u 0.43s 00:00:02.05 Elapsed: 00:00:01.30
# Mc/sec: 2237.83
//
Query:       MMETSP1325-20131115|581_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-08   34.9   0.0    7.4e-07   29.0   0.0    2.2  2  PF00498.21 FHA domain


Domain annotation for each model (and alignments):
>> PF00498.21  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.9   0.0    0.0037        51      17      45 ..       2      28 ..       1      49 [. 0.79
   2 !   29.0   0.0   5.4e-11   7.4e-07       3      68 .]      99     168 ..      97     168 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0037
                TS-TTCEEEEEEETCEEEEEEECST--EE CS
  PF00498.21 17 siSrkHalikydeggkfyleDlgSknGtf 45
                siSr+H +  + +g +++ + lg   Gt 
   MMETSP1325-20131115|581_1  2 SISRNHIQMAVSDG-ECQMTVLG-AAGTQ 28
                8*******999999.88888877.66664 PP

  == domain 2    score: 29.0 bits;  conditional E-value: 5.4e-11
                 E-E-TTSSS---TTTS-TTCEEEEEEET....CEEEEEEECST--EEETT..EECSTTSEEEE-TTEEEEEC CS
  PF00498.21   3 iGRssdcdivlddpsiSrkHalikydeg....gkfyleDlgSknGtfvNg..qrigkgepvrLksgdvielG 68 
                 iGR+++  i l+  siS +H ++++       g +++ D+ S+nGt +N+  + +++  ++ + +g +++lG
   MMETSP1325-20131115|581_1  99 IGRKAKHAITLPKNSISGNHLEFERIAKgdlkGWWTVCDV-SSNGTTLNNrwKMVKR-AKYLVIPGMTLSLG 168
                 9**********************88888899999*****8.9******985444444.67777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.75
# Mc/sec: 667.78
//
Query:       MMETSP1325-20131115|583_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.07   13.0   0.2      0.083   12.8   0.2    1.1  1  PF08245.7  Mur ligase middle domain
      0.093   11.5   0.0       0.12   11.2   0.0    1.1  1  PF00869.15 Flavivirus glycoprotein, central and dimerisation domains


Domain annotation for each model (and alignments):
>> PF08245.7  Mur ligase middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   1.2e-05     0.083       3      59 ..       6      74 ..       6      93 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.2e-05
  PF08245.7  3 GTnGKTTtteliaallkaa...gktvgtag......ntnneiglpallaelee...keadvavlElSsf 59
               GT   TTtt++i + ++++    ++++ +g      nt +++++ +l  +l++    + +++vlE  + 
  MMETSP1325-20131115|583_1  6 GTWAHTTTTYMIDQGFDRDstiSGRTSAGGspglddNTRSSTTIESLPYKLTKlnaVREQHLVLEFTQD 74
               78888***********99988766777777899999555555554444444443335699999998877 PP

>> PF00869.15  Flavivirus glycoprotein, central and dimerisation domains
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.7e-05      0.12     216     257 ..      51      92 ..      47     100 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.7e-05
  PF00869.15 216 nlPwtsgsetewrnkeslveFkephavkmevvalgdqegall 257
                 +lP++ ++ +++r+++ ++eF + + v + ++alg +   l 
   MMETSP1325-20131115|583_1  51 SLPYKLTKLNAVREQHLVLEFTQDTYVSQVITALGTLVERLC 92 
                 59*********************************9876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.66
# Mc/sec: 366.72
//
Query:       MMETSP1325-20131115|582_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-08   31.5   4.2     0.0035   17.1   0.0    3.2  3  PF13516.1  Leucine Rich repeat
     0.0021   17.5   0.0      0.077   12.5   0.0    2.0  2  PF12799.2  Leucine Rich repeats (2 copies)
      0.003   17.2   0.9       0.24   11.4   0.6    2.9  2  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.074   12.7   0.0       0.18   11.4   0.0    1.7  1  PF13855.1  Leucine rich repeat
        4.3    6.8   7.1        8.9    5.7   4.1    1.9  2  PF04528.8  Adenovirus early E4 34 kDa protein conserved region


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00092       2.5       3      23 ..      13      33 ..      11      34 .. 0.86
   2 !   17.1   0.0   1.3e-06    0.0035       1      23 [.      36      59 ..      36      60 .. 0.90
   3 !    6.3   0.6    0.0041        11       1      12 [.      62      73 ..      62      74 .] 0.91

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00092
  PF13516.1  3 nLtsLdLsnNqigdeGlsaLa 23
               +Lt+ ++++++i+d  + aLa
  MMETSP1325-20131115|582_1 13 KLTTTNIGFTNITDTAVIALA 33
               677889***********9998 PP

  == domain 2    score: 17.1 bits;  conditional E-value: 1.3e-06
  PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
               + +Lt++dLs+++ i+d  + aLa
  MMETSP1325-20131115|582_1 36 CAKLTTIDLSYCDnITDAAVIALA 59
               668*********77******9998 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.0041
  PF13516.1  1 lknLtsLdLsnN 12
               + nLt+++Ls +
  MMETSP1325-20131115|582_1 62 CANLTTICLSCC 73
               77********99 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   2.8e-05     0.077       3      42 ..      14      56 ..      12      60 .. 0.75
   2 !    8.4   0.0   0.00054       1.5       2      18 ..      38      55 ..      37      74 .] 0.51

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.8e-05
  PF12799.2  3 LevLdLsnNnIkd..lppela.nLpnLktLnLsnN.pisdlsaL 42
               L++ ++  +nI+d  + + la  + +L+t++Ls++ +i+d  ++
  MMETSP1325-20131115|582_1 14 LTTTNIGFTNITDtaVIA-LAtHCAKLTTIDLSYCdNITDAAVI 56
               666788889999844334.43489**********9789997654 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00054
  PF12799.2  2 nLevLdLsnN.nIkdlpp 18
               +L+++dLs++ nI+d   
  MMETSP1325-20131115|582_1 38 KLTTIDLSYCdNITDAAV 55
               456666666545665333 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.41   1.1e+03       2      13 ..      14      25 ..       9      33 .. 0.66
   2 !   11.4   0.6   8.7e-05      0.24       1      15 [.      38      58 ..      38      74 .] 0.76

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.41
                ESEEEETSSBCB CS
  PF00560.28  2 LeeLdLsgNnlt 13
                L++ ++ ++n+t
   MMETSP1325-20131115|582_1 14 LTTTNIGFTNIT 25
                555566666666 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 8.7e-05
                TESEEEETSS.BCBC.....H CS
  PF00560.28  1 nLeeLdLsgN.nlts.....l 15
                +L+++dLs++ n+t+     l
   MMETSP1325-20131115|582_1 38 KLTTIDLSYCdNITDaaviaL 58
                69***********98666552 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   6.6e-05      0.18      13      58 ..      24      72 ..      12      74 .] 0.61

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.6e-05
  PF13855.1 13 lkvipdgaFk.glsnLkvLdLs.gnnlksisp.eafkgLpsLreLnLsg 58
               +++ +  a+  ++ +L+++dLs ++n++      +  ++ +L+ + Ls 
  MMETSP1325-20131115|582_1 24 ITDTAVIALAtHCAKLTTIDLSyCDNITDAAViALATHCANLTTICLSC 72
               5555554444478888888888888887664413456777777666654 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1    0.0035       9.5      73     101 ..      22      50 ..       3      55 .. 0.81
   2 ?    5.7   4.1    0.0032       8.9      63      98 ..      38      73 ..      21      74 .] 0.78

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0035
  PF04528.8  73 kgllnnlvvlvCksCaelseisvrcCarr 101
                  +++  v+ + ++Ca+l+ i ++ C + 
  MMETSP1325-20131115|582_1  22 TNITDTAVIALATHCAKLTTIDLSYCDNI 50 
                45778899999**************9765 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0032
  PF04528.8 63 klsfgevvvlkgllnnlvvlvCksCaelseisvrcC 98
               kl   +  +++ +++  v+ + ++Ca+l+ i ++cC
  MMETSP1325-20131115|582_1 38 KLTTIDLSYCDNITDAAVIALATHCANLTTICLSCC 73
               445556678999999999999999999999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 311.11
//
Query:       MMETSP1325-20131115|584_1  [L=365]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-29  101.9   0.0    2.2e-24   85.6   0.0    2.3  2  PF00334.14 Nucleoside diphosphate kinase


Domain annotation for each model (and alignments):
>> PF00334.14  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   2.1e-06     0.029       4     104 ..     117     219 ..     115     225 .. 0.66
   2 !   85.6   0.0   1.6e-28   2.2e-24       3     129 ..     229     359 ..     227     361 .. 0.96

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.1e-06
                 EEEE-HHHHCTT-HHHHHHHHHH---EEEEEEEE---HHHHHHHTGGGTTSTTHHH.HHHHHT---EEEEEEE-.--CHHHHHHH----STTCS...--------- CS
  PF00334.14   4 lvliKPdavkrgligeiisrleekglkivalkmlqlteeqaeehYaehkgkpffee.lvefitsgpvvalvleg.enavekvrellGatnpaea...apgtiRgdf 104
                 ++l+KP a   ++ig+i+s +++  ++++++km+ l+   a ++  +  +    e+ ++e  ++g v a   ++ e+    v + +G ++++e+   a ++ R+ f
   MMETSP1325-20131115|584_1 117 FALVKPSAF--SSIGDIVSSIQHP-FSLARMKMVSLDASAADRFGCSAGNAVAIEAtVIEAASNGDVAARWAKAmESHGDGVYTACGGQDSHEDtkfAFDSCRSTF 219
                 89*******..69********876.*************99999866655555444413444444555444444434444555566666655555445555555555 PP

  == domain 2    score: 85.6 bits;  conditional E-value: 1.6e-28
                 EEEEE-HHHHCTT-HHHHHHHHHH---EEEEEEEE---HHHHHHHTGGGTT.STTHHHHHHHHT---EEEEEEE---CHHHHHHH----STTCS...------------GGG-SEEE--SHHHHHHHHHHH CS
  PF00334.14   3 tlvliKPdavkrgligeiisrleekglkivalkmlqlteeqaeehYaehkg.kpffeelvefitsgpvvalvlegenavekvrellGatnpaea...apgtiRgdfavslgeNlvHgSdseesaereiklf 129
                 t +l+KP+++ ++ +g+++s++ ++g++i+a++m++l++ +a ++++ ++g    + ++v+++ +  ++ + le++n+v+++re++G+ + + a   +p+++R+ f+ s  +N+vH++d +e+   e+++f
   MMETSP1325-20131115|584_1 229 TACLVKPHVLISKQAGDVLSEILASGFNITAMEMVHLDRSTATNFFSVYQGvLTEYADMVAHMIENYSIFIRLEAPNVVADFREFCGPNDTELAkvlRPKSLRALFGESRVRNAVHCTDLPEDGGLECEYF 359
                 899************************************************8789***********************************9999999*************************999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.42s 00:00:01.07 Elapsed: 00:00:00.67
# Mc/sec: 1305.48
//
Query:       MMETSP1325-20131115|578_1  [L=722]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-30  105.0   0.0    1.7e-29  102.7   0.0    2.1  1  PF00069.20 Protein kinase domain
     0.0013   17.7   0.0       0.41    9.6   0.0    2.7  3  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.7   0.0   2.4e-33   1.7e-29      23     259 ..     372     702 ..     368     703 .. 0.88

  Alignments for each domain:
  == domain 1    score: 102.7 bits;  conditional E-value: 2.4e-33
                 CCEEEEEEEEEGGGHHHHHHHHHHH......HHHHHHHHH...............-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E............................................................EE------EEE..........CEESS-CSS----GGGS-HHHHH.TSHHHHHHHHHHHHHHHHHHHHC---TTTST...HHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGG CS
  PF00069.20  23 tgkkvAvKilkkeeekskkektavr......Elkilkkls...............HpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel............................................................kiaDFGlakkl..........eksseklttlvgtreYmAPEvll.kakeytkkvDvWslGvilyelltgklpfsge...seedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpw 259
                 t+++vAvK+++ke+ ++ k+ ++        E++ ++ ++                + ++ +le+ e+++ +y ++ ++e  ++f++++++g++se e   +++qil gle lHs g++H D+  eN++ld +++                                                              i+D+G+  k+           ++s++   ++g   Y+APE+l+   + +  + D+W++Gv+++ lltg +p++ e   s +dq+  + ++ +       ++ ++ s+++ dl+++ l+ dp++R t++++ +h w
   MMETSP1325-20131115|578_1 372 TNRRVAVKCISKERVEQMKRARSGMnenplkEIAGMQYITdrmsgrvaapdlrgdPSRVLPILECLEDDNWIYTIMPCLED-EMFNVVEAHGRFSEAETFLYLEQILDGLEVLHSLGLAHHDMSLENLMLDGQSKRyrcwsqivsaisavlgpkllawptllvcqfillfvvsmlriqqpsahaclptipaaqgkcVIIDLGMVVKVplranglpikISPSRDWPGRCGKMLYLAPEILNpVVSFDPLALDMWAVGVMMFVLLTGVPPWDVEtgpSPADQRFALVQNGRLIDLLTAWNFTDLSASCVDLMQSFLRADPNTRFTIAQARNHVW 702
                 67889999999998888776554447888885555555433444555555555556779999999999***********88.9************************************************66666799********************************************************99********99*********999999****************995667888899********************777887777777777777777777777777889***************************98 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.19   1.3e+03      27     227 ..     372     389 ..     362     413 .. 0.62
   2 !    9.6   0.0     6e-05      0.41      87     139 ..     453     503 ..     424     509 .. 0.78
   3 !    5.0   0.0    0.0015        10     169     255 ..     601     697 ..     562     701 .. 0.64

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.19
                 SEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS--- CS
  PF07714.12  27 kevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekp 227
                 ++ +VavK+++++  e+                                                                                                                                                                                        
   MMETSP1325-20131115|578_1 372 TNRRVAVKCISKERVEQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M 389
                 45677777774433322.......................................................................................................................................................................................2 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 6e-05
                 -HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETT CS
  PF07714.12  87 dLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleee 139
                 ++ ++++++   +++ ++++ +  qi +G+e L+s  l H d++  N +l+ +
   MMETSP1325-20131115|578_1 453 EMFNVVEAH--GRFSEAETFLYLEQILDGLEVLHSLGLAHHDMSLENLMLDGQ 503
                 555666666..889999999*****************************9854 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.0015
                 GGGS-HHHHHHSE.EE.HHHHHHH---HHHHHHTTT-GTTTTS...HHHH.HHHHHHTT-BS-.....--TTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  PF07714.12 169 vkWmapEslkekk.ft.sksDvWsfGvllwEiftlgespypgl...snee.vlellkegkrle.....kpekcpeelyelmkqCweeepeeRptfkel 255
                 + ++apE+l+  + f   + D+W+ Gv+++ ++t g  p+      s+++  ++l+++g+ ++     + ++ +++  +lm++ ++++p+ R t+++ 
   MMETSP1325-20131115|578_1 601 MLYLAPEILNPVVsFDpLALDMWAVGVMMFVLLT-GVPPWDVEtgpSPADqRFALVQNGRLIDlltawNFTDLSASCVDLMQSFLRADPNTRFTIAQA 697
                 56889999988765442567***********999.667743221123333033333444432211111234456677888888888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (722 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.09u 0.35s 00:00:01.44 Elapsed: 00:00:00.73
# Mc/sec: 2370.10
//
Query:       MMETSP1325-20131115|585_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-19   68.0   0.8    5.2e-19   68.0   0.6    1.7  2  PF03948.9  Ribosomal protein L9, C-terminal domain
      8e-13   47.3   0.1    1.6e-12   46.3   0.0    1.5  1  PF01281.14 Ribosomal protein L9, N-terminal domain
  ------ inclusion threshold ------
       0.12   12.3   0.3       0.21   11.5   0.2    1.3  1  PF02926.12 THUMP domain


Domain annotation for each model (and alignments):
>> PF03948.9  Ribosomal protein L9, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.96   4.4e+03       7      24 ..      90     107 ..      87     109 .. 0.75
   2 !   68.0   0.6   1.1e-22   5.2e-19       2      87 .]     113     198 ..     112     198 .. 0.97

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.96
                THHHHTSS-EEECS---- CS
  PF03948.9   7 laekLegltvtikakage 24 
                +ae+Le+  v+ +++a e
  MMETSP1325-20131115|585_1  90 TAEALEQAAVVAAKRAEE 107
                688888888888887776 PP

  == domain 2    score: 68.0 bits;  conditional E-value: 1.1e-22
                TSTTTTHHHHTSS-.EEECS----.-S----BSHHHHHHHHTTT------SSTTS-SS-B-B---EEEEBSSSSTEEEEEEEEE--- CS
  PF03948.9   2 eeaeelaekLeglt.vtikakageegkLFGsVtakdiaealkkqlgieidkkkielpepikelGeyevevkLhkeVtakikveVvae 87 
                ++aee ++kLe+++ +t+++k+g++++LFGsV+ +d+  a+++++g+++   k+++++ ik  G+y+ ++kLh+++ta ++++V++e
  MMETSP1325-20131115|585_1 113 AAAEENKAKLEAIKtFTVTKKVGADEQLFGSVSVTDVLGAVEEASGLTLGSPKVKIED-IKMAGTYDFTIKLHQGITAVLSLTVEPE 198
                689*********999*******************************************.*************************875 PP

>> PF01281.14  Ribosomal protein L9, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   3.6e-16   1.6e-12       2      47 ..      52      97 ..      51      98 .. 0.96

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 3.6e-16
                EEEESS-BTTB-----EEE-----IIIIITT---EEE-SHHHHHHH CS
  PF01281.14  2 kVILledveglGkkGdiveVkpGYarNfLlpkglAvyateenlkel 47
                kV+L++d eg+G+  ++v+Vk+G+  N+ lp+g+   at+e+l++ 
   MMETSP1325-20131115|585_1 52 KVLLTKDLEGVGRSEEVVTVKNGFYLNYILPRGFGSLATAEALEQA 97
                8*****************************************9985 PP

>> PF02926.12  THUMP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   4.6e-05      0.21       9      69 ..     103     166 ..      95     171 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 4.6e-05
                 E-S-HHHHHHHHHHHHHHHHHH-S-EEEEEEEESSS-SSS-HHHHHHH---CCCCCSS.....-EE CS
  PF02926.12   9 vkadleeilkaakeivkekffeegetFaVrvrrrgkeheftsreinrevGkaivkrlg.....lkV 69 
                  +a+++ +++aa e +k k+++  +tF V+ ++   e  f+s+ + +++G+ + ++ g     +kV
   MMETSP1325-20131115|585_1 103 KRAEEDAVIAAAAEENKAKLEA-IKTFTVTKKVGADEQLFGSVSVTDVLGA-VEEASGltlgsPKV 166
                 4678999***********9998.*********9999**************8.66665533334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       508  (0.0371562); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.34s 00:00:00.89 Elapsed: 00:00:00.60
# Mc/sec: 978.51
//
Query:       MMETSP1325-20131115|587_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00075   19.1   0.1    0.00092   18.8   0.1    1.2  1  PF01979.15 Amidohydrolase family
      0.001   18.2   0.3     0.0014   17.8   0.2    1.3  1  PF07969.6  Amidohydrolase family


Domain annotation for each model (and alignments):
>> PF01979.15  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   1.3e-07   0.00092     284     333 .]     106     164 ..      42     164 .. 0.62

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 1.3e-07
                 H.......GHHHHHHH...HHHHHHHHHTTHHHHHH---TTT-.----------EEEE- CS
  PF01979.15 284 a.......eelkvalllg.lslkealrmaTinpAkalglddei.GsievGkdADlvvvd 333
                 a       ++++ +  +  +s++eal++aT  pA+ l  d  + G++ +G +AD+v++d
   MMETSP1325-20131115|587_1 106 AgavvtmdQCVRNFRGFTqCSIAEALEAATARPARLLYGDGTVhGTLRPGARADMVLLD 164
                 1333333333344443336*****************99987666*************98 PP

>> PF07969.6  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2     2e-07    0.0014     366     403 ..     123     161 ..      69     162 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 2e-07
  PF07969.6 366 erlsleealalyTrgpAka.lgledrkGtlevGkdADlv 403
                   s+ eal + T++pA++ +g     Gtl++G++AD v
  MMETSP1325-20131115|587_1 123 TQCSIAEALEAATARPARLlYGDGTVHGTLRPGARADMV 161
                56799**************66666677**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:01.17
# Mc/sec: 450.60
//
Query:       MMETSP1325-20131115|576_1  [L=430]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       722  (0.0528087); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.85u 0.47s 00:00:01.31 Elapsed: 00:00:00.96
# Mc/sec: 1073.37
//
Query:       MMETSP1325-20131115|590_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.59
# Mc/sec: 564.57
//
Query:       MMETSP1325-20131115|592_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-06   26.4   0.1      8e-06   25.8   0.1    1.4  1  PF13857.1  Ankyrin repeats (many copies)
      6e-06   25.6   0.1    1.4e-05   24.5   0.0    1.6  2  PF00023.25 Ankyrin repeat
    4.6e-05   23.5   0.0      8e-05   22.7   0.0    1.4  1  PF12796.2  Ankyrin repeats (3 copies)
    5.1e-05   23.0   0.1    0.00011   21.9   0.0    1.7  2  PF13606.1  Ankyrin repeat
    0.00013   22.2   0.0    0.00032   21.0   0.0    1.6  2  PF13637.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
       0.13   12.0   0.1          1    9.1   0.0    1.9  2  PF09722.5  Protein of unknown function (DUF2384)


Domain annotation for each model (and alignments):
>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.1   3.5e-09     8e-06      12      56 .]      10      57 ..       5      57 .. 0.83

  Alignments for each domain:
  == domain 1    score: 25.8 bits;  conditional E-value: 3.5e-09
  PF13857.1 12 tdeggntpLhlAakggalevvrlLl..apgadlnlrdsdg.ltaldlA 56
               +d++g+t+Lh+Aa++g+++v++lL   +++++++++   g   ++dlA
  MMETSP1325-20131115|592_1 10 RDLQGRTALHVAAEKGHQDVCELLEaaMQQCSAHAHLPVGeFAPVDLA 57
               689999*****************9888888888777666666666666 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   5.9e-09   1.4e-05       2      21 ..      14      33 ..      13      37 .. 0.96
   2 ?   -2.8   0.0       2.7   6.1e+03       2       6 ..      58      62 ..      58      66 .. 0.73

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 5.9e-09
                SCBHHHHHHHTTHHHHHHHH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklL 21
                G+T+LH+Aa++g+ +v++lL
   MMETSP1325-20131115|592_1 14 GRTALHVAAEKGHQDVCELL 33
                9*****************99 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 2.7
                SCBHH CS
  PF00023.25  2 GfTPL 6 
                G+TP 
   MMETSP1325-20131115|592_1 58 GRTPV 62
                89995 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   3.5e-08     8e-05      54      78 ..       9      33 ..       4      45 .. 0.83

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 3.5e-08
  PF12796.2 54 akdkegntpLhlAvrnghlelvklL 78
               ++d +g+t+Lh+A+++gh+++++lL
  MMETSP1325-20131115|592_1  9 SRDLQGRTALHVAAEKGHQDVCELL 33
               677899***************9998 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   4.9e-08   0.00011       2      21 ..      14      33 ..      13      44 .. 0.94
   2 ?   -2.4   0.0       3.5   7.9e+03       2       6 ..      58      62 ..      57      66 .. 0.72

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 4.9e-08
  PF13606.1  2 GnTpLhlAasngrielveaL 21
               G+T+Lh+Aa++g+ +++e+L
  MMETSP1325-20131115|592_1 14 GRTALHVAAEKGHQDVCELL 33
               9***************9986 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 3.5
  PF13606.1  2 GnTpL 6 
               G+Tp 
  MMETSP1325-20131115|592_1 58 GRTPV 62
               88985 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.4e-07   0.00032      24      53 ..       4      33 ..       2      34 .. 0.92
   2 ?   -2.9   0.0       4.4   9.9e+03      32      38 ..      56      62 ..      52      64 .. 0.65

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 1.4e-07
  PF13637.1 24 gidinrtdesGntaLhiAalrgnieilklL 53
               g+++  +d +G+taLh+Aa++g+ ++++lL
  MMETSP1325-20131115|592_1  4 GVSPWSRDLQGRTALHVAAEKGHQDVCELL 33
               7889999****************9999988 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 4.4
  PF13637.1 32 esGntaL 38
                 G+t++
  MMETSP1325-20131115|592_1 56 LAGRTPV 62
               4577764 PP

>> PF09722.5  Protein of unknown function (DUF2384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00045         1      24      50 ..      11      36 ..       9      39 .. 0.91
   2 ?    0.9   0.0      0.16   3.7e+02      25      33 ..      56      64 ..      52      66 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00045
  PF09722.5 24 aLgGrtPldlldteaGaelVedlLdrl 50
                L Grt+l ++  e G + V++lL++ 
  MMETSP1325-20131115|592_1 11 DLQGRTALHVAA-EKGHQDVCELLEAA 36
               699*********.***********986 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.16
  PF09722.5 25 LgGrtPldl 33
               L GrtP+ l
  MMETSP1325-20131115|592_1 56 LAGRTPVAL 64
               8999*9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.30u 0.45s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 258.96
//
Query:       MMETSP1325-20131115|591_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.59
# Mc/sec: 491.46
//
Query:       MMETSP1325-20131115|594_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.4   4.3      0.056   13.6   1.0    1.7  2  PF10152.4 Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.0   4.1e-06     0.056      73     126 ..       8      61 ..       3      77 .. 0.69
   2 ?   -0.5   0.1     0.092   1.3e+03     107     107 ..     131     131 ..      61     173 .. 0.51

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 4.1e-06
  PF10152.4  73 ppppgaraeaaaqeaeaaraetpaeqepealaegrltvrkdpryakYfkmlklg 126
                +ppp+a a+a+a+++ +++ + p ++  + ++++r +++++p y+ + +m+++ 
  MMETSP1325-20131115|594_1   8 GPPPAALASATAPTTAKDASSSPVPELVPVSEAERSKIAQEPGYKIFSQMMQVL 61 
                45555455555555555555555555555678899****************975 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.092
  PF10152.4 107 r 107
                +
  MMETSP1325-20131115|594_1 131 P 131
                1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       438  (0.0320363); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.63
# Mc/sec: 673.26
//
Query:       MMETSP1325-20131115|595_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.57
# Mc/sec: 285.08
//
Query:       MMETSP1325-20131115|597_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-18   66.1   1.3    1.5e-18   66.1   0.9    1.9  2  PF00831.18 Ribosomal L29 protein
    0.00071   19.6   1.3    0.00086   19.4   0.9    1.2  1  PF00380.14 Ribosomal protein S9/S16
  ------ inclusion threshold ------
      0.088   12.3   0.3       0.22   11.0   0.1    1.7  2  PF09048.5  Cro


Domain annotation for each model (and alignments):
>> PF00831.18  Ribosomal L29 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.9   3.2e-22   1.5e-18       1      57 [.       6      63 ..       6      64 .. 0.95
   2 ?   -1.7   0.4      0.48   2.2e+03       7       7 ..      95      95 ..      82     112 .. 0.57

  Alignments for each domain:
  == domain 1    score: 66.1 bits;  conditional E-value: 3.2e-22
                CCCCTTSHHHHHHHHHHCHHHHHHHHHHHHH---G.GGCCHHHHHHHHHHHHHHHHHH CS
  PF00831.18  1 akelrelsdeeLkeklkelkkeLfnLRfqkatgql.enphkikevRkdIARilTvlne 57
                a elr+ +++ + +kl+elk+eL +LR++k+tg++ ++++kik vRk+IAR+lTv n+
   MMETSP1325-20131115|597_1  6 AYELRSSKKDAMLKKLEELKNELGQLRVAKVTGGAqSKLAKIKVVRKSIARVLTVYNQ 63
                579*****************************8777********************98 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.48
                S CS
  PF00831.18  7 l 7 
                l
   MMETSP1325-20131115|597_1 95 L 95
                3 PP

>> PF00380.14  Ribosomal protein S9/S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.9   1.9e-07   0.00086      55     107 ..      33      91 ..       3     108 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 1.9e-07
                 EEEEE-----..--HHHHH---TTHHHHSSTTTTTTTST-....---S-B--S--S--- CS
  PF00380.14  55 rvkvkGGGls..gqaeAirlaiaraLvaldeksrkeLkkk....glltrDsRrkerkky 107
                  +kv+GG  s  ++++ +r +iar L+ ++++ +++L++     ++l +D R+k+ + +
   MMETSP1325-20131115|597_1  33 VAKVTGGAQSklAKIKVVRKSIARVLTVYNQTQKQKLREVyadrKYLPTDLRVKKTRAI 91 
                 4688888765337899****************99999998888899****999987765 PP

>> PF09048.5  Cro
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   4.7e-05      0.22       6      39 ..      21      54 ..      18      64 .. 0.84
   2 ?   -2.8   0.0      0.98   4.4e+03      31      39 ..     106     114 ..     105     119 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 4.7e-05
               HHHHHHH--HHHHHHH----HHHHHHHHH----E CS
  PF09048.5  6 LsdyveefGQakaAkdlGvkqsaIskalragRkI 39
               L++  +e GQ ++Ak  G +qs ++k   ++++I
  MMETSP1325-20131115|597_1 21 LEELKNELGQLRVAKVTGGAQSKLAKIKVVRKSI 54
               56667899******************87777777 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.98
                HHHH----E CS
  PF09048.5  31 kalragRkI 39 
                k l+a R+ 
  MMETSP1325-20131115|597_1 106 KTLKAERNF 114
                788999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1041  (0.076141); expected 273.4 (0.02)
Passed bias filter:                      610  (0.0446167); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.55
# Mc/sec: 535.91
//
Query:       MMETSP1325-20131115|600_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.62
# Mc/sec: 228.04
//
Query:       MMETSP1325-20131115|593_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   14.4   0.5      0.068   13.4   0.3    1.6  1  PF10554.4 Ash protein family


Domain annotation for each model (and alignments):
>> PF10554.4  Ash protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3     5e-06     0.068      29      75 ..       5      75 ..       2      92 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 5e-06
  PF10554.4 29 vfflrcralisyltavtgleiMVaraGqpkgapvsl........................ltGvsnpVrat 75
               ++fl++ a +s +t vt+ ++MVara +p  a  +                         l+Gv  pV+++
  MMETSP1325-20131115|593_1  5 FAFLSMLAVASAFTPVTRSRAMVARAQAPAKALPVAriarestamsmvvddveetsrpllLAGVFIPVSLA 75
               678889999999*****************776555458888888888888888888888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.78
# Mc/sec: 592.94
//
Query:       MMETSP1325-20131115|603_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-09   36.5   0.6    6.2e-09   35.4   0.4    1.6  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.4   4.6e-13   6.2e-09       1      26 [.     175     200 ..     175     203 .. 0.87

  Alignments for each domain:
  == domain 1    score: 35.4 bits;  conditional E-value: 4.6e-13
                 ---SEEE.E.E-.---EEEEETTT--E CS
  PF00397.21   1 lppgWeersddd.dGrvYYyNheTget 26 
                 lppgWeer d + ++r+YY++h+T++t
   MMETSP1325-20131115|603_1 175 LPPGWEERRD-PkTQRTYYVDHNTRKT 200
                 8*****7775.446***********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.64
# Mc/sec: 868.68
//
Query:       MMETSP1325-20131115|601_1  [L=436]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-18   65.9   0.0    5.4e-18   65.0   0.0    1.5  1  PF09229.6  Activator of Hsp90 ATPase, N-terminal
    2.4e-14   52.5   1.6    1.5e-09   37.2   0.2    2.4  2  PF13414.1  TPR repeat
    3.5e-14   51.5   0.2    6.3e-05   22.2   0.0    3.5  3  PF00515.23 Tetratricopeptide repeat
    6.7e-13   47.3   3.1     0.0021   17.7   0.0    3.8  4  PF07719.12 Tetratricopeptide repeat
    5.3e-09   36.3   2.6    1.2e-05   25.7   0.4    3.2  2  PF13432.1  Tetratricopeptide repeat
    4.8e-06   25.8   0.5       0.55   10.0   0.0    3.5  3  PF13181.1  Tetratricopeptide repeat
    1.9e-05   24.0   0.0      0.029   14.0   0.0    3.3  3  PF13176.1  Tetratricopeptide repeat
    7.5e-05   22.9   4.4        2.2    9.0   0.0    4.5  3  PF13428.1  Tetratricopeptide repeat
    0.00013   21.6   0.7       0.15   11.9   0.6    2.6  2  PF13424.1  Tetratricopeptide repeat
     0.0011   18.9   0.1     0.0021   18.0   0.1    1.5  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
  ------ inclusion threshold ------
      0.032   13.9   0.1        2.5    7.9   0.0    2.8  3  PF13371.1  Tetratricopeptide repeat
      0.067   13.5   1.1         56    4.3   0.0    4.0  3  PF13174.1  Tetratricopeptide repeat
      0.097   12.8   2.6        8.9    6.6   0.1    3.9  4  PF13431.1  Tetratricopeptide repeat
        5.2    5.5   6.5       0.53    8.8   0.1    2.2  3  PF12569.3  NMDA receptor-regulated protein 1


Domain annotation for each model (and alignments):
>> PF09229.6  Activator of Hsp90 ATPase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.0   5.5e-21   5.4e-18       2     135 ..     300     436 .]     299     436 .] 0.87

  Alignments for each domain:
  == domain 1    score: 65.0 bits;  conditional E-value: 5.5e-21
                EE-HHHHHHHHHHHHHT-EE.E-SSE.EEEEEEEE.EE-EEEEEE----EEEEEEEEEEEEEEEEETT---EE----EEEEEEECCCCTT----EE--SS-SHHHHH..HHHTTTT-...--HHHHHHHTTHHHHHHHHH CS
  PF09229.6   2 Kdatkwakeklkellknlkvkedees.kikitevskveGdasvsqrKGKkiflfelklklewegekkeeeekkvkGtveipelsseneeedyeieikvtdkkkeske..lkallkkk...lvpkireklkkfvkeLkeeh 135
                K+ t+wa++kl+e l +l+v+  e+  ++k+  +++++Gda+v++ ++Kk  lf+++++lew+ge k+  +  +kGt++ p+++ +  + +y++ ++v++ ++ +++  l+a+++++   l p i + + +f++++k+e+
  MMETSP1325-20131115|601_1 300 KNKTEWASAKLEEVLVGLEVSLPEGMgTVKVHALKDLTGDAEVTTMRNKKKYLFDFEFTLEWRGELKDIGS--CKGTLKYPDVTPD-CDGEYDVLYEVDKHTPPQARgvLDAFVRSSaqgLQPAITSRIGSFIEAYKAEF 436
                999****************755444339*************************************888888..*************.7777777777777777666677999999873335799**********999875 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.2   1.5e-12   1.5e-09       4      68 ..      33     101 ..      30     102 .. 0.87
   2 !   14.1   0.0   2.5e-05     0.024       6      36 ..     108     138 ..     104     145 .. 0.93

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 1.5e-12
  PF13414.1   4 ealkelGnalfkegdydeAieayekAleldpn...n..aelyynlAlaylklgkdyeeAledyekAleld 68 
                e+lk ++ +   ++++ eA+++y+kA+e +p    +  a l+ n++ a + +g ++ +Aled+++A++ d
  MMETSP1325-20131115|601_1  33 EELKSRAKVSVGQKNWPEAEALYTKAIEVNPApgtSaaAALHGNRSMARFSMG-NFAQALEDANEAVAAD 101
                7899999***********************8743323255*************.7***********9876 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 2.5e-05
  PF13414.1   6 lkelGnalfkegdydeAieayekAleldpnn 36 
                ++++G+a+ k++++ eA++ay+ +++l+p+n
  MMETSP1325-20131115|601_1 108 FYRKGQACSKLNRFSEAVAAYTSGVALEPEN 138
                6899*************************98 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   9.2e-06     0.009       6      32 ..      37      63 ..      32      65 .. 0.83
   2 !   10.2   0.1   0.00041       0.4       9      30 ..      79     100 ..      71     104 .. 0.80
   3 !   22.2   0.0   6.5e-08   6.3e-05       2      34 .]     106     138 ..     105     138 .. 0.95

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 9.2e-06
                HHHHHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23  6 nlGnaylklgkydeAleyyekALelnP 32
                 ++ +   ++++ eA++ y kA+e+nP
   MMETSP1325-20131115|601_1 37 SRAKVSVGQKNWPEAEALYTKAIEVNP 63
                566666679*****************9 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00041
                 HHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   9 naylklgkydeAleyyekALel 30 
                 +a +++g++ +Ale+ ++A+  
   MMETSP1325-20131115|601_1  79 MARFSMGNFAQALEDANEAVAA 100
                 6889**************9875 PP

  == domain 3    score: 22.2 bits;  conditional E-value: 6.5e-08
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALelnPnn 34 
                 k +y++G+a+ kl+++ eA+++y   + l+P+n
   MMETSP1325-20131115|601_1 106 KGFYRKGQACSKLNRFSEAVAAYTSGVALEPEN 138
                 689****************************97 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.7e-05     0.017       4      32 ..      35      63 ..      32      65 .. 0.87
   2 !   13.2   0.2   5.7e-05     0.056       1      31 [.      71     101 ..      71     104 .. 0.91
   3 !   17.7   0.0   2.1e-06    0.0021       3      34 .]     107     138 ..     105     138 .. 0.94
   4 ?   -3.0   0.1       8.9   8.7e+03      22      33 ..     139     150 ..     139     151 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.7e-05
                HHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12  4 lynlGlayyklgdyeeAleafekAleldP 32
                l  ++++   ++++ eA++++ kA+e +P
   MMETSP1325-20131115|601_1 35 LKSRAKVSVGQKNWPEAEALYTKAIEVNP 63
                5667888889******************9 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 5.7e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a ++ n+ +a + +g++++Ale+ ++A++ d
   MMETSP1325-20131115|601_1  71 AALHGNRSMARFSMGNFAQALEDANEAVAAD 101
                 56899**********************9866 PP

  == domain 3    score: 17.7 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 + y+ G+a+ kl+++ eA++a+   ++l+P+n
   MMETSP1325-20131115|601_1 107 GFYRKGQACSKLNRFSEAVAAYTSGVALEPEN 138
                 78****************************97 PP

  == domain 4    score: -3.0 bits;  conditional E-value: 8.9
                 HHHHHHHHH-TT CS
  PF07719.12  22 eafekAleldPn 33 
                 ++f+k l+ + +
   MMETSP1325-20131115|601_1 139 KLFKKLLKKAEE 150
                 579999998765 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0     0.002         2       3      33 ..      38      70 ..      36      76 .. 0.77
   2 !   25.7   0.4   1.2e-08   1.2e-05       5      63 ..      79     137 ..      76     139 .. 0.93

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.002
  PF13432.1  3 lArallraGdydeAlaaleaalala..Peaaea 33
               +A+  + ++++ eA+a++ +a++ +  P+   a
  MMETSP1325-20131115|601_1 38 RAKVSVGQKNWPEAEALYTKAIEVNpaPGTSAA 70
               7888899******************55554333 PP

  == domain 2    score: 25.7 bits;  conditional E-value: 1.2e-08
  PF13432.1   5 rallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPd 63 
                +a++  G++++Al+  ++a+a++  +   +++ ++a+ +l+r+ eA+a++ + +al P 
  MMETSP1325-20131115|601_1  79 MARFSMGNFAQALEDANEAVAADASYSKGFYRKGQACSKLNRFSEAVAAYTSGVALEPE 137
                688999*******************************************9998888876 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.056        54      14      32 ..      45      63 ..      34      65 .. 0.87
   2 !    8.3   0.1    0.0019       1.9       2      31 ..      72     101 ..      70     104 .. 0.88
   3 !   10.0   0.0   0.00056      0.55       4      33 ..     108     138 ..     105     139 .. 0.87

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.056
               TT-HHHHHHHHH---HHHH CS
  PF13181.1 14 lGdydkAkeylekalelkp 32
                +++ +A++ + ka+e +p
  MMETSP1325-20131115|601_1 45 QKNWPEAEALYTKAIEVNP 63
               68999***********998 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0019
                --TTT---HHHHTT-HHHHHHHHH---HHH CS
  PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelk 31 
                +++ n++++ +++G++ +A+e  ++a+  +
  MMETSP1325-20131115|601_1  72 ALHGNRSMARFSMGNFAQALEDANEAVAAD 101
                56779*********************9765 PP

  == domain 3    score: 10.0 bits;  conditional E-value: 0.00056
                TTT---HHHHTT-HHHHHHHHH---HHHH.. CS
  PF13181.1   4 yynlGdiYrqlGdydkAkeylekalelkp.r 33 
                 y++G++  +l+++++A +++   + l p +
  MMETSP1325-20131115|601_1 108 FYRKGQACSKLNRFSEAVAAYTSGVALEPeN 138
                79*******************9888888755 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.014        13      12      31 ..      45      62 ..      38      67 .. 0.77
   2 ?   -1.2   0.0       2.2   2.1e+03       9      20 ..      81      92 ..      76      97 .. 0.86
   3 !   14.0   0.0     3e-05     0.029       6      35 ..     112     139 ..     108     140 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.014
  PF13176.1 12 lgdyekAielyeraLaltkd 31
               + ++ +A+ ly++  a++  
  MMETSP1325-20131115|601_1 45 QKNWPEAEALYTK--AIEVN 62
               669**********..55544 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 2.2
  PF13176.1  9 ysrlgdyekAie 20
                +++g++ +A+e
  MMETSP1325-20131115|601_1 81 RFSMGNFAQALE 92
               678999999986 PP

  == domain 3    score: 14.0 bits;  conditional E-value: 3e-05
  PF13176.1   6 arlysrlgdyekAielyeraLaltkdplda 35 
                ++++s+l+++++A+ +y+   +++ +p+++
  MMETSP1325-20131115|601_1 112 GQACSKLNRFSEAVAAYTS--GVALEPENK 139
                99*****************..999999876 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0057       5.6       5      34 ..      36      65 ..      32      75 .. 0.76
   2 ?    5.4   0.7     0.032        31       5      38 ..      75     108 ..      69     114 .. 0.76
   3 !    9.0   0.0    0.0022       2.2       5      40 ..     109     144 ..     105     148 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0057
  PF13428.1  5 lalarallalGdpdeAiallrralalaPdd 34
                 +a +   + ++ eA+al+ +a++ +P  
  MMETSP1325-20131115|601_1 36 KSRAKVSVGQKNWPEAEALYTKAIEVNPAP 65
               567777788999**************9953 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.032
  PF13428.1   5 lalarallalGdpdeAiallrralalaPddaeal 38 
                  +  a + +G++++A++ +++a+a++ +     
  MMETSP1325-20131115|601_1  75 GNRSMARFSMGNFAQALEDANEAVAADASYSKGF 108
                556677889***************9987766555 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.0022
  PF13428.1   5 lalarallalGdpdeAiallrralalaPddaealll 40 
                ++ ++a+  l+++ eA+a++   +al P++  + +l
  MMETSP1325-20131115|601_1 109 YRKGQACSKLNRFSEAVAAYTSGVALEPENKLFKKL 144
                677999***********************9877665 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0078       7.7      53      75 ..      39      61 ..      35      64 .. 0.66
   2 !   11.9   0.6   0.00015      0.15       5      74 ..      71     133 ..      64     137 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0078
  PF13424.1 53 anlylalgdydeAleylekAlei 75
               a + + +++  eA++++ kA+e+
  MMETSP1325-20131115|601_1 39 AKVSVGQKNWPEAEALYTKAIEV 61
               55566667777777777777765 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00015
  PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                a+++ n   + + +g++ +Ale  ++a++        ++ + +  +  ++++ +l++++eA++ +   ++
  MMETSP1325-20131115|601_1  71 AALHGNRSMARFSMGNFAQALEDANEAVAA-------DASYSKGFYRKGQACSKLNRFSEAVAAYTSGVA 133
                677779999989****************87.......35567889******************9986665 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   2.1e-06    0.0021       2      81 ..      45     128 ..      44     131 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2.1e-06
                TT-HHHHHHHHHHHCCC-ST..-HHHHCHHH.HHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCH CS
  PF12895.2   2 qhnyknAlflaekllaespk..dpedaylya.lAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavL 81 
                q+n+ +A+ l+ k+++ +p   ++ +a+l+     + +++g++ +A+e  ++    d+s  +  y +++++ kl++++eA a++
  MMETSP1325-20131115|601_1  45 QKNWPEAEALYTKAIEVNPApgTSAAAALHGnRSMARFSMGNFAQALEDANEaVAADASYSKGFYRKGQACSKLNRFSEAVAAY 128
                78999**************75432555555469999**************98977777777999999**************998 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.4   1.4e+03      30      68 ..      33      71 ..      31      74 .. 0.80
   2 ?    7.9   0.0    0.0026       2.5      11      57 ..      48      99 ..      41     104 .. 0.74
   3 ?    2.8   0.0     0.099        96      36      63 ..     112     139 ..     109     151 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 1.4
  PF13371.1 30 yerRDrGlllaqlgclaaAaedLeaflelcpdapdaeli 68
               +e+  r+ + + + ++ +A + ++ ++e+ p + + +++
  MMETSP1325-20131115|601_1 33 EELKSRAKVSVGQKNWPEAEALYTKAIEVNPAPGTSAAA 71
               577778889999999999999999999999977666554 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0026
  PF13371.1 11 ferALavverllllaPd.....dpyerRDrGlllaqlgclaaAaedLeafle 57
               +++A a +   ++++P      ++ ++  r ++++ +g++a+A+ed + +++
  MMETSP1325-20131115|601_1 48 WPEAEALYTKAIEVNPApgtsaAAALHGNRSMARFSMGNFAQALEDANEAVA 99
               5555555555555555555555788888999***************988876 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.099
  PF13371.1  36 GlllaqlgclaaAaedLeaflelcpdap 63 
                G +  +l+++++A+++++  ++l+p+  
  MMETSP1325-20131115|601_1 112 GQACSKLNRFSEAVAAYTSGVALEPENK 139
                788899***********99999999765 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.18   1.7e+02      13      31 ..      45      63 ..      37      64 .. 0.83
   2 ?    2.0   0.1      0.32   3.1e+02       8      27 ..      79      98 ..      76     101 .. 0.79
   3 ?    4.3   0.0     0.058        56       3      24 ..     108     129 ..     106     130 .. 0.90

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.18
               HHHHHHHHHHHHHHHHH-T CS
  PF13174.1 13 lgdtdeAlealerlikeyP 31
               ++++ eA +++ + i+  P
  MMETSP1325-20131115|601_1 45 QKNWPEAEALYTKAIEVNP 63
               679***********99777 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.32
               HHHHHHHHHHHHHHHHHHHH CS
  PF13174.1  8 lsyyklgdtdeAlealerli 27
               ++++ +g++++Ale  ++ +
  MMETSP1325-20131115|601_1 79 MARFSMGNFAQALEDANEAV 98
               8899999****999776665 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.058
                HHHHHHHHHHHHHHHHHHHHHH CS
  PF13174.1   3 lyklalsyyklgdtdeAleale 24 
                +y+ +++  kl++++eA++a+ 
  MMETSP1325-20131115|601_1 108 FYRKGQACSKLNRFSEAVAAYT 129
                79********99********96 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.22   2.1e+02       1      10 [.      54      63 ..      54      64 .. 0.94
   2 ?    6.6   0.1    0.0091       8.9       5      33 ..      70      98 ..      68      99 .. 0.89
   3 ?    1.1   0.0      0.54   5.3e+02       4      33 ..      96     125 ..      94     126 .. 0.88
   4 ?    0.0   0.0       1.2   1.2e+03       1      17 [.     140     156 ..     140     157 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.22
  PF13431.1  1 lyekaleldP 10
               ly ka+e +P
  MMETSP1325-20131115|601_1 54 LYTKAIEVNP 63
               7********9 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0091
  PF13431.1  5 aleldPnnadaynnLAelllnnGdleeAe 33
               a +l+ n ++a++ ++++ +++ d  eA 
  MMETSP1325-20131115|601_1 70 AAALHGNRSMARFSMGNFAQALEDANEAV 98
               778999****************9999986 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.54
  PF13431.1   4 kaleldPnnadaynnLAelllnnGdleeAe 33 
                +a++ d  ++  +++++++ ++++++ eA 
  MMETSP1325-20131115|601_1  96 EAVAADASYSKGFYRKGQACSKLNRFSEAV 125
                7899999999999*********99999886 PP

  == domain 4    score: 0.0 bits;  conditional E-value: 1.2
  PF13431.1   1 lyekaleldPnnadayn 17 
                l++k+l+++ ++a +y+
  MMETSP1325-20131115|601_1 140 LFKKLLKKAEEDAANYT 156
                699*********99986 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.6   1.6e+03      40      69 ..      32      63 ..      22      64 .. 0.72
   2 ?    8.8   0.1   0.00054      0.53      17      83 ..      84     150 ..      68     165 .. 0.76
   3 ?   -1.3   0.8       0.6   5.9e+02     433     468 ..     203     238 ..     195     262 .. 0.66

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 1.6
  PF12569.3 40 vlelkaelllkLgrke..eAekvyraLlernp 69
               v+elk +  +++g+k+  eAe++y++ +e np
  MMETSP1325-20131115|601_1 32 VEELKSRAKVSVGQKNwpEAEALYTKAIEVNP 63
               56666666677766655599999999999887 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00054
  PF12569.3  17 agkleeALehLeekekkivDklavlelkaelllkLgrkeeAekvyraLlernpenkeYyeglekakg 83 
                +g++ +ALe  +e   +     +    k++ + kL+r +eA ++y++ +   penk + + l+ka+ 
  MMETSP1325-20131115|601_1  84 MGNFAQALEDANEAVAADASYSKGFYRKGQACSKLNRFSEAVAAYTSGVALEPENKLFKKLLKKAEE 150
                5666677776655555555555556689*******************************99999972 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.6
  PF12569.3 433 ekaekeeekkaaekkakkedeetkkkdpdplgekLa 468
                ++++k +++ka+ ++ +++  +++++d+d++g +L 
  MMETSP1325-20131115|601_1 203 QARKKDASAKATPAAPRAQAADSEEEDEDLKGVNLR 238
                223333334444455555566667777787777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.78u 0.38s 00:00:01.16 Elapsed: 00:00:00.84
# Mc/sec: 1243.82
//
Query:       MMETSP1325-20131115|598_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-12   47.2   0.5    5.5e-12   45.5   0.4    1.8  1  PF12695.2  Alpha/beta hydrolase family
    7.6e-05   22.6   1.3    0.00051   19.8   0.9    2.1  1  PF12697.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.061   13.0   0.1       0.19   11.4   0.0    1.9  2  PF12146.3  Putative lysophospholipase
      0.073   12.3   0.0       0.11   11.8   0.0    1.3  1  PF02230.11 Phospholipase/Carboxylesterase


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.4   1.6e-15   5.5e-12       1     142 []      64     266 ..      64     266 .. 0.81

  Alignments for each domain:
  == domain 1    score: 45.5 bits;  conditional E-value: 1.6e-15
  PF12695.2   1 lvvlvhGaggdssayeplaealakr.gfavvavdlpghgas....egaa...........aakrvl.........................aadll....dleriilvGhSlGGgvalelagrddrvkglvllap.....f.................pdgedlakltlpvllihGtrDgvvppeeaeklakalpgdaelvviegasHf 142
                +++++hG++ d     +  + +a++ g +v+a+d+ g++ s     g +           a    +                         +a+++    +++    +G  lG  +a+ la+r+ + +g+ l++p     +                  + e++ ++t+p+ ++hG++D+vvp++  + l++  +++ae ++i++ +H+
  MMETSP1325-20131115|598_1  64 TILYSHGNAEDLGIILDEIDLMARAtGANVLAYDYVGYSVSylqeGG-RpseagcirsvdA----VwahlttkegipaxstlvqkkftftgYASHAptlvQIKSSSSAGP-LGPXPAVDLASRHTDSAGVLLISPissgvWvvagrtasrllyaadifRNYEKIGRITAPIAIVHGEADEVVPVSCGRHLHSISQNPAEPLWIPQHGHN 266
                699********************999**************9876433.2567776663331....146678888889999989999998884444456556656666664.999*********************777761556666666666777745589*****************************9999*************6 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.9   1.5e-07   0.00051     169     225 ..     216     276 ..      65     279 .. 0.76

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 1.5e-07
                H..HHHTT--S-EEEEE-----HHHHHHHHHHHHHSTT.EEEEE---SSSS.-...-HHHH CS
  PF12697.2 169 r..ealarldvPvlviageaDrvvppeearrlaealpg.arvvvlpgagHl.lfleapdev 225
                r  e ++r+++P+ +++geaD+vvp++  r+l   + + a+  ++p+ gH+ ++ e+ +++
  MMETSP1325-20131115|598_1 216 RnyEKIGRITAPIAIVHGEADEVVPVSCGRHLHSISQNpAEPLWIPQHGHNdMPAERVEQF 276
                223677788***********************98776449**********96666776666 PP

>> PF12146.3  Putative lysophospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.6e-05      0.19      13      58 ..      58     105 ..      48     129 .. 0.75
   2 ?   -3.0   0.0       1.8     6e+03      16      27 ..     225     236 ..     217     242 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.6e-05
  PF12146.3  13 ep.pkaavvlvhglaEhsgrYqelaedLaa.qGyavyayDhrGhGkse 58 
                +p ++++++++hg aE  g   + ++ +a+  G +v+ayD+ G   s 
  MMETSP1325-20131115|598_1  58 TPgARRTILYSHGNAEDLGIILDEIDLMARaTGANVLAYDYVGYSVSY 105
                34479**************8777777776548***********87764 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 1.8
  PF12146.3  16 kaavvlvhglaE 27 
                +a + +vhg a+
  MMETSP1325-20131115|598_1 225 TAPIAIVHGEAD 236
                577899999775 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.2e-05      0.11     155     183 ..     225     253 ..     204     283 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.2e-05
  PF02230.11 155 kipilqlHgeeDevvplalgkaakellkt 183
                   pi  +Hge Devvp++ g++++ + ++
   MMETSP1325-20131115|598_1 225 TAPIAIVHGEADEVVPVSCGRHLHSISQN 253
                 479*******************9987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.33s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 1293.13
//
Query:       MMETSP1325-20131115|605_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-16   60.0   0.0    1.1e-14   53.5   0.0    2.2  2  PF04815.10 Sec23/Sec24 helical domain
    8.8e-05   22.0   0.0    0.00016   21.1   0.0    1.4  1  PF00626.17 Gelsolin repeat


Domain annotation for each model (and alignments):
>> PF04815.10  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   1.7e-18   1.1e-14       2      82 ..      30     108 ..      29     110 .. 0.96
   2 !    4.3   0.0    0.0034        23      80     101 ..     120     141 ..     116     143 .. 0.89

  Alignments for each domain:
  == domain 1    score: 53.5 bits;  conditional E-value: 1.7e-18
  PF04815.10   2 eAvavllarkaieklltsslkdvrkaldkklvdilaayrkyvkgssssgqlrlpeslkllPlyilaLlKspalrvfnvspD 82 
                 +A+ +  ++  + +ll+++l+ vr+a+++ ++d l +yr+ +++ s +gql+lpeslkl+Ply+l+LlKs  lr+  +spD
   MMETSP1325-20131115|605_1  30 DAIFTANVKLHVPRLLKEPLNVVRDAFTELCADALYNYRVTCAKTSPAGQLILPESLKLMPLYTLGLLKSVGLRP--NSPD 108
                 79999999*****************************************************************99..6666 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0034
  PF04815.10  80 spDerayarhlllsldvenlli 101
                 + Dera+ +++l+ ++v+ + +
   MMETSP1325-20131115|605_1 120 RADERAVSLSMLEDMPVSASYR 141
                 68***************99865 PP

>> PF00626.17  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   2.3e-08   0.00016       2      51 ..     172     223 ..     171     235 .. 0.92

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 2.3e-08
                 SEEEEEECSSGGGEBTTSEEEEEESSEEEEEEH--..SHHHHHHHHHHHHHH CS
  PF00626.17   2 svlppvvplsqsslesgdvyLLdtgftiylWiGkg..ssqeeknfaadlaae 51 
                 + lp + p+s+++l++ +++LLd g+++ l +Gk+  ++++ +++a+++a +
   MMETSP1325-20131115|605_1 172 FALPLPIPCSAEHLSNSGAFLLDGGSHLLLQVGKDapPDLLDEVLATSHADP 223
                 56899******************************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.63
# Mc/sec: 1148.73
//
Query:       MMETSP1325-20131115|602_1  [L=675]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-18   65.8  36.6    6.4e-17   61.2  21.2    2.1  2  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2  21.2   4.7e-21   6.4e-17      38     352 ..      21     364 ..       6     366 .. 0.71
   2 !   10.8   1.2   9.6e-06      0.13     125     187 ..     356     419 ..     354     464 .. 0.75

  Alignments for each domain:
  == domain 1    score: 61.2 bits;  conditional E-value: 4.7e-21
  PF07690.11  38 ltlyslgyaiasllaGrlsdrfGrrrvlllglllfalglllllfa.......sslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslgWrav..Flilailsllaavlvllllprepperkrkspaeel................................rkepaplvpawklllkppvlwillialllfffvfsg......lltllplylqevlglsp..glllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalglallaftssavwlllvlvliGfglglvfptllalasdlappeerGtasglfntagslggal 352
                 ++l ++ +++   +aG+l dr+G r++ ++g+l++a+gl+ ++ a       ss+  ++++  + +G g   ++ + + +   wf +e++++++g++++ + l+ +++ l++ +l  ++g++ v  Fl l i+++++av+ +l++p+ + +  + + +  +                                ++ ++++         +++l  +  +l+++f ++++      + + + +y ++ ++  +   l+ ++    l++ +g++ ++++g+l d+lg  r+++l+ +++++++l+l++ + t    +++++ + i fg++l+++ ++ + ++++ppe  G+ +g+  t+ +l++  
   MMETSP1325-20131115|602_1  21 YGLSMVMMLAIGSPAGWLFDRLGGRWCGVAGALIAAVGLAGMAAAtryakggSSSL-MFIAYPLCMGGG---MLNTYSLYSFLWFLPEHQSFVTGVAGGVMTLSDMFA-LVAVWLHNAFGFSIVpfFLGLSIAAAVVAVVSALVVPEHHVTMATAAVVMSGrsvddvtetdvaneiakqsdrsearagicspdGPIRRSCEV------MRRHL--AASMLIMVFSCVYFqslntpT-MDMLFYYKTIFDTETsnDLVDVY--ALLYGGGGFVCSMYGGALCDKLGLARFIALISVVVMITTLSLLVRSYT----AQIMAQLSIVFGMSLYTIVVTRFSMHYCPPELFGSFTGVLFTYIGLMMGA 364
                 5567778899****************************554443245557755556.888888888888...5666777788899999********************.999**********99767777777777777766666444444444444444466666666666666555555544444443333333333333......33333..444444444444441234432.33333447777777798777777..6666666666688**********9888888888888888888888888....88888888999********************************9998765 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 9.6e-06
  PF07690.11 125 gllsagfslGailgpllggllasslgWravFlilailsllaav.lvllllprepperkrkspae 187
                  +++++++++a+  ++l +ll  +l ++a+F+++++ ++ +++ l +++ + +pp+++  + + 
   MMETSP1325-20131115|602_1 356 TYIGLMMGASAAANAALVALLPKNLQYSAPFVFFGLTAAALGLhLSWWWSRNPPPNEGAATAQG 419
                 5677888888888899999999*********************776666666666666555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       876  (0.0640726); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.14u 0.37s 00:00:01.50 Elapsed: 00:00:00.85
# Mc/sec: 1902.99
//
Query:       MMETSP1325-20131115|606_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-08   34.5   5.1    2.3e-08   34.5   3.5    4.5  3  PF04419.9  4F5 protein family
  ------ inclusion threshold ------
       0.51   10.7   4.5        0.8   10.1   3.1    1.4  1  PF03955.9  Adenovirus hexon-associated protein (IX)
       0.66    9.1   6.9       0.84    8.8   4.8    1.2  1  PF03781.11 Formylglycine-generating sulfatase enzyme
          1    9.3  20.4        1.6    8.6  14.1    1.3  1  PF12572.3  Protein of unknown function (DUF3752)
        1.5    7.8  17.5        1.7    7.6  12.1    1.0  1  PF09507.5  DNA polymerase subunit Cdc27
        2.6    7.2   7.7        3.3    6.9   5.3    1.3  1  PF03839.11 Translocation protein Sec62
        3.3    6.9  12.2        4.2    6.6   8.5    1.2  1  PF14153.1  Spore coat protein CotO
        6.1    5.2   6.0          6    5.2   4.2    1.1  1  PF04499.10 SIT4 phosphatase-associated protein
        9.2    3.8  17.5         11    3.6  12.1    1.0  1  PF05110.8  AF-4 proto-oncoprotein


Domain annotation for each model (and alignments):
>> PF04419.9  4F5 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   3.5   1.5e-11   2.3e-08       1      35 [.       1      31 [.       1      34 [. 0.94
   2 ?  -18.0  18.3         9   1.4e+04      33      34 ..      65      66 ..      36      91 .. 0.48
   3 ?    0.6   0.6      0.58   8.8e+02      12      23 ..     102     109 ..      93     121 .. 0.59

  Alignments for each domain:
  == domain 1    score: 34.5 bits;  conditional E-value: 1.5e-11
               ----GGGTTTSTTT---SS...-------S----T CS
  PF04419.9  1 MaRGnQReqaRERNaKKaakkkgkgaksqlkaaak 35
               MaRGnQRe+aRE+ aKK     ++g+k + +aa++
  MMETSP1325-20131115|606_1  1 MARGNQRELAREKSAKKS----AGGTKAGSTAANA 31
               ******************....889*******986 PP

  == domain 2    score: -18.0 bits;  conditional E-value: 9
               -- CS
  PF04419.9 33 aa 34
               ++
  MMETSP1325-20131115|606_1 65 ER 66
               33 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.58
                TTT---SS...- CS
  PF04419.9  12 ERNaKKaakkkg 23 
                + Na+K+    +
  MMETSP1325-20131115|606_1 102 AANAEKK----K 109
                3344443....2 PP

>> PF03955.9  Adenovirus hexon-associated protein (IX)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.1   0.00053       0.8      23     103 ..      23     101 ..      19     121 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00053
  PF03955.9  23 vvGsnvdGrpVaPansstltyatvssstldtaaaaaastsaaaatarslaeeveslselkskvsaleekltvllaeLeelk 103
                ++Gs+   +  +P++      + ++++++++aaaaa+  ++a+ +a   a++ +  ++ ++ +s+++  +++l++ L+ +k
  MMETSP1325-20131115|606_1  23 KAGSTAANAGLTPEQRRERDAKALAEKQARKAAAAAEDPQEAERQAAASAAKAK--KKANKTTSSNQAMNQMLKEGLKGAK 101
                579999999999999999999999999999999999866666665555555554..4444444455666777777777665 PP

>> PF03781.11  Formylglycine-generating sulfatase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   4.8   0.00055      0.84      99     173 ..      41     118 ..       6     123 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00055
                 HHHHHHHHH---......B---HHHHHHHH--------S-----S----..-----.-TTT-B-----...--S.--- CS
  PF03781.11  99 eDavaYArwlgkktgegyrLPteaEweyAArggkkgreypwgdelkpak..niwqG.slakfekeaaaadsqngrtsp 173
                 +Da+a A+++ +k +   + P eaE + AA++ k++++   + ++++a     ++G + ak +++++++  ++ + sp
   MMETSP1325-20131115|606_1  41 RDAKALAEKQARKAAAAAEDPQEAERQAAASAAKAKKKANKTTSSNQAMnqMLKEGlKGAKAANAEKKKXRKEEKLSP 118
                 79******************************9955555555544444344667776666666666666666655555 PP

>> PF12572.3  Protein of unknown function (DUF3752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6  14.1    0.0011       1.6      18     112 ..      15     108 ..       2     120 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0011
  PF12572.3  18 nrkFskgtrsargdtssWtetpeekakrladevlgkeakasaaaseaeekkrakedaemakkvdeynekkrgksLveqhqekqkkkkkekkdeee 112
                ++k + gt++++ + +    tpe++++r a+++++k+a+++aaa+e++++++++ +a++ak+ ++ n+++ ++  ++q  ++  k  k +++e++
  MMETSP1325-20131115|606_1  15 AKKSAGGTKAGS-TAANAGLTPEQRRERDAKALAEKQARKAAAAAEDPQEAERQAAASAAKAKKKANKTTSSNQAMNQMLKEGLKGAKAANAEKK 108
                356666666555.6666677******************999988888888888888888888888888888888888877777666666533332 PP

>> PF09507.5  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  12.1    0.0011       1.7     151     252 ..      21     123 ..       2     146 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0011
  PF09507.5 151 askalkktangk.aaskpsksiaksevksksakktqdssketktektekktsvkaasskkkaseksnamssffkkktkekkkkkeaseskvkeeseeeseked 252
                 +ka+ ++an+  + ++  +  ak+ +++++ k++  ++++ ++e + ++++ ka+++  k+ ++ +am+++ k+  k +k+ + ++++  kee+ ++ +++ 
  MMETSP1325-20131115|606_1  21 GTKAGSTAANAGlTPEQRRERDAKALAEKQARKAAAAAEDPQEAERQAAASAAKAKKKANKTTSSNQAMNQMLKEGLKGAKAANAEKKKXRKEEKLSPLSPDA 123
                1223344444444455555555555555555555555555555555555555555555556678889999999999999999998888888888766655555 PP

>> PF03839.11  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   5.3    0.0022       3.3      14      98 ..      44     130 ..       6     136 .. 0.60

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0022
  PF03839.11  14 raledekykkek.dkkkaeiaetkk.skkeeskekk.kekakeekkdteaeevdkelkkeekkeekkkkkkkkvkLevneeqafvDgd 98 
                 +al +++ +k    ++ ++ ae +  ++  + k+k+ k    ++ ++++  e  k +k  +++++k +k++k  +L+ +      D +
   MMETSP1325-20131115|606_1  44 KALAEKQARKAAaAAEDPQEAERQAaASAAKAKKKAnKTTSSNQAMNQMLKEGLKGAKAANAEKKKXRKEEKLSPLSPDAVGRVCD-Q 130
                 44444443332202222222222220222233333303344556677777776666677666666666656666688777766666.4 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   8.5    0.0028       4.2      46     120 ..      41     112 ..       5     141 .. 0.39

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0028
  PF14153.1  46 snekkkekeeeqkeekaeveseeeaeeaesedeqesseqeeiaqeve....eeeeeeeekqeevekekeaekeetelee 120
                +++k+ ++++     ka++++e+ +    + ++q +++ ++++++++     +++ +++ +e  + +k+a++e+ +  +
  MMETSP1325-20131115|606_1  41 RDAKALAEKQA---RKAAAAAEDPQ----EAERQAAASAAKAKKKANkttsSNQAMNQMLKEGLKGAKAANAEKKKXRK 112
                22222111111...11111111111....11111111111111112100012222222222222222222222222221 PP

>> PF04499.10  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   4.2     0.004         6     281     342 ..      32      97 ..       1     139 [. 0.54

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.004
  PF04499.10 281 e....qdsaedkreleasnasedseeededdeeseeseeseesaaelteeklrsdpvvgDylkikl 342
                      q  ++d++ l++++a +   + ++++e++ +++ s+ +a+++ ++ ++s+  +  +lk+ l
   MMETSP1325-20131115|606_1  32 GltpeQRRERDAKALAEKQARKAAAAAEDPQEAERQAAASAAKAKKKANKTTSSNQAMNQMLKEGL 97 
                 133334555555555555555555555555555555555555555555555555555555555544 PP

>> PF05110.8  AF-4 proto-oncoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6  12.1    0.0072        11     531     637 ..      11     119 ..       2     138 .. 0.64

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.0072
  PF05110.8 531 skekkekssskeerrpraaqkapesgrgk.qkspaqsetvarr.tvgkkqpkkaekasagee.ktslkaeseaaalklksseqlskerpkaktkgsrkaaakkEpkssvp 637
                 +++ +ks+  +++ + aa+ +  + +++ + + a +e +ar+ ++++++p+ ae+++a+ + k+ +ka++++ + ++  ++ l++  ++ak + ++k   +kE k s+ 
  MMETSP1325-20131115|606_1  11 REKSAKKSAGGTKAGSTAANAGLTPEQRReRDAKALAEKQARKaAAAAEDPQEAERQAAASAaKAKKKANKTT-SSNQAMNQMLKEGLKGAKAANAEKKKXRKEEKLSPL 119
                4445556666666666666666544444434455555655555156678999999999888856666666666.445555666677777788888899999999997764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2253  (0.164789); expected 273.4 (0.02)
Passed bias filter:                     1009  (0.0738005); expected 273.4 (0.02)
Passed Vit filter:                       161  (0.0117759); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.72u 0.47s 00:00:01.19 Elapsed: 00:00:00.65
# Mc/sec: 615.68
//
Query:       MMETSP1325-20131115|604_1  [L=398]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-72  242.8   0.0      3e-72  242.1   0.0    1.3  1  PF00485.13 Phosphoribulokinase / Uridine kinase family
     0.0005   20.7   0.2      0.002   18.8   0.2    2.2  1  PF13207.1  AAA domain
     0.0017   18.5   0.0     0.0057   16.8   0.0    1.9  2  PF13238.1  AAA domain
  ------ inclusion threshold ------
      0.026   12.7   0.0      0.045   11.9   0.0    1.3  1  PF07230.6  Bacteriophage T4-like capsid assembly protein (Gp20)
       0.13   12.0   0.1       0.34   10.6   0.0    1.7  2  PF11166.3  Protein of unknown function (DUF2951)


Domain annotation for each model (and alignments):
>> PF00485.13  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.1   0.0   1.1e-75     3e-72       1     193 [.      52     255 ..      52     256 .. 0.99

  Alignments for each domain:
  == domain 1    score: 242.1 bits;  conditional E-value: 1.1e-75
  PF00485.13   1 vIgvagsSGaGkttvarklesifgrekvkaae............ldsflrldraekdlkledrkaakekevsalspeandfdllyevlkelkegksvekpiYnhvtgeadpkeeliegadilviEGlhglydervadllDlkiyvdisidlelaqklqRDiaeRGrsleavldsiearkpdyvkyiapqfseadliiqrvptvdt 193
                 +Igva++SG+Gk+t++r+l++ fg+ +v +++            l+s+  ++++++d++l+dr+++k ++ +al+  +n+fdl++e+l++lk+gk+++kpiYnhv+g++d+ +e i++++i+++EGlh++yderv++l+D+++y+dis+++++a+k+qRD++eRG+sle++++sie rkpd+++++apq  + dl+i ++pt ++
   MMETSP1325-20131115|604_1  52 LIGVAADSGCGKSTFMRRLVQNFGGSNVGPLGggfgnggwetntLVSDDVTVICLDDYHLNDREGRKVTQRTALDGAENNFDLMFEQLAALKSGKTIQKPIYNHVNGTLDT-PEEIKPTNIVIVEGLHPFYDERVRELMDFSVYLDISDEIKFAWKIQRDMEERGHSLESIKASIESRKPDFDEFVAPQRGYSDLVISVLPTDLV 255
                 69*****************************9************9******************************************************************.*****************************************************************************************9876 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.2   7.1e-07     0.002       8     115 ..      59     214 ..      52     348 .. 0.76

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 7.1e-07
                TT---HHHHHHHHHHST.........................EEEEEGGGB.-.-GGGS-B-----B--SSGGGB-HHHHHHHH.........................H..HHHHHHTTS.-----------EEEEE----TTGGTTT-S.SEEEEH CS
  PF13207.1   8 pGsGKsTlakeLaerlg.........................lpvlslddl.l.reeglkelddgereskdadadllaaildglaa.....................kkdtlswvidgale.seldlrleeadeiiyldaplpecrkrllk.rrlere 115
                +G+GKsT++++L + +g                         + v+ ldd+ l  +eg k ++++ ++  +++ dl  + l++l+                       k t +++++g +  ++  +r    d  +yld++++  +++++  r +e++
  MMETSP1325-20131115|604_1  59 SGCGKSTFMRRLVQNFGgsnvgplgggfgnggwetntlvsddVTVICLDDYhLnDREGRKVTQRTALDGAENNFDLMFEQLAALKSgktiqkpiynhvngtldtpeeIKPTNIVIVEGLHPfYDERVRE-LMDFSVYLDISDE-IKFAWKIqRDMEER 214
                8**************843444444444555555555555555889999993234334444555555444444444444445555335556667777778888888987777888888855544444344.4555999999998.66666663555554 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.1e-06    0.0057       1     104 [.      53     201 ..      53     225 .. 0.70
   2 ?   -3.2   0.0       3.1   8.6e+03      71      85 ..     329     343 ..     316     347 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2.1e-06
  PF13238.1   1 IlitGtpGvGKtTlakeLaerl...................gdvlrdlakengleeevddkidtkeskeldedkldelldkleenes...............................elaegenviidghlaeleledlkdlkl..vvLradpee 104
                I+++  +G+GK+T  ++L +++                      ++d +    l +++ ++   +e +++ ++    +ld+ e+n +                               e++  ++vi++g +   ++e+ ++l+   v+L+ ++e+
  MMETSP1325-20131115|604_1  53 IGVAADSGCGKSTFMRRLVQNFggsnvgplgggfgnggwetNTLVSDDVTVICLDDYHLND---REGRKVTQRT---ALDGAENNFDlmfeqlaalksgktiqkpiynhvngtldtpeEIKPTNIVIVEGLHPF-YDERVRELMDfsVYLDISDEI 201
                7788899**************8889999999999999666633333333333333333333...4444444444...4444444444555566689999999999999999******56666666566655555.58888888888********97 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 3.1
  PF13238.1  71 aegenviidghlael 85 
                + +e +++++hl++ 
  MMETSP1325-20131115|604_1 329 NLQELIYVESHLSNT 343
                446788999998875 PP

>> PF07230.6  Bacteriophage T4-like capsid assembly protein (Gp20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.6e-05     0.045     321     352 ..     102     133 ..      92     139 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.6e-05
  PF07230.6 321 alsmleDywLpRRdGkkgtevstlpGgqnlge 352
                ++  l+Dy+L+ R+G+k+t+ ++l+G++n  +
  MMETSP1325-20131115|604_1 102 TVICLDDYHLNDREGRKVTQRTALDGAENNFD 133
                555789*********************98655 PP

>> PF11166.3  Protein of unknown function (DUF2951)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00012      0.34      11      50 ..     123     162 ..     114     169 .. 0.87
   2 ?   -3.7   0.0       3.6   9.9e+03      12      19 ..     206     213 ..     197     228 .. 0.47

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00012
  PF11166.3  11 rrikrleendkkifesldkikegqktqekvnqkldltlds 50 
                  +   e+n + +fe+l  +k+g+  q+ +++ ++ tld 
  MMETSP1325-20131115|604_1 123 TALDGAENNFDLMFEQLAALKSGKTIQKPIYNHVNGTLDT 162
                55677899******************************96 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 3.6
  PF11166.3  12 rikrleen 19 
                +i+r  e+
  MMETSP1325-20131115|604_1 206 KIQRDMEE 213
                44332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.40s 00:00:01.18 Elapsed: 00:00:00.70
# Mc/sec: 1362.50
//
Query:       MMETSP1325-20131115|609_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   13.2   0.1      0.057   12.8   0.0    1.2  1  PF07837.7 Formiminotransferase domain, N-terminal subdomain
      0.063   13.3   0.1        0.1   12.6   0.1    1.5  1  PF13837.1 Myb/SANT-like DNA-binding domain


Domain annotation for each model (and alignments):
>> PF07837.7  Formiminotransferase domain, N-terminal subdomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   8.3e-06     0.057     111     164 ..      42      94 ..      31     115 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 8.3e-06
  PF07837.7 111 krigeelqvpvyLyeeaaaeperknlaaiRkgeyeglkeklkeeewkPDfGpee 164
                kr++++l++ + Lye  a++   +++ +iRk + egl+ ++k ++ +P++ +e+
  MMETSP1325-20131115|609_1  42 KRMKKHLSLDLALYE-YAEKIFDERIMQIRKDQAEGLRCRYKWKKVSPEYTDER 94 
                678889999999**9.788999999*****************999988764433 PP

>> PF13837.1  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.5e-05       0.1      51      83 ..      74     106 ..      28     118 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.5e-05
                --HHHHHHHHHHHHHHHHHS--S------S--- CS
  PF13837.1  51 rspkqCkdKwenLkkrYkkekerksgrgsswpf 83 
                 +   C+ Kw++++ +Y  e++ ++g +++ p+
  MMETSP1325-20131115|609_1  74 AEGLRCRYKWKKVSPEYTDERDXGTGPPRTTPH 106
                34458*******************999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 619.44
//
Query:       MMETSP1325-20131115|608_1  [L=362]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-08   31.6   0.8    7.1e-08   31.6   0.5    1.7  2  PF06803.7  Protein of unknown function (DUF1232)
    1.5e-07   30.8   7.3    2.5e-07   30.1   5.1    1.3  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
      2e-07   30.4   9.9    3.4e-07   29.7   6.9    1.4  1  PF13639.1  Ring finger domain
    2.7e-07   30.0  11.0    4.6e-07   29.2   7.6    1.4  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    2.2e-06   27.2  10.9    3.6e-06   26.5   7.6    1.4  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.015   14.7   4.5      0.018   14.4   2.4    1.7  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
      0.076   12.5   0.0       0.15   11.6   0.0    1.4  1  PF06365.7  CD34/Podocalyxin family
      0.084   12.5   2.6        1.2    8.9   0.0    2.5  2  PF14255.1  Cysteine-rich CPXCG
       0.11   12.5   4.8       0.22   11.5   3.3    1.5  1  PF12678.2  RING-H2 zinc finger
       0.18   11.5   3.4       0.42   10.3   2.4    1.6  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
       0.39   10.6   9.0       0.98    9.3   6.2    1.7  1  PF11793.3  FANCL C-terminal domain
        5.2    6.9  10.9        5.7    6.7   5.9    2.2  2  PF01485.16 IBR domain


Domain annotation for each model (and alignments):
>> PF06803.7  Protein of unknown function (DUF1232)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.5       4.1   4.7e+03       5      13 ..      42      50 ..      40      50 .. 0.75
   2 !   31.6   0.5   6.2e-11   7.1e-08       6      34 ..     210     239 ..     205     242 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 4.1
  PF06803.7  5 llilaaLlY 13
               l++++a+lY
  MMETSP1325-20131115|608_1 42 LILILAVLY 50
               678888888 PP

  == domain 2    score: 31.6 bits;  conditional E-value: 6.2e-11
  PF06803.7   6 lilaaLlYfvsPiDlIPD.fipvlGylDDl 34 
                 +l  +lY++sP+Dl+P+ +++++G lDD 
  MMETSP1325-20131115|608_1 210 SLLVSILYIISPVDLLPEaVLGIVGVLDDX 239
                58999************************5 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   5.1   2.2e-10   2.5e-07       4      48 ..      80     130 ..      77     132 .. 0.95

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 2.2e-10
  PF13920.1   4 tCvvClereadvlllpCgHlclCeeCaerllk.......rkkkCpiCrspie 48 
                 C++C+e ++  + + CgH+ +C +C + + k       +  +Cp+Cr++++
  MMETSP1325-20131115|608_1  80 DCPICMEPKKYGCETMCGHA-FCTNCLSTYWKslpqgtrSPLSCPYCRQEVT 130
                7*******************.**********9******99*********997 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   6.9     3e-10   3.4e-07       2      46 .]      80     128 ..      79     128 .. 0.83

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 3e-10
  PF13639.1   2 eCaiCldelsegeevvrlpCgHvfHeeCldewlrs..sn.....sCPlCrkp 46 
                +C+iC+++    +  +++ CgH f+ +Cl+ + +s  ++     sCP+Cr++
  MMETSP1325-20131115|608_1  80 DCPICMEPK---KYGCETMCGHAFCTNCLSTYWKSlpQGtrsplSCPYCRQE 128
                7*******7...799****************9866332145578******85 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   7.6   4.1e-10   4.6e-07       1      41 []      81     125 ..      81     125 .. 0.97

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 4.1e-10
                 -TTTSSS-SSEE.BSCTS-EE-CHHHHHHHCS.....T-----TTT CS
  PF00097.20   1 CpiCleeakepnelleCkHsfCskCirkilks.....rkkvkCPlC 41 
                 CpiC+e  k  +  + C+H+fC++C+++++ks     r+  +CP C
   MMETSP1325-20131115|608_1  81 CPICMEPKKYGC-ETMCGHAFCTNCLSTYWKSlpqgtRSPLSCPYC 125
                 ************.**********************9999999***9 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   7.6   3.2e-09   3.6e-06       4      46 .]      80     127 ..      77     127 .. 0.82

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 3.2e-09
  PF13923.1   4 sCpiCleelenpviltpCgHlyCkkCieqwlekskkk.......CPiCrn 46 
                 CpiC+e  +     t CgH +C +C++ ++++  ++       CP Cr+
  MMETSP1325-20131115|608_1  80 DCPICMEPKKYGC-ETMCGHAFCTNCLSTYWKS-LPQgtrsplsCPYCRQ 127
                7********9984.5*****************9.5534444555****96 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   2.4   1.6e-05     0.018      12      58 .]      80     124 ..      70     124 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.6e-05
                B-TTT-S-SS....EEEES---EEEHHHHHHHHH...HHHTTT--B---- CS
  PF13445.1  12 aCpiskeqsteqnpPvvLpCGhvisrealeklak...ggrsnkgrfkCPy 58 
                 Cpi++e +    + +   CGh ++ ++l+ ++k   +g+  ++ + CPy
  MMETSP1325-20131115|608_1  80 DCPICMEPKKYGCETM---CGHAFCTNCLSTYWKslpQGT--RSPLSCPY 124
                5999999544444444...**************9655332..44799998 PP

>> PF06365.7  CD34/Podocalyxin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00013      0.15      99     136 ..      27      64 ..      13      76 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00013
  PF06365.7  99 lp.llialvtlgaillLiialltlYclhqRrsqkkkqqr 136
                 + l+i lv ++a  lLi++l  lYc   Rr +++ +q+
  MMETSP1325-20131115|608_1  27 RGlLVIELVLVCAP-LLILILAVLYCGKGRRRPTRRRQH 64 
                35588999999955.566666666**9998888776664 PP

>> PF14255.1  Cysteine-rich CPXCG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.7     0.096   1.1e+02      20      33 ..      72      87 ..      66     100 .. 0.74
   2 ?    8.9   0.0    0.0011       1.2       2      15 ..     121     134 ..     120     140 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.096
  PF14255.1 20 dqeYi..eDCqvCCrp 33
               d+eY+   DC++C +p
  MMETSP1325-20131115|608_1 72 DEEYVpeVDCPICMEP 87
               6666643588888777 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0011
  PF14255.1   2 sCPyCgesievliD 15 
                sCPyC +++++l++
  MMETSP1325-20131115|608_1 121 SCPYCRQEVTLLVE 134
                8*********9987 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.3   0.00019      0.22      32      75 .]      80     126 ..      70     126 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00019
  PF12678.2  32 lcpeckapgksdecpvawgeCgHaFHlhCiskWlktrk.......tCPlcr 75 
                 cp c  p+ +  c+ +   CgHaF ++C+s++ k+         +CP cr
  MMETSP1325-20131115|608_1  80 DCPICMEPK-KYGCETM---CGHAFCTNCLSTYWKSLPqgtrsplSCPYCR 126
                577777777.4558886...**********998875444667899*****8 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.4   0.00037      0.42      35      83 ..      81     131 ..      74     133 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00037
  PF12861.2  35 cpsckfpGdd.cplvlGkckhnfhlhcilkwlet....etskglcpmcrqtfkl 83 
                cp c  p    c      c h+f + c+ ++ ++      s   cp crq+++l
  MMETSP1325-20131115|608_1  81 CPICMEPKKYgCE---TMCGHAFCTNCLSTYWKSlpqgTRSPLSCPYCRQEVTL 131
                7777777653144...4699********8754431211456678******9875 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   6.2   0.00086      0.98       2      67 ..      78     131 ..      77     134 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00086
                --S-SSS--SS--------B--S-TT----B-SGGGHHHHHHHH----TTT------TTT-S---G CS
  PF11793.3   2 eveCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrslkesrqsfdvlfGeCPyCkkkisv 67 
                ev+C+iC+  +        + C+ + C++ f ++CL  + +sl+++ +s      +CPyC++ +++
  MMETSP1325-20131115|608_1  78 EVDCPICMEPKK-------YGCE-TMCGHAFCTNCLSTYWKSLPQGTRSP----LSCPYCRQEVTL 131
                689999998887.......8897.57******************998874....47******9985 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.9     0.005       5.7      20      58 ..      75     108 ..      59     122 .. 0.68
   2 ?   -0.6   0.1      0.96   1.1e+03      41      49 ..     120     128 ..     109     129 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.005
  PF01485.16  20 wCprpdCeaiiekekgakkssvtCsk.CgfefCflCkkew 58 
                 + p+ dC   +e++k        C++ Cg++fC++C++ +
   MMETSP1325-20131115|608_1  75 YVPEVDCPICMEPKK------YGCETmCGHAFCTNCLSTY 108
                 555555555555555......457655*********9987 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.96
  PF01485.16  41 vtCskCgfe 49 
                   C+ C++e
   MMETSP1325-20131115|608_1 120 LSCPYCRQE 128
                 789999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       473  (0.0345963); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.69u 0.38s 00:00:01.06 Elapsed: 00:00:00.75
# Mc/sec: 1156.64
//
Query:       MMETSP1325-20131115|610_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2339  (0.17108); expected 273.4 (0.02)
Passed bias filter:                      526  (0.0384728); expected 273.4 (0.02)
Passed Vit filter:                       125  (0.00914277); expected 13.7 (0.001)
Passed Fwd filter:                        47  (0.00343768); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.30u 0.42s 00:00:01.72 Elapsed: 00:00:01.03
# Mc/sec: 486.25
//
Query:       MMETSP1325-20131115|612_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.06   12.2   7.4      0.087   11.6   5.1    1.3  1  PF02535.17 ZIP Zinc transporter
       0.44    8.6   4.0       0.47    8.5   2.8    1.0  1  PF09726.4  Transmembrane protein
       0.53    8.9   8.4       0.61    8.7   5.8    1.1  1  PF04684.8  BAF1 / ABF1 chromatin reorganising factor
          2    7.6  11.7          3    7.0   8.1    1.3  1  PF04592.9  Selenoprotein P, N terminal region


Domain annotation for each model (and alignments):
>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   5.1   2.5e-05     0.087     138     172 ..      20      53 ..       3      71 .. 0.48

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.5e-05
  PF02535.17 138 naeseeeeteeeesdhdheskeksesdkeselaaa 172
                 ++++++ e+++++++h+h+++++s +  +s+ a +
   MMETSP1325-20131115|612_1  20 RRSVSNLEHHHHHHHHHHQQQQHSAH-VSSTTAPT 53 
                 33334444444444444444333333.33333222 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.8   0.00014      0.47     258     332 ..      25      96 ..       3     112 .. 0.42

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00014
  PF09726.4 258 kdkaknssdkkkekkelqqknhhasksksvqsyssklqeievkenvsnkskksseslags...aeelalkkdsnsssa 332
                +     +++++++++++qq++h +++++s  + ++ ++ i v    +   ++s+ +++ +   a+ +a+  d+ +ss+
  MMETSP1325-20131115|612_1  25 N----LEHHHHHHHHHHQQQQH-SAHVSSTTAPTTVVSVISVDVAIAX-TSLSPAATTCPpptATAAAAAVDEVTSSH 96 
                2....23334444444555555.3333333233333333333333322.23333333333000222222333333333 PP

>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   5.8   0.00018      0.61     305     372 ..      24      90 ..       9     119 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00018
  PF04684.8 305 rdvqhqhqqqsqdqhqeqhqshvdsdnnvyqdrigsisdqdeaavhnlddtnvrvaaaaaaaaaaalq 372
                 + +h+h + + + +q+qh  hv s        +  is +   a   l  +       +a+aaaaa++
  MMETSP1325-20131115|612_1  24 SNLEHHHHHHHHHHQQQQHSAHVSSTTA-PTTVVSVISVDVAIAXTSLSPAATTCPPPTATAAAAAVD 90 
                2334444444444445567777776543.344555566666666667776666665555544444443 PP

>> PF04592.9  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   8.1   0.00087         3     187     223 ..      14      51 ..       2      61 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00087
  PF04592.9 187 kh.hshrkldsekekhkhshehlg.ssslkesqkpdpdk 223
                +h  shr+  s+ e+h+h+h+h++ +++++ +  + + +
  MMETSP1325-20131115|612_1  14 THfISHRRSVSNLEHHHHHHHHHHqQQQHSAH-VSSTTA 51 
                33245655666655555555555513333333.222333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1050  (0.0767993); expected 273.4 (0.02)
Passed bias filter:                      505  (0.0369368); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.61
# Mc/sec: 487.13
//
Query:       MMETSP1325-20131115|611_1  [L=307]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.64
# Mc/sec: 1149.50
//
Query:       MMETSP1325-20131115|615_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.61
# Mc/sec: 212.14
//
Query:       MMETSP1325-20131115|616_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.27s 00:00:00.61 Elapsed: 00:00:00.59
# Mc/sec: 312.74
//
Query:       MMETSP1325-20131115|614_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-54  182.6  15.7    8.4e-54  182.4  10.9    1.0  1  PF06814.8 Lung seven transmembrane receptor
    1.6e-06   27.4  19.5    2.4e-06   26.8  13.5    1.3  1  PF10192.4 Rhodopsin-like GPCR transmembrane domain


Domain annotation for each model (and alignments):
>> PF06814.8  Lung seven transmembrane receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.4  10.9   1.2e-57   8.4e-54       4     295 .]      47     331 ..      44     331 .. 0.94

  Alignments for each domain:
  == domain 1    score: 182.4 bits;  conditional E-value: 1.2e-57
  PF06814.8   4 tGlYslifskcdeelsksksslklkvkvnwknpe.GyLsaseapllplylimslayvllgilWlfilakykkdvlklqkliaavialgmvelafvyleyatinskGssievlavlasilsalkktlsrllllivslGygivkpkLgdllkkvlllgvllfvlaevlelvresseesdssakllkellfllpl..alldlifvlwifrsLsk.tlrkLklrrnlvklelYrkfaivlvisvvasliiilvekvllktvdsvekqWkeaWlitafwellslvllvviaylwrPsqnnq 295
                +GlY+l+f+ c+++   s+ s+++k +  + np  +yLsa e  l+ l+ +  l++++++  W ++l+k  + v k+++++a++++++++ ++f ++ y++i+ +G+  +++ v+++i+  lk+ l++ ++l++++G+++vkp L+d++kk++l++++l+v+ +v+ +v e    ++++   ++ +l l+++  + ++l++++w++r+L +  + ++k+  n++kl l+r+f+i++v ++++++ii+++ +       +++ +W+  Wl   f+el++l + vv++y+++P ++n+
  MMETSP1325-20131115|614_1  47 EGLYTLVFARCQPSD--SAVSVSFKLHAAFWNPGpNYLSACEETLPALFFTFFLFFAAATGTWAWLLVKGGNKVQKIHYMMAVLLVVKTMAMLFESIRYHFISTTGVG-HEWSVIYYIFAFLKGLLLFTVILLIGTGWSLVKPYLNDREKKIVLVVLILQVVDNVALIVLEEMAPGSQEWYTWRDVLHLVDIicCCAILFPIVWSIRHLRQaAAADGKAEHNIMKLTLFRQFYIMVVTYIYFTRIIVFLLA------ATMPYDWM--WLRFLFTELATLSFYVVTGYKFKPMDDNP 331
                8**********9986..6677777777777777549**********************************************************************98.679******************************************************9998888888888889**********999999*************999**********************************994......468999*9..***99********************9996 PP

>> PF10192.4  Rhodopsin-like GPCR transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8  13.5   3.5e-10   2.4e-06      11     231 ..      75     294 ..      65     319 .. 0.70

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 3.5e-10
  PF10192.4  11 lNggdflkshfSadeqgilelflvlvllyivlliinivvi.kalkkreekhtvlkllsvslllelislllllihlivYaynGigiellqilgeildilsqilfllLLlllakGWtitraklsslstvillvlivlivvlqvilvileekfefdsaskihsye..slaGylllalrivlaiyFlyglrnti.......kkekskkkkqFllkfgivgllwflsfPvlviiav 231
                 N+g    + +Sa e  ++ lf++++l++   +     ++   +k  ++ +++  +++v l+++++ +l+  i +  ++++G+g e  +++  i+ +l  +l+++ +ll++ GW   +  l+  ++ i+lv+ +l vv  v l++l e++++ s++ +   +   l+ ++ + + ++ +   ++++r+++       k e++ +k + + +f+i+++ ++    ++v++ +
  MMETSP1325-20131115|614_1  75 WNPG---PNYLSACEETLPALFFTFFLFFAAATGT---WAwLLVKGGNKVQKIHYMMAVLLVVKTMAMLFESIRYHFISTTGVGHE-WSVIYYIFAFLKGLLLFTVILLIGTGWSLVKPYLNDREKKIVLVVLILQVVDNVALIVL-EEMAPGSQEWYTWRDvlHLVDIICCCAILFPI---VWSIRHLRqaaaadgKAEHNIMKLTLFRQFYIMVVTYIYFTRIIVFLLA 294
                5665...66799999***********966665555...6645555555556666677788899*********************55.688999*****************************************************.66566666554433300333333333333333...4455554411112223344447777777777777777665555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       688  (0.0503218); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.76
# Mc/sec: 1154.04
//
Query:       MMETSP1325-20131115|617_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-43  147.9  23.8      2e-43  147.7  16.5    1.1  1  PF13870.1  Domain of unknown function (DUF4201)
  ------ inclusion threshold ------
      0.043   13.1  21.7        2.4    7.5   1.6    4.3  4  PF04977.10 Septum formation initiator
       0.11   10.7   4.4       0.13   10.6   3.0    1.1  1  PF04632.7  Fusaric acid resistance protein family
       0.13   11.9   3.9       0.23   11.1   2.7    1.5  1  PF00714.12 Interferon gamma
       0.24   10.4   5.5        2.9    6.8   0.7    2.2  2  PF10505.4  NMDA receptor-regulated gene protein 2
       0.27   10.6  27.3       0.36   10.2   4.3    2.3  2  PF04156.9  IncA protein
       0.39   10.7   2.6       0.94    9.5   0.2    2.4  2  PF14119.1  Domain of unknown function (DUF4288)
        2.7    7.1   8.4        0.6    9.2   2.7    1.8  2  PF05549.6  Allexivirus 40kDa protein
        3.3    5.2  14.3        2.5    5.7   8.8    1.4  1  PF01496.14 V-type ATPase 116kDa subunit family
        9.7    5.8  22.2        2.3    7.8  11.9    2.3  2  PF07926.7  TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.7  16.5   1.5e-46     2e-43       4     171 ..      26     193 ..      23     199 .. 0.97

  Alignments for each domain:
  == domain 1    score: 147.7 bits;  conditional E-value: 1.5e-46
  PF13870.1   4 krneisklrlklislkhqlakikeklkqkeelgegLhlvdfeqlqienqalnekieernkeLkkLkkkttktvhalthlkeklhfleeeleelkkelkekeeklaklrkelykvklerdklrkenkklrqqggllrkPaLlkDydktvekveekrksveklrrkvkil 171
                k++e  k+rl++i+l+  l+k+++ l+ ke+l+egLhl+dfeql+ienq+lnekieern+eL+kL+kk t++v++lth+kekl+f+++e+   +++l++++++l k r+ l+k+k er+ lr+en+ l+q+ g  +   L  D++ +++++ + r+++++l++ +  l
  MMETSP1325-20131115|617_1  26 KDQEAVKVRLRNINLRMILRKLESSLRAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKNTSNVQVLTHIKEKLQFVSAENGVTRSSLASLDAELSKERDLLTKAKREREALRAENAALKQKQGFTNSDLLVVDFESRKQELVSMREKIADLKQRYSLL 193
                789999************************************************************************************************************************************************************998766 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1      0.01        14      38      63 ..      13      37 ..       8      44 .. 0.85
   2 ?    7.5   1.6    0.0017       2.4       8      41 ..      62      95 ..      57      99 .. 0.81
   3 ?    4.4   1.6     0.017        23      22      52 ..     125     155 ..     116     163 .. 0.61
   4 ?    6.7   0.1    0.0032       4.4      21      47 ..     171     197 ..     165     203 .] 0.52

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.01
  PF04977.10 38 aeneeLeaevkdLksdedyieeqARs 63
                ++  ++ +e ++L +d+++++ + R+
   MMETSP1325-20131115|617_1 13 KRTVQMFQEQENL-KDQEAVKVRLRN 37
                7888999******.6****9988884 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0017
  PF04977.10  8 llifgksgllalyqlkqeiaalqaelaklkaene 41
                +li +++  ++ + l+++i++ ++el+kl+++n+
   MMETSP1325-20131115|617_1 62 HLIDFEQLKIENQTLNEKIEERNEELHKLRKKNT 95
                6666677777888999999999999999999997 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.017
  PF04977.10  22 lkqeiaalqaelaklkaeneeLeaevkdLks 52 
                 l++e+ +  + l k k e+e+L ae + Lk+
   MMETSP1325-20131115|617_1 125 LDAELSKERDLLTKAKREREALRAENAALKQ 155
                 5555555566666666666666666555543 PP

  == domain 4    score: 6.7 bits;  conditional E-value: 0.0032
  PF04977.10  21 qlkqeiaalqaelaklkaeneeLeaev 47 
                 + kqe++   +++a+lk++   L++ v
   MMETSP1325-20131115|617_1 171 SRKQELVSMREKIADLKQRYSLLASVV 197
                 445555555555555555544444444 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.0   9.2e-05      0.13     209     321 ..      78     189 ..      34     200 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9.2e-05
  PF04632.7 209 prlrarvralrallarllallallsslarllaalraaaaatppelaalldelaa.alaaeeleaavaaLrarlaalrpeaeadsdtaaallarlaellaeladalaalralqaa 321
                +++  r++ l+ l+ + ++ + +l ++ + l+ ++a++  t++ la l +el++ ++   + +++++aLra+ aal++++   ++ +++l+  + ++ +el+ +++++++l+++
  MMETSP1325-20131115|617_1  78 EKIEERNEELHKLRKKNTSNVQVLTHIKEKLQFVSAENGVTRSSLASLDAELSKeRDLLTKAKREREALRAENAALKQKQG--FTNSDLLVVDFESRKQELVSMREKIADLKQR 189
                678899***********************************999********99766777888899999999999999999..*************************999886 PP

>> PF00714.12  Interferon gamma
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.7   0.00017      0.23      64     124 ..      20      81 ..      11     107 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00017
                 CCHHHH--TTTTCHHHHHHHHHTHHHH----TCHHHHH.CCCCS---CCC--GGGGGCGGGG CS
  PF00714.12  64 klfenlkdnqaiqkslevikedllvkflnsskakkddf.eklikievndlqvqrkainelik 124
                 +  enlkd++a++  l  i+  ++ + l+ss + k+++ e l  i+ ++l++  +++ne i+
   MMETSP1325-20131115|617_1  20 QEQENLKDQEAVKVRLRNINLRMILRKLESSLRAKEQLaEGLHLIDFEQLKIENQTLNEKIE 81 
                 44589******************9999999987777662669999*************9886 PP

>> PF10505.4  NMDA receptor-regulated gene protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.7    0.0021       2.9     103     158 ..      17      74 ..       2      85 .. 0.76
   2 ?    6.6   0.7    0.0025       3.4     104     141 ..      75     112 ..      68     149 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0021
  PF10505.4 103 vlleekltlksleeklkdyynssllnllshlcefLkllsalpeGdyllrhsa..kdkf 158
                 + +e+ +lk+ e    +++n++l  +l++l   L+  ++l+eG +l+ ++    +++
  MMETSP1325-20131115|617_1  17 QMFQEQENLKDQEAVKVRLRNINLRMILRKLESSLRAKEQLAEGLHLIDFEQlkIENQ 74 
                344555578888888999******************************9876543344 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0025
  PF10505.4 104 lleekltlksleeklkdyynssllnllshlcefLklls 141
                 l+ek+++ + e +  + +n+s +++l+h+ e L+ +s
  MMETSP1325-20131115|617_1  75 TLNEKIEERNEELHKLRKKNTSNVQVLTHIKEKLQFVS 112
                5788998888777777889***********99998765 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   9.0    0.0036         5      99     182 ..      39     109 ..       9     115 .. 0.67
   2 ?   10.2   4.3   0.00026      0.36      70     150 ..     121     194 ..     110     202 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0036
  PF04156.9  99 qleerlaeleseledleedlellq.eelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqekla 182
                 l++ l +les l++ e+  e l+  ++++l+ ++++l+e+i+e ++e+++lr          ++ +s ++ l    ++++ekl+
  MMETSP1325-20131115|617_1  39 NLRMILRKLESSLRAKEQLAEGLHlIDFEQLKIENQTLNEKIEERNEELHKLR----------KKNTSNVQVL----THIKEKLQ 109
                355555666666655555444444566**************************..........6666666655....55555554 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00026
  PF04156.9  70 edekieesrlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr 150
                +++++++     els++++ l+++ +e e+l+ ++a+l+++    ++dl      ++s +++l s +e+i++l ++++ l 
  MMETSP1325-20131115|617_1 121 SLASLDA-----ELSKERDLLTKAKREREALRAENAALKQKQGFTNSDLLVVD--FESRKQELVSMREKIADLKQRYSLLA 194
                4445555.....88888888888888888888888888887777777777777..99999999999999999999998887 PP

>> PF14119.1  Domain of unknown function (DUF4288)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.38   5.1e+02      38      69 ..       7      38 ..       1      50 [. 0.69
   2 ?    9.5   0.2   0.00069      0.94      14      58 ..     120     163 ..      98     187 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.38
  PF14119.1 38 eAyekaeklakeeeekykN.edgeqvrwkleki 69
               +   +a++ +++ +e+ +N  d+e v+++l++i
  MMETSP1325-20131115|617_1  7 TGKPIAKRTVQMFQEQ-ENlKDQEAVKVRLRNI 38
               5555667766644444.5667899999999876 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00069
  PF14119.1  14 nkkkeddaklfeErlvLvkAkseeeAyekaeklakeeeekykNed 58 
                ++  + da+l +Er +L kAk e+eA++   + a ++++ ++N d
  MMETSP1325-20131115|617_1 120 SSLASLDAELSKERDLLTKAKREREALRAENA-ALKQKQGFTNSD 163
                55667799******************986555.889999999965 PP

>> PF05549.6  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.51     7e+02     110     136 ..      18      43 ..       9      74 .. 0.63
   2 ?    9.2   2.7   0.00044       0.6      42     140 ..      86     189 ..      74     198 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.51
  PF05549.6 110 tasdskllkklesietsleelhaklde 136
                  ++++ lk+ e+++ +l++++ ++  
  MMETSP1325-20131115|617_1  18 MFQEQENLKDQEAVKVRLRNINLRM-I 43 
                4455566666677777777666554.2 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00044
  PF05549.6  42 qLhaLhq.ns..LeWLthishdvdsii..nklnpvsllsqttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsss 140
                 Lh L + n+  +  Lthi++ ++ +   n +  +sl s  ++Ls+ rd l++ +++ + l++ +  l++++  +++  l+ ++es +++l ++ +k+ +l + 
  MMETSP1325-20131115|617_1  86 ELHKLRKkNTsnVQVLTHIKEKLQFVSaeNGVTRSSLASLDAELSKERDLLTKAKREREALRAENAALKQKQGFTNSDLLVVDFESRKQELVSMREKIADLKQR 189
                678776424433789*****99987651145667788899**********************99999999999888888999************9999888765 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   8.8    0.0018       2.5      21     136 ..      18     133 ..      12     163 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0018
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXX CS
  PF01496.14  21 afqrkfvnevrrldeverklrkleseikkakielkdekekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrelssldeefkalr 136
                  fq +   + +++ +v  +   l++ ++k++++l+ +++  +  +  ++e+l+ e ++l+e+++e +e l +L+k+  +  +    ++e+ +f+++++    ++l+sld e ++ r
   MMETSP1325-20131115|617_1  18 MFQEQENLKDQEAVKVRLRNINLRMILRKLESSLRAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKNTSNVQVLTHIKEKLQFVSAENGVTRSSLASLDAELSKER 133
                 45554444555555555555567888899999999999999999999*************************************************87333445556665555544 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       2.5   3.4e+03      76      76 ..      31      31 ..       9      59 .. 0.54
   2 ?    7.8  11.9    0.0017       2.3       6     128 ..      67     197 ..      64     201 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2.5
  PF07926.7 76 s 76
                
  MMETSP1325-20131115|617_1 31 V 31
               1 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0017
  PF07926.7   6 sslkeelkrlesqiaaieeqiqklkdDlenqaeiareaqdkYerelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmL........evelselekkieelneqNklLhsql 128
                ++lk e++ l+++i++ +e++ kl+++  +  + +++ ++k +    ++  t  +L +l +el++ ++ +++ + e+++ +ae+  l++k     s+L        ++el ++++ki +l++  +lL s +
  MMETSP1325-20131115|617_1  67 EQLKIENQTLNEKIEERNEELHKLRKKNTSNVQVLTHIKEKLQFVSAENGVTRSSLASLDAELSKERDLLTKAKREREALRAENAALKQKQGFTNSDLlvvdfesrKQELVSMREKIADLKQRYSLLASVV 197
                67999**************************************999**************************************88888877666666444444445677777777777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1684  (0.123171); expected 273.4 (0.02)
Passed bias filter:                      594  (0.0434465); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.86u 0.38s 00:00:01.24 Elapsed: 00:00:00.71
# Mc/sec: 685.16
//
Query:       MMETSP1325-20131115|618_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          2    7.9   4.8        2.2    7.8   3.3    1.1  1  PF12238.3 Merozoite surface antigen 2c


Domain annotation for each model (and alignments):
>> PF12238.3  Merozoite surface antigen 2c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   3.3   0.00016       2.2     140     197 ..      22      82 ..       3      91 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00016
  PF12238.3 140 aeeyskkasssqgtsetrPsegsatpntsaaktpanp...aaqpekpaetpkgnlksgsSF 197
                 ++ s+  sss+  ++++P + + ++  +a++  +++   +a p+++a ++++ ++s++SF
  MMETSP1325-20131115|618_1  22 VQSNSSVGSSSECRTDASPNASNPAGLPTASPMAEQEtasGAVPHEEAGSTRASSSSSASF 82 
                45566777888889999**999999888877776666677778999999888887778888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.72
# Mc/sec: 349.47
//
Query:       MMETSP1325-20131115|619_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   12.7   4.6      0.069   12.1   2.5    1.7  1  PF09544.5 Protein of unknown function (DUF2381)
        1.2    8.9   5.6        3.4    7.5   3.9    1.7  1  PF05680.7 ATP synthase E chain


Domain annotation for each model (and alignments):
>> PF09544.5  Protein of unknown function (DUF2381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.5     1e-05     0.069     114     167 ..     107     159 ..      96     177 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1e-05
  PF09544.5 114 aevdrqveVsrrertaeslqaeakearaelqqlreenerlraeeaspedlaLag 167
                +  ++ v ++r++r+++ lq++a++a+ae+++ r+e++ + + +++ +++aL++
  MMETSP1325-20131115|619_1 107 NPKENEVSIRREKREVADLQSAAEKAKAEAERKRKEKNTAFQMQEA-GAAALSA 159
                446889****************************998776555544.3444444 PP

>> PF05680.7  ATP synthase E chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.9   0.00049       3.4      38      76 ..     115     153 ..     109     166 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00049
  PF05680.7  38 keekereyeaqekliekakaayakkkqakseakslaegs 76 
                 + ++re++  ++  ekaka+ + k+++k+ a ++ e+ 
  MMETSP1325-20131115|619_1 115 IRREKREVADLQSAAEKAKAEAERKRKEKNTAFQMQEAG 153
                57899************************9988887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       971  (0.0710211); expected 273.4 (0.02)
Passed bias filter:                      561  (0.0410328); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.39s 00:00:01.00 Elapsed: 00:00:00.77
# Mc/sec: 740.69
//
Query:       MMETSP1325-20131115|621_1  [L=352]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-49  166.7   0.3    6.3e-49  166.4   0.2    1.1  1  PF01915.17 Glycosyl hydrolase family 3 C-terminal domain
    1.6e-14   53.4   0.0    2.9e-14   52.6   0.0    1.4  1  PF14310.1  Fibronectin type III-like domain


Domain annotation for each model (and alignments):
>> PF01915.17  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.4   0.2   9.3e-53   6.3e-49      19     227 .]       5     216 ..       1     216 [. 0.87

  Alignments for each domain:
  == domain 1    score: 166.4 bits;  conditional E-value: 9.3e-53
                 EEEEEESSHH................HHHHHHHHHHHHHHTTSS---EEEEEET----HHHHHHHHH-SEEEE---......-S--B---.B-SS--SGGGHHHHHHHHHHHHHT--EEEEE-SSGGGGGGGT...T-SEEEE------STTT---TTT----------SS-EE-SS.................................----EEE-------S-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01915.17  19 kiaviGpnadgtvksgggsgavnpsylvtplegirarlskakvvveekgseveddeeiaeavaaakkaDvavvvvgewegegekeeesee.gdrtdlalpenqdeLieavaaankpvvvvlhsggpvdmepwae..kvkAilaawypGqegGnAiadvLfGdvnPsGkLPvtfpksl.......edlpayynek........ekkrtyrydsedplypfgeGlsvgy 227
                 k+av+G nad+t ++ g     +++ylv+pl+g+++  ++ ++       ++ d ++ ++av+ ak aDvav+vvg   +e+ + +++ e +dr++l lpenqd+Li+av++a  +vv+v++ ggpvd+++w++  kv+Ai++++ypGq+gG+A+ad +fG +nP+GkL++t++ ++       +d+      +         ++r yr+++++p ++fg G+s+++
   MMETSP1325-20131115|621_1   5 KLAVMGRNADATNNMQGNYF-GDAPYLVSPLQGLTDFDASVET-------SYCDGSNTNQAVRLAKAADVAVLVVG-LTSEAVSPSDEAEgKDRESLILPENQDALIQAVSDAVDKVVLVVMGGGPVDIAQWRDspKVQAIMWCGYPGQDGGTALADAIFGVTNPGGKLTQTWYPEEftqqaalDDY------RmrpnvtegYPGRSYRFYTGNPVFAFGDGMSYTT 216
                 89********9888877553.3799**********99555544.......356999********************.666666434555559***********************************************************************************998655555444......344555699***********************96 PP

>> PF14310.1  Fibronectin type III-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   4.3e-18   2.9e-14       1      69 [.     272     340 ..     272     342 .. 0.94

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 4.3e-18
  PF14310.1   1 evvQlYvsdpegsv.erpvkqLkgFekveLapGesetvtitldrkdlsvwdeeaqnwvveaGeytvlvgd 69 
                ev+ lYv+ p++++ + p k L++Fek +La+Ges +  ++l++++ls+++++ +++++  G+++v+ g+
  MMETSP1325-20131115|621_1 272 EVALLYVASPNAGAdGAPLKSLAAFEKFHLAAGESGEAVFQLTAEHLSFVNVH-GERRAVRGTWRVWAGN 340
                89*********99857999**********************************.578***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.37s 00:00:01.00 Elapsed: 00:00:00.84
# Mc/sec: 1004.19
//
Query:       MMETSP1325-20131115|625_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.057   13.1   6.7       0.88    9.3   4.6    2.3  1  PF01485.16 IBR domain
      0.059   13.0   1.8      0.059   13.0   1.3    1.9  2  PF02008.15 CXXC zinc finger domain
       0.11   12.2   0.6       0.15   11.8   0.4    1.1  1  PF04161.8  Arv1-like family
        1.3    9.1   6.4        3.5    7.7   0.8    2.9  3  PF03107.11 C1 domain


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   4.6   0.00026      0.88      19      56 ..      10      81 ..       3      92 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00026
  PF01485.16 19 k.wCprpdCeaiiekekgakks...............................svtCskCg..fefCflCkk 56
                +  Cp+++C   + +++                                      +C++C+   + C+ C++
   MMETSP1325-20131115|625_1 10 TsRCPYKNCTGTVSVNGESRDLgpltfrfvngmsytcerpdslfvienkkkrpVGKCETCErkVSQCIGCGE 81
                349**************99999*******************************8899988822456999986 PP

>> PF02008.15  CXXC zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.83   2.8e+03      26      27 ..      17      18 ..       8      29 .. 0.60
   2 ?   13.0   1.3   1.7e-05     0.059       3      31 ..      57      83 ..      55      93 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.83
                CC CS
  PF02008.15 26 aC 27
                +C
   MMETSP1325-20131115|625_1 17 NC 18
                23 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.7e-05
                ----B-----HHHHS--.----CCCCTST CS
  PF02008.15  3 lkkrkrCgeCeaCqrtedCgkCsaCrdkk 31
                 kk+++ g+Ce C+r+    +C  C + +
   MMETSP1325-20131115|625_1 57 NKKKRPVGKCETCERKV--SQCIGCGEIM 83
                5788899**********..9999997654 PP

>> PF04161.8  Arv1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   4.3e-05      0.15       5      49 ..      45      88 ..      44      94 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.3e-05
  PF04161.8  5 eCgrkvesLYtkyssdnikltkCkkCkkvaDkYiEydnvilfidl 49
               +C+r+ +sL+++ ++++  + kC++C++ + + i + ++++++d+
  MMETSP1325-20131115|625_1 45 TCERP-DSLFVIENKKKRPVGKCETCERKVSQCIGCGEIMMINDI 88
               59999.*********************************999997 PP

>> PF03107.11  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.026        90      10      23 ..      39      53 ..      37      55 .. 0.67
   2 ?    7.7   0.8     0.001       3.5       2      11 ..      65      74 ..      64      75 .. 0.88
   3 ?   -1.4   0.1      0.68   2.3e+03       2       8 ..      75      81 ..      74      83 .. 0.69

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.026
  PF03107.11 10 tdgfyfYtCkkcc..f 23
                ++g   YtC++ +  f
   MMETSP1325-20131115|625_1 39 VNGM-SYTCERPDslF 53
                6777.8***8755565 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.001
  PF03107.11  2 kCsvCerktd 11
                kC+ Cerk++
   MMETSP1325-20131115|625_1 65 KCETCERKVS 74
                8******986 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.68
  PF03107.11  2 kCsvCer 8 
                 C  C++
   MMETSP1325-20131115|625_1 75 QCIGCGE 81
                6888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       554  (0.0405208); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.73
# Mc/sec: 324.99
//
Query:       MMETSP1325-20131115|620_1  [L=922]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-12   47.6   0.0    2.4e-12   46.5   0.0    1.5  1  PF00583.19 Acetyltransferase (GNAT) family
    8.3e-11   41.7   0.0    1.6e-10   40.8   0.0    1.5  1  PF13508.1  Acetyltransferase (GNAT) domain
    1.4e-08   34.7   0.1    3.6e-08   33.4   0.1    1.7  1  PF13673.1  Acetyltransferase (GNAT) domain
    2.8e-05   23.8   0.0    5.6e-05   22.9   0.0    1.5  1  PF13527.1  Acetyltransferase (GNAT) domain
     0.0057   16.2   0.0      0.014   15.0   0.0    1.6  1  PF08445.5  FR47-like protein


Domain annotation for each model (and alignments):
>> PF00583.19  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   0.0   8.9e-16   2.4e-12       6      82 ..     421     492 ..     415     493 .. 0.88

  Alignments for each domain:
  == domain 1    score: 46.5 bits;  conditional E-value: 8.9e-16
                 EBEEEEEEEEECTTSCSTTEEEEEEEEESGGGTTTT-HHHHHHHHHHHHHHTTHSEEEEEEETTCHHHHHHHHHTT- CS
  PF00583.19   6 elvGfaslsvigedgraertayieglaVspeyrgqGiGkaLleallekarerglerielevesgndraiklYeklGF 82 
                 ++vG+++l+   e ++ +r a++ +++V+p++r+qGiG+  + +++e+ar+rg+ +++l + ++++    +Ye++GF
   MMETSP1325-20131115|620_1 421 VVVGHCMLRQACEVAD-GRSAILLSVVVDPSCRRQGIGRFIVAQAEEEARRRGFAFLYLSTPDQQR----FYERCGF 492
                 5778888888777644.699****************************************977666....******* PP

>> PF13508.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   5.8e-14   1.6e-10      13      78 ..     421     493 ..     405     494 .. 0.84

  Alignments for each domain:
  == domain 1    score: 40.8 bits;  conditional E-value: 5.8e-14
  PF13508.1  13 eivGflvl.....redgetayiggvavdpeyrgkGlGskllnklkeeygekpi.vlla.rparkkFYeklGFk 78 
                 +vG++ l     + dg +a++ +v+vdp+ r++G+G+ ++++++ee++ ++  +l+   p+ ++FYe++GF 
  MMETSP1325-20131115|620_1 421 VVVGHCMLrqaceVADGRSAILLSVVVDPSCRRQGIGRFIVAQAEEEARRRGFaFLYLsTPDQQRFYERCGFS 493
                47899999888887788899****************************9888435654379***********7 PP

>> PF13673.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.1   1.3e-11   3.6e-08      45     117 .]     411     492 ..     399     492 .. 0.79

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 1.3e-11
  PF13673.1  45 tivvaerggev.vGfaglkpdas........lsllyvrpeargrGigraLldaieaeark.gikvltteasklarplyerlGf 117
                +++++++g+ v vG ++l +  +        l  + v p++r++Gigr +++++e+ear+ g++ l++ ++++ +++yer+Gf
  MMETSP1325-20131115|620_1 411 CASALRDGQAVvVGHCMLRQACEvadgrsaiLLSVVVDPSCRRQGIGRFIVAQAEEEARRrGFAFLYL-STPDQQRFYERCGF 492
                55566666655369999876555333345656669***********************777*******.9999*********9 PP

>> PF13527.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0     2e-08   5.6e-05      59     126 ..     427     493 ..     403     495 .. 0.80

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 2e-08
  PF13527.1  59 llpfelnvpGkelpaagvtgVatapehrgrgllrkLlarlleemrergqplsilfP.ssypiYrrfGye 126
                +l++  +v++   + a + +V ++p  r++g+ r ++a++ ee+r rg  + +l    + ++Y+r+G++
  MMETSP1325-20131115|620_1 427 MLRQACEVADG--RSAILLSVVVDPSCRRQGIGRFIVAQAEEEARRRGFAFLYLSTpDQQRFYERCGFS 493
                34555666555..478999********************************99964499*********7 PP

>> PF08445.5  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0     5e-06     0.014      21      81 ..     439     496 ..     427     501 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5e-06
                T------EE-GGG--------HHHHHHHHHH---S-EEEEEETT-HHHHHHHHH---B--- CS
  PF08445.5  21 ggelgalqvlpehrrrGlgsrlvkalakeiaergktvllvvvasNtpsirlyeklGfekie 81 
                + +l ++ v+p+ rr+G g+ +v++  +e ++rg    l+  + ++  +r+ye+ Gf + e
  MMETSP1325-20131115|620_1 439 SAILLSVVVDPSCRRQGIGRFIVAQAEEEARRRGFAF-LYLSTPDQ--QRFYERCGFSVTE 496
                478999*******************999999999654.44444444..69*******9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (922 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.23u 0.38s 00:00:01.61 Elapsed: 00:00:00.99
# Mc/sec: 2231.76
//
Query:       MMETSP1325-20131115|626_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.69
# Mc/sec: 291.73
//
Query:       MMETSP1325-20131115|627_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   20.5   0.0    0.00061   19.3   0.0    1.6  1  PF13405.1  EF-hand domain
    0.00058   18.8   0.0     0.0013   17.8   0.0    1.6  1  PF00036.27 EF hand
    0.00092   18.7   2.7      0.013   15.0   0.1    2.4  2  PF12221.3  Bacterial membrane protein N terminal
     0.0064   16.5   0.0     0.0097   15.9   0.0    1.3  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
       0.14   12.5   2.5          1    9.6   0.3    2.1  2  PF11716.3  Mycothiol maleylpyruvate isomerase N-terminal domain


Domain annotation for each model (and alignments):
>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.2e-07   0.00061       2      27 ..      69      94 ..      68     101 .. 0.91

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 2.2e-07
               HH---GCC-------B---HHHHHHH CS
  PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
               l+ aF+++D+ gdG+++  +L +aLr
  MMETSP1325-20131115|627_1 69 LMNAFDKYDRPGDGTLSPPDLDQALR 94
               6789*********************9 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.6e-07    0.0013       2      28 ..      69      95 ..      68      96 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 4.6e-07
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                l++aF+++D+ gdG++s  ++ +al+ 
   MMETSP1325-20131115|627_1 69 LMNAFDKYDRPGDGTLSPPDLDQALRG 95
                789*****************9999875 PP

>> PF12221.3  Bacterial membrane protein N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.018        49       5      22 ..      20      39 ..      17      52 .. 0.81
   2 !   15.0   0.1   4.9e-06     0.013      18      35 ..      81     101 ..      62     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.018
  PF12221.3  5 epgngdqdPW..grnqg.PPD 22
               e+g+ +++ W  g ++g +PD
  MMETSP1325-20131115|627_1 20 ESGG-NKQAWeeGVDDGeDPD 39
               4555.6****97667777898 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 4.9e-06
  PF12221.3  18 qg...PPDLDEllrklqrkLg 35 
                +g   PPDLD++lr l  +L+
  MMETSP1325-20131115|627_1  81 DGtlsPPDLDQALRGLELRLS 101
                34566*********9999987 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   3.5e-06    0.0097       2      39 ..      69     106 ..      63     142 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 3.5e-06
  PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevr 39 
                l+ aF+++D+ gdg+l++ +L ++l++l   ls++ ++
  MMETSP1325-20131115|627_1  69 LMNAFDKYDRPGDGTLSPPDLDQALRGLELRLSRQTLE 106
                6779**********************998666644443 PP

>> PF11716.3  Mycothiol maleylpyruvate isomerase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.3   0.00037         1      71     112 ..      29      69 ..       4      81 .. 0.72
   2 ?    3.2   0.1     0.035        95      84     131 ..      88     131 ..      67     134 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00037
                HHHHH----S-HHHHHHHHHHHHHHHHHHHHT--TCGGG-EE CS
  PF11716.3  71 aeavdlaaslapeallaafraavtrlaaalaalppdaradtl 112
                +e vd   +++++ ++++f +++ r+a +la+++++ r + l
  MMETSP1325-20131115|627_1  29 EEGVDD-GEDPDDVVVQWFVRSIGRVANRLARVTDQSRYRVL 69 
                444444.4688999********************99886665 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.035
                HHHHHHHHHHHHHHHHHHT--TCGGG-EEE-----EEETTHHHHHHHH CS
  PF11716.3  84 allaafraavtrlaaalaalppdaradtlgiplgprslgeflrtrlvE 131
                +    +++a ++l  +l + + +a+ +++ ++ +  +  ++   +lv+
  MMETSP1325-20131115|627_1  88 D----LDQALRGLELRLSRQTLEAISWRFRWQSRNHRTIRVDYNQLVD 131
                4....5566666677777777789999997777777656666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.62
# Mc/sec: 657.07
//
Query:       MMETSP1325-20131115|629_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.63
# Mc/sec: 532.52
//
Query:       MMETSP1325-20131115|631_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   14.7   0.1      0.052   13.9   0.0    1.3  1  PF02338.14 OTU-like cysteine protease


Domain annotation for each model (and alignments):
>> PF02338.14  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.8e-06     0.052      22      97 ..      82     152 ..      70     171 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.8e-06
                 HHHHHHHHHSS--HHHH-------------............-HHHHHHHHHHHHHHTS-EEE---.---------- CS
  PF02338.14  22 rkekheelrealveylrehrelfeefleeeeeeYlkeiskdgewgeeieifalahilrrpiivlks.sggealvyik 97 
                 r+ek ++lr+ +   lr+ +e++    + +     k +s+d  +++e++ ++la+ l+r i ++++ ++ + l++  
   MMETSP1325-20131115|631_1  82 REEKSNDLRKCV-ATLRKAQEQIATVEQPD-----KTLSSDLWMNTELHCKVLANALNRSILLYDQaWRKDRLGNSY 152
                 566777787766.55555555566666666.....679999999*******************99855555444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       679  (0.0496635); expected 273.4 (0.02)
Passed bias filter:                      542  (0.0396431); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.43s 00:00:01.01 Elapsed: 00:00:00.67
# Mc/sec: 944.24
//
Query:       MMETSP1325-20131115|633_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-13   48.6   9.9     0.0037   16.9   0.1    5.1  5  PF07719.12 Tetratricopeptide repeat
      6e-12   44.9   9.3    8.2e-06   25.2   0.5    3.6  4  PF13414.1  TPR repeat
    1.6e-11   43.1   6.2      0.032   13.7   0.0    5.0  5  PF00515.23 Tetratricopeptide repeat
    8.8e-09   35.1   9.3      0.012   16.0   0.2    4.3  4  PF13428.1  Tetratricopeptide repeat
    1.4e-08   33.7   0.1        0.8    9.5   0.0    4.9  5  PF13181.1  Tetratricopeptide repeat
    2.7e-06   27.0   6.5    0.00054   19.7   0.5    3.4  3  PF13424.1  Tetratricopeptide repeat
    0.00018   20.9   5.8          6    6.8   0.0    4.3  4  PF13176.1  Tetratricopeptide repeat
    0.00042   20.7  13.2      0.011   16.2   1.3    3.3  3  PF13432.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.4   2.4      0.047   13.7   0.3    2.5  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      0.016   15.4   5.8        4.4    7.8   0.1    4.1  4  PF13174.1  Tetratricopeptide repeat
      0.019   15.0   0.8         18    5.7   0.0    4.1  4  PF13431.1  Tetratricopeptide repeat
      0.077   12.7   9.9        1.5    8.6   1.3    3.8  3  PF04212.13 MIT (microtubule interacting and transport) domain
      0.083   12.5   2.3        2.4    7.8   0.0    3.0  3  PF04761.7  Lactococcus bacteriophage putative transcription regulator


Domain annotation for each model (and alignments):
>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.2   2.3e+03      20      32 ..       2      14 ..       1      16 [. 0.80
   2 !   16.9   0.1   3.5e-06    0.0037       3      34 .]      19      50 ..      18      50 .. 0.94
   3 !   10.3   0.1   0.00045      0.47      13      31 ..      75      93 ..      70      96 .. 0.90
   4 !   14.9   0.0   1.5e-05     0.016       6      33 ..     106     133 ..     102     134 .. 0.89
   5 !    9.2   0.1    0.0011       1.1       5      29 ..     141     165 ..     138     170 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 2.2
                HHHHHHHHHHH-T CS
  PF07719.12 20 AleafekAleldP 32
                A+++  +A++l+ 
   MMETSP1325-20131115|633_1  2 AVADAGRAIKLES 14
                8888999**9975 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 3.5e-06
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldPnn 34
                al ++G+ yy l ++e A +++++Al+ dP++
   MMETSP1325-20131115|633_1 19 ALELRGEGYYFLAEHEMAMNHWRQALKFDPEH 50
                6789**************************86 PP

  == domain 3    score: 10.3 bits;  conditional E-value: 0.00045
                HTT-HHHHHHHHHHHHHH- CS
  PF07719.12 13 klgdyeeAleafekAleld 31
                ++g+++eA+e +++A++ d
   MMETSP1325-20131115|633_1 75 EQGQHAEAIETWREAIAVD 93
                69**************976 PP

  == domain 4    score: 14.9 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAleldPn 33 
                 ++ +a++k+++++ A++a ++Al +d +
   MMETSP1325-20131115|633_1 106 LISKAHLKMNEWQNAKDAAQEALNIDHT 133
                 6789********************9976 PP

  == domain 5    score: 9.2 bits;  conditional E-value: 0.0011
                 HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAle 29 
                  ++G+a++ + +y++ +++++ A+ 
   MMETSP1325-20131115|633_1 141 LCMGEAHLGAEEYDQSVHWYKAAVD 165
                 579********************86 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.4   2.5e+03      57      68 ..       2      13 ..       1      14 [. 0.79
   2 !   16.5   0.0     4e-06    0.0042       4      37 ..      18      51 ..      15      57 .. 0.90
   3 !   25.2   0.5   7.8e-09   8.2e-06      15      68 ..      75     131 ..      65     132 .. 0.91
   4 !    7.0   0.1    0.0038         4       9      39 ..     143     173 ..     138     181 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 2.4
  PF13414.1 57 AledyekAleld 68
               A++d+ +A++l 
  MMETSP1325-20131115|633_1  2 AVADAGRAIKLE 13
               888999999885 PP

  == domain 2    score: 16.5 bits;  conditional E-value: 4e-06
  PF13414.1  4 ealkelGnalfkegdydeAieayekAleldpnna 37
                al  +G+ ++ + +++ A  ++++Al+ dp++ 
  MMETSP1325-20131115|633_1 18 VALELRGEGYYFLAEHEMAMNHWRQALKFDPEHK 51
               578899*************************996 PP

  == domain 3    score: 25.2 bits;  conditional E-value: 7.8e-09
  PF13414.1  15 kegdydeAieayekAleldpnnae....lyynlAlaylklgkdyeeAledyekAleld 68 
                ++g+++eAie +++A++ d  +       +  +++a+lk+++ ++ A +++++Al++d
  MMETSP1325-20131115|633_1  75 EQGQHAEAIETWREAIAVDAAHFAfigpTLVLISKAHLKMNE-WQNAKDAAQEALNID 131
                69*****************999666788************95.79***********98 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.0038
  PF13414.1   9 lGnalfkegdydeAieayekAleldpnnael 39 
                +G+a++ + +yd+++  y+ A++ + ++a +
  MMETSP1325-20131115|633_1 143 MGEAHLGAEEYDQSVHWYKAAVDAQGEDARA 173
                6999******************999888865 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.87   9.1e+02      20      33 ..       2      15 ..       1      16 [. 0.82
   2 !   13.7   0.0   3.1e-05     0.032       6      34 .]      22      50 ..      17      50 .. 0.89
   3 !   10.2   0.0   0.00037      0.39      13      31 ..      75      93 ..      74      95 .. 0.93
   4 !   11.5   0.1   0.00015      0.16      10      34 .]     110     134 ..     109     134 .. 0.93
   5 !    6.8   0.1    0.0045       4.7       4      28 ..     140     164 ..     138     169 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.87
                HHHHHHHHHHHHTT CS
  PF00515.23 20 AleyyekALelnPn 33
                A+++  +A++l+ +
   MMETSP1325-20131115|633_1  2 AVADAGRAIKLESD 15
                888889****9876 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 3.1e-05
                HHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  6 nlGnaylklgkydeAleyyekALelnPnn 34
                 +G  y+ l +++ A  + ++AL+ +P++
   MMETSP1325-20131115|633_1 22 LRGEGYYFLAEHEMAMNHWRQALKFDPEH 50
                688889999******************86 PP

  == domain 3    score: 10.2 bits;  conditional E-value: 0.00037
                HTT-HHHHHHHHHHHHHHH CS
  PF00515.23 13 klgkydeAleyyekALeln 31
                ++g++ eA+e  ++A+ ++
   MMETSP1325-20131115|633_1 75 EQGQHAEAIETWREAIAVD 93
                69**************987 PP

  == domain 4    score: 11.5 bits;  conditional E-value: 0.00015
                 HHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  10 aylklgkydeAleyyekALelnPnn 34 
                 a+lk+++++ A ++ ++AL +++++
   MMETSP1325-20131115|633_1 110 AHLKMNEWQNAKDAAQEALNIDHTD 134
                 799******************9875 PP

  == domain 5    score: 6.8 bits;  conditional E-value: 0.0045
                 HHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23   4 lynlGnaylklgkydeAleyyekAL 28 
                    +G a+l  ++yd+ +  y+ A+
   MMETSP1325-20131115|633_1 140 RLCMGEAHLGAEEYDQSVHWYKAAV 164
                 5679******************997 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0     0.004       4.2       4      37 ..      20      53 ..      17      60 .. 0.80
   2 !    8.5   0.2    0.0029       3.1      13      31 ..      75      93 ..      64      99 .. 0.84
   3 !    8.3   0.1    0.0036       3.8       6      42 ..     106     144 ..     102     145 .. 0.75
   4 !   16.0   0.2   1.2e-05     0.012       2      40 ..     138     176 ..     137     180 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.004
  PF13428.1  4 llalarallalGdpdeAiallrralalaPddaea 37
               l ++++ +  l +++ A+++ r+al+ +P++  +
  MMETSP1325-20131115|633_1 20 LELRGEGYYFLAEHEMAMNHWRQALKFDPEHKSV 53
               5567888888999999999999999999997655 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0029
  PF13428.1 13 alGdpdeAiallrralala 31
               ++G+++eAi+  r+a+a +
  MMETSP1325-20131115|633_1 75 EQGQHAEAIETWREAIAVD 93
               79*************9965 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0036
  PF13428.1   6 alarallalGdpdeAiallrralala.Pdda.ealllLa 42 
                +   a+l +++++ A +++++al  +  d+a +a+l ++
  MMETSP1325-20131115|633_1 106 LISKAHLKMNEWQNAKDAAQEALNIDhTDSAqDARLCMG 144
                55789*****************98541444436777665 PP

  == domain 4    score: 16.0 bits;  conditional E-value: 1.2e-05
  PF13428.1   2 eallalarallalGdpdeAiallrralalaPddaealll 40 
                +a+l +++a+l ++++d+ + ++++a+ ++ +da+a   
  MMETSP1325-20131115|633_1 138 DARLCMGEAHLGAEEYDQSVHWYKAAVDAQGEDARAKEG 176
                6899******************************99765 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00096         1       6      32 ..      22      48 ..      18      50 .. 0.86
   2 ?   -1.3   0.0       2.1   2.2e+03      11      21 ..      57      71 ..      57      76 .. 0.56
   3 ?    4.7   0.0     0.026        27      13      31 ..      75      93 ..      73      96 .. 0.86
   4 !    9.5   0.0   0.00076       0.8       3      31 ..     103     131 ..     101     134 .. 0.91
   5 ?    3.9   0.0     0.044        47       4      30 ..     140     166 ..     137     170 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00096
               T---HHHHTT-HHHHHHHHH---HHHH CS
  PF13181.1  6 nlGdiYrqlGdydkAkeylekalelkp 32
               ++G+ Y  l +++ A+++ ++al+ +p
  MMETSP1325-20131115|633_1 22 LRGEGYYFLAEHEMAMNHWRQALKFDP 48
               6666699999***************99 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 2.1
               HHHTT-H....HHHH CS
  PF13181.1 11 YrqlGdy....dkAk 21
               Yrql+++    d+A 
  MMETSP1325-20131115|633_1 57 YRQLKKImkraDNAA 71
               666666543336665 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.026
               HTT-HHHHHHHHH---HHH CS
  PF13181.1 13 qlGdydkAkeylekalelk 31
               + G++ +A+e  ++a+  +
  MMETSP1325-20131115|633_1 75 EQGQHAEAIETWREAIAVD 93
               579************9765 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.00076
                -TTT---HHHHTT-HHHHHHHHH---HHH CS
  PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelk 31 
                ++ ++++++++++++ +Ak + ++al ++
  MMETSP1325-20131115|633_1 103 TLVLISKAHLKMNEWQNAKDAAQEALNID 131
                6889**********************887 PP

  == domain 5    score: 3.9 bits;  conditional E-value: 0.044
                TTT---HHHHTT-HHHHHHHHH---HH CS
  PF13181.1   4 yynlGdiYrqlGdydkAkeylekalel 30 
                ++ +G++++   +yd++   ++ a++ 
  MMETSP1325-20131115|633_1 140 RLCMGEAHLGAEEYDQSVHWYKAAVDA 166
                566899999999************985 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1      0.09        94      11      34 ..      23      46 ..      14      67 .. 0.73
   2 !   19.7   0.5   5.1e-07   0.00054      10      76 ..      69     131 ..      62     133 .. 0.90
   3 !   17.2   0.4   3.1e-06    0.0032       7      75 ..     103     166 ..      99     169 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.09
  PF13424.1 11 lalvlrrlgdydeAlelyekalel 34
                ++ ++ l +++ A ++ ++al+ 
  MMETSP1325-20131115|633_1 23 RGEGYYFLAEHEMAMNHWRQALKF 46
               455566677777777777777754 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 5.1e-07
  PF13424.1  10 nlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                n a++  ++g++ eA+e  ++a+++ ++++    + +  +l  ++ ++l++++ + A++  ++Al+i+
  MMETSP1325-20131115|633_1  69 NAAQS-SEQGQHAEAIETWREAIAVdAAHF----AFIGPTLVLISKAHLKMNEWQNAKDAAQEALNID 131
                56666.68*****************88777....67899**************************997 PP

  == domain 3    score: 17.2 bits;  conditional E-value: 3.1e-06
  PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdta.ralnnlanlylalgdydeAleylekAlei 75 
                +l  +  +++++ +++ A +  ++al++      dh d a +a + +++++l +++yd+++ +++ A+++
  MMETSP1325-20131115|633_1 103 TLVLISKAHLKMNEWQNAKDAAQEALNI------DHTDSAqDARLCMGEAHLGAEEYDQSVHWYKAAVDA 166
                5667889999******************......4444454999***********************986 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.14   1.5e+02      13      34 ..      31      50 ..      24      52 .. 0.69
   2 !    6.7   0.1    0.0059       6.2      10      31 ..      74      93 ..      69      96 .. 0.81
   3 !    6.8   0.0    0.0057         6       1      29 [.     103     131 ..     103     138 .. 0.83
   4 ?    5.0   0.1     0.022        23       5      32 ..     143     168 ..     143     172 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.14
  PF13176.1 13 gdyekAielyeraLaltkdpld 34
                ++e A ++ ++  al+ dp++
  MMETSP1325-20131115|633_1 31 AEHEMAMNHWRQ--ALKFDPEH 50
               467778888888..66666665 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0059
  PF13176.1 10 srlgdyekAielyeraLaltkd 31
               s++g++ +Aie  ++  a++ d
  MMETSP1325-20131115|633_1 74 SEQGQHAEAIETWRE--AIAVD 93
               569************..66555 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0057
  PF13176.1   1 allnLarlysrlgdyekAielyeraLalt 29 
                +l+ + +++ +++++++A ++ ++aL ++
  MMETSP1325-20131115|633_1 103 TLVLISKAHLKMNEWQNAKDAAQEALNID 131
                6788899***********99999977665 PP

  == domain 4    score: 5.0 bits;  conditional E-value: 0.022
  PF13176.1   5 LarlysrlgdyekAielyeraLaltkdp 32 
                +++++    +y++ +  y++  a++   
  MMETSP1325-20131115|633_1 143 MGEAHLGAEEYDQSVHWYKA--AVDAQG 168
                7999999*************..887555 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.077        81      19      52 ..       5      45 ..       1      47 [. 0.70
   2 !    7.7   0.3    0.0048       5.1       3      27 ..      69      93 ..      67     100 .. 0.75
   3 !   16.2   1.3   1.1e-05     0.011       5      61 ..     109     167 ..     107     174 .. 0.92

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.077
  PF13432.1 19 aleaalala.......PeaaeallllaeallrlgrldeAaa 52
                  +a++l+        +  e +++lae  ++++++ +A++
  MMETSP1325-20131115|633_1  5 DAGRAIKLEsdsivalELRGEGYYFLAEHEMAMNHWRQALK 45
               5555556664444444458899**************99986 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0048
  PF13432.1  3 lArallraGdydeAlaaleaalala 27
               +A    ++G+ +eA++ +++a+a +
  MMETSP1325-20131115|633_1 69 NAAQSSEQGQHAEAIETWREAIAVD 93
               6777778999999999999998877 PP

  == domain 3    score: 16.2 bits;  conditional E-value: 1.1e-05
  PF13432.1   5 rallraGdydeAlaaleaalala..PeaaeallllaeallrlgrldeAaallraalala 61 
                +a l+ ++++ A +a ++al  +    a +a+l  +ea+l + ++d+++ +++aa+++ 
  MMETSP1325-20131115|633_1 109 KAHLKMNEWQNAKDAAQEALNIDhtDSAQDARLCMGEAHLGAEEYDQSVHWYKAAVDAQ 167
                5789999******************99****************************9765 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.19     2e+02      35      62 ..      27      57 ..       2      92 .. 0.51
   2 ?   13.7   0.3   4.5e-05     0.047       1      79 [.      75     158 ..      74     163 .. 0.76
   3 ?    7.3   0.2    0.0042       4.5       2      50 ..     114     162 ..     113     182 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.19
               HHH---HHHHHHHHHC.TSHCHCB..HHHHH CS
  PF12895.2 35 lylngeykrAyellrk.leldsss..lgcry 62
               +y ++e++ A++  r+ l++d+++  ++++y
  MMETSP1325-20131115|633_1 27 YYFLAEHEMAMNHWRQaLKFDPEHksVKTKY 57
               4444444444444444444444442233333 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 4.5e-05
                HTT-HHHHHHHHHHHCCC-ST-HHHH....CHHHHHHHHHH---HHHHHHHHHC.TSHCH.CBHHHHHHH.HHHHHHTT-HHHHCC CS
  PF12895.2   1 eqhnyknAlflaekllaespkdpeda....ylyalAlclylngeykrAyellrk.lelds.sslgcryll.ArcllklgkydeAia 79 
                eq+++ +A+   ++++a +    + a     l+++ +++++++e++ A ++ ++ l++d   s++ + l+ +++ l  ++yd+   
  MMETSP1325-20131115|633_1  75 EQGQHAEAIETWREAIAVDAA--HFAfigpTLVLISKAHLKMNEWQNAKDAAQEaLNIDHtDSAQDARLCmGEAHLGAEEYDQSVH 158
                588999999999999999874..333455567777***************998896666633355555555**********99765 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.0042
                TT-HHHHHHHHHHHCCC-ST-H.HHHCHHHHHHHHHH---HHHHHHHHHC CS
  PF12895.2   2 qhnyknAlflaekllaespkdp.edaylyalAlclylngeykrAyellrk 50 
                +++++nA   a+++l  +++d+ +da  + ++++++ ++ey++ +++++ 
  MMETSP1325-20131115|633_1 114 MNEWQNAKDAAQEALNIDHTDSaQDA-RLCMGEAHLGAEEYDQSVHWYKA 162
                57788999999999999998775444.4448************9999943 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0         2   2.1e+03      15      28 ..      32      45 ..      19      50 .. 0.56
   2 ?    7.8   0.1    0.0042       4.4       6      27 ..      70      90 ..      57      92 .. 0.87
   3 ?    6.7   0.0    0.0098        10       5      28 ..     106     129 ..     103     131 .. 0.86
   4 ?    0.5   0.1      0.93   9.8e+02       6      28 ..     143     165 ..     138     180 .. 0.65

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 2
               HHHHHHHHHHHHHH CS
  PF13174.1 15 dtdeAlealerlik 28
               +++ A+  +++ +k
  MMETSP1325-20131115|633_1 32 EHEMAMNHWRQALK 45
               45555555555444 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0042
               HHHHHHHHHHHHHHHHHHHHHH CS
  PF13174.1  6 lalsyyklgdtdeAlealerli 27
               +a+s +++ +++eA+e++++ i
  MMETSP1325-20131115|633_1 70 AAQSSEQG-QHAEAIETWREAI 90
               67777766.*********9988 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.0098
                HHHHHHHHHHHHHHHHHHHHHHHH CS
  PF13174.1   5 klalsyyklgdtdeAlealerlik 28 
                ++ ++++k++++++A++a ++ ++
  MMETSP1325-20131115|633_1 106 LISKAHLKMNEWQNAKDAAQEALN 129
                5678999*99**********9886 PP

  == domain 4    score: 0.5 bits;  conditional E-value: 0.93
                HHHHHHHHHHHHHHHHHHHHHHH CS
  PF13174.1   6 lalsyyklgdtdeAlealerlik 28 
                ++++++ + ++d+++  ++  ++
  MMETSP1325-20131115|633_1 143 MGEAHLGAEEYDQSVHWYKAAVD 165
                56666664467777666665554 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.075        79       4      32 ..       8      36 ..       7      38 .. 0.91
   2 ?   -0.3   0.0       1.4   1.5e+03       3      12 ..      41      50 ..      39      53 .. 0.84
   3 ?   -0.7   0.1       1.9     2e+03      24      34 .]      74      84 ..      69      84 .. 0.79
   4 ?    5.7   0.0     0.017        18       3      32 ..     125     156 ..     123     174 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.075
  PF13431.1  4 kaleldPnnadaynnLAelllnnGdleeA 32
               +a++l+ ++ +a+  ++e ++ + ++e+A
  MMETSP1325-20131115|633_1  8 RAIKLESDSIVALELRGEGYYFLAEHEMA 36
               89****************99999888887 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 1.4
  PF13431.1  3 ekaleldPnn 12
               ++al+ dP++
  MMETSP1325-20131115|633_1 41 RQALKFDPEH 50
               79******86 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1.9
  PF13431.1 24 lnnGdleeAeq 34
               +++G+++eA++
  MMETSP1325-20131115|633_1 74 SEQGQHAEAIE 84
               589****9985 PP

  == domain 4    score: 5.7 bits;  conditional E-value: 0.017
  PF13431.1   3 ekaleldPnn..adaynnLAelllnnGdleeA 32 
                ++al++d ++   da+ +++e++l + +++++
  MMETSP1325-20131115|633_1 125 QEALNIDHTDsaQDARLCMGEAHLGAEEYDQS 156
                89*******99************988888875 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0       0.2   2.1e+02      31      63 ..      36      68 ..      33      69 .. 0.80
   2 ?    5.7   0.5     0.011        12       9      33 ..      67      91 ..      59      92 .. 0.84
   3 ?    8.6   1.3    0.0014       1.5       3      33 ..     118     165 ..     116     166 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.2
                HHHHHHHHHHHCTTHHCHHHHHHHHHHHHHHHH CS
  PF04212.13 31 AlelLlqalkyepnperrealrqkieeylkrAe 63
                A +++ qalk +p+ +  +   +++++ +krA+
   MMETSP1325-20131115|633_1 36 AMNHWRQALKFDPEHKSVKTKYRQLKKIMKRAD 68
                778999999999887777776677899999986 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.011
                HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF04212.13  9 ikkAveaDeagkyeeAlelYkeAle 33
                ++ A +  e+g+++eA+e  +eA+ 
   MMETSP1325-20131115|633_1 67 ADNAAQSSEQGQHAEAIETWREAIA 91
                677899999**************95 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.0014
                 HHHHHHHHHHHHHHHTT.................-HHHHHHHHHHHHH CS
  PF04212.13   3 skAlelikkAveaDeag.................kyeeAlelYkeAle 33 
                 ++A++ +++A+++D+                   +y++ +++Yk A++
   MMETSP1325-20131115|633_1 118 QNAKDAAQEALNIDHTDsaqdarlcmgeahlgaeEYDQSVHWYKAAVD 165
                 79*************7777899999999999999**********9987 PP

>> PF04761.7  Lactococcus bacteriophage putative transcription regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.1   2.2e+03       2      15 ..      32      45 ..      31      62 .. 0.75
   2 ?    3.1   0.1     0.068        72      41      54 ..     113     126 ..      76     128 .. 0.72
   3 ?    7.8   0.0    0.0023       2.4       8      25 ..     146     163 ..     144     171 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 2.1
  PF04761.7  2 eqekvvthlGevvy 15
               e e  ++h+ ++++
  MMETSP1325-20131115|633_1 32 EHEMAMNHWRQALK 45
               67888899888875 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.068
  PF04761.7  41 qLyeWsnaYkaave 54 
                ++ eW na  aa e
  MMETSP1325-20131115|633_1 113 KMNEWQNAKDAAQE 126
                4679****999977 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0023
  PF04761.7   8 thlGevvyqesvefYkkk 25 
                 hlG   y +sv +Yk  
  MMETSP1325-20131115|633_1 146 AHLGAEEYDQSVHWYKAA 163
                59**************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       839  (0.0613663); expected 273.4 (0.02)
Passed bias filter:                      516  (0.0377414); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.55u 0.42s 00:00:00.97 Elapsed: 00:00:00.69
# Mc/sec: 642.50
//
Query:       MMETSP1325-20131115|632_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-39  133.3   0.0      4e-39  133.0   0.0    1.1  1  PF00578.16 AhpC/TSA family
    2.3e-16   59.5   0.0    3.1e-16   59.1   0.0    1.1  1  PF08534.5  Redoxin
    3.2e-10   39.3   0.1    5.8e-10   38.5   0.0    1.5  1  PF10417.4  C-terminal domain of 1-Cys peroxiredoxin


Domain annotation for each model (and alignments):
>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.0   0.0   8.7e-43     4e-39       1     123 [.      18     158 ..      18     159 .. 0.97

  Alignments for each domain:
  == domain 1    score: 133.0 bits;  conditional E-value: 8.7e-43
  PF00578.16   1 vgdkapdfelk...dtdgkkvslsdl..kgkpvvLffypkdfcpvCttelpalaelyeefkkkgvevigvsvdspeshkkfaekne........lnfpllsDeegevakaygvlnee.....kglalratfvidkegkiry 123
                 v dkapdf+++    ++++++sls++  +gk+vvLffyp df++vC+te+  ++e++ ef++kgv+v+g s+ds++ h ++ ++ +        +nfpl++D ++e++ +yg+l+++     + ++lratf+id+ g+ir 
   MMETSP1325-20131115|632_1  18 VRDKAPDFKAQavvGEEFEEISLSQYteAGKWVVLFFYPFDFTFVCPTEILTFSEKAAEFEAKGVQVLGASADSHHVHLAWTKTPQedgglgtaVNFPLVADITKEISTDYGILTNDptmgyHAAPLRATFIIDPSGTIRS 158
                 679********8888889********9999************************************************************************************999**********************96 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.0   6.8e-20   3.1e-16       3     137 ..      19     167 ..      17     174 .. 0.85

  Alignments for each domain:
  == domain 1    score: 59.1 bits;  conditional E-value: 6.8e-20
                -------S...-----TT---EEHHH..HTTSEEEEE---------IIIIIH.HHHTHHHH.HH----EEEEE-SS-HHHHHHHHH.........TT.TSEEE------HHHHHT..-EE-----...-EE--EEEEEE---EEEEEE-SST.T CS
  PF08534.5   3 GdkaPdft...lplvatdgktvslsd..fkgkkvvlvfvpgafcptCsaehp.yleklaklakekgvdvvavvaqndafvkeawak.........eglkipvlsDesasfakalglrltedasag...irtpryavidedgkvvylevepep.g 137
                 dkaPdf+      v ++++++sls+   +gk vvl+f+p  f+ +C +e++ + ek a++ ++kgv+v++ +a++   v  aw+k           +++p+++D +++++ ++g+  t+d ++g     ++++++id  g ++ + v +e  g
  MMETSP1325-20131115|632_1  19 RDKAPDFKaqaV--VGEEFEEISLSQytEAGKWVVLFFYPFDFTFVCPTEILtFSEKAAEF-EAKGVQVLGASADSHH-VHLAWTKtpqedgglgTAVNFPLVADITKEISTDYGIL-TNDPTMGyhaAPLRATFIIDPSGTIRSITVNDEQvG 167
                589*****6433..57999*******99999*********************666666666.*******666665555.666666669999****9*******************65.9999999999999**************999988744 PP

>> PF10417.4  C-terminal domain of 1-Cys peroxiredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   1.3e-13   5.8e-10       2      39 ..     180     214 ..     179     215 .. 0.94

  Alignments for each domain:
  == domain 1    score: 38.5 bits;  conditional E-value: 1.3e-13
                HH---TS.S-B--TTT.T----BE---SSHHHHHHHHH- CS
  PF10417.4   2 LQladkh.gvatPAnWkPGdkvivpPppteeeavkryle 39 
                +Q+ad+h g+ +PAnWkPG+++i    + ++ ++k +++
  MMETSP1325-20131115|632_1 180 FQYADSHaGEGCPANWKPGKDTI---EANPK-GSKAFFK 214
                9**********************...*****.9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.59
# Mc/sec: 905.74
//
Query:       MMETSP1325-20131115|635_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-25   88.3   5.1    5.3e-25   87.6   3.5    1.4  1  PF08592.6 Domain of unknown function (DUF1772)
  ------ inclusion threshold ------
      0.032   13.2   9.4      0.061   12.3   6.5    1.5  1  PF12730.2 ABC-2 family transporter protein
       0.32   11.0   8.8       0.47   10.5   1.0    2.9  3  PF09600.5 Cyd operon protein YbgE (Cyd_oper_YbgE)


Domain annotation for each model (and alignments):
>> PF08592.6  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.6   3.5   1.2e-28   5.3e-25       1     136 [.      38     164 ..      38     167 .. 0.94

  Alignments for each domain:
  == domain 1    score: 87.6 bits;  conditional E-value: 1.2e-28
  PF08592.6   1 Gvflafslvvmpallrlpaaqalkawqrinkag..kafmpvlalltalafaylavaalsgsrgpaarlllaaaaalllgivpvTllanvPtNnkLaaadvakkkeaaaadwveellskWtrlnlvRtvlalaafllll 136
                Gv++af+++vm+ l++l++a+a++a+q+in ++  +a  +++++++ +++ ++a+        +++ l ++ a ++ +g v vT l+nvP+Nn+L  ad+++++  a+++w  ++ s+W+r+n vRt++ laa+  ++
  MMETSP1325-20131115|635_1  38 GVCYAFATFVMQSLDTLEPAEAIRAMQAINITIigSATIALWFATVPISICAAAL--------RGTPLSIISAIVYGVGAVFVTGLGNVPLNNEL--ADTNPTAPGAQEAW-DKYYSRWNRWNIVRTLMFLAAAFGFV 164
                99*******************************9999999********9777777........8899****************************..6666**********.*********************98776 PP

>> PF12730.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   6.5   1.3e-05     0.061     101     187 ..      26     132 ..      23     174 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.3e-05
  PF12730.2 101 lllslllslvlllisliaglllggggfdls......llleflllllllsllvlllllli.lfl.silfknslvaiiiglllillglllssllsg.............s 187
                ll+s ++s+ ++++ ++++ ++  + +d+         ++++ ++++ s+ ++l+++ + + + ++ ++++ ++ii +++++++ +++++l +               
  MMETSP1325-20131115|635_1  26 LLFSSVASATIAGVCYAFATFVM-QSLDTLepaeaiRAMQAINITIIGSATIALWFATVpISIcAAALRGTPLSIISAIVYGVGAVFVTGLGNVplnneladtnptaP 132
                56666666666666666666653.445555566666999999999999999999998888776488**********************99988555555544444440 PP

>> PF09600.5  Cyd operon protein YbgE (Cyd_oper_YbgE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1    0.0087        40      34      62 ..      22      50 ..      12      71 .. 0.82
   2 ?   10.5   1.0    0.0001      0.47      16      55 ..      80     119 ..      59     122 .. 0.82
   3 ?   -0.6   0.1      0.29   1.3e+03       2      48 ..     151     164 ..     148     176 .. 0.65

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0087
  PF09600.5 34 llallliwavcagvihGvGFrprswlwkl 62
                +a ll+ +v+++ i Gv +     + + 
  MMETSP1325-20131115|635_1 22 TQASLLFSSVASATIAGVCYAFATFVMQS 50
               578899999********998877666665 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.0001
  PF09600.5  16 lvlvnpsafaaaigglnallallliwavcagvihGvGFrp 55 
                + +v +s  aaa++g   +++ +++++v a ++ G+G  p
  MMETSP1325-20131115|635_1  80 FATVPISICAAALRGTPLSIISAIVYGVGAVFVTGLGNVP 119
                4456678899**************************9665 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.29
  PF09600.5   2 lraLslilAlllaalvlvnpsafaaaigglnallallliwavcagvi 48 
                +r+L++++A++                                  ++
  MMETSP1325-20131115|635_1 151 VRTLMFLAAAFG---------------------------------FV 164
                456666665543.................................33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       674  (0.0492978); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.91
# Mc/sec: 539.84
//
Query:       MMETSP1325-20131115|637_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       487  (0.0356202); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.35s 00:00:00.94 Elapsed: 00:00:00.67
# Mc/sec: 1019.35
//
Query:       MMETSP1325-20131115|638_1  [L=389]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-87  291.7   0.0      2e-56  191.5   0.0    2.0  2  PF03074.11 Glutamate-cysteine ligase
  ------ inclusion threshold ------
       0.13   12.1   0.0       0.28   11.1   0.0    1.5  1  PF10929.3  Protein of unknown function (DUF2811)


Domain annotation for each model (and alignments):
>> PF03074.11  Glutamate-cysteine ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.5   0.0     3e-60     2e-56     123     270 ..       4     162 ..       1     173 [. 0.86
   2 !   98.3   0.0   5.9e-32     4e-28     273     369 ..     207     303 ..     193     305 .. 0.96

  Alignments for each domain:
  == domain 1    score: 191.5 bits;  conditional E-value: 3e-60
                 ----SS-S--HHHHHHHHHHTTS--S--BCGGGS.--TTT--HHHHHHHTTSB-SEEEE--.......TT-T.----EEEE---B--SSHHHHHHHHHHHHHHHHHHHHTTB-----HHHHHHHHHHTTBTTHHHH-EEEEES-S............CS CS
  PF03074.11 123 leklleegiderlakhiahlfirdPlvvfeekie.lddktssehfeniqstnWqtlrfkpP.......ppds.diGWrvefrpmevqltdfenaaysvfvvlltrailsfklelliklskvdenmkvahkrdavleekflfrkdicksan..gaekvea 270
                  + +l+++ d+ la+h+ahlf+rdPlvvfe  +e + d++ ++h+eniqstnWqt+r+kpP       ++d  +iGWr efr+mevq+tdfenaa+svf+vlltr+++ f+l+l+++ls+vdenmk+a+k+dav +ekf+frk+++ + +   ++ ++ 
   MMETSP1325-20131115|638_1   4 RDLVLQATGDHMLARHVAHLFVRDPLVVFEGAVEeVPDEEATDHWENIQSTNWQTMRWKPPppqdpdhADDGnQIGWRTEFRAMEVQMTDFENAAFSVFIVLLTRVLFVFDLDLVMPLSLVDENMKRAQKIDAVCKEKFFFRKHMVPGHAgqNCSSCDP 162
                 566778888**********************996368999********************96666555233348***********************************************************************55444335666655 PP

  == domain 2    score: 98.3 bits;  conditional E-value: 5.9e-32
                 ---EEEEEHHHHHH-----TTTTHH-SS-GGGGGG-TTTHH..HHHHHHHHHHHH------HHHHHHHHHHC-TT--SSS---HHHHHHHHHHHHHH CS
  PF03074.11 273 deeaeelsideiingkegefpgliplvrsyleeeevdvdtrcsiekylkliskrasGelktaakylrefvakhPdykhdskitdeiaydllkkvdkl 369
                 d+++ee+++dei+ngk + fpgl+pl   yl++++ d++   +++ yl++is ra+ ++kt a ++r+fv +hP+y +ds+++  ia+dl+k +d++
   MMETSP1325-20131115|638_1 207 DDTVEEMTMDEIFNGKGDYFPGLVPLCYAYLDHMNCDKKAFSKLDGYLRFISARAAAQVKTDAGWIRDFVLNHPEYAKDSVVSPAIAHDLVKACDEV 303
                 788999****************************************************************************************987 PP

>> PF10929.3  Protein of unknown function (DUF2811)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   4.1e-05      0.28      14      42 ..     272     300 ..     269     313 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.1e-05
  PF10929.3  14 lkefieshPnWDqyrllqaALagFLlqnG 42 
                +++f+ +hP++ ++ +++ A+a+ L++ +
  MMETSP1325-20131115|638_1 272 IRDFVLNHPEYAKDSVVSPAIAHDLVKAC 300
                679*******************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.35s 00:00:01.04 Elapsed: 00:00:00.86
# Mc/sec: 1083.93
//
Query:       MMETSP1325-20131115|643_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 650.44
//
Query:       MMETSP1325-20131115|639_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   13.4   1.6      0.045   12.7   1.1    1.3  1  PF00641.13 Zn-finger in Ran binding protein and others


Domain annotation for each model (and alignments):
>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.1   3.3e-06     0.045       7      26 ..     123     143 ..     122     144 .. 0.95

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.3e-06
  PF00641.13   7 CskCl.vqNfawstkCvaCqa 26 
                 C++C+ vq  + s++C++C+a
   MMETSP1325-20131115|639_1 123 CPVCTfVQENPDSLTCEMCGA 143
                 *******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       566  (0.0413985); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.42s 00:00:01.03 Elapsed: 00:00:00.62
# Mc/sec: 989.46
//
Query:       MMETSP1325-20131115|645_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.7    5.3   8.3        6.4    5.2   5.8    1.0  1  PF04625.8 DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   5.8   0.00047       6.4     108     165 ..       6      62 ..       2      66 .. 0.76

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.00047
  PF04625.8 108 pvpapapaaaaapaaasapaadspaasvpdaaqpailgqaalqnaftflnpsnfdass 165
                 v ap p aaaap+   +  + +p      aa  a    aa+  a tfl p       
  MMETSP1325-20131115|645_1   6 LVAAPPPFAAAAPPLRVSGETAPPNR-GQTAAAAAAAAAAAITTASTFLSPVGVGMDG 62 
                689999*99**999988776665555.4556667778899**********98766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.70
# Mc/sec: 229.37
//
Query:       MMETSP1325-20131115|647_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   13.3   0.0      0.076   13.1   0.0    1.1  1  PF09335.6 SNARE associated Golgi protein


Domain annotation for each model (and alignments):
>> PF09335.6  SNARE associated Golgi protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   5.6e-06     0.076       6      54 ..      15      62 ..      12      79 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 5.6e-06
  PF09335.6  6 llvaaGvlfglllgtlvtllgallgallayllgrylgkkalrrkllsek 54
               + +++G++f++l++ l+ ++g+ l + l +l+++y+  ++l++k   ++
  MMETSP1325-20131115|647_1 15 YYIVGGLVFSPLSVPLLESMGSELTDPLLFLAFQYMS-DNLNKKKEGQE 62
               5699********************************9.66666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.64
# Mc/sec: 325.75
//
Query:       MMETSP1325-20131115|648_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.66
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|646_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.4    8.0   5.8          2    7.5   4.0    1.1  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   4.0   0.00015         2     214     268 ..      46      94 ..      35      97 .. 0.51

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00015
                 ..--CSC--XXXXXXXXXXXXXXXXXXXX........XXXXXX...XXXXXXXXX CS
  PF01213.14 214 daaaaksalaavsasktaaPppPpppppPsvdtikdsvesaksdskgslgavFae 268
                  + aa++a + + +  ++aPp+P++pp+P      ++ ++ ++  +++++ +Fa 
   MMETSP1325-20131115|646_1  46 AVGAAVAASPYTPTPTPSAPPAPSAPPAP------SAPPAVHRSFSDDVSDIFAG 94 
                 33444444444445555555555444444......23344444445777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1296.60
//
Query:       MMETSP1325-20131115|650_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-08   33.0   0.0    4.1e-08   32.9   0.0    1.0  1  PF04190.8 Protein of unknown function (DUF410)
  ------ inclusion threshold ------
      0.034   13.9   0.0       0.23   11.3   0.0    1.9  1  PF10888.3 Protein of unknown function (DUF2742)
       0.12   12.0   0.0       0.13   11.8   0.0    1.1  1  PF13758.1 Prefoldin subunit


Domain annotation for each model (and alignments):
>> PF04190.8  Protein of unknown function (DUF410)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0     9e-12   4.1e-08     194     256 ..      12      74 ..       4      75 .] 0.96

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 9e-12
                HHHHHHHHHHHT-HHHHHHHHHHTHH...HHHHTHHHHHH---TTT---S-----.------- CS
  PF04190.8 194 FlhlLllvidtkdkaqfleLkkkYqksLkrdlafkeylakigklYFgirpekqtsgglgglls 256
                F  l++ +++ +  a f+eL++ +   + rd++ k+ +  igk YFgi p++ +  +  ++ls
  MMETSP1325-20131115|650_1  12 FCALIVETCQHDAAAEFQELTQTWASLIDRDPSNKASIRVIGKKYFGIEPPQDMMTTVMNMLS 74 
                888999*************************************************9*****98 PP

>> PF10888.3  Protein of unknown function (DUF2742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0     5e-05      0.23      29      65 ..      32      67 ..      13      75 .] 0.80

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 5e-05
  PF10888.3 29 tPawsalddadPvklaaildaarhwvlrvetaqeasa 65
               t +w++l d+dP   a+i + ++ +   +e  q+ ++
  MMETSP1325-20131115|650_1 32 TQTWASLIDRDPSNKASIRVIGKKYF-GIEPPQDMMT 67
               779******************99884.6777776665 PP

>> PF13758.1  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.9e-05      0.13       9      44 ..      23      58 ..      18      71 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.9e-05
  PF13758.1  9 eseaeydelkeeleelkeeddatkedllrirrdfeg 44
               +  ae++el + +++l + d+++k++++ i++++ g
  MMETSP1325-20131115|650_1 23 DAAAEFQELTQTWASLIDRDPSNKASIRVIGKKYFG 58
               5678****************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 285.28
//
Query:       MMETSP1325-20131115|651_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.60
# Mc/sec: 583.11
//
Query:       MMETSP1325-20131115|649_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-78  263.2   0.6    4.6e-78  263.1   0.4    1.0  1  PF00450.17 Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> PF00450.17  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.1   0.4   3.4e-82   4.6e-78      84     418 .]       2     377 ..       1     377 [. 0.89

  Alignments for each domain:
  == domain 1    score: 263.1 bits;  conditional E-value: 3.4e-82
                 GCSEEEEE--STT----B------...STTT---HHHHHHHHHHHH-CHHCH--EEEE--TT---HHHHHHHHHHC-SS-....SS-EEEEEE------HHHHGGGHHH-------S-HHHHHHHHHCH................HHH---HHHHHHH--HHHHHHHHHHHH---TT-TTS--................................-----SSTTHHHHHHHHCSCCHHHH--......--SSS--S--HHHHHT---TT.S-TCHHHHHHHHTT....--EEEEE----STT-----HHHHCC--STTHH..HHHHS--B..BTT-SB---EEEE......TTEEEEE-------HHHH-HHHHHHHHHHHH-- CS
  PF00450.17  84 kvanvlfldqPvgvGFSysntssdyktddeetaedlyefLkkffekfpeyksrdfyitGESYaGhyvPalakeileenkkgekpninlkGvligNglideatqvnsyvefayehgliseeeyeklkkackkna............kalekestkcaklveeaskevvlkengginvyniyedcct.lss...................lkksstdsqggldcysesavekylnreeVrkalhvnk...aevkeweecndevfeqtgddvsksveeilekllesg....lrvliysGdvDlicnflgteawikklnlsgkk..efrpwevs..ledgqvaGyvkey......rnltfltvkgaGHmvpedqPeaalqmikrflsg 418
                 k+an+lf++qPvgvGFSys+++sdy+t+d ++a+d+y+++ +f++ +p +k +dfyit ESY+Ghy+P+lak+i+++  ++  + +n++G+++gN+++++ ++    ++ +y+h+  +++ y++ + +c  ++             +l+ +  +c +  +++      + ++++n+y +  ++c  +                     ++ + + + +g+ +++++++++ylnr +V+ a+h++    ++ ++w+ec+ ++ ++++ d+++++ +i+e ll+++    l +l+ysGd D++c ++g+++wi  l++++++  ++r+w++      +q++G+  ++      +n++f+t +g GH+vp+++P+ al++++++lsg
   MMETSP1325-20131115|649_1   2 KAANMLFIEQPVGVGFSYSDDRSDYSTGDYQAAQDNYAAILQFMNAYPDLKDNDFYITAESYGGHYMPTLAKTIVDNDPDR--NAVNFRGFAVGNPYTSTVSNNVGEFKTLYGHQACQKKAYDSWEANCGAHYgeqkdfeldgqsYDLDAKPLRCVADETNML----ARVEKNLNPYALDFPTCPhS-FgekqrmafkahqegklleeIEAEVEGTIDGYEPCTDDYATTYLNRFDVQAAIHATPadaTSATRWSECSYSL-RYNHSDSRTPMMPIYEFLLDRTnefdLDILVYSGDDDVVCATIGSQEWIYDLGFDTQDlhGWRAWKYMddNFGKQTGGFQVNFdkrhmsGNFAFVTAHGCGHEVPTYKPQLALEIFRNYLSG 377
                 79**************************************************************************99886..7*********************************************9998887665555443333333334444444433....35667***********9951.3456789999*******9997777778999*************************98999999**********.8999***************9999999*************************9988775449******6544999*****999999988888***************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.40s 00:00:01.07 Elapsed: 00:00:00.73
# Mc/sec: 1263.83
//
Query:       MMETSP1325-20131115|652_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-62  207.0   0.6    1.2e-61  206.7   0.5    1.1  1  PF00071.17 Ras family
    3.6e-21   75.7   0.0    6.4e-21   74.9   0.0    1.4  1  PF08477.8  Miro-like protein
    6.8e-15   54.6   0.1    8.5e-15   54.3   0.1    1.1  1  PF00025.16 ADP-ribosylation factor family
    1.2e-07   31.6   0.1    1.7e-07   31.1   0.1    1.3  1  PF01926.18 50S ribosome-binding GTPase
    4.6e-05   22.8   0.1    0.00013   21.3   0.1    1.7  1  PF00009.22 Elongation factor Tu GTP binding domain
    0.00024   20.2   1.3     0.0024   17.0   0.9    2.0  1  PF02421.13 Ferrous iron transport protein B
    0.00025   20.1   0.0    0.00037   19.5   0.0    1.3  1  PF13175.1  AAA ATPase domain
    0.00028   20.9   0.0    0.00073   19.5   0.0    1.6  1  PF13401.1  AAA domain
    0.00052   19.1   0.1    0.00071   18.6   0.1    1.2  1  PF04670.7  Gtr1/RagA G protein conserved region
     0.0011   18.4   0.1      0.002   17.4   0.0    1.7  1  PF10662.4  Ethanolamine utilisation - propanediol utilisation
     0.0031   16.6   0.1     0.0051   15.9   0.1    1.5  1  PF03193.11 Protein of unknown function, DUF258
     0.0078   15.3   0.1      0.017   14.2   0.0    1.6  1  PF09439.5  Signal recognition particle receptor beta subunit
  ------ inclusion threshold ------
      0.015   14.2   0.0      0.021   13.6   0.0    1.2  1  PF07693.9  KAP family P-loop domain
      0.024   14.9   0.0      0.039   14.2   0.0    1.6  1  PF13191.1  AAA ATPase domain
      0.036   13.8   0.0      0.066   13.0   0.0    1.6  1  PF13173.1  AAA domain
      0.075   12.6   0.1       0.13   11.8   0.0    1.9  1  PF07728.9  AAA domain (dynein-related subfamily)
      0.075   12.8   0.1       0.12   12.1   0.0    1.3  1  PF13304.1  AAA domain
       0.08   12.3   0.0        0.2   11.0   0.0    1.7  1  PF13555.1  P-loop containing region of AAA domain
      0.082   12.3   0.1       0.11   11.9   0.0    1.5  1  PF13479.1  AAA domain
      0.084   12.4   0.1       0.12   11.9   0.1    1.4  1  PF03266.10 NTPase


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.7   0.5   1.7e-64   1.2e-61       1     161 [.      35     195 ..      35     196 .. 0.99

  Alignments for each domain:
  == domain 1    score: 206.7 bits;  conditional E-value: 1.7e-64
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 K+vl+Gds+vGK++ll rf++++F+ e++sTigv+f tk+i+++gk++k +iwDTAGqe++++++s+yyr+a g+llvydi+++ +f+nv++w+ e++++ae +++++LvGnK+Dl++ r+v++ee+ ++a+e++l f+etSA++ ++veeaf+++l+ei+
   MMETSP1325-20131115|652_1  35 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSINTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKITFDNVQRWLGELRNHAEAGIVVMLVGNKSDLRHLRTVQMEEATQFAEEQNLFFVETSANEGTGVEEAFTSILTEIY 195
                 9************************************************************************************************************************************************************9986 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   9.4e-24   6.4e-21       1     119 []      35     149 ..      35     149 .. 0.90

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 9.4e-24
  PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                kvv++Gd+gvGKs lls++++ ef      + ++g + a k+++++++t + ++wd++g+e+  +      + a ++llvyd++++ ++++v++ l +l++ +   +  i+v+lvgnk D
  MMETSP1325-20131115|652_1  35 KVVLIGDSGVGKSNLLSRFTRNEFN--LESKSTIGVEFATKSINTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKITFDNVQRWLGELRNHA---EAgIVVMLVGNKSD 149
                8************************..778889999999**********************999976666*********************966655555555...555*********98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.1   1.2e-17   8.5e-15      14     173 ..      33     192 ..      20     194 .. 0.83

  Alignments for each domain:
  == domain 1    score: 54.3 bits;  conditional E-value: 1.2e-17
                 EEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHHHHHHH CS
  PF00025.16  14 elrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlse 173
                  ++++l+G  + GK+ +l +++ +e++   + Tig  f ++++++  k++k ++wD  Gqe+ R + + Y++   + + v D +++  +++ ++ L +l ++ e   +++++++NK Dl++   + +++e+ +      +++l  +++sa +g+g++e+++ +  
   MMETSP1325-20131115|652_1  33 LFKVVLIGDSGVGKSNLLSRFTRNEFNLeSKSTIGveFATKSINTegKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKITFDNVQRWLGELRNHAEA-GIVVMLVGNKSDLRHL-RTVQMEEATQFA---EEQNLFFVETSANEGTGVEEAFTSILT 192
                 579*********************9975388898822455556557799*************************************************9988875.6777778******864.445555555444...4668999**************998765 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.1   2.5e-10   1.7e-07       1     110 [.      35     143 ..      35     173 .. 0.71

  Alignments for each domain:
  == domain 1    score: 31.1 bits;  conditional E-value: 2.5e-10
                 EEEEE--TT---HHHHHHHHCST....CTEETS-TT-SSSE.SEEEEETTEEEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTSHHHHHHHHHHHHH.......HTCCCEEE CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgek....aakvsdypgtTrdi.tenevkkekiilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasavlkeadkellnel.......eakkplil 110
                 +v+++G + vGKS L+ + t+++     + +  + + T++i te++ +k   +++Dt+G           e+++ ++ +  + a ++llv d+s+  k +  ++ ++l       ea++ ++l
   MMETSP1325-20131115|652_1  35 KVVLIGDSGVGKSNLLSRFTRNEfnleSKSTIGVEFATKSInTEGKTIK--AQIWDTAG----------QERYRAITSAYyRGAVGALLVYDISK--KITFDNVQRWLgelrnhaEAGIVVML 143
                 699*****************74343435567777899****44444222..47******..........23567777777799999999999765..33444554454333433224444444 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   1.9e-07   0.00013      45     184 ..      57     192 ..      32     200 .. 0.72

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 1.9e-07
                 HCCHHHH---BBSSEEEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.....S-HHHHHHHHHHHHTT--EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHH CS
  PF00009.22  45 klkeerergiTiksaaisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqTeevlrlakklgvkiivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaive 184
                 +++ e +  i ++ a+ s+++e+k+ + ++ Dt G + + + +++  r + ga+lv d ++      v+    e+ ++a + g+ +++v NK D+ + +  ++ e  +  +     e+  ++  +v +Sa +g+g+++ +  i++
   MMETSP1325-20131115|652_1  57 EFNLESKSTIGVEFATKSINTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKitfdnVQRWLGELRNHA-EAGIVVMLVGNKSDLRHLRTVQMEEATQ--F----AEE--QNLFFVETSANEGTGVEEAFTSILT 192
                 45667777777777777777779999**********************************9843333444444433333.4566677889****98666555544444..5....222..2578999999999999876655554 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.9   3.4e-06    0.0024       2     168 ..      35     202 ..      34     220 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 3.4e-06
                 EEEEE--TT---HHHHHHH----TB--------S--BB--EEETTEEE..EEEE------SSSSS.HHHHHHHHHHHHH--SEEEEEEEGGGHHHHHHHHHHHHHTT-SEEEEEETHHHHHC---EB-.HHHHHHH----EEEEBCCGTB--HHHHHHHHHHCTCG-XXX. CS
  PF02421.13   2 tvalvGnpnvGKttlfnaltgakqkvgNwpGvTVekkegklklkgkev..eivDLPGiYsLsays.eeekvardylleekpdviinvvDasnlernLyLtlqllelgvpvvvalnmiDeaekkgikid.lkkLselLgvpvvktvarkkkgieelleaiievaekeekekk 168
                 +v+l+G+  vGK+ l+ + t  + +    + + Ve ++ +++++gk++  +i D  G     a++    + a   ll  +       +   n++r L  + +  e g+ v+++ n+ D  + + ++++ +++++e+ ++  v+t+a++++g+ee +++i++ + +  ++k+
   MMETSP1325-20131115|652_1  35 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSINTEGKTIkaQIWDTAGQERYRAITsAYYRGAVGALLVYDISK---KITFDNVQRWLGELRNHAEAGIVVMLVGNKSDLRHLRTVQMEeATQFAEEQNLFFVETSANEGTGVEEAFTSILTEIYHLISKKQ 202
                 799*************************999999999999998886552289*****96666544034455555555443333...344689******************************9999972579**********************99999655544333333 PP

>> PF13175.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   5.4e-07   0.00037      26      91 ..      37     103 ..      18     138 .. 0.79

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 5.4e-07
  PF13175.1  26 viiGeNgsGKttILealeklknrknmlfikknlklkieglfkllvkekkkikisesdnkadidky......n 91 
                v+iG +g+GK+++L+     + ++++l+ k  +++++e+ +k ++ e k ik +++d   ++++       +
  MMETSP1325-20131115|652_1  37 VLIGDSGVGKSNLLSRF---TRNEFNLESK--STIGVEFATKSINTEGKTIKAQIWDTAGQERYRaitsayY 103
                89************998...4445545444..5************************999998765544440 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   1.1e-06   0.00073       7     129 ..      36     152 ..      35     154 .. 0.69

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 1.1e-06
  PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapast...spkellqkllsalglpakgrltteellealqealrrrrtrlliiDEaqrLseealeelrslldd.etgvklvlvGtp.elek 129
                +v++G sGvGK+ ll r+ r+     ++ e+ +++ ve + ++   + k++  ++    g++  +  t++ ++ a+   l     + +  D++qr     l el    ++ e+g+ + lvG   +l++
  MMETSP1325-20131115|652_1  36 VVLIGDSGVGKSNLLSRFTRNE----FNLESKSTIGVEFATKSintEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKITFDNVQR----WLGEL---RNHaEAGIVVMLVGNKsDLRH 152
                689*****************85....333478888666666666669999999999999987666333333334444444444445666666666....44555...555589999999999988887 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1     1e-06   0.00071       1     171 [.      35     190 ..      35     207 .. 0.64

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 1e-06
  PF04670.7   1 klLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrfl.gnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspeakvfvli.hKmDlis....edereeifeerkeeireeiedleieeleffaTSiwdes.lykAwSkv 171
                k++L+G sg GK+ + s    n    +  + ++ ++   +++++  + +k ++wD+ Gqe++ + +    + +    v++l+ V Di+    + ++++ q+ l  l+++ +   v +l+ +K Dl +    ++e+ + f+e ++             l f +TS+ + + + +A++++
  MMETSP1325-20131115|652_1  35 KVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATKSINTEgKTIKAQIWDTAGQERYRAIT----SAYYRGAVGALL-VYDIS---KKITFDNVQRWLGELRNHAEAGIVVMLVgNKSDLRHlrtvQMEEATQFAEEQN-------------LFFVETSANEGTgVEEAFTSI 190
                89************9999887766655332.333333344444441578**********9988875....677778899987.99**9...35689999999999999988877777775688865332222222233333333.............333344443333233333333 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0     3e-06     0.002       3      54 ..      35      88 ..      33     192 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 3e-06
  PF10662.4  3 killiGkvgaGKTtLtqalkgee..lkykkTQaielseeviDtPGeYlenrrly 54
               k++liG +g+GK  L  + + +e  l+ k+T  +e+ ++ i t G+ ++ + + 
  MMETSP1325-20131115|652_1 35 KVVLIGDSGVGKSNLLSRFTRNEfnLESKSTIGVEFATKSINTEGKTIKAQIWD 88
               89****************98866226889999*************999887664 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   7.4e-06    0.0051      38      60 ..      36      69 ..      28     138 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 7.4e-06
                EEEE-------HHHHHHH----...........- CS
  PF03193.11 38 svlvGqSGvGKSsLinallpel...........d 60
                +vl+G SGvGKS L+ +++ ++           +
   MMETSP1325-20131115|652_1 36 VVLIGDSGVGKSNLLSRFTRNEfnleskstigvE 69
                69*************9998876555555544442 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   2.4e-05     0.017       5      67 ..      35     100 ..      32     177 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2.4e-05
                EEEEE--TT---HHHHHHHHHSS-------S.S-EEETT-.....-----EEEE----GGGGHHHH CS
  PF09439.5   5 avllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv..ksekgkkltliDfPGheklrqkll 67 
                +v+l+G s  GK  l+ r t ++++    S    ++a+k   ++ k  k ++ D  G+e+ r   +
  MMETSP1325-20131115|652_1  35 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTiGVEFATKSinTEGKTIKAQIWDTAGQERYRAITS 100
                589*******************998888777677777777344445567899*******9997444 PP

>> PF07693.9  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.1e-05     0.021      23      89 ..      36     207 ..      28     214 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.1e-05
  PF07693.9  23 iglyGkWGsGKssllnlledelkef.........................................................................................................kpvrflfaeinpwsskggddavaallaaladaleeeagalat 89 
                ++l G  G+GKs ll ++ ++  +                                                                                                          +++  +f+e ++   +g ++a+ ++l ++++ + ++ +  a 
  MMETSP1325-20131115|652_1  36 VVLIGDSGVGKSNLLSRFTRNEFNLeskstigvefatksintegktikaqiwdtagqeryraitsayyrgavgallvydiskkitfdnvqrwlgelrnhaeagivvmlvgnksdlrhlrtvqmeeatqfaEEQNLFFVETSANEGTGVEEAFTSILTEIYHLISKKQTMAAE 207
                6666777********9986544333599******************************************************************************************************999****************************99998876665 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.6e-05     0.039      26      48 ..      36      58 ..      27     144 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 5.6e-05
  PF13191.1 26 llvtGpsGiGKSsLlrelakpil 48
               ++++G+sG+GKS Ll ++ ++ +
  MMETSP1325-20131115|652_1 36 VVLIGDSGVGKSNLLSRFTRNEF 58
               78***************887655 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   9.6e-05     0.066       5      79 ..      36     130 ..      34     189 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 9.6e-05
  PF13173.1   5 lvitGpRrvGKttllkqlakell..keesilyinlddeel.................rkladpellelfleklke...............kkkylflDEiqevpeweda 79 
                +v++G  +vGK+ ll ++ ++++  +++s++ +++ +++                  ++      ++++     +                kk + +D++q+   w   
  MMETSP1325-20131115|652_1  36 VVLIGDSGVGKSNLLSRFTRNEFnlESKSTIGVEFATKSIntegktikaqiwdtagqER------YRAIT----SayyrgavgallvydiSKK-ITFDNVQR---WLGE 130
                7899999**************99999999999999998874444443333332222211......11111....0222233445555554434.77777775...4444 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00019      0.13       2      21 ..      36      55 ..      35     190 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00019
               EEEE------HHHHHHHGGG CS
  PF07728.9  2 vlLvGppGtgKselaerlae 21
               v+L+G++G+gKs l  r+ +
  MMETSP1325-20131115|652_1 36 VVLIGDSGVGKSNLLSRFTR 55
               89************999875 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00018      0.12       3      58 ..      37      85 ..      36     104 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00018
  PF13304.1  3 viiGpNgsGKSnlLkaldflfrdelvlglnldrslnvniekipflldeeeieipie 58
               v+iG+ g+GKSnlL+       ++ +++ nl++   ++ e+  +++++e+++i+ +
  MMETSP1325-20131115|652_1 37 VLIGDSGVGKSNLLS-------RFTRNEFNLESKSTIGVEFATKSINTEGKTIKAQ 85
               8*************8.......7777777777777777777777777777776665 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00029       0.2      25      40 ..      35      50 ..      18      54 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00029
  PF13555.1 25 ntlltGasGsGKSTll 40
               +++l+G+sG+GKS ll
  MMETSP1325-20131115|652_1 35 KVVLIGDSGVGKSNLL 50
               479**********987 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00016      0.11       4      55 ..      34      90 ..      33     211 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00016
  PF13479.1  4 ikvliYGkpGiGKTslaktl.......pktlfldleagakavkdlkrgdsvdvrswqdl 55
               +kv++ G++G+GK+ l++++       ++   + +e  +k+++    g++++ + w++ 
  MMETSP1325-20131115|652_1 34 FKVVLIGDSGVGKSNLLSRFtrnefnlESKSTIGVEFATKSINTE--GKTIKAQIWDTA 90
               69****************997666666666677777776666544..666666666655 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00018      0.12       2      77 ..      36     113 ..      35     144 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00018
                 EEEE-------HHHHHHHHHH...-...---EE--EEE-----------EEE--.---EEE---TT---SS-------- CS
  PF03266.10   2 vfiTGepgvGKtTlvkkvlel...lksegvkvgGfyteevreggrrigfdivdlasgergilarvkgkreprvgkyvvn 77 
                 v++ G++gvGK+ l+++++++   l+s+      f t+ +  +g+ i  +i d   g++ + a +++  + +vg   v 
   MMETSP1325-20131115|652_1  36 VVLIGDSGVGKSNLLSRFTRNefnLESKSTIGVEFATKSINTEGKTIKAQIWDT-AGQERYRAITSAYYRGAVGALLVY 113
                 7899*************998433376665555569*******************.777776666666777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      382  (0.0279403); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.64u 0.41s 00:00:01.05 Elapsed: 00:00:00.60
# Mc/sec: 886.65
//
Query:       MMETSP1325-20131115|655_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   28.5   0.1    1.3e-06   28.3   0.0    1.0  1  PF12697.2  Alpha/beta hydrolase family
    2.4e-06   27.1   0.0    2.6e-06   27.0   0.0    1.0  1  PF00561.15 alpha/beta hydrolase fold
    5.3e-05   22.8   0.0      6e-05   22.7   0.0    1.0  1  PF12695.2  Alpha/beta hydrolase family
      0.004   16.4   0.0     0.0044   16.3   0.0    1.0  1  PF00756.15 Putative esterase
  ------ inclusion threshold ------
      0.011   15.1   0.0      0.012   15.1   0.0    1.1  1  PF07819.8  PGAP1-like protein
      0.017   13.4   0.0      0.019   13.3   0.0    1.0  1  PF03096.9  Ndr family
      0.058   12.5   0.0      0.058   12.5   0.0    1.0  1  PF10503.4  Esterase PHB depolymerase


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   6.6e-10   1.3e-06      41      93 ..       9      60 ..       2      60 .. 0.86

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 6.6e-10
               -S...S--HHHHHHHHHHHH.HH--.--EEEE--------HHHHHH----.EEE CS
  PF12697.2 41 ppdydpdtledlaadlaall.dalglrpvvlvGHSlGgavalaaaarrpdlvrg 93
               ++    +++e  +++l  +l d+lg   v+lvG S+Ggava+++  ++pd v++
  MMETSP1325-20131115|655_1  9 TD--KEYSFELITSALNSVLtDELGVSSVHLVGESFGGAVAQHFTLQHPDSVAS 60
               33..4689999999**9988789999************************9975 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.3e-09   2.6e-06      22      71 ..      10      60 ..       3      60 .. 0.83

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 1.3e-09
                GGGGSHHHHHHHHHHHHH.HSTSSSEEEEE-B---HHHHHHHHHCGGGEEE CS
  PF00561.15 22 lphyttddlardleavld.alglkkltlvGhSmGGmialayaaeypdrvka 71
                + +y ++ +  +l+ vl  +lg+ +++lvG S+GG+ a ++ +++pd+v++
   MMETSP1325-20131115|655_1 10 DKEYSFELITSALNSVLTdELGVSSVHLVGESFGGAVAQHFTLQHPDSVAS 60
                5566777777777777655****************************9985 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   3.1e-08     6e-05      39      83 ..      15      59 ..       3      60 .. 0.80

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 3.1e-08
  PF12695.2 39 asegaaaakrvlaadlldleriilvGhSlGGgvalelagrd.drvk 83
                   ++a+++vl  d l+++ ++lvG S+GG+va ++  ++ d+v+
  MMETSP1325-20131115|655_1 15 FELITSALNSVL-TDELGVSSVHLVGESFGGAVAQHFTLQHpDSVA 59
               334455999999.8888********************999977765 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.2e-06    0.0044      91     140 ..      10      58 ..       3      60 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 2.2e-06
                 HTCHC.HHHHTCHHHHHHHHH-B----EEEE--THHHHHHHHHHHH-TTT- CS
  PF00756.15  91 aeaye.tfltqeLlplldanfrtapdgravaGqSmGGlgALilalkhpdrF 140
                  ++y  + +t+ L ++l +++ +++    ++G S+GG +A +  l+hpd+ 
   MMETSP1325-20131115|655_1  10 DKEYSfELITSALNSVLTDELGVSSV--HLVGESFGGAVAQHFTLQHPDSV 58 
                 56677788999999*********999..9*******************986 PP

>> PF07819.8  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   5.9e-06     0.012      64     104 ..      12      52 ..       5      60 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 5.9e-06
  PF07819.8  64 eylnqairkilslysssekeptsviliGHSmGGlVArsalt 104
                ey  + i   l+   + e   +sv l+G S GG VA+  + 
  MMETSP1325-20131115|655_1  12 EYSFELITSALNSVLTDELGVSSVHLVGESFGGAVAQHFTL 52 
                5555556666666667778899**************98654 PP

>> PF03096.9  Ndr family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.8e-06     0.019      80     125 ..      13      59 ..       5      60 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 9.8e-06
  PF03096.9  80 pslddladqllavl.dhfklksviglGvgaGAyilarfalkhperve 125
                 s + ++  l++vl d + ++sv  +G+  G  +  +f+l+hp+ v 
  MMETSP1325-20131115|655_1  13 YSFELITSALNSVLtDELGVSSVHLVGESFGGAVAQHFTLQHPDSVA 59 
                47888999999998568***************************996 PP

>> PF10503.4  Esterase PHB depolymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     3e-05     0.058      83     123 ..      21      59 ..       8      61 .] 0.78

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3e-05
  PF10503.4  83 alvdalvdehrvdaarvyvaGlsaGaaladllalhypdvfa 123
                al   l+de  +  + v++ G s G+a+a+  +l +pd  a
  MMETSP1325-20131115|655_1  21 ALNSVLTDE--LGVSSVHLVGESFGGAVAQHFTLQHPDSVA 59 
                444444555..456889*********************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 247.76
//
Query:       MMETSP1325-20131115|656_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.59
# Mc/sec: 1023.53
//
Query:       MMETSP1325-20131115|654_1  [L=452]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-39  133.9   0.0    8.2e-39  132.7   0.0    1.7  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    6.9e-08   32.2   0.1      3e-07   30.1   0.0    2.1  2  PF07728.9  AAA domain (dynein-related subfamily)
    2.5e-07   30.6   0.0    6.4e-07   29.3   0.0    1.7  1  PF07724.9  AAA domain (Cdc48 subfamily)
    5.6e-06   26.3   0.0    5.4e-05   23.2   0.0    2.4  1  PF13401.1  AAA domain
    6.2e-06   26.5   0.2    5.5e-05   23.4   0.0    2.5  2  PF13191.1  AAA ATPase domain
    0.00027   21.6   1.3    0.00041   21.0   0.1    2.0  1  PF13207.1  AAA domain
    0.00038   20.2   0.0     0.0063   16.2   0.0    2.5  2  PF13173.1  AAA domain
    0.00053   19.5   0.2     0.0017   17.9   0.1    1.8  1  PF13245.1  Part of AAA domain
     0.0011   18.7   0.1     0.0029   17.3   0.0    1.8  1  PF13671.1  AAA domain
     0.0011   17.9   0.1     0.0047   15.8   0.0    2.0  2  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
     0.0035   16.9   1.0       0.12   11.9   0.0    2.8  3  PF01637.13 Archaeal ATPase
     0.0076   16.4   0.1     0.0076   16.4   0.1    2.5  2  PF13238.1  AAA domain
     0.0092   15.3   0.1      0.017   14.4   0.1    1.3  1  PF01695.12 IstB-like ATP binding protein
  ------ inclusion threshold ------
      0.023   13.7   0.8        0.2   10.6   0.0    2.3  2  PF06414.7  Zeta toxin
      0.025   13.6   0.1      0.051   12.6   0.1    1.5  1  PF01078.16 Magnesium chelatase, subunit ChlI
      0.027   13.9   0.0      0.053   13.0   0.0    1.5  1  PF07931.7  Chloramphenicol phosphotransferase-like protein
      0.048   12.7   0.0      0.097   11.7   0.0    1.4  1  PF02562.11 PhoH-like protein
      0.059   12.8   3.5        1.3    8.4   0.0    2.3  2  PF13086.1  AAA domain
       0.09   12.0   0.3       0.36   10.0   0.1    2.0  2  PF13481.1  AAA domain
       0.11   11.9   0.0       0.31   10.5   0.0    1.7  1  PF07726.6  ATPase family associated with various cellular activities (AAA)
       0.14   12.2   0.0       0.53   10.3   0.0    2.0  2  PF00910.17 RNA helicase
       0.14   11.8   0.0       0.26   11.0   0.0    1.4  1  PF06309.6  Torsin
       0.88    9.4   7.2        1.9    8.3   5.0    1.5  1  PF14282.1  FlxA-like protein
        2.2    7.2   6.2       0.31    9.9   0.0    2.5  3  PF06745.8  KaiC


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.7   0.0   1.4e-41   8.2e-39       1     131 [.     229     367 ..     229     368 .. 0.95

  Alignments for each domain:
  == domain 1    score: 132.7 bits;  conditional E-value: 1.4e-41
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS....-S.EEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakeka....kp.silfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 +ll+GppGtGKTlla+a ak++++ fl++ g++l+++++g+++k +r+ f+ akek     k   i+fiDE+da++++r   ++s ++e +r++ +Ll++ldg++++ +++ vi+atnrpd ldpallr gR+drkie++
   MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKIkdrgKGgAIIFIDELDAIGTKRfggEQSGDREVQRTMLELLSQLDGFSSN-DNIKVIAATNRPDVLDPALLRsGRLDRKIELP 367
                 69***************************************************99989999445****************98888999999***************7.55***************************986 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.8   2.2e+03      36      61 ..      40      65 ..      38     117 .. 0.74
   2 !   30.1   0.0   5.3e-10     3e-07       2     137 ..     229     356 ..     228     357 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 3.8
               --HHHH---B--.........----- CS
  PF07728.9 36 tteedlkgrreiangttslvdsplvr 61
               ++++d+ +r++  +++ ++ +s+++r
  MMETSP1325-20131115|654_1 40 MSSDDIRQRTRHIEEEIRYMNSEIKR 65
               67777777777666666666666664 PP

  == domain 2    score: 30.1 bits;  conditional E-value: 5.3e-10
                EEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------G-SEEEEESGGG--.-HHHHHHHHHHHSSEEE..----EEE---.......-EEEEE-SS--.-TT-TTHHHHT CS
  PF07728.9   2 vlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraaregeilvlDEverae.sevlnsLlslleerrlllpeggelvkaknddlleknfrviatanpldrslnelspalrs 137
                +lL GppGtgK+ la+  a+ + + ++  +++ ++ +  +  + ++  +  +l + ++++ ++ g+i+++DE++ +  +   ++     e +r  l+ + +l +++++d    n+ via++n++d     l+pal++
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDAIFLKLAGP-QLVQMFIGDGAKLVRDAFELAKEKIKDRGKGGAIIFIDELDAIGtKRFGGEQSGDREVQRTMLELLSQLDGFSSND----NIKVIAATNRPD----VLDPALLR 356
                89***************999987766655555.57788888888888******************************77777899999999999999999999999987....9***********....99999876 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   1.1e-09   6.4e-07       6     103 ..     229     326 ..     224     345 .. 0.85

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 1.1e-09
                EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--.-EEEETGGG----------------HHHHHHHH CS
  PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG.ivllDEidKihpkessgadvSregVqrdLLqil 103
                ill gp g+Gkt+la+a a++ ++    kl+     ++  ++ ++ + + ++ a++ ++ + +gG i+++DE+d i  k+  g++    +Vqr +L +l
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDA-IFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKIKDRGKGGaIIFIDELDAIGTKRFGGEQSGDREVQRTMLELL 326
                899*******************94.5556666666666667777777799999999999999999*************88888888889*******998 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   9.5e-08   5.4e-05       7     119 ..     229     340 ..     224     349 .. 0.74

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 9.5e-08
  PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapastspkellqkllsalglpakgrltteellealqealrrrrt..rlliiDEaqrL.........s......eealeelrslldd...etgvkl 119
                ++++G++G+GKT+l+r  a+          +++++f  ++ +     l q++ +            ++ +e   e++++r++   ++ iDE++ +         s       ++le+l+ l d      ++k+
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAK----------HTDAIFLKLAGPQ----LVQMFIGDGAK------LVRDAFELAKEKIKDRGKggAIIFIDELDAIgtkrfggeqSgdrevqRTMLELLSQL-DGfssNDNIKV 340
                799*****************..........99**********9....44444444433......2345788999999999999999********988777666515566667777777555.32344555555 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       9.6   5.5e+03      80     115 ..      35      70 ..      25     124 .. 0.62
   2 !   23.4   0.0   9.6e-08   5.5e-05      14      58 ..     216     256 ..     198     341 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 9.6
  PF13191.1  80 rqlltelaaelggwreallaalgalipelegiiglq 115
                +++   + + ++++++++++ +    +e+ +i++++
  MMETSP1325-20131115|654_1  35 EEIMAMSSDDIRQRTRHIEEEIRYMNSEIKRIQHES 70 
                555555566666666666666666333333333333 PP

  == domain 2    score: 23.4 bits;  conditional E-value: 9.6e-08
  PF13191.1  14 aalrrvsegsp.lllvtGpsGiGKSsLlrelakpillerlrfaagk 58 
                ++++++    p  +l++Gp+G+GK+ L+r+     ++++   +  k
  MMETSP1325-20131115|654_1 216 DMFDAIGIKPPkGILLHGPPGTGKTLLARA-----CAKHTDAIFLK 256
                6667666667789*****************.....87766655544 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.1   7.2e-07   0.00041       2      46 ..     229     278 ..     229     399 .. 0.59

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 7.2e-07
                E--B--TT---HHHHHHHHHHSTEEEEEGGG..B-...-GGGS-B----- CS
  PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd..ll...reeglkelddge 46 
                i+++GppG+GK+ la++ a++ + + l l    l+   + +g k ++d +
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDAIFLKLAGpqLVqmfIGDGAKLVRDAF 278
                899******************99777766664322344333333222222 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.47   2.7e+02      74     119 ..     136     183 ..      31     192 .. 0.54
   2 !   16.2   0.0   1.1e-05    0.0063       4      73 ..     228     303 ..     225     358 .. 0.68

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.47
  PF13173.1  74 pewedalkslvd.dg.rnldviltGsnskllskeiatslagrveeiel 119
                ++++  + +lvd ++ +++d++ t   s+l+ +++ +++  rv+ +e+
  MMETSP1325-20131115|654_1 136 QTIYLPIPGLVDvETlEPGDLVGTNKDSYLILEKLPSEFDSRVKAMEV 183
                455555666666422566777777777777777777777777777666 PP

  == domain 2    score: 16.2 bits;  conditional E-value: 1.1e-05
  PF13173.1   4 ilvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe.......llelfleklke...kkkylflDEiqev 73 
                 +++ Gp ++GKt l++  ak+       ++++l  ++l ++   +         el  ek+k+   +  ++f+DE   +
  MMETSP1325-20131115|654_1 228 GILLHGPPGTGKTLLARACAKHTD----AIFLKLAGPQLVQMFIGDgaklvrdAFELAKEKIKDrgkGGAIIFIDELDAI 303
                5899************99997776....9999999999955443323332221224444443336678899*****9877 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   2.9e-06    0.0017      10      34 ..     227     249 ..     219     261 .. 0.77

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 2.9e-06
  PF13245.1  10 npllvvtGgPGtGKTttlaaiiaal 34 
                 ++l+  G+PGtGKT +la++ a +
  MMETSP1325-20131115|654_1 227 KGILL-HGPPGTGKT-LLARACAKH 249
                55555.*********.888777764 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   5.1e-06    0.0029       2      28 ..     229     255 ..     229     287 .. 0.92

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 5.1e-06
  PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrl 28 
                +ll+G+pG+GK+ la++ +k++++++l
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDAIFL 255
                689****************99888776 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   8.2e-06    0.0047      53      88 ..     229     264 ..     223     304 .. 0.88
   2 ?   -1.8   0.0         2   1.2e+03      39     167 ..     339     355 ..     315     401 .. 0.57

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 8.2e-06
  PF05496.7  53 vllyGpPGlGkttlakiiakelgvelkvtsgPvlek 88 
                +ll+GpPG Gkt la+  ak  ++ +   +gP l +
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDAIFLKLAGPQLVQ 264
                8***********************999999998865 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 2
  PF05496.7  39 fieaakkreealdhvllyGpPGlGkttlakiiakelgvelkvtsgPvlekagdlaalltnleekdvlfideihrlsraveevlysamedfkldivigkGpsarsvkldlpkftlvgattraglltsPlr 167
                                                                                                                                 +++at r  +l   l 
  MMETSP1325-20131115|654_1 339 K----------------------------------------------------------------------------------------------------------------VIAATNRPDVLDPALL 355
                3................................................................................................................4455555555544332 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       2.2   1.2e+03      81     104 ..      55      82 ..      26     101 .. 0.53
   2 ?    2.6   0.0      0.14        82      23      44 ..     229     250 ..     220     255 .. 0.83
   3 !   11.9   0.0   0.00021      0.12      86     133 ..     257     307 ..     247     345 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 2.2
                 HH...HHHHT....-----.TS-GG.G- CS
  PF01637.13  81 al...gialpkaeleeilk.kksklvfl 104
                 ++   +++++++++e+ ++ +k k   +
   MMETSP1325-20131115|654_1  55 EIrymNSEIKRIQHESASQkEKIKENNE 82 
                 3233355555555544444422222222 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.14
                 EEEE--TT---HHHHHHHHHH- CS
  PF01637.13  23 iviyGprrsGKTaLlkeileel 44 
                 i++ Gp ++GKT L +  ++ +
   MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHT 250
                 7899*********999887765 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 0.00021
                 HT....-----.TS-GG.G--HHHHHHHHHH----.EEEEEETGGGGG.-- CS
  PF01637.13  86 lpkaeleeilk.kksklvflaleellealkkkgkk.iiiiiDElqkli.lg 133
                 l  ++l +++  +  klv  a+e ++e++k++gk   ii iDEl  ++   
   MMETSP1325-20131115|654_1 257 LAGPQLVQMFIgDGAKLVRDAFELAKEKIKDRGKGgAIIFIDELDAIGtKR 307
                 445555566666889999**************************9998443 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   1.0         7     4e+03      31      31 ..      57      57 ..      19     111 .. 0.56
   2 !   16.4   0.1   1.3e-05    0.0076       1      29 [.     229     265 ..     229     396 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 7
  PF13238.1 31 k 31
                
  MMETSP1325-20131115|654_1 57 R 57
               1 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 1.3e-05
  PF13238.1   1 IlitGtpGvGKtTlakeLaerl........gdvlrdl 29 
                Il+ G+pG+GKt la++ a+++        g  l ++
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTdaiflklaGPQLVQM 265
                89******************98666666663333333 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1     3e-05     0.017      48      69 ..     227     248 ..     217     259 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 3e-05
  PF01695.12  48 enlvllGpsGvGKthlAialgv 69 
                 + ++l Gp+G+GKt lA a + 
   MMETSP1325-20131115|654_1 227 KGILLHGPPGTGKTLLARACAK 248
                 6799*************98764 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1       0.3   1.7e+02     135     179 ..      41      88 ..      30     114 .. 0.63
   2 ?   10.6   0.0   0.00035       0.2      15      42 ..     225     251 ..     218     267 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.3
  PF06414.7 135 SelgilqRyeeelaekgegRrvpkevhdeay......eglpesvealeaek 179
                S   i+qR +   +e    R++++e    ++      e+++e++e+++ +k
  MMETSP1325-20131115|654_1  41 SSDDIRQRTRHIEEE---IRYMNSEIKRIQHesasqkEKIKENNEKIKLNK 88 
                444555555555333...566666666655544445555566666666555 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00035
  PF06414.7  15 kpkavllgGqpGAGKtslaellleelaa 42 
                 pk +ll G+pG GKt la++  + + +
  MMETSP1325-20131115|654_1 225 PPKGILLHGPPGTGKTLLARACAKHT-D 251
                5999****************998876.4 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1     9e-05     0.051      25      42 ..     229     246 ..     220     253 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 9e-05
  PF01078.16  25 lllvGppGsGKtmlakrl 42 
                 +ll GppG+GKt+la++ 
   MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARAC 246
                 89*************975 PP

>> PF07931.7  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   9.4e-05     0.053       4      41 ..     229     266 ..     227     307 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 9.4e-05
                EEE-----------HHHHHHHSSS-EEEE--HHHHHHS CS
  PF07931.7   4 ilLnGgsssGKsslaralqevldepwlhlgvDafveal 41 
                ilL+G + +GK+ lara  + +d+ +l+l+  ++v++ 
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDAIFLKLAGPQLVQMF 266
                9****************************999998874 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00017     0.097      20      40 ..     227     247 ..     210     252 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00017
  PF02562.11  20 divfaiGpaGtGKTylavala 40 
                 + ++++Gp GtGKT+la a+a
   MMETSP1325-20131115|654_1 227 KGILLHGPPGTGKTLLARACA 247
                 567899***********9998 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.6     0.059        33     123     166 ..      43      82 ..      16     135 .. 0.59
   2 ?    8.4   0.0    0.0023       1.3      20      33 ..     229     242 ..     219     258 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.059
  PF13086.1 123 keiseeleelkeklekekkklkqekeklkkeskklkkeleeare 166
                ++i+++++ ++e++    + +++e + ++ es + k++++e++e
  MMETSP1325-20131115|654_1  43 DDIRQRTRHIEEEI----RYMNSEIKRIQHESASQKEKIKENNE 82 
                22222222222222....22222222222222222222222222 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0023
  PF13086.1  20 tliqGpPgtGKttt 33 
                 l++GpPgtGKt  
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLL 242
                599*********43 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00063      0.36      36      57 ..     229     250 ..     215     288 .. 0.86
   2 ?   -0.7   0.0       1.3   7.1e+02     120     166 ..     268     320 ..     244     343 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00063
  PF13481.1  36 tllaGapgtGKStlalqlaaav 57 
                +ll G+pgtGK+ la ++a + 
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHT 250
                799************9999876 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1.3
  PF13481.1 120 drrdalltadlerllaaieeleg.pdlvviDtlsrlvgg....densnsdv.g 166
                +++++l+ +++e   + i+++ +  +++ iD l+++       ++ ++++v +
  MMETSP1325-20131115|654_1 268 GDGAKLVRDAFELAKEKIKDRGKgGAIIFIDELDAIGTKrfggEQSGDREVqR 320
                45566667777777788888644599999999988654444435555555432 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00054      0.31       2      28 ..     229     255 ..     228     268 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00054
  PF07726.6   2 vllegvPGlaktllvkalakaldlefk 28 
                +ll+g PG++ktll++a ak+ d+ f 
  MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAKHTDAIFL 255
                79******************9998775 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       8.3   4.7e+03      72      99 ..      35      62 ..      27      76 .. 0.62
   2 ?   10.3   0.0   0.00093      0.53       1      20 [.     229     248 ..     229     284 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 8.3
  PF00910.17 72 elirlvsstpyplnmasleekgtlftSk 99
                e i ++ss  ++  + ++ee  + ++S+
   MMETSP1325-20131115|654_1 35 EEIMAMSSDDIRQRTRHIEEEIRYMNSE 62
                5555556666666666666555555554 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00093
  PF00910.17   1 iwlyGpsgeGKStlakeLak 20 
                 i+l+Gp+g+GK++la+  ak
   MMETSP1325-20131115|654_1 229 ILLHGPPGTGKTLLARACAK 248
                 689************99433 PP

>> PF06309.6  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00046      0.26      51      93 ..     224     269 ..     199     291 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00046
  PF06309.6  51 kkpLvlsfhGwtGtGknfvaeiiaen...lyrdGlrsdyvkkfvat 93 
                k p  + +hG +GtGk  +a+  a++   ++ +    + v++f++ 
  MMETSP1325-20131115|654_1 224 KPPKGILLHGPPGTGKTLLARACAKHtdaIFLKLAGPQLVQMFIGD 269
                44567889*************9986522268888888889998876 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.0    0.0034       1.9      42      86 ..      38      82 ..      28      90 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0034
  PF14282.1 42 eeltaeekqkqqqliqqQIqalqaQiaqlqsqqseeaqqsqessv 86
                +++ ++  ++   i+++I  ++++i+++q + ++++++ +e++ 
  MMETSP1325-20131115|654_1 38 MAMSSDDIRQRTRHIEEEIRYMNSEIKRIQHESASQKEKIKENNE 82
               4678888889999***********************888777665 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.6       1.5   8.6e+02      75     116 ..      31      68 ..      20      90 .. 0.53
   2 ?    9.9   0.0   0.00055      0.31      14      37 ..     221     244 ..     193     249 .. 0.86
   3 ?   -3.8   0.0       8.5   4.8e+03     192     210 ..     375     392 ..     370     428 .. 0.60

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 1.5
  PF06745.8  75 ekleeegklaiidasesaeeeaeedleelieklaeaikeika 116
                e+l ee    i+ +s++++++ +  +ee i+ +++ ik+i+ 
  MMETSP1325-20131115|654_1  31 EELDEE----IMAMSSDDIRQRTRHIEEEIRYMNSEIKRIQH 68 
                555555....33344444443344444444444444444433 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00055
  PF06745.8  14 gGipegrvvlitGepGtGKtifal 37 
                 Gi   + +l+ G pGtGKt++a 
  MMETSP1325-20131115|654_1 221 IGIKPPKGILLHGPPGTGKTLLAR 244
                38888899*************985 PP

  == domain 3    score: -3.8 bits;  conditional E-value: 8.5
  PF06745.8 192 vRtleivkmRgtkhskkvh 210
                 R++ei   R+ +++k+ +
  MMETSP1325-20131115|654_1 375 ARIMEIH-SRKMNVDKEDV 392
                3444443.23333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1083  (0.079213); expected 273.4 (0.02)
Passed bias filter:                      595  (0.0435196); expected 273.4 (0.02)
Passed Vit filter:                       120  (0.00877706); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 1.05u 0.40s 00:00:01.45 Elapsed: 00:00:00.82
# Mc/sec: 1320.92
//
Query:       MMETSP1325-20131115|658_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.79
# Mc/sec: 260.87
//
Query:       MMETSP1325-20131115|659_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.25s 00:00:00.52 Elapsed: 00:00:00.62
# Mc/sec: 158.47
//
Query:       MMETSP1325-20131115|657_1  [L=552]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (552 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.86u 0.34s 00:00:01.20 Elapsed: 00:00:00.97
# Mc/sec: 1363.70
//
Query:       MMETSP1325-20131115|661_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 1094.19
//
Query:       MMETSP1325-20131115|653_1  [L=522]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-39  132.9   0.0    1.3e-38  132.4   0.0    1.1  1  PF00069.20 Protein kinase domain
    5.1e-18   65.0   0.0    6.6e-18   64.6   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    4.3e-05   23.2   0.0     0.0012   18.5   0.0    2.5  2  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.076   11.6   0.1       0.11   11.0   0.0    1.2  1  PF05445.6  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.4   0.0   3.9e-42   1.3e-38       1     252 [.      49     307 ..      49     316 .. 0.90

  Alignments for each domain:
  == domain 1    score: 132.4 bits;  conditional E-value: 3.9e-42
                 EEEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEE.STEEEEEEE--SC-..EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEE...TT--EEE------EEE.......CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH.HHHHHHHHHHT-SSGGGS--HH CS
  PF00069.20   1 yelleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfee.kdelylvleyvegg..dlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLld...kkgelkiaDFGlakkl.......eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks.eelkdlikkllekdpakRltae 252
                 y+l++k+GsGsfG +y +++ +tg++vA+K  + ++++ +  +    E ki++ l+    +  ++++    d+ ++vl+++  +  dlf++    ++++ +++ ++a q+l+ ley+H +++iHrD+Kp+N+L+    ++++++i+DFGlakk+       + +++++++l+gt +Y++ +    + e++++ D+ slG++l+ ++ g+lp++g + +++++++e+i+++k++ + ++ ++   +e+++  + +     ++R+  +
   MMETSP1325-20131115|653_1  49 YRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESVKTKHPQLLY----ESKIYRILHGGLGIPNVRWYGVeGDYNVMVLDLLGPSleDLFNYC--GRRFKLKTVLMVADQLLSRLEYVHTKSFIHRDVKPDNFLIGlgkRQNVIHIIDFGLAKKYrdprshqHIPYRENKNLTGTARYASINTHI-GIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGFpSEFRSYFEYCRSLRFEDRPDYA 307
                 7899**************************9999999887754....9*******99999999999987478888******88555555555..599*************************************765466777****************999999*******************.**************************************************9999886559999999999999999998765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.0   1.9e-21   6.6e-18       3     257 ..      51     311 ..      49     313 .. 0.81

  Alignments for each domain:
  == domain 1    score: 64.6 bits;  conditional E-value: 1.9e-21
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT.-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...TTEEEE-----CEES.....TTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTS...HHHHHHHHH.HTT-BS---TTS...BHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee...ekvvkisDfGLardi.....ekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypgl...sneevlell.kegkrlekpekc...peelyelmkqCweeepeeRptfkelve 257
                 lg+k+G+G+fG+++ gt      ++  +Va+K  + ++++    ++l e ki++ l     i ++  + ++++  ++v++++   +L+++ +    ++++lk++l +a q+ + +ey ++k+++Hrd+   N L+     ++v+ i DfGLa++      +++  y+++++ +   ++ ++ +    + + + D  s G +l+  +  g+ p++gl   ++++ +e++ +++   ++ + c   p+e+ +  + C + + e+Rp+ + l +
   MMETSP1325-20131115|653_1  51 LGRKIGSGSFGDIYLGTNM----TTGEEVAIKLESVKTKH---PQLLYESKIYRILhGGLGIPNVRWYGVEGDYNVMVLDLLG-PSLEDLFNYC-GRRFKLKTVLMVADQLLSRLEYVHTKSFIHRDVKPDNFLIGLgkrQNVIHIIDFGLAKKYrdprsHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIR-GSLPWQGLkanTKKQKYERImDRKMSTSTEQLCkgfPSEFRSYFEYCRSLRFEDRPDYAYLKR 311
                 789**************99....8999*****98555555...5899*****9999666778777777777788899999984.5788888887.999*************************************7433388***********9966543333445888888999************************99997766.99**999942233445666623333344444443338999****************9988765 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.042   1.4e+02       6      69 ..      56     120 ..      52     129 .. 0.70
   2 !   18.5   0.0   3.4e-07    0.0012     152     196 ..     148     194 ..     124     196 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.042
                 E--SSEEEEEEEETT...TEEEEEESSCCHHHHHHHHHHHHHHHCCSSSB--BEEE..E-CSSCSC CS
  PF01636.18   6 sgGasnrtyrvttga.g.ryvlrrarparaaeelrrevallrlLakagipvPevlagdtdddvlgl 69 
                 ++G   + y+ t  + g +++ ++ + +  +++l  e +++r L++    +P v +++  +d + +
   MMETSP1325-20131115|653_1  56 GSGSFGDIYLGTNMTtGeEVAIKLESVKTKHPQLLYESKIYRILHGGLG-IPNVRWYGVEGDYNVM 120
                 5555555555554443347888888888889999999999999996655.6999998877776655 PP

  == domain 2    score: 18.5 bits;  conditional E-value: 3.4e-07
                 HHHHHHHHHHCSS--EEB-SS-SGGGEEEE..TTTTEEEE---TT-B CS
  PF01636.18 152 vlaalaallpgaeppvllHgDlhpgNllvd..pddgrvgviDfedag 196
                 v+++l+++l     ++++H+D +p+N l+   ++++++ +iDf++a 
   MMETSP1325-20131115|653_1 148 VADQLLSRLEYVHTKSFIHRDVKPDNFLIGlgKRQNVIHIIDFGLAK 194
                 444444444444569****************8888888******985 PP

>> PF05445.6  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.3e-05      0.11     290     322 ..     154     186 ..     135     194 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.3e-05
  PF05445.6 290 kiyelkdctnFlHvDlkPdniLvFdskeelvik 322
                   e    + F+H D+kPdn L+   k++ vi+
  MMETSP1325-20131115|653_1 154 SRLEYVHTKSFIHRDVKPDNFLIGLGKRQNVIH 186
                4456677899************97666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       448  (0.0327677); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.87u 0.39s 00:00:01.26 Elapsed: 00:00:00.86
# Mc/sec: 1454.53
//
Query:       MMETSP1325-20131115|664_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.61
# Mc/sec: 208.21
//
Query:       MMETSP1325-20131115|665_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.4    8.1  11.5        4.7    6.5   8.0    1.9  1  PF04886.7 PT repeat


Domain annotation for each model (and alignments):
>> PF04886.7  PT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   8.0   0.00034       4.7       5      35 ..      36      66 ..      29      67 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00034
  PF04886.7  5 qPteqPTvqPTgqPtaqPTdqPtaqPtdaPt 35
               +P+  PT  P    +  PT+ Pt  Pt+aP+
  MMETSP1325-20131115|665_1 36 APSVLPTSSPVPTISISPTADPTRTPTQAPV 66
               5788888888888888999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.91
# Mc/sec: 463.47
//
Query:       MMETSP1325-20131115|663_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-26   92.9   0.0    1.4e-18   66.7   0.0    2.1  2  PF00227.21 Proteasome subunit


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.1e-09   1.5e-05      32      73 ..       4      44 ..       1      47 [. 0.86
   2 !   66.7   0.0     1e-22   1.4e-18      89     190 .]     136     234 ..     128     234 .. 0.90

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 1.1e-09
                ESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHH CS
  PF00227.21 32 skstveKifkiddhigmafaGlaaDartlverarseaqlyrl 73
                +++ +eKi+++ d+i+++ aG+aaDa+ l+  + s+++  +l
   MMETSP1325-20131115|663_1  4 DTR-CEKIHRLADRIFCCGAGTAADAEHLTMAVASHLRAMQL 44
                445.9************************9999998876665 PP

  == domain 2    score: 66.7 bits;  conditional E-value: 1e-22
                 HHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEEE CS
  PF00227.21  89 aallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknvevavi 190
                  all +++++s  + + ++l+++gvd eg p+l q+ p+Gs+  + ++ a+Gsg+ aa ++le ++++dl+l++a+e+a++a+ + + +d  sg+ v+v+v+
   MMETSP1325-20131115|663_1 136 HALLKRHLYKS-GGRCQCALVLGGVDSEG-PHLWQLHPHGSSETV-PFSAMGSGQMAALSVLETKWRPDLDLNSAKEVARQAIASGISNDLGSGSCVDVCVV 234
                 44555555555.7789**********887.***************.7****************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.57
# Mc/sec: 1284.94
//
Query:       MMETSP1325-20131115|667_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-46  155.8  15.2    5.9e-16   58.4   0.7    3.9  4  PF12796.2  Ankyrin repeats (3 copies)
    2.8e-33  111.9   8.2    1.8e-06   27.3   0.6    6.3  6  PF00023.25 Ankyrin repeat
      2e-29  101.3   6.6    1.1e-08   35.2   0.0    5.2  5  PF13637.1  Ankyrin repeats (many copies)
    4.6e-26   90.1  12.4    1.5e-10   40.8   0.1    5.0  5  PF13857.1  Ankyrin repeats (many copies)
    1.3e-25   86.7   4.3    2.3e-05   24.0   0.1    5.9  5  PF13606.1  Ankyrin repeat
     0.0061   16.1   0.0      0.019   14.5   0.0    1.8  1  PF14085.1  Domain of unknown function (DUF4265)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.3   1.3e-08   2.9e-05      18      81 ..      66     131 ..      25     140 .. 0.81
   2 !   54.3   0.3   4.8e-18   1.1e-14      12      88 ..     142     217 ..     135     218 .. 0.88
   3 !   58.4   0.7   2.6e-19   5.9e-16       1      71 [.     159     233 ..     159     238 .. 0.91
   4 !   49.4   0.0   1.7e-16   3.8e-13       5      78 ..     235     312 ..     231     318 .. 0.92

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 1.3e-08
  PF12796.2  18 ekgadvdlget..pLhlAaeagnleivklLleagadvnakd..kegntpLhlAvrnghlelvklLlek 81 
                +k+  v+  +   +L++ a+ g+ + +k  leag ++n  +  + g+t+Lh A+ ++++ +++lLl+k
  MMETSP1325-20131115|667_1  66 AKNQAVN--DAnlALFARADDGDAAGLKRALEAGGNPNWFNmkEAGQTALHRACLKRNIACIDLLLQK 131
                3344444..225699999999999**********9997666669**********************98 PP

  == domain 2    score: 54.3 bits;  conditional E-value: 4.8e-18
  PF12796.2  12 lvklLlekgadvdlgetpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                ++ + ++ ++ ++  +tpLh+Aa++gnl  ++ Ll+ ga+vn+ ++ gn pLh A+ ++h+ +v+ L+++ga ++ +
  MMETSP1325-20131115|667_1 142 VISTVVDIKDRIH-ENTPLHIAAAQGNLRLLNQLLDLGAQVNTPNNLGNVPLHTAAVSNHVGCVRELIKRGAVISET 217
                5556666666666.899*******************************************************98876 PP

  == domain 3    score: 58.4 bits;  conditional E-value: 2.6e-19
  PF12796.2   1 LhlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrngh 71 
                Lh+Aa +gnl l+++Ll+ ga v++    g+ pLh Aa ++++ +v+ L+++ga + +++k+g t+Lh+Av   h
  MMETSP1325-20131115|667_1 159 LHIAAAQGNLRLLNQLLDLGAQVNTpnnlGNVPLHTAAVSNHVGCVRELIKRGAVISETNKRGSTALHFAVYGLH 233
                8***********************96665555**************************************97655 PP

  == domain 4    score: 49.4 bits;  conditional E-value: 1.7e-16
  PF12796.2   5 aengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklL 78 
                a  ++ ++v lLl++g+ vd+    g t+Lh+Aa++g  ++++ Lle gadv  +d++g+ +L++A ++g  e++ lL
  MMETSP1325-20131115|667_1 235 AAAESTQIVSLLLQEGCGVDVadrtGTTALHVAASHGFCKVASTLLEFGADVGLEDQNGRDALYYAESKGFSEMLFLL 312
                566799**************99999999*****************************************999988666 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   7.7e-07    0.0018       2      23 ..     109     130 ..     108     135 .. 0.94
   2 !   27.3   0.6     8e-10   1.8e-06       2      33 .]     155     186 ..     154     186 .. 0.94
   3 !   23.9   0.0   9.4e-09   2.1e-05       2      32 ..     188     218 ..     187     219 .. 0.92
   4 !   17.6   0.0   9.4e-07    0.0021       2      31 ..     221     256 ..     220     259 .. 0.84
   5 !   24.1   0.0   8.4e-09   1.9e-05       2      32 ..     260     290 ..     259     291 .. 0.93
   6 ?   -0.5   0.0      0.51   1.2e+03       1      18 [.     292     331 ..     292     333 .. 0.65

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 7.7e-07
                 SCBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLls 23 
                 G+T+LH A+l+ n+ ++ lLl+
   MMETSP1325-20131115|667_1 109 GQTALHRACLKRNIACIDLLLQ 130
                 9********************9 PP

  == domain 2    score: 27.3 bits;  conditional E-value: 8e-10
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                  +TPLH+Aa  gnl+ +  Ll+ GA +n  ++
   MMETSP1325-20131115|667_1 155 ENTPLHIAAAQGNLRLLNQLLDLGAQVNTPNN 186
                 59**************************8886 PP

  == domain 3    score: 23.9 bits;  conditional E-value: 9.4e-09
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G+ PLH Aa ++++ +v+ L+++GA +  ++
   MMETSP1325-20131115|667_1 188 GNVPLHTAAVSNHVGCVRELIKRGAVISETN 218
                 899**********************988766 PP

  == domain 4    score: 17.6 bits;  conditional E-value: 9.4e-07
                 SCBHHHHHHHTT......HHHHHHHHHH..TTSSTTHB CS
  PF00023.25   2 GfTPLHlAalrg......nlevvklLls..qGAdlnaq 31 
                 G T+LH A++        ++++v+lLl+  +G d+   
   MMETSP1325-20131115|667_1 221 GSTALHFAVYGLhsaaaeSTQIVSLLLQegCGVDV--A 256
                 89**************************5555554..4 PP

  == domain 5    score: 24.1 bits;  conditional E-value: 8.4e-09
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G T+LH+Aa++g  +v++ Ll+ GAd+ + d
   MMETSP1325-20131115|667_1 260 GTTALHVAASHGFCKVASTLLEFGADVGLED 290
                 89************************98765 PP

  == domain 6    score: -0.5 bits;  conditional E-value: 0.51
                 TSCBHHHHHHHTT......................HHHHH CS
  PF00023.25   1 dGfTPLHlAalrg......................nlevv 18 
                 +G+ +L +A ++g                      + +v+
   MMETSP1325-20131115|667_1 292 NGRDALYYAESKGfsemlfllnsvpreekqkpkkfHXNVI 331
                 6888999999999666666666666666666666666666 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.3     8e-08   0.00018       3      54 .]      76     129 ..      74     129 .. 0.90
   2 !   33.9   0.2   1.2e-11   2.8e-08       2      46 ..     156     200 ..     155     201 .. 0.93
   3 !   35.2   0.0   4.8e-12   1.1e-08       4      53 ..     191     246 ..     191     247 .. 0.86
   4 !   17.8   0.0   1.3e-06    0.0031       6      54 .]     233     280 ..     232     280 .. 0.77
   5 !    6.0   0.0    0.0071        16      16      53 ..     275     312 ..     274     312 .. 0.88

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 8e-08
  PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtd..esGntaLhiAalrgnieilklLl 54 
                 aL+ +a +g+   +k  le g ++n  +  e G taLh+A+l+ ni ++ lLl
  MMETSP1325-20131115|667_1  76 LALFARADDGDAAGLKRALEAGGNPNWFNmkEAGQTALHRACLKRNIACIDLLL 129
                58999999999999*******988888866699*******************97 PP

  == domain 2    score: 33.9 bits;  conditional E-value: 1.2e-11
  PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgn 46 
                +t+Lh aa++g+l+l++ Ll+ g+++n  ++ Gn +Lh Aa  ++
  MMETSP1325-20131115|667_1 156 NTPLHIAAAQGNLRLLNQLLDLGAQVNTPNNLGNVPLHTAAVSNH 200
                89*************************************996665 PP

  == domain 3    score: 35.2 bits;  conditional E-value: 4.8e-12
  PF13637.1   4 aLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgn......ieilklL 53 
                +Lh aa s+++ +v+ L+++g+ i  t+++G taLh+A+++ +       +i+ lL
  MMETSP1325-20131115|667_1 191 PLHTAAVSNHVGCVRELIKRGAVISETNKRGSTALHFAVYGLHsaaaesTQIVSLL 246
                79*************************************99984444446666665 PP

  == domain 4    score: 17.8 bits;  conditional E-value: 1.3e-06
  PF13637.1   6 hyaaisgrlelvklLlek..gidinrtdesGntaLhiAalrgnieilklLl 54 
                h aa +  +++v lLl+   g+d+   d+ G+taLh+Aa++g+ +++  Ll
  MMETSP1325-20131115|667_1 233 HSAA-AESTQIVSLLLQEgcGVDVA--DRTGTTALHVAASHGFCKVASTLL 280
                5554.689999*****882446644..559************998887665 PP

  == domain 5    score: 6.0 bits;  conditional E-value: 0.0071
  PF13637.1  16 lvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                ++  Lle+g+d+   d +G+ aL++A ++g+ e+l lL
  MMETSP1325-20131115|667_1 275 VASTLLEFGADVGLEDQNGRDALYYAESKGFSEMLFLL 312
                56789******988899*********999999999776 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       1.3   2.9e+03      17      49 ..      59      85 ..      48      88 .. 0.74
   2 !   10.9   0.1   0.00017      0.38      14      37 ..     107     130 ..      94     149 .. 0.81
   3 !   21.6   0.2   7.1e-08   0.00016      13      48 ..     152     187 ..     144     188 .. 0.88
   4 !   40.8   0.1   6.6e-14   1.5e-10       1      56 []     174     228 ..     174     228 .. 0.98
   5 !   31.1   0.1   7.5e-11   1.7e-07       1      56 []     246     300 ..     246     300 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.3
  PF13857.1 17 ntpLhlAakggalevvrlLlapgadlnlrdsdg 49
               ntp h+ ak++a++ + l l       +r  dg
  MMETSP1325-20131115|667_1 59 NTPRHNLAKNQAVNDANLAL------FARADDG 85
               38889999999998888888......6666666 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00017
  PF13857.1  14 eggntpLhlAakggalevvrlLla 37 
                e+g+t+Lh A+ + +  +++lLl+
  MMETSP1325-20131115|667_1 107 EAGQTALHRACLKRNIACIDLLLQ 130
                5789*******************4 PP

  == domain 3    score: 21.6 bits;  conditional E-value: 7.1e-08
  PF13857.1  13 deggntpLhlAakggalevvrlLlapgadlnlrdsd 48 
                + + ntpLh+Aa +g+l ++  Ll+ ga  n+ ++ 
  MMETSP1325-20131115|667_1 152 RIHENTPLHIAAAQGNLRLLNQLLDLGAQVNTPNNL 187
                56677**************************99985 PP

  == domain 4    score: 40.8 bits;  conditional E-value: 6.6e-14
  PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                Ll+ g a+vn+ ++ gn pLh+Aa  +++ +vr+L+++ga +  ++++g tal++A
  MMETSP1325-20131115|667_1 174 LLDLG-AQVNTPNNLGNVPLHTAAVSNHVGCVRELIKRGAVISETNKRGSTALHFA 228
                89999.***********************************************998 PP

  == domain 5    score: 31.1 bits;  conditional E-value: 7.5e-11
  PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                Ll++g   v+  d++g+t+Lh+Aa++g   v+  Ll++gad +l d +g+ al +A
  MMETSP1325-20131115|667_1 246 LLQEG-CGVDVADRTGTTALHVAASHGFCKVASTLLEFGADVGLEDQNGRDALYYA 300
                78888.66677799999************************************998 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   3.6e-06    0.0081       2      24 ..     109     131 ..     108     135 .. 0.92
   2 !   24.0   0.1     1e-08   2.3e-05       2      30 .]     155     183 ..     154     183 .. 0.95
   3 !   12.3   0.0   6.1e-05      0.14       3      26 ..     189     212 ..     187     216 .. 0.90
   4 !    9.4   0.0   0.00054       1.2       2      28 ..     221     253 ..     220     256 .. 0.73
   5 !   21.0   0.0   9.9e-08   0.00023       2      28 ..     260     286 ..     259     288 .. 0.95

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.6e-06
  PF13606.1   2 GnTpLhlAasngrielveaLlen 24 
                G+T+Lh A+ +++i+ +++Ll++
  MMETSP1325-20131115|667_1 109 GQTALHRACLKRNIACIDLLLQK 131
                9********************86 PP

  == domain 2    score: 24.0 bits;  conditional E-value: 1e-08
  PF13606.1   2 GnTpLhlAasngrielveaLlengadina 30 
                 nTpLh+Aa +g++ l++ Ll+ ga++n+
  MMETSP1325-20131115|667_1 155 ENTPLHIAAAQGNLRLLNQLLDLGAQVNT 183
                59*************************96 PP

  == domain 3    score: 12.3 bits;  conditional E-value: 6.1e-05
  PF13606.1   3 nTpLhlAasngrielveaLlenga 26 
                n pLh+Aa ++++  v++L+++ga
  MMETSP1325-20131115|667_1 189 NVPLHTAAVSNHVGCVRELIKRGA 212
                559*******************98 PP

  == domain 4    score: 9.4 bits;  conditional E-value: 0.00054
  PF13606.1   2 GnTpLhlAas......ngrielveaLlengadi 28 
                G T+Lh A++        ++++v++Ll+ g+ +
  MMETSP1325-20131115|667_1 221 GSTALHFAVYglhsaaAESTQIVSLLLQEGCGV 253
                77********66532223699*******87644 PP

  == domain 5    score: 21.0 bits;  conditional E-value: 9.9e-08
  PF13606.1   2 GnTpLhlAasngrielveaLlengadi 28 
                G T+Lh+Aas+g +++++ Lle gad+
  MMETSP1325-20131115|667_1 260 GTTALHVAASHGFCKVASTLLEFGADV 286
                78************************8 PP

>> PF14085.1  Domain of unknown function (DUF4265)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   8.5e-06     0.019      57     112 ..     229     285 ..     205     289 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 8.5e-06
  PF14085.1  57 vvveekaealaekvreelealgctleglse.sllavdvpasvdleaieelLdeleeq 112
                v+  ++a+a+  ++ + l + gc +++ +  +  a+ v+as ++ +++  L e+ ++
  MMETSP1325-20131115|667_1 229 VYGLHSAAAESTQIVSLLLQEGCGVDVADRtGTTALHVAASHGFCKVASTLLEFGAD 285
                4444555578899**************************************997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.74u 0.37s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1647.50
//
Query:       MMETSP1325-20131115|670_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 282.43
//
Query:       MMETSP1325-20131115|662_1  [L=1006]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-80  270.3   0.2    7.5e-53  179.7   0.2    2.2  2  PF00850.14 Histone deacetylase domain


Domain annotation for each model (and alignments):
>> PF00850.14  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.7   0.2   5.5e-57   7.5e-53      11     217 ..      73     330 ..      61     344 .. 0.83
   2 !   88.3   0.0   3.6e-29   4.9e-25     210     305 ..     730     825 ..     701     826 .. 0.91

  Alignments for each domain:
  == domain 1    score: 179.7 bits;  conditional E-value: 5.5e-57
                 -TT-THHHHHHHHHHHH--...-GGGS---------HHHHHTTS-HHHHHHHHHHH...........................HS----...........................------------HHHHHH----HHHHHHHH--------B--S-------TT------SS-HHHHH---TTTT--..---EEEEE-SS------TTTTTT-TTEEEEEEEE.TT..SSS.T-.--TT---...-------EEEEEE------ CS
  PF00850.14  11 hpespeRlsavlsllkekg...lleelevikpreatkeelllvhspeYleqleela......................sekeeelallg...........................lesdtplspgsleaallaagavieavdlvlegevrkafvairppGHHAekdsasGFCllNnvaiaakyllkkhg..lkrvlivDfDvHhGnGtqeifysdpsvltlSlHd.yeeefyP.gt.gaadevg...egkgkgynlniplepgtsd 217
                  pe+p+R  a+++++++ g       ++++k+r+at++elllvhsp+ le + ++                                 g                             ++++++++++e al aag+++e++++v++g+ ++ f+a+rppGHH+e ++++GFC++N va+aa+ ++++ +  +k+vli+D+DvHhGn tq++f +d+sv+++SlH+ +e +fyP g+ g++d+vg   + +++g+nln+    ++s+
   MMETSP1325-20131115|662_1  73 DPERPQRTAAIAKRVRRDGflsDGPGMKHVKARKATDQELLLVHSPQQLETMGMIRdagaagahqrnakskdmsnsgrG---------GgrrrnedasddntpytpevisalrskgERESVYFNEKTYECALYAAGSTVELCQQVARGDLKNGFAAVRPPGHHCECHNPMGFCFFNSVAVAARAVQRSTDndVKKVLILDWDVHHGNATQHMFFEDESVMYVSLHRqDEGQFYPgGQcGDIDRVGgfhNPAARGTNLNVGFTSKVSQ 330
                 69***************99644446799************************777777777776666554444444440.........24555555555556666777777777768888*****************************************************************996544499*******************************96679****633699999997644679999999998877654 PP

  == domain 2    score: 88.3 bits;  conditional E-value: 3.6e-29
                 EE------HHHHHHHHHTHHHHHHHH--SEEEE----TTBTT-TT----B-----HHHHHHHHHHHH----EEEB------TTTTTT---HHHHHH CS
  PF00850.14 210 plepgtsdeeylkafekilkpllekfkpelvlvsaGfDalagDplgrlnlteegyaeltrdllelalakgkvvlvleGGYnlealaraalavlagl 305
                 p +   +d+eyl+af++++ p+++ f p+++++saGfDa++gDplg++++t+++ya++tr+l ++  ++g+vv vleGGYnle+++ +a av ++l
   MMETSP1325-20131115|662_1 730 PFDLTMGDAEYLTAFDELILPAVNVFAPDMIIISAGFDAAEGDPLGGYHVTPTAYAHMTRRLQAVPSSEGRVVAVLEGGYNLESISASASAVCEAL 825
                 5666789**********************************************************9*************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1006 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.41u 0.39s 00:00:01.79 Elapsed: 00:00:01.01
# Mc/sec: 2386.87
//
Query:       MMETSP1325-20131115|669_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.64
# Mc/sec: 906.12
//
Query:       MMETSP1325-20131115|673_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.68
# Mc/sec: 807.01
//
Query:       MMETSP1325-20131115|674_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.91
# Mc/sec: 334.44
//
Query:       MMETSP1325-20131115|675_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-14   51.2   4.3    1.1e-13   50.8   3.0    1.1  1  PF01569.16 PAP2 superfamily
  ------ inclusion threshold ------
       0.21   10.9   6.0      0.046   13.1   1.5    1.8  2  PF10821.3  Protein of unknown function (DUF2567)


Domain annotation for each model (and alignments):
>> PF01569.16  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   3.0   1.6e-17   1.1e-13      18     125 ..       8     121 ..       2     125 .. 0.88

  Alignments for each domain:
  == domain 1    score: 50.8 bits;  conditional E-value: 1.6e-17
                 .HHHTTT---TTT----HHHHH--------S-SS----TTT---HHHHHHHH--------............-B----HHHHHHHHH---TT-----TT----------HHHHHHHHHHH CS
  PF01569.16  18 vlKalfgrpRPdvlarddilldptegkaslfpsfPSgHaafafaaalllalllkrklgkr............vllallllilallvalsRvylgvHfpsDvlaGlllgiliallvylllk 125
                  lK+  +rpRP+++a  ++ + +  ++     s+PSgH++fa+a ++  a  +  + +              + l +  l+la+ v+++R  +++H+  Dv++Gl +g++ al++++ + 
   MMETSP1325-20131115|675_1   8 PLKHAAARPRPNSVALWKVGSVE--AQL----SWPSGHSSFAAAGCVSSAIAVAAMPSAPpsafglprhpatPFLGVPPLVLAVYVGITRWQDHWHHGADVMTGLAIGAMSALVAAASIS 121
                 37************998876665..333....*******999999999999998888888999**************************************************9998765 PP

>> PF10821.3  Protein of unknown function (DUF2567)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.12   8.2e+02      84     122 ..      46      56 ..      19      80 .. 0.55
   2 ?   13.1   1.5   6.7e-06     0.046      56      95 ..      81     120 ..      69     129 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.12
  PF10821.3  84 glvaaaavaagvGalvvrlRygaldldavPlsedkavay 122
                g+                            +s+  ava 
  MMETSP1325-20131115|675_1  46 GC----------------------------VSSAIAVAA 56 
                22............................222222222 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 6.7e-06
  PF10821.3  56 svlavvaavllWqlRehRGPvlvaalaiglvaaaavaagv 95 
                 vlav   ++ Wq   h G  ++++laig++ a  +aa +
  MMETSP1325-20131115|675_1  81 LVLAVYVGITRWQDHWHHGADVMTGLAIGAMSALVAAASI 120
                699**************************98876666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 596.99
//
Query:       MMETSP1325-20131115|672_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.04   13.9   1.1      0.051   13.5   0.3    1.5  1  PF09281.5 Taq polymerase, exonuclease


Domain annotation for each model (and alignments):
>> PF09281.5  Taq polymerase, exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.3   3.7e-06     0.051       3      47 ..      78     119 ..      76     139 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.7e-06
  PF09281.5   3 pdeeapaeaPegalvGellsrkePlskkaekaaekaakdarkrra 47 
                p    pa+aP g+++G+++s+++ ++kk+ k    aak   k+r 
  MMETSP1325-20131115|672_1  78 PSRAKPAPAPKGPFLGKIVSKPKQVAKKEIK---PAAKGVSKQRG 119
                666789*************999986666555...55555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.47s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 829.51
//
Query:       MMETSP1325-20131115|677_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-16   60.4   0.0    3.5e-16   58.9   0.0    1.8  1  PF00534.15 Glycosyl transferases group 1
    1.1e-12   48.1   0.0    1.7e-12   47.4   0.0    1.3  1  PF13692.1  Glycosyl transferases group 1
    5.5e-05   23.2   0.4    0.00035   20.6   0.2    2.1  1  PF13524.1  Glycosyl transferases group 1
  ------ inclusion threshold ------
       0.01   14.6   0.0       0.01   14.6   0.0    1.1  1  PF08811.6  Protein of unknown function (DUF1800)


Domain annotation for each model (and alignments):
>> PF00534.15  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0     1e-19   3.5e-16       6     170 ..       3     170 ..       1     172 [. 0.85

  Alignments for each domain:
  == domain 1    score: 58.9 bits;  conditional E-value: 1e-19
                 XXXXXXXX--EEEEE---BSTTT-HHHHHHHHHCSTT..GGGEEEEE----B-HHHHHHHHHH---EEE-----HHH...HHHHHTTECEEEE--SSB---HHHHHHHH----EEEE-TTBCCGGG-SSG.GGEE-TT.....-HHHHHHHHHHHHH-H.......HHHHHHHHHHH CS
  PF00534.15   6 rkklgknekkkiilsvgrlekeKgvdllikafallkeqenpnlklvivGdgeeekelkklaeelelsdnvifvgevpredleelyrnadifvlpsrsEgfGivllEAmaaglpviasnvggpaeivkdgvtGllvkpk.....daealaeaiekllkde.......elrerlgenar 170
                 r+ +g +e++ +i+ vgrl++eK++d++ +++++l e+ +  +k  +vG g+     +++ e       v++ g+++  +l e y ++di+++ps  E fG v lEA+a+g+p ++  ++    +v+dg  G+ v ++     d e++a+ +e++ k         +lr++++ nar
   MMETSP1325-20131115|677_1   3 RRHHGVKENELLIIWVGRLVPEKRPDVWRDVVKRLHEE-GRPVKGMVVGVGPC----QNMFEGM---PYVTVKGWLSGMALAEAYASSDILLFPSDVETFGNVTLEALACGVPSVVESNCSQ-HLVTDGCEGYAVHQGvddpdDKEQYAACVERYFKATksivvddDLRRKFAHNAR 170
                 6788899****************************995.**********6666....5664444...5699999999889***********************************9998865.678888889999887775667788888888888877777777788888888887 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.0   5.1e-16   1.7e-12       3     123 ..      13     136 ..      11     150 .. 0.79

  Alignments for each domain:
  == domain 1    score: 47.4 bits;  conditional E-value: 5.1e-16
  PF13692.1   3 lligssgsltndkdleelleealprlreklpdvelviiGkgpde..larllepnveflgfve..elaellasadvglaplrfgeglplKlleylaaGlPvvasdigaeglpeeegvgglv.ad..dpe 123
                lli ++g+l ++k  +   + +++rl e+ + v+  ++G gp +  ++    p v+++g+++   lae++as+d++l p+   e++++ +le+la+G+P v+ ++  + l  ++++g++v  +  dp+
  MMETSP1325-20131115|677_1  13 LLIIWVGRLVPEKRPDVWRD-VVKRLHEEGRPVKGMVVGVGPCQnmFEG--MPYVTVKGWLSgmALAEAYASSDILLFPSD-VETFGNVTLEALACGVPSVVESNCSQHLVTDGCEGYAVhQGvdDPD 136
                689999*99999**996655.******************9986555666..59********6669***************6.678****************977766677766666666652232332 PP

>> PF13524.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.2     1e-07   0.00035       1      88 [.      84     181 ..      84     184 .. 0.73

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 1e-07
  PF13524.1   1 ivLnpsrsespnlrlfEaaacGtpvvtddtsgleelfepgk.................eivlfedleelaeklryllanpeereaiaeaarervlaehtyehrae 88 
                i L+ps  e++  +++Ea+acG+p v + +   + l ++g+                     ++ +e   ++ ++   ++++r++ a++ar +++   ty +ra 
  MMETSP1325-20131115|677_1  84 ILLFPSDVETFGNVTLEALACGVPSVVE-SNCSQHLVTDGCegyavhqgvddpddkeqY---AACVERYFKATKSIVVDDDLRRKFAHNARLKAE---TYSNRAV 181
                6799************************.678899999999555555555555553222...223445555666666788888888888888877...7777775 PP

>> PF08811.6  Protein of unknown function (DUF1800)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0     3e-06      0.01      83     136 ..     162     214 ..      50     218 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3e-06
  PF08811.6  83 vlrelrearllravysprqLrerlvdfwsnhfvvsaekglevralagayerdai 136
                + + + +arl++ +ys+r +++r+ d ++n f v  +k  +  al+    rda+
  MMETSP1325-20131115|677_1 162 RRKFAHNARLKAETYSNRAVQQRMIDNYHNGFEVQIRKRTDPGALVK-LRRDAL 214
                5667889*******************************877677664.566655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      466  (0.0340843); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.69
# Mc/sec: 909.92
//
Query:       MMETSP1325-20131115|671_1  [L=555]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00019   20.6   0.0      0.037   13.1   0.0    2.6  3  PF01650.13 Peptidase C13 family


Domain annotation for each model (and alignments):
>> PF01650.13  Peptidase C13 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.11   1.5e+03      19      42 ..      37      60 ..      29      71 .. 0.84
   2 !   13.1   0.0   2.7e-06     0.037      70     117 ..     106     153 ..      94     160 .. 0.83
   3 !    4.3   0.0    0.0014        19     127     166 ..     210     249 ..     197     256 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.11
  PF01650.13 19 advchayqllkkkglkdeniivvm 42
                a v  ay  l+  g++ e+ii+++
   MMETSP1325-20131115|671_1 37 ALVGEAYAALRAAGVPAERIITIC 60
                778899**************9986 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 2.7e-06
  PF01650.13  70 gvkidYtgkkvtkenflavlkGdks.vgsgkvlksgkeDnvfiyltdhG 117
                 g k dY  ++v++ +f++vl+Gd    ++gkv+      +vf  + +hG
   MMETSP1325-20131115|671_1 106 GGKADYDCHDVNPATFIHVLTGDGGgGDGGKVVPAD-AGAVFFGVYSHG 153
                 5589********************966889998654.456777777777 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.0014
  PF01650.13 127 eddleakdLaeaLkkmhakkkykklviyleaceSgsmfee 166
                 +++l+a++++ aL+ + + ++ + +v  l+ c Sg+++e 
   MMETSP1325-20131115|671_1 210 RTRLYATQIRLALHSLASTHNKRPVVGLLNCCRSGGLVEF 249
                 6789***********999999899999*********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.34s 00:00:01.17 Elapsed: 00:00:00.65
# Mc/sec: 2046.12
//
Query:       MMETSP1325-20131115|681_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       655  (0.0479081); expected 273.4 (0.02)
Passed bias filter:                      558  (0.0408133); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.62
# Mc/sec: 332.40
//
Query:       MMETSP1325-20131115|680_1  [L=355]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-25   88.0   1.7    1.2e-24   86.2   1.2    1.8  1  PF02055.11 O-Glycosyl hydrolase family 30


Domain annotation for each model (and alignments):
>> PF02055.11  O-Glycosyl hydrolase family 30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.2   1.2   8.8e-29   1.2e-24     127     492 ..      12     350 ..       8     354 .. 0.78

  Alignments for each domain:
  == domain 1    score: 86.2 bits;  conditional E-value: 8.8e-29
                 SSS---S--STT-TT-TT----HHHHTTHHHHHHHHHHH-SS-EEEEEES---GGGB----------B------HHHHHHHHHHHHHHHHHHHTT---SEEES-SSTT--------SS-----HHHHHHHHHHT---TTTTSTT.TTSEEE-EEEEGGGTTHHHHHHHTSHHHHTTB---EEEEETTS-HHHH---HHHHSTTS-BEEEEEE----TTS-SS---------HHHHHHHHHHHTTB----BS-S..EB---.----TT------SEEEEGGGTEEEE-HHHHH----TTT-----EEE--EESS--.S...EEEEEEE-----EEEEEEE-SSS-EE..EEEE-TT--...-EEEEE---EEE CS
  PF02055.11 127 ssrvytyddtaddyqlanfsltkedfklkipyikraqkynqdlkllaapwaapgwlkttkavkGkGalkGkagdiyhqayakyfvkfleeyakskisfwglsteneptaGsdkktklqslgftaetqrdfikrdlGpalaassagknvkllilddnrgnlpkwadvvlndkdaakyvsGiavhayqdaeadkhldethkkfpnvlilgteaseGskskdqsvdyGsfdraadyasdildnlnnwvvGwternl..vldae.GGpswvsdfvdapviafialaqfykqpmfyaiahfskfikeGavridlslnvknle...leavallnpdGskvvvllnksslastysltikdaaksrdhylvtlspkaivt 492
                 s+  ++yd+t  d +l++fsl+       + ++kr q++ qd+ ll + w+ p+w+k +++++            y  +y++y++k+l+e+a +++   +l+ +nep      +  +             i  +l  + +  ++g + k+   d n    p++ + vl++   a  v+ +a h y  +   + l+  h++ p+v  + te     ++ +   d+ +f         ++  l+nw  G   + l   +d + G p    + +   + ++ +  ++ k   fy+++ fskf+++ avr+    n   ++   +++va+ np Gs vvv+ nk   a    l ++   +s + y v +    ++t
   MMETSP1325-20131115|680_1  12 SIGPWSYDETRGDTSLKDFSLQAPGE-AMVSWLKRMQEVGQDITLLGSIWSIPTWMKQNQNLR----------WEYRDTYTEYILKYLQEFAARGVVVDALTLQNEPLHIGPPEWTMYMDS-----SYAAILSNLTRT-KLDQHGFDTKIWAYDHNT-DKPEYPQYVLDN-SPAGTVDAVAWHCYASNVDWTALSTFHQQNPDVTQYMTECWLHLGTGEGFFDLPNF---------VVGPLQNWASGVLAWILggSVDYDvGYPGG-CGQCSGIIQVNRTAGTYEKTQDFYTLGQFSKFVEKHAVRVATDGNYDYPDgtgVQTVAFRNPSGSMVVVIVNKIVTA----LKVNLELESGEGYTVSVDGSSVTT 350
                 566689***************98765.5699***************************99875..........469999****************************76444444443322.....233455666655.456899******998875.67*******965.56778***********9999*******************99988888855555555.........444455555554444442223333033443.344555667889999999**********************99999877655559******************96544....556666677777777776665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.69
# Mc/sec: 1232.91
//
Query:       MMETSP1325-20131115|683_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-06   27.7   6.1    0.00046   19.9   0.9    2.0  2  PF03105.14 SPX domain


Domain annotation for each model (and alignments):
>> PF03105.14  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.9   3.4e-08   0.00046      91     128 ..      11      48 ..       2      75 .. 0.84
   2 !   11.2   0.1   1.6e-05      0.21     222     248 ..      76     102 ..      64     103 .] 0.90

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 3.4e-08
  PF03105.14  91 kseseFfkaLdkElekvddFykekekeleerledLekq 128
                 ++ ++Ff + ++El+kv++Fy  k +e+e +l d+ ++
   MMETSP1325-20131115|683_1  11 DEHTTFFLTVEDELQKVNQFYLTKLNEVESDLTDVSNE 48 
                 37789*************************99988776 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 1.6e-05
  PF03105.14 222 akrklkkalqelyrelelLksYqeLNr 248
                  + +l+++l  lyr+l +L+sY+ LN+
   MMETSP1325-20131115|683_1  76 LSSSLENRLLSLYRTLGQLQSYVWLNF 102
                 57899*********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       610  (0.0446167); expected 273.4 (0.02)
Passed bias filter:                      530  (0.0387654); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.92
# Mc/sec: 268.29
//
Query:       MMETSP1325-20131115|682_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-13   49.7   1.3    1.9e-13   49.6   0.9    1.0  1  PF13833.1  EF-hand domain pair
    1.9e-11   42.2   1.4    2.3e-11   42.0   0.9    1.1  1  PF00036.27 EF hand
    7.6e-10   38.6   0.6    8.1e-10   38.5   0.4    1.0  1  PF13499.1  EF-hand domain pair
    7.6e-06   24.9   0.1    1.1e-05   24.4   0.1    1.3  1  PF13202.1  EF hand
    0.00014   21.4   0.1    0.00015   21.3   0.1    1.0  1  PF12763.2  Cytoskeletal-regulatory complex EF hand
    0.00035   20.0   0.1    0.00047   19.7   0.0    1.3  1  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.058   13.3   0.0      0.066   13.1   0.0    1.1  1  PF09279.6  Phosphoinositide-specific phospholipase C, efhand-like
      0.078   12.9   0.0      0.084   12.8   0.0    1.0  1  PF08976.6  Domain of unknown function (DUF1880)
       0.13   11.9   0.1       0.14   11.8   0.1    1.0  1  PF14069.1  Stage VI sporulation protein F


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.9   1.2e-16   1.9e-13      15      51 ..       2      37 ..       1      40 [] 0.93

  Alignments for each domain:
  == domain 1    score: 49.6 bits;  conditional E-value: 1.2e-16
  PF13833.1 15 allglkglseeevdilfrefDtdgdGkisfeEFcvll 51
               ++lg k l++eevd+++re+D+dgdG i++eEF++++
  MMETSP1325-20131115|682_1  2 TNLGEK-LTDEEVDEMIREADIDGDGQINYEEFVKMM 37
               678999.*****************************9 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   0.9   1.5e-14   2.3e-11       1      28 [.      12      39 ..      12      40 .] 0.96

  Alignments for each domain:
  == domain 1    score: 42.0 bits;  conditional E-value: 1.5e-14
                HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkk 28
                e++e+++e+D DgdG+I++eEf++++++
   MMETSP1325-20131115|682_1 12 EVDEMIREADIDGDGQINYEEFVKMMMS 39
                79************************86 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.4   5.3e-13   8.1e-10      26      66 .]       1      37 [.       1      37 [. 0.92

  Alignments for each domain:
  == domain 1    score: 38.5 bits;  conditional E-value: 5.3e-13
  PF13499.1 26 lkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66
               +++lg++l+deev+e+    ++e+D +gdG++++eEf++++
  MMETSP1325-20131115|682_1  1 MTNLGEKLTDEEVDEM----IREADIDGDGQINYEEFVKMM 37
               6789988889999999....*******************98 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.1   7.1e-09   1.1e-05       4      25 .]      16      37 ..      13      38 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 7.1e-09
               HHHHH--S----B-HHHHHHHH CS
  PF13202.1  4 tFrafDlNgDGkIsreELkrlv 25
               + r++D +gDG+I+ eE+ +++
  MMETSP1325-20131115|682_1 16 MIREADIDGDGQINYEEFVKMM 37
               6799**************8864 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   9.6e-08   0.00015      39      69 ..       7      37 ..       2      39 .. 0.91

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 9.6e-08
  PF12763.2 39 kleedklekiwdladidedgkldfeefciam 69
               kl++++++++   adid dg++++eef+ +m
  MMETSP1325-20131115|682_1  7 KLTDEEVDEMIREADIDGDGQINYEEFVKMM 37
               8999***********************9877 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   3.1e-07   0.00047       7      27 ..      18      38 ..      12      40 .] 0.84

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 3.1e-07
               GCC-------B---HHHHHHH CS
  PF13405.1  7 klfDkdgdGkidaeELrdaLr 27
               +  D dgdG+i+ eE+++++ 
  MMETSP1325-20131115|682_1 18 READIDGDGQINYEEFVKMMM 38
               67899*************986 PP

>> PF09279.6  Phosphoinositide-specific phospholipase C, efhand-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.4e-05     0.066      32      70 ..       6      40 .]       2      40 .] 0.82

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.4e-05
               TT---HHHHHHHHHH---HHHHHTTEE-----HHHHHS- CS
  PF09279.6 32 erlteeeakaiiekyepneelkkkglLslegFlryLfSd 70
               e+lt+ee+ ++i + + +     +g+++ e+F+++++S+
  MMETSP1325-20131115|682_1  6 EKLTDEEVDEMIREADIDG----DGQINYEEFVKMMMSK 40
               4678888888888876665....6**************6 PP

>> PF08976.6  Domain of unknown function (DUF1880)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   5.5e-05     0.084       4      33 ..       8      37 ..       6      40 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 5.5e-05
               --HHHHHHHHTTS-B-----EEHHHHHHHT CS
  PF08976.6  4 ltdeqfdrlwselpvnakgrlkyqdflskl 33
               ltde+ d +  e  ++  g+++y++f+  +
  MMETSP1325-20131115|682_1  8 LTDEEVDEMIREADIDGDGQINYEEFVKMM 37
               9*************************9765 PP

>> PF14069.1  Stage VI sporulation protein F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   9.1e-05      0.14      45      79 .]       5      40 .]       2      40 .] 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.1e-05
  PF14069.1 45 nkpvskekedkiVqailkngm.pldleslaklmnkK 79
               ++++++e+ d+++     +g  + + e+  k+m+ K
  MMETSP1325-20131115|682_1  5 GEKLTDEEVDEMIREADIDGDgQINYEEFVKMMMSK 40
               6899*********999888888***********965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.30u 0.19s 00:00:00.49 Elapsed: 00:00:00.49
# Mc/sec: 195.62
//
Query:       MMETSP1325-20131115|684_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   15.1   0.0      0.021   14.8   0.0    1.1  1  PF13826.1 Domain of unknown function (DUF4188)


Domain annotation for each model (and alignments):
>> PF13826.1  Domain of unknown function (DUF4188)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.5e-06     0.021      63     108 ..      21      69 ..      17      74 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.5e-06
  PF13826.1  63 ekLeafakseeHreawrkfnkkvkk...sgavgifHEtYeveagayesi 108
                 +L +fa+ e H +a ++  ++v      gav + HE  ev +++ye+i
  MMETSP1325-20131115|684_1  21 RALPSFAHMELHCQAGQWQDRTVDCftrPGAVQLVHESEEVVNQDYETI 69 
                57999**********99999988744459******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.67
# Mc/sec: 311.17
//
Query:       MMETSP1325-20131115|676_1  [L=569]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-21   75.1   0.1    8.7e-21   74.4   0.0    1.3  1  PF06925.6  Monogalactosyldiacylglycerol (MGDG) synthase
    1.9e-07   30.7   0.0    4.4e-07   29.5   0.0    1.6  1  PF04101.11 Glycosyltransferase family 28 C-terminal domain
    7.9e-06   25.2   0.0    9.2e-05   21.8   0.0    2.2  2  PF00534.15 Glycosyl transferases group 1
    0.00011   21.3   0.1      0.034   13.2   0.0    2.3  2  PF13528.1  Glycosyl transferase family 1
     0.0016   17.1   0.0     0.0024   16.6   0.0    1.2  1  PF02350.14 UDP-N-acetylglucosamine 2-epimerase


Domain annotation for each model (and alignments):
>> PF06925.6  Monogalactosyldiacylglycerol (MGDG) synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   0.0   3.2e-24   8.7e-21       1     168 [.     196     363 ..     196     364 .. 0.92

  Alignments for each domain:
  == domain 1    score: 74.4 bits;  conditional E-value: 3.2e-24
  PF06925.6   1 HnqaaealkealkaefgdeyqvvvkdllkelnpfllkavlksYlflvkv...salyrllyygteekiqkksilaklatflakelaalleeeqPDiiisthplvaelplsvLkskellkrvlvvtvvtDfellhktWlrkeidryyvaskevkkealekG..idksnikvtGiP 168
                H+ aa+a+ e +  e   +++v v+d++ ++ +   ++ +k Yl l      s l + ++++t++k++  +++  +++ ++  +++ +  ++PD+i++th l +e+ +  L+ ++ll rv+ vtvvtD+ + h +W++   + ++v ++ +  ++ + +  i+++++ v GiP
  MMETSP1325-20131115|676_1 196 HKRAAQAIAETFALE-HPQIKVEVIDIVDFAGETFNQIYKKGYLSLAEKtwgSHLVGYVFDNTNKKKP-GTMSRLFQESFLLDFINYIFTFKPDVIVNTHFLSTEI-VAGLRRRKLL-RVPQVTVVTDYDA-HAFWANHPCETFFVGQEGAVANLTHVNpmIEEERVIVSGIP 363
                99**********999.599***************99*******9988774545999******995555.999999*******************************.999*****99.9**********98.********************9999865559**********9 PP

>> PF04101.11  Glycosyltransferase family 28 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   1.6e-10   4.4e-07      32     155 ..     421     539 ..     403     556 .. 0.76

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 1.6e-10
                 HCHHHC----.EC---STT..-----EEEE-EESSSSHHHHHHHH-EEEEE-----HHHHHHTT--EEEE.--TT....S-HHHHHHHHHHHHH---EEEE-S--------THHHCS---S---SSCH CS
  PF04101.11  32 eqvlhqtGks.nyeevkik..veklglkvevfsysdkmaeiikaadlvIsrAGagtiaellalgkplIlv.PlpeaaenhqdnnakelakagagrvllqkeltpekLeeallelaaekkrlaekskaa 155
                  +++++tG + ++ e+  k  v ++ + v+   +++ m e+++aad++++  G  t ae+la g+ +++v P+p     +++n     ++++ + ++  k  +   L ++l  + ++++rl+ +++++
   MMETSP1325-20131115|676_1 421 IEIVVITGRQkDLREQLSKipVPER-HFVKLEGFTKVMHEYMAAADVIVTKPGGLTTAESLATGLAMVIVnPYPG---QEMRN-----TDNLLENGIAVKANDLYLLGSKLNSIVSDPSRLKRMQRQS 539
                 58999***99777777777777777.899999*********************************9987767777...35555.....3444444444444444668888888888888888888876 PP

>> PF00534.15  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.091   2.5e+02      28      71 ..     194     237 ..     170     257 .. 0.79
   2 !   21.8   0.0   3.4e-08   9.2e-05      51     171 ..     425     541 ..     418     542 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.091
                 T-HHHHHHHHHCSTT..GGGEEEEE----B-HHHHHHHHHH--- CS
  PF00534.15  28 KgvdllikafallkeqenpnlklvivGdgeeekelkklaeelel 71 
                  g++++ +a+a+  + e+p++k+ ++  ++   e  ++++++++
   MMETSP1325-20131115|676_1 194 AGHKRAAQAIAETFALEHPQIKVEVIDIVDFAGETFNQIYKKGY 237
                 5999999999999999***********88888887777777765 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 3.4e-08
                 EE----B-HHHHHHHHHH---EEE-----HHH...HHHHHTTECEEEE--SSB---HHHHHHHH----EEEE-.TTBCCGGG-SSG...GGEE-TT-HHHHHHHHHHHHH-HHHHHHHHHHHHH CS
  PF00534.15  51 vivGdgeeekelkklaeelelsdnvifvgevpredleelyrnadifvlpsrsEgfGivllEAmaaglpviasn.vggpaeivkdgv..tGllvkpkdaealaeaiekllkdeelrerlgenark 171
                 vi G   ++k l+++  +  + +++++  e   + ++e++ +ad++v +    + G++  E +a gl+ +++n ++g     +d+   +G+ vk++d   l  +++++++d+   +r+ +++++
   MMETSP1325-20131115|676_1 425 VITG---RQKDLREQLSKIPVPERHFVKLEGFTKVMHEYMAAADVIVTK----PGGLTTAESLATGLAMVIVNpYPGQEMRNTDNLleNGIAVKANDLYLLGSKLNSIVSDPSRLKRMQRQSKS 541
                 6666...7788999999999999999998888999**************....********************777777777777699************************999999999875 PP

>> PF13528.1  Glycosyl transferase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   1.3e-05     0.034       3     128 ..     185     324 ..     183     344 .. 0.66
   2 !    5.8   0.0    0.0022       6.1     232     277 ..     446     490 ..     422     527 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.3e-05
  PF13528.1   3 Ilygvqgt.GnGHisRaralaeaLr.g...hevevl.lsgraeellseefn......vrrlpgltfvteng.rvdylk..tieknlellaklkrlvrklvklldasepDlvItDfepisllaa.....klqgvPvvgidhqyafla 128
                Il +v+g+ G GH   a+a+ae ++ +   ++vev+ +++ a+e +++ ++       ++ +g ++v + + + ++ k  t+ ++      + + + + ++ + +++pD++++ +   + ++a     kl +vP v++ ++y+ +a
  MMETSP1325-20131115|676_1 185 IL-IVHGSvGAGHKRAAQAIAETFAlEhpqIKVEVIdIVDFAGETFNQIYKkgylslAEKTWGSHLVGYVFdNTNKKKpgTMSRLF-----QESFLLDFINYIFTFKPDVIVNTHFLSTEIVAglrrrKLLRVPQVTVVTDYDAHA 324
                44.466744***************65534456666655666667776666545555544446666666322133332200222222.....4455667788999*********987777555547777999999999998888764 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0022
  PF13528.1 232 gnlqfrpfseegflqdLaeckavianaGfellsEalylgkpvllvp 277
                  +++++f+ + +++++a ++ +++++G  ++ E l  g+ +++v 
  MMETSP1325-20131115|676_1 446 HFVKLEGFT-KVMHEYMAAADVIVTKPGGLTTAESLATGLAMVIVN 490
                567788888.99***************************9999875 PP

>> PF02350.14  UDP-N-acetylglucosamine 2-epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   8.7e-07    0.0024     123     345 ..     331     555 ..     319     556 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 8.7e-07
  PF02350.14 123 sdlhfapteearenLlqeg..epperifvvGntviDal..llkreelkeslekseilekkekkyllvtiHrrenedeperlkeivealkalaek.envnvvfpvhnnprtkkailerlkelk..nvklieplgyld.flsllkkaklvltdSgGiq.eEapslgvpvlvlRdeteRpegveagt...nvl.vg.tdkeeIlkaieklledreelkkmsnaknpYgdgkaseriveil 345
                 ++  f+ +e a++nL   +  +++er++v G + + a+     +++  ++l   ++  +k ++++++t+  +  e++p    +i+++ ++  +  + +++v+++      +k ++e+l++++  + ++++  g+ + +++ +++a++++t  gG+   E+ + g++++++ +    +e ++  +   n + v+  d   + ++++++ +d ++lk+m+++++ Ygd  a+  i+e +
   MMETSP1325-20131115|676_1 331 CETFFVGQEGAVANLTHVNpmIEEERVIVSGIPCVPAFskCPAKRTCVKNL---GLVGEKGRPVVIITASGAVYEGRP----SIFTIYEQALSCeTGIEIVVITG----RQKDLREQLSKIPvpERHFVKLEGFTKvMHEYMAAADVIVTKPGGLTtAESLATGLAMVIV-NPYPGQEMRNTDNlleNGIaVKaNDLYLLGSKLNSIVSDPSRLKRMQRQSKSYGDSGACFTIAEHI 555
                 56679999999999998886689***************6534444444455...99899*****************88....44444444444446799999976....7788888898985567777777776553889*************99735999999999999.444445555444333344547745666778999999999*******************99999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.92u 0.40s 00:00:01.32 Elapsed: 00:00:00.83
# Mc/sec: 1642.80
//
Query:       MMETSP1325-20131115|686_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.062   12.5   5.3      0.068   12.4   3.7    1.1  1  PF05179.9  RNA pol II accessory factor, Cdc73 family
      0.063   12.4   7.3      0.067   12.3   5.0    1.1  1  PF13254.1  Domain of unknown function (DUF4045)
       0.16   10.4   1.3       0.15   10.4   0.9    1.1  1  PF04791.11 LMBR1-like membrane protein
       0.17   11.5   1.2       0.19   11.3   0.8    1.3  1  PF05203.11 Hom_end-associated Hint
       0.24   10.1   3.7       0.29    9.8   2.6    1.2  1  PF12725.2  Protein of unknown function (DUF3810)
       0.39    9.7   3.4       0.46    9.4   2.3    1.1  1  PF12700.2  HlyD family secretion protein
       0.95    8.5  18.8        1.3    8.1  13.0    1.1  1  PF05929.6  Phage capsid scaffolding protein (GPO) serine peptidase
        2.5    5.7   5.6        2.7    5.5   3.9    1.1  1  PF05518.6  Totivirus coat protein
        3.4    5.6  33.9        5.1    5.0  23.5    1.3  1  PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
        3.5    5.6  21.1        3.9    5.4  14.6    1.1  1  PF09770.4  Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PF05179.9  RNA pol II accessory factor, Cdc73 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   3.7     5e-05     0.068       6      81 ..      10      85 ..       5     130 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5e-05
  PF05179.9  6 listkklleekdiiaslqsakareekrekkqvveetkkaeeervaaeskqeeakynrydqerfka.eeteglkidtl 81
                +++k+ +ee + ia  q + +ree   +k+ +e ++ + +++++++++q++ +  r   e+ ++ e +++ +++++
  MMETSP1325-20131115|686_1 10 EQRQKQKMEEMKRIAEQQAQAKREEAARQKEEMEMKMRQAQMEMEMKQQQQQMELERQRMEAQMEmE-KKKAEMQQQ 85
               6778888889999999999999999999999999999999999999999988888888777777743.333333332 PP

>> PF13254.1  Domain of unknown function (DUF4045)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   5.0   4.9e-05     0.067     212     291 ..       8      87 ..       1     126 [. 0.74

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.9e-05
  PF13254.1 212 lgseskspsksgipkllsskdsektkeekeeseekeadtekssapkskeaakpkseekaarieaeeeaskskeeskkeee 291
                  +++++++ +++ ++ +++ + k++e+ +++ee e++ ++++ + + ++++++ e +++r+ea+ e++k+k e +++++
  MMETSP1325-20131115|686_1   8 EAEQRQKQKMEEMKRIAEQQAQAKREEAARQKEEMEMKMRQAQMEMEMKQQQQQMELERQRMEAQMEMEKKKAEMQQQQA 87 
                33455566666666777777777777777777777777778888888888888888888989999888888887777665 PP

>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.9   0.00011      0.15     207     283 ..       8      86 ..       1     142 [. 0.54

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00011
  PF04791.11 207 eaessvddilesvdrl.srlledveeqisks.ateegklsrelkkaaesnsqeedslaldreenkivkseeklllikee 283
                 eae++ ++ +e+++r  ++ ++  +e+   + + +e k+++   + + +++q++++l+ +r e ++  +++k  +++++
   MMETSP1325-20131115|686_1   8 EAEQRQKQKMEEMKRIaEQQAQAKREEAARQkEEMEMKMRQAQMEMEMKQQQQQMELERQRMEAQMEMEKKKAEMQQQQ 86 
                 4444444444444444433333333332222022222333333333334444445555555555554444444444443 PP

>> PF05203.11  Hom_end-associated Hint
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.8   0.00014      0.19     103     161 ..      16      72 ..       2     168 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00014
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05203.11 103 ivkevtksfekekegeeeakeiakefasvsaseeyieveieardfaalspevrkasrql 161
                   +e+++  e++  ++++++ ++++++    + ++ ++e+e++  ++  + +r+  ++ 
   MMETSP1325-20131115|686_1  16 KMEEMKRIAEQQA-QAKREEAARQKEE-MEMKMRQAQMEMEMKQQQQQMELERQRMEAQ 72 
                 1111111111111.1111111111111.1111222333333333333333333222222 PP

>> PF12725.2  Protein of unknown function (DUF3810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.6   0.00021      0.29      88     161 ..       5      78 ..       2     121 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00021
  PF12725.2  88 lgleeeeyseeelkelaeelieklnelrkkleedesgkvklklskkelekearkayeklsekypelsge.ypsvK 161
                ++ e e+ ++++++e+ +   +++++ r++ ++ +++++++k++++++e e++++ ++++ + ++++ +   + K
  MMETSP1325-20131115|686_1   5 AQREAEQRQKQKMEEMKRIAEQQAQAKREEAAR-QKEEMEMKMRQAQMEMEMKQQQQQMELERQRMEAQmEMEKK 78 
                555666777777777766666666666666665.55599999999999999999999988888887766333333 PP

>> PF12700.2  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.3   0.00034      0.46      65     133 ..      21      83 ..       2     135 .. 0.48

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00034
  PF12700.2  65 aaldqaeaelealsseeeeeiesklsqfsesrneslfedvyklkdeleallnkytnakksl...............nesglseq 133
                +                  +i +   q  +++ e+  ++ +++++ +++++++ ++ ++++               ++++++ q
  MMETSP1325-20131115|686_1  21 K------------------RIAE---QQAQAKREEAARQKEEMEMKMRQAQMEMEMKQQQQqmelerqrmeaqmemEKKKAEMQ 83 
                1..................1222...2223333333333333333333333333333333333333333333333311111111 PP

>> PF05929.6  Phage capsid scaffolding protein (GPO) serine peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  13.0   0.00092       1.3     184     270 ..       7      93 ..       1      97 [. 0.71

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00092
  PF05929.6 184 kkkeasddarfadvgeaveavaehvqekleatekrlseaekalseleqalaskadelakelaelkesLdktddla..qqarpkatGGgg 270
                ++ e+++++++ +++   e+ a+ ++e+ ++ ++++ e++ + +++e ++++++++++ e ++++++++ ++++a  qq++  a+GGgg
  MMETSP1325-20131115|686_1   7 REAEQRQKQKMEEMKRIAEQQAQAKREEAARQKEEM-EMKMRQAQMEMEMKQQQQQMELERQRMEAQMEMEKKKAemQQQQA-AAGGGG 93 
                456777788999999999999999999888888877.777777889999988888888888899998877665551044444.444444 PP

>> PF05518.6  Totivirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   3.9     0.002       2.7     631     712 ..      17      96 ..       2     131 .. 0.63

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.002
  PF05518.6 631 emeisgvppvsetappkkeanrtgeaglvsergaeqvsaeaetakpervargdpvrltahhaalrapqlpraggasdGgggv 712
                + e++  +   + a++k+e++  +++ +  +  + q+ +e ++++++++ + + +++ ++  + +a   +++  a++Gg+g+
  MMETSP1325-20131115|686_1  17 MEEMKRIAE--QQAQAKREEAARQKEEMEMKMRQAQMEMEMKQQQQQMELERQRMEAQMEMEKKKAEMQQQQAAAGGGGVGM 96 
                334444433..33445555555555555555666677777777778888877888887777777776665533444444333 PP

>> PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  23.5    0.0037       5.1     232     328 ..       6     102 ..       1     130 [. 0.44

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0037
  PF09606.5 232 qkqqnqqqqqkqlqqqqgqaqaqaqmqqqqqaqggmq.pqqmagaqaqvamqqqqtqqqaqqsqlqvlinqlqqlqqpqgdrnavgqgapgqllgpqs 328
                q++ + q+q+++++  +  a++qaq++    a ++ +   +m +aq+++ m+qqq+q++ + + ++++++  ++  + q ++ a+g+g+ g++ g+++
  MMETSP1325-20131115|686_1   6 QREAE-QRQKQKMEEMKRIAEQQAQAKREEAARQKEEmEMKMRQAQMEMEMKQQQQQMELERQRMEAQMEMEKKKAEMQQQQAAAGGGGVGMGFGGVG 102
                22222.22344555555555555555444333332220334555555555666655555555555555443333333344444444444444444333 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  14.6    0.0028       3.9     117     231 ..      13      86 ..       1     119 [. 0.35

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0028
  PF09770.4 117 sipdlqldeslwgtakkpeqqpaqapesqpqaaakakkllsleeveaqlqqrqqaqqlpqppaqvlpqqspprqaalpqqakpelpsqypqppqqlqqevqqqlqqapsqapaqa 231
                ++++++ ++ +       eqq++++ e++++++ + +  +   ++e+++         +q++++ l+ q ++ q++++                           ++++++++q+
  MMETSP1325-20131115|686_1  13 QKQKMEEMKRIA------EQQAQAKREEAARQKEEMEMKMRQAQMEMEM--------KQQQQQMELERQRMEAQMEME---------------------------KKKAEMQQQQ 86 
                111111111111......1122222222222222221112222222222........111111111111111111111...........................1111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3397  (0.248464); expected 273.4 (0.02)
Passed bias filter:                     1291  (0.0944266); expected 273.4 (0.02)
Passed Vit filter:                       370  (0.0270626); expected 13.7 (0.001)
Passed Fwd filter:                        84  (0.00614394); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.21u 0.48s 00:00:01.69 Elapsed: 00:00:01.07
# Mc/sec: 414.32
//
Query:       MMETSP1325-20131115|685_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       706  (0.0516384); expected 273.4 (0.02)
Passed bias filter:                      450  (0.032914); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.77
# Mc/sec: 628.65
//
Query:       MMETSP1325-20131115|688_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-36  125.2   0.0    3.2e-36  124.5   0.0    1.2  1  PF00809.17 Pterin binding enzyme
  ------ inclusion threshold ------
      0.011   14.8   2.0      0.052   12.6   0.0    2.4  2  PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal


Domain annotation for each model (and alignments):
>> PF00809.17  Pterin binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.5   0.0   4.6e-40   3.2e-36      57     210 .]       3     166 ..       2     166 .. 0.89

  Alignments for each domain:
  == domain 1    score: 124.5 bits;  conditional E-value: 4.6e-40
                 HHHHHHHHHHH.HHTTSEEEEE-SSHHHHHHHHHCSS-EEEEEEBS-HHHHHHHHHHH---EEEEE---...-----S.........HHHHHHHHHHHHHHHHHCHHHHHH....GGGEEEETTTT.TTSTTHHHHHHH..HHHHHHCS.HS--EEE--BGGGCTT CS
  PF00809.17  57 erlvpvlealrkeeekvpiSiDtfkaevaeaAlkagadiindvsglendeemaklaaeygaavVlmhmdgkpktmqee.........leyevdvveellealeerlealeeaGipperiilDpgigfgkteehnlellk..tldalrel.lgapllvggsrkrfig 210
                 +rl + l+al+  +  v+iSiDt +a vaeaA+ agad+indvsg++ d+ema ++a++ ++v+lmhm+g p+tmq+            ++  vve ++++l +r++++++aG+p++ ii Dpgigf+k++  nl+llk   l++l +  ++ pllvg+srkrfig
   MMETSP1325-20131115|688_1   3 RRLREELDALA-LDTPVLISIDTRRAAVAEAAVTAGADMINDVSGASFDPEMAAVMARARKPVCLMHMRGVPQTMQQPenlryggdgCGRD-GVVEVVAQELAKRIHNVVRAGLPRWMIIGDPGIGFAKDQGGNLQLLKpaALQQLSWRlKNTPLLVGASRKRFIG 166
                 68888888888.6899***********************************************************9765633333333334.79999*****************************************8447888888899*************97 PP

>> PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   1.0     0.063   4.3e+02      18      29 ..      27      38 ..      25      41 .. 0.88
   2 ?   12.6   0.0   7.5e-06     0.052       6      31 ..     171     196 ..     169     197 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.063
               HHHH-------- CS
  PF10399.4 18 ATaavgaVGaaa 29
               A++a +aV a+a
  MMETSP1325-20131115|688_1 27 AAVAEAAVTAGA 38
               88999*****98 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 7.5e-06
                ------HHHHHHHHHH---------H CS
  PF10399.4   6 skeptRRDFLylATaavgaVGaaaaa 31 
                +++p+RRD+ ++AT+ ++  G ++++
  MMETSP1325-20131115|688_1 171 EQDPQRRDWGTVATSCAASSGGVCMV 196
                789***********999988877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.60
# Mc/sec: 874.67
//
Query:       MMETSP1325-20131115|690_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.68
# Mc/sec: 257.26
//
Query:       MMETSP1325-20131115|687_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-20   71.0   0.2    6.7e-20   70.3   0.1    1.3  1  PF00957.16 Synaptobrevin
     0.0063   16.2   0.6      0.011   15.4   0.4    1.3  1  PF10158.4  Tumour suppressor protein


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.1   9.8e-24   6.7e-20       4      87 ..     217     300 ..     214     302 .. 0.96

  Alignments for each domain:
  == domain 1    score: 70.3 bits;  conditional E-value: 9.8e-24
  PF00957.16   4 klskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklkrkmwwknmklliililvvlililiiiivi 87 
                 ++++++++++ vk+im++N++ +l+r+e ld+L+ kt++L++ a +F+k+ar l+r  +++++k+ ++++ +v + + i i+vi
   MMETSP1325-20131115|687_1 217 RVQEVQDQIESVKRIMEQNVEMMLDRQELLDSLDAKTSDLNAAAGGFRKKARGLRRWHLMNQVKWGVAIGTLVTASVAIPIAVI 300
                 789***********************************************************************9999988876 PP

>> PF10158.4  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.4   1.5e-06     0.011      67     119 ..     196     248 ..     162     253 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.5e-06
  PF10158.4  67 tllaelrekqkryasyaeqlskvnelsdqlsriqiiledivpllEtlnelLde 119
                +l++ +    +r  ++a++l +v+e++dq+ +++ i+e++v+++    elLd+
  MMETSP1325-20131115|687_1 196 ELVTVMSPVLQRELEHANSLGRVQEVQDQIESVKRIMEQNVEMMLDRQELLDS 248
                5555555555566678999*************************998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       738  (0.0539789); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.38s 00:00:01.05 Elapsed: 00:00:00.70
# Mc/sec: 1037.28
//
Query:       MMETSP1325-20131115|692_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.31s 00:00:00.73 Elapsed: 00:00:00.74
# Mc/sec: 443.65
//
Query:       MMETSP1325-20131115|694_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.63
# Mc/sec: 315.71
//
Query:       MMETSP1325-20131115|695_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   13.9   7.6      0.031   13.9   5.3    1.6  2  PF07869.7 Protein of unknown function (DUF1656)


Domain annotation for each model (and alignments):
>> PF07869.7  Protein of unknown function (DUF1656)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   5.3   2.3e-06     0.031      10      40 ..       2      32 ..       1      38 [. 0.92
   2 ?   -0.7   0.0     0.081   1.1e+03      23      38 ..      32      47 ..      30      48 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.3e-06
  PF07869.7 10 fPplllvallAllltlllrrllarlglyrfv 40
               fP+++++++lAlll ll+r+l +r +  r +
  MMETSP1325-20131115|695_1  2 FPAIVIALALALLLLLLTRWLFWRAQSLRAI 32
               9***********************9988877 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.081
  PF07869.7 23 ltlllrrllarlglyr 38
               +++ + ++l+ l++ r
  MMETSP1325-20131115|695_1 32 IYVEVAHVLQPLRIRR 47
               5566788999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       599  (0.0438122); expected 273.4 (0.02)
Passed bias filter:                      509  (0.0372294); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.69
# Mc/sec: 274.37
//
Query:       MMETSP1325-20131115|696_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.65
# Mc/sec: 136.41
//
Query:       MMETSP1325-20131115|697_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-12   45.0   4.2    9.3e-07   28.5   0.2    2.2  2  PF00753.22 Metallo-beta-lactamase superfamily
    0.00069   19.0   0.0      0.001   18.5   0.0    1.2  1  PF12706.2  Beta-lactamase superfamily domain


Domain annotation for each model (and alignments):
>> PF00753.22  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.2   2.3e-07    0.0016       7      59 ..      92     142 ..      86     142 .. 0.85
   2 !   28.5   0.2   1.4e-10   9.3e-07     100     194 .]     187     282 ..     154     282 .. 0.77

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2.3e-07
                 EEEEEE..CSSEEEEES--SCHHHHHHHHHHHHHSHGGGEEEEEESSSSTTTH-- CS
  PF00753.22   7 nsyLve..gdggaiLiDtGlgteaalalllallglgpkdvdavilTHaHaDHiGG 59 
                 + y +   ++g+a++iD+ +   ++       ++ +  +v a + TH+H+DHiG+
   MMETSP1325-20131115|697_1  92 FYYAIGdkNTGEAFVIDACWVVNDIVST----VENDNMTVVAALATHYHYDHIGA 142
                 4566667778999999999999999998....899******************96 PP

  == domain 2    score: 28.5 bits;  conditional E-value: 1.4e-10
                 EEEEEECEEEEEEEEEEEEEEEETTCCSSTEEEEEE..........TTTTEEEETTTSSSTTSSSSSBGHHHHCCCCSEETCHHHHHHHHHHHHTSS.SEEEE.SC CS
  PF00753.22 100 lvdvdeevgdgilggrrllfvtghpghgpghgvvyl..........gggkilftGDllfvagtgrlgldltlrgakvrdpslweklldsllklaglppevlvp.gH 194
                    +++++ +   +gr  l ++++pgh+pg+ v+++           g ++l++GD++f++++grl+l  ++ ++ v+++        sl +l +lp+   v+ gH
   MMETSP1325-20131115|697_1 187 SALTPLSEVECLHVGRFKLTFLHTPGHSPGSTVIRVtgesgdaperSGVDLLIAGDTVFPGSCGRLDL--PGSDPYVMYD--------SLQRLSSLPDSLPVYpGH 282
                 4457888899999*******************************************************..7777777776........555555577777555588 PP

>> PF12706.2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.5e-07     0.001       3     140 ..     105     245 ..     103     273 .. 0.65

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 1.5e-07
                EEES-----TT-SS-.-SS-HHHHHT.T--EEE-S---GGG.S-....HHHHHHS-T................EEESSHHHHHHHH..H---..................--EEE-SSEEE-----.---HHHHSHH--EEE..........S--EEE-----S CS
  PF12706.2   3 iLiDpgfgtrslrlreqppaalldlp.ridavlisHaHaDHilgldslletikrlnk................pvygplgvaeflrekkagikalepefdkkraieidkekkieegdwwitavpaq.Hgsgryglnkgfvle........tegkkvyysgDtgy 140
                ++iD+ +      + +++ ++ ++    + a l +H H+DH +g    +e+  + +                 pv +p ++       + g  a +   d+  +   ++ + +++g +++t++  + H +g++     ++++         +g  ++++gDt++
  MMETSP1325-20131115|697_1 105 FVIDACW------VVNDIVSTVENDNmTVVAALATHYHYDH-IG----AEAKNFGTGntripgifelstefglPVHVP-EL-------ELGLAAKQTGLDESALTPLSEVECLHVGRFKLTFLHTPgHSPGSTV----IRVTgesgdapeRSGVDLLIAGDTVF 245
                6777777......444777777744449999**********.88....666555544555555554554444444444.22.......3444444444566666666666788888888888755514444433....55559999999867999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.65
# Mc/sec: 1161.31
//
Query:       MMETSP1325-20131115|698_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.73
# Mc/sec: 702.49
//
Query:       MMETSP1325-20131115|700_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-08   31.8   0.0    6.7e-08   31.5   0.0    1.1  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   4.9e-12   6.7e-08     174     271 ..       6      99 ..       3     105 .. 0.91

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 4.9e-12
  PF00248.16 174 lelcaekgvgiiaysplggGlltgkylseerkedkeprkdaqdaleelselakehgvslaqlalryalsrpavgsvipgassieqleenlkalelels 271
                 l  c+++g+ + +++ +++Gll g ++ ++ ++++++     ++ +++ +lak++gv+l  la+++a+  + v+ + +g++ + ++e n++ ++ +l+
   MMETSP1325-20131115|700_1   6 LMECQKQGIEVHNAGIFASGLLVGGSTLDYAPAPEHMI----QKRDQWAALAKQYGVTLPVLAMKFAILPQVVTKIAVGVKHPREVELNVNGIQERLD 99 
                 5679************************9999999876....99************************988899999**********99998866665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.65
# Mc/sec: 523.51
//
Query:       MMETSP1325-20131115|691_1  [L=459]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-28   99.7   0.0      2e-28   98.9   0.0    1.3  1  PF04727.8 ELMO/CED-12 family


Domain annotation for each model (and alignments):
>> PF04727.8  ELMO/CED-12 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.9   0.0   1.4e-32     2e-28      17     169 ..     112     277 ..      99     278 .. 0.93

  Alignments for each domain:
  == domain 1    score: 98.9 bits;  conditional E-value: 1.4e-32
  PF04727.8  17 enpehrrlLkklwklafpd....ekessrisekWkklGFqgsdPatDfrgtGlLgLenLlyfaenypdafqkllkeqskrekee....eypfavvsinlTavllellrigeldsealknlnrlq.....ffsslntfeelfvvllllfdklWkeeratiedfnkvl 169
                ++++hr  L+++w+l f+d    ++ ++r s+ W  +GFq+ dP+ D+rg G L+L+ +ly+  n++  ++++l+  ++r++++    +ypfa ++i +T  l e++ri + ++ a+++++ +        +s +tf el ++++ l+d+ W + +a+++dfn+++
  MMETSP1325-20131115|691_1 112 AEETHRGHLERIWELVFSDesgrAPPFERYSSAWCAFGFQQRDPSADIRGGGELSLDFMLYLLNNHRPLVERILRAHRRRAAQRgpyaNYPFACAAIGITRKLAEVFRIVQPHRGATDEYEVALkpfwqCVHSKTTFMELACAMFSLLDHKWDAAEASYMDFNRIM 277
                5678******************99*********************************************************9955555************************9999999877768999889999*****************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.39s 00:00:01.22 Elapsed: 00:00:00.72
# Mc/sec: 1527.68
//
Query:       MMETSP1325-20131115|702_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-09   37.4   0.6    1.6e-09   37.3   0.4    1.1  1  PF00631.17 GGL domain
      0.003   17.1   1.0      0.003   17.1   0.7    1.6  2  PF06696.6  Streptococcal surface antigen repeat
  ------ inclusion threshold ------
      0.012   14.0   1.0      0.012   14.0   0.7    1.1  1  PF05833.6  Fibronectin-binding protein A N-terminus (FbpA)
      0.035   12.2   0.2      0.035   12.2   0.1    1.0  1  PF09709.5  CRISPR-associated protein (Cas_Csd1)
      0.068   12.0   0.1      0.075   11.9   0.1    1.0  1  PF13393.1  Histidyl-tRNA synthetase
       0.19   11.5   2.3        0.2   11.4   1.6    1.1  1  PF03938.9  Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> PF00631.17  GGL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.4   6.9e-13   1.6e-09       3      71 ..       6      81 ..       4      83 .] 0.84

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 6.9e-13
  PF00631.17  3 qrikqlklklkrei.eqLkkeLer.eri.kvSkackelidYce..stkDpllpevwgppsageNpwiek......ggccw 71
                +++++++l+++++  +q+++eL+r +    +S+ c  +++Y    +++D+++ +      ++eN+++++      +  c+
   MMETSP1325-20131115|702_1  6 EKKMAKQLEREKQAlAQYEEELARwNKAeSTSETCNRIVTYLHssENDDYFVDPN----GSEENHYRTPpstgtcNEFCT 81
                566677777888888**********8888**************9999********....678******998655544455 PP

>> PF06696.6  Streptococcal surface antigen repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       2.5   5.7e+03       4       9 ..       6      11 ..       6      11 .. 0.75
   2 !   17.1   0.7   1.3e-06     0.003       5      20 ..      18      33 ..      18      33 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.5
  PF06696.6  4 eAkLaq 9 
               e k+a+
  MMETSP1325-20131115|702_1  6 EKKMAK 11
               679987 PP

  == domain 2    score: 17.1 bits;  conditional E-value: 1.3e-06
  PF06696.6  5 AkLaqYqaELArvQKa 20
               ++LaqY+ ELAr +Ka
  MMETSP1325-20131115|702_1 18 QALAQYEEELARWNKA 33
               59**********8886 PP

>> PF05833.6  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.7   5.3e-06     0.012     303     352 ..       4      53 ..       1      69 [. 0.89

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.3e-06
  PF05833.6 303 dlekrleneleklekkleklekeleeaekaenyrlkgelLtanlyaikkg 352
                + ek++ ++le+++++l+++e+el++ +kae+ ++    + ++l++ +++
  MMETSP1325-20131115|702_1   4 KSEKKMAKQLEREKQALAQYEEELARWNKAESTSETCNRIVTYLHSSEND 53 
                67999****************************99999999999988665 PP

>> PF09709.5  CRISPR-associated protein (Cas_Csd1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.5e-05     0.035      88     129 ..      11      52 ..       1      72 [. 0.72

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.5e-05
  PF09709.5  88 kkkkaeek...feaFvelleewaesesedekvkavlkflkkwgrl 129
                k+ ++  +    +++ e+l +w ++es +e+ + ++++l++  + 
  MMETSP1325-20131115|702_1  11 KQLER--EkqaLAQYEEELARWNKAESTSETCNRIVTYLHSS-EN 52 
                22222..13479****************************95.32 PP

>> PF13393.1  Histidyl-tRNA synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   3.3e-05     0.075     207     266 ..      11      69 ..       1      71 [. 0.86

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.3e-05
  PF13393.1 207 lelegdaevleealeelaaapalqaaldeleklaallealaeevrltlDlaelrgyeYyt 266
                ++le ++++l++ +eela+ +++++  +  +++++ l++ + ++++ +D+   ++ +Y t
  MMETSP1325-20131115|702_1  11 KQLEREKQALAQYEEELARWNKAESTSETCNRIVTYLHSSE-NDDYFVDPNGSEENHYRT 69 
                378999*******************************9975.79*********9999977 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.6   8.8e-05       0.2      73     104 ..       1      32 [.       1      52 [. 0.84

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8.8e-05
  PF03938.9  73 lsaeaekakeeelqakeqelqayaqqlqaelq 104
                ++a+ ek+++++l++++q+l++y+++l +  +
  MMETSP1325-20131115|702_1   1 MAAKSEKKMAKQLEREKQALAQYEEELARWNK 32 
                78999********************9984443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1081  (0.0790667); expected 273.4 (0.02)
Passed bias filter:                      854  (0.0624634); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.68
# Mc/sec: 292.50
//
Query:       MMETSP1325-20131115|704_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.59
# Mc/sec: 337.11
//
Query:       MMETSP1325-20131115|705_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-15   55.2   0.0      3e-12   46.8   0.0    2.4  2  PF07173.7  Protein of unknown function (DUF1399)
  ------ inclusion threshold ------
      0.054   11.6   1.0      0.075   11.1   0.7    1.1  1  PF00974.13 Rhabdovirus spike glycoprotein
      0.057   12.7   0.0       0.11   11.7   0.0    1.4  1  PF07059.7  Protein of unknown function (DUF1336)


Domain annotation for each model (and alignments):
>> PF07173.7  Protein of unknown function (DUF1399)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   6.6e-16     3e-12      59     128 ..      97     167 ..      71     169 .. 0.86
   2 !    6.0   0.0    0.0027        12       2      63 ..     171     232 ..     170     244 .. 0.82

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 6.6e-16
  PF07173.7  59 skiseDlvsavkrqskfvekvs..splisekvfleealaRYkrFlellkkneeklmlvPtlDidLiWhtHQl 128
                 ++   lv+    q +f +++    p + ++ +   a++RY +F+ l k+ +  + lvPtlD+dLiWhtH l
  MMETSP1325-20131115|705_1  97 RETIARLVEGATSQASFNKRILklGPRVVDEAWIRRAIERYAQFIALAKECPG-QTLVPTLDVDLIWHTHML 167
                44555688888899999999987889999*********************999.99**************77 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0027
  PF07173.7   2 ykedcerrfgrllnkksvedsikeesslkqsekvwkelyprepfelelislsvsstaskise 63 
                y++d++++ gr l++ + + + + +s+ ++++++w ++y  +++++   ++  + ++ + +e
  MMETSP1325-20131115|705_1 171 YAADMQEMLGRPLSHDTGQGTGELASAFDRTKRLWYDKYGAQYVHVTTFKDATQTRQRHKKE 232
                8999999********99999999999******************999888877444444444 PP

>> PF00974.13  Rhabdovirus spike glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.7   1.6e-05     0.075      85     156 ..     212     282 ..     202     285 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.6e-05
  PF00974.13  85 cylrwvgyktitfsiktieptiveckeaiqeakdgdtrteeslgfPppscgwltdvttteatlvivtpksVk 156
                 +y++  ++k  t  ++  ++  ++ ++a q+  d   r+  +++    scgw  +v +t + +v++  + Vk
   MMETSP1325-20131115|705_1 212 QYVHVTTFKDATQTRQRHKKEEAAKERAAQQRRDD-DRDRYQPYASCGSCGWGDEVWHTTQPHVQTEERDVK 282
                 68888888888888888888888888888887776.79999999999*****************99887775 PP

>> PF07059.7  Protein of unknown function (DUF1336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.4e-05      0.11     105     148 ..      92     135 ..      84     159 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.4e-05
  PF07059.7 105 aspafkellerflkgdevedaFrrerlKiiakivkgswivkklv 148
                + +a  e++ r+++g   + +F+++ lK+ +++v + wi +++ 
  MMETSP1325-20131115|705_1  92 DRTAARETIARLVEGATSQASFNKRILKLGPRVVDEAWIRRAIE 135
                4577889*********999*******************977654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       718  (0.0525161); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.65
# Mc/sec: 1069.14
//
Query:       MMETSP1325-20131115|699_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.2   0.7      0.025   13.4   0.5    1.4  1  PF01616.11 Orbivirus NS3


Domain annotation for each model (and alignments):
>> PF01616.11  Orbivirus NS3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5   1.8e-06     0.025      65     117 ..      42      94 ..      29     118 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.8e-06
  PF01616.11  65 rqiKv.qvneqvLkkLkkelaklkrkkrllrlieliaavvalltsavmalseve 117
                 r iK+ +v+++ ++kLk +l+k +++ ++ r+++l++ +v  +++a+ a+ e+ 
   MMETSP1325-20131115|699_1  42 RWIKRaKVSNRLVSKLKTKLKKSRKRGEITRCTTLLIRIVKAVSFAL-ATEEMV 94 
                 6677538******************************9999666554.555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       601  (0.0439585); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.60
# Mc/sec: 1286.04
//
Query:       MMETSP1325-20131115|707_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.63
# Mc/sec: 912.90
//
Query:       MMETSP1325-20131115|710_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.56
# Mc/sec: 1067.85
//
Query:       MMETSP1325-20131115|708_1  [L=558]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.1   6.9       0.18   11.3   3.1    2.4  2  PF07695.6 7TM diverse intracellular signalling
       0.11   12.3   1.8       0.63    9.9   0.0    2.8  3  PF14015.1 Protein of unknown function (DUF4231)


Domain annotation for each model (and alignments):
>> PF07695.6  7TM diverse intracellular signalling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.09   6.2e+02      20      44 ..      47      71 ..      31      89 .. 0.56
   2 ?   11.3   3.1   2.6e-05      0.18      24     146 ..     136     266 ..     114     275 .. 0.64

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.09
  PF07695.6 20 lflffslrdksylyYalyllsflly 44
                fl  ++ +++y    l ++++++ 
  MMETSP1325-20131115|708_1 47 TFLSARRNNRYYVLLRLTMIACAVG 71
               4444444444444444443333332 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 2.6e-05
  PF07695.6  24 fslrdksylyYalyllsfllyllslngllfqylwpnapealnnkllylfllllliffll.Fvrsflelkkkprllklllllavllsllllllpll........pyteslslaq..........llallvilfllligikawr 146
                f +++ +yl  + ++ +f+++l + +g++ +++ p+   ++    +++f+  +l   ++  +++f + +++++ l+ll++ av+ls+++l++ l+                 +          + ++++i+++++++++ ++
  MMETSP1325-20131115|708_1 136 FLIKNLYYLDWSHLAPVFSFLLGAEDGKGGHVISPDD--HITTLQELIFWHAIL-KGVVdAMNQFVNERRTSWALQLLIFQAVVLSAVFLVFVLFwigvgdpnC--------WddryaqeyapYQSAIAIFMMWVMVMVFVV 266
                4568888999999999999999999999***998833..344444445555554.56666788888887767*******************9999555555440........333333344433333333333333332223 PP

>> PF14015.1  Protein of unknown function (DUF4231)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   9.2e-05      0.63       3      51 ..      43      90 ..      41      91 .. 0.75
   2 ?   -1.8   0.0       0.4   2.8e+03      82      96 ..     104     118 ..     102     128 .. 0.78
   3 ?    0.1   0.0       0.1   6.9e+02      21      40 ..     207     226 ..     192     279 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 9.2e-05
  PF14015.1  3 qidwydkkaerarrrynllriitiilgvlaavvpilvslnslgagsnwl 51
                id++   a r+ r y llr++ i+ +v +a++p+  ++   +++++wl
  MMETSP1325-20131115|708_1 43 AIDNTFLSARRNNRYYVLLRLTMIACAVGTALMPM-SAIGEETSQGWWL 90
               57777778999999999999999998888888999.4444445566665 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.4
  PF14015.1  82 rataEslkaekwqfl 96 
                ++taE+++++ ++ l
  MMETSP1325-20131115|708_1 104 KRTAEECERQRYMVL 118
                789999999998765 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.1
  PF14015.1  21 lriitiilgvlaavvpilvs 40 
                l+++ + ++vl+av  ++v+
  MMETSP1325-20131115|708_1 207 LQLLIFQAVVLSAVFLVFVL 226
                34444444455555333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.40s 00:00:01.27 Elapsed: 00:00:00.74
# Mc/sec: 1806.98
//
Query:       MMETSP1325-20131115|703_1  [L=445]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-10   39.2   1.9    2.4e-09   37.3   1.3    2.0  1  PF12697.2  Alpha/beta hydrolase family
    8.6e-10   38.4   0.1    1.8e-09   37.3   0.1    1.5  1  PF12695.2  Alpha/beta hydrolase family
    0.00018   20.9   0.0       0.01   15.1   0.0    2.2  2  PF02230.11 Phospholipase/Carboxylesterase
     0.0014   18.1   0.0     0.0039   16.6   0.0    1.8  1  PF00561.15 alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.048   12.9   0.0      0.075   12.3   0.0    1.4  1  PF00756.15 Putative esterase


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   1.3   8.7e-13   2.4e-09      16     206 ..      92     259 ..      70     319 .. 0.65

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 8.7e-13
                H.....HHHHHT..TTSEEEEE-----------S...S--HHHHHHHHHHHHHH--.......--EEEE--------HHHHHH----.EEEEEEE------STT---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH--GGGG....GG------HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTTEE CS
  PF12697.2  16 p.....laeaLa..agyrvvapDlpGhGrSdrppdydpdtledlaadlaalldalgl......rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpasalrpagpsllrrllagraaalrdlaarafarlfdgdelealvradaaalaellraalldadlrealarldvPvlviageaDrvvppeearrlaealpgar 206
                p     l eaL+  a   vv+++++G+G ++ +p     +l+  + d++++l+a+          ++++G S+G++ al++a+++p+ + g++  +            + +++++ +++ r++a+ d+ +            +++++       el ++  l ad r+ala++   v+++++++D+v+++ +a+ l + + +ar
  MMETSP1325-20131115|703_1  92 PfigdvLHEALHstAVAAVVLVEYRGYGSNASLPV----SLAKNLTDAEDVLEAVTEtmevpeSSITVLGRSMGTLPALHLARSHPQ-IGGIIIDSGLY-------S-PLRHFAE-VVR-RNPAFSDVGE------------ADILAT------ELGKE--LAAD-RAALASFAGSVTLLYCADDDVLAVGDADVLFDEMARAR 259
                244444566774466778**************974....55555444444444444444477679*********************6.88888888777.......3.1222222.222.2223333332............233322......22233..4444.58999999999999999999999666644444444433 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.1   6.7e-13   1.8e-09       2     128 ..      70     256 ..      69     268 .. 0.69

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 6.7e-13
  PF12695.2   2 vvlvhGaggdssay............eplaealakr.gfavvavdlpghgasegaa........aakrvlaadll.....dleriilvGhSlGGgvalelagrddrvkglvllap......f.................pdgedlakltl.....................pvllihGtrDgvvppeeaeklakalp 128
                ++++hG+g +s  +              l eal++    avv+v+++g+g++++ +        +a++vl ++         + i ++G+S+G+ +al+la++++++ g+++ ++      +                           +                      v l++ ++D+v+ +  a+ l++++ 
  MMETSP1325-20131115|703_1  70 LIYFHGNGENSCKLlqrsdfalpfigDVLHEALHSTaVAAVVLVEYRGYGSNASLPvslaknltDAEDVL-EAVTetmevPESSITVLGRSMGTLPALHLARSHPQIGGIIIDSGlysplrHfaevvrrnpafsdvgeaD---------IlatelgkelaadraalasfagSVTLLYCADDDVLAVGDADVLFDEMA 256
                68899999887665344344444443333448888867899999*******9666666667777777777.333345556568****************************99997444441455555554434433330.........255555555556666666677799999999999999888888888876 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.016        43      12      28 ..      65      82 ..      61      92 .. 0.83
   2 !   15.1   0.0   3.8e-06      0.01      87     150 ..     132     195 ..     123     217 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.016
  PF02230.11 12 paqavvIflHGlGdsg.h 28
                p+++++I++HG G +  +
   MMETSP1325-20131115|703_1 65 PKDKILIYFHGNGENScK 82
                899**********98754 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 3.8e-06
  PF02230.11  87 aekleelidaelkkg.ipssriiigGFSqGaalalylaltspkplggivafsgalplnqkleqsa 150
                  +  e++++a  ++  +p+s i + G S+G+  al+la + p ++ggi++ sg +++ +++++  
   MMETSP1325-20131115|703_1 132 LTDAEDVLEAVTETMeVPESSITVLGRSMGTLPALHLARSHP-QIGGIIIDSGLYSPLRHFAEVV 195
                 55556666666666579*******************997766.7*************99998754 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-06    0.0039      27      79 ..     132     185 ..     108     270 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHHHHHHHSTSSS..EEEEE-B---HHHHHHHHHCGGGEEEEEEESB-- CS
  PF00561.15  27 tddlardleavldalglkk..ltlvGhSmGGmialayaaeypdrvkamvllgtva 79 
                   d+   leav +   + +  +t++G SmG++ al++a  +p+ + +++ ++  +
   MMETSP1325-20131115|703_1 132 LTDAEDVLEAVTETMEVPEssITVLGRSMGTLPALHLARSHPQ-IGGIIIDSGLY 185
                 56788889999999999999***********************.88888888864 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.7e-05     0.075     102     139 ..     138     175 ..     127     273 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.7e-05
                 HHHHHHHHH-B----EEEE--THHHHHHHHHHHH-TTT CS
  PF00756.15 102 LlplldanfrtapdgravaGqSmGGlgALilalkhpdr 139
                 +l  + +++++ +++ +v+G SmG l AL+la  hp+ 
   MMETSP1325-20131115|703_1 138 VLEAVTETMEVPESSITVLGRSMGTLPALHLARSHPQI 175
                 56667777777777799*******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.61
# Mc/sec: 1748.16
//
Query:       MMETSP1325-20131115|711_1  [L=332]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.7   1.3       0.34   10.7   0.9    1.5  1  PF05756.6 S-antigen protein
       0.51   10.4   9.4        1.5    8.9   4.8    2.3  2  PF09026.5 Centromere protein B dimerisation domain
        1.5    7.7   8.9          3    6.7   6.2    1.4  1  PF06213.7 Cobalamin biosynthesis protein CobT


Domain annotation for each model (and alignments):
>> PF05756.6  S-antigen protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.9   7.6e-05      0.34      59      85 ..     201     228 ..     177     237 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 7.6e-05
  PF05756.6  59 dle.eegegenddeedsnseesnndeen 85 
                +l+ + +ege++dee s+s+e   dee 
  MMETSP1325-20131115|711_1 201 ELDsDSDEGEDEDEECSDSDEEGADEET 228
                44414469******************96 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.074   3.4e+02      70      98 ..      91     118 ..      75     121 .. 0.75
   2 ?    8.9   4.8   0.00033       1.5      11      38 ..     201     229 ..     193     277 .. 0.61

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.074
  PF09026.5  70 qshilhlehdlvhvtrknharqagvrglg 98 
                +     +eh l   trk h  q+  rgl 
  MMETSP1325-20131115|711_1  91 KQLTRAIEHLLATGTRKTHQ-QSTPRGLK 118
                55556789**********95.67778875 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00033
  PF09026.5  11 dsesdseeeeedeeedeedede.edeeed 38 
                + +sds+e e+++ee  + ++e  dee +
  MMETSP1325-20131115|711_1 201 ELDSDSDEGEDEDEECSDSDEEgADEETG 229
                34666666665555544222220233333 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.2   0.00066         3     218     270 ..     203     255 ..     189     270 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00066
  PF06213.7 218 ssdseekrdedddkedeeddaseeeesgdsdslskdedasseetesketeaae 270
                +sds+e +ded++ +d++++ ++ee  g+ + ++k+ + +++  +s + + +e
  MMETSP1325-20131115|711_1 203 DSDSDEGEDEDEECSDSDEEGADEETGGSMHIKAKEVEMTKHGRNSLADDDVE 255
                578999999****************9999998888877776666665555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       534  (0.0390579); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.41s 00:00:01.05 Elapsed: 00:00:00.61
# Mc/sec: 1304.25
//
Query:       MMETSP1325-20131115|714_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.67
# Mc/sec: 439.93
//
Query:       MMETSP1325-20131115|713_1  [L=265]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1154.61
//
Query:       MMETSP1325-20131115|715_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-90  303.3   8.6    3.8e-90  302.1   6.0    1.6  1  PF08569.6 Mo25-like


Domain annotation for each model (and alignments):
>> PF08569.6  Mo25-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.1   6.0   2.8e-94   3.8e-90      36     334 ..       3     320 ..       1     321 [. 0.91

  Alignments for each domain:
  == domain 1    score: 302.1 bits;  conditional E-value: 2.8e-94
  PF08569.6  36 kaleevskqlsqlkeilvgeteaepteeqvaqlaqelleed..........llkeLisaLrklefesrkdvalifsnilrrsideksaptvdylvkkrpeilslLlkgyetseialkagevlreciksealakiiLk..seifwkffk.lvelstFeiasdafstlkelltrhkklvaefleknldeFf............ssfnkLlqsenYVtkrqslkLLgellldranskvmtkyisspenLkllmnllkdkskniqleaFhvfKvfVAnpnkskpiqkiLvkNrdkLlefledfstdrtddeqfldEkellikqiesLe 334
                 a++ ++  l+++k +lvg++e ep+ee+ ++laq+ll+e+          l++ ++++L+ l+fe+rkdv +ifs++ rrs  +  +p  +y+ ++ p +l++L+ g +t+ ial++g +lre+i++e++a+ +    ++ +w+ff+ + +ls+F++asdaf+tl++lltrhk+  + fl++ +d+ f             +++ Ll+s+nYVt+rqslkLLgellldr+n++vm+++iss +nL+ +m ll+dkskniq+eaFhvfKvfVAnp+k+ +i k+LvkN++kL+++l +f+ ++ +d qf+dEk+l+i ++++L+
  MMETSP1325-20131115|715_1   3 SATDAIATALTEIKIVLVGDSEREPNEERSKELAQSLLSEGedhelehkesLIVRMVVSLHLLPFEARKDVSHIFSHCARRSALH--FP--QYVISH-PLVLQKLVDGCGTHAIALNCGIMLREAIRYEEVAQALFDhpEKYVWAFFDvYLHLSNFDMASDAFATLRDLLTRHKATAKAFLQSRYDDVFgavddnsadsggGHYESLLKSSNYVTRRQSLKLLGELLLDRSNFNVMMQFISSKRNLQRIMLLLRDKSKNIQFEAFHVFKVFVANPRKPVKIIKVLVKNKEKLVDYLDTFHAEK-QDVQFMDEKQLIIDTLKQLQ 320
                57889999***************************99764222222222228889999***********************9998..34..6*****.**************************************97777******85689*****************************999998885555555554433699**************************************************************************************************.****************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       463  (0.0338648); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.38s 00:00:01.08 Elapsed: 00:00:00.71
# Mc/sec: 1150.93
//
Query:       MMETSP1325-20131115|718_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 380.37
//
Query:       MMETSP1325-20131115|712_1  [L=567]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-33  113.2   0.9      2e-32  112.0   0.6    1.5  1  PF02445.11 Quinolinate synthetase A protein


Domain annotation for each model (and alignments):
>> PF02445.11  Quinolinate synthetase A protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.0   0.6   1.5e-36     2e-32       3     268 ..     127     505 ..     122     515 .. 0.77

  Alignments for each domain:
  == domain 1    score: 112.0 bits;  conditional E-value: 1.5e-36
  PF02445.11   3 eikklkkeknavilaHnYqedeiqeiadlvG.......dSleLarkaae...teadvivfcGVkFMaetakiLspekt.....Vl.lpdleagCsladsitaeeveklkeky...pdalvvtYvNssaevKa.....esdivcTSsnavk.iveslee..dkkilflPDknLgryv..........................aketekki.......ilwkgsCsvHeefkaedveklreehpdakvlvHPEcseevvelad........vvgSTsqiikyv.........keseak.kfiigTelglverl....kkenpekellels.....................................ekavCptMkritlekllea 268
                 e+k+  +  n+ ++aH+Y+++e+q +  +v        dSl +  +a +   +  + i + GV+FM+e+++ + + +      V+ ++ +e gCsla+s++a e +++ ++    ++ l v+Y+N+s   Ka        i+cTS+n+v+ i++++++  + ++++ PD+++g+++                                         ++ +g+C+vH++f  + ve+l++++pda + +H E +  + ela+        vvgST++i++++         + +++k +f++gTe g+v+ +    +ke ++++ ++++                                      +a+Cp Mk++tl+ l+++
   MMETSP1325-20131115|712_1 127 ELKASLEAANLGVVAHFYMDPELQGLLAAVDwehivvaDSLVMGDAAVRqaeAGVSAIAVLGVDFMTESVRAIMDARGfehipVYrVAPQEIGCSLASSAEALEYQAWLQSAakkDNSLHVVYINTSLLTKAqaqatVPTITCTSGNVVQtILQAFSQipELTVFYGPDTYMGENLrvlfktvsempdeqikalhpahdqasV------RsllerleVFQQGMCVVHHMFGDSVVEDLETHYPDALLTAHLEVPGGMFELANkaavqgrgVVGSTANILNFIitrtkeavaAGKDEKlQFVLGTEAGMVTPIvksvQKELQGQDQVKVEiifpvaseavhatgeaveeglsivpgvsggegcsaagGCATCPFMKMNTLDGLIDV 505
                 455566669999***********998776666667777*****999976311345789************9888766545555542445679**********9997766555454899**************6655545689*****9872455454422445*************999999888887777777777665552......033444447888********************************999999999999999999******9987622221111122344568********987651111556666666776699999999999999999999999999999999999866999999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.90u 0.37s 00:00:01.27 Elapsed: 00:00:00.96
# Mc/sec: 1415.35
//
Query:       MMETSP1325-20131115|716_1  [L=543]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-25   89.9   0.0      2e-25   89.0   0.0    1.3  1  PF00534.15 Glycosyl transferases group 1
    3.6e-13   49.7   0.0    6.7e-13   48.8   0.0    1.5  1  PF13692.1  Glycosyl transferases group 1
    2.3e-06   27.7   0.0    4.3e-06   26.8   0.0    1.4  1  PF13579.1  Glycosyl transferase 4-like domain
    0.00052   20.1   0.0     0.0013   18.8   0.0    1.6  1  PF13524.1  Glycosyl transferases group 1
    0.00088   19.0   0.0     0.0017   18.0   0.0    1.4  1  PF13477.1  Glycosyl transferase 4-like


Domain annotation for each model (and alignments):
>> PF00534.15  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   0.0   7.3e-29     2e-25      13     159 ..     270     411 ..     260     418 .. 0.91

  Alignments for each domain:
  == domain 1    score: 89.0 bits;  conditional E-value: 7.3e-29
                 X--EEEEE---BSTTT-HHHHHHHHHCSTT..GGGEEEEE----B-HHHHHHHHHH---EEE---.--HHH...HHHHHTTECEEEE--SSB---HHHHHHHH----EEEE-TTBCCGGG-SSG.GGEE-TT-HHHHHHHHHHHHH-H CS
  PF00534.15  13 ekkkiilsvgrlekeKgvdllikafallkeqenpnlklvivGdgeeekelkklaeelelsdnvif.vgevpredleelyrnadifvlpsrsEgfGivllEAmaaglpviasnvggpaeivkdgvtGllvkpkdaealaeaiekllkde 159
                  ++ i+ ++gr+++eK++  l+++ +l++e     + l +vGdg++ +el+kl   ++ +++  f  g+++++dl +ly + d+ v  s +E fG +++EAma+g+p +   + g++++v++++ G+l+++kd+ ++a ++e +++++
   MMETSP1325-20131115|716_1 270 PDQFIMAFAGRISPEKDITFLVELHKLFRE---RGVWLALVGDGPQAEELSKL---HGEENKFYFkPGFLNHDDLAQLYASVDCCVSASTFETFGYTAIEAMACGTPFLGPRAQGYRDTVQHNKGGYLFDAKDITSAAHYLELIIEEK 411
                 5788999*********************76...5***********99999988...555555666269999*************************************************************************9986 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   2.5e-16   6.7e-13       5     130 ..     275     405 ..     271     410 .. 0.83

  Alignments for each domain:
  == domain 1    score: 48.8 bits;  conditional E-value: 2.5e-16
  PF13692.1   5 igssgsltndkdleelleealprlreklpdvelviiGkgpd..elarl..lepnveflgfv...eelaellasadvglaplrfgeglplKlleylaaGlPvvasdi.gaeglpeeegvgglv.addpeelaealv 130
                + ++g+ +++kd+  l+e + +++re+   v l ++G gp+  el +l  +e+++ f++     ++la+l+as d ++  + f e+++   +e++a+G+P ++ +  g+++  +++++g+l+ a d  + a+ l+
  MMETSP1325-20131115|716_1 275 MAFAGRISPEKDITFLVE-LHKLFRER--GVWLALVGDGPQaeELSKLhgEENKFYFKPGFlnhDDLAQLYASVDCCVSASTF-ETFGYTAIEAMACGTPFLGPRAqGYRDTVQHNKGGYLFdAKDITSAAHYLE 405
                5677889999****9998.98999886..799999***999644999986677999996655988**************9977.66*******************988999998788888887778877777776 PP

>> PF13579.1  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   1.6e-09   4.3e-06       2     150 ..      80     236 ..      79     241 .. 0.71

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 1.6e-09
  PF13579.1   2 GieryvrelaeaLaarGheVtvlt....paaapgapeleedgvrvhrlpvprrpspladlaalralrrll.rqrrerpdvvhahs.ptaglaarlarrragvPlvvtlhglllregsglvrrly.....rrlerrllrradavlavseaeaeelralgvp 150
                G+++++++ ++ L + Gh+ +v t       +++ ++ + +  +++   + + p+ +  + +l+ l +++ + r+ +p v h+   p+ +++   a+   ++P + ++h++ ++  + ++++++     r le  +   +da  +vs+     l ++g++
  MMETSP1325-20131115|716_1  80 GVSTRFTAHLKLLKQYGHRAHVCTieeeL--DADVRRSVDAVDHLTSTCFFWYPAKRFPHMSLANLTKIWnACRTLKPEVMHVTLcPSVPMFFICAC-LLNIPMIMSIHTDSVTLLNKCKQPWWvvllcRFLEPLGSYLVDATYTVSRSYGSILKQRGLR 236
                9999********************65321..222332333333444333444443333333444444444333889********9444555555555.***********9988888888888887777788899**************999999888876 PP

>> PF13524.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   4.6e-07    0.0013       9      57 ..     355     405 ..     333     422 .. 0.81

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 4.6e-07
  PF13524.1   9 espnlrlfEaaacGtpvvtddtsgleelfepgkeivlfe..dleelaeklr 57 
                e++ +   Ea+acGtp +  +++g+++  +++k + lf+  d+ ++a+ l+
  MMETSP1325-20131115|716_1 355 ETFGYTAIEAMACGTPFLGPRAQGYRDTVQHNKGGYLFDakDITSAAHYLE 405
                7888999****************************9996656655555555 PP

>> PF13477.1  Glycosyl transferase 4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   6.4e-07    0.0017      18     111 ..      90     189 ..      78     209 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 6.4e-07
  PF13477.1  18 kelkergyevhivtpdkdkkneeeaegikvhrl.........psprkspleylkafklkklikkikpDvvhahyvkpygllgslaarlsgvipvilsvwGldf 111
                k lk++g+  h+ t +++  + ++   ++++++         p +r + ++++++ k+++  + +kp+v+h+    ++ ++  ++a l++ ip i s++  ++
  MMETSP1325-20131115|716_1  90 KLLKQYGHRAHVCTIEEEL-DADVRRSVDAVDHltstcffwyPAKRFPHMSLANLTKIWNACRTLKPEVMHVTLCPSVPMFF-ICACLLN-IPMIMSIHTDSV 189
                5689999999999998886.334566777777765555555443344477777899*********************99988.7778888.********5444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.85u 0.40s 00:00:01.25 Elapsed: 00:00:00.85
# Mc/sec: 1530.85
//
Query:       MMETSP1325-20131115|720_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|721_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.063   13.4   5.9      0.086   12.9   4.1    1.2  1  PF09537.5  Domain of unknown function (DUF2383)
       0.18   11.6   3.8       0.19   11.4   2.4    1.3  1  PF11559.3  Afadin- and alpha -actinin-Binding
       0.26   10.8   4.2       0.28   10.7   2.6    1.4  1  PF03962.10 Mnd1 family
       0.66    9.4   3.1       0.82    9.1   2.1    1.2  1  PF10828.3  Protein of unknown function (DUF2570)
       0.68    9.2   5.9       0.79    9.0   4.1    1.2  1  PF07471.7  Phage DNA packaging protein Nu1
        1.2    8.9   6.1        1.1    9.0   1.5    2.1  2  PF13863.1  Domain of unknown function (DUF4200)
        4.1    7.3   9.3        5.2    6.9   6.5    1.2  1  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit


Domain annotation for each model (and alignments):
>> PF09537.5  Domain of unknown function (DUF2383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   4.1   4.4e-05     0.086      23     103 ..       4      80 ..       2      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.4e-05
  PF09537.5  23 aaekvkdpelkalfqemaaereqaaaeLqaevralggepeesgslagklhrawidlksaltsddeeavLeelergEdaale 103
                aae+++    ++ ++e  +  +++ ++L+a+ ++l  ++e ++ + g l++   ++++   +  e+a++e++   E +a +
  MMETSP1325-20131115|721_1   4 AAEEAD----RKRLEEKLRASADTNDQLRAHCKDLEAQAEADHAFIGVLQESTNKVRAEAAEAAEHAAVENALMTEHKARA 80 
                666666....4556666777888999**************************************************99976 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.4   9.9e-05      0.19      54     110 ..      10      66 ..       3      89 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 9.9e-05
  PF11559.3  54 resleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqkl 110
                r+ lee+lr +  ++++l+ + + l+ q e+ +  +  lqe  ++ +++ +++ +++
  MMETSP1325-20131115|721_1  10 RKRLEEKLRASADTNDQLRAHCKDLEAQAEADHAFIGVLQESTNKVRAEAAEAAEHA 66 
                555666666666666666666666666666666666666666666666655555444 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.6   0.00014      0.28     100     154 ..       5      62 ..       1      80 [. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00014
  PF03962.10 100 eeteereelleelkeleeelkklkkele...klakldpekveklkeetevakesanrw 154
                  e+++r++l e+l++  +++++l++ ++   + a+ d + +  l+e+t++++++a   
   MMETSP1325-20131115|721_1   5 AEEADRKRLEEKLRASADTNDQLRAHCKdleAQAEADHAFIGVLQESTNKVRAEAAEA 62 
                 45679999999999999999999876654448899**************999998765 PP

>> PF10828.3  Protein of unknown function (DUF2570)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.1   0.00042      0.82      30      97 ..      13      82 ..       5      94 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00042
  PF10828.3 30 LkaenkaqaqtieqqekankrLseaLeqErqAVekqqkianelkrkveenaee..vktilkqepCakvkl 97
               L+ + +a a+t  q ++  k L  + e ++  +   q+++n++++++ e+ae+  v + l +e  a+++l
  MMETSP1325-20131115|721_1 13 LEEKLRASADTNDQLRAHCKDLEAQAEADHAFIGVLQESTNKVRAEAAEAAEHaaVENALMTEHKARADL 82
               45555667777777778899***************************99988544899999999999887 PP

>> PF07471.7  Phage DNA packaging protein Nu1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   4.1    0.0004      0.79      53     119 ..      18      84 ..       4      99 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0004
  PF07471.7  53 rdaeieneklrkeveelraaseadlqpgtieyerrRltraqadaqeLknakekkevvetelvtfvLs 119
                r++   n++lr++ ++l a++ead     +  e   ++ra+a  +  + a e++ + e +    +L+
  MMETSP1325-20131115|721_1  18 RASADTNDQLRAHCKDLEAQAEADHAFIGVLQESTNKVRAEAAEAAEHAAVENALMTEHKARADLLA 84 
                5667789**********************************98877788888877777666555555 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.5   0.00056       1.1      68     115 ..       2      49 ..       1      57 [. 0.67
   2 ?    2.3   0.2     0.069   1.4e+02      24      55 ..      70     101 ..      47     104 .] 0.53

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00056
  PF13863.1  68 kaeeekkekkekeeeikklkaqleelkaeiekleekleeyqkYeefLe 115
                +a++e+  +k +ee+++   ++ ++l+a+++ le++ e  + +  +L+
  MMETSP1325-20131115|721_1   2 NAAAEEADRKRLEEKLRASADTNDQLRAHCKDLEAQAEADHAFIGVLQ 49 
                677777777777777777777777777777777777765554444444 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.069
  PF13863.1  24 erkeeelkereeelekkqeelqeslikfnkfl 55 
                + ++ e k+r   l+ + +e q++l   n f+
  MMETSP1325-20131115|721_1  70 NALMTEHKARADLLAGDLKETQSQLLDANAFI 101
                34555555555555555566665555555555 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   6.5    0.0027       5.2      30     101 ..      11      84 ..       4      99 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0027
  PF13094.1  30 ralerqlaaelksielLqeeirreeaelekdeekleeLeknakalererkeesknl..hpvlqelesevleena 101
                + le +l a +++ ++L+++ ++ ea  e d   +  L++ + + ++e +e  +++  +  l ++++  ++  a
  MMETSP1325-20131115|721_1  11 KRLEEKLRASADTNDQLRAHCKDLEAQAEADHAFIGVLQESTNKVRAEAAEAAEHAavENALMTEHKARADLLA 84 
                579999************************************************97555555555555544433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1199  (0.0876975); expected 273.4 (0.02)
Passed bias filter:                      776  (0.0567583); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.76
# Mc/sec: 327.92
//
Query:       MMETSP1325-20131115|723_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.57
# Mc/sec: 429.69
//
Query:       MMETSP1325-20131115|722_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.73
# Mc/sec: 600.73
//
Query:       MMETSP1325-20131115|725_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.059   12.9   0.7        1.7    8.2   0.1    2.4  3  PF12799.2 Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.019   2.5e+02      24      36 ..      19      32 ..      11      41 .. 0.53
   2 ?    8.2   0.1   0.00012       1.7      14      35 ..      30      53 ..      19      66 .. 0.69
   3 ?    7.1   0.4   0.00027       3.8       3      23 ..      44      73 ..      44      76 .] 0.68

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.019
  PF12799.2 24 pnLktLnLsnN.pi 36
               +  +  +Ls+  ++
  MMETSP1325-20131115|725_1 19 QAIEKVDLSGMsNL 32
               55555566553123 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00012
  PF12799.2 14 kdlppelanLpn..LktLnLsnNp 35
               ++l +++ +L++  L+tLnL++ p
  MMETSP1325-20131115|725_1 30 SNLAGDIESLKDcpLQTLNLAGHP 53
               45555566677667******9865 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.00027
  PF12799.2  3 LevLdLsnN.........nIkdlppelanL 23
               L++L+L++          nIkdlp ++  L
  MMETSP1325-20131115|725_1 44 LQTLNLAGHpqlgskitgNIKDLPQSITDL 73
               899999997666666666677777766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 357.10
//
Query:       MMETSP1325-20131115|719_1  [L=843]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-20   72.2   0.1    8.3e-20   71.2   0.0    1.6  1  PF00621.15 RhoGEF domain
  ------ inclusion threshold ------
      0.036   13.3   0.0       0.11   11.7   0.0    1.8  1  PF02825.15 WWE domain


Domain annotation for each model (and alignments):
>> PF00621.15  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.0   1.2e-23   8.3e-20       3     165 ..     254     464 ..     252     502 .. 0.80

  Alignments for each domain:
  == domain 1    score: 71.2 bits;  conditional E-value: 1.2e-23
                 HHHHHHHHHHHHHHHHHHHHTHHHHHHC........................TSS-HHHHHHHSTTHHHHHHHHHHHHHHHHH............HHH--....------.......HHHH....HHHH-.......HHHHHHHHHCTHHHHHHHHHHHHHH-HHHHHHHH..HHGGG.TT--HHHHCTHHHHHHHHHHHHHHHHHHT--SHHHHHHHHH CS
  PF00621.15   3 eElietErsYvrdLevlvevyieplkes.......................ksilseeeiksiFsnieeilklhkeflekLee............rlkek....kdaqki.......gdvf....lklee.......flkvYseYisnydkalkllkelskknskfkkflkeceespecskldLeslLikPvqRlprYplLLkellkqtpedhpdyedle 165
                  El++tE++Yv+ L+v+  ++++pl++                         ++++ +e+ ++F+++e  +k+h++fl++L e            ++++          +        +vf                 l++Y+  i +y+k+ +l  +l+++ ++++  ++ +e+      ++L slLi  v RlprY lL +e+lk+ ++ ++  ++ +
   MMETSP1325-20131115|719_1 254 LELVSTEQNYVEVLRVINVNFRKPLERWvahsekeldgaasasgsgrsmqsDPMVTGDEVAQMFGQVELAYKMHQDFLTELIEardkafsegpveNMEDYelcaA----LaeslgakLEVFalgkS---AqgtpnsyNLNCYKVHIPEYEKMRTLTIQLREERPQLQFAMEMLER--VDPAQKLGSLLINTVTRLPRYILLCREVLKNLQKLEEAERAHK 464
                 69***********************999***********************9*******************************6666666554442222222221....13333333555554331...13556677899************************99888886555..556789*************************986553334444 PP

>> PF02825.15  WWE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.7e-05      0.11      15      43 ..      57      85 ..      48      90 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.7e-05
  PF02825.15 15 sngkWrpYspavsehIenayaakertlev 43
                  g+Wrp++++ ++ I +a+ ak++t  +
   MMETSP1325-20131115|719_1 57 AGGEWRPFTEEQCRVIDQAWHAKQSTVML 85
                5799********************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (843 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       594  (0.0434465); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.29u 0.38s 00:00:01.67 Elapsed: 00:00:01.06
# Mc/sec: 1905.78
//
Query:       MMETSP1325-20131115|724_1  [L=451]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-24   84.9   8.3    2.7e-24   84.9   5.7    2.0  2  PF08240.7  Alcohol dehydrogenase GroES-like domain
    1.2e-21   76.5   0.7    1.9e-21   75.8   0.5    1.4  1  PF00107.21 Zinc-binding dehydrogenase
      2e-05   25.4   0.0    5.3e-05   24.0   0.0    1.7  1  PF13602.1  Zinc-binding dehydrogenase
     0.0041   16.9   1.1     0.0069   16.1   0.8    1.3  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
  ------ inclusion threshold ------
      0.012   15.5   1.0      0.021   14.6   0.7    1.4  1  PF13460.1  NADH(P)-binding


Domain annotation for each model (and alignments):
>> PF08240.7  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.9   5.7   9.9e-28   2.7e-24       2     107 ..     116     247 ..     115     249 .. 0.89
   2 ?   -1.4   0.1      0.64   1.8e+03      26      57 ..     293     324 ..     286     340 .. 0.63

  Alignments for each domain:
  == domain 1    score: 84.9 bits;  conditional E-value: 9.9e-28
                TEEEEEEEEB---HHHHHHH--.TTTT--SSEE----BE-EEEEE----B------EEEE--EEE.-SSSHHHHTT-GGG-.........................STBEE---B-----BSEEEECGGGEE CS
  PF08240.7   2 gevlvkvkaaGiCgsDlhivkgekelevklplilGhEivGiveevgegvkklkvGdrvvveplis.cgeCeaCkegeenlc.........................eeakllgvkldGgfaeyvvvpekklv 107
                ++v +++k+aG+C+sD+h  +ge+++   +p++ GhEi G+v++vge v++++vGd v v +++  c +C++C++g e++c                         e+ ++++  + Gg++e +vv++  ++
  MMETSP1325-20131115|724_1 116 TDVAIQIKYAGVCHSDIHQARGEWSKGGVFPMVTGHEIGGVVAAVGEAVTTFAVGDLVGVGCMVDsCRSCKYCQRGLEQYCkgkgngggggvftygdstnkykhssEDVEVTNAVTYGGYSESIVVNHGFVC 247
                79************************************************************9999***************999999999999999888777755444444444499******999987776 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.64
                TTT--SSEE----BE-EEEEE----B------ CS
  PF08240.7  26 elevklplilGhEivGiveevgegvkklkvGd 57 
                ++ vk+++++G E++ +   + ++ ++++ G 
  MMETSP1325-20131115|724_1 293 HMGVKFGVAMGAEVTVVSRGTAKQEDSVRLGA 324
                56778888888887533222333333355555 PP

>> PF00107.21  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   0.5   6.9e-25   1.9e-21       1     128 [.     290     411 ..     290     413 .. 0.97

  Alignments for each domain:
  == domain 1    score: 75.8 bits;  conditional E-value: 6.9e-25
                 ----HHHHHHHHH--EEEEEESSHHHHHHHHH----EEEETTTS-HHHHHHHHTTT--BSEEEEET-.CTHHHHHHHCB-----EEEC----EEEEEEEHHHHHHCT--EEE--SSSHHHHHHHHHHH CS
  PF00107.21   1 GvGlaavqlAkalGarviavdsseeklelakelGadhvinskdedfvkaireltggkgvdvviecvgagatfeqalkllapgGrvvvvggtsganvefdlrklllkektiqGsllgnpeeleealqll 128
                 G+G++ v++  a+Ga+v++v++   k e   +lGa+h+++s++    +a++++ +   +d v+++v+a++ + + l+ll+ +G++v+vg++  + v++++++l++ +kt+ Gsl g+++e++e+l+++
   MMETSP1325-20131115|724_1 290 GLGHMGVKFGVAMGAEVTVVSRGTAKQEDSVRLGAHHFLDSTNK---EAMAAAADS--FDFVLDTVAANHDVSALLDLLTVDGKMVMVGIPP-DAVPISAFRLIMGRKTLAGSLIGGIQETREMLEFC 411
                 89***************************************997...899999998..*********************************9.********************************985 PP

>> PF13602.1  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   1.9e-08   5.3e-05       1     116 [.     322     435 ..     322     441 .. 0.70

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 1.9e-08
  PF13602.1   1 lGadevidyr.dedf.lagdgvDvvldtvgeageelleallrvl..ggGrlvsig.g....klltaaareggaarkllflfsvkaneeraeeleelaalveaGklkpvvdrvfpLeeaaeAhrrl 116
                lGa++++d + +e+  +a d++D vldtv    ++ ++all++l  + G++v +g          ++a++   +rk l    ++    + +e +e++++   + ++  ++     +e++eA++r 
  MMETSP1325-20131115|724_1 322 LGAHHFLDSTnKEAMaAAADSFDFVLDTVA--ANHDVSALLDLLtvD-GKMVMVGiPpdavP---ISAFRLIMGRKTLAGS-LIG---GIQETREMLEFCGRHNITCDIE-MIRADEVNEAWERA 435
                8*********77777977899*********..333347788888866.99877663355432...3332323333332222.233...4455999999999999999999.99999999999885 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.8   2.5e-06    0.0069       3      76 ..     282     361 ..     280     373 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.5e-06
                 EBEEB-------HHHHHHHH---EEEE--SSHHHHHHHHHTT......EEE-SSHHHHHHHB....SEEEE-SSSHHHHHHHHH CS
  PF03446.10   3 kigfiGlGvMGspmalnllkagyevavynrtkekveelvaeg......akaaesieelvasl....dvvilmvkagkavdevie 76 
                 k++++GlG +G+  ++  ++ g ev+v+ r ++k e+ v  g       +  e +++    +    d+v+  v a+++v ++++
   MMETSP1325-20131115|724_1 282 KLAVVGLGGLGHMGVKFGVAMGAEVTVVSRGTAKQEDSVRLGahhfldSTNKEAMAA----AadsfDFVLDTVAANHDVSALLD 361
                 788899988888777777999******************999654443333444444....34555*************99876 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.7   7.8e-06     0.021       2      73 ..     284     355 ..     283     374 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7.8e-06
  PF13460.1   2 aviGAtGktGrrivkellarghevtalvRnpsklpe..ssgvtivkkDlfdledlaealagvdvvvdafgarpe 73 
                av+G  G  G   vk  +a g evt+++R   k ++    g++ + +D +++e++a+a +++d v d+++a ++
  MMETSP1325-20131115|724_1 284 AVVG-LGGLGHMGVKFGVAMGAEVTVVSRGTAKQEDsvRLGAHHF-LDSTNKEAMAAAADSFDFVLDTVAANHD 355
                5666.578888888888999***************9976677766.899********************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.73
# Mc/sec: 1480.49
//
Query:       MMETSP1325-20131115|727_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.74
# Mc/sec: 336.79
//
Query:       MMETSP1325-20131115|730_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-08   33.9   1.3    3.6e-08   32.9   0.9    1.6  1  PF01585.18 G-patch domain
     0.0024   17.5   0.1     0.0057   16.3   0.0    1.6  1  PF12656.2  DExH-box splicing factor binding site


Domain annotation for each model (and alignments):
>> PF01585.18  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.9   5.2e-12   3.6e-08       2      44 ..     207     250 ..     206     251 .. 0.93

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 5.2e-12
  PF01585.18   2 sniGfkmLakmGWkp.GqGLGkneqGivePieakikkdrkGlGa 44 
                  n G+++LakmG+++   GLG + qG+ eP+ +   ++r GlG+
   MMETSP1325-20131115|730_1 207 QNRGYQLLAKMGFQEdAGGLGAERQGRMEPVPTALIPKRQGLGH 250
                 689************5568************************7 PP

>> PF12656.2  DExH-box splicing factor binding site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   8.4e-07    0.0057      27      78 ..     203     255 ..     182     256 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 8.4e-07
  PF12656.2  27 evPveeFGaAlLrGmGWk.egqgigkkkkgsvkpeepkrRpkglGLGakpaek 78 
                 +P  + G +lL  mG++ +  g g +++g+++p+     pk+ GLG+ +++k
  MMETSP1325-20131115|730_1 203 HIPEQNRGYQLLAKMGFQeDAGGLGAERQGRMEPVPTALIPKRQGLGHGDKMK 255
                6888999***********556789***********************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.60
# Mc/sec: 1170.22
//
Query:       MMETSP1325-20131115|731_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|728_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-67  223.2   0.6    1.2e-66  223.0   0.4    1.1  1  PF00071.17 Ras family
    5.3e-21   75.2   0.0    8.9e-21   74.4   0.0    1.4  1  PF08477.8  Miro-like protein
    7.9e-18   64.1   0.1    1.1e-17   63.7   0.1    1.1  1  PF00025.16 ADP-ribosylation factor family
    1.2e-06   27.7   0.3    1.6e-06   27.3   0.2    1.2  1  PF04670.7  Gtr1/RagA G protein conserved region
      2e-05   23.7   0.2    2.6e-05   23.4   0.1    1.2  1  PF09439.5  Signal recognition particle receptor beta subunit
    7.6e-05   22.1   0.1    0.00013   21.3   0.1    1.5  1  PF00009.22 Elongation factor Tu GTP binding domain
    0.00018   21.3   0.0     0.0003   20.6   0.0    1.4  1  PF01926.18 50S ribosome-binding GTPase
    0.00075   19.5   0.0     0.0013   18.7   0.0    1.6  1  PF13401.1  AAA domain
     0.0065   15.8   0.0       0.11   11.9   0.0    2.2  2  PF10662.4  Ethanolamine utilisation - propanediol utilisation
      0.007   16.6   0.1      0.013   15.7   0.1    1.9  1  PF13191.1  AAA ATPase domain
     0.0091   15.1   0.2       0.07   12.2   0.2    2.0  1  PF02421.13 Ferrous iron transport protein B
  ------ inclusion threshold ------
       0.01   14.3   0.2      0.014   13.9   0.1    1.2  1  PF05133.9  Phage portal protein, SPP1 Gp6-like
      0.019   14.0   0.2      0.083   11.9   0.0    1.9  2  PF03193.11 Protein of unknown function, DUF258
      0.024   14.2   0.1      0.054   13.1   0.1    1.9  1  PF07728.9  AAA domain (dynein-related subfamily)
      0.038   14.0   0.1          1    9.4   0.0    2.2  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.047   13.0   0.1          4    6.7   0.0    2.3  2  PF05272.6  Virulence-associated protein E
      0.055   12.8   0.0       0.13   11.6   0.0    1.6  1  PF13555.1  P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.0   0.4   1.4e-69   1.2e-66       1     161 [.      10     170 ..      10     171 .. 0.99

  Alignments for each domain:
  == domain 1    score: 223.0 bits;  conditional E-value: 1.4e-69
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 Kl+l+Gds+vGK++lllrf +d+++e+y+sTigvdf++++i++dgk++kl+iwDTAGqe+f++++s+yyr+a+gi++vyd+t++esf+nvk+w++ei r+a env+ +LvGnK+Dle++r+v te+++e+a++l++ fletSAk+++nve+af++++++i+
   MMETSP1325-20131115|728_1  10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDSESFNNVKQWLHEIDRYACENVNKLLVGNKSDLESTRKVPTEQAKEFADSLNIDFLETSAKNSQNVEKAFTTMASQIK 170
                 89**********************************************************************************************************************************************************99985 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   0.0   1.1e-23   8.9e-21       1     119 []      10     124 ..      10     124 .. 0.95

  Alignments for each domain:
  == domain 1    score: 74.4 bits;  conditional E-value: 1.1e-23
  PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                k++++Gd+gvGKs ll +++ +++   + +  ++g +  + t+ +d++t +l++wd++g+e++        + a +i++vyd+td es+++v   ++wl e+ +++ + ++  lvgnk D
  MMETSP1325-20131115|728_1  10 KLLLIGDSGVGKSCLLLRFADDTYT--ESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDSESFNNV---KQWLHEIDRYACEnVNKLLVGNKSD 124
                7899*********************..99999*********************************88888*********************9...77999999999888*********98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.1   1.3e-20   1.1e-17      15     171 ..       9     165 ..       3     172 .. 0.80

  Alignments for each domain:
  == domain 1    score: 63.7 bits;  conditional E-value: 1.3e-20
                 EEEEEE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHHHHH CS
  PF00025.16  15 lrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewl 171
                 +++ll+G  + GK+ +l ++ ++  ++  + Tig  f+++++    k++k+++wD  Gqe+ R + ++Y++  +++i v D++d+e +++ k+ L+++ ++   ++v  l+++NK Dl+++ +    +++   ++l    ++   ++sa + ++++++++ +
   MMETSP1325-20131115|728_1   9 FKLLLIGDSGVGKSCLLLRFADDTYTEsYISTIGvdFKIRTIDLdgKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDSESFNNVKQWLHEI-DRYACENVNKLLVGNKSDLESTRKVPTEQAKEFADSL----NIDFLETSAKNSQNVEKAFTTM 165
                 799*******************9987757889874467777766669**************************************************6.778899*************987654433333222333....3555666666666666665555 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.2   1.9e-09   1.6e-06       1     125 [.      10     127 ..      10     174 .. 0.73

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 1.9e-09
  PF04670.7   1 klLLmGksgsGKtSmrsiiF.snylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspeakvfvli.hKmDlis 125
                klLL+G sg GK+++      + y    + ++g+  +++  ++   + +kl++wD+ Gqe+f + +     ++ ++  + +i V D++  + +e++++ ++ l+ + +y  e     l+ +K Dl s
  MMETSP1325-20131115|728_1  10 KLLLIGDSGVGKSCLLLRFAdDTYTESYISTIGVDFKIRTIDLD-GKTIKLQIWDTAGQERFRTIT-----SSYYRGAHGIIVVYDVT--D-SESFNNVKQWLHEIDRYACENVNKLLVgNKSDLES 127
                89************876554145666667788888888888886.6779**********9999885.....7899999*********9..4.67899999999999999888777777756777654 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.1   3.2e-08   2.6e-05       6     129 ..      11     130 ..       7     176 .. 0.82

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 3.2e-08
                EEEE--TT---HHHHHHHHHSS-------S.S-EEETT-.....-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT--- CS
  PF09439.5   6 vllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv..ksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflaks 129
                +ll+G s  GK  l+ r   d+++++++S     +  ++   + k  kl++ D  G+e++r+  +    + + ++g++ v D t d+   ++v  +l ei        ++v+ l+  nK++l  +++
  MMETSP1325-20131115|728_1  11 LLLIGDSGVGKSCLLLRFADDTYTESYISTiGVDFKIRTidLDGKTIKLQIWDTAGQERFRTITSS---YYRGAHGIIVVYDVT-DSESFNNVKQWLHEIDRYAC---ENVNKLLVGNKSDLESTRK 130
                79***************************97667776663345677788899*********86555...5889*****999987.8999**********987776...6677777789**9977664 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   1.6e-07   0.00013      56     181 ..      45     164 ..       9     193 .. 0.72

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 1.6e-07
                 BSSEEEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-....S-HHHHHHHHHHHH...TT--EEEEEE-TTST......CHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHH CS
  PF00009.22  56 iksaaisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG....vepqTeevlrlakk...lgvkiivviNKiDrv......eaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLlea 181
                  k+ +i+l+  +k+ ++++ Dt G + F   +++  r + g ++v d+++          ++ l+ +++   ++v+ ++v NK D+        ++++e  ++l+ ++l               +Sa++ +++++ + +
   MMETSP1325-20131115|728_1  45 FKIRTIDLD--GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDSesfnN---VKQWLHEIDRyacENVNKLLVGNKSDLEstrkvpTEQAKEFADSLNIDFL--------------ETSAKNSQNVEKAFTT 164
                 455556666..9*************************************9974442...444444444411167779********976644444444444444444444..............4444444444433333 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   3.7e-07    0.0003       2     112 ..      11     120 ..      10     140 .. 0.65

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 3.7e-07
                 EEEE--TT---HHHHHHHHCST....CTEETS-TT-SSSESEEEEETT.E...EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTSHHHHHHHHHHHHH.....H..TCCCEEEEE CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgek....aakvsdypgtTrditenevkke.k...iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasavlkeadkellnel.....e..akkplilvl 112
                 + ++G + vGKS L+ +  +++    +  +  + ++ r+i     + + k   ++++Dt+G           e+++ ++ +  + a+++++v d+++  +e+ +++ ++l     +  ++++ +lv 
   MMETSP1325-20131115|728_1  11 LLLIGDSGVGKSCLLLRFADDTytesYISTIGVDFKIRTI-----DLDgKtikLQIWDTAG----------QERFRTITSSYyRGAHGIIVVYDVTD--SESFNNVKQWLheidrYacENVNKLLVG 120
                 679***************9643111122333333444444.....2221223357******..........2367777788889**********654..4456677666643344145555555555 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.7e-06    0.0013       7      86 ..      11     106 ..      10     175 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1.7e-06
  PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae............karvvfveapastspkellqkllsalglpakg.....rltteellealqealrrr 86 
                l+++G sGvGK++ll r+a++ + e+++ +            + ++++ ++ + +  +e ++++ s + ++a+g       t +e ++++ + l++ 
  MMETSP1325-20131115|728_1  11 LLLIGDSGVGKSCLLLRFADDTYTESYISTigvdfkirtidlDGKTIKLQIWDTA-GQERFRTITSSYYRGAHGiivvyDVTDSESFNNVKQWLHEI 106
                589******************9999999999998866666664444455555555.55555666666666666666666555555555555555555 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   0.00013      0.11       3      51 ..      10      60 ..       8      68 .. 0.87
   2 ?    1.3   0.0      0.23   1.9e+02      90     117 ..      79     105 ..      68     119 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00013
  PF10662.4  3 killiGkvgaGKTtLtqalkgeel..kykkTQaielseeviDtPGeYlenr 51
               k+lliG +g+GK  L  +  +++   +y +T  ++++ ++iD  G+ ++ +
  MMETSP1325-20131115|728_1 10 KLLLIGDSGVGKSCLLLRFADDTYteSYISTIGVDFKIRTIDLDGKTIKLQ 60
               799***************999776568***************999877665 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.23
  PF10662.4  90 kpviGiiTkidlaedeenielveelLka 117
                +   Gii   d++ d+e+ ++v+++L++
  MMETSP1325-20131115|728_1  79 RGAHGIIVVYDVT-DSESFNNVKQWLHE 105
                5666999999999.999********986 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.6e-05     0.013      26      51 ..      11      31 ..       8     226 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.6e-05
  PF13191.1 26 llvtGpsGiGKSsLlrelakpiller 51
               ll++G+sG+GKS Ll ++a     ++
  MMETSP1325-20131115|728_1 11 LLLIGDSGVGKSCLLLRFA-----DD 31
               79*************9954.....44 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.2   8.7e-05      0.07       3     169 ..      11     178 ..       9     193 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 8.7e-05
                 EEEE--TT---HHHHHHH----TB--------S--BB--EEETTEEEE..EEE------SSSSSHHHHHHHHHHHHH-.-SEEEEEEEGG...GHHHHHHHHHHHHHTT-SEEEEEETHHHHHC---EB-.HHHHHHH----EEEEBCCGTB--HHHHHHHHHHCTCG-XXX.. CS
  PF02421.13   3 valvGnpnvGKttlfnaltgakqkvgNwpGvTVekkegklklkgkeve..ivDLPGiYsLsayseeekvardylleek.pdviinvvDas...nlernLyLtlqllelgvpvvvalnmiDeaekkgikid.lkkLselLgvpvvktvarkkkgieelleaiievaekeekekkl 169
                 + l+G+  vGK+ l+ + ++ + + +  + + V+ k  +++l+gk+++  i D  G           +++++y    +   v+ +v D++   n+++ L  + +    +v+ +++ n+ D  +++++  + +k+++ +L+++ ++t+a++++++e+ +++++++++ + k++++
   MMETSP1325-20131115|728_1  11 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKlqIWDTAGQERF------RTITSSYYRGAHgIIVVYDVTDSEsfnNVKQWLHEIDRYACENVNKLLVGNKSDLESTRKVPTEqAKEFADSLNIDFLETSAKNSQNVEKAFTTMASQIKMRMKTQPV 178
                 567888888888888888877777777777888888888877776654114455554444......34444444322202244456666522244455555555555578888999999988888876652789*************************999988887776653 PP

>> PF05133.9  Phage portal protein, SPP1 Gp6-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   1.7e-05     0.014     256     341 ..      97     182 ..      49     193 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.7e-05
                --HHHHHHHHHHSSEEEE.....------EEE-----HHHHHHHHHHHHHHHHHHTT----S.-----------HHHHHHHHHHHHH CS
  PF05133.9 256 edddetvkelkdakviklerlgagddpdakfltkelpaaslenyldalkedikefssvadlp.dekfggnaSaealkakysaleqka 341
                ++ +++  e+ ++   ++++l+ g ++d++  t ++p+++++++ d l+ d+ e s+  + +   +f+++aS + +++k ++ ++k+
  MMETSP1325-20131115|728_1  97 NNVKQWLHEIDRYACENVNKLLVGNKSDLES-TRKVPTEQAKEFADSLNIDFLETSAKNSQNvEKAFTTMASQIKMRMKTQPVDNKR 182
                5666777777777777889999********9.8*****************************888899*****************98 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0    0.0001     0.083      39      59 ..      12      32 ..       9      84 .. 0.67
   2 ?   -1.2   0.0       1.1   8.7e+02       3      37 ..     135     169 ..     132     173 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.0001
                EEE-------HHHHHHH---- CS
  PF03193.11 39 vlvGqSGvGKSsLinallpel 59
                +l+G SGvGKS L+ +++ ++
   MMETSP1325-20131115|728_1 12 LLIGDSGVGKSCLLLRFADDT 32
                699**********98887765 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 1.1
                 HHHHHHHH---EEEEEECHHHTT-HHHHHHCTTSB CS
  PF03193.11   3 elkeeleklgyevlvlsvktkegleelaellkdkt 37 
                 + ke  ++l++++l +s+k+++++e+  +++++++
   MMETSP1325-20131115|728_1 135 QAKEFADSLNIDFLETSAKNSQNVEKAFTTMASQI 169
                 55666677788888888887777777666665554 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   6.7e-05     0.054       2      28 ..      11      37 ..      10     204 .. 0.69

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.7e-05
               EEEE------HHHHHHHGGGGB..S--EE CS
  PF07728.9  2 vlLvGppGtgKselaerlaeal..nreve 28
               +lL+G++G+gKs l  r+a  +  +    
  MMETSP1325-20131115|728_1 11 LLLIGDSGVGKSCLLLRFADDTytE--SY 37
               89****************9988532..33 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0013         1       1      64 [.      11      87 ..      11     126 .. 0.73
   2 ?    2.5   0.1      0.17   1.4e+02      14      51 ..     135     174 ..     133     186 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0013
                EEEE-------HHHHHHHHHHC.............THEEEEEECCSSS.SST-HHHHHHHHHHHHHHHHTS-SEEEEE CS
  PF00004.24  1 vllyGppGtGKTllakavakel.............gvefleisgsell.skyvgesekkirelfkeakekakpsilfi 64
                +ll+G  G+GK+ l    a ++             +++ + ++g+++  + +  ++++++r + ++  + a + i+++
   MMETSP1325-20131115|728_1 11 LLLIGDSGVGKSCLLLRFADDTytesyistigvdfKIRTIDLDGKTIKlQIWDTAGQERFRTITSSYYRGA-HGIIVV 87
                69*******************64444444444444677888888888867788899999999999888887.655444 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.17
                 HHHHHHHHCTHEEEEEECCSSS..SST-HHHHHHHHHHHH CS
  PF00004.24  14 lakavakelgvefleisgsell..skyvgesekkirelfk 51 
                  ak  a +l+++fle+s+++    +k +  ++++i++ +k
   MMETSP1325-20131115|728_1 135 QAKEFADSLNIDFLETSAKNSQnvEKAFTTMASQIKMRMK 174
                 68999999*****999997766336788888888877766 PP

>> PF05272.6  Virulence-associated protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.005         4      47      88 ..       3      44 ..       1      51 [. 0.82
   2 ?    4.2   0.0     0.028        22      88     122 ..     109     143 ..      95     183 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.005
  PF05272.6 47 PgckfDevliLqGeqgigKstflkkLggewftdsikstegkd 88
               P   + + l L G+ g+gKs +l  ++++ +t+s  st g d
  MMETSP1325-20131115|728_1  3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 44
               55555567899**********************988877655 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.028
  PF05272.6  88 daleklqgvliveiaEleafskaeveaiKafitrt 122
                 a+e++++ l+ + ++le+++k  +e+ K+f    
  MMETSP1325-20131115|728_1 109 YACENVNKLLVGNKSDLESTRKVPTEQAKEFADSL 143
                5678999***********************97555 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00017      0.13      26      40 ..      11      25 ..       5      26 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00017
  PF13555.1 26 tlltGasGsGKSTll 40
                ll+G+sG+GKS ll
  MMETSP1325-20131115|728_1 11 LLLIGDSGVGKSCLL 25
               69**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       775  (0.0566852); expected 273.4 (0.02)
Passed bias filter:                      560  (0.0409596); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.71u 0.34s 00:00:01.05 Elapsed: 00:00:00.70
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|729_1  [L=472]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-06   26.7  29.3    0.00028   19.6  13.0    2.6  2  PF01757.17 Acyltransferase family


Domain annotation for each model (and alignments):
>> PF01757.17  Acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6  13.0   2.1e-08   0.00028      70     211 ..      36     201 ..      28     206 .. 0.75
   2 !   11.7   1.9   5.3e-06     0.072     245     307 ..     353     426 ..     316     446 .. 0.63

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 2.1e-08
                 xxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxx RF
  PF01757.17  70 lsklikrRilrll...ipfliwllliilliwlvaghiqanasanvtlfdet..............kglmfllfefpatghlWfLpalfvlylllplllrllrkvrsshllll..lilllllslvfirhel......fgpatsvgllplpsvla.......llfflfGallgdad 211
                 +  ++++R++rl    + +l+++++i++  +l+ g+   + + + + + ++              ++ ++  + ++++g++W+L+  +++++++p++l++    +++++ l+  l+ll+++s  +i + +                p + v +       ++++ fG++lg  +
   MMETSP1325-20131115|729_1  36 YLLAVVNRYFRLMpvyVTMLCVYVFITPHLNLILGEGPFWHAYQHSDALSFcyeywwvnmlflnnFLPWDVAGATTCVGWTWYLADDMQFFIITPPILAAYIYDKRLGCALVggLVLLTIVSTAYISNKFslscsnA--------DPDYNVYLyatpwcrVSPYAFGIILGLVY 201
                 566788999999988899999999999999999999988888888888777999999****9999********************************6666666666666661155555555555555554444443........33444333455556699*****9999766 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 5.3e-06
                 x..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01757.17 245 g..........gglvasvliqsasllllslgimllllllfalpsrsalk.pllrylgkiSygiYliHlpllmll 307
                 g           + +a+++ q  ++ + ++gi+  +++       + l+ p +  +gk+Syg Y+ Hl++l+++
   MMETSP1325-20131115|729_1 353 GalvgggkwtqSQRTAFNALQRSTFGASFVGIVYGMFCGDLPLIAKPLSlPMFESIGKLSYGAYMYHLVILQVY 426
                 03446655555566666777777777777777777777776666666669*****************8877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.39s 00:00:01.12 Elapsed: 00:00:01.23
# Mc/sec: 919.58
//
Query:       MMETSP1325-20131115|732_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   12.3   0.1       0.15   11.9   0.0    1.2  1  PF00511.12 E2 (early) protein, C terminal


Domain annotation for each model (and alignments):
>> PF00511.12  E2 (early) protein, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.1e-05      0.15       7      45 ..      35      72 ..      34      76 .] 0.85

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.1e-05
  PF00511.12  7 GdaNslKClRyRlkkkykklfkkisttwswtseksterk 45
                G +N  K l  R+ ++ + l   +  tw+w+++++t+++
   MMETSP1325-20131115|732_1 35 GASNAPKALSARV-ERTNALKAALLGTWRWIEHHRTTSQ 72
                899**********.88888999999*******8777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|736_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00069   19.0   0.0    0.00097   18.5   0.0    1.2  1  PF12106.3 Colicin C terminal ribonuclease domain


Domain annotation for each model (and alignments):
>> PF12106.3  Colicin C terminal ribonuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   7.1e-08   0.00097      11      33 ..      39      61 ..      37      62 .. 0.90

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 7.1e-08
  PF12106.3 11 sptkTiPDaltrNpSatVygkvv 33
               s++ + PD+lt +pSat +g+v 
  MMETSP1325-20131115|736_1 39 STNNAEPDKLTQLPSATIAGQVA 61
               788888***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 294.29
//
Query:       MMETSP1325-20131115|735_1  [L=344]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-34  119.9   0.0    1.3e-34  119.5   0.0    1.1  1  PF07159.7  Protein of unknown function (DUF1394)
  ------ inclusion threshold ------
       0.17   11.5   0.0       0.17   11.5   0.0    1.9  2  PF02199.10 Saposin A-type domain


Domain annotation for each model (and alignments):
>> PF07159.7  Protein of unknown function (DUF1394)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.5   0.0     2e-38   1.3e-34       3     293 ..      57     330 ..      55     338 .. 0.89

  Alignments for each domain:
  == domain 1    score: 119.5 bits;  conditional E-value: 2e-38
  PF07159.7   3 difldfenaqPteeerevy.eqvdevlkdaeaileelqaykGagkeireaiqnPadeklqekaweavvPlveklkrfyefslelekvlkkllealtsgkstPtqhlereqalakqlaeilefvlkfdelkmknPaiqndfsyyrrtlsrkrlnnvedaevevnnelanrmslfyaeatPllkvlseattkfvsenkslpienttdclstlanvcrvmletkeyssrfeseetllfclrvmvGviilydhvhPvGafvktskidikgcikvlkdqpaesvegllnalryttkh 293
                ++ ldf+n +P+++  e+  ++ + +l + ++ le++q+yk +++++++ai+ P+d +++  a  a+   +  +k +y+ s ++ ++l+++++++  gk      + ++  l+  l +++ fv +fd++k+ +  iqndfs yrr++++  l++   +e  +++  a  +s+f a++ P+   l  a      e k         +l+ l+n c  m+++ + ++ +  e  + +   vmvG iilyd     Gaf    ++ i  c  + k++    +  l  al+y t  
  MMETSP1325-20131115|735_1  57 SFKLDFDNVKPADTRSELDqDRWEGMLARIQTALEQIQNYKSCQDAVKKAIEAPKDAQINTDAAVALKDNILAIKSWYDLSEDMAAILPQMMTKIS-GK----GAITEDPELVAALGHLVAFVYRFDQAKLYESGIQNDFSGYRRVMNKCDLTQ---IELPLDESAASVVSMFVAQPGPFAHRLGVALKAVSAEGKA--------VLAELCNACCGMIDRSKGKAVL-PEPSVDLYRHVMVGCIILYDRSANSGAFSSR-EVAIVKCCTTAKKRGGVDTAKLCSALKYCTVN 330
                6789*************96156899******************************************************************99987.33....445667789999999*********************************999...599************************9886555555554........8999*************99955.5666667789******************865.67888888899999999999********9975 PP

>> PF02199.10  Saposin A-type domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.4      0.82   5.6e+03      19      24 ..     248     253 ..     247     254 .. 0.85
   2 ?   11.5   0.0   2.5e-05      0.17      16      29 ..     315     328 ..     313     331 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.82
  PF02199.10  19 AkeCnA 24 
                 A+ CnA
   MMETSP1325-20131115|735_1 248 AELCNA 253
                 889**9 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 2.5e-05
  PF02199.10  16 letAkeCnAveHCq 29 
                 ++tAk C A+++C+
   MMETSP1325-20131115|735_1 315 VDTAKLCSALKYCT 328
                 68***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.42s 00:00:01.10 Elapsed: 00:00:00.61
# Mc/sec: 1351.39
//
Query:       MMETSP1325-20131115|737_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   13.9   0.0      0.021   13.8   0.0    1.0  1  PF00069.20 Protein kinase domain
      0.088   13.0   0.0       0.13   12.5   0.0    1.3  1  PF05016.9  Plasmid stabilisation system protein


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   3.1e-06     0.021     205     260 .]      23      78 ..       6      78 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.1e-06
                 HHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 205 edqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 e  +  +e   ++ +  d +   s s+++k+++ ++l+ dp++Rl+ ++il++ w+
   MMETSP1325-20131115|737_1  23 EAIRDATEALTDPGVTDDDKPLPSLSDSAKSIVLDILKIDPKERLSSADILSNVWI 78 
                 444444444445555555555666679************************99886 PP

>> PF05016.9  Plasmid stabilisation system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     2e-05      0.13      11      41 ..       2      34 ..       1      44 [. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2e-05
               HHHHHC..........-.---CHH...HHHHHH CS
  PF05016.9 11 lkkiadyia.rdgp.aakrfldaleealellae 41
               + k++dy+  rd+    +r+ +a+++a+e+l +
  MMETSP1325-20131115|737_1  2 WVKAYDYTLmRDPVaFGERMEEAIRDATEALTD 34
               6699*********857**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.68
# Mc/sec: 292.50
//
Query:       MMETSP1325-20131115|733_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-32  112.7   0.0    1.3e-32  112.5   0.0    1.1  1  PF00227.21 Proteasome subunit


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.0   9.5e-37   1.3e-32       2     188 ..      30     212 ..      29     214 .. 0.90

  Alignments for each domain:
  == domain 1    score: 112.5 bits;  conditional E-value: 9.5e-37
                 HC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHH.HHHSSGGHHHHHHHHHHHHHHHHHH..HHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEE CS
  PF00227.21   2 kkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyr.lrygrpisverlvkrlaallqaytq..rsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknveva 188
                  +Gt+v+Gik++dgv+laad+  ++g   + k+ ++++  + + +++++ G+++D++++  ++++ ++  r +  g++ s++    +++ +l+a ++  r++++p+  +lli+g+  +g+ +l ++d++G+ + ++ +va+G g++ a ++l+k+++ d+++ ea el + +l+ +++rd+   ++v+va
   MMETSP1325-20131115|733_1  30 VTGTSVLGIKYRDGVMLAADTLCSYGTLAMFKD-AKRLTTVGETTIVGAGGEFSDFQQIQHMLEEITDDDRnYDDGYNHSPS----EIYHYLRAVMYqrRNKMNPLWNNLLIGGFK-DGEAFLGTVDMIGTAFTDE-FVATGFGAHLALPILRKRWHADMEEGEARELLEDCLRVLFYRDCRALNKVQVA 212
                 58***************************9999.7********************************987758899999999....666666554431155667888888888888.8889**************6.**************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 1046.83
//
Query:       MMETSP1325-20131115|739_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.5    5.7   6.8       0.75    8.7   1.3    2.0  2  PF05627.6 Cleavage site for pathogenic type III effector avirulence factor Avr


Domain annotation for each model (and alignments):
>> PF05627.6  Cleavage site for pathogenic type III effector avirulence factor Avr
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2      0.16   2.2e+03       8      13 ..      32      37 ..      30      37 .. 0.84
   2 ?    8.7   1.3   5.5e-05      0.75      12      25 ..      94     107 .]      93     107 .] 0.96

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.16
  PF05627.6  8 vPKFGe 13
               +P FG+
  MMETSP1325-20131115|739_1 32 LPTFGV 37
               899*96 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 5.5e-05
  PF05627.6  12 GeWDennpasAegF 25 
                G WDe + +s+++F
  MMETSP1325-20131115|739_1  94 GAWDESDDESGDDF 107
                99**********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 457.88
//
Query:       MMETSP1325-20131115|738_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-13   48.7   0.0    2.7e-12   46.4   0.0    1.9  1  PF01042.16 Endoribonuclease L-PSP


Domain annotation for each model (and alignments):
>> PF01042.16  Endoribonuclease L-PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.0     2e-16   2.7e-12       8     120 ..      64     199 ..      60     200 .. 0.85

  Alignments for each domain:
  == domain 1    score: 46.4 bits;  conditional E-value: 2e-16
                 TTT-BSEEEETTEEEE----SB-T...............TS-B--SSHHHHHHHHHHHHHHHHHHTT--GGG......EEEEEEEESSGGGHHHHHHHHHHHSSSS.....-.S.-EEEEEE-SB-GGG-SEEEEEEEE CS
  PF01042.16   8 aapYsqavkagnlvyvsGqlpldp..............etgelveedveeqtrqalenlkavLaaagaslsd......vvkvtvFladiedfaevnevyneafdee.....k.saParsavevaaLpkgakvEieaiav 120
                  a+Y+++   gnl+yvsGqlp+                ++g     ++ee+ ++a+ +   ++++++++++d      vvk+   ++++++f+e+  v+n+a+d       +   +arsa++ ++Lp g++ E+eai+ 
   MMETSP1325-20131115|738_1  64 KANYNSVSWDGNLLYVSGQLPVMGadgalltgtvgpagREG---YLTLEEGYQAARCCGLSIVSTIQSEIGDldrvekVVKLFGIVNSHPEFQEQHLVMNGASDLLcevfpDlPKHARSAIGTNTLPLGVATEVEAIVR 199
                 689***9999************9966667444333222222...2378999999999999999999999999*********************************9988763677**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.77
# Mc/sec: 628.65
//
Query:       MMETSP1325-20131115|741_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00026   20.4   3.8          1    9.5   1.5    3.6  2  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.019   14.8   4.2         13    6.1   1.3    3.6  2  PF13516.1  Leucine Rich repeat
      0.037   13.7   0.4      0.049   13.3   0.3    1.4  1  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
      0.039   13.8   5.5       0.58   10.0   0.6    2.9  3  PF05725.7  FNIP Repeat
      0.089   12.4   1.3       0.76    9.4   0.1    2.6  2  PF13855.1  Leucine rich repeat
      0.089   12.3   8.6       0.29   10.6   2.7    2.9  2  PF12799.2  Leucine Rich repeats (2 copies)
       0.15   11.8   0.5         10    5.9   0.0    2.7  3  PF08650.5  DASH complex subunit Dad4


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0     0.008        16       2      20 ..      10      29 ..       9      31 .. 0.84
   2 !    9.5   1.5   0.00053         1       1      17 [.      32      53 ..      32      80 .] 0.83

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.008
                ESEEEETSS.BCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppsls 20
                ++ L+L ++ +l+ ++   ++
   MMETSP1325-20131115|741_1 10 ITDLNLADCeKLEgNIEV-FK 29
                678**********99988.76 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00053
                TESEEEETSS.BCB.C...HHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.s...lpp 17
                n+e+L+L+g+ +l+ +   lp 
   MMETSP1325-20131115|741_1 32 NIETLNLQGCsKLQgNiknLPQ 53
                789**********988666544 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0      0.01        20       2      13 ..       8      19 ..       7      26 .. 0.84
   2 ?    6.1   1.3    0.0067        13       3      14 ..      32      43 ..      32      75 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.01
  PF13516.1  2 knLtsLdLsnNq 13
               +++t+L+L ++ 
  MMETSP1325-20131115|741_1  8 QSITDLNLADCE 19
               689*******95 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0067
  PF13516.1  3 nLtsLdLsnNqi 14
               n+++L+L+++  
  MMETSP1325-20131115|741_1 32 NIETLNLQGCSK 43
               89******9974 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   2.5e-05     0.049      43      97 ..      21      80 .]       1      80 [] 0.74

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.5e-05
  PF04513.7 43 ietqLnalse.dlksllaeldtrldtlltnLtdalnalq....dtlrneLtnlnsiltnL 97
               +e++++ +++ +++ l  +  ++l+ +++nL ++++ l+    ++l+ +L++l + +tnL
  MMETSP1325-20131115|741_1 21 LEGNIEVFKDmNIETLNLQGCSKLQGNIKNLPQSIADLNlafcEKLEGNLESLPKSVTNL 80
               44444444331455555555569****************999999999999999999997 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.012        23       9      22 ..       5      17 ..       2      25 .. 0.76
   2 ?    5.4   0.2    0.0081        16      13      41 ..      32      60 ..      31      63 .. 0.73
   3 ?   10.0   0.6    0.0003      0.58       7      39 ..      48      80 .]      45      80 .] 0.90

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.012
  PF05725.7  9 eLPsnleiLilgrd 22
                LP++++ L+l  d
  MMETSP1325-20131115|741_1  5 DLPQSITDLNL-AD 17
               58888888888.54 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0081
  PF05725.7 13 nleiLilgrdFnqkiligsLPnSlkeLyF 41
               n+e L+l    + + +i  LP+S+  L++
  MMETSP1325-20131115|741_1 32 NIETLNLQGCSKLQGNIKNLPQSIADLNL 60
               77888885555556669999999988876 PP

  == domain 3    score: 10.0 bits;  conditional E-value: 0.0003
  PF05725.7  7 igeLPsnleiLilgrdFnqkil..igsLPnSlkeL 39
               i  LP+++  L+l   F  k++    sLP+S++ L
  MMETSP1325-20131115|741_1 48 IKNLPQSIADLNL--AFCEKLEgnLESLPKSVTNL 80
               568**********..*******8888******987 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00039      0.76      26      59 ..       9      41 ..       2      44 .. 0.60
   2 ?    1.2   0.0      0.14   2.7e+02      10      20 ..      46      55 ..      43      77 .. 0.58

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00039
  PF13855.1 26 nLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
               + + L+L +++  + + e+fk++ +++ LnL+g+
  MMETSP1325-20131115|741_1  9 SITDLNLADCEKLEGNIEVFKDM-NIETLNLQGC 41
               44556666555555555666666.6666666665 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.14
  PF13855.1 10 nNrlkvipdga 20
               +N +k++p+++
  MMETSP1325-20131115|741_1 46 GN-IKNLPQSI 55
               55.55555432 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.6    0.0022       4.2       3      34 ..      10      41 ..       1      42 [. 0.69
   2 ?   10.6   2.7   0.00015      0.29       2      25 ..      32      65 ..      32      80 .] 0.76

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0022
  PF12799.2  3 LevLdLsnN.nIk.dlppelanLpnLktLnLsnN 34
                + L+L+++ +++ +++  ++ + n +tLnL+++
  MMETSP1325-20131115|741_1 10 ITDLNLADCeKLEgNIEV-FKDM-NIETLNLQGC 41
               455666666446655666.6666.9999999987 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00015
  PF12799.2  2 nLevLdLsnN.....nIkdlppelanLp.....n 25
               n e+L+L+++     nIk+lp ++a L+     +
  MMETSP1325-20131115|741_1 32 NIETLNLQGCsklqgNIKNLPQSIADLNlafceK 65
               89********888888999999998876444442 PP

>> PF08650.5  DASH complex subunit Dad4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.028        55      19      50 ..       2      31 ..       1      39 [. 0.74
   2 ?    5.9   0.0    0.0052        10      16      33 ..      44      61 ..      37      72 .. 0.82
   3 ?   -0.9   0.0      0.68   1.3e+03      18      30 ..      68      80 .]      60      80 .] 0.80

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.028
  PF08650.5 19 nvekLNesvatlNqeleevnkrNknlelvsqi 50
               n++ L +s++ lN  l +  k   n+e+  ++
  MMETSP1325-20131115|741_1  2 NLKDLPQSITDLN--LADCEKLEGNIEVFKDM 31
               889999****999..55556666666665555 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0052
  PF08650.5 16 IisnvekLNesvatlNqe 33
               + +n+++L +s+a lN  
  MMETSP1325-20131115|741_1 44 LQGNIKNLPQSIADLNLA 61
               5589***********965 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.68
  PF08650.5 18 snvekLNesvatl 30
               +n+e L +sv+ l
  MMETSP1325-20131115|741_1 68 GNLESLPKSVTNL 80
               6899999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.75
# Mc/sec: 255.61
//
Query:       MMETSP1325-20131115|743_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 314.01
//
Query:       MMETSP1325-20131115|742_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.72
# Mc/sec: 502.57
//
Query:       MMETSP1325-20131115|747_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-24   85.2   0.0    4.5e-24   85.0   0.0    1.0  1  PF00481.16 Protein phosphatase 2C
      0.004   16.7   0.0     0.0047   16.5   0.0    1.1  1  PF07228.7  Stage II sporulation protein E (SpoIIE)


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.0   0.0   6.6e-28   4.5e-24     157     257 .]      23     151 ..       9     151 .. 0.96

  Alignments for each domain:
  == domain 1    score: 85.0 bits;  conditional E-value: 6.6e-28
                 -EE-T--EE---BSBSB----HHHC---..................ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHHHHHHHHHHHHHHHT............HHHHHTS-SSHHHHHHHHHHHH CS
  PF00481.16 157 svsngngRvngsLavsRalGdfelkpke..................keqlvsaePdvtsvkideedefliLasDGlwdvlsdqeavdlvrselskkk............spmeaaeelvdeaiargsedni 257
                 +v    +Rv+g LavsR+lGd ++k+                    +  l  a+P+v+ v++ e def++LasDGlwdvl+  ++v+ v+++++++             + +e+a+el++ a++ gs+dni
   MMETSP1325-20131115|747_1  23 WVT--ITRVCGELAVSRSLGDPDFKDMAsqpecpffafpeghdrtfSTDLLLATPEVQRVELREGDEFVVLASDGLWDVLNIAQVVQTVKKMRNANAaaddgsgvervmTCDEIANELCRLALRLGSADNI 151
                 555..9*******************988******************888*********************************************998*********************************7 PP

>> PF07228.7  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   6.9e-07    0.0047     111     191 ..      68     157 ..      39     159 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 6.9e-07
                -.....----EEE------.EEEEE-----S--..HHHHHH....HHH.HHT----------HHHHHHHHHHH....HCT----S-EEEEEEE CS
  PF07228.7 111 e....adyeeaelqlepgd.llllyTDGvtEar..dpdgelfgkerll.allaeaegesleelldalveelle....lgsgeleDDitllvlr 191
                     a++e+++++l++gd  ++l++DG+ +    ++  ++ +k r + a++++ +g +   ++d++ +el +    l   + +D it++++ 
  MMETSP1325-20131115|747_1  68 TdlllATPEVQRVELREGDeFVVLASDGLWDVLniAQVVQTVKKMRNAnAAADDGSGVERVMTCDEIANELCRlalrL---GSADNITVILVV 157
                055558899********9846789*********664444555555555244444466666666777777777764324...599999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.69
# Mc/sec: 555.68
//
Query:       MMETSP1325-20131115|746_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.65
# Mc/sec: 840.57
//
Query:       MMETSP1325-20131115|751_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.2    7.9  13.3       0.17   11.4   0.6    2.2  2  PF11636.3 Troponin I residues 1-32


Domain annotation for each model (and alignments):
>> PF11636.3  Troponin I residues 1-32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.6   1.3e-05      0.17       9      25 ..       6      23 ..       3      27 .. 0.82
   2 ?    1.8   3.8     0.013   1.8e+02       8      21 ..      44      54 .]      36      54 .] 0.63

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.3e-05
  PF11636.3  9 pepPkP.pPvvaPPllRR 25
               ++  +P pP+ +P  +RR
  MMETSP1325-20131115|751_1  6 DKAGAPpPPALVPAQVRR 23
               566677699********9 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.013
  PF11636.3  8 vpepPkPpPvvaPP 21
               v+ pP P P   PP
  MMETSP1325-20131115|751_1 44 VETPPPPTP---PP 54
               566666644...33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.59
# Mc/sec: 219.33
//
Query:       MMETSP1325-20131115|750_1  [L=477]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-10   39.2   0.0    9.4e-10   38.3   0.0    1.3  1  PF00307.26 Calponin homology (CH) domain
  ------ inclusion threshold ------
      0.063   13.2   0.2       0.11   12.5   0.1    1.3  1  PF06395.6  CDC24 Calponin


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   1.4e-13   9.4e-10       5     104 ..      26     118 ..      23     122 .. 0.83

  Alignments for each domain:
  == domain 1    score: 38.3 bits;  conditional E-value: 1.4e-13
                 HHHHHHHHTTSTCTSSHSHHHHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS..-HHHHHTST-HHHHHHHHHHH CS
  PF00307.26   5 lrWinkvlekleqsrqvenlskdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvl..tledllysgnkknvlaflaeL 104
                  +Wi+ v+++       + + ++l+DG  L++ ++ ++ +   ++++  + ++ +++++eN++++l++a+  +g+ ++   ++ dl++  + ++v+ +l+++
   MMETSP1325-20131115|750_1  26 QTWIEAVTGEP----FSQPFAEELKDGSKLCNFINCIKAG--SVKKV--NTSKLAFKQMENITNFLKAAKG-MGLGQTDvfDTIDLYEARDLTKVVMCLHAF 118
                 57999999866....567899*******************..67999..444479************8887.555554444*****99**********9987 PP

>> PF06395.6  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.6e-05      0.11      10      84 ..      45     114 ..      39     118 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.6e-05
  PF06395.6  10 lrqGspLlvlfNalkpeeklevdevssddakkcKksvykFleackkeLgfedeelftisdlfsddttglvkvlkv 84 
                l+ Gs L+   N++k+ +  +v  ++s+ a k  +++ +Fl+a k  +g+ ++++f   dl++  + +l+kv+  
  MMETSP1325-20131115|750_1  45 LKDGSKLCNFINCIKAGSVKKV--NTSKLAFKQMENITNFLKAAK-GMGLGQTDVFDTIDLYE--ARDLTKVVMC 114
                789**************99999..667777777889*****9987.699************96..6788888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.36s 00:00:01.14 Elapsed: 00:00:00.90
# Mc/sec: 1270.07
//
Query:       MMETSP1325-20131115|745_1  [L=505]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-77  258.7   0.0    1.2e-76  257.9   0.0    1.4  1  PF01341.12 Glycosyl hydrolases family 6
    1.9e-08   33.6  13.6    1.9e-08   33.6   9.5    3.0  4  PF00734.13 Fungal cellulose binding domain


Domain annotation for each model (and alignments):
>> PF01341.12  Glycosyl hydrolases family 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.9   0.0   1.7e-80   1.2e-76       1     291 [.      34     379 ..      34     387 .. 0.92

  Alignments for each domain:
  == domain 1    score: 257.9 bits;  conditional E-value: 1.7e-80
  PF01341.12   1 vnpkysaeveaaaaklsaalaakaekvakvptavWldriaavse.vekeladalaaakaagk..vvvlvvYdlPdRDCaalaSnGe...................gaaslakYke.yidaiaaglkky.gderivvvlEpDsLanlvtnlnvekCakakaaaeykellayalkklgalp.nvavYlDaghsgWlgwdanlepaaellaevlkkagveakvrGfatnvsNyqat..................................edetaYaealasaleaa..gfgakfviDtsRnGvgptrrkeagdWCnpkgaglGerptant.gdplvdaylWiKppGeSDGtsegs 291
                 vnp+y +e + ++   s++ ++  +++++vp+a+W+d  +++++  ++ ++ +l++a+++++  +v+l+vYdlP+RDC+a+aSnGe                    +++l++Y + yid++a+ l+++ g+++iv+++EpDsLan+ tn++  +Ca++  a++y+ ++ ya+k+l+++    + Y+Da+h gWlgw++      + + +++k+ g+e+++rGfatnv+Nyq++                                  ++e++Y++ l++a++a+   f+ +f+iD++RnGv  + r++  +WCn +gag+G  pt++t + ++vday W+K+pGeSDG+++  
   MMETSP1325-20131115|745_1  34 VNPSYVTELQGSIDTASGTVKQTLKSMKDVPSAYWIDVKSKITGnGTSSVQGILSDAASQSTppLVTLIVYDLPNRDCKAKASNGEicciynddgtcdydtnpgtCDDGLKEYYDdYIDPFASVLSDFeGKVPIVLIIEPDSLANMATNMADTHCANS--ASAYETGIPYAIKTLKTACpSCSLYMDAAHGGWLGWEDG----YTSFVSLVKDLGIETYLRGFATNVANYQTIgtqcasdvdciqgpgkddpccadpcglltqynraNNEMNYVKILKTAMTASmpSFEPHFIIDSGRNGVADM-RNDCANWCNARGAGVGLIPTTETnNPANVDAYFWLKTPGESDGCTQYT 379
                 79*************************************9999856678899999888888888************************************9998877888888877*********98835789**********************999..9**************87645****************887....899999******************************************************************9999998752245899************5.***********************44568***************96433 PP

>> PF00734.13  Fungal cellulose binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       0.9   6.1e+03      13      20 ..     136     143 ..     132     144 .. 0.76
   2 ?   -2.7   0.1      0.64   4.4e+03      14      22 ..     262     270 ..     260     272 .. 0.74
   3 ?   -5.8   1.7         2   1.4e+04      15      20 ..     280     285 ..     279     286 .. 0.81
   4 !   33.6   9.5   2.8e-12   1.9e-08       1      29 []     468     495 ..     468     495 .. 0.98

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 0.9
  PF00734.13  13 pttCasGy 20 
                 p tC  G 
   MMETSP1325-20131115|745_1 136 PGTCDDGL 143
                 78999886 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.64
  PF00734.13  14 ttCasGytC 22 
                 t+Cas   C
   MMETSP1325-20131115|745_1 262 TQCASDVDC 270
                 889986666 PP

  == domain 3    score: -5.8 bits;  conditional E-value: 2
  PF00734.13  15 tCasGy 20 
                 +Ca ++
   MMETSP1325-20131115|745_1 280 CCADPC 285
                 999985 PP

  == domain 4    score: 33.6 bits;  conditional E-value: 2.8e-12
  PF00734.13   1 lwgQCGGigwtGpttCasGytCvklNdyY 29 
                 l+ QCGGigwtG+ttC +G tC++ +dyY
   MMETSP1325-20131115|745_1 468 LYTQCGGIGWTGATTCCEG-TCTSSGDYY 495
                 599****************.********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.31s 00:00:01.14 Elapsed: 00:00:00.84
# Mc/sec: 1440.67
//
Query:       MMETSP1325-20131115|754_1  [L=343]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-14   52.6  13.4      3e-14   52.6   9.3    2.3  2  PF02135.11 TAZ zinc finger
    0.00098   18.4  10.7    0.00098   18.4   7.4    2.3  2  PF00569.12 Zinc finger, ZZ type


Domain annotation for each model (and alignments):
>> PF02135.11  TAZ zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   2.9         2   1.4e+04      11      55 ..     108     125 ..      98     155 .. 0.51
   2 !   52.6   9.3   4.3e-18     3e-14       5      75 .]     188     257 ..     184     257 .. 0.95

  Alignments for each domain:
  == domain 1    score: -4.6 bits;  conditional E-value: 2
  PF02135.11  11 lHakkCkkre.eakCklkaCkklkkllkHlksCkkkkckvgrCass 55 
                  H+++   ++                              ++C+++
   MMETSP1325-20131115|754_1 108 YHIHNPDMPKfL----------------------------QSCSQC 125
                 444443333322............................222222 PP

  == domain 2    score: 52.6 bits;  conditional E-value: 4.3e-18
  PF02135.11   5 eqlelLlHakkCkkreeakCklkaCkklkkllkHlksCkkkkckvgrCasskqlik....HakeCkdseCpvclc 75 
                   ++lL Ha+ C++   ++C + +C+k+k+ll H ++C++k    g+C+ ++++++    Ha++C++ +C+v++c
   MMETSP1325-20131115|754_1 188 LHMQLLQHASGCNS---SSCPSANCEKMKNLLAHGSKCTVKV--QGGCNVCRRIWAllqiHARQCRRDTCAVPKC 257
                 5799**********...89**********************9..9****************************98 PP

>> PF00569.12  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   7.4   1.4e-07   0.00098       6      45 ..     121     160 ..     117     161 .. 0.89
   2 ?   -1.1   0.1      0.18   1.3e+03       7      12 ..     230     235 ..     225     248 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.4e-07
                 E-TTT-S..EESSEEEESSSSS-EE-HHHHHH..H---SS CS
  PF00569.12   6 kCniCkecpiigvRyhclkcsdYDLCqsCfstGrkakkhk 45 
                 +C +C+     g Ry c +c dY LC  C  +   +++h+
   MMETSP1325-20131115|754_1 121 SCSQCGLEINQGYRYDCPQCTDYHLCGDCCHQWGSQHPHR 160
                 7******77889*****************99977888886 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.18
                 -TTT-S CS
  PF00569.12   7 CniCke 12 
                 Cn+C  
   MMETSP1325-20131115|754_1 230 CNVCRR 235
                 9*9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       992  (0.0725571); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.36s 00:00:01.03 Elapsed: 00:00:00.72
# Mc/sec: 1141.60
//
Query:       MMETSP1325-20131115|755_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.039   13.5   0.1      0.039   13.5   0.1    1.1  1  PF06544.7 Protein of unknown function (DUF1115)


Domain annotation for each model (and alignments):
>> PF06544.7  Protein of unknown function (DUF1115)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   2.9e-06     0.039      46      68 ..      11      33 ..       8      64 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.9e-06
  PF06544.7 46 ekavkeykrlmlkrikWeeskkv 68
               e+av++y++lm+ r+ W+   k 
  MMETSP1325-20131115|755_1 11 ESAVRRYMQLMTVRMAWAWRSKA 33
               899**************544333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|756_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00068   18.7   0.0    0.00072   18.6   0.0    1.0  1  PF00450.17 Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> PF00450.17  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   5.2e-08   0.00072     278     327 ..       5      54 ..       1      60 [. 0.75

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 5.2e-08
                 HHHHHHCSCCHHHH--...--SSS--S--HHH.......HHT---TT.S-TCHHHHH CS
  PF00450.17 278 avekylnreeVrkalhvnkaevkeweecndev.......feqtgddvsksveeilek 327
                  v+++ n++eV++a +++++e++e+ +c++ev       f       ++++e+ + +
   MMETSP1325-20131115|756_1   5 LVNEWGNQPEVQRAFGLPEDEDIEYHACSKEVylrflfdF-------MQDYEDAMAE 54 
                 6899****************************55544433.......4444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|756_2  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.65
# Mc/sec: 228.58
//
Query:       MMETSP1325-20131115|758_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.60
# Mc/sec: 523.20
//
Query:       MMETSP1325-20131115|760_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-42  141.6  13.8    5.1e-11   42.5   0.1    6.3  5  PF00415.13 Regulator of chromosome condensation (RCC1) repeat
    1.2e-33  113.9  18.2    9.3e-09   34.5   0.3    4.5  4  PF13540.1  Regulator of chromosome condensation (RCC1) repeat
  ------ inclusion threshold ------
      0.032   14.2   0.3         21    5.3   0.0    3.3  3  PF07646.10 Kelch motif
       0.15    9.7   0.0       0.25    9.0   0.0    1.2  1  PF03557.10 Bunyavirus glycoprotein G1
       0.16   12.4   1.3       0.46   11.0   0.6    1.9  2  PF12764.2  Glycine-rich region of argonaut


Domain annotation for each model (and alignments):
>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0011       2.9      38      51 .]       6      19 ..       2      19 .. 0.88
   2 !   30.5   1.2   9.9e-11   2.7e-07       1      51 []      22     113 ..      22     113 .. 0.94
   3 !   42.5   0.1   1.9e-14   5.1e-11       1      51 []     116     171 ..     116     171 .. 0.89
   4 !   30.9   0.0   7.8e-11   2.1e-07       6      51 .]     179     221 ..     175     221 .. 0.95
   5 !   31.3   0.0   5.7e-11   1.5e-07       1      50 [.     224     272 ..     224     273 .. 0.91

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0011
                --EEE-----EEEE CS
  PF00415.13 38 vvqvacGgsHtlal 51
                ++q acGg H++a+
   MMETSP1325-20131115|760_1  6 AKQLACGGMHSAAV 19
                6899********97 PP

  == domain 2    score: 30.5 bits;  conditional E-value: 9.9e-11
                 TTEEEEE---------....................--------S-EE-GGG--......................----EEE-----EEEE CS
  PF00415.13   1 dGrVysWGrndyGqLG...................kggseenvlvPvkveglsg......................vrvvqvacGgsHtlal 51 
                 +G+Vy+WGr d GqLG                       ++  ++P+ v   +g                       +v +v+cG++Ht+a+
   MMETSP1325-20131115|760_1  22 NGKVYCWGRADSGQLGiakrwthssqdvhaqesaeDRALTSCMCYPQEVLVGRGakkqrggaegdgdgdgsvgsedDPVASVSCGAFHTAAV 113
                 69***************************9999887778888899999999999************************************97 PP

  == domain 3    score: 42.5 bits;  conditional E-value: 1.9e-14
                 TTEEEEE---------......--------S-EE-GGG------EEE-----EEEE CS
  PF00415.13   1 dGrVysWGrndyGqLG.....kggseenvlvPvkveglsgvrvvqvacGgsHtlal 51 
                 +Gr++sWG+ ++G+LG       +  + v  P  ve+++gv + +vacGg+Htla+
   MMETSP1325-20131115|760_1 116 QGRLFSWGKEEFGCLGvqltnDFKKGSGVYNPLEVELPRGVAIASVACGGNHTLAI 171
                 59***************97765555666789*99********************97 PP

  == domain 4    score: 30.9 bits;  conditional E-value: 7.8e-11
                 EE---------.--------S-EE-GGG------EEE-----EEEE CS
  PF00415.13   6 sWGrndyGqLGkggseenvlvPvkveglsgvrvvqvacGgsHtlal 51 
                 ++G+n+yG+LG +g+  n+l  + +e+++   v q+acGgsH+l++
   MMETSP1325-20131115|760_1 179 ACGKNEYGRLG-LGDMTNRLFMCELELPEP--VEQAACGGSHSLLV 221
                 79*********.******************..***********975 PP

  == domain 5    score: 31.3 bits;  conditional E-value: 5.7e-11
                 TTEEEEE---------.--------S-EE-GGG------EEE-----EEE CS
  PF00415.13   1 dGrVysWGrndyGqLGkggseenvlvPvkveglsgvrvvqvacGgsHtla 50 
                 +G+Vy++Gr+++G+LG +g+e++   P +ve   ++rv +v++  s  +a
   MMETSP1325-20131115|760_1 224 SGKVYACGRGEFGRLG-TGTERDYAAPLLVEPCVSKRVDSVVAAVSTHFA 272
                 69**************.******************999999987766665 PP

>> PF13540.1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   1.3   5.1e-10   1.4e-06       2      30 .]       7      35 ..       6      35 .. 0.97
   2 !   34.5   0.3   3.4e-12   9.3e-09       1      30 []     100     129 ..     100     129 .. 0.97
   3 !   33.3   0.1     8e-12   2.2e-08       1      29 [.     158     186 ..     158     187 .. 0.96
   4 !   28.6   0.2   2.5e-10   6.9e-07       1      29 [.     208     236 ..     208     237 .. 0.95

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 5.1e-10
               -EEE-----EEEE-.---EEEE---TTST CS
  PF13540.1  2 vsvsaGgyHtcaLtsdGaVlcWGsNssGQ 30
               +++++Gg H+ a+ ++G+V+cWG+ +sGQ
  MMETSP1325-20131115|760_1  7 KQLACGGMHSAAVGENGKVYCWGRADSGQ 35
               89**************************9 PP

  == domain 2    score: 34.5 bits;  conditional E-value: 3.4e-12
                --EEE-----EEEE-.---EEEE---TTST CS
  PF13540.1   1 VvsvsaGgyHtcaLtsdGaVlcWGsNssGQ 30 
                V+svs+G++Ht a+ts G++++WG  ++G+
  MMETSP1325-20131115|760_1 100 VASVSCGAFHTAAVTSQGRLFSWGKEEFGC 129
                89*************************998 PP

  == domain 3    score: 33.3 bits;  conditional E-value: 8e-12
                --EEE-----EEEE-.---EEEE---TTS CS
  PF13540.1   1 VvsvsaGgyHtcaLtsdGaVlcWGsNssG 29 
                ++sv++Gg+Ht+a+t+ G+ +++G N++G
  MMETSP1325-20131115|760_1 158 IASVACGGNHTLAITTAGKAMACGKNEYG 186
                68**************************9 PP

  == domain 4    score: 28.6 bits;  conditional E-value: 2.5e-10
                --EEE-----EEEE-.---EEEE---TTS CS
  PF13540.1   1 VvsvsaGgyHtcaLtsdGaVlcWGsNssG 29 
                V++ ++Gg+H++ +t +G+V+++G++++G
  MMETSP1325-20131115|760_1 208 VEQAACGGSHSLLVTKSGKVYACGRGEFG 236
                7899**********************999 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0075        21       4      20 ..      15      31 ..      13      54 .. 0.73
   2 ?    4.9   0.0      0.01        27       4      19 ..     109     124 ..     108     149 .. 0.81
   3 ?   -1.4   0.0      0.97   2.7e+03      18      37 ..     214     230 ..     212     235 .. 0.57

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0075
  PF07646.10  4 ghsavvpggkiyvvGGa 20
                + +av  +gk+y +G a
   MMETSP1325-20131115|760_1 15 HSAAVGENGKVYCWGRA 31
                4566677*********9 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.01
  PF07646.10   4 ghsavvpggkiyvvGG 19 
                 +++av+++g+++++G 
   MMETSP1325-20131115|760_1 109 HTAAVTSQGRLFSWGK 124
                 6899***********5 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.97
  PF07646.10  18 GGahtdngllsssdlnvldp 37 
                 GG+   + ll++ +  v+ +
   MMETSP1325-20131115|760_1 214 GGS---HSLLVTKSGKVYAC 230
                 676...55555555555544 PP

>> PF03557.10  Bunyavirus glycoprotein G1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0     9e-05      0.25     550     568 ..     115     133 ..     109     139 .. 0.89

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 9e-05
  PF03557.10 550 skertsrWGceefGCLais 568
                 s+ r  +WG eefGCL ++
   MMETSP1325-20131115|760_1 115 SQGRLFSWGKEEFGCLGVQ 133
                 899999**********986 PP

>> PF12764.2  Glycine-rich region of argonaut
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.6   0.00017      0.46       9      42 ..      72     105 ..      65     118 .. 0.68
   2 ?   -1.7   0.0       1.5   4.1e+03      24      64 ..     241     257 ..     224     282 .. 0.51

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00017
  PF12764.2   9 rGRGgppqqgGrggygggrggsvPsaggpsrpsv 42 
                 GRG ++q+gG  g g+g g+ +    + ++ s 
  MMETSP1325-20131115|760_1  72 VGRGAKKQRGGAEGDGDGDGSVGSEDDPVASVSC 105
                4***********9999998887333333334444 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 1.5
  PF12764.2  24 gggrggsvPsaggpsrpsvPeLhQAtqapyqaavssqpaps 64 
                g                        t+  y a++  +p  s
  MMETSP1325-20131115|760_1 241 G------------------------TERDYAAPLLVEPCVS 257
                3........................3333444333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.39s 00:00:00.99 Elapsed: 00:00:00.56
# Mc/sec: 1292.32
//
Query:       MMETSP1325-20131115|753_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-12   45.8   0.6    1.5e-05   23.8   0.0    3.0  3  PF04712.7 Radial spokehead-like protein


Domain annotation for each model (and alignments):
>> PF04712.7  Radial spokehead-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   1.1e-09   1.5e-05     128     172 ..      12      57 ..       3      62 .. 0.91
   2 !    2.4   0.0    0.0035        48     222     260 ..      71     110 ..      68     176 .. 0.75
   3 !   16.8   0.2   1.4e-07     0.002     386     453 ..     215     276 ..     113     293 .. 0.78

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 1.1e-09
  PF04712.7 128 aGvglseeeafrlalalkqLaeekkl.stvRFwGkilgtkkdYyva 172
                 G++ls ee   l++++  ++++++l +++ FwGki+g  +dY++a
  MMETSP1325-20131115|753_1  12 SGYTLSIEEKSALQVSMLAIQRKENLpNKLVFWGKIMGETNDYLIA 57 
                699********************9995679***************8 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.0035
  PF04712.7 222 Yyvttslg.deWvrLPdVtPqqivvsRqikkffTGdLdap 260
                +y++t++   ++v++P  +P+  ++s +ik  f G+ +a 
  MMETSP1325-20131115|753_1  71 FYYCTTANmSTLVQMPILSPEWKELSAAIKLPFRGEPSAL 110
                5555555549***********9999999999999986665 PP

  == domain 3    score: 16.8 bits;  conditional E-value: 1.4e-07
  PF04712.7 386 lLtpiseDaeleeakpaWtlrlssseskkervvvlrslvWPGavtva..egkkfesiYiGwGlKktqenf 453
                +L pi+eDa+       W+        +++ + +lrs +WPG + +   e+ ++  +YiG Gl + +  f
  MMETSP1325-20131115|753_1 215 FLDPIAEDAPA----GVWSQFYD----SSSTMSLLRSFYWPGYFFYHvcETGEYGGVYIGDGLANEDLPF 276
                44555555322....23443333....3478999********9877655999**********98877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.32s 00:00:00.96 Elapsed: 00:00:00.70
# Mc/sec: 1187.91
//
Query:       MMETSP1325-20131115|761_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-34  117.5   4.2      4e-13   48.7   0.1    3.0  4  PF13855.1  Leucine rich repeat
      1e-11   44.0   0.0    1.1e-05   24.8   0.0    3.4  4  PF12799.2  Leucine Rich repeats (2 copies)
    1.3e-08   33.6   0.0        1.4    9.0   0.0    5.4  6  PF00560.28 Leucine Rich Repeat
    2.7e-06   27.0   0.0    3.5e-06   26.6   0.0    1.1  1  PF13306.1  Leucine rich repeats (6 copies)
    0.00039   20.0   0.1         17    5.7   0.0    4.2  4  PF13516.1  Leucine Rich repeat
     0.0085   16.0   1.0         33    5.1   0.0    4.1  5  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.023   14.8  13.7      0.062   13.4   8.7    2.4  2  PF00066.12 LNR domain


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.1   2.3e-13   4.6e-10      10      61 .]       1      53 [.       1      53 [. 0.96
   2 !   48.7   0.1   2.1e-16     4e-13       3      60 ..      18      76 ..      16      77 .. 0.95
   3 !   35.9   0.0   2.1e-12     4e-09       3      60 ..      43     101 ..      43     102 .. 0.94
   4 !   11.7   0.0   7.7e-05      0.15      17      45 ..      82     110 ..      79     114 .. 0.91

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 2.3e-13
  PF13855.1 10 nNrlkvipdgaFkglsnLkvLdLsgnnl.ksispeafkgLpsLreLnLsgNrl 61
               nNrl+v+p g+F +l  L +L L +n+   ++++++f+gL+sLr L+L+++++
  MMETSP1325-20131115|761_1  1 NNRLSVLPVGVFDKLRMLGTLHLANNEDlAELPSGLFDGLRSLRALDLRHTSI 53
               79**********************999967********************987 PP

  == domain 2    score: 48.7 bits;  conditional E-value: 2.1e-16
  PF13855.1  3 LkeLdLsnN.rlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNr 60
               L +L+L nN +l ++p g F gl +L+ LdL ++++k+i + +f g+p+L +++Ls+ +
  MMETSP1325-20131115|761_1 18 LGTLHLANNeDLAELPSGLFDGLRSLRALDLRHTSIKNITSATFRGMPHLASIDLSYAN 76
               679*****************************************************966 PP

  == domain 3    score: 35.9 bits;  conditional E-value: 2.1e-12
  PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlk.sispeafkgLpsLreLnLsgNr 60 
                L+ LdL+++++k+i   +F g+++L ++dLs+ n++  + +++f++ + L++++L gN+
  MMETSP1325-20131115|761_1  43 LRALDLRHTSIKNITSATFRGMPHLASIDLSYANISdPVRKGTFAQNTELKYVSLAGNS 101
                899********************************6378889****************7 PP

  == domain 4    score: 11.7 bits;  conditional E-value: 7.7e-05
  PF13855.1  17 pdgaFkglsnLkvLdLsgnnlksispeaf 45 
                ++g+F + + Lk+ +L gn+   i+++af
  MMETSP1325-20131115|761_1  82 RKGTFAQNTELKYVSLAGNSFGDIEAGAF 110
                6899**********************999 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0048       9.5      10      35 ..       1      27 [.       1      37 [. 0.77
   2 !   19.3   0.4   2.9e-07   0.00056       3      40 ..      18      57 ..      14      58 .. 0.88
   3 !   24.8   0.0   5.5e-09   1.1e-05       2      38 ..      42      79 ..      41      82 .. 0.94
   4 !    8.7   0.0   0.00059       1.1      19      41 ..      85     107 ..      83     109 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0048
  PF12799.2 10 nNnIkdlpp.elanLpnLktLnLsnNp 35
               nN+++ lp  ++ +L+ L tL+L+nN 
  MMETSP1325-20131115|761_1  1 NNRLSVLPVgVFDKLRMLGTLHLANNE 27
               788999997358899999999999995 PP

  == domain 2    score: 19.3 bits;  conditional E-value: 2.9e-07
  PF12799.2  3 LevLdLsnNn.Ikdlppe.lanLpnLktLnLsnNpisdls 40
               L +L L+nN  + +lp   + +L++L+ L+L ++ i +++
  MMETSP1325-20131115|761_1 18 LGTLHLANNEdLAELPSGlFDGLRSLRALDLRHTSIKNIT 57
               67999****66*****972589**************9986 PP

  == domain 3    score: 24.8 bits;  conditional E-value: 5.5e-09
  PF12799.2  2 nLevLdLsnNnIkdlpp.elanLpnLktLnLsnNpisd 38
               +L+ LdL++++Ik++   ++ ++p L +++Ls+ +isd
  MMETSP1325-20131115|761_1 42 SLRALDLRHTSIKNITSaTFRGMPHLASIDLSYANISD 79
               7999***********8769******************9 PP

  == domain 4    score: 8.7 bits;  conditional E-value: 0.00059
  PF12799.2  19 elanLpnLktLnLsnNpisdlsa 41 
                ++a+ + Lk+ +L++N + d++a
  MMETSP1325-20131115|761_1  85 TFAQNTELKYVSLAGNSFGDIEA 107
                57888999999999999999986 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.057   1.1e+02       9      22 .]       1      15 [.       1      15 [. 0.90
   2 !    6.1   0.0    0.0066        13       4      22 .]      20      40 ..      18      40 .. 0.91
   3 !    9.0   0.0   0.00073       1.4       1      21 [.      42      63 ..      42      64 .. 0.89
   4 ?    2.2   0.0      0.13   2.5e+02       1      17 [.      66      83 ..      66      89 .. 0.73
   5 !    5.7   0.0    0.0091        18       2      20 ..      92     111 ..      91     113 .. 0.88
   6 ?   -2.7   0.0       5.4   1.1e+04       5      14 ..     117     126 ..     116     138 .. 0.72

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.057
                SSBCBCHHHH.HHHH CS
  PF00560.28  9 gNnltslpps.lsnL 22
                +N+l+ lp + + +L
   MMETSP1325-20131115|761_1  1 NNRLSVLPVGvFDKL 15
                79*******999886 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0066
                EEEETSS.BCBCHHHH.HHHH CS
  PF00560.28  4 eLdLsgN.nltslpps.lsnL 22
                +L+L +N  l +lp++ + +L
   MMETSP1325-20131115|761_1 20 TLHLANNeDLAELPSGlFDGL 40
                79*************999876 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.00073
                TESEEEETSSBCBCHHHH.HHH CS
  PF00560.28  1 nLeeLdLsgNnltslpps.lsn 21
                +L+ LdL++++++++ +  +++
   MMETSP1325-20131115|761_1 42 SLRALDLRHTSIKNITSAtFRG 63
                69*************9988876 PP

  == domain 4    score: 2.2 bits;  conditional E-value: 0.13
                TESEEEETSSBCB.CHHH CS
  PF00560.28  1 nLeeLdLsgNnlt.slpp 17
                +L ++dLs+ n++  + +
   MMETSP1325-20131115|761_1 66 HLASIDLSYANISdPVRK 83
                57899****999944555 PP

  == domain 5    score: 5.7 bits;  conditional E-value: 0.0091
                 ESEEEETSSBCBCHHHH.HH CS
  PF00560.28   2 LeeLdLsgNnltslpps.ls 20 
                 L++ +L gN++ ++  + ++
   MMETSP1325-20131115|761_1  92 LKYVSLAGNSFGDIEAGaFG 111
                 99***********9987775 PP

  == domain 6    score: -2.7 bits;  conditional E-value: 5.4
                 EEETSSBCBC CS
  PF00560.28   5 LdLsgNnlts 14 
                   L g+ lt+
   MMETSP1325-20131115|761_1 117 VWLTGTGLTC 126
                 6788888885 PP

>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   1.8e-09   3.5e-06      26     125 ..       7     113 ..       1     115 [. 0.81

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 1.8e-09
  PF13306.1  26 IgeyaFsncsslksitlpss..lteigeyaFsncssltsitips.sltsigenaFsncsslksinips.slt.tigssaFsn.cslksitip.ssvteigsnaFsnc 125
                +   +F + + l +++l ++  l e+ +  F++ +sl  +++   s+++i + +F+++ +l si+++  +++  + +  F++ ++lk++ +  +s+ +i+  aF ++
  MMETSP1325-20131115|761_1   7 LPVGVFDKLRMLGTLHLANNedLAELPSGLFDGLRSLRALDLRHtSIKNITSATFRGMPHLASIDLSYaNISdPVRKGTFAQnTELKYVSLAgNSFGDIEAGAFGDS 113
                556789999889999997766699*********99******97559******************998634443799999977359**99987368999999999765 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.85   1.7e+03       6      12 ..      20      26 ..      14      32 .. 0.82
   2 ?    3.6   0.0     0.043        84       1      16 [.      40      55 ..      40      61 .. 0.83
   3 !    5.7   0.0    0.0087        17       1      16 [.      64      79 ..      64      82 .. 0.91
   4 ?    4.7   0.0     0.018        35       3      23 ..      91     111 ..      89     112 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.85
  PF13516.1  6 sLdLsnN 12
               +L+L nN
  MMETSP1325-20131115|761_1 20 TLHLANN 26
               8999999 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.043
  PF13516.1  1 lknLtsLdLsnNqigd 16
               l +L+ LdL ++ i +
  MMETSP1325-20131115|761_1 40 LRSLRALDLRHTSIKN 55
               5799*******99976 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.0087
  PF13516.1  1 lknLtsLdLsnNqigd 16
               +++L s+dLs+ +i+d
  MMETSP1325-20131115|761_1 64 MPHLASIDLSYANISD 79
               58999*********99 PP

  == domain 4    score: 4.7 bits;  conditional E-value: 0.018
  PF13516.1   3 nLtsLdLsnNqigdeGlsaLa 23 
                 L++  L +N +gd+ + a++
  MMETSP1325-20131115|761_1  91 ELKYVSLAGNSFGDIEAGAFG 111
                588999********9998875 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       6.7   1.3e+04      10      17 .]       1       8 [.       1       8 [. 0.74
   2 ?    5.1   0.0     0.017        33       3      17 .]      18      33 ..      16      33 .. 0.89
   3 ?    5.0   0.0     0.019        38       2      15 ..      42      55 ..      41      58 .. 0.84
   4 ?   -1.3   0.0       2.2   4.4e+03       1      13 [.      65      77 ..      65      79 .. 0.77
   5 ?    1.0   0.0      0.41     8e+02       3      16 ..      92     105 ..      90     106 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 6.7
  PF13504.1 10 gnrLtsLP 17
               +nrL  LP
  MMETSP1325-20131115|761_1  1 NNRLSVLP 8 
               68888776 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.017
  PF13504.1  3 LkeLdLsgnr.LtsLP 17
               L +L+L++n+ L +LP
  MMETSP1325-20131115|761_1 18 LGTLHLANNEdLAELP 33
               668******9999998 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.019
  PF13504.1  2 nLkeLdLsgnrLts 15
               +L+ LdL++++++ 
  MMETSP1325-20131115|761_1 42 SLRALDLRHTSIKN 55
               8********99865 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 2.2
  PF13504.1  1 pnLkeLdLsgnrL 13
               p+L   dLs+ ++
  MMETSP1325-20131115|761_1 65 PHLASIDLSYANI 77
               6888999998665 PP

  == domain 5    score: 1.0 bits;  conditional E-value: 0.41
  PF13504.1   3 LkeLdLsgnrLtsL 16 
                Lk+ +L+gn++ ++
  MMETSP1325-20131115|761_1  92 LKYVSLAGNSFGDI 105
                78889****98765 PP

>> PF00066.12  LNR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.8   1.1e+04      30      35 ..      35      40 ..      33      40 .. 0.74
   2 ?   13.4   8.7   3.2e-05     0.062      14      38 .]     150     178 ..     135     178 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 5.8
                CTT--- CS
  PF00066.12 30 CqfDGg 35
                 +fDG+
   MMETSP1325-20131115|761_1 35 GLFDGL 40
                58**95 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 3.2e-05
                 HTTT-------....--SCCCTT---TT- CS
  PF00066.12  14 kkfgdgvCDee....CnnaeCqfDGgDCs 38 
                 ++ gdg+CD       ++a+C++DGgDC+
   MMETSP1325-20131115|761_1 150 SWLGDGWCDSSwdpkYDTADCLWDGGDCT 178
                 467*****987666699***********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.78
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|762_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.61
# Mc/sec: 675.69
//
Query:       MMETSP1325-20131115|763_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       653  (0.0477618); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 565.18
//
Query:       MMETSP1325-20131115|764_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 510.34
//
Query:       MMETSP1325-20131115|767_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 235.43
//
Query:       MMETSP1325-20131115|767_2  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0093   15.8   0.0          2    8.6   0.0    2.6  3  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00014         2       9      24 .]       4      19 ..       3      19 .. 0.92
   2 !    4.4   0.0    0.0033        45       4      24 .]      24      44 ..      21      44 .. 0.83
   3 ?   -1.4   0.0      0.25   3.4e+03       5      10 ..      50      55 ..      46      56 .] 0.80

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00014
  PF13516.1  9 LsnNqigdeGlsaLan 24
               L+n+q++d+G+  Lan
  MMETSP1325-20131115|767_2  4 LQNTQVTDIGVIELAN 19
               89**********9997 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0033
  PF13516.1  4 LtsLdLsnNqigdeGlsaLan 24
                t ++L n+ ++d  +  Lan
  MMETSP1325-20131115|767_2 24 TTIIQLRNTRVSDASVVVLAN 44
               567899********9999986 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.25
  PF13516.1  5 tsLdLs 10
               t++dLs
  MMETSP1325-20131115|767_2 50 TTFDLS 55
               789998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.62
# Mc/sec: 216.45
//
Query:       MMETSP1325-20131115|752_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.67
# Mc/sec: 1144.53
//
Query:       MMETSP1325-20131115|766_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-14   53.1   0.0    2.4e-14   52.8   0.0    1.1  1  PF02089.10 Palmitoyl protein thioesterase
    7.6e-06   25.2   0.0    1.4e-05   24.3   0.0    1.4  1  PF05057.9  Putative serine esterase (DUF676)
     0.0004   20.2   0.1    0.00055   19.7   0.1    1.4  1  PF12697.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
       0.14   12.0   0.3        0.3   11.0   0.2    1.6  1  PF08103.6  Uperin family


Domain annotation for each model (and alignments):
>> PF02089.10  Palmitoyl protein thioesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   6.9e-18   2.4e-14       5     258 ..      46     303 ..      43     327 .] 0.83

  Alignments for each domain:
  == domain 1    score: 52.8 bits;  conditional E-value: 6.9e-18
  PF02089.10   5 plplviwhgmgdsccnplsmgvikkmvekkipgiyvlsleigktlredvensfflnvnvqvttvcqilekdpk.lqqgynaigfsqggqflravaqrcpsppmvtlisvggqhqgvfglprcpgesshicdfirkslnagaysklvqerlvqaeywhdpikedvyrnysifladinqergvnesykknlmalkkfvmv.......kflndsivdpvdsewfgfyrsgqaketiplqestlytedrlglkkmdkagklvflak 258
                   p+++ hg+ d +    ++  +k+ +e   pg    +l++          s+ ++v+   + + ++++ dp  + +gy  +  sqg  + r+v +      + t+is+ g + gv+g        s    +    +   ay+   q+ +  a+ w dp ++d +     fl   n   g   ++k n++ l + v++           d  ++p +s  +g+  s +  + + ++   +y +d +gl+++d +g+lv+++ 
   MMETSP1325-20131115|766_1  46 YKPVIMLHGIDDNA---AAFDDMKQWIEGTHPGTPTYALDVFEGEP-ASWISLSVQVDGVSDAIRKVVASDPSsFADGYHLVCHSQGALICRCVIEAMDDHNVHTFISMAGPQGGVYGPDYFSFLPSVFQTLTADEIYRLAYESWAQKTISVANMWNDPKRQDEFLAGNTFLPMYNGLVGDATTFKANFLRLERGVFLvgdqsalATGTDGGIEPWQSGAWGYLNSHDYEDVVEMESMDFYQKDTFGLRTLDESGRLVIMTP 303
                 57899999999954...56778899999999999999998865432.23345556666666777889999*963789*****************************************999999999999999999********************************************************9977642222111233578899********************************************9863 PP

>> PF05057.9  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   4.2e-09   1.4e-05       8     134 ..      49     163 ..      44     176 .. 0.75

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 4.2e-09
  PF05057.9   8 vVlvHGlqgnsaDlelikeqlekikkelpeekieflmsennesktfkgidvlgerlaeevlevvkkkkdk.nkkiSfvghSlGgliaraaiaklkesemkeeaikglepvtfitlasPhLGvlyssks 134
                v++ HG++ n a +  +k+ +e +++ +p  ++ +    + e  ++  + v  + + + +++vv ++ ++      +v hS+G li r +i  + ++          +++tfi++a+P  Gv +   +
  MMETSP1325-20131115|766_1  49 VIMLHGIDDNAAAFDDMKQWIEGTHPGTPTYALDVF---EGEPASWISLSVQVDGVSDAIRKVVASDPSSfADGYHLVCHSQGALICRCVIEAMDDH----------NVHTFISMAGPQGGVYGPDYF 163
                99***************9999997777776655443...33444555566666666666666666666655333579***************88754..........79*********9999887766 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   1.6e-07   0.00055       1     139 [.      49     182 ..      47     280 .. 0.68

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.6e-07
                EEE------------H...HHHHHTTTSEEEEE-----------S...S--HHHHHHHHHHHHHH--........--EEEE--------HHHHHH-.---.EEEEEEE------STT---TTHHHHHHHHHH----....--H..HHHHH CS
  PF12697.2   1 vvllHGlggsaeswrp...laeaLaagyrvvapDlpGhGrSdrppdydpdtledlaadlaalldalgl.......rpvvlvGHSlGgavalaaaar.rpdlvrglvlidppgplpasalrpagpsllrrllagraaalrdlaarafarlf 139
                v++lHG   +a+ ++    ++e  + g +++a+D       ++       +l  +++ + ++++++ +       + ++lv+HS+G+++   + ++ + ++v+  + ++ p           gp++++ l    +  ++ l+a++++rl+
  MMETSP1325-20131115|766_1  49 VIMLHGIDDNAAAFDDmkqWIEGTHPGTPTYALDVFEGEPASWI------SLSVQVDGVSDAIRKVVAsdpssfaDGYHLVCHSQGALICRCVIEAmDDHNVHTFISMAGPQG------GVYGPDYFSFL----PSVFQTLTADEIYRLA 182
                799********888885556666668*********954333333......4444455444444444444444887789***************98857779*99996665552......22223222222....2223333333333332 PP

>> PF08103.6  Uperin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   8.7e-05       0.3       1      11 [.     100     110 ..     100     111 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 8.7e-05
  PF08103.6   1 GVGDliRKiVs 11 
                GV D+iRK+V+
  MMETSP1325-20131115|766_1 100 GVSDAIRKVVA 110
                9*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.39s 00:00:01.03 Elapsed: 00:00:00.70
# Mc/sec: 1119.44
//
Query:       MMETSP1325-20131115|768_1  [L=420]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-47  160.9   0.0      3e-47  160.5   0.0    1.1  1  PF00348.12 Polyprenyl synthetase


Domain annotation for each model (and alignments):
>> PF00348.12  Polyprenyl synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.5   0.0   2.2e-51     3e-47       2     255 ..      79     326 ..      78     330 .. 0.94

  Alignments for each domain:
  == domain 1    score: 160.5 bits;  conditional E-value: 2.2e-51
                 HHHHHHHHT-----HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHCCCTT-SB----B.HHHH---HHHCHHHHHHHHHHHHHHHHCHCCTCCCCHHHHHHHHHHHHHHHH--.-HHHHHCS--G--HHHHHHHHHHHTHHHCHHHHHHHHCC-----CCHHHHHHHHHH---HHHHHHHHHHH---TTT----.--TTTTT---HHHHHHHHH...HHHHHHHHHHHHHHH-HHHHCCCCHHHHHHCCHH CS
  PF00348.12   2 leamleyllagGKriRpllvvlaaralgvesekllalaaaiElihtasLvhDDlmDnsdlRRGkptvhkkfgeavailagdalllkafellaklkevrpeaklikiselanasgaqgevg.qlkdlesedkklsleeylrivksKTaaLfeasvqlaaivagadeeeekelkdfglelGlaFQivDDilDltadeeelgKpvgsDlqegkltlpvllalek...aseeqrkllkeasekklseaaakkvaetkeleal 255
                 le  ++ +  +GK++R+ l+ ++  +++  +ek++++  +i  +h asL+ DD+ Dns+lRRG p++h+ +g + +i+ ++++++ a+e +  l+  +p+a  + + el+n ++ qg+   + ++++++    ++e+y+r+v  KT+ Lf+++v l+a+ ++++     + + ++++l l+FQi DD+ +l ++ +  +K  ++Dl+egk+++p+++++ +    ++ +++l+k +++   +++a++ +a+  ++e +
   MMETSP1325-20131115|768_1  79 LEPFRYINQVPGKDVRGKLIDAFQVWMQIPQEKIEVIKQIIGELHNASLLIDDIEDNSQLRRGIPVAHSIYGVPNTINCANYVYFLALERVHMLG--NPKAMGVFVYELLNLHRGQGQDIlWRDTVQCP----TEEQYRRMVLDKTGGLFRLAVGLMAAFSECS----TDFTPLVNQLALYFQIRDDLINLASSDYMSSKSYCEDLTEGKFSFPIIHCILSrpeDTQLLNILKKRTDNIDIKRHAVMFMAKCGSFEHT 326
                 678899*****************************************************************************************..8********************999********....*******************************....6699**********************************************9887766777777777777777788888888888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.43s 00:00:01.17 Elapsed: 00:00:00.75
# Mc/sec: 1341.96
//
Query:       MMETSP1325-20131115|769_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.74
# Mc/sec: 498.70
//
Query:       MMETSP1325-20131115|770_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.60
# Mc/sec: 567.14
//
Query:       MMETSP1325-20131115|772_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.25   10.2   0.1       0.25   10.2   0.0    1.6  2  PF05627.6 Cleavage site for pathogenic type III effector avirulence factor Avr


Domain annotation for each model (and alignments):
>> PF05627.6  Cleavage site for pathogenic type III effector avirulence factor Avr
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.4      0.44     6e+03      12      15 ..      36      39 ..      36      40 .. 0.84
   2 ?   10.2   0.0   1.9e-05      0.25       8      17 ..      47      56 ..      42      60 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 0.44
  PF05627.6 12 GeWD 15
               G WD
  MMETSP1325-20131115|772_1 36 GMWD 39
               88*9 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 1.9e-05
  PF05627.6  8 vPKFGeWDen 17
               v KFGeW en
  MMETSP1325-20131115|772_1 47 VAKFGEWKEN 56
               67*****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 246.90
//
Query:       MMETSP1325-20131115|773_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.67
# Mc/sec: 307.59
//
Query:       MMETSP1325-20131115|774_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-07   31.4   0.0    3.1e-07   30.6   0.0    1.5  1  PF00581.15 Rhodanese-like domain


Domain annotation for each model (and alignments):
>> PF00581.15  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   2.3e-11   3.1e-07       9     111 ..      28     125 ..      20     127 .. 0.77

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 2.3e-11
  PF00581.15   9 l....ekekvvllDvRspeeyekghIpgAvnvpldslypkrdlpfkdklaeeleesgkkldkkktvvvycssgnrsggaaalllalilkel...gyknvyvLdGGfeawk 111
                 l       + +++D+R++++  +ghI g+++ +            ++  a  +   +   ++ ++vv++c  ++r+g  +a +l+  l e    g  +++vL GG ++w 
   MMETSP1325-20131115|774_1  28 LrdpvTRAQTLVVDTRDDDR-GGGHIAGSLHAAD-----------GSFDAAAVHATAAAPPRATRVVFHCMESARRGPRCAYRLKEYLIEQrivGEYQISVLQGGADQWV 125
                 44444568999*****9999.7************...........777888899999999**********877777777766655555443234555************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1356.24
//
Query:       MMETSP1325-20131115|776_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.4e-05   22.0   2.9    0.00021   20.8   2.0    1.5  1  PF12810.2 Glycine rich protein


Domain annotation for each model (and alignments):
>> PF12810.2  Glycine rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   2.0   1.5e-08   0.00021      11     116 ..       9     115 ..       5     116 .] 0.79

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 1.5e-08
  PF12810.2  11 pGlYkfelwGAsGgse.......lsess..kgGkGgYvsgeiklkkkttlylyiGgqgedtvkenmskggfngggsgsndksskessgsGGGatdirll.......denslksriiVAGGGG 116
                +G  ++ + GAsGg+            +   gG  +   g++ +  + +  + +Ggqg +++    ++ ++           +    g+GGGat+i          d+  ++  i+VAGGGG
  MMETSP1325-20131115|776_1   9 TGFHLIWMTGASGGNVpsmmpsrKG--QmmPGGDAAELCGVVFMYMNDKYKVLVGGQGGWKS--C-APTQY----------DDMVAVGGGGGATSIAQMmefdagdDTGPMQVPIMVAGGGG 115
                578889999******7667663322..24489999999********************9983..2.22222..........22346899*******988899999888999**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.67
# Mc/sec: 414.89
//
Query:       MMETSP1325-20131115|777_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.65
# Mc/sec: 280.19
//
Query:       MMETSP1325-20131115|778_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0068   15.7   0.2     0.0077   15.5   0.1    1.0  1  PF07698.6 7TM receptor with intracellular HD hydrolase
  ------ inclusion threshold ------
        0.4    9.2   1.9       0.43    9.1   1.3    1.2  1  PF03739.9 Predicted permease YjgP/YjgQ family


Domain annotation for each model (and alignments):
>> PF07698.6  7TM receptor with intracellular HD hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   1.1e-06    0.0077      81     138 ..      17      72 ..      16      76 .] 0.90

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.1e-06
  PF07698.6  81 dsrlalvvvvllsllisllfgnnleflllalvsglvgalslrrlrsRsqllragllva 138
                d r+a+++++ ++l + l f +++  ++++++++ + +l  rrl+sR  +++++l+va
  MMETSP1325-20131115|778_1  17 DKRCAILTGLAIALGFALGFALDFACAIAYIIGCPLFILPPRRLQSR--VIQSSLGVA 72 
                789*******************************************9..566666655 PP

>> PF03739.9  Predicted permease YjgP/YjgQ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.3   6.3e-05      0.43     276     303 ..      36      63 ..      22      73 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 6.3e-05
  PF03739.9 276 lalplsclilvligaplglvkprggrgl 303
                +al ++c i+ +ig+pl + +pr+ ++ 
  MMETSP1325-20131115|778_1  36 FALDFACAIAYIIGCPLFILPPRRLQSR 63 
                7999*******************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 325.22
//
Query:       MMETSP1325-20131115|779_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-26   91.5   0.1    4.3e-26   91.5   0.1    1.8  2  PF00889.14 Elongation factor TS
  ------ inclusion threshold ------
      0.016   15.1   0.1       0.99    9.3   0.0    2.2  2  PF06238.6  Borrelia burgdorferi BBR25 lipoprotein
        1.3    9.2   4.8       0.51   10.6   1.6    1.6  2  PF12200.3  Domain of unknown function (DUF3597)


Domain annotation for each model (and alignments):
>> PF00889.14  Elongation factor TS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.5   0.1   9.3e-30   4.3e-26     119     221 .]       6     113 ..       1     113 [. 0.94
   2 ?   -0.7   0.2      0.14   6.5e+02      53      56 ..     144     147 ..     113     183 .. 0.47

  Alignments for each domain:
  == domain 1    score: 91.5 bits;  conditional E-value: 9.3e-30
  PF00889.14 119 kelakdvAmhiaAmnp.qylseedvdaevlekekeiaeekakeegkpeeiiekiveGrlekflkevcLleQefvkddkktVeqvlkeasae....ikvvkfvrfevGe 221
                 +ela+ vAm+ aA+   ++++++++d+ev e+e++  +++ + +gkp++i ek+veGrl k+lk  +Ll+Q+++ d+++tV +++k   a+    i+v++f rf++Ge
   MMETSP1325-20131115|779_1   6 AELARAVAMQLAASPTvEFVRADEIDDEVKERERQAEMNAEDLAGKPDNIKEKMVEGRLGKILKTKVLLDQPYIRDPSMTVDELIKGYIATigenIQVARFSRFNLGE 113
                 79***********655799****************999999999******************************************999999999************8 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.14
  PF00889.14  53 eell 56 
                 ee++
   MMETSP1325-20131115|779_1 144 EEVK 147
                 1111 PP

>> PF06238.6  Borrelia burgdorferi BBR25 lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00022      0.99      16      50 ..      64      98 ..      58     138 .. 0.80
   2 ?    3.6   0.0     0.013        60      53      79 ..     161     187 ..     156     191 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00022
  PF06238.6 16 ltniaktdtnidhnyintfskvidffyktyistlk 50
               l +i kt   +d+ yi   s  +d + k yi+t+ 
  MMETSP1325-20131115|779_1 64 LGKILKTKVLLDQPYIRDPSMTVDELIKGYIATIG 98
               77899***************************985 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.013
  PF06238.6  53 etaestkifeeikdilkynieiieais 79 
                e+ +  k++  +kd+  yn ++i+ i 
  MMETSP1325-20131115|779_1 161 EAEDEVKVWAMVKDLEDYNAQLIDFIK 187
                3445689***************99885 PP

>> PF12200.3  Domain of unknown function (DUF3597)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.7   7.7e+03      54      56 ..      30      32 ..       8      50 .. 0.50
   2 ?   10.6   1.6   0.00011      0.51      17      71 ..     133     188 ..     115     189 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.7
  PF12200.3 54 vld 56
               + d
  MMETSP1325-20131115|779_1 30 IDD 32
               222 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00011
  PF12200.3  17 aapaaaaapaasaaaaaaat.aapaaapaaaaevdvaavldklaakkgeklnwrtS 71 
                a+++++++paa++ +++aa+ aapa +++a++ev+v a++++l++ +++ +++ +S
  MMETSP1325-20131115|779_1 133 AQTKGTEEPAAEEVKEEAAEeAAPAVVEEAEDEVKVWAMVKDLEDYNAQLIDFIKS 188
                34445555555555544444589999999****************99999888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       948  (0.0693388); expected 273.4 (0.02)
Passed bias filter:                      571  (0.0417642); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.44s 00:00:01.00 Elapsed: 00:00:00.55
# Mc/sec: 858.33
//
Query:       MMETSP1325-20131115|782_1  [L=408]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-08   33.0   0.0    6.6e-08   32.1   0.0    1.4  1  PF00271.26 Helicase conserved C-terminal domain
    1.1e-05   24.8   0.0    1.7e-05   24.2   0.0    1.3  1  PF00270.24 DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.042   13.9   0.0       0.07   13.2   0.0    1.3  1  PF00004.24 ATPase family associated with various cellular activities (AAA)


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   1.5e-11   6.6e-08      35      76 ..     324     365 ..     296     367 .. 0.85

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 1.5e-11
                 SEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------ CS
  PF00271.26  35 kvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgR 76 
                   +v+ +++ rG+ l++++ V++++ p ++++y++ +GRtgR
   MMETSP1325-20131115|782_1 324 LLIVTDQAMTRGLHLDNIRAVFILGGPANPDTYLHLAGRTGR 365
                 456677899********************************* PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   3.7e-09   1.7e-05      72     168 ..       5     118 ..       1     123 [. 0.70

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 3.7e-09
                 TTTSS.EEEEETTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHHCCHHT....TTEEEEEECTHHHHHCT.TTHH................HHHHHHHHSHHTTTSEEEEEESS-T.H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxx.xxxx................xxxxxxxxxxxxxxxxxxxxxxxxx.x RF
  PF00270.24  72 kkypklrvlliiggvalardqlsvldngvdivvgTpgrlddlvstgklnl....sqvrllVlDEadrllsq.gfsd................qlnqilqilcdgkrlqvivlSATlp.k 168
                 +  ++l+v+l++ g +     +  l   + ++ +Tp  l   ++t+k+ +     +v++lVlDE d ll   +f                   +++i ++ c   +lqv++ SATl+  
   MMETSP1325-20131115|782_1   5 LRGTNLNVALLTAGETPT---ADALAS-ASVIAATPVELAMAFNTTKSLFdwlpASVGVLVLDELDVLLPAkKFTGkkffrfqddgmhpaeaLVKTIARR-CSRPDLQVVAASATLDkA 118
                 556789999999888855...334544.89**************955533445455*************9533333555556668866666445556666.55557**********944 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.5e-05      0.07      39     125 ..      32     130 ..      15     136 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.5e-05
                 -HHHHHHHHHHHHHHHHTS.....-SEEEEEETGGGC-HHH......SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHH.H.TTSC CS
  PF00004.24  39 vgesekkirelfkeakeka.....kpsilfiDEidalaksr......sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpall.r.gRfd 125
                 + +++ ++++ f++ k+       +  +l++DE+d l +++        + +++++  +++L++ + +  ++  ++ v++a+ + dk ++  l r  R+ 
   MMETSP1325-20131115|782_1  32 IAATPVELAMAFNTTKSLFdwlpaSVGVLVLDELDVLLPAKkftgkkFFRFQDDGMHPAEALVKTIARRCSR-PDLQVVAASATLDKATSRKLeRlLRAS 130
                 556666677777776555577774559**************99765533468999**************997.66*******999988776662444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.37s 00:00:01.08 Elapsed: 00:00:00.75
# Mc/sec: 1303.62
//
Query:       MMETSP1325-20131115|786_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 280.25
//
Query:       MMETSP1325-20131115|780_1  [L=386]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-05   23.9   3.5     0.0061   15.9   0.0    3.5  4  PF07883.6 Cupin domain


Domain annotation for each model (and alignments):
>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       0.1   1.4e+03      16      30 ..      51      64 ..      42      71 .. 0.72
   2 !    6.4   0.0   0.00039       5.3      18      52 ..     135     169 ..     120     188 .. 0.75
   3 ?   -2.2   0.2      0.19   2.7e+03       6      17 ..     310     322 ..     306     325 .. 0.64
   4 !   15.9   0.0   4.5e-07    0.0061      40      64 ..     360     384 ..     351     385 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.1
               -TT-EEEEEEEE--E CS
  PF07883.6 16 HpgedeffyVleGeg 30
                ++  e+ +V eG++
  MMETSP1325-20131115|780_1 51 NEDY-ETAVVEEGRI 64
               3344.9999999984 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.00039
                T-EEEEEEEE--EEEEE-.TEEEEE-TT-EEEE-TT CS
  PF07883.6  18 gedeffyVleGegeltvd.geeveleaGdsvyfpag 52 
                 + + fyV+ G+g  + d   e++   Gd+v+ p+ 
  MMETSP1325-20131115|780_1 135 TS-QAFYVITGKGSSHSDvHGEIPWAMGDMVVLPRC 169
                45.99**********977444799999***999984 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 0.19
                ----.EE-EBE-T CS
  PF07883.6   6 ppGe.sapshrHp 17 
                 p +   ++hrH 
  MMETSP1325-20131115|780_1 310 LPAHdHQQPHRHN 322
                4444467788885 PP

  == domain 4    score: 15.9 bits;  conditional E-value: 4.5e-07
                EE-TT-EEEE-TT-EBEEB--SSS- CS
  PF07883.6  40 eleaGdsvyfpagtpHrfrNtgdep 64 
                + ++G ++++p+g +H ++N++de 
  MMETSP1325-20131115|780_1 360 DWSTGSVFLTPPGWWHSHHNESDEK 384
                5689*******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.33s 00:00:00.97 Elapsed: 00:00:00.99
# Mc/sec: 934.34
//
Query:       MMETSP1325-20131115|787_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   12.1   0.0       0.44   10.5   0.0    1.7  2  PF00498.21 FHA domain


Domain annotation for each model (and alignments):
>> PF00498.21  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   3.2e-05      0.44       1      28 [.       6      37 ..       6      57 .. 0.86
   2 ?   -1.0   0.0      0.12   1.7e+03      22      37 ..      79      93 ..      77      98 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 3.2e-05
                EEE-E-TTSSS---....TTTS-TTCEEEEEE CS
  PF00498.21  1 vtiGRssdcdivld....dpsiSrkHalikyd 28
                +t+G +++++iv+      +s+S  H+++k+d
   MMETSP1325-20131115|787_1  6 ITFGTDPSSSIVFAgpgpWASLSPTHCTVKVD 37
                689**********988878*********9876 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.12
                CEEEEEEETCEEEEEE CS
  PF00498.21 22 HalikydeggkfyleD 37
                Ha+++y+++ ++ +  
   MMETSP1325-20131115|787_1 79 HATVTYHGP-TCKIAP 93
                999999998.666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.74
# Mc/sec: 323.83
//
Query:       MMETSP1325-20131115|788_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.68
# Mc/sec: 468.70
//
Query:       MMETSP1325-20131115|789_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-15   56.6   3.2    1.5e-15   56.5   2.2    1.1  1  PF08583.5 Cytochrome c oxidase biogenesis protein Cmc1 like
  ------ inclusion threshold ------
       0.02   15.0   0.9      0.029   14.5   0.6    1.4  1  PF08742.6 C8 domain
      0.091   12.5   5.4       0.11   12.2   0.9    2.1  2  PF05254.7 Uncharacterised protein family (UPF0203)
       0.13   12.1   1.4        5.6    6.9   0.1    2.2  2  PF10203.4 Cytochrome c oxidase assembly protein PET191
       0.25   11.2   5.3        1.7    8.6   0.6    2.1  2  PF05051.8 Cytochrome C oxidase copper chaperone (COX17)
       0.27   11.0   4.6       0.52   10.1   3.2    1.5  1  PF06747.8 CHCH domain


Domain annotation for each model (and alignments):
>> PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.5   2.2   6.8e-19   1.5e-15       8      61 ..       7      61 ..       1      74 [. 0.91

  Alignments for each domain:
  == domain 1    score: 56.5 bits;  conditional E-value: 6.8e-19
  PF08583.5  8 karkeCaelikafaeChkd.rtlkavgkCneekeamkkClkeyrtderlkdrekd 61
               ka+ +C++l++++++Ch + ++ k++g+Cne k+am+kC k+++ d+r+++ e  
  MMETSP1325-20131115|789_1  7 KAHPQCEKLVDELVKCHEEyQYGKFFGACNEIKQAMDKCFKAEKVDKRTRNLEAG 61
               689**********************************************887765 PP

>> PF08742.6  C8 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.6   1.3e-05     0.029       3      34 ..       7      37 ..       5      56 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.3e-05
  PF08742.6  3 kaeelCevllspkfaeChsvvdpepfyeaCve 34
               ka+ +Ce+l+++ + +Ch++ ++ +f+ aC e
  MMETSP1325-20131115|789_1  7 KAHPQCEKLVDE-LVKCHEEYQYGKFFGACNE 37
               7899******97.*****************76 PP

>> PF05254.7  Uncharacterised protein family (UPF0203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.2     0.028        64       6      28 ..       9      31 ..       6      34 .. 0.83
   2 ?   12.2   0.9   4.9e-05      0.11       5      21 ..      31      47 ..      28      68 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.028
  PF05254.7  6 aeeCtelkekYdkCFnkwysekF 28
                ++C++l  +  kC  ++   kF
  MMETSP1325-20131115|789_1  9 HPQCEKLVDELVKCHEEYQYGKF 31
               68999999999999999877777 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 4.9e-05
  PF05254.7  5 vaeeCtelkekYdkCFn 21
               ++ +C+e+k++ dkCF+
  MMETSP1325-20131115|789_1 31 FFGACNEIKQAMDKCFK 47
               5679************7 PP

>> PF10203.4  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.014        32       3      18 ..      10      25 ..       8      27 .. 0.83
   2 ?    6.9   0.1    0.0025       5.6       4      18 ..      34      48 ..      32      60 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.014
  PF10203.4  3 ksCkklkedlaeClle 18
                 C+kl ++l++C +e
  MMETSP1325-20131115|789_1 10 PQCEKLVDELVKCHEE 25
               57***********765 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0025
  PF10203.4  4 sCkklkedlaeClle 18
               +C+++k+++ +C + 
  MMETSP1325-20131115|789_1 34 ACNEIKQAMDKCFKA 48
               8***********976 PP

>> PF05051.8  Cytochrome C oxidase copper chaperone (COX17)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2    0.0085        19      24      45 ..       5      26 ..       4      29 .. 0.82
   2 ?    8.6   0.6   0.00073       1.7      11      30 ..      34      53 ..      27      63 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0085
               HH----SCHHHHHHHHHHH--- CS
  PF05051.8 24 lekgeeeCkklieaykaClrge 45
               l+k + +C+kl+++  +C  ++
  MMETSP1325-20131115|789_1  5 LFKAHPQCEKLVDELVKCHEEY 26
               5677889**********97665 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00073
               TSHHHHHHHHHHHHH----S CS
  PF05051.8 11 aCpeekkaRDeCilekgeee 30
               aC e k+a D+C+  ++ ++
  MMETSP1325-20131115|789_1 34 ACNEIKQAMDKCFKAEKVDK 53
               9***********98887776 PP

>> PF06747.8  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.2   0.00023      0.52       1      35 []      12      48 ..      12      48 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00023
               ---HHHHHHHHHHHH-S.S.--TTHHHHHHHHHHHCC CS
  PF06747.8  1 CgeEfkellsClkensd.e.fskCrkefeafreCvkk 35
               C +  +el +C +e+ +   f++C +  +a+++C+k+
  MMETSP1325-20131115|789_1 12 CEKLVDELVKCHEEYQYgKfFGACNEIKQAMDKCFKA 48
               7788899**********659**************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       624  (0.0456407); expected 273.4 (0.02)
Passed bias filter:                      476  (0.0348157); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.70
# Mc/sec: 260.18
//
Query:       MMETSP1325-20131115|791_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.75
# Mc/sec: 536.78
//
Query:       MMETSP1325-20131115|792_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   15.3  29.6      0.022   14.6  20.5    1.4  1  PF10986.3  Protein of unknown function (DUF2796)
       0.02   13.8   8.4      0.024   13.5   5.8    1.2  1  PF02535.17 ZIP Zinc transporter
        1.5    8.0  18.4        2.1    7.5  12.7    1.2  1  PF04592.9  Selenoprotein P, N terminal region
        2.3    7.9   6.8        2.8    7.6   4.7    1.1  1  PF01034.15 Syndecan domain


Domain annotation for each model (and alignments):
>> PF10986.3  Protein of unknown function (DUF2796)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6  20.5   6.5e-06     0.022      66     117 ..     190     243 ..     152     246 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 6.5e-06
  PF10986.3  66 aakCkl..eeaevessleeeeeedehhdhddhdhdhehdhdehddhdeHsdfea 117
                a  C +  ++ +++ ++++++++++hh +d+hdh+++hdh++hddh++H df a
  MMETSP1325-20131115|792_1 190 ASACVIdlDRDDLHRDHHDHRDHHDHHRDDHHDHRDHHDHHHHDDHHHHDDFVA 243
                5566541155667777777788888899999999999***************87 PP

>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   5.8   6.9e-06     0.024     134     169 ..     181     239 ..      98     258 .. 0.60

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.9e-06
  PF02535.17 134 s.......................kvenaeseeeeteeeesdhdheskeksesdkesel 169
                 +                       +++ +++++ ++++ ++dh  ++++++++d++++ 
   MMETSP1325-20131115|792_1 181 EastherllasacvidldrddlhrDHHDHRDHHDHHRDDHHDHRDHHDHHHHDDHHHHD 239
                 13334456666677777777776533333333333333333333333333333333332 PP

>> PF04592.9  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  12.7   0.00061       2.1     153     215 ..     177     239 ..     160     255 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00061
  PF04592.9 153 nCsltsledldeckkvtleekdkpvekeprkdlekhhshrkldsekekhkhshehlgssslke 215
                 C  ++++++    ++ + + d+   + +++d+ +hh+h++ d + ++++h+h+h+ + ++++
  MMETSP1325-20131115|792_1 177 RCHEEASTHERLLASACVIDLDRDDLHRDHHDHRDHHDHHRDDHHDHRDHHDHHHHDDHHHHD 239
                678888888888888888888998888899999999999888888888888888887555543 PP

>> PF01034.15  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   4.7   0.00083       2.8     150     189 ..     205     242 ..     164     263 .. 0.58

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00083
  PF01034.15 150 edldtevetseddstptdedeeddeedpeddnkpetteke 189
                  ++d ++++++++++  d+ +++d+  +++d ++++ ++ 
   MMETSP1325-20131115|792_1 205 DHHDHRDHHDHHRDDHHDHRDHHDH--HHHDDHHHHDDFV 242
                 2334444444444433333333333..3344444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       661  (0.048347); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.41s 00:00:01.01 Elapsed: 00:00:00.59
# Mc/sec: 1080.39
//
Query:       MMETSP1325-20131115|793_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-42  145.6   0.4    1.2e-28  100.2   0.0    1.4  2  PF00504.16 Chlorophyll A-B binding protein
  ------ inclusion threshold ------
      0.077   12.1   1.6       0.41    9.7   0.0    2.2  2  PF06197.8  Protein of unknown function (DUF998)


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.2   0.0   1.8e-32   1.2e-28      14     155 ..       2     145 ..       1     146 [. 0.72
   2 !   50.4   0.0   3.8e-17   2.6e-13       7      60 ..      99     154 ..      94     168 .. 0.80

  Alignments for each domain:
  == domain 1    score: 100.2 bits;  conditional E-value: 1.8e-32
                 XXXXXXX.---.-TTTTT--------TTT--------------.----S--TT--.STT--...---........--S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT------- CS
  PF00504.16  14 gfDplglskdp.tlkrlreaEliHGRvAMlavlGalvpelltk.lsaaskfaelpawaeag...gls........lptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 gfDplgl+kd+ t+ ++r aE++H+R+AMla++G+ + e++ k l a    ++ p +a++g     s        +  + + + ++ ++++  a+   l        ++++ pG+ gfdplgl  kd++   ++++kE+ +GR AM+a+++f++q+
   MMETSP1325-20131115|793_1   2 GFDPLGLGKDKtTILNYRNAEIKHARLAMLAAAGWPLGEVFDKpL-ASALNLNSP-LADNGdlsP-SllngglglISPAYW-VGVVGMAAAVEALGFTL--------KNKELPGDYGFDPLGLYpKDAAGQLQMQEKEMIHGRVAMVAIVAFAAQE 145
                 8********999*****************************9952.222333334.565663330.133233332222333.33333333332233333........34678*******************************************8 PP

  == domain 2    score: 50.4 bits;  conditional E-value: 3.8e-17
                 XXXXXXXXXXXXXX..---.-TTTTT--------TTT------------------S CS
  PF00504.16   7 gslpgdlgfDplgls.kdp.tlkrlreaEliHGRvAMlavlGalvpelltklsaas 60 
                  +lpgd+gfDplgl  kd+ +  +++e E+iHGRvAM+a++++ ++e++ k+s+++
   MMETSP1325-20131115|793_1  99 KELPGDYGFDPLGLYpKDAaGQLQMQEKEMIHGRVAMVAIVAFAAQEFASKVSVVN 154
                 57999999999999965668888899999999999999999999999998876543 PP

>> PF06197.8  Protein of unknown function (DUF998)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2    0.0065        44     135     165 ..      77     112 ..      62     113 .. 0.81
   2 ?    9.7   0.0     6e-05      0.41      87     118 ..     111     143 ..     109     168 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.0065
  PF06197.8 135 lrllglvallllvallvlllaa.....ldgglglGl 165
                ++++g+v+++++v +l+++l +      +g ++lGl
  MMETSP1325-20131115|793_1  77 AYWVGVVGMAAAVEALGFTLKNkelpgDYGFDPLGL 112
                678999999999999999999988888788888887 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 6e-05
  PF06197.8  87 glfpedtgggsp.slsgviHglaslvaflalal 118
                gl+p+d++g+ +   + +iHg +++va +a+a+
  MMETSP1325-20131115|793_1 111 GLYPKDAAGQLQmQEKEMIHGRVAMVAIVAFAA 143
                99******9999*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 827.42
//
Query:       MMETSP1325-20131115|794_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-86  289.3   3.7    3.1e-86  289.2   2.5    1.0  1  PF00162.14 Phosphoglycerate kinase


Domain annotation for each model (and alignments):
>> PF00162.14  Phosphoglycerate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.2   2.5   2.3e-90   3.1e-86     168     384 .]       2     221 ..       1     221 [. 0.99

  Alignments for each domain:
  == domain 1    score: 289.2 bits;  conditional E-value: 2.3e-90
                 ----HHHHHHHHHHHHCT---SSEEEE---------HHHHHHHTTT-SEEE-----HHHHHHH-----------GGGHHHHHHHHH-------EEE--SEEEEESSSSTTS--EEEEGGG-----E-EE---HHHHHHHHHHTT-SEEEE------TTSGGG----HHHHHHHH--...--EEEE----HHHHHHH---CCCSSEE------HHHHH--- CS
  PF00162.14 168 aaGflmekElealekalenperpvvavlGGakvsdklkvienllkkvdklligGgmantFlkakglevgkslveeelvetakellekakekgvklvlPvDvvvakefkkdaeskvvesdeipedvmilDiGpktielfakvikeaktvvwnGplGvfefeaFakGTkavakalaes...galsivGGgdtaaaveklgladkfshiStGGgAsLelLegk 384
                 a Gflm+kEl++l+ a+e p +p++av+GGakvs+k+ vie+ll+k+d++ igGgm++tF+ka g +vg+s+vee+l+  a el+++a++kgvk+ lP Dv+va++f++dae+k v++d+ip+++m+lDiG++++++f++ ++++ktv+wnGp+Gvfef++FakGT+ va+ala++   ga+si+GGgd++aave++gl  k+shiStGGgAsLelLegk
   MMETSP1325-20131115|794_1   2 AGGFLMDKELKYLQGAVEVPVKPLAAVIGGAKVSTKVPVIESLLDKCDSIFIGGGMIFTFYKALGKDVGASMVEEDLIPMAAELMKSAEAKGVKFFLPSDVIVADKFAADAEAKNVSVDDIPDGWMGLDIGSESMSTFSSELSTCKTVIWNGPMGVFEFDKFAKGTFGVADALAAAtdaGAISIIGGGDSVAAVEQAGLGAKMSHISTGGGASLELLEGK 221
                 569***************************************************************************************************************************************************************************99999****************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.44s 00:00:00.90 Elapsed: 00:00:00.64
# Mc/sec: 913.61
//
Query:       MMETSP1325-20131115|790_1  [L=344]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-08   34.8   1.3    1.7e-08   34.2   0.9    1.3  1  PF07889.7  Protein of unknown function (DUF1664)
    0.00049   19.7   2.6    0.00049   19.7   1.8    2.1  2  PF07926.7  TPR/MLP1/MLP2-like protein
  ------ inclusion threshold ------
      0.014   13.0   3.0      0.019   12.5   2.1    1.1  1  PF01576.14 Myosin tail
      0.025   13.8   0.1      0.048   12.9   0.0    1.4  1  PF05791.6  Bacillus haemolytic enterotoxin (HBL)
       0.03   12.6   0.5      0.042   12.1   0.3    1.1  1  PF04906.8  Tweety
      0.032   14.1   5.5      0.024   14.5   2.3    1.8  2  PF05103.8  DivIVA protein
      0.042   12.8   4.5      0.021   13.8   1.6    1.6  2  PF00261.15 Tropomyosin
       0.15   11.8   2.1        1.1    9.0   1.4    2.1  1  PF06148.6  COG (conserved oligomeric Golgi) complex component, COG2
       0.17   11.2   4.0       0.16   11.3   1.1    1.9  2  PF01442.13 Apolipoprotein A1/A4/E domain
       0.28   10.7   1.4       0.47   10.0   1.0    1.4  1  PF03233.8  Aphid transmission protein
       0.37   10.2   8.2       0.95    8.9   5.7    1.7  1  PF00769.14 Ezrin/radixin/moesin family
       0.43   10.3   3.2        1.3    8.7   1.0    2.1  2  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.87    9.7   4.7       0.47   10.6   1.2    2.0  2  PF05531.7  Nucleopolyhedrovirus P10 protein
        1.3    8.7   5.5        1.5    8.5   0.6    2.6  3  PF06009.7  Laminin Domain II


Domain annotation for each model (and alignments):
>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.9   1.7e-11   1.7e-08      35     126 .]     122     213 ..     102     213 .. 0.95

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 1.7e-11
  PF07889.7  35 fvtkrnladAvasvtkqlekvseavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLesklesleskQ 126
                 v k+ +a+    v+++l +++++va+ + ++    + l ++ld+  e++++ k+ev++++++++++k+d +++  ++eg ++ l + + kQ
  MMETSP1325-20131115|790_1 122 LVSKKHVAQHLGVVGQKLASLQNNVAAVREKMQIAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKIAGAIEGCQQELIEASRKQ 213
                589999*****************************************************************************999988887 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.9   1.8e+03      49      69 ..      63      85 ..      59      88 .. 0.73
   2 !   19.7   1.8   5.1e-07   0.00049      49     118 ..     120     189 ..     118     193 .. 0.96

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.9
  PF07926.7 49 relikhaet..iqeLtklkkela 69
               r l++ha+t   q L kl+++ a
  MMETSP1325-20131115|790_1 63 RRLTQHADTtaDQILAKLSQQQA 85
               67888988843366888888876 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 5.1e-07
  PF07926.7  49 relikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevelselekkieeln 118
                ++l+ ++ ++q+L  + ++la+lq++++ +r++++ a + l +  ++  e +++L++e++++++ ie+++
  MMETSP1325-20131115|790_1 120 TQLVSKKHVAQHLGVVGQKLASLQNNVAAVREKMQIAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVK 189
                69999***************************************************************97 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.1     2e-05     0.019     541     621 ..     143     223 ..     138     245 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2e-05
  PF01576.14 541 kaealrlKKKleadineLeialdaankanaeaqknvkklqqqvkelqtqveeeqraredareqlavaerraaaleaEleel 621
                 ++++ +++ K++   n L   ld++  ++ +++ +v+++qq + +++ + e+   a e  +++l +a r+++  +  ++ l
   MMETSP1325-20131115|790_1 143 QNNVAAVREKMQIAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKIAGAIEGCQQELIEASRKQEFTARGVQLL 223
                 57789999**************************************************************98877766654 PP

>> PF05791.6  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.9e-05     0.048      57     145 ..     121     211 ..     117     248 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.9e-05
  PF05791.6  57 qklakanakeWldelkpqliktnqniieYdtkFqnyYdtLveavdk..kdketlkeglekLqeeiqknqkevkqlleeLkafknklakdtk 145
                q  +k+++ + l ++  +l ++++n+    +k q  Y+ L + +d+  + +++lk+++++ q++i   +++ ++    ++  +++l + ++
  MMETSP1325-20131115|790_1 121 QLVSKKHVAQHLGVVGQKLASLQNNVAAVREKMQIAYNGLRKRLDHsiEMQDDLKNEVQNAQQSIEDVKDDTEKIAGAIEGCQQELIEASR 211
                7789****************************************652267899**************999999999888888888877665 PP

>> PF04906.8  Tweety
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   4.3e-05     0.042      94     179 ..     128     214 ..     102     218 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.3e-05
  PF04906.8  94 ltyslrkanhtlagikklvseteesleekleqeLtkleeifakrtdlletlrllqeqveeivqqlseip.fwkeaelsltelaekve 179
                + + l  + + la++++ v  + e+++ + +   ++l++ ++ + dl + +++ q+ +e + + +++i+  +++ + +l e ++k e
  MMETSP1325-20131115|790_1 128 VAQHLGVVGQKLASLQNNVAAVREKMQIAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKIAgAIEGCQQELIEASRKQE 214
                56667778899*********************************************************9888888877777766665 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       3.4   3.4e+03      75      98 ..      61      84 ..      57      93 .. 0.66
   2 ?   14.5   2.3   2.5e-05     0.024      20      90 ..     125     199 ..     123     216 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 3.4
  PF05103.8 75 taeevkanakkeaeliikeaekka 98
               ++ ++ + a ++a++i+++ ++++
  MMETSP1325-20131115|790_1 61 VTRRLTQHADTTADQILAKLSQQQ 84
               555666677777777766655554 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 2.5e-05
  PF05103.8  20 eeeVdeFLdqvikdyeallkeneelkeeiee....leekleeykeleeslkkslvvaqetaeevkanakkeaeli 90 
                ++ V + L  v +++ +l++++++ +e+++     l+++l++  e++++lk+ +  aq+  e+vk  ++k a  i
  MMETSP1325-20131115|790_1 125 KKHVAQHLGVVGQKLASLQNNVAAVREKMQIayngLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKIAGAI 199
                68899999**************9999998753333899****************************999987666 PP

>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.6   2.5e+03     195     217 ..      58      80 ..      48      85 .. 0.73
   2 ?   13.8   1.6   2.1e-05     0.021      10      82 ..     150     222 ..     137     225 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.6
  PF00261.15 195 AErsvqkLekevdrledeleaek 217
                  Er   +L ++ d+  d++ a+ 
   MMETSP1325-20131115|790_1  58 GERVTRRLTQHADTTADQILAKL 80 
                 57888888888888888877654 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 2.1e-05
  PF00261.15  10 ldkaeerleeakekleeaekraekaeaEvaslnrriqllEeelerseerleealekLeeaekaadeserarkv 82 
                  +k++   + + ++l+++ +  ++ ++Ev+  ++ i+ + ++ e+    +e  +++L ea+++++   r+++ 
   MMETSP1325-20131115|790_1 150 REKMQIAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKIAGAIEGCQQELIEASRKQEFTARGVQL 222
                 34555555677899999999*******************************************9998888776 PP

>> PF06148.6  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.4    0.0011       1.1      60     116 ..     135     216 ..     120     228 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0011
  PF06148.6  60 lSgsLvglqeeleel.........................esplaaarkkvesvrsklseveeeveskikekkdleeekell 116
                ++++L +lq++++ +                         + ++++a++ +e+v++  ++   ++e++ +e  ++ +++e+ 
  MMETSP1325-20131115|790_1 135 VGQKLASLQNNVAAVrekmqiaynglrkrldhsiemqddlKNEVQNAQQSIEDVKDDTEKIAGAIEGCQQELIEASRKQEFT 216
                6778888888888885555555555555555555555555777777777777777777777777777777777777777665 PP

>> PF01442.13  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.66   6.4e+02      53     175 ..      64      80 ..      55      90 .. 0.40
   2 ?   11.3   1.1   0.00016      0.16      64     112 ..     141     188 ..     123     218 .. 0.60

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.66
                 H---HHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHH----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01442.13  53 rlepyrdevkqqlgqnleelrqrlkpyaeelreqlnrdveelreqLapvaeelrsrlrqnvealkerLaPyaeelrqklaerleelkesltpqaeelkaqlseqveelreklapyaedlqekl 175
                 rl++++d    q+ ++                                                                                                          l
   MMETSP1325-20131115|790_1  64 RLTQHADTTADQILAK----------------------------------------------------------------------------------------------------------L 80 
                 2222222222222222..........................................................................................................2 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00016
                 T-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------- CS
  PF01442.13  64 qlgqnleelrqrlkpyaeelreqlnrdveelreqLapvaeelrsrlrqn 112
                  l+ n+  +r++++ + + lr++l+ ++ e++  L+  ++ +++++++ 
   MMETSP1325-20131115|790_1 141 SLQNNVAAVREKMQIAYNGLRKRLDHSI-EMQDDLKNEVQNAQQSIEDV 188
                 3455666666666666666666666666.56666666666666665432 PP

>> PF03233.8  Aphid transmission protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.0   0.00048      0.47     103     163 .]     136     197 ..     119     197 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00048
  PF03233.8 103 kekktklletLkeaqnrik.kleeetkklaekivtekllkeevkdlderlseirdslkaiiG 163
                 +k + l + +  ++++++   +   k+l++ i+ +  lk+ev++ +++++ ++d+  +i G
  MMETSP1325-20131115|790_1 136 GQKLASLQNNVAAVREKMQiAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKIAG 197
                5555555555555555544133456899****************************999977 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   5.7   0.00097      0.95      48     127 ..     142     221 ..     118     334 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00097
  PF00769.14  48 eaqklekkakeleeekerLeeeaaksekekeeLekevdeaeaevakleeerekkeaeteqlqkelreareaeeeakeell 127
                  +++ ++ +++++ + + L+++  +s + +++L++ev++a+  ++  ++  ek +   e  q+el+ea +++e ++   +
   MMETSP1325-20131115|790_1 142 LQNNVAAVREKMQIAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKIAGAIEGCQQELIEASRKQEFTARGVQ 221
                 55667777899999999*****************************************************9987766543 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       0.4   3.9e+02      49      83 ..      62      96 ..      58     102 .. 0.79
   2 ?    8.7   1.0    0.0014       1.3      23      80 ..     134     191 ..     122     200 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.4
  PF06103.6 49 teellaktnelleDvneKvetldpvfqavadlges 83
               t +l+++++++++++  K ++ +  ++ v++ +++
  MMETSP1325-20131115|790_1 62 TRRLTQHADTTADQILAKLSQQQAPVTIVNGGSRN 96
               67899999999999999999988888877776665 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0014
  PF06103.6  23 klkktldevnktvkkltkqvdgitketeellaktnelleDvneKvetldpvfqavadl 80 
                 + + l+++++ v+ ++++++   + + + l+++ e+++D+++ v++ ++ ++ v+d 
  MMETSP1325-20131115|790_1 134 VVGQKLASLQNNVAAVREKMQIAYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDD 191
                5677899999************************************999999999985 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.8   5.7e+03      38      52 ..      74      88 ..      63      92 .. 0.65
   2 ?   10.6   1.2   0.00048      0.47      15      63 ..     134     183 ..     127     195 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 5.8
  PF05531.7 38 telnekLdaqsaqLa 52
               +++ +kL +q+a ++
  MMETSP1325-20131115|790_1 74 DQILAKLSQQQAPVT 88
               467777777776665 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00048
  PF05531.7  15 avddkVdalqqqvddvqenlp.dvtelnekLdaqsaqLaeletkvenIqd 63 
                 v +k+ +lq++v+ v+e+++   + l ++Ld   +  ++l+++v+n q+
  MMETSP1325-20131115|790_1 134 VVGQKLASLQNNVAAVREKMQiAYNGLRKRLDHSIEMQDDLKNEVQNAQQ 183
                6889***************9944578*******99999999999998775 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.2   1.2e+03      51      76 ..      56      81 ..      37      86 .. 0.67
   2 ?    3.9   2.2     0.041        40      15      71 ..     135     195 ..     120     196 .. 0.72
   3 ?    8.5   0.6    0.0015       1.5       2      39 ..     175     212 ..     162     231 .. 0.63

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 1.2
               XXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF06009.7 51 nkavrdarrsvrkleklapqlldkLk 76
               +++ r  rr  +   ++a+q+l+kL+
  MMETSP1325-20131115|790_1 56 SSGERVTRRLTQHADTTADQILAKLS 81
               55555566666666777788887775 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.041
                XXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF06009.7  15 Vlkelegistnventkak....lsklngsveetnekvksankavrdarrsvrkleklapql 71 
                V ++l+ +++nv ++++k    +++l++ +++  e   +  + v++a++s+ +++   +++
  MMETSP1325-20131115|790_1 135 VGQKLASLQNNVAAVREKmqiaYNGLRKRLDHSIEMQDDLKNEVQNAQQSIEDVKDDTEKI 195
                7788888999998888873333467777777777777788888888888888877766655 PP

  == domain 3    score: 8.5 bits;  conditional E-value: 0.0015
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF06009.7   2 kelakeAnetakeVlkelegistnventkaklsklngs 39 
                k+ +++A+++ + V++++e i+  +e  +++l +  ++
  MMETSP1325-20131115|790_1 175 KNEVQNAQQSIEDVKDDTEKIAGAIEGCQQELIEASRK 212
                55555555555555555555555555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       887  (0.0648771); expected 273.4 (0.02)
Passed bias filter:                      625  (0.0457139); expected 273.4 (0.02)
Passed Vit filter:                        98  (0.00716793); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.76u 0.47s 00:00:01.23 Elapsed: 00:00:00.70
# Mc/sec: 1177.64
//
Query:       MMETSP1325-20131115|797_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-09   37.6   0.2    1.4e-09   37.3   0.1    1.1  1  PF03124.9 EXS family
  ------ inclusion threshold ------
       0.01   15.2   0.1      0.031   13.7   0.0    1.8  2  PF07582.7 AP endonuclease family 2 C terminus


Domain annotation for each model (and alignments):
>> PF03124.9  EXS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.1     2e-13   1.4e-09     287     346 .]       2      61 ..       1      61 [. 0.85

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 2e-13
  PF03124.9 287 iYylaividlilRftWilklsnerlstiseselgvfllallEvlRRwiWvffRvEnEhvk 346
                +Yy +i++++ lRf   +  +  +  t  e  ++ +l++llEv+RR++W ++R+E+E v+
  MMETSP1325-20131115|797_1   2 VYYAIILFNFALRFGPPMVGLRYTGPTGIEGLSFALLFQLLEVVRRCVWAVLRIEWECVN 61 
                8*************98887666333334478899999********************986 PP

>> PF07582.7  AP endonuclease family 2 C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.19   1.3e+03      13      21 ..      23      31 ..      21      31 .. 0.87
   2 ?   13.7   0.0   4.5e-06     0.031      17      42 ..      52      77 ..      35      81 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.19
  PF07582.7 13 gYdgplsiE 21
                Y+gp+ iE
  MMETSP1325-20131115|797_1 23 RYTGPTGIE 31
               59***9998 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 4.5e-06
  PF07582.7 17 plsiEWEDalmdreeGareavafikk 42
               +l iEWE+   + ++G  ++ + +++
  MMETSP1325-20131115|797_1 52 VLRIEWECVNSHGKHGGMKSPEKLER 77
               4569************9998777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 385.30
//
Query:       MMETSP1325-20131115|798_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.067   13.2   0.0      0.074   13.0   0.0    1.1  1  PF05641.7  Agenet domain
      0.081   12.6   0.2      0.093   12.4   0.1    1.1  1  PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
       0.13   11.9   0.0       0.14   11.8   0.0    1.0  1  PF00567.19 Tudor domain


Domain annotation for each model (and alignments):
>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.6e-05     0.074       1      53 [.      16      65 ..      16      69 .] 0.89

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.6e-05
  PF05641.7  1 fskGseVEVsseeeglrgaWfrAkVlkelkeskykveyddlsledgeskllke 53
               +++G++VE + +    rg ++++ ++  +++ ++ + yd  ++e g +k+l +
  MMETSP1325-20131115|798_1 16 WREGDKVECRYKG---RGEYYPGRIRRQNRDGTFDIDYDYGDKEMGVDKQLIK 65
               589*******987...99********************999999988887655 PP

>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1     2e-05     0.093       6      49 ..      19      60 ..      14      68 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2e-05
               ----EEE-ST---BB---EEEE-----EEEE-----EEEE---- CS
  PF09038.5  6 glrvvakwssngyfysgkitkdagegkykllfddgyecdvlgkd 49
               g +v +++   g +y g+i ++  +g + + +d g +   +g d
  MMETSP1325-20131115|798_1 19 GDKVECRYKGRGEYYPGRIRRQNRDGTFDIDYDYGDKE--MGVD 60
               5578889999********************99988543..3444 PP

>> PF00567.19  Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.1e-05      0.14      50     103 ..      13      66 ..       2      68 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.1e-05
                 --------EEEEE-TTT--EEEEEEEEEE---EEEEEETT---EEE.EECCGEEE CS
  PF00567.19  50 slapkvgdgcvalfsedgkwyRAkitvslddekveVlfiDyGntet.vpvsdlre 103
                   + + gd + ++++  g++y ++i+ +++d+ +++ + DyG  e  v+++ +++
   MMETSP1325-20131115|798_1  13 NSTWREGDKVECRYKGRGEYYPGRIRRQNRDGTFDIDY-DYGDKEMgVDKQLIKP 66 
                 45667899999*************************99.******9999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.61
# Mc/sec: 271.06
//
Query:       MMETSP1325-20131115|799_1  [L=534]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.2    8.0  16.3       0.41    9.6   1.8    3.1  3  PF04582.7  Reovirus sigma C capsid protein
        1.4    8.0  53.2        1.7    7.6  16.9    2.8  3  PF13851.1  Growth-arrest specific micro-tubule binding
        1.6    7.1  41.5       0.12   10.8   6.8    3.3  3  PF08317.6  Spc7 kinetochore protein
          2    6.7  61.7      0.092   11.1  17.0    2.7  2  PF05701.6  Plant protein of unknown function (DUF827)
        3.8    7.2   7.2        1.9    8.2   1.3    3.0  3  PF01099.12 Uteroglobin family
        4.6    6.9  28.1       0.85    9.3   6.7    3.6  4  PF06009.7  Laminin Domain II
          8    4.6  28.8        0.4    8.9   7.3    2.9  3  PF03961.8  Protein of unknown function (DUF342)


Domain annotation for each model (and alignments):
>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.8   0.00021      0.41      50     122 ..      17      75 ..       4     104 .. 0.57
   2 ?    5.0   0.7    0.0054        10      48     138 ..     221     313 ..     209     328 .. 0.66
   3 ?    1.8   0.5     0.049        96      38     125 ..     324     412 ..     310     422 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00021
  PF04582.7  50 svssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevd 122
                 v+++ ++l +++++l d  +  ++++ +l+  ++ev++lq+ vd  s  ++dl              q + d
  MMETSP1325-20131115|799_1  17 EVEAAKEQLKEMKSKLSDEKKEAGKLSKQLQASKKEVTKLQNKVDMNSDVVQDL--------------QVKLD 75 
                444555555555555555555555555555555555555555555555555554..............44333 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0054
  PF04582.7  48 sesvssissklsdlsadlqdvtssldd.vkaelkelstevaalqssvdslsseladlse.lvsahdaalsslqtevdanstdisnlksdvsan 138
                +++ +++ ++lsd   +++d+   +    +++lk+  ++ +al++  ++ ++e ++ ++   ++ ++ + +l+ + +  + +i+ lk  + a 
  MMETSP1325-20131115|799_1 221 DDACKEVETELSDCRDQIDDMPDGITSkDISDLKQAVSHFEALSNRQAADAAETKKETKaQLKEYKEHIRELEYTHEDDTHQIATLKNLLNAS 313
                556666777777777777777777654145677777777777777666666655554441446667777777777777777777777665554 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.049
  PF04582.7  38 taleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsselad.lselvsahdaalsslqtevdans 125
                 +l     s ++ ++++ + l + + +l+d  +   d k   ++  ++v+  ++s++++ ++l++ l ++  + d+ +s  ++ +++n+
  MMETSP1325-20131115|799_1 324 RDLHELLVSKHDELEKAHAALEEREHELEDELHEAIDQKHMAEKHASDVEYQRDSIEKMNAKLTEkLCDTEMELDKWVSAHRERMETNT 412
                55555555666777777888888888888877777777777888899999999999999999975489999999999998888888887 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  13.2    0.0014       2.8      32     132 ..      14     115 ..       3     130 .. 0.90
   2 ?   -1.8   0.0       0.7   1.4e+03     109     133 ..     217     241 ..     201     249 .. 0.75
   3 ?    7.6  16.9   0.00089       1.7      36     177 ..     257     397 ..     245     411 .. 0.78

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0014
  PF13851.1  32 lkeeiaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLk.nlkaklkelekelknlkwesevleqrfekverErdelykkfea 132
                 ++e+++ k++ ++ ++++++ kke  +l+++L++ ++ev++L++k++  +   q+L+ +l   l  + + +++++ +++ + ++ ++ e Er++ +k  ++
  MMETSP1325-20131115|799_1  14 AQKEVEAAKEQLKEMKSKLSDEKKEAGKLSKQLQASKKEVTKLQNKVDMNSDVVQDLQvKLDLALAASGNAMSAMNEAQQEQAKQRAQAEAERRAREKADRD 115
                5789***********************************************99999996688999999999****999999999999*****9987776655 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.7
  PF13851.1 109 sevleqrfekverErdelykkfeaa 133
                ++v+++ +++ve+E  + +++  ++
  MMETSP1325-20131115|799_1 217 EHVMDDACKEVETELSDCRDQIDDM 241
                6788888888888888888877665 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.00089
  PF13851.1  36 iaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErdelykkfeaaiqdvqqktelknllLe..kKlealneelekkeaqLeevlaaanldp 177
                + + ++    +++++a+ ++ +k+ k++Lk+ +e+ +eL+   ++  ++ ++Lknl +  ++l+ + ++l+  +e l  + +++e+   +l+++ ++  +++++ ++ k +  +    +e   +++ek +a+L+e l   +++ 
  MMETSP1325-20131115|799_1 257 VSHFEAL---SNRQAADAAETKKETKAQLKEYKEHIRELEYTHEDDTHQIATLKNLLNASDMLKAQHQDLRDLHELLVSKHDELEKAHAALEEREHELEDELHEAIDQKHMAEKhaSDVEYQRDSIEKMNAKLTEKLCDTEMEL 397
                4444443...45556666666666778899999999999999999999999999999999999999999999999999999999999999999999999999999999988754114688888999999999999888777764 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   6.8   6.3e-05      0.12     208     264 ..      15      71 ..       5     112 .. 0.91
   2 ?    5.2   3.5    0.0033       6.4     168     251 ..     224     308 ..     194     314 .. 0.57
   3 ?   -2.1  14.9      0.53     1e+03     169     286 ..     265     387 ..     243     423 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 6.3e-05
  PF08317.6 208 seeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeae 264
                ++e+e+++e+L+++++k++ ++k+  +l ++lq++kk++++l++k+ +  + +++++
  MMETSP1325-20131115|799_1  15 QKEVEAAKEQLKEMKSKLSDEKKEAGKLSKQLQASKKEVTKLQNKVDMNSDVVQDLQ 71 
                789*****************************************9988777777665 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0033
  PF08317.6 168 lnkklelinsilpklrekkealk.eelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealke 251
                 ++ ++++++  +++ +  +++  + + +L+q+ ++ e  ++ + +++ e  ++++ +++e ++++ ele   ++ +++i++lk+
  MMETSP1325-20131115|799_1 224 CKEVETELSDCRDQIDDMPDGITsKDISDLKQAVSHFEALSNRQAADAAETKKETKAQLKEYKEHIRELEYTHEDDTHQIATLKN 308
                3344555555555555555555314456666666666666666666666666666666666666666666666666666666555 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.53
  PF08317.6 169 nkklelinsilpklrekkealkeelasLrqlkde..leecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekilee...crgfsakeisklkekvs 286
                n++++   ++++++++++++ ke++++L+  +++   ++++ ++l ++ + L++ ++++   ++ l  +++el++ ++++e+ ++++++ l+e  +++++ e+   + +++++ i+k+++k+ 
  MMETSP1325-20131115|799_1 265 NRQAADAAETKKETKAQLKEYKEHIRELEYTHEDdtHQIATLKNLLNASDMLKAQHQDLRDLHELLVSKHDELEKAHAALEEREHELEDELHEAIDQKHMAEKhasDVEYQRDSIEKMNAKLT 387
                445566777777777777777777777776665555666666777777777777777777777777777777777777777666666544444333333333311133566666666666554 PP

>> PF05701.6  Plant protein of unknown function (DUF827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1  17.0   4.7e-05     0.092     263     383 ..      13     123 ..       5     141 .. 0.86
   2 ?    0.1  20.2       0.1     2e+02     165     336 ..     236     410 ..     221     420 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.7e-05
  PF05701.6 263 svtkELeeakanlekaaeeekslrslvesLkqeLeeekkeleelkekekeaeeavssLeaelsrtkseleakeskareelvelslklqqlsseaeeakkeAeeareeveklkee.aeqtkaa 383
                 ++kE e ak++l+++++ ++  ++ ++ L ++L+  kke+ +l+ k  +++ +v +L+++l+            a  ++ +++  ++++++e  + + +Ae+ r++ ek+ +  a++ ++a
  MMETSP1325-20131115|799_1  13 EAQKEVEAAKEQLKEMKSKLSDEKKEAGKLSKQLQASKKEVTKLQNKVDMNSDVVQDLQVKLDL-----------ALAASGNAMSAMNEAQQEQAKQRAQAEAERRAREKADRDkADAERDA 123
                579***************************************************9999999985...........44567789999*****************9999888865414444444 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.1
  PF05701.6 165 kkveeL.....tkeiiamkesleqlkaahaeaeeekikialekeqdreayekelkeaekelerlkedldpekdle.kLaeasaelesLqkeleeakeselesvasvtkELeeakanlekaaeeekslrslvesLkqeLeeekkeleelkekekeaeeavssLeaelsrtkselea.kes 336
                 +++++     +k+i++ k+++ + +a ++++    ++ ++e +++ + y++ ++e e  +e+++ ++ + k+l    +   a++++L++ l+e   s+++ ++++   Lee   +le    e    + ++e   + +e  ++++e++ +k++e+    ++ e el++  s      e+
  MMETSP1325-20131115|799_1 236 DQIDDMpdgitSKDISDLKQAVSHFEALSNRQAADAAETKKETKAQLKEYKEHIRELEYTHEDDTHQIATLKNLLnASDMLKAQHQDLRD-LHELLVSKHDELEKAHAALEEREHELEDELHEAIDQKHMAEKHASDVEYQRDSIEKMNAKLTEKL---CDTEMELDKWVSAHRErMET 410
                55555544444799****************************************************998886655555555666666666.55666777777777777777777777777777778888888888888888888888888888777...78888888877765544344 PP

>> PF01099.12  Uteroglobin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.3   0.00096       1.9      27      53 ..      13      39 ..       6      50 .. 0.89
   2 ?   -1.2   0.0      0.81   1.6e+03      46      63 ..     204     221 ..     198     240 .. 0.67
   3 ?   -0.7   0.0      0.59   1.2e+03      15      28 ..     274     287 ..     262     293 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00096
                ---HHHHHHHHHHHHHHHH--HHHHHH CS
  PF01099.12 27 nadpeaeeaveelKkCvdelseetken 53
                 a++e+e+a+e+lK+   +ls+e+ke+
   MMETSP1325-20131115|799_1 13 EAQKEVEAAKEQLKEMKSKLSDEKKEA 39
                57889********************96 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.81
                 --HHHHHHHHHHHHHHHT CS
  PF01099.12  46 lseetkenikkllekIld 63 
                 l e+++e++++lle ++d
   MMETSP1325-20131115|799_1 204 LEEGKSELLVQLLEHVMD 221
                 566677777777776653 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 0.59
                 -HHHHHHHHHTT-- CS
  PF01099.12  15 seeeYkasLkkyna 28 
                 +++e ka+Lk+y++
   MMETSP1325-20131115|799_1 274 TKKETKAQLKEYKE 287
                 77777888998876 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   6.7   0.00044      0.85       7      70 ..      13      76 ..      10     113 .. 0.89
   2 ?    6.6   2.5     0.003       5.9      16      97 ..     247     323 ..     244     329 .. 0.81
   3 ?    2.7   4.9     0.047        93       2      95 ..     265     356 ..     264     373 .. 0.68
   4 ?    0.3   1.0      0.25     5e+02      18      69 ..     322     373 ..     311     401 .. 0.46

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00044
               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF06009.7  7 eAnetakeVlkelegistnventkaklsklngsveetnekvksankavrdarrsvrkleklapq 70
               eA++ +++ +++l++++ +++ +k++++kl ++++  +++v + ++ v+  ++ v++l+ +++ 
  MMETSP1325-20131115|799_1 13 EAQKEVEAAKEQLKEMKSKLSDEKKEAGKLSKQLQASKKEVTKLQNKVDMNSDVVQDLQVKLDL 76
               7889999999999999999999999999999999999999999999999999999999988876 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.003
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXX CS
  PF06009.7  16 lkelegistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkLkklkkleeasqsrvlsrnisei 97 
                 k+ +++++ v+   a  ++ +++++et++   ++  ++++ ++ +r+le + ++   ++ +lk+l +as    l+++ + +
  MMETSP1325-20131115|799_1 247 SKDISDLKQAVSHFEALSNRQAADAAETKK---ETKAQLKEYKEHIRELEYTHEDDTHQIATLKNLLNASD--MLKAQHQDL 323
                567788888888888888888888777776...6778999999***********************99965..466655555 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.047
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXX CS
  PF06009.7   2 kelakeAnetakeVlkelegistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkLkklkkleeasqsrv..lsrnis 95 
                +  a++A et ke++++l++ ++ + ++    +   ++++  +++++    a +  + + ++l+ l + l++k  +l+k   a + r   l +++ 
  MMETSP1325-20131115|799_1 265 NRQAADAAETKKETKAQLKEYKEHIRELEYTHEDDTHQIATLKNLLN----ASDMLKAQHQDLRDLHELLVSKHDELEKAHAALEEREheLEDELH 356
                56788888888888888888888888887777777776444444443....334444455667777778888888888888887777666666655 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.25
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF06009.7  18 elegistnventkaklsklngsveetnekvksankavrdarrsvrkleklap 69 
                +l ++++ +    ++l+k  + +ee ++++++      d +    k    ++
  MMETSP1325-20131115|799_1 322 DLRDLHELLVSKHDELEKAHAALEEREHELEDELHEAIDQKHMAEKHASDVE 373
                4444444444444444444444444444444333333333333333333333 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   5.8     0.024        46     323     404 ..       5      81 ..       1     139 [. 0.65
   2 ?    3.3   0.6    0.0097        19     335     398 ..     223     289 ..     197     292 .. 0.43
   3 ?    8.9   7.3    0.0002       0.4     316     416 ..     271     365 ..     254     378 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.024
  PF03961.8 323 ievgldepelkeklkeleeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelk.elkee 404
                 +++l++ e+++++++ +e+l+e++++l + kk+  kl+k      + +  k+++ kl+++    ++ +++l+ +l+ +l ++
  MMETSP1325-20131115|799_1   5 AQLALHKGEAQKEVEAAKEQLKEMKSKLSDEKKEAGKLSK------QLQASKKEVTKLQNKVDMNSDVVQDLQVKLDlALAAS 81 
                5555666666666666666666666666666666666666......2333445555555555555555555555555444444 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.0097
  PF03961.8 335 klkeleeeleeleeeleklkkk.....lkklpklkaegqlesekkeqleklletkeklkeeleeleael 398
                  ke+e+el ++++++++  +      ++ l++  a + +e+    q + + etk++ k +l+e ++++
  MMETSP1325-20131115|799_1 223 ACKEVETELSDCRDQIDDMPDGitskdISDLKQ--AVSHFEALSNRQAADAAETKKETKAQLKEYKEHI 289
                334444444444444444444433222222222..1233333333444444444444444444444433 PP

  == domain 3    score: 8.9 bits;  conditional E-value: 0.0002
  PF03961.8 316 elgtkteievgldepelkeklkeleeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeeleskkkeakikv 416
                 ++tk e+++ l+  e+ke ++ele   e+   ++ +lk+ l+  ++lka   + ++ ++ +e l  +  +l++  ++le++ +el++el++   ++k  +
  MMETSP1325-20131115|799_1 271 AAETKKETKAQLK--EYKEHIRELEYTHEDDTHQIATLKNLLNASDMLKA---QHQDLRDLHELLVSKHDELEKAHAALEEREHELEDELHEAI-DQKHMA 365
                5677777777776..99************************999999776...5569999999999999**********************993.334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2678  (0.195875); expected 273.4 (0.02)
Passed bias filter:                      487  (0.0356202); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                        56  (0.00409596); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 2.32u 0.39s 00:00:02.71 Elapsed: 00:00:01.58
# Mc/sec: 809.91
//
Query:       MMETSP1325-20131115|801_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-07   31.0   0.1    2.4e-07   30.7   0.1    1.2  1  PF00615.14 Regulator of G protein signaling domain


Domain annotation for each model (and alignments):
>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.1   1.7e-11   2.4e-07      50     116 ..       2      89 ..       1      91 [. 0.95

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 1.7e-11
                 HHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS.......................--TTTTHHHHHHHHHHHTTHHHHHHHCSHHHH CS
  PF00615.14  50 akeIynkylapsspkelnidkklreeleknleka.....................qpsrklfeeaqeevfrllekdsypkFlkselyl 116
                 a++++ ky+++++++++n+++++++++++++ k                      +ps ++f+ea  e+f+llek ++ +F  s+ + 
   MMETSP1325-20131115|801_1   2 ANSLFVKYCSHDADEQVNLPEHMVKSVREKIDKYytenaspgadettgsserkqrHPSADTFDEARIEIFELLEKGAFYRFKFSPAFV 89 
                 778999************************9999999******************9****************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.63
# Mc/sec: 562.95
//
Query:       MMETSP1325-20131115|795_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-45  151.7   0.0    1.1e-44  151.4   0.0    1.1  1  PF03953.12 Tubulin C-terminal domain


Domain annotation for each model (and alignments):
>> PF03953.12  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.4   0.0   8.1e-49   1.1e-44       6     125 .]       1     126 [.       1     126 [. 0.98

  Alignments for each domain:
  == domain 1    score: 151.4 bits;  conditional E-value: 8.1e-49
                 EB------S-------S---HHHHHHHTTSGGGSSS--------EEEEEEEEE----TTHHHHHHHHHHHTT---B-------EEEEE----S------......-E-EEEEEEGGGHHHHHHHHH CS
  PF03953.12   6 lltgyaPltskekasvektsvqeltrqlfdpknimvscdprkgkYlaiallirgdvspkevekaiqrikekksaqfvewipasikvalckksPyvkkas......vsglmlaNtTaiaelFkrile 125
                 +lt+yaP++s+eka +e++sv+e+t+++f+p ++  +cdpr+gkY+a++l++rgdv+pk+v++a+++ik+k+++qfv+w+p+++k+++++++P+v+++       ++++m+aNtTaiae+++ri++
   MMETSP1325-20131115|795_1   1 MLTSYAPVISAEKAYHEQLSVAEITNAVFEPASMYTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGdlarvmRAVCMVANTTAIAEALSRIDH 126
                 689************************************************************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.68
# Mc/sec: 898.63
//
Query:       MMETSP1325-20131115|796_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-21   76.4   5.4    4.2e-21   75.2   3.8    1.6  1  PF14240.1 YHYH protein


Domain annotation for each model (and alignments):
>> PF14240.1  YHYH protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   3.8   3.1e-25   4.2e-21      10     163 ..     130     304 ..     119     306 .. 0.84

  Alignments for each domain:
  == domain 1    score: 75.2 bits;  conditional E-value: 3.1e-25
  PF14240.1  10 ptlastptslsl.gavGvalnGvpidpaaae................aanegedaatle...........................glDecggHvqptgaYHYHgapeclleeaeedsesaliGyaaDGFpIYgekeeegatdassalkklsssgtyvqdyeyvagsgdLDecnGrtgvt...........gtYhYhvtdeypyiircl 163
                p++++ p++ +l g+vG++l+Gv+i+++ +                 +                                      +lD+cggH+     YHYH+  +c ++  + +++s+liG a+DG+ +Yg +e+ +++                     + +++dLD cnG+t              + YhYh+++ +py+i+c+
  MMETSP1325-20131115|796_1 130 PAYETGPNAAPLrGRVGLSLSGVNIYGPEEAgfgvgaamdpcedntgE----------CyagldvptcesslditcgnttnvkheiMLDSCGGHAM---PYHYHNDLKCDYDH-TLEGHSPLIGIALDGYGVYGLYESYEDD--------------------TQIKPSDLDTCNGHTATVpandtygvtatSVYHYHTSSWAPYTIGCY 304
                7788888888888****************9889888765554444441..........1445666666677777777777788888**********...7***********95.7789*****************9987776....................4567***********99999**************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:01.24
# Mc/sec: 796.21
//
Query:       MMETSP1325-20131115|803_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.88
# Mc/sec: 441.15
//
Query:       MMETSP1325-20131115|805_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.63
# Mc/sec: 445.04
//
Query:       MMETSP1325-20131115|804_1  [L=451]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-37  129.3   0.0    1.4e-37  129.1   0.0    1.0  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
     0.0022   17.2   0.6     0.0065   15.8   0.4    1.8  1  PF02809.15 Ubiquitin interaction motif
  ------ inclusion threshold ------
      0.054   12.8   0.0        0.4    9.9   0.0    2.0  2  PF13423.1  Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.1   0.0   3.1e-41   1.4e-37      14     272 .]       1     447 [.       1     447 [. 0.96

  Alignments for each domain:
  == domain 1    score: 129.1 bits;  conditional E-value: 3.1e-41
                 HHHHHHHHHHTSHHHHHHHHTTHCCH....H-TTHHTTTHHHHHHHHHHHHH--HHH-SSS---HHHHHHHHHHBGGGG.....GC.TTS-HHHHHHHHHHHHHHHHHHHCCHHHHSTTS-....-SCHHHHC-EEEEEEEEETTCEEE........................................................EEEECCB-SEEEEEEE-EEEETTTTEE..........EE-----B--SEEE-GGGBSCHHH.........................................................................................................................--BTTSSCEEEEEEEEEE--.-TT---EEEEEESS-TT-EEEEETTEEEEE-HHHHTTC.......EEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................................xxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxx.........................................................................................................................xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxx RF
  PF00443.24  14 YmnsvlQcLvsipelrdyllryeervaeineeneleeeaqlaraladlfkklvenssekkavsPsefkktlkkineqfs.....gy.kQqDahEfllflLdqlhedlnrlnkkektekqkaedsndslitdlfkgqlksrlkclecknv........................................................kvklkrlPeiLiihlkRfkyseerssn..........kKlnekvefpleLdlssyvneekk.........................................................................................................................eeseskpkkYeLvavvvHsG.slssGHYvayvknneknkWlkfdDetvtevkeeevlke.......saYvlfY 272
                 Ymns+lQcL  +pel++ l      +   +   + + +  l +ala+ ++++    ++++a++P  f+++l++i +qf+     g+ kQqDa+E+l++ + +l+++l+ ++   + +        ++l++ lf+ +++ +  c ec ++                                                        + ++krlP++ ++++ Rf+ ++++ ++           K+ + v+fp+ Ld+  +++++ +                                                                                                                           + + + +YeL++++ H G  +++GHY+ +v+ ++ + Wl fdD+ vt+vk+e+++          aY+ fY
   MMETSP1325-20131115|804_1   1 YMNSTLQCLRGVPELKEGLHAFTPGQ---DGAASIGGSDMLTQALAKTMYEV---DRTTNAYAPGDFLNILRQIMPQFAetgpgGIpKQQDAEELLSTTMSSLSNSLKTAHGLADLGGA------SNLVDALFGLEMEVKDTCDECPEEpsvsetrtdrkltcfiqggggstahvdhlhegvklgltekiekissvlgreavwtrTSRVKRLPRYVVVQFMRFYVKRDNVIEegrqvvkhikCKIMRPVTFPEVLDVYDFCDDNIQkllktnrdrhgdeilgdlkvtaaaassgdglsasepaameveaeggataaaaaaeggddtaaaggggggdastadpsevkvdamdedgeddaalqaalamsmgaeapagaaaaeaevvagpGLTADFQGNYELFGITTHKGrLADGGHYMGWVR-QDGDDWLLFDDSDVTPVKTEDIMALkgggdhhMAYLAFY 447
                 9******************9999888...7889*******************...999*************************9666**********************9887776664......89************************************************************************************************88888888788888888889*******************9999************************************************************************************************************************978888899************99***********.99****************998888778999999*****9 PP

>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.4   1.4e-06    0.0065       2      15 ..     343     356 ..     342     358 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.4e-06
                 CCHHHHHHHHHHHH CS
  PF02809.15   2 sEEedLqlALalSl 15 
                 ++++ Lq+ALa+S+
   MMETSP1325-20131115|804_1 343 EDDAALQAALAMSM 356
                 89***********9 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0     0.086   3.9e+02      81     149 ..      76     144 ..      36     166 .. 0.70
   2 ?    9.9   0.0   8.8e-05       0.4     252     294 ..     382     421 ..     365     422 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.086
  PF13423.1  81 e......qqdvqeanrFileqlslelltlkvdifhererdkseaesslselfgtklisqnrciscqaekvkeesl 149
                       qqd +e+    +  ls+ l+t           d + a++  + lfg++++ + +c +c +e ++ e+ 
  MMETSP1325-20131115|804_1  76 GpggipkQQDAEELLSTTMSSLSNSLKTAHG------LADLGGASNLVDALFGLEMEVKDTCDECPEEPSVSETR 144
                2455555666666666666666666666653......35677778888889999999999999998887666654 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 8.8e-05
  PF13423.1 252 efkyeLqavVchigdsltsghlvSlirvaeseksqWylFnDfr 294
                + +yeL ++  h+g   + gh+   +r    + ++W lF+D+ 
  MMETSP1325-20131115|804_1 382 QGNYELFGITTHKGRLADGGHYMGWVRQ---DGDDWLLFDDSD 421
                558*************************...5779******75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.79u 0.39s 00:00:01.18 Elapsed: 00:00:00.64
# Mc/sec: 1688.68
//
Query:       MMETSP1325-20131115|809_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   13.8   0.2      0.034   13.6   0.1    1.1  1  PF03007.11 Wax ester synthase-like Acyl-CoA acyltransferase domain


Domain annotation for each model (and alignments):
>> PF03007.11  Wax ester synthase-like Acyl-CoA acyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   2.5e-06     0.034     152     220 ..      21      85 ..      16      96 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.5e-06
  PF03007.11 152 lldldpdpaprpevpqvpppdrrtqlrasgilvglaaglgkvlgsvagvvssagrlleaalearsvvlp 220
                 +++ +p+p+p pe     +++ ++++ ++g  +gl a++gk +g+v gvv+ ++++ ++ ++a+  +++
   MMETSP1325-20131115|809_1  21 MITPEPEPEPEPELSA--KEA-ELEALRAG-EAGLPAAVGKTVGGVMGVVDAVKNAPASTKKAVDDAVT 85 
                 5555555555555555..555.55555555.79999999999999999999999888877755444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.43s 00:00:00.80 Elapsed: 00:00:00.60
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|807_1  [L=356]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.044   12.9   1.8      0.095   11.9   1.2    1.6  1  PF07623.6 Protein of unknown function (DUF1584)


Domain annotation for each model (and alignments):
>> PF07623.6  Protein of unknown function (DUF1584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.2   6.9e-06     0.095       8      20 ..      76      88 ..      74      89 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.9e-06
  PF07623.6  8 PGeePEGSRPSAt 20
               PGe PE+ RPSA+
  MMETSP1325-20131115|807_1 76 PGEDPESFRPSAR 88
               9***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.63
# Mc/sec: 1354.13
//
Query:       MMETSP1325-20131115|810_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.5   0.1      0.034   14.1   0.0    1.1  1  PF08702.5  Fibrinogen alpha/beta chain family
      0.038   13.8   6.2      0.097   12.5   1.4    2.3  2  PF00170.16 bZIP transcription factor
      0.051   12.9   0.2      0.077   12.3   0.1    1.2  1  PF07307.6  Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
       0.15   12.3   1.5        1.8    8.9   0.7    2.4  3  PF13600.1  N-terminal domain of unknown function (DUF4140)
       0.38   10.8   2.4        0.6   10.1   0.4    1.9  2  PF00804.20 Syntaxin
       0.81    9.6   3.4        2.4    8.1   0.2    2.8  3  PF03449.10 Transcription elongation factor, N-terminal


Domain annotation for each model (and alignments):
>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.5e-05     0.034      32     115 ..      76     159 ..      67     161 .] 0.93

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.5e-05
                CCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF08702.5  32 kdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLqevlrs 115
                k+++ ++++le+l+ +++  ++ ie+ + +i++   ++ +    +d +   +  +l  + +l    k +++ + +++Lq+ +++
  MMETSP1325-20131115|810_1  76 KQYEARVKELESLMSEAQSVNSAIEKRIADIQNLKLGDVPPVPGDDPTSAVTMGNLDDECVLSTSSKCVEYRKALEQLQNEIAK 159
                67899************************************9999999999999******9*******************9976 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.4   4.3e-05     0.097      25      57 ..      72     104 ..      71     110 .. 0.81
   2 ?    3.3   0.1     0.032        73      43      59 ..     144     160 ..     133     161 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.3e-05
                 HHHHHHHHHHHHHHHHHH.......HHHHHHHH CS
  PF00170.16  25 kaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                 +++++++e +vkeLe+ +++ ++ ++ ++k +a
   MMETSP1325-20131115|810_1  72 EERCKQYEARVKELESLMSEAQSVNSAIEKRIA 104
                 689***************877777777777666 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.032
                 .......HHHHHHHHHH CS
  PF00170.16  43 kaLkkeleelkkevakl 59 
                  +++k le+l++e+ak+
   MMETSP1325-20131115|810_1 144 VEYRKALEQLQNEIAKM 160
                 57899999999999987 PP

>> PF07307.6  Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.4e-05     0.077     100     143 ..      64     107 ..      55     111 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.4e-05
  PF07307.6 100 aeaikeinekkiklYekesetveellesvktiesaLlaklaehf 143
                 e     ne++ k Ye  ++++e+l+++ + ++sa+ +++a+  
  MMETSP1325-20131115|810_1  64 DEECDMSNEERCKQYEARVKELESLMSEAQSVNSAIEKRIADIQ 107
                5555667*******************************999975 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.85   1.9e+03      20      38 ..      48      66 ..      40      67 .. 0.77
   2 ?    8.9   0.7   0.00077       1.8      67     101 ..      70     104 ..      52     107 .. 0.85
   3 ?    1.1   0.0      0.22   4.9e+02      69      88 ..     140     159 ..     126     161 .] 0.73

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.85
  PF13600.1 20 eaGehelriegLpasldpk 38
               e+Ge+  r ++Lp+sld++
  MMETSP1325-20131115|810_1 48 ESGETVDRTTELPKSLDEE 66
               5788888889999999985 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00077
  PF13600.1  67 aaseelaeleaelraledelarleaekealearia 101
                +++e+ ++ ea++++le+ ++++++ ++a e+ria
  MMETSP1325-20131115|810_1  70 SNEERCKQYEARVKELESLMSEAQSVNSAIEKRIA 104
                678899**************************998 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.22
  PF13600.1  69 seelaeleaelraledelar 88 
                s +  e +++l++l++e+a+
  MMETSP1325-20131115|810_1 140 SSKCVEYRKALEQLQNEIAK 159
                55556677888888888876 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.4   0.00026       0.6      17      71 ..      54     109 ..      48     130 .. 0.74
   2 ?    0.6   0.0      0.24   5.4e+02      42      56 ..     145     159 ..     118     161 .] 0.71

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00026
  PF00804.20  17 ekisekveelkrlhsrilaspdpd.kqtkeeleeltaeikklankirskLksleqs 71 
                 ++++e+ + l+++   +  +  ++ +++ +ele+l+ e +   ++i++++ ++++ 
   MMETSP1325-20131115|810_1  54 DRTTELPKSLDEECDMSNEERCKQyEARVKELESLMSEAQSVNSAIEKRIADIQNL 109
                 555555555666665555555533688999***********************987 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.24
  PF00804.20  42 qtkeeleeltaeikk 56 
                 + ++ le+l++ei k
   MMETSP1325-20131115|810_1 145 EYRKALEQLQNEIAK 159
                 466677777777755 PP

>> PF03449.10  Transcription elongation factor, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.2     0.001       2.4      50      73 ..      70      93 ..      68      95 .. 0.91
   2 ?    0.2   0.0      0.31     7e+02      57      67 ..      98     108 ..      95     110 .. 0.85
   3 ?   -0.5   0.0      0.51   1.2e+03      15      24 ..     147     156 ..     136     161 .] 0.56

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.001
  PF03449.10 50 aakeeqreieaRireLedrLerae 73
                +++e+ ++ eaR++eLe+ +++a+
   MMETSP1325-20131115|810_1 70 SNEERCKQYEARVKELESLMSEAQ 93
                578999***************997 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.31
  PF03449.10  57 eieaRireLed 67 
                  ie+Ri+++++
   MMETSP1325-20131115|810_1  98 AIEKRIADIQN 108
                 699****9996 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.51
  PF03449.10  15 keeleeLkkv 24 
                 ++ le+L+++
   MMETSP1325-20131115|810_1 147 RKALEQLQNE 156
                 4444444442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1082  (0.0791398); expected 273.4 (0.02)
Passed bias filter:                      814  (0.0595377); expected 273.4 (0.02)
Passed Vit filter:                        92  (0.00672908); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.43s 00:00:00.97 Elapsed: 00:00:00.83
# Mc/sec: 464.84
//
Query:       MMETSP1325-20131115|812_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-14   52.5   0.4    4.2e-14   52.0   0.3    1.1  1  PF01062.16 Bestrophin, RFP-TM, chloride channel
    0.00031   19.4   0.7    0.00041   19.0   0.1    1.4  2  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.3   6.2e-18   4.2e-14     161     288 ..      18     150 ..       5     157 .. 0.86

  Alignments for each domain:
  == domain 1    score: 52.0 bits;  conditional E-value: 6.2e-18
  PF01062.16 161 leksknkpywvpivwaesl.qkarkegrlddi..alkaldeelnelrealggleridwtpiPlaYtqlvhlavylyflllpfglqd..eldlvtplltvlqfyffvglekvaeeLenPFGeddddlelnalcr 288
                 l +++  +++++++w+++l ++ +++g l+     ++++ +e  +   +++  e+  ++ +P+ + q +  ++++  +++p+      e +++ +++t+l  ++++ +  +a+e+e PFG d++dl+l  l +
   MMETSP1325-20131115|812_1  18 LDENSEERCFILLQWIQRLiMDSQANGVLSAPapIISRVFQEFGQGIVNIQDAEKLTTVKFPFPFAQTLSAMLVFISIITPIVSGIliENWYWAVVFTFLSVFCLFSINNIAMEIELPFGDDPNDLPLHELQK 150
                 446788999**************9999955442379999999999999*******************999998888888888544466999*************************************99954 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.24   1.6e+03      90     104 ..      52      66 ..      45      67 .. 0.85
   2 !   19.0   0.1   6.1e-08   0.00041     128     166 ..      87     125 ..      82     166 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 0.24
  PF07690.11  90 lvlrvlqGlgagalf 104
                 +++rv+q +g+g+++
   MMETSP1325-20131115|812_1  52 IISRVFQEFGQGIVN 66 
                 799*******99875 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 6.1e-08
  PF07690.11 128 sagfslGailgpllggllasslgWravFlilailsllaa 166
                 sa+  + +i++p+++g+l++++ W +vF +l +++l+++
   MMETSP1325-20131115|812_1  87 SAMLVFISIITPIVSGILIENWYWAVVFTFLSVFCLFSI 125
                 78888999****************************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       650  (0.0475424); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.42s 00:00:00.99 Elapsed: 00:00:00.72
# Mc/sec: 802.11
//
Query:       MMETSP1325-20131115|814_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-22   79.7   0.5    3.5e-22   78.8   0.4    1.4  1  PF00742.14 Homoserine dehydrogenase
  ------ inclusion threshold ------
      0.081   11.7   1.2       0.15   10.8   0.7    1.4  1  PF04029.9  2-phosphosulpholactate phosphatase


Domain annotation for each model (and alignments):
>> PF00742.14  Homoserine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.4   5.1e-26   3.5e-22      59     179 .]      15     162 ..       4     162 .. 0.97

  Alignments for each domain:
  == domain 1    score: 78.8 bits;  conditional E-value: 5.1e-26
  PF00742.14  59 eDveGlDaarKllIlarlafgleleledvevegiskltle............................dieeakekgkvlrlvaeaereeekleasvkpelvpkehplasvkgsdnavsietdrl..gelvisGpgaGaevTAsavlsDll 179
                 +D++GlD  rK++Ilar+ +g++++ledv++  + + + +                            ++e+a +++kvlr+  e++   e+ ++++ +++v++++pl+++k+++n+v+++t+r+   +++++G  aGa+  As++++Dll
   MMETSP1325-20131115|814_1  15 KDLSGLDLRRKVVILARE-IGMDINLEDVTCDTLLPDSIKnkeyagdsaevsaavaadmkemdammdeKLEAALAEEKVLRYKFEIDV--ESNTCKIMLVAVDNKDPLYRLKENENLVAFHTERYndAPMIVKGSAAGADLAASGIFADLL 162
                 7*****************.*****************999999********************************************98..899********************************999*********************96 PP

>> PF04029.9  2-phosphosulpholactate phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.7   2.2e-05      0.15     135     213 ..      25     103 ..      20     116 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.2e-05
  PF04029.9 135 evvivcagtegkfslEDvlcAgaiaklllkegee.aelndealaalelyksdekdllellkksshakrlkklgleeDlef 213
                +vvi++      ++lEDv c  ++ + +++++ +  +++ +a++a+++ +     + e+l+++   ++++++++e D+e 
  MMETSP1325-20131115|814_1  25 KVVILAREIGMDINLEDVTCDTLLPDSIKNKEYAgDSAEVSAAVAADMKEM-DAMMDEKLEAALAEEKVLRYKFEIDVES 103
                6777777778899****************9998754444455555555555.688999*******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.67
# Mc/sec: 618.76
//
Query:       MMETSP1325-20131115|817_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.64
# Mc/sec: 202.19
//
Query:       MMETSP1325-20131115|819_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.32s 00:00:00.63 Elapsed: 00:00:00.57
# Mc/sec: 247.90
//
Query:       MMETSP1325-20131115|816_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-17   61.2   0.0    2.4e-16   59.9   0.0    1.6  2  PF00208.16 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
     0.0059   13.9   0.1      0.034   11.4   0.0    1.8  2  PF05088.7  Bacterial NAD-glutamate dehydrogenase


Domain annotation for each model (and alignments):
>> PF00208.16  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   0.0   3.5e-20   2.4e-16     111     200 ..      29     121 ..       2     152 .. 0.81
   2 ?   -2.2   0.0      0.32   2.2e+03     183     203 ..     271     291 ..     259     312 .. 0.72

  Alignments for each domain:
  == domain 1    score: 59.9 bits;  conditional E-value: 3.5e-20
                 CCSS-SEEEE-.SSTTSBSTTHHHHHH....HTT-SEEE-SSSS-BSHHHHH.HHHHTT-EEE-HHHHT----HHHHHHHHHHHCTS---HHHHHH CS
  PF00208.16 111 weikvDilvPc.Atqneineenakeli....kngvklvvEgANmpltqeake.ileeagilvapdkaaNaGGVtvSalEmlqnsqrlswteeevde 200
                 +++ +D +vP+ ++++ +n++n ++ +    +   +lvvEgAN+++t+ea + ++eeag+ +++d +aN+ GV++S+ E+  +   +  +++e+++
   MMETSP1325-20131115|816_1  29 NRVVADAFVPAgGRPGTVNQDNWESFLlpdgTPSSPLVVEGANLFITHEARQkLFEEAGVEIVKDSSANKCGVICSSYEIMSS---MLLSDDEFHA 121
                 45689*******************88888886689***************9989***************************99...4457777665 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.32
                 HHHHHHCTS---HHHHHHHHH CS
  PF00208.16 183 Emlqnsqrlswteeevdeklk 203
                 +ml+ ++  sw++e+++e+  
   MMETSP1325-20131115|816_1 271 NMLAMLEASSWSDETAKENAL 291
                 466666678899998887643 PP

>> PF05088.7  Bacterial NAD-glutamate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0     5e-06     0.034    1056    1098 ..      66     109 ..      63     144 .. 0.89
   2 ?   -0.6   0.0     0.021   1.4e+02    1230    1285 ..     196     252 ..     184     311 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5e-06
  PF05088.7 1056 vgEGgNLGvTqlgRie.falkggrintDaiDNsaGVdcSDhEVN 1098
                 v EG+NL +T ++R   f ++g++i  D   N  GV cS  E+ 
  MMETSP1325-20131115|816_1   66 VVEGANLFITHEARQKlFEEAGVEIVKDSSANKCGVICSSYEIM 109 
                 89************97588999*****************99985 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.021
  PF05088.7 1230 eyFPkelr....erfaeeiekHrLrreiiatvlaNevvnrlGitfvsrlaeetgasvaev 1285
                    Pk+l+    erf++++ +  +++  +a +la ++v r Gi fv+   e++  ++  +
  MMETSP1325-20131115|816_1  196 GHLPKKLEaeawERFEANVPSQYIKNA-VASTLASRIVYREGIRFVEDRGEDARPEA--A 252 
                 445555542222567777777666655.55567888999999998887655543333..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.39s 00:00:01.08 Elapsed: 00:00:00.60
# Mc/sec: 1290.04
//
Query:       MMETSP1325-20131115|821_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 404.90
//
Query:       MMETSP1325-20131115|815_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-27   97.0   0.1    1.5e-27   96.6   0.1    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.1   1.1e-31   1.5e-27       4     154 ..      58     236 ..      55     238 .. 0.80

  Alignments for each domain:
  == domain 1    score: 96.6 bits;  conditional E-value: 1.1e-31
                 XXXXXXXXXXX.XXXXXX.---........-TTTTT--------TTT------------------S--TT--.STT.-----...--S-TT.THHHH---HHHHHHHHTT---------------.................---------..-----------STTT----TTTTT------ CS
  PF00504.16   4 eldgslpgdlg.fDplglskdp........tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawae.aggls...lptllalqillligflelareqelkapesegsekraypGg.................lgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvvq 154
                 el g++++ ++ fDpl+l++++        t+ +lr+aE++HGR+AM a++G++++ ++ k++      ++p  ++ a g++   +p+++ +qi+ +++++el+ e  l +     ++k ++ G+                  + dp+g++   ++e+ka   +kEi+nGRlA i+++g++++
   MMETSP1325-20131115|815_1  58 ELAGKCNPAVKfFDPLNLAEQNfwgtseeaTIGFLRHAEIKHGRIAMFAFVGFIAQSNGVKWPWPMTLEGTPFPTDaAPGAQwdaIPSAAKWQIICFAAIFELWGEGALATH----YMKGGKAGEfpsfkdgdislphpvpfDLYDPFGFSkkASAEKKAAGLVKEINNGRLAQIGIMGCLAE 236
                 68899999999*******9777999************************************555444444454333133322235999***************866665433....455555565666677788888888875599****998889999999******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.59
# Mc/sec: 1088.51
//
Query:       MMETSP1325-20131115|823_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.64
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|822_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-11   41.3   0.1    7.8e-05   21.5   0.0    2.2  2  PF00036.27 EF hand
    1.6e-09   36.7   0.3     0.0013   18.3   0.0    2.2  2  PF13405.1  EF-hand domain
    7.1e-07   29.1   0.7    6.1e-06   26.1   0.3    2.0  1  PF13499.1  EF-hand domain pair
    1.1e-05   24.7   0.5    0.00017   20.9   0.0    1.7  2  PF13833.1  EF-hand domain pair
    4.1e-05   22.6   0.1        0.2   10.9   0.0    2.3  2  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.053   13.4   0.1       0.13   12.1   0.1    1.5  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   3.4e-08   7.8e-05       2      28 ..      49      75 ..      48      76 .. 0.94
   2 !   17.9   0.0   4.9e-07    0.0011       2      26 ..      89     113 ..      88     116 .. 0.92

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 3.4e-08
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                lk aF++ D D+d +Is++E+ +++++
   MMETSP1325-20131115|822_1 49 LKAAFEHSDLDHDHTISLDELSKMVRH 75
                799*********************986 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 4.9e-07
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 +k++F+ +D D++G I+++E ++++
   MMETSP1325-20131115|822_1  89 VKRLFDFLDADQSGSIEVSEVLAFC 113
                 799*****************99886 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   5.5e-07    0.0013       2      28 ..      49      75 ..      48      82 .. 0.91
   2 !   16.6   0.1     2e-06    0.0046       3      27 ..      90     114 ..      88     118 .. 0.90

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 5.5e-07
               HH---GCC-------B---HHHHHHH. CS
  PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrk 28
               l++aF++ D d+d +i+++EL ++ r+
  MMETSP1325-20131115|822_1 49 LKAAFEHSDLDHDHTISLDELSKMVRH 75
               899******************999885 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 2e-06
                H---GCC-------B---HHHHHHH CS
  PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                +++F+ +D d++G i+ +E+++++ 
  MMETSP1325-20131115|822_1  90 KRLFDFLDADQSGSIEVSEVLAFCD 114
                79*****************999875 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.3   2.7e-09   6.1e-06       2      66 .]      49     113 ..      48     113 .. 0.85

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 2.7e-09
  PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                lk aF+  D d+d +++ +eL ++ +h     +d   ++ + ++f+ lD +++G +  +E l+++
  MMETSP1325-20131115|822_1  49 LKAAFEHSDLDHDHTISLDELSKMVRHVMGVPHDVLPDKHVKRLFDFLDADQSGSIEVSEVLAFC 113
                7889***********************98777755555555555****************99875 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00071       1.6      30      52 ..      52      74 ..      48      75 .. 0.87
   2 !   20.9   0.0   7.7e-08   0.00017       1      47 [.      60     109 ..      60     113 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00071
  PF13833.1 30 lfrefDtdgdGkisfeEFcvlle 52
                f + D+d+d  is++E  ++++
  MMETSP1325-20131115|822_1 52 AFEHSDLDHDHTISLDELSKMVR 74
               58999************998876 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 7.7e-08
  PF13833.1   1 ekGlItreeLkral.allglkg..lseeevdilfrefDtdgdGkisfeEF 47 
                +++ I+ +eL++++   +g+++  l ++ v  lf+ +D+d++G i   E 
  MMETSP1325-20131115|822_1  60 HDHTISLDELSKMVrHVMGVPHdvLPDKHVKRLFDFLDADQSGSIEVSEV 109
                5889**********8888*****999999***************987775 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0002      0.46       1      25 []      49      73 ..      49      73 .. 0.91
   2 !   10.9   0.0     9e-05       0.2       2      20 ..      90     108 ..      89     112 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0002
               HHHHHHHH--S----B-HHHHHHHH CS
  PF13202.1  1 lkdtFrafDlNgDGkIsreELkrlv 25
               lk++F+  Dl+ D +Is +EL+++v
  MMETSP1325-20131115|822_1 49 LKAAFEHSDLDHDHTISLDELSKMV 73
               78899999*************9976 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 9e-05
                HHHHHHH--S----B-HHH CS
  PF13202.1   2 kdtFrafDlNgDGkIsreE 20 
                k +F+ +D++ +G I  +E
  MMETSP1325-20131115|822_1  90 KRLFDFLDADQSGSIEVSE 108
                568************9988 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0011       2.4      77     111 ..      31      70 ..      25      72 .. 0.73
   2 ?   12.1   0.1   5.8e-05      0.13      59     109 ..      52     108 ..      40     113 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0011
  PF10591.4  77 aplraplvklehCi.....keffksCDadkdkkisleEWc 111
                + +r++l+    C+     k  f++ D+d+d++isl+E +
  MMETSP1325-20131115|822_1  31 EYIRHHLMAAAYCMggmnlKAAFEHSDLDHDHTISLDELS 70 
                56777777777776333335569999*********99965 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 5.8e-05
  PF10591.4  59 kFnqlDtnkdkvlsksElaplrapl......vklehCikeffksCDadkdkkisleE 109
                 F++ D ++d+ +s  El+++ +++      v  ++ +k++f+  Dad+ ++i+++E
  MMETSP1325-20131115|822_1  52 AFEHSDLDHDHTISLDELSKMVRHVmgvphdVLPDKHVKRLFDFLDADQSGSIEVSE 108
                69999999***********999888676666667888999************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.83
# Mc/sec: 349.35
//
Query:       MMETSP1325-20131115|813_1  [L=309]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-82  274.9   1.5    4.7e-82  274.6   1.0    1.1  1  PF01716.13 Manganese-stabilising protein / photosystem II polypeptide


Domain annotation for each model (and alignments):
>> PF01716.13  Manganese-stabilising protein / photosystem II polypeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  274.6   1.0   3.4e-86   4.7e-82       2     244 ..      65     307 ..      64     308 .. 0.93

  Alignments for each domain:
  == domain 1    score: 274.6 bits;  conditional E-value: 3.4e-86
  PF01716.13   2 kqsltydeikgtGlankcpeleetargsieleagkkykvkdlclePteflvkeepvnkr..qeaefvktklltrlttsldqisgdlkveadgsltfkekdGidfqavtvqlpGGervpflftiknlvaktepdatsintstdfkGefkvPsyrgasfldPkgrGlatGydnavalpaaa...deeelakenvkrtalskGkislkvakvdaetGeiaGvfesiqpsdtdlGakepkdvkirGvfyarv 244
                 + +l+y+++kgtGlan+c +   +  +++e++ g   ++ dlcleP+ f+v e  ++k+  +++efv+tkl+tr+t++ld isg +kv+  g ++f e dGid++a+tvqlpGG+rvpflft+k+lvak+ +d ++++   +f G+f vPsyr+  fld kgrG+a Gyd a alpa +   +e el +en+k++ +  G+i ++v  v++e  e+ Gvf s qpsdtd+G+ke+k++ ++Gvfya++
   MMETSP1325-20131115|813_1  65 RAQLSYLQVKGTGLANRCSTAVGS--DNLEVKQGA--QIVDLCLEPKAFFVEESVQTKQgvTKTEFVSTKLMTRQTYTLDGISGPVKVNG-GKIQFDEADGIDYAATTVQLPGGDRVPFLFTVKDLVAKGAKDGSAFKPGYEFGGKFVVPSYRTGLFLDSKGRGMAIGYDMAQALPALQsgeEEAELFNENNKKFDVLDGSIEFEVQAVNKEESEMSGVFVSAQPSDTDMGGKEAKKLLLKGVFYAKL 307
                 6799**************875544..677777777..9****************9999844589************************85.99**********************************************************************************9854111344799**********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.40s 00:00:01.01 Elapsed: 00:00:00.59
# Mc/sec: 1255.04
//
Query:       MMETSP1325-20131115|825_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-55  186.6   0.0    4.5e-55  186.4   0.0    1.0  1  PF00069.20 Protein kinase domain
    2.8e-24   85.5   0.0    3.5e-24   85.2   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    4.2e-07   30.0   2.7    8.3e-07   29.0   1.9    1.5  1  PF00433.19 Protein kinase C terminal domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.4   0.0   9.9e-59   4.5e-55      46     259 ..       4     215 ..       1     216 [. 0.94

  Alignments for each domain:
  == domain 1    score: 186.4 bits;  conditional E-value: 9.9e-59
                 HHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--.....HHHHHTSGG CS
  PF00069.20  46 vrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRlt.....aeeilkhpw 259
                 + E ++l  ++H +iv l  +f+++d+l++vl+y+ gg+lf +l k gk+ e  ++++a +i  +ley+H+  ii+rDLKpeN+Lld  g+++++DFGl+k+  +++s+ +++++gt+eY+APE+l+ +++++++vD+WslG +lye+ltg +pf+ +   d+++l+eki++ +l+++++ s    e +k++++ ll++dp+ Rl      aeei++  +
   MMETSP1325-20131115|825_1   4 RTERSVLGYVRHRFIVGLNMAFQTRDKLFFVLDYCAGGELFFHLGKLGKFPEVRACFYAAEITLALEYVHQLDIIYRDLKPENVLLDGAGHVRLTDFGLSKEGiTNNSSGANSFCGTPEYLAPEILN-RQGHGRAVDWWSLGALLYEMLTGLPPFYCR---DREKLFEKIRSAELSYPRYLS----ELAKSILRGLLTRDPSLRLGsgptdAEEIKQGHF 215
                 45999************************************************************************************************987888999*****************.****************************99...9*************9999877....89****************9877777777776655 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.0   7.6e-28   3.5e-24      50     249 ..       5     199 ..       1     201 [. 0.89

  Alignments for each domain:
  == domain 1    score: 85.2 bits;  conditional E-value: 7.6e-28
                 HHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS CS
  PF07714.12  50 eeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeR 249
                 +e +++  ++h+ iv l  ++ ++++l++v++y++gG+L   L k    k+   + + +a++i  ++ey ++ +++ rdL   NvLl+   +v+++DfGL+++  + ++ +  ++     +++apE+l+++    + D Ws G ll+E++t g  p+   + e+++e++++  +l+ p++ +e  +++++  ++++p+ R
   MMETSP1325-20131115|825_1   5 TERSVLGYVRHRFIVGLNMAFQTRDKLFFVLDYCAGGELFFHLGKL--GKFPEVRACFYAAEITLALEYVHQLDIIYRDLKPENVLLDGAGHVRLTDFGLSKEGIT-NNSSGANSFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLT-GLPPFYCRDREKLFEKIRS-AELSYPRYLSELAKSILRGLLTRDPSLR 199
                 68899999***********************************997..999999999*********************************************9954.44444555556779******************************.8899999999999999976.5688888888888888877777777666 PP

>> PF00433.19  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   1.9   1.8e-10   8.3e-07       2      46 ..     237     278 ..     236     281 .. 0.92

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 1.8e-10
                 -SSTTXXTCCTCCCCTS-SS---..--HHHHTT--GGGGTT--EE CS
  PF00433.19   2 vksptDTsNFDpeFteesvtdtpigadsspltsskqenFrGFtYv 46 
                 v++  DTs FD eFt+++ +  p  +++++   s++  F GFt++
   MMETSP1325-20131115|825_1 237 VTGSLDTSQFDREFTSMPIMS-P--DSKENALGSHDTTFAGFTFT 278
                 89999***************5.5..9******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.61
# Mc/sec: 1174.61
//
Query:       MMETSP1325-20131115|824_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-15   56.0   0.9      5e-15   55.1   0.6    1.5  1  PF00249.26 Myb-like DNA-binding domain
    7.7e-06   25.8   0.1    1.5e-05   24.8   0.1    1.5  1  PF13921.1  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   0.6   7.4e-19     5e-15       2      47 ..       8      51 ..       7      52 .. 0.97

  Alignments for each domain:
  == domain 1    score: 55.1 bits;  conditional E-value: 7.4e-19
                TSS-HHHHHHHHHHHHHTTS-.HHHHHHHCTTTS-HHHHHHHHHHH CS
  PF00249.26  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                grWT+eE+e+++++ +++G++ W ++a+ +  +Rt  q++s+ qky
   MMETSP1325-20131115|824_1  8 GRWTQEEHERFLQGLELFGKK-WTKVAEVVR-TRTTVQVRSHAQKY 51
                9********************.*********.*************9 PP

>> PF13921.1  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.1   2.2e-09   1.5e-05       1      43 [.      10      51 ..      10      61 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 2.2e-09
  PF13921.1  1 WtdeEdeiLlklveeygndWseIaeelgrRtplacqdrwknkL 43
               Wt+eE e+ l+  e +g++W+++ae  + Rt  +++ + ++  
  MMETSP1325-20131115|824_1 10 WTQEEHERFLQGLELFGKKWTKVAEVVRTRTTVQVRSHAQK-Y 51
               ***************************77******999887.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       477  (0.0348888); expected 273.4 (0.02)
Passed bias filter:                      376  (0.0275015); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 953.75
//
Query:       MMETSP1325-20131115|829_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00018   21.0   0.2    0.00028   20.3   0.1    1.3  1  PF00013.24 KH domain


Domain annotation for each model (and alignments):
>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.1   2.1e-08   0.00028       9      58 .]      51      98 ..      49      98 .. 0.93

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 2.1e-08
                CCCHHH---TTHHHHHHHHHHT-EEEE--SE.EEEEEESHHHHHHHHHHH CS
  PF00013.24  9 skigriIGkgGsnIkeIeeetgakIdvpkdrdtvtisGdpesvekAkkli 58
                + igri G  G++  +Ie+ t ++I + + +  +++ G+ ++++ A+++i
   MMETSP1325-20131115|829_1 51 RAIGRIAGQDGKTRFAIENATRTRIVLAE-T-RIHVLGSYQNIALARNAI 98
                78*************************87.5.9*************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 544.63
//
Query:       MMETSP1325-20131115|830_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.69
# Mc/sec: 632.08
//
Query:       MMETSP1325-20131115|831_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.65
# Mc/sec: 564.07
//
Query:       MMETSP1325-20131115|827_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.8    8.0  39.2        2.2    7.7  27.2    1.1  1  PF13441.1 YMGG-like Gly-zipper


Domain annotation for each model (and alignments):
>> PF13441.1  YMGG-like Gly-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  27.2   0.00016       2.2       4      41 ..       5      42 ..       2      45 .. 0.93

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00016
               XXXXXXXXXXXXXXXXXXXXXX---------------T CS
  PF13441.1  4 vaGAaiGAaaGAaiGaaaGgggkGAaiGAaaGalaGga 41
               v+GA  GA+aGA +Ga+ G+gg+GA +GA+aG+ aG+ 
  MMETSP1325-20131115|827_1  5 VGGADGGAGAGAGAGAIDGAGGAGAGAGAGAGVDAGAG 42
               89*********************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.26u 0.38s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|834_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.46s 00:00:00.86 Elapsed: 00:00:00.61
# Mc/sec: 1096.04
//
Query:       MMETSP1325-20131115|836_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   13.1   0.0      0.051   12.9   0.0    1.1  1  PF04013.7 Putative SAM-dependent RNA methyltransferase


Domain annotation for each model (and alignments):
>> PF04013.7  Putative SAM-dependent RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.8e-06     0.051      17      35 ..      24      42 ..      20      44 .] 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.8e-06
               HHCCT---.---CHHHHHH CS
  PF04013.7 17 fslkdlpGasgrldvlcrc 35
               ++l++l+G+ +rld++c  
  MMETSP1325-20131115|836_1 24 VPLDELGGPWCRLDLMCAV 42
               68***************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        70  (0.00511995); expected 273.4 (0.02)
Passed bias filter:                       68  (0.00497367); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.22u 0.36s 00:00:00.57 Elapsed: 00:00:00.53
# Mc/sec: 198.94
//
Query:       MMETSP1325-20131115|833_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-34  119.6  24.2    1.6e-34  119.3  16.8    1.1  1  PF00487.19 Fatty acid desaturase


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.3  16.8   1.2e-38   1.6e-34      25     256 ..       1     257 [.       1     258 [. 0.89

  Alignments for each domain:
  == domain 1    score: 119.3 bits;  conditional E-value: 1.2e-38
  PF00487.19  25 HealHgalfrsrrlnrvlglllall.lgisslawrrsHlrhHhytgnaekDpdsalr....................rlirlaerrpllklrrllyrlllglllggllfllalerrklrkrrrrkglalllallilalllalagl.llllsglgalllyvvplalaltvlllvnyleHyglet....ednnaardfyenqlltssnsegswvlnllsgnlnyHieHHlfPgvpwyrLpelhprlreelkehgvrynsl 256
                 H+ +H+ +++  +++  +gll++ + +gi    w+rsH++hH + +  e+Dpd++++                    ++   a+ r+l  ++++l++ ++++  ++l+++  l   +    +  k+     + ++++l +++a++ ++ ++ +  ll++vv + +a ++   +  l+H+++et      + ++++++ +ql t++n++++ +l++++ +l+++ieHHl+P++p+++L+++++ ++e++kehgvry++ 
   MMETSP1325-20131115|833_1   1 HDIGHNGVTHVWKTDNTIGLLVGNFlTGIGMGWWKRSHNVHHVVCNSIEHDPDIQHMpifavtpeifgrffstyhqrWIETDAAARFLVSYQHWLFYPIMAFARFNLYAQAWLLLLSDEYVHNKKWEMAASTGFVVWLSALVAYIpVGSWGNWERLLYLVVSHNVAGLLHVQIC-LSHFTMETyhgvPYKGEEDEWFRMQLATTMNIDCPAWLDWFHIGLQFQIEHHLWPRLPRHNLRYASKLVQEFCKEHGVRYYMP 257
                 *************************99999999*******************************************888999999*********************99999999888888888876444444444444445555557777777777877777777766666555.78*********9999999**************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.42s 00:00:00.97 Elapsed: 00:00:00.61
# Mc/sec: 1327.82
//
Query:       MMETSP1325-20131115|835_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-12   46.9   0.0    4.1e-12   45.7   0.0    1.6  1  PF00497.15 Bacterial extracellular solute-binding proteins, family 3


Domain annotation for each model (and alignments):
>> PF00497.15  Bacterial extracellular solute-binding proteins, family 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0     3e-16   4.1e-12      16     222 ..      11     226 ..       8     229 .. 0.73

  Alignments for each domain:
  == domain 1    score: 45.7 bits;  conditional E-value: 3e-16
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxx.xxxxxxx.xxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00497.15  16 dengklsGfdvdlakaiakrlgvklefvev.sfdelipalesgkvDiaiaaisitpeRekkvdFsq.pyftaglvilvrkkdakkissiksladLkgkkvgvqagstaedllkeelkk.....gakvve.ydnleea.laaLaagrvda..vvadspvlaylikknggkklvlvdeplegeeyaiavrkgdse.....Lrkainkalaelkedgtldkiyekw 222
                  ++g+++G + dla a+a rl+++le+v++ +   l +   +gk+Di    i   p+R+++++F+   y +   + lv+ +  ++ + ++++ ++ g +v+v+a s++  +l+ +l       +   ++  d   e+ l++Laag  ++   +a + +  +l+k++++    ++d+++ + + a++v+++d++      +  + ++++e+k++g ++++ e++
   MMETSP1325-20131115|835_1  11 GPGGEPVGVAPDLAAALATRLDLPLELVPYeNPGLLGDDALKGKWDIGL--IGAEPKRAETIAFTAgAYCEIEATYLVPPD--SELRRLDQV-NVRGNRVVVSARSAYGVWLEANLDLaelrpT--ATPgLDLSRELyLEELAAGGEEGrsSLALAGLRPWLLKQQPELGGTILDGQFMSVQQAMGVPRNDDDevqpeVVGLLSEFVEEAKRTGLVEELIERH 226
                 579**************************978777779********877..999**********99789999*******64..345666655.56899*************9996653544322..2222444455536668888444411344444455777888888877778888888888888888865111114456777777777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.60
# Mc/sec: 1074.37
//
Query:       MMETSP1325-20131115|837_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.70
# Mc/sec: 455.31
//
Query:       MMETSP1325-20131115|841_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       520  (0.0380339); expected 273.4 (0.02)
Passed bias filter:                      431  (0.0315243); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 1061.24
//
Query:       MMETSP1325-20131115|844_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.2    8.3   6.3        2.5    8.1   4.4    1.0  1  PF13300.1 Domain of unknown function (DUF4078)


Domain annotation for each model (and alignments):
>> PF13300.1  Domain of unknown function (DUF4078)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.4   0.00018       2.5      46      82 ..       4      41 ..       1      42 [. 0.82

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00018
  PF13300.1 46 kkqmeeLekaree.Teeerkereekkekrkkaleerrk 82
                 ++e+Lek+r++  ++  +e +e+k+ rk+ +e+rr+
  MMETSP1325-20131115|844_1  4 DDEIERLEKLRAAlRQHACEEIKERKKTRKALIEKRRS 41
               67999******9944556678999999********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1026  (0.0750439); expected 273.4 (0.02)
Passed bias filter:                      778  (0.0569046); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.47s 00:00:00.80 Elapsed: 00:00:00.67
# Mc/sec: 153.80
//
Query:       MMETSP1325-20131115|840_1  [L=379]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.39s 00:00:01.05 Elapsed: 00:00:00.87
# Mc/sec: 1043.93
//
Query:       MMETSP1325-20131115|842_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.1   0.0      0.066   12.2   0.0    1.4  1  PF07092.7 Protein of unknown function (DUF1356)


Domain annotation for each model (and alignments):
>> PF07092.7  Protein of unknown function (DUF1356)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.8e-06     0.066      81     147 ..      49     118 ..      37     130 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.8e-06
  PF07092.7  81 svllCLlvsgLvvFFLFPrsvlvedvgvksvkvafdednslvll...nitstlnitnnnfypvevtsltv 147
                  + C +v gL++FFL Pr   v+++ +     a d    l  +   + +   ++ n n+y+ve ++l +
  MMETSP1325-20131115|842_1  49 GCCCCAIVLGLLLFFLIPREPSVNYQYLAYNGPAPDGSGALTNVsasDFVGRYKFENMNYYSVEWSKLNM 118
                457899*************999999988888887777765554411145566799999999999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 1046.10
//
Query:       MMETSP1325-20131115|845_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-57  194.1   0.1    1.5e-57  193.8   0.1    1.1  1  PF00227.21 Proteasome subunit
    8.3e-15   53.6   0.1    1.4e-14   52.9   0.1    1.4  1  PF10584.4  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.8   0.1   2.2e-61   1.5e-57       1     189 [.      28     214 ..      28     215 .. 0.97

  Alignments for each domain:
  == domain 1    score: 193.8 bits;  conditional E-value: 2.2e-61
                 HHC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEE CS
  PF00227.21   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknvevav 189
                 +++++t+vGi + dg+vla +k+ +  s l+ +++ eK++k+ddh++ ++aGl+aDa++l++ ar + q+y ++y++p++ve+lv+r+++++qaytq++g rpfgv++l+ag+de+   qly+ dpsG+++++k a++iG +++a k+ll+++y+e  t+ +a++la k+l+++++  + + ++ve+ v
   MMETSP1325-20131115|845_1  28 INNAGTAVGILAADGIVLAGEKQKS-TSLLQPSKSSEKMYKLDDHVVTVVAGLTADANILINNARLQSQRYLYTYQEPMPVEQLVQRVCNYKQAYTQYGGLRPFGVAFLFAGWDEHHNYQLYMSDPSGNYSGWK-ATCIGQNNQAGKGLLKNEYEETATVSDALKLAAKVLQKTMDATSATAEKVEFMV 214
                 5899******************888.6888777889*************************************************************************************************8.*****99*******************************************9977 PP

>> PF10584.4  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.1   2.1e-18   1.4e-14       1      23 []       5      27 ..       5      27 .. 0.99

  Alignments for each domain:
  == domain 1    score: 52.9 bits;  conditional E-value: 2.1e-18
               T---TT--------HHHHHHHHH CS
  PF10584.4  1 YDrslTtFSPdGRLfQVEYAlkA 23
               YD+s+TtFSP+GRL+QVEYA++A
  MMETSP1325-20131115|845_1  5 YDSSTTTFSPEGRLHQVEYAIEA 27
               **********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       688  (0.0503218); expected 273.4 (0.02)
Passed bias filter:                      494  (0.0361322); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.46s 00:00:01.01 Elapsed: 00:00:00.67
# Mc/sec: 890.59
//
Query:       MMETSP1325-20131115|848_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-09   36.0   0.0    4.3e-09   35.7   0.0    1.2  1  PF10417.4 C-terminal domain of 1-Cys peroxiredoxin


Domain annotation for each model (and alignments):
>> PF10417.4  C-terminal domain of 1-Cys peroxiredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   3.2e-13   4.3e-09       1      38 [.      16      53 ..      16      55 .. 0.95

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 3.2e-13
               HHH---TSS-B--TTT.T----BE---SSHHHHHHHHH CS
  PF10417.4  1 ALQladkhgvatPAnWkPGdkvivpPppteeeavkryl 38
               +LQl+ +h+v tPAnW  G++ ++ P ++  ea++r+ 
  MMETSP1325-20131115|848_1 16 SLQLTREHPVCTPANWMTGEDIFIKPEVSLNEASERFV 53
               7***********************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.62
# Mc/sec: 270.56
//
Query:       MMETSP1325-20131115|847_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.24s 00:00:00.51 Elapsed: 00:00:00.52
# Mc/sec: 202.77
//
Query:       MMETSP1325-20131115|849_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.81
# Mc/sec: 541.40
//
Query:       MMETSP1325-20131115|843_1  [L=476]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00072   18.6   0.2    0.00072   18.6   0.1    2.3  3  PF13202.1  EF hand
     0.0056   15.7   0.1      0.015   14.4   0.1    1.6  1  PF00036.27 EF hand
  ------ inclusion threshold ------
      0.074   12.8   0.3       0.24   11.2   0.2    1.8  1  PF13405.1  EF-hand domain


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   1.6e-07   0.00072       4      22 ..     126     144 ..     123     148 .. 0.88
   2 ?   -2.6   0.0      0.82   3.8e+03      18      24 ..     344     350 ..     344     351 .. 0.84
   3 ?   -1.4   0.0      0.34   1.5e+03      10      17 ..     392     399 ..     392     399 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 1.6e-07
                HHHHH--S----B-HHHHH CS
  PF13202.1   4 tFrafDlNgDGkIsreELk 22 
                + + +DlNgDGk+++++Lk
  MMETSP1325-20131115|843_1 126 VINLLDLNGDGKLDHDDLK 144
                66899************97 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.82
                HHHHHHH CS
  PF13202.1  18 reELkrl 24 
                +eEL++l
  MMETSP1325-20131115|843_1 344 KEELRNL 350
                79***98 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.34
                -S----B- CS
  PF13202.1  10 lNgDGkIs 17 
                +N DG+++
  MMETSP1325-20131115|843_1 392 FNSDGTLT 399
                599***96 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   3.3e-06     0.015       4      23 ..     125     144 ..     124     147 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 3.3e-06
                 HHHHHHCTTTSSEBEHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfk 23 
                 ++++++D +gdGk++ +++k
   MMETSP1325-20131115|843_1 125 DVINLLDLNGDGKLDHDDLK 144
                 6799**************98 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   5.2e-05      0.24       7      23 ..     128     144 ..     124     149 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.2e-05
                GCC-------B---HHH CS
  PF13405.1   7 klfDkdgdGkidaeELr 23 
                +l+D +gdGk+d ++L+
  MMETSP1325-20131115|843_1 128 NLLDLNGDGKLDHDDLK 144
                89*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.35s 00:00:01.16 Elapsed: 00:00:01.71
# Mc/sec: 667.06
//
Query:       MMETSP1325-20131115|850_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       476  (0.0348157); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.59
# Mc/sec: 333.05
//
Query:       MMETSP1325-20131115|846_1  [L=838]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   6.5e-227  754.9  33.9   1.5e-226  753.7  23.5    1.5  1  PF03030.11 Inorganic H+ pyrophosphatase


Domain annotation for each model (and alignments):
>> PF03030.11  Inorganic H+ pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  753.7  23.5  1.1e-230  1.5e-226       2     681 ..      27     765 ..      26     766 .. 0.95

  Alignments for each domain:
  == domain 1    score: 753.7 bits;  conditional E-value: 1.1e-230
  PF03030.11   2 llallfalvllskvlkqeegt....ekmkeiakaikeGaeaflkrqykviailvvvlavllllllkveke....lsvltaiafllGallSalagyiGmkvavranvrtaeaa.......rekslkkalkvafrsGavmgllvvglallgiallllllkalvkklklekvlellvgfglGaslvalfarvgGGiyTKaADvGaDLvGKveagipeDdprnpaviADnvGDnvGDvaGmgaDlfesyaasiiaalvlgaalleekeesealvllpllvaavgilvsiigvllvrtkeka......klenllkalkkgllvsavlaivallllvkllleasaaekekaalklflavliGlvagllivllteyyTsteykpvkeiaeasetGaatniiaGlavglestvlpvlviavailvsyalalkskvglygiaiaavgmLstagiilavdayGPiaDnAgGiaems.eleeevreitdkLDavGnttkAitkGfaigsAaLaalaLfaayleev.........slksktkiakvdllnpevlvglllGamlvflfsaltlkaVgkaAeevveevrrqfkeipgil.....................................................egkekpdykkcveistkaalkemilpgllavlapivvglllgaealagllagaivtGvllAifmanaGGaWDnAKKyiEagelggkgseaHkaaVvGDtVGDPfkDtagpslniliklmsivslvi 681
                 ++al+f lv+++++ k ++g+     k+++++k+ik+Ga+afl ++yk++  +v++l ++ll++ + +      ++v t + f++Ga+lSa ag++Gm va+  nvrt+ a          + l k+l+vaf++G++mg++vvgl+l+g++l++++l + ++    e+++++++gfg+Gas++alfarv+GGiyTKaADvGaDLvGK eagi eDdp npaviADnvGDnvGDvaGmgaDlfesy++siiaa++lga+l +++      +llp++++a gi++s+ig++ v+t+e+       ++  l+ al+kg++++ +l + a++ ++ +l           ++k f +v+iGlvag++i+++tey+Ts ++ pv++i++  +tGaat++i+Gl vg+ s+v p+++i++ail++ al        yg+aiaavgmL+t+gi+la+dayGP+aDnAgG aem   ++++vr++td LDa+Gntt+A++kGfaigsA+L++l+L+aa+  ++         ++++ +++  +d+ +p +l g+++Gaml+++f+alt+ +VgkaA e+++evrrq+ +                                                          +++  p+++kcv+ist+++++emi+pg+ a+lap++vg+l+g+++l+gll gai++G+++Ai+m+naGGaWDn+KKy E  +lg k++++ ka++vGDtVGDPfkDt+gpslniliklms+vsl i
   MMETSP1325-20131115|846_1  27   765
                 789999999999999988876555589****************************999888777544433455599***********************************9666655544569*********************************88776...57999***************************************************************************************888777.....589**********************99888888878888999***********************98..........899**************************************************************************.....89************************************8789********************************************99****99987777788999*********************************************9977655999************************************************9888889**************************************************************************..78****************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (838 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       678  (0.0495904); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.33u 0.41s 00:00:01.74 Elapsed: 00:00:00.99
# Mc/sec: 2028.43
//
Query:       MMETSP1325-20131115|854_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 243.27
//
Query:       MMETSP1325-20131115|852_1  [L=353]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-36  126.0   0.0    1.5e-36  125.6   0.0    1.1  1  PF02816.13 Alpha-kinase family
  ------ inclusion threshold ------
      0.053   13.6   0.0       0.11   12.6   0.0    1.4  1  PF02927.9  N-terminal ig-like domain of cellulase


Domain annotation for each model (and alignments):
>> PF02816.13  Alpha-kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.6   0.0   2.3e-40   1.5e-36       1     189 []     127     314 ..     127     314 .. 0.93

  Alignments for each domain:
  == domain 1    score: 125.6 bits;  conditional E-value: 2.3e-40
                 SB----EEEEEEEE-HHHT----EEEEEEE-----T--HHHHHHHHHHHHHHHH---HHHHT.....--SS--EE---E.EEEETTS--.....--EEEEEEE---------B-----B-S--SHH.....HHHHHHHHHHTTTS-EEE--B--TT....EEBS-EEE-----------------HHHHHH----HHH CS
  PF02816.13   1 faeGalrkafrvkdldeneesgskyVaKvykkkaklaeeelyfeevksqliakelakkFnkelqeeenkkkkieflpsllvyelenksk.....ekklilvEpflkgefkKynsnsgkvetkrrseveelaqaFShFtYeesggqllvvdlqgvgd....iltDpqihtkdgkgfgtgnlgeegiekFleqhkcneic 189
                 faeG +  a++ k++  + ++g+++V+K+ k+++++   +++ +++++  ia+++ak+Fn+    e + + ++ef ++++++++e++sk      +++i++E f+ g+f+K+ +n+g         ++  +++F hFtY++s+g+ll+vd+qgv +     ltDp+ h+k++  +g+ + g +gi +F+ +h+c+ ic
   MMETSP1325-20131115|852_1 127 FAEGEHCRAYKGKYV-GGPKNGKPCVVKRLKRQSESRPPSQFLRDIEIAEIAQNMAKEFNAL--PEVKAGRTVEF-TIPVLLQVESPSKfgdfsFGDYITAEDFFPGHFEKFVNNAGLL------LYSGTLSSFCHFTYHKSKGNLLIVDIQGVMTagsyRLTDPSLHSKKQCQYGDLDHGLSGIWNFFATHECTGIC 314
                 89*************.*****************999999*********************99..46888888985.55669999***9999**99**********************88......344567************************767889***********999*********************99 PP

>> PF02927.9  N-terminal ig-like domain of cellulase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.6e-05      0.11      40      84 ..     234     280 ..     228     286 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.6e-05
                XXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXX CS
  PF02927.9  40 vvdaagqvvltgtlkvagadad..sgenvhiidFSdlktpGtYtlkv 84 
                 v++ag   ++gtl+++++ +   s+ n  i+d+  + t+G+Y+l+ 
  MMETSP1325-20131115|852_1 234 FVNNAGLLLYSGTLSSFCHFTYhkSKGNLLIVDIQGVMTAGSYRLTD 280
                578899999********7766555*********************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.41s 00:00:01.04 Elapsed: 00:00:00.78
# Mc/sec: 1084.51
//
Query:       MMETSP1325-20131115|856_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-23   82.5   0.0    2.8e-23   82.4   0.0    1.0  1  PF01370.16 NAD dependent epimerase/dehydratase family
      3e-06   26.2   0.0      3e-06   26.2   0.0    1.1  1  PF07993.7  Male sterility protein
    1.3e-05   24.1   0.0    0.00015   20.6   0.0    1.9  1  PF02719.10 Polysaccharide biosynthesis protein
    3.9e-05   22.3   0.0    4.4e-05   22.2   0.0    1.0  1  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.0   8.1e-27   2.8e-23      69     188 ..       3     133 ..       1     137 [] 0.90

  Alignments for each domain:
  == domain 1    score: 82.4 bits;  conditional E-value: 8.1e-27
                 EEE--S---HHHCCCSHHHHHHHHT---HHHHHHHHHHTT.EEEEEEEGGG---BSSSCB-TTS--..--SSHHHHHHHHHHHHHHHHHHHH...T-EEEEEEESEEE-TT..........-SHHCHHHHHH CS
  PF01370.16  69 VihlAaesgvdassedpadfieanvegtlnlleaarkagvkrflfasSsevygkdaeqpikEetpl..gplspYaaaKlageklveayaeey...glnaiilrlfnvyGpr.......nfdeevshvipali 188
                  +hlAa ++v++s + p d++++nv gtl+ll+++++++++ f+f+sS++vyg   + p++Ee+++  g +spY+ +K+ +e+++++++++    ++ ++ilr+fn +G++       ++++ +++++p+++
   MMETSP1325-20131115|856_1   3 CFHLAALKAVGESCQLPLDYYDNNVGGTLRLLRVLHRHHCRCFIFSSSATVYGTA-PAPVTEESLVgiGISSPYGKSKHFVEEILRDFNHSKmgkEWAIMILRYFNPVGAHesgtigeDPSGVPNNLMPYVL 133
                 59****************************************************9.9999******9*********************9985445899*************888766666666666666665 PP

>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   8.9e-10     3e-06      92     200 ..       4     110 ..       1     136 [. 0.76

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 8.9e-10
  PF07993.7  92 ihsAAtvnfeepyke...llrtNvlGtrevlelakklkklvllhvSTavvageregeveekvyeeeederaklkglpntYtqsKalaEklvreasrr...sglpvviiRpsiivg 200
                +h+AA   + e+ +    +++ Nv Gt ++l+  ++++++++++ S+a+v+g+    v        ++e   + g++  Y +sK+  E+++r   ++   ++  ++i+R  + vg
  MMETSP1325-20131115|856_1   4 FHLAALKAVGESCQLpldYYDNNVGGTLRLLRVLHRHHCRCFIFSSSATVYGTAPAPV--------TEESLVGIGISSPYGKSKHFVEEILRDFNHSkmgKEWAIMILRYFNPVG 110
                6777777777666533338899*********************************865........77888999*****************987743111344467777655555 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   4.4e-08   0.00015      80     174 ..       2     111 ..       1     117 [. 0.79

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 4.4e-08
  PF02719.10  80 vvfhaAAlKhVPlveenpleavktNvlgtenvieaaieagvekvvliStDK....AvnPt...........nvmGatKrlaekllqalaeeseekktkfvvvRfGNVlgS 174
                 ++fh AAlK V    + pl+  ++Nv gt  ++++ ++++ + +++ S+      A  P+           + +G +K + e +l  +++++  k+ ++++ R+ N +g+
   MMETSP1325-20131115|856_1   2 ACFHLAALKAVGESCQLPLDYYDNNVGGTLRLLRVLHRHHCRCFIFSSSATvygtAPAPVteeslvgigisSPYGKSKHFVEEILRDFNHSKMGKEWAIMILRYFNPVGA 111
                 58********************************************9975412114444322222222222458999************999999999*****9998876 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   1.3e-08   4.4e-05      70     166 ..       3      95 ..       1     106 [. 0.86

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 1.3e-08
  PF01073.14  70 vihtaaiidvlg.kaerdeilkvnvkGTqnvleacvkagvrvlvYtSsaevvgpnvkgqeilnGdEetpyesthkdaYaesKalAEklvlkangrtlk 166
                  +h+aa+  v    + +  +++ nv GT  +l    ++  r ++++Ssa v g      +++   Ee       +++Y +sK+  E++    n +++ 
   MMETSP1325-20131115|856_1   3 CFHLAALKAVGEsCQLPLDYYDNNVGGTLRLLRVLHRHHCRCFIFSSSATVYGT--APAPVT---EESLVGIGISSPYGKSKHFVEEILRDFNHSKMG 95 
                 5899999999875334455999*****************************999..777777...99999999***************9999997764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 643.73
//
Query:       MMETSP1325-20131115|857_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0022   17.7   1.6     0.0073   16.0   1.0    1.9  1  PF10756.4  Protein of unknown function (DUF2581)
  ------ inclusion threshold ------
        0.1   11.1   0.0       0.11   11.0   0.0    1.2  1  PF02335.10 Cytochrome c552


Domain annotation for each model (and alignments):
>> PF10756.4  Protein of unknown function (DUF2581)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.0   1.1e-06    0.0073      34      70 ..      90     139 ..      41     141 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.1e-06
  PF10756.4  34 rgrrl.............arldlrdgelvplpavqlgddpelvaaalrrl 70 
                + r++             ++++l+ +e++++pa+ +++ pe++aa ++++
  MMETSP1325-20131115|857_1  90 HERTWaseixvgvaaacnVEARLPKEEELIVPARAKATAPEAAAARVAVA 139
                556667777778888888***************************99875 PP

>> PF02335.10  Cytochrome c552
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.6e-05      0.11      66      96 ..      44      74 ..      34     120 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.6e-05
                HHHHHSTT----SS-----GGGGTTT-THHH CS
  PF02335.10 66 eDqletlrtgapveegkqpaaCltCkspdvp 96
                eD le lr  a+   +  +a+C+ C+sp + 
   MMETSP1325-20131115|857_1 44 EDDLEDLRDSASALAAARAASCWRCHSPAMT 74
                577777777776668999**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 748.86
//
Query:       MMETSP1325-20131115|858_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-11   42.6   0.0    7.1e-11   41.7   0.0    1.5  1  PF10431.4 C-terminal, D2-small domain, of ClpB protein
    1.1e-09   38.3   0.0    4.3e-09   36.3   0.0    1.8  2  PF07724.9 AAA domain (Cdc48 subfamily)


Domain annotation for each model (and alignments):
>> PF10431.4  C-terminal, D2-small domain, of ClpB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0     1e-14   7.1e-11       1      68 [.      99     170 ..      99     181 .. 0.89

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 1e-14
                --HHHHHHHHHH...HHHHHHHHHHT.TT-EEEE-HHHHHHHHC----TT---TTHHHHHHHHTHHHHHHHH CS
  PF10431.4   1 LskeelkkIvdl...qlkklekrlae.rgveleltdealdalaekgydpeyGARpLrriiereiedplaeli 68 
                L+ ++++ ++++   ++ k++k l +  +v++++td+al+++a+ +  +++GAR+Lr+i+e+ + + ++ ++
  MMETSP1325-20131115|858_1  99 LDLDQMVMVLTQpknAVIKQYKYLFAmSDVDFHITDDALEEIANIALAKQTGARGLRSILENMLMETMFVVP 170
                66778888888888899*******88799************************************9998765 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   6.3e-13   4.3e-09     104     170 ..       7      92 ..       7      93 .. 0.89
   2 ?   -0.9   0.0      0.18   1.2e+03       2      30 ..     139     173 ..     138     192 .. 0.64

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 6.3e-13
                ---EE-----.--EE-TT--EEEE------TTGGGTS-S..................TTTTSGGG--HHHHHH----TTT-----E CS
  PF07724.9 104 eggtltdkqg.rkvdtknilfImtgafgsskisdesrsk..................eeeeekkkeevedllkkglipEllgRlpe 170
                egg+ ++  +  +++t+nilfI++gaf++ + + ++r                     + +     e++dl+++glipE++gR+p 
  MMETSP1325-20131115|858_1   7 EGGRKNPRGDfIQINTQNILFICGGAFAGMEHIINQRVAkssmgfeanmkinlkdaeVQGSYFDMAEPNDLVTYGLIPEFIGRFPL 92 
                6677777777889***************999999888889************998876777788899*****************96 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.18
                ----EEEE-------HH...HHHHHHHHTT-..... CS
  PF07724.9   2 piisilllgptgvGkte...lakalaellfv....k 30 
                +i++i l+++tg    +   l+++l+e++fv     
  MMETSP1325-20131115|858_1 139 EIANIALAKQTGAR-GLrsiLENMLMETMFVvpneA 173
                57788888888642.223457778888777654432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.30s 00:00:00.79 Elapsed: 00:00:00.76
# Mc/sec: 753.59
//
Query:       MMETSP1325-20131115|859_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.083   12.4   0.2      0.081   12.4   0.1    1.1  1  PF06297.9 PET Domain


Domain annotation for each model (and alignments):
>> PF06297.9  PET Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   5.9e-06     0.081      37      81 ..      20      64 ..       1      73 [. 0.84

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.9e-06
  PF06297.9 37 mellPeekvPvvgseGekyrkrqllkQLPkhDqdvekckelseee 81
               ++l P+ ++P  +++G+   krql++Q   + +++++ k l +++
  MMETSP1325-20131115|859_1 20 IKLFPDIHKPRRQAQGDLAFKRQLQQQNDRKEEKLRERKVLRDDH 64
               6899***********************999999999888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       660  (0.0482738); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:01.01
# Mc/sec: 177.95
//
Query:       MMETSP1325-20131115|851_1  [L=588]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-07   31.3   0.1    0.00074   19.1   0.1    2.4  2  PF02146.12 Sir2 family
      2e-05   24.1   0.0    3.4e-05   23.3   0.0    1.4  1  PF03366.11 YEATS family
  ------ inclusion threshold ------
       0.02   14.5   0.0        3.6    7.2   0.0    2.3  2  PF00205.17 Thiamine pyrophosphate enzyme, central domain


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   1.6e-07   0.00074      59     106 ..     299     348 ..     288     354 .. 0.90
   2 !    9.7   0.0   0.00012      0.56     146     177 ..     355     387 ..     351     389 .. 0.86

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 1.6e-07
                 ..S---HHHHHHHHHHH---EEEEEE--SS-HHHH----..SEEE----T CS
  PF02146.12  59 aeakpnaaHkflkklekkgkllrliTQNidnLekkaGsk..kvvelHGsl 106
                 ++ +p+ +H++l +l + g+ +  + QN d+L +kaG    k+ e+HGs 
   MMETSP1325-20131115|851_1 299 THCAPTFTHHALGHLGRVGMIHGWVQQNHDGLPQKAGYPqeKLNEVHGSW 348
                 4789*********************************9778*******97 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00012
                 S--B-----.HHHHHHHHHHHH-SEEEE----S CS
  PF02146.12 146 vvfFGealp.eklkkllekveeadlllviGtSl 177
                 vv +G +l+ +++  +++++++adl++v+GtSl
   MMETSP1325-20131115|851_1 355 VVKYGGSLHdRAYPWMVDDARTADLVIVLGTSL 387
                 8899****9566666777**************8 PP

>> PF03366.11  YEATS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   7.5e-09   3.4e-05       3      64 ..      20      81 ..      18     107 .. 0.80

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 7.5e-09
  PF03366.11  3 kwtvfvrgldsedlskfikkVtFkLhetfanpvrvvkkp.....PfevtetGWgeFeiqikiqfkee 64
                +w + v +      + ++ +V+  Lh+tf+++++ + ++      fe+t+ GWg+F + +++++k+ 
   MMETSP1325-20131115|851_1 20 RWCLHVTSS-----EPVVASVVASLHPTFTPSQVALADEthsgeHFELTRIGWGTFVVGLRVHLKDG 81
                555555444.....45899************98877766567779*******************985 PP

>> PF00205.17  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0036        16       1      29 [.     255     283 ..     255     303 .. 0.87
   2 ?    7.2   0.0    0.0008       3.6      72     130 ..     371     433 ..     312     441 .. 0.70

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0036
                 HHHHHHHHHH-SSEEEEE-CHHCHTTGHH CS
  PF00205.17   1 ideaaellkaakrPvilvGggvrrseake 29 
                 ++e+a+l++a+ + v+++G+g++ s   +
   MMETSP1325-20131115|851_1 255 VRELAKLMQASTKTVLYTGAGISASVVGQ 283
                 789*******************9875555 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0008
                 HHHHHH-SEEEEES--SSTTTT--..CTC.TTTCC..EEEEEESSCEECTTCE..SEEEESSH CS
  PF00205.17  72 neaieeaDlvlvlGarlsdvrttg..psa.kfppaa.kiihvdidpaeigknypvdvavvgdi 130
                  +  + aDlv+vlG+ l   +  +  ++a +++ ++ ++ +v i+ ++  +  ++++ ++g  
   MMETSP1325-20131115|851_1 371 VDDARTADLVIVLGTSLGGLNADQvaTDAaERSCHGeALGSVMINLQQTPQDGKMTLRLFGKS 433
                 445678*********998877766654444666565566666666666555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.90u 0.33s 00:00:01.23 Elapsed: 00:00:00.85
# Mc/sec: 1657.72
//
Query:       MMETSP1325-20131115|862_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   14.6   1.9      0.019   14.3   1.3    1.1  1  PF03087.9 Arabidopsis protein of unknown function
        1.3    8.6   6.3        1.7    8.3   4.4    1.1  1  PF11845.3 Protein of unknown function (DUF3365)


Domain annotation for each model (and alignments):
>> PF03087.9  Arabidopsis protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.3   2.8e-06     0.019     105     216 ..      30     141 ..      13     142 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.8e-06
  PF03087.9 105 tktk.vvnnnedqesasavvdvleetvsvtvsvlrsvlsfLstktkkskkikssllsekkvkkgeesssqsirselerldeekkrdeeeekkilkeleelensieelEeeles 216
                ++++  + ++++ e++ ++ ++ +e++   +   r v   ++t t +s++  + +++ ++   +        r+e   + ++kk+  +e+k++ k l + + ++ee+Eeele+
  MMETSP1325-20131115|862_1  30 MEAQqRWHVEQQREQEAEQQALRNEQMGGLTHQARPVAAQVRTYTAASFDDHITGWLAQRLPTEP-PATPRSRKEKDAIKQKKKKRALEAKNAIKTLDAEKLRLEEMEEELEE 141
                333337999999999999999999999999999**********9999999888888888887777.5567799**************************************97 PP

>> PF11845.3  Protein of unknown function (DUF3365)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   4.4   0.00025       1.7      21     122 ..      10     117 ..       7     135 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00025
  PF11845.3  21 leaqaedeakkkaralik.qlestreyvaeaggpivapkegt.......gealallvpayaareigeelskktggytfrqtslkprnpankpda.fEkealekfengpake 122
                le qae +a+++ +++++ q+e+ ++++ e+++ + a+++          ++ a +v a + + +++++++   ++t  ++   p+ p  +p +  Ek+a+++ +++ a e
  MMETSP1325-20131115|862_1  10 LEGQAETQAREERETYARlQMEAQQRWHVEQQREQEAEQQALrneqmggLTHQARPVAAQVRTYTAASFDD---HITGWLAQRLPTEPPATPRSrKEKDAIKQKKKKRALE 117
                6789999****977777615566666999999999766555477777666666666666666666666666...6999999999********999*******999988444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1505  (0.110079); expected 273.4 (0.02)
Passed bias filter:                      565  (0.0413253); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.42s 00:00:00.93 Elapsed: 00:00:00.64
# Mc/sec: 535.44
//
Query:       MMETSP1325-20131115|861_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 1076.10
//
Query:       MMETSP1325-20131115|853_1  [L=811]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-38  130.7   0.0    3.8e-37  127.7   0.0    2.0  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
      1e-10   41.4   0.0    4.5e-10   39.3   0.0    1.8  2  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.086   12.3   0.0      0.086   12.3   0.0    2.9  3  PF07338.8  Protein of unknown function (DUF1471)
        2.5    5.7  11.5        3.7    5.1   8.0    1.1  1  PF04147.7  Nop14-like family


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.7   0.0   1.1e-40   3.8e-37     112     272 .]      18     788 ..      16     788 .. 0.98

  Alignments for each domain:
  == domain 1    score: 127.7 bits;  conditional E-value: 1.1e-40
                 HHHHHHCCHHHHSTTS-....................-SCHHHHC-EEEEEEEEETTCEEE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EEEECCB-SEEEEEEE-EEEETTTTEEEE-----B--SEEE-GGGBSCHHH--BTTSSCEEEEEEEEEE---TT---EEEEEESS-TT-EEEEETTEEEEE-HHHHTTC....EEEEEEE CS
                 xxxxxxxxxxxxxxxxxx..xx..............xxxxxxxxxxxxxxxxxxxxxxxxx.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxx RF
  PF00443.24 112 edlnrlnkkektekqkae..ds..............ndslitdlfkgqlksrlkclecknv.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................kvklkrlPeiLiihlkRfkyseerssnkKlnekvefpleLdlssyvneekkeeseskpkkYeLvavvvHsGslssGHYvayvknneknkWlkfdDetvtevkeeevlke....saYvlfY 272
                 edlnr+++k++te+ +a+  d+              nds + dlf+gq+ks ++c+e + +                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       k+++++ P+iL++h+kRf+ + ++   +Kl++ v+fpleLd+s+yv +        k  +Y+L av +H G++++GHY+ay + n+++kW++fdD+ v+ev +  v+k+    +aYv fY
   MMETSP1325-20131115|853_1  18   788
                 89*************999763378999****************************98666666*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************95......68999************************.******************4..33333456******9 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.25   8.4e+02     112     166 ..      48     107 ..      15     132 .. 0.81
   2 !   39.3   0.0   1.3e-13   4.5e-10     158     295 .]     638     768 ..     616     769 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.25
  PF13423.1 112 erdkseaesslselfgtklisqnrc..iscqaekvkeesllnlelpypp...sekgikle 166
                e +k  ++s   +lfg ++ s+  c    c++ ++   + l ++lp+++   +e++++++
  MMETSP1325-20131115|853_1  48 ETHKKRNDSHVFDLFGGQFKSVVICpeATCKYVSKTFDPYLLVSLPLNKataTEQHFDVS 107
                556667778888999999999999998999999999999999999999977777777765 PP

  == domain 2    score: 39.3 bits;  conditional E-value: 1.3e-13
  PF13423.1 158 psekgiklenileeslnseknke...ikcesckkkssaevakkftslPpiLgIclkrynek..efgakrlntkvdiplelrlphfiqddeqenekplsgefkyeLqavVchigdsltsghlvSlirvaeseksqWylFnDfrv 295
                ++++ ++l+++l+ +  +e+  e   + c  ck+++ a  +  + s PpiL+++ kr +++  +f+  +l+t v++plel++++ + +          + + y+L av  h g  +  gh+ ++ r    ++ +W  F+D+ v
  MMETSP1325-20131115|853_1 638 EKDSTMQLSSCLDLFTVQEQLSEqeaWYCPRCKEHKCAFKKMDIWSAPPILVLHFKRFSVDasSFWTEKLETAVKFPLELDISKYVLNPG--------KVNTYSLAAVSNHFGG-MGGGHYTAYGRN---DNGKWFEFDDSAV 768
                377899*********7777777779999**********************************99**********************8854........3567************.9**********9...5779******765 PP

>> PF07338.8  Protein of unknown function (DUF1471)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.7   1.1         4   1.4e+04      22      32 ..     332     342 ..     321     344 .. 0.64
   2 ?   12.3   0.0   2.5e-05     0.086       7      34 ..     531     557 ..     524     558 .. 0.93
   3 ?   -0.7   0.0       0.3     1e+03      35      53 ..     783     803 ..     782     803 .. 0.90

  Alignments for each domain:
  == domain 1    score: -4.7 bits;  conditional E-value: 4
  PF07338.8  22 aalakkAdakG 32 
                aa a++A+a G
  MMETSP1325-20131115|853_1 332 AAAAAAAEADG 342
                55555555554 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 2.5e-05
  PF07338.8   7 tisvsgafgspsdaeaalakkAdakGAk 34 
                ++sv+g+  +  ++++++ ++A+a+GA 
  MMETSP1325-20131115|853_1 531 VVSVKGS-MTSGEVREMIEQRAKAMGAN 557
                69****9.*******************6 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 0.3
  PF07338.8  35 yYvIisare..nggnwhatAd 53 
                +YvI  +r+   ++ w+a+A+
  MMETSP1325-20131115|853_1 783 AYVIFYIRDdyCPDAWRASAE 803
                799999999999*******96 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   8.0    0.0011       3.7     311     391 ..     169     250 ..     153     278 .. 0.57

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0011
  PF04147.7 311 esaddlddefeedddenfglgsaeeeeeeeeeegvededeeeddddeeeeeedvded.eeeedeedeesddeeeeeeeeeas 391
                ++++d    +e dd+  f+  s +e +    ee+  ++de+e++dd+  e e   e+ +++e+++++++d  e ++++++as
  MMETSP1325-20131115|853_1 169 IQKQDILAAYEVDDNTPFWPTSPTEWQPHPPEEEWGKSDESEEEDDDMPELEAPGEEkKDDEADDEASADAHETKTADASAS 250
                44455555566899999******99999999888888888888777773333322220233333333333333333333311 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       665  (0.0486396); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.35u 0.38s 00:00:01.73 Elapsed: 00:00:01.02
# Mc/sec: 1905.34
//
Query:       MMETSP1325-20131115|864_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-07   29.4   0.0    1.3e-06   28.8   0.0    1.4  1  PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold


Domain annotation for each model (and alignments):
>> PF01408.17  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   9.4e-11   1.3e-06      75     120 .]       9      55 ..       1      55 [. 0.90

  Alignments for each domain:
  == domain 1    score: 28.8 bits;  conditional E-value: 9.4e-11
                 HHHHHHHHHHTT-.EEEEESSS-SSHHHHHHHHHHHHHHT--EEEE- CS
  PF01408.17  75 hadlalaaleagk.hvllEKPlattveeakelvelaekkgkivsvgy 120
                   +l ++++eag+ +v+lEKP attv++++ +++ ae++g+ v++gy
   MMETSP1325-20131115|864_1   9 NPKLLRDVIEAGCtKVMLEKPGATTVADLESMAAFAEERGVDVYMGY 55 
                 66788999*********************************9*9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|865_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-76  257.1   0.0    1.7e-76  256.9   0.0    1.0  1  PF01053.15 Cys/Met metabolism PLP-dependent enzyme
  ------ inclusion threshold ------
      0.056   13.0   0.0      0.099   12.2   0.0    1.4  1  PF10727.4  Rossmann-like domain


Domain annotation for each model (and alignments):
>> PF01053.15  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.9   0.0   2.4e-80   1.7e-76     166     386 .]       4     258 ..       1     258 [. 0.97

  Alignments for each domain:
  == domain 1    score: 256.9 bits;  conditional E-value: 2.4e-80
                 HHHCSS-EEEEE-TTTHHHH--GGG----EEE--TTTTT----S-----EEESE-HHHHHHHHHHH..................................HH---B--HHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTEEEEE-TTSTTSTTHHHHHHHSSGG...EEEEEESS-HHHHHHHHHH-SSSEESS-----S-EEE-CCCTTTTTSHHHHHHH----TTEEEEE-----HHHHHHHHHHHHH CS
  PF01053.15 166 akkkgdvlvvvDntfaspllqrpLelgaDivvhSaTKylnGhsdvvgGvvvvkgkeelakklkflq..................................nalGavlspfdawlllrGlkTLslRverhsenAlklAefLekhpkvekvyYpgLeshpqhelakkqlkgfgg.vlsfelkseeeaakkfldklklfslaeslGgvesLishpatmthasipkeereaagvtddLvRlsvGiEdvdDliadleqale 386
                 a+k g ++++vD tf +p+l++p+++ga i+v S+TK+ +Gh++ vgG+vv++gk+++    + l                                   ++lG+ +sp ++w++l+G++TL  R+e+h++nA ++A fL++hpkve+v++pgL+++p +++ +k++kg+gg ++ f +k+++ea ++f+d+lklfs+ +++G+++sL++hpa++th+++++ee+++agv +++vRlsvGiE++dD+i dl+qale
   MMETSP1325-20131115|865_1   4 AHKLG-LPLIVDDTFTTPALCKPFHHGAGIIVSSLTKWTGGHGTGVGGIVVDSGKFNWGAGKHPLFsepdtsygglrwgldlpemlaplayilrmrtvplRNLGGCISPDNSWMFLQGIETLVGRMEKHCDNAKQVAWFLKSHPKVEWVRFPGLPDDPMYAMQNKYIKGKGGpLVVFGIKGGKEAGQQFIDNLKLFSHVANVGDAKSLAIHPASTTHSQMSPEEQHKAGVPPEMVRLSVGIEHADDIIYDLSQALE 258
                 77886.****************************************************9986644478*******************************************************************************************************9**********************************************************************************96 PP

>> PF10727.4  Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.4e-05     0.099       7      49 ..     235     277 ..     222     284 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.4e-05
  PF10727.4   7 rsarLsvGiisaGrvgvalgealeraghvvvavsaisdasrer 49 
                +  rLsvGi  a     +l++ale++gh+  a   +++  +e 
  MMETSP1325-20131115|865_1 235 EMVRLSVGIEHADDIIYDLSQALETIGHHEAAAPKAEKKEKET 277
                568*************************987766555545554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.59
# Mc/sec: 1173.81
//
Query:       MMETSP1325-20131115|867_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-16   57.8  10.8    4.7e-12   45.8   0.2    3.3  3  PF00415.13 Regulator of chromosome condensation (RCC1) repeat
    3.3e-11   42.3  17.5    4.7e-06   25.9   2.2    3.2  3  PF13540.1  Regulator of chromosome condensation (RCC1) repeat
  ------ inclusion threshold ------
      0.011   15.3   2.0       0.26   10.9   0.2    2.2  2  PF01016.14 Ribosomal L27 protein


Domain annotation for each model (and alignments):
>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.6     0.041   1.9e+02      39      51 .]      41      53 ..      17      53 .. 0.85
   2 !   45.8   0.2     1e-15   4.7e-12       2      51 .]      57     108 ..      56     108 .. 0.96
   3 !   15.7   0.1   2.5e-06     0.011       2      34 ..     112     150 ..     111     153 .. 0.92

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.041
                -EEE-----EEEE CS
  PF00415.13 39 vqvacGgsHtlal 51
                v  a+Gg H+l++
   MMETSP1325-20131115|867_1 41 VECAAGGAHSLVV 53
                6789******986 PP

  == domain 2    score: 45.8 bits;  conditional E-value: 1e-15
                 TEEEEE---------...--------S-EE-GGG------EEE-----EEEE CS
  PF00415.13   2 GrVysWGrndyGqLG..kggseenvlvPvkveglsgvrvvqvacGgsHtlal 51 
                 G V+s+G n++GqLG  + +  +nv  P++++ ++g++vv v++G  H+l+l
   MMETSP1325-20131115|867_1  57 GVVWSFGANTFGQLGlgEAKVGRNVAQPKRIQAFRGYPVVTVSAGEAHSLFL 108
                 89*************9999999***************************986 PP

  == domain 3    score: 15.7 bits;  conditional E-value: 2.5e-06
                 TEEEEE---------.......--------S-EE-GGG- CS
  PF00415.13   2 GrVysWGrndyGqLG......kggseenvlvPvkvegls 34 
                 G V s+G++ +GqLG        g+++++ +P +v ++ 
   MMETSP1325-20131115|867_1 112 GTVQSCGQGGNGQLGvlhrdfACGNNSDRATPARVDLPG 150
                 77889*****************************99886 PP

>> PF13540.1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   2.2     1e-09   4.7e-06       5      30 .]      44      69 ..      44      69 .. 0.98
   2 !   24.5   1.5   2.9e-09   1.3e-05       1      30 []      95     124 ..      95     124 .. 0.98
   3 ?   -0.6   0.1      0.21   9.7e+02      22      28 ..     133     139 ..     132     140 .. 0.81

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 1e-09
               E-----EEEE-.---EEEE---TTST CS
  PF13540.1  5 saGgyHtcaLtsdGaVlcWGsNssGQ 30
               +aGg H++++ ++G V+++G N++GQ
  MMETSP1325-20131115|867_1 44 AAGGAHSLVVSQGGVVWSFGANTFGQ 69
               89***********************9 PP

  == domain 2    score: 24.5 bits;  conditional E-value: 2.9e-09
                --EEE-----EEEE-.---EEEE---TTST CS
  PF13540.1   1 VvsvsaGgyHtcaLtsdGaVlcWGsNssGQ 30 
                Vv vsaG  H+++L   G+V ++G++++GQ
  MMETSP1325-20131115|867_1  95 VVTVSAGEAHSLFLGKTGTVQSCGQGGNGQ 124
                899**************************9 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.21
                EE---TT CS
  PF13540.1  22 cWGsNss 28 
                ++G+Ns+
  MMETSP1325-20131115|867_1 133 ACGNNSD 139
                7999986 PP

>> PF01016.14  Ribosomal L27 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   5.8e-05      0.26       5      50 ..      21      66 ..      18      74 .. 0.93
   2 ?    4.0   0.0    0.0079        36      43      67 ..      91     115 ..      72     124 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 5.8e-05
                -------------------S----------EEEB-----SB----- CS
  PF01016.14  5 agGstkngrdsngkrlGvKkfggefvkaGnIivrQrgtkfhpGenv 50
                + Gs+ n+ d  gk  G+K  +  +  a +++v Q g  +  G n+
   MMETSP1325-20131115|867_1 21 SHGSSGNSNDNVGKAPGAKGVECAAGGAHSLVVSQGGVVWSFGANT 66
                68***************************************99986 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0079
                 -SB----------SBEE-S----EE CS
  PF01016.14  43 kfhpGenvglGkDhTlfAleeGvVk 67 
                 + +p   v  G+ h+lf  ++G+V+
   MMETSP1325-20131115|867_1  91 RGYPVVTVSAGEAHSLFLGKTGTVQ 115
                 55688899***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.78
# Mc/sec: 476.20
//
Query:       MMETSP1325-20131115|866_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.63
# Mc/sec: 1293.27
//
Query:       MMETSP1325-20131115|869_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.64
# Mc/sec: 632.79
//
Query:       MMETSP1325-20131115|871_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 320.80
//
Query:       MMETSP1325-20131115|870_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   12.5   0.2      0.073   12.1   0.2    1.1  1  PF03379.8 CcmB protein


Domain annotation for each model (and alignments):
>> PF03379.8  CcmB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   5.4e-06     0.073      29     102 ..      74     147 ..      65     178 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.4e-06
  PF03379.8  29 vvvlfPlavgpekkllariapgiiwvaallasllsleRlFaedfedGsLellllsktplellvlaKvlahwllt 102
                 +v +P  vgp+++   ri   ++ v  l   ll+l+ l +  + dG    l+  +  le l+l+++l h l  
  MMETSP1325-20131115|870_1  74 SLVSMPRFVGPSTACHKRINHVVLVVKVLCPLLLILDHLQEFSKVDGPAHVLVDLTDHLEQLLLSRLLPHGLQH 147
                5778999***********************************************************99998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.41s 00:00:00.92 Elapsed: 00:00:00.61
# Mc/sec: 781.76
//
Query:       MMETSP1325-20131115|868_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-68  230.5   0.0    3.2e-68  230.0   0.0    1.3  1  PF14388.1 Domain of unknown function (DUF4419)


Domain annotation for each model (and alignments):
>> PF14388.1  Domain of unknown function (DUF4419)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.0   0.0   2.3e-72   3.2e-68       3     298 ..     142     431 ..     140     432 .. 0.89

  Alignments for each domain:
  == domain 1    score: 230.0 bits;  conditional E-value: 2.3e-72
  PF14388.1   3 sfvqaavkAysehlhlvlrPddiWlaIltqlsfyvnanaeelrskfvdhegkkelvve.vdelsegelnsadwe.elieelteeiqknvkdpslrdliipdFsTttevdkvvssillmstvkkyFdYkvvlvCGipsvtLlGtkeDWeklkekiekLkefgee..leewakklepildkfiksfkgkk.edkeFWnkivkfess..gsgesv.lsGWitaffvydkdgkeegkkkneseeekeldkskyekvdteeiPsglvsvpvkvedngkeetklelvaGllgvkvdeekntlkPeigwai 298
                ++ ++a+ A+ +h++l lrPddiW +++ +++++v+ nae+lr+kfv+hegkk+l++e v++++ ge+    we +++  ++++i++++ d++ +  i+  FsTtt++d ++ +i+lms++k+yF++ + ++CG+p ++L+G++eDW +l++k+e+L ++ +    ++w + l+p+ld+f  +++g++  d  FW+++vk+++   gsg+   +sGWi+ f++     k+   k          + +     + e++Ps  +svpv++e +g++ t l++ aG +g+  d+ + +l+P+  w +
  MMETSP1325-20131115|868_1 142 GLYDTALGAFRQHQPLALRPDDIWSTLTYSFAKHVQDNAEKLRHKFVQHEGKKQLKIEtVPSFTMGEEAPEAWEeQIFPLFSQQIRAHIGDDT-HAAIVGGFSTTTPTDVAANEITLMSAMKQYFSFAMNTMCGVPWIRLEGSREDWARLRAKAETLGSLMVPkiGKDWMACLLPVLDQFCLAWEGEQcIDYCFWQNMVKVRQHgmGSGSYEtISGWIQCFYLDLCPFKSW--K----------KLAADIGPRPEDFPSTQSSVPVEWEYHGQK-TMLRFHAGCVGTARDQATGALRPVTLWGV 431
                67789999*************************************************835889999988889963799**************7.888888***********************************************************6655668************************************996644443359*****995433333333..2..........2345567899***************99999.************************99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.41s 00:00:01.27 Elapsed: 00:00:00.59
# Mc/sec: 2063.30
//
Query:       MMETSP1325-20131115|877_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.59
# Mc/sec: 280.25
//
Query:       MMETSP1325-20131115|874_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-12   47.3  11.9    1.2e-12   47.3   8.2    1.5  2  PF01061.19 ABC-2 type transporter
    0.00075   18.4   7.0    0.00093   18.1   4.8    1.1  1  PF12698.2  ABC-2 family transporter protein
     0.0055   16.8   0.2      0.015   15.4   0.0    1.9  2  PF13722.1  C-terminal domain on CstA (DUF4161)


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   8.2   2.6e-16   1.2e-12      73     209 .]      15     153 ..       2     153 .. 0.86
   2 ?   -3.3   0.5      0.82   3.7e+03     102     120 ..     203     221 ..     200     225 .. 0.58

  Alignments for each domain:
  == domain 1    score: 47.3 bits;  conditional E-value: 2.6e-16
  PF01061.19  73 piferergvlerelvsplyslsaivlakvlvelpvsllqaiifll.ivyflvgldls.fflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsmpkwlqwiyylnPltyavealrsnll 209
                   +  e +++ +e+ +++ s+ a++lak ++e+p+++++a+  l   +y l +++ + f+l++l++ + + +  +++ +++  +++    ++  + l +  +l++G++ip d+m + l+ +yy+ Pl+y+v +++ +++
   MMETSP1325-20131115|874_1  15 YAYNAEFNSVRKEIKNGMCSPGAYLLAKSVLEIPLMFFFALCALGpAAYGLANFNGDdFILYVLIWTAAIYAWEAMAEVLALSFQNPLFGMMQFMGLWFSAFLYGGFLIPGDDMVWPLKVFYYILPLKYSVRSMVWAEY 153
                 4556788899***********************************99999**********************9***999999888876655555555566689***********7689****************98875 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 0.82
  PF01061.19 102 lvelpvsllqaiifllivy 120
                  +++++ +++a++f +i+ 
   MMETSP1325-20131115|874_1 203 TGDVMFCICIAVVFKIIYC 221
                 5556666666666655554 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   4.8     2e-07   0.00093     197     338 ..      32     216 ..       3     224 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 2e-07
  PF12698.2 197 sgvspfaywlskilgdllvgliqlllill.lafglegipfgnlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfpleslpsflkwifsiiPffslgdgllriitgd.lse..........................................illsliiLllfavvy 338
                + +sp ay+l+k +  + ++++++l++l+  a+gl++++ ++++l++l++ + + a  a++ +l++ f+++  +++ ++ l+++++++ ++l+p +++  +lk++ +i+P+ + + ++ ++ + +  ++                                          ++ ++++++ +avv+
  MMETSP1325-20131115|874_1  32 M-CSPGAYLLAKSVLEIPLMFFFALCALGpAAYGLANFNGDDFILYVLIWTAAIYAWEAMAEVLALSFQNPLFGMMQFMGLWFSAFLYGGFLIPGDDMVWPLKVFYYILPLKYSVRSMVWAEYHQsEWQkckddaspgtyqsngelcygrdgkdvletlnsifplfssdnqVTGDVMFCICIAVVF 216
                5.7999**********************9779999999999******************************998877777777555555566666778899**************99999854442344777777777777777788888888888888888888888888777777777777776 PP

>> PF13722.1  C-terminal domain on CstA (DUF4161)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2         1   4.7e+03       8       8 ..     106     106 ..      76     132 .. 0.60
   2 !   15.4   0.0   3.4e-06     0.015      73     103 ..     188     218 ..     147     226 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1
  PF13722.1   8 y 8  
                +
  MMETSP1325-20131115|874_1 106 M 106
                2 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 3.4e-06
  PF13722.1  73 gintlWplFGiaNQlLAalaLlvvtvvllkk 103
                + n+++plF++ NQ+ + + ++++++v++k 
  MMETSP1325-20131115|874_1 188 TLNSIFPLFSSDNQVTGDVMFCICIAVVFKI 218
                799************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       547  (0.0400088); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.54
# Mc/sec: 1122.74
//
Query:       MMETSP1325-20131115|878_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   12.6   0.1        0.1   12.0   0.1    1.3  1  PF02974.9 Protease inhibitor Inh


Domain annotation for each model (and alignments):
>> PF02974.9  Protease inhibitor Inh
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   7.4e-06       0.1      13      71 ..      38     100 ..      30     120 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.4e-06
                ---EEEE-----EEEEEEEEE-.--.EEE--HHHHHHH...SSS-----B------EEE---- CS
  PF02974.9  13 aGqWqlskkeqvCeieltatkleeg.slagdaaCleel...LseapsgWrptpdglaltdkeG 71 
                +G W+    ++   ++l++t++++  ++ ++++C +el   L++ p  W  +p+ lal + + 
  MMETSP1325-20131115|878_1  38 SGTWKPALMGKDVVLQLQNTQFKKWtDRVKETDCQAELkrlLTAGPPIWLSDPNALALPEGDT 100
                6888888888888899*****98878999*****76644438888888*********987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.57
# Mc/sec: 656.93
//
Query:       MMETSP1325-20131115|879_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|875_1  [L=405]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-35  120.3   0.0    7.1e-35  119.6   0.0    1.3  1  PF00071.17 Ras family
    1.2e-18   67.5   0.0    1.9e-18   66.9   0.0    1.3  1  PF08477.8  Miro-like protein
    5.3e-07   28.9   0.0    7.5e-07   28.4   0.0    1.2  1  PF00025.16 ADP-ribosylation factor family
    6.4e-06   26.0   0.0    1.1e-05   25.2   0.0    1.4  1  PF01926.18 50S ribosome-binding GTPase
     0.0016   17.7   0.0      0.014   14.7   0.0    2.0  2  PF00009.22 Elongation factor Tu GTP binding domain
     0.0076   16.1   0.1      0.047   13.5   0.1    2.1  1  PF13521.1  AAA domain
     0.0082   16.4   0.0      0.016   15.4   0.0    1.5  1  PF13191.1  AAA ATPase domain
  ------ inclusion threshold ------
      0.017   14.1   0.0      0.022   13.7   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
      0.065   12.1   0.0        0.1   11.5   0.0    1.2  1  PF06745.8  KaiC
      0.093   12.2   0.0       0.16   11.5   0.0    1.4  1  PF11834.3  Domain of unknown function (DUF3354)
       0.12   12.3   0.0        0.4   10.6   0.0    1.9  2  PF13401.1  AAA domain
       0.21   10.2   0.0       0.35    9.5   0.0    1.3  1  PF00493.18 MCM2/3/5 family


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.6   0.0   6.3e-38   7.1e-35       2     158 ..     186     359 ..     185     362 .. 0.90

  Alignments for each domain:
  == domain 1    score: 119.6 bits;  conditional E-value: 6.3e-38
                 EEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHH.HHHHHST..TTSSEEEE---TTGGG...G-SS-HHHHHHHH...........HHTT.EEE---BTTTTTTHHHHHHHHHH CS
  PF00071.17   2 lvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwve.eikrvae..envpivLvGnKvDlee...kravsteegeela...........kelg.lkfletSAktnenveeafeellr 158
                 + ++G  +vGK++l+++f++++F   +++Ti +d y+k++ vd+++ +lei+DTAGq+ef++ r++ +r+ +g + v+++t+r+s+++++ + + +  + ++   + p++LvG K Dl e   +r+vs +e+e+              +lg + ++etS kt enve+afe+++r
   MMETSP1325-20131115|875_1 186 VAILGTPGVGKSALTHHFIHGSFVAYHDPTI-EDAYRKTVFVDNRQDNLEILDTAGQDEFTQYRHQWMRHKDGYIFVFSLTNRQSLHELDAYAQlHYMENCNkpVTPPVLLVGSKRDLVEngeNRQVSVAEAEQSLsrwrdmfrhseVRLGpFIYMETSSKTGENVERAFENIVR 359
                 579****************************.*********************************************************9887634555666554579**********988889********9987788888888665566799*******************98 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   1.7e-21   1.9e-18       2     119 .]     186     301 ..     185     301 .. 0.90

  Alignments for each domain:
  == domain 1    score: 66.9 bits;  conditional E-value: 1.7e-21
  PF08477.8   2 vvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk..ipvilvgnklD 119
                v+++G +gvGKs+l + ++ ++f+      ++++d +  kt++vd+ ++ le+ d++g++e+ +  ++ ++  d++++v++lt+++sl+e++++ a+l  +++ +k    pv lvg+k+D
  MMETSP1325-20131115|875_1 186 VAILGTPGVGKSALTHHFIHGSFV--AYHDPTIEDAYR-KTVFVDNRQDNLEILDTAGQDEFTQYRHQWMRHKDGYIFVFSLTNRQSLHELDAY-AQLHYMENCNKPvtPPVLLVGSKRD 301
                79**********************..555555555555.8************************88888************************9.99*9999998875479*******98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   6.6e-10   7.5e-07      15     147 ..     184     322 ..     174     360 .. 0.79

  Alignments for each domain:
  == domain 1    score: 28.4 bits;  conditional E-value: 6.6e-10
                 EEEEEE--TT---HHHHHHHHHS-EEE.E-S--S-EEEE.EEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHH..HHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST. CS
  PF00025.16  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfnvee.lei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRlee..akeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkg 147
                 l + +lG  + GK+ + +++ ++++v  + PTi    ++ + +  ++ ++++ D  Gq++  ++ ++++++ d+ ifv   ++r+ l+e  a ++L+ + + ++  + ++l+++ K Dl e  ++++++ + + ++l+ 
   MMETSP1325-20131115|875_1 184 LYVAILGTPGVGKSALTHHFIHGSFVAyHDPTIEDAYRKtVFVdnRQDNLEILDTAGQDEFTQYRHQWMRHKDGYIFVFSLTNRQSLHEldAYAQLHYMENCNKPVTPPVLLVGSKRDLVENGENRQVSVAEAEQSLSR 322
                 557799****************99987689***9776542444326778**************************************98335689********999****************99999999888888762 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   9.8e-09   1.1e-05       2      90 ..     186     271 ..     185     299 .. 0.70

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 9.8e-09
                 EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE...ETTE..EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTS....H CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev...kkek..iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasa....v 90 
                 vai+G p vGKS+L    ++   + v+ +  t +d ++++v   +  +  ++++Dt+G           +++++y ++  ++ d+ ++v+++++    +
   MMETSP1325-20131115|875_1 186 VAILGTPGVGKSALTHHFIHG--SFVAYHDPTIEDAYRKTVfvdN-RQdnLEILDTAGQ----------DEFTQYRHQWmRHKDGYIFVFSLTNrqslH 271
                 89*****************75..5799999999999666666642.225578******2..........2567787777799********955423221 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.12   1.4e+02       5      32 ..     185     212 ..     181     234 .. 0.67
   2 !   14.7   0.0   1.2e-05     0.014      66     184 ..     227     359 ..     213     363 .. 0.71

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.12
                 EEEEEESTT---HHHHHHHHHHCCCCEH CS
  PF00009.22   5 nigiighvDhGKtTltdallykagaisk 32 
                  ++i+g    GK+ lt + ++ +    +
   MMETSP1325-20131115|875_1 185 YVAILGTPGVGKSALTHHFIHGSFVAYH 212
                 68999999**********9987654444 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 1.2e-05
                 .ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-...S-HHHHHHHHHHHHTT--....EEEEEE-TTST..CHHHHHHHHHHHHHH......HHHCTTGCT....CGEEEEEE-STCCHHHHHHHHHHHH CS
  PF00009.22  66 etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG...vepqTeevlrlakklgvk....iivviNKiDrv..eaeleeiveelkekl......lekylekge....eevpvvpgSalkgegidaLleaive 184
                 ++++ ++ ++Dt G ++F++   + +r  Dg++ v++ ++     e      l+ +++ + +    +++v  K D+v  +++ +  v e+++ l       ++     +      +  + +S+++ge+++  +e iv+
   MMETSP1325-20131115|875_1 227 DNRQDNLEILDTAGQDEFTQYRHQWMRHKDGYIFVFSLTNRqslHELDAYAQLHYMENCNKPvtppVLLVGSKRDLVenGENRQVSVAEAEQSLsrwrdmFRH-----SevrlGPFIYMETSSKTGENVERAFENIVR 359
                 57788999*****************************99776664444445555555555445465667889*****88777777777777777554443222.....123334677788899999999888887765 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   4.1e-05     0.047       2     147 ..     186     329 ..     185     343 .. 0.55

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4.1e-05
  PF13521.1   2 ivitGgpstGKTtlleaLa.....argypvvpEvarevle.eklakgeealpweedllafaeavleaqleqeaaaaaskllfc....Drglldtl.aYarllggdaekeleeaarekrydlvfllppepei.eqDgeRredeeeaeaiderlrealee 147
                ++i+G+p++GK+ l+ ++      a+  p+++++ r+ +  ++ +++ e l+ +    +f +      ++q+ ++ +++++f+     r  l++l aYa+l       ++ e ++++    v+l+    ++ e+ ++R+ +++eae++  r r++++ 
  MMETSP1325-20131115|875_1 186 VAILGTPGVGKSALTHHFIhgsfvAYHDPTIEDAYRKTVFvDNRQDNLEILDTA-GQDEFTQ-----YRHQWMRH-KDGYIFVfsltNRQSLHELdAYAQL-------HYMENCNKPVTPPVLLVGSKRDLvENGENRQVSVAEAEQSLSRWRDMFRH 329
                89***************9733333445557766666544404445555555443.3233333.....34445443.2333322011133333333233322.......33334445455667777777777556666667777777777777777665 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.4e-05     0.016      21      44 ..     180     204 ..     174     297 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.4e-05
  PF13191.1  21 egsp.lllvtGpsGiGKSsLlrela 44 
                ++s+  + ++G +G+GKS+L+++++
  MMETSP1325-20131115|875_1 180 RSSRlYVAILGTPGVGKSALTHHFI 204
                33335899**************944 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.9e-05     0.022       4     148 ..     188     328 ..     185     362 .. 0.69

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.9e-05
  PF04670.7   4 LmGksgsGKtSmrs.iiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspeakvfvli..hKmDlisedereeifeer.keeireeiedle 148
                ++G  g GK+++    i   ++a +  +++     +++ +  +++ +l+++D+ Gq+ef++      +++ +++ +  i+Vf  + r+  ++l+ + + l+++ ++++ ++  vl+   K Dl+++ e++++  +  ++++++  + ++
  MMETSP1325-20131115|875_1 188 ILGTPGVGKSALTHhFIHGSFVAYHDPTIEDAY--RKTVFVDNRQDNLEILDTAGQDEFTQY-----RHQWMRHKDGYIFVFSLTNRQSLHELDAYAQ-LHYMENCNKPVTPPVLLvgSKRDLVENGENRQVSVAEaEQSLSRWRDMFR 328
                577788888887541455556665544444433..333333344458*********999877.....79999*************9999999999876.79999999999999999566*****9876666555540555544444444 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.8e-05       0.1      14      52 ..     177     216 ..     150     219 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8.8e-05
  PF06745.8  14 gGipegr.vvlitGepGtGKtifalqFlikgaeeygepgv 52 
                gG  + r  v+i G+pG GK+ +  +F+  + + y +p++
  MMETSP1325-20131115|875_1 177 GGARSSRlYVAILGTPGVGKSALTHHFIHGSFVAYHDPTI 216
                66666551579*****************999988888775 PP

>> PF11834.3  Domain of unknown function (DUF3354)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00014      0.16      26      68 ..     124     167 ..     100     168 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00014
  PF11834.3  26 dsleeLleiaseKfgia.atkVlnedgAeIDdievIrDgDhLyl 68 
                 s++++ ++a+  + i+ ++kV+ ++g e+  i+ Ir gD  ++
  MMETSP1325-20131115|875_1 124 TSFRDFRRLAGDALLINnPAKVFLRNGTEVWGINDIRSGDLCFI 167
                699*************77**********************8776 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.7   3.1e+03      36      61 ..     109     136 ..      98     149 .. 0.74
   2 ?   10.6   0.0   0.00035       0.4       4      44 ..     183     227 ..     179     288 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 2.7
  PF13401.1  36 e..karvvfveapastspkellqkllsa 61 
                +  ++++v  ++p++ts +++++    a
  MMETSP1325-20131115|875_1 109 KgaESNAVPLTIPKGTSFRDFRRLAGDA 136
                1457888999999999999998866555 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00035
  PF13401.1   4 agilvvtGesGvGKTtllrrlarqldeeaeaae.....karvvfve 44 
                +  +++ G +GvGK+ l  ++ +    +a++++      +++vfv+
  MMETSP1325-20131115|875_1 183 RLYVAILGTPGVGKSALTHHFIHGSF-VAYHDPtiedaYRKTVFVD 227
                566899**************999753.3333333665555555554 PP

>> PF00493.18  MCM2/3/5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0    0.0003      0.35      24      77 ..     151     203 ..     126     212 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0003
  PF00493.18  24 psiyghedvkkaillqlfggvkkkledktklrgdinvllvGdpgtaKSqlLkyv 77 
                  +++g +d++ + l+ + +g   + +      +++ v ++G pg++KS+l ++ 
   MMETSP1325-20131115|875_1 151 TEVWGINDIRSGDLCFISSGEPFHNRG-GARSSRLYVAILGTPGVGKSALTHHF 203
                 4799****************9965554.666899***************97765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.81u 0.41s 00:00:01.22 Elapsed: 00:00:00.57
# Mc/sec: 1673.32
//
Query:       MMETSP1325-20131115|881_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       631  (0.0461527); expected 273.4 (0.02)
Passed bias filter:                      552  (0.0403745); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.42s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 736.66
//
Query:       MMETSP1325-20131115|883_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 283.21
//
Query:       MMETSP1325-20131115|876_1  [L=479]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-20   73.3   0.3      5e-20   71.6   0.0    2.0  2  PF08241.7  Methyltransferase domain
    1.7e-14   53.5   0.1    2.6e-14   52.9   0.0    1.3  1  PF13847.1  Methyltransferase domain
    1.3e-12   47.3   0.0    1.8e-12   46.8   0.0    1.1  1  PF02353.15 Mycolic acid cyclopropane synthetase
    4.9e-12   45.3   0.0    8.2e-12   44.6   0.0    1.3  1  PF01209.13 ubiE/COQ5 methyltransferase family
    4.9e-11   42.7   0.0      1e-10   41.7   0.0    1.6  1  PF13649.1  Methyltransferase domain
      1e-10   41.4   0.0    1.7e-10   40.7   0.0    1.4  1  PF13489.1  Methyltransferase domain
    1.1e-07   32.3   0.0    3.2e-07   30.7   0.0    1.8  1  PF12847.2  Methyltransferase domain
    1.7e-07   31.5   0.0    4.6e-07   30.1   0.0    1.8  2  PF08242.7  Methyltransferase domain
    2.2e-07   30.7   0.6    9.9e-06   25.4   0.0    2.5  2  PF13659.1  Methyltransferase domain
    9.4e-05   22.1   0.0    0.00019   21.1   0.0    1.4  1  PF08498.5  Sterol methyltransferase C-terminal
  ------ inclusion threshold ------
      0.015   14.6   0.0      0.035   13.3   0.0    1.6  2  PF05175.9  Methyltransferase small domain
      0.053   12.7   0.2       0.11   11.7   0.0    1.6  2  PF07021.7  Methionine biosynthesis protein MetW


Domain annotation for each model (and alignments):
>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   0.0   4.4e-23     5e-20       1      95 []     125     223 ..     125     223 .. 0.91
   2 ?   -1.5   0.0       2.9   3.3e+03       3      38 ..     347     388 ..     346     410 .. 0.75

  Alignments for each domain:
  == domain 1    score: 71.6 bits;  conditional E-value: 4.4e-23
  PF08241.7   1 LdvGcGtglllealaerpaarvtgvDlseemlatakerlkeegle....lvvadaeelpfednsfDvvvssevlehledpekalkeiaRvLkpgGllvi 95 
                Ld GcG g  ++ +++  +a+vt++ l++ ++++ +   k+eg +    lv++d++++pf+dn fD+v++ e  +h +d++ + kei RvLkpgG +++
  MMETSP1325-20131115|876_1 125 LDCGCGVGGPARNIHRFTSADVTALTLNQFQVDRGNVLCKKEGCSdmvrLVQGDFMKMPFPDNHFDAVFAIESTCHAPDRNGVYKEILRVLKPGGTFAC 223
                8********************************6555555555555555**********************************************9975 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 2.9
  PF08241.7   3 vGcGtglllealaer......paarvtgvDlseemlataker 38 
                +Gc +g +l  ++        +aa++ ++D  +  +a a++ 
  MMETSP1325-20131115|876_1 347 IGCAQGGHLGVFTXDvadggpEAAQISACDGAPXPCAMATAT 388
                789998888888887777788888888888887766555554 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.0   2.3e-17   2.6e-14       2     118 ..     119     233 ..     118     285 .. 0.89

  Alignments for each domain:
  == domain 1    score: 52.9 bits;  conditional E-value: 2.3e-17
  PF13847.1   2 ksgikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfe.nveFiqgdieeleklle.esfDlvisnevlnaladpqkvlkeiervlkpggrlivespsllaelp 118
                ++g kvlD+GCG G  +++++ +  ++a+v+ +  +++++ + + +++k g    v+  qgd+ +++  ++ + fD v++ e  ++ +d + v+kei rvlkpgg + + + +l ++++
  MMETSP1325-20131115|876_1 119 NKGAKVLDCGCGVGGPARNIH-R-FTSADVTALTLNQFQVDRGNVLCKKEGCSdMVRLVQGDFMKMP--FPdNHFDAVFAIESTCHAPDRNGVYKEILRVLKPGGTFACYEWCLTDKYD 233
                7899*****************.4.679*************************99*************..**************************************998888666665 PP

>> PF02353.15  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   1.6e-15   1.8e-12       9     217 ..      70     277 ..      63     298 .. 0.83

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 1.6e-15
                 HHHHHHTS-HHHHCCCS-TT---S----SSTT--HHHHHHHHHHHHHHTT------EEEE-------HHHHHHHHH--EEE--BS-HHHHHHHHHHHHCS-SSS-B---B---TT---...--SEEEE---GGGT--TCHHHHHHHHHHCS-----EEEEEEE---HHHHCC----THHHHHHT--------H...HHHHHHHHH---EEEEEEE CS
  PF02353.15   9 nikahYDlsndffalfldptmtYsCAyferddmtLeeAqlaKldlileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakqrvdeldlerkvevklldyedlde...kvdrvvsvgafehvgkenydtffkklkkllkedGllllhtitslhkkelaerglklkfidkeiFPgGelpsi...eeieeeiseagftvvdves 217
                  + + YDl+ +f+++  + +  ++   f+  d+t+ +  l+    + +kl++++G ++Ld GcG G+ +r+  +   ++v +lTl + q  + +  +++++ ++ v++   d+  ++    ++d+v +++ + h   +n    +k++ ++lk++G+++      ++k  ++++    + ++k+i  g  lp +   +  ++  ++ gf++++++ 
   MMETSP1325-20131115|876_1  70 LVDSYYDLATEFYEWGWGTSFHFAT-RFR--DETFRQSILRHEYYLAGKLGINKGAKVLDCGCGVGGPARNIHRFTSADVTALTLNQFQVDRGNVLCKKEGCSDMVRLVQGDFMKMPFpdnHFDAVFAIESTCHAPDRN--GVYKEILRVLKPGGTFACYEWCLTDKYDKNNAV--HRKVKKDIEVGDGLPDMchtSVCTKALENSGFKIIEARD 277
                 57889**********9999999875.454..567899999999999**********************999988889************************************998544469*********99987665..45789999********99876666655554222..256899998887787541115556688889999988766 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   7.2e-15   8.2e-12      44     154 ..     117     226 ..     102     240 .. 0.91

  Alignments for each domain:
  == domain 1    score: 44.6 bits;  conditional E-value: 7.2e-15
  PF01209.13  44 avkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegki.nieflqanaeeLpfeddsfDvvtvsfGlrnvtDklkaLkeayrvlkpGGrlvvlef 154
                 +  +gakvlD  +G g  a ++ +    + +v+ l +n+  ++ g+   k+eg +  ++++q++ +++pf d+ fD v         +D++ + ke+ rvlkpGG++ + e 
   MMETSP1325-20131115|876_1 117 GINKGAKVLDCGCGVGGPARNIHRFT--SADVTALTLNQFQVDRGNVLCKKEGCSdMVRLVQGDFMKMPFPDNHFDAVFAIESTCHAPDRNGVYKEILRVLKPGGTFACYEW 226
                 56789****************99875..5689999******************99779******************99888888899**********************996 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   8.9e-14     1e-10       1     101 []     124     219 ..     124     219 .. 0.91

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 8.9e-14
  PF13649.1   1 ildlGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskgl..kvkfvqadaralpfeegefdlvvcaglslehlspkqlealleeiarvlkpgG 101
                +ld GCG G  +r ++r      ++ v+++ +++ +++ ++   +++g+   v+ vq+d++++pf++++fd+v+   +    ++ ++   +++ei+rvlkpgG
  MMETSP1325-20131115|876_1 124 VLDCGCGVGGPARNIHRFT----SADVTALTLNQFQVDRGNVLCKKEGCsdMVRLVQGDFMKMPFPDNHFDAVFAIES-T--CHAPDRNGVYKEILRVLKPGG 219
                79*******9999998664....59*************************99***********************444.4..456788899***********9 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.0   1.5e-13   1.7e-10      19     124 ..     116     233 ..      94     275 .. 0.71

  Alignments for each domain:
  == domain 1    score: 40.7 bits;  conditional E-value: 1.5e-13
  PF13489.1  19 r.lkpggrvLDiGcGtGillellaen.gfdvtgvDpspaaigk..........akqaqksqfdeedaaepagkfdlivarevlehvpdpeellrqiaellkpgGylllstpnaslasd 124
                   ++g++vLD GcG G  ++ ++++  +dvt+  ++  ++ +           + ++ +q d ++  +p+++fd + a+e+++h pd   + ++i + lkpgG + + +++ +++ d
  MMETSP1325-20131115|876_1 116 LgINKGAKVLDCGCGVGGPARNIHRFtSADVTALTLNQFQVDRgnvlckkegcSDMVRLVQGDFMKMPFPDNHFDAVFAIESTCHAPDRNGVYKEILRVLKPGGTFACYEWCLTDKYD 233
                246999***********99****8883459******999998899999999985555555555567889***************************************9997653322 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   2.8e-10   3.2e-07       1     107 [.     120     221 ..     120     225 .. 0.92

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 2.8e-10
  PF12847.2   1 kgkrilDlGcGtGslslelarlrpgakvvgvDpseeslelarenaksldleeriellqgdakeelsller.fDavllkgltldallal.deprrvlealpkllkpggrl 107
                kg+++lD GcG+G  +  ++r +  a+v+++ +++  +++ +  +k+++ ++ ++l+qgd+  +  + ++ fDav++ +      +++ +++  v +++ + lkpgg++
  MMETSP1325-20131115|876_1 120 KGAKVLDCGCGVGGPARNIHR-FTSADVTALTLNQFQVDRGNVLCKKEGCSDMVRLVQGDF-MKMPFPDNhFDAVFAIE-----STCHaPDRNGVYKEILRVLKPGGTF 221
                6899*****************.8999****************999999999**********.666666667******99.....88888******************98 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         9     1e+04      64      70 ..      59      78 ..      38      81 .. 0.51
   2 !   30.1   0.0   4.1e-10   4.6e-07       1      98 [.     125     220 ..     125     221 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 9
  PF08242.7 64 g.............ssfDvv 70
                             s++D++
  MMETSP1325-20131115|876_1 59 SsegrdadyttlvdSYYDLA 78
               22223445556666777776 PP

  == domain 2    score: 30.1 bits;  conditional E-value: 4.1e-10
  PF08242.7   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.ssfDvvvasnvlhhlkdirevldnirklLkpgGv 98 
                L+ GcG+G  +r + +    +++t++ +++ ++ d+ + l k+e  + + v+l + d ++   + ++fD+v+a++   h++d++ v ++i ++LkpgG 
  MMETSP1325-20131115|876_1 125 LDCGCGVGGPARNIHRF-TSADVTALTLNQFQV-DRGNVLCKKE-GCSDMVRLVQGDFMKMPFPdNHFDAVFAIESTCHAPDRNGVYKEILRVLKPGGT 220
                899***********655.9**************.8888888887.589*********99888779*********************************7 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   8.7e-09   9.9e-06       1     114 [.     121     224 ..     121     227 .. 0.91
   2 ?    3.3   0.1     0.064        73      12      52 ..     353     398 ..     347     458 .. 0.78

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 8.7e-09
  PF13659.1   1 gdrvldpgcGsGtfllaalellaalllgvEldpraaalaarnlaraglaervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrdlydafleaaarllkpgGvlvli 114
                g +vld gcG G  +    +   a+++++ l+ + ++  +  +++ g ++ vr++qgd+++++  +++++fd+v++    +++        ++ + + ++++r+lkpgG +++ 
  MMETSP1325-20131115|876_1 121 GAKVLDCGCGVGGPARNIHRFTSADVTALTLNQFQVDRGNVLCKKEGCSDMVRLVQGDFMKMP--FPDNHFDAVFAIESTCHA--------PDRNGVYKEILRVLKPGGTFACY 224
                579******************9****************************************9..***********8888843........234568999**********9985 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.064
  PF13659.1  12 Gtfllaalell.....aalllgvEldpraaalaarnlaraglaerv 52 
                G++ +++ + +     aa++ +++  p  +a+a ++++ + +++++
  MMETSP1325-20131115|876_1 353 GHLGVFTXDVAdggpeAAQISACDGAPXPCAMATATATATVVPDEA 398
                56666666663334889*****************999987775543 PP

>> PF08498.5  Sterol methyltransferase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.7e-07   0.00019      18      56 ..     321     359 ..     311     361 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 1.7e-07
  PF08498.5  18 lvkvlEkiglaPkGskkvtdaLekAaegLVaGgkkklFT 56 
                +++++E i+l+PkG+k ++ +L+ +  g  +Gg+ ++FT
  MMETSP1325-20131115|876_1 321 ILSFFELIRLVPKGTKDTQIMLQAGGIGCAQGGHLGVFT 359
                6789**********************************9 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.1e-05     0.035      26     103 ..     115     193 ..     110     197 .. 0.90
   2 ?   -3.8   0.0       5.8   6.6e+03      43      77 ..     356     391 ..     352     398 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.1e-05
                HS-TT------B-------HHHHHHHH-TT----EEESBHHHHHHHHHHHHH----..--EEE-STTTT--..--BS-EE CS
  PF05175.9  26 tlpkklagkvlDlGcGaGvlgaalakespelevtlvDinarAvesakanleanklen.vevlasdlleeve.ekkfdliv 103
                 l  +++ kvlD GcG+G  + ++ + ++  +vt++  n+  v+  +  ++++++++ v++++ d ++    +++fd+++
  MMETSP1325-20131115|876_1 115 KLGINKGAKVLDCGCGVGGPARNIHRFTSA-DVTALTLNQFQVDRGNVLCKKEGCSDmVRLVQGDFMKMPFpDNHFDAVF 193
                555668899***************998887.9**********************************998776999**997 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 5.8
                --HHHHHHHH-TT--.--EEESBHHHHHHHHHHHHH CS
  PF05175.9  43 Gvlgaalakespele.vtlvDinarAvesakanlea 77 
                Gv +  +a+ +pe++ + ++D      ++a a+++a
  MMETSP1325-20131115|876_1 356 GVFTXDVADGGPEAAqISACDGAPXPCAMATATATA 391
                666666777777766677777776666666666655 PP

>> PF07021.7  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.4e-05      0.11      11     101 ..     118     214 ..     107     218 .. 0.72
   2 ?   -4.1   0.1       6.8   7.7e+03      16      27 ..     404     415 ..     401     416 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.4e-05
  PF07021.7  11 ikpgsrvldlGcGdGellellke..ekqvdgrGlel..deegvaecvakGlsviqgdldkdlen..fedksfdyvvlsqtlqatrnpkevldellri 101
                i++g++vld GcG G   + ++   + +v++  l++   ++g + c + G s +   ++ d+ +  f+d+ fd v    +     + + v +e+lr+
  MMETSP1325-20131115|876_1 118 INKGAKVLDCGCGVGGPARNIHRftSADVTALTLNQfqVDRGNVLCKKEGCSDMVRLVQGDFMKmpFPDNHFDAVFAIESTCHAPDRNGVYKEILRV 214
                7899*********998887776511456666666542224555679999987666666655543239*******99887777777788899999998 PP

  == domain 2    score: -4.1 bits;  conditional E-value: 6.8
  PF07021.7  16 rvldlGcGdGel 27 
                 vld G+Gd +l
  MMETSP1325-20131115|876_1 404 LVLDEGSGDCNL 415
                69******9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.82u 0.37s 00:00:01.19 Elapsed: 00:00:00.63
# Mc/sec: 1821.99
//
Query:       MMETSP1325-20131115|886_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 306.90
//
Query:       MMETSP1325-20131115|880_1  [L=856]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-10   40.5   2.8    5.3e-10   38.6   1.9    1.9  1  PF09815.4 XK-related protein


Domain annotation for each model (and alignments):
>> PF09815.4  XK-related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   1.9   3.9e-14   5.3e-10       3     162 ..      21     213 ..      19     225 .. 0.70

  Alignments for each domain:
  == domain 1    score: 38.6 bits;  conditional E-value: 3.9e-14
  PF09815.4   3 lltlvslllyfadigsdlwlavdYylegdyvwfaltlvfvllpsvvvqvlsllwflndlskrksk............................lkslllllllhllqlGvliRylkalylglrvsrekeeeek...................................yrklvseeaDlsmlrlleaFlesaPqLvLqlyillessevellqlvsilislvsi 162
                +  ++ + + ++di++dl++++++y+++++++f++ +++++++ +       + f++++++++++                                                       ++  +  + + ++                                   +++ ++++ +  +  l eaF+e+ Pq vLq++ ++  ++++ l++vsil+s+  +
  MMETSP1325-20131115|880_1  21 FHDAFTVTFSLLDIMTDLLVCIEFYRNKHMAFFWCSVSIFIVAQLSYA----FLFVATWATDHRNcskififmavlpfgqlipvfvwlesfrvP--------------------------CIDKCLTAMQLKPtglseqrdvalvytdgtgrvdvdvptsaaavdedgLWAYIQQKYAAHAGFLAEAFIEAIPQGVLQVVAIILLHDTTGLNVVSILMSISVV 213
                556788999*****************************9999888776....344444444444421122555555444333333333333332..........................33333333333334444555566677777777777777889*************************************9877766666999999999997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (856 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       588  (0.0430076); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.24u 0.39s 00:00:01.63 Elapsed: 00:00:00.99
# Mc/sec: 2072.00
//
Query:       MMETSP1325-20131115|889_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       683  (0.0499561); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1063.65
//
Query:       MMETSP1325-20131115|887_1  [L=336]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.034   13.9   1.8       0.13   12.0   1.3    2.0  1  PF01844.18 HNH endonuclease


Domain annotation for each model (and alignments):
>> PF01844.18  HNH endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.3   9.5e-06      0.13      27      45 ..     215     233 ..     192     234 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9.5e-06
  PF01844.18  27 addlsNlvllCksCHrkkh 45 
                  + ++N+v+ C+ C+ +k+
   MMETSP1325-20131115|887_1 215 PYVPDNCVPSCAPCNYMKN 233
                 4569***********9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1412.59
//
Query:       MMETSP1325-20131115|885_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.075   13.1   6.3       0.16   12.0   4.4    1.4  1  PF03879.9  Cgr1 family
        0.2   12.3   1.4       0.35   11.5   1.0    1.3  1  PF00639.16 PPIC-type PPIASE domain


Domain annotation for each model (and alignments):
>> PF03879.9  Cgr1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   4.4   2.3e-05      0.16      39      94 ..      87     144 ..      82     147 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.3e-05
  PF03879.9  39 keqeaiKerekelkeEkeeerq..rrieaikerraakeekeRyeklaakmhakkveRl 94 
                ++ +a+ +r +el+e  + +++   r+e++k+ + a  ++ R++ l++k+ +k +eR 
  MMETSP1325-20131115|885_1  87 QKAAAAQARRQELQEQAKMDAAeyDRVERLKSSKSAWGQQGRLDALKQKLMQKEIERI 144
                6677889999999987544433359********************************6 PP

>> PF00639.16  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.0   5.1e-05      0.35       9      68 ..      85     143 ..      77     153 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5.1e-05
  PF00639.16   9 seeekeeakakaeelleqlksgedtFaelakeySddkssakngGdLgwfergqlppefek 68 
                  +++ ++a+a+ +el+eq+k ++++ +++ +  S  ks   ++G L+ ++++ +++e+e+
   MMETSP1325-20131115|885_1  85 IQQKAAAAQARRQELQEQAKMDAAEYDRVERLKS-SKSAWGQQGRLDALKQKLMQKEIER 143
                 56788999**************************.88889999*************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       644  (0.0471036); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.59
# Mc/sec: 869.19
//
Query:       MMETSP1325-20131115|890_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-26   91.1   4.2    3.4e-26   91.1   2.9    2.1  2  PF00505.14 HMG (high mobility group) box
    2.9e-18   65.9   3.8    2.9e-18   65.9   2.6    2.1  2  PF09011.5  Domain of unknown function (DUF1898)
    0.00038   19.9   0.0     0.0006   19.3   0.0    1.3  1  PF08073.7  CHDNT (NUC034) domain
    0.00045   20.3   0.7    0.00068   19.8   0.1    1.6  2  PF04690.8  YABBY protein
  ------ inclusion threshold ------
          1    8.9   4.9        0.4   10.3   1.9    1.4  1  PF08496.5  Peptidase family S49 N-terminal
        3.7    7.2   5.7          5    6.8   3.9    1.3  1  PF14235.1  Domain of unknown function (DUF4337)


Domain annotation for each model (and alignments):
>> PF00505.14  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.096   2.2e+02      57      69 .]       3      15 ..       1      15 [. 0.87
   2 !   91.1   2.9   1.5e-29   3.4e-26       1      68 [.      40     107 ..      40     108 .. 0.99

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.096
                HHHHHHHHHGGGC CS
  PF00505.14 57 ekeeyekekpeYk 69
                +k++y++++++Y+
   MMETSP1325-20131115|890_1  3 DKARYDSAMADYE 15
                899******9995 PP

  == domain 2    score: 91.1 bits;  conditional E-value: 1.5e-29
                 ---S--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHTTTTS-HCCHHHHHHHHHHHHHHHHHHHGGG CS
  PF00505.14   1 pkRplsaFflfskeqraklkaenPdlkvaeiskklgekWkelseeeKkpYeekaekekeeyekekpeY 68 
                 pkR+++a+f+f+ e r+k+kaenPdl+v+e+sk +g+kWkel++eeK+p+eeka+++ke+y +ek++Y
   MMETSP1325-20131115|890_1  40 PKRATTAYFFFLAETREKVKAENPDLSVTELSKVVGAKWKELTPEEKAPFEEKAKADKERYAEEKKAY 107
                 8******************************************************************9 PP

>> PF09011.5  Domain of unknown function (DUF1898)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   2.6   1.3e-21   2.9e-18       1      69 [.      37     103 ..      37     104 .. 0.97
   2 ?    1.0   0.5      0.22   5.1e+02      49      59 ..     101     111 ..     100     120 .. 0.78

  Alignments for each domain:
  == domain 1    score: 65.9 bits;  conditional E-value: 1.3e-21
  PF09011.5   1 pkkpkrkrnAYflFvqtmrpelkregpqvpvglaevsklcsekWkalseeeKekYeekAkedkkrydre 69 
                p+ pkr++ AYf+F+ + r++ k+e+p+ +  + e sk +++kWk+l+ eeK ++eekAk+dk+ry +e
  MMETSP1325-20131115|890_1  37 PNAPKRATTAYFFFLAETREKVKAENPDLS--VTELSKVVGAKWKELTPEEKAPFEEKAKADKERYAEE 103
                899**************************6..**********************************987 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.22
  PF09011.5  49 eeeKekYeekA 59 
                +eeK++Y+ek 
  MMETSP1325-20131115|890_1 101 AEEKKAYDEKK 111
                5899***9874 PP

>> PF08073.7  CHDNT (NUC034) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.6e-07    0.0006      14      50 ..      45      81 ..      42      85 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 2.6e-07
  PF08073.7 14 tnyKaFsslvrPlilkeNPkiavsKlmmllaaKwrEF 50
               t y  F    r  + +eNP   v+ l  +++aKw+E 
  MMETSP1325-20131115|890_1 45 TAYFFFLAETREKVKAENPDLSVTELSKVVGAKWKEL 81
               556667777788899*********************6 PP

>> PF04690.8  YABBY protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1     3e-07   0.00068     109     160 ..      27      78 ..       3      86 .. 0.80
   2 ?   -0.8   0.0      0.64   1.4e+03      72      96 ..      90     114 ..      70     129 .. 0.47

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 3e-07
  PF04690.8 109 vprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160
                 +r  ++ + P+  +r+ +ay  f+ e  +++ka+nPd+s  e   +    W
  MMETSP1325-20131115|890_1  27 GKRKGKAAKDPNAPKRATTAYFFFLAETREKVKAENPDLSVTELSKVVGAKW 78 
                4556678999******************************999766665556 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.64
  PF04690.8  72 leelkveeenlksnvekeesastsv 96 
                 e+ k ++e + + ++++++++++ 
  MMETSP1325-20131115|890_1  90 EEKAKADKERYAEEKKAYDEKKAND 114
                3333333333333333333333322 PP

>> PF08496.5  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.9   0.00018       0.4      25      91 ..      48     115 ..      42     126 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00018
  PF08496.5  25 vvlivalakkkkkkkgeleitklneeykelkeeleealldk.eelkalekeekkeekekkkaekkkak 91 
                +++++++++k k+++ +l++t+l++   +  +el+ +     ee+ +++ke+ +eek++ +++k++ +
  MMETSP1325-20131115|890_1  48 FFFLAETREKVKAENPDLSVTELSKVVGAKWKELTPEEKAPfEEKAKADKERYAEEKKAYDEKKANDE 115
                556778888999999**********9988888887654444044444555555555554444433332 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.9    0.0022         5      60     105 ..      81     127 ..      52     132 .] 0.77

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0022
  PF14235.1  60 lleleaks..aaelkkkiekykkekkrikseakeleakakeaeeesde 105
                l+++e+ +  ++++k++ e+y++ekk +++++++ e+  +e  + sd+
  MMETSP1325-20131115|890_1  81 LTPEEK-ApfEEKAKADKERYAEEKKAYDEKKANDEDPMEEDSDSSDA 127
                333343.3589999***************9977777666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       979  (0.0716062); expected 273.4 (0.02)
Passed bias filter:                      508  (0.0371562); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.66
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|893_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-30  106.3   1.1    1.9e-30  106.0   0.8    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.0   0.8   1.4e-34   1.9e-30       3     155 ..      35     190 ..      33     191 .. 0.82

  Alignments for each domain:
  == domain 1    score: 106.0 bits;  conditional E-value: 1.4e-34
                 XXXXXXXXXXXX.XXXXXX.---...-TTTTT--------TTT------------------S--TT--.STT--.-.--....--S-TT.THHHH---HHHHHHHHTT------------------------..-----------STTT----TTTTT------- CS
  PF00504.16   3 aeldgslpgdlg.fDplglskdp...tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeag.g.ls....lptllalqillligflelareqelkapesegsekraypGglgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 +e+ g ++ ++g fDp+gl+++    tl ++r+aEl+H+Rv Mla++G+lv+ +++ +++  + ++++++++ g + l+    +p ++ +qill++g++e+++e ++++     ++k + p gl  dplgl    +e+  ++  + E+ nGRlAMi++++f+++a
   MMETSP1325-20131115|893_1  35 EEMAG-VQDPVGlFDPMGLATSGndeTLLWFRAAELKHSRVTMLATAGWLVNSAGIYFPG--ELTHGTKFSDLGaKpLEawaaVPFAGKFQILLFAGAVEFFSEVKKPH-----YMKGG-PMGLQCDPLGLYenMSEDMRKTRMNRELANGRLAMIGIMSFIAAA 190
                 67778.99************544566***************************9999775..4566677766553232123349999**************97766544.....34444.88899*****99988899999999******************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 866.05
//
Query:       MMETSP1325-20131115|895_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 198.32
//
Query:       MMETSP1325-20131115|891_1  [L=502]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.4e-120  401.1   0.0   1.7e-120  400.8   0.0    1.0  1  PF05221.12 S-adenosyl-L-homocysteine hydrolase
    3.4e-78  261.0   2.1    4.9e-78  260.4   1.5    1.2  1  PF00670.16 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
    2.5e-08   33.1   0.1    4.3e-08   32.4   0.1    1.3  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
     0.0017   17.6   0.2      0.003   16.8   0.1    1.4  1  PF07991.7  Acetohydroxy acid isomeroreductase, catalytic domain
      0.002   18.0   0.6       0.13   12.1   0.2    3.0  2  PF02254.13 TrkA-N domain
  ------ inclusion threshold ------
      0.028   13.3   1.9       0.11   11.4   1.3    1.9  1  PF02882.14 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
      0.036   14.2   0.2      0.087   12.9   0.1    1.6  1  PF13241.1  Putative NAD(P)-binding


Domain annotation for each model (and alignments):
>> PF05221.12  S-adenosyl-L-homocysteine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  400.8   0.0    9e-124  1.7e-120       2     266 ..       5     480 ..       4     481 .. 0.97

  Alignments for each domain:
  == domain 1    score: 400.8 bits;  conditional E-value: 9e-124
                 --B-S-GGGTT---HHHHHHGGG----HHHHHH-----TT...TT-EEE-----SHHHHHHHHHHHH---EEEEE-SSTTT--HHHHHHHTSTT.EEEE--TT--HHHHHHHHHHHH----....-----EEEE----HHHHHH-.........................................HHHHHHTT----EE-S----HHHHHHHHTT---S-EEESTTSHHHHTTT.................................................................................................................................................................--HHHHHHHHHHHHHHHHHHHHTTTSSS-.-SSEE---HHHHHHHHHHHTCCCT-------HHHHHH---------S-TT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx.........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................................................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05221.12   2 eykvkdislaefGrkelelaekemPGlmalreeygdskPl...kgakiaGclhmtvqtavlietlkalGaevrwascnifstqdaaaaaiakag.vpvfawkgeteeeylwcieralkfkd....gkklnlilddGGdatllvlk.........................................kytellkkikGvseetttGvkrlyklekegklkvpainvndsvtkskfd.................................................................................................................................................................hpsfvmsvsftnqvlaqielfekkdtgky.ekkvyllPkkldekvaklhlakldvkltkltdeqaeylgvpveGPfksde 266
                 +y+v+disla+fGrke+elae+emPGlma+r+ey ++  +   k +++aG+lhmt+qtavliet+kalGa++rw+scnifstqd+aaaaia++g ++vfawkget+eey++c+ +a+++++    g ++++i+ddGGd+tll+++                                         k+t+++++ +GvseetttGv+rly+++++++l++ ainvndsvtkskfd                                                                                                                                                                 hpsfvms+sftnq++aqiel++++++gky + kvy+lPk ldekva+lhl++l+v+lt lt++qa y  ++ eGP ++ +
   MMETSP1325-20131115|891_1   5 DYRVADISLADFGRKEIELAEHEMPGLMACRAEYPSDYFVengKPCRVAGSLHMTIQTAVLIETMKALGADLRWCSCNIFSTQDHAAAAIARDGsAAVFAWKGETLEEYWECTMNAITWTNpdekGDGPDMIIDDGGDMTLLIHEgkkaedifekdgtvpdpastdnaefklvltmicrtlktdpkKWTKIADRFIGVSEETTTGVHRLYQMQENNSLLFRAINVNDSVTKSKFDnlygckhslpdglcratdvmlagkkalicgygdvgkgcafamkaagcityvteidpicalqasmegfpvvkfetvvsqidivitttgnkdiirvehmaamknnaivgnighfdneiqmealeaattrnnikpqvdkfvfpdghgvivlaegrlmnlgcatgHPSFVMSCSFTNQTVAQIELWTERNSGKYaKGKVYVLPKVLDEKVARLHLGQLGVELTSLTSDQAGYXLCADEGPVQAGH 480
                 7*********************************9986653336789********************************************876378**********************752222578*********************************************************************************************************************************************************************************************************************************************************************************************************5568******************************************98765 PP

>> PF00670.16  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.4   1.5   2.5e-81   4.9e-78       1     162 []     240     400 ..     240     400 .. 0.99

  Alignments for each domain:
  == domain 1    score: 260.4 bits;  conditional E-value: 2.5e-81
                 CCHHHTTTTT---HHHH-S-----EEEEE---------HHHHHH---EEEE--S-HHHHHHHHC---EE--HHHCTTT-SEEEE-----SSB-HHHHCCS-TTEEEEE---TTTTBTHHHHHTTT-EEEEEETTEEEEE-----EEEEE-----SGGGT--- CS
  PF00670.16   1 nlygcreslvdgikratdvliaGkvavvaGyGdvGkGcaaslkalGarvivtevdPicalqaameGfevvtleevvkkadivvtttGnkdiitlehlekmkddaivcniGhfdseidvaaleanalkkeevkpqvdrytlkdgkkiillaeGrllnlgcatg 162
                 nlygc++sl dg+ ratdv++aGk+a+++GyGdvGkGca ++ka+G++ +vte+dPicalqa+meGf vv++e vv++ div+tttGnkdii++eh+++mk++aiv+niGhfd+ei+++alea  ++++++kpqvd+++++dg+ +i+laeGrl+nlgcatg
   MMETSP1325-20131115|891_1 240 NLYGCKHSLPDGLCRATDVMLAGKKALICGYGDVGKGCAFAMKAAGCITYVTEIDPICALQASMEGFPVVKFETVVSQIDIVITTTGNKDIIRVEHMAAMKNNAIVGNIGHFDNEIQMEALEAA-TTRNNIKPQVDKFVFPDGHGVIVLAEGRLMNLGCATG 400
                 89***********************************************************************************************************************987.8999*******************************97 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.1   2.2e-11   4.3e-08      33     140 ..     259     363 ..     246     373 .. 0.85

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 2.2e-11
                 .GGGSEEE-B-------HHHHHHHH---EEEE--SS--...HHHH---EE--CCCCCCC-SEEEE----STTTTT-B-HHHHCCS-TT-EEEE---.GGGB-HHHHHHH CS
  PF02826.14  33 elsgktvGiiGlGrIGqavakrlkafgmkvlaydrskkkeeeeeelgaevvsleellaesDvvslhlpltpetrhlinaeelakmkkgailiNtaR.GglvdeeaLlea 140
                  l+gk+  i G+G +G+  a  +ka g+  ++++  +  + +++ +g+ vv++e+++++ D+v+     t  ++++i  e++a+mk++ai+ N++   + ++ eaL +a
   MMETSP1325-20131115|891_1 259 MLAGKKALICGYGDVGKGCAFAMKAAGCITYVTEIDPICALQASMEGFPVVKFETVVSQIDIVIT----TTGNKDIIRVEHMAAMKNNAIVGNIGHfDNEIQMEALEAA 363
                 589*************************999999987766699999*****************97....5569********************9973344555555555 PP

>> PF07991.7  Acetohydroxy acid isomeroreductase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   1.5e-06     0.003       2      70 ..     260     327 ..     259     363 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 1.5e-06
                H----EEEE-------HHHHHHHH----EEE------HHHHHHHH---EE--HHHHHHT-SEEEE-S-G CS
  PF07991.7   2 lkekkiaviGyGsqGhaqalnlrdsgldvvvglregsksvekakkdgfevltveeavkkadvvmiliPD 70 
                l +kk  + GyG  G+  a  ++  g+   v+   +   + +a+ +gf v++ e +v++ d+v+  +  
  MMETSP1325-20131115|891_1 260 LAGKKALICGYGDVGKGCAFAMKAAGCITYVTEI-DPICALQASMEGFPVVKFETVVSQIDIVITTTGN 327
                7899**********************96666555.5558999*********************987654 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.083   1.6e+02      69      98 ..     168     197 ..     166     200 .. 0.89
   2 !   12.1   0.2   6.6e-05      0.13       2      48 ..     266     312 ..     265     371 .. 0.81

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.083
                 --SSHHHHHHHHHHHCCC-TTSEEEEEESS CS
  PF02254.13  69 atgddeanllavllakelnpkkkiiaraqd 98 
                  t++ e +l++++++++l  ++k ++++ d
   MMETSP1325-20131115|891_1 168 STDNAEFKLVLTMICRTLKTDPKKWTKIAD 197
                 68999****************999998876 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 6.6e-05
                 EEE---HHHHHHHCCCHH.--..EEEEES-HHHHHHHHH---EEEE-- CS
  PF02254.13   2 iiiGlGrvGrslaeeLre.gekdvvvidkdeerveelreeglevvvgd 48 
                 +i+G+G vG+  a ++++ g+    v + d+  + +++ eg++vv+ +
   MMETSP1325-20131115|891_1 266 LICGYGDVGKGCAFAMKAaGCI-TYVTEIDPICALQASMEGFPVVKFE 312
                 7*****************7776.99*******9*********999854 PP

>> PF02882.14  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.3   5.7e-05      0.11      26     110 ..     252     351 ..     236     394 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.7e-05
                 HHHH--..--S-EEEEE---TT---HHHHHHHCTT-EEEEE-TT-.............ST---HHHHSSEEEE-------B-GGG-...----EEEE---E CS
  PF02882.14  26 llketgielegkkvvvvGrsnivgkplallLleknatVtvchskt.............kdlaeilreaDivvvavGkpelvkaemv...kegavviDvGin 110
                 l ++t++ l+gkk+++ G ++ vgk  a+ ++++++++ v++                 + ++++++ Div++ +G++++++ e++   k++a+v ++G+ 
   MMETSP1325-20131115|891_1 252 LCRATDVMLAGKKALICGYGD-VGKGCAFAMKAAGCITYVTEIDPicalqasmegfpvVKFETVVSQIDIVITTTGNKDIIRVEHMaamKNNAIVGNIGHF 351
                 678899999*********987.8**********9877665544322222224444545678999*****************98875455999999999974 PP

>> PF13241.1  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   4.5e-05     0.087       5      75 ..     260     332 ..     258     356 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.5e-05
                -TT-EEEEE-------HHHHHHTT---EEEEE-SS--TT-T..............-TT--EEEEE--S-HHHHH CS
  PF13241.1   5 lkgkkvlvvGgGevAarkvrklleagakvtvvspeikeleelvkla...eeefeedlegadlviaatddeelne 75 
                l gkk l+ G G+v++  + ++ +ag+   v   +  ++  + +++     +fe  ++++d+vi+ t ++++ +
  MMETSP1325-20131115|891_1 260 LAGKKALICGYGDVGKGCAFAMKAAGCITYVTEID-PICALQASMEgfpVVKFETVVSQIDIVITTTGNKDIIR 332
                789***********************988887777.55655444442225667999***********9987644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.85u 0.35s 00:00:01.20 Elapsed: 00:00:00.69
# Mc/sec: 1743.44
//
Query:       MMETSP1325-20131115|896_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-16   60.1   0.0    1.2e-16   60.0   0.0    1.0  1  PF01039.17 Carboxyl transferase domain


Domain annotation for each model (and alignments):
>> PF01039.17  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.0   8.9e-21   1.2e-16      40     129 ..       3     107 ..       1     108 [] 0.95

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 8.9e-21
                 C-.-TCEEEEE---------GCCCCTECCEESSTSSTCHHCC...CCHHHHHHHHH.............--EEEEEEEE-----.TT---TTT-----HHHHHHHHH CS
  PF01039.17  40 kr.lprdgvvtgsGaviGravevvaqdftvlggslgpakgek...llkaqelalke.............glpligindsgGaegriqegvenlrgsGkifganskas 129
                 +r +pr +++++sGa+iG a  v   +++++  + +pa+g+k   l++a++ ++               ++++++++d++G   + ++gvenlrgsG+i+g++ +a+
   MMETSP1325-20131115|896_1   3 ERkIPRLYLAANSGARIGLAKTVRDAFQVAWTNAENPAEGFKylyLTPADYAKFGGsdpavkckrvfegEEERWMLTDVIGE--EADLGVENLRGSGMIAGETCRAY 107
                 455***************************************9999999999999899************************..678******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.59
# Mc/sec: 438.66
//
Query:       MMETSP1325-20131115|892_1  [L=689]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-24   85.3   0.0    9.7e-24   83.8   0.0    1.8  1  PF00005.22 ABC transporter
    3.8e-18   65.7   1.6    5.2e-18   65.3   1.1    1.2  1  PF00664.18 ABC transporter transmembrane region
      1e-05   24.7   0.0    1.3e-05   24.4   0.0    1.2  1  PF02463.14 RecF/RecN/SMC N terminal domain
  ------ inclusion threshold ------
      0.025   14.6   0.4       0.63   10.1   0.0    2.5  2  PF09523.5  Protein of unknown function (DUF2390)
      0.053   13.3   0.0      0.093   12.5   0.0    1.4  1  PF13304.1  AAA domain
      0.083   11.6   0.7       0.13   11.0   0.0    1.6  2  PF03915.8  Actin interacting protein 3


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.8   0.0   4.3e-27   9.7e-24       2     118 .]     347     478 ..     347     478 .. 0.96

  Alignments for each domain:
  == domain 1    score: 83.8 bits;  conditional E-value: 4.3e-27
                 HHHHHHTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S--.....-HHHHHHHHHH---HHHH--...........----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   2 TLlklltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekk.....tdkrieevlekvgldelldk...........srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 T ++l+ + ++pt+gei +   ++ l +++l++lr  i++++q++ lf + t+ren+ ++ +e++      ++rie++++k  + +++++           +++ ++SgGqkqr+a+Ara++++p++l+LDEPt+
   MMETSP1325-20131115|892_1 347 TSINLIKRFYNPTSGEILLG--GRPLADYDLHALRrhISVVSQENVLF-SSTIRENIIYGLSEEEkrapdIEARIEAACRKASIWDDIQTlfprklesfvgEKGFKMSGGQKQRIAIARAMIRNPTFLILDEPTS 478
                 679*****************..6789999*******************.***********9998899*******************99999******************************************96 PP

>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   1.1   2.3e-21   5.2e-18      44     274 ..      29     259 ..       2     260 .. 0.86

  Alignments for each domain:
  == domain 1    score: 65.3 bits;  conditional E-value: 2.3e-21
  PF00664.18  44 ailliavgvlivlllqgsfyllertgqrirkrlfrallrkilglfdsffdknsvGellsrltnDvskirdglgdklglffqslatfvgglivmfylgwkltlvllailpllilvsavlakilkslqkkeqkayakagavaeEalsgirtVkafggeekeleryekaleeakkagikkaitagllfgftqlisylsy.alalwfgtflsvisgelsvgtvfaflslglqlsgp 274
                  +++++  ++++l   + + ++++ ++  ++ ++ +++r++l+++ ++fd++++G l  rl++D+  + + l +   ++++ +a++++ l+v +++  +l+   ++ +p++++ ++v  k +++l ++  + +  a a + E+++ +rtV+ f++e+ e+++++    +  ++     ++ +++fg+  +++++ + ++a+  g+   v ++ l++g  + f + +++ls +
   MMETSP1325-20131115|892_1  29 LVTYFVRWIFFILAHVVGSSCMNKANSEFSTNIRNEVMRSMLRQDVEYFDRTPSGVLQERLNKDAAELAQHLFEEPKTLLRCIAVIISNLMVLYQIDRRLMTSAFLPVPVVVCTQYVMIKFIRTLGRRLRNMSERAAADTAEIIKELRTVREFAKEDSECDKFTFTSSYRAQIEEFGNAIRNICFGWPLFLIFMGNrMFAMSQGGRG-VLDQSLTIGVAIQFTVCVNILSDH 259
                 344555555555555556666777777777777777777777777777777******************************************************9**************************************************************99999999999********9999999998**********.************999999999876 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   5.5e-09   1.3e-05     135     213 ..     299     525 ..      49     530 .. 0.71

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 5.5e-09
                 T.....................................................................................................................................................G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHH...HH-BTBEEEEE-S-HHHHTT-SEEE--EE CS
                 x.....................................................................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 135 e.....................................................................................................................................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellk...eksknaQfivislreemlekadklvgvtk 213
                 +                                                                                                                                                     ++SgG+k+ +a+a      +++   + +lDe  +aLD  n + + + l+   +++k+   ++i++r ++l+k+d+++ + k
   MMETSP1325-20131115|892_1 299 KltaihgtlefkdvdfavpdkkilskmnfkvepgmtvgfcgaagcgkltsinlikrfynptsgeillggrpladydlhalrrhisvvsqenvlfsstireniiyglseeekrapdiearieaacrkasiwddiqtlfprklesfvgekgfKMSGGQKQRIAIA----RAMIRNPTFLILDEPTSALDSVNEKVIQDALDkmmAQNKQGSTLMIAHRLTTLKKCDRIFVMNK 525
                 0555555555555555555555555566666677777777777777777777777777777777777777777777777777777777777777777777788888888888888888888888888888888888888888888888889******988875....56899999********************999854445666779**************9987665 PP

>> PF09523.5  Protein of unknown function (DUF2390)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00028      0.63      29      85 ..     134     190 ..     128     204 .. 0.84
   2 ?    1.8   0.2      0.11   2.4e+02      39      82 ..     563     613 ..     552     622 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00028
  PF09523.5  29 anVnllLlalwlaeqgvslsaeelealqaaveewreevvqplRalRralkkaaketa 85 
                + V+++ + +++  + ++   ++l+++ ++++  ++e+++ lR++R+ +k++++ ++
  MMETSP1325-20131115|892_1 134 LPVPVVVCTQYVMIKFIRTLGRRLRNMSERAAADTAEIIKELRTVREFAKEDSECDK 190
                5689999999999999999999****************************9998874 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.11
  PF09523.5  39 wlaeqgvslsaeelealqaaveewreevvqplRal.......Rralkkaak 82 
                w  ++g++ s+ ++++  a +++w +++ +++Ral       Rr l +++k
  MMETSP1325-20131115|892_1 563 WETQNGKTSSHGDVSDTSAHTHKWIAHLEAKVRALessnrklRRDLAHHHK 613
                667777777777777777777777766666665541110000555555555 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   4.1e-05     0.093     235     272 ..     448     482 ..     352     508 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.1e-05
  PF13304.1 235 sdlSdGtkrllalltallsalekgsvlliDEpEngLHP 272
                + +S G+k+ +a++ a ++++   ++l++DEp + L+ 
  MMETSP1325-20131115|892_1 448 FKMSGGQKQRIAIARAMIRNP---TFLILDEPTSALDS 482
                456******************...***********997 PP

>> PF03915.8  Actin interacting protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.8e-05      0.13     351     412 ..     394     453 ..     374     458 .. 0.81
   2 ?   -3.6   0.1       1.5   3.4e+03     175     176 ..     576     577 ..     478     610 .. 0.50

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.8e-05
  PF03915.8 351 kelkdqv...lvevralkpdhesRleAieraeklrqkerelrrvdefekELgdFVeekkLkksGG 412
                +++++++   l+e ++  pd e+R+eA  r   +++  +       f + L++FV+ek +k sGG
  MMETSP1325-20131115|892_1 394 STIRENIiygLSEEEKRAPDIEARIEAACRKASIWDDIQT-----LFPRKLESFVGEKGFKMSGG 453
                566666633345667889***********99999997666.....8******************9 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 1.5
  PF03915.8 175 ik 176
                ++
  MMETSP1325-20131115|892_1 576 VS 577
                22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (689 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.13u 0.40s 00:00:01.52 Elapsed: 00:00:00.90
# Mc/sec: 1834.54
//
Query:       MMETSP1325-20131115|900_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-14   51.6   0.4    1.7e-13   49.9   0.1    1.9  2  PF00658.13 Poly-adenylate binding protein, unique domain
    0.00052   19.4   0.2    0.00085   18.8   0.1    1.3  1  PF01805.15 Surp module
  ------ inclusion threshold ------
        7.2    5.7   7.8         11    5.1   0.0    2.3  2  PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal


Domain annotation for each model (and alignments):
>> PF00658.13  Poly-adenylate binding protein, unique domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.18   8.3e+02      46      57 ..     108     119 ..     107     123 .. 0.88
   2 !   49.9   0.1   3.7e-17   1.7e-13      14      72 .]     126     184 ..     116     184 .. 0.93

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.18
  PF00658.13  46 mdnselLelles 57 
                 md++ lLe+l+s
   MMETSP1325-20131115|900_1 108 MDVASLLEMLNS 119
                 99999***9987 PP

  == domain 2    score: 49.9 bits;  conditional E-value: 3.7e-17
  PF00658.13  14 eeqkqilGErLYpkiqaqepelagKiTGmLLemdnselLelleseelLkakveeAlevl 72 
                 ee+ + lG  +Yp++++ +p+ a+K+TGmLLe+d+s++L ll++ +++k+  ++Ale+l
   MMETSP1325-20131115|900_1 126 EERSHRLGLVMYPIVEQWYPQQASKLTGMLLELDESDVLPLLSDMDEFKDVANQALEAL 184
                 667778999***********************************************987 PP

>> PF01805.15  Surp module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   1.9e-07   0.00085      26      51 ..      24      48 ..       8      50 .. 0.86

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 1.9e-07
                HH..SGGG-TTT--SSSHHHHHHHHH CS
  PF01805.15 26 reqdnpkFnFLkdsdspyhvYYrwkl 51
                + + +p F FLk++ +p+h+Y++++l
   MMETSP1325-20131115|900_1 24 KFGHDPSFGFLKEY-NPLHAYFEHLL 48
                55789*********.*********98 PP

>> PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   3.6     0.045   2.1e+02      18      30 ..      78      90 ..      76      93 .. 0.83
   2 ?    5.1   0.0    0.0025        11      28      40 ..     133     145 ..     132     146 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.045
               HHHH--------- CS
  PF10399.4 18 ATaavgaVGaaaa 30
                Taav++ G aaa
  MMETSP1325-20131115|900_1 78 STAAVATAGGAAA 90
               6999999999997 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0025
                ---HHHHHHHTSS CS
  PF10399.4  28 aaaawPlIdqmnP 40 
                +++++P++ q+ P
  MMETSP1325-20131115|900_1 133 GLVMYPIVEQWYP 145
                6899********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.60
# Mc/sec: 762.84
//
Query:       MMETSP1325-20131115|903_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 218.62
//
Query:       MMETSP1325-20131115|904_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   13.1   0.1      0.033   12.9   0.0    1.0  1  PF07555.8  beta-N-acetylglucosaminidase
      0.034   12.8   0.3      0.046   12.4   0.2    1.1  1  PF08367.6  Peptidase M16C associated
      0.043   12.8   0.1      0.051   12.6   0.1    1.0  1  PF02387.10 IncFII RepA protein family
      0.043   13.4   0.1      0.059   13.0   0.0    1.2  1  PF14223.1  gag-polypeptide of LTR copia-type
      0.046   12.5   0.8      0.053   12.3   0.6    1.1  1  PF12018.3  Domain of unknown function (DUF3508)
      0.071   11.6   2.1      0.088   11.3   1.5    1.1  1  PF08317.6  Spc7 kinetochore protein
       0.08   12.6   0.1       0.11   12.2   0.1    1.1  1  PF10547.4  P22_AR N-terminal domain


Domain annotation for each model (and alignments):
>> PF07555.8  beta-N-acetylglucosaminidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.7e-05     0.033      58     138 ..      11      99 ..       3     114 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.7e-05
                HHHHHHHHHCTT-EEEEEE---SS--.....TT...-HHHHHHHHHHHHHHHC----EEEEE-TS-SSS--TTTTTT-SSHHHHHHHHH CS
  PF07555.8  58 lkeLvkaakenkvdFvyaispgldik.....ys...seedleallaKleqlydlGvrsfaillDDieaelveadkekaqsaaeaqvkll 138
                l e ++   +++++F+y++ p  +       y+   ++ed+++++  l ++ +   + +++ lD +++++ +++++ + s a+ ++kl+
  MMETSP1325-20131115|904_1  11 LPEFIRHRIDEQCRFIYMLMPASKQGawerqYDqqvENEDVKNVIDELATMNQHERHLINLKLDALQSHVENTNSHAKISMADLKAKLT 99 
                66778888899**********988776555533777999****************************9999999888877777777664 PP

>> PF08367.6  Peptidase M16C associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   2.3e-05     0.046      11      72 ..      43     104 ..      38     113 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.3e-05
  PF08367.6  11 keeeeeekLekkkkkLseedkekiiergkeLeelQkeeedlsvLPtLtledipksikeyele 72 
                +++ e+e+++++  +L   ++ +    +++L++lQ++ e++++  +++++d++ + + ++ e
  MMETSP1325-20131115|904_1  43 DQQVENEDVKNVIDELATMNQHERHLINLKLDALQSHVENTNSHAKISMADLKAKLTALSEE 104
                6889***********************************************99988776655 PP

>> PF02387.10  IncFII RepA protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   2.6e-05     0.051      10     101 ..       7      94 ..       3     103 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.6e-05
  PF02387.10  10 vkNpnPvFtppkeekkrpkfirkamkkaseidvarselnytllpkdpktgellkrkRrlnehRarAlrAlvqamlyhlnilsnlVqaSieqL 101
                 v+   P+F  ++ + ++ +fi  +m + ++     +e  y  +  +  +++++     +n+h +  ++  + a+  h++ +  + ++S++ L
   MMETSP1325-20131115|904_1   7 VYDILPEFIRHRID-EQCRFIYMLMPASKQ-GA--WERQYDQQVENEDVKNVIDELATMNQHERHLINLKLDALQSHVENTNSHAKISMADL 94 
                 77788999966554.678999888876554.44..4556666666778889******************************99999999887 PP

>> PF14223.1  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     3e-05     0.059       3      62 ..      51     110 ..      49     118 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3e-05
  PF14223.1   3 akeiWdaLkkeyegsdrvkearlqtLrkefenlkmkegesvdeyldrlkeivnklrslGe 62 
                 k + d L+++++ + ++ + +l++L++  en++ + + s+ +   +l+ + ++++  G 
  MMETSP1325-20131115|904_1  51 VKNVIDELATMNQHERHLINLKLDALQSHVENTNSHAKISMADLKAKLTALSEEIAGTGG 110
                68999*************************************************998885 PP

>> PF12018.3  Domain of unknown function (DUF3508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.6   2.7e-05     0.053      37      97 ..      42      99 ..      17     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.7e-05
  PF12018.3 37 enptmakevpekllkeaLynlrQyeiflkillsdvdalaqevekeqkrleaqiekLketlk 97
               +++++++e+  k + ++L+ ++Q+e  l  +  ++dal+++ve+++++ +  +++Lk++l 
  MMETSP1325-20131115|904_1 42 YDQQVENEDV-KNVIDELATMNQHERHL--INLKLDALQSHVENTNSHAKISMADLKAKLT 99
               4666666664.5569**********987..55578999999****************9886 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.5   4.5e-05     0.088     171     226 ..      51     106 ..      39     109 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4.5e-05
  PF08317.6 171 klelinsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekie 226
                  + i++++   ++  + ++ +l+ L+++ ++++++ +  +++l+ +L++l+e+i+
  MMETSP1325-20131115|904_1  51 VKNVIDELATMNQHERHLINLKLDALQSHVENTNSHAKISMADLKAKLTALSEEIA 106
                456777888777888888999*********************************97 PP

>> PF10547.4  P22_AR N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   5.4e-05      0.11      36     103 ..      37     105 ..      32     108 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.4e-05
  PF10547.4  36 sWksqlkklkkdkvkssvveitivasdgkkremlclpleklngwLftinp.ekv.rpelrdklikyqeEc 103
                +W++q+ +  ++++  +v++  + + + ++r+++ l l+ l++++   n   k+  ++l+ kl +  eE 
  MMETSP1325-20131115|904_1  37 AWERQYDQQVENEDVKNVIDELA-TMNQHERHLINLKLDALQSHVENTNShAKIsMADLKAKLTALSEEI 105
                6******9999999999999998.678899**************97665314552689999999888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1078  (0.0788473); expected 273.4 (0.02)
Passed bias filter:                      787  (0.0575629); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.42s 00:00:00.89 Elapsed: 00:00:00.66
# Mc/sec: 450.22
//
Query:       MMETSP1325-20131115|897_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-31  106.7   0.3    9.1e-31  106.2   0.2    1.2  1  PF00252.13 Ribosomal protein L16p/L10e


Domain annotation for each model (and alignments):
>> PF00252.13  Ribosomal protein L16p/L10e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   0.2   6.6e-35   9.1e-31       1     132 [.      12     173 ..      12     174 .. 0.85

  Alignments for each domain:
  == domain 1    score: 106.2 bits;  conditional E-value: 6.6e-35
                 -GGG.STSSSS-.--TTT-----.........--TTSGGG...........EEEEESS-EEEEHHHHHHHHHHHHHHHHH..---....EEETT---EEEB--SSS-------.........--BSEEEEEE----ECEEE.TTTH-SCCCCCHHHHHGGGSSS-EEEE CS
  PF00252.13   1 Pkrt.kyrkkqkytrieygkgvk.........gnklafge...........ygLvalepgritanqleaarlainrylkk..ggk....lwirvfphlpvtkkpaevrmGkGK.........GkpdgwaarvkpGqiifev.egnvseeeakealrraasKlPiktkiv 132
                 P+r+ +++k+++  +++y++gv+         g      +           ++Lv+ e+++it+ +leaar+a+n+y+ k  g k    +++r++ph++++++++ +++G+++         Gkp ++aar+++G +i++v +++ + e + ealrra+ K+P+++ki 
   MMETSP1325-20131115|897_1  12 PARCsRFQKNKPFIKSRYCRGVPdpkirifdcG------NkkagvdvfpfvAHLVSDEKEQITSCALEAARVACNKYMIKeaG-KegfhIRVRCHPHHVIRQNKMLSCAGADRlstgmrhsyGKPMERAARINIGDPIMSVrSKDTHAEAVIEALRRAKFKFPGRQKIL 173
                 77883455555577777******5555555544......15555679*******************************77642.33555****************************************************7555788******************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 1064.54
//
Query:       MMETSP1325-20131115|902_1  [L=489]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00019   21.4   0.0    0.00072   19.5   0.0    1.9  1  PF05036.8 Sporulation related domain
  ------ inclusion threshold ------
        2.7    7.3   7.4        4.5    6.6   5.1    1.2  1  PF08597.5 Translation initiation factor eIF3 subunit


Domain annotation for each model (and alignments):
>> PF05036.8  Sporulation related domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0     1e-07   0.00072      28      62 ..     423     454 ..     417     458 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 1e-07
                ----...-EEEE----EEEE--------HHHHHHH CS
  PF05036.8  28 kgyaakvavtsgggglyrVrvGpfasreeAqaalk 62 
                kg +   +  +++g ++rV+vGp+ s+e+A+a+++
  MMETSP1325-20131115|902_1 423 KGKP---WLRENDGFWTRVVVGPYRSEEDAAALIN 454
                5555...667899*****************99875 PP

>> PF08597.5  Translation initiation factor eIF3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.1   0.00065       4.5      42     106 ..     171     235 ..     164     245 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00065
  PF08597.5  42 eeekekekakkaakakakkelkakieekekakkekkekekekkeeeldeedeaaekerlrkleee 106
                 e k ++k+++ +kakak+++k k+++  + k+++k+k + +++ e+++  +a ek r +    +
  MMETSP1325-20131115|902_1 171 SEPKPRPKPTPTPKAKAKAKTKSKAKATGRVKAKAKTKPRLRTSAEISQTLPADEKPRSQPVAVQ 235
                45556666666666666666666666666666666666666668899999999999998866655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       485  (0.035474); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.81u 0.37s 00:00:01.18 Elapsed: 00:00:00.71
# Mc/sec: 1650.45
//
Query:       MMETSP1325-20131115|907_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.66
# Mc/sec: 203.33
//
Query:       MMETSP1325-20131115|899_1  [L=429]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.75
# Mc/sec: 1370.72
//
Query:       MMETSP1325-20131115|899_2  [L=537]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.81u 0.35s 00:00:01.16 Elapsed: 00:00:00.67
# Mc/sec: 1920.66
//
Query:       MMETSP1325-20131115|905_1  [L=752]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-44  149.3   9.3    4.7e-23   81.3   0.4    2.4  2  PF03176.10 MMPL family
     0.0013   18.1   1.4     0.0013   18.1   1.0    2.6  2  PF12349.3  Sterol-sensing domain of SREBP cleavage-activation
  ------ inclusion threshold ------
       0.12   10.2   0.1       0.54    8.1   0.0    1.9  2  PF02460.13 Patched family
       0.12    9.6   5.1       0.25    8.6   0.2    2.0  2  PF00873.14 AcrB/AcrD/AcrF family


Domain annotation for each model (and alignments):
>> PF03176.10  MMPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   1.7   1.2e-23     4e-20     196     305 ..       7     116 ..       3     133 .. 0.94
   2 !   81.3   0.4   1.4e-26   4.7e-23      88     268 ..     439     633 ..     436     636 .. 0.90

  Alignments for each domain:
  == domain 1    score: 71.6 bits;  conditional E-value: 1.2e-23
  PF03176.10 196 glelstfvlgllvvlliavGtDYallLvsRyreelaagedreeaviravastgkvvtaaGltvaiamlgLvvarlpvlaqvGvaialGvlvdvlivlTllPAllvllGra 305
                  +++ +f+++ ++ l+ia ++DY l+L+sR+ ee ++g++ +ea+  ++  +g++++ +G t++  +lg ++  l +l++vG+ +++++l+++ + lTl+PA+l  +G  
   MMETSP1325-20131115|905_1   7 NMDVVSFTPSVMMSLTIAMSIDYSLFLLSRIMEETNEGRTLDEAIPSMLDNAGHTILVSGGTLVCCFLGNLFFPLAMLQSVGIGASTALLMALSVNLTLTPAVLYSIGPQ 116
                 578899***************************************************************************************************99987 PP

  == domain 2    score: 81.3 bits;  conditional E-value: 1.4e-26
  PF03176.10  88 aralvtlegdpgsteadesvaairaaveear..pleglkvevtGpaatladlrdasdrdlklievvtlvvilviLlivyrSlvaallplltvvvsllaalgl.vlilalll...........glelstfvlgllvvlliavGtDYallLvsRyreelaagedreeaviravastgkvvtaaGltvaiamlgLvva 268
                 + ++++l+ dp+++++ e +++ r+++++ +       k +++  a ++ d ++a+      i+  t++v+++++  +++S+va+l  ++t  + l   +gl vl+ ++ +           + ++ +f + + + ++++ G DY ++L+sR  e++ +g + ++a+ + v  tg  +taaG+++aia+ gL+++
   MMETSP1325-20131115|905_1 439 TVYQINLDIDPFDQDGVEWLKKARDVLDKYEkdSSVQFKMYLANGAGITYDAEEAVYGAFPAIIGCTMAVVFCLMGFAFGSIVAPLRSVATLCLTLSFVFGLlVLVYQDGAfdfmgmramskVGTVCWFPPVMCFSIIVGLGLDYDVFLISRVFEYRLEGYTDHAAALKGVYMTGYIITAAGVIMAIAFGGLMAS 633
                 6799*************************9966777889*******************************************************************998642211111111134677999**************************************************************987 PP

>> PF12349.3  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   1.0   3.7e-07    0.0013      38     133 ..      14     110 ..       3     121 .. 0.87
   2 ?   -0.5   0.2      0.19   6.5e+02      40      96 ..     569     627 ..     550     635 .. 0.57

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 3.7e-07
  PF12349.3  38 ileviPflvlavGvdnm.fllvkavqrtskslsveeriaealgevgpsilltsltellafligaltdvpavqeFclfaavavlfdFllqitfFvavL 133
                +  v+  l +a+++d + fll + +++t++  + +e i  +l ++g+ il++  t +++fl  +++++  +q+  + a +a+l+    ++t+  avL
  MMETSP1325-20131115|905_1  14 TPSVMMSLTIAMSIDYSlFLLSRIMEETNEGRTLDEAIPSMLDNAGHTILVSGGTLVCCFLGNLFFPLAMLQSVGIGASTALLMALSVNLTLTPAVL 110
                44577779999***96527777888889999999**************************************************9999999988887 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.19
  PF12349.3  40 eviPf.lvlavGvd.nmfllvkavqrtskslsveeriaealgevgpsilltsltellaf 96 
                 v+ f ++++ G+d ++fl+ + ++   +  +++    ++   +g++i+++ +   +af
  MMETSP1325-20131115|905_1 569 PVMCFsIIVGLGLDyDVFLISRVFEYRLEGYTDHAAALKGVYMTGYIITAAGVIMAIAF 627
                44444355666666666666666666666666666666666666666665555554444 PP

>> PF02460.13  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00016      0.54     289     391 ..      21     124 ..      13     287 .. 0.91
   2 ?   -0.3   0.0     0.056   1.9e+02     247     283 ..     486     521 ..     425     561 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00016
  PF02460.13 289 LvLaiGvD.dvflmvaawqrttkkesvkkRisevlseagvaItitslTdvlsFgiGaiTttpeiqlfClytavavlfdfiYqitffaavlaivakaeaegrevl 391
                 L +a+ +D ++fl+   +++t++ +++ + i  +l +ag  I+++  T v  F    + +++ +q   ++++ a+l++    +t+  avl   +   ++ +  l
   MMETSP1325-20131115|905_1  21 LTIAMSIDySLFLLSRIMEETNEGRTLDEAIPSMLDNAGHTILVSGGTLVCCFLGNLFFPLAMLQSVGIGASTALLMALSVNLTLTPAVLYSIGPQLMACQDWL 124
                 77888899668999999*************************************99*********************999999999999988777777666555 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.056
  PF02460.13 247 vsskpilailgvlspllAivsalGllfllGfrfnsil 283
                 +++   +a+ g + +++ +  a+ + +l+Gf f+si+
   MMETSP1325-20131115|905_1 486 ITYDAEEAVYGAFPAIIGCTMAV-VFCLMGFAFGSIV 521
                 44555566667776777666665.4467777777775 PP

>> PF00873.14  AcrB/AcrD/AcrF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.6    0.0037        13     391     485 ..      19     109 ..       7     132 .. 0.83
   2 ?    8.6   0.2   7.2e-05      0.25     839     915 ..     477     551 ..     463     566 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.0037
                 -TTT---HHHHHHHHHHHHHHHHHH----HHHHHHHH-----------HHHHHHHCCCCCG-------HHHHHHHHHHHHHHHHHHHHHCTHHHH CS
  PF00873.14 391 LvlAiGlvvDdAiVvvEnverkleeegekpleaalksmkeiegalvaialvllavfvPilflgGveGklfrqfaltivlaillsvlvaltltPal 485
                 + l i + +D +   +  + ++ +e g +  ea+    ++ + +++ +  +l+  f+  lf+     ++ ++ ++  + a+l+++ v ltltPa+
   MMETSP1325-20131115|905_1  19 MSLTIAMSIDYSLFLLSRIMEETNE-GRTLDEAIPSMLDNAGHTILVSGGTLVCCFLGNLFFP---LAMLQSVGIGASTALLMALSVNLTLTPAV 109
                 4445567788888888888777777.7777888888889999999999999999999999986...589************************98 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 7.2e-05
                 T..S-S---SEE---HCCCHH---HHHHHHHHHHHHHHHHHHHHTTSSSCCHHHCTTTT..------HHHHHH----BS CS
  PF00873.14 839 qvklPagvgiewtglseqeqeagnsllllvalalllvflvLaalyeslsdpllvlltvP..lalvGallalllrglels 915
                 ++ l +g+gi++     +e+  ++ +++++  ++ +vf ++++ + s+++pl  + t+   l++v +ll l+  + +++
   MMETSP1325-20131115|905_1 477 KMYLANGAGITYD----AEEAVYGAFPAIIGCTMAVVFCLMGFAFGSIVAPLRSVATLCltLSFVFGLLVLVYQDGAFD 551
                 5666666666664....46677899***************************877666511556777887777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       512  (0.0374488); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.15u 0.39s 00:00:01.54 Elapsed: 00:00:00.91
# Mc/sec: 1980.29
//
Query:       MMETSP1325-20131115|910_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.6   0.2      0.014   15.3   0.1    1.1  1  PF02085.11 Class III cytochrome C family


Domain annotation for each model (and alignments):
>> PF02085.11  Class III cytochrome C family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.1     1e-06     0.014      21      84 ..      11      73 ..       3      86 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1e-06
                EEE-CCCCTTS...-HHHHSTCTT--B--S-TT-SS----TTTSTTSHHHHHHHSS.S.HHHHHHH CS
  PF02085.11 21 vafnHkaHaevk..eCeeCHhkeeekeeiekcstcHaeekekkekkslekalHkkkaaksCvgCHk 84
                 ++ H+aH+ ++  + ++C h  +++ +  + +t H+++  ++ +  l +al +  + +sC++C +
   MMETSP1325-20131115|910_1 11 RQIGHSAHSGAQllQSAQCQHGSSTTLRSLSWHTTHTSR--SSASAALASALLALAT-ASCFSCFT 73
                5678****977678********99999999999999998..4444678888888555.5*****76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.44s 00:00:00.81 Elapsed: 00:00:00.72
# Mc/sec: 322.84
//
Query:       MMETSP1325-20131115|906_1  [L=553]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.1e-147  479.7   9.7    5.1e-19   68.2   0.0    5.8 10  PF12796.2  Ankyrin repeats (3 copies)
      1e-57  191.4   0.2    2.1e-10   40.7   0.0    8.1  9  PF13637.1  Ankyrin repeats (many copies)
    1.7e-57  188.3   4.0    1.1e-05   24.8   0.1   11.4 11  PF00023.25 Ankyrin repeat
    1.3e-38  127.0   0.0     0.0021   18.0   0.0   11.1 11  PF13606.1  Ankyrin repeat
      9e-37  124.1  13.5    3.3e-06   27.0   0.0   10.4 11  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.019   15.2   0.6         59    3.9   0.0    4.4  5  PF10554.4  Ash protein family
      0.024   14.1   0.0        5.6    6.4   0.0    3.1  3  PF07675.6  Cleaved Adhesin Domain


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0     1e-15   1.9e-12       4      86 ..      53     149 ..      50     152 .. 0.90
   2 !   60.5   0.0     7e-20   1.4e-16       1      81 [.      92     177 ..      92     184 .. 0.95
   3 !   56.8   0.0   9.7e-19   1.9e-15       1      87 [.     126     215 ..     126     217 .. 0.90
   4 !   55.7   0.0   2.2e-18   4.2e-15       2      86 ..     160     247 ..     159     250 .. 0.91
   5 !   60.6   0.0   6.1e-20   1.2e-16       3      86 ..     193     280 ..     191     283 .. 0.96
   6 !   63.8   0.0   6.4e-21   1.2e-17       2      86 ..     225     313 ..     224     316 .. 0.96
   7 !   68.2   0.0   2.6e-22   5.1e-19       3      87 ..     259     347 ..     257     349 .. 0.96
   8 !   68.2   0.0   2.7e-22   5.2e-19       3      86 ..     292     379 ..     291     382 .. 0.97
   9 !   51.9   0.0   3.1e-17   6.1e-14       3      78 ..     325     404 ..     323     411 .. 0.93
  10 !   12.4   0.0   6.7e-05      0.13       3      55 ..     391     448 ..     389     472 .. 0.78

  Alignments for each domain:
  == domain 1    score: 47.1 bits;  conditional E-value: 1e-15
  PF12796.2   4 AaengnlelvklLlekgadvdlget...............pLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklLlekgadvn 86 
                 ++ g+++ v   l  ga+vd  +t               +L+lA++ g++++v  Ll++gadv  +   +g ++L+ A+ +g++++v++L++ ga ++
  MMETSP1325-20131115|906_1  53 SIRDGDPSGVGAALRDGASVD--STifvarefgqaageisALMLAIQLGHHQVVHELLKRGADVHWTRpSNGTSALFTAAFTGNTDAVRWLVKLGAGIE 149
                577888999999999******..77778888888899999************************888889************************99775 PP

  == domain 2    score: 60.5 bits;  conditional E-value: 7e-20
  PF12796.2   1 LhlAaengnlelvklLlekgadvdl.....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlek 81 
                L+lA++ g+ ++v  Ll+ gadv++     g ++L+ Aa  gn+++v++L++ ga +++ +++g tp ++A+ +gh+e+v+lL ++
  MMETSP1325-20131115|906_1  92 LMLAIQLGHHQVVHELLKRGADVHWtrpsnGTSALFTAAFTGNTDAVRWLVKLGAGIETPNNKGATPAFIAAAKGHVEVVRLLAKE 177
                89**********************999887777**************************************************875 PP

  == domain 3    score: 56.8 bits;  conditional E-value: 9.7e-19
  PF12796.2   1 LhlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87 
                L+ Aa +gn ++v++L++ ga +++    g tp ++Aa++g++e+v+lL + +  ++  +++g tp  +A+r g++e+v++L + ga+v+ 
  MMETSP1325-20131115|906_1 126 LFTAAFTGNTDAVRWLVKLGAGIETpnnkGATPAFIAAAKGHVEVVRLLAKEE-RIEKPNNKGATPAWIAAREGQVEVVRVLATLGANVDT 215
                788******************99999888899*****************9975.44444456**************************986 PP

  == domain 4    score: 55.7 bits;  conditional E-value: 2.2e-18
  PF12796.2   2 hlAaengnlelvklLlekg..advdl.getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86 
                ++Aa +g++e+v+lL +++   +++  g tp  +Aa+ g++e+v++L   ga+v++ d++g tp ++A+ +g++e+v+lL + ga ++
  MMETSP1325-20131115|906_1 160 FIAAAKGHVEVVRLLAKEEriEKPNNkGATPAWIAAREGQVEVVRVLATLGANVDTPDNYGVTPAFVAAHKGQVEVVRLLAKLGAGIE 247
                58*************986656677767799****************************************************999765 PP

  == domain 5    score: 60.6 bits;  conditional E-value: 6.1e-20
  PF12796.2   3 lAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86 
                +Aa+ g++e+v+ L   ga+vd+    g tp ++Aa +g++e+v+lL + ga +++ ++eg tp  +A++ g++e+v+lL ++ga+v+
  MMETSP1325-20131115|906_1 193 IAAREGQVEVVRVLATLGANVDTpdnyGVTPAFVAAHKGQVEVVRLLAKLGAGIETPNNEGATPAWIAAQEGQVEVVRLLAKRGANVE 280
                79*********************8777777********************************************************96 PP

  == domain 6    score: 63.8 bits;  conditional E-value: 6.4e-21
  PF12796.2   2 hlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86 
                ++Aa +g++e+v+lL + ga +++    g tp  +Aa+ g++e+v+lL ++ga+v++  + g tp ++A+  g++e+v+lL++ ga+v+
  MMETSP1325-20131115|906_1 225 FVAAHKGQVEVVRLLAKLGAGIETpnneGATPAWIAAQEGQVEVVRLLAKRGANVETPRDTGATPAFVAAHEGQVEVVRLLVKLGANVE 313
                58*********************99889999********************************************************97 PP

  == domain 7    score: 68.2 bits;  conditional E-value: 2.6e-22
  PF12796.2   3 lAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87 
                +Aa+ g++e+v+lL + ga+v++    g tp ++Aa  g++e+v+lL++ ga+v++ d++g tp  +A+r g++e+v+lL + ga+v+ 
  MMETSP1325-20131115|906_1 259 IAAQEGQVEVVRLLAKRGANVETprdtGATPAFVAAHEGQVEVVRLLVKLGANVETPDNDGATPVWIAAREGQVEVVRLLAKLGASVDT 347
                79**********************999999*******************************************************9985 PP

  == domain 8    score: 68.2 bits;  conditional E-value: 2.7e-22
  PF12796.2   3 lAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86 
                +Aa  g++e+v+lL++ ga+v++    g tp+ +Aa+ g++e+v+lL + ga+v++ +++g tp ++A+++g++e+v++L+e ga+v+
  MMETSP1325-20131115|906_1 292 VAAHEGQVEVVRLLVKLGANVETpdndGATPVWIAAREGQVEVVRLLAKLGASVDTPNNYGVTPAIIAACAGDVEVVRVLVELGANVE 379
                79*********************9999999********************************************************96 PP

  == domain 9    score: 51.9 bits;  conditional E-value: 3.1e-17
  PF12796.2   3 lAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklL 78 
                +Aa+ g++e+v+lL + ga+vd+    g tp  +Aa+ag++e+v++L+e ga+v++    g tp ++A++ gh+ +++lL
  MMETSP1325-20131115|906_1 325 IAAREGQVEVVRLLAKLGASVDTpnnyGVTPAIIAACAGDVEVVRVLVELGANVETLGLIGATPAYFAAMEGHANIIRLL 404
                79*********************8777777************************9999********************99 PP

  == domain 10    score: 12.4 bits;  conditional E-value: 6.7e-05
  PF12796.2   3 lAaengnlelvklLlekgadvdl.....getpLhlAaeagnleivklLleagadvnak 55 
                +Aa+ g++++++lL + +  + +     g  pL   +++g+le+ k Ll  ga v a+
  MMETSP1325-20131115|906_1 391 FAAMEGHANIIRLLDSLKPGLVTkpnhiGIAPLERSVDHGHLEATKTLLLLGAPVTAQ 448
                7999999999999955443333222224566999999***********9999988776 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.0   1.1e-13   2.1e-10       3      54 .]      90     142 ..      88     142 .. 0.97
   2 !   25.3   0.0   6.9e-09   1.4e-05      12      53 ..     133     174 ..     132     175 .. 0.96
   3 !   25.3   0.0     7e-09   1.4e-05       3      53 ..     157     206 ..     155     207 .. 0.89
   4 !   28.5   0.0   7.2e-10   1.4e-06       5      53 ..     191     239 ..     187     240 .. 0.94
   5 !   30.3   0.0     2e-10   3.8e-07       2      53 ..     221     272 ..     220     273 .. 0.95
   6 !   36.3   0.0   2.5e-12   4.8e-09       3      53 ..     288     338 ..     286     339 .. 0.96
   7 !   29.4   0.0   3.7e-10   7.2e-07       8      54 .]     326     372 ..     325     372 .. 0.97
   8 !   19.3   0.0   5.5e-07    0.0011      11      53 ..     362     404 ..     359     404 .. 0.94
   9 ?    2.7   0.0     0.092   1.8e+02       5      30 ..     423     448 ..     415     456 .. 0.76

  Alignments for each domain:
  == domain 1    score: 40.7 bits;  conditional E-value: 1.1e-13
  PF13637.1   3 taLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklLl 54 
                +aL+ a++ g++++v+ Ll++g+d++ t +++G++aL  Aa +gn +++++L+
  MMETSP1325-20131115|906_1  90 SALMLAIQLGHHQVVHELLKRGADVHWTrPSNGTSALFTAAFTGNTDAVRWLV 142
                799************************************************96 PP

  == domain 2    score: 25.3 bits;  conditional E-value: 6.9e-09
  PF13637.1  12 grlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                g++++v++L++ g+ i   +++G t+  iAa +g++e+++lL
  MMETSP1325-20131115|906_1 133 GNTDAVRWLVKLGAGIETPNNKGATPAFIAAAKGHVEVVRLL 174
                89*********99999999*********************99 PP

  == domain 3    score: 25.3 bits;  conditional E-value: 7e-09
  PF13637.1   3 taLhyaaisgrlelvklLlek.gidinrtdesGntaLhiAalrgnieilklL 53 
                t+ + aa++g++e+v+lL +  +i+  + +++G t+  iAa+ g++e+++ L
  MMETSP1325-20131115|906_1 157 TPAFIAAAKGHVEVVRLLAKEeRIE--KPNNKGATPAWIAAREGQVEVVRVL 206
                77899**************433676..8899******************988 PP

  == domain 4    score: 28.5 bits;  conditional E-value: 7.2e-10
  PF13637.1   5 LhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                   aa+ g +e+v+ L   g++++  d++G t+  +Aa +g++e+++lL
  MMETSP1325-20131115|906_1 191 AWIAAREGQVEVVRVLATLGANVDTPDNYGVTPAFVAAHKGQVEVVRLL 239
                5679*******************************************99 PP

  == domain 5    score: 30.3 bits;  conditional E-value: 2e-10
  PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                +t+ ++aa++g +e+v+lL + g+ i   +++G t+  iAa+ g++e+++lL
  MMETSP1325-20131115|906_1 221 VTPAFVAAHKGQVEVVRLLAKLGAGIETPNNEGATPAWIAAQEGQVEVVRLL 272
                7899*****************99999999*********************99 PP

  == domain 6    score: 36.3 bits;  conditional E-value: 2.5e-12
  PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                t+ ++aa+ g +e+v+lL++ g+++   d++G t++ iAa+ g++e+++lL
  MMETSP1325-20131115|906_1 288 TPAFVAAHEGQVEVVRLLVKLGANVETPDNDGATPVWIAAREGQVEVVRLL 338
                7789*********************************************99 PP

  == domain 7    score: 29.4 bits;  conditional E-value: 3.7e-10
  PF13637.1   8 aaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                aa+ g +e+v+lL + g++++  +++G t+ +iAa +g++e+++ L+
  MMETSP1325-20131115|906_1 326 AAREGQVEVVRLLAKLGASVDTPNNYGVTPAIIAACAGDVEVVRVLV 372
                899*****************************************995 PP

  == domain 8    score: 19.3 bits;  conditional E-value: 5.5e-07
  PF13637.1  11 sgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                +g++e+v+ L+e g+++  +   G t+ ++Aa+ g+ +i++lL
  MMETSP1325-20131115|906_1 362 AGDVEVVRVLVELGANVETLGLIGATPAYFAAMEGHANIIRLL 404
                79******************999*****************998 PP

  == domain 9    score: 2.7 bits;  conditional E-value: 0.092
  PF13637.1   5 LhyaaisgrlelvklLlekgidinrt 30 
                L + + +g+le+ k Ll  g+ + ++
  MMETSP1325-20131115|906_1 423 LERSVDHGHLEATKTLLLLGAPVTAQ 448
                45556689999999999888887766 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.1   5.8e-09   1.1e-05       4      29 ..      90     115 ..      88     116 .. 0.95
   2 !   15.1   0.0   6.7e-06     0.013       1      29 [.     121     149 ..     121     153 .. 0.89
   3 !   10.6   0.0   0.00017      0.34       2      21 ..     155     174 ..     154     176 .. 0.94
   4 !   17.8   0.0   9.6e-07    0.0019       2      33 .]     187     218 ..     186     218 .. 0.94
   5 !   12.7   0.0     4e-05     0.078       1      29 [.     219     247 ..     219     251 .. 0.88
   6 !   18.1   0.0   7.5e-07    0.0015       2      28 ..     253     279 ..     252     282 .. 0.95
   7 !   19.6   0.0   2.6e-07   0.00051       2      32 ..     286     316 ..     285     317 .. 0.92
   8 !   22.8   0.0   2.4e-08   4.7e-05       1      33 []     318     350 ..     318     350 .. 0.95
   9 !   19.1   0.0   3.6e-07   0.00071       1      28 [.     351     378 ..     351     381 .. 0.95
  10 !    9.0   0.0   0.00056       1.1       2      21 ..     385     404 ..     384     407 .. 0.94
  11 !    6.5   0.0    0.0036         7       5      31 ..     422     448 ..     419     450 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 5.8e-09
                 BHHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25   4 TPLHlAalrgnlevvklLlsqGAdln 29 
                 ++L+lA++ g+++vv  Ll++GAd++
   MMETSP1325-20131115|906_1  90 SALMLAIQLGHHQVVHELLKRGADVH 115
                 79**********************96 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 6.7e-06
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdln 29 
                 +G ++L  Aa+ gn++ v++L++ GA + 
   MMETSP1325-20131115|906_1 121 NGTSALFTAAFTGNTDAVRWLVKLGAGIE 149
                 7999*********************9765 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 0.00017
                 SCBHHHHHHHTTHHHHHHHH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklL 21 
                 G TP  +Aa +g++evv+lL
   MMETSP1325-20131115|906_1 155 GATPAFIAAAKGHVEVVRLL 174
                 88*****************9 PP

  == domain 4    score: 17.8 bits;  conditional E-value: 9.6e-07
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 G TP  +Aa+ g++evv+ L   GA+++  d+
   MMETSP1325-20131115|906_1 187 GATPAWIAAREGQVEVVRVLATLGANVDTPDN 218
                 89*************************98886 PP

  == domain 5    score: 12.7 bits;  conditional E-value: 4e-05
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdln 29 
                 +G TP  +Aa++g++evv+lL + GA + 
   MMETSP1325-20131115|906_1 219 YGVTPAFVAAHKGQVEVVRLLAKLGAGIE 247
                 599********************999765 PP

  == domain 6    score: 18.1 bits;  conditional E-value: 7.5e-07
                 SCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdl 28 
                 G TP  +Aa+ g++evv+lL ++GA++
   MMETSP1325-20131115|906_1 253 GATPAWIAAQEGQVEVVRLLAKRGANV 279
                 89************************8 PP

  == domain 7    score: 19.6 bits;  conditional E-value: 2.6e-07
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G TP  +Aa+ g++evv+lL++ GA++   d
   MMETSP1325-20131115|906_1 286 GATPAFVAAHEGQVEVVRLLVKLGANVETPD 316
                 88999*********************98776 PP

  == domain 8    score: 22.8 bits;  conditional E-value: 2.4e-08
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 dG TP  +Aa+ g++evv+lL + GA+++  ++
   MMETSP1325-20131115|906_1 318 DGATPVWIAAREGQVEVVRLLAKLGASVDTPNN 350
                 89**************************98876 PP

  == domain 9    score: 19.1 bits;  conditional E-value: 3.6e-07
                 TSCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdl 28 
                 +G TP  +Aa+ g++evv+ L++ GA++
   MMETSP1325-20131115|906_1 351 YGVTPAIIAACAGDVEVVRVLVELGANV 378
                 599************************8 PP

  == domain 10    score: 9.0 bits;  conditional E-value: 0.00056
                 SCBHHHHHHHTTHHHHHHHH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklL 21 
                 G TP   Aa+ g++++++lL
   MMETSP1325-20131115|906_1 385 GATPAYFAAMEGHANIIRLL 404
                 78999*************99 PP

  == domain 11    score: 6.5 bits;  conditional E-value: 0.0036
                 HHHHHHHTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25   5 PLHlAalrgnlevvklLlsqGAdlnaq 31 
                 PL   + +g+le  k Ll  GA ++aq
   MMETSP1325-20131115|906_1 422 PLERSVDHGHLEATKTLLLLGAPVTAQ 448
                 55566889*****************98 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.1e-06    0.0021       4      28 ..      90     114 ..      87     115 .. 0.94
   2 !   12.9   0.0   4.6e-05      0.09       1      28 [.     121     148 ..     121     150 .. 0.92
   3 !    7.7   0.0    0.0023       4.4       2      21 ..     155     174 ..     154     180 .. 0.91
   4 !    9.0   0.0   0.00086       1.7       2      29 ..     187     214 ..     186     215 .. 0.91
   5 !   12.1   0.0   8.4e-05      0.16       1      28 [.     219     246 ..     219     248 .. 0.92
   6 !    9.7   0.0    0.0005      0.97       2      29 ..     253     280 ..     252     281 .. 0.90
   7 !   13.3   0.0   3.6e-05     0.069       2      29 ..     286     313 ..     285     314 .. 0.93
   8 !   11.4   0.0   0.00014      0.27       1      29 [.     318     346 ..     318     347 .. 0.93
   9 !   13.3   0.0   3.5e-05     0.068       1      29 [.     351     379 ..     351     380 .. 0.94
  10 ?    1.5   0.0      0.22   4.4e+02       3      21 ..     386     404 ..     385     404 .. 0.90
  11 ?    1.5   0.0      0.23   4.5e+02       5      28 ..     422     445 ..     419     447 .. 0.86

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 1.1e-06
  PF13606.1   4 TpLhlAasngrielveaLlengadi 28 
                ++L+lA++ g+ ++v++Ll++gad+
  MMETSP1325-20131115|906_1  90 SALMLAIQLGHHQVVHELLKRGADV 114
                79**********************8 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 4.6e-05
  PF13606.1   1 nGnTpLhlAasngrielveaLlengadi 28 
                nG ++L++Aa  g++++v++L++ ga i
  MMETSP1325-20131115|906_1 121 NGTSALFTAAFTGNTDAVRWLVKLGAGI 148
                7999********************9976 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0023
  PF13606.1   2 GnTpLhlAasngrielveaL 21 
                G Tp ++Aa +g++e+v++L
  MMETSP1325-20131115|906_1 155 GATPAFIAAAKGHVEVVRLL 174
                679***************98 PP

  == domain 4    score: 9.0 bits;  conditional E-value: 0.00086
  PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                G Tp  +Aa+ g++e+v+ L   ga+++
  MMETSP1325-20131115|906_1 187 GATPAWIAAREGQVEVVRVLATLGANVD 214
                6688999*******************97 PP

  == domain 5    score: 12.1 bits;  conditional E-value: 8.4e-05
  PF13606.1   1 nGnTpLhlAasngrielveaLlengadi 28 
                +G Tp ++Aa++g++e+v++L + ga i
  MMETSP1325-20131115|906_1 219 YGVTPAFVAAHKGQVEVVRLLAKLGAGI 246
                799*******************999866 PP

  == domain 6    score: 9.7 bits;  conditional E-value: 0.0005
  PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                G Tp  +Aa+ g++e+v++L ++ga++ 
  MMETSP1325-20131115|906_1 253 GATPAWIAAQEGQVEVVRLLAKRGANVE 280
                6688999******************985 PP

  == domain 7    score: 13.3 bits;  conditional E-value: 3.6e-05
  PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                G Tp ++Aa+ g++e+v++L++ ga++ 
  MMETSP1325-20131115|906_1 286 GATPAFVAAHEGQVEVVRLLVKLGANVE 313
                6699*********************985 PP

  == domain 8    score: 11.4 bits;  conditional E-value: 0.00014
  PF13606.1   1 nGnTpLhlAasngrielveaLlengadin 29 
                +G Tp  +Aa+ g++e+v++L + ga ++
  MMETSP1325-20131115|906_1 318 DGATPVWIAAREGQVEVVRLLAKLGASVD 346
                688***********************987 PP

  == domain 9    score: 13.3 bits;  conditional E-value: 3.5e-05
  PF13606.1   1 nGnTpLhlAasngrielveaLlengadin 29 
                +G Tp  +Aa  g +e+v+ L+e ga++ 
  MMETSP1325-20131115|906_1 351 YGVTPAIIAACAGDVEVVRVLVELGANVE 379
                789***********************985 PP

  == domain 10    score: 1.5 bits;  conditional E-value: 0.22
  PF13606.1   3 nTpLhlAasngrielveaL 21 
                 Tp + Aa  g+ +++++L
  MMETSP1325-20131115|906_1 386 ATPAYFAAMEGHANIIRLL 404
                59999***********987 PP

  == domain 11    score: 1.5 bits;  conditional E-value: 0.23
  PF13606.1   5 pLhlAasngrielveaLlengadi 28 
                pL   + +g++e+ + Ll  ga +
  MMETSP1325-20131115|906_1 422 PLERSVDHGHLEATKTLLLLGAPV 445
                6777899***********999987 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.1    0.0041         8      18      42 ..      90     114 ..      80     115 .. 0.90
   2 !   23.8   0.0   1.7e-08   3.2e-05       1      56 []     107     162 ..     107     162 .. 0.86
   3 !   10.5   0.0   0.00025      0.49      12      51 ..     151     189 ..     147     191 .. 0.79
   4 !   14.6   0.0   1.4e-05     0.027       7      49 ..     178     220 ..     173     220 .. 0.88
   5 !   26.9   0.0   1.8e-09   3.5e-06       4      52 ..     209     256 ..     206     260 .. 0.93
   6 !   13.3   0.0   3.5e-05     0.069      13      52 ..     250     289 ..     248     290 .. 0.92
   7 !   27.0   0.0   1.7e-09   3.3e-06       1      53 [.     272     323 ..     271     326 .. 0.93
   8 !    9.0   0.0   0.00078       1.5      22      49 ..     325     352 ..     325     352 .. 0.95
   9 !   23.0   0.0   3.1e-08     6e-05       1      42 [.     338     378 ..     338     382 .. 0.90
  10 !   10.4   0.0   0.00027      0.54       1      35 [.     371     404 ..     371     405 .. 0.95
  11 ?   -1.1   0.0       1.2   2.3e+03      19      37 ..     422     440 ..     415     448 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0041
  PF13857.1  18 tpLhlAakggalevvrlLlapgadl 42 
                ++L+lA+  g+ +vv +Ll++gad 
  MMETSP1325-20131115|906_1  90 SALMLAIQLGHHQVVHELLKRGADV 114
                79********************995 PP

  == domain 2    score: 23.8 bits;  conditional E-value: 1.7e-08
  PF13857.1   1 Llehgpadvnatde.ggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                Ll++g adv++t++ +g+++L +Aa  g++++vr+L++ ga + + ++ g t+  +A
  MMETSP1325-20131115|906_1 107 LLKRG-ADVHWTRPsNGTSALFTAAFTGNTDAVRWLVKLGAGIETPNNKGATPAFIA 162
                89999.77777776267788888999***************************8776 PP

  == domain 3    score: 10.5 bits;  conditional E-value: 0.00025
  PF13857.1  12 tdeggntpLhlAakggalevvrlLlapgadlnlrdsdglt 51 
                 +++g tp  +Aa +g++evvrlL  +++ +   ++ g t
  MMETSP1325-20131115|906_1 151 PNNKGATPAFIAAAKGHVEVVRLLA-KEERIEKPNNKGAT 189
                689999******************9.55555555555555 PP

  == domain 4    score: 14.6 bits;  conditional E-value: 1.4e-05
  PF13857.1   7 advnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdg 49 
                +++   +++g tp  +Aa+ g++evvr L   ga+ ++ d++g
  MMETSP1325-20131115|906_1 178 ERIEKPNNKGATPAWIAAREGQVEVVRVLATLGANVDTPDNYG 220
                566778999*****************************99987 PP

  == domain 5    score: 26.9 bits;  conditional E-value: 1.8e-09
  PF13857.1   4 hgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdglta 52 
                 g a+v++ d++g+tp  +Aa++g++evvrlL + ga + + +++g t+
  MMETSP1325-20131115|906_1 209 LG-ANVDTPDNYGVTPAFVAAHKGQVEVVRLLAKLGAGIETPNNEGATP 256
                46.99******************************************99 PP

  == domain 6    score: 13.3 bits;  conditional E-value: 3.5e-05
  PF13857.1  13 deggntpLhlAakggalevvrlLlapgadlnlrdsdglta 52 
                +++g tp  +Aa  g++evvrlL ++ga+  +    g t+
  MMETSP1325-20131115|906_1 250 NNEGATPAWIAAQEGQVEVVRLLAKRGANVETPRDTGATP 289
                78999************************99999999887 PP

  == domain 7    score: 27.0 bits;  conditional E-value: 1.7e-09
  PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53 
                L+++g a+v + + +g tp  +Aa+ g++evvrlL++ ga+  + d+dg t++
  MMETSP1325-20131115|906_1 272 LAKRG-ANVETPRDTGATPAFVAAHEGQVEVVRLLVKLGANVETPDNDGATPV 323
                55666.9********************************************98 PP

  == domain 8    score: 9.0 bits;  conditional E-value: 0.00078
  PF13857.1  22 lAakggalevvrlLlapgadlnlrdsdg 49 
                +Aa+ g++evvrlL + ga+ ++ +++g
  MMETSP1325-20131115|906_1 325 IAAREGQVEVVRLLAKLGASVDTPNNYG 352
                59**********************9987 PP

  == domain 9    score: 23.0 bits;  conditional E-value: 3.1e-08
  PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadl 42 
                L++ g a+v++ +++g+tp  +Aa +g++evvr L++ ga+ 
  MMETSP1325-20131115|906_1 338 LAKLG-ASVDTPNNYGVTPAIIAACAGDVEVVRVLVELGANV 378
                56778.99****************************988875 PP

  == domain 10    score: 10.4 bits;  conditional E-value: 0.00027
  PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlL 35 
                L+e g a+v ++ + g tp ++Aa+ g+++++rlL
  MMETSP1325-20131115|906_1 371 LVELG-ANVETLGLIGATPAYFAAMEGHANIIRLL 404
                78999.999***********************987 PP

  == domain 11    score: -1.1 bits;  conditional E-value: 1.2
  PF13857.1  19 pLhlAakggalevvrlLla 37 
                pL   + +g+le+ + Ll 
  MMETSP1325-20131115|906_1 422 PLERSVDHGHLEATKTLLL 440
                78889999*****999993 PP

>> PF10554.4  Ash protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.035        68       7      27 ..     142     162 ..     138     211 .. 0.84
   2 ?    3.9   0.0      0.03        59       6      24 ..     239     257 ..     236     265 .. 0.86
   3 ?   -0.9   0.0      0.95   1.9e+03       6      23 ..     272     289 ..     268     296 .. 0.85
   4 ?   -2.7   0.0       3.3   6.5e+03       7      22 ..     306     321 ..     302     327 .. 0.83
   5 ?    1.1   0.0      0.22   4.2e+02       6      29 ..     338     361 ..     335     373 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.035
  PF10554.4   7 aKsgAgigapsitkapsdapa 27 
                 K gAgi++p++ +a+ + +a
  MMETSP1325-20131115|906_1 142 VKLGAGIETPNNKGATPAFIA 162
                689************987665 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.03
  PF10554.4   6 paKsgAgigapsitkapsd 24 
                +aK gAgi++p++ +a+ +
  MMETSP1325-20131115|906_1 239 LAKLGAGIETPNNEGATPA 257
                6899**********99866 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.95
  PF10554.4   6 paKsgAgigapsitkaps 23 
                +aK gA +++p  t+a+ 
  MMETSP1325-20131115|906_1 272 LAKRGANVETPRDTGATP 289
                69**********999985 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 3.3
  PF10554.4   7 aKsgAgigapsitkap 22 
                 K gA +++p++ +a+
  MMETSP1325-20131115|906_1 306 VKLGANVETPDNDGAT 321
                6889999999999886 PP

  == domain 5    score: 1.1 bits;  conditional E-value: 0.22
  PF10554.4   6 paKsgAgigapsitkapsdapaav 29 
                +aK gA++++p++ +++ + +aa 
  MMETSP1325-20131115|906_1 338 LAKLGASVDTPNNYGVTPAIIAAC 361
                6899*********99988777654 PP

>> PF07675.6  Cleaved Adhesin Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.33   6.4e+02      27      75 ..     114     164 ..     109     177 .. 0.75
   2 ?    6.4   0.0    0.0029       5.6      40      76 ..     194     230 ..     181     241 .. 0.75
   3 ?    3.4   0.0     0.024        47      52      73 ..     338     359 ..     308     372 .. 0.71

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.33
                --SBSS------..-----SS--EEEESS-TT-------EEEE-------- CS
  PF07675.6  27 anWkstlnefsa..laghngskvvlsasylassgaltpdnyLitpklegak 75 
                  W+  +n +sa  +a+ +g++ ++   +  ++g+ tp+n   tp++ +a 
  MMETSP1325-20131115|906_1 114 VHWTRPSNGTSAlfTAAFTGNTDAVRWLVKLGAGIETPNNKGATPAFIAAA 164
                67888888887766677777777777777778888*****99999985544 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0029
                ----SS--EEEESS-TT-------EEEE--------- CS
  PF07675.6  40 aghngskvvlsasylassgaltpdnyLitpklegakk 76 
                a+ +g+  v+    + ++++ tpdny +tp++ +a+k
  MMETSP1325-20131115|906_1 194 AAREGQVEVVRVLATLGANVDTPDNYGVTPAFVAAHK 230
                556666556666667778889**********977665 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.024
                SS-TT-------EEEE------ CS
  PF07675.6  52 sylassgaltpdnyLitpkleg 73 
                    ++ + tp+ny +tp++ +
  MMETSP1325-20131115|906_1 338 LAKLGASVDTPNNYGVTPAIIA 359
                444556679*********9943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.95u 0.38s 00:00:01.33 Elapsed: 00:00:01.00
# Mc/sec: 1325.19
//
Query:       MMETSP1325-20131115|909_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      445  (0.0325483); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.68
# Mc/sec: 461.65
//
Query:       MMETSP1325-20131115|911_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-27   95.8   0.2    7.1e-27   94.6   0.1    1.6  1  PF00112.18 Papain family cysteine protease
    0.00084   17.8   0.1     0.0012   17.3   0.1    1.2  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.1     1e-30   7.1e-27      77     218 ..       3     182 ..       1     184 [. 0.84

  Alignments for each domain:
  == domain 1    score: 94.6 bits;  conditional E-value: 1e-30
                 HHHHC---BBTTTS---......SSC-...S--CC..CC--C.......CCCECEEEEEESS..-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE-.................-BSSTCC-TTG--EEEEE---BSCT...........TC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
  PF00112.18  77 yikknggivtekdypYk......akeg..gkCkkk..kkkek......evakikgygkvken..seealkkalakngPvsvaidaseedfqlYksG.................vyketecsstelnhavlivGygven...........gkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                 y+ +   +v+++dypYk      +  +  ++C+++  +  +k       va++ g++ v+     e  ++ a++kngP+s+a++a+ +  ++Y +G                 + +++ c++++l+havl+vG gv++           +++yW++kNSWg+dwGe+GY+r++rg+n +cg+++++v 
   MMETSP1325-20131115|911_1   3 YVET-LALVSDADYPYKgifmdyE--QaiPTCDQEllQ--KKmekdsyDVAHVGGFQFVAMGadYEPLMALAMVKNGPLSIAFNANGM--EYYVHGiigcetiadseyceagsIDDHSPCDPESLDHAVLAVGIGVQEgiqldyssttdSTQYWVIKNSWGSDWGEDGYYRLERGVN-KCGVANMVVH 182
                 5555.678999******7776443..256888887432..33235555677777777777767567778889999************6..9***************999999999999*********************************************************99.******9985 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   1.8e-07    0.0012     372     397 ..     142     167 ..     115     183 .. 0.74

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.8e-07
  PF03051.10 372 ddgkvtkwkvEnsWGedsGekGyfvm 397
                 ++++++ w + nsWG d Ge+Gy+ +
   MMETSP1325-20131115|911_1 142 TTDSTQYWVIKNSWGSDWGEDGYYRL 167
                 2377889****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.54
# Mc/sec: 834.29
//
Query:       MMETSP1325-20131115|913_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-08   33.3   1.4    6.3e-05   22.9   0.1    2.6  2  PF00041.16 Fibronectin type III domain


Domain annotation for each model (and alignments):
>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00013       1.8      60      81 ..      47      68 ..      44      71 .. 0.87
   2 !   22.9   0.1   4.6e-09   6.3e-05       3      40 ..      86     123 ..      84     132 .. 0.92

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00013
                EES--TT-EEEEEEEEEC---- CS
  PF00041.16 60 ltgLkpgteYefrVqavngage 81
                + gL+p t+Y +r q+ n  g 
   MMETSP1325-20131115|913_1 47 VDGLTPFTQYYMRAQTFNVLGA 68
                89***************98765 PP

  == domain 2    score: 22.9 bits;  conditional E-value: 4.6e-09
                 BEEEEEECECSSEEEEEEE-BSHHSSTBSEEEEEEEEE CS
  PF00041.16   3 PenlsvsevtstsltlsWsppkdgggpitgYeveyrek 40 
                 P+++ v++v+ t+l++ +spp++++g+it Y+v++ ++
   MMETSP1325-20131115|913_1  86 PTDIEVEAVSGTQLEVFFSPPTSPSGDITQYTVQWDTD 123
                 99********************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.65
# Mc/sec: 497.70
//
Query:       MMETSP1325-20131115|914_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.46s 00:00:00.70 Elapsed: 00:00:00.59
# Mc/sec: 146.22
//
Query:       MMETSP1325-20131115|915_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.60
# Mc/sec: 263.60
//
Query:       MMETSP1325-20131115|916_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       73  (0.00533938); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.59
# Mc/sec: 345.24
//
Query:       MMETSP1325-20131115|918_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.71
# Mc/sec: 293.64
//
Query:       MMETSP1325-20131115|919_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-33  115.1   3.9      2e-33  115.1   2.7    2.1  2  PF01956.11 Integral membrane protein DUF106


Domain annotation for each model (and alignments):
>> PF01956.11  Integral membrane protein DUF106
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.1   2.7   1.5e-37     2e-33      25     167 ..       2     161 ..       1     162 [. 0.95
   2 ?   -2.6   2.1      0.22     3e+03      40      63 ..     241     264 ..     223     273 .. 0.52

  Alignments for each domain:
  == domain 1    score: 115.1 bits;  conditional E-value: 1.5e-37
  PF01956.11  25 ltgllsellqkllidkk.mekykkrekeiqkrarelqkngdklklkklekrkeelkedqkem.................mmeqmkpnivimipqivifgwlnsffsgfvvaklpfplt.grfksmlqrgv..egldvtfvssiswYflcsfglrqviqklLgea 167
                 +++++ +ll +     +  +k++ ++k+++ ra++l  ng+ ++++++ +r++++ +  k++                 m ++mk n+++m+p++v++  +n+ff+gfv++k+pf  +  rfksmlq+gv  ++ldv++vss+swYfl++fglr++++++ ge+
   MMETSP1325-20131115|919_1   2 VRHHVQQLLESS----NpADKEELKNKQTLMRANKLGMNGGFIPPEAFYMRQAYFINPDKGVlhekvpkasnsmmnpmgMVDMMKRNVTFMLPNMVMMQIINMFFQGFVLVKVPFNTMpNRFKSMLQKGVdlKTLDVSYVSSLSWYFLVMFGLRGLYKLIIGED 161
                 578888888886....347***************************************9999****************************************************9765279***************************************9975 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.22
  PF01956.11  40 kkmekykkrekeiqkrarelqkng 63 
                 ++m++ +++eke++++ +++ k+ 
   MMETSP1325-20131115|919_1 241 QEMAMKRSLEKELKEEKKAVAKQM 264
                 333333333333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       826  (0.0604154); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.54
# Mc/sec: 1215.93
//
Query:       MMETSP1325-20131115|922_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-12   46.4   0.0    2.6e-12   46.3   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
    8.2e-10   38.1   0.0      1e-09   37.8   0.0    1.1  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   3.8e-16   2.6e-12     176     256 ..      40     120 ..      16     123 .. 0.87

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 3.8e-16
                 HHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  PF07714.12 176 slkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekpekcpeelyelmkqCweeepeeRptfkelv 256
                 s +  ++ts+ Dv+s Gv+l+Ei+t+   p+++++ +e++ ++  +++    p ++pe  + l+++Cwe +p +Rp  +e+ 
   MMETSP1325-20131115|922_1  40 SSHGVEYTSACDVYSLGVVLFEILTFE-IPFENMKYSEITLAVgVRRETPVLPPTTPEAYAALVEDCWEIDPLQRPAAHEVA 120
                 555668*******************65.***********99997777778889999********************998876 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   1.5e-13     1e-09     173     254 ..      43     119 ..      21     122 .. 0.79

  Alignments for each domain:
  == domain 1    score: 37.8 bits;  conditional E-value: 1.5e-13
                 SHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHH CS
  PF00069.20 173 akeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeei 254
                 + eyt+++Dv+slGv+l+e+lt + pf++  ++++  l   +++++   +  +    +e    l+++++e dp +R+ a+e+
   MMETSP1325-20131115|922_1  43 GVEYTSACDVYSLGVVLFEILTFEIPFENM-KYSEITLAVGVRRETPVLPPTT----PEAYAALVEDCWEIDPLQRPAAHEV 119
                 678*************************99.4444444444444433333332....3899*****************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.68
# Mc/sec: 542.70
//
Query:       MMETSP1325-20131115|912_1  [L=348]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.74
# Mc/sec: 1126.94
//
Query:       MMETSP1325-20131115|926_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.039   13.5   0.0      0.048   13.3   0.0    1.2  1  PF12914.2 SH3 domain of SH3b2 type


Domain annotation for each model (and alignments):
>> PF12914.2  SH3 domain of SH3b2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.5e-06     0.048      15      33 ..      17      35 ..       6      37 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.5e-06
  PF12914.2 15 lvvikdkvpvydengvflf 33
                v+++d+ +++ ++gvfl 
  MMETSP1325-20131115|926_1 17 NVPLGDYAQTHADPGVFLA 35
               59*********99****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        60  (0.00438853); expected 273.4 (0.02)
Passed bias filter:                       58  (0.00424225); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.61
# Mc/sec: 204.28
//
Query:       MMETSP1325-20131115|925_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.66
# Mc/sec: 777.00
//
Query:       MMETSP1325-20131115|927_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.62
# Mc/sec: 842.59
//
Query:       MMETSP1325-20131115|929_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.64
# Mc/sec: 797.54
//
Query:       MMETSP1325-20131115|930_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 350.90
//
Query:       MMETSP1325-20131115|932_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-18   64.2   0.0    5.4e-18   64.1   0.0    1.0  1  PF03200.11 Mannosyl oligosaccharide glucosidase


Domain annotation for each model (and alignments):
>> PF03200.11  Mannosyl oligosaccharide glucosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.0     4e-22   5.4e-18     710     769 ..       5      67 .]       2      67 .] 0.92

  Alignments for each domain:
  == domain 1    score: 64.1 bits;  conditional E-value: 4e-22
  PF03200.11 710 dapYWrgpiWiniNylilssLkhys...kvdgpykekakeiykeLRsNlvrNvvkqyketGfl 769
                 d pYWrg+iW+ iN+l+l++Lkhy+   + ++   ++a+++y+eLRsNl+r  + ++++tG +
   MMETSP1325-20131115|932_1   5 DEPYWRGAIWMPINFLALRALKHYGahpDAPSAIASQATSLYAELRSNLLRTCIGEWDRTGSI 67 
                 89**********************976666778899*************************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 286.71
//
Query:       MMETSP1325-20131115|928_1  [L=352]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.68
# Mc/sec: 1240.47
//
Query:       MMETSP1325-20131115|933_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.67
# Mc/sec: 561.53
//
Query:       MMETSP1325-20131115|931_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        6.3    5.6  11.9        7.2    5.4   8.2    1.1  1  PF11702.3  Protein of unknown function (DUF3295)


Domain annotation for each model (and alignments):
>> PF11702.3  Protein of unknown function (DUF3295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   8.2   0.00053       7.2      84     197 ..       5     117 ..       1     162 [. 0.69

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.00053
  PF11702.3  84 pnlap.rseettPkvssses.tatrtpdlaqqalestesssteaadaneseqssaenlnasktstssseilpktsvvrGFspssissstrstaklnkspsptisestaaaqaklel 197
                p+ ap ++ + +P +s+se+ +a   p+++  +    ++s t+a++ ++ ++s a+++   +++ ++  + p t v  GF+p   s+   + +k ++sp p ++++t+a++a + +
  MMETSP1325-20131115|931_1   5 PTPAPaPAPTAVPISSPSEQpSAGPYPQPTDAPTFAPSVSRTSAPTNSTDAPSFAPSAVPTNSTPTMPTVSP-TWVFTGFEPVT-STPSPAPPKSQPSPGP-VPFPTHAPTALPDA 117
                444553456777887777762556678888888888888889998888888888888888888888888777.9*******963.5555556655566666.69998888766544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.61
# Mc/sec: 797.48
//
Query:       MMETSP1325-20131115|937_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-15   54.7   0.0    7.5e-15   54.5   0.0    1.1  1  PF00439.20 Bromodomain


Domain annotation for each model (and alignments):
>> PF00439.20  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   5.5e-19   7.5e-15       2      84 .]      19     101 ..      18     101 .. 0.94

  Alignments for each domain:
  == domain 1    score: 54.5 bits;  conditional E-value: 5.5e-19
  PF00439.20   2 eqilndlqehklastFsapvdakeapdYydiikrPidLktIqkkl.asgkyqslaqfekdlelvfsNavkyneegsdvyedare 84 
                 e ++n++ +++ a +F +p  ++++ +Y ++i +PidL tI +    +++y+  + f+ d+ l++ Na ++n++++ + ++a+e
   MMETSP1325-20131115|937_1  19 ESVVNKVWSRPQAFWFHKP-VPANVLGYKEKIAKPIDLGTILRQTtVQYTYRERTTFLDDVDLMYRNAETFNGPDHAITKEAKE 101
                 6799**************9.688899***************88776999*******************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.56
# Mc/sec: 436.48
//
Query:       MMETSP1325-20131115|936_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       833  (0.0609274); expected 273.4 (0.02)
Passed bias filter:                      510  (0.0373025); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.61
# Mc/sec: 373.20
//
Query:       MMETSP1325-20131115|939_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-40  137.3   0.0    5.7e-40  136.8   0.0    1.3  1  PF00300.17 Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.8   0.0   4.2e-44   5.7e-40       1     158 []      32     218 ..      32     218 .. 0.97

  Alignments for each domain:
  == domain 1    score: 136.8 bits;  conditional E-value: 4.2e-44
                 EEEEEE---BHCCCTTBGGGTCC--B-----HHHHHHHTHHHHTTHCESEEEEESSHHHHHHHHHHCCCCE...EEEEE.GGGSHHHH----TTCHHHHHHHHHCHHHHHHHHCCTSTTT.........................SS.CHHHHHHHHHHHHHHHHH.HCTTTSEEEEEE-TTHHHHH CS
  PF00300.17   1 rlylvRHGeselnkegrlqgwsdvpLtekGreqarelgkkLkradlqidavytSplkRaiqTaeilleeld...ipiiqeprLrerdfgeweglpkaevkeelpeeyekwkrdkkefrpp.........................egesladvyeRvapfleelie.akdkgenvlivsHggvlral 158
                 +++l+RHGes++n e++++gw d +L+ekG+e+a e g+ L++++ ++d +ytS+lkRai T+   lee d   ip+i+ ++L+er++g + gl+k+e+ +++++++  ++r+++++ pp                          +esl+ +++Rv p++e+ i    ++g+nvli +Hg++lral
   MMETSP1325-20131115|939_1  32 TVVLMRHGESVWNMENKFTGWYDIQLSEKGHEEAAEGGALLAEEGFKFDIAYTSTLKRAIRTCYHALEETDclwIPTIKAWELNERHYGGLTGLDKQETVDKYGKDQVLIWRRSFDIPPPdvettsehfpgndpkyaaidksllpTAESLKTTADRVLPYWENEIVpTIKSGKNVLIAAHGNSLRAL 218
                 589********************99****************************************888888999**************8899*****************************************************999**************99999******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.65
# Mc/sec: 1047.02
//
Query:       MMETSP1325-20131115|941_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       527  (0.0385459); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.59
# Mc/sec: 523.95
//
Query:       MMETSP1325-20131115|935_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.1e-08   32.2  19.0    4.1e-05   23.5   0.6    2.7  3  PF06549.7 Protein of unknown function (DUF1118)
  ------ inclusion threshold ------
        4.3    5.7   8.3        6.4    5.2   5.8    1.2  1  PF04625.8 DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF06549.7  Protein of unknown function (DUF1118)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.29     2e+03      92     103 ..      15      26 ..       6      45 .. 0.59
   2 !   23.5   0.6   6.1e-09   4.1e-05       3      48 ..      57     100 ..      55     116 .. 0.79
   3 !   16.2   5.1   1.1e-06    0.0075      43     109 ..     118     185 ..     112     188 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.29
  PF06549.7  92 alalvvggsall 103
                 l+++v+++a++
  MMETSP1325-20131115|935_1  15 TLVALVSSAAAF 26 
                333333333332 PP

  == domain 2    score: 23.5 bits;  conditional E-value: 6.1e-09
  PF06549.7   3 ekrkvLskvekagLLskaeelGltLssiekLgllskaedlglLsll 48 
                  +++Ls+v + g+Lskae +G+tLs +e L  l  a++ g + ll
  MMETSP1325-20131115|935_1  57 QEKQLLSQVAELGVLSKAEAAGITLSDLEPL--LVAADENGAMQLL 100
                6799*************************87..4556665555555 PP

  == domain 3    score: 16.2 bits;  conditional E-value: 1.1e-06
  PF06549.7  43 glLsllenaaaasPgaLasvaLpllvaaiaavvlvpddsaalvavqavvalal.vvggsallvgsvvl 109
                glL ++ +  ++ P aL+++a +   aa  av ++pdds   va+q+ +a +l ++  +a lvg +vl
  MMETSP1325-20131115|935_1 118 GLLPVAGALLSVPPPALFAAAPASAFAAYTAVQVIPDDSIGAVALQTFLAILLgAIIPAASLVGGAVL 185
                7888888999999************************************9876355566667776665 PP

>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   5.8   0.00093       6.4      97     171 ..     114     184 ..      94     188 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.00093
  PF04625.8  97 palpgllgaaapv.papapaaaaapaaasapaadspaasvpdaaqpailgqaalqnaftflnpsnfdassllgqsv 171
                 a pgll  a  +   p pa   a a asa aa +    +pd +    +g  alq  +++l  + + a+sl+g +v
  MMETSP1325-20131115|935_1 114 EAAPGLLPVAGALlSVPPPAL-FAAAPASAFAAYTAVQVIPDDS----IGAVALQTFLAILLGAIIPAASLVGGAV 184
                235666654433303333333.2334456666777777777765....6888999999999999999999999776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.79
# Mc/sec: 573.31
//
Query:       MMETSP1325-20131115|942_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.4   0.0         17    5.4   0.0    2.1  2  PF12912.2 NLPC_P60 stabilising domain, N term


Domain annotation for each model (and alignments):
>> PF12912.2  NLPC_P60 stabilising domain, N term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0014        19       2      26 ..      14      38 ..      13      66 .. 0.80
   2 ?    5.4   0.0    0.0012        17      56      96 ..      97     137 ..      83     145 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0014
  PF12912.2  2 lflllallllaaCstkevkekpkkq 26
               l+l+l+l+ ++aCs   +++k++++
  MMETSP1325-20131115|942_1 14 LALILSLVAAFACSGSAFVPKAPTP 38
               7899*************99987644 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0012
  PF12912.2  56 dqaeqealkeeykkrfFaPWhstkpsvkkkdvfwsfskykk 96 
                d  + +a +++++ r+ ++Wh ++  ++++d + +++++++
  MMETSP1325-20131115|942_1  97 DLVTSAAGADQIRLRRWQVWHVRESGERAQDEAVQIRSAEE 137
                55667778889999*****************9999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 664.25
//
Query:       MMETSP1325-20131115|943_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 336.33
//
Query:       MMETSP1325-20131115|940_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.69
# Mc/sec: 670.29
//
Query:       MMETSP1325-20131115|944_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   14.6   0.9      0.015   14.6   0.6    1.8  2  PF06565.7 Repeat of unknown function (DUF1126)
      0.069   12.0   0.1      0.092   11.5   0.1    1.1  1  PF03415.9 Clostripain family


Domain annotation for each model (and alignments):
>> PF06565.7  Repeat of unknown function (DUF1126)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.6   2.2e-06     0.015      20      32 ..       2      14 ..       1      15 [. 0.94
   2 ?   -3.4   0.4      0.96   6.5e+03       6      11 ..      84      89 ..      84      89 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2.2e-06
               --------EEEEE CS
  PF06565.7 20 NSGrpgGkfLrRq 32
               NSG++gG fLrR+
  MMETSP1325-20131115|944_1  2 NSGIVGGNFLRRG 14
               ************8 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 0.96
               TTTTEE CS
  PF06565.7  6 LaDDTi 11
               L DD+i
  MMETSP1325-20131115|944_1 84 LDDDSI 89
               78**98 PP

>> PF03415.9  Clostripain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   1.3e-05     0.092      79     149 ..      50     119 ..      45     122 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.3e-05
  PF03415.9  79 daavLkkfleyikenyeadsyllilwdHGdawredsn.kstraicfDesngkdrlelpelsdaLesgesvdl 149
                d+a+L k++e  +e ++ +sy+l++ + G+ +++  +  s    c   s+++  l++  l++ L    +vd+
  MMETSP1325-20131115|944_1  50 DDATL-KYMERKEESFPHSSYALVMNNWGSSMQGALDdDSIYKACAEASEDGAYLAMDGLKSLLA-MYQVDF 119
                56666.699***********************99988888888899999999********99998.555665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.66
# Mc/sec: 544.63
//
Query:       MMETSP1325-20131115|946_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-17   62.9   0.9    2.4e-17   62.2   0.1    1.6  2  PF00226.26 DnaJ domain
     0.0091   15.3   0.0      0.013   14.8   0.0    1.3  1  PF11833.3  Protein of unknown function (DUF3353)


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.27   1.8e+03      20      22 ..      19      21 ..      11      36 .. 0.57
   2 !   62.2   0.1   3.6e-21   2.4e-17       2      47 ..      42      85 ..      41      86 .] 0.97

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.27
                HHH CS
  PF00226.26 20 aYr 22
                aYr
   MMETSP1325-20131115|946_1 19 AYR 21
                443 PP

  == domain 2    score: 62.2 bits;  conditional E-value: 3.6e-21
                HHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHH CS
  PF00226.26  2 yYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekfkei 47
                yY++L+v+k+as++eIk+aY+klalk+HPDkn  ++  ae +fk++
   MMETSP1325-20131115|946_1 42 YYDVLKVEKGASEDEIKRAYKKLALKLHPDKNTAPS--AENAFKMV 85
                9***********************************..*****987 PP

>> PF11833.3  Protein of unknown function (DUF3353)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.9e-06     0.013       2      37 ..      50      85 ..      49      86 .] 0.95

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.9e-06
  PF11833.3  2 edAsfeeiqsArnrllaeyagDeqarakiEaAYDai 37
               ++As++ei++A ++l  ++  D+++  + E A+ ++
  MMETSP1325-20131115|946_1 50 KGASEDEIKRAYKKLALKLHPDKNTAPSAENAFKMV 85
               79******************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       506  (0.0370099); expected 273.4 (0.02)
Passed bias filter:                      443  (0.032402); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.69
# Mc/sec: 298.68
//
Query:       MMETSP1325-20131115|945_1  [L=333]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-11   41.7  13.5    3.6e-06   25.8   2.4    2.3  2  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
       0.67    9.7   6.1        7.4    6.3   4.3    2.2  1  PF12773.2  Double zinc ribbon
       0.94    9.0   7.5        2.6    7.6   5.2    1.7  1  PF10097.4  Predicted membrane protein (DUF2335)


Domain annotation for each model (and alignments):
>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   1.7     2e-08   9.2e-05       5      28 ..     214     237 ..     212     239 .. 0.93
   2 !   25.8   2.4   7.8e-10   3.6e-06       4      29 ..     300     325 ..     298     326 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 2e-08
  PF00641.13   5 WdCskClvqNfawstkCvaCqapk 28 
                 W+C  C++ N+a s++C +C+a +
   MMETSP1325-20131115|945_1 214 WNCALCTFANEAASVECAICGARR 237
                 *********************976 PP

  == domain 2    score: 25.8 bits;  conditional E-value: 7.8e-10
  PF00641.13   4 dWdCskClvqNfawstkCvaCqapkp 29 
                  W Cs+C++ N+a + +CvaC ++++
   MMETSP1325-20131115|945_1 300 EWACSVCTLVNSAQAERCVACRSLRS 325
                 6********************99986 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   4.3    0.0016       7.4       1      49 [.     216     320 ..     216     327 .. 0.92

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0016
  PF12773.2   1 CpqCgaenpsgarfCpqCgaklk..........................................................eataeevlCpsCgesvspkarfCpnC 49 
                C+ C  +n++ +  C  Cga+ +                                                          +a  +e +C+ C   +s++a+ C  C
  MMETSP1325-20131115|945_1 216 CALCTFANEAASVECAICGARRRssqtagsagqdgnaasavappppppaslplppppppaastsmpvvssaelgfegtrglAA--TEWACSVCTLVNSAQAERCVAC 320
                999*******************99****************************************************9996433..4589999999999999999999 PP

>> PF10097.4  Predicted membrane protein (DUF2335)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.2   0.00057       2.6      21      50 .]     157     186 ..     157     186 .. 0.98

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00057
  PF10097.4  21 iaMaekEqehRheleekllkleqkrrklgq 50 
                i++ae++q  ++e+e+ + + eq+ +k+gq
  MMETSP1325-20131115|945_1 157 IRQAEAQQREQQEYEQWQREEEQRLAKVGQ 186
                79**************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       930  (0.0680222); expected 273.4 (0.02)
Passed bias filter:                      533  (0.0389848); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.40s 00:00:01.20 Elapsed: 00:00:00.86
# Mc/sec: 927.89
//
Query:       MMETSP1325-20131115|949_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.66
# Mc/sec: 243.27
//
Query:       MMETSP1325-20131115|950_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.31s 00:00:00.93 Elapsed: 00:00:00.62
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|951_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-35  121.1   0.0    5.2e-35  120.8   0.0    1.0  1  PF03055.10 Retinal pigment epithelial membrane protein


Domain annotation for each model (and alignments):
>> PF03055.10  Retinal pigment epithelial membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.8   0.0   3.8e-39   5.2e-35     354     485 ..       6     141 ..       2     142 .. 0.89

  Alignments for each domain:
  == domain 1    score: 120.8 bits;  conditional E-value: 3.8e-39
  PF03055.10 354 teevlddraalEfPrineryvgrkyryvYlaavsseakestkfdglvkldletge.akvwslgpghyasEpiFVPrpda.....keEddGyllsvvldedterseLlvldAkdmtegpvarvelpqrvpyGlHGnwvp 485
                 +++ l+dr  l+fP++n+r+++ ++ryv+++ +  +a+  ++++g++k+d+++ + ++vw  +p+ +++E++F Pr ++     ++EddGy++s++ ++ t++s L+vldA d+++gp+a+v +  ++p+GlHG+wvp
   MMETSP1325-20131115|951_1   6 SKARLSDRY-LDFPVVNRRVSCAEHRYVWAS-TGCSAEGVAPIQGFIKIDTTDPSaEQVWLPEPHEFVGEATFAPRAGKeddpsTAEDDGYIVSLMTNGITQESSLIVLDAADIAKGPIAKVPVGVNMPHGLHGCWVP 141
                 677888986.*******************55.4555555789*********9977699*****************88554446789***************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.69
# Mc/sec: 642.50
//
Query:       MMETSP1325-20131115|953_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-21   74.2   0.0    6.2e-21   73.8   0.0    1.2  1  PF01521.15 Iron-sulphur cluster biosynthesis


Domain annotation for each model (and alignments):
>> PF01521.15  Iron-sulphur cluster biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.0   4.5e-25   6.2e-21       3      90 ..      92     179 ..      90     181 .. 0.94

  Alignments for each domain:
  == domain 1    score: 73.8 bits;  conditional E-value: 4.5e-25
  PF01521.15   3 lteaAakklkelleleeeekalRlgVkygGcsGfsyglkle.neaeeddevleqdgvtvvvdekslpylegveldfveelegsgfkfsn 90 
                 +t + a+++k+l  +++  k lR+ V+ gGcsGf+y ++l+ + +++dd v+e dg +vv+de sl++++g+++d+vee+  s+f + n
   MMETSP1325-20131115|953_1  92 VTRSCAQRIKQLQGETPDLK-LRISVDGGGCSGFQYVFDLDgEPIGADDCVFERDGAQVVIDEASLEFVKGATVDYVEEMIRSSFAVIN 179
                 7889999***9999999988.********************999***************************************998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 982.51
//
Query:       MMETSP1325-20131115|947_1  [L=1113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-90  301.1   0.0    1.1e-76  257.7   0.0    2.2  2  PF02138.13 Beige/BEACH domain
    1.2e-06   28.0   1.1          2    8.3   0.0    4.8  4  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF02138.13  Beige/BEACH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.0   1.6e-14   1.1e-10      16      48 ..       1      34 [.       1      48 [. 0.85
   2 !  257.7   0.0   1.6e-80   1.1e-76      46     270 .]      70     303 ..      66     303 .. 0.97

  Alignments for each domain:
  == domain 1    score: 41.3 bits;  conditional E-value: 1.6e-14
                HHHHHH----SS-GGG---B---B---SSS.S-- CS
  PF02138.13 16 mlLNilagRsfndlsqYpvfPwvlsdykse.eld 48
                m +N+lagRsfndl+qYpvfPwvl+dy+++  +d
   MMETSP1325-20131115|947_1  1 MTINTLAGRSFNDLTQYPVFPWVLKDYRTKrPID 34
                789************************8763445 PP

  == domain 2    score: 257.7 bits;  conditional E-value: 1.6e-80
                 S--TT-GGGB--TTS-----SHHHHHHHHHHHHH.--SSS----B---S--H.HHHHHHTTTSTTHHHHHHHH-------TTTSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS-TT------...----SS-B--TT-SSHHHHHHHHHHHHHSHHHHTTHHHHHHHH--------HHHHTT--B-GGG-----....--SHHHHHHHHHHHHH---------SS----- CS
  PF02138.13  46 eldlsdkkkfRdLskpigalneerlkklkeklke.leeaekpflysshyssp.ltvlsylvrlePftslaielqsgkfdeadrlfssieealesvleskndvkEliPEffylpeflknkneldlgk...gekvedvelPkwakspeeFvylnrkaLEsdyvsenLneWIDliFGykqrgkeaveaknvfkplvyeeav....ikdeeereaieallknfGqvpkqlFtepHpkr 270
                 eldl+d++++RdLskp+galn +rl+ +++++++  +   ++f+y+shys++ ++v++yl+rlePf+sl+ elq+g+fd++drlf+s+e++++   e  ++vkEl+PE +++pefl+n n++dlg    ge+v dv lP wa spe+F+  +r aLEs++v+++L+eWIDliFG+kqrg +avea+nvf++l+y+++v    i+d+e+r a+e ++ +fGq+p qlF +pHp+r
   MMETSP1325-20131115|947_1  70 ELDLTDPTIYRDLSKPMGALNADRLTTFTNRYESfCDPYIPSFMYGSHYSTAaGVVMHYLMRLEPFASLHKELQGGSFDVPDRLFKSVEDSWTLNAEAGMEVKELTPEWYTTPEFLRNGNKFDLGVtqaGERVGDVVLPYWARSPEHFIATHRAALESEFVTNHLHEWIDLIFGHKQRGPAAVEANNVFYYLTYHGSVdlsaIEDREMRLATEMQIAHFGQCPMQLFLRPHPPR 303
                 79********************************888888**********6516789*************************************999****************************99*************************************************************************9999999*************************97 PP

>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00029         2      23      38 ..     754     769 ..     717     770 .. 0.84
   2 !    5.1   0.0     0.003        20       4      30 ..     786     812 ..     783     818 .. 0.78
   3 ?    2.6   0.0     0.018   1.3e+02      12      33 ..     953     974 ..     952     975 .. 0.90
   4 !    6.5   0.0     0.001         7       8      37 ..    1005    1037 ..    1001    1037 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00029
                 STEEEEEETTSEEEEE CS
  PF00400.27  23 gpllasgSrDgtirlW 38 
                   +++sgS Dg + lW
   MMETSP1325-20131115|947_1 754 EEIVLSGSTDGLVMLW 769
                 7899************ PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.003
                 EEEEESSSSSEEEEEEESSSTEEEEEE CS
  PF00400.27   4 katlrgHtspVtcvafspdgpllasgS 30 
                  ++lrgH +pV+c a++ +  + +++S
   MMETSP1325-20131115|947_1 786 WRVLRGHDAPVRCGAVCVELGVAVTCS 812
                 589**********87777766666666 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.018
                 SSEEEEEEESSSTEEEEEETTS CS
  PF00400.27  12 spVtcvafspdgpllasgSrDg 33 
                 + V+++af  ++++la + +Dg
   MMETSP1325-20131115|947_1 953 GDVSSLAFVAHSHVLAVARADG 974
                 579**************98887 PP

  == domain 4    score: 6.5 bits;  conditional E-value: 0.001
                  ESSSSSEEEEEEESS...STEEEEEETTSEEEE CS
  PF00400.27    8 rgHtspVtcvafspd...gpllasgSrDgtirl 37  
                   g t+  tc++ +p+   + l+++g + gt+rl
   MMETSP1325-20131115|947_1 1005 NGNTNRLTCMSLCPSldcPALIVTGDEAGTVRL 1037
                  7999**********************99**997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.45u 0.43s 00:00:01.88 Elapsed: 00:00:01.02
# Mc/sec: 2614.85
//
Query:       MMETSP1325-20131115|955_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-06   25.4   0.1    3.2e-06   25.3   0.0    1.0  1  PF06101.6 Plant protein of unknown function (DUF946)


Domain annotation for each model (and alignments):
>> PF06101.6  Plant protein of unknown function (DUF946)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   2.3e-10   3.2e-06      98     157 ..      34      91 ..      16     108 .. 0.84

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 2.3e-10
  PF06101.6  98 palkkPldytlvlstkslkeeeeseagyfWlPvppd.GykavGlvvttspekPeldevrCv 157
                + l +P+ y++v++t  +++++   + y W+Pvpp+  + a+G+v  ++++ P++  vrCv
  MMETSP1325-20131115|955_1  34 EILPNPVRYKQVWNTVGKRTDK---HFYAWMPVPPSpEFVALGMVGSSDEDPPPVTAVRCV 91 
                56889*********99544443...67*******97469*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.69
# Mc/sec: 406.34
//
Query:       MMETSP1325-20131115|957_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 776.42
//
Query:       MMETSP1325-20131115|959_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.43s 00:00:00.71 Elapsed: 00:00:00.62
# Mc/sec: 154.60
//
Query:       MMETSP1325-20131115|958_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 224.89
//
Query:       MMETSP1325-20131115|954_1  [L=683]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-33  113.9   0.5    5.2e-14   52.2   0.0    2.4  3  PF12796.2  Ankyrin repeats (3 copies)
    6.2e-22   76.1   0.7    2.2e-06   27.0   0.0    3.6  3  PF00023.25 Ankyrin repeat
    1.6e-20   72.9   4.6    1.2e-10   41.4   0.0    3.3  4  PF13637.1  Ankyrin repeats (many copies)
    5.1e-19   67.7   4.7    9.5e-08   31.9   0.1    3.6  3  PF13857.1  Ankyrin repeats (many copies)
    1.1e-17   62.1   0.2    5.2e-05   22.9   0.0    4.2  4  PF13606.1  Ankyrin repeat
    2.3e-09   36.8   1.1      5e-09   35.7   0.7    1.6  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.0   2.3e-17   5.2e-14       2      89 .]     367     458 ..     366     458 .. 0.88
   2 !   50.1   0.0     1e-16   2.3e-13      15      87 ..     413     489 ..     413     491 .. 0.95
   3 !   25.1   0.0   6.3e-09   1.4e-05      19      64 ..     456     499 ..     452     505 .. 0.81

  Alignments for each domain:
  == domain 1    score: 52.2 bits;  conditional E-value: 2.3e-17
  PF12796.2   2 hlAaengnlelvklLlekg..advdl..getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89 
                + A++ g+l+ +++L+ +g  a++     +tpLh+Aa +g+ +++ lL+++ ad++++d  gntpLh+ +  g++ ++ +Lle+ a v++++
  MMETSP1325-20131115|954_1 367 FDAVMAGKLSDAEQLILSGtaASCVDeqMRTPLHYAAYNGDRDMAALLCDYTADIETRDSAGNTPLHVSAARGSTRTLVFLLEYAAMVDVQN 458
                6699999999999999888553333257899*****************************************************99988875 PP

  == domain 2    score: 50.1 bits;  conditional E-value: 1e-16
  PF12796.2  15 lLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87 
                lL++  ad+++    g+tpLh+ a++g++ ++ +Lle+ a v+ +++ g tpLhlA+ +g++++v+ Ll++ + v+ 
  MMETSP1325-20131115|954_1 413 LLCDYTADIETrdsaGNTPLHVSAARGSTRTLVFLLEYAAMVDVQNDVGDTPLHLAAWFGNQDCVRHLLDYSSPVDM 489
                689999****9999*********************************************************988876 PP

  == domain 3    score: 25.1 bits;  conditional E-value: 6.3e-09
  PF12796.2  19 kgadvdlgetpLhlAaeagnleivklLleagadvnakdkegntpLh 64 
                 ++dv   +tpLhlAa+ gn ++v+ Ll++   v+ ++++g  + h
  MMETSP1325-20131115|954_1 456 VQNDVG--DTPLHLAAWFGNQDCVRHLLDYSSPVDMTNAYGLDAYH 499
                455666..99999999999999999999999999999988888877 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   6.8e-09   1.6e-05       3      32 ..     396     425 ..     394     426 .. 0.94
   2 !   21.3   0.0     6e-08   0.00014       2      33 .]     428     459 ..     427     459 .. 0.97
   3 !   27.0   0.0   9.5e-10   2.2e-06       2      32 ..     461     491 ..     460     492 .. 0.94

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 6.8e-09
                 CBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   3 fTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 +TPLH+Aa++g+ +++ lL ++ Ad+  +d
   MMETSP1325-20131115|954_1 396 RTPLHYAAYNGDRDMAALLCDYTADIETRD 425
                 7************************98887 PP

  == domain 2    score: 21.3 bits;  conditional E-value: 6e-08
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 G+TPLH+ a rg+++ + +Ll++ A +++q+d
   MMETSP1325-20131115|954_1 428 GNTPLHVSAARGSTRTLVFLLEYAAMVDVQND 459
                 9*****************************97 PP

  == domain 3    score: 27.0 bits;  conditional E-value: 9.5e-10
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G+TPLHlAa  gn ++v+ Ll++   +++++
   MMETSP1325-20131115|954_1 461 GDTPLHLAAWFGNQDCVRHLLDYSSPVDMTN 491
                 99********************999998877 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   2.5e-07   0.00057       2      53 ..     363     414 ..     362     415 .. 0.92
   2 !   41.4   0.0   5.3e-14   1.2e-10       2      54 .]     396     448 ..     395     448 .. 0.97
   3 !   17.3   0.0     2e-06    0.0046      10      50 ..     437     477 ..     436     478 .. 0.90
   4 !   18.1   0.1   1.1e-06    0.0026       2      39 ..     462     499 ..     461     504 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 2.5e-07
  PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                +++L+ a+++g l  ++ L+ +g    ++de+ +t+Lh+Aa++g+ +++ lL
  MMETSP1325-20131115|954_1 363 NQLLFDAVMAGKLSDAEQLILSGTAASCVDEQMRTPLHYAAYNGDRDMAALL 414
                789999******9999999999988899********************9998 PP

  == domain 2    score: 41.4 bits;  conditional E-value: 5.3e-14
  PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                +t+Lhyaa+ g+ ++++lL+++ +di  +d+ Gnt+Lh+ a rg  + l +Ll
  MMETSP1325-20131115|954_1 396 RTPLHYAAYNGDRDMAALLCDYTADIETRDSAGNTPLHVSAARGSTRTLVFLL 448
                79***********************************************9997 PP

  == domain 3    score: 17.3 bits;  conditional E-value: 2e-06
  PF13637.1  10 isgrlelvklLlekgidinrtdesGntaLhiAalrgnieil 50 
                + g ++++ +Lle+ + ++ +++ G+t+Lh+Aa++gn +++
  MMETSP1325-20131115|954_1 437 ARGSTRTLVFLLEYAAMVDVQNDVGDTPLHLAAWFGNQDCV 477
                679999*********999***999************97776 PP

  == domain 4    score: 18.1 bits;  conditional E-value: 1.1e-06
  PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLh 39 
                 t+Lh aa +g+ ++v++Ll++   +++t+++G  a h
  MMETSP1325-20131115|954_1 462 DTPLHLAAWFGNQDCVRHLLDYSSPVDMTNAYGLDAYH 499
                79*******************************87755 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.1   4.2e-11   9.5e-08      12      55 ..     391     434 ..     383     435 .. 0.90
   2 !   23.4   0.0   1.9e-08   4.4e-05       8      53 ..     420     465 ..     419     465 .. 0.95
   3 !   29.6   0.2   2.1e-10   4.8e-07      13      54 ..     459     499 ..     447     501 .. 0.83

  Alignments for each domain:
  == domain 1    score: 31.9 bits;  conditional E-value: 4.2e-11
  PF13857.1  12 tdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldl 55 
                 de+ +tpLh+Aa++g+ +++ lL+++ ad+ +rds g+t+l++
  MMETSP1325-20131115|954_1 391 VDEQMRTPLHYAAYNGDRDMAALLCDYTADIETRDSAGNTPLHV 434
                566667************************************85 PP

  == domain 2    score: 23.4 bits;  conditional E-value: 1.9e-08
  PF13857.1   8 dvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53 
                d+ ++d +gntpLh+ a +g++  + +Ll++ a  ++++  g+t+l
  MMETSP1325-20131115|954_1 420 DIETRDSAGNTPLHVSAARGSTRTLVFLLEYAAMVDVQNDVGDTPL 465
                67789****************************************8 PP

  == domain 3    score: 29.6 bits;  conditional E-value: 2.1e-10
  PF13857.1  13 deggntpLhlAakggalevvrlLlapgadlnlrdsdgltald 54 
                d  g tpLhlAa+ g++++vr Ll++ +  ++++++gl a++
  MMETSP1325-20131115|954_1 459 DV-GDTPLHLAAWFGNQDCVRHLLDYSSPVDMTNAYGLDAYH 499
                33.34********************************99986 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.4   3.3e+03       3      25 ..     363     385 ..     361     388 .. 0.85
   2 !   22.9   0.0   2.3e-08   5.2e-05       3      29 ..     396     422 ..     394     423 .. 0.94
   3 !   14.4   0.0   1.3e-05     0.031       2      24 ..     428     450 ..     427     457 .. 0.89
   4 !   19.6   0.0   2.8e-07   0.00063       2      28 ..     461     487 ..     460     489 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.4
  PF13606.1   3 nTpLhlAasngrielveaLleng 25 
                n +L+ A+  g+++ +e L+ +g
  MMETSP1325-20131115|954_1 363 NQLLFDAVMAGKLSDAEQLILSG 385
                678999*******9999999766 PP

  == domain 2    score: 22.9 bits;  conditional E-value: 2.3e-08
  PF13606.1   3 nTpLhlAasngrielveaLlengadin 29 
                +TpLh+Aa+ng  +++ +L+++ adi 
  MMETSP1325-20131115|954_1 396 RTPLHYAAYNGDRDMAALLCDYTADIE 422
                8************************96 PP

  == domain 3    score: 14.4 bits;  conditional E-value: 1.3e-05
  PF13606.1   2 GnTpLhlAasngrielveaLlen 24 
                GnTpLh+ a +g++  + +Lle+
  MMETSP1325-20131115|954_1 428 GNTPLHVSAARGSTRTLVFLLEY 450
                9*********************8 PP

  == domain 4    score: 19.6 bits;  conditional E-value: 2.8e-07
  PF13606.1   2 GnTpLhlAasngrielveaLlengadi 28 
                G+TpLhlAa +g+ + v++Ll++   +
  MMETSP1325-20131115|954_1 461 GDTPLHLAAWFGNQDCVRHLLDYSSPV 487
                99*******************986555 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.7   2.2e-12     5e-09       5      31 .]     203     228 ..     200     228 .. 0.91

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 2.2e-12
                 EEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   5 WeersddddGrvYYyNheTgetqWekP 31 
                 W+++ ++d G +YYyN+eT e+qWe P
   MMETSP1325-20131115|954_1 203 WVACETED-GATYYYNTETDESQWEMP 228
                 *9888788.****************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (683 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.02u 0.34s 00:00:01.36 Elapsed: 00:00:00.78
# Mc/sec: 2098.35
//
Query:       MMETSP1325-20131115|963_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   14.8   0.2      0.022   14.5   0.1    1.1  1  PF04153.13 NOT2 / NOT3 / NOT5 family


Domain annotation for each model (and alignments):
>> PF04153.13  NOT2 / NOT3 / NOT5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   1.6e-06     0.022       1      49 [.      61      99 ..      61     103 .] 0.74

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.6e-06
  PF04153.13  1 leaslasppqesdaaerereykipesyketpssfpqepqplllsseekf 49
                l++++asp+++ ++ ++e++y++p +y+       q+++pl   +++ +
   MMETSP1325-20131115|963_1 61 LYSTFASPWSDGPS-KSEPQYQLPLCYY------MQQTPPL---KHAHL 99
                6899*******888.9***********9......3333355...44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 404.63
//
Query:       MMETSP1325-20131115|961_1  [L=573]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-96  321.9   0.0    2.3e-68  229.9   0.0    2.2  2  PF00217.14 ATP:guanido phosphotransferase, C-terminal catalytic domain
    2.3e-17   62.7   0.8    2.3e-12   46.7   0.0    2.4  2  PF02807.10 ATP:guanido phosphotransferase, N-terminal domain
  ------ inclusion threshold ------
       0.03   13.9   3.7        4.3    7.1   0.2    2.7  2  PF02493.15 MORN repeat
       0.13   11.8   0.5         22    4.7   0.0    2.6  2  PF00880.13 Nebulin repeat


Domain annotation for each model (and alignments):
>> PF00217.14  ATP:guanido phosphotransferase, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.9   0.0   6.9e-72   2.3e-68       8     242 ..      57     316 ..      54     317 .. 0.97
   2 !   89.9   0.0   3.9e-29   1.3e-25       8     123 ..     438     573 .]     435     573 .] 0.96

  Alignments for each domain:
  == domain 1    score: 229.9 bits;  conditional E-value: 6.9e-72
                 EEEEEEE---B-----TTT--HHHHHHHHHHHHHHHHT-..-GGG---B--CCC................S-HHHHHHHHHTTSS---..-SHHHHCTTTTTTTTTT---EE-TTSSEEEEESSSSSEEEEEEE----HHHHHHHHHHHHHHHH..TTS-BS--S------SSGGG-----EEEEEEE-TTCGCSH..TTHHHHHHHTTEEEE------S-.-GGGEEEEEES--SSS-HHHHHHHHH---HHHHHHHHH CS
  PF00217.14   8 lssrirlaRnlkglpfppklskeereeveekvkkalesl..egelkgkyyplke................lseeeeeqliedhllfkk..vdrllsaaglardwpegrgilvnedktflvwvNeeDHlriismqkggdlkevykrlsraldele..eklefafseklGyltscPtnlGTglrasvhiklpkLskek..eklkeilkklglqvRGiygegse.avggiydiSNqrrLGlsEeeivqdlidgvkklielEke 242
                 ls+r+r++Rnl ++p+p  ++k++r ++e+++ ka++ l  + +  g++y+l+                 +s+++ ++l++ h++fk+   d++l++ag+a+dwp grg++ + d+ f++w  eeD+lri++m kg++l++v++rl++ald +e  ++++fa s k+Gy+tscP+nlGTg+rasvh+k+p+L+ +    + k+++k lgl vRG++ge++    +g++d+S+++rL ++E+ei+++l++g+k l e+E++
   MMETSP1325-20131115|961_1  57 LSMRVRVGRNLTSFPLPGLMTKADRINFEKTMLKAFDVLksDPKYGGTVYSLTPdaawkevtgqaknpnlMSDAKYKELVKAHVMFKDmdADPYLKSAGIASDWPCGRGCYRSADGGFIIWFGEEDQLRIMCMAKGFKLNDVFDRLHTALDSVEsiDGIQFATSGKYGYVTSCPSNLGTGMRASVHVKVPNLTSDGteTQAKAAAKPLGLSVRGVGGEHTPiGADGTIDLSPSKRLFITEAEIITKLYNGIKLLKEKEDA 316
                 79*************************************6555666*******99*********************************999***************************************************************999**************************************888999********************899*********************************986 PP

  == domain 2    score: 89.9 bits;  conditional E-value: 3.9e-29
                 EEEEEEE---B-----TTT--HHHHHHHHHHHHHHHHT-..-GGG---B--CCC................S-HHHHHHHHHTTSS---..-SHHHHCTTTTTTTTTT---EE-TTSSEEEEESSSSSEEEEEEE-- CS
  PF00217.14   8 lssrirlaRnlkglpfppklskeereeveekvkkalesl..egelkgkyyplke................lseeeeeqliedhllfkk..vdrllsaaglardwpegrgilvnedktflvwvNeeDHlriismqkg 123
                 ls+r+r++Rnl ++p+p  ++k++r ++e+++ ka++ l  + +  g++y+l+                 +s+++ ++l++ h++fk+   d++l++ag+a+dwp grg++ + d+ f++w  eeD+lri++m kg
   MMETSP1325-20131115|961_1 438 LSMRVRVGRNLTSFPLPGLMTKADRINFEKTMLKAFDVLksDPKYGGTVYSLTPdaawkevtgqaknpnlMSDAKYKELVKAHVMFKDmdADPYLKSAGIASDWPCGRGCYRSADGGFIIWFGEEDQLRIMCMAKG 573
                 79*************************************6555666*******99*********************************999******************************************997 PP

>> PF02807.10  ATP:guanido phosphotransferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2   9.7e-06     0.033      54      75 ..       2      23 ..       1      24 [. 0.95
   2 !   46.7   0.0   6.8e-16   2.3e-12      26      75 ..     355     404 ..     332     405 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 9.7e-06
                -TTHHHHTHHHHHHHHHHHT-- CS
  PF02807.10 54 DeesYevFadlfdpvIedyHkg 75
                D++ Y+ Fa +fd+v e yH+g
   MMETSP1325-20131115|961_1  2 DPKNYDEFAMFFDKVCETYHHG 23
                99******************97 PP

  == domain 2    score: 46.7 bits;  conditional E-value: 6.8e-16
                 B-----BHHHHHHHHHH-TT---------TTHHHHTHHHHHHHHHHHT-- CS
  PF02807.10  26 kTklgvtLadcIqsGvdnpdskvGiyAgDeesYevFadlfdpvIedyHkg 75 
                   +  + La c +sG+dn ds++G+yA D++ Y+ Fa +fd+v e yH+g
   MMETSP1325-20131115|961_1 355 SPDKLAELALCAKSGLDNVDSGLGCYAVDPKNYDEFAMFFDKVCETYHHG 404
                 55566789****************************************97 PP

>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.2    0.0013       4.3       9      22 ..     160     173 ..     158     174 .. 0.89
   2 ?    7.1   0.2    0.0013       4.3       9      22 ..     541     554 ..     539     555 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0013
                 EEE-EEEB------ CS
  PF02493.15   9 krhGkGvytwpdGd 22 
                  ++G G+y+++dG+
   MMETSP1325-20131115|961_1 160 WPCGRGCYRSADGG 173
                 589**********7 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0013
                 EEE-EEEB------ CS
  PF02493.15   9 krhGkGvytwpdGd 22 
                  ++G G+y+++dG+
   MMETSP1325-20131115|961_1 541 WPCGRGCYRSADGG 554
                 589**********7 PP

>> PF00880.13  Nebulin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0    0.0065        22      14      22 ..     126     134 ..     122     134 .. 0.89
   2 ?    4.7   0.0    0.0065        22      14      22 ..     507     515 ..     503     515 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0065
  PF00880.13  14 lqSdvkYKe 22 
                 l+Sd kYKe
   MMETSP1325-20131115|961_1 126 LMSDAKYKE 134
                 89******8 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0065
  PF00880.13  14 lqSdvkYKe 22 
                 l+Sd kYKe
   MMETSP1325-20131115|961_1 507 LMSDAKYKE 515
                 89******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (573 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.83u 0.35s 00:00:01.18 Elapsed: 00:00:00.66
# Mc/sec: 2080.47
//
Query:       MMETSP1325-20131115|964_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 330.93
//
Query:       MMETSP1325-20131115|965_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.60
# Mc/sec: 587.11
//
Query:       MMETSP1325-20131115|962_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-16   59.0   2.3    1.2e-14   54.6   1.6    2.2  1  PF01734.17 Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> PF01734.17  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   1.6   8.8e-19   1.2e-14       2     200 ..       5     176 ..       4     178 .. 0.75

  Alignments for each domain:
  == domain 1    score: 54.6 bits;  conditional E-value: 8.8e-19
  PF01734.17   2 vlsGGGtrGafslgalkaL...kkelgdrfdiisGtSaGaiiaallalgrdpaalvedlrelllnkffdrdllirelaanlaarlsgllgpgglfdaealrellrkvlgdltlkrlsarlgklpllkslataaqavpaittataasastantanslyteddeddvpladavraSsafPglfppvsldgely.....vDGGildNnPi 200
                 v+sGGG rG +  g+l+ L   ++e ++ +  ++G+S+Ga +aa +a+g d++ ++   +++ ++++ + +        ++ ar  + + +++      l + l+ vl+d+ l+   + l+ +                     ++  t+++  ++   ++    +l++ ++aS+++P++  p  ++  ++     +DGG+++N+Pi
   MMETSP1325-20131115|962_1   5 VVSGGGFRGQYAGGVLSILqllEQEGLITIKRWAGSSIGACTAAHFATGNDFESFFRVPWAWQAMWDPRAF--------WRGARVVHEMEKHS-----LLPNALE-VLKDGRLSVVLSELSWP---------------------RPWRTFFFFKRTTVTSFHSRDDLIQTLAASASIPFFTAPSIHGFSRWrgrfaADGGVVNNVPI 176
                 89****************5556*********************8888886666644444444444444444........55555555555555.....5556666.66667766666666666.....................5666899999999999999******************777775553333335**********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.74
# Mc/sec: 1246.75
//
Query:       MMETSP1325-20131115|967_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.4    6.2   7.8        2.7    6.0   5.4    1.0  1  PF03547.13 Membrane transport protein


Domain annotation for each model (and alignments):
>> PF03547.13  Membrane transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   5.4    0.0002       2.7     318     368 ..      27      78 ..      15      80 .. 0.78

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0002
  PF03547.13 318 lgPavmllavlllgLrgl.llkvaivqaalPqgivlfvfakeynvhpeelst 368
                 ++P+v+++++ ++  +   ++++++v++a P+ i  +v+a +  v  +++++
   MMETSP1325-20131115|967_1  27 VVPLVAAAVAVVVASTTIiTASTVVVAVAIPPVIITVVIAVSTAVTVTTAAA 78 
                 678887776666662222488888999**************99999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1162  (0.0849912); expected 273.4 (0.02)
Passed bias filter:                      450  (0.032914); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.64
# Mc/sec: 303.29
//
Query:       MMETSP1325-20131115|968_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-11   40.9   0.0    1.2e-10   40.2   0.0    1.3  1  PF01602.15 Adaptin N terminal region


Domain annotation for each model (and alignments):
>> PF01602.15  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.0   8.9e-15   1.2e-10     365     452 ..       2      87 ..       1     104 [. 0.85

  Alignments for each domain:
  == domain 1    score: 40.2 bits;  conditional E-value: 8.9e-15
  PF01602.15 365 aekfatdaewvldvllellslsgeyvkdeivevirdiiqkvpelhekivekLaellekiespearaaaiWllGeygelvente.sasdl 452
                 a++f++ a++v+ vl+++l+++g   + ++++++r i++++p+l+e++++kL+  + +++   ++ +a+W++Gey+e +e  +    ++
   MMETSP1325-20131115|968_1   2 AVRFPDIADSVVHVLMDFLNTDG---AMDVIVFVRAIVEQYPNLRESVLRKLLMNFGDMQTAPVIGVALWIVGEYCEDAELVKeAFDEI 87 
                 7899999*************554...569************************************************999833244444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.61
# Mc/sec: 691.41
//
Query:       MMETSP1325-20131115|966_1  [L=791]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.3e-124  415.5   3.1     5e-124  414.9   2.2    1.1  1  PF00888.17 Cullin family
    1.3e-24   85.6   0.3    5.5e-24   83.6   0.2    2.2  1  PF10557.4  Cullin protein neddylation domain
  ------ inclusion threshold ------
       0.88    9.0   4.3       0.86    9.1   0.5    2.5  2  PF12104.3  T cell CD4 receptor C terminal region


Domain annotation for each model (and alignments):
>> PF00888.17  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  414.9   2.2  1.1e-127    5e-124       8     589 ..      40     690 ..      30     695 .. 0.93

  Alignments for each domain:
  == domain 1    score: 414.9 bits;  conditional E-value: 1.1e-127
  PF00888.17   8 iekilkksvsslsyeelYsavyni....vpeklgeklYeklkeyleeyvks.lkksllen..deeellkelikeWkkfseaaklinkifryLdryyvkkn...........iwreelfeqikekliealleliekeRkgeaidreliknvveslvelgad...................klevYeeeFekpfleatsefYkkea...lqessvseYlkkveerleeeeervkkylhestekklievvekvLieehletl....esefqklldnekiedLrrmYrllsr..vpegleelkkaleehvkkeglelvekla............eetdpkdyveellelhdklqslvseafkndaaflealdkafesfvnkn..asksaellAkYiDqllkkss..kkleeeeleekldeiitlfkyledkdvFekfYrklLakRLlneksasddaekkmiekLkeecgeeftsklevMlkDislskelnrkfkeelekqldkll...kkidlsvkvLstgfWptlskeksfelPeelekalerfeefYekkksg.RkLtWlhslgkvelklefedktyeltvstvqaaiLllFndkee.ltveelseatklsedlltraLqsllsakvllel...kseedeelednskfslnsnf 589
                  ++i kk +++  y  lY+   n+    ++ +++e+lY+++++++++++k+ + + ll+      ++l+++ k+W +++ ++k+i+++f++Ldr yv ++            + ++ f    e+++  +l++i++eR g++idr+++kn+ve+++ +g                     +l vY ++Fe+pfl++t+e+Y  e    l+++sv+eYl +ve++l eee rv  yl++ t +kl++++ + L++   ++l    +s++  ll+ ek edL+rm+rl++   v+ g+ ++ k++++ v+ +g++l++               e  ++ +++  +l+l++k +++v+++f+n+ +f++a++ af++f nk+  +    ell+ Y+D  lk+ +  +kl+e+++e++l+++++lf yl dkd+F + Yr  LakRLln+k +s++ ek mi++Lk+  g  ft k+e+M+kD +   + n++f+e+l++  ++ +         v+vL+ gfWp +++ + ++lP  l  a+  fe fY++k+ g +k++W+ +lg +e++ +f ++ty l+vst qa+ L   n++++ l ++e s+ ++ +e+  +r+L+sl+++   + +    + + + ++ +++f  n++f
   MMETSP1325-20131115|966_1  40   690
                 556669999*****************99999************9988888766677776677889********************************9999******99999999999999*************************************999******************************************99********************************************************************************97533899**********************99899******9999888888******************************************9988999***************99*******************************************************************************************98666555888666778999*************.************************899**************************************655499************************998876655533444455555666666655 PP

>> PF10557.4  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.6   0.2   1.2e-27   5.5e-24       1      65 [.     715     778 ..     715     781 .. 0.95

  Alignments for each domain:
  == domain 1    score: 83.6 bits;  conditional E-value: 1.2e-27
  PF10557.4   1 veedrkleieaaIVriMKsrktlshneLvaevieqlkkrfkpsvadiKkrIesLIekeYleRdee 65 
                v edr++ i+a++Vr MK+rk+++h+ Lv+ev++ql+ +f+  v diK+rIe+LIe+eYl R e+
  MMETSP1325-20131115|966_1 715 VVEDRSYLIDASVVRTMKARKRMTHHALVSEVANQLQ-TFNARVGDIKRRIENLIEREYLARRED 778
                579*********************************7.************************965 PP

>> PF12104.3  T cell CD4 receptor C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.5   0.00019      0.86       5      18 ..     355     368 ..     354     369 .. 0.91
   2 ?    0.0   0.1      0.13   5.9e+02       8      19 ..     476     486 ..     473     487 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00019
  PF12104.3   5 eRmsqikrlLsEKK 18 
                +R + ikrl sEKK
  MMETSP1325-20131115|966_1 355 ARRAEIKRLVSEKK 368
                58899********9 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 0.13
  PF12104.3   8 sqikrlLsEKKT 19 
                + +krlL  KKT
  MMETSP1325-20131115|966_1 476 ALAKRLLN-KKT 486
                66899886.555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (791 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       690  (0.0504681); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.19u 0.38s 00:00:01.56 Elapsed: 00:00:00.87
# Mc/sec: 2178.76
//
Query:       MMETSP1325-20131115|970_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-50  170.3  15.1    2.7e-50  170.3  10.5    1.6  2  PF00520.26 Ion transport protein
    2.3e-07   29.5   2.1    2.3e-07   29.5   1.4    2.2  2  PF08016.7  Polycystin cation channel


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.24   1.7e+03      39     194 ..      37      47 ..      22      58 .. 0.59
   2 !  170.3  10.5     4e-54   2.7e-50       2     199 .]      68     260 ..      67     260 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.24
                 XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXX.XXXXX CS
  PF00520.26  39 flvvlpslvslilrllnkasgllavlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvkekagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatlragskigyiyfvifiilgsflllnl 194
                 ++                                                                                                                                                 ++++++ln+
   MMETSP1325-20131115|970_1  37 IA-------------------------------------------------------------------------------------------------------------------------------------------------IMIIIMLNV 47 
                 33.................................................................................................................................................333333333 PP

  == domain 2    score: 170.3 bits;  conditional E-value: 4e-54
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX...............XXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  PF00520.26   2 leyvftiiftlemllkiialgfklkftylrdpwnilDflvvlpslvslilrllnkasgllavlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvkekagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatl..........ragskigyiyfvifiilgsflllnlliavi 199
                 l+++ftiiftlem++k+i l +   + y+r+ wn +Df++v++s+ + +   ++     ++++r++rv R+++l+++++gl+ ll +l++s+++l+nv  ll++++fifa++g++lfg+  ++ +        + ++++nf+tfg++++tlfr++tge+w ++my+            +++++ g  +f+if i+g+f++lnl+iavi
   MMETSP1325-20131115|970_1  68 LNWAFTIIFTLEMVVKVIGLSW---NQYWRNSWNKFDFIIVVVSWTEALEIGMGV---DFTLFRVFRVARIAKLVKANQGLKALLLTLVKSLPSLFNVGSLLALLFFIFAVMGMNLFGDAIQDGE--------NLRRYNNFETFGTSMITLFRCLTGENWPKIMYQLAdptnyddkedNNAGSAGA-FFLIFAIMGNFMMLNLFIAVI 260
                 899***************9998...9******************99888888886...5************************************************************998775........99*******************************77********9555555555.555*****************8 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   1.4    0.0017        12     219     257 ..      70     109 ..      52     117 .. 0.84
   2 !   29.5   1.4   3.3e-11   2.3e-07     309     425 ..     129     266 ..     108     267 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0017
  PF08016.7 219 lvfvlyfvveevlkirkeg.asylrsvwnlldlaivvlsv 257
                 +f + f+ e v+k+      +y r+ wn  d++ivv+s 
  MMETSP1325-20131115|970_1  70 WAFTIIFTLEMVVKVIGLSwNQYWRNSWNKFDFIIVVVSW 109
                4688889999999988777689**************9985 PP

  == domain 2    score: 29.5 bits;  conditional E-value: 3.3e-11
  PF08016.7 309 llkllkvlrfnktlslftktlsralkellgfalvivilllayaqlgvllfgsqvd.........nfsnlvksiltlfrlllgafsyt.............elesgnrvLGpllfltlvflvifillnlflavindsyee 425
                + +++k+++ n+ l+ +  tl ++l+ l+ +  ++++l++ +a +g+ lfg  ++         nf+++ +s++tlfr l g +++              + e +n      +fl+++++  f++lnlf+avi++++ e
  MMETSP1325-20131115|970_1 129 VARIAKLVKANQGLKALLLTLVKSLPSLFNVGSLLALLFFIFAVMGMNLFGDAIQdgenlrrynNFETFGTSMITLFRCLTG-ENWPkimyqladptnydDKEDNNAGSAGAFFLIFAIMGNFMMLNLFIAVILENFGE 266
                56889999999999************************************987642222222226888899*****665543.23333444466666665888888888889***********************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       561  (0.0410328); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.75
# Mc/sec: 936.18
//
Query:       MMETSP1325-20131115|971_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-19   68.2   0.0    6.3e-19   67.6   0.0    1.3  1  PF00462.19 Glutaredoxin
  ------ inclusion threshold ------
        0.1   12.7   0.0       0.18   11.9   0.0    1.3  1  PF13417.1  Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   0.0   9.2e-23   6.3e-19       1      60 []      70     134 ..      70     134 .. 0.98

  Alignments for each domain:
  == domain 1    score: 67.6 bits;  conditional E-value: 9.2e-23
                 EEEEE-.....STSHHHHHHHHHHHHTTHHEEEEETTTCHHHHHHHHHHHSSBSSSEEEETTEEE CS
  PF00462.19   1 vvvftk.....ptCpyCkkakrlLdelgvkyeeidvdedpeireelkelsgwrtvPqvfidgehi 60 
                 v++++k     p+C+++++++r+++  gv++  i+v+e++eire +k++s+w+t+Pq+++dge++
   MMETSP1325-20131115|971_1  70 VLLYMKgtpsaPQCGFSQQVVRVMHAVGVDFSSINVLEHQEIREGIKKYSDWPTIPQLYVDGEFV 134
                 789************************************************************97 PP

>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.7e-05      0.18       3      63 ..      79     140 ..      78     148 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.7e-05
                --TTSHHHHHHHHHHHH----EEE----TTTT.HHHHHHH-TT--SSEEE----EEESHHHH CS
  PF13417.1   3 gspfSpyarkvrlaLeekglpyelvevtpgkk.rpellalnpkgkvPvLeddgevltdSlvI 63 
                + p + +++ v  +++  g+++  ++v   +  r+ +++ +   ++P L+ dge + +   I
  MMETSP1325-20131115|971_1  79 SAPQCGFSQQVVRVMHAVGVDFSSINVLEHQEiREGIKKYSDWPTIPQLYVDGEFVGGCDII 140
                5799*********************997665559999999************9988776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.62
# Mc/sec: 630.01
//
Query:       MMETSP1325-20131115|973_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0011   18.9   0.0     0.0014   18.6   0.0    1.2  1  PF03720.10 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
  ------ inclusion threshold ------
       0.11   12.5   0.0       0.13   12.3   0.0    1.1  1  PF14404.1  Ribosomally synthesized peptide in Streptomyces species


Domain annotation for each model (and alignments):
>> PF03720.10  UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   2.1e-07    0.0014      83     106 .]       1      24 [.       1      24 [. 0.95

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 2.1e-07
  PF03720.10  83 dleklkelmkkpavvfDgrnvldp 106
                 d++++++ m+kpa++fDgrn+ld+
   MMETSP1325-20131115|973_1   1 DYQRIYDSMSKPAFLFDGRNILDH 24 
                 799*******************96 PP

>> PF14404.1  Ribosomally synthesized peptide in Streptomyces species
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.9e-05      0.13      22      49 ..       5      31 ..       2      39 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.9e-05
  PF14404.1 22 vyDsalqlnvLldGrvAaeDraLlaelG 49
                yDs  +   L dGr  + D+a l+e+G
  MMETSP1325-20131115|973_1  5 IYDSMSKPAFLFDGRN-ILDHAALREIG 31
               69999999*******6.89********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.62
# Mc/sec: 177.79
//
Query:       MMETSP1325-20131115|974_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-14   52.2   7.3     0.0012   18.3   0.0    5.5  6  PF12799.2 Leucine Rich repeats (2 copies)
    3.6e-07   29.7  11.3      0.058   13.0   0.1    4.3  4  PF13855.1 Leucine rich repeat
     0.0034   17.1  13.3       0.96    9.6   0.0    6.5  6  PF13516.1 Leucine Rich repeat
  ------ inclusion threshold ------
       0.13   11.9   0.0         52    3.5   0.0    3.4  5  PF10805.3 Protein of unknown function (DUF2730)


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   9.3e-05      0.32       2      34 ..      13      45 ..      12      58 .. 0.87
   2 !    8.9   0.0    0.0003         1       4      32 ..      61      89 ..      58      94 .. 0.92
   3 !    8.5   0.1   0.00041       1.4      15      36 ..      96     116 ..      89     125 .. 0.80
   4 !   13.4   0.0   1.1e-05     0.039       1      35 [.     104     138 ..     104     143 .. 0.93
   5 !   18.3   0.0   3.4e-07    0.0012       2      42 ..     128     172 ..     127     173 .. 0.87
   6 !    8.4   0.0   0.00044       1.5      16      37 ..     166     186 ..     158     194 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 9.3e-05
  PF12799.2  2 nLevLdLsnNnIk.dlppelanLpnLktLnLsnN 34
                L+vL+Ls ++I  +l++  a L+ L++L L+n 
  MMETSP1325-20131115|974_1 13 ALQVLNLSATKIGgELSA-TADLTCLTELVLDNS 45
               69**********989***.9*********99985 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0003
  PF12799.2  4 evLdLsnNnIk.dlppelanLpnLktLnLs 32
               +vL+L ++n++ d++  l+ +++L +LnL 
  MMETSP1325-20131115|974_1 61 RVLSLFKTNVEgDIKD-LGAFSSLCQLNLG 89
               89*********99***.***********95 PP

  == domain 3    score: 8.5 bits;  conditional E-value: 0.00041
  PF12799.2  15 dlppelanLpnLktLnLsnNpi 36 
                dl++ l+ L++L+ L L+n+ +
  MMETSP1325-20131115|974_1  96 DLGE-LSCLTSLTILELDNTDV 116
                7888.999**********9866 PP

  == domain 4    score: 13.4 bits;  conditional E-value: 1.1e-05
  PF12799.2   1 tnLevLdLsnNnIk.dlppelanLpnLktLnLsnNp 35 
                t+L+ L L n+ +k dl+  +a+L++L  L+L+++ 
  MMETSP1325-20131115|974_1 104 TSLTILELDNTDVKgDLKS-VAGLRSLHALSLASTG 138
                79************99***.************9875 PP

  == domain 5    score: 18.3 bits;  conditional E-value: 3.4e-07
  PF12799.2   2 nLevLdLsnNnIk.dlppelanLpnLktLnLs....nNpisdlsaL 42 
                +L+ L+L+++ ++ ++++ +a+L+nL+ LnL     + +is+l++L
  MMETSP1325-20131115|974_1 128 SLHALSLASTGVEgEVGA-VAGLTNLRRLNLGitvvSGHISELNPL 172
                6889*********99***.************877777777777776 PP

  == domain 6    score: 8.4 bits;  conditional E-value: 0.00044
  PF12799.2  16 lppelanLpnLktLnLsnNpis 37 
                +++ l  L+ L+ L+++n++i 
  MMETSP1325-20131115|974_1 166 ISE-LNPLTALRCLYIDNTNIR 186
                344.66699**********995 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.1     2e-05     0.068      23      58 ..      10      44 ..       8      46 .. 0.87
   2 !    5.4   0.6    0.0039        13      24      59 ..      80     114 ..      72     116 .. 0.80
   3 !    7.1   0.5    0.0012       4.1      24      58 ..     103     136 ..     100     139 .. 0.86
   4 !   13.0   0.1   1.7e-05     0.058      20      61 .]     145     185 ..     139     185 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2e-05
  PF13855.1 23 glsnLkvLdLsgnnl.ksispeafkgLpsLreLnLsg 58
               +++ L+vL+Ls +++  ++s+ a  +L+ L+eL L++
  MMETSP1325-20131115|974_1 10 DMTALQVLNLSATKIgGELSATA--DLTCLTELVLDN 44
               6899***********77999866..********9976 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0039
  PF13855.1  24 lsnLkvLdLsgnnlksispea..fkgLpsLreLnLsgN 59 
                 s+L  L+L+   l+++s ++  +++L+sL+ L L+++
  MMETSP1325-20131115|974_1  80 FSSLCQLNLG---LTRVSGDLgeLSCLTSLTILELDNT 114
                4689999999...77776655559***********987 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0012
  PF13855.1  24 lsnLkvLdLsgnnlksispeafkgLpsLreLnLsg 58 
                l++L+ L L  n     + ++ +gL+sL  L+L +
  MMETSP1325-20131115|974_1 103 LTSLTILELD-NTDVKGDLKSVAGLRSLHALSLAS 136
                7899999999.888888889999999999999987 PP

  == domain 4    score: 13.0 bits;  conditional E-value: 1.7e-05
  PF13855.1  20 aFkglsnLkvLdLsgnnlksispea..fkgLpsLreLnLsgNrl 61 
                a  gl+nL+ L+L+   ++++s ++  ++ L++Lr L+++++++
  MMETSP1325-20131115|974_1 145 AVAGLTNLRRLNLG---ITVVSGHIseLNPLTALRCLYIDNTNI 185
                6689**********...6666666556**************997 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00028      0.96       2      17 ..      12      27 ..      11      31 .. 0.86
   2 ?   -0.2   0.1      0.39   1.3e+03       1      11 [.      34      44 ..      34      51 .. 0.79
   3 ?    4.7   0.0     0.011        37       1      24 []      57      85 ..      57      87 .. 0.82
   4 ?   -0.6   0.0      0.56   1.9e+03       2      16 ..      81      95 ..      80      99 .. 0.73
   5 ?    2.7   0.2     0.048   1.6e+02       1      16 [.     103     118 ..     100     146 .. 0.79
   6 ?    2.3   0.5     0.063   2.2e+02       1      10 [.     149     158 ..     149     189 .. 0.70

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00028
  PF13516.1  2 knLtsLdLsnNqigde 17
               + L++L+Ls ++ig+e
  MMETSP1325-20131115|974_1 12 TALQVLNLSATKIGGE 27
               569***********98 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.39
  PF13516.1  1 lknLtsLdLsn 11
               l++Lt+L L n
  MMETSP1325-20131115|974_1 34 LTCLTELVLDN 44
               689****9987 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.011
  PF13516.1  1 lknLtsLdLsnNq....igdeGl.saLan 24
               ++++++L L +++    i d G+ s+L++
  MMETSP1325-20131115|974_1 57 CPWIRVLSLFKTNvegdIKDLGAfSSLCQ 85
               9********99996777777887777775 PP

  == domain 4    score: -0.6 bits;  conditional E-value: 0.56
  PF13516.1  2 knLtsLdLsnNqigd 16
               ++L  L+L+ + +++
  MMETSP1325-20131115|974_1 81 SSLCQLNLGLTRVSG 95
               578889998877755 PP

  == domain 5    score: 2.7 bits;  conditional E-value: 0.048
  PF13516.1   1 lknLtsLdLsnNqigd 16 
                l++Lt L L n+++ +
  MMETSP1325-20131115|974_1 103 LTSLTILELDNTDVKG 118
                5778888899988644 PP

  == domain 6    score: 2.3 bits;  conditional E-value: 0.063
  PF13516.1   1 lknLtsLdLs 10 
                l+nL+ L+L+
  MMETSP1325-20131115|974_1 149 LTNLRRLNLG 158
                5788888886 PP

>> PF10805.3  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.12   4.2e+02      55      85 ..       2      32 ..       1      49 [. 0.69
   2 ?    3.5   0.0     0.015        52      53      85 ..      69     101 ..      67     110 .. 0.87
   3 ?   -0.4   0.0      0.25   8.4e+02      65      84 ..     104     123 ..      90     134 .. 0.69
   4 ?    0.6   0.0      0.12     4e+02      54      84 ..     116     146 ..     110     157 .. 0.78
   5 ?    2.1   0.0      0.04   1.4e+02      54      85 ..     139     170 ..     136     175 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.12
  PF10805.3 55 etkleslPtakdvhaLkieltelrGelkels 85
               e kl+ +     ++ L++  t++ Gel ++ 
  MMETSP1325-20131115|974_1  2 EGKLSDVADMTALQVLNLSATKIGGELSATA 32
               5566666666677888899999999999885 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.015
  PF10805.3  53 eletkleslPtakdvhaLkieltelrGelkels 85 
                ++e  ++ l     + +L++ lt ++G+l els
  MMETSP1325-20131115|974_1  69 NVEGDIKDLGAFSSLCQLNLGLTRVSGDLGELS 101
                5788888888888999*************9997 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.25
  PF10805.3  65 kdvhaLkieltelrGelkel 84 
                  ++ L++  t+++G+lk +
  MMETSP1325-20131115|974_1 104 TSLTILELDNTDVKGDLKSV 123
                45666788888999999875 PP

  == domain 4    score: 0.6 bits;  conditional E-value: 0.12
  PF10805.3  54 letkleslPtakdvhaLkieltelrGelkel 84 
                ++  l+s+ +   +haL +  t ++Ge+ ++
  MMETSP1325-20131115|974_1 116 VKGDLKSVAGLRSLHALSLASTGVEGEVGAV 146
                5666777777788999999999999998875 PP

  == domain 5    score: 2.1 bits;  conditional E-value: 0.04
  PF10805.3  54 letkleslPtakdvhaLkieltelrGelkels 85 
                +e ++  + +  ++ +L++ +t ++G + el+
  MMETSP1325-20131115|974_1 139 VEGEVGAVAGLTNLRRLNLGITVVSGHISELN 170
                67777888888899**************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.81
# Mc/sec: 609.44
//
Query:       MMETSP1325-20131115|976_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.60
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|977_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-34  118.6   0.0    1.7e-34  118.1   0.0    1.2  1  PF01196.14 Ribosomal protein L17


Domain annotation for each model (and alignments):
>> PF01196.14  Ribosomal protein L17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.1   0.0   1.2e-38   1.7e-34       1      97 []     129     225 .]     129     225 .] 0.99

  Alignments for each domain:
  == domain 1    score: 118.1 bits;  conditional E-value: 1.2e-38
                 HHHHHHHHHHH---EEEEHHHHHHH---HHHHHHHHT---HHHHHHHHTTS--HHHHHHHHHTHHHHTTT-----EEEEEEEE------EEEEEEE- CS
  PF01196.14   1 llrnlvtsLieherIetTlakAkelrklveklitlakkkelaarrqalavlkdkevvkklfdelapryadrnggYtrilklgpRkgDaaemailelv 97 
                 llr+l+t++i+h+rI+tTl +Ak++r++v+k+i+l+k+++l++rrqa+a+l+dke+v+ lf++  +ryadr+ggY+r+l++ pR+gD+a+m i+elv
   MMETSP1325-20131115|977_1 129 LLRSLTTEVIRHGRIKTTLVRAKAIRPCVDKMIQLSKDGSLHSRRQAMAFLYDKELVHALFENAPERYADREGGYCRVLRTMPRQGDNAKMGIIELV 225
                 79**********************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.65
# Mc/sec: 829.51
//
Query:       MMETSP1325-20131115|979_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.37s 00:00:00.63 Elapsed: 00:00:00.56
# Mc/sec: 158.33
//
Query:       MMETSP1325-20131115|978_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-26   90.2   0.3    6.7e-26   89.7   0.2    1.3  1  PF00333.15 Ribosomal protein S5, N-terminal domain
    1.9e-21   75.0   0.0    2.9e-21   74.3   0.0    1.3  1  PF03719.10 Ribosomal protein S5, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00333.15  Ribosomal protein S5, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.7   0.2   9.8e-30   6.7e-26       2      66 ..      68     132 ..      67     133 .. 0.98

  Alignments for each domain:
  == domain 1    score: 89.7 bits;  conditional E-value: 9.8e-30
                 ---EEEEEE-SSCB-----BS-EEEEEE-------B----BEESSHHHHHHHHHCCCTTS-B--- CS
  PF00333.15   2 leekvlkikrVskvtkgGrrlrFkAlvvVGdknGrvGlGvgkakevaeAIrkAieeAkknlievr 66 
                 l+++v+ ik+Vsk+t +G+rlrFkA vvVGd++G++GlG ++akeva+ Ir++i  Ak nl++vr
   MMETSP1325-20131115|978_1  68 LKDEVMCIKPVSKQTSAGQRLRFKAYVVVGDQKGHIGLGHKCAKEVATSIRGGIISAKMNLVPVR 132
                 99**************************************************************8 PP

>> PF03719.10  Ribosomal protein S5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.3   0.0   4.3e-25   2.9e-21       2      66 ..     151     216 ..     150     223 .. 0.94

  Alignments for each domain:
  == domain 1    score: 74.3 bits;  conditional E-value: 4.3e-25
                 EEE----EEEEEE-------B---HHHHHHHH----SEEEEEE-.---HHHHHHHHHHHHTT---H CS
  PF03719.10   2 egkfgavkVllkpAprGtGiiaggavravlelaGikDvlakslg.srnpinvvkAtfeALkklrtv 66 
                 +gk+g+ +V+l+pAprGtG++a +a +++l +aG  D++++s+g +r++ n+vkA+f AL+k + +
   MMETSP1325-20131115|978_1 151 TGKCGSIRVRLIPAPRGTGLVAAPASKKLLAMAGLDDCYTSSRGhTRSMGNFVKAVFFALRKSYGY 216
                 79***********************************************************98866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.41s 00:00:00.90 Elapsed: 00:00:00.66
# Mc/sec: 907.71
//
Query:       MMETSP1325-20131115|980_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-22   77.9   0.1    6.2e-22   77.2   0.1    1.3  1  PF09912.4 Uncharacterized protein conserved in bacteria (DUF2141)


Domain annotation for each model (and alignments):
>> PF09912.4  Uncharacterized protein conserved in bacteria (DUF2141)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.1   4.6e-26   6.2e-22       1     104 [.      96     208 ..      96     216 .. 0.91

  Alignments for each domain:
  == domain 1    score: 77.2 bits;  conditional E-value: 4.6e-26
  PF09912.4   1 vtveglksaeGevlvalysseegf.......ekkekalaraevkvek.gsatvtfedlppGtYAvavfhDengngkldtnflgiPkEgyGfSnnakislg.pPsfedaafevk 104
                v+ eg+ +++G   + +++s++++       ++++ a+++ ++++++ + +++ +++ ++G+Y+v+v+hDen ng++d+n++g+P+Eg G Sn a++  g  Ps+ da+f v 
  MMETSP1325-20131115|980_1  96 VKAEGFDNDNGVAKIWVHDSKNQWnkdkddwDNNQGAYHTGTTDINDvDDVQFLIPVTESGNYGVMVVHDENTNGDMDKNWIGMPTEGCGASNGAQGGAGgGPSWGDAKFYVP 208
                6778999999999999999977777777776899999***********************************************************776659********885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.61
# Mc/sec: 872.12
//
Query:       MMETSP1325-20131115|983_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 787.37
//
Query:       MMETSP1325-20131115|984_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-29  100.5   0.0    1.4e-28  100.0   0.0    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.0   0.0     1e-32   1.4e-28       9     155 ..      21     196 ..      16     197 .. 0.71

  Alignments for each domain:
  == domain 1    score: 100.0 bits;  conditional E-value: 1e-32
                 XXXXXXXXXXXX.---...............-TTTTT--------TTT--------------.........----S--TT--.......STT.--.....---....--S-TT.THHHH---HHHHHHHHTT------------------------..-----------STTT----TTTTT------- CS
  PF00504.16   9 lpgdlgfDplglskdp...............tlkrlreaEliHGRvAMlavlGalvpelltk.........lsaaskfaelpa......wae.ag.....gls....lptllalqillligflelareqelkapesegsekraypGglgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 l++d+gfDplglsk                  l+ +r aEl HGR+AMla+l++ ++ell           +         ++      +ae +g       +    + +l+a+   + +g+  + +++ l+ ++++   ++ +pG++gfdpl l    ++e+ a++++kEi+nGRlAM+a++ fv+++
   MMETSP1325-20131115|984_1  21 LAADYGFDPLGLSKIDffpagaadkqrspeiVLRDYRDAELRHGRLAMLAALAWPMQELLSPsiarianreF---------LNpglsdiLAEtSGrspsvL-NggleQGGLAAFLLGVGMGIGAIDSVS-LRIKDEM--GDNFVPGDFGFDPLRLLkgATPEAVADMQEKEINNGRLAMVAITIFVLEE 196
                 679**********655688899999*********************************99767655322220.........22223344333233443320.233334444443444444444443332.2333333..4799**********965599**************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.60
# Mc/sec: 1042.42
//
Query:       MMETSP1325-20131115|987_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.68
# Mc/sec: 440.51
//
Query:       MMETSP1325-20131115|991_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-07   30.0   0.2    3.2e-07   29.9   0.1    1.0  1  PF07258.9 HCaRG protein


Domain annotation for each model (and alignments):
>> PF07258.9  HCaRG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.1   2.3e-11   3.2e-07     126     178 .]       2      54 ..       1      54 [. 0.97

  Alignments for each domain:
  == domain 1    score: 29.9 bits;  conditional E-value: 2.3e-11
  PF07258.9 126 selqevnsPvilleLklqngggssetvtfelseeklqellkelkeaqkeleal 178
                s+l+++ +Pv+ + L l+ + gs ++ ++e++e+ l+++l++l++++k+le+l
  MMETSP1325-20131115|991_1   2 SHLSSMRKPVLMVDLSLKYADGSMKNTVLEFNEADLDSVLDSLSSVEKVLERL 54 
                899***********************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.26s 00:00:00.56 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|992_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0057   16.3   2.7       0.02   14.6   1.0    2.6  1  PF06698.6  Protein of unknown function (DUF1192)
  ------ inclusion threshold ------
       0.16   11.1   4.7       0.17   11.0   3.3    1.1  1  PF00328.17 Histidine phosphatase superfamily (branch 2)
       0.29   11.0   8.4        0.8    9.6   5.1    2.2  1  PF08987.5  Protein of unknown function (DUF1892)
       0.39   10.5  19.7      0.084   12.7   5.0    2.2  2  PF06818.10 Fez1
       0.54    8.6   7.5       0.64    8.3   5.2    1.1  1  PF11853.3  Protein of unknown function (DUF3373)
        2.3    5.3  23.7        2.7    5.0  16.4    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
        2.7    8.6  16.3       0.65   10.6   3.0    2.3  2  PF07303.8  Occludin homology domain
        2.8    5.5  14.0        2.2    5.8   9.0    1.3  1  PF01496.14 V-type ATPase 116kDa subunit family
        3.5    7.1   7.9        9.6    5.7   0.9    2.0  2  PF09674.5  Protein of unknown function (DUF2400)
        5.5    7.1   9.1       0.27   11.3   0.5    2.3  2  PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
        6.8    6.6  12.5        1.3    9.0   1.5    2.3  2  PF08702.5  Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   1.0   1.6e-05      0.02      26      50 ..      25      49 ..      23      52 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.6e-05
  PF06698.6 26 LeeRIalLqaEIaRleaalakkkas 50
               L++RI +L +E+ Rl+++ ++k+a 
  MMETSP1325-20131115|992_1 25 LQDRIDQLSQEMVRLRDEHREKEAA 49
               89********************986 PP

>> PF00328.17  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.3   0.00014      0.17     146     251 ..      12     121 ..       2     164 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00014
                 ..CCTSSSTTS-SS-HHHHC........HHHHHHHSHHHHHHHHHHHHHHHHHHHHH----.---HHHHCCCCHHHHHHHH-HTT-TTGCCS-H...HHHHHHHHHHHHHHH- CS
  PF00328.17 146 kkklkellregaescpafawp......pikvekrvvelvnklkkvmdenlakrlsalctgednllfkerweklfreffeeekfdiskipelydtm.kydalhnrqledleely 251
                 +++++e l +g+    + ++       +    ++++++++k k++++++la+++    t ++ + +k++ ++  +e++ eek +  ++ e +d++ k +a++n++ + l+e+ 
   MMETSP1325-20131115|992_1  12 EQAEAEHLAKGKRLQDRIDQLsqemvrLRDEHREKEAALRKKKEKHEHDLAAQI---KTYDTDMAAKQTETLELMELMKEEKGELDQLEEYFDKIdKNQAQKNEEERILTEFK 121
                 457777777777666666665555333333444455555555555556666444...555999*****************************************977777643 PP

>> PF08987.5  Protein of unknown function (DUF1892)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   5.1   0.00064       0.8      24      71 ..      68     113 ..      25     120 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00064
                -TTT-S------S-EEEEEEE---TT-HHHHHHHHHHHHHHHHTT--- CS
  PF08987.5  24 teedekkkekkmhelldelvlplqvdeldelneffdkfdeeiaipneg 71 
                 ++d + k+ ++ el++   +  +  eld+l+e+fdk d++ a +ne+
  MMETSP1325-20131115|992_1  68 YDTDMAAKQTETLELMEL--MKEEKGELDQLEEYFDKIDKNQAQKNEE 113
                445555566666666655..555789********************97 PP

>> PF06818.10  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   2.5     0.023        29      20      54 ..      23      57 ..      13      63 .. 0.81
   2 ?   12.7   5.0   6.8e-05     0.084      16     111 ..      62     157 ..      59     164 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.023
  PF06818.10 20 kesqaelaqkaseilsLraqlrearaelqeseekl 54
                k  q  + q + e++ Lr + re  a l++++ek 
   MMETSP1325-20131115|992_1 23 KRLQDRIDQLSQEMVRLRDEHREKEAALRKKKEKH 57
                55678888899999999999999999999888765 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 6.8e-05
  PF06818.10  16 kqqLkesqaelaqkaseilsLraqlrearaelqeseeklqelkdalrtktleLevceneLqrkkseae.llrekagrleaelaelrealasagtlke 111
                   q+k   +++a k +e l L   ++e ++el++ ee + ++ +    ++ e e    e +r+ + a  +l  +a++++a ++ + e++  ag++k+
   MMETSP1325-20131115|992_1  62 AAQIKTYDTDMAAKQTETLELMELMKEEKGELDQLEEYFDKIDKNQA-QKNEEERILTEFKRRLDAARgVLDTAATKVQARARGVAERARLAGSKKG 157
                 5799***********************************99987665.5667799999**999988753899999*********9999988866654 PP

>> PF11853.3  Protein of unknown function (DUF3373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.2   0.00051      0.64      25     108 ..      20     118 ..       7     148 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00051
  PF11853.3  25 adidklq.kiekLkkeleelkeqlkdlkkkvekiekksagdrlkisgdfrfrvdsleyktkalsqlmtaaa..............qvpgskvkndslyt 108
                a  ++lq +i++L++e+  l+++ ++ +  ++k ++k ++d       + + + + +++t +l++lm++ +              + +++k + + ++t
  MMETSP1325-20131115|992_1  20 AKGKRLQdRIDQLSQEMVRLRDEHREKEAALRKKKEKHEHDLAAQIKTYDTDMAAKQTETLELMELMKEEKgeldqleeyfdkidKNQAQKNEEERILT 118
                55567788*********************************999999************9999**9999999999999988877655555555555554 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  16.4    0.0022       2.7     377     526 ..       2     148 ..       1     153 [. 0.74

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0022
  PF12128.3 377 dvqekferrkqkikeqleeeleknkerleaireekerqkaaieealealesqlrkqleaqkeelneeekelesrleelklrldsatateeeleqleaadealekaqeelekaeaevealqseeeqlrkkrdealealqkaerrleelrea 526
                ++ ++++++  +++ ++ ++ +++++r +++++e  r++ +++e+  al+++ +k +++  ++++   ++   ++++    l+ +++ +ee+ +l + +e ++k ++++ ++++e++ l++ +++l+++r   ++a +k ++r++ ++e+
  MMETSP1325-20131115|992_1   2 SIRQEMKENMEQAEAEHLAKGKRLQDRIDQLSQEMVRLRDEHREKEAALRKKKEKHEHDLAAQIK--TYDTDMAAKQ-TETLELMELMKEEKGELDQLEEYFDKIDKNQAQKNEEERILTEFKRRLDAARGVLDTAATKVQARARGVAER 148
                688999999999999****************************9999998887755554444444..4444443333.334566777788888888888888888888888888888888888888888877777777666666655544 PP

>> PF07303.8  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   3.1     0.071        89      10      51 ..       8      51 ..       1      66 [. 0.57
   2 ?   10.6   3.0   0.00053      0.65       9      68 ..      64     123 ..      60     137 .. 0.92

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.071
  PF07303.8 10 rqrYkaeFdsdykeYkeLqaeldeiskklaeldaelkslke..g 51
               +++ ++  ++ +++ k+Lq ++d++s+++ +l +e ++ +   +
  MMETSP1325-20131115|992_1  8 KENMEQAEAEHLAKGKRLQDRIDQLSQEMVRLRDEHREKEAalR 51
               34444444556666788888888888888877766655444221 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00053
  PF07303.8   9 qrqrYkaeFdsdykeYkeLqaeldeiskklaeldaelkslkegseeykevakileeyekl 68 
                q ++Y ++ +++ +e  eL + ++e + +l++l++ ++++ +++ + +e ++il+e+++ 
  MMETSP1325-20131115|992_1  64 QIKTYDTDMAAKQTETLELMELMKEEKGELDQLEEYFDKIDKNQAQKNEEERILTEFKRR 123
                567999*************************************99999999******984 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   9.0    0.0018       2.2      19     129 ..      29     137 ..      15     164 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0018
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....X CS
  PF01496.14  19 vsafqrkfvnevrrldeverklrkleseikkakielkdekekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrelssld 129
                 +++++ ++v+   +  e e +lrk +++ +++ +++ ++ +   +++++e ++l e ++e + el+++ee+ ++++k+ ++++e++ +l+e k+ l+++    + + + ++
   MMETSP1325-20131115|992_1  29 IDQLSQEMVRLRDEHREKEAALRKKKEKHEHDLAAQIKTYDTDMAAKQTETLELMELMKEEKGELDQLEEYFDKIDKNQAQKNEEERILTEFKRRLDAAR--GVLDTAATK 137
                 455555566666666777788888888888877777778888888888899****************************************999999953..333333333 PP

>> PF09674.5  Protein of unknown function (DUF2400)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.9    0.0077       9.6      90     137 ..       7      54 ..       1      69 [. 0.72
   2 ?    5.4   1.0    0.0095        12      73     122 ..      75     127 ..      55     161 .. 0.67

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0077
  PF09674.5  90 eaesleelllkakkkeeellealselikalleleakskgskallklls 137
                 +e++e++ +++ +k ++l++++++l++++ +l+ ++++++a l++ +
  MMETSP1325-20131115|992_1   7 MKENMEQAEAEHLAKGKRLQDRIDQLSQEMVRLRDEHREKEAALRKKK 54 
                4567999999999*******************9666666555544332 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0095
  PF09674.5  73 nsedlaallkalkrikeeaesleelll...kakkkeeellealselikallel 122
                +++++ +l++ +k+ k e ++lee++    k++++++e ++ l+e++++l + 
  MMETSP1325-20131115|992_1  75 KQTETLELMELMKEEKGELDQLEEYFDkidKNQAQKNEEERILTEFKRRLDAA 127
                56778888889999999999999999955433334444445566777766654 PP

>> PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   1.4      0.69   8.6e+02      51      85 ..      11      45 ..       5      83 .. 0.50
   2 ?   11.3   0.5   0.00022      0.27      32      81 ..     105     149 ..      91     157 .. 0.77

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.69
               HHHHHHHHHHHHHHHHH---------HHHHHHHHH CS
  PF08028.6 51 ldaAralleraaerlealadrgaevtpeeraearr 85
               +++A+a +++  +rl++ +d+ ++  + +r e r 
  MMETSP1325-20131115|992_1 11 MEQAEAEHLAKGKRLQDRIDQLSQEMVRLRDEHRE 45
               55555555555555554444444333333333332 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00022
                -B----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHH CS
  PF08028.6  32 aklaedpatqlrlAeaaaeldaAralleraaerlealadrgaevtpeera 81 
                +++a++    + l+e++ +ldaAr +l+ aa++++a ++rg     +era
  MMETSP1325-20131115|992_1 105 KNQAQKNEEERILTEFKRRLDAARGVLDTAATKVQA-RARGV----AERA 149
                56677777778899*******************666.33333....2344 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.5     0.001       1.3      86     131 ..       2      47 ..       1      53 [. 0.87
   2 ?    2.7   2.3     0.092   1.1e+02      91     130 ..      65     103 ..      47     145 .. 0.41

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.001
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF08702.5  86 slekkiililekkilaqesqirvLqevlrsneskiqrLeqdiaqke 131
                s+++++   +e+   ++ ++ + Lq+ +++ ++++ rL+++  +ke
  MMETSP1325-20131115|992_1   2 SIRQEMKENMEQAEAEHLAKGKRLQDRIDQLSQEMVRLRDEHREKE 47 
                5677777899****************************99877776 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.092
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF08702.5  91 iililekkilaqesqirvLqevlrsneskiqrLeqdiaqk 130
                i  ++++ + a++++  +L e +++ + ++ +Le+  ++ 
  MMETSP1325-20131115|992_1  65 I-KTYDTDMAAKQTETLELMELMKEEKGELDQLEEYFDKI 103
                2.22222222222222222222222222222222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2463  (0.180149); expected 273.4 (0.02)
Passed bias filter:                      820  (0.0599766); expected 273.4 (0.02)
Passed Vit filter:                       115  (0.00841135); expected 13.7 (0.001)
Passed Fwd filter:                        43  (0.00314511); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.02u 0.46s 00:00:01.48 Elapsed: 00:00:00.99
# Mc/sec: 401.81
//
Query:       MMETSP1325-20131115|989_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-17   63.7   0.0    1.4e-17   63.5   0.0    1.1  1  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase
  ------ inclusion threshold ------
      0.057   12.5   2.2      0.066   12.3   1.5    1.1  1  PF05285.7  SDA1
        2.8    8.2  12.3       0.36   11.1   4.2    2.1  2  PF00428.14 60s Acidic ribosomal protein
        4.8    4.8   7.8        6.3    4.4   5.4    1.1  1  PF04147.7  Nop14-like family
        5.9    6.2   8.7          9    5.6   6.0    1.2  1  PF03066.10 Nucleoplasmin
        6.5    5.6   9.1        9.7    5.1   6.3    1.2  1  PF06213.7  Cobalamin biosynthesis protein CobT
        9.4    5.2   6.2         13    4.8   4.3    1.2  1  PF06524.7  NOA36 protein


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0     7e-21   1.4e-17     182     250 ..      98     219 ..      72     221 .. 0.77

  Alignments for each domain:
  == domain 1    score: 63.5 bits;  conditional E-value: 7e-21
  PF01504.13 182 k.................................................eeeekekgiesed.....ekevlylgiIDiLqeYtlkKkleslvksllklkgkdisvvsPkeYakRFlkfiek 250
                 +                                                  +++++ gi+++d      ++++++giIDiLqeY+++K++e+++k +  ++ + is+vsP++YakRF +f++ 
   MMETSP1325-20131115|989_1  98 EsdvsdsesddegggsgavnlfnrpprpdptdltvgdeglnpgtmqrvfsLTRREDYGINERDeaghkGNSIYFFGIIDILQEYNTAKRAETWFKGF-SHDTNLISCVSPDRYAKRFSEFLTA 219
                 144555666666777777777777777777777777777777777676665556666666666788889****************************.9999******************976 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.5   3.4e-05     0.066      87     126 ..      72     109 ..      66     189 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.4e-05
  PF05285.7  87 eeegleseedddeeWdvdsdeededeDeegewvdvesdee 126
                ++ g+++e + +e W +++dee+e+eDee++  d esd+e
  MMETSP1325-20131115|989_1  72 RSSGEAAE-QMSESW-AEEDEEEEEEDEESDVSDSESDDE 109
                44444444.444449.668888888888888888888855 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.3      0.34   6.7e+02      43      63 ..      24      44 ..       8      49 .. 0.61
   2 ?   11.1   4.2   0.00019      0.36      52      84 ..      74     111 ..      57     119 .. 0.58

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.34
  PF00428.14 43 saklaaaaaaaaaaaaaaaaa 63
                 + + aaaa++ ++++ ++++
   MMETSP1325-20131115|989_1 24 LTRGKAAAASPGSGGGGGGGE 44
                333337777888877777766 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00019
  PF00428.14  52 aaaaaaaaaaaaaaaeeekkeeeee....E.eedddmG 84 
                 ++ aa++ +++ a+++ee++ee ee    + e+dd+ G
   MMETSP1325-20131115|989_1  74 SGEAAEQMSESWAEEDEEEEEEDEEsdvsDsESDDEGG 111
                 44455555555555555555555555665334444444 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   5.4    0.0032       6.3     338     369 ..      78     109 ..      42     116 .. 0.64

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0032
  PF04147.7 338 eeeeeegvededeeeddddeeeeeedvdedee 369
                 e+ +e+ ++edeee+++dee++ +d+++d+e
  MMETSP1325-20131115|989_1  78 AEQMSESWAEEDEEEEEEDEESDVSDSESDDE 109
                22223445556666666666644444444433 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   6.0    0.0046         9     110     138 ..      80     108 ..      65     115 .. 0.56

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0046
                 ........----XXXXXXXXXXXXXXXXX CS
  PF03066.10 110 eedesldeeddeedeeeeddeedddeeee 138
                 + +es++eed+ee+ee+e+ +  d+e+++
   MMETSP1325-20131115|989_1  80 QMSESWAEEDEEEEEEDEESDVSDSESDD 108
                 33445555555554444444444443333 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   6.3     0.005       9.7     205     245 ..      74     112 ..      66     120 .. 0.66

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.005
  PF06213.7 205 klelaeelgdeeessdseekrdedddkedeeddaseeeesg 245
                + e ae++++   ++d+ee++  +d+++d  d +s++e+ g
  MMETSP1325-20131115|989_1  74 SGEAAEQMSESWAEEDEEEEE--EDEESDVSDSESDDEGGG 112
                567788888888877777774..445555555555555554 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   4.3    0.0067        13     257     299 ..      73     110 ..      45     121 .. 0.59

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0067
  PF06524.7 257 ssdkygdaksvnygyesdddeeesaedydeeededddddeeed 299
                ss++ ++  s ++++e     +e++e++dee+d  d+++++e+
  MMETSP1325-20131115|989_1  73 SSGEAAEQMSESWAEE-----DEEEEEEDEESDVSDSESDDEG 110
                4555555555555444.....4444445555555555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       549  (0.0401551); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.62
# Mc/sec: 1051.31
//
Query:       MMETSP1325-20131115|993_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-40  138.9   0.1    1.2e-40  138.7   0.1    1.1  1  PF00227.21 Proteasome subunit


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.7   0.1   8.6e-45   1.2e-40       3     190 .]      62     251 ..      60     251 .. 0.97

  Alignments for each domain:
  == domain 1    score: 138.7 bits;  conditional E-value: 8.6e-45
                 C--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHH........STTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEEE CS
  PF00227.21   3 kGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktllekly........kedltleeavelavkalkealerdklsgknvevavi 190
                 +G+t++++ gkd+vv+a d+r ++g  + ++++v+K+++++ ++++a+aG  +D++tl++++r ++q+y++  ++++s+     ++a++l+++++++++ p++   ++ag+deeg++ +++ d +Gs+ +  ++ a Gsg+ + ++l+++l+         +d+t+ee+v +++ a   a erd ++g+ ve++vi
   MMETSP1325-20131115|993_1  62 NGGTTLAVSGKDFVVVAGDTRMSSGYEI-KSRNVPKLHQLTSKTVLAAAGCKTDVDTLTNMLRTRMQMYEHDCNKEMSTT----AVAQMLSNTLYYRRFFPYYSFNVLAGLDEEGKGAVFSYDAIGSYERT-PFSASGSGQSYLIPLMDNLVtfktrldpVPDMTVEEIVSIVKDAFVTAGERDIYTGDAVEIKVI 251
                 89*********************99999.7777***********************************************....9**********************************************.7*******************9999999999*******************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      442  (0.0323288); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.70
# Mc/sec: 910.62
//
Query:       MMETSP1325-20131115|994_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.65
# Mc/sec: 188.02
//
Query:       MMETSP1325-20131115|990_1  [L=641]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-22   78.9   5.2    1.4e-06   27.6   0.0    4.1  5  PF12799.2  Leucine Rich repeats (2 copies)
    4.9e-15   54.9  14.1    5.7e-08   32.2   0.2    3.2  4  PF13855.1  Leucine rich repeat
    1.2e-06   27.8   6.8        1.2    9.3   0.0    5.8  6  PF13516.1  Leucine Rich repeat
    5.6e-06   25.6   0.6         11    6.5   0.1    5.6  6  PF13504.1  Leucine rich repeat
    2.2e-05   23.7   6.8         14    6.0   0.0    6.1  6  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   6.9e-05      0.19       6      43 ..      30      66 ..      29      68 .. 0.88
   2 !   26.4   0.8   1.3e-09   3.5e-06       1      43 [.      69     110 ..      69     111 .. 0.96
   3 !   20.3   1.6     1e-07   0.00027       4      41 ..      94     130 ..      90     133 .. 0.92
   4 !   26.2   0.8   1.5e-09     4e-06       3      40 ..     115     154 ..     113     158 .. 0.85
   5 !   27.6   0.0   5.3e-10   1.4e-06       1      36 [.     138     175 ..     138     184 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.9e-05
  PF12799.2  6 LdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43
               L+L +    ++++ l   + Lk+ +L++N i ++s L+
  MMETSP1325-20131115|990_1 30 LYLHYKGFREIKA-LEAYTGLKVVWLEGNGIGEISGLE 66
               7888888889999.999999***************997 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 1.3e-09
  PF12799.2   1 tnLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43 
                t+L++L+L +N I++l++ l  L+ L tLn+s N i  + +L+
  MMETSP1325-20131115|990_1  69 TKLRTLYLHENCIEELKG-LDTLTILDTLNVSKNYIRTIANLS 110
                79****************.*****************9999885 PP

  == domain 3    score: 20.3 bits;  conditional E-value: 1e-07
  PF12799.2   4 evLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsa 41 
                 +L+ s+N I  + + l+ ++ L+tL +snN++s+ + 
  MMETSP1325-20131115|990_1  94 DTLNVSKNYIRTIAN-LSACQALTTLIISNNKLSSADD 130
                589************.******************9765 PP

  == domain 4    score: 26.2 bits;  conditional E-value: 1.5e-09
  PF12799.2   3 LevLdLsnNnIk...dlppelanLpnLktLnLsnNpisdls 40 
                L++L +snN+++   d+ + +  Lp+L+tL++++N i+d++
  MMETSP1325-20131115|990_1 115 LTTLIISNNKLSsadDIRH-VLELPKLQTLDVQSNDIDDVE 154
                9**********93334667.889***************986 PP

  == domain 5    score: 27.6 bits;  conditional E-value: 5.3e-10
  PF12799.2   1 tnLevLdLsnNnIkdlp..pelanLpnLktLnLsnNpi 36 
                ++L++Ld ++N I d++  ++++++p+L++L+L++Np+
  MMETSP1325-20131115|990_1 138 PKLQTLDVQSNDIDDVEilEVVSKMPSLRVLYLQGNPV 175
                79************95533559**************96 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.3   1.3e-07   0.00037       2      61 .]      48     103 ..      47     103 .. 0.93
   2 !   26.7   1.5   1.1e-09   3.1e-06       3      61 .]      93     150 ..      91     150 .. 0.94
   3 !   32.2   0.2   2.1e-11   5.7e-08       3      60 ..     115     174 ..     113     175 .. 0.91
   4 ?   -1.8   0.0      0.86   2.4e+03      11      31 ..     178     197 ..     175     198 .. 0.82

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 1.3e-07
  PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 Lk+++L +N + +i+   +++ ++L++L+L++n+++++    ++ L+ L+ Ln+s N +
  MMETSP1325-20131115|990_1  48 GLKVVWLEGNGIGEISG--LEHNTKLRTLYLHENCIEELK--GLDTLTILDTLNVSKNYI 103
                79*************95..999*****************5..69*************976 PP

  == domain 2    score: 26.7 bits;  conditional E-value: 1.1e-09
  PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksisp.eafkgLpsLreLnLsgNrl 61 
                L +L++s+N +++i+   ++ ++ L++L +s+n+l+s ++ +    Lp+L+ L++++N++
  MMETSP1325-20131115|990_1  93 LDTLNVSKNYIRTIA--NLSACQALTTLIISNNKLSSADDiRHVLELPKLQTLDVQSNDI 150
                889***********9..699******************99678999************97 PP

  == domain 3    score: 32.2 bits;  conditional E-value: 2.1e-11
  PF13855.1   3 LkeLdLsnNrlkvipd.gaFkglsnLkvLdLsgnnlksisp.eafkgLpsLreLnLsgNr 60 
                L++L++snN+l++ +d +    l++L++Ld ++n +  ++  e+ +++psLr L+L+gN+
  MMETSP1325-20131115|990_1 115 LTTLIISNNKLSSADDiRHVLELPKLQTLDVQSNDIDDVEIlEVVSKMPSLRVLYLQGNP 174
                9*************98855555**************9998879****************6 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 0.86
  PF13855.1  11 NrlkvipdgaFkglsnLkvLd 31 
                N +++ ++++   ++ L++Ld
  MMETSP1325-20131115|990_1 178 N-IRYYRKTVIAACEGLRYLD 197
                6.8888888999999999997 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.5   4.2e+03       4      16 ..      49      61 ..      47      65 .. 0.76
   2 ?    2.9   0.1     0.052   1.4e+02       1      16 [.      68      83 ..      68      91 .. 0.83
   3 ?    1.4   0.1      0.15   4.1e+02       4      15 ..      93     104 ..      87     110 .. 0.78
   4 !    9.1   0.1   0.00051       1.4       1      16 [.     112     127 ..     112     131 .. 0.90
   5 !    9.3   0.0   0.00043       1.2       1      16 [.     137     152 ..     137     159 .. 0.89
   6 ?    3.1   0.0     0.043   1.2e+02       1      14 [.     162     175 ..     162     179 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.5
  PF13516.1  4 LtsLdLsnNqigd 16
               L++  L +N+ig 
  MMETSP1325-20131115|990_1 49 LKVVWLEGNGIGE 61
               55666899***97 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.052
  PF13516.1  1 lknLtsLdLsnNqigd 16
               +++L++L L  N i  
  MMETSP1325-20131115|990_1 68 NTKLRTLYLHENCIEE 83
               689*********9965 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.15
  PF13516.1   4 LtsLdLsnNqig 15 
                L +L++s+N i 
  MMETSP1325-20131115|990_1  93 LDTLNVSKNYIR 104
                4499*****985 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.00051
  PF13516.1   1 lknLtsLdLsnNqigd 16 
                ++ Lt+L +snN++++
  MMETSP1325-20131115|990_1 112 CQALTTLIISNNKLSS 127
                899**********987 PP

  == domain 5    score: 9.3 bits;  conditional E-value: 0.00043
  PF13516.1   1 lknLtsLdLsnNqigd 16 
                l++L++Ld+++N+i+d
  MMETSP1325-20131115|990_1 137 LPKLQTLDVQSNDIDD 152
                799***********99 PP

  == domain 6    score: 3.1 bits;  conditional E-value: 0.043
  PF13516.1   1 lknLtsLdLsnNqi 14 
                +++L++L L++N++
  MMETSP1325-20131115|990_1 162 MPSLRVLYLQGNPV 175
                589*********85 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0         5   1.4e+04       3      16 ..      49      62 ..      47      63 .. 0.76
   2 !    6.5   0.1    0.0042        11       1      16 [.      69      84 ..      69      87 .. 0.90
   3 ?   -0.5   0.0      0.88   2.4e+03       4      16 ..      94     106 ..      89     107 .. 0.81
   4 ?    3.8   0.0     0.034        92       2      14 ..     114     126 ..     113     131 .. 0.89
   5 ?    3.0   0.0     0.063   1.7e+02       1      15 [.     138     152 ..     138     155 .. 0.87
   6 ?    4.3   0.0     0.023        62       1      12 [.     163     174 ..     163     179 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 5
  PF13504.1  3 LkeLdLsgnrLtsL 16
               Lk+  L gn++ ++
  MMETSP1325-20131115|990_1 49 LKVVWLEGNGIGEI 62
               77778999999876 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0042
  PF13504.1  1 pnLkeLdLsgnrLtsL 16
               ++L++L+L+ n +++L
  MMETSP1325-20131115|990_1 69 TKLRTLYLHENCIEEL 84
               68*********99987 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.88
  PF13504.1   4 keLdLsgnrLtsL 16 
                 +L++s n++ ++
  MMETSP1325-20131115|990_1  94 DTLNVSKNYIRTI 106
                57899*9*99876 PP

  == domain 4    score: 3.8 bits;  conditional E-value: 0.034
  PF13504.1   2 nLkeLdLsgnrLt 14 
                 L++L +s+n+L 
  MMETSP1325-20131115|990_1 114 ALTTLIISNNKLS 126
                69*********96 PP

  == domain 5    score: 3.0 bits;  conditional E-value: 0.063
  PF13504.1   1 pnLkeLdLsgnrLts 15 
                p+L++Ld+ +n++++
  MMETSP1325-20131115|990_1 138 PKLQTLDVQSNDIDD 152
                78*********9875 PP

  == domain 6    score: 4.3 bits;  conditional E-value: 0.023
  PF13504.1   1 pnLkeLdLsgnr 12 
                p+L++L+L gn+
  MMETSP1325-20131115|990_1 163 PSLRVLYLQGNP 174
                79********98 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.15   4.2e+02       2      20 ..      49      66 ..      48      68 .. 0.85
   2 ?    4.5   0.1     0.017        46       1      15 [.      70      84 ..      70      90 .. 0.86
   3 ?    1.3   0.0      0.18   4.8e+02       3      21 ..      94     111 ..      93     112 .. 0.81
   4 !    5.7   0.3    0.0066        18       2      19 ..     115     140 ..     114     143 .. 0.77
   5 ?    3.1   0.0     0.048   1.3e+02       1      14 [.     139     152 ..     139     160 .. 0.85
   6 !    6.0   0.0    0.0052        14       1      15 [.     164     179 ..     164     193 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.15
                ESEEEETSSBCBCHHHHHH CS
  PF00560.28  2 LeeLdLsgNnltslppsls 20
                L++  L gN + +++  l+
   MMETSP1325-20131115|990_1 49 LKVVWLEGNGIGEISG-LE 66
                8999*******99987.65 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.017
                TESEEEETSSBCBCH CS
  PF00560.28  1 nLeeLdLsgNnltsl 15
                +L++L+L  N++++l
   MMETSP1325-20131115|990_1 70 KLRTLYLHENCIEEL 84
                69**********986 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.18
                 SEEEETSSBCBCHHHHHHH CS
  PF00560.28   3 eeLdLsgNnltslppslsn 21 
                  +L++s N + ++ + ls+
   MMETSP1325-20131115|990_1  94 DTLNVSKNYIRTIAN-LSA 111
                 68********99988.665 PP

  == domain 4    score: 5.7 bits;  conditional E-value: 0.0066
                 ESEEEETSSBCBC.........HHHHH CS
  PF00560.28   2 LeeLdLsgNnlts.........lppsl 19 
                 L++L +s+N+l+s         lp+ l
   MMETSP1325-20131115|990_1 115 LTTLIISNNKLSSaddirhvleLPK-L 140
                 99**********8777766666666.5 PP

  == domain 5    score: 3.1 bits;  conditional E-value: 0.048
                 TESEEEETSSBCBC CS
  PF00560.28   1 nLeeLdLsgNnlts 14 
                 +L++Ld+++N + +
   MMETSP1325-20131115|990_1 139 KLQTLDVQSNDIDD 152
                 79********9976 PP

  == domain 6    score: 6.0 bits;  conditional E-value: 0.0052
                 TESEEEETSSBCB.CH CS
  PF00560.28   1 nLeeLdLsgNnlt.sl 15 
                 +L++L+L+gN++  ++
   MMETSP1325-20131115|990_1 164 SLRVLYLQGNPVVkNI 179
                 79********887455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (641 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       797  (0.0582943); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.10u 0.38s 00:00:01.48 Elapsed: 00:00:00.95
# Mc/sec: 1616.91
//
Query:       MMETSP1325-20131115|995_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        68  (0.00497367); expected 273.4 (0.02)
Passed bias filter:                       68  (0.00497367); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 132.66
//
Query:       MMETSP1325-20131115|988_1  [L=794]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-16   59.0   1.3    6.8e-05   22.2   0.1    3.3  3  PF00569.12 Zinc finger, ZZ type
      3e-06   26.6   0.1    1.3e-05   24.6   0.0    1.9  2  PF00564.19 PB1 domain
  ------ inclusion threshold ------
       0.17   11.9   0.2       0.94    9.6   0.0    2.2  2  PF12013.3  Protein of unknown function (DUF3505)


Domain annotation for each model (and alignments):
>> PF00569.12  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.1   1.5e-08   6.8e-05       1      32 [.     136     166 ..     136     170 .. 0.94
   2 !   16.6   0.0     8e-07    0.0037       2      30 ..     205     232 ..     204     234 .. 0.94
   3 !   17.4   0.0   4.6e-07    0.0021       1      32 [.     500     530 ..     500     535 .. 0.89

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 1.5e-08
                 -SS-EE-TTT-S..EESSEEEESSSSS-EE-H CS
  PF00569.12   1 akkqykCniCkecpiigvRyhclkcsdYDLCq 32 
                 +++  +C+  ++cpiig+R++ l+  dYDLC 
   MMETSP1325-20131115|988_1 136 IHHGIECDRSGQCPIIGTRFK-LRGHDYDLCE 166
                 69******************9.9999*****6 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 8e-07
                 SS-EE-TTT-S..EESSEEEESSSSS-EE CS
  PF00569.12   2 kkqykCniCkecpiigvRyhclkcsdYDL 30 
                 +  ++C+  ++cpiig+Ry+ l+ ++YDL
   MMETSP1325-20131115|988_1 205 HYGVSCDRSGQCPIIGTRYK-LRGQNYDL 232
                 7889***************9.9******8 PP

  == domain 3    score: 17.4 bits;  conditional E-value: 4.6e-07
                 -SS-EE-TTT-S..EESSEEEESSSSS-EE-H CS
  PF00569.12   1 akkqykCniCkecpiigvRyhclkcsdYDLCq 32 
                 +++ ++C++ +  pi+g Ryh     dYDLC 
   MMETSP1325-20131115|988_1 500 IHFGVTCDKSGMSPIVGPRYHVPD-ADYDLCE 530
                 6999*****************766.69****7 PP

>> PF00564.19  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   2.8e-09   1.3e-05      31      81 ..      35      84 ..      27      87 .. 0.93
   2 ?   -1.4   0.0      0.38   1.7e+03      59      72 ..     523     536 ..     521     545 .. 0.81

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 2.8e-09
                HHHHCTB-GSSEEEEEEETTCSEEEE-SHHHHHHHHHHHHHTTTCSEEEEE CS
  PF00564.19 31 veqrfklsdedvklkYpdedgdlvtitsdeDLkeaveearslksktlrlhv 81
                ++++f+   +d +l Y d++gd +t+ +++++ +a+e a  ++ ktlr+ v
   MMETSP1325-20131115|988_1 35 LAEMFGKA-QDYTLTYVDDEGDTITVQTESEYVDALEVAADSNIKTLRMNV 84
                57889997.********************************999****988 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHHHT CS
  PF00564.19  59 deDLkeaveearsl 72 
                 d+D++ + ee+++l
   MMETSP1325-20131115|988_1 523 DADYDLCEEEYNKL 536
                 89*********987 PP

>> PF12013.3  Protein of unknown function (DUF3505)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00021      0.94      67      98 ..     126     156 ..      85     163 .. 0.67
   2 ?   -1.2   0.0      0.47   2.1e+03      76      97 ..     203     223 ..     177     226 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00021
  PF12013.3  67 alsepipgLpvydGllCqrakakCqyltrslk 98 
                + ++p p+L++++G+ C  ++ +C+ + ++ k
  MMETSP1325-20131115|988_1 126 SAEAPAPNLAIHHGIEC-DRSGQCPIIGTRFK 156
                6789*************.6779***9988875 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.47
  PF12013.3  76 pvydGllCqrakakCqyltrsl 97 
                +++ G+ C  ++ +C+ + ++ 
  MMETSP1325-20131115|988_1 203 AIHYGVSC-DRSGQCPIIGTRY 223
                5779****.67799*9988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       898  (0.0656817); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.26u 0.40s 00:00:01.66 Elapsed: 00:00:01.13
# Mc/sec: 1669.04
//
Query:       MMETSP1325-20131115|996_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.65
# Mc/sec: 446.09
//
Query:       MMETSP1325-20131115|1001_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.61
# Mc/sec: 212.14
//
Query:       MMETSP1325-20131115|1002_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.8   0.1       0.13   11.7   0.1    1.1  1  PF12934.2 FTO C-terminal domain


Domain annotation for each model (and alignments):
>> PF12934.2  FTO C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   9.3e-06      0.13     103     144 ..      57      99 ..      27     102 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.3e-06
                 --TTTTTTHHHHHHHHHHHHHHHHHHSSSGGG.---TTTS--- CS
   PF12934.2 103 keealdvllelLterkelReewaaRtrskiye.elPadqrPvd 144
                 +   ++   + L +r+  R+ w aR+r ++ + +lPa+q P+ 
  MMETSP1325-20131115|1002_1  57 PASRVQQAPTRLAARRTARRAWVARIRTGARRhALPASQAPTR 99 
                 55555666678999**************997537******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.63
# Mc/sec: 391.79
//
Query:       MMETSP1325-20131115|1004_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.4   0.7       0.17   11.1   0.5    1.1  1  PF06937.6 EURL protein
       0.17   11.2   0.4       0.31   10.4   0.3    1.4  1  PF12218.3 N terminal extension of bacteriophage endosialidase


Domain annotation for each model (and alignments):
>> PF06937.6  EURL protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.5   2.5e-05      0.17     196     262 ..      52     120 ..      18     123 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.5e-05
   PF06937.6 196 aesgseasiqrrekhysre..elnkktleelkqlkekllkqiqevfeeltavvqekdslaselhvrhva 262
                 + s++ +s  r    +sr   el + ++e lk+  e    +i+ v  el +  qe     sel++r   
  MMETSP1325-20131115|1004_1  52 SGSSAASSRGRSAMGKSRSmpELDSAEMERLKEEMEAKDARIKAVEGELINHAQESAREISELKLRLFE 120
                 2333334444555555554338999999999999999999************************99665 PP

>> PF12218.3  N terminal extension of bacteriophage endosialidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.3   4.5e-05      0.31       2      31 ..     126     156 ..     125     160 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 4.5e-05
                 ------B-.HHHHHHHHHHS-----B----- CS
   PF12218.3   2 vGDGvtdD.taalsavlaaspngkkidGrGl 31 
                  GDG +dD ++a sav++as     +dG+G 
  MMETSP1325-20131115|1004_1 126 AGDGSDDDmSEASSAVMSASEMSGTLDGTGT 156
                 69******446888999***********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       821  (0.0600497); expected 273.4 (0.02)
Passed bias filter:                      554  (0.0405208); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.63
# Mc/sec: 623.81
//
Query:       MMETSP1325-20131115|1005_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 334.73
//
Query:       MMETSP1325-20131115|1008_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.5   0.0      0.023   13.8   0.0    1.4  1  PF00036.27 EF hand
      0.017   14.6   0.0      0.018   14.5   0.0    1.2  1  PF04383.8  KilA-N domain
       0.11   12.2   0.0       0.11   12.2   0.0    1.1  1  PF06147.6  Protein of unknown function (DUF968)


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   5.1e-06     0.023      12      27 ..       2      17 ..       1      19 [. 0.90

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.1e-06
                TTSSEBEHHHHHHHHH CS
  PF00036.27 12 DgdGkIsfeEfkealk 27
                D+dG Is  Ef+e+l 
  MMETSP1325-20131115|1008_1  2 DHDGIISITEFCEWLV 17
                9************985 PP

>> PF04383.8  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.9e-06     0.018      13      63 ..       2      53 ..       1      76 [. 0.73

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.9e-06
   PF04383.8 13 vkdgyinatkllkaa.aektkrfddWlrnestkelleelerdnnisesqkk...k 63
                ++dg i++t  ++   +   +++++Wl+   ++e+l++ +r +   + qk     
  MMETSP1325-20131115|1008_1  2 DHDGIISITEFCEWLvG---QNMNQWLNEHAAQEILAAQARAKAAGGPQKRnpmA 53
                579************77...999*************9988886654443333332 PP

>> PF06147.6  Protein of unknown function (DUF968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.4e-05      0.11      32      71 ..       6      45 ..       1      68 [. 0.78

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 2.4e-05
   PF06147.6 32 eltlkqlcwfAvlndieealpeevlrrllkkekekvrgvs 71
                 +++ ++c + v +++ ++l e +++++l  ++ ++  ++
  MMETSP1325-20131115|1008_1  6 IISITEFCEWLVGQNMNQWLNEHAAQEILAAQARAKAAGG 45
                599**************************99988877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       500  (0.0365711); expected 273.4 (0.02)
Passed bias filter:                      442  (0.0323288); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|1009_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   13.5   0.2      0.068   12.9   0.2    1.3  1  PF13231.1 Dolichyl-phosphate-mannose-protein mannosyltransferase


Domain annotation for each model (and alignments):
>> PF13231.1  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2     5e-06     0.068      17      97 ..      62     149 ..      49     159 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5e-06
   PF13231.1  17 fGdselavrlvsalagllsilllyllarrlfgr.....raallavlllavvplflalsalltp..dallllfwllalyfllraleknk 97 
                 +    +++ +v a+++ + ++l+  + r+ fgr     r+al++++l+a+ p+   + +++t   +  + +f l  + +++ a++ ++
  MMETSP1325-20131115|1009_1  62 TNVDPYSFHCVNAVFHGVNSALVVPTTRLAFGRvahrdRIALFTAFLFATHPVHSEAVQNVTGraEECMAFFFLSGFIAFAAAVTQDA 149
                 455788999*********************99833333469***********999999966654488999999999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 778.82
//
Query:       MMETSP1325-20131115|1006_1  [L=393]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-14   53.0   0.0    6.1e-14   52.2   0.0    1.4  1  PF00005.22 ABC transporter
    1.4e-11   44.7   0.0    6.8e-09   35.9   0.0    2.1  2  PF13304.1  AAA domain
    2.9e-05   23.1   0.0     0.0016   17.4   0.0    2.1  2  PF13175.1  AAA ATPase domain
     0.0079   15.5   0.1      0.018   14.3   0.0    1.5  2  PF00448.17 SRP54-type protein, GTPase domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.0   1.8e-17   6.1e-14       1     117 [.      46     163 ..      46     164 .. 0.93

  Alignments for each domain:
  == domain 1    score: 52.2 bits;  conditional E-value: 1.8e-17
                 HHHHHHHTTSS------EEE-...--BGGGB-HHHHH.EEEE-------.--BHHHHHH----S--.....-HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievd.ndrkdlesdkleklr.igyipqdpllfpeltvrenldmakeekk.....tdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPt 117
                 +T l +ltg l+ t+g  +++ +d+      + ++++ +gy+pq  +l   +t re+l+ + + k       d+ + ++l +vgl+ ++dk   +++SgG k++++ A al+ +p+++lLDEP 
  MMETSP1325-20131115|1006_1  46 TTTLSILTGDLDRTSGVAQIAgTDV-----NDPASMQlMGYCPQVDPLLDLMTGRETLRLFGRLKGiptgeLDAIVSDILFRVGLTVFADK-VSGSYSGGNKRKLSFAVALIAEPPVILLDEPS 163
                 799******************4455.....44555667***********************99988*************************.*******************************7 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.1    0.0016       5.5       4      19 ..      37      52 ..      34      66 .. 0.88
   2 !   35.9   0.0     2e-12   6.8e-09     237     299 ..     136     194 ..      95     197 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0016
   PF13304.1  4 iiGpNgsGKSnlLkal 19
                + G Ng+GK++ L++l
  MMETSP1325-20131115|1006_1 37 FLGINGAGKTTTLSIL 52
                7899**********99 PP

  == domain 2    score: 35.9 bits;  conditional E-value: 2e-12
   PF13304.1 237 lSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHSp 299
                  S G kr l+++ al+  +   +v+l+DEp +g++P + r++++ + + ++ +  +++TTHS 
  MMETSP1325-20131115|1006_1 136 YSGGNKRKLSFAVALIAEP---PVILLDEPSTGMDPVARRQMWDAIASAAR-NRSVVLTTHSM 194
                 299****************...*****************************.**********4 PP

>> PF13175.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.6   0.0    0.0071        24      28      43 ..      38      54 ..      36      78 .. 0.82
   2 !   17.4   0.0   4.7e-07    0.0016     372     411 ..     156     193 ..     129     195 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.0071
   PF13175.1 28 iGeNgsGKttILeal.e 43
                 G+Ng+GKtt L++l  
  MMETSP1325-20131115|1006_1 38 LGINGAGKTTTLSILtG 54
                69***********9952 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 4.7e-07
   PF13175.1 372 IlliDEPeahlhptlqkellefLkelakknniqiiitTHs 411
                 ++l+DEP + ++p +++++ + + ++a+  n  +++tTHs
  MMETSP1325-20131115|1006_1 156 VILLDEPSTGMDPVARRQMWDAIASAAR--NRSVVLTTHS 193
                 9***************************..*********9 PP

>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   5.3e-06     0.018       6      49 ..      37      79 ..      33     100 .. 0.83
   2 ?   -3.4   0.0       1.5   5.1e+03     110     133 ..     311     334 ..     302     340 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 5.3e-06
                EE-------TTTHHHHHHHHHHT---EEEEE--TSSHHHHHHHH CS
  PF00448.17  6 lvGlqGaGKTTtlaKLAallkkegkkvllvaaDtfRaaAveQLk 49
                ++G++GaGKTTtl+ L   l +      ++ +D+  +a + QL 
  MMETSP1325-20131115|1006_1 37 FLGINGAGKTTTLSILTGDLDRTSGVAQIAGTDVNDPASM-QLM 79
                79***************99999999999999999887765.555 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 1.5
                 HHSSSSEEEEEEETTS-HCHHHHH CS
  PF00448.17 110 kvlkpdevllvldatigqealkqa 133
                 ++ +++e l v+d +i q  l+q+
  MMETSP1325-20131115|1006_1 311 SIEAAKERLSVMDYAISQGSLEQV 334
                 455778888889988888887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.62
# Mc/sec: 1518.98
//
Query:       MMETSP1325-20131115|1012_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-13   49.3   0.4    7.4e-13   48.3   0.3    1.4  1  PF00415.13 Regulator of chromosome condensation (RCC1) repeat
  ------ inclusion threshold ------
      0.024   14.0   0.1      0.032   13.7   0.0    1.2  1  PF02174.12 PTB domain (IRS-1 type)


Domain annotation for each model (and alignments):
>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   0.3   1.1e-16   7.4e-13       4      45 ..       9      49 ..       8      51 .. 0.97

  Alignments for each domain:
  == domain 1    score: 48.3 bits;  conditional E-value: 1.1e-16
                EEEE---------.--------S-EE-GGG------EEE--- CS
  PF00415.13  4 VysWGrndyGqLGkggseenvlvPvkveglsgvrvvqvacGg 45
                +++WG++  GqLG ++s e++ vP+ ve+l ++ v qvacG+
  MMETSP1325-20131115|1012_1  9 LWTWGCGMLGQLG-HNSFEDCYVPKYVEMLGSKVVRQVACGA 49
                8************.***************************7 PP

>> PF02174.12  PTB domain (IRS-1 type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.7e-06     0.032      62      89 ..      56      83 ..      37      93 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.7e-06
  PF02174.12 62 fsfEaGRrcesGeGeftfetkdaeeife 89
                 +fEaGR c  G+  +  ++++a+ +++
  MMETSP1325-20131115|1012_1 56 STFEAGRGCCEGNCGLGVQASQAQALHQ 83
                58************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.87
# Mc/sec: 272.69
//
Query:       MMETSP1325-20131115|1013_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-16   59.6   0.0    2.9e-16   59.3   0.0    1.1  1  PF01926.18 50S ribosome-binding GTPase
    2.7e-07   29.9   0.0    3.4e-07   29.5   0.0    1.1  1  PF02421.13 Ferrous iron transport protein B
  ------ inclusion threshold ------
       0.13   10.9   0.0       0.17   10.5   0.0    1.2  1  PF03308.11 ArgK protein


Domain annotation for each model (and alignments):
>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   0.0   6.3e-20   2.9e-16       1      86 [.      22     123 ..      22     124 .] 0.77

  Alignments for each domain:
  == domain 1    score: 59.3 bits;  conditional E-value: 6.3e-20
                 EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE...............ETTE......EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEE CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev...............kkek......iilvDtPGiiegasedkeiegikkylekveradvlllvvd 86 
                 ++++vG+pNvGKS+L+n +t++ a+  +++p++T d+   +                +         ++++D++G+i+ga+e+  +   + +l ++  +d++ +v+ 
  MMETSP1325-20131115|1013_1  22 KMGLVGLPNVGKSSLFNLMTEQ-AVPAENFPFCTIDPSDAKCpvpdqrfkflcdlynP--PskvpavLTVTDIAGLIKGAAEGA-G-LGNAFLSHIAAVDGIYHVIR 123
                 589*****************75.88************553334444444555554431..044566458**********99999.4.4678**************96 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   7.6e-11   3.4e-07       2      51 ..      22      71 ..      21      76 .. 0.90

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 7.6e-11
                EEEEE--TT---HHHHHHH----TB--------S--BB--EEETTEEEEE CS
  PF02421.13  2 tvalvGnpnvGKttlfnaltgakqkvgNwpGvTVekkegklklkgkevei 51
                ++ lvG pnvGK++lfn +t++     N+p  T++ + +k+ + ++++++
  MMETSP1325-20131115|1013_1 22 KMGLVGLPNVGKSSLFNLMTEQAVPAENFPFCTIDPSDAKCPVPDQRFKF 71
                5789**********************************999988888764 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   3.7e-05      0.17      28      68 ..      19      58 ..       8      62 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 3.7e-05
                --EEE--B-------HHHHHH---HHHH----EEEEEE--- CS
  PF03308.11 28 ralvvGltGvPGaGkstlveklikelrrrGkrvavlavDPs 68
                + l +Gl G P +Gks l + ++++++ + ++     +DPs
  MMETSP1325-20131115|1013_1 19 NNLKMGLVGLPNVGKSSLFNLMTEQAVPA-ENFPFCTIDPS 58
                66789**************9888877654.56667777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.74
# Mc/sec: 401.55
//
Query:       MMETSP1325-20131115|1015_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0001   20.9   0.1     0.0001   20.9   0.0    1.1  1  PF04791.11 LMBR1-like membrane protein
  ------ inclusion threshold ------
      0.011   14.9   0.7      0.013   14.7   0.5    1.0  1  PF03706.8  Uncharacterised protein family (UPF0104)
       0.08   11.2   1.6      0.095   11.0   1.1    1.1  1  PF00909.16 Ammonium Transporter Family


Domain annotation for each model (and alignments):
>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.3e-08    0.0001     131     194 ..      13      71 ..       3     125 .. 0.75

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 2.3e-08
  PF04791.11 131 lvllvllavisavldnsesllslwevflplvyScvsflGllLlliltgyGlaelfsslwkllvr 194
                  ++l+ l+v+s       + +     ++  ++S ++  Gl+ +++l+gyGl+e ++ l k+   
  MMETSP1325-20131115|1015_1  13 VMFLIFLGVVSQS-----GNYHGSDALKITLMSVANSYGLFVIVFLLGYGLVEFPKFLFKFGDD 71 
                 3456667777777.....99999999******************************99998766 PP

>> PF03706.8  Uncharacterised protein family (UPF0104)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.5   2.8e-06     0.013     114     188 ..       7      90 ..       3     105 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.8e-06
   PF03706.8 114 ldllalllfallalllflsseliallllvlllillaalvlllillirl..........nlrffkklerkkrleerlarlidsfke 188
                 ++ +al+ f+++++++++s++  +  +l ++l+ +a    l++++++l          ++ f     rk +++ r+a +i   +e
  MMETSP1325-20131115|1015_1   7 MAAAALVMFLIFLGVVSQSGNYHGSDALKITLMSVANSYGLFVIVFLLgyglvefpkfLFKFGDDQGRKVQMRARIALAIS-AQE 90 
                 5678899999999999********************************999999774444444444444444444443333.333 PP

>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.1   2.1e-05     0.095       4      58 ..       7      61 ..       5     106 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 2.1e-05
                HHHHHHHHHH.----TTT---------HHHHHHHHHHHHHHHHHHHHH---TTT-- CS
  PF00909.16  4 llaaalvifm.qagfalleaglvrsknvlnilvknlldlavvvllyvlfGyslafg 58
                ++aaalv+f    g++  ++g+    ++l+i ++++      +++ +l+Gy+l+  
  MMETSP1325-20131115|1015_1  7 MAAAALVMFLiFLGVVS-QSGNYHGSDALKITLMSVANSYGLFVIVFLLGYGLVEF 61
                68999****98888876.9999999999**99999999998899999****99833 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       544  (0.0397894); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.84
# Mc/sec: 385.13
//
Query:       MMETSP1325-20131115|1019_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.61
# Mc/sec: 424.27
//
Query:       MMETSP1325-20131115|1021_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.19s 00:00:00.51 Elapsed: 00:00:00.51
# Mc/sec: 361.80
//
Query:       MMETSP1325-20131115|1020_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0071   16.2   0.0        1.5    8.7   0.0    2.1  2  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00011       1.5      35      55 ..       1      21 [.       1      28 [. 0.90
   2 !    5.7   0.0   0.00094        13      50      65 ..      56      71 ..      55      72 .] 0.89

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00011
                EEEECCTTSS-HHHHHHHTTS CS
  PF00254.23 35 fefkvGsgqvikgleeglegm 55
                f+++ G g vi g+++ ++g 
  MMETSP1325-20131115|1020_1  1 FTYQAGVGGVITGWDQVILGA 21
                68899*************997 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.00094
                HHHTTSBCTEEEEEEE CS
  PF00254.23 50 eglegmkvGekrtlti 65
                +g +gm+vGe r l+i
  MMETSP1325-20131115|1020_1 56 QGCLGMQVGEVRLLEI 71
                6789*********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.63
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|1022_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-05   22.7   0.1    0.00056   19.3   0.1    2.0  2  PF12799.2 Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.012   15.2   0.0      0.032   13.8   0.0    1.7  1  PF13855.1 Leucine rich repeat
      0.041   13.5   0.2       0.91    9.2   0.0    2.4  2  PF07725.7 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.048   2.2e+02      23      36 ..      28      41 ..      15      48 .. 0.77
   2 !   19.3   0.1   1.2e-07   0.00056       2      26 ..      52      75 .]      52      75 .] 0.98

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.048
   PF12799.2 23 LpnLktLnLsnNpi 36
                +++L +L++ +  i
  MMETSP1325-20131115|1022_1 28 CTKLVELYVHGEAI 41
                79999999877555 PP

  == domain 2    score: 19.3 bits;  conditional E-value: 1.2e-07
   PF12799.2  2 nLevLdLsnNnIkdlppelanLpnL 26
                nLe L +++++Ik+++p +a+L++L
  MMETSP1325-20131115|1022_1 52 NLEILKIRGSKIKSVEP-IASLQKL 75
                9****************.******9 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   7.1e-06     0.032      20      44 ..      46      70 ..      29      75 .] 0.73

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 7.1e-06
   PF13855.1 20 aFkglsnLkvLdLsgnnlksispea 44
                + +gl nL+ L++ g ++ks++p a
  MMETSP1325-20131115|1022_1 46 FVQGLGNLEILKIRGSKIKSVEPIA 70
                7799*****************9954 PP

>> PF07725.7  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.042   1.9e+02       1       8 [.      30      37 ..      30      38 .. 0.83
   2 ?    9.2   0.0    0.0002      0.91       1      14 [.      52      65 ..      52      66 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.042
   PF07725.7  1 nLVeLnlr 8 
                +LVeL ++
  MMETSP1325-20131115|1022_1 30 KLVELYVH 37
                7****987 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0002
   PF07725.7  1 nLVeLnlrySklek 14
                nL +L++r+Sk+++
  MMETSP1325-20131115|1022_1 52 NLEILKIRGSKIKS 65
                899*********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.60
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|1016_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00092   18.8   2.1    0.00092   18.8   1.5    1.4  2  PF02009.11 Rifin/stevor family
     0.0032   17.1   3.2      0.093   12.4   0.0    2.4  2  PF11309.3  Protein of unknown function (DUF3112)
  ------ inclusion threshold ------
       0.31   10.7   3.5       0.65    9.6   2.5    1.5  1  PF06084.6  Cytomegalovirus TRL10 protein
       0.56    8.3   7.7        1.5    6.9   0.2    2.3  2  PF02480.11 Alphaherpesvirus glycoprotein E
       0.59    9.7  10.0        1.2    8.7   7.0    1.5  1  PF11921.3  Domain of unknown function (DUF3439)
          1    8.5  11.9        1.7    7.7   8.2    1.3  1  PF11359.3  Glycoprotein UL132


Domain annotation for each model (and alignments):
>> PF02009.11  Rifin/stevor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   0.7       5.3   1.2e+04     257     270 ..      43      56 ..      36      63 .. 0.57
   2 !   18.8   1.5     4e-07   0.00092     205     279 ..     167     237 ..     137     239 .. 0.64

  Alignments for each domain:
  == domain 1    score: -4.6 bits;  conditional E-value: 5.3
  PF02009.11 257 aIiasviailiIvl 270
                 a +a ++a++++ +
  MMETSP1325-20131115|1016_1  43 AAVAVAAAVVVVAA 56 
                 44455555555544 PP

  == domain 2    score: 18.8 bits;  conditional E-value: 4e-07
  PF02009.11 205 kaelsilssktavesaakdaakaakkaeedvteaikkketalieskfaslttaIiasviailiIvlvmlIIylil 279
                 +++ ++ ++ t++++a+ +a+++a++a+ ++t  + + e  +     a   +aI+  v+++l+ v v++ ++l+l
  MMETSP1325-20131115|1016_1 167 SIIITTTTAITTTTTATATATATATDAARSTTTIVVACEYGAG----AGAGSAIMLVVVLVLVLVSVLVLVLLVL 237
                 3333333333344444555555555554444444444443333....55899*********************98 PP

>> PF11309.3  Protein of unknown function (DUF3112)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   4.1e-05     0.093      58     120 ..      43     193 ..      31     206 .. 0.67
   2 ?   -0.6   4.2       0.4   9.2e+02      16      70 ..     216     268 ..     210     270 .] 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.1e-05
   PF11309.3  58 illiallpvilillayllPrkptwiesFgkf..........................................................................................klrvkvliilittlllligaifravtafqprr 120
                 +++  +++v+++++a++++++  +i+                                                                                               + ++  +ii++tt++ +++++++++ta  ++ 
  MMETSP1325-20131115|1016_1  43 AAVAVAAAVVVVAAAAVVKHQ--KIQALCSHpmfavpggrlawprtwpyrsaivrggghaalcfvrgrplptslparalgcarycdrcnlvpggralkrrarvclgftkapalhnhsyptrNPASVSIIITTTTAITTTTTATATATATATDA 193
                 333333334444444444443..3333322233466666667777777777777788888888888888888888888888888888888888888888888888888888888888888788888889999999999999999999877643 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.4
   PF11309.3  16 lyllivgvlimaiitaaviylytlsektrrqakkvvlaasvlilliallpvilil 70 
                 ++l++v+vl++  +++ v  l +l  ++ r a +vvl+++ ++ll+a+++++ +l
  MMETSP1325-20131115|1016_1 216 IMLVVVLVLVL--VSVLVLVLLVLVLEVGRCAFDVVLMGCDVALLVAAAALSGVL 268
                 44555555555..888888888888888888888888888888888888777665 PP

>> PF06084.6  Cytomegalovirus TRL10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.5   0.00028      0.65      28      77 ..     177     227 ..     161     233 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00028
   PF06084.6  28 netsttgngskchakckcrvtepitvlgaysa.wgagsfvatlivllvvff 77 
                  +t+t++++++  a+   r t  i v   y a  gags +  ++vl++v+ 
  MMETSP1325-20131115|1016_1 177 TTTTTATATATATATDAARSTTTIVVACEYGAgAGAGSAIMLVVVLVLVLV 227
                 345555566677778888************984699999887777665543 PP

>> PF02480.11  Alphaherpesvirus glycoprotein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2   0.00064       1.5     325     378 ..       9      62 ..       3      70 .. 0.68
   2 ?    4.3   1.6    0.0038       8.7     340     374 ..     206     240 ..     152     249 .. 0.53

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00064
  PF02480.11 325 dseesdppatpapsaepakpeartapyllllaavlgaavlllvvlllvlvcvtk 378
                 d++ ++++ +p ++ ++ +++++ ++  l +++++++av+ +vv++++ ++v+ 
  MMETSP1325-20131115|1016_1   9 DANARPQSLAPQRPPSRPPRQPPCRRSGLAITFAAAVAVAAAVVVVAAAAVVKH 62 
                 556666777776666666677777777777777777777777777777776654 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0038
  PF02480.11 340 epakpeartapyllllaavlgaavlllvvlllvlv 374
                  +a+ +a++a +l+++++++ + vl+lv+l+lvl 
  MMETSP1325-20131115|1016_1 206 YGAGAGAGSAIMLVVVLVLVLVSVLVLVLLVLVLE 240
                 23333444444444555554444555555444444 PP

>> PF11921.3  Domain of unknown function (DUF3439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   7.0   0.00052       1.2      42     109 ..     167     233 ..     155     242 .. 0.44

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00052
   PF11921.3  42 siicpttttttttttttmpttttlptttkmsmvkvplvppeafgrvmna..cayfpsyiflhlvhglaav 109
                 sii  ttt+ ttttt+t  t+t   t+t  +     +v    +g    a     +   + l lv  l  v
  MMETSP1325-20131115|1016_1 167 SIIITTTTAITTTTTATA-TAT--ATATDAARSTTTIVVACEYGAGAGAgsAIMLVVVLVLVLVSVLVLV 233
                 555554444444443333.333..3333333333344444444433333002333333344444444444 PP

>> PF11359.3  Glycoprotein UL132
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   8.2   0.00075       1.7       2      69 ..     171     238 ..     169     250 .. 0.59

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00075
   PF11359.3   2 tssttvpasttasstvtsatssetsvstnvttaleastqkepndvvekvlaivvyivsgvsilsllvv 69 
                 t++t+++++tta++t t+++++     t +  a e  + +  ++ ++ v+ +v+ +vs   ++ l++v
  MMETSP1325-20131115|1016_1 171 TTTTAITTTTTATATATATATDAARSTTTIVVACEYGAGAGAGSAIMLVVVLVLVLVSVLVLVLLVLV 238
                 55566666666666655433344444456777777788888888888777666655554444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1265  (0.0925249); expected 273.4 (0.02)
Passed bias filter:                      454  (0.0332066); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.72u 0.40s 00:00:01.12 Elapsed: 00:00:01.03
# Mc/sec: 628.17
//
Query:       MMETSP1325-20131115|1023_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        47  (0.00343768); expected 273.4 (0.02)
Passed bias filter:                       47  (0.00343768); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.37s 00:00:00.63 Elapsed: 00:00:00.56
# Mc/sec: 136.93
//
Query:       MMETSP1325-20131115|1011_1  [L=921]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-09   36.5   0.0    5.1e-09   35.5   0.0    1.6  1  PF02209.14 Villin headpiece domain
    0.00029   19.7   0.0    0.00042   19.1   0.0    1.2  1  PF02181.18 Formin Homology 2 Domain


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   7.5e-13   5.1e-09       1      35 [.     886     920 ..     886     921 .] 0.98

  Alignments for each domain:
  == domain 1    score: 35.5 bits;  conditional E-value: 7.5e-13
                 GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT- CS
  PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgL 35 
                 YL d dF ++ gM +e F+ LP+WK++ +Kk +gL
  MMETSP1325-20131115|1011_1 886 YLDDADFAQAIGMQREVFDTLPQWKRDSIKKTAGL 920
                 9********************************99 PP

>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   6.2e-08   0.00042     150     254 ..     268     383 ..     256     478 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 6.2e-08
                 HCCCTCTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH...-HHHHHHHHHHHH---TTT-CCT......T.G------GGGGGGCCCSB-S.TTTSBHHHHHHHHHHT CS
  PF02181.18 150 lelvkiprleeRleallfksefeeeveelkrkletleaaseeLre...seklkklLeliLalGNymNggtr......r.gqAkGFkLdsLlkLsdvKst.dnkttLLhfvvkivee 254
                  +l++ p++  Rleal   ++  +++++   kl+ l  a ++L++   +++l +l+ +i ++G  + +g            A GF+L+sL kL++v  +    +tLLh+v+ + ++
  MMETSP1325-20131115|1011_1 268 SDLARLPNMDLRLEALSNAISARQQLRDECDKLQRLAIALDHLNSaagRQELARLFGTIRTVGHALLSGPEseteprPsTAARGFTLSSLSKLKNVTCRyHPTFTLLHHVAYLWAK 383
                 5678899999*****************************999987444689***************998652222212368******************9999*******988777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (921 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.25u 0.33s 00:00:01.58 Elapsed: 00:00:00.91
# Mc/sec: 2425.32
//
Query:       MMETSP1325-20131115|1029_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:01.04
# Mc/sec: 311.07
//
Query:       MMETSP1325-20131115|1030_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       77  (0.00563195); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.70
# Mc/sec: 198.56
//
Query:       MMETSP1325-20131115|1032_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   14.0   6.1      0.029   13.9   1.4    2.3  2  PF13855.1  Leucine rich repeat
      0.082   12.4   0.0      0.093   12.2   0.0    1.0  1  PF10051.4  Uncharacterized protein conserved in archaea (DUF2286)
       0.11   12.3   1.5        1.2    9.0   0.2    2.3  2  PF05725.7  FNIP Repeat
       0.12   12.3   8.4         39    4.7   0.1    4.1  4  PF00560.28 Leucine Rich Repeat
       0.26   10.8  11.9    4.8e+02    0.4   8.2    3.1  1  PF12799.2  Leucine Rich repeats (2 copies)
        6.5    7.0  13.0         23    5.3   0.4    3.8  2  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.15   3.4e+02      50      61 .]       3      14 ..       2      14 .. 0.72
   2 ?   13.9   1.4   1.3e-05     0.029       2      59 ..      24      79 ..      23      80 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.15
   PF13855.1 50 sLreLnLsgNrl 61
                s++ LnL ++++
  MMETSP1325-20131115|1032_1  3 SVTNLNLASTNI 14
                677888888776 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 1.3e-05
   PF13855.1  2 nLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                ++++L+L+++ +l+ +i  +++k+++ L++LdL  ++  + + ++fk++ +++ LnL+++
  MMETSP1325-20131115|1032_1 24 SITDLNLKSCtELEgDI--ESLKDCP-LQKLDLPLCRELTGNIKVFKNM-NIETLNLQSC 79
                6799****994555444..6******.*******5555567778*****.********98 PP

>> PF10051.4  Uncharacterized protein conserved in archaea (DUF2286)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.1e-05     0.093      19      74 ..      14      69 ..       3      75 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.1e-05
   PF10051.4 19 vegdlaevvkdvaaeaLkeWnpessDfiilrdklevryplplkpelleklkkykvk 74
                +eg++++  ++++   Lk+  + + D+  l+d    ++ lpl +el  ++k +k  
  MMETSP1325-20131115|1032_1 14 IEGNIKDLPQSITDLNLKSCTELEGDIESLKDCPLQKLDLPLCRELTGNIKVFKNM 69
                7999**********************************************988765 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.2   0.00054       1.2      13      42 ..       3      31 ..       2      36 .. 0.82
   2 ?    2.5   0.0     0.056   1.3e+02       5      19 ..      48      76 ..      45      80 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00054
   PF05725.7 13 nleiLilgrdFnqkiligsLPnSlkeLyFg 42
                ++++L+l  + n + +i  LP+S++ L++ 
  MMETSP1325-20131115|1032_1  3 SVTNLNL-ASTNIEGNIKDLPQSITDLNLK 31
                7888899.8888888899999999998874 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.056
   PF05725.7  5 ikigeLP..............snleiLil 19
                +++  LP              +n+e L+l
  MMETSP1325-20131115|1032_1 48 LQKLDLPlcreltgnikvfknMNIETLNL 76
                56666777777778888888899999998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.023        51       2      17 ..       4      23 ..       3      28 .. 0.73
   2 ?    4.7   0.1     0.017        39       2      21 ..      25      45 ..      24      46 .. 0.83
   3 ?    3.6   0.0     0.039        89       2      21 ..      48      68 ..      47      69 .. 0.85
   4 ?    3.5   0.1     0.041        94       1      10 [.      70      79 ..      70      80 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.023
                ESEEEETSSBCB.C...HHH CS
  PF00560.28  2 LeeLdLsgNnlt.s...lpp 17
                 + L+L ++n++ +   lp 
  MMETSP1325-20131115|1032_1  4 VTNLNLASTNIEgNikdLPQ 23
                5789*****99977555555 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.017
                ESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsn 21
                ++ L+L ++  l+ ++ + l+ 
  MMETSP1325-20131115|1032_1 25 ITDLNLKSCtELEgDIES-LKD 45
                678*********999998.765 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.039
                ESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsn 21
                L++LdL  +  lt ++   ++n
  MMETSP1325-20131115|1032_1 48 LQKLDLPLCrELTgNIKV-FKN 68
                899***999999988888.877 PP

  == domain 4    score: 3.5 bits;  conditional E-value: 0.041
                TESEEEETSS CS
  PF00560.28  1 nLeeLdLsgN 10
                n+e+L+L+++
  MMETSP1325-20131115|1032_1 70 NIETLNLQSC 79
                789*****99 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   8.2      0.21   4.8e+02       2      23 ..       3      28 ..       2      80 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.21
   PF12799.2  2 nLevLdLsnN....nIkdlppelanL 23
                + + L+L+++    nIkdlp ++  L
  MMETSP1325-20131115|1032_1  3 SVTNLNLASTniegNIKDLPQSITDL 28
                56789999984444467788774433 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   4.2       0.2   4.7e+02       2      16 ..       2      16 ..       1      62 [. 0.86
   2 ?    5.3   0.4      0.01        23       3      12 ..      70      79 ..      68      80 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.2
   PF13516.1  2 knLtsLdLsnNqigd 16
                k+ t+L+L +++i +
  MMETSP1325-20131115|1032_1  2 KSVTNLNLASTNIEG 16
                577899999999865 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.01
   PF13516.1  3 nLtsLdLsnN 12
                n+++L+L+++
  MMETSP1325-20131115|1032_1 70 NIETLNLQSC 79
                89******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.75
# Mc/sec: 258.81
//
Query:       MMETSP1325-20131115|1034_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-13   50.7   0.2    1.5e-13   50.5   0.1    1.2  1  PF08544.8  GHMP kinases C terminal
  ------ inclusion threshold ------
      0.025   13.6   0.2      0.048   12.7   0.1    1.5  1  PF11133.3  Head fiber protein
      0.091   12.3   1.2       0.45   10.1   0.2    2.4  3  PF00936.14 BMC domain


Domain annotation for each model (and alignments):
>> PF08544.8  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.1   3.4e-17   1.5e-13       4      81 ..      44     120 ..      26     124 .. 0.86

  Alignments for each domain:
  == domain 1    score: 50.5 bits;  conditional E-value: 3.4e-17
   PF08544.8   4 aleegdiellgellnenqlseplayvgilspelrellealeelGalgaklsGaGgGptvfalf.kdkddaeqvaralae 81 
                 al+ gd+++lg+ +  n+   +l+++ +++ el++l+ a++++Galgak+ G+G G+  fa++ +d++ +e v +al++
  MMETSP1325-20131115|1034_1  44 ALLGGDWKTLGQTADVNHA--LLQELSVSCKELDDLVTAARAAGALGAKMAGTGRGGLMFAVCgDDEAVQESVFQALSA 120
                 5666***************..999***************************************6666666666666655 PP

>> PF11133.3  Head fiber protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1     1e-05     0.048     229     275 ..      36      86 ..       5      88 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1e-05
   PF11133.3 229 YtLpaattttlGG....vkkaaavsdstatdvavsvkdfnsLltalknaGi 275
                   Lp a t+ lGG      ++a v+++   +++vs k++++L+ta + aG 
  MMETSP1325-20131115|1034_1  36 EVLPVAETALLGGdwktLGQTADVNHALLQELSVSCKELDDLVTAARAAGA 86 
                 4599********954444589*****************************7 PP

>> PF00936.14  BMC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.15   6.8e+02      41      65 ..       8      32 ..       3      41 .. 0.75
   2 ?   -2.2   0.0      0.68   3.1e+03      46      55 ..      54      63 ..      53      70 .. 0.83
   3 ?   10.1   0.2   9.9e-05      0.45      33      63 ..      90     122 ..      74     129 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.15
  PF00936.14 41 tiiitGdvaaVraAveaaveaaeek 65
                t  + Gdv a + A  a  ea+e++
  MMETSP1325-20131115|1034_1  8 TTEVVGDVKARKDADPAWYEALEKR 32
                5568899999998888888888884 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.68
  PF00936.14 46 GdvaaVraAv 55
                G +a+V++A+
  MMETSP1325-20131115|1034_1 54 GQTADVNHAL 63
                7889999986 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 9.9e-05
  PF00936.14  33 esvs..ggkvtiiitGdvaaVraAveaaveaae 63 
                 + ++   g++++ + Gd +aV+++v +a++a+ 
  MMETSP1325-20131115|1034_1  90 KMAGtgRGGLMFAVCGDDEAVQESVFQALSAVA 122
                 4444324589***************99998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 581.34
//
Query:       MMETSP1325-20131115|1024_1  [L=501]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.88
# Mc/sec: 1364.29
//
Query:       MMETSP1325-20131115|1025_1  [L=386]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-15   55.5   0.0    6.6e-15   54.8   0.0    1.2  1  PF00069.20 Protein kinase domain
    4.7e-05   22.5   0.0    7.5e-05   21.8   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
    0.00069   18.6   0.0     0.0012   17.8   0.0    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.011   15.3   0.5      0.026   14.1   0.3    1.7  1  PF13855.1  Leucine rich repeat
      0.018   14.9   3.5        6.6    7.0   0.1    3.9  3  PF00560.28 Leucine Rich Repeat
      0.021   14.0   0.0      0.088   12.0   0.0    2.0  2  PF01163.17 RIO1 family
      0.021   14.7   3.4         12    6.2   0.0    3.9  4  PF13516.1  Leucine Rich repeat
      0.033   13.7   0.1      0.048   13.2   0.1    1.5  1  PF01636.18 Phosphotransferase enzyme family
      0.054   13.0   0.4        0.7    9.4   0.1    2.4  3  PF12799.2  Leucine Rich repeats (2 copies)
        2.8    8.4   5.3         19    5.8   0.5    4.1  4  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.8   0.0   4.8e-18   6.6e-15      72     171 ..     276     375 ..     263     383 .. 0.85

  Alignments for each domain:
  == domain 1    score: 54.8 bits;  conditional E-value: 4.8e-18
                 EEEEEEE--SC-EHHHHHHHHCCB..-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHH CS
  PF00069.20  72 elylvleyveggdlfdllkkegkl..seeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvll 171
                  ++lv++ + + +l+ ll++++    +  ++ ki++ ++e ++ lHs +++H DLKp NiLl ++g++ ++D+  +       +  ++  g++ Y APEv +
  MMETSP1325-20131115|1025_1 276 PYVLVMDQATQ-SLHGLLASQRVAgnDPVTAIKIFRRVVEQVQVLHSVRLLHFDLKPRNILLLEDGSVVLCDLDASMR-LGITRGQDEKPGSSAYYAPEVAR 375
                 34588998877.9999999555556688999*********************************************98.77888889999**********87 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   5.5e-08   7.5e-05      76     177 ..     277     374 ..     269     381 .. 0.82

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 5.5e-08
                 EEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHH CS
  PF07714.12  76 llivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEsl 177
                 +++v++ +   +L+ +L +++    +  + +k+   + + ++ L+s +l+H dL  rN+Ll e+  v ++D   + ++     ++ ++e+  +  ++apE+ 
  MMETSP1325-20131115|1025_1 277 YVLVMDQA-TQSLHGLLASQRVAGNDPVTAIKIFRRVVEQVQVLHSVRLLHFDLKPRNILLLEDGSVVLCDLDASMRL---GITRGQDEKPGSSAYYAPEVA 374
                 55555544.44788888888777888889999***************************************9888777...566777777888899999986 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   8.5e-07    0.0012     101     170 ..     284     352 ..     270     362 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 8.5e-07
   PF06293.9 101 gaqdLaeilakwae..laeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarr 170
                  +q+L  +la+ +    +     +++++v + ++ +h++ + H dl ++nill e++    v l Dld + r
  MMETSP1325-20131115|1025_1 284 ATQSLHGLLASQRVagNDPVTAIKIFRRVVEQVQVLHSVRLLHFDLKPRNILLLEDG---SVVLCDLDASMR 352
                 57999999999777766666677899******************************9...*******98866 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   1.9e-05     0.026       3      61 .]       9      66 ..       7      66 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.9e-05
   PF13855.1  3 LkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                +++L+L ++  lk +i  +++k+++ L++L+Ls+++  +  + a++++  L  L+L+++++
  MMETSP1325-20131115|1025_1  9 ITHLNLGSCgGLKgDI--ESLKDCP-LQTLYLSYCSKLTGTTLALASCSELVNLDLDDTKI 66
                6788888885555555..59****9.*******7777777778*************99987 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.015        20       1      21 [.       8      29 ..       8      30 .. 0.85
   2 ?    7.0   0.1    0.0049       6.6       2      14 ..      32      46 ..      31      74 .. 0.81
   3 ?   -2.3   0.0       5.7   7.9e+03       5       9 ..     248     252 ..     247     259 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.015
                TESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.slppslsn 21
                ++++L+L ++  l+ ++ + l+ 
  MMETSP1325-20131115|1025_1  8 SITHLNLGSCgGLKgDIES-LKD 29
                579**********999988.765 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0049
                ESEEEETSS.BCB.C CS
  PF00560.28  2 LeeLdLsgN.nlt.s 14
                L++L+Ls++ +lt +
  MMETSP1325-20131115|1025_1 32 LQTLYLSYCsKLTgT 46
                99*******999855 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 5.7
                 EEETS CS
  PF00560.28   5 LdLsg 9  
                 LdLsg
  MMETSP1325-20131115|1025_1 248 LDLSG 252
                 99998 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.5   2.1e+03     147     170 ..       4      27 ..       2      30 .. 0.87
   2 ?   12.0   0.0   6.5e-05     0.088     104     151 ..     303     350 ..     277     356 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.5
                 --TTEEETTSTTHHHHHHHHHHHH CS
  PF01163.17 147 DvsQaveldhpnalefLerDveni 170
                 D++Q++++ +  +   L+ D+e +
  MMETSP1325-20131115|1025_1   4 DLPQSITHLNLGSCGGLKGDIESL 27 
                 9*******9999999999999876 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 6.5e-05
                 -HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESS.SEEE---TTE CS
  PF01163.17 104 eeaeelyeeileemrklykeaglvHaDLSeyNvlvded.kvviIDvsQa 151
                   a ++++ ++e++++l   ++l H DL   N+l+ ed  vv+ D+  +
  MMETSP1325-20131115|1025_1 303 VTAIKIFRRVVEQVQVLH-SVRLLHFDLKPRNILLLEDgSVVLCDLDAS 350
                 456678999999777666.***************999989999998655 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0087        12       2      15 ..       7      22 ..       6      29 .. 0.77
   2 ?    4.8   0.0     0.024        33       4      15 ..      32      44 ..      30      52 .. 0.73
   3 ?    1.8   0.0      0.22   3.1e+02       1      14 [.      53      66 ..      53      68 .. 0.91
   4 ?   -2.8   0.0       6.8   9.3e+03       6      11 ..     247     252 ..     241     252 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0087
   PF13516.1  2 knLtsLdLsnNq..ig 15
                +++t+L+L++++   g
  MMETSP1325-20131115|1025_1  7 QSITHLNLGSCGglKG 22
                689********85334 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.024
   PF13516.1  4 LtsLdLsnNq.ig 15
                L++L Ls++  ++
  MMETSP1325-20131115|1025_1 32 LQTLYLSYCSkLT 44
                9********7354 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.22
   PF13516.1  1 lknLtsLdLsnNqi 14
                ++ L +LdL +++i
  MMETSP1325-20131115|1025_1 53 CSELVNLDLDDTKI 66
                78899******998 PP

  == domain 4    score: -2.8 bits;  conditional E-value: 6.8
   PF13516.1   6 sLdLsn 11 
                 sLdLs+
  MMETSP1325-20131115|1025_1 247 SLDLSG 252
                 899995 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   3.5e-05     0.048     123     193 ..     274     348 ..      68     352 .. 0.63

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.5e-05
                 HHHHHHHHHHHHHHHHHCTHHHHHHHHHH........HHHHHHHHHHC........................SS--EEB-SS-SGGGEEEETTTTEEEE---T CS
  PF01636.18 123 ltllrllesataalvasellelleeleer........vlaalaallpg........................aeppvllHgDlhpgNllvdpddgrvgviDfe 193
                  +++                   + ++++        +         +                          + +llH Dl+p+N+l+ +d+ +v + D++
  MMETSP1325-20131115|1025_1 274 EYPY------------------VLVMDQAtqslhgllA---------SqrvagndpvtaikifrrvveqvqvLHSVRLLHFDLKPRNILLLEDGSVV-LCDLD 348
                 3333..................3333332222222220.........11111222223333333333334446779***************666665.66665 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.26   3.6e+02      21      34 ..       3      17 ..       1      29 [. 0.56
   2 ?    4.9   0.1     0.013        18       3      34 ..       9      40 ..       7      44 .. 0.70
   3 ?    9.4   0.1   0.00051       0.7       3      36 ..      32      66 ..      32      68 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.26
   PF12799.2 21 anLp.nLktLnLsnN 34
                + Lp + ++LnL ++
  MMETSP1325-20131115|1025_1  3 KDLPqSITHLNLGSC 17
                445435677777766 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.013
   PF12799.2  3 LevLdLsnNn.Ik.dlppelanLpnLktLnLsnN 34
                 ++L+L ++  +k d++  l+ +p L+tL+Ls++
  MMETSP1325-20131115|1025_1  9 ITHLNLGSCGgLKgDIES-LKDCP-LQTLYLSYC 40
                567777777436666666.66666.999999987 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.00051
   PF12799.2  3 LevLdLsnNn.IkdlppelanLpnLktLnLsnNpi 36
                L++L+Ls+++ ++     la+++ L +L+L+ ++i
  MMETSP1325-20131115|1025_1 32 LQTLYLSYCSkLTGTTLALASCSELVNLDLDDTKI 66
                9*******8549987777*************9998 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.62   8.4e+02       4      14 ..      10      21 ..       7      28 .. 0.78
   2 ?    5.8   0.5     0.014        19       3      14 ..      32      44 ..      30      67 .. 0.90
   3 ?   -3.0   0.0        10   1.4e+04       5      12 ..     187     194 ..     187     198 .. 0.81
   4 ?   -3.4   0.0        10   1.4e+04       6      10 ..     248     252 ..     247     257 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.62
   PF13504.1  4 keLdLsgnr.Lt 14
                + L+L +++ L+
  MMETSP1325-20131115|1025_1 10 THLNLGSCGgLK 21
                89******8664 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.014
   PF13504.1  3 LkeLdLsgnr.Lt 14
                L++L+Ls+++ Lt
  MMETSP1325-20131115|1025_1 32 LQTLYLSYCSkLT 44
                899******9897 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 10
   PF13504.1   5 eLdLsgnr 12 
                 +L L++nr
  MMETSP1325-20131115|1025_1 187 VLKLMRNR 194
                 58999997 PP

  == domain 4    score: -3.4 bits;  conditional E-value: 10
   PF13504.1   6 LdLsg 10 
                 LdLsg
  MMETSP1325-20131115|1025_1 248 LDLSG 252
                 99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.71u 0.33s 00:00:01.04 Elapsed: 00:00:00.71
# Mc/sec: 1302.81
//
Query:       MMETSP1325-20131115|1037_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.61
# Mc/sec: 337.85
//
Query:       MMETSP1325-20131115|1038_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-12   46.3   0.0    2.7e-12   46.2   0.0    1.0  1  PF00071.17 Ras family
    8.1e-07   29.4   0.0    8.4e-07   29.3   0.0    1.0  1  PF08477.8  Miro-like protein
  ------ inclusion threshold ------
      0.016   14.9   0.1      0.035   13.9   0.0    1.4  2  PF01476.15 LysM domain
      0.076   12.1   0.0      0.078   12.0   0.0    1.0  1  PF00025.16 ADP-ribosylation factor family


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.0   7.9e-16   2.7e-12      58     120 ..       2      65 ..       1      66 [] 0.96

  Alignments for each domain:
  == domain 1    score: 46.2 bits;  conditional E-value: 7.9e-16
                 -GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST.TTSSEEEE---TTGGGG- CS
  PF00071.17  58 qeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae.envpivLvGnKvDleekr 120
                 qe +k+lr++ +++++g++lvy++ + e++e++  + +ei +  +  +vp++LvGnK Dle++r
  MMETSP1325-20131115|1038_1   2 QEAYKALREKWLHEGHGFVLVYSMVKDETLEDLVALRDEILEANPnPDVPMILVGNKLDLEDDR 65 
                 9*****************************************999778*************987 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   2.5e-10   8.4e-07      65     119 .]       7      60 ..       1      60 [. 0.86

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 2.5e-10
   PF08477.8  65 kehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 +  e+ l++  +++lvy++ ++e+le++ +l +++ e++  +  +p+ilvgnklD
  MMETSP1325-20131115|1038_1   7 ALREKWLHEGHGFVLVYSMVKDETLEDLVALRDEILEANP-NPDVPMILVGNKLD 60 
                 43444589999****************************8.899*********99 PP

>> PF01476.15  LysM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         1   3.5e+03       5      12 ..      27      34 ..      23      36 .. 0.76
   2 ?   13.9   0.0     1e-05     0.035      21      41 ..      39      59 ..      37      61 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1
                ----HHHH CS
  PF01476.15  5 kGDTLwkI 12
                k +TL ++
  MMETSP1325-20131115|1038_1 27 KDETLEDL 34
                78899875 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 1e-05
                IIIIITS-TT---.-----EE CS
  PF01476.15 21 qeltelNeeldsprlavGqkL 41
                +e++e+N++ d p + vG+kL
  MMETSP1325-20131115|1038_1 39 DEILEANPNPDVPMILVGNKL 59
                69******************9 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.3e-05     0.078      76     130 ..      10      64 ..       2      66 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.3e-05
                 GGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT- CS
  PF00025.16  76 knYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpea 130
                 ++++++ ++ + v   ++ e le+  +  +++le + + +v++++++NK Dl+++
  MMETSP1325-20131115|1038_1  10 EKWLHEGHGFVLVYSMVKDETLEDLVALRDEILEANPNPDVPMILVGNKLDLEDD 64 
                 4556677788888888888888888888899********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.61
# Mc/sec: 259.28
//
Query:       MMETSP1325-20131115|1036_1  [L=626]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       790  (0.0577823); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.96u 0.39s 00:00:01.35 Elapsed: 00:00:00.97
# Mc/sec: 1546.51
//
Query:       MMETSP1325-20131115|1039_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-16   59.0   0.0    5.3e-16   58.4   0.0    1.3  1  PF10409.4 C2 domain of PTEN tumour-suppressor protein


Domain annotation for each model (and alignments):
>> PF10409.4  C2 domain of PTEN tumour-suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0   3.9e-20   5.3e-16       8     133 ..      89     220 ..      82     221 .. 0.84

  Alignments for each domain:
  == domain 1    score: 58.4 bits;  conditional E-value: 3.9e-20
                 EEEEEEES----TT-----EEEEEE----EEEE----GGGS---....-TT---EEEE.....EEEEE---EEEEEEEEEEE--S--EEEEEEE------TT--EEEEEGGG-BS---G...GGS-TT-EEEEEEE CS
   PF10409.4   8 lksvileriPnfktrggckpkvevyngkkklfkeekstkknked....rakefivked.....kpvpveGDvrveffhkgskklskekifrvwFNTsFiekeenvltlpkneLDkalkdk.dkkfsnnfkvevvfe 133
                 +k++++++ P+++  gg++p ++v  g++  +  +k++  + ++     a +f+++ +      ++ v +  r++++h  +   +++k+  +wF+Ts +e     l l k+eLDk++kdk ++kf+++++v v ++
  MMETSP1325-20131115|1039_1  89 IKGLTIVTTPHMSRLGGYSPTFTVACGTTLYK--SKDFMTPARRvrrrAATKFVMPRSghdgtIGLAVVDETRIDLYHTTTVRGKRKKMTSFWFHTSYVE--GDELRLGKSELDKICKDKrHRKFDQDIQVVVELR 220
                 8999********9999***************5..44444444444454777777766422222468999***********999*****************..*****************************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1300.88
//
Query:       MMETSP1325-20131115|1042_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   12.3   0.0       0.22   10.9   0.0    1.8  1  PF13936.1 Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> PF13936.1  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.6e-05      0.22       5      17 ..      88     103 ..      86     116 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.6e-05
   PF13936.1   5 LtleERleIedl...l 17 
                 Lt+++R++Ie++   +
  MMETSP1325-20131115|1042_1  88 LTPADREWIERWqrcR 103
                 9**********96551 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.57
# Mc/sec: 545.38
//
Query:       MMETSP1325-20131115|1041_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-30  105.0   0.0    3.8e-30  104.7   0.0    1.1  1  PF00378.15 Enoyl-CoA hydratase/isomerase family


Domain annotation for each model (and alignments):
>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.7   0.0   2.7e-34   3.8e-30       4     221 ..      53     297 ..      50     311 .. 0.87

  Alignments for each domain:
  == domain 1    score: 104.7 bits;  conditional E-value: 2.7e-34
                 -----EEEEE-----S----HHHHHHHHHHHHHHHH-TT----EEE----SSB----HHHCHHH..-CHHHH---HHHHHHHHHHHT-SS--EEEE---B-----HHHHHSSEEEEETT-EE--CCCC-----------HHHHH---HHHHHHHH.----EEHHHHHHTTSSSEEE-GCC---HHHHHHHHHH--.......................S--SS-HHHHHHH...HHHH------- CS
  PF00378.15   4 lengvavikldrpekvNalsaelleelkealekleadksikaivlsggekaFsaGaDikelaae..teaeqaqlseeaqklvekledlekpvvAavnGaalGGGlelalacdyriaadeakfglpevklGilpgaggtqrlprlvGvsaAlemil.tgrriradeAlkvGlvdkvvpeeelveeaielakrladk.......................pklalallkkamraa.lekalsevrkq 221
                 + ngv  i+++rp+k+N  ++ ++  + eal+k+ead+ +k+ vl+g  k+++aG D+ + +    +++ ++ ++++ q+l++++ d +kp + a nG a+G+ +      d +ia+d a f++p+ +lG+ p  + +++  r++ +++A++m+   g   +a+eA+  G v +vvp ee ++   + a++++++                       +k++++l+ +++ ++ l+++++ + ++
  MMETSP1325-20131115|1041_1  53 TLNGVTTITMNRPDKLNGWTKGMMLAVFEALQKAEADDATKVAVLTGTGKYYCAGVDLGGTVGLamPKSVYEMIRKSNQQLFDAFLDFKKPMIVAPNGPAIGASVTSGTLVDAIIASDRATFSTPFSRLGVPPEGCSSVFFDRIMDAESAQRMLGpEGWVPTAAEAKVAGFVHEVVPHEEHLAFVQKTAEEWIASgrsrtvcrfprdealldelratnAKESVELATAFLGEKfLNTQYEFAMEK 297
                 6699*********************************************************999989999***********************************************************************************963788899****************9977777777777777788888888888888777777777666666666655555455555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.63
# Mc/sec: 1217.20
//
Query:       MMETSP1325-20131115|1044_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.5   0.1       0.11   12.0   0.0    1.3  1  PF03500.8 Cellulose synthase subunit D


Domain annotation for each model (and alignments):
>> PF03500.8  Cellulose synthase subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.9e-06      0.11     111     139 ..       5      33 ..       1      38 [. 0.80

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.9e-06
   PF03500.8 111 agafgdyvvtrdvdaedlnavprqtiily 139
                    fgd v +rd++a+dl a     i + 
  MMETSP1325-20131115|1044_1   5 GADFGDNVAARDIEADDLAARDEAQIAVA 33 
                 567***************99887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 343.99
//
Query:       MMETSP1325-20131115|1043_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-05   22.1   5.6       0.54    9.8   0.0    3.5  3  PF12799.2  Leucine Rich repeats (2 copies)
    0.00019   21.0   1.0       0.23   11.1   0.3    2.8  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.015   15.1   0.7        6.1    6.7   0.0    3.4  3  PF05725.7  FNIP Repeat
      0.018   14.8   5.6        4.9    7.4   0.1    4.2  3  PF00560.28 Leucine Rich Repeat
       0.13   12.4   5.2        3.6    8.0   0.0    3.9  4  PF13504.1  Leucine rich repeat
        1.2    9.2  10.4         24    5.2   0.1    4.4  5  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00024      0.54      18      35 ..      65      81 ..      43      92 .. 0.71
   2 !    9.4   2.9    0.0003      0.69       2      33 ..      71     124 ..      70     139 .. 0.61
   3 !    6.1   0.2    0.0033       7.5       3      23 ..     117     146 ..     117     149 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00024
   PF12799.2 18 pelanLpnLktLnLsnNp 35
                  +a+L++Lk+Ln+s + 
  MMETSP1325-20131115|1043_1 65 D-FASLTSLKELNMSCCY 81
                3.89*********99765 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.0003
   PF12799.2   2 nLevLdLsnN.....nIkdlppelan...............Lpn..LktLnLsn 33 
                 +L++L+ s +     n+kdlp ++ n               L+n  L++LnLs+
  MMETSP1325-20131115|1043_1  71 SLKELNMSCCydakgNLKDLPKSITNlnlrqcykiegdiesLKNcpLQVLNLSG 124
                 677777777777766666666554443333333333333336666699999986 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.0033
   PF12799.2   3 LevLdLsnN.........nIkdlppelanL 23 
                 L+vL+Ls+          nIkdlp ++  L
  MMETSP1325-20131115|1043_1 117 LQVLNLSGEigmptkftgNIKDLPQSITDL 146
                 8999999988899999999*****998776 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0011       2.5      45      59 ..      66      80 ..      43      82 .. 0.78
   2 !   11.1   0.3    0.0001      0.23       2      36 ..      93     125 ..      92     149 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0011
   PF13855.1 45 fkgLpsLreLnLsgN 59
                f++L+sL+eLn+s +
  MMETSP1325-20131115|1043_1 66 FASLTSLKELNMSCC 80
                777777777777754 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.0001
   PF13855.1   2 nLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnn 36 
                 ++++L+L+++ +++ +i  +++k+++ L+vL+Ls  +
  MMETSP1325-20131115|1043_1  93 SITNLNLRQCyKIEgDI--ESLKNCP-LQVLNLS-GE 125
                 6789******5555444..6*****9.*******.54 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.16   3.7e+02      35      44 .]      71      80 ..      70      80 .. 0.87
   2 ?    6.7   0.0    0.0027       6.1       9      24 ..      89     104 ..      83     113 .. 0.74
   3 ?    3.6   0.0     0.026        59       7      19 ..     136     148 ..     133     150 .] 0.74

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.16
   PF05725.7 35 SlkeLyFgyf 44
                SlkeL+++++
  MMETSP1325-20131115|1043_1 71 SLKELNMSCC 80
                9*****9985 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0027
   PF05725.7   9 eLPsnleiLilgrdFn 24 
                  LP+++++L+l + ++
  MMETSP1325-20131115|1043_1  89 DLPKSITNLNLRQCYK 104
                 699******9954444 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.026
   PF05725.7   7 igeLPsnleiLil 19 
                 i  LP++++ L+l
  MMETSP1325-20131115|1043_1 136 IKDLPQSITDLNL 148
                 5578888888877 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0      0.02        45       1      10 [.      71      80 ..      71      82 .. 0.91
   2 ?    7.4   0.1    0.0021       4.9       2      22 .]      94     115 ..      93     115 .. 0.91
   3 ?    3.3   0.1     0.049   1.1e+02       2       9 ..     117     124 ..     116     148 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.02
                TESEEEETSS CS
  PF00560.28  1 nLeeLdLsgN 10
                +L+eL++s++
  MMETSP1325-20131115|1043_1 71 SLKELNMSCC 80
                79*******9 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0021
                 ESEEEETSS.BCB.CHHHHHHHH CS
  PF00560.28   2 LeeLdLsgN.nlt.slppslsnL 22 
                 ++ L+L+ + +++ ++ + l+n+
  MMETSP1325-20131115|1043_1  94 ITNLNLRQCyKIEgDIES-LKNC 115
                 789**************9.9987 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.049
                 ESEEEETS CS
  PF00560.28   2 LeeLdLsg 9  
                 L++L+Lsg
  MMETSP1325-20131115|1043_1 117 LQVLNLSG 124
                 899***98 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0016       3.6       1      17 []      70      91 ..      70      91 .. 0.77
   2 ?    2.6   0.4       0.1   2.4e+02       4      13 ..      95     105 ..      92     121 .. 0.73
   3 ?    1.6   0.0      0.21   4.9e+02       3      10 ..     117     124 ..     115     140 .. 0.76
   4 ?   -3.0   0.0         6   1.4e+04       4       8 ..     144     148 ..     141     149 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0016
   PF13504.1  1 pnLkeLdLsgn.....rLtsLP 17
                ++LkeL+ s++     +L++LP
  MMETSP1325-20131115|1043_1 70 TSLKELNMSCCydakgNLKDLP 91
                69*********55544488887 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.1
   PF13504.1   4 keLdLsgnr.L 13 
                 ++L+L+ ++ +
  MMETSP1325-20131115|1043_1  95 TNLNLRQCYkI 105
                 89999888644 PP

  == domain 3    score: 1.6 bits;  conditional E-value: 0.21
   PF13504.1   3 LkeLdLsg 10 
                 L++L+Lsg
  MMETSP1325-20131115|1043_1 117 LQVLNLSG 124
                 899**997 PP

  == domain 4    score: -3.0 bits;  conditional E-value: 6
   PF13504.1   4 keLdL 8  
                 ++L+L
  MMETSP1325-20131115|1043_1 144 TDLNL 148
                 56666 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0         6   1.4e+04       7      18 ..      44      55 ..      44      58 .. 0.65
   2 ?    5.2   0.2     0.011        25       1      12 [.      69      80 ..      69      90 .. 0.88
   3 ?    5.2   0.1     0.011        24       2      16 ..      92     107 ..      91     114 .. 0.78
   4 ?    2.6   0.1     0.073   1.7e+02       2      11 ..     115     124 ..     112     135 .. 0.86
   5 ?   -0.3   0.0      0.65   1.5e+03       2       9 ..     141     148 ..     140     150 .] 0.84

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 6
   PF13516.1  7 LdLsnNqigdeG 18
                L++ +  i+d+ 
  MMETSP1325-20131115|1043_1 44 LNFHDDMITDII 55
                566666688865 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.011
   PF13516.1  1 lknLtsLdLsnN 12
                l++L++L++s +
  MMETSP1325-20131115|1043_1 69 LTSLKELNMSCC 80
                689*******99 PP

  == domain 3    score: 5.2 bits;  conditional E-value: 0.011
   PF13516.1   2 knLtsLdLsnNq.igd 16 
                 k++t+L+L ++  i +
  MMETSP1325-20131115|1043_1  92 KSITNLNLRQCYkIEG 107
                 689*******964644 PP

  == domain 4    score: 2.6 bits;  conditional E-value: 0.073
   PF13516.1   2 knLtsLdLsn 11 
                 + L++L+Ls+
  MMETSP1325-20131115|1043_1 115 CPLQVLNLSG 124
                 569*****95 PP

  == domain 5    score: -0.3 bits;  conditional E-value: 0.65
   PF13516.1   2 knLtsLdL 9  
                 +++t+L+L
  MMETSP1325-20131115|1043_1 141 QSITDLNL 148
                 6899**99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.59
# Mc/sec: 609.24
//
Query:       MMETSP1325-20131115|1045_1  [L=374]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-10   39.3   0.1    3.8e-07   29.5   0.1    2.7  2  PF00644.15 Poly(ADP-ribose) polymerase catalytic domain


Domain annotation for each model (and alignments):
>> PF00644.15  Poly(ADP-ribose) polymerase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0   0.00028       3.8       4      68 ..     129     203 ..     127     209 .. 0.79
   2 !   29.5   0.1   2.8e-11   3.8e-07      89     204 ..     249     372 ..     219     373 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00028
                 EEEE--TTSHHHHHHHHHHHHTS-TTTTEEEEEEEEEEEE---CCCCGCCGG........SS-.....EEEEEE---G CS
  PF00644.15   4 klepldkkseeykeiekylkktrdsthaklkileifrvqregeaerfqekkk........lrn.....rrlLwHGsrl 68 
                  ++ ++++s +y+++++ + +   +  +k ++++++++++++    +q+ k+        +       ++  +HG+++
  MMETSP1325-20131115|1045_1 129 AISLMSNASVNYSNVKRQFWEGWVHPGSKPTVMRVYEIKNPTP--VYQSYKNyiaelerdG-TdvaasKKRRFHGTSM 203
                 5788999***********9998886666**********99976..6777776777986651.0456669999****97 PP

  == domain 2    score: 29.5 bits;  conditional E-value: 2.8e-11
                 ---------EEBSSHHHHHGGG---SSS----................EEEEEEE---EEE-SS--T.-SS------EEE----EEEGG.EE---...E----EEE----S-S-SB--EEESSGGGEEEEEEEEEE CS
  PF00644.15  89 tGymfGkGiYfAddaskSanYcktseangegl................llLaeValGdikeltkady.lekakkgkksvkgkgktepesivekdg...vPlgkssatkyesseleyneyvvydkeqvrlkYLlevk 204
                  G ++G+G Y+++ +skS  Y ++se +g++                 ++++ V lG   + t+++   ++ k+  k                dg     ++    t  +++ l+y+e vvyd+  + ++YL+ ++
  MMETSP1325-20131115|1045_1 249 GGLRYGSGHYYSKASSKSNDYAYASERQGKATggsapdgtsavaqfrcVFMCTVILGTSLNATQSHLsEDQLKPVLKPRL------------LDGaygLHDSVTGLTTDDGGALNYEENVVYDDCCAIPSYLIVYR 372
                 4788********************999887767777777788888899**********4444444432222222222222............333322333334456667777********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 1572.35
//
Query:       MMETSP1325-20131115|1047_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0021   17.7   0.4      0.021   14.4   0.1    2.3  2  PF00989.19 PAS fold
  ------ inclusion threshold ------
       0.12   11.9   0.2       0.23   11.0   0.1    1.5  1  PF06468.8  Spondin_N
        5.2    7.3  10.5       0.65   10.3   0.7    2.8  3  PF13335.1  Magnesium chelatase, subunit ChlI
        7.6    6.2   7.7       0.45   10.2   0.9    2.1  3  PF03885.8  Protein of unknown function (DUF327)


Domain annotation for each model (and alignments):
>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.11   3.7e+02      25      46 ..      27      48 ..      10      55 .. 0.88
   2 !   14.4   0.1   6.3e-06     0.021      31      99 ..     112     184 ..     109     188 .. 0.88

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.11
                EETHHHHHHH-S-HHHHS---C CS
  PF00989.19 25 yvNaaaeellGlsreevlgksl 46
                ++N++++++   +ree+++k l
  MMETSP1325-20131115|1047_1 27 EANRTFTDQVREEREEAMHKRL 48
                6899999999999999999865 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 6.3e-06
                 HHHH-S-HHHHS---CCHHCSCCHCCTCCHHHHHHHHHH--ECEEEEECCS.....SSSSEEEEEEEEEECS- CS
  PF00989.19  31 eellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfkl....rdgrpihlevraspvrda 99 
                 +e+   sree++    ++ +++++++  +++l++++  +ee+  + +++++    r++rp + + +++ ++da
  MMETSP1325-20131115|1047_1 112 AEQIPRSREEAMALATNIMLSHTKNYSEYKQLRENMDGMEEFLEMLRTIEVedgsRNQRPAQTRREQNVLYDA 184
                 56666799*******************************************9999999998888888888877 PP

>> PF06468.8  Spondin_N
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   6.7e-05      0.23      30      78 ..     125     173 ..     112     225 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.7e-05
   PF06468.8  30 fskvlgatHsadyalweegelasegvkelaEtgstdkLeseleeqqeki 78 
                 +++ ++ +H+++y+ +++     +g++e+ E+ +t ++e   ++q+ ++
  MMETSP1325-20131115|1047_1 125 LATNIMLSHTKNYSEYKQLRENMDGMEEFLEMLRTIEVEDGSRNQRPAQ 173
                 5667999******************************999988876554 PP

>> PF13335.1  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.7   0.00019      0.65       4      33 ..       7      37 ..       4      64 .. 0.73
   2 ?   -0.6   0.0      0.45   1.5e+03      14      52 ..     111     151 ..     106     160 .. 0.60
   3 ?    2.4   0.4     0.055   1.9e+02      14      66 ..     168     220 ..     156     225 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00019
   PF13335.1  4 ssaevrerVaaarerqaeRlaa.iklnaels 33
                 s+e ++rV+a r+rq+eR++a  ++  +++
  MMETSP1325-20131115|1047_1  7 RSQETKKRVEAERQRQQERYEAnRTFTDQVR 37
                6999****************96323333333 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.45
   PF13335.1  14 aarerqaeRlaa..iklnaelsgeelrklceldseaeklle 52 
                 aa+++ ++R++a    +n  ls+++  +  +  +e+++ +e
  MMETSP1325-20131115|1047_1 111 AAEQIPRSREEAmaLATNIMLSHTKNYSEYKQLRENMDGME 151
                 67788888888753367777776554444444444444444 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.055
   PF13335.1  14 aarerqaeRlaaiklnaelsgeelrklceldseaeklleqalerlglSaRglh 66 
                 + r +q +R++++  +a   + e+ ++ + d+e++kl eq  e +g  a + +
  MMETSP1325-20131115|1047_1 168 NQRPAQTRREQNVLYDAASAKPEMPAMQPEDQEKQKLEEQLXEATGAAAAART 220
                 55778999999999999999******999999999999999998887665544 PP

>> PF03885.8  Protein of unknown function (DUF327)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.9   0.00013      0.45       8      56 ..      11      59 ..       3      70 .. 0.70
   2 ?   -1.2   0.1      0.43   1.5e+03      40      54 ..     138     152 ..     112     177 .. 0.59
   3 ?   -2.0   0.1      0.77   2.6e+03      34      45 ..     197     208 ..     158     214 .. 0.50

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00013
                --......-------------HHHHHHHHHHHHHHHHHHHHHHHHHH-- CS
   PF03885.8  8 kklkkktkkkskkkeskesksFsevleeeekekseeeLkelldeieeag 56
                 k + + ++++++++ +++ +F++++ ee++e  +++L +++  +ee+ 
  MMETSP1325-20131115|1047_1 11 TKKRVEAERQRQQERYEANRTFTDQVREEREEAMHKRLGAMVGMLEEES 59
                22222333334444444559*********************99998875 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.43
                 HHHHHHHHHHHHHHH CS
   PF03885.8  40 kseeeLkelldeiee 54 
                 +++++L+e +d  ee
  MMETSP1325-20131115|1047_1 138 SEYKQLRENMDGMEE 152
                 222333333333332 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 0.77
                 HHHHHHHHHHHH CS
   PF03885.8  34 eeeekekseeeL 45 
                 e++ek+k ee+L
  MMETSP1325-20131115|1047_1 197 EDQEKQKLEEQL 208
                 233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1268  (0.0927443); expected 273.4 (0.02)
Passed bias filter:                      629  (0.0460064); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.45s 00:00:01.07 Elapsed: 00:00:00.76
# Mc/sec: 807.19
//
Query:       MMETSP1325-20131115|1050_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.089   12.3   4.0       0.13   11.8   2.8    1.3  1  PF04360.7 Serglycin
       0.15   11.6  12.8       0.27   10.7   8.9    1.5  1  PF13436.1 Glycine-zipper containing OmpA-like membrane domain


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.8     2e-05      0.13      92     110 ..     157     175 ..     102     179 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2e-05
   PF04360.7  92 sgsgsgsGsGsGsgsGsGf 110
                 +g+g+g+G+G+GsgsGsG+
  MMETSP1325-20131115|1050_1 157 AGAGAGAGAGAGSGSGSGS 175
                 4667777777777777765 PP

>> PF13436.1  Glycine-zipper containing OmpA-like membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   8.9     4e-05      0.27      54     115 ..     134     191 ..      97     193 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 4e-05
   PF13436.1  54 egaavGaavGAaagaaaggagagaaiGAaaGllvGaaaGagagqassykaqrrydnayrqCm 115
                  g + G    Aa++aaa + g+g+  GA+aG+ +Ga +G+g+g+   +++    ++ +++Cm
  MMETSP1325-20131115|1050_1 134 SGFVEGMFR-AAGSAAALH-GTGTDAGAGAGAGAGAGSGSGSGSD--ERKAPAVSSGMAECM 191
                 333333333.333333333.5566666666655555555555555..334455777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.51s 00:00:00.91 Elapsed: 00:00:00.72
# Mc/sec: 835.40
//
Query:       MMETSP1325-20131115|1049_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.43s 00:00:00.90 Elapsed: 00:00:00.73
# Mc/sec: 843.65
//
Query:       MMETSP1325-20131115|1052_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 492.11
//
Query:       MMETSP1325-20131115|1053_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.70
# Mc/sec: 243.06
//
Query:       MMETSP1325-20131115|1054_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.49   10.3   9.3       0.54   10.2   6.4    1.1  1  PF07242.6  Protein of unknown function (DUF1430)
       0.77    9.2  15.7       0.94    9.0  10.9    1.2  1  PF04610.9  TrbL/VirB6 plasmid conjugal transfer protein
        5.4    5.5  12.8        6.4    5.3   8.8    1.1  1  PF06398.6  Integral peroxisomal membrane peroxin


Domain annotation for each model (and alignments):
>> PF07242.6  Protein of unknown function (DUF1430)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   6.4   0.00012      0.54      33      83 ..       5      55 ..       1      59 [. 0.61

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00012
   PF07242.6 33 Gyslfkrhkeyliiqlivlviililifiltkekiillvvlvlllielllil 83
                G s  +  ++++++ ++v+v+++++++++    ++++vv+v++++ +++ +
  MMETSP1325-20131115|1054_1  5 GGSWSQDARWFMVVLVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAV 55
                556666667777777777777777777766666666666666655555543 PP

>> PF04610.9  TrbL/VirB6 plasmid conjugal transfer protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  10.9   0.00021      0.94      96     143 ..       8      54 ..       2      60 .] 0.30

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00021
   PF04610.9  96 lssgigaallgllallgvllllflaavvllvakialalllalGpifia 143
                 +s+  + +++ +l++++v++++++++vv++v+ +++ +++++ ++++a
  MMETSP1325-20131115|1054_1   8 WSQ-DARWFMVVLVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVA 54 
                 333.22222222222222222222222222222222222222222222 PP

>> PF06398.6  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   8.8    0.0014       6.4      37      79 ..       7      49 ..       6      58 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0014
   PF06398.6 37 tWtnpdktlsfllvytficlvpylelvvlplllllfvimvpgy 79
                +W+++  +  ++lv++++++v+ +++vv++++++++v++v+ +
  MMETSP1325-20131115|1054_1  7 SWSQDARWFMVVLVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV 49
                6********9999999999999998886666666666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1536  (0.112346); expected 273.4 (0.02)
Passed bias filter:                      639  (0.0467379); expected 273.4 (0.02)
Passed Vit filter:                       245  (0.0179198); expected 13.7 (0.001)
Passed Fwd filter:                       144  (0.0105325); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.05u 0.44s 00:00:01.49 Elapsed: 00:00:01.06
# Mc/sec: 135.64
//
Query:       MMETSP1325-20131115|1055_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|1056_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.22   11.6   5.8       0.27   11.3   4.0    1.2  1  PF05130.7 FlgN protein
       0.34    9.3   5.8       0.36    9.3   4.0    1.0  1  PF08317.6 Spc7 kinetochore protein
       0.35   10.8   6.0        0.4   10.6   0.1    2.5  2  PF08946.5 Osmosensory transporter coiled coil
       0.37   10.5   7.2       0.55    9.9   0.4    2.5  3  PF10506.4 PDZ domain of MCC-2 bdg protein for Usher syndrome
        2.6    7.9   7.8        2.3    8.1   1.5    2.1  2  PF04568.7 Mitochondrial ATPase inhibitor, IATP


Domain annotation for each model (and alignments):
>> PF05130.7  FlgN protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.0    0.0001      0.27      44     103 ..      17      83 ..       6      86 .] 0.80

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.0001
   PF05130.7  44 eeKeellaeleeleeerqklleelgle...aeeatlsella....edeelaelwqelkelleelqel 103
                 e+ +++++++++le+ r++l+++++le     ++  s++++    + + ++el+q+ ++ +++lqe+
  MMETSP1325-20131115|1056_1  17 EHSKKCAEQIADLEKSRSALTASHRLEveaLRQDHASAMARseaeKLAYVQELQQSHDDHVQDLQEQ 83 
                 667899*********************8874444445555565688888888888888889899887 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   4.0   0.00013      0.36     177     253 ..       9      84 ..       2      86 .] 0.77

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00013
   PF08317.6 177 silpklr.ekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekk 253
                  +++klr e +++  e++a+L++ ++ l+   + e+e+lr++ +s +   e   +kl+  +e  q++++++++l+e++
  MMETSP1325-20131115|1056_1   9 TVAEKLRlEHSKKCAEQIADLEKSRSALTASHRLEVEALRQDHASAMARSE--AEKLAYVQELQQSHDDHVQDLQEQI 84 
                 55566652456788999**************************99999877..6667777777777777777777776 PP

>> PF08946.5  Osmosensory transporter coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00015       0.4      26      42 ..      24      40 ..      17      42 .. 0.92
   2 ?    1.6   1.4     0.093   2.5e+02      10      29 ..      69      85 ..      57      86 .] 0.69

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00015
   PF08946.5 26 eqIaeLekKRqkLvdqH 42
                eqIa+Lek R+ L + H
  MMETSP1325-20131115|1056_1 24 EQIADLEKSRSALTASH 40
                8************9999 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.093
   PF08946.5 10 LqehhdnIEqkIedideqIa 29
                Lq+ hd     + d+ eqIa
  MMETSP1325-20131115|1056_1 69 LQQSHD---DHVQDLQEQIA 85
                555555...36788888887 PP

>> PF10506.4  PDZ domain of MCC-2 bdg protein for Usher syndrome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.4    0.0002      0.55      38      57 ..       5      24 ..       2      30 .. 0.89
   2 ?    1.5   0.1     0.085   2.3e+02      27      47 ..      21      42 ..      20      53 .. 0.77
   3 ?    3.7   0.9     0.018        49      35      62 ..      55      84 ..      29      85 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0002
   PF10506.4 38 resnavAlrLalqyservke 57
                ++ + vA +L+l +s ++ e
  MMETSP1325-20131115|1056_1  5 ANTETVAEKLRLEHSKKCAE 24
                7899**************87 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.085
   PF10506.4 27 rseelsmdlgkresnavAl.rL 47
                +++e  +dl k  s ++A  rL
  MMETSP1325-20131115|1056_1 21 KCAEQIADLEKSRSALTAShRL 42
                6778888888888888887555 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.018
   PF10506.4 35 lgkresnavAl..rLalqyservkelysql 62
                +++ e++  A    L+  + ++v+ l++q+
  MMETSP1325-20131115|1056_1 55 MARSEAEKLAYvqELQQSHDDHVQDLQEQI 84
                578899999988899999********9985 PP

>> PF04568.7  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.2     0.032        88      68      96 ..      20      48 ..      17      51 .. 0.86
   2 ?    8.1   1.5   0.00084       2.3      67      99 ..      56      84 ..      52      85 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.032
   PF04568.7 68 kkekeqLakLkekleeeikhhkkeieele 96
                kk +eq+a L ++ +  ++ h+ e+e l 
  MMETSP1325-20131115|1056_1 20 KKCAEQIADLEKSRSALTASHRLEVEALR 48
                67789*****9999999999999999875 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00084
   PF04568.7 67 rkkekeqLakLkekleeeikhhkkeieeleeei 99
                 + e+e+La ++e +++    h +++++l+e+i
  MMETSP1325-20131115|1056_1 56 ARSEAEKLAYVQELQQS----HDDHVQDLQEQI 84
                57899********9999....**********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       959  (0.0701434); expected 273.4 (0.02)
Passed bias filter:                      526  (0.0384728); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.55
# Mc/sec: 374.70
//
Query:       MMETSP1325-20131115|1051_1  [L=725]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-41  141.3   0.0    4.1e-41  140.7   0.0    1.2  1  PF00069.20 Protein kinase domain
    9.3e-20   70.7   0.0    1.4e-19   70.1   0.0    1.3  1  PF07714.12 Protein tyrosine kinase
    0.00033   19.6   0.0    0.00068   18.6   0.0    1.5  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.7   0.0   9.1e-45   4.1e-41       2     252 ..     165     452 ..     164     457 .. 0.82

  Alignments for each domain:
  == domain 1    score: 140.7 bits;  conditional E-value: 9.1e-45
                 EEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH....-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH....HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E.........EE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST......HHHHHHHHHCCCHHTTS--GGGGCSHHH..................HHHHHHHHHHT-SSGGGS--HH CS
  PF00069.20   2 elleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.Elkilkkls....Hpnivkllevfeekdelylvleyveggdlfdllk....kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel.........kiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge......seedqleliekilkkkleedepksssks..................eelkdlikkllekdpakRltae 252
                  l +++G+G+fG+V+ ++  + ++  AvK+++k++  ++ + +++   l+il++ +    Hpni+ l +v+++ +++y+v+  ++g dl++++      eg l+e  + ++++ +l++l++lH+ g +HrD+K+eNiL+d++  +         k++DF ++++l   +    ++  g+  +mAPEvl ++  +  k DvWs++++l e+  g+  f+          +++++ ++ il+++ +  e+     +                    +++l++  l+ +p++R ++ 
  MMETSP1325-20131115|1051_1 165 ALSQEIGRGRFGQVFACTMADGRR-LAVKRMSKHKHMNTRKMARLCdCLSILHEPErgrrHPNILYLERVMQSPTHFYMVMARMPG-DLYEFIGhectVEGGLDEPIALDVIRPVLSALHHLHRLGYAHRDIKSENILVDSRRAVgsvvevvdvKLIDFDMSCQLaAPPPPFGSSTQGSLGFMAPEVLFREIPDHGKLDVWSAACVLLEMSMGRKWFNAVwvqaysAYAKREKEVRGILGGRERAYEDL----RqslshnaavamdvissptGIVRELLELALDINPTTRASMS 452
                 67899*************999985.********999998887766565677766534666************************99.******9777778888*************************************99999*******************9666666789999*************************************99988777555433333344444444433333333....22334667777777777667778888888888888888765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   0.0   3.1e-23   1.4e-19       3     225 ..     166     398 ..     164     421 .. 0.81

  Alignments for each domain:
  == domain 1    score: 70.1 bits;  conditional E-value: 3.1e-23
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECT..TSBHHHHHHHHHHHHHHHHT....-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHT..GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET.........TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE.EEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS- CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke..saeeeekeefleeakimkkl....khpnivkllgvctkeepllivteyvkgGdLlefLrkk..ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee.........ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEiftlgespypglsneevlellkegkrle 225
                 l++++G+G+fG+V+ +t+      +  + avK +++  +++ ++ +++++ ++i+++     +hpni+ l  v+ +  ++++v+  ++ GdL+ef+ ++   +  l+    l+++  + +++++L++  + Hrd+ + N+L+++            vk+ Df ++ ++         ++++ ++ +mapE+l+++     k DvWs  ++l E+   g++ ++ +  +   ++ k++k+++
  MMETSP1325-20131115|1051_1 166 LSQEIGRGRFGQVFACTMA-----DGRRLAVKRMSKhkHMNTRKMARLCDCLSILHEPergrRHPNILYLERVMQSPTHFYMVMARMP-GDLYEFIGHEctVEGGLDEPIALDVIRPVLSALHHLHRLGYAHRDIKSENILVDSrravgsvveVVDVKLIDFDMSCQL-AAPPPPFGSSTQGSLGFMAPEVLFREIpDHGKLDVWSAACVLLEMSM-GRKWFNAVWVQAYSAYAKREKEVR 398
                 6799***************.....88999***9954124445557888999999976322358************9999******997.8******99866678899999*********************************9999988875557899999999999.556668899999************999455699***********976.777777766666666666666555 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   1.5e-07   0.00068     120     168 ..     270     324 ..     246     332 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 1.5e-07
   PF06293.9 120 kralleavGrliakmhragvnHtdlnahnilldeee......ekakvwliDldka 168
                    +++ v ++ + +hr g +H+d+   nil+d ++      e  +v liD+d +
  MMETSP1325-20131115|1051_1 270 ALDVIRPVLSALHHLHRLGYAHRDIKSENILVDSRRavgsvvEVVDVKLIDFDMS 324
                 556677788899****************************************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       586  (0.0428613); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.15u 0.35s 00:00:01.50 Elapsed: 00:00:00.82
# Mc/sec: 2118.73
//
Query:       MMETSP1325-20131115|1058_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   14.4   0.3       0.03   14.4   0.2    1.6  2  PF08581.5  Tup N-terminal
      0.041   11.9   1.0      0.041   11.9   0.7    1.0  1  PF11336.3  Protein of unknown function (DUF3138)
      0.086   12.8   3.5      0.089   12.7   2.5    1.1  1  PF14389.1  Leucine-zipper of ternary complex factor MIP1
        1.2    7.9   3.8        1.1    8.0   2.6    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        2.7    7.4   5.6       0.42    9.9   1.4    1.6  2  PF04977.10 Septum formation initiator
        3.5    6.9   6.2        3.7    6.8   4.3    1.3  1  PF05529.7  B-cell receptor-associated protein 31-like


Domain annotation for each model (and alignments):
>> PF08581.5  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.2   1.3e-05      0.03      17      49 ..       8      40 ..       2      48 .. 0.86
   2 ?   -1.5   0.1       1.2   2.6e+03      36      45 ..      55      64 ..      52      66 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.3e-05
   PF08581.5 17 sreassykaqkedyelkiqqqiqEleqirqtvy 49
                 ++as +k++   +e ++++q +E+e++r +v 
  MMETSP1325-20131115|1058_1  8 EKQASLSKEKVAGLEAQLAKQQEEMEALRSKVA 40
                4557788889999******************96 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1.2
   PF08581.5 36 qqiqEleqir 45
                 q +++e ++
  MMETSP1325-20131115|1058_1 55 DQKADMEKMQ 64
                4666676666 PP

>> PF11336.3  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.7   1.8e-05     0.041      20      53 ..      11      44 ..       4      62 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.8e-05
   PF11336.3 20 aaskaeqikalqaqlaalqqqvkelraalaakpa 53
                a+ + e+++ l+aqla+ q+++++lr+++aa p 
  MMETSP1325-20131115|1058_1 11 ASLSKEKVAGLEAQLAKQQEEMEALRSKVAASPE 44
                5567799***********************9886 PP

>> PF14389.1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   2.5   3.9e-05     0.089       3      45 ..       3      46 ..       1      65 [. 0.74

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.9e-05
   PF14389.1  3 kkassekrsaL.eqeVkkLqkqLqdeekvreaLekalgrssssl 45
                k ++ ek+ +L ++ V+ L+ qL ++++  eaL++ +  s+ + 
  MMETSP1325-20131115|1058_1  3 KDKKAEKQASLsKEKVAGLEAQLAKQQEEMEALRSKVAASPETE 46
                455567777772556*******************9998876554 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.6   0.00048       1.1      64     108 ..      10      53 ..       1      67 [] 0.55

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00048
   PF10186.4  64 evaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle 108
                 + + +ke+ + + +++++++ee+e++r+++++ + + ++++  l 
  MMETSP1325-20131115|1058_1  10 QASLSKEKVAGLEAQLAKQQEEMEALRSKVAA-SPETERPKGILD 53 
                 34456666667777777777777777777666.334444444444 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4   0.00019      0.42      23      48 ..      15      40 ..       6      47 .. 0.88
   2 ?   -2.9   0.1       1.9   4.4e+03      29      37 ..      56      64 ..      54      66 .. 0.48

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00019
  PF04977.10 23 kqeiaalqaelaklkaeneeLeaevk 48
                k+++a l+a+lak+++e e+L ++v+
  MMETSP1325-20131115|1058_1 15 KEKVAGLEAQLAKQQEEMEALRSKVA 40
                789999**************999987 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.9
  PF04977.10 29 lqaelaklk 37
                ++a+++k++
  MMETSP1325-20131115|1058_1 56 QKADMEKMQ 64
                455555544 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   4.3    0.0016       3.7     150     184 ..       6      40 ..       1      66 [. 0.80

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0016
   PF05529.7 150 lkeekekklkeeveklkkeleekekdlealkkqae 184
                  +e++ + +ke+v+ l+++l+++++++eal+++++
  MMETSP1325-20131115|1058_1   6 KAEKQASLSKEKVAGLEAQLAKQQEEMEALRSKVA 40 
                 23455566778899999999999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1010  (0.0738736); expected 273.4 (0.02)
Passed bias filter:                      681  (0.0498098); expected 273.4 (0.02)
Passed Vit filter:                       113  (0.00826507); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.57
# Mc/sec: 276.82
//
Query:       MMETSP1325-20131115|1059_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.76
# Mc/sec: 223.87
//
Query:       MMETSP1325-20131115|1060_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0017   17.5   0.6        1.2    8.2   0.0    2.1  2  PF11932.3  Protein of unknown function (DUF3450)
  ------ inclusion threshold ------
      0.012   15.0   0.1      0.019   14.3   0.0    1.3  1  PF01442.13 Apolipoprotein A1/A4/E domain
      0.053   11.6   0.6      0.071   11.2   0.4    1.1  1  PF08580.5  Yeast cortical protein KAR9
      0.059   13.2   0.3       0.13   12.1   0.1    1.6  2  PF10205.4  Predicted coiled-coil domain-containing protein
      0.084   12.5   0.8       0.16   11.6   0.6    1.4  1  PF07889.7  Protein of unknown function (DUF1664)
       0.16   11.8   1.4       0.16   11.8   0.2    1.5  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        0.2   11.6   3.2        8.5    6.4   1.0    2.2  2  PF02970.11 Tubulin binding cofactor A
       0.53   10.1   5.6        1.2    9.0   1.2    2.3  2  PF00170.16 bZIP transcription factor


Domain annotation for each model (and alignments):
>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1   0.00091       1.6      29      70 ..      30      71 ..      23      78 .. 0.68
   2 !    8.2   0.0   0.00068       1.2     121     152 ..     112     143 ..     103     150 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00091
   PF11932.3 29 eaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenlk 70
                + ++k++++ ++  +kidkl++q++e  +  +++++e+e+l+
  MMETSP1325-20131115|1060_1 30 DFKTKIVESLEEYDAKIDKLKAQMDEHTHSAKDIHKEIEQLQ 71
                455666666677777777777777777777777777777765 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00068
   PF11932.3 121 ldlPflkeeRlaRlekLrelmdradvsvaEKf 152
                   lP l e+ +aR+e+L+  ++++d  +a+++
  MMETSP1325-20131115|1060_1 112 HVLPHLDEKKQARVEELQVWLTSTDTPAADRL 143
                 568*************************9986 PP

>> PF01442.13  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.1e-05     0.019      59     143 ..      29     136 ..      27     148 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.1e-05
                 HHHHHT-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---........................---------HHHHHH----------XXXXXXXXXXXXXX CS
  PF01442.13  59 devkqqlgqnleelrqrlkpyaeelreqlnrdveelreqLapvaee........................lrsrlrqnvealkerLaPyaeelrqklaerleelkeslt 143
                 d++k+++ ++lee+ ++++ + ++++e ++ +++++++ +++++e+                        + s+    +++l +++ P+++e +q   e+l+  ++s  
  MMETSP1325-20131115|1060_1  29 DDFKTKIVESLEEYDAKIDKLKAQMDE-HTHSAKDIHKEIEQLQERkftvpssevcalsgrpilsgpfyvFPSNYVYLADELTAHVLPHLDEKKQARVEELQVWLTSTD 136
                 78999****************999999.999999999999999999999999999999999999999999888889999999999999999999888888877666554 PP

>> PF08580.5  Yeast cortical protein KAR9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   4.1e-05     0.071      52     105 ..      18      72 ..      12      81 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.1e-05
   PF08580.5  52 lyeLvegienIekalvkllelveaevkaneddslnediva.slldlieevsqlel 105
                 + ++++++ +I+ + +k+ e +e++ ++++    + d++  s+ d+ +e++ql+ 
  MMETSP1325-20131115|1060_1  18 ILPFFRDFVTIDDFKTKIVESLEEYDAKIDKLKAQMDEHThSAKDIHKEIEQLQE 72 
                 456789*********************************99************86 PP

>> PF10205.4  Predicted coiled-coil domain-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   7.6e-05      0.13      29      69 ..      33      73 ..      27      82 .. 0.91
   2 ?   -2.7   0.0       3.3   5.6e+03      60      70 ..     122     132 ..     116     140 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 7.6e-05
   PF10205.4 29 asLkeeLkqkeaslRkteqevdsLgFRnkqLerrvellqee 69
                +++ e+L +++a++ k+++ +d  +   k +++ +e+lqe 
  MMETSP1325-20131115|1060_1 33 TKIVESLEEYDAKIDKLKAQMDEHTHSAKDIHKEIEQLQER 73
                57789**********************************85 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 3.3
   PF10205.4  60 errvellqeel 70 
                 + rve+lq  l
  MMETSP1325-20131115|1060_1 122 QARVEELQVWL 132
                 45777777655 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.6   9.5e-05      0.16      52      97 ..      28      73 ..      26      83 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.5e-05
   PF07889.7 52 lekvseavasakkhLsqridnlddkldeqkeiskeikeevteired 97
                +++++++++++  +  ++id+l  ++de+++ +k+i++e+ +++e 
  MMETSP1325-20131115|1060_1 28 IDDFKTKIVESLEEYDAKIDKLKAQMDEHTHSAKDIHKEIEQLQER 73
                6777888888888999999999999999999999999999999975 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   9.6e-05      0.16      25      66 ..      33      74 ..      29      85 .. 0.86
   2 ?   -3.7   0.0       6.3   1.1e+04      41      48 ..     121     128 ..     114     130 .. 0.49

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.6e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT.. CS
  PF02403.17 25 kedvdelleldeerrelqveleelqaerNelskeIgkakkkk 66
                ++ v++l e d++  +l+++++e  +  + + keI+++ ++k
  MMETSP1325-20131115|1060_1 33 TKIVESLEEYDAKIDKLKAQMDEHTHSAKDIHKEIEQLQERK 74
                578999999999999999999999999999999999998776 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 6.3
                 HHHHHHHH CS
  PF02403.17  41 lqveleel 48 
                  q+++eel
  MMETSP1325-20131115|1060_1 121 KQARVEEL 128
                 23334443 PP

>> PF02970.11  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.0     0.005       8.5      23      61 ..      39      81 ..      32      82 .. 0.83
   2 ?    4.8   0.0     0.016        27      53      79 ..     110     136 ..     106     148 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.005
                HHHHHHHHHHHHH-...--.-HHHHHHHHHH---TTTHHHHHH CS
  PF02970.11 23 veqqeerveklkae...ge.deydlkkqeeVlketekmlpdlk 61
                +e+  ++++klka+   +    +d++k+ e l+e +  +p+++
  MMETSP1325-20131115|1060_1 39 LEEYDAKIDKLKAQmdeHThSAKDIHKEIEQLQERKFTVPSSE 81
                6778899******9976334778999********999999875 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.016
                 TTTHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02970.11  53 tekmlpdlkkrlqkavadLeslleeee 79 
                 t  +lp+l ++ q+ v++L+ +l + +
  MMETSP1325-20131115|1060_1 110 TAHVLPHLDEKKQARVEELQVWLTSTD 136
                 6789*****************987765 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.2   0.00071       1.2      26      61 ..      37      72 ..      34      74 .. 0.92
   2 ?    2.5   0.1     0.077   1.3e+02      22      32 ..     119     129 ..     119     133 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00071
                HHHHHHHHHHHHHHHHH.......HHHHHHHHHHHH CS
  PF00170.16 26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                +++ee+  k+++L+a++++    ++ + ke+++l+ 
  MMETSP1325-20131115|1060_1 37 ESLEEYDAKIDKLKAQMDEHTHSAKDIHKEIEQLQE 72
                6799****************************9975 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.077
                 HHHHHHHHHHH CS
  PF00170.16  22 qRKkaeieeLe 32 
                 ++K+a++eeL+
  MMETSP1325-20131115|1060_1 119 EKKQARVEELQ 129
                 69********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1178  (0.0861615); expected 273.4 (0.02)
Passed bias filter:                      990  (0.0724108); expected 273.4 (0.02)
Passed Vit filter:                       212  (0.0155061); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.65u 0.44s 00:00:01.09 Elapsed: 00:00:00.65
# Mc/sec: 689.41
//
Query:       MMETSP1325-20131115|1062_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.68
# Mc/sec: 250.21
//
Query:       MMETSP1325-20131115|1063_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.57
# Mc/sec: 218.98
//
Query:       MMETSP1325-20131115|1061_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-05   21.7  13.3         14    6.1   0.0    5.1  3  PF00560.28 Leucine Rich Repeat
     0.0025   17.6   4.0      0.085   12.7   1.0    2.6  3  PF05725.7  FNIP Repeat
  ------ inclusion threshold ------
      0.025   14.2   0.0         11    5.7   0.0    3.1  3  PF05771.6  Poxvirus A31 protein
      0.051   12.7   0.9         19    4.5   0.0    3.6  4  PF12841.2  YvrJ protein family
       0.16   11.5   1.2        8.3    6.1   0.0    3.4  4  PF05322.6  NINE Protein
       0.25   10.9   3.6         15    5.2   0.1    3.0  3  PF13013.1  F-box-like domain
       0.52    9.8  16.8        1.9    8.1   4.0    4.0  3  PF12799.2  Leucine Rich repeats (2 copies)
        1.7    8.8  17.6         25    5.2   0.1    5.2  4  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0     0.008        14       2      20 ..       4      23 ..       3      25 .. 0.84
   2 !    5.9   0.2    0.0089        15       3      16 ..      28      46 ..      27      50 .. 0.77
   3 ?    4.3   3.5     0.031        53       1       1 [.      92      92 ..      48     116 .. 0.53

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.008
                ESEEEETSS.BCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppsls 20
                ++ L+L g+ +l+ ++   ++
  MMETSP1325-20131115|1061_1  4 ITDLNLCGCkKLEgNIEV-FK 23
                678*********999988.76 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0089
                SEEEETSS.BCB.C...HH CS
  PF00560.28  3 eeLdLsgN.nlt.s...lp 16
                e+L+L+++  l+ +   lp
  MMETSP1325-20131115|1061_1 28 ETLNLQDCsELQgNikdLP 46
                89******99998844444 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.031
                T CS
  PF00560.28  1 n 1 
                +
  MMETSP1325-20131115|1061_1 92 S 92
                2 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.1    0.0055       9.4      29      41 ..      42      54 ..      25      57 .. 0.63
   2 !   12.7   1.0   4.9e-05     0.085       7      42 ..      42      77 ..      39      79 .. 0.89
   3 !   11.5   0.4   0.00011      0.19       7      41 ..      64      98 ..      59     101 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0055
   PF05725.7 29 igsLPnSlkeLyF 41
                i  LPnS++ L++
  MMETSP1325-20131115|1061_1 42 IKDLPNSITDLNL 54
                4446666666655 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 4.9e-05
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyFg 42
                i  LP++++ L+l +  n + +i  LP+S++ L++ 
  MMETSP1325-20131115|1061_1 42 IKDLPNSITDLNLENCRNLQGNIKDLPQSITDLNLE 77
                668**********888899999***********986 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 0.00011
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyF 41
                i  LP++++ L+l +  + + +i  LP+S++ L +
  MMETSP1325-20131115|1061_1 64 IKDLPQSITDLNLEKCWKLEGNIKDLPQSITDLDL 98
                678***************999**********9976 PP

>> PF05771.6  Poxvirus A31 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0066        11      86     107 ..      37      58 ..       5      61 .. 0.86
   2 ?    4.1   0.0      0.02        35      87     107 ..      60      78 ..      57      82 .. 0.84
   3 ?    2.0   0.0     0.088   1.5e+02      87     104 ..      82      99 ..      79     106 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0066
   PF05771.6  86 sleGkiykLGksikdLslrerk 107
                  l+G+i+ L +si+dL+l++ +
  MMETSP1325-20131115|1061_1  37 ELQGNIKDLPNSITDLNLENCR 58 
                 468***************8766 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.02
   PF05771.6  87 leGkiykLGksikdLslrerk 107
                 l+G+i+ L +si+dL+l+  k
  MMETSP1325-20131115|1061_1  60 LQGNIKDLPQSITDLNLE--K 78 
                 78**************94..3 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.088
   PF05771.6  87 leGkiykLGksikdLslr 104
                 leG+i+ L +si+dL l 
  MMETSP1325-20131115|1061_1  82 LEGNIKDLPQSITDLDLV 99 
                 68*************985 PP

>> PF12841.2  YvrJ protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.2   5.5e+03      29      35 ..       2       8 ..       2       8 .. 0.78
   2 ?    1.7   0.0     0.081   1.4e+02      27      38 .]      38      49 ..      35      55 .. 0.64
   3 ?    2.7   0.0     0.041        71      27      38 .]      60      71 ..      58      77 .. 0.59
   4 ?    4.5   0.0     0.011        19      19      34 ..      81      96 ..      80      99 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 3.2
   PF12841.2 29 ksIneLs 35
                +sI++L+
  MMETSP1325-20131115|1061_1  2 QSITDLN 8 
                6899985 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.081
   PF12841.2 27 LtksIneLskai 38
                L+  I++L+++i
  MMETSP1325-20131115|1061_1 38 LQGNIKDLPNSI 49
                556666666655 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.041
   PF12841.2 27 LtksIneLskai 38
                L+  I++L+++i
  MMETSP1325-20131115|1061_1 60 LQGNIKDLPQSI 71
                555566665554 PP

  == domain 4    score: 4.5 bits;  conditional E-value: 0.011
   PF12841.2 19 RiEkkldaLtksIneL 34
                ++E+ +++L +sI++L
  MMETSP1325-20131115|1061_1 81 KLEGNIKDLPQSITDL 96
                5799999999999999 PP

>> PF05322.6  NINE Protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.33   5.6e+02       6      19 ..       2      15 ..       1      29 [. 0.80
   2 ?    6.1   0.0    0.0049       8.3       7      19 ..      48      60 ..      45      63 .. 0.90
   3 ?    0.8   0.0      0.22   3.7e+02       6      17 ..      69      80 ..      64      84 .. 0.86
   4 ?   -1.0   0.0      0.78   1.3e+03       7      15 ..      92     103 ..      89     105 .. 0.65

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.33
   PF05322.6  6 RsitDiiCEnCKYL 19
                 sitD+    CK L
  MMETSP1325-20131115|1061_1  2 QSITDLNLCGCKKL 15
                59999977788876 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0049
   PF05322.6  7 sitDiiCEnCKYL 19
                sitD+  EnC+ L
  MMETSP1325-20131115|1061_1 48 SITDLNLENCRNL 60
                9*********976 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.22
   PF05322.6  6 RsitDiiCEnCK 17
                 sitD+  E C 
  MMETSP1325-20131115|1061_1 69 QSITDLNLEKCW 80
                59****999995 PP

  == domain 4    score: -1.0 bits;  conditional E-value: 0.78
   PF05322.6   7 sitD...iiCEn 15 
                 sitD   + CEn
  MMETSP1325-20131115|1061_1  92 SITDldlVGCEN 103
                 899833334887 PP

>> PF13013.1  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.009        15      21      38 ..      41      58 ..      27      61 .. 0.83
   2 ?    3.9   0.0     0.022        37      21      39 ..      63      81 ..      58      84 .. 0.84
   3 ?    2.2   0.0     0.073   1.3e+02      21      39 ..      85     103 ..      81     118 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.009
   PF13013.1 21 tllDLPdellelIfnyCk 38
                 + DLP+ +  l +++C 
  MMETSP1325-20131115|1061_1 41 NIKDLPNSITDLNLENCR 58
                69***************7 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.022
   PF13013.1 21 tllDLPdellelIfnyCkd 39
                 + DLP+ +  l ++ C +
  MMETSP1325-20131115|1061_1 63 NIKDLPQSITDLNLEKCWK 81
                599************9976 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.073
   PF13013.1  21 tllDLPdellelIfnyCkd 39 
                  + DLP+ +  l + +C++
  MMETSP1325-20131115|1061_1  85 NIKDLPQSITDLDLVGCEN 103
                 589******9999999976 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       0.3   5.1e+02      26      35 ..       4      13 ..       2      23 .. 0.60
   2 ?    8.1   4.0    0.0011       1.9       4      26 ..      28      60 ..      27      62 .. 0.78
   3 ?    2.0   5.3     0.089   1.5e+02       4      22 ..      50      78 ..      48     109 .. 0.69

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.3
   PF12799.2 26 LktLnLsnNp 35
                 + LnL +++
  MMETSP1325-20131115|1061_1  4 ITDLNLCGCK 13
                4556666663 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0011
   PF12799.2  4 evLdLsnN.....nIkdlppe.....lanLpnL 26
                e+L+L+++     nIkdlp++     l n++nL
  MMETSP1325-20131115|1061_1 28 ETLNLQDCselqgNIKDLPNSitdlnLENCRNL 60
                89******7887779999988666667777777 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.089
   PF12799.2  4 evLdLsnN.....nIkdlppe.....lan 22
                + L+L n+     nIkdlp +     l +
  MMETSP1325-20131115|1061_1 50 TDLNLENCrnlqgNIKDLPQSitdlnLEK 78
                66888888777777888887733333333 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.014        25       2      13 ..       2      13 ..       1      21 [. 0.84
   2 ?    3.5   0.2      0.05        86       4      13 ..      27      36 ..      27      45 .. 0.85
   3 ?    4.7   0.8     0.022        37       2      13 ..      47      58 ..      45      68 .. 0.82
   4 ?    2.8   1.0     0.089   1.5e+02       3      12 ..      70      79 ..      63     114 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.014
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L +++
  MMETSP1325-20131115|1061_1  2 QSITDLNLCGCK 13
                689********8 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.05
   PF13516.1  4 LtsLdLsnNq 13
                +++L+L+++ 
  MMETSP1325-20131115|1061_1 27 IETLNLQDCS 36
                69*****995 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.022
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L n+ 
  MMETSP1325-20131115|1061_1 47 NSITDLNLENCR 58
                579*******96 PP

  == domain 4    score: 2.8 bits;  conditional E-value: 0.089
   PF13516.1  3 nLtsLdLsnN 12
                ++t+L+L ++
  MMETSP1325-20131115|1061_1 70 SITDLNLEKC 79
                6788888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.69
# Mc/sec: 420.23
//
Query:       MMETSP1325-20131115|1057_1  [L=564]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-33  115.4   1.4    6.2e-33  114.6   1.0    1.3  1  PF03747.9  ADP-ribosylglycohydrolase
    0.00011   22.1  11.8    0.00021   21.1   8.2    1.4  1  PF02148.14 Zn-finger in ubiquitin-hydrolases and other protein
  ------ inclusion threshold ------
      0.075   12.6   6.2          1    8.9   0.4    2.7  2  PF04360.7  Serglycin


Domain annotation for each model (and alignments):
>> PF03747.9  ADP-ribosylglycohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   1.0   1.4e-36   6.2e-33       1     222 [.     279     536 ..     279     559 .. 0.80

  Alignments for each domain:
  == domain 1    score: 114.6 bits;  conditional E-value: 1.4e-36
                 --------------TTTT..--HH...HHHHH-----S--S--STT----------HHHHHHHHHHHCHH...-H-HHHHHHHHHHHHHC..............T--S----HHHHHHHHCHH--...........--B---GCC-CCHHHCCTSTHCCHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHTT--CCHHHHCH............................HHHHCCT-HHHHHHHHHHHG---HCH..... CS
   PF03747.9   1 gallGlavGDAlGlpvef..wsyd...rirraygeggeeggigggghggkkagdwtddtqmalllaesllengeldeedfaarllarWletp..........gdtaprdiGsttraalrnlesgepaaeagaqaansagnGalmRiaplglvlagdpeellelareaarlTHgdpravaaavayaaliaallrgkslsealdaa..........................keqlataeadeelseeleaaralaesdrvdaee 222
                 ga++G  v+DA G+p+ef  +  +    ++ ++ +    ++ g   ++ +++g+wtdd++m +++a+sl+  ++++  d+  r+  +W   +          g+++  ++G   +++l ++++ge +  + + + ++agnG++mR+ap+++++++d e + +la++++ +TH+ p a +a++++a+li ++++ +  ++++d +                           +    +  + +l+++l+a++   e ++ ++e+
  MMETSP1325-20131115|1057_1 279 GAMVGMPVADAVGAPLEFtpV--QmagPLH-RFDRAS-MSYTGPSNRFMLRPGQWTDDASMGFCIADSLIVCNGYNGSDIRVRFHNWWSGGYnnafrndherGNRSSVGLGGNISQSLFSMREGETPTPTYEADGEDAGNGSIMRLAPIPVAYHRDTEVACDLAAQSSLTTHPGPLAAEACAFMAYLIVRAIHWPASDNDNDDNnnnngggsgggggggggggagddpkgFLDTCVDDYNARLEARLAALTSELENQK-TQEA 536
                 89****************652..4444444.444443.35557788888*********************99***********8885555447******************************8855555555569*********************************************************99766666666577788888888888888888887775666666666667777776666666666.3333 PP

>> PF02148.14  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   8.2   4.7e-08   0.00021       1      59 [.      53     115 ..      53     119 .. 0.90

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 4.7e-08
  PF02148.14   1 CseCnsenknlWlCLkCg..hvgCgrksnghalkHyeetg..Hplavdlstlsvycyscddev 59 
                 C+ C++  ++  lCL C    v+Cgr+ ng++ kH+++ +   ++ +++ +ls++++ +d ++
  MMETSP1325-20131115|1057_1  53 CQGCKTRTTECQLCLCCPepVVLCGRYVNGCMVKHAQKCHdsKCISISFADLSIWDHGQDAYL 115
                 9****6689999999997336****************98888****************99987 PP

>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.4   0.00023         1      20     124 ..      50     185 ..      43     203 .. 0.63
   2 ?    5.8   0.4     0.002       9.3      92     120 ..     484     515 ..     449     546 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00023
   PF04360.7  20 essvqGyparraryqwvrckpdsnsancieekGpafdlla..eesnkippprtdlspvlrrkd.lnevfplsedy............................sgsgsgsGsGsGsgsGsGflaeleqeyqpvden 124
                 +s  qG  +r +  q   c p+ +        G + +  +   +s+ i+   +dls   + +d   ++f + e                              s    gsG G G gsG G+   le +  p   +
  MMETSP1325-20131115|1057_1  50 DSVCQGCKTRTTECQLCLCCPEPVVLCGRYVNGCMVKHAQkcHDSKCISISFADLSIWDHGQDaYLDMFNIKELHpvydalhrlkfdepaslptnpssgapptSNGDGGSGGGGGGGSGGGYTLRLEIKSDPHAAE 185
                 5666666666666666666666655544445555544433114555666666666544443331345555555545555568888888888888888888887666668999999999999988888776665555 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.002
   PF04360.7  92 sgsgsgsGsGsGsgsG...sGflaeleqeyqp 120
                  gsg g G G G g+G    Gfl     +y+ 
  MMETSP1325-20131115|1057_1 484 GGSGGGGGGGGGGGAGddpKGFLDTCVDDYNA 515
                 33333333333333332224677766666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.94u 0.37s 00:00:01.31 Elapsed: 00:00:00.82
# Mc/sec: 1648.23
//
Query:       MMETSP1325-20131115|1065_1  [L=540]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-55  185.7   1.2      8e-55  184.9   0.8    1.4  1  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
    1.6e-20   72.4   0.0    2.7e-20   71.7   0.0    1.4  1  PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
    8.5e-06   25.2   1.3    0.00035   19.9   0.2    2.2  2  PF00009.22 Elongation factor Tu GTP binding domain
      0.002   18.0   0.2     0.0048   16.7   0.2    1.7  1  PF01926.18 50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.013   15.1   0.3      0.022   14.4   0.2    1.3  1  PF11965.3  Domain of unknown function (DUF3479)
       0.02   14.4   0.0      0.039   13.5   0.0    1.4  1  PF01637.13 Archaeal ATPase
      0.021   14.3   0.1      0.062   12.8   0.1    1.7  2  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
      0.035   13.2   2.1      0.079   12.0   1.3    1.7  1  PF12846.2  AAA-like domain
      0.041   13.4   0.9      0.092   12.3   0.0    2.0  2  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
      0.044   13.7   0.0      0.082   12.9   0.0    1.5  1  PF13401.1  AAA domain
      0.051   12.9   0.2       0.15   11.4   0.2    1.8  1  PF13555.1  P-loop containing region of AAA domain
      0.056   12.9   0.0       0.46    9.9   0.0    2.4  2  PF01443.13 Viral (Superfamily 1) RNA helicase
      0.066   12.9   0.0       0.15   11.8   0.0    1.6  1  PF13173.1  AAA domain
      0.077   12.6   0.7       0.17   11.5   0.5    1.5  1  PF13245.1  Part of AAA domain


Domain annotation for each model (and alignments):
>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.9   0.8   8.2e-58     8e-55       1     177 [.     217     402 ..     217     403 .. 0.95

  Alignments for each domain:
  == domain 1    score: 184.9 bits;  conditional E-value: 8.2e-58
                 EEEEEE-------HHHHHHHHCHS---S-EEEEES-----HCCCCCHHT-...S-.EEEE----ECC-TTS-HHHHHCCCHHHCH-T-SEEEEE----SGGGGH..HHH.SHHHHHHEEE-EEEEEEETTTH......CHHHHHHHHHHHHHCT-SEEEEE-CCCTTTT..HHHHHHHHHHH-TTSEEE CS
  PF02492.14   1 pvtvltGflGsGKTtLleklleknreglkiaVivndfgetkiDaellret...gveivelnnGciCctlredllmelealeelkeerldvlliEttGlaepapl..tft.eeelksdlgldavvtvvdvknl......tegedkpekledqlaaAdlivlnKiDlldaeadlekleedlrklnpeakvl 177
                 pvtvltGflGsGKTtL++++l + ++g+kiaVi+n+fge++iD +l+++t   ++ei+e+nnGciCct+r dl++ l++l +++ + ld +liEttG+a+pap+  tf  +e+++++++lda+ tvvd+k++      ++ e  ++++ +q+ +Ad ++lnK+Dl+++e+  +++e+++r+ln++a++l
  MMETSP1325-20131115|1065_1 217 PVTVLTGFLGSGKTTLMNNIL-NGSHGKKIAVIENEFGEIGIDDSLVSSTinaDEEIFEMNNGCICCTVRGDLIRILNKLLSRP-NPLDGVLIETTGMADPAPVaqTFFvDEQIQANMKLDAILTVVDAKHVvqhldeEKPEGAENEAIEQILFADKVILNKMDLVNEEEA-AEVERRIRELNQHAPIL 402
                 79*******************.999**********************999655566****************************.88*****************775557**************************988889999************************76.9*************997 PP

>> PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.0   2.7e-23   2.7e-20       2      94 .]     446     539 ..     445     539 .. 0.92

  Alignments for each domain:
  == domain 1    score: 71.7 bits;  conditional E-value: 2.7e-23
   PF07683.9   2 ssfvfrarrpfdperleallee....lpegvlRaKGivwlagkpdalvlqgvggrlrlepagawwaaledgdrrseLVfIGrdldkealeeaLdacl 94 
                 +s+ +++ ++ d ++l+a++++    ++ +++R+KG++ ++++++++v+qgv++ ++     ++wa+  d++r ++LVfIG++l++++le+++++cl
  MMETSP1325-20131115|1065_1 446 NSVGITQAGECDLAKLNAWFSKllqeKGVDIYRMKGVLAIKDSAEKFVFQGVHMLFDAA-PLKPWAT--DEARVNKLVFIGKNLNRSELEAQFASCL 539
                 688899999*************99888899*****************************.5555666..6**************************7 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.026        25       9      29 ..     222     242 ..     215     270 .. 0.79
   2 !   19.9   0.2   3.6e-07   0.00035      83     151 ..     323     402 ..     320     503 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.026
                 EESTT---HHHHHHHHHHCCC CS
  PF00009.22   9 ighvDhGKtTltdallykaga 29 
                  g + +GKtTl++++l  ++ 
  MMETSP1325-20131115|1065_1 222 TGFLGSGKTTLMNNILNGSHG 242
                 566779**********87765 PP

  == domain 2    score: 19.9 bits;  conditional E-value: 3.6e-07
                 GHHHHHHHHHT-SEEEEEEETTS-S-HHHHHHHHHHHHTT--EEE.....EEE-TTST.CHHHHHHHHHHHHHH......H CS
  PF00009.22  83 FskevirglrvlDgavlvvdaveGvepqTeevlrlakklgvkiiv.....viNKiDrv.eaeleeiveelkekl......l 151
                 F++e i++   lD+ + vvda++ v+   ee  + a+++ ++ i+     ++NK+D+v e+e+ e+ + ++ +l      l
  MMETSP1325-20131115|1065_1 323 FVDEQIQANMKLDAILTVVDAKHVVQHLDEEKPEGAENEAIEQILfadkvILNKMDLVnEEEAAEVERRIR-ELnqhapiL 402
                 9999**************************************6642334379******9566666665555.442333541 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.2   4.9e-06    0.0048       3      94 ..     220     358 ..     218     406 .. 0.63

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 4.9e-06
                 EEE--TT---HHHHHHHHCSTCTE..................ETS-TT-SSSE.SEEEE..................ETTE.....EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS...HHHH.......H CS
  PF01926.18   3 aivGrpNvGKStLinaLtgekaak..................vsdypgtTrdi.tenev..................kkek.....iilvDtPGiiegasedkeiegikkylekveradvlllvvdasa...vlke.......a 94 
                 ++ G   +GK+tL+n +++ +  k                  vs +    ++i + n+                      +      +l+ t G++++a+ ++   ++++ +++  ++d++l vvda++   +          a
  MMETSP1325-20131115|1065_1 220 VLTGFLGSGKTTLMNNILNGSHGKkiavienefgeigiddslVSSTINADEEIfEMNNGcicctvrgdlirilnkllS--RpnpldGVLIETTGMADPAPVAQT-FFVDEQIQANMKLDAILTVVDAKHvvqH--LdeekpegA 358
                 688999************743222223344444444444444555544444442222224555555555665444330..14443349*******999888884.4777888888999********9885441..122344442 PP

>> PF11965.3  Domain of unknown function (DUF3479)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.2   2.3e-05     0.022      35     121 ..     348     434 ..     324     448 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.3e-05
   PF11965.3  35 vfaaeeleeepealeelkeaiarADivfasl..lfleelvraleealearrekcdavivfssapevmkltrlGkfsmskeksgaakllk 121
                 ++ +ee    + a +e+ e+i  AD v+ +   l  ee +  +e+++++ +++ +++ + +s+ e+ +   +G f++++  ++++++l 
  MMETSP1325-20131115|1065_1 348 QHLDEEK--PEGAENEAIEQILFADKVILNKmdLVNEEEAAEVERRIRELNQHAPILKCQNSKVELTEIMNVGAFDLDRVLESEPDFLD 434
                 4444432..22345678889999**999997234679****************************************998888888875 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     4e-05     0.039      21      51 ..     217     247 ..     209     275 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4e-05
                 SEEEEE--TT---HHHHHHHHHH-..---HH CS
  PF01637.13  21 siiviyGprrsGKTaLlkeileelkekgkrv 51 
                 +++v+ G  +sGKT+L++ il+    k++ v
  MMETSP1325-20131115|1065_1 217 PVTVLTGFLGSGKTTLMNNILNGSHGKKIAV 247
                 789*******************996655544 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   6.3e-05     0.062      17      45 ..     218     247 ..     208     253 .. 0.83
   2 ?   -3.2   0.0       5.5   5.4e+03      66      76 ..     474     484 ..     473     495 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.3e-05
  PF02367.12  17 vvlLsGdlGaGKTtlvkglakgl.gvkgev 45 
                 v +L+G lG+GKTtl+ ++++g  g+k +v
  MMETSP1325-20131115|1065_1 218 VTVLTGFLGSGKTTLMNNILNGShGKKIAV 247
                 789****************99975655555 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 5.5
  PF02367.12  66 lDlYRledkee 76 
                 +D+YR++    
  MMETSP1325-20131115|1065_1 474 VDIYRMKGVLA 484
                 79***997655 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.3   8.1e-05     0.079       2      25 ..     217     240 ..     217     402 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.1e-05
   PF12846.2   2 pntlilGppGsGKSvllkklvlql 25 
                 p t+++G +GsGK++l+++++ + 
  MMETSP1325-20131115|1065_1 217 PVTVLTGFLGSGKTTLMNNILNGS 240
                 57899***************8764 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   9.5e-05     0.092       1      32 [.     217     248 ..     217     259 .. 0.75
   2 ?   -1.9   0.1       2.3   2.2e+03      72     108 ..     325     365 ..     316     397 .. 0.55

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 9.5e-05
                 -EEEEE-------HHHHHHHHHHHHH------ CS
   PF03205.9   1 pivavvGpkdsGKTtlieklvnklkergyrva 32 
                 p+ +++G+ +sGKTtl+  ++n    +++ v+
  MMETSP1325-20131115|1065_1 217 PVTVLTGFLGSGKTTLMNNILNGSHGKKIAVI 248
                 567889***************98875554443 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 2.3
                 EEE-SSS----HHHHHHCS-.......-S-EEEE---S.--SEE CS
   PF03205.9  72 vtgfllekeadLeallsvls.......vDlvlveGfkspkenpk 108
                 ++++  + +++L+a+l v++       +D    eG  + +++++
  MMETSP1325-20131115|1065_1 325 DEQI--QANMKLDAILTVVDakhvvqhLDEEKPEGAEN-EAIEQ 365
                 5556..77777777777776555444555555555555.44444 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.4e-05     0.082       6      35 ..     218     247 ..     215     352 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 8.4e-05
   PF13401.1   6 ilvvtGesGvGKTtllrrlarqldeeaeaa 35 
                 ++v+tG  G+GKTtl++++++  + +++a 
  MMETSP1325-20131115|1065_1 218 VTVLTGFLGSGKTTLMNNILNGSHGKKIAV 247
                 579*****************9876555544 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   0.00016      0.15      24      41 ..     217     234 ..     208     242 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00016
   PF13555.1  24 kntlltGasGsGKSTllD 41 
                  +t+ltG  GsGK+Tl+ 
  MMETSP1325-20131115|1065_1 217 PVTVLTGFLGSGKTTLMN 234
                 479*************96 PP

>> PF01443.13  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.1     2e+03     105     138 ..     121     158 ..     115     188 .. 0.69
   2 ?    9.9   0.0   0.00047      0.46       2      22 ..     220     248 ..     219     347 .. 0.71

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 2.1
  PF01443.13 105 fllahlpssl..shrvgrrttyllpslvaeilsak..g 138
                 fl ++l++ +   +r++   t+++p++++ +++     
  MMETSP1325-20131115|1065_1 121 FLQPQLNKAIklADRETSPLTDRNPKDFILFKKGEfvP 158
                 55566665555588999999999999999988766553 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00047
  PF01443.13   2 vvhGvpGcGKStlirkllrt........l 22 
                 v +G+ G+GK+tl  ++l+         +
  MMETSP1325-20131115|1065_1 220 VLTGFLGSGKTTLMNNILNGshgkkiavI 248
                 789***************98444443330 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00015      0.15       3      34 ..     217     247 ..     215     281 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00015
   PF13173.1   3 kilvitGpRrvGKttllkqlakellkeesily 34 
                 +++v+tG  ++GKttl++++++     ++i  
  MMETSP1325-20131115|1065_1 217 PVTVLTGFLGSGKTTLMNNILNGSH-GKKIAV 247
                 689*****************97776.333333 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.5   0.00017      0.17       8      30 ..     213     235 ..     206     248 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00017
   PF13245.1   8 a.gnpllvvtGgPGtGKTttlaai 30 
                   + p++v+tG  G+GKT tl + 
  MMETSP1325-20131115|1065_1 213 PaKVPVTVLTGFLGSGKT-TLMNN 235
                 356899************.55554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      481  (0.0351814); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.97u 0.40s 00:00:01.37 Elapsed: 00:00:00.69
# Mc/sec: 1875.41
//
Query:       MMETSP1325-20131115|1067_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       417  (0.0305003); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 548.98
//
Query:       MMETSP1325-20131115|1066_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-33  113.2  13.4    5.7e-33  112.6   9.3    1.3  1  PF00935.14 Ribosomal protein L44


Domain annotation for each model (and alignments):
>> PF00935.14  Ribosomal protein L44
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.6   9.3   4.2e-37   5.7e-33       1      77 []      26     102 ..      26     102 .. 0.99

  Alignments for each domain:
  == domain 1    score: 112.6 bits;  conditional E-value: 4.2e-37
                 EEEEEEEEE----------HHHHHHHH--------TTS----.--SSBB--EEEE------EEE----BB---EEE- CS
  PF00935.14   1 kHtehkVeqykkgkaselaqgkRrydrkqkGygGqtkpvpkkkaKttKkidlrleCteCkkahlkklkRakkfelve 77 
                 kHt hkV+qyk+gkas++aqgkRryd+kq+G+gGqtkpv++kkaKttKk+++rleC++Ck++++  lkR+k+fel+e
  MMETSP1325-20131115|1066_1  26 KHTVHKVTQYKAGKASSFAQGKRRYDEKQQGFGGQTKPVFHKKAKTTKKVTIRLECKDCKTKKQLVLKRCKHFELGE 102
                 8*************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       730  (0.0533938); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.62
# Mc/sec: 429.03
//
Query:       MMETSP1325-20131115|1068_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   12.8   0.6        0.1   12.2   0.4    1.2  1  PF07543.7 Protein trafficking PGA2


Domain annotation for each model (and alignments):
>> PF07543.7  Protein trafficking PGA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.4   7.4e-06       0.1      51     106 ..     130     182 ..     102     184 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 7.4e-06
   PF07543.7  51 aeaeaeraekakisanalrgaatagelevedtddEedeedvaeasavaeWGkkARk 106
                 a      a++ ++   + +g+a++ge e+ ++d+E +e+   eas  + +G +A k
  MMETSP1325-20131115|1068_1 130 A--TTTTAGSVTLPGVSSHGEAEEGE-ESKENDEEGEESSASEASPAFAFGSQAPK 182
                 3..2334677888888999******9.9999****888899999999****99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.69
# Mc/sec: 659.87
//
Query:       MMETSP1325-20131115|1070_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       430  (0.0314511); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.70
# Mc/sec: 349.18
//
Query:       MMETSP1325-20131115|1072_1  [L=317]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0049   16.4   0.6     0.0077   15.8   0.4    1.2  1  PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
  ------ inclusion threshold ------
      0.029   14.2   6.5        1.5    8.8   2.9    2.7  2  PF08946.5  Osmosensory transporter coiled coil
      0.041   13.2   0.3       0.19   11.0   0.0    2.0  2  PF09195.6  Restriction endonuclease BglII
       0.16   11.6   3.8       0.28   10.8   2.6    1.3  1  PF11023.3  Protein of unknown function (DUF2614)
       0.83    9.9   7.7       0.22   11.7   2.4    2.0  2  PF06156.8  Protein of unknown function (DUF972)
       0.98    9.0   9.4       0.32   10.5   3.9    2.0  2  PF08286.6  Spc24 subunit of Ndc80
        1.3    8.4  16.0      0.098   12.1   7.6    1.6  2  PF00769.14 Ezrin/radixin/moesin family


Domain annotation for each model (and alignments):
>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.4   3.9e-06    0.0077      20     122 ..      27     126 ..      22     131 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3.9e-06
   PF13903.1  20 dprrtnselgeansatnnslfshlglwricfllevdvenesatalldltrvvivflllglvlillaavlallaslkksktlllltgvllllagilillavvly 122
                   +rt++  g+ n ++n+ +++h+   +  + ++vdv++  a++++++++v  v+l+ +++++ll+ +++ ++ l++ ++ +l t  +++++++l+  ++v++
  MMETSP1325-20131115|1072_1  27 ARARTEY--GDRNMQKNKIKLNHNLSQKGISRKPVDVGQAAAYFFWNYNTVESVLLFCCVLVCLLG-IMFESSYLNNTQFEVLGTFTVFIISASLFYYFIVVW 126
                 4566777..888888999999999678888899999999999999999998886666555555555.557778888888889999999999998888888876 PP

>> PF08946.5  Osmosensory transporter coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.014        27       4      25 ..       4      25 ..       2      30 .. 0.87
   2 ?    8.8   2.9   0.00076       1.5      19      39 ..     205     225 ..     197     235 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.014
   PF08946.5  4 eEAkElLqehhdnIEqkIedid 25
                +E  E+ +e+ + IE+   di+
  MMETSP1325-20131115|1072_1  4 SERPEIVREFKEDIERVLADIE 25
                6778************999997 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00076
   PF08946.5  19 qkIedideqIaeLekKRqkLv 39 
                   +e i ++IaeL+kK ++L 
  MMETSP1325-20131115|1072_1 205 EEVERIQHEIAELKKKEKQLL 225
                 579*************99985 PP

>> PF09195.6  Restriction endonuclease BglII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   9.9e-05      0.19      13      58 ..      13      58 ..       7     175 .. 0.84
   2 ?   -0.0   0.2      0.24   4.7e+02      11      37 ..     197     223 ..     191     253 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 9.9e-05
                HHHHHHHHHHH--GGGGB-EE--SSSG---EEBHHHHHH---EEEE CS
   PF09195.6 13 ekkeieeiladfrltlaelkksggkesevtqrlkselqakgWenei 58
                 k++ie++lad++  +a++   + + ++ +++l+++l++kg ++++
  MMETSP1325-20131115|1072_1 13 FKEDIERVLADIETARARTEYGDRNMQKNKIKLNHNLSQKGISRKP 58
                5799*************************************98887 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHHH--GGGGB-EE--SS CS
   PF09195.6  11 pgekkeieeiladfrltlaelkksggk 37 
                 ++e++++ e ++ ++ ++aelkk++++
  MMETSP1325-20131115|1072_1 197 VEEQADLKEEVERIQHEIAELKKKEKQ 223
                 678888888888888888888887654 PP

>> PF11023.3  Protein of unknown function (DUF2614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.6   0.00014      0.28      15      68 ..      76     130 ..      71     147 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00014
   PF11023.3  15 alslvfvgllvmyvgilfkeseiilvillllglllv.iastvvyfwigllstkav 68 
                   +l+f  +lv  +gi+f +s +  + + +lg+++v i s+ ++++  ++ t  +
  MMETSP1325-20131115|1072_1  76 ESVLLFCCVLVCLLGIMFESSYLNNTQFEVLGTFTVfIISASLFYYFIVVWTEII 130
                 55799***************************87653455555555445555555 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1         1     2e+03      10      32 ..      10      32 ..       4      57 .. 0.55
   2 ?   11.7   2.4   0.00011      0.22      10      58 ..     172     231 ..     165     257 .. 0.71

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 1
   PF06156.8 10 lseleeqleelleeleelkkelk 32
                ++e++e++e++l+++e+ +++++
  MMETSP1325-20131115|1072_1 10 VREFKEDIERVLADIETARARTE 32
                55666666666666665555443 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00011
   PF06156.8  10 lseleeqleelleeleelkkelkelleenaelkleneklrerleelee...........e 58 
                 ++++++q + +   +++l  + + ++ee+a lk e+e+++++++el++           +
  MMETSP1325-20131115|1072_1 172 MADISTQANPMAMGMDKLDGHRQMTVEEQADLKEEVERIQHEIAELKKkekqllleeakK 231
                 567888899999999999999999999999999999999999999988444444432220 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       0.7   1.4e+03      15      44 ..      21      50 ..      12      65 .. 0.59
   2 ?   10.5   3.9   0.00016      0.32       2      46 ..     187     238 ..     186     255 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.7
   PF08286.6 15 lndleselenlqseleelkeeleeleeqen 44
                l+d+e++  + ++ + +++++  +l+ +++
  MMETSP1325-20131115|1072_1 21 LADIETARARTEYGDRNMQKNKIKLNHNLS 50
                455555555555555555555555555444 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00016
   PF08286.6   2 eeldnekvrlakelndleselenlqseleelkeeleeleeqene.......g 46 
                 ++ld  ++ +++e +dl++e+e++q e++elk+++++l  +e +       +
  MMETSP1325-20131115|1072_1 187 DKLDGHRQMTVEEQADLKEEVERIQHEIAELKKKEKQLLLEEAKkpklavvK 238
                 789999*******************************999998866554431 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       1.3   2.5e+03      46      60 ..      25      39 ..       5      55 .. 0.42
   2 ?   12.1   7.6     5e-05     0.098      46     125 ..     169     247 ..     144     273 .. 0.75

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.3
  PF00769.14 46 eeeaqklekkakele 60
                e ++ ++e   ++++
  MMETSP1325-20131115|1072_1 25 ETARARTEYGDRNMQ 39
                222222222222222 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 5e-05
  PF00769.14  46 eeeaqklekkakeleeekerLeeeaaksekekeeLekevdeaeaevakleeerekkeaeteqlqkelreareaeeeakee 125
                   ++     +a+ +++ +++L  + +++ +e+ +L++ev++++ e+a+l+++ ++   e ++ + +l+ +++++++ +++
  MMETSP1325-20131115|1072_1 169 DFNMADISTQANPMAMGMDKLDGHRQMTVEEQADLKEEVERIQHEIAELKKKEKQLLLEEAK-KPKLAVVKKKKKKMTSA 247
                 44677788999**************************************9877666555444.45566666655555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1815  (0.132753); expected 273.4 (0.02)
Passed bias filter:                      830  (0.060708); expected 273.4 (0.02)
Passed Vit filter:                       126  (0.00921592); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.82u 0.40s 00:00:01.22 Elapsed: 00:00:00.78
# Mc/sec: 973.90
//
Query:       MMETSP1325-20131115|1064_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-37  128.8   0.2    2.5e-37  128.3   0.1    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.3   0.1   1.9e-41   2.5e-37       5     155 ..      57     215 ..      53     216 .. 0.84

  Alignments for each domain:
  == domain 1    score: 128.3 bits;  conditional E-value: 1.9e-41
                 XXXXXXXXXX.XXXXXX.---....-TTTTT--------TTT------------------S--TT--.STT----.-.--S-TT.THHHH---HHHHHHHHTT------.....------------------.-----------STTT----TTTTT------- CS
  PF00504.16   5 ldgslpgdlg.fDplglskdp....tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeaggl.s.lptllalqillligflelareqelkapeseg.....sekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 l+g + +++g fDp+g++ d     ++kr+reaE++HGRvAMl v+G+lv+e +  l +  +++ +pa++   ++ + +p ++     ++ig++e+ r q+ + p+ +       ++++ypG++gfdp gl+ +d++e+ae+++kE+++GRlAM+a +gf++q+
  MMETSP1325-20131115|1064_1  57 LPG-ALEPMGnFDPAGFA-DGcslqEMKRYREAEVTHGRVAMLSVIGFLVAESFHPLFG--GEIIGPAIDHLTEVrKvQPEFF-ELLAIAIGIVETSRAQNGWVPPAQVqgkqfLNEDYYPGDIGFDPAGLKpTDAAEFAEMQTKELQHGRLAMLASMGFIAQE 215
                 566.5677789******8.556999***************************8866443..4455677554222323345554.5999************999988776899998899*********************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 975.66
//
Query:       MMETSP1325-20131115|1073_1  [L=365]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-73  246.0   0.0    3.6e-73  245.8   0.0    1.0  1  PF00928.16 Adaptor complexes medium subunit family


Domain annotation for each model (and alignments):
>> PF00928.16  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.8   0.0   2.6e-77   3.6e-73       4     263 .]      99     365 .]      96     365 .] 0.94

  Alignments for each domain:
  == domain 1    score: 245.8 bits;  conditional E-value: 2.6e-77
                 ----------EEEEEEEEEEEEEE-----EEEEEEE-EEEEEE------EEEE---SS-B-....-----B-SEEEEETT-B-TTHHHH--EEE------EEEEEEEB-S-S--SEEEEEEEE.-----EEEEEEEEE-S-TT--BEEEEEEE------EEEEE--STT....EEEE---..-EEEEE--B--.......-EE---EEEE----------EEEEEEEET-----------EEE--------EEEEEEEEEEEEEEE-- CS
  PF00928.16   4 rpsgikykknevyldviEkvsvlvdkdgkllnsevqGtialkskLsGmpevklsLndelni....ekkgielddvsfHpcVrlskfeservisFiPpdgefeLmrYrvseesklplklecqvkeeskgrievnvklesqlkrklslenvkitiplPkevskpvlkvsdG....kakydseenvleWsikklpgekehalsgelelsaeqekeekdrekppvsveFsipgataSglkVrslkvsekkenvkpykwVryvtksgkysvri 263
                 ++++   +kne+++d++E+++vl++++g +lns ++G i++ks+LsG+pe++l+Ln++l i       ++ ldd++fH+cV+l+ fe++r++sFiPpdgef++++Yrv+ e + p+++++ + e s  +++v+++ ++++++++   nv+i+ip+P+++ + + ++++     +a+y ++++ + W+ikk++g++e +++++++ls+   +++++ e +p+s++F++p++++S+l Vr+l++ e+ + ++py+wVryvt+s++y+ ri
  MMETSP1325-20131115|1073_1  99 QRERQGKQKNEIFVDILERLNVLFSPNGYVLNSTIDGCIQMKSYLSGNPELRLALNEDLVIgkggAYGSVTLDDCNFHECVQLQDFETSRTLSFIPPDGEFVVLNYRVTGEFRAPFRVFPAIDEVSPYKLDVTIRCRADIPETNYGANVVIRIPVPRNTASASCETAQNavgqQAEYSNTNKHVTWTIKKFQGNTEQTIRVKITLSDPATTNTRK-EIGPISLNFEVPMYNVSNLAVRYLRIAEQGKAYNPYRWVRYVTQSNSYVCRI 365
                 566677899*************************************************98899999999*****************************************************************************************777776664433669***************************999999988876644.68*************************989******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.33s 00:00:01.01 Elapsed: 00:00:00.85
# Mc/sec: 1029.02
//
Query:       MMETSP1325-20131115|1071_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.51
# Mc/sec: 155.06
//
Query:       MMETSP1325-20131115|1076_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 252.03
//
Query:       MMETSP1325-20131115|1069_1  [L=1046]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.3   0.1       0.58    9.4   0.1    1.8  2  PF14248.1 Domain of unknown function (DUF4345)


Domain annotation for each model (and alignments):
>> PF14248.1  Domain of unknown function (DUF4345)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   4.3e-05      0.58      14      70 ..     485     546 ..     483     549 .. 0.90
   2 ?   -2.0   0.0      0.15     2e+03      37      69 ..     579     611 ..     563     614 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 4.3e-05
   PF14248.1  14 vviviGlagvlggastlasgggvlaaa.....asldsefRflaGlylalGllllagiikikk 70 
                 ++i ++++++++g+++l+++ + +++      ++l  + R ++ +++++G +  a+++++k+
  MMETSP1325-20131115|1069_1 485 FPINAAANVTFNGDRYLHAYLAHTFSGssasqLTLSAQARQFSSMLVMVGTISSATSFEPKY 546
                 6889999*********9999888888888888*************************99998 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.15
   PF14248.1  37 laaaasldsefRflaGlylalGllllagiikik 69 
                 ++++ +    fR++   ++ +G+l++ + ++++
  MMETSP1325-20131115|1069_1 579 SPEQQRFAKAFRAMQLASTLFGVLVIQIKPALE 611
                 445556778899999999999999987777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1046 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       554  (0.0405208); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.50u 0.39s 00:00:01.89 Elapsed: 00:00:00.83
# Mc/sec: 3019.99
//
Query:       MMETSP1325-20131115|1078_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.62
# Mc/sec: 235.77
//
Query:       MMETSP1325-20131115|1075_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-12   46.5   0.0      3e-12   46.2   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.0   2.2e-16     3e-12     140     245 ..       9     117 ..       4     119 .. 0.90

  Alignments for each domain:
  == domain 1    score: 46.2 bits;  conditional E-value: 2.2e-16
                 --B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-...HHHHTTS-HHHHHHHH-----..--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHH CS
  PF00632.20 140 nipVtnenkeeYiklyvnyllkesvkkqleafrkGfsevip...tealklftpeelellicGsdk.lidvedlrrnteydggynansptienlweilkefspeerrlfLk 245
                 + +Vt e   e++  +     +++++ q+ ++r G+ +v+    +++l++++p+el+l++ G+ +  ++v+ l +++  + g++ +s+  ++l+e+l ef++++r +f++
  MMETSP1325-20131115|1075_1   9 SECVTVETSGEFVASVLA-AWESGLEAQTLSLRAGLADVLGwhwRRSLAVLSPKELQLVLFGDLTaEWTVDTLASSVLPGFGFTTSSNPYKWLLEVLFEFNSQQRVAFIQ 117
                 568999999999998875.77889****************955567799*************887668****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.65
# Mc/sec: 449.78
//
Query:       MMETSP1325-20131115|1084_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.27   10.8   1.9         32    4.1   0.0    3.7  4  PF13220.1 Protein of unknown function (DUF4028)


Domain annotation for each model (and alignments):
>> PF13220.1  Protein of unknown function (DUF4028)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.013   1.8e+02      31      50 ..      34      53 ..      22      62 .. 0.77
   2 ?    1.0   0.0     0.021   2.9e+02      38      46 ..     105     113 ..      97     116 .. 0.81
   3 ?    4.1   0.0    0.0023        32      40      53 ..     120     133 ..     117     146 .. 0.85
   4 ?   -0.1   0.0     0.047   6.4e+02       5      20 ..     140     155 ..     135     166 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.013
   PF13220.1 31 rkqenkeelGrPtfkevekd 50
                 kq+  +el r  fk + k+
  MMETSP1325-20131115|1084_1 34 TKQDITDELIRSMFKKLVKE 53
                5889999999*999987664 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.021
   PF13220.1  38 elGrPtfke 46 
                   GrPtf e
  MMETSP1325-20131115|1084_1 105 SEGRPTFSE 113
                 459****88 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.0023
   PF13220.1  40 GrPtfkevekdwke 53 
                 Gr  f e+ kdw +
  MMETSP1325-20131115|1084_1 120 GRDVFAELAKDWDQ 133
                 899*********75 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 0.047
   PF13220.1   5 ilkdssnsflctvqnk 20 
                 +lkd+s s l  ++ k
  MMETSP1325-20131115|1084_1 140 LLKDTSASGLACLKAK 155
                 69******99887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.67
# Mc/sec: 640.22
//
Query:       MMETSP1325-20131115|1085_1  [L=513]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0014   18.4   0.0     0.0024   17.6   0.0    1.4  1  PF03828.14 Cid1 family poly A polymerase


Domain annotation for each model (and alignments):
>> PF03828.14  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.8e-07    0.0024       2      60 .]     151     215 ..     150     215 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.8e-07
                 ---HHHHHHHH---.-----SEEB-------EEGGG-GGG-........S-.S-SSS--BB----TTS CS
  PF03828.14   2 lgeLLigFFeyYgs.eFdyenvvisirtggilskkekgwes........nkernrfllaIeDPfeldn 60 
                 +g LL+ F++ Yg+  Fd ++  +s++  g l      w+         n      + +I DP +++n
  MMETSP1325-20131115|1085_1 151 VGALLVSFLQVYGTfGFDIRRFCVSLSPAGPLMPLGPPWVPkvgtsaffN---PAPPVVILDPINTQN 215
                 89***********88*************9999999999999888854332...456899999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.59s 00:00:01.29 Elapsed: 00:00:00.93
# Mc/sec: 1321.86
//
Query:       MMETSP1325-20131115|1087_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.18   11.4   3.8        7.5    6.2   0.0    2.9  3  PF03840.9 Preprotein translocase SecG subunit


Domain annotation for each model (and alignments):
>> PF03840.9  Preprotein translocase SecG subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0   0.00055       7.5      37      68 ..       5      36 ..       1      40 [. 0.83
   2 ?    0.1   0.1     0.043   5.9e+02      20      47 ..     114     139 ..     114     142 .. 0.64
   3 ?    4.6   0.4    0.0017        23      22      51 ..     140     169 ..     138     171 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.00055
   PF03840.9 37 asqslfgsrkaenfLtklTavlavlFfvlsll 68
                +++ l +++++++f+++ T++  v ++vl ++
  MMETSP1325-20131115|1087_1  5 QKGALKTRSRSKSFMDRKTTINDVSWMVLKMA 36
                5556677889*****************99765 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.043
   PF03840.9  20 LlQsgkgaglggafgggasqslfgsrka 47 
                 LlQ++ +  lg + ++++  ++ +s+++
  MMETSP1325-20131115|1087_1 114 LLQKSAS--LGTTSSSSTLPTVISSKRK 139
                 5666666..6666677776788777755 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.0017
   PF03840.9  22 QsgkgaglggafgggasqslfgsrkaenfL 51 
                 Qs kg+  g +f g + ++l+g +++e  L
  MMETSP1325-20131115|1087_1 140 QSRKGSNHGKLFKGATAKNLLGGNSTEAKL 169
                 999************999*****9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       485  (0.035474); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.51s 00:00:00.95 Elapsed: 00:00:00.65
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|1090_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.48s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 260.66
//
Query:       MMETSP1325-20131115|1091_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 331.50
//
Query:       MMETSP1325-20131115|1092_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00057   19.7   0.0    0.00058   19.6   0.0    1.1  1  PF07992.9 Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.049   13.2   0.0      0.075   12.6   0.0    1.3  1  PF10803.3 Protein of unknown function (DUF2539)


Domain annotation for each model (and alignments):
>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   8.4e-08   0.00058     168     197 ..      23      53 ..       6      56 .. 0.79

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 8.4e-08
                 --BESSSSBBE-TTSBCS...STTEEE---TCE CS
                 xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxx RF
   PF07992.9 168 veldprggivVdeylrts...vpgiyaiGDvae 197
                  + +prg +vVd++lr++   + +++aiGD+a 
  MMETSP1325-20131115|1092_1  23 QN-SPRG-LVVDDRLRVKgidDSSVFAIGDCAV 53 
                 33.4788.*********5555**********96 PP

>> PF10803.3  Protein of unknown function (DUF2539)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.1e-05     0.075      13      29 ..      34      50 ..      30      55 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.1e-05
   PF10803.3 13 klriesvsnSSvlQIGs 29
                +lr+ ++  SSv+ IG 
  MMETSP1325-20131115|1092_1 34 RLRVKGIDDSSVFAIGD 50
                79*************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.63
# Mc/sec: 251.05
//
Query:       MMETSP1325-20131115|1093_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0059   15.5   4.2     0.0083   15.0   2.9    1.3  1  PF07466.6  Protein of unknown function (DUF1517)
  ------ inclusion threshold ------
      0.015   13.8   1.3      0.022   13.2   0.9    1.2  1  PF10267.4  Predicted transmembrane and coiled-coil 2 protein
        0.1   10.7   0.0       0.13   10.3   0.0    1.1  1  PF02696.9  Uncharacterized ACR, YdiU/UPF0061 family
          7    6.0   7.3         11    5.4   5.0    1.3  1  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF07466.6  Protein of unknown function (DUF1517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   2.9   2.4e-06    0.0083       1      60 [.      70     128 ..      70     183 .. 0.59

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.4e-06
   PF07466.6   1 aaasGGriGGg.sfr.ap.srssssprssspsgggygsssssygggysgggfgf.pflipi....fgf 60 
                 aa+sGGr GG+  fr ap +r + +pr        ++   + ygg +sggg+++ p++ p+    fg 
  MMETSP1325-20131115|1093_1  70 AARSGGRAGGSgGFRsAPpPRAAAAPRV------TNN---NYYGGRPSGGGVVIsPIISPFgyspFGY 128
                 599*******625663343333333333......222...2236667777777615555555433222 PP

>> PF10267.4  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.9   6.4e-06     0.022     192     241 ..     144     193 ..     135     195 .] 0.75

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 6.4e-06
   PF10267.4 192 snkggetgslagsaaaaqselslkklleeleeikeeqsrLeeslerLkeq 241
                 sn   +  +   +++   +e ++++l +elee k+ +s+Le++++rL++q
  MMETSP1325-20131115|1093_1 144 SNGADRQQQYRMENQLGAEEAKVQALEKELEESKALNSKLEDRMDRLEQQ 193
                 4443233333446777788999**************************97 PP

>> PF02696.9  Uncharacterized ACR, YdiU/UPF0061 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   3.9e-05      0.13     267     328 ..     126     185 ..     109     193 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 3.9e-05
   PF02696.9 267 ldyGPfafldk.yepsfianhddtakrysfanqPavilWnLqrlakdLssllasealneaLek 328
                 + y Pf+ l + y ++ ++n  d +++y+++nq       +q l+k+L     s+aln  Le+
  MMETSP1325-20131115|1093_1 126 FGYSPFGGLGTgYALGAMSNGADRQQQYRMENQLGAEEAKVQALEKELE---ESKALNSKLED 185
                 7899**999755********************************99987...57888877776 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   5.0    0.0033        11      23      52 ..     163     192 ..     148     195 .] 0.65

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0033
  PF04977.10  23 kqeiaalqaelaklkaeneeLeaevkdLks 52 
                 +++++al++el++ ka n +Le++ ++L++
  MMETSP1325-20131115|1093_1 163 EAKVQALEKELEESKALNSKLEDRMDRLEQ 192
                 566777777777777777777777777743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       964  (0.0705091); expected 273.4 (0.02)
Passed bias filter:                      619  (0.045275); expected 273.4 (0.02)
Passed Vit filter:                        89  (0.00650965); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.41s 00:00:00.97 Elapsed: 00:00:00.72
# Mc/sec: 649.01
//
Query:       MMETSP1325-20131115|1094_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-06   24.9   0.0      9e-06   24.9   0.0    1.1  1  PF00069.20 Protein kinase domain
     0.0096   14.9   0.0     0.0097   14.9   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.013   14.9   0.5      0.021   14.3   0.3    1.2  1  PF13833.1  EF-hand domain pair
       0.24   11.4   1.3       0.39   10.7   0.9    1.2  1  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   2.6e-09     9e-06     166     207 ..       2      53 ..       1      93 [. 0.71

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 2.6e-09
                 -HHHHH..........TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHH CS
  PF00069.20 166 APEvll..........kakeytkkvDvWslGvilyelltgklpfsgeseedq 207
                 APEv +          +   +t++ DvWslG +l+el++g+++f+++ ++d+
  MMETSP1325-20131115|1094_1   2 APEVARwaedrsavilEPLIATEALDVWSLGALLFELCNGRTLFRQDISNDD 53 
                 66664444444444447778899**********************9933333 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.8e-06    0.0097     181     218 ..      21      58 ..       2      87 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 2.8e-06
                 EEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH CS
  PF07714.12 181 kftsksDvWsfGvllwEiftlgespypglsneevlell 218
                   t++ DvWs G ll+E+++      +++sn +++++ 
  MMETSP1325-20131115|1094_1  21 IATEALDVWSLGALLFELCNGRTLFRQDISNDDLVDRS 58 
                 478899*************9777777888888887765 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.3   6.2e-06     0.021       2      39 ..      52      86 ..      47      86 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 6.2e-06
   PF13833.1  2 kGlItreeLkral.allglkglseeevdilfrefDtdgd 39
                ++l++r +L r +   +    +see+++++f+ +D d+d
  MMETSP1325-20131115|1094_1 52 DDLVDRSDLTRLYtWRT----ISEEQLTDVFKGADNDND 86
                78899999999774444....****************98 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.9   0.00011      0.39      10      54 ..      48      86 ..      42      87 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00011
   PF13499.1 10 DkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngd 54
                D ++d+ +d+ +L+rl +       +  ++e+l+++fk +D ++d
  MMETSP1325-20131115|1094_1 48 DISNDDLVDRSDLTRLYTW------RTISEEQLTDVFKGADNDND 86
                7899**************9......899***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 406.16
//
Query:       MMETSP1325-20131115|1095_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-34  116.7   0.1    7.8e-34  116.1   0.1    1.3  1  PF01764.20 Lipase (class 3)
     0.0042   16.7   0.1     0.0063   16.1   0.0    1.4  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.034   13.7   1.4       0.09   12.3   1.0    1.8  1  PF01083.17 Cutinase
      0.049   12.9   0.0      0.074   12.3   0.0    1.4  1  PF00756.15 Putative esterase
      0.064   13.0   0.1        0.1   12.3   0.1    1.3  1  PF12697.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.1   0.1   2.8e-37   7.8e-34       1     140 [.     100     238 ..     100     240 .. 0.94

  Alignments for each domain:
  == domain 1    score: 116.1 bits;  conditional E-value: 2.8e-37
                 EEEEE-E-SHHHHHHHHHHTECCCTTCGGS..TT-EEE---HHHHHHH.HHHHHHHHHHHHHHSTTSEEEEE-------HHHHHHHHHHHT-...TTTEEEEEES-S----HHHHHHHHH------EEEEEETTBSGGG-S-T CS
  PF01764.20   1 vvafRGtetaeewltdldislvevdellek..eggkvhkgfleayksa.reqvlkelkrllekypdykivvtGHSLGGalAlLaaadlaenglnksslvtvytfGqPrvgnkefaelveeklkkskvlrvvnenDivprlppa 140
                 v af+G+++ ++++ d++ + + +++++ +  + gkvh gf+  yks+ +  v+++l +l +++p+yk+++tGHSLG+a A+Laa+d+ +      s+  +yt+GqPrvg+++fa+ v+++  +   +rvv+++Di+ +lp +
  MMETSP1325-20131115|1095_1 100 VAAFKGSNETDDFIYDMQGGEFAFKDCKIGshNFGKVHDGFCGYYKSLhQAGVQTSLMELAAANPTYKVIITGHSLGAAAAVLAAVDYYQLTGG--SKAMLYTYGQPRVGDYDFAKTVNKHTDE--AYRVVHASDIIAHLPVC 238
                 579**********************9987799**************7615689*************************************7766..9**********************99999..**************976 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.3e-06    0.0063      37      79 ..     143     187 ..      77     247 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.3e-06
   PF12695.2  37 hgasegaaaakrvl..aadlldleriilvGhSlGGgvalelagrd 79 
                 + +s ++a +++ l   a+++ + ++i+ GhSlG+++a+++a ++
  MMETSP1325-20131115|1095_1 143 YYKSLHQAGVQTSLmeLAAANPTYKVIITGHSLGAAAAVLAAVDY 187
                 444444444444444423334567****************99855 PP

>> PF01083.17  Cutinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.0   3.3e-05      0.09      67     146 ..     152     230 ..     142     296 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.3e-05
                 HHHHHHHHHHH-TTSEEEE---B---HHHHHHHHH--S-HHHCTTEEEEEE--BTTT.TTT-T--TTTTGGGEEEEE-TT- CS
  PF01083.17  67 aarlvnsaaskCPntkivlgGYSqGaavmdnaiagkglsaavadkvkavvlfGdpsn.gqgltsvsklyaskikslCaagD 146
                 +++ + ++a+++P  k+++ G S Gaa++  a+    + + +  + +   ++G+p+     +++  +  ++++  + +a+D
  MMETSP1325-20131115|1095_1 152 VQTSLMELAAANPTYKVIITGHSLGAAAAVLAAVD--YYQLTGGSKAMLYTYGQPRVgDYDFAKTVNKHTDEAYRVVHASD 230
                 67788999*******************99988877..44444444344555666666333444444444555555555555 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.7e-05     0.074     106     138 ..     156     189 ..      78     197 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.7e-05
                 HHHHH-B----.EEEE--THHHHHHHHHHHH-TT CS
  PF00756.15 106 ldanfrtapdg.ravaGqSmGGlgALilalkhpd 138
                 l++    +p++   ++G+S+G+ +A+++a+++++
  MMETSP1325-20131115|1095_1 156 LMELAAANPTYkVIITGHSLGAAAAVLAAVDYYQ 189
                 444555666666699****************997 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.7e-05       0.1      63      87 ..     163     187 ..     142     229 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.7e-05
                 --.--EEEE--------HHHHHH-- CS
   PF12697.2  63 lglrpvvlvGHSlGgavalaaaarr 87 
                   + +v++ GHSlG+a+a +aa ++
  MMETSP1325-20131115|1095_1 163 NPTYKVIITGHSLGAAAAVLAAVDY 187
                 33348****************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.39s 00:00:01.03 Elapsed: 00:00:00.65
# Mc/sec: 1124.44
//
Query:       MMETSP1325-20131115|1097_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   12.5   0.8       0.06   12.4   0.6    1.0  1  PF12072.3 Domain of unknown function (DUF3552)
      0.061   12.4   0.8      0.064   12.4   0.6    1.0  1  PF07195.7 Flagellar hook-associated protein 2 C-terminus
      0.064   13.1   0.2      0.068   13.0   0.2    1.0  1  PF09403.5 Adhesion protein FadA
      0.069   12.8   0.2       0.07   12.8   0.2    1.1  1  PF04513.7 Baculovirus polyhedron envelope protein, PEP, C terminus
      0.078   13.1   0.2       0.09   12.9   0.1    1.2  1  PF08066.7 PMC2NT (NUC016) domain
      0.092   12.2   0.0        0.1   12.1   0.0    1.0  1  PF03997.7 VPS28 protein
       0.12   12.2   1.2       0.18   11.6   0.7    1.4  1  PF04899.7 MbeD/MobD like
       0.12   12.6   1.0       0.17   12.2   0.7    1.4  1  PF09278.6 MerR, DNA binding


Domain annotation for each model (and alignments):
>> PF12072.3  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.6   3.5e-05      0.06      75     120 ..       4      49 ..       2      60 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.5e-05
   PF12072.3  75 errkelqrqEkRllqkeetLdrkeeslekkeekleekekelkqkeq 120
                 +r ++l+++ ++l+ + + ++ + ++++++ +kl+e  + l++ ++
  MMETSP1325-20131115|1097_1   4 NRGQDLHHLSQKLIGRGDVIKDQRATVDQQTQKLSEMIQALNETTK 49 
                 5677788888888888888888888888888888888888876543 PP

>> PF07195.7  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.6   3.7e-05     0.064     189     231 ..      14      56 ..       6      60 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.7e-05
   PF07195.7 189 galqtkeenltkqikdldkkiedlnkrletleerlkaqfaale 231
                 ++l ++ + +++q +++d+++++l++ +++l+e  k+qf + +
  MMETSP1325-20131115|1097_1  14 QKLIGRGDVIKDQRATVDQQTQKLSEMIQALNETTKRQFDEQN 56 
                 567788899******************************9766 PP

>> PF09403.5  Adhesion protein FadA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2     4e-05     0.068      38      86 ..      11      59 ..       6      61 .] 0.90

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 4e-05
   PF09403.5 38 dLvkkeeaRfeeekeekeaaekevaklkelkaeleeklaklkeesktrf 86
                +L +k   R +  k+++ +++++ +kl e+ + l+e  ++  +e++ rf
  MMETSP1325-20131115|1097_1 11 HLSQKLIGRGDVIKDQRATVDQQTQKLSEMIQALNETTKRQFDEQNSRF 59
                5677777888999*********************************999 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   4.1e-05      0.07      56      93 ..      21      58 ..       4      61 .] 0.83

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.1e-05
   PF04513.7 56 sllaeldtrldtlltnLtdalnalqdtlrneLtnlnsi 93
                ++++++++ +d+++++L++ ++al++t + + +  ns 
  MMETSP1325-20131115|1097_1 21 DVIKDQRATVDQQTQKLSEMIQALNETTKRQFDEQNSR 58
                56788999********************9999988876 PP

>> PF08066.7  PMC2NT (NUC016) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   5.3e-05      0.09      49      89 ..      17      56 ..       3      58 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.3e-05
   PF08066.7 49 asksrikkrkdeesvedqwkavvdvlDsllEkvdtllDelk 89
                  ++++ k +   +v++q++++++++ +l E +  ++De +
  MMETSP1325-20131115|1097_1 17 IGRGDVIKDQ-RATVDQQTQKLSEMIQALNETTKRQFDEQN 56
                3344444444.6899***********************976 PP

>> PF03997.7  VPS28 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   5.8e-05       0.1      99     143 ..      11      53 ..       3      59 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.8e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXX CS
   PF03997.7  99 eivqnFitvlDalrLnirakDqlhPllseLleslnrlselpedfe 143
                 ++ q+ i   D ++ +  ++Dq   +lse++++ln++++    f+
  MMETSP1325-20131115|1097_1  11 HLSQKLIGRGDVIKDQRATVDQQTQKLSEMIQALNETTKRQ--FD 53 
                 5678899999****************************954..33 PP

>> PF04899.7  MbeD/MobD like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.7    0.0001      0.18      39      67 ..      22      50 ..      14      53 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.0001
   PF04899.7 39 ltqrenaaLseqvtgLsqQVesLseqvrR 67
                + + ++a   +q ++Ls  ++ L+e+++R
  MMETSP1325-20131115|1097_1 22 VIKDQRATVDQQTQKLSEMIQALNETTKR 50
                6678999********************99 PP

>> PF09278.6  MerR, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.7   9.9e-05      0.17      39      64 ..      21      46 ..       6      47 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 9.9e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF09278.6 39 allaeklaeleeqiaeLqalraeLea 64
                +++++++a +++q ++L+++ + L++
  MMETSP1325-20131115|1097_1 21 DVIKDQRATVDQQTQKLSEMIQALNE 46
                7899******************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1526  (0.111615); expected 273.4 (0.02)
Passed bias filter:                     1184  (0.0866004); expected 273.4 (0.02)
Passed Vit filter:                       132  (0.00965477); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.42u 0.46s 00:00:00.88 Elapsed: 00:00:00.61
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|1088_1  [L=461]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.7e-06   25.8   0.1    0.00037   20.4   0.0    2.2  2  PF05721.8 Phytanoyl-CoA dioxygenase (PhyH)


Domain annotation for each model (and alignments):
>> PF05721.8  Phytanoyl-CoA dioxygenase (PhyH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.0   0.0    0.0057        78       2      20 ..      77      95 ..      76     102 .. 0.84
   2 !   20.4   0.0   2.7e-08   0.00037     108     167 ..     190     246 ..     145     268 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.0057
                HH---EEE-----HHHHHH CS
   PF05721.8  2 eedGylviegflsaeevea 20
                ++ Gy+v+++++++e  e+
  MMETSP1325-20131115|1088_1 77 RQEGYVVVKNVVAEEDTET 95
                799**********987766 PP

  == domain 2    score: 20.4 bits;  conditional E-value: 2.7e-08
                 EEE-GGGTS-EE----EE-EEEESS-B-S----EEEE---------.............. CS
   PF05721.8 108 pwHqDstflptdpeesvvgvwialedateenGclrfiPGSHkweegplrrrlpeddteae 167
                  +H D+  ++  p+  +++ ++ l d+tee G+l+++P SH+   + ++  + +++++++
  MMETSP1325-20131115|1088_1 190 GLHLDQNPFS-KPQLDCIQGMVPLIDVTEEVGGLQVVPRSHTD--EAKAGFRERHPEMEG 246
                 5677776666.567899**************************..666777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.70
# Mc/sec: 1578.17
//
Query:       MMETSP1325-20131115|1096_1  [L=539]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.91u 0.35s 00:00:01.26 Elapsed: 00:00:00.64
# Mc/sec: 2018.18
//
Query:       MMETSP1325-20131115|1101_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.63
# Mc/sec: 505.90
//
Query:       MMETSP1325-20131115|1100_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.042   13.1   0.1      0.056   12.7   0.1    1.2  1  PF09986.4 Uncharacterized protein conserved in bacteria (DUF2225)


Domain annotation for each model (and alignments):
>> PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   4.1e-06     0.056      31      86 ..      64     122 ..      43     154 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.1e-06
   PF09986.4  31 dsdllakYkevnplfYevvvCpkCgYaale.kdFeklkkeekeklkekiskkwksr..d 86 
                 d d  +k   v+ +fY    C++Cg+ +l+ + F ++ k+  ++++   s+ ++ +  +
  MMETSP1325-20131115|1100_1  64 DLDEAQKEVAVDFYFYCFAFCKECGFDTLKtSTFLSIAKHTCNLIRVDASTDMNTAfeK 122
                 44555555668889************99873679***********99977776554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       545  (0.0398625); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.66
# Mc/sec: 925.87
//
Query:       MMETSP1325-20131115|1104_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      376  (0.0275015); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.61
# Mc/sec: 286.78
//
Query:       MMETSP1325-20131115|1103_1  [L=295]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-05   22.5   2.8     0.0045   16.7   0.1    2.9  3  PF13424.1  Tetratricopeptide repeat
     0.0027   17.1   6.1      0.011   15.2   0.1    2.8  2  PF13414.1  TPR repeat
     0.0031   17.7   5.2       0.69   10.3   0.1    3.9  3  PF13174.1  Tetratricopeptide repeat
     0.0083   16.5   5.7       0.98   10.1   0.1    4.0  3  PF13428.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.053   13.5   0.3       0.25   11.3   0.0    2.1  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      0.068   12.9   5.1       0.22   11.3   0.1    3.6  4  PF07719.12 Tetratricopeptide repeat
        2.7    7.6   6.2        2.7    7.6   0.1    3.0  4  PF00515.23 Tetratricopeptide repeat
        5.1    7.7   9.8       0.91   10.1   0.5    3.2  3  PF13432.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.2   2.8e-05     0.048      20      71 ..      31      79 ..      23      82 .. 0.78
   2 !   16.7   0.1   2.6e-06    0.0045       5      70 ..      54     117 ..      48     125 .. 0.85
   3 ?    3.3   0.9      0.04        69      11      35 ..      99     124 ..      89     172 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.8e-05
   PF13424.1 20 dydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylek 71
                ++ ++l+l e a +l +e g   + t  +l n++++++  gdy++A++ +e+
  MMETSP1325-20131115|1103_1 31 EWSSSLALWESAYKLGKERG---LVTPHTLQNYGTALAWEGDYEAAVAAFEQ 79
                56677777777777744444...66788999999999999999999999998 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 2.6e-06
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleyle 70 
                  ++l n++++l  +gdy+ A + +e+  +    elg +   + ++ + la  y+  g++d+A+ +l+
  MMETSP1325-20131115|1103_1  54 PHTLQNYGTALAWEGDYEAAVAAFEQFQAKpKDELGGT---IHNCELILALSYRLVGKLDSAIGLLN 117
                 58999*************************99999965...34677889999999999999987776 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.04
   PF13424.1  11 lalvlrrlgdydeAlelyekalel.l 35 
                 lal++r  g++d+A+ l++ ++e  l
  MMETSP1325-20131115|1103_1  99 LALSYRLVGKLDSAIGLLNGSIERmL 124
                 67778888888888877777776654 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   6.3e-06     0.011       4      66 ..      55     121 ..      52     123 .. 0.78
   2 ?    3.0   1.1      0.04        68      37      64 ..     146     171 ..     128     174 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 6.3e-06
   PF13414.1   4 ealkelGnalfkegdydeAieayekAleldpnn......aelyynlAlaylklgkdyeeAledyekAle 66 
                 ++l + G al +egdy+ A++a+e+  +  p++       ++ + lAl+y+  gk  ++A+  ++ ++e
  MMETSP1325-20131115|1103_1  55 HTLQNYGTALAWEGDYEAAVAAFEQFQAK-PKDelggtiHNCELILALSYRLVGK-LDSAIGLLNGSIE 121
                 67899********************9754.333122222669999*********5.7999988876665 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.04
   PF13414.1  37 aelyynlAlaylklgkdyeeAledyekA 64 
                 a +y++lAl+ +++  d  +A++   kA
  MMETSP1325-20131115|1103_1 146 ARAYAALALCRIHQ--DTAAAAKLMMKA 171
                 45999999999994..578888777776 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.1    0.0004      0.69       5      29 ..      59      83 ..      56      86 .. 0.82
   2 ?    3.5   0.0     0.059     1e+02       4      24 ..      97     117 ..      95     122 .. 0.86
   3 ?    2.8   0.9       0.1   1.7e+02       2      23 ..     148     168 ..     142     174 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0004
                HHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAlealerlike 29
                +++ ++   gd+++A++a+e++ ++
  MMETSP1325-20131115|1103_1 59 NYGTALAWEGDYEAAVAAFEQFQAK 83
                5677777767***********9765 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.059
                 HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyklgdtdeAleale 24 
                 + lalsy+  g+ d A+ +l+
  MMETSP1325-20131115|1103_1  97 LILALSYRLVGKLDSAIGLLN 117
                 679******77*****98875 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.1
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   2 AlyklalsyyklgdtdeAleal 23 
                 A+  lal+++ + dt++A +++
  MMETSP1325-20131115|1103_1 148 AYAALALCRIHQ-DTAAAAKLM 168
                 344466666666.*****9987 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.1   0.00057      0.98       3      33 ..      56      85 ..      54      90 .. 0.82
   2 ?    4.8   0.3     0.029        50       6      29 ..      98     121 ..      94     151 .. 0.87
   3 ?    0.7   0.9      0.61     1e+03       7      14 ..     145     152 ..     130     180 .. 0.56

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00057
   PF13428.1  3 allalarallalGdpdeAiallrralalaPd 33
                +l+ ++ al+  Gd+++A+a++++  ++ P+
  MMETSP1325-20131115|1103_1 56 TLQNYGTALAWEGDYEAAVAAFEQF-QAKPK 85
                67889******************98.44454 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.029
   PF13428.1   6 alarallalGdpdeAiallrrala 29 
                  la  ++  G +d Ai ll+  ++
  MMETSP1325-20131115|1103_1  98 ILALSYRLVGKLDSAIGLLNGSIE 121
                 689999999**********98876 PP

  == domain 3    score: 0.7 bits;  conditional E-value: 0.61
   PF13428.1   7 larallal 14 
                 lara++al
  MMETSP1325-20131115|1103_1 145 LARAYAAL 152
                 34444333 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00015      0.25      28      82 ..      57     117 ..      29     119 .. 0.79
   2 ?   -0.7   0.1      0.85   1.4e+03      27      39 ..     148     160 ..     119     181 .. 0.55

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00015
                 HHHHHHHHHH---HHHHHHHHHC......TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHH CS
   PF12895.2  28 lyalAlclylngeykrAyellrk......leldssslgcryllArcllklgkydeAiavLe 82 
                 l +++ +l   g+y++A+ ++++       el  +   c ++lA ++   gk+d Ai +L+
  MMETSP1325-20131115|1103_1  57 LQNYGTALAWEGDYEAAVAAFEQfqakpkDELGGTIHNCELILALSYRLVGKLDSAIGLLN 117
                 455699999999*****99999999988777777666899999*************99997 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.85
                 CHHHHHHHHHH-- CS
   PF12895.2  27 ylyalAlclylng 39 
                 ++ alAlc  ++ 
  MMETSP1325-20131115|1103_1 148 AYAALALCRIHQD 160
                 3332455544444 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       4.4   7.6e+03       3      11 ..       7      15 ..       6      22 .. 0.71
   2 ?   11.3   0.1   0.00013      0.22       3      26 ..      56      79 ..      54      82 .. 0.91
   3 ?    1.3   0.0      0.21   3.6e+02       7      24 ..      99     116 ..      97     122 .. 0.86
   4 ?   -0.9   0.1       1.1   1.9e+03       6      15 ..     146     155 ..     142     170 .. 0.64

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 4.4
                HHHHHHHHH CS
  PF07719.12  3 alynlGlay 11
                ++++l+ a 
  MMETSP1325-20131115|1103_1  7 GWFRLASAV 15
                699999775 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00013
                HHHHHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12  3 alynlGlayyklgdyeeAleafek 26
                 l n G a++  gdye A++afe+
  MMETSP1325-20131115|1103_1 56 TLQNYGTALAWEGDYEAAVAAFEQ 79
                67899*****************98 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.21
                 HHHHHHHTT-HHHHHHHH CS
  PF07719.12   7 lGlayyklgdyeeAleaf 24 
                 l+l+y+  g+++ A+ ++
  MMETSP1325-20131115|1103_1  99 LALSYRLVGKLDSAIGLL 116
                 899***********9766 PP

  == domain 4    score: -0.9 bits;  conditional E-value: 1.1
                 HHHHHHHHTT CS
  PF07719.12   6 nlGlayyklg 15 
                 ++++a+++l 
  MMETSP1325-20131115|1103_1 146 ARAYAALALC 155
                 3444444333 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       4.9   8.4e+03       3      12 ..       7      16 ..       6      21 .. 0.71
   2 ?    7.6   0.1    0.0016       2.7       8      26 ..      61      79 ..      57      79 .. 0.92
   3 ?    2.1   0.0     0.088   1.5e+02       7      21 ..      99     113 ..      97     116 .. 0.93
   4 ?   -2.5   0.1       2.4   4.2e+03       1      10 [.     146     155 ..     146     159 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 4.9
                HHHHHHHHHH CS
  PF00515.23  3 alynlGnayl 12
                 +++l+ a +
  MMETSP1325-20131115|1103_1  7 GWFRLASAVM 16
                5999998755 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0016
                HHHHHHTT-HHHHHHHHHH CS
  PF00515.23  8 GnaylklgkydeAleyyek 26
                G a+   g+y+ A++++e+
  MMETSP1325-20131115|1103_1 61 GTALAWEGDYEAAVAAFEQ 79
                7899999**********96 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.088
                 HHHHHHHTT-HHHHH CS
  PF00515.23   7 lGnaylklgkydeAl 21 
                 l++ y+  gk+d A+
  MMETSP1325-20131115|1103_1  99 LALSYRLVGKLDSAI 113
                 899**********98 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 2.4
                 HHHHHHHHHH CS
  PF00515.23   1 akalynlGna 10 
                 a+a+  l+++
  MMETSP1325-20131115|1103_1 146 ARAYAALALC 155
                 6788888887 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.6   0.00084       1.4      31      63 ..      54      85 ..      24      87 .. 0.61
   2 ?   10.1   0.5   0.00053      0.91      10      54 ..      67     116 ..      59     126 .. 0.71
   3 ?   -0.5   2.2       1.2     2e+03      30      51 ..     145     165 ..      99     173 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00084
   PF13432.1 31 aeallllaeallrlgrldeAaallraalalaPd 63
                +  l++++ al+  g++++A+a+++++ ++ P+
  MMETSP1325-20131115|1103_1 54 PHTLQNYGTALAWEGDYEAAVAAFEQF-QAKPK 85
                556666666666666666666666666.55555 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00053
   PF13432.1  10 aGdydeAlaaleaalalaPe.....aaeallllaeallrlgrldeAaall 54 
                  Gdy++A+aa+e++ a++ +       +  l la ++   g+ld A+ ll
  MMETSP1325-20131115|1103_1  67 EGDYEAAVAAFEQFQAKPKDelggtIHNCELILALSYRLVGKLDSAIGLL 116
                 69************999944344555566666666666666666666555 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 1.2
   PF13432.1  30 aaeallllaeallrlgrldeAa 51 
                  a+a+ +la +  ++ + ++Aa
  MMETSP1325-20131115|1103_1 145 LARAYAALALCRIHQ-DTAAAA 165
                 566666666666666.555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:01.11
# Mc/sec: 636.87
//
Query:       MMETSP1325-20131115|1107_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-05   23.4   0.0    5.5e-05   23.2   0.0    1.1  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0     4e-09   5.5e-05       3      49 ..      36      84 ..      34      85 .] 0.94

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 4e-09
                BEEEEEEEE...TSSSCEEEEEEEEET.TEEEEESSSSTTCECSECEEEEC CS
  PF00169.24  3 keGyllkks...ellktwkkryfvLts.nyLlyfksskkksykapkgsipl 49
                +eG++ kk    ++ +tw +ryf   + ++L+y+k++++  + +p+g+++l
  MMETSP1325-20131115|1107_1 36 REGWMEKKApkrKSTQTWARRYFLIAEpGVLEYYKKDDT--SGEPQGVVDL 84
                89********9999************99**********6..******9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 415.69
//
Query:       MMETSP1325-20131115|1109_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-07   31.1   0.4    1.4e-07   31.1   0.3    1.1  1  PF01699.19 Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.3     1e-11   1.4e-07      48      84 ..       4      40 ..       1      51 [. 0.87

  Alignments for each domain:
  == domain 1    score: 31.1 bits;  conditional E-value: 1e-11
  PF01699.19 48 aalkgagdlalgsivGSalfnlllviglcvlisplge 84
                a+  +++d ++g+++GS+ +n++l+igl++ ++++++
  MMETSP1325-20131115|1109_1  4 AVSDDNADASIGNVTGSNGVNVFLGIGLPWAMAAFYW 40
                45556***************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|1099_1  [L=371]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   14.9   0.0      0.017   14.3   0.0    1.2  1  PF13168.1 Poxvirus B22R protein C-terminal


Domain annotation for each model (and alignments):
>> PF13168.1  Poxvirus B22R protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.2e-06     0.017     139     188 ..     183     232 ..     165     240 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-06
   PF13168.1 139 kvaCpiGtLRlleldisayatlkeeeedgvkvykvtrlaallskepvvtl 188
                   +Cp G+LR+ e ++ + + +k  ++  v    + +la ll + p ++l
  MMETSP1325-20131115|1099_1 183 DFICPSGQLRVSEQELANVVETKGVRTIAVARLFIAHLARLLGHDPSISL 232
                 579*******************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.37s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 1891.59
//
Query:       MMETSP1325-20131115|1112_1  [L=265]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-37  126.7   0.1    3.5e-36  123.4   0.0    2.0  1  PF01641.13 SelR domain
  ------ inclusion threshold ------
      0.078   12.7   2.1       0.96    9.2   0.2    2.7  3  PF13824.1  Zinc-finger of mitochondrial splicing suppressor 51
       0.14   11.7   1.1        1.2    8.8   0.0    2.2  2  PF10058.4  Predicted integral membrane metal-binding protein (DUF2296)
       0.45   10.2   3.4        4.8    6.9   0.2    2.3  2  PF12773.2  Double zinc ribbon


Domain annotation for each model (and alignments):
>> PF01641.13  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.4   0.0     1e-39   3.5e-36       4     123 ..     113     244 ..     110     245 .. 0.83

  Alignments for each domain:
  == domain 1    score: 123.4 bits;  conditional E-value: 1e-39
                 HHCCCHCCHHHHHHH----STT-ST.............TTS--.----EEETT---EEE-CCCS--S-----EES--STTTSEEEEEEE----EEEEEEETTC-TT---EE-.------.--EEE--TTTEEE-- CS
  PF01641.13   4 lkkkLseeqykvlrekatekpftge.............ykkkk.eeGiyvcivcgeplfkskdkfdsgcGWPsFsepiseeaikekedeslgmkRvevrcakcdahLGhvfk.dGpkektgeRyCinsaslkfvk 123
                 + ++L+++q++vlr+k+te p+ +e             y +k+ ++G y c++cgepl+ + +kf sgcGWP+F+++i+  a++e  d++   +Rve+ c+kc++hLGhvfk +G+ ++t+ R+C+n++s+++ +
  MMETSP1325-20131115|1112_1 113 WLSVLTPMQHEVLRNKGTEAPGFSEktpgeleyelkkrYRSKYpSQGAYACAGCGEPLYYAATKFGSGCGWPAFFDSIPG-AVTEVPDKD--GRRVEIVCTKCGGHLGHVFKgEGFPTPTNARHCVNGVSIQYDP 244
                 8899***************986432122222211111133333368********************************98.9*******9..9**************************************9875 PP

>> PF13824.1  Zinc-finger of mitochondrial splicing suppressor 51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.2   0.00028      0.96       9      30 ..     155     176 ..     127     181 .. 0.84
   2 ?   -1.5   0.0      0.61   2.1e+03      19      25 ..     180     186 ..     178     189 .. 0.81
   3 ?    1.8   0.0     0.058     2e+02      11      21 ..     203     213 ..     196     216 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00028
   PF13824.1   9 qparvefeCpdCGiptycseeh 30 
                  p + ++ C  CG p y+ +++
  MMETSP1325-20131115|1112_1 155 YPSQGAYACAGCGEPLYYAATK 176
                 388999***********98766 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.61
   PF13824.1  19 dCGipty 25 
                  CG+p +
  MMETSP1325-20131115|1112_1 180 GCGWPAF 186
                 6****87 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.058
   PF13824.1  11 arvefeCpdCG 21 
                  rve+ C +CG
  MMETSP1325-20131115|1112_1 203 RRVEIVCTKCG 213
                 589*******9 PP

>> PF10058.4  Predicted integral membrane metal-binding protein (DUF2296)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1     0.072   2.5e+02      39      52 ..     155     168 ..     150     169 .. 0.75
   2 ?    8.8   0.0   0.00034       1.2      18      42 ..     202     226 ..     194     236 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.072
   PF10058.4  39 eleevtyrCphCga 52 
                  +++  y C+ Cg+
  MMETSP1325-20131115|1112_1 155 YPSQGAYACAGCGE 168
                 556668******96 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00034
   PF10058.4  18 enryalICskChshnGlapkeelee 42 
                   r+ ++C+kC  h G + k e  +
  MMETSP1325-20131115|1112_1 202 GRRVEIVCTKCGGHLGHVFKGEGFP 226
                 56899**********9987666555 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2    0.0014       4.8      27      50 .]     158     182 ..     146     182 .. 0.81
   2 ?    5.7   2.4    0.0033        11       1      37 [.     163     214 ..     158     236 .. 0.69

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0014
   PF12773.2  27 aeevlCpsCges.vspkarfCpnCG 50 
                 + +++C  Cge+   + ++f   CG
  MMETSP1325-20131115|1112_1 158 QGAYACAGCGEPlYYAATKFGSGCG 182
                 4568899999998889999999998 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0033
   PF12773.2   1 CpqCgae.npsgarfCpqCgaklk..............eataeevlCpsCge 37 
                 C+ Cg++   +  +f + Cg +                  ++ e++C +Cg 
  MMETSP1325-20131115|1112_1 163 CAGCGEPlYYAATKFGSGCGWPAFfdsipgavtevpdkDGRRVEIVCTKCGG 214
                 5556666333445666666666668888888888888855555788999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1322.99
//
Query:       MMETSP1325-20131115|1113_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   27.8   0.0    2.7e-06   26.6   0.0    1.6  1  PF02845.11 CUE domain
     0.0073   16.2   3.7     0.0073   16.2   2.5    2.4  2  PF04695.8  Peroxisomal membrane anchor protein (Pex14p) conserved region
     0.0091   16.2   2.6        2.1    8.6   1.4    2.5  2  PF00428.14 60s Acidic ribosomal protein
  ------ inclusion threshold ------
      0.014   15.0   0.1      0.023   14.3   0.1    1.4  1  PF00627.26 UBA/TS-N domain
      0.027   14.2   0.0      0.041   13.6   0.0    1.2  1  PF03474.9  DMRTA motif


Domain annotation for each model (and alignments):
>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   9.9e-10   2.7e-06       3      39 ..       2      38 ..       1      39 [. 0.93

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 9.9e-10
                HHHHHHHHHSTTS-HHHHHHHHHHSTTTHHHHHHHHH CS
  PF02845.11  3 qmletLkemFPdldeevIravLrasngnvEaainaLL 39
                +++++L  mF ++d+e+++ vL + +g+vEaa++  L
  MMETSP1325-20131115|1113_1  2 SDVDQLAMMFSEWDRETLELVLASAGGDVEAAVDTVL 38
                7899*****************************9655 PP

>> PF04695.8  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   2.5   2.7e-06    0.0073      62     125 ..      42     108 ..      19     113 .. 0.67
   2 ?   -4.1   8.4         5   1.4e+04      83     104 ..     143     164 ..     133     260 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 2.7e-06
   PF04695.8  62 aqstsesstpsdnysnqsssssststpqsqqsyyqqppplvper....dwrdllimataaaglgygly 125
                 + +++ +++ +++++ q+++++++s p++qq  ++ ppp++ ++    + ++ ++m+ta  g++ g+ 
  MMETSP1325-20131115|1113_1  42 SPQDYRNQQAQQQQQAQQAPPPNPSPPSYQQPAATPPPPPM-QQgprgTNNQQMVMVTAPPGSAPGAV 108
                 44555556666666666666667777777777777666665.44477799999999999999888876 PP

  == domain 2    score: -4.1 bits;  conditional E-value: 5
   PF04695.8  83 sststpqsqqsyyqqppplvpe 104
                 + +++++++q++ qq+pp++p+
  MMETSP1325-20131115|1113_1 143 PGAQQQYPPQQQQQQQPPPPPQ 164
                 2333333333333333433322 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0063        17       4      66 ..      16      75 ..      13      84 .. 0.70
   2 !    8.6   1.4   0.00078       2.1      47      64 ..     237     259 ..     205     264 .. 0.53

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0063
  PF00428.14  4 aadikavlkaagveveaerlkllvkalegkdikeliangsaklaaaaaaaaaaaaaaaaaaaa 66
                 ++++ vl++ag +vea ++++++++ + +d ++  a+ +++++   a +   ++++ +++aa
  MMETSP1325-20131115|1113_1 16 RETLELVLASAGGDVEA-AVDTVLAFESPQDYRNQQAQQQQQAQ--QAPPPNPSPPSYQQPAA 75
                578999*******9986.69999999999999999998888855..33333333333333332 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00078
  PF00428.14  47 a.....aaaaaaaaaaaaaaaaa 64 
                       a a+aa a+aaa+aaaa
  MMETSP1325-20131115|1113_1 237 EhaynqARAGAAGAGAAAGAAAA 259
                 03343222222222222222222 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   8.5e-06     0.023       5      35 ..       3      35 ..       1      37 [. 0.91

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 8.5e-06
                HHHHHHH-.-.--HHHHHHHHHHTTTSHHHHHH CS
  PF00627.26  5 aiqqLreM.G.fsreeakkALratnnnvErAve 35
                ++ qL  M   ++re+    L +++++vE+Av+
  MMETSP1325-20131115|1113_1  3 DVDQLAMMfSeWDRETLELVLASAGGDVEAAVD 35
                78899999977*********************8 PP

>> PF03474.9  DMRTA motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.5e-05     0.041       5      38 ..       4      37 ..       2      38 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.5e-05
   PF03474.9  5 idvLakiFPnrkrsvLElvlkrCkGDvvrAiEll 38
                +d La  F +  r++LElvl   +GDv  A+  +
  MMETSP1325-20131115|1113_1  4 VDQLAMMFSEWDRETLELVLASAGGDVEAAVDTV 37
                5779999********************8887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       622  (0.0454944); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.73u 0.36s 00:00:01.08 Elapsed: 00:00:00.77
# Mc/sec: 852.73
//
Query:       MMETSP1325-20131115|1110_1  [L=686]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-46  153.3   0.0    8.6e-21   73.2   0.0    3.3  3  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    2.2e-31  107.5   0.0    1.2e-14   53.9   0.0    3.4  3  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    7.8e-28   95.9   0.0    4.5e-10   39.1   0.0    3.5  3  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   0.0   1.9e-24   8.6e-21       1      70 []     231     301 ..     231     301 .. 0.99
   2 !   53.6   0.0   2.5e-18   1.1e-14       1      70 []     429     500 ..     429     500 .. 0.98
   3 !   23.0   0.0   8.9e-09     4e-05      12      69 ..     610     666 ..     609     667 .. 0.94

  Alignments for each domain:
  == domain 1    score: 73.2 bits;  conditional E-value: 1.9e-24
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBEE CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseedaekAlealngkklggrelk 70 
                 ++Vg L++d+te++++ +F+ fG i++++++++ +tg+skgf+f+e+  +e ae+Al+a+ng +l gr +k
  MMETSP1325-20131115|1110_1 231 IYVGSLHYDLTEKDIRGVFEAFGTITDVTMSHEpSTGKSKGFCFIEYGAPEHAEAALQAMNGFELAGRSIK 301
                 8*******************************************************************986 PP

  == domain 2    score: 53.6 bits;  conditional E-value: 2.5e-18
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES..TTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBEE CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrd..etgrskgfafVeFeseedaekAlealngkklggrelk 70 
                 +++g+++ ++t + +k +F +fG i +++l ++    ++++g++f+++e++ +ae+A+++++g +l gr+lk
  MMETSP1325-20131115|1110_1 429 IYIGGVSAELTCDTVKAVFDPFGTISEVRLLPEpgLPEKHRGYGFIQYETHKAAEDAVAQMDGFELLGRKLK 500
                 8********************************************************************986 PP

  == domain 3    score: 23.0 bits;  conditional E-value: 8.9e-09
                 HHHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17  12 eeeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklggrel 69 
                 e e++e + k+G++e++k+++    + +   fV F ++ +a++A +al+g+ +gg+++
  MMETSP1325-20131115|1110_1 610 ETEIREEMIKYGSVERVKIYP-VVAQDQVRIFVLFYDKASAQRAQSALQGRYFGGHVI 666
                 6789999**************.69999999*************************997 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.0   2.7e-18   1.2e-14       1      69 []     231     301 ..     231     301 .. 0.98
   2 !   38.0   0.0   2.4e-13   1.1e-09       1      69 []     429     500 ..     429     500 .. 0.94
   3 !   11.8   0.0   3.6e-05      0.16      12      68 ..     610     666 ..     609     667 .. 0.87

  Alignments for each domain:
  == domain 1    score: 53.9 bits;  conditional E-value: 2.7e-18
   PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkalkkln.lvlkgrtir 69 
                 +yv+ l+++ te d+r  f+ +g++++v + +++  g+++gf+f+e++ +e+A++al+++n   l gr i+
  MMETSP1325-20131115|1110_1 231 IYVGSLHYDLTEKDIRGVFEAFGTITDVTMSHEPStGKSKGFCFIEYGAPEHAEAALQAMNgFELAGRSIK 301
                 89*********************************9************************99******996 PP

  == domain 2    score: 38.0 bits;  conditional E-value: 2.4e-13
   PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnk.d.grgrgfAfvefeseedAqkalkkln.lvlkgrtir 69 
                 +y++g++ + t + +++ f p+g++++vr+ +++    + rg++f+++e++++A+ a+++++   l gr+++
  MMETSP1325-20131115|1110_1 429 IYIGGVSAELTCDTVKAVFDPFGTISEVRLLPEPgLpEKHRGYGFIQYETHKAAEDAVAQMDgFELLGRKLK 500
                 8******************************987466689*********************99*99999986 PP

  == domain 3    score: 11.8 bits;  conditional E-value: 3.6e-05
   PF14259.1  12 eedlreffspygkvegvriprnkdgrgrgfAfvefeseedAqkalkkln.lvlkgrti 68 
                 e+++re + +yg+ve+v+i +    ++    fv f ++++Aq+a  +l+   ++g+ i
  MMETSP1325-20131115|1110_1 610 ETEIREEMIKYGSVERVKIYPVV-AQDQVRIFVLFYDKASAQRAQSALQgRYFGGHVI 666
                 5799****************632.245788*****************99899999987 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.0     6e-12   2.7e-08       4      53 ..     248     302 ..     245     303 .. 0.96
   2 !   39.1   0.0   9.8e-14   4.5e-10       3      56 .]     445     504 ..     443     504 .. 0.96
   3 !   19.6   0.0   1.2e-07   0.00054       2      51 ..     614     666 ..     613     669 .. 0.91

  Alignments for each domain:
  == domain 1    score: 33.3 bits;  conditional E-value: 6e-12
   PF13893.1   4 lfskfGkverikifrkk.....ggqAfvefdtveaArkakeylngvklygktLkv 53 
                  f+ fG+++++++ ++      +g++f+e+  +e A+ a++++ng  l g+++kv
  MMETSP1325-20131115|1110_1 248 VFEAFGTITDVTMSHEPstgksKGFCFIEYGAPEHAEAALQAMNGFELAGRSIKV 302
                 5999***********99***999******************************98 PP

  == domain 2    score: 39.1 bits;  conditional E-value: 9.8e-14
   PF13893.1   3 klfskfGkverikifrkk......ggqAfvefdtveaArkakeylngvklygktLkveys 56 
                 + f +fG++ +++++++       +g++f++++t++aA+ a+++++g  l g++Lkv+++
  MMETSP1325-20131115|1110_1 445 AVFDPFGTISEVRLLPEPglpekhRGYGFIQYETHKAAEDAVAQMDGFELLGRKLKVNWA 504
                 6789************99****999**********************************8 PP

  == domain 3    score: 19.6 bits;  conditional E-value: 1.2e-07
   PF13893.1   2 yklfskfGkverikifrkk...ggqAfvefdtveaArkakeylngvklygktL 51 
                 ++   k+G ver+ki +     + + fv f ++++A++a ++l+g++++g+ +
  MMETSP1325-20131115|1110_1 614 REEMIKYGSVERVKIYPVVaqdQVRIFVLFYDKASAQRAQSALQGRYFGGHVI 666
                 566789*********99669999***************************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.96u 0.38s 00:00:01.34 Elapsed: 00:00:00.94
# Mc/sec: 1748.83
//
Query:       MMETSP1325-20131115|1114_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   14.6   0.4         11    6.3   0.0    2.7  3  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0   0.00083        11       2      20 ..      11      30 ..      10      32 .. 0.85
   2 ?    6.2   0.0    0.0009        12       2      22 .]      34      55 ..      33      55 .. 0.88
   3 ?   -3.3   0.0         1   1.4e+04       2       6 ..      57      61 ..      57      61 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00083
                ESEEEETSS.BCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppsls 20
                +++LdL  + +l+ ++ + l+
  MMETSP1325-20131115|1114_1 11 ITKLDLTMCqKLEgDIES-LK 30
                789*********999988.65 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0009
                ESEEEETSS.BCB.CHHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsnL 22
                L++ dL ++ +l+ +++  + n+
  MMETSP1325-20131115|1114_1 34 LTSCDLYCCeKLSgNIQA-FANM 55
                7888*********99999.8875 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 1
                ESEEE CS
  PF00560.28  2 LeeLd 6 
                Le+L+
  MMETSP1325-20131115|1114_1 57 LEVLN 61
                78887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.64
# Mc/sec: 232.15
//
Query:       MMETSP1325-20131115|1118_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        71  (0.0051931); expected 273.4 (0.02)
Passed bias filter:                       63  (0.00460796); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.60
# Mc/sec: 211.68
//
Query:       MMETSP1325-20131115|1115_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 678.97
//
Query:       MMETSP1325-20131115|1121_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.31s 00:00:00.75 Elapsed: 00:00:00.72
# Mc/sec: 539.18
//
Query:       MMETSP1325-20131115|1119_1  [L=387]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-52  179.6  10.0    7.7e-45  153.7   0.1    2.2  2  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.7   0.1   5.6e-49   7.7e-45       1     160 [.      58     249 ..      58     261 .. 0.92
   2 !   28.0   4.6   8.7e-11   1.2e-06     255     382 ..     253     384 ..     245     385 .. 0.71

  Alignments for each domain:
  == domain 1    score: 153.7 bits;  conditional E-value: 5.6e-49
                 HHHHHHHHHHHHHHH...--..-----HHHHHHHHHHTT-TT..--HHHHHHHHHHHHHHHHHHHC----CHHC-HHHHHHHHHHHHHHHHHHHHHHHH----SHHHHHHHHHHHHHHHHHHHHG............................S.HHHHHHHHHHHHHHHHHHH-----XXXXXXXXXXXXXXXX CS
  PF04652.11   1 kaitpylkrAqelek...ad..pvvaYycrlyavqlilkikl..kdkeatkfltkLlDklEalKkelgdndavtdeeaaqayvenFAlklFnradkqdragkankataktFyaAstffellkifge...........................l.deevkqkiKyAkwkaariakalkegedpnpgppideeeee 160
                 k+i+pyl rA+el++   ++  +vvaYycr +a+q +lk +   +++e+t fl+ L+  lEa K+ l+d+  +     ++  v++F+l +F+rad++dra+ a+k tak Fy A++ff+ lk+fg+                           l ++e+++k+ yAkwka++i k++keg++ +pg p++e  ++
  MMETSP1325-20131115|1119_1  58 KPIKPYLTRAEELDRdqtREdtKVVAYYCRQFAMQEGLKLRGsdSSQEVTDFLMGLMTVLEAEKEALKDSPLL---HQGKETVTQFGLDVFQRADNEDRAELADKGTAKVFYVAANFFDTLKQFGDigrqrdfdcthghakalathaitptxlLeEPEIEAKKTYAKWKATEILKCIKEGRPIVPGGPGEEPGAA 249
                 89***********8522233469****************99889************************85555...678999******************************************99999******************9999964799*******************************9998766 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 8.7e-11
                 XXXXXXXX.............................................................XXXXXXXXXXXHHHHHH.............HHHHHHHHHHHHHHHHHHHHHHHTTTXHHHHHHHHHHHHHHH CS
  PF04652.11 255 dsqlPsaPty.........aqknssssqsvfPpsseeeetssssppsteapssppvqapsapakpslssakPtaqsassaqaqplqsvapqi....aageitlddeaiakaqKhaKwAiSALnFeDvetAvkeLrkALklL 382
                 d   PsaP+           ++  ++ ++ +P      +  +++pps++ ps+p++     p+++   +++P+a+++++a+ ++    a+++    a++    ++e+ia+a  +aK+Ai AL +  v+  +++L++AL+++
  MMETSP1325-20131115|1119_1 253 DFGIPSAPSGatgggdlnlPSIGGPAGTPPAPAFGG-ASGGPAAPPSYPGPSQPAA-----PPSY---QPAPAAPRYPAAANTSAGFGASHQyvppAPNTGPATQEQIADAIELAKFAIRALEHKQVPVGIEKLQQALQTI 384
                 555566665555555555444446666666666655.5566666888888888886.....3334...567777777777666555555555778889999*************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.35s 00:00:01.04 Elapsed: 00:00:00.99
# Mc/sec: 936.76
//
Query:       MMETSP1325-20131115|1122_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.60
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|1102_1  [L=768]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0057   15.6   2.8      0.011   14.7   2.0    1.4  1  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
       0.48    9.9   2.8       0.24   10.9   0.3    1.7  2  PF04810.10 Sec23/Sec24 zinc finger


Domain annotation for each model (and alignments):
>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   2.0   1.6e-06     0.011       3      25 ..      25      47 ..      24      50 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.6e-06
  PF00641.13  3 gdWdCskClvqNfawstkCvaCq 25
                ++W+C+ C ++N++  ++C++C+
  MMETSP1325-20131115|1102_1 25 EQWECNLCRFKNSPFMPVCEICS 47
                69********************6 PP

>> PF04810.10  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   3.5e-05      0.24      23      35 ..      25      37 ..      21      41 .. 0.87
   2 ?   -3.4   0.1         1   6.9e+03      26      33 ..      42      49 ..      42      52 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.5e-05
  PF04810.10 23 krWtCnlCgtrNe 35
                 +W CnlC+++N 
  MMETSP1325-20131115|1102_1 25 EQWECNLCRFKNS 37
                68********995 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 1
  PF04810.10 26 tCnlCgtr 33
                +C +C+ +
  MMETSP1325-20131115|1102_1 42 VCEICSLK 49
                59999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (768 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.13u 0.39s 00:00:01.52 Elapsed: 00:00:01.09
# Mc/sec: 1688.44
//
Query:       MMETSP1325-20131115|1123_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   21.9   9.6    0.00012   21.9   6.7    3.2  3  PF07974.8  EGF-like domain
     0.0051   16.7   5.5     0.0051   16.7   3.8    2.1  2  PF01683.13 EB module
  ------ inclusion threshold ------
      0.035   14.0   1.7      0.035   14.0   1.1    2.9  3  PF12661.2  Human growth factor-like EGF
       0.11   11.9   1.4       0.18   11.2   0.9    1.3  1  PF06821.8  Serine hydrolase


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   6.7   3.6e-08   0.00012       1      32 []      19      47 ..      19      47 .. 0.93
   2 ?   -3.6   4.9       3.6   1.2e+04       9      21 ..     180     188 ..     180     196 .. 0.88
   3 ?   -2.1   1.1       1.2   4.1e+03      11      17 ..     193     199 ..     188     210 .. 0.44

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 3.6e-08
   PF07974.8  1 CsadgliCgghGtCvkqcgkCvCdsgyqGktC 32
                C++d ++C+ +G C    g+C+C   ++G+ C
  MMETSP1325-20131115|1123_1 19 CETD-SDCSLNGVCS--AGVCECRTAWTGDRC 47
                9886.46********..*************** PP

  == domain 2    score: -3.6 bits;  conditional E-value: 3.6
   PF07974.8   9 gghGtCvkqcgkC 21 
                 ++hG C+  c  C
  MMETSP1325-20131115|1123_1 180 SQHGDCE--C--C 188
                 589***9..9..8 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 1.2
   PF07974.8  11 hGtCvkq 17 
                 +G C+ +
  MMETSP1325-20131115|1123_1 193 GGLCDGS 199
                 3333333 PP

>> PF01683.13  EB module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   3.8   1.5e-06    0.0051      21      44 ..      18      41 ..      14      50 .. 0.89
   2 ?   -4.1   1.7         4   1.4e+04      37      41 ..     183     187 ..     181     208 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 1.5e-06
  PF01683.13 21 aCevgeqCqggsvCsagtCqCpeg 44
                +Ce++  C+ + vCsag+C+C++ 
  MMETSP1325-20131115|1123_1 18 PCETDSDCSLNGVCSAGVCECRTA 41
                7********************975 PP

  == domain 2    score: -4.1 bits;  conditional E-value: 4
  PF01683.13  37 gtCqC 41 
                 g C+C
  MMETSP1325-20131115|1123_1 183 GDCEC 187
                 55666 PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.1     1e-05     0.035       1      13 []      35      47 ..      35      47 .. 0.96
   2 ?   -1.8   0.0       1.1   3.9e+03       6      11 ..      59      64 ..      58      65 .. 0.79
   3 ?   -3.1   0.8         3     1e+04       2       4 ..     185     187 ..     184     187 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1e-05
   PF12661.2  1 kCqCppGyTGdnC 13
                +C+C   +TGd+C
  MMETSP1325-20131115|1123_1 35 VCECRTAWTGDRC 47
                6************ PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.1
   PF12661.2  6 pGyTGd 11
                +Gy G+
  MMETSP1325-20131115|1123_1 59 SGYRGT 64
                7**997 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 3
   PF12661.2   2 CqC 4  
                 C+C
  MMETSP1325-20131115|1123_1 185 CEC 187
                 999 PP

>> PF06821.8  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.9   5.2e-05      0.18       6      63 ..      60     117 ..      57     138 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.2e-05
                 -----TTSTTHHHHHHHHHH--EEEEE--TS--HHHHHHHHHGGGGG--TTEEEEEE- CS
   PF06821.8   6 GlkgsgpeHWqswlekklpaarrveqadweqPdledWvaeleaavaaaeekvvlvAHS 63 
                 G++g +++H  s +  ++ +    + + w +   e+W  +l a +a  ++++vl +HS
  MMETSP1325-20131115|1123_1  60 GYRGTDDGHNTSSWGGAVLQGADGKYHMWASEMTEHWYXALLARAASPPTSCVLTCHS 117
                 9********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.82
# Mc/sec: 663.38
//
Query:       MMETSP1325-20131115|1124_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.2    7.7   8.5        2.8    7.4   5.9    1.3  1  PF12071.3 Protein of unknown function (DUF3551)


Domain annotation for each model (and alignments):
>> PF12071.3  Protein of unknown function (DUF3551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.9    0.0002       2.8       6      38 ..      12      44 ..       2      50 .] 0.68

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0002
   PF12071.3  6 laalalllaaaallaaatpaeArdypyClqggg 38
                +aa+a+++aaaa +aaa++a+A d + C +++ 
  MMETSP1325-20131115|1124_1 12 FAAAAAAAAAAASAAAAAAAAADDSAACSHSDS 44
                444455467777777777777888889987544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1015  (0.0742393); expected 273.4 (0.02)
Passed bias filter:                      509  (0.0372294); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.70
# Mc/sec: 171.17
//
Query:       MMETSP1325-20131115|1126_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-05   20.3  15.7    0.00011   20.0  10.9    1.0  1  PF01576.14 Myosin tail
      0.001   18.8  13.0     0.0015   18.3   9.0    1.3  1  PF11559.3  Afadin- and alpha -actinin-Binding
     0.0018   17.8  15.6      0.002   17.6  10.8    1.1  1  PF04156.9  IncA protein
     0.0059   16.0   5.0     0.0059   16.0   3.5    1.5  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
     0.0087   14.1  10.8     0.0094   14.0   7.5    1.0  1  PF06160.7  Septation ring formation regulator, EzrA
  ------ inclusion threshold ------
      0.012   15.2   8.3      0.012   15.2   5.7    3.1  3  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.013   15.6  11.1      0.024   14.8   7.7    1.5  1  PF08232.7  Striatin family
      0.022   13.7  16.2      0.032   13.2  11.2    1.2  1  PF00261.15 Tropomyosin
      0.024   14.4  10.2       0.03   14.1   7.0    1.2  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein
      0.047   13.3   3.6      0.039   13.6   1.6    1.5  2  PF07889.7  Protein of unknown function (DUF1664)
      0.056   12.9  17.1      0.072   12.5  11.9    1.1  1  PF00769.14 Ezrin/radixin/moesin family
      0.099   12.3  16.3      0.063   12.9   5.1    2.3  2  PF12718.2  Tropomyosin like
       0.11   10.2   8.1       0.12   10.1   5.6    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
       0.13   11.8  15.0       0.41   10.2   1.8    2.2  2  PF12325.3  TATA element modulatory factor 1 TATA binding
       0.13   11.0   9.7       0.15   10.8   6.7    1.0  1  PF04111.7  Autophagy protein Apg6
       0.17   10.2   5.3       0.19    9.9   3.6    1.0  1  PF13166.1  AAA domain
       0.17   11.5   3.6       0.22   11.2   2.5    1.3  1  PF12614.3  Ribosome recycling factor
       0.18   10.9  12.5       0.25   10.4   3.0    2.0  2  PF11932.3  Protein of unknown function (DUF3450)
       0.19   10.8  12.7       0.24   10.4   8.8    1.1  1  PF13851.1  Growth-arrest specific micro-tubule binding
       0.23    9.8  12.5        1.4    7.2   8.7    1.8  1  PF03148.9  Tektin family
       0.27   11.2   1.9       0.35   10.9   1.3    1.1  1  PF01201.17 Ribosomal protein S8e
       0.29   11.0  14.3       0.37   10.6   9.9    1.1  1  PF06818.10 Fez1
       0.34    9.9  12.2       0.38    9.7   8.5    1.0  1  PF10234.4  Clusterin-associated protein-1
       0.41   10.6   6.6       0.51   10.3   4.6    1.1  1  PF08702.5  Fibrinogen alpha/beta chain family
       0.45    9.2   4.3       0.49    9.1   3.0    1.1  1  PF12805.2  FUSC-like inner membrane protein yccS
       0.48    8.7  10.4       0.57    8.4   7.2    1.1  1  PF05667.6  Protein of unknown function (DUF812)
       0.48   10.0  13.1        1.2    8.7   3.5    2.2  2  PF07926.7  TPR/MLP1/MLP2-like protein
       0.56   10.5   3.9        1.6    9.0   2.7    1.8  1  PF09177.6  Syntaxin 6, N-terminal
       0.81    9.3  13.5        1.8    8.2   9.4    1.5  1  PF08614.6  Autophagy protein 16 (ATG16)
       0.81    9.5   8.4        1.8    8.4   0.6    2.8  3  PF00170.16 bZIP transcription factor
       0.95    9.7  10.4        7.5    6.8   7.2    2.1  1  PF06156.8  Protein of unknown function (DUF972)
          1    8.6   7.3        2.2    7.5   1.5    2.0  2  PF04799.8  fzo-like conserved region
        1.1    8.6  14.0          5    6.5   2.4    2.7  2  PF04977.10 Septum formation initiator
        1.3    9.3   9.6        0.9    9.8   2.1    2.4  2  PF04102.7  SlyX
        1.4    8.1  16.1         10    5.2  11.2    2.0  1  PF04012.7  PspA/IM30 family
        1.4    8.7  17.5        0.9    9.3   3.7    2.2  1  PF13863.1  Domain of unknown function (DUF4200)
        1.4    8.0   9.3        1.9    7.6   6.5    1.3  1  PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
        1.8    7.0  10.3        2.1    6.8   7.1    1.0  1  PF10498.4  Intra-flagellar transport protein 57
        2.2    8.2   8.2        0.7    9.8   0.5    2.2  2  PF11690.3  Protein of unknown function (DUF3287)
        2.4    6.3   9.4        2.8    6.1   6.5    1.0  1  PF10359.4  RNA pol II promoter Fmp27 protein domain
        3.3    7.3  10.5       0.47   10.1   1.6    2.1  2  PF04859.7  Plant protein of unknown function (DUF641)
        3.5    7.5  11.5        2.9    7.8   2.9    2.1  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        3.5    6.5   7.3        2.2    7.2   3.9    1.6  2  PF07246.6  Phlebovirus nonstructural protein NS-M
        3.7    7.0  14.2        5.8    6.4   9.4    1.5  2  PF03962.10 Mnd1 family
        6.4    6.2  10.4        9.2    5.7   7.2    1.3  1  PF05266.9  Protein of unknown function (DUF724)
        8.1    6.1  11.5         36    4.0   8.0    1.8  1  PF14235.1  Domain of unknown function (DUF4337)
        8.2    6.7  15.0        4.3    7.6   2.9    2.2  2  PF05178.7  KRI1-like family
        9.7    5.8  16.7        1.2    8.8   3.4    2.8  2  PF01920.15 Prefoldin subunit


Domain annotation for each model (and alignments):
>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0  10.9   3.8e-07   0.00011     614     713 ..       6     105 ..       2     109 .. 0.92

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 3.8e-07
  PF01576.14 614 leaEleelrsaleqaerarkaaEaeleeaservneltaqnssliaeKrkLEaelaalqsdldEaanelkaaeerakkaqadaarlaeeLrqEqensqkle 713
                 l++ +++ ++  e ae   ++  +e++ ++ ++++l+ qn  + + Kr+LE ++ +l++ l E + e + a e  k++ +   +  eeL++ +    k+e
  MMETSP1325-20131115|1126_1   6 LRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGKAE 105
                 667777778888999999999999*******************************************************************999888877 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   9.0   5.1e-06    0.0015      44     127 ..       7      90 ..       3     107 .. 0.82

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 5.1e-06
   PF11559.3  44 lqqrdrdleqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkniiqsi 127
                  qq ++     e  e+ +r++  ei+ +  +i++l+ q+ + +    +l++k r+le+kl +l+  + + +eel+rl+ +  + 
  MMETSP1325-20131115|1126_1   7 RQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQA 90 
                 34444444455666777899*********************************************************9775554 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6  10.8   7.1e-06     0.002      70     166 ..       6      93 ..       1     107 [. 0.78

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 7.1e-06
   PF04156.9  70 edekieesrlqeelsesesqlsele.eeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr.....eeisdlkeevqelrse 166
                  ++++++    e+++e  ++l ++  ee+ ++  +++ l++++++++e + +l+   ++le++l +l+++++++++e+++lr     +            ++e
  MMETSP1325-20131115|1126_1   6 LRQQVQQ---RETITERAETLVRQKgEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRvkkvqA------------EEE 93 
                 3344444...6799999999999999********************************************************422221............222 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   3.5   2.1e-05    0.0059      70     138 ..      27      93 ..      18     107 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.1e-05
   PF07106.8  70 sdeelnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkea 138
                 + ee++ + a+i++l+ +++e+ + +++le + ++L+++l   el +e +   +e+++ + k  + +e+
  MMETSP1325-20131115|1126_1  27 KGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKL--GELTDEHERASEELKRLRVKKVQAEEE 93 
                 6789999999999999999999999999999999999999..888888888888888776554444443 PP

>> PF06160.7  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   7.5   3.3e-05    0.0094     330     425 ..       8     103 ..       1     107 [. 0.93

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 3.3e-05
   PF06160.7 330 erlkqsYtLnekelekvrelekqleelekqleeleekiaekkaaYSelqeeleeiekqleeiekeqeelseelqsLrkeekeAreklkelkkklse 425
                 ++++q+ t++e     vr+  +++ ++ +q+++l+ + +e +    +l+ +++++e +l e+ +e+e+ seel++Lr +  +A+e+l++ k +l +
  MMETSP1325-20131115|1126_1   8 QQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGK 103
                 7899999*********************************99999*******************************************99998865 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.3      0.31        87      36      64 ..       4      32 ..       1      36 [. 0.64
   2 ?   15.2   5.7   4.2e-05     0.012       3      73 ..      20      90 ..      18      91 .. 0.85
   3 ?    4.9   1.6     0.069        20      32      61 ..      77     106 ..      75     109 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.31
   PF12329.3 36 kkLrkknkelekeieelkkkleklekele 64
                 +Lr+++++ e+  e+++  + ++ +e++
  MMETSP1325-20131115|1126_1  4 SSLRQQVQQRETITERAETLVRQKGEEIA 32
                56777777777766666666666666665 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 4.2e-05
   PF12329.3  3 lekklkeKdeqIaqLmeEgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerlkra 73
                +e+++++K e+Ia+    +++Ls ++ + ++  ++L  k+++le+++ el+++ e+ ++el +l+ ++ +a
  MMETSP1325-20131115|1126_1 20 AETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQA 90
                57889999999999999999999999999999999999999999999999999999999999998766555 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.069
   PF12329.3  32 nntikkLrkknkelekeieelkkkleklek 61 
                 ++++k Lr k  ++e+e+ ++k  l k e+
  MMETSP1325-20131115|1126_1  77 SEELKRLRVKKVQAEEELHKTKHDLGKAEE 106
                 789999****99999999999988888776 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   7.7   8.3e-05     0.024      28     100 ..      32     104 ..       7     110 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 8.3e-05
   PF08232.7  28 aEmkarIakLeGerrglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaeeeeleekkdee 100
                 a m a+I +L G++r++++ k++L  +v+ Le++l + + ++++++++ ++ + ++ ++++e ++++++  ++
  MMETSP1325-20131115|1126_1  32 AAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGKA 104
                 6699************************************999988888777666666666666555555444 PP

>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2  11.2   0.00011     0.032     127     219 ..       8     100 ..       2     108 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 0.00011
  PF00261.15 127 kdLeraeeraeaaeskiaeLeeelkvvgnnlksLevseekaseredkyeekiklLtekLkeaetRaeeAErsvqkLekevdrledeleaekek 219
                 + +++ e+  e+ae+ +++  ee+  +++++k+L  ++ +  e + + e k+++L++kL e     e A  + ++L  +  + e+el ++k+ 
  MMETSP1325-20131115|1126_1   8 QQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHD 100
                 667777888999*****************************************************************999999****999975 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   7.0    0.0001      0.03       8     111 ..       2     107 ..       1     111 [] 0.80

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 0.0001
                 HHHHHHHH-HHHHHHGGGGS-.-TTT---HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHH.HH----HHHHHHHHHHHHHHHHH CS
   PF07200.8   8 eLkeLlqdedkleefvkeldq.vqdlneekeellaqnesLaeenlekepqleelkaqlqdkle....elkkleekyeekkqkldel.sskyspealkelLqaaakkadee 111
                 eL++L q+ ++ e + ++ +  v++  ee+ ++ aq+++L+ +n     ++ e k+ql+ k+     +l +l +++e+ +++l++l  +k++ e  +++ ++ + ka+e 
  MMETSP1325-20131115|1126_1   2 ELSSLRQQVQQRETITERAETlVRQKGEEIAAMAAQIKQLSGQN----REVREGKRQLEFKVRdleaKLGELTDEHERASEELKRLrVKKVQAEEELHKTKHDLGKAEER 107
                 8899999999999998888885777788999*************....88888888877665500015667888999999999999889999999999999999999986 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2    0.0026      0.74      66     125 ..       6      65 ..       2      65 .. 0.90
   2 ?   13.6   1.6   0.00014     0.039      44     109 ..      33      98 ..      22     107 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0026
   PF07889.7  66 LsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLeskleslesk 125
                 L q++++ ++  ++ + ++++  ee++ +  ++++++ + +++++  ++Le k++ le+k
  MMETSP1325-20131115|1126_1   6 LRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAK 65 
                 6678888888888899999999***********************************986 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 0.00014
   PF07889.7  44 AvasvtkqlekvseavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslk 109
                 A+a   kql   + +v + k++L  ++  l+ kl e ++  ++ +ee++++r +  + +e++++ k
  MMETSP1325-20131115|1126_1  33 AMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTK 98 
                 455556778888899*************************************99999999887765 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5  11.9   0.00025     0.072      37     126 ..       9     101 ..       2     109 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00025
  PF00769.14  37 eleeklkqeeeeaqklekkakeleeekerLee...eaaksekekeeLekevdeaeaevakleeerekkeaeteqlqkelreareaeeeakeel 126
                 + +++   +e+++ +  +k +e++++ +++++   ++++  + k++Le +v+++ea+  +l++e e+  +e ++l+ +  +a e+ +++k+ l
  MMETSP1325-20131115|1126_1   9 QVQQRETITERAETLVRQKGEEIAAMAAQIKQlsgQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDL 101
                 5566667788888888999998888888777622255556677999**********************9999999988888888888887765 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   1.9      0.27        76      37      78 ..       3      41 ..       1      60 [. 0.48
   2 ?   12.9   5.1   0.00022     0.063      15      63 ..      58     106 ..      52     109 .. 0.92

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.27
   PF12718.2 37 iksLqkKnqqlEeevekleeqlkeakekleekekkkteaeal 78
                ++sL +++qq E+  e++e+ +++  e+  + + + ++   l
  MMETSP1325-20131115|1126_1  3 LSSLRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQ---L 41
                55666666666666666655554433333333322222...2 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 0.00022
   PF12718.2  15 kaeeleeklKeleqenekkEeeiksLqkKnqqlEeevekleeqlkeake 63 
                 k+ +le+kl el +e e++ ee+k L  K+ q+Eee+ k++ +l +a+e
  MMETSP1325-20131115|1126_1  58 KVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGKAEE 106
                 7889**************************************9998876 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   5.6   0.00041      0.12      39     133 ..       2      93 ..       1     109 [. 0.74

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00041
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXX.....XXXXX CS
  PF01496.14  39 klrkleseikkakielkdekekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenk....veelrelssldeefk 133
                 +l++l++++++ ++ ++   e    ++ +e++ +++++++l  + +ev+e +++Le ++++le +  +l+ e+e  +e+     v      ++++ e++
  MMETSP1325-20131115|1126_1   2 ELSSLRQQVQQRETITE-RAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELkrlrV------KKVQAEEE 93 
                 57888899988887777.445555555569****************************************999999996334442......33333222 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.8    0.0014      0.41      10      52 ..       8      50 ..       2      51 .. 0.87
   2 ?    7.3   3.2     0.011       3.2      19      60 ..      59     100 ..      52     110 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0014
   PF12325.3 10 ssagpnvqlveklsstirrlEgElaslkeelarLekerdeare 52
                ++ +++ +++e+ ++ +r++  E+a++  ++++L+ + +e+re
  MMETSP1325-20131115|1126_1  8 QQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVRE 50
                5566777899*************************99998875 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.011
   PF12325.3  19 veklsstirrlEgElaslkeelarLekerdeareEivkltee 60 
                 v  l++++  l  E     eel+rL  ++ +a+eE+ k   +
  MMETSP1325-20131115|1126_1  59 VRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHD 100
                 344555555566666666666666666666666665554443 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   6.7   0.00053      0.15      63     142 ..      17     101 ..       2     108 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00053
                 ......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  63 e.....nvealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklkklelekelkslelql 142
                        v +  +e+  ++ ++++l  + +e+++ + +l+ +++ l+++  +l +e+e+  +el+++++kk++ e+el+  + +l
  MMETSP1325-20131115|1126_1  17 TeraetLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDL 101
                 1333234566778888999999999999999999999999999999999999999999999999999999999999988777665 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.6   0.00068      0.19     325     424 ..       4     103 ..       1     108 [. 0.79

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00068
   PF13166.1 325 eelkaelealeeeleklekaleeKlkdpfs.slelesiadeieeinelvdkinelirkhNekidnlkeeknkakkklwlhlvaelkedideyekklkklek 424
                 ++l++++++ e++ e+ e  + +K +++     ++++++ +  e+ e   +++ ++r+   k  +l++e ++a ++l++  v++++++ +e++k +++l k
  MMETSP1325-20131115|1126_1   4 SSLRQQVQQRETITERAETLVRQKGEEIAAmAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAE-EELHKTKHDLGK 103
                 6788888888888888889999999888886677888888888899999999999999999999999999999999999999888877.667766666554 PP

>> PF12614.3  Ribosome recycling factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   2.5   0.00078      0.22      40     100 ..      25      87 ..       3     106 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00078
   PF12614.3  40 rsRnwqltgeasklqsfleelkte..eeeelrylikkiekallkhsdklepledklarLieen 100
                 r +  ++++ a ++++++ + +     +++l++ ++ +e++l + +d  e+ +++l+rL  ++
  MMETSP1325-20131115|1126_1  25 RQKGEEIAAMAAQIKQLSGQNREVreGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKK 87 
                 5556677788888888887777654477899***************************95443 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.0   0.00088      0.25      58     104 ..       2      48 ..       1      50 [. 0.94
   2 ?    4.9   1.9     0.042        12      38      91 ..      52     105 ..      44     109 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00088
   PF11932.3  58 eieqlqeevenlkvyndqleklvenqqqelaslqeqieeieetrqei 104
                 e+ +l+++v++ ++ +++ e lv+++ +e+a+++ qi++++  ++e+
  MMETSP1325-20131115|1126_1   2 ELSSLRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREV 48 
                 67899***********************************9999886 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.042
   PF11932.3  38 aaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslq 91 
                 ++q   k+ +l+++  el  e e+++ee++ l+v + q e+++++ +  l + +
  MMETSP1325-20131115|1126_1  52 KRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGKAE 105
                 5566778999999999**************************999998887766 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   8.8   0.00085      0.24      31     127 ..       5     105 ..       2     109 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00085
   PF13851.1  31 slkeeiaelkkkeekneklmaeikkenkrlkepLkkae...eeveeLkkklkqyekd.kqsLknlkaklkelekelknlkwesevleqrfekverErdely 127
                 sl+++++++++  e+ e l+ +  +e+  + +++k++    +ev+e k++l++  +d  ++L +l+ + ++  +elk+l+ ++ + e+ ++k + +  + +
  MMETSP1325-20131115|1126_1   5 SLRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSgqnREVREGKRQLEFKVRDlEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGKAE 105
                 78888888888888888888888888888888777765111445555667777766634568888888888888888888888888888888777766555 PP

>> PF03148.9  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   8.7    0.0051       1.4       8      94 ..       9     101 ..       5     107 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0051
   PF03148.9   8 qytqaeaqrdkaerlreesrrlvneteak......tkktqadvtkkLeeRikdiefwkseLereleelkeEieaLeeekrrlekalealelpl 94 
                 q++q e+ +++ae+l+++  + ++ + a+       +++ ++ +++Le ++ d+e    eL++e+e+++eE + L   k ++e++l +++  l
  MMETSP1325-20131115|1126_1   9 QVQQRETITERAETLVRQKGEEIAAMAAQikqlsgQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDL 101
                 555555555555555544444444333330000113456778899******************************************999766 PP

>> PF01201.17  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.3    0.0012      0.35      33      97 ..      33      98 ..       4     100 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.0012
                XXXXEES.HHH.CCCCCC..T----EEEECCCC-EEEEEETTTTEEEEEEEEEESSSSSTCHHHCTT CS
  PF01201.17 33 aaetklgkvlskrvkqvr..vrggnrkvralrlkkanvthpeekvtrklrIidVkknpssneyvrtg 97
                a+ ++++ +ls + ++vr   r  + kvr l +k +++t+ +e ++++l+ ++Vkk ++++e+ +t+
  MMETSP1325-20131115|1126_1 33 AMAAQIK-QLSGQNREVRegKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTK 98
                2233333.233333333333344456888******************************99999886 PP

>> PF06818.10  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   9.9    0.0013      0.37      11     105 ..       2     103 ..       1     110 [. 0.77

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.0013
  PF06818.10  11 eisLLkqqLke..sqae.....laqkaseilsLraqlrearaelqeseeklqelkdalrtktleLevceneLqrkkseaellrekagrleaelaelrealas 105
                 e+s L+qq+++  + +e     + qk  ei ++ aq+++  ++ +e  e  ++l+  +r  +++L    +e +r  +e + lr k  + e+el++ ++ l +
  MMETSP1325-20131115|1126_1   2 ELSSLRQQVQQreTITEraetlVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGK 103
                 788888887541132222224478999999999999999999999999999999988888888888888999999999999999999999999988877665 PP

>> PF10234.4  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   8.5    0.0013      0.38     117     213 ..       4     101 ..       1     106 [. 0.87

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0013
   PF10234.4 117 sdlkaarqlaseitekgakLydlLekeldlkesrqkals.rplelaevekalkeaikelaeelqklkaelenlksdeanLeekiekkkqelertqkrL 213
                 s l++  q  ++ite++ +L+ + ++e     ++ k+ls ++ e+ e ++ l   +++l+++l +l++e e+++++ ++L  k  + ++el +t++ L
  MMETSP1325-20131115|1126_1   4 SSLRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSgQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDL 101
                 667788888899***************9766666555553899**************************************************99877 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.6    0.0018      0.51      37     132 ..       2      92 ..       1      96 [. 0.88

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0018
                 HHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  37 kieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLqevlrsneskiqrLeqdiaqker 132
                 ++++l+++++q +  t+ +e lv++  e+++   +q k+ +    +v +  +++    le k+   e+++ +L++ ++  +++++rL+++ +q+e+
  MMETSP1325-20131115|1126_1   2 ELSSLRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREG-KRQ----LEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEE 92 
                 5789***************************9999999887776677666.555....58899999***********************9988775 PP

>> PF12805.2  FUSC-like inner membrane protein yccS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.0    0.0017      0.49     196     270 ..       4      83 ..       1      95 [. 0.77

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0017
   PF12805.2 196 eelreafe.hsdvlfrfqrllelqaeaceelaeailrrkpyq.....hserleraleeleqsleklaqqenpesqellkaL 270
                 ++lr++++ ++++ +r + l+++ +e++ ++a +i++ +  +      +++le+  ++le++l +l ++ +++  e+lk+L
  MMETSP1325-20131115|1126_1   4 SSLRQQVQqRETITERAETLVRQKGEEIAAMAAQIKQLSGQNrevreGKRQLEFKVRDLEAKLGELTDE-HERASEELKRL 83 
                 57899999799999*********************8633322345566677888888888888886666.55666666666 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   7.2     0.002      0.57     333     405 ..       6      86 ..       1     107 [. 0.48

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.002
   PF05667.6 333 lqeqide.......lessieeveeeikalkskikeveeeleevkeeneeleeev.kikkrtvelledaeenvakLqalvea 405
                 l++q+++       +e+ +++  eei+a++++ik++  ++ ev+e + +le +v ++  ++ el ++ e+  ++L++l ++
  MMETSP1325-20131115|1126_1   6 LRQQVQQretiterAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVrDLEAKLGELTDEHERASEELKRLRVK 86 
                 444443311111113344455555666666666666666666666666666554235555555555555555555555433 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.5    0.0043       1.2      60     119 ..       2      71 ..       1      74 [. 0.90
   2 ?    6.5   1.2      0.02       5.7       3      36 ..      71     104 ..      69     109 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0043
   PF07926.7  60 eLtklkkelaelqkeaselrkeadsakael..........neleekweeeksmLevelselekkieelne 119
                 eL++l++++++ ++  +  ++++ ++ +e+          + ++++  e k++Le ++++le k+ el+ 
  MMETSP1325-20131115|1126_1   2 ELSSLRQQVQQRETITERAETLVRQKGEEIaamaaqikqlSGQNREVREGKRQLEFKVRDLEAKLGELTD 71 
                 79999999999999999999999999999999999999889999999999***************99986 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.02
   PF07926.7   3 aeisslkeelkrlesqiaaieeqiqklkdDlenq 36 
                 +e + + eelkrl+ ++ ++ee++ k+k Dl + 
  MMETSP1325-20131115|1126_1  71 DEHERASEELKRLRVKKVQAEEELHKTKHDLGKA 104
                 5666677777777777777777777777777655 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.7    0.0056       1.6      18      76 ..      29      87 ..       2      98 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0056
   PF09177.6 18 eslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpekfglse 76
                e++     ++++ s +++e+ e +++Le +++++e +l +L ++ + ++++ ++ ++++
  MMETSP1325-20131115|1126_1 29 EEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKK 87
                333334444555555889***********************999988888877766555 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   9.4    0.0063       1.8      55     140 ..      17     102 ..       1     107 [. 0.60

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0063
   PF08614.6  55 ssstsasgsgsdaaiaeleqklaklreelaelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelk 140
                    + +   ++   ia++++++ +l   + e  + + +l+ ++ +l+ +l e+  e  + ++el++l+ +  + eee+++ ++ l 
  MMETSP1325-20131115|1126_1  17 TERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDLG 102
                 22222223334556677777777777777777777777777777777777777777777777777777777777777777777665 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       8.8   2.5e+03      48      58 ..       2      12 ..       1      18 [. 0.66
   2 ?    8.4   0.6    0.0065       1.8      23      60 ..      26      63 ..      20      65 .. 0.86
   3 ?    5.0   2.3     0.073        21      30      62 ..      54      86 ..      49      97 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 8.8
                ..HHHHHHHHH CS
  PF00170.16 48 eleelkkevak 58
                el++l+++v++
  MMETSP1325-20131115|1126_1  2 ELSSLRQQVQQ 12
                56677777775 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0065
                HHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHH CS
  PF00170.16 23 RKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                 K +ei+  +  +k+L+++N++ ++   +l+ +v  l+
  MMETSP1325-20131115|1126_1 26 QKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLE 63
                58899*****************9998888887776665 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.073
                HHHHHHHHHHHHH.......HHHHHHHHHHHHH CS
  PF00170.16 30 eLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                +Le kv  Lea+  +L +e e+ ++e ++l+ +
  MMETSP1325-20131115|1126_1 54 QLEFKVRDLEAKLGELTDEHERASEELKRLRVK 86
                677777777777777777777777777777655 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   7.2     0.026       7.5      16      68 ..      30      82 ..       1     110 [. 0.60

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.026
   PF06156.8 16 qleelleeleelkkelkelleenaelkleneklrerleeleeeekkkekkkkk 68
                ++ ++ +++++l  +  e+ e   +l+ +++ l+ +l el++e+++++++ k 
  MMETSP1325-20131115|1126_1 30 EIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKR 82
                56666666666666666666666666666666666666665522222222111 PP

>> PF04799.8  fzo-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.4     0.079        23     128     158 ..       2      33 ..       1      42 [. 0.69
   2 ?    7.5   1.5    0.0078       2.2     115     164 ..      45      98 ..      34     104 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.079
   PF04799.8 128 eikelekeiekletiqskakll.rnkanlles 158
                 e+++l +++++ eti+++a +l r+k++ ++ 
  MMETSP1325-20131115|1126_1   2 ELSSLRQQVQQRETITERAETLvRQKGEEIAA 33 
                 56778888888888888876544777777654 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0078
   PF04799.8 115 eqqvdvtkkdleeeikelekeiekl....etiqskakllrnkanlleseLekFe 164
                 +++v + k++le ++++le+++ +l    e  ++++k+lr k  + e+eL+k +
  MMETSP1325-20131115|1126_1  45 NREVREGKRQLEFKVRDLEAKLGELtdehERASEELKRLRVKKVQAEEELHKTK 98 
                 467888899999999999999988754446788899***********9998755 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   3.8     0.025       7.2      17      56 ..       7      46 ..       2      63 .. 0.53
   2 ?    6.5   2.4     0.018         5      20      53 ..      53      86 ..      50     107 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.025
  PF04977.10 17 lalyqlkqeiaalqaelaklk.aeneeLeaevkdLksdedy 56
                ++  q+++ i++  ++l+++k +e+++++a++k+L+ ++++
  MMETSP1325-20131115|1126_1  7 RQQVQQRETITERAETLVRQKgEEIAAMAAQIKQLS-GQNR 46
                555566666665555555554355666666666663.3332 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.018
  PF04977.10 20 yqlkqeiaalqaelaklkaeneeLeaevkdLksd 53
                +ql+ ++ +l+a+l +l +e e+  +e+k+L+  
  MMETSP1325-20131115|1126_1 53 RQLEFKVRDLEAKLGELTDEHERASEELKRLRVK 86
                57788999**********************9754 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.1    0.0032       0.9      15      54 ..      11      51 ..       2      56 .. 0.78
   2 ?    3.4   0.6      0.31        89      11      40 ..      57      86 ..      53     108 .. 0.43

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0032
   PF04102.7 15 fqedtieeLNevvaeqq.keidrlqrqlrllaerlkelees 54
                 q +ti e  e++++q+ +ei+++++q+++l+ + +e++e 
  MMETSP1325-20131115|1126_1 11 QQRETITERAETLVRQKgEEIAAMAAQIKQLSGQNREVREG 51
                56677777777777776489*****************9954 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.31
   PF04102.7 11 iklafqedtieeLNevvaeqqkeidrlqrq 40
                +k+   e  + eL ++  +  +e++rl+ +
  MMETSP1325-20131115|1126_1 57 FKVRDLEAKLGELTDEHERASEELKRLRVK 86
                333333333333333333333333333333 PP

>> PF04012.7  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  11.2     0.036        10      72     173 ..      10      86 ..       1     107 [. 0.46

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.036
   PF04012.7  72 kkAkaALtkgeeeLArealaeikslekqaealetqlaqqrsaveqlrkqlealetkieelkakkellkarekaakaqeavqkslgklstesatdslerieeK 173
                 ++ ++  t+ +e L r   +ei+ ++ q+++l+ q  ++r+   ql+ ++++le+k+ el ++                          e a+++l+r++ K
  MMETSP1325-20131115|1126_1  10 VQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDE-------------------------HERASEELKRLRVK 86 
                 222334444455555555555555555555555555555555555555555555555555444.........................44444444444322 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.7    0.0032       0.9      55     107 ..      10      62 ..       2      64 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0032
   PF13863.1  55 lkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekleekleey 107
                 +++ e  +erae  ++++ +e   + ++ik+l+ q  e ++ +++le k++++
  MMETSP1325-20131115|1126_1  10 VQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDL 62 
                 67777778999999999999999999999999999999999999999999876 PP

>> PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.5    0.0066       1.9     192     262 ..      14      89 ..       3     106 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0066
   PF05278.7 192 vvEKevkerdvllkkqE...mekqekelaekEKeikevre....kvtemaaklgelemkrarlekrlaflssKvekfk 262
                 ++  e+ e  v+ k +E   m +q k+l  +++e++e ++    kv +++aklgel  +  r  ++l+ l+ K  k++
  MMETSP1325-20131115|1126_1  14 ETITERAETLVRQKGEEiaaMAAQIKQLSGQNREVREGKRqlefKVRDLEAKLGELTDEHERASEELKRLRVK--KVQ 89 
                 4456889999999999933345567788889999999887344467899**************9988877655..444 PP

>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   7.1    0.0073       2.1     243     339 ..       3     103 ..       1     107 [. 0.75

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0073
   PF10498.4 243 Lkklsqdlska...lekiekrEkqlnnqleelvqeykeareelsevqekynqlsksvsektaelseiseeleqvkqelee.rgsklsdgsplvkikqaitk 339
                 L++l+q++++     e+ e++ +q  +++  + ++ k+ + +  ev+e   ql+ +v +++a+l e+++e e   +el++ r +k++ ++ l+k k+++ k
  MMETSP1325-20131115|1126_1   3 LSSLRQQVQQRetiTERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRlRVKKVQAEEELHKTKHDLGK 103
                 67777777643000333344444445567777788999999999999999999999999*************99999997688999999999999988765 PP

>> PF11690.3  Protein of unknown function (DUF3287)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.5    0.0025       0.7      33      78 ..      25      68 ..       3      70 .. 0.74
   2 ?    3.3   0.9      0.25        72      49      79 ..      69      97 ..      66     108 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0025
   PF11690.3 33 hlsskekkeaedfidkveskhrklreerrrLlkkrqdlrierkmrr 78
                +   +e +++ + i+++ ++ r+ re +r+L+ k  dl  e k+ +
  MMETSP1325-20131115|1126_1 25 RQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDL--EAKLGE 68
                44555666677778999999999999999999999999..877765 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.25
   PF11690.3 49 veskhrklreerrrLlkkrqdlrierkmrrl 79
                + + h + +ee++rL+ k+ +   e ++++ 
  MMETSP1325-20131115|1126_1 69 LTDEHERASEELKRLRVKKVQA--EEELHKT 97
                6789************998776..7777665 PP

>> PF10359.4  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   6.5    0.0098       2.8     161     243 ..       9      93 ..       3     108 .. 0.69

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0098
   PF10359.4 161 ervqlelleeRlkeleeqi.kkleeklkelel.nkddeelqkdleelekelselkerleflekeleelekeeeeseksssskkes 243
                 +  q+e ++eR ++l +q  +++  ++ ++++ + ++ e+++  ++le ++  l+++l  l++e+e+ ++e ++ + ++ + +e+
  MMETSP1325-20131115|1126_1   9 QVQQRETITERAETLVRQKgEEIAAMAAQIKQlSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEE 93 
                 556899******9997664256666666666667788888888888888888888888888888888887777655554443333 PP

>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.6    0.0016      0.47      83     128 ..       3      48 ..       1      53 [. 0.91
   2 ?    2.1   1.3      0.47   1.3e+02      89     118 ..      58      87 ..      47     101 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0016
   PF04859.7  83 iqeqrsllktyeivvkkLeaelrakdseieelrekleeakkankkl 128
                 +  +r++++++e++ ++ e  +r+k +ei  + +++++++ +n+++
  MMETSP1325-20131115|1126_1   3 LSSLRQQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREV 48 
                 6789*********************************999999875 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.47
   PF04859.7  89 llktyeivvkkLeaelrakdseieelrekl 118
                 ++++ e+ + +L  e +   +e ++lr k 
  MMETSP1325-20131115|1126_1  58 KVRDLEAKLGELTDEHERASEELKRLRVKK 87 
                 455555555556655555555555555443 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.9      0.01       2.9      34      96 ..       6      72 ..       1      77 [. 0.46
   2 ?    7.7   2.5     0.011       3.1      33      77 ..      54      98 ..      46     107 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.01
                HHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT......HHCCCHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17 34 ldeerrelqveleelqaerNelskeIgkakkkk....edaeeliaevkelkeelkaleaelkeleae 96
                l +++++ ++ +e++ +   +  +eI+ + ++      +  e+++  ++l  ++ +lea+l el++e
  MMETSP1325-20131115|1126_1  6 LRQQVQQRETITERAETLVRQKGEEIAAMAAQIkqlsGQNREVREGKRQLEFKVRDLEAKLGELTDE 72
                3333333333333333333333444433333321113444555555566666666777777776666 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.011
                HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHH CS
  PF02403.17 33 eldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevk 77
                +l+ ++r l+++l el  e+ ++s+e++++  kk +aee ++++k
  MMETSP1325-20131115|1126_1 54 QLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTK 98
                688899999999999999999999999999999955555444433 PP

>> PF07246.6  Phlebovirus nonstructural protein NS-M
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   3.9    0.0078       2.2     174     241 ..      21      89 ..       2      94 .. 0.71
   2 ?   -0.4   0.0       1.7   4.7e+02     179     198 ..      89     108 ..      85     110 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0078
   PF07246.6 174 hseieqlknelqkkRndikr.gqekrdakklveesmArvkdlkeelkiltdelsqikseiqilrkkikd 241
                    + q+ +e+     +ik+ + ++r++++  ++++ +v+dl  +l  ltde +++ +e++ lr k  +
  MMETSP1325-20131115|1126_1  21 ETLVRQKGEEIAAMAAQIKQlSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQ 89 
                 44456666666666666765333456777888889999999999999999*****99999999987655 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 1.7
   PF07246.6 179 qlknelqkkRndikrgqekr 198
                 q ++el+k + d+ +++e+ 
  MMETSP1325-20131115|1126_1  89 QAEEELHKTKHDLGKAEERG 108
                 77899999999999999986 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   9.4      0.02       5.8      62     146 ..       8      94 ..       5     101 .. 0.81
   2 ?    5.8   2.0     0.031       8.8      65     107 ..      67     109 ..      63     111 .] 0.86

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.02
  PF03962.10  62 eakkklkteleklkkeleelkqrikelqaeieke.kkkreeteereelleelkeleeelkklkkele.klakldpekveklkeetev 146
                 +++++++t  e+++  + +  ++i+ + a+i++   ++re  e +++l  ++++le +l +l  e+e + ++l   +v+k+++e e 
  MMETSP1325-20131115|1126_1   8 QQVQQRETITERAETLVRQKGEEIAAMAAQIKQLsGQNREVREGKRQLEFKVRDLEAKLGELTDEHErASEELKRLRVKKVQAEEEL 94 
                 7889999999***********************945556666777788889999999999999999977777777788888776654 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.031
  PF03962.10  65 kklkteleklkkeleelkqrikelqaeiekekkkreeteeree 107
                  +l +e+e++ +el++l+ ++ ++++e+ k+k    ++eer +
  MMETSP1325-20131115|1126_1  67 GELTDEHERASEELKRLRVKKVQAEEELHKTKHDLGKAEERGS 109
                 5778899999999999999999999999999999999999865 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   7.2     0.032       9.2     108     181 ..      27     100 ..       2     107 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.032
   PF05266.9 108 kleerkklekeiaekeieqqeleseiaelerkilelrrkeallkekkeaedkeiarlkseasklkqeledvele 181
                 k ee +++  +i++   ++ e+ + +++le k++ l+ k   l    e++++e++rl+ ++ ++++el++++++
  MMETSP1325-20131115|1126_1  27 KGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHD 100
                 33445555555555566667778888889999999999988899999999999999999999999999999986 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   8.0      0.13        36      45     112 ..       8      75 ..       5     107 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.13
   PF14235.1  45 QAksikqtlaelaaelleleaksaaelkkkiekykkekkrikseakeleakakeaeeesdealhkhhr 112
                 Q  ++++t++e a++l++++ ++ a+++++i+++  ++ ++++ +++le k++++e++  e++ +h+r
  MMETSP1325-20131115|1126_1   8 QQVQQRETITERAETLVRQKGEEIAAMAAQIKQLSGQNREVREGKRQLEFKVRDLEAKLGELTDEHER 75 
                 556789999********999999*********************999999999999998888777765 PP

>> PF05178.7  KRI1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   2.4     0.079        23       8      61 ..      13      61 ..       6      73 .. 0.59
   2 ?    7.6   2.9     0.015       4.3       6      39 ..      71     103 ..      67     110 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.079
   PF05178.7  8 keekeeelkrlKnlkrkeieeklekikevaGlkekelseedlekvldedFDpek 61
                +e   e  + l + k +ei+   ++ik+ +G +++e+ e +       +F+  +
  MMETSP1325-20131115|1126_1 13 RETITERAETLVRQKGEEIAAMAAQIKQLSG-QNREVREGKR----QLEFKVRD 61
                3333444445556688899999999999999.5556655544....33444444 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.015
   PF05178.7   6 eekeekeeelkrlKnlkrkeieeklekikevaGl 39 
                 +e e+  eelkrl+ +k++ +ee+l k k+ +G 
  MMETSP1325-20131115|1126_1  71 DEHERASEELKRLRVKKVQ-AEEELHKTKHDLGK 103
                 6889999******988886.7999******9995 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   3.8       1.2   3.3e+02      68      93 ..      28      53 ..       1      66 [. 0.55
   2 ?    8.8   3.4    0.0041       1.2      58      99 ..      60     101 ..      57     106 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 1.2
                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15 68 eerketlekeiktlekqleklekele 93
                 e+++ + ++ik+l+ q +++++   
  MMETSP1325-20131115|1126_1 28 GEEIAAMAAQIKQLSGQNREVREGKR 53
                33333444444444444444443333 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0041
                 EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  58 qdkeevkeeLeerketlekeiktlekqleklekeleelkeel 99 
                 +d+e    eL +++e++++e+k+l+ ++ + e+el + k  l
  MMETSP1325-20131115|1126_1  60 RDLEAKLGELTDEHERASEELKRLRVKKVQAEEELHKTKHDL 101
                 478888899****************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1302  (0.0952311); expected 273.4 (0.02)
Passed bias filter:                      725  (0.0530281); expected 273.4 (0.02)
Passed Vit filter:                       142  (0.0103862); expected 13.7 (0.001)
Passed Fwd filter:                        57  (0.0041691); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              48  [number of targets reported over threshold]
# CPU time: 0.85u 0.32s 00:00:01.17 Elapsed: 00:00:00.74
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|1125_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 402.25
//
Query:       MMETSP1325-20131115|1127_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.72
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|1129_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-29  100.2   0.0    1.1e-28  100.0   0.0    1.0  1  PF00069.20 Protein kinase domain
    4.9e-22   78.1   0.0    5.7e-22   77.9   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
     0.0062   15.5   0.0     0.0071   15.3   0.0    1.1  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.018   14.6   0.1      0.024   14.2   0.0    1.2  1  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.0   0.0   3.2e-32   1.1e-28      71     176 ..       8     114 ..       2     118 .. 0.91

  Alignments for each domain:
  == domain 1    score: 100.0 bits;  conditional E-value: 3.2e-32
                 TEEEEEEE--SC-EHHHHHHHHCCB..-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHH CS
  PF00069.20  71 delylvleyveggdlfdllkkegkl..seeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakey 176
                  +ly+v++++ ggdl++ll +++ +   ++   ++a qi+eg++ylH+++++HrD+K+eN+Lld+  + +iaDFG+a+ +e +++   t++gt eYmAPE++  +++y
  MMETSP1325-20131115|1129_1   8 WYLYVVTSFAGGGDLATLLFESTDIelGWRFRTSLACQIAEGMQYLHDQHVLHRDMKSENVLLDSAWTPQIADFGFARPVEGNDKYRMTICGTDEYMAPELMF-DEDY 114
                 5799***************96655543899999********************************************************************98.6665 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   0.0   1.7e-25   5.7e-22      76     182 ..      10     114 ..       2     118 .. 0.91

  Alignments for each domain:
  == domain 1    score: 77.9 bits;  conditional E-value: 1.7e-25
                 EEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEE CS
  PF07714.12  76 llivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkf 182
                 l++vt ++ gGdL ++L ++++ +l  +  +++a qia+Gm+yL++++++Hrd+ + NvLl++  + +i+DfG ar +e +d+y+++       ++mapE+++++ +
  MMETSP1325-20131115|1129_1  10 LYVVTSFAGGGDLATLLFESTDIELGWRFRTSLACQIAEGMQYLHDQHVLHRDMKSENVLLDSAWTPQIADFGFARPVEGNDKYRMTI--CGTDEYMAPELMFDEDY 114
                 89******************999*******************************************************9999997665..45679*******99876 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.1e-06    0.0071      99     155 ..      16      74 ..      10      94 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 2.1e-06
   PF06293.9  99 legaqdLaeilakwae..laeelkralleavGrliakmhragvnHtdlnahnilldeee 155
                  +g  dLa++l +  +  l+ + +  l  ++++ ++ +h+++v H+d+   n+lld   
  MMETSP1325-20131115|1129_1  16 FAGGGDLATLLFESTDieLGWRFRTSLACQIAEGMQYLHDQHVLHRDMKSENVLLDSAW 74 
                 56777999999988878899999********************************9875 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   6.9e-06     0.024     125     196 ..      12      85 ..       2      87 .. 0.62

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 6.9e-06
                 HHHHHHHHHHHHHHHCTHH.HHHHHHHH.......HHHHHHHHHHC....SS--EEB-SS-SGGGEEEETTTTEEEE---TT-B CS
  PF01636.18 125 llrllesataalvaselle.lleeleer.......vlaalaallpg....aeppvllHgDlhpgNllvdpddgrvgviDfedag 196
                 +   ++    +++a +l+e + +el  r        +a              ++ +lH+D ++ N+l+d+  ++  + Df++a+
  MMETSP1325-20131115|1129_1  12 VVTSFAGG--GDLATLLFEsTDIELGWRfrtslacQIA-------EgmqyLHDQHVLHRDMKSENVLLDSAWTPQ-IADFGFAR 85 
                 55555555..5556666665444444443333222233.......23334557999*************666666.99999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.75
# Mc/sec: 380.22
//
Query:       MMETSP1325-20131115|1128_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.67
# Mc/sec: 768.98
//
Query:       MMETSP1325-20131115|1130_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.41s 00:00:00.69 Elapsed: 00:00:00.63
# Mc/sec: 121.72
//
Query:       MMETSP1325-20131115|1132_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 199.70
//
Query:       MMETSP1325-20131115|1133_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.9   0.2       0.24   11.6   0.1    1.6  1  PF13781.1 DoxX-like family
       0.13   11.5   0.4       0.34   10.1   0.3    1.7  1  PF13056.1 Protein of unknown function (DUF3918)


Domain annotation for each model (and alignments):
>> PF13781.1  DoxX-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   3.6e-05      0.24       6      71 ..     127     190 ..     125     195 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 3.6e-05
   PF13781.1   6 ysGlvpkllfpepeelallaaaglsaelaslllilgglldialGlllllrrrrrlllllqiallla 71 
                 ++G++  +l+++p  l l a + +++ +++ + +l +ll+++++ + + ++++++l+  +ia+ ++
  MMETSP1325-20131115|1133_1 127 WTGTQESTLAEHP--LNLFATTAVHNGIWRCAYTLRSLLEVVVAYFYMQKYKTAALYTSAIAVGAG 190
                 6777777777777..8899999******************************99999998887655 PP

>> PF13056.1  Protein of unknown function (DUF3918)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.3     5e-05      0.34       5      16 ..     181     192 ..     179     200 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 5e-05
   PF13056.1   5 mtSLlalGaGaA 16 
                  tS++a+GaGaA
  MMETSP1325-20131115|1133_1 181 YTSAIAVGAGAA 192
                 69*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.80
# Mc/sec: 664.99
//
Query:       MMETSP1325-20131115|1134_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00049   19.8   0.1    0.00052   19.7   0.0    1.1  1  PF00424.13 REV protein (anti-repression trans-activator protein)


Domain annotation for each model (and alignments):
>> PF00424.13  REV protein (anti-repression trans-activator protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   3.8e-08   0.00052      13      70 ..      16      73 ..       4      81 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 3.8e-08
  PF00424.13 13 alrliklLyqsnPyPq.eeGtarqRrnrRrRwrqrqkqilalaerilstpldrpldepl 70
                 +rl++     +P P   +G+ r  r +RrR  qr  q  ++ er+   p ++    +l
  MMETSP1325-20131115|1134_1 16 PIRLLRQAQVVSPVPPaSSGAPRGARGARRRASQRLVQTVHVMERLDDIPAGQT-PLAL 73
                456666666678**99899**************************999986654.5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.28s 00:00:00.63 Elapsed: 00:00:00.57
# Mc/sec: 351.19
//
Query:       MMETSP1325-20131115|1135_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       537  (0.0392774); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.62
# Mc/sec: 378.78
//
Query:       MMETSP1325-20131115|1137_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       656  (0.0479813); expected 273.4 (0.02)
Passed bias filter:                      506  (0.0370099); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.68
# Mc/sec: 285.45
//
Query:       MMETSP1325-20131115|1140_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 502.31
//
Query:       MMETSP1325-20131115|1138_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-11   42.9   4.9    3.4e-11   42.5   3.4    1.2  1  PF05739.14 SNARE domain
  ------ inclusion threshold ------
      0.017   14.1   0.6      0.021   13.8   0.4    1.1  1  PF00261.15 Tropomyosin
       0.11   12.1   0.0       0.18   11.4   0.0    1.3  1  PF11712.3  Endoplasmic reticulum-based factor for assembly of V-ATPase
       0.19   11.1   1.0       0.37   10.2   0.7    1.4  1  PF09976.4  Uncharacterized protein conserved in bacteria (DUF2133)
        1.2    8.8   3.8        8.3    6.1   2.6    2.1  1  PF13807.1  G-rich domain on putative tyrosine kinase
        3.1    5.1   5.0          1    6.6   0.3    1.7  2  PF05478.6  Prominin


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   3.4   1.5e-14   3.4e-11       1      63 []      47     109 ..      47     109 .. 0.99

  Alignments for each domain:
  == domain 1    score: 42.5 bits;  conditional E-value: 1.5e-14
                 HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF05739.14   1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalryqk 63 
                 er++e   l+++++ ++++  d+g  v+eQ  ++d+I++ + s++s+++++  +l+ka ++qk
  MMETSP1325-20131115|1138_1  47 EREQEFLALNQNVRMVNEIYRDLGAIVDEQQGQVDDIESMINSTTSKTKDGIAQLDKAKKHQK 109
                 89***********************************************************98 PP

>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.4   9.1e-06     0.021     121     198 ..      30     107 ..      17     115 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 9.1e-06
  PF00261.15 121 klvvvekdLeraeeraeaaeskiaeLeeelkvvgnnlksLevseekaseredkyeekiklLtekLkeaetRaeeAErs 198
                 kl+ v+++ e  +e a++ e++   L++++++v +  ++L +  ++ + + d+ e  i++ t+k k+  +  ++A ++
  MMETSP1325-20131115|1138_1  30 KLTAVQTEEEFQREIAREREQEFLALNQNVRMVNEIYRDLGAIVDEQQGQVDDIESMINSTTSKTKDGIAQLDKAKKH 107
                 56666666666667777889999*******************************************999998888765 PP

>> PF11712.3  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.8e-05      0.18      18     101 ..      46     136 ..      29     143 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.8e-05
   PF11712.3  18 pekspeflallerLraaqeedeYkrlirdvdksqknskp.........spaakkdeeddefgvelkevkrqlslvlNilvsvvgtffavyywa 101
                  e  +eflal ++ r+ +e   Y+ l   vd++q + +          s++++   + d+ +++ k v+r    vl +lv v++++f+  +w 
  MMETSP1325-20131115|1138_1  46 REREQEFLALNQNVRMVNE--IYRDLGAIVDEQQGQVDDiesminsttSKTKDGIAQLDKAKKHQKGVNRGCAWVLCFLVLVLCVVFGFVFWD 136
                 3337888888888888888..6777776677766654448899987765555555667778899999***************99988654464 PP

>> PF09976.4  Uncharacterized protein conserved in bacteria (DUF2133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.7   0.00016      0.37      16      35 ..     117     136 ..     116     137 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00016
   PF09976.4  16 wiivgavlalagvaGwrgwq 35 
                 w+++ +vl+l  v+G+ +w+
  MMETSP1325-20131115|1138_1 117 WVLCFLVLVLCVVFGFVFWD 136
                 9******************7 PP

>> PF13807.1  G-rich domain on putative tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   2.6    0.0036       8.3       2      30 ..      48      76 ..      47     135 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0036
   PF13807.1  2 tqqevLrLtrDvevntelYtqLlnkaqel 30
                 +qe L L+++v++ +e+Y  L   + e+
  MMETSP1325-20131115|1138_1 48 REQEFLALNQNVRMVNEIYRDLGAIVDEQ 76
                58*******************95444433 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.3   0.00046         1     647     711 ..      28      93 ..      14     100 .. 0.84
   2 ?    0.6   0.7      0.03        67      79     107 ..     100     130 ..      85     135 .. 0.58

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00046
   PF05478.6 647 elkneakdl.rslqqnlveplesllekLnssvksLdekssklqeavkdvLaeveaaeaflnnnase 711
                  lk  a ++  ++q++++ + e+   +Ln++v+  +e  ++l + v++   +v++ e ++n  +s+
  MMETSP1325-20131115|1138_1  28 GLKLTAVQTeEEFQREIAREREQEFLALNQNVRMVNEIYRDLGAIVDEQQGQVDDIESMINSTTSK 93 
                 5555554441579***********************************************998776 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.03
   PF05478.6  79 kveekk..lelleyeagvlvcavigvLfivl 107
                 + +++k  ++ +++  ++++c +++vL +v+
  MMETSP1325-20131115|1138_1 100 QLDKAKkhQKGVNRGCAWVLCFLVLVLCVVF 130
                 4444334466667777777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1090  (0.079725); expected 273.4 (0.02)
Passed bias filter:                      873  (0.0638531); expected 273.4 (0.02)
Passed Vit filter:                       104  (0.00760679); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.41s 00:00:00.97 Elapsed: 00:00:00.63
# Mc/sec: 562.95
//
Query:       MMETSP1325-20131115|1139_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.4e-09   35.9   1.5      1e-08   35.0   1.0    1.5  1  PF09812.4 Mitochondrial ribosomal protein L28


Domain annotation for each model (and alignments):
>> PF09812.4  Mitochondrial ribosomal protein L28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   1.0   7.5e-13     1e-08      55     147 ..      92     185 ..      48     191 .. 0.83

  Alignments for each domain:
  == domain 1    score: 35.0 bits;  conditional E-value: 7.5e-13
   PF09812.4  55 krrqrkllklseeelerraliekkWakykqqereaeeqqlkeqleaqeeAleeLkkespeLYeaAikpekg..llPlelkgPtdtPPiknYeaPd 147
                 +  +r+++ +seee  rr+ i  ++++    e+++ +  ++  +   ++A+e L +e  + Y+  + ++k+  ++Pl+ + Pt+tPPi+ Y+a d
  MMETSP1325-20131115|1139_1  92 DSPRRTPPPVSEEEAARRHKIATEYQRGCSREHNHMMWDMQLKIDLKKQAMEALPEEQ-RAYADELPTAKElfDFPLDFRYPTYTPPIHGYRADD 185
                 333566669*************************99999***************9876.568888877777689*****************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.42s 00:00:00.92 Elapsed: 00:00:00.72
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|1144_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.051   12.2   0.0      0.066   11.9   0.0    1.1  1  PF00496.17 Bacterial extracellular solute-binding proteins, family 5 Middle
      0.092   12.1   1.1       0.14   11.5   0.8    1.2  1  PF10228.4  Uncharacterised conserved protein (DUF2228)


Domain annotation for each model (and alignments):
>> PF00496.17  Bacterial extracellular solute-binding proteins, family 5 Middle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.7e-06     0.066     231     312 ..      82     168 ..      80     177 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 9.7e-06
                 HHHHHHTT---EEE-SSSSTTTTTTCCCCGS-HHCH.....SHHHHHHHHHHH---BSSS--.SBB..B.EEEEEEEESSHHHHHHHH CS
  PF00496.17 231 eeivkavleglatpansllppsspgynpyftkapda.....ydpekAkklLeeaGykdgkgggrrkk.kllltlllasgdptskaiae 312
                 +e+ ++v + +++ a+s++   + ++ +  ++   a      +pe A++lL++a  + ++ ++++ +  +++++  a    + +a+ae
  MMETSP1325-20131115|1144_1  82 DEVYRQVVKAHYGSATSFVDAVMESSLDRIASGT-AmdelrQNPELARALLDAAQATPRTTESLTRDlVASFLTPSAEVVKEKQAVAE 168
                 5788999999999999999999988888877765.35888899****************99999888766666666666666666655 PP

>> PF10228.4  Uncharacterised conserved protein (DUF2228)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.8   2.1e-05      0.14      78     146 ..      23      89 ..       9      95 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.1e-05
   PF10228.4  78 svvgenvfdAillflekksketdfkkkkkaalkkieeklkekakeldlsleekkkvlkkrekkvvtktf 146
                 +v ge+v + +l+fl+k++  ++ k+ k +al++  +++++++++++   +++++++++re +v ++++
  MMETSP1325-20131115|1144_1  23 TVAGETV-SNMLDFLSKELVRKEEKE-KLQALSRHATDMRRSRETEESGKRQAEEKVRAREDEVYRQVV 89 
                 4455555.5689*****998877766.899999999*********9*****************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1273  (0.09311); expected 273.4 (0.02)
Passed bias filter:                      615  (0.0449824); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.65
# Mc/sec: 707.85
//
Query:       MMETSP1325-20131115|1141_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 453.60
//
Query:       MMETSP1325-20131115|1147_1  [L=477]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-42  142.7   2.4    8.9e-35  119.9   0.1    2.8  3  PF07724.9  AAA domain (Cdc48 subfamily)
    1.1e-15   57.8   0.1    5.6e-07   29.7   0.0    2.5  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
    4.1e-08   32.9   1.2    2.5e-05   23.9   0.0    2.8  3  PF07728.9  AAA domain (dynein-related subfamily)
    7.7e-08   32.0   0.9    2.7e-07   30.2   0.6    2.0  1  PF10431.4  C-terminal, D2-small domain, of ClpB protein
    2.1e-05   24.5   2.1      0.003   17.5   0.1    3.3  2  PF13401.1  AAA domain
     0.0001   22.5   0.1    0.00065   20.0   0.0    2.3  1  PF13191.1  AAA ATPase domain
     0.0002   22.0   0.3     0.0021   18.7   0.0    2.6  2  PF13207.1  AAA domain
    0.00028   20.0   0.0     0.0037   16.3   0.0    2.5  3  PF01078.16 Magnesium chelatase, subunit ChlI
    0.00033   19.7   0.7      0.001   18.1   0.0    2.1  3  PF06414.7  Zeta toxin
    0.00059   18.8   1.3      0.031   13.2   0.0    3.0  2  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    0.00099   18.6   0.4       0.23   10.9   0.0    3.2  3  PF07931.7  Chloramphenicol phosphotransferase-like protein
     0.0013   18.1   0.1      0.026   13.8   0.0    2.7  3  PF00158.21 Sigma-54 interaction domain
     0.0014   18.4   0.0       0.22   11.2   0.0    2.6  2  PF13173.1  AAA domain
     0.0031   17.2   0.1      0.012   15.4   0.0    2.1  1  PF13671.1  AAA domain
     0.0033   16.1   0.1      0.075   11.7   0.0    2.3  2  PF00493.18 MCM2/3/5 family
     0.0046   17.1   1.4      0.032   14.4   0.0    2.7  3  PF13238.1  AAA domain
      0.006   15.2   0.0     0.0095   14.5   0.0    1.3  1  PF00503.15 G-protein alpha subunit
     0.0094   15.3   0.0      0.019   14.3   0.0    1.4  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain
  ------ inclusion threshold ------
      0.012   14.9   0.1       0.06   12.7   0.0    2.1  2  PF10662.4  Ethanolamine utilisation - propanediol utilisation
      0.017   14.7   0.5        2.1    7.8   0.0    2.4  2  PF01637.13 Archaeal ATPase
      0.045   13.4   0.2       0.18   11.5   0.0    2.0  2  PF04851.10 Type III restriction enzyme, res subunit
      0.046   13.0   2.9       0.37   10.1   1.3    3.0  2  PF00270.24 DEAD/DEAH box helicase
       0.06   12.8   0.1       0.72    9.3   0.0    2.6  2  PF05729.7  NACHT domain
      0.062   12.5   0.0       0.15   11.3   0.0    1.6  1  PF01695.12 IstB-like ATP binding protein
      0.088   12.4   0.1       0.78    9.4   0.0    2.4  2  PF13245.1  Part of AAA domain
       0.19   11.5   1.7       0.84    9.4   0.0    2.6  3  PF13521.1  AAA domain


Domain annotation for each model (and alignments):
>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   2.6e-07   0.00014       5      68 ..      96     159 ..      94     164 .. 0.87
   2 !  119.9   0.1   1.7e-37   8.9e-35      21     171 .]     231     363 ..     203     363 .. 0.90
   3 ?   -2.2   0.1       5.7     3e+03      37      67 ..     386     416 ..     367     419 .. 0.65

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 2.6e-07
                 -EEEE-------HHHHHHHHHHTT-....--EEEEGGG---....----THHHHHHHHHTTT-HHHHT CS
   PF07724.9   5 silllgptgvGktelakalaellfvkkekkliradaselle....eeevehlvsrligappgyvgaee 68 
                 +il++gptg+Gkte+a+ +a+l ++    ++  ++a++++e    + +v++++  l   +   +++++
  MMETSP1325-20131115|1147_1  96 NILMIGPTGCGKTEIARRIAKLSQA----PFLKVEATKFTEvgfhGRDVDQIIRDLVEVSLTLTKKKQ 159
                 89*********************96....************999999999999998876666666555 PP

  == domain 2    score: 119.9 bits;  conditional E-value: 1.7e-37
                 HHHHHHTT-.........--EEEEGGG-------THHHHHHHHHTTT-HHHHT---EEEETGGG----.------------HHHHHHHH---EE-------EE-TT--EEEE------TTGGGTS-STTTTSGGG--HHHHHH----TTT-----EE CS
   PF07724.9  21 kalaellfv.....kkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpk.essgadvSregVqrdLLqileggtltdkqgrkvdtknilfImtgafgsskisdesrskeeeeekkkeevedllkkglipEllgRlpei 171
                 + l +++++     ++ kk+ + +a+ ++ee+e+e+l +   ++++++ ++ee+Giv++DEidKi+++    gad S egVqrdLL+++eg+ +++k+g +v+t+ ilf+++gaf+ sk+sd                       l +El+gRlp++
  MMETSP1325-20131115|1147_1 231 EVLGKFQKMankrpSEMKKMRIREARPVIEEQELEKLMEAIDIKKEAISAVEESGIVFIDEIDKICSSgAYRGADASAEGVQRDLLPLIEGSAVNTKYG-NVNTDFILFVCSGAFHHSKPSD-----------------------LLAELQGRLPIR 363
                 455555555666778899*********************************************************************************.**********************.......................999999999985 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 5.7
                 EEEGGG-------THHHHHHHHHTTT-HHHH CS
   PF07724.9  37 radaselleeeevehlvsrligappgyvgae 67 
                 ++   el++ e+ve +++ + + + + v+ae
  MMETSP1325-20131115|1147_1 386 IKQQIELMKTENVELVIDDEAVREIARVAAE 416
                 4445567777777777777777766666665 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   1.1e-09   5.6e-07       1      90 [.      97     195 ..      97     206 .. 0.79
   2 !   25.8   0.0   1.7e-08   8.7e-06      41     107 ..     259     339 ..     227     367 .. 0.68

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 1.1e-09
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS......-SEEEEEETGGGC-HHH.....SS..TTHCHHHHHHHH CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakeka......kpsilfiDEidalaksr.....sgseseeeervvnqLl 90 
                 +l++Gp G+GKT +a+ +ak ++++fl++++++++   vg   +++ ++++++ e +      k+  +++  + ++a++r     +g + +++++ + qLl
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLSQAPFLKVEATKFT--EVGFHGRDVDQIIRDLVEVSltltkkKQAEILMPQVQRVAEDRileilTGPHPRDSRESFRQLL 195
                 699********************************..7888899999998887655556666444777777777777777776666666666666666666 PP

  == domain 2    score: 25.8 bits;  conditional E-value: 1.7e-08
                 HHHHHHHHHHHHH..HHTS.....-SEEEEEETGGGC-HHH.SS..TTHCHHHHHHHHHHHHHTTTT......S.TEEEEE CS
  PF00004.24  41 esekkirelfkea..keka.....kpsilfiDEidalaksr.sgseseeeervvnqLlteldgvkkk......eskvivig 107
                   e+++++l++++  k++a     +  i+fiDEid++++s   ++++ ++e v+  Ll+ ++g   +      + ++i+ +
  MMETSP1325-20131115|1147_1 259 IEEQELEKLMEAIdiKKEAisaveESGIVFIDEIDKICSSGaYRGADASAEGVQRDLLPLIEGSAVNtkygnvNTDFILFV 339
                 44566666666652255558899666***************99999*****************998877777744444443 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   4.7e-08   2.5e-05       1      37 [.      96     132 ..      96     157 .. 0.95
   2 !    7.0   0.0    0.0077         4      56      78 ..     274     296 ..     238     300 .. 0.76
   3 ?   -2.6   0.1       7.1   3.7e+03      62      91 ..     394     423 ..     367     433 .. 0.63

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 4.7e-08
                 EEEEE------HHHHHHHGGGGBS--EEEEE--TT-- CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtt 37 
                 ++l++Gp+G+gK+e+a+r+a++ +++++ v  t++t+
  MMETSP1325-20131115|1147_1  96 NILMIGPTGCGKTEIARRIAKLSQAPFLKVEATKFTE 132
                 689****************************999986 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0077
                 .--------G-SEEEEESGGG-- CS
   PF07728.9  56 dsplvraaregeilvlDEverae 78 
                 ++++  a++e+ i+++DE++++ 
  MMETSP1325-20131115|1147_1 274 KKEAISAVEESGIVFIDEIDKIC 296
                 445566777***********985 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 7.1
                 ---G-SEEEEESGGG---HHHHHHHHHHHS CS
   PF07728.9  62 aaregeilvlDEveraesevlnsLlsllee 91 
                 + ++ e +++DE  r    v+++ ++ le+
  MMETSP1325-20131115|1147_1 394 KTENVELVIDDEAVREIARVAAETNRTLEN 423
                 444666677777776666666666666665 PP

>> PF10431.4  C-terminal, D2-small domain, of ClpB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.6   5.1e-10   2.7e-07       1      62 [.     369     439 ..     369     449 .. 0.88

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 5.1e-10
                 --HHHHHHHHHH...HHHHHHHHHHT.TT-EEEE-HHHHHHHHC--.....--TT---TTHHHHHHHHTHH CS
   PF10431.4   1 LskeelkkIvdl...qlkklekrlae.rgveleltdealdalaekg.....ydpeyGARpLrriiereied 62 
                 L+++++ +I+++    l k++  l++ ++vel ++dea++++a+ +     + ++ GAR L +i+er +e+
  MMETSP1325-20131115|1147_1 369 LTEDDMYRILTEpvtNLIKQQIELMKtENVELVIDDEAVREIARVAaetnrTLENIGARRLHTIVERIMEE 439
                 89**********99977777777776699****************9676667789************9996 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   5.7e-06     0.003       7      86 ..      97     174 ..      94     319 .. 0.86
   2 ?    3.1   0.2      0.17        87      51     109 ..     349     428 ..     322     441 .. 0.61

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 5.7e-06
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapast.......spkellqkllsalglpakg......rltteellealqealrrr 86 
                 ++ +G++G+GKT  +rr+a+          +a++++vea++ t       +  ++ ++l++              ++++e l+ ++q+++++r
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLS--------QAPFLKVEATKFTevgfhgrDVDQIIRDLVE-------VsltltkKKQAEILMPQVQRVAEDR 174
                 6789****************98........9999999999999554433333333222222.......2333443345555557777776655 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.17
   PF13401.1  51 pkellqkllsalglpakg.........rltteellealqealrrrrt...rlliiDEaqr.L......seealeel..rs 109
                 p++ll +l + l    +          r  te +++ + ++++  +t   +l+i DEa r +      + ++le++  r+
  MMETSP1325-20131115|1147_1 349 PSDLLAELQGRLPIRVELkglteddmyRILTEPVTNLIKQQIELMKTenvELVIDDEAVReIarvaaeTNRTLENIgaRR 428
                 5555555555555444445455555554444555555555555555577799999***9987544333255555554444 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.2e-06   0.00065      25     127 ..      96     274 ..      81     319 .. 0.60

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 1.2e-06
   PF13191.1  25 lllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn...............................lpysaiiqa.................lrellrqlltelaaelggwreallaalga...................................lipelegiiglqalvalldaalar 127
                 ++l +Gp G+GK+ ++r++ak   +  l ++a kf +++++                               +       +                  re +rqll+  a   ++ + + +++++                                    +i e+  +i++q+l++l++a+  +
  MMETSP1325-20131115|1147_1  96 NILMIGPTGCGKTEIARRIAKLSQAPFLKVEATKFTEVGFHgrdvdqiirdlvevsltltkkkqaeilmpqvQ-------RvaedrileiltgphprdSRESFRQLLRDGALDDRSIEVEVAQKSPGdkggviqvdspvsvqevlgkfqkmankrpsemkkmRIREARPVIEEQELEKLMEAIDIK 274
                 899**************************************77666655555555544444444433332220.......1222222233333333334444444444444444444444433333355556666666666666666666666666666555555555555555555555555555 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0     4e-06    0.0021       2      44 ..      97     141 ..      96     235 .. 0.77
   2 ?    0.8   0.0       1.3   7.1e+02      66      78 ..     391     418 ..     253     464 .. 0.65

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 4e-06
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG..B--GGGS-B--.- CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd..llreeglkeld.d 44 
                 i+ +Gp+G+GK+ +a+++a+    p l  ++  +  e g+ ++d d
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLSQAPFLKVEAtkF-TEVGFHGRDvD 141
                 899*****************76777776666333.55555555533 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 1.3
                 .....H..HHHHHH.............T CS
   PF13207.1  66 a..kkdtlswvidg.............a 78 
                 +  k+++  +vid+             +
  MMETSP1325-20131115|1147_1 391 ElmKTENVELVIDDeavreiarvaaetN 418
                 2333444445555544333333333331 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.83   4.3e+02       5      19 ..      61      75 ..      58      84 .. 0.88
   2 !   16.3   0.0   7.1e-06    0.0037      24      45 ..      96     117 ..      90     138 .. 0.83
   3 ?   -2.1   0.0       2.9   1.5e+03     105     117 ..     282     294 ..     270     297 .. 0.73

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.83
  PF01078.16  5 vkGqeeakraleiaa 19
                ++Gq +akra+ ia 
  MMETSP1325-20131115|1147_1 61 IVGQPDAKRAVAIAM 75
                89***********96 PP

  == domain 2    score: 16.3 bits;  conditional E-value: 7.1e-06
  PF01078.16  24 nlllvGppGsGKtmlakrlpsl 45 
                 n+l++Gp G+GKt +a+r+++l
  MMETSP1325-20131115|1147_1  96 NILMIGPTGCGKTEIARRIAKL 117
                 9******************987 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 2.9
  PF01078.16 105 ahnGvLfLDElpe 117
                  + G++f+DE+ +
  MMETSP1325-20131115|1147_1 282 EESGIVFIDEIDK 294
                 467*******865 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.9e-06     0.001      13      93 ..      91     173 ..      81     214 .. 0.75
   2 ?   -3.5   0.0         8   4.2e+03     134     162 ..     227     261 ..     220     281 .. 0.43
   3 ?   -1.3   0.0       1.6   8.5e+02      67     121 ..     370     419 ..     355     445 .. 0.67

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 1.9e-06
   PF06414.7  13 qekpkavllgGqpGAGKtslaellleelaagnivridaDelrkyh...payrelekkdpkeaseltqkdaselveklidralek 93 
                 +  pk +l+ G++G+GKt++a+++ +   +  +++++a ++ +      +++++ ++  +   +lt+k+  e+   +++r++e 
  MMETSP1325-20131115|1147_1  91 EVVPKNILMIGPTGCGKTEIARRIAKLS-QAPFLKVEATKFTEVGfhgRDVDQIIRDLVEVSLTLTKKKQAEILMPQVQRVAED 173
                 55699********************998.9999999999987743335566666666666666666666666655555555555 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 8
   PF06414.7 134 lSelgilqRyeeelae.kge......gRrvpkevhd 162
                 +S + +l  +++++++   +       R   +   +
  MMETSP1325-20131115|1147_1 227 VSVQEVLGKFQKMANKrP-SemkkmrIREARPVIEE 261
                 555555555555522211.11112222333333333 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 1.6
   PF06414.7  67 dpkeaseltqkdaselveklidralekgyniilegtlrspdkarkiarklkkagy 121
                  ++++++++ + +++l +++i+ +  + + ++++     ++++r+iar +++ ++
  MMETSP1325-20131115|1147_1 370 TEDDMYRILTEPVTNLIKQQIELMKTENVELVID-----DEAVREIARVAAETNR 419
                 5667777777777777777777777777777776.....4444444444444433 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   5.9e-05     0.031      21      74 ..      55     118 ..      37     149 .. 0.80
   2 ?    2.7   0.4      0.09        47      96     115 ..     278     297 ..     245     434 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.9e-05
   PF05496.7  21 ksleeyi.gqekvkeklkifieaakkreeald.........hvllyGpPGlGkttlakiiakel 74 
                 ++l++yi gq + k+ ++i+++   +r++  d          +l++Gp G Gkt +a+ iak  
  MMETSP1325-20131115|1147_1  55 QKLDDYIvGQPDAKRAVAIAMRNRWRRHQLPDdlktevvpkNILMIGPTGCGKTEIARRIAKLS 118
                 578999559*************999998877733333333358***************999855 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.09
   PF05496.7  96 ltnleekdvlfideihrlsr 115
                 ++++ee+ ++fidei ++ +
  MMETSP1325-20131115|1147_1 278 ISAVEESGIVFIDEIDKICS 297
                 56678888888888887754 PP

>> PF07931.7  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00044      0.23       4      40 ..      97     133 ..      95     161 .. 0.90
   2 ?    2.4   0.0      0.18        96      39      89 ..     237     290 ..     232     309 .. 0.79
   3 ?    1.3   0.0      0.39   2.1e+02      75     101 ..     441     466 ..     389     475 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00044
                 EEE-----------HHHHHHHSSS-EEEE--HHHHHH CS
   PF07931.7   4 ilLnGgsssGKsslaralqevldepwlhlgvDafvea 40 
                 il+ G +  GK+ +ar + +++++p+l+++  +f+e 
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLSQAPFLKVEATKFTEV 133
                 78889999**********************9999885 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.18
                 HHS-GGGGT-----B-------B.--HHHHH----...----HHHHH---EEEEE CS
   PF07931.7  39 ealppkrqdeadglefeteleei.gpeldlllaal...yeavaamaraGnnvivD 89 
                 +++ +kr +e + ++    +++i ++el++l++a+   +ea+ a+ + G   i D
  MMETSP1325-20131115|1147_1 237 QKMANKRPSEMKKMRIREARPVIeEQELEKLMEAIdikKEAISAVEESGIVFI-D 290
                 4589999999999999999999988899999999744479********98655.4 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.39
                 --HHHHH---EEEEE-------HHHHH CS
   PF07931.7  75 avaamaraGnnvivDdvilekewlvdl 101
                 + +a  r+G +++vD+++++++  +dl
  MMETSP1325-20131115|1147_1 441 SFEAPDREGEKMVVDKALVNERV-SDL 466
                 45688899*******99999985.554 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   4.9e-05     0.026      22      60 ..      94     129 ..      78     134 .. 0.83
   2 ?    0.4   0.0      0.69   3.6e+02      93     106 ..     283     296 ..     273     302 .. 0.82
   3 ?   -2.3   0.0       4.4   2.3e+03      75      88 ..     298     311 ..     296     313 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.9e-05
                 -S-EEEE-------HHHHHHHHHTSTTTTS--EEEETTT CS
  PF00158.21  22 dltvlitGesGtGKellAraiheaskrkkkpfvavncaa 60 
                 + ++l+ G +G+GK+ +Ar i + s+   +pf++v+ ++
  MMETSP1325-20131115|1147_1  94 PKNILMIGPTGCGKTEIARRIAKLSQ---APFLKVEATK 129
                 579******************99887...7888877665 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.69
                 ----EEEET----- CS
  PF00158.21  93 dgGtLfLDeigelp 106
                 + G++f+Dei ++ 
  MMETSP1325-20131115|1147_1 283 ESGIVFIDEIDKIC 296
                 68********9875 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 4.4
                 --------S----- CS
  PF00158.21  75 kGaFtGAekekkGl 88 
                 +Ga+ GA+++ +G+
  MMETSP1325-20131115|1147_1 298 SGAYRGADASAEGV 311
                 7*******999985 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00042      0.22       3      73 ..      95     170 ..      93     204 .. 0.60
   2 ?    4.6   0.0     0.047        25      50      74 ..     273     302 ..     236     372 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00042
   PF13173.1   3 kilvitGpRrvGKttllkqlakell......keesilyinlddeelrkladpellelfleklkekkkylflDEiqev 73 
                 k ++++Gp ++GKt +++++ak         +  ++ ++ +   + +++    l e+ l+++k+k+  +++  +q+v
  MMETSP1325-20131115|1147_1  95 KNILMIGPTGCGKTEIARRIAKLSQapflkvEATKFTEVGFHGRDVDQIIRD-LVEVSLTLTKKKQAEILMPQVQRV 170
                 78999***************97666333333333333333333222222111.223333332223333666666666 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.047
   PF13173.1  50 llelfleklke......kkkylflDEiqev......p 74 
                 +++       e      ++ ++f+DEi ++      +
  MMETSP1325-20131115|1147_1 273 IKK-------EaisaveESGIVFIDEIDKIcssgayR 302
                 222.......12334447889******9985555550 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.2e-05     0.012       2      39 ..      97     134 ..      97     212 .. 0.69

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 2.2e-05
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrlsqdtlrkrlfg 39 
                 +l++G+ G+GK+  a+r++k  ++ +l   + + +  g
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLSQAPFLKVEATKFTEVG 134
                 79*****************9999999888875554444 PP

>> PF00493.18  MCM2/3/5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00014     0.075      17      83 ..      52     120 ..      44     136 .. 0.80
   2 ?    1.7   0.0      0.16        82     121     133 ..     283     295 ..     279     300 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00014
  PF00493.18  17 klvksiapsiyghedvkkaillqlfggvkk.kledktk.lrgdinvllvGdpgtaKSqlLkyveklapr 83 
                 ++v+++   i+g+ d k+a+++++    ++ +l+d  k      n+l++G  g++K+++ + ++kl++ 
  MMETSP1325-20131115|1147_1  52 EIVQKLDDYIVGQPDAKRAVAIAMRNRWRRhQLPDDLKtEVVPKNILMIGPTGCGKTEIARRIAKLSQA 120
                 688899999***************99887515566555233456*******************998865 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.16
  PF00493.18 121 dkGvcciDefdkm 133
                 + G++ iDe+dk+
  MMETSP1325-20131115|1147_1 283 ESGIVFIDEIDKI 295
                 68**********7 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   6.1e-05     0.032       1      35 [.      97     146 ..      97     181 .. 0.68
   2 ?    0.5   0.1       1.2   6.3e+02      48      82 ..     259     293 ..     242     302 .. 0.81
   3 ?   -2.5   0.0       9.9   5.2e+03      75      82 ..     430     437 ..     381     465 .. 0.52

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 6.1e-05
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl...............gdvlrdlakengl 35 
                 Il  G++G+GKt++a+++a+                 g + rd+ +   +
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLSqapflkveatkftevGFHGRDVDQIIRD 146
                 6778**************99845555666666666665555555544444 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 1.2
   PF13238.1  48 skeldedkldelldkleeneselaegenviidghl 82 
                  +e   +kl+e++d  +e +s+ +e+++v id + 
  MMETSP1325-20131115|1147_1 259 IEEQELEKLMEAIDIKKEAISAVEESGIVFIDEID 293
                 56777888999999999999999999999999876 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 9.9
   PF13238.1  75 nviidghl 82 
                 + i++ + 
  MMETSP1325-20131115|1147_1 430 HTIVERIM 437
                 22333333 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.8e-05    0.0095      37     195 ..      73     298 ..      14     317 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.8e-05
                 T---XXXXXXXXXXXXXXXXXEEEEEEEXXXXXXXHHHHHHHHHHHXXXXXXXXHHHHHHHHHHHHHHHHHHHHXXXHHHHHHXSS............................XHHHHHXXXHHHHXXXXXSSXX............................................................XXHHHHXXXCTCHHXHHHHHHHTXXXXSXX......XTTHHHHHTTHHHHHST CS
  PF00503.15  37 rsslnddiskkleeekkkkkkevklLlLGqgeSGKsTilkqfkllykpgfsreeraswraviylnivrsiktilealekleielsls.k.........................seeneeqleklksrldpldeieal..........................................................vleelaedikelwndpgvqevlerrrkikl......edsaeyFldnleriasp 195
                 +  +n+ ++ +l  + k +  + ++L++G +++GK+ i + +  l +  f + e  ++++v ++   r + +i++ l + + +l  + +                          ++                                                                               ++++  ++ + + + + + +++ +  +ik       e+s   F+d++++i+s+
  MMETSP1325-20131115|1147_1  73 IAMRNRWRRHQLPDDLKTEVVPKNILMIGPTGCGKTEIARRIAKLSQAPFLKVEATKFTEVGFHG--RDVDQIIRDLVEVSLTLTKKkQaeilmpqvqrvaedrileiltgphpRDS--------------------ResfrqllrdgalddrsievevaqkspgdkggviqvdspvsvqevlgkfqkmankrpseMKKMRIREARPVIEEQELEKLM-EAIDIKKeaisavEESGIVFIDEIDKICSS 298
                 445556666677777888888899************************************99984..66666666666666666544323344434445555555555555554222....................244444444444444444555888888899999999999988888888888777777776666666666666666666665.444444444444455555599999999986 PP

>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   3.6e-05     0.019      17      86 ..      96     174 ..      86     184 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.6e-05
                 xxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxx RF
  PF00006.20  17 ttlipGafgcGktvisqslskns.....nsdaiiyvgiGergnevaevleef.......rkepimkrttlvantsnepvaar 86 
                  +l++G+ gcGkt i+ +++k s     + +a+ ++ +G +g++v ++++++       +     k+  + + + ++ ++ r
  MMETSP1325-20131115|1147_1  96 NILMIGPTGCGKTEIARRIAKLSqapflKVEATKFTEVGFHGRDVDQIIRDLvevsltlT---KKKQAEILMPQVQRVAEDR 174
                 6899*******************6666667777999**************9966554431...2244455555555555555 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   0.00011      0.06       2      24 ..      95     117 ..      94     136 .. 0.77
   2 ?   -1.7   0.0         3   1.6e+03      92     137 ..     382     424 ..     367     431 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00011
   PF10662.4   2 kkilliGkvgaGKTtLtqalkge 24 
                 k+il+iG++g+GKT +++++ + 
  MMETSP1325-20131115|1147_1  95 KNILMIGPTGCGKTEIARRIAKL 117
                 78****************99874 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 3
   PF10662.4  92 viGiiT.kidlaedeenielveelLkaaGaekifevsavekegieel 137
                 v  +i  +i+l+ ++e   +ve  +    +++i +v a ++  +e++
  MMETSP1325-20131115|1147_1 382 VTNLIKqQIELM-KTE---NVELVIDDEAVREIARVAAETNRTLENI 424
                 555443134444.344...4444577777888888888887777765 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0041       2.1      23      45 ..      97     119 ..      90     198 .. 0.73
   2 ?    4.5   0.2      0.04        21      74     207 ..     240     385 ..     225     403 .. 0.58

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0041
                 EEEE--TT---HHHHHHHHHH-. CS
  PF01637.13  23 iviyGprrsGKTaLlkeileelk 45 
                 i+  Gp ++GKT + ++i++  +
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLSQ 119
                 5667*************999874 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.04
                 HHS-SHHHHHHHHT....-----.TS-GG.G--HHHHHHHHHH----EEEEEETGGGGG.----...........---HHHHHHHHHHHH....-TTEEEEE-------HHH.TT-TTSTT------.EE-----HHHHHHHHH---GGG CS
  PF01637.13  74 ekkklakalgialpkaeleeilk.kksklvflaleellealkkkgkkiiiiiDElqkli.lgln...........gakslvkeLlnlids.ltkekhlcvvlclSseglfie.lvyskaplegRhky.ilvkdfdketalnflregfeel 207
                  +k+ +++++ ++++a+   i + ++ ++  +a++  +ea++  ++  i+ iDE+ k+                  +++l+  +    ++ +  + +  ++l   s    ++   +  a+l gR    +++k ++++++  +l e   +l
  MMETSP1325-20131115|1147_1 240 ANKRPSEMKKMRIREARP-VI-EeQELEKLMEAIDIKKEAISAVEESGIVFIDEIDKICsS--GayrgadasaegVQRDLLPLIEGSAVNtKYGNVNTDFILFVCSGAFHHSkPSDLLAELQGRLPIrVELKGLTEDDMYRILTEPVTNL 385
                 344444444444544333.23.33555666888888888888888889*********9943..244666665555555555555544433245555555665555544444455555666666666666666666666666666655555 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00034      0.18      23      54 ..      92     123 ..      62     131 .. 0.74
   2 ?   -1.9   0.1       4.4   2.3e+03     113     154 ..     255     291 ..     226     297 .. 0.52

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00034
  PF04851.10  23 dekkrglivmaTGtGKTlvaasliarlar.kfl 54 
                    k++l   +TG+GKT +a + ia+l +  fl
  MMETSP1325-20131115|1147_1  92 VVPKNILMIGPTGCGKTEIARR-IAKLSQaPFL 123
                 56799***************97.9999887555 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 4.4
  PF04851.10 113 eiilttiqklhkaleeeeend.eskseslealldefdviiiDE 154
                  + +++ q+l+k +e    +d +++     +  +e  +++iDE
  MMETSP1325-20131115|1147_1 255 ARPVIEEQELEKLMEA---IDiKKE---AISAVEESGIVFIDE 291
                 3445555555555442...222211...222334455777777 PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.6   8.3e+02      55      84 ..      15      41 ..      14      78 .. 0.71
   2 ?   10.1   1.3   0.00071      0.37      15      50 ..      95     267 ..      81     419 .. 0.56

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 1.6
                ESSHHHHHHHHHHHHHHTTT.SS.EEEEETT CS
                xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
  PF00270.24 55 aPtreLaeqtlnnlkkfkky.pklrvlliig 84
                aP r+L +q +  +++ k++ p+l +    g
  MMETSP1325-20131115|1147_1 15 APQRALSAQAAAVVEETKEPePDLAI----G 41
                799***********999998544433....3 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00071
                 -EEEEEC-TT---HHHHHHHHHHHHHH..H....TTSTS.........................................................................................................................................E CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxx.........................................................................................................................................x RF
  PF00270.24  15 gdvlvaaeTGsGKTlaflipvlqilletlk....kttik.........................................................................................................................................k 50 
                 +++l+ ++TG GKT+++   +  +l +       +  +k                                                                                                                                          
  MMETSP1325-20131115|1147_1  95 KNILMIGPTGCGKTEIARRIA--KLSQA-PflkvE-ATKftevgfhgrdvdqiirdlvevsltltkkkqaeilmpqvqrvaedrileiltgphprdsresfrqllrdgalddrsievevaqkspgdkggviqvdspvsvqevlgkfqkmankrpsemkkmrirearpvieeqelekL 267
                 89*************987522..22111.112121.111344455555555555666666666666666666666666666666666666666666666666666666666666666666666666555555555555555555555555555555555555555555555555550 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0    0.0014      0.72       3      25 ..      97     119 ..      95     137 .. 0.85
   2 ?    0.3   0.0      0.76     4e+02     119     119 ..     324     324 ..     227     384 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0014
   PF05729.7   3 vilqGeaGsGKTtLlqklasawa 25 
                 +++ G+ G+GKT  ++++a++ +
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLSQ 119
                 7899**************98765 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.76
   PF05729.7 119 l 119
                 +
  MMETSP1325-20131115|1147_1 324 V 324
                 1 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00029      0.15      48      68 ..      95     115 ..      89     126 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00029
  PF01695.12  48 enlvllGpsGvGKthlAialg 68 
                 +n++++Gp+G GKt +A  ++
  MMETSP1325-20131115|1147_1  95 KNILMIGPTGCGKTEIARRIA 115
                 79************9998766 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0015      0.78      10      36 ..      95     123 ..      88     187 .. 0.74
   2 ?   -0.3   0.0       1.6   8.3e+02      46      60 ..     412     427 ..     399     446 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0015
   PF13245.1  10 npllvvtGgPGtGKTttlaaiiaall....a 36 
                  ++l+  G+ G GKT  +a++ia l      
  MMETSP1325-20131115|1147_1  95 KNILM-IGPTGCGKT-EIARRIAKLSqapfL 123
                 56777.8********.999999999854440 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 1.6
   PF13245.1  46 llvaptgraakrl.se 60 
                  ++a t+r ++++ ++
  MMETSP1325-20131115|1147_1 412 RVAAETNRTLENIgAR 427
                 4788888888888333 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0016      0.84       2      27 ..      97     123 ..      96     163 .. 0.77
   2 ?   -2.8   0.0       9.3   4.9e+03     129     153 ..     265     289 ..     248     291 .. 0.54
   3 ?    0.2   0.1       1.1   5.8e+02      22      57 ..     396     434 ..     369     462 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0016
   PF13521.1   2 ivitGgpstGKTtlleaLaar.gypvv 27 
                 i ++G+ ++GKT +++++a++ + p +
  MMETSP1325-20131115|1147_1  97 ILMIGPTGCGKTEIARRIAKLsQAPFL 123
                 889***************987555544 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 9.3
   PF13521.1 129 edeeeaeaiderlrealeelgipvi 153
                 e++ ea +i++  ++a+ee gi +i
  MMETSP1325-20131115|1147_1 265 EKLMEAIDIKKEAISAVEESGIVFI 289
                 3344444445555555555555444 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 1.1
   PF13521.1  22 rgypvv..pEvarevleeklakgeealpwe..edllafae 57 
                 ++++ v   E++re+ + ++++++  l+    ++l  + e
  MMETSP1325-20131115|1147_1 396 ENVELVidDEAVREIARVAAETNRT-LENIgaRRLHTIVE 434
                 3555444677888887777766664.44443233333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       667  (0.0487858); expected 273.4 (0.02)
Passed bias filter:                      445  (0.0325483); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 1.03u 0.35s 00:00:01.38 Elapsed: 00:00:00.70
# Mc/sec: 1632.95
//
Query:       MMETSP1325-20131115|1146_1  [L=353]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-59  199.7   0.0    5.3e-59  199.4   0.0    1.1  1  PF01370.16 NAD dependent epimerase/dehydratase family
      3e-22   78.7   0.1    3.5e-21   75.2   0.1    2.0  1  PF02719.10 Polysaccharide biosynthesis protein
    1.7e-21   76.0   0.0    2.3e-21   75.6   0.0    1.1  1  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family
    2.3e-20   72.4   0.0    8.8e-18   64.0   0.0    2.2  2  PF07993.7  Male sterility protein
    5.3e-20   71.3   0.0    5.5e-20   71.2   0.0    1.1  1  PF04321.12 RmlD substrate binding domain
    8.4e-06   25.7   0.0    4.3e-05   23.4   0.0    2.0  1  PF13460.1  NADH(P)-binding


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.4   0.0   2.3e-62   5.3e-59       3     236 .]       1     239 [.       1     239 [. 0.95

  Alignments for each domain:
  == domain 1    score: 199.4 bits;  conditional E-value: 2.3e-62
                 EE--------HHHHHHHHH-TE..EE...EESSCSTCCCCCCHHH..TBEEEB--TT-HHHHHHHHHHHT.SEEEE--S---HHHCCCSHHHHHHHHT---HHHHHHHHHHTT.EEEEEEEGGG---B..SSSCB-TTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEE-TT...-SHHCHHHHHHHHHH---SEEEE--TT-EEEEEEHHHHHHHHHHHHHSSS.--EEEEE- CS
  PF01370.16   3 VtGatGfiGsalveallekgye..vv...nlirrtrseslatvri..rvelveldltdkdalerlfaeeqpdaVihlAaesgvdassedpadfieanvegtlnlleaarkagvkrflfasSsevygkd..aeqpikEetplgplspYaaaKlageklveayaeeyglnaiilrlfnvyGprnfdeevshvipalirkilegeevtllgdGtqlRdflyveDvaealllvlehgdvageiyniG 236
                 VtG++Gfi s+ v  l +k +e  v+   +l + ++  +l + +   ++++v++++++ d ++ ++ ee++d++ih+Aa+++vd+s+ +  +f ++n+ gt  lle a+ +g+krf+++s++evyg+   +e+p+kEe  l+p++pYaa+K+ +e lv++y+++++l++ii+r  nvyGp+   + ++++ip++i+++ +g++vtl g+G++ R flyveDva+a+  +l +g+  g+iyniG
  MMETSP1325-20131115|1146_1   1 VTGGAGFIASHAVMLLVRKYPElkVInfdKLDYCSCLRNLDPIKDepNYKFVKGNICSADMVNYVLTEEKIDTIIHFAAQTHVDNSFGNSFQFTQNNIFGTHVLLESAKIHGIKRFIHVSTDEVYGEGgeTEDPMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFDLPVIITRGNNVYGPH---QYPEKIIPKFINQLQRGRAVTLHGTGQNTRNFLYVEDVARAFEVILFKGQ-VGQIYNIG 239
                 9*********************7544877666666666555554488*********************************************************************************9999*************************************************...**************************************************.*******9 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.1   1.5e-24   3.5e-21       3     253 ..       1     263 [.       1     273 [. 0.85

  Alignments for each domain:
  == domain 1    score: 75.2 bits;  conditional E-value: 1.5e-24
  PF02719.10   3 vtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkeklkveivpvigdvrdkerleealeelkvdvvfhaAAlKhVPlveenpleavktNvlgtenvieaaieagvekvvliStD................KAvnPtnvmGatKrlaekllqalaeeseekktkfvvvRfGNVlgSr...GSviplFkkqikeggpvtvTdp.emtRyfmtieeavqLvlqagalakggeifvldmGepvkivdlakalielsgleeke 253
                 vtG++G i s+ v  +++k p ++ +++ d l   +  ++l   +++ ++k+      g++  ++ ++ +l+e k+d+++h AA  hV     n ++  ++N++gt+ ++e a+ +g+++++ +StD                   +Ptn + atK+ ae l+ +++++    +  ++++R  NV g +     +ip F +q+++g+ vt+  + + tR f+ +e+ ++     + +++ g+i+     + ++ vd+ak lie++g++ ++
  MMETSP1325-20131115|1146_1   1 VTGGAGFIASHAVMLLVRKYP-ELKVINFDKLDYCSCLRNLDPIKDEPNYKFV----KGNICSADMVNYVLTEEKIDTIIHFAAQTHVDNSFGNSFQFTQNNIFGTHVLLESAKIHGIKRFIHVSTDevygeggetedpmkeeHVLEPTNPYAATKAGAEFLVKSYHRSF---DLPVIITRGNNVYGPHqypEKIIPKFINQLQRGRAVTLHGTgQNTRNFLYVEDVARAFEVILFKGQVGQIYNIGGTNEISNVDVAKMLIEFMGMSDRT 263
                 8*********99988777766.5677777777777888887777777777666....8*********************************************************************33333333333332222579******************99998...899***********8733358*****************654278*********99999999999******988887888889***********98876 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   0.0     1e-24   2.3e-21       2     225 ..       1     223 [.       1     234 [. 0.83

  Alignments for each domain:
  == domain 1    score: 75.6 bits;  conditional E-value: 1e-24
  PF01073.14   2 VtGgsGFlGrrlvreLleleelkevrvldlrespelleelsklqvkt...vlegDvtdkekleealeg..vdvvihtaaiidvlgkaerd.eilkvnvkGTqnvleacvkagvrvlvYtSsaevvgpnvkgqeilnGdEetpyesthkdaYaesKalAEklvlkangrtlknggrllTcAlRpagiyGegd..kllvraleellksglallkigekevlsdrvYvgNvawah 225
                 VtGg+GF+ ++ v  L++  +  +v  +d+ +  + l +l  ++ +    +++g +++++ ++ +l +  +d++ih aa + v   + +  ++ + n+ GT+ +le+++ +g+++++++S+ ev g+  + ++ +    ++++   ++++Ya +Ka AE lv++          +l  +  R   +yG+ +  +++ ++  + l+ g a++  g+ +++ ++ Yv+ va a+
  MMETSP1325-20131115|1146_1   1 VTGGAGFIASHAVMLLVRKYPELKVINFDKLDYCSCLRNLDPIKDEPnykFVKGNICSADMVNYVLTEekIDTIIHFAAQTHVDNSFGNSfQFTQNNIFGTHVLLESAKIHGIKRFIHVSTDEVYGEGGETEDPM----KEEHVLEPTNPYAATKAGAEFLVKSYHR-----SFDLPVIITRGNNVYGPHQypEKIIPKFINQLQRGRAVTLHGTGQNTRNFLYVEDVARAF 223
                 9*****************99866677777666666666666665554566**************996433899********999855433158899******************************944444333....3445566889*************99887.....458999999*******97644789999999999999*********************987 PP

>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0014       3.1       1      26 [.       1      26 [.       1      28 [. 0.92
   2 !   64.0   0.0   3.9e-21   8.8e-18      85     248 ..      68     222 ..      38     223 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0014
   PF07993.7  1 lTGaTGfLGkvllekllrtqpevkiy 26
                +TG+ Gf++++ +  l+r+ pe+k++
  MMETSP1325-20131115|1146_1  1 VTGGAGFIASHAVMLLVRKYPELKVI 26
                8******************9998875 PP

  == domain 2    score: 64.0 bits;  conditional E-value: 3.9e-21
   PF07993.7  85 aeevdviihsAAtvnfeepyke...llrtNvlGtrevlelakklkklvllhvSTavvageregeveekvyeeeederaklkglpntYtqsKalaEklvreasrrsglpvviiRpsiivgesetGwiegsdlgldgllggvakgvlpeilgdpearldlvpvDyvana 248
                  e++d iih AA+++++++  +   + + N+ Gt+ +le ak +  ++++hvST  v+ge  ++       e+ +++++  + +n Y+ +Ka aE lv++++r+ +lpv+i R  +++g  +  ++   + ++  ++  +++g++ +++g+ +++ +++ v+ va+a
  MMETSP1325-20131115|1146_1  68 EEKIDTIIHFAAQTHVDNSFGNsfqFTQNNIFGTHVLLESAKIHGIKRFIHVSTDEVYGEGGET-------EDPMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFDLPVIITRGNNVYGPHQ--YP--EK-IIPKFINQLQRGRAVTLHGTGQNTRNFLYVEDVARA 222
                 579***************88874447789*************99999*******8888888743.......889999999999************************************222..22..33.567788888888888899998888999999888886 PP

>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.0   2.4e-23   5.5e-20      34     283 ..      53     307 ..       1     311 [. 0.85

  Alignments for each domain:
  == domain 1    score: 71.2 bits;  conditional E-value: 2.4e-23
                 T--TT-HHHHHHHHHHH--SEEEE------HHHHHH-HHHHHHHHT---HHHHHHHHH---E.EEEEEEGGG--..---SS-B-TTS-----S----TTT---HHHHHH-S....SEEEEEE-SEE--...---HHHHHHH-----SEEEE..ESS-B---EEHHHHHHHHHHHHHHT-.....---EE---B----HHHHHHHHHHH-----.EEEEE-GGGS--SS---SB--B--HHHHH-------BHHHHHHHHHH CS
  PF04321.12  34 eldltdpeavaalvkeakpdvvvnaAAytavdkaEseeeeayavnaegpenlAeaaaavgal.lihiSTdyVFd..GekkrpYeeddetaPlnvYGrtKlaGEqavlaanp....kalivRtawvyge..kgknfvktmlrlaaereelkv..vaDqlgsPTsaedlAdvllallekaaeeealagvyHlansgetswfdfAraifkelgadgeevkpissaefptpakrPansvLdtekleaafgiklrdwrealkevlk 283
                 + ++  ++ v+ +++e+k d ++++AA t vd+   ++ +  + n  g++ l e a+ +g++ +ih+STd V+   Ge++ p +e++  +P n Y++tK+  E  v++++      ++i R   vyg   + ++ + +++++++++  +++      + +  ++ed+A++   +l k +       +y++ +++e+s +d+A++ ++ +g++  + ++  ++ +p+ a    + +++++kl++++ ++  +++++l+++++
  MMETSP1325-20131115|1146_1  53 KGNICSADMVNYVLTEEKIDTIIHFAAQTHVDNSFGNSFQFTQNNIFGTHVLLESAKIHGIKrFIHVSTDEVYGegGETEDPMKEEHVLEPTNPYAATKAGAEFLVKSYHRsfdlPVIITRGNNVYGPhqYPEKIIPKFINQLQRGRAVTLhgTGQNTRNFLYVEDVARAFEVILFKGQV----GQIYNIGGTNEISNVDVAKMLIEFMGMSD-RTEAL-MTFVPDRAFNDLRYTINCAKLAELGWVEEVSFEDGLRRTVD 307
                 678999999***************************************************9549*********54488999**************************9766222357999******9866778999999999988887777214567788899*****999999988887....89*************************77.77777.55669999999999999999999999999999999999887 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   1.9e-08   4.3e-05       3     177 ..       1     223 [.       1     257 [. 0.80

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 1.9e-08
   PF13460.1   3 viGAtGktGrrivkellarg..........hevtalvRnpsklpessgvtivkkDlfdledlaeala..gvdvvvdafgarped.............regvkhlldalkaagvrrlvvvsaaglyrdkpglfelldkplf....keylrakaaaeell...eas.gldwtivrPaalfeaeettyelite...............gdpagesaisraDvAaal 177
                 v+G+ G +++  v  l+++           ++  +  Rn + ++++++ ++vk++++    +  +l    +d++++ +++++ d               g+  ll+++k +g++r++ vs+  +y +  +++ +++++ +    ++y++ ka ae l+    +s +l++ i r   +++++  + ++i +               ++++  ++  ++DvA+a+
  MMETSP1325-20131115|1146_1   1 VTGGAGFIASHAVMLLVRKYpelkvinfdkLDYCSCLRNLDPIKDEPNYKFVKGNICSADMVNYVLTeeKIDTIIHFAAQTHVDnsfgnsfqftqnnIFGTHVLLESAKIHGIKRFIHVSTDEVYGEGGETEDPMKEEHVleptNPYAATKAGAEFLVksyHRSfDLPVIITRGNNVYGPHQYPEKIIPKfinqlqrgravtlhgTGQNTRNFLYVEDVARAF 223
                 56666777777777666666443333333355555669999999999***********999999998667*****9998777755566666676677999**************************9988766677777799999999*9999997774445788***************9999999888888788777776654445566999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.62
# Mc/sec: 1364.38
//
Query:       MMETSP1325-20131115|1149_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-10   40.8   0.2    1.4e-10   40.4   0.1    1.1  1  PF05365.7  Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like
  ------ inclusion threshold ------
      0.021   14.2   3.1      0.023   14.0   2.1    1.2  1  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF05365.7  Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.1   2.1e-14   1.4e-10       2      50 ..      37      85 ..      36      88 .. 0.95

  Alignments for each domain:
  == domain 1    score: 40.4 bits;  conditional E-value: 2.1e-14
   PF05365.7  2 stlyntlfrRnsvfvgtIfagAfvferafDtgvdklwdslNkGklWkdi 50
                + ly +++  n  +++++fagA++ e  + ++++ lw+++N+Gkl +++
  MMETSP1325-20131115|1149_1 37 KGLYPMFMDSNMKYLTFVFAGAIAVEFVYGNVANMLWENANQGKLVEHV 85
                789******************************************9887 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   2.1   3.4e-06     0.023     117     135 ..      80     108 .]      45     108 .] 0.69

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 3.4e-06
                 ...........----XXXXXXXXXXXXXX CS
  PF03066.10 117 e..........eddeedeeeeddeeddde 135
                 +           ddee+eeee+de++dde
  MMETSP1325-20131115|1149_1  80 KlvehvdwskwCDDEEEEEEEEDEDEDDE 108
                 14445555556666666666666666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       535  (0.0391311); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 462.15
//
Query:       MMETSP1325-20131115|1148_1  [L=608]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   2.9e-154  514.0   0.0   3.4e-154  513.8   0.0    1.0  1  PF04053.9 Coatomer WD associated region


Domain annotation for each model (and alignments):
>> PF04053.9  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  513.8   0.0  2.5e-158  3.4e-154       1     442 [.      35     492 ..      35     493 .. 0.96

  Alignments for each domain:
  == domain 1    score: 513.8 bits;  conditional E-value: 2.5e-158
   PF04053.9   1 esevrqanikkkee......lkdgellslslkelgsieiypqslshnpngrfvlVcgdgeyiiytalawrnkaygkaldfvwvs..snrfavleksksvkifknfkekktksikleysvekifgGalLgvksesfisfYDweqkklvrridvkkvknViwsddgelvalvskdtvyilsynleavee.......deeegvedafevlhelseriksgaWvgdvfiYttsn.rLkYlvngevgiikhldktlyilgykgkenrlylldrdgnvvslelnlselefktavlrkdleevlkiiaksnllpsipkdegnkiirfLekkgypelAlqlvqDpetrFdLAlelgnLevAlelakeldsee........kWkkLgdaAlsqgniklaeeayqkakdfdkLllLylstgnkekLkkLakiaeekgdlniafqaalllgdvekcvdlLiksgrlpeAalfAktyg 442
                 ++e+ +a +k+++e      ++dge+l+ls k+lgs+eiypqs++hn ngrf++Vcgdgeyiiyt++a+rnk++g+aldf+w+    +++av+e+ + vk fknfke+kt +  l+ s+e++fgG++L +k +++++f+Dw+++ ++r+idv + ++V+w+++gel+ lv+++t y+l+y+ +av +       + eegve afe+lhel+ ++k+g Wvgd+f+Yt+++ rL+Y+v+ge+ ++ hld+++y lgy++ke+r++l+d+ +nvvs+++ l++lef+tav+r+d+e+      ++++lpsip++e+n+++rfLe++g++e Al++ +Dp+++FdL+lelg+L+vA+e++ ++ + +        kWk+Lgd+Als g+++ ae++ + ++d  +LllLy++tgn+e+++kLa +a++ g++n+af + +llg++e+cv+lL ++gr+peAa++A+ty 
  MMETSP1325-20131115|1148_1  35 NNEIVTATLKGIAEkveaegISDGERLPLSAKDLGSTEIYPQSVKHNCNGRFIVVCGDGEYIIYTSQALRNKSFGSALDFCWSGlgTGDYAVRETISRVKTFKNFKEHKTIKAPLS-SAEGLFGGQVLAIKGSDCVVFFDWSEGVFIRKIDVVP-TDVHWNESGELCLLVCEETCYVLKYDANAVTSaiennsfSAEEGVEGAFELLHELNDQVKTGEWVGDCFLYTNNSnRLNYFVGGEIMTLCHLDQEMYMLGYLPKEDRVFLIDKALNVVSYKVLLTVLEFQTAVVREDIEA------ANEILPSIPESEHNSVARFLESQGLKEEALSVTKDPDQKFDLSLELGKLDVAYEILLQIPEADkdttdtqsKWKRLGDLALSTGDLSRAEQCSEASGDTAGLLLLYTCTGNAEGVSKLAAQAKDLGKTNVAFISLFLLGRIEECVELLMDTGRIPEAAFLARTYM 492
                 578888888888777788899***************************************************************99999********************6666666.6************************************.****************************9999*****************************************999***************************************************************8......59******************************************************999944455677777********************************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (608 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       402  (0.0294032); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.96u 0.36s 00:00:01.31 Elapsed: 00:00:01.05
# Mc/sec: 1387.60
//
Query:       MMETSP1325-20131115|1152_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-12   44.8   0.2    1.1e-11   44.5   0.1    1.1  1  PF00403.21 Heavy-metal-associated domain


Domain annotation for each model (and alignments):
>> PF00403.21  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.1   8.2e-16   1.1e-11       1      59 [.       9      69 ..       9      72 .. 0.84

  Alignments for each domain:
  == domain 1    score: 44.5 bits;  conditional E-value: 8.2e-16
  PF00403.21  1 tvrvpgmhCagCaakvekalselpgVysvkvdlgkkkvvVegdieekllrkliekvek....a 59
                +++v +m+C+gC ++ ++ l++++gV++v+ dl++++v V+g + + ++++ +++++k    a
  MMETSP1325-20131115|1152_1  9 VFNV-QMSCGGCSGACTRILKKMDGVEEVDCDLDAQTVKVTGAELP-PAEDMLAALKKwgeaA 69
                5789.9************************************7766.5577777777644445 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 302.49
//
Query:       MMETSP1325-20131115|1153_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.61
# Mc/sec: 487.13
//
Query:       MMETSP1325-20131115|1155_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   25.1   0.2     0.0011   18.8   0.0    2.2  2  PF01734.17 Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> PF01734.17  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.5   0.0    0.0019        26      31      57 ..      17      43 ..      15      53 .. 0.86
   2 !   18.8   0.0   7.8e-08    0.0011     157     200 ..     105     152 ..      71     155 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.0019
  PF01734.17 31 isGtSaGaiiaallalgrdpaalvedl 57
                + G+S Ga+ a+ l +g  ++ +++++
  MMETSP1325-20131115|1155_1 17 FYGASLGAMFACGLVFGEQYPSTRAKI 43
                68***************9998888776 PP

  == domain 2    score: 18.8 bits;  conditional E-value: 7.8e-08
  PF01734.17 157 eddeddvpladavraSsafPglf....ppvsldgelyvDGGildNnPi 200
                   ++d+ +l++a++aS  +Pg        + ++g+  vDGG+ dN+P+
  MMETSP1325-20131115|1155_1 105 SHFDDKQDLISALLASQFIPGWThgpyAYHMFRGTPCVDGGLFDNVPT 152
                 5678999****************876666666999************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 1099.50
//
Query:       MMETSP1325-20131115|1156_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-23   82.6   0.0    2.6e-23   82.5   0.0    1.0  1  PF00044.19 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF00044.19  Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   0.0   1.9e-27   2.6e-23      31      99 ..       2      69 .]       1      69 [] 0.98

  Alignments for each domain:
  == domain 1    score: 82.5 bits;  conditional E-value: 1.9e-27
                E-TTS-HHHHHHHHH--S-----SS-EEE---EEEETTEEEEEE--SSGGGS-GGG----EEEE----- CS
  PF00044.19 31 ndlagdletlayllkydsvhgrfkgeveveeeklivngkkikvlaerdpeelpwkelgvdlVvesTGvf 99
                ndl+ d++tla+llkyds hgrf+g+ve++++++ivngk i v+aerdp++lpw++lgv++V+esTG f
  MMETSP1325-20131115|1156_1  2 NDLT-DTHTLAHLLKYDSNHGRFPGTVEADDNNIIVNGKAIPVTAERDPKNLPWSKLGVEIVLESTGFF 69
                7888.**************************************************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.63
# Mc/sec: 262.46
//
Query:       MMETSP1325-20131115|1150_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   12.7   0.1        1.5    8.5   0.0    2.2  2  PF03981.7 Ubiquinol-cytochrome C chaperone


Domain annotation for each model (and alignments):
>> PF03981.7  Ubiquinol-cytochrome C chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0    0.0094   1.3e+02      34      65 ..      62      93 ..      43     111 .. 0.82
   2 ?    8.5   0.0   0.00011       1.5      33      82 ..     150     199 ..     121     200 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.0094
   PF03981.7 34 geeieqelldkffedvdeklreegvgdlsvpk 65
                +e+i+ +l +k+++ v +++ e+g+g + ++k
  MMETSP1325-20131115|1150_1 62 DEKIAGKLAEKLVDVVPAAVEEMGIGLSMDQK 93
                48899999999999999999999999877665 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00011
   PF03981.7  33 egeeieqelldkffedvdeklreegvgdlsvpkrlkklaeafygrllayd 82 
                  ++++   l +k+ e + +kl e++++ ++v+ + ++ ae+fy  + a+d
  MMETSP1325-20131115|1150_1 150 VNTKVTESLMEKLAEILPQKLAENQIEATCVAMSAQDQAEYFYEQISALD 199
                 45788899************************************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       752  (0.0550029); expected 273.4 (0.02)
Passed bias filter:                      536  (0.0392042); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 875.76
//
Query:       MMETSP1325-20131115|1157_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-22   78.6   0.0    5.1e-22   78.1   0.0    1.3  1  PF02779.19 Transketolase, pyrimidine binding domain


Domain annotation for each model (and alignments):
>> PF02779.19  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   0.0   3.7e-26   5.1e-22     106     178 .]       2      97 ..       1      97 [. 0.98

  Alignments for each domain:
  == domain 1    score: 78.1 bits;  conditional E-value: 3.7e-26
                 --EEEEEEE--------TSS-SSHHHHHCTSTT.......................-EEE--SSHHHHHHHHHHHHH-S-..-EEEEE-SSEEC.T CS
  PF02779.19 106 pvgvvtrlpigvgedGpehqsaeleaflrlipg.......................lkvvrPsdpaetkgllrraieredrkPvvlrlpkqllrhk 178
                 ++g+v++lp+g+++ Gpeh+s+++e+fl+  ++                       +++v+Ps+pa+++++lrr+++re+rkP+++  +k llrhk
  MMETSP1325-20131115|1157_1   2 QSGLVMLLPHGYQGAGPEHSSCRIERFLQNSDEdpdkipknldtlkgqirsiqknnWQIVNPSTPANYFHCLRRQLHREFRKPLIIPATKALLRHK 97 
                 688*******************************************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.77
# Mc/sec: 784.26
//
Query:       MMETSP1325-20131115|1158_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.77
# Mc/sec: 301.88
//
Query:       MMETSP1325-20131115|1160_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0033   17.8   0.6     0.0036   17.6   0.4    1.0  1  PF00841.14 Sperm histone P2
  ------ inclusion threshold ------
       0.04   13.8   3.2      0.049   13.5   2.2    1.1  1  PF13628.1  Domain of unknown function (DUF4142)
       0.55    9.9   4.3       0.63    9.7   3.0    1.0  1  PF09744.4  JNK_SAPK-associated protein-1


Domain annotation for each model (and alignments):
>> PF00841.14  Sperm histone P2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.4     8e-07    0.0036       7      46 ..       6      45 ..       2      52 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 8e-07
  PF00841.14  7 rspsesphqesrqqlegeeqgeeqglspedvevygrthrG 46
                +s  e+  +++rqq+e++e  e q l++++ e++++t+r 
  MMETSP1325-20131115|1160_1  6 KSDKEAMADQYRQQKEDQELAELQALKAQNAEDFKKTYRN 45
                577889999****************************986 PP

>> PF13628.1  Domain of unknown function (DUF4142)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.2   1.1e-05     0.049      63      98 ..      14      51 ..       2      53 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.1e-05
   PF13628.1 63 pd..taldakaqakldkLkalsgaaFDkaYleaqveah 98
                 +  ++ ++++ a+l++Lka + ++F k Y ++ + +h
  MMETSP1325-20131115|1160_1 14 DQyrQQKEDQELAELQALKAQNAEDFKKTYRNQLIGDH 51
                335667788899999******************99999 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.0   0.00014      0.63      56      98 ..       6      47 ..       2      51 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00014
   PF09744.4 56 eedkerLskqyerekelrkqaeekllelEdeleqekkelekki 98
                + dke +  qy+++ke ++ ae + l++ +++e+ kk++++++
  MMETSP1325-20131115|1160_1  6 KSDKEAMADQYRQQKEDQELAELQALKA-QNAEDFKKTYRNQL 47
                789***********************87.568999****9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1204  (0.0880632); expected 273.4 (0.02)
Passed bias filter:                      816  (0.059684); expected 273.4 (0.02)
Passed Vit filter:                        88  (0.00643651); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.97
# Mc/sec: 140.82
//
Query:       MMETSP1325-20131115|1159_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.74
# Mc/sec: 440.41
//
Query:       MMETSP1325-20131115|1162_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.72
# Mc/sec: 775.49
//
Query:       MMETSP1325-20131115|1163_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.70
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|1161_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-07   30.4   0.0    5.8e-07   29.5   0.0    1.4  1  PF12697.2  Alpha/beta hydrolase family
     0.0074   15.7   0.1       0.13   11.6   0.0    2.0  2  PF00561.15 alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   8.5e-11   5.8e-07      29     215 ..       2     246 ..       1     250 [. 0.68

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 8.5e-11
                 EE-----------S...S--HHHHHHHHHHHHHH--......--EEEE--------HHHHHH----.EEEEE..EE------STT---TTHHHHHHHHHH----....--H..HHHHH....-....----HHHHHH.....--GGGG....GG...........................................------HHHHTT-....-S-EEEEE-----HHH..HHHHHHHHHHSTTEEEEE---SSS CS
   PF12697.2  29 apDlpGhGrSdrppdydpdtledlaadlaalldalgl.....rpvvlvGHSlGgavalaaaarrpdlvrglv..lidppgplpasalrpagpsllrrllagraaalrdlaarafarlf....d....gdelealvra.....daaalaellraa...........................................lldadlrealarl....dvPvlviageaDrvvp..peearrlaealpgarvvvlpgagH 215
                 a D +G+  +++p +yd + ++ l  d+  ++d+ gl     +++++v+H++G+ v+++  a     v +++  l++++       l +++ + +++ + g+++ +  l a+ ++r++    +    +++ ++++++     d++  a++ ++                                              + d  ++ a++    d Pvl+ +g+aD+     +    + a+ + + ++  ++++gH
  MMETSP1325-20131115|1161_1   2 ACDARGYSPNAAPYNYDSYHYDKLQTDISSIVDESGLstpfdGKFHIVAHDQGARVVWHSIA-----VGSVAerLLSFAS------LSIPHADVFSDAIYGGNTNPDELQAAQYFRQLvlpnSttggPADNNEIWNSvclptDYDTRANCQKGLwwyngaidagavalppmewgsswedggladfvgipyetveeytTYPTDGVPQTAKVgnvtDFPVLYACGGADKPDLceETFNTQSAAYITDYSYLKVENCGH 246
                 789**********99*******************999999999***************8775.....4444444444444......3555556666666666666666666666665533330333344445555445555544444444444455556666667777777777777777777788888888887774555555555555444789**********965463444455566678999999999999 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   1.9e-05      0.13      21     114 ..      16     115 ..       4     166 .. 0.84
   2 ?    2.2   0.0     0.014        98     197     218 ..     229     250 ..     207     265 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.9e-05
                 .GGGGSHHHHHHHHHHHHHHSTSSS.....EEEEE-B---HHHHHHHHHCGG..GEEEEEEESB--HHSHCSHSTTCHC.HHHHHHHHCCHHHHHHHHHHHC CS
  PF00561.15  21 elphyttddlardleavldalglkk.....ltlvGhSmGGmialayaaeypd..rvkamvllgtvavlsdglssdvlnr.gstltlladnvagrlskgikpl 114
                 ++++y++d l  d+  ++d+ gl       +++v+h++G++ +++  a      r  ++++l+ +  + d++s++++   ++  +l+a+ +++ l+ +++  
  MMETSP1325-20131115|1161_1  16 NYDSYHYDKLQTDISSIVDESGLSTpfdgkFHIVAHDQGARVVWHSIAVGSVaeRLLSFASLSIP--HADVFSDAIYGGnTNPDELQAAQYFRQLVLPNSTT 115
                 577888888889999999998888777778***************999888888**********9..**********9966666777888887777766655 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.014
                 HHHCSTTEEEEEETTHHCSHHH CS
  PF00561.15 197 laelipksqlvvidgpgHlafl 218
                 +a+ i   ++++++++gH +++
  MMETSP1325-20131115|1161_1 229 SAAYITDYSYLKVENCGHKVLE 250
                 48889999**********9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.33s 00:00:00.88 Elapsed: 00:00:00.63
# Mc/sec: 1034.62
//
Query:       MMETSP1325-20131115|1164_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 676.12
//
Query:       MMETSP1325-20131115|1151_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-36  121.3   0.8    7.1e-36  121.2   0.6    1.0  1  PF00240.18 Ubiquitin family
    2.1e-21   75.2   0.7    2.3e-21   75.1   0.5    1.0  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
    7.5e-05   22.3   0.0    8.4e-05   22.2   0.0    1.0  1  PF13019.1  Telomere stability and silencing
    0.00028   20.5   0.1    0.00061   19.4   0.1    1.6  1  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
     0.0024   17.6   0.0     0.0027   17.4   0.0    1.1  1  PF11470.3  GLUT4 regulating protein TUG
     0.0031   17.5   0.0     0.0037   17.3   0.0    1.1  1  PF10302.4  DUF2407 ubiquitin-like domain
  ------ inclusion threshold ------
      0.087   12.7   0.0       0.17   11.8   0.0    1.5  1  PF11069.3  Protein of unknown function (DUF2870)
       0.11   12.4   0.2       0.66    9.9   0.1    1.9  1  PF09379.5  FERM N-terminal domain
        0.2    9.8   0.7        2.7    6.1   0.2    1.9  2  PF08337.7  Plexin cytoplasmic RasGAP domain


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.6   4.7e-39   7.1e-36       1      69 []       6      74 ..       6      74 .. 0.99

  Alignments for each domain:
  == domain 1    score: 121.2 bits;  conditional E-value: 4.7e-39
                EESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
  PF00240.18  1 ktlsgktitlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69
                ktl+gktitl+vepsdt++++K+ki++kegip+dqqrLi++Gk+LeD+rtls+yniq++stlhlvlrlr
  MMETSP1325-20131115|1151_1  6 KTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
                89*****************************************************************87 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.5   1.5e-24   2.3e-21       1      72 []       1      71 [.       1      71 [. 0.99

  Alignments for each domain:
  == domain 1    score: 75.1 bits;  conditional E-value: 1.5e-24
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE- CS
   PF11976.3  1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvvi 72
                ++i++k+ +gk+++++V+p++t+++++++ ++k+gip+ +q+rLiF G++L++ +t+ d++i++++t+++v+
  MMETSP1325-20131115|1151_1  1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
                89************************************.******************************996 PP

>> PF13019.1  Telomere stability and silencing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   5.5e-08   8.4e-05       1      88 [.       1      76 [.       1      77 [] 0.87

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 5.5e-08
   PF13019.1  1 invlvssldglslpktlsltlpstatvsdlvdklserlpaslteslvLtttsnkqlssssdlslssllsssedaeflslrlslrlcGG 88
                ++++v++l+g    kt++l ++++ t++++ +k++++ ++++++++++  +  kql  ++  +ls++  ++e+    +l+l+lrl+GG
  MMETSP1325-20131115|1151_1  1 MQIFVKTLTG----KTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIF-A-GKQL--EDGRTLSDYNIQKES----TLHLVLRLRGG 76
                69********....9**************************99865443.3.4566..788889999988888....9*********9 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.1     4e-07   0.00061      11      88 ..       9      72 ..       1      74 [. 0.75

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 4e-07
                ---EE-EEEE-TT-BHHHHHHHHHHHS-TT------SGGGEEEE----B--TTSBGGGGS--TTS-----EEEEEEE- CS
   PF13881.1 11 dGkDigpfkfseattvaelkekvlaeWpkekeskpksandlklilaGkiLednktLkelrlplgevkggvtvmHvvvr 88
                 Gk +  + +++++t++++k+k+     ++ke  p   ++ +li aGk Led +tL++++++ +       ++H+v+r
  MMETSP1325-20131115|1151_1  9 TGK-TITLDVEPSDTIENVKQKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQKES------TLHLVLR 72
                566.5667788999999999999.....56777554..4559*****************766554......4777765 PP

>> PF11470.3  GLUT4 regulating protein TUG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.8e-06    0.0027       5      65 .]       9      69 ..       5      69 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.8e-06
   PF11470.3  5 nfrrvkvkvtpsttltqVleeackkfkldsneytLkhnnkpldlslpfRlanLpngakLeL 65
                ++++ ++ v+ps+t+  V ++   k ++ +++ +L + +k+l+   ++   n+   + L L
  MMETSP1325-20131115|1151_1  9 TGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
                68999*************************************9999998888888888866 PP

>> PF10302.4  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   2.4e-06    0.0037      14      63 ..      13      58 ..       2      68 .. 0.79

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 2.4e-06
   PF10302.4 14 lrldinspnsltvaeLkrliRerlpgdlsrrrLrlIyaGkvLndesalas 63
                ++ld++   s t+++ k+ i+++ +   +  + rlI+aGk L+d  +l++
  MMETSP1325-20131115|1151_1 13 ITLDVE--PSDTIENVKQKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSD 58
                566777..899***********9955554..4578*********999986 PP

>> PF11069.3  Protein of unknown function (DUF2870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00011      0.17       3      33 ..      42      73 ..      40      76 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00011
   PF11069.3  3 qLwfagkelkrgkklsdy.vGkNektkiivkl 33
                 L fagk+l+ g++lsdy + k     ++ +l
  MMETSP1325-20131115|1151_1 42 RLIFAGKQLEDGRTLSDYnIQKESTLHLVLRL 73
                689***************66666666666665 PP

>> PF09379.5  FERM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00044      0.66       1      32 [.       5      36 ..       5      74 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00044
                EE-----EEEEEEECTSSHHHHHHHHHHH--- CS
   PF09379.5  1 VklLDgtvkevtvdksatgavlletVcqklgl 32
                Vk+L g++ +++v++s+t++ + +++ +k g+
  MMETSP1325-20131115|1151_1  5 VKTLTGKTITLDVEPSDTIENVKQKIQDKEGI 36
                88999*********************999998 PP

>> PF08337.7  Plexin cytoplasmic RasGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.2    0.0017       2.7     197     223 ..       6      32 ..       1      41 [. 0.83
   2 ?    2.7   0.0     0.018        27     271     289 ..      54      72 ..      39      76 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0017
                 STTTS-SEEEEEETTSBHHHHHHHHHH CS
   PF08337.7 197 qeeaeeavsvkvldcDtisqvkekvld 223
                 +  + +++++ v  +Dti  vk+k+ d
  MMETSP1325-20131115|1151_1   6 KTLTGKTITLDVEPSDTIENVKQKIQD 32 
                 555667899****************87 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.018
                 -BHHHHT--TT-EEEEEES CS
   PF08337.7 271 ntlahYkvsdgatlalvkk 289
                  tl +Y+++  +tl+lv +
  MMETSP1325-20131115|1151_1  54 RTLSDYNIQKESTLHLVLR 72 
                 59**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 318.14
//
Query:       MMETSP1325-20131115|1166_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 294.29
//
Query:       MMETSP1325-20131115|1167_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.3   1.5        3.6    7.8   0.0    3.6  3  PF00560.28 Leucine Rich Repeat
     0.0031   16.9   3.3      0.055   13.0   0.3    3.0  2  PF12799.2  Leucine Rich repeats (2 copies)
     0.0087   15.6   1.5       0.18   11.4   0.3    2.9  3  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.031   14.2   2.3         31    4.9   0.1    3.5  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0085        29       2      17 ..       8      33 ..       7      37 .. 0.69
   2 !    7.8   0.0     0.001       3.6       2      15 ..      39      60 ..      38      67 .. 0.71
   3 !    6.6   0.1    0.0027       9.1       2      21 ..      64      84 ..      63      85 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0085
                ESEEEETSSBCB.C.........HHH CS
  PF00560.28  2 LeeLdLsgNnlt.s.........lpp 17
                Le+L++ ++ +  +         + +
  MMETSP1325-20131115|1167_1  8 LEVLNMEFCGFNrNtgeskitgdIES 33
                99*******99844677775544444 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.001
                ESEEEETSSBCB.C.......H CS
  PF00560.28  2 LeeLdLsgNnlt.s.......l 15
                L++L+Lsg  ++ +       l
  MMETSP1325-20131115|1167_1 39 LQVLNLSGGFIStKftgnikdL 60
                9*******99994455554444 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0027
                ESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsn 21
                ++ L+L  + nl+ +++  + n
  MMETSP1325-20131115|1167_1 64 ITDLNLEWCtNLEgNIQA-FAN 84
                678**********99999.887 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.3   1.6e-05     0.055       3      37 ..       8      50 ..       8      62 .. 0.57
   2 !    8.5   0.8    0.0004       1.4       3      34 ..      39      72 ..      39      91 .. 0.63

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.6e-05
   PF12799.2  3 LevLdLsnNnIkd......lppelanLpn..LktLnLsnNpis 37
                LevL+   +          + +++ +L+n  L++LnLs+  is
  MMETSP1325-20131115|1167_1  8 LEVLNMEFCGFNRntgeskITGDIESLKNcpLQVLNLSGGFIS 50
                6666655553321112222666666677666*******98887 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0004
   PF12799.2  3 LevLdLsnNnIk.dlppelanLp.nLktLnLsnN 34
                L+vL+Ls+  I+ +  + ++ Lp + + LnL+ +
  MMETSP1325-20131115|1167_1 39 LQVLNLSGGFIStKFTGNIKDLPqSITDLNLEWC 72
                8999999985543455445555544666665543 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.13   4.4e+02      20      33 ..       2      14 ..       1      19 [. 0.75
   2 !   11.4   0.3   5.2e-05      0.18      19      58 ..      32      71 ..      24      75 .. 0.77
   3 ?    2.6   0.0     0.031   1.1e+02       4      30 ..      65      90 ..      62      91 .. 0.49

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.13
   PF13855.1 20 aFkglsnLkvLdLs 33
                aF +++ L+vL+  
  MMETSP1325-20131115|1167_1  2 AFANMP-LEVLNME 14
                688888.8888864 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 5.2e-05
   PF13855.1 19 gaFkglsnLkvLdLsgnnlksispeafkgLp.sLreLnLsg 58
                +++k+++ L+vL+Lsg  +++  ++ +k+Lp s++ LnL++
  MMETSP1325-20131115|1167_1 32 ESLKNCP-LQVLNLSGGFISTKFTGNIKDLPqSITDLNLEW 71
                699***9.*********997766666666653788888876 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.031
   PF13855.1  4 keLdLs.nNrlk.vipdgaFkglsnLkvL 30
                ++L+L  +++l+ +i   aF +++ L+vL
  MMETSP1325-20131115|1167_1 65 TDLNLEwCTNLEgNIQ--AFANMP-LEVL 90
                4555554334443443..666666.6666 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.041   1.4e+02       4      15 ..       8      19 ..       7      31 .. 0.85
   2 ?    4.9   0.1    0.0091        31       2      15 ..      37      50 ..      34      60 .. 0.72
   3 ?    4.6   0.1     0.011        38       2      13 ..      62      73 ..      61      84 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.041
   PF13516.1  4 LtsLdLsnNqig 15
                L++L++ ++++ 
  MMETSP1325-20131115|1167_1  8 LEVLNMEFCGFN 19
                89****999875 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0091
   PF13516.1  2 knLtsLdLsnNqig 15
                + L++L+Ls+  i+
  MMETSP1325-20131115|1167_1 37 CPLQVLNLSGGFIS 50
                569******75554 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.011
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L  + 
  MMETSP1325-20131115|1167_1 62 QSITDLNLEWCT 73
                689*****9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.57
# Mc/sec: 380.11
//
Query:       MMETSP1325-20131115|1169_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|1170_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.96
# Mc/sec: 384.42
//
Query:       MMETSP1325-20131115|1172_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.45s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 280.95
//
Query:       MMETSP1325-20131115|1171_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        46  (0.00336454); expected 273.4 (0.02)
Passed bias filter:                       45  (0.0032914); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.40s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|1174_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.30s 00:00:00.61 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|1168_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.71
# Mc/sec: 931.54
//
Query:       MMETSP1325-20131115|1175_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.61
# Mc/sec: 608.91
//
Query:       MMETSP1325-20131115|1177_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.67
# Mc/sec: 343.36
//
Query:       MMETSP1325-20131115|1178_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.1   2.8      0.076   12.5   1.3    2.2  2  PF12799.2  Leucine Rich repeats (2 copies)
      0.018   14.4   0.1          4    6.9   0.0    2.1  2  PF07873.6  YabP family
       0.13   12.3   3.0        8.9    6.6   0.2    2.8  2  PF00560.28 Leucine Rich Repeat
       0.55   10.3   6.8        6.3    7.0   0.3    2.9  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.3   2.2e-05     0.076       2      42 ..       3      43 ..       2      45 .. 0.75
   2 ?    6.9   0.2    0.0013       4.4       4      22 ..      27      45 ..      24      53 .] 0.58

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.2e-05
   PF12799.2  2 nLevLdLsnN.....nIkdlppelanLpnLktLnLsnNpis.dlsaL 42
                + + L+L+++     nIkdlp       + + LnL+n+ ++ d+++L
  MMETSP1325-20131115|1178_1  3 SITNLNLRECygiegNIKDLPQ------SITDLNLDNTYLEgDIESL 43
                6788999999888888888888......7888888888876577776 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0013
   PF12799.2  4 evLdLsnNnIk.dlppelan 22
                + L+L n+ ++ d++  l+ 
  MMETSP1325-20131115|1178_1 27 TDLNLDNTYLEgDIES-LKD 45
                4566666666555555.555 PP

>> PF07873.6  YabP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0    0.0025       8.5      46      63 ..       4      22 ..       3      23 .. 0.91
   2 ?    6.9   0.0    0.0012         4      46      63 ..      26      43 ..      25      44 .. 0.92

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0025
                --SSSS--.EEE-----EE CS
   PF07873.6 46 ikklnlee.lvieGkIksl 63
                i++lnl e   ieG+Ik l
  MMETSP1325-20131115|1178_1  4 ITNLNLREcYGIEGNIKDL 22
                99******9*******986 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0012
                --SSSS--EEE-----EE CS
   PF07873.6 46 ikklnleelvieGkIksl 63
                i+ lnl++  +eG I+sl
  MMETSP1325-20131115|1178_1 26 ITDLNLDNTYLEGDIESL 43
                899*************98 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2    0.0026       8.9       2      17 ..       4      24 ..       3      29 .. 0.75
   2 ?    6.2   0.2    0.0036        12       2      21 ..      26      45 ..      25      53 .] 0.85

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0026
                ESEEEETSS.BCB.C...HHH CS
  PF00560.28  2 LeeLdLsgN.nlt.s...lpp 17
                ++ L+L+ +  ++ +   lp 
  MMETSP1325-20131115|1178_1  4 ITNLNLRECyGIEgNikdLPQ 24
                789******999977555555 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0036
                ESEEEETSSBCB.CHHHHHHH CS
  PF00560.28  2 LeeLdLsgNnlt.slppslsn 21
                ++ L+L+++ l+ ++ + l+ 
  MMETSP1325-20131115|1178_1 26 ITDLNLDNTYLEgDIES-LKD 45
                6789*******999988.765 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.2    0.0035        12       2      13 ..       2      13 ..       1      24 [. 0.81
   2 ?    7.0   0.3    0.0018       6.3       2      17 ..      24      39 ..      22      44 .. 0.84
   3 ?   -0.4   0.0      0.46   1.6e+03       4       9 ..      48      53 .]      45      53 .] 0.78

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0035
   PF13516.1  2 knLtsLdLsnNq 13
                k++t+L+L  + 
  MMETSP1325-20131115|1178_1  2 KSITNLNLRECY 13
                799*****9995 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0018
   PF13516.1  2 knLtsLdLsnNqigde 17
                +++t+L+L n+ + ++
  MMETSP1325-20131115|1178_1 24 QSITDLNLDNTYLEGD 39
                689********99665 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.46
   PF13516.1  4 LtsLdL 9 
                +++LdL
  MMETSP1325-20131115|1178_1 48 IQTLDL 53
                789987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.68
# Mc/sec: 186.77
//
Query:       MMETSP1325-20131115|1176_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.34s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 1258.09
//
Query:       MMETSP1325-20131115|1173_1  [L=703]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-09   36.9   0.1    1.1e-08   35.0   0.1    2.1  1  PF13671.1  AAA domain
    5.6e-06   26.7   0.0    2.5e-05   24.6   0.0    2.1  2  PF13191.1  AAA ATPase domain
    1.2e-05   24.7   0.0    3.7e-05   23.1   0.0    1.9  1  PF01424.17 R3H domain
    1.2e-05   24.4   0.0    2.4e-05   23.3   0.0    1.4  1  PF01591.13 6-phosphofructo-2-kinase
    0.00054   19.1   0.0     0.0021   17.1   0.0    1.9  1  PF08433.5  Chromatin associated protein KTI12
     0.0032   18.1   0.0     0.0086   16.7   0.0    1.9  1  PF13207.1  AAA domain
  ------ inclusion threshold ------
      0.011   14.4   0.0      0.022   13.4   0.0    1.4  1  PF03308.11 ArgK protein
      0.016   15.3   0.0      0.071   13.3   0.0    2.1  1  PF13238.1  AAA domain
      0.027   14.4   0.0      0.075   13.0   0.0    1.7  1  PF13401.1  AAA domain
      0.044   13.2   0.0      0.083   12.3   0.0    1.4  1  PF05729.7  NACHT domain
      0.046   12.7   0.0       0.11   11.5   0.0    1.6  1  PF06414.7  Zeta toxin
      0.047   12.0   0.0      0.068   11.5   0.0    1.1  1  PF13166.1  AAA domain
      0.084   12.4   0.0       0.16   11.5   0.0    1.4  1  PF01583.15 Adenylylsulphate kinase
      0.088   11.6   0.0       0.15   10.8   0.0    1.3  1  PF07693.9  KAP family P-loop domain


Domain annotation for each model (and alignments):
>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.1   1.1e-11   1.1e-08       1     105 [.     220     355 ..     220     384 .. 0.61

  Alignments for each domain:
  == domain 1    score: 35.0 bits;  conditional E-value: 1.1e-11
   PF13671.1   1 lvllvGlpGsGKstlaerl...lkklg...........yvrlsqdt............lrkrlfgtdqqskt...............dytrvlkrlyqiln.klarkalsagrsvivdatnlsreerarfvklakrlgvpvrivyle 105
                 +v++ GlpGsGKstl++++   ++++              ++s+d                          +               + + +++ +++ +  +l +  + +g+ vivd+tn++r+e +++++ a + g+ + +v + 
  MMETSP1325-20131115|1173_1 220 VVVMRGLPGSGKSTLSRHIqqlCRRREspdgvdgsqedVHVVSADHffesgagqmsrkQ---R--------KglsatevyaqcfdatKVAAAHEFCREEFCiALEQVSQGNGGVVIVDNTNATRREYEWYLARAAEKGAVHVVVEIF 355
                 89*************88753333222244544445554555666666666666553331...2........1233334444444333566666678875530333333445556999******************999766666554 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   2.5e-08   2.5e-05      11     156 ..     205     344 ..     201     352 .. 0.73
   2 ?   -2.7   0.0       6.1   5.9e+03     119     156 ..     497     544 ..     437     554 .. 0.60

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 2.5e-08
   PF13191.1  11 aLlaalrrvsegsp.lllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn....lpysaiiqa...lrellrqlltelaaelggwreallaalgalipelegiiglqalvalldaalartrrpklvlvlDDlqwadresldlLealle 156
                 +L+a+l+++ +g++ +++  G +G+GKS+L r++ +  ++   r+ + ++d  +++    +       a   +++ + q ++++++ l+ ++e+ +++ +a ++++++    ++++ +l++  + +     v+++D+   ++re +  L++++e
  MMETSP1325-20131115|1173_1 205 TLKAVLESPGNGQGaVVVMRGLPGSGKSTLSRHIQQLCRR---RESPDGVDGSQEDvhvvS-------AdhfFESGAGQMSRKQRKGLS-ATEVYAQCFDATKVAAAHEFCREEFCIALEQVSQGNG---GVVIVDNTNATRREYEWYLARAAE 344
                 799*****99999999*****************4443332...233344444444423321.......244588888888888777775.7788888888889999999999999999999999999...999999877777776666665555 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 6.1
   PF13191.1 119 alldaalartr.......rpklvlvlD.D..lqwadresldlLealle 156
                 ++l +++a+++       +p + l++D D  + +  +++ +++e++++
  MMETSP1325-20131115|1173_1 497 EVLVRDAAERHyfcevatEPTFRLFFDvDmpVGRDADADASMIERIAR 544
                 444444444445555554333555555553322222222244444444 PP

>> PF01424.17  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   3.8e-08   3.7e-05      19      54 ..      39      74 ..      17      75 .. 0.82

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 3.8e-08
                T--CHHHHHHHHHHHH---EEEEE---..-EEEEE- CS
  PF01424.17 19 pmtseeRkliHelaeefgleseSeGegpkRrvvitk 54
                 +t+ eR+ +H++ae +gles+SeG   +R++ +tk
  MMETSP1325-20131115|1173_1 39 ELTPTERRDVHMFAESNGLESRSEGPKSARVLTLTK 74
                399***************************999998 PP

>> PF01591.13  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   2.5e-08   2.4e-05      12     132 ..     217     355 ..     208     361 .. 0.79

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 2.5e-08
  PF01591.13  12 sklvivlvGLpargKtyiskkltrylk..............wlgvrtkvF.n..vgkyrreavkalsdaeff.rpdneealklreklalaalkdllkylneeegqvaifDAtNttrerRklilefveennlkvlflesv 132
                 +  v+v+ GLp  gK+++s+++ +  +                 v++ +F +  +g++ r+  k ls +e++ + +++  +++ +++ ++ +   l+ +++++g v i D tN tr + ++ l+++ e++ + +++e +
  MMETSP1325-20131115|1173_1 217 QGAVVVMRGLPGSGKSTLSRHIQQLCRrrespdgvdgsqedVHVVSADHFfEsgAGQMSRKQRKGLSATEVYaQCFDATKVAAAHEFCREEFCIALEQVSQGNGGVVIVDNTNATRREYEWYLARAAEKGAVHVVVEIF 355
                 5679********************99999********9999666777666333367888888887666665414455555666666666666667777899************************99999888888865 PP

>> PF08433.5  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   2.2e-06    0.0021       3      40 ..     220     266 ..     219     391 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 2.2e-06
   PF08433.5   3 LvvltGlPssGKstvakeLakalee.........egrsvvvisdesl 40 
                  vv+ GlP sGKst+++++++  +          ++ +v+v+s + +
  MMETSP1325-20131115|1173_1 220 VVVMRGLPGSGKSTLSRHIQQLCRRrespdgvdgSQEDVHVVSADHF 266
                 599********************998888888887777777776654 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   8.9e-06    0.0086       1      35 [.     220     275 ..     220     392 .. 0.62

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 8.9e-06
                 EE--B--TT---HHHHHHHHHHS..............TEEEEEGGGB-.......- CS
   PF13207.1   1 viaitGppGsGKsTlakeLaerl..............glpvlslddll.......r 35 
                 v++  G pGsGKsTl++ + +                ++ v+s d ++        
  MMETSP1325-20131115|1173_1 220 VVVMRGLPGSGKSTLSRHIQQLCrrrespdgvdgsqeDVHVVSADHFFesgagqmS 275
                 67888*************96643555555555544446888888883234444331 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.2e-05     0.022      13      56 ..     200     245 ..     192     251 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.2e-05
                 HHHHHHHHHHGGG---..-EEE--B-------HHHHHH---HHHH- CS
  PF03308.11  13 peakellrkilpkaGr..alvvGltGvPGaGkstlveklikelrrr 56 
                  +a + l+++l++ G+    vv + G PG+Gkstl  ++ +  rrr
  MMETSP1325-20131115|1173_1 200 HDASKTLKAVLESPGNgqGAVVVMRGLPGSGKSTLSRHIQQLCRRR 245
                 4667778888877655116799************987777666665 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.3e-05     0.071       5      35 ..     225     271 ..     221     357 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 7.3e-05
   PF13238.1   5 GtpGvGKtTlakeLaerl................gdvlrdlakengl 35 
                 G pG+GK+Tl++ +++ +                ++v  d ++e+g 
  MMETSP1325-20131115|1173_1 225 GLPGSGKSTLSRHIQQLCrrrespdgvdgsqedvHVVSADHFFESGA 271
                 99************887777778888877777766666565555554 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.7e-05     0.075       7      98 ..     221     330 ..     215     352 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7.7e-05
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae......karvv....fveapast.........spkellqkllsalglpakgrltteellealqealrrrrt...rlliiDEaqr 98 
                 +v  G +G+GK+tl r++ +   ++++++       + +vv    f+e  a+          s++e++ + + a ++ a      e ++e ++ al++ ++   +++i+D+ + 
  MMETSP1325-20131115|1173_1 221 VVMRGLPGSGKSTLSRHIQQLCRRRESPDGvdgsqeDVHVVsadhFFESGAGQmsrkqrkglSATEVYAQCFDATKVAAAH----EFCREEFCIALEQVSQgngGVVIVDNTNA 330
                 566699**************8877777777999999555554444333333333444222335555555555555554444....45555555555555555555999998776 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.5e-05     0.083       2      30 ..     220     248 ..     219     252 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.5e-05
   PF05729.7   2 tvilqGeaGsGKTtLlqklasawakgklp 30 
                 +v+++G +GsGK+tL +++ ++ ++++ p
  MMETSP1325-20131115|1173_1 220 VVVMRGLPGSGKSTLSRHIQQLCRRRESP 248
                 799******************99988876 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00011      0.11      17      40 ..     219     242 ..     203     266 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00011
   PF06414.7  17 kavllgGqpGAGKtslaellleel 40 
                  +v++ G pG+GK++l++ +++  
  MMETSP1325-20131115|1173_1 219 AVVVMRGLPGSGKSTLSRHIQQLC 242
                 689****************99865 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     7e-05     0.068      26      52 ..     228     254 ..     220     296 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 7e-05
   PF13166.1  26 GsGKtTlSrllrslelkeisekysecs 52 
                 GsGK+TlSr +++l++++ s++  ++s
  MMETSP1325-20131115|1173_1 228 GSGKSTLSRHIQQLCRRRESPDGVDGS 254
                 9***************99998876554 PP

>> PF01583.15  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00016      0.16       1      38 [.     217     253 ..     217     268 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00016
                 ---EEEEE-ETT---HHHHHHHHHHHHCTS--EEEE-- CS
  PF01583.15   1 rgvvvwltGlsgsGKstiavalekkLvekgikvylLdG 38 
                 +g+vv + Gl gsGKst++ +++ +L +++ +   +dG
  MMETSP1325-20131115|1173_1 217 QGAVVVMRGLPGSGKSTLSRHIQ-QLCRRRESPDGVDG 253
                 689******************98.67777766666666 PP

>> PF07693.9  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00016      0.15       5      69 ..     203     275 ..     200     306 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00016
   PF07693.9   5 asaladvlseptlatpiviglyGkWGsGKssllnlledelkef........kpvrflfaeinpwsskggddav 69 
                 +++l  vl++p  +++ v++  G  GsGKs+l   +++  + +         +++++++ ++ + ++g  ++ 
  MMETSP1325-20131115|1173_1 203 SKTLKAVLESPGNGQGAVVVMRGLPGSGKSTLSRHIQQLCRRRespdgvdgSQEDVHVVSADHFFESGAGQMS 275
                 7899999*****************************99999999*******999*******999998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (703 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 1.15u 0.38s 00:00:01.52 Elapsed: 00:00:00.73
# Mc/sec: 2307.72
//
Query:       MMETSP1325-20131115|1180_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-10   38.6   0.3    1.8e-09   37.1   0.2    1.8  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.2   1.3e-13   1.8e-09       4      31 .]     258     285 ..     256     285 .. 0.90

  Alignments for each domain:
  == domain 1    score: 37.1 bits;  conditional E-value: 1.3e-13
                 SEEE.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21   4 gWeersddd.dGrvYYyNheTgetqWekP 31 
                  W+e++d d +G++Y+yN  +ge+ We+P
  MMETSP1325-20131115|1180_1 258 AWTECVD-DeSGHTYFYNSLSGESVWERP 285
                 4**9996.669*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.64
# Mc/sec: 1299.27
//
Query:       MMETSP1325-20131115|1182_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 255.61
//
Query:       MMETSP1325-20131115|1183_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 483.63
//
Query:       MMETSP1325-20131115|1179_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-25   88.6   0.0    3.9e-25   88.1   0.0    1.1  1  PF00620.22 RhoGAP domain


Domain annotation for each model (and alignments):
>> PF00620.22  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.1   0.0   2.8e-29   3.9e-25      14     148 ..      50     186 ..      43     190 .. 0.93

  Alignments for each domain:
  == domain 1    score: 88.1 bits;  conditional E-value: 2.8e-29
                 H-TT-TTTTSS---HHHHHHHHHHHHH----S.CCCSS-HHHHHHHHHHHHHHSSS-T.T-GGHHHHHHH..HHCCSHGGGHHHHHHHHHCTS-HHHHHHHHHHHHHHHHHHCTHHHH---HHHHHHHHHHHHCT-ST CS
  PF00620.22  14 rgldtegiyRvsgsksrvkelreafergkavdedleeedvhavasvLKrfLrelpepL.ltkelyeelle..aaksedeeerlealkellekLpkenretLryLlehLkrvaenseenkMtaenLaivfaPtLlrpks 148
                 + l++eg++Rv+g ++r  e++ a++++   d  l e+d  +va+vLK  +r+  epL +++++ye l++  aa+++++e+ +++l+++++ ++++  +   +++++L +va +s+enkM+ +nLa+vfaPt lr+ +
  MMETSP1325-20131115|1179_1  50 KRLKEEGLFRVQGAEERRIEIQAAIDADAPLD-MLGETDTLVVAQVLKATIRDSAEPLlIPDSAYEPLIRaaAAHADTPETLVSELRAVVDGFSPTYSAACGLVFRFLAKVATFSKENKMSEKNLAVVFAPTALRSTN 186
                 569****************************9.************************63799*******6456677888888***************************************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.34s 00:00:00.85 Elapsed: 00:00:00.75
# Mc/sec: 747.66
//
Query:       MMETSP1325-20131115|1186_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.3e-13   48.9   0.0    3.6e-13   48.8   0.0    1.1  1  PF02615.9 Malate/L-lactate dehydrogenase


Domain annotation for each model (and alignments):
>> PF02615.9  Malate/L-lactate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   2.6e-17   3.6e-13     188     311 ..       3     128 ..       1     152 [. 0.70

  Alignments for each domain:
  == domain 1    score: 48.8 bits;  conditional E-value: 2.6e-17
                 HHTT---STTSEEE----EES-CCTHHCCT.B-B---------HHHHHHHCHCHH--.....--HHHCHHTTSTTS---EEEEEEEE-GGGTS-HH.HHHHHHHHHHHHHHTS--STTTSS------HHH CS
   PF02615.9 188 rrkgkeipegvavdkeGklttdpevvekgrallplgghKGygLslvidilsglLsgg.....afgkqvtktanpdekrtkgqlfiaInpeklidae.efkekldelidevkssekadefeevllpGeeee 311
                 +r+gk++peg+ +dk+G++ttdp++ ++     p+gghKGygL+l  +++s+   gg     ++ +  ++ta + ek+    +f  I p+ + +ae  +++  de i  v +    +++++ ++pG   +
  MMETSP1325-20131115|1186_1   3 KREGKKLPEGACLDKDGQPTTDPAEFHAH---NPFGGHKGYGLALTTELFSA-FGGGslpsfRCNHMRKSTAVEGEKSSPNFFFQCIHPDAIGPAEfACSRSRDENIAAVVADVLGPGNDAARIPGRGRH 128
                 689************************99...9*****************94.44441111134444455554445555556777888888866653455666666666666666778888888886543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.70
# Mc/sec: 585.40
//
Query:       MMETSP1325-20131115|1187_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.25s 00:00:00.58 Elapsed: 00:00:00.81
# Mc/sec: 218.93
//
Query:       MMETSP1325-20131115|1185_1  [L=682]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   13.7   0.0        0.1   12.0   0.0    1.9  1  PF02954.14 Bacterial regulatory protein, Fis family


Domain annotation for each model (and alignments):
>> PF02954.14  Bacterial regulatory protein, Fis family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.5e-06       0.1      20      41 ..     612     633 ..     609     633 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.5e-06
                 -HHHHHHH----HHHH...HHH CS
  PF02954.14  20 nisrAArlLGisRrtLyrKLkk 41 
                 n+++A + LG+++  L  K++k
  MMETSP1325-20131115|1185_1 612 NRAKASKKLGLTPVELQEKIEK 633
                 9******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       610  (0.0446167); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.04u 0.40s 00:00:01.44 Elapsed: 00:00:00.94
# Mc/sec: 1738.63
//
Query:       MMETSP1325-20131115|1190_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.65
# Mc/sec: 129.03
//
Query:       MMETSP1325-20131115|1191_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.68
# Mc/sec: 327.74
//
Query:       MMETSP1325-20131115|1188_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-06   27.2   0.1    1.1e-05   25.6   0.0    1.8  2  PF00059.16 Lectin C-type domain


Domain annotation for each model (and alignments):
>> PF00059.16  Lectin C-type domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.24   3.2e+03      20      44 ..      52      76 ..      40      83 .. 0.77
   2 !   25.6   0.0   7.8e-10   1.1e-05       6      84 ..     125     213 ..     116     219 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.24
                S-HSSHHHHHHHHHHHCHCSSEEEE CS
  PF00059.16 20 vsiqseeeqkflkslvkksnssaWi 44
                ++      ++f++ +v +s++++++
  MMETSP1325-20131115|1188_1 52 IALYVLSGSAFITAVVAASRQYIFV 76
                5555555678999999988888887 PP

  == domain 2    score: 25.6 bits;  conditional E-value: 7.8e-10
                 HHHHHHHHHTT-E.BS-HSSHHHHHHHHHHHCH......CSSEEEESEEESSTTTCEB.TTT-B-STT.CBSTTCSTSSCC..TEEEEE CS
  PF00059.16   6 eeaekaCqkegak.Lvsiqseeeqkflkslvkk......snssaWiGlsdekkegefvwtdgssveyt.nwaegepnnkks..kedCve 84 
                 ++a+  C + + + Lv i+s++e++fl   +        + ++aWiG +d ++eg + w+  +++ +  ++ eg pn k    + +Cv+
  MMETSP1325-20131115|1188_1 125 QDANSRCYNGERGyLVNIDSQDENDFLYAKLMLrpgfqaNVHDAWIGATDMSNEGAVSWIGPKHLVNGvKFWEGGPNGKAVdgRYKCVH 213
                 67888998766666**********887655443356666999*****************999988887755555555554445778887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 980.73
//
Query:       MMETSP1325-20131115|1189_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       680  (0.0497367); expected 273.4 (0.02)
Passed bias filter:                      431  (0.0315243); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.67
# Mc/sec: 711.75
//
Query:       MMETSP1325-20131115|1194_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.1e-05   21.7   2.3    0.00016   20.8   1.6    1.4  1  PF13713.1 Transcription factor BRX N-terminal domain


Domain annotation for each model (and alignments):
>> PF13713.1  Transcription factor BRX N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   1.6   1.2e-08   0.00016       2      21 ..      29      48 ..      28      50 .. 0.95

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 1.2e-08
   PF13713.1  2 eEaakskaAKEvIKsLTaQL 21
                eE ak  aA E+I+sLTaQL
  MMETSP1325-20131115|1194_1 29 EEKAKAAAAVEAIRSLTAQL 48
                899****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       500  (0.0365711); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 268.56
//
Query:       MMETSP1325-20131115|1184_1  [L=607]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-34  118.1   1.0    3.3e-34  116.9   0.7    1.6  1  PF04366.7 Family of unknown function (DUF500)
  ------ inclusion threshold ------
      0.028   14.1   0.0      0.097   12.4   0.0    2.0  1  PF13180.1 PDZ domain


Domain annotation for each model (and alignments):
>> PF04366.7  Family of unknown function (DUF500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.9   0.7   4.8e-38   3.3e-34       2     124 ..     305     445 ..     304     447 .. 0.97

  Alignments for each domain:
  == domain 1    score: 116.9 bits;  conditional E-value: 4.8e-38
   PF04366.7   2 tglgaGfqiGveitdvVivlntkealeaftk.gklslGadlsvaagpvGrgaeadtdvsegsa................pvysysksrGlfaGvslegtvlterkdanakfYg.rkvtvkdIlkgeveappaakkLlevlk 124
                  glg+G+q+G+e+td++ivlnt++a++af++  +++lG+++ +a+gpvGr++    +vs g +                p+ysy +s+Glf+G+s+eg v++ rkd n+ fYg  kv+ +++l g v++p++a++L+ +l+
  MMETSP1325-20131115|1184_1 305 GGLGWGVQLGAELTDIMIVLNTSQAVKAFASgRQVTLGGNVGIAVGPVGRNMGGGGNVSLGDDiagkvvdgtrkqtfvvPCYSYAHSKGLFMGISMEGGVIEPRKDINSTFYGtTKVDGAQVLGGGVPPPKQAQELYYALA 445
                 689****************************99*************************9965689************************************************99**********************9986 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.4e-05     0.097       3      44 ..     128     169 ..     127     212 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.4e-05
   PF13180.1   3 iGvsvsqlentrgvlvvsVkessPaakaglkpGDiilkvdgk 44 
                 +G ++s +e++++ +v+ V+  + a+  g++pGDii ++   
  MMETSP1325-20131115|1184_1 128 LGMTLSREEPSGRPVVTRVDVHGNADTLGVRPGDIISEIRSD 169
                 7999********************************998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.97u 0.40s 00:00:01.37 Elapsed: 00:00:00.84
# Mc/sec: 1731.65
//
Query:       MMETSP1325-20131115|1195_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.68
# Mc/sec: 362.98
//
Query:       MMETSP1325-20131115|1197_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-12   44.8   0.0    4.3e-12   44.8   0.0    2.6  3  PF05327.6 RNA polymerase I specific transcription initiation factor RRN3


Domain annotation for each model (and alignments):
>> PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   3.1e-16   4.3e-12     467     563 ..       2      86 ..       1      88 [. 0.86
   2 ?   -3.5   3.5      0.13   1.7e+03     247     267 ..      90     110 ..      85     130 .. 0.43
   3 ?   -0.8   0.3      0.02   2.8e+02     234     283 ..     191     241 ..     183     242 .] 0.77

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 3.1e-16
   PF05327.6 467 PLkvCspsVvseFakiarhlnlvycysiiEankrerlsrvagkasrsaesnresesavssektkqdLdayFPFDPylLkkskklieplYvewsevae 563
                 PL +C++ V  eF+++ + l+l+   ++   n+   +++  g++                 ++ ++Ld++FPFDPylL+ s  ++ep+Y+ w++++ 
  MMETSP1325-20131115|1197_1   2 PLTYCLERVRVEFLQLCHLLRLLPPATLATLNATLLMRNGSGRQRG------------RRAANVNPLDSFFPFDPYLLRHSYPFVEPFYNDWEPLPD 86 
                 ***************************9999999777777666433............23344568**************************99865 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 0.13
   PF05327.6 247 dlddddseeesvesedeedee 267
                 + d++ +++e++++ede+++e
  MMETSP1325-20131115|1197_1  90 TEDETRDADETSDEEDEDEQE 110
                 222222233233333322222 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.02
   PF05327.6 234 laeee.eeeeeelfdlddddseeesvesedeedeeakstkkikelsekLDa 283
                  ++ e ++++++l d+d  d+  +  e++d  +  a ++++ +++ e+LDa
  MMETSP1325-20131115|1197_1 191 HHNAEyQHDDDGLHDDDGLDDGMIPDEEMDGAEVGALHSRRKDSIGETLDA 241
                 344444788899999999998888888888888889999999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       476  (0.0348157); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.70
# Mc/sec: 828.45
//
Query:       MMETSP1325-20131115|1196_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-25   87.7   0.5    1.3e-24   87.2   0.4    1.1  1  PF12697.2  Alpha/beta hydrolase family
    3.7e-16   59.2   0.0    9.3e-16   57.9   0.0    1.6  1  PF00561.15 alpha/beta hydrolase fold
    8.5e-11   41.6   0.0    2.2e-10   40.3   0.0    1.7  1  PF12695.2  Alpha/beta hydrolase family
    0.00019   20.8   0.0    0.00033   20.0   0.0    1.4  1  PF00756.15 Putative esterase
    0.00026   20.0   0.0    0.00043   19.3   0.0    1.3  1  PF06028.6  Alpha/beta hydrolase of unknown function (DUF915)
    0.00043   18.7   0.0     0.0008   17.8   0.0    1.4  1  PF03096.9  Ndr family
     0.0016   17.9   0.0     0.0036   16.8   0.0    1.6  2  PF06821.8  Serine hydrolase
     0.0018   17.7   0.0      0.038   13.4   0.0    2.1  2  PF07859.8  alpha/beta hydrolase fold
     0.0069   16.0   0.0        1.3    8.6   0.0    2.1  2  PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
     0.0097   16.0   0.0      0.028   14.5   0.0    1.8  2  PF00975.15 Thioesterase domain
  ------ inclusion threshold ------
      0.029   13.8   0.0       0.07   12.5   0.0    1.6  2  PF07819.8  PGAP1-like protein
       0.11   11.8   0.0       0.15   11.3   0.0    1.4  1  PF10230.4  Uncharacterised conserved protein (DUF2305)


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.4   1.1e-27   1.3e-24      52     227 ..      17     238 ..       3     239 .. 0.66

  Alignments for each domain:
  == domain 1    score: 87.2 bits;  conditional E-value: 1.1e-27
                 HHHHHHHHHHH--.--EEEE--------HHHHHH----.EEEEEEE------STT..........................---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH...........--GGGG....GG...............------HHHHTT-..-S-EEEEE-----HHHHHHHHHHHHHSTT........EEEEE---SSSS-...-HHHHHH CS
   PF12697.2  52 laadlaalldalglrpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpas..........................alrpagpsllrrllagraaalrdlaarafarlfdgdelealvra...........daaalaellraa...............lldadlrealarl..dvPvlviageaDrvvppeearrlaealpg........arvvvlpgagHllfleapdevae 227
                 +a+ ++++ ++lgl++ +lvGHS+G+++a ++a+++p++v++lvl +p+g  +++                          +                a    ++a+r f+ ++ ++  + +v++            a+ ++++++++               ++ ++l +++++l  ++P+++i+g++D++   + arr++++l +        +r  +l+ agH l++++pd++++
  MMETSP1325-20131115|1196_1  17 FADSFEQWRAQLGLDRMHLVGHSMGAIIAVRYAEKYPEHVSSLVLASPAGVPHPPsetfqdrvnaqplslrreifrtvgnaW---------------DAGYTPQYASRLFGGWLGRSMIQGYVNRrfhesvtnkpeFAEYMYQHWQGQasgelalqamlspgaFAKRPLIDRIPNLepSIPITFIYGDRDWMD-IRPARRIKRRLAQdtksadrvVRCFELEEAGHQLMIDQPDAFND 238
                 58899*********************************************76666777777555444443333333333331...............3333333334444444444444444433344444423333333333333336666777777777776777777888888888***********985.5566666666655455566666889****************987 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   8.2e-19   9.3e-16      28     228 ..      15     240 ..       8     242 .. 0.80

  Alignments for each domain:
  == domain 1    score: 57.9 bits;  conditional E-value: 8.2e-19
                 HHHHHHHHHHHHHSTSSSEEEEE-B---HHHHHHHHHCGGGEEEEEEESB--.........HHSHCSHSTTCHC......HHHHHHHHCCHHHHHHHHHHHCSCCCHHH...CHHHHHHCHCCCCCHHH.....HHHHHHT.ECCHCCHCCECHCHHHHHHHHHCCHHHT..-TSSEEEEECCTTS..CCHHCHHHH.HHHCSTT....EEEEEETTHHCSHHHHSCHHHHHHH CS
  PF00561.15  28 ddlardleavldalglkkltlvGhSmGGmialayaaeypdrvkamvllgtva.........vlsdglssdvlnr......gstltlladnvagrlskgikplqgdasvq...aqsllrpqvtdflkrfd.....ansyare.getraldgkllaalgrdlvwdvtetlkt..ilvptlvisgtdDp..lvpykasek.laelipk....sqlvvidgpgHlafldkpdeinkli 228
                 d +a   e+++++lgl++ +lvGhSmG+ ia  ya++yp++v+++vl +++          +      ++v ++      + ++t  +++ ag +    + l+g + +    + +++r ++++  + ++     ++ ++ + +   al+++l    g +++ +++  + +    +p+  i+g+ D+  + p   + + la+ + +    +++++++ +gH +++d pd++n ++
  MMETSP1325-20131115|1196_1  15 DFFADSFEQWRAQLGLDRMHLVGHSMGAIIAVRYAEKYPEHVSSLVLASPAGvphppsetfQ------DRVNAQplslrrEIFRTVGNAWDAGYTPQYASRLFGGWLGRsmiQGYVNRRFHESVTNKPEfaeymYQHWQGQaSGELALQAMLS--PGAFAKRPLIDRIPNlePSIPITFIYGDRDWmdIRPARRIKRrLAQDTKSadrvVRCFELEEAGHQLMIDQPDAFNDIV 240
                 6689999*******************************************88***5555553......4444444555558888888888888777777777777777677766777777777777766655554444444455677777777..8888888888888888889************9999**999999999999989988********************9876 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.0     2e-13   2.2e-10      47     141 ..      14     226 ..       2     227 .. 0.82

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 2e-13
   PF12695.2  47 krvl......aadlldleriilvGhSlGGgvalelagrd.drvkglvllap....fpdgedla.kltl....................................................................................................pvllihGtrDgvv..ppeeaek.lakalpgdael...vviegasH 141
                 +++       ++++l+l+r++lvGhS+G+ +a+++a+++ ++v++lvl +p    +p +e+++ ++++                                                                                                    p+ +i+G+rD +   p+  +++ la+  +++ ++   +++e a+H
  MMETSP1325-20131115|1196_1  14 EDFFadsfeqWRAQLGLDRMHLVGHSMGAIIAVRYAEKYpEHVSSLVLASPagvpHPPSETFQdRVNAqplslrreifrtvgnawdagytpqyasrlfggwlgrsmiqgyvnrrfhesvtnkpefaeymyqhwqgqasgelalqamlspgafakrplidripnlepsiPITFIYGDRDWMDirPARRIKRrLAQDTKSADRVvrcFELEEAGH 226
                 44443444443445699**********************************8887788888873344477799*********************************************************************************************************99876655554413333333333344477777777 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.9e-07   0.00033     117     154 ..      33      66 ..      20     110 .. 0.81

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.9e-07
                 EEEE--THHHHHHHHHHHH-TTT-SEEEEES----TTC CS
  PF00756.15 117 ravaGqSmGGlgALilalkhpdrFgsvssfSpivnpsn 154
                 + ++G+SmG+ +A+ +a k+p++ +s    Sp      
  MMETSP1325-20131115|1196_1  33 MHLVGHSMGAIIAVRYAEKYPEHVSSLVLASPA----G 66 
                 679************************999986....3 PP

>> PF06028.6  Alpha/beta hydrolase of unknown function (DUF915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.8e-07   0.00043      99     126 ..      27      54 ..      10      59 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 3.8e-07
   PF06028.6  99 kYnikkvnlvGhSmGglaltsYledyan 126
                 + +++++ lvGhSmG++ +++Y+e+y +
  MMETSP1325-20131115|1196_1  27 QLGLDRMHLVGHSMGAIIAVRYAEKYPE 54 
                 66789********************965 PP

>> PF03096.9  Ndr family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0     7e-07    0.0008      87     150 ..      19      82 ..      12      93 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 7e-07
   PF03096.9  87 dqllavldhfklksviglGvgaGAyilarfalkhperveglvLinitskaagwvewakeKlssk 150
                 d  ++   ++ l+ +  +G   GA i +r+a k+pe v++lvL ++ +  +   e ++++++++
  MMETSP1325-20131115|1196_1  19 DSFEQWRAQLGLDRMHLVGHSMGAIIAVRYAEKYPEHVSSLVLASPAGVPHPPSETFQDRVNAQ 82 
                 555566677888999999***************************9998888888888877755 PP

>> PF06821.8  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.1e-06    0.0036      56     110 ..      32      81 ..      17     115 .. 0.76
   2 ?   -3.6   0.0       5.8   6.6e+03      13      20 ..     144     151 ..     139     158 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.1e-06
                 TEEEEEE----HHHHHHHH---SS-E--EEEE----..S--TT-GGGGGGT---- CS
   PF06821.8  56 kvvlvAHSlgclavlhaaelqsrakvagalLVApadveeeaaalkklaefaplpr 110
                 ++ lv HS+g+++++++a  + +++v++ +L +pa v +    +++ +  +++++
  MMETSP1325-20131115|1196_1  32 RMHLVGHSMGAIIAVRYA-EKYPEHVSSLVLASPAGVPH----PPSETFQDRVNA 81 
                 5789**************.99**************9952....222222233333 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 5.8
                 STTHHHHH CS
   PF06821.8  13 eHWqswle 20 
                 +HWq + +
  MMETSP1325-20131115|1196_1 144 QHWQGQAS 151
                 79997655 PP

>> PF07859.8  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   3.4e-05     0.038      56     139 ..      17      93 ..       4     121 .. 0.70
   2 ?    2.1   0.0     0.094   1.1e+02     138     209 ..     153     228 ..     129     230 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.4e-05
                 HHHHHHTTTTHTCCCCEEEEE-------HHHHHHHHHHH-----EEEEEEES----TS-CHHHHHH.THHCTSTTS.S-HHHHHH CS
   PF07859.8  56 lrwlaeqawelgadpsrivvaGdSaGGnLaaavalrardegepeiaaqvliyPgtdlertesesqelaeeladgpl.ltrdamdl 139
                 ++  +eq w++++  +r+ ++G S G+ +a   a +  ++    ++ +vl +P+     + se++  +++++ +pl l r+ ++ 
  MMETSP1325-20131115|1196_1  17 FADSFEQ-WRAQLGLDRMHLVGHSMGAIIAVRYAEKYPEH----VSSLVLASPAGVP-HPPSETF--QDRVNAQPLsLRREIFRT 93 
                 4444566.88899999******************999996....9********5533.4444555..344544455455555444 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.094
                 HHHHHHHS.SGGGGGSTTTSGGGSS-HTT---EEEEEEEE-TT.....S----HHHHHHHH----EEEEEEE-EE--T CS
   PF07859.8 138 dlfwrlyl.peadrddplaspllasdlsglpptlvvvaelDpl.....rdegeayaerlraagvevelveyegmvHgf 209
                 +l+ +++l p+a +++pl+  +   +l+   p+  + + +D++     r+ ++++a+  ++a   v++ e e++ H+ 
  MMETSP1325-20131115|1196_1 153 ELALQAMLsPGAFAKRPLIDRI--PNLEPSIPITFIYGDRDWMdirpaRRIKRRLAQDTKSADRVVRCFELEEAGHQL 228
                 4555666634666777777766..357777788888888888743333455566666667788899999999999975 PP

>> PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0011       1.3      22      76 ..      31      85 ..      17     105 .. 0.83
   2 ?    5.4   0.0     0.011        12     125     195 ..     188     261 ..     171     271 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0011
                -----B------HHHHHHHHHSS.S---EEEE----------EEETTE..EE---- CS
   PF08840.6 22 dkigllGiSkGgelalllasflk.kisavvlingsavvvegkllykeeskvlpelk 76
                d++ l+G+S G+ +a+  a +++ ++s +vl +++ v +   + ++++    ++l+
  MMETSP1325-20131115|1196_1 31 DRMHLVGHSMGAIIAVRYAEKYPeHVSSLVLASPAGVPHPPSETFQDR-VNAQPLS 85
                7899*******************9***********9999888888877.4445554 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.011
                 --SSS-HHHHHHHHHHHHHH----.--EEEE-..--------STT----.-EEEETTTTEEEE----HHHHHHH CS
   PF08840.6 125 dDknwpSkesaekaserLkkagkkvevqlltY..pkaGHliepPyfplc.raslaklvgekvlyGGetkahakA 195
                  D+ w     a+ +++rL++  k+    + ++  ++aGH +  +    +  ++l+++++ +v+ G e+++ +++
  MMETSP1325-20131115|1196_1 188 GDRDWMDIRPARRIKRRLAQDTKSADRVVRCFelEEAGHQLMIDQPDAFnDIVLKSIHDDEVAGGMEPHKFEYS 261
                 466788888899**********99988888884469***88766544330344555666667777777777666 PP

>> PF00975.15  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   2.5e-05     0.028      52      88 ..      17      53 ..      10     100 .. 0.79
   2 ?   -1.5   0.0       1.9   2.1e+03      15      43 ..     142     169 ..     139     218 .. 0.70

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 2.5e-05
                HHHHHHHHHHH--S-SEEEE------HHHHHHHHHHH CS
  PF00975.15 52 aeeyaealrqiqpegPyaLfGySlGGllAfevArqLe 88
                 ++ +e+ r++   +  +L+G+S+G+++A   A++  
  MMETSP1325-20131115|1196_1 17 FADSFEQWRAQLGLDRMHLVGHSMGAIIAVRYAEKYP 53
                56667777888888889************99998765 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1.9
                 CCHHHHHHHSSSEEEEEECCSTTC----T CS
  PF00975.15  15 vyrklarklpdplveflaiqlpgrerdep 43 
                 +y++++ + +++  ++ a+ +pg   + p
  MMETSP1325-20131115|1196_1 142 MYQHWQGQASGE-LALQAMLSPGAFAKRP 169
                 677777777774.6666666666633333 PP

>> PF07819.8  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.2e-05      0.07      85     127 ..      31      69 ..      21      93 .. 0.73
   2 ?   -2.8   0.0         3   3.4e+03       5      35 ..     181     213 ..     180     223 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.2e-05
   PF07819.8  85 tsviliGHSmGGlVArsaltlpnyikdsvntivtlasPhalpp 127
                 ++  l+GHSmG ++A     ++++ +++v+ + +lasP   p 
  MMETSP1325-20131115|1196_1  31 DRMHLVGHSMGAIIAV---RYAEKYPEHVSSL-VLASPAGVPH 69 
                 56789******99984...4455566778776.4788876665 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 3
   PF07819.8   5 ipVlfipG..nagsykqvRsiaseakrkalane 35 
                 ip+ fi G  +  +++  R i +++ +++ + +
  MMETSP1325-20131115|1196_1 181 IPITFIYGdrDWMDIRPARRIKRRLAQDTKSAD 213
                 688999994444566688888888877766554 PP

>> PF10230.4  Uncharacterised conserved protein (DUF2305)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00013      0.15      85     117 ..      32      61 ..      11     136 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00013
   PF10230.4  85 klilvgHSvGaYialevlkrlseakfrikkvvl 117
                 +++lvgHS+Ga ia++ +++++    +++++vl
  MMETSP1325-20131115|1196_1  32 RMHLVGHSMGAIIAVRYAEKYP---EHVSSLVL 61 
                 689***************9999...55665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.79
# Mc/sec: 867.54
//
Query:       MMETSP1325-20131115|1201_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.039   14.1   4.9      0.039   14.1   3.4    2.3  3  PF05522.6  Metallothionein
      0.067   13.0   1.2      0.067   13.0   0.8    2.3  2  PF01607.19 Chitin binding Peritrophin-A domain
        2.5    7.9  16.8       0.17   11.7   3.9    3.1  2  PF00053.19 Laminin EGF-like (Domains III and V)
        9.5    4.6   7.2        9.9    4.6   2.5    2.0  2  PF09402.5  Man1-Src1p-C-terminal domain


Domain annotation for each model (and alignments):
>> PF05522.6  Metallothionein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.83   2.8e+03      36      39 ..       8      11 ..       2      17 .. 0.52
   2 ?   -2.0   0.4       1.2   4.1e+03       6      10 ..      35      39 ..      29      46 .. 0.49
   3 ?   14.1   3.4   1.1e-05     0.039      22      62 ..      70     114 ..      65     117 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.83
                ---X CS
   PF05522.6 36 CakC 39
                Ca+C
  MMETSP1325-20131115|1201_1  8 CATC 11
                3333 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.2
                HHHH- CS
   PF05522.6  6 vCcre 10
                +C+ +
  MMETSP1325-20131115|1201_1 35 ACPED 39
                23333 PP

  == domain 3    score: 14.1 bits;  conditional E-value: 1.1e-05
                 TT----S---..-----XXXXXXXXXXXXXXXXX....XXXXXXX CS
   PF05522.6  22 ClkgeClkegkklCCakCsnaaCkCaaaCkCaag....sgCkkGn 62 
                 C++++C  e+++ C +   na+C    +Ck +a+     +Ck+G 
  MMETSP1325-20131115|1201_1  70 CIRNTCDAEVRSACWTLPLNASCGLDVSCKSGATgplcGSCKTGY 114
                 ******************************999889966799885 PP

>> PF01607.19  Chitin binding Peritrophin-A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.96   3.3e+03      42      53 .]      73      83 ..      71      83 .. 0.73
   2 ?   13.0   0.8   1.9e-05     0.067      13      45 ..      90     124 ..      84     126 .] 0.84

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.96
  PF01607.19 42 qtCdypanvveC 53
                +tCd +   + C
  MMETSP1325-20131115|1201_1 73 NTCDAEVR-SAC 83
                68998876.776 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.9e-05
  PF01607.19  13 kdCskyyqCsngkpv..ektCpeglvFneetqtCd 45 
                  +C   + C +g +    ++C+ g +F+  +qtC+
  MMETSP1325-20131115|1201_1  90 ASCGLDVSCKSGATGplCGSCKTGYAFDSLKQTCE 124
                 567677889999888889****************7 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   1.5     0.067   2.3e+02      29      43 ..       6      20 ..       3      36 .. 0.81
   2 ?   11.7   3.9     5e-05      0.17      21      49 .]      97     123 ..      70     123 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.067
                --S-EE----B-TTT CS
  PF00053.19 29 rkCdrCkpgyyglps 43
                ++C  C  +y+++p+
  MMETSP1325-20131115|1201_1  6 STCATCITNYHRDPT 20
                57********99987 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 5e-05
                 SBSTTEE---S-EE----B-TTTTGGGSS CS
  PF00053.19  21 lCkenveGrkCdrCkpgyyglpsdsgegC 49 
                 +Ck + +G+ C  Ck gy  +  + +++C
  MMETSP1325-20131115|1201_1  97 SCKSGATGPLCGSCKTGYAFD--SLKQTC 123
                 6*****************876..444455 PP

>> PF09402.5  Man1-Src1p-C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   2.5    0.0029       9.9      51      64 ..      32      45 ..       5      79 .. 0.74
   2 ?    1.7   0.1     0.022        74      47      72 ..      78     101 ..      73     105 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0029
   PF09402.5 51 aCtpCPenAiCysg 64
                aC++CPe++iC  +
  MMETSP1325-20131115|1201_1 32 ACRACPEDGICDGH 45
                7**********765 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.022
   PF09402.5  47 elkPaCtpCPenAiCysglklkCkpg 72 
                 e++ aC + P nA C     ++Ck+g
  MMETSP1325-20131115|1201_1  78 EVRSACWTLPLNASCGLD--VSCKSG 101
                 56668**********877..999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       400  (0.0292569); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.61
# Mc/sec: 494.99
//
Query:       MMETSP1325-20131115|1198_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.62
# Mc/sec: 305.34
//
Query:       MMETSP1325-20131115|1202_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 603.22
//
Query:       MMETSP1325-20131115|1203_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-09   36.5   1.9    2.8e-09   36.1   1.3    1.1  1  PF11779.3 Protein of unknown function (DUF3317)


Domain annotation for each model (and alignments):
>> PF11779.3  Protein of unknown function (DUF3317)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   1.3     2e-13   2.8e-09       6      48 ..      38      80 ..      34      85 .. 0.86

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 2e-13
   PF11779.3  6 lsrkyylYeVtfglYmLdpwEkflfnilllillalilyavyly 48
                +s++y++ e+ +g+Ym+d+wEk ++n++ + + a + y+++ y
  MMETSP1325-20131115|1203_1 38 FSLWYLRWELWTGIYMMDWWEKWFCNSVAVAVWAGTAYYGSKY 80
                79**************************988877777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 545.63
//
Query:       MMETSP1325-20131115|1200_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      455  (0.0332797); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 433.03
//
Query:       MMETSP1325-20131115|1205_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00093   19.1   8.5     0.0017   18.3   5.9    1.4  1  PF07974.8  EGF-like domain
     0.0019   18.0   3.6     0.0038   17.0   2.5    1.6  1  PF00008.22 EGF-like domain
  ------ inclusion threshold ------
      0.028   14.3   5.6      0.059   13.3   3.9    1.5  1  PF01683.13 EB module


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   5.9   3.7e-07    0.0017       7      32 .]     139     162 ..     130     162 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3.7e-07
   PF07974.8   7 iCgghGtCvkqcgkCvCdsgyqGktC 32 
                 +C+++G+C    g+C+C++gy  ++C
  MMETSP1325-20131115|1205_1 139 QCSNRGSCI--EGTCECYKGYNKDDC 162
                 6********..9*********99999 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   2.5   8.3e-07    0.0038       5      29 ..     139     158 ..     133     161 .. 0.92

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 8.3e-07
                 TCSS--EEEEECCTEEEEE--TTCT CS
  PF00008.22   5 pCsngGtCvdtpgggytCeCpeGyt 29 
                  Csn+G C+++     tCeC +Gy+
  MMETSP1325-20131115|1205_1 139 QCSNRGSCIEG-----TCECYKGYN 158
                 6**********.....9******97 PP

>> PF01683.13  EB module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   3.9   1.3e-05     0.059      26      48 ..     138     160 ..     134     163 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.3e-05
  PF01683.13  26 eqCqggsvCsagtCqCpegkter 48 
                  qC++  +C++gtC+C +g++++
  MMETSP1325-20131115|1205_1 138 SQCSNRGSCIEGTCECYKGYNKD 160
                 69*****************8876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.61
# Mc/sec: 667.84
//
Query:       MMETSP1325-20131115|1199_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-21   74.5   0.8    4.7e-21   74.1   0.5    1.1  1  PF00111.22 2Fe-2S iron-sulfur cluster binding domain
  ------ inclusion threshold ------
      0.066   13.2   1.7       0.14   12.1   1.2    1.7  1  PF12587.3  Protein of unknown function (DUF3761)


Domain annotation for each model (and alignments):
>> PF00111.22  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.5   6.9e-25   4.7e-21       3      78 .]      39     111 ..      37     111 .. 0.93

  Alignments for each domain:
  == domain 1    score: 74.1 bits;  conditional E-value: 6.9e-25
                 ESS-EEEEEEEETTCBHHHHHHHT-TTTGTTSS----SSTTEEEEEEHCE.HCCTTHHHHHHHTTSSEEECCCSBGG CS
  PF00111.22   3 idgkevevevadgettlldaaeenggidipysCggggCgtClvevnegev.qsdetelegeeldegklrlaCqtivt 78 
                 +dg+ ve+e+ad+++ +ldaaee  gid+pysC++g+C+tC+ +v++g+   s++++l++++l++g+  l+C++++t
  MMETSP1325-20131115|1199_1  39 PDGT-VEIECADDTY-ILDAAEEE-GIDLPYSCRAGACSTCAGKVEAGSLdNSEQSFLDDDQLADGFT-LTCVAYPT 111
                 5666.*****99999.******99.*************************6666*************9.*****997 PP

>> PF12587.3  Protein of unknown function (DUF3761)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.2     2e-05      0.14       8      74 ..       4      68 ..       1      84 [. 0.73

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2e-05
   PF12587.3  8 allaalallsapafAqtasaatdeadLdrhdtyvnrdgetvhaParsksGsapegatarCrDGsysf 74
                ++++ala+ s +afA  ++a+t  + L+ + t  n dg+     a   +    ++a     D  ys 
  MMETSP1325-20131115|1199_1  4 LVVLALATASVSAFAPMTTAWTRTSALNYKVTLNNPDGTVEIECA--DDTYILDAAEEEGIDLPYSC 68
                567777999*****************************8666555..45555666666655555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 525.52
//
Query:       MMETSP1325-20131115|1207_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.083   12.3   6.1       0.12   11.8   4.3    1.2  1  PF01391.13 Collagen triple helix repeat (20 copies)
        3.8    7.4  12.5        1.2    9.0   6.4    1.7  2  PF12316.3  Segment polarity protein dishevelled (Dsh) C terminal


Domain annotation for each model (and alignments):
>> PF01391.13  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   4.3   1.8e-05      0.12      10      26 ..     109     125 ..      96     138 .. 0.40

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.8e-05
  PF01391.13  10 GppGppGkrGepGeaGe 26 
                 G++G++G++G++G++G+
  MMETSP1325-20131115|1207_1 109 GSAGSRGSQGSRGSQGS 125
                 11111111111111111 PP

>> PF12316.3  Segment polarity protein dishevelled (Dsh) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.21   1.5e+03     113     117 ..      36      40 ..       7      79 .. 0.51
   2 ?    9.0   6.4   0.00018       1.2      55      94 ..     100     139 ..      92     146 .] 0.76

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.21
   PF12316.3 113 sslsr 117
                 +++ +
  MMETSP1325-20131115|1207_1  36 ANMAS 40 
                 11111 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00018
   PF12316.3  55 sdlsysygsGsagsqhseGsrssgsnrsdgeakrakqere 94 
                 ++++     Gsags+ s Gsr+s+ +r++g+ k a  +  
  MMETSP1325-20131115|1207_1 100 EGPGSARSVGSAGSRGSQGSRGSQGSRAKGSPKAARAPSP 139
                 566777789******************9998776655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1083  (0.079213); expected 273.4 (0.02)
Passed bias filter:                      548  (0.0400819); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.45s 00:00:00.88 Elapsed: 00:00:00.68
# Mc/sec: 514.51
//
Query:       MMETSP1325-20131115|1208_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.44s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 440.76
//
Query:       MMETSP1325-20131115|1211_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-08   32.2   0.0    1.1e-07   31.6   0.0    1.3  1  PF02146.12 Sir2 family


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   8.1e-12   1.1e-07     142     181 .]       3      43 ..       1      43 [. 0.95

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 8.1e-12
                 EEESS--B-----HHHHHHHH.HHHH-SEEEE----S-STT CS
  PF02146.12 142 lkpdvvfFGealpeklkklle.kveeadlllviGtSlkVap 181
                 +kp+ v+FG +lp+ +++l + ++ ++dll++ GtSl V p
  MMETSP1325-20131115|1211_1   3 VKPTTVLFGASLPDDFFTLSKqDLPKCDLLIIAGTSLVVSP 43 
                 8************999999999*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 499.93
//
Query:       MMETSP1325-20131115|1212_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0011   18.5   0.0     0.0017   17.9   0.0    1.2  1  PF09409.5 PUB domain


Domain annotation for each model (and alignments):
>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.2e-07    0.0017      25      58 ..      24      57 ..      21      65 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.2e-07
   PF09409.5 25 neekyRrirlsNktfkekilsvegavelLellGF 58
                 +eky+++r  N+ f  ki s++g+v l+ +l F
  MMETSP1325-20131115|1212_1 24 CDEKYKKVRVGNPIFNGKIGSLNGGVGLMGALTF 57
                69************************99988877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.69
# Mc/sec: 548.73
//
Query:       MMETSP1325-20131115|1213_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 143.78
//
Query:       MMETSP1325-20131115|1214_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1282  (0.0937683); expected 273.4 (0.02)
Passed bias filter:                      677  (0.0495173); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.63
# Mc/sec: 483.08
//
Query:       MMETSP1325-20131115|1215_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.76    8.5   4.7       0.93    8.2   3.3    1.2  1  PF10149.4 Transmembrane protein 231


Domain annotation for each model (and alignments):
>> PF10149.4  Transmembrane protein 231
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.3   6.8e-05      0.93     161     194 ..      33      65 ..      18      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 6.8e-05
   PF10149.4 161 alqkslppaarlasgrislkGdlrlkQsvalkcp 194
                 ++q+++pp+++ ++g+i+ +G+ +l+Q +++++p
  MMETSP1325-20131115|1215_1  33 VIQHKQPPQQQSQQGQIQAQGQQHLQQ-IQMQQP 65 
                 47888888*******************.999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       894  (0.0653891); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.76
# Mc/sec: 220.72
//
Query:       MMETSP1325-20131115|1216_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-19   68.1  16.9    1.4e-18   66.7  11.7    1.6  1  PF01529.15 DHHC palmitoyltransferase
  ------ inclusion threshold ------
       0.51    9.8   3.7        0.7    9.4   2.5    1.1  1  PF00060.21 Ligand-gated ion channel


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7  11.7     2e-22   1.4e-18      60     172 ..       2     103 ..       1     105 [. 0.78

  Alignments for each domain:
  == domain 1    score: 66.7 bits;  conditional E-value: 2e-22
  PF01529.15  60 prshHCriCnkCvlkfDhHCpwvnncIGarNhkyFllfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllfllafhlylilrnmTtieele 172
                  rs+HCr+C+kCv  fDhHCp+++nc+G+ N+++F+ + +++++++ +  ++ ++++ +   + +           ++++ ++ + +++f ++l  +h+ l ++n+Tt+e+++
  MMETSP1325-20131115|1216_1   2 LRSKHCRTCRKCVSLFDHHCPYIGNCVGRDNYRWFFGYAFMFFVCSSLWEITAIIYLQKVDFDYS-----------VLTVALYFFPFWCFSIMLSSYHANLSFTNLTTNEQMN 103
                 59********************************9766665555555555544444444322211...........26677788899************************97 PP

>> PF00060.21  Ligand-gated ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.5    0.0001       0.7      43      93 ..      43      92 ..      30     107 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0001
                HHHHHHHHHHXXXTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00060.21 43 ftlsnslwfvlgalvqqgcdesprsvsgRilvavwwffvlillssYtAnLa 93
                f + +slw ++++++ q  d     ++  +  + +w f++ +lssY AnL 
  MMETSP1325-20131115|1216_1 43 FFVCSSLWEITAIIYLQKVDFDYSVLTVALYFFPFWCFSI-MLSSYHANLS 92
                66889*******************9999999999999995.679*****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       638  (0.0466647); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 742.40
//
Query:       MMETSP1325-20131115|1218_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.099   12.8   1.4      0.099   12.8   1.0    1.8  2  PF08232.7 Striatin family


Domain annotation for each model (and alignments):
>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1     0.034   4.6e+02      99     121 ..       7      29 ..       2      40 .. 0.61
   2 ?   12.8   1.0   7.3e-06     0.099      16      42 ..      41      67 ..      37      68 .] 0.92

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.034
   PF08232.7  99 eesessakdekelkksreylkks 121
                  +s +s +d++ ++++r ++ k+
  MMETSP1325-20131115|1218_1   7 GNSGDSGSDQSARARERAQVVKN 29 
                 45556666666666666665554 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 7.3e-06
   PF08232.7 16 lErdrnaweiEraEmkarIakLeGerr 42
                +Er r +we+E+  +  ++  L  ++r
  MMETSP1325-20131115|1218_1 41 HERARQEWELEKEGLVLQVDTLRRQAR 67
                9********************999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.60
# Mc/sec: 271.59
//
Query:       MMETSP1325-20131115|1217_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   13.2   5.1      0.024   13.0   3.5    1.1  1  PF13148.1  Protein of unknown function (DUF3987)
      0.031   14.7   1.8      0.039   14.4   1.2    1.3  1  PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
      0.061   12.9   1.8      0.068   12.8   1.3    1.2  1  PF08496.5  Peptidase family S49 N-terminal
      0.076   12.3   4.3      0.096   12.0   3.0    1.4  1  PF11861.3  Domain of unknown function (DUF3381)
      0.098   12.0   9.8       0.15   11.4   6.8    1.3  1  PF06658.7  Protein of unknown function (DUF1168)
       0.17   11.8   8.6        0.1   12.6   3.7    1.8  2  PF12235.3  Fragile X-related 1 protein C terminal
       0.21   10.1   4.5       0.24    9.9   3.1    1.1  1  PF12569.3  NMDA receptor-regulated protein 1
       0.65    9.2   3.0       0.89    8.7   2.1    1.1  1  PF01163.17 RIO1 family
        2.7    6.1   7.7        3.1    5.9   5.4    1.1  1  PF04006.7  Mpp10 protein


Domain annotation for each model (and alignments):
>> PF13148.1  Protein of unknown function (DUF3987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.5   1.6e-05     0.024      64     106 ..      63     102 ..      59     129 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.6e-05
   PF13148.1  64 eeieeelreeyeeelkeykaekeiweaekkglekkakkaakkg 106
                 eeie+e r++ +e++k++k++    ++e+k+l+k+ak+aakk+
  MMETSP1325-20131115|1217_1  63 EEIENERRRQKRERRKAAKRAA---KKEAKALKKAAKRAAKKE 102
                 5666666666666666666555...999999999999888876 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.2   2.6e-05     0.039      29      73 ..      58     102 ..      29     116 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.6e-05
   PF11942.3  29 aefieeaeddrrhreldrrrekeeeedaeelaevl.klekrYgdet 73 
                 + fi+e e + ++r+++r+r+k +++ a++ a++l k +kr ++++
  MMETSP1325-20131115|1217_1  58 DHFIAE-EIENERRRQKRERRKAAKRAAKKEAKALkKAAKRAAKKE 102
                 456666.45566677789999999999********88888886653 PP

>> PF08496.5  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.3   4.4e-05     0.068      59      94 ..      68     103 ..      31     123 .. 0.61

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.4e-05
   PF08496.5  59 eealldkeelkalekeekkeekekkkaekkkakkae 94 
                 e++  ++e++ka+++++kke+k+ kka+k++akk++
  MMETSP1325-20131115|1217_1  68 ERRRQKRERRKAAKRAAKKEAKALKKAAKRAAKKEA 103
                 223334445556666666666666666666666555 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.0   6.3e-05     0.096     122     154 ..      58      90 ..      24     101 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6.3e-05
   PF11861.3 122 deelkellekelakekreerrenerkqkeilke 154
                 d+ ++e++e+e+ ++kre+r++ +r+ k+++k 
  MMETSP1325-20131115|1217_1  58 DHFIAEEIENERRRQKRERRKAAKRAAKKEAKA 90 
                 5566789*********************99986 PP

>> PF06658.7  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   6.8   9.8e-05      0.15      69     110 ..      61     102 ..      52     120 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 9.8e-05
   PF06658.7  69 qqkreekekkdeektaKkrekRekkkqkkkkkkkkkkeekke 110
                   +  e+e++ +++ ++k +kR  kk++k  kk +k + kke
  MMETSP1325-20131115|1217_1  61 IAEEIENERRRQKRERRKAAKRAAKKEAKALKKAAKRAAKKE 102
                 444445555555555555555555555555555554444333 PP

>> PF12235.3  Fragile X-related 1 protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.37   5.6e+02       4      16 ..      35      47 ..      32      54 .. 0.85
   2 ?   12.6   3.7   6.6e-05       0.1      70     144 ..      56     131 ..      49     137 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.37
   PF12235.3  4 LrlERLQiDeQLR 16
                L lE +  DeQLR
  MMETSP1325-20131115|1217_1 35 LGLENMSKDEQLR 47
                78999999****9 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 6.6e-05
   PF12235.3  70 nseasnasEteserrdElsdrslagde.dreprsrrdsrrrrggrgRgqagrgrggggkgnsnsissvlkdpdsnp 144
                  s++  a E e+err+ +++r  a++   +++ +  ++ ++r ++  + +grgr+gg  ++  ++  + +dp+ ++
  MMETSP1325-20131115|1217_1  56 KSDHFIAEEIENERRRQKRERRKAAKRaAKKEAKALKKAAKRAAKKEALGGRGRRGGVLKHAGKLDLRPRDPSASS 131
                 6899999****************99885444444445556665777777********9999999998888887765 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.1   0.00016      0.24     406     446 ..      62     101 ..      48     129 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00016
   PF12569.3 406 aelsaaerkklrkkakkaekkaekeeaekaekeeekkaaek 446
                 ae+ ++er++ +++ +ka+k+a+k+ea++ +k ++++ a+k
  MMETSP1325-20131115|1217_1  62 AEEIENERRRQKRERRKAAKRAAKKEAKALKKAAKRA-AKK 101
                 3344444444444445554444444444322222211.111 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.1   0.00059      0.89      35      69 ..      64      98 ..      52     101 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00059
                -TTS-GG..G--HHHHHHHHHHHHHHHHHHCHH-- CS
  PF01163.17 35 darfkdrksktnprklvklwaekEfrnLkrleeag 69
                + + ++r++k+++rk +k +a+kE ++Lk++++++
  MMETSP1325-20131115|1217_1 64 EIENERRRQKRERRKAAKRAAKKEAKALKKAAKRA 98
                4444556899*******************998865 PP

>> PF04006.7  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   5.4    0.0021       3.1     539     576 ..      65     103 ..      39     112 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0021
   PF04006.7 539 eErdrtdkkreRrkk.krkkraekKavtkakkkrkikke 576
                  E +r  +kreRrk  kr  ++e+Ka++ka k+  +k+ 
  MMETSP1325-20131115|1217_1  65 IENERRRQKRERRKAaKRAAKKEAKALKKAAKRAAKKEA 103
                 344444444444443133333367888888887766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1450  (0.106056); expected 273.4 (0.02)
Passed bias filter:                      871  (0.0637068); expected 273.4 (0.02)
Passed Vit filter:                       135  (0.0098742); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.56u 0.46s 00:00:01.02 Elapsed: 00:00:00.87
# Mc/sec: 382.87
//
Query:       MMETSP1325-20131115|1219_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.91
# Mc/sec: 131.67
//
Query:       MMETSP1325-20131115|1223_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:01.18
# Mc/sec: 136.06
//
Query:       MMETSP1325-20131115|1221_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.73
# Mc/sec: 98.48
//
Query:       MMETSP1325-20131115|1224_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.66
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|1225_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.099   12.2   0.0       0.19   11.3   0.0    1.5  1  PF02183.13 Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.4e-05      0.19      25      40 ..      23      38 ..      16      41 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.4e-05
  PF02183.13 25 qkEkekLraevlsLke 40
                ++E+e+Lrae++sL++
  MMETSP1325-20131115|1225_1 23 RREVEQLRAELASLTG 38
                68************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.79
# Mc/sec: 236.60
//
Query:       MMETSP1325-20131115|1222_1  [L=332]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-23   81.9   0.1    6.2e-23   81.6   0.1    1.1  1  PF02668.11 Taurine catabolism dioxygenase TauD, TfdA family


Domain annotation for each model (and alignments):
>> PF02668.11  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.6   0.1   4.5e-27   6.2e-23      23     254 ..      15     270 ..       3     274 .. 0.77

  Alignments for each domain:
  == domain 1    score: 81.6 bits;  conditional E-value: 4.5e-27
                 EHHHHHHHHHHHH---EEEE---.......S----T.TT-----.---....-----.--.-SSBS--TT....-SSGGG----....--SB-S-TTSSS----EEEEEEE-------.EEEB---HHHHHHH...HHHHHHHTTEEEEEE----SS-................--EEEEEESEEE---.-EEEE---TT....TB...-S---S-HH...HHHHHHHHSTTT-EEE------EEEE-TTT-BB----------S-EE CS
  PF02668.11  23 dedlaelrealaehgvvlfrglp.......lspeqf.eelarrf.gpleqsprntfy.ge.twdvrsvka...nvkdaaytpedttralplHtDlsylesppgvqlLhclenpaeGGe.tlfvdgfaaynaLs...pelkellaegltyvysndgery....e..........eespekrhPlvrthpv.tgekvlyvnplatkiqglvtlaeseell...kaledhltdpeftyrhkwqeGdlvifdNrrvlHgrtafddetgeRhl 254
                 de   +++e la++g++ +++ p       ++  +   ela+r+ g+l+q+pr  +  g  +    +++a    +++ ++++ +  ++l +HtD ++ + +pg+  ++   +   G   t ++dg a++++L+   p++++ l +++++++s +  +y    +            +++++hP+++ + + + ekv  +      +++l ++++ ++ +    +  ++++d++f+ r+ w e+++++ dN+rvlHgr    +++ eR +
  MMETSP1325-20131115|1222_1  15 DELNMAFLETLARDGFCTITNMPkpeslevDDVGSPlNELAHRLvGKLYQHPRRRTAhGVmR----KKMAtaaAADHLSDYNLA--NPLSMHTDHAFIDGAPGYLQFMLQAQ---GSVvTKICDGLAVAEYLRhadPAAFAIL-STVNFTHSLRTIHYdengDychkgsehggVFEDCNTHPIIQLNDKgEVEKVAHSEI-KRGVCAL-PYEQYQPAMeayVKWMRLIEDERFVKRVPWPEHSVIVCDNHRVLHGRATQPADGTERCM 270
                 46777899***************8777554244443377*************9988667422....333323455555555555..7*****************99997655...5436****************99999999.8*************76551667788899977789*********6556666666666.4444466.88888887733355556999***************************976566666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.39s 00:00:01.00 Elapsed: 00:00:00.82
# Mc/sec: 970.23
//
Query:       MMETSP1325-20131115|1228_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.67
# Mc/sec: 954.97
//
Query:       MMETSP1325-20131115|1227_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.65
# Mc/sec: 766.83
//
Query:       MMETSP1325-20131115|1233_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       778  (0.0569046); expected 273.4 (0.02)
Passed bias filter:                      532  (0.0389116); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 338.80
//
Query:       MMETSP1325-20131115|1232_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-11   43.0   6.1    9.7e-06   25.3   0.6    2.5  2  PF13424.1  Tetratricopeptide repeat
    2.5e-10   39.7   4.2    0.00018   20.9   0.2    3.1  3  PF13414.1  TPR repeat
    1.8e-09   36.7   9.4     0.0014   18.0   0.1    4.5  5  PF00515.23 Tetratricopeptide repeat
    1.3e-06   27.6   7.5      0.038   13.6   0.2    4.3  4  PF13176.1  Tetratricopeptide repeat
    2.7e-06   26.7   5.7          1    9.3   0.2    3.9  4  PF07719.12 Tetratricopeptide repeat
    2.4e-05   23.6   0.2      0.058   13.0   0.1    3.6  4  PF13181.1  Tetratricopeptide repeat
     0.0039   17.1   4.4         13    6.2   0.0    3.9  3  PF13431.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.063   13.6   8.4       0.73   10.3   0.1    3.6  4  PF07721.9  Tetratricopeptide repeat
       0.21   11.4  10.4        4.6    7.1   0.0    3.6  4  PF13374.1  Tetratricopeptide repeat
       0.43   11.2   5.1        3.5    8.4   0.1    3.6  4  PF13428.1  Tetratricopeptide repeat
       0.58   10.6   2.4         11    6.5   0.0    3.4  4  PF13174.1  Tetratricopeptide repeat
        1.8    9.2   7.7       0.51   10.9   1.0    2.8  3  PF13432.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.3   3.6e-07   0.00041      21      76 ..      48      98 ..      42     100 .. 0.81
   2 !   25.3   0.6   8.5e-09   9.7e-06       8      78 .]     111     180 ..     106     198 .. 0.95

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 3.6e-07
   PF13424.1 21 ydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                +++A+ + ++ l+++     d++   +a +nl+ ++  l+d++ A +++++Al++a
  MMETSP1325-20131115|1232_1 48 LKRAIRYHQRHLDIA-----DDGGQFVAHTNLGLCLGLLEDNQTAAQHHQEALRVA 98
                556777777777776.....6666799**************************975 PP

  == domain 2    score: 25.3 bits;  conditional E-value: 8.5e-09
   PF13424.1   8 lnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                   nl+l+ +r+gd+  A ++  + l l ++l+d++++  +a+++l+ l +  gdy++A+  +e A +iae+
  MMETSP1325-20131115|1232_1 111 AGNLGLLAMRQGDLGTAKACMDQHLHLVQSLKDASAE-TNAWTQLGHLANLEGDYAAAVTAYENASQIAEQ 180
                 569************************99********.6**************************999985 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   3.1e-06    0.0035      20      67 ..      49      97 ..      44      99 .. 0.85
   2 ?    2.2   0.0      0.11   1.3e+02      42      62 ..     113     132 ..      97     142 .. 0.63
   3 !   20.9   0.2   1.6e-07   0.00018       4      51 ..     149     202 ..     144     209 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.1e-06
   PF13414.1 20 deAieayekAleldpnnae..lyynlAlaylklgkdyeeAledyekAlel 67
                + Ai++ ++ l++  +  +  ++ nl+l++  l +  + A+++ ++Al+ 
  MMETSP1325-20131115|1232_1 49 KRAIRYHQRHLDIADDGGQfvAHTNLGLCLGLLED-NQTAAQHHQEALRV 97
                679999999999988866677************86.589999*****985 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.11
   PF13414.1  42 nlAlaylklgkdyeeAledye 62 
                 nl+l+ +++g d   A ++ +
  MMETSP1325-20131115|1232_1 113 NLGLLAMRQG-DLGTAKACMD 132
                 6666666666.3454444444 PP

  == domain 3    score: 20.9 bits;  conditional E-value: 1.6e-07
   PF13414.1   4 ealkelGnalfkegdydeAieayekAleldpnnae......lyynlAlaylklg 51 
                  a+ +lG  +  egdy+ A+ aye+A ++ ++  e      + +n++ a  + g
  MMETSP1325-20131115|1232_1 149 NAWTQLGHLANLEGDYAAAVTAYENASQIAEQEGEigtlkrIICNIGVARGNAG 202
                 589***************************999998888889999888876655 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.4   2.8e+03       3      13 ..      13      23 ..      12      24 .. 0.79
   2 ?   -0.9   0.0       1.1   1.3e+03      18      30 ..      49      61 ..      48      64 .. 0.81
   3 !   16.1   0.0   4.9e-06    0.0056       3      30 ..      70      97 ..      68      98 .. 0.94
   4 ?    5.4   0.0     0.012        13       5      23 ..     112     130 ..     109     137 .. 0.87
   5 !   18.0   0.1   1.2e-06    0.0014       2      31 ..     149     178 ..     148     180 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 2.4
                HHHHHHHHHHH CS
  PF00515.23  3 alynlGnaylk 13
                a++ lG+ ++ 
  MMETSP1325-20131115|1232_1 13 AYNCLGVDCML 23
                8999*997765 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 1.1
                HHHHHHHHHHHHH CS
  PF00515.23 18 deAleyyekALel 30
                + A+ y ++ L +
  MMETSP1325-20131115|1232_1 49 KRAIRYHQRHLDI 61
                5799999999987 PP

  == domain 3    score: 16.1 bits;  conditional E-value: 4.9e-06
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23  3 alynlGnaylklgkydeAleyyekALel 30
                a+ nlG+++  l++ + A ++ ++AL++
  MMETSP1325-20131115|1232_1 70 AHTNLGLCLGLLEDNQTAAQHHQEALRV 97
                9*************************86 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.012
                 HHHHHHHHHTT-HHHHHHH CS
  PF00515.23   5 ynlGnaylklgkydeAley 23 
                  nlG++ +++g++  A ++
  MMETSP1325-20131115|1232_1 112 GNLGLLAMRQGDLGTAKAC 130
                 59**********9999887 PP

  == domain 5    score: 18.0 bits;  conditional E-value: 1.2e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALeln 31 
                 +a+ +lG++    g+y  A+ +ye A ++ 
  MMETSP1325-20131115|1232_1 149 NAWTQLGHLANLEGDYAAAVTAYENASQIA 178
                 69***********************97775 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0    0.0095        11      16      31 ..      49      64 ..      45      67 .. 0.87
   2 !    7.0   0.1    0.0045       5.2       1      29 [.      70      98 ..      70     104 .. 0.85
   3 ?    2.8   0.0       0.1   1.1e+02       4      32 ..     113     141 ..     110     145 .. 0.83
   4 !   13.6   0.2   3.3e-05     0.038       1      34 [.     150     183 ..     150     185 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0095
   PF13176.1 16 ekAielyeraLaltkd 31
                ++Ai++++r+L +++d
  MMETSP1325-20131115|1232_1 49 KRAIRYHQRHLDIADD 64
                69*******9988887 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0045
   PF13176.1  1 allnLarlysrlgdyekAielyeraLalt 29
                a+ nL+ +   l d ++A++++++aL+++
  MMETSP1325-20131115|1232_1 70 AHTNLGLCLGLLEDNQTAAQHHQEALRVA 98
                57899999999*************77554 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.1
   PF13176.1   4 nLarlysrlgdyekAielyeraLaltkdp 32 
                 nL+ l +r+gd  +A  +  ++L l ++ 
  MMETSP1325-20131115|1232_1 113 NLGLLAMRQGDLGTAKACMDQHLHLVQSL 141
                 9***********99999999988776665 PP

  == domain 4    score: 13.6 bits;  conditional E-value: 3.3e-05
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdpld 34 
                 a+ +L++l    gdy  A+++ye a ++++ +++
  MMETSP1325-20131115|1232_1 150 AWTQLGHLANLEGDYAAAVTAYENASQIAEQEGE 183
                 7899****9***************8888877765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         6   6.8e+03       3      12 ..      13      22 ..      12      24 .. 0.79
   2 !    9.2   0.0   0.00094       1.1       3      29 ..      70      96 ..      68     100 .. 0.93
   3 !    9.0   0.0    0.0011       1.3       5      26 ..     112     133 ..     108     135 .. 0.89
   4 !    9.3   0.2    0.0009         1       3      32 ..     150     179 ..     148     181 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 6
                HHHHHHHHHH CS
  PF07719.12  3 alynlGlayy 12
                a+++lG  ++
  MMETSP1325-20131115|1232_1 13 AYNCLGVDCM 22
                8999998776 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00094
                HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAle 29
                a+ nlGl++  l d + A+++ ++Al+
  MMETSP1325-20131115|1232_1 70 AHTNLGLCLGLLEDNQTAAQHHQEALR 96
                799***********************8 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.0011
                 HHHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12   5 ynlGlayyklgdyeeAleafek 26 
                  nlGl+++++gd+  A++++++
  MMETSP1325-20131115|1232_1 112 GNLGLLAMRQGDLGTAKACMDQ 133
                 69****************9875 PP

  == domain 4    score: 9.3 bits;  conditional E-value: 0.0009
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 a+ +lG ++   gdy+ A+ a+e A +++ 
  MMETSP1325-20131115|1232_1 150 AWTQLGHLANLEGDYAAAVTAYENASQIAE 179
                 788889999999*************88875 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       3.8   4.3e+03      19      33 ..      43      57 ..      42      58 .. 0.77
   2 ?    3.2   0.0     0.073        83       3      29 ..      70      96 ..      69      98 .. 0.89
   3 ?    2.7   0.0     0.098   1.1e+02       6      24 ..     113     131 ..     110     133 .. 0.91
   4 !   13.0   0.1   5.1e-05     0.058       2      32 ..     149     179 ..     148     181 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 3.8
                HHHHHHH---HHHH. CS
   PF13181.1 19 kAkeylekalelkpr 33
                ++ + l++a+ + +r
  MMETSP1325-20131115|1232_1 43 ESQATLKRAIRYHQR 57
                577889999999765 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.073
                -TTT---HHHHTT-HHHHHHHHH---H CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekale 29
                a++nlG+++  l d   A ++ ++al 
  MMETSP1325-20131115|1232_1 70 AHTNLGLCLGLLEDNQTAAQHHQEALR 96
                689*************99999888885 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.098
                 T---HHHHTT-HHHHHHHH CS
   PF13181.1   6 nlGdiYrqlGdydkAkeyl 24 
                 nlG++ +  Gd   Ak+++
  MMETSP1325-20131115|1232_1 113 NLGLLAMRQGDLGTAKACM 131
                 89**************998 PP

  == domain 4    score: 13.0 bits;  conditional E-value: 5.1e-05
                 --TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelkp 32 
                 +a+++lG++    Gdy +A  ++e a +++ 
  MMETSP1325-20131115|1232_1 149 NAWTQLGHLANLEGDYAAAVTAYENASQIAE 179
                 79************************99975 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.013        15      13      33 ..      68      88 ..      47      89 .. 0.82
   2 ?    6.2   0.0     0.011        13      13      33 ..     108     128 ..      94     129 .. 0.79
   3 ?    4.6   0.1     0.034        39      13      32 ..     148     167 ..     140     169 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.013
   PF13431.1 13 adaynnLAelllnnGdleeAe 33
                ++a++nL+++l  + d ++A 
  MMETSP1325-20131115|1232_1 68 FVAHTNLGLCLGLLEDNQTAA 88
                689*************99996 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.011
   PF13431.1  13 adaynnLAelllnnGdleeAe 33 
                 + a  nL++l  ++Gdl +A+
  MMETSP1325-20131115|1232_1 108 SIAAGNLGLLAMRQGDLGTAK 128
                 56667**************98 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.034
   PF13431.1  13 adaynnLAelllnnGdleeA 32 
                 ++a+++L+ l    Gd++ A
  MMETSP1325-20131115|1232_1 148 TNAWTQLGHLANLEGDYAAA 167
                 589**************988 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       7.3   8.3e+03       3      14 ..      70      81 ..      69      93 .. 0.58
   2 ?   -1.2   0.1       3.2   3.7e+03      13      24 ..      87      98 ..      83      98 .. 0.77
   3 ?   10.3   0.1   0.00064      0.73       3      26 .]     110     133 ..     109     133 .. 0.92
   4 ?    6.8   0.1    0.0087       9.9       6      25 ..     153     172 ..     149     173 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 7.3
                HH---HHHHHH- CS
   PF07721.9  3 allaLArallal 14
                a+ +L+  l +l
  MMETSP1325-20131115|1232_1 70 AHTNLGLCLGLL 81
                666676666554 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 3.2
                H-------HHHH CS
   PF07721.9 13 alGdldeArall 24
                a+ ++ eA++++
  MMETSP1325-20131115|1232_1 87 AAQHHQEALRVA 98
                567788999975 PP

  == domain 3    score: 10.3 bits;  conditional E-value: 0.00064
                 HH---HHHHHH-------HHHHHT CS
   PF07721.9   3 allaLArallalGdldeAraller 26 
                 a+ +L+ ++ ++Gdl +A a +++
  MMETSP1325-20131115|1232_1 110 AAGNLGLLAMRQGDLGTAKACMDQ 133
                 6889**************999886 PP

  == domain 4    score: 6.8 bits;  conditional E-value: 0.0087
                 --HHHHHH-------HHHHH CS
   PF07721.9   6 aLArallalGdldeAralle 25 
                  L+ ++ + Gd+++A ++ e
  MMETSP1325-20131115|1232_1 153 QLGHLANLEGDYAAAVTAYE 172
                 6999***********99876 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       9.1     1e+04      27      35 ..      50      58 ..      47      60 .. 0.62
   2 ?    7.1   0.3    0.0041       4.6       5      35 ..      71     101 ..      69     103 .. 0.89
   3 ?    7.1   0.0     0.004       4.6       4      25 ..     110     131 ..     108     138 .. 0.87
   4 ?    2.4   0.2      0.12   1.4e+02      11      33 ..     157     179 ..     149     183 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 9.1
   PF13374.1 27 ealairrrl 35
                +a  +++r+
  MMETSP1325-20131115|1232_1 50 RAIRYHQRH 58
                555666666 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0041
   PF13374.1   5 lnnLAlalrargryeeAlaleeealairrrl 35 
                  +nL+l l  + + + A ++++eal +  rl
  MMETSP1325-20131115|1232_1  71 HTNLGLCLGLLEDNQTAAQHHQEALRVAIRL 101
                 57***********************987665 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.004
   PF13374.1   4 alnnLAlalrargryeeAlale 25 
                 a+ nL+l+ +++g+++ A a +
  MMETSP1325-20131115|1232_1 110 AAGNLGLLAMRQGDLGTAKACM 131
                 678*************998765 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.12
   PF13374.1  11 alrargryeeAlaleeealairr 33 
                 + +  g+y++A+  +e a  i +
  MMETSP1325-20131115|1232_1 157 LANLEGDYAAAVTAYENASQIAE 179
                 55555*******99999988876 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       2.3   2.7e+03      16      41 ..      47      74 ..      43      77 .. 0.58
   2 ?    0.5   0.1         1   1.2e+03      11      26 ..      85     100 ..      70     117 .. 0.66
   3 ?    1.8   0.0      0.39   4.5e+02       4      25 ..     111     132 ..     108     144 .. 0.83
   4 ?    8.4   0.1     0.003       3.5       2      31 ..     149     178 ..     148     186 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 2.3
   PF13428.1 16 dpdeAiallrrala..laPddaealllL 41
                 +++Ai++ +r l   ++ ++  a+++L
  MMETSP1325-20131115|1232_1 47 TLKRAIRYHQRHLDiaDDGGQFVAHTNL 74
                4677777777775421455556666555 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 1
   PF13428.1  11 llalGdpdeAiallrr 26 
                 + a+++++eA++++ r
  MMETSP1325-20131115|1232_1  85 QTAAQHHQEALRVAIR 100
                 4456666666666554 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.39
   PF13428.1   4 llalarallalGdpdeAiallr 25 
                    l+ + +++Gd+  A a+ +
  MMETSP1325-20131115|1232_1 111 AGNLGLLAMRQGDLGTAKACMD 132
                 56799999******99988765 PP

  == domain 4    score: 8.4 bits;  conditional E-value: 0.003
   PF13428.1   2 eallalarallalGdpdeAiallrralala 31 
                 +a+ +l+++    Gd+++A+ +++ a + a
  MMETSP1325-20131115|1232_1 149 NAWTQLGHLANLEGDYAAAVTAYENASQIA 178
                 69**********************997665 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       4.2   4.8e+03      16      29 ..      41      54 ..      32      55 .. 0.74
   2 ?   -0.9   0.0       2.3   2.6e+03       5      21 ..      73      89 ..      70     100 .. 0.70
   3 ?    1.3   0.1      0.46   5.3e+02       5      24 ..     113     132 ..     113     133 .. 0.84
   4 ?    6.5   0.0      0.01        11       6      26 ..     154     174 ..     149     177 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 4.2
                HHHHHHHHHHHHHH CS
   PF13174.1 16 tdeAlealerlike 29
                t e+ ++l+r i+ 
  MMETSP1325-20131115|1232_1 41 TPESQATLKRAIRY 54
                67888999999875 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 2.3
                HHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAle 21
                +l+l++  l d + A +
  MMETSP1325-20131115|1232_1 73 NLGLCLGLLEDNQTAAQ 89
                68888888656666655 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.46
                 HHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAleale 24 
                 +l+l+  ++gd   A++ ++
  MMETSP1325-20131115|1232_1 113 NLGLLAMRQGDLGTAKACMD 132
                 6899999999*999999886 PP

  == domain 4    score: 6.5 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerl 26 
                 l+ +    gd+++A++a+e+ 
  MMETSP1325-20131115|1232_1 154 LGHLANLEGDYAAAVTAYENA 174
                 553333446*********985 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       2.6   2.9e+03      47      63 ..      48      64 ..      43      65 .. 0.67
   2 ?    5.5   0.2     0.022        25      13      48 ..      84     125 ..      81     129 .. 0.84
   3 ?   10.9   1.0   0.00045      0.51       3      57 ..     114     174 ..     113     181 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 2.6
   PF13432.1 47 ldeAaallraalalaPd 63
                l++A+++ +++l++a+d
  MMETSP1325-20131115|1232_1 48 LKRAIRYHQRHLDIADD 64
                56777777777777665 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.022
   PF13432.1  13 ydeAlaaleaalala......Peaaeallllaeallrlgrld 48 
                  + A++++++al+ a       +   a  +l+ +++r+g+l 
  MMETSP1325-20131115|1232_1  84 NQTAAQHHQEALRVAirlqsfSGQSIAAGNLGLLAMRQGDLG 125
                 57899999999999998888877999999*********9985 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 0.00045
   PF13432.1   3 lArallraGdydeAlaaleaalala......PeaaeallllaeallrlgrldeAaallraa 57 
                 l+++++r+Gd+  A a+ ++ l l           +a+  l+ ++   g++++A+ +++ a
  MMETSP1325-20131115|1232_1 114 LGLLAMRQGDLGTAKACMDQHLHLVqslkdaSAETNAWTQLGHLANLEGDYAAAVTAYENA 174
                 7999**************9999999888777669999******************555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.78
# Mc/sec: 700.47
//
Query:       MMETSP1325-20131115|1229_1  [L=411]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-45  153.4   1.0    4.8e-45  152.9   0.7    1.2  1  PF10602.4  26S proteasome subunit RPN7
    1.7e-12   47.4   0.0    3.6e-12   46.4   0.0    1.6  1  PF01399.22 PCI domain
  ------ inclusion threshold ------
      0.042   14.1   0.1        2.8    8.4   0.0    3.4  3  PF13174.1  Tetratricopeptide repeat
       0.11   11.7   0.0       0.19   11.0   0.0    1.3  1  PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)


Domain annotation for each model (and alignments):
>> PF10602.4  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.9   0.7   1.4e-48   4.8e-45       1     177 []      85     259 ..      85     259 .. 0.98

  Alignments for each domain:
  == domain 1    score: 152.9 bits;  conditional E-value: 1.4e-48
   PF10602.4   1 DeawveelrkknekeleeLdaelkdakenlikesirraledlaehYlkigdleeAlkaysrardy.ctslkhkidmllnvirvsiffndwslvskylekaksllekggdwerrnrlkvyeGlaalanrkfkeaaellldslstftslqykellsyedlaiygvlcalatldRsdLkkk 177
                 D+a+++el+++n++el++L+  l+da++n +++++ +al  +a +++++gd+eeA  a+  ++d+  +s++ kid  ++ +rv++ff+d + + k l  ak+l+e+ggdw+rrnrlkvye++  +  r+fk+aaellld ++tft    +el+sye +++y+vl++++ l+R dLkkk
  MMETSP1325-20131115|1229_1  85 DNALLSELKAANAEELAALKDTLEDAEQNHGETEVLDALFGIASFHARVGDKEEAYTAFDIIVDKpKVSTGKKIDASMAKLRVALFFMDTDTARKLLRSAKKLVEDGGDWDRRNRLKVYEAVFFMIERDFKSAAELLLDGVATFTC---TELCSYESFIFYAVLTNVLYLKRPDLKKK 259
                 8899*********************************************************8887379*****************************************************************************9...***************************97 PP

>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.0   1.1e-15   3.6e-12       4     104 ..     279     379 ..     276     380 .. 0.97

  Alignments for each domain:
  == domain 1    score: 46.4 bits;  conditional E-value: 1.1e-15
                 XXXXXXXXXXXXXXXXXXXXXX.....XXXXXXX------HHHHHHHHHHHHHS-SEE-TTT----SSS-HHHHHHHHHHHHH-------B-S----EE-- CS
  PF01399.22   4 sdllkalrsgnlsgfseelkdleeelladdglsqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIadgelrakidqpsgivvfk 104
                   l++ l++++++gf+ +l  l ++ll+d++++ +  +L ++ r  ++ q+   y+s+ l ++a+++++ +  +++ l+++Ia+ +l+akid + g+v+++
  MMETSP1325-20131115|1229_1 279 PVLVNGLYECEYAGFFNALVTLNSNLLRDRYIARHARYLIREYRILVYSQYLDAYKSVMLGTMASAFGVGQPFLDQELSRFIATSRLNAKIDKVGGMVITN 379
                 5799**********************************************************************************************986 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.89   3.1e+03      17      30 ..      67      80 ..      63      83 .. 0.81
   2 ?    8.4   0.0   0.00083       2.8       1      29 [.     121     149 ..     121     151 .. 0.91
   3 ?    1.1   0.0      0.18   6.1e+02      10      26 ..     169     184 ..     164     187 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.89
                HHHHHHHHHHHHH- CS
   PF13174.1 17 deAlealerlikey 30
                d+   ++e li++y
  MMETSP1325-20131115|1229_1 67 DKMAPYYEILIAKY 80
                666779******99 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00083
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   1 dAlyklalsyyklgdtdeAlealerlike 29 
                 dAl+ +a  + + gd++eA +a++ ++++
  MMETSP1325-20131115|1229_1 121 DALFGIASFHARVGDKEEAYTAFDIIVDK 149
                 8***********77*********999876 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.18
                 HHHHHHHHHHHHHHHHH CS
   PF13174.1  10 yyklgdtdeAlealerl 26 
                 ++ + dtd A+++l+  
  MMETSP1325-20131115|1229_1 169 LFFM-DTDTARKLLRSA 184
                 5668.9*******9975 PP

>> PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.5e-05      0.19     146     204 ..     101     159 ..      78     169 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.5e-05
   PF09986.4 146 elykeayekekfpiegideatvlYLiaeLerrlgnkeealkwlskvigskkaskpskik 204
                    k+++e  +++  + + +  l+ ia  + r+g+keea +++  +++++k+s  +ki 
  MMETSP1325-20131115|1229_1 101 AALKDTLEDAEQNHGETEVLDALFGIASFHARVGDKEEAYTAFDIIVDKPKVSTGKKID 159
                 5678889999999999999999*******************************977775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      452  (0.0330603); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.41s 00:00:01.17 Elapsed: 00:00:00.71
# Mc/sec: 1387.19
//
Query:       MMETSP1325-20131115|1234_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.68
# Mc/sec: 211.44
//
Query:       MMETSP1325-20131115|1235_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.71
# Mc/sec: 516.40
//
Query:       MMETSP1325-20131115|1238_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.90
# Mc/sec: 87.87
//
Query:       MMETSP1325-20131115|1239_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-17   62.0   0.0    5.6e-17   61.2   0.0    1.5  1  PF00271.26 Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2   0.0   4.1e-21   5.6e-17       4      78 .]     125     211 ..     122     211 .. 0.88

  Alignments for each domain:
  == domain 1    score: 61.2 bits;  conditional E-value: 4.1e-21
                 HH----EEEE-TTS-HHHHHHHHHHHHTTTS.SEEEESTTC-S---STTESEEEESSS...........BSSHHHHHHH------TT CS
  PF00271.26   4 ekkgikvailhgelpqnereeileqfnagks.kvlvatnvaerGidlpdvnvVinfdl...........prsvtsyiQriGRtgRag 78 
                  + g + + l+g+++++er++ ++ f++ +  +v+++t++++ G+d+p++n+Vin+dl             s+t y+Qr GR  Rag
  MMETSP1325-20131115|1239_1 125 FDLGNRPLLLTGDTEKSERDKLFRTFRDTEDyNVCICTDILGKGVDIPKLNMVINYDLpdekdeatgkfRISTTAYLQRGGRSTRAG 211
                 5667778899*****************98877**************************77777777777777777**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.34s 00:00:00.89 Elapsed: 00:00:01.51
# Mc/sec: 428.49
//
Query:       MMETSP1325-20131115|1240_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   14.8   0.0      0.022   14.7   0.0    1.3  1  PF04145.10 Ctr copper transporter family


Domain annotation for each model (and alignments):
>> PF04145.10  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.6e-06     0.022      25      60 ..       9      44 ..       4     103 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.6e-06
  PF04145.10 25 geyagsciaifllavlyegLkavrrklerklakras 60
                +++ ++++++f+++++y+gL a+++ + +   +r  
  MMETSP1325-20131115|1240_1  9 ASLPLTLLGVFFFSFFYQGLLALSKTFTAPAGRRVD 44
                566789*******************99987775553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.64
# Mc/sec: 430.60
//
Query:       MMETSP1325-20131115|1236_1  [L=436]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-10   39.9   0.0      6e-10   39.0   0.0    1.5  1  PF00447.12 HSF-type DNA-binding


Domain annotation for each model (and alignments):
>> PF00447.12  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   4.4e-14     6e-10       2     101 ..      50     136 ..      49     139 .. 0.85

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 4.4e-14
  PF00447.12   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFhkvkdeekkskkkekiweFkhksFkkgkkellekikrkk 101
                 F++ ++++++++      +w+++g++fv+++ ++fa+        + n++SF+RQ n YgF k + +++    +  + +F+h++Fk+g+ +ll+++  k+
  MMETSP1325-20131115|1236_1  50 FVETTFRVVSSPGS--GCWWTDDGDAFVISE-DDFAT--------TCNIKSFIRQCNHYGFTKQRLPSSV--GRGVLSQFSHPNFKRGRPDLLREVDAKH 136
                 77777888777765..469********9975.68999........78******************99976..457899****************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.80u 0.40s 00:00:01.20 Elapsed: 00:00:00.70
# Mc/sec: 1492.59
//
Query:       MMETSP1325-20131115|1237_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.63
# Mc/sec: 182.58
//
Query:       MMETSP1325-20131115|1244_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-06   24.5   0.4    5.1e-06   24.5   0.3    1.0  1  PF03200.11 Mannosyl oligosaccharide glucosidase
  ------ inclusion threshold ------
      0.064   13.1   0.3       0.18   11.6   0.1    1.8  2  PF05052.7  MerE protein


Domain annotation for each model (and alignments):
>> PF03200.11  Mannosyl oligosaccharide glucosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.3   7.4e-10   5.1e-06     689     779 ..      10      89 ..       2     103 .] 0.80

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 7.4e-10
  PF03200.11 689 dyGlrSlskssslymkrntehdapYWrgpiWiniNylilssLkhyskvdgpykekakeiykeLRsNlvrNvvkqyketGflwEqYddetGk 779
                  +Gl S+s  +s y  +       YWrg++W  +  l+  sL+ y +v     +++++  k L   +    ++q+++ G + E+Y++ +  
  MMETSP1325-20131115|1244_1  10 YWGLPSISADDSAYEAQ------GYWRGYVWGPMVQLTYWSLQAYDHV-----ASVRTARKALCVQMTALFLDQWNKHGHVCENYSPFESA 89 
                 59************764......49********************965.....556666678888899999**************986543 PP

>> PF05052.7  MerE protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.6e-05      0.18       7      45 ..      21      58 ..      16      70 .. 0.77
   2 ?   -1.4   0.0      0.32   2.2e+03       8      22 ..      85     102 ..      81     103 .] 0.66

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.6e-05
   PF05052.7  7 lPsetrkpitgYlWGalavltCpchLpilaavLaGttag 45
                +  e++  ++gY+WG +  lt   +L   + v +  ta 
  MMETSP1325-20131115|1244_1 21 SAYEAQGYWRGYVWGPMVQLT-YWSLQAYDHVASVRTAR 58
                55677788*************.78888887777766665 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.32
   PF05052.7   8 Psetrkpitg...YlWGa 22 
                 P e++   tg   Y WGa
  MMETSP1325-20131115|1244_1  85 PFESADDCTGdkfYHWGA 102
                 666666666555589986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.67
# Mc/sec: 368.40
//
Query:       MMETSP1325-20131115|1243_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-11   43.2   0.5    2.1e-10   40.9   0.0    2.0  2  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
    1.9e-07   30.4   0.1    4.2e-07   29.4   0.0    1.5  1  PF02209.14 Villin headpiece domain
     0.0034   16.2   0.0     0.0054   15.6   0.0    1.3  1  PF09192.5  Actin-fragmin kinase, catalytic


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.0   4.7e-14   2.1e-10     108     147 ..      18      57 ..      11      58 .. 0.92
   2 ?    0.2   0.1      0.16   7.1e+02      72      94 ..      63      87 ..      60     129 .. 0.65

  Alignments for each domain:
  == domain 1    score: 40.9 bits;  conditional E-value: 4.7e-14
   PF10152.4 108 ltvrkdpryakYfkmlklgVpaeavknKmqaeGldpelld 147
                  + +++p yak+fkmlk+ +p++a+ +Km aeGldp +l+
  MMETSP1325-20131115|1243_1  18 SKLKDHPVYAKFFKMLKMHLPKAAIAAKMAAEGLDPAVLE 57 
                 67789********************************997 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.16
   PF10152.4 72 pppppg..araeaaaqeaeaaraet 94
                ppppp+  a a+a++  a aa+ +t
  MMETSP1325-20131115|1243_1 63 PPPPPTgvACAHAPPTLAAAASLST 87
                5555553444444444444444443 PP

>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   9.2e-11   4.2e-07       2      27 ..     123     148 ..     123     153 .. 0.96

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 9.2e-11
                 S-HHHHHHHTSS-HHHHTTS-HHHHH CS
  PF02209.14   2 LsdedFeevFgMtkeeFykLPaWKqn 27 
                 Ls ++Fe+vFg ++++F + ++WKq+
  MMETSP1325-20131115|1243_1 123 LSADEFETVFGVSRDAFLAYKGWKQK 148
                 9************************7 PP

>> PF09192.5  Actin-fragmin kinase, catalytic
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.2e-06    0.0054      12      67 ..     168     218 ..     158     219 .] 0.86

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.2e-06
   PF09192.5  12 kslvisdiqdidWnslssielidssknnsgiillvtfnnnkeeqvvlKssstiaqe 67 
                 k + + d   idW+++  ++++  +  ++g++++ + n+   ++v++K    ia e
  MMETSP1325-20131115|1243_1 168 KVTAVKDLTTIDWSTVEGVQKSADG--SEGVLFVLLANS---KAVIIKCPDKIAAE 218
                 455679*****************99..*********999...89****98888866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.60
# Mc/sec: 874.67
//
Query:       MMETSP1325-20131115|1245_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-21   76.1   0.8      3e-21   75.4   0.5    1.4  1  PF12796.2  Ankyrin repeats (3 copies)
    3.5e-19   68.6   1.0    1.4e-09   38.0   0.0    2.5  2  PF13637.1  Ankyrin repeats (many copies)
    1.2e-17   62.5   4.4    4.6e-08   32.3   0.8    3.5  3  PF00023.25 Ankyrin repeat
    2.8e-14   51.6   0.6    0.00015   21.5   0.2    3.5  3  PF13606.1  Ankyrin repeat
      6e-09   35.7   5.9    9.3e-07   28.7   0.7    2.8  3  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.063   12.9   0.0       0.09   12.4   0.0    1.2  1  PF01157.13 Ribosomal protein L21e


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.4   0.5   1.3e-24     3e-21       3      83 ..      63     148 ..      61     154 .. 0.96

  Alignments for each domain:
  == domain 1    score: 75.4 bits;  conditional E-value: 1.3e-24
   PF12796.2   3 lAaengnlelvklLlekgadvdl.....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83 
                  A++ g le+v++L+e+gadv +     ++t Lh+Aa +g++ i+klLl++ ad+ a+++ gn+pLhlAv++++ e + +Ll +g+
  MMETSP1325-20131115|1245_1  63 RAVRDGELEIVMKLIEHGADVKTimdgyQNTGLHYAAFHGHHGIMKLLLQHHADPAAQNHVGNSPLHLAVEANQEESASILLMSGH 148
                 599*******************************************************************************8876 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0   6.3e-13   1.4e-09       6      54 .]      62     111 ..      58     111 .. 0.95
   2 !   36.0   0.1   2.6e-12     6e-09       5      54 .]      95     144 ..      95     144 .. 0.95

  Alignments for each domain:
  == domain 1    score: 38.0 bits;  conditional E-value: 6.3e-13
   PF13637.1   6 hyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklLl 54 
                  +a+++g le+v+ L+e+g+d+  + d+++nt Lh+Aa +g+  i klLl
  MMETSP1325-20131115|1245_1  62 LRAVRDGELEIVMKLIEHGADVKTImDGYQNTGLHYAAFHGHHGIMKLLL 111
                 58999*******************************************98 PP

  == domain 2    score: 36.0 bits;  conditional E-value: 2.6e-12
   PF13637.1   5 LhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 Lhyaa +g++ + klLl++ +d+ +++  Gn++Lh+A+++++ e +  Ll
  MMETSP1325-20131115|1245_1  95 LHYAAFHGHHGIMKLLLQHHADPAAQNHVGNSPLHLAVEANQEESASILL 144
                 8****************************************999887776 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   8.1e-05      0.18       9      28 ..      64      83 ..      62      87 .. 0.93
   2 !   32.3   0.8     2e-11   4.6e-08       3      32 ..      92     121 ..      90     122 .. 0.94
   3 !   17.9   0.0   7.2e-07    0.0016       2      25 ..     124     147 ..     123     153 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8.1e-05
                HHHTTHHHHHHHHHHTTSST CS
  PF00023.25  9 AalrgnlevvklLlsqGAdl 28
                A++ g le+v  L+++GAd+
  MMETSP1325-20131115|1245_1 64 AVRDGELEIVMKLIEHGADV 83
                89999**************8 PP

  == domain 2    score: 32.3 bits;  conditional E-value: 2e-11
                 CBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   3 fTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 +T LH+Aa++g++ ++klLl++ Ad+ aq+
  MMETSP1325-20131115|1245_1  92 NTGLHYAAFHGHHGIMKLLLQHHADPAAQN 121
                 889**************************9 PP

  == domain 3    score: 17.9 bits;  conditional E-value: 7.2e-07
                 SCBHHHHHHHTTHHHHHHHHHHTT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqG 25 
                 G++PLHlA++ ++ e ++ Ll  G
  MMETSP1325-20131115|1245_1 124 GNSPLHLAVEANQEESASILLMSG 147
                 9*******************9855 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0     2e-05     0.045       6      29 ..      61      84 ..      57      85 .. 0.90
   2 !   21.5   0.2   6.7e-08   0.00015       1      29 [.      90     118 ..      90     119 .. 0.94
   3 !   12.4   0.0   5.7e-05      0.13       2      25 ..     124     147 ..     123     150 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2e-05
   PF13606.1  6 LhlAasngrielveaLlengadin 29
                +  A++ g +e+v  L+e+gad+ 
  MMETSP1325-20131115|1245_1 61 FLRAVRDGELEIVMKLIEHGADVK 84
                6789******************95 PP

  == domain 2    score: 21.5 bits;  conditional E-value: 6.7e-08
   PF13606.1   1 nGnTpLhlAasngrielveaLlengadin 29 
                 + nT Lh+Aa +g+  ++++Ll+++ad+ 
  MMETSP1325-20131115|1245_1  90 YQNTGLHYAAFHGHHGIMKLLLQHHADPA 118
                 679************************85 PP

  == domain 3    score: 12.4 bits;  conditional E-value: 5.7e-05
   PF13606.1   2 GnTpLhlAasngrielveaLleng 25 
                 Gn+pLhlA++ ++ e +++Ll +g
  MMETSP1325-20131115|1245_1 124 GNSPLHLAVEANQEESASILLMSG 147
                 9**************999999765 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.065   1.5e+02      22      44 ..      63      85 ..      54      91 .. 0.89
   2 !   28.7   0.7   4.1e-10   9.3e-07       1      56 []      76     131 ..      76     131 .. 0.94
   3 !   16.2   0.2   3.5e-06    0.0079       1      41 [.     110     149 ..     110     165 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.065
   PF13857.1 22 lAakggalevvrlLlapgadlnl 44
                 A++ g le+v +L+++gad ++
  MMETSP1325-20131115|1245_1 63 RAVRDGELEIVMKLIEHGADVKT 85
                6999999************9875 PP

  == domain 2    score: 28.7 bits;  conditional E-value: 4.1e-10
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 L+ehg+++    d++ nt Lh+Aa +g+  +++lLl++ ad+ +++  g+++l+lA
  MMETSP1325-20131115|1245_1  76 LIEHGADVKTIMDGYQNTGLHYAAFHGHHGIMKLLLQHHADPAAQNHVGNSPLHLA 131
                 7899977777889999**************************************99 PP

  == domain 3    score: 16.2 bits;  conditional E-value: 3.5e-06
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgad 41 
                 Ll+h+ ad+ a++  gn+pLhlA+++++ e + +Ll+ g  
  MMETSP1325-20131115|1245_1 110 LLQHH-ADPAAQNHVGNSPLHLAVEANQEESASILLMSGHG 149
                 89998.9999999999****************999966554 PP

>> PF01157.13  Ribosomal protein L21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.9e-05      0.09      27      82 ..      71     126 ..      59     138 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.9e-05
                 CCCC--------EEE---TT-------CCC------B-...TTTB---EECEEE-- CS
  PF01157.13  27 stalkeykeGdivdikingsvqkGmphkafhGktGrvvnvtkgavGvivnkkvkdr 82 
                 + ++k  ++G  v+  ++g  + G+ + afhG+ G++  + ++    + + +v + 
  MMETSP1325-20131115|1245_1  71 EIVMKLIEHGADVKTIMDGYQNTGLHYAAFHGHHGIMKLLLQHHADPAAQNHVGNS 126
                 567888899***************************99888888877777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.65
# Mc/sec: 663.61
//
Query:       MMETSP1325-20131115|1245_2  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.73
# Mc/sec: 387.36
//
Query:       MMETSP1325-20131115|1248_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-20   71.5   0.1    7.9e-20   71.3   0.1    1.1  1  PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain
    6.1e-07   29.6   0.0    8.5e-07   29.1   0.0    1.2  1  PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00441.19  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3   0.1   1.2e-23   7.9e-20      92     150 .]       2      60 ..       1      60 [. 0.97

  Alignments for each domain:
  == domain 1    score: 71.3 bits;  conditional E-value: 1.2e-23
                 HHHHHHHHHHHHHHHHHH---GGGBTTSSHHHHHHHHTTTTT-------HHHHHHHHHH CS
  PF00441.19  92 KllaselaqevadeamqllGgrGyaeeyplerlyrdarvlrigeGtseiqrniiarrll 150
                 Kl+ase+a+ +a++a+q+lGg+Gy  ++p er+yrdar+++i+eGtse+q ++ia rll
  MMETSP1325-20131115|1248_1   2 KLCASEAATFCAHQAIQVLGGMGYVSDMPAERYYRDARITEIYEGTSEVQHLVIAGRLL 60 
                 9******************************************************9986 PP

>> PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   1.2e-10   8.5e-07      88     133 ..       3      48 ..       1      49 [. 0.94

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 1.2e-10
                 HHHHHHHHHHHHHHHTT---GGGBTT-HHHHHHHHHHH----TTT- CS
   PF08028.6  88 alavelavaavdrlfeaaGgsalfkesplqRfwRDahaaaaHalld 133
                   a e+a+ ++ +++++ Gg ++ ++ p +R++RDa+++ ++++++
  MMETSP1325-20131115|1248_1   3 LCASEAATFCAHQAIQVLGGMGYVSDMPAERYYRDARITEIYEGTS 48 
                 6799**************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|1247_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-92  307.2  15.4    6.7e-92  307.0  10.7    1.0  1  PF00124.14 Photosynthetic reaction centre protein


Domain annotation for each model (and alignments):
>> PF00124.14  Photosynthetic reaction centre protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  307.0  10.7   4.9e-96   6.7e-92       1     256 [.      28     329 ..      28     330 .. 0.99

  Alignments for each domain:
  == domain 1    score: 307.0 bits;  conditional E-value: 4.9e-96
                 EE------HHH..HHHHHHHHHHHHCCCHHT........TT-CHHHHHHGCC--B---STT-------TT-..........---CCCHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTHHHHH---TT----B--HHHHHHHHHHHHCTS-GGG-TT-HHHHHHHHHHHHHHHH---HHHHCCT-----CHHHHHT---HHHHHH.......HHHHHH-....-----TCHHHH---HHHHHHHHHHH---TT-.................----S-HHHHHHH-TT-GG CS
  PF00124.14   1 lYvGwfGvlsi..llaalgalliafnaaasv........tansllegrnlltlaveppsaeyGlslaplwe..........GGlwqlitlflliavlswllReveiarklgmgphvaiAFsaaiaaylvlvlirPilmgswseavpyGiashldwvsnfsleygnflynPfHmlgvaflfgsalllalhGalvlsvlrfekeeeveqiadrgtaqeeet.......lffrrli....gfsvnkrsiHrlalflavlgvltsaiGills.................gtvvenwydwlnkaneape 256
                 lY+GwfGvl+i  ll a+++++iaf+aa++v        +a+sl++g+n+++ av+p+s+++G++++p+we          GG++qli+l++l++v +w++Re+e++++lgm+p++ +AFsa++aa+ +++l++Pi++gs+s+++p+Gi+++++++++f++e+ n+l++PfHm gva++fg++l++a+hG+lv+s+l++e++e+++ +++++++qeeet        +f+rli    +f+ n+r +H+++++++v+g++ +a+G++++                 g+v+++w+d++n+a++++e
  MMETSP1325-20131115|1247_1  28 LYIGWFGVLMIptLLSATTCYIIAFIAAPPVdidgirepVAGSLMYGNNIISGAVIPSSNAIGVHFYPVWEaasvdewlynGGPYQLIVLHFLLGVSCWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEH-NILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTESESSNNGYKFGQEEETynivaahGYFGRLIfqyaSFN-NSRALHFFLAAWPVVGIWLTALGVSTMafnlngfnfnqsvvdseGRVINTWADIINRADLGME 329
                 6***********99*****************************************************************************************************************************************************.****************************************************************************.**********************************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.78
# Mc/sec: 1106.01
//
Query:       MMETSP1325-20131115|1241_1  [L=953]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (953 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.29u 0.36s 00:00:01.65 Elapsed: 00:00:00.98
# Mc/sec: 2330.33
//
Query:       MMETSP1325-20131115|1250_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.63
# Mc/sec: 962.35
//
Query:       MMETSP1325-20131115|1252_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   12.8   8.1        0.1   12.7   5.6    1.1  1  PF11928.3 Domain of unknown function (DUF3446)
        9.4    5.5   9.0        7.5    5.8   6.2    1.1  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF11928.3  Domain of unknown function (DUF3446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   5.6   1.5e-05       0.1      24      50 ..       9      35 ..       7      36 .] 0.72

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.5e-05
   PF11928.3 24 vsglvgvsappassssssssssssass 50
                +sg v + ++pa + ss ssssss+ss
  MMETSP1325-20131115|1252_1  9 LSGTVAMEEAPAPAYSSKSSSSSSSSS 35
                59*****99999977777765555543 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   6.2    0.0011       7.5      61      72 ..      24      35 ..       3      36 .] 0.59

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0011
   PF10500.4 61 ssssssssssss 72
                ss+sssssssss
  MMETSP1325-20131115|1252_1 24 SSKSSSSSSSSS 35
                333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.28u 0.43s 00:00:00.71 Elapsed: 00:00:00.59
# Mc/sec: 146.22
//
Query:       MMETSP1325-20131115|1253_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-13   49.7   0.0    3.4e-13   49.2   0.0    1.1  1  PF01738.13 Dienelactone hydrolase family
    0.00024   20.7   0.0    0.00032   20.3   0.0    1.3  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.033   13.9   0.2      0.043   13.5   0.1    1.4  1  PF12697.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF01738.13  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2   0.0   7.6e-17   3.4e-13      31     218 .]       5     189 .]       3     189 .] 0.83

  Alignments for each domain:
  == domain 1    score: 49.2 bits;  conditional E-value: 7.6e-17
  PF01738.13  31 rdiarrlaeeGyvalapdlYarqgldandtaeaasalrellkkreeavlddlkaainylkslpevstkkvgvvGfClGGalalllAaenpevdaavafYG......altlekpleeaakikapilahlgeeDpfipaeaaedleealakankdlelkiYpgagHaFaadsre..sydeaaaedawervleffkqll 218
                 + i++ la+eGy +++pd  +++  +a + + aa+a++  +    ++v +dl a +++l++        vg +GfC+G +   + ++e  ++++ v+ ++        +   + +  +++k pil + + +D    +    +l   + +++   e  +Y++ +H+ a +++      +  a+d  +r + ffk++l
  MMETSP1325-20131115|1253_1   5 KGICDTLANEGYLVVMPDCHRGDT-AAGKADFAAWARETPW----AKVNKDLLAVMAFLEAKG---ATSVGAIGFCWGVWALAKASSEGFDLKCGVGPHPstklegMVFGGDEKAMLEAAKMPILLMPASNDAAALKPG-GELCTVVEANGG--ESVSYDDMTHGWASRGDLskPEVARDAKDCYKRSIAFFKKHL 189
                 689******************999.7888777777775444....456889989999999999...678*********9987777777778*********98887644555666778999*************999996.777777856655..4579*********9988755777778999999******9986 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0     7e-08   0.00032      15     114 ..       4     130 ..       1     158 [. 0.69

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 7e-08
   PF12695.2  15 yeplaealakrgfavvavdlpghgasegaaaakrvl...................aadlldleriilvGhSlGGgvalelagrddrvkglvllapf............pdgedlakltlpvllihGtrDgv 114
                 ++++ ++la++g+ vv++d     +++g+a+ ++++                   +  ++++  ++ +G++ G ++ + + ++  ++k  v  +p+             +++ l + ++p+ll+ +++D  
  MMETSP1325-20131115|1253_1   4 LKGICDTLANEGYLVVMPDCHRGDTAAGKADFAAWAretpwakvnkdllavmaflE--AKGATSVGAIGFCWGVWALAKASSEGFDLKCGV--GPHpstklegmvfggDEKAMLEAAKMPILLMPASNDAA 130
                 578999*************9666666666655555556666666555555545322..35999****************777434444333..33322233333334345778888899999999999965 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   9.5e-06     0.043      19      87 ..       9      85 ..       4     176 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 9.5e-06
                HHHT.TTSEEEEE-----------S...S--HHHHHH............HHHHHHHH--.--EEEE--------HHHHHH-- CS
   PF12697.2 19 eaLa.agyrvvapDlpGhGrSdrppdydpdtledlaa............dlaalldalglrpvvlvGHSlGgavalaaaarr 87
                + La +gy vv+pD   +G++++     + +++ +a+            ++ a+l+a g++ v  +G ++G ++ + a ++ 
  MMETSP1325-20131115|1253_1  9 DTLAnEGYLVVMPDCH-RGDTAAG----KADFAAWARetpwakvnkdllAVMAFLEAKGATSVGAIGFCWGVWALAKASSEG 85
                668768********97.8999984....55677777777777777766678889999999***********99888877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.56
# Mc/sec: 794.58
//
Query:       MMETSP1325-20131115|1254_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.71
# Mc/sec: 259.89
//
Query:       MMETSP1325-20131115|1258_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.59
# Mc/sec: 576.75
//
Query:       MMETSP1325-20131115|1255_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-47  161.2   0.2    2.1e-47  161.0   0.1    1.0  1  PF00213.13 ATP synthase delta (OSCP) subunit
  ------ inclusion threshold ------
      0.034   13.9   0.1        1.2    8.9   0.1    2.6  2  PF06429.8  Flagellar basal body rod FlgEFG protein C-terminal


Domain annotation for each model (and alignments):
>> PF00213.13  ATP synthase delta (OSCP) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0   0.1   3.1e-51   2.1e-47       2     170 ..      37     206 ..      36     208 .. 0.98

  Alignments for each domain:
  == domain 1    score: 161.0 bits;  conditional E-value: 3.1e-51
  PF00213.13   2 arrYAkAlfelakekgaldeveeelealkavlaedkklkellsnpavsaeekkdllkkvfkg.klseavknflklLaenkRlallpeiaeefeelaaeaegiveaeVtsavpltdeqlkklkaaLekklgkkkvkleekvdpsliGGvvikvgdkviDgSvkgkLerlke 170
                   rYA+A + +a+++g+l++ve+el  +k+v+++++ ++ +l np+v +e k+++++k+f+g k s+ +kn++ ++a n+R++  ++++++f el+++++g+ve+ +tsavplt+ qlkk+++ L++++g + v ++++vd+s++GGv++++gdk++D+Sv++k++  k+
  MMETSP1325-20131115|1255_1  37 HARYANATYTAASKAGKLAQVETELLGFKEVMSKNAAFSGFLGNPTVAREAKVEAIEKMFDGpKTSPVTKNLMVTMASNNRIGEADKVVDAFAELMKAQRGEVECVITSAVPLTKPQLKKIQDGLASQTGGQAVAVSTVVDESILGGVTVQIGDKFLDMSVSSKINTYKR 206
                 679***********************************************************9*******************************************************************************************************9887 PP

>> PF06429.8  Flagellar basal body rod FlgEFG protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.024   1.6e+02      40      53 ..     124     137 ..     123     137 .. 0.90
   2 ?    8.9   0.1   0.00018       1.2       2      49 ..     153     197 ..     152     200 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.024
   PF06429.8  40 lveemtnlieaqra 53 
                 +v+++++l++aqr+
  MMETSP1325-20131115|1255_1 124 VVDAFAELMKAQRG 137
                 7999********95 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00018
   PF06429.8   2 glekggdnlyretsgapilgadadgkvaqgflegSNVnlveemtnlie 49 
                 +l+k++d+l  +t+g++ +++ +++ v ++ l g+ V++ + + ++ +
  MMETSP1325-20131115|1255_1 153 QLKKIQDGLASQTGGQA-VAV-STV-VDESILGGVTVQIGDKFLDMSV 197
                 699*******9999997.444.456.89999*********99999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.63
# Mc/sec: 794.98
//
Query:       MMETSP1325-20131115|1259_1  [L=475]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-56  188.4   0.7    1.2e-55  187.6   0.5    1.3  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
      4e-34  116.8   0.0    8.4e-33  112.5   0.0    2.4  2  PF03720.10 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
    2.7e-31  107.5   0.0    6.5e-31  106.2   0.0    1.7  1  PF00984.14 UDP-glucose/GDP-mannose dehydrogenase family, central domain
     0.0067   16.2   0.2      0.042   13.6   0.1    2.3  2  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase


Domain annotation for each model (and alignments):
>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.6   0.5   3.6e-59   1.2e-55       2     179 ..       9     191 ..       8     198 .. 0.96

  Alignments for each domain:
  == domain 1    score: 187.6 bits;  conditional E-value: 3.6e-59
                 EEEEE------------TTT--..-EEE---S-HHHHHHHH----SS-----HHHHH-------B-----HHHHHHT-SEEEE-----B--.....--B.----HHHHHHH---HHHH--EEEE-S------TTTTHHHHHHHH-----------------TTSHHHHHHS-S-EEE---STT-- CS
   PF03721.9   2 kiaviGlGYvGlptavvlaekg..hevvgvDineekvdklnsgkipiyEpgleellkknveegrlrfttdvkeavkeadvifiavgTpskk.....gkaaDlkyvesaaeeiaevlkkgkvvvvkSTvpvgtteelvkeilekaskkkvdfdvvsnPEflreGkalkdllnpdrvviGveeekae 179
                 ki+++G+GYvG pt++v+a+ +  ++v++vDi+e+++ ++ns+++pi Epgl e++++ +  ++++f+t+++e+++ead+ifi+v+Tp+k+     g+aa++k  e  a++iaev++ +k+vv+kSTvpv+t++  vk++l++  k+ v f+v+snPEfl+eG+a++dl+np+rv+iG+e+++++
  MMETSP1325-20131115|1259_1   9 KICCMGAGYVGGPTMAVIAANCpdIKVTVVDISEKQIGAWNSDDLPIFEPGLLEVVQQVR-GKNMFFSTAIDETIEEADIIFISVNTPTKTqgigaGRAANVKNCELCARKIAEVASANKIVVEKSTVPVRTAH-AVKRVLASSAKEGVTFQVLSNPEFLAEGTAMDDLQNPARVLIGGEQTPEG 191
                 8*********************99**********************************99.8*********************************99************************************9.9999999999989********************************99987 PP

>> PF03720.10  UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.076   2.6e+02      51      76 ..      69      94 ..      29     108 .. 0.75
   2 !  112.5   0.0   2.4e-36   8.4e-33       1     106 []     335     453 ..     335     453 .. 0.98

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.076
  PF03720.10 51 eknvelvsdleealkgadaivilteh 76
                 kn+ +++ ++e++++ad+i i ++ 
  MMETSP1325-20131115|1259_1 69 GKNMFFSTAIDETIEEADIIFISVNT 94
                5688889999**********998875 PP

  == domain 2    score: 112.5 bits;  conditional E-value: 2.4e-36
  PF03720.10   1 avlGlaFKkntdDlReSpaldiieeLleegaevkiyDPkvkeeaaealle.............eknvelvsdleealkgadaiviltehdefkeldleklkelmkkpavvfDgrnvldp 106
                 av+G+aFKk+t D+Re+++  ++++Llee+a+v++yDPkv+++ + ++l+             e+n+ ++ d+++a++ga+ai ilte+defk+ld++++++ m+kpa++fDgrn+ld+
  MMETSP1325-20131115|1259_1 335 AVYGFAFKKDTGDTRETASAFVCRDLLEEQAKVHVYDPKVERSVMFMELSytlqvtpetmpglEDNLITSPDAYTAAEGAHAIAILTEWDEFKTLDYKRIYDSMSKPAFLFDGRNILDH 453
                 79******************************************999888*************999***************************************************96 PP

>> PF00984.14  UDP-glucose/GDP-mannose dehydrogenase family, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   0.0   1.9e-34   6.5e-31       1      96 []     216     313 ..     216     313 .. 0.97

  Alignments for each domain:
  == domain 1    score: 106.2 bits;  conditional E-value: 1.9e-34
                 HHHHHHHHHHHHHHHHHHHHHHHH---HHHH------HHHHHHTT-TTTTSTT-----------HHHHHHHHHHHHHHTT---S..----HHHHHHHH CS
  PF00984.14   1 lktAEliKlaaNaflatkisfiNelaniaeavgadveevaeavgldprigkkflkpgigfGGsclpkDvlalvkkaeelgleak..lleavvnsneaq 96 
                 l+++El+Kl+aNa la+++s+iN++++++ea++adv+e+++a+g+dprig kfl++++gfGGsc++kD+l+lv+ +e  gl++   ++++v+++ne+q
  MMETSP1325-20131115|1259_1 216 LWSSELSKLVANAVLAQRVSSINSISALCEATDADVSEISRAIGSDPRIGPKFLNASVGFGGSCFQKDILNLVYLCETFGLHECaeYWHQVIKMNEYQ 313
                 589******************************************************************************99889*********976 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.1   1.2e-05     0.042       3     109 ..       9     149 ..       7     160 .. 0.82
   2 ?   -1.3   0.0      0.45   1.5e+03      17      45 ..     357     385 ..     355     401 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.2e-05
                 EBEEB-------HHHHHH..HH---EEEE--SSHHHHHHHHHTT...................EEE-SSHHHHHHHBSEEEE-SSSHHHHHHHHHH..............HCCC-----EEEE-S---HHHHHHHHHHHHH CS
  PF03446.10   3 kigfiGlGvMGspmalnl..lkagyevavynrtkekveelvaeg...................akaaesieelvasldvvilmvkagkavdeviege.............llealekgdilidgstsspedtrelakelke 109
                 ki  +G G  G p +  +  +  +++v+v++ +++++ ++ ++                    +   + i e ++++d++++ v+++++++ +  g+             ++e +++++i+++ st+ ++++ ++++ l++
  MMETSP1325-20131115|1259_1   9 KICCMGAGYVGGPTMAVIaaNCPDIKVTVVDISEKQIGAWNSDDlpifepgllevvqqvrgknMFFSTAIDETIEEADIIFISVNTPTKTQGIGAGRaanvkncelcarkIAEVASANKIVVEKSTVPVRTAHAVKRVLAS 149
                 78889999999886655522356899999999999999999998899999999999999998888888999********************999997666666666656666666************99999888877665 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.45
                 HHHHHH---EEEE--SSHHHHHHHHHTTE CS
  PF03446.10  17 alnllkagyevavynrtkekveelvaega 45 
                 ++ ll+++ +v+vy+ + e+   +++   
  MMETSP1325-20131115|1259_1 357 CRDLLEEQAKVHVYDPKVERSVMFMELSY 385
                 57799999*******99888877776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.38s 00:00:01.17 Elapsed: 00:00:00.82
# Mc/sec: 1388.13
//
Query:       MMETSP1325-20131115|1257_1  [L=549]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-26   91.7  20.8    3.1e-25   88.4  14.9    1.9  2  PF01061.19 ABC-2 type transporter
    8.4e-15   55.0   0.0    1.2e-14   54.5   0.0    1.3  1  PF00005.22 ABC transporter
    4.1e-12   45.6  15.9    7.4e-12   44.8  11.0    1.4  1  PF12698.2  ABC-2 family transporter protein
    2.1e-05   23.4   2.7    3.8e-05   22.5   1.9    1.4  1  PF12679.2  ABC-2 family transporter protein
    0.00014   21.8   0.0       0.43   10.3   0.0    2.3  2  PF13304.1  AAA domain
     0.0014   19.2   0.0     0.0033   18.0   0.0    1.6  1  PF13207.1  AAA domain
  ------ inclusion threshold ------
      0.015   15.0   0.0      0.025   14.3   0.0    1.3  1  PF13671.1  AAA domain
      0.024   14.6   0.0      0.049   13.6   0.0    1.6  1  PF13401.1  AAA domain
      0.026   13.8   0.6       0.66    9.2   0.2    2.4  2  PF13481.1  AAA domain
      0.032   14.3   0.0       0.14   12.2   0.0    1.9  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.039   13.0   0.0       0.54    9.3   0.0    2.1  1  PF02463.14 RecF/RecN/SMC N terminal domain
        0.1   12.7   0.0       0.24   11.5   0.0    1.6  1  PF13238.1  AAA domain
       0.14   10.9   0.0       0.21   10.3   0.0    1.2  1  PF00437.15 Type II/IV secretion system protein
       0.15   12.2   0.1        0.3   11.2   0.1    1.4  1  PF13476.1  AAA domain
       0.16   11.8   0.0       0.31   10.8   0.0    1.4  1  PF13521.1  AAA domain


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.4  14.9   3.4e-28   3.1e-25       2     208 ..     263     472 ..     262     473 .. 0.94
   2 ?    0.4   0.0      0.29   2.7e+02      53      82 ..     517     546 ..     496     549 .] 0.78

  Alignments for each domain:
  == domain 1    score: 88.4 bits;  conditional E-value: 3.4e-28
  PF01061.19   2 qikallkreflqryrdpslgllwkliqpllmalvfgtvfgnlg.nssgglqrpgllffsvlflafslltsiapiferergvlerelvsplyslsaivlakvlvelpvsllqaiifllivyflvgldls.....fflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsm.pkwlqwiyylnPltyavealrsnl 208
                 q+++++ r++ + + ++ l+     +q + +++++g +f +lg +++++++r+ + f  ++  +++ ++++ ++f ++  +l + l ++++++ ++++ak+l+  pv  ++++++++ +y l g+++      f+ +l + ++++ ++ slg++i+a++++ e  + ++++ l+ l+ +sG+f+ +ds+ p  l+w+  +nP +y++ ++ +++
  MMETSP1325-20131115|1257_1 263 QTLVIFERSWVKTKVSK-LN-TPFYLQQIAIGIIMGILFVGLGdDEEDIFSRVSFAFNYLMGALYLPIMEVLFLFLQDSLTLRKDLLAKAHHPLPYYVAKILSVTPVLAILLVLMTVSTYTL-GFYRFgsvqqFVAVLAAQFVVGNVFASLGICIGAFVKNPEYLMSVTMIWLVYLFAFSGFFVTIDSImP-ALRWLVVINPASYGFALFFQII 472
                 88899999999887777.66.6779******************8899999***********************************************************************9.999987777669999999************************************************99.***************9998886 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.29
  PF01061.19  53 pgllffsvlflafslltsiapiferergvl 82 
                 p+ ++fsvl  +++l++s++  f+ e+  l
  MMETSP1325-20131115|1257_1 517 PIGVCFSVLIGMYVLCFSAGYAFFNEKIGL 546
                 667889999999999999999999887665 PP

>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   1.3e-17   1.2e-14      35     118 .]      46     140 ..      13     140 .. 0.86

  Alignments for each domain:
  == domain 1    score: 54.5 bits;  conditional E-value: 1.3e-17
                 HH..EEEE-------.--BHHHHHH----S--.....-HHHHHHHHHH---HHHH--....----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  35 lr..igyipqdpllfpeltvrenldmakeekk.....tdkrieevlekvgldelldk....srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 l+  +g+i+qd   fpeltvr+ l +a +        +++r++++l++++l+e  d       v+++SgGq++rv++A +l++kp++ll+DEPt+
  MMETSP1325-20131115|1257_1  46 LKrcVGFIEQDDVTFPELTVRQALTFAARLRLagskeREERVDQLLAEMRLEECSDVliggGLVHGISGGQRKRVCIATELISKPRFLLCDEPTS 140
                 2257********************9998875599999****************77779999999*****************************96 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8  11.0   8.1e-15   7.4e-12     162     340 ..     315     530 ..     276     538 .. 0.80

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 8.1e-15
   PF12698.2 162 laglllfilifigaliialsiveEkesrikelqlvsgvspfaywlskilgdllvgliqlllill..lafglegipfg...nlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfpleslpsflkwifsiiPffslgdgllriitgd.lse..................................illsliiLllfavvyll 340
                 +a+ +l+ +++++++ + + ++++  + +++ +l+    p+ y+++kil++  v  i l+l+ +  + +g  ++ fg   +++++l   ++ g ++++lg ++++++k+++  ++v++i ++ l++f++++++++s+  +l+w+  i+P+++ + ++++ii  + + +                                  ++ ++++++   + +++
  MMETSP1325-20131115|1257_1 315 FAFNYLMGALYLPIMEVLFLFLQDSLT-LRKDLLAKAHHPLPYYVAKILSVTPVLAILLVLMTVstYTLG--FYRFGsvqQFVAVLAAQFVVGNVFASLGICIGAFVKNPEYLMSVTMIWLVYLFAFSGFFVTIDSIMPALRWLVVINPASYGFALFFQIILKVgPTPdfrcaehsdyevcdqngddddgfitpddilehykLGAPIGVCFSVLIGMYV 530
                 566778888888888888777777666.77777788899************************9444777..5888888999********************************9888888877777777777****************************7664444666666777777777777778888888888888744444444444444433 PP

>> PF12679.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   1.9   4.2e-08   3.8e-05     102     275 ..     346     542 ..     338     544 .. 0.75

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 4.2e-08
   PF12679.2 102 lLskPvsRseillgKllggllvgli.lliailatvlltlvviaalgislalgdlllllllsvllllavlvflalgllvSsvlkssstaaaaalvllfllsllspilvlgiaklkaeelvikdklsflsptsa.ynlllgellktsdvn................................lknatnllvllaylavflglay...vlFkrk 275
                 lL+k +    ++++K+l+   v  i l+++++ t+ l       + + + + + +  +l++++++  v  f++lg+ +++++k+    ++++ + l++l  +s+++v   + ++a+ +        ++p+s+ + l  + +lk ++                                  +k  + ++v    l+++ +l++   ++F+++
  MMETSP1325-20131115|1257_1 346 LLAKAHHPLPYYVAKILSVTPVLAIlLVLMTVSTYTL-------GFYRFGSVQQFVAVLAAQFVVGNV--FASLGICIGAFVKNPEYLMSVTMIWLVYLFAFSGFFVTIDSIMPALRWL-----VVINPASYgFALFFQIILKVGPTPdfrcaehsdyevcdqngddddgfitpddilehYKLGAPIGVCFSVLIGMYVLCFsagYAFFNE 542
                 788888888999****999999555555555555554.......444444445555555555555545..6********************9999999999999998554555555554.....77777777555566666666655599999999999999999999************8888888998899999999988888888776 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0012       1.1       3      20 ..       3      20 ..       2      35 .. 0.87
   2 !   10.3   0.0   0.00047      0.43     236     287 ..     111     159 ..      98     176 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0012
   PF13304.1  3 viiGpNgsGKSnlLkald 20
                ++ Gp g+GK+++L+al 
  MMETSP1325-20131115|1257_1  3 AVMGPTGCGKTTFLSALG 20
                689*************94 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00047
   PF13304.1 236 dlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsn 287
                   S G+++   ++t l+s +   ++ll DEp +gL+ +    +i++l++l++
  MMETSP1325-20131115|1257_1 111 GISGGQRKRVCIATELISKP---RFLLCDEPTSGLDSETALVIINVLQNLAD 159
                 459*****************...9**************99999999988876 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.6e-06    0.0033       3      34 ..       3      36 ..       2     115 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 3.6e-06
                --B--TT---HHHHHHHHHHSTEEE.EEGGG.B- CS
   PF13207.1  3 aitGppGsGKsTlakeLaerlglpv.lsldd.ll 34
                a+ Gp+G+GK+T+  +L  rl+  v  s d+ + 
  MMETSP1325-20131115|1257_1  3 AVMGPTGCGKTTFLSALGSRLDPSVvMSADAqIS 36
                689******************8554146666553 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   2.8e-05     0.025       4      33 ..       4      65 ..       2     121 .. 0.70

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.8e-05
   PF13671.1  4 lvGlpGsGKstlaerllkklg.yvrlsqdt...............................l 33
                + G+ G+GK+t++ +l  +l+  v++s+d+                               +
  MMETSP1325-20131115|1257_1  4 VMGPTGCGKTTFLSALGSRLDpSVVMSADAqiswggqpwsaalkrcvgfieqddvtfpeltV 65
                78***************999989999999988888888777555555555555555555552 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   5.4e-05     0.049       7      47 ..       2      35 ..       1     104 [. 0.75

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5.4e-05
   PF13401.1  7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvv.fveapa 47
                ++v G++G+GKTt+l  l ++l        +++vv + +a+ 
  MMETSP1325-20131115|1257_1  2 MAVMGPTGCGKTTFLSALGSRL--------DPSVVmSADAQI 35
                6899****************99........566554555554 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.2   0.00072      0.66      37      59 ..       3      38 ..       1     102 [. 0.75
   2 ?    2.4   0.0     0.089        81     167     189 ..     149     171 ..     139     175 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00072
   PF13481.1 37 llaGapgtGKStlalqlaaava.............t 59
                +++G++g+GK+t++ +l+ ++               
  MMETSP1325-20131115|1257_1  3 AVMGPTGCGKTTFLSALGSRLDpsvvmsadaqiswG 38
                789**************9887666666665444444 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.089
   PF13481.1 167 aviaalerlakrtgaavllvhHt 189
                  +i+ l++la++ g+++++ +H 
  MMETSP1325-20131115|1257_1 149 VIINVLQNLADTAGMCIVCSIHQ 171
                 57999*************99996 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00015      0.14       2      27 ..       3      28 ..       2      56 .. 0.84
   2 ?   -0.9   0.0       1.6   1.5e+03      78      99 ..      79     100 ..      66     129 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00015
                EEE-------HHHHHHHHHHCTHEEE CS
  PF00004.24  2 llyGppGtGKTllakavakelgvefl 27
                 ++Gp G+GKT++ +a+ + l+ +++
  MMETSP1325-20131115|1257_1  3 AVMGPTGCGKTTFLSALGSRLDPSVV 28
                689**************999875554 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 1.6
                 .TTHCHHHHHHHHHHHHHTTTT CS
  PF00004.24  78 eseeeervvnqLlteldgvkkk 99 
                  s+e+e+ v+qLl+e+  ++ +
  MMETSP1325-20131115|1257_1  79 GSKEREERVDQLLAEMRLEECS 100
                 5678888999999999877664 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00059      0.54      28     201 ..       3     173 ..       1     189 [. 0.67

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00059
                 EE--------HHHHHHHHHH------.-------TTSS----------EEEEE..EEEE----E.......EEEEEEEE----EEEEE---EE-HHHHHHHHHCTT--TT...........G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEE.EEE-S-HHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx RF
  PF02463.14  28 aivGpNGSGKsnvldAilFvLGeksakklrseklsdlihkskskakvksaeve..itfdnedkelvieeeevsitrrvkrkgeseykingkevtkkevaellesagiske...........lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQf.ivislreem 201
                 a++Gp G+GK+ +l A+    G +   ++   ++++ i+    + +  sa ++  + f ++d+   ++ +e+++++ +      + ++ g++ +++ v +ll+++++++             +SgG+++ v     +A++ +++  + l De  + LD +    + ++l++  ++a + iv s+++  
  MMETSP1325-20131115|1257_1   3 AVMGPTGCGKTTFLSAL----GSRLDPSVV-MSADAQISW---GGQPWSAALKrcVGFIEQDD---VTFPELTVRQALTFAA--RLRLAGSKEREERVDQLLAEMRLEECsdvliggglvhGISGGQRKRVC----IATELISKPRFLLCDEPTSGLDSETALVIINVLQNLADTAGMcIVCSIHQPS 173
                 68888888888888888....544443332.333344443...22222333330022333333...3566666665555544..488888888888899999888888878888888888899999999665....46777788889999*********99999999999999886551666666655 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00027      0.24       3      23 ..       4      34 ..       3     135 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00027
   PF13238.1  3 itGtpGvGKtTlakeLaerl..........g 23
                + G++G+GKtT + +L +rl           
  MMETSP1325-20131115|1257_1  4 VMGPTGCGKTTFLSALGSRLdpsvvmsadaQ 34
                78***************99976444444440 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00023      0.21     132     153 ..       3      24 ..       1      33 [. 0.84

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00023
  PF00437.15 132 lvsGgTgsGKttllnallaein 153
                  v G+Tg GKtt+l+al + ++
  MMETSP1325-20131115|1257_1   3 AVMGPTGCGKTTFLSALGSRLD 24 
                 589************9977665 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00033       0.3      24      39 ..       4      19 ..       2      21 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00033
   PF13476.1 24 ItGpNGsGKTTildAi 39
                + Gp+G+GKTT+l A+
  MMETSP1325-20131115|1257_1  4 VMGPTGCGKTTFLSAL 19
                67***********997 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00034      0.31       3      27 ..       3      28 ..       1      39 [. 0.82

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00034
   PF13521.1  3 vitGgpstGKTtlleaLaar.gypvv 27
                +++G+ ++GKTt l+aL +r + +vv
  MMETSP1325-20131115|1257_1  3 AVMGPTGCGKTTFLSALGSRlDPSVV 28
                799**************977555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       554  (0.0405208); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.00u 0.36s 00:00:01.36 Elapsed: 00:00:00.87
# Mc/sec: 1512.18
//
Query:       MMETSP1325-20131115|1262_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   13.2   0.4      0.026   12.8   0.3    1.1  1  PF00290.15 Tryptophan synthase alpha chain
      0.035   14.1   0.3       0.15   12.1   0.0    1.9  2  PF13038.1  Domain of unknown function (DUF3899)


Domain annotation for each model (and alignments):
>> PF00290.15  Tryptophan synthase alpha chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   3.8e-06     0.026     171     244 ..      57     127 ..      55     138 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.8e-06
                 --------SS--TTHHHHHHHHHHH-SS-EE------SHHHHHHHHH------EE--CCCCC--.--SSS---- CS
  PF00290.15 171 raGvTGarealeeevkelvervkkltavpvavGFGistpeqvkkvaekvadGvivGSalvdkieeeleekekkl 244
                 r GvT a+++ +++++    ++++ +   v++G G    + + ++  +va G+++G  + ++ +e++e  ++++
  MMETSP1325-20131115|1262_1  57 RKGVTEAETEKNADINPQTGKLRRRS--EVVIGIGALVATFILTAS-TVAKGIVSGVRMLTRSKEAKEAMQSEM 127
                 68*********************999..677788877777777776.99*******999998886655555444 PP

>> PF13038.1  Domain of unknown function (DUF3899)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.2e-05      0.15      15      85 ..      30     101 ..      21     104 .. 0.63
   2 ?   -0.1   0.0      0.14   9.8e+02      32      59 ..     108     133 ..     104     139 .] 0.54

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.2e-05
   PF13038.1  15 iglllfiiqsGfFdgfsygfrrlfrslvkkkeksaieddefandkkvkk..kesvstwtaplllsglllilss 85 
                   ++++   +GfF  + + fr ++++l+k     + e ++++ + +  k  ++s   + + +l+++++l++s+
  MMETSP1325-20131115|1262_1  30 SLFIWYRAYRGFFVIVPEVFRAVREKLRKGVTEAETE-KNADINPQTGKlrRRSEVVIGIGALVATFILTAST 101
                 468889999********************99554444.44444444444233333333334444446666665 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.14
   PF13038.1  32 ygfrrlfrslvkkkeksaieddefandk 59 
                 +g+r l rs+  k+   +++++++++++
  MMETSP1325-20131115|1262_1 108 SGVRMLTRSKEAKE--AMQSEMNLTPKE 133
                 56666666665555..444445544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       464  (0.033938); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.65
# Mc/sec: 512.45
//
Query:       MMETSP1325-20131115|1263_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   21.8   0.3     0.0002   21.0   0.2    1.5  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.2   1.4e-08    0.0002       4      24 ..      84     104 ..      81     105 .] 0.88

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 1.4e-08
                 SEEE.E.E-.---EEEEETTT- CS
  PF00397.21   4 gWeersddd.dGrvYYyNheTg 24 
                 +W+e +d + +G +YY+N+ Tg
  MMETSP1325-20131115|1263_1  84 PWKELFD-EkYGVPYYHNTLTG 104
                 6*****5.779**********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.65
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|1264_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.67
# Mc/sec: 486.42
//
Query:       MMETSP1325-20131115|1260_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 516.46
//
Query:       MMETSP1325-20131115|1265_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.052   13.4   0.2       0.11   12.4   0.1    1.5  1  PF01535.15 PPR repeat


Domain annotation for each model (and alignments):
>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.9e-06      0.11       7      28 ..      32      53 ..      27      56 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.9e-06
  PF01535.15  7 IsgyckaGkleeAlelfkeMke 28
                + +++ aGk +eA+ l+ eM+ 
  MMETSP1325-20131115|1265_1 32 LEACAGAGKGREAIALLGEMRG 53
                67999***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.84
# Mc/sec: 436.48
//
Query:       MMETSP1325-20131115|1256_1  [L=763]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-45  154.0   0.1    4.9e-44  150.7   0.0    1.9  1  PF09317.6  Domain of unknown function (DUF1974)
    9.6e-17   61.4   0.2    7.6e-16   58.5   0.0    2.6  4  PF02771.11 Acyl-CoA dehydrogenase, N-terminal domain
    5.8e-11   42.5   0.5    5.8e-11   42.5   0.4    1.8  2  PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF09317.6  Domain of unknown function (DUF1974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.7   0.0   1.1e-47   4.9e-44       1     245 [.     454     709 ..     454     723 .. 0.89

  Alignments for each domain:
  == domain 1    score: 150.7 bits;  conditional E-value: 1.1e-47
   PF09317.6   1 iRCHPYvlkeleaaqsedkkealkaFdkalfkhigfvvsnalralvlgltggrlasap.......vsgetkryyrqlsrlSaalAllaDlallvLGGeLKrkerlSARLgDvlsqLYlasavLkryedegrqeedlplvewaledslakiekaldellaNfpnr...avavllrvlvfplgr...rvkkpsDklkrevAelllepseardrltagvylpedeedpvgrlekafkavleaeplekklkkaekkgklkkk 245
                 +RCHP+++  +++++s+d k a   F + l+k  g+v+ n+  ++ +gl+++  +           ++ t+ +  ql rlS++lA+ aDlall LGG LK  e l +R++D++s +Yl  avL +y++++  e  ++  e+a+ +  +++++al+e+ aNfp++   a+++l+ + + plg+   +++ psD+l++evAell++ps  r+ + +++y++ +e+d++  l +a+   +ea++++k l+k++++ + ++ 
  MMETSP1325-20131115|1256_1 454 TRCHPHMVPIIDSLDSDD-KGAPVIFRDNLIKMFGHVFYNLGGSVARGLSSSVSSMLRsssaykdGDKLTSFHESQLLRLSQNLAYSADLALL-LGGRLKFEELLLGRMADAMSAIYLGYAVLWHYQHQKGIEGLEAATEHAMLTLEHEAQEALREAAANFPAPlgsAFGFLMGLGTSPLGElsrPYRPPSDALTKEVAELLTKPSGLRELFNTHIYVSGEETDQLSTLLRALPVCVEADQIQKTLRKEKRDPTAEEA 709
                 6*****************.7999************************9998764422222245546667778899****************86.9*******************************************************************75222789999999***9975436****************************************************************97665554 PP

>> PF02771.11  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0   1.7e-19   7.6e-16       7     112 ..      64     175 ..      60     176 .. 0.82
   2 ?   -4.4   0.0         3   1.4e+04      36      43 ..     356     363 ..     342     371 .. 0.52
   3 ?   -3.6   0.1         3   1.4e+04       2      14 ..     600     612 ..     599     614 .. 0.85
   4 ?   -1.4   0.0      0.68   3.1e+03      73     108 ..     711     743 ..     694     747 .. 0.67

  Alignments for each domain:
  == domain 1    score: 58.5 bits;  conditional E-value: 1.7e-19
                 HHHHHHHHHHHHTTT...THHHHH..HHT---HHHHHHHHH---TSTTS-TT-------HHHHHHHHHHHHHH--TTCHHHHHHHHCC.HHHHHH---HHHHHHHHHHHHCS CS
  PF02771.11   7 lrdevrefaeeelap...eaaewd..eeeefprelwrklaelGllgitvpeeyGGagldalelalvleelaradaglavalgvhsslv.apailrfGteeqkkkyLpklasg 112
                 l de ++f+++e+      ++++   +++++p e+w+ + + G++++ +p+e+GG g+++ +   vl  l+  ++   ++++v++sl+ ++++ r+Gt+eq++ +Lp+lasg
  MMETSP1325-20131115|1256_1  64 LSDEEKSFLDNECNHlcsIIDDYSvvQNADLPPEAWDYMRKEGFFAMKIPKEWGGKGFSTAAVSAVLCKLGSRCSDANATVAVPNSLGpGELLVRYGTPEQQQYFLPRLASG 175
                 6666677888877542223455555345599999*****999***************998888889999999888877899999***9559********************9 PP

  == domain 2    score: -4.4 bits;  conditional E-value: 3
                 HHHHHHH- CS
  PF02771.11  36 lwrklael 43 
                 ++ +++ +
  MMETSP1325-20131115|1256_1 356 ALARMGTQ 363
                 22333333 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 3
                 HHHHHHHHHHHHH CS
  PF02771.11   2 eeqealrdevref 14 
                 e qealr+++++f
  MMETSP1325-20131115|1256_1 600 EAQEALREAAANF 612
                 7899999999988 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 0.68
                 HH--TTCHHHHHHHHCCH.HHHHH---HHHHHHHHHH CS
  PF02771.11  73 radaglavalgvhsslva.pailrfGteeqkkkyLpk 108
                 + ++    a  + +++v   +  ++G  eq++ y+++
  MMETSP1325-20131115|1256_1 711 TLSL----ATELRDQVVQvDVFEKHGVLEQQEGYVRP 743
                 3333....33344555533677899999999988876 PP

>> PF00441.19  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.4   1.3e-14   5.8e-11       3     141 ..     302     443 ..     300     449 .. 0.84
   2 ?   -3.1   0.3       1.5   6.7e+03      66     106 ..     565     608 ..     556     610 .. 0.59

  Alignments for each domain:
  == domain 1    score: 42.5 bits;  conditional E-value: 1.3e-14
                 -...-HHHHHHHHHH--------HHHHHHH.HHHHHHH-------GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTS-HHHHHHHHHHHHHHHHHHHHHHHHH---GGGBTTSS..HHHHHHHHTTTTT-------H CS
  PF00441.19   3 GfavametlnheRlliaaaalglarralee.aleyakqrkafgkplidfqlireklaemaaeleaarllvyraaealdagkpdsaeaslaKllaselaqevadeamqllGgrGyaeeyp..lerlyrdarvlrigeGtseiq 141
                 G++  +e l  +R +   a  + a+r l+  + +y++ rk+f+ p+++f +i+e la+m ++   + + +    + +d+++ + + +s++K  +++  ++++ + m+++Gg+G+ ++ +    ++y  + ++ + eG++ + 
  MMETSP1325-20131115|1256_1 302 GWKMFVECLAEGRGVSLPAGSASAARTLNTgVGAYCRARKQFKVPIAEFGGIQEALARMGTQGLITVASTDLMNAIIDNHEAPMVLSSIMKQSVTDRGRKIIIDGMDIMGGAGICRGPKnfAGNMYMSVTIAITVEGANIMT 443
                 9************987766666666666661569*************************9996655555555555689999999******************************6555555999999999999999988665 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHC-TTS-...HHHHHHHHHHHHHHHHHHHHHH CS
  PF00441.19  66 aarllvyraaealdagkpd...saeaslaKllaselaqevadea 106
                 +a  l y +++ ++++k     +a++  a l   + aqe+ +ea
  MMETSP1325-20131115|1256_1 565 SAIYLGYAVLWHYQHQKGIeglEAATEHAMLTLEHEAQEALREA 608
                 55567777777777777776444444445555556666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (763 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.13u 0.36s 00:00:01.48 Elapsed: 00:00:01.02
# Mc/sec: 1792.57
//
Query:       MMETSP1325-20131115|1267_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.64
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|1268_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.69
# Mc/sec: 246.58
//
Query:       MMETSP1325-20131115|1269_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.64
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|1270_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.8   0.0       0.12   11.6   0.0    1.1  1  PF12419.3 SNF2 Helicase protein


Domain annotation for each model (and alignments):
>> PF12419.3  SNF2 Helicase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   8.9e-06      0.12      58      97 ..      24      63 ..       5      64 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.9e-06
   PF12419.3 58 aakgksflgldalldfdwelalGdeeLteeEleeLaeskr 97
                ++++ + +++ +ll++ w++ +  e+L + E + L+++kr
  MMETSP1325-20131115|1270_1 24 PRERVGEFSAGDLLACAWQFPITKETLADIEARYLMHKKR 63
                5555678******************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.61
# Mc/sec: 263.21
//
Query:       MMETSP1325-20131115|1261_1  [L=482]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-22   77.2   0.1    1.2e-21   75.6   0.0    1.9  2  PF00240.18 Ubiquitin family
    1.3e-10   40.7   0.0    2.5e-10   39.7   0.0    1.5  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
     0.0026   18.1   0.1      0.044   14.2   0.0    2.6  2  PF08817.5  WXG100 protein secretion system (Wss), protein YukD
  ------ inclusion threshold ------
      0.054   13.5   0.0       0.24   11.4   0.0    2.2  2  PF10302.4  DUF2407 ubiquitin-like domain
       0.11   12.2   0.3        0.4   10.3   0.0    2.1  2  PF12644.2  Protein of unknown function (DUF3782)
       0.13   12.1   0.1       0.65    9.8   0.0    2.2  2  PF01556.13 DnaJ C terminal domain


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   0.0   5.1e-25   1.2e-21       2      69 .]     270     337 ..     269     337 .. 0.96
   2 ?   -3.4   0.0       2.4   5.5e+03      45      55 ..     373     383 ..     368     392 .. 0.49

  Alignments for each domain:
  == domain 1    score: 75.6 bits;  conditional E-value: 5.1e-25
                 ESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
  PF00240.18   2 tlsgktitlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69 
                 tl+gk + ++v +sdtv+ lKe+i+++egip+dqqrLi++ k+LeD+ tlse++++dgs + lvlrlr
  MMETSP1325-20131115|1261_1 270 TLTGKAFRVSVLSSDTVERLKEAIQDAEGIPPDQQRLIHKAKQLEDGYTLSECGVEDGSEMTLVLRLR 337
                 8999*******************************************************999999876 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 2.4
                 ETTTSBTTTTT CS
  PF00240.18  45 LeDdrtlseyn 55 
                   D  +++ ++
  MMETSP1325-20131115|1261_1 373 VSDTLSVANCK 383
                 44544444443 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.0   1.1e-13   2.5e-10       1      71 [.     264     333 ..     264     334 .. 0.96

  Alignments for each domain:
  == domain 1    score: 39.7 bits;  conditional E-value: 1.1e-13
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE CS
   PF11976.3   1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvv 71 
                 i++++++ +gk ++++V +++t++ L+ea ++++gip+ +q+rLi + ++L++  t+ + ++edg++  +v
  MMETSP1325-20131115|1261_1 264 ITVKVTTLTGKAFRVSVLSSDTVERLKEAIQDAEGIPP-DQQRLIHKAKQLEDGYTLSECGVEDGSEMTLV 333
                 799***********************************.**************************987665 PP

>> PF08817.5  WXG100 protein secretion system (Wss), protein YukD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.34   7.7e+02      20      46 ..      95     119 ..      92     131 .. 0.73
   2 !   14.2   0.0   1.9e-05     0.044       4      78 ..     265     332 ..     262     333 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.34
   PF08817.5  20 padlPvrelipalvrllnlpgadasgq 46 
                 pa+ +v+ l++ l ++l +++   s++
  MMETSP1325-20131115|1261_1  95 PAEATVGGLLEQLKQELPDDD--GSEA 119
                 899999999999999765444..3343 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 1.9e-05
   PF08817.5   4 rVtvlagdgrltdlaLpadlPvrelipalvrllnlpgadasgqgqyslapikgapLsldatLddagVvdGdlLvL 78 
                  V v++  g+++ + + +  +v++l +a++++  +p++ +      +l   k   L +  tL+++gV dG+  +L
  MMETSP1325-20131115|1261_1 265 TVKVTTLTGKAFRVSVLSSDTVERLKEAIQDAEGIPPDQQ------RLI-HKAKQLEDGYTLSECGVEDGSEMTL 332
                 4555555567888888888899999999999888888653......488.88899***************98877 PP

>> PF10302.4  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       5.8   1.3e+04      20      40 ..      94     114 ..      91     118 .. 0.80
   2 ?   11.4   0.0   0.00011      0.24      17      68 ..     277     326 ..     263     448 .. 0.79

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 5.8
   PF10302.4  20 spnsltvaeLkrliRerlpgd 40 
                 +p + tv +L +  +++lp+d
  MMETSP1325-20131115|1261_1  94 DPAEATVGGLLEQLKQELPDD 114
                 578899999999999999765 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.00011
   PF10302.4  17 dinspnsltvaeLkrliRerlpgdlsrrrLrlIyaGkvLndesalasdlkee 68 
                  ++  +s tv+ Lk+ i++  +   +  + rlI++ k L+d  +l+++  e+
  MMETSP1325-20131115|1261_1 277 RVSVLSSDTVERLKEAIQDAEGIPPD--QQRLIHKAKQLEDGYTLSECGVED 326
                 5556699************9944444..5589**********9999876665 PP

>> PF12644.2  Protein of unknown function (DUF3782)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00018       0.4      14      59 ..     290     354 ..     269     357 .. 0.76
   2 ?   -2.9   0.1       2.5   5.6e+03       5      16 ..     453     464 ..     437     468 .. 0.54

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00018
   PF12644.2  14 kedLkelearatkedvkrle....................ayinalgarwgvvsEdvfrqGvrell 59 
                 ke ++  e   +++++++++                    ++   l  r g++ E +fr G+ el+
  MMETSP1325-20131115|1261_1 290 KEAIQDAEG-IPPDQQRLIHkakqledgytlsecgvedgsEMTLVLRLRGGMMHESSFRDGFAELM 354
                 444444433.56666666667777777777777777777788888999****************96 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 2.5
   PF12644.2   5 tkqdkafatked 16 
                 t+q + +a+++ 
  MMETSP1325-20131115|1261_1 453 TLQAQLCALEQT 464
                 344444444444 PP

>> PF01556.13  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.1   2.5e+03      15      42 ..     138     165 ..     137     178 .. 0.69
   2 ?    9.8   0.0   0.00028      0.65       4      46 ..     251     290 ..     250     308 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.1
  PF01556.13  15 lGgtvevptldgrkikvkippgtkpgek 42 
                 +Ggt++v  +++  ++ ++ + ++p ++
  MMETSP1325-20131115|1261_1 138 VGGTFTVSVPENAAVSWTVAEAVRPVTE 165
                 6888888888887777777777666544 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00028
  PF01556.13   4 veleislkeAllGgtvevptldgrkikvkippgtkpgeklrik 46 
                 v++e+ +  A  G tv+v+tl g+  +v+   + +++++ r+k
  MMETSP1325-20131115|1261_1 251 VRIEVKPNIASSGITVKVTTLTGKAFRVS---VLSSDTVERLK 290
                 678999******************99998...55555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       551  (0.0403013); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.73
# Mc/sec: 1582.25
//
Query:       MMETSP1325-20131115|1266_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   12.1   8.8         15    5.4   0.0    4.8  5  PF04667.12 cAMP-regulated phosphoprotein/endosulfine conserved region


Domain annotation for each model (and alignments):
>> PF04667.12  cAMP-regulated phosphoprotein/endosulfine conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0    0.0089   1.2e+02      36      43 ..      43      50 ..      39      67 .. 0.87
   2 ?    5.4   0.0    0.0011        15      38      49 ..     131     142 ..     127     185 .. 0.84
   3 ?    2.3   0.0      0.01   1.4e+02      38      54 ..     196     212 ..     194     230 .. 0.70
   4 ?    0.4   1.0     0.041   5.6e+02      38      56 ..     247     265 ..     245     275 .. 0.57
   5 ?    2.6   0.1    0.0088   1.2e+02      39      55 ..     264     280 ..     257     291 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.0089
  PF04667.12 36 kYFDSGDY 43
                k FDS+DY
  MMETSP1325-20131115|1266_1 43 KRFDSADY 50
                56****** PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0011
  PF04667.12  38 FDSGDYalaKak 49 
                 FDS+DY la + 
  MMETSP1325-20131115|1266_1 131 FDSADYMLADSS 142
                 ******998665 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.01
  PF04667.12  38 FDSGDYalaKakgsksq 54 
                 FDS+D  ++   + +++
  MMETSP1325-20131115|1266_1 196 FDSADHVMNSHLANTKA 212
                 9*****99866554443 PP

  == domain 4    score: 0.4 bits;  conditional E-value: 0.041
  PF04667.12  38 FDSGDYalaKakgsksqkl 56 
                 FDS+D+   +a   +s+++
  MMETSP1325-20131115|1266_1 247 FDSADFYKGQASTRQSEDS 265
                 7777776555555555544 PP

  == domain 5    score: 2.6 bits;  conditional E-value: 0.0088
  PF04667.12  39 DSGDYalaKakgsksqk 55 
                 DSGD + a+a ++ + +
  MMETSP1325-20131115|1266_1 264 DSGDMQVARASAQGDPD 280
                 9*********9976655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.72
# Mc/sec: 1011.80
//
Query:       MMETSP1325-20131115|1275_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 247.90
//
Query:       MMETSP1325-20131115|1276_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.64
# Mc/sec: 381.92
//
Query:       MMETSP1325-20131115|1277_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.60
# Mc/sec: 191.71
//
Query:       MMETSP1325-20131115|1274_1  [L=686]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.4e-95  318.7  23.9      2e-44  151.8  11.1    3.1  3  PF10243.4 Microtubule-binding protein MIP-T3
  ------ inclusion threshold ------
       0.03   13.5   6.6       0.06   12.5   4.6    1.4  1  PF12795.2 Mechanosensitive ion channel porin domain
       0.21   11.6   5.7       0.47   10.4   4.0    1.6  1  PF08702.5 Fibrinogen alpha/beta chain family
       0.59   10.3   8.9       0.97    9.6   6.1    1.3  1  PF13476.1 AAA domain
        6.9    7.0   8.4         11    6.3   3.1    2.9  2  PF04102.7 SlyX


Domain annotation for each model (and alignments):
>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.1   2.3e-26   6.4e-23       3     141 ..      76     218 ..      74     224 .. 0.93
   2 !   92.1   0.4   8.8e-30   2.4e-26       2     104 ..     293     398 ..     292     424 .. 0.88
   3 !  151.8  11.1   7.5e-48     2e-44     254     536 ..     391     681 ..     387     683 .. 0.70

  Alignments for each domain:
  == domain 1    score: 80.8 bits;  conditional E-value: 2.3e-26
   PF10243.4   3 GlYtd..aelksdnvkdkdaKiaFLqklIdvvklvtgeelavkpakIVAGqEpErTNeLLQalakcaes..klssdeaVkrvLagekgeskgkaaktsrakeekneskkeeekrkekkkeekkkkeekekeeekerkqkeelk 141
                 GlY d  + ++++++kdk aK+++L+++I  v l tg   a+k+ k+VAG+EpE+TN+ LQ+la +a+s  + +s++ V r++age+ ++ +k  +  ++ +++  ++k eek++++ ++ k ++ + + ++   r+ k+e+ 
  MMETSP1325-20131115|1274_1  76 GLYEDrpDLQNGKEIKDKGAKLEYLERIIRCVGLYTGVATAIKAGKVVAGLEPENTNKWLQQLAAAATSvdAGKSADCVARAIAGEEPGADAKGGDDDKPTAPPAAEEKAEEKGADEPAPAKDDAGKPPASRGGGRQTKDEAG 218
                 8887744789**********************************************************99778999*******************************************************999998888765 PP

  == domain 2    score: 92.1 bits;  conditional E-value: 8.8e-30
   PF10243.4   2 kGlYtdaelksdnvkdkdaKiaFLqklIdvvklvtgeelavkpakIVAGqEpErTNeLLQalakcaesklssdeaVkrvLagekge...skgkaaktsrakeekne 104
                  GlY  +el+++ +k+k aKia+L+k+I++v +v  + +  kpak+VAG+EpE+TN LLQ+la +a+++ +s+eaV+ vL+g +++   ++++aa+t++ake +  
  MMETSP1325-20131115|1274_1 293 AGLYEGEELDGKGMKEKGAKIAYLEKIIKLVGVVLNTLVDTKPAKVVAGLEPENTNRLLQLLAVAAKNAPDSTEAVQTVLSGGGAApapKPAPAADTAPAKEDAAP 398
                 69******************************************************************************99876522267778888888887654 PP

  == domain 3    score: 151.8 bits;  conditional E-value: 7.5e-48
   PF10243.4 254 sekkaeseveaskseekktekeskaeaeqeakakasksktkktnskeevq..rertslrrpsarpasARpapPRvKrknveivlqndrqksgkivsnvileskk.........sededdeqfvviaaaqaseiaeeeaeealeleeeekqGgLvqkiletkkelekqsasaeqgekersl............saakkerdssareieklresiQtLtksanPLgKlldfiqeDidaMqrELemWrseyrqqaealqkerraTeealeplkaqLaeleqsIkdqedkidnvraniLkNeekiqkllk 536
                 ++k++++  +a++++  +  ++ +a+++++ak +++k +  ++ s +  +   +     ++s rp +AR  pP+vK+       q +++++g+++++    +           ++ +d+e+       ++ e  ++  ++a  + ++e   +Lv+ i+++ k+ + +++ ++++  +  +             ++ ++   s+ +ie+lr+ +Q+L+ks+nPLgK +d+++eD+ +M++EL++W+ e+r++  +l+ er++Teeal plk qL el+++ k+q  ki++++a+i kN+++i+++l+
  MMETSP1325-20131115|1274_1 391 PAKEDAAPAAAPAKDDATPAASMAAAPQTGAKDDDEKFTGGEAASGAAAAggDDMGAEPKRSMRPTTARRRPPKVKDNV----KQLEQAGVGGTKADGAAGATPvgimvdgddKDSDDEEE-------KKGEDDAGFGATA--ADGGES--KLVKDIMNEAKDAKGEAEPEKKDDGKGGIrlnrskkkasasTKKSGMSSWSQADIEQLRQAVQQLCKSTNPLGKCMDYVHEDLSSMNKELDRWQAENRRKVDELETERATTEEALAPLKLQLVELDEQLKEQVIKINSMKAKIVKNDQRIEQILQ 681
                 4444554555555555555566666666777777666666666554444311566778999***************933....33455555555443333333344442211044444442.......2222223333332..344444..69*****9999988776666533333323558888888763344445788999**************************************************************************************************9876 PP

>> PF12795.2  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   4.6   2.2e-05      0.06      32     132 ..     580     679 ..     576     683 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.2e-05
   PF12795.2  32 eikkskqkadqyqkiiddapkelrelrqelealksaeeavkqelanlslsqLeqelaqtssqLqelqeqlqqensqlielqtrperaqqqlsearrrlqei 132
                 +i++ +q  +q+ k+ +   k ++ + + l++++++  +  q  ++ ++++Le+e a+t+++L+ l+ ql + ++ql+e+   ++   + + ++++r+++i
  MMETSP1325-20131115|1274_1 580 DIEQLRQAVQQLCKSTNPLGKCMDYVHEDLSSMNKE-LDRWQAENRRKVDELETERATTEEALAPLKLQLVELDEQLKEQVIKINSMKAKIVKNDQRIEQI 679
                 788889999999999999999999999999999776.8888899999*****************************************************9 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.0   0.00017      0.47      35     132 ..     578     674 ..     571     682 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00017
                 CHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  35 dkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLqevlrsneskiqrLeqdiaqker 132
                 + +ie+l++ ++ql ++t+   + +  + e+l +  k+    ++   +  ++le++   + e+     + q+ +L e+l++++ ki  ++ +i++ ++
  MMETSP1325-20131115|1274_1 578 QADIEQLRQAVQQLCKSTNPLGKCMDYVHEDLSSMNKELDRWQAENRRKVDELETER-ATTEEALAPLKLQLVELDEQLKEQVIKINSMKAKIVKNDQ 674
                 579***************************999999997777777778888999999.888999999999**********************998765 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.1   0.00035      0.97      69     197 ..     537     679 ..     496     683 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00035
   PF13476.1  69 gkkkayvelsfeddkgrektylieeerektkkkgkkvkkeilelleideleqfleellksdke........ilpliaylgqerekekfklkekkkrleelekeleeledeke..llekl.......lqeeekekeleeleeeleel 197
                 ++ k ++e + +dd+++    ++ ++++k + ++kk+  +  ++ +i++l+q +++l ks+++          +l ++ ++ +  ++ ++++k ++le  +   ee+ +  +  l e         ++ +++++++ +  +++e++
  MMETSP1325-20131115|1274_1 537 KDAKGEAEPEKKDDGKG--GIRLNRSKKKASASTKKSGMSSWSQADIEQLRQAVQQLCKSTNPlgkcmdyvHEDLSSMNKELD-RWQAENRRKVDELETERATTEEALAPLKlqLVELDeqlkeqvIKINSMKAKIVKNDQRIEQI 679
                 33444455555553333..4677778888888888888889999999**************9977777666556666666666.88888877777666665555555553331122222001111244455555555555555555 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1      0.16   4.4e+02      20      57 ..     581     617 ..     577     625 .. 0.76
   2 ?    6.3   3.1    0.0041        11       4      50 ..     625     671 ..     622     680 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.16
   PF04102.7  20 ieeLNevvaeqqkeidrlqrqlrllaerlkeleessne 57 
                 ie+L ++v +  k    l + +++++e l +++ ++ +
  MMETSP1325-20131115|1274_1 581 IEQLRQAVQQLCKSTNPLGKCMDYVHEDLSSMN-KELD 617
                 889999999999999999999999999999988.4434 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0041
   PF04102.7   4 erieeLEiklafqedtieeLNevvaeqqkeidrlqrqlrllaerlke 50 
                  +++eLE++ a +e+++  L  +++e +++++++  +++ ++ ++ +
  MMETSP1325-20131115|1274_1 625 RKVDELETERATTEEALAPLKLQLVELDEQLKEQVIKINSMKAKIVK 671
                 689*****************************999999999988755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       939  (0.0686805); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.21u 0.36s 00:00:01.56 Elapsed: 00:00:01.01
# Mc/sec: 1627.62
//
Query:       MMETSP1325-20131115|1273_1  [L=394]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-50  170.9   0.0    4.3e-24   85.0   0.0    2.4  3  PF10275.4  Peptidase C65 Otubain
    0.00014   22.3   0.0     0.0095   16.3   0.0    2.8  1  PF02338.14 OTU-like cysteine protease


Domain annotation for each model (and alignments):
>> PF10275.4  Peptidase C65 Otubain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.52   3.6e+03     113     136 ..      45      69 ..      29      80 .. 0.47
   2 !   83.3   0.0   2.2e-27   1.5e-23       4     151 ..      85     235 ..      82     242 .. 0.86
   3 !   85.0   0.0   6.3e-28   4.3e-24     146     243 ..     293     391 ..     281     392 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 0.52
   PF10275.4 113 eskeeeseeee.ellkafndqeqsd 136
                 +s e ++ +e+ +   ++++q++++
  MMETSP1325-20131115|1273_1  45 NSAEATKAAEDaARQAQIDEQQKQN 69 
                 4444444444433333333333333 PP

  == domain 2    score: 83.3 bits;  conditional E-value: 2.2e-27
   PF10275.4   4 kqrplvsekeplsaLakeyaka.dpaylkkikelkekysgirrvrgDGnCfYrafafsyleiLlekkdde......everfierieklkealkalgideelvedfleeflellkkleskeeeseeeeellkafndqe.qsdyivvflRlltsaeik 151
                 +++ lv+ ke++ +L  ey+ +  p + + +++l+++y+++rrvrgDGnCfYr+f+f++le L++k++ +      e  +f+e+++ + ++l  +g+d++ +e+f ee++e l+kl +++       +l  +f++++  ++y+v ++R l ++++k
  MMETSP1325-20131115|1273_1  85 AENLLVNVKENVDVLFPEYKGNpRPGFMSGLEDLNQRYESLRRVRGDGNCFYRCFLFGFLEELIRKRSVDlasaeaERVAFLETVRGSIDDLVTVGYDKNAIEMFWEELVEALEKLPDTDAA-----ALEATFQEENgVAEYMVWYCRALCAGFMK 235
                 45567999*************99*********************************************9967664444457777778888888************************76653.....688888876625788******98887766 PP

  == domain 3    score: 85.0 bits;  conditional E-value: 6.3e-28
   PF10275.4 146 tsaeikenadeykpfideld......lltveefCeqeVepvnkeadnvqikaLaealgipvrveyldrsvegeevnehefpeeseekapkItLLyrPgHYdIly 243
                 + + +++n d++ pfi +ld       l++  fC++eVep+++e+++++i+aL+ealg++v +eyld s+ +  + +       e ++p ItLLyrPgHYdIly
  MMETSP1325-20131115|1273_1 293 YFSRLQRNPDRFLPFILSLDdgdgtaCLDIVTFCAREVEPMGRECEQIHIIALCEALGVSVAIEYLDGSSGPLACLTLP-----EGREPAITLLYRPGHYDILY 391
                 56789*************999**********************************************994444444443.....4799***************9 PP

>> PF02338.14  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.4e-06    0.0095       1     115 [.     129     382 ..     129     387 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.4e-06
                 -----HHHHHHHHHH-----HHHHHHHHHHSS--HHHH.............................................-------------............-HHH......................................................................................................................................HHHHHHHHHHHTS-EEE..-----------------B--TTS-GGGS--S CS
  PF02338.14   1 pgDGnCLfhavsqqlwldhdgrkekheelrealveylr.............................................ehrelfeefleeeeeeYlkeiskdgewge......................................................................................................................................eieifalahilrrpiiv..lkssggealvyikfggkylplekppsiclss 115
                 +gDGnC+++++ +++   ++        +r++ v+                                                +                           +                                                                                                                                      +i+i al++ l++ + +  l     +  ++  + +  lp+  +p i l++
  MMETSP1325-20131115|1273_1 129 RGDGNCFYRCFLFGFL--EE-------LIRKRSVDLASaeaervafletvrgsiddlvtvgydknaiemfweelvealeklpdT---------------------------DaaaleatfqeengvaeymvwycralcagfmkvgatrtyakrkhvrhltragtdtgwagxtspqtaetlvichtwspardfdlahttatyfsrlqrnpdrflpfilslddgdgtacldivtfcarevepmgreceQIHIIALCEALGVSVAIeyL----DGSSGPLACLT--LPEGREPAITLLY 382
                 69*********99996..22.......555555444433322222555555655565556644444444444333333333333...........................03444455555666666666666777777788888888999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999432....33334444433..5566666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1072  (0.0784084); expected 273.4 (0.02)
Passed bias filter:                      640  (0.046811); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.42s 00:00:01.28 Elapsed: 00:00:00.97
# Mc/sec: 973.37
//
Query:       MMETSP1325-20131115|1280_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.76
# Mc/sec: 362.61
//
Query:       MMETSP1325-20131115|1283_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-15   54.6   6.9      1e-14   53.9   4.8    1.4  1  PF13639.1  Ring finger domain
    1.3e-12   47.2   5.6    2.2e-12   46.4   3.9    1.4  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    2.5e-09   37.0   3.8    4.6e-09   36.1   2.6    1.4  1  PF12678.2  RING-H2 zinc finger
    2.5e-09   36.5   4.5    4.5e-09   35.7   3.1    1.4  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    2.8e-07   29.9   7.8    5.7e-07   28.9   5.4    1.6  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    5.7e-05   22.8   0.5    0.00013   21.7   0.3    1.5  1  PF05883.6  Baculovirus U-box/Ring-like domain
    8.6e-05   22.1   1.3     0.0002   20.9   0.9    1.7  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
    0.00012   21.5   1.1    0.00029   20.2   0.7    1.7  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    0.00058   19.7   4.6     0.0013   18.6   3.2    1.6  1  PF12906.2  RING-variant domain
     0.0081   15.9   5.8       0.14   11.9   4.9    2.4  2  PF11793.3  FANCL C-terminal domain
  ------ inclusion threshold ------
      0.059   13.2   3.5       0.34   10.8   2.0    2.3  2  PF08746.6  RING-like domain
      0.078   12.3   3.4       0.14   11.6   2.4    1.4  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
      0.083   12.3   3.6       0.15   11.4   2.5    1.3  1  PF13901.1  Domain of unknown function (DUF4206)
       0.12    9.9   4.3       0.16    9.5   3.0    1.1  1  PF11145.3  Protein of unknown function (DUF2921)
       0.15   11.1   0.5       0.21   10.6   0.4    1.1  1  PF04641.7  Replication termination factor 2


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   4.8   1.1e-17     1e-14       2      45 ..     190     236 ..     189     237 .. 0.95

  Alignments for each domain:
  == domain 1    score: 53.9 bits;  conditional E-value: 1.1e-17
   PF13639.1   2 eCaiCldelse...geevvrlpCgHvfHeeCldewlrssnsCPlCrk 45 
                 eC+iC++ +++   +++  ++pC HvfHeeCl++w++++ +CP+Cr+
  MMETSP1325-20131115|1283_1 190 ECVICYSAIEThpsKRDSFTTPCDHVFHEECLKRWMEQKMECPVCRA 236
                 8********8899999999***************************7 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   3.9   2.4e-15   2.2e-12       4      45 ..     190     235 ..     187     236 .. 0.93

  Alignments for each domain:
  == domain 1    score: 46.4 bits;  conditional E-value: 2.4e-15
   PF13923.1   4 sCpiCleelen......pviltpCgHlyCkkCieqwlekskkkCPiCr 45 
                 +C+iC++  e         ++tpC H+++++C+++w+e+ k +CP+Cr
  MMETSP1325-20131115|1283_1 190 ECVICYSAIEThpskrdS-FTTPCDHVFHEECLKRWMEQ-KMECPVCR 235
                 8********999999965.78******************.*******9 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   2.6   5.1e-12   4.6e-09      21      75 .]     190     235 ..     176     235 .. 0.76

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 5.1e-12
   PF12678.2  21 nCaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrktCPlcr 75 
                 +C+iC +++e +       +k+d+ +     C H+FH +C+++W++++ +CP+cr
  MMETSP1325-20131115|1283_1 190 ECVICYSAIETHP------SKRDSFT---TPCDHVFHEECLKRWMEQKMECPVCR 235
                 5********3333......3234333...35***********************8 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   3.1   4.9e-12   4.5e-09       3      45 ..     189     236 ..     187     239 .. 0.88

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 4.9e-12
   PF13920.1   3 ktCvvCler......eadvlllpCgHlclCeeCaerllkrkkkCpiCrs 45 
                  +Cv+C++       ++d + +pC H+ + eeC +r++++k++Cp+Cr+
  MMETSP1325-20131115|1283_1 189 VECVICYSAiethpsKRDSFTTPCDHV-FHEECLKRWMEQKMECPVCRA 236
                 58******5545555899*********.********************8 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   5.4   6.2e-10   5.7e-07       1      41 []     191     234 ..     191     234 .. 0.97

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 6.2e-10
                 -TTTSSS-SSEE......BSCTS-EE-CHHHHHHHCST-----TTT CS
  PF00097.20   1 CpiCleeakepn.....elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC + ++++       +++C+H f+++C++++++  +k +CP+C
  MMETSP1325-20131115|1283_1 191 CVICYSAIETHPskrdsFTTPCDHVFHEECLKRWME--QKMECPVC 234
                 9*********999***********************..9999**** PP

>> PF05883.6  Baculovirus U-box/Ring-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.3   1.4e-07   0.00013      17      75 ..     179     234 ..     170     237 .. 0.82

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 1.4e-07
   PF05883.6  17 lfkelfkevsveCaiCldeieenkGvvavtekgtldleklfhkeClkrfkrekkrDPfk 75 
                  + e  +e+ veC iC+++ie++       ++ t   +++fh+eClkr+ ++k + P  
  MMETSP1325-20131115|1283_1 179 SVLESAEESGVECVICYSAIETHP---SKRDSFTTPCDHVFHEECLKRWMEQKMECPVC 234
                 5566677889************44...567889999*************8888777765 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.9   2.2e-07    0.0002      51      80 ..     211     237 ..     186     240 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 2.2e-07
   PF12861.2  51 kckhnfhlhcilkwletetskglcpmcrqt 80 
                  c+h+fh+ c+ +w+e+   k  cp+cr +
  MMETSP1325-20131115|1283_1 211 PCDHVFHEECLKRWMEQ---KMECPVCRAA 237
                 5**************98...578****976 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.7   3.2e-07   0.00029      13      57 ..     191     232 ..     184     238 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 3.2e-07
                 -TTT-S.-SS........EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
   PF13445.1  13 Cpiske.qsteqnp....PvvLpCGhvisrealeklakggrsnkgrfkCP 57 
                 C i+     t  +p    +++ pC hv+ +e+l+++++      +++ CP
  MMETSP1325-20131115|1283_1 191 CVICYSaIET--HPskrdSFTTPCDHVFHEECLKRWME------QKMECP 232
                 6666664433..4422336779***************9......499999 PP

>> PF12906.2  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   3.2   1.4e-06    0.0013       1      47 []     191     234 ..     191     234 .. 0.90

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 1.4e-06
                 ETTTTEE-----......---------TTS--HHHHHHHHHHHT-SB-S-- CS
   PF12906.2   1 CriCleeeeese....plirpCkCkGslklvHesCleeWlkesaktkCelC 47 
                 C+iC+ + e+++    ++ +pC      +++He+Cl++W++  +k++C +C
  MMETSP1325-20131115|1283_1 191 CVICYSAIETHPskrdSFTTPCD-----HVFHEECLKRWME--QKMECPVC 234
                 9****999988889999999997.....79**********9..77889999 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.1   4.6e+03      24      37 ..      83      97 ..      74      99 .. 0.57
   2 !   11.9   4.9   0.00016      0.14       3      46 ..     189     230 ..     187     239 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 5.1
                S-TT.----B-SGGG CS
   PF11793.3 24 dnek.CnkkfHaaCL 37
                + ++   ++fH++ L
  MMETSP1325-20131115|1283_1 83 NAIQeTRQPFHKVYL 97
                444314567777655 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00016
                 -S-SSS--SS--------B--S-TT----B-SGGGHHHHHHHH- CS
   PF11793.3   3 veCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrslke 46 
                 veC iCy+    +   ++     + C + fH++CLk W+++ +e
  MMETSP1325-20131115|1283_1 189 VECVICYSAIETH--PSKRDSFTTPCDHVFHEECLKRWMEQKME 230
                 79*****988722..2233334578**************98765 PP

>> PF08746.6  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.1   9.6e+02       5      15 ..      93     103 ..      93     105 .. 0.89
   2 ?   10.8   2.0   0.00038      0.34      18      43 .]     211     234 ..     207     234 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 1.1
   PF08746.6   5 keiviqgvrCg 15 
                 +++ ++g++C+
  MMETSP1325-20131115|1283_1  93 HKVYLYGISCT 103
                 78999*****8 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00038
   PF08746.6  18 dCeiklHvdClkkyirhrskkrCpsC 43 
                  C+  +H +Clk+ + ++    Cp C
  MMETSP1325-20131115|1283_1 211 PCDHVFHEECLKRWMEQKM--ECPVC 234
                 59************99888..5**99 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.4   0.00015      0.14      28      56 ..     210     234 ..     181     235 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00015
                 S----EEEHHHHHHHHTTT--B------- CS
   PF11789.3  28 kkCnHvFEkeaIlkmlkrkkkvkCPvaGC 56 
                 + C HvF +e + + +  ++k++CPv  C
  MMETSP1325-20131115|1283_1 210 TPCDHVFHEECLKRWM--EQKMECPV--C 234
                 38**************..999*****..7 PP

>> PF13901.1  Domain of unknown function (DUF4206)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.5   0.00016      0.15     149     196 ..     185     235 ..     181     238 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00016
   PF13901.1 149 aakgfiCelCkeeelifpfqeekvsrCeeCkavfHkeCle.....kseCpkce 196
                 +++g+ C +C +    +p +++  s  + C +vfH+eCl+     k eCp c+
  MMETSP1325-20131115|1283_1 185 EESGVECVICYSAIETHPSKRD--SFTTPCDHVFHEECLKrwmeqKMECPVCR 235
                 578999*****99888888886..55679**********988765578**996 PP

>> PF11145.3  Protein of unknown function (DUF2921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.0   0.00017      0.16     804     908 ..      66     162 ..      51     163 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00017
   PF11145.3 804 sYvGLvldgFLLPQvilNalsrvrlkplsalfYvGvtlvrllPhvYdllraseyvpvlrdesfiyanpkadffskawDvviplvAvllAlliFlQQRwggailir 908
                 +Y+ L+   + +PQ++ Na+ + r +p  +++  G++  rl+   Y +  + + v+v+   + ++a +    + +   v ++ +++    ++ lQQ++g +++i+
  MMETSP1325-20131115|1283_1  66 NYIVLLAYSYWIPQIVTNAIQETR-QPFHKVYLYGISCTRLVIPLYIYGFPDHLVNVFL-GEKQFAPN----Y-TMCLVLVLWTGAQVG-MLMLQQKFGPRFFIP 162
                 78889999999********98766.8****************99**********99999.55555543....2.334466666666654.456888888877765 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.4   0.00023      0.21     119     159 ..     196     237 ..     177     239 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00023
   PF04641.7 119 tglelngktkfvalrkcGcVfsekalkevk.eekvCpvCnke 159
                 +++e     +  +  +c +Vf e+ lk    ++  CpvC ++
  MMETSP1325-20131115|1283_1 196 SAIETHPSKRDSFTTPCDHVFHEECLKRWMeQKMECPVCRAA 237
                 566777788888999*************9844455****875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       576  (0.0421299); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.64
# Mc/sec: 902.38
//
Query:       MMETSP1325-20131115|1284_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.71
# Mc/sec: 330.76
//
Query:       MMETSP1325-20131115|1279_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 971.38
//
Query:       MMETSP1325-20131115|1278_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   13.2   0.2      0.093   12.8   0.1    1.2  1  PF01890.11 Cobalamin synthesis G C-terminus
      0.074   12.8   0.6      0.081   12.7   0.4    1.1  1  PF06663.8  Protein of unknown function (DUF1170)
       0.65    8.2   3.7       0.76    8.0   2.6    1.0  1  PF03961.8  Protein of unknown function (DUF342)


Domain annotation for each model (and alignments):
>> PF01890.11  Cobalamin synthesis G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1     2e-05     0.093      42      79 ..      23      58 ..      13      69 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2e-05
  PF01890.11 42 dlKadepgllelaeelglplrtfsaeeLaevervptpS 79
                d+K +e+ + + +++++++lr++s+e+++++e    +S
  MMETSP1325-20131115|1278_1 23 DIKHNEEFVETHMKKVQVKLRLLSKEQIDAIE--NDRS 58
                99***************************999..3333 PP

>> PF06663.8  Protein of unknown function (DUF1170)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   1.8e-05     0.081     131     173 ..      40      82 ..      18      88 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.8e-05
   PF06663.8 131 sLlRylsneriavieEesasppyllsreskertlkrskkksak 173
                   lR ls e+i +ie + + +  + ++e++e +  r +k+ ++
  MMETSP1325-20131115|1278_1  40 VKLRLLSKEQIDAIENDRSEHFIRAQKELEEWEEERERKRQQT 82 
                 558****************************999999998765 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.6   0.00017      0.76     329     397 ..      14      81 ..       7      88 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00017
   PF03961.8 329 epelkeklkeleeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleae 397
                   +lk + ++++ + e +e +++k++ kl++l+k ++ +++e +++e + ++++++e+ +ee e  +++
  MMETSP1325-20131115|1278_1  14 LRSLKCEEHDIKHNEEFVETHMKKVQVKLRLLSK-EQIDAIENDRSEHFIRAQKELEEWEEERERKRQQ 81 
                 456777778999999999****************.677889******************9999887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1241  (0.0907695); expected 273.4 (0.02)
Passed bias filter:                      668  (0.048859); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.82
# Mc/sec: 271.78
//
Query:       MMETSP1325-20131115|1287_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.41s 00:00:00.69 Elapsed: 00:00:00.73
# Mc/sec: 160.85
//
Query:       MMETSP1325-20131115|1285_1  [L=509]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.6e-105  352.6   0.0     2e-105  352.3   0.0    1.1  1  PF00285.16 Citrate synthase


Domain annotation for each model (and alignments):
>> PF00285.16  Citrate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  352.3   0.0  1.5e-109    2e-105       1     356 []      66     448 ..      66     448 .. 0.96

  Alignments for each domain:
  == domain 1    score: 352.3 bits;  conditional E-value: 1.5e-109
                 ----------SSEEE------EEE---BHHHHHH.H--..........HHHHH.HHHH------HHHHHHHHHHHHHT----TTT---GGGS-S---HHHHHHHHHS----.............------HHHHHHHHHHHHHHHHHHHHHHHH---------TTS-HHHHHHHHH..----..-TTHHHHHHHHHHHS--.SS-HHHHHHHHHHTTT--HHHHH---------------TTTHHHHHHH-.......--...GGGHHHHHHHHHHHT---------S-SS--HHHHHHHHHHHHH-TT...-HHHHHHHHHHHHHHHT.TGG.G...----HHHHHHHHHHH----G.GGHHHHHHHHHT---HHHHHHHHT.T------ CS
  PF00285.16   1 GlegvvaaeteissidgekgkllYrGydiedlae.kss..........feeva.ylLltgelptkeeleefkeelaerrelpeevakvikalpksahpmavlraavsalaaydke.......eekdesaeevlekalrliaklptiaaaiyrarkgkepiepdpelsyaenflymlgakgeepseeeaealdlalilhaDH.glnaSTftarvvaStlsdlysavsaaigaLkGplHGgAneevlkmleei.......gs...eeeveeyiekaldkgerimGfGHrvYkteDPRakilkelaeelaaekgddellelaekleevaledlkek.k...lypNvDfysgvvlkalgipe.elftplFavsRvvGwlAhvieqleknnkiiRP 356
                 G ++v+++ +e+s +d++ g +++rGy+i +l++  +s          ++e++ +lLltge+ptke+ +e+++el++r++lp++v+ +i++lpk++hpm++++ +++a ++ +k+         k +++e+++e+++ +iaklp iaa +yr +  + ++ +d +l+y  nf +mlg++    +e + e+++l++++h DH g+naS++t+++v+Stlsd+y +++a+++aL+GplHG+An+evl++++++       g+    e++++y +++l+++++i+G+GH+v++++DPR+++++e+a  l+ ++ ddel++++e++++v++ +l+e+ k   +ypNvD +sgv+l +++++e e++t+lF+vsR++G l+++ ++++ + +++RP
  MMETSP1325-20131115|1285_1  66 GARSVKCMLWETSLLDADDG-IRFRGYTIPELQQiLPSfkgpasegepLPEALiWLLLTGEIPTKEQCDELTAELHARSTLPAHVEPLIRSLPKDMHPMSQMAIGLQACQTDSKFakayhdgVPKADYWEYAYEDIIGVIAKLPEIAALVYRCTYYDGVVTKDLSLDYSGNFNRMLGYD----DEGFDELMRLYITIHSDHeGGNASAHTTHLVGSTLSDPYISYVAGLNALAGPLHGLANQEVLRWIQDLvaqfkaeGKeinAETITQYAWDTLNAKRVIPGYGHAVLRKTDPRYTCQREFA--LK-HLPDDELFKMVETIYQVMPGVLTEHgKtknPYPNVDSHSGVLLWHYDFKEyEYYTVLFGVSRATGALSQLFWDRALGLPLERP 448
                 8899****************.*************9999**********888877*********************************************************9999*******99****************************************************775....667*****************************************************************9887665226889***************************************..54.77*******************988844899****************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.84u 0.41s 00:00:01.25 Elapsed: 00:00:00.90
# Mc/sec: 1355.27
//
Query:       MMETSP1325-20131115|1288_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.71
# Mc/sec: 415.14
//
Query:       MMETSP1325-20131115|1290_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.59
# Mc/sec: 666.11
//
Query:       MMETSP1325-20131115|1286_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-36  124.3  10.6    6.6e-36  123.6   7.3    1.3  1  PF09325.5  Vps5 C terminal like
      1e-23   83.1   0.0    2.3e-23   82.0   0.0    1.5  1  PF00787.19 PX domain
    8.7e-09   35.1   9.9    1.2e-08   34.5   6.8    1.2  1  PF03114.13 BAR domain
    0.00011   21.3  10.8      0.011   14.8   1.8    2.5  2  PF10456.4  WASP-binding domain of Sorting nexin protein
  ------ inclusion threshold ------
      0.037   13.7   0.3      0.098   12.4   0.2    1.7  1  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.13   11.4   4.7        0.2   10.8   3.3    1.3  1  PF06730.6  FAM92 protein
        1.2    8.3   6.0         13    4.9   1.3    2.5  2  PF11157.3  Protein of unknown function (DUF2937)


Domain annotation for each model (and alignments):
>> PF09325.5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.6   7.3   3.4e-39   6.6e-36       8     235 ..     171     399 ..     164     400 .. 0.95

  Alignments for each domain:
  == domain 1    score: 123.6 bits;  conditional E-value: 3.4e-39
   PF09325.5   8 ltssvsksatkveEeDewFedkkeeldslesqLkklykalellvsqrkeLasataelakslesLasvelskslsealsqLaeveekikellerqaeqdvltLgetldeylrligsvksvfeqRvklwqqwqeaeselskkkeqleKlkkagksq..qdklqqakkeveelerkveeakkeFedisekikkElerFekervedfknvlekylesaiesqkevielWetfls 235
                 ++   +k  +  +++D  F + ++++++lesq+++++k + ++v+  +eLa+ + e++ + + L++ e + +l +al q++ ++++++ ++++q e+++l ++e + +y+ ++g+vk+++++R++  + +    s+ + k ++leKlk +  +    +k+++a+  ++ +e+  + ak++Fe++s+++ +E++rF +++++d+++v+ +y++ +i+ +k++ + W t+++
  MMETSP1325-20131115|1286_1 171 AMTLSTKLEQVKSDQDITFDEIATYVQNLESQMQNVAKHTAAIVKRGRELAQGLFEFGLAFTLLGQHETE-ALVSALTQMGHTADQLSLIAAEQVEKEQLWFEEPIVDYIQMLGAVKEALAKRQESRKAYFGRVSDKEHKATALEKLKASPDKPgkAEKVTAAEGALTAAEEAEQLAKEHFEEVSARALEEMDRFKQTKADDMRKVVLDYVQLQIQYNKRMEQQWATLVP 399
                 44444555888899******************************************************99.8999**************************************************************************98766669*********************************************************************9987 PP

>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.0   1.2e-26   2.3e-23       6     111 ..      37     144 ..      34     146 .. 0.95

  Alignments for each domain:
  == domain 1    score: 82.0 bits;  conditional E-value: 1.2e-26
                 EEEEEEEEE.CETSSEEEEEEEECS-.....SCEEEEEEEHHHHHHHHHHHHHHTTTSTSTS--TTSSSHHCGTTSHHHHHHHHHHHHHHHHHHHHSCHHHHSHHHHHHHH CS
  PF00787.19   6 vsvleretkgskkhsyylievelktg.....akewtvkRrYsdFeeLhskLlrkfprlklPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrksevltsFLe 111
                 ++v+++ +  ++ +sy+ ++v ++t       ++++v RrYsdF++L++ Ll+  p+ ++PplP+k ++ +   + +ef+e rr++Le++L+r+++hp  +k+e +++FL 
  MMETSP1325-20131115|1286_1  37 IKVSDPIKNAEGLNSYISYKVNTETTleeydYNQFSVIRRYSDFVWLRDTLLKSLPGAIIPPLPEKAVMNR---FAPEFVEGRRRALERFLNRCAEHPLASKNETFKTFLL 144
                 7899999889999*****************999**********************************9987...***********************************95 PP

>> PF03114.13  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   6.8   6.4e-12   1.2e-08      24     227 ..     174     400 ..     165     403 .. 0.78

  Alignments for each domain:
  == domain 1    score: 34.5 bits;  conditional E-value: 6.4e-12
  PF03114.13  24 LDedFeelerrfdtteklikklvkelkeylqanpaarakqivle......qplellaeamieigkelgedsefgkalekygeaekklaqlleqleervesnvldplrellkefkeiqkeikklerkrlDy.......Dakrtrlkklktkkskkak..............eeelrqAkqeyeelneelkeeLpnlleleveflenqlqafveaqldfhkqlaqlleqlqqq 227
                 L+ ++e+++   d+t ++i   v++l+ ++q++ + +a+ +  +      q l +++ a++ +g+   e     +al ++g + ++l+ + ++  e+ +  + +p+  +++++  ++++++k++  r +y         k t l+klk++ +k+ k              ee  + Ak+ +ee ++ + ee++ + +++++ + + + ++v++q+++ k++ q  + l ++
  MMETSP1325-20131115|1286_1 174 LSTKLEQVKSDQDITFDEIATYVQNLESQMQNVAKHTAAIV--KrgrelaQGLFEFGLAFTLLGQHETEALV--SALTQMGHTADQLSLIAAEQVEKEQLWFEEPIVDYIQMLGAVKEALAKRQESRKAYfgrvsdkEHKATALEKLKASPDKPGKaekvtaaegaltaaEEAEQLAKEHFEEVSARALEEMDRFKQTKADDMRKVVLDYVQLQIQYNKRMEQQWATLVPE 400
                 55666666666666666666666666666663333333333..33555555555999999999998877776..***********************9*************************865544432221115556666666655555555****************************************************************99987777665 PP

>> PF10456.4  WASP-binding domain of Sorting nexin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   1.3    0.0001       0.2      55     177 ..     194     307 ..     147     319 .. 0.75
   2 !   14.8   1.8   5.7e-06     0.011     167     228 ..     330     393 ..     307     399 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.0001
   PF10456.4  55 esvkelsevanefakkqagglkkeyqkvGkafkalsqafevdetaasaaLnealaatgktYeeigelfaeqpkkDlepllellaeYkGllanfPDiihvqkgalekvkesdklveegklssee 177
                   v++l++++++ ak++ +++ k  + + + + ++  af++ +++  +aL +al++ g+t ++++ + aeq  k+     e    Y  +l+++       k+al+k +es +++  g++s +e
  MMETSP1325-20131115|1286_1 194 TYVQNLESQMQNVAKHT-AAIVKRGRELAQGLFEFGLAFTLLGQHETEALVSALTQMGHTADQLSLIAAEQVEKEQLWFEEPIVDYIQMLGAV-------KEALAKRQES-RKAYFGRVSDKE 307
                 34667777777776655.556666799********************************************9998877777777777666654.......6666666666.444555555544 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 5.7e-06
   PF10456.4 167 lveegklsse.ekeel.kkrvnvisyallaeinhfhkervrDfksvmqlyLkqqikfyqkvaek 228
                 +++eg l+++ e+e+l k++ + +s   l e++ f++++  D+++v+  y++ qi++ +++ ++
  MMETSP1325-20131115|1286_1 330 TAAEGALTAAeEAEQLaKEHFEEVSARALEEMDRFKQTKADDMRKVVLDYVQLQIQYNKRMEQQ 393
                 2345666544144555267899**********************************99888776 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2     5e-05     0.098      24      62 ..     185     223 ..     171     226 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5e-05
   PF06103.6  24 lkktldevnktvkkltkqvdgitketeellaktnelleD 62 
                  + t+de+++ v++l++q++++ k+t  ++++ +el++ 
  MMETSP1325-20131115|1286_1 185 QDITFDEIATYVQNLESQMQNVAKHTAAIVKRGRELAQG 223
                 45689******************************9986 PP

>> PF06730.6  FAM92 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.3    0.0001       0.2      10     215 ..     186     407 ..     173     409 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.0001
   PF06730.6  10 darvkqlqeavsivekhlgelcqifalvvrktaklrdkadllvkeiksyadteeinlklGlksfadeva..klqdyrdieverl..eakvveelkayetlvk..skrddlklaliar..dkeakrlrqlerlkqk..nssdrhvisqaetelqkakldaqrtskeleei.......idnfekrklkdlkqilsefiliemlfhgkalevltaayqdiqnided 215
                 d     + + v++ e  + ++ +  a++v++   l     ++     +  + e+  l   l ++ +      l    ++e e+l  e+ +v+ ++  + +    +kr + + a   r  dke  + + le+lk     + +   +++ae  l  a+   q ++ ++ee+       +d f++ k  d+++++ +++ +++++  +  + +++   +i++id d
  MMETSP1325-20131115|1286_1 186 DITFDEIATYVQNLESQMQNVAKHTAAIVKRGRELAQGLFEFGLAFTLLGQHETEALVSALTQMGHTADqlSLIAAEQVEKEQLwfEEPIVDYIQMLGAVKEalAKRQESRKAYFGRvsDKEH-KATALEKLKASpdKPGKAEKVTAAEGALTAAEEAEQLAKEHFEEVsaraleeMDRFKQTKADDMRKVVLDYVQLQIQYNKRMEQQWATLVPEIEAIDVD 407
                 445567888899999999999999999999988888888887777777777777777766655544333003445566776665558999999999998854336999999999988444554.4567888776422566666788888888888777777777777654444333799*******************9987665555566666788888866 PP

>> PF11157.3  Protein of unknown function (DUF2937)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1    0.0079        15      62      97 ..     192     227 ..     175     248 .. 0.89
   2 ?    4.9   1.3    0.0067        13      43     102 ..     339     394 ..     330     399 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0079
   PF11157.3  62 iahyrqssdpvvraraesmqalvaRyaaLesalaal 97 
                 ia y q+ +  +++ a++ +a+v+R ++L+++l ++
  MMETSP1325-20131115|1286_1 192 IATYVQNLESQMQNVAKHTAAIVKRGRELAQGLFEF 227
                 78899999999*******************998776 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0067
   PF11157.3  43 vaefqatAkaffggdlealiahyrqssdpvvraraesmqalvaRyaaLesalaalaqasp 102
                  +e ++ Ak++f+   +++++++    d++ +++a++m+++v  y +L+ ++++  ++++
  MMETSP1325-20131115|1286_1 339 AEEAEQLAKEHFEEVSARALEEM----DRFKQTKADDMRKVVLDYVQLQIQYNKRMEQQW 394
                 57889999999999999999999....77999*****************99988766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       903  (0.0660474); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.69
# Mc/sec: 1542.00
//
Query:       MMETSP1325-20131115|1293_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 697.12
//
Query:       MMETSP1325-20131115|1291_1  [L=369]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   20.4   0.0     0.0018   17.7   0.0    2.1  2  PF13833.1  EF-hand domain pair
     0.0021   17.1   0.2      0.013   14.6   0.5    2.1  2  PF00036.27 EF hand
     0.0025   17.4   0.1      0.025   14.3   0.1    2.5  3  PF13405.1  EF-hand domain
     0.0038   17.2   0.0     0.0081   16.1   0.0    1.5  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.038   13.2   0.7      0.096   11.9   0.5    1.7  1  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   6.7e-07    0.0018       4      49 ..      61     105 ..      58     110 .. 0.89
   2 ?    0.1   0.0      0.21   5.7e+02       6      17 ..     117     129 ..     117     137 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 6.7e-07
   PF13833.1   4 lItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcv 49 
                  +t  e++r l++ g++ l+ e   +++r fD ++dG i  +EF++
  MMETSP1325-20131115|1291_1  61 GVTLPEFRRGLRTYGIP-LTYERTGEMYRRFDENDDGQIQMKEFID 105
                 678889***99999999.**************************97 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.21
   PF13833.1   6 treeLkral.all 17 
                 t + ++r++ ++ 
  MMETSP1325-20131115|1291_1 117 TNHKFRRNMsDKN 129
                 7899*****7765 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.93   2.5e+03      17      28 ..      62      73 ..      62      74 .. 0.81
   2 !   14.6   0.5   4.9e-06     0.013       4      26 ..      85     107 ..      83     109 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.93
                BEHHHHHHHHHH CS
  PF00036.27 17 IsfeEfkealkk 28
                +++ Ef++ l++
  MMETSP1325-20131115|1291_1 62 VTLPEFRRGLRT 73
                5788***99986 PP

  == domain 2    score: 14.6 bits;  conditional E-value: 4.9e-06
                 HHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkeal 26 
                 e+ + fD + dG+I  +Ef++++
  MMETSP1325-20131115|1291_1  85 EMYRRFDENDDGQIQMKEFIDIV 107
                 799****************9986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.9   5.1e+03      18      27 ..      63      72 ..      62      75 .. 0.78
   2 !   14.3   0.1   9.3e-06     0.025       5      25 ..      86     106 ..      84     113 .. 0.89
   3 ?   -1.7   0.0       1.3   3.5e+03      13      27 ..     313     327 ..     306     333 .. 0.72

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.9
                ---HHHHHHH CS
   PF13405.1 18 daeELrdaLr 27
                ++ E+r+ Lr
  MMETSP1325-20131115|1291_1 63 TLPEFRRGLR 72
                7789***999 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 9.3e-06
                 --GCC-------B---HHHHH CS
   PF13405.1   5 aFklfDkdgdGkidaeELrda 25 
                  ++ fD + dG+i  +E++d+
  MMETSP1325-20131115|1291_1  86 MYRRFDENDDGQIQMKEFIDI 106
                 6799**************997 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 1.3
                 ----B---HHHHHHH CS
   PF13405.1  13 gdGkidaeELrdaLr 27 
                 +++++   E+r++L+
  MMETSP1325-20131115|1291_1 313 KKNQLVPLEVRQFLS 327
                 556888899999987 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     3e-06    0.0081      21      65 ..      66     106 ..      62     107 .. 0.91

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3e-06
   PF13499.1  21 eLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 e++r l+  g +l+ e + e+     +++D+n dG++++ Ef  +
  MMETSP1325-20131115|1291_1  66 EFRRGLRTYGIPLTYERTGEM----YRRFDENDDGQIQMKEFIDI 106
                 899999999999999999999....*****************876 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.5   3.5e-05     0.096       6      22 ..      88     104 ..      88     107 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.5e-05
                 HHH--S----B-HHHHH CS
   PF13202.1   6 rafDlNgDGkIsreELk 22 
                 r+fD N DG+I ++E+ 
  MMETSP1325-20131115|1291_1  88 RRFDENDDGQIQMKEFI 104
                 68*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.83
# Mc/sec: 1065.37
//
Query:       MMETSP1325-20131115|1294_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.64
# Mc/sec: 909.87
//
Query:       MMETSP1325-20131115|1292_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.67
# Mc/sec: 228.91
//
Query:       MMETSP1325-20131115|1295_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-07   28.6   0.0    1.1e-06   27.9   0.0    1.3  1  PF13833.1  EF-hand domain pair
    1.2e-05   24.1   0.2    0.00042   19.2   0.0    2.5  2  PF00036.27 EF hand
    1.5e-05   24.3   0.0    0.00064   19.3   0.0    2.5  2  PF13405.1  EF-hand domain
    1.9e-05   23.6   0.6    5.7e-05   22.1   0.0    2.1  2  PF13202.1  EF hand
    5.4e-05   23.1   0.0    8.5e-05   22.5   0.0    1.4  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.063   13.2   0.0      0.098   12.5   0.0    1.4  1  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0     5e-10   1.1e-06       8      50 ..      86     127 ..      85     131 .. 0.94

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 5e-10
   PF13833.1   8 eeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvl 50 
                 ee++ral++ g+  +  +++ +lf+ +D++gdG i   EF+++
  MMETSP1325-20131115|1295_1  86 EEFRRALRAYGIL-MPRDQCVALFNSMDANGDGTIQMREFIDV 127
                 8******999***.**************************986 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.051   1.2e+02      19      28 ..      85      94 ..      83      95 .. 0.87
   2 !   19.2   0.0   1.9e-07   0.00042       4      26 ..     106     128 ..     103     130 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.051
                HHHHHHHHHH CS
  PF00036.27 19 feEfkealkk 28
                +eEf++al++
  MMETSP1325-20131115|1295_1 85 YEEFRRALRA 94
                89*****986 PP

  == domain 2    score: 19.2 bits;  conditional E-value: 1.9e-07
                 HHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkeal 26 
                  +F+ +D +gdG+I   Ef++++
  MMETSP1325-20131115|1295_1 106 ALFNSMDANGDGTIQMREFIDVV 128
                 68*****************9987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.081   1.8e+02      20      30 ..      86      95 ..      80      96 .. 0.85
   2 !   19.3   0.0   2.8e-07   0.00064       4      26 ..     106     128 ..     103     140 .. 0.90

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.081
                -HHHHHHH.H- CS
   PF13405.1 20 eELrdaLrksl 30
                eE+r+aLr + 
  MMETSP1325-20131115|1295_1 86 EEFRRALR-AY 95
                8******9.65 PP

  == domain 2    score: 19.3 bits;  conditional E-value: 2.8e-07
                 ---GCC-------B---HHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaL 26 
                 ++F+ +D +gdG+i   E++d+ 
  MMETSP1325-20131115|1295_1 106 ALFNSMDANGDGTIQMREFIDVV 128
                 79******************975 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.71   1.6e+03      19      23 ..      86      90 ..      85      92 .. 0.77
   2 !   22.1   0.0   2.5e-08   5.7e-05       3      24 ..     106     127 ..     105     129 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.71
                HHHHH CS
   PF13202.1 19 eELkr 23
                eE++r
  MMETSP1325-20131115|1295_1 86 EEFRR 90
                89*98 PP

  == domain 2    score: 22.1 bits;  conditional E-value: 2.5e-08
                 HHHHHH--S----B-HHHHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkrl 24 
                 ++F+ +D+NgDG+I + E+  +
  MMETSP1325-20131115|1295_1 106 ALFNSMDANGDGTIQMREFIDV 127
                 68****************9765 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   3.7e-08   8.5e-05      19      64 ..      85     126 ..      71     128 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 3.7e-08
   PF13499.1  19 keeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64 
                 +ee++r+l++ g  + +++   +    f+ +D ngdG++++ Ef  
  MMETSP1325-20131115|1295_1  85 YEEFRRALRAYGILMPRDQCVAL----FNSMDANGDGTIQMREFID 126
                 79**********88888888888....*****************75 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   4.3e-05     0.098      82     111 ..      97     125 ..      67     127 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.3e-05
   PF10591.4  82 plvklehCikeffksCDadkdkkisleEWc 111
                  l++ ++C++ +f+s Da+ d++i+++E+ 
  MMETSP1325-20131115|1295_1  97 ILMPRDQCVA-LFNSMDANGDGTIQMREFI 125
                 5899****96.77999************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 666.62
//
Query:       MMETSP1325-20131115|1296_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 615.62
//
Query:       MMETSP1325-20131115|1297_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.8   0.0       0.18   11.2   0.0    1.2  1  PF09976.4 Uncharacterized protein conserved in bacteria (DUF2133)


Domain annotation for each model (and alignments):
>> PF09976.4  Uncharacterized protein conserved in bacteria (DUF2133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.3e-05      0.18       9      26 ..      98     115 ..      93     116 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.3e-05
   PF09976.4   9 wWkryGkwiivgavlala 26 
                  ++++G++i +g+v++l+
  MMETSP1325-20131115|1297_1  98 VLDENGRLIFGGVVVLLV 115
                 578*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       794  (0.0580749); expected 273.4 (0.02)
Passed bias filter:                      648  (0.0473961); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.84
# Mc/sec: 368.01
//
Query:       MMETSP1325-20131115|1299_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.76
# Mc/sec: 394.14
//
Query:       MMETSP1325-20131115|1302_1  [L=487]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.78u 0.36s 00:00:01.14 Elapsed: 00:00:00.68
# Mc/sec: 1716.21
//
Query:       MMETSP1325-20131115|1298_1  [L=548]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-22   77.6   0.0    1.5e-21   76.4   0.0    1.7  1  PF03109.11 ABC1 family
    4.2e-06   25.9   0.0    1.4e-05   24.2   0.0    1.8  1  PF07714.12 Protein tyrosine kinase
    0.00029   20.5   0.1     0.0012   18.5   0.0    2.0  2  PF01636.18 Phosphotransferase enzyme family
    0.00039   19.7   0.0    0.00078   18.7   0.0    1.4  1  PF01163.17 RIO1 family
  ------ inclusion threshold ------
      0.034   13.1   0.2       0.26   10.2   0.0    2.1  2  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF03109.11  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.0   5.5e-25   1.5e-21       2     117 ..     205     325 ..     204     327 .. 0.96

  Alignments for each domain:
  == domain 1    score: 76.4 bits;  conditional E-value: 5.5e-25
  PF03109.11   2 elgkpveevFaefdeePlAaASiaQVHrAvlks.....geeVavKvqrpgvkkriksDlkllkllakllkkiskearldleelvdelskelaeeldfkrEAknaekfrenfaklkevkvPk 117
                 +lg+++++   +  eeP++++ iaQVH+A+          +VavKv +pgv + +++D++llk++++ ++ i+  + l+l  lvde++  l e+ld+++EA n +k+r++f++ + v +P+
  MMETSP1325-20131115|1298_1 205 NLGSDWRSKLVSVIEEPIGSGCIAQVHEAEYVVpgtgkRTKVAVKVLHPGVLDLVEADMDLLKWFVSSIELIPRIKYLSLGPLVDEFRALLTEQLDMTTEALNLKKLRDDFEGHEHVFFPE 325
                 68999999999999****************9888888899***********************************99**************************************999997 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   5.1e-09   1.4e-05       3     157 ..     218     422 ..     216     445 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 5.1e-09
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECT......TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBE..SSSSEEEEEE---B--HHHHHHHT.......................................GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET.....TTEEEE-----CEESTTTS CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke......saeeeekeefleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlefLrkk.......................................ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee.....ekvvkisDfGLardiekdd 157
                 +++ +G+G  ++V+e+++    + k++kVavK+l+       +a+ +  + f++ ++++ ++k   +  l+  +    +e+l + te ++  +L++  + +                                       e e+l   +l k+ ++    m +++  ++vH dL   N L+++     + ++ i D G+a ++ +++
  MMETSP1325-20131115|1298_1 218 IEEPIGSGCIAQVHEAEYVVPGTGKRTKVAVKVLHPgvldlvEADMDLLKWFVSSIELIPRIKYLSLGPLVDEFRalLTEQLDMTTEALNLKKLRDDFEGHehvffpepffatrdilieqfidgipirtfmtrdtkethtEAETLYRLKLSKIGMDAVFSMVFMN--NFVHADLHPGNLLVTKapgedRPQIAILDAGMAVELDRSN 422
                 5789******************************8766666566777799999999999998887776666655544578899***************9999*********************************999988888889999999999999999985..8**************98888666**********9993322 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.8   7.6e+03      42      65 ..      38      63 ..      29      74 .. 0.78
   2 !   18.5   0.0   4.2e-07    0.0012     167     195 ..     383     415 ..     356     419 .. 0.87

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 2.8
                HHHHHHCCSSS..B--BEEE..E-CS CS
  PF01636.18 42 allrlLakagi..pvPevlagdtddd 65
                  +r+++  g   +vP+ +a++t+++
  MMETSP1325-20131115|1298_1 38 STARAVRSVGTvcAVPATIAFGTNAY 63
                45677777777788999999998876 PP

  == domain 2    score: 18.5 bits;  conditional E-value: 4.2e-07
                 EEB-SS-SGGGEEEE....TTTTEE..EE---TT- CS
  PF01636.18 167 vllHgDlhpgNllvd....pddgrv..gviDfeda 195
                  ++H DlhpgNllv+    +  +r   +++D ++a
  MMETSP1325-20131115|1298_1 383 NFVHADLHPGNLLVTkapgE--DRPqiAILDAGMA 415
                 58***************644..44445****9998 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   2.8e-07   0.00078      68     162 ..     319     426 ..     294     441 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 2.8e-07
                 ----S--EEEEETTEEEEE----TTCEGGCTTTS-.....-HHHGCHHHHHH.....HHHHHHHCS-EEESS-STTSEEEES....S..SEEE---TTEEETTSTTHHHH CS
  PF01163.17  68 agvrvPkpialkrnvlvmefigedgvaapklkdvel....eeaeelyeeile.....emrklykeaglvHaDLSeyNvlvde....d..kvviIDvsQaveldhpnalef 162
                 ++v  P+p    r++l+ +fi+  g+++ +    ++     eae+ly+  l+     ++  ++  ++ vHaDL   N+lv++    d  ++ i+D + aveld  n  ++
  MMETSP1325-20131115|1298_1 319 EHVFFPEPFFATRDILIEQFID--GIPIRTFMTRDTkethTEAETLYRLKLSkigmdAVFSMVFMNNFVHADLHPGNLLVTKapgeDrpQIAILDAGMAVELDRSNHSKM 426
                 45889*****************..888887766666558888899988766656555777888899**************853332335789999999999987776655 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0     0.089   2.4e+02       3      33 ..     218     252 ..     216     259 .. 0.74
   2 ?   10.2   0.0   9.6e-05      0.26     114     154 ..     379     425 ..     332     451 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.089
                 EEEEEE----EEEEEEEE....TTCCEEEEEEEEE CS
  PF00069.20   3 lleklGsGsfGkVykakk....kktgkkvAvKilk 33 
                 ++e +GsG  ++V +a+      ++++kvAvK+l+
  MMETSP1325-20131115|1298_1 218 IEEPIGSGCIAQVHEAEYvvpgTGKRTKVAVKVLH 252
                 6799*********666551111455569****985 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 9.6e-05
                 HHHTCEE-S--SGGGEEEETT--E.....EE------EEE.CEESS- CS
  PF00069.20 114 lHsngiiHrDLKpeNiLldkkgel.....kiaDFGlakkl.ekssek 154
                 ++ n+++H DL p N+L++k          i D G+a +l  ++++k
  MMETSP1325-20131115|1298_1 379 VFMNNFVHADLHPGNLLVTKAPGEdrpqiAILDAGMAVELdRSNHSK 425
                 44579*************97544445666********9884333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.87u 0.38s 00:00:01.25 Elapsed: 00:00:00.70
# Mc/sec: 1876.01
//
Query:       MMETSP1325-20131115|1305_1  [L=369]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-12   47.9   0.0    8.4e-08   32.0   0.0    2.9  2  PF03567.9 Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF03567.9  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0     1e-05      0.14       5      34 ..      41      78 ..      38     105 .. 0.72
   2 !   32.0   0.0   6.2e-12   8.4e-08      75     249 ..     230     364 ..     181     366 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1e-05
   PF03567.9  5 vapddkivfcrvpKvasttfkrvlvrlig........k 34
                v+  +++vf+r+pK ast++ ++l r +         +
  MMETSP1325-20131115|1305_1 41 VESAQRLVFLRIPKNASTSIIKMLERAHAkqaqgggnE 78
                667789******************99887444444443 PP

  == domain 2    score: 32.0 bits;  conditional E-value: 6.2e-12
   PF03567.9  75 rld.kyfkfifvRdPfeRllSayrnkcvgdkrrgatwcgrlivckgrlpacyegddwsgvsfeeFleclsnla...perernnr.h.wapacd.lctrmladydlvgcyetleedlnailrllallnlknvavfgltefprktqtanttrrsnstrasevevdlseklrqrleelYelDfel 249
                  +d + f f++vR+P++R +S + +          +w                      +sf eF+e l+ +    +e+++  r h +++a + l  +     d + ++e+leed+++++ ll+l      +     e+pr    +n ++  + +   +   + se l   ++e+Y  Df+l
  MMETSP1325-20131115|1305_1 230 VHDdSTFTFAVVRNPYDRVVSSWMYTA-------SWW----------------------CSFPEFVELLASRGlrsTEWTWHQRvHiCEQAAHlLDGEGRVGVDYIARVEHLEEDMAELCTLLGL-----PRC----EIPR----ENGQE--RGDYRGY---YTSERLKSLVREVYATDFQL 364
                 334479******************988.......367......................89******9999996555555554544566788889******************************.....888....9***....78888..3334444...469999999999***99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.39s 00:00:01.08 Elapsed: 00:00:00.68
# Mc/sec: 1300.38
//
Query:       MMETSP1325-20131115|1304_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-19   70.5   4.5    3.4e-11   43.1   0.1    2.3  3  PF12796.2  Ankyrin repeats (3 copies)
    5.9e-13   48.8   2.1    3.6e-07   30.3   0.1    2.8  2  PF13637.1  Ankyrin repeats (many copies)
    4.7e-11   42.4   4.0    2.4e-05   24.2   0.1    3.4  3  PF13857.1  Ankyrin repeats (many copies)
      5e-11   41.7   2.6      0.021   14.5   0.0    4.2  4  PF00023.25 Ankyrin repeat
    1.9e-10   39.8   2.2       0.13   12.4   0.0    4.4  4  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0062        17      59      86 ..      61      88 ..      54      91 .. 0.86
   2 !   36.1   0.6   1.9e-12   5.2e-09       1      83 [.      65     161 ..      65     164 .. 0.83
   3 !   43.1   0.1   1.3e-14   3.4e-11       3      86 ..     101     199 ..      99     202 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0062
   PF12796.2 59 gntpLhlAvrnghlelvklLlekgadvn 86
                ++t L+ A+  ++++++ +Ll +ga   
  MMETSP1325-20131115|1304_1 61 KETLLFEAINEENYDAAWWLLCNGAAAA 88
                68999****************9999765 PP

  == domain 2    score: 36.1 bits;  conditional E-value: 1.9e-12
   PF12796.2   1 LhlAaengnlelvklLlekgadvdl.get....pLhlAaeagnleivklLleagadvnakd........kegntpLhl.AvrnghlelvklLlekga 83 
                 L+ A++ +n++++ +Ll +ga   l  +t    p+ +Aa++gnl+ vk Ll a+a     +        ++gn + +l A+r+g+lel+++L ++ga
  MMETSP1325-20131115|1304_1  65 LFEAINEENYDAAWWLLCNGAAAALqPDThgriPILAAAQRGNLALVKSLLGACAHDKKAHsrmitwkcASGNQAPMLnAARSGNLELCEYLYQHGA 161
                 789*****************8887775556666*******************998554444488889997777665555****************98 PP

  == domain 3    score: 43.1 bits;  conditional E-value: 1.3e-14
   PF12796.2   3 lAaengnlelvklLlekgadvdl.............get.pLhlAaeagnleivklLleagadvnakd..kegntpLhlAvrnghlelvklLlekgadvn 86 
                  Aa++gnl lvk Ll + a                 + + p+  Aa++gnle +++L ++ga  +        nt++++A+  g  +++++Ll +ga + 
  MMETSP1325-20131115|1304_1 101 AAAQRGNLALVKSLLGACAHDKKahsrmitwkcasgN-QaPMLNAARSGNLELCEYLYQHGAARDVSWinSCSNTCMYFAATRGYDDVCRWLLLRGAQPR 199
                 69************98665555335565666666533.36999******************987655566899***********************9986 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   1.7e-06    0.0048       3      53 ..      63     114 ..      62     115 .. 0.93
   2 !   30.3   0.1   1.3e-10   3.6e-07       5      54 .]     141     192 ..     136     192 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.7e-06
   PF13637.1   3 taLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklL 53 
                 t+L+ a++  +++++ +Ll +g+    + d  G+ ++  Aa+rgn+ ++k L
  MMETSP1325-20131115|1304_1  63 TLLFEAINEENYDAAWWLLCNGAAAALQpDTHGRIPILAAAQRGNLALVKSL 114
                 79*********************999998888**************999855 PP

  == domain 2    score: 30.3 bits;  conditional E-value: 1.3e-10
   PF13637.1   5 LhyaaisgrlelvklLlekgid..inrtdesGntaLhiAalrgnieilklLl 54 
                 + +aa+sg+lel+++L+++g+   +  ++++ nt++++Aa rg+ +++++Ll
  MMETSP1325-20131115|1304_1 141 MLNAARSGNLELCEYLYQHGAArdVSWINSCSNTCMYFAATRGYDDVCRWLL 192
                 568****************966569999**********************98 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.2   8.1e-05      0.22       4      43 ..      83     120 ..      80     128 .. 0.84
   2 !   10.5   0.0   0.00018       0.5      18      44 ..     139     165 ..     131     166 .. 0.85
   3 !   24.2   0.1   8.8e-09   2.4e-05       3      49 ..     158     205 ..     158     208 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.1e-05
   PF13857.1   4 hgpadvnatdeggntpLhlAakggalevvrlLlapgadln 43 
                 +g+a++ + d++g+ p+  Aa +g+l +v+ Ll  ga+++
  MMETSP1325-20131115|1304_1  83 NGAAAALQPDTHGRIPILAAAQRGNLALVKSLL--GACAH 120
                 45788889*************************..76665 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00018
   PF13857.1  18 tpLhlAakggalevvrlLlapgadlnl 44 
                  p  +Aa+ g+le++++L+++ga+ ++
  MMETSP1325-20131115|1304_1 139 APMLNAARSGNLELCEYLYQHGAARDV 165
                 57779*****************98765 PP

  == domain 3    score: 24.2 bits;  conditional E-value: 8.8e-09
   PF13857.1   3 ehg.padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdg 49 
                 +hg + dv + + ++nt  ++Aa +g+ +v+r+Ll +ga +++ d+ +
  MMETSP1325-20131115|1304_1 158 QHGaARDVSWINSCSNTCMYFAATRGYDDVCRWLLLRGAQPRMSDFGC 205
                 699999*************************************99976 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.096   2.6e+02       4      26 ..      63      85 ..      61      90 .. 0.90
   2 !   10.7   0.2   0.00012      0.32       1      26 [.      94     119 ..      94     121 .. 0.92
   3 !   11.6   0.0   6.2e-05      0.17       9      26 ..     144     161 ..     138     165 .. 0.89
   4 !   14.5   0.0   7.6e-06     0.021       3      30 ..     173     200 ..     171     203 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.096
                BHHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25  4 TPLHlAalrgnlevvklLlsqGA 26
                T L  A+   n++ + +Ll +GA
  MMETSP1325-20131115|1304_1 63 TLLFEAINEENYDAAWWLLCNGA 85
                8899999999************9 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00012
                 TSCBHHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGA 26 
                 +G+ P   Aa+rgnl  vk Ll+++A
  MMETSP1325-20131115|1304_1  94 HGRIPILAAAQRGNLALVKSLLGACA 119
                 6888999****************988 PP

  == domain 3    score: 11.6 bits;  conditional E-value: 6.2e-05
                 HHHTTHHHHHHHHHHTTS CS
  PF00023.25   9 AalrgnlevvklLlsqGA 26 
                 Aa++gnle +++L ++GA
  MMETSP1325-20131115|1304_1 144 AARSGNLELCEYLYQHGA 161
                 9****************9 PP

  == domain 4    score: 14.5 bits;  conditional E-value: 7.6e-06
                 CBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25   3 fTPLHlAalrgnlevvklLlsqGAdlna 30 
                 +T+   Aa rg+ +v+++Ll +GA + +
  MMETSP1325-20131115|1304_1 173 NTCMYFAATRGYDDVCRWLLLRGAQPRM 200
                 7999********************9866 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0   0.00071       1.9       3      26 ..      62      85 ..      60      89 .. 0.92
   2 !    6.9   0.1    0.0028       7.7       1      22 [.      94     115 ..      94     121 .. 0.87
   3 !   12.4   0.0   4.9e-05      0.13       5      26 ..     140     161 ..     135     166 .. 0.82
   4 !    8.2   0.0    0.0011         3       3      28 ..     173     198 ..     171     200 .. 0.92

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00071
   PF13606.1  3 nTpLhlAasngrielveaLlenga 26
                +T+L+ A+   +++++++Ll nga
  MMETSP1325-20131115|1304_1 62 ETLLFEAINEENYDAAWWLLCNGA 85
                799********************8 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0028
   PF13606.1   1 nGnTpLhlAasngrielveaLl 22 
                 +G+ p+  Aa++g+++lv+ Ll
  MMETSP1325-20131115|1304_1  94 HGRIPILAAAQRGNLALVKSLL 115
                 5889999************998 PP

  == domain 3    score: 12.4 bits;  conditional E-value: 4.9e-05
   PF13606.1   5 pLhlAasngrielveaLlenga 26 
                 p+  Aa++g++el+e+L ++ga
  MMETSP1325-20131115|1304_1 140 PMLNAARSGNLELCEYLYQHGA 161
                 4556****************98 PP

  == domain 4    score: 8.2 bits;  conditional E-value: 0.0011
   PF13606.1   3 nTpLhlAasngrielveaLlengadi 28 
                 nT+++ Aa +g  +++++Ll +ga++
  MMETSP1325-20131115|1304_1 173 NTCMYFAATRGYDDVCRWLLLRGAQP 198
                 899********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.82
# Mc/sec: 841.65
//
Query:       MMETSP1325-20131115|1306_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.5  12.6        0.2   11.5   6.8    2.0  2  PF06818.10 Fez1
      0.012   14.1   0.6      0.015   13.8   0.4    1.1  1  PF08317.6  Spc7 kinetochore protein
      0.024   12.9   1.9      0.027   12.8   1.3    1.0  1  PF01237.13 Oxysterol-binding protein
      0.045   13.4   7.0       0.12   12.1   2.8    2.4  2  PF06428.6  GDP/GTP exchange factor Sec2p
      0.074   13.0   2.2       0.19   11.7   1.1    2.0  2  PF11621.3  C3 binding domain 4 of IgG-bind protein SBI
       0.11   12.2   0.3        0.3   10.8   0.2    1.7  1  PF13975.1  gag-polyprotein putative aspartyl protease
       0.29   10.9   6.6       0.71    9.6   4.4    1.6  1  PF11559.3  Afadin- and alpha -actinin-Binding
        0.3   10.5   5.5       0.45    9.9   3.8    1.3  1  PF04156.9  IncA protein
       0.35    9.6   7.1       0.46    9.2   4.9    1.2  1  PF14362.1  Domain of unknown function (DUF4407)
        1.1    9.1   6.2        2.2    8.1   0.1    2.8  3  PF07989.6  Microtubule associated
        1.2    7.8   4.1        1.4    7.7   2.8    1.2  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        2.2    7.7   7.0          3    7.3   4.8    1.4  1  PF03962.10 Mnd1 family
        2.5    6.1   7.3        3.2    5.8   5.1    1.0  1  PF01499.11 Herpesvirus UL25 family
        4.3    6.9   6.2       0.75    9.3   0.2    2.4  3  PF09105.5  Elongation factor SelB, winged helix


Domain annotation for each model (and alignments):
>> PF06818.10  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.013        12      14      50 ..      24      60 ..      18      66 .. 0.80
   2 ?   11.5   6.8    0.0002       0.2      25     106 ..      64     145 ..      57     155 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.013
  PF06818.10 14 LLkqqLkesqaelaqkaseilsLraqlrearaelqes 50
                 L+qq+ke    l    +e+l +r+ +    a ++++
  MMETSP1325-20131115|1306_1 24 SLRQQIKEKDDALRYVEGELLGMRSLFDGKEAAIRAQ 60
                5899999999999999999999999888777777765 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.0002
  PF06818.10  25 elaqkaseilsLraqlrearaelqeseeklqelkdalrtktleLevceneLqrkkseaellrekagrleaelaelrealasa 106
                 e  ++ase+ + +++l   r+e +  +++l+e  +++ tkt++Le+++  +     +a   + +a   e+e+a+l++al++ 
  MMETSP1325-20131115|1306_1  64 EAGRHASEMTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAKASVALAERKAVESQTRALVAEREAARLQKALDAV 145
                 445789*****************************************9999888888888889999999999***9999876 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.4   1.5e-05     0.015     180     294 ..      27     151 ..      18     157 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.5e-05
   PF08317.6 180 pklrekkealkeelasLrqlkde.....leecdseeleklr..eeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekileecrg...fsakeisklkekvsllekltGw 294
                 ++++ek +al+    +L  +++      +++  + e+e+ r  +e+++ ++++e+ r +   l+++l+e ++++++++ +++  ++++a ae++  e+++     + e ++l++ ++++++  ++
  MMETSP1325-20131115|1306_1  27 QQIKEKDDALRYVEGELLGMRSLfdgkeAAIRAQMEVEAGRhaSEMTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAKASVALAERKAVESQTralVAEREAARLQKALDAVNSALNL 151
                 5555555555544444433333344444555666666666533699999**************************************99998877666542225667777777777777766665 PP

>> PF01237.13  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.3   2.8e-05     0.027     246     323 ..      56     136 ..      24     141 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.8e-05
                 EE-TTTS-S------.......-G.......G....GS-TTBHHHTTT--------HHHHHHHHHHHHHHHHHHHHHHHH- CS
  PF01237.13 246 lwkankkpknsekvygftefaleLNeleeele...aelaptdSrlrpdqraleegdideaeeeKqrlEekQRerrkkreek 323
                 + +a+ + +  ++  ++t+  +eL +l++e +   + l++td  +   + +le+ + + a +e + +E + R+  ++re++
  MMETSP1325-20131115|1306_1  56 AIRAQMEVEAGRHASEMTQAKVELEALRTENDglqSRLHETDATVATKTAQLEAAKASVALAERKAVESQTRALVAEREAA 136
                 55677777777888889999****999988878889**************************************9999875 PP

>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.17   1.7e+02      55      85 ..      24      54 ..      21      72 .. 0.78
   2 ?   12.1   2.8   0.00012      0.12      40      82 ..      73     115 ..      67     134 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.17
                HHHHHHHHHHHHHHHHHHHHHHHHHCTTT-- CS
   PF06428.6 55 kleeqLkekelllevlqaqlkeLKellesle 85
                +l++q+kek+  l+  + +l  +++l+   e
  MMETSP1325-20131115|1306_1 24 SLRQQIKEKDDALRYVEGELLGMRSLFDGKE 54
                6899******999999999999999986643 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00012
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   PF06428.6  40 anArkekeaveeknekleeqLkekelllevlqaqlkeLKelle 82 
                  +A+ e ea+ + n+ l++ L+e+++ +++ +aql++ K+ + 
  MMETSP1325-20131115|1306_1  73 TQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAKASVA 115
                 46888*******************************9998663 PP

>> PF11621.3  C3 binding domain 4 of IgG-bind protein SBI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.1   0.00019      0.19      14      65 ..      82     136 ..      73     141 .. 0.85
   2 ?   -0.5   0.0       1.3   1.3e+03      50      58 ..     137     145 ..     135     149 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00019
   PF11621.3  14 vksandai.sklnekdsienrrlaqrevnkaPmdv..kkhlqkqldalvaqkdae 65 
                 +++ nd + s+l e d+    + aq e  ka + +  +k +  q  alva ++a 
  MMETSP1325-20131115|1306_1  82 LRTENDGLqSRLHETDATVATKTAQLEAAKASVALaeRKAVESQTRALVAEREAA 136
                 6677887659*********************98763267899*********9986 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 1.3
   PF11621.3  50 hlqkqldal 58 
                  lqk lda+
  MMETSP1325-20131115|1306_1 137 RLQKALDAV 145
                 699*9*996 PP

>> PF13975.1  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00031       0.3      29      63 ..     126     160 ..     124     164 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00031
   PF13975.1  29 tgsfiseslaarLglaleaiqsrksvrlAdGsvre 63 
                 t+ +++e++aarL+ al a++s+  ++ A+G++++
  MMETSP1325-20131115|1306_1 126 TRALVAEREAARLQKALDAVNSALNLSAAGGGGGA 160
                 6789*****************99999999998876 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   4.4   0.00073      0.71      63     133 ..      60     130 ..      55     144 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00073
   PF11559.3  63 kleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkniiqsiktqyah 133
                 ++e e  r  s++ + k +le+l++e+++lq++  +  + ++t +++l + k +++  ++++ + +t + +
  MMETSP1325-20131115|1306_1  60 QMEVEAGRHASEMTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAKASVALAERKAVESQTRALV 130
                 6777888999999999**************************************99999998888777665 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.8   0.00046      0.45      55     145 ..      44     141 ..      21     152 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00046
   PF04156.9  55 lgllllllkapvqseedekiee.......srlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelake 145
                 lg+ +l+  ++   + ++++e+       ++++ el +++++ + l++ l + +  +a+++++le+ +    l++    + ++r + +e++ ++l+k 
  MMETSP1325-20131115|1306_1  44 LGMRSLFDGKEAAIRAQMEVEAgrhasemTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAKASVALAERKAVESQTRALVAEREAARLQKA 141
                 57778888888888888888889999999999999999999999999999999999999999999999999999966667777777777777777765 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.9   0.00047      0.46     132     236 ..      24     137 ..      13     163 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00047
   PF14362.1 132 slsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGt...ggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaelean......krkaaleeeraakvaeeqaan 236
                 sl+++++++++++   + el   ++ ++ +e++ ++++e +     ++   +  + ++ +++ d +q +l +++a+++++ a+lea+      ++++a e+++ a vae++aa+
  MMETSP1325-20131115|1306_1  24 SLRQQIKEKDDALRYVEGELLGMRSLFDGKEAAIRAQMEVEagrHASEMTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAkasvalAERKAVESQTRALVAEREAAR 137
                 567888888888888888888888888888888888877543323333333334455555555555566666666666666666655666666555555555555555555544 PP

>> PF07989.6  Microtubule associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0         1     1e+03      54      70 ..      24      40 ..      21      43 .. 0.79
   2 ?    8.1   0.1    0.0022       2.2      36      73 ..      63     100 ..      54     102 .. 0.79
   3 ?    2.9   0.4     0.088        86      36      73 ..     112     149 ..     103     151 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 1
   PF07989.6 54 tlkrelkekkklLkkae 70
                +l++++kek++ L+  e
  MMETSP1325-20131115|1306_1 24 SLRQQIKEKDDALRYVE 40
                79999999999998665 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0022
   PF07989.6  36 esveellkenielkvevetlkrelkekkklLkkaekal 73 
                  +  +  +e ++ kve+e l+ e++ ++++L++++ ++
  MMETSP1325-20131115|1306_1  63 VEAGRHASEMTQAKVELEALRTENDGLQSRLHETDATV 100
                 45555668899********************9988765 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.088
   PF07989.6  36 esveellkenielkvevetlkrelkekkklLkkaekal 73 
                  sv  + ++ +e ++  ++ +re ++++k L+  ++al
  MMETSP1325-20131115|1306_1 112 ASVALAERKAVESQTRALVAEREAARLQKALDAVNSAL 149
                 5555666788999999**************99888776 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   2.8    0.0014       1.4      84     144 ..      70     131 ..      24     151 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0014
   PF10186.4  84 eeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklns.lesltae 144
                 +e+ q++ ++e+l+ +++ ++s+l  ++  ++++++ql+  ++++  +++k  + +++ +++
  MMETSP1325-20131115|1306_1  70 SEMTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAKASVALAERKAVEsQTRALVA 131
                 33444444444444444444444443333333333333333333333333322222222222 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   4.8    0.0031         3      63     128 ..      71     135 ..      26     150 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0031
  PF03962.10  63 akkklkteleklkkeleelkqrikelqaeiekekkkreet......eereelleelkeleeelkklkkelek 128
                 ++ + k ele+l+ e + l++r+ e++a +++++++ e +      +e        k++e+++++l +e e+
  MMETSP1325-20131115|1306_1  71 EMTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAAkasvalAE-------RKAVESQTRALVAEREA 135
                 456788899999999999999999999999999888888844444444.......44555554444444442 PP

>> PF01499.11  Herpesvirus UL25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   5.1    0.0032       3.2      31     115 ..      59     154 ..      51     164 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0032
  PF01499.11  31 erfalrlrkeaeevkleklkkralkaeLdnleaksqtrseeiearLreiea...........eleevadaldlletaaaaaeeadaaesdataaea 115
                  ++++++ ++a e++++k++ +al++e d l+ +  +  + + ++  ++ea           ++e +++al +  +aa+ ++  da++s+ +++ a
  MMETSP1325-20131115|1306_1  59 AQMEVEAGRHASEMTQAKVELEALRTENDGLQSRLHETDATVATKTAQLEAakasvalaerkAVESQTRALVAEREAARLQKALDAVNSALNLSAA 154
                 4566677777788999999999***********999999999999999999888998888888999999998888999999999999986665554 PP

>> PF09105.5  Elongation factor SelB, winged helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2   0.00077      0.75      18      55 ..      50      87 ..      44      90 .. 0.89
   2 ?   -0.7   0.6         1     1e+03      23      39 ..     108     123 ..     104     136 .. 0.73
   3 ?   -1.8   0.2       2.4   2.3e+03      22      41 ..     123     142 ..     117     149 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00077
                -BHHHHHHHHT--HHHHHHHHHHHHH---EEEEEETTE CS
   PF09105.5 18 ldWqeaatraslsleetrkllqsmaaaGqvtllrvend 55
                +d +eaa ra + +e  r       a   +  lr end
  MMETSP1325-20131115|1306_1 50 FDGKEAAIRAQMEVEAGRHASEMTQAKVELEALRTEND 87
                6899***************9988888899999*****9 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1
                 HHHHHT--HHHHHHHHH CS
   PF09105.5  23 aatraslsleetrkllq 39 
                  a++as++l e rk + 
  MMETSP1325-20131115|1306_1 108 EAAKASVALAE-RKAVE 123
                 57789999988.55544 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 2.4
                 HHHHHHT--HHHHHHHHHHH CS
   PF09105.5  22 eaatraslsleetrkllqsm 41 
                 e+ tra ++  e+ +l +++
  MMETSP1325-20131115|1306_1 123 ESQTRALVAEREAARLQKAL 142
                 56677777766666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1140  (0.0833821); expected 273.4 (0.02)
Passed bias filter:                      646  (0.0472499); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.60u 0.42s 00:00:01.02 Elapsed: 00:00:00.72
# Mc/sec: 555.82
//
Query:       MMETSP1325-20131115|1308_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-11   44.5   0.0    1.5e-11   44.5   0.0    1.0  1  PF13426.1  PAS domain
    7.1e-05   22.4   0.0    7.6e-05   22.3   0.0    1.1  1  PF00989.19 PAS fold
  ------ inclusion threshold ------
      0.011   15.3   0.2      0.012   15.1   0.1    1.1  1  PF00967.12 Barwin family
      0.017   15.0   0.0      0.019   14.9   0.0    1.1  1  PF08448.5  PAS fold
       0.59    8.8   3.4       0.71    8.5   0.5    1.9  2  PF00913.14 Trypanosome variant surface glycoprotein (A-type)


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   5.4e-15   1.5e-11      16      91 ..       1      76 [.       1      87 [] 0.91

  Alignments for each domain:
  == domain 1    score: 44.5 bits;  conditional E-value: 5.4e-15
   PF13426.1 16 aNeaalrllGytreevlgksirdlfpededeeavalleraleaggevevelelrrkdgeefpvevtvtpvrdedge 91
                +Nea+ +l+G+t ee  g+++r l++ed+d+++va+l + +++g+  ++e++++ k g++f + + v+p+ +++g 
  MMETSP1325-20131115|1308_1  1 VNEAWTELCGFTQEEAEGQTLRCLQGEDTDANTVAQLVEDCADGKASSMEVTNYDKAGKKFRNFLQVYPLSSNEGG 76
                7*********************************************************************877643 PP

>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   2.8e-08   7.6e-05      26      84 ..       1      59 [.       1      86 [. 0.84

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 2.8e-08
                ETHHHHHHH-S-HHHHS---CCHHCSCCHCCTCCHHHHHHHHHH--ECEEEEECCS.SS CS
  PF00989.19 26 vNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfklrdg 84
                vN+a++el+G+++ee+ g++l  l  e++da ++++l + +++g+ s+++ ++ ++  +
  MMETSP1325-20131115|1308_1  1 VNEAWTELCGFTQEEAEGQTLRCLQGEDTDANTVAQLVEDCADGKASSMEVTNYDKAGK 59
                7*******************************************999998888777333 PP

>> PF00967.12  Barwin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   4.5e-06     0.012      44      87 ..       4      45 ..       1      64 [. 0.82

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 4.5e-06
  PF00967.12 44 gwtafcgpagnrgqsscGkclrvtntatgasvivrivdqcsngG 87
                +wt  cg ++++ + +  +cl+ ++  t+a++++++v+ c++g 
  MMETSP1325-20131115|1308_1  4 AWTELCGFTQEEAEGQTLRCLQGED--TDANTVAQLVEDCADGK 45
                7*******************98765..678899*********94 PP

>> PF08448.5  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   6.8e-06     0.019      20      94 ..       1      76 [.       1      84 [. 0.78

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 6.8e-06
   PF08448.5 20 aNaaaaelfgappeellGktlaellpee.daarleralrrvlegeepiefleelllpgeerhyelrllPlrdesGe 94
                +N+a+ el g+++ee+ G+tl+ l  e+ da  +++ ++ +++g+++  +++ ++  g+     l+++Pl   +G+
  MMETSP1325-20131115|1308_1  1 VNEAWTELCGFTQEEAEGQTLRCLQGEDtDANTVAQLVEDCADGKASSMEVTNYDKAGKKFRNFLQVYPLSSNEGG 76
                7*********************7666669***************96665555555555555555555999888887 PP

>> PF00913.14  Trypanosome variant surface glycoprotein (A-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.028        77      25      36 ..       3      14 ..       2      17 .. 0.90
   2 ?    8.5   0.5   0.00026      0.71     131     174 ..      17      58 ..      11      63 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.028
  PF00913.14 25 aawkplCelske 36
                +aw++lC++++e
  MMETSP1325-20131115|1308_1  3 EAWTELCGFTQE 14
                79********98 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00026
  PF00913.14 131 kgggnggCLansdggaataatetaidgcecklttsevtttsatt 174
                  g + + CL++ d++a+t a  + +d+++ k++  evt+   + 
  MMETSP1325-20131115|1308_1  17 EGQTLR-CLQGEDTDANTVAQ-LVEDCADGKASSMEVTNYDKAG 58 
                 344444.**************.*************999986554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.82
# Mc/sec: 254.25
//
Query:       MMETSP1325-20131115|1311_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.2    8.4   7.4        3.2    7.9   5.1    1.3  1  PF07941.6 Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   5.1   0.00023       3.2      27      45 ..      28      46 ..      17      49 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00023
                HHHHHHHTTSSTTXXXHHH CS
   PF07941.6 27 arererlahsraaaaaava 45
                ar  er++  raaaaaa+a
  MMETSP1325-20131115|1311_1 28 ARTHERKTTRRAAAAAAAA 46
                899***********99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 269.13
//
Query:       MMETSP1325-20131115|1310_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.8    8.1   5.4        1.9    9.1   0.5    2.3  2  PF09598.5 Stm1


Domain annotation for each model (and alignments):
>> PF09598.5  Stm1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.2     0.061   8.4e+02      24      41 ..      31      55 ..      18      64 .. 0.54
   2 ?    9.1   0.5   0.00014       1.9       9      47 ..      87     121 ..      82     131 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.061
   PF09598.5 24 elvkksttskkrd......kp.kaP 41
                ++v++  ++ ++d      k+  +P
  MMETSP1325-20131115|1310_1 31 QIVAPVERAEAKDssglakKTaSMP 55
                4455555555544333333333466 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00014
   PF09598.5   9 DdeeDpsrvpspptkelvkksttskkrdkpkaPnkpaPr 47 
                 D++eD + +p++p  ++ ++s+t+ +r +p   + + P+
  MMETSP1325-20131115|1310_1  87 DTAEDMKPTPQTP-LAQMRTSPTHVARRVP---RAAVPV 121
                 8999*****9999.55899*********66...555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.66
# Mc/sec: 668.08
//
Query:       MMETSP1325-20131115|1309_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-07   30.5   0.0    2.1e-07   30.4   0.0    1.1  1  PF00631.17 GGL domain
  ------ inclusion threshold ------
      0.032   14.0   0.0      0.036   13.8   0.0    1.0  1  PF04350.8  Pilus assembly protein, PilO


Domain annotation for each model (and alignments):
>> PF00631.17  GGL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   3.1e-11   2.1e-07       9      73 .]       6      71 .]       1      71 [] 0.88

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 3.1e-11
  PF00631.17  9 klklkreieqLkkeLer.eri.kvSkackelidYcestkDpllpevwgppsageNpwiek...ggccwil 73
                 +k ++ei+ +kk++e+ +   ++S+ack++ + +++  Dp+ +      +  eNp+++    gg+c+++
  MMETSP1325-20131115|1309_1  6 LEKTENEIAEMKKDIETfNKAlPMSEACKQICTEINASPDPFSSAG----QVPENPFAKTgggGGGCTVM 71
                568899************6666********************9999....3448*******99999*998 PP

>> PF04350.8  Pilus assembly protein, PilO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   5.3e-06     0.036      22      61 ..       3      42 ..       1      45 [. 0.93

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.3e-06
   PF04350.8 22 aanLealkkqleeleeefeellkqLPskkeipsLLedinq 61
                a +Le+  ++++e+++++e+  k LP ++  +++ ++in 
  MMETSP1325-20131115|1309_1  3 APALEKTENEIAEMKKDIETFNKALPMSEACKQICTEINA 42
                678********************************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       612  (0.044763); expected 273.4 (0.02)
Passed bias filter:                      576  (0.0421299); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.77
# Mc/sec: 220.96
//
Query:       MMETSP1325-20131115|1307_1  [L=1044]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-06   26.2   1.0    8.9e-06   25.3   0.7    1.4  1  PF00397.21 WW domain
     0.0026   16.0   0.8        1.5    6.8   0.1    2.8  2  PF05536.6  Neurochondrin


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.7   1.3e-09   8.9e-06       4      31 .]     230     256 ..     228     256 .. 0.84

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 1.3e-09
                 SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   4 gWeersddddGrvYYyNheTgetqWekP 31 
                 +W+e++ +d G+vYY N++Tg  qW+ P
  MMETSP1325-20131115|1307_1 230 EWVEVVGPD-GKVYYTNPKTGAVQWNEP 256
                 4*9767467.***************977 PP

>> PF05536.6  Neurochondrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.1   0.00023       1.5      81     168 ..     312     403 ..     296     435 .. 0.85
   2 !    6.6   0.0   0.00027       1.9      88     150 ..     642     704 ..     623     722 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00023
   PF05536.6  81 LacFcseeelardeevveriPtlvev.llkssdlsmvedayelLsaiaatpkGakaliakgavsaLiqiyss...qsfvleqalelllllls 168
                 L+c+++++++a++     +   lv+  ll+ +d  +++++  +L a++  ++ ++al + + + +L + + +   ++  + +a+++l +l  
  MMETSP1325-20131115|1307_1 312 LKCMAHDPANAKQLAQQPKLANLVQAmLLNPDDEGILDNCATTLEAMSKYDQFQEALNTLEYIIVLNNTIQAhmpNEPLVTKAMNILANLAF 403
                 89***********9999999999986156888899**************************999997776666668889999****999865 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.00027
   PF05536.6  88 eelardeevveriPtlvevllkssdlsmvedayelLsaiaatpkGakaliakgavsaLiqiys 150
                 + + r + v+   P++ ++ +k +d +++eda ++   ia +p+   +++a+  v++L +i  
  MMETSP1325-20131115|1307_1 642 PCIERFPVVTGCAPIFHACETKMDDEHLIEDAVQVTFNIAVHPDNRTQIVANRGVEVLLKILQ 704
                 5566666777888*********************************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1044 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.48u 0.39s 00:00:01.87 Elapsed: 00:00:01.20
# Mc/sec: 2084.83
//
Query:       MMETSP1325-20131115|1316_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.65
# Mc/sec: 1065.46
//
Query:       MMETSP1325-20131115|1314_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-33  115.8   0.0    6.4e-33  113.6   0.0    1.8  1  PF01167.13 Tub family
  ------ inclusion threshold ------
       0.16   11.6   0.0       0.28   10.9   0.0    1.3  1  PF10665.4  Minor capsid protein


Domain annotation for each model (and alignments):
>> PF01167.13  Tub family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.6   0.0   9.3e-37   6.4e-33       3     246 .]     164     402 ..     162     402 .. 0.78

  Alignments for each domain:
  == domain 1    score: 113.6 bits;  conditional E-value: 9.3e-37
  PF01167.13   3 prdalvqCfikrdkskldkglyltlslaleeekg....kfLLaarkr.krskttnylisldak....dlsrsseayigklrsnllgtkfivyDtgqnekkaklvspkvasgrqelaavsyelnvLGtrGPrrmtvilpsieasaeeeggrvpv.qplneeqeslleeeqkkkke.sllvLknkaPrWneelqsyvLnfrGrvtvasvknfqlvaasepdkivlqfGkvakdvftmDyryPlsalqafaiclssfd 246
                 p+d +vqC i rd+s+l++ + + + l+l+  ++    k +L ark+ ++  ++  +  +        l +++ +y+gkl+      + i+y++++++++  +v    +++  ++          G   Pr+++v+lp i++++      +p+ +  ++  e+ll + q+++ e +   L+ k P++++  + y Lnf+Grvtv svknfqlv+ ++   ++ qfGkv +d f +D++ Pl ++qaf+++l+ f+
  MMETSP1325-20131115|1314_1 164 PNDPMVQCLIVRDRSGLKR-MNPEYNLYLQGGRKkgqeKLILIARKQaHKNGCSYHIYNVSRGhlggRLRKKGGNYVGKLKCSGTKIENIMYNNEEKKDEIGAVLFAKPTIMDHMRD--------G-AQPRKLKVVLPPIDQNSI----PIPQpKKFDNPYEGLLGQLQSDQLEpGCRQLERKEPVFEN--GNYRLNFHGRVTVPSVKNFQLVDPQDVSDVICQFGKVDDDRFHLDFKGPLNPFQAFCVTLAQFN 402
                 7899************965.999999999863332355666666655155555555555554411225789**********99888888****999999876665555555554443........4.46************9998....333313334456778888877776625789*******975..78**********************************************************9996 PP

>> PF10665.4  Minor capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.1e-05      0.28      12      42 ..     248     278 ..     244     288 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4.1e-05
   PF10665.4  12 lihtvtyteyvgedeigqlsyakpvvIenvr 42 
                  i++++y++  ++deig+++ akp++++++r
  MMETSP1325-20131115|1314_1 248 KIENIMYNNEEKKDEIGAVLFAKPTIMDHMR 278
                 699**************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.33s 00:00:01.04 Elapsed: 00:00:00.70
# Mc/sec: 1379.62
//
Query:       MMETSP1325-20131115|1313_1  [L=625]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-42  145.7   0.0    1.8e-42  145.2   0.0    1.2  1  PF00069.20 Protein kinase domain
      3e-18   65.7   0.0    4.2e-18   65.2   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.027   13.8   0.1      0.043   13.2   0.1    1.2  1  PF08598.6  Sds3-like
      0.027   13.4   0.1       0.29   10.0   0.0    2.2  2  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
      0.029   14.3   0.1      0.073   13.0   0.1    1.7  1  PF14389.1  Leucine-zipper of ternary complex factor MIP1
      0.054   11.1   0.1      0.077   10.5   0.1    1.1  1  PF01576.14 Myosin tail
      0.088   12.5   2.4        0.2   11.3   1.7    1.6  1  PF06698.6  Protein of unknown function (DUF1192)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.2   0.0   9.1e-46   1.8e-42      12     254 ..     127     385 ..     124     388 .. 0.94

  Alignments for each domain:
  == domain 1    score: 145.2 bits;  conditional E-value: 9.1e-46
                 -EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH.HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E......EE------EEE..CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST.......HHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHH CS
  PF00069.20  12 fGkVykakkkktgkkvAvKilkkeeekskkektavr.ElkilkklsHpnivkllevfeekdelylvleyveggdlfdllk.kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel......kiaDFGlakkl..eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge.......seedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeei 254
                 +++V++  ++k+++ +A+++++k++ +  ++ ++++ E++ilk+l+Hp++++ll+v++e+d +++ ++++++ d+++l + +++ + + ++ +++ + +++l+y+H +g+ H D+KpeNiL++ +g+        ++DF ++ +     +++ +t  vg++ + APE+l ++++  +++D+WslGv+l ell g+ pf++        + e q + ++++lk  le   +++  + +++   i++ll+ ++++R+ta+++
  MMETSP1325-20131115|1313_1 127 SSEVISTFRQKDRRAIAIRKIRKNSMRTLASARRLNsEIRILKQLDHPHVIHLLDVWHESDFVCMAFKLYPQ-DVYSLSSgHSQGMPTVHVAQLLNSCASALHYIHGRGVFHLDIKPENILVSGDGSEenpyssILTDFNISMCTeqLDENGLTTGHVGSEGFYAPEMLSSQPYSCAPADMWSLGVVLLELLMGHEPFNTVwigcygdRVEGQVASFKRNLKAALETLLSEHPARTTSVVGAINSLLHLEASQRVTAKDL 385
                 68999********************999998777669*********************************99.6665555789999*************************************99988999**9********99888888999**********************************************999999998889999999999**99999999999999*********************986 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   0.0   2.2e-21   4.2e-18      24     208 ..     135     325 ..     122     385 .. 0.86

  Alignments for each domain:
  == domain 1    score: 65.2 bits;  conditional E-value: 2.2e-21
                 TTSSEEEEEEEEECTTSBHHH..HHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET......TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHH.HHHHH---HHHHHHTTT-GTTTT CS
  PF07714.12  24 kekkevkVavKtlkesaeeee..keefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee......ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsk.sDvWsfGvllwEiftlgespypg 208
                 ++k++  +a+ +++++++++    +++ +e++i+k+l+hp++++ll v  +++ +++ +++ ++ d++++   + ++ + + ++ ++    a++++y++ + + H d+   N+L++            ++Df ++  +e+ d+   ++++  +  ++apE+l+++ ++ + +D+Ws Gv+l E++  g++p+++
  MMETSP1325-20131115|1313_1 135 RQKDRRAIAIRKIRKNSMRTLasARRLNSEIRILKQLDHPHVIHLLDVWHESDFVCMAFKLYPQ-DVYSLSSGH-SQGMPTVHVAQLLNSCASALHYIHGRGVFHLDIKPENILVSGdgseenPYSSILTDFNISMCTEQLDENGLTTGHVGSEGFYAPEMLSSQPYSCApADMWSLGVVLLELLM-GHEPFNT 325
                 4678889999999776655432388999**********************99999999998887.566655555.999*************************************97666653447789*********9999999999999***************997549************98.8899765 PP

>> PF08598.6  Sds3-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   2.2e-05     0.043      93     138 ..      34     124 ..      32     178 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.2e-05
   PF08598.6  93 kllkerlinkleekikrLeeeresldiaessalllhprkfslanp.............................................a 138
                 +l++e++++++ + +++L  er + + ae+ + +lh+r +  +n                                              +
  MMETSP1325-20131115|1313_1  34 SLCSEDVQEEIASLRAQLAMERSTREAAEKAYRDLHKRYRTVKNElvgvlfdvlpgdadprfeslpkrldeaaiarkyseyspgcgvkfyQ 124
                 79***************************************99988888888888887777777777777777777766666666666662 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.13   2.4e+02      34      71 ..     137     174 ..     123     184 .. 0.83
   2 ?   10.0   0.0   0.00015      0.29     113     156 ..     208     254 ..     197     273 .. 0.74

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.13
   PF06293.9  34 kyyrggllgklvrdlyrfklgetrsvrEfrllkrLrea 71 
                 k +r   + k+ ++++r  ++  r   E+r lk+L   
  MMETSP1325-20131115|1313_1 137 KDRRAIAIRKIRKNSMRTLASARRLNSEIRILKQLDHP 174
                 457888999*****99999***************9765 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00015
   PF06293.9 113 ae.laeelkralleavGrliakmhragvnHtdlnahnilldeee..e 156
                  + ++     +ll+  +++ + +h +gv H d+ + nil+  ++  e
  MMETSP1325-20131115|1313_1 208 SQgMPTVHVAQLLNSCASALHYIHGRGVFHLDIKPENILVSGDGseE 254
                 4444445557889999************************9987531 PP

>> PF14389.1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   3.7e-05     0.073       9      43 ..      36      70 ..      28      80 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.7e-05
   PF14389.1  9 krsaLeqeVkkLqkqLqdeekvreaLekalgrsss 43
                + +  ++e+++L+ qL  e+++rea eka +  ++
  MMETSP1325-20131115|1313_1 36 CSEDVQEEIASLRAQLAMERSTREAAEKAYRDLHK 70
                567899***********************987655 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   3.9e-05     0.077      42      83 ..      38      79 ..      30     113 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 3.9e-05
  PF01576.14 42 kelearieeleeeleaeraaRakaekeradlsreleelserL 83
                +++++ i+ l  +l  er  R+ aek+ +dl++ + +++++L
  MMETSP1325-20131115|1313_1 38 EDVQEEIASLRAQLAMERSTREAAEKAYRDLHKRYRTVKNEL 79
                568999*******************************99998 PP

>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.7    0.0001       0.2      33      57 ..      40      64 ..      38      66 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.0001
   PF06698.6 33 LqaEIaRleaalakkkasraAAeal 57
                 q+EIa l+a+la+ +++r+AAe  
  MMETSP1325-20131115|1313_1 40 VQEEIASLRAQLAMERSTREAAEKA 64
                589********************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.09u 0.40s 00:00:01.49 Elapsed: 00:00:00.82
# Mc/sec: 1826.49
//
Query:       MMETSP1325-20131115|1318_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 290.47
//
Query:       MMETSP1325-20131115|1312_1  [L=550]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.83u 0.41s 00:00:01.24 Elapsed: 00:00:00.94
# Mc/sec: 1402.12
//
Query:       MMETSP1325-20131115|1319_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0086   15.8   0.0     0.0096   15.7   0.0    1.0  1  PF03372.18 Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> PF03372.18  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0     7e-07    0.0096       1      39 [.      16      58 ..      16      59 .] 0.72

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 7e-07
                EEEEECE................CGTHCH..HHHHHHTCG-SEEEEECC- CS
  PF03372.18  1 ltwNvlg...wnarsdr......akkldq..ladllqsedpDvllLQEvd 39
                +t+Nvl    +     +      + +  +  + d+l + d+Dv+ L+Ev+
  MMETSP1325-20131115|1319_1 16 ATLNVLKddaG-----NaealrhSVR--HeaICDELMELDADVIGLNEVT 58
                69999994332.....1455543333..235*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.73
# Mc/sec: 193.68
//
Query:       MMETSP1325-20131115|1320_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-09   35.2   0.0    4.6e-09   35.0   0.0    1.0  1  PF01602.15 Adaptin N terminal region


Domain annotation for each model (and alignments):
>> PF01602.15  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   3.4e-13   4.6e-09       2      68 ..      22      94 ..      21      95 .] 0.85

  Alignments for each domain:
  == domain 1    score: 35.0 bits;  conditional E-value: 3.4e-13
  PF01602.15  2 ekriqqelakilnsn.ddekkkeavkkliylialGe.....dvsflffevvklvaskdfelKrlvYlylella 68
                ++++ qe+  + + n  ++k++  ++k + + ++Ge     +v ++ff v+kl++s+d+ l+r+ Yl+++++a
  MMETSP1325-20131115|1320_1 22 KATVLQECRCFHEPNiEPRKCATLITKMLHIVTQGEaltstEVTDVFFGVTKLFQSQDPYLRRMMYLFIKEVA 94
                567778876666666999******************65555555**************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 379.42
//
Query:       MMETSP1325-20131115|1321_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-30  103.6   0.3    4.4e-30  103.1   0.2    1.3  1  PF03366.11 YEATS family


Domain annotation for each model (and alignments):
>> PF03366.11  YEATS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.1   0.2   3.2e-34   4.4e-30       1      82 [.      55     135 ..      55     137 .. 0.97

  Alignments for each domain:
  == domain 1    score: 103.1 bits;  conditional E-value: 3.2e-34
  PF03366.11   1 thkwtvfvrgldsedlskfikkVtFkLhetfanpvrvvkkpPfevtetGWgeFeiqikiqfkeeskekpltlqhdLklhqeg 82 
                 thkwt+fvrg+++ed+++f+ kV+F+Lh++fa+pvr + +pPfevte GWgeFe  i+i+f++  +e+p+++ h ++l + +
  MMETSP1325-20131115|1321_1  55 THKWTLFVRGPNNEDITYFVAKVVFTLHPSFAQPVREILQPPFEVTEFGWGEFEASIRIFFQDP-NERPVDIVHPIRLYPMN 135
                 8************************************************************996.************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.69
# Mc/sec: 743.22
//
Query:       MMETSP1325-20131115|1324_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.2e-39  133.2   3.5    2.9e-39  132.8   2.4    1.1  1  PF06047.6 Ras-induced vulval development antagonist
     0.0019   18.0   0.7     0.0023   17.8   0.5    1.2  1  PF14424.1 The  BURPS668_1122 family of deaminases


Domain annotation for each model (and alignments):
>> PF06047.6  Ras-induced vulval development antagonist
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   2.4   4.3e-43   2.9e-39      14     103 ..       1      90 [.       1      92 [. 0.98

  Alignments for each domain:
  == domain 1    score: 132.8 bits;  conditional E-value: 4.3e-43
   PF06047.6  14 eGeaiaayvqkGkriPrrGeiGltseeieefekvGyvmsGsrhkrmeavrlrkenqvysaeekralallnkeerakkeekilsqlkelik 103
                 eG+aia+yvqk  riPrrGe+G ++ eie+ ek+GyvmsGsrh rm+a+r+rkenqvysaeekralal++ ee ++ e+ki+++++++++
  MMETSP1325-20131115|1324_1   1 EGAAIAQYVQKNMRIPRRGEVGWNGTEIESLEKQGYVMSGSRHARMNAIRIRKENQVYSAEEKRALALIQFEENQQAEAKIMNEFRDMLT 90 
                 8***************************************************************************************86 PP

>> PF14424.1  The  BURPS668_1122 family of deaminases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.5   3.3e-07    0.0023      15      90 ..      16      91 ..       4     113 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 3.3e-07
   PF14424.1 15 rrsgnlavarfeieglnaerealSgsgetkslgfverpderlvkskreiesvgrkfkRvnDsEqKiLrkleeqits 90
                 r g++     eie+l+++++ +Sgs  + ++ +  r ++++++++ + + +  +f+ ++ +E+Ki+++ ++ +t+
  MMETSP1325-20131115|1324_1 16 PRRGEVGWNGTEIESLEKQGYVMSGSRHARMNAIRIRKENQVYSAEEKRALALIQFEENQQAEAKIMNEFRDMLTD 91
                4666777777899**************99999899999*******88888888999***********998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       973  (0.0711673); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.69
# Mc/sec: 406.34
//
Query:       MMETSP1325-20131115|1323_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.63
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|1322_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-10   38.5   1.2    6.6e-10   38.4   0.8    1.0  1  PF04142.10 Nucleotide-sugar transporter
  ------ inclusion threshold ------
       0.41   10.5   4.2       0.42   10.5   2.9    1.1  1  PF00892.15 EamA-like transporter family


Domain annotation for each model (and alignments):
>> PF04142.10  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.8   9.6e-14   6.6e-10     180     224 ..       3      47 ..       1      57 [. 0.91

  Alignments for each domain:
  == domain 1    score: 38.4 bits;  conditional E-value: 9.6e-14
  PF04142.10 180 lvvllqavgGlvvavvvkyaDNilkafatslaivlstvasvllfd 224
                 l v+ +a+gGl+va v+kyaD +lk++at+++++l+ v+s + f 
  MMETSP1325-20131115|1322_1   3 LSVFNSAIGGLTVAGVLKYADAVLKGYATAVSVMLTGVLSAIFFS 47 
                 67999***********************************99886 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.9   6.1e-05      0.42      58     103 ..       2      47 ..       1      58 [. 0.94

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 6.1e-05
  PF00892.15  58 llgllgtvlgyllffyalkktsasnaslitslePvftillsvlllg 103
                 +l+++++++g l  +  lk+ +a+  +  t++++++t +ls++++ 
  MMETSP1325-20131115|1322_1   2 FLSVFNSAIGGLTVAGVLKYADAVLKGYATAVSVMLTGVLSAIFFS 47 
                 899**************************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       506  (0.0370099); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.69
# Mc/sec: 215.32
//
Query:       MMETSP1325-20131115|1325_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 554.95
//
Query:       MMETSP1325-20131115|1327_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   13.4   0.0       0.03   13.0   0.0    1.2  1  PF04321.12 RmlD substrate binding domain


Domain annotation for each model (and alignments):
>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.2e-06      0.03     175     216 ..       3      47 ..       1      64 [. 0.86

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.2e-06
                 EESS-B---EEHHHHHHHHHHHHHHT-........---EE---B- CS
  PF04321.12 175 vvaDqlgsPTsaedlAdvllallekaaeeeal...agvyHlansg 216
                  v+D+  +PT a   A+v+++ll ++  +++    ++ +H++++ 
  MMETSP1325-20131115|1327_1   3 TVDDKSRRPTPATFAAEVVIELLGEQSMSHSDgeaWRWLHCVGHL 47 
                 59*********************9988776666779999*99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 588.58
//
Query:       MMETSP1325-20131115|1326_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.32s 00:00:00.85 Elapsed: 00:00:00.57
# Mc/sec: 1049.44
//
Query:       MMETSP1325-20131115|1328_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-11   43.0   1.2    1.4e-05   23.9   0.1    2.2  2  PF00036.27 EF hand
    4.4e-10   38.4   0.1     0.0004   19.9   0.1    2.3  2  PF13405.1  EF-hand domain
    2.1e-08   33.0   1.3     0.0005   19.1   0.3    2.3  2  PF13202.1  EF hand
    2.8e-07   30.4   0.1      0.011   15.8   0.0    2.1  2  PF13499.1  EF-hand domain pair
      8e-05   22.2   0.2     0.0002   20.9   0.0    1.7  2  PF12763.2  Cytoskeletal-regulatory complex EF hand
    0.00099   18.5   0.7     0.0075   15.7   0.0    2.1  2  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.1   6.1e-09   1.4e-05       2      28 ..      69      95 ..      68      96 .. 0.92
   2 !   18.2   0.0   3.9e-07   0.00089       2      28 ..     116     142 ..     115     143 .. 0.91

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 6.1e-09
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                ++++F+++D+D +G I+++Efk++++ 
  MMETSP1325-20131115|1328_1 69 FEKLFELADVDASGGIDVDEFKQLYRL 95
                789********************9875 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 3.9e-07
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 l ++F+ +D D +G++++ E+ke++++
  MMETSP1325-20131115|1328_1 116 LADVFASMDDDSSGTVELTELKEWMSD 142
                 6689*********************85 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   1.7e-07    0.0004       2      27 ..      69      94 ..      68     101 .. 0.91
   2 !   16.4   0.0   2.3e-06    0.0052       2      28 ..     116     142 ..     115     150 .. 0.90

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.7e-07
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                ++++F+l D d +G id +E+++++r
  MMETSP1325-20131115|1328_1 69 FEKLFELADVDASGGIDVDEFKQLYR 94
                789********************998 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 2.3e-06
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 l ++F  +D+d +G++++ EL+ ++++
  MMETSP1325-20131115|1328_1 116 LADVFASMDDDSSGTVELTELKEWMSD 142
                 6789********************985 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.3   2.2e-07    0.0005       2      24 ..      70      92 ..      69      93 .. 0.93
   2 !   12.6   0.0   2.5e-05     0.056       2      23 ..     117     138 ..     116     141 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 2.2e-07
                HHHHHHH--S----B-HHHHHHH CS
   PF13202.1  2 kdtFrafDlNgDGkIsreELkrl 24
                +++F+ +D++ +G I+ +E+k+l
  MMETSP1325-20131115|1328_1 70 EKLFELADVDASGGIDVDEFKQL 92
                799******************98 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 2.5e-05
                 HHHHHHH--S----B-HHHHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreELkr 23 
                  d+F  +D + +G++   ELk+
  MMETSP1325-20131115|1328_1 117 ADVFASMDDDSSGTVELTELKE 138
                 689*****************97 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.6e-06     0.011      36      66 .]      63      93 ..      35      97 .. 0.79
   2 !   12.8   0.0   3.9e-05     0.089       1      26 [.     115     140 ..     100     144 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4.6e-06
   PF13499.1 36 eevrevldyifkelDkngdGvlsfeEflqai 66
                  +++v +++f+ +D + +G ++ +Ef q++
  MMETSP1325-20131115|1328_1 63 ATTQDVFEKLFELADVDASGGIDVDEFKQLY 93
                4566788999999999999999999999886 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 3.9e-05
   PF13499.1   1 klkeaFkllDkdgdgyldkeeLlrll 26 
                 +l ++F ++D d +g+++ +eL++++
  MMETSP1325-20131115|1328_1 115 RLADVFASMDDDSSGTVELTELKEWM 140
                 46677888888888888888888887 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   8.8e-08    0.0002      23      72 ..      45      96 ..      38     114 .. 0.80
   2 ?   -1.2   0.0      0.66   1.5e+03      43      65 ..     114     136 ..     106     158 .. 0.75

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 8.8e-08
   PF12763.2 23 dnkltgdkvapvlknsk..leedklekiwdladidedgkldfeefciamrli 72
                d+ l++ ++ap+  n +   ++d +ek+++lad+d  g +d +ef    rl+
  MMETSP1325-20131115|1328_1 45 DDWLAEAQAAPLPSNKEkaTTQDVFEKLFELADVDASGGIDVDEFKQLYRLL 96
                677888899988766541167899*********************9998886 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.66
   PF12763.2  43 dklekiwdladidedgkldfeef 65 
                  +l+ ++   d d+ g++++ e+
  MMETSP1325-20131115|1328_1 114 ARLADVFASMDDDSSGTVELTEL 136
                 56777887778888888877775 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.3e-06    0.0075      22      52 ..      64      94 ..      56      96 .. 0.84
   2 ?    1.2   0.1      0.11   2.5e+02      30      51 ..     119     140 ..     113     143 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 3.3e-06
   PF13833.1 22 lseeevdilfrefDtdgdGkisfeEFcvlle 52
                ++ + ++ lf ++D d +G i+ +EF++l +
  MMETSP1325-20131115|1328_1 64 TTQDVFEKLFELADVDASGGIDVDEFKQLYR 94
                56667899*******************9875 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.11
   PF13833.1  30 lfrefDtdgdGkisfeEFcvll 51 
                 +f  +D d +G + + E ++ +
  MMETSP1325-20131115|1328_1 119 VFASMDDDSSGTVELTELKEWM 140
                 67789*******9999987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 760.38
//
Query:       MMETSP1325-20131115|1331_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 409.03
//
Query:       MMETSP1325-20131115|1332_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.072   12.8   0.3      0.077   12.7   0.2    1.2  1  PF01145.20 SPFH domain / Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   5.6e-06     0.077      83     138 ..      31      86 ..       6     100 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.6e-06
  PF01145.20  83 aqeeenlenllrrllesalrevlsqmtldeilsnrselaaelknelneqlqkygie 138
                 + +ee   +ll + l sal e++++ +l e+++  +++++++++++n++++  g+e
  MMETSP1325-20131115|1332_1  31 KPKEEAEAALLASQLSSALGEQVGEDELGELMEVDDDIQKAVEDSFNAEFNYEGVE 86 
                 567788899****************************************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       585  (0.0427882); expected 273.4 (0.02)
Passed bias filter:                      431  (0.0315243); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 470.23
//
Query:       MMETSP1325-20131115|1335_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       590  (0.0431539); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.63
# Mc/sec: 353.75
//
Query:       MMETSP1325-20131115|1336_1  [L=410]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-32  111.2   0.0    4.6e-32  110.7   0.0    1.2  1  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
     0.0017   18.2   0.0     0.0056   16.5   0.0    1.9  1  PF01926.18 50S ribosome-binding GTPase
     0.0098   15.2   0.0      0.028   13.7   0.0    1.7  2  PF01695.12 IstB-like ATP binding protein
  ------ inclusion threshold ------
      0.019   13.5   0.0      0.028   13.0   0.0    1.2  1  PF06068.8  TIP49 C-terminus
      0.025   14.6   0.1       0.16   12.0   0.0    2.2  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.052   11.4   0.4      0.085   10.7   0.3    1.3  1  PF02724.9  CDC45-like protein
      0.084   11.5   3.7        0.7    8.5   2.5    2.0  1  PF03308.11 ArgK protein
        0.3    9.2   4.3        0.3    9.2   2.9    1.2  1  PF09726.4  Transmembrane protein


Domain annotation for each model (and alignments):
>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.7   0.0   2.7e-35   4.6e-32       3     176 ..     198     366 ..     196     368 .. 0.94

  Alignments for each domain:
  == domain 1    score: 110.7 bits;  conditional E-value: 2.7e-35
                 EEEE-------HHHHHHHHCHS---S-EEEEES-----HCCCCCHHT-S-.....EEEE----ECC-.TTS-HHHHHCCCHHHCH.-T-SEEEEE---.-SGGGGHHHHSHHHHHHEEE-EEEEEEETTTHCHHHHHHHHHHHHHCT-SEEEEE-CCCTTTT...HHHHHHHHHHH-TTSEE CS
  PF02492.14   3 tvltGflGsGKTtLleklleknreglkiaVivndfgetkiDaellretgve....ivelnnGciCct.lredllmelealeelke.erldvlliEttG.laepapltfteeelksdlgldavvtvvdvknltegedkpekledqlaaAdlivlnKiDlldae.adlekleedlrklnpeakv 176
                 + ++G++G GKT+Ll +l+++  +  ++a i+nd+  t +D+e+l+++++     i  +++G +++  +red++ +l a eel + ++l++l++E++G ++ + ++         +  +d++++v+dv   + g++ p+k +  ++++dl+++nK+Dl++   adl ++++d++k++ + ++
  MMETSP1325-20131115|1336_1 198 VGIGGPVGTGKTALLLALCRSMGKTHNMAAITNDIF-TREDGEFLTRHNALphdrIRAVETGGCPHAaIREDISANLLAAEELTAqHKLELLFVESGGdNLAANFS---------KELADFTIYVIDV---AGGDKVPRKGGPGITQSDLLIINKTDLAELIgADLGVMDRDAKKMRGDGPT 366
                 789*****************99999***********.********9996667888*************************99987799**********88888777.........99***********...*********************************************987665 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.3e-06    0.0056       2      85 ..     198     290 ..     197     360 .. 0.61

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 3.3e-06
                 EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSE.SE..EEE.......ETTEEEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEE CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrdi.te..nev.......kkekiilvDtPGiiegasedkeiegikkylekv.eradvlllvv 85 
                 v+i G   +GK++L+ aL+++   k+ +++  T di t+  +e+       ++++i  v t G  + a +++ i+    + e++  + ++ ll v
  MMETSP1325-20131115|1336_1 198 VGIGGPVGTGKTALLLALCRS-MGKTHNMAAITNDIfTRedGEFltrhnalPHDRIRAVETGGCPHAAIRED-ISANLLAAEELtAQHKLELLFV 290
                 8999***************86.89************555553334443333444466888888433333333.2211112222222223322222 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.7e-05     0.028      26      69 ..     174     217 ..     162     230 .. 0.87
   2 ?   -2.9   0.0       2.1   3.5e+03      69      91 ..     262     284 ..     261     322 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.7e-05
  PF01695.12  26 aargldkrlikelaslsfveqaenlvllGpsGvGKthlAialgv 69 
                 +  +++kr ++++ + +f e+a  + + Gp G+GKt l  al  
  MMETSP1325-20131115|1336_1 174 HPGEYSKRDTAQVTRKDFDERAFTVGIGGPVGTGKTALLLALCR 217
                 45568999******************************999976 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 2.1
  PF01695.12  69 veavraglsvlfvrledLveeLk 91 
                 ++a+r+++s+  + +e+L ++ k
  MMETSP1325-20131115|1336_1 262 HAAIREDISANLLAAEELTAQHK 284
                 67888888888888888876533 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.6e-05     0.028      53      90 ..     198     234 ..     156     243 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.6e-05
   PF06068.8  53 vLlaGppgtGktalaiaiskelgedvpfvalsgsevys 90 
                 v + Gp gtGktal +a+ +++g+    +a++  ++++
  MMETSP1325-20131115|1336_1 198 VGIGGPVGTGKTALLLALCRSMGKTHNMAAIT-NDIFT 234
                 6789*******************776666654.55665 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       0.8   1.4e+03       4      43 ..      13      56 ..      12      74 .. 0.60
   2 ?   12.0   0.0   9.1e-05      0.16       5      24 ..     202     221 ..     198     254 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.8
                E-------HHHHHHHHHHCT...HEEEEEECCSSS.SST-HHHH CS
  PF00004.24  4 yGppGtGKTllakavakelg...vefleisgsell.skyvgese 43
                +Gp   G+T +a+  a+++    + +l+++gs      ++++s 
  MMETSP1325-20131115|1336_1 13 WGPGHLGRTKTASLGARKATmdpMALLNFEGSAEElAAMMKKSG 56
                78888999999999999985334445555554433234444444 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 9.1e-05
                 -------HHHHHHHHHHCTH CS
  PF00004.24   5 GppGtGKTllakavakelgv 24 
                 Gp GtGKT+l  a+++++g 
  MMETSP1325-20131115|1336_1 202 GPVGTGKTALLLALCRSMGK 221
                 9****************973 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3     5e-05     0.085      86     235 ..      35     224 ..      33     226 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5e-05
   PF02724.9  86 PwnleNvfgasdqvivfddgdieeelekeeeerdayealve....mkeeeeeesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsnessl....................................akslrrrrrrereekeevlekyYaqgtsygesisllvYsLaselgredn 235
                 P+ l N+ g+ +++  +++++ +++ ++ee+ ++a+ a  +    ++++++ +s+ ++ s++   + e s++++ +s+s +++ +dd+ +++++     +++++                                      + ++r++ +  ++  ++ +++   g  +g+  + l+ +L+ ++g++ n
  MMETSP1325-20131115|1336_1  35 PMALLNFEGSAEELAAMMKKSGADTGNSEENAKRAAAAPCDpgctHDHSHDGHSHGHDHSHSHGHDHEHSKDKHGDSHSHSSHGHDDHGHEGHGHDGHDHKTKHGhdghdhghdhktkheghhdsgtkgdhghthehldhpGEYSKRDTAQVTRKDFDERAFTVGIGGPVGTGKTALLLALCRSMGKTHN 224
                 5566666666666666666666666666656666666655566654555555555555555555555555555555555555544444443333332222222223355566666666777777778888888887777776667777777777777777777777777777777777777777777765 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.5   0.00041       0.7      28     244 ..     194     404 ..     190     410 .] 0.65

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00041
                 --EEE--B-------HHHHHH---HHHH----EEEEEE-------------------TTTT-TTEEEEEE----.....-----HHHHHHHHHHHHH----EEEEE------HHHHHHTT-SS-EEEE---------------TTT-SEEEE----HHHHHHHHHHHHHHHHHS--SBTTB--EEEE-BTTTTB--HHHHHHHHHHHHHHH.H---HHHHHHH CS
  PF03308.11  28 ralvvGltGvPGaGkstlveklikelrrrGkrvavlavDPsspftGGsilGDrlRlerlavdegvfiRslasrG.....alGGlakktreviklldaaGfDvilvetvGvGqsevdiievadtvvlvtlpgaGDelqaikaGlleiaDilvvnkaDkeeaekaarelraaleleeekekeWrppvlktsavegeGidelvdaieehrevle.ktGlleekrre 244
                 ra  vG+ G  G+Gk  l+ +l  ++ +  +++a +  D       G  l      +r+++ +   iR++ ++G         ++++  ++ +l      + ++ve  G   +     e+ad ++ v+  ++GD++       +  +D+l++nk+D +e   a  +l ++ + + +k ++  p v   + ++g  +d ++++i++  +  + ++G +++k ++
  MMETSP1325-20131115|1336_1 194 RAFTVGIGGPVGTGKTALLLALCRSMGK-THNMAAITNDIFTR-EDGEFL------TRHNALPHDRIRAVETGGcphaaIREDISANLLAAEELTAQHKLELLFVESGGDNLAANFSKELADFTIYVIDVAGGDKVPRKGGPGITQSDLLIINKTDLAELIGA--DLGVM-DRDAKKMRGDGPTVFAQV-KNGVQMDAIIEHISNALKDAQaSAGSTKKKAKH 404
                 7889999999999999999999877654.46666677676544.445554......3344444444555555541111145566677777777888888899999999988888888999***************976555456779*********8765544..44433.444455555555555443.455556778888876655444045555555544 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.9   0.00017       0.3     232     357 ..      61     185 ..      33     409 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00017
   PF09726.4 232 pvkksknahslkkisasalserkekgkdkaknssdkkkekkelqqknhhasksksvqsyssklqeievkenvsnkskksseslagsaeelalkkdsnsssaeeksakskssksaktskrsksnssp 357
                 +++++ +++   +     + ++++ g+++ + +s+++ + +e+++++h  s+s+s + ++ + +e + ++ +  k k+  +    ++++ + k++ +  s +++  +  + + ++ ++ sk ++  
  MMETSP1325-20131115|1336_1  61 NSEENAKRAAAAPCDPGCTHDHSHDGHSHGHDHSHSHGHDHEHSKDKHGDSHSHSSHGHDDHGHEGHGHDGHDHKTKHGHD-GHDHGHDHKTKHEGHHDSGTKGDHGHTHEHLDHPGEYSKRDTAQ 185
                 333333444444444445666777777777777777778889999999999999988888888888888888888777777.66777788888887777777777777666666656655555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       671  (0.0490784); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.95u 0.40s 00:00:01.35 Elapsed: 00:00:00.68
# Mc/sec: 1444.86
//
Query:       MMETSP1325-20131115|1337_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      7e-11   40.9   0.7    6.4e-08   31.2   0.0    2.9  3  PF11885.3 Protein of unknown function (DUF3405)


Domain annotation for each model (and alignments):
>> PF11885.3  Protein of unknown function (DUF3405)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.4   0.1    0.0024        33     221     247 ..      21      47 ..       3      49 .. 0.83
   2 !   31.2   0.0   4.7e-12   6.4e-08     319     409 ..      49     139 ..      45     145 .. 0.87
   3 !    5.0   0.0   0.00039       5.3     479     500 ..     170     190 ..     140     191 .. 0.68

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.0024
   PF11885.3 221 peydffwnwEmDvRytGhyyeflekle 247
                 ++ + +w +E D+ +tG+y+++l +l+
  MMETSP1325-20131115|1337_1  21 EQTERLWVIEDDTVFTGDYEKMLRTLN 47 
                 556789***************998876 PP

  == domain 2    score: 31.2 bits;  conditional E-value: 4.7e-12
   PF11885.3 319 gvgeeADlItlnpifdpegsgWvlendvt.gyset.gstpRrasiitasRlSrrLleamheetaekkhslfsEmlpatlaLhhglKavyaphP 409
                 g+ ++ DlIt++ i  p  ++Wv++ +++ g+++     +  ++ +t   +Sr+ l  + e ++++    + E +pat+aL  g++  y++hP
  MMETSP1325-20131115|1337_1  49 GLPKDSDLITFKDI-SPIPENWVWARQMHeGFNDLsVPGEGAMTWMTFYGISRKFLSRLTELQLKGVT-GHIEWFPATIALREGFRMTYVQHP 139
                 67789*******98.69*******988753896663455678899999***************98766.99*********************9 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.00039
   PF11885.3 479 eeaeleeegrvclppmllhpik 500
                 e+++ + eg  c pp+llhp+k
  MMETSP1325-20131115|1337_1 170 EAWK-TAEGGFCAPPLLLHPLK 190
                 3344.899************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.33s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 1249.16
//
Query:       MMETSP1325-20131115|1340_1  [L=480]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-13   51.3   0.9    1.3e-13   51.3   0.6    4.1  3  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
    1.7e-10   40.1   0.1    3.3e-10   39.2   0.1    1.5  1  PF07653.12 Variant SH3 domain
    2.8e-08   32.8   0.5    5.8e-08   31.8   0.3    1.6  1  PF00018.23 SH3 domain
    7.2e-07   28.4   2.6     0.0021   17.4   0.0    2.8  2  PF02205.15 WH2 motif
  ------ inclusion threshold ------
       0.01   15.3   0.1       0.02   14.4   0.1    1.4  1  PF08239.6  Bacterial SH3 domain


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -15.0  15.2         5   1.4e+04      79     109 ..      96     134 ..       2     193 .. 0.60
   2 !   51.3   0.6   4.8e-17   1.3e-13      66     146 ..     253     324 ..     195     326 .. 0.81
   3 ?   -3.2   2.4       2.9   7.9e+03      73      77 ..     397     401 ..     337     463 .. 0.52

  Alignments for each domain:
  == domain 1    score: -15.0 bits;  conditional E-value: 5
   PF10152.4  79 raeaaaqeaeaaraetpaeqe........pealaegrlt 109
                 rae aa ++e+++ae+ a +e        + + ++++++
  MMETSP1325-20131115|1340_1  96 RAELAALKEEQEAAEQAALEEirraeaenEAKRQQAKVD 134
                 333232222222222222222434333322222223333 PP

  == domain 2    score: 51.3 bits;  conditional E-value: 4.8e-17
   PF10152.4  66 arrsggpppppgaraeaaaqeaeaaraetpaeqepealaegrltvrkdpryakYfkmlklgVpaeavknKmqaeGldpell 146
                 +rr   pppppg     +++++ a+ + tpae+ p     +++  ++dp+y+k+fkml++ +p  av +Km++eGldp++l
  MMETSP1325-20131115|1340_1 253 SRRGFVPPPPPG-----KPKKEAAPVVDTPAETSPA----NDNPYANDPQYSKFFKMLQMHLPLGAVEQKMRSEGLDPSVL 324
                 344444445555.....5555555555666655544....79999*********************************998 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 2.9
   PF10152.4  73 ppppg 77 
                 p p++
  MMETSP1325-20131115|1340_1 397 PRPAP 401
                 22222 PP

>> PF07653.12  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.1   1.2e-13   3.3e-10       2      54 ..     196     248 ..     195     249 .. 0.90

  Alignments for each domain:
  == domain 1    score: 39.2 bits;  conditional E-value: 1.2e-13
                 EEE-S-B--SS---..--B----EEEEE.E-S----BEEEE-TT---B--HHHHH CS
  PF07653.12   2 vraiedyvaedpee..LslkkGDvikvlgskesdgwwegesgGrvGlfPsslVee 54 
                 ++++++++a d  e  +s+++G++++v+ ++++dgwwe++ gGr G +P s++e+
  MMETSP1325-20131115|1340_1 196 AKVLFEFEADD-DEwqISVQEGETVAVI-EQNDDGWWEVTAGGRTGCVPGSYLEI 248
                 699******44.4447************.***********************987 PP

>> PF00018.23  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.3   2.1e-11   5.8e-08       1      47 [.     197     242 ..     197     243 .. 0.94

  Alignments for each domain:
  == domain 1    score: 31.8 bits;  conditional E-value: 2.1e-11
                 EESS-BE-SS.TTS-EB-TT-EEEEEEESSSSEEEEEETTTTB---EE CS
  PF00018.23   1 iAlYDYeare.sdELsfkkGDviivleksedgWwkgrlkgtgkeGliP 47 
                 ++l+++ea + +  +s ++G+++ v+e+++dgWw++     g++G +P
  MMETSP1325-20131115|1340_1 197 KVLFEFEADDdEWQISVQEGETVAVIEQNDDGWWEVTAG--GRTGCVP 242
                 689*******888*************************9..79****9 PP

>> PF02205.15  WH2 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.6   0.00019      0.52       1      23 [.     368     389 ..     368     393 .. 0.85
   2 !   17.4   0.0   7.7e-07    0.0021       2      25 ..     403     423 ..     402     426 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00019
  PF02205.15   1 ggggRsALLsdIrkGg.kiqLKKv 23 
                 gggg + LL+ I++G     L+ +
  MMETSP1325-20131115|1340_1 368 GGGGMGGLLAGIQAGAsG--LRSA 389
                 689************866..8876 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 7.7e-07
  PF02205.15   2 gggRsALLsdIrkGgkiqLKKvae 25 
                 +gg s +L++I++G+k  L Kv +
  MMETSP1325-20131115|1340_1 403 AGGMSSMLAAIQGGVK--LNKV-T 423
                 7999**********66..****.4 PP

>> PF08239.6  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   7.2e-06      0.02      18      51 ..     212     246 ..     210     247 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 7.2e-06
   PF08239.6  18 qlpkGekvtvlgeeng.WykieyngktGYvssdyv 51 
                 ++++Ge+v v++++++ W +++ +g tG v + y+
  MMETSP1325-20131115|1340_1 212 SVQEGETVAVIEQNDDgWWEVTAGGRTGCVPGSYL 246
                 5899*********6666***********9998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1915  (0.140067); expected 273.4 (0.02)
Passed bias filter:                      476  (0.0348157); expected 273.4 (0.02)
Passed Vit filter:                       119  (0.00870392); expected 13.7 (0.001)
Passed Fwd filter:                        49  (0.00358397); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.78u 0.40s 00:00:02.18 Elapsed: 00:00:01.26
# Mc/sec: 912.90
//
Query:       MMETSP1325-20131115|1342_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-17   59.7   1.5    7.8e-09   34.6   0.1    2.8  3  PF00515.23 Tetratricopeptide repeat
      3e-14   52.2   3.1    6.5e-14   51.2   1.0    2.0  2  PF13414.1  TPR repeat
    4.7e-13   47.8   2.4    5.8e-07   28.8   0.1    3.1  3  PF07719.12 Tetratricopeptide repeat
      1e-10   40.4   1.0      9e-07   28.1   0.3    2.9  3  PF13181.1  Tetratricopeptide repeat
    2.8e-10   39.0   0.4    3.7e-05   23.0   0.0    2.6  2  PF13176.1  Tetratricopeptide repeat
    2.9e-09   36.2   5.3    2.7e-06   27.0   0.1    2.9  3  PF13431.1  Tetratricopeptide repeat
    6.2e-09   35.5   3.1      2e-08   33.9   1.1    2.3  2  PF13424.1  Tetratricopeptide repeat
    9.5e-07   28.8   0.2     0.0017   18.6   0.1    2.7  2  PF13428.1  Tetratricopeptide repeat
    1.1e-05   25.8   1.2     0.0081   16.6   0.1    2.5  2  PF13432.1  Tetratricopeptide repeat
    1.9e-05   24.6   0.8       0.29   11.5   0.0    2.8  2  PF13174.1  Tetratricopeptide repeat
     0.0032   17.2  11.5      0.004   16.9   0.3    3.1  3  PF13374.1  Tetratricopeptide repeat
     0.0098   15.6   0.4       0.89    9.3   0.2    2.7  2  PF13371.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.09   12.5   0.2       0.27   11.0   0.0    1.8  2  PF05355.6  Apolipoprotein C-II
       0.11   12.4   0.0       0.22   11.4   0.0    1.5  1  PF12688.2  Tetratrico peptide repeat
       0.12   12.3   0.3       0.21   11.6   0.2    1.3  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3


Domain annotation for each model (and alignments):
>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   3.6e-08   3.3e-05       1      29 [.       4      32 ..       4      35 .. 0.95
   2 !   34.6   0.1   8.6e-12   7.8e-09       1      34 []      38      71 ..      38      71 .. 0.96
   3 ?    0.3   0.0      0.58   5.2e+02      16      29 ..      70      83 ..      70      85 .. 0.83

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 3.6e-08
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23  1 akalynlGnaylklgkydeAleyyekALe 29
                a a+ynlG+a +++ ++  A++ y+ AL+
  MMETSP1325-20131115|1342_1  4 AIAYYNLGVAWQSMDNLTRAVDSYRNALT 32
                68*************************96 PP

  == domain 2    score: 34.6 bits;  conditional E-value: 8.6e-12
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  1 akalynlGnaylklgkydeAleyyekALelnPnn 34
                ++a++n+G+a+++lg+ deA+ +y+ AL+ +P++
  MMETSP1325-20131115|1342_1 38 PDAYNNMGYALMSLGRIDEAISAYKSALRYRPEF 71
                68****************************9986 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.58
                -HHHHHHHHHHHHH CS
  PF00515.23 16 kydeAleyyekALe 29
                +++ A e  ++A+ 
  MMETSP1325-20131115|1342_1 70 EFESARENLDRAIA 83
                58899999999997 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   1.0   7.1e-17   6.5e-14       2      69 .]       3      69 ..       2      69 .. 0.96
   2 ?    0.2   0.0      0.57   5.2e+02      54      67 ..      71      84 ..      70      86 .. 0.79

  Alignments for each domain:
  == domain 1    score: 51.2 bits;  conditional E-value: 7.1e-17
   PF13414.1  2 nAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                 A a+++lG a  ++ ++  A++ y++Al  + +++++y+n+++a++ lg + +eA+ +y+ Al+++P
  MMETSP1325-20131115|1342_1  3 YAIAYYNLGVAWQSMDNLTRAVDSYRNALTCQTDYPDAYNNMGYALMSLG-RIDEAISAYKSALRYRP 69
                589***********************************************.68************988 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.57
   PF13414.1 54 yeeAledyekAlel 67
                +e+A+e++++A++ 
  MMETSP1325-20131115|1342_1 71 FESARENLDRAIAV 84
                78899999999876 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     4e-06    0.0037       1      29 [.       4      32 ..       4      37 .. 0.93
   2 !   28.8   0.1   6.3e-10   5.8e-07       1      33 [.      38      70 ..      38      71 .. 0.95
   3 ?    1.4   0.0      0.39   3.5e+02      17      29 ..      71      83 ..      70      85 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 4e-06
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  1 aealynlGlayyklgdyeeAleafekAle 29
                a a+ynlG a+  ++++ +A++ ++ Al 
  MMETSP1325-20131115|1342_1  4 AIAYYNLGVAWQSMDNLTRAVDSYRNALT 32
                689************************96 PP

  == domain 2    score: 28.8 bits;  conditional E-value: 6.3e-10
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  1 aealynlGlayyklgdyeeAleafekAleldPn 33
                ++a++n+G+a++ lg+ +eA+ a++ Al++ P+
  MMETSP1325-20131115|1342_1 38 PDAYNNMGYALMSLGRIDEAISAYKSALRYRPE 70
                689***************************997 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.39
                HHHHHHHHHHHHH CS
  PF07719.12 17 yeeAleafekAle 29
                +e A+e +++A++
  MMETSP1325-20131115|1342_1 71 FESARENLDRAIA 83
                899*******997 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0    0.0008      0.73       3      29 ..       6      32 ..       4      37 .. 0.93
   2 !   28.1   0.3   9.9e-10     9e-07       2      32 ..      39      69 ..      38      72 .. 0.94
   3 ?   -2.9   0.0       8.1   7.4e+03      14      25 ..     160     171 ..     159     173 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0008
                -TTT---HHHHTT-HHHHHHHHH---H CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekale 29
                ayynlG +  ++ +   A  +++ al 
  MMETSP1325-20131115|1342_1  6 AYYNLGVAWQSMDNLTRAVDSYRNALT 32
                7************************96 PP

  == domain 2    score: 28.1 bits;  conditional E-value: 9.9e-10
                --TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelkp 32
                 ay+n+G+++++lG++d+A+++++ al + p
  MMETSP1325-20131115|1342_1 39 DAYNNMGYALMSLGRIDEAISAYKSALRYRP 69
                58***************************98 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 8.1
                 TT-HHHHHHHHH CS
   PF13181.1  14 lGdydkAkeyle 25 
                 lG+ ++++++++
  MMETSP1325-20131115|1342_1 160 LGRLSSSMQSFW 171
                 789999999885 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   3.9e-05     0.036       1      27 [.       6      32 ..       6      39 .. 0.88
   2 !   23.0   0.0   4.1e-08   3.7e-05       1      33 [.      40      70 ..      40      73 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 3.9e-05
   PF13176.1  1 allnLarlysrlgdyekAielyeraLa 27
                a++nL+++++++ +  +A++ y+ aL 
  MMETSP1325-20131115|1342_1  6 AYYNLGVAWQSMDNLTRAVDSYRNALT 32
                79**********************653 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 4.1e-08
   PF13176.1  1 allnLarlysrlgdyekAielyeraLaltkdpl 33
                a++n++ + ++lg+ ++Ai++y+   al++ p+
  MMETSP1325-20131115|1342_1 40 AYNNMGYALMSLGRIDEAISAYKS--ALRYRPE 70
                89**********************..9999987 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.2   0.00036      0.32      11      32 ..       2      23 ..       1      25 [. 0.89
   2 !   27.0   0.1   2.9e-09   2.7e-06       2      33 ..      27      58 ..      26      59 .. 0.97
   3 ?   -1.8   0.0       4.9   4.4e+03       1      18 [.      60      77 ..      60      78 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00036
   PF13431.1 11 nnadaynnLAelllnnGdleeA 32
                n+a ay+nL++++++  +l +A
  MMETSP1325-20131115|1342_1  2 NYAIAYYNLGVAWQSMDNLTRA 23
                789***********99998877 PP

  == domain 2    score: 27.0 bits;  conditional E-value: 2.9e-09
   PF13431.1  2 yekaleldPnnadaynnLAelllnnGdleeAe 33
                y++al ++ +++daynn++++l ++G+ +eA+
  MMETSP1325-20131115|1342_1 27 YRNALTCQTDYPDAYNNMGYALMSLGRIDEAI 58
                9*****************************97 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 4.9
   PF13431.1  1 lyekaleldPnnadaynn 18
                +y+ al++ P+   a+ n
  MMETSP1325-20131115|1342_1 60 AYKSALRYRPEFESAREN 77
                599999999987666666 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   1.1   2.2e-11     2e-08       3      76 ..       2      68 ..       1      70 [. 0.92
   2 ?   -0.4   0.0       1.1     1e+03      62      74 ..      71      83 ..      68      87 .. 0.60

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 2.2e-11
   PF13424.1  3 dlatilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                ++a++++nl+ + + + ++ +A + y+ al+ +        d+ +a+nn++++++ lg+ deA+  ++ Al+ +
  MMETSP1325-20131115|1342_1  2 NYAIAYYNLGVAWQSMDNLTRAVDSYRNALTCQ-------TDYPDAYNNMGYALMSLGRIDEAISAYKSALRYR 68
                6899**************************996.......567889*************************976 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 1.1
   PF13424.1 62 ydeAleylekAle 74
                +++A+e l +A++
  MMETSP1325-20131115|1342_1 71 FESARENLDRAIA 83
                4555555555554 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00023      0.21       3      43 ..       6      46 ..       4      47 .. 0.92
   2 !   18.6   0.1   1.9e-06    0.0017       1      41 [.      38      78 ..      38      81 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00023
   PF13428.1  3 allalarallalGdpdeAiallrralalaPddaealllLar 43
                a++ l+ a   + ++ +A++ +r al  + d ++a+ ++++
  MMETSP1325-20131115|1342_1  6 AYYNLGVAWQSMDNLTRAVDSYRNALTCQTDYPDAYNNMGY 46
                899************************99999**9988876 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 1.9e-06
   PF13428.1  1 peallalarallalGdpdeAiallrralalaPddaealllL 41
                p+a+  ++ al+ lG+ deAi +++ al+  P+ + a+ +L
  MMETSP1325-20131115|1342_1 38 PDAYNNMGYALMSLGRIDEAISAYKSALRYRPEFESARENL 78
                68999****************************99998766 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0063       5.8      30      62 ..       3      38 ..       1      41 [. 0.84
   2 !   16.6   0.1   8.9e-06    0.0081       3      37 ..      44      78 ..      42      84 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0063
   PF13432.1 30 aaeallllaeallrlgrldeAaallraal...alaP 62
                +a a+++l++a   + +l +A+  +r al     +P
  MMETSP1325-20131115|1342_1  3 YAIAYYNLGVAWQSMDNLTRAVDSYRNALtcqTDYP 38
                688**********************99995555555 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 8.9e-06
   PF13432.1  3 lArallraGdydeAlaaleaalalaPeaaeallll 37
                 + al+ +G+ deA+ a++ al++ Pe   a+ +l
  MMETSP1325-20131115|1342_1 44 MGYALMSLGRIDEAISAYKSALRYRPEFESARENL 78
                6899**********************998887665 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00032      0.29       2      27 ..       6      31 ..       5      32 .. 0.94
   2 !   10.9   0.1   0.00052      0.47       5      31 ..      43      69 ..      35      70 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00032
                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  2 AlyklalsyyklgdtdeAlealerli 27
                A+y+l+ + + +++ ++A++ +++ +
  MMETSP1325-20131115|1342_1  6 AYYNLGVAWQSMDNLTRAVDSYRNAL 31
                9*********************9986 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00052
                HHHHHHHHHHHHHHHHHHHHHHHHH-T CS
   PF13174.1  5 klalsyyklgdtdeAlealerlikeyP 31
                ++++++  lg+ deA+ a++  ++  P
  MMETSP1325-20131115|1342_1 43 NMGYALMSLGRIDEAISAYKSALRYRP 69
                79******99************99988 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.2    0.0046       4.2       2      31 ..       4      33 ..       3      35 .. 0.90
   2 !   16.9   0.3   4.3e-06     0.004       3      32 ..      39      68 ..      39      68 .. 0.96
   3 ?   -1.8   0.6       3.2   2.9e+03      34      42 .]     124     132 ..     122     132 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0046
   PF13374.1  2 aaalnnLAlalrargryeeAlaleeealai 31
                a a+ nL++a + ++++ +A++ ++ al+ 
  MMETSP1325-20131115|1342_1  4 AIAYYNLGVAWQSMDNLTRAVDSYRNALTC 33
                6799******************99999986 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 4.3e-06
   PF13374.1  3 aalnnLAlalrargryeeAlaleeealair 32
                +a+nn + al+ +gr +eA   +  al +r
  MMETSP1325-20131115|1342_1 39 DAYNNMGYALMSLGRIDEAISAYKSALRYR 68
                69*************************998 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 3.2
   PF13374.1  34 rllGddHPd 42 
                 ++ G++HP+
  MMETSP1325-20131115|1342_1 124 AHIGAHHPH 132
                 689*****6 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.018        16      33      62 ..       1      30 [.       1      41 [. 0.76
   2 !    9.3   0.2   0.00098      0.89      17      61 ..      26      70 ..      21      99 .. 0.76

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.018
   PF13371.1 33 RDrGlllaqlgclaaAaedLeaflelcpda 62
                R ++++++ lg   + ++ L++++++ ++a
  MMETSP1325-20131115|1342_1  1 RNYAIAYYNLGVAWQSMDNLTRAVDSYRNA 30
                677888999999888888888888876654 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00098
   PF13371.1 17 vverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpd 61
                 +   l ++ d p  +   G++l+ lg+  +A+ ++  +l   p+
  MMETSP1325-20131115|1342_1 26 SYRNALTCQTDYPDAYNNMGYALMSLGRIDEAISAYKSALRYRPE 70
                556678888888999999999999999999999999998866662 PP

>> PF05355.6  Apolipoprotein C-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       6.6     6e+03      15      26 ..      51      62 ..      46      66 .. 0.69
   2 ?   11.0   0.0   0.00029      0.27       4      29 ..     147     174 ..     144     182 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 6.6
   PF05355.6 15 LtqvqeslssyW 26
                L+++ e++s+y 
  MMETSP1325-20131115|1342_1 51 LGRIDEAISAYK 62
                667777777774 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00029
   PF05355.6   4 sqqdep..tspaLLtqvqeslssyWdsa 29 
                 +q+de+  +s ++L+++  s++s+W +a
  MMETSP1325-20131115|1342_1 147 QQDDESgeGSEDVLGRLSSSMQSFWGAA 174
                 44555433699**************998 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00025      0.22       3      76 ..       6      74 ..       4      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00025
   PF12688.2  3 alferagarDstGeeakAvplYrrAlaaGLagarrrratiqlaSsLRnlGrveeslalleaelaeapgdeldda 76
                a ++ + a+ s  + ++Av+ Yr+Al     ++  + a+  ++ +L  lGr++e++   +++l+ +p+  +++a
  MMETSP1325-20131115|1342_1  6 AYYNLGVAWQSMDNLTRAVDSYRNALTC---QTDYPDAYNNMGYALMSLGRIDEAISAYKSALRYRPE--FESA 74
                678999999*****************85...6677899999***************999999987554..4444 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   0.00023      0.21      27      83 ..       6      63 ..       2      64 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00023
                CHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2 27 ylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83
                ++y+l+ + +++ + +rA++ +r+ l  +   +++   ++ +l  lg+ deAi+++++
  MMETSP1325-20131115|1342_1  6 AYYNLGVAWQSMDNLTRAVDSYRNaLTCQTDYPDAYNNMGYALMSLGRIDEAISAYKS 63
                578889999999999999999976555555554444466****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.62
# Mc/sec: 765.29
//
Query:       MMETSP1325-20131115|1343_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 1054.40
//
Query:       MMETSP1325-20131115|1339_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.64
# Mc/sec: 1209.41
//
Query:       MMETSP1325-20131115|1334_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.1   0.1      0.023   14.2   0.1    1.4  1  PF10313.4 Uncharacterised protein domain (DUF2415)


Domain annotation for each model (and alignments):
>> PF10313.4  Uncharacterised protein domain (DUF2415)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   1.7e-06     0.023      20      39 ..      53      73 ..      52      74 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.7e-06
   PF10313.4 20 isEhvGrvHlvDlRt.gfdeh 39
                 +EhvG+ ++vD+R+ ++++h
  MMETSP1325-20131115|1334_1 53 NTEHVGKGGMVDTRDpETMTH 73
                59************9989888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.70
# Mc/sec: 328.64
//
Query:       MMETSP1325-20131115|1344_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.66
# Mc/sec: 395.76
//
Query:       MMETSP1325-20131115|1347_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.2    4.7  12.6        7.1    4.6   8.8    1.0  1  PF09770.4 Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   8.8   0.00052       7.1     170     265 ..      48     141 ..       8     153 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.00052
   PF09770.4 170 qaqqlpqppaqvlpqqspprqaalpqqakpelpsqypqppqqlqqevqqqlqqapsqapaqapl.paqlpqqlqnlqqqqlpqlsqqmppqpvqppq 265
                  a+   +pp++ +p q p+  +  p+++++   s+ +     lqq++ + ++  p+ a++ + +   +  qq+q+++q+q  +  ++m +++ q+++
  MMETSP1325-20131115|1347_1  48 GASTASTPPQNPMPPQNPMGGMGAPSMGMQRTHSNSGA---TLQQGMGMGFNGSPQVAQQRHTYaGGMGGQQQQAMGQPQGFGAFDNMGQPQAQQQP 141
                 33334455555555555555555554444444433333...55777778999999888888888778888888888887777777777666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.74
# Mc/sec: 518.13
//
Query:       MMETSP1325-20131115|1346_1  [L=367]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-34  119.6   0.1    1.2e-34  119.6   0.0    2.7  2  PF01145.20 SPFH domain / Band 7 family
  ------ inclusion threshold ------
      0.047   13.2   0.4      0.088   12.3   0.3    1.4  1  PF08934.5  Rb C-terminal domain
        0.1   10.5   0.3       0.18    9.7   0.0    1.4  2  PF04409.7  Protein of unknown function (DUF530)


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.6   0.0   2.7e-38   1.2e-34       2     179 .]      58     228 ..      57     228 .. 0.99
   2 ?   -9.1   7.8         3   1.4e+04     162     178 ..     256     271 ..     230     283 .. 0.51

  Alignments for each domain:
  == domain 1    score: 119.6 bits;  conditional E-value: 2.7e-38
  PF01145.20   2 tvepgevgvvvrfGkvkrvlepGlhfklPfgekvtvvstrvqtldvsdesvtvptkDglnvtvdvtvryrvsdakkliaavaqeeenlenllrrllesalrevlsqmtldeilsnrselaaelknelneqlqkygievvdvritdvdpppevkqalakkqaaeaeaaeaeiaraeaea 179
                 +v +g+v +++rfGk+k +l+pG+hfk+P+++k   v t+ ++ld ++  ++ +t+D+++v+ d++v+yr+ d+  +++ v    +nl+  +++l+++++r+ +++ +ld+ +s r+ l   l n+l+e  + +g+ +++v i++++p +e+ +++++++ ae+++ +a i r+e+e+
  MMETSP1325-20131115|1346_1  58 IVTQGNVRLLERFGKYKTTLDPGFHFKIPLVDKARPVTTKEIVLDTPP--QNCITADNAPVSADAVVYYRIFDPVLAAYGV----ANLNLAISNLVKTQIRSEIGKLSLDDTFSARETLGTVLLNSLQEPTDAWGVSITRVEIQEITPRKEILNSMEQVMSAERDK-RANILRSEGER 228
                 79999*******************************************..*******************************....*********************************************************************************.********995 PP

  == domain 2    score: -9.1 bits;  conditional E-value: 3
  PF01145.20 162 aaeaeaaeaeiaraeae 178
                 aaea+a  a++ +aeae
  MMETSP1325-20131115|1346_1 256 AAEADA-AARLLQAEAE 271
                 333333.4444444444 PP

>> PF08934.5  Rb C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   1.9e-05     0.088      47     150 ..     190     299 ..     181     303 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.9e-05
   PF08934.5  47 srlsptvmtprsrilvsiGesfGtaekfqkinqmvsssdrslkrsl...dsssalkplkrlrfdvdGqdeadgsks....ggeskliqklaelsstrsrmqeqklkeeadt 150
                 +r+  + +tpr  il s+ e+  +ae+ ++ n + s+++r+ +  +   ++ +a++     +  +    ead + +      e+  i k ae  +t +rm  +  k+  ++
  MMETSP1325-20131115|1346_1 190 TRVEIQEITPRKEILNSM-EQVMSAERDKRANILRSEGERLSRSNVaaaEADAAVQEAEAAKKATVLAAEADAAARllqaEAEADAIVKAAEAEATSTRMAAEATKDALES 299
                 67778899*******998.88899**************998776551115555555544444444445566655332222778999**************99999988775 PP

>> PF04409.7  Protein of unknown function (DUF530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   3.8e-05      0.18     424     490 ..     149     218 ..     136     223 .. 0.82
   2 ?   -3.4   0.1      0.36   1.6e+03      85     105 ..     286     306 ..     271     331 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 3.8e-05
   PF04409.7 424 felEeklkklkiklkrl...alGgvaLylisdidveevaeilkvdieellkkkavisglkevlkdkvevk 490
                  ++ +++ kl ++        lG v+L++ ++ +      i +v+i+e++ +k +++ +++v+ ++ +++
  MMETSP1325-20131115|1346_1 149 TQIRSEIGKLSLDDTFSareTLGTVLLNSLQEPTDAWGVSITRVEIQEITPRKEILNSMEQVMSAERDKR 218
                 555555555555533223449*******************************************999886 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 0.36
   PF04409.7  85 lrrkasekkniLervksAiva 105
                  r+ a+  k +Le + sA++ 
  MMETSP1325-20131115|1346_1 286 TRMAAEATKDALESIASALSG 306
                 566777777777777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       951  (0.0695582); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.73
# Mc/sec: 1204.74
//
Query:       MMETSP1325-20131115|1348_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-19   68.7   0.1    2.3e-19   68.4   0.0    1.1  1  PF01423.17 LSM domain
  ------ inclusion threshold ------
      0.079   12.7   0.1        0.1   12.3   0.0    1.2  1  PF11451.3  Protein of unknown function (DUF3202)


Domain annotation for each model (and alignments):
>> PF01423.17  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.4   0.0   3.4e-23   2.3e-19       3      68 .]      17      83 ..      15      83 .. 0.95

  Alignments for each domain:
  == domain 1    score: 68.4 bits;  conditional E-value: 3.4e-23
                HHHHTTS-EEEEETTTEEEE-EEEEEETTCEEEEEEEEEEE...EEE...EE.EEEEEGGGEEEEEE CS
  PF01423.17  3 lqelinkrVtvelkngreveGtLkafDkfmNlvLrdvtetwkrkkknk.relgqiliRGenivlvsl 68
                + ++i++r++v++k+++e++GtL++fD+++N+vL+dvte+   ++ ++ ++l+qil+ G+ni l+++
  MMETSP1325-20131115|1348_1 17 IDKCIGSRLWVIMKGDKELVGTLRGFDDYVNMVLDDVTEYEITPEGRQaTKLDQILLNGNNIALLVP 83
                7899************************************999999889**************9876 PP

>> PF11451.3  Protein of unknown function (DUF3202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.5e-05       0.1      10      53 ..      19      64 ..      14      81 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.5e-05
                HH----EEEE-------E-EEEEE-SS-.EEEEEEE--.------E CS
   PF11451.3 10 eWkGqkvavsvGseisfsGiledfdeev.illkdvvdv.iGnkake 53
                +  G ++ v + ++  + G+l  fd+ v ++l dv+++ i   +++
  MMETSP1325-20131115|1348_1 19 KCIGSRLWVIMKGDKELVGTLRGFDDYVnMVLDDVTEYeITPEGRQ 64
                5568999999****************9956799***9944444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.65
# Mc/sec: 420.28
//
Query:       MMETSP1325-20131115|1350_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 324.67
//
Query:       MMETSP1325-20131115|1349_1  [L=491]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-60  202.6   0.0    7.1e-60  202.0   0.0    1.3  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain
    3.6e-17   62.7   0.4    1.1e-16   61.1   0.2    1.9  2  PF00306.22 ATP synthase alpha/beta chain, C terminal domain
      1e-12   47.9   0.9    1.9e-12   47.1   0.6    1.5  1  PF02874.18 ATP synthase alpha/beta family, beta-barrel domain
  ------ inclusion threshold ------
      0.024   13.5   0.0      0.038   12.8   0.0    1.2  1  PF04481.7  Protein of unknown function (DUF561)


Domain annotation for each model (and alignments):
>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.0   0.0   2.1e-63   7.1e-60       1     215 []     143     369 ..     143     369 .. 0.98

  Alignments for each domain:
  == domain 1    score: 202.0 bits;  conditional E-value: 2.1e-63
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00006.20   1 tgirvlDslfPivqGqttlipGafgcGktvisqslskns.............nsdaiiyvgiGergnevaevleefrkepimkrttlvantsnepvaareasiytgitlAeyfrd.qgknVlliaDslsrwaealreisgrlgempadqgypaylgaklaslyeRagkagspdriGSvtivaavspaggdfsdpvttstlgitdvfivLdkklaqrkhfPaintlvSyS 215
                 tgi+++D++ +i++Gq++ +++a+g++++ +++++++++             ++ a+++ ++G + ++++ + ++f++++ ++rt+l++n +n+p+ +r++++++++t+Aey+++ + ++Vl+i++++s +a+alre+s++ +e+p+++gyp+y++++l+++yeRag++    r+GS+t++++++++++d+++p+++ t +it+++i+Ld+++ ++++fP in+l S+S
  MMETSP1325-20131115|1349_1 143 TGISAIDVMNSIARGQKIPLFSAAGLPHNEVAAQIARQAslvqlkdtmdsheDNFAMVFGAMGVNMETARFFRNDFEESGSIARTALFLNLANDPTIERIITPRLALTTAEYLAYeRDYHVLCILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV--VGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRNMQNKEIFPPINVLPSLS 369
                 8*********************************************99996556666**********************************************************99****************************************************..9*******************************************************98 PP

>> PF00306.22  ATP synthase alpha/beta chain, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.4   4.9e+03      46      55 ..      33      42 ..      29      92 .. 0.75
   2 !   61.1   0.2   3.2e-20   1.1e-16       2     105 ..     387     480 ..     386     488 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.4
                HT---TTGGG CS
  PF00306.22 46 fLkQnqyspl 55
                  kQ+q+ ++
  MMETSP1325-20131115|1349_1 33 SVKQPQFAEI 42
                4799999887 PP

  == domain 2    score: 61.1 bits;  conditional E-value: 3.2e-20
                 HHHHHHHHHHHHHHHHHCCHHH--.TTS-HHHHHHHHHHHHHHH.HT---TTGGG.......-.HHHHHHHHHHCC----TTS-GGGHHHHHHHHHHH.HHHHHHH CS
  PF00306.22   2 qvagklkleLaqyrElaafvqlvGsdaLseedkltlerarrlee.fLkQnqysplpvekqvvsiveetidlfyallrgklddlpeeelekigtkdiek.elnkele 105
                  v+++l++ +aq++++ a+ ++vG++aL++ed l+l++ +++e  f+ Q+ y+++       s ++e++dl ++llr     +p+e l+ki +k++e  + +k+ +
  MMETSP1325-20131115|1349_1 387 SVSNQLYASYAQGKDVLAMKAVVGEEALTQEDMLYLKFTEKFESkFIAQGPYQNR-------S-IFESLDLAWSLLR----AFPKELLKKIPKKTLEVyYKKKMAK 480
                 599****************************************************.......9.999**********....**********999999744444444 PP

>> PF02874.18  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.6   5.5e-16   1.9e-12       1      69 []      21      87 ..      21      87 .. 0.96

  Alignments for each domain:
  == domain 1    score: 47.1 bits;  conditional E-value: 5.5e-16
                ETCC---EEEEE-STTEE--TTTEEEEEEEEES-EEEEEEEEE-SSEEEEEEB---TT-B-.---EEEEE CS
  PF02874.18  1 ivqviGpVvdvefgigrlpgiynalkvelvefgklvlgvalnlgddkVriiamgstdGlkr.GdeVkdTG 69
                i+ v+Gp+v+ve +++  p+  ++++ +l++ g++++g++l++ + +++++++++t+G++  ++ + +TG
  MMETSP1325-20131115|1349_1 21 ISGVNGPLVIVESVKQ--PQFAEIVNLTLKD-GTVRQGQVLEVAGSRAVVQVFEGTSGIDSrNTRCAFTG 87
                789*************..*************.***************************98899999998 PP

>> PF04481.7  Protein of unknown function (DUF561)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.1e-05     0.038     147     227 ..     120     200 ..     116     211 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.1e-05
   PF04481.7 147 dliqteGkitsiskakkvndliekslstlastyeiskkvslPvicasGlsdvtvplalslgasGiGigsavsklndeeemv 227
                 d++   G+  + s  +  + +i++ +s++    +i++  ++P+ +a+Gl +  v   ++  as + +++++ + +d+ +mv
  MMETSP1325-20131115|1349_1 120 DYLDIQGQPINPSCRDYPKAMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEVAAQIARQASLVQLKDTMDSHEDNFAMV 200
                 66677777777777888899********************************************************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.82u 0.35s 00:00:01.17 Elapsed: 00:00:00.57
# Mc/sec: 2028.64
//
Query:       MMETSP1325-20131115|1351_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-30  104.6   0.2    2.1e-30  104.0   0.1    1.3  1  PF00957.16 Synaptobrevin
      4e-24   83.8   0.1    6.3e-24   83.2   0.1    1.3  1  PF13774.1  Regulated-SNARE-like domain
  ------ inclusion threshold ------
      0.046   12.8   0.1       0.13   11.5   0.1    1.7  1  PF00240.18 Ubiquitin family


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.0   0.1   4.6e-34   2.1e-30       2      89 .]     123     210 ..     122     210 .. 0.98

  Alignments for each domain:
  == domain 1    score: 104.0 bits;  conditional E-value: 4.6e-34
  PF00957.16   2 ndklskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklkrkmwwknmklliililvvlililiiiivicg 89 
                 +d++ ++k+++++vk++m eNi+kvlergek+++Lvdkt++L+++a++F+k++++lk++m+wk ++++++ ++vv ++ l+i +++cg
  MMETSP1325-20131115|1351_1 123 SDTIGQVKSQLQDVKGVMVENIEKVLERGEKIELLVDKTDRLNQTAFKFEKTSKQLKNAMFWKTVRMYAMGAAVVGLVGLFIAVSACG 210
                 6899*********************************************************************************996 PP

>> PF13774.1  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.2   0.1   1.4e-27   6.3e-24       2      82 ..      29     108 ..      28     109 .. 0.94

  Alignments for each domain:
  == domain 1    score: 83.2 bits;  conditional E-value: 1.4e-27
   PF13774.1   2 akqilkklppnspqklsyesgnyvfhylvedglvylvvadksyprrlafafLeeikreFlstyggsqiesaspyaf.aeFdt 82 
                 ++ +l+k+pp++  k+sy +++yvfhy+v+ g++yl++a +   +r++fafLe+i+r+F s++g ++i+sa++++f +eF +
  MMETSP1325-20131115|1351_1  29 TRVLLSKIPPQD-GKMSYVYDKYVFHYVVDAGITYLCMANDNRKQRVPFAFLEDIRRRFRSQFG-DAIHSAIAFSFnEEFAP 108
                 6789*****777.7*************************************************7.79*********999976 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   2.8e-05      0.13      14      36 ..     122     144 ..     111     150 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.8e-05
                 TTSBHHHHHHHHHHHHTS-GGGE CS
  PF00240.18  14 psdtvselKekieekegipvdqq 36 
                 +sdt+ ++K ++++ +g+ v+++
  MMETSP1325-20131115|1351_1 122 SSDTIGQVKSQLQDVKGVMVENI 144
                 89***************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       693  (0.0506875); expected 273.4 (0.02)
Passed bias filter:                      569  (0.0416179); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.79
# Mc/sec: 679.47
//
Query:       MMETSP1325-20131115|1355_1  [L=317]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   18.5   0.0     0.0043   17.0   0.0    1.9  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)
  ------ inclusion threshold ------
      0.086   12.6   0.0       0.21   11.3   0.0    1.7  1  PF13180.1  PDZ domain


Domain annotation for each model (and alignments):
>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   6.3e-07    0.0043      43      72 ..      55      84 ..      37      97 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 6.3e-07
                BSTTCEEEEETTEBGTTSHHHHHHHHHHTH CS
  PF00595.19 43 lkeGDkIlsvNgvdvenvshdeavqaikgk 72
                +++GD++++v+gv+ve++s +++ +a++  
  MMETSP1325-20131115|1355_1 55 VEIGDIVVEVDGVSVESMSAAQVFAALTAQ 84
                689********************9999765 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.1e-05      0.21       4      51 ..      27      74 ..      24      97 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 3.1e-05
   PF13180.1  4 Gvsvsqlentrgvlvvs..VkessPaakaglkpGDiilkvdgkkvksltd 51
                Gvs+++ e   g+ v      e++   ++ + +GDi+++vdg+ v+s + 
  MMETSP1325-20131115|1355_1 27 GVSLEDTEV--GAMVSAagLPEQDALPGEWVEIGDIVVEVDGVSVESMSA 74
                788888887..777766644444444455599*************88754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1381.17
//
Query:       MMETSP1325-20131115|1357_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-05   22.4   2.1        1.4    9.1   0.0    3.7  3  PF00560.28 Leucine Rich Repeat
     0.0025   17.6   3.7         22    5.6   0.5    4.4  3  PF13504.1  Leucine rich repeat
     0.0025   17.2   5.2        1.2    8.6   3.3    3.2  1  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.021   14.7   2.3         27    5.1   0.1    3.5  3  PF13516.1  Leucine Rich repeat
       0.06   12.9   1.2       0.43   10.2   0.2    2.5  2  PF13855.1  Leucine rich repeat
      0.079   12.8   0.4       0.43   10.4   0.3    2.1  1  PF05725.7  FNIP Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.1     0.004       9.1       2      20 ..      11      34 ..      10      36 .. 0.76
   2 !    6.0   0.0    0.0063        14       2      21 ..      33      53 ..      32      54 .. 0.84
   3 !    9.1   0.0   0.00061       1.4       2      14 ..      56      68 ..      55      88 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.004
                ESEEEETSS.BCB.C...HHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.s...lppsls 20
                ++ L+L g+ +l+ +   lp s++
  MMETSP1325-20131115|1357_1 11 ITDLNLEGCtKLEgNikdLPRSIK 34
                678*********988666666655 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0063
                ESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsn 21
                ++ L+L ++ +l+ ++ + l+ 
  MMETSP1325-20131115|1357_1 33 IKDLNLYRCeKLEgDIES-LKD 53
                678**********99998.765 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.00061
                ESEEEETSSBCBC CS
  PF00560.28  2 LeeLdLsgNnlts 14
                L++L+Lsg +++ 
  MMETSP1325-20131115|1357_1 56 LQVLNLSGSRFSP 68
                9********9986 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.032        74       3      17 .]      11      30 ..       9      30 .. 0.63
   2 !    5.6   0.5    0.0099        22       3      12 ..      56      65 ..      31      76 .. 0.69
   3 ?    2.5   0.0      0.11   2.5e+02       4      16 ..      74      87 ..      69      88 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.032
   PF13504.1  3 LkeLdLsgn.....rLtsLP 17
                 ++L+L g+     ++++LP
  MMETSP1325-20131115|1357_1 11 ITDLNLEGCtklegNIKDLP 30
                589*****943332245666 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0099
   PF13504.1  3 LkeLdLsgnr 12
                L++L+Lsg r
  MMETSP1325-20131115|1357_1 56 LQVLNLSGSR 65
                5666666665 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.11
   PF13504.1  4 keLdLsgnr.LtsL 16
                ++L L++++ L  L
  MMETSP1325-20131115|1357_1 74 TTLALASCSeLVKL 87
                7899****878665 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   3.3   0.00054       1.2       4      37 ..      12      67 ..       2      86 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00054
   PF12799.2  4 evLdLsnN.....nIkdlppelan...............Lpn..LktLnLsnNpis 37
                + L+L ++     nIkdlp +++                L++  L++LnLs+ ++s
  MMETSP1325-20131115|1357_1 12 TDLNLEGCtklegNIKDLPRSIKDlnlyrceklegdiesLKDcpLQVLNLSGSRFS 67
                66788877777777777776544322222222222222277788999999987775 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.012        27       2      13 ..       9      20 ..       8      29 .. 0.81
   2 ?    4.0   0.0     0.027        61       3      13 ..      32      42 ..      31      53 .. 0.75
   3 ?    3.9   0.0     0.028        63       4      13 ..      56      65 ..      54      82 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.012
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L ++ 
  MMETSP1325-20131115|1357_1  9 QSITDLNLEGCT 20
                689*****9985 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.027
   PF13516.1  3 nLtsLdLsnNq 13
                ++++L+L ++ 
  MMETSP1325-20131115|1357_1 32 SIKDLNLYRCE 42
                799******96 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.028
   PF13516.1  4 LtsLdLsnNq 13
                L++L+Ls+  
  MMETSP1325-20131115|1357_1 56 LQVLNLSGSR 65
                99*****865 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.4   0.00025      0.56       2      59 ..      32      64 ..       9      66 .. 0.56
   2 ?   10.2   0.2   0.00019      0.43       2      36 ..      32      65 ..      31      88 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00025
   PF13855.1  2 nLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                ++k+L+L ++ +l+ +i  +++k+++ L+vL+Ls                        g+
  MMETSP1325-20131115|1357_1 32 SIKDLNLYRCeKLEgDI--ESLKDCP-LQVLNLS------------------------GS 64
                44555555553333222..3666666.6666666........................43 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00019
   PF13855.1  2 nLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnn 36
                ++k+L+L ++ +l+ +i  +++k+++ L+vL+Lsg +
  MMETSP1325-20131115|1357_1 32 SIKDLNLYRCeKLEgDI--ESLKDCP-LQVLNLSGSR 65
                67889999884444444..5999999.9999999765 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.3   0.00019      0.43       7      41 ..       4      38 ..       2      41 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00019
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyF 41
                i  LP++++ L+l    + + +i  LP S+k L++
  MMETSP1325-20131115|1357_1  4 IKDLPQSITDLNLEGCTKLEGNIKDLPRSIKDLNL 38
                568**********888888888999******9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.84
# Mc/sec: 253.90
//
Query:       MMETSP1325-20131115|1358_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-24   84.4   0.8    4.1e-24   84.2   0.5    1.0  1  PF03645.8  Tctex-1 family
  ------ inclusion threshold ------
      0.038   13.5   0.0      0.054   13.0   0.0    1.3  1  PF00383.17 Cytidine and deoxycytidylate deaminase zinc-binding region


Domain annotation for each model (and alignments):
>> PF03645.8  Tctex-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.5     6e-28   4.1e-24       6     102 .]      15     110 .]      10     110 .] 0.97

  Alignments for each domain:
  == domain 1    score: 84.2 bits;  conditional E-value: 6e-28
                 HHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHCC..T-SCCEEEEEEEEE------EEEEEE-S-TTT---EEEEE.ESSSEEEEEEEE-EE- CS
   PF03645.8   6 eiikevleeaLksvkYehekveqwskeiietilkklkelstkkryKyvvnctIvqkggrgmhvasgalWdektDgmvsvky.enkgldvvvtvfaval 102
                 +i++++++++L+++ Ye+++v  ws +i+e  l++l +l  ++++Ky+v+c+Ivqk+g+g+ ++ +a Wd++tD +++v +  n+++ +++t++++a+
  MMETSP1325-20131115|1358_1  15 KIAEHAVTSVLGGEVYEAARVTTWSDKITEIALDELQKL--SDNFKYAVSCIIVQKNGAGIATSGSAHWDTQTDACAQVVWkDNRTIICILTIMGIAI 110
                 799**********************************99..8***************************************99************986 PP

>> PF00383.17  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.8e-06     0.054       2      45 ..      37      80 ..      36     100 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7.8e-06
                CHHHHHHHHHHHHHTT-BTTTSB----EEEETTSSBEE----BC CS
  PF00383.17  2 kedeklleialeaakeaykcsnfkvGavivkkngeiistgynge 45
                ++ +k+ eial++ ++  ++ +  v ++iv+kng  i+t     
  MMETSP1325-20131115|1358_1 37 TWSDKITEIALDELQKLSDNFKYAVSCIIVQKNGAGIATSGSAH 80
                5788999**********9999***********999998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.18s 00:00:00.55 Elapsed: 00:00:00.57
# Mc/sec: 454.48
//
Query:       MMETSP1325-20131115|1356_1  [L=458]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-16   58.7   1.1      1e-15   57.7   0.2    2.0  2  PF01399.22 PCI domain
    0.00013   21.7   4.9       0.39   10.5   0.6    3.8  4  PF13424.1  Tetratricopeptide repeat
    0.00084   19.3   2.8       0.22   11.5   0.4    2.8  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
     0.0018   18.1   0.1     0.0053   16.5   0.1    1.8  1  PF11519.3  Protein of unknown function (DUF3222)
     0.0028   17.2   1.8         11    6.0   0.1    4.7  4  PF13176.1  Tetratricopeptide repeat
     0.0057   16.3   5.5         17    5.5   0.1    5.3  6  PF07719.12 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.091   12.0   0.7       0.19   10.9   0.5    1.5  1  PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
       0.18   11.3   0.8         27    4.4   0.0    3.4  3  PF00515.23 Tetratricopeptide repeat
        2.7    8.7  17.0        4.5    8.0   0.0    5.0  5  PF13428.1  Tetratricopeptide repeat
        6.5    7.3  10.0        4.5    7.8   0.0    4.7  5  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       8.3   1.1e+04      84      97 ..     197     210 ..     181     212 .. 0.74
   2 !   57.7   0.2   7.6e-19     1e-15       3     101 ..     322     420 ..     320     425 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 8.3
                 HHH-------B-S- CS
  PF01399.22  84 lIadgelrakidqp 97 
                 l+++ +++a+i + 
  MMETSP1325-20131115|1356_1 197 LVETHLIEARIQHA 210
                 46667777777775 PP

  == domain 2    score: 57.7 bits;  conditional E-value: 7.6e-19
                 XXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXX------HHHHHHHHHHHHHS-SEE-TTT----SSS-HHHHHHHHHHHHH-------B-S----E CS
  PF01399.22   3 ysdllkalrsgnlsgfseelkdleeelladdglsqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIadgelrakidqpsgiv 101
                 + ++ ka + ++l++f  +  +++  l  d+ +s++l  L++++ e +l ++++++s+++l+r+++l++l+v++vEk l+++I d+++++++dq  g +
  MMETSP1325-20131115|1356_1 322 MAAIAKAAKGRSLEDFDAATSKYQDLLTSDVLVSHHLMILYDNMLESNLLKIIQPFSCVELDRISQLINLPVEKVEKKLSQMILDKKFKGTLDQGRGQL 420
                 566778888889***********888888899999***********************************************************86543 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.44   6.1e+02      48      63 ..      80      95 ..      77     104 .. 0.74
   2 !   10.5   0.6   0.00028      0.39       7      72 ..     160     224 ..     155     227 .. 0.91
   3 !    8.6   0.0    0.0011       1.5      10      64 ..     243     302 ..     241     302 .. 0.84
   4 ?   -2.6   0.0       3.6     5e+03      17      33 ..     333     349 ..     324     364 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.44
   PF13424.1 48 alnnlanlylalgdyd 63
                al++la++++++ +++
  MMETSP1325-20131115|1356_1 80 ALYQLARILVKQRQFE 95
                6777777777776665 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00028
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekA 72 
                 i + la +l++ g+y+ A +l+ k l+ l++l d  + ++ + +  a++++al ++ +A++ l  A
  MMETSP1325-20131115|1356_1 160 IQSKLAALLFKAGEYQPAMDLIVKLLKELKKLDDKQL-LVETHLIEARIQHALRNLPKAKAALTTA 224
                 6789****************************87775.79********************998765 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.0011
   PF13424.1  10 nla.lvlrrlgdydeAlelyekalel.lrelgd...dhpdtaralnnlanlylalgdyde 64 
                 n+  ++++++gdy  + +++ ++ e  +   g+    +p  a++l ++  +++ +g+ de
  MMETSP1325-20131115|1356_1 243 NMSgTLHCEEGDYPTSYSYFLESFESfANINGPgqvGDPKAAVCLKHMMLCKVLAGQADE 302
                 66515566******************776779977769999***************9986 PP

  == domain 4    score: -2.6 bits;  conditional E-value: 3.6
   PF13424.1  17 rlgdydeAlelyekale 33 
                  l+d+d A + y+  l+
  MMETSP1325-20131115|1356_1 333 SLEDFDAATSKYQDLLT 349
                 57888888888877665 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.1    0.0043       5.9      16      52 ..      63     105 ..      35     117 .. 0.68
   2 !   11.5   0.4   0.00016      0.22      27      82 ..     162     222 ..     134     224 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0043
                 CCC-ST-HHHH.......CHHHHHHHHHH---HHHHHHHHHCTS CS
   PF12895.2  16 laespkdpeda.......ylyalAlclylngeykrAyellrkle 52 
                 ++ +++d +da       +ly lA  l ++ ++++ + ll++ +
  MMETSP1325-20131115|1356_1  63 VTAEDRD-DDAavkvkeeALYQLARILVKQRQFEAVMGLLQNAN 105
                 3333323.222578888899999***********9999997644 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00016
                 CHHHHHHHHHH---HHHHHHHHHC.....TSHCHCB..HHHHHHHHHHHHHTT-HHHHCCCHH CS
   PF12895.2  27 ylyalAlclylngeykrAyellrk.....leldsss..lgcryllArcllklgkydeAiavLe 82 
                 + +  A  l+++gey+ A++l+ k     ++ld+++  ++++++ Ar  ++l  + +A a+L 
  MMETSP1325-20131115|1356_1 162 SKL--AALLFKAGEYQPAMDLIVKllkelKKLDDKQllVETHLIEARIQHALRNLPKAKAALT 222
                 445..99***************99*98888888877666666666*******99999999885 PP

>> PF11519.3  Protein of unknown function (DUF3222)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   3.9e-06    0.0053      14      45 ..     117     148 ..     106     153 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 3.9e-06
   PF11519.3  14 aalvktaietvseedGGarnqcklcnasvpWl 45 
                 a +v+t ie+vs  +G    q  lc+  v+W 
  MMETSP1325-20131115|1356_1 117 AKIVRTVIEIVSAAEGALDVQISLCRQVVAWC 148
                 569****************************6 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0078        11       1      23 [.      80     102 ..      80     105 .. 0.88
   2 ?    2.5   0.0     0.099   1.3e+02       4      32 ..     163     192 ..     162     196 .. 0.84
   3 ?    2.5   0.0      0.11   1.4e+02       6      24 ..     246     264 ..     241     272 .. 0.83
   4 ?    0.7   0.0       0.4   5.4e+02      10      31 ..     332     351 ..     324     355 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0078
   PF13176.1   1 allnLarlysrlgdyekAielye 23 
                 al++Lar+ ++++++e    l++
  MMETSP1325-20131115|1356_1  80 ALYQLARILVKQRQFEAVMGLLQ 102
                 799*************9888776 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.099
   PF13176.1   4 nLarlysrlgdyekAielyeraL.altkdp 32 
                  La l ++ g+y+ A +l  ++L +l+k +
  MMETSP1325-20131115|1356_1 163 KLAALLFKAGEYQPAMDLIVKLLkELKKLD 192
                 5999*********99999999998887655 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.11
   PF13176.1   6 arlysrlgdyekAielyer 24 
                 + l+++ gdy +  +++ +
  MMETSP1325-20131115|1356_1 246 GTLHCEEGDYPTSYSYFLE 264
                 568*******999999876 PP

  == domain 4    score: 0.7 bits;  conditional E-value: 0.4
   PF13176.1  10 srlgdyekAielyeraLaltkd 31 
                 ++l d++ A + y+    lt+d
  MMETSP1325-20131115|1356_1 332 RSLEDFDAATSKYQD--LLTSD 351
                 5799*********99..77766 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.2      0.45   6.1e+02      18      33 ..      38      53 ..      37      54 .. 0.90
   2 ?    5.2   0.1     0.016        21       2      18 ..      79      95 ..      78     104 .. 0.90
   3 ?    5.5   0.1     0.012        17       5      29 ..     162     186 ..     159     190 .. 0.87
   4 ?    2.2   0.0      0.14   1.9e+02       3      27 ..     200     224 ..     198     226 .. 0.85
   5 ?   -1.7   0.0       2.4   3.3e+03       8      27 ..     246     265 ..     244     268 .. 0.82
   6 ?   -2.6   0.0       4.6   6.3e+03      14      26 ..     334     346 ..     332     349 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.45
                HHHHHHHHHHHHH-TT CS
  PF07719.12 18 eeAleafekAleldPn 33
                 eAl+a +++ +l P+
  MMETSP1325-20131115|1356_1 38 REALDAADQVAALTPD 53
                69************98 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.016
                HHHHHHHHHHHHTT-HH CS
  PF07719.12  2 ealynlGlayyklgdye 18
                ealy+l++++ k++++e
  MMETSP1325-20131115|1356_1 79 EALYQLARILVKQRQFE 95
                89*************98 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.012
                 HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAle 29 
                   l+ +++k+g+y+ A ++  k l+
  MMETSP1325-20131115|1356_1 162 SKLAALLFKAGEYQPAMDLIVKLLK 186
                 579*************999999887 PP

  == domain 4    score: 2.2 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekA 27 
                  +   +++  +l+++ +A++a+  A
  MMETSP1325-20131115|1356_1 200 THLIEARIQHALRNLPKAKAALTTA 224
                 5667899999**********99887 PP

  == domain 5    score: -1.7 bits;  conditional E-value: 2.4
                 HHHHHHTT-HHHHHHHHHHH CS
  PF07719.12   8 GlayyklgdyeeAleafekA 27 
                 G ++ + gdy     +f ++
  MMETSP1325-20131115|1356_1 246 GTLHCEEGDYPTSYSYFLES 265
                 6678999***9999998876 PP

  == domain 6    score: -2.6 bits;  conditional E-value: 4.6
                 TT-HHHHHHHHHH CS
  PF07719.12  14 lgdyeeAleafek 26 
                 l d++ A   ++ 
  MMETSP1325-20131115|1356_1 334 LEDFDAATSKYQD 346
                 6677878777775 PP

>> PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.5   0.00014      0.19      10      67 ..     160     218 ..     158     232 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00014
   PF10018.4  10 addeLksalkeleehqenqarikeLraeaeslDeqikdilkeLkear..keLkslpdqek 67 
                 ++++L + l ++ e+q   + i +L +e ++lD++   + + L ear  + L++lp ++k
  MMETSP1325-20131115|1356_1 160 IQSKLAALLFKAGEYQPAMDLIVKLLKELKKLDDKQLLVETHLIEARiqHALRNLP-KAK 218
                 688999*************************************9986448999999.333 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.035        47       2      19 ..      79      96 ..      78     104 .. 0.90
   2 ?    4.4   0.0      0.02        27       6      22 ..     163     179 ..     159     186 .. 0.86
   3 ?   -2.7   0.0       3.5   4.7e+03      10      26 ..     207     223 ..     204     224 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.035
                HHHHHHHHHHHHTT-HHH CS
  PF00515.23  2 kalynlGnaylklgkyde 19
                +aly+l+ ++ k+ +++ 
  MMETSP1325-20131115|1356_1 79 EALYQLARILVKQRQFEA 96
                79**************96 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.02
                 HHHHHHHHTT-HHHHHH CS
  PF00515.23   6 nlGnaylklgkydeAle 22 
                  l+++++k g+y+ A +
  MMETSP1325-20131115|1356_1 163 KLAALLFKAGEYQPAMD 179
                 699**********9987 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 3.5
                 HHHHTT-HHHHHHHHHH CS
  PF00515.23  10 aylklgkydeAleyyek 26 
                 +++ l ++ +A ++   
  MMETSP1325-20131115|1356_1 207 IQHALRNLPKAKAALTT 223
                 67789999999988765 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   1.4      0.46   6.3e+02      18      40 ..      38      59 ..      32      73 .. 0.78
   2 ?    8.0   0.0    0.0033       4.5       2      27 ..      79     104 ..      78     120 .. 0.87
   3 ?    6.5   0.0      0.01        14       3      30 ..     160     187 ..     158     200 .. 0.85
   4 ?    0.2   0.1       1.1   1.5e+03       8      27 ..     205     224 ..     198     231 .. 0.78
   5 ?   -1.7   0.1       4.5   6.1e+03      12      28 ..     332     348 ..     319     351 .. 0.60

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.46
   PF13428.1 18 deAiallrralalaPddaealll 40
                 eA++++++++al Pd a a  +
  MMETSP1325-20131115|1356_1 38 REALDAADQVAALTPDAA-ADAY 59
                689999999999999954.3333 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0033
   PF13428.1   2 eallalarallalGdpdeAiallrra 27 
                 eal++lar+l  + ++++ + ll+ a
  MMETSP1325-20131115|1356_1  79 EALYQLARILVKQRQFEAVMGLLQNA 104
                 79*******************99977 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.01
   PF13428.1   3 allalarallalGdpdeAiallrralal 30 
                  + +la++l+ +G+++ A++l  ++l+ 
  MMETSP1325-20131115|1356_1 160 IQSKLAALLFKAGEYQPAMDLIVKLLKE 187
                 5789****************99888875 PP

  == domain 4    score: 0.2 bits;  conditional E-value: 1.1
   PF13428.1   8 arallalGdpdeAiallrra 27 
                 ar++ al ++ +A a+l  a
  MMETSP1325-20131115|1356_1 205 ARIQHALRNLPKAKAALTTA 224
                 88899999999999999887 PP

  == domain 5    score: -1.7 bits;  conditional E-value: 4.5
   PF13428.1  12 lalGdpdeAiallrral 28 
                 + l+d+d+A   ++++l
  MMETSP1325-20131115|1356_1 332 RSLEDFDAATSKYQDLL 348
                 45677888877777765 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1         5   6.8e+03      18      32 ..      39      53 ..      37      64 .. 0.69
   2 ?    7.8   0.0    0.0033       4.5       1      19 [.      79      97 ..      79     112 .. 0.76
   3 ?    0.6   0.0      0.65   8.9e+02       5      28 ..     163     186 ..     161     187 .. 0.83
   4 ?   -0.9   0.0         2   2.7e+03       7      25 ..     205     223 ..     201     226 .. 0.80
   5 ?    0.9   0.2      0.53   7.2e+02       5      28 ..     324     349 ..     320     351 .. 0.71

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 5
                HHHHHHHHHHHH-TT CS
   PF13174.1 18 eAlealerlikeyPd 32
                eAl+a +++ +  Pd
  MMETSP1325-20131115|1356_1 39 EALDAADQVAALTPD 53
                677777777665554 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0033
                HHHHHHHHHHHHHHHHHHH CS
   PF13174.1  1 dAlyklalsyyklgdtdeA 19
                +Aly+la+++ k+ ++++ 
  MMETSP1325-20131115|1356_1 79 EALYQLARILVKQRQFEAV 97
                7***********9555543 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.65
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealerlik 28 
                 kla +++k+g+++ A+++  +l+k
  MMETSP1325-20131115|1356_1 163 KLAALLFKAGEYQPAMDLIVKLLK 186
                 7888999988***99998877776 PP

  == domain 4    score: -0.9 bits;  conditional E-value: 2
                 HHHHHHHHHHHHHHHHHHH CS
   PF13174.1   7 alsyyklgdtdeAlealer 25 
                 a+++ +l +  +A++al  
  MMETSP1325-20131115|1356_1 205 ARIQHALRNLPKAKAALTT 223
                 7888887799999999875 PP

  == domain 5    score: 0.9 bits;  conditional E-value: 0.53
                 HHHHHHH.H.HHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyy.k.lgdtdeAlealerlik 28 
                  +a++ + + l d+d+A   +++l++
  MMETSP1325-20131115|1356_1 324 AIAKAAKgRsLEDFDAATSKYQDLLT 349
                 55555554445899********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.83u 0.40s 00:00:01.23 Elapsed: 00:00:00.85
# Mc/sec: 1291.21
//
Query:       MMETSP1325-20131115|1360_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.61
# Mc/sec: 200.35
//
Query:       MMETSP1325-20131115|1353_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.64
# Mc/sec: 490.50
//
Query:       MMETSP1325-20131115|1361_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.84
# Mc/sec: 262.46
//
Query:       MMETSP1325-20131115|1362_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       941  (0.0688268); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.43s 00:00:01.06 Elapsed: 00:00:00.84
# Mc/sec: 713.20
//
Query:       MMETSP1325-20131115|1365_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.67
# Mc/sec: 554.38
//
Query:       MMETSP1325-20131115|1366_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-13   48.5   0.0    1.1e-12   47.4   0.0    1.5  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.0   8.4e-17   1.1e-12       2      84 ..       6      84 ..       5      87 .. 0.94

  Alignments for each domain:
  == domain 1    score: 47.4 bits;  conditional E-value: 8.4e-17
                EEE----EEE-TT-B--EEEEEEE-EEEEEEE-----EEEEEEE-TTEECSGGGCCSSSB-SSEEEEEEEEEEEEEEHHHHHH CS
  PF00027.24  2 rsfkkgevifkeGdpadslyiilsGkvkvykndedgkesilaelgpGdffGelalltgeprsatvvaltdvevlvipredfre 84
                +s+++++ +fke+d++++++i+++G++  +  d+      l ++ +G+++Ge+all  ++r+atv+ +  ++vl++p+e fr+
  MMETSP1325-20131115|1366_1  6 QSYEADTFLFKENDESNGMFILVQGEAVATAMDGTL----LSTMASGSIIGEIALLARTTRTATVQFTKLSRVLFLPTECFRT 84
                79************************9998888887....579************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.71
# Mc/sec: 830.29
//
Query:       MMETSP1325-20131115|1364_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.41s 00:00:01.02 Elapsed: 00:00:00.75
# Mc/sec: 1028.84
//
Query:       MMETSP1325-20131115|1367_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.84
# Mc/sec: 313.81
//
Query:       MMETSP1325-20131115|1363_1  [L=533]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-27   95.1   0.0      6e-27   94.3   0.0    1.4  1  PF02146.12 Sir2 family
  ------ inclusion threshold ------
      0.077   12.6   0.0        9.4    5.8   0.0    2.5  2  PF00205.17 Thiamine pyrophosphate enzyme, central domain
      0.099   12.2   0.6       0.21   11.2   0.4    1.5  1  PF11921.3  Domain of unknown function (DUF3439)


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.0   1.3e-30     6e-27       1     181 []      43     227 ..      43     227 .. 0.83

  Alignments for each domain:
  == domain 1    score: 94.3 bits;  conditional E-value: 1.3e-30
                 -----TT-------.-----TTTS-HHHHTCHHHHHC-HHHHHH...HHHHCCCCCCT...S---HHHHHHHHHHH--..-EEEEEE--SS-HHHH----..SEEE----TTEEEETTTS-EEEECCGGTCCCHH--........B-ST---BEEESS--B-----.HHHHHHHHHHHH-SEEEE----S-STT CS
  PF02146.12   1 GAGiStesGipdfRskkeGlyaklakeelaspealfsnkllkeepevfynlarellpka.eakpnaaHkflkklekkg..kllrliTQNidnLekkaGsk..kvvelHGslakakcvkCeakesgeelkeeieaekve.......ecekcgkllkpdvvfFGealp.eklkkllekveeadlllviGtSlkVap 181
                 GAG+St++G+pdfRs   G+ + l++        l++ +  +++     n+a+++++ + +a p+++H  l kl++ g   l+ l+ QN d+L++++G+    + elHG+ +  +cv+C +++ ++  +++ +++ ++       +c  cg+ l+ +++ FGe+lp + l+ +++++e+adl l++G+Sl V p
  MMETSP1325-20131115|1363_1  43 GAGVSTAAGVPDFRS---GVNTSLKTGA--GAWVLRDSTPEVRK----ANAAKRITTSTtKAVPTTTHMSLVKLHDGGqgPLKLLVSQNTDGLHRRSGMPpdALAELHGNSNLERCVECGWEVMRDYKTRNHKTAPTAkqhrtgrKCALCGGDLHDTIINFGESLPvRDLTMACDHAERADLCLALGSSLGVSP 227
                 9*************9...9988887765..33334444444444....23444433333389*************96522799****************999*******************988877666666555557889999**********************************************987 PP

>> PF00205.17  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0072        33       1      32 [.      25      56 ..      25      62 .. 0.87
   2 ?    5.8   0.0    0.0021       9.4      74     135 ..     209     270 ..     190     272 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0072
                HHHHHHHHHH-SSEEEEE-CHHCHTTGHHHHH CS
  PF00205.17  1 ideaaellkaakrPvilvGggvrrseakeelr 32
                ++++a+ ++++k  + ++G+gv+++ +  ++r
  MMETSP1325-20131115|1363_1 25 VRRLAKYVRNSKHMIAFTGAGVSTAAGVPDFR 56
                789********************998877665 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0021
                 HHHH-SEEEEES--SSTTTT--.CTC.TTTCC.EEEEEESSCEECTTCE..SEEEESSHHHHHH CS
  PF00205.17  74 aieeaDlvlvlGarlsdvrttg.psa.kfppaakiihvdidpaeigknypvdvavvgdikellk 135
                   e aDl+l+lG+ l        p +   ++ ++++ v+  + +++ +   d+ + ++++++++
  MMETSP1325-20131115|1363_1 209 HAERADLCLALGSSLGVSPANHiPERvGVNQGGRLVIVNLMRTHLDEQA--DLVIHAQCNTVME 270
                 5689********9998855555666655554458999998888888875..6777777777776 PP

>> PF11921.3  Domain of unknown function (DUF3439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   4.6e-05      0.21      35      76 ..      66     107 ..      26     109 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.6e-05
   PF11921.3  35 gsgkpvrsiicpttttttttttttmpttttlptttkmsmvkv 76 
                 g+g  v     p    + ++   t  tt ++pttt+ms+vk+
  MMETSP1325-20131115|1363_1  66 GAGAWVLRDSTPEVRKANAAKRITTSTTKAVPTTTHMSLVKL 107
                 555555555566667777777889999*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.88u 0.36s 00:00:01.24 Elapsed: 00:00:00.80
# Mc/sec: 1596.57
//
Query:       MMETSP1325-20131115|1369_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|1368_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       863  (0.0631217); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.60
# Mc/sec: 950.55
//
Query:       MMETSP1325-20131115|1372_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 713.70
//
Query:       MMETSP1325-20131115|1373_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       485  (0.035474); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 687.65
//
Query:       MMETSP1325-20131115|1371_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 322.77
//
Query:       MMETSP1325-20131115|1370_1  [L=401]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-06   28.3   0.0    3.4e-06   27.1   0.0    1.6  1  PF13519.1 von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   2.5e-10   3.4e-06       3     137 ..      94     262 ..      92     292 .. 0.75

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 2.5e-10
   PF13519.1   3 vlvlDvSgSMnaedv.............sptrldaakaal....kdlldelpgdrvglvafsgsaelvaplt.sdraalkaalnsldprlmpgggtnlaaalalalellakad......grraaivlvtDGedn........ssdie...aasalkragikiyvvgvgsd 137
                 ++v+D+SgSM+  d+             + tr++++++++    + +++     ++ l +  gs   ++  +    ++ +++++++  +++p+g+t+l + + +  e+++++       g   ++vl tDG ++         s++e   a+++l+   i + v  ++++
  MMETSP1325-20131115|1370_1  94 IWVVDNSGSMSKGDGhrikisgrntkilECTRWQELRDTVafhsELAIELVAPTDFRLLNAPGSGAKQFVTCgMGGTTGRNQIKNAM-GTSPTGCTPLTRHIHEIREIVQGKAeslraeGKHIVLVLATDGVPStdagymnsTSKREfqqALQTLQGLPIHLVVRLCTDE 262
                 68********888888888888887777899*********88744444555788899888888764444333135566667776666.45789****************99888999888889999*****887666666553333334477788777777666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.71
# Mc/sec: 1353.44
//
Query:       MMETSP1325-20131115|1376_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.8   0.5       0.24   10.8   0.2    1.5  1  PF10166.4 Uncharacterised conserved protein (DUF2368)


Domain annotation for each model (and alignments):
>> PF10166.4  Uncharacterised conserved protein (DUF2368)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   1.8e-05      0.24      30      56 ..      52      78 ..      45      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.8e-05
   PF10166.4 30 lqnkqrerqmAlqiaesrellkwlasf 56
                ++++ r+rq+A  + +sr +l w+++ 
  MMETSP1325-20131115|1376_1 52 AHYQNRRRQVATWFRRSRKMLSWMSGR 78
                699********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 535.66
//
Query:       MMETSP1325-20131115|1375_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-28   98.5   2.4    3.2e-28   98.1   1.7    1.1  1  PF03151.11 Triose-phosphate Transporter family
    4.7e-08   33.0   3.0    4.7e-08   33.0   2.1    2.6  3  PF00892.15 EamA-like transporter family
     0.0006   18.6   0.6    0.00074   18.3   0.4    1.0  1  PF10060.4  Uncharacterized membrane protein (DUF2298)
  ------ inclusion threshold ------
      0.011   14.4   3.6      0.016   13.9   2.5    1.3  1  PF03611.9  PTS system sugar-specific permease component
       0.33   11.0   7.7      0.046   13.8   0.8    2.3  2  PF13536.1  Multidrug resistance efflux transporter


Domain annotation for each model (and alignments):
>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.1   1.7   1.2e-31   3.2e-28       2     152 ..      32     177 ..      31     178 .. 0.97

  Alignments for each domain:
  == domain 1    score: 98.1 bits;  conditional E-value: 1.2e-31
  PF03151.11   2 filalaasllfalrlvltqlllrkklkkeskldplelliylspvafivllvvlllvegpklgkesssiksldlssivryvlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGvvlYs 152
                 +i+a +a+l+ a++    ++l++ +  k    ++ + ++ +++++fiv+l+++++ eg+k+g++++ +k+     +  + + l+l+g+ ++++n +a+l+++++S++t sva+++krv+viv ++i++g+ +++++ lG+ i + Gv+lYs
  MMETSP1325-20131115|1375_1  32 LIAAAIANLFAAFKGNENKKLMETEGLKDRIGTVGNQFALTTIISFIVSLPFMYFKEGSKWGEFVELFKT-----NDIVKVNLILSGLYFYGYNELATLTIKKTSAVTQSVANTAKRVIVIVGVAIVLGESLDPMKLLGCSIGIGGVFLYS 177
                 6899**************************************************************9999.....446789*********************************************************************8 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1     0.085   2.3e+02     106     125 ..       2      21 ..       1      22 [. 0.88
   2 ?   -0.4   0.0      0.36   9.8e+02      24      43 ..      28      48 ..      21      62 .. 0.64
   3 !   33.0   2.1   1.7e-11   4.7e-08      24     125 ..      70     177 ..      58     178 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.085
  PF00892.15 106 ltlkqllgivlillGvllll 125
                 +++ ++l ++ ++ Gv+l +
  MMETSP1325-20131115|1375_1   2 ISKAKWLCLIPVIGGVCLAS 21 
                 78999***********9986 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.36
  PF00892.15 24 ayrlliagi.llilllfllre 43
                a+  lia++ + ++++f   e
  MMETSP1325-20131115|1375_1 28 AWSALIAAAiANLFAAFKGNE 48
                566666664455555555544 PP

  == domain 3    score: 33.0 bits;  conditional E-value: 1.7e-11
  PF00892.15  24 ayrlliagi.llilllfllrep....ialislkdilal.lllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvllll 125
                 a++ +i++i +l+++ f ++++    ++l++++di  + l+l+ l++  ++ l +  +kktsa++ s+ +++  v++i+  +++lge+l++++llg+ +++ Gv+l +
  MMETSP1325-20131115|1375_1  70 ALTTIISFIvSLPFMYFKEGSKwgefVELFKTNDIVKVnLILSGLYFYGYNELATLTIKKTSAVTQSVANTAKRVIVIVGVAIVLGESLDPMKLLGCSIGIGGVFLYS 177
                 5677778877799999999999****7778888777663667777777777777777************************************************976 PP

>> PF10060.4  Uncharacterized membrane protein (DUF2298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.4   2.7e-07   0.00074     272     404 ..      14     154 ..       2     170 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 2.7e-07
   PF10060.4 272 llglvlglllatns.wdfpvylllallalllasrepatll...rwaarls..aleaviivllslvlylPFlltfssaaaeg..iavlpersiwlalviifGlfllliisylvrrlksvaarwvllllvialvlaa.lvgipl 404
                 + g+ l+++  + + w++++++++a l+ ++   e+++l+   +   r++  ++++++ +++s++++lPF+  f++ ++ g  +++ + ++i++  +i+ Gl +   +   + ++k+  a++++++ + + v++   v+i l
  MMETSP1325-20131115|1375_1  14 IGGVCLASVKELDFaWSALIAAAIANLFAAFKGNENKKLMeteGLKDRIGtvGNQFALTTIISFIVSLPFMY-FKEGSKWGefVELFKTNDIVKVNLILSGLYFYGYNELATLTIKKTSAVTQSVANTAKRVIVIvGVAIVL 154
                 356667777777888**********999999999999888666333333366789***************76.566666666788888999998788888999999998888888888878888876666555433444444 PP

>> PF03611.9  PTS system sugar-specific permease component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   2.5   5.7e-06     0.016     185     264 ..      32     115 ..      16     161 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 5.7e-06
   PF03611.9 185 mlgillsaligklfgkkkkksaedkklpkklgifgdnivagailmlilflilalv....................agkeiveelagganfvvyiltlalk 264
                  ++ +++ l++ + g+ +kk +e++ l++++g  g+++ +++i+ +i+ l  +++                                     + +  +l 
  MMETSP1325-20131115|1375_1  32 LIAAAIANLFAAFKGNENKKLMETEGLKDRIGTVGNQFALTTIISFIVSLPFMYFkegskwgefvelfktndivkV----------------NLILSGLY 115
                 68889999********************************************999555544444444433333330................33333333 PP

>> PF13536.1  Multidrug resistance efflux transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.21   5.7e+02      86     108 ..       2      24 ..       1      29 [. 0.84
   2 ?   13.8   0.8   1.7e-05     0.046       3     106 ..      71     178 ..      69     181 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.21
   PF13536.1  86 lpkrellaslliliGvvlmqvee 108
                 ++k  +l+++ ++ Gv+l  v e
  MMETSP1325-20131115|1375_1   2 ISKAKWLCLIPVIGGVCLASVKE 24 
                 78899999999999999998877 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 1.7e-05
   PF13536.1   3 lrylfmllflllivllrk..rlkellrelkrnpll..wlllagllgfglfyalltlAakhapglvaaital.tpllaallslllfkeklpkrellaslliliGvvlmqv 106
                 l+++ ++++ l   +++   +++e+++++k+n +    l+l+gl +f  +  l tl  k ++++++ ++++   +++++ + ++++e l+   ll + + + Gv+l  v
  MMETSP1325-20131115|1375_1  71 LTTIISFIVSLPFMYFKEgsKWGEFVELFKTNDIVkvNLILSGL-YFYGYNELATLTIKKTSAVTQSVANTaKRVIVIVGVAIVLGESLDPMKLLGCSIGIGGVFLYSV 178
                 66666667766666665523688*********999533666455.5557888888888888887778888877788899999999********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       554  (0.0405208); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.66
# Mc/sec: 675.34
//
Query:       MMETSP1325-20131115|1378_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00015   21.7   0.0     0.0002   21.3   0.0    1.2  1  PF05721.8 Phytanoyl-CoA dioxygenase (PhyH)


Domain annotation for each model (and alignments):
>> PF05721.8  Phytanoyl-CoA dioxygenase (PhyH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   1.5e-08    0.0002     168     204 ..      15      51 ..       2      55 .. 0.82

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 1.5e-08
                 .........-EEE----..............----.. CS
   PF05721.8 168 ddeakkedeeeavpvevkaGdavlfhgrllHgsgaNr 204
                 ++ +++ ++++   + +kaGd+v f+ r+lH+++aN+
  MMETSP1325-20131115|1378_1  15 AQRDEMLAKTKSSYALMKAGDLVMFDMRILHAGHANL 51 
                 456778888999999********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.82
# Mc/sec: 341.92
//
Query:       MMETSP1325-20131115|1379_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-53  179.7   0.0    2.2e-53  179.5   0.0    1.0  1  PF02773.11 S-adenosylmethionine synthetase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02773.11  S-adenosylmethionine synthetase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.5   0.0   1.6e-57   2.2e-53      24     137 ..       2     121 ..       1     122 [. 0.94

  Alignments for each domain:
  == domain 1    score: 179.5 bits;  conditional E-value: 1.6e-57
                 ------------TT-HHHHHHHHHHHHHHHHH-----SEEEEEEE------S-SEEEEE-----S....S-HHHHHHHHHHH-------HHHHHTTTSS-GGGGS-------TT..-GGG CS
  PF02773.11  24 aahgggafsgkdatkvdrsaayaaryvakslvaaglakrclvqlsyaigvaeplsilvetygtsk....kseeelveivrenfdlrpgvivkeldlkkpiykktaayghfgree..fpwe 137
                 +ahgggafsgkd+tkvdrsaayaar+vakslv+agl+ rclvq+syaig+  pls++v+tygt+     k++ e+ eiv++nfdlrpg iv++l+lk+p+ kkta+yghfgr++  f+we
  MMETSP1325-20131115|1379_1   2 GAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVNAGLCARCLVQISYAIGIPYPLSVFVDTYGTGLtsssKTDAEITEIVNQNFDLRPGCIVRDLNLKRPVMKKTASYGHFGRDDpdFSWE 121
                 79************************************************************964222378899***************************************999***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 657.72
//
Query:       MMETSP1325-20131115|1377_1  [L=679]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-52  174.9   0.3    2.2e-51  173.2   0.2    1.9  2  PF00719.14 Inorganic pyrophosphatase


Domain annotation for each model (and alignments):
>> PF00719.14  Inorganic pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.2   0.2   1.6e-55   2.2e-51       1     155 [.      77     255 ..      77     256 .. 0.97
   2 ?   -1.5   0.0     0.097   1.3e+03      61      86 ..     574     599 ..     570     601 .. 0.88

  Alignments for each domain:
  == domain 1    score: 173.2 bits;  conditional E-value: 1.6e-55
                 EEE-SB-TT--EEEEE-S----EEEEE......E-SSSB--SSBB--BTT---............-----BEEEE--SS---TTEEEEEEE---EEEEE---BEEEEEEEETT-CCGT...T--SGGGS-HHHHHHHHHHHHHTTTTS...TT--EEE--B--HHHHHHHHHHHHHHHH CS
  PF00719.14   1 nvviEipkgsraKyeidkeegllpvdr......llyvslkypanYGfipqtle............gDgDplDvlvlgseplapgsvvkvrvlGvlaliDegetDdKilavpvedpeyk...dikdvedlppgllkeieefFetykdle...enkfvkvegwkdaeeAlkvieeaieryk 155
                 n v+Eipk ++aK+e++++e+ +p+ +      l+ ++ ++ +nYG++pqt+e            gD+Dp+Dv+++gs++l++gsv +v++lGvla+iD+ge D+K++a++++dp+++   di+dve  +pg+l+ i+e+F++yk+++    n f ++e++ ++eeA+kvi e++e++k
  MMETSP1325-20131115|1377_1  77 NLVTEIPKMTKAKMEVNTKEENNPIAQdikkgkLRDYHGPIFWNYGCVPQTWEnvkeehpelkcfGDDDPVDVVEIGSAALEMGSVTPVKPLGVLAMIDDGELDWKVVAIAASDPMADelnDIDDVEAKMPGTLSGIREWFRWYKTPDdkpLNSFGFDEKFLNKEEAMKVIAETHESWK 255
                 689*****************************************************************************************************************96577899999999******************9999**************************8 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.097
                 S---TTEEEEEEE---EEEEE---BE CS
  PF00719.14  61 eplapgsvvkvrvlGvlaliDegetD 86 
                 +p+ +g+ v+   +G+  l+De+ +D
  MMETSP1325-20131115|1377_1 574 TPATTGTSVRLTCIGAXLLVDETIED 599
                 578899****************9888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (679 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.02u 0.33s 00:00:01.35 Elapsed: 00:00:00.72
# Mc/sec: 2259.90
//
Query:       MMETSP1325-20131115|1380_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 773.16
//
Query:       MMETSP1325-20131115|1381_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 1687.65
//
Query:       MMETSP1325-20131115|1383_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 417.14
//
Query:       MMETSP1325-20131115|1384_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 663.99
//
Query:       MMETSP1325-20131115|1385_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-30  104.1   1.0    3.5e-30  104.1   0.7    1.7  2  PF02852.17 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain


Domain annotation for each model (and alignments):
>> PF02852.17  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.21   2.9e+03      55      80 ..      33      60 ..      15      68 .. 0.69
   2 !  104.1   0.7   2.6e-34   3.5e-30       1     108 [.      83     194 ..      83     196 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.21
                EETTTTBB-.--EEEETTHHH.HHHHHH CS
  PF02852.17 55 vdaetgkvl.GahivGpgase.liqela 80
                 d  +gkv+ G+ ++G+  ++ +++++a
  MMETSP1325-20131115|1385_1 33 LDGPDGKVVdGLYCIGDANGKyMLAHAA 60
                4555666655888888766665555555 PP

  == domain 2    score: 104.1 bits;  conditional E-value: 2.6e-34
                 BEEEEESSSEEEE----HHHHHHHT......EEEEEEEECCGHHTTTTT.CCEEEEEEEETTTTBB---EEEETTHHHHHHHHHHHHHCT-BHHHHHTSBSSSSSSGGGHHH CS
  PF02852.17   1 vpsvvftdpeiasvGlteeeAkkagge....ikvgklpfkandralayaetkgfvKlvvdaetgkvlGahivGpgaseliqelavaikagltvedlantvfihPtlsealke 108
                 +p+++ft+pe+a+vGl+e++A+++  +    +     +f+an++ala++e +g++K++++ et++++G+hi+G +a++liqe a a+ ag tv ++a++v++hPtlse+l+ 
  MMETSP1325-20131115|1385_1  83 IPAACFTHPEVAFVGLNEKQAQEKAEAegwtLGKSVGHFRANSKALAENEGDGVAKVLFKTETEEIVGVHIIGMHAADLIQECANAMAAGTTVREIAMMVHTHPTLSEVLDS 194
                 799*****************99988557855666777999********************************************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.87
# Mc/sec: 721.66
//
Query:       MMETSP1325-20131115|1388_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.69
# Mc/sec: 166.70
//
Query:       MMETSP1325-20131115|1389_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-18   66.1  18.8    2.4e-18   65.5  13.1    1.3  1  PF05160.8 DSS1/SEM1 family
  ------ inclusion threshold ------
       0.27   10.6   5.1       0.35   10.3   3.5    1.1  1  PF11163.3 Protein of unknown function (DUF2947)


Domain annotation for each model (and alignments):
>> PF05160.8  DSS1/SEM1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5  13.1   3.5e-22   2.4e-18       2      61 ..      28      86 ..      27      88 .. 0.94

  Alignments for each domain:
  == domain 1    score: 65.5 bits;  conditional E-value: 3.5e-22
   PF05160.8  2 kkeekklkllEeDDEFEdFpvedweeeeeekeaskelWeedWDDddveddFskqLkeele 61
                k+e +kl++lEeDDEFE+F +++w++ +e+ e++  +WeedWDD +++ddF++qL++el 
  MMETSP1325-20131115|1389_1 28 KPEPPKLDVLEEDDEFEEFAEKNWDKSAEDGEDA-AQWEEDWDDTEMDDDFTNQLRAELA 86
                567899*********************9999996.9**********************96 PP

>> PF11163.3  Protein of unknown function (DUF2947)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.5   5.1e-05      0.35      46      81 ..      38      73 ..      33      86 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 5.1e-05
   PF11163.3 46 kksseadkfskkdWaakekawleeekWqkaWdsdde 81
                ++ +e ++f++k+W ++++   + ++W++ Wd+ + 
  MMETSP1325-20131115|1389_1 38 EEDDEFEEFAEKNWDKSAEDGEDAAQWEEDWDDTEM 73
                5677889************************97543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 469.87
//
Query:       MMETSP1325-20131115|1386_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-81  269.5   0.8    1.1e-80  269.2   0.5    1.1  1  PF01912.13 eIF-6 family


Domain annotation for each model (and alignments):
>> PF01912.13  eIF-6 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.2   0.5   8.3e-85   1.1e-80       2     199 .]       4     204 ..       3     204 .. 0.99

  Alignments for each domain:
  == domain 1    score: 269.2 bits;  conditional E-value: 8.3e-85
  PF01912.13   2 rlsiegspniGvfakltdkyalvpeglseefvekleeeLk..vevvetsiagsrlvGsllvgNsngllvpstvtdeEleklkeslp.dvevevleekltAlGNvilaNdkvalvhpelskeaeeiiedvLgVevvrgtiagvktVGsaavvtnkGvlvhpeateeeleelsellkveveagTvnrGselvgaglvaNskga 199
                 rl++e+s++iGvfa+lt+ y++ + g se+f +++e+eL+  ++vv+tsiag+r++G+ +vgN++gllvp+t+td+El++l++slp +v v+++ee+l+AlGNv++aNd+valvh++l++e+e+i++dvLgV+v+r+t+ag+ +VGs++ ++n+G++vhp+++ e++eels ll+v++ agT+nrGs+++gag+v+N+++a
  MMETSP1325-20131115|1386_1   4 RLQFESSNEIGVFATLTNGYCITAIGSSENFNSVFEAELAdhIPVVKTSIAGTRIIGRTIVGNRRGLLVPNTCTDQELQHLRNSLPdGVVVQRVEERLSALGNVVAANDHVALVHTDLDRETEDIVADVLGVDVFRQTVAGNALVGSYCRFSNQGGMVHPRTSVEDMEELSALLQVPLVAGTCNRGSDVLGAGMVVNDWSA 204
                 89*************************************99*************************************************************************************************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1179.01
//
Query:       MMETSP1325-20131115|1390_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-10   40.8   0.8    7.1e-05   22.4   0.1    3.7  4  PF00400.27 WD domain, G-beta repeat
     0.0037   17.0   0.1      0.054   13.3   0.0    2.8  3  PF01436.16 NHL repeat
  ------ inclusion threshold ------
       0.05   13.0   1.2        8.9    5.7   0.1    2.4  3  PF12657.2  Transcription factor IIIC subunit delta N-term
      0.079   12.9   0.0        6.6    6.7   0.0    2.9  3  PF04683.8  Proteasome complex subunit Rpn13 ubiquitin receptor


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   4.9e+03      25      36 ..      20      31 ..       3      32 .. 0.73
   2 !   22.4   0.1   2.1e-08   7.1e-05       7      38 ..      47      87 ..      43      88 .. 0.95
   3 !    5.6   0.0    0.0042        14      12      28 ..     105     121 ..      95     143 .. 0.84
   4 !    9.0   0.0   0.00035       1.2      15      38 ..     178     201 ..     172     202 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.4
                EEEEEETTSEEE CS
  PF00400.27 25 llasgSrDgtir 36
                 ++ gS+ g ++
  MMETSP1325-20131115|1390_1 20 KMVVGSESGHVY 31
                567888888776 PP

  == domain 2    score: 22.4 bits;  conditional E-value: 2.1e-08
                EESSSSSEEEEEEESS.........STEEEEEETTSEEEEE CS
  PF00400.27  7 lrgHtspVtcvafspd.........gpllasgSrDgtirlW 38
                +++H + Vt+++f+p          ++ll+++S D + +lW
  MMETSP1325-20131115|1390_1 47 IDAHFGMVTAMSFHPFrktgrasqeSQLLLTASVDWSTKLW 87
                6899************************************* PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.0042
                 SSEEEEEEESSSTEEEE CS
  PF00400.27  12 spVtcvafspdgpllas 28 
                 + V++va+sp+ p l++
  MMETSP1325-20131115|1390_1 105 DYVSDVAWSPTHPALFT 121
                 689*******9665554 PP

  == domain 4    score: 9.0 bits;  conditional E-value: 0.00035
                 EEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  15 tcvafspdgpllasgSrDgtirlW 38 
                 t va+spdg+ +++g   g +r++
  MMETSP1325-20131115|1390_1 178 TKVAWSPDGRAVVCGDVEGVLRVY 201
                 88*************999999987 PP

>> PF01436.16  NHL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   1.6e-05     0.054       7      23 ..      21      38 ..      15      39 .. 0.83
   2 ?   -3.3   0.0       2.9   9.8e+03       8      15 ..     122     129 ..     121     129 .. 0.83
   3 ?   -0.2   0.0       0.3     1e+03       6      18 ..     179     191 ..     178     191 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.6e-05
                EEE-.TT--EEEEEGCCT CS
  PF01436.16  7 vavd.sdGdvyVaDsenh 23
                 +v   +G+vyVaD en+
  MMETSP1325-20131115|1390_1 21 MVVGsESGHVYVADLENR 38
                568889********9996 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 2.9
                 EE-TT--E CS
  PF01436.16   8 avdsdGdv 15 
                 +v+++G++
  MMETSP1325-20131115|1390_1 122 TVNTCGEI 129
                 79999987 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.3
                 EEEE-TT--EEEE CS
  PF01436.16   6 GvavdsdGdvyVa 18 
                  va ++dG+ +V+
  MMETSP1325-20131115|1390_1 179 KVAWSPDGRAVVC 191
                 699*****99996 PP

>> PF12657.2  Transcription factor IIIC subunit delta N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.1    0.0026       8.9      73     101 ..      93     115 ..      34     118 .. 0.68
   2 ?    5.0   0.0    0.0041        14      75     102 ..     157     186 ..     122     189 .. 0.64
   3 ?    5.0   0.1    0.0042        14       8      21 ..     178     191 ..     171     195 .. 0.76

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0026
   PF12657.2  73 akepqsidevsvgeeissshvravaWSPs 101
                  ke  s+       ++s+  v +vaWSP+
  MMETSP1325-20131115|1390_1  93 DKEVLSF------RTNSYDYVSDVAWSPT 115
                 3334444......448888*********7 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0041
   PF12657.2  75 epqsidevsvgeeisss..hvravaWSPsg 102
                 ++ + d+v+v +  +++     +vaWSP g
  MMETSP1325-20131115|1390_1 157 GSGDADGVGVDDSANEPspALTKVAWSPDG 186
                 455556655654444445788999999987 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.0042
   PF12657.2   8 nalsWSeDgqlava 21 
                   ++WS+Dg+ +v+
  MMETSP1325-20131115|1390_1 178 TKVAWSPDGRAVVC 191
                 66899999999987 PP

>> PF04683.8  Proteasome complex subunit Rpn13 ubiquitin receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.38   1.3e+03      57      74 ..      17      38 ..       5      43 .. 0.68
   2 ?    2.3   0.0     0.045   1.6e+02      40      76 ..     105     139 ..      90     147 .. 0.78
   3 ?    6.7   0.0    0.0019       6.6       7      41 ..     186     220 ..     179     225 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.38
   PF04683.8 57 kvksc....ktgrvyvLkfkss 74
                + ++     ++g+vyv + ++ 
  MMETSP1325-20131115|1390_1 17 HADKMvvgsESGHVYVADLENR 38
                4444455558999999877665 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.045
   PF04683.8  40 neveddlilfpgdatfkkvkscktgrvyvLkfkssse 76 
                 + v d +  + + a f++v++c  g + +++ ++s e
  MMETSP1325-20131115|1390_1 105 DYVSDVAWSPTHPALFTTVNTC--GEIAMWNLNHSTE 139
                 556666666788899*******..*****99998876 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.0019
   PF04683.8   7 gkkvtpdprkGliylvksedgllhfqWrdretrne 41 
                 g+ v   +  G++++++ +++  +f W  +e ++e
  MMETSP1325-20131115|1390_1 186 GRAVVCGDVEGVLRVYRVSEEIGKFAWSAEEVAKE 220
                 5677778889*****************99887544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.55
# Mc/sec: 984.68
//
Query:       MMETSP1325-20131115|1391_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0033   17.1   0.0        2.7    8.2   0.0    3.6  3  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0002       2.7       2      18 ..      34      52 ..      33      57 .. 0.86
   2 ?    1.1   0.0     0.041   5.6e+02       2      20 ..      83     102 ..      82     104 .. 0.77
   3 !    3.2   0.0    0.0084   1.1e+02       5      17 ..     109     123 ..     106     129 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0002
                ESEEEETSS.BCB.CHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slpps 18
                +++L+L ++ +l+ +++ps
  MMETSP1325-20131115|1391_1 34 ITVLNLERCsQLEgEISPS 52
                799**********999997 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.041
                 ESEEEETSS.BCB.CHHHHHH CS
  PF00560.28   2 LeeLdLsgN.nlt.slppsls 20 
                 ++++dLs+   l+ +++  ++
  MMETSP1325-20131115|1391_1  83 ITKIDLSSMdTLEgDIQV-FK 102
                 6899**998888877877.65 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.0084
                 EEETSS.BCB.CHHH CS
  PF00560.28   5 LdLsgN.nlt.slpp 17 
                  +Lsg+ +l  ++ p
  MMETSP1325-20131115|1391_1 109 MNLSGCrKLAgDITP 123
                 69****998877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 703.28
//
Query:       MMETSP1325-20131115|1392_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0097   15.5   0.0      0.015   14.9   0.0    1.3  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.1e-06     0.015      30      89 ..      28      87 ..      25      89 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.1e-06
                EEEE-----EEEEEEE-TTEECSGGGCCSSS....B-SSEEEEEEEEEEEEEEHHHHHHHHCC- CS
  PF00027.24 30 vykndedgkesilaelgpGdffGelalltge....prsatvvaltdvevlvipredfrellekn 89
                v ++d+d +    +++ +G+++G +al++ +    p++  vva ++ve+l+++  +++e ++++
  MMETSP1325-20131115|1392_1 28 VERSDQDRQ----DYHVRGSIIGGSALVDIDvirnPYPNQVVARGQVELLEWSIVELKERMKED 87
                555566665....79**************************************99999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.51
# Mc/sec: 1052.52
//
Query:       MMETSP1325-20131115|1393_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 800.60
//
Query:       MMETSP1325-20131115|1382_1  [L=464]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-18   67.8   0.3    2.5e-18   66.6   0.0    1.7  2  PF13519.1  von Willebrand factor type A domain
    2.7e-10   40.1   0.0    4.4e-10   39.4   0.0    1.4  1  PF00092.23 von Willebrand factor type A domain
    1.7e-06   27.0   0.0    3.5e-06   26.1   0.0    1.4  1  PF11265.3  Mediator complex subunit 25 von Willebrand factor type A


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       1.4   6.5e+03      58      86 ..      27      54 ..      15      65 .. 0.65
   2 !   66.6   0.0   5.5e-22   2.5e-18       1     168 [.      75     266 ..      75     267 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 1.4
   PF13519.1 58 sdraalkaalnsldprlmpgggtnlaaal 86
                +d aa ++  ++ d    p++gt++a a+
  MMETSP1325-20131115|1382_1 27 DDVAATETTPTATD-PSTPTEGTPTATAT 54
                44444444444444.46899999998886 PP

  == domain 2    score: 66.6 bits;  conditional E-value: 5.5e-22
   PF13519.1   1 dlvlvlDvSgSMnaedvsptrldaakaalkdlldel.....pgdrvglvafsgsa.......elvapltsdraalkaalnsldprlmpgggtnlaaalalalellakadgrraaivlvtDG......edn...........ssdieaasalkragikiyvvgvgsdega....eallkelaeatggryfdassdaeeleaa 168
                 dlv+v+D ++SM  +      ++aa++ +++++++       ++r+glva+++ +          +++ts+r++ ++ ++ +++++  +g +++aa+l++a+++ ++++g+ ++++l+ D       e +           ++++e a++  ++gi+ y vg+ +  g+    ++++ +la+ t g+++++ s+ae l+++
  MMETSP1325-20131115|1382_1  75 DLVFVVDCTASMGSY------IEAAQNNIRKIMERIvafekTDARFGLVAYRDHPpqdrtfvTRTFDFTSSRKTMQSSIDWMSAQGGGDGPEAVAAGLKAAVDM-DWRKGATKVMILIADApphglgE-SgdgfpngcpdgNDPLELARTMLQRGITCYPVGCEPALGQynfaRDFMCTLARITEGQAVTL-SSAELLADV 266
                 79*************......9*********9998445563566********9754444433557899****************9999999************9.55667**********64444542.14555556655567778999999*************9999889899****************.789998876 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   9.8e-14   4.4e-10       1     114 [.      75     195 ..      75     262 .. 0.78

  Alignments for each domain:
  == domain 1    score: 39.4 bits;  conditional E-value: 9.8e-14
                 EEEEEEE-STTS-HHHHHHHHHHHHHHHH.HH.CCTTTEEEEEEEESSSEE.......EEE-TCCHHCCSSCGGHH..-CCGGSTTS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE--......-- CS
  PF00092.23   1 DivfvlDgSgSigeenfekvkefikklie.kldigpdsvrvglvqyssdak.......tevslndfkskeellsav..sknlkylgggtntgkALkyalenlfssaagsrenapkvvillTD......Gk 114
                 D+vfv+D+  S+g   +e++++ i+k++e +    +++ r+glv y +++          +++++++  + ++s +   +      g  +++++Lk+a+++  +     r++a kv+il+ D      G+
  MMETSP1325-20131115|1382_1  75 DLVFVVDCTASMGS-YIEAAQNNIRKIMErIVAFEKTDARFGLVAYRDHPPqdrtfvtRTFDFTSSR--KTMQSSIdwMSAQGGGDGPEAVAAGLKAAVDM--DW----RKGATKVMILIADapphglGE 195
                 9************9.8999*********955579***************998988866666666653..344444445666666667788***********..55....9************55555533 PP

>> PF11265.3  Mediator complex subunit 25 von Willebrand factor type A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   7.6e-10   3.5e-06      12     154 ..      72     194 ..      64     209 .. 0.82

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 7.6e-10
   PF11265.3  12 evkdvvfviEGtAnlgpyfetlkteYlepiieyfnggelaeeefgaevgatqyslvvfntkasapeslvql.sgptrdvdeflewldsikfvGGGaescallAEGlaeAlqlFddisemrqalgstdvkrhCilicnspPyllP 154
                 e+ d+vfv++ tA +g y+e  ++  + +i+e + + e  + +         ++lv ++ +  +  ++v +   +t++ + + + +d +  +GGG    a +A Gl +A  +          +g t   ++ ili+ +pP+ l 
  MMETSP1325-20131115|1382_1  72 EELDLVFVVDCTASMGSYIEAAQN-NIRKIMERIVAFEKTDAR---------FGLVAYRDHPPQDRTFVTRtFDFTSSRKTMQSSIDWMSAQGGGDGPEA-VAAGLKAAVDM-------DWRKGAT---KVMILIADAPPHGLG 194
                 5679****************9765.59*****99876655555.........5*********99999887615677777778889**********99988.99***999866.......2345666...889999999999775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       585  (0.0427882); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.33s 00:00:01.15 Elapsed: 00:00:00.55
# Mc/sec: 2021.65
//
Query:       MMETSP1325-20131115|1396_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 368.01
//
Query:       MMETSP1325-20131115|1395_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       663  (0.0484933); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 992.78
//
Query:       MMETSP1325-20131115|1398_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00019   20.4   0.0    0.00027   20.0   0.0    1.1  1  PF01946.12 Thi4 family
     0.0015   18.3   0.0     0.0091   15.8   0.0    2.2  2  PF13450.1  NAD(P)-binding Rossmann-like domain
     0.0016   18.4   0.0     0.0028   17.6   0.0    1.4  1  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.067   12.1   0.0        0.1   11.5   0.0    1.2  1  PF01494.14 FAD binding domain


Domain annotation for each model (and alignments):
>> PF01946.12  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   7.8e-08   0.00027      17      58 ..     131     171 ..     120     185 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 7.8e-08
                 EEEEEEE-------HHHHHHHTSTS-EEEEESSS-------- CS
  PF01946.12  17 esDvvivGaGssGltaayylakkdlkvailerklsiGGGawl 58 
                 e+  v+vGa  +Gl+a+yyl k+++  ++le+    G  +wl
  MMETSP1325-20131115|1398_1 131 ETVAVVVGASQAGLSAGYYLQKDNIPNIVLEKATECG-TSWL 171
                 555689*************************986654.5565 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.39   1.3e+03      19      31 ..       9      20 ..       2      38 .. 0.61
   2 !   15.8   0.0   2.7e-06    0.0091       1      38 [.     136     173 ..     136     188 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.39
   PF13450.1 19 gkdvlvlekrdrl 31
                ++dvl++e ++r+
  MMETSP1325-20131115|1398_1  9 KVDVLLFE-GWRV 20
                34777776.2444 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 2.7e-06
   PF13450.1   1 IvGaGlsGlvaAylLakagkdvlvlekrdrlGGraasv 38 
                 +vGa  +Gl+a y+L+k++    vlek+ ++G  + + 
  MMETSP1325-20131115|1398_1 136 VVGASQAGLSAGYYLQKDNIPNIVLEKATECGTSWLDH 173
                 8****************************999776655 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   8.1e-07    0.0028       1      50 [.     135     185 ..     135     214 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 8.1e-07
   PF13738.1   1 lVvGAGaaGlafadnlleegatpliivDrnakpGghwl..kaysfvrlhqps 50 
                 +VvGA  aGl + ++l++ ++ + i++++ ++ G++wl  ++ sf+ ++  s
  MMETSP1325-20131115|1398_1 135 VVVGASQAGLSAGYYLQKDNIPN-IVLEKATECGTSWLdhRWDSFRLVTENS 185
                 69*******************96.9*************76688885554444 PP

>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.9e-05       0.1       3      34 ..     133     164 ..     131     168 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.9e-05
                 CEEE--------HHHHHHHHH.HHEEEEESSS CS
  PF01494.14   3 dVlIVGaGpaGlmlallLseaGvrvvlvekhs 34 
                   ++VGa+ aGl+++  L++  + ++++ek +
  MMETSP1325-20131115|1398_1 133 VAVVVGASQAGLSAGYYLQKDNIPNIVLEKAT 164
                 5579*************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1014.93
//
Query:       MMETSP1325-20131115|1397_1  [L=637]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-13   51.2   0.6    1.8e-06   27.9   0.0    2.5  2  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   1.6e-08   0.00022       5      99 ..       5     104 ..       2     109 .. 0.89
   2 !   27.9   0.0   1.3e-10   1.8e-06       4     101 ..     465     599 ..     462     612 .. 0.91

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.6e-08
                 EEEEEEE.....TSSSCEEEEEEEEETTEEEEESSSST.TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTT..CEEEEEESSHHHHHHHHHHH CS
  PF00169.24   5 Gyllkks.....ellktwkkryfvLtsnyLlyfksskk.ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdv..esyllsaeseeerkrWvqal 99 
                 G l+k +      ++ +w+  ++  t+++  yf  +kk   +++p++ + l+dc + + ++      k+ + +fe++ +d+    ++l+++++ e  +W++ l
  MMETSP1325-20131115|1397_1   5 GVLKKEEggksmLSKTRWTAKWINITEDKFQYFATDKKpAASAKPRKEFLLSDCLLATSTEGG---IKDADLCFELQIQDGsnYAIKLQCKDQAEYDEWCEIL 104
                 5666666888888899********************999999************999999987...9**************888899************9876 PP

  == domain 2    score: 27.9 bits;  conditional E-value: 1.3e-10
                 EEEEEEEETSSSCEEEEEEEEET..TEEEEESSSST.....................................TCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHH CS
  PF00169.24   4 eGyllkksellktwkkryfvLts..nyLlyfksskk.....................................ksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalkn 101
                 +G+l+kks   k+w++ryf+ ++  + Ll+f ++++                                       y ++ + +++++  ++++  + +      + + f++ ++++  + l ae  ++r  Wv+ l  
  MMETSP1325-20131115|1397_1 465 HGWLHKKSAHVKQWRRRYFCVRNtkQFLLEFLYDTQpkyknadgdlyevggpewrgrldltgaivteelnapaGRYVNLSQFMSITSSrQIRDSLTFE---LLATXYGFKVETPSGAAWDLRAELHDDRDMWVKTLTF 599
                 7**********************9999*******99******************************99999998888888888888888999999887...899************9999999999999999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (637 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1963  (0.143578); expected 273.4 (0.02)
Passed bias filter:                      550  (0.0402282); expected 273.4 (0.02)
Passed Vit filter:                       208  (0.0152136); expected 13.7 (0.001)
Passed Fwd filter:                        64  (0.0046811); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.68u 0.48s 00:00:03.16 Elapsed: 00:00:01.40
# Mc/sec: 1090.34
//
Query:       MMETSP1325-20131115|1400_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-11   42.8   0.1    5.4e-11   42.1   0.1    1.3  1  PF00293.23 NUDIX domain
  ------ inclusion threshold ------
      0.054   13.8   3.3       0.77   10.1   0.4    2.5  2  PF00096.21 Zinc finger, C2H2 type
      0.065   12.6   0.1      0.065   12.6   0.1    1.9  2  PF06220.7  U1 zinc finger
       0.19   11.1   0.0       0.19   11.1   0.0    1.9  2  PF02748.10 Aspartate carbamoyltransferase regulatory chain, metal binding domain
       0.29   11.4   8.0        1.8    9.0   0.9    2.9  2  PF13894.1  C2H2-type zinc finger
        1.4    8.4   4.4        2.1    7.8   3.1    1.2  1  PF03145.11 Seven in absentia protein family


Domain annotation for each model (and alignments):
>> PF00293.23  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.1   2.4e-14   5.4e-11       5     122 ..      79     185 ..      76     198 .. 0.77

  Alignments for each domain:
  == domain 1    score: 42.1 bits;  conditional E-value: 2.4e-14
                 EEEEEEETTSEEEEEEECSTTSSTTEEEESBEEETTTTSHHHHHHHHHHHHHHS-EEEEEEEEEEEEEEETTCCCSEEEEEEEEEEEEETGGGCSTTTS.TEEEEEEEEHHHHHHHHHC CS
  PF00293.23   5 vsvillnedgkvLlvqrsrskltapglwefPgGkvdkgEspeeaAvRElkEEtGidlekvrlvgvanydaptddpkreevifflaelpddepeiilntt.Evsevrwvpleelldlala 122
                 ++v+++++dg++L+vq + ++    g w +PgG +d+gEs+ +a+ RE+ EE+Gi+    rl gv++  a ++     + + f ae +d+     l ++ E + ++w +l+e+l   l+
  MMETSP1325-20131115|1400_1  79 AIVVCRRSDGRFLMVQEFAQT----GFW-MPGGQLDAGESLCAAVERECIEEAGIE---IRLTGVIDVIAEGKH---WRRVTFMAEPVDEAMPKSL-PDyESTGACWATLDEVLSGDLK 185
                 6789999999**********8....888.8**************************...466666666666665...4555666666665534444.444**********999876665 PP

>> PF00096.21  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.032        74       1       8 [.       7      14 ..       7      24 .. 0.86
   2 ?   10.1   0.4   0.00034      0.77       2      23 .]      39      61 ..      38      61 .. 0.95

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.032
                EE------ CS
  PF00096.21  1 yqCpdCgk 8 
                y C++Cg+
  MMETSP1325-20131115|1400_1  7 YNCEYCGM 14
                89****96 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00034
                E------EESSHHHHHHHHCC.H CS
  PF00096.21  2 qCpdCgksFsrksnLlrHlrr.H 23
                +Cp+Cg  + r+  + +Hlr+ H
  MMETSP1325-20131115|1400_1 39 ECPICGEGCGRRNPFAVHLRNeH 61
                7*******************988 PP

>> PF06220.7  U1 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   2.9e-05     0.065       2      17 ..       5      20 ..       4      23 .. 0.89
   2 ?   -2.2   0.4       1.2   2.7e+03       7      11 ..      36      40 ..      36      42 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.9e-05
                -S-B-TTT--B-S--S CS
   PF06220.7  2 pkYyCdYCdiyLthDs 17
                p+Y C+YC + L +D 
  MMETSP1325-20131115|1400_1  5 PRYNCEYCGMLLSEDE 20
                9********9999986 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 1.2
                TTT-- CS
   PF06220.7  7 dYCdi 11
                +YC++
  MMETSP1325-20131115|1400_1 36 EYCEC 40
                79988 PP

>> PF02748.10  Aspartate carbamoyltransferase regulatory chain, metal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.1e-05      0.19      35      51 ..       6      22 ..       3      23 .. 0.89
   2 ?   -4.2   1.6       4.7   1.1e+04      39      45 ..      36      42 ..      36      45 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 8.1e-05
                EEEETTT--EECHHCHH CS
  PF02748.10 35 klkCkYCekviseeeil 51
                +++C+YC+  +se+e +
  MMETSP1325-20131115|1400_1  6 RYNCEYCGMLLSEDELW 22
                789***********987 PP

  == domain 2    score: -4.2 bits;  conditional E-value: 4.7
                TTT--EE CS
  PF02748.10 39 kYCekvi 45
                +YCe +i
  MMETSP1325-20131115|1400_1 36 EYCECPI 42
                6999765 PP

>> PF13894.1  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.5     0.012        27       1      19 [.       7      24 ..       7      25 .. 0.86
   2 ?    9.0   0.9    0.0008       1.8       2      24 .]      39      61 ..      38      61 .. 0.94

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.012
   PF13894.1  1 faCplCgktFttreeLrrH 19
                + C++Cg   +  +eL++H
  MMETSP1325-20131115|1400_1  7 YNCEYCGMLLSE-DELWHH 24
                78*****99999.889999 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0008
   PF13894.1  2 aCplCgktFttreeLrrHlakhH 24
                 Cp+Cg  + +r+ +  Hl++ H
  MMETSP1325-20131115|1400_1 39 ECPICGEGCGRRNPFAVHLRNEH 61
                6*******************998 PP

>> PF03145.11  Seven in absentia protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   3.1   0.00091       2.1      29      72 ..      22      62 ..       6      69 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00091
  PF03145.11 29 plqekaeHeesceykpyeCpiggakCkwqGdlkdlleHlvaeHk 72
                 ++ +  H ++++ + +eCpi g+ C   G+ +  + Hl++eH 
  MMETSP1325-20131115|1400_1 22 WHHVPLYHVNAPNLEYCECPICGEGC---GRRNPFAVHLRNEHG 62
                4555667999****************...89999*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.42s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1023.06
//
Query:       MMETSP1325-20131115|1394_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-09   37.6   0.0      2e-09   36.9   0.0    1.3  1  PF09409.5 PUB domain


Domain annotation for each model (and alignments):
>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   1.5e-13     2e-09       4      72 ..      51     119 ..      49     134 .. 0.89

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 1.5e-13
   PF09409.5   4 eefkkaleiLlkllkNIlknPneekyRrirlsNktfkekilsvegavelLellGFkeeee.eeflvlpeq 72 
                 +++   l+++ +++kN++++  eeky +i+ls k+ ++ +   + a+ +L +lGF ++e+ e+f++lpe 
  MMETSP1325-20131115|1394_1  51 DATAASLKLVKTIVKNVVEHAGEEKYTSIKLSGKAGQK-LVAAPAAIAYLTSLGFSTSEDgESFVILPEA 119
                 6677889****************************995.55689****************9999999944 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       893  (0.065316); expected 273.4 (0.02)
Passed bias filter:                      475  (0.0347425); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.43s 00:00:00.96 Elapsed: 00:00:00.49
# Mc/sec: 1193.29
//
Query:       MMETSP1325-20131115|1401_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 606.74
//
Query:       MMETSP1325-20131115|1402_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.9   7.6      0.025   14.1   5.2    1.6  1  PF01148.15 Cytidylyltransferase family


Domain annotation for each model (and alignments):
>> PF01148.15  Cytidylyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   5.2   1.8e-06     0.025     122     190 ..      69     135 ..      13     184 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.8e-06
  PF01148.15 122 ianileglivalllilvvwanDifAylvGkafGktllpkispkKTveGflggfvaavlvgllfslvlsk 190
                  +++ + + + ++ il+v ++D  A+++G ++G  ++p    k T  G+lg+fv+ ++    ++l ++ 
  MMETSP1325-20131115|1402_1  69 PEEPPFAAMLKFAGILCVGIGDAVAAIFGSTYGTARWPG--TKRTFDGSLGFFVSMFMGLNNITLWTGL 135
                 56677888888999*********************9996..578**********999876544443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.47s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 886.65
//
Query:       MMETSP1325-20131115|1403_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.53
# Mc/sec: 171.81
//
Query:       MMETSP1325-20131115|1404_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       902  (0.0659743); expected 273.4 (0.02)
Passed bias filter:                      450  (0.032914); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 533.53
//
Query:       MMETSP1325-20131115|1406_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00035   19.9   0.0    0.00047   19.5   0.0    1.2  1  PF13555.1  P-loop containing region of AAA domain
    0.00039   21.0   0.1     0.0005   20.7   0.0    1.1  1  PF13207.1  AAA domain
  ------ inclusion threshold ------
      0.028   13.2   0.0      0.036   12.9   0.0    1.1  1  PF10236.4  Mitochondrial ribosomal death-associated protein 3
      0.036   12.4   0.0      0.036   12.4   0.0    1.0  1  PF10443.4  RNA12 protein
      0.042   12.8   0.0      0.046   12.7   0.0    1.1  1  PF06414.7  Zeta toxin
      0.047   13.0   0.0      0.047   13.0   0.0    1.1  1  PF00158.21 Sigma-54 interaction domain
      0.049   13.8   0.0      0.057   13.6   0.0    1.2  1  PF13238.1  AAA domain
       0.07   12.3   0.0      0.081   12.1   0.0    1.2  1  PF02223.12 Thymidylate kinase


Domain annotation for each model (and alignments):
>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   2.7e-07   0.00047       6      41 ..       8      40 ..       4      43 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 2.7e-07
   PF13555.1  6 lvNWgtfdg.htveidpkgkntlltGasGsGKSTllD 41
                l+ W+  +g ++ +    +  +++ G+sGsGKST  D
  MMETSP1325-20131115|1406_1  8 LACWYLTHGeKETKP--LQ--VIIEGRSGSGKSTQTD 40
                666999999554444..34..9************877 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   2.9e-07    0.0005       2      32 ..      25      55 ..      25      65 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 2.9e-07
                E--B--TT---HHHHHHHHHHSTEEEEEGGG CS
   PF13207.1  2 iaitGppGsGKsTlakeLaerlglpvlsldd 32
                ++i G +GsGKsT + ++  ++++++l++  
  MMETSP1325-20131115|1406_1 25 VIIEGRSGSGKSTQTDLINGEYNVVMLDCAK 55
                79***********************999866 PP

>> PF10236.4  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.1e-05     0.036      13      38 ..      12      37 ..       3      39 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.1e-05
   PF10236.4 13 klkkaekkkktkrvvltGekgsGKSv 38
                +l   ek++k  +v+++G+ gsGKS+
  MMETSP1325-20131115|1406_1 12 YLTHGEKETKPLQVIIEGRSGSGKST 37
                66777999*****************8 PP

>> PF10443.4  RNA12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.1e-05     0.036      19      58 ..      24      63 ..      12      66 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.1e-05
   PF10443.4 19 fivvkgPrGSGkkeLvldrvlkdrkkvLvidCdelvk..arn 58
                 ++++g  GSGk+       ++ + +v+++dC+++    +++
  MMETSP1325-20131115|1406_1 24 QVIIEGRSGSGKSTQT--DLINGEYNVVMLDCAKILTdiSKT 63
                599**********977..8999************98644555 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.7e-05     0.046      12      48 ..      18      51 ..      11      63 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.7e-05
   PF06414.7 12 eqekpkavllgGqpGAGKtslaellleelaagnivri 48
                ++ kp  v++ G  G+GK++   l+++e+   n+v +
  MMETSP1325-20131115|1406_1 18 KETKPLQVIIEGRSGSGKSTQTDLINGEY---NVVML 51
                5789**********************998...44444 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.8e-05     0.047      20      61 ..      20      56 ..       4      64 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.8e-05
                TS-S-EEEE-------HHHHHHHHHTSTTTTS--EEEETTTS CS
  PF00158.21 20 ktdltvlitGesGtGKellAraiheaskrkkkpfvavncaai 61
                +++l+v+i+G sG+GK++  ++i  +      + v ++ca+i
  MMETSP1325-20131115|1406_1 20 TKPLQVIIEGRSGSGKSTQTDLINGEY-----NVVMLDCAKI 56
                5679*************9998886543.....3666666665 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.3e-05     0.057       1      21 [.      25      45 ..      25      64 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.3e-05
   PF13238.1  1 IlitGtpGvGKtTlakeLaer 21
                ++i G +G+GK+T + ++  +
  MMETSP1325-20131115|1406_1 25 VIIEGRSGSGKSTQTDLINGE 45
                79***********99988544 PP

>> PF02223.12  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.8e-05     0.081       1      20 [.      27      46 ..      27      58 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.8e-05
                EE--TT---HHHHHHHHHHH CS
  PF02223.12  1 iEGlDGaGKttqaellkekl 20
                iEG  G+GK+tq++l+   +
  MMETSP1325-20131115|1406_1 27 IEGRSGSGKSTQTDLINGEY 46
                8*************997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        74  (0.00541252); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 316.32
//
Query:       MMETSP1325-20131115|1408_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.48
# Mc/sec: 1113.31
//
Query:       MMETSP1325-20131115|1409_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.36s 00:00:00.63 Elapsed: 00:00:00.47
# Mc/sec: 193.75
//
Query:       MMETSP1325-20131115|1410_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.6   0.8        3.6    7.8   0.1    2.1  2  PF09099.5 Bacterial Ig-like domain (DUF1927)


Domain annotation for each model (and alignments):
>> PF09099.5  Bacterial Ig-like domain (DUF1927)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0    0.0044        61      48      73 ..       4      29 ..       1      34 [. 0.85
   2 ?    7.8   0.1   0.00026       3.6      44      73 ..      51      80 ..      38      85 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0044
   PF09099.5 48 nevvvdvkaaadakpGartvsvGsak 73
                ++v + ++++ d k   rtv++G  +
  MMETSP1325-20131115|1410_1  4 EHVHIPIAVHVDRKYAERTVRAGRDR 29
                568889999**************876 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.00026
   PF09099.5 44 easpnevvvdvkaaadakpGartvsvGsak 73
                 +  ++v + ++++ d + Gartv +G  +
  MMETSP1325-20131115|1410_1 51 GRGREHVHIPIAVHVDREHGARTVCAGRDR 80
                5667889999***************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|1405_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.54    9.2   8.5        0.3   10.0   4.8    1.4  2  PF01690.12 Potato leaf roll virus readthrough protein


Domain annotation for each model (and alignments):
>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.8   2.2e-05       0.3      11      26 ..       2      17 ..       1      28 [. 0.61
   2 ?   -2.6   0.0      0.15     2e+03     254     254 ..      77      77 ..      42     106 .. 0.52

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 2.2e-05
  PF01690.12 11 PsPtPpppPqPtPePt 26
                P+PtP+p+P+PtP+Pt
  MMETSP1325-20131115|1405_1  2 PAPTPTPAPTPTPAPT 17
                4444444455555555 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.15
  PF01690.12 254 l 254
                 +
  MMETSP1325-20131115|1405_1  77 Q 77 
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.29s 00:00:00.65 Elapsed: 00:00:00.92
# Mc/sec: 281.31
//
Query:       MMETSP1325-20131115|1411_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   13.0   6.9      0.043   12.5   4.8    1.1  1  PF04684.8 BAF1 / ABF1 chromatin reorganising factor


Domain annotation for each model (and alignments):
>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   4.8   3.1e-06     0.043      97     148 ..      98     149 ..      92     157 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.1e-06
   PF04684.8  97 egssssgsnlhahhhhhhqnghtnghglaeddvaedeaqdddedddaavtaa 148
                 e+ + ++  lh h h hh+ gh    +    + ae++a+  +ed+   v a 
  MMETSP1325-20131115|1411_1  98 EHWEAQHAALHDHSHDHHHHGHGSPTAAITAGAAEEQADGSEEDNKVVVRAN 149
                 677789999***************9999999999999877777777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       464  (0.033938); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 757.25
//
Query:       MMETSP1325-20131115|1413_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|1414_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 848.71
//
Query:       MMETSP1325-20131115|1415_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 465.96
//
Query:       MMETSP1325-20131115|1416_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 323.95
//
Query:       MMETSP1325-20131115|1418_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0065   15.9   0.1      0.011   15.2   0.1    1.4  1  PF03108.10 MuDR family transposase
  ------ inclusion threshold ------
       0.57   10.3   3.4          1    9.5   0.2    2.1  2  PF04579.7  Keratin, high-sulphur matrix protein


Domain annotation for each model (and alignments):
>> PF03108.10  MuDR family transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.6e-06     0.011      22      64 ..       3      45 ..       1      48 [. 0.90

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.6e-06
  PF03108.10 22 kyaiknrfefkvkksdktryrakCkkegCpWrvraskdkrskt 64
                 y+ ++++  k+k sd+  ++ +C   gCp ++ a  d  +++
  MMETSP1325-20131115|1418_1  3 AYSEQTQHRTKFKTSDHSNVTGYCYFPGCPHKITAVVDAAKHK 45
                588899*****************************99887776 PP

>> PF04579.7  Keratin, high-sulphur matrix protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2   0.00015         1       9      42 ..       5      38 ..       1      58 [. 0.84
   2 ?    1.3   0.5     0.056   3.8e+02      31      87 ..      54     113 ..      45     121 .. 0.55

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00015
   PF04579.7  9 svptgpatticssdkscrcgvclpstcpheisll 42
                s +t   t + +sd+s   g c    cph+i+ +
  MMETSP1325-20131115|1418_1  5 SEQTQHRTKFKTSDHSNVTGYCYFPGCPHKITAV 38
                667889999*********************9875 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.056
   PF04579.7  31 lpstcpheis.llqptccdnspppcvvpdtsvptcfllnsshptpgls..ginlttyvqp 87 
                  p tc +  s +l p      pp      +  p ++      p p+++  +++l  y+ +
  MMETSP1325-20131115|1418_1  54 HPDTCQKVTSkILVPGKSSYFPPHAYSAPALGPVVLPYLCKTPDPDIKtlTVKLEEYTTQ 113
                 577887655514556555555554444444445443333444556655115666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      460  (0.0336454); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|1419_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 433.38
//
Query:       MMETSP1325-20131115|1420_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   11.8   1.8        0.8    9.7   0.0    2.2  2  PF14211.1 Domain of unknown function (DUF4323)


Domain annotation for each model (and alignments):
>> PF14211.1  Domain of unknown function (DUF4323)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   5.9e-05       0.8     108     121 .]       7      20 ..       2      20 .. 0.88
   2 ?    0.6   0.5     0.039   5.3e+02      15      31 ..      52      69 ..      44      73 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 5.9e-05
   PF14211.1 108 slSvtkeYlalagg 121
                 slSv++eYlala+g
  MMETSP1325-20131115|1420_1   7 SLSVSQEYLALADG 20 
                 8**********986 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.039
   PF14211.1 15 rrgfg.ppegltprStlp 31
                rr+f  p+++++++ ++ 
  MMETSP1325-20131115|1420_1 52 RRAFPdPSTSFHCTTSWS 69
                455541456788888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|1417_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.59
# Mc/sec: 373.67
//
Query:       MMETSP1325-20131115|1422_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   11.5   0.1       0.13   11.5   0.1    2.0  3  PF06810.6 Phage minor structural protein GP20


Domain annotation for each model (and alignments):
>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.11   1.5e+03      96     109 ..      19      32 ..       7      43 .. 0.47
   2 ?   -2.7   0.0      0.23   3.2e+03      51      64 ..      58      71 ..      49      77 .. 0.59
   3 ?   11.5   0.1   9.4e-06      0.13      69     117 ..     138     186 ..     119     193 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.11
   PF06810.6  96 aknakavkalldkd 109
                 a+++ ++k  + + 
  MMETSP1325-20131115|1422_1  19 AEDKLKLKMAIKTS 32 
                 33333333444444 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.23
   PF06810.6 51 kdneeLkkkieklk 64
                ++  e+kkk  klk
  MMETSP1325-20131115|1422_1 58 NNFAEMKKKTMKLK 71
                34445555555555 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 9.4e-06
   PF06810.6  69 kkkeeyeaklkdlklnnaielalkkakaknakavkalldkdklkldddg 117
                  +k+ey ++ +d   ++ i+ a+++++a+  k +k  l k +l l dd+
  MMETSP1325-20131115|1422_1 138 YEKTEYRTDQQDGYPERSIDRAIREENAETVKSLKLALKKTSLVLGDDK 186
                 4599*******************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1024.83
//
Query:       MMETSP1325-20131115|1421_1  [L=603]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   20.7   0.0    0.00054   19.6   0.0    1.6  1  PF00168.25 C2 domain
  ------ inclusion threshold ------
      0.043   13.5   0.4      0.098   12.3   0.3    1.6  1  PF11835.3  Domain of unknown function (DUF3355)


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   7.8e-08   0.00054       2      84 ..     466     556 ..     465     557 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 7.8e-08
                 EEEEEEESS--S-STSSSS-EEEEEEEECTTEEEEEE--BSS-.SSEEEE....EEEEEEESCGGGTE...EEEEEEECHSSSCSEE---E CS
  PF00168.25   2 kvkvieAknLpnkdkngtsdpyvkvslggakskkkrTrviknt.lnPvWn....ekftfevvaeelae...leleVkdedrfgkddflGea 84 
                 +v v++++nL      g+ dp+v+ ++  +  k   T++i     +P W+     +f++ +++++  +   l++eV +  r g  +flG a
  MMETSP1325-20131115|1421_1 466 TVCVHSCQNLVMPHLLGSADPFVVANVFWNGIKVGETETIWYGtAHPAWKnvarNTFKITLSKNDDVKagkLTVEVNHTHRRGAGSFLGVA 556
                 789**************************88899******9776******9*9989999944444444599************999*9987 PP

>> PF11835.3  Domain of unknown function (DUF3355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   1.4e-05     0.098      49      91 ..     306     348 ..     303     396 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.4e-05
   PF11835.3  49 pvslteTkeaeaDmdkveeksektlqdlcakinrmletcvelk 91 
                 ++ l +Tke+e D  +  ++ + t++dl  +  +ml  + e +
  MMETSP1325-20131115|1421_1 306 AICLEQTKEDEQDPSHKLDELNTTMHDLVREQGEMLLRVLEET 348
                 57899**************************777776663332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       995  (0.0727765); expected 273.4 (0.02)
Passed bias filter:                      488  (0.0356934); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.08u 0.37s 00:00:01.45 Elapsed: 00:00:00.63
# Mc/sec: 2293.66
//
Query:       MMETSP1325-20131115|1425_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-25   88.4   0.0    4.2e-25   88.3   0.0    1.0  1  PF03959.8  Serine hydrolase (FSH1)
     0.0058   15.9   0.0      0.028   13.7   0.0    1.8  2  PF02230.11 Phospholipase/Carboxylesterase
  ------ inclusion threshold ------
      0.024   14.3   0.0      0.027   14.1   0.0    1.1  1  PF12695.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF03959.8  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.3   0.0   9.2e-29   4.2e-25      88     208 ..       2     139 ..       1     142 [] 0.94

  Alignments for each domain:
  == domain 1    score: 88.3 bits;  conditional E-value: 9.2e-29
   PF03959.8  88 esldavkdyikengpfdGiiGFSqGaalaallaslleellkea.............khpkl...kfailvsGfkleepkyeeyyeedkiqtpsLhvlGelDtvvdeerseaLaeafkns...skvlkHpggHfvPnkkey 208
                 e++++v+ +i e+gpfd +iGFSqGa+la++l+slle+  +               ++p++   k ++lv G+++++++  e+ + +++qtps+h+ Ge+Dt+ +     +L+++++++   +  + H+ggH +P+ +e 
  MMETSP1325-20131115|1425_1   2 EAVAHVQAHIAESGPFDMLIGFSQGAMLATILTSLLEKPTHMGqppfdsmgdvataEQPPFspwKLVVLVGGMEPRDHRLTELLSGEPLQTPSVHMRGEKDTLFE--PGARLLKRYSDQdgrRLDIVHKGGHAFPRGREA 139
                 7899**********************************987669999999*9999999999999******************999********************..99999***999999778899********98775 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   6.2e-06     0.028     109     127 ..      20      38 ..      18      44 .. 0.78
   2 ?   -0.1   0.0       0.1   4.5e+02     133     170 ..      68     106 ..      55     135 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 6.2e-06
  PF02230.11 109 igGFSqGaalalylaltsp 127
                 ++GFSqGa+la+ l+  ++
  MMETSP1325-20131115|1425_1  20 LIGFSQGAMLATILTSLLE 38 
                 89*********97765544 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.1
  PF02230.11 133 ivafsgalplnqkleqsatkva.kipilqlHgeeDevvp 170
                 +v ++g+ p    l + ++  + ++p +++ ge+D + +
  MMETSP1325-20131115|1425_1  68 VVLVGGMEPRDHRLTELLSGEPlQTPSVHMRGEKDTLFE 106
                 677788888888888888888899999999999998765 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.8e-06     0.027      61     141 ..      19     131 ..       2     132 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.8e-06
   PF12695.2  61 ilvGhSlGGgvalelag........................rd.drvkglvllap.....fpdgedla..kltlpvllihGtrDgvvppeeaeklakalp..gdaelvviegasH 141
                 +l+G+S+G+++a+ l +                         + ++ k +vl+++     +  +e l+   l+ p   + G++D++  p +  +l+k+++     +l +++ ++H
  MMETSP1325-20131115|1425_1  19 MLIGFSQGAMLATILTSllekpthmgqppfdsmgdvataeqPPfSPWKLVVLVGGmeprdHRLTELLSgePLQTPSVHMRGEKDTLFEPGA--RLLKRYSdqDGRRLDIVHKGGH 131
                 79************************************996447999*******94433333344444435666999999*****996655..5555555445567777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 667.22
//
Query:       MMETSP1325-20131115|1423_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.41s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1279.65
//
Query:       MMETSP1325-20131115|1427_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 1703.50
//
Query:       MMETSP1325-20131115|1426_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 926.89
//
Query:       MMETSP1325-20131115|1431_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-07   31.4   0.7    1.8e-07   30.7   0.5    1.4  1  PF13410.1  Glutathione S-transferase, C-terminal domain
      2e-05   24.3   0.1    0.00011   21.9   0.0    2.1  2  PF00043.20 Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF13410.1  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.5   2.7e-11   1.8e-07      10      68 ..      35     105 ..      27     106 .. 0.82

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 2.7e-11
                 GTT-THGGG------SS.....-------HHHHHHHHHHHHHHHHH---.---.......TT----HHHHH CS
   PF13410.1  10 qlraaLdaleahLadgp....fllGdrpslaDialapflvrldaagpgl.dir.......eayPnlrawle 68 
                 ++ + L +l+a La ++     +  +++slaD++++p++ ++ +  p   d++       +++P lraw+ 
  MMETSP1325-20131115|1431_1  35 EIYKQLTWLDATLAEDGrsvdGMVNGELSLADFTWFPTIIFMEYMLPRVfDWPdvfnggpDDFPALRAWFT 105
                 55667999***999777777778888****************9998875455566778889********85 PP

>> PF00043.20  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   1.6e-08   0.00011      28      95 .]      31     111 ..      18     111 .. 0.78
   2 ?   -3.1   0.0         1     7e+03       5      21 ..     116     130 ..     114     143 .. 0.64

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1.6e-08
                 HHHHHHHHHHHHHHHHHH....TSSSSSSSS-BHHHHHHHHHHH.HHHHHTTTTT........HTT-HHHHHHHHHHHHSH CS
  PF00043.20  28 eakrkvlevlealeeels....gkkylvGdkltlADialfpale.wlqrldgnfl........eeefPklkawlkriaarp 95 
                  +  +++++l  l+++l+      +  v+ +l+lAD+ +fp +  + ++l   f+         ++fP+l aw++ + +rp
  MMETSP1325-20131115|1431_1  31 AKIAEIYKQLTWLDATLAedgrSVDGMVNGELSLADFTWFPTIIfMEYMLPRVFDwpdvfnggPDDFPALRAWFTAMKSRP 111
                 556677777778888888776666678999**********9887555555555558888888889**************98 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 1
                 HHHHHHHHHSTTH.HHH CS
  PF00043.20   5 asdalllfyvkkeaaek 21 
                 +++ ++ f+v k+  e+
  MMETSP1325-20131115|1431_1 116 VHADIWGFWVGKD--EE 130
                 6777788887777..33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 753.14
//
Query:       MMETSP1325-20131115|1429_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.089   12.0   0.7        6.2    6.0   0.0    2.0  2  PF00664.18 ABC transporter transmembrane region


Domain annotation for each model (and alignments):
>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0   0.00046       6.2     143     186 ..       4      47 ..       1      49 [. 0.88
   2 ?    4.5   0.4    0.0013        17       2      81 ..      96     178 ..      95     180 .] 0.72

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00046
  PF00664.18 143 ltlvllailpllilvsavlakilkslqkkeqkayakagavaeEa 186
                 ++++ ++++ l++l+++ ++ +lk ++++  +a ak  + ++Ea
  MMETSP1325-20131115|1429_1   4 FLFGAVLTTALCLLLFKLVMPWLKAKEQEDRDALAKYEQDIQEA 47 
                 56667779***************************999999886 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0013
  PF00664.18   2 llaillailagvtalvfplllgrllds...vsdgnde..ersslyslailliavgvlivlllqgsfyllertgqrirkrlfrall 81 
                 l++i+l++l ++  +v  + l+++ ++   v+++ ++   +++  +la+  i +  +++++ ++ fy  + +g  +++++++ ++
  MMETSP1325-20131115|1429_1  96 LIVIVLGVLLPFGGPV--VALAYYYQGmddVTKSFTDlyDMMRVAILALATITLSPFVICSTWSAFYAYQGVGNDASMEFIADVY 178
                 5788888888888888..3334444441225555555877777777777888888999999999999999999999988888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       497  (0.0363517); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 756.74
//
Query:       MMETSP1325-20131115|1430_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 277.47
//
Query:       MMETSP1325-20131115|1433_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|1432_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-28   99.0   0.8    2.1e-28   98.4   0.5    1.3  1  PF00447.12 HSF-type DNA-binding
  ------ inclusion threshold ------
       0.12   11.7   0.2       0.21   10.9   0.1    1.4  1  PF00690.21 Cation transporter/ATPase, N-terminus


Domain annotation for each model (and alignments):
>> PF00447.12  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.4   0.5     3e-32   2.1e-28       1     102 [.      11     111 ..      11     113 .. 0.92

  Alignments for each domain:
  == domain 1    score: 98.4 bits;  conditional E-value: 3e-32
  PF00447.12   1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFhkvkdeekkskkk.ekiweFkhksFkkgkkellekikrkks 102
                 +F+ k y+++++++ ++  swse+g+sf+++d+++f++ +Lp++Fkh+nf SFvRQLn YgF+k+++e++   ++ ++  eFkh++F k++ +ll++ikr  +
  MMETSP1325-20131115|1432_1  11 SFIAKAYSMISQADPST-CSWSEDGTSFIIKDQSKFTE-LLPHFFKHRNFRSFVRQLNFYGFRKIRNESALLPTRpNNWSEFKHDYFVKDRPDLLHNIKRTGT 111
                 59*********988765.8******************9.******************************987776577789*******************865 PP

>> PF00690.21  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   3.1e-05      0.21      15      41 ..     151     177 ..     140     185 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.1e-05
  PF00690.21  15 tdlenGLtsdeaaerlkkyGpNelpep 41 
                  d+ +GL ++ +aer+++ G N+l+ +
  MMETSP1325-20131115|1432_1 151 IDTLTGLVTQLVAERQSEAGYNALNGT 177
                 4899*******************9655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       632  (0.0462259); expected 273.4 (0.02)
Passed bias filter:                      542  (0.0396431); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 1043.41
//
Query:       MMETSP1325-20131115|1435_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 264.43
//
Query:       MMETSP1325-20131115|1434_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0008   18.9   0.0      0.002   17.6   0.0    1.6  1  PF01067.17 Calpain large subunit, domain III


Domain annotation for each model (and alignments):
>> PF01067.17  Calpain large subunit, domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.5e-07     0.002     101     143 ..      33      84 ..      21      87 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.5e-07
  PF01067.17 101 tfinsrevverfrLppgeYvivPstfepn.........eegdFlLrvfsekp 143
                  f  +re + r rL+ g+Yvi+P  f+p+         ++ +F L+vfs+ p
  MMETSP1325-20131115|1434_1  33 PFKPTRETAMRLRLEVGKYVIMPMRFDPQgpmgegetkDDLKFWLSVFSKSP 84 
                 68899*********************98622222222256678888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 806.47
//
Query:       MMETSP1325-20131115|1436_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:01.24
# Mc/sec: 164.27
//
Query:       MMETSP1325-20131115|1441_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   15.0   0.4      0.052   13.1   0.0    2.0  2  PF04723.9 Glycine reductase complex selenoprotein A


Domain annotation for each model (and alignments):
>> PF04723.9  Glycine reductase complex selenoprotein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.8e-06     0.052      21      67 ..      48      95 ..      38      98 .. 0.90
   2 ?   -0.7   0.2     0.067   9.2e+02      72      82 ..     167     177 ..     119     188 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.8e-06
   PF04723.9 21 aieeclksidvevvfss.tecfvctaagamdlenqkkvkeatekigae 67
                a++ c k    ev++ + +e fv +a  +m  + + k+k+ + ++g e
  MMETSP1325-20131115|1441_1 48 ALNRCTKDTFNEVAYGAkSEAFVSAAGSSMGPKLKSKIKQRARELGVE 95
                899************87379**********************999987 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.067
   PF04723.9  72 llgaaeaesag 82 
                     aeae+ag
  MMETSP1325-20131115|1441_1 167 AEVEAEAEAAG 177
                 22345555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       595  (0.0435196); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 924.99
//
Query:       MMETSP1325-20131115|1437_1  [L=665]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.95u 0.36s 00:00:01.31 Elapsed: 00:00:00.60
# Mc/sec: 2655.96
//
Query:       MMETSP1325-20131115|1442_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   13.9   0.3       0.07   12.6   0.2    1.6  1  PF01424.17 R3H domain
      0.083   12.8   0.5       0.16   11.9   0.3    1.5  1  PF11378.3  Protein of unknown function (DUF3181)


Domain annotation for each model (and alignments):
>> PF01424.17  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2     1e-05      0.07       9      35 ..       8      34 ..       6      35 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1e-05
                HTSSEEEE-TT--CHHHHHHHHHHHH- CS
  PF01424.17  9 kstsksvflppmtseeRkliHelaeef 35
                ++ +++++ p +t+e+R ++H++++++
  MMETSP1325-20131115|1442_1  8 DEQRRLLQHPELTQEQRAMVHTTLAKH 34
                5678999****************9876 PP

>> PF11378.3  Protein of unknown function (DUF3181)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   2.3e-05      0.16      27      85 ..      30      89 ..      23      91 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.3e-05
   PF11378.3 27 kLaeklAielsalleqgaeaavrkaleavqVklggGkkelp.LarllpssqlsdLeeiLe 85
                 La++lA    a   + +++a  ++l +  V lg G+k l  +++llp++ ls L +iL 
  MMETSP1325-20131115|1442_1 30 TLAKHLADLQRAVGLDAETNALDSSLLGAVVDLGKGRKLLArVLKLLPQQALSMLPTILR 89
                455555554444444458899999999***********985489************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1220.79
//
Query:       MMETSP1325-20131115|1443_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-12   45.6   0.7    3.2e-12   45.5   0.5    1.1  1  PF00253.16 Ribosomal protein S14p/S29e


Domain annotation for each model (and alignments):
>> PF00253.16  Ribosomal protein S14p/S29e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.5   2.4e-16   3.2e-12       3      55 .]       6      58 .]       4      58 .] 0.94

  Alignments for each domain:
  == domain 1    score: 45.5 bits;  conditional E-value: 2.4e-16
                --S-S-T.T---TT---S------..-----SSS..-HHHHHHHTTT...---B-XX CS
  PF00253.16  3 lsklprkssytrgrnrCvltGrpr..gvirkfgL..cRicFRelAskgllpGfkKas 55
                l + ++k + ++  ++C++tGr+   g+irk+g+   R++FR +A++   +G++K++
  MMETSP1325-20131115|1443_1  6 LANTHPK-TMSKSGRQCRVTGRKGgmGLIRKYGInmKRQQFRLKAKE---MGWQKYN 58
                7889999.****************999*******999**********...*****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|1440_1  [L=460]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   12.2   2.0       0.27   11.5   0.1    2.3  2  PF07536.9 HWE histidine kinase
       0.33   10.2   3.0        4.1    6.6   0.4    2.8  3  PF08427.5 Domain of unknown function (DUF1741)


Domain annotation for each model (and alignments):
>> PF07536.9  HWE histidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1     4e-05      0.27       8      39 ..      19      50 ..      17      60 .. 0.91
   2 ?   -1.8   0.1      0.56   3.8e+03      51      76 ..     347     372 ..     343     377 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 4e-05
   PF07536.9  8 NlLavvqsiarqtlrsaesleefaeklsgRLq 39
                 l+a+v+s+ + t+r+++ ++++ ++l++RL+
  MMETSP1325-20131115|1440_1 19 DLFAIVSSLLELTTRHSHAPAAALHRLAARLT 50
                589****************************7 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.56
   PF07536.9  51 eewagaeLaelleaelapyedeaaer 76 
                 ee ++ae+++l+++  ++++++++e+
  MMETSP1325-20131115|1440_1 347 EEERTAEIDALIKKGQEKLKAKQEEE 372
                 56789999999999999988877665 PP

>> PF08427.5  Domain of unknown function (DUF1741)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1     0.095   6.5e+02      59      99 ..      17      59 ..      15      63 .. 0.54
   2 ?    2.0   0.0     0.015     1e+02     107     138 ..     103     134 ..      97     177 .. 0.85
   3 ?    6.6   0.4    0.0006       4.1     178     212 ..     337     378 ..     290     388 .. 0.77

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.095
   PF08427.5 59 WselwraLlsLvrflttyasdlksk..kqittlltsvvnllal 99
                W++l+    sL+++ t +++   +      ++l+ts+ ++lal
  MMETSP1325-20131115|1440_1 17 WRDLFAIVSSLLELTTRHSHAPAAAlhRLAARLTTSMKTVLAL 59
                8888887778887776555443221112234555555555555 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.015
   PF08427.5 107 fLpspasyddLfYkivesgkvlekfrdvykrk 138
                 fL  ++  d++ + +++++ v++k++++  + 
  MMETSP1325-20131115|1440_1 103 FLDAQERTDQFAFDVLHKHGVFNKIIALCPDV 134
                 899999*******************9988766 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0006
   PF08427.5 178 k.......skkkltseeveevIkqnYetlsiklqegLdqfer 212
                 +       + ++ +++e++  Ik++ e l+ k++e+L ++++
  MMETSP1325-20131115|1440_1 337 EkpkyvstQTEEERTAEIDALIKKGQEKLKAKQEEELVNAAK 378
                 256666668889999*********************987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1094  (0.0800176); expected 273.4 (0.02)
Passed bias filter:                      460  (0.0336454); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.51s 00:00:01.28 Elapsed: 00:00:00.64
# Mc/sec: 1722.38
//
Query:       MMETSP1325-20131115|1444_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-06   28.5   0.9    1.7e-06   27.9   0.7    1.3  1  PF12352.3 Snare region anchored in the vesicle membrane C-terminus


Domain annotation for each model (and alignments):
>> PF12352.3  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.7   1.2e-10   1.7e-06       3      45 ..       9      51 ..       7      57 .. 0.93

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 1.2e-10
   PF12352.3  3 llresdrlknShrivdetisiGaailedLhsQretLkrarskl 45
                  ++++ l++ +r+ de  +iG a++++L+ Qre+L++a++ +
  MMETSP1325-20131115|1444_1  9 MDNSTQLLHDTIRMNDESAAIGDATMNQLVGQREQLEGAHRQV 51
                678999**********************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 614.34
//
Query:       MMETSP1325-20131115|1445_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-15   54.1   0.0    8.8e-14   50.8   0.0    2.0  2  PF00225.18 Kinesin motor domain
      0.004   17.4   1.8     0.0044   17.2   0.3    1.8  2  PF07536.9  HWE histidine kinase
  ------ inclusion threshold ------
      0.043   13.3   5.7       0.26   10.8   0.1    2.2  2  PF10721.4  Protein of unknown function (DUF2514)
       0.11   12.4   0.1       0.24   11.4   0.1    1.5  1  PF11697.3  Protein of unknown function (DUF3293)


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   0.0   2.6e-17   8.8e-14     282     332 ..       5      55 ..       2      58 .. 0.95
   2 ?    1.2   0.1     0.032   1.1e+02     253     287 ..     136     178 ..     105     182 .. 0.62

  Alignments for each domain:
  == domain 1    score: 50.8 bits;  conditional E-value: 2.6e-17
                 TSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHH CS
  PF00225.18 282 skhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaera 332
                 ++h+pYRdS LT+lL+ s+gg++ t++++++  + ++l+e+ ++L+fa+r 
  MMETSP1325-20131115|1445_1   5 ASHIPYRDSTLTMLLRSSFGGRAYTSVVINIACEPEHLDESCCSLEFAKRL 55 
                 68***********************************************96 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.032
                 -H-SHHHHHHHHHHHHHHHHHHHHHHT.........TTSS-CG CS
  PF00225.18 253 errlkEaanINkSLlaLgrvIsaLaen........kkskhvpY 287
                 ++ +  a     SL aL++ I++L++         ++++ + Y
  MMETSP1325-20131115|1445_1 136 RKGRAAAGGAEDSLAALQERITSLSAAhaviesivQRQQTIKY 178
                 4444455555666666666666666654444444433666555 PP

>> PF07536.9  HWE histidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.3   4.4e+03      50      61 ..      69      80 ..      47      94 .. 0.54
   2 !   17.2   0.3   1.3e-06    0.0044      26      73 ..     144     191 ..     125     196 .] 0.88

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1.3
   PF07536.9 50 reewagaeLael 61
                ++++++a+++++
  MMETSP1325-20131115|1445_1 69 EATAEAADVQAV 80
                333333333333 PP

  == domain 2    score: 17.2 bits;  conditional E-value: 1.3e-06
   PF07536.9  26 sleefaeklsgRLqALsrahdlltreewagaeLaelleaelapyedea 73 
                   e+  ++l++R+++Ls+ah ++ +   ++ +++ l+++  ++y +++
  MMETSP1325-20131115|1445_1 144 GAEDSLAALQERITSLSAAHAVIESIVQRQQTIKYLIQQPSKAYVAKE 191
                 5678899********************************999998754 PP

>> PF10721.4  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   7.6e-05      0.26      75     106 ..      68      99 ..      58     116 .. 0.87
   2 ?    4.1   1.5    0.0086        30      68     103 ..     127     164 ..     117     177 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 7.6e-05
   PF10721.4  75 aaaradAadAeaaadrLrqeadklaaaksavt 106
                 ++a a+Aad +a ++rL+ e+ +l+aa ++  
  MMETSP1325-20131115|1445_1  68 TEATAEAADVQAVVGRLKMELSRLEAAGHGGG 99 
                 6899********************99999755 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0086
   PF10721.4  68 kdAqeeaa..aaradAadAeaaadrLrqeadklaaaks 103
                 k+A+ e++  + ra+A +Ae++   L+++++ l aa +
  MMETSP1325-20131115|1445_1 127 KQAKTELTerKGRAAAGGAEDSLAALQERITSLSAAHA 164
                 556666652256889999***************44443 PP

>> PF11697.3  Protein of unknown function (DUF3293)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   6.9e-05      0.24       6      56 ..     105     154 ..     102     164 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.9e-05
   PF11697.3   6 PasralsaeeNaernaaLerelaalglkavegigedpdgsWrEeSflvlgl 56 
                 P+s+  s + N  + + L  ++++ +++ +e +g++ +g  +E+S+++l++
  MMETSP1325-20131115|1445_1 105 PKSEMKSYQANFDKMRLLDSQIKQAKTELTERKGRAAAGG-AEDSLAALQE 154
                 99******************************99999865.9999999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       664  (0.0485664); expected 273.4 (0.02)
Passed bias filter:                      452  (0.0330603); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.50s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 886.20
//
Query:       MMETSP1325-20131115|1448_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-09   36.9   0.1    4.9e-09   36.4   0.0    1.2  1  PF00005.22 ABC transporter
    0.00077   19.3   0.1    0.00087   19.2   0.0    1.0  1  PF13304.1  AAA domain
     0.0073   16.0   0.3      0.055   13.2   0.0    2.0  2  PF13558.1  Putative exonuclease SbcCD, C subunit
  ------ inclusion threshold ------
       0.13   12.4   0.2       0.16   12.1   0.1    1.1  1  PF00550.20 Phosphopantetheine attachment site


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   1.4e-12   4.9e-09      88     117 ..       6      35 ..       3      36 .. 0.95

  Alignments for each domain:
  == domain 1    score: 36.4 bits;  conditional E-value: 1.4e-12
                 -------HHHHHHHHHHTT--SEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  88 stLSgGqkqrvalArallkkpklllLDEPt 117
                 ++LSgG+ +r+ +A +ll++pklllLDEP 
  MMETSP1325-20131115|1448_1   6 RGLSGGELKRLNIAVELLNDPKLLLLDEPL 35 
                 68***************************7 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.5e-07   0.00087     236     283 ..       7      51 ..       4      60 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 2.5e-07
   PF13304.1 236 dlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellk 283
                  lS G+++ l+++  ll+++   ++ll+DEp +gL+ +    +++ lk
  MMETSP1325-20131115|1448_1   7 GLSGGELKRLNIAVELLNDP---KLLLLDEPLTGLDSSRAFSVLSALK 51 
                 58******************...*************988777776664 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.086   2.9e+02      31      39 ..       6      14 ..       2      23 .. 0.76
   2 !   13.2   0.0   1.6e-05     0.055      63      89 ..      25      51 ..      18      52 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.086
   PF13558.1 31 gtlSGGEkq 39
                ++lSGGE +
  MMETSP1325-20131115|1448_1  6 RGLSGGELK 14
                679****74 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 1.6e-05
   PF13558.1 63 sirlvfLDEAFsklDeeniasllellr 89
                 ++l++LDE+ ++lD+ ++ s+l++l+
  MMETSP1325-20131115|1448_1 25 DPKLLLLDEPLTGLDSSRAFSVLSALK 51
                689*******************99997 PP

>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   4.8e-05      0.16       4      44 ..      16      53 ..      16      62 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.8e-05
  PF00550.20  4 leivaevlgldpdeidldtdlfelGlDSllaveliarleee 44
                l+i+ e+l+++ + + ld++l   GlDS  a++++++l ++
  MMETSP1325-20131115|1448_1 16 LNIAVELLNDP-KLLLLDEPL--TGLDSSRAFSVLSALKDR 53
                58999999755.999******..9**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|1447_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00012   21.8   6.0     0.0098   15.7   0.3    2.4  2  PF05725.7 FNIP Repeat
     0.0016   18.2   5.3        4.4    7.5   0.1    4.1  4  PF13516.1 Leucine Rich repeat
  ------ inclusion threshold ------
      0.069   12.7   2.8        6.1    6.5   0.1    2.7  3  PF13013.1 F-box-like domain
      0.074   12.8   0.0         37    4.1   0.0    3.0  3  PF08650.5 DASH complex subunit Dad4
       0.22   11.0   7.3        1.6    8.2   0.4    3.0  4  PF12799.2 Leucine Rich repeats (2 copies)
       0.29   10.3   3.3         11    5.3   0.0    3.7  4  PF12841.2 YvrJ protein family


Domain annotation for each model (and alignments):
>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.3   4.3e-06    0.0098       7      44 .]      52      88 ..      50      88 .. 0.93
   2 !   14.8   0.6   7.9e-06     0.018       7      41 ..      73     107 ..      70     108 .] 0.90

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 4.3e-06
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyFgyf 44
                i  LP++++ L+l  +++ + +i  LP+S++ L++ y+
  MMETSP1325-20131115|1447_1 52 IKDLPQSITDLNL-ERCKLEGNIKDLPQSITDLNLEYC 88
                568**********.********************9885 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 7.9e-06
   PF05725.7   7 igeLPsnleiLilgrdFnqkil..igsLPnSlkeLyF 41 
                 i  LP++++ L+l  ++ qk++  i  LP+S++ L++
  MMETSP1325-20131115|1447_1  73 IKDLPQSITDLNL--EYCQKLKgnIKDLPQSITDLNL 107
                 678**********..999999988999******9986 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.066   1.5e+02       2      12 ..       2      12 ..       1      23 [. 0.82
   2 !    7.4   0.1    0.0022       4.9       2      16 ..      57      71 ..      56      78 .. 0.86
   3 !    7.5   0.1    0.0019       4.4       2      14 ..      78      90 ..      76     102 .. 0.79
   4 ?    0.0   0.0      0.51   1.2e+03       2       9 ..     100     107 ..      98     108 .] 0.85

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.066
   PF13516.1  2 knLtsLdLsnN 12
                +++t+L+L  +
  MMETSP1325-20131115|1447_1  2 QSITDLNLRAC 12
                689*****987 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0022
   PF13516.1  2 knLtsLdLsnNqigd 16
                +++t+L+L ++++ +
  MMETSP1325-20131115|1447_1 57 QSITDLNLERCKLEG 71
                689*********965 PP

  == domain 3    score: 7.5 bits;  conditional E-value: 0.0019
   PF13516.1  2 knLtsLdLsnNqi 14
                +++t+L+L ++q 
  MMETSP1325-20131115|1447_1 78 QSITDLNLEYCQK 90
                689********94 PP

  == domain 4    score: 0.0 bits;  conditional E-value: 0.51
   PF13516.1   2 knLtsLdL 9  
                 +++t+L+L
  MMETSP1325-20131115|1447_1 100 QSITDLNL 107
                 68999*99 PP

>> PF13013.1  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1    0.0029       6.6      21      40 ..      51      70 ..      44      75 .. 0.87
   2 ?    6.5   0.1    0.0027       6.1      22      39 ..      73      90 ..      70      95 .. 0.91
   3 ?   -0.4   0.0      0.37   8.3e+02      21      30 ..      94     103 ..      89     106 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0029
   PF13013.1 21 tllDLPdellelIfnyCkdr 40
                 + DLP+ +  l ++ Ck++
  MMETSP1325-20131115|1447_1 51 NIKDLPQSITDLNLERCKLE 70
                699***************87 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0027
   PF13013.1 22 llDLPdellelIfnyCkd 39
                + DLP+ +  l ++yC++
  MMETSP1325-20131115|1447_1 73 IKDLPQSITDLNLEYCQK 90
                89**************97 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.37
   PF13013.1  21 tllDLPdell 30 
                  + DLP+ + 
  MMETSP1325-20131115|1447_1  94 NIKDLPQSIT 103
                 699***9986 PP

>> PF08650.5  DASH complex subunit Dad4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.016        37      17      33 ..      49      65 ..      43      70 .. 0.85
   2 ?    3.1   0.0     0.035        80      18      33 ..      71      86 ..      67      94 .. 0.85
   3 ?    2.3   0.0      0.06   1.4e+02      18      31 ..      93     106 ..      86     108 .] 0.86

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.016
   PF08650.5 17 isnvekLNesvatlNqe 33
                ++n++ L +s++ lN e
  MMETSP1325-20131115|1447_1 49 LGNIKDLPQSITDLNLE 65
                68************965 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.035
   PF08650.5 18 snvekLNesvatlNqe 33
                +n++ L +s++ lN e
  MMETSP1325-20131115|1447_1 71 GNIKDLPQSITDLNLE 86
                6999*********965 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.06
   PF08650.5  18 snvekLNesvatlN 31 
                 +n++ L +s++ lN
  MMETSP1325-20131115|1447_1  93 GNIKDLPQSITDLN 106
                 799********999 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.5   5.8e+03       5       8 ..       6       9 ..       3      12 .. 0.47
   2 ?    8.2   0.4   0.00072       1.6      17      42 ..      50      76 ..      46      78 .. 0.75
   3 ?    7.8   0.6   0.00098       2.2       3      23 ..      59      88 ..      57      92 .. 0.59
   4 ?    5.5   0.4    0.0053        12       3      23 ..      80     105 ..      78     107 .. 0.79

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 2.5
   PF12799.2 5 vLdL 8
                L+L
  MMETSP1325-20131115|1447_1 6 DLNL 9
               3343 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00072
   PF12799.2 17 ppelanLp.nLktLnLsnNpis.dlsaL 42
                ++ ++ Lp + + LnL++++++ +++ L
  MMETSP1325-20131115|1447_1 50 GN-IKDLPqSITDLNLERCKLEgNIKDL 76
                55.777876799*******997566666 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.00098
   PF12799.2  3 LevLdLsnN....nIkdlppe.....lanL 23
                 + L+L ++    nIkdlp +     l  +
  MMETSP1325-20131115|1447_1 59 ITDLNLERCklegNIKDLPQSitdlnLEYC 88
                567888888666667888877333334444 PP

  == domain 4    score: 5.5 bits;  conditional E-value: 0.0053
   PF12799.2   3 LevLdLsnN.....nIkdlppelanL 23 
                  + L+L ++     nIkdlp ++  L
  MMETSP1325-20131115|1447_1  80 ITDLNLEYCqklkgNIKDLPQSITDL 105
                 67899999977777899999998766 PP

>> PF12841.2  YvrJ protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.1   4.8e+03      29      35 ..       2       8 ..       2       8 .. 0.78
   2 ?    1.3   0.0      0.08   1.8e+02      24      34 ..      52      62 ..      48      65 .. 0.67
   3 ?    5.3   0.0    0.0048        11      19      35 ..      68      84 ..      67      86 .. 0.88
   4 ?    1.9   0.0     0.052   1.2e+02      23      34 ..      94     105 ..      89     108 .] 0.60

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 2.1
   PF12841.2 29 ksIneLs 35
                +sI++L+
  MMETSP1325-20131115|1447_1  2 QSITDLN 8 
                6899985 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.08
   PF12841.2 24 ldaLtksIneL 34
                +++L +sI++L
  MMETSP1325-20131115|1447_1 52 IKDLPQSITDL 62
                56666777777 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.0048
   PF12841.2 19 RiEkkldaLtksIneLs 35
                ++E+ +++L +sI++L+
  MMETSP1325-20131115|1447_1 68 KLEGNIKDLPQSITDLN 84
                689999********996 PP

  == domain 4    score: 1.9 bits;  conditional E-value: 0.052
   PF12841.2  23 kldaLtksIneL 34 
                  +++L +sI++L
  MMETSP1325-20131115|1447_1  94 NIKDLPQSITDL 105
                 355566666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 562.62
//
Query:       MMETSP1325-20131115|1450_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.2    8.7   5.4        1.8    8.1   3.7    1.3  1  PF12938.2 M domain of GW182


Domain annotation for each model (and alignments):
>> PF12938.2  M domain of GW182
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   3.7   0.00014       1.8      20     102 ..     102     189 ..      87     210 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00014
   PF12938.2  20 gsavnslpfsqnnlnnnlgggvagggggaaggnpnla....slsslss.kslgkylsgqqapplgsagasgvgggngvggggvpasae 102
                 g+  + l    n+l +  ggg++ggg+ +   n+n++    ++ s+ss +s  ++ s+  +  +++a+ + ++ g g+ ggg     +
  MMETSP1325-20131115|1450_1 102 GTTIDDLQARLNGLDASGGGGGGGGGQRPSSRNSNMSwrnrGVRSPSSvPSAREWRSSIRPAAVSNASTGISSLGMGSVGGGTVRLDG 189
                 4445555555566677778888888888888899999999988887653789999997777666666655555444444444333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 1129.71
//
Query:       MMETSP1325-20131115|1451_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 864.40
//
Query:       MMETSP1325-20131115|1453_1  [L=307]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-08   31.3   0.0     0.0047   16.3   0.0    2.5  2  PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
     0.0004   20.0   1.1        9.8    6.1   0.1    4.3  4  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   6.9e-07    0.0047      17      38 ..       1      22 [.       1      22 [. 0.94
   2 !   12.4   0.0   1.2e-05     0.079      14      44 ..      40      69 ..      25      71 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 6.9e-07
   PF12894.2 17 iswcPtmDLiAlatekgelaly 38
                + w P+ DL+Al+t+kg l+++
  MMETSP1325-20131115|1453_1  1 MRWAPSGDLLALGTAKGALLIF 22
                78*****************996 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 1.2e-05
   PF12894.2 14 vkfiswcPtmDLiAlatekgelalyRlnwqr 44
                + + +w+ ++D +A+a+e+ ++ ++R +++ 
  MMETSP1325-20131115|1453_1 40 IVCGDWN-ENDTLAYASEDRQITICRADGET 69
                6677787.5899***************9976 PP

>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.045   3.1e+02      17      33 ..       1      17 [.       1      23 [. 0.77
   2 ?    2.9   0.0     0.014        97       7      36 ..      33      61 ..      27      62 .. 0.83
   3 !    4.7   0.1     0.004        27      10      38 ..     167     194 ..     162     195 .. 0.68
   4 !    6.1   0.1    0.0014       9.8      13      35 ..     213     235 ..     204     237 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.045
                EEEESSSTEEEEEETTS CS
  PF00400.27 17 vafspdgpllasgSrDg 33
                ++++p+g lla g + g
  MMETSP1325-20131115|1453_1  1 MRWAPSGDLLALGTAKG 17
                68********9877665 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.014
                EESSSSSEEEEEEESSSTEEEEEETTSEEE CS
  PF00400.27  7 lrgHtspVtcvafspdgpllasgSrDgtir 36
                   H+  + c +++ +   la +S+D+ i 
  MMETSP1325-20131115|1453_1 33 SGRHKRRIVCGDWNEN-DTLAYASEDRQIT 61
                56699999999*****.*********9985 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.004
                 SSSSEEEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  10 HtspVtcvafspdgpllasgSrDgtirlW 38 
                 H +  +++a +p  +++a++++ ++++l 
  MMETSP1325-20131115|1453_1 167 HDDQLRDIAHCPVTNRVACCGD-KCVKLI 194
                 5555555555555999999999.999985 PP

  == domain 4    score: 6.1 bits;  conditional E-value: 0.0014
                 SEEEEEEESSSTEEEEEETTSEE CS
  PF00400.27  13 pVtcvafspdgpllasgSrDgti 35 
                 +  ++a+++dg++l  +Sr g++
  MMETSP1325-20131115|1453_1 213 TLDSLAWADDGKILSVSSRSGCL 235
                 5569**************98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.73
# Mc/sec: 1007.78
//
Query:       MMETSP1325-20131115|1452_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-10   39.2   0.5    0.00018   21.1   0.0    2.2  2  PF13563.1 2'-5' RNA ligase superfamily


Domain annotation for each model (and alignments):
>> PF13563.1  2'-5' RNA ligase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.3e-08   0.00018       1      61 [.      20      80 ..      20     104 .. 0.81
   2 !   16.7   0.0     3e-07    0.0041      81     151 ..     182     254 ..     142     256 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 1.3e-08
   PF13563.1  1 pppslaapiealrrslydkayprwppHiTLlypfvepedl....adlaellsrlaaetepfevrl 61
                pp++++++++ +r + +dka++ wp+Hi Ll p +++ d     ++   l++ l+++ ++f++++
  MMETSP1325-20131115|1452_1 20 PPEHVRERLDVVR-EQHDKAFATWPAHIRLLWPAPAQLDAscvrDE---LAAALLQRATAFDLTI 80
                899**********.************************99544333...3333444555566665 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 3e-07
   PF13563.1  81 seslsaLraallealpeagdkedst....geftPHlTiaqsedstsakelleklagalpplefevdevallrrdg 151
                 + +++++ + l++alp+ ++    +    +    HlT++q ++++ a+el + l  +++++++ev +v ll+ +g
  MMETSP1325-20131115|1452_1 182 TRPFPQVTQVLYSALPGSEATPPTApdtpDSDPLHLTLGQCASRATAAELERGL--RQEEWSWEVGSVVLLSQKG 254
                 6778888888888888885444333556567777********************..9999***********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.55
# Mc/sec: 1272.25
//
Query:       MMETSP1325-20131115|1455_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 743.87
//
Query:       MMETSP1325-20131115|1456_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 150.88
//
Query:       MMETSP1325-20131115|1457_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-35  121.7   1.3    2.2e-35  121.2   0.9    1.2  1  PF00638.13 RanBP1 domain
     0.0057   16.2   0.5      0.019   14.5   0.4    1.7  1  PF00568.18 WH1 domain
  ------ inclusion threshold ------
      0.041   13.3   0.1      0.061   12.7   0.0    1.3  1  PF07933.9  Protein of unknown function (DUF1681)
       0.21   11.0   2.8       0.43   10.0   1.9    1.4  1  PF11679.3  Protein of unknown function (DUF3275)
        1.1    7.5   4.3        1.8    6.7   3.0    1.3  1  PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus


Domain annotation for each model (and alignments):
>> PF00638.13  RanBP1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.9   8.2e-39   2.2e-35       1     121 [.      73     200 ..      73     201 .. 0.95

  Alignments for each domain:
  == domain 1    score: 121.2 bits;  conditional E-value: 8.2e-39
                 ----S-TTEEEEEEE--EEEEEETTT.......TEEEE-----EEEEEETTT--EEEEEEETTTTEEEEEEE--TTS-EEE----TSEEEEEEEE-TTSS-EEEEEEEE-SSHHHHHHHHHHHHHHHH CS
  PF00638.13   1 evksgEEdEevlfkqraKLfrfdaek.......kewkeRGvGdiKilkkkddekvRllmRrdqvlkvcaNhvitkemklkplagsdrslvwtaadaadeeakleqlaikfkkkeeadefkkkfeeakk 121
                 ev sgEE+E+++fk r KL+r+ +         k+w eRGvG++Kilk+++++  RllmR+++++k+++N+ + +++ ++ + gsdr++vw + d+++++ + e + +kf+++e a++fk++f++++k
  MMETSP1325-20131115|1457_1  73 EVTSGEEEEDIVFKLRGKLYRYGETMldkgsgkKQWIERGVGEMKILKHRETQTERLLMRQEKTMKLIVNALVDPRIVMTKNVGSDRAWVWSCFDYSEGTLEEEVFSVKFGNAEDAAKFKETFDQSQK 200
                 799*******************875444455669********************************************************************************************98 PP

>> PF00568.18  WH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4     7e-06     0.019      20     109 ..      99     197 ..      94     199 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 7e-06
                 EE..ETTTEEEE.EE---EEEEEETTTTEEEEEEE-S----EEEEEE--SS---B-----EEEE.....----S.....-EEEEESSHHHHHHHHHHHHH CS
  PF00568.18  20 ladpakketWikakhagavslvkdstqnsyflrlvklqdakvvieqeiyknleynqarqkfhtf.....edera.....vvGLnFaseeeakkFakkvqe 109
                 l +++ k++Wi+ + +g++++ k+   ++ +l +++ +  k++++  + + ++ +++      +       +++     v+  +F++ e+a+kF + +++
  MMETSP1325-20131115|1457_1  99 LDKGSGKKQWIE-RGVGEMKILKHRETQTERLLMRQEKTMKLIVNALVDPRIVMTKNVGSDRAWvwscfDYSEGtleeeVFSVKFGNAEDAAKFKETFDQ 197
                 556788999***.***********************99**********99999998766544331111144444556669***************99986 PP

>> PF07933.9  Protein of unknown function (DUF1681)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.2e-05     0.061      40     136 ..     114     213 ..      89     232 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.2e-05
   PF07933.9  40 grlrvvekkekvkvdivledkstgelfaaapyteeeavekvlDSsRyFalrvede.ng..rkailGlGFedRseaFdfnvalqdarkvekkekeaskeke 136
                 g+++++++ e+ + ++++ +++t++l+++a ++ + +++k + S R ++    d  +g  ++ +  + F + ++a  f+ +  + +k ++  +e +  + 
  MMETSP1325-20131115|1457_1 114 GEMKILKHRETQTERLLMRQEKTMKLIVNALVDPRIVMTKNVGSDRAWVWSCFDYsEGtlEEEVFSVKFGNAEDAAKFKETFDQSQKNMAALQEGADAAP 213
                 89***********************************************988776455558999*****************9999998665555555444 PP

>> PF11679.3  Protein of unknown function (DUF3275)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.9   0.00016      0.43      94     173 ..      11      92 ..       5     104 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00016
   PF11679.3  94 epqevDPldespelaaqaavasaplpsPspaskkeaserlskdlrerlapvgkeasaPakeaaeassaededa..elfgelW 173
                  ++ vD + e+p    +a+++s+  ++P+pa+++ a+   + +++e+ ++ + ++    +e+  +s +e+ed   +l g+l+
  MMETSP1325-20131115|1457_1  11 MSAAVDKATEEPAADPAAPASSTSEAAPAPAAEESAPAPSGDEPQEEESTYQCDPVVQLEEVEVTSGEEEEDIvfKLRGKLY 92 
                 4567899999999777777777788899999999999999999999999888888777777755555555554445555555 PP

>> PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   3.0   0.00065       1.8     257     327 ..       4      73 ..       2      90 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00065
   PF07462.6 257 llPkgvtaeakvtavvtppsadaaaapdsvrpagasgaasgstsaptaesvlGegaaatelqvvvklqdyd 327
                 ++  +   +a+v  ++  p ad+aa p s ++++a++ a++++ ++++++ + e +++ + + vv+l++ +
  MMETSP1325-20131115|1457_1   4 FVQAVNKMSAAVDKATEEPAADPAA-PASSTSEAAPAPAAEESAPAPSGDEPQEEESTYQCDPVVQLEEVE 73 
                 5555666778888888999999988.889999999999999999999999998888888888898887754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       580  (0.0424225); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.56
# Mc/sec: 996.38
//
Query:       MMETSP1325-20131115|1454_1  [L=456]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-19   69.2   4.4    4.7e-19   67.9   3.0    1.8  1  PF04212.13 MIT (microtubule interacting and transport) domain
    5.5e-14   52.3   0.0      1e-13   51.5   0.0    1.4  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    1.1e-06   27.7   0.0    2.6e-06   26.5   0.0    1.6  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    0.00014   21.5   0.0    0.00042   19.9   0.0    1.9  1  PF07728.9  AAA domain (dynein-related subfamily)
    0.00018   20.6   0.2     0.0086   15.1   0.1    2.4  2  PF01078.16 Magnesium chelatase, subunit ChlI
    0.00019   22.0   0.0    0.00064   20.3   0.0    2.0  2  PF13207.1  AAA domain
     0.0034   17.1   0.0      0.013   15.2   0.0    1.8  2  PF07724.9  AAA domain (Cdc48 subfamily)
     0.0057   16.8   0.2       0.05   13.7   0.0    2.4  2  PF13238.1  AAA domain
     0.0057   16.6   0.1       0.58   10.1   0.1    3.0  3  PF13401.1  AAA domain
     0.0077   16.2   0.0      0.019   15.0   0.0    1.7  1  PF00910.17 RNA helicase
     0.0082   16.4   1.6      0.025   14.8   0.1    2.6  2  PF13191.1  AAA ATPase domain
  ------ inclusion threshold ------
       0.01   15.3   0.0      0.042   13.3   0.0    2.1  2  PF01443.13 Viral (Superfamily 1) RNA helicase
      0.039   13.7   0.1       0.11   12.2   0.1    1.8  1  PF13671.1  AAA domain
      0.058   12.7   0.0        2.6    7.3   0.0    2.5  1  PF00158.21 Sigma-54 interaction domain
      0.069   11.8   0.0       0.12   11.0   0.0    1.3  1  PF01057.12 Parvovirus non-structural protein NS1
      0.098   12.2   0.0       0.24   10.9   0.0    1.8  1  PF03266.10 NTPase
        0.1   12.3   0.0        1.2    8.7   0.0    2.3  2  PF04851.10 Type III restriction enzyme, res subunit
       0.12   11.8   0.4       0.71    9.3   0.1    2.1  2  PF05729.7  NACHT domain
       0.39    9.8   2.8        4.6    6.2   0.1    3.2  4  PF12846.2  AAA-like domain
        6.9    6.4   8.0       0.53    9.9   1.8    2.0  1  PF06696.6  Streptococcal surface antigen repeat


Domain annotation for each model (and alignments):
>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   3.0   6.8e-22   4.7e-19       2      69 .]      15      82 ..      14      82 .. 0.98

  Alignments for each domain:
  == domain 1    score: 67.9 bits;  conditional E-value: 6.8e-22
                HHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHCTTHHCHHHHHHHHHHHHHHHHHHHHHH CS
  PF04212.13  2 lskAlelikkAveaDeagkyeeAlelYkeAlelLlqalkyepnperrealrqkieeylkrAeelkell 69
                l++A+e +k+A+ aD+ag+y++Al+ Y++A++ +l+++ky++n++ +e++ +++e+yl+rAe++k+ l
  MMETSP1325-20131115|1454_1 15 LDNAVERVKQAIAADNAGDYQAALTQYEDAIQRFLHVIKYTKNEKEKEVIIKRVETYLARAEQIKASL 82
                79***************************************************************976 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.0   1.5e-16     1e-13       1      95 [.     159     253 ..     159     285 .. 0.87

  Alignments for each domain:
  == domain 1    score: 51.5 bits;  conditional E-value: 1.5e-16
                 EEEE-------HHHHHHHHHHC.......THEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHH CS
  PF00004.24   1 vllyGppGtGKTllakavakel.......gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldg 95 
                 +l+ GppG+GKT++a+ ++k l       + +++e++  +l+  ++g+++ ++r +++ ak      +lf+DE ++l ++    e++++ +++++L+++++ 
  MMETSP1325-20131115|1454_1 159 LLFKGPPGCGKTSMARLLCKALknlgvlsKGHLVEVQRGDLVAGHIGQTAINTRRIIDMAK----GGVLFVDECYRLSGQG---ERDFGPEAIDELMSAMEL 253
                 6899*****************85444444599**************************985....37**********9999...99************9985 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   3.7e-09   2.6e-06      50     117 ..     156     235 ..     123     253 .. 0.82

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 3.7e-09
   PF05496.7  50 ldhvllyGpPGlGkttlakiiakelgvelkvtsgPvle.kagdlaa.......l....ltnleekdvlfideihrlsrav 117
                   h+l+ GpPG Gkt++a++++k l+     + g ++e + gdl+a       +    + +++++ vlf+de +rls + 
  MMETSP1325-20131115|1454_1 156 FPHLLFKGPPGCGKTSMARLLCKALKNLGVLSKGHLVEvQRGDLVAghigqtaIntrrIIDMAKGGVLFVDECYRLSGQG 235
                 56***********************9888888888887456899754433332333334578999***********9765 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   6.2e-07   0.00042       1      29 [.     158     187 ..     158     234 .. 0.67

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 6.2e-07
                 EEEEE------HHHHHHHGGGGB.S--EEE CS
   PF07728.9   1 dvlLvGppGtgKselaerlaeal.nrevey 29 
                 ++l +GppG+gK+++a++l++al n  v+ 
  MMETSP1325-20131115|1454_1 158 HLLFKGPPGCGKTSMARLLCKALkNLGVLS 187
                 799********************6655554 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   1.3e-05    0.0086      24      65 ..     158     202 ..     154     216 .. 0.72
   2 ?    3.5   0.0     0.044        30      91     117 ..     204     230 ..     199     239 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.3e-05
  PF01078.16  24 nlllvGppGsGKtmlakrlpsllppl...seeealevakiasvag 65 
                 +ll+ GppG+GKt +a+ l + l +l   s+   +ev++   vag
  MMETSP1325-20131115|1454_1 158 HLLFKGPPGCGKTSMARLLCKALKNLgvlSKGHLVEVQRGDLVAG 202
                 89***************9998876641115666666666666665 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.044
  PF01078.16  91 vGggskpkpGeislahnGvLfLDElpe 117
                 +G  +  +   i +a+ GvLf+DE+  
  MMETSP1325-20131115|1454_1 204 IGQTAINTRRIIDMAKGGVLFVDECYR 230
                 55555666667899**********976 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         7   4.8e+03      73      73 ..      63      63 ..      12     130 .. 0.59
   2 !   20.3   0.0   9.4e-07   0.00064       5      32 ..     162     190 ..     159     300 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 7
                H CS
   PF13207.1 73 w 73
                +
  MMETSP1325-20131115|1454_1 63 V 63
                1 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 9.4e-07
                 B--TT---HHHHHHHHHHS.TEEEEEGGG CS
   PF13207.1   5 tGppGsGKsTlakeLaerl.glpvlsldd 32 
                  GppG+GK++ a++L+++l +l vls + 
  MMETSP1325-20131115|1454_1 162 KGPPGCGKTSMARLLCKALkNLGVLSKGH 190
                 5****************997666777666 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       3.2   2.2e+03      17      53 ..      39      82 ..      27      87 .. 0.71
   2 !   15.2   0.0     2e-05     0.013       6      80 ..     159     231 ..     156     249 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 3.2
                HHHHHHHHHHTT-..........--EEEEGGG---.----THHH CS
   PF07724.9 17 telakalaellfv......kkekkliradaselle.eeevehlv 53
                t  ++a++++l+v      +kek++i++   ++l  +e+++ ++
  MMETSP1325-20131115|1454_1 39 TQYEDAIQRFLHVikytknEKEKEVIIKRVETYLArAEQIKASL 82
                55666777777777777778888888888888887556666555 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 2e-05
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT---EEEETGGG- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKi 80 
                 +l+ gp g+Gkt +a+ l + l+  +   l      e++ ++ v+  + +  ++   ++  ++gG++++DE  + 
  MMETSP1325-20131115|1454_1 159 LLFKGPPGCGKTSMARLLCKALK--NLGVLSKGHLVEVQRGDLVAGHIGQTAINTRRIIDMAKGGVLFVDECYRL 231
                 689*******************7..566777777888888999****************************7555 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       1.4   9.6e+02      67      92 ..      42      79 ..      11      90 .. 0.62
   2 !   13.7   0.0   7.3e-05      0.05       4      23 ..     162     188 ..     160     229 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 1.4
   PF13238.1 67 es............elaegenviidghlaeleledlkd 92
                e+            ++++++ vii  + ++l + ++++
  MMETSP1325-20131115|1454_1 42 EDaiqrflhvikytKNEKEKEVIIKRVETYLARAEQIK 79
                22444444455567777888888888887777776665 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 7.3e-05
   PF13238.1   4 tGtpGvGKtTlakeLaerl.......g 23 
                  G+pG+GKt+ a++L + l       +
  MMETSP1325-20131115|1454_1 162 KGPPGCGKTSMARLLCKALknlgvlsK 188
                 6**************999866655541 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.1   0.00085      0.58       6      28 ..     158     180 ..     156     195 .. 0.87
   2 ?    3.1   0.0      0.12        84      75     115 ..     199     254 ..     178     266 .. 0.65
   3 ?   -1.9   0.0       4.5   3.1e+03      53      76 ..     341     364 ..     300     381 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00085
   PF13401.1   6 ilvvtGesGvGKTtllrrlarql 28 
                 +l++ G++G+GKT  +r l + l
  MMETSP1325-20131115|1454_1 158 HLLFKGPPGCGKTSMARLLCKAL 180
                 67889************998876 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.12
   PF13401.1  75 ll.ealqealrrrrt.......rlliiDEaqrLs........eealeelrsllddet 115
                 l+  ++ +++ ++r+       ++l +DE  rLs         ea++el s ++   
  MMETSP1325-20131115|1454_1 199 LVaGHIGQTAINTRRiidmakgGVLFVDECYRLSgqgerdfgPEAIDELMSAME-LG 254
                 5545555555555556777778***********544556677888888866666.44 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 4.5
   PF13401.1  53 ellqkllsalglpakgrltteell 76 
                 +++  +l++ ++ +++rlt ++ l
  MMETSP1325-20131115|1454_1 341 GICDHILRNAKRHLDARLTIDDGL 364
                 355555666555555544444443 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.7e-05     0.019       2      24 ..     160     182 ..     159     208 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.7e-05
  PF00910.17   2 wlyGpsgeGKStlakeLakallk 24 
                 ++ Gp+g+GK+++a+ L+kal +
  MMETSP1325-20131115|1454_1 160 LFKGPPGCGKTSMARLLCKALKN 182
                 689****************9974 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       1.8   1.2e+03      66      97 ..      39      70 ..      15     147 .. 0.57
   2 !   14.8   0.1   3.7e-05     0.025      25      60 ..     158     192 ..     139     335 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 1.8
   PF13191.1 66 lpysaiiqalrellrqlltelaaelggwreal 97
                ++y+++iq++ ++++    e ++e+   r + 
  MMETSP1325-20131115|1454_1 39 TQYEDAIQRFLHVIKYTKNEKEKEVIIKRVET 70
                46666666666666655555555544433333 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 3.7e-05
   PF13191.1  25 lllvtGpsGiGKSsLlrelakpillerlrfaagkfd 60 
                  ll+ Gp+G+GK+s++r l+k++   ++    g+ +
  MMETSP1325-20131115|1454_1 158 HLLFKGPPGCGKTSMARLLCKALKNLGV-LSKGHLV 192
                 79999*************8887544333.3334444 PP

>> PF01443.13  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   6.2e-05     0.042       3      71 ..     161     232 ..     159     256 .. 0.66
   2 ?   -1.5   0.0         2   1.4e+03      26      67 ..     323     363 ..     267     373 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 6.2e-05
  PF01443.13   3 vhGvpGcGKStlirkllrt....ltvnrptaelrtegkpklpnlsvrtvdsflmalvks.kgkililDEylllh 71 
                  +G pGcGK+++ r l++      + ++   + + +g   +++  +  +++      +  kg +l++DE+++l 
  MMETSP1325-20131115|1454_1 161 FKGPPGCGKTSMARLLCKAlknlGVLSKGHLVEVQRGDLVAGHIGQTAINTRRII--DMaKGGVLFVDECYRLS 232
                 6799*******99999988777633344444555555433333333333322222..2246889******9985 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 2
  PF01443.13  26 rptaelrtegkpklpnlsvrtvdsflmalvkskgkililDEy 67 
                 +  +e +t ++ + ++ ++  +d++l +++++   +l +D+ 
  MMETSP1325-20131115|1454_1 323 CALIEQHTTWL-QREKMNGGICDHILRNAKRHLDARLTIDDG 363
                 33344455554.556666666777777777666666666665 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   0.00017      0.11       3      24 ..     160     181 ..     159     209 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00017
   PF13671.1   3 llvGlpGsGKstlaerllkklg 24 
                 l+ G+pG+GK+  a+ l+k+l+
  MMETSP1325-20131115|1454_1 160 LFKGPPGCGKTSMARLLCKALK 181
                 789***************9998 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0038       2.6      25     106 ..     159     232 ..     142     239 .. 0.58

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0038
                 EEEE-------HHHHHHHHHTSTT....TTS--EEEETTTS-HHHHHHHH------------S-----TTTG----EEEET----- CS
  PF00158.21  25 vlitGesGtGKellAraiheaskr....kkkpfvavncaaipeeLleseLFGhekGaFtGAekekkGlfekadgGtLfLDeigelp 106
                 +l +G  G+GK+ +Ar++ +a k+    +k+++v+v+ +++            ++G    +  + +  ++ a+gG+Lf+De  +l+
  MMETSP1325-20131115|1454_1 159 LLFKGPPGCGKTSMARLLCKALKNlgvlSKGHLVEVQRGDL------------VAGHIGQTAINTRRIIDMAKGGVLFVDECYRLS 232
                 56777777777777777766544211112223333322222............222222222233346788888888888887776 PP

>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00018      0.12     117     144 ..     159     186 ..     151     189 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00018
  PF01057.12 117 vwfyGpantGktnlaeaIakavplygcv 144
                 ++f Gp+ +Gkt +a+ ++ka+++ g++
  MMETSP1325-20131115|1454_1 159 LLFKGPPGCGKTSMARLLCKALKNLGVL 186
                 5788*********************998 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00036      0.24       3      38 ..     160     195 ..     158     228 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00036
                 EEE-------HHHHHHHHHH-...---EE--EEE-- CS
  PF03266.10   3 fiTGepgvGKtTlvkkvlellksegvkvgGfyteev 38 
                 +  G+pg GKt + + ++++lk+ gv  +G ++e  
  MMETSP1325-20131115|1454_1 160 LFKGPPGCGKTSMARLLCKALKNLGVLSKGHLVEVQ 195
                 567***********************9999887654 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0018       1.2       7      50 ..     129     181 ..     123     204 .. 0.73
   2 ?    0.7   0.0      0.53   3.6e+02     148     163 ..     221     236 ..     188     255 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0018
  PF04851.10   7 yQeeaienllesieke.........dekkrglivmaTGtGKTlvaasliarla 50 
                  Q  a e +l+  ++           +++++l++ + G+GKT +a  l+++l 
  MMETSP1325-20131115|1454_1 129 AQVLAFEHTLALDKRRrqlgadtgdIRFPHLLFKGPPGCGKTSMARLLCKALK 181
                 5666666666555555777777777789***************9986555554 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.53
  PF04851.10 148 dviiiDEaHrlsakkk 163
                  v+++DE+ rls + +
  MMETSP1325-20131115|1454_1 221 GVLFVDECYRLSGQGE 236
                 499*******999876 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1     0.001      0.71       4      26 ..     160     182 ..     158     192 .. 0.86
   2 ?   -0.1   0.0      0.78   5.4e+02      61      95 ..     331     369 ..     312     384 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.001
   PF05729.7   4 ilqGeaGsGKTtLlqklasawak 26 
                 + +G++G+GKT +++ l++a++ 
  MMETSP1325-20131115|1454_1 160 LFKGPPGCGKTSMARLLCKALKN 182
                 679**************999986 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.78
   PF05729.7  61 qlpepaapvse..vwivllelperlL...lil.DglDelvs 95 
                  +++ ++         ++l++++r L   l++ Dgl+e+ +
  MMETSP1325-20131115|1454_1 331 TWLQREKM--NggICDHILRNAKRHLdarLTIdDGLEEMMT 369
                 33444444..3448899999999999999777358888876 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.33   2.2e+02     135     179 ..      39      86 ..      10     121 .. 0.58
   2 ?    6.2   0.1    0.0068       4.6       2      25 ..     157     180 ..     156     195 .. 0.78
   3 ?   -0.1   0.0      0.58     4e+02     246     270 ..     221     248 ..     193     251 .. 0.73
   4 ?   -1.3   0.0       1.3   8.7e+02      86     147 ..     316     379 ..     269     406 .. 0.64

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.33
   PF12846.2 135 qayPt.lgdllealreee.eelaeealarde.rreaaeelalalerll 179
                  +y   +  +l++++  + e+++e  ++r e ++++ae+++++l++  
  MMETSP1325-20131115|1454_1  39 TQYEDaIQRFLHVIKYTKnEKEKEVIIKRVEtYLARAEQIKASLATTA 86 
                 222222555666666666344444444444489999999999998774 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0068
   PF12846.2   2 pntlilGppGsGKSvllkklvlql 25 
                 p+ l+ GppG+GK++ ++ l+ +l
  MMETSP1325-20131115|1454_1 157 PHLLFKGPPGCGKTSMARLLCKAL 180
                 789999********9999996544 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.58
   PF12846.2 246 kllviDEahrllgs...pegadfldela 270
                  +l++DE+ rl g    ++g +++del+
  MMETSP1325-20131115|1454_1 221 GVLFVDECYRLSGQgerDFGPEAIDELM 248
                 689********98866666667777766 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 1.3
   PF12846.2  86 sreldlllalle..tdselrnrpledeeeaalsralrelyeeegiatlaqrqayPt.lgdlleal 147
                 +++l+l+ al+e  t++ +r+   ++  + +l++a r+l ++  i+ +  ++ +   + dl++a+
  MMETSP1325-20131115|1454_1 316 ETRLQLVCALIEqhTTWLQREKMNGGICDHILRNAKRHLDARLTID-DGLEEMMTYsIQDLIKAC 379
                 4555555556666555555555555566666666666666666665.222222222244444444 PP

>> PF06696.6  Streptococcal surface antigen repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.8   0.00078      0.53       2      11 ..      33      42 ..      33      43 .. 0.96

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00078
   PF06696.6  2 dYeAkLaqYq 11
                dY+A+L+qY+
  MMETSP1325-20131115|1454_1 33 DYQAALTQYE 42
                9********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       659  (0.0482007); expected 273.4 (0.02)
Passed bias filter:                      537  (0.0392774); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.99u 0.42s 00:00:01.41 Elapsed: 00:00:00.56
# Mc/sec: 1917.09
//
Query:       MMETSP1325-20131115|1463_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 734.54
//
Query:       MMETSP1325-20131115|1464_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-11   42.4   5.1    4.2e-11   42.4   3.5    1.5  1  PF09802.4  Preprotein translocase subunit Sec66
  ------ inclusion threshold ------
       0.11   12.1   0.8       0.17   11.5   0.5    1.4  1  PF10627.4  Curli assembly protein CsgE
       0.15   10.9   5.4        0.2   10.5   3.8    1.3  1  PF07851.8  TMPIT-like protein
        3.6    7.1   9.8          5    6.6   6.3    1.5  1  PF10828.3  Protein of unknown function (DUF2570)
        4.4    5.2  11.6        4.5    5.2   8.0    1.0  1  PF10221.4  Cell cycle and development regulator
        6.6    6.4  18.0        8.1    6.1  12.5    1.2  1  PF06459.7  Ryanodine Receptor TM 4-6


Domain annotation for each model (and alignments):
>> PF09802.4  Preprotein translocase subunit Sec66
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   3.5   1.8e-14   4.2e-11      71     185 ..       9     121 ..       1     130 [. 0.76

  Alignments for each domain:
  == domain 1    score: 42.4 bits;  conditional E-value: 1.8e-14
   PF09802.4  71 ekvlkaaLLrRavEairRiiklkeakpalekLyqnGsvgddlwqrfqraeKlveeElkdvvqEaealkpgWvqtifqsakEivfNealrrrleeiqer..keeekelwelkkdkiee 185
                 e  lk aL++R+v ++  +  ++ ++ +++ +y +  +g   +q fq a+ +  eEl  v +Eae+ +pgW+++i q    + +   l + +ee++++  keee +  e+kk+ +++
  MMETSP1325-20131115|1464_1   9 EVQLKQALMKRCVADVPMLQFMQGEERKVQRMYSSSMIGAASYQSFQDAMAIASEELEAVKAEAEEIQPGWGEQIWQQGMHLHN--YL-KSMEEHKAKvkKEEEDAAAEMKKA-VKK 121
                 5559**************999*******************************************************98766543..33.233333333003333444455544.333 PP

>> PF10627.4  Curli assembly protein CsgE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.5   7.6e-05      0.17      12      96 ..      44     128 ..      41     147 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 7.6e-05
   PF10627.4  12 trlGhdFyfefsskwrdisltekfnltikErvtaraGslitvevnrkviyqtflsprkrelkekaeqAielvidalaqvkaeall 96 
                 + +G   y++f +++   s++ +   +  E++ + +G  i+ +  +   y   ++ +k+++k++ e+A++  ++a+++ k  ++ 
  MMETSP1325-20131115|1464_1  44 SMIGAASYQSFQDAMAIASEELEAVKAEAEEIQPGWGEQIWQQGMHLHNYLKSMEEHKAKVKKEEEDAAAEMKKAVKKEKEAEKQ 128
                 55677778888888877776666666668***********************************************999876643 PP

>> PF07851.8  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.8   8.9e-05       0.2      13      83 ..      51     125 ..      46     153 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 8.9e-05
   PF07851.8  13 fkeleethkkykqkleel....eklqekcasaikkqkkrlkelkkslkklkkkltkeekekvekleeeikerkaq 83 
                 +++ +++ +   ++le +    e++q    ++i +q  +l++  ks+++ k+k++kee+++ +++++ +k+ k +
  MMETSP1325-20131115|1464_1  51 YQSFQDAMAIASEELEAVkaeaEEIQPGWGEQIWQQGMHLHNYLKSMEEHKAKVKKEEEDAAAEMKKAVKKEKEA 125
                 5666666655555555551111556666789**************************************998863 PP

>> PF10828.3  Protein of unknown function (DUF2570)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.3    0.0022         5      18      80 ..      81     143 ..      75     151 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0022
   PF10828.3  18 gwlwyqsqkids.LkaenkaqaqtieqqekankrLseaLeqErqAVekqqkianelkrkveena 80 
                   +w+q  ++ + Lk   + +a++ ++ e+a  ++++a+++E++A ekq ki++e k+k+ e+a
  MMETSP1325-20131115|1464_1  81 EQIWQQGMHLHNyLKSMEEHKAKVKKEEEDAAAEMKKAVKKEKEA-EKQAKISEEDKEKLAEQA 143
                 568999988865499999**************************9.788888888777765543 PP

>> PF10221.4  Cell cycle and development regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   8.0     0.002       4.5     530     632 ..      55     165 ..       9     173 .] 0.53

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.002
   PF10221.4 530 deqyRvlfvELeklvkkyvaase.rHkavletlmttrsadkeleeddeavdkrfvkeeffek..sseaadserlksvsdeeeeeleese.....kikdspdspeilekkkk 632
                 ++ + ++ +ELe +        +    ++ +  m + +  k++ee++++v+k ++     +k   ++ +++e++ ++s+e++e+l+e+      k ++++ +p+ l+k+k+
  MMETSP1325-20131115|1464_1  55 QDAMAIASEELEAVKAEAEEIQPgWGEQIWQQGMHLHNYLKSMEEHKAKVKKEEEDAAAEMKkaVKKEKEAEKQAKISEEDKEKLAEQAaaellKEAEAEAEPTGLKKRKS 165
                 666666666666543333333321345677777777777777777777777777766666664434455556666666666666666554554434444444444443333 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  12.5    0.0036       8.1      34     138 ..      49     168 ..      21     173 .] 0.40

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0036
   PF06459.7  34 et.geteeeevgsd..afgldvkkeggkr..........hdaepgLgdvsevepeepptpeeaaaekkelkeeeeepkseaekadledgek...eekaeeeseekpeeakaakkkaekkke 138
                 ++ ++++++ + +   +  +++++e+ +            + ++ L  + e +++ ++ +e+aaae k++ ++e+e++++a k ++ed ek   ++ ae+ +e+++e +    kk +++k+
  MMETSP1325-20131115|1464_1  49 ASyQSFQDAMAIASeeLEAVKAEAEEIQPgwgeqiwqqgMHLHNYLKSMEEHKAKVKKEEEDAAAEMKKAVKKEKEAEKQA-KISEEDKEKlaeQAAAELLKEAEAEAEPTGLKKRKSSKK 168
                 444444333332220022233333322212333333445566666666666666666666666665553333332222222.223333333222444444444444443333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2642  (0.193242); expected 273.4 (0.02)
Passed bias filter:                      887  (0.0648771); expected 273.4 (0.02)
Passed Vit filter:                       143  (0.0104593); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.82u 0.43s 00:00:01.25 Elapsed: 00:00:00.53
# Mc/sec: 782.21
//
Query:       MMETSP1325-20131115|1462_1  [L=713]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-79  262.6  15.2    1.2e-31  109.0   4.5    3.2  3  PF00637.15 Region in Clathrin and VPS
  ------ inclusion threshold ------
      0.017   15.5   1.9       0.15   12.7   0.0    3.5  4  PF13428.1  Tetratricopeptide repeat
        1.1    8.8   6.2        9.1    5.8   0.0    3.5  4  PF13414.1  TPR repeat


Domain annotation for each model (and alignments):
>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.1   2.6e-18   1.2e-14      59     142 ..       4      87 ..       1      88 [. 0.95
   2 !  104.7   0.1   5.8e-34   2.6e-30       4     141 ..      97     236 ..      94     238 .. 0.95
   3 !  109.0   4.5   2.7e-35   1.2e-31       1     143 []     242     384 ..     242     384 .. 0.98

  Alignments for each domain:
  == domain 1    score: 54.0 bits;  conditional E-value: 2.6e-18
                 HHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGGTTTTT---TTHHHHHHHHHHHH-STT CS
  PF00637.15  59 ekleeflkknnnydlekvaklcekadlyeeavilykkinefkkaisllkklkdfddaieyakkasdpelwekllealldnkkfe 142
                  +leef++  n  +++ ++++c ++++y++a++l++ i++++k++ ++ +lk++++a ++a+ka+   +w+++ +a++  ++f+
  MMETSP1325-20131115|1462_1   4 GDLEEFVSAPNVANIQAIGERCFDEQMYNAAKLLFTSIGNNAKLALCYVHLKMYREATDAAAKANAVSTWKEVSKACVFAEEFR 87 
                 68***************************************************************************9888775 PP

  == domain 2    score: 104.7 bits;  conditional E-value: 5.8e-34
                 H-TT--STTTHHHHHTTT-GGGGTGGGTS--...-S--HHHHHHHHHHHHHTT--HHHHHTTSS---.S-TTHHHHHHHT-SSHHHHHHHH----THHHHSS-.SSTT--TTGGG..TTTTT---TTHHHHHHHHHHHH-ST CS
  PF00637.15   4 ltdpidlsevvklfekaglleelieyLekvlketsrenpavqtallelyakyedpekleeflkknnn.ydlekvaklcekadlyeeavilykkinefkkaisl.lkklkdfddai..eyakkasdpelwekllealldnkkf 141
                 + +p++l+e+++l+e+ag+++eli+ Le++l + + +++ v+t+l +ly ky + ekl+e++k + + ++++k+++ c ka+l++eav+lyk+ ++ + a++l ++++ +f++++  + ++k++++e+++  ++++l+ ++ 
  MMETSP1325-20131115|1462_1  97 IVHPDHLEELITLYERAGQPDELIKMLEQGL-GLEGAHAGVFTELGILYSKYLP-EKLMEHIKIFCSrMNIPKLLRACDKARLWDEAVFLYKNDEQQDSAVKLmIEHPTAFQHDLflDCCQKVRNTEIYYMSIGFYLEMQPM 236
                 689****************************.7889*****************6.********88777**********************************88*********************************99875 PP

  == domain 3    score: 109.0 bits;  conditional E-value: 2.7e-35
                 HHHH-TT--STTTHHHHHTTT-GGGGTGGGTS--...-S--HHHHHHHHHHHHHTT--HHHHHTTSS---S-TTHHHHHHHT-SSHHHHHH...HH----THHHHSS-SSTT--TTGGGTTTTT---TTHHHHHHHHHHHH-STTG CS
  PF00637.15   1 lneltdpidlsevvklfekaglleelieyLekvlketsrenpavqtallelyakyedpekleeflkknnnydlekvaklcekadlyeeavi...lykkinefkkaisllkklkdfddaieyakkasdpelwekllealldnkkfel 143
                 l++lt+ +d+s+vv++++ka++l++  +yL++v+   +++ +av++al+ely+++ed+++l+++++ ++n+d+  +a++ ek++l e+++i   lyk++ +++++i+l+k +k+f+dai++a  +++ el+e+ll +++dn+ +e+
  MMETSP1325-20131115|1462_1 242 LQVLTPNLDHSRVVHQLRKAENLPLAAPYLKSVQ---KENLTAVNEALNELYIEEEDYTSLRTSIDDFDNFDQLALAQKTEKHELLEFRRIaayLYKRNTRYAQSIELSKGDKMFKDAIDTANDSKSAELVEELLRYFVDNEDKEC 384
                 68899*****************************...7889****************************************************************************************************99886 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.65   2.9e+03       6      27 ..      46      67 ..      44      73 .. 0.83
   2 ?   12.7   0.0   3.2e-05      0.15       6      42 ..     105     141 ..     100     143 .. 0.83
   3 ?   -3.1   0.0         3   1.4e+04       2      22 ..     176     196 ..     175     197 .. 0.77
   4 ?   -2.9   0.0         3   1.4e+04      22      34 ..     351     363 ..     340     374 .. 0.63

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.65
   PF13428.1  6 alarallalGdpdeAiallrra 27
                +la  + +l  + eA +++ +a
  MMETSP1325-20131115|1462_1 46 KLALCYVHLKMYREATDAAAKA 67
                6888999999999999988876 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 3.2e-05
   PF13428.1   6 alarallalGdpdeAiallrralalaPddaealllLa 42 
                 +l  +++++G+pde i++l++ l l   +a + ++L+
  MMETSP1325-20131115|1462_1 105 ELITLYERAGQPDELIKMLEQGLGLEGAHAGVFTELG 141
                 68899****************9988888777777665 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 3
   PF13428.1   2 eallalarallalGdpdeAia 22 
                 +++ + + ++ + ++ d A++
  MMETSP1325-20131115|1462_1 176 RLWDEAVFLYKNDEQQDSAVK 196
                 678888888888889898887 PP

  == domain 4    score: -2.9 bits;  conditional E-value: 3
   PF13428.1  22 allrralalaPdd 34 
                 +++++a+ +a d+
  MMETSP1325-20131115|1462_1 351 KMFKDAIDTANDS 363
                 5666666665543 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   4.9e+03       9      26 ..      21      38 ..      18      40 .. 0.80
   2 ?    3.8   0.6    0.0085        39      42      64 ..      46      67 ..      43      71 .. 0.85
   3 ?    5.8   0.0     0.002       9.1      12      49 ..     109     146 ..     100     158 .. 0.84
   4 ?   -2.2   0.1      0.67     3e+03       6      24 ..     326     345 ..     321     348 .. 0.65

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.1
   PF13414.1  9 lGnalfkegdydeAieay 26
                 G+++f e+ y  A  ++
  MMETSP1325-20131115|1462_1 21 IGERCFDEQMYNAAKLLF 38
                589999999999997666 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.0085
   PF13414.1 42 nlAlaylklgkdyeeAledyekA 64
                 lAl+y +l  +y+eA +++ kA
  MMETSP1325-20131115|1462_1 46 KLALCYVHLK-MYREATDAAAKA 67
                59******95.9***99988887 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.002
   PF13414.1  12 alfkegdydeAieayekAleldpnnaelyynlAlaylk 49 
                  + ++g++de i+++e++l l+  +a ++  l+ +y k
  MMETSP1325-20131115|1462_1 109 LYERAGQPDELIKMLEQGLGLEGAHAGVFTELGILYSK 146
                 57789****************************99977 PP

  == domain 4    score: -2.2 bits;  conditional E-value: 0.67
   PF13414.1   6 lkelGnalfkeg.dydeAie 24 
                 +++ + +l+k++ +y+++ie
  MMETSP1325-20131115|1462_1 326 FRRIAAYLYKRNtRYAQSIE 345
                 55556666665558888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       507  (0.0370831); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.10u 0.36s 00:00:01.46 Elapsed: 00:00:00.71
# Mc/sec: 2406.48
//
Query:       MMETSP1325-20131115|1465_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-20   70.2   0.0    1.2e-19   69.7   0.0    1.2  1  PF00085.15 Thioredoxin
    2.2e-06   27.7   0.0    1.2e-05   25.3   0.0    2.0  1  PF13098.1  Thioredoxin-like domain
     0.0033   16.9   0.0     0.0049   16.4   0.0    1.2  1  PF00578.16 AhpC/TSA family
  ------ inclusion threshold ------
      0.031   14.3   0.0      0.049   13.6   0.0    1.4  1  PF13905.1  Thioredoxin-like
      0.078   12.9   0.0       0.16   11.9   0.0    1.6  1  PF13899.1  Thioredoxin-like
      0.078   12.4   0.1       0.16   11.4   0.0    1.5  1  PF08534.5  Redoxin


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   0.0   5.3e-23   1.2e-19       6     102 ..      45     143 ..      40     145 .. 0.87

  Alignments for each domain:
  == domain 1    score: 69.7 bits;  conditional E-value: 5.3e-23
                 SHHHHHHHHHH.HHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETTTT...HHHHHHTT--SSSEEEEESSSSEEEEE---.-HHHHHHHHH CS
  PF00085.15   6 tkenfeeevak.sdklvlvefyApwCGhCkalaPeyeklaeelkekvvlakvdvden...kdlaseygvegiPtlklfkngkkveevegarekeklvaflk 102
                 +++ f++++++ +d+lv+++f ++wCG+Ck ++P++ ++++e+  + v++kv  d++   ++l ++ gv+++P ++++kng+kv+ v+ga + ++l+ +++
  MMETSP1325-20131115|1465_1  45 SEADFDATISDaGDSLVVIDFSTTWCGPCKVMEPKFVAMSDEYP-SAVFVKVIGDSSpdaSKLMKREGVRSVPAFHFWKNGEKVDMVNGA-NMDALTGAVS 143
                 57789***9996789*****************************.9999999777552226788999***********************.9998887765 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   5.3e-09   1.2e-05       6     102 ..      59     133 ..      54     138 .. 0.80

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 5.3e-09
   PF13098.1   6 krvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpGy 102
                 + v+++f++++C+ Ck ++++  +    ++++     +++v++  +++                + ++l+++ gvr++P++ f  ++G++v +++G+
  MMETSP1325-20131115|1465_1  59 SLVVIDFSTTWCGPCKVMEPKFVA---MSDEYP---SAVFVKVIGDSS---------------PDASKLMKREGVRSVPAFHFW-KNGEKVDMVNGA 133
                 679******************996...455654...556666665542...............23458***************9.69******9997 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.2e-06    0.0049      19      78 ..      52     108 ..      38     124 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 2.2e-06
  PF00578.16  19 slsdlkgkpvvLffypkdfcpvCttelpalaelyeefkkkgvevigvsvdspeshkkfae 78 
                 ++sd  ++ vv+ f ++ +c +C+   p++ ++ +e+ ++   ++ v  ds  +  k ++
  MMETSP1325-20131115|1465_1  52 TISDAGDSLVVIDFSTT-WCGPCKVMEPKFVAMSDEYPSA--VFVKVIGDSSPDASKLMK 108
                 67999999*********.*******************954..444444444444444444 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.2e-05     0.049       2      39 ..      59      90 ..      57     124 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.2e-05
   PF13905.1  2 kivllyfaaswcppckaftpelkelyeklkaskdkvei 39
                 +v+++f+++wc+pck   p+  ++ +++       + 
  MMETSP1325-20131115|1465_1 59 SLVVIDFSTTWCGPCKVMEPKFVAMSDEYP------SA 90
                5899*****************999999997......23 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   6.9e-05      0.16      19      40 ..      60      81 ..      46     122 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.9e-05
   PF13899.1 19 pllvifgadwcpdCqaldrdvl 40
                 + ++f  +wc++C++++  + 
  MMETSP1325-20131115|1465_1 60 LVVIDFSTTWCGPCKVMEPKFV 81
                5789*************87753 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   6.9e-05      0.16      18      83 ..      44     110 ..      20     120 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.9e-05
                 ---EEHHH...HTTSEEEEE---------IIIIIHHHHTHHHH.HH----EEEEE-SS-HHHHHHHHHT CS
   PF08534.5  18 gktvslsd...fkgkkvvlvfvpgafcptCsaehpyleklaklakekgvdvvavvaqndafvkeawake 83 
                 g++ + ++    +g ++v+  + +++c++C+   p +   ++++ +  +    v+ ++++ +++ +++e
  MMETSP1325-20131115|1465_1  44 GSEADFDAtisDAGDSLVVIDFSTTWCGPCKVMEPKFVAMSDEYPSAVFVK--VIGDSSPDASKLMKRE 110
                 4554444444447888888888888*******9888888888877774333..4444444466665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1124.82
//
Query:       MMETSP1325-20131115|1466_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   15.0   1.1        2.4    8.5   0.1    2.3  2  PF14357.1  Domain of unknown function (DUF4404)
      0.023   14.1   0.9        2.7    7.4   0.1    2.2  2  PF11220.3  Protein of unknown function (DUF3015)
       0.03   13.2   1.2       0.56    9.1   0.2    2.1  2  PF03480.8  Bacterial extracellular solute-binding protein, family 7
      0.031   13.1   0.2       0.05   12.4   0.2    1.2  1  PF01573.11 Bromovirus movement protein
      0.037   14.0   0.5       0.32   11.0   0.2    2.0  2  PF00804.20 Syntaxin
      0.039   13.8   9.2        3.7    7.4   2.1    2.7  2  PF13801.1  Heavy-metal resistance
      0.045   13.1   0.3          4    6.8   0.0    2.1  2  PF10083.4  Uncharacterized protein conserved in bacteria (DUF2321)
      0.055   12.6   1.0        2.5    7.1   0.2    2.0  2  PF06798.7  PrkA serine protein kinase C-terminal domain
      0.055   12.9   6.4        3.7    7.0   0.2    3.0  3  PF04751.9  Protein of unknown function (DUF615)
      0.073   12.4   0.5      0.091   12.0   0.3    1.1  1  PF00038.16 Intermediate filament protein
      0.079   12.0   0.8        3.5    6.6   0.1    2.0  2  PF14133.1  Domain of unknown function (DUF4300)
       0.18   12.0   5.5        1.3    9.2   1.1    2.2  2  PF07739.8  TipAS antibiotic-recognition domain
       0.29   11.3   2.8       0.57   10.4   1.0    2.0  2  PF03448.12 MgtE intracellular N domain
       0.76    8.0   8.0        4.5    5.4   5.6    1.8  1  PF04632.7  Fusaric acid resistance protein family
        2.8    8.1   7.8         34    4.7   0.1    3.8  4  PF01816.12 Leucine rich repeat variant


Domain annotation for each model (and alignments):
>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0026       2.4       5      41 ..       8      44 ..       6      73 .. 0.84
   2 ?    5.5   0.1     0.023        21       5      46 ..      81     121 ..      79     142 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0026
   PF14357.1  5 lLekLheeLeqtdsldeetraeLkelrddieealeee 41
                 Le+Lh+ +    +l+e+++++++++ ++i++ +++ 
  MMETSP1325-20131115|1466_1  8 ALEALHAVMGVHXALTEKDQQQFRQMFANIRKEVRSA 44
                79******************************99883 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.023
   PF14357.1   5 lLekLheeLeqtdsldeetraeLkelrddieealeeedasea 46 
                  Le+Lh+ +  + +l+e+++++++e    i++++++ +a+++
  MMETSP1325-20131115|1466_1  81 ALEALHAVMV-VRELTEKDQQQFRETFSAIRKKVAKARAPAE 121
                 6899999887.7899******************999433332 PP

>> PF11220.3  Protein of unknown function (DUF3015)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1     0.007       6.3      84     118 ..       7      37 ..       1      64 [. 0.68
   2 ?    7.4   0.1     0.003       2.7      75     108 ..      74     107 ..      44     133 .. 0.59

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.007
   PF11220.3  84 ealealavllgveeedrarfkavlkenfseifpse 118
                 +aleal +++gv+     ++++  +++f+++f++ 
  MMETSP1325-20131115|1466_1   7 DALEALHAVMGVH----XALTEKDQQQFRQMFANI 37 
                 799*********5....555555566666666543 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.003
   PF11220.3  75 aedmarGeGealealavllgveeedrarfkavlk 108
                   ++ +   eal+a+ v+ + +e+d+++f+++  
  MMETSP1325-20131115|1466_1  74 MANLPVDALEALHAVMVVRELTEKDQQQFRETFS 107
                 2333344446666666666677777777776654 PP

>> PF03480.8  Bacterial extracellular solute-binding protein, family 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.043        39     250     281 ..       9      40 ..       3      44 .. 0.79
   2 ?    9.1   0.2   0.00062      0.56     238     284 ..      70     114 ..      54     116 .. 0.68

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.043
                 HHHHHH.---EE...E---SHHHHHHTHHHHHH CS
   PF03480.8 250 lkklke.agvevieltpeeleafrealkpvyke 281
                 l+ l +  gv+   lt++++++fr++++++ ke
  MMETSP1325-20131115|1466_1   9 LEALHAvMGVHX-ALTEKDQQQFRQMFANIRKE 40 
                 556666667777.89************999888 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00062
                 HHHHHH----SHHHHHHH---EE...E---SHHHHHHTHHHHHHHHH CS
   PF03480.8 238 qnklveeleeealkklkeagvevieltpeeleafrealkpvykeifa 284
                   ++++ l  +al+ l  a ++v+elt++++++fre ++++ k+ +a
  MMETSP1325-20131115|1466_1  70 SEDEMANLPVDALEALH-AVMVVRELTEKDQQQFRETFSAIRKK-VA 114
                 44444444444444443.789999***************99998.54 PP

>> PF01573.11  Bromovirus movement protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   5.5e-05      0.05       7      68 ..      52     109 ..      49     117 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.5e-05
  PF01573.11   7 svsakdeeslekevsealsssvkknlktkgCvalelknsealssleLvsketksfltklsdk 68 
                  v+ kd+ +l+ +v  a+s+++++nl++ +  al+++    + + eL+ k+++ f + +s+ 
  MMETSP1325-20131115|1466_1  52 HVDVKDLRQLAAAVLAAMSEDEMANLPVDALEALHAV----MVVRELTEKDQQQFRETFSAI 109
                 57899**********************9999999999....8888********998877653 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.23   2.1e+02      48      68 ..      24      44 ..      19      52 .. 0.84
   2 ?   11.0   0.2   0.00035      0.32      22      69 ..      54     117 ..      26     146 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.23
  PF00804.20 48 eeltaeikklankirskLksl 68
                e+ ++++++++ +ir++++s 
  MMETSP1325-20131115|1466_1 24 EKDQQQFRQMFANIRKEVRSA 44
                788999999999999998875 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00035
  PF00804.20  22 kveelkrlhsrilaspdpd................kqtkeeleeltaeikklankirskLksle 69 
                 +v++l++l+ + la++ +d                  ++e  e+ +++++ ++++ir+k+ +  
  MMETSP1325-20131115|1466_1  54 DVKDLRQLAAAVLAAMSEDemanlpvdalealhavMVVRELTEKDQQQFRETFSAIRKKVAKAR 117
                 799**************999***************9***********************98755 PP

>> PF13801.1  Heavy-metal resistance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   2.1    0.0041       3.7      35      64 ..      15      44 ..       3      87 .. 0.83
   2 ?    6.4   2.4     0.008       7.3      33      68 ..      85     120 ..      60     130 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0041
   PF13801.1 35 lrpaalaLpeeqrralraalrearrevral 64
                +  +  aL+e +++++r+++ + r+evr +
  MMETSP1325-20131115|1466_1 15 VMGVHXALTEKDQQQFRQMFANIRKEVRSA 44
                5556789**************999999975 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.008
   PF13801.1  33 helrpaalaLpeeqrralraalrearrevralrral 68 
                  +   ++++L+e +++++r+ + + r++v+++r+ +
  MMETSP1325-20131115|1466_1  85 LHAVMVVRELTEKDQQQFRETFSAIRKKVAKARAPA 120
                 555567899*************99999999999755 PP

>> PF10083.4  Uncharacterized protein conserved in bacteria (DUF2321)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.019        17      83     117 ..       7      41 ..       5      72 .. 0.83
   2 ?    6.8   0.0    0.0043         4      83     123 ..      80     119 ..      75     137 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.019
   PF10083.4  83 rkleaakelveeddeLsadekeklkedledlvvet 117
                 ++lea+++++  +  L+ ++++++++   ++ +e 
  MMETSP1325-20131115|1466_1   7 DALEALHAVMGVHXALTEKDQQQFRQMFANIRKEV 41 
                 6899*******9**************999998874 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0043
   PF10083.4  83 rkleaakelveeddeLsadekeklkedledlvvetpktkva 123
                 ++lea+++++    eL+ +++++++e+ + + +  +k+++ 
  MMETSP1325-20131115|1466_1  80 DALEALHAVMV-VRELTEKDQQQFRETFSAIRKKVAKARAP 119
                 67899988887.89*****************9999998875 PP

>> PF06798.7  PrkA serine protein kinase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0      0.02        18      61      98 ..       5      42 ..       2      48 .. 0.90
   2 ?    7.1   0.2    0.0028       2.5      41     100 ..      60     116 ..      48     141 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.02
   PF06798.7 61 pldvleeLeaiikdhesiaeeerekYleflkvvkkeYe 98
                p+d le+L+a++  h  ++e++++++ ++   ++ke +
  MMETSP1325-20131115|1466_1  5 PVDALEALHAVMGVHXALTEKDQQQFRQMFANIRKEVR 42
                999*************************9999998876 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0028
   PF06798.7  41 fiikalsnalesdseekclnpldvleeLeaiikdhesiaeeerekYleflkvvkkeYeei 100
                  +  a+  a+++  +e +  p+d le+L+a++    +++e++++++ e  ++++k+ +++
  MMETSP1325-20131115|1466_1  60 QLAAAVLAAMSE--DEMANLPVDALEALHAVMVV-RELTEKDQQQFRETFSAIRKKVAKA 116
                 555555555555..777788**********9999.99***********999888887664 PP

>> PF04751.9  Protein of unknown function (DUF615)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.2     0.004       3.7     119     142 ..      20      43 ..       6      62 .. 0.80
   2 ?    5.1   0.2     0.016        14      19      55 ..      58      96 ..      50      98 .. 0.76
   3 ?    5.8   0.3    0.0098         9     117     147 ..      90     120 ..      79     130 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.004
   PF04751.9 119 eeypdaDrqqLRqlvrqarkekkk 142
                  ++ + D+qq+Rq+  ++rke  +
  MMETSP1325-20131115|1466_1  20 XALTEKDQQQFRQMFANIRKEVRS 43 
                 566788**************9876 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.016
   PF04751.9 19 lqkl.GeeLvklskkqlkklplde.elldalaeakrikk 55
                l +l +  L+++s++++++lp+d  e l+a++ ++++++
  MMETSP1325-20131115|1466_1 58 LRQLaAAVLAAMSEDEMANLPVDAlEALHAVMVVRELTE 96
                55551456999**********997458889999888865 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.0098
   PF04751.9 117 lleeypdaDrqqLRqlvrqarkekkknkppk 147
                 +++e+ + D+qq+R+    +rk+ +k+++p+
  MMETSP1325-20131115|1466_1  90 VVRELTEKDQQQFRETFSAIRKKVAKARAPA 120
                 56789999**************999977764 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3    0.0001     0.091      41     112 ..      19     113 ..       7     130 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.0001
  PF00038.16  41 ksaevsklkelyekelaelrkqldeltkerarleleldnlreeledlrekyeke................lnkresaEaelaklr.......kdl 112
                 + a ++k+++ + ++ a++rk++ +++  ++ ++++++ lr+ ++ + + +++                 +  re +E++ +++r       k++
  MMETSP1325-20131115|1466_1  19 HXALTEKDQQQFRQMFANIRKEVRSASGVEGSCHVDVKDLRQLAAAVLAAMSEDemanlpvdalealhavMVVRELTEKDQQQFRetfsairKKV 113
                 566778999********************************999888777766669999999999999995666666666666662222222555 PP

>> PF14133.1  Domain of unknown function (DUF4300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0      0.02        19     121     141 ..      20      40 ..       8      52 .. 0.84
   2 ?    6.6   0.1    0.0039       3.5     120     155 ..      91     126 ..      60     139 .. 0.73

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.02
   PF14133.1 121 kllkkeekekFktlFseikte 141
                   l+++++++F ++F++i  e
  MMETSP1325-20131115|1466_1  20 XALTEKDQQQFRQMFANIRKE 40 
                 6789*************9876 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0039
   PF14133.1 120 kkllkkeekekFktlFseiktektkdvkkhaekikk 155
                   +l+++++++F ++Fs+i  +  k     ++ ++k
  MMETSP1325-20131115|1466_1  91 VRELTEKDQQQFRETFSAIRKKVAKARAPAESPVAK 126
                 4689***************99887766655555555 PP

>> PF07739.8  TipAS antibiotic-recognition domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.025        23      22      74 ..      19      75 ..       6      90 .. 0.72
   2 ?    9.2   1.1    0.0014       1.3      22      64 ..      89     130 ..      68     132 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.025
                -----------TTHHHHHHHHHHHHHHH--..--TT----HHHHHHHH---T..TSS CS
   PF07739.8 22 lkslskedkeelkkeweelfaelaaamekg..vdpdseevqelakehrdlle..eft 74
                  +l+++d++++ + + ++ +e+++a + +  + +d ++ ++la++  + ++  e+ 
  MMETSP1325-20131115|1466_1 19 HXALTEKDQQQFRQMFANIRKEVRSASGVEgsCHVDVKDLRQLAAAVLAAMSedEMA 75
                56899******************9996544347777788888887777777655555 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0014
                 -..----------TTHHHHHHHHHHHHHHH----TT----HHHHH CS
   PF07739.8  22 l..kslskedkeelkkeweelfaelaaamekgvdpdseevqelak 64 
                 +  ++l+++d++++ +++ ++ +++a+a++    ++s+ ++++a+
  MMETSP1325-20131115|1466_1  89 MvvRELTEKDQQQFRETFSAIRKKVAKARAP---AESPVAKAAAE 130
                 455799*********************9987...78888887775 PP

>> PF03448.12  MgtE intracellular N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.2   1.1e+03       9      29 ..      21      41 ..       5      44 .. 0.69
   2 ?   10.4   1.0   0.00063      0.57      54      95 ..      62     104 ..      57     116 .. 0.65

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 1.2
                TCCCS-HHHHHHHHHHS-HHH CS
  PF03448.12  9 lleeldeeeraallrllpkee 29
                +l e d++++++++ ++ ke 
  MMETSP1325-20131115|1466_1 21 ALTEKDQQQFRQMFANIRKEV 41
                445566677777777766665 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00063
                 HHHHHCTS-HHHHHHH.HCCCHCCHHHHHHHCS-CCCHHHHHC CS
  PF03448.12  54 laelleeldsDdavdl.leelpeekveellsaldeeereeiee 95 
                 +a++l+ ++ D++++l ++ l++ ++  ++++l e+++++++e
  MMETSP1325-20131115|1466_1  62 AAAVLAAMSEDEMANLpVDALEALHAVMVVRELTEKDQQQFRE 104
                 5666666666666666666666666666666666666666655 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   5.6    0.0049       4.5     253     596 ..      30     119 ..       5     159 .. 0.40

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0049
   PF04632.7 253 laalldelaa.....alaaeeleaavaaLrarlaalrpeaeadsdtaaallarlaellaeladalaalralqaaiaarrparlarhrdhgaallnglraalaillagllWiatgWpsGatavllaavvcslfatldnpapallqflvgtllavllallylfvvlPavdgfplLalvlapplllgglllarprtaliglglavffalllgpqnpysfdfasflnsalAillGvllaalvfrlirpvsaewaarrllralrrdlarlaagraaeararfesrmldrlaqlaprlaaapaasraalrdalaalrvgravlrLrralaralpaparaaidavlaalafraraa 596
                 ++++++ +++     +  ++ ++++v+ Lr+ +aa  ++ +                                                                                                                                                                                                                                                                 ++++++  + al++ +av+ +r++ ++  +++ r++  a+ + +a +ara 
  MMETSP1325-20131115|1466_1  30 FRQMFANIRKevrsaSGVEGSCHVDVKDLRQLAAAVLAAMS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDEMANLPVDALEALHAVMVVRELTEK-DQQQFRETFSAIRKKVA-KARAP 119
                 44444444444444433444444444444444444444444.................................................................................................................................................................................................................................................................333333333333333333333333333.33333333333333333.22222 PP

>> PF01816.12  Leucine rich repeat variant
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.038        34      10      21 ..       3      12 ..       2      13 .. 0.89
   2 ?    0.9   0.1      0.63   5.7e+02      12      25 ..      60      73 ..      58      74 .. 0.79
   3 ?    4.7   0.1     0.038        34      10      21 ..      76      85 ..      75      86 .. 0.89
   4 ?   -2.7   0.1       8.7   7.9e+03       3      15 ..     109     120 ..     108     121 .. 0.58

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.038
                H..S-GGGGGGG CS
  PF01816.12 10 rPdlPpeaLerL 21
                +  lP++aLe+L
  MMETSP1325-20131115|1466_1  3 N--LPVDALEAL 12
                5..*******98 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.63
                .S-GGGGGGGTT-S CS
  PF01816.12 12 dlPpeaLerLahDP 25
                +l +++L +++ D+
  MMETSP1325-20131115|1466_1 60 QLAAAVLAAMSEDE 73
                47889999999997 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.038
                H..S-GGGGGGG CS
  PF01816.12 10 rPdlPpeaLerL 21
                +  lP++aLe+L
  MMETSP1325-20131115|1466_1 76 N--LPVDALEAL 85
                5..*******98 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 8.7
                 HHHHHHHH..S-G CS
  PF01816.12   3 VRaaVArrPdlPp 15 
                 +R  VA   ++P+
  MMETSP1325-20131115|1466_1 109 IRKKVAKA-RAPA 120
                 57777754.4665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1029  (0.0752633); expected 273.4 (0.02)
Passed bias filter:                      759  (0.0555149); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.60
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|1461_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-06   27.3   0.0    3.6e-06   26.5   0.0    1.3  1  PF01067.17 Calpain large subunit, domain III


Domain annotation for each model (and alignments):
>> PF01067.17  Calpain large subunit, domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   2.7e-10   3.6e-06      29     141 ..      51     171 ..      38     174 .. 0.80

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 2.7e-10
  PF01067.17  29 tNPqfrlslkepddede....kctvliaLmqknrrkkrkkgeenltigfavykv..kkkekeldkeffkknksiarsstfinsrevverfrLppge........YvivPstfepneegdFlLrvfse 141
                 +NP f+l+l+ p  +      +  v   L+q   +k + k     +igf+v+      ++ + +   ++ + ++ ++ +f+n+  v++r rLp+           ++ P+t+e ++e++F+L v s 
  MMETSP1325-20131115|1461_1  51 KNPLFQLKLTLPGGDGAnppaEADVYAFLTQAVPEKAKPK-----PIGFYVFTDweAARQVRAEG-QVMDSGAVFDKFKFTNRAVVCRRLRLPAALltdpegaaVLLLPCTYEAKQEAEFTLEVVSA 171
                 79*****999999877799998899999999888888777.....9*******964333333333.4555588888889*************975444455568999*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 1203.50
//
Query:       MMETSP1325-20131115|1467_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0033   16.5   0.0        1.7    7.8   0.0    2.3  2  PF12841.2 YvrJ protein family
  ------ inclusion threshold ------
      0.026   14.0   0.3      0.026   14.0   0.2    1.1  1  PF06364.7 Protein of unknown function (DUF1068)
      0.031   14.1   0.7       0.11   12.3   0.4    2.0  1  PF05725.7 FNIP Repeat
      0.089   12.4   0.0        4.4    7.0   0.0    2.0  2  PF05771.6 Poxvirus A31 protein
       0.19   11.3   2.2        9.4    5.8   0.2    2.1  2  PF13013.1 F-box-like domain
        3.1    7.3   5.6         99    2.6   3.9    2.7  1  PF12799.2 Leucine Rich repeats (2 copies)
        3.2    7.9   5.7         11    6.3   0.0    3.1  2  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12841.2  YvrJ protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0019       3.8      25      38 .]      18      31 ..      16      31 .. 0.93
   2 !    7.8   0.0   0.00087       1.7      18      35 ..      40      57 ..      40      60 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0019
   PF12841.2 25 daLtksIneLskai 38
                d+Lt  I++L+++i
  MMETSP1325-20131115|1467_1 18 DELTGNIKDLPQSI 31
                89*********998 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.00087
   PF12841.2 18 vRiEkkldaLtksIneLs 35
                v++E+ +++L +sI++L+
  MMETSP1325-20131115|1467_1 40 VKLEGNIKDLPQSITDLN 57
                789*************97 PP

>> PF06364.7  Protein of unknown function (DUF1068)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.2   1.3e-05     0.026      34      79 ..       2      47 ..       1      64 [. 0.86

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.3e-05
   PF06364.7 34 ealarvsasscpacdcdcsalplltlpkelsnasfedcakrdkevn 79
                e+l  +  +sc+ c+cd  + ++  lp+++++ ++e c k + +++
  MMETSP1325-20131115|1467_1  2 ESLKDMPLTSCNLCNCDELTGNIKDLPQSITDLNLETCVKLEGNIK 47
                677778889******************************9887764 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   5.8e-05      0.11       7      41 ..      24      58 ..      18      61 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.8e-05
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyF 41
                i  LP++++ L+l    + + +i  LP+S++ L++
  MMETSP1325-20131115|1467_1 24 IKDLPQSITDLNLETCVKLEGNIKDLPQSITDLNL 58
                668**********999998999*********9987 PP

>> PF05771.6  Poxvirus A31 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.015        30      87     104 ..      20      37 ..      14      42 .. 0.86
   2 ?    7.0   0.0    0.0022       4.4      85     106 ..      40      61 ..      37      65 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.015
   PF05771.6  87 leGkiykLGksikdLslr 104
                 l+G+i+ L +si+dL+l+
  MMETSP1325-20131115|1467_1  20 LTGNIKDLPQSITDLNLE 37 
                 579*************94 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0022
   PF05771.6  85 isleGkiykLGksikdLslrer 106
                 ++leG+i+ L +si+dL+lr  
  MMETSP1325-20131115|1467_1  40 VKLEGNIKDLPQSITDLNLRMC 61 
                 6789***************864 PP

>> PF13013.1  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.2    0.0048       9.4      21      39 ..      23      41 ..       7      44 .. 0.84
   2 ?    5.8   0.1    0.0048       9.4      21      39 ..      45      63 ..      41      65 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0048
   PF13013.1 21 tllDLPdellelIfnyCkd 39
                 + DLP+ +  l ++ C +
  MMETSP1325-20131115|1467_1 23 NIKDLPQSITDLNLETCVK 41
                699**************87 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0048
   PF13013.1 21 tllDLPdellelIfnyCkd 39
                 + DLP+ +  l ++ C++
  MMETSP1325-20131115|1467_1 45 NIKDLPQSITDLNLRMCQK 63
                599**************97 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   3.9     0.051        99      19      33 ..      23      38 ..       3      65 .. 0.56

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.051
   PF12799.2 19 elanLp.nLktLnLsn 33
                 ++ Lp + + LnL+ 
  MMETSP1325-20131115|1467_1 23 NIKDLPqSITDLNLET 38
                4444443344444442 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   2.6      0.73   1.4e+03       2       9 ..      29      36 ..       8      49 .. 0.66
   2 ?    6.3   0.0    0.0058        11       2      13 ..      51      62 ..      50      66 .] 0.87

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.73
   PF13516.1  2 knLtsLdL 9 
                +++t+L+L
  MMETSP1325-20131115|1467_1 29 QSITDLNL 36
                34556655 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0058
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L ++q
  MMETSP1325-20131115|1467_1 51 QSITDLNLRMCQ 62
                689********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 322.77
//
Query:       MMETSP1325-20131115|1469_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-15   54.7   1.4    2.8e-07   29.2   0.0    2.3  2  PF00036.27 EF hand
    5.5e-12   45.5   0.9    7.1e-12   45.1   0.6    1.2  1  PF13499.1  EF-hand domain pair
    8.8e-10   37.3   1.4    0.00077   18.5   0.0    2.4  2  PF13202.1  EF hand
    1.8e-09   36.5   0.7    0.00094   18.7   0.0    2.3  2  PF13405.1  EF-hand domain
    1.2e-08   34.3   2.5    5.4e-05   22.6   0.1    2.2  2  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.076   12.6   0.9        9.2    5.9   0.1    2.2  2  PF12763.2  Cytoskeletal-regulatory complex EF hand
       0.28   10.6   1.6        1.8    8.0   0.0    2.6  2  PF09851.4  Short C-terminal domain


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.4e-10   2.8e-07       5      29 .]      57      81 ..      53      81 .. 0.92
   2 !   24.7   0.2   3.8e-09   7.5e-06       1      28 [.      94     121 ..      94     122 .. 0.92

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 1.4e-10
                HHHHHCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27  5 aFkefDkDgdGkIsfeEfkealkkl 29
                 Fke+D D++G+I+ eEf++++kk+
  MMETSP1325-20131115|1469_1 57 RFKEADSDNSGQINEEEFVAMVKKM 81
                5*********************996 PP

  == domain 2    score: 24.7 bits;  conditional E-value: 3.8e-09
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkk 28 
                 elk+aF+ +D+ gdG I+f+E++ +++k
  MMETSP1325-20131115|1469_1  94 ELKRAFADADTTGDGGIDFDEMLGLYAK 121
                 89********************988776 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.6   3.6e-15   7.1e-12       5      65 ..      57     118 ..      28     119 .. 0.88

  Alignments for each domain:
  == domain 1    score: 45.1 bits;  conditional E-value: 3.6e-15
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgsels.....deevrevldyifkelDkngdGvlsfeEflqa 65 
                 +Fk+ D+d++g+++ ee++++ k++ ++       d+e+++     f+++D+ gdG ++f+E+l +
  MMETSP1325-20131115|1469_1  57 RFKEADSDNSGQINEEEFVAMVKKMMEDEDeqapsDKELKRA----FADADTTGDGGIDFDEMLGL 118
                 6************************99999977777777777....*****************966 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0     4e-07   0.00077       4      25 .]      57      78 ..      54      79 .. 0.90
   2 !   17.6   0.2   7.8e-07    0.0015       1      21 [.      95     115 ..      95     119 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 4e-07
                HHHHH--S----B-HHHHHHHH CS
   PF13202.1  4 tFrafDlNgDGkIsreELkrlv 25
                 F+++D +++G+I+ eE+ ++v
  MMETSP1325-20131115|1469_1 57 RFKEADSDNSGQINEEEFVAMV 78
                5*****************8865 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 7.8e-07
                 HHHHHHHH--S----B-HHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreEL 21 
                 lk +F  +D+ gDG I+++E+
  MMETSP1325-20131115|1469_1  95 LKRAFADADTTGDGGIDFDEM 115
                 6778****************8 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   4.8e-07   0.00094       4      28 ..      56      80 ..      53      86 .. 0.89
   2 !   16.2   0.1   3.2e-06    0.0062       1      25 [.      94     118 ..      94     131 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 4.8e-07
                ---GCC-------B---HHHHHHH. CS
   PF13405.1  4 eaFklfDkdgdGkidaeELrdaLrk 28
                + Fk  D d++G+i+ eE++++ +k
  MMETSP1325-20131115|1469_1 56 ARFKEADSDNSGQINEEEFVAMVKK 80
                57*******************9985 PP

  == domain 2    score: 16.2 bits;  conditional E-value: 3.2e-06
                 HHH---GCC-------B---HHHHH CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrda 25 
                 el++aF   D++gdG id++E++ +
  MMETSP1325-20131115|1469_1  94 ELKRAFADADTTGDGGIDFDEMLGL 118
                 799******************9765 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.1   2.7e-08   5.4e-05      31      52 ..      58      79 ..      44      81 .. 0.90
   2 !   13.4   0.4     2e-05      0.04      14      50 ..      77     118 ..      76     122 .. 0.80

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 2.7e-08
   PF13833.1 31 frefDtdgdGkisfeEFcvlle 52
                f+e+D d++G i++eEF+++++
  MMETSP1325-20131115|1469_1 58 FKEADSDNSGQINEEEFVAMVK 79
                9******************986 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 2e-05
   PF13833.1  14 l.allglkg....lseeevdilfrefDtdgdGkisfeEFcvl 50 
                 + ++++ ++    +s++e+   f  +Dt gdG i+f+E + l
  MMETSP1325-20131115|1469_1  77 MvKKMMEDEdeqaPSDKELKRAFADADTTGDGGIDFDEMLGL 118
                 55665433477889************************7665 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0062        12      45      70 ..      54      79 ..      39      91 .. 0.75
   2 ?    5.9   0.1    0.0047       9.2      42      65 ..      92     115 ..      85     122 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0062
   PF12763.2 45 lekiwdladidedgkldfeefciamr 70
                ++  ++ ad d+ g+++ eef+ +++
  MMETSP1325-20131115|1469_1 54 VSARFKEADSDNSGQINEEEFVAMVK 79
                44446789*************98766 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0047
   PF12763.2  42 edklekiwdladidedgkldfeef 65 
                 +++l++ +  ad   dg +df+e+
  MMETSP1325-20131115|1469_1  92 DKELKRAFADADTTGDGGIDFDEM 115
                 6789999999************97 PP

>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   1.0      0.38   7.3e+02      23      31 .]       3      11 ..       3      11 .. 0.89
   2 ?    8.0   0.0    0.0009       1.8      14      28 ..      66      80 ..      65      83 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.38
   PF09851.4 23 eakKkkLLg 31
                e++K++LL+
  MMETSP1325-20131115|1469_1  3 ERAKRRLLK 11
                899****96 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0009
   PF09851.4 14 rGeIteEEFeakKkk 28
                +G I eEEF a+ kk
  MMETSP1325-20131115|1469_1 66 SGQINEEEFVAMVKK 80
                799******999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       596  (0.0435927); expected 273.4 (0.02)
Passed bias filter:                      482  (0.0352545); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.45s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 642.04
//
Query:       MMETSP1325-20131115|1470_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.32s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|1472_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 284.85
//
Query:       MMETSP1325-20131115|1471_1  [L=469]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-08   33.0   0.4    4.6e-05   23.0   0.0    2.9  3  PF02146.12 Sir2 family
  ------ inclusion threshold ------
       0.07   13.3   0.0       0.12   12.5   0.0    1.3  1  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.1   0.00075       5.1       1      15 [.      75      89 ..      75      94 .. 0.90
   2 !   23.0   0.0   6.7e-09   4.6e-05      58     107 ..     108     159 ..      97     165 .. 0.91
   3 ?   -0.9   0.0      0.15     1e+03     164     177 ..     184     197 ..     163     199 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00075
                -----TT-------. CS
  PF02146.12  1 GAGiStesGipdfRs 15
                GAGiS+++Gi d+  
  MMETSP1325-20131115|1471_1 75 GAGISVAAGIDDYAT 89
                9***********965 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 6.7e-09
                 T..S---HHHHHHHHHHH---EEEEEE--SS-HHHH----..SEEE----TT CS
  PF02146.12  58 kaeakpnaaHkflkklekkgkllrliTQNidnLekkaGsk..kvvelHGsla 107
                 +++a p+ +H++l+ + ++g l++ i QN d L +kaG    ++ e+HGsl 
  MMETSP1325-20131115|1471_1 108 WKDARPTVTHRVLTAMYESGYLKHWIQQNHDSLPQKAGFPqsSLNEIHGSLH 159
                 56899*********************************98789*******96 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.15
                 HHH-SEEEE----S CS
  PF02146.12 164 veeadlllviGtSl 177
                  e+ dl+l++GtS+
  MMETSP1325-20131115|1471_1 184 EERNDLVLALGTSM 197
                 45689*******98 PP

>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.8e-05      0.12     105     143 ..     414     452 ..     375     456 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.8e-05
   PF10152.4 105 egrltvrkdpryakYfkmlklgVpaeavknKmqaeGldp 143
                 +++ t +    ++kY k++k+g    av ++m+ +G+ +
  MMETSP1325-20131115|1471_1 414 AEEQTPSALLDLSKYDKLVKIGMAMGAVEQRMMKDGVPN 452
                 3333334445699***********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.39s 00:00:01.14 Elapsed: 00:00:00.53
# Mc/sec: 2120.55
//
Query:       MMETSP1325-20131115|1468_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 1218.15
//
Query:       MMETSP1325-20131115|1474_1  [L=1138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-49  165.1  15.8    2.2e-10   40.4   0.2    6.4  6  PF13499.1  EF-hand domain pair
    1.1e-41  136.8  23.9    2.1e-05   23.4   0.0   11.2 11  PF00036.27 EF hand
    2.5e-40  132.6  25.2    0.00044   19.7   0.0   11.8 11  PF13405.1  EF-hand domain
    1.5e-25   87.2  24.8    7.9e-05   21.7   0.1   10.0 10  PF13202.1  EF hand
    2.2e-20   71.9  30.1    3.9e-05   23.0   0.1    9.8 10  PF13833.1  EF-hand domain pair
    2.3e-05   24.2   0.1        1.3    8.9   0.0    4.3  4  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
    0.00015   21.6   0.1        1.2    9.0   0.0    3.8  4  PF09279.6  Phosphoinositide-specific phospholipase C, efhand-like
     0.0037   17.0   0.0       0.17   11.6   0.0    2.6  2  PF12550.3  Transcriptional activator of glycolytic enzymes


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.2   1.3e-10   2.3e-07       2      65 ..      20      81 ..      12      82 .. 0.90
   2 !   20.9   0.0   1.5e-07   0.00026       2      60 ..     108     166 ..     107     172 .. 0.79
   3 !   40.4   0.2   1.3e-13   2.2e-10       3      65 ..     200     260 ..     192     261 .. 0.95
   4 !   40.0   0.1   1.7e-13   2.8e-10       2      64 ..     284     344 ..     283     346 .. 0.94
   5 !   27.8   1.1   1.1e-09   1.9e-06       5      65 ..     376     442 ..     362     442 .. 0.88
   6 !    9.8   0.0   0.00044      0.75       4      34 ..     560     590 ..     537     619 .. 0.76

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 1.3e-10
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65
                l+++F + D+dg+g ++ +eL++ l  +g  ++++ ++   d+++k+lDk+g+G +s+ E+ ++
  MMETSP1325-20131115|1474_1 20 LEDVFATWDVDGSGDITLAELMKGLESWGLLRTMDRMDA--DRLLKNLDKDGSGDISLRELFEF 81
                5678*************************9988666666..488****************9987 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 1.5e-07
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfe 60 
                 l++aF++ D dg+g ++  eL+  l++l+++l+   +++ +++++  +   +dG +++ 
  MMETSP1325-20131115|1474_1 108 LETAFRTWDADGSGAISLGELKSGLTKLHTNLFVNVTERDVRRLLSAIAGTQDGEVTLK 166
                 789******************************55555555555666666778888776 PP

  == domain 3    score: 40.4 bits;  conditional E-value: 1.3e-13
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 +e+F++ D d++g l+++eL++ l++l+    d+ +re +  +++ +D +g+G++sf Ef+++
  MMETSP1325-20131115|1474_1 200 QELFREWDEDRSGELSVAELEEGLNKLQVF--DGLTREDVHPLLESIDGDGNGTISFKEFMAF 260
                 689*************************88..****************************987 PP

  == domain 4    score: 40.0 bits;  conditional E-value: 1.7e-13
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64 
                 ++eaF ++D dgdg++++ee++  lk ++    ++ + ++++++++++D++gdG +s++Ef+ 
  MMETSP1325-20131115|1474_1 284 VQEAFGAFDGDGDGHVSVEEFETGLKSIQGF--EDVTSQEIQDLVGRFDLDGDGHVSLTEFAR 344
                 5789************************977..99999999********************85 PP

  == domain 5    score: 27.8 bits;  conditional E-value: 1.1e-09
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgsels......deevrevldyifkelDkngdGvlsfeEflqa 65 
                  F +lD d d +l+++eL+r lk  +s l       ++ +r+ + +++k++D++g+ ++s  Efl++
  MMETSP1325-20131115|1474_1 376 FFMKLDADADQHLSVDELERGLKSELSSLEqdggkfNDLTRNDVVDFVKRMDTDGNMRISQGEFLEF 442
                 5999**********************9999******66666666666*****************986 PP

  == domain 6    score: 9.8 bits;  conditional E-value: 0.00044
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgsels 34 
                  +F+++D+ ++g++ ++e++++l +lg  l 
  MMETSP1325-20131115|1474_1 560 SLFRAYDVERTGSVYRAEFVNVLMQLGLSLL 590
                 4699999999999999999999999997665 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0     6e-06      0.01       2      27 ..      20      45 ..      20      46 .. 0.91
   2 !   13.2   0.2   2.1e-05     0.036       2      26 ..      58      82 ..      57      84 .. 0.88
   3 !   17.3   0.0     1e-06    0.0018       2      29 .]     108     135 ..     107     135 .. 0.93
   4 !   17.0   0.0   1.3e-06    0.0022       2      29 .]     199     226 ..     198     226 .. 0.93
   5 !   18.2   0.2   5.4e-07   0.00092       8      27 ..     243     262 ..     240     264 .. 0.88
   6 !   23.4   0.0   1.2e-08   2.1e-05       2      28 ..     284     310 ..     283     311 .. 0.94
   7 !   16.3   0.0   2.2e-06    0.0038       1      26 [.     321     346 ..     321     348 .. 0.88
   8 !   10.1   0.0   0.00021      0.36       4      28 ..     375     399 ..     373     400 .. 0.92
   9 !    8.7   0.2   0.00059         1       5      25 ..     422     442 ..     418     444 .. 0.87
  10 ?   -1.7   0.0       1.2   2.1e+03      13      22 ..     445     454 ..     445     456 .. 0.87
  11 ?    4.4   0.0     0.014        23       2      28 ..     558     584 ..     557     585 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 6e-06
                HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealk 27
                l+++F+  D+Dg+G I++ E+++ l+
  MMETSP1325-20131115|1474_1 20 LEDVFATWDVDGSGDITLAELMKGLE 45
                6799******************9886 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 2.1e-05
                HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkeal 26
                ++++ k +DkDg+G Is+ E+ e++
  MMETSP1325-20131115|1474_1 58 ADRLLKNLDKDGSGDISLRELFEFV 82
                5788999**************9876 PP

  == domain 3    score: 17.3 bits;  conditional E-value: 1e-06
                 HHHHHHHHCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkkl 29 
                 l+ aF+  D Dg+G Is+ E+k+ l+kl
  MMETSP1325-20131115|1474_1 108 LETAFRTWDADGSGAISLGELKSGLTKL 135
                 6789********************9986 PP

  == domain 4    score: 17.0 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkkl 29 
                 ++e+F+e D D++G +s+ E+ e l+kl
  MMETSP1325-20131115|1474_1 199 VQELFREWDEDRSGELSVAELEEGLNKL 226
                 79*********************99875 PP

  == domain 5    score: 18.2 bits;  conditional E-value: 5.4e-07
                 HHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   8 efDkDgdGkIsfeEfkealk 27 
                  +D Dg+G+Isf+Ef+++l 
  MMETSP1325-20131115|1474_1 243 SIDGDGNGTISFKEFMAFLG 262
                 68***************986 PP

  == domain 6    score: 23.4 bits;  conditional E-value: 1.2e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++eaF  fD DgdG++s+eEf + lk+
  MMETSP1325-20131115|1474_1 284 VQEAFGAFDGDGDGHVSVEEFETGLKS 310
                 68*********************9997 PP

  == domain 7    score: 16.3 bits;  conditional E-value: 2.2e-06
                 HHHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkeal 26 
                 e++++   fD DgdG++s+ Ef ++l
  MMETSP1325-20131115|1474_1 321 EIQDLVGRFDLDGDGHVSLTEFARVL 346
                 67788889**************9987 PP

  == domain 8    score: 10.1 bits;  conditional E-value: 0.00021
                 HHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkealkk 28 
                 ++F ++D D d ++s++E+ + lk+
  MMETSP1325-20131115|1474_1 375 DFFMKLDADADQHLSVDELERGLKS 399
                 58******************99986 PP

  == domain 9    score: 8.7 bits;  conditional E-value: 0.00059
                 HHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfkea 25 
                 + k +D+Dg+ +Is  Ef+e+
  MMETSP1325-20131115|1474_1 422 FVKRMDTDGNMRISQGEFLEF 442
                 6689**************985 PP

  == domain 10    score: -1.7 bits;  conditional E-value: 1.2
                 TSSEBEHHHH CS
  PF00036.27  13 gdGkIsfeEf 22 
                 ++G Is eE 
  MMETSP1325-20131115|1474_1 445 KNGIISQEEV 454
                 79******96 PP

  == domain 11    score: 4.4 bits;  conditional E-value: 0.014
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++ +F+ +D+ ++G +   Ef+++l+ 
  MMETSP1325-20131115|1474_1 558 VESLFRAYDVERTGSVYRAEFVNVLMQ 584
                 6789************99999998875 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.7e-06    0.0063       2      31 .]      20      48 ..      20      48 .. 0.92
   2 !    8.0   0.4    0.0015       2.6       5      25 ..      61      81 ..      57      89 .. 0.84
   3 !   15.9   0.0   4.5e-06    0.0077       2      28 ..     108     134 ..     107     140 .. 0.89
   4 ?    2.8   0.0     0.072   1.2e+02       3      27 ..     149     173 ..     147     180 .. 0.83
   5 !   16.2   0.0   3.4e-06    0.0059       2      28 ..     199     225 ..     198     231 .. 0.89
   6 !   14.9   0.1   9.3e-06     0.016       9      28 ..     244     263 ..     240     270 .. 0.90
   7 !   19.7   0.0   2.6e-07   0.00044       3      27 ..     285     309 ..     283     313 .. 0.91
   8 !   14.8   0.0     1e-05     0.018       1      28 [.     321     348 ..     321     357 .. 0.89
   9 !   12.8   0.2   4.4e-05     0.076       4      27 ..     375     398 ..     372     408 .. 0.92
  10 !    5.8   0.0     0.008        14       4      24 ..     421     441 ..     418     447 .. 0.87
  11 !   11.9   0.0   8.8e-05      0.15       3      28 ..     559     584 ..     557     593 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 3.7e-06
                HH---GCC-------B---HHHHHHH.H-- CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrkslg 31
                l+++F   D dg+G i+++EL++ L  s+g
  MMETSP1325-20131115|1474_1 20 LEDVFATWDVDGSGDITLAELMKGLE-SWG 48
                5789********************99.876 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0015
                --GCC-------B---HHHHH CS
   PF13405.1  5 aFklfDkdgdGkidaeELrda 25
                + k +Dkdg+G i++ EL  +
  MMETSP1325-20131115|1474_1 61 LLKNLDKDGSGDISLRELFEF 81
                66889************9766 PP

  == domain 3    score: 15.9 bits;  conditional E-value: 4.5e-06
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 l+ aF+  D dg+G i++ EL++ L+k
  MMETSP1325-20131115|1474_1 108 LETAFRTWDADGSGAISLGELKSGLTK 134
                 5679*******************9985 PP

  == domain 4    score: 2.8 bits;  conditional E-value: 0.072
                 H---GCC-------B---HHHHHHH CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                 r++  ++  ++dG+++++ L+++  
  MMETSP1325-20131115|1474_1 149 RRLLSAIAGTQDGEVTLKSLMAFVG 173
                 6777788999**********99865 PP

  == domain 5    score: 16.2 bits;  conditional E-value: 3.4e-06
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 ++e+F+  D d++G+++ +EL   L+k
  MMETSP1325-20131115|1474_1 199 VQELFREWDEDRSGELSVAELEEGLNK 225
                 589******************999984 PP

  == domain 6    score: 14.9 bits;  conditional E-value: 9.3e-06
                 C-------B---HHHHHHH. CS
   PF13405.1   9 fDkdgdGkidaeELrdaLrk 28 
                 +D dg+G+i+++E++++L k
  MMETSP1325-20131115|1474_1 244 IDGDGNGTISFKEFMAFLGK 263
                 8****************985 PP

  == domain 7    score: 19.7 bits;  conditional E-value: 2.6e-07
                 H---GCC-------B---HHHHHHH CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                 +eaF +fD dgdG ++ eE+   L+
  MMETSP1325-20131115|1474_1 285 QEAFGAFDGDGDGHVSVEEFETGLK 309
                 89******************99998 PP

  == domain 8    score: 14.8 bits;  conditional E-value: 1e-05
                 HHH---GCC-------B---HHHHHHH. CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrdaLrk 28 
                 e++++   fD dgdG +++ E+ ++L +
  MMETSP1325-20131115|1474_1 321 EIQDLVGRFDLDGDGHVSLTEFARVLGQ 348
                 57788889*****************985 PP

  == domain 9    score: 12.8 bits;  conditional E-value: 4.4e-05
                 ---GCC-------B---HHHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                 ++F+++D d d  ++ +EL + L+
  MMETSP1325-20131115|1474_1 375 DFFMKLDADADQHLSVDELERGLK 398
                 69*******************999 PP

  == domain 10    score: 5.8 bits;  conditional E-value: 0.008
                 ---GCC-------B---HHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrd 24 
                 ++ k +D+dg+ +i++ E++ 
  MMETSP1325-20131115|1474_1 421 DFVKRMDTDGNMRISQGEFLE 441
                 677899************975 PP

  == domain 11    score: 11.9 bits;  conditional E-value: 8.8e-05
                 H---GCC-------B---HHHHHHH. CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLrk 28 
                 +++F+++D  ++G + ++E++++L +
  MMETSP1325-20131115|1474_1 559 ESLFRAYDVERTGSVYRAEFVNVLMQ 584
                 789********************995 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00047       0.8       1      23 [.      20      42 ..      20      44 .. 0.88
   2 !   11.1   0.5    0.0001      0.18       4      25 .]      61      82 ..      56      82 .. 0.86
   3 !   11.2   0.0   9.3e-05      0.16       2      23 ..     109     130 ..     108     133 .. 0.85
   4 !    8.9   0.0    0.0005      0.85       2      23 ..     200     221 ..     199     224 .. 0.89
   5 !   15.1   0.0   5.3e-06    0.0091       6      24 ..     242     260 ..     238     261 .. 0.89
   6 !   21.7   0.1   4.6e-08   7.9e-05       2      24 ..     285     308 ..     284     309 .. 0.88
   7 !   16.4   0.0   2.2e-06    0.0037       7      24 ..     328     345 ..     322     346 .. 0.84
   8 ?    2.4   0.3     0.058        99       3      24 ..     375     397 ..     375     398 .. 0.87
   9 ?   -1.6   0.1       1.1   1.8e+03       5      21 ..     423     439 ..     419     442 .. 0.67
  10 ?   -0.8   0.0      0.59     1e+03       2      21 ..     559     578 ..     558     582 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00047
                HHHHHHHH--S----B-HHHHHH CS
   PF13202.1  1 lkdtFrafDlNgDGkIsreELkr 23
                l+d+F   D++g+G I+  EL++
  MMETSP1325-20131115|1474_1 20 LEDVFATWDVDGSGDITLAELMK 42
                67889999*************76 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.0001
                HHHHH--S----B-HHHHHHHH CS
   PF13202.1  4 tFrafDlNgDGkIsreELkrlv 25
                +++ +D++g+G Is  EL ++v
  MMETSP1325-20131115|1474_1 61 LLKNLDKDGSGDISLRELFEFV 82
                67889*************8875 PP

  == domain 3    score: 11.2 bits;  conditional E-value: 9.3e-05
                 HHHHHHH--S----B-HHHHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreELkr 23 
                 + +Fr  D++g+G Is  ELk 
  MMETSP1325-20131115|1474_1 109 ETAFRTWDADGSGAISLGELKS 130
                 5569999*************86 PP

  == domain 4    score: 8.9 bits;  conditional E-value: 0.0005
                 HHHHHHH--S----B-HHHHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreELkr 23 
                 +++Fr+ D +++G +s  EL++
  MMETSP1325-20131115|1474_1 200 QELFREWDEDRSGELSVAELEE 221
                 679*****************87 PP

  == domain 5    score: 15.1 bits;  conditional E-value: 5.3e-06
                 HHH--S----B-HHHHHHH CS
   PF13202.1   6 rafDlNgDGkIsreELkrl 24 
                 + +D +g G+Is++E++++
  MMETSP1325-20131115|1474_1 242 ESIDGDGNGTISFKEFMAF 260
                 679*************997 PP

  == domain 6    score: 21.7 bits;  conditional E-value: 4.6e-08
                 HHHHHHH--S----B-HHHHHH.H CS
   PF13202.1   2 kdtFrafDlNgDGkIsreELkr.l 24 
                 +++F afD +gDG +s eE+++ l
  MMETSP1325-20131115|1474_1 285 QEAFGAFDGDGDGHVSVEEFETgL 308
                 667*****************9855 PP

  == domain 7    score: 16.4 bits;  conditional E-value: 2.2e-06
                 HH--S----B-HHHHHHH CS
   PF13202.1   7 afDlNgDGkIsreELkrl 24 
                 +fDl+gDG +s  E+ r+
  MMETSP1325-20131115|1474_1 328 RFDLDGDGHVSLTEFARV 345
                 7**************997 PP

  == domain 8    score: 2.4 bits;  conditional E-value: 0.058
                 HHHHHH--S----B-HHHHHH.H CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkr.l 24 
                 d+F ++D++ D  +s +EL+r l
  MMETSP1325-20131115|1474_1 375 DFFMKLDADADQHLSVDELERgL 397
                 67999******99******9855 PP

  == domain 9    score: -1.6 bits;  conditional E-value: 1.1
                 HHHH--S----B-HHHH CS
   PF13202.1   5 FrafDlNgDGkIsreEL 21 
                  +++D++g  +Is  E+
  MMETSP1325-20131115|1474_1 423 VKRMDTDGNMRISQGEF 439
                 57899999755555555 PP

  == domain 10    score: -0.8 bits;  conditional E-value: 0.59
                 HHHHHHH--S----B-HHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreEL 21 
                 +++Fra+D+ + G + r E+
  MMETSP1325-20131115|1474_1 559 ESLFRAYDVERTGSVYRAEF 578
                 679*****977777655555 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.5   0.00027      0.46       2      49 ..      32      80 ..      21      83 .. 0.89
   2 !    6.7   0.0    0.0029       4.9      28      52 ..     109     133 ..     106     135 .. 0.86
   3 ?    4.4   0.0     0.015        25       2      50 ..     120     171 ..     119     173 .. 0.90
   4 !    7.6   0.0    0.0015       2.6      26      46 ..     198     218 ..     159     225 .. 0.85
   5 !   17.4   0.1   1.3e-06    0.0022       3      51 ..     212     261 ..     212     262 .. 0.84
   6 !   10.1   0.2   0.00025      0.42      28      47 ..     285     304 ..     283     311 .. 0.85
   7 !   23.0   0.1   2.3e-08   3.9e-05      20      51 ..     315     346 ..     305     347 .. 0.84
   8 ?    1.2   0.1      0.15   2.6e+02      30      47 ..     376     393 ..     375     400 .. 0.88
   9 !    7.8   1.0    0.0013       2.2       6      50 ..     389     442 ..     384     446 .. 0.76
  10 ?    4.4   0.0     0.015        26      26      51 ..     557     582 ..     556     585 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00027
   PF13833.1  2 kGlItreeLkralallglkg......lseeevdilfrefDtdgdGkisfeEFcv 49
                +G It +eL++     gl++      +   ++d l++ +D dg+G is+ E  +
  MMETSP1325-20131115|1474_1 32 SGDITLAELMK-----GLESwgllrtMDRMDADRLLKNLDKDGSGDISLRELFE 80
                799********.....7777777779**********************988765 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0029
   PF13833.1  28 dilfrefDtdgdGkisfeEFcvlle 52 
                 ++ fr  D+dg+G+is+ E ++ l+
  MMETSP1325-20131115|1474_1 109 ETAFRTWDADGSGAISLGELKSGLT 133
                 6789999**********99988776 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.015
   PF13833.1   2 kGlItreeLkralallglkg...lseeevdilfrefDtdgdGkisfeEFcvl 50 
                 +G I+  eLk+ l++l+++    ++e +v+ l++++   +dG ++++  +++
  MMETSP1325-20131115|1474_1 120 SGAISLGELKSGLTKLHTNLfvnVTERDVRRLLSAIAGTQDGEVTLKSLMAF 171
                 699********998888888****************9999999999988775 PP

  == domain 4    score: 7.6 bits;  conditional E-value: 0.0015
   PF13833.1  26 evdilfrefDtdgdGkisfeE 46 
                 +v++lfre D d++G +s +E
  MMETSP1325-20131115|1474_1 198 TVQELFREWDEDRSGELSVAE 218
                 59****************998 PP

  == domain 5    score: 17.4 bits;  conditional E-value: 1.3e-06
   PF13833.1   3 GlItreeLkral.allglkglseeevdilfrefDtdgdGkisfeEFcvll 51 
                 G+++ +eL + l +l+  +gl+ e+v+ l+  +D dg+G isf+EF+++l
  MMETSP1325-20131115|1474_1 212 GELSVAELEEGLnKLQVFDGLTREDVHPLLESIDGDGNGTISFKEFMAFL 261
                 67788888887744445555***************************986 PP

  == domain 6    score: 10.1 bits;  conditional E-value: 0.00025
   PF13833.1  28 dilfrefDtdgdGkisfeEF 47 
                 ++ f +fD dgdG +s eEF
  MMETSP1325-20131115|1474_1 285 QEAFGAFDGDGDGHVSVEEF 304
                 677889************** PP

  == domain 7    score: 23.0 bits;  conditional E-value: 2.3e-08
   PF13833.1  20 kglseeevdilfrefDtdgdGkisfeEFcvll 51 
                 ++++ +e+++l+  fD+dgdG +s+ EF ++l
  MMETSP1325-20131115|1474_1 315 EDVTSQEIQDLVGRFDLDGDGHVSLTEFARVL 346
                 3499************************9875 PP

  == domain 8    score: 1.2 bits;  conditional E-value: 0.15
   PF13833.1  30 lfrefDtdgdGkisfeEF 47 
                  f ++D+d d  +s +E 
  MMETSP1325-20131115|1474_1 376 FFMKLDADADQHLSVDEL 393
                 5999***********995 PP

  == domain 9    score: 7.8 bits;  conditional E-value: 0.0013
   PF13833.1   6 treeLkralallglkg..............lseeevdilfrefDtdgdGkisfeEFcvl 50 
                 + +eL r     glk+              l+ ++v + ++ +Dtdg+ +is+ EF+++
  MMETSP1325-20131115|1474_1 389 SVDELER-----GLKSelssleqdggkfndLTRNDVVDFVKRMDTDGNMRISQGEFLEF 442
                 5666666.....444444445556788888999***********************987 PP

  == domain 10    score: 4.4 bits;  conditional E-value: 0.015
   PF13833.1  26 evdilfrefDtdgdGkisfeEFcvll 51 
                 +v+ lfr+ D ++ G +  +EF+++l
  MMETSP1325-20131115|1474_1 557 DVESLFRAYDVERTGSVYRAEFVNVL 582
                 5899*******************976 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0         8   1.4e+04      92     111 ..      22      41 ..       9      43 .. 0.67
   2 !    8.9   0.0   0.00077       1.3      47     111 ..     190     258 ..     124     259 .. 0.80
   3 ?    4.5   0.0     0.018        31      56     111 ..     284     343 ..     272     345 .. 0.78
   4 ?    5.0   0.1     0.013        21      60      88 ..     377     406 ..     376     441 .. 0.55

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 8
   PF10591.4  92 effksCDadkdkkisleEWc 111
                   f + D+d  ++i+l+E +
  MMETSP1325-20131115|1474_1  22 DVFATWDVDGSGDITLAELM 41 
                 45566677777777777755 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00077
   PF10591.4  47 knskeckeaveWkFnqlDtnkdkvlsksElaplrapl....vklehCikeffksCDadkdkkisleEWc 111
                 +  ++    v+  F ++D ++ + ls +El++  ++l       ++ ++++++s D d +++is++E++
  MMETSP1325-20131115|1474_1 190 QAEEKNGVTVQELFREWDEDRSGELSVAELEEGLNKLqvfdGLTREDVHPLLESIDGDGNGTISFKEFM 258
                 4445555667778*****************99877785444345667899*****************97 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.018
   PF10591.4  56 veWkFnqlDtnkdkvlsksElaplraplvklehC....ikeffksCDadkdkkisleEWc 111
                 v+  F  +D++ d+++s +E++   +++  +e      i+ ++ + D+d d+++sl E++
  MMETSP1325-20131115|1474_1 284 VQEAFGAFDGDGDGHVSVEEFETGLKSIQGFEDVtsqeIQDLVGRFDLDGDGHVSLTEFA 343
                 56679999**********9998877777666665111156688889************97 PP

  == domain 4    score: 5.0 bits;  conditional E-value: 0.013
   PF10591.4  60 FnqlDtnkdkvlsksElap.lraplvkleh 88 
                 F +lD ++d++ls  El+  l+++l +le+
  MMETSP1325-20131115|1474_1 377 FMKLDADADQHLSVDELERgLKSELSSLEQ 406
                 899*********996664325555544443 PP

>> PF09279.6  Phosphoinositide-specific phospholipase C, efhand-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       5.8   9.9e+03       1      25 [.     147     172 ..     147     175 .. 0.82
   2 !    7.9   0.0    0.0016       2.7       2      67 ..     199     261 ..     198     266 .. 0.90
   3 !    9.0   0.0   0.00071       1.2       2      65 ..     284     344 ..     283     348 .. 0.84
   4 ?   -3.2   0.0       4.5   7.7e+03       5      23 ..     376     395 ..     373     400 .. 0.71

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 5.8
                 HHHHHHHHH--.--SSEEHHHHHHHH CS
   PF09279.6   1 eieelfkeyse.nkevltaeeLrrFL 25 
                 ++++l+ ++++ +++ +t+++L+ F 
  MMETSP1325-20131115|1474_1 147 DVRRLLSAIAGtQDGEVTLKSLMAFV 172
                 678888889776899999****9996 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0016
                 HHHHHHHH--.--SSEEHHHHHHHHHHTS--TT---HHHHHHHHHH---HHHHHTTEE-----HHHH CS
   PF09279.6   2 ieelfkeyse.nkevltaeeLrrFLneeQkeerlteeeakaiiekyepneelkkkglLslegFlryL 67 
                 ++elf e +e + + l+++eL + Ln+ Q  + lt+e+++ ++e+ + +     +g +s+++F+ +L
  MMETSP1325-20131115|1474_1 199 VQELFREWDEdRSGELSVAELEEGLNKLQVFDGLTREDVHPLLESIDGDG----NGTISFKEFMAFL 261
                 799*****77699*******************************987666....6999999999998 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.00071
                 HHHHHHHH--.--SSEEHHHHHHHHHHTS--TT---HHHHHHHHHH---HHHHHTTEE-----HH CS
   PF09279.6   2 ieelfkeyse.nkevltaeeLrrFLneeQkeerlteeeakaiiekyepneelkkkglLslegFlr 65 
                 ++e f ++++ +++++++ee+   L+  Q+ e++t +e+++++ +++ +      g  sl +F r
  MMETSP1325-20131115|1474_1 284 VQEAFGAFDGdGDGHVSVEEFETGLKSIQGFEDVTSQEIQDLVGRFDLDGD----GHVSLTEFAR 344
                 6899999*6669**********************************98764....5555556655 PP

  == domain 4    score: -3.2 bits;  conditional E-value: 4.5
                 HHHHH--.--SSEEHHHHHH CS
   PF09279.6   5 lfkeyse.nkevltaeeLrr 23 
                  f ++++  +++l+++eL r
  MMETSP1325-20131115|1474_1 376 FFMKLDAdADQHLSVDELER 395
                 57777554789999999976 PP

>> PF12550.3  Transcriptional activator of glycolytic enzymes
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0    0.0001      0.17      10      33 ..     198     221 ..     193     226 .. 0.90
   2 ?    2.2   0.0     0.084   1.4e+02      24      68 ..     386     432 ..     382     441 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.0001
   PF12550.3  10 tVedlwrEwteglngqpsikslee 33 
                 tV++l rEw e   g+ s+ +lee
  MMETSP1325-20131115|1474_1 198 TVQELFREWDEDRSGELSVAELEE 221
                 9*********************98 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.084
   PF12550.3  24 gqpsiksleekygsrWrrdskerktfs..rRkriidfIerllkkkgi 68 
                 +  s+++le+  +s++++ +++   f+  +R+ ++df++r+ ++ ++
  MMETSP1325-20131115|1474_1 386 QHLSVDELERGLKSELSSLEQDGGKFNdlTRNDVVDFVKRMDTDGNM 432
                 6789*************9999999998556**********8766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.54u 0.36s 00:00:01.90 Elapsed: 00:00:00.88
# Mc/sec: 3098.93
//
Query:       MMETSP1325-20131115|1475_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.6e-05   21.9   4.5    0.00023   20.3   1.4    2.2  2  PF09851.4 Short C-terminal domain
     0.0026   17.4   0.0     0.0059   16.3   0.0    1.6  1  PF10256.4 Golgin subfamily A member 7/ERF4 family
  ------ inclusion threshold ------
       0.31   10.6   5.0       0.54    9.8   3.5    1.4  1  PF13630.1 SdpI/YhfL protein family


Domain annotation for each model (and alignments):
>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.035   1.6e+02      14      24 ..      38      48 ..      38      55 .. 0.84
   2 !   20.3   1.4   5.1e-08   0.00023       3      30 ..     267     294 ..     265     295 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.035
   PF09851.4 14 rGeIteEEFea 24
                +G+I++E F +
  MMETSP1325-20131115|1475_1 38 EGLISQESFHQ 48
                59*****9977 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 5.1e-08
   PF09851.4   3 daLekLkeLyarGeIteEEFeakKkkLL 30 
                 ++Le+L++++++G +t+ EF++ K  ++
  MMETSP1325-20131115|1475_1 267 EQLERLAAMKEKGMLTDKEFQELKSNIM 294
                 89**********************8775 PP

>> PF10256.4  Golgin subfamily A member 7/ERF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.3e-06    0.0059      22      73 ..      33      83 ..      27      99 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.3e-06
   PF10256.4 22 fPgeLegriseeefeeivnkiNkllkeafepisrrnlienilavltlylssl 73
                +P  Leg is+e f++ ++ +N+l++++ ep s+  ++ +  + + + ++  
  MMETSP1325-20131115|1475_1 33 YPAILEGLISQESFHQEIHALNELIASN-EPSSNDIVLMGAAQAIGGLVIIG 83
                9***********************9999.88888888777666666555555 PP

>> PF13630.1  SdpI/YhfL protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.5   0.00012      0.54      30      74 ..      76     123 ..      64     124 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00012
   PF13630.1  30 agkifiisGlillllgliililn...svillillllilviviisiiys 74 
                  g + ii+G+i ++++ + ++ n   +  +++++++++v ++i++i s
  MMETSP1325-20131115|1475_1  76 IGGLVIIGGFISFAMSGMNSVENqggMSSVMTPFIVFIVGMVIVMISS 123
                 4668899***********99988***9999999999999999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       766  (0.0560269); expected 273.4 (0.02)
Passed bias filter:                      557  (0.0407402); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 1466.57
//
Query:       MMETSP1325-20131115|1473_1  [L=355]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-64  215.4   6.0    1.2e-63  214.8   4.2    1.3  1  PF00112.18 Papain family cysteine protease
    5.3e-13   48.9   0.5    7.9e-13   48.3   0.4    1.3  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)
    4.3e-05   22.1   0.8      0.038   12.4   0.1    2.1  2  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.8   4.2   2.7e-67   1.2e-63       4     217 ..     132     350 ..     129     353 .. 0.87

  Alignments for each domain:
  == domain 1    score: 214.8 bits;  conditional E-value: 2.7e-67
                 B--CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-TTTS-TT----HHHHHHHHHHC---BBTTTS---SSC-...S--CCCC--C........CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-T..TG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEE CS
  PF00112.18   4 svDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCskeenegCnGGlmenafeyikknggivtekdypYkakeg..gkCkkkkkkek.......evakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecss..telnhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseav 217
                 s++w ++ g +tpvkdq+qCGsCWafsav+++e++++ +  ++++ +S q++v+C++ +++gC+GGl++nafey+k  +g++t+++ypY++ +g  g+Ck  +           +v +++++  + +++ +al++al++ngPvsva+dase+  ++Y +Gv+++++css  ++++hav++vGy+ + +++yWiv+NSW+++wGe+G+i+++ g n +cgi++ a 
  MMETSP1325-20131115|1473_1 132 SFNWADQ-GVLTPVKDQAQCGSCWAFSAVETIESAWIRAG-NDMTVFSPQQVVSCDS-TDNGCSGGLPTNAFEYVKGANGLATDESYPYTSGTGdsGTCKDFTVAGGtvsaygyAVPQCTKIFGTCDEDSDALASALQSNGPVSVALDASEW--SSYAGGVMTSSSCSSssRKMDHAVQLVGYNADADTPYWIVRNSWSASWGEEGFIYLKMGDN-TCGIANLAA 350
                 89****7.59******************************.69*************8.89******************************5555558888775443323333444444444444444489*********************5..9**********99987789****************************************77.****99765 PP

>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   0.4   1.7e-16   7.9e-13       1      58 []      42     102 ..      42     102 .. 0.94

  Alignments for each domain:
  == domain 1    score: 48.3 bits;  conditional E-value: 1.7e-16
   PF08246.7   1 FeswmdaygkkYrhsseinerfenFkeNlrqiqehN...anknvtftlglNkfsDlsheEf 58 
                 Fe+w++++gk+Y++++e+++r  nF+  +++++e+N   a +   +  gl++f+D ++eEf
  MMETSP1325-20131115|1473_1  42 FENWKAEHGKSYESEEEHMKRLLNFEATVERVAELNeklAAEGADMVHGLTRFADQTEEEF 102
                 9***********************************877677777899************9 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00015      0.66      57      77 ..     143     163 ..     113     177 .. 0.84
   2 !   12.4   0.1   8.3e-06     0.038     356     396 ..     297     335 ..     288     342 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00015
  PF03051.10  57 evtnqkqsGRCWlFaalnvlR 77 
                 +v +q q G CW F+a+ ++ 
  MMETSP1325-20131115|1473_1 143 PVKDQAQCGSCWAFSAVETIE 163
                 899**************9986 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 8.3e-06
  PF03051.10 356 eslmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfv 396
                 +  m+Ha+ l+g + d+  ++  w v nsW    Ge+G+  
  MMETSP1325-20131115|1473_1 297 SRKMDHAVQLVGYNADA--DTPYWIVRNSWSASWGEEGFIY 335
                 5679*********9954..4567***************854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.37s 00:00:01.06 Elapsed: 00:00:00.54
# Mc/sec: 1575.38
//
Query:       MMETSP1325-20131115|1477_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-18   64.1   0.0    8.7e-18   64.0   0.0    1.0  1  PF00107.21 Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> PF00107.21  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.0   0.0   6.4e-22   8.7e-18       2      86 ..       1      87 [.       1      89 [] 0.94

  Alignments for each domain:
  == domain 1    score: 64.0 bits;  conditional E-value: 6.4e-22
                ---HHHHHHHHH-.-EEEEEESSHHHHHHHHH----EEEETTTS-..HHHHHHHHTTT--BSEEEEET-.CTHHHHHHHCB-----EE CS
  PF00107.21  2 vGlaavqlAkalG.arviavdsseeklelakelGadhvinskded..fvkaireltggkgvdvviecvgagatfeqalkllapgGrvv 86
                vGla++q+Ak +G  r++a+d++ +k ++a+e+Ga++++n++d d  ++  +   t+  g+d+ ++c+g+ + +++al++ ++g  v 
  MMETSP1325-20131115|1477_1  1 VGLAVIQAAKERGaRRIFAIDINSKKFDMAREFGATDCLNPTDYDepIQSVLVGETQW-GIDYTFDCTGNTEVMRAALEASHRGWGVS 87
                8******************************************999888888888887.*********************99998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|1480_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.59
# Mc/sec: 438.66
//
Query:       MMETSP1325-20131115|1479_1  [L=398]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.2    8.4   3.4        1.9    7.7   2.3    1.3  1  PF09989.4 CoA enzyme activase uncharacterised domain (DUF2229)


Domain annotation for each model (and alignments):
>> PF09989.4  CoA enzyme activase uncharacterised domain (DUF2229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   2.3   0.00014       1.9     131     192 ..     271     333 ..     238     350 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00014
   PF09989.4 131 lakrlvelgkkl.giskeeikkAvekAleeqeefkedlkkkgeealelleeegkkgivllGrp 192
                  a +++++ k++ ++ ++ +k+A+++A  + +e++++ k++ ++ +++++e+++k + + + +
  MMETSP1325-20131115|1479_1 271 AASAALSMEKSVaKAARDAAKQAAKQAKMSAREVERQRKEEERQREKMIRENQRKSLSVYAFK 333
                 33333444333304577889999999999999****9************99999976665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1806  (0.132095); expected 273.4 (0.02)
Passed bias filter:                      726  (0.0531012); expected 273.4 (0.02)
Passed Vit filter:                       102  (0.0074605); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.97u 0.37s 00:00:01.34 Elapsed: 00:00:00.66
# Mc/sec: 1445.08
//
Query:       MMETSP1325-20131115|1478_1  [L=615]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.8e-21   74.6   0.6      5e-20   72.1   0.4    2.1  1  PF01734.17 Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> PF01734.17  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.1   0.4   3.7e-24     5e-20       1     203 [.     290     454 ..     290     455 .. 0.96

  Alignments for each domain:
  == domain 1    score: 72.1 bits;  conditional E-value: 3.7e-24
  PF01734.17   1 LvlsGGGtrGafslgalkaLkkelgdrfdiisGtSaGaiiaallalgrdpaalvedlrelllnkffdrdllirelaanlaarlsgllgpgglfdaealrellrkvlgdltlkrlsarlgklpllkslataaqavpaittataasastantanslyteddeddvpladavraSsafPglfppvsldgelyvDGGildNnPilaa 203
                 L+l+GGG+rG+++lg+++aL +e+g+ +d+++GtS Ga+++al+a ++ + + +e   + ++    + +           +++  +l   ++f+a+ +   +r+v+g+  +++l  +  ++                            t+   + e   ++++l+  vraS+++ g++pp + +++l+vDGG l+ +P++++
  MMETSP1325-20131115|1478_1 290 LTLGGGGARGLAHLGVIQAL-EEAGIVVDMVGGTSQGAFVSALYARYPHDSRKREMVSREFSVEMGSTW----------SKLIDLTLPIVSYFSASRFNFGIRRVFGSTRIQDLWLPYHCV---------------------------STDIMNNKEVVHTKGSLWKSVRASMTLAGFLPPIWEGDRLLVDGGYLNVLPADVM 454
                 89******************.**************************9999999998888888888888..........9*****************************************...........................899************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.98u 0.33s 00:00:01.31 Elapsed: 00:00:01.22
# Mc/sec: 1208.00
//
Query:       MMETSP1325-20131115|1476_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.8e-10   39.2  61.6    0.00048   20.0   5.2    5.5  5  PF07974.8 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   7.2     3e-05      0.42       1      27 [.      21      43 ..      21      44 .. 0.87
   2 !   17.9   6.5   1.6e-07    0.0022       7      32 .]      79     104 ..      74     104 .. 0.95
   3 !    9.9   2.5   5.4e-05      0.74       1      15 [.     109     120 ..     109     121 .. 0.87
   4 !    3.6   0.4     0.005        69      21      32 .]     169     180 ..     165     180 .. 0.90
   5 !   20.0   5.2   3.5e-08   0.00048       5      32 .]     369     396 ..     364     396 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 3e-05
   PF07974.8  1 CsadgliCgghGtCvkqcgkCvCdsgy 27
                C++    C+ghGtC ++  +C C++++
  MMETSP1325-20131115|1476_1 21 CPN---ACSGHGTCGED-DVCFCYQNW 43
                985...4********98.47*****99 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 1.6e-07
   PF07974.8   7 iCgghGtCvkqcgkCvCdsgyqGktC 32 
                 +C+g G+C+++ g C+C +gy Gk C
  MMETSP1325-20131115|1476_1  79 ECSGKGICDRSSGECECFDGYGGKGC 104
                 5**********99***********99 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 5.4e-05
   PF07974.8   1 CsadgliCgghGtCv 15 
                 C++d   C+ghGtC+
  MMETSP1325-20131115|1476_1 109 CPND---CSGHGTCE 120
                 9964...*******7 PP

  == domain 4    score: 3.6 bits;  conditional E-value: 0.005
   PF07974.8  21 CvCdsgyqGktC 32 
                 CvCd gy   +C
  MMETSP1325-20131115|1476_1 169 CVCDPGYIDVDC 180
                 *******98888 PP

  == domain 5    score: 20.0 bits;  conditional E-value: 3.5e-08
   PF07974.8   5 gliCgghGtCvkqcgkCvCdsgyqGktC 32 
                 + +Cg +G+C+ + g+C+C  gy+G  C
  MMETSP1325-20131115|1476_1 369 NYECGRRGKCDYDSGICECFEGYTGLAC 396
                 357********88************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1694.27
//
Query:       MMETSP1325-20131115|1483_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-11   44.0   2.4    1.6e-11   43.5   1.7    1.2  1  PF02209.14 Villin headpiece domain


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   1.7   1.2e-15   1.6e-11       1      36 []     138     173 ..     138     173 .. 0.98

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 1.2e-15
                 GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT-- CS
  PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgLF 36 
                 YL+d +F +vF+ +ke+F k P+W+q  lKk   +F
  MMETSP1325-20131115|1483_1 138 YLTDVEFTKVFNVSKEAFSKFPKWRQTTLKKNTAFF 173
                 9******************************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1018.45
//
Query:       MMETSP1325-20131115|1482_1  [L=407]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-44  150.4   0.1    7.1e-44  149.0   0.0    1.7  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    2.5e-08   33.6   0.1      1e-07   31.6   0.1    2.1  1  PF07728.9  AAA domain (dynein-related subfamily)
    5.8e-08   32.7   0.5    1.7e-07   31.2   0.0    2.0  2  PF07724.9  AAA domain (Cdc48 subfamily)
    2.7e-05   24.1   0.8     0.0088   16.0   0.2    2.8  1  PF13401.1  AAA domain
    0.00017   20.4   0.1    0.00038   19.3   0.0    1.6  2  PF05673.8  Protein of unknown function (DUF815)
     0.0003   19.5   0.0     0.0013   17.3   0.0    2.1  2  PF06068.8  TIP49 C-terminus
    0.00044   19.8   0.1      0.015   14.8   0.0    2.2  2  PF13086.1  AAA domain
    0.00047   19.1   0.0     0.0014   17.5   0.0    1.8  2  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    0.00076   20.1   0.0      0.012   16.3   0.0    2.4  2  PF13207.1  AAA domain
     0.0011   18.0   0.1     0.0024   16.9   0.0    1.6  1  PF01078.16 Magnesium chelatase, subunit ChlI
     0.0016   18.2   0.1      0.032   13.9   0.0    2.2  2  PF13173.1  AAA domain
     0.0017   17.8   0.0      0.006   16.0   0.0    2.0  2  PF13604.1  AAA domain
     0.0025   17.1   0.0       0.22   10.8   0.0    2.5  2  PF00158.21 Sigma-54 interaction domain
     0.0029   17.6   0.0     0.0097   15.9   0.0    1.9  1  PF00910.17 RNA helicase
      0.003   16.2   0.0     0.0083   14.8   0.0    1.7  2  PF03969.11 AFG1-like ATPase
     0.0044   16.8   0.0      0.012   15.4   0.0    1.9  1  PF13671.1  AAA domain
     0.0061   15.8   0.0       0.02   14.1   0.0    1.8  1  PF01695.12 IstB-like ATP binding protein
     0.0069   16.5   0.0      0.032   14.4   0.0    2.2  2  PF13238.1  AAA domain
     0.0071   15.9   0.0      0.018   14.6   0.0    1.7  1  PF13245.1  Part of AAA domain
     0.0092   14.9   0.0      0.018   14.0   0.0    1.4  1  PF06414.7  Zeta toxin
  ------ inclusion threshold ------
      0.012   14.6   0.0      0.027   13.5   0.0    1.5  1  PF01745.11 Isopentenyl transferase
      0.013   15.7   0.2       0.15   12.2   0.0    2.2  2  PF13191.1  AAA ATPase domain
       0.02   14.7   0.0      0.043   13.6   0.0    1.6  1  PF13521.1  AAA domain
      0.025   13.3   0.0      0.046   12.4   0.0    1.3  1  PF01057.12 Parvovirus non-structural protein NS1
      0.031   13.7   0.6       0.61    9.5   0.1    2.5  2  PF05729.7  NACHT domain
      0.037   12.9   0.9       0.83    8.5   0.0    2.8  3  PF06745.8  KaiC
      0.049   13.1   0.1       0.28   10.6   0.0    2.3  2  PF07726.6  ATPase family associated with various cellular activities (AAA)
       0.05   12.7   0.5      0.098   11.7   0.4    1.4  1  PF11932.3  Protein of unknown function (DUF3450)
      0.068   12.4   1.9       0.51    9.5   0.1    2.4  2  PF13481.1  AAA domain
       0.08   12.5   0.0        0.2   11.2   0.0    1.8  1  PF03266.10 NTPase
       0.24   10.8   5.3        0.4   10.1   0.4    2.5  3  PF01025.14 GrpE


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.0   0.0   1.6e-46   7.1e-44       1     131 [.     191     323 ..     191     324 .. 0.97

  Alignments for each domain:
  == domain 1    score: 149.0 bits;  conditional E-value: 1.6e-46
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 vl++GppGtGKT++akava+ ++++f+++ gse+++ky+ge+++ +r++f+ a+e+a psi+fiDEida+a++r   ++++++e +r++ +Ll+++dg++++ + v vi+atnr d+ldpallr gR+drkie++
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANATSASFISMVGSEFVQKYLGEGPRMVRDVFRLARENA-PSIIFIDEIDAIATKRfdaQTGADREVQRILLELLNQMDGFDQSVN-VKVIMATNRADTLDPALLRpGRLDRKIEFP 323
                 799*****************************************************9.****************99888899999****************866.****************************98 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.1   2.4e-10     1e-07       1     137 [.     190     312 ..     190     313 .. 0.84

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 2.4e-10
                 EEEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------..G-SEEEEESGGG---HHHHHHHHHHHSSEEE..----EEE---.......-EEEEE-SS--.-TT-TTHHHHT CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrlllpeggelvkaknddlleknfrviatanpldrslnelspalrs 137
                 +vl+ GppGtgK+++a+ +a a+ +++  + ++++ ++    g+r +           + r ar   ++i+++DE++ + ++ +++      e ++ l e+ ++++       + n+ vi+++n++d     l+pal++
  MMETSP1325-20131115|1482_1 190 GVLMWGPPGTGKTMMAKAVANATSASFISMVGSEFVQKYLGEGPRMV---------RDVFRLARenAPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD---QSVNVKVIMATNRAD----TLDPALLR 312
                 599******************************98888888888887.........666777776789*******************9987777777667666665544...2579***********....88888875 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       8.4   3.7e+03      32      61 ..      39      68 ..      16      75 .. 0.62
   2 !   31.2   0.0   3.8e-10   1.7e-07       6     105 ..     191     284 ..     186     301 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 8.4
                ..--EEEEGGG-------THHHHHHHHHTT CS
   PF07724.9 32 ekkliradaselleeeevehlvsrligapp 61
                +k+l  +d +e   ++e+++l  +li a++
  MMETSP1325-20131115|1482_1 39 QKQLEFFDIQEEYIKDEMKNLKRELIRAKD 68
                455566666665556666666666666655 PP

  == domain 2    score: 31.2 bits;  conditional E-value: 3.8e-10
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--..-EEEETGGG----------------HHHHHHHH-- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqileg 105
                 +l+ gp g+Gkt++aka+a+  ++    ++i +  se+ +    + l +     ++    a e+   i+++DEid i+ k+   +     +Vqr+LL +l +
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANATSA----SFISMVGSEFVQ----KYLGEGPRMVRDVFRLARENApsIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 284
                 6899******************96....99999999**99....88888888888888888888889************966666666679*******9975 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2     2e-05    0.0088       7     114 ..     191     289 ..     185     306 .. 0.57

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2e-05
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapastspkellqkllsalglpakgrltteellealqealrrrrtrlliiDEaqrL.......s....eealeelrslldd....e 114
                 ++  G++G+GKT+ ++ +a+                        + ++ +++ s++ ++  g  +  ++++ + + +r+++  ++ iDE++ +       +     e+   l  ll++    +
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANAT----------------------SASFISMVGSEFVQKYLG--EGPRMVRDVFRLARENAPSIIFIDEIDAIatkrfdaQtgadREVQRILLELLNQmdgfD 289
                 5678***************953......................333333333333333333..33446666777777777777777777776555444314454444444444444444453 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1         8   3.5e+03     196     221 ..      40      65 ..      31      68 .. 0.64
   2 !   19.3   0.0   8.6e-07   0.00038      22     116 ..     148     256 ..     135     286 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 8
   PF05673.8 196 dqdeYleivkklakklglelekeelr 221
                 +q e+++i ++++k+   +l++e +r
  MMETSP1325-20131115|1482_1  40 KQLEFFDIQEEYIKDEMKNLKRELIR 65 
                 45578888888887777777666555 PP

  == domain 2    score: 19.3 bits;  conditional E-value: 8.6e-07
   PF05673.8  22 vdkvelddLvgiekqkeallente....qf.....lkglpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkdlpkivellr...erperfilfvDDL 116
                    v+++d+ g + qk+++ e +e    qf     +   p + vL+wG  GtGK  + ka+ n+++++ + ++  e  ++ l + p++v+ +    +++   i+f+D +
  MMETSP1325-20131115|1482_1 148 KPDVKYSDIGGNDIQKQEVREAVElpltQFqlykqIGIDPPRGVLMWGPPGTGKTMMAKAVANATSASFISMVgsEFVQKYLGEGPRMVRDVFrlaRENAPSIIFIDEI 256
                 5566666777777777666665542222221111122246788*****************************977788999***9999987642226778899**9975 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0     3e-06    0.0013      50      89 ..     188     225 ..     144     243 .. 0.81
   2 ?   -2.0   0.0       2.2   9.6e+02     143     205 ..     330     394 ..     311     399 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 3e-06
   PF06068.8  50 GravLlaGppgtGktalaiaiskelgedvpfvalsgsevy 89 
                  r+vL+ GppgtGkt +a a++++ +    f++++gse+ 
  MMETSP1325-20131115|1482_1 188 PRGVLMWGPPGTGKTMMAKAVANATS--ASFISMVGSEFV 225
                 499*******************9876..78*******975 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 2.2
   PF06068.8 143 vkitlkttkeekklklgskiieelqk.ekvkegDvivieketG.kvkklGrsearakefDiekde 205
                  +++l++   + ++  +  + + +++ ek+++ D+ +i +e+G +  +  r    +k+fDi+ ++
  MMETSP1325-20131115|1482_1 330 KRMVLQACCAKMNVGEEVDLEDYVNRpEKISAADLSAICAEAGlQAVRENRYVVLSKDFDIAYKK 394
                 55555555555555555556666665489999999999999995566788888999999996655 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1      0.12        54     120     183 ..      26      98 ..       5     113 .. 0.66
   2 !   14.8   0.0   3.4e-05     0.015      19      94 ..     190     303 ..     159     400 .. 0.74

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.12
   PF13086.1 120 allkeiseeleelkeklekekkklkqekeklkkeskklkkeleearekie............keileeae.vvcaTl 183
                 +  +++  + ++l++    + +  + ++e +k+e k+lk+el +a+++i+             e+++e++ +v++T 
  MMETSP1325-20131115|1482_1  26 QAEEDLYVKYKTLQK----QLEFFDIQEEYIKDEMKNLKRELIRAKDEIKriqsvplvigqfSEMVDEHHgIVMSTA 98 
                 233333333333333....5567777888888888888888888888888888888888888777777663666664 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 3.4e-05
   PF13086.1  19 itliqGpPgtGKt...ttivelisql.........lsek...........................seseakkkkrvLvcapsnaavDeilerlle.ldeegkkynpkivRignea 94 
                   l++GpPgtGKt   + ++ + s+          +  +                            e +a ++kr  + +    +v  il+ ll+ +d   ++ n+k++   n+a
  MMETSP1325-20131115|1482_1 190 GVLMWGPPGTGKTmmaKAVANATSASfismvgsefV--QkylgegprmvrdvfrlarenapsiifiDEIDAIATKRFDAQTGADREVQRILLELLNqMDGFDQSVNVKVIMATNRA 303
                 579**********55533333333334444455551..044555555555566666666777777777888888888888888888888888888877777788888887777776 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   3.2e-06    0.0014      52     113 ..     190     259 ..     161     273 .. 0.70
   2 ?   -2.3   0.0       3.8   1.7e+03      32      55 ..     288     311 ..     257     315 .. 0.73

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 3.2e-06
   PF05496.7  52 hvllyGpPGlGkttlakiiakelgvelkvtsgP.vleka.gd...laalltnl...eekdvlfideihrl 113
                  vl+ GpPG Gkt +ak +a+   +++ +  g   ++k  g+   ++  + +l   ++  ++fidei  +
  MMETSP1325-20131115|1482_1 190 GVLMWGPPGTGKTMMAKAVANATSASFISMVGSeFVQKYlGEgprMVRDVFRLareNAPSIIFIDEIDAI 259
                 59*******************9999876554441455432221113332233311144568888888766 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 3.8
   PF05496.7  32 vkeklkifieaakkreealdhvll 55 
                   +++++ +  a +r ++ld  ll
  MMETSP1325-20131115|1482_1 288 FDQSVNVKVIMATNRADTLDPALL 311
                 556788888889999999998887 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0       1.4   6.3e+02      44      67 ..      39      66 ..      21     133 .. 0.69
   2 !   16.3   0.0   2.6e-05     0.012       6      67 ..     195     271 ..     191     333 .. 0.54

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 1.4
                ---B--SSGGGB-HHHHHHHH....... CS
   PF13207.1 44 dgereskdadadllaaildglaa....k 67
                +  +e++d+ ++++++++++l++     
  MMETSP1325-20131115|1482_1 39 QKQLEFFDIQEEYIKDEMKNLKRelirA 66
                3334678888888888888885533331 PP

  == domain 2    score: 16.3 bits;  conditional E-value: 2.6e-05
                 --TT---HHHHHHHHHHSTEEEEEGGG..B-.........-GGGS-B-----B--..SSGGGB-HHHHHHHH........ CS
   PF13207.1   6 GppGsGKsTlakeLaerlglpvlsldd..ll.........reeglkelddgeres..kdadadllaaildglaa.....k 67 
                 GppG+GK+  ak++a++     +s+    ++          ++++  l ++       ++ +d+++ai+ +  +      
  MMETSP1325-20131115|1482_1 195 GPPGTGKTMMAKAVANATSASFISMVGseFVqkylgegprMVRDVFRLARE---NapSIIFIDEIDAIATKRFDaqtgaD 271
                 9****************9988888777544344432222222222222222...12357777777777666644333331 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   5.4e-06    0.0024      25      43 ..     191     209 ..     182     225 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 5.4e-06
  PF01078.16  25 lllvGppGsGKtmlakrlp 43 
                 +l+ GppG+GKtm+ak+++
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVA 209
                 89**************986 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.47   2.1e+02      30      85 ..      28      85 ..      17     112 .. 0.59
   2 !   13.9   0.0   7.3e-05     0.032       5      74 ..     191     268 ..     188     306 .. 0.65

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.47
   PF13173.1 30 esilyinlddeelrkladpe.llelfleklke..kkkylflDEiqevpewedalkslvd 85
                e+ ly++ ++ +  +l+ ++  +e++ +++k+  ++ +   DEi++++++  ++ ++ +
  MMETSP1325-20131115|1482_1 28 EEDLYVKYKTLQK-QLEFFDiQEEYIKDEMKNlkRELIRAKDEIKRIQSVPLVIGQFSE 85
                5556666666444.233344233555555444645566788999998888777776665 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 7.3e-05
   PF13173.1   5 lvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe...llelflek.lkekkkylflDEiqev........p 74 
                 +++ Gp ++GKt+++k +a+      s++ +   +  + ++   e   + + ++++  ++  +++f+DEi  +         
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANATS--ASFISMVGSE--FVQKYLGEgprMVRDVFRLaRENAPSIIFIDEIDAIatkrfdaqT 268
                 6778***********99996666..5555554444..433221122344444444425568899******998555555551 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.7   1.2e+03      47      84 ..      12      49 ..       2     117 .. 0.71
   2 !   16.0   0.0   1.3e-05     0.006       6      45 ..     176     215 ..     171     262 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 2.7
   PF13604.1 47 krvvglAptgkaakvLeeelgiearTiasllerldkee 84
                + v + +p  k  k+ ee+l ++ +T+++ le  d +e
  MMETSP1325-20131115|1482_1 12 MDVEATTPMDKSDKQAEEDLYVKYKTLQKQLEFFDIQE 49
                56778888888888888888888888888777666544 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 1.3e-05
   PF13604.1   6 QkeaveavltsgdrvavvqGpAGtGKttvlkalrealeaa 45 
                 Q ++ +++  ++ r +++ Gp+GtGKt + ka+++a +a+
  MMETSP1325-20131115|1482_1 176 QFQLYKQIGIDPPRGVLMWGPPGTGKTMMAKAVANATSAS 215
                 7777777777777777788****************99885 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0    0.0005      0.22      23      47 ..     189     213 ..     171     229 .. 0.80
   2 ?    3.5   0.0     0.086        38      95     143 ..     249     302 ..     240     310 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.0005
                 S-EEEE-------HHHHHHHHHTST CS
  PF00158.21  23 ltvlitGesGtGKellAraiheask 47 
                   vl+ G  GtGK+++A+a+ +a++
  MMETSP1325-20131115|1482_1 189 RGVLMWGPPGTGKTMMAKAVANATS 213
                 679****************988655 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.086
                 --EEEET-----H...HHHHHHHHHHH---BE------..EB-----EEEE-SS CS
  PF00158.21  95 GtLfLDeigelpl...elQekLlrvlqegeverlGsek..eikvdvriiaatne 143
                 +++f+Dei  + +   ++Q+   r +q+  +e l + +   ++v+v++i+atn+
  MMETSP1325-20131115|1482_1 249 SIIFIDEIDAIATkrfDAQTGADREVQRILLELLNQMDgfDQSVNVKVIMATNR 302
                 57888888877641114677777777777777777654336899********97 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.2e-05    0.0097       1      76 [.     191     258 ..     191     273 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.2e-05
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdeenps.dlaelirl 76 
                 ++++Gp+g+GK+++ak +a+a +           ++  + ++f+++Y g+   ++ D+ +   e+ ps ++ + i +
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANATS---------ASFISMVGSEFVQKYLGEGPRMVRDVFRLARENAPSiIFIDEIDA 258
                 5799*************554444.........333458899999999999999999999888776666555555555 PP

>> PF03969.11  AFG1-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.9e-05    0.0083      35      79 ..     159     205 ..     135     227 .. 0.74
   2 ?   -3.2   0.0       5.6   2.5e+03     264     284 ..     366     386 ..     328     389 .. 0.51

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.9e-05
  PF03969.11  35 elaaaelvrqas.aalgklfgrkr.saepvrglYlwGgvGrGKtyLl 79 
                 ++ ++++vr+a+   l ++   k+    p+rg+ +wG+ G GKt++ 
  MMETSP1325-20131115|1482_1 159 NDIQKQEVREAVeLPLTQFQLYKQiGIDPPRGVLMWGPPGTGKTMMA 205
                 4555666677776445555556666899****************964 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 5.6
  PF03969.11 264 fsfaelceaarsqsdylalae 284
                 +  ae+ ++a+ +++y+ l++
  MMETSP1325-20131115|1482_1 366 AICAEAGLQAVRENRYVVLSK 386
                 223444455555555555555 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.7e-05     0.012       2      29 ..     191     218 ..     191     284 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 2.7e-05
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrls 29 
                 vl+ G+pG+GK+  a+++++++ + ++s
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANATSASFIS 218
                 79*****************998876655 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   4.6e-05      0.02      48      70 ..     189     211 ..     175     221 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.6e-05
  PF01695.12  48 enlvllGpsGvGKthlAialgve 70 
                 + +++ Gp+G+GKt +A a++ +
  MMETSP1325-20131115|1482_1 189 RGVLMWGPPGTGKTMMAKAVANA 211
                 57999************999865 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1         5   2.2e+03      51      68 ..      51      68 ..      25     114 .. 0.52
   2 !   14.4   0.0   7.2e-05     0.032       5      69 ..     195     289 ..     191     402 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 5
   PF13238.1 51 ldedkldelldkleenes 68
                 ++d +++l ++l++ ++
  MMETSP1325-20131115|1482_1 51 YIKDEMKNLKRELIRAKD 68
                222222222222222222 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 7.2e-05
   PF13238.1   5 GtpGvGKtTlakeLaerl...........................gdvlrdlakengleeevddk..idtkeskeldedkldelldkleenes.e 69 
                 G+pG+GKt  ak+ a+ +                               r++a++  +++e+d    + ++ +  +d++++ +ll+ l++ +  +
  MMETSP1325-20131115|1482_1 195 GPPGTGKTMMAKAVANATsasfismvgsefvqkylgegprmvrdvFRLARENAPSIIFIDEIDAIatKRFDAQTGADREVQRILLELLNQMDGfD 289
                 9**************99888899999999999999999***999999999999999999999999887778888888888888888888877752 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   4.1e-05     0.018      10      34 ..     189     211 ..     182     227 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 4.1e-05
   PF13245.1  10 npllvvtGgPGtGKTttlaaiiaal 34 
                 +++l+  G+PGtGKT   a+++a +
  MMETSP1325-20131115|1482_1 189 RGVLM-WGPPGTGKT-MMAKAVANA 211
                 55666.8********.888777765 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0     4e-05     0.018      16      49 ..     188     220 ..     181     239 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 4e-05
   PF06414.7  16 pkavllgGqpGAGKtslaellleelaagnivrid 49 
                 p+ vl+ G+pG GKt +a+++ +++ + +++   
  MMETSP1325-20131115|1482_1 188 PRGVLMWGPPGTGKTMMAKAVANAT-SASFISMV 220
                 899********************98.77777665 PP

>> PF01745.11  Isopentenyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.1e-05     0.027       5      32 ..     192     219 ..     189     228 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.1e-05
  PF01745.11   5 lifGatttGKtaeaiklaketgapvivl 32 
                 l++G+ +tGKt +a ++a++t+a+ i++
  MMETSP1325-20131115|1482_1 192 LMWGPPGTGKTMMAKAVANATSASFISM 219
                 89*********************99985 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00035      0.15      23      46 ..     187     211 ..     174     242 .. 0.79
   2 ?    0.6   0.1       1.3   5.9e+02     125     158 ..     243     285 ..     221     297 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00035
   PF13191.1  23 sp.lllvtGpsGiGKSsLlrelakp 46 
                  p  +l  Gp+G+GK+ +++++a +
  MMETSP1325-20131115|1482_1 187 PPrGVLMWGPPGTGKTMMAKAVANA 211
                 44589****************6654 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 1.3
   PF13191.1 125 lartrrpklvlvlDD...........lqwadresldlLeallerl 158
                 +++++  + ++++D+              adre +  L++ll+++
  MMETSP1325-20131115|1482_1 243 ARENA--PSIIFIDEidaiatkrfdaQTGADREVQRILLELLNQM 285
                 44444..47999997668888888878888888889999998884 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   9.7e-05     0.043       3      49 ..     192     239 ..     190     275 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 9.7e-05
   PF13521.1   3 vitGgpstGKTtlleaLaar.gypvvpEvarevleeklakgeealpwe 49 
                  + G+p+tGKT  ++a+a+    + +  v+ e++++ l++g ++ +++
  MMETSP1325-20131115|1482_1 192 LMWGPPGTGKTMMAKAVANAtSASFISMVGSEFVQKYLGEGPRMVRDV 239
                 678***************764566667777777766666665555544 PP

>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0    0.0001     0.046     117     138 ..     191     212 ..     185     216 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.0001
  PF01057.12 117 vwfyGpantGktnlaeaIakav 138
                 v+++Gp+ tGkt++a+a a+a+
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANAT 212
                 899****************996 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1    0.0014      0.61       3      24 ..     191     212 ..     189     225 .. 0.88
   2 ?    2.1   0.0      0.27   1.2e+02      69     116 ..     236     284 ..     219     306 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0014
   PF05729.7   3 vilqGeaGsGKTtLlqklasaw 24 
                 v++ G++G GKT++++ +a+a 
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANAT 212
                 7889*************99875 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.27
   PF05729.7  69 vsevwivllelperlLlilDglDelvsdlgq..lkekqpvrtlLselirk 116
                 v+ v+ +  e+++++ +++D +D ++++         ++v+++L el+++
  MMETSP1325-20131115|1482_1 236 VRDVFRLARENAPSI-IFIDEIDAIATKRFDaqTGADREVQRILLELLNQ 284
                 455444444455554.6679999999854445566788999999999986 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.41   1.8e+02      80     116 ..      41      72 ..      18     106 .. 0.69
   2 ?    8.5   0.0    0.0019      0.83      15      37 ..     184     206 ..     175     215 .. 0.85
   3 ?   -0.5   0.0       1.1   4.8e+02     109     149 ..     241     285 ..     230     294 .. 0.59

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.41
   PF06745.8  80 egklaiidasesaeeeaeedleelieklaeaikeika 116
                 +  l + d+ e+ +   ++++++l+++l +a +eik 
  MMETSP1325-20131115|1482_1  41 Q--LEFFDIQEEYI---KDEMKNLKRELIRAKDEIKR 72 
                 3..55555555544...67777777777777666654 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0019
   PF06745.8  15 GipegrvvlitGepGtGKtifal 37 
                 Gi   r vl+ G pGtGKt++a+
  MMETSP1325-20131115|1482_1 184 GIDPPRGVLMWGPPGTGKTMMAK 206
                 666778899************97 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 1.1
   PF06745.8 109 eaikeikakrvviDsitgl....yeekeavaReilrqlvrvlkkl 149
                 +  +e   + + iD i+++      +++   Re  r l++ l+++
  MMETSP1325-20131115|1482_1 241 RLARENAPSIIFIDEIDAIatkrFDAQTGADREVQRILLELLNQM 285
                 555666677888999999875442333333344444444444443 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       4.1   1.8e+03      29      52 ..     144     167 ..     129     176 .. 0.75
   2 ?   10.6   0.0   0.00063      0.28       2      27 ..     191     216 ..     190     222 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 4.1
   PF07726.6  29 riqftpdllPsdilGtevyeekek 52 
                  +   pd+  sdi G ++ +++ +
  MMETSP1325-20131115|1482_1 144 LMTEKPDVKYSDIGGNDIQKQEVR 167
                 444569999999999999888765 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00063
   PF07726.6   2 vllegvPGlaktllvkalakaldlef 27 
                 vl+ g PG++kt+++ka+a+a +++f
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANATSASF 216
                 79999***************999887 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.4   0.00022     0.098      43     100 ..      18      76 ..       2      95 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00022
   PF11932.3  43 kkidkladqt.qellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieet 100
                 + +dk+++q+ ++l  ++++lq+++e  +++++ ++++++n ++el   +++i++i+ +
  MMETSP1325-20131115|1482_1  18 TPMDKSDKQAeEDLYVKYKTLQKQLEFFDIQEEYIKDEMKNLKRELIRAKDEIKRIQSV 76 
                 5567777665157889****************************************976 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1    0.0012      0.51      36      58 ..     191     213 ..     179     234 .. 0.83
   2 ?    1.7   0.1      0.29   1.3e+02     130     170 ..     236     276 ..     216     288 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0012
   PF13481.1  36 tllaGapgtGKStlalqlaaava 58 
                 +l +G+pgtGK+++a + a a +
  MMETSP1325-20131115|1482_1 191 VLMWGPPGTGKTMMAKAVANATS 213
                 5789***********99987765 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.29
   PF13481.1 130 lerllaaieelegpdlvviDtlsrlvggdensnsdv.gavia 170
                 ++++ ++++e + p+++ iD +++++    ++++++ ++v +
  MMETSP1325-20131115|1482_1 236 VRDVFRLARE-NAPSIIFIDEIDAIATKRFDAQTGAdREVQR 276
                 6788999999.88**********9999988888887555544 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00046       0.2       4      91 ..     193     284 ..     190     297 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00046
                 EE-------HHHHHHHHHH-...---EE--.EEE-----------EEE--.---EEE---TT...---SS--------HHHHHHHHHHHHHH CS
  PF03266.10   4 iTGepgvGKtTlvkkvlellksegvkvgGf.yteevreggrrigfdivdlasgergilarvk...gkreprvgkyvvnleefeelalpalrn 91 
                 + G+pg+GKt + k v+++ +++ +++ G   ++++  +g r+  d+  la ++       +   +  ++r++  +    e+++++l+ l++
  MMETSP1325-20131115|1482_1 193 MWGPPGTGKTMMAKAVANATSASFISMVGSeFVQKYLGEGPRMVRDVFRLARENAPSIIFIDeidAIATKRFDAQTGADREVQRILLELLNQ 284
                 569********************999888636889999*********999888776666666222333333333333333466666666655 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.4    0.0009       0.4       8      58 ..      22      72 ..      15      96 .. 0.86
   2 ?    2.3   0.0      0.21        93      56      83 ..     269     296 ..     257     309 .. 0.80
   3 ?   -3.1   0.0       9.7   4.3e+03      32      53 ..     378     400 ..     356     404 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0009
  PF01025.14  8 eeeedeeeeleeeleeleeevkelkdkllrllaefenlrkrtekekeeakk 58
                ++ +++ee+l  ++++l+++++ +  + ++ + e++nl++ + + k+e+k+
  MMETSP1325-20131115|1482_1 22 KSDKQAEEDLYVKYKTLQKQLEFFDIQEEYIKDEMKNLKRELIRAKDEIKR 72
                5678899999999******999998888899****************9987 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.21
  PF01025.14  56 akkyaiekflkelLpvlDnleralkaak 83 
                  ++++++++l elL+ +D ++  ++++ 
  MMETSP1325-20131115|1482_1 269 GADREVQRILLELLNQMDGFDQSVNVKV 296
                 567899****************999864 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 9.7
  PF01025.14  32 kdkllrllaefe.nlrkrtekek 53 
                 ++++  l ++f+  ++k+t+k+ 
  MMETSP1325-20131115|1482_1 378 ENRYVVLSKDFDiAYKKHTKKND 400
                 67777778888877777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       905  (0.0661937); expected 273.4 (0.02)
Passed bias filter:                      584  (0.042715); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                        31  (0.00226741); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              31  [number of targets reported over threshold]
# CPU time: 0.97u 0.40s 00:00:01.37 Elapsed: 00:00:00.65
# Mc/sec: 1500.49
//
Query:       MMETSP1325-20131115|1485_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-31  107.4   0.3    3.7e-31  106.4   0.2    1.5  1  PF04815.10 Sec23/Sec24 helical domain
    1.3e-27   95.9   0.0    2.5e-27   95.0   0.0    1.5  1  PF08033.7  Sec23/Sec24 beta-sandwich domain
    1.1e-12   47.2   0.0      2e-12   46.5   0.0    1.4  1  PF00626.17 Gelsolin repeat


Domain annotation for each model (and alignments):
>> PF04815.10  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.4   0.2   8.2e-35   3.7e-31       1     103 []     159     259 ..     159     259 .. 0.99

  Alignments for each domain:
  == domain 1    score: 106.4 bits;  conditional E-value: 8.2e-35
  PF04815.10   1 qeAvavllarkaieklltsslkdvrkaldkklvdilaayrkyvkgssssgqlrlpeslkllPlyilaLlKspalrvfnvspDerayarhlllsldvenllimi 103
                 qeA avl+ar a  +++t+++ d+++++d++l+++++++++y k+++ s  +rl+++++++P+++++L++s++l+ fn+spDe ay+r+ l +++++n+l+mi
  MMETSP1325-20131115|1485_1 159 QEASAVLMARIATHRTETEDVPDILRWVDRSLIRLCSKFADYRKDDPGS--FRLSQEFSMYPQFMFHLRRSQFLQLFNTSPDESAYYRSVLVRENTTNSLVMI 259
                 8**********************************************99..***************************************************8 PP

>> PF08033.7  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.0   0.0   5.6e-31   2.5e-27       1      95 [.      41     143 ..      41     144 .. 0.95

  Alignments for each domain:
  == domain 1    score: 95.0 bits;  conditional E-value: 5.6e-31
                 EE-EEEEEEE-TTEEEEEEB---EES....T-B-SS----TS-SEEEESCE-TT--EEEEEEE....SS-TTS-SEEEEEEEEEEE-----EEEEEEEEEEEE CS
   PF08033.7   1 gfnatlevrtSkelkvsgliGncvsl....snvsekeiGeggtsewklcsldpdstlavyfdi....deklqsgkqayiQfatlYthssgerrlRVttvslpv 95 
                 gf a+++v tS+e k+ g+iG+c+sl    +nv+e+eiG+ggts+w+++ +dp++tlavyf+i     ++l++ k+ yiQf+ +Y+h++g++rlR tt++ p+
  MMETSP1325-20131115|1485_1  41 GFAAQIDVTTSREFKIAGAIGPCSSLkkmgPNVAETEIGTGGTSAWSMGGVDPSTTLAVYFEItnsnANPLPAHKRRYIQFVAQYQHANGRTRLRATTLCGPW 143
                 799***********************999889*******************************88875579999*************************9877 PP

>> PF00626.17  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   0.0   4.3e-16     2e-12       5      76 .]     272     358 ..     269     358 .. 0.97

  Alignments for each domain:
  == domain 1    score: 46.5 bits;  conditional E-value: 4.3e-16
                 EEEECSSGGGEBTTSEEEEEESS........EEEEEEH--..SHHHHHHHHHHHHHHHH.....HHCTSTTEEEEEEEHHHHHHHHH CS
  PF00626.17   5 ppvvplsqsslesgdvyLLdtgf........tiylWiGkg..ssqeeknfaadlaaeld.....seerfplpelirevqgkeparFl 76 
                 p +v+l++ s++++ ++LLdt+f        +i+ W+ +g    +e++ f+++l+a+       +++rfp p++i+++q+k+ arF+
  MMETSP1325-20131115|1485_1 272 PSPVLLDAASVSPDTILLLDTFFhvvvfhgeKIAMWRDQGyqDHEEHIHFKNLLIAPQTdaqriMDQRFPVPRYIVCDQHKSEARFV 358
                 88***************************************9*******************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.36s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 2046.12
//
Query:       MMETSP1325-20131115|1488_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.053   12.1   9.1       0.06   11.9   6.3    1.1  1  PF12569.3  NMDA receptor-regulated protein 1
       0.14   11.8   2.2       0.16   11.6   1.5    1.0  1  PF04851.10 Type III restriction enzyme, res subunit
       0.39    8.8   7.7        0.4    8.8   5.3    1.1  1  PF06375.6  Bovine leukaemia virus receptor (BLVR)
       0.42    9.6   3.9       0.42    9.6   2.7    1.0  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)
        1.2    8.0   6.9        1.4    7.9   4.8    1.1  1  PF07222.7  Proacrosin binding protein sp32
        2.1    8.8  12.0        2.7    8.4   8.3    1.1  1  PF03228.9  Adenoviral core protein VII
        2.5    7.6   7.0        2.7    7.5   4.9    1.1  1  PF10278.4  Mediator of RNA pol II transcription subunit 19
        2.6    7.5   6.8         12    5.4   4.7    1.9  1  PF03836.10 RasGAP C-terminus
        4.1    6.7  14.6        4.8    6.5  10.2    1.1  1  PF11861.3  Domain of unknown function (DUF3381)
        4.8    6.9   6.4        5.5    6.7   4.4    1.1  1  PF11801.3  Tom37 C-terminal domain
        5.9    6.7   7.1        7.2    6.5   4.9    1.1  1  PF14181.1  YqfQ-like protein
        7.7    6.1   8.2        8.2    6.0   5.7    1.0  1  PF02862.12 DDHD domain


Domain annotation for each model (and alignments):
>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   6.3   5.2e-05      0.06     389     442 ..      38      92 ..       4      97 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 5.2e-05
   PF12569.3 389 Lhdkpkakeeeeeeaana.elsaaerkklrkkakkaekkaekeeaekaekeeekk 442
                 +h +  a++e eeea+ a    a+e  k+r+k k++++k e+++++ka++e++++
  MMETSP1325-20131115|1488_1  38 MHQSSVASDEGEEEATDAgMARAQELAKARRKEKRQQRKTERKAQRKAQREAARE 92 
                 3333333333333333332667889999999999999999999999988777655 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.5   0.00014      0.16      58     143 ..       7      85 ..       6      94 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00014
  PF04851.10  58 prkelleqaleefkkfeskkiefekkniavakkdklfgeeqkkskdkeekkkkdkeiilttiqklhkaleeeeend.esksesleal 143
                 ++ ++ +++++e+    +  +e +++++     +   + + ++s  ++e++++ ++  ++ +q+l ka ++e++++ + +++ +++ 
  MMETSP1325-20131115|1488_1   7 DELDIRNKWRREW----QRAVEWCSAQM----HKHISDAMHQSSVASDEGEEEATDAGMARAQELAKARRKEKRQQrKTERKAQRKA 85 
                 5678999999999....33333333333....33334457777778889999****************9999988866666444433 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.3   0.00035       0.4     245     305 ..      31      91 ..       4      97 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00035
   PF06375.6 245 edevslavtvlkeaqeeereenkdakaeeskkssktkkkkqrkekeekkkkkkkskkrchq 305
                 ++ +s a   ++ a++e +ee+ da    +++ +k+++k++r++++ ++k ++k ++++ +
  MMETSP1325-20131115|1488_1  31 HKHISDAMHQSSVASDEGEEEATDAGMARAQELAKARRKEKRQQRKTERKAQRKAQREAAR 91 
                 4455555556666666666777766666666666766666666666555544444444333 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.7   0.00037      0.42     237     290 ..      28      87 ..      10      97 .. 0.56

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00037
                 XXXXX.....X..XXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXX CS
   PF09468.5 237 aplekylaela..sdlskkreaeedaeaaesra....ekkrkkeeeekkkkakeskgvka 290
                 a+++k++++ +  s++ +++  ee  +a + ra    + +rk++ +++k ++k++++ + 
  MMETSP1325-20131115|1488_1  28 AQMHKHISDAMhqSSVASDEGEEEATDAGMARAqelaKARRKEKRQQRKTERKAQRKAQR 87 
                 578899988668845555555555555555555332133333333333333444443333 PP

>> PF07222.7  Proacrosin binding protein sp32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.8    0.0012       1.4     170     232 ..      28      94 ..      11      97 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0012
   PF07222.7 170 erlsnnveell.ksslsldekekvka...akpkeeqllekkqeqleehkteekkkqeeqeeeekeee 232
                  ++++ + + + +ss+ +de e+  +       +e    +++e+ ++ kte+k + + q e  +ee 
  MMETSP1325-20131115|1488_1  28 AQMHKHISDAMhQSSVASDEGEEEATdagMARAQELAKARRKEKRQQRKTERKAQRKAQREAAREER 94 
                 5566666665536788777655544434544555666778999999999999999999999887765 PP

>> PF03228.9  Adenoviral core protein VII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   8.3    0.0024       2.7      34     110 ..      10      91 ..       4      95 .. 0.51

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0024
   PF03228.9  34 rVrshyRasWGslk...grtaveklreklkkderkykeaavastvdevads..vkakaraarrrrrrlrrvarrraarksta 110
                  +r+ +R +W       +    +++ +++ + +   +e ++++t+   a++    +++r+ +r++r+++r+a+r+a+r++++
  MMETSP1325-20131115|1488_1  10 DIRNKWRREWQRAVewcSAQMHKHISDAMHQSSVASDEGEEEATDAGMARAqeLAKARRKEKRQQRKTERKAQRKAQREAAR 91 
                 5799999999766556433333555555555555554444444443333321144444444555555555555555555444 PP

>> PF10278.4  Mediator of RNA pol II transcription subunit 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   4.9    0.0024       2.7     113     170 ..      29      87 ..      12      97 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0024
   PF10278.4 113 skekhkkskvkd.alseetlsdseteegfekkkkkkkkedDkerkkkkkekkkkkkrks 170
                 + +kh    +++ ++ ++  ++++t+ g  + +   k    ++r+++k e+k ++k ++
  MMETSP1325-20131115|1488_1  29 QMHKHISDAMHQsSVASDEGEEEATDAGMARAQELAKARRKEKRQQRKTERKAQRKAQR 87 
                 44555444443323333333333455666555554443344444444444443333222 PP

>> PF03836.10  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   4.7     0.011        12      75     115 ..      28      85 ..       8      92 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.011
  PF03836.10  75 dqYksyleqvletlqkkkkkkk.................fskqklsvkkkkkkkgkkq 115
                 +q+++++++++ ++++ +++ +                 ++k+k++++k ++k ++k 
  MMETSP1325-20131115|1488_1  28 AQMHKHISDAMHQSSVASDEGEeeatdagmaraqelakaRRKEKRQQRKTERKAQRKA 85 
                 7899**********99999544667777887776766667777777777777766655 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  10.2    0.0042       4.8      85     156 ..      14      90 ..       7      94 .. 0.57

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0042
   PF11861.3  85 kWRkkvrkelgekekkkek...eeeeeeeeveekdeeeqideelk..ellekelakekreerrenerkqkeilkeqa 156
                 kWR +  ++++  + +  k   +   ++   +++ eee +d  ++  ++l+k++ kekr++r+ + ++q++ ++e a
  MMETSP1325-20131115|1488_1  14 KWRREWQRAVEWCSAQMHKhisDAMHQSSVASDEGEEEATDAGMAraQELAKARRKEKRQQRKTERKAQRKAQREAA 90 
                 78888887777666665555643333344444444555555444422466666666666666666666666666655 PP

>> PF11801.3  Tom37 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   4.4    0.0048       5.5      60     113 ..      37      89 ..      12      92 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0048
   PF11801.3  60 lglsvavleseedeedeeddeseeaaevaqsklherqltakskekeelkeskns 113
                 ++   ++++s+e ee+ +d  ++ a+e+a++ ++e+++++k+++k + k ++ +
  MMETSP1325-20131115|1488_1  37 AMH-QSSVASDEGEEEATDAGMARAQELAKARRKEKRQQRKTERKAQRKAQREA 89 
                 333.55667777888888888899999999999999999999999988877655 PP

>> PF14181.1  YqfQ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.9    0.0063       7.2     100     148 ..      42      90 ..      28      97 .. 0.35

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0063
   PF14181.1 100 eeteeeeeesteeeekeeeeetktekkekkkkevkkskkekekekeekk 148
                 + +++e ee++     ++ +e  ++++++k++++k++ k++ k ++e++
  MMETSP1325-20131115|1488_1  42 SVASDEGEEEATDAGMARAQELAKARRKEKRQQRKTERKAQRKAQREAA 90 
                 2223333333333333333333222222222222222222222222332 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   5.7    0.0072       8.2     108     170 ..      27      90 ..       3      96 .. 0.40

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0072
  PF02862.12 108 vesltsslsegiassl.rnsslslssedeeseeeseasklsqksksekkkeseeetkeeeeeak 170
                 ++++ +++s ++ +s   + + +++ +d  +++++e  k+ +k+k++++k++++++++ ++ea 
  MMETSP1325-20131115|1488_1  27 SAQMHKHISDAMHQSSvASDEGEEEATDAGMARAQELAKARRKEKRQQRKTERKAQRKAQREAA 90 
                 2233333333332222133333333334444444444444333333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1991  (0.145626); expected 273.4 (0.02)
Passed bias filter:                     1075  (0.0786279); expected 273.4 (0.02)
Passed Vit filter:                       183  (0.013385); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.56u 0.50s 00:00:01.06 Elapsed: 00:00:00.57
# Mc/sec: 404.90
//
Query:       MMETSP1325-20131115|1489_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 1014.63
//
Query:       MMETSP1325-20131115|1486_1  [L=685]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (685 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.03u 0.38s 00:00:01.41 Elapsed: 00:00:00.60
# Mc/sec: 2735.84
//
Query:       MMETSP1325-20131115|1490_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-11   41.7   0.0      7e-09   34.5   0.0    2.1  2  PF00162.14 Phosphoglycerate kinase
  ------ inclusion threshold ------
      0.099   12.0  17.4       0.29   10.5   1.5    2.3  2  PF03066.10 Nucleoplasmin
       0.49    8.0   6.6       0.81    7.3   1.6    2.1  2  PF05642.6  Sporozoite P67 surface antigen
        1.9    7.8   8.3        1.7    7.9   0.4    2.1  2  PF03286.9  Pox virus Ag35 surface protein
        4.2    6.1  16.5       0.68    8.7   4.3    2.1  2  PF03896.11 Translocon-associated protein (TRAP), alpha subunit


Domain annotation for each model (and alignments):
>> PF00162.14  Phosphoglycerate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0023       6.2     251     273 ..       2      24 ..       1      38 [. 0.87
   2 !   34.5   0.0   2.6e-12     7e-09     279     343 ..      72     136 ..      62     154 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0023
                 HHH-------EEE--SEEEEESS CS
  PF00162.14 251 llekakekgvklvlPvDvvvake 273
                 ll+ka++ gv+++lPvD+v+ ++
  MMETSP1325-20131115|1490_1   2 LLSKAHQLGVNVMLPVDFVMGDR 24 
                 78999**************9887 PP

  == domain 2    score: 34.5 bits;  conditional E-value: 2.6e-12
                 --EEEEGGG-----E-EE---HHHHHHHHHHTT-SEEEE------TTSGGG----HHHHHHHH-- CS
  PF00162.14 279 eskvvesdeipedvmilDiGpktielfakvikeaktvvwnGplGvfefeaFakGTkavakalaes 343
                 +++++ s+ + + +++lD+G+kt++l++  i++++t+++ G +Gv + +aF++GT+++++a+ +s
  MMETSP1325-20131115|1490_1  72 TMECTLSEGLMKSMYALDLGTKTLSLVRGPIERSSTIIMLGLVGVAQCSAFQTGTRELVDAVISS 136
                 3366667778999************************************************9987 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   5.3    0.0012       3.3     122     141 ..      40      59 ..      16      65 .. 0.41
   2 ?   10.5   1.5   0.00011      0.29     117     134 ..     205     239 ..     144     246 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0012
                 XXXXXXXXXXXXXXXXXXXX CS
  PF03066.10 122 edeeeeddeedddeeeeeee 141
                 +++e+ed+ee ++++e+e+e
  MMETSP1325-20131115|1490_1  40 DEDEDEDEEEPEEADEDEDE 59 
                 11122222222222222222 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00011
                 ..................----XXXXXXXXXXXXX CS
  PF03066.10 117 e.................eddeedeeeeddeeddd 134
                 e                 +ddee++ eeddee+ d
  MMETSP1325-20131115|1490_1 205 EtkleeelkaqrerdgvvSDDEEEDAEEDDEEEGD 239
                 24444577777777667644444444444444433 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1    0.0049        14     113     127 ..      40      54 ..      10     127 .. 0.71
   2 ?    7.3   1.6   0.00029      0.81      90     127 ..     199     236 ..     166     245 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.0049
   PF05642.6 113 kedseedddeeeeed 127
                 +ed++ed++e ee d
  MMETSP1325-20131115|1490_1  40 DEDEDEDEEEPEEAD 54 
                 122222222222222 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.00029
   PF05642.6  90 qepvsqeselqsdteineddkGskedseedddeeeeed 127
                 +e+ + e++l+++ + +++ +G  +d+ee+d ee++e+
  MMETSP1325-20131115|1490_1 199 RERTEDETKLEEELKAQRERDGVVSDDEEEDAEEDDEE 236
                 56678899999**********99888777765443332 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   1.2     0.012        32      84     109 ..      39      63 ..      31      83 .. 0.65
   2 ?    7.9   0.4   0.00063       1.7      42      97 ..     187     239 ..     174     246 .. 0.65

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.012
   PF03286.9  84 eeededkdteenendddekeeskdsk 109
                  +eded+ +ee++++ de+e++ d+ 
  MMETSP1325-20131115|1490_1  39 GDEDEDE-DEEEPEEADEDEDEADPA 63 
                 4556666.444444466666666655 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00063
   PF03286.9  42 DieiPvsekkpkkkrkttkrkpvkkkkskkkekekeeeeekkeeededkdteenen 97 
                  ie+P+ +  ++++r+  + k    +++ k+++e+  + + +eeed ++d+ee+ +
  MMETSP1325-20131115|1490_1 187 NIEVPGVRALSERERTEDETK---LEEELKAQRERDGVVSDDEEEDAEEDDEEEGD 239
                 678888888888887776666...34444555566666666666676666676654 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   1.7     0.012        32      52      71 ..      40      60 ..      13      83 .. 0.58
   2 ?    8.7   4.3   0.00025      0.68      27      72 ..     193     238 ..     180     246 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.012
  PF03896.11 52 deaeveed.ekteaeeeedee 71
                de e e++ e +ea+e+ede 
  MMETSP1325-20131115|1490_1 40 DEDEDEDEeEPEEADEDEDEA 60
                111222220122244444433 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00025
  PF03896.11  27 klaasaqdltedeeaeddvvdedeedeaeveedekteaeeeedeee 72 
                   a s+++ tede+  +++ + + e + +v +de+++aee+++ee 
  MMETSP1325-20131115|1490_1 193 VRALSERERTEDETKLEEELKAQRERDGVVSDDEEEDAEEDDEEEG 238
                 4566778999999999999999999999999**9999999999983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       633  (0.046299); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        74  (0.00541252); expected 13.7 (0.001)
Passed Fwd filter:                        32  (0.00234055); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.71u 0.41s 00:00:01.11 Elapsed: 00:00:00.56
# Mc/sec: 1038.42
//
Query:       MMETSP1325-20131115|1491_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-05   24.1   0.1    2.7e-05   23.7   0.1    1.2  1  PF01217.15 Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> PF01217.15  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.1     2e-09   2.7e-05       8     137 ..       9     138 ..       3     152 .. 0.89

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 2e-09
                 E-----EEEEEESS---HHHHHHHHHHHHHHHHTS-SSS-SEEEETTEEEEEEEETTEEEEEEE-----HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTTB----BS-.--HHHHHHHHHH CS
  PF01217.15   8 lnkkgkvrlakfytavddkkkqklieevyelvsaRdsklsniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdkyfgnVceldlvfnfekvylildEivsgGeile.tskkevlkrvel 137
                   k+gk ++ + ++ +   + + l++   +l  + +++   ++e++ ++ +Y+   +L+ ++i ++  n +  le+++l+  +L  + + V e ++  ++ ++ ++ dE++++G  +e +s +++  ++++
  MMETSP1325-20131115|1491_1   9 CTKNGKALMSRQFVDMTRIRIEGLLAAFPKLLGTGNQQ-HTFIETDSVRYVYQPIEGLFLLLITNKASNIVEDLETLRLLSKVLPDIAQGVTEEAVQGKMFELVFAFDEVITTGGYREqISLQQIQTNLSM 138
                 57899999999999999999999999999999999777.78*********************************************************************988655542788888777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       912  (0.0667057); expected 273.4 (0.02)
Passed bias filter:                      503  (0.0367905); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 813.86
//
Query:       MMETSP1325-20131115|1492_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|1494_1  [L=380]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-41  140.5   0.0      5e-41  140.3   0.0    1.0  1  PF00501.23 AMP-binding enzyme
     0.0047   16.3   0.0       0.01   15.2   0.0    1.5  1  PF00391.18 PEP-utilising enzyme, mobile domain
  ------ inclusion threshold ------
       0.11   10.9   0.0        0.2   10.0   0.0    1.3  1  PF03321.8  GH3 auxin-responsive promoter


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.3   0.0   1.1e-44     5e-41       1     298 [.      36     362 ..      36     374 .. 0.88

  Alignments for each domain:
  == domain 1    score: 140.3 bits;  conditional E-value: 1.1e-44
                 EHHHHHHHH.HHHHHHHHH----TT-EEEEE-SSSHHHHHHHHHHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHHHHHHHHHHHCTTCTT.ECC...............S-E...ECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTSEEEEES-.TTCCHHCTTTHHHHTTT-EEEEESSCCT..T-HHHHHHHHHHCT-SEEE--HHHHHHHHHHCHC...........CCTTTTT--EEEE-----THHHHHHHHHHTT.SEEEEEE--CGGSSESEE CS
  PF00501.23   1 TYrelderv.nrlaagLrklGvkpgdrVaillpnspewviaflaclkaGavyvplyptlpaerlayilndseakvlitddelltklleaaskelakekliivr.tdk...............eed...svgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpddrvlsllp.lhfdgsilellaplllGatvvlvspedl..kdpalllddiekykvtvlalvptvlelllkaiek...........kkldlsslrlilsggeplspellerlreafggirivngYGltEttgvvtv 298
                 +Y++l+e +  +l+  + +lG+ ++drV+++lpn+p   +afl+   + ++y+pl+p l++ + ++  +d  ak++++ +  ++++ ++ +++l    + +v  +++               + +       +  + e  + + +s++  ++    d++a+++ TSGtT+kPK V lth++++ ++  i+ +++l ++d+ + ++p +h++g  +++l+++l+Ga+vv++++  +  +  ++l +d  + ++t+ ++vpt+ +++l+  e+             ++ ++l +i ++ ++l p + er+r++f +++++++Y +tE+ ++++ 
  MMETSP1325-20131115|1494_1  36 SYAQLYEFItANLGPRMAELGLSRKDRVCVVLPNGPAAAVAFLGMCLF-CTYAPLNPGLKESEFEFEYEDMPAKAVVVYEGATDSTAAQVARRLGLPIIELVLkGHDatpavdgggtamdieD-SatiPGLFDLRWVENPLEPLASAQGLPN--ARDEIALVLHTSGTTKKPKIVPLTHGQITCGALCIKSTLQLAHTDVCINIMPlFHIHGISVNILTTILSGAAVVCTPGLIDpaEFYHSLSKDAPHPQPTWYSAVPTMHDKILQYGESlvasrgglegaLTSQDHTLTMIRNCSAALLPPVSERMRKLF-NCTVLPTYAMTESMPICSP 362
                 689999865257999999**************************8765.9******************************************999988888887333678999****999751.2423444555555555555555555555..59************************************************************************77766654444889999999*********************************98999999***********************.5**************9975 PP

>> PF00391.18  PEP-utilising enzyme, mobile domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   2.3e-06      0.01      32      58 ..     107     133 ..      99     151 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 2.3e-06
  PF00391.18  32 aaGivteeGgltSHaailArelgiPav 58 
                 a+++v+ eG++ S aa +Ar+lg+P +
  MMETSP1325-20131115|1494_1 107 AKAVVVYEGATDSTAAQVARRLGLPII 133
                 89***********************87 PP

>> PF03321.8  GH3 auxin-responsive promoter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   4.4e-05       0.2      78     104 ..     188     213 ..     181     226 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 4.4e-05
   PF03321.8  78 ekityfalSSGTtggksKliPvteell 104
                 ++i   +++SGTt++ +K++P+t+  +
  MMETSP1325-20131115|1494_1 188 DEIALVLHTSGTTKK-PKIVPLTHGQI 213
                 6788899********.*******9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.40s 00:00:01.08 Elapsed: 00:00:00.53
# Mc/sec: 1718.14
//
Query:       MMETSP1325-20131115|1484_1  [L=759]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-21   76.6   0.3    6.4e-21   75.1   0.0    1.9  2  PF13519.1  von Willebrand factor type A domain
    3.5e-21   75.6   0.0    5.6e-21   74.9   0.0    1.3  1  PF00092.23 von Willebrand factor type A domain
      1e-13   51.0   0.1    2.6e-11   43.3   0.0    2.4  2  PF13768.1  von Willebrand factor type A domain
    1.5e-05   24.1   0.1       0.16   10.9   0.0    2.4  2  PF05762.9  VWA domain containing CoxE-like protein
  ------ inclusion threshold ------
      0.018   14.1   0.0      0.032   13.3   0.0    1.3  1  PF01079.15 Hint module
      0.058   13.0   0.0       0.12   11.9   0.0    1.4  1  PF12169.3  DNA polymerase III subunits gamma and tau domain III


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.0   2.8e-24   6.4e-21       1     157 [.      73     251 ..      73     262 .. 0.83
   2 ?   -1.6   0.1         1   2.3e+03      40      45 ..     411     416 ..     356     491 .. 0.52

  Alignments for each domain:
  == domain 1    score: 75.1 bits;  conditional E-value: 2.8e-24
   PF13519.1   1 dlvlvlDvSgSMnaedv............sptrldaakaalkdlldel.pgdrvglvafsgsaelvapltsdraalkaalnsldprlmpgggtnlaaalalalellakad..grraaivlvtDGedn.......ssdieaasalk.ragikiyvvgvgsdegaeallkelaeatggryfd 157
                 d+v v+DvSgSM+                + t ld +k+a+++++++l p d+++lv++s+ a +++plts  +a k   +++  +l+++ggtnl ++l +++e+++  +  +r+ a++l+tDG +n       +  ++++++   + +  i ++g+g + ++ +ll++la  ++g+y  
  MMETSP1325-20131115|1484_1  73 DIVCVVDVSGSMAKSATiqaangqpaendGLTVLDITKHAVRTIINTLkPADNFSLVSYSNTATTNLPLTSMDEAGKKRAEEVLETLSAEGGTNLWDGLHKGMEEIRTTSnpSRGSAVLLLTDGCPNrvpprghQAMLNRYKDSNpDMNCSISTFGFGYSLDS-ELLNDLAILGNGQYSF 251
                 799*********65533566677777766699***************74699******************87777777777777777788****************965444999*********999777543333334777777677899*********998.9************965 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1
   PF13519.1  40 rvglva 45 
                 +++++a
  MMETSP1325-20131115|1484_1 411 QATVTA 416
                 222222 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   2.4e-24   5.6e-21       1     163 [.      73     249 ..      73     259 .. 0.89

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 2.4e-24
                 EEEEEEE-STTS-H............HH.....HHHHHHHHHHHHHHH.CCTTTEEEEEEEESSSEEEEE-TCCHHCCSSCGGHH-CCGGSTTS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE-----C---STHHHHHHHHHH......GEEEEEEEE--SCCCHHHHHHCS-SSTTCCCB CS
  PF00092.23   1 DivfvlDgSgSige............en.....fekvkefikkliekldigpdsvrvglvqyssdaktevslndfkskeellsavsknlkylgggtntgkALkyalenlfssaagsrenapkvvillTDGksndggspeaaaaklrek......klgitvfgvGvsdvdeeelrsiaskpdseghv 163
                 Div v+D+SgS+ +            en     ++ +k++++++i+     +  ++++lv+ys++a+t  +l+++ +  ++++  + +  + +ggtn+ ++L + +e++ ++   s++     v+llTDG +n  +    +a+ +r+k      +  i +fg+G    d+e l+++a  +  +g++
  MMETSP1325-20131115|1484_1  73 DIVCVVDVSGSMAKsatiqaangqpaENdgltvLDITKHAVRTIIN---TLKPADNFSLVSYSNTATTNLPLTSMDEAGKKRAEEVLETLSAEGGTNLWDGLHKGMEEIRTT---SNPSRGSAVLLLTDGCPNRVPPRGHQAMLNRYKdsnpdmNCSISTFGFGY-SLDSELLNDLAILG--NGQY 249
                 9*************8777776666651166666*************...66************************88888888888************************99...999999**************9999999999999*****************.***********666..3333 PP

>> PF13768.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.2     0.006        14       2      21 ..      73      90 ..      72      94 .. 0.79
   2 !   43.3   0.0   1.1e-14   2.6e-11      20     156 .]     108     251 ..      98     251 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.006
   PF13768.1  2 evVivvDvsssmsgepvelv 21
                ++V vvDvs+sm  +   ++
  MMETSP1325-20131115|1484_1 73 DIVCVVDVSGSMAKSA--TI 90
                8***********9983..44 PP

  == domain 2    score: 43.3 bits;  conditional E-value: 1.1e-14
   PF13768.1  20 lvkdaLsailrsLpprdkvnvvlfgtearplfpgsravssaelqellqkvkeleadlGasnlegaLkealrqp...akpgearhvlllsdgsstsga....ervlqliraaa..rkirifalglgetlsadmlqeLAeaggGsyef 156
                   k+a + i+ +L p d +++v+   +a    p   ++++a ++++++ +++l+a +G++nl+  L + ++     + p + + vlll+dg++ + +    + +l   +++    + +i+++g+g +l+ ++l  LA  g+G+y+f
  MMETSP1325-20131115|1484_1 108 ITKHAVRTIINTLKPADNFSLVSYSNTATTNLPL-TSMDEAGKKRAEEVLETLSA-EGGTNLWDGLHKGMEEIrttSNPSRGSAVLLLTDGCPNRVPprghQAMLNRYKDSNpdMNCSISTFGFGYSLDSELLNDLAILGNGQYSF 251
                 6799********************9987765565.5679999*************.9*************744455999999**********9664423534455555555545668999************************97 PP

>> PF05762.9  VWA domain containing CoxE-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.1   9.1e-05      0.21      55      76 ..      69      89 ..      56      96 .. 0.83
   2 !   10.9   0.0   7.2e-05      0.16     113     160 ..     153     197 ..     134     215 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9.1e-05
   PF05762.9 55 rkprrlvllvDvSgSmeaysav 76
                r p ++v +vDvSgSm++ sa 
  MMETSP1325-20131115|1484_1 69 RLPSDIVCVVDVSGSMAK-SAT 89
                55779************9.544 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 7.2e-05
   PF05762.9 113 aeaLlrvsaavedlgGgTrigealaeflelvtrpal..rravvvivSDgl 160
                 +e+L+ +s      +GgT++ ++l++ +e ++ ++   r+++v++++Dg 
  MMETSP1325-20131115|1484_1 153 EEVLETLS-----AEGGTNLWDGLHKGMEEIRTTSNpsRGSAVLLLTDGC 197
                 56677777.....99**************9988776679*********85 PP

>> PF01079.15  Hint module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.4e-05     0.032      10      43 ..     576     609 ..     568     617 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01079.15  10 ggCFpgestVtledgeqkklselriGdrVlavde 43 
                  gCF+g + V l++g+ k+ +++  Gd V + ++
  MMETSP1325-20131115|1484_1 576 AGCFDGGANVALANGRVKRCDQIAKGDLVRTSST 609
                 79**************************998775 PP

>> PF12169.3  DNA polymerase III subunits gamma and tau domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.4e-05      0.12      63     125 ..     131     193 ..     114     194 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 5.4e-05
   PF12169.3  63 llkvapeaaedlslpeeererlkelakklsleqlsrlWqlllkGleevknapdprqaaEMaLl 125
                 + ++a ++   +s++e+ ++r +e+ ++ls e  + lW+ l kG ee+++ ++p  +  ++Ll
  MMETSP1325-20131115|1484_1 131 YSNTATTNLPLTSMDEAGKKRAEEVLETLSAEGGTNLWDGLHKGMEEIRTTSNPSRGSAVLLL 193
                 444444434445699999************************************988887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (759 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.07u 0.40s 00:00:01.47 Elapsed: 00:00:00.61
# Mc/sec: 2981.70
//
Query:       MMETSP1325-20131115|1497_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.67
# Mc/sec: 293.29
//
Query:       MMETSP1325-20131115|1495_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-47  162.1   4.3    1.3e-47  161.8   3.0    1.1  1  PF03878.10 YIF1


Domain annotation for each model (and alignments):
>> PF03878.10  YIF1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.8   3.0   9.7e-52   1.3e-47      37     239 ..      73     281 ..      39     282 .. 0.85

  Alignments for each domain:
  == domain 1    score: 161.8 bits;  conditional E-value: 9.7e-52
  PF03878.10  37 sklkyyFavdtaYvvkkLklllfPyl..hrdWerkle.............resyvpPreDvnaPDlYiPlmafityvllaglllGlqdrFsPealglkassalavvllellilklglyllnvkselklldllaysGYkfvglilavlakllfgksgyylvlaytslalgvFllrslktkllsaeaaaegavvtssqkkkklYlllviaavqalllllL 239
                 + lkyyF+vd++Yv  kL+ ++f  +  ++ W+r                +++++ P  D naPDlY+Plm+f+ty+++ +   G++++F+Pe+l   + s l + ++e+++++ gly+l+v  +++lldl a +GYk+vgl++ ++++++ g+++y++++++t   + +F+l++l  +      +++g      +++ ++ ll   a+ q+  + +L
  MMETSP1325-20131115|1495_1  73 NALKYYFEVDNRYVLTKLRTIVFSAVlpNKRWKRVEIdgttkldgqepqyAKKFLTPSLDENAPDLYLPLMSFVTYIIVCSYIKGTNGKFTPEVLTQVMYSCLGFQIFEVMLIRCGLYVLQV-QQAPLLDLTANTGYKYVGLCINMVVGMVLGRWVYRIAMLWTGSMTSYFMLKTLANNYA---FSSHG-----VSSQTRMPLLYGFALLQFISIWWL 281
                 569********************865337779876445899999*9999999**********************************************************************.99**************************************************987754...23333.....233457888888888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.60
# Mc/sec: 1150.25
//
Query:       MMETSP1325-20131115|1498_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-06   28.8   2.0    2.2e-06   27.7   1.4    1.5  1  PF04930.10 FUN14 family
  ------ inclusion threshold ------
      0.053   12.7   0.5      0.095   11.9   0.3    1.3  1  PF13202.1  EF hand
      0.065   12.7   0.0      0.092   12.2   0.0    1.2  1  PF13833.1  EF-hand domain pair
        4.3    7.4   7.7       0.98    9.4   2.7    1.8  2  PF10439.4  Bacteriocin class II with double-glycine leader peptide


Domain annotation for each model (and alignments):
>> PF04930.10  FUN14 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   1.4   6.5e-10   2.2e-06       3     100 .]      20     123 .]      18     123 .] 0.92

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 6.5e-10
  PF04930.10   3 giGalsGlvtGyalkkvgklaaiavGggilllqilaqkGliki.nwkklekkvdkvaekve.....adkaekevdtllkkaedllkkniiflaaFlaGfllGfa 100
                 g Ga++G+  G +lk v+++a++++Gg+++++        i i n + ++++++++a +          ++k++d l++ka+ ++ + ++++++ l+Gfl+Gf+
  MMETSP1325-20131115|1498_1  20 GAGAIIGYTGGAILKSVTRFALVIAGGAFVAVHSGLALPAIPIgNADHFKAEAKETAVNGLdmngdGVLDKKDADLLWHKAQPWIARHVPLSGGLLGGFLMGFK 123
                 68*******************************9999999999899999999999988887888877778899999**************************97 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   2.8e-05     0.095       8      19 ..      80      91 ..      80      93 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.8e-05
                H--S----B-HH CS
   PF13202.1  8 fDlNgDGkIsre 19
                +D+NgDG ++++
  MMETSP1325-20131115|1498_1 80 LDMNGDGVLDKK 91
                6*********97 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.7e-05     0.092      21      46 ..      67      92 ..      55      92 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 2.7e-05
   PF13833.1 21 glseeevdilfrefDtdgdGkisfeE 46
                ++++e  ++ ++ +D++gdG +++++
  MMETSP1325-20131115|1498_1 67 HFKAEAKETAVNGLDMNGDGVLDKKD 92
                48899999***************986 PP

>> PF10439.4  Bacteriocin class II with double-glycine leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.7   0.00029      0.98      23      61 ..      13      55 ..      10      57 .. 0.71
   2 ?   -1.6   0.1      0.81   2.8e+03      36      57 ..     112     117 ..     105     122 .. 0.51

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00029
   PF10439.4 23 gkcvagigggaaaGalaGaatgga....vGglaGAlvGavvGa 61
                ++ v+++g+ga++G++ Ga++ ++    +  ++GA+v+ ++G 
  MMETSP1325-20131115|1498_1 13 QDVVKSAGAGAIIGYTGGAILKSVtrfaLVIAGGAFVAVHSGL 55
                4556666666666666666666669998888889999999885 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.81
   PF10439.4  36 GalaGaatggavGglaGAlvGa 57 
                 G+l+G                +
  MMETSP1325-20131115|1498_1 112 GGLLG----------------G 117
                 22222................2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 535.91
//
Query:       MMETSP1325-20131115|1496_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-17   62.3   0.4    5.6e-17   61.3   0.3    1.5  1  PF14310.1  Fibronectin type III-like domain
    0.00055   19.8   0.2      0.001   18.9   0.1    1.5  1  PF07705.6  CARDB
    0.00087   19.1   1.0    0.00087   19.1   0.7    2.2  3  PF01345.13 Domain of unknown function DUF11
  ------ inclusion threshold ------
        0.4   10.6   5.4       0.96    9.4   1.3    2.8  2  PF10633.4  NPCBM-associated, NEW3 domain of alpha-galactosidase


Domain annotation for each model (and alignments):
>> PF14310.1  Fibronectin type III-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.3   1.6e-20   5.6e-17       1      69 [.      48     122 ..      48     124 .. 0.91

  Alignments for each domain:
  == domain 1    score: 61.3 bits;  conditional E-value: 1.6e-20
   PF14310.1   1 evvQlYvsdpegsverpvkqLkgFekve.LapGesetvtitldrkdlsvwdeeaqn.....wvveaGeytvlvgd 69 
                 evvQ+Yv+ p+++v  p ++L++Fe+ + L pGes+tv++t+++++ +v+ ++a++       ve+G  +v+vg 
  MMETSP1325-20131115|1496_1  48 EVVQVYVKTPDSTVPSPLIRLAAFERLAaLTPGESRTVSLTISPESHAVVYPNAESvyveqTAVESGALEVYVGG 122
                 8**************************99*********************9998864444477888*******97 PP

>> PF07705.6  CARDB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   3.1e-07     0.001      12      74 ..      23      94 ..      15     113 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 3.1e-07
                -SCE-TTSEEEEEEEEEE-----B--EE.EEEEE---EEEEEEE........S-B-BT-EEEEEEEEE---- CS
   PF07705.6 12 pseayagenvtitvtvkNqGtaasgsfk.vrlylngelvstvtv........psLaagesttvsftwtpate 74
                 ++a++ +++t tvtv+N+G+ +s ++  v +   +++v +  +        + L +ges+tvs+t+ p++ 
  MMETSP1325-20131115|1496_1 23 DGSASPCDHLTATVTVTNTGDVTSDEVVqVYVKTPDSTVPSPLIrlaaferlAALTPGESRTVSLTISPESH 94
                5677888999*************88764044444444444333488888888***************99844 PP

>> PF01345.13  Domain of unknown function DUF11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.7   2.6e-07   0.00087      36      61 ..      25      50 ..      19      65 .. 0.88
   2 ?   -2.2   0.0       1.2   4.1e+03      47      49 ..      87      89 ..      72     111 .. 0.59
   3 ?   -2.2   0.0       1.2     4e+03      43      49 ..     136     142 ..     123     143 .. 0.74

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 2.6e-07
  PF01345.13 36 tarpGdtvtytvtvtNtGpatArnvv 61
                +a p+d +t tvtvtNtG++t   vv
  MMETSP1325-20131115|1496_1 25 SASPCDHLTATVTVTNTGDVTSDEVV 50
                689******************88854 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 1.2
  PF01345.13 47 vtv 49
                +t+
  MMETSP1325-20131115|1496_1 87 LTI 89
                332 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 1.2
  PF01345.13  43 vtytvtv 49 
                 +t+t+t 
  MMETSP1325-20131115|1496_1 136 TTVTITG 142
                 5677765 PP

>> PF10633.4  NPCBM-associated, NEW3 domain of alpha-galactosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.3   0.00028      0.96       4      64 ..      29      95 ..      26      99 .. 0.77
   2 ?   -1.0   0.1      0.48   1.6e+03       3      19 ..     128     144 ..     126     147 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00028
   PF10633.4  4 Getvtltltvtndg.tapatnvslslslPeGWt.....vevspasaaslapGetveatvkVtpPaga 64
                 +  t+t+tvtn+g  ++ + v++ +++P+          ++ +++a l pGe+ ++  +++p + a
  MMETSP1325-20131115|1496_1 29 CDHLTATVTVTNTGdVTSDEVVQVYVKTPDSTVpspliRLAAFERLAALTPGESRTVSLTISPESHA 95
                567799********44555678999999987556555566788889999999999999999998777 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.48
   PF10633.4   3 aGetvtltltvtndgta 19 
                  G+   l +tvt +gta
  MMETSP1325-20131115|1496_1 128 DGANGVLSTTVTITGTA 144
                 56666666777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 714.11
//
Query:       MMETSP1325-20131115|1499_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 464.89
//
Query:       MMETSP1325-20131115|1501_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.7   3.0      0.045   13.2   2.0    1.2  1  PF07331.6 Tripartite tricarboxylate transporter TctB family


Domain annotation for each model (and alignments):
>> PF07331.6  Tripartite tricarboxylate transporter TctB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   2.0   3.3e-06     0.045       4      91 ..      30     115 ..      27     118 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.3e-06
   PF07331.6   4 fviGlvllalGvvlalgalqlplgtgarmgPgffPlllgillavlgvvllvkalrgaeaedseaiekaawrpvllvlgalllfalllp 91 
                 +++Gl  +a+++ +++++l+  +  ++++g++  Plll +    lg++l   al g +++ s++  ++a+ ++ +v++a++++a+++p
  MMETSP1325-20131115|1501_1  30 TATGLQYFAVAATWFFATLGDAVEFASKPGARASPLLLVC--GSLGALLQSAALSGCDEDLSDFTIRSAAWAYSWVCVAIAAYAVVVP 115
                 5678888999999999999988888889999999999865..67899999999988788889999999999**************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       385  (0.0281597); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.65
# Mc/sec: 438.72
//
Query:       MMETSP1325-20131115|1493_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-15   56.7   0.0    3.5e-15   56.2   0.0    1.2  1  PF00300.17 Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.2   0.0   2.6e-19   3.5e-15       2     156 ..      19     190 ..      18     192 .. 0.67

  Alignments for each domain:
  == domain 1    score: 56.2 bits;  conditional E-value: 2.6e-19
                 EEEEE---BH.....CCCTTBGGGTCC......--B-----HHHHHHHTHHHH..TTHCESE...EEEESSHHHHHHHHHHCCCCEEEEEE.GGGSHHHH.-......---TTCHHHHHHHHHCHHHHHHHHCCTSTTTSS.CHHHHHH.HHHHHHHHHHH..HCTTTSEEEEEE-TTHHH CS
  PF00300.17   2 lylvRHGese.....lnkegrlqgwsd......vpLtekGreqarelgkkLkr..adlqida...vytSplkRaiqTaeilleeldipiiqeprLrerdf.g......eweglpkaevkeelpeeyekwkrdkkefrppegesladvye.Rvapfleelie..akdkgenvlivsHggvlr 156
                 l++vRHGe++           + ++++      +pLt  G+ qa  +++ L++  ++++      +y+Spl+R++ Ta +l+e+l+  ++  p+L +  +        +++ lp++e+ e +p+  +  k+++  f+    e  + v+  R+a    +  +    ++  +vl+v+H+  +r
  MMETSP1325-20131115|1493_1  19 LWMVRHGERVdetseS---MAWMEQTPrsrlfdPPLTRAGEGQAATAAETLRAhpSKPN--FgatIYASPLQRCLRTASVLAEQLGKSVRVVPGLGQCAAvAkrrgvrALDLLPESEMMEICPQMIALEKEAPDTFE----EACDWVASeRTAGGCGTAADeqSASGRMDVLVVTHREGVR 190
                 89******88332220...2244444466677469*****************8554444..3447*********************999999999666553333333255678888888888844444444333332....222333323666666666666557888889*****98777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.57
# Mc/sec: 995.73
//
Query:       MMETSP1325-20131115|1503_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.64
# Mc/sec: 258.36
//
Query:       MMETSP1325-20131115|1504_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.30s 00:00:00.62 Elapsed: 00:00:00.49
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|1502_1  [L=300]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.037   13.4   3.4      0.042   13.2   1.3    2.0  2  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.3     3e-06     0.042     117     138 ..     146     173 ..      75     181 .. 0.81
   2 ?   -2.7   0.0      0.25   3.4e+03       9      40 ..     211     243 ..     197     246 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3e-06
                 .......----XXXXXXXXXXXXXXXXX CS
  PF03066.10 117 e......eddeedeeeeddeedddeeee 138
                 +      + deed ++ +deedddeee+
  MMETSP1325-20131115|1502_1 146 DlqifvdDGDEEDVDDGSDEEDDDEEEK 173
                 0555555899999******999999986 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.25
                 -EEESTT-EEEE-T.TSS-----EEEEEEEE-- CS
  PF03066.10   9 ceLkeekkevtfkv.eeddeaehqLslrticlg 40 
                 c L+++ + ++  v e+++++   L l  +c g
  MMETSP1325-20131115|1502_1 211 CILTKDGELHSHTVfEDEKKNRVMLFLIGLCFG 243
                 455555555555554556666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       640  (0.046811); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.38s 00:00:01.04 Elapsed: 00:00:00.76
# Mc/sec: 945.93
//
Query:       MMETSP1325-20131115|1506_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0013   18.1   0.0     0.0017   17.8   0.0    1.2  1  PF13414.1 TPR repeat
  ------ inclusion threshold ------
      0.019   15.5   0.3      0.027   15.0   0.2    1.4  1  PF13432.1 Tetratricopeptide repeat
      0.043   14.3   0.3      0.097   13.2   0.1    1.6  2  PF13428.1 Tetratricopeptide repeat
      0.058   12.0   0.0      0.059   11.9   0.0    1.0  1  PF12569.3 NMDA receptor-regulated protein 1
      0.087   12.6   0.0       0.11   12.2   0.0    1.1  1  PF13424.1 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   6.1e-07    0.0017      19      48 ..       7      36 ..       5      55 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 6.1e-07
   PF13414.1 19 ydeAieayekAleldpnnaelyynlAlayl 48
                ++eA+++ ++Al+l+p ++ely ++A+++ 
  MMETSP1325-20131115|1506_1  7 HEEAERLVSEALALSPLTPELYEQRAQVLS 36
                89*************************975 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.2     1e-05     0.027      14      46 ..       8      41 ..       5      63 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1e-05
   PF13432.1 14 deAlaaleaalalaPeaaeallllaeallrl.gr 46
                +eA+++ ++alal P+ +e +  +a++l +  gr
  MMETSP1325-20131115|1506_1  8 EEAERLVSEALALSPLTPELYEQRAQVLSHHvGR 41
                89**************************964355 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   3.5e-05     0.097      17      43 ..       7      33 ..       4      34 .. 0.93
   2 ?   -1.7   0.0       2.2   5.9e+03      17      21 ..      49      53 ..      39      62 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.5e-05
   PF13428.1 17 pdeAiallrralalaPddaealllLar 43
                ++eA++l  +alal+P  +e++ + a+
  MMETSP1325-20131115|1506_1  7 HEEAERLVSEALALSPLTPELYEQRAQ 33
                79********************99998 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 2.2
   PF13428.1 17 pdeAi 21
                ++ A+
  MMETSP1325-20131115|1506_1 49 FASAR 53
                44443 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.2e-05     0.059     211     258 ..       7      55 ..       3      59 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.2e-05
   PF12569.3 211 rekaleyidkaiehtptlvelymtkarilk.haGdlekAaelmeearkl 258
                  e+a +++++a++ +p  +ely  +a++l  h G l + ++   +ar l
  MMETSP1325-20131115|1506_1   7 HEEAERLVSEALALSPLTPELYEQRAQVLShHVGRLFEVMSDFASARFL 55 
                 578999**********************961568888877777777755 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.1e-05      0.11      20      66 ..       6      53 ..       4      55 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.1e-05
   PF13424.1 20 dydeAlelyekalellrelgddhpdtaral.nnlanlylalgdydeAl 66
                 ++eA+ l  +al+l  ++++   ++a +l ++ ++l++ + d+++A+
  MMETSP1325-20131115|1506_1  6 LHEEAERLVSEALALSPLTPELYEQRAQVLsHHVGRLFEVMSDFASAR 53
                589************99**********99989******9999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 264.43
//
Query:       MMETSP1325-20131115|1505_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 826.98
//
Query:       MMETSP1325-20131115|1508_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.5   0.7       0.03   14.0   0.1    1.4  2  PF12578.3 Myotubularin-associated protein


Domain annotation for each model (and alignments):
>> PF12578.3  Myotubularin-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.34   4.6e+03      41      58 ..      16      31 ..       5      36 .. 0.57
   2 ?   14.0   0.1   2.2e-06      0.03      29      71 ..      60     102 ..      55     111 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.34
   PF12578.3 41 lisllsdcsvsspspata 58
                l + ++  s s+ps++++
  MMETSP1325-20131115|1508_1 16 LMANAQ--SGSLPSSTDT 31
                333334..5555555555 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 2.2e-06
   PF12578.3  29 sseapdllllkllisllsdcsvsspspataseqlsktassvPa 71 
                 ++++p+++l kl+ +lls++++s+++p++ + q s++a ++P+
  MMETSP1325-20131115|1508_1  60 TKDSPTTMLRKLRAELLSKSAESLAQPESEEKQASEEADTRPS 102
                 67899***********************************994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 452.65
//
Query:       MMETSP1325-20131115|1507_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-21   75.2   0.2    2.5e-21   75.2   0.2    4.2  4  PF08564.5  Cdc37 C terminal domain
    9.7e-21   74.7  19.0    9.7e-21   74.7  13.1    3.2  3  PF03234.9  Cdc37 N terminal kinase binding
    7.8e-20   70.9   2.6    7.8e-20   70.9   1.8    2.9  2  PF08565.6  Cdc37 Hsp90 binding domain
    0.00061   19.5   6.7    0.00061   19.5   4.6    3.2  4  PF14282.1  FlxA-like protein


Domain annotation for each model (and alignments):
>> PF08564.5  Cdc37 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.4   6.6         4   1.4e+04      84      84 ..      78      78 ..      39     119 .. 0.63
   2 ?   -2.0   0.1      0.84   2.9e+03      39      59 ..     188     208 ..     186     245 .. 0.69
   3 ?    0.5   0.2      0.14   4.7e+02      56      92 ..     281     318 ..     251     326 .. 0.56
   4 !   75.2   0.2   7.2e-25   2.5e-21       1      66 [.     327     384 ..     327     385 .] 0.97

  Alignments for each domain:
  == domain 1    score: -7.4 bits;  conditional E-value: 4
   PF08564.5 84 e 84
                e
  MMETSP1325-20131115|1507_1 78 E 78
                1 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.84
   PF08564.5  39 evnkvlakmkveeAekiverl 59 
                  + k++ + ++ee ++++ + 
  MMETSP1325-20131115|1507_1 188 LLEKYIDTHSMEECKQLMHMN 208
                 567777777788888877654 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.14
   PF08564.5  56 verliesGllsleeki.egekkkkeleeeeeeeeaeke 92 
                 ++  +++ +  +++++ +++k+++e+e++++   + +e
  MMETSP1325-20131115|1507_1 281 FQEAVDGFITRIQKRAvDKRKEMDEEEKQRRLAGEGEE 318
                 55555555556655553444444444444222222333 PP

  == domain 4    score: 75.2 bits;  conditional E-value: 7.2e-25
   PF08564.5   1 inlPgaeslDpeeerkkrevFeslPpelqkaletkdldevnkvlakmkveeAekiverliesGlls 66 
                 +++Pg  +lDp+      evFeslP+ +q+a+e+kd+++++++l++m++ee +++++r+++sGl++
  MMETSP1325-20131115|1507_1 327 RMGPG--GLDPV------EVFESLPESMQDAFESKDMQKLQEALQQMPIEEVKYHMKRCEDSGLWV 384
                 68999..****9......***********************************************8 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7  13.1   2.9e-24   9.7e-21       3     141 ..      11     147 ..       9     162 .. 0.77
   2 ?   -1.0   4.1      0.49   1.7e+03      42     160 ..     179     309 ..     133     313 .. 0.52
   3 ?    2.9   1.9     0.033   1.1e+02      62     139 ..     289     365 ..     269     380 .. 0.71

  Alignments for each domain:
  == domain 1    score: 74.7 bits;  conditional E-value: 2.9e-24
   PF03234.9   3 dYskWdkiElSDDsDvevHPNvDkkSfirwkqqaihekreqrkkeieelekelkinkkllervdkllselkee.eelssekvlkklneeadkedkasveeeeeeqpkynemledLldqv..kdevdekkaaklieelkkhrk 141
                  YskWd+iElSDD+  + HPN+Dk S +r k+++++e+ e+ ++e+++l ++ k  +++l++v+++l+e +ee ++   e+ +k l+ +  k++k  +e e +++ + ++m + + ++    ++ d++k+++    l +h  
  MMETSP1325-20131115|1507_1  11 KYSKWDNIELSDDES-DCHPNIDKDSWFRMKHRSRVEREENEDAEKQKLTAQNKGDEERLAEVRERLAEEEEEeDKEALEEEIKDLEASIAKRQKRLDEMEANKKWNVDNMCHVVEERTivSNKSDTTKTSE----LPAHLV 147
                 5*************9.****************************************************9998844445566777777777788888888888888888888765544323355555544333....333333 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.49
   PF03234.9  42 eqrkkeieelekelkinkkllervdkllselkee...eelssekvlkklneeadkedka..sveeeeeeqpkynemledLldqv........kdevdekkaaklieelkkhrkklkkeekelekkleeleke 160
                 +++ +e e+l  ++ i  + +e++++l++   +    e++ss  +l+ l+ee++ + +   +v+++ +   + +e+ ++L +          +   ++++ + + e++    ++++k+  + +k+++e ek+
  MMETSP1325-20131115|1507_1 179 ADFVNEYEDLLEKY-IDTHSMEECKQLMHMNGDVllqENASSYLLLSCLEEEMNGNHEKmrHVARQSQILSHITELAASLKRAPrdvvlpffNRIAEDEHRRGFQEAVDGFITRIQKRAVDKRKEMDEEEKQ 309
                 44444444443333.334455555555554433222133444444555544443332222222222222223333333332211333444443333334456667777777777777777777777776665 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.033
   PF03234.9  62 lervdkllselkeeeelssekvlkklneeadkedkasveeeeeeqpkynemledLldqvkdevdekkaaklieelkkh 139
                 ++r++k+  + ++e  +++ek  + + e +++ + +++e+  +      e+ e+L + ++d+ ++k+++kl e+l+++
  MMETSP1325-20131115|1507_1 289 ITRIQKRAVDKRKE-MDEEEKQRRLAGEGEEEVELSKEERMGPGGLDPVEVFESLPESMQDAFESKDMQKLQEALQQM 365
                 56666666555554.233344445555666666777888899999999999999999999999999988888888764 PP

>> PF08565.6  Cdc37 Hsp90 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   2.4       0.1   3.6e+02     134     166 ..      75     108 ..      56     116 .. 0.78
   2 !   70.9   1.8   2.3e-23   7.8e-20      58     173 .]     194     307 ..     132     309 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.1
   PF08565.6 134 kitakaepeakeaFleevqatkeriktRakel.m 166
                 ++ +++e+e kea +ee+++ +  i +R k l  
  MMETSP1325-20131115|1507_1  75 RLAEEEEEEDKEALEEEIKDLEASIAKRQKRLdE 108
                 6677778888999999999999999999888742 PP

  == domain 2    score: 70.9 bits;  conditional E-value: 2.3e-23
   PF08565.6  58 kagdykesekFLlehpe.ivsEqqkdaLvieafdlqleekeelaeqvvHQsillqYileLakslkvdpraviklFFkkitakaepeakeaFleevqatkeriktRakelmeeseeee 173
                 ++  ++e+++ +  +   ++ E+   +L++++++ ++++++e++++v+ Qs +l+ i eLa slk  pr+v+  FF++i + +e   +  F+e v  +  ri++Ra  + +e +eee
  MMETSP1325-20131115|1507_1 194 DTHSMEECKQLMHMNGDvLLQENASSYLLLSCLEEEMNGNHEKMRHVARQSQILSHITELAASLKRAPRDVVLPFFNRIAE-DE--HRRGFQEAVDGFITRIQKRAVDKRKEMDEEE 307
                 45567777777655544167899999*******************************************************.33..479********************77766664 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   4.6   1.8e-07   0.00061      11      89 ..      45     120 ..      38     140 .. 0.77
   2 ?   -2.6   0.0       1.4   4.7e+03      51      68 ..     241     258 ..     226     260 .. 0.63
   3 ?    0.3   0.1      0.17   5.8e+02      37      51 ..     296     310 ..     285     321 .. 0.75
   4 ?   -1.4   0.2      0.56   1.9e+03      59      69 ..     354     364 ..     341     375 .. 0.57

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 1.8e-07
   PF14282.1  11 sassgssdsqiksLqkqiqsltkqlkelssdeeltaeekqkqqqliqqQIqalqaQiaqlqsqqseeaqqsqessvedk 89 
                  + ++++d++ ++L+ q +  ++ l e+ +   l +ee ++ +++++++I++l+a ia++q+  +e +++++ + v+++
  MMETSP1325-20131115|1507_1  45 VEREENEDAEKQKLTAQNKGDEERLAEVRE--RLAEEEEEEDKEALEEEIKDLEASIAKRQKRLDEMEANKKWN-VDNM 120
                 4567889**********************9..899999************************999887666543.3333 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.4
   PF14282.1  51 kqqqliqqQIqalqaQia 68 
                 ++q++i + I++l a ++
  MMETSP1325-20131115|1507_1 241 ARQSQILSHITELAASLK 258
                 667777777777777665 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.17
   PF14282.1  37 elssdeeltaeekqk 51 
                  + + +e+++eekq 
  MMETSP1325-20131115|1507_1 296 AVDKRKEMDEEEKQR 310
                 456667888888875 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 0.56
   PF14282.1  59 QIqalqaQiaq 69 
                   q+lq  ++q
  MMETSP1325-20131115|1507_1 354 DMQKLQEALQQ 364
                 23333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2001  (0.146358); expected 273.4 (0.02)
Passed bias filter:                      534  (0.0390579); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.17u 0.37s 00:00:01.54 Elapsed: 00:00:00.86
# Mc/sec: 1072.79
//
Query:       MMETSP1325-20131115|1510_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-07   29.6   0.9      3e-07   29.4   0.6    1.1  1  PF12781.2 ATP-binding dynein motor region D5
     0.0041   16.5   0.0     0.0047   16.4   0.0    1.0  1  PF13329.1 Autophagy-related protein 2 CAD motif
  ------ inclusion threshold ------
      0.045   11.7   0.5      0.053   11.5   0.3    1.0  1  PF06419.6 Conserved oligomeric complex COG6


Domain annotation for each model (and alignments):
>> PF12781.2  ATP-binding dynein motor region D5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.6   6.6e-11     3e-07     169     227 ..       2      60 ..       1      61 [. 0.96

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 6.6e-11
   PF12781.2 169 pdleklksdltkqqnefkivlkeledsllsrlssasgnflgdtalvenleitkrtaaei 227
                 p+l + k++l  q+ e +  l ++e  +l +ls+a+gn+l dtal+e l  +k t+ ei
  MMETSP1325-20131115|1510_1   2 PELAERKTELVVQNAESNKQLYDIESLILLKLSTAEGNILDDTALIETLAEAKATSEEI 60 
                 899999**************************************************998 PP

>> PF13329.1  Autophagy-related protein 2 CAD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0     1e-06    0.0047      18      96 ..       7      88 ..       1      93 [. 0.83

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1e-06
   PF13329.1 18 skllvvltkatlsvslkdeqfeiklslrkaslllIDDvknlkk..eeeskrrkaksskskqvqsllslll.kkGyvsvgkis 96
                 k  +v+++a+++ +l d ++ i l+l+ a+  + DD++ +++  e +++++++k++  ++  +  +++  ++Gy +v++  
  MMETSP1325-20131115|1510_1  7 RKTELVVQNAESNKQLYDIESLILLKLSTAEGNILDDTALIETlaEAKATSEEIKAKMAEAEVTTKEIFDtSEGYRPVAYRA 88
                58889***********888888********************9866666668888888888777788886599***999865 PP

>> PF06419.6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   1.2e-05     0.053     319     382 ..       8      71 ..       5      79 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.2e-05
   PF06419.6 319 RveqviqseeeavtlykianLlefYksmfskllgddsaLvetlkdLeksakkkfislledqvat 382
                 + e v+q  e    ly+i +L+ +  s+ + ++ dd aL+etl++ ++++++  +++ e++v+t
  MMETSP1325-20131115|1510_1   8 KTELVVQNAESNKQLYDIESLILLKLSTAEGNILDDTALIETLAEAKATSEEIKAKMAEAEVTT 71 
                 689***********************************************99999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       713  (0.0521504); expected 273.4 (0.02)
Passed bias filter:                      538  (0.0393505); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 488.86
//
Query:       MMETSP1325-20131115|1511_1  [L=846]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-57  194.5   0.0    6.3e-57  193.0   0.0    1.7  2  PF00656.17 Caspase domain
    5.8e-11   41.9   4.3    6.3e-11   41.8   1.1    2.4  2  PF00397.21 WW domain
    9.6e-08   31.2   0.0    1.6e-07   30.5   0.0    1.4  1  PF02845.11 CUE domain
     0.0011   18.6   0.2     0.0026   17.4   0.1    1.7  1  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
       0.11   11.7   0.0       0.33   10.2   0.0    1.7  1  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF00656.17  Caspase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.69   1.9e+03     183     242 ..      66     119 ..      54     126 .. 0.69
   2 !  193.0   0.0   2.3e-60   6.3e-57       1     246 [.     424     669 ..     424     672 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.69
                 CEC...TT---HHHHHHHHHHHHHTTTH.HHTTTSBHHHHHHHHHHHHHTSC---EEEEE CS
  PF00656.17 183 adaagkteaggaftqalqqvlketnekgeitnkelvlnarltlvkqkvaqkkqrPglscs 242
                 a++  +  +++a++ +++ +l      +  ++ +  l+ + ++v q +a+    P+ s+s
  MMETSP1325-20131115|1511_1  66 AET--QAASQSAEVSSIVAIL----PHVTSSQAKAALERSNNNVEQAIASLLSDPTPSSS 119
                 344..7889999999999999....33445677788888888888887755555555555 PP

  == domain 2    score: 193.0 bits;  conditional E-value: 2.3e-60
                 -EEEEEE----SST------HHHHHHHHHHH.HHTT-EEEE....EES........--HHHHHHHHHHHHTCSGTBS-EEEEEEE----...B----BE-SSSE-B-HHH......HHHTTSTTT-GGGTTS-E.EEEEES---EETB---EEE-S--SSS--B-------SS--CEE--TTTSEEEEESSSTEE-CCEC.....TT---HHHHHHHHHHHHHTTTH.HHTTTSBHHHHHHHHHHHHHTSC---EEEEEE-SS CS
  PF00656.17   1 kkAllIginyfgtkaeLrGcvnDvermaklL.krlgFeveni..lidd........ptgknirkalkelvksaksgDvlvvhysGHGtrvpaegededtgydecivpvdkn...lildddfrdlvckslpekpk.tiilDaChsgglideakeqigestkkktkkssereeegagsskgplpadgillsgcqtdqtSadaag..kteaggaftqalqqvlketnekgeitnkelvlnarltlvkqkvaqkkqrPglscsdltk 246
                 ++AllIg+ny gt a L GcvnDv+++++lL + +g+ +++i  l+dd        pt++n++  +++l++   +gDvl++ +sGHG + ++  + e +g++e+++p+d++   +i+dd+++ l+  +lp++++ t+++D+Chsg+ +d++++  ++s           ++ +  ++  ++  d+ ++sgc++d tS daa   +++ gga+t+al++vl+ +    +  ++ ++l +++ +v+++     q+P+l +s +++
  MMETSP1325-20131115|1511_1 424 RRALLIGCNYAGTRAALGGCVNDVHNLRRLLtETYGWPQDCIrvLTDDgaggqrrmPTRANMLASMRWLAEGVSPGDVLFFSFSGHGAQKEDPHGYEEDGMNETVLPCDFKsagMITDDEINRLIVAPLPSGVRlTAVMDSCHSGTGMDLPYTWVERS-----------QRWKEETNPLHTSGDVQMISGCADDDTSCDAANrqTGMMGGAMTTALCEVLRSN----PCPSYSELLTSMRQTVRRRG--FHQVPQLTSSQRFD 669
                 69*****************************************99999***************************************997777999*********************************************************96655...........67899**************************5446****************444....66788888888888887765..5******9998876 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   1.1   2.3e-14   6.3e-11       1      31 []      33      62 ..      33      62 .. 0.97
   2 ?   -0.6   0.0      0.41   1.1e+03       2      15 ..     154     165 ..     153     166 .. 0.82

  Alignments for each domain:
  == domain 1    score: 41.8 bits;  conditional E-value: 2.3e-14
                ---SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  1 lppgWeersddddGrvYYyNheTgetqWekP 31
                lp gWe+r+d + G +Y+++h+T++t+We+P
  MMETSP1325-20131115|1511_1 33 LPAGWEKRFDAN-GTPYFVDHNTKTTHWEPP 62
                799******999.*****************9 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.41
                 --SEEE.E.E---- CS
  PF00397.21   2 ppgWeersddddGr 15 
                 p+gW ++++ + Gr
  MMETSP1325-20131115|1511_1 154 PNGWFRHFT-E-GR 165
                 899*99996.7.98 PP

>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0     6e-11   1.6e-07       3      41 ..      75     113 ..      73     114 .. 0.93

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 6e-11
                 HHHHHHHHHSTTS-HHHHHHHHHHSTTTHHHHHHHHHHC CS
  PF02845.11   3 qmletLkemFPdldeevIravLrasngnvEaainaLLeg 41 
                 ++++++  + P++++++ +a+L++sn+nvE+ai +LL++
  MMETSP1325-20131115|1511_1  75 AEVSSIVAILPHVTSSQAKAALERSNNNVEQAIASLLSD 113
                 68999999*****************************85 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.1   9.5e-07    0.0026      17      35 ..      90     108 ..      87     110 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 9.5e-07
                 HHHHHHHHHTTTSHHHHHH CS
  PF00627.26  17 eeakkALratnnnvErAve 35 
                 ++ak AL+++nnnvE+A+ 
  MMETSP1325-20131115|1511_1  90 SQAKAALERSNNNVEQAIA 108
                 69***************95 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00012      0.33       5      24 ..     198     217 ..     195     219 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00012
                 HHHHHCTTTSSEBEHHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfke 24 
                 +++efD Dg G+I+  Ef +
  MMETSP1325-20131115|1511_1 198 LWAEFDHDGGGTIDQGEFSR 217
                 689***************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (846 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.26u 0.34s 00:00:01.60 Elapsed: 00:00:00.65
# Mc/sec: 3118.95
//
Query:       MMETSP1325-20131115|1512_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-09   36.1   0.1    9.1e-09   35.3   0.0    1.4  1  PF00106.20 short chain dehydrogenase
    0.00015   21.5   0.1    0.00019   21.1   0.1    1.2  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.3e-12   9.1e-09     110     163 ..       2      59 ..       1      63 [. 0.94

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 1.3e-12
                 HHTHHHHHHHHHHHH....HH---EEEEEECHHHHSSTT.HHHHHHHCHHHCCHHHHH CS
  PF00106.20 110 pkvtgawllheltld....adlgafvlfSSvagvlgspgqaaYaaakaaldalaesrr 163
                 ++ +g++ +++++l+    +++ga++++SS++g+   p  ++Y+a+ka+++++++s +
  MMETSP1325-20131115|1512_1   2 INCEGTVKMTRAVLPtliaKKKGAIINISSASGTHATPMLTVYSATKAFINQFSHSVA 59 
                 7999************99888**********************************987 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.1   2.8e-08   0.00019     108     175 ..       3      69 ..       1      90 [. 0.93

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 2.8e-08
                 HTHHHHHHHHHHGG..GB-----EEEEEE-------------------THHHHHHHHHH----S---E CS
   PF13561.1 108 sayslvsllkaalpknlmneggSivalsylaservipgyggmsvaKAaLEsltRvlAvelgrkkgiRv 175
                 ++   v++++a+lp  + +++g+i+ +s     +++p  + +s+ KA + +   ++A+e+ + +g+ +
  MMETSP1325-20131115|1512_1   3 NCEGTVKMTRAVLPTLIAKKKGAIINISSASGTHATPMLTVYSATKAFINQFSHSVAWEAKE-HGVDI 69 
                 666789*******************************************************9.99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.59
# Mc/sec: 629.55
//
Query:       MMETSP1325-20131115|1513_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-05   23.3   0.0    6.9e-05   22.5   0.0    1.5  1  PF13180.1  PDZ domain
    4.3e-05   23.4   0.0    7.5e-05   22.7   0.0    1.4  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)


Domain annotation for each model (and alignments):
>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0     1e-08   6.9e-05      13      69 ..      55     113 ..      23     123 .. 0.84

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 1e-08
   PF13180.1  13 trgvlvvsVkessPaakaglkpGDiilkvdgkkvksltdlkslll..kkkpGdtvkltv 69 
                 ++++++ +Vk+++ aa+ g+k+G ++++v+ ++v++ ++l++++   +++  + v lt+
  MMETSP1325-20131115|1513_1  55 DNELYIRKVKPGGQAAQLGVKKGWKLTHVNRVAVSDEPSLNRAVEeiRASHETVVPLTF 113
                 5699*************************************999755666666666665 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   1.1e-08   7.5e-05      23      79 ..      53     112 ..      34     114 .. 0.86

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 1.1e-08
                 S.SSSEEEEESTTT.HHTTTTSBSTTCEEEEETTEBGTTS.HHHHHHHHHHTHHS.EEEEE CS
  PF00595.19  23 r.dkgifvsevvpg.gaaeagglkeGDkIlsvNgvdvenv.shdeavqaikgkkg.evtLt 79 
                 r d+++++ +v pg  aa+ g +k+G k++ vN v v++  s+ +av++i+ +++ +v+Lt
  MMETSP1325-20131115|1513_1  53 RhDNELYIRKVKPGgQAAQLG-VKKGWKLTHVNRVAVSDEpSLNRAVEEIRASHEtVVPLT 112
                 3689**********6666666.****************99899***********9888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 779.91
//
Query:       MMETSP1325-20131115|1516_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 768.64
//
Query:       MMETSP1325-20131115|1518_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      9e-32  108.2   0.1    3.8e-13   48.5   0.0    2.8  3  PF13475.1 Domain of unknown function (DUF4116)


Domain annotation for each model (and alignments):
>> PF13475.1  Domain of unknown function (DUF4116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   1.6e-11   2.3e-07       5      46 ..       1      38 [.       1      45 [. 0.83
   2 !   36.8   0.0   1.3e-13   1.8e-09      15      49 .]      36      70 ..      32      70 .. 0.95
   3 !   48.5   0.0   2.8e-17   3.8e-13       1      36 [.      47      82 ..      47      83 .] 0.98

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 1.6e-11
   PF13475.1  5 vleavkkngsalkylseeLknDkeivlkAvkqngsalsyase 46
                vl+av+++  al+y+s eL++D+ei l+A++    ++ +a++
  MMETSP1325-20131115|1518_1  1 VLAAVQQDVHALQYASVELRSDREINLAAMQ----PYLHAPK 38
                89****************************9....5544444 PP

  == domain 2    score: 36.8 bits;  conditional E-value: 1.3e-13
   PF13475.1 15 alkylseeLknDkeivlkAvkqngsalsyaseeLr 49
                a ky+s eL++D+e+v +Av+q+ sal+yas eLr
  MMETSP1325-20131115|1518_1 36 APKYASAELRSDREFVQAAVEQDWSALEYASVELR 70
                679******************************98 PP

  == domain 3    score: 48.5 bits;  conditional E-value: 2.8e-17
   PF13475.1  1 DrEivleavkkngsalkylseeLknDkeivlkAvkq 36
                DrE+v +av++++sal+y+s eL++D+eivl+Avkq
  MMETSP1325-20131115|1518_1 47 DREFVQAAVEQDWSALEYASVELRSDREIVLAAVKQ 82
                9**********************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 342.93
//
Query:       MMETSP1325-20131115|1515_1  [L=475]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-13   49.3   0.1      9e-13   47.9   0.0    1.8  2  PF13815.1 Iguana/Dzip1-like DAZ-interacting protein N-terminal
  ------ inclusion threshold ------
      0.067   12.2   0.4      0.088   11.8   0.3    1.1  1  PF04890.8 Family of unknown function (DUF648)
      0.097   12.8   1.2       0.38   10.9   0.8    2.0  1  PF10404.4 Rad4 beta-hairpin domain 2
        2.2    7.0   7.8       0.14   11.0   0.8    1.9  2  PF10186.4 UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF13815.1  Iguana/Dzip1-like DAZ-interacting protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   2.6e-16     9e-13       1     112 [.      17     127 ..      17     133 .. 0.92
   2 ?   -2.9   0.0       1.4   4.9e+03      68     100 ..     333     366 ..     332     369 .. 0.73

  Alignments for each domain:
  == domain 1    score: 47.9 bits;  conditional E-value: 2.6e-16
   PF13815.1   1 fqFrqrsekiDwrklasidvdkiakeldvdtLqenvenitfcklekekatklvdpellklfrlaqLiieYLlhlqeiLtqslseleeklkeklqeaeereqelskqeeelks 112
                 f+F+  s +iDw +la  +v ++ +  d  +L + +  +++ +  ++ +++ + ++ lk f++ qL  +YLl + + + +  +e+e +l + ++  e  + + +  +e+++ 
  MMETSP1325-20131115|1515_1  17 FHFERASSRIDWDRLAGTNVASLQRRGDAAMLGKFIGDVAMGNARGDPEME-THQTHLKAFEMLQLQTQYLLFCHQTMRERHAEVERRLAKLQSHEEAYKRKAAVRKEKIRA 127
                 89******************************************9998877.889999********************************9999888888877777777765 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.4
   PF13815.1  68 ieYLl.hlqeiLtqslseleeklkeklqeaeere 100
                 +eY++ h+ ++L++s  + +++ +e +    e+e
  MMETSP1325-20131115|1515_1 333 LEYMVvHVGAMLSDSEGSETDDGSEYEDDESETE 366
                 6898879999999998888887776666555555 PP

>> PF04890.8  Family of unknown function (DUF648)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   2.6e-05     0.088     119     242 ..      67     187 ..      50     232 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.6e-05
   PF04890.8 119 ektsqkvasilvlsvlvdvseeklqelkknpeavekavrtskkeFsevkkkdylrdilthvigyllsleeelkdlvldesdlsqstlnleseldltlkadkrsiekklrellnees.Kksklkev 242
                 e++  + + +  l+   +++    q ++++  +ve   r+ k + s++++ ++  +++++ i+  l  + +++d vl++++      ++e+     +++d r+++++ + l      K +++k+ 
  MMETSP1325-20131115|1515_1  67 ETHQTHLKAFEMLQLQTQYLLFCHQTMRERHAEVER--RLAKLQ-SHEEAYKRKAAVRKEKIR-ALAADAQAQDDVLQSYHAMLEMADPEKAARIAWTDDGRVVLQEKQPLRRTRRhKAAQKKFA 187
                 566666666666666666777788999999999998..555555.5588888999999*****.****************************************866554443333344444433 PP

>> PF10404.4  Rad4 beta-hairpin domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.8   0.00011      0.38       6      39 ..     158     192 ..     155     212 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00011
                 HHHT---EE------SEEEE-...........--- CS
   PF10404.4   6 rWksegRvikageqPlKkvksral.qarikqltra 39 
                  W  +gRv+  + qPl++  +++  q++  + +++
  MMETSP1325-20131115|1515_1 158 AWTDDGRVVLQEKQPLRRTRRHKAaQKKFAKAQQE 192
                 5999************6655533323322222222 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.8     4e-05      0.14      54     111 ..      86     144 ..      38     157 .. 0.74
   2 ?   -0.5   0.5      0.12   4.1e+02      88     128 ..     168     206 ..     160     212 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 4e-05
   PF10186.4  54 kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.asa 111
                      q+++ ++a+ ++r+++++++ e++k++  +++e+i++l ++ + +   l+ ++a
  MMETSP1325-20131115|1515_1  86 LLFCHQTMRERHAEVERRLAKLQSHEEAYKRKAAVRKEKIRALAADAQAQDDVLQsYHA 144
                 44556777788888888888888888888888888888888887777777766664444 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.12
   PF10186.4  88 qkrerieelkealaqrrsdleasaqlekrraeqlaklqeei 128
                 q+++ +++ ++  a +++ ++  aq+e+r  ++++k  e+i
  MMETSP1325-20131115|1515_1 168 QEKQPLRRTRRHKAAQKKFAK--AQQETRWVRDVEKAAESI 206
                 444444444444445455544..899999999999887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       820  (0.0599766); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.83u 0.36s 00:00:01.19 Elapsed: 00:00:00.64
# Mc/sec: 1778.55
//
Query:       MMETSP1325-20131115|1519_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 368.33
//
Query:       MMETSP1325-20131115|1517_1  [L=644]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-23   80.0   6.8    7.7e-07   27.8   0.1    4.7  5  PF00036.27 EF hand
    9.9e-23   79.9   1.8    5.2e-10   39.2   0.1    3.2  3  PF13499.1  EF-hand domain pair
    2.3e-22   76.6   6.3    0.00058   19.4   0.0    5.4  5  PF13405.1  EF-hand domain
    1.6e-15   55.5   8.7    0.00017   20.6   0.0    4.4  4  PF13202.1  EF hand
    2.1e-14   52.7   7.7      4e-07   29.4   0.9    4.5  4  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
       0.02   14.7   0.0       0.25   11.2   0.0    2.2  3  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
      0.023   14.3   0.9       0.54    9.9   0.0    2.9  3  PF12763.2  Cytoskeletal-regulatory complex EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.9   3.7e+03       2      18 ..      34      50 ..      33      51 .. 0.85
   2 !   12.4   0.0   3.3e-05     0.064       5      26 ..     489     510 ..     486     512 .. 0.87
   3 !   24.8   0.1   3.7e-09   7.2e-06       2      28 ..     522     548 ..     521     549 .. 0.92
   4 !   15.2   0.2   4.4e-06    0.0087       5      28 ..     559     582 ..     556     583 .. 0.91
   5 !   27.8   0.1     4e-10   7.7e-07       2      27 ..     592     617 ..     591     618 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.9
                HHHHHHHHCTTTSSEBE CS
  PF00036.27  2 lkeaFkefDkDgdGkIs 18
                l +aF   D+ g+G +s
  MMETSP1325-20131115|1517_1 34 LLRAFHYHDQAGTGLVS 50
                67899999*99999987 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 3.3e-05
                 HHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfkeal 26 
                 +F +fD+D +G+++++E  +al
  MMETSP1325-20131115|1517_1 489 VFGLFDRDANGTLDLDEATDAL 510
                 6999*************76665 PP

  == domain 3    score: 24.8 bits;  conditional E-value: 3.7e-09
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++ +++++D++gdG ++ +Ef +++ +
  MMETSP1325-20131115|1517_1 522 VRAIISKYDRNGDGLLDIDEFSRLMVE 548
                 799*********************976 PP

  == domain 4    score: 15.2 bits;  conditional E-value: 4.4e-06
                 HHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfkealkk 28 
                 +Fk fD  gdG+I   E+ ++l+ 
  MMETSP1325-20131115|1517_1 559 VFKAFDISGDGFIGEFELGQILAQ 582
                 7*******************9986 PP

  == domain 5    score: 27.8 bits;  conditional E-value: 4e-10
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 l e+++++D++gdGk+++ Ef ++++
  MMETSP1325-20131115|1517_1 592 LAEIIRKVDTNGDGKLDYGEFARMMA 617
                 789*********************96 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.026        50       1      32 [.      33      64 ..      33     109 .. 0.82
   2 !   34.4   0.2   8.4e-12   1.6e-08       5      66 .]     489     546 ..     483     546 .. 0.89
   3 !   39.2   0.1   2.7e-13   5.2e-10       5      66 .]     559     616 ..     552     616 .. 0.93

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.026
   PF13499.1  1 klkeaFkllDkdgdgyldkeeLlrllkhlgse 32
                +l +aF  +D+ g+g ++   + ++l +lg +
  MMETSP1325-20131115|1517_1 33 QLLRAFHYHDQAGTGLVSAFRMGQVLSQLGVH 64
                6899*************999988888888855 PP

  == domain 2    score: 34.4 bits;  conditional E-value: 8.4e-12
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                 +F l+D+d +g+ld +e + +l  +g      e+++ +++i+ ++D ngdG+l+ +Ef  ++
  MMETSP1325-20131115|1517_1 489 VFGLFDRDANGTLDLDEATDALMWAG----FAETPRDVRAIISKYDRNGDGLLDIDEFSRLM 546
                 5889**********************....66777777777*****************9876 PP

  == domain 3    score: 39.2 bits;  conditional E-value: 2.7e-13
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                 +Fk++D +gdg++   eL ++l ++g    +   ++ l +i++++D+ngdG+l++ Ef+ ++
  MMETSP1325-20131115|1517_1 559 VFKAFDISGDGFIGEFELGQILAQMG----QVVNENDLAEIIRKVDTNGDGKLDYGEFARMM 616
                 6*************************....88888888888*****************9987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0003      0.59       2      30 ..      34      61 ..      33      66 .. 0.90
   2 !   17.4   0.1   1.3e-06    0.0025       4      27 ..     488     511 ..     485     514 .. 0.91
   3 !   14.6   0.1   9.8e-06     0.019       3      26 ..     523     546 ..     521     552 .. 0.85
   4 !   19.4   0.0     3e-07   0.00058       2      28 ..     556     582 ..     555     588 .. 0.90
   5 !   14.1   0.1   1.5e-05     0.029       4      27 ..     594     617 ..     591     622 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0003
                HH---GCC-------B---HHHHHHH.H- CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrksl 30
                l +aF+ +D+ g+G ++a  ++++L++ l
  MMETSP1325-20131115|1517_1 34 LLRAFHYHDQAGTGLVSAFRMGQVLSQ-L 61
                679*********************994.4 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 1.3e-06
                 ---GCC-------B---HHHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                 ++F lfD+d +G++d++E  daL 
  MMETSP1325-20131115|1517_1 488 YVFGLFDRDANGTLDLDEATDALM 511
                 79****************999985 PP

  == domain 3    score: 14.6 bits;  conditional E-value: 9.8e-06
                 H---GCC-------B---HHHHHH CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaL 26 
                 r++  ++D++gdG +d++E+ +++
  MMETSP1325-20131115|1517_1 523 RAIISKYDRNGDGLLDIDEFSRLM 546
                 667789**************9987 PP

  == domain 4    score: 19.4 bits;  conditional E-value: 3e-07
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 + ++Fk+fD  gdG+i   EL+++L +
  MMETSP1325-20131115|1517_1 556 MISVFKAFDISGDGFIGEFELGQILAQ 582
                 6789********************984 PP

  == domain 5    score: 14.1 bits;  conditional E-value: 1.5e-05
                 ---GCC-------B---HHHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                 e+ ++ D++gdGk+d  E+ +++ 
  MMETSP1325-20131115|1517_1 594 EIIRKVDTNGDGKLDYGEFARMMA 617
                 566899***************996 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.1    0.0019       3.6       5      20 ..     490     505 ..     485     511 .. 0.89
   2 !   20.3   0.1   1.1e-07   0.00022       3      25 .]     524     546 ..     522     547 .. 0.88
   3 !   10.7   0.1   0.00012      0.24       3      23 ..     558     578 ..     556     581 .. 0.82
   4 !   20.6   0.0   8.9e-08   0.00017       5      25 .]     596     616 ..     592     616 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0019
                 HHHH--S----B-HHH CS
   PF13202.1   5 FrafDlNgDGkIsreE 20 
                 F  fD +  G+++ +E
  MMETSP1325-20131115|1517_1 490 FGLFDRDANGTLDLDE 505
                 889************9 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 1.1e-07
                 HHHHHH--S----B-HHHHHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkrlv 25 
                 ++ +++D NgDG ++++E++rl+
  MMETSP1325-20131115|1517_1 524 AIISKYDRNGDGLLDIDEFSRLM 546
                 56789****************86 PP

  == domain 3    score: 10.7 bits;  conditional E-value: 0.00012
                 HHHHHH--S----B-HHHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkr 23 
                 ++F+afD  gDG+I   EL +
  MMETSP1325-20131115|1517_1 558 SVFKAFDISGDGFIGEFELGQ 578
                 68************8777765 PP

  == domain 4    score: 20.6 bits;  conditional E-value: 8.9e-08
                 HHHH--S----B-HHHHHHHH CS
   PF13202.1   5 FrafDlNgDGkIsreELkrlv 25 
                  r++D+NgDGk++  E+ r++
  MMETSP1325-20131115|1517_1 596 IRKVDTNGDGKLDYGEFARMM 616
                 699**************9986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.0      0.01        19      31      46 ..     490     505 ..     484     510 .. 0.89
   2 !   16.4   0.0   2.3e-06    0.0045      26      53 ..     521     548 ..     518     549 .. 0.91
   3 ?    4.5   0.2     0.012        23      30      46 ..     559     575 ..     557     578 .. 0.91
   4 !   29.4   0.9     2e-10     4e-07       2      52 ..     568     617 ..     567     619 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.01
   PF13833.1  31 frefDtdgdGkisfeE 46 
                 f +fD+d +G ++++E
  MMETSP1325-20131115|1517_1 490 FGLFDRDANGTLDLDE 505
                 568************9 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 2.3e-06
   PF13833.1  26 evdilfrefDtdgdGkisfeEFcvller 53 
                 +v++++++ D++gdG ++ +EF +l+++
  MMETSP1325-20131115|1517_1 521 DVRAIISKYDRNGDGLLDIDEFSRLMVE 548
                 799***********************86 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.012
   PF13833.1  30 lfrefDtdgdGkisfeE 46 
                 +f++fD+ gdG i++ E
  MMETSP1325-20131115|1517_1 559 VFKAFDISGDGFIGEFE 575
                 69**********99988 PP

  == domain 4    score: 29.4 bits;  conditional E-value: 2e-10
   PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvlle 52 
                 +G I   eL  +la +g+  ++e+++ +++r++Dt+gdGk+++ EF ++++
  MMETSP1325-20131115|1517_1 568 DGFIGEFELGQILAQMGQV-VNENDLAEIIRKVDTNGDGKLDYGEFARMMA 617
                 6778888888999888999.******************************7 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.26     5e+02      56     111 ..     486     543 ..     464     545 .. 0.71
   2 ?    0.4   0.0       0.3   5.9e+02      61      82 ..     527     548 ..     505     559 .. 0.79
   3 ?   11.2   0.0   0.00013      0.25      59     111 ..     559     613 ..     544     615 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.26
   PF10591.4  56 veWkFnqlDtnkdkvlsksElap..lraplvklehCikeffksCDadkdkkisleEWc 111
                 + + F  +D ++++ l+  E ++  + a + +  + ++  +++ D + d+ ++++E++
  MMETSP1325-20131115|1517_1 486 ALYVFGLFDRDANGTLDLDEATDalMWAGFAETPRDVRAIISKYDRNGDGLLDIDEFS 543
                 5566777777777777777765422556666667777888888888888888888885 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.3
   PF10591.4  61 nqlDtnkdkvlsksElaplrap 82 
                 ++ D n d++l+  E++ l  +
  MMETSP1325-20131115|1517_1 527 SKYDRNGDGLLDIDEFSRLMVE 548
                 5678888888888888877655 PP

  == domain 3    score: 11.2 bits;  conditional E-value: 0.00013
   PF10591.4  59 kFnqlDtnkdkvlsksElaplrapl..vklehCikeffksCDadkdkkisleEWc 111
                  F+ +D   d+++ + El ++ a++  v +e+  +e +++ D++ d+k++  E++
  MMETSP1325-20131115|1517_1 559 VFKAFDISGDGFIGEFELGQILAQMgqVVNENDLAEIIRKVDTNGDGKLDYGEFA 613
                 699*********************99999************************97 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.41     8e+02      47      65 ..     488     506 ..     477     513 .. 0.81
   2 ?    0.3   0.0      0.25   4.9e+02      52      69 ..     529     546 ..     519     551 .. 0.79
   3 ?    9.9   0.0   0.00028      0.54      40      71 ..     587     618 ..     557     620 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.41
   PF12763.2  47 kiwdladidedgkldfeef 65 
                  ++ l d d +g+ld++e 
  MMETSP1325-20131115|1517_1 488 YVFGLFDRDANGTLDLDEA 506
                 578899**********996 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.25
   PF12763.2  52 adidedgkldfeefciam 69 
                  d + dg ld +ef   m
  MMETSP1325-20131115|1517_1 529 YDRNGDGLLDIDEFSRLM 546
                 57789*********8665 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00028
   PF12763.2  40 leedklekiwdladidedgkldfeefciamrl 71 
                 ++e+ l++i    d + dgkld+ ef+ +m l
  MMETSP1325-20131115|1517_1 587 VNENDLAEIIRKVDTNGDGKLDYGEFARMMAL 618
                 67899*********************999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (644 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.98u 0.38s 00:00:01.36 Elapsed: 00:00:00.67
# Mc/sec: 2303.36
//
Query:       MMETSP1325-20131115|1522_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.57
# Mc/sec: 995.73
//
Query:       MMETSP1325-20131115|1523_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.32   11.2   7.1        8.2    6.7   0.7    3.1  3  PF05957.8  Bacterial protein of unknown function (DUF883)
        5.4    7.4   8.1        3.1    8.2   0.8    3.1  3  PF07743.8  HSCB C-terminal oligomerisation domain


Domain annotation for each model (and alignments):
>> PF05957.8  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.047   3.2e+02      38      78 ..      20      58 ..       3      60 .. 0.63
   2 ?    6.7   0.7    0.0012       8.2      12      54 ..      75     117 ..      71     122 .. 0.87
   3 ?    4.8   0.2    0.0049        33       2      37 ..     157     195 ..     147     198 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.047
   PF05957.8 38 ealerarerlrdaedavrerakeaaeaadeyVrenPwqavG 78
                +al++ r+++r +++a  ++   a+  a + Vr++ + ++G
  MMETSP1325-20131115|1523_1 20 DALRDFRHEVRTTMRAGGDK--GAVLGACDRVRDEVLPSLG 58
                45667777777776655544..4566666777777666666 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0012
   PF05957.8  12 adleellksaadeageeaeelReraeealerarerlrdaedav 54 
                 +d + llk+ +++ + eae+  ++  +++e+ar++l dae a+
  MMETSP1325-20131115|1523_1  75 EDPKVLLKEIEEKKQAEAEAKAAKKGKEIEKARKKLVDAEAAA 117
                 6777899999999999999999999999*******99999876 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.0049
   PF05957.8   2 eleaeletlladleellksaadeag...eeaeelRerae 37 
                 +l++e+++  ++ e+ll +a++ ++   e++e+lR+++ 
  MMETSP1325-20131115|1523_1 157 KLKKEVDQQKKKHEKLLGEAGKAGKalpEYIEDLRNKLA 195
                 678889999999999999888877644467788887775 PP

>> PF07743.8  HSCB C-terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       0.3   2.1e+03      25      41 ..      17      34 ..      11      36 .. 0.77
   2 ?    1.4   0.5     0.058     4e+02      21      41 ..      88     108 ..      62     118 .. 0.54
   3 ?    8.2   0.8   0.00046       3.1      25      51 ..     150     177 ..     143     198 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.3
   PF07743.8 25 dd.ealeelkkevearik 41
                +  +al+++++ev+  ++
  MMETSP1325-20131115|1523_1 17 PYlDALRDFRHEVRTTMR 34
                555899999999998776 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.058
   PF07743.8  21 qasdddealeelkkevearik 41 
                 ++++ +++ ++  ke+e+ +k
  MMETSP1325-20131115|1523_1  88 KQAEAEAKAAKKGKEIEKARK 108
                 111222222222333333333 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.00046
   PF07743.8  25 dd.ealeelkkevearikellaelaeal 51 
                    +al++lkkev++++k+ ++ l+ea 
  MMETSP1325-20131115|1523_1 150 VAkSALKKLKKEVDQQKKKHEKLLGEAG 177
                 44589*****************999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1346  (0.0984494); expected 273.4 (0.02)
Passed bias filter:                      794  (0.0580749); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.57
# Mc/sec: 822.20
//
Query:       MMETSP1325-20131115|1527_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-13   49.8   0.0      3e-13   49.3   0.0    1.2  1  PF08031.7  Berberine and berberine like
     0.0043   16.2   0.2      0.021   14.0   0.0    1.9  2  PF02913.14 FAD linked oxidases, C-terminal domain


Domain annotation for each model (and alignments):
>> PF08031.7  Berberine and berberine like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.0   4.4e-17     3e-13       1      42 [.      65     105 ..      65     108 .. 0.96

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 4.4e-17
                 --TTS--GGGG.HHHHHHHHG.GGHHHHHHHHHHH-TT--S-- CS
   PF08031.7   1 aYvNyrdldlgarewgekYfg.gNyerLvkvKtkyDPdnvFrn 42 
                 aYvN +d++l+  +w++k++g +N++rL+ +K++ DP+++F  
  MMETSP1325-20131115|1527_1  65 AYVNEPDPELT--DWETKFWGeANFARLQSIKRALDPTELFSA 105
                 8**********..****************************75 PP

>> PF02913.14  FAD linked oxidases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1     0.051   3.5e+02      90     117 ..       6      36 ..       3      66 .. 0.65
   2 !   14.0   0.0   3.1e-06     0.021     217     245 ..      76     104 ..      73     107 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.051
                 B---E.EEECCCS-TCTCHHHHHHHTH....H CS
  PF02913.14  90 tgagdvvvaqdeaeqerlwkarkkalp....y 117
                 +ga++  +a d+++ +  ++a + +++    +
  MMETSP1325-20131115|1527_1   6 GGAAS-KIAGDATAISPAFRAAELIMEtdanW 36 
                 55666.77778888777777777777733332 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 3.1e-06
                 HHHTHHHHHHHHHHHHHHHHHH-TT--BS CS
  PF02913.14 217 awlkeekgeeglalmrriKaalDPnniLN 245
                 +w ++++ge+++a +++iK+alDP  +++
  MMETSP1325-20131115|1527_1  76 DWETKFWGEANFARLQSIKRALDPTELFS 104
                 68899*******************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 535.66
//
Query:       MMETSP1325-20131115|1529_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 261.03
//
Query:       MMETSP1325-20131115|1528_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-07   31.4   0.1    1.6e-07   30.9   0.1    1.2  1  PF00787.19 PX domain
  ------ inclusion threshold ------
       0.11   12.4   0.6       0.18   11.7   0.4    1.3  1  PF04568.7  Mitochondrial ATPase inhibitor, IATP


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.1   2.4e-11   1.6e-07      39     111 ..      16      96 ..       6      98 .. 0.90

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 2.4e-11
                 EEHHHHHHHHHHHHHHTT.TSTSTS--TTSSSHHC......GTTSHHHHHHHHHHHHHHHHHHHHSCHHHH.SHHHHHHHH CS
  PF00787.19  39 RrYsdFeeLhskLlrkfp.rlklPplPkkvlfgsv......rkkdeefiekrrkgLeeyLqrllnhpelrk.sevltsFLe 111
                 +r+s++e++h+ Ll+        Pp+P+k+ +  +      +  ++ef+++rr +L +yL++ll+  +    ++ +  F++
  MMETSP1325-20131115|1528_1  16 KRFSQLESFHDSLLQANLlAPGSPPFPDKNNLHGNwmkfndKDPNSEFVQQRRVTLSVYLNKLLEVNQNLAyDQTFMAFFD 96 
                 8***************9977789******9887779***9977789*******************9888887999999996 PP

>> PF04568.7  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.4   2.7e-05      0.18      17      57 ..     103     144 ..      89     148 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.7e-05
   PF04568.7  17 svvrafsvaarsssegetgsGagkggGg.GsireaggaFgkr 57 
                 ++    s+++ +++e+++gsGag g ++ Gs r+a ++ g +
  MMETSP1325-20131115|1528_1 103 QAALDASARTAAYHESQVGSGAGLGAASaGSGRAAPDTMGSM 144
                 555667888999***********************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 773.16
//
Query:       MMETSP1325-20131115|1531_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00032   20.1   0.1    0.00036   19.9   0.0    1.0  1  PF04511.10 Der1-like family


Domain annotation for each model (and alignments):
>> PF04511.10  Der1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   2.6e-08   0.00036     131     194 ..       5      69 ..       1      72 [. 0.80

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 2.6e-08
  PF04511.10 131 qvqinffelirvkaeylPlvllifsillkne..sllveligilsgylyfflkfnylrllfGktllk 194
                 +v +++ ++i+++   lP+v +i+ +l  +    ++ +++gi++g++y f+ + ++  ++Gk++l 
  MMETSP1325-20131115|1531_1   5 MVPMEVQFGIKIEYWLLPYVNAIVDVLQAQSvaGAVPHVLGIFTGHVYHFFTEVWPA-MGGKRYLT 69 
                 567788899999999**********9998841134689*************888876.55788876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       607  (0.0443973); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 589.87
//
Query:       MMETSP1325-20131115|1525_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-10   38.9   3.3    2.1e-08   34.2   0.5    2.7  2  PF01066.16 CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> PF01066.16  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.5   1.5e-12   2.1e-08       2      56 ..      29      81 ..      28      84 .. 0.90
   2 !    3.9   0.0    0.0042        57      55      77 ..     138     182 ..     134     205 .. 0.59

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 1.5e-12
  PF01066.16  2 lllpnivtllrlafalvaavllldgqplllallllllaailDgvDGkvARrtnqt 56
                l++pn+++++r+++ + +++ +++ ++  lal l++l +  D vDG  AR +nq 
  MMETSP1325-20131115|1525_1 29 LYVPNLIGYFRIVC-MWSSFYYAQTNY-KLALTLYVLNFAGDLVDGFAARLFNQV 81
                689***********.777777778888.8************************96 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.0042
  PF01066.16  55 qtsalGallDsliDnvtrllll.......................l 77 
                 ++s++Ga lD ++D+   l+ +                       l
  MMETSP1325-20131115|1525_1 138 KSSNYGATLDMVTDRGELLF-PslsraarrravltpngpsvstagL 182
                 6899**********632222.2234444444445555555555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.59
# Mc/sec: 1283.47
//
Query:       MMETSP1325-20131115|1532_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.62
# Mc/sec: 309.21
//
Query:       MMETSP1325-20131115|1533_1  [L=281]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-93  313.0   0.0    3.5e-93  312.8   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  312.8   0.0   2.5e-97   3.5e-93     107     384 ..       2     278 ..       1     280 [. 0.96

  Alignments for each domain:
  == domain 1    score: 312.8 bits;  conditional E-value: 2.5e-97
  PF03028.10 107 lskiveessastpilfilspGvDplkkveklakklgieekkltsvslGqgqgviAekaieeaakeGhWVlLqNiHLaaswlkeLekkleklse...gshadFRlfLtaepapklPiglLqnsikltnEpptGlkanllralssfkqevlemckkeaefkrllflLcffHAvvqERrkfgplGWnksYeFnegDlrisldvldnyleanapekvpwealryllgeimYGGritddfDrrllrtyleelfteellde.elelapkdesfkvPekkeyeeyleyi 384
                 l+ i++ ss  tp++f+lspGvDp+++v +la++ g    ++ + +lGqgq+++A  +++ +++ G+W +L N+HL+ swl+ Lek ++++ e     h++FRl+L++ p+p++Pi +Lq+++k+t+Epp+Gl+an+l+ ++++++e++  c    ++k+llf+L++fHA+++ERrkf  lG n++YeFne+D+ i+ d++  +l+++ p++ p ea+ryl++e+ YGGr+td  Drrl++ y++++++++++   e+ l +  +++ vP+  + e+y   i
  MMETSP1325-20131115|1533_1   2 LKVIYQTSSVYTPLIFVLSPGVDPTAQVMQLAEQIG---VTMENCALGQGQEPVALGMVNRGVETGSWAFLANCHLMISWLPVLEKVIDNYIEaetPPHPNFRLWLSSSPNPHFPIAVLQRGVKMTTEPPSGLRANMLKLYNTVSEEQFGRCGMAFKYKKLLFSLAWFHAILLERRKFKSLGFNIPYEFNESDFAICHDLIIVFLDEY-PDRTPIEAMRYLIAEANYGGRVTDALDRRLVNVYITQFICDDAIGMdEYPLSE-LDAYVVPPDGDLESYKDAI 278
                 567899******************************...6799***********************************************98876679**************************************************************************************************************.********************************************986888888.66667****9999998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.81
# Mc/sec: 831.33
//
Query:       MMETSP1325-20131115|1537_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.61
# Mc/sec: 341.78
//
Query:       MMETSP1325-20131115|1530_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        85  (0.00621709); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.47
# Mc/sec: 173.35
//
Query:       MMETSP1325-20131115|1536_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 1353.24
//
Query:       MMETSP1325-20131115|1538_1  [L=236]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       630  (0.0460796); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.45s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 1229.44
//
Query:       MMETSP1325-20131115|1539_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.7   0.1      0.018   14.7   0.0    1.1  1  PF09038.5 Tumour suppressor p53-binding protein-1 Tudor
       0.11   11.4   0.0       0.12   11.3   0.0    1.1  1  PF06003.7 Survival motor neuron protein (SMN)


Domain annotation for each model (and alignments):
>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   2.7e-06     0.018       3      38 ..       2      37 ..       1      53 [. 0.91

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.7e-06
                -------EEE-ST---BB---EEEE-----EEEE-- CS
   PF09038.5  3 sfvglrvvakwssngyfysgkitkdagegkykllfd 38
                s+vg +v a+w s+g +y   i     +g  kl ++
  MMETSP1325-20131115|1539_1  2 SVVGTKVQARWGSEGKLYGATIQAINSDGTVKLEWE 37
                789********************9999999999876 PP

>> PF06003.7  Survival motor neuron protein (SMN)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.7e-05      0.12      71      96 ..       4      29 ..       2      44 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.7e-05
   PF06003.7 71 vgdscnavwsedgnlysatiasidak 96
                vg   +a w  +g ly ati +i+ +
  MMETSP1325-20131115|1539_1  4 VGTKVQARWGSEGKLYGATIQAINSD 29
                79999******************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.28u 0.47s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|1540_1  [L=334]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-07   29.1   2.8    8.8e-07   28.3   2.0    1.3  1  PF01529.15 DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   2.0   6.4e-11   8.8e-07      72     171 ..     110     202 ..     102     205 .. 0.75

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 6.4e-11
  PF01529.15  72 vlkfDhHCpwvnncIGarNhkyFllfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllfllafhlylilrnmTtieel 171
                 + + Dh+Cpw+n  IG+ N+  F+l++  ++  + +  ++ l  +++ + +t    +        +l  v+ a ++++  +l+ fh+yl +r++ t+ +l
  MMETSP1325-20131115|1540_1 110 IEGLDHFCPWLNVSIGRSNYLPFILLVALGLCQFGLQAVVGLLWALSGAYTTAGLVFI-------VLHEVMVAPIWCMYVMLFGFHVYLGVRGLSTYGYL 202
                 5678****************99987766666665555555555555555555554444.......45567889999999999999999999998888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       503  (0.0367905); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.45s 00:00:00.97 Elapsed: 00:00:00.53
# Mc/sec: 1510.16
//
Query:       MMETSP1325-20131115|1542_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.45s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 653.12
//
Query:       MMETSP1325-20131115|1544_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 686.02
//
Query:       MMETSP1325-20131115|1541_1  [L=677]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00063   19.4   0.0      0.002   17.8   0.0    1.8  1  PF00439.20 Bromodomain
      0.002   17.7  14.5      0.002   17.7  10.1    2.6  2  PF13639.1  Ring finger domain
  ------ inclusion threshold ------
        1.7    8.7  18.9      0.062   13.3   7.7    2.6  3  PF12678.2  RING-H2 zinc finger


Domain annotation for each model (and alignments):
>> PF00439.20  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.4e-07     0.002      36      81 ..     416     461 ..     402     464 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 4.4e-07
  PF00439.20  36 PidLktIqkklasgkyqslaqfekdlelvfsNavkyneegsdvyed 81 
                  + L+ + +kl++ +y+s+++fe d+ ++f+ a+  + ++s   ++
  MMETSP1325-20131115|1541_1 416 RVGLEGVANKLQRDQYDSVHEFERDMLQIFDGARLKHDNKSMESQA 461
                 5679999************************999887777766655 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7  10.1   4.4e-07     0.002       2      43 ..      50      97 ..      49     131 .. 0.88
   2 ?   -1.1   0.0      0.31   1.4e+03      13      31 ..     245     255 ..     239     262 .. 0.60

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 4.4e-07
   PF13639.1  2 eCaiCldelse.....geevvrlpCgH.vfHeeCldewlrssnsCPlC 43
                +C iC++++++     g +v r  Cg   fH++C++ wlr++n C  C
  MMETSP1325-20131115|1541_1 50 VCLICMQSTESggvdgGAAVFRPACGCgSFHQHCVEPWLRQNNVCAHC 97
                7********889999778888888*9637************9966555 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.31
   PF13639.1  13 geevvrlpCgHvfHeeCld 31 
                 g++vv+l+C         +
  MMETSP1325-20131115|1541_1 245 GRDVVCLHC--------AK 255
                 555555555........44 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   7.7   1.4e-05     0.062      16      74 ..      45      97 ..      32     101 .. 0.70
   2 ?   -2.7   0.3       1.4   6.2e+03      27      52 ..     118     144 ..     114     146 .. 0.66
   3 ?   -2.1   0.0      0.89     4e+03      15      30 ..     242     258 ..     230     267 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.4e-05
   PF12678.2 16 disednCaiCrneleelcpeckapgksdecpvawgeCgH.aFHlhCiskWlktrktCPlc 74
                d+ + +C+iC ++ e+      + g      v   +Cg  +FH+hC++ Wl+++++C  c
  MMETSP1325-20131115|1541_1 45 DMDSGVCLICMQSTESGG----VDG---GAAVFRPACGCgSFHQHCVEPWLRQNNVCAHC 97
                555668999999994333....333...3444444454328**************88766 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 1.4
   PF12678.2  27 nel.eelcpeckapgksdecpvawgeC 52 
                 n++   +c  c+ ++++++   + g+C
  MMETSP1325-20131115|1541_1 118 NPYkRAACSACDEEKQRQSLGPICGKC 144
                 666566788888888555555567777 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.89
   PF12678.2  15 wdisedn.CaiCrnele 30 
                 + +  d+ C+ C +++ 
  MMETSP1325-20131115|1541_1 242 FTTGRDVvCLHCAKQMP 258
                 45566756999998884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       697  (0.0509801); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.13u 0.43s 00:00:01.55 Elapsed: 00:00:00.82
# Mc/sec: 1978.46
//
Query:       MMETSP1325-20131115|1545_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-20   71.2   0.0    9.6e-20   70.6   0.0    1.3  1  PF01062.16 Bestrophin, RFP-TM, chloride channel


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0     7e-24   9.6e-20     142     287 ..      17     158 ..       2     167 .. 0.84

  Alignments for each domain:
  == domain 1    score: 70.6 bits;  conditional E-value: 7e-24
  PF01062.16 142 kkrlealveaglmteeeekleksknkpywvpivwaeslqkarkegrlddi.....alkaldeelnelrealggleridwtpiPlaYtqlvhlavylyflllpfglqdeldlvtplltvlqfyffvglekvaeeLenPFGeddddlelnalc 287
                 k  + +l+    ++e+ ++le   n+p +++++++++++   ++ + d+i        a++  +++l+e +g++er  +tp+Pl Y  ++ +++ +++l+lp++l+ e+++ +++++ ++ + ++g+++++  +e+PF      l+++ ++
  MMETSP1325-20131115|1545_1  17 K--VMHLL----EREDKKALERVGNRPVCILNNLGREMKAIPDQTKGDQIlfssrERLAVLGMVEKLSELIGACERLVQTPVPLNYARHTSRFLTIWCLMLPIALVGEIGYAVVPISGMICWGLFGIQEIGLMIEEPF---RRTLPIEVIT 158
                 3..55666....8888889******************99888887777774444466778899***************************************************************************...5555655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1552  (0.113517); expected 273.4 (0.02)
Passed bias filter:                      869  (0.0635606); expected 273.4 (0.02)
Passed Vit filter:                        89  (0.00650965); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.40s 00:00:01.08 Elapsed: 00:00:00.60
# Mc/sec: 986.50
//
Query:       MMETSP1325-20131115|1547_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 410.15
//
Query:       MMETSP1325-20131115|1546_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   14.9   0.1      0.042   13.9   0.0    1.5  1  PF10919.3 Protein of unknown function (DUF2699)


Domain annotation for each model (and alignments):
>> PF10919.3  Protein of unknown function (DUF2699)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.1e-06     0.042      13      56 ..     112     157 ..     103     169 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.1e-06
   PF10919.3  13 vadlpA.ddaagkeVddegevde.alpgrdiGdvadpqlVrligse 56 
                   +lpA +++a  e++  gev    l +r +Gdv d+++Vr+++ e
  MMETSP1325-20131115|1546_1 112 ANQLPAiHQLALREIEVTGEVPDlELDKRVVGDVLDVERVRVLDKE 157
                 45678879*************999*****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|1549_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-17   61.2   0.0    9.8e-09   34.9   0.0    3.2  3  PF13424.1  Tetratricopeptide repeat
    1.8e-11   43.3   2.5    6.2e-06   25.8   0.0    4.5  4  PF13374.1  Tetratricopeptide repeat
    1.6e-05   24.9   7.3       0.33   11.5   0.0    5.1  5  PF13428.1  Tetratricopeptide repeat
    0.00042   19.9   1.3         28    4.8   0.0    4.7  4  PF07719.12 Tetratricopeptide repeat
    0.00045   20.3   1.1        2.8    8.4   0.0    4.5  4  PF13174.1  Tetratricopeptide repeat
     0.0033   17.5  12.8       0.34   11.3   0.0    5.1  5  PF07721.9  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.2   3.9e-11   8.9e-08       6      70 ..     166     231 ..     160     231 .. 0.94
   2 !   34.9   0.0   4.3e-12   9.8e-09       2      74 ..     204     277 ..     203     280 .. 0.92
   3 ?   -0.6   0.3      0.51   1.2e+03      22      29 ..     325     332 ..     313     363 .. 0.68

  Alignments for each domain:
  == domain 1    score: 31.8 bits;  conditional E-value: 3.9e-11
   PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleyle 70 
                 ++ +n a++l+++gd+  A++l e+ +   +++ gd+h  t+ a  n+a++ + +gd + A+++++
  MMETSP1325-20131115|1549_1 166 QLAFNVAGLLEAQGDLSAARALWEQIVPArAEKDGDTHELTLAAKGNYAIVMHSQGDWEGARDMYR 231
                 6789*************************9*********************************996 PP

  == domain 2    score: 34.9 bits;  conditional E-value: 4.3e-12
   PF13424.1   2 pdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                 + + ++  n+a v + +gd++ A+++y+ ++e   ++ g++hp t+r+  nla +++  gd + A++ ++ ++e
  MMETSP1325-20131115|1549_1 204 ELTLAAKGNYAIVMHSQGDWEGARDMYRLVVEGkTAVRGPHHPSTLRSRSNLASVKYCSGDISGAVDEFRAVVE 277
                 566777889************************999*****************************999988776 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.51
   PF13424.1  22 deAlelye 29 
                 deA++lye
  MMETSP1325-20131115|1549_1 325 DEARALYE 332
                 33333333 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00019      0.43       7      32 ..     170     195 ..     168     203 .. 0.91
   2 !   25.8   0.0   2.7e-09   6.2e-06       1      41 [.     206     246 ..     206     247 .. 0.98
   3 ?    1.3   0.0      0.13     3e+02       1      29 [.     248     276 ..     248     278 .. 0.80
   4 ?    1.4   0.5      0.13   2.9e+02      24      35 ..     324     334 ..     314     338 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00019
   PF13374.1   7 nLAlalrargryeeAlaleeealair 32 
                 n+A +l a+g++ +A+al e+++  r
  MMETSP1325-20131115|1549_1 170 NVAGLLEAQGDLSAARALWEQIVPAR 195
                 99*******************98666 PP

  == domain 2    score: 25.8 bits;  conditional E-value: 2.7e-09
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 t+aa  n A++ + +g++e A+++++ +++ ++++ G++HP
  MMETSP1325-20131115|1549_1 206 TLAAKGNYAIVMHSQGDWEGARDMYRLVVEGKTAVRGPHHP 246
                 8999************************************9 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.13
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeeal 29 
                 t+++++nLA + +  g+   A++ +++++
  MMETSP1325-20131115|1549_1 248 TLRSRSNLASVKYCSGDISGAVDEFRAVV 276
                 899******99888888877777777766 PP

  == domain 4    score: 1.4 bits;  conditional E-value: 0.13
   PF13374.1  24 leeealairrrl 35 
                 l+ ea+a++++l
  MMETSP1325-20131115|1549_1 324 LD-EARALYEAL 334
                 33.666666655 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.7   1.3e+04      22      35 ..       2      15 ..       1      21 [. 0.67
   2 !    6.1   0.8     0.008        18       6      33 ..     170     198 ..     165     209 .. 0.76
   3 !   11.5   0.0   0.00015      0.33       2      30 ..     208     241 ..     207     258 .. 0.75
   4 ?    2.3   0.0      0.14   3.2e+02       5      29 ..     253     277 ..     249     285 .. 0.86
   5 ?    4.0   0.7      0.04        92      17      39 ..     324     346 ..     314     355 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 5.7
   PF13428.1 22 allrralalaPdda 35
                a+lrr+l     d+
  MMETSP1325-20131115|1549_1  2 AALRRYLDNRGLDP 15
                67888887655554 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.008
   PF13428.1   6 alarallalGdpdeAiallrral.alaPd 33 
                   a +l+a+Gd+ +A+al ++++ a+a +
  MMETSP1325-20131115|1549_1 170 NVAGLLEAQGDLSAARALWEQIVpARAEK 198
                 56889****************97334444 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 0.00015
   PF13428.1   2 eallalarallalGdpdeAiallrrala.....l 30 
                 +a   +a+++  +Gd+++A++++r +++     +
  MMETSP1325-20131115|1549_1 208 AAKGNYAIVMHSQGDWEGARDMYRLVVEgktavR 241
                 566789******************8887555553 PP

  == domain 4    score: 2.3 bits;  conditional E-value: 0.14
   PF13428.1   5 lalarallalGdpdeAiallrrala 29 
                   la +   +Gd  +A++ +r++++
  MMETSP1325-20131115|1549_1 253 SNLASVKYCSGDISGAVDEFRAVVE 277
                 5688899999************986 PP

  == domain 5    score: 4.0 bits;  conditional E-value: 0.04
   PF13428.1  17 pdeAiallrralalaPddaeall 39 
                 +deA+al++++ +l+ +++e + 
  MMETSP1325-20131115|1549_1 324 LDEARALYEALTELDGQEEETQE 346
                 799********999998877664 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.012        28       5      26 ..     169     190 ..     166     192 .. 0.87
   2 ?    4.8   0.0     0.012        28       6      26 ..     212     232 ..     208     235 .. 0.84
   3 ?    1.1   0.0      0.19   4.4e+02       6      28 ..     254     276 ..     251     277 .. 0.88
   4 ?    3.6   0.2      0.03        68      17      31 ..     324     338 ..     323     341 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.012
                 HHHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12   5 ynlGlayyklgdyeeAleafek 26 
                 +n + +++++gd+  A++++e+
  MMETSP1325-20131115|1549_1 169 FNVAGLLEAQGDLSAARALWEQ 190
                 7778899*************98 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.012
                 HHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12   6 nlGlayyklgdyeeAleafek 26 
                 n + +   +gd+e A++ ++ 
  MMETSP1325-20131115|1549_1 212 NYAIVMHSQGDWEGARDMYRL 232
                 67889999********99986 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.19
                 HHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAl 28 
                 nl+ + y +gd   A++ f+ ++
  MMETSP1325-20131115|1549_1 254 NLASVKYCSGDISGAVDEFRAVV 276
                 7899999************9876 PP

  == domain 4    score: 3.6 bits;  conditional E-value: 0.03
                 HHHHHHHHHHHHHH- CS
  PF07719.12  17 yeeAleafekAleld 31 
                 ++eA++++e   eld
  MMETSP1325-20131115|1549_1 324 LDEARALYEALTELD 338
                 59**********998 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.022        49       4      27 ..     169     192 ..     166     192 .. 0.83
   2 !    8.4   0.0    0.0012       2.8       6      27 ..     213     234 ..     212     235 .. 0.88
   3 ?   -0.3   0.0      0.73   1.7e+03      14      28 ..     263     277 ..     251     280 .. 0.79
   4 ?    1.3   0.2      0.23   5.3e+02      17      28 ..     325     336 ..     312     350 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyklgdtdeAlealerli 27 
                 ++ a +++++gd ++A++++e+++
  MMETSP1325-20131115|1549_1 169 FNVAGLLEAQGDLSAARALWEQIV 192
                 56666778899**********986 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerli 27 
                 +a ++  +gd++ A+++++ ++
  MMETSP1325-20131115|1549_1 213 YAIVMHSQGDWEGARDMYRLVV 234
                 788899999*********9987 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 0.73
                 HHHHHHHHHHHHHHH CS
   PF13174.1  14 gdtdeAlealerlik 28 
                 gd + A++ ++ +++
  MMETSP1325-20131115|1549_1 263 GDISGAVDEFRAVVE 277
                 5999*******9997 PP

  == domain 4    score: 1.3 bits;  conditional E-value: 0.23
                 HHHHHHHHHHHH CS
   PF13174.1  17 deAlealerlik 28 
                 deA++++e l +
  MMETSP1325-20131115|1549_1 325 DEARALYEALTE 336
                 677777777754 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   1.0     0.001       2.3      10      26 .]     174     190 ..     166     190 .. 0.89
   2 !   11.3   0.0   0.00015      0.34       2      25 ..     208     231 ..     207     231 .. 0.89
   3 ?   -0.1   0.0      0.71   1.6e+03       2      25 ..     250     273 ..     249     274 .. 0.83
   4 ?   -3.3   0.1         6   1.4e+04       3      10 ..     300     307 ..     299     307 .. 0.78
   5 ?   -0.3   1.2      0.86   1.9e+03      17      25 ..     324     332 ..     320     333 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.001
                 HHHH-------HHHHHT CS
   PF07721.9  10 allalGdldeAraller 26 
                 +l a+Gdl +Aral+e+
  MMETSP1325-20131115|1549_1 174 LLEAQGDLSAARALWEQ 190
                 6889***********98 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00015
                 HHH---HHHHHH-------HHHHH CS
   PF07721.9   2 rallaLArallalGdldeAralle 25 
                 +a  ++A +++ +Gd++ Ar++ +
  MMETSP1325-20131115|1549_1 208 AAKGNYAIVMHSQGDWEGARDMYR 231
                 577899**************9976 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.71
                 HHH---HHHHHH-------HHHHH CS
   PF07721.9   2 rallaLArallalGdldeAralle 25 
                 r +++LA + +  Gd   A + ++
  MMETSP1325-20131115|1549_1 250 RSRSNLASVKYCSGDISGAVDEFR 273
                 7899***99999999988887766 PP

  == domain 4    score: -3.3 bits;  conditional E-value: 6
                 HH---HHH CS
   PF07721.9   3 allaLAra 10 
                 a+l+LA a
  MMETSP1325-20131115|1549_1 300 ARLDLANA 307
                 89999976 PP

  == domain 5    score: -0.3 bits;  conditional E-value: 0.86
                 ----HHHHH CS
   PF07721.9  17 ldeAralle 25 
                 ldeAral e
  MMETSP1325-20131115|1549_1 324 LDEARALYE 332
                 589999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       417  (0.0305003); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.35s 00:00:01.03 Elapsed: 00:00:00.77
# Mc/sec: 1139.05
//
Query:       MMETSP1325-20131115|1535_1  [L=457]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-47  161.9  24.3      1e-44  153.0  13.5    2.5  2  PF01148.15 Cytidylyltransferase family


Domain annotation for each model (and alignments):
>> PF01148.15  Cytidylyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.0  13.5   7.4e-49     1e-44       2     237 ..      47     357 ..      46     361 .. 0.88
   2 !   10.9   0.1   1.7e-05      0.24     237     259 .]     403     425 ..     402     425 .. 0.89

  Alignments for each domain:
  == domain 1    score: 153.0 bits;  conditional E-value: 7.4e-49
  PF01148.15   2 kRkilhivl.ilivlillllgklillllvaivvilalkelirllrak.frskkllltrllsliflllalllvylesllallklvlllvlvllllvlk.............slklhrviltllyllyvvlfl............................slllianileglivalllilvvwanDifAylvGkafGkt....llpkispkKTveGflggfvaavlvgllfslvlskrl...............................lsllhllllsllaslvavfgdlfesglKRafgiKDsGkliPGhGg 237
                 +R++++ ++ ++++ +++ +g+l +++ ++++ + ++kel+ + + + + +++l+l r l+++++++a+  +y  ++l+     l l+++l  l                  ++h+ i+++ y + +v+ +                            + + i n ++gl+++l+++l+v++nD+fAy+ G+++Gk+    ++  +sp+KT+eGf+gg +++v++g+ +  +l ++                                  + h+l+l+l+aslva+fg++f+s++KRa+g KD+ ++iPGhGg
  MMETSP1325-20131115|1535_1  47 VRVVTGAMMaGALYAVVFHVGHLGVAFTLFAITAGIFKELVDVGYSEaNPERELPLYRSLQWVWFMVAMSAAYSLEALNA---PLDLTKFLARLPYLdgtalayvplvldARQYHDYITFMGYSVAFVVTVltlkeghyktqirilsftvlalslfvvqMKMAIFNVFQGLFWFLFPLLLVAVNDTFAYFSGFTMGKKvfksVFLTLSPNKTWEGFIGGGLFTVVAGWYLPTLLATPWlacsysdiadngadacqipshfvphaetgisAVQYHGLVLALFASLVAPFGGFFASAIKRAYGLKDFATMIPGHGG 357
                 6777766551566666677888********************987651678999999***************99444443...333333333332224557889999999999********999999999999********************9999999999**********************************9766678899**********************9999998779******************************9*******************************************9 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 1.7e-05
  PF01148.15 237 gilDrldslllaapflyillklf 259
                 g +Drld+++l+a+f+++ l +f
  MMETSP1325-20131115|1535_1 403 GXMDRLDCQFLMAFFTWVHLTTF 425
                 789**************887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.34s 00:00:01.12 Elapsed: 00:00:00.56
# Mc/sec: 1921.29
//
Query:       MMETSP1325-20131115|1550_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       659  (0.0482007); expected 273.4 (0.02)
Passed bias filter:                      502  (0.0367174); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.57
# Mc/sec: 636.27
//
Query:       MMETSP1325-20131115|1552_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          2    6.3   9.5       0.12   10.4   2.8    1.7  2  PF11336.3 Protein of unknown function (DUF3138)
        6.5    6.6   6.8         16    5.3   4.7    1.6  1  PF14282.1 FlxA-like protein


Domain annotation for each model (and alignments):
>> PF11336.3  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.4     0.088     6e+02      54      78 ..      15      39 ..       7      45 .. 0.56
   2 ?   10.4   2.8   1.8e-05      0.12      13      74 ..      45     107 ..      37     129 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.088
   PF11336.3 54 aagggakiqsaaaaaaaapaadaaa 78
                + +gga+ +++++a+ +a a+ ++a
  MMETSP1325-20131115|1552_1 15 SVSGGATGEGVTSASVGATASSTSA 39
                4566666666555555444443332 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 1.8e-05
   PF11336.3  13 alpglaaaaskaeqik.alqaqlaalqqqvkelraalaakpaaagggakiqsaaaaaaaapaa 74 
                 a p++a+a+ +a+ ++ al +ql+ lqqqv+++ a+l+ + + a+ + + ++     ++ p +
  MMETSP1325-20131115|1552_1  45 APPSAATASPSASVVAgALGQQLQELQQQVTAVSAQLELAAGGASASFDPDQQYLGDTSPPFS 107
                 557778888888777549*****************9988777776655555555555555555 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   4.7    0.0024        16      16      43 ..      55      82 ..      26      89 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0024
   PF14282.1 16 ssdsqiksLqkqiqsltkqlkelssdee 43
                s +    +L +q+q+l++q++ +s + e
  MMETSP1325-20131115|1552_1 55 SASVVAGALGQQLQELQQQVTAVSAQLE 82
                2233445688888888888888887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.54
# Mc/sec: 829.85
//
Query:       MMETSP1325-20131115|1554_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 409.38
//
Query:       MMETSP1325-20131115|1557_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-26   90.3   0.0    6.1e-18   63.9   0.0    2.0  2  PF13475.1 Domain of unknown function (DUF4116)
    0.00018   21.0   0.1       0.98    9.0   0.0    3.0  3  PF05480.6 Staphylococcus haemolytic protein


Domain annotation for each model (and alignments):
>> PF13475.1  Domain of unknown function (DUF4116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.0     9e-22   6.1e-18       2      48 ..       1      47 [.       1      48 [. 0.99
   2 !   29.6   0.0   4.6e-11   3.2e-07      16      38 ..      40      62 .]      40      62 .] 0.97

  Alignments for each domain:
  == domain 1    score: 63.9 bits;  conditional E-value: 9e-22
   PF13475.1  2 rEivleavkkngsalkylseeLknDkeivlkAvkqngsalsyaseeL 48
                rEiv +avk++gsal+ +s eL++D+eiv +Avkq+g +l+yas+eL
  MMETSP1325-20131115|1557_1  1 REIVQAAVKQDGSALQCASAELRSDREIVQAAVKQDGRPLEYASDEL 47
                9*********************************************8 PP

  == domain 2    score: 29.6 bits;  conditional E-value: 4.6e-11
   PF13475.1 16 lkylseeLknDkeivlkAvkqng 38
                l+y+s+eL +D+eivl+Avkq+g
  MMETSP1325-20131115|1557_1 40 LEYASDELWSDREIVLAAVKQDG 62
                79*******************98 PP

>> PF05480.6  Staphylococcus haemolytic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00014      0.98      10      23 ..       2      15 ..       1      17 [. 0.89
   2 !    6.9   0.0   0.00066       4.5      10      20 ..      27      37 ..      26      40 .. 0.87
   3 ?    1.8   0.0     0.025   1.7e+02      10      20 ..      52      62 .]      51      62 .] 0.89

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00014
   PF05480.6 10 naVqAGlakDwakL 23
                ++VqA+ ++D++ L
  MMETSP1325-20131115|1557_1  2 EIVQAAVKQDGSAL 15
                79*********976 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.00066
   PF05480.6 10 naVqAGlakDw 20
                ++VqA+ ++D+
  MMETSP1325-20131115|1557_1 27 EIVQAAVKQDG 37
                79********9 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.025
   PF05480.6 10 naVqAGlakDw 20
                ++V A+ ++D+
  MMETSP1325-20131115|1557_1 52 EIVLAAVKQDG 62
                7999******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 260.66
//
Query:       MMETSP1325-20131115|1558_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.036   13.5   0.0       0.04   13.3   0.0    1.0  1  PF02965.12 Vitamin B12 dependent methionine synthase, activation domain


Domain annotation for each model (and alignments):
>> PF02965.12  Vitamin B12 dependent methionine synthase, activation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.9e-06      0.04      33      82 ..       5      54 ..       3      63 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.9e-06
                HHHHHHHHHHHHHHHHHHHHHHHTS---TT----HHHHHTT--------- CS
  PF02965.12 33 lvdalgsalaEalaeelhkrlrkewgysekenleitdllkerYqGirysp 82
                +vda+g  l  a ae+l  +lr+ w ++++  l    l ++  +G+r+ p
  MMETSP1325-20131115|1558_1  5 MVDACGRPLPTACAEQLAFALRRSWHAVRSGSLRFAVLRRHVPRGMRMMP 54
                8***********************************99999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|1551_1  [L=603]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.4e-162  527.1  41.2    7.7e-22   76.9   0.1    8.7 10  PF13424.1  Tetratricopeptide repeat
   1.2e-129  418.8  58.3    9.7e-15   53.7   0.4   13.3 13  PF13374.1  Tetratricopeptide repeat
    5.2e-50  163.2  21.8    4.5e-05   22.8   0.0   12.7 13  PF13176.1  Tetratricopeptide repeat
    2.2e-41  139.2  19.4    5.2e-07   29.1   0.1    7.8 10  PF13414.1  TPR repeat
    1.2e-38  129.0  21.7      0.003   16.9   0.1   12.0 12  PF00515.23 Tetratricopeptide repeat
    1.1e-31  108.7  48.4    3.1e-08   33.9   1.2    8.2  9  PF13432.1  Tetratricopeptide repeat
    2.2e-25   86.3  37.8      0.058   13.2   0.0   11.9 12  PF07719.12 Tetratricopeptide repeat
    1.2e-24   84.4  58.9     0.0052   17.1   0.0   13.3 13  PF13428.1  Tetratricopeptide repeat
    7.1e-22   75.6  13.6      0.036   14.1   0.1   11.8 12  PF13431.1  Tetratricopeptide repeat
    1.6e-17   61.7  10.2       0.43   10.3   0.0   10.5 10  PF13181.1  Tetratricopeptide repeat
    1.1e-13   50.0  22.3        1.8    9.1   0.0   11.6 11  PF07721.9  Tetratricopeptide repeat
    4.4e-12   45.8   0.0     0.0017   18.3   0.0    6.1  8  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      8e-12   44.5   0.4       0.34   10.6   0.0    7.5  8  PF07720.7  Tetratricopeptide repeat
    2.5e-08   33.8  15.9       0.23   11.3   0.4    7.1  7  PF12688.2  Tetratrico peptide repeat
    0.00039   19.4   0.0         21    4.3   0.0    5.5  6  PF10516.4  SHNi-TPR
     0.0051   15.7   0.0         16    4.2   0.0    4.4  5  PF04910.9  Transcriptional repressor TCF25
  ------ inclusion threshold ------
      0.036   12.9   4.8        1.6    7.5   0.1    5.2  7  PF13429.1  Tetratricopeptide repeat
      0.073   13.4  14.6         64    4.2   0.0    8.4  8  PF13174.1  Tetratricopeptide repeat
       0.16   12.2  13.0         32    4.8   0.0    7.1  8  PF14357.1  Domain of unknown function (DUF4404)


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.2   3.3e-11   2.4e-08      15      77 ..      77     144 ..      76     145 .. 0.81
   2 !   69.4   0.0   2.3e-22   1.6e-19       1      78 []     109     187 ..     109     187 .. 0.98
   3 !   76.9   0.1   1.1e-24   7.7e-22       1      78 []     151     229 ..     151     229 .. 0.98
   4 !   71.1   0.0   6.7e-23   4.8e-20       1      78 []     235     313 ..     235     313 .. 0.99
   5 !   74.8   0.2   4.6e-24   3.3e-21       1      78 []     277     355 ..     277     355 .. 0.98
   6 !   59.7   0.0   2.3e-19   1.7e-16       1      78 []     361     439 ..     361     439 .. 0.93
   7 !   66.5   0.7   1.8e-21   1.3e-18       9      78 .]     411     481 ..     411     481 .. 0.98
   8 !   69.5   1.3   2.2e-22   1.6e-19       1      77 [.     445     522 ..     445     523 .. 0.97
   9 !   63.5   0.0   1.6e-20   1.2e-17       1      78 []     487     565 ..     487     565 .. 0.97
  10 !   36.6   0.1     4e-12   2.9e-09       1      66 [.     529     595 ..     529     597 .. 0.95

  Alignments for each domain:
  == domain 1    score: 33.6 bits;  conditional E-value: 3.3e-11
   PF13424.1  15 lrrlgdydeAlel....yekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77 
                 l+++gd+ eA+      ++ ale   ++lg++hpdta++ n la l++a+gdyd A+++ ++ ++i e
  MMETSP1325-20131115|1551_1  77 LQAKGDHNEAERErerqLRLALENnEARLGPHHPDTANSVNSLASLLYAKGDYDGAEPLCRRMVAINE 144
                 67888888888761111556666666669******************************999998876 PP

  == domain 2    score: 69.4 bits;  conditional E-value: 2.3e-22
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                 hpd+a++ n la +l+++gdyd A+ l+++ +++   +lg++hp ta++  nla+l++ +gdyd+A++++++Alei+e+
  MMETSP1325-20131115|1551_1 109 HPDTANSVNSLASLLYAKGDYDGAEPLCRRMVAInETTLGPRHPFTATSVSNLARLLEDKGDYDAAEPLHRRALEIREA 187
                 9*********************************99999*************************************986 PP

  == domain 3    score: 76.9 bits;  conditional E-value: 1.1e-24
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                 hp +at+ +nla +l+ +gdyd A+ l ++ale+  ++lg+dhp+ta +l nl+ l++++g++d+A+++ ++Al+i+ek
  MMETSP1325-20131115|1551_1 151 HPFTATSVSNLARLLEDKGDYDAAEPLHRRALEIrEAVLGPDHPETALSLSNLGLLLMHKGELDAAEPLSRRALAIREK 229
                 8999******************************99999**************************************97 PP

  == domain 4    score: 71.1 bits;  conditional E-value: 6.7e-23
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                 hpd+at+ +nla++l  +gd   A+ l+++al +  ++lg +hp ta+++nnla l++ +gdyd+A+ ++++Alei+e+
  MMETSP1325-20131115|1551_1 235 HPDTATSVSNLAGLLGTMGDIAAAEPLFRRALSVdEAVLGKNHPSTATSMNNLASLLQSKGDYDAAELLHRRALEIREA 313
                 9***************************************************************************986 PP

  == domain 5    score: 74.8 bits;  conditional E-value: 4.6e-24
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                 hp++at++nnla +l+ +gdyd A+ l ++ale+  ++lg+dh dta++ nnla++++ +gdy++A++++++ l+i e+
  MMETSP1325-20131115|1551_1 277 HPSTATSMNNLASLLQSKGDYDAAELLHRRALEIrEAVLGPDHRDTATSVNNLATTLQDKGDYAAAVPLFRRGLAINEA 355
                 89********************************99999*************************************985 PP

  == domain 6    score: 59.7 bits;  conditional E-value: 2.3e-19
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                 hp++ +  +nla  l+ +g+yd+A+ ly++al+    +lg+dhp t  + n la l++a+gd+ +A++++++Al+i+e+
  MMETSP1325-20131115|1551_1 361 HPSTGAMVHNLARGLKDMGEYDQAEPLYRRALATcEVSLGPDHPTTSATVNSLASLLEAKGDNTAAEPLFRRALAIDEA 439
                 677766678*************************66689*************************************985 PP

  == domain 7    score: 66.5 bits;  conditional E-value: 1.8e-21
   PF13424.1   9 nnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                 n la +l+++gd   A+ l+++al++  + l+ddhp+ta++l nla l++a+gd+d+A++++++Al+i+ek
  MMETSP1325-20131115|1551_1 411 NSLASLLEAKGDNTAAEPLFRRALAIdEAALPDDHPQTATSLSNLAGLLQAKGDNDAAEPLYRRALAIREK 481
                 679***********************999****************************************97 PP

  == domain 8    score: 69.5 bits;  conditional E-value: 2.2e-22
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77 
                 hp++at+l+nla++l+++gd d A+ ly++al++  + lg++hp ta++lnnla l+  + +yd+ +++l++Al+i e
  MMETSP1325-20131115|1551_1 445 HPQTATSLSNLAGLLQAKGDNDAAEPLYRRALAIrEKALGPEHPATASSLNNLAALLCDKSEYDAGEPLLRRALAIKE 522
                 89********************************88889************************************987 PP

  == domain 9    score: 63.5 bits;  conditional E-value: 1.6e-20
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                 hp +a++lnnla +l+ + +yd  + l+++al++  ++ g++hpdta +  nla l+ a+gd+d A+++l +Al+i e+
  MMETSP1325-20131115|1551_1 487 HPATASSLNNLAALLCDKSEYDAGEPLLRRALAIkEAVRGPHHPDTALSVSNLASLLCAKGDFDGAVPLLGRALAINEA 565
                 899*******************************88889*************************************985 PP

  == domain 10    score: 36.6 bits;  conditional E-value: 4e-12
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAl 66 
                 hpd+a + +nla +l+++gd+d A  l+ +al++  +++g +h  t +a +nla l++ +gd   A+
  MMETSP1325-20131115|1551_1 529 HPDTALSVSNLASLLCAKGDFDGAVPLLGRALAInEAVHGTHHEHTKTAARNLAGLLEDMGDGGNAE 595
                 89999999**************************999************************977765 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   1.9         1   7.4e+02      34      42 .]     101     111 ..      76     111 .. 0.58
   2 !   32.4   0.0   6.9e-11   4.9e-08       1      41 [.     112     152 ..     112     153 .. 0.98
   3 !   50.3   0.2   1.6e-16   1.2e-13       1      42 []     154     195 ..     154     195 .. 0.98
   4 !   48.2   0.2   7.6e-16   5.5e-13       1      42 []     196     237 ..     196     237 .. 0.99
   5 !   34.9   0.0   1.2e-11   8.3e-09       1      41 [.     238     278 ..     238     279 .. 0.98
   6 !   53.7   0.4   1.4e-17   9.7e-15       1      42 []     280     321 ..     280     321 .. 0.98
   7 !   39.1   0.1   5.3e-13   3.8e-10       1      41 [.     322     362 ..     322     363 .. 0.98
   8 !   36.9   0.0   2.8e-12     2e-09       6      41 ..     369     404 ..     366     405 .. 0.98
   9 !   30.2   0.1   3.5e-10   2.5e-07       1      42 []     406     447 ..     406     447 .. 0.96
  10 !   49.5   0.4   2.9e-16   2.1e-13       1      41 [.     448     488 ..     448     489 .. 0.98
  11 !   43.2   0.1   2.9e-14   2.1e-11       1      42 []     490     531 ..     490     531 .. 0.99
  12 !   29.6   0.1   5.2e-10   3.8e-07       1      41 [.     532     572 ..     532     573 .. 0.95
  13 ?    4.5   0.5     0.043        31       4      24 ..     577     597 ..     576     598 .. 0.91

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 1
   PF13374.1  34 rl..lGddHPd 42 
                     lG++HPd
  MMETSP1325-20131115|1551_1 101 NEarLGPHHPD 111
                 33459****98 PP

  == domain 2    score: 32.4 bits;  conditional E-value: 6.9e-11
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 ta + n LA +l+a g+y+ A++l ++ +ai +  lG+ HP
  MMETSP1325-20131115|1551_1 112 TANSVNSLASLLYAKGDYDGAEPLCRRMVAINETTLGPRHP 152
                 89999***********************************9 PP

  == domain 3    score: 50.3 bits;  conditional E-value: 1.6e-16
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                 ta++ +nLA++l + g+y++A++l+++al+ir+++lG+dHP+
  MMETSP1325-20131115|1551_1 154 TATSVSNLARLLEDKGDYDAAEPLHRRALEIREAVLGPDHPE 195
                 8999*************************************6 PP

  == domain 4    score: 48.2 bits;  conditional E-value: 7.6e-16
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                 ta +l+nL+l+l+  g++++A++l ++alair++ lG++HPd
  MMETSP1325-20131115|1551_1 196 TALSLSNLGLLLMHKGELDAAEPLSRRALAIREKALGPNHPD 237
                 89***************************************8 PP

  == domain 5    score: 34.9 bits;  conditional E-value: 1.2e-11
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 ta++ +nLA +l ++g+ ++A++l+++al++ +++lG +HP
  MMETSP1325-20131115|1551_1 238 TATSVSNLAGLLGTMGDIAAAEPLFRRALSVDEAVLGKNHP 278
                 8999************************************9 PP

  == domain 6    score: 53.7 bits;  conditional E-value: 1.4e-17
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                 ta+++nnLA +l+  g+y++A+ l+++al+ir+++lG+dH d
  MMETSP1325-20131115|1551_1 280 TATSMNNLASLLQSKGDYDAAELLHRRALEIREAVLGPDHRD 321
                 8***************************************87 PP

  == domain 7    score: 39.1 bits;  conditional E-value: 5.3e-13
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 ta++ nnLA +l++ g+y++A++l+++ lai ++ lG++HP
  MMETSP1325-20131115|1551_1 322 TATSVNNLATTLQDKGDYAAAVPLFRRGLAINEAALGANHP 362
                 89**************************************9 PP

  == domain 8    score: 36.9 bits;  conditional E-value: 2.8e-12
   PF13374.1   6 nnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 +nLA+ l ++g+y++A++l+++ala+++  lG+dHP
  MMETSP1325-20131115|1551_1 369 HNLARGLKDMGEYDQAEPLYRRALATCEVSLGPDHP 404
                 7**********************************9 PP

  == domain 9    score: 30.2 bits;  conditional E-value: 3.5e-10
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                 t+a+ n LA +l a g+  +A++l+++alai ++ l+ddHP+
  MMETSP1325-20131115|1551_1 406 TSATVNSLASLLEAKGDNTAAEPLFRRALAIDEAALPDDHPQ 447
                 78999************************************5 PP

  == domain 10    score: 49.5 bits;  conditional E-value: 2.9e-16
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 ta++l+nLA +l+a g+ ++A++l+++alair++ lG++HP
  MMETSP1325-20131115|1551_1 448 TATSLSNLAGLLQAKGDNDAAEPLYRRALAIREKALGPEHP 488
                 8***************************************9 PP

  == domain 11    score: 43.2 bits;  conditional E-value: 2.9e-14
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                 ta++lnnLA +l++  +y++ ++l+++alai++++ G++HPd
  MMETSP1325-20131115|1551_1 490 TASSLNNLAALLCDKSEYDAGEPLLRRALAIKEAVRGPHHPD 531
                 8****************************************8 PP

  == domain 12    score: 29.6 bits;  conditional E-value: 5.2e-10
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 ta + +nLA +l+a g+++ A++l+ +alai ++++G +H 
  MMETSP1325-20131115|1551_1 532 TALSVSNLASLLCAKGDFDGAVPLLGRALAINEAVHGTHHE 572
                 788999*********************************95 PP

  == domain 13    score: 4.5 bits;  conditional E-value: 0.043
   PF13374.1   4 alnnLAlalrargryeeAlal 24 
                 a+ nLA +l ++g+ + A+ l
  MMETSP1325-20131115|1551_1 577 AARNLAGLLEDMGDGGNAELL 597
                 788***************976 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.2     0.019        13       9      35 ..      77     103 ..      75     104 .. 0.88
   2 !    9.0   0.0    0.0016       1.2       3      31 ..     117     145 ..     115     150 .. 0.82
   3 !   22.8   0.0   6.3e-08   4.5e-05       3      34 ..     159     190 ..     157     192 .. 0.90
   4 !    7.6   0.0    0.0046       3.3       1      33 [.     199     231 ..     199     234 .. 0.90
   5 !    9.3   0.0    0.0013      0.95       3      32 ..     243     272 ..     241     276 .. 0.84
   6 !   22.1   0.1     1e-07   7.2e-05       2      34 ..     284     316 ..     283     318 .. 0.90
   7 !   14.1   0.0   3.8e-05     0.027       3      29 ..     327     351 ..     325     360 .. 0.87
   8 !   17.8   0.0   2.5e-06    0.0018       3      28 ..     369     394 ..     366     403 .. 0.88
   9 !   11.2   0.0   0.00032      0.23       3      30 ..     411     438 ..     409     444 .. 0.89
  10 !   20.6   0.1   3.1e-07   0.00022       1      34 [.     451     484 ..     451     486 .. 0.90
  11 !    9.6   0.0     0.001      0.75       1      32 [.     493     524 ..     493     527 .. 0.90
  12 !   16.0   0.0   9.3e-06    0.0067       3      29 ..     537     563 ..     535     568 .. 0.89
  13 ?   -2.6   0.0         8   5.8e+03       4      18 ..     580     594 ..     579     597 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.019
   PF13176.1   9 ysrlgdyekAielyeraLaltkdplda 35 
                  ++ gd+ +A++  er+L+l+ + ++a
  MMETSP1325-20131115|1551_1  77 LQAKGDHNEAERERERQLRLALENNEA 103
                 5778****************9998876 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0016
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltkd 31 
                 + La+l  + gdy+ A+ l++r+ a+ ++
  MMETSP1325-20131115|1551_1 117 NSLASLLYAKGDYDGAEPLCRRMVAINET 145
                 679***9999************7776655 PP

  == domain 3    score: 22.8 bits;  conditional E-value: 6.3e-08
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltkdpld 34 
                 +nLarl ++ gdy+ A+ l++raL+++++ l+
  MMETSP1325-20131115|1551_1 159 SNLARLLEDKGDYDAAEPLHRRALEIREAVLG 190
                 7**********************999987665 PP

  == domain 4    score: 7.6 bits;  conditional E-value: 0.0046
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdpl 33 
                 +l+nL+ l +  g+ + A+ l +raLa+++  l
  MMETSP1325-20131115|1551_1 199 SLSNLGLLLMHKGELDAAEPLSRRALAIREKAL 231
                 79**********************999987665 PP

  == domain 5    score: 9.3 bits;  conditional E-value: 0.0013
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltkdp 32 
                 +nLa l   +gd   A+ l++raL ++++ 
  MMETSP1325-20131115|1551_1 243 SNLAGLLGTMGDIAAAEPLFRRALSVDEAV 272
                 79********************77766655 PP

  == domain 6    score: 22.1 bits;  conditional E-value: 1e-07
   PF13176.1   2 llnLarlysrlgdyekAielyeraLaltkdpld 34 
                  +nLa+l ++ gdy+ A+ l++raL+++++ l+
  MMETSP1325-20131115|1551_1 284 MNNLASLLQSKGDYDAAELLHRRALEIREAVLG 316
                 79**********************999987665 PP

  == domain 7    score: 14.1 bits;  conditional E-value: 3.8e-05
   PF13176.1   3 lnLarlysrlgdyekAielyeraLalt 29 
                 +nLa + ++ gdy  A+ l++r  +l+
  MMETSP1325-20131115|1551_1 327 NNLATTLQDKGDYAAAVPLFRR--GLA 351
                 8*********************..765 PP

  == domain 8    score: 17.8 bits;  conditional E-value: 2.5e-06
   PF13176.1   3 lnLarlysrlgdyekAielyeraLal 28 
                 +nLar   ++g+y++A+ ly+raLa 
  MMETSP1325-20131115|1551_1 369 HNLARGLKDMGEYDQAEPLYRRALAT 394
                 79********************8864 PP

  == domain 9    score: 11.2 bits;  conditional E-value: 0.00032
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltk 30 
                 + La+l ++ gd   A+ l++raLa+++
  MMETSP1325-20131115|1551_1 411 NSLASLLEAKGDNTAAEPLFRRALAIDE 438
                 67********************888876 PP

  == domain 10    score: 20.6 bits;  conditional E-value: 3.1e-07
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdpld 34 
                 +l+nLa l ++ gd + A+ ly+raLa+++  l+
  MMETSP1325-20131115|1551_1 451 SLSNLAGLLQAKGDNDAAEPLYRRALAIREKALG 484
                 79************************99987665 PP

  == domain 11    score: 9.6 bits;  conditional E-value: 0.001
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdp 32 
                 +l+nLa l ++  +y+  + l++raLa++++ 
  MMETSP1325-20131115|1551_1 493 SLNNLAALLCDKSEYDAGEPLLRRALAIKEAV 524
                 79**********************99988765 PP

  == domain 12    score: 16.0 bits;  conditional E-value: 9.3e-06
   PF13176.1   3 lnLarlysrlgdyekAielyeraLalt 29 
                 +nLa+l ++ gd++ A+ l+ raLa+ 
  MMETSP1325-20131115|1551_1 537 SNLASLLCAKGDFDGAVPLLGRALAIN 563
                 7*********************88875 PP

  == domain 13    score: -2.6 bits;  conditional E-value: 8
   PF13176.1   4 nLarlysrlgdyekA 18 
                 nLa l +++gd  +A
  MMETSP1325-20131115|1551_1 580 NLAGLLEDMGDGGNA 594
                 99*9***99996555 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.2   0.00019      0.13      15      68 ..      79     143 ..      76     144 .. 0.70
   2 !   26.7   0.0     4e-09   2.9e-06       2      68 ..     112     185 ..     111     186 .. 0.89
   3 !   29.1   0.1   7.2e-10   5.2e-07       7      68 ..     159     227 ..     152     228 .. 0.83
   4 !   26.1   0.0   5.9e-09   4.3e-06       1      68 [.     195     269 ..     195     270 .. 0.89
   5 !   25.4   0.1   9.9e-09   7.1e-06       6      68 ..     242     311 ..     237     312 .. 0.87
   6 !   27.5   0.2   2.2e-09   1.6e-06       3      68 ..     281     353 ..     279     354 .. 0.86
   7 !   14.0   0.0   3.7e-05     0.027       2      34 ..     322     354 ..     321     372 .. 0.82
   8 !   26.7   0.0   3.8e-09   2.7e-06       8      68 ..     370     437 ..     366     438 .. 0.85
   9 !   23.6   1.6   3.7e-08   2.6e-05       2      67 ..     448     520 ..     447     522 .. 0.87
  10 !   12.3   0.0   0.00013      0.09       2      52 ..     532     590 ..     531     601 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00019
   PF13414.1  15 kegdydeAieayekAleld............pnnaelyynlAlaylklgkdyeeAledyekAleld 68 
                  +gd+ eA+++ e+ l+l             p++a+  + lA +++ +g dy+ A   +++ ++++
  MMETSP1325-20131115|1551_1  79 AKGDHNEAERERERQLRLAlennearlgphhPDTANSVNSLASLLYAKG-DYDGAEPLCRRMVAIN 143
                 5677777777777777774445566666555777778888888888888.6888888888877765 PP

  == domain 2    score: 26.7 bits;  conditional E-value: 4e-09
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAledyekAleld 68 
                 +A + + l+  l+ +gdyd+A+ ++++ ++++        p +a   +nlA +++ +g dy++A    ++Ale++
  MMETSP1325-20131115|1551_1 112 TANSVNSLASLLYAKGDYDGAEPLCRRMVAINettlgprhPFTATSVSNLARLLEDKG-DYDAAEPLHRRALEIR 185
                 6888999************************97777755555688*************.7************986 PP

  == domain 3    score: 29.1 bits;  conditional E-value: 7.2e-10
   PF13414.1   7 kelGnalfkegdydeAieayekAleld.....pnnae...lyynlAlaylklgkdyeeAledyekAleld 68 
                  +l+  l  +gdyd A+ + ++Ale++     p+++e    ++nl+l+++++g+  ++A    ++Al+++
  MMETSP1325-20131115|1551_1 159 SNLARLLEDKGDYDAAEPLHRRALEIReavlgPDHPEtalSLSNLGLLLMHKGE-LDAAEPLSRRALAIR 227
                 588999999****************966677766655555*************6.789988888999875 PP

  == domain 4    score: 26.1 bits;  conditional E-value: 5.9e-09
   PF13414.1   1 enAealkelGnalfkegdydeAieayekAleld.....pnnae...lyynlAlaylklgkdyeeAledyekAleld 68 
                 e+A++l +lG  l+++g++d A+ + ++Al+++     pn+++     +nlA ++  +g d  +A   +++Al+ d
  MMETSP1325-20131115|1551_1 195 ETALSLSNLGLLLMHKGELDAAEPLSRRALAIRekalgPNHPDtatSVSNLAGLLGTMG-DIAAAEPLFRRALSVD 269
                 6899***************************966666666666665*************.689**********988 PP

  == domain 5    score: 25.4 bits;  conditional E-value: 9.9e-09
   PF13414.1   6 lkelGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAledyekAleld 68 
                   +l+  l ++gd + A+ ++++Al+ d        p++a  ++nlA +++ +g dy++A    ++Ale++
  MMETSP1325-20131115|1551_1 242 VSNLAGLLGTMGDIAAAEPLFRRALSVDeavlgknhPSTATSMNNLASLLQSKG-DYDAAELLHRRALEIR 311
                 5688999999****************988888866677777*************.7***999999***986 PP

  == domain 6    score: 27.5 bits;  conditional E-value: 2.2e-09
   PF13414.1   3 AealkelGnalfkegdydeAieayekAleld.....pnn...aelyynlAlaylklgkdyeeAledyekAleld 68 
                 A + ++l+  l ++gdyd A+ + ++Ale++     p++   a   +nlA +++ +g dy +A+  +++ l+++
  MMETSP1325-20131115|1551_1 281 ATSMNNLASLLQSKGDYDAAELLHRRALEIReavlgPDHrdtATSVNNLATTLQDKG-DYAAAVPLFRRGLAIN 353
                 77889************************966666665533377*************.7*******99999886 PP

  == domain 7    score: 14.0 bits;  conditional E-value: 3.7e-05
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleldp 34 
                 +A + ++l+  l  +gdy+ A+ +++++l++++
  MMETSP1325-20131115|1551_1 322 TATSVNNLATTLQDKGDYAAAVPLFRRGLAINE 354
                 577789************************984 PP

  == domain 8    score: 26.7 bits;  conditional E-value: 3.8e-09
   PF13414.1   8 elGnalfkegdydeAieayekAle.....ldpnnae...lyynlAlaylklgkdyeeAledyekAleld 68 
                 +l+  l  +g+yd+A+ +y++Al+     l p+++      + lA +++ +g++  +A   +++Al++d
  MMETSP1325-20131115|1551_1 370 NLARGLKDMGEYDQAEPLYRRALAtcevsLGPDHPTtsaTVNSLASLLEAKGDN-TAAEPLFRRALAID 437
                 677778889**************83333356999988879999*********76.9***********99 PP

  == domain 9    score: 23.6 bits;  conditional E-value: 3.7e-08
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAledyekAlel 67 
                 +A +l +l+  l  +gd d A+ +y++Al+++        p +a+ ++nlA+++  +  +y++    +++Al++
  MMETSP1325-20131115|1551_1 448 TATSLSNLAGLLQAKGDNDAAEPLYRRALAIRekalgpehPATASSLNNLAALLCDKS-EYDAGEPLLRRALAI 520
                 678899************************966667744466677***********99.6**999999999987 PP

  == domain 10    score: 12.3 bits;  conditional E-value: 0.00013
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleld.......pnnae....lyynlAlaylklgk 52 
                 +A++  +l+  l  +gd+d+A+ ++ +Al+++           e    +  nlA +++ +g+
  MMETSP1325-20131115|1551_1 532 TALSVSNLASLLCAKGDFDGAVPLLGRALAINeavhgthH---EhtktAARNLAGLLEDMGD 590
                 68888899***********************955544332...2444688888888888885 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.6   2.6e+03      10      21 ..      76      87 ..      76      88 .. 0.84
   2 !   10.8   0.0   0.00036      0.26       5      32 ..     117     144 ..     113     145 .. 0.91
   3 !   14.7   0.0   2.2e-05     0.016       6      31 ..     160     185 ..     157     187 .. 0.94
   4 !   11.7   0.0   0.00019      0.13       1      31 [.     197     227 ..     197     229 .. 0.88
   5 !    9.0   0.0    0.0014      0.99       6      31 ..     244     269 ..     242     271 .. 0.92
   6 !   16.9   0.1   4.1e-06     0.003       3      31 ..     283     311 ..     281     313 .. 0.92
   7 !   14.4   0.0   2.6e-05     0.019       5      32 ..     327     354 ..     324     355 .. 0.96
   8 !   14.1   0.1   3.3e-05     0.024       6      29 ..     370     393 ..     369     396 .. 0.88
   9 !    8.6   0.0    0.0018       1.3       5      32 ..     411     438 ..     409     439 .. 0.93
  10 !   14.6   0.1   2.3e-05     0.016       2      32 ..     450     480 ..     449     481 .. 0.92
  11 !    8.2   0.1    0.0023       1.7       1      31 [.     491     521 ..     491     522 .. 0.93
  12 !    9.5   0.0   0.00092      0.66       6      32 ..     538     564 ..     535     565 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 3.6
                HHHHTT-HHHHH CS
  PF00515.23 10 aylklgkydeAl 21
                a++ +g+++eA+
  MMETSP1325-20131115|1551_1 76 ALQAKGDHNEAE 87
                57889******7 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00036
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALelnP 32 
                 + l+ +++ +g+yd A+  +++ + +n+
  MMETSP1325-20131115|1551_1 117 NSLASLLYAKGDYDGAEPLCRRMVAINE 144
                 6899******************999997 PP

  == domain 3    score: 14.7 bits;  conditional E-value: 2.2e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   6 nlGnaylklgkydeAleyyekALeln 31 
                 nl+ ++  +g+yd A+   ++ALe++
  MMETSP1325-20131115|1551_1 160 NLARLLEDKGDYDAAEPLHRRALEIR 185
                 9***********************97 PP

  == domain 4    score: 11.7 bits;  conditional E-value: 0.00019
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALeln 31 
                 a +l nlG++++++g++d A+   ++AL ++
  MMETSP1325-20131115|1551_1 197 ALSLSNLGLLLMHKGELDAAEPLSRRALAIR 227
                 56799****************9999998886 PP

  == domain 5    score: 9.0 bits;  conditional E-value: 0.0014
                 HHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   6 nlGnaylklgkydeAleyyekALeln 31 
                 nl+ ++  +g+   A+  +++AL+++
  MMETSP1325-20131115|1551_1 244 NLAGLLGTMGDIAAAEPLFRRALSVD 269
                 88999999***************998 PP

  == domain 6    score: 16.9 bits;  conditional E-value: 4.1e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekALeln 31 
                 + +nl+ +++++g+yd A+   ++ALe++
  MMETSP1325-20131115|1551_1 283 SMNNLASLLQSKGDYDAAELLHRRALEIR 311
                 569************************97 PP

  == domain 7    score: 14.4 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALelnP 32 
                 +nl+ +++ +g+y  A+  +++ L +n+
  MMETSP1325-20131115|1551_1 327 NNLATTLQDKGDYAAAVPLFRRGLAINE 354
                 8*************************95 PP

  == domain 8    score: 14.1 bits;  conditional E-value: 3.3e-05
                 HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23   6 nlGnaylklgkydeAleyyekALe 29 
                 nl+  +  +g+yd+A+  y++AL 
  MMETSP1325-20131115|1551_1 370 NLARGLKDMGEYDQAEPLYRRALA 393
                 67777899**************96 PP

  == domain 9    score: 8.6 bits;  conditional E-value: 0.0018
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALelnP 32 
                 + l+ ++  +g+   A+  +++AL +++
  MMETSP1325-20131115|1551_1 411 NSLASLLEAKGDNTAAEPLFRRALAIDE 438
                 579999********************95 PP

  == domain 10    score: 14.6 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALelnP 32 
                  +l nl+ +++ +g+ d A+  y++AL +++
  MMETSP1325-20131115|1551_1 450 TSLSNLAGLLQAKGDNDAAEPLYRRALAIRE 480
                 5799***********************9976 PP

  == domain 11    score: 8.2 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALeln 31 
                 a +l+nl++++  + +yd  +   ++AL + 
  MMETSP1325-20131115|1551_1 491 ASSLNNLAALLCDKSEYDAGEPLLRRALAIK 521
                 5689************************986 PP

  == domain 12    score: 9.5 bits;  conditional E-value: 0.00092
                 HHHHHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23   6 nlGnaylklgkydeAleyyekALelnP 32 
                 nl+ ++  +g++d A+    +AL +n+
  MMETSP1325-20131115|1551_1 538 NLASLLCAKGDFDGAVPLLGRALAINE 564
                 9************************95 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.4      0.61   4.4e+02      42      60 ..      16      35 ..      11      41 .. 0.59
   2 !   14.5   0.2   5.3e-05     0.038      18      60 ..      92     142 ..      76     152 .. 0.79
   3 !   33.9   1.2   4.3e-11   3.1e-08       3      64 ..     161     235 ..     159     236 .. 0.92
   4 !   23.7   0.2   6.9e-08     5e-05       3      60 ..     245     310 ..     244     319 .. 0.91
   5 !   24.6   0.3   3.7e-08   2.6e-05       3      65 .]     329     404 ..     327     404 .. 0.93
   6 !   23.0   4.1   1.2e-07   8.3e-05       2      59 ..     412     482 ..     411     488 .. 0.90
   7 !   15.2   3.8   3.2e-05     0.023       3      60 ..     455     520 ..     455     533 .. 0.84
   8 !   13.6   0.4   9.9e-05     0.071       3      59 ..     497     561 ..     495     565 .. 0.81
   9 !    8.0   0.0    0.0057       4.1       3      46 ..     539     590 ..     537     600 .. 0.79

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.61
   PF13432.1 42 lrlgrldeAa.allraalal 60
                l+   +++Aa  ++r+al +
  MMETSP1325-20131115|1551_1 16 LASRLVAAAAaPAFRRALPR 35
                55555666666777776633 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 5.3e-05
   PF13432.1  18 aaleaalala........PeaaeallllaeallrlgrldeAaallraalal 60 
                 ++l+ al+++        P+ a+    la +l+++g++d+A+ l r+++a+
  MMETSP1325-20131115|1551_1  92 RQLRLALENNearlgphhPDTANSVNSLASLLYAKGDYDGAEPLCRRMVAI 142
                 44555555558888888999**************************99854 PP

  == domain 3    score: 33.9 bits;  conditional E-value: 4.3e-11
   PF13432.1   3 lArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraal.....alaPdd 64 
                 lAr+l + Gdyd+A++++++al+          Pe a  l +l+ +l+++g+ld+A+ l r+al     al+P++
  MMETSP1325-20131115|1551_1 161 LARLLEDKGDYDAAEPLHRRALEIReavlgpdhPETALSLSNLGLLLMHKGELDAAEPLSRRALairekALGPNH 235
                 8**********************999****99999**********************999999967776666666 PP

  == domain 4    score: 23.7 bits;  conditional E-value: 6.9e-08
   PF13432.1   3 lArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraalal 60 
                 lA +l   Gd ++A++++++al  +        P  a  + +la +l  +g++d+A+ l r+al++
  MMETSP1325-20131115|1551_1 245 LAGLLGTMGDIAAAEPLFRRALSVDeavlgknhPSTATSMNNLASLLQSKGDYDAAELLHRRALEI 310
                 56677788*******************************************************954 PP

  == domain 5    score: 24.6 bits;  conditional E-value: 3.7e-08
   PF13432.1   3 lArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraal.....alaPddp 65 
                 lA  l + Gdy++A++++++ la +        P       +la+ l ++g++d+A+ l+r+al     +l+Pd+p
  MMETSP1325-20131115|1551_1 329 LATTLQDKGDYAAAVPLFRRGLAINeaalganhPSTGAMVHNLARGLKDMGEYDQAEPLYRRALatcevSLGPDHP 404
                 899999**********************************************************777777777765 PP

  == domain 6    score: 23.0 bits;  conditional E-value: 1.2e-07
   PF13432.1   2 alArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraal.....a 59 
                 +lA +l + Gd  +A++++++ala +        P+ a  l +la +l ++g+ d+A+ l+r+al     a
  MMETSP1325-20131115|1551_1 412 SLASLLEAKGDNTAAEPLFRRALAIDeaalpddhPQTATSLSNLAGLLQAKGDNDAAEPLYRRALairekA 482
                 5899999***********************999999*****************************554444 PP

  == domain 7    score: 15.2 bits;  conditional E-value: 3.2e-05
   PF13432.1   3 lArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraalal 60 
                 lA +l + Gd d+A++++++ala          P  a  l +la +l +++++d+ + llr+ala+
  MMETSP1325-20131115|1551_1 455 LAGLLQAKGDNDAAEPLYRRALAIRekalgpehPATASSLNNLAALLCDKSEYDAGEPLLRRALAI 520
                 57789999**********************77777777777777777788*************943 PP

  == domain 8    score: 13.6 bits;  conditional E-value: 9.9e-05
   PF13432.1   3 lArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraala 59 
                 lA +l +  +yd+ +++l++ala          P+ a    +la +l ++g++d+A+ ll +ala
  MMETSP1325-20131115|1551_1 497 LAALLCDKSEYDAGEPLLRRALAIKeavrgphhPDTALSVSNLASLLCAKGDFDGAVPLLGRALA 561
                 8999**************************77777777777777777777*******55555554 PP

  == domain 9    score: 8.0 bits;  conditional E-value: 0.0057
   PF13432.1   3 lArallraGdydeAlaaleaalala........Peaaeallllaeallrlgr 46 
                 lA +l + Gd+d A+++l +ala +         +   a  +la +l ++g+
  MMETSP1325-20131115|1551_1 539 LASLLCAKGDFDGAVPLLGRALAINeavhgthhEHTKTAARNLAGLLEDMGD 590
                 8999*****************9999776666655577777777777777766 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       5.5     4e+03      10      22 ..      76      88 ..      76      89 .. 0.83
   2 !   10.8   0.0   0.00046      0.33       6      33 ..     118     145 ..     113     146 .. 0.90
   3 !   12.2   0.0   0.00016      0.12       5      30 ..     159     184 ..     155     187 .. 0.92
   4 !    8.9   0.1    0.0019       1.4       2      31 ..     198     227 ..     197     230 .. 0.87
   5 ?    4.4   0.0     0.051        37       7      31 ..     245     269 ..     241     271 .. 0.83
   6 !   11.4   0.1   0.00031      0.22       3      30 ..     283     310 ..     281     313 .. 0.91
   7 !   11.6   0.0   0.00025      0.18       5      32 ..     327     354 ..     323     356 .. 0.92
   8 !   13.2   0.0   8.1e-05     0.058       5      29 ..     369     393 ..     368     396 .. 0.93
   9 !    8.4   0.0    0.0027       1.9       7      32 ..     413     438 ..     409     440 .. 0.91
  10 !   11.4   0.2   0.00031      0.22       3      31 ..     451     479 ..     449     482 .. 0.90
  11 ?    3.3   0.2      0.12        86       3      30 ..     493     520 ..     491     523 .. 0.91
  12 !   10.4   0.0   0.00061      0.44       5      32 ..     537     564 ..     533     565 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 5.5
                HHHHTT-HHHHHH CS
  PF07719.12 10 ayyklgdyeeAle 22
                a+ ++gd++eA++
  MMETSP1325-20131115|1551_1 76 ALQAKGDHNEAER 88
                57899******85 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00046
                 HHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAleldPn 33 
                  l+ ++y++gdy+ A+ ++++ ++++ +
  MMETSP1325-20131115|1551_1 118 SLASLLYAKGDYDGAEPLCRRMVAINET 145
                 5899******************999975 PP

  == domain 3    score: 12.2 bits;  conditional E-value: 0.00016
                 HHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAlel 30 
                  nl+++++ +gdy+ A+ + ++Ale+
  MMETSP1325-20131115|1551_1 159 SNLARLLEDKGDYDAAEPLHRRALEI 184
                 59**********************98 PP

  == domain 4    score: 8.9 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleld 31 
                   l nlGl+++++g+++ A+ + ++Al++ 
  MMETSP1325-20131115|1551_1 198 LSLSNLGLLLMHKGELDAAEPLSRRALAIR 227
                 6799***************99999998875 PP

  == domain 5    score: 4.4 bits;  conditional E-value: 0.051
                 HHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   7 lGlayyklgdyeeAleafekAleld 31 
                 l+ ++  +gd + A+ +f++Al+ d
  MMETSP1325-20131115|1551_1 245 LAGLLGTMGDIAAAEPLFRRALSVD 269
                 56666678**************977 PP

  == domain 6    score: 11.4 bits;  conditional E-value: 0.00031
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAlel 30 
                   +nl+ ++  +gdy+ A+ + ++Ale+
  MMETSP1325-20131115|1551_1 283 SMNNLASLLQSKGDYDAAELLHRRALEI 310
                 579***********************98 PP

  == domain 7    score: 11.6 bits;  conditional E-value: 0.00025
                 HHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAleldP 32 
                 +nl+  +  +gdy+ A+ +f++ l+++ 
  MMETSP1325-20131115|1551_1 327 NNLATTLQDKGDYAAAVPLFRRGLAINE 354
                 799**********************996 PP

  == domain 8    score: 13.2 bits;  conditional E-value: 8.1e-05
                 HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAle 29 
                 +nl++ +  +g+y++A+ ++++Al+
  MMETSP1325-20131115|1551_1 369 HNLARGLKDMGEYDQAEPLYRRALA 393
                 699********************97 PP

  == domain 9    score: 8.4 bits;  conditional E-value: 0.0027
                 HHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12   7 lGlayyklgdyeeAleafekAleldP 32 
                 l+ +++++gd   A+ +f++Al++d 
  MMETSP1325-20131115|1551_1 413 LASLLEAKGDNTAAEPLFRRALAIDE 438
                 8999*******************996 PP

  == domain 10    score: 11.4 bits;  conditional E-value: 0.00031
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleld 31 
                  l nl+ ++ ++gd + A+ ++++Al++ 
  MMETSP1325-20131115|1551_1 451 SLSNLAGLLQAKGDNDAAEPLYRRALAIR 479
                 6899**********************986 PP

  == domain 11    score: 3.3 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAlel 30 
                  l+nl+ ++  + +y+  + ++++Al++
  MMETSP1325-20131115|1551_1 493 SLNNLAALLCDKSEYDAGEPLLRRALAI 520
                 699***********************98 PP

  == domain 12    score: 10.4 bits;  conditional E-value: 0.00061
                 HHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAleldP 32 
                  nl+ ++ ++gd++ A+ ++ +Al+++ 
  MMETSP1325-20131115|1551_1 537 SNLASLLCAKGDFDGAVPLLGRALAINE 564
                 589**********************995 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.4       2.5   1.8e+03       8      30 ..      12      35 ..      11      40 .. 0.71
   2 ?    0.7   0.9       1.5   1.1e+03      11      39 ..      77     105 ..      76     106 .. 0.88
   3 !   11.4   0.0   0.00052      0.38       6      33 ..     118     145 ..     113     151 .. 0.88
   4 !   14.1   0.3   6.9e-05      0.05       6      40 ..     160     199 ..     155     203 .. 0.86
   5 !   10.6   0.2   0.00095      0.69       5      31 ..     201     232 ..     197     242 .. 0.79
   6 !    9.8   0.1    0.0017       1.2       6      31 ..     244     269 ..     239     276 .. 0.89
   7 ?    6.2   0.3     0.024        17       7      30 ..     287     315 ..     281     325 .. 0.80
   8 !    8.3   0.2    0.0051       3.7       7      35 ..     329     357 ..     323     361 .. 0.85
   9 !   17.1   0.0   7.2e-06    0.0052       6      31 ..     370     395 ..     366     406 .. 0.84
  10 !   11.2   0.4   0.00057      0.41       6      32 ..     412     438 ..     407     449 .. 0.84
  11 !   11.5   0.7   0.00047      0.34       4      30 ..     452     483 ..     448     494 .. 0.79
  12 ?    6.2   0.1     0.024        18       6      36 ..     496     531 ..     490     536 .. 0.80
  13 !   12.1   0.0   0.00031      0.23       6      32 ..     538     564 ..     533     582 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 2.5
   PF13428.1  8 arallalGdpd.eAiallrralal 30
                ar++la+  ++ +A+ ++rral +
  MMETSP1325-20131115|1551_1 12 ARVMLASRLVAaAAAPAFRRALPR 35
                677777777761466699999865 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 1.5
   PF13428.1  11 llalGdpdeAiallrralalaPddaeall 39 
                 l a Gd+ eA++  +r l+la ++ ea+l
  MMETSP1325-20131115|1551_1  77 LQAKGDHNEAERERERQLRLALENNEARL 105
                 6788***************9999988886 PP

  == domain 3    score: 11.4 bits;  conditional E-value: 0.00052
   PF13428.1   6 alarallalGdpdeAiallrralalaPd 33 
                  la +l a Gd+d+A+ l+rr++a + +
  MMETSP1325-20131115|1551_1 118 SLASLLYAKGDYDGAEPLCRRMVAINET 145
                 599*******************998765 PP

  == domain 4    score: 14.1 bits;  conditional E-value: 6.9e-05
   PF13428.1   6 alarallalGdpdeAiallrrala.....laPddaealll 40 
                  lar+l++ Gd+d+A+ l rral+     l+Pd++e  l 
  MMETSP1325-20131115|1551_1 160 NLARLLEDKGDYDAAEPLHRRALEireavLGPDHPETALS 199
                 69*********************97777788999887765 PP

  == domain 5    score: 10.6 bits;  conditional E-value: 0.00095
   PF13428.1   5 lalarallalGdpdeAiallrrala.....la 31 
                   l+ +l++ G++d+A+ l rrala     l+
  MMETSP1325-20131115|1551_1 201 SNLGLLLMHKGELDAAEPLSRRALAirekaLG 232
                 67999*******************94444444 PP

  == domain 6    score: 9.8 bits;  conditional E-value: 0.0017
   PF13428.1   6 alarallalGdpdeAiallrralala 31 
                  la +l  +Gd ++A+ l+rral+ +
  MMETSP1325-20131115|1551_1 244 NLAGLLGTMGDIAAAEPLFRRALSVD 269
                 68999*****************9865 PP

  == domain 7    score: 6.2 bits;  conditional E-value: 0.024
   PF13428.1   7 larallalGdpdeAiallrrala.....l 30 
                 la +l   Gd+d+A+ l rral+     l
  MMETSP1325-20131115|1551_1 287 LASLLQSKGDYDAAELLHRRALEireavL 315
                 8999999**************98444444 PP

  == domain 8    score: 8.3 bits;  conditional E-value: 0.0051
   PF13428.1   7 larallalGdpdeAiallrralalaPdda 35 
                 la  l + Gd+++A+ l+rr la +   +
  MMETSP1325-20131115|1551_1 329 LATTLQDKGDYAAAVPLFRRGLAINEAAL 357
                 8889999***************9887655 PP

  == domain 9    score: 17.1 bits;  conditional E-value: 7.2e-06
   PF13428.1   6 alarallalGdpdeAiallrralala 31 
                  lar l ++G++d+A+ l+rrala++
  MMETSP1325-20131115|1551_1 370 NLARGLKDMGEYDQAEPLYRRALATC 395
                 699********************965 PP

  == domain 10    score: 11.2 bits;  conditional E-value: 0.00057
   PF13428.1   6 alarallalGdpdeAiallrralalaP 32 
                  la +l+a Gd  +A+ l+rrala + 
  MMETSP1325-20131115|1551_1 412 SLASLLEAKGDNTAAEPLFRRALAIDE 438
                 69*********************9764 PP

  == domain 11    score: 11.5 bits;  conditional E-value: 0.00047
   PF13428.1   4 llalarallalGdpdeAiallrrala.....l 30 
                 l  la +l a Gd d+A+ l+rrala     l
  MMETSP1325-20131115|1551_1 452 LSNLAGLLQAKGDNDAAEPLYRRALAirekaL 483
                 567999*******************9444334 PP

  == domain 12    score: 6.2 bits;  conditional E-value: 0.024
   PF13428.1   6 alarallalGdpdeAiallrrala.....laPddae 36 
                  la++l +  ++d+++ llrrala     ++P++++
  MMETSP1325-20131115|1551_1 496 NLAALLCDKSEYDAGEPLLRRALAikeavRGPHHPD 531
                 6999999999*************9666665565554 PP

  == domain 13    score: 12.1 bits;  conditional E-value: 0.00031
   PF13428.1   6 alarallalGdpdeAiallrralalaP 32 
                  la +l a Gd+d+A+ ll rala + 
  MMETSP1325-20131115|1551_1 538 NLASLLCAKGDFDGAVPLLGRALAINE 564
                 699********************9764 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1         7     5e+03      22      33 ..      76      87 ..      76      88 .. 0.86
   2 !   10.3   0.0   0.00082      0.59       9      33 ..     109     133 ..     107     134 .. 0.92
   3 ?    6.8   0.0     0.011       7.9      17      33 ..     159     175 ..     150     176 .. 0.88
   4 !    7.5   0.0    0.0068       4.9       9      33 ..     193     217 ..     177     218 .. 0.83
   5 ?   -2.3   0.0       9.2   6.6e+03       9      32 ..     235     258 ..     230     259 .. 0.64
   6 !   14.1   0.1     5e-05     0.036       8      33 ..     276     301 ..     273     302 .. 0.91
   7 !    8.5   0.0    0.0031       2.2      13      32 ..     323     342 ..     303     344 .. 0.81
   8 ?    3.4   0.0      0.14        98      17      33 ..     369     385 ..     355     386 .. 0.90
   9 ?    2.6   0.0      0.25   1.8e+02      13      33 ..     407     427 ..     387     428 .. 0.77
  10 ?    6.7   0.0     0.012       8.6       2      33 ..     430     469 ..     429     470 .. 0.83
  11 ?    5.6   0.0     0.026        19      10      30 ..     485     508 ..     471     511 .. 0.71
  12 ?    6.3   0.0     0.016        11       9      32 ..     529     552 ..     515     554 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 7
   PF13431.1 22 lllnnGdleeAe 33
                +l+++Gd+ eAe
  MMETSP1325-20131115|1551_1 76 ALQAKGDHNEAE 87
                5899******98 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00082
   PF13431.1   9 dPnnadaynnLAelllnnGdleeAe 33 
                 +P+ a++ n LA ll+++Gd++ Ae
  MMETSP1325-20131115|1551_1 109 HPDTANSVNSLASLLYAKGDYDGAE 133
                 7899999***************997 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.011
   PF13431.1  17 nnLAelllnnGdleeAe 33 
                  nLA+ll ++Gd++ Ae
  MMETSP1325-20131115|1551_1 159 SNLARLLEDKGDYDAAE 175
                 69************997 PP

  == domain 4    score: 7.5 bits;  conditional E-value: 0.0068
   PF13431.1   9 dPnnadaynnLAelllnnGdleeAe 33 
                 +P+ a ++ nL++ll  +G+l+ Ae
  MMETSP1325-20131115|1551_1 193 HPETALSLSNLGLLLMHKGELDAAE 217
                 466688999*************997 PP

  == domain 5    score: -2.3 bits;  conditional E-value: 9.2
   PF13431.1   9 dPnnadaynnLAelllnnGdleeA 32 
                 +P+ a +  nLA ll   Gd + A
  MMETSP1325-20131115|1551_1 235 HPDTATSVSNLAGLLGTMGDIAAA 258
                 333344445888888888887777 PP

  == domain 6    score: 14.1 bits;  conditional E-value: 5e-05
   PF13431.1   8 ldPnnadaynnLAelllnnGdleeAe 33 
                 ++P  a ++nnLA ll+++Gd++ Ae
  MMETSP1325-20131115|1551_1 276 NHPSTATSMNNLASLLQSKGDYDAAE 301
                 6788899****************997 PP

  == domain 7    score: 8.5 bits;  conditional E-value: 0.0031
   PF13431.1  13 adaynnLAelllnnGdleeA 32 
                 a + nnLA++l+++Gd++ A
  MMETSP1325-20131115|1551_1 323 ATSVNNLATTLQDKGDYAAA 342
                 66779************988 PP

  == domain 8    score: 3.4 bits;  conditional E-value: 0.14
   PF13431.1  17 nnLAelllnnGdleeAe 33 
                 +nLA+ l++ G++++Ae
  MMETSP1325-20131115|1551_1 369 HNLARGLKDMGEYDQAE 385
                 6**************97 PP

  == domain 9    score: 2.6 bits;  conditional E-value: 0.25
   PF13431.1  13 adaynnLAelllnnGdleeAe 33 
                 +   n LA ll ++Gd   Ae
  MMETSP1325-20131115|1551_1 407 SATVNSLASLLEAKGDNTAAE 427
                 666789**********98886 PP

  == domain 10    score: 6.7 bits;  conditional E-value: 0.012
   PF13431.1   2 yekaleld....Pnn....adaynnLAelllnnGdleeAe 33 
                 +++al++d    P++    a ++ nLA ll+++Gd + Ae
  MMETSP1325-20131115|1551_1 430 FRRALAIDeaalPDDhpqtATSLSNLAGLLQAKGDNDAAE 469
                 677777777777777777799****************997 PP

  == domain 11    score: 5.6 bits;  conditional E-value: 0.026
   PF13431.1  10 Pnn...adaynnLAelllnnGdle 30 
                 P++   a ++nnLA ll+++ +++
  MMETSP1325-20131115|1551_1 485 PEHpatASSLNNLAALLCDKSEYD 508
                 55566699***********99987 PP

  == domain 12    score: 6.3 bits;  conditional E-value: 0.016
   PF13431.1   9 dPnnadaynnLAelllnnGdleeA 32 
                 +P+ a +  nLA ll+++Gd++ A
  MMETSP1325-20131115|1551_1 529 HPDTALSVSNLASLLCAKGDFDGA 552
                 677777778************998 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.11        76       5      21 ..     117     133 ..     113     143 .. 0.86
   2 !   10.3   0.0   0.00059      0.43       6      30 ..     160     184 ..     158     187 .. 0.86
   3 ?    4.7   0.0     0.038        27       4      29 ..     200     225 ..     197     229 .. 0.82
   4 ?    3.5   0.0     0.092        66       7      31 ..     245     269 ..     243     272 .. 0.86
   5 !    9.4   0.1    0.0012      0.86       5      28 ..     285     308 ..     281     313 .. 0.80
   6 !    6.5   0.0    0.0099       7.1       5      31 ..     327     353 ..     323     356 .. 0.88
   7 ?    6.0   0.0     0.015        11      11      28 ..     375     392 ..     367     394 .. 0.85
   8 ?    5.3   0.0     0.024        17       6      32 ..     412     438 ..     408     440 .. 0.91
   9 ?    6.1   0.0     0.013       9.7       5      31 ..     453     479 ..     449     482 .. 0.86
  10 ?   -0.1   0.0       1.2   8.9e+02       7      31 ..     539     563 ..     537     566 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.11
                 TT---HHHHTT-HHHHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAk 21 
                 + l++++  +Gdyd A+
  MMETSP1325-20131115|1551_1 117 NSLASLLYAKGDYDGAE 133
                 57999*********997 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00059
                 T---HHHHTT-HHHHHHHHH---HH CS
   PF13181.1   6 nlGdiYrqlGdydkAkeylekalel 30 
                 nl+++++++Gdyd+A+   ++ale+
  MMETSP1325-20131115|1551_1 160 NLARLLEDKGDYDAAEPLHRRALEI 184
                 89*************9877777776 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.038
                 TTT---HHHHTT-HHHHHHHHH---H CS
   PF13181.1   4 yynlGdiYrqlGdydkAkeylekale 29 
                 + nlG++++ +G+ d+A+   ++al 
  MMETSP1325-20131115|1551_1 200 LSNLGLLLMHKGELDAAEPLSRRALA 225
                 569**************977666665 PP

  == domain 4    score: 3.5 bits;  conditional E-value: 0.092
                 ---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   7 lGdiYrqlGdydkAkeylekalelk 31 
                 l+ ++  +Gd+ +A+  +++al+ +
  MMETSP1325-20131115|1551_1 245 LAGLLGTMGDIAAAEPLFRRALSVD 269
                 6667889***************987 PP

  == domain 5    score: 9.4 bits;  conditional E-value: 0.0012
                 TT---HHHHTT-HHHHHHHHH--- CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekal 28 
                 +nl++++ ++Gdyd+A+   ++al
  MMETSP1325-20131115|1551_1 285 NNLASLLQSKGDYDAAELLHRRAL 308
                 79**************86555555 PP

  == domain 6    score: 6.5 bits;  conditional E-value: 0.0099
                 TT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekalelk 31 
                 +nl+ ++ ++Gdy +A   +++ l ++
  MMETSP1325-20131115|1551_1 327 NNLATTLQDKGDYAAAVPLFRRGLAIN 353
                 69999************9999988776 PP

  == domain 7    score: 6.0 bits;  conditional E-value: 0.015
                 HHHTT-HHHHHHHHH--- CS
   PF13181.1  11 YrqlGdydkAkeylekal 28 
                 ++++G+yd+A+  +++al
  MMETSP1325-20131115|1551_1 375 LKDMGEYDQAEPLYRRAL 392
                 789************998 PP

  == domain 8    score: 5.3 bits;  conditional E-value: 0.024
                 T---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   6 nlGdiYrqlGdydkAkeylekalelkp 32 
                  l+++++ +Gd  +A+  +++al ++ 
  MMETSP1325-20131115|1551_1 412 SLASLLEAKGDNTAAEPLFRRALAIDE 438
                 6899*******************9985 PP

  == domain 9    score: 6.1 bits;  conditional E-value: 0.013
                 TT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekalelk 31 
                  nl+ ++  +Gd d+A+  +++al + 
  MMETSP1325-20131115|1551_1 453 SNLAGLLQAKGDNDAAEPLYRRALAIR 479
                 578889999**************9885 PP

  == domain 10    score: -0.1 bits;  conditional E-value: 1.2
                 ---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   7 lGdiYrqlGdydkAkeylekalelk 31 
                 l++++  +Gd+d A   l +al ++
  MMETSP1325-20131115|1551_1 539 LASLLCAKGDFDGAVPLLGRALAIN 563
                 56666679******99999999886 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.5         3   2.1e+03      10      26 .]      76      92 ..      76      92 .. 0.84
   2 ?    5.8   0.0     0.027        20       7      26 .]     119     138 ..     117     138 .. 0.92
   3 !    7.9   0.0    0.0061       4.4       5      23 ..     159     177 ..     155     180 .. 0.88
   4 ?    6.6   0.0     0.015        11       3      26 .]     199     222 ..     197     222 .. 0.89
   5 ?    6.4   0.0     0.019        13       5      26 .]     243     264 ..     239     264 .. 0.91
   6 ?    0.3   0.0       1.7   1.2e+03       6      21 ..     286     301 ..     282     305 .. 0.84
   7 ?    7.2   0.0      0.01       7.3       6      26 .]     328     348 ..     325     348 .. 0.94
   8 !    9.1   0.0    0.0025       1.8       5      26 .]     369     390 ..     368     390 .. 0.94
   9 ?   -1.3   0.0       5.7   4.1e+03       7      26 .]     413     432 ..     412     432 .. 0.85
  10 !    7.9   0.0    0.0059       4.2       3      26 .]     451     474 ..     449     474 .. 0.92
  11 ?    2.4   0.0      0.34   2.5e+02       5      25 ..     537     557 ..     533     558 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 3
                HHHH-------HHHHHT CS
   PF07721.9 10 allalGdldeAraller 26
                al+a Gd+ eA++  er
  MMETSP1325-20131115|1551_1 76 ALQAKGDHNEAERERER 92
                68889*******98765 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.027
                 -HHHHHH-------HHHHHT CS
   PF07721.9   7 LArallalGdldeAraller 26 
                 LA +l+a Gd+d A+ l +r
  MMETSP1325-20131115|1551_1 119 LASLLYAKGDYDGAEPLCRR 138
                 8999************9997 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.0061
                 ---HHHHHH-------HHH CS
   PF07721.9   5 laLArallalGdldeAral 23 
                 ++LAr+l + Gd+d+A+ l
  MMETSP1325-20131115|1551_1 159 SNLARLLEDKGDYDAAEPL 177
                 79**************976 PP

  == domain 4    score: 6.6 bits;  conditional E-value: 0.015
                 HH---HHHHHH-------HHHHHT CS
   PF07721.9   3 allaLArallalGdldeAraller 26 
                  l++L+ +l + G+ld+A+ l +r
  MMETSP1325-20131115|1551_1 199 SLSNLGLLLMHKGELDAAEPLSRR 222
                 789****************98776 PP

  == domain 5    score: 6.4 bits;  conditional E-value: 0.019
                 ---HHHHHH-------HHHHHT CS
   PF07721.9   5 laLArallalGdldeAraller 26 
                 ++LA +l   Gd ++A+ l++r
  MMETSP1325-20131115|1551_1 243 SNLAGLLGTMGDIAAAEPLFRR 264
                 79999**************997 PP

  == domain 6    score: 0.3 bits;  conditional E-value: 1.7
                 --HHHHHH-------H CS
   PF07721.9   6 aLArallalGdldeAr 21 
                 +LA +l+  Gd+d+A+
  MMETSP1325-20131115|1551_1 286 NLASLLQSKGDYDAAE 301
                 6788888889999997 PP

  == domain 7    score: 7.2 bits;  conditional E-value: 0.01
                 --HHHHHH-------HHHHHT CS
   PF07721.9   6 aLArallalGdldeAraller 26 
                 +LA +l++ Gd+++A  l++r
  MMETSP1325-20131115|1551_1 328 NLATTLQDKGDYAAAVPLFRR 348
                 79****************997 PP

  == domain 8    score: 9.1 bits;  conditional E-value: 0.0025
                 ---HHHHHH-------HHHHHT CS
   PF07721.9   5 laLArallalGdldeAraller 26 
                 ++LAr l + G++d+A+ l +r
  MMETSP1325-20131115|1551_1 369 HNLARGLKDMGEYDQAEPLYRR 390
                 69*****************997 PP

  == domain 9    score: -1.3 bits;  conditional E-value: 5.7
                 -HHHHHH-------HHHHHT CS
   PF07721.9   7 LArallalGdldeAraller 26 
                 LA +l a Gd  +A+ l++r
  MMETSP1325-20131115|1551_1 413 LASLLEAKGDNTAAEPLFRR 432
                 677888889999***99997 PP

  == domain 10    score: 7.9 bits;  conditional E-value: 0.0059
                 HH---HHHHHH-------HHHHHT CS
   PF07721.9   3 allaLArallalGdldeAraller 26 
                  l++LA +l+a Gd d+A+ l +r
  MMETSP1325-20131115|1551_1 451 SLSNLAGLLQAKGDNDAAEPLYRR 474
                 689******************997 PP

  == domain 11    score: 2.4 bits;  conditional E-value: 0.34
                 ---HHHHHH-------HHHHH CS
   PF07721.9   5 laLArallalGdldeAralle 25 
                 ++LA +l a Gd+d A  ll 
  MMETSP1325-20131115|1551_1 537 SNLASLLCAKGDFDGAVPLLG 557
                 6888899999*******9996 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.012       8.8      24      77 ..     114     174 ..      95     175 .. 0.58
   2 !    7.1   0.0    0.0074       5.3       2      52 ..     126     183 ..     125     210 .. 0.83
   3 ?    5.9   0.0     0.017        12       1      57 [.     167     235 ..     167     242 .. 0.80
   4 ?    6.5   0.0     0.011       8.2       4      52 ..     254     309 ..     251     316 .. 0.73
   5 !   18.3   0.0   2.4e-06    0.0017       2      83 ..     294     390 ..     293     391 .. 0.76
   6 ?    6.1   0.0     0.015        11       7      82 ..     425     515 ..     419     517 .. 0.68
   7 ?    5.2   0.0     0.028        20       5      52 ..     465     523 ..     461     559 .. 0.68
   8 ?    2.2   0.0      0.24   1.8e+02       2      51 ..     504     563 ..     503     583 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.012
                 HHHCHHHHHHHHHH---HHHHHHHHHC......TSHCHCB..HHHHH...HHHHHHHHTT-HHHH CS
   PF12895.2  24 edaylyalAlclylngeykrAyellrk......leldsss..lgcry...llArcllklgkydeA 77 
                 ++++ +  A  ly  g+y+ A  l+r+        l +++   +       lAr l++ g+yd A
  MMETSP1325-20131115|1551_1 114 NSVNSL--ASLLYAKGDYDGAEPLCRRmvaineTTLGPRHpfTA--TsvsNLARLLEDKGDYDAA 174
                 444555..788888888888877777774444333333333211..1223446666666666655 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0074
                 TT-HHHHHHHHHHHCCC-ST.....-H.HHHCHHHHHHHHHH---HHHHHHHHHC.TS CS
   PF12895.2   2 qhnyknAlflaekllaespk.....dp.edaylyalAlclylngeykrAyellrk.le 52 
                 +++y+ A+ l+++++a + +      p  +++  +lA  l   g+y++A  l r+ le
  MMETSP1325-20131115|1551_1 126 KGDYDGAEPLCRRMVAINETtlgprHPfTATSVSNLARLLEDKGDYDAAEPLHRRaLE 183
                 679**************9999988633677788888***********99777666644 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.017
                 HTT-HHHHHHHHHHHCCC-ST....-H..HHHCHHHHHHHHHH---HHHHHHHHHC......TSHCHCB CS
   PF12895.2   1 eqhnyknAlflaekllaespk....dp..edaylyalAlclylngeykrAyellrk......leldsss 57 
                 ++++y+ A+ l +++l+        d+   + +l +l+l l++ ge ++A  l+r+      + l +++
  MMETSP1325-20131115|1551_1 167 DKGDYDAAEPLHRRALEIREAvlgpDHpeTALSLSNLGLLLMHKGELDAAEPLSRRalaireKALGPNH 235
                 5789**************988998833445568888**************9999998666665555565 PP

  == domain 4    score: 6.5 bits;  conditional E-value: 0.011
                 -HHHHHHHHHHHCCC-ST.....-H.HHHCHHHHHHHHHH---HHHHHHHHHC.TS CS
   PF12895.2   4 nyknAlflaekllaespk.....dp.edaylyalAlclylngeykrAyellrk.le 52 
                 ++  A+ l++++l+ +        p  ++++ +lA  l++ g+y++A  l r+ le
  MMETSP1325-20131115|1551_1 254 DIAAAEPLFRRALSVDEAvlgknHPsTATSMNNLASLLQSKGDYDAAELLHRRaLE 309
                 5677899999999998888886422466678889*************544443544 PP

  == domain 5    score: 18.3 bits;  conditional E-value: 2.4e-06
                 TT-HHHHHHHHHHHCCC-ST....-H.HHH.CHHHHHHHHHH---HHHHHHHHHC........TSHCHCB..HHHHHHH.HHHHHHTT-HHHHCCCHHH CS
   PF12895.2   2 qhnyknAlflaekllaespk....dp.eda.ylyalAlclylngeykrAyellrk........leldsss..lgcryll.ArcllklgkydeAiavLek 83 
                 +++y+ A++l +++l+        d+ ++a +  +lA +l+  g+y +A+ l+r+        l   +++   g+ +   Ar l ++g+yd+A+ ++ +
  MMETSP1325-20131115|1551_1 294 KGDYDAAELLHRRALEIREAvlgpDHrDTAtSVNNLATTLQDKGDYAAAVPLFRRglaineaaL--GANHpsTGAMVHNlARGLKDMGEYDQAEPLYRR 390
                 678999999999999999889987334444255558********************88888443..444432455555459************988876 PP

  == domain 6    score: 6.1 bits;  conditional E-value: 0.015
                 HHHHHHHHHCCC-ST....-H..HHHCHHHHHHHHHH---HHHHHHHHHC......TSHCHCBHHHHHHH.HHHHHHTT-..HHHHCCCHH CS
   PF12895.2   7 nAlflaekllaespk....dp..edaylyalAlclylngeykrAyellrk......leldssslgcryll.Arcllklgk..ydeAiavLe 82 
                  A+ l++++la +      d+   +++l +lA  l+  g+ ++A  l+r+      + l +++++++  l + ++l ++k  yd ++ +L 
  MMETSP1325-20131115|1551_1 425 AAEPLFRRALAIDEAalpdDHpqTATSLSNLAGLLQAKGDNDAAEPLYRRalaireKALGPEHPATASSLnNLAALLCDKseYDAGEPLLR 515
                 6888999999998777765224455588889999999999999999999998888888888885555533243333333334777777666 PP

  == domain 7    score: 5.2 bits;  conditional E-value: 0.028
                 HHHHHHHHHHHCCC-ST.....-H.HHHCHHHHHHHHHH---HHHHHHHHHC.....TS CS
   PF12895.2   5 yknAlflaekllaespk.....dp.edaylyalAlclylngeykrAyellrk.....le 52 
                  + A+ l++++la   k      p  +++l +lA  l+   ey++   llr+     + 
  MMETSP1325-20131115|1551_1 465 NDAAEPLYRRALAIREKalgpeHPaTASSLNNLAALLCDKSEYDAGEPLLRRalaikEA 523
                 567888888888888777776433567788889**********9998888887665433 PP

  == domain 8    score: 2.2 bits;  conditional E-value: 0.24
                 TT-HHHHHHHHHHHCCC-ST.....-H.HHHCHHHHHHHHHH---HHHHHHHHHC....T CS
   PF12895.2   2 qhnyknAlflaekllaespk.....dp.edaylyalAlclylngeykrAyellrk....l 51 
                 + +y+  + l++++la          p  + +  +lA  l+  g+++ A+ ll +    +
  MMETSP1325-20131115|1551_1 504 KSEYDAGEPLLRRALAIKEAvrgphHPdTALSVSNLASLLCAKGDFDGAVPLLGRalaiN 563
                 567777788888888887777776533244466678**********99999998874441 PP

>> PF07720.7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       9.1   6.6e+03      11      21 ..      77      87 ..      76      87 .. 0.85
   2 !   10.6   0.0   0.00047      0.34       6      21 ..     118     133 ..     114     135 .. 0.90
   3 ?    0.5   0.0       0.7     5e+02      14      23 ..     168     177 ..     167     185 .. 0.87
   4 !    7.7   0.0    0.0039       2.8       7      21 ..     287     301 ..     286     311 .. 0.89
   5 !    7.1   0.0    0.0058       4.1       7      24 ..     329     346 ..     328     347 .. 0.89
   6 ?    3.2   0.0     0.098        71      14      27 ..     378     389 ..     377     393 .. 0.86
   7 ?    3.6   0.0     0.071        51       6      34 ..     454     480 ..     451     481 .. 0.84
   8 ?   -1.5   0.0       2.9   2.1e+03       8      21 ..     540     553 ..     537     556 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 9.1
                HHHTT-HHHHH CS
   PF07720.7 11 fynkkkyqeAr 21
                +++k++ +eA+
  MMETSP1325-20131115|1551_1 77 LQAKGDHNEAE 87
                89****99996 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00047
                 HHHHHHHHTT-HHHHH CS
   PF07720.7   6 slAaefynkkkyqeAr 21 
                 slA  +y+k++y+ A+
  MMETSP1325-20131115|1551_1 118 SLASLLYAKGDYDGAE 133
                 89*************8 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.7
                 TT-HHHHHHH CS
   PF07720.7  14 kkkyqeArel 23 
                 k++y+ A+ l
  MMETSP1325-20131115|1551_1 168 KGDYDAAEPL 177
                 9******865 PP

  == domain 4    score: 7.7 bits;  conditional E-value: 0.0039
                 HHHHHHHTT-HHHHH CS
   PF07720.7   7 lAaefynkkkyqeAr 21 
                 lA  +++k++y+ A+
  MMETSP1325-20131115|1551_1 287 LASLLQSKGDYDAAE 301
                 7999*********98 PP

  == domain 5    score: 7.1 bits;  conditional E-value: 0.0058
                 HHHHHHHTT-HHHHHHH. CS
   PF07720.7   7 lAaefynkkkyqeArelf 24 
                 lA ++++k++y  A+ lf
  MMETSP1325-20131115|1551_1 329 LATTLQDKGDYAAAVPLF 346
                 799***********9884 PP

  == domain 6    score: 3.2 bits;  conditional E-value: 0.098
                 TT-HHHHHHH..HH CS
   PF07720.7  14 kkkyqeArelfsYa 27 
                 +++y++A+ l  Y+
  MMETSP1325-20131115|1551_1 378 MGEYDQAEPL--YR 389
                 89******99..76 PP

  == domain 7    score: 3.6 bits;  conditional E-value: 0.071
                 HHHHHHHHTT-HHHHHHH..HHHHHHH-T CS
   PF07720.7   6 slAaefynkkkyqeArelfsYallaildk 34 
                  lA  +++k++ + A+ l  Y+ + ++++
  MMETSP1325-20131115|1551_1 454 NLAGLLQAKGDNDAAEPL--YRRALAIRE 480
                 578889************..998888876 PP

  == domain 8    score: -1.5 bits;  conditional E-value: 2.9
                 HHHHHHTT-HHHHH CS
   PF07720.7   8 AaefynkkkyqeAr 21 
                 A  + +k++++ A+
  MMETSP1325-20131115|1551_1 540 ASLLCAKGDFDGAV 553
                 555668******98 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.35   2.5e+02      14      29 ..     168     183 ..     159     206 .. 0.85
   2 ?   -1.1   0.0       2.3   1.7e+03      15      29 ..     211     225 ..     207     228 .. 0.89
   3 !   10.7   0.6    0.0005      0.36       7      97 ..     245     345 ..     239     353 .. 0.71
   4 !    8.1   0.0    0.0032       2.3      14      30 ..     378     394 ..     365     400 .. 0.85
   5 ?    6.5   0.0      0.01       7.3       8      51 ..     414     455 ..     407     458 .. 0.79
   6 !   11.3   0.4   0.00032      0.23       6      51 ..     454     497 ..     449     563 .. 0.69
   7 ?   -0.2   0.0       1.2   8.8e+02      21      66 ..     511     561 ..     503     594 .. 0.55

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.35
   PF12688.2  14 tGeeakAvplYrrAla 29 
                  G+ ++A+pl rrAl+
  MMETSP1325-20131115|1551_1 168 KGDYDAAEPLHRRALE 183
                 6999**********97 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 2.3
   PF12688.2  15 GeeakAvplYrrAla 29 
                 Ge ++A+pl rrAla
  MMETSP1325-20131115|1551_1 211 GELDAAEPLSRRALA 225
                 8899*********97 PP

  == domain 3    score: 10.7 bits;  conditional E-value: 0.0005
   PF12688.2   7 ragarDstGeeakAvplYrrAl...aa..GLagarrrratiqlaSsLRnlGrveeslalleaelaea....pgdelddalaa.flALaLssagrereavai 97 
                  ag   + G+ a+A+pl+rrAl   +a  G +       +  laS L   G  + +  l +++l+ +    + d  d a+++  lA +L+++g+ ++av +
  MMETSP1325-20131115|1551_1 245 LAGLLGTMGDIAAAEPLFRRALsvdEAvlGKNHPSTATSMNNLASLLQSKGDYDAAELLHRRALEIReavlGPDHRDTATSVnNLATTLQDKGDYAAAVPL 345
                 58899999*************944223224444455566679************99998888776321122455666666652478899999999999865 PP

  == domain 4    score: 8.1 bits;  conditional E-value: 0.0032
   PF12688.2  14 tGeeakAvplYrrAlaa 30 
                  Ge ++A+plYrrAla 
  MMETSP1325-20131115|1551_1 378 MGEYDQAEPLYRRALAT 394
                 699************85 PP

  == domain 5    score: 6.5 bits;  conditional E-value: 0.01
   PF12688.2   8 agarDstGeeakAvplYrrAlaaGLagarrrratiqlaSsLRnl 51 
                 a+  +  G++++A+pl+rrAla  +++a  +    q a sL nl
  MMETSP1325-20131115|1551_1 414 ASLLEAKGDNTAAEPLFRRALA--IDEAALPDDHPQTATSLSNL 455
                 5566788**************8..57777777777777777776 PP

  == domain 6    score: 11.3 bits;  conditional E-value: 0.00032
   PF12688.2   6 eragarDstGeeakAvplYrrAlaaGLagarrrratiqlaSsLRnl 51 
                 + ag     G++++A+plYrrAla  ++++         aSsL nl
  MMETSP1325-20131115|1551_1 454 NLAGLLQAKGDNDAAEPLYRRALA--IREKALGPEHPATASSLNNL 497
                 568999999**************8..34444444444555555555 PP

  == domain 7    score: -0.2 bits;  conditional E-value: 1.2
   PF12688.2  21 vplYrrAla..aGLagarrrrati...qlaSsLRnlGrveeslalleaela 66 
                 +pl rrAla  + ++g +++ + +    laS L   G  + ++ ll ++la
  MMETSP1325-20131115|1551_1 511 EPLLRRALAikEAVRGPHHPDTALsvsNLASLLCAKGDFDGAVPLLGRALA 561
                 566666554333444444433332111577777777777777777766554 PP

>> PF10516.4  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.11        81      25      37 ..     179     191 ..     170     192 .. 0.88
   2 ?    1.6   0.0       0.2   1.4e+02      24      36 ..     220     232 ..     220     234 .. 0.84
   3 ?    2.5   0.0      0.11        79      25      37 ..     305     317 ..     294     318 .. 0.88
   4 ?    4.3   0.0     0.029        21      24      38 .]     472     486 ..     467     486 .. 0.92
   5 ?   -0.7   0.0       1.1   7.7e+02      24      34 ..     514     524 ..     514     528 .. 0.81
   6 ?   -3.1   0.0       6.2   4.5e+03      14      32 ..     546     564 ..     544     569 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.11
   PF10516.4  25 rkaLeLreqllpp 37 
                 r+aLe+re +l p
  MMETSP1325-20131115|1551_1 179 RRALEIREAVLGP 191
                 89******99887 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.2
   PF10516.4  24 lrkaLeLreqllp 36 
                 +r+aL++re+ l 
  MMETSP1325-20131115|1551_1 220 SRRALAIREKALG 232
                 59*******9776 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.11
   PF10516.4  25 rkaLeLreqllpp 37 
                 r+aLe+re +l p
  MMETSP1325-20131115|1551_1 305 RRALEIREAVLGP 317
                 89******99887 PP

  == domain 4    score: 4.3 bits;  conditional E-value: 0.029
   PF10516.4  24 lrkaLeLreqllppe 38 
                 +r+aL++re+ l pe
  MMETSP1325-20131115|1551_1 472 YRRALAIREKALGPE 486
                 8*********99876 PP

  == domain 5    score: -0.7 bits;  conditional E-value: 1.1
   PF10516.4  24 lrkaLeLreql 34 
                 lr+aL+++e +
  MMETSP1325-20131115|1551_1 514 LRRALAIKEAV 524
                 79******965 PP

  == domain 6    score: -3.1 bits;  conditional E-value: 6.2
   PF10516.4  14 nEnFpqAveDlrkaLeLre 32 
                 +++F+ Av  l +aL++ e
  MMETSP1325-20131115|1551_1 546 KGDFDGAVPLLGRALAINE 564
                 5678889988999999865 PP

>> PF04910.9  Transcriptional repressor TCF25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.022        16      35      87 ..     150     202 ..     145     211 .. 0.90
   2 ?    0.5   0.0      0.29   2.1e+02      34      81 ..     275     322 ..     256     337 .. 0.84
   3 ?   -0.8   0.0      0.69     5e+02      47      83 ..     372     408 ..     369     436 .. 0.77
   4 ?    3.5   0.0     0.035        25      35      87 ..     444     496 ..     437     507 .. 0.86
   5 ?   -0.7   0.0      0.67   4.8e+02      37      77 ..     527     569 ..     524     581 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.022
   PF04910.9  35 kyPYHvdtLlqlsevyreqgdfevAndlieraLfilervfhpsFsplllnass 87 
                 ++P+   +  +l+ +++ +gd+  A  l  raL i e v+ p+  +  l+ s+
  MMETSP1325-20131115|1551_1 150 RHPFTATSVSNLARLLEDKGDYDAAEPLHRRALEIREAVLGPDHPETALSLSN 202
                 699*************************************9999887777766 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.29
   PF04910.9  34 kkyPYHvdtLlqlsevyreqgdfevAndlieraLfilervfhpsFspl 81 
                 k++P    ++ +l+ +++ +gd+  A  l  raL i e v+ p+ +  
  MMETSP1325-20131115|1551_1 275 KNHPSTATSMNNLASLLQSKGDYDAAELLHRRALEIREAVLGPDHRDT 322
                 5666667788899************************99999988664 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.69
   PF04910.9  47 sevyreqgdfevAndlieraLfilervfhpsFsplll 83 
                 +  ++ +g++ +A  l  raL ++e ++ p+  + + 
  MMETSP1325-20131115|1551_1 372 ARGLKDMGEYDQAEPLYRRALATCEVSLGPDHPTTSA 408
                 5567889999999999999999999999988755444 PP

  == domain 4    score: 3.5 bits;  conditional E-value: 0.035
   PF04910.9  35 kyPYHvdtLlqlsevyreqgdfevAndlieraLfilervfhpsFsplllnass 87 
                  +P    +L +l+ +++ +gd+  A  l  raL i e+++ p+     ++ ++
  MMETSP1325-20131115|1551_1 444 DHPQTATSLSNLAGLLQAKGDNDAAEPLYRRALAIREKALGPEHPATASSLNN 496
                 6899999********************************99998776666655 PP

  == domain 5    score: -0.7 bits;  conditional E-value: 0.67
   PF04910.9  37 PYHvdtLlqlsevyr...eqgdfevAndlieraLfilervfhps 77 
                 P H dt l +s+++     +gdf  A  l+ raL i e ++h +
  MMETSP1325-20131115|1551_1 527 PHHPDTALSVSNLASllcAKGDFDGAVPLLGRALAINE-AVHGT 569
                 899999999888765222799************98887.55544 PP

>> PF13429.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.31   2.3e+02       8      27 ..     111     132 ..     104     176 .. 0.71
   2 ?   -0.7   0.0      0.73   5.3e+02     150     173 ..     285     308 ..     248     316 .. 0.61
   3 ?   -0.8   0.1      0.79   5.7e+02     146     174 ..     323     351 ..     284     361 .. 0.53
   4 ?   -1.2   0.0       1.1   7.6e+02     152     172 ..     371     391 ..     325     398 .. 0.49
   5 ?    1.1   0.0      0.21   1.5e+02     151     177 ..     412     438 ..     367     443 .. 0.81
   6 ?    7.5   0.1    0.0022       1.6     115     176 ..     412     479 ..     403     483 .. 0.78
   7 ?   -1.0   0.0      0.88   6.3e+02      13      37 ..     538     562 ..     526     595 .. 0.63

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.31
   PF13429.1   8 s..nealklAnllyakgdfkkA 27 
                 +  n +  lA+llyakgd+++A
  MMETSP1325-20131115|1551_1 111 DtaNSVNSLASLLYAKGDYDGA 132
                 442344478*********9988 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.73
   PF13429.1 150 laraellrqegqkkkAlrllrral 173
                   +a+ll+ +g+ ++A  l rral
  MMETSP1325-20131115|1551_1 285 NNLASLLQSKGDYDAAELLHRRAL 308
                 333444444444444444444444 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.79
   PF13429.1 146 alfllaraellrqegqkkkAlrllrrala 174
                 a+    +a+ l+++g+ ++A+ l+rr+la
  MMETSP1325-20131115|1551_1 323 ATSVNNLATTLQDKGDYAAAVPLFRRGLA 351
                 33333445555555555555555555555 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 1.1
   PF13429.1 152 raellrqegqkkkAlrllrra 172
                 +a+ l++ g+ ++A  l+rra
  MMETSP1325-20131115|1551_1 371 LARGLKDMGEYDQAEPLYRRA 391
                 333344445555555555555 PP

  == domain 5    score: 1.1 bits;  conditional E-value: 0.21
   PF13429.1 151 araellrqegqkkkAlrllrralalkp 177
                  +a+ll+ +g++ +A  l+rrala + 
  MMETSP1325-20131115|1551_1 412 SLASLLEAKGDNTAAEPLFRRALAIDE 438
                 468889999999999999999998776 PP

  == domain 6    score: 7.5 bits;  conditional E-value: 0.0022
   PF13429.1 115 salellerakdykrieellaslee.keaae.....qsalfllaraellrqegqkkkAlrllrralalk 176
                 s   lle+ +d ++ e l++++ + +eaa      q a+ l+ +a ll+ +g++++A  l+rrala  
  MMETSP1325-20131115|1551_1 412 SLASLLEAKGDNTAAEPLFRRALAiDEAALpddhpQTATSLSNLAGLLQAKGDNDAAEPLYRRALAIR 479
                 55667778888888888888876425554456666999***************************865 PP

  == domain 7    score: -1.0 bits;  conditional E-value: 0.88
   PF13429.1  13 klAnllyakgdfkkAlevLksaadk 37 
                 +lA+ll akgdf++A   L +a+  
  MMETSP1325-20131115|1551_1 538 NLASLLCAKGDFDGAVPLLGRALAI 562
                 67999*******9999888665443 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       1.1   7.9e+02       6      20 ..     119     133 ..     118     141 .. 0.77
   2 ?    1.5   0.0      0.62   4.5e+02       5      19 ..     160     174 ..     159     182 .. 0.90
   3 ?   -0.5   0.0       2.8     2e+03       5      19 ..     286     300 ..     286     303 .. 0.82
   4 ?    2.0   0.0      0.45   3.3e+02       5      25 ..     328     348 ..     328     348 .. 0.82
   5 ?    4.2   0.0     0.089        64       5      27 ..     370     392 ..     366     394 .. 0.85
   6 ?    0.6   0.0       1.2   8.6e+02       6      27 ..     413     434 ..     412     436 .. 0.84
   7 ?    3.5   0.1      0.15   1.1e+02       6      27 ..     456     476 ..     451     479 .. 0.77
   8 ?   -0.5   0.0       2.7     2e+03       6      27 ..     539     560 ..     537     562 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAl 20 
                 la ++y+ gd+d A 
  MMETSP1325-20131115|1551_1 119 LASLLYAKGDYDGAE 133
                 677888877***997 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.62
                 HHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeA 19 
                 +la++++  gd+d+A
  MMETSP1325-20131115|1551_1 160 NLARLLEDKGDYDAA 174
                 79*****988***99 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 2.8
                 HHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeA 19 
                 +la +++  gd+d+A
  MMETSP1325-20131115|1551_1 286 NLASLLQSKGDYDAA 300
                 5788888888***98 PP

  == domain 4    score: 2.0 bits;  conditional E-value: 0.45
                 HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealer 25 
                 +la  ++  gd+++A+ +++r
  MMETSP1325-20131115|1551_1 328 NLATTLQDKGDYAAAVPLFRR 348
                 5787788777******99986 PP

  == domain 5    score: 4.2 bits;  conditional E-value: 0.089
                 HHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealerli 27 
                 +la+ ++ +g++d+A  +++r +
  MMETSP1325-20131115|1551_1 370 NLARGLKDMGEYDQAEPLYRRAL 392
                 6888888899**********987 PP

  == domain 6    score: 0.6 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerli 27 
                 la ++++ gd ++A  +++r +
  MMETSP1325-20131115|1551_1 413 LASLLEAKGDNTAAEPLFRRAL 434
                 677888888******9**9987 PP

  == domain 7    score: 3.5 bits;  conditional E-value: 0.15
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerli 27 
                 ++l++ k+ d d+A  +++r +
  MMETSP1325-20131115|1551_1 456 AGLLQAKG-DNDAAEPLYRRAL 476
                 35666666.**********987 PP

  == domain 8    score: -0.5 bits;  conditional E-value: 2.7
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerli 27 
                 la ++ + gd+d A+ +l r +
  MMETSP1325-20131115|1551_1 539 LASLLCAKGDFDGAVPLLGRAL 560
                 777777777*****99998876 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1      0.24   1.7e+02      36      80 ..      79     123 ..      69     127 .. 0.77
   2 ?   -2.2   0.0       7.3   5.3e+03      59      79 ..     186     206 ..     158     212 .. 0.61
   3 ?    2.2   0.0       0.3   2.2e+02      64      84 ..     233     253 ..     207     253 .. 0.86
   4 ?    1.1   0.0      0.66   4.7e+02      64      82 ..     275     293 ..     262     295 .. 0.88
   5 ?    4.8   0.0     0.045        32      59      84 ..     354     379 ..     312     379 .. 0.82
   6 ?    1.4   0.0      0.55   3.9e+02      65      81 ..     402     418 ..     385     421 .. 0.86
   7 ?    0.7   0.0      0.88   6.4e+02      52      81 ..     431     460 ..     407     463 .. 0.68
   8 ?    0.4   0.0       1.1   7.7e+02      53      78 ..     474     499 ..     442     503 .. 0.47

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.24
   PF14357.1  36 ealeeedaseaedeslaerlneaverFeaeHPklagtlrnildsL 80 
                 ++ ++++a+ +++ +l+  l++  +r    HP+ a+ +++++  L
  MMETSP1325-20131115|1551_1  79 AKGDHNEAERERERQLRLALENNEARLGPHHPDTANSVNSLASLL 123
                 444556667777778888888888888899999999999998877 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 7.3
   PF14357.1  59 verFeaeHPklagtlrnilds 79 
                  +    +HP+ a  l n+   
  MMETSP1325-20131115|1551_1 186 EAVLGPDHPETALSLSNLGLL 206
                 444556888888888877655 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.3
   PF14357.1  64 aeHPklagtlrnildsLanmG 84 
                  +HP+ a  + n++  L  mG
  MMETSP1325-20131115|1551_1 233 PNHPDTATSVSNLAGLLGTMG 253
                 58******************9 PP

  == domain 4    score: 1.1 bits;  conditional E-value: 0.66
   PF14357.1  64 aeHPklagtlrnildsLan 82 
                 ++HP+ a  ++n++  L++
  MMETSP1325-20131115|1551_1 275 KNHPSTATSMNNLASLLQS 293
                 68************99987 PP

  == domain 5    score: 4.8 bits;  conditional E-value: 0.045
   PF14357.1  59 verFeaeHPklagtlrnildsLanmG 84 
                  +   a+HP+ ++++ n++  L+ mG
  MMETSP1325-20131115|1551_1 354 EAALGANHPSTGAMVHNLARGLKDMG 379
                 5667799******************9 PP

  == domain 6    score: 1.4 bits;  conditional E-value: 0.55
   PF14357.1  65 eHPklagtlrnildsLa 81 
                 +HP+ ++t+++++  L 
  MMETSP1325-20131115|1551_1 402 DHPTTSATVNSLASLLE 418
                 8***********99986 PP

  == domain 7    score: 0.7 bits;  conditional E-value: 0.88
   PF14357.1  52 aerlneaverFeaeHPklagtlrnildsLa 81 
                 +  l+   +   ++HP+ a  l n++  L+
  MMETSP1325-20131115|1551_1 431 RRALAIDEAALPDDHPQTATSLSNLAGLLQ 460
                 44444456667789*********9998887 PP

  == domain 8    score: 0.4 bits;  conditional E-value: 1.1
   PF14357.1  53 erlneaverFeaeHPklagtlrnild 78 
                   l+   +    eHP  a+ l+n++ 
  MMETSP1325-20131115|1551_1 474 RALAIREKALGPEHPATASSLNNLAA 499
                 33333444445566666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 1.13u 0.34s 00:00:01.47 Elapsed: 00:00:00.72
# Mc/sec: 2006.95
//
Query:       MMETSP1325-20131115|1559_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-24   82.3   5.7    2.4e-08   33.4   0.0    3.2  3  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
       0.11   12.1   0.1        6.8    6.4   0.0    2.8  3  PF02381.13 MraZ protein


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.0   3.5e-12   2.4e-08       4      38 ..      16      50 ..      13      51 .. 0.94
   2 !   30.6   0.8   2.7e-11   1.9e-07      10      39 .]      67      96 ..      60      96 .. 0.95
   3 !   19.5   0.0   8.3e-08   0.00057       2      39 .]     102     138 ..     101     138 .. 0.95

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 3.5e-12
                EEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  4 katlrgHtspVtcvafspdgpllasgSrDgtirlW 38
                 at +gH ++++c+a+spd++++a g +++ +++W
  MMETSP1325-20131115|1559_1 16 SATGEGHRGAISCIAYSPDSQHVAVGDANREVKVW 50
                57899****************************** PP

  == domain 2    score: 30.6 bits;  conditional E-value: 2.7e-11
                SSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27 10 HtspVtcvafspdgpllasgSrDgtirlWd 39
                Hts+V cva++p++++++sg  D ++++W+
  MMETSP1325-20131115|1559_1 67 HTSGVKCVAWDPTSTFVVSGAQDESLYVWN 96
                *****************************7 PP

  == domain 3    score: 19.5 bits;  conditional E-value: 8.3e-08
                 EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   2 eckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 + k++ ++H+++V++  +  + + +a+ ++Dg+i +W+
  MMETSP1325-20131115|1559_1 102 KKKQIKSAHKGGVNSAVYLNE-TTVATTGHDGCIAIWN 138
                 678999***************.***************7 PP

>> PF02381.13  MraZ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.034   2.3e+02      42      51 ..      48      57 ..      35      61 .. 0.84
   2 ?    0.2   0.0     0.082   5.6e+02      31      47 ..      82      98 ..      79     104 .. 0.84
   3 ?    6.4   0.0   0.00099       6.8      25      46 ..     119     139 ..     117     143 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.034
                EEEEHHHHHH CS
  PF02381.13 42 eiwdraeWeq 51
                 +w+ra+W +
  MMETSP1325-20131115|1559_1 48 KVWQRADWSK 57
                69******87 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.082
                BEEEE--BSSEEEEEHH CS
  PF02381.13 31 evvviGlencLeiwdra 47
                +vv  +++++L +w ++
  MMETSP1325-20131115|1559_1 82 FVVSGAQDESLYVWNMT 98
                678888999*****875 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.00099
                 HTT-SSBEEEE--BSSEEEEEH CS
  PF02381.13  25 eaklekevvviGlencLeiwdr 46 
                 +++++  v + G + c++iw +
  MMETSP1325-20131115|1559_1 119 YLNET-TVATTGHDGCIAIWNL 139
                 78899.9*************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 704.24
//
Query:       MMETSP1325-20131115|1555_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-21   74.9   0.3      8e-21   74.5   0.2    1.1  1  PF00106.20 short chain dehydrogenase
    3.3e-07   30.2   0.0    3.9e-07   30.0   0.0    1.1  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase
    1.5e-05   24.6   0.2    3.3e-05   23.5   0.1    1.6  1  PF08659.5  KR domain
      0.003   16.9   0.0     0.0058   15.9   0.0    1.5  1  PF01370.16 NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
        0.1   11.4   0.1       0.14   10.9   0.0    1.1  1  PF03435.13 Saccharopine dehydrogenase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   0.2   2.9e-24     8e-21       2     163 ..      62     237 .]      61     237 .] 0.88

  Alignments for each domain:
  == domain 1    score: 74.5 bits;  conditional E-value: 2.9e-24
                 EEEE---------HHHHHHHHHSSEEEEEEESS.SHHHHHHHHHHHHH---EEEEEE--TTSHHHHHHHHHHHH......HH----SEEEEE---TT-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH........HH...---EEEEEECHHHHSSTT.HHHHHHHCHHHCCHHHHH CS
  PF00106.20   2 tvliTGGlgglGlalArwLveegarhlvlvsrredapgaaeliaelealgaevtvvacDvadrdalaallaeir......kalgpldgvvhnagvlddgpleeltperlervlapkvtgawllheltld........ad...lgafvlfSSvagvlgspgqaaYaaakaaldalaesrr 163
                 +v+iTG+  g+G  lA  L+++g  + +++  + ++ +a ++ ++   + +++  v+ Dv++ +++++ ++ +       ka ++l++vv+nagv + gp + l+ ++++  ++++ +g + +++++l+        ++     ++v+++Svag+ + +  + Y+a+k+a +a++ ++r
  MMETSP1325-20131115|1555_1  62 AVVITGCDTGFGSSLAPALAADGYTVFACCLKK-ESMDAIKASKS--YASVSIIPVQTDVTNDESVRRTVEVVTawlegdKATRRLHAVVNNAGVGRGGPADMLDIKDYHIDMEVNYFGLVRTSKAFLPllketarsKSaayRPRIVNVTSVAGLTPCAFLGPYTASKHAAEAFTSALR 237
                 59********************99999999987.33333333333..34799999*************9998865555667899**********************************************99988761156799*******************************9987 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   1.4e-10   3.9e-07       5     128 ..      69     192 ..      67     236 .. 0.79

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 1.4e-10
                 ------HHHHHHHH---EEEE---HH------------------..----TT-SGGHHHHHHHHHHH.-.--BSEEEEEEE---T..TTS-GGG------HHHHHHHTHHHHHHHHHHGG..GB--- CS
   PF13561.1   5 dnsigwaiakalaeaGaevilttwvpaklkkkvqelakelpadv..vplDvtseedvselaekvkedlg.gkiDilvhsianspeervekplletsrkgllaalsisayslvsllkaalpknlmneg 128
                 d ++g + a ala+ G++v    +++++ ++++++ +     ++  v+ Dvt++e+v + +e v++ l  +k    +h++ n +    + p   ++ k+++  ++++++ lv+++ka+lp  l++e+
  MMETSP1325-20131115|1555_1  69 DTGFGSSLAPALAADGYTVFACCLKKES-MDAIKASKSYASVSIipVQTDVTNDESVRRTVEVVTAWLEgDKATRRLHAVVNNAGVGRGGPADMLDIKDYHIDMEVNYFGLVRTSKAFLP--LLKET 192
                 689**********************997.78998888877777768899************999997645455556666666666666788888899***********************..98887 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.1   1.2e-08   3.3e-05       3     118 ..      63     180 ..      62     237 .] 0.70

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 1.2e-08
                 EEE----SHHHHHHHHHHHH-----EEEEE--.---------HHHHHH-.---EEEEE--TTSHHHHHHHH----T......TS.---EEEE---------TTT--HHHHHHHHHHHHHHHHH CS
   PF08659.5   3 yLvtGGlgglGlelarwLaergarhlvllsrsaapdeeaeallaeleal.gaevtvvaaDvadrdavealleevea......eepplrGvvhaAgvlrdallaemtaedlaavlapKvtGawn 118
                 +++tG   g+G +la  La++g +  + + ++  ++    +++++ +++  +++  v+ Dv++ ++v++++e v+a      ++++l++vv+ Agv r ++ + ++ +d++  ++    G   
  MMETSP1325-20131115|1555_1  63 VVITGCDTGFGSSLAPALAADGYTVFACCLKK--ESM---DAIKASKSYaSVSIIPVQTDVTNDESVRRTVEVVTAwlegdkATRRLHAVVNNAGVGRGGPADMLDIKDYHIDMEVNYFGLVR 180
                 79*********************999999999..333...344444443369******************998864222221459****************9999999988777666655555 PP

>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.1e-06    0.0058       1     153 [.      63     235 ..      63     237 .] 0.78

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.1e-06
                 EEEE--------HHHHHHHHH-TEEEEESSCSTCCCCCCHHH.....TBEEEB--TT-HHHHHHHHHHH...........T.SEEEE--S---HHHCC.CSHHHHHHHHT---HHHHHHHHHHTT......EEEEEEEGGG---B..SSSCB-TTS----SSHHHHHHHHHHHHHHH CS
  PF01370.16   1 ilVtGatGfiGsalveallekgyevvnlirrtrseslatvri.....rvelveldltdkdalerlfaee...........qpdaVihlAaesgvdass.edpadfieanvegtlnlleaarkagv.....krflfasSsevygkd..aeqpikEetplgplspYaaaKlageklvea 153
                 +++tG     Gs l+ al++ gy+v + + +++s    + ++      +  v+ d+t++++++r ++ +           + +aV++ A+   v++    d  d+ + ++ + +n ++ +r+ ++     k    +  s+ y +   + + +   tp++ l pY a+K+a+e  + a
  MMETSP1325-20131115|1555_1  63 VVITGCDTGFGSSLAPALAADGYTVFACCLKKESMDAIKASKsyasvSIIPVQTDVTNDESVRRTVEVVtawlegdkatrRLHAVVNNAG---VGRGGpADMLDIKDYHIDMEVNYFGLVRTSKAflpllKETARSK-SAAYRPRivNVTSVAGLTPCAFLGPYTASKHAAEAFTSA 235
                 6899999999**************88777666666555555577888888899*************988888888888889999999999...45555566677777779999999999998888765544444444.5555555588888999999999999*****999987765 PP

>> PF03435.13  Saccharopine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   5.2e-05      0.14       1      65 [.      63     128 ..      63     133 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 5.2e-05
  PF03435.13   1 vlvlGa.GsvGqavaellarhgdvdeitvadrtlekaqalaaka..lglrveaialdvsnyeaLeall 65 
                 v++ G+  + G+++a+ la++g + ++  ++ ++e+++a++a++  +++ +++++ dv+n+e++ + +
  MMETSP1325-20131115|1555_1  63 VVITGCdTGFGSSLAPALAADG-Y-TVFACCLKKESMDAIKASKsyASVSIIPVQTDVTNDESVRRTV 128
                 6788999899**********96.6.7****************999999999***********977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.59
# Mc/sec: 962.60
//
Query:       MMETSP1325-20131115|1561_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-25   89.2   0.0      2e-25   89.0   0.0    1.0  1  PF04099.7 Sybindin-like family
    0.00059   19.6   0.0    0.00061   19.5   0.0    1.2  1  PF04628.8 Sedlin, N-terminal conserved region


Domain annotation for each model (and alignments):
>> PF04099.7  Sybindin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   0.0   2.9e-29     2e-25      30     141 ..      11     119 ..       3     121 .. 0.89

  Alignments for each domain:
  == domain 1    score: 89.0 bits;  conditional E-value: 2.9e-29
   PF04099.7  30 lstneklllasmlhslkaiasklspvkakeelqgssgievletdtfkLhclqtltGiKfvlitdtktnae.adsllrkiyelYsdyvlknPfysl..empircelFdeklkelle 141
                   +++++l+++ml+slk ++s +sp       +g+ g+++++t++f+Lh l+t tG++fvl+td++t  + +  l++++ +++++yv knP+y++  + pi + lF+++l+ +le
  MMETSP1325-20131115|1561_1  11 SADEDQKLIFGMLFSLKELVSNMSP------SKGTEGLHLVKTSHFTLHHLETATGLRFVLNTDSNTVGSlRSNLQHIYGHIFVEYVAKNPLYNPlnDDPIDSPLFERHLQAYLE 119
                 56899********************......67899***************************998765515667777779************976699**************97 PP

>> PF04628.8  Sedlin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   8.9e-08   0.00061      60     127 ..      49     116 ..       8     120 .. 0.83

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 8.9e-08
   PF04628.8  60 elavsafvtttklkflllhelsdskkkdedirqffqevhelyvktllNPFyee..nepikspaFdarvkk 127
                 + +     t+t+l+f+l ++++++    +++++++ +++  yv  + NP+y++  ++pi+sp F++++++
  MMETSP1325-20131115|1561_1  49 HFTLHHLETATGLRFVLNTDSNTVGSLRSNLQHIYGHIFVEYV--AKNPLYNPlnDDPIDSPLFERHLQA 116
                 555566689***********99999999999999999999998..579999753378********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 651.18
//
Query:       MMETSP1325-20131115|1560_1  [L=390]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0051   16.6   0.0      0.023   14.5   0.0    1.9  2  PF04607.12 Region found in RelA / SpoT proteins


Domain annotation for each model (and alignments):
>> PF04607.12  Region found in RelA / SpoT proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.11   1.5e+03       7      31 ..      62      86 ..      56      87 .. 0.80
   2 !   14.5   0.0   1.7e-06     0.023       4     102 ..     116     210 ..     113     218 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.11
                HHHHHHHHH---CCCCCCC-S--E- CS
  PF04607.12  7 ysiieKlrrkgkveekfeeitDlig 31
                ++++++  +k k+ ++fe++ Dli+
  MMETSP1325-20131115|1560_1 62 AELARRFAEKPKQLNTFESVDDLIA 86
                567777888888899*******997 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 1.7e-06
                 --HHHHHHHHHH---CCCCCCC-S--E-EEEEESSTTHHHHHHHHHHT-SSSEEEEEEEES---------EEEEEE------EEEEEEEEEEEHHHHHH CS
  PF04607.12   4 KsiysiieKlrrkgkveekfeeitDligiRvivefkddcykvlelvkklwdpkpkrfkdyiaepkengYrslHtvveaekgeekvlvEiQiRtiemeaw 102
                 K+ ++i eK+  +  ++ + +++ D++    ++ + ++ + +le +     +++ r kd +++p ++gYr + + +    +  ++++E+Q+   + +a+
  MMETSP1325-20131115|1560_1 116 KRRERIEEKMYAD--YNGDPRRVVDICRASCVFLTMTQLALALETLLAEAGLIVVRAKDRLNNPTSFGYRDMLLNI--RLNGGQHVAELQLHLAQIHAI 210
                 7778888888875..558999***************************************************9999..444456999**9987776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 1730.70
//
Query:       MMETSP1325-20131115|1562_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 430.46
//
Query:       MMETSP1325-20131115|1563_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          3    7.0   9.1        3.4    6.8   6.3    1.3  1  PF05308.6 Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   6.3   0.00025       3.4     180     208 ..       6      32 ..       1      78 [. 0.66

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00025
   PF05308.6 180 pteepelevppppppPpPlpavslqqsas 208
                    epe+ + pppppPpPl   +      
  MMETSP1325-20131115|1563_1   6 SPPEPEVPSVPPPPPPPPLELTPCS--QA 32 
                 3346655555666666665554433..33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       559  (0.0408865); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 589.87
//
Query:       MMETSP1325-20131115|1564_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 902.46
//
Query:       MMETSP1325-20131115|1566_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0055   16.4   0.1        1.1    9.3   0.0    2.6  2  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.051   13.1   0.0       0.11   12.0   0.0    1.7  1  PF12799.2  Leucine Rich repeats (2 copies)
      0.062   13.4   0.0        2.3    8.6   0.0    2.5  2  PF13504.1  Leucine rich repeat
      0.081   12.9   1.1        5.8    7.1   0.1    2.5  2  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00033       1.1       1      17 [.       3      24 ..       3      29 .. 0.71
   2 !    5.6   0.0    0.0059        20       2      17 ..      26      43 ..      25      51 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00033
                TESEEEETSSBCBC.....HHH CS
  PF00560.28  1 nLeeLdLsgNnlts.....lpp 17
                +L+ LdLs++++ +     lp 
  MMETSP1325-20131115|1566_1  3 KLKGLDLSDCQFMQgnikdLPQ 24
                6899******776555666665 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0059
                ESEEEETSS.BCB.CHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slpp 17
                ++ L+L g+  l+ ++ p
  MMETSP1325-20131115|1566_1 26 ITDLNLEGCwGLEgNITP 43
                678******999988655 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.2e-05      0.11       2      23 ..       3      29 ..       2      42 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.2e-05
   PF12799.2  2 nLevLdLsnN.....nIkdlppelanL 23
                +L+ LdLs++     nIkdlp ++  L
  MMETSP1325-20131115|1566_1  3 KLKGLDLSDCqfmqgNIKDLPQSITDL 29
                8999******888888*****988766 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00067       2.3       2      13 ..       3      14 ..       2      23 .. 0.69
   2 ?    2.3   0.0     0.088     3e+02       3      11 ..      26      34 ..      24      43 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00067
   PF13504.1  2 nLkeLdLsgnrL 13
                +Lk LdLs++++
  MMETSP1325-20131115|1566_1  3 KLKGLDLSDCQF 14
                6899******85 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.088
   PF13504.1  3 LkeLdLsgn 11
                 ++L+L g+
  MMETSP1325-20131115|1566_1 26 ITDLNLEGC 34
                589***999 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.1    0.0017       5.8       4      16 ..       4      16 ..       2      25 .. 0.75
   2 ?    4.8   0.2    0.0099        34       2      12 ..      24      34 ..      18      51 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0017
   PF13516.1  4 LtsLdLsnNqigd 16
                L+ LdLs++q+ +
  MMETSP1325-20131115|1566_1  4 LKGLDLSDCQFMQ 16
                777*******865 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.0099
   PF13516.1  2 knLtsLdLsnN 12
                +++t+L+L ++
  MMETSP1325-20131115|1566_1 24 QSITDLNLEGC 34
                689*****999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 366.50
//
Query:       MMETSP1325-20131115|1569_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 1182.55
//
Query:       MMETSP1325-20131115|1565_1  [L=446]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-47  160.4   2.9    3.2e-47  159.7   2.0    1.2  1  PF08603.6  Adenylate cyclase associated (CAP) C terminal
    5.2e-47  160.5   0.1    7.4e-47  160.0   0.1    1.1  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal
     0.0021   17.3   1.7     0.0043   16.3   1.1    1.5  1  PF07986.7  Tubulin binding cofactor C
  ------ inclusion threshold ------
      0.086   12.4   0.0       0.17   11.4   0.0    1.4  1  PF03792.8  PBC domain
      0.095   10.9   0.2       0.14   10.4   0.2    1.3  1  PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
       0.11   12.0   0.2       0.31   10.5   0.1    1.7  2  PF06295.7  Protein of unknown function (DUF1043)


Domain annotation for each model (and alignments):
>> PF08603.6  Adenylate cyclase associated (CAP) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.7   2.0   1.4e-50   3.2e-47       6     146 ..     287     427 ..     282     438 .. 0.95

  Alignments for each domain:
  == domain 1    score: 159.7 bits;  conditional E-value: 1.4e-50
                 EEE---EEEEE-BBS-S.S-EEEE--TT-EEEE-EEEEEEEEEE--BSEEEEEEEEEEEEEES-B----EEEEEE----EESS--SEEEEES-B---EE--SCGTT-EEEEES--S-EEEE----TT--EEEE----EEEEE CS
   PF08603.6   6 lelegkkwvvenfedek.elvleevelkqsvyifkCknstiqikgKvnaisldnckkvslvvdslvssvevvnsksvkvqvlgkvptisidktdgvqiyLskesleteivssksseiNinvpteedgdykElalpeqfktki 146
                 ++ +g +w ve +++e+  +++  ++ k+sv+i+ C ++ti+i+gKv+++s+d c+k+++++d+ +s++e+vnsk+++vqv++++pti idktdg+ +yLs+++l+++++ +ksse+N++ p+ e+gd++E+ +peqf++k+
  MMETSP1325-20131115|1565_1 287 FKRQGMRWCVEAQTSEDgVVEVAVTDVKHSVNIYGCFEATINITGKVKSVSIDACEKCKVLLDTSISAIELVNSKRMQVQVRETAPTIAIDKTDGILVYLSRDCLDAQFLCAKSSEMNVSWPD-ENGDFQEICIPEQFQHKL 427
                 56699***********96778999**************************************************************************************************9.9***************97 PP

>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.0   0.1   3.2e-50   7.4e-47      40     305 ..       6     269 ..       2     276 .. 0.83

  Alignments for each domain:
  == domain 1    score: 160.0 bits;  conditional E-value: 3.2e-50
                 XXXHHHHHHHHHHHHHHHHHHHHHHHHH-S----HHHHHHHHHHHHHHHHHHHHHS----HHHHHHHCHHHHHHHHH---TTCCGTTSTTHHHHHHHHTT---GGGGG--S----HHHHH---HHHHHHHHHHHH---....-HHHHHHHHHHHHHHHHHH.HHHHHHS----------..--CSC--XXXXXXXXXXXXX.XXXXXXX........XXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX.XXXXXXXXXXXXXX CS
  PF01213.14  40 agdpasveafdelvakalsefvelskklggeveeqaelvekafqlerallevAsksqkPdeeelaellkPiseeilevqklreknRsskeFnhLsavsegipllgWvavePkPvsyvkemkdsaqFytnrvlKefkes....dkkqveWvksylallkelk.aYiKeyhttGltWskkgdaaaaksalaavsasktaaPpp.PpppppPsvdtikdsvesaksdskgslgavFaelnkGeeitkgLkkvdddekthKn.pelraksgktsspk 305
                 ++ p+s++a+d+++a++l++f++   ++gg+ ++ ae+v++a +++ra l +Ask++k    + ++ l P +  ++ +qk      + ++ nh  +v eg+++l Wv++ePkP  +++++ + + F++n++  efk +    d++q ++ +++ ++l++l+  Y+Keyh tG+tW+ k        a+ a+s s++aaPp+ P+p+++P     k +  +a+   +g++ga+ a l    +  +gL kv++d++t++  ++  +k++++++pk
  MMETSP1325-20131115|1565_1   6 EELPKSITAYDDYCAETLTPFIAACAAIGGDANQCAEVVKEAWDAQRAYLLMASKCKKVTGPDCQN-LEPFKAIAAALQKANGLRLGRNFINHEKTVKEGLQALQWVTMEPKPREWIENFVGGSDFWSNKIRTEFKRNtdkfDQNQHDFCTHFHNMLDKLHkEYVKEYHLTGVTWNFKP------GAMDAKSFSAPAAPPAaPAPAAAP--AAAKPAAAAASGGDEGGIGALGAALKAKGNAASGLNKVTKDMQTWRAdYKGGDKPVPVAKPK 269
                 5679******************************************************87777654.677777777777777777788999********************************************9643344899***************626*************998......455666677777776515666666..444556777777789**********998899*************875133444555555555 PP

>> PF07986.7  Tubulin binding cofactor C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   1.1   1.9e-06    0.0043       3      54 ..     316     367 ..     312     390 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.9e-06
                 EEEE-S-BS-EEEE----S-EEEES-BS-EEE----SS-EEEES-BS-EEE- CS
   PF07986.7   3 svklenlsnctiylldplssltidnckdctivlgpvsgsvfiedcenckivv 54 
                 sv++  + ++ti ++++++s+ id c++c+++l +  +++ + + +++++ v
  MMETSP1325-20131115|1565_1 316 SVNIYGCFEATINITGKVKSVSIDACEKCKVLLDTSISAIELVNSKRMQVQV 367
                 6788899999***********************9999999999999998877 PP

>> PF03792.8  PBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.6e-05      0.17     115     144 ..     133     162 ..     117     167 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.6e-05
   PF03792.8 115 sqirqiyhaelekyekaCkeftehvenlLr 144
                 ++ir++++ +++k++++ ++f++h +n+L 
  MMETSP1325-20131115|1565_1 133 NKIRTEFKRNTDKFDQNQHDFCTHFHNMLD 162
                 69*************************996 PP

>> PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.2   6.1e-05      0.14     258     329 ..     182     255 ..     134     266 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 6.1e-05
   PF07462.6 258 lPkgvtaeakvtavvtppsadaaaapdsvrpagasgaasgstsaptaesvl.Gegaaatelqvvvk.lqdydee 329
                  P ++ a++ ++ ++ p+ + +aaap +++pa+a++++ +++ + + +  l  +g+aa+ l++v+k +q +  +
  MMETSP1325-20131115|1565_1 182 KPGAMDAKSFSAPAAPPAAPAPAAAPAAAKPAAAAASGGDEGGIGALGAALkAKGNAASGLNKVTKdMQTWRAD 255
                 5645555555666888888999999*************999999998876667888887788777625665555 PP

>> PF06295.7  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.8   6.4e+03      64      96 ..      48      80 ..      38      86 .. 0.67
   2 ?   10.5   0.1   0.00013      0.31      28      72 ..     133     174 ..     131     193 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 2.8
   PF06295.7 64 kDYkkLYqhmaksskellpeldakdnpFskkla 96
                 D ++ Y  ma   k++ +   ++ +pF+  +a
  MMETSP1325-20131115|1565_1 48 WDAQRAYLLMASKCKKVTGPDCQNLEPFKAIAA 80
                567777888888888877777777788877665 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00013
   PF06295.7  28 kkikkeLeeakaeleeqkkelkdhfaksaelletlakDYkkLYqh 72 
                 +ki+ e +++  ++++ +++   hf    ++l++l k+Y k Y+ 
  MMETSP1325-20131115|1565_1 133 NKIRTEFKRNTDKFDQNQHDFCTHFH---NMLDKLHKEYVKEYHL 174
                 799**********************7...69**********9964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.80u 0.38s 00:00:01.18 Elapsed: 00:00:00.56
# Mc/sec: 1908.53
//
Query:       MMETSP1325-20131115|1571_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|1568_1  [L=379]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-07   31.3   0.0    4.4e-07   29.4   0.0    1.8  2  PF12763.2  Cytoskeletal-regulatory complex EF hand
  ------ inclusion threshold ------
      0.027   13.6   0.2      0.062   12.5   0.1    1.6  1  PF00036.27 EF hand
      0.052   13.0   0.9      0.095   12.2   0.4    1.6  2  PF13833.1  EF-hand domain pair
        1.5    8.2   3.4       0.41    9.9   0.2    1.6  2  PF13202.1  EF hand
        2.3    7.9   5.2        2.7    7.6   3.6    1.1  1  PF03153.8  Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.61   1.7e+03      13      46 ..     258     291 ..     253     294 .. 0.82
   2 !   29.4   0.0   1.6e-10   4.4e-07      50     100 ..     327     375 ..     320     378 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.61
   PF12763.2  13 weifsglkpednkltgdkvapvlknskleedkle 46 
                  + f    p++ kl+  kv   l  + l+++ l 
  MMETSP1325-20131115|1568_1 258 EQFFWNSGPDKGKLSPAKVKDALMTTGLPKEVLR 291
                 5677788899999999999999999999998886 PP

  == domain 2    score: 29.4 bits;  conditional E-value: 1.6e-10
   PF12763.2  50 dladidedgkldfeefciamrlifdlvngeikdvPselPewlvpeskahlv 100
                 +l+did+dg+ld++ef +am l      ++   +P+elP  +vp sk+ l 
  MMETSP1325-20131115|1568_1 327 ELSDIDKDGMLDMDEFSVAMYLCRQ--SQSGFPMPAELPADVVPPSKRYLA 375
                 8********************9876..4566789*************9885 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.3e-05     0.062       9      26 ..     329     346 ..     325     349 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
                 HCTTTSSEBEHHHHHHHH CS
  PF00036.27   9 fDkDgdGkIsfeEfkeal 26 
                  D D+dG ++ +Ef  a+
  MMETSP1325-20131115|1568_1 329 SDIDKDGMLDMDEFSVAM 346
                 59************9998 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.6   4.4e+03       2      18 ..     268     284 ..     267     290 .. 0.72
   2 ?   12.2   0.4   3.5e-05     0.095      33      52 ..     328     347 ..     326     349 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.6
   PF13833.1   2 kGlItreeLkral.allg 18 
                 kG+++++  k+al ++ g
  MMETSP1325-20131115|1568_1 268 KGKLSPAKVKDALmTT-G 284
                 7899999989988554.4 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 3.5e-05
   PF13833.1  33 efDtdgdGkisfeEFcvlle 52 
                 + D+d+dG+++ +EF v+++
  MMETSP1325-20131115|1568_1 328 LSDIDKDGMLDMDEFSVAMY 347
                 67***************997 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.2       3.3     9e+03      18      24 ..     254     260 ..     254     260 .. 0.65
   2 ?    9.9   0.2   0.00015      0.41       9      22 ..     330     343 ..     330     346 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 3.3
                 HHHHHHH CS
   PF13202.1  18 reELkrl 24 
                 ++E++++
  MMETSP1325-20131115|1568_1 254 KDEFEQF 260
                 5788765 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00015
                 --S----B-HHHHH CS
   PF13202.1   9 DlNgDGkIsreELk 22 
                 D ++DG ++++E++
  MMETSP1325-20131115|1568_1 330 DIDKDGMLDMDEFS 343
                 89**********96 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.6     0.001       2.7      43     157 ..     126     244 ..     108     331 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.001
                 XXXXXXXXXXXXXXXXXXXX.XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXX CS
   PF03153.8  43 kvaefpwdeepqapaavqqlqqslqp.qaslavtaaaasqentpsssssaassaaaslpag..vpaestiktepgqllkvevpvmvtqnsanse.lqqpaqqraaqqlqqslgapassq 157
                  v ++ w  ++  ++ ++q+qq  q+  + +++++ +++ + + + + + a++ ++++ a+   pa++t ++ +  +++ ++ v+v+ ++++   ++  a+++++ +  +   a+as+ 
  MMETSP1325-20131115|1568_1 126 TVPQGVWAGKQFYARVQLQVQQPIQAtATAAPAQQYQQQATVAATATAAPAAPGNFTVTATeaPPAPPTAQQVETSNAQMASAVVVDDKVQGAAgAAAAAESNPFLDNDSAGAASASAT 244
                 45556666666555666655444444233333333222222222222222222333333335555666666666666666666666666666664444444443333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       573  (0.0419105); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 1681.89
//
Query:       MMETSP1325-20131115|1572_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-31  108.7   1.7    3.7e-31  108.2   1.2    1.2  1  PF07394.7 Protein of unknown function (DUF1501)


Domain annotation for each model (and alignments):
>> PF07394.7  Protein of unknown function (DUF1501)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.2   1.2   2.7e-35   3.7e-31     188     383 ..     109     292 ..      84     300 .. 0.83

  Alignments for each domain:
  == domain 1    score: 108.2 bits;  conditional E-value: 2.7e-35
   PF07394.7 188 riasyelafra.lmqseapeafdlsdeteatreaygrdaketksfgaqcLlarrlvergvrfvqvylggWDtHsnlekahkklakelDqalaaLlkdLkqrGllddTlVvwggEFGRtpkingnkGrDHnpkgftvwlaGGgvkgGrvyGatdelgyaavenpvhvrdlhatilhllgldherltyatlgrpfrltd 383
                   a+ e+a+++    +ea +++ + +  + t + +g++     s++a++++ar ++     +++ +  g+DtHs+    +++++k+l + l+ + +++ ++G++d+++Vv+ +EFGRt+++ng  G+DH ++g +++++GG+vkgGrv G+ ++  ++        +dl   +l+++++ ++  + +    +f++ d
  MMETSP1325-20131115|1572_1 109 WSANVEMALSRtEEVKEAVDGVTIGNTLKNTNNGFGKQL----SQVARLIAARDALNNEQAVFFTSVHGFDTHSDAGGMLSERMKSLNTELKKFKDEMVDQGMWDNVVVVVKSEFGRTVTSNGL-GTDH-AWGGNTFIVGGAVKGGRVLGTYPDDLSEEG-----AQDLGRGRLIPTTSFDQ--MWSGIVSWFGVND 292
                 456677777733222333334556666777777777776....79*******************************************************************************.****.*********************986655533.....36*********999999..8888888988855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.38s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 1579.64
//
Query:       MMETSP1325-20131115|1573_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 507.46
//
Query:       MMETSP1325-20131115|1575_1  [L=838]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-34  119.1  30.1      2e-34  119.1  20.8    3.5  4  PF00487.19 Fatty acid desaturase
      6e-16   58.4  12.4      6e-16   58.4   8.6    3.9  4  PF03798.11 TLC domain
     0.0011   18.6   0.0     0.0025   17.4   0.0    1.5  1  PF00173.23 Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   2.1      0.19   8.7e+02      96     181 ..      34     161 ..      24     173 .. 0.72
   2 ?   -1.9   0.3      0.34   1.6e+03      88     127 ..     194     233 ..     176     263 .. 0.51
   3 ?   -2.0   0.0      0.37   1.7e+03     114     155 ..     289     340 ..     281     386 .. 0.60
   4 !  119.1  20.8   4.3e-38     2e-34       4     255 ..     544     809 ..     506     811 .. 0.94

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.19
  PF00487.19  96 rllyrlllglllggllfllalerrklrkrrrrkg..........................................lalllallilalllalagl.llllsglgalllyvvplalaltvlllvnyleHy 181
                 ++++ l + +++++ + + ++    + ++++  g                                            ++   +++a ++a+a++ +l ++g  + l+ +v+  l+++++l    l+H 
  MMETSP1325-20131115|1575_1  34 YFFVGLTFCFCFFLQFVVRHFAILIIGQNNPKRGlaarvgvkvvsvlfdiiavvgglkelvapeegvvndpiygfsSHSQFHFAVAAGYFAWAAAvTLMYRGSKVSLAHHVACCLVYLLTLRPF-LHHI 161
                 5677777777777777777777777766666666666666777777777777777777777777777777777777777788888888888888877777788877777777777777766655.5565 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.34
  PF00487.19  88 rrpllklrrllyrlllglllggllfllalerrklrkrrrr 127
                  r ++ +  +++rl +gl + + + l  l +    +++++
  MMETSP1325-20131115|1575_1 194 LRMAHTVTFFVVRLGVGLPMSHGWVLEMLSQLESGTAHSF 233
                 4455555555555555555555555555555554444444 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 0.37
  PF00487.19 114 lalerrklrkrrrrkg..........lalllallilalllalaglllllsgl 155
                 +++e +k++  +r kg          + +l++++++ ++++++g++++ + +
  MMETSP1325-20131115|1575_1 289 VRDEPHKRPAVKRSKGalakalahfdQFILVNVFLFSAVIGVLGIMAGVDQF 340
                 5566666666666666666666666666666677777777777774443333 PP

  == domain 4    score: 119.1 bits;  conditional E-value: 4.3e-38
  PF00487.19   4 lllllalllaalllsilvnlaHealHgalfrsrrlnrvlglllalllgisslawrrsHlrhHhytgnae.kDpdsalr....rlirlaerrpllklrrllyrlllglllggllfllalerrklrkrrrrkg..........lalllallilalllalagl.llllsglgalllyvvplalaltvlllvnyleHygletednnaardfyenqlltssn.segswvlnllsgnlnyHieHHlfPgvpwyrLpelhprlreelkehgvryns 255
                   ++++++   l++++++n++H++lH +l++  r+n+ l +l+ +l   s++ w+++H+ +Hh ++n+  kDpd+a+     r +++ ++rp++++++ + r+ll +++ +    + l   +   +++ ++          + +  ++  l+ +  l+++ +++  ++ a +++++p  l++++++l + + H + +   ++++  f+ +q+ t+ +  + s ++ ++sg+ln +ieHH+fP + + +Lp+l++++++ +++h+v y +
  MMETSP1325-20131115|1575_1 544 GSWWALFATPSLAWLVIANYWHDGLHFSLSTDWRVNATLPYLFPWL--SSPWLWYHQHVIGHHCYTNVAhKDPDLAHApqlmREHNSIKWRPAHATQESWQRVLLIWSVAVGAGMQILSDVRANFKGTYNNvvpyksmetaRFYAHSAGRLFYFCSLFVWpWFVMPVWKAPVFAFFPITLFSWWFMLNSQINHLTAD-CAHAEDTRFFRHQIITAQDfGTQSAWCFFFSGGLNMQIEHHMFPCINHCHLPALQKKVMALCEKHNVKYDH 809
                 5799******************************************..78888*******9999999999******************************************9999999999999999988**********77777777777777777777999999**********************555***99.99999999999999999999************************************************986 PP

>> PF03798.11  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.4     0.089   4.1e+02     109     145 ..       6      47 ..       2      60 .. 0.66
   2 !   58.4   8.6   1.3e-19     6e-16       3     197 ..      73     258 ..      71     259 .. 0.78
   3 ?   -1.3   0.5      0.27   1.2e+03     127     145 ..     520     536 ..     511     597 .. 0.74
   4 ?   -5.7   4.1         3   1.4e+04     137     177 ..     687     725 ..     656     739 .. 0.54

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.089
  PF03798.11 109 stpflslrkilkylrgk....sklskdllfn.gvlfllsFfv 145
                 +tp+l ++k +  +r       k+++d +f  g+ f + Ff+
  MMETSP1325-20131115|1575_1   6 TTPILGVAKAFCETRLPwevsVKTTADGYFFvGLTFCFCFFL 47 
                 788888888888886667877333444455449999998874 PP

  == domain 2    score: 58.4 bits;  conditional E-value: 1.3e-19
  PF03798.11   3 aerlvsliqavlssvaglivlssspelwegyperivgathfllkayylfalgYflydllvlllyekkrkdfalmvlHHvitlfllllsyvrglgryglavlllhelstpflslrkilkylrgksklskdllfn.gvlfllsFfvcRlvlfpyl.illsyldvasisveaap.lvlpviclilllvLqllnlyWfyliv 197
                  +++vs+++ ++++v gl  l+  +e      +++++  +  +++ +++a+gYf++   v+l+y       ++ ++HHv+ ++++ll + r++++ +  ++ll+ +st ++ l+++ k ++         + n  ++ +++Ffv+Rl ++  +   ++     ++++ +a  +v++v+++++++++++ln+yW + ++
  MMETSP1325-20131115|1575_1  73 GVKVVSVLFDIIAVVGGLKELVAPEEGVV---NDPIYGFSSHSQFHFAVAAGYFAWAAAVTLMYRGS----KVSLAHHVACCLVYLLTL-RPFLHHIGNLFLLFQASTLLIDLSSCAKVMGLS-NH---HITNlRMAHTVTFFVVRLGVGLPMsHGWVLEMLSQLESGTAHsFVTVVFMIAVNALINVLNVYWSIGML 258
                 67899999999999999998888884444...44444556677778**********99999995544....489******999999999.9999999999********************444.44...455567************97765514444444444443333369999999999999********98776 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.27
  PF03798.11 127 klskdllfngvlfllsFfv 145
                 + ++++++  + ++++Ff+
  MMETSP1325-20131115|1575_1 520 TPQRWFMI--ITMMATFFL 536
                 44556666..788888875 PP

  == domain 4    score: -5.7 bits;  conditional E-value: 3
  PF03798.11 137 vlfllsFfvcRlvlfpylillsyldvasisveaaplvlpvi 177
                      +F +c l+++p+ ++ ++++     ++  ++   ++
  MMETSP1325-20131115|1575_1 687 HSAGRLFYFCSLFVWPW-FVMPVWKAPVFAFFP-ITLFSWW 725
                 44455677777788877.666666544333332.2222222 PP

>> PF00173.23  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   5.5e-07    0.0025      15      58 ..     403     443 ..     393     462 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 5.5e-07
                 EEEEECTTEEEETTTTTTTHTSTTHHHHTT---BHHHHHHHHHH CS
  PF00173.23  15 dswvvirgkVYDvskflkdhpggasailafaGkDaTeafenash 58 
                 + +  irg+ YD+  f  dhpgg  a+    G+D T++f +++h
  MMETSP1325-20131115|1575_1 403 PMYTRIRGEWYDLAHF--DHPGGPVALALCLGRDGTALF-ESHH 443
                 78999********966..*********************.7777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (838 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       627  (0.0458602); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.21u 0.35s 00:00:01.56 Elapsed: 00:00:00.67
# Mc/sec: 2997.23
//
Query:       MMETSP1325-20131115|1578_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|1570_1  [L=454]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1908.68
//
Query:       MMETSP1325-20131115|1579_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 749.50
//
Query:       MMETSP1325-20131115|1580_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|1581_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.75
# Mc/sec: 220.46
//
Query:       MMETSP1325-20131115|1576_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.01   15.7  16.1       0.01   15.7  11.2    5.6  6  PF09304.5 Cortexillin I, coiled coil


Domain annotation for each model (and alignments):
>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   1.2       0.1   1.4e+03      51      73 ..      20      42 ..       2      66 .. 0.47
   2 ?   15.7  11.2   7.5e-07      0.01       7     101 ..      72     168 ..      69     175 .. 0.89
   3 ?   -2.6   4.5      0.36   4.9e+03      33      93 ..     172     236 ..     167     246 .. 0.68
   4 ?    0.0   2.4     0.057   7.7e+02      32      67 ..     273     308 ..     266     330 .. 0.58
   5 ?    3.3  11.8    0.0054        74      26      95 ..     333     400 ..     314     408 .. 0.70
   6 ?   -1.3   0.2      0.14     2e+03       6      41 ..     429     453 ..     412     466 .. 0.46

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.1
   PF09304.5 51 aqkaerekrlrelqakidellkn 73
                a+    +   r+lq+ki +l ++
  MMETSP1325-20131115|1576_1 20 AEISGAQAASRNLQSKIRQLDQE 42
                44444444444444444433222 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 7.5e-07
   PF09304.5   7 leasknelankLagLersledekvsqeeLakqkdeLksllasleaqkaerekrlrelqakidel.lknl.ekeklakleLesrlskaekDkaileLk 101
                  + +k++l   +a Le +le+ k  ++ L+ q  +L++ l+  + +k++  k  +el a+i+el l n  e++ la l  +++++ ++ D   le+k
  MMETSP1325-20131115|1576_1  72 SDEEKKKLNAEIAVLEAELEGAKDKRKMLVTQCRKLNNELRGAQRKKEDSIKIQAELGARITELeLENAsEEQSLAALSSQKEKLMVQNDVMRLEVK 168
                 5778999999****************************************************974455426777999999999999****9999997 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 0.36
   PF09304.5  33 eeLakqkde...Lksllasleaqkaerekrlrelqakidellknlekekla.kleLesrlskaek 93 
                 + L  + d+   L+++++ l    +er++ ++  q   +  l+  e+ek    +eL  r+  +ek
  MMETSP1325-20131115|1576_1 172 DTLNSRADRvfgLENRQQQLALSMEERKQEIAVHQDVQKAQLRAAEEEKHRiMVELGGRRQAVEK 236
                 55544455556688999999999999999998777766777777777775414577777776666 PP

  == domain 4    score: 0.0 bits;  conditional E-value: 0.057
   PF09304.5  32 qeeLakqkdeLksllasleaqkaerekrlrelqaki 67 
                 +eeL ++ d+L +  +  e++    ++ l+ l+ k 
  MMETSP1325-20131115|1576_1 273 REELQREGDDLDQAIRKAEKETRAMDHTLKHLNDKN 308
                 566666666666666666666666666666555544 PP

  == domain 5    score: 3.3 bits;  conditional E-value: 0.0054
   PF09304.5  26 edekvsqeeLakqkdeLksllasleaqkaerekrlrelqakidellknlekeklakleLesrlskaekDk 95 
                 e+ k++q+ L k+k+eL+ l+  +e+++   e+  +    ++d+  + le+ +  ++e e +  k   Dk
  MMETSP1325-20131115|1576_1 333 EQSKLAQDALFKKKKELQRLQTDFEEDSRRLEQVQQ-QAQRLDDRAQHLENAQK-QMESELEAQKDMVDK 400
                 678**************9999999887766655444.34478888888876543.334444444444444 PP

  == domain 6    score: -1.3 bits;  conditional E-value: 0.14
   PF09304.5   6 eleasknelankLagLersledekvsqeeLakqkde 41 
                 ++e+ +++ +n                ++Lak+  e
  MMETSP1325-20131115|1576_1 429 RVESTQESTQN-----------VLYTLGQLAKEYPE 453
                 23333333333...........33333444555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2335  (0.170787); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                       107  (0.00782621); expected 13.7 (0.001)
Passed Fwd filter:                        65  (0.00475424); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.34u 1.34s 00:00:03.68 Elapsed: 00:00:01.52
# Mc/sec: 800.89
//
Query:       MMETSP1325-20131115|1583_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.43s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 380.29
//
Query:       MMETSP1325-20131115|1582_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-36  124.8   2.0    1.5e-36  124.4   1.4    1.1  1  PF06417.7 Protein of unknown function (DUF1077)


Domain annotation for each model (and alignments):
>> PF06417.7  Protein of unknown function (DUF1077)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.4   1.4   1.1e-40   1.5e-36       5     120 ..      99     210 ..      93     218 .. 0.90

  Alignments for each domain:
  == domain 1    score: 124.4 bits;  conditional E-value: 1.1e-40
   PF06417.7   5 skekseelklkkaweialapakslpMnlfmmYmsGnslqIfsimmvlmllvnpikallsinkaFkeleeekksnrgslllaklvyvllqllalavglyklssmgllptnssdwLaf 120
                 +k  ++++k+  a++ia+ap k+++Mn fmmYmsG++++Ifsim++ m l+npi+a++++nk+F+++ + ++    +++++kl++++l+ll l v+l+k++ mgllp++s+dw ++
  MMETSP1325-20131115|1582_1  99 KKLGKKNMKAAMAMNIATAPGKQIFMNGFMMYMSGSQINIFSIMITSMGLYNPINAIVNVNKSFARVDDGSH----DCTMPKLIFCALNLLSLCVALWKCKAMGLLPVTSADWTSY 210
                 44456788888999******************************************************9954....9************************************654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 1083.15
//
Query:       MMETSP1325-20131115|1584_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   13.6   0.0      0.054   13.4   0.0    1.3  1  PF06024.7 Nucleopolyhedrovirus protein of unknown function (DUF912)


Domain annotation for each model (and alignments):
>> PF06024.7  Nucleopolyhedrovirus protein of unknown function (DUF912)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.9e-06     0.054      47      95 ..      78     124 ..      38     130 .] 0.66

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.9e-06
   PF06024.7  47 diteeeskaekaqatnillisllavlcvlvllyviyYFvilrerqksst 95 
                    +e+++   a+ +++ l ++l v+ v+ ll ++yY +++  ++++s 
  MMETSP1325-20131115|1584_1  78 TE-SEDDDGATAAGMDTTL-VILLVIGVFALLGILYYCFFMAGKKSQSS 124
                 22.2233323344445444.45567899999999999777776555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       752  (0.0550029); expected 273.4 (0.02)
Passed bias filter:                      585  (0.0427882); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 610.84
//
Query:       MMETSP1325-20131115|1585_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|1586_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   11.2   1.2       0.12   10.8   0.9    1.1  1  PF10267.4 Predicted transmembrane and coiled-coil 2 protein


Domain annotation for each model (and alignments):
>> PF10267.4  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.9   8.5e-06      0.12     180     271 ..      71     152 ..       8     160 .. 0.44

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 8.5e-06
   PF10267.4 180 cssatsssadansnkggetgslagsaaaaqselslkklleeleeikeeqsrLeeslerLkeq...lkkdlklllesLqeeryraerLEeqlndlt 271
                 +s + s+s+++             s  ++qs +   ++ +  +  +    +L+ +   +k q   +++++ ++ es+++ r  +e+LEe++n  +
  MMETSP1325-20131115|1586_1  71 PSITRSDSINS-------------SPDKRQSLILTAQADARAKARQTFRGQLAGKGSLMKRQmdkFHSEIGMMKESINDTRDSMENLEEKVNMIL 152
                 11111111111.............22222222222222222333333344444444444432111555777777777777777777777777555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       622  (0.0454944); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.50
# Mc/sec: 1097.53
//
Query:       MMETSP1325-20131115|1588_1  [L=448]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-34  118.2   0.0    4.2e-34  117.4   0.0    1.4  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
      4e-09   35.7   0.0    1.5e-08   33.8   0.0    1.8  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    8.6e-07   28.6   0.3    5.6e-06   26.0   0.1    2.5  2  PF07728.9  AAA domain (dynein-related subfamily)
      2e-06   27.6   0.0    4.3e-06   26.5   0.0    1.7  1  PF13671.1  AAA domain
    1.2e-05   25.2   0.1      0.025   14.5   0.0    3.0  3  PF13401.1  AAA domain
    6.3e-05   23.6   0.1    0.00018   22.1   0.0    2.0  1  PF13207.1  AAA domain
    9.4e-05   22.7   0.6     0.0077   16.5   0.1    2.9  2  PF13191.1  AAA ATPase domain
     0.0001   22.5   0.0    0.00022   21.4   0.0    1.6  1  PF13238.1  AAA domain
    0.00023   20.7   0.1     0.0015   18.1   0.0    2.2  2  PF13245.1  Part of AAA domain
    0.00055   18.9   0.1     0.0026   16.8   0.0    2.0  2  PF06414.7  Zeta toxin
    0.00057   19.7   0.0     0.0016   18.2   0.0    1.7  1  PF07724.9  AAA domain (Cdc48 subfamily)
     0.0011   18.8   0.0     0.0023   17.8   0.0    1.6  1  PF13521.1  AAA domain
     0.0022   17.0   0.0     0.0033   16.4   0.0    1.3  1  PF06745.8  KaiC
  ------ inclusion threshold ------
      0.015   15.0   0.0      0.029   14.1   0.0    1.5  1  PF04851.10 Type III restriction enzyme, res subunit
      0.019   15.0   0.0      0.033   14.2   0.0    1.5  1  PF00910.17 RNA helicase
       0.03   13.6   0.0        0.2   11.0   0.0    2.1  2  PF00158.21 Sigma-54 interaction domain
      0.043   12.6   0.0        3.4    6.3   0.0    2.3  2  PF05673.8  Protein of unknown function (DUF815)
      0.062   12.3   0.0       0.29   10.1   0.0    2.0  2  PF01078.16 Magnesium chelatase, subunit ChlI
      0.085   12.6   0.0       0.18   11.6   0.0    1.6  1  PF13173.1  AAA domain
       0.14   11.6   0.0       0.23   10.9   0.0    1.5  1  PF13086.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.4   0.0   6.2e-37   4.2e-34       1     131 [.     230     357 ..     230     358 .. 0.96

  Alignments for each domain:
  == domain 1    score: 117.4 bits;  conditional E-value: 6.2e-37
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH.SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHHTTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr.sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkieie 131
                 vl+ GppGtGKTl+a+ +a+ +g++++ + + +++sk+ ges+k+++e+f++++e     ++fiDE+d+la+sr sg+ +e ++r+++  l+ ++g++   sk ++i+atnr ++ldpall +Rfd ++ ++
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRCGRPMVHVAVEKIVSKWYGESSKNLAEVFDACEELG--AVIFIDEVDSLATSRnSGDMHEATRRLLSVVLQRVEGLEGA-SKSTLICATNRRQDLDPALL-SRFDLQLTFQ 357
                 799*************************************************99997..***************9999*********************6.77******************.****998875 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   2.2e-11   1.5e-08      47     204 ..     224     384 ..     206     405 .. 0.78

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 2.2e-11
   PF05496.7  47 eealdhvllyGpPGlGkttlakiiakelgvel......kvtsgPvlekagdlaalltnlee.kdvlfideihrlsraveevlysamedfkldivigkGpsarsvkldlpkftlvgattraglltsPlrdrfgivarlefyeveelkeivkrsakileveieeega 204
                 ++    vl+ GpPG Gkt  a+i+a+  g  +      k+ s    e +++la ++ + ee + v+fide+  l+++ +           l +v+++ ++ +      +k tl+ at r   l   l +rf ++  ++  +++  ++i +r ak l+ e ++e a
  MMETSP1325-20131115|1588_1 224 SNRPRAVLFEGPPGTGKTLTARILARRCGRPMvhvaveKIVSKWYGESSKNLAEVFDACEElGAVIFIDEVDSLATSRNSGDMHEATRRLLSVVLQRVEGLEGA----SKSTLICATNRRQDLDPALLSRFDLQLTFQLPNEKARRAIFNRYAKQLSDESKTEFA 384
                 3445679*******************998655211222344445557789******99987478**********998876544444556788888877666544....689******************************************999876665543 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.1   8.2e-09   5.6e-06       2     139 .]     230     350 ..     229     350 .. 0.77
   2 ?   -1.8   0.0         3     2e+03      11      64 ..     363     416 ..     362     427 .. 0.79

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 8.2e-09
                 EEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------.G-SEEEEESGGG--.-HHHHHHHHHHHSSEEE..----EEE---.......-EEEEE-SS--.-TT-TTHHHHTT- CS
   PF07728.9   2 vlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar.egeilvlDEverae.sevlnsLlslleerrlllpeggelvkaknddlleknfrviatanpldrslnelspalrsRf 139
                 vl  GppGtgK+  a+ la++ +r+++ v+  +      ++ ++    g+ s   +++ +a++  g+++++DEv+ +  s   + ++        +l +   +  +  +  +  + ++i ++n+++    +l+pal+sRf
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRCGRPMVHVAVEK------IVSKWY---GESSKNLAEVFDACEeLGAVIFIDEVDSLAtSRNSGDMHEATR----RLLSVVLQRVEGLEG-A-SKSTLICATNRRQ----DLDPALLSRF 350
                 8999*************************9988......999998...8999999********78**********6654444455544433....322322222222222.1.1389999999999....9********9 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 3
                 -HHHHHHHGGGGB..S--EEEEE--TT--HHHH---B--.........-------- CS
   PF07728.9  11 gKselaerlaeal..nreveyvqltrdtteedlkgrreiangttslvdsplvraar 64 
                 +++ +  r+a+ l  ++++e    +++++ +d+k   e    ++++v ++++++++
  MMETSP1325-20131115|1588_1 363 ARRAIFNRYAKQLsdESKTEFAKASEGLSCRDIKEICE--HAERRWVAKIIKKEVT 416
                 56777888888888888888888899999999999888..5788888777776665 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   6.3e-09   4.3e-06       2      82 ..     230     340 ..     229     393 .. 0.87

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 6.3e-09
   PF13671.1   2 vllvGlpGsGKstlaerllkklg..yvrlsqdtlrkrlfgtdqqskt............................dytrvlkrlyqilnklarkalsagrsvivdatnlsr 82 
                 vl+ G+pG+GK+  a+ l++++g  +v++    + ++++g+ +++++                            d  +++ rl+ +++++++    a +s+++ atn+++
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRCGrpMVHVAVEKIVSKWYGESSKNLAevfdaceelgavifidevdslatsrnsgDMHEATRRLLSVVLQRVEGLEGASKSTLICATNRRQ 340
                 89*************************************99888888999999999999999999999999988777778888999999999999999999*****99885 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.6e-05     0.025       4      28 ..     227     251 ..     223     265 .. 0.83
   2 ?    6.2   0.0     0.014       9.4      79     111 ..     275     314 ..     269     321 .. 0.73
   3 ?    0.2   0.0         1   6.8e+02      11      69 ..     323     384 ..     318     411 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.6e-05
   PF13401.1   4 agilvvtGesGvGKTtllrrlarql 28 
                  + +++ G++G+GKT+++r lar+ 
  MMETSP1325-20131115|1588_1 227 PRAVLFEGPPGTGKTLTARILARRC 251
                 5788999*************99985 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.014
   PF13401.1  79 lqealrrrrt..rlliiDEaqrL.....seealeelrsll 111
                 l+e+ +++++   ++ iDE++ L     s ++ e  r+ll
  MMETSP1325-20131115|1588_1 275 LAEVFDACEElgAVIFIDEVDSLatsrnSGDMHEATRRLL 314
                 4555555666666**********87654488888877775 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 1
   PF13401.1  11 GesGvGKTtllrrlarqldeeaeaae.karvvfveapastspkellqkllsalglpakg..r 69 
                 G  G+ K+tl+    r++d  ++       ++++++p+++  ++++++ +++l ++ k    
  MMETSP1325-20131115|1588_1 323 GLEGASKSTLICATNRRQDLDPALLSrFDLQLTFQLPNEKARRAIFNRYAKQLSDESKTefA 384
                 66777788888777777766555444555566999999999999999999999988777552 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   2.6e-07   0.00018       2      51 ..     230     280 ..     229     397 .. 0.70

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 2.6e-07
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG.B--GGGS-B--.---B--SS CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd.llreeglkeld.dgereskd 51 
                 +++ GppG+GK+  a+ La+r g p+++      ++  +++   ++  e +d
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRCGRPMVHVAVeK-IVSKWYGESsKNLAEVFD 280
                 6889*******************8887766521.667777443144433333 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   1.1e-05    0.0077      20      60 ..     223     264 ..     209     324 .. 0.72
   2 ?    2.4   0.1      0.23   1.6e+02      28      97 ..     321     390 ..     305     403 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.1e-05
   PF13191.1  20 segsp.lllvtGpsGiGKSsLlrelakpillerlrfaagkfd 60 
                  + +p ++l+ Gp+G+GK+  +r la++  +  + +a +k++
  MMETSP1325-20131115|1588_1 223 ESNRPrAVLFEGPPGTGKTLTARILARRCGRPMVHVAVEKIV 264
                 333445*****************9777766666666666555 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.23
   PF13191.1  28 vtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn....lpysaiiqa.lrellrqlltelaaelggwreal 97 
                 v G  G  KS+L+ +       +r   +++  +++       lp + ++ a +   ++ql++e+++e++ + e l
  MMETSP1325-20131115|1588_1 321 VEGLEGASKSTLICA-----TNRRQDLDPALLSRFDLQltfqLPNEKARRAiFNRYAKQLSDESKTEFAKASEGL 390
                 668899999***988.....7777777777777777775556555555555899999999999999998877655 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   3.2e-07   0.00022       1      39 [.     230     268 ..     230     298 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 3.2e-07
   PF13238.1   1 IlitGtpGvGKtTlakeLaerlgdvlrdlakengleeev 39 
                 +l+ G+pG+GKt +a++La+r+g  + ++a e+ +++++
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRCGRPMVHVAVEKIVSKWY 268
                 6899******************99999999998877765 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   2.2e-06    0.0015      12      48 ..     229     258 ..     219     277 .. 0.81
   2 ?   -0.8   0.0       1.7   1.2e+03      25      54 ..     311     340 ..     308     340 .. 0.66

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 2.2e-06
   PF13245.1  12 llvvtGgPGtGKTttlaaiiaallaarekpgrsvllv 48 
                  ++  G+PGtGKT + a+i a+++      gr  + v
  MMETSP1325-20131115|1588_1 229 AVLFEGPPGTGKT-LTARILARRC------GRPMVHV 258
                 34559********.9999999998......5555555 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 1.7
   PF13245.1  25 ttlaaiiaallaarekp.grsvllvaptgra 54 
                 + l+ ++ ++++ + ++  +s l++a ++r+
  MMETSP1325-20131115|1588_1 311 RRLLSVVLQRVEGL-EGaSKSTLICATNRRQ 340
                 55666666777543.3447899999999986 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.8e-06    0.0026       8      49 ..     218     259 ..     212     265 .. 0.84
   2 ?   -1.1   0.0       1.1   7.4e+02     133     150 ..     361     378 ..     356     417 .. 0.51

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.8e-06
   PF06414.7   8 kk.vpeqekpkavllgGqpGAGKtslaellleelaagnivrid 49 
                 ++   e+ +p+avl  G+pG GKt +a+ l ++  ++ +v++ 
  MMETSP1325-20131115|1588_1 218 TRaRYESNRPRAVLFEGPPGTGKTLTARILARRC-GRPMVHVA 259
                 44446789*************************9.99999885 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 1.1
   PF06414.7 133 elSelgilqRyeeelaek 150
                 e ++ +i +Ry ++l+ +
  MMETSP1325-20131115|1588_1 361 EKARRAIFNRYAKQLSDE 378
                 556666666666662221 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.3e-06    0.0016       6      87 ..     230     303 ..     226     323 .. 0.86

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 2.3e-06
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--.-EEEETGGG-------- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG.ivllDEidKihpkessg 87 
                 +l+ gp g+Gkt++a+ la+       ++++ +   ++      + + ++ +  ++   + ee G ++++DE+d  + + +++
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRCG----RPMVHVAVEKIVS----KWYGESSKNLAEVFDACEELGaVIFIDEVDSLATS-RNS 303
                 799******************98....7*****9999999....9999999999999999999999********99993.333 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   3.3e-06    0.0023       2      52 ..     230     281 ..     229     314 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 3.3e-06
   PF13521.1   2 ivitGgpstGKTtlleaLaar.gypvvpEvarevleeklakgeealpweedl 52 
                 + + G+p+tGKT +++ La+r g p+v+ ++ +++++ +++  ++l +++d+
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRcGRPMVHVAVEKIVSKWYGESSKNLAEVFDA 281
                 7789***************999******999999999999999888887443 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   4.8e-06    0.0033      19     110 ..     227     316 ..     209     368 .. 0.83

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 4.8e-06
   PF06745.8  19 grvvlitGepGtGKtifalqFlikgaeeygepgvfvtveesaedlr.enakslgwdlekleeegklaiidasesaeeea.eedleelieklaea 110
                  r+vl  G pGtGKt+ a       a++ g+p v v+ve   ++ + e+ k+l   +++ ee g +++id + s +++  + d++e +++l ++
  MMETSP1325-20131115|1588_1 227 PRAVLFEGPPGTGKTLTARIL----ARRCGRPMVHVAVEKIVSKWYgESSKNLAEVFDACEELGAVIFIDEVDSLATSRnSGDMHEATRRLLSV 316
                 578999**********99754....355699*********9966652677899999**************999988766766666666665544 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   4.2e-05     0.029      11      69 ..     214     270 ..     197     331 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.2e-05
  PF04851.10  11 aienllesiekedekkrglivmaTGtGKTlvaasliarlarkflflvprkelleqalee 69 
                 + +++++ +e++ + + +l++ + GtGKTl+a  l+ r+ r  + ++  ++++++++ e
  MMETSP1325-20131115|1588_1 214 MAKKTRARYESN-RPRAVLFEGPPGTGKTLTARILARRCGRPMVHVA-VEKIVSKWYGE 270
                 567778888888.9999***************965555555554444.45566666655 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.8e-05     0.033       1      73 [.     230     309 ..     230     338 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4.8e-05
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkkl.....klkkkdsvys.rnpeddfwdgYtgqevvvi.dDfgqvkdeenpsdlael 73 
                 +++ Gp+g+GK+++a+ La++  + +     +++ ++++    ++  +++d +++  +v++ d++ +  ++ n  d++e 
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILARRCGRPMvhvavEKIVSKWYGEsSKNLAEVFDACEELGAVIFiDEVDSLATSRNSGDMHEA 309
                 5789*******************999888865555444444566778999999966555550555555444366655544 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00029       0.2      11      47 ..     214     252 ..     205     277 .. 0.72
   2 ?    0.2   0.0       0.6   4.1e+02      94     109 ..     286     301 ..     266     358 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00029
                 HHHHHHHHTTS-..S-EEEE-------HHHHHHHHHTST CS
  PF00158.21  11 lleqikkvaktd..ltvlitGesGtGKellAraiheask 47 
                 + +++++  +++    vl +G  GtGK+l Ar + ++  
  MMETSP1325-20131115|1588_1 214 MAKKTRARYESNrpRAVLFEGPPGTGKTLTARILARRCG 252
                 4555444444443489****************9977554 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.6
                 ---EEEET-----HHH CS
  PF00158.21  94 gGtLfLDeigelplel 109
                 g ++f+De+ +l ++ 
  MMETSP1325-20131115|1588_1 286 GAVIFIDEVDSLATSR 301
                 6789999999987654 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.005       3.4      37     152 ..     211     339 ..     180     345 .. 0.64
   2 ?    3.8   0.0      0.03        21     182     218 ..     346     382 ..     343     394 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.005
   PF05673.8  37 keallenteqflkglpannvLLwGarGtGKSslvkallneyaeegLrl.ie..vek...edlkdlpkivellrerperfilfvDDL........sFeeeeeeyksLksvLe..GsleakpenvliyatsNrR 152
                  +++++ t++  + ++ + vL+ G  GtGK  + + l +++ +  +++ +e  v+k   e+ k+l +++++ +e     ++f+D +        s + +e++ + L +vL+   +le +++  li at NrR
  MMETSP1325-20131115|1588_1 211 FDEMAKKTRARYESNRPRAVLFEGPPGTGKTLTARILARRCGRPMVHVaVEkiVSKwygESSKNLAEVFDACEELG--AVIFIDEVdslatsrnSGDMHEATRRLLSVVLQrvEGLEGASKSTLICAT-NRR 339
                 36788899999999999**************999999999988874432222222222255666677777666654..46666554322332222334455556667777633367777777777777.444 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.03
   PF05673.8 182 LsdRFGltlgFhkldqdeYleivkklakklgleleke 218
                 L  RF l+l+F+ ++++   +i +++ak+l+ e ++e
  MMETSP1325-20131115|1588_1 346 LLSRFDLQLTFQLPNEKARRAIFNRYAKQLSDESKTE 382
                 778************************9998777654 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00042      0.29      25      43 ..     230     248 ..     226     266 .. 0.88
   2 ?   -1.6   0.0       1.6   1.1e+03     180     200 ..     337     357 ..     323     363 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00042
  PF01078.16  25 lllvGppGsGKtmlakrlp 43 
                 +l+ GppG+GKt+ a+ l+
  MMETSP1325-20131115|1588_1 230 VLFEGPPGTGKTLTARILA 248
                 89***********999775 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.6
  PF01078.16 180 rYlsklsgplldRidlqvevk 200
                 + ++ l  +ll R+dlq++ +
  MMETSP1325-20131115|1588_1 337 NRRQDLDPALLSRFDLQLTFQ 357
                 4566788899*****998875 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00026      0.18       3      74 ..     228     298 ..     226     341 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00026
   PF13173.1   3 kilvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe.llelfleklkekkkylflDEiqevp 74 
                 ++++ +Gp ++GKt +++ la++    + ++ +++++   + + +++ +l ++++  +e   ++f+DE+  + 
  MMETSP1325-20131115|1588_1 228 RAVLFEGPPGTGKTLTARILARRCG--RPMVHVAVEKIVSKWYGESSkNLAEVFDACEELGAVIFIDEVDSLA 298
                 78999************99999888..999999999976655444434444444443445688******9874 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00034      0.23      16      41 ..     227     251 ..     213     415 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00034
   PF13086.1  16 ssgitliqGpPgtGKtttivelisql 41 
                  +   l +GpPgtGKt t   l ++ 
  MMETSP1325-20131115|1588_1 227 PR-AVLFEGPPGTGKTLTARILARRC 251
                 33.589**********8776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.93u 0.40s 00:00:01.33 Elapsed: 00:00:00.62
# Mc/sec: 1731.56
//
Query:       MMETSP1325-20131115|1587_1  [L=298]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-14   53.9   0.0    1.8e-14   53.3   0.0    1.2  1  PF02675.10 S-adenosylmethionine decarboxylase


Domain annotation for each model (and alignments):
>> PF02675.10  S-adenosylmethionine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   1.3e-18   1.8e-14       1      94 [.     103     201 ..     103     209 .. 0.90

  Alignments for each domain:
  == domain 1    score: 53.3 bits;  conditional E-value: 1.3e-18
  PF02675.10   1 hllvdlygcdadeledaerlekilteaaeaagatvlniafhkf.....epqGvsvvvllaESHisiHtwpEsgyaaiDvftCgeisplkaleylieale 94 
                 h+l+d+ +   +  e ae   ++++ea+++ g+  ++ ++        +p G+++ vl+ ESH++ H + E+g +aiDvftCg  sp+  ++ li++l 
  MMETSP1325-20131115|1587_1 103 HVLLDFADFYLEANEAAELTIRAMREAVAEWGVREVHHKMVVLgedglSPPGFTAAVLIDESHVTAHCYSEQGWLAIDVFTCGVHSPHGIARSLIARLL 201
                 889999999999999999999*************9999999886655567**************************************99999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       588  (0.0430076); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.42s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 1275.20
//
Query:       MMETSP1325-20131115|1591_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0021   18.5   0.1      0.042   14.3   0.0    2.6  3  PF01448.19 ELM2 domain
     0.0029   17.2   0.7      0.025   14.2   0.1    2.4  2  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF01448.19  ELM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   6.1e-06     0.042       2      15 ..      24      37 ..      23      51 .. 0.90
   2 ?   -2.0   0.0      0.73     5e+03      21      36 ..      89     104 ..      82     116 .. 0.56
   3 ?    1.1   0.0     0.084   5.7e+02      21      36 ..     126     141 ..     120     164 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 6.1e-06
  PF01448.19  2 rVGskYQAkIPelg 15
                rVG +YQA +Pe++
  MMETSP1325-20131115|1591_1 24 RVGCEYQAVVPEYR 37
                9***********97 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.73
  PF01448.19  21 eqdkregedqllWePg 36 
                  +d+ +++ +l ++ +
  MMETSP1325-20131115|1591_1  89 GEDDAQPRGTLRYPEE 104
                 4555555666655433 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.084
  PF01448.19  21 eqdkregedqllWePg 36 
                 +q++ +   + lW P+
  MMETSP1325-20131115|1591_1 126 AQSQSPVSSEALWTPN 141
                 455555588999***8 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1   3.7e-06     0.025      14      34 ..     101     121 ..      96     124 .. 0.90
   2 ?    0.6   0.0     0.069   4.7e+02      11      19 ..     163     171 ..     162     172 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.7e-06
                 --HHHHHHHHHHTTTSHHHHH CS
  PF00627.26  14 fsreeakkALratnnnvErAv 34 
                 +++e++++AL+++ n+v +A 
  MMETSP1325-20131115|1591_1 101 YPEEQVLEALYRARNDVAAAE 121
                 89****************995 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.069
                 H----HHHH CS
  PF00627.26  11 eMGfsreea 19 
                 eMG+s+ e+
  MMETSP1325-20131115|1591_1 163 EMGYSTAEV 171
                 9****9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|1589_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-16   59.7   0.0      9e-16   58.8   0.0    1.5  1  PF13602.1  Zinc-binding dehydrogenase
    7.8e-14   51.2   0.0    1.5e-13   50.2   0.0    1.5  1  PF00107.21 Zinc-binding dehydrogenase
    6.1e-08   32.2   0.1    2.9e-06   26.9   0.0    2.4  2  PF08240.7  Alcohol dehydrogenase GroES-like domain


Domain annotation for each model (and alignments):
>> PF13602.1  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0     2e-19     9e-16       1     125 [.     197     324 ..     197     326 .. 0.81

  Alignments for each domain:
  == domain 1    score: 58.8 bits;  conditional E-value: 2e-19
   PF13602.1   1 lGadevidyrdedf...lagdgvDvvldtvg.eageelleallrvl.ggGrlvsigg.......klltaaareggaarkllflfsvkaneeraeeleelaalveaGklkpvvdrvfpLeeaaeAhrrlesgrarGKi 125
                 lGad v+d ++ed+   +  ++ D+v+d+ g ++ +   ++++++l +gG +v ++g       +  ++a  + + +++ + lf ++++  ++e+l+++a  +++  l++ vd+++ Le+ a+A+ r  +g+++GK+
  MMETSP1325-20131115|1589_1 197 LGADVVVDFTQEDVfdtVPDSSLDLVFDNYGaNGTA---QLAHNALrPGGWYVFLAGgtgpgicE--EPAC-TPKEGVNQISLF-TDSS--GHEDLDAIATIADSQGLTVNVDSSYALEDSADAMSRQMTGETMGKV 324
                 8*********88888*965688*********44444...55666676656699999569**8653..3333.445677777788.4666..8888******************99*********************9 PP

>> PF00107.21  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   3.3e-17   1.5e-13       1     126 [.     165     284 ..     165     291 .. 0.88

  Alignments for each domain:
  == domain 1    score: 50.2 bits;  conditional E-value: 3.3e-17
                 ----HHHHHHHHH--EEEEEESSHHHHHHHHH----EEEETTTS-HHHHHHHHTTT--BSEEEEET-.CTHHHHHHHCB-----EEEC----EEEEEEEHHHHHHCT--EEE--SSSHHHHHHHHH CS
  PF00107.21   1 GvGlaavqlAkalGarviavdsseeklelakelGadhvinskdedfvkaireltggkgvdvviecvgagatfeqalkllapgGrvvvvggtsganvefdlrklllkektiqGsllgnpeeleealq 126
                 G G++ vqlAk +Ga  + +++ ++ l ++ elGad v++ ++e     + +  ++   d+v++  ga+ t + a ++l+pgG  v+++g + ++  +  + ++ ke   q sl+ +    +e+l+
  MMETSP1325-20131115|1589_1 165 GTGSLGVQLAKKMGAAWVRAAAAPDHLSYVTELGADVVVDFTQE----DVFDTVPDSSLDLVFDNYGANGTAQLAHNALRPGGWYVFLAGGT-GPGICEEPACTPKEGVNQISLFTD-SSGHEDLD 284
                 89************99999999*******************887....699999999*********************************98.888888888888888888888777.55555554 PP

>> PF08240.7  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   6.3e-10   2.9e-06       2      62 ..      32      89 ..      31      93 .. 0.92
   2 ?    2.8   0.0     0.019        86      88     104 ..      98     114 ..      92     118 .. 0.81

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 6.3e-10
                TEEEEEEEEB---HHHHHHH--.TTTT--SSEE----BE-EEEEE----B------EEEE- CS
   PF08240.7  2 gevlvkvkaaGiCgsDlhivkgekelevklplilGhEivGiveevgegvkklkvGdrvvve 62
                gevl++v++ +++  D ++ ++        p+ lG +++G+v++vg ++++l+v d+v  +
  MMETSP1325-20131115|1589_1 32 GEVLIQVHTSSVNPVDWKLAEQ---GLYLSPSQLGADVSGVVVSVGAECTRLQVDDEVWSD 89
                89***************99998...5888999************************99765 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.019
                 --B-----BSEEEECGG CS
   PF08240.7  88 gvkldGgfaeyvvvpek 104
                 g + +G++aeyv vpe+
  MMETSP1325-20131115|1589_1  98 GGHGKGAWAEYVSVPED 114
                 55679**********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 1618.76
//
Query:       MMETSP1325-20131115|1592_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|1590_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-08   34.7   0.0    1.4e-08   34.2   0.0    1.2  1  PF13806.1 Rieske-like [2Fe-2S] domain


Domain annotation for each model (and alignments):
>> PF13806.1  Rieske-like [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0     1e-12   1.4e-08       2     103 ..      50     161 ..      49     162 .. 0.93

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 1e-12
   PF13806.1   2 Wvpvcklddlvpetg.vaalvdgeqvalfrlekeevyAienldPaskanvlsrGlvgdlkgelvvasPlykqhfdLktGecle..............deevslkvypvrvedgkvev 103
                 +v+ ++l+dl++  + v a+v+g  v++++ +++ +yA++ + P +   +l +G+vg++    ++++  y++ f+L+tG++                 ++  +++y+v+ ++  ++v
  MMETSP1325-20131115|1590_1  50 YVNAIPLSDLPKPGSaVGAVVGGLDVCIAVGTDGLIYALGGKAPPT-GTPLKDGKVGKN----TIKDAQYGTEFNLETGAVEGkwcpggigfivgklVAPEGVPTYRVKKSGAFIQV 161
                 89999*****98766488999************************5.89********96....*****************9999*************999*********99999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.66
# Mc/sec: 693.49
//
Query:       MMETSP1325-20131115|1595_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.058   12.7   0.0       0.13   11.5   0.0    1.6  1  PF10855.3 Protein of unknown function (DUF2648)


Domain annotation for each model (and alignments):
>> PF10855.3  Protein of unknown function (DUF2648)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   9.8e-06      0.13       6      20 ..      58      72 ..      56      73 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 9.8e-06
   PF10855.3  6 viLvlagaafygFKK 20
                +  +++ +++++FKK
  MMETSP1325-20131115|1595_1 58 IEWTIGIGLYVAFKK 72
                5569**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 601.64
//
Query:       MMETSP1325-20131115|1596_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0088   15.7   0.3       0.17   11.7   0.1    2.4  2  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.027   13.6   1.1        2.3    7.6   0.1    2.6  2  PF00036.27 EF hand
      0.052   13.4   0.1       0.14   12.0   0.0    1.7  2  PF09279.6  Phosphoinositide-specific phospholipase C, efhand-like
      0.093   12.1   0.1        0.2   11.0   0.0    1.6  2  PF05186.8  Dpy-30 motif
        0.1   12.6   0.2       0.71    9.9   0.0    2.1  2  PF13499.1  EF-hand domain pair
       0.11   11.5   0.0       0.34   10.0   0.0    1.7  2  PF01523.11 Putative modulator of DNA gyrase


Domain annotation for each model (and alignments):
>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1   7.7e-05      0.17       2      23 ..      87     108 ..      86     118 .. 0.88
   2 ?    1.7   0.0      0.12   2.7e+02      13      26 ..     141     154 ..     131     160 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 7.7e-05
                 HH---GCC-------B---HHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELr 23 
                 l+++F++fD+ ++G + ++E++
  MMETSP1325-20131115|1596_1  87 LKDIFDKFDTGQTGSVVRAEML 108
                 799*************999986 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.12
                 ----B---HHHHHH CS
   PF13405.1  13 gdGkidaeELrdaL 26 
                 + G+i++e + d +
  MMETSP1325-20131115|1596_1 141 KEGTITFEKFADGM 154
                 679*****999877 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1     0.001       2.3       2      17 ..      87     102 ..      86     112 .. 0.89
   2 ?    4.5   0.1    0.0097        22      15      28 ..     143     156 ..     140     157 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.001
                 HHHHHHHHCTTTSSEB CS
  PF00036.27   2 lkeaFkefDkDgdGkI 17 
                 lk++F++fD+ ++G +
  MMETSP1325-20131115|1596_1  87 LKDIFDKFDTGQTGSV 102
                 89********999975 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0097
                 SEBEHHHHHHHHHH CS
  PF00036.27  15 GkIsfeEfkealkk 28 
                 G+I+fe f + +++
  MMETSP1325-20131115|1596_1 143 GTITFEKFADGMME 156
                 9*********9985 PP

>> PF09279.6  Phosphoinositide-specific phospholipase C, efhand-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.8   4.1e+03      18      24 ..      23      29 ..       9      35 .. 0.55
   2 ?   12.0   0.0   6.3e-05      0.14       2      67 ..      87     154 ..      87     157 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.8
                HHHHHHH CS
   PF09279.6 18 aeeLrrF 24
                +e L+++
  MMETSP1325-20131115|1596_1 23 KEMLHEY 29
                2334444 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 6.3e-05
                 HHHHHHHH.--.--SSEEHHHHHHHHHHTS--TT---HHHHHHHHHH---HHHHHTTEE-----HHHH CS
   PF09279.6   2 ieelfkey.se.nkevltaeeLrrFLneeQkeerlteeeakaiiekyepneelkkkglLslegFlryL 67 
                 ++++f+++ ++ +++v+ ae L+ F++++    +  ++++ +i ++ e  ++ kk+g +++e F   +
  MMETSP1325-20131115|1596_1  87 LKDIFDKFdTGqTGSVVRAEMLVGFMEDKSILLSSFPKHTSEIPQALELLDCGKKEGTITFEKFADGM 154
                 689*****655689************9999999999***************************98655 PP

>> PF05186.8  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     9e-05       0.2       8      33 ..      20      45 ..      19      47 .. 0.85
   2 ?   -3.4   0.0       2.8   6.4e+03      16      21 ..     152     158 ..     151     160 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 9e-05
   PF05186.8  8 ktvaPiLlqGLtelakeRPeDPiefL 33
                ++v   L + L+++   +P+DPi+fL
  MMETSP1325-20131115|1596_1 20 THVKEMLHEYLRRVLLNKPDDPISFL 45
                6777788888999999*********9 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 2.8
   PF05186.8  16 qGLte.l 21 
                 +G++e l
  MMETSP1325-20131115|1596_1 152 DGMMEcL 158
                 6999944 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0004      0.91      35      63 ..      80     108 ..      13     111 .. 0.73
   2 ?    9.9   0.0   0.00031      0.71       2      63 ..      87     151 ..      85     154 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0004
   PF13499.1  35 deevrevldyifkelDkngdGvlsfeEfl 63 
                  ee+  +l +if+++D+ ++G + ++E+l
  MMETSP1325-20131115|1596_1  80 AEEKMALLKDIFDKFDTGQTGSVVRAEML 108
                 56666678888888888888877777775 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00031
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels......deevrevldyifkelDkn.gdGvlsfeEfl 63 
                 lk++F+++D+ ++g++ ++e+l  +    s l        +e+++     ++ lD   + G+++fe f+
  MMETSP1325-20131115|1596_1  87 LKDIFDKFDTGQTGSVVRAEMLVGFMEDKSILLssfpkhTSEIPQA----LELLDCGkKEGTITFEKFA 151
                 7899************999999888775544446664444444444....5555555445577776665 PP

>> PF01523.11  Putative modulator of DNA gyrase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.35     8e+02     250     265 ..       8      23 ..       4      33 .. 0.71
   2 ?   10.0   0.0   0.00015      0.34      72     118 ..      51      97 ..      40     122 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.35
  PF01523.11 250 vaselvtlvddptlpg 265
                 v+se +++ +d t+ +
  MMETSP1325-20131115|1596_1   8 VLSEEMSIFADQTHVK 23 
                 7788888888877644 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00015
  PF01523.11  72 eeekelpepapeppvklydpepadlkevdleekiellkeleaaalek 118
                  ++  +p+++p+p  ++ +++++++++ ++eek++llk++ +++   
  MMETSP1325-20131115|1596_1  51 RDPFVIPTLKPMPDDRPEEEKAKHIDARPAEEKMALLKDIFDKFDTG 97 
                 477889999999999999999********************999754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 741.51
//
Query:       MMETSP1325-20131115|1594_1  [L=435]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1861.46
//
Query:       MMETSP1325-20131115|1597_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-28   96.6  23.5      8e-08   31.7   0.0    8.2  9  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.025   12.9   0.0       0.23    9.8   0.0    2.1  2  PF04841.8  Vps16, N-terminal region
      0.095   12.4   0.0       0.78    9.4   0.0    2.2  2  PF04566.8  RNA polymerase Rpb2, domain 4


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.5    0.0015       6.7      12      36 ..       6      30 ..       4      30 .. 0.88
   2 ?   -1.7   0.0      0.64   2.9e+03      12      30 ..      49      67 ..      48      71 .. 0.80
   3 !   27.0   0.4   5.4e-10   2.5e-06       6      39 .]      85     118 ..      81     118 .. 0.94
   4 ?    3.0   0.1      0.02        91      15      37 ..     137     158 ..     132     160 .. 0.85
   5 !   25.8   0.0   1.3e-09     6e-06       8      38 ..     172     204 ..     169     205 .. 0.96
   6 ?    2.1   0.0     0.039   1.8e+02       6      35 ..     214     244 ..     209     248 .. 0.83
   7 ?   -1.1   0.0      0.41   1.9e+03      24      39 .]     276     291 ..     272     291 .. 0.87
   8 !    9.9   0.0   0.00013      0.61      15      38 ..     310     332 ..     306     333 .. 0.83
   9 !   31.7   0.0   1.8e-11     8e-08       8      39 .]     345     376 ..     339     376 .. 0.94

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0015
                SSEEEEEEESSSTEEEEEETTSEEE CS
  PF00400.27 12 spVtcvafspdgpllasgSrDgtir 36
                ++ +++ ++p+  ++++g+ Dgt+r
  MMETSP1325-20131115|1597_1  6 GGLRAIVVCPTTFVICCGGGDGTVR 30
                56689999999999**********8 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.64
                SSEEEEEEESSSTEEEEEE CS
  PF00400.27 12 spVtcvafspdgpllasgS 30
                ++Vt+++   +g+ ++ g 
  MMETSP1325-20131115|1597_1 49 GAVTSMSMVSNGTEILVGT 67
                689****999988887775 PP

  == domain 3    score: 27.0 bits;  conditional E-value: 5.4e-10
                 EEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   6 tlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 +  gHt+ Vtcv+f   + ++as+S+ g i++Wd
  MMETSP1325-20131115|1597_1  85 VSVGHTAEVTCVCFGTRSDVFASASSEGAIKVWD 118
                 667******************************9 PP

  == domain 4    score: 3.0 bits;  conditional E-value: 0.02
                 EEEEEESSSTEEEEEETTSEEEE CS
  PF00400.27  15 tcvafspdgpllasgSrDgtirl 37 
                 +c+++  d + l+sg +D  +r 
  MMETSP1325-20131115|1597_1 137 RCMCWIGD-TALVSGWEDYFVRC 158
                 8*******.99999999988876 PP

  == domain 5    score: 25.8 bits;  conditional E-value: 1.3e-09
                 ESSSSSEEEEEEESS..STEEEEEETTSEEEEE CS
  PF00400.27   8 rgHtspVtcvafspd..gpllasgSrDgtirlW 38 
                  +H ++Vt+va + d   ++++sg++Dg++r+W
  MMETSP1325-20131115|1597_1 172 NAHRGAVTAVATHSDasLSYVLSGGEDGSVRIW 204
                 68******************************* PP

  == domain 6    score: 2.1 bits;  conditional E-value: 0.039
                 EEESSSSSEEEEEEESS.STEEEEEETTSEE CS
  PF00400.27   6 tlrgHtspVtcvafspd.gpllasgSrDgti 35 
                  + +H+++V+ v ++   ++l+ s++ D++ 
  MMETSP1325-20131115|1597_1 214 QFVEHKKSVSKVLVDVKsPNLVHSAGLDCSA 244
                 5778999999999999999999999999985 PP

  == domain 7    score: -1.1 bits;  conditional E-value: 0.41
                 TEEEEEETTSEEEEEE CS
  PF00400.27  24 pllasgSrDgtirlWd 39 
                 + l+++  +g +  Wd
  MMETSP1325-20131115|1597_1 276 QELVTCDMNGRLLFWD 291
                 5699********99*8 PP

  == domain 8    score: 9.9 bits;  conditional E-value: 0.00013
                 EEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  15 tcvafspdgpllasgSrDgtirlW 38 
                 +cv++sp+g++la +++   + ++
  MMETSP1325-20131115|1597_1 310 RCVSVSPTGRYLAICGD-FLVNVF 332
                 8**************98.666555 PP

  == domain 9    score: 31.7 bits;  conditional E-value: 1.8e-11
                 ESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   8 rgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                  gH+ pV+++ +spd + l+s ++D++i++W+
  MMETSP1325-20131115|1597_1 345 LGHSEPVRDLYWSPDEKQLISVGDDCCICVWN 376
                 69*****************************7 PP

>> PF04841.8  Vps16, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   5.1e-05      0.23     197     283 ..      68     157 ..      25     174 .. 0.70
   2 ?    1.0   0.0     0.024   1.1e+02      63     110 ..     329     379 ..     277     381 .] 0.75

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 5.1e-05
   PF04841.8 197 avGeslkliteqsaka...vssnekvvkisvsdnrrhlalytetgkillisvdlskklleleldakdipkqiaWvgndaVvvsfesllvl 283
                   G   +++ ++ +++   v    +v+ +         a   + g i++   +    l e ++ a   +++++W+g  a v  +e++ v 
  MMETSP1325-20131115|1597_1  68 DSGRMYRMLVDDLSSQlvsVGHTAEVTCVCFGTRSDVFASASSEGAIKVWDLNNYSVLAETRVAAPGGARCMCWIGDTALVSGWEDYFVR 157
                 445555555555555532233333333333444455678888999999999999999****************************99875 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.024
   PF04841.8  63 iqiyslsG..rlLkkllwnkeklvklgwseee.eLivvqkagavlvygllG 110
                 +++++l G  +l+++ l ++e++  l ws +e +Li v ++  + v++++G
  MMETSP1325-20131115|1597_1 329 VNVFDLRGgtQLMAQGLGHSEPVRDLYWSPDEkQLISVGDDCCICVWNFYG 379
                 567777765567777455559999999997662699999999999999998 PP

>> PF04566.8  RNA polymerase Rpb2, domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00017      0.78      34      59 ..      52      77 ..      46      78 .. 0.86
   2 ?   -0.3   0.0      0.19   8.4e+02      15      28 ..     243     256 ..     237     282 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00017
                SEEEEETTTTEEEEE-----EEEEEE CS
   PF04566.8 34 vsvvrneeekeiristDaGRicRPLi 59
                +s+++ ++  ei + tD GR++R L+
  MMETSP1325-20131115|1597_1 52 TSMSMVSNGTEILVGTDSGRMYRMLV 77
                6788888999*************775 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.19
                 HHHHHHHHHHHH-- CS
   PF04566.8  15 eeLvetlRelRRkg 28 
                 + ++  lR+ RR +
  MMETSP1325-20131115|1597_1 243 SAFTYDLRKERRCV 256
                 568889*****976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.70
# Mc/sec: 1304.30
//
Query:       MMETSP1325-20131115|1598_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       499  (0.036498); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 1405.56
//
Query:       MMETSP1325-20131115|1600_1  [L=364]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-27   94.0   0.0    7.5e-27   93.4   0.0    1.3  1  PF02852.17 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
    1.5e-14   54.2   0.0    2.1e-13   50.5   0.0    3.2  1  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
    2.5e-13   50.1   0.0    6.1e-13   48.8   0.0    1.7  1  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
     0.0017   17.8   0.0     0.0029   17.1   0.0    1.3  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
     0.0024   17.8   0.0        1.5    8.6   0.0    2.3  2  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.059   12.6   0.0      0.092   11.9   0.0    1.3  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
      0.062   12.3   0.0      0.098   11.6   0.0    1.3  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
      0.082   12.8   0.0        0.2   11.6   0.0    1.6  1  PF13450.1  NAD(P)-binding Rossmann-like domain
       0.13   12.1   0.0       0.22   11.4   0.0    1.4  1  PF02254.13 TrkA-N domain
       0.13   12.4   0.0       0.23   11.6   0.0    1.4  1  PF13241.1  Putative NAD(P)-binding
       0.14   12.3   0.0       0.24   11.5   0.0    1.4  1  PF13478.1  XdhC Rossmann domain


Domain annotation for each model (and alignments):
>> PF02852.17  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.4   0.0   6.1e-30   7.5e-27       1     108 [.     224     331 ..     224     333 .. 0.98

  Alignments for each domain:
  == domain 1    score: 93.4 bits;  conditional E-value: 6.1e-30
                 BEEEEESSSEEEE----HHHHHHHT..EEEEEEEECCGHHTTTTT.CCEEEEEEEETTTTBB---EEEETTHHHHHHHHHHHHHCT-BHHHHHTSBSSSSSSGGGHHH CS
  PF02852.17   1 vpsvvftdpeiasvGlteeeAkkaggeikvgklpfkandralayaetkgfvKlvvdaetgkvlGahivGpgaseliqelavaikagltvedlantvfihPtlsealke 108
                 +p +++t+peia vGl e+e  ++g++++++k ++k++dr + ++ + gfvK+ + + t+++lGa+ivGp+a+++i+e++++++ ++ ++ la t++++Pt++ea+++
  MMETSP1325-20131115|1600_1 224 TPWCTYTEPEIAHVGLYEKEMDDRGIKYVTYKRDLKDVDRCKCEGVKAGFVKISALEGTDEILGATIVGPNAGDMISEITICMQHNIGLSSLAGTIHPYPTSAEAVRQ 331
                 599******************************************************************************************************987 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.0   1.7e-16   2.1e-13     113     198 ..       2     193 ..       1     195 [. 0.95

  Alignments for each domain:
  == domain 1    score: 50.5 bits;  conditional E-value: 1.7e-16
                 EEE----B----TGCCH.TEEEC.SSHHHHHHHHHHCSTTTEEEEE-.............................................................................................................-GGGC.HHSS--BESSSSBBE-TTSBCSSTTEEE---TCEE CS
                 xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................................................................................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9 113 lviAtGarprtlgipgv.evailargvedsdeilellekpkkvvvvG.............................................................................................................tklla.ekagveldprggivVdeylrtsvpgiyaiGDvaeg 198
                  ++AtGa++ ++++pg  +v        + +++++l+e+p ++ ++G                                                                                                             + +l+ e++gve+d r g+ +de ++t+ p+iya+GDva++
  MMETSP1325-20131115|1600_1   2 AMVATGASAAVPPVPGLrSVP-----HLTNNDFFNLEELPPRMCLIGagpigiemaqtmarfgsdvtifeiapqllpredpdaaeclreqledemaihysvkinnmeyvpcegapegractkgpwgtykvyvtladgtdevfeceavlnatgrvpnVCNLGlEAVGVEFDNRQGVHIDECFQTTNPNIYACGDVASP 193
                 689*************83243.....348899****************************************************************************************************************************777777********************************975 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   4.9e-16   6.1e-13       1      67 [.      38     103 ..      38     113 .. 0.91

  Alignments for each domain:
  == domain 1    score: 48.8 bits;  conditional E-value: 4.9e-16
                 EEEEE---HHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEETTEEEEEEE CS
  PF00070.22   1 rvvvvGGGyiGlElAaalaklgkkVtvierrdrllraldeeiakilqkklekngievllntkveeie 67 
                 r++ +G+G iG+E+A+++a++g++Vt++e +++ll+ +d+++a+ l+++le++ + +++  k++++e
  MMETSP1325-20131115|1600_1  38 RMCLIGAGPIGIEMAQTMARFGSDVTIFEIAPQLLPREDPDAAECLREQLEDE-MAIHYSVKINNME 103
                 5778**********************************************998.8888888887766 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   2.3e-06    0.0029       4      51 ..      41      88 ..      38     103 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 2.3e-06
                EE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHHHHHTTCH CS
  PF02737.13  4 VvGaGtmGagiAavfaragleVvlvdiseealekalerieksleklve 51
                 +GaG +G ++A+ +ar g +V++++i+++ l +    +++ l+++ e
  MMETSP1325-20131115|1600_1 41 LIGAGPIGIEMAQTMARFGSDVTIFEIAPQLLPREDPDAAECLREQLE 88
                69*************************888877776666665555544 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0012       1.5     158     197 ..      28      66 ..       1      72 [. 0.54
   2 !    7.0   0.0    0.0039       4.8      96     162 ..      90     179 ..      78     197 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0012
   PF13738.1 158 evlepedlkgkrvvVvGgghsAidallnLldlgqkltwit 197
                 ++++ e+l + r+  +G+g  +i++++ +++ g+++t++ 
  MMETSP1325-20131115|1600_1  28 DFFNLEEL-PPRMCLIGAGPIGIEMAQTMARFGSDVTIFE 66 
                 55666555.4444566666666666666666666666553 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0039
   PF13738.1  96 glkvrlstrvtevere...............gdrfevrv..tdg..revrakalvlatgavskpktlglpg......sadkeavhleevlep 162
                 ++ +++s +++++e+                 ++++v v   dg  + ++++a++ atg   +p++ +l         +++++vh++e ++ 
  MMETSP1325-20131115|1600_1  90 EMAIHYSVKINNMEYVpcegapegractkgpWGTYKVYVtlADGtdEVFECEAVLNATGR--VPNVCNLGLeavgveFDNRQGVHIDECFQT 179
                 34488888888888777778898888886552335555522455855666*********6..677766655557774334588998877654 PP

>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.4e-05     0.092       2      34 ..      38      70 ..      37      91 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 7.4e-05
                EEEEE------------TTT---EEE---S-HH CS
   PF03721.9  2 kiaviGlGYvGlptavvlaekghevvgvDinee 34
                + + iG+G +G+ +a ++a+ g +v++++i ++
  MMETSP1325-20131115|1600_1 38 RMCLIGAGPIGIEMAQTMARFGSDVTIFEIAPQ 70
                789*************************99765 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.8e-05     0.098      38      70 ..      38      70 ..      26     101 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.8e-05
                EEE-B-------HHHHHHHH---EEEE--SS-- CS
  PF02826.14 38 tvGiiGlGrIGqavakrlkafgmkvlaydrskk 70
                ++++iG+G IG ++a++++ fg +v++++  ++
  MMETSP1325-20131115|1600_1 38 RMCLIGAGPIGIEMAQTMARFGSDVTIFEIAPQ 70
                6789**********************9998876 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00016       0.2       2      30 ..      42      70 ..      41      71 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00016
   PF13450.1  2 vGaGlsGlvaAylLakagkdvlvlekrdr 30
                +GaG  G+ +A+ +a+ g dv+++e +++
  MMETSP1325-20131115|1600_1 42 IGAGPIGIEMAQTMARFGSDVTIFEIAPQ 70
                8************************9876 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018      0.22       2      43 ..      40      81 ..      39     105 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00018
                EEE---HHHHHHHCCCHH.--..EEEEES-HHHHHHHHH---E CS
  PF02254.13  2 iiiGlGrvGrslaeeLre.gekdvvvidkdeerveelreegle 43
                ++iG+G +G ++a+++ + g+ dv++ +  ++ + +   + +e
  MMETSP1325-20131115|1600_1 40 CLIGAGPIGIEMAQTMARfGS-DVTIFEIAPQLLPREDPDAAE 81
                689***************777.8******99887766555555 PP

>> PF13241.1  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00018      0.23       9      55 ..      38      88 ..      31     136 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00018
                EEEEE-------HHHHHHTT---EEEE..E-SS-..-TT-T.......... CS
   PF13241.1  9 kvlvvGgGevAarkvrklleagakvtv..vspei..keleelvklaeeefe 55
                +++++G+G+++ + +++++++g +vt+  ++p++  +e  +  ++ +e++e
  MMETSP1325-20131115|1600_1 38 RMCLIGAGPIGIEMAQTMARFGSDVTIfeIAPQLlpREDPDAAECLREQLE 88
                6899***********************777888766444455555555444 PP

>> PF13478.1  XdhC Rossmann domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00019      0.24       2      55 ..      40      94 ..      39     105 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00019
                EEE-----HHHHHHHHHH---EEEEEES-GGG-TT-SE.EES-HHHHHH.HS--- CS
   PF13478.1  2 lifGaghvaqalaklaaelgfrvtvvddreerfpaade.veklpaeeleealsld 55
                 ++Gag+++ ++a+ +a++g +vt+++  ++ +p++d    ++ +e+le++++++
  MMETSP1325-20131115|1600_1 40 CLIGAGPIGIEMAQTMARFGSDVTIFEIAPQLLPREDPdAAECLREQLEDEMAIH 94
                689****************************998554325555566666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.66u 0.35s 00:00:01.01 Elapsed: 00:00:00.64
# Mc/sec: 1362.93
//
Query:       MMETSP1325-20131115|1599_1  [L=428]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-11   42.4  24.3    9.5e-07   28.4   5.8    2.7  3  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1      0.65   8.9e+03      12      17 ..     121     125 ..     118     125 .. 0.75
   2 !   28.4   5.8     7e-11   9.5e-07       3      31 .]     193     222 ..     191     222 .. 0.87
   3 !   23.4   2.6   2.6e-09   3.5e-05       1      31 []     285     315 ..     285     315 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.65
                 ----EE CS
  PF00397.21  12 ddGrvY 17 
                 + Gr+Y
  MMETSP1325-20131115|1599_1 121 T-GRTY 125
                 4.9999 PP

  == domain 2    score: 28.4 bits;  conditional E-value: 7e-11
                 -S.EEE.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21   3 pg.Weersddd.dGrvYYyNheTgetqWekP 31 
                 p  W+e ++d+ +G++YY+N +T++t+W++P
  MMETSP1325-20131115|1599_1 193 PSwWKE-VPDPtSGQTYYWNSITNQTSWDRP 222
                 775666.877789*****************9 PP

  == domain 3    score: 23.4 bits;  conditional E-value: 2.6e-09
                 ---SEEE.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21   1 lppgWeersddd.dGrvYYyNheTgetqWekP 31 
                 lp gW ++ + + +G++YY + +T+e  W+kP
  MMETSP1325-20131115|1599_1 285 LPAGWSKHLH-PgSGQYYYTHDTTKERRWTKP 315
                 799**95554.446*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1168  (0.0854301); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.36s 00:00:01.14 Elapsed: 00:00:00.93
# Mc/sec: 1102.84
//
Query:       MMETSP1325-20131115|1603_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-08   32.8   0.0    9.8e-08   32.3   0.0    1.2  1  PF13640.1  2OG-Fe(II) oxygenase superfamily
     0.0048   17.0   0.0     0.0074   16.4   0.0    1.3  1  PF03171.15 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   1.4e-11   9.8e-08      12      99 ..      10      84 ..       3      85 .. 0.84

  Alignments for each domain:
  == domain 1    score: 32.3 bits;  conditional E-value: 1.4e-11
   PF13640.1 12 lspHvDnsesssrrltlllylndpeweeeGGelelypsdrsegvakevedeevvpkpgrlvlFksdrslHrvtpvgaqgrrlaitgwf 99
                l  H+D+       l++++ l+d++  +eGG+l l      ++ +++++       +gr+++F++  + Hrv+pv ++grr+++tg++
  MMETSP1325-20131115|1603_1 10 LLRHFDG-----VLLSFVVALCDED-TYEGGNLTLGHMM-PGATRQSFK-----VPQGRAIVFPGGLLQHRVEPV-TEGRRYMLTGFV 84
                5679998.....699*******666.9*******99765.555555555.....8899*****************.**********97 PP

>> PF03171.15  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.1e-06    0.0074      19      98 ..      10      85 ..       5      86 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.1e-06
                EEEEEESSSCEEEEEEE......T--EEEEEE-EE..SCECECTSTT.EEEEEEEEHHCCCE---GTT-EEEE----CSEEEEEEEEEE CS
  PF03171.15 19 lgpHtDnenriltillq......ddggglqfrked..kwidvppdpv.allvnfgdvllvltngryksvlHrvlpntrgeRislafflr 98
                l  H D    +l++++       ++gg+l + +     + +  + p+ + +v++g +l           +Hrv p+t+g R++l+ f++
  MMETSP1325-20131115|1603_1 10 LLRHFDG--VLLSFVVAlcdedtYEGGNLTLGHMMpgATRQSFKVPQgRAIVFPGGLL-----------QHRVEPVTEGRRYMLTGFVE 85
                5678888..7777777777898888999988866566666666666667777777755...........6****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 643.47
//
Query:       MMETSP1325-20131115|1601_1  [L=846]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-14   50.7   0.0    1.7e-13   49.9   0.0    1.3  1  PF09409.5  PUB domain
    3.2e-10   39.0  11.7    1.1e-05   24.6   1.2    2.9  2  PF02151.14 UvrB/uvrC motif
    6.6e-10   38.7   0.0    1.6e-07   31.1   0.0    2.8  3  PF00789.15 UBX domain
    3.1e-07   30.0   0.0    3.4e-06   26.7   0.0    2.5  3  PF11470.3  GLUT4 regulating protein TUG
     0.0028   18.0   0.1      0.067   13.6   0.0    3.0  3  PF08817.5  WXG100 protein secretion system (Wss), protein YukD


Domain annotation for each model (and alignments):
>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.0   6.4e-17   1.7e-13       6      84 ..     412     501 ..     409     503 .. 0.95

  Alignments for each domain:
  == domain 1    score: 49.9 bits;  conditional E-value: 6.4e-17
   PF09409.5   6 fkkaleiLlkllkNIlknPneekyRrirlsNktfkekilsvegavelLellGFkeeee..........eeflvlp.eqseesledlqkal 84 
                  k +l ++lk++ N++k P ++  R+irlsN++fke++   +g+v+ L++lGF+ ee+          e+f++l+  +++e++  l+ka+
  MMETSP1325-20131115|1601_1 412 AKVCLLTILKYIANLIKMPLDPRPRSIRLSNQAFKERVAGQSGGVDALKALGFVLEEKglphelardrEHFTFLTlGEQQEDEGLLRKAF 501
                 677999***************************************************9*************************9999987 PP

>> PF02151.14  UvrB/uvrC motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   1.2   3.9e-09   1.1e-05       6      33 ..     279     306 ..     275     309 .. 0.91
   2 !   18.9   1.9   2.5e-07   0.00067      10      34 ..     311     335 ..     305     337 .. 0.91

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 3.9e-09
  PF02151.14   6 eLeeemeeAaeeedFEkAAklRDqinal 33 
                 +L +e+ +A++ edFE+AA+++++i+ +
  MMETSP1325-20131115|1601_1 279 RLNSEKAAAVAVEDFERAAQIKNEIALV 306
                 799**********************865 PP

  == domain 2    score: 18.9 bits;  conditional E-value: 2.5e-07
  PF02151.14  10 emeeAaeeedFEkAAklRDqinale 34 
                 e+e+A+++edF +AA ++ qi+al+
  MMETSP1325-20131115|1601_1 311 EKEQAVAAEDFMRAAAIKSQIAALQ 335
                 9**********************98 PP

>> PF00789.15  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.4   3.9e+03      47      75 ..      54      78 ..      47      80 .. 0.76
   2 ?    4.2   0.0     0.015        40       8      30 ..     101     123 ..      97     128 .. 0.88
   3 !   31.1   0.0   5.9e-11   1.6e-07       7      78 ..     689     759 ..     686     761 .. 0.96

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.4
                EEEEESSSTEEETSCCSBCCCHSTSSSCE CS
  PF00789.15 47 FkLltsfPrrlltksdktlseagllpnst 75
                ++L   + r +++ s ktl +a ++pn +
  MMETSP1325-20131115|1601_1 54 YQL--KHKRSAIDLS-KTLAQA-GVPNNA 78
                666..6778899999.6****9.999876 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.015
                 EEEEEE----EEEEEEESSSBHH CS
  PF00789.15   8 rlqiRlpDGsrlvrrFkksdtve 30 
                 ++++ lpDGsr + + ++s+t++
  MMETSP1325-20131115|1601_1 101 QIALSLPDGSRVQGKTSSSTTLR 123
                 68899**********99999986 PP

  == domain 3    score: 31.1 bits;  conditional E-value: 5.9e-11
                 EEEEEEE----EEEEEEESSSBHHHHHHHHHHHHSGCCTSEEEEESSSTEEETSCCSBCCCHSTSSSCEEEE CS
  PF00789.15   7 crlqiRlpDGsrlvrrFkksdtvesvyeyvdshldekeepFkLltsfPrrlltksdktlseagllpnstlvl 78 
                 + l++ +pD ++ v  F +++ v +v ++v+  l +  ++ +L ts Pr  l ++d tl e+gl+p +++ +
  MMETSP1325-20131115|1601_1 689 TLLRLQFPDRTTVVAAFHPNENVAAVTDVVRGVLATPPKQLTLFTSPPRTVLNPAD-TLRELGLVPAAVVYV 759
                 67999**************************************************9.***********9987 PP

>> PF11470.3  GLUT4 regulating protein TUG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   1.2e-09   3.4e-06      22      65 .]      36      82 ..      14      82 .. 0.86
   2 ?   -0.3   0.0      0.35   9.5e+02       4      24 ..     107     127 ..     106     128 .. 0.87
   3 ?   -4.2   0.0         5   1.4e+04      38      48 ..     567     577 ..     567     580 .. 0.83

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 1.2e-09
   PF11470.3 22 Vleeackkfkldsn...eytLkhnnkpldlslpfRlanLpngakLeL 65
                 l+ a++ f+l +     y+Lkh++  +dls ++ +a+ pn+a  eL
  MMETSP1325-20131115|1601_1 36 ALSAAVSAFGLPGTaheHYQLKHKRSAIDLSKTLAQAGVPNNAEVEL 82
                57889999****99999***************************998 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.35
   PF11470.3   4 ynfrrvkvkvtpsttltqVle 24 
                 ++++rv+ k++ sttl   l+
  MMETSP1325-20131115|1601_1 107 PDGSRVQGKTSSSTTLRGMLD 127
                 57899***********98775 PP

  == domain 3    score: -4.2 bits;  conditional E-value: 5
   PF11470.3  38 tLkhnnkpldl 48 
                 +Lk+++ +ld 
  MMETSP1325-20131115|1601_1 567 QLKAQRSQLDG 577
                 79999999995 PP

>> PF08817.5  WXG100 protein secretion system (Wss), protein YukD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   2.5e-05     0.067       5      71 ..      12      75 ..      10      78 .. 0.85
   2 ?   -0.0   0.0      0.44   1.2e+03      46      70 ..     726     751 ..     700     758 .. 0.70
   3 ?   -2.1   0.0         2   5.5e+03      15      39 ..     757     781 ..     749     799 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.5e-05
   PF08817.5  5 Vtvlagd.grltdlaLpadlPvrelipalvrllnlpgadasgqgqyslapikgapLsldatLddagVv 71
                V++l++   +++ ++   + P+   + a v ++ lpg+  +   +y+l+  k + ++l++tL++agV 
  MMETSP1325-20131115|1601_1 12 VAILWQGqRKAVAVRGGYAAPAHSALSAAVSAFGLPGTAHE---HYQLK-HKRSAIDLSKTLAQAGVP 75
                889995534477777778899999999**********9966...9****.****************96 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 0.44
   PF08817.5  46 qgqyslapikga.pLsldatLddagV 70 
                   q++l + + + +L +++tL+++g 
  MMETSP1325-20131115|1601_1 726 PKQLTLFTSPPRtVLNPADTLRELGL 751
                 3467777644444*********9996 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 2
   PF08817.5  15 tdlaLpadlPvrelipalvrllnlp 39 
                 + + +pa  P  el+ a +r+l ++
  MMETSP1325-20131115|1601_1 757 VYVSVPAGTPTQELLSAEARVLLDE 781
                 5578899999999998888777644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (846 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       736  (0.0538327); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.37u 0.40s 00:00:01.77 Elapsed: 00:00:00.81
# Mc/sec: 2502.86
//
Query:       MMETSP1325-20131115|1605_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|1607_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|1606_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|1609_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0063   15.9   1.8      0.033   13.6   0.1    2.0  2  PF10828.3  Protein of unknown function (DUF2570)
  ------ inclusion threshold ------
      0.055   13.6   3.4       0.26   11.5   0.2    2.1  2  PF06005.7  Protein of unknown function (DUF904)
      0.068   13.3   0.5      0.068   13.3   0.4    1.7  2  PF10956.3  Protein of unknown function (DUF2756)
      0.079   12.6   6.4        1.7    8.3   0.4    2.2  2  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.081   13.0   0.0       0.15   12.2   0.0    1.4  1  PF13159.1  Domain of unknown function (DUF3994)
       0.13   11.7   0.6        4.2    6.7   0.0    2.0  2  PF04156.9  IncA protein
       0.19   11.3   3.4        4.4    6.9   0.2    2.1  2  PF07926.7  TPR/MLP1/MLP2-like protein
       0.34   10.0   3.1       0.99    8.5   0.1    2.0  2  PF11932.3  Protein of unknown function (DUF3450)
       0.42   10.9   8.8       0.49   10.7   0.6    2.1  2  PF13600.1  N-terminal domain of unknown function (DUF4140)
       0.46    9.8   7.7       0.61    9.4   1.2    2.1  2  PF04977.10 Septum formation initiator
        0.8    9.4   5.4        1.6    8.5   0.4    2.1  2  PF11559.3  Afadin- and alpha -actinin-Binding
        1.5    8.3   7.0        0.4   10.2   1.2    1.9  2  PF04889.7  Cwf15/Cwc15 cell cycle control protein
        1.5    8.6   5.8        3.7    7.3   0.7    2.1  2  PF13863.1  Domain of unknown function (DUF4200)
        1.7    7.4   7.9        4.6    5.9   1.5    2.0  2  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        1.9    8.2   4.7       0.63    9.7   0.7    1.9  2  PF12848.2  ABC transporter
        2.1    7.0   8.4         20    3.8   5.9    1.9  1  PF14362.1  Domain of unknown function (DUF4407)
        4.7    6.8   8.7         15    5.1   6.0    1.7  1  PF08614.6  Autophagy protein 16 (ATG16)
        4.8    7.5   7.4         14    6.0   0.4    2.5  2  PF04102.7  SlyX
        6.8    7.0   9.1        7.4    6.9   0.7    2.3  2  PF09278.6  MerR, DNA binding
        7.3    6.2   7.1        2.7    7.6   1.5    2.3  2  PF07544.8  RNA polymerase II transcription mediator complex subunit 9


Domain annotation for each model (and alignments):
>> PF10828.3  Protein of unknown function (DUF2570)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1      0.23   1.6e+02      25      42 ..      14      31 ..       4      52 .. 0.69
   2 !   13.6   0.1   4.8e-05     0.033      25      53 ..      89     117 ..      83     121 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.23
   PF10828.3 25 qkidsLkaenkaqaqtie 42
                q +d+L+a+ k+q + ++
  MMETSP1325-20131115|1609_1 14 QLVDELRAQLKKQGEQLH 31
                567777777777654443 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 4.8e-05
   PF10828.3  25 qkidsLkaenkaqaqtieqqekankrLse 53 
                  +id+L+ en+ q+++i +qek+ k L +
  MMETSP1325-20131115|1609_1  89 AEIDHLRRENRRQQELIDRQEKTIKGLRD 117
                 47********************9998865 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.17   1.2e+02      28      45 ..      21      38 ..       8      46 .. 0.60
   2 ?   11.5   0.2   0.00038      0.26      20      55 ..      84     119 ..      82     124 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.17
                HHHHHHHHHHHHHHHHHH CS
   PF06005.7 28 eeLkeeneqlkeeneeLe 45
                ++Lk++ eql+ +++ Le
  MMETSP1325-20131115|1609_1 21 AQLKKQGEQLHTARQHLE 38
                345555555555555555 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00038
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF06005.7  20 ialLqmeieeLkeeneqlkeeneeLeeenkklkeer 55 
                  a+Lq ei+ L++en  ++e  +  e+ +k l++e+
  MMETSP1325-20131115|1609_1  84 TAALQAEIDHLRRENRRQQELIDRQEKTIKGLRDEK 119
                 589***********9999987777778888787775 PP

>> PF10956.3  Protein of unknown function (DUF2756)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.4    0.0001     0.068      54     103 ..      19      71 ..       8      72 .. 0.72
   2 ?   -1.6   0.1       4.3     3e+03      62      71 ..      98     107 ..      86     120 .. 0.55

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.0001
   PF10956.3  54 lkqqlktqt...rlqqqhlqtql.nnnaqrvqqgqpgelnareqvlpntnGGml 103
                 l+ qlk+q    ++ +qhl++   ++   rv+ +qpg +  r q++p ++GG +
  MMETSP1325-20131115|1609_1  19 LRAQLKKQGeqlHTARQHLEATAsDAALARVTVAQPGAT-SRTQMMPTARGGGI 71 
                 56666665411156789999765167789********86.68899***999965 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 4.3
   PF10956.3  62 trlqqqhlqt 71 
                  r qq+ ++ 
  MMETSP1325-20131115|1609_1  98 NRRQQELIDR 107
                 3333333332 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.5    0.0053       3.6      23      59 ..       4      40 ..       2      48 .. 0.79
   2 ?    8.3   0.4    0.0025       1.7      11      41 ..      88     118 ..      81     122 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0053
   PF12329.3 23 kLskkelkhnntikkLrkknkelekeieelkkklekl 59
                 L +k +  n+ +++Lr+++k++ +++ ++ + le  
  MMETSP1325-20131115|1609_1  4 VLLSKGDTDNQLVDELRAQLKKQGEQLHTARQHLEAT 40
                5777788899999999999999999998888777765 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0025
   PF12329.3  11 deqIaqLmeEgekLskkelkhnntikkLrkk 41 
                 +++I+ L++E  + +   +++++tik Lr +
  MMETSP1325-20131115|1609_1  88 QAEIDHLRRENRRQQELIDRQEKTIKGLRDE 118
                 3444444444444444444444444444444 PP

>> PF13159.1  Domain of unknown function (DUF3994)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00022      0.15       1      75 [.      11      84 ..      11      90 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00022
   PF13159.1  1 tdkeiveksekllkegkeyWkkvfeklekevkgkktksstktkkgsvstsktkdldaktgidednvqvniskdGk 75
                td+++v++   +lk+  e+++++ ++le+ +++++ +  t ++ g  s ++++ + +  gi++   +  +s dG+
  MMETSP1325-20131115|1609_1 11 TDNQLVDELRAQLKKQGEQLHTARQHLEATASDAALARVTVAQPGATSRTQMMPTARGGGINSA-TTFGTSDDGT 84
                578999***************************999999**************99999999985.5566667776 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.046        32      88     117 ..      14      43 ..       5      67 .. 0.70
   2 ?    6.7   0.0    0.0062       4.2      91     126 ..      85     120 ..      70     125 .. 0.73

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.046
   PF04156.9  88 sqlseleeeleqleerlaeleseledleed 117
                 + ++el  +l +  e+l++  ++le+  +d
  MMETSP1325-20131115|1609_1  14 QLVDELRAQLKKQGEQLHTARQHLEATASD 43 
                 445566666666666666666666665554 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0062
   PF04156.9  91 seleeeleqleerlaeleseledleedlellqeelk 126
                 + l+ e+++l++++  +++ ++ +e+  + l+ e++
  MMETSP1325-20131115|1609_1  85 AALQAEIDHLRRENRRQQELIDRQEKTIKGLRDEKR 120
                 567777777777777777777777777777776555 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1     0.021        14      61      84 ..      16      39 ..       4      51 .. 0.49
   2 ?    6.9   0.2    0.0064       4.4       1      32 [.      87     118 ..      87     122 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.021
   PF07926.7 61 Ltklkkelaelqkeaselrkeads 84
                + +l+++l++  +++++ r+ +++
  MMETSP1325-20131115|1609_1 16 VDELRAQLKKQGEQLHTARQHLEA 39
                333333333333333333333333 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0064
   PF07926.7   1 leaeisslkeelkrlesqiaaieeqiqklkdD 32 
                 l+aei+ l+ e+ r ++ i ++e++i+ l+d+
  MMETSP1325-20131115|1609_1  87 LQAEIDHLRRENRRQQELIDRQEKTIKGLRDE 118
                 5799**********************999986 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2      0.11        74      64      92 ..      14      42 ..       3      63 .. 0.64
   2 ?    8.5   0.1    0.0014      0.99      61      92 ..      86     117 ..      79     121 .. 0.88

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.11
   PF11932.3 64 eevenlkvyndqleklvenqqqelaslqe 92
                + v++l+++ +++ +++++ +q l++ + 
  MMETSP1325-20131115|1609_1 14 QLVDELRAQLKKQGEQLHTARQHLEATAS 42
                44555666666666666666655555444 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0014
   PF11932.3  61 qlqeevenlkvyndqleklvenqqqelaslqe 92 
                 +lq+e++ l+  n+++++l++ q+++++ l +
  MMETSP1325-20131115|1609_1  86 ALQAEIDHLRRENRRQQELIDRQEKTIKGLRD 117
                 689999******************99998876 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   1.2     0.051        35      64      94 ..      12      42 ..       3      52 .. 0.54
   2 ?   10.7   0.6   0.00071      0.49      67     103 ..      79     115 ..      49     116 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.051
   PF13600.1 64 dadaaseelaeleaelraledelarleaeke 94
                d++  +e  a+l+++ ++l  ++++lea+++
  MMETSP1325-20131115|1609_1 12 DNQLVDELRAQLKKQGEQLHTARQHLEATAS 42
                3444444555555555555555555554444 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00071
   PF13600.1  67 aaseelaeleaelraledelarleaekealeariafl 103
                 ++++  a+l+ae++ l++e +r ++ ++  e++i+ l
  MMETSP1325-20131115|1609_1  79 TSDDGTAALQAEIDHLRRENRRQQELIDRQEKTIKGL 115
                 6778899***************************987 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.3     0.051        35      20      49 ..      14      43 ..       4      47 .. 0.78
   2 ?    9.4   1.2   0.00089      0.61      21      54 ..      86     118 ..      83     120 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.051
  PF04977.10 20 yqlkqeiaalqaelaklkaeneeLeaevkd 49
                + +++  a+l+++ ++l+  ++ Lea  +d
  MMETSP1325-20131115|1609_1 14 QLVDELRAQLKKQGEQLHTARQHLEATASD 43
                566777889999999999999999988766 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00089
  PF04977.10  21 qlkqeiaalqaelaklkaeneeLeaevkdLksde 54 
                 +l++ei+ l +e+ ++++ +++ e+ +k L+ de
  MMETSP1325-20131115|1609_1  86 ALQAEIDHLRRENRRQQELIDRQEKTIKGLR-DE 118
                 6899999999999999999999999999997.54 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.3     0.073        50      91     118 ..      18      45 ..       5      62 .. 0.56
   2 ?    8.5   0.4    0.0023       1.6      82     116 ..      84     118 ..      73     120 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.073
   PF11559.3  91 llqekerqlekklktleqklknekeelq 118
                  l ++ +++  +l t+ q+l +++ +++
  MMETSP1325-20131115|1609_1  18 ELRAQLKKQGEQLHTARQHLEATASDAA 45 
                 4444444444445555555555555544 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0023
   PF11559.3  82 leqlerelallqekerqlekklktleqklknekee 116
                  ++l+ e+++l ++ r ++  + ++e+++k +++e
  MMETSP1325-20131115|1609_1  84 TAALQAEIDHLRRENRRQQELIDRQEKTIKGLRDE 118
                 56778888888888888888888888888888876 PP

>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.2      0.31   2.1e+02      52     169 ..      12      35 ..       5      74 .. 0.56
   2 ?   10.2   1.2   0.00059       0.4     143     174 ..      79     110 ..      71     122 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.31
   PF04889.7  52 eelekrdlraeLleaEaaakakkekskkkralenakkeeeleaakeaeededeekeakrkkkleeareidaddsdkseeesdesdddsdddddeDetaeLlrELekiKkeraeekere 169
                 ++    +lra+L ++ ++ ++ +                                                                                              +
  MMETSP1325-20131115|1609_1  12 DNQLVDELRAQLKKQGEQLHTAR----------------------------------------------------------------------------------------------Q 35 
                 22334445555544433333333..............................................................................................2 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00059
   PF04889.7 143 ddeDetaeLlrELekiKkeraeekereeeeka 174
                 +++D ta+L++E++ +++e  +++e  +++++
  MMETSP1325-20131115|1609_1  79 TSDDGTAALQAEIDHLRRENRRQQELIDRQEK 110
                 689****************9888887777643 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.2     0.067        46      84     103 ..      21      40 ..      10      45 .. 0.68
   2 ?    7.3   0.7    0.0054       3.7      12      37 ..      87     112 ..      81     120 .. 0.62

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.067
   PF13863.1  84 kklkaqleelkaeiekleek 103
                 ++lk+q e+l++ +++le++
  MMETSP1325-20131115|1609_1  21 AQLKKQGEQLHTARQHLEAT 40 
                 57777777777777777776 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0054
   PF13863.1  12 vqlaldakreeierkeeelkereeel 37 
                 +q+++d+ r+e +r++e+++++e+ +
  MMETSP1325-20131115|1609_1  87 LQAEIDHLRRENRRQQELIDRQEKTI 112
                 45555555555555555555555555 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2     0.013       9.1     112     146 ..      14      48 ..       3      61 .. 0.54
   2 ?    5.9   1.5    0.0067       4.6      72     104 ..      84     116 ..      79     122 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.013
   PF10186.4 112 qlekrraeqlaklqeeikrtksklnslesltaekR 146
                 ql++++ +ql+k+ e+++ +++ l+++ s+ a +R
  MMETSP1325-20131115|1609_1  14 QLVDELRAQLKKQGEQLHTARQHLEATASDAALAR 48 
                 44444444444444444444444444444444444 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0067
   PF10186.4  72 ieqirkrieqlkeeieqkrerieelkealaqrr 104
                 ++ +++ i++l++e ++++e+i++++++++ +r
  MMETSP1325-20131115|1609_1  84 TAALQAEIDHLRRENRRQQELIDRQEKTIKGLR 116
                 678999999999999999999999999999887 PP

>> PF12848.2  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       1.3   9.1e+02      26      44 ..      20      38 ..      13      62 .. 0.61
   2 ?    9.7   0.7   0.00093      0.63      26      52 ..      91     117 ..      85     126 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 1.3
   PF12848.2 26 leqqekayekqqkeikkle 44
                ++q +k+ e+    +++le
  MMETSP1325-20131115|1609_1 20 RAQLKKQGEQLHTARQHLE 38
                4444444444444444444 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00093
   PF12848.2  26 leqqekayekqqkeikkleefIdrfra 52 
                  +  ++++++qq+ i ++e+ I+ +r 
  MMETSP1325-20131115|1609_1  91 IDHLRRENRRQQELIDRQEKTIKGLRD 117
                 5678999****************9997 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   5.9     0.029        20     131     166 ..      36     113 ..      10     133 .] 0.58

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.029
   PF14362.1 131 a..........................................slsaklaaltaeiaalqaeldeaqaevnaaeeevq 166
                                                            + ++  aal+aei+ l++e++ +q+ ++++e++ +
  MMETSP1325-20131115|1609_1  36 HleatasdaalarvtvaqpgatsrtqmmptarggginsattfgTSDDGTAALQAEIDHLRRENRRQQELIDRQEKTIK 113
                 133334444455555566666666666666667777777777677777788888888888888888888888777654 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   6.0     0.023        15      27     131 ..      13     118 ..       6     122 .. 0.66

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.023
   PF08614.6  27 rkLadrtr.llkaenealqaekkevqssassstsasgsgsdaaiaeleqklaklreelaelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleee 131
                 ++L d+ r +lk++ e+l ++ ++++ +as ++ a+ ++ +    +  q++   r    ++  + g        l+ e+  +r+e++++++ +++++++ik l++e
  MMETSP1325-20131115|1609_1  13 NQLVDELRaQLKKQGEQLHTARQHLEATASDAALARVTVAQPGATSRTQMMPTARGGGINSATTFGTSDDGTAALQAEIDHLRRENRRQQELIDRQEKTIKGLRDE 118
                 5666665414566666677767777777777777777777777777777777777777777777777777777777777777777777777777777777666655 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.4     0.021        14      32      57 ..      14      38 ..      10      54 .. 0.54
   2 ?    4.6   0.9     0.054        37      20      46 ..      91     117 ..      83     127 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.021
   PF04102.7 32 keidrlqrqlrllaerlkeleessne 57
                + +d+l++ql+   e+l+ ++ +  e
  MMETSP1325-20131115|1609_1 14 QLVDELRAQLKKQGEQLHTAR-QHLE 38
                444555555555555555544.2222 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.054
   PF04102.7  20 ieeLNevvaeqqkeidrlqrqlrllae 46 
                 i++L ++  +qq+ idr+++ ++ l++
  MMETSP1325-20131115|1609_1  91 IDHLRRENRRQQELIDRQEKTIKGLRD 117
                 555556666788888888888877766 PP

>> PF09278.6  MerR, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.7     0.011       7.4      38      64 ..      13      39 ..       6      40 .. 0.88
   2 ?    4.4   1.1     0.064        44      32      61 ..      89     118 ..      79     121 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.011
                HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF09278.6 38 rallaeklaeleeqiaeLqalraeLea 64
                ++l++e +a+l +q ++L   r++Lea
  MMETSP1325-20131115|1609_1 13 NQLVDELRAQLKKQGEQLHTARQHLEA 39
                4899*********************96 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.064
                 -BHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF09278.6  32 rpcadvrallaeklaeleeqiaeLqalrae 61 
                 ++ +++r+  +++ + +++q ++++ lr+e
  MMETSP1325-20131115|1609_1  89 AEIDHLRRENRRQQELIDRQEKTIKGLRDE 118
                 456777788889999999999999999987 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.67   4.6e+02      63      76 ..      18      31 ..      11      42 .. 0.50
   2 ?    7.6   1.5    0.0039       2.7      55      77 ..      85     107 ..      81     113 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.67
   PF07544.8 63 eleeqiarkrevLk 76
                el+ q++++ e L 
  MMETSP1325-20131115|1609_1 18 ELRAQLKKQGEQLH 31
                33333333333332 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0039
   PF07544.8  55 eeqeaeIeeleeqiarkrevLkk 77 
                 +  +aeI +l+ +++r++e++++
  MMETSP1325-20131115|1609_1  85 AALQAEIDHLRRENRRQQELIDR 107
                 5679****************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       837  (0.06122); expected 273.4 (0.02)
Passed bias filter:                      616  (0.0450556); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.54
# Mc/sec: 590.21
//
Query:       MMETSP1325-20131115|1610_1  [L=281]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.72    9.7   4.5        7.3    6.5   0.1    2.5  2  PF11169.3 Protein of unknown function (DUF2956)
        2.1    7.9  19.0        1.8    8.1  12.5    1.5  1  PF08648.7 Protein of unknown function (DUF1777)


Domain annotation for each model (and alignments):
>> PF11169.3  Protein of unknown function (DUF2956)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.5    0.0049        34      38      60 ..      69      91 ..      51     101 .. 0.82
   2 ?    6.5   0.1    0.0011       7.3      54      93 ..     215     251 ..     211     257 .. 0.70

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0049
   PF11169.3 38 eykkqqkakaReadkarkkqlka 60
                +yk++   + R++d+ r k + +
  MMETSP1325-20131115|1610_1 69 NYKRRDNGRDRDRDRDRDKPNGE 91
                69999999999999988876655 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0011
   PF11169.3  54 rkkqlkakqkeaeeeeeeeeeeeeekskssklpWvLLvls 93 
                 rk ++k+k++    ++++ e  e+ + +++++pW++L  s
  MMETSP1325-20131115|1610_1 215 RKGKTKTKTE---PSKHQPEGLEQAEYQHHAMPWIMLSTS 251
                 3333444433...45666677778889999******9877 PP

>> PF08648.7  Protein of unknown function (DUF1777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  12.5   0.00026       1.8      15      69 ..      52     105 ..      44     218 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00026
   PF08648.7  15 eRseerkrrrgrsrdRdrreRereRsrsreRdrarrrsRsrderrsrrsrSprr....l 69 
                 +R ++rk++r+rs dR  +   ++R++ r+Rdr   r+R++ + +s+rs  p++    +
  MMETSP1325-20131115|1610_1  52 DRFTHRKKSRSRSPDRP-N--YKRRDNGRDRDR--DRDRDKPNGESSRSPPPSDrftgG 105
                 67777777777777776.2..233333333333..446677777777777777644442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.72
# Mc/sec: 935.24
//
Query:       MMETSP1325-20131115|1613_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|1612_1  [L=349]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.33s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1608.32
//
Query:       MMETSP1325-20131115|1620_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        81  (0.00592452); expected 273.4 (0.02)
Passed bias filter:                       75  (0.00548566); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 229.44
//
Query:       MMETSP1325-20131115|1617_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|1622_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|1621_1  [L=394]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       599  (0.0438122); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.72
# Mc/sec: 1311.34
//
Query:       MMETSP1325-20131115|1624_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   15.1   0.0      0.046   14.1   0.0    1.6  1  PF13640.1 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   3.3e-06     0.046       6      86 ..      12     114 ..       7     122 .] 0.59

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.3e-06
   PF13640.1   6 ygpggfls.pHvDnsesssrrltlllylndpeweeeGGelelypsdr..........................segvakevedeevvpkpgrlvlFks.drslHrvtpv 86 
                 y+ g++    H+D+      ++tl + l+dp+ e+eGG +++   d+                           +g ++++  ++  p++    +F +  +++Hr   +
  MMETSP1325-20131115|1624_1  12 YNTGHRGVcLHTDS-----ADVTLNVALSDPS-EFEGGGTYFEAIDQtvclqqgealihkgelkhrgvditagGAGDPGVLLVCSETPQKTGGSFFMHaPELIHRGFTT 114
                 44444433589998.....68888888****9.8******998665347777666666666665555555544333333333222226665555555556666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 541.40
//
Query:       MMETSP1325-20131115|1626_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 530.96
//
Query:       MMETSP1325-20131115|1627_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|1619_1  [L=470]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-23   81.1   0.0    6.4e-23   80.6   0.0    1.2  1  PF00782.15 Dual specificity phosphatase, catalytic domain
    4.5e-17   62.6   4.0    1.3e-16   61.1   0.0    2.5  2  PF13472.1  GDSL-like Lipase/Acylhydrolase family
    7.3e-06   25.8   0.0    1.7e-05   24.6   0.0    1.6  1  PF00657.17 GDSL-like Lipase/Acylhydrolase
  ------ inclusion threshold ------
      0.045   12.9   0.0      0.064   12.4   0.0    1.1  1  PF00102.22 Protein-tyrosine phosphatase


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.6   0.0   1.9e-26   6.4e-23       1     132 [.     307     447 ..     307     448 .. 0.92

  Alignments for each domain:
  == domain 1    score: 80.6 bits;  conditional E-value: 1.9e-26
                 EEE--CTCHC.HHHHHH----EEEETTSSSSEE...ECCTT---EEEE-----....STT--CGGGHHHHHHHHHHH.CC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-STTHHHHHHHHH CS
  PF00782.15   1 lylgskstas.lalleklgitlvinvtkevpkn...nadkkseieylripved....etetkiskeleeavefieka.eqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnagflrqLleyer 132
                 +ylg+ + a+  a l  lg t+v+n++ +  ++      + +  eyl++ ++d    ++ + + + +e++ +f+eka e+    v+VHC+ G+sRSa++++++l+++++l+l  A++ vke r+ i pna f++ Ll++er
  MMETSP1325-20131115|1619_1 307 VYLGNRKVAEdAASLRLLGCTHVVNAAPSQVASalaANEEAGGPEYLHLDLDDrveaFDAAGTRAAFEKSAAFLEKAmESTSSVVYVHCAGGVSRSASVVLYWLITRRGLRLCAAWRTVKEAREVIGPNAAFMGLLLDAER 447
                 7**************************988877888555788899999999999999999***************99466677889**************************************************99887 PP

>> PF13472.1  GDSL-like Lipase/Acylhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.1   0.0   3.7e-20   1.3e-16       1     177 [.       2     187 ..       2     189 .. 0.74
   2 ?    1.4   0.8     0.078   2.7e+02     124     153 ..     240     271 ..     217     287 .. 0.70

  Alignments for each domain:
  == domain 1    score: 61.1 bits;  conditional E-value: 3.7e-20
   PF13472.1   1 valGDSitaGygap..sgegyadrlaaqlgagvevvnlgcsGattrdglarlea..........dvlallaadpdlvtltlGgNDlgfgdrtdaslekyeanlaaildalreaa..pvllvgyppvlpadrepp.aaglrdaldalnealaeaAaay..gvt..yvdlaaafadhegwdkdllapdglHPnaaGya 177
                 +++GDS+taG+     s e+ya++l+    agv+ v++g+sG++ + +    ++          +++ + +++ d+v++++G+NDlg+    + s++++ +n+ ++ + +r+ +  + l vg+p  + a +  p ++ +r++ + +++  +e+ +++  g t  y+d   +f +++    +++ +dglH    Gy+
  MMETSP1325-20131115|1619_1   2 LCYGDSLTAGWYNGgrSFEPYARHLNI---AGVSAVEVGLSGWCASEMVSSHDEpmlgiqhllsTAQ-ANGQPFDAVVIMAGTNDLGSL--QNSSPAAISSNVCQLHALARKGGvrRTLAVGIPESRFASGGRPfDEKRRATNALIEANAKEVSDSAelGETmvYIDCPVLFGNET----GHWESDGLHMAKLGYQ 187
                 79********86442266999999987...6****************75544444444443443222.378888**************6..6699*************999999**********7777776666455555555555666677765444565511555555565544....57889*********98 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.078
   PF13472.1 124 lrdaldalnealaeaAa.aygvtyvdlaaa.f 153
                  + ++da ++a a+aAa +++v+ vdl ++ f
  MMETSP1325-20131115|1619_1 240 TEPKADAADAAAAAAAAgDAHVPAVDLEKLgF 271
                 45566666666666554399******998752 PP

>> PF00657.17  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   4.9e-09   1.7e-05       5     232 ..       5     191 ..       2     193 .. 0.70

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 4.9e-09
                 --CCCHT--S-CCCSHHHHHHHHCCSCCHHHHHCTTEEEEE-------HH......HHHHHHHHHCCHHHHHHHHHH-ESEEEEE---TTT..ECE.SSSEEEHHHHHHHHHHHHHHHHTTTEEEEEEEEEECCHHH.......HHHTHCCHH......HHHHHHHHHHHHHHH.....H.HHHHCTEEEEEHHHHHHHCHHHGGGHHHTCCCSSTTSB-CCCHHHHHH CS
  PF00657.17   5 GDSltdgggdsngggwlaglanrltsalrlnarppgvdvfnrgisGrtsdgrlvqlesqalnllqelkllldkdskkspdlvtiqiGaNDllteslkntqnasvpevrdnlrslikrlylngarlivlltfvltnlpplgqlpsarskkvdakgclerlneavadfnellkklaeqlrkd.lvkeanvkyvDiysifqeldglqnpenssylfwDgfHptekghkavae 232
                 GDSlt+g    ngg+ ++  a +l        +  gv+ + +g sG ++  ++     + l++++ l++   ++   + d+v+i++G+NDl      + qn+s++ + +n  +l ++++ +g r     +++ ++ p        +s++  +   +++ +      n+l++  a++++ +    + + +y+D    f +   ++       + +Dg+H+   g++++++
  MMETSP1325-20131115|1619_1   5 GDSLTAG--WYNGGRSFEPYARHL--------NIAGVSAVEVGLSGWCASEMVSSHDEPMLGIQHLLSTA--QANGQPFDAVVIMAGTNDL-----GSLQNSSPAAISSNVCQLHALARKGGVR-----RTLAVGIP--------ESRFASGGRPFDEKR---RATNALIEANAKEVSDSaEL-GETMVYIDCPVLFGNE--TG------HWESDGLHMAKLGYQELGR 191
                 *******..999999999999999........6789************9988876666668788866666..999***************9.....6999*******************99999.....66666666........222222222222222...22222222222222222233.5566677775555554..33......3677777777777777665 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.9e-05     0.064     157     214 ..     378     429 ..     362     431 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHHSSTTSS-EEEES------HHHHHHHHHHHHHHHHT--TBEHHHHHHHHH CS
  PF00102.22 157 dlirkvrksktaksgpvvVhCsaGvgRtgtfvaldilleqleaeeekvdvlqivkelR 214
                  +++k+ +s+   s+ v VhC  Gv+R++++v+ +++ ++  +       + +vke R
  MMETSP1325-20131115|1619_1 378 AFLEKAMEST---SSVVYVHCAGGVSRSASVVLYWLITRRGLR--L-CAAWRTVKEAR 429
                 4555555555...899****************99998877666..3.55666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.36s 00:00:01.16 Elapsed: 00:00:00.55
# Mc/sec: 2047.80
//
Query:       MMETSP1325-20131115|1628_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 632.64
//
Query:       MMETSP1325-20131115|1629_1  [L=532]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   10.2   0.0       0.32    9.3   0.0    1.4  1  PF05918.6 Apoptosis inhibitory protein 5 (API5)


Domain annotation for each model (and alignments):
>> PF05918.6  Apoptosis inhibitory protein 5 (API5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   2.4e-05      0.32     482     551 ..     337     404 ..     265     409 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 2.4e-05
   PF05918.6 482 avqaksilekraanGkgknvaakksrvsndqkqlvnkssegiskvgasyrgrgrtrgrGrrsGGGrGrGr 551
                  v a   l+ r+ nG+g   +  ksr+ +  +  ++ + +  s+ + s +++  + g G+++GGG G+ +
  MMETSP1325-20131115|1629_1 337 EVYAVMRLKHRSPNGAGPTLTP-KSRTMD-SHLTSPCKIDHDSSSNLSPQSNASGGGGGGGGGGGGGGTY 404
                 4555566788899999998754.688877.7899999999999999998888888777777666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       622  (0.0454944); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.90u 0.34s 00:00:01.24 Elapsed: 00:00:00.54
# Mc/sec: 2360.86
//
Query:       MMETSP1325-20131115|1630_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 370.35
//
Query:       MMETSP1325-20131115|1631_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-13   49.0   0.1    3.6e-13   48.7   0.1    1.2  1  PF00627.26 UBA/TS-N domain
    0.00033   20.0   0.0     0.0004   19.7   0.0    1.2  1  PF09288.5  Fungal ubiquitin-associated domain
     0.0052   16.1   0.2      0.019   14.3   0.0    1.8  2  PF02845.11 CUE domain
     0.0091   15.4   0.8       0.01   15.2   0.0    1.4  2  PF02954.14 Bacterial regulatory protein, Fis family


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.1   1.1e-16   3.6e-13       2      37 .]      22      57 ..      21      57 .. 0.95

  Alignments for each domain:
  == domain 1    score: 48.7 bits;  conditional E-value: 1.1e-16
                THHHHHHHHH----HHHHHHHHHHTTTSHHHHHHHH CS
  PF00627.26  2 deeaiqqLreMGfsreeakkALratnnnvErAveyL 37
                 +eai+qL+ MGf+++++++AL++++nnv+ A++ L
  MMETSP1325-20131115|1631_1 22 PQEAIEQLMGMGFEEDRVVRALQEAGNNVQVAADRL 57
                589******************************987 PP

>> PF09288.5  Fungal ubiquitin-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.2e-07    0.0004      10      31 ..      23      44 ..      22      55 .. 0.93

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.2e-07
                HHHHHHHHH----HHHHHHHHH CS
   PF09288.5 10 rdlVdefvsqGFekdkvievLk 31
                +++++++  +GFe d+v+ +L+
  MMETSP1325-20131115|1631_1 23 QEAIEQLMGMGFEEDRVVRALQ 44
                799*****************97 PP

>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.21   7.1e+02       2      11 ..      23      32 ..      22      32 .. 0.73
   2 !   14.3   0.0   5.5e-06     0.019      16      41 ..      35      60 ..      33      60 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.21
                HHHHHHHHHH CS
  PF02845.11  2 eqmletLkem 11
                ++++e+L+ m
  MMETSP1325-20131115|1631_1 23 QEAIEQLMGM 32
                6788888766 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 5.5e-06
                -HHHHHHHHHHSTTTHHHHHHHHHHC CS
  PF02845.11 16 deevIravLrasngnvEaainaLLeg 41
                +e+ ++++L++ ++nv +a ++LL+g
  MMETSP1325-20131115|1631_1 35 EEDRVVRALQEAGNNVQVAADRLLSG 60
                6677899*****************87 PP

>> PF02954.14  Bacterial regulatory protein, Fis family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       1.6   5.4e+03       8      12 ..      24      28 ..      23      30 .. 0.49
   2 !   15.2   0.0     3e-06      0.01       5      28 ..      34      57 ..      32      58 .. 0.93

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 1.6
                HHHHH CS
  PF02954.14  8 elIea 12
                e+Ie+
  MMETSP1325-20131115|1631_1 24 EAIEQ 28
                44544 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 3e-06
                HHHHHHHHHHHT----HHHHHHH- CS
  PF02954.14  5 vEkelIeaALertgGnisrAArlL 28
                +E  + + AL+++g+n++ AA++L
  MMETSP1325-20131115|1631_1 34 FEEDRVVRALQEAGNNVQVAADRL 57
                6889999**************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 275.14
//
Query:       MMETSP1325-20131115|1632_1  [L=319]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-18   67.3   0.0    1.8e-18   66.5   0.0    1.4  1  PF02431.10 Chalcone-flavanone isomerase


Domain annotation for each model (and alignments):
>> PF02431.10  Chalcone-flavanone isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   0.0   1.3e-22   1.8e-18      12     199 ..      88     259 ..      69     262 .. 0.86

  Alignments for each domain:
  == domain 1    score: 66.5 bits;  conditional E-value: 1.3e-22
  PF02431.10  12 kelqLlGlGvRtvsflsvkvYaiGlYlaksdisklasklkgkaaaleleeseelfddlldeglekairivpvrntdfkhlrdglveailarlkkagkeesyeeeeeealeefkelf..ksrgsvpkgssllltrsakgslkvsfskegkkpeeelgevkdervsralllqyla..GkkpvSeeakksvaegl 199
                 +   L G+G R  +f +vk+Ya+GlY ++++  +              +++e+++++l+d+g+ k+i + +v+ ++ ++l d+l  + ++rl+ +g+         ++++ f+e++    +g+++ g++  +  +++g ++vs +k+g+++ +   +v+d+ v  al+++yl+  G ++vS+++k++v +++
  MMETSP1325-20131115|1632_1  88 DGAPLAGTGCRY-KFGFVKIYALGLYCDTEAAGAT------------SKDGEAVWAKLMDDGVAKTISLKIVYTLKPQQLIDALNDSFKPRLALPGR-------SDAGMKSFEEAMikLAEGTCESGDEYHFIYTPDGGFNVSAKKKGSNTLTDPIKVDDADVQFALFDTYLGanGIDAVSPSMKDDVLQRI 259
                 556799*****7.6****************33332............35899*****************************************9988.......56677777777655567899************************************************53344689********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1341.12
//
Query:       MMETSP1325-20131115|1634_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-51  171.1   0.0    9.8e-51  170.7   0.0    1.2  1  PF00179.21 Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.018   14.8   0.0      0.021   14.5   0.0    1.4  1  PF05773.17 RWD domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.7   0.0   1.4e-54   9.8e-51       1     139 [.     135     271 ..     135     272 .. 0.98

  Alignments for each domain:
  == domain 1    score: 170.7 bits;  conditional E-value: 1.4e-54
                 HHHHHHHHHHHS-TTCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-----B-HGGGSTTT--TT--HHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
  PF00179.21   1 rlqkelkelskkkpegikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvdetGeicldiLkeekWspaltlesvLlsiqsllaepnpesplnkeaakllkknreeykkkvkek 139
                 rl++++++l++++p+g++  ++++ n+l w++vi+gp++tp+egg+Fkl ++f e+YP+k+P+v+f tk+fHPn++++G+icldiL+++ Wsp ++++ +L+siqsll++pnp sp+n ea +l+++nr+ey+++v+e 
  MMETSP1325-20131115|1634_1 135 RLMRDFRRLQNDPPQGVTGAPMDN-NILVWQAVIFGPDDTPWEGGTFKLLLEFTEDYPNKAPSVRFLTKMFHPNIYNDGQICLDILQNQ-WSPIYDISAILTSIQSLLCDPNPASPANSEASRLYSENRREYNRRVREI 271
                 899********************7.**************************************************************87.*********************************************9875 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.1e-06     0.021      49     100 ..     129     230 ..      31     276 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.1e-06
                 x.................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx RF
  PF05773.17  49 p.................................................sleleirlpedYPeeaPiitlsstelsl..kelrkrleekleelaeenleGep 100
                                                                   +++l  +++edYP++aP +++ ++       ++ + + + l++++   +    
  MMETSP1325-20131115|1634_1 129 StaarrrlmrdfrrlqndppqgvtgapmdnnilvwqavifgpddtpweggTFKLLLEFTEDYPNKAPSVRFLTKMFHPniYNDGQICLDILQNQWSPIY-DIS 230
                 05555555555555555555666666666666666666666666666666899***************9988776665556666777777777776665.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.32s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1422.52
//
Query:       MMETSP1325-20131115|1637_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|1636_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-42  142.7   0.2    2.7e-42  142.4   0.2    1.1  1  PF03501.10 Plectin/S10 domain


Domain annotation for each model (and alignments):
>> PF03501.10  Plectin/S10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.4   0.2   1.9e-46   2.7e-42       1      93 [.      21     113 ..      21     116 .. 0.98

  Alignments for each domain:
  == domain 1    score: 142.4 bits;  conditional E-value: 1.9e-46
                 --HHHHHHHHHHHHH---EEE-S-----.-S-----HHHHHHHHHHHHH---EEEEE----EEEEE-----HHHHHH----TT---GGGS--- CS
  PF03501.10   1 ipkenrkaiyeylfkegvlvakkdfklpkheeldvpnlqvikllrslksrgyvkeqfaWrhyYylLtdeGieylreyLhlpaevvPatlkkke 93 
                 +pk+nr a+y+ lfkegvlvakkdf +pkh+++dvpn+qv++l++sl+srg+v+++f+W+++Y++L++eG++ylreyLhlp+++vPat+kkk+
  MMETSP1325-20131115|1636_1  21 VPKKNRIAVYSLLFKEGVLVAKKDFYKPKHDDVDVPNIQVMQLMKSLTSRGLVTQTFNWQYFYWYLNEEGVAYLREYLHLPEDIVPATHKKKA 113
                 79****************************************************************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 814.76
//
Query:       MMETSP1325-20131115|1639_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0019   18.2   0.3      0.045   13.7   0.0    2.6  3  PF13401.1  AAA domain
     0.0029   17.6   0.1      0.008   16.2   0.1    1.8  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
     0.0082   15.1   0.0      0.015   14.2   0.0    1.5  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
  ------ inclusion threshold ------
      0.011   16.4   0.5      0.099   13.3   0.1    2.3  2  PF13207.1  AAA domain
      0.014   15.0   1.6      0.029   13.9   0.3    2.2  2  PF13245.1  Part of AAA domain
      0.015   15.6   0.6       0.11   12.7   0.1    2.4  2  PF13191.1  AAA ATPase domain
      0.028   14.6   0.6       0.15   12.2   0.1    2.1  2  PF13238.1  AAA domain
      0.081   11.4   0.1       0.15   10.5   0.1    1.4  1  PF10412.4  Type IV secretion-system coupling protein DNA-binding domain
      0.092   12.2   0.0       0.15   11.5   0.0    1.4  1  PF00790.14 VHS domain
       0.11   12.3   0.2       0.56   10.0   0.0    2.1  2  PF13521.1  AAA domain


Domain annotation for each model (and alignments):
>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.15   2.1e+02      42      92 ..      67     120 ..      23     147 .. 0.75
   2 ?   -1.3   0.0       1.5     2e+03      46      68 ..     160     183 ..     117     200 .. 0.55
   3 !   13.7   0.0   3.3e-05     0.045       5      22 ..     213     230 ..     209     233 .] 0.88

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.15
   PF13401.1  42 fveapastspkellqkllsalglpakgrltteellealqealrrrrt....rlli 92 
                 f++ +++    +ll+k +++ g +++++lt+++l++ l  a++r+ +    ++l+
  MMETSP1325-20131115|1639_1  67 FMDYSNDE-VAQLLEKTVENRGFKLHAELTRDKLVDILKPAIARCPEdkagKVLV 120
                 44444544.7777888888888888889999999999999999998888875554 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 1.5
   PF13401.1  46 past.spkellqkllsalglpakg 68 
                 ++++ s  ++l++l + +gl+  +
  MMETSP1325-20131115|1639_1 160 NPGGdSLETVLRRLDGIIGLGGVK 183
                 222245555566666666665555 PP

  == domain 3    score: 13.7 bits;  conditional E-value: 3.3e-05
   PF13401.1   5 gilvvtGesGvGKTtllr 22 
                  ++v++G++G+GKTt++r
  MMETSP1325-20131115|1639_1 213 MHMVFSGNPGTGKTTVAR 230
                 689*************98 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   5.8e-06     0.008       1      18 [.     215     232 ..     215     233 .] 0.92

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 5.8e-06
                 EEEE-------HHHHHHH CS
  PF00004.24   1 vllyGppGtGKTllakav 18 
                 ++++G+pGtGKT++a+ v
  MMETSP1325-20131115|1639_1 215 MVFSGNPGTGKTTVARIV 232
                 689*************98 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   1.1e-05     0.015      47      70 ..     209     232 ..     173     233 .] 0.87

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.1e-05
   PF05496.7  47 eealdhvllyGpPGlGkttlakii 70 
                  +a  h++++G PG Gktt+a+i+
  MMETSP1325-20131115|1639_1 209 VNACMHMVFSGNPGTGKTTVARIV 232
                 56778*****************98 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.47   6.4e+02      50      64 ..      92     106 ..      52     172 .. 0.52
   2 ?   13.3   0.1   7.2e-05     0.099       4      18 ..     217     231 ..     215     233 .] 0.88

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.47
                 SSGGGB-HHHHHHHH CS
   PF13207.1  50 kdadadllaaildgl 64 
                  +   d+l +il++ 
  MMETSP1325-20131115|1639_1  92 AELTRDKLVDILKPA 106
                 222223333333333 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 7.2e-05
                 -B--TT---HHHHHH CS
   PF13207.1   4 itGppGsGKsTlake 18 
                 ++G pG+GK+T+a+ 
  MMETSP1325-20131115|1639_1 217 FSGNPGTGKTTVARI 231
                 68***********95 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.6   3.5e+03      31      49 ..      21      41 ..      16      45 .. 0.61
   2 ?   13.9   0.3   2.1e-05     0.029      13      31 ..     215     232 ..     198     233 .] 0.81

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 2.6
   PF13245.1 31 iaall.aarekp.grsvllva 49
                ia+++ + ++k+ +  vllva
  MMETSP1325-20131115|1639_1 21 IAHHFeDLEAKQiRDTVLLVA 41
                566664223345677788887 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 2.1e-05
   PF13245.1  13 lvvtGgPGtGKTttlaaii 31 
                 +v  G PGtGKT t+a+i+
  MMETSP1325-20131115|1639_1 215 MVFSGNPGTGKT-TVARIV 232
                 4448********.888876 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.25   3.4e+02      86     104 ..     131     169 ..      73     211 .. 0.50
   2 ?   12.7   0.1   8.3e-05      0.11      24      41 ..     208     230 ..     187     233 .] 0.75

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.25
   PF13191.1  86 laaelggwreallaalga....................l 104
                 +++++   +++ +a+l +                    +
  MMETSP1325-20131115|1639_1 131 QTDRVHLSNTVSKASLLSlteedfvepdanpggdsletV 169
                 444444444444444433333333333322222222222 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 8.3e-05
   PF13191.1  24 p.....lllvtGpsGiGKSsLlr 41 
                        ++++G++G+GK++++r
  MMETSP1325-20131115|1639_1 208 KvnacmHMVFSGNPGTGKTTVAR 230
                 144444699************98 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.54   7.3e+02      53      90 ..      96     132 ..      68     152 .. 0.60
   2 ?   12.2   0.1   0.00011      0.15       3      17 ..     217     231 ..     216     233 .] 0.89

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.54
   PF13238.1  53 edkldelldkleenes..elaegenviidghlaeleledl 90 
                 +dkl  +l+  +   +   +++ + v++d  + e   ++ 
  MMETSP1325-20131115|1639_1  96 RDKLVDILKPAI---ArcPEDKAGKVLVDKLVDEAIHRQT 132
                 333333333333...3332566777788888777744443 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 0.00011
   PF13238.1   3 itGtpGvGKtTlake 17 
                 ++G pG+GKtT+a++
  MMETSP1325-20131115|1639_1 217 FSGNPGTGKTTVARI 231
                 79***********97 PP

>> PF10412.4  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00011      0.15       3      33 ..     200     230 ..     198     232 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00011
   PF10412.4   3 tiagvplpkesetqhilivGttGtGKtqalr 33 
                 ++ag+p +k    +h++++G  GtGKt++ r
  MMETSP1325-20131115|1639_1 200 KLAGLPGSKVNACMHMVFSGNPGTGKTTVAR 230
                 6899999999*****************9875 PP

>> PF00790.14  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00011      0.15      65     121 ..      77     135 ..      71     154 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00011
                 HHHHHHHHH---HHHHHHTSHHHHHHHHHCC-TTT----S-..HHHHHHHHHHHHHHH- CS
  PF00790.14  65 klldalvkNcGskfhleiaskeflnelvklilekknsklak..vkkkvlelleeWadaf 121
                 +ll+  v+N G k+h e  + ++++ l+  i++ +++k  k  v k v e++   +d +
  MMETSP1325-20131115|1639_1  77 QLLEKTVENRGFKLHAELTRDKLVDILKPAIARCPEDKAGKvlVDKLVDEAIHRQTDRV 135
                 6899*****************************99999988778888888877666655 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.59   8.1e+02      18      49 ..      82     113 ..      71     141 .. 0.64
   2 ?   10.0   0.0   0.00041      0.56       2      17 ..     215     230 ..     214     233 .] 0.89

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.59
   PF13521.1  18 aLaargypvvpEvarevleeklakgeealpwe 49 
                  +++rg++ ++E +r+ l + l+     +p+ 
  MMETSP1325-20131115|1639_1  82 TVENRGFKLHAELTRDKLVDILKPAIARCPED 113
                 34566888888888888877777777777765 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00041
   PF13521.1   2 ivitGgpstGKTtlle 17 
                  v++G p+tGKTt+++
  MMETSP1325-20131115|1639_1 215 MVFSGNPGTGKTTVAR 230
                 69***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 1094.81
//
Query:       MMETSP1325-20131115|1640_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       530  (0.0387654); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.43s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 461.19
//
Query:       MMETSP1325-20131115|1633_1  [L=457]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-37  128.5   0.2    5.8e-37  126.6   0.0    1.8  2  PF00270.24 DEAD/DEAH box helicase
    3.2e-26   90.8   0.2      6e-26   90.0   0.1    1.5  1  PF00271.26 Helicase conserved C-terminal domain
    2.9e-05   23.6   0.4    7.3e-05   22.3   0.1    1.9  1  PF13245.1  Part of AAA domain
     0.0051   16.5   0.0     0.0085   15.8   0.0    1.4  1  PF04851.10 Type III restriction enzyme, res subunit
     0.0052   16.4   0.1      0.013   15.1   0.0    1.6  1  PF03511.9  Fanconi anaemia group A protein


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   0.0   2.1e-40   5.8e-37       2     168 ..     106     267 ..     105     272 .. 0.93
   2 ?   -0.8   0.0      0.29   7.9e+02      32     106 ..     308     378 ..     305     388 .. 0.66

  Alignments for each domain:
  == domain 1    score: 126.6 bits;  conditional E-value: 2.1e-40
                 HHHHHHHHHHHSS-EEEEEC-TT---HHHHHHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHHHTTTSS.EEEEETTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHHCCH.HTTTEEEEEECTHHHHHCTTTHHHHHHHHHHSHHTTTSEEEEEESS-TH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00270.24   2 piQaeaiplilgggdvlvaaeTGsGKTlaflipvlqilletlkkttikkalivaPtreLaeqtlnnlkkfkkypklrvlliiggvalardqlsvldngvdivvgTpgrlddlvstgkl.nlsqvrllVlDEadrllsqgfsdqlnqilqilcdgkrlqvivlSATlpk 168
                 +iQ++ai  + +g+d++++a+ G+GKT+ f + +lq++   l   ++ +ali+aPtreL+ q+ + l+ +k+y+ + + +++gg+  + d+ + l++g++ivvgTpgr++dl+ +++  +l +++++ lDEad++ls gf dq++ + + l  +++ qv ++SATlp 
  MMETSP1325-20131115|1633_1 106 AIQSRAIVPVARGRDIIAQAQSGTGKTATFTVGILQRIDPDL---HEVQALILAPTRELVTQIWTVLSAIKEYMPIHAHACVGGTRVR-DDIRALNDGAQIVVGTPGRIVDLITERRAlSLGHLKTFALDEADEMLSYGFIDQIKILFNYL--PEDTQVAIFSATLPL 267
                 69************************************8865...689*************************99***********77.999999888*****************6666*9*****************************9..7779*********93 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.29
                 HHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHHHTTTSS.EEEEETTSSBHHHHHHHHH....T..-SEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxx RF
  PF00270.24  32 lipvlqilletlkkttikkalivaPtreLaeqtlnnlkkfkkypklrvlliiggvalardqlsvl....dngvdivvgT 106
                  +p l  l+e     ti +a+i + tr  +e   + +     ++++ v +++++++++ +++ v+    ++  +++++T
  MMETSP1325-20131115|1633_1 308 KLPTLCDLYEA---VTITQAIIYCNTRRKVEWLTQAM----TEQDFTVSCLHSDMDMD-ERKIVMkefrSGSSRVLIAT 378
                 56667777763...46777777777776665554444....44456788888888877.44444446776667777776 PP

>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.1   2.2e-29     6e-26       3      78 .]     341     416 ..     339     416 .. 0.96

  Alignments for each domain:
  == domain 1    score: 90.0 bits;  conditional E-value: 2.2e-29
                 HHH----EEEE-TTS-HHHHHHHHHHHHTTTSSEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26   3 lekkgikvailhgelpqnereeileqfnagkskvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78 
                 ++++++ v +lh+++  +er+ ++++f++g+s+vl+at++++rGid+++v++Vinfdlp+ +++yi+riGR gR+g
  MMETSP1325-20131115|1633_1 341 MTEQDFTVSCLHSDMDMDERKIVMKEFRSGSSRVLIATDILARGIDVQQVSLVINFDLPTKRENYIHRIGRSGRFG 416
                 5678899*******************************************************************87 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   2.7e-08   7.3e-05       8      62 ..     116     169 ..     110     197 .. 0.81

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 2.7e-08
   PF13245.1   8 a.gnpllvvtGgPGtGKTttlaaiiaallaarekp.grsvllvaptgraakrlserl 62 
                 a g+ +++ ++  GtGKT+t + +i +++    +    + l++apt++ + ++  +l
  MMETSP1325-20131115|1633_1 116 ArGRDIIA-QAQSGTGKTATFTVGILQRI--DPDLhEVQALILAPTRELVTQIWTVL 169
                 34889999.********************..55777999************998888 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   3.1e-06    0.0085      24      67 ..     117     166 ..      68     198 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3.1e-06
  PF04851.10  24 ekkrglivmaTGtGKTlvaasliarlar......kflflvprkelleqal 67 
                 + + ++ ++  GtGKT + +  i++ +       ++l+l+p++el+ q  
  MMETSP1325-20131115|1633_1 117 RGRDIIAQAQSGTGKTATFTVGILQRIDpdlhevQALILAPTRELVTQIW 166
                 5577899999**********7555555566666**************975 PP

>> PF03511.9  Fanconi anaemia group A protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   4.7e-06     0.013      27      61 ..     313     346 ..     310     349 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 4.7e-06
   PF03511.9  27 aellkavdvCaevleClekrkvsWlvlfqltekdl 61 
                 ++l  av +  +++ C  +rkv Wl    +te+d 
  MMETSP1325-20131115|1633_1 313 CDLYEAVTITQAIIYCNTRRKVEWLTQ-AMTEQDF 346
                 58899*******************984.6888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.34s 00:00:01.12 Elapsed: 00:00:00.50
# Mc/sec: 2190.27
//
Query:       MMETSP1325-20131115|1638_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-18   64.8   3.7    5.4e-18   64.4   2.6    1.2  1  PF03134.14 TB2/DP1, HVA22 family
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.16   11.3   0.0    1.2  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF03134.14  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   2.6   7.8e-22   5.4e-18       3      94 .]      53     142 ..      51     142 .. 0.95

  Alignments for each domain:
  == domain 1    score: 64.4 bits;  conditional E-value: 7.8e-22
  PF03134.14   3 iiaqllsnlvgllyPayaslkaleskdkeddkqwltYWivyslltvvesladillswiPlYyelKllflvwlvlpktkGaeviykkvirpll 94 
                 +++++l  l +++  +++s+ka+esk+k+dd+++l++W+vy ++t+++ l+ +++ w+P++ ++K+lfl +++  ++kG+ +i k+v++pl+
  MMETSP1325-20131115|1638_1  53 VGMKMLLELSVYIPAVIKSIKAIESKEKDDDTELLSFWVVYCFFTICDPLIGMVFFWVPYFGLVKFLFLQYCY--RFKGTLLITKTVLKPLY 142
                 67889999999************************************************************98..68************985 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.4e-05      0.16      43      80 ..      41      78 ..      29      88 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.4e-05
   PF04156.9 43 ivliAlgvvLlalgllllllkapvqseedekieesrlq 80
                ++ +Al+++L+a+g+++ll+++   + + ++i + +++
  MMETSP1325-20131115|1638_1 41 GIFVALMFALFAVGMKMLLELSVYIPAVIKSIKAIESK 78
                56789***************999998888887774333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       685  (0.0501024); expected 273.4 (0.02)
Passed bias filter:                      433  (0.0316706); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 676.87
//
Query:       MMETSP1325-20131115|1641_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-44  150.7   0.3    1.9e-44  150.4   0.2    1.1  1  PF02910.15 Fumarate reductase flavoprotein C-term


Domain annotation for each model (and alignments):
>> PF02910.15  Fumarate reductase flavoprotein C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.4   0.2   1.4e-48   1.9e-44       1     129 []      71     206 .]      71     206 .] 0.98

  Alignments for each domain:
  == domain 1    score: 150.4 bits;  conditional E-value: 1.4e-48
                 HHHHHHHHHHH----B---HHHHHHHHHHHHHHHHTT-------SSS-HHHHHHHHHHHHHHHHHHHH----S--S------BTTS-SEETTT-SEEEEEE--STT.S-EEEEEE--GGG-......SS-S----- CS
  PF02910.15   1 rkeLqeiMqenagvfRteesLeealkkiaelkerlkkvkvkdkskvlntdlvealelenllelAeaiitaAlaRkESRGaHareDyperdDenwlkhtlaeldeee.kvkleyepvvittl......kippkersy 129
                 r e+q+ Mq+na+v+Rt+e L+e+ ++i+++++++ +v v+d+s ++ntdl+e+lel+nll +A +++++A  RkESRGaHa eD+p+rdDenw+kht+ ++ ee+ + ++ey+pv+  tl      ++pp +r+y
  MMETSP1325-20131115|1641_1  71 RTEMQKGMQANAAVYRTNEVLQEGADMIDAVNDKFPDVGVTDRSLIWNTDLIETLELRNLLACASTTMHGANLRKESRGAHALEDHPDRDDENWMKHTMGYFSEETrRSTIEYRPVHYYTLdeeeckTVPPVARVY 206
                 689*****************************************************************************************************9966****************99999**99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1050.32
//
Query:       MMETSP1325-20131115|1642_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.52
# Mc/sec: 1147.49
//
Query:       MMETSP1325-20131115|1644_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|1646_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 432.28
//
Query:       MMETSP1325-20131115|1647_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.33s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1138.27
//
Query:       MMETSP1325-20131115|1649_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   14.1   2.2      0.031   13.6   1.3    1.4  1  PF04193.9 PQ loop repeat


Domain annotation for each model (and alignments):
>> PF04193.9  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.3   2.3e-06     0.031      25      49 ..      13      37 ..       9      40 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.3e-06
   PF04193.9 25 ykrkSteGlSilflllwllGdilyl 49
                +  +St+GlS+++ +l ++++i+++
  MMETSP1325-20131115|1649_1 13 WSMRSTTGLSFTSTALSIIAFICST 37
                7789*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|1650_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 428.29
//
Query:       MMETSP1325-20131115|1651_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 809.97
//
Query:       MMETSP1325-20131115|1652_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 723.80
//
Query:       MMETSP1325-20131115|1648_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-09   35.8   0.0    7.4e-05   22.4   0.0    2.5  2  PF00334.14 Nucleoside diphosphate kinase


Domain annotation for each model (and alignments):
>> PF00334.14  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   1.9e-05      0.27       2      33 ..      30      61 ..      29      87 .. 0.89
   2 !   22.4   0.0   5.4e-09   7.4e-05      84     130 ..     228     285 ..     193     289 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.9e-05
                -EEEEE-HHHHCTT-HHHHHHHHHH---EEEE CS
  PF00334.14  2 rtlvliKPdavkrgligeiisrleekglkiva 33
                 +lv iKP+av++ +   + s+l ++g+ki+a
  MMETSP1325-20131115|1648_1 30 TALVFIKPHAVNEAVKSFVSSELTAQGMKIIA 61
                579***************************97 PP

  == domain 2    score: 22.4 bits;  conditional E-value: 5.4e-09
                 HHH----STTCS------------G...........GG-SEEE--SHHHHHHHHHHHS CS
  PF00334.14  84 rellGatnpaeaapgtiRgdfavsl...........geNlvHgSdseesaereiklfF 130
                  e++G+tnp++a +g+iRg+   ++           geN+vH+S+ + +  +e  +++
  MMETSP1325-20131115|1648_1 228 TEIIGPTNPENAPAGSIRGKGKAQWealgmssepnvGENVVHASAGPLEGLKERMVWL 285
                 3799**************99888888899998988888*******9999888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.51
# Mc/sec: 1809.01
//
Query:       MMETSP1325-20131115|1654_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0058   16.2   2.4     0.0076   15.8   1.7    1.1  1  PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
  ------ inclusion threshold ------
      0.095   12.0   0.1       0.11   11.7   0.1    1.1  1  PF06351.6  Allene oxide cyclase
       0.39   10.2   3.2        1.3    8.5   2.3    1.7  1  PF00822.15 PMP-22/EMP/MP20/Claudin family
        1.1    8.8   4.0       0.29   10.7   0.8    1.5  2  PF02687.16 FtsX-like permease family


Domain annotation for each model (and alignments):
>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.7   2.2e-06    0.0076      81     167 ..       2      95 ..       1      96 [. 0.73

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.2e-06
   PF13903.1  81 lillaavlallaslkksk.tlllltgvllllagilillavvlyvqkvq.......leikrnvqtwqselqnnvlaslgwSfylvvvgivlvllag 167
                 + ++a+ ++l++ l  +   l ++ g l ll+gi++l++v  +++ +        +  + +v++  + +q   + s+g  f ++++++++++ ++
  MMETSP1325-20131115|1654_1   2 FTAIALGFGLSGMLAMRVpKLAHNQGWLALLGGICGLAGVFSFAGLFPirracvpNFYTTYVNGTKQKEQAD-TCSYGGGFNCAWFASLFLFMSA 95 
                 456666666666666555567777777888888888888888887777555555555777888888777666.9****************99886 PP

>> PF06351.6  Allene oxide cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   3.3e-05      0.11      83     145 ..       7      70 ..       2      78 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.3e-05
   PF06351.6  83 fyfGdyGhisvqGayltyedtylavtGGsGifeGvyGqvklqqlvf.pfklfytfylkGikdlp 145
                 + fG  G ++++ + l++++ +la+ GG   ++Gv   + l  +    +  fyt y++G k+  
  MMETSP1325-20131115|1654_1   7 LGFGLSGMLAMRVPKLAHNQGWLALLGGICGLAGVFSFAGLFPIRRaCVPNFYTTYVNGTKQKE 70 
                 569999**********************99999998888776664314557********99755 PP

>> PF00822.15  PMP-22/EMP/MP20/Claudin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.3   0.00038       1.3      90     162 ..       9      94 ..       1      96 [. 0.58

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00038
  PF00822.15  90 vavlqlkclkkgerfkl.............aGiiflvsgLcvlvgas..iYtsriaedlskslskkqkysfGysfilgwvafllalls 162
                 + + +++ ++  +                 aG++ +++ + +  ++    Yt    + ++k++   +  s+G  f  +w a l+ ++s
  MMETSP1325-20131115|1654_1   9 FGLSGMLAMRVPKLAHNqgwlallggicglAGVFSFAGLFPIRRACVpnFYTTYVNGTKQKEQ--ADTCSYGGGFNCAWFASLFLFMS 94 
                 444444444444433333334455444444555444444444445533367777777777666..8999****************997 PP

>> PF02687.16  FtsX-like permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.8   8.6e-05      0.29      62     116 ..       4      53 ..       1      55 [. 0.80
   2 ?   -2.8   0.1       1.3   4.5e+03      73      75 ..      87      89 ..      76      96 .. 0.47

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 8.6e-05
  PF02687.16  62 Glllglllaqllsqallkfnssslpisldpitlllilllilllallaallparri 116
                 ++ lg+ l+ +l      + + +l  +  +  ll +++++ +++++a+l+p+rr+
  MMETSP1325-20131115|1654_1   4 AIALGFGLSGMLA-----MRVPKLAHNQGWLALLGGICGLAGVFSFAGLFPIRRA 53 
                 3444444444444.....778999999**************************98 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 1.3
  PF02687.16 73 lsq 75
                +s 
  MMETSP1325-20131115|1654_1 87 ASL 89
                221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 484.26
//
Query:       MMETSP1325-20131115|1645_1  [L=644]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-17   63.1   1.2    2.7e-17   63.1   0.8    3.6  3  PF01145.20 SPFH domain / Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.8     2e-21   2.7e-17       2     143 ..     136     354 ..     135     362 .. 0.85
   2 !    8.0   0.6   0.00016       2.1     141     177 ..     425     465 ..     421     469 .. 0.78
   3 ?  -12.7  10.5         1   1.4e+04     140     176 ..     530     569 ..     463     572 .. 0.46

  Alignments for each domain:
  == domain 1    score: 63.1 bits;  conditional E-value: 2e-21
  PF01145.20   2 tvepgevgvvvr..fGkvkrvlepGlhfklPfgekvtvvstrvqtldvsde................svtvptkDglnvtvdvtvryrv.sdakkliaavaqeeenlenllrrllesalrevl....sqmtldeilsnr.selaaelkneln.......................................................eqlqkygievvdvr 143
                 ++e+g  +vv+    G+++  +epGlh++ Pf+++v+ + +  ++++++d+                +v+v+++D++   ++v++r++  + + ++i+   +e++   nl+ +ll  ++r+v+    +q+t +e++++  ++++++l ++ln                                                       + l++y+iev++v 
  MMETSP1325-20131115|1645_1 136 MTEAGVNYVVTDqiSGTLRVYTEPGLHYRTPFFSTVAQYKQI-ISTTFEDSedrghsnmftqgpnqdAVNVRFADTYQGKIPVSFRFKMpTGPEQMIKIH-KEFRTEPNLVNQLLHRNARNVTvitaTQYTGEEFFQGGlNQFKNQLSDQLNegvyetrraqveveatelapvskdqldsralqkhkqlvwktvlvydesnkpkrgeNPLRQYDIEVTQVL 354
                 678999999988889**********************87655.4444444455999*********************************98888888888.888*****************999999***********88************888888888888888888888888888888877777777777777766666555555999999988775 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.00016
  PF01145.20 141 dvritdvdpppevkqalakkqaaeaeaa....eaeiaraea 177
                  v + d++p+p +++ l +k++ +a+++    e+e+++a+a
  MMETSP1325-20131115|1645_1 425 KVLLSDPRPEPALEKLLVDKKRLVADRIkavqEQETSKAQA 465
                 58899***********9999999999999955444444444 PP

  == domain 3    score: -12.7 bits;  conditional E-value: 1
  PF01145.20 140 v..dvritdvdpppevkqa..lakkqaaeaeaaeaeiarae 176
                    +++i++++ ++++ +a  +a+k +aeae   a+  ra+
  MMETSP1325-20131115|1645_1 530 AkaNFDIQKANSDASIYEAkaIAAKGKAEAEV-LAAMYRAK 569
                 13344455555445444444466666666666.55555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (644 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1374  (0.100497); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.08u 0.35s 00:00:01.43 Elapsed: 00:00:00.63
# Mc/sec: 2449.61
//
Query:       MMETSP1325-20131115|1655_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-07   28.3   0.2    3.1e-06   26.7   0.0    1.8  2  PF05347.10 Complex 1 protein (LYR family)
    6.3e-06   26.2   0.0    1.3e-05   25.1   0.0    1.7  1  PF13232.1  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> PF05347.10  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   4.5e-10   3.1e-06       5      54 ..      64     111 ..      61     115 .. 0.94
   2 ?   -1.4   0.0      0.27   1.8e+03      22      34 ..     141     153 ..     125     153 .. 0.55

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 4.5e-10
  PF05347.10   5 sLYRalLRaarkfpdynareyirrriReeFrknknvtdpekieallkegk 54 
                  L+++++  +r++p +    y+r+++Re+  knk+++dp++i +++k+g+
  MMETSP1325-20131115|1655_1  64 DLFKRFIYVGRDYPIPP--PYVRDKAREAILKNKDLSDPREIIEAVKRGR 111
                 699999999*****999..*****************************97 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.27
  PF05347.10  22 areyirrriReeF 34 
                   + + +++++eF
  MMETSP1325-20131115|1655_1 141 PIATLSQKAKDEF 153
                 4556677777777 PP

>> PF13232.1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   1.9e-09   1.3e-05       5      58 ..      64     115 ..      60     153 .. 0.88

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 1.9e-09
   PF13232.1   5 sLYRalLrearrfpsyssreyfrrriRdeFrknknvtdpekiakllkegqeeLe 58 
                  L+++ +  +r++p +     +r+++R++  knk+++dp++i +++k+g++  +
  MMETSP1325-20131115|1655_1  64 DLFKRFIYVGRDYPIPPPY--VRDKAREAILKNKDLSDPREIIEAVKRGRWMVK 115
                 6888888888999966655..*****************************9544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 683.41
//
Query:       MMETSP1325-20131115|1658_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 365.99
//
Query:       MMETSP1325-20131115|1661_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 252.47
//
Query:       MMETSP1325-20131115|1653_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 1063.38
//
Query:       MMETSP1325-20131115|1662_1  [L=500]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-20   71.9   4.8    6.5e-08   32.0   0.1    5.9  6  PF00400.27 WD domain, G-beta repeat
      0.002   17.5   0.0       0.28   10.6   0.0    3.5  3  PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.024   14.1   0.0       0.39   10.3   0.0    2.3  2  PF12133.3  Open reading frame 6 from SARS coronavirus


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       0.4   1.8e+03       8      20 ..     128     139 ..     124     150 .. 0.77
   2 !   13.7   0.0   8.7e-06      0.04      12      39 .]     182     210 ..     174     210 .. 0.89
   3 !    9.2   0.0   0.00023         1      10      38 ..     232     264 ..     230     265 .. 0.93
   4 !   32.0   0.1   1.4e-11   6.5e-08       4      38 ..     328     363 ..     325     364 .. 0.95
   5 !   10.5   0.8   8.7e-05      0.39      12      39 .]     381     409 ..     380     409 .. 0.94
   6 ?    1.3   0.0     0.071   3.2e+02      15      38 ..     448     471 ..     447     472 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.4
                 ESSSSSEEEEEEE CS
  PF00400.27   8 rgHtspVtcvafs 20 
                 ++   +Vt++ ++
  MMETSP1325-20131115|1662_1 128 TAG-RTVTSMVWN 139
                 555.79*****98 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 8.7e-06
                 SSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  12 spVtcvafspd.gpllasgSrDgtirlWd 39 
                 s+Vt+v+fs   ++lla g +Dgt+ +++
  MMETSP1325-20131115|1662_1 182 SGVTAVDFSSKmPNLLAVGMYDGTVAIYN 210
                 89***********************9985 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.00023
                 SSSSEEEEEEESS....STEEEEEETTSEEEEE CS
  PF00400.27  10 HtspVtcvafspd....gpllasgSrDgtirlW 38 
                 H +pV+ v++ +     g  l+s S Dg +  W
  MMETSP1325-20131115|1662_1 232 HMDPVWQVKWIDKgperGETLVSISTDGRVVEW 264
                 899*************************99877 PP

  == domain 4    score: 32.0 bits;  conditional E-value: 1.4e-11
                 EEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEE CS
  PF00400.27   4 katlrgHtspVtcvafspd.gpllasgSrDgtirlW 38 
                 + t++gHt+pV+ +++sp  ++ ++s+S+D t++lW
  MMETSP1325-20131115|1662_1 328 LETYTGHTGPVYRIRCSPFwPTAFLSCSADWTVKLW 363
                 6799******************************** PP

  == domain 5    score: 10.5 bits;  conditional E-value: 8.7e-05
                 SSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  12 spVtcvafspd.gpllasgSrDgtirlWd 39 
                 + V ++a+sp+ ++++ s   Dg + +Wd
  MMETSP1325-20131115|1662_1 381 DVVHDIAWSPTtSTIFGSVTGDGRVEIWD 409
                 56999***********************9 PP

  == domain 6    score: 1.3 bits;  conditional E-value: 0.071
                 EEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  15 tcvafspdgpllasgSrDgtirlW 38 
                 t++ fs++ p+la g + g +r++
  MMETSP1325-20131115|1662_1 448 TAILFSDTEPVLAVGDETGAVRVY 471
                 6899***********999999997 PP

>> PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   6.1e-05      0.28      11      38 ..     181     209 ..     165     214 .. 0.82
   2 ?   -1.9   0.0      0.49   2.2e+03      13      22 ..     382     391 ..     370     396 .. 0.74
   3 ?    2.1   0.0     0.027   1.2e+02       6      38 ..     438     471 ..     436     471 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 6.1e-05
   PF12894.2  11 parvkfiswcPtmD.LiAlatekgelaly 38 
                 p+ v +++++++m+ L+A+++ +g +a+y
  MMETSP1325-20131115|1662_1 181 PSGVTAVDFSSKMPnLLAVGMYDGTVAIY 209
                 44599********77************98 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.49
   PF12894.2  13 rvkfiswcPt 22 
                  v  i+w+Pt
  MMETSP1325-20131115|1662_1 382 VVHDIAWSPT 391
                 466699***9 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.027
   PF12894.2   6 aeknlparvk.fiswcPtmDLiAlatekgelaly 38 
                 ++k + ++++ +i ++ t + +A++ e+g + +y
  MMETSP1325-20131115|1662_1 438 EDKGVECPAQtAILFSDTEPVLAVGDETGAVRVY 471
                 588899999999*****************99987 PP

>> PF12133.3  Open reading frame 6 from SARS coronavirus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.063   2.9e+02       5      29 ..     187     211 ..     184     214 .. 0.93
   2 ?   10.3   0.0   8.6e-05      0.39      22      55 ..     403     436 ..     382     440 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.063
   PF12133.3   5 vdfqvtiaeiliiimrtfriaiwnl 29 
                 vdf   + ++l + m    +ai+nl
  MMETSP1325-20131115|1662_1 187 VDFSSKMPNLLAVGMYDGTVAIYNL 211
                 99**********************9 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 8.6e-05
   PF12133.3  22 friaiwnldvlissivrqlfkPltkknyseldde 55 
                  r+ iw+l v +   v  lf   tk n  e+dde
  MMETSP1325-20131115|1662_1 403 GRVEIWDLSVSMLDPVVCLFSDGTKNNVLEFDDE 436
                 59********9999999****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.37s 00:00:01.18 Elapsed: 00:00:00.56
# Mc/sec: 2139.60
//
Query:       MMETSP1325-20131115|1663_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-08   33.1   2.1    5.7e-08   32.8   1.4    1.1  1  PF12697.2 Alpha/beta hydrolase family
     0.0018   17.9   0.0     0.0029   17.2   0.0    1.3  1  PF12695.2 Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   1.4   8.4e-12   5.7e-08      47     205 ..      35     199 ..       2     202 .. 0.66

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 8.4e-12
                 --HHHHHHHHHHHHHH--.--EEEE--------HHHHHH----.EEEEEEE------STT...---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH--GGGG....GG...........------HHHHTT-..-S-EEEEE-----HHHHHHHHHHHHHSTTE CS
   PF12697.2  47 dtledlaadlaalldalglrpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpas...alrpagpsllrrllagraaalrdlaarafarlfdgdelealvradaaalaellraa...........lldadlrealarl..dvPvlviageaDrvvppeearrlaealpga 205
                  ++++ +a la+l+ +    p+v+v+   ++ va  +++++    +glvl++p++p+p +   +l +ag      l ++++ a  ++++++  ++++ +  e ++r++ a +++++                d++++  l+ +   +Pvl+i  +aD++vp++e++   ++l+g+
  MMETSP1325-20131115|1663_1  35 GSWREEVAGLAQLASRG--VPPVIVASGCAAHVACKYLESH--AASGLVLVAPFPPSPGGcaeRLMSAG------LTGMGSVADGRVRSEPSPEQVTTAATEGMLRSQQALVITTMAMTitnaplsywrrAXDPSAALKLEPIalIMPVLIIGTSADPIVPADEVALSCAKLGGW 199
                 56777777777776663..4899999999*********985..58**********88887755333333......33444555555666666666666666666666444444443333454455544322333333333333235****************9999888888776 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   4.3e-07    0.0029      21     122 ..       3     191 ..       1     208 [. 0.74

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 4.3e-07
   PF12695.2  21 alakrgfavvavdlpghgas..egaaaakrvl.........aadll.dleriilvGhSlGGgvalelagrddrvkglvllapfpd..g...edlakltl..........................................................................pvllihGtrDgvvppeeaek 122
                 al++ gf + av  +   a   e  a+a ++l          a+l+ +  + ++v     ++va+ + +++  ++glvl+apfp   g   e+l                                                                               pvl+i+ ++D +vp++e++ 
  MMETSP1325-20131115|1663_1   3 ALSQIGFECSAVRSSAADAGadETGARAHSLLgswreevagLAQLAsRGVPPVIVASGCAAHVACKYLESH-AASGLVLVAPFPPspGgcaERLM---SagltgmgsvadgrvrsepspeqvttaategmlrsqqalvittmamtitnaplsywrraxdpsaalklepialimPVLIIGTSADPIVPADEVAL 191
                 56666777777754443332113333444444666555445233335555777777778899999999987.99********9443321113333...2444777888888888888899999999999**********************************************************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.65
# Mc/sec: 943.80
//
Query:       MMETSP1325-20131115|1664_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0019   17.6   6.2      0.034   13.6   0.7    2.8  2  PF12799.2  Leucine Rich repeats (2 copies)
      0.002   17.7   1.4      0.044   13.4   0.2    2.9  2  PF13855.1  Leucine rich repeat
     0.0038   16.9   4.9        1.1    9.4   0.4    3.8  3  PF00560.28 Leucine Rich Repeat
     0.0068   16.0   0.0        2.4    7.8   0.0    2.1  2  PF05771.6  Poxvirus A31 protein
  ------ inclusion threshold ------
      0.013   15.3   0.7          6    6.8   0.0    2.6  2  PF05725.7  FNIP Repeat
       0.02   14.7   5.3        9.1    6.5   0.1    3.9  4  PF13516.1  Leucine Rich repeat
      0.033   14.2   4.6        7.8    7.0   0.1    4.1  3  PF13504.1  Leucine rich repeat
      0.036   13.6   0.2        5.1    6.7   0.0    2.6  3  PF13013.1  F-box-like domain


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.8   0.00019      0.32       4      35 ..      35      66 ..       4      68 .. 0.70
   2 !   13.6   0.7     2e-05     0.034       3      24 ..      57      87 ..      57      91 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00019
   PF12799.2  4 evLdLsnN.nIk.dlppelanLpn..LktLnLsnNp 35
                + L+L+++ n++ d      +L++  L++LnLs+N 
  MMETSP1325-20131115|1664_1 35 TDLNLAGCeNLEgD----MESLKDcpLQVLNLSGND 66
                44555554333333....334555669999**9996 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 2e-05
   PF12799.2  3 LevLdLsnN.........nIkdlppelanLp 24
                L+vL+Ls+N         n+kdlp ++ nL+
  MMETSP1325-20131115|1664_1 57 LQVLNLSGNdyypskftgNLKDLPKSITNLN 87
                9****************99******999994 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.21   3.6e+02      46      59 ..       4      17 ..       1      19 [. 0.78
   2 !   13.4   0.2   2.6e-05     0.044       2      35 ..      33      65 ..      22      66 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.21
   PF13855.1 46 kgLpsLreLnLsgN 59
                +gL++++e+nL + 
  MMETSP1325-20131115|1664_1  4 NGLNAITEVNLTSK 17
                78999999999775 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 2.6e-05
   PF13855.1  2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgn 35
                ++++L+L +++  + + +++k+++ L+vL+Lsgn
  MMETSP1325-20131115|1664_1 33 SITDLNLAGCENLEGDMESLKDCP-LQVLNLSGN 65
                456677777744455666777777.777777766 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0061        10       2      19 ..      34      52 ..      33      55 .. 0.78
   2 !    9.4   0.4   0.00064       1.1       2      18 ..      57      82 ..      56      86 .. 0.66
   3 ?    0.9   0.1       0.4   6.8e+02       2      10 ..      83      91 ..      82      92 .] 0.81

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0061
                ESEEEETSS.BCB.CHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppsl 19
                ++ L+L g+ nl+ +  + l
  MMETSP1325-20131115|1664_1 34 ITDLNLAGCeNLEgDMES-L 52
                678*********977766.5 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00064
                ESEEEETSS.BCBC........HHHH CS
  PF00560.28  2 LeeLdLsgN.nlts........lpps 18
                L++L+LsgN    s        lp+s
  MMETSP1325-20131115|1664_1 57 LQVLNLSGNdYYPSkftgnlkdLPKS 82
                9********55444555555556555 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.4
                ESEEEETSS CS
  PF00560.28  2 LeeLdLsgN 10
                ++ L+L+ +
  MMETSP1325-20131115|1664_1 83 ITNLNLREC 91
                688999988 PP

>> PF05771.6  Poxvirus A31 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0031       5.2      83     105 ..      19      41 ..       6      49 .. 0.86
   2 !    7.8   0.0    0.0014       2.4      81     105 ..      66      90 ..      52      92 .] 0.88

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0031
   PF05771.6  83 yGisleGkiykLGksikdLslre 105
                  G + +G+i+ L +si+dL+l +
  MMETSP1325-20131115|1664_1  19 VGFNVAGNIKDLPQSITDLNLAG 41 
                 6999***************9965 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0014
   PF05771.6  81 kyyGisleGkiykLGksikdLslre 105
                  yy  + +G+++ L ksi++L+lre
  MMETSP1325-20131115|1664_1  66 DYYPSKFTGNLKDLPKSITNLNLRE 90 
                 5999999****************97 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0035         6       1      19 [.      21      39 ..      21      43 .. 0.83
   2 ?    6.3   0.1    0.0049       8.5       9      21 ..      78      89 ..      72      92 .] 0.80

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0035
   PF05725.7  1 FNqiikigeLPsnleiLil 19
                FN +  i  LP++++ L+l
  MMETSP1325-20131115|1664_1 21 FNVAGNIKDLPQSITDLNL 39
                7777888999999999988 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0049
   PF05725.7  9 eLPsnleiLilgr 21
                 LP+++++L+l r
  MMETSP1325-20131115|1664_1 78 DLPKSITNLNL-R 89
                69999999998.5 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0         2   3.4e+03       4      11 ..       9      16 ..       6      28 .. 0.58
   2 ?    5.0   0.0     0.017        29       2      13 ..      32      43 ..      31      54 .. 0.81
   3 ?    6.5   0.1    0.0053       9.1       4      13 ..      57      66 ..      55      76 .. 0.91
   4 ?    3.5   0.0     0.051        86       2      12 ..      81      91 ..      80      92 .] 0.88

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 2
   PF13516.1  4 LtsLdLsn 11
                +t+ +L +
  MMETSP1325-20131115|1664_1  9 ITEVNLTS 16
                55555543 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.017
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L ++ 
  MMETSP1325-20131115|1664_1 32 QSITDLNLAGCE 43
                689******995 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.0053
   PF13516.1  4 LtsLdLsnNq 13
                L++L+Ls+N+
  MMETSP1325-20131115|1664_1 57 LQVLNLSGND 66
                99******96 PP

  == domain 4    score: 3.5 bits;  conditional E-value: 0.051
   PF13516.1  2 knLtsLdLsnN 12
                k++t+L+L  +
  MMETSP1325-20131115|1664_1 81 KSITNLNLREC 91
                689*****988 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1     0.017        29       3      14 ..      34      46 ..      32      56 .. 0.82
   2 ?    7.0   0.1    0.0046       7.8       3      16 ..      57      79 ..      51      80 .. 0.71
   3 ?    1.2   0.1      0.39   6.7e+02       3      11 ..      83      91 ..      81      92 .] 0.81

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.017
   PF13504.1  3 LkeLdLsgnr.Lt 14
                 ++L+L+g++ L+
  MMETSP1325-20131115|1664_1 34 ITDLNLAGCEnLE 46
                589******8675 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0046
   PF13504.1  3 LkeLdLsgn.........rLtsL 16
                L++L+Lsgn         +L++L
  MMETSP1325-20131115|1664_1 57 LQVLNLSGNdyypskftgNLKDL 79
                89******955555444335555 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.39
   PF13504.1  3 LkeLdLsgn 11
                 ++L+L+ +
  MMETSP1325-20131115|1664_1 83 ITNLNLREC 91
                589999988 PP

>> PF13013.1  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.003       5.1      11      39 ..      15      44 ..       8      55 .. 0.77
   2 ?   -0.5   0.0      0.53     9e+02      21      32 ..      51      62 ..      44      66 .. 0.84
   3 ?    4.3   0.0     0.017        29      21      37 ..      75      91 ..      62      92 .] 0.82

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.003
   PF13013.1 11 snkppkaqsl.tllDLPdellelIfnyCkd 39
                ++k++ ++    + DLP+ +  l + +C++
  MMETSP1325-20131115|1664_1 15 TSKKVGFNVAgNIKDLPQSITDLNLAGCEN 44
                455555554457****************86 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.53
   PF13013.1 21 tllDLPdellel 32
                +l D+P ++l+l
  MMETSP1325-20131115|1664_1 51 SLKDCPLQVLNL 62
                6899**999986 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.017
   PF13013.1 21 tllDLPdellelIfnyC 37
                 l DLP+ + +l ++ C
  MMETSP1325-20131115|1664_1 75 NLKDLPKSITNLNLREC 91
                599*********99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 400.85
//
Query:       MMETSP1325-20131115|1665_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-13   48.6   0.0    5.9e-13   48.3   0.0    1.1  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    3.1e-10   39.4   0.0    3.9e-10   39.0   0.0    1.2  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    4.3e-07   29.7   0.0    5.2e-07   29.4   0.0    1.1  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.011   15.2   0.0      0.011   15.2   0.0    1.1  1  PF04847.7  Calcipressin
      0.098   12.3   0.0       0.11   12.1   0.0    1.2  1  PF11608.3  Limkain b1


Domain annotation for each model (and alignments):
>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   0.0   2.1e-16   5.9e-13       4      55 ..       7      61 ..       6      62 .. 0.96

  Alignments for each domain:
  == domain 1    score: 48.3 bits;  conditional E-value: 2.1e-16
   PF13893.1  4 lfskfGkverikifrkk...ggqAfvefdtveaArkakeylngvklygktLkvey 55
                 +++fG+v++++i r++   +g++fvef++ ea +ka ++l+g+ ++g++++v y
  MMETSP1325-20131115|1665_1  7 ECQQFGEVVSVTIPRQGapgTGKVFVEFSSQEASQKASQTLSGRTFDGRRVEVTY 61
                69*****************88********************************98 PP

>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   1.4e-13   3.9e-10      19      69 ..       8      57 ..       2      58 .. 0.94

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 1.4e-13
                HCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17 19 FskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklggrel 69
                 ++fG+++s++++r +  + +g  fVeF s+e+ +kA ++l g++++gr++
  MMETSP1325-20131115|1665_1  8 CQQFGEVVSVTIPR-QGAPGTGKVFVEFSSQEASQKASQTLSGRTFDGRRV 57
                689***********.7*********************************97 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   1.9e-10   5.2e-07      20      69 .]       9      58 ..       2      58 .. 0.89

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 1.9e-10
   PF14259.1 20 spygkvegvriprnkdgrgrgfAfvefeseedAqkalkkln.lvlkgrtir 69
                 ++g v +v ipr    +g+g  fvef+s+e+ qka + l    ++gr ++
  MMETSP1325-20131115|1665_1  9 QQFGEVVSVTIPRQG-APGTGKVFVEFSSQEASQKASQTLSgRTFDGRRVE 58
                689*********963.478********************988******996 PP

>> PF04847.7  Calcipressin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0     4e-06     0.011      32      69 ..      27      62 ..       3      71 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 4e-06
   PF04847.7 32 Frrvivifsseeaaeaarsksdwegeefegkklrlyfa 69
                 ++v v fss+ea+++a + ++  g  f g+++++ ++
  MMETSP1325-20131115|1665_1 27 TGKVFVEFSSQEASQKASQTLS--GRTFDGRRVEVTYF 62
                589*****************99..**********9998 PP

>> PF11608.3  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.1e-05      0.11      42      80 ..      30      68 ..      11      72 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.1e-05
   PF11608.3 42 avlrfanqeaaeRalkRleneDvfGnritvsespkeref 80
                  + f++qea+++a + l +    G+r+ v   p+++ +
  MMETSP1325-20131115|1665_1 30 VFVEFSSQEASQKASQTLSGRTFDGRRVEVTYFPEDKAK 68
                4689***************************99998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 343.01
//
Query:       MMETSP1325-20131115|1667_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-16   60.3   0.0    1.2e-16   60.2   0.0    1.0  1  PF00225.18 Kinesin motor domain
  ------ inclusion threshold ------
       0.14   11.7   0.0       0.14   11.6   0.0    1.1  1  PF00308.13 Bacterial dnaA  protein


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   0.0   1.8e-20   1.2e-16      49     108 ..       2      71 ..       1      73 [] 0.91

  Alignments for each domain:
  == domain 1    score: 60.2 bits;  conditional E-value: 1.8e-20
                 EETTS-HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-............TTTTC---HHHHH CS
  PF00225.18  49 fdeeatqeevyeelakplvesvleGynvtifaYGqtgsGKTytmeGk...........eeeeekGiipral 108
                 f+ e+ qe++y+++ ++   +v+eG+n+t+faYGqtgsGKT+tm G            ++++e G+ipra+
  MMETSP1325-20131115|1667_1   2 FGDESVQEDIYQHV-SDCAVAVVEGFNATVFAYGQTGSGKTHTMFGPpghvqslaygsSPNDESGVIPRAI 71 
                 66777899999995.899999*************************************88889******97 PP

>> PF00308.13  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.1e-05      0.14      28      51 ..      20      44 ..       5      55 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.1e-05
                H----.--.-EEEE-------HHHH CS
  PF00308.13 28 eapgkkyn.PlfiygevGlGKtHLL 51
                 a  + +n  +f yg++G GKtH +
  MMETSP1325-20131115|1667_1 20 VAVVEGFNaTVFAYGQTGSGKTHTM 44
                444455662589***********76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.43s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 349.87
//
Query:       MMETSP1325-20131115|1656_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 190.82
//
Query:       MMETSP1325-20131115|1668_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 724.01
//
Query:       MMETSP1325-20131115|1669_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00036   20.2   0.0     0.0011   18.7   0.0    1.8  2  PF12812.2 PDZ-like domain
  ------ inclusion threshold ------
      0.024   14.4   0.0       0.03   14.0   0.0    1.2  1  PF13180.1 PDZ domain


Domain annotation for each model (and alignments):
>> PF12812.2  PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.6e-07    0.0011       6      77 ..       2      73 ..       1      74 [. 0.77
   2 ?   -2.0   0.0      0.44     3e+03      52      66 ..     100     114 ..      78     122 .. 0.64

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1.6e-07
   PF12812.2  6 rfvevaGatfhdLsyqqaRsyaipvkgvyvs.easgsfslaskekkgviitsinnkptpnLdefievlkklpd 77
                r++ +aG+ ++  sy++   ++     +y s    gs++  ++ k++  i  +n+ p+ + d++ie+++++pd
  MMETSP1325-20131115|1669_1  2 RILVWAGMLLQC-SYRAIQEMGKGASDIYCSyYLYGSPAHFYGMKSCKYIVAVNGTPVHTIDDLIELVQEIPD 73
                889999999999.999999987766544443033455555566777778889********************8 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.44
   PF12812.2  52 viitsinnkptpnLd 66 
                 +  t++ + pt +Ld
  MMETSP1325-20131115|1669_1 100 WPTTEMKRDPTGQLD 114
                 444555556666665 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.4e-06      0.03      24      70 ..      36      82 ..      21      95 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 4.4e-06
   PF13180.1 24 ssPaakaglkpGDiilkvdgkkvksltdlkslllkkkpGdtvkltvl 70
                +sPa+  g+k+   i++v+g++v++ +dl++l+      + vkl+ +
  MMETSP1325-20131115|1669_1 36 GSPAHFYGMKSCKYIVAVNGTPVHTIDDLIELVQEIPDMTAVKLKCV 82
                78999999999999******************998888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 683.22
//
Query:       MMETSP1325-20131115|1670_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       400  (0.0292569); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 917.07
//
Query:       MMETSP1325-20131115|1671_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 421.97
//
Query:       MMETSP1325-20131115|1660_1  [L=544]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-71  238.9   0.0      6e-71  238.2   0.0    1.4  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain
    6.1e-21   74.8   0.5    1.5e-20   73.6   0.4    1.6  1  PF00306.22 ATP synthase alpha/beta chain, C terminal domain
    3.3e-18   65.5   1.9    7.9e-18   64.3   1.3    1.7  1  PF02874.18 ATP synthase alpha/beta family, beta-barrel domain
    8.1e-06   25.5   1.7    3.1e-05   23.6   1.2    2.0  1  PF09378.5  HAS barrel domain
  ------ inclusion threshold ------
      0.015   14.2   0.1      0.031   13.2   0.1    1.5  1  PF06745.8  KaiC
        7.1    6.3   7.8        4.6    6.9   0.1    3.7  5  PF09953.4  Uncharacterized protein conserved in bacteria (DUF2187)


Domain annotation for each model (and alignments):
>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.2   0.0   2.6e-74     6e-71       1     215 []     187     406 ..     187     406 .. 0.97

  Alignments for each domain:
  == domain 1    score: 238.2 bits;  conditional E-value: 2.6e-74
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00006.20   1 tgirvlDslfPivqGqttlipGafgcGktvisqslsknsn...sdai..iyvgiGergnevaevleefrkepimkrttlvantsnepvaareasiytgitlAeyfrdqgknVlliaDslsrwaealreisgrlgempadqgypaylgaklaslyeRagkagspdriGSvtivaavspaggdfsdpvttstlgitdvfivLdkklaqrkhfPaintlvSyS 215
                 tg +++D+l+Pi++Gq++li+G++++Gkt i+ +++ n++    da   iyvg+G++++++a+++ +++++++m + ++va+t+++++  +++++ytg++++eyfrd+gk+ ++++D+ls++a a+r++s++l+++p++++yp+++++ +++l+eRa+k++ ++++GS+t+++++++++gd+s++++t++++itd++i+L ++l+ ++++Pai+++ S+S
  MMETSP1325-20131115|1660_1 187 TGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKtkgDDALmcIYVGVGQKRSTIAQLVGSLENSEAMGNCIVVAATASDSAPLQFLAPYTGCAMGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNITEGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLASELFYQGQRPAIDVGLSVS 406
                 89*************************************6333344478*************************************************************************************************************************************************************************98 PP

>> PF00306.22  ATP synthase alpha/beta chain, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6   0.4   6.4e-24   1.5e-20       1     110 [.     418     519 ..     418     531 .. 0.87

  Alignments for each domain:
  == domain 1    score: 73.6 bits;  conditional E-value: 6.4e-24
                 HHHHHHHHHHHHHHHHHHCCHHH--.TTS-HHHHHHHHHHHHHHHHT---TTGGG.......-.HHHHHHHHHHCC----TTS-GGGHHHHHHHHHHH..HHHHHHHHHHHH CS
  PF00306.22   1 kqvagklkleLaqyrElaafvqlvGsdaLseedkltlerarrleefLkQnqysplpvekqvvsiveetidlfyallrgklddlpeeelekigtkdiek..elnkeleeklkk 110
                 kqv+g++kl+LaqyrE+aaf++ +Gsd L+++++++l+r+ rl e+LkQ+qy+pl         vee+  ++ a ++g++d+++ e++  ++   +e+  + + ++ +++k+
  MMETSP1325-20131115|1660_1 418 KQVSGTMKLDLAQYREVAAFAK-FGSD-LDAATQQQLNRGVRLYELLKQDQYVPL-------E-VEEQAVILFAGVKGFIDRVAVEDVIAFEAAWLEHikTSHPDILAEIKS 519
                 8*********************.7*99.***************************.......8.999999999999999999998888888777777666666666666665 PP

>> PF02874.18  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   1.3   3.5e-21   7.9e-18       3      69 .]      65     131 ..      63     131 .. 0.98

  Alignments for each domain:
  == domain 1    score: 64.3 bits;  conditional E-value: 3.5e-21
                 CC---EEEEE-STTEE--TTTEEEEEEEEES-EEEEEEEEE-SSEEEEEEB---TT-B----EEEEE CS
  PF02874.18   3 qviGpVvdvefgigrlpgiynalkvelvefgklvlgvalnlgddkVriiamgstdGlkrGdeVkdTG 69 
                 +++G V++v++gi+r++g+ n++++e+vef+ +++g+alnl++ +V+++++g+++ + +Gd V +TG
  MMETSP1325-20131115|1660_1  65 AETGKVISVGDGIARVYGLANVQAGEMVEFSCGLRGMALNLEESNVGVVIFGDDREILEGDQVARTG 131
                 689***************************************************************9 PP

>> PF09378.5  HAS barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   1.2   1.3e-08   3.1e-05       4      84 ..      66     119 ..      65     148 .. 0.88

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 1.3e-08
   PF09378.5   4 vvGevss.sdlifrveglkdvrvGeyVeielqdgekvlGmvldiergselsndlalvlslkeidesigdiegvvatedtgvk 84 
                 ++G+v s +d+i+rv+gl++v  Ge+Ve+         Gm+l++e+                       ++gvv+++d   +
  MMETSP1325-20131115|1660_1  66 ETGKVISvGDGIARVYGLANVQAGEMVEFS----CGLRGMALNLEE----------------------SNVGVVIFGDD--R 119
                 58999999**********************....68**********......................********987..3 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   1.4e-05     0.031       1      67 [.     185     251 ..     185     274 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.4e-05
   PF06745.8   1 vktgIeglDellkgGipegrvvlitGepGtGKtifalqFlikgaeeygep...gvfvtveesaedlrena 67 
                 v+tg +  D l+   i +g+  li G+  tGKt +a   +i++  + g+    +++v v ++++ + + +
  MMETSP1325-20131115|1660_1 185 VQTGLKAVDALI--PIGRGQRELIIGDRQTGKTAIAIDTIINQKTK-GDDalmCIYVGVGQKRSTIAQLV 251
                 689999999999..67799999*********************888.66434488999988887766554 PP

>> PF09953.4  Uncharacterized protein conserved in bacteria (DUF2187)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         1   2.3e+03       3      16 ..      64      77 ..      63      80 .. 0.85
   2 ?    6.9   0.1     0.002       4.6       5      28 ..      87     110 ..      83     117 .. 0.81
   3 ?    1.3   0.1      0.11   2.6e+02       2      20 ..     126     146 ..     126     148 .. 0.81
   4 ?   -1.3   0.0      0.74   1.7e+03      35      49 ..     464     478 ..     450     484 .. 0.82
   5 ?   -2.7   0.0         2   4.6e+03      14      29 ..     481     496 ..     471     497 .. 0.76

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1
   PF09953.4  3 iAevGdiiEFkdGl 16
                 Ae+G +i   dG+
  MMETSP1325-20131115|1660_1 64 YAETGKVISVGDGI 77
                599*****999997 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.002
   PF09953.4   5 evGdiiEFkdGlkGivekvnensv 28 
                 + G+++EF  Gl+G+   + e  v
  MMETSP1325-20131115|1660_1  87 QAGEMVEFSCGLRGMALNLEESNV 110
                 67************9888887766 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.11
   PF09953.4   2 kiAevGdiiEFk..dGlkGiv 20 
                 ++A++G i+E    +Gl G+v
  MMETSP1325-20131115|1660_1 126 QVARTGAIVEVAvgEGLLGRV 146
                 689*******75448899988 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 0.74
   PF09953.4  35 menfrdLdleektvv 49 
                  +++  L++ee+ v+
  MMETSP1325-20131115|1660_1 464 QDQYVPLEVEEQAVI 478
                 688999******998 PP

  == domain 5    score: -2.7 bits;  conditional E-value: 2
   PF09953.4  14 dGlkGivekvnensvi 29 
                  G+kG +++v    vi
  MMETSP1325-20131115|1660_1 481 AGVKGFIDRVAVEDVI 496
                 5899999999877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.48
# Mc/sec: 2715.87
//
Query:       MMETSP1325-20131115|1673_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1139.49
//
Query:       MMETSP1325-20131115|1674_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|1675_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-16   59.7   0.0    3.4e-16   59.0   0.0    1.3  1  PF02296.11 Alpha adaptin AP2, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02296.11  Alpha adaptin AP2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   0.0   2.5e-20   3.4e-16       1     110 [.      91     205 ..      91     207 .. 0.83

  Alignments for each domain:
  == domain 1    score: 59.0 bits;  conditional E-value: 2.5e-20
  PF02296.11   1 FleptelsaedFfkrWkqlggapreaqkifklkaaekeideesvrkvleGfrlavlkgvdpnpenivgagvlhtsesgk......vgcllrlepnkqakmvrltiratdesvskal 110
                 F+e + ++  dF +rW +++++  e+q +f+ k+  +    + +  +++G+ + v + + +np+ i +ag l+t ++        vgcl+ le n+qa+ +rlt+r++  svsk+ 
  MMETSP1325-20131115|1675_1  91 FIEGVPMQGADFGQRWGNMSAEGLEMQGVFNGKDPINVSAMPGMVSKVTGLAV-VPDMLAANPNVINAAGTLKTGSKDAnqnqiqVGCLMMLEMNAQAQAYRLTVRTQIPSVSKTF 205
                 89999**************************6655555555666667777765.4588999************975432335677***************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.31s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 920.03
//
Query:       MMETSP1325-20131115|1678_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 282.43
//
Query:       MMETSP1325-20131115|1679_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.045   12.5   0.0      0.045   12.5   0.0    1.1  1  PF01062.16 Bestrophin, RFP-TM, chloride channel


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.3e-06     0.045     192     241 ..     102     151 ..      47     153 .] 0.86

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.3e-06
  PF01062.16 192 alkaldeelnelrealggleridwtpiPlaYtqlvhlavylyflllpfgl 241
                 + +++++++++lr a++++    + p+PlaY  +++++v + ++l pf  
  MMETSP1325-20131115|1679_1 102 LNMSFQTKIEALRGAIAHIGFELQLPVPLAYAHMMQFFVDTICCLYPFVA 151
                 456788999**************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 814.76
//
Query:       MMETSP1325-20131115|1676_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-93  310.8   1.5    9.8e-93  310.6   1.0    1.1  1  PF10498.4  Intra-flagellar transport protein 57
    0.00022   19.5  12.4    0.00029   19.1   8.6    1.2  1  PF05911.6  Plant protein of unknown function (DUF869)
     0.0005   18.5   7.6    0.00069   18.1   5.3    1.3  1  PF13166.1  AAA domain
    0.00069   18.2   7.4    0.00069   18.2   5.1    1.6  2  PF08317.6  Spc7 kinetochore protein
     0.0026   16.9   4.9     0.0041   16.3   3.4    1.2  1  PF09789.4  Uncharacterized coiled-coil protein (DUF2353)
      0.006   16.0   0.3      0.013   14.9   0.2    1.6  1  PF04289.7  Protein of unknown function (DUF447)
     0.0069   16.3   5.5      0.014   15.3   3.8    1.5  1  PF06818.10 Fez1
     0.0095   14.4  17.9      0.022   13.2  12.4    1.6  1  PF05701.6  Plant protein of unknown function (DUF827)
  ------ inclusion threshold ------
      0.011   15.3   5.3       0.11   12.1   3.2    2.5  2  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
       0.02   14.9   9.3      0.026   14.5   5.2    1.9  1  PF08702.5  Fibrinogen alpha/beta chain family
      0.029   13.4   1.7       0.05   12.6   1.2    1.3  1  PF04582.7  Reovirus sigma C capsid protein
      0.053   13.3   5.5       0.82    9.4   0.1    3.1  3  PF09486.5  Bacterial type III secretion protein (HrpB7)
      0.057   12.2   8.0      0.087   11.6   5.5    1.3  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
      0.068   12.3   9.2       0.22   10.6   4.8    2.1  2  PF05549.6  Allexivirus 40kDa protein
      0.077   13.1  10.0       0.47   10.6   4.2    3.5  2  PF05531.7  Nucleopolyhedrovirus P10 protein
      0.099   12.5   7.2          1    9.3   2.4    2.3  2  PF02050.11 Flagellar FliJ protein
       0.14   12.4  12.7       0.16   12.2   3.5    3.8  4  PF09177.6  Syntaxin 6, N-terminal
       0.14   11.9  11.1      0.031   14.1   5.0    2.0  2  PF13863.1  Domain of unknown function (DUF4200)
       0.23   11.1  15.7       0.23   11.1   1.4    3.7  4  PF07889.7  Protein of unknown function (DUF1664)
       0.27   10.9   9.7        3.2    7.4   2.0    2.5  2  PF00669.15 Bacterial flagellin N-terminal helical region
       0.47    9.9  11.4        1.3    8.4   7.9    1.8  1  PF04156.9  IncA protein
       0.48   11.0   6.7        3.8    8.1   0.1    2.7  2  PF07303.8  Occludin homology domain
       0.54   10.1   9.3      0.086   12.7   2.4    2.8  2  PF06013.7  Proteins of 100 residues with WXG
       0.57    9.9   8.9        2.3    8.0   1.2    3.1  2  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.57    9.5  12.0       0.94    8.8   5.2    2.7  2  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
       0.68    9.5   4.0       0.51    9.9   0.3    2.6  2  PF05443.6  ROS/MUCR transcriptional regulator protein
        1.2    8.8  18.4      0.085   12.5   3.3    3.1  3  PF06009.7  Laminin Domain II
        1.2    9.3   5.7       0.89    9.7   1.8    2.4  1  PF08066.7  PMC2NT (NUC016) domain
        1.4    8.7   7.2        1.8    8.3   1.0    3.2  3  PF06148.6  COG (conserved oligomeric Golgi) complex component, COG2
        1.5    8.0  15.5       0.51    9.6   4.5    2.3  2  PF00038.16 Intermediate filament protein
          2    7.5  11.5        0.2   10.7   4.9    1.6  1  PF11932.3  Protein of unknown function (DUF3450)
        2.3    7.1   6.2        3.5    6.5   4.3    1.3  1  PF13206.1  Trypanosomal VSG domain
        3.6    7.2  10.6          6    6.5   0.2    3.5  3  PF01920.15 Prefoldin subunit
        4.7    6.8  15.3        1.5    8.4   7.8    2.3  2  PF07926.7  TPR/MLP1/MLP2-like protein
          7    6.0  10.0        1.1    8.6   3.7    2.0  2  PF05335.8  Protein of unknown function (DUF745)
        8.6    6.2  14.6       0.49   10.3   4.7    2.4  2  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1


Domain annotation for each model (and alignments):
>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.6   1.0   2.6e-95   9.8e-93       1     358 [.      44     398 ..      44     399 .. 0.94

  Alignments for each domain:
  == domain 1    score: 310.6 bits;  conditional E-value: 2.6e-95
   PF10498.4   1 medLleKLklLnYekeflkkkklkplsryYFalestNpgeqFyyFtsLaaWLlkkag..kkveqpqefddpnatasnilqelkklglkvdfppakLksGsGeqvcyvLddLadaaLkkkkfkfkrpkyekeedeeeeveeddaeiileeveeeqeaeekeqdelldlnvlkkktkk.gdtsekeqakqvleskvdaeewklevervapqLkveiktdakdWrkhleqmkqlkkaieksleelkqsLkklsqdlskalekiekrEkqlnnqleelvqeykeareelsevqekynqlsksvsektaelseiseeleqvkqeleergsklsdgsplvkikqaitkLkeeikqldlrigvlqhtl 358
                 me++leKLk+L+Ye+ f+ k+++ pl r  Fal  +Np+ qF  F +L++WL++ a    ++ ++ +fddpn  +++++ +l++lg + dfp +kLk+G+Ge  c+vLd L+d+aL+ ++f+++ p +e + d +e  e d+a +i + +e++ e+ e+e++      + + +     ++ e+++a++++  ++da ewk e+erv p+Lk   +  +k+Wr h+eq+k ++k i++ l++++ +++++s +++ a+ek++++E+++nnq+e+  qey++ar e++ +++k+    ++v+e+t++++ i+e+l+++k ++ +r+++++d+spl++ikqa++ +k +++  +lrigv++htl
  MMETSP1325-20131115|1676_1  44 MENVLEKLKVLDYETTFCVKHHITPLARTSFALPAKNPSVQFKNFLDLVSWLCGEATgdPDTFTVDQFDDPNVSVNKMMLALRNLGFSLDFPVTKLKQGHGEPTCNVLDFLVDKALAARGFQWQPPLHEDAPDLDEA-EVDEAADIGDAIEDDIEDIEEEEAM-----FTEVAAPVaEAEVEDQAAREMITGTIDALEWKTELERVGPRLKLPDSLMSKEWRAHIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATDTSPLIQIKQALQGIKGDVNSFELRIGVVSHTL 398
                 9*****************************************************55425778889*************************************************************99987755444.779************9966666666.....33333333355677888999************************999999*********************************************************************************************************************************************98 PP

>> PF05911.6  Plant protein of unknown function (DUF869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   8.6   7.7e-07   0.00029     555     706 ..     248     420 ..     178     430 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 7.7e-07
   PF05911.6 555 slqdvsvekseikkeleilksseveissld..................evktaeekstleeletlklekeklevelskckedleesklklketekkleelkselkaaee...skslaetqlkcmeesyeslelrkkdlea.evkslqekikkledelekerqnhqeklakcrel 706
                 +l d s + +e + ++e +k++e++i+s+                   e   ++e+s ++++e ++ e e+  +e++ +++++ +++++++e  +++++++++l+++++   s++ ++t++  + +++++l+  k d+++ e +    + + ++++l+  + +h+ +++k  ++
  MMETSP1325-20131115|1676_1 248 KLPD-SLMSKEWRAHIEQTKEHEKRIQSTLptaqghmqsmsgqikdavEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDdmsSRENSATDTSPLIQIKQALQGIKGDVNSfELRIGVVSHTLMQAKLKSIKTKHRGNKSKDPDE 420
                 4566.778888888999999999999998899999999999999997777778888999*********************************************97774343888999999***********999999432444444455567777777778887777776554 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   5.3   1.8e-06   0.00069     275     406 ..     259     390 ..     180     425 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 1.8e-06
   PF13166.1 275 eahFdeefeelkekleellekleskieklleelesilse.ekensefkedveelkaelealeeeleklekaleeKlkdpfs.slelesiadeieeinelvdkinelirkhNekidnlkeeknkakkklwlhlva 406
                 +ah+++ ++e++++++++l + + ++++++ ++++ +++ +++++ ++++ e++++e+e  + e++++e+++++ ++++ + + +++si+++++e+++++++ +++ ++    i+  k+  + +k +++++++ 
  MMETSP1325-20131115|1676_1 259 RAHIEQ-TKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKmRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNElTNSMNSITEQLDELKDDMSSRENSATDTSPLIQI-KQALQGIKGDVNSFELR 390
                 455554.6777888888888888888888888888887656666778888888888888888888888888888888888855668888888888888888888887777776654.55566666666655554 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       9.8   3.7e+03     159     261 ..     197     214 ..     182     240 .. 0.47
   2 !   18.2   5.1   1.8e-06   0.00069     147     259 ..     262     363 ..     246     391 .. 0.61

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 9.8
   PF08317.6 159 eelkedeellnkklelinsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeia 261
                 e+                                                                                     ie+ +   +e+ + +a
  MMETSP1325-20131115|1676_1 197 ED-------------------------------------------------------------------------------------IEEEEAMFTEVAAPVA 214
                 22.....................................................................................2222222222222222 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 1.8e-06
   PF08317.6 147 leglkeeLeenleelkedeellnkklelinsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekksellee 259
                 +e  ke  ++  ++l + + +++    +i+++++k+r+k+++++++++s+r           +e e++r+e++  e+k+++ r +++el++ ++++++++++lk+++s  +++
  MMETSP1325-20131115|1676_1 262 IEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIR-----------QEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENS 363
                 344444444444445555555555555555555555555555555555554...........556666777777777777777777777777777777666666666654443 PP

>> PF09789.4  Uncharacterized coiled-coil protein (DUF2353)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   3.4   1.1e-05    0.0041      62     159 ..     282     384 ..     241     388 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.1e-05
   PF09789.4  62 kpeskrkalsqlleesreeNkqLstdveeLrqrlkelqeDikllRetiaklrvekkgvgar.eel....eeredlvkqlEklrekekqLesdlrslldekeev 159
                 +++s + ++ + +e++r + +++ +++e +rq ++ +++++k++  +++  r++ ++   + +++    +e +d ++  E++   +  L +  ++l+++k++v
  MMETSP1325-20131115|1676_1 282 HMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSmNSIteqlDELKDDMSSRENSATDTSPLIQIKQALQGIKGDV 384
                 345567789999***************************************9999886544144532224444455555888888888888889999999998 PP

>> PF04289.7  Protein of unknown function (DUF447)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.2   3.5e-05     0.013      70     153 ..     261     346 ..     247     366 .. 0.70

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.5e-05
                 GEEEETTEE.....EE----EEEEEEEEEE---EEEEEEEEE---EEEETT----B..----HHHHHHHHHHHCGGG....S-HHHHHHHH CS
   PF04289.7  70 dfeeelkplkkik.vlkdalawvefeveevegdserlvlelkpvkeeilrervkpf..nRadaaviEaaVlatRldi....ldkeklleei 153
                 + e+ +++ k+i+ +l +a+ ++     ++++  e ++ + + ++ ++++   +++   R+++ viE  V atR ++    +      + i
  MMETSP1325-20131115|1676_1 261 HIEQTKEHEKRIQsTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFES-IRQEYesARGEMKVIEDKVTATRTNVneltN----SMNSI 346
                 45555667777777888888888877777777777777777777777777.5566677*******************54332....33333 PP

>> PF06818.10  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   3.8   3.7e-05     0.014      16     117 ..     266     371 ..     258     428 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 3.7e-05
  PF06818.10  16 kqqLkesqaelaqkaseilsLraqlrearaelqesee....klqelkdalrtktleLevceneLqrkkseaellrekagrleaelaelrealasagtlkedcllls 117
                 k   k +q+ l +  + + s+ +q+++a  +++++e+    +++++++ +++   e+ v e+ +  ++ + + l + ++ + ++l el++ ++s  +  +d+  l 
  MMETSP1325-20131115|1676_1 266 KEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQsinnQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATDTSPLI 371
                 6677899********************9888888776222266778888999999************************************999855555444443 PP

>> PF05701.6  Plant protein of unknown function (DUF827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2  12.4   5.9e-05     0.022     207     333 ..     256     379 ..     175     418 .. 0.60

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.9e-05
   PF05701.6 207 eayekelkeaekelerlkedldpekdle.kLaeasaelesLqkeleeakeselesvasvtkELeeakanlekaaeeekslrslvesLkqeLeeekkeleelkekekeaeeavssLeaelsrtkselea 333
                 + +++ ++++++ ++r ++ l ++   +  ++++s ++++  ++++ +++s++++ +s+++E e a+ +++ +++ +++ r  v+ L++ ++   ++l+elk + +++e  + + +  l ++k+ l+ 
  MMETSP1325-20131115|1676_1 256 KEWRAHIEQTKEHEKRIQSTLPTA---QgHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATD-TSPLIQIKQALQG 379
                 445555555555555555555555...445555555555555555888888888888888888888888888888888888888888888888888888888888887766544.3345555555554 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   3.2    0.0003      0.11      40     123 ..     269     358 ..     256     373 .. 0.58
   2 ?    7.5   2.0    0.0077       2.9      30     103 ..     334     393 ..     322     408 .. 0.45

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.0003
   PF04513.7  40 ldaietqLnalsedlksllaeldtrldtlltnLtdalnalq......dtlrneLtnlnsiltnLlssvtNinstLnnllqalnnldlgal 123
                  + i+++L + + +++s++ +++++++++ ++ ++  n+++      ++ r e++ ++ ++t   ++v  + +++n++ + l+ l+ +  
  MMETSP1325-20131115|1676_1 269 EKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFEsirqeyESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMS 358
                 456777777777777776666666444443333333333333336666777777777777777777777777777777777777654433 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0077
   PF04513.7  30 vqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalq.....dtlrneLtnlnsiltnLlssvtN 103
                 +++ ++l++ +++                  ++++ld+l + +++  n+ +      +++++L++++ ++++    ++ 
  MMETSP1325-20131115|1676_1 334 TNV-NELTNSMNS------------------ITEQLDELKDDMSSRENSATdtsplIQIKQALQGIKGDVNSFELRIGV 393
                 222.333333333..................333444444444444444443333333555555555555555444444 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   5.2   6.9e-05     0.026      22     121 ..     271     365 ..     271     377 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 6.9e-05
                 HHHHCHCCCCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  22 riqdlldkyekdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLqevlrsneskiq 121
                 riq++l +++ +++    ++++ +e++  k ++i+++ +si +++++++ + k    ie++v+ + ++++   l ++++++ +q+++L++ ++s e+  +
  MMETSP1325-20131115|1676_1 271 RIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMK---VIEDKVTAT-RTNV-NELTNSMNSITEQLDELKDDMSSRENSAT 365
                 68999999999999999999999999999999999999999999999987744...888888888.8888.99999999999999999999999887655 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.2   0.00013      0.05      67     144 ..     289     366 ..     256     414 .. 0.52

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00013
   PF04582.7  67 dvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevdanstdisnlksdvsanglnitd 144
                 ++  ++++++++ ++++++ +++++  +s   e++ + + v+a  + + +l +++++ + ++ +lk d+s++  + td
  MMETSP1325-20131115|1676_1 289 QIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATD 366
                 333444444444444444444444444444444444444444444444444444444444444444444444433333 PP

>> PF09486.5  Bacterial type III secretion protein (HrpB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.2      0.52     2e+02      60     110 ..     183     235 ..     166     248 .. 0.67
   2 ?    7.9   0.2    0.0062       2.3       5      59 ..     257     311 ..     254     313 .. 0.91
   3 ?    9.4   0.1    0.0022      0.82      13      62 ..     297     346 ..     293     355 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.52
   PF09486.5  60 ddlagggasl..tidaylqlrryrdvlveelaaaeqavaaarqalqakvaela 110
                 d+ a  g ++  +i+++ + ++  + +++ +a ae + +aar  +    ++l+
  MMETSP1325-20131115|1676_1 183 DEAADIGDAIedDIEDIEEEEAMFTEVAAPVAEAEVEDQAAREMITGTIDALE 235
                 44444455552246677777777777777777777777777777777777765 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0062
   PF09486.5   5 aferllerkarrderlraelsalraalealdrelaecraaveakadrlaahdarl 59 
                  +++ +e+ +  ++r++  l  +++ ++++ ++++  +++++ k++ +++  +++
  MMETSP1325-20131115|1676_1 257 EWRAHIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESI 311
                 69999999999***********************************999876665 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.0022
   PF09486.5  13 karrderlraelsalraalealdrelaecraaveakadrlaahdarlddl 62 
                  + +++ ++++ + +r++ e++ +e++  +++v a ++++++  ++++ +
  MMETSP1325-20131115|1676_1 297 MRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSI 346
                 56678899*********************************999998765 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   5.5   0.00023     0.087      37     146 ..     266     375 ..     251     408 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00023
   PF10186.4  37 etlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklnslesltaekR 146
                 ++ +k+++++l  a+   +    q+k +v++ + + + i ++ e +++e e++r +++  ++++   r +++  ++  ++++eql++l+++++ +++  + ++ l++ k+
  MMETSP1325-20131115|1676_1 266 KEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATDTSPLIQIKQ 375
                 55678888888877777999999999999999999999999999999999999999999999999999999999999999999999999999999988777666666555 PP

>> PF05549.6  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.8   0.00058      0.22      50     162 ..     255     364 ..     252     372 .. 0.61
   2 ?    9.3   1.7    0.0015      0.55      73     157 ..     329     414 ..     322     425 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00058
   PF05549.6  50 sLeWLthish..dvdsiinklnpvsllsqttlLselrdalrtltklldklksvekklelsaetasdsk..llkklesietsleelhakldelsssetsesegPsssptkassaeaaa 162
                 s eW +hi++  + ++ i++  p++   ++++  +++da+++++++ ++++++ ++++++ e+a  +   + +k+++  t+++el + ++ ++++ ++ ++         ss+e++a
  MMETSP1325-20131115|1676_1 255 SKEWRAHIEQtkEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMkvIEDKVTATRTNVNELTNSMNSITEQLDELKDD-------MSSRENSA 364
                 679*****8622455666666666566677777899999999999999999999888887766543320133455555555555555555555554444443.......33333332 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0015
   PF05549.6  73 llsqttlLselrdalrtltklldklksvekklelsaetasd.skllkklesietsleelhakldelsssetsesegPsssptkass 157
                 ++++ t+++el ++++ +t++ld+lk+++++ e+sa+++s   ++ + l+ i+ ++++   ++ ++s++  +++ +  ++++  ++
  MMETSP1325-20131115|1676_1 329 VTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATDTSPlIQIKQALQGIKGDVNSFELRIGVVSHTLMQAKLKSIKTKHRGNK 414
                 56788999*******************999999887766652688899***************99999988877665555544333 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       7.1   2.7e+03      21      33 ..     190     202 ..     171     224 .. 0.64
   2 ?   10.6   4.2    0.0012      0.47      10      54 ..     319     360 ..     282     400 .. 0.76

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 7.1
   PF05531.7  21 dalqqqvddvqen 33 
                 da+++ ++d++e+
  MMETSP1325-20131115|1676_1 190 DAIEDDIEDIEEE 202
                 3444444444444 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0012
   PF05531.7  10 radikavddkVdalqqqvddvqenlpdvtelnekLdaqsaqLael 54 
                 r + k ++dkV+a  ++v+++++ ++    ++e+Ld++ + + + 
  MMETSP1325-20131115|1676_1 319 RGEMKVIEDKVTATRTNVNELTNSMNS---ITEQLDELKDDMSSR 360
                 445667777777777777777777776...557777777666655 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.4    0.0026         1      29      93 ..     266     326 ..     256     327 .. 0.87
   2 ?    5.2   0.1     0.048        18       4      62 ..     326     385 ..     323     414 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0026
  PF02050.11  29 eeyrqqlsgsmqglsaaelrnyqafisaldeaiaqqqqeleqaekqveqareewqeanqelkkle 93 
                  e++++++++     + +  + q++ +++++a+++ +++ +  ++q e  r+e+ +a+ e k +e
  MMETSP1325-20131115|1676_1 266 KEHEKRIQSTL----PTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIE 326
                 45566666666....788899***************************************99887 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.048
  PF02050.11   4 eraLaeaqqeleeaeekleelqqyreeyrqqlsgsm.qglsaaelrnyqafisaldeaia 62 
                 e +  + +++++e  + +++++++++e++  +s++  +  + + l + ++ ++ ++  + 
  MMETSP1325-20131115|1676_1 326 EDKVTATRTNVNELTNSMNSITEQLDELKDDMSSREnSATDTSPLIQIKQALQGIKGDVN 385
                 556677788888888888888888888888888887446666666666666665555444 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       5.3     2e+03      49      60 ..     190     201 ..     171     211 .. 0.69
   2 ?    5.2   0.4     0.064        24       7      67 ..     269     327 ..     254     331 .. 0.76
   3 ?   12.2   3.5   0.00042      0.16       8      68 ..     302     363 ..     284     368 .. 0.68
   4 ?    1.3   0.0       1.1   4.1e+02      43      69 ..     372     398 ..     363     413 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 5.3
   PF09177.6  49 esiewdledLee 60 
                 ++ie d+ed+ee
  MMETSP1325-20131115|1676_1 190 DAIEDDIEDIEE 201
                 456777777766 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.064
   PF09177.6   7 keevqksidkleslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvvek 67 
                 ++ +q+++ +++  ++s++   +d    +++ ++++ ++n++esi++++e    +++v+e+
  MMETSP1325-20131115|1676_1 269 EKRIQSTLPTAQGHMQSMSGQIKDAV--EKMRSKEQSINNQFESIRQEYESARGEMKVIED 327
                 45667777777777777777666655..788888999999999999988887777777775 PP

  == domain 3    score: 12.2 bits;  conditional E-value: 0.00042
   PF09177.6   8 eevqksidkleslyrsweelrsdst...........sskelkeltkeLenalesiewdledLeeavsvvekn 68 
                 ++++++ +++++ y          +           + +      +eL+n+++si+++l++L++ +s  e++
  MMETSP1325-20131115|1676_1 302 QSINNQFESIRQEY----------EsargemkviedKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENS 363
                 33444444444444..........3444444455567777778889******************99986665 PP

  == domain 4    score: 1.3 bits;  conditional E-value: 1.1
   PF09177.6  43 eLenalesiewdledLeeavsvveknp 69 
                 ++++al+ i+ d++ +e  + vv++  
  MMETSP1325-20131115|1676_1 372 QIKQALQGIKGDVNSFELRIGVVSHTL 398
                 6899****************9999875 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       9.1   3.5e+03      11      35 ..     187     211 ..     182     224 .. 0.69
   2 ?   14.1   5.0   8.1e-05     0.031       3     101 ..     262     361 ..     260     369 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 9.1
   PF13863.1  11 evqlaldakreeierkeeelkeree 35 
                 ++  a++   e+ie+ e+++ e  +
  MMETSP1325-20131115|1676_1 187 DIGDAIEDDIEDIEEEEAMFTEVAA 211
                 5556777777788887777777655 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 8.1e-05
   PF13863.1   3 lekkrem.eevqlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekle 101
                 +e+++e+ + +q +l + + +++  + ++k   e+++ k++ ++ +++ + +  +++  + +  e k+ + + +  e+++ ++++++ql+elk +++  e
  MMETSP1325-20131115|1676_1 262 IEQTKEHeKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRE 361
                 56666651569**********************************************************************************9988665 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.2      0.95   3.6e+02      75     101 ..     180     206 ..     175     218 .. 0.79
   2 ?   -2.1   0.0       7.5   2.9e+03      60      78 ..     221     239 ..     207     242 .. 0.80
   3 ?   11.1   1.4    0.0006      0.23      58     125 ..     261     328 ..     254     329 .. 0.85
   4 ?    6.5   0.7     0.017       6.3      58     113 ..     338     392 ..     328     410 .. 0.52

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.95
   PF07889.7  75 dkldeqkeiskeikeevteiredlsai 101
                  ++de ++i + i++++ +i+e+ + +
  MMETSP1325-20131115|1676_1 180 AEVDEAADIGDAIEDDIEDIEEEEAMF 206
                 478999999999999999998876554 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 7.5
   PF07889.7  60 asakkhLsqridnlddkld 78 
                 ++a+  +++ id l++k +
  MMETSP1325-20131115|1676_1 221 QAAREMITGTIDALEWKTE 239
                 4688889999999999876 PP

  == domain 3    score: 11.1 bits;  conditional E-value: 0.0006
   PF07889.7  58 avasakkhLsqrid.nlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLeskleslesk 125
                 +++++k h  +ri+ +l +   + + +s +ik+ v ++r++ ++i+++++s++q  e+ ++ ++ +e k
  MMETSP1325-20131115|1676_1 261 HIEQTKEH-EKRIQsTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDK 328
                 56777766.56666257777788999***********************************99999986 PP

  == domain 4    score: 6.5 bits;  conditional E-value: 0.017
   PF07889.7  58 avasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvve 113
                 +++++   +++++d+l d +   ++ + ++ + + +i++ l+ ik dv+s++  + 
  MMETSP1325-20131115|1676_1 338 ELTNSMNSITEQLDELKDDMSSRENSATDT-SPLIQIKQALQGIKGDVNSFELRIG 392
                 344444555666666666665555544444.3455666666666666666654433 PP

>> PF00669.15  Bacterial flagellin N-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   1.5     0.012       4.5      56     118 ..     261     321 ..     252     338 .. 0.72
   2 ?    7.4   2.0    0.0085       3.2      56     120 ..     321     385 ..     309     388 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.012
  PF00669.15  56 glsqlsrnnslgisrlqtaqgaleelkdalqrlkelavqaandstssadrasaqaelqqlise 118
                  ++q ++  + ++s l taqg +++++  +++  e++ +++++ +++    s+++e ++ ++e
  MMETSP1325-20131115|1676_1 261 HIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQ--FESIRQEYESARGE 321
                 578999999999********************888877777776653..34444444444444 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0085
  PF00669.15  56 glsqlsrnnslgisrlqtaqgaleelkdalqrlkelavqaandstssadrasaqaelqqliseln 120
                  ++ ++++ + +   ++   + ++++++ l++lk+ + +++n+ t+++   +++++lq+  + +n
  MMETSP1325-20131115|1676_1 321 EMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATDTSPLIQIKQALQGIKGDVN 385
                 566666777777777777778999**********************************9999888 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   7.9    0.0034       1.3      76     185 ..     269     378 ..     177     387 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0034
   PF04156.9  76 e....srlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqeklaelq 185
                 e    s+l+  +   +s+  ++ + +e+++++ ++   ++e++++++e++++e k  e+++ + + ++ el+ ++  +     ++ +e+++  s  e +++d++ l +  + lq
  MMETSP1325-20131115|1676_1 269 EkriqSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSIT----EQLDELKDDMSSRENSATDTSPLIQIKQALQ 378
                 1223344444444445555555566666777777777888888888888888888888888888888888888877777....4444444444444444555555555554444 PP

>> PF07303.8  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.0     0.055        21      18      92 ..     263     332 ..     253     338 .. 0.67
   2 ?    8.1   0.1      0.01       3.8      25      93 ..     337     407 ..     326     411 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.055
   PF07303.8  18 dsdykeYkeLqaeldeiskklaeldaelkslke.gseeykevakileeyeklkkrspdykekkerckyLknKLshi 92 
                 ++  ++ k++q+ l +++ ++++++ ++k++ e  ++++++++   +++e +++   +y++ + ++k + +K +  
  MMETSP1325-20131115|1676_1 263 EQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEkMRSKEQSIN---NQFESIRQ---EYESARGEMKVIEDKVTAT 332
                 5555566888999999999999999999776653555566666...77777754...6777777777777776655 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.01
   PF07303.8  25 keLqaeldeiskklaeldaelkslkegseeykevakileeyeklk..krspdykekkerckyLknKLshiK 93 
                  eL++ +++i+++l+el+++++s +++ ++ + + +i +  + +k   +s + +        +++KL+ iK
  MMETSP1325-20131115|1676_1 337 NELTNSMNSITEQLDELKDDMSSRENSATDTSPLIQIKQALQGIKgdVNSFELRIGVVSHTLMQAKLKSIK 407
                 68999******************999999998888899999999843333344444445555666777766 PP

>> PF06013.7  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.0    0.0083       3.2      12      79 ..     261     327 ..     255     332 .. 0.60
   2 ?   12.7   2.4   0.00023     0.086       8      85 ..     282     361 ..     275     362 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0083
   PF06013.7  12 aakrfqkaaeelesilqrlkaqidalqsgWsGaaadafqaafeewkqaaeklveaLeeisealkqaae 79 
                 ++ + ++++++++s+l + ++++++++++ +  a ++ ++  + +++++e + +++e+ + ++k + +
  MMETSP1325-20131115|1676_1 261 HIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKD-AVEKMRSKEQSINNQFESIRQEYESARGEMKVIED 327
                 55566666666666666666666666666653.36666666666666666666666666666665555 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 0.00023
   PF06013.7   8 elrqaakrfqkaaeelesilqrlkaqidalqsgWsGaaad..afqaafeewkqaaeklveaLeeisealkqaaekyedaD 85 
                 +++++++++++a e ++s+ q++++q ++++++++ a ++    ++  +  + ++++l + +++i+e+l++ ++ + + +
  MMETSP1325-20131115|1676_1 282 HMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEmkVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRE 361
                 799*******************************977664224677778999999*****************99999887 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1     0.034        13      24      71 ..     265     312 ..     256     320 .. 0.81
   2 ?    8.0   1.2     0.006       2.3      28      64 ..     322     358 ..     312     376 .. 0.56

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.034
   PF06103.6  24 lkktldevnktvkkltkqvdgitketeellaktnelleDvneKvetld 71 
                 +k+  +++++t+ + + +++  + ++++ ++k ++  + +n++ e++ 
  MMETSP1325-20131115|1676_1 265 TKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIR 312
                 455567888999999999999999999999999999999999988875 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.006
   PF06103.6  28 ldevnktvkkltkqvdgitketeellaktnelleDvn 64 
                 ++ +++ v+  +++v+++t+ ++ ++++ +el +D++
  MMETSP1325-20131115|1676_1 322 MKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMS 358
                 3344444444444445555555555555555554444 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.7       0.1        39     104     156 ..     248     300 ..     232     303 .. 0.88
   2 ?    8.8   5.2    0.0025      0.94      74     141 ..     294     359 ..     290     415 .. 0.87

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.1
   PF07106.8 104 kLtseltteelleeiqelkkeveeieekLeslkeankevtkeeiekvkkeykk 156
                 kL  +l  +e + +i++ k++ ++i++ L   + +++ ++ + +++v+k++ k
  MMETSP1325-20131115|1676_1 248 KLPDSLMSKEWRAHIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSK 300
                 577889999999******************99999999999999999998876 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0025
   PF07106.8  74 lnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeanke 141
                 ++k+  + + ++++ +++ qe+++++ e+k ++ +      +++++el ++++ i e+L++lk+++  
  MMETSP1325-20131115|1676_1 294 VEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKV--TATRTNVNELTNSMNSITEQLDELKDDMSS 359
                 678888999999999999999999999999999999..456899999999999999999999987655 PP

>> PF05443.6  ROS/MUCR transcriptional regulator protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       2.1   8.1e+02      16      41 ..     211     241 ..     202     315 .. 0.54
   2 ?    9.9   0.3    0.0013      0.51      11      69 ..     322     378 ..     312     388 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 2.1
   PF05443.6  16 ayvsnnsvsaeelpalikevhaaLk.....s 41 
                 a v++ +v+ +   ++i+ + +aL+     +
  MMETSP1325-20131115|1676_1 211 APVAEAEVEDQAAREMITGTIDALEwktelE 241
                 5555555555555566665555555333220 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0013
   PF05443.6  11 aeivsayvsnnsvsaeelpalikevhaaLkslskkaeaeaeaaeaekakPavsikksvt 69 
                 +++++  v+ ++ + +el++ ++++ ++L +l+ + +    +++a+ ++P ++ik++++
  MMETSP1325-20131115|1676_1 322 MKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSR--ENSATDTSPLIQIKQALQ 378
                 5678888999999*********************76643..4467899********986 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.7    0.0028       1.1      23      74 ..     259     310 ..     254     313 .. 0.88
   2 ?   12.5   3.3   0.00022     0.085      19      98 ..     301     381 ..     298     386 .. 0.81
   3 ?   -1.9   0.1       6.2   2.3e+03      72      88 ..     400     416 ..     395     417 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0028
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7  23 stnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldk 74 
                  + +e+tk+  +++++++   + +++s++ +++da +++r  e+ ++  ++ 
  MMETSP1325-20131115|1676_1 259 RAHIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFES 310
                 67899************************************99999876665 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 0.00022
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXX CS
   PF06009.7  19 legistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkLkklkkleeasqsrv.lsrniseik 98 
                  + i+++ e +++++++ +g+++ +++kv ++ + v++  +s+  +++++++l d +++ ++  +  +    +++ ++ ik
  MMETSP1325-20131115|1676_1 301 EQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATDTSPLIqIKQALQGIK 381
                 578999***************999999999999999999999999999999998888877777777665556777777777 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 6.2
                 XXXXXXXXXXXXX.... CS
   PF06009.7  72 ldkLkklkkleeasqsr 88 
                  +kLk++k++  +++s+
  MMETSP1325-20131115|1676_1 400 QAKLKSIKTKHRGNKSK 416
                 57999999999998876 PP

>> PF08066.7  PMC2NT (NUC016) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.8    0.0023      0.89      25      89 ..     292     358 ..     283     360 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0023
   PF08066.7  25 efsksldeqserLlslinkllksaasksrikkrk..deesvedqwkavvdvlDsllEkvdtllDelk 89 
                 +  ++++++++++ +  +++ +  +s + + k    +++ ++++ +++ +++ s+ E+ d l D ++
  MMETSP1325-20131115|1676_1 292 DAVEKMRSKEQSINNQFESIRQEYESARGEMKVIedKVTATRTNVNELTNSMNSITEQLDELKDDMS 358
                 667899****************999999999999788888999*****************9988765 PP

>> PF06148.6  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         7   2.7e+03      11      36 ..     104     126 ..      67     133 .. 0.67
   2 ?    3.2   0.3      0.17        64      74     103 ..     279     308 ..     247     319 .. 0.54
   3 ?    8.3   1.0    0.0046       1.8      62     111 ..     306     355 ..     302     378 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 7
   PF06148.6  11 pdFdpdqFvselrkgvpLeslrrdLr 36 
                 ++F +dqF    +  v++++++  Lr
  MMETSP1325-20131115|1676_1 104 DTFTVDQF---DDPNVSVNKMMLALR 126
                 67777777...566666666666666 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.17
   PF06148.6  74 lesplaaarkkvesvrsklseveeeveski 103
                  ++ ++++  +++++++k+ + e+ ++++ 
  MMETSP1325-20131115|1676_1 279 AQGHMQSMSGQIKDAVEKMRSKEQSINNQF 308
                 333333333333333333333333333333 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0046
   PF06148.6  62 gsLvglqeeleelesplaaarkkvesvrsklseveeeveskikekkdlee 111
                 ++  ++++e e  +++++ + +kv+++r +++e  + ++s  ++  +l++
  MMETSP1325-20131115|1676_1 306 NQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKD 355
                 56678889999999999999999999999999988888777777776665 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   5.3     0.088        33     212     279 ..     256     323 ..     187     327 .. 0.84
   2 ?    9.6   4.5    0.0013      0.51     186     254 ..     297     365 ..     293     404 .. 0.63

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.088
  PF00038.16 212 rsakeeitelrrqiqsleieleslkkqkeslerqlaeleerleeelkklqekiseleeelqelkeema 279
                 ++ +  i++++ + ++ ++ l   +++ +s+  q++++ e++ ++ ++++++ +++ +e ++++ em+
  MMETSP1325-20131115|1676_1 256 KEWRAHIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMK 323
                 45566677777777777777888888888888888888888888888888888888888888888875 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0013
  PF00038.16 186 reeaeewykakleelqeeaeknsealrsakeeitelrrqiqsleieleslkkqkeslerqlaeleerle 254
                 +++ e+  ++++e++++e e+   +++  +  +t +r+++++l+  ++s+ +q + l++ ++  e++  
  MMETSP1325-20131115|1676_1 297 MRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSAT 365
                 445566666666777777666666666666666666666666666666666666666666655554433 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.9   0.00052       0.2      23     107 ..     286     370 ..     260     384 .. 0.63

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00052
   PF11932.3  23 sldqaqeaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieetrqeivPl 107
                    q+++a +k+  ++++  ++ +++ ++ +++  e++ ++++v  +++  ++l++ +++  ++l++l++++ + e+  ++++Pl
  MMETSP1325-20131115|1676_1 286 MSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSATDTSPL 370
                 3335566666666666666666666666666666666666666666666666666666666666666666666666666666665 PP

>> PF13206.1  Trypanosomal VSG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.3    0.0092       3.5      49     170 ..     237     388 ..     180     414 .. 0.68

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0092
   PF13206.1  49 tkdaeeil...alnlsvadaewlkkfdeetddetwgekkkkkak.......akWkaaakalkkkake.........keekkssnsslstaakqkak.....................qlaekAaklkeeiektrtkalaassaekkllkAlyGdakepeene 170
                 ++++e+++   +l  s+ ++ew+++++++++ e+  +++  +a+        + k+a ++++ k+++         +         + + a+ ++k                     ++ e+  +lk+++ +  + a+ +s    ++++Al G ++++ + e
  MMETSP1325-20131115|1676_1 237 KTELERVGprlKLPDSLMSKEWRAHIEQTKEHEKRIQSTLPTAQghmqsmsGQIKDAVEKMRSKEQSinnqfesirQ---------EYESARGEMKviedkvtatrtnvneltnsmnSITEQLDELKDDMSSRENSATDTS-PLIQIKQALQGIKGDVNSFE 388
                 33333333666666688889999999999998888877777666688888866666666666655542333333330.........2233333333334444444444445555777999999999999999999999998.77779999999888877665 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       5.3     2e+03      36      48 ..     194     206 ..     181     235 .. 0.65
   2 ?    6.2   0.2      0.02       7.7      58     100 ..     274     316 ..     272     321 .. 0.83
   3 ?    6.5   0.2     0.016         6      68     101 ..     326     359 ..     323     364 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 5.3
                 HHHCTS-TT-EEE CS
  PF01920.15  36 eelelldedtkvy 48 
                 + +e+++e++ ++
  MMETSP1325-20131115|1676_1 194 DDIEDIEEEEAMF 206
                 3344444444333 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.02
                 EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  58 qdkeevkeeLeerketlekeiktlekqleklekeleelkeely 100
                  ++++++ + + +  +++  +++++++++++++++e++++e  
  MMETSP1325-20131115|1676_1 274 STLPTAQGHMQSMSGQIKDAVEKMRSKEQSINNQFESIRQEYE 316
                 5778888888888889999999999999999999999998875 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF01920.15  68 eerketlekeiktlekqleklekeleelkeelyk 101
                 e++     +++++l++++ ++ ++l+elk+ + +
  MMETSP1325-20131115|1676_1 326 EDKVTATRTNVNELTNSMNSITEQLDELKDDMSS 359
                 66777888999******************98876 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       8.9   3.4e+03      25      40 ..     191     206 ..     180     235 .. 0.62
   2 ?    8.4   7.8    0.0039       1.5      10     113 ..     260     360 ..     254     410 .. 0.63

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 8.9
   PF07926.7  25 qiqklkdDlenqaeia 40 
                 +i+  ++D+e++  + 
  MMETSP1325-20131115|1676_1 191 AIEDDIEDIEEEEAMF 206
                 4444444444444433 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0039
   PF07926.7  10 eelkrlesqiaaieeqiqklkdDlenqaeiareaqdkYerelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevelselekk 113
                 + ++++++ +++i++++ +++  +++++ +++ a +k      k  +  ++ +++++e+++++ e++ +++++ +++ ++nel +++++  ++L++ ++++ ++
  MMETSP1325-20131115|1676_1 260 AHIEQTKEHEKRIQSTLPTAQGHMQSMSGQIKDAVEKMR---SKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSR 360
                 555555555555555555555555555555555555522...33344445555555555555555555555555555555555555554444444444443333 PP

>> PF05335.8  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       5.4     2e+03      76     104 ..     199     227 ..     188     240 .. 0.70
   2 ?    8.6   3.7    0.0029       1.1      84     175 ..     266     358 ..     252     379 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 5.4
   PF05335.8  76 vreaeavveeeskslqaaeanakaaakaa 104
                 ++e ea+ +e+   +++ae   +aa+++ 
  MMETSP1325-20131115|1676_1 199 IEEEEAMFTEVAAPVAEAEVEDQAAREMI 227
                 56667777777777777777777777655 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0029
   PF05335.8  84 eeeskslqaaeanakaaaka.akqaqkqlktlkallkeaqenleniekvaseaqqelaektqLleaAkkrvevlerqlkearkDyektkkaAk 175
                 +e +k +q++  +a+  +++   q ++ ++ +++  + ++++ e+i++ +++a  e++  ++ + a ++ v++l++ +++  + +++ k+   
  MMETSP1325-20131115|1676_1 266 KEHEKRIQSTLPTAQGHMQSmSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMS 358
                 566677777777777655541458888999999999999*******************99999********9999999999999988887655 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   1.0       3.1   1.2e+03      19      48 ..     189     217 ..     179     273 .. 0.72
   2 ?   10.3   4.7    0.0013      0.49      17      97 ..     285     365 ..     268     380 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 3.1
   PF10473.4  19 adlLkdkvenLErELelseenqelvileae 48 
                  d+++d +e +E E  +  e     ++eae
  MMETSP1325-20131115|1676_1 189 GDAIEDDIEDIEEEEAMFTEVA-APVAEAE 217
                 5889999999999977776653.3344444 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.0013
   PF10473.4  17 readlLkdkvenLErELelseenqelvileaenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervs 97 
                 + + ++kd ve++ +  ++ +++ e +  e e ++ e++ ++ k+ ++ +++++L   + s++++ ++L  ++  + + + 
  MMETSP1325-20131115|1676_1 285 SMSGQIKDAVEKMRSKEQSINNQFESIRQEYESARGEMKVIEDKVTATRTNVNELTNSMNSITEQLDELKDDMSSRENSAT 365
                 556678999999988888888888899999999999999999999999999999999999999999999988887776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1258  (0.0920129); expected 273.4 (0.02)
Passed bias filter:                      545  (0.0398625); expected 273.4 (0.02)
Passed Vit filter:                       127  (0.00928906); expected 13.7 (0.001)
Passed Fwd filter:                        48  (0.00351083); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              36  [number of targets reported over threshold]
# CPU time: 1.41u 0.36s 00:00:01.77 Elapsed: 00:00:00.70
# Mc/sec: 1478.89
//
Query:       MMETSP1325-20131115|1682_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   12.5   0.0       0.29   10.6   0.0    1.8  2  PF07366.7 SnoaL-like polyketide cyclase


Domain annotation for each model (and alignments):
>> PF07366.7  SnoaL-like polyketide cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   2.1e-05      0.29      35      80 ..     141     186 ..     128     189 .. 0.89
   2 ?   -1.6   0.0      0.12   1.7e+03      34      54 ..     222     242 ..     207     243 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 2.1e-05
   PF07366.7  35 eparGlegfrafveelfkafPDlkvevedlvaegdkvaarltftGt 80 
                 +  +Gl ++  +v+++++  P+ + +++++v eg ++ +++t++ t
  MMETSP1325-20131115|1682_1 141 GAVKGLINYQSMVTQTRHSWPNDTANIKQQVKEGAWAHCQATYDVT 186
                 66789999******************************99998766 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.12
   PF07366.7  34 eeparGlegfrafveelfkaf 54 
                 ++ ar+++++++++++ +  f
  MMETSP1325-20131115|1682_1 222 QGAARSPSAYMEQAASAMYLF 242
                 4889999**999998877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.33s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 1310.01
//
Query:       MMETSP1325-20131115|1672_1  [L=625]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-15   57.0   0.9      6e-15   55.2   0.6    1.9  1  PF00753.22 Metallo-beta-lactamase superfamily
  ------ inclusion threshold ------
        6.5    5.7   7.7         10    5.0   5.4    1.3  1  PF11593.3  Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF00753.22  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.6   8.8e-19     6e-15       7     177 ..      72     259 ..      66     276 .. 0.84

  Alignments for each domain:
  == domain 1    score: 55.2 bits;  conditional E-value: 8.8e-19
                 EEEEEECSSEEEEES--SCHHHHHHHHHHHHHSHGGGEEEEE.ESSSSTTTH--HHHHHHHCTEEEEEEHHHHHHHHTHHHHHHHHHHH......................CSEEEEEEEEECEEEEEEEEEEEEEEEETTCCSSTEEEEEETTTTEEEETTTSSSTTSSSSSBGHHHHCCCCSEETCHHHHHH CS
  PF00753.22   7 nsyLvegdggaiLiDtGlgteaalalllallglgpkdvdavi.lTHaHaDHiGGlpglleafpapvvygaeearallrlalrdelkrkk......................pvrvllvdvdeevgdgilggrrllfvtghpghgpghgvvylgggkilftGDllfvagtgrlgldltlrgakvrdpslweklld 177
                 ++y + g +++++iDtG gt++ +  l  +++++ + + +++ +TH H+DH+G ++++l   +   v++ae  +++   +l  +   +k                        r+l ++ +++ +d +     +l+++++pgh+ ++++++++ +k lf+GDll++ + ++l +   l++a++ + s+++k ++
  MMETSP1325-20131115|1672_1  72 FMYAILGADKCVVIDTGVGTGGLKKVL--DAKVNTEHLPYLViCTHVHFDHVGNNYEFLVGDDGSAVAAAES-PPYAAPCLCMGNRDPKttnnydlfslgmahgvtvkpfkVTRWLEDGATVTLDDANPSKYNELVILHTPGHSIDSISIWFAREKRLFVGDLLYPYTAISLSA---LGSAPQDYTSSLRKVIA 259
                 689999********************8..99999999999888***************96555555555555.555555665666666679**************999998888888888888888888888899***********************************9999...88888888888777765 PP

>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   5.4    0.0015        10     139     238 ..     274     388 ..     260     463 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0015
   PF11593.3 139 naattsstanTpaa..asvkkansasaPnatagvGsaattaaisattattptttakkprkprqtkkaaaaakkqasaqaqaqasaynqn.............sslnvsqnasmqa 238
                  + tt+++++  a   a       a++P+ + +  sa++t+a+ +   ++  ++a   +  r+   aaaa++k a  +    a+  nq              ++l+++++ +m+a
  MMETSP1325-20131115|1672_1 274 AGHTTGTATEAGAGagAAADDDAGAAEPHEAPSSASASATPATATEGVAAGEAAADVAGSWRERLEAAAAPVKAAYQERTCRAKSTNQDalaernaglvaafEALGIPHEVAMEA 388
                 3455655555433323333334456668887777888999988888888888888888888888889999999988888888888777788888899999997777777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.92u 0.42s 00:00:01.34 Elapsed: 00:00:00.64
# Mc/sec: 2340.19
//
Query:       MMETSP1325-20131115|1683_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-12   46.8  63.5    2.5e-05   24.2   4.7    5.6  5  PF07974.8  EGF-like domain
     0.0039   16.9   8.5     0.0039   16.9   5.9    4.3  4  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   7.4   0.00064       4.4       1      24 [.      22      41 ..      22      55 .. 0.85
   2 !   24.2   4.7   3.6e-09   2.5e-05       7      32 .]      81     106 ..      76     106 .. 0.93
   3 !   10.6   1.6   6.5e-05      0.44       1      16 [.     111     123 ..     111     126 .. 0.80
   4 !    9.5   0.6   0.00014      0.97      21      32 .]     147     158 ..     140     158 .. 0.94
   5 !   20.0   7.5   7.3e-08    0.0005       6      32 .]     179     205 ..     174     205 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00064
   PF07974.8  1 CsadgliCgghGtCvkqcgkCvCd 24
                C++    C+ghG+C  +  kC C+
  MMETSP1325-20131115|1683_1 22 CPNG---CSGHGSCGAN-DKCTCY 41
                9974...********97.58***6 PP

  == domain 2    score: 24.2 bits;  conditional E-value: 3.6e-09
   PF07974.8   7 iCgghGtCvkqcgkCvCdsgyqGktC 32 
                 +C++ GtC++ +g C+C ++y G  C
  MMETSP1325-20131115|1683_1  81 ECSNKGTCNRKTGECDCFDNYDGIAC 106
                 5********99*************99 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 6.5e-05
   PF07974.8   1 CsadgliCgghGtCvk 16 
                 C+    +C++hG+C++
  MMETSP1325-20131115|1683_1 111 CPG---DCSNHGFCYT 123
                 884...4*******94 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.00014
   PF07974.8  21 CvCdsgyqGktC 32 
                 CvCd gy G++C
  MMETSP1325-20131115|1683_1 147 CVCDLGYRGPDC 158
                 ************ PP

  == domain 5    score: 20.0 bits;  conditional E-value: 7.3e-08
   PF07974.8   6 liCgghGtCvkq.cgkCvCdsgyqGktC 32 
                  +C+g+G+C+    g C+C  gy+G +C
  MMETSP1325-20131115|1683_1 179 RDCSGRGICD-YgSGLCKCFTGYFGTKC 205
                 57********.669************** PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.1   5.3         2   1.4e+04       3      23 ..      26      41 ..      21      60 .. 0.67
   2 !   16.9   5.9   5.7e-07    0.0039       3      33 ..      82     108 ..      79     112 .. 0.89
   3 !    4.5   5.0    0.0042        29       3      38 ..     111     167 ..     109     181 .. 0.74
   4 !   12.6   3.1   1.3e-05     0.088       3      32 ..     181     206 ..     179     207 .. 0.90

  Alignments for each domain:
  == domain 1    score: -6.1 bits;  conditional E-value: 2
                STT-B-CC--B-S----BSBS CS
  PF00053.19  3 CnphgsssssCdsstgqClCk 23
                C++hg    sC   + +C C 
  MMETSP1325-20131115|1683_1 26 CSGHG----SCGA-NDKCTCY 41
                55555....6655.5566664 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 5.7e-07
                 STT-B-CC--B-S----BSBSTTEE---S-E CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenveGrkCdr 33 
                 C+++g    +C+++tg+C+C +n++G  C+r
  MMETSP1325-20131115|1683_1  82 CSNKG----TCNRKTGECDCFDNYDGIACER 108
                 66665....********************97 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.0042
                 STT-B-CC--B-S...................----BSBSTTEE---S..-EE---- CS
  PF00053.19   3 CnphgsssssCds...................stgqClCkenveGrkC..drCkpgy 38 
                 C++  s+++ C+                    +++ C C  ++ G++C  ++C +g 
  MMETSP1325-20131115|1683_1 111 CPGDCSNHGFCYTekqlaadadktydtpwdamKHVGCVCDLGYRGPDCslQECPSGV 167
                 555555555777777788888888888888888999************444787775 PP

  == domain 4    score: 12.6 bits;  conditional E-value: 1.3e-05
                 STT-B-CC--B-S----BSBSTTEE---S- CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenveGrkCd 32 
                 C+++g     Cd  +g C+C  ++ G+kC+
  MMETSP1325-20131115|1683_1 181 CSGRG----ICDYGSGLCKCFTGYFGTKCQ 206
                 77777....9*******************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       503  (0.0367905); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.44s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|1685_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-11   43.0   0.0    2.2e-11   42.8   0.0    1.1  1  PF00330.15 Aconitase family (aconitate hydratase)


Domain annotation for each model (and alignments):
>> PF00330.15  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.0   1.6e-15   2.2e-11     379     465 .]       3      84 ..       1      84 [. 0.90

  Alignments for each domain:
  == domain 1    score: 42.8 bits;  conditional E-value: 1.6e-15
                 B----HHHHHHHHH---HHHHHH----B--S--------B---SS-----EEEEESSS-------SS-TTEEEE--HHHHHHHHH-- CS
  PF00330.15 379 vvPGSevvkatleregldkifkeaGfellengCstCigqndrpDqlkeeketivsssNRNFegRqdanvrthflaSPalvaAaaiaG 465
                 v+P  ++ +a+l  eg+  i+  +G++   +gCs C+g++ r      +k t+vs+s RNF  R ++ +    laS +l+a aai+G
  MMETSP1325-20131115|1685_1   3 VAPPTKMDEAQLTSEGYYAIYGRVGARTEMPGCSLCMGNQARVA----DKSTVVSTSTRNFPNRLGKGADVY-LASAELAAVAAIMG 84 
                 889999999******************************94333....35779*************999887.************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 553.34
//
Query:       MMETSP1325-20131115|1680_1  [L=443]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.8e-56  190.5  36.9    6.7e-56  189.3  25.6    1.5  1  PF04515.7 Plasma-membrane choline transporter


Domain annotation for each model (and alignments):
>> PF04515.7  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.3  25.6   4.9e-60   6.7e-56       2     333 ..      13     316 ..      12     317 .. 0.89

  Alignments for each domain:
  == domain 1    score: 189.3 bits;  conditional E-value: 4.9e-60
   PF04515.7   2 vaiiltilalvlllliiflrk.RirlaiallkeaskavskvpslvlvpiltfvlllafivlwivvavalytsgepkeknsskstsegessgvevkldkklilllvyllfgllWtsevikavsqvtiagvvaswYfagkkrdvpkfpvlasfkraltyslGSiafGSLivaiiqliRilleylneklkeaenklvkfllcclkcclwclekfvkflNrnAYvmiaiyGksFctsAkdafellkrng.lralvldkltdfvlflgkllvsaltgllaylllkktkpkedlnyyavpvilvfiiayliasvffsvyesavdtlfvcfaedpelernd 333
                 ++ +++++ l+l+++ + ++k Ri++a+a l++a++a+  ++s+++v il+++l+l+++     va+a  ++g +++                    +  +++++++l++++W   +  +vs+vtiag+v+sw+f+  ++   + +v++sf+ra+t s+GSiafGSL+vai+++++++++ +++++++       ++ cc+ c+++c+e +v+++Nr+A+v++++yG+ Fc + +++f l+ ++g ++++++d+l++  l+ g+l+v+++++++ + +++   +++     +v++ + f+ ++++a v  + + sav t++v+fae +   +n+
  MMETSP1325-20131115|1680_1  13 FTALFCVFILMLIWCSWRAIKaRIPFAAANLSTACTALNAHKSVMCVVILMLILSLVWSF---TVALA--ANGMFDGV------------------GQVSGMVVFLVLVAYYWGGMICANVSHVTIAGTVGSWWFSPPEDASASYAVTSSFRRAMTSSFGSIAFGSLLVAILEAMKQMCREAQRQNNS-------MIACCATCIIGCIEGLVRYINRYAFVYVGLYGHDFCAAGSHVFGLFNHRGwIDTILNDDLIGNALNYGALMVGLVCAVAGLAVANIVFTDPTNVLVYVMTGYGFVTGFVMACVTANSVYSAVATVYVAFAESHVALQNN 316
                 5667888888888888866545****************************9999965543...44433..33333332..................2367899999*********************************99999*****************************************888.......89*********************************************96549**************************99999775444888888889999*******************************9888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       923  (0.0675102); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.41s 00:00:01.17 Elapsed: 00:00:00.79
# Mc/sec: 1343.78
//
Query:       MMETSP1325-20131115|1681_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00082   18.8   0.2    0.00098   18.5   0.2    1.2  1  PF03066.10 Nucleoplasmin
  ------ inclusion threshold ------
      0.035   13.9   3.2      0.043   13.6   2.2    1.2  1  PF01034.15 Syndecan domain
        0.1   10.3   1.7      0.093   10.4   1.1    1.1  1  PF04147.7  Nop14-like family
       0.29   11.4   4.7       0.55   10.6   3.0    1.6  1  PF04520.8  Senescence regulator
       0.34   11.0  10.1       0.54   10.4   7.0    1.3  1  PF09026.5  Centromere protein B dimerisation domain
       0.69    7.4   3.0        1.1    6.8   2.1    1.2  1  PF05086.7  Dictyostelium (Slime Mold) REP protein
        2.5    7.1   6.7        3.3    6.7   4.6    1.1  1  PF06524.7  NOA36 protein


Domain annotation for each model (and alignments):
>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.2     5e-07   0.00098     118     139 ..      99     120 ..      30     126 .. 0.68

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 5e-07
                 ----XXXXXXXXXXXXXXXXXX CS
  PF03066.10 118 eddeedeeeeddeedddeeeee 139
                 + d+ed++++dde++d++ee++
  MMETSP1325-20131115|1681_1  99 DADNEDNDDDDDEDEDEDEEDD 120
                 3444444444444444433332 PP

>> PF01034.15  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.2   2.2e-05     0.043      91     187 ..      18     134 ..       3     158 .. 0.52

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.2e-05
  PF01034.15  91 tttaststktsstvstt...................ttattsPsetateeatttvatetatevqsaaepeqpttpatdedldtevet.seddstptdedeeddeedpeddnkpette 187
                 t+ a t++++s+++  +                    +a+ ++  +a++++ +++a ++at+  +a +p+    ++t+ + d + e+ ++dd++++dedeedd +  +d    +t+ 
  MMETSP1325-20131115|1681_1  18 TAAAATAAEKSRWIADHrvvategrqprpltaaaatAAAAAAAAAAAAAATAAAAAAAAATTAATALPPVAIAIVTTAGPFDADNEDnDDDDDEDEDEDEEDDGRSGCDGDGLSTGS 134
                 444555555555555556665555555555444442111112222222222222222233333356677777777777766655554134455566666666666666666555555 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.1   4.8e-05     0.093     346     369 ..      99     120 ..      50     162 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 4.8e-05
   PF04147.7 346 ededeeeddddeeeeeedvdedee 369
                 ++++e++dddd+e+e+ed+++  +
  MMETSP1325-20131115|1681_1  99 DADNEDNDDDDDEDEDEDEED--D 120
                 333444444443311111111..1 PP

>> PF04520.8  Senescence regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.0   0.00028      0.55      35     104 ..      48     117 ..      15     122 .. 0.51

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00028
   PF04520.8  35 salkastaaaasssaraipkiekgeraaaksakaassapvnvPdwskilksrrrrseeeededdeeddda 104
                 +a++a++aaaa+++a a  +  ++++aaa +++a++  pv++     +   ++ ++++++d+d++ed+d+
  MMETSP1325-20131115|1681_1  48 TAAAATAAAAAAAAAAAAAATAAAAAAAAATTAATALPPVAIAIVTTAGPFDADNEDNDDDDDEDEDEDE 117
                 2333332333333333333333455666666666677788888777654434444444444444444443 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   7.0   0.00028      0.54      13      35 ..      99     120 ..      90     137 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00028
   PF09026.5  13 esdseeeeedeeedeededeede 35 
                 ++d e++++d++ede dedeed+
  MMETSP1325-20131115|1681_1  99 DADNEDNDDDDDEDE-DEDEEDD 120
                 455566666666666.4444444 PP

>> PF05086.7  Dictyostelium (Slime Mold) REP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   2.1   0.00055       1.1     889     910 ..      99     120 ..      77     121 .. 0.63

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00055
   PF05086.7 889 eddkedededededEdededed 910
                 + d+ed+d+d+dedEdede++d
  MMETSP1325-20131115|1681_1  99 DADNEDNDDDDDEDEDEDEEDD 120
                 4455555555556666666555 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   4.6    0.0017       3.3     273     310 ..     100     125 ..      87     141 .. 0.53

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0017
   PF06524.7 273 sdddeeesaedydeeededddddeeedetsenegekea 310
                 +d++++++++d+de+ede+dd            g+  +
  MMETSP1325-20131115|1681_1 100 ADNEDNDDDDDEDEDEDEEDD------------GRSGC 125
                 333333333333333333333............33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1556  (0.113809); expected 273.4 (0.02)
Passed bias filter:                      613  (0.0448362); expected 273.4 (0.02)
Passed Vit filter:                       187  (0.0136776); expected 13.7 (0.001)
Passed Fwd filter:                        66  (0.00482738); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.06u 0.41s 00:00:01.47 Elapsed: 00:00:00.89
# Mc/sec: 444.27
//
Query:       MMETSP1325-20131115|1686_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-43  147.8   0.0    1.8e-43  147.5   0.0    1.1  1  PF00719.14 Inorganic pyrophosphatase


Domain annotation for each model (and alignments):
>> PF00719.14  Inorganic pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.5   0.0   1.3e-47   1.8e-43       1     155 [.     117     294 ..     117     295 .. 0.92

  Alignments for each domain:
  == domain 1    score: 147.5 bits;  conditional E-value: 1.3e-47
                 EEE-SB-TT--EEEEE-S----EEEEE.......E-SSS.B--SSBB--BTT---..........-----BEEEE--SS---TTEEEEEEE---EEEEE---BEEEEEEEETT-CCG.T..T--SGGGS-HHHHHHHHHHHHHTTTTS..TT--EEE--B--HHHHHHHHHHHHHHHH CS
  PF00719.14   1 nvviEipkgsraKyeidkeegllpvdr.......llyvs.lkypanYGfipqtle..........gDgDplDvlvlgseplapgsvvkvrvlGvlaliDegetDdKilavpvedpey.k..dikdvedlppgllkeieefFetykdle..enkfvkvegwkdaeeAlkvieeaieryk 155
                 n+v+Eip+ + aK+e++ke  ++p+ +       ++y+   +  +nYG ipqt+e          gD+DplDv+++gs+pl++g vv+v+vlG l+liDegetD+Ki+a++++dp + +  d++++e  +pg+++++ ++ + yk+ +    + ++ e    ++eA+++iee+++r++
  MMETSP1325-20131115|1686_1 117 NFVVEIPMFQTAKMEVNKELTYNPITQdknkdgsPRYYTyGTPFFNYGLIPQTWEdpelchngacGDNDPLDVMEIGSSPLPMGAVVPVKVLGSLELIDEGETDHKIIAIRTDDPDAyRinDMSSLEYAKPGITEKLIDWLKMYKTSDgkGVNELAQEYPTTKSEAISIIEECHQRWE 294
                 79********************************88777255568********************************************************************99884466888999999*****************8754455678888999*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.36s 00:00:00.94 Elapsed: 00:00:00.49
# Mc/sec: 1516.06
//
Query:       MMETSP1325-20131115|1687_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.62
# Mc/sec: 289.88
//
Query:       MMETSP1325-20131115|1690_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 396.49
//
Query:       MMETSP1325-20131115|1689_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0056   16.5   5.9     0.0064   16.3   4.1    1.2  1  PF03938.9  Outer membrane protein (OmpH-like)
  ------ inclusion threshold ------
       0.01   14.2   0.5      0.011   14.2   0.3    1.1  1  PF00871.12 Acetokinase family
      0.052   13.2   0.6       0.24   11.1   0.3    2.0  1  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.13   12.4   2.5        3.2    8.0   0.1    2.2  2  PF02482.14 Sigma 54 modulation protein / S30EA ribosomal protein
       0.23   11.2   7.4       0.32   10.7   1.8    2.2  2  PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)


Domain annotation for each model (and alignments):
>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   4.1   2.4e-06    0.0064      52     115 ..      60     129 ..       5     131 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 2.4e-06
   PF03938.9  52 lqakkkelqkeqknlqseraqlsaeaekak....eeelqakeqelqayaqqlq..aelqaeqqevlqkli 115
                  qakk el+k+++  q+++     e ++++    + ++++k +el +ya+q+q  a+++aeq ++++kl 
  MMETSP1325-20131115|1689_1  60 AQAKKIELEKLKAIGQRNMVESETENRARRqlalQSQINEKMAELDRYAKQYQslARVEAEQLALIEKLS 129
                 677777777777777777654444444444112266777*************************999986 PP

>> PF00871.12  Acetokinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.3   3.9e-06     0.011      33      97 ..      21      85 ..       6     124 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.9e-06
                ----S-EEEEEE----EEEEE---SSHHHHHHHHHHHHT-----S------BE-EEE-------S CS
  PF00871.12 33 illenaeilkklenekkeeektaladheealklilnalkeekvikdlkeiaaighRvvhggekft 97
                +l++++++ +++ +e+ ++   +++d++  +++++++l++++++ +l++++aig R     e+++
  MMETSP1325-20131115|1689_1 21 VLSPEKFKHTEELAEQCTAFVNKIEDFSGTVHVLVEVLDAQAKKIELEKLKAIGQRNMVESETEN 85
                567788888888899999999***********************************876665554 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   8.7e-05      0.24      41      78 ..      75     112 ..      33     119 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 8.7e-05
   PF06103.6  41 qvdgitketeellaktnelleDvneKvetldpvfqava 78 
                 q + + +ete+   ++ +l+ ++neK+++ld  +++ +
  MMETSP1325-20131115|1689_1  75 QRNMVESETENRARRQLALQSQINEKMAELDRYAKQYQ 112
                 6688999************************9888765 PP

>> PF02482.14  Sigma 54 modulation protein / S30EA ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.3     0.012        34       8      52 ..      26      68 ..      18      88 .. 0.73
   2 ?    8.0   0.1    0.0012       3.2      14      41 ..      92     120 ..      87     132 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.012
  PF02482.14  8 nvevtdalreyveekleklekyfdriisadvtlsk.ekkefkveit 52
                +++ t++l e+ +  ++k+e +     +++v +++ + +++k+e+ 
  MMETSP1325-20131115|1689_1 26 KFKHTEELAEQCTAFVNKIEDFS---GTVHVLVEVlDAQAKKIELE 68
                67777888887777777777777...68999999997778888875 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0012
  PF02482.14  14 alreyveekleklekyfdriis.advtls 41 
                 al+ +++ek+++l++y ++ +s a+v+ +
  MMETSP1325-20131115|1689_1  92 ALQSQINEKMAELDRYAKQYQSlARVEAE 120
                 8999*************988776667655 PP

>> PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.3     0.017        46      38      86 ..      25      76 ..       6      83 .. 0.55
   2 ?   10.7   1.8   0.00012      0.32      48      97 ..      82     131 ..      75     133 .] 0.92

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.017
   PF05852.6 38 kQfektkkslrslek.lkkekelkekvssleteiee..kkkelelLkkfdrk 86
                + f++t+++ +++ + ++k ++++  v+ l   + +  kk ele+Lk++ ++
  MMETSP1325-20131115|1689_1 25 EKFKHTEELAEQCTAfVNKIEDFSGTVHVLVEVLDAqaKKIELEKLKAIGQR 76
                4555555555555541334445555555555554430033355556655555 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00012
   PF05852.6  48 rsleklkkekelkekvssleteieekkkelelLkkfdrkklerleaLtdr 97 
                 ++ ++++++ +l++++++   e+ +  k+ ++L +++ ++l+ +e+L+++
  MMETSP1325-20131115|1689_1  82 ETENRARRQLALQSQINEKMAELDRYAKQYQSLARVEAEQLALIEKLSNN 131
                 5678999****************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1040  (0.0760679); expected 273.4 (0.02)
Passed bias filter:                      490  (0.0358397); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 650.44
//
Query:       MMETSP1325-20131115|1691_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-41  142.0   2.0    2.7e-41  141.8   1.4    1.0  1  PF04258.8  Signal peptide peptidase
  ------ inclusion threshold ------
      0.075   11.7   0.8       0.11   11.1   0.5    1.4  1  PF01080.12 Presenilin


Domain annotation for each model (and alignments):
>> PF04258.8  Signal peptide peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.8   1.4     4e-45   2.7e-41     174     297 ..       2     128 ..       1     129 [. 0.95

  Alignments for each domain:
  == domain 1    score: 141.8 bits;  conditional E-value: 4e-45
   PF04258.8 174 gtsvMveVAkgpadaaeklPillklpqlnslegeaskfsiLGlGDivlPGllialllrfdilk..........kkksriYfvvtlvaYglGLlitivalalfkaaQPALLYlvPatLltllllallrgelkklw 297
                 g svMv+VAk+ +da    Pi+l +p++  l++e+ +fsiLGlGDiv+PGll+alllr+d ++           + s+ Yf ++lv+Y+lGL +t++++ +fkaaQPALLYlvPa++++ lll+l+rg+l +l+
  MMETSP1325-20131115|1691_1   2 GDSVMVTVAKS-LDA----PIKLLFPKT--LAAEKLEFSILGLGDIVIPGLLVALLLRYDSEQasapppyfhaFRFSKPYFSSCLVSYVLGLALTVFIMDYFKAAQPALLYLVPACVGSALLLGLARGQLGALF 128
                 679********.***....********9..4579****************************9********97666677***************************************************9998 PP

>> PF01080.12  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.5   1.6e-05      0.11     354     380 ..      77     103 ..      35     117 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.6e-05
  PF01080.12 354 acfvaiLiGLvltLlllavfkkalPAL 380
                 +c v+ ++GL lt+ ++  fk a PAL
  MMETSP1325-20131115|1691_1  77 SCLVSYVLGLALTVFIMDYFKAAQPAL 103
                 8*************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 927.29
//
Query:       MMETSP1325-20131115|1692_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-33  112.0   2.1    1.3e-10   41.3   0.1    2.6  3  PF13637.1  Ankyrin repeats (many copies)
    1.9e-28   98.4   0.3    3.9e-13   49.4   0.0    2.0  2  PF12796.2  Ankyrin repeats (3 copies)
    7.1e-27   91.7   2.7    8.6e-08   31.5   0.1    4.0  4  PF00023.25 Ankyrin repeat
    4.2e-24   83.9   8.7    1.8e-08   34.2   0.2    3.6  4  PF13857.1  Ankyrin repeats (many copies)
      3e-18   63.9   0.1     0.0038   17.2   0.0    4.1  4  PF13606.1  Ankyrin repeat
     0.0021   17.5   0.8     0.0025   17.2   0.6    1.1  1  PF05403.6  Plasmodium histidine-rich protein (HRPII/III)


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.1   5.7e-14   1.3e-10       3      53 ..       2      52 ..       1      53 [. 0.96
   2 !   39.8   0.0   1.7e-13   3.9e-10       1      53 [.      33      86 ..      33      87 .. 0.94
   3 !   41.3   0.0   5.8e-14   1.3e-10       2      53 ..      68     119 ..      67     120 .. 0.96

  Alignments for each domain:
  == domain 1    score: 41.3 bits;  conditional E-value: 5.7e-14
   PF13637.1  3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                t+ hyaa+ g++e+++lL ++ ++++ +d+ G+t+ h+Aa++g++ +lklL
  MMETSP1325-20131115|1692_1  2 TPAHYAAQGGHVEMLRLLADRWASLDVVDNHGRTPAHYAAQGGHVAVLKLL 52
                788****************99999999*999******************99 PP

  == domain 2    score: 39.8 bits;  conditional E-value: 1.7e-13
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgid.inrtdesGntaLhiAalrgnieilklL 53
                g+t+ hyaa+ g++ ++klL ek+++ ++++d +++t+ h+Aa++g++ +l+lL
  MMETSP1325-20131115|1692_1 33 GRTPAHYAAQGGHVAVLKLLAEKKPSsLDAVDVDNMTPTHYAAQGGHVAVLELL 86
                689*******************986659999*********************99 PP

  == domain 3    score: 41.3 bits;  conditional E-value: 5.8e-14
   PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                 +t+ hyaa+ g++ +++lL +kg++++++d++++t+ h+A ++ ++ +l+lL
  MMETSP1325-20131115|1692_1  68 MTPTHYAAQGGHVAVLELLADKGASLDAVDDYNRTPAHYATQGRHVGVLELL 119
                 7889***********************************************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.1   4.7e-16   1.1e-12      28      83 ..       2      57 ..       1      64 [. 0.94
   2 !   49.4   0.0   1.7e-16   3.9e-13      22      86 ..      64     127 ..      58     130 .. 0.92

  Alignments for each domain:
  == domain 1    score: 48.0 bits;  conditional E-value: 4.7e-16
   PF12796.2 28 tpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83
                tp h+Aa+ g++e+++lL ++ a+++  d++g+tp h+A++ gh+ ++klL ek+ 
  MMETSP1325-20131115|1692_1  2 TPAHYAAQGGHVEMLRLLADRWASLDVVDNHGRTPAHYAAQGGHVAVLKLLAEKKP 57
                899*************************************************9954 PP

  == domain 2    score: 49.4 bits;  conditional E-value: 1.7e-16
   PF12796.2  22 dvdlgetpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86 
                 dvd + tp h+Aa+ g++++++lL ++ga+++a d++++tp h+A + +h+ +++lL +kg +v+
  MMETSP1325-20131115|1692_1  64 DVD-NMTPTHYAAQGGHVAVLELLADKGASLDAVDDYNRTPAHYATQGRHVGVLELLTDKGPSVE 127
                 455.789******************************************************9886 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   2.7e-08   6.1e-05       4      33 .]       2      31 ..       1      31 [. 0.96
   2 !   22.3   0.0   3.1e-08     7e-05       1      32 [.      32      64 ..      32      65 .. 0.94
   3 !   31.5   0.1   3.8e-11   8.6e-08       1      33 []      66      98 ..      66      98 .. 0.97
   4 !   13.3   0.0   2.1e-05     0.049       2      28 ..     100     126 ..      99     128 .. 0.93

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.7e-08
                BHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  4 TPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                TP H+Aa+ g++e+++lL ++ A+l+++d+
  MMETSP1325-20131115|1692_1  2 TPAHYAAQGGHVEMLRLLADRWASLDVVDN 31
                99*************************997 PP

  == domain 2    score: 22.3 bits;  conditional E-value: 3.1e-08
                TSCBHHHHHHHTTHHHHHHHHHH.TTSSTTHBH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLls.qGAdlnaqd 32
                +G+TP H+Aa+ g++ v+klL + +  +l+a+d
  MMETSP1325-20131115|1692_1 32 HGRTPAHYAAQGGHVAVLKLLAEkKPSSLDAVD 64
                7**********************9999999987 PP

  == domain 3    score: 31.5 bits;  conditional E-value: 3.8e-11
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                d +TP H+Aa+ g++ v++lL ++GA+l+a+dd
  MMETSP1325-20131115|1692_1 66 DNMTPTHYAAQGGHVAVLELLADKGASLDAVDD 98
                689****************************97 PP

  == domain 4    score: 13.3 bits;  conditional E-value: 2.1e-05
                 SCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdl 28 
                  +TP H+A +  ++ v++lL ++G ++
  MMETSP1325-20131115|1692_1 100 NRTPAHYATQGRHVGVLELLTDKGPSV 126
                 58**********************998 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.1   7.9e-09   1.8e-05      18      52 ..       2      36 ..       1      36 [. 0.98
   2 !   30.6   0.1     1e-10   2.4e-07       8      52 ..      25      70 ..      19      70 .. 0.94
   3 !   34.2   0.2   7.7e-12   1.8e-08       1      56 []      51     107 ..      51     107 .. 0.95
   4 !   15.5   0.0   5.9e-06     0.013       1      36 [.      86     120 ..      86     126 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 7.9e-09
   PF13857.1 18 tpLhlAakggalevvrlLlapgadlnlrdsdglta 52
                tp h+Aa gg++e++rlL ++ a+l++ d++g+t+
  MMETSP1325-20131115|1692_1  2 TPAHYAAQGGHVEMLRLLADRWASLDVVDNHGRTP 36
                9*********************************8 PP

  == domain 2    score: 30.6 bits;  conditional E-value: 1e-10
   PF13857.1  8 dvnatdeggntpLhlAakggalevvrlLl.apgadlnlrdsdglta 52
                +++  d++g+tp h+Aa gg++ v++lL  +++++l++ d d+ t+
  MMETSP1325-20131115|1692_1 25 SLDVVDNHGRTPAHYAAQGGHVAVLKLLAeKKPSSLDAVDVDNMTP 70
                67889**************************************998 PP

  == domain 3    score: 34.2 bits;  conditional E-value: 7.7e-12
   PF13857.1   1 Llehg.padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 Ll++  p +++a d  ++tp h+Aa gg++ v++lL ++ga+l++ d +++t+ ++A
  MMETSP1325-20131115|1692_1  51 LLAEKkPSSLDAVDVDNMTPTHYAAQGGHVAVLELLADKGASLDAVDDYNRTPAHYA 107
                 6677779***********************************************998 PP

  == domain 4    score: 15.5 bits;  conditional E-value: 5.9e-06
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLl 36 
                 L+++g a+++a d +++tp h+A  g ++ v++lL 
  MMETSP1325-20131115|1692_1  86 LADKG-ASLDAVDDYNRTPAHYATQGRHVGVLELLT 120
                 77889.99999999999****************995 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   1.8e-05     0.041       4      28 ..       2      26 ..       1      28 [. 0.90
   2 !   17.0   0.0   1.9e-06    0.0044       1      25 [.      32      56 ..      32      62 .. 0.88
   3 !   17.2   0.0   1.6e-06    0.0038       2      29 ..      67      94 ..      66      95 .. 0.92
   4 !   11.1   0.0   0.00015      0.35       1      28 [.      99     126 ..      99     128 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.8e-05
   PF13606.1  4 TpLhlAasngrielveaLlengadi 28
                Tp h+Aa+ g++e++++L ++ a +
  MMETSP1325-20131115|1692_1  2 TPAHYAAQGGHVEMLRLLADRWASL 26
                99****************9998876 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 1.9e-06
   PF13606.1  1 nGnTpLhlAasngrielveaLleng 25
                +G+Tp h+Aa+ g+++++++L e+ 
  MMETSP1325-20131115|1692_1 32 HGRTPAHYAAQGGHVAVLKLLAEKK 56
                69*******************9974 PP

  == domain 3    score: 17.2 bits;  conditional E-value: 1.6e-06
   PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                + Tp h+Aa+ g+++++e+L ++ga ++
  MMETSP1325-20131115|1692_1 67 NMTPTHYAAQGGHVAVLELLADKGASLD 94
                68***********************987 PP

  == domain 4    score: 11.1 bits;  conditional E-value: 0.00015
   PF13606.1   1 nGnTpLhlAasngrielveaLlengadi 28 
                 +++Tp h+A + +++ ++e+L ++g+ +
  MMETSP1325-20131115|1692_1  99 YNRTPAHYATQGRHVGVLELLTDKGPSV 126
                 689*********************9987 PP

>> PF05403.6  Plasmodium histidine-rich protein (HRPII/III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.6   1.1e-06    0.0025      96     203 ..       4     112 ..       1     122 [. 0.66

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.1e-06
   PF05403.6  96 ahhaadahhahhaadaahahhaadahhahhaadahhaadahhaayahh.ahhaadahhaadahhaadahhaadahhaadshtahhaadahhaadahhaddahhdadahh 203
                 ah+aa+  h       a+   + d    h  + ah+aa+  h a  +  a +   +  a d    + +h+aa+  h a    +     +  a d + ++ ah++++  h
  MMETSP1325-20131115|1692_1   4 AHYAAQGGHVEMLRLLADRWASLDVVDNHGRTPAHYAAQGGHVAVLKLlAEKKPSSLDAVDVDNMTPTHYAAQGGHVAVLELLADKGASLDAVDDYNRTPAHYATQGRH 112
                 8999999998888888888888888889999999999997776665555777777777777666666666666666666444433334444444444455555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 679.78
//
Query:       MMETSP1325-20131115|1693_1  [L=346]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-36  123.1   0.1    1.2e-35  122.4   0.1    1.3  1  PF14308.1  X-domain of DnaJ-containing
      1e-23   82.7   1.5    2.6e-23   81.4   1.1    1.7  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF14308.1  X-domain of DnaJ-containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.4   0.1   1.8e-39   1.2e-35       2     190 ..     143     326 ..     142     339 .. 0.88

  Alignments for each domain:
  == domain 1    score: 122.4 bits;  conditional E-value: 1.8e-39
   PF14308.1   2 eqkkreeeLaekLrdrlseyvdgnk.deFkeklekeieeLkeesFglellhtIGkvYenkAnaflgksktflglsgifasvkekgksvkstfsalssaldaqksmeemekeeeeegeeteeelaemeekvtgkilaaawaiskfdiestlrkvCdkvLkDksvdkktRikRAeaLkilGkifqkvkrske 190
                  q+ re+eLa  L +rl++yvdg +  ++++++e+e ++L  ++Fg  ++  +G+vY n+A+++  + ++ lg+   +  ++++ ++ + t ++ +s++ + + +++++++       ++e+++e+ +k+t+ +l+++ +++++die+t+  vC++vL+D sv+ ++R++R eaL ilG if+++k+   
  MMETSP1325-20131115|1693_1 143 MQRTREVELAIALVNRLQPYVDGTEaVAWTDNMEEESKHLADAPFGEPMVRHVGYVYSNYAQRYAFTLESTLGIASCAGGLHNMSMKCEVTSNISNSFSVV-SEQHKAQNQP-----FSDESKQESANKITNAVLQTVAQVTLLDIEETVAAVCERVLSDTSVNADVRRRRCEALGILGGIFERAKSMDG 326
                 699******************9555489******************************************************9999999888877765443.3333333333.....467889999999*******************************************************998754 PP

>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.4   1.1   3.8e-27   2.6e-23       1      64 []      22      84 ..      22      84 .. 0.99

  Alignments for each domain:
  == domain 1    score: 81.4 bits;  conditional E-value: 3.8e-27
                HHHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26  1 dyYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevLsdpekraeyd 64
                +yY++L+v+++a+d+++kkaY+  ++k+HPDkn++d+ ea++kf+e+++Ay++L dp +ra+yd
  MMETSP1325-20131115|1693_1 22 TYYDLLNVQPGATDSQLKKAYYVQSRKVHPDKNPGDP-EAAKKFQEMSDAYQILADPVQRAKYD 84
                69***********************************.9************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1625.76
//
Query:       MMETSP1325-20131115|1695_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|1696_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 434.06
//
Query:       MMETSP1325-20131115|1699_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.054   13.3   2.1      0.069   12.9   1.5    1.1  1  PF00745.15 Glutamyl-tRNAGlu reductase, dimerisation domain


Domain annotation for each model (and alignments):
>> PF00745.15  Glutamyl-tRNAGlu reductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.5   5.1e-06     0.069      29      72 ..       5      49 ..       4      51 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.1e-06
  PF00745.15 29 alrekaeeireeelekalkklalgedpeevleklar.sltnkllh 72
                alre+ae  +++el+   + + +ge+ +++++k+a+ +lt k++ 
  MMETSP1325-20131115|1699_1  5 ALREQAELKAAAELAAQQNSGLKGEELDNEIRKMAKeKLTAKIMA 49
                79*********************************7469999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 368.33
//
Query:       MMETSP1325-20131115|1700_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 286.71
//
Query:       MMETSP1325-20131115|1697_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-47  158.9   0.0    4.7e-47  158.7   0.0    1.0  1  PF00179.21 Ubiquitin-conjugating enzyme
     0.0033   17.1   0.2     0.0036   17.0   0.1    1.4  1  PF05773.17 RWD domain
  ------ inclusion threshold ------
      0.099   13.1   0.7       0.16   12.4   0.3    1.5  2  PF09392.5  Type III secretion needle MxiH like


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.7   0.0     1e-50   4.7e-47       1     138 [.       9     145 ..       9     147 .. 0.98

  Alignments for each domain:
  == domain 1    score: 158.7 bits;  conditional E-value: 1e-50
                 HHHHHHHHHHHS-TTCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-.----B-HGGGSTTT--TT--HHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
  PF00179.21   1 rlqkelkelskkkpegikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvd.etGeicldiLkeekWspaltlesvLlsiqsllaepnpesplnkeaakllkknreeykkkvke 138
                 rl+ke++e+s+++ egi+a + +  +l++w+++i gpegtpYegg+F+++i fp+eYPfk+Pkvkf+tki+HPnv+  tGeic d++++  Wsp+l+l++vL  iq+ ++epn++spl++++a++l++++e++++k+k+
  MMETSP1325-20131115|1697_1   9 RLTKEMNEISNDPVEGIDAAPLDG-DLYHWQAMIDGPEGTPYEGGIFTIDIVFPPEYPFKAPKVKFETKIYHPNVKtDTGEICADLIQNG-WSPTLNLRHVLCTIQQVMKEPNTDSPLEASIAAQLTEDKEAFDAKAKQ 145
                 89*********************7.9**************************************************************77.********************************************9976 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1     8e-07    0.0036      50      78 ..      53      83 ..       9     149 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 8e-07
                xxxxxxxxxxxxxxxxxxxxxxxxxxxx..x RF
  PF05773.17 50 sleleirlpedYPeeaPiitlsstelsl..k 78
                 ++++i +p++YP +aP+++++++      k
  MMETSP1325-20131115|1697_1 53 IFTIDIVFPPEYPFKAPKVKFETKIYHPnvK 83
                57899***************99986665443 PP

>> PF09392.5  Type III secretion needle MxiH like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.9   8.4e+03      35      53 ..       5      21 ..       2      27 .. 0.63
   2 ?   12.4   0.3   3.4e-05      0.16       4      45 ..     111     151 ..     108     153 .] 0.90

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 1.9
                XXXXX...........XXX CS
   PF09392.5 35 aaarasasevtstasvsdp 53
                +a+r++ +e+  ++ ++dp
  MMETSP1325-20131115|1697_1  5 GANRRLTKEM--NEISNDP 21
                5666666666..5556665 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 3.4e-05
                 XXXXXXXXXXXX.......XXXXXXXXXXXXXXXXX...... CS
   PF09392.5   4 Fvqamkvaqahsaagagntyaeisaaldaakaaarasasevt 45 
                 ++q mk++  +s +++ +++a++++  +a++a+a+++ +e +
  MMETSP1325-20131115|1697_1 111 IQQVMKEPNTDS-PLEASIAAQLTEDKEAFDAKAKQMTEEFA 151
                 7899********.*********************99888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.60
# Mc/sec: 611.07
//
Query:       MMETSP1325-20131115|1701_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-23   81.5   0.1    6.5e-23   80.8   0.1    1.3  1  PF04607.12 Region found in RelA / SpoT proteins
     0.0016   18.1   0.8         22    4.8   0.0    4.3  5  PF02824.16 TGS domain


Domain annotation for each model (and alignments):
>> PF04607.12  Region found in RelA / SpoT proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.1   9.5e-27   6.5e-23      20     114 ..      11     121 ..       3     123 .. 0.94

  Alignments for each domain:
  == domain 1    score: 80.8 bits;  conditional E-value: 9.5e-27
                 CCCCCC-S--E-EEEEESS..............TTHHHHHHHHHHT-SSSEEEEEEEES---------EEEEEE------EEEEEEEEEEEHHHHHHHH..HHHHHHHHC- CS
  PF04607.12  20 eekfeeitDligiRvivef..............kddcykvlelvkklwdpkpkrfkdyiaepkengYrslHtvveaekgeekvlvEiQiRtiemeawae..iehhlrYkek 114
                 +++ +++ D i++Rv+++               +  cy+vlelv+k+w ++  r+kdyi++pken Y+ lHt++++  +   +++E+Q+Rt +m+++ae   ++h  Yk++
  MMETSP1325-20131115|1701_1  11 SNAVDQVLDAIALRVVLKPdareasvartavrgEALCYHVLELVHKQWAHMDFRVKDYIDRPKENDYQALHTTCTMRYHGVVYPFEVQVRTQDMHRVAEwgKAAHFAYKQN 121
                 46899************888899***************************************************99999999******************99*******87 PP

>> PF02824.16  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.11   7.6e+02       2      26 ..      24      50 ..      23      60 .. 0.70
   2 !    4.1   0.0    0.0055        38      10      37 ..     104     131 ..      95     145 .. 0.83
   3 ?    3.0   0.0     0.012        81      18      47 ..     188     218 ..     171     221 .. 0.76
   4 ?    1.3   0.0     0.041   2.8e+02       3      21 ..     207     225 ..     205     226 .. 0.81
   5 !    4.8   0.0    0.0032        22      38      55 ..     243     260 ..     242     262 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.11
                EEES.---EEEEEETTT-.HHHHHHHH CS
  PF02824.16  2 rvyt.pdGkvpdlprgst.veDfAykI 26
                rv++ pd+++  + r +   e ++y++
  MMETSP1325-20131115|1701_1 24 RVVLkPDAREASVARTAVrGEALCYHV 50
                899999999988666666566667765 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0055
                 EEEEETTT-HHHHHHHH-S--GGG--EE CS
  PF02824.16  10 vpdlprgstveDfAykIhrslakkfiyA 37 
                    + ++  + +fAyk + + ak++ ++
  MMETSP1325-20131115|1701_1 104 MHRVAEWGKAAHFAYKQNPDEAKSMAGV 131
                 344889999*************999886 PP

  == domain 3    score: 3.0 bits;  conditional E-value: 0.012
                 -HHHHHHHH-S--GGG--EEE.ETSSEE-SS CS
  PF02824.16  18 tveDfAykIhrslakkfiyAl.VnGqrvgls 47 
                 ++ + A ++h +l++k +y+  V G++ +l+
  MMETSP1325-20131115|1701_1 188 SACEYADRLHDELQDKRVYVFgVSGEIMDLE 218
                 467899*********9999854667777765 PP

  == domain 4    score: 1.3 bits;  conditional E-value: 0.041
                 EES---EEEEEETTT-HHH CS
  PF02824.16   3 vytpdGkvpdlprgstveD 21 
                 v+   G++ dl rg tv++
  MMETSP1325-20131115|1701_1 207 VFGVSGEIMDLERGVTVRE 225
                 55567999********997 PP

  == domain 5    score: 4.8 bits;  conditional E-value: 0.0032
                 EETSSEE-SSS---TTEE CS
  PF02824.16  38 lVnGqrvglshvLedgDv 55 
                 +VnG+    +++L++gD 
  MMETSP1325-20131115|1701_1 243 RVNGKAARPDYELQNGDH 260
                 79***************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 1265.28
//
Query:       MMETSP1325-20131115|1698_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.9e-105  350.0   0.0   4.5e-105  349.8   0.0    1.0  1  PF00244.15 14-3-3 protein
    0.00016   21.3   0.6     0.0056   16.4   0.0    2.8  3  PF13424.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF00244.15  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  349.8   0.0  6.5e-109  4.5e-105       1     235 [.       6     242 ..       6     243 .. 0.96

  Alignments for each domain:
  == domain 1    score: 349.8 bits;  conditional E-value: 6.5e-109
                 HHHHHHHHHHHHHTT-HHHHHHHH---TT-..--.--HHHHHHHHHHHHHH----HHHHHHHHHHHHHHT---------HHHHHHHHHHHHH---HHHH---TTTTHHHH--....-HHHHHHHHHH---HHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHS-TT-TTT---HHHHHHHHHHTSS-HHHHHHHHHHHHHHHHTTGGGSHHHHHHHHHHHHHHHHHHHHHHT------ CS
  PF00244.15   1 reelvylaklaeqaeryddmveamkklvel..keeLsveernLLsvayKnvigarRaswrilssieqkeeskgkekkvklikeyrkkiekeLkeiCedvlelldkklipkas....sseskvFylkmkgDyyRYlaEfssgeerkeaaekaleaYkeAleiaeselkpthpirLglaLnfsVFyYEilnspekAcelakqafdeaiaeldslseesykdstlimqLLrdNltlWtseeeee 235
                 r++lvy+aklaeq er+d+mve+mkk++++    eL+veernLLsvayKnvig+rRa+wr++ssieqk +      ++ li+ey+ kiekeL eiC+++l ++++ lip+++    s+e kvFy+km+gDy+RYlaEf+  eerk  ++ aleaY++A++ a+++l+pthpirLglaLnfsVFyYEi+ sp++Ac+lakqafd+aiaeld+lseesykdstlimqLLrdNltlWts++ +e
  MMETSP1325-20131115|1698_1   6 RDSLVYMAKLAEQGERFDEMVEYMKKVATFegGMELNVEERNLLSVAYKNVIGSRRATWRVFSSIEQKADP----AQIGLIREYKDKIEKELVEICSEILGIITDDLIPRCEgsenSAEGKVFYYKMQGDYHRYLAEFQAPEERKVSTQGALEAYEKASQNATESLPPTHPIRLGLALNFSVFYYEIMGSPDRACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGDE 242
                 689***************************99889*********************************875....59*********************************8544448899*********************************************************************************************************************9876 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.037   2.5e+02      48      72 ..       8      32 ..       5      36 .. 0.72
   2 ?   -1.1   0.1      0.24   1.6e+03      15      28 ..     126     139 ..     122     141 .. 0.72
   3 !   16.4   0.0   8.1e-07    0.0056      23      74 ..     151     204 ..     145     206 .. 0.95

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.037
   PF13424.1 48 alnnlanlylalgdydeAleylekA 72
                +l  +a l ++ +++de +ey +k+
  MMETSP1325-20131115|1698_1  8 SLVYMAKLAEQGERFDEMVEYMKKV 32
                5666777777777888888887776 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.24
   PF13424.1  15 lrrlgdydeAlely 28 
                 ++++gdy++ l+ +
  MMETSP1325-20131115|1698_1 126 YKMQGDYHRYLAEF 139
                 66999998866655 PP

  == domain 3    score: 16.4 bits;  conditional E-value: 8.1e-07
   PF13424.1  23 eAlelyekalel.lrelgddhpdtaralnnlanlyla.lgdydeAleylekAle 74 
                  Ale yeka +   ++l+++hp ++ + +n +  y++ +g  d A  + ++A +
  MMETSP1325-20131115|1698_1 151 GALEAYEKASQNaTESLPPTHPIRLGLALNFSVFYYEiMGSPDRACHLAKQAFD 204
                 69***********************************9*************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       517  (0.0378145); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.65
# Mc/sec: 943.80
//
Query:       MMETSP1325-20131115|1702_1  [L=301]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-05   21.6   0.0    0.00012   20.8   0.0    1.3  1  PF03643.10 Vacuolar protein sorting-associated protein 26


Domain annotation for each model (and alignments):
>> PF03643.10  Vacuolar protein sorting-associated protein 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   8.9e-09   0.00012      76     211 ..      18     172 ..       5     190 .. 0.81

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 8.9e-09
  PF03643.10  76 nsvdfisl.vkdlakpGelqesksfpfefkklekr...yesYkGknvklrYvlrvtvvRkl..kditkekdlivhefttaPevn............ksvklevGiedc.lhiefeyskskyhLkdvivGkiyfllvrikiksmelslikrestGl 211
                 n+vd+  l v+   +pG ++ +  +pfef     +    e+Y+G+   l++ + v++ R     di++ k ++  + ++aP+              + v  e+ + d    i +ey+   y+L +++   i +  ++  + ++ + ++++e +G 
  MMETSP1325-20131115|1702_1  18 NNVDIAELvVIPKRRPGYMKGAVDIPFEFDLGRSKwkwNETYHGHTFGLHHNITVQLDRPWytFDIMHSKPVALERISKAPKASvgvvseanaangQMVPHELLLPDYpGKIKMEYAIDSYNLDETLKASIVMDGTNEPVEYLSVMIVREEFSGG 172
                 5555554413455789*************8766554557********************98778*****************655555566667777999999988775269*******************9999999**************9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.33s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1414.32
//
Query:       MMETSP1325-20131115|1705_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 1058.01
//
Query:       MMETSP1325-20131115|1704_1  [L=321]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-14   53.7  11.5    4.3e-06   26.2   0.1    3.8  3  PF00153.22 Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.017   14.5   0.0       0.48    9.7   0.0    2.5  2  PF09536.5  Protein of unknown function (DUF2378)
       0.75    9.6   5.2       0.52   10.1   0.1    2.7  3  PF04138.9  GtrA-like protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   3.0    0.0012       5.3      12      92 ..      47     133 ..      39     137 .. 0.60
   2 !   23.3   0.0   7.4e-09   3.4e-05       3      95 ..     142     227 ..     140     228 .. 0.91
   3 !   26.2   0.1   9.5e-10   4.3e-06       7      77 ..     239     305 ..     235     315 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0012
                 ---HHHCCHHH.CHHHHHHHHHHH-SS--GCGS-.---HHHHHHHHHH--.........-GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22  12 GaiAgaiaalv.ttPldvvKtrlqksaasassky.kgildalkkiykeeG.........irglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                 G++Aga+a ++ +t l  ++t +       + ky  g+++al+ ++             ir +yrG++p++l+  +++    ++ e +  ll
  MMETSP1325-20131115|1704_1  47 GGLAGAAAMVInVTTLMWMRTTVN-----FQYKYgMGTFEALRFVFNDGAkdgggtfggIRRFYRGYGPAILQGPLSRFGDTAANEGMLALL 133
                 555555544332444444555544.....223333555555444443333444488888*************98888887777777776665 PP

  == domain 2    score: 23.3 bits;  conditional E-value: 7.4e-09
                 HHHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH-GG CS
  PF00153.22   3 lsvlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkllskk 95 
                 l+v+++ +a+++A+a+ +++ +P+d +Kt lq        +  g +  l++ + ++G++ l+ G+  ++  +++ +  +f+t +++ +++ k+
  MMETSP1325-20131115|1704_1 142 LPVAAKSVAASAAAAAFRVFLMPIDCLKTTLQ-------VEGAGGMALLRNKISTNGPLVLFHGWEGAISATFVGHYPWFFTRNAMSEVMPKY 227
                 56778889999999999***************.......667889999**********************************99999998776 PP

  == domain 3    score: 26.2 bits;  conditional E-value: 9.5e-10
                 HHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GG.GG---HHHHHHHHHH CS
  PF00153.22   7 ksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirg.lyrGllpnllrvvpa 77 
                  ++++G +A a++++v + + v+Kt  q      s    + +da k+i+ ++G++g l+rGl+++++ +  +
  MMETSP1325-20131115|1704_1 239 VNAVIGFTASAVSDTVSNSVRVLKTSRQ-----TSDVPITYMDAAKNIIAKDGVQGlLFRGLGTKIISNGAQ 305
                 6789************************.....788889***************7736********987665 PP

>> PF09536.5  Protein of unknown function (DUF2378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00011      0.48      53     113 ..     216     278 ..     213     284 .. 0.89
   2 ?    1.9   0.0     0.026   1.2e+02       5      26 ..     283     304 ..     279     312 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00011
   PF09536.5  53 lraaaeelapql.peeealralGeravegFletlvGrallsligllgPrrllsrlpsayr.aa 113
                 +r a  e++p++  +++ +  lG +av gF  ++v  ++ + +++l++ r  s +p +y  aa
  MMETSP1325-20131115|1704_1 216 TRNAMSEVMPKYdRKKDFFSYLGVNAVIGFTASAVSDTVSNSVRVLKTSRQTSDVPITYMdAA 278
                 677899999***88899999************************************9997444 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.026
   PF09536.5   5 pedtveGLffralldrvreela 26 
                  +d v+GL+fr+l+ ++ ++ a
  MMETSP1325-20131115|1704_1 283 AKDGVQGLLFRGLGTKIISNGA 304
                 6799*********998875554 PP

>> PF04138.9  GtrA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1     0.059   2.7e+02      68      93 ..      48      73 ..      34      89 .. 0.58
   2 ?   -2.9   0.1       1.3   5.7e+03      65      74 ..     146     155 ..     123     164 .. 0.49
   3 ?   10.1   0.1   0.00011      0.52      16      81 ..     179     250 ..     170     317 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.059
   PF04138.9 68 vlvsllglllnllilwllvellglea 93
                 l+ ++++++n+ +l+++ + +++++
  MMETSP1325-20131115|1704_1 48 GLAGAAAMVINVTTLMWMRTTVNFQY 73
                45555555555555555555554444 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.3
   PF04138.9  65 lkfvlvsllg 74 
                 +k v++s+++
  MMETSP1325-20131115|1704_1 146 AKSVAASAAA 155
                 2222222222 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 0.00011
   PF04138.9  16 vlllllellglsyllAnaiafivailfnfilnrlwtFrkrekakl......lkqflkfvlvsllglllnlli 81 
                  ++ll + ++ +  l  + +++ ai ++f+++  w F  +  +++       k+f+ ++ v+++  +  +++
  MMETSP1325-20131115|1704_1 179 GMALLRNKISTNGPLVLFHGWEGAISATFVGHYPWFFTRNAMSEVmpkydrKKDFFSYLGVNAVIGFTASAV 250
                 567888889999999999*********************999998999999999999999977665555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.52
# Mc/sec: 1479.29
//
Query:       MMETSP1325-20131115|1707_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   14.1   1.3      0.038   13.6   0.9    1.2  1  PF05192.13 MutS domain III
      0.063   11.4   0.1      0.075   11.2   0.1    1.1  1  PF03403.8  Platelet-activating factor acetylhydrolase, isoform II


Domain annotation for each model (and alignments):
>> PF05192.13  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.9   5.5e-06     0.038      44     114 ..      57     164 ..      45     176 .. 0.57

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5.5e-06
                 S-B-----HHHHHHHH--------TT.---HHHHTT---HHHHHHHH..................................H-----.TTT---HHHHH.HHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx..................................xxxxxx.xxxxxxxxxxx.xxxxxxxx RF
  PF05192.13  44 sPltdiaeinaRldaveallenealr.edlrelLkklpDlerllsrl..................................algras.prdllalkstl.kalpelkk 114
                 +  ++ a+i a  da +  ++++ +   +l+++Lk l D++rll+ +                                  +l++    +d+++  st+  +l el++
  MMETSP1325-20131115|1707_1  57 AARREEAQIDAAADAAALRRQQKRVKrKELKRHLKALRDIQRLLRDIdvvdeffrkaqltaeltadsvaaesvasllggavSLRSPIlEEDFADASSTFaISLHELRE 164
                 556788999999999999998666556*****************9964444433333322222222222222221111111222221355555555555434444443 PP

>> PF03403.8  Platelet-activating factor acetylhydrolase, isoform II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   1.1e-05     0.075     176     255 ..      68     148 ..      40     158 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.1e-05
   PF03403.8 176 eeeevklrneqvkqRaeEcskalklleeidlGepkenvsldssfdleqlKdkldtskvav..iGHSFGgAtvikslsedteF 255
                 + +   lr++q + + +E+++ lk+l++i+    + +v +d+ f  +ql  +l   +va   +    GgA +++s   + +F
  MMETSP1325-20131115|1707_1  68 AADAAALRRQQKRVKRKELKRHLKALRDIQRLLRDIDV-VDEFFRKAQLTAELTADSVAAesVASLLGGAVSLRSPILEEDF 148
                 3556789999999999**************9999****.**************99997642245568999999887777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       991  (0.0724839); expected 273.4 (0.02)
Passed bias filter:                      577  (0.042203); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.41s 00:00:00.96 Elapsed: 00:00:00.50
# Mc/sec: 867.48
//
Query:       MMETSP1325-20131115|1708_1  [L=369]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   17.2   0.2     0.0071   15.9   0.1    1.7  1  PF13456.1  Reverse transcriptase-like
     0.0066   15.7   0.0      0.025   13.8   0.0    1.8  2  PF00078.22 Reverse transcriptase (RNA-dependent DNA polymerase)


Domain annotation for each model (and alignments):
>> PF13456.1  Reverse transcriptase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1     1e-06    0.0071      17      85 ..     239     308 ..     224     311 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1e-06
   PF13456.1  17 AlelgirrlivesDsqlvvqqvqgedeekselaallaeirsllkk.fesvsvshvpReqNrvAdaLAkla 85 
                 A +l  + ++ ++D+++ v+ vq++ ++  +l+ lla  +++ k+ +  v v++v+ e N vAda ++l 
  MMETSP1325-20131115|1708_1 239 ASSLRGQTVVSYCDNNAWVKSVQSGAPKDPRLRELLAIHHQICKEhDLTVHVKYVHTETNIVADAASRLR 308
                 455666778889**********99876666***************899*****************99876 PP

>> PF00078.22  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   3.6e-06     0.025     160     213 ..      20      70 ..       8      71 .. 0.89
   2 ?   -1.3   0.0      0.15   1.1e+03     158     194 ..     247     289 ..     223     294 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.6e-06
  PF00078.22 160 rYaDDiligakskeeleeileeveeflkelglelnpeKtkithksdevkflGyv 213
                  Y+DDi+++a ++  +  +l+++ + + + g++l+p+K ++     ++++lG+ 
  MMETSP1325-20131115|1708_1  20 GYIDDIILAAPGQGRTLIMLNALWSTCDRFGVKLAPDKASFG---MRCTVLGFD 70 
                 6**************************************998...677777775 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.15
  PF00078.22 158 yvrYaDDiligakskee.......leeileeveeflkelgleln 194
                 +v+Y D    ++ks++        l+e+l++ ++++ke+ l+++
  MMETSP1325-20131115|1708_1 247 VVSYCDNN-AWVKSVQSgapkdprLRELLAIHHQICKEHDLTVH 289
                 55555543.34444444456668899999999999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.37s 00:00:01.02 Elapsed: 00:00:00.56
# Mc/sec: 1579.03
//
Query:       MMETSP1325-20131115|1711_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.26   11.2   7.4        1.8    8.5   2.2    2.2  2  PF04519.8 Polymer-forming cytoskeletal
       0.62    9.3   3.1        2.2    7.5   0.4    2.2  2  PF13363.1 Beta-galactosidase, domain 3
        5.5    7.0   9.2         26    4.9   0.1    3.3  3  PF06715.7 Gp5 C-terminal repeat (3 copies)


Domain annotation for each model (and alignments):
>> PF04519.8  Polymer-forming cytoskeletal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.2   0.00039       1.8      11      62 ..       2      54 ..       1      57 [. 0.88
   2 ?    4.3   0.1    0.0079        36       9      30 ..      58      79 ..      55      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00039
   PF04519.8 11 ieGdiefegelridGkveGnika.egklvigesgkveGeikaeeviinGeveG 62
                i+G i+  ++l++ G  +G+    +g ++  ++ +v G  + +++++ G ++G
  MMETSP1325-20131115|1711_1  2 ITGAITGASTLSVGGAATGTTLKmTGAITGDTTLSVGGAATGTTLKMTGAITG 54
                89999*9*********9997655599999999999999999999999999998 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0079
   PF04519.8  9 tkieGdiefegelridGkveGn 30
                + i+G i+ +++l++ G  +G+
  MMETSP1325-20131115|1711_1 58 LDITGAITGDSTLSVGGAATGT 79
                5799999999999999999986 PP

>> PF13363.1  Beta-galactosidase, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.4   0.00049       2.2      31      60 ..      18      46 ..       5      53 .. 0.84
   2 ?    3.9   0.2    0.0066        30      32      69 ..      42      79 ..      40      83 .. 0.66

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00049
                E---EEEEEEEBSS---EEEE-------EE CS
   PF13363.1 31 lsgstLsLtGDfnatttleviappksvktl 60
                 +g+tL++tG +  +ttl v ++  + +tl
  MMETSP1325-20131115|1711_1 18 ATGTTLKMTGAITGDTTLSVGGA-ATGTTL 46
                579*****************998.455555 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.0066
                ---EEEEEEEBSS---EEEE-------EEEE---EE-- CS
   PF13363.1 32 sgstLsLtGDfnatttleviappksvktltwNgkkvkt 69
                +g+tL++tG +  +  l++ ++ ++ +tl++ g ++ t
  MMETSP1325-20131115|1711_1 42 TGTTLKMTGAITGADVLDITGAITGDSTLSVGGAATGT 79
                57777777777777777777776666666666665555 PP

>> PF06715.7  Gp5 C-terminal repeat (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.045     2e+02      10      17 ..       9      16 ..       6      21 .. 0.56
   2 ?    4.3   0.5    0.0088        40       7      17 ..      29      39 ..      25      44 .. 0.77
   3 ?    4.9   0.1    0.0056        26       1      12 [.      66      77 ..      64      79 .. 0.62

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.045
                -------- CS
   PF06715.7 10 NrTvtVgG 17
                  T++VgG
  MMETSP1325-20131115|1711_1  9 ASTLSVGG 16
                44555555 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0088
                -SS-------- CS
   PF06715.7  7 VkGNrTvtVgG 17
                ++G+ T++VgG
  MMETSP1325-20131115|1711_1 29 ITGDTTLSVGG 39
                67888888888 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.0056
                -------SS--- CS
   PF06715.7  1 GnetltVkGNrT 12
                G+ tl V+G +T
  MMETSP1325-20131115|1711_1 66 GDSTLSVGGAAT 77
                566666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|1710_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-11   42.0   3.6    2.3e-10   40.5   2.5    1.7  1  PF01145.20 SPFH domain / Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   2.5   1.7e-14   2.3e-10       5     168 ..      43     211 ..      40     267 .. 0.83

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 1.7e-14
  PF01145.20   5 pgevgvvvr...fGkvkr......vlepGlhfklPfgekvtvvstrvqtldvsde.svtvptkDglnvtvdvtvryrv..sdakkliaavaqeeenlenllrrllesalrevlsqmtldeilsnrselaaelknelneqlqkygievvdvritdvdpppevkqa.lakkqaaeaeaa 168
                 p evg+++    +           ++ +G h+  P g+k++++ t++  +d+ ++ +++  tkD+++v+v+  ++y++  + + k+++++    +++ ++ ++++ +a+++ +  ++   ++++r+ + +++ +++ ++l+   +  v+v  ++vd p +++ a   k+ +++ae++
  MMETSP1325-20131115|1710_1  43 PTEVGIRYSepgN----AmlydqgIYTNGRHCLAP-GHKFKKFTTQLKFIDMMKKrRLACWTKDKQEVSVELGIYYQIdpKGVIKFYKKY---GNKYVTVWKAMATQAIKQSTKYFDTTAFFEERNTILQNISAAITSKLSSQHVLNVSVIMGSVDIPYQFETAvTTKVVTQQAEIT 211
                 5666666333222....0223467999*****666.****************999999********************666666666666...788************************************************9888999*************4444555555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       856  (0.0626097); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|1712_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 355.02
//
Query:       MMETSP1325-20131115|1713_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|1714_1  [L=370]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-26   91.6   0.0    3.5e-26   91.1   0.0    1.2  1  PF00179.21 Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.1   0.0   2.6e-30   3.5e-26       1     116 [.       9     123 ..       9     148 .. 0.84

  Alignments for each domain:
  == domain 1    score: 91.1 bits;  conditional E-value: 2.6e-30
                 HHHHHHHHHHHS-TTCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-----B-HGG..GSTTT--TT--HHHHHHHHHHHHHS--TTS- CS
  PF00179.21   1 rlqkelkelskkkpegikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvdetGeicldi..LkeekWspaltlesvLlsiqsllaepnpesp 116
                 rl+kel++l k++ e+i+a + e+ n+lew++vi+g +gtpYegg+++ k+kfp+ YP+kPP+v + t       +++ ++cl++  ++ e+W+p++++ ++L+++ s++ ++ p+  
  MMETSP1325-20131115|1714_1   9 RLRKELASLMKSPVENIEAMPLES-NILEWHYVITGTKGTPYEGGYYHGKLKFPPAYPLKPPSVLMLT--PSGRFKPNRRLCLSMsdFHPESWNPMWSVATILTGLYSFMLDSAPTLG 123
                 899********************7.*******************************************..56677788899*9664488999******************87755433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.82
# Mc/sec: 1081.28
//
Query:       MMETSP1325-20131115|1716_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-09   36.3   0.0    6.1e-09   35.9   0.0    1.2  1  PF00106.20 short chain dehydrogenase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   4.4e-13   6.1e-09      85     166 ..       2      90 ..       1      91 [. 0.87

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 4.4e-13
                 EEE---TT...-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH...HH---EEEEEE.CHHHHSSTT.HHHHHHHCHHHCCHHHHHHHH CS
  PF00106.20  85 vhnagvld...dgpleeltperlervlapkvtgawllheltld...adlgafvlfSS.vagvlgspgqaaYaaakaaldalaesrraeg 166
                 ++nag+l    + ++ +++   ler+l ++v g++ + e++l+   a++g+ +++ S  +++ +s +  +Y+a+k+a+++++  +r+++
  MMETSP1325-20131115|1716_1   2 INNAGILIydpEDDVGSIDSTVLERILTVNVVGSFRCIEAFLPllkASKGRAINVGSyFGSFAPSVNTVSYCASKHAVEGMSDGLRRRL 90 
                 89****875456778888*************************9886677777777725778999********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.32s 00:00:00.76 Elapsed: 00:00:01.03
# Mc/sec: 395.52
//
Query:       MMETSP1325-20131115|1718_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-18   65.3   0.4    1.2e-17   63.7   0.2    1.7  1  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase
  ------ inclusion threshold ------
      0.039   13.4   1.3       0.43   10.0   0.9    2.1  1  PF00272.14 Cecropin family
       0.13   12.0   0.0       0.16   11.7   0.0    1.2  1  PF05670.8  Domain of unknown function (DUF814)


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.2   2.7e-21   1.2e-17     138     240 ..       3      82 ..       1      84 [. 0.94

  Alignments for each domain:
  == domain 1    score: 63.7 bits;  conditional E-value: 2.7e-21
  PF01504.13 138 kekkkllleqlkkDtefLeslnimDYSLLlgihekeeeeeeeekkeeeekekgiesedekevlylgiIDiLqeYtlkKkleslvksllklk.gkdisvvsPkeY 240
                 +++k+++ +++ +Dt fL+  n++DYS+L+g++                        ++k++l++giID++++Y++ K++e++ ks+ ++  + ++++++P  Y
  MMETSP1325-20131115|1718_1   3 DRAKEYFNKAVLNDTLFLSIINVVDYSILVGMD------------------------EDKNELVVGIIDYMRQYDIIKRMERMGKSVGMIAgQAEPTIIQPPAY 82 
                 57899***************************6........................57899*************************999977********999 PP

>> PF00272.14  Cecropin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.9   9.4e-05      0.43       1      27 [.      53      76 ..      53      78 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 9.4e-05
  PF00272.14  1 kifKKiEkvGqnvRdAiIkAgPAvnVi 27
                +i K++E++G+ v      Ag+A+++i
  MMETSP1325-20131115|1718_1 53 DIIKRMERMGKSVGMI---AGQAEPTI 76
                788*******977444...88888888 PP

>> PF05670.8  Domain of unknown function (DUF814)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.4e-05      0.16       7      46 ..      27      68 ..      21      78 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.4e-05
   PF05670.8  7 gflvivGrdakqNeel..vkkylekndlwfHadkiggshvvi 46
                ++ ++vG d+++Ne +  ++ y++++d+    + +g s  +i
  MMETSP1325-20131115|1718_1 27 DYSILVGMDEDKNELVvgIIDYMRQYDIIKRMERMGKSVGMI 68
                599*************66699****99976666666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|1719_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|1717_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.33s 00:00:00.62 Elapsed: 00:00:00.50
# Mc/sec: 172.54
//
Query:       MMETSP1325-20131115|1723_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.0   0.1        7.5    6.2   0.0    2.3  2  PF08483.6 IstB-like ATP binding N-terminal


Domain annotation for each model (and alignments):
>> PF08483.6  IstB-like ATP binding N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0   0.00055       7.5      11      19 ..      29      37 ..      25      37 .. 0.90
   2 ?    3.7   0.0    0.0033        45      14      19 ..      65      70 ..      65      76 .. 0.93

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.00055
   PF08483.6 11 eLsFeERLG 19
                +LsF+ER +
  MMETSP1325-20131115|1723_1 29 ALSFAERVS 37
                6******86 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.0033
   PF08483.6 14 FeERLG 19
                +eERLG
  MMETSP1325-20131115|1723_1 65 HEERLG 70
                9****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 355.32
//
Query:       MMETSP1325-20131115|1726_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 1031.48
//
Query:       MMETSP1325-20131115|1727_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-17   61.5   0.0      1e-16   60.7   0.0    1.4  1  PF13442.1  Cytochrome C oxidase, cbb3-type, subunit III
    8.4e-08   32.8   1.1    2.1e-07   31.5   0.2    2.0  2  PF00034.16 Cytochrome c
  ------ inclusion threshold ------
       0.14   11.5   6.8       0.29   10.5   4.7    1.6  1  PF04535.7  Domain of unknown function (DUF588)


Domain annotation for each model (and alignments):
>> PF13442.1  Cytochrome C oxidase, cbb3-type, subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.0   2.2e-20     1e-16       2      67 .]      54     131 ..      53     131 .. 0.81

  Alignments for each domain:
  == domain 1    score: 60.7 bits;  conditional E-value: 2.2e-20
                 HCH---HHHHHCTTTTH---TT-.....--TTSHHHH........HHHHHCHHH---------TTT--HHHHHHHHHHH CS
   PF13442.1   2 aaaaGaalynanCaaCHgsggag.....pslagdawe........pdalkkiiknGkgaMPafggqlsdeeiealaaYl 67 
                 +++aGa ++ anCaaCH+ gg++     + l++ a++        p+++++ ++nGk+aMPafgg+l ++eie++aaY+
  MMETSP1325-20131115|1727_1  54 DVDAGALVFSANCAACHA-GGNNviqgeKTLRKEALStylaggfkPESVVTQVTNGKNAMPAFGGRLAEDEIENVAAYV 131
                 789**************9.555556667666666555333344446********************************8 PP

>> PF00034.16  Cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.5   1.2e+04      50      50 ..      32      32 ..      14      45 .. 0.52
   2 !   31.5   0.2   4.6e-11   2.1e-07       2      88 ..      56     132 ..      55     135 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.5
                - CS
  PF00034.16 50 p 50
                p
  MMETSP1325-20131115|1727_1 32 P 32
                1 PP

  == domain 2    score: 31.5 bits;  conditional E-value: 4.6e-11
                 --HHHHHC-TTTTT--SSS----S...--HCCHHHHT-HHHHHHHHHH------SS-GGGHHHHGGGGGGG-.---HHHHHHHHHHHH CS
  PF00034.16   2 arGkelftanCaaCHgaggggakqggapnlsgaaerysadsiaairanprqvsapavafekkpltaempark.qltdqeiadlaaYlm 88 
                 ++G+ +f anCaaCH+ g +  ++    +l+++a    ++   +           +v ++    +++mpa+  +l ++ei+++aaY+ 
  MMETSP1325-20131115|1727_1  56 DAGALVFSANCAACHAGGNNVIQGE--KTLRKEALSTYLAGGFKPE---------SVVTQVTNGKNAMPAFGgRLAEDEIENVAAYVY 132
                 678899999******8888876654..6666666555554444333.........4556666667888888899************95 PP

>> PF04535.7  Domain of unknown function (DUF588)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.7   6.3e-05      0.29      52     109 ..       3      70 ..       1      83 [. 0.84

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 6.3e-05
   PF04535.7  52 ylvvanaiaavYsllqlvlsvvslvrkk..........ersaalalllfllDqvlaylllsAasAaaa 109
                 ++ v+  ++++Ys++++   v++l+ +           +  +  a l f++D+   +l++sA++Aa  
  MMETSP1325-20131115|1727_1   3 VVHVITLVVTIYSAAEAWTPVHHLRARAapaaaaaaaaAVLTGGAPLSFAGDVDAGALVFSANCAACH 70 
                 5668899*****************988899987665554555567789*****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.66
# Mc/sec: 511.95
//
Query:       MMETSP1325-20131115|1731_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.3   11.2   3.8       0.27   11.4   2.7    1.1  1  PF09026.5  Centromere protein B dimerisation domain
       0.66    9.0   3.8       0.54    9.3   2.6    1.0  1  PF06991.6  Splicing factor, Prp19-binding domain
        3.5    6.1   6.5        3.2    6.2   4.5    1.0  1  PF04712.7  Radial spokehead-like protein


Domain annotation for each model (and alignments):
>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.7   5.8e-05      0.27      18      33 ..       3      17 ..       1      37 [. 0.51

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.8e-05
   PF09026.5 18 eeeedeeedeededee 33
                eeee+eee+e +e+ee
  MMETSP1325-20131115|1731_1  3 EEEEEEEEEE-EEEEE 17
                2222222222.22222 PP

>> PF06991.6  Splicing factor, Prp19-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.6   0.00012      0.54       7      26 ..       3      18 ..       1      43 [] 0.39

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00012
   PF06991.6  7 aeeedeseeeeeeeseeeee 26
                +eee+e e    ee+eeee+
  MMETSP1325-20131115|1731_1  3 EEEEEEEE----EEEEEEES 18
                22222222....22222222 PP

>> PF04712.7  Radial spokehead-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   4.5    0.0007       3.2     368     383 ..       3      18 ..       1      37 [. 0.38

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0007
   PF04712.7 368 deeeeeeeeeeepEeg 383
                 +eeeeeeeeeee+Ee 
  MMETSP1325-20131115|1731_1   3 EEEEEEEEEEEEEEES 18 
                 1111111111111222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       584  (0.042715); expected 273.4 (0.02)
Passed bias filter:                      515  (0.0376682); expected 273.4 (0.02)
Passed Vit filter:                        96  (0.00702165); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 214.67
//
Query:       MMETSP1325-20131115|1730_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.42s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|1734_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 651.18
//
Query:       MMETSP1325-20131115|1733_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-13   50.7   0.3      6e-12   45.2   0.2    2.2  1  PF02290.10 Signal recognition particle 14kD protein
     0.0053   16.3   0.0     0.0076   15.8   0.0    1.2  1  PF14155.1  Domain of unknown function (DUF4307)


Domain annotation for each model (and alignments):
>> PF02290.10  Signal recognition particle 14kD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.2   8.8e-16     6e-12       1      93 []      43     118 ..      43     118 .. 0.92

  Alignments for each domain:
  == domain 1    score: 45.2 bits;  conditional E-value: 8.8e-16
  PF02290.10   1 lsneeFLskLtklfqkasekggSVfltlKrlelkskkkkkkssesvsesseykiLiRatdgkkvKiSTvVkaedlekFlasYaevlkasmtgl 93 
                 l++  FL++L++l++ ++e+g  V+ tlKr++ +                e ++L+Ra++ kk KiST V+a++ ++F+ + ++++  + +gl
  MMETSP1325-20131115|1733_1  43 LDQPSFLTELSRLYNANRESG-QVTFTLKRVTSD---------------GEARCLVRARSDKK-KISTEVSAKEYARFQGELSNIVLVQTNGL 118
                 67789***************9.*******77666...............789***********.*********************99887775 PP

>> PF14155.1  Domain of unknown function (DUF4307)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.1e-06    0.0076      45      75 ..      59      90 ..      43     102 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.1e-06
   PF14155.1 45 ddstvevtfdvtrd.pgtpayCiVrAldedga 75
                + ++ +vtf+ +r  ++ +a+C VrA++ +++
  MMETSP1325-20131115|1733_1 59 NRESGQVTFTLKRVtSDGEARCLVRARSDKKK 90
                556789********9************98864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.44s 00:00:00.75 Elapsed: 00:00:00.83
# Mc/sec: 392.66
//
Query:       MMETSP1325-20131115|1724_1  [L=462]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-17   61.2   0.2    5.3e-07   28.8   0.0    3.9  3  PF00515.23 Tetratricopeptide repeat
    6.2e-15   54.4   7.8    1.4e-11   43.7   0.9    3.6  3  PF13414.1  TPR repeat
    2.9e-11   42.2   0.3     0.0012   18.4   0.0    4.2  3  PF07719.12 Tetratricopeptide repeat
    4.9e-06   26.2   0.5      0.088   12.6   0.5    3.2  2  PF13424.1  Tetratricopeptide repeat
    0.00038   19.7   0.3     0.0008   18.6   0.2    1.6  1  PF08603.6  Adenylate cyclase associated (CAP) C terminal
     0.0035   17.3   0.0        4.5    7.5   0.0    3.0  2  PF13431.1  Tetratricopeptide repeat
     0.0093   15.2   1.8      0.022   14.0   1.3    1.6  1  PF07986.7  Tubulin binding cofactor C
     0.0097   15.5   0.0        1.4    8.7   0.0    3.1  2  PF13181.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.011   15.5   3.9       0.12   12.1   0.1    2.8  3  PF13371.1  Tetratricopeptide repeat
      0.013   15.5   1.2       0.03   14.3   0.2    2.3  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      0.096   13.2  13.5        1.1    9.9   1.0    4.1  4  PF13432.1  Tetratricopeptide repeat
       0.49   10.8   4.0         35    5.0   0.0    4.4  3  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0038       4.3       7      29 ..     324     346 ..     322     349 .. 0.86
   2 !   28.8   0.0   4.6e-10   5.3e-07       3      34 .]     370     401 ..     368     401 .. 0.95
   3 !   20.7   0.0   1.7e-07   0.00019       2      31 ..     403     432 ..     402     433 .. 0.94

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0038
                 HHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23   7 lGnaylklgkydeAleyyekALe 29 
                 +Gn  +  g+y +A  +y  A+ 
  MMETSP1325-20131115|1724_1 324 MGNQSFGAGEYAQAAVHYTMAID 346
                 57777889*************96 PP

  == domain 2    score: 28.8 bits;  conditional E-value: 4.6e-10
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekALelnPnn 34 
                 ++ n+++++lklg+++ Ale+ + ++++nP++
  MMETSP1325-20131115|1724_1 370 CYSNRAACFLKLGQHERALEDADCCIKHNPSF 401
                 79****************************96 PP

  == domain 3    score: 20.7 bits;  conditional E-value: 1.7e-07
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALeln 31 
                 k ++++G+ ++ +++y eAl    +ALel+
  MMETSP1325-20131115|1724_1 403 KGHFRRGLSLHAMKRYTEALPSLGRALELE 432
                 789*************************96 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.3      0.87   9.9e+02       7      22 ..      70      85 ..      47     109 .. 0.62
   2 !   43.7   0.9   1.2e-14   1.4e-11       3      69 .]     318     399 ..     316     399 .. 0.80
   3 !   11.5   0.0   0.00014      0.15       6      33 ..     405     432 ..     402     441 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.87
   PF13414.1  7 kelGnalfkegdydeA 22
                ke++  ++ +++y+ +
  MMETSP1325-20131115|1724_1 70 KEEADTALGKNKYAAS 85
                4555555555555544 PP

  == domain 2    score: 43.7 bits;  conditional E-value: 1.2e-14
   PF13414.1   3 AealkelGnalfkegdydeAieayekAleld................pnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                 Ae  k +Gn+ f +g+y++A  +y+ A++                  p  +++y+n+A+++lklg+  e+Aled++ +++ +P
  MMETSP1325-20131115|1724_1 318 AERSKLMGNQSFGAGEYAQAAVHYTMAIDQAgtaaagqeaeagaaanPLVPICYSNRAACFLKLGQ-HERALEDADCCIKHNP 399
                 778899**********************974333343344444433388888*************6.6*******99998777 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 0.00014
   PF13414.1   6 lkelGnalfkegdydeAieayekAleld 33 
                 ++++G  l  +++y eA+  + +Alel+
  MMETSP1325-20131115|1724_1 405 HFRRGLSLHAMKRYTEALPSLGRALELE 432
                 7899999999999999999999999995 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.013        15       7      30 ..     324     347 ..     318     351 .. 0.86
   2 !   13.4   0.0   4.5e-05     0.051       2      33 ..     369     400 ..     368     401 .. 0.89
   3 !   18.4   0.0     1e-06    0.0012       2      31 ..     403     432 ..     402     433 .. 0.94

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.013
                 HHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   7 lGlayyklgdyeeAleafekAlel 30 
                 +G+  + +g+y++A+ ++  A+  
  MMETSP1325-20131115|1724_1 324 MGNQSFGAGEYAQAAVHYTMAIDQ 347
                 7888999***********999875 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 4.5e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                  ++ n++ + +klg++e+Ale+ + +++++P 
  MMETSP1325-20131115|1724_1 369 ICYSNRAACFLKLGQHERALEDADCCIKHNPS 400
                 689******************99988888885 PP

  == domain 3    score: 18.4 bits;  conditional E-value: 1e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleld 31 
                 ++++++Gl++ ++++y eAl  + +Alel+
  MMETSP1325-20131115|1724_1 403 KGHFRRGLSLHAMKRYTEALPSLGRALELE 432
                 689*************************95 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.5   7.7e-05     0.088      24      67 ..     344     389 ..     322     396 .. 0.76
   2 !    9.6   0.0   0.00067      0.76       8      34 ..     405     431 ..     398     439 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7.7e-05
   PF13424.1  24 Alelyekalel.lrelgd.dhpdtaralnnlanlylalgdydeAle 67 
                 A++   +a +   +e+g  ++p +  ++ n a ++l+lg+++ Ale
  MMETSP1325-20131115|1724_1 344 AIDQAGTAAAGqEAEAGAaANPLVPICYSNRAACFLKLGQHERALE 389
                 5555556666666677754688889999999999999999998886 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00067
   PF13424.1   8 lnnlalvlrrlgdydeAlelyekalel 34 
                 +++ +l+l+++++y eAl  + +alel
  MMETSP1325-20131115|1724_1 405 HFRRGLSLHAMKRYTEALPSLGRALEL 431
                 677888999999999999999999987 PP

>> PF08603.6  Adenylate cyclase associated (CAP) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.2     7e-07    0.0008      12     102 ..     116     213 ..     107     283 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 7e-07
                 EEEEE-BBS-S.S-EEEE--TT-EEEE-EEEEEEEEEE-...-BSEEEEEEEEEEEEEES..-B----EEEEEE----EESS-.-SEEEEES-B---E CS
   PF08603.6  12 kwvvenfedek.elvleevelkqsvyifkCknstiqikg...Kvnaisldnckkvslvvd..slvssvevvnsksvkvqvlgk.vptisidktdgvqi 102
                 k+ v   ++++  l+   +  k +v   +C+++t +++     +  +++++c  + + ++   + s +ev  ++++ ++ ++  + t+++d tdgv++
  MMETSP1325-20131115|1724_1 116 KFEVADETGATtTLEQAALAGKRVVLFKNCTDCTFELPAalqGMIKVFVEGCVGCTIALKckLVTSHLEVSHCENLTLNLEEAmIHTVQVDLTDGVTL 213
                 666666666553455555667899999*********99722245679********999863257799*************875379*********987 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0     0.004       4.5       7      33 ..     362     388 ..     357     389 .. 0.87
   2 !    6.4   0.0    0.0092        11       5      33 ..     394     422 ..     394     423 .. 0.95

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.004
   PF13431.1   7 eldPnnadaynnLAelllnnGdleeAe 33 
                 + +P  +  y n+A ++l++G++e+A+
  MMETSP1325-20131115|1724_1 362 AANPLVPICYSNRAACFLKLGQHERAL 388
                 678888999****************97 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0092
   PF13431.1   5 aleldPnnadaynnLAelllnnGdleeAe 33 
                 +++++P  +  ++++++ l++ +++ eA+
  MMETSP1325-20131115|1724_1 394 CIKHNPSFVKGHFRRGLSLHAMKRYTEAL 422
                 8************************9995 PP

>> PF07986.7  Tubulin binding cofactor C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   1.3   1.9e-05     0.022       6      52 ..     142     193 ..     137     206 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.9e-05
                 E-S-BS-EEEE...----S-EEEES-BS-EEE-..---SS-EEEES-BS-EE CS
   PF07986.7   6 lenlsnctiyl...ldplssltidnckdctivl..gpvsgsvfiedcencki 52 
                  +n+++ct  l   l+ + +++++ c+ cti+l    v + + +++cen+++
  MMETSP1325-20131115|1724_1 142 FKNCTDCTFELpaaLQGMIKVFVEGCVGCTIALkcKLVTSHLEVSHCENLTL 193
                 4677777777766666666777777777777753255777777777777765 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.08        92       4      22 ..     371     389 ..     366     399 .. 0.87
   2 !    8.7   0.0    0.0012       1.4       2      31 ..     403     432 ..     402     436 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.08
                 TTT---HHHHTT-HHHHHH CS
   PF13181.1   4 yynlGdiYrqlGdydkAke 22 
                 y n++ ++++lG+++ A+e
  MMETSP1325-20131115|1724_1 371 YSNRAACFLKLGQHERALE 389
                 449999***********98 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0012
                 --TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelk 31 
                 k ++++G+ +  +++y +A+ +l +alel 
  MMETSP1325-20131115|1724_1 403 KGHFRRGLSLHAMKRYTEALPSLGRALELE 432
                 5689************************97 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.2       9.2   1.1e+04      43      64 ..     332     353 ..     330     360 .. 0.71
   2 ?    8.6   0.0    0.0013       1.4      34      60 ..     373     399 ..     364     405 .. 0.92
   3 ?   12.1   0.1   0.00011      0.12      10      60 ..     383     433 ..     383     448 .. 0.87

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 9.2
   PF13371.1  43 gclaaAaedLeaflelcpdapd 64 
                 g++a+Aa  ++ +++++ +a +
  MMETSP1325-20131115|1724_1 332 GEYAQAAVHYTMAIDQAGTAAA 353
                 7788888888888888876655 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0013
   PF13371.1  34 DrGlllaqlgclaaAaedLeaflelcp 60 
                  r+ +  +lg+++ A+ed + ++++ p
  MMETSP1325-20131115|1724_1 373 NRAACFLKLGQHERALEDADCCIKHNP 399
                 79*********************9998 PP

  == domain 3    score: 12.1 bits;  conditional E-value: 0.00011
   PF13371.1  10 dferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcp 60 
                 ++erAL+ ++  +  +P  +  +  rGl l+ + ++++A+  L ++lel+ 
  MMETSP1325-20131115|1724_1 383 QHERALEDADCCIKHNPSFVKGHFRRGLSLHAMKRYTEALPSLGRALELES 433
                 5799*******************************************8775 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   2.6e-05      0.03      28      83 ..     371     427 ..     280     428 .. 0.87
   2 ?   -2.6   0.0       5.1   5.8e+03       3      18 ..     441     456 ..     439     459 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2  28 lyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83 
                 + + A c++++g+++rA+e  +   ++++s ++ ++  + +l+++++y eA+  L++
  MMETSP1325-20131115|1724_1 371 YSNRAACFLKLGQHERALEDADCcIKHNPSFVKGHFRRGLSLHAMKRYTEALPSLGR 427
                 556799***********999966877777779999999**************99987 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 5.1
                 T-HHHHHHHHHHHCCC CS
   PF12895.2   3 hnyknAlflaekllae 18 
                 +++++A+ +ae  la+
  MMETSP1325-20131115|1724_1 441 KQINDAIRFAEAKLAS 456
                 6889999999987776 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.5       4.3   4.9e+03      50      50 ..      93      93 ..      71     118 .. 0.54
   2 ?    0.1   1.1       1.1   1.2e+03      29      58 ..     316     345 ..     300     352 .. 0.61
   3 ?    9.9   1.0   0.00094       1.1      18      60 ..     355     397 ..     323     400 .. 0.78
   4 ?    9.4   0.0    0.0013       1.5      25      58 ..     396     430 ..     394     437 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 4.3
   PF13432.1 50 A 50
                +
  MMETSP1325-20131115|1724_1 93 E 93
                1 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 1.1
   PF13432.1  29 eaaeallllaeallrlgrldeAaallraal 58 
                   ae + l +   + +g++++Aa  +  a+
  MMETSP1325-20131115|1724_1 316 AEAERSKLMGNQSFGAGEYAQAAVHYTMAI 345
                 556666666666677777777775555555 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00094
   PF13432.1  18 aaleaalalaPeaaeallllaeallrlgrldeAaallraalal 60 
                 +  ea  a++P+ +  + ++a ++l+lg++++A++  +  ++ 
  MMETSP1325-20131115|1724_1 355 QEAEAGAAANPLVPICYSNRAACFLKLGQHERALEDADCCIKH 397
                 4556667778***********************9666555555 PP

  == domain 4    score: 9.4 bits;  conditional E-value: 0.0013
   PF13432.1  25 alaPeaaeallllaeallrlgrldeAa.allraal 58 
                 + +P  +  +++++ +l++++r+ eA+  l ra+ 
  MMETSP1325-20131115|1724_1 396 KHNPSFVKGHFRRGLSLHAMKRYTEALpSLGRALE 430
                 567999999******************88888774 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.78   8.8e+02      11      29 ..     329     347 ..     315     349 .. 0.75
   2 ?    2.6   0.0      0.18     2e+02       5      21 ..     373     389 ..     370     392 .. 0.87
   3 ?    5.0   0.0     0.031        35       3      28 ..     405     430 ..     403     435 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.78
                 HHHHHHHHHHHHHHHHHHH CS
   PF13174.1  11 yklgdtdeAlealerlike 29 
                 + +g++++A   +   i++
  MMETSP1325-20131115|1724_1 329 FGAGEYAQAAVHYTMAIDQ 347
                 33479****9999998876 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.18
                 HHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAle 21 
                 ++a +++klg++++Ale
  MMETSP1325-20131115|1724_1 373 NRAACFLKLGQHERALE 389
                 6899****99*****97 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.031
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   3 lyklalsyyklgdtdeAlealerlik 28 
                  ++++ls+ ++++++eAl  l r ++
  MMETSP1325-20131115|1724_1 405 HFRRGLSLHAMKRYTEALPSLGRALE 430
                 699*******99******99988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1089  (0.0796518); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.90u 0.39s 00:00:01.29 Elapsed: 00:00:00.66
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|1735_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-18   65.4   0.0    2.1e-17   63.1   0.0    1.9  2  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
    3.1e-16   59.7   0.0    3.7e-16   59.5   0.0    1.0  1  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
     0.0047   16.8   0.0      0.008   16.1   0.0    1.4  2  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.012   15.1   0.0      0.016   14.7   0.0    1.2  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
      0.014   14.2   0.0      0.021   13.6   0.0    1.2  1  PF13434.1  L-lysine 6-monooxygenase (NADPH-requiring)
      0.016   14.7   0.0       0.04   13.5   0.0    1.5  1  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus


Domain annotation for each model (and alignments):
>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.68   1.6e+03      42      58 ..      62      78 ..      52      82 .. 0.77
   2 !   63.1   0.0   9.3e-21   2.1e-17       1      79 [.     136     215 ..     136     216 .. 0.95

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.68
                HHHHHHHHHHHTTEEEE CS
  PF00070.22 42 iakilqkklekngievl 58
                +  i+q+ le+ g++++
  MMETSP1325-20131115|1735_1 62 LNGIYQRNLENSGVTLI 78
                56678999999999987 PP

  == domain 2    score: 63.1 bits;  conditional E-value: 9.3e-21
                 EEEEE---HHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEETTEEEEEEEESEEE.EEEEEES CS
  PF00070.22   1 rvvvvGGGyiGlElAaalaklgkkVtvierrdrllraldeeiakilqkklekngievllntkveeiegsadg.vevkled 79 
                 +v+v+G+Gyi++ElA+++++lg++++++ r+++ lr +d+ ++++l k +++ g+ v+ +++++++++ adg ++++le+
  MMETSP1325-20131115|1735_1 136 KVAVIGAGYIAVELAGIFQELGSDTSLFVRGEKALRRFDPILSDNLDKAMKDAGMSVVPGSTPKAVTKAADGtLSLELEN 215
                 69*********************************************************************966677765 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.0   1.6e-19   3.7e-16      31     170 ..       4     213 ..       2     219 .. 0.82

  Alignments for each domain:
  == domain 1    score: 59.5 bits;  conditional E-value: 1.6e-19
                 SSSSTBTSGGHHHHHHHHHHHHHHHHHHTSH......................HHHHHHHHCTCEEEHCHEEEEEETTTTEEEEEEEEEEEEEETEEEEEEESEEEE----B----TGCCHTEEEC.SSHHHHHHHHHHCSTTTEEEEE-............................................................-GGGCHHSS--B CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................................xxxxxxxxxxxx RF
   PF07992.9  31 eggtcvnrgclpkkllvevaegreeleelal......................kvvdelekagieilleknvvkidsgskkvvqeagavkadekgkgrdikydklviAtGarprtlgipgvevailargvedsdeilellekpkkvvvvG............................................................tkllaekagvel 170
                 +ggtcvn+gc+pkk++ ++a ++e ++ +++                       +v++l ++ ++++le++ v+++ g +++  ++     d+      +++d++ iA+G++  +++ipg e+       +dsd ++ l+e+pkkv+v+G                                                            tk +++++ +el
  MMETSP1325-20131115|1735_1   4 LGGTCVNVGCVPKKVMFNAAMVHEMIHAAKQygfddcdkgptfnwanikemrdFYVKRL-NGIYQRNLENSGVTLIEGLGAFNGPNSIKVGDT-----VYTADHINIAVGGKTVMPDIPGIEH------CIDSDGFFLLEEQPKKVAVIGagyiavelagifqelgsdtslfvrgekalrrfdpilsdnldkamkdagmsvvpgstpkavTKAADGTLSLEL 213
                 79**************9998887666544448*****************9996555566.999999**************9855554433434.....5*********************754......899***********************9999999999999999999999999999999888777666666666666666665555446666666 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   3.5e-06     0.008     115     198 ..      88     165 ..      39     170 .. 0.84
   2 ?   -3.0   0.0       2.5   5.7e+03      85     122 ..     178     216 ..     175     220 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.5e-06
   PF13738.1 115 fevrvtdgrevrakalvlatgavskpktlglpgsadkeavhleevlepedlkgkrvvVvGgghsAidallnLldlgqkltwitr 198
                  +++v d   ++a+++ +a+g+  k+ ++++pg   ++++ ++ ++  e  ++k+v+V+G+g  A++ +    +lg++++++ r
  MMETSP1325-20131115|1735_1  88 NSIKVGDT-VYTADHINIAVGG--KTVMPDIPG--IEHCIDSDGFFLLE-EQPKKVAVIGAGYIAVELAGIFQELGSDTSLFVR 165
                 45777777.899*********7..9999*****..6799***9999986.59*******************9999999999987 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 2.5
   PF13738.1  85 sayledvarrlglkvrlstrvteveregdr.fevrvtdg 122
                 s+ l++ +++ g+ v  +++ ++v+ ++d+  ++++++g
  MMETSP1325-20131115|1735_1 178 SDNLDKAMKDAGMSVVPGSTPKAVTKAADGtLSLELENG 216
                 678888888888888888888888877555466666666 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   7.1e-06     0.016       1      56 [.     136     191 ..     136     215 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7.1e-06
                 EEEEE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHHHHHTTCH..... CS
  PF02737.13   1 kvaVvGaGtmGagiAavfaragleVvlvdiseealekalerieksleklvekgklk 56 
                 kvaV+GaG +  ++A +f + g ++ l+ + e+al++    ++++l+k+++ + ++
  MMETSP1325-20131115|1735_1 136 KVAVIGAGYIAVELAGIFQELGSDTSLFVRGEKALRRFDPILSDNLDKAMKDAGMS 191
                 79*************************************99999999998877665 PP

>> PF13434.1  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   9.4e-06     0.021     144     206 ..      95     150 ..      87     168 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 9.4e-06
   PF13434.1 144 eellarnlvlgtGtepylPealkklegkervfhsseylerkeellkkkriavvGsGqSaaeif 206
                 + ++a ++ +++G++  +P++       e+++ s+ +   +   +++k++av+G+G  a e++
  MMETSP1325-20131115|1735_1  95 TVYTADHINIAVGGKTVMPDIPG----IEHCIDSDGFFLLE---EQPKKVAVIGAGYIAVELA 150
                 6899***************9876....3789***9999875...79***********999864 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.7e-05      0.04       1      38 [.     136     173 ..     136     176 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.7e-05
                 EEEEE-------HHHHHHHTTEEEEEEE-S-HHHHHHH CS
  PF01210.18   1 kvavlGaGswGtalAkvlaenghevrlWvreeklieei 38 
                 kvav+GaG ++  lA +++e g++++l+vr ek ++++
  MMETSP1325-20131115|1735_1 136 KVAVIGAGYIAVELAGIFQELGSDTSLFVRGEKALRRF 173
                 89****************************99887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 1059.19
//
Query:       MMETSP1325-20131115|1740_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|1737_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.003   17.6   0.4      0.042   13.8   0.0    2.3  2  PF00264.15 Common central domain of tyrosinase


Domain annotation for each model (and alignments):
>> PF00264.15  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   3.1e-06     0.042     171     203 ..      76     120 ..      10     120 .. 0.74
   2 ?    2.0   0.0     0.013   1.8e+02     198     217 ..     219     238 ..     173     313 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.1e-06
                 ....................HHHHHHHH--...-----TTGGGGS CS
  PF00264.15 171 a..........gksalslespHnavHvwvGg..GhmgdvavaafD 203
                 +          +  ++   spH+ vHvwvGg  G+  d ++++fD
  MMETSP1325-20131115|1737_1  76 WaltfkkktwyDWIWDVSYSPHGPVHVWVGGmgGDCIDADISGFD 120
                 44444444454555667789**********988888999999998 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.013
                 TGGGGSTHHHHHHHHHHHHH CS
  PF00264.15 198 avaafDPiFflHHaniDrlw 217
                 a+++ +  F+  H  +Drl 
  MMETSP1325-20131115|1737_1 219 AASPVEASFWPIHPTLDRLL 238
                 56788888888888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.76
# Mc/sec: 1065.75
//
Query:       MMETSP1325-20131115|1742_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 196.50
//
Query:       MMETSP1325-20131115|1744_1  [L=275]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-14   53.8   8.4    1.2e-08   34.9   0.3    3.1  3  PF00892.15 EamA-like transporter family
     0.0095   16.0   1.7     0.0095   16.0   1.2    3.0  3  PF13536.1  Multidrug resistance efflux transporter
  ------ inclusion threshold ------
       0.41   10.4   7.8       0.52   10.0   0.5    3.0  3  PF11003.3  Protein of unknown function (DUF2842)


Domain annotation for each model (and alignments):
>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.3   2.6e-12   1.2e-08      62     124 ..      23      85 ..       4      86 .. 0.91
   2 !    5.1   0.2    0.0043        20       4      42 ..     132     171 ..     119     182 .. 0.76
   3 !   17.9   0.1   4.6e-07    0.0021      53     118 ..     211     275 .]     184     275 .] 0.84

  Alignments for each domain:
  == domain 1    score: 34.9 bits;  conditional E-value: 2.6e-12
  PF00892.15  62 lgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvlll 124
                 + +++++ + f+a+++t+ ++a  +++++Pv+t ++s+l+lg+  + ++++ ++ +l+Gv+++
  MMETSP1325-20131115|1744_1  23 MMGGIAMTCAFFAVQNTNMAVANTLMFTVPVWTGVFSYLVLGKLWKRWDVALAITSLCGVMMV 85 
                 4579********************************************************997 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0043
  PF00892.15   4 aiyfvlskkllesvspltitayrlliagi.llilllfllr 42 
                 +++++l    l++ s++++t ++++  ++  l++ l+l+ 
  MMETSP1325-20131115|1744_1 132 GAAAILINTHLREESMVSMTLLQMVYIFMvGLFFSLTLPM 171
                 5556666666777889999999999999877777776655 PP

  == domain 3    score: 17.9 bits;  conditional E-value: 4.6e-07
  PF00892.15  53 ilallllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlil 118
                   +l+ l  +g+v  ++l + ++  +  s++++ +++e++++ l+ +++l+  l+++q++g+++i+
  MMETSP1325-20131115|1744_1 211 M-FLVTLLGIGMVGMQGLRNGGMAVSRDSTVVIALYFEVALAFLWTAAILKDDLNVYQFVGCAVIV 275
                 3.444445556899999*********************************************9986 PP

>> PF13536.1  Multidrug resistance efflux transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.2   2.1e-06    0.0095      41     104 ..      22      85 ..       8      88 .. 0.88
   2 ?   -0.8   0.5      0.33   1.5e+03      85      98 ..     147     160 ..     114     172 .. 0.45
   3 ?    3.3   0.1     0.018        80      39      97 ..     216     274 ..     199     275 .] 0.75

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.1e-06
   PF13536.1  41 gllgfglfyalltlAakhapglva.aitaltpllaallslllfkeklpkrellaslliliGvvlm 104
                 g+ g+ ++++  ++A++ +   va  + ++ p+++ ++s l++++ +    +  ++  l+Gv+++
  MMETSP1325-20131115|1744_1  22 GMMGG-IAMTCAFFAVQNTNMAVAnTLMFTVPVWTGVFSYLVLGKLWKRWDVALAITSLCGVMMV 85 
                 66665.9*************9888688999*********************************98 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.33
   PF13536.1  85 klpkrellasllil 98 
                  +++  l ++ + +
  MMETSP1325-20131115|1744_1 147 MVSMTLLQMVYIFM 160
                 23333333333333 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.018
   PF13536.1  39 lagllgfglfyalltlAakhap.glvaaitaltpllaallslllfkeklpkrellaslli 97 
                 l g +g++    l   ++++++ ++v++++   ++la l    ++k  l+  + + +++i
  MMETSP1325-20131115|1744_1 216 LLG-IGMVGMQGLRNGGMAVSRdSTVVIALYFEVALAFLWTAAILKDDLNVYQFVGCAVI 274
                 223.34445577888888899877999999999999999999999999999999999888 PP

>> PF11003.3  Protein of unknown function (DUF2842)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.5   0.00012      0.52      18      47 ..      38      67 ..      21      68 .. 0.80
   2 ?    3.8   0.1      0.01        45       5      28 ..     146     169 ..     143     176 .. 0.85
   3 ?   -1.9   0.1      0.62   2.8e+03      30      47 ..     236     254 ..     231     258 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00012
   PF11003.3 18 vlavtlaslllarepilvqlvvYvvlGvlW 47
                   +++a+ l+ + p++  ++ Y+vlG lW
  MMETSP1325-20131115|1744_1 38 NTNMAVANTLMFTVPVWTGVFSYLVLGKLW 67
                5679999*********************** PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.01
   PF11003.3   5 glvlLlvllvvYivlavtlaslll 28 
                 ++v +++l +vYi+++  + sl+l
  MMETSP1325-20131115|1744_1 146 SMVSMTLLQMVYIFMVGLFFSLTL 169
                 7999***********999888765 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 0.62
   PF11003.3  30 repilvqlvvY.vvlGvlW 47 
                 r++ +v ++++ v+l +lW
  MMETSP1325-20131115|1744_1 236 RDSTVVIALYFeVALAFLW 254
                 5566666666645566666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.53
# Mc/sec: 1243.39
//
Query:       MMETSP1325-20131115|1746_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       400  (0.0292569); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.57
# Mc/sec: 1177.52
//
Query:       MMETSP1325-20131115|1741_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.9   0.0       0.14   12.1   0.0    1.8  1  PF00041.16 Fibronectin type III domain


Domain annotation for each model (and alignments):
>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     1e-05      0.14       3      82 ..       8      93 ..       6      96 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1e-05
                BEEEEEECECSSEEEEEEE-BSHHSSTBSEEEEEEEEE-TTC...........CEEEEEECCTTSEEEEES--TT-EEEEEEEEEC----- CS
  PF00041.16  3 PenlsvsevtstsltlsWsppkdgggpitgYeveyrekggge...........ewkeftvprtttsvtltgLkpgteYefrVqavngageg 82
                P  +   +  +ts++  W+p      p+ +Y++ey+e  + +           + k    ++  +  t+++L+p ++Y +r+ a++++ e+
  MMETSP1325-20131115|1741_1  8 PPKPEWQDADETSISCVWDPD-----PDCSYRLEYKEYPDAWedcmsieipkgQGKADAGDGKDSGNTIEELNPTSTYCLRLVAIKDGVES 93
                7778889999***********.....9********988777786766666654333333333344899***************99988555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.64
# Mc/sec: 715.16
//
Query:       MMETSP1325-20131115|1748_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0029   17.0  10.5      0.035   13.6   0.9    2.6  2  PF00612.22 IQ calmodulin-binding motif
  ------ inclusion threshold ------
       0.93    9.2   5.7       0.22   11.2   1.5    1.7  2  PF10385.4  RNA polymerase beta subunit external 1 domain
        1.1    8.3  11.6        1.3    8.2   8.0    1.0  1  PF13598.1  Domain of unknown function (DUF4139)
          2    7.8   5.2        2.4    7.6   3.6    1.0  1  PF12470.3  Suppressor of Fused Gli/Ci N terminal binding domain


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.9     1e-05     0.035       2      20 ..      37      55 ..      36      56 .. 0.86
   2 !    7.9   1.6   0.00068       2.3       1      14 [.      74      87 ..      74      91 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1e-05
                HHHHHHHHHHHHHHHHCHC CS
  PF00612.22  2 kaaikIQaawRgylaRkry 20
                +a +kIQa++Rg  aR + 
  MMETSP1325-20131115|1748_1 37 HASTKIQARYRGSAARAQV 55
                689*********9999765 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00068
                HHHHHHHHHHHHHH CS
  PF00612.22  1 rkaaikIQaawRgy 14
                ++aa++IQa+ Rg 
  MMETSP1325-20131115|1748_1 74 TAAAVRIQARQRGR 87
                58**********96 PP

>> PF10385.4  RNA polymerase beta subunit external 1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.5   6.4e-05      0.22      20      60 ..      19      58 ..      18      60 .. 0.86
   2 ?   -1.8   0.1      0.75   2.6e+03      33      50 ..      69      86 ..      64      88 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.4e-05
                TTTTS-EE-TTS-B----B--.SSEEEE----EEEE-CCC- CS
   PF10385.4 20 eEekyvIAqanspldedgkivedtViaRrkgefllvppeeV 60
                +Ee+   Aqa+++ +++ +    ++ aR++g+ + ++++eV
  MMETSP1325-20131115|1748_1 19 QEEEQAQAQAEAEAQAEAH-ASTKIQARYRGSAARAQVKEV 58
                7889999999999999954.5699*************9999 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.75
                B----B--.SSEEEE--- CS
   PF10385.4 33 ldedgkivedtViaRrkg 50
                ++e ++    ++ aR++g
  MMETSP1325-20131115|1748_1 69 VEEAETAAAVRIQARQRG 86
                555555556677777665 PP

>> PF13598.1  Domain of unknown function (DUF4139)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   8.0   0.00037       1.3      80     161 ..       5      83 ..       1      87 [. 0.69

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00037
   PF13598.1  80 rareaapaaraaasaeasaaeadeeeaaaeeaavaeaaeveksglsvtfkipgpvsvpsdgeahrvtiatetlpaeleyvav 161
                 r+re+ +++++++++e++ a+a++e++a++ea  +++ ++   g++++ ++++   v+++ +++r+++++ ++ a ++++a+
  MMETSP1325-20131115|1748_1   5 RQREQEQKQEEKRRQEEEQAQAQAEAEAQAEAHASTKIQARYRGSAARAQVKE---VAASRDRARLEVEEAETAAAVRIQAR 83 
                 33333334444444444455555555555555555667788899999999985...********************999886 PP

>> PF12470.3  Suppressor of Fused Gli/Ci N terminal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.6   0.00069       2.4      45     126 ..      10      90 ..       1      91 [. 0.60

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00069
   PF12470.3  45 dkdteeirealseskeikeeaslpptlsqssnslakdsevsaadvpselvrtrqLegielklaqeaakllllairdRlrHGR 126
                 ++++ee r+  +e+ + + ea  +     s++ +a+ + ++a   ++e+   r    +e++ a++aa+ + +  r+R rHGR
  MMETSP1325-20131115|1748_1  10 EQKQEEKRRQEEEQAQAQAEAEAQAEAHASTKIQARYRGSAARAQVKEVAASRDRARLEVEEAETAAA-VRIQARQRGRHGR 90 
                 23333333333333333333333333333333344447888888889999999999999988877766.67788*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2343  (0.171372); expected 273.4 (0.02)
Passed bias filter:                     1180  (0.0863078); expected 273.4 (0.02)
Passed Vit filter:                       247  (0.0180661); expected 13.7 (0.001)
Passed Fwd filter:                        34  (0.00248683); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.45s 00:00:01.11 Elapsed: 00:00:00.56
# Mc/sec: 386.78
//
Query:       MMETSP1325-20131115|1747_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-42  142.3   4.2    4.7e-42  142.1   2.9    1.0  1  PF03297.10 S25 ribosomal protein
  ------ inclusion threshold ------
      0.047   13.0   0.7       0.12   11.6   0.5    1.7  1  PF00392.16 Bacterial regulatory proteins, gntR family
       0.05   13.2   0.0      0.072   12.6   0.0    1.3  1  PF09397.5  Ftsk gamma domain
       0.11   12.0   0.1       0.18   11.3   0.0    1.3  1  PF01047.17 MarR family
       0.21   10.7   4.5       0.26   10.4   3.1    1.3  1  PF05236.9  Transcription initiation factor TFIID component TAF4 family


Domain annotation for each model (and alignments):
>> PF03297.10  S25 ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.1   2.9   1.7e-45   4.7e-42       1     105 []       1     106 [.       1     106 [. 0.98

  Alignments for each domain:
  == domain 1    score: 142.1 bits;  conditional E-value: 1.7e-45
  PF03297.10   1 mppkk.kktkeakaaaasaggkakkKkWskgkvkdklnnavlldkatydkllkevpkyklitpsvlsdrlkingslArkalkeLeekglikevvkhsaqkiYTrat 105
                 mppk+ +k+keak+aaa+aggk kkKkWskgkv++k++n vl+++++y++l +evpk+klitps l++rlki gslAr+a+keLe++++ik+++ hs+q +YTrat
  MMETSP1325-20131115|1747_1   1 MPPKTqQKSKEAKMAAAMAGGKGKKKKWSKGKVREKVANKVLFEEELYERLKNEVPKMKLITPSALVERLKIGGSLARAAIKELEQEEMIKRLSYHSSQWVYTRAT 106
                 99*99678999*********************************************************************************************96 PP

>> PF00392.16  Bacterial regulatory proteins, gntR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.5   4.5e-05      0.12      26      57 ..      62      93 ..      43      97 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.5e-05
  PF00392.16 26 sereLaaefgVsrttvReALrrLeaeglverr 57
                + ++L+++++++ +  R A+++Le+e ++ r 
  MMETSP1325-20131115|1747_1 62 TPSALVERLKIGGSLARAAIKELEQEEMIKRL 93
                66799***********************9985 PP

>> PF09397.5  Ftsk gamma domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.6e-05     0.072       5      54 ..      44      93 ..      41     106 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.6e-05
   PF09397.5  5 eDelydeavelVveqqkaSiSllQRrlriGYnrAarlieqlEeegiVgpa 54
                e+ely+  ++ V + + +  S l  rl+iG + A   i +lE+e ++   
  MMETSP1325-20131115|1747_1 44 EEELYERLKNEVPKMKLITPSALVERLKIGGSLARAAIKELEQEEMIKRL 93
                689*****************************************999765 PP

>> PF01047.17  MarR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.7e-05      0.18      18      50 ..      61      93 ..      56      99 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 6.7e-05
                EEHHHHHHHCSS-HHHHHHHHHHHHHTTSEEEE CS
  PF01047.17 18 lsvseLakklgvsrstvtrvldrLEkkGlieRs 50
                ++ s+L ++l++  s +  ++++LE++++i+R 
  MMETSP1325-20131115|1747_1 61 ITPSALVERLKIGGSLARAAIKELEQEEMIKRL 93
                688999**************************7 PP

>> PF05236.9  Transcription initiation factor TFIID component TAF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.1   9.6e-05      0.26     169     204 ..       6      41 ..       3      96 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 9.6e-05
   PF05236.9 169 eirhRaANatAlaaigprkKyklmaesarssaggqg 204
                 + + ++A ++A++a g+ kK k+++ ++r + ++++
  MMETSP1325-20131115|1747_1   6 QQKSKEAKMAAAMAGGKGKKKKWSKGKVREKVANKV 41 
                 77899********************99996666444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       597  (0.0436659); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 537.96
//
Query:       MMETSP1325-20131115|1736_1  [L=474]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-23   81.7   7.1    8.8e-15   54.7   0.5    2.5  2  PF12796.2  Ankyrin repeats (3 copies)
    9.5e-18   62.9   5.5    5.1e-05   22.7   0.2    3.9  4  PF00023.25 Ankyrin repeat
    1.2e-15   56.9   2.6    5.6e-07   29.4   0.1    2.8  2  PF13857.1  Ankyrin repeats (many copies)
    1.7e-15   55.4   1.3    9.7e-05   22.1   0.0    4.0  3  PF13606.1  Ankyrin repeat
      2e-13   50.3   1.4    1.2e-06   28.7   0.1    3.8  4  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.5   3.2e-18   8.8e-15       1      88 [.     122     214 ..     122     215 .. 0.96
   2 !   38.5   0.6   3.4e-13   9.4e-10      11      68 ..     199     260 ..     197     267 .. 0.87

  Alignments for each domain:
  == domain 1    score: 54.7 bits;  conditional E-value: 3.2e-18
   PF12796.2   1 LhlAaengnlelvklLle.kgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                 L +Aa+ g+  +v+++l+ k+ +v+     g t+L  Aae+++  i++ L++aga++++++++g t+L++A+++    +vk+L+ekga++++r
  MMETSP1325-20131115|1736_1 122 LQNAARDGDKGTVMKILDgKKENVNAkgfmGFTALIQAAENNHGPICNSLINAGANIEDTTNDGDTALIMAASHAAMSAVKVLVEKGAKLEAR 214
                 789***************9******88888889*******************************************************99876 PP

  == domain 2    score: 38.5 bits;  conditional E-value: 3.4e-13
   PF12796.2  11 elvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvr 68 
                 ++vk L+ekga+++     g+t++ +Aa++ + e+v++L+e+ga+  a++++g+t L l + 
  MMETSP1325-20131115|1736_1 199 SAVKVLVEKGAKLEArgfnGNTAIIAAAQNAHDEVVDYLIENGANEKATNNNGKTGLVLLID 260
                 58999999999999999999999999999999999999999999999999999999988765 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0         3   8.1e+03      10      31 ..     126     148 ..     125     149 .. 0.65
   2 !   20.0   0.1   1.4e-07   0.00038       2      33 .]     152     183 ..     151     183 .. 0.93
   3 !   20.6   0.0   8.5e-08   0.00023       1      31 [.     184     214 ..     184     216 .. 0.96
   4 !   22.7   0.2   1.9e-08   5.1e-05       1      33 []     217     249 ..     217     249 .. 0.94

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 3
                 HHTTHHHHHHHHHH.TTSSTTHB CS
  PF00023.25  10 alrgnlevvklLls.qGAdlnaq 31 
                 a+ g++  v   l+ +  ++na+
  MMETSP1325-20131115|1736_1 126 ARDGDKGTVMKILDgKKENVNAK 148
                 55566666666666688899986 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 1.4e-07
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 GfT+L  Aa++++  ++  L+++GA++  +++
  MMETSP1325-20131115|1736_1 152 GFTALIQAAENNHGPICNSLINAGANIEDTTN 183
                 9*************************987775 PP

  == domain 3    score: 20.6 bits;  conditional E-value: 8.5e-08
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaq 31 
                 dG+T+L +Aa++  ++ vk L+++GA l a+
  MMETSP1325-20131115|1736_1 184 DGDTALIMAASHAAMSAVKVLVEKGAKLEAR 214
                 8**************************9997 PP

  == domain 4    score: 22.7 bits;  conditional E-value: 1.9e-08
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 +G+T+   Aa++ + evv +L+++GA+  a+++
  MMETSP1325-20131115|1736_1 217 NGNTAIIAAAQNAHDEVVDYLIENGANEKATNN 249
                 7**************************888775 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.1     2e-10   5.6e-07       5      56 .]     140     192 ..     137     192 .. 0.93
   2 !   26.8   0.1   1.4e-09   3.7e-06       1      51 [.     204     253 ..     204     256 .. 0.95

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 2e-10
   PF13857.1   5 g.padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 g  ++vna    g+t+L +Aa++++ +++  L+++ga++  +++dg+tal +A
  MMETSP1325-20131115|1736_1 140 GkKENVNAKGFMGFTALIQAAENNHGPICNSLINAGANIEDTTNDGDTALIMA 192
                 447899999999**************************************988 PP

  == domain 2    score: 26.8 bits;  conditional E-value: 1.4e-09
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdglt 51 
                 L+e+g a + a+  +gnt++  Aa + + evv++L+++ga+ ++++++g t
  MMETSP1325-20131115|1736_1 204 LVEKG-AKLEARGFNGNTAIIAAAQNAHDEVVDYLIENGANEKATNNNGKT 253
                 78999.99999999**********************************987 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   5.9e-05      0.16       2      28 ..     152     178 ..     151     180 .. 0.95
   2 !   17.6   0.0   9.8e-07    0.0027       1      28 [.     184     211 ..     184     213 .. 0.93
   3 !   22.1   0.0   3.5e-08   9.7e-05       1      27 [.     217     243 ..     217     246 .. 0.96

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.9e-05
   PF13606.1   2 GnTpLhlAasngrielveaLlengadi 28 
                 G T+L  Aa+n++  +++ L+++ga+i
  MMETSP1325-20131115|1736_1 152 GFTALIQAAENNHGPICNSLINAGANI 178
                 89***********************98 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 9.8e-07
   PF13606.1   1 nGnTpLhlAasngrielveaLlengadi 28 
                 +G+T+L +Aas+  +++v+ L+e+ga +
  MMETSP1325-20131115|1736_1 184 DGDTALIMAASHAAMSAVKVLVEKGAKL 211
                 79***********************976 PP

  == domain 3    score: 22.1 bits;  conditional E-value: 3.5e-08
   PF13606.1   1 nGnTpLhlAasngrielveaLlengad 27 
                 nGnT++  Aa+n + e+v++L+enga+
  MMETSP1325-20131115|1736_1 217 NGNTAIIAAAQNAHDEVVDYLIENGAN 243
                 8************************97 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   1.8e-05      0.05       5      50 ..     122     168 ..     120     169 .. 0.86
   2 !   28.7   0.1   4.2e-10   1.2e-06       2      54 .]     153     205 ..     152     205 .. 0.95
   3 !   13.8   0.0     2e-05     0.055       7      45 ..     191     229 ..     191     230 .. 0.92
   4 !   14.1   0.1   1.7e-05     0.045       1      38 [.     218     255 ..     218     259 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.8e-05
   PF13637.1   5 LhyaaisgrlelvklLlek.gidinrtdesGntaLhiAalrgnieil 50 
                 L +aa++g+  +v+ +l+  + ++n++   G+taL+ Aa++++  i+
  MMETSP1325-20131115|1736_1 122 LQNAARDGDKGTVMKILDGkKENVNAKGFMGFTALIQAAENNHGPIC 168
                 678**************8526669999777************97776 PP

  == domain 2    score: 28.7 bits;  conditional E-value: 4.2e-10
   PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                  taL +aa  ++ +++++L++ g++i  t ++G+taL+ Aa++  ++++k L+
  MMETSP1325-20131115|1736_1 153 FTALIQAAENNHGPICNSLINAGANIEDTTNDGDTALIMAASHAAMSAVKVLV 205
                 589**************************99***************9999985 PP

  == domain 3    score: 13.8 bits;  conditional E-value: 2e-05
   PF13637.1   7 yaaisgrlelvklLlekgidinrtdesGntaLhiAalrg 45 
                 +aa++  + +vk L+ekg+ + ++  +Gnta++ Aa++ 
  MMETSP1325-20131115|1736_1 191 MAASHAAMSAVKVLVEKGAKLEARGFNGNTAIIAAAQNA 229
                 589999******************777*********985 PP

  == domain 4    score: 14.1 bits;  conditional E-value: 1.7e-05
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaL 38 
                 g+ta+  aa+  + e+v +L+e+g++  +t+++G t L
  MMETSP1325-20131115|1736_1 218 GNTAIIAAAQNAHDEVVDYLIENGANEKATNNNGKTGL 255
                 689***********************9999****9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       974  (0.0712405); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.87u 0.39s 00:00:01.26 Elapsed: 00:00:00.71
# Mc/sec: 1599.82
//
Query:       MMETSP1325-20131115|1751_1  [L=613]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-31  106.6   0.0    9.7e-31  105.9   0.0    1.4  1  PF00782.15 Dual specificity phosphatase, catalytic domain
    3.8e-09   36.7   0.0    1.2e-07   32.0   0.0    2.5  2  PF00581.15 Rhodanese-like domain
    0.00065   19.6   0.0     0.0019   18.1   0.0    1.8  2  PF01467.21 Cytidylyltransferase
      0.004   16.4   0.0     0.0064   15.7   0.0    1.2  1  PF00102.22 Protein-tyrosine phosphatase


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.9   0.0   2.8e-34   9.7e-31       1     132 [.     151     284 ..     151     285 .. 0.94

  Alignments for each domain:
  == domain 1    score: 105.9 bits;  conditional E-value: 2.8e-34
                 EEE--CTCHC.HHHHHH----EEEETTSSSSEE.ECCTT---EEEE-----STT--CGGGHHHHHHHHHHHCC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-STTHHHHHHHHH CS
  PF00782.15   1 lylgskstas.lalleklgitlvinvtkevpkn.nadkkseieylripvedetetkiskeleeavefiekaeqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnagflrqLleyer 132
                 lyl+s   a  + +l +l +t+v+nvt   p+  + ++ + i+y rip+ d+ ++++ ++l++av+fi++a+q+g+ vlVHC++G sRSat++ a+lm +++++ +eA++++k  r+++spnagfl++L ++ r
  MMETSP1325-20131115|1751_1 151 LYLSSHALAYdPVVLLNLRVTHVVNVTPDHPNCpRIKERPPIRYHRIPIVDDAKENVREYLSDAVAFISDAIQSGGVVLVHCRHGQSRSATIVGAWLMAKFSMTRDEALAHMKACRPRVSPNAGFLASLEAWAR 284
                 6899998888899999***********8888658788999********7777*****************************************************************************98865 PP

>> PF00581.15  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   3.4e-11   1.2e-07      12     111 ..      30     124 ..      22     126 .. 0.74
   2 ?    1.8   0.0      0.08   2.8e+02      50      94 ..     208     250 ..     187     257 .. 0.66

  Alignments for each domain:
  == domain 1    score: 32.0 bits;  conditional E-value: 3.4e-11
  PF00581.15  12 ekvvllDvRspeeyekghIpgAvnvpldslypkrdlpfkdklaeeleesgkkldkkk..tvvvycssgnrsggaaalllalilkelgyk...............nvyvLdGGfeawk 111
                  ++vl+D+R+++ y+++h+ gAv+ +              + a e++++ +         vv+y+ ++ +++   al      +elg +               +++vL+GGf+++ 
  MMETSP1325-20131115|1751_1  30 ASIVLIDCRQAHSYAHSHLDGAVHAAD-------------DCAAEIRNHPR----VErwDVVLYGDGSSNAASNQAL-----TSELGVNarealkqlapfqskcKIRVLRGGFDEFR 124
                 689************************.............45555555555....332247***9544444444444.....4556777777777889999999**********997 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.08
  PF00581.15  50 kdklaeeleesgkkldkkktvvvycssgnrsggaaalllalilke 94 
                 +++l++ ++     +++   v+v+c++g++++   +++ a+++++
  MMETSP1325-20131115|1751_1 208 REYLSDAVAFISDAIQSGGVVLVHCRHGQSRSA--TIVGAWLMAK 250
                 5566666666666677778899***76655443..3334555555 PP

>> PF01467.21  Cytidylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.8   6.1e+03     105     118 ..     324     337 ..     278     347 .. 0.58
   2 !   18.1   0.0   5.5e-07    0.0019      16     156 ..     387     580 ..     386     581 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 1.8
                 HHHHHEEEECCCHH CS
  PF01467.21 105 lleevklvvvsrpg 118
                   ++ +++v++ pg
  MMETSP1325-20131115|1751_1 324 SSKKQQFAVLVLPG 337
                 44444444444443 PP

  == domain 2    score: 18.1 bits;  conditional E-value: 5.5e-07
                 HHHHHHHHSSSS.EEEEEEECTCCCSTT.......CTSTHHHHHHHHHHHHTCHTT.EEEEECCCSTS.............................................HHC.TTCEEEEEEECTTTCHHHHSTTHHHHHHHHEEEECCCHHCCCSECGGCCCHCCSEE.EEEEECCSTTCC........H-HHHHHH CS
  PF01467.21  16 lleqakelldedlivvvpsdespkkdtk.......plfsaeeRvamlelalevder.levddfelera.............................................kkegpdvdlyliigadvleslekwraiqelleevklvvvsrpgddkletvldreeldkkplgiivikeppsnd........iSstkire 156
                  le a++ l++d++ vv+s  +p+++++         +s+e R+++++l+ + + r  e+d   ++                                               ++ g+dv  y+++gad ++ l + + +++  ++vk +v+ r + ++l ++         +lg+ ++      d        +Sstk+r+
  MMETSP1325-20131115|1751_1 387 CLELARDRLEQDGVHVVASFLQPSSEQYvrmklgeQAISLESRIELCTLMAAASVRlAEADGTATAAPlsaqdasgdpracvwrggetngsqaankiaeyitdclfsdprfqgRRGGADVVPYMVCGADFIARLGGAEFMRKSNPSVKSIVITRRDMTDLGDMR--------NLGPSWWVVDADDDshtqklaeVSSTKVRA 580
                 6899*********************999*9*9999999********9999988887567777777776***************************************************************************************887765544........555555555544445566688899999997 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.9e-06    0.0064     147     210 ..     206     259 ..     192     275 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.9e-06
                 SCGSGSHHHHHHHHHHHHHSSTTSS-EEEES------HHHHHHHHHHHHHHHHT--TBEHHHHH CS
  PF00102.22 147 gvpespkslldlirkvrksktaksgpvvVhCsaGvgRtgtfvaldilleqleaeeekvdvlqiv 210
                 +v e  ++ + +i ++ +s     g v+VhC +G +R++t+v ++++ +   +++e      ++
  MMETSP1325-20131115|1751_1 206 NVREYLSDAVAFISDAIQSG----GVVLVHCRHGQSRSATIVGAWLMAKFSMTRDE------AL 259
                 45566677778888888888....99*******************99987666444......34 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.95u 0.35s 00:00:01.29 Elapsed: 00:00:00.79
# Mc/sec: 1859.45
//
Query:       MMETSP1325-20131115|1752_1  [L=392]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-69  230.3   0.0      9e-69  230.0   0.0    1.1  1  PF03152.9  Ubiquitin fusion degradation protein UFD1
  ------ inclusion threshold ------
       0.11   12.0   0.0       0.21   11.1   0.0    1.4  1  PF02933.12 Cell division protein 48 (CDC48), domain 2


Domain annotation for each model (and alignments):
>> PF03152.9  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.0   0.0   1.3e-72     9e-69       1     176 []      35     207 ..      35     207 .. 0.99

  Alignments for each domain:
  == domain 1    score: 230.0 bits;  conditional E-value: 1.3e-72
   PF03152.9   1 kfeqkyrcypvsflakeekeeiesGgkiilPpsaLdeLskleieypmlFelsneaakkvthcgVLEFiaeeGtiylpewmmenlgleegdlvevesvslpkgkfvklqpqskdfldisnpkavLetaLrnfstLtkgdvieieyndkkyelkivevkpanaisiietdlevdfaep 176
                 +f+++y+c+p +f     ke +e+G+kiilP+saLd L++l++eypmlF+l+n+++ +vthcgVLEF+a eG +++p+w m+nl l eg l++v++vslpk+++vk+qpq++dfldi+np+avLe +Lr+fs++tkgd + i yndkky+l+i evkpa+a +iie+d+++df++p
  MMETSP1325-20131115|1752_1  35 QFDEMYSCFPGAFH---GKEGMEEGDKIILPESALDALARLDVEYPMLFQLTNKQNGNVTHCGVLEFSAPEGNAFVPYWTMSNLMLPEGGLIQVKNVSLPKATYVKFQPQHVDFLDINNPRAVLEFTLRSFSCVTKGDQLCIPYNDKKYYLEIKEVKPADAACIIECDVNIDFEAP 207
                 5899*********9...99**********************************************************************************************************************************************************987 PP

>> PF02933.12  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.1e-05      0.21      19      49 ..     165     196 ..     164     214 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3.1e-05
                 E----EE-EE----EEEEEEEEEESS..SEE- CS
  PF02933.12  19 vskGdiivfeflgkeiklvVvstePsg.pvki 49 
                 v+kGd++ ++++ k   l +++++P++ +++i
  MMETSP1325-20131115|1752_1 165 VTKGDQLCIPYNDKKYYLEIKEVKPADaACII 196
                 8**************************64455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.55
# Mc/sec: 1707.95
//
Query:       MMETSP1325-20131115|1743_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0094   15.6   2.6      0.014   15.0   1.8    1.3  1  PF05010.9 Transforming acidic coiled-coil-containing protein (TACC)
  ------ inclusion threshold ------
       0.14   11.7   0.0       0.47   10.0   0.0    1.9  1  PF09253.5 Pollen allergen ole e 6
       0.26   10.8   7.8        0.4   10.2   4.8    1.7  1  PF11875.3 Domain of unknown function (DUF3395)
          2    8.7  10.8        9.3    6.6   4.3    2.9  3  PF05957.8 Bacterial protein of unknown function (DUF883)


Domain annotation for each model (and alignments):
>> PF05010.9  Transforming acidic coiled-coil-containing protein (TACC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   1.8   4.1e-06     0.014      87     190 ..     104     338 ..      50     342 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4.1e-06
   PF05010.9  87 slekslsdlfkryekykeviegykk........................................................................................NEetLkkyaqeeldklkke.eqryqalKahaeekleianseieevrrkakaenqalqaqLrke..........................................qlklqsLeeeLeqkrkE 190
                   e+   d+  +   +k+ +egyk+                                                                                            Lk  a   +  +k   e +y+ +K+ a++k+e+     ++v+  a + +++l+ +++k+                                          +++   L e+ e++ +E
  MMETSP1325-20131115|1743_1 104 KFETVKGDVDVKVTEVKAKVEGYKSqalelkskvgvdptaspsirflealvraslirspeggsgrdeaaaaltgrfrdllapkrasxspkltnhapshxtvetatakvdevkaKALELKDTATAKVTEVKETaEAKYDEVKVIAAKKVEQTKVVAQKVKVVAVETATTLKSEIEKDglvvvatkagevakeqvvaavevaktegvktlvenvttavieKVNEVPLAETAEVEGEE 338
                 34555559999999******************************************************************************9999999999999998777554444667888888888764269*****************************************66666666666666666666666666666555555555555555555555555555555 PP

>> PF09253.5  Pollen allergen ole e 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00014      0.47      21      40 ..     108     127 ..      97     128 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00014
   PF09253.5  21 mKCDeDCsvkelKekiEnlK 40 
                  K D D  v e+K+k+E +K
  MMETSP1325-20131115|1743_1 108 VKGDVDVKVTEVKAKVEGYK 127
                 799****************9 PP

>> PF11875.3  Domain of unknown function (DUF3395)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   4.8   0.00012       0.4      11      92 ..     240     324 ..     228     336 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00012
   PF11875.3  11 ieeqrkklrkevakkreeaeeaikllkelverklkkeekkgGLvIlkAeyGvles....kkkteknrese...kpevlDvtiplqalVe 92 
                 + e +   +k+v+++ +  ++++k+++  + + lk e +k+GLv++  + G++ +    ++ + ++       k +v +vt ++  +V+
  MMETSP1325-20131115|1743_1 240 YDEVKVIAAKKVEQT-KVVAQKVKVVAVETATTLKSEIEKDGLVVVATKAGEVAKeqvvAAVEVAK---TegvKTLVENVTTAVIEKVN 324
                 444444445555555.445689******************************99855442222222...13457778888888877776 PP

>> PF05957.8  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.036   1.2e+02      13      54 ..      89     130 ..      74     142 .. 0.66
   2 ?    6.6   4.3    0.0027       9.3      18      71 ..     207     260 ..     200     272 .. 0.78
   3 ?    0.0   0.8      0.29     1e+03      12      39 ..     252     279 ..     242     330 .. 0.64

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.036
   PF05957.8  13 dleellksaadeageeaeelReraeealerarerlrdaedav 54 
                 ++++ + + + +a  + e+++  ++ +++++++++++ ++++
  MMETSP1325-20131115|1743_1  89 KADAKFLEIKGQAVTKFETVKGDVDVKVTEVKAKVEGYKSQA 130
                 444444455666777777788888888888887777776665 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0027
   PF05957.8  18 lksaadeageeaeelReraeealerarerlrdaedavrerakeaaeaadeyVre 71 
                 +  + de + +a el++ a++++++++e+++  +d+v+  a + +e+++ + ++
  MMETSP1325-20131115|1743_1 207 ATAKVDEVKAKALELKDTATAKVTEVKETAEAKYDEVKVIAAKKVEQTKVVAQK 260
                 455678888999999999999999999999999999999999999998877655 PP

  == domain 3    score: 0.0 bits;  conditional E-value: 0.29
   PF05957.8  12 adleellksaadeageeaeelReraeea 39 
                 ++++ ++++++  a e+a +l++++e+ 
  MMETSP1325-20131115|1743_1 252 EQTKVVAQKVKVVAVETATTLKSEIEKD 279
                 5556666666666777777777766653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1135  (0.0830164); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.39s 00:00:01.12 Elapsed: 00:00:00.56
# Mc/sec: 1505.08
//
Query:       MMETSP1325-20131115|1754_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00079   18.1   0.0    0.00079   18.1   0.0    1.1  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.043   13.4   0.0      0.067   12.8   0.0    1.3  1  PF09933.4  Predicted small integral membrane protein (DUF2165)


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.2e-07   0.00079     118     188 ..       2      70 ..       1     132 [. 0.77

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 1.2e-07
  PF07690.11 118 eergralgllsagfslGailgpllggllasslgWravFlilailsllaavlvllllprepperkrkspaee 188
                 +er++al+++ ++  lG ++g++  g++a+  +   +F ++a+++l ++  ++++  +++  ++r  ++e+
  MMETSP1325-20131115|1754_1   2 SERPQALAMIRSMGDLGLLMGAGCLGAVAHVSSMDIAFQANAAMLLAVTAAFAAVANEPRDLKRR--SEEK 70 
                 69**********************************************88544444333333333..3333 PP

>> PF09933.4  Predicted small integral membrane protein (DUF2165)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   9.8e-06     0.067      36      61 ..      29      54 ..      23      58 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 9.8e-06
   PF09933.4 36 vqhvlsmdttfpaneikyrAitspll 61
                v+hv smd  f+an+++  A+t +++
  MMETSP1325-20131115|1754_1 29 VAHVSSMDIAFQANAAMLLAVTAAFA 54
                99********************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       628  (0.0459333); expected 273.4 (0.02)
Passed bias filter:                      408  (0.029842); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.55
# Mc/sec: 710.19
//
Query:       MMETSP1325-20131115|1750_1  [L=447]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-26   91.6   0.0    6.9e-26   91.0   0.0    1.3  1  PF01435.13 Peptidase family M48
  ------ inclusion threshold ------
      0.051   12.4   0.4      0.093   11.5   0.3    1.3  1  PF05569.6  BlaR1 peptidase M56


Domain annotation for each model (and alignments):
>> PF01435.13  Peptidase family M48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.0     1e-29   6.9e-26      32     225 ..     181     413 ..     160     414 .. 0.79

  Alignments for each domain:
  == domain 1    score: 91.0 bits;  conditional E-value: 1e-29
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx..........xxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01435.13  32 elqrvveelakeagagfpptkvyvvespklNAFalgggk.nkr....ivltdgLlealnedelaaVlGHElGHikhrHsvesliqslllslllflllavligraelaaafgfldaqgiliv......................ellqllllalSRkqEyqADeagvklgkkkdl.laralyklsea..........vkalaklak............dnlgkvvsdkllsellsTHPplleRiq 225
                 ++ ++v + a+ a   + ++k  ++ s+++NAFa+  g   k+    +++t+gL+ +l+ +el aV++HE+GHi h +  + ++ + ++s l +++ +     +++ +++   +++g                          ++  ll l  SR+ E+ AD+a+++l+ + d  la+al+k++            +       +            + ++++ +  + ++l+sTHP +++R++
  MMETSP1325-20131115|1750_1 181 RISKMVADTARDA-GLLSTPKAWLIPSSEPNAFAMDSGLlAKHkphaVAVTKGLVSTLTNSELHAVIAHEIGHIRHHDCGRAIQTASMVSGLRTAMRLGWQLLKSESQSKR-SKSNGS--DkdddsgsgaagilligvggasyVASNLLRLSSSRAAEFAADAAAAELVPNGDVhLASALQKIERStverdelggsN-------DylshmyfsnrpsELRREPGFWTKAADLFSTHPRTADRVA 413
                 6888999999999.4445589*************9887665544445*********************************9998888888777766654333333332221.122222..123444588899**********9999***********************999877*********9988855555553.......355555558888677888999999**************97 PP

>> PF05569.6  BlaR1 peptidase M56
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   1.4e-05     0.093     185     212 ..     231     258 ..     219     267 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.4e-05
   PF05569.6 185 adflkklsdeeleyillHElaHlkrkDl 212
                 + ++ +l++ el+ +++HE  H++++D 
  MMETSP1325-20131115|1750_1 231 KGLVSTLTNSELHAVIAHEIGHIRHHDC 258
                 556789*********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.40s 00:00:01.17 Elapsed: 00:00:01.51
# Mc/sec: 709.39
//
Query:       MMETSP1325-20131115|1753_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-46  157.3   0.1    3.4e-46  157.1   0.1    1.0  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.1   0.1   2.5e-50   3.4e-46       1     153 [.      29     190 ..      29     192 .. 0.86

  Alignments for each domain:
  == domain 1    score: 157.1 bits;  conditional E-value: 2.5e-50
  PF00160.16   1 lvdietss..kGrivieLfedkaPktvenFlklakeg...........fYdgtkfhrvikgfmiqgGdpsgkgangeekkagges.....ipdEikkkklkh.krGalamartgpepnsngsqFfItlgdaphlDgkytvFGkVvegmdvvekie.avetdekpeknvkiksv 153
                 ++die+++  +Griv+ Lf+d +PktvenF+ la+ g           +Y+g++fhrvi++fm+qgGd+++ +   +    gges     ++dE+  +klkh  +G+l+ma+ g  +++ngsqFfI++ ++p+lDgk++vFG+V egmdv+++ie ++++++ p+ +++i++ 
  MMETSP1325-20131115|1753_1  29 FFDIEIGGqpAGRIVMGLFGDVVPKTVENFRALAT-GekgvgkagkplHYKGSSFHRVIPQFMLQGGDFTQGNG--R----GGESiygskFKDEN--FKLKHtGPGVLSMANAG--KDTNGSQFFICTVKTPWLDGKHVVFGEVLEGMDVMKAIEgKGSRSGTPSAKIVISDS 190
                 58999988999***********************7.335677888999********************777644..3....333222334*****..67888688******998..6**************************************557666699999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1036.68
//
Query:       MMETSP1325-20131115|1755_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        79  (0.00577823); expected 273.4 (0.02)
Passed bias filter:                       77  (0.00563195); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|1756_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.2    6.8   5.8        1.7    7.1   3.0    1.6  2  PF01112.13 Asparaginase


Domain annotation for each model (and alignments):
>> PF01112.13  Asparaginase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.0   0.00012       1.7     177     236 ..      12      67 ..       1      80 [. 0.75
   2 ?   -1.5   0.0     0.053   7.2e+02     231     247 ..      93     109 ..      81     122 .. 0.65

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00012
                 BTTB.C--E-EEEE-----EEEEEEE---TTB----B--TT------EE-TTSEEE---- CS
  PF01112.13 177 keesghdTiGmvaldaegnlaaatstgGlkfkivGRvgDspiiGAGaYanklagvsaTGk 236
                 ke++  d +G  a   +g la+    + ++ +++GRv D ++ GA   a     v+  G+
  MMETSP1325-20131115|1756_1  12 KETERTDAVGG-AFGDDGSLASWSGGSAAAGELPGRVRDGALLGAVGVAGA---VAGLGR 67 
                 44556889987.67779*****9999999***************9554433...444454 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.053
                 EE------HHHHCTHHH CS
  PF01112.13 231 vsaTGkGeviiralvaa 247
                 ++  G+G  ++r+++a+
  MMETSP1325-20131115|1756_1  93 AAPLGTGSLLVRFTLAR 109
                 34457777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.59
# Mc/sec: 511.76
//
Query:       MMETSP1325-20131115|1758_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0091   15.0   7.7     0.0091   15.0   5.3    1.1  1  PF01690.12 Potato leaf roll virus readthrough protein
  ------ inclusion threshold ------
       0.84    9.3   3.2       0.84    9.3   2.2    1.1  1  PF06679.7  Protein of unknown function (DUF1180)
        1.1    7.6   8.1          1    7.8   5.6    1.1  1  PF04625.8  DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   5.3     2e-06    0.0091       9      30 ..       3      23 ..       1      43 [. 0.73

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2e-06
  PF01690.12  9 PgPsPtPpppPqPtPePtPakk 30
                P P+P+P p P+P+P+P+Pa+k
  MMETSP1325-20131115|1758_1  3 PAPAPAPAP-PAPKPAPAPAAK 23
                555555553.788888888754 PP

>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.2   0.00018      0.84      43      80 ..       5      43 ..       1      49 [. 0.59

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00018
   PF06679.7 43 prtlsalpPgptpanptalleadakkGka..setssggal 80
                p    ++pP+p pa + a+++ ++++Gk   +et++ + l
  MMETSP1325-20131115|1758_1  5 PAPA-PAPPAPKPAPAPAAKTQKGQGGKVleAETVNKDDL 43
                3333.46777777766666666777777511556666666 PP

>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   5.6   0.00023         1     107     131 ..       2      25 ..       1      43 [. 0.75

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00023
   PF04625.8 107 apvpapapaaaaapaaasapaadsp 131
                 ap papapa+ +ap  a+apaa++ 
  MMETSP1325-20131115|1758_1   2 APAPAPAPAP-PAPKPAPAPAAKTQ 25 
                 5666666665.57888999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 196.42
//
Query:       MMETSP1325-20131115|1757_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   11.8   0.1        2.7    7.7   0.0    2.4  2  PF13418.1 Galactose oxidase, central domain


Domain annotation for each model (and alignments):
>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.01   1.4e+02      26      36 ..      16      26 ..       9      32 .. 0.84
   2 ?    7.7   0.0    0.0002       2.7      26      42 ..      41      57 ..      27      74 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.01
   PF13418.1 26 gplnDlyvfDl 36
                ++lnD+ ++++
  MMETSP1325-20131115|1757_1 16 SALNDVALWNI 26
                68*******97 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0002
   PF13418.1 26 gplnDlyvfDlstntWt 42
                ++lnD+  ++++++++t
  MMETSP1325-20131115|1757_1 41 STLNDVASWNIACMRFT 57
                79************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|1762_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|1760_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-07   29.1   1.7        0.3   11.1   0.1    4.3  5  PF00560.28 Leucine Rich Repeat
    2.6e-06   26.8   3.5      0.039   13.4   0.1    3.4  2  PF12799.2  Leucine Rich repeats (2 copies)
    1.4e-05   24.4   3.8        1.2    9.5   0.3    4.5  4  PF13504.1  Leucine rich repeat
    0.00012   21.6   6.2        6.2    7.1   0.2    4.8  5  PF13516.1  Leucine Rich repeat
     0.0002   21.0   2.1       0.01   15.6   0.1    3.1  3  PF05725.7  FNIP Repeat
     0.0052   16.4   0.7      0.093   12.3   0.1    2.9  3  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.079   1.8e+02       1      10 [.       8      17 ..       8      19 .. 0.86
   2 ?   -1.6   0.0         2   4.5e+03      12      20 ..      24      32 ..      23      39 .. 0.63
   3 ?    1.0   0.0      0.28   6.4e+02       2      20 ..      31      50 ..      30      52 .. 0.78
   4 !   10.3   0.0   0.00025      0.57       1      21 [.      53      74 ..      53      75 .. 0.88
   5 !   11.1   0.1   0.00013       0.3       2      16 ..      77      96 ..      76     102 .. 0.80

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.079
                TESEEEETSS CS
  PF00560.28  1 nLeeLdLsgN 10
                ++++L+L ++
  MMETSP1325-20131115|1760_1  8 SITHLNLGSC 17
                579****999 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 2
                CBCHHHHHH CS
  PF00560.28 12 ltslppsls 20
                +++lp s+ 
  MMETSP1325-20131115|1760_1 24 IKDLPQSIT 32
                666776544 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.28
                ESEEEETSS.BCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppsls 20
                ++ L L ++  l+ ++   ++
  MMETSP1325-20131115|1760_1 31 ITDLTLAFCeELEgDIEV-FK 50
                567899999999988888.76 PP

  == domain 4    score: 10.3 bits;  conditional E-value: 0.00025
                TESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.slppslsn 21
                n++eL+L g+  lt ++ + l+ 
  MMETSP1325-20131115|1760_1 53 NITELNLAGCrYLTgDIES-LKD 74
                789***********99998.765 PP

  == domain 5    score: 11.1 bits;  conditional E-value: 0.00013
                ESEEEETSS.BCB.C...HH CS
  PF00560.28  2 LeeLdLsgN.nlt.s...lp 16
                L++LdL ++ +lt +   lp
  MMETSP1325-20131115|1760_1 77 LQTLDLYNCsKLTgNikdLP 96
                9************8855555 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.1   1.7e-05     0.039       2      43 ..       8      73 ..       7      74 .. 0.81
   2 !   11.2   0.4   8.3e-05      0.19       3      23 ..      77     102 ..      77     104 .] 0.88

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.7e-05
   PF12799.2  2 nLevLdLsnN.....nIkdlppelanLp.................nLktLnLsnNpi.s.dlsaLa 43
                + ++L+L ++     nIkdlp ++  L+                 n ++LnL+++++ + d+++L+
  MMETSP1325-20131115|1760_1  8 SITHLNLGSCwgpkgNIKDLPQSITDLTlafceelegdievfkemNITELNLAGCRYlTgDIESLK 73
                5789******999999*****9988877777777777777777999*********86335888775 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 8.3e-05
   PF12799.2   3 LevLdLsnN.....nIkdlppelanL 23 
                 L++LdL n+     nIkdlp ++  L
  MMETSP1325-20131115|1760_1  77 LQTLDLYNCskltgNIKDLPQSITDL 102
                 9********888888*****998776 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.11   2.6e+02       3      17 .]       9      28 ..       7      28 .. 0.73
   2 ?    1.6   0.0      0.21   4.8e+02       3      14 ..      31      43 ..      29      46 .. 0.79
   3 !    8.4   0.0    0.0012       2.7       2      14 ..      53      66 ..      52      76 .. 0.85
   4 !    9.5   0.3   0.00051       1.2       3      14 ..      77      89 ..      75      96 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.11
   PF13504.1  3 LkeLdLsgn.....rLtsLP 17
                 + L+L ++     ++++LP
  MMETSP1325-20131115|1760_1  9 ITHLNLGSCwgpkgNIKDLP 28
                5889**99977664477777 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.21
   PF13504.1  3 LkeLdLsgnr.Lt 14
                 ++L L+ ++ L+
  MMETSP1325-20131115|1760_1 31 ITDLTLAFCEeLE 43
                589****998675 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0012
   PF13504.1  2 nLkeLdLsgnr.Lt 14
                n +eL+L+g+r Lt
  MMETSP1325-20131115|1760_1 53 NITELNLAGCRyLT 66
                679*******9988 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.00051
   PF13504.1  3 LkeLdLsgnr.Lt 14
                L++LdL +++ Lt
  MMETSP1325-20131115|1760_1 77 LQTLDLYNCSkLT 89
                89*******8887 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0063        14       2      12 ..       7      17 ..       6      26 .. 0.90
   2 ?    1.5   0.0      0.17     4e+02       2      13 ..      29      40 ..      28      47 .. 0.81
   3 !    6.4   0.1    0.0045        10       3      17 ..      53      68 ..      53      74 .. 0.82
   4 !    7.1   0.2    0.0027       6.2       4      15 ..      77      89 ..      75      97 .. 0.78
   5 ?   -0.6   0.0      0.83   1.9e+03       2       9 ..      97     104 .]      95     104 .] 0.85

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0063
   PF13516.1  2 knLtsLdLsnN 12
                +++t+L+L+++
  MMETSP1325-20131115|1760_1  7 QSITHLNLGSC 17
                689******98 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.17
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L L ++ 
  MMETSP1325-20131115|1760_1 29 QSITDLTLAFCE 40
                68999*999995 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.0045
   PF13516.1  3 nLtsLdLsnNq.igde 17
                n+t+L+L ++  ++++
  MMETSP1325-20131115|1760_1 53 NITELNLAGCRyLTGD 68
                89********866654 PP

  == domain 4    score: 7.1 bits;  conditional E-value: 0.0027
   PF13516.1  4 LtsLdLsnNq.ig 15
                L++LdL n+  ++
  MMETSP1325-20131115|1760_1 77 LQTLDLYNCSkLT 89
                9********6354 PP

  == domain 5    score: -0.6 bits;  conditional E-value: 0.83
   PF13516.1   2 knLtsLdL 9  
                 +++t+L+L
  MMETSP1325-20131115|1760_1  97 QSITDLNL 104
                 58999998 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   4.5e-06      0.01       7      41 ..       2      36 ..       1      39 [. 0.92
   2 ?   -2.4   0.0       1.9   4.3e+03      13      19 ..      53      59 ..      52      62 .. 0.75
   3 ?    3.9   0.0     0.021        47       7      19 ..      92     104 .]      78     104 .] 0.77

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 4.5e-06
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyF 41
                i  LP+++++L+lg+    k +i  LP+S++ L++
  MMETSP1325-20131115|1760_1  2 IKDLPQSITHLNLGSCWGPKGNIKDLPQSITDLTL 36
                568****************************9987 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 1.9
   PF05725.7 13 nleiLil 19
                n++ L+l
  MMETSP1325-20131115|1760_1 53 NITELNL 59
                8888887 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.021
   PF05725.7   7 igeLPsnleiLil 19 
                 i  LP++++ L+l
  MMETSP1325-20131115|1760_1  92 IKDLPQSITDLNL 104
                 4567777777765 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.28   6.4e+02      50      58 ..       8      16 ..       4      19 .. 0.65
   2 !   12.3   0.1   4.1e-05     0.093      20      59 ..      48      85 ..      21      88 .. 0.63
   3 !   11.4   0.2   7.8e-05      0.18       2      35 ..      53      85 ..      52     104 .] 0.82

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.28
   PF13855.1 50 sLreLnLsg 58
                s+++LnL +
  MMETSP1325-20131115|1760_1  8 SITHLNLGS 16
                566666644 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 4.1e-05
   PF13855.1 20 aFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                +Fk + n ++L+L g++  + + e++k++  L+ L+L ++
  MMETSP1325-20131115|1760_1 48 VFKEM-NITELNLAGCRYLTGDIESLKDC-PLQTLDLYNC 85
                66666.36666666666666666666666.4666666554 PP

  == domain 3    score: 11.4 bits;  conditional E-value: 7.8e-05
   PF13855.1  2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgn 35
                n++eL+L ++r  + + +++k+++ L++LdL ++
  MMETSP1325-20131115|1760_1 53 NITELNLAGCRYLTGDIESLKDCP-LQTLDLYNC 85
                689999**9988888889*****9.*****9943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 508.61
//
Query:       MMETSP1325-20131115|1763_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-08   32.0  20.6    0.00022   20.8   3.1    2.4  2  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   3.1   1.6e-08   0.00022       3      31 .]     141     169 ..     138     169 .. 0.80
   2 !   17.0   5.7   2.6e-07    0.0036       3      29 ..     191     218 ..     189     219 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 1.6e-08
                 -SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   3 pgWeersddddGrvYYyNheTgetqWekP 31 
                 +gW++ +d++   +YYy+ +Tge +W +P
  MMETSP1325-20131115|1763_1 141 GGWQQMWDEEVESYYYYHESTGEATWVRP 169
                 46*966855556669************99 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 2.6e-07
                 -S.EEE.E.E-.---EEEEETTT--EESS CS
  PF00397.21   3 pg.Weersddd.dGrvYYyNheTgetqWe 29 
                 +g We+++d + +G +Y yN+eTget W+
  MMETSP1325-20131115|1763_1 191 DGeWEHYWD-EtEGMWYSYNAETGETKWD 218
                 677*****7.559***************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1207.96
//
Query:       MMETSP1325-20131115|1759_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 972.37
//
Query:       MMETSP1325-20131115|1764_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-11   44.6   0.0    1.5e-11   44.1   0.0    1.2  1  PF00307.26 Calponin homology (CH) domain


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   1.1e-15   1.5e-11      18     104 ..       6      89 ..       1      93 [. 0.90

  Alignments for each domain:
  == domain 1    score: 44.1 bits;  conditional E-value: 1.1e-15
                 TSSHSHH.HHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS-HHHHHTST-HHHHHHHHHHH CS
  PF00307.26  18 srqvenl.skdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvltledllysgnkknvlaflaeL 104
                   +++nl ++ l +Gv L+ l  +++p+ vd+e +  +  ++  d+l N+++++++a++ +g +++lt+ed++ + ++k++++f+ +L
  MMETSP1325-20131115|1764_1   6 ATRINNLsDNTLDSGVFLIDLCAAVAPNAVDWEIV--TAGATDEDKLSNAKYCISIARK-IGACVFLTPEDIV-EIKPKMIFTFIGAL 89 
                 5689999999*************************..5555779***********7777.*************.**********9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.54
# Mc/sec: 1100.55
//
Query:       MMETSP1325-20131115|1768_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-19   68.4   0.1    6.6e-19   67.9   0.1    1.2  1  PF12695.2  Alpha/beta hydrolase family
    0.00078   18.5   0.0     0.0024   17.0   0.0    1.7  2  PF00326.16 Prolyl oligopeptidase family
     0.0012   18.7   1.0       0.12   12.1   0.7    2.3  1  PF12697.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.026   13.8   0.0          1    8.6   0.0    2.1  2  PF02230.11 Phospholipase/Carboxylesterase
      0.069   11.7   0.0       0.09   11.3   0.0    1.1  1  PF05677.7  Chlamydia CHLPS protein (DUF818)
        0.1   11.5   0.0       0.22   10.5   0.0    1.5  1  PF03583.9  Secretory lipase


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.1   2.9e-22   6.6e-19       1     142 []     101     280 ..     101     280 .. 0.83

  Alignments for each domain:
  == domain 1    score: 67.9 bits;  conditional E-value: 2.9e-22
   PF12695.2   1 lvvlvhGaggdssayeplaealakr.gfavvavdlpghgas..egaa............aakrvl.aadll.dleriilvGhSlGGgvalelagrd..drvkglvllap........f.............pdgedlakltlpvllihGtrDgvvppeeaeklakalpgdaelvviegasHf 142
                 +++++hG+g d   +   +++la+  + +v+++++ g++ s  e  a            aa r+l ++  +  +  iil+G+S+G+g+++ +a+++  ++++g+ l ap        f             ++ +++ k+t pv ++hGt+D+vvp ++ e+l++al++++e +++ g +H+
  MMETSP1325-20131115|1768_1 101 TIIYSHGNGEDIGLLLHDMDELARStNTNVLIYEYVGYSISrlE-GAipteagcyrsidAAWRFLtVDM-KvAVHTIILYGRSIGSGPTCDMASKPeaANLAGVALQAPiasgarvvFgdagvaarpldifTNYSKIGKVTRPVAIMHGTADQVVPITNGEALFDALQSPHEPLWLAGYGHN 280
                 69*********999999999999999************999752.224677777777777777775333.35899*******************887789999999999766666551555666666555477889999999***************************************6 PP

>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.82   1.9e+03     177     196 ..      22      41 ..      13      46 .. 0.79
   2 !   17.0   0.0     1e-06    0.0024     133     176 ..     230     271 ..     218     281 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.82
                 EEEEEES---------HHHH CS
  PF00326.16 177 vlllifpdegHgigkprakv 196
                 +++  + d +Hg+ + r+ +
  MMETSP1325-20131115|1768_1  22 LDYAFYADVNHGLFRRRRTR 41 
                 7889999****998877766 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 1e-06
                 HHH-GGG-------EEEEEETT-SSS-THHHHHHHHHHH..--S CS
  PF00326.16 133 spyspadnvkaypplllihGeeDdrvppaealklvaaLqkagkn 176
                  +ys++ +  ++ p+ ++hG++D+ vp+ +++ l++aLq+ +++
  MMETSP1325-20131115|1768_1 230 TNYSKIGK--VTRPVAIMHGTADQVVPITNGEALFDALQSPHEP 271
                 45666666..999**************************87665 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.7   5.1e-05      0.12     170     216 ..     233     280 ..     102     285 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.1e-05
                 HHHTT--S-EEEEE-----HHHHHHHHHHHHHST.TEEEEE---SSSS CS
   PF12697.2 170 ealarldvPvlviageaDrvvppeearrlaealp.garvvvlpgagHl 216
                 + +++++ Pv +++g+aD+vvp  + ++l +al    +  +l+g gH+
  MMETSP1325-20131115|1768_1 233 SKIGKVTRPVAIMHGTADQVVPITNGEALFDALQsPHEPLWLAGYGHN 280
                 5667789***************99999999998425788888888885 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.021        48       3      35 ..      88     121 ..      86     134 .. 0.76
   2 ?    8.6   0.0   0.00044         1     155     183 ..     239     267 ..     210     283 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.021
  PF02230.11   3 eaaiespakpaqavvIflHGlGdsg.hllaeaak 35 
                 ++a+  +  +a+ ++I+ HG G +   ll ++ +
  MMETSP1325-20131115|1768_1  88 IPAVYIKTPKARLTIIYSHGNGEDIgLLLHDMDE 121
                 577888889999**********987566666655 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00044
  PF02230.11 155 kipilqlHgeeDevvplalgkaakellkt 183
                   p+  +Hg+ D+vvp+  g+a+ ++l++
  MMETSP1325-20131115|1768_1 239 TRPVAIMHGTADQVVPITNGEALFDALQS 267
                 459999***************99998876 PP

>> PF05677.7  Chlamydia CHLPS protein (DUF818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0     4e-05      0.09     140     226 ..     102     184 ..      87     198 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4e-05
   PF05677.7 140 lLislGnsdlleeralleskddslkrlakllganilvfnYPGvmss..kGeitren.lakayqaCvrYLrDkeqGPkakeiiayGYsLGt 226
                 +++s+Gn++ +    l     + + +la+ +++n+l++ Y G   s  +G i  e    ++ +a  r+L  + +    + ii yG s+G+
  MMETSP1325-20131115|1768_1 102 IIYSHGNGEDIGL--L----LHDMDELARSTNTNVLIYEYVGYSISrlEGAIPTEAgCYRSIDAAWRFLTVDMKV-AVHTIILYGRSIGS 184
                 6777777754444..2....234679****************776622588866642678889999999876664.57889999999986 PP

>> PF03583.9  Secretory lipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   9.8e-05      0.22     220     244 ..     239     263 ..     228     268 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 9.8e-05
   PF03583.9 220 qiPvlvyhgvldeivpiadakklak 244
                 + Pv ++hg+ d++vpi++ ++l +
  MMETSP1325-20131115|1768_1 239 TRPVAIMHGTADQVVPITNGEALFD 263
                 67*****************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.41s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 1455.90
//
Query:       MMETSP1325-20131115|1769_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00013   21.5   1.2    0.00018   21.0   0.8    1.2  1  PF13639.1  Ring finger domain
    0.00027   20.5   1.1    0.00044   19.8   0.8    1.2  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.014   14.9   2.5      0.024   14.1   1.7    1.4  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
      0.024   14.1   0.2      0.057   12.9   0.2    1.6  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
       0.16   11.8   1.9       0.29   11.0   1.3    1.4  1  PF12906.2  RING-variant domain


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.8   6.4e-08   0.00018       3      42 ..      57     112 ..      55     116 .. 0.82

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 6.4e-08
   PF13639.1   3 CaiCldelsegeevvrlpC......gHvfHeeCldewlrssn..........sCPl 42 
                 C++C +e  ++e  +  pC      +H  ++ C ++wl++            +CP+
  MMETSP1325-20131115|1769_1  57 CVVCWEEKARDEMSTPGPCrirsdtRHELCKGCTAQWLKTAIsdgkvgddaiRCPV 112
                 *******9777777777898877778************996444677888889997 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.8   1.6e-07   0.00044       4      43 ..      56     112 ..      54     115 .. 0.75

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 1.6e-07
   PF13923.1   4 sCpiCleelen.....pviltpCg......HlyCkkCieqwleks.........kkkCPi 43 
                  C++C ee        p    pC+      H +Ck C  qwl+++           +CP+
  MMETSP1325-20131115|1769_1  56 RCVVCWEEKARdemstP---GPCRirsdtrHELCKGCTAQWLKTAisdgkvgddAIRCPV 112
                 6****998855454431...3576666666**************9988877776668*97 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.7   8.8e-06     0.024       4      42 ..      56     112 ..      54     121 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 8.8e-06
   PF13920.1   4 tCvvCleread.........vlllpCgHlclCeeCaerllk..........rkkkCpi 42 
                  CvvC+e++a+          +    +H  lC+ C  ++lk             +Cp+
  MMETSP1325-20131115|1769_1  56 RCVVCWEEKARdemstpgpcRIRSDTRHE-LCKGCTAQWLKtaisdgkvgdDAIRCPV 112
                 6******86654543333222333358**.*********9999999999988899997 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   2.1e-05     0.057       1      39 [.      57     111 ..      57     112 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.1e-05
                 -TTTSSS-SSEE.........BSCTS-EE-CHHHHHHHCS........T-----T CS
  PF00097.20   1 CpiCleeakepn........elleCkHsfCskCirkilks........rkkvkCP 39 
                 C +C ee +             ++ +H++C+ C  ++lk+        + +  CP
  MMETSP1325-20131115|1769_1  57 CVVCWEEKARDEmstpgpcrIRSDTRHELCKGCTAQWLKTaisdgkvgDDAIRCP 111
                 77777776666656444444333347*************8777665555555566 PP

>> PF12906.2  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.3   0.00011      0.29       1      39 [.      57      99 ..      57     112 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00011
                ETTTTEE-----..---------TTS--...HHHHHHHHHH..H CS
   PF12906.2  1 CriCleeeeeseplirpCkCkGslklvH...esCleeWlke..s 39
                C++C ee++ +e + +p  C+      H   + C  +Wlk+  s
  MMETSP1325-20131115|1769_1 57 CVVCWEEKARDE-MSTPGPCRIRSDTRHelcKGCTAQWLKTaiS 99
                *******99999.7777777777777783335899****98551 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 793.79
//
Query:       MMETSP1325-20131115|1767_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0035   17.0   1.5       0.02   14.5   1.5    2.0  2  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.49   6.7e+03       7      18 ..     116     127 ..     116     128 .. 0.80
   2 !   14.5   1.5   1.5e-06      0.02       5      35 ..     138     170 ..     137     172 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.49
                 HHHHH----HHH CS
  PF00627.26   7 qqLreMGfsree 18 
                 q+L++ G+++++
  MMETSP1325-20131115|1767_1 116 QRLVAVGVPNQR 127
                 799999998875 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 1.5e-06
                 HHHHHHH----HH..HHHHHHHHTTTSHHHHHH CS
  PF00627.26   5 aiqqLreMGfsre..eakkALratnnnvErAve 35 
                 ++ +L++MGf+++  ++++AL++ n+ + r v+
  MMETSP1325-20131115|1767_1 138 QLDELMAMGFGDDmnACVEALERYNGRMTRVVN 170
                 689*****9977666******998888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 817.33
//
Query:       MMETSP1325-20131115|1770_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 332.83
//
Query:       MMETSP1325-20131115|1765_1  [L=566]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-11   41.9   0.0    1.7e-10   40.6   0.0    1.7  2  PF00498.21 FHA domain
  ------ inclusion threshold ------
       0.29    9.9   8.4       0.47    9.2   5.8    1.2  1  PF07466.6  Protein of unknown function (DUF1517)


Domain annotation for each model (and alignments):
>> PF00498.21  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.0   2.5e-14   1.7e-10       1      68 []     123     193 ..     123     193 .. 0.92
   2 ?   -3.6   0.0       1.7   1.1e+04      15      28 ..     321     334 ..     313     341 .. 0.71

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 2.5e-14
                 EEE-E-TTSSS---TTTS-TTCEEEEEEETCEEEEEEECST--EEETT...EECSTTSEEEE-TTEEEEEC CS
  PF00498.21   1 vtiGRssdcdivlddpsiSrkHalikydeggkfyleDlgSknGtfvNg...qrigkgepvrLksgdvielG 68 
                 vtiGRs+++ ++l++p+ Sr Ha +    +g +yl+D+gS +Gt   g   q+++++ p++++sg+ +++G
  MMETSP1325-20131115|1765_1 123 VTIGRSHEACVRLQHPTASRAHAGLMHCADGVLYLIDFGSAHGTSTGGckaQPVRPQVPTPIASGTLLRFG 193
                 69***********************777777***************7766699999*************98 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 1.7
                 TTTS-TTCEEEEEE CS
  PF00498.21  15 dpsiSrkHalikyd 28 
                 d++   +Ha++k++
  MMETSP1325-20131115|1765_1 321 DSRTAARHAQVKRT 334
                 56667799999875 PP

>> PF07466.6  Protein of unknown function (DUF1517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.8   6.8e-05      0.47       9      72 ..      31      96 ..      27     100 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 6.8e-05
   PF07466.6  9 GGgsfr.apsrssssprssspsgggygsssssy.gggysgggfgfpflipifgfGggflglfglli 72
                GGg  + a+s+ssss++sss+s+++++s+s+ + ++  s  +  f f  p+f      +gl++l++
  MMETSP1325-20131115|1765_1 31 GGGAASsASSSSSSSSSSSSSSSSSSSSTSNPAtSSASSSSTSAFTFQPPAFLKPIKEVGLIQLIL 96
                555555144444444444444444444444444355555667777777888887777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.15u 0.37s 00:00:01.52 Elapsed: 00:00:00.69
# Mc/sec: 1965.71
//
Query:       MMETSP1325-20131115|1774_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|1773_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       629  (0.0460064); expected 273.4 (0.02)
Passed bias filter:                      441  (0.0322557); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.41s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 1183.20
//
Query:       MMETSP1325-20131115|1775_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-05   23.3   0.0    4.8e-05   22.7   0.0    1.3  1  PF01370.16 NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   3.5e-09   4.8e-05     190     227 ..       3      40 ..       2      54 .. 0.87

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 3.5e-09
                 HHH---SEEEE--TT-EEEEEEHHHHHHHHHHHHHSSS CS
  PF01370.16 190 kilegeevtllgdGtqlRdflyveDvaealllvlehgd 227
                 ++l+g++ t++g+G+q R f yv+D++++l+ +++ + 
  MMETSP1325-20131115|1775_1   3 QALQGKPMTIYGEGQQTRSFQYVDDLVNGLIKLMNGDY 40 
                 5889***************************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 694.45
//
Query:       MMETSP1325-20131115|1772_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|1777_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   13.4   5.1      0.039   13.5   3.5    1.1  1  PF04360.7 Serglycin


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   3.5   2.9e-06     0.039      94     111 ..       2      19 ..       1      42 [. 0.60

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.9e-06
   PF04360.7  94 sgsgsGsGsGsgsGsGfl 111
                 sgsgsGsGsG+g  s + 
  MMETSP1325-20131115|1777_1   2 SGSGSGSGSGAGRASASE 19 
                 444444444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 221.55
//
Query:       MMETSP1325-20131115|1776_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0019   17.7   0.1     0.0049   16.4   0.0    1.6  2  PF11903.3 Protein of unknown function (DUF3423)
  ------ inclusion threshold ------
      0.024   14.0   3.5      0.024   14.0   2.4    1.9  2  PF14153.1 Spore coat protein CotO
       0.41   11.0   4.4       0.66   10.3   0.0    2.2  2  PF07813.7 LTXXQ motif family protein


Domain annotation for each model (and alignments):
>> PF11903.3  Protein of unknown function (DUF3423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       0.9   4.1e+03      56      60 ..      14      18 ..       4      34 .. 0.52
   2 !   16.4   0.0   1.1e-06    0.0049      17      35 ..      44      62 ..      40      63 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.9
   PF11903.3 56 kaaee 60
                k++  
  MMETSP1325-20131115|1776_1 14 KQESH 18
                22222 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 1.1e-06
   PF11903.3 17 eakaesRSinaQiehWari 35
                +ak+++RS +aQ+e+W ++
  MMETSP1325-20131115|1776_1 44 HAKLSKRSPEAQAEYWKKV 62
                79**************987 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   2.4   5.2e-06     0.024     117     142 ..       7      32 ..       2      40 .. 0.80
   2 ?    1.1   0.2     0.045   2.1e+02      50      95 ..      52      97 ..      38     103 .. 0.60

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.2e-06
   PF14153.1 117 eleeekqkkerkKsfkeMnleEKidF 142
                 e+ ++ +k+e+ K fk M++eEKi++
  MMETSP1325-20131115|1776_1   7 EKMAKMTKQESHKHFKTMTTEEKIAY 32 
                 334444899***************99 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.045
   PF14153.1 50 kkekeeeqkeekaeveseeeaeeaesedeqesseqeeiaqeveeee 95
                ++++ e  k+ + +++++++ ++   +     +e+e+++++ve+ +
  MMETSP1325-20131115|1776_1 52 PEAQAEYWKKVDPTGAQKKQFDAIIAKRPPPTAEKEYAPMSVEKSK 97
                4444555555566666666666666666666666666666666555 PP

>> PF07813.7  LTXXQ motif family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   1.3       0.1   4.6e+02      63      81 ..       6      24 ..       1      36 [. 0.48
   2 ?   10.3   0.0   0.00014      0.66       5      37 ..      54      86 ..      50     108 .. 0.76

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.1
   PF07813.7 63 meamlearleavkkrakal 81
                 e+m+++  ++ +k+ k++
  MMETSP1325-20131115|1776_1  6 SEKMAKMTKQESHKHFKTM 24
                2344444444444444443 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00014
   PF07813.7  5 riaklkaeLkLtdaQkaalkalaeaaraearel 37
                 +a+ ++++++t aQk++++a+ ++  ++ +e 
  MMETSP1325-20131115|1776_1 54 AQAEYWKKVDPTGAQKKQFDAIIAKRPPPTAEK 86
                688999****************99877766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1157  (0.0846255); expected 273.4 (0.02)
Passed bias filter:                      735  (0.0537595); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 611.84
//
Query:       MMETSP1325-20131115|1780_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-18   66.2   0.5    8.4e-18   64.5   0.4    1.7  1  PF00728.17 Glycosyl hydrolase family 20, catalytic domain


Domain annotation for each model (and alignments):
>> PF00728.17  Glycosyl hydrolase family 20, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   0.4   6.2e-22   8.4e-18     189     349 ..       7     143 ..       1     144 [. 0.80

  Alignments for each domain:
  == domain 1    score: 64.5 bits;  conditional E-value: 6.2e-22
                 .......HHHHHHHHHHH---EEE--GGG-----....---.---EE---TTHHHHHHHHHH-----EE--TTTS-TTS-SS.TT------------HHHHHS---------....--GGG...----EEEE--TT--SHHHHHHHHTTT----------- CS
  PF00728.17 189 leelqsyfikrvekivkkrgkkligWeeilekkeaaklakeevtvqsWrnveqeeqaeklankgykvilspadalYldlgqekrpeeeglewagfmslkkvyewepvaktaaatsaapeekkknvlGgeaalWgEnikdeenleyrlfprllalAeraWsk 349
                 ++e +  f+ r+++i  ++g+++i W+e+ ++ +    +++ ++v++W++v    ++ +++++gy++ +      Y+d  q+ ++            ++  ++w +v++++   + +p++   +vlGg +++WgE++ d+++le++++pr++a+Aer+Ws+
  MMETSP1325-20131115|1780_1   7 EDEGYAFFVGRASDIAVSQGRRPIQWSEVYDHFG--TNLNKGTIVHVWKSVT---NVTEVVANGYDTLVNV---GYVD--QS-WYL-----------DNLDVAWAAVYSKDP-CEGVPDDLCSLVLGGHGEMWGETV-DASDLEQTVWPRMAAIAERLWSP 143
                 4555566999***********************9..677888*******955...7899********9986...5777..33.332...........345566777776654.33344454469*************.9********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 944.16
//
Query:       MMETSP1325-20131115|1779_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1119.93
//
Query:       MMETSP1325-20131115|1782_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.9   0.1       0.44   10.1   0.0    1.8  2  PF07593.7 ASPIC and UnbV


Domain annotation for each model (and alignments):
>> PF07593.7  ASPIC and UnbV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.11   1.5e+03      21      36 ..      55      70 ..      50      75 .. 0.61
   2 ?   10.1   0.0   3.2e-05      0.44      10      37 ..      84     111 ..      76     113 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.11
   PF07593.7 21 tsgggylssnearlhf 36
                +   ++ +s e++ +f
  MMETSP1325-20131115|1782_1 55 QVKASFTGSKELTATF 70
                4455666666666655 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 3.2e-05
   PF07593.7  10 tadgrtqtrevtsgggylssnearlhfG 37 
                  +dg++q+++ t  +gy+s n+ +++ G
  MMETSP1325-20131115|1782_1  84 LCDGEAQYDQSTEEDGYSSFNTSVWTAG 111
                 379******************9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 700.11
//
Query:       MMETSP1325-20131115|1784_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-06   27.8   8.8    1.6e-05   24.4   0.2    3.8  4  PF00514.18 Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
      0.039   14.1   4.1       0.41   10.8   1.0    2.6  2  PF13646.1  HEAT repeats
      0.054   13.2   0.0      0.087   12.6   0.0    1.3  1  PF08389.7  Exportin 1-like protein
        0.2   11.7   0.3        0.2   11.7   0.2    3.6  4  PF02985.17 HEAT repeat


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.1    0.0023       7.9       3      40 ..      67     106 ..      65     107 .. 0.89
   2 !   24.4   0.2   4.6e-09   1.6e-05       7      40 ..     114     147 ..     109     148 .. 0.94
   3 ?   -0.6   0.1      0.34   1.2e+03      20      31 ..     153     164 ..     152     167 .. 0.85
   4 ?   -1.3   0.0      0.59     2e+03      16      38 ..     170     192 ..     168     192 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0023
                 HHHHHHHHCHHHHHHHHHHC..-SSHHHHHHHHHHHHHHH CS
  PF00514.18   3 enkqavieaGavppLvqLLk..sgdeevqeeAawALsNLa 40 
                   + + + +G+  +Lv+ L+  s+    ++e ++AL+ L+
  MMETSP1325-20131115|1784_1  67 ALRPQAVAVGIPAALVESLRrwSDEVTCVRELVGALQTLC 106
                 566777889999************************9998 PP

  == domain 2    score: 24.4 bits;  conditional E-value: 4.6e-09
                 HHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   7 avieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                 +v+ +G+vp L++LL s+d e++  +++++ NL 
  MMETSP1325-20131115|1784_1 114 TVVSSGIVPLLLDLLASPDLETRLLCTATVANLM 147
                 79******************************96 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.34
                 HHC-SSHHHHHH CS
  PF00514.18  20 LLksgdeevqee 31 
                 LL ++d+ vqe+
  MMETSP1325-20131115|1784_1 153 LLLTQDDVVQEV 164
                 89999****997 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 0.59
                 HHHHHHC-SSHHHHHHHHHHHHH CS
  PF00514.18  16 pLvqLLksgdeevqeeAawALsN 38 
                 + ++L ks d+  +++A++A+ N
  MMETSP1325-20131115|1784_1 170 AILDLAKSHDKAERCYAVAAVAN 192
                 66788888888778888888877 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.013        46       8      59 ..       3      76 ..       1     103 [. 0.64
   2 ?   10.8   1.0   0.00012      0.41      32      87 ..     115     190 ..      77     191 .. 0.64

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.013
   PF13646.1  8 LekdpdpevraaaieaLgqlgseea.........lpaLlelLkdsdpevRraAaeaLgkl.............g 59
                L ++pd   +++a+  L++l + ++           aL +l  +++ +v    a+a   l             g
  MMETSP1325-20131115|1784_1  3 LSHSPDKGDQQKAALELSKLVEGTVfpavsfgplAHALCRLVPSEHRDVACYSAKAVKTLllddalrpqavavG 76
                55788888899999999987777666666666668888888899999999999999887645443333333333 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00012
   PF13646.1  32 a.....lpaLlelLkdsdpevRraAaeaLgkl................gdpealpaLlklldddedavvreaaaeaL 87 
                 +     +p+Ll+lL ++d e+R  +    ++l                   + + a+l+l+++ ++a  r+ a++a 
  MMETSP1325-20131115|1784_1 115 VvssgiVPLLLDLLASPDLETRLLCTATVANLmsyadsllltqddvvqEVSQRVGAILDLAKSHDKAE-RCYAVAAV 190
                 244444************************99777766666543333223456788888888877777.78888875 PP

>> PF08389.7  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.5e-05     0.087      47     141 ..      39     136 ..      29     145 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHHHCCS-TTTS-CCCHHHHHHHCHHH..HHHHHHHHHHHHC-TT-...HHHHHHHHHHHHHHCTTS-CHHCHCS.HHHHHCHHCCSCCC..H CS
   PF08389.7  47 riLkvlpeEiadfsrskleqerrnelkdllrsq..vqkilelllqileqsvskksselveatLkclsswvswidiglivnspllsllfqlLndpel..r 141
                  +++++p+E  d+   ++++ +   l d+lr q  +  i   l + l +++++  + + e++    + + + + +  +v+s +++ll++lL +p+l  r
  MMETSP1325-20131115|1784_1  39 ALCRLVPSEHRDVACYSAKAVKTLLLDDALRPQavAVGIPAALVESLRRWSDEV-TCVRELVGALQTLCWDRVAVPTVVSSGIVPLLLDLLASPDLetR 136
                 689******************************999999************998.9999999999999999********************99998443 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.1   3.6e+03      12      20 ..      47      55 ..      36      64 .. 0.52
   2 ?   -1.2   0.0      0.79   2.7e+03      10      18 ..      89      97 ..      81     108 .. 0.76
   3 ?   11.7   0.2   5.8e-05       0.2       1      29 [.     120     148 ..     120     150 .. 0.93
   4 ?    0.2   0.0      0.27   9.4e+02       4      24 ..     170     190 ..     168     192 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.1
                SSHHHHHHH CS
  PF02985.17 12 pspeVReaA 20
                ++ +V + +
  MMETSP1325-20131115|1784_1 47 EHRDVACYS 55
                333444444 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.79
                TSSSHHHHH CS
  PF02985.17 10 nDpspeVRe 18
                +D+   VRe
  MMETSP1325-20131115|1784_1 89 SDEVTCVRE 97
                678888886 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 5.8e-05
                 HHHHHHHHHTSSSHHHHHHHHHHHHHHHH CS
  PF02985.17   1 llPlllkllnDpspeVReaAaeaLgalae 29 
                 ++Plll ll +p+ e R  ++ ++++l++
  MMETSP1325-20131115|1784_1 120 IVPLLLDLLASPDLETRLLCTATVANLMS 148
                 79*********************999987 PP

  == domain 4    score: 0.2 bits;  conditional E-value: 0.27
                 HHHHHHTSSSHHHHHHHHHHH CS
  PF02985.17   4 lllkllnDpspeVReaAaeaL 24 
                 ++l l ++ +   R+ A+ a+
  MMETSP1325-20131115|1784_1 170 AILDLAKSHDKAERCYAVAAV 190
                 588999999999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 889.42
//
Query:       MMETSP1325-20131115|1786_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-10   38.4   0.5    4.8e-05   22.2   0.1    2.6  2  PF00036.27 EF hand
    9.1e-10   38.4   1.4    3.7e-09   36.4   1.0    1.9  1  PF13499.1  EF-hand domain pair
    1.2e-08   33.9   0.1     0.0036   16.9   0.0    2.6  3  PF13405.1  EF-hand domain
    1.7e-08   33.8   0.1     0.0016   17.9   0.1    2.6  2  PF13833.1  EF-hand domain pair
    0.00087   18.4   0.1        1.7    7.9   0.0    3.0  3  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.011   15.2   0.1      0.023   14.3   0.1    1.4  1  PF12763.2  Cytoskeletal-regulatory complex EF hand
      0.028   14.3   0.0        2.9    7.8   0.0    2.1  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   9.5e-06     0.019       2      23 ..      40      61 ..      39      66 .. 0.82
   2 !   22.2   0.1   2.5e-08   4.8e-05       2      28 ..      97     123 ..      96     124 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 9.5e-06
                HHHHHHHHCTTTSSEBEHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfk 23
                ++ +F+++D+D++G ++  E  
  MMETSP1325-20131115|1786_1 40 WRMMFDKLDRDHSGSVERIEVT 61
                789***********99876665 PP

  == domain 2    score: 22.2 bits;  conditional E-value: 2.5e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++ +++ +D+++d  +sfeEf ++l+k
  MMETSP1325-20131115|1786_1  97 FDAIWNQMDVNHDQSVSFEEFTTFLRK 123
                 789*********************997 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   1.0   1.9e-12   3.7e-09       3      65 ..      41     120 ..      35     121 .. 0.90

  Alignments for each domain:
  == domain 1    score: 36.4 bits;  conditional E-value: 1.9e-12
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgsels.................deevrevldyifkelDkngdGvlsfeEflqa 65 
                 + +F++lD+d++g++++ e ++ l+    e                   ++++r++ d+i++++D n+d  +sfeEf ++
  MMETSP1325-20131115|1786_1  41 RMMFDKLDRDHSGSVERIEVTQTLRDPALEPEfaallhselglpdhirrEDGTRDMFDAIWNQMDVNHDQSVSFEEFTTF 120
                 569****************99998764444447********************************************987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       4.9   9.5e+03      20      27 ..       7      14 ..       5      18 .. 0.77
   2 !   14.4   0.0   1.2e-05     0.023       2      28 ..      40      66 ..      39      79 .. 0.89
   3 !   16.9   0.0   1.9e-06    0.0036       2      28 ..      97     123 ..      96     132 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 4.9
                -HHHHHHH CS
   PF13405.1 20 eELrdaLr 27
                +EL+ aL+
  MMETSP1325-20131115|1786_1  7 AELLVALK 14
                58999998 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.2e-05
                HH---GCC-------B---HHHHHHH. CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrk 28
                +r  F+++D+d++G +++ E+ + Lr+
  MMETSP1325-20131115|1786_1 40 WRMMFDKLDRDHSGSVERIEVTQTLRD 66
                6789*****************999985 PP

  == domain 3    score: 16.9 bits;  conditional E-value: 1.9e-06
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 + ++++++D ++d  +++eE+  +Lrk
  MMETSP1325-20131115|1786_1  97 FDAIWNQMDVNHDQSVSFEEFTTFLRK 123
                 77899*********************7 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   1.7e-05     0.033       9      48 ..       8      61 ..       3      67 .. 0.68
   2 !   17.9   0.1     8e-07    0.0016      25      52 ..      95     122 ..      72     123 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.7e-05
   PF13833.1  9 eLkral.allglkg..........lseeev...dilfrefDtdgdGkisfeEFc 48
                eL  al a++g+            +s+ee+   +++f+++D+d++G +   E  
  MMETSP1325-20131115|1786_1  8 ELLVALkASVGVAAapppaanntpPSAEELalwRMMFDKLDRDHSGSVERIEVT 61
                56666666666666666666666666666434479***********99877765 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 8e-07
   PF13833.1  25 eevdilfrefDtdgdGkisfeEFcvlle 52 
                 + +d++ + +D ++d  +sfeEF ++l+
  MMETSP1325-20131115|1786_1  95 DMFDAIWNQMDVNHDQSVSFEEFTTFLR 122
                 55789999***************99986 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       3.6     7e+03      17      21 ..      33      37 ..      33      38 .. 0.84
   2 !    7.3   0.0    0.0014       2.7       5      20 ..      44      59 ..      41      64 .. 0.87
   3 !    7.9   0.0   0.00088       1.7       6      25 .]     102     121 ..     102     121 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 3.6
                -HHHH CS
   PF13202.1 17 sreEL 21
                s+eEL
  MMETSP1325-20131115|1786_1 33 SAEEL 37
                799*9 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0014
                HHHH--S----B-HHH CS
   PF13202.1  5 FrafDlNgDGkIsreE 20
                F+++D + +G + r E
  MMETSP1325-20131115|1786_1 44 FDKLDRDHSGSVERIE 59
                **********998755 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.00088
                 HHH--S----B-HHHHHHHH CS
   PF13202.1   6 rafDlNgDGkIsreELkrlv 25 
                 +++D+N D  +s+eE+ +++
  MMETSP1325-20131115|1786_1 102 NQMDVNHDQSVSFEEFTTFL 121
                 589*************9975 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   1.2e-05     0.023      42      70 ..      94     122 ..      83     125 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-05
   PF12763.2  42 edklekiwdladidedgkldfeefciamr 70 
                  d ++ iw+  d+++d ++ feef+  +r
  MMETSP1325-20131115|1786_1  94 RDMFDAIWNQMDVNHDQSVSFEEFTTFLR 122
                 678899******************98877 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.015        28      57      78 ..      39      62 ..      22      76 .. 0.76
   2 ?    7.8   0.0    0.0015       2.9      60      79 ..     101     120 ..      84     127 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.015
   PF10591.4 57 eW..kFnqlDtnkdkvlsksElap 78
                 W  +F++lD ++ +++++ E+++
  MMETSP1325-20131115|1786_1 39 LWrmMFDKLDRDHSGSVERIEVTQ 62
                44449*************999865 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0015
   PF10591.4  60 FnqlDtnkdkvlsksElapl 79 
                 +nq+D+n+d+++s +E++ +
  MMETSP1325-20131115|1786_1 101 WNQMDVNHDQSVSFEEFTTF 120
                 78999999999999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 758.85
//
Query:       MMETSP1325-20131115|1783_1  [L=469]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     2e-160  534.5  11.6   2.8e-160  534.1   8.1    1.1  1  PF02990.11 Endomembrane protein 70


Domain annotation for each model (and alignments):
>> PF02990.11  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  534.1   8.1    2e-164  2.8e-160     129     520 ..      17     426 ..       2     427 .. 0.93

  Alignments for each domain:
  == domain 1    score: 534.1 bits;  conditional E-value: 2e-164
  PF02990.11 129 ddnrivevevkprsvkes...............scslaeespqelkedeeel......eltftYsVkwkesevkwasRwdkylkaeedaqihwfsiinslvivlfLsglvavillRtlkkdlaryneedeeedkqeesgwklvhgDvfrepr.kskllsilvgsGvqllllvlvvlvlallgflspssrgslltaaillyvllgivagYvsarlyktlkgkkwkrnliltaillpgivfvilfvlNlvlwaksssgavPfstlvvllllwflvsvPLsllGgivgfrkealeeapvrtnqiprqiPeqkwylktllsillaGilpfgaifielffifsslWlekiYylfGflflvfiiLvvvtaevsivltYfqLcaEdyrWwWrsflvsgstavYvflysiyyfvtklkisgf 520
                 + +riv+++v+p s+ +s               +c   +e +q++++ ++ +       + +t+++ w+e +++w++Rwd+yl+   d +ihwfsi ns++iv+fL+ +va+il+Rtl++d+a+yn + ++e+++eesgwklvh+Dvfr+p+ +++l s++vg+Gvql ++++++l +allgflsp++rgsllta++llyv++g +agY+s+r++k ++g+ w rn+ilta+l+p +v +i+fvl + l++++ssgavPfst+++l++lwf+vs PL+++G+++g++kea+ + pvr+n ipr iP+q+wy++++l++l +Gilpfga+ +elffi s+lWl+++Yy+fGflflv++iLv ++ae +i+++YfqLc EdyrWwWrs l+sgs+a Y+flysi yf+t+l+i+g+
  MMETSP1325-20131115|1783_1  17 EGTRIVGFRVEPFSIAHSfdeslpfdkdettlsTC---NEMAQAVNDPANYQqidsptDVIHTFDIAWEEVSTEWSHRWDVYLRGNPDDKIHWFSITNSTMIVVFLTVMVAMILVRTLNSDIAQYNDAATAEEAKEESGWKLVHTDVFRPPTdSPMLYSVMVGTGVQLAMMAVATLGFALLGFLSPANRGSLLTALLLLYVIMGSFAGYYSSRIFKLFRGEDWMRNTILTAFLFPSVVATIFFVLDMCLLFEGSSGAVPFSTFFTLIVLWFGVSTPLVFIGSYFGYKKEAY-KPPVRVNLIPRPIPQQPWYMHPMLTVLFGGILPFGAVSVELFFIMSALWLHQVYYIFGFLFLVMAILVATCAETTILMCYFQLCNEDYRWWWRSLLSSGSCAGYIFLYSIWYFMTELDINGL 426
                 348***************99999998876655323...33444444333333233444699******************************************************************************************9678999*******************************************************************************************************************************999999.***********************************************************************************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       796  (0.0582212); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.63
# Mc/sec: 1783.95
//
Query:       MMETSP1325-20131115|1787_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 1193.48
//
Query:       MMETSP1325-20131115|1785_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-08   33.9   0.1    6.6e-08   32.7   0.1    1.6  2  PF13426.1 PAS domain


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.1   4.9e-12   6.6e-08      44     103 ..       3      62 ..       1      63 [. 0.93
   2 ?   -3.0   0.0      0.62   8.5e+03      71      90 ..     152     171 ..     136     174 .. 0.73

  Alignments for each domain:
  == domain 1    score: 32.7 bits;  conditional E-value: 4.9e-12
   PF13426.1  44 edeeavalleraleaggevevelelrrkdgeefpvevtvtpvrdedgevvgiivilrDit 103
                 +d  +v+++++a+++g +++  + ++r dg+ f+++v ++p+r++dge+v++++++  it
  MMETSP1325-20131115|1785_1   3 TDTTEVERIRNAVSEGVDISSCILNYRIDGSSFWNQVYISPLRNRDGEIVNYVGVQCEIT 62 
                 6677899***********************************************998887 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 0.62
   PF13426.1  71 kdgeefpvevtvtpvrdedg 90 
                 +  ++++  v ++ vr ++g
  MMETSP1325-20131115|1785_1 152 STSSPTWSSVPAASVRARHG 171
                 45678888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.73
# Mc/sec: 646.69
//
Query:       MMETSP1325-20131115|1788_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 227.02
//
Query:       MMETSP1325-20131115|1790_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 443.58
//
Query:       MMETSP1325-20131115|1781_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-05   23.0   0.0    8.2e-05   22.3   0.0    1.3  1  PF05903.9  PPPDE putative peptidase domain
  ------ inclusion threshold ------
      0.051   13.8   0.0      0.089   13.0   0.0    1.3  1  PF03011.10 PFEMP DBL domain


Domain annotation for each model (and alignments):
>> PF05903.9  PPPDE putative peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.2e-08   8.2e-05      31     126 ..     174     281 ..     150     290 .. 0.77

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 1.2e-08
   PF05903.9  31 egi.yhtgvevygkeyalggkekee...sgit.....elkpkt......tsegakfresielgeTevteeevreileelsaeyhgdkYnLiskNCnhFtddlvdlLtgkki 126
                  gi +h g+ v    y++gg ++      g+        +p++      + e ++ +  ++  +T++t++e++++ +   +  +   Y   + NC++F++dl+ +Ltg+++
  MMETSP1325-20131115|1781_1 174 MGIaWHWGLSVGESVYEIGG-SMAVigpRGVVhastpLISPGKaalmgtQLEQFDGYVELDGMSTHLTDDEIENFSRGWVR--RHPIYSVAGPNCQTFAEDLFVFLTGENL 281
                 47889999999999999999.4444467666677777445555444433455555555557789************98888..6789*********************986 PP

>> PF03011.10  PFEMP DBL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.3e-05     0.089      33      57 ..      17      42 ..       9      44 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.3e-05
  PF03011.10 33 kke.CkkkCecvekWvekKkkeWkki 57
                +   C+++C+   +Wv   ++eWk+ 
  MMETSP1325-20131115|1781_1 17 TSGyCENDCDLAGEWVPTRHDEWKNR 42
                3335*******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.34s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 1614.94
//
Query:       MMETSP1325-20131115|1794_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-20   71.6   1.1    6.7e-20   70.8   0.8    1.5  1  PF02678.11 Pirin
    2.4e-15   56.3   0.0    5.5e-15   55.2   0.0    1.6  2  PF05726.8  Pirin C-terminal cupin domain
  ------ inclusion threshold ------
      0.022   14.1   0.3      0.056   12.8   0.2    1.7  1  PF07883.6  Cupin domain
      0.071   12.9   0.0       0.14   12.0   0.0    1.4  1  PF03815.14 LCCL domain


Domain annotation for each model (and alignments):
>> PF02678.11  Pirin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.8     2e-23   6.7e-20      23     107 .]       3      91 ..       1      91 [. 0.84

  Alignments for each domain:
  == domain 1    score: 70.8 bits;  conditional E-value: 2e-23
                 TTB--SS----TT...EEE.-----EEE--S-EEEEEEEE--EEEEE----EEEE----EEEEE-----EEEEE---S.S--EEEEEEEE CS
  PF02678.11  23 ldhfgpaklsage...del.gagfppHpHrgletvtylleGeiehrDslGnkgvirpgdvqwmtAGsGivHsEmpeee.eeslhglQlWv 107
                  d+fgp   + g+   d+  g ++p+HpH g+++++y++eG  +h Ds+Gn+++ ++ ++qwm+ GsGi H E   +  ++s+hg+Q+W+
  MMETSP1325-20131115|1794_1   3 CDEFGPMMST-GAygnDTDeGFDVPWHPHHGMDILSYIVEGVGRHADSMGNRETFQSPGFQWMSVGSGIEHAEGGGTPaGQSTHGFQIWL 91 
                 5666654433.3344433348999*************************************************87666599********6 PP

>> PF05726.8  Pirin C-terminal cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   4.9e+03      19      34 ..      32      47 ..      20      71 .. 0.65
   2 !   55.2   0.0   1.6e-18   5.5e-15       2     103 ..     145     250 ..     144     251 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.4
   PF05726.8 19 gleafvyvleGsgevg 34
                g++ + y++eG g+  
  MMETSP1325-20131115|1794_1 32 GMDILSYIVEGVGRHA 47
                4456779999987543 PP

  == domain 2    score: 55.2 bits;  conditional E-value: 1.6e-18
   PF05726.8   2 ldltleagakfelplpegl.eafvyvleGsgevggersaieeeqlvvlg....dgdsvevkaeekgarvlllaGePlgepvviyGpfVmntkeeieqAfedyregrf 103
                 ld++le+ga+f+   p++  ++++y ++Gsg  ++++ +i  +q++ ++    + +  +v+a+e g r++++ G+  +e+ v++GpfV +++++++q f++ ++g+f
  MMETSP1325-20131115|1794_1 145 LDVELEPGAEFNYVCPSSCdNVMMYGFKGSGILNDDT-PIGSQQIARFNttnpSAQGAKVTAGEGGFRMMVFTGKMTKEKYVWHGPFVCSSRANLMQCFQQVQTGQF 250
                 8*************9998647899************6.***********9998889999**********************************************99 PP

>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   1.7e-05     0.056       8      39 ..      22      55 ..      19      73 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.7e-05
                --EE-EBE-TT-EEEEEEEE--EEEE..E-TEEE CS
   PF07883.6  8 GesapshrHpgedeffyVleGegelt..vdgeev 39
                G + p+h H+g d + y++eG g+    ++++e+
  MMETSP1325-20131115|1794_1 22 GFDVPWHPHHGMDILSYIVEGVGRHAdsMGNRET 55
                4488******************886654444444 PP

>> PF03815.14  LCCL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.1e-05      0.14      12      48 ..     146     183 ..     137     198 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.1e-05
                 ......SSEEEEE------SSS.--B----SEETTS-- CS
  PF03815.14  12 klrkkkgekfavrCpanCseek.asviGskvYssdSsi 48 
                 +++ + g++f++ Cp+ C++ + + ++Gs + ++d++i
  MMETSP1325-20131115|1794_1 146 DVELEPGAEFNYVCPSSCDNVMmYGFKGSGILNDDTPI 183
                 56778899**********8877699**********999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.32s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 1481.38
//
Query:       MMETSP1325-20131115|1795_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-38  131.7  19.7    1.7e-38  131.5  13.6    1.0  1  PF03357.16 Snf7
  ------ inclusion threshold ------
       0.22   10.9   1.6       0.28   10.5   1.1    1.2  1  PF13901.1  Domain of unknown function (DUF4206)
       0.23   10.8   9.0        0.3   10.4   6.2    1.2  1  PF03087.9  Arabidopsis protein of unknown function
        2.5    7.9  10.8          6    6.6   0.6    2.2  2  PF03938.9  Outer membrane protein (OmpH-like)
        3.8    6.5  14.2    5.4e+02   -0.6   9.9    2.3  1  PF05149.7  Paraflagellar rod protein
        4.1    7.0  10.2          8    6.0   7.1    1.6  1  PF07926.7  TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> PF03357.16  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.5  13.6   7.5e-42   1.7e-38       2     168 ..      18     184 ..      17     187 .. 0.97

  Alignments for each domain:
  == domain 1    score: 131.5 bits;  conditional E-value: 7.5e-42
  PF03357.16   2 ailsLrkaerelekkqeslekkikkleaelkklakkgnkdrAlllLkqkkryekqldqldgqlanleqvalaienaksnkevlnamkqgakamkamnkkmdidkidklmdeiedqmekadeisealsrsldda..deedEeeldaeLdaLeqelgdeelesvelpsvPs 168
                 +++ ++ka+rel+++++++e ++kkl a++kk+ak  +++++++ +k+++r++++++++ + +a+l+ v+l+i+  ks+ +++ amk+++ am +mn++++i+ ++k+m+e+++++eka+ ++e+++++ldd+  +e dEee d+++d++++e+g +   ++++p++  
  MMETSP1325-20131115|1795_1  18 NKRMVNKAIRELDRERKRMEGEEKKLIADIKKMAKAEQMAAVKIQAKELVRTRNYITKFIQLRAHLNGVLLKIQCVKSHEAMASAMKSTTGAMIKMNQQFSIPGLQKIMMEFQRENEKAELTQEMMGDTLDDVmdEEGDEEEQDKIVDQVLDEIGVNF--GEQIPEAAA 184
                 78899*********************************************************************************************************************************999******************999..899988765 PP

>> PF13901.1  Domain of unknown function (DUF4206)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.1   0.00012      0.28      25     125 ..      24     128 ..      12     147 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00012
   PF13901.1  25 rilenwdfkkypvskaakellesiee....kplldlkelnpslykkvkeLakvrelrkklkllkeylktCreaeeekkelkqsreylleeaelysladLvevkkg 125
                 + ++++d +++++  + k+l++ i++    + +  +k   ++l+++ + ++k  +lr +l+ +   +++ +++e+  + +k+++  +++ ++ +s+  L+++   
  MMETSP1325-20131115|1795_1  24 KAIRELDRERKRMEGEEKKLIADIKKmakaEQMAAVKIQAKELVRTRNYITKFIQLRAHLNGVLLKIQCVKSHEAMASAMKSTTGAMIKMNQQFSIPGLQKIMME 128
                 5677888888888888888887665411126788999999***************************777777778888899999**************998754 PP

>> PF03087.9  Arabidopsis protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   6.2   0.00013       0.3      67     203 ..      13     146 ..       7     168 .. 0.68

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00013
   PF03087.9  67 saLRrkksgdlesevkaYvasrkklkkeikkllkslkktktk..vvnnnedqesasavvdvleetvsvtvsvlrsvlsfLstktkkskkikssllsekkvkkgeesssqsirselerldeekkrdeeeekkilkeleel 203
                   +R++k   +++++++  + rk +  e kkl+  +kk+ +      ++ + ++ +++ + + + ++   + l+ vl+ ++  +k+++   ++ ++++ +   ++ ++q     l+++ +e++r++e+++ +++++  +
  MMETSP1325-20131115|1795_1  13 DLIRQNK-RMVNKAIRELDRERKRMEGEEKKLIADIKKMAKAeqMAAVKIQAKELVRTRNYITKFIQL-RAHLNGVLLKIQC-VKSHE--AMASAMKSTTGAMIKMNQQFSIPGLQKIMMEFQRENEKAELTQEMMGDT 146
                 5678888.559****************************98544222222222344444444333333.3445666666665.55555..4555555555555555666678889999999999888888888877655 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   2.2     0.004       9.2      35      88 ..      12      64 ..       9      81 .. 0.70
   2 ?    6.6   0.6    0.0026         6      27      91 ..      92     161 ..      85     172 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.004
   PF03938.9 35 kelqaklqeeakekqqelqakkkelqkeqknlqseraqlsaeaekakeeelqak 88
                k+l ++ + + ++  +el++++k ++ e+k+l ++ +++++++ +  + ++qak
  MMETSP1325-20131115|1795_1 12 KDLIRQNKRMVNKAIRELDRERKRMEGEEKKLIADIKKMAKAE-QMAAVKIQAK 64
                5566666666778888888888888888888888866666553.3334444444 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0026
   PF03938.9  27 vlkaspkykelqaklqeeakekqqe.....lqakkkelqkeqknlqseraqlsaeaekakeeelqakeqe 91 
                 ++k++++++++++     + +++q+     lq+   e+q+e ++ +  ++ + + + + + ee +++eq+
  MMETSP1325-20131115|1795_1  92 CVKSHEAMASAMKSTTGAMIKMNQQfsipgLQKIMMEFQRENEKAELTQEMMGDTLDDVMDEEGDEEEQD 161
                 7899999999999999999999999999999999999977777777777777777777777766666664 PP

>> PF05149.7  Paraflagellar rod protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   9.9      0.24   5.4e+02      74     133 ..      10      69 ..       4     173 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.24
   PF05149.7  74 eLrkLaeerrelvedrieaeeeEekRredyesFlkvaeqhkqrLektlenldaalelars 133
                  L++L ++ +++v++ i++ ++E+kR e+ e+ l +  ++ ++ e++ +   +a+el+r 
  MMETSP1325-20131115|1795_1  10 PLKDLIRQNKRMVNKAIRELDRERKRMEGEEKKLIADIKKMAKAEQMAAVKIQAKELVRT 69 
                 5999************************99988877777777777777777777777765 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   7.1    0.0035         8       3      97 ..      17     137 ..      15     171 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0035
   PF07926.7   3 aeisslkeelkrlesqiaaieeqiqklkdDlenqaeiareaqdk.YerelikhaetiqeLtklkkelaelqkeaselrkeadsakael.........................neleekwe 97 
                 ++++++++ + +l+++++++e + +kl+ D++++a+  + a  k   +el++    i +  +l++ l+ +  +++ +++    a+a                           ++++ek e
  MMETSP1325-20131115|1795_1  17 QNKRMVNKAIRELDRERKRMEGEEKKLIADIKKMAKAEQMAAVKiQAKELVRTRNYITKFIQLRAHLNGVLLKIQCVKSHEAMASAMKsttgamikmnqqfsipglqkimmefQRENEKAE 137
                 778899999***************************999999994468*******************988877776666544444333345666666666666666665555544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1584  (0.115857); expected 273.4 (0.02)
Passed bias filter:                      691  (0.0505413); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.49
# Mc/sec: 997.67
//
Query:       MMETSP1325-20131115|1796_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00016   20.4   4.9    0.00017   20.3   3.4    1.1  1  PF07690.11 Major Facilitator Superfamily
     0.0015   17.0  10.1     0.0023   16.4   4.9    1.8  2  PF00083.19 Sugar (and other) transporter
  ------ inclusion threshold ------
      0.022   14.2   0.1      0.026   13.9   0.1    1.1  1  PF02654.10 Cobalamin-5-phosphate synthase


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   3.4   3.7e-08   0.00017      39     104 ..       6      73 ..       2      98 .. 0.87

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 3.7e-08
  PF07690.11  39 tlyslgyaiasllaGrlsdrfGrrrvlllglllfalglllll.fa..sslwalllvlrvlqGlgagalf 104
                 +  ++g++++s +++++++ +Grr v++ + ++  +g + l+ f+  s  +++l ++ +l G+++g++ 
  MMETSP1325-20131115|1796_1   6 ASLLFGSSLSSAPGSYFMECYGRRFVFVGTCFIVMVG-VGLAeFSliSKDFVTLNIAAFLVGFAQGIGQ 73 
                 4566799******************************.99999866799999************99875 PP

>> PF00083.19  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   4.9   4.9e-07    0.0023      50     119 ..       3      72 ..       2      74 .. 0.96
   2 !    9.1   0.3   8.4e-05      0.38     353     391 ..      58      96 ..      53     100 .] 0.90

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 4.9e-07
  PF00083.19  50 livssflvgaliGslfaglladrfGRkksllvalvlfvigavlqaaakakksvwvlivgRvivGlgvGli 119
                 ++v+s+l+g+  +s  ++++++ +GR+ +++ +++++++g+ l  ++   k +  l ++ ++vG++ G+ 
  MMETSP1325-20131115|1796_1   3 ISVASLLFGSSLSSAPGSYFMECYGRRFVFVGTCFIVMVGVGLAEFSLISKDFVTLNIAAFLVGFAQGIG 72 
                 579********************************************9889***************9986 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 8.4e-05
  PF00083.19 353 vfillfiaffalgwgpvpwvlvsElfpqsvRpkalaiav 391
                   i+ f+  fa g+g  + ++v E++ + ++p+a++++ 
  MMETSP1325-20131115|1796_1  58 LNIAAFLVGFAQGIGQFYRFAVVEVSEPYPKPIAISFVI 96 
                 56899*******************************976 PP

>> PF02654.10  Cobalamin-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   5.7e-06     0.026     148     204 ..      10      64 ..       3      76 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 5.7e-06
  PF02654.10 148 lsrpleeGlGayfiekldskdvliglllllllavkllaievegliavlvavliglll 204
                 +   l +  G+yf+e   +++v++g+ +++++ v l+      +   +v++ i+++l
  MMETSP1325-20131115|1796_1  10 FGSSLSSAPGSYFMECYGRRFVFVGTCFIVMVGVGLAE--FSLISKDFVTLNIAAFL 64 
                 555677889***********************999986..34444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|1791_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-28   98.8  15.5    2.8e-28   98.3  10.7    1.1  1  PF03357.16 Snf7
  ------ inclusion threshold ------
      0.093   12.7   4.8       0.26   11.3   2.1    2.2  2  PF05837.7  Centromere protein H (CENP-H)
       0.94    8.6   6.8       0.25   10.5   2.3    1.8  2  PF10368.4  Putative cell-wall binding lipoprotein
        1.2    9.1  10.8       0.67    9.8   5.4    2.1  2  PF11068.3  Protein of unknown function (DUF2869)


Domain annotation for each model (and alignments):
>> PF03357.16  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.3  10.7   8.2e-32   2.8e-28       7     170 ..      24     187 ..      19     188 .. 0.97

  Alignments for each domain:
  == domain 1    score: 98.3 bits;  conditional E-value: 8.2e-32
  PF03357.16   7 rkaerelekkqeslekkikkleaelkklakkgnkdrAlllLkqkkryekqldqldgqlanleqvalaienaksnkevlnamkqgakamkamnkkmdidkidklmdeiedqmekadeisealsrsldda..deedEeeldaeLdaLeqelgdeelesvelpsvPsee 170
                 +k++r++e+++  l++++k+l ae+k +akk++++++++l+kq +++++q++++ g++a++ +v +++ ++ ++   +na   + ka+ a+n +md     k m+++++q+e+++  +e+++++l da  d+e E+e d ++ + ++e+g +    ++++++P+++
  MMETSP1325-20131115|1791_1  24 QKSQRDIEREIAGLDRQEKQLVAEIKVAAKKNQEKTVRILAKQVVQLRNQREKMIGMKAHVGAVGMQASTMAATAGAVNAVGAASKAIGAVNAQMDAAGMSKAMMDFQRQIEVMGVKEEMMDEALADAfdDDEIEDEADGIVAKTLAEIGVDL--DASMADAPTTQ 187
                 799****************************************************************************************************************************9999999*****************99..********997 PP

>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.1   7.7e-05      0.26      12      70 ..      20      77 ..      16      89 .. 0.83
   2 ?    0.5   0.0      0.18     6e+02       7      69 ..     115     178 ..     109     188 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 7.7e-05
   PF05837.7 12 sretreeLsdvekerlqlkqknrelvrellelkkkkesdredeelkeklekleaelkks 70
                 r t++   d+e+e   l +++++lv+e++ ++kk++++     l++++ +l+++++k 
  MMETSP1325-20131115|1791_1 20 KRTTQKSQRDIEREIAGLDRQEKQLVAEIKVAAKKNQEKTV-RILAKQVVQLRNQREKM 77
                578899999**********************9999998888.67777777777776665 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.18
   PF05837.7   7 nlqqasretreeLsdvekerlqlkqknrelvrellelkkkkesdre.deelkeklekleaelkk 69 
                 n+q  +  +++ ++d +++   ++ k++ + + l ++ +++e ++e d  +++ l+++  +l +
  MMETSP1325-20131115|1791_1 115 NAQMDAAGMSKAMMDFQRQIEVMGVKEEMMDEALADAFDDDEIEDEaDGIVAKTLAEIGVDLDA 178
                 5566667778888888888888888777777777777777777777666666666666666655 PP

>> PF10368.4  Putative cell-wall binding lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.3   7.3e-05      0.25      36      84 ..      29      78 ..      14      85 .. 0.85
   2 ?   -2.2   0.0      0.57     2e+03      47      49 ..     140     142 ..     103     168 .. 0.52

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 7.3e-05
   PF10368.4 36 eeqkkleelEkkeqelyeqi.ielnkddneeikklseeavenvekRekll 84
                +   +++ l+++e++l+ +i +++ k++ +++  l++++v+  ++Rek++
  MMETSP1325-20131115|1791_1 29 DIEREIAGLDRQEKQLVAEIkVAAKKNQEKTVRILAKQVVQLRNQREKMI 78
                55678899***********966778888889999**************87 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.57
   PF10368.4  47 keq 49 
                 ke+
  MMETSP1325-20131115|1791_1 140 KEE 142
                 222 PP

>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.4    0.0002      0.67      20      80 ..      18      79 ..      11     104 .. 0.73
   2 ?    0.6   2.6      0.14   4.7e+02      26      96 ..      57     144 ..      52     153 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0002
   PF11068.3 20 elqeelqeqleqleqelqqLefqkkkalkeikkqsa.qqieeiqqqvekekakreeqkkqll 80
                 ++++ q+  + +e+e++ L+ q+k++++eik     +q++ ++   ++  + r+++ k++ 
  MMETSP1325-20131115|1791_1 18 SVKRTTQKSQRDIEREIAGLDRQEKQLVAEIKVAAKkNQEKTVRILAKQVVQLRNQREKMIG 79
                567888999999*******************9777644444555444444444444444444 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.14
   PF11068.3  26 qeqleqleqelqqLefqkkkalkeikkqsa..................qqieeiqqqvekekakreeqkkqllqqleqvqeLelgsevk 96 
                 ++ ++ l +++ qL+ q  k++    +  a                   +  ++   v+++++     k+++++q +q++ + + +e++
  MMETSP1325-20131115|1791_1  57 EKTVRILAKQVVQLRNQREKMIGMKAHVGAvgmqastmaatagavnavGAASKAIGAVNAQMDAAGMSKAMMDFQ-RQIEVMGVKEEMM 144
                 566777889999999999999988776666777777777777777666555556666777777777777777776.4566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1300  (0.0950848); expected 273.4 (0.02)
Passed bias filter:                      492  (0.035986); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.77
# Mc/sec: 697.12
//
Query:       MMETSP1325-20131115|1797_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00042   19.5  32.6      0.065   12.7   0.5    4.6  4  PF02809.15 Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.5   4.8e-06     0.065       4      17 ..      49      62 ..      49      63 .. 0.94
   2 !   12.1   4.9     7e-06     0.096       3      18 .]     140     155 ..     137     155 .. 0.77
   3 !    5.9   3.7   0.00073        10       4      17 ..     170     183 ..     170     184 .. 0.88
   4 !    2.5   0.1    0.0089   1.2e+02       3      12 ..     245     254 ..     244     255 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.8e-06
                HHHHHHHHHHHHHH CS
  PF02809.15  4 EedLqlALalSlee 17
                +++L+ AL++S+ee
  MMETSP1325-20131115|1797_1 49 DPELAMALRVSMEE 62
                89***********9 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 7e-06
                 CHHHHHHHHHHHHHHH CS
  PF02809.15   3 EEedLqlALalSleea 18 
                 E + Lq+ALa+S+++a
  MMETSP1325-20131115|1797_1 140 EQALLQQALAMSMQDA 155
                 34469*********96 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.00073
                 HHHHHHHHHHHHHH CS
  PF02809.15   4 EedLqlALalSlee 17 
                 +++ q AL++S++ 
  MMETSP1325-20131115|1797_1 170 DDEMQMALQMSMQA 183
                 78899*******95 PP

  == domain 4    score: 2.5 bits;  conditional E-value: 0.0089
                 CHHHHHHHHH CS
  PF02809.15   3 EEedLqlALa 12 
                 +++ +q+AL+
  MMETSP1325-20131115|1797_1 245 DDPLIQAALQ 254
                 799******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.41s 00:00:01.06 Elapsed: 00:00:00.48
# Mc/sec: 1377.91
//
Query:       MMETSP1325-20131115|1798_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-08   31.6   0.0    1.3e-07   31.1   0.0    1.2  1  PF00650.15 CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0   9.6e-12   1.3e-07     105     159 .]       2      56 ..       1      56 [. 0.89

  Alignments for each domain:
  == domain 1    score: 31.1 bits;  conditional E-value: 9.6e-12
  PF00650.15 105 ivnaPklfkvafklvkpfldektreKikfvspsntpatlekyidpeqlpkelGGt 159
                 + naP l+++++  v pfl+e+t++Kik++ ++  +    + +++++lp e GG+
  MMETSP1325-20131115|1798_1   2 VTNAPALINMLMAAVNPFLPEATKKKIKITRTNGGDILEAQGVPRDRLPRECGGS 56 
                 68****************************777764455688************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 702.93
//
Query:       MMETSP1325-20131115|1799_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       819  (0.0599035); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1056.35
//
Query:       MMETSP1325-20131115|1801_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-13   50.9   3.5    1.4e-13   50.5   2.4    1.2  1  PF10458.4  Valyl tRNA synthetase tRNA binding arm
  ------ inclusion threshold ------
      0.078   13.0   0.9        4.6    7.3   0.1    2.2  2  PF05008.10 Vesicle transport v-SNARE protein N-terminus


Domain annotation for each model (and alignments):
>> PF10458.4  Valyl tRNA synthetase tRNA binding arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   2.4   2.1e-17   1.4e-13       3      66 .]      54     117 .]      52     117 .] 0.96

  Alignments for each domain:
  == domain 1    score: 50.5 bits;  conditional E-value: 2.1e-17
   PF10458.4   3 ekeraRLeKelaklekeierlqkKLsnpgFvakAPaeVVeeekaklaeleeqleklkerLsqLk 66 
                  +e+a+ +Ke++ l+  i++l+ K++np++++ APa+ Ve+ +aklae++ +++  ++ L+ L+
  MMETSP1325-20131115|1801_1  54 SSEIAKCNKEIKMLTPLIKKLEAKMANPKYLETAPAATVEKDRAKLAEYSGKRDEAEKTLKSLQ 117
                 579*********************************************************9986 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0    0.0048        33      20      46 ..      49      76 ..      37      82 .. 0.84
   2 ?    7.3   0.1   0.00067       4.6      11      44 ..      83     116 ..      81     117 .] 0.90

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0048
  PF05008.10 20 g.eerkaalreiekkldeaeellkqMel 46
                g  ++++ ++++ k+++ +  l+k++e 
  MMETSP1325-20131115|1801_1 49 GmVDKSSEIAKCNKEIKMLTPLIKKLEA 76
                555899*******************996 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.00067
  PF05008.10  11 klaslsklsgeerkaalreiekkldeaeellkqM 44 
                  l+++++++ e+ +a+l+e+  k deae  lk++
  MMETSP1325-20131115|1801_1  83 YLETAPAATVEKDRAKLAEYSGKRDEAEKTLKSL 116
                 5788999999*******************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.55
# Mc/sec: 509.77
//
Query:       MMETSP1325-20131115|1802_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|1803_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-50  170.9   4.0    4.2e-50  170.6   2.8    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.6   2.8     3e-54   4.2e-50     275     486 ..      15     259 ..       3     261 .. 0.88

  Alignments for each domain:
  == domain 1    score: 170.6 bits;  conditional E-value: 3e-54
  PF00118.19 275 rrvkkedlerlakltgatavsrl.....esleeedlGkakkveeeeigedkttlieg.....................est.............lsgkvatillrgateveldeleraiedalravkaalkdegvvpGGGaaelelskkLreeaks.lsgkeqlgieifakAleaipktLaeNagldpkevlaklkaahkkgenlgidaetgeiidlveagilDplkvkrsalksavevasliLtidqiika 486
                    +k+ l+++a ltga++vs++     e+++ee lG +kk+   +i++d+ ++++g                                     l g++a+i+++gate+e+ e+++++ dal+a++aa++ eg+vpGGG a+l +sk L++ a + ++ ++++g+ei+ +A++a++  +  Nag ++  ++ +l++  +++ ++g++a+tge++++++agi+Dp+kv+r+a+  a ++asl++t ++++ +
  MMETSP1325-20131115|1803_1  15 GDNRKATLQDIAVLTGAQVVSEDvglklENVTEEHLGVCKKA---TISKDDAIILDGsgekdaidercdlirdavartG-SeyekeklqerlakLAGGIAVIKVGGATETEVGEKKDRVVDALNATRAAVE-EGIVPGGGKALLWASKNLKDVAAQaDNMDQRIGVEIVERAIRAPVMAISSNAGAEGAVICGELLK--SDDSKFGYNAQTGEYVNMMDAGIIDPAKVVRTAVVDASSIASLMMTAEAMVAD 259
                 4459*******************997777777766*******...**********998888887766666666655550.05555566666777*************************************.******************9877664788899**********************************..8899*********************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 1501.72
//
Query:       MMETSP1325-20131115|1804_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-08   33.9   0.1    3.3e-08   33.2   0.0    1.3  1  PF08719.6 Domain of unknown function (DUF1768)


Domain annotation for each model (and alignments):
>> PF08719.6  Domain of unknown function (DUF1768)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   2.4e-12   3.3e-08      15     155 ..      26     161 ..      17     163 .. 0.70

  Alignments for each domain:
  == domain 1    score: 33.2 bits;  conditional E-value: 2.4e-12
   PF08719.6  15 nlypspftvdgvkfptaehymqaqKall.fedeeaaakila....aespkeakklgrk.vpnfdearkdWekvkeevvvegllakfeqneelrelLlsTgdrelveaspsDrvWGiglnaesaildeenwrGkNlLGkalmevReel 155
                 n+  +pf+++g  f + e+++qa K++    ++ a+ +i+     ++s   ++   r  + + ++ r++ ++ k   ++e+++ak++++++lr  Ll+Tgd+e+       + W    +        ++w  + + G++ m +Reel
  MMETSP1325-20131115|1804_1  26 NFQCRPFEYEGMLFYSCEQAYQALKFVPgSAERRALVAIRPnvdeTNSAHGMRCWQRGqRGSKASFRRNFDAIKVTTMLEVNRAKYKAHADLRADLLATGDAEIKGGPS--TCWRFRGK-------DHKW--QYWNGRIQMLIREEL 161
                 677899********************98423333344444311115555555555554433345566699********************************9854433..45655444.......3345..555566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1288.04
//
Query:       MMETSP1325-20131115|1807_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-06   28.3   0.0    1.2e-06   28.0   0.0    1.1  1  PF13306.1 Leucine rich repeats (6 copies)


Domain annotation for each model (and alignments):
>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   9.1e-11   1.2e-06      52     105 ..      13      64 ..       3      87 .. 0.53

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 9.1e-11
   PF13306.1  52 yaFsncssltsitipssltsigenaFsncsslksinipsslttigssaFsncsl 105
                  aF  c+ l+s+++p s t+ig ++F  cs l+ +++p  l+++g++aF +++ 
  MMETSP1325-20131115|1807_1  13 GAFGCCEALSSVSLP-SATTIGHKTFWACSRLRYVSLP-ALKKLGDEAFWGTEF 64 
                 455555555555554.3345555555555555555553.455555555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 723.90
//
Query:       MMETSP1325-20131115|1793_1  [L=503]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.81u 0.33s 00:00:01.14 Elapsed: 00:00:00.50
# Mc/sec: 2410.74
//
Query:       MMETSP1325-20131115|1808_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00095   18.6   0.0     0.0018   17.6   0.0    1.5  1  PF08954.6 Domain of unknown function (DUF1900)


Domain annotation for each model (and alignments):
>> PF08954.6  Domain of unknown function (DUF1900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.4e-07    0.0018     100     132 ..       8      40 ..       1      44 [. 0.88

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.4e-07
   PF08954.6 100 selfqeDlYpdtaatepaltaeeWlsGknkqpk 132
                 +++f++D+Y +t++   + +++ WlsG+n +p 
  MMETSP1325-20131115|1808_1   8 KKFFMDDVYVPTRSRAVSQEVDGWLSGANVAPA 40 
                 589**************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       670  (0.0490053); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 649.01
//
Query:       MMETSP1325-20131115|1810_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 374.43
//
Query:       MMETSP1325-20131115|1809_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-14   52.1   0.0    2.1e-13   50.5   0.0    1.6  2  PF13460.1 NADH(P)-binding
    1.4e-08   34.6   0.0    2.2e-08   33.9   0.0    1.3  1  PF08547.7 Complex I intermediate-associated protein 30 (CIA30)


Domain annotation for each model (and alignments):
>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.31   2.1e+03     159     179 ..      65      87 ..      48      89 .. 0.72
   2 !   50.5   0.0     3e-17   2.1e-13      90     181 ..     111     212 ..      95     213 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.31
   PF13460.1 159 e..gdpagesaisraDvAaalvd 179
                 +  + p++e +++ a vA+a+++
  MMETSP1325-20131115|1809_1  65 GyhNLPTNEMSVKTAAVASAAAK 87 
                 14467899999999999999875 PP

  == domain 2    score: 50.5 bits;  conditional E-value: 3e-17
   PF13460.1  90 vrrlvvvsaaglyr.dkpglfelldkplf......keylrakaaaeelleasgldwtivrPaalfeaeettyelite...gdpagesaisraDvAaalvdel 181
                 ++ ++++s++g+ r +++gl++ +++p++      + +l +k +ae+l+++sgl++ti+rP al+e+e++   ++++   g+  +++++sr+DvA+ +v +l
  MMETSP1325-20131115|1809_1 111 TPTFIYLSSTGVTRpERQGLDMAKEPPAVrldsmlGGVLTWKLRAEDLVRDSGLPYTIIRPVALTEEEGGAPIVFDQgdsGQIYQGGKVSRDDVAELCVAAL 212
                 56799*******99788888777777777999999*********************************886666666232445577*************986 PP

>> PF08547.7  Complex I intermediate-associated protein 30 (CIA30)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   3.2e-12   2.2e-08     110     156 ..       2      59 ..       1      60 [. 0.93

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 3.2e-12
   PF08547.7 110 tvkipfsdfvptfrGrvvedape.ldlskiksigllls..........dkqegpfeLe 156
                 +v+ip++df+p++rG++v++++e l++++i +i+l+ls           +qegpf+L 
  MMETSP1325-20131115|1809_1   2 DVQIPWADFRPVNRGKTVKKPKEpLNTERIMAIQLMLSkfefdgrlnpTFQEGPFSLG 59 
                 699***************988666**********************9999*****995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 1337.97
//
Query:       MMETSP1325-20131115|1811_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.1  17.2      0.015   14.1  11.9    1.1  1  PF04684.8  BAF1 / ABF1 chromatin reorganising factor
      0.034   12.3  17.4      0.034   12.3  12.1    1.2  1  PF03276.9  Spumavirus gag protein
      0.034   13.5   1.0      0.044   13.1   0.7    1.2  1  PF04281.8  Mitochondrial import receptor subunit Tom22
      0.088   11.3   0.3       0.11   11.0   0.2    1.1  1  PF09913.4  Predicted membrane protein (DUF2142)
       0.49    8.4  24.7       0.45    8.5  17.1    1.0  1  PF09770.4  Topoisomerase II-associated protein PAT1
       0.65    7.4  31.9       0.75    7.2  22.1    1.1  1  PF13779.1  Domain of unknown function (DUF4175)
        1.2    6.5   7.8        1.2    6.6   5.4    1.0  1  PF12722.2  High-temperature-induced dauer-formation protein
        1.3    7.4  13.5        1.3    7.4   9.4    1.1  1  PF05091.7  Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
        1.5    8.5  18.1        1.8    8.2  12.6    1.2  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        1.8    9.2  10.6          3    8.5   7.4    1.3  1  PF08576.5  Eukaryotic protein of unknown function (DUF1764)
        1.9    7.7  11.0        1.8    7.7   7.6    1.1  1  PF08190.7  pre-RNA processing PIH1/Nop17
        2.4    7.4   8.6        2.8    7.1   6.0    1.1  1  PF13486.1  Reductive dehalogenase subunit
        2.9    7.5   4.7          3    7.5   3.3    1.1  1  PF02932.11 Neurotransmitter-gated ion-channel transmembrane region
        3.1    7.4   6.7        4.4    6.9   4.7    1.2  1  PF08496.5  Peptidase family S49 N-terminal
        6.1    5.2   7.6        7.3    4.9   5.3    1.0  1  PF04499.10 SIT4 phosphatase-associated protein
        6.5    6.0   7.4        8.1    5.7   5.2    1.3  1  PF11947.3  Protein of unknown function (DUF3464)
        6.7    6.2  13.3        8.1    5.9   9.3    1.2  1  PF05843.9  Suppressor of forked protein (Suf)
        7.5    4.6   7.4        7.8    4.5   5.1    1.0  1  PF08192.6  Peptidase family S64
        8.2    5.8   7.6        9.5    5.6   5.3    1.2  1  PF01956.11 Integral membrane protein DUF106
        8.8    5.2  17.3         11    4.9  12.0    1.1  1  PF13203.1  Putative metallopeptidase domain
        9.2    4.1  25.6        9.9    4.0  17.7    1.0  1  PF07793.6  Protein of unknown function (DUF1631)


Domain annotation for each model (and alignments):
>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1  11.9   2.2e-05     0.015     297     371 ..       7      81 ..       2     123 .. 0.52

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.2e-05
   PF04684.8 297 hqhqhqqqrdvqhqhqqqsqdqhqeqhqshvdsdnnvyqdrigsisdqdeaavhnlddtnvrvaaaaaaaaaaal 371
                 +q q+qqqr +q+q qqq+q ++q+ +q+   + ++  q   +++    +  ++ l++   r aa+  aaa aa 
  MMETSP1325-20131115|1811_1   7 QQRQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKDRMYALQQLGARSAASRGAAAVAAN 81 
                 333444444444444433333222222222233333333333333334444455555555555444333333332 PP

>> PF03276.9  Spumavirus gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  12.1   5.2e-05     0.034     451     510 ..       7      63 ..       2     131 .. 0.63

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.2e-05
   PF03276.9 451 rGrgqrgrrsqpqeerrqqnsgrrssqpqrqqqdrsnqnnqrqsqvqnegergsggYnlR 510
                 + r+q+++r+q+  ++rqq++ rr++qpq+q   + +q++q  +q+q+ g+ + + Y l 
  MMETSP1325-20131115|1811_1   7 QQRQQQQQRRQQ--QQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQE-GSYKDRMYALQ 63 
                 333333333333..3444455555555555555443333333333332.44444555554 PP

>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.7   6.8e-05     0.044      11      63 ..      12      65 ..       4      97 .. 0.55

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.8e-05
   PF04281.8 11 eeq.ekeaaakekaeeesddeeedeedtdsdisddsdve..edEtlldRivALkDi 63
                ++q ++++++++++++++++ +++++ +  + ++    +  ++ +  dR++AL+ +
  MMETSP1325-20131115|1811_1 12 QQQrRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAM--NqaQEGSYKDRMYALQQL 65
                222223333333333333334444444444444444..344888999******986 PP

>> PF09913.4  Predicted membrane protein (DUF2142)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   0.00017      0.11      52     110 ..      12      70 ..       2      80 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00017
   PF09913.4  52 paaanadlsafrpevsaactyrsleneaatrakskvgtfksaayppllYlpqalGiaig 110
                 +++++ + +  ++++ + +++ + +++aa +++ +++++++ +y+  +Y++q lG + +
  MMETSP1325-20131115|1811_1  12 QQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKDRMYALQQLGARSA 70 
                 22777788888889999999999999************99999***********98755 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  17.1    0.0007      0.45     248     299 ..       7      58 ..       1     118 [. 0.46

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0007
   PF09770.4 248 qlpqlsqqmppqpvqppqqqqqqvlklpqaqppplqqlsaspqlaqqqlasl 299
                 q+ q++qq  +q+++++qqq++q+++++qa p+++qq++a+ q ++++++ +
  MMETSP1325-20131115|1811_1   7 QQRQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKDR 58 
                 1111111111111111112222222222333333333333333333333222 PP

>> PF13779.1  Domain of unknown function (DUF4175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  22.1    0.0011      0.75     611     710 ..       7     104 ..       3     128 .. 0.38

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0011
   PF13779.1 611 lqeqqnaqqgeqqgeegqgqqgqgqqgqqqgqgqgqqqgqqgeegqqeeeslaerqqalreeleklk.kelkgeggeageaaeealgeAeeaMedAeeaLg 710
                 +q+qq++q+++qq++++q+q +q+q++   +q +   q+qq+  +q +e+s ++r  al++   +   ++   +   ++  +      A   M +A   L+
  MMETSP1325-20131115|1811_1   7 QQRQQQQQRRQQQQRQQQQQRRQQQPQ---QQATPAAQQQQQAMNQAQEGSYKDRMYALQQLGARSAaSRGAAAVAANAATPATRTTPAFGTMAEALADLR 104
                 122222222222222222222222222...22222223333333333444444444444433333220122222222223333333444444444444444 PP

>> PF12722.2  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.4    0.0018       1.2     606     666 ..       7      65 ..       2     128 .. 0.56

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0018
   PF12722.2 606 elkeksnqkkkkeaksesisnleksnssestrsesnnndsrsasssevpeekkslaitdde 666
                 +++++++q+  +++++ ++++++++++ +++ ++ ++++++ ++++++ + k+ + + ++ 
  MMETSP1325-20131115|1811_1   7 QQRQQQQQR--RQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKDRMYALQQL 65 
                 222333222..23334444444444444555555555666666666666655555444443 PP

>> PF05091.7  Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   9.4     0.002       1.3      84     142 ..       8      58 ..       3     112 .. 0.48

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.002
   PF05091.7  84 aketklekkkrrgkqrtaqarnqkaqeee.....geetskkakrgaqrkqkrlqkkrgkrlgar 142
                 ++++++++++++++q+++q+r+q++q++      +            ++q+++q  +++  ++r
  MMETSP1325-20131115|1811_1   8 QRQQQQQRRQQQQRQQQQQRRQQQPQQQAtpaaqQ------------QQQAMNQA-QEGSYKDR 58 
                 33333334444444444444444444433333331............22222222.22222222 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  12.6    0.0027       1.8     146     197 ..       8      56 ..       2     129 .. 0.40

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0027
                 XXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXX......X CS
   PF03153.8 146 lqqslgapassqasslqqqpaplksneesqeqqqpgkeiqqqqtdgasdde...k 197
                 ++q++ ++       +qqq+++ ++++++q+qqq  ++ qqqq+  ++ +e   k
  MMETSP1325-20131115|1811_1   8 QRQQQQQR------RQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEgsyK 56 
                 11111111......11111111111222222222222222222222222211111 PP

>> PF08576.5  Eukaryotic protein of unknown function (DUF1764)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   7.4    0.0046         3      22      84 ..       8      68 ..       3      77 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0046
   PF08576.5 22 eakkkekkkkekaeekakkpkatkkkkkkkkkkeekkeveeekkrrrtedGlpvyseeeLkig 84
                +++++++++++++++++++ ++++++++ + +++++++  ++ ++  ++d  + y  + L+++
  MMETSP1325-20131115|1811_1  8 QRQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKD--RMYALQQLGAR 68
                33444444444444455555555566666666777777777777777888..88888888765 PP

>> PF08190.7  pre-RNA processing PIH1/Nop17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   7.6    0.0028       1.8     178     234 ..       6      59 ..       1     112 [. 0.48

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0028
   PF08190.7 178 klpasppsqvkkqkesgkliqevlsektqeaskkaksklieeiesaeiqspeptkpe 234
                 +++ ++++q ++q++ ++++q+  ++++q+a+++a+++ ++ +++  +q+  +++  
  MMETSP1325-20131115|1811_1   6 QQQRQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQ-QQAMNQ--AQEGSYKDRM 59 
                 33333333333333333333333222222222222221.111111..1222233333 PP

>> PF13486.1  Reductive dehalogenase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   6.0    0.0043       2.8      34     145 ..      11     101 ..       2     109 .. 0.35

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0043
   PF13486.1  34 ekslakkppeaefkevggeealkaeleekkkrlkekikeefpgwtlrdirdtaLssaaksgllgsiekgkrvekilsaalkksdsllgpkkaktpeelgvpkWeGTPEENlr 145
                 +++ ++++++++ ++ ++++++ +++++ ++++++++ ++ ++ +++d r +aL++                  + + ++++        +a+tp ++  p + GT  E+l 
  MMETSP1325-20131115|1811_1  11 QQQ-QRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKD-RMYALQQ------------------LGARSAASRGAAAVAANAATPATRTTPAF-GTMAEALA 101
                 111.11111111122222222223333333333333333333333333.4444443..................33333222222222345666666555554.55555555 PP

>> PF02932.11  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.3    0.0046         3     110     148 ..      10      54 ..       2     128 .. 0.44

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0046
                 -----------------------------------.......... CS
  PF02932.11 110 mkrpstakqnqakknesakksanssrleselgkepkk......sq 148
                 +++++  +q+q++++++++++++++++ ++ +++++       ++
  MMETSP1325-20131115|1811_1  10 QQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAmnqaqeGS 54 
                 222222222222222222222222222222211111111111111 PP

>> PF08496.5  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.7    0.0068       4.4      54     107 ..      11      66 ..       2      75 .. 0.38

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0068
   PF08496.5  54 lkeeleealldkeelkalekeekkeekekkkaekkkakkae..ekkprlfvldFkG 107
                 ++++ +++   ++++++++++ ++++  +++++++++++a+  + k r++ l+  G
  MMETSP1325-20131115|1811_1  11 QQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQegSYKDRMYALQQLG 66 
                 11111111111111111111111111112222222333333334788888877555 PP

>> PF04499.10  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   5.3     0.011       7.3     246     345 ..       9     103 ..       3     114 .. 0.44

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.011
  PF04499.10 246 kerDaererlleelqkaleeeeeseeeaedtsadaeqdsaedkreleasnasedseeededdeeseeseeseesaaelteeklrsdpvvgDylkiklvel 345
                 +++ ++r +++++ q+++++++    + +++ + a+q++++  +++++ + ++ + + ++  + s+ s+  +  aa++  +++r+ p  g +  ++l++l
  MMETSP1325-20131115|1811_1   9 RQQQQQRRQQQQRQQQQQRRQQ----QPQQQATPAAQQQQQAMNQAQEGSYKDRMYALQQLGARSAASRGAAAVAANAATPATRTTPAFGTM-AEALADL 103
                 2222222222222222222211....111111111133333333333334444455555555555555555555788888888888888654.3455555 PP

>> PF11947.3  Protein of unknown function (DUF3464)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.2     0.012       8.1       6      46 ..       9      49 ..       3      95 .. 0.54

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.012
   PF11947.3  6 krlpfepkkkrkkaekklrktaetekaekksaskekkkkkk 46
                ++++++++++++++++++r++++ +++++ +a+++++  ++
  MMETSP1325-20131115|1811_1  9 RQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQ 49
                22222222222222222222222222222223333222222 PP

>> PF05843.9  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   9.3     0.012       8.1     202     239 ..       9      46 ..       2      92 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.012
   PF05843.9 202 kpdklqraegrqleqqkksesakseeaasqsqkqqqqq 239
                 + ++ qr +++q +qq+++ +++++++a++ ++qqqq 
  MMETSP1325-20131115|1811_1   9 RQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQA 46 
                 22222222222222222222222222222222222222 PP

>> PF08192.6  Peptidase family S64
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   5.1     0.012       7.8      13      81 ..      11      83 ..       4     128 .. 0.43

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.012
   PF08192.6 13 ekeekesedvsrdseenkalkssssesqsslaelealkesedas....tkaaasvqsssifskgslnlnpsis 81
                +++++ +++++++++++++++++++ +   +++++a+++ ++ s      a +++ + s  s+g++++ +++ 
  MMETSP1325-20131115|1811_1 11 QQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSykdrMYALQQLGARSAASRGAAAVAANAA 83
                2222222222333333333333333222222222222222222200002222333333334444444433333 PP

>> PF01956.11  Integral membrane protein DUF106
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   5.3     0.015       9.5      46      88 ..       7      49 ..       2     101 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.015
  PF01956.11 46 kkrekeiqkrarelqkngdklklkklekrkeelkedqkemmme 88
                ++r+++ q+r+++ ++++++ ++++ +++ +   ++q++ m +
  MMETSP1325-20131115|1811_1  7 QQRQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQ 49
                4444444444444444444444444444444333333333322 PP

>> PF13203.1  Putative metallopeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  12.0     0.017        11     148     243 ..       8     103 ..       2     109 .. 0.71

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.017
   PF13203.1 148 kqsdsstdggdgsgesegqgeqdskknrkdapekakvralakgesadlaespegksapeaeaeearewrerlaraleagraaGklpgaLarlladl 243
                 +++++++ + +++ ++++q++q++ +++  ++ ++++ a+ + ++   ++   ++++ +a ++  r + +++a+a+  ++    ++g++a+ ladl
  MMETSP1325-20131115|1811_1   8 QRQQQQQRRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKDRMYALQQLGARSAASRGAAAVAANAATPATRTTPAFGTMAEALADL 103
                 223333333444445556666666666666667777777777788888888888888888888888899999999999999999999999999997 PP

>> PF07793.6  Protein of unknown function (DUF1631)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0  17.7     0.015       9.9     217     314 ..       3     108 ..       1     130 [. 0.59

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.015
   PF07793.6 217 Pelksa.......aqprtkaesagsasqaapaasgastdsaaeaqgaaesadleavfaaLqellaqlrsasaaaa.aaaaqaagqaqalsseeLlalLsslQ..qaap 314
                 P  +++       +q++++++++++++q++++++ ++++++++a ++a++   ++ + aLq+l a + +++ aaa aa+a +++  ++ +  ++ ++L+ l   +  p
  MMETSP1325-20131115|1811_1   3 PAAQQQrqqqqqrRQQQQRQQQQQRRQQQPQQQATPAAQQQQQAMNQAQEGSYKDRMYALQQLGARSAASRGAAAvAANAATPATRTTPAFGTMAEALADLRavN--P 108
                 5555553333233344444444444555555555555555555555555555599999*****999999998888555555556666666678888888888332..2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2798  (0.204652); expected 273.4 (0.02)
Passed bias filter:                     1229  (0.0898917); expected 273.4 (0.02)
Passed Vit filter:                       356  (0.0260386); expected 13.7 (0.001)
Passed Fwd filter:                        57  (0.0041691); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.96u 0.53s 00:00:01.49 Elapsed: 00:00:00.71
# Mc/sec: 459.02
//
Query:       MMETSP1325-20131115|1812_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 388.84
//
Query:       MMETSP1325-20131115|1814_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-21   74.1   0.3      6e-21   73.9   0.2    1.1  1  PF01133.12 Enhancer of rudimentary
  ------ inclusion threshold ------
      0.038   13.2   1.1      0.045   13.0   0.8    1.1  1  PF03945.9  delta endotoxin, N-terminal domain
      0.052   13.0   0.2      0.075   12.5   0.1    1.3  1  PF02996.12 Prefoldin subunit
       0.17   11.9   2.0        2.8    8.0   1.0    2.6  3  PF02999.9  Borrelia orf-D family


Domain annotation for each model (and alignments):
>> PF01133.12  Enhancer of rudimentary
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.9   0.2   1.8e-24     6e-21       2      80 ..      14      90 ..      13      94 .] 0.91

  Alignments for each domain:
  == domain 1    score: 73.9 bits;  conditional E-value: 1.8e-24
                --EEEEE-SSSS----EEEEESSHHHHH---HHHHHHHHHTT-SS-SS----HHHHHHHHHHSS---EEEE-TTTS-EE CS
  PF01133.12  2 shtilLvqtskkkesrtfadyesvnealegiCklyeeklkkknPsakeitydisqlfefiDkladlsilvyekstktyl 80
                +ht+lLv ++ +   ++++ ++s+ +ale + +lye+klk++nP+a++itydis+l ++iD+l+d++++v++++   y 
  MMETSP1325-20131115|1814_1 14 THTVLLVSETPQ--NKSYTVHNSTIKALEQVINLYERKLKEMNPQATNITYDISDLNNYIDSLSDMTMMVLDERQGLYE 90
                79****977765..56788899**************************************************9988886 PP

>> PF03945.9  delta endotoxin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.8   1.3e-05     0.045     163     214 ..      27      83 ..       5      83 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.3e-05
   PF03945.9 163 yynellerikeYtdhcvnwYnkgLnklr.lgtn.keswnkynry...rremtLtvLD 214
                    ++ + + +  ++ +n Y+++L++++ + tn ++++ + n+y     +mt++vLD
  MMETSP1325-20131115|1814_1  27 KSYTVHNSTIKALEQVINLYERKLKEMNpQATNiTYDISDLNNYidsLSDMTMMVLD 83 
                 3344556666778999************8444556677777777222579******9 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.2e-05     0.075      74     116 ..      38      80 ..      34      84 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.2e-05
                 EHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH---HHHHHHH CS
  PF02996.12  74 sleeAiellkkkleelekqlekleeeleklkdqittleanlaq 116
                  le+ i l+++kl+e++ q ++++ ++ +l + i++l ++  +
  MMETSP1325-20131115|1814_1  38 ALEQVINLYERKLKEMNPQATNITYDISDLNNYIDSLSDMTMM 80 
                 578999******************************9988765 PP

>> PF02999.9  Borrelia orf-D family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.26     9e+02      73      84 ..       6      17 ..       1      23 [. 0.77
   2 ?    8.0   1.0   0.00082       2.8      55      90 ..      27      62 ..       6      69 .. 0.83
   3 ?    3.8   0.0     0.017        58      65      88 ..      58      81 ..      56      86 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.26
   PF02999.9 73 iykeyiektkpi 84
                 + +y++kt+++
  MMETSP1325-20131115|1814_1  6 NFSKYLKKTHTV 17
                578899998876 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.00082
   PF02999.9 55 lstlkdeqsikelknnikiykeyiektkpiaekvYk 90
                 s   ++ +ik+l + i++y++ ++ ++p a+++  
  MMETSP1325-20131115|1814_1 27 KSYTVHNSTIKALEQVINLYERKLKEMNPQATNITY 62
                45666789*********************9988754 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.017
   PF02999.9 65 kelknnikiykeyiektkpiaekv 88
                +++ + i+ +++yi+    +++ v
  MMETSP1325-20131115|1814_1 58 TNITYDISDLNNYIDSLSDMTMMV 81
                678999999*****9998888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1108  (0.0810415); expected 273.4 (0.02)
Passed bias filter:                      859  (0.0628291); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.48s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 417.14
//
Query:       MMETSP1325-20131115|1817_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 292.89
//
Query:       MMETSP1325-20131115|1816_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00015   20.3   0.0    0.00045   18.7   0.0    1.8  2  PF05783.6 Dynein light intermediate chain (DLIC)


Domain annotation for each model (and alignments):
>> PF05783.6  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   3.3e-08   0.00045      96     153 ..       3      60 ..       1      71 [. 0.93
   2 ?   -1.4   0.0     0.039   5.4e+02     208     292 ..      91     169 ..      59     190 .. 0.55

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 3.3e-08
   PF05783.6  96 nvwildGdlyhkgllkfaleaeslkdtlvilvvdlsrPWtileslqkWasvlrehidk 153
                  +w l G    ++l+   ++ +++++ ++ +vvdls+P  ++ +l +W+ ++r  +d+
  MMETSP1325-20131115|1816_1   3 HIWELGGGARLRNLVSVPITPQNIAHNVAAIVVDLSKPENLVSDLCEWIGIVRARVDE 60 
                 5899999999*******************************************99986 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.039
   PF05783.6 208 dvlttnlGlpvvvvvtkcdavsvlekehdyrdehfdfiqshirrfclqyGaallytsvkeeknldllykylvhkiyglpfrtpal 292
                   ++  l +p++++  k d  + +e  +         i + +r      Ga+ll    +++   + l   l++ ++    +    
  MMETSP1325-20131115|1816_1  91 ARIVDPLAIPLLIIANKYDIYKDMESVQK------KTICQALRFIAHSNGATLLTVGARDKASQNNLRMQLTQLLFRTSSSKKVE 169
                 45566677888888888777655553322......23455555555555555555555555555555555555555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       728  (0.0532475); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.62
# Mc/sec: 1144.07
//
Query:       MMETSP1325-20131115|1819_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.46   10.5   3.8        1.1    9.3   0.1    2.7  3  PF09333.6 ATG C terminal domain


Domain annotation for each model (and alignments):
>> PF09333.6  ATG C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.4     0.031   4.3e+02      15      32 ..     124     141 ..      36     154 .. 0.69
   2 ?    0.9   0.1     0.032   4.4e+02      15      39 ..     124     148 ..     111     169 .. 0.76
   3 ?    9.3   0.1   7.7e-05       1.1       3      46 ..     172     215 ..     170     233 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.031
   PF09333.6  15 eGlakAysslreglkdta 32 
                  G akA  +++e+ kdt 
  MMETSP1325-20131115|1819_1 124 RGAAKAAAVVSEKAKDTH 141
                 345555555555555555 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.032
   PF09333.6  15 eGlakAysslreglkdtaqtllava 39 
                  G akA  +++e+ kdt +++ +  
  MMETSP1325-20131115|1819_1 124 RGAAKAAAVVSEKAKDTHESVRKSV 148
                 6889999999999999988886644 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 7.7e-05
   PF09333.6   3 rslyanqPadlreGlakAysslreglkdtaqtllavasevheqk 46 
                 r+  +n P++l  + ++A +s++ g+  +++++ ++a++  +  
  MMETSP1325-20131115|1819_1 172 RESLSNAPTNLSVAAKSAGDSFKSGVAGAKDAVTNLAARAATGG 215
                 5667899***************************9999976533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       573  (0.0419105); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.41s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1119.84
//
Query:       MMETSP1325-20131115|1815_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-16   59.9   0.4    2.7e-16   59.4   0.3    1.2  1  PF00550.20 Phosphopantetheine attachment site
     0.0009   19.2   0.1     0.0012   18.7   0.1    1.2  1  PF07377.7  Protein of unknown function (DUF1493)
  ------ inclusion threshold ------
      0.069   12.4   0.1       0.08   12.2   0.1    1.2  1  PF01434.13 Peptidase family M41


Domain annotation for each model (and alignments):
>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.3   5.9e-20   2.7e-16       2      67 .]      43     109 ..      42     109 .. 0.94

  Alignments for each domain:
  == domain 1    score: 59.4 bits;  conditional E-value: 5.9e-20
  PF00550.20   2 klleivaevlgldpdeidldtdlf.elGlDSllaveliarleeefgveipvedlfelptlaelaayl 67 
                 kl+ ivae+lg++++ ++ d+++  +lG DSl++ve++ ++eeefgv+ip e   e ++la+ ++++
  MMETSP1325-20131115|1815_1  43 KLVGIVAEQLGVEESKVTNDANFAnDLGADSLDVVEMVMKIEEEFGVDIPDERAEEVQNLADAVKLI 109
                 7999*******999*********967*********************************99988765 PP

>> PF07377.7  Protein of unknown function (DUF1493)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.1   2.7e-07    0.0012       2      60 ..      38      92 ..      36      98 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 2.7e-07
   PF07377.7  2 dsiekeilefvreeagtklfkkkkeltldtdleedLkldgddaeellekffkkFnVdls 60
                 ++e +++ +v+e+ g+    +++++t d +  +dL++d  d+ e++ k +++F Vd+ 
  MMETSP1325-20131115|1815_1 38 GEVETKLVGIVAEQLGV----EESKVTNDANFANDLGADSLDVVEMVMKIEEEFGVDIP 92
                6789999999*****98....69*********************************975 PP

>> PF01434.13  Peptidase family M41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.8e-05      0.08      64     117 ..      16      73 ..      10     107 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.8e-05
                 XXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXX..XXXXXXX CS
  PF01434.13  64 Gltlflpeedkll..ltkeqllariavllgGraaEelifgedevttGas..nDlekvt 117
                 G   f+p +  +   +t  +++ ++ + l G +aE+l  +e++vt+ a+  nDl   +
  MMETSP1325-20131115|1815_1  16 GANAFVPANRMWGarMTSVKMFGEVETKLVGIVAEQLGVEESKVTNDANfaNDLGADS 73 
                 7778888888765669999**************************9995448886544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 576.15
//
Query:       MMETSP1325-20131115|1822_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-13   50.1   0.0    5.5e-13   49.4   0.0    1.3  1  PF02338.14 OTU-like cysteine protease
  ------ inclusion threshold ------
      0.052   13.3   0.2      0.085   12.6   0.1    1.3  1  PF12353.3  Eukaryotic translation initiation factor 3 subunit G


Domain annotation for each model (and alignments):
>> PF02338.14  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0     8e-17   5.5e-13       1     126 []     102     224 ..     102     224 .. 0.82

  Alignments for each domain:
  == domain 1    score: 49.4 bits;  conditional E-value: 8e-17
                 -----HHHHHHHHHH-----HHHHHHHHHHSS--HHHH--------.-----.....................-HHHHHHHHHHHHHHTS-EEE-----------------B--TTS-GGGS--S-EEE--BTTB- CS
  PF02338.14   1 pgDGnCLfhavsqqlwldhdgrkekheelrealveylrehrelfee.fleeee.........eeYlkeiskdgewgeeieifalahilrrpiivlkssggealvyikfggkylplekppsiclsspgvlgydgaHy 126
                 pgDG+CLfh+++++l + +         lr+ + + +  h e++   +  +++         + Y++ ++++ +wg++iei++++ + +++++v++  gg+    i+    ++p +  p ++l++ g     + Hy
  MMETSP1325-20131115|1822_1 102 PGDGSCLFHSLAYGLKGTSA------GSLRTLILDFMSAHPEELVSgAKISDWvmwdsntsvSAYVAGMRSTTAWGGAIEIAVCSMVRQCTVHVYEGAGGGKHRRISA--FDHPHTGAPVVNLVYGG-----RVHY 224
                 79*************96665......69*****999996665543303333336777788999********************************9988887666554..56899999999999998.....8888 PP

>> PF12353.3  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.2e-05     0.085      97     122 ..      34      59 ..      14      63 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.2e-05
   PF12353.3  97 kkkkkkklvkCriCkgdHfttkCPyk 122
                 k+kkkk++  C +C+g H t +CP+ 
  MMETSP1325-20131115|1822_1  34 KAKKKKSMGPCDACDGPHSTDECPHY 59 
                 78999999****************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 950.28
//
Query:       MMETSP1325-20131115|1824_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.71
# Mc/sec: 637.90
//
Query:       MMETSP1325-20131115|1823_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 865.62
//
Query:       MMETSP1325-20131115|1818_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-36  122.5   0.7    1.1e-35  121.3   0.5    1.6  1  PF01466.14 Skp1 family, dimerisation domain
    7.7e-16   57.7   0.4    1.7e-15   56.6   0.1    1.8  2  PF03931.10 Skp1 family, tetramerisation domain
    1.5e-05   24.8   0.3      0.017   15.0   0.0    2.2  2  PF00651.26 BTB/POZ domain


Domain annotation for each model (and alignments):
>> PF01466.14  Skp1 family, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.3   0.5   2.4e-39   1.1e-35       2      78 .]     137     213 ..     136     213 .. 0.98

  Alignments for each domain:
  == domain 1    score: 121.3 bits;  conditional E-value: 2.4e-39
  PF01466.14   2 kewDaeFlevdeetLfdlilAAnyLnikgLldlackkvAdmikgktpeeiRelfnIendftpeeeeeirkenewaee 78 
                 +ew a+++ev++etLf+lilAAny++ik Lldl+c++vA+mikgktpe iR++fnI ndftpeee+++r+en+w+ee
  MMETSP1325-20131115|1818_1 137 QEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEDIRKTFNIVNDFTPEEEAQVREENKWCEE 213
                 79*************************************************************************96 PP

>> PF03931.10  Skp1 family, tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.1   3.7e-19   1.7e-15       1      64 [.      53     115 ..      53     117 .. 0.93
   2 ?   -2.5   0.0         1   4.8e+03      22      37 ..     170     185 ..     169     194 .. 0.73

  Alignments for each domain:
  == domain 1    score: 56.6 bits;  conditional E-value: 3.7e-19
                 -EEEEEE----EEEEEHHHHCTSHHHHHHT..CTTGGG--....CEEETTS-HHHHHHHHHHHHHC CS
  PF03931.10   1 klikLtSsDgeefeverevakqsktikaml..edlgvddenerdpiplpnvtskiLekviewCkkh 64 
                 k++ L+S+ g++f+ve++vak+s  +k+m+  e++g++d+   ++iplpnv+s iL kv e+Ck++
  MMETSP1325-20131115|1818_1  53 KMVDLVSQEGDNFQVEKRVAKMSELVKTMIpeEEDGETDQ---QEIPLPNVKSVILGKVMEFCKHY 115
                 6899**************************7778888888...59*******************98 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1
                 TSHHHHHHTCTTGGG- CS
  PF03931.10  22 qsktikamledlgvdd 37 
                 ++ t++ m+++ + +d
  MMETSP1325-20131115|1818_1 170 TCATVASMIKGKTPED 185
                 6889999998876665 PP

>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.6e-06     0.017       5      71 ..      49     112 ..      46     125 .. 0.87
   2 !    9.0   0.2   0.00027       1.2      47     103 ..     116     170 ..     111     177 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 3.6e-06
                 HHTT-S--EEEEETTTEEEEE-HHHHHHH-HHHHHHTTTTTTTT-SEEEEEETTS-HHHHHHHHHHH CS
  PF00651.26   5 reqgelcDvtlvvgdgkefkahkavLaarSpyFkalftggeieestvseieledvepevfealLefi 71 
                 ++ g+++D++ + gd   f++ k v a  S+  k++  ++e+ e +++ei+l++v+  ++++++ef+
  MMETSP1325-20131115|1818_1  49 EDDGKMVDLVSQEGD--NFQVEKRV-AKMSELVKTMIPEEEDGETDQQEIPLPNVKSVILGKVMEFC 112
                 567788999999886..8***9997.999***********99999999*****************98 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00027
                 TT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC.ECCHHHHHHHHHHHHT-HHHHCHH CS
  PF00651.26  47 eestvseieledvepevfealLefiYtgeleitseenveelLaaadllqiprlkdac 103
                 +e+ ++eie +  + + ++++++  Y   +e++ +e++ el+ aa++++i+ l d  
  MMETSP1325-20131115|1818_1 116 CEEPMNEIE-KPLKSSNMHEVVQEWYANYVEVE-QETLFELILAANYMDIKPLLDLT 170
                 677788887.9999******************6.*****************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       544  (0.0397894); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.57
# Mc/sec: 884.17
//
Query:       MMETSP1325-20131115|1825_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          7    5.7  12.1        9.7    5.2   8.4    1.4  1  PF05285.7 SDA1


Domain annotation for each model (and alignments):
>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   8.4   0.00071       9.7      79     175 ..       4     114 ..       1     184 [. 0.53

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.00071
   PF05285.7  79 eeekkkkeeeegleseedddee..WdvdsdeededeDe...egewvdvesdeeeessDsedeeeesee..................eeeeeesekkkkeesdeekseeeeeeaaeeeeee 175
                 e+++++ +ee+  e+++ ++++  W + ++e++ +eD     g+             D+ede+e++e                    +    s kk+++ s++  + e+e++ +++ee+ 
  MMETSP1325-20131115|1825_1   4 EQQHGS-HEEQHTEQQHTEQHNqrWAA-HEEAAAEEDFedpYGDPYGA-------HWDEEDEDEDEEVeypggaqfsdglerapdgVKRPPFSIKKWHDVSKAYVDPEDEKDYKDTEEAH 114
                 233333.33333333333333346955.33333333321123333333.......33444443333334445566777777776652333333444555555555555554444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       819  (0.0599035); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1089.66
//
Query:       MMETSP1325-20131115|1820_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-37  127.1   0.1    8.7e-37  126.6   0.1    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   0.1   6.4e-41   8.7e-37       2     154 ..      50     205 ..      49     207 .. 0.82

  Alignments for each domain:
  == domain 1    score: 126.6 bits;  conditional E-value: 6.4e-41
                 XXXXXXXXXXXXXXXXXXX.---......-TTTTT--------TTT-----------------.-.S--TT--.STT-----.--S-TT.THHHH---HHHHHHHHTT-----------------------------------STTT----TTTTT------ CS
  PF00504.16   2 paeldgslpgdlgfDplglskdp......tlkrlreaEliHGRvAMlavlGalvpelltklsa.a.skfaelpawaeaggls.lptllalqillligflelareqelkapesegsekraypGglgfdplglakdeeekaelklkEiknGRlAMiaflgfvvq 154
                 p  ldgs++gd+gfDplgls ++      ++k++reaEl HGRvA la+lG+++p +  ++++ a ++f el a+a+   +  +p+++++qi +++g+le++r q+  + ++ ++  +   G+ gf+p+g++ ++ee +e++l Eik++RlAM++ lg++ q
  MMETSP1325-20131115|1820_1  50 PPSLDGSMIGDVGFDPLGLSMNTeympfeSIKWYREAELQHGRVAQLAWLGFVFPNIY-HFPSdAtHNFGELNALAA---VRaVPQWGLVQIAIFVGALEAQRFQKCIKGDNAAG--DVGLGQGGFNPFGFEYTQEEYEEKQLQEIKHCRLAMLGALGVWWQ 205
                 889*****************88889*******************************77.433302022222222322...2249999999****************987655543..34467778*********************************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1188.19
//
Query:       MMETSP1325-20131115|1826_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 492.84
//
Query:       MMETSP1325-20131115|1830_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   14.5   0.1      0.019   14.5   0.1    1.9  2  PF07417.7 Transcriptional regulator Crl


Domain annotation for each model (and alignments):
>> PF07417.7  Transcriptional regulator Crl
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.4     0.022     3e+02      51      58 ..       7      14 ..       3      20 .. 0.79
   2 ?   14.5   0.1   1.4e-06     0.019      50      88 ..      19      61 ..      14      69 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.022
   PF07417.7 51 efwGWWle 58
                ++wG+W++
  MMETSP1325-20131115|1830_1  7 NYWGYWIT 14
                79****97 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 1.4e-06
   PF07417.7 50 RefwGWWleleateerfe....yeyqiGrydkeGeWvaekikk 88
                 ++wG+W++  a +++ +      y  G +  eG+W++++ ++
  MMETSP1325-20131115|1830_1 19 TNYWGYWITSAADQHSHQllglLDYLSGAFASEGHWRQTAHPE 61
                579*****9998888876333358*************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.62
# Mc/sec: 293.75
//
Query:       MMETSP1325-20131115|1827_1  [L=393]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-25   86.8   0.0    2.3e-24   85.6   0.0    1.6  1  PF13847.1  Methyltransferase domain
    3.2e-12   46.6   0.0    5.7e-12   45.8   0.0    1.4  1  PF08241.7  Methyltransferase domain
    5.1e-11   43.0   0.0      8e-11   42.4   0.0    1.3  1  PF12847.2  Methyltransferase domain
      9e-10   38.3   0.0    1.5e-09   37.5   0.0    1.3  1  PF13489.1  Methyltransferase domain
    2.9e-09   37.0   0.0    1.5e-08   34.8   0.0    2.1  2  PF13649.1  Methyltransferase domain
    1.6e-07   31.6   0.0    2.9e-07   30.7   0.0    1.5  1  PF08242.7  Methyltransferase domain
    1.6e-05   24.0   0.0    3.2e-05   23.0   0.0    1.4  1  PF01209.13 ubiE/COQ5 methyltransferase family
    7.7e-05   22.2   0.0    0.00012   21.5   0.0    1.3  1  PF01135.14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
     0.0009   19.1   0.0     0.0017   18.2   0.0    1.5  1  PF13659.1  Methyltransferase domain
  ------ inclusion threshold ------
       0.12   11.5   0.0       0.19   10.8   0.0    1.2  1  PF08123.8  Histone methylation protein DOT1


Domain annotation for each model (and alignments):
>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.6   0.0   1.7e-27   2.3e-24       4     144 ..     105     250 ..     102     269 .. 0.90

  Alignments for each domain:
  == domain 1    score: 85.6 bits;  conditional E-value: 1.7e-27
   PF13847.1   4 gikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAke....raqklgfe..nveFiqgdieelekl.le.esfDlvisnevlnaladpqkvlkeiervlkpggrlivespsllaelpeeleelsklkaevlegakignqkeev 144
                 g+ vlDlG+G+G++++ +a ++gp++ v+G+D+++e++  Ake     +q  g+   n++F +g ie l  + +e +s+Dl isn+v+n++++++kvl+ + + l++gg+++ +++ + + lp+ ++e   +  e+l ga      e++
  MMETSP1325-20131115|1827_1 105 GLDVLDLGSGSGRDCYLAAAMVGPNGSVTGVDMTQEQLDTAKEhvddFTQAMGYPkpNLRFVKGMIEFLGDAgVEpNSIDLAISNCVINLSPNKEKVLQGVYDSLREGGEFYFSDVYVDRRLPQAVREHDIMLGECLGGAL---YVEDF 250
                 788****************************************66655678899999*************************************************************************98888888776...33333 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   4.1e-15   5.7e-12       1      95 []     109     217 ..     109     217 .. 0.95

  Alignments for each domain:
  == domain 1    score: 45.8 bits;  conditional E-value: 4.1e-15
   PF08241.7   1 LdvGcGtglllealaer..paarvtgvDlseemlatakerlkeegle.........lvvadaeel...pfednsfDvvvssevlehledpekalkeiaRvLkpgGllvi 95 
                 Ld+G+G+g+ + + a    p+++vtgvD+ +e+l+take+ ++             +v++ +e l    +e ns+D+ +s++v++  ++ ek+l+ ++  L++gG +++
  MMETSP1325-20131115|1827_1 109 LDLGSGSGRDCYLAAAMvgPNGSVTGVDMTQEQLDTAKEHVDDFTQAmgypkpnlrFVKGMIEFLgdaGVEPNSIDLAISNCVINLSPNKEKVLQGVYDSLREGGEFYF 217
                 8********99999999************************9998779*************88887779************************************9986 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.0   5.8e-14     8e-11       3     109 ..     106     217 ..     104     220 .. 0.83

  Alignments for each domain:
  == domain 1    score: 42.4 bits;  conditional E-value: 5.8e-14
   PF12847.2   3 krilDlGcGtGslslelar.lrpgakvvgvDpseeslelarena....ks.ldleeriellqgda.keelsller..fDavllkgltldallal.deprrvlealpkllkpggrlvi 109
                   +lDlG+G+G+ +  +a    p++ v+gvD  +e l+ a+e++    ++     ++++++ g + +  ++  e+  +D+++ ++     ++ l +++++vl+ +++ l+ gg + +
  MMETSP1325-20131115|1827_1 106 LDVLDLGSGSGRDCYLAAAmVGPNGSVTGVDMTQEQLDTAKEHVddftQAmGYPKPNLRFVKGMIeFLGDAGVEPnsIDLAISNC-----VINLsPNKEKVLQGVYDSLREGGEFYF 217
                 569********77644444478**********************77664435555**********66655555559*********.....9*********************98765 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.0   1.1e-12   1.5e-09      22     160 ..     104     262 ..      82     264 .. 0.75

  Alignments for each domain:
  == domain 1    score: 37.5 bits;  conditional E-value: 1.1e-12
   PF13489.1  22 pggrvLDiGcGtGillellaen.gf..dvtgvDpspaaigkakqaqksqfdeedaaepag..................kfdlivarevlehvpdpeellrqiaellkpgGylllstpnaslasdeafakwdylvprgthisffsaeslkelleeaGfeiv 160
                  g  vLD+G+G+G+ + l a+  g+  +vtgvD   ++   ak  +++ +++++  +p+                   + dl +++ v++  p+ e++l+ +++ l++gG +++s+  ++ + ++a  + d +  +    + +  e++k+++ ++Gf +v
  MMETSP1325-20131115|1827_1 104 DGLDVLDLGSGSGRDCYLAAAMvGPngSVTGVDMTQEQLDTAKEHVDDFTQAMGYPKPNLrfvkgmieflgdagvepnSIDLAISNCVINLSPNKEKVLQGVYDSLREGGEFYFSDVYVDRRLPQAVREHDIMLGE-CLGGALYVEDFKRICAKVGFMDV 262
                 5669**********99988554488778******77666666666666665566444444666667777777777777**************************************87665555555444444443.55566666889999999998665 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.0   1.1e-11   1.5e-08       1     101 []     108     213 ..     108     213 .. 0.84
   2 ?   -1.0   0.0       1.5     2e+03       4      35 ..     279     309 ..     276     331 .. 0.77

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 1.1e-11
   PF13649.1   1 ildlGCGsGrviraltraldkgpeqrvigvDiseealelakerlss..kgl......kvkfvqadaralp...feegefdlvvcaglslehlspkqlealleeiarvlkpgG 101
                 +ldlG+GsGr+ + ++ ++  gp+ +v+gvD ++e+l++ake++++  + +      + +fv++ ++ l     e +++dl ++ +++++  s +  e++l+ + + l++gG
  MMETSP1325-20131115|1827_1 108 VLDLGSGSGRDCYLAAAMV--GPNGSVTGVDMTQEQLDTAKEHVDDftQ-AmgypkpNLRFVKGMIEFLGdagVEPNSIDLAIS-NCVINL-S-PNKEKVLQGVYDSLREGG 213
                 79**************999..8889*******************99752.1466777*********99953336778*******.897765.5.455788999999999887 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 1.5
   PF13649.1   4 lGCGsGrviraltraldkgpeqrvigvDisee 35 
                 + CG ++ +   +r+++ + e+++++ D+ + 
  MMETSP1325-20131115|1827_1 279 ALCGQAEFVSITYRCFKLK-EMETLCEDYGQV 309
                 5599999999999999666.588877777654 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   2.1e-10   2.9e-07       1      98 [.     109     214 ..     109     215 .. 0.83

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 2.1e-10
   PF08242.7   1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakren...nnnnnvnlealdlldldgg...........ssfDvvvasnvlhhlkdirevldnirklLkpgGv 98 
                 L++G+G+G+     ++   p+ ++tgvD  +++++ ake++ +  +   +   n+++ +                    +s D+++++ v++  +++++vl+ +++ L+ gG 
  MMETSP1325-20131115|1827_1 109 LDLGSGSGRDCYLAAAMVgPNGSVTGVDMTQEQLDTAKEHVDDFTQamgYPKPNLRFVKG-------MieflgdagvepNSIDLAISNCVINLSPNKEKVLQGVYDSLREGGE 214
                 8*********999999889***************99999988877511134444555444.......244444679************************************7 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   2.3e-08   3.2e-05      47     150 ..     104     216 ..      96     224 .. 0.85

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 2.3e-08
  PF01209.13  47 rgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegki......nieflqanaeeLpfed...dsfDvvtvsfGlrnv.tDklkaLkeayrvlkpGGrlv 150
                  g +vlD+ +G+g   +  + +vg +g v+++D+ ++ L+++++++ + ++       n++f+++  e L       +s D+ ++s  + n+ ++k+k+L+ +y  l+ GG+++
  MMETSP1325-20131115|1827_1 104 DGLDVLDLGSGSGRDCYLAAAMVGPNGSVTGVDMTQEQLDTAKEHVDDFTQAmgypkpNLRFVKGMIEFLGDAGvepNSIDL-AISNCVINLsPNKEKVLQGVYDSLREGGEFY 216
                 6889*********9999999**************************987766677899*********999754332389996.57777777527999**************998 PP

>> PF01135.14  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   8.7e-08   0.00012      74     124 ..     105     155 ..     102     215 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 8.7e-08
                 T-EEEEE------HHHHHHTTSSEEE...EE-SB---HHHHHHHHHHTT-- CS
  PF01135.14  74 garvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle 124
                 g  vL++GsGsG    + a +vg++g v +++ ++e  ++ak+++    ++
  MMETSP1325-20131115|1827_1 105 GLDVLDLGSGSGRDCYLAAAMVGPNGSVTGVDMTQEQLDTAKEHVDDFTQA 155
                 668***************************************999876554 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.3e-06    0.0017       2     109 ..     106     213 ..     105     237 .. 0.72

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 1.3e-06
   PF13659.1   2 drvldpgcGsGtfllaalell..aalllgvEldpraaalaarnlar....agl.aervrvrqgdlrdla.ellragsfdlvvtnpPygpragaraalrdlydafleaaarllkpgG 109
                 + vld+g+GsG   + a++++  +  ++gv++  + ++ a++ ++     +g  ++++r+++g ++ l  +   ++s dl ++n      ++++       + +l+  ++ l++gG
  MMETSP1325-20131115|1827_1 106 LDVLDLGSGSGRDCYLAAAMVgpNGSVTGVDMTQEQLDTAKEHVDDftqaMGYpKPNLRFVKGMIEFLGdAGVEPNSIDLAISNCVIN-LSPNK-------EKVLQGVYDSLREGG 213
                 67**********8877777766*******************77665433333334458888888865531446788899988888754.22222.......334555555555555 PP

>> PF08123.8  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00014      0.19      47      98 ..     109     158 ..     105     197 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00014
                 EEE------HHHHHHHH----EEE.--B--HHHHHHHHHHHHHHHHHHHH--- CS
   PF08123.8  47 vDLGSGvGnvvlqaalevgcklsv.GvEimdnaselaekqkeelkkrlklfGk 98 
                 +DLGSG G+   +aa+ vg + sv Gv+++++  + a+++ + +++ +     
  MMETSP1325-20131115|1827_1 109 LDLGSGSGRDCYLAAAMVGPNGSVtGVDMTQEQLDTAKEHVDDFTQAMG---Y 158
                 7********9999999999887754**********99999888887764...4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.59u 0.51s 00:00:01.10 Elapsed: 00:00:00.62
# Mc/sec: 1518.98
//
Query:       MMETSP1325-20131115|1829_1  [L=560]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-23   81.5   0.0    7.6e-23   80.5   0.0    1.5  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.5   0.0   5.6e-27   7.6e-23      14     268 ..     108     398 ..      99     405 .. 0.81

  Alignments for each domain:
  == domain 1    score: 80.5 bits;  conditional E-value: 5.6e-27
  PF00248.16  14 isedealellraaleaGinlfDtAey.....................................Y..gkgqseellgealkksrkkreeviiatKvgrispiseglsrenieesleksLkrlgtdylDllllhrpdpslpsieevl.....ealeelkkeGkirhiGvSnfs.veilekakkkkkvkivvvqveynll................neleeegllelcaekgvgiiaysplggGlltgkylseerkedkeprkdaqdaleelselake..hgvslaqlalryalsrpavgsvipgassieqleenlkalel 268
                  s ++ + +++ a+e+Gin+f tA                                       +   +g+se  +g +lkk  ++re++i++tKv       +  ++e++++ +e+s +rl++d +Dl+ +h  +++ + ++ vl     e  +elk++G+i++iG+S +  +  + +a   ++  +  v ++y+++                + + +   +e+++ +g+gi  +sp+ +G    k l ++              ++  +++ak     ++ ++ a  ++ +rp+ +++ +ga+++ + + +++a++l
  MMETSP1325-20131115|1829_1 108 ASVEDLQTIVDSAMERGINHFETAADvlsftttappprhhhvtatitttttataatlthxssiHpdMRGRSESDYGVVLKK--HPRESYILQTKV------APLSDPEEFRAKMEASFERLQIDKIDLFAFHGLNNAAQ-LAMVLkggclEVAQELKAQGRIGAIGFSTHApTPLIVEA--IESGVFEYVNLHYHVIgsytstgtaadgvadaRYNGNLAAIEAAERRGMGIFIISPFDKGG---K-LFDAA------------PTPFSEAIAKAssSRLNAMHYAALWLWRRPGIHTISVGARTPTDFDNHIAAAQL 398
                 566788889***************99999999999999988888888877777777775555538889*************..************......99999*********************************.5555566556*******************9998888888..7888999*********999998888888853333333334444444799999999999873...2.22222............2344555555541556**********************************9954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.48s 00:00:01.21 Elapsed: 00:00:00.57
# Mc/sec: 2313.72
//
Query:       MMETSP1325-20131115|1832_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-06   26.1   0.9     0.0021   18.0   0.0    2.7  2  PF13415.1 Galactose oxidase, central domain
  ------ inclusion threshold ------
      0.066   12.8   2.0       0.93    9.2   0.1    2.8  2  PF13418.1 Galactose oxidase, central domain


Domain annotation for each model (and alignments):
>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.1e-07    0.0021      16      49 .]       3      36 ..       2      36 .. 0.94
   2 !    6.3   0.1    0.0015        10       3      13 ..      50      63 ..      48     112 .. 0.78

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 3.1e-07
   PF13415.1 16 trlndvyvldldtntweeigslPppRaghtatai 49
                + l d++ + l  ++w+++++lP p + ht+ta+
  MMETSP1325-20131115|1832_1  3 NVLKDTWLFELGFRQWTRLDDLPYPVCRHTLTAF 36
                6799***************************985 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0015
   PF13415.1  3 elyvfGGlgd...d 13
                +l+vfGG+++   +
  MMETSP1325-20131115|1832_1 50 DLVVFGGFDGaatS 63
                59*******75432 PP

>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00014      0.93      27      49 .]       4      26 ..       2      26 .. 0.92
   2 ?    2.6   0.1     0.016   1.1e+02      14      23 ..      50      59 ..      27      98 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00014
   PF13418.1 27 plnDlyvfDlstntWtrlpslPs 49
                +l+D+++f l  ++Wtrl++lP+
  MMETSP1325-20131115|1832_1  4 VLKDTWLFELGFRQWTRLDDLPY 26
                89*******************96 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.016
   PF13418.1 14 rlylfGGene 23
                 l++fGG ++
  MMETSP1325-20131115|1832_1 50 DLVVFGGFDG 59
                7999***887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 1269.56
//
Query:       MMETSP1325-20131115|1828_1  [L=713]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.088   12.7   0.0       0.15   11.9   0.0    1.4  1  PF04607.12 Region found in RelA / SpoT proteins


Domain annotation for each model (and alignments):
>> PF04607.12  Region found in RelA / SpoT proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.1e-05      0.15       3      94 ..     489     579 ..     487     595 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.1e-05
                 ---HHHHHHHHHH---CCCCCCC-S--E-EEEEESSTTHHHHHHHHHHT-.SSSEEEEEEEES---------EEEEEE------EEEEEEEEE CS
  PF04607.12   3 vKsiysiieKlrrkgkveekfeeitDligiRvivefkddcykvlelvkkl.wdpkpkrfkdyiaepkengYrslHtvveaekgeekvlvEiQi 94 
                 vKs ++++eK  ++     + +++ D++    ++++ ++ ++++e + +l  ++++ r+kd +++p+ +gYr + + ++  +  ++ +vE+Q+
  MMETSP1325-20131115|1828_1 489 VKSKDRVLEKTANDY--GGDVRQVVDVVRSSAVFHSLHELNNAVEALADLgGEIRVVRVKDRLNKPQGSGYRDVMLNLTVRSVADGLVVELQL 579
                 688888888887754..46899999**999999999********9999772577888*****************999988999999*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.03u 0.37s 00:00:01.40 Elapsed: 00:00:00.80
# Mc/sec: 2135.75
//
Query:       MMETSP1325-20131115|1833_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|1834_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-07   30.4   0.0    3.6e-07   30.2   0.0    1.0  1  PF00300.17 Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
      0.012   14.8   0.0      0.012   14.8   0.0    1.1  1  PF00328.17 Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   5.2e-11   3.6e-07      50      95 ..       7      54 ..       2      60 .. 0.83

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 5.2e-11
                EEEEESSHHHHHHHHHHCCCCE...EEEEE.GGGSHHHH----TTCHHH CS
  PF00300.17 50 avytSplkRaiqTaeilleeld...ipiiqeprLrerdfgeweglpkae 95
                 +y+S+++R+++Ta +++e+l+    ++i  p+Lrerdfg++ +l+  e
  MMETSP1325-20131115|1834_1  7 YIYASDFRRTRETAVGIMEGLElaeDRLILAPELRERDFGSL-NLRSHE 54
                69*****************888888899999********977.444444 PP

>> PF00328.17  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.8e-06     0.012      94     123 ..       5      34 ..       2      59 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.8e-06
                 TEEEEEESSHHHHHHHHCCCHHHCHHHH.. CS
  PF00328.17  94 dvkirssserRvlaSAqafaaGllgpegel 123
                 + +i++s+ rR++++A   ++Gl  +e  l
  MMETSP1325-20131115|1834_1   5 QTYIYASDFRRTRETAVGIMEGLELAEDRL 34 
                 579********************9777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|1836_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-05   25.0   0.1    2.7e-05   24.6   0.1    1.2  1  PF00702.21 haloacid dehalogenase-like hydrolase
     0.0019   18.3   0.0      0.002   18.2   0.0    1.1  1  PF12710.2  haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.094   12.7   0.0       0.18   11.8   0.0    1.5  1  PF03589.8  Antitermination protein


Domain annotation for each model (and alignments):
>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.1     6e-09   2.7e-05      72     153 ..      18      98 ..       2     142 .. 0.72

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 6e-09
                 EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGEBHHHHHHHHHHHHHTTC.EEEEESSCHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
  PF00702.21  72 avgnpewmtalglrviapdlvaaegqskgrtvvvlaqaralgviafadpvkpeaaeavasLkaagi.vvlltgdnpetaeaia 153
                 +v+ +ewm +  +   +  ++ +   +  +  ++++ + ++g  a++d++ +++ +++a+L++a + v++ltgd  eta +i 
  MMETSP1325-20131115|1836_1  18 KVEAEEWMSEWHAACSSTTERGQK-MDLAAAKIEFG-VTVVGCTAIEDRLQDDVPQTIADLRKAAVkVWVLTGDKMETAINIG 98 
                 338899999999986433333333.34444456677.99***************************************97765 PP

>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   4.4e-07     0.002      74     122 ..      16      97 ..       4     141 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 4.4e-07
                 HHHHHHH.......................................H--B.HHHHHHH......HTTEEEE-SS-HHHHHHH CS
   PF12710.2  74 lealake.ieea...............................klfegfi.pdaaellkelheaglrvvvlsgdprliakpv 122
                 l +++ e ++++                               +++e+ + +d++++++ l++a  +v+vl+gd +++a+ +
  MMETSP1325-20131115|1836_1  16 LSKVEAEeWMSEwhaacssttergqkmdlaaakiefgvtvvgcTAIEDRLqDDVPQTIADLRKAAVKVWVLTGDKMETAINI 97 
                 44445444444456666666667777777777888888888999999999************************55555444 PP

>> PF03589.8  Antitermination protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.9e-05      0.18       5      37 ..      29      60 ..      25      84 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.9e-05
   PF03589.8  5 sdscracagdgaalgrkqskaqlGvpvfkeCer 37
                 ++c++++ +g+ ++++ +k ++Gv v+  C  
  MMETSP1325-20131115|1836_1 29 HAACSSTTERGQKMDLAAAKIEFGVTVV-GCTA 60
                579************************9.8865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      411  (0.0300614); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.68
# Mc/sec: 539.18
//
Query:       MMETSP1325-20131115|1837_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.6   1.4       0.16   12.1   0.9    1.3  1  PF07363.6 Protein of unknown function (DUF1484)


Domain annotation for each model (and alignments):
>> PF07363.6  Protein of unknown function (DUF1484)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.9   1.2e-05      0.16      20      71 ..       9      62 ..       7      85 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.2e-05
   PF07363.6 20 qLaeqlakidkraktqlaatlrq..leavseliedtteeacaeLlrVSagLdgi 71
                +L +++++ +k+ + +  +t r+  l +v+++ e+++  aca+L rV ++L  +
  MMETSP1325-20131115|1837_1  9 KLLREITELNKANAGKNRSTKRRsvLATVAATAEEHVPLACAQLARVLIALGTV 62
                577777777887776666666554499********************9999655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       466  (0.0340843); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 371.85
//
Query:       MMETSP1325-20131115|1839_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.36s 00:00:00.63 Elapsed: 00:00:00.54
# Mc/sec: 137.57
//
Query:       MMETSP1325-20131115|1840_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        76  (0.00555881); expected 273.4 (0.02)
Passed bias filter:                       75  (0.00548566); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 257.72
//
Query:       MMETSP1325-20131115|1835_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-25   88.2   0.0    1.2e-24   87.1   0.0    1.5  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.1   0.0     9e-29   1.2e-24      15     152 ..      61     228 ..      48     231 .. 0.73

  Alignments for each domain:
  == domain 1    score: 87.1 bits;  conditional E-value: 9e-29
                 XXXXXX.---........-TTTTT--------TTT--------------........----S--TT--.....STT--..-..-.---S-TT.THHHH---HHHHHHHHTT------.---------...............-------.--.-----------STTT----TTTTT---- CS
  PF00504.16  15 fDplglskdp........tlkrlreaEliHGRvAMlavlGalvpelltk........lsaaskfaelpa....waeag..g..l.slptllalqillligflelareqelkapeseg.sekraypGg...............lgfdplg.la.kdeeekaelklkEiknGRlAMiaflgfv 152
                 +Dplg+++          t+ +lr+aE++HGRvAM+a+lG++++   t+        l               +a+    +    ++p ++ lqi++lig+le + e    ++++   ++k + pG                 +fdp+g l+ ++eeek++ +  Ei+nGR AM+++l+++
  MMETSP1325-20131115|1835_1  61 WDPLGVAEIDfwglgqdgTIGYLRHAEIKHGRVAMAAFLGYCAQC--TDlvkgehsiL----------PykgyVAD-VspQeqWdNIPLWGKLQIFTLIGMLESYGEGAGMDESEYVhYTKGGLPGFypsikgkgavtplplDLFDPFGiLKtQTEEEKERGRRVEINNGRGAMLGILAIL 228
                 555555532245555555*************************98..33222233321..........21233111.1121222239999**************9776655543333788888888789999999999999967****956699***********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.41s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1181.06
//
Query:       MMETSP1325-20131115|1841_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 670.00
//
Query:       MMETSP1325-20131115|1842_1  [L=540]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   56.7   0.0    3.8e-09   35.6   0.0    2.9  2  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   7.9e-08    0.0011      55     242 ..      22     185 ..      10     199 .. 0.74
   2 !   35.6   0.0   2.8e-13   3.8e-09     257     334 ..     238     319 ..     223     320 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 7.9e-08
                 HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-.TTTTC---HHHHHHHHHHHHHCCTTTHT.EEEEEEEEEEEEETTEEEETTSTTTTS-SS.BEEEECTTTCCEEECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE---- CS
  PF00225.18  55 qeevyeelakplvesvleGynvtifaYGqtgsGKTytmeGkeeeeekGiipraleelFeeieeekeeke.kefsvkvsylEiYnekiyDLLesekekkkkklkiredskkgkvyvkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGs 242
                 +  v +el++p+v++vl G   ++f  G+ +       +G        +    l+e+F +++++ +++   +    vs   +  e+++D   s      +kl++re++ +g  +v+gl+ ++v++++e++++ ++++++r+ +          SH i+t+t+++++ + +t      + +l+Lv L   
  MMETSP1325-20131115|1842_1  22 EFYVLQELGRPIVDRVLTGGDQCVFFAGTINDPACCGATGG-----DVLEAFLLREIFCTLAHDLQSTPpGSHMTAVSCCQVRGEHVTDACGSG---GCEKLRVRESAARG-SFVQGLRVTSVNDMHELMSITKRAHARRAPG----------SHLIITVTFRRSEDT-TT-----SVNTLQLVTLSSA 185
                 55677888888888888888888888887665555444452.....346667788888888887766642334556*************99987...4445*******988.*************************999876..........788888888776633.22.....3456777776655 PP

  == domain 2    score: 35.6 bits;  conditional E-value: 2.8e-13
                 HHHHHHHHHHHHHHHHHHHHHHT.......TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCT CS
  PF00225.18 257 kEaanINkSLlaLgrvIsaLaen......kkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakn 334
                  +++   kSL+ L rv++++++          +h+p+RdS LTrlL++ L+  +  ++++t+  ++   +et++++rfae +++
  MMETSP1325-20131115|1842_1 238 LDGEGTKKSLTSLLRVVTSITAAantnngLGGTHIPFRDSTLTRLLKKGLTEGQS-TLVATLRLDA-PRSETTRVVRFAEAMRK 319
                 56667789************9998888887889*****************97655.5789999865.789**********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       559  (0.0408865); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.90u 0.39s 00:00:01.29 Elapsed: 00:00:00.54
# Mc/sec: 2396.36
//
Query:       MMETSP1325-20131115|1831_1  [L=824]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-97  322.8   0.0    4.5e-48  162.6   0.0    3.1  3  PF00004.24 ATPase family associated with various cellular activities (AAA)
    1.8e-22   78.9   0.4    4.7e-22   77.6   0.3    1.8  1  PF02359.13 Cell division protein 48 (CDC48), N-terminal domain
    1.8e-14   53.2   0.0    9.3e-06   24.7   0.0    3.6  3  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    1.2e-12   47.9   0.3    0.00023   21.1   0.0    4.9  3  PF13401.1  AAA domain
      2e-12   47.0   0.0    4.8e-06   26.4   0.0    3.1  3  PF13671.1  AAA domain
    2.5e-12   46.1   0.0      5e-12   45.1   0.0    1.5  1  PF02933.12 Cell division protein 48 (CDC48), domain 2
    4.1e-12   46.8   0.0      1e-05   26.2   0.0    3.1  2  PF13207.1  AAA domain
    1.8e-11   44.1   0.0    8.1e-06   25.7   0.0    2.8  2  PF07724.9  AAA domain (Cdc48 subfamily)
    2.2e-11   43.5   0.1    8.1e-06   25.4   0.0    3.7  3  PF07728.9  AAA domain (dynein-related subfamily)
    4.9e-11   42.5   0.0    0.00039   20.1   0.0    3.5  3  PF13173.1  AAA domain
    2.1e-10   41.1   0.3     0.0016   18.7   0.0    3.8  3  PF13191.1  AAA ATPase domain
      1e-08   34.4   0.0     0.0011   17.9   0.0    2.8  2  PF06414.7  Zeta toxin
    4.5e-08   32.1   0.0    0.00052   18.7   0.0    2.5  2  PF06068.8  TIP49 C-terminus
    3.7e-07   29.9   1.2        1.5    8.3   0.0    4.5  4  PF01637.13 Archaeal ATPase
    7.9e-07   29.1   0.0      0.017   15.1   0.0    3.0  2  PF00910.17 RNA helicase
    9.2e-07   28.1   0.2      0.046   12.7   0.0    2.6  2  PF01078.16 Magnesium chelatase, subunit ChlI
    9.4e-07   29.0   0.0      0.011   15.8   0.0    2.8  2  PF13238.1  AAA domain
    1.2e-06   27.9   0.9      0.021   14.4   0.3    2.8  2  PF13245.1  Part of AAA domain
    1.7e-06   27.4   0.3      0.072   12.3   0.0    2.9  2  PF01695.12 IstB-like ATP binding protein
    3.9e-06   26.2   2.4        1.4    8.1   0.0    4.2  4  PF13481.1  AAA domain
      1e-05   25.3   0.0     0.0037   17.0   0.0    2.4  2  PF04851.10 Type III restriction enzyme, res subunit
    1.3e-05   25.0   0.1      0.018   14.8   0.0    3.0  3  PF13189.1  Cytidylate kinase-like family
    2.8e-05   24.0   0.0       0.35   10.6   0.0    2.6  2  PF13521.1  AAA domain
      3e-05   23.6   0.0      0.057   12.8   0.0    3.1  3  PF01443.13 Viral (Superfamily 1) RNA helicase
    5.2e-05   22.6   0.0       0.28   10.5   0.0    3.4  2  PF00158.21 Sigma-54 interaction domain
    5.5e-05   22.2   0.6        1.6    7.6   0.0    3.4  3  PF06745.8  KaiC
    6.7e-05   22.4   0.0       0.42   10.0   0.0    2.6  2  PF13479.1  AAA domain
    9.8e-05   21.2   0.0       0.29    9.8   0.0    2.3  2  PF00931.17 NB-ARC domain
     0.0001   21.8   0.0        1.6    8.2   0.0    3.7  4  PF05729.7  NACHT domain
    0.00013   21.5   0.0       0.33   10.4   0.0    3.1  3  PF00308.13 Bacterial dnaA  protein
    0.00018   20.6   0.4        1.7    7.7   0.0    3.4  3  PF02562.11 PhoH-like protein
    0.00019   20.3   0.0        0.3    9.8   0.0    2.2  2  PF01057.12 Parvovirus non-structural protein NS1
    0.00023   20.1   0.3       0.95    8.2   0.0    3.3  3  PF09848.4  Uncharacterized conserved protein (DUF2075)
    0.00089   18.7   0.0        1.3    8.5   0.0    2.6  2  PF07726.6  ATPase family associated with various cellular activities (AAA)
     0.0012   18.4   0.6        1.2    8.6   0.0    3.8  4  PF03266.10 NTPase
     0.0015   18.0   0.2        1.1    8.7   0.0    3.3  2  PF13604.1  AAA domain
     0.0016   17.2   0.0       0.87    8.3   0.0    3.0  3  PF05673.8  Protein of unknown function (DUF815)
     0.0041   16.8   0.0        3.7    7.3   0.0    2.7  2  PF01202.17 Shikimate kinase
     0.0053   16.5   0.0      0.019   14.7   0.0    2.0  1  PF09336.5  Vps4 C terminal oligomerisation domain
      0.006   15.6   0.0      0.013   14.5   0.0    1.5  1  PF03152.9  Ubiquitin fusion degradation protein UFD1
  ------ inclusion threshold ------
      0.021   13.9   0.1         13    4.8   0.0    3.5  3  PF12846.2  AAA-like domain
      0.024   14.1   0.1        4.9    6.6   0.0    2.6  2  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
      0.032   13.5   0.3        4.6    6.5   0.1    3.4  2  PF05707.7  Zonular occludens toxin (Zot)
      0.033   13.2   0.6        6.9    5.6   0.0    2.9  2  PF08433.5  Chromatin associated protein KTI12
      0.044   12.4   0.0        1.4    7.5   0.0    2.3  2  PF03215.10 Rad17 cell cycle checkpoint protein
       0.05   13.1   0.0        9.9    5.5   0.0    2.8  2  PF13086.1  AAA domain
      0.074   12.7   0.0       0.71    9.5   0.0    2.2  2  PF01568.16 Molydopterin dinucleotide binding domain
      0.082   12.3   0.0        5.7    6.4   0.0    2.6  2  PF13555.1  P-loop containing region of AAA domain
      0.095   12.9   0.0        9.1    6.4   0.0    2.6  2  PF13476.1  AAA domain
       0.12   11.2   0.1        5.5    5.7   0.0    2.9  3  PF07693.9  KAP family P-loop domain
       0.14   11.4   0.5         22    4.3   0.0    3.6  3  PF00270.24 DEAD/DEAH box helicase


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       4.8   1.3e+03      54      68 ..      84      99 ..      63     112 .. 0.79
   2 !  162.6   0.0   1.7e-50   4.5e-48       1     131 [.     262     391 ..     262     392 .. 0.98
   3 !  156.2   0.0   1.6e-48   4.3e-46       1     131 [.     535     667 ..     535     668 .. 0.97

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 4.8
                HHTS.-SEEEEEETGG CS
  PF00004.24 54 keka.kpsilfiDEid 68
                k+ + + +i+++DE+ 
  MMETSP1325-20131115|1831_1 84 KKGKqTVCIVLLDEAQ 99
                3344356*******75 PP

  == domain 2    score: 162.6 bits;  conditional E-value: 1.7e-50
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 vllyGppG GKTl+a+ava+e+g+ f+ i+g+e++sk+ gese+++r+ f+ea+++a psi+fiDEid++a++r++++ e+e+r+v+q+lt +dg+k++ ++v+vigatnrp+++d al+r gRfdr+i i+
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNA-PSIIFIDEIDSIAPKRDKTNGEVERRIVSQMLTLMDGLKSR-ANVVVIGATNRPNSIDAALRRfGRFDREIDIG 391
                 79******************************************************9.****************************************7.66***************************986 PP

  == domain 3    score: 156.2 bits;  conditional E-value: 1.6e-48
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 vl+yGppG+GKTl+akava+e++++f++++g+ell +++gese+++relf++a++ a p++lf+DE+d++a++r   sg+  + ++rv+nq+lte+dgv  k ++v+vigatnrpd +dpal+r gR+d+ ++i+
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRELFEKARSAA-PCVLFFDELDSIASARggsSGDGGGAADRVINQILTEIDGVGAK-KNVFVIGATNRPDIIDPALMRpGRLDQLVYIP 667
                 79******************************************************9.****************999899999*****************97.55*************************99997 PP

>> PF02359.13  Cell division protein 48 (CDC48), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.3   1.7e-24   4.7e-22       1      83 [.      47     126 ..      47     130 .. 0.95

  Alignments for each domain:
  == domain 1    score: 77.6 bits;  conditional E-value: 1.7e-24
  PF02359.13   1 rLrVaeapddedvgrgivrvspedmeelgleegdvveieg.krk.tvaivwparpedegkgiIrmdgvtRknagvsigdeVtvrk 83 
                 rL+V+ea +d   ++++v +s+++meel+l++gd+v+++g k k tv+iv+ ++ +d  +g I+m++v+Rkn++v++gd Vtv++
  MMETSP1325-20131115|1831_1  47 RLIVDEAASD---DNSVVSLSQKKMEELQLFRGDTVLLKGkKGKqTVCIVLLDEAQD--DGNIKMNKVVRKNLRVRLGDCVTVTS 126
                 79******99...***************************99999*********995..5***********************87 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   3.5e-08   9.3e-06      53     118 ..     262     335 ..     256     389 .. 0.70
   2 !   22.8   0.0   1.3e-07   3.4e-05      52      86 ..     534     568 ..     505     606 .. 0.82
   3 ?    0.5   0.0      0.87   2.3e+02     160     194 ..     681     717 ..     641     733 .. 0.79

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 3.5e-08
   PF05496.7  53 vllyGpPGlGkttlakiiakelgvelkvtsgPvl......ekagdlaalltnleek..dvlfideihrlsrave 118
                 vllyGpPG Gkt +a+ +a+e g+ +    gP +      e +++l   + + e++   ++fidei  ++++ +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGAFFFLINGPEImskmagESESNLRKAFEEAEKNapSIIFIDEIDSIAPKRD 335
                 9*******************************883322222344566556555544337*******99887655 PP

  == domain 2    score: 22.8 bits;  conditional E-value: 1.3e-07
   PF05496.7  52 hvllyGpPGlGkttlakiiakelgvelkvtsgPvl 86 
                  vl+yGpPG Gkt +ak +a+e ++++ +  gP l
  MMETSP1325-20131115|1831_1 534 GVLFYGPPGCGKTLMAKAVANECQANFISVKGPEL 568
                 69******************************987 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.87
   PF05496.7 160 glltsPlrd..rfgivarlefyeveelkeivkrsaki 194
                 +l  sP++d     i a+ + y+ ++l+ei +r+ak+
  MMETSP1325-20131115|1831_1 681 ALRKSPIKDvdLHYIAANTDKYTGADLTEICQRAAKL 717
                 5555666652145678889999***********9986 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1       4.4   1.2e+03      91     107 ..      48      71 ..      10     108 .. 0.56
   2 !   21.1   0.0   8.7e-07   0.00023       7     125 ..     262     368 ..     256     372 .. 0.72
   3 !   16.8   0.0   1.9e-05    0.0051       7      46 ..     535     566 ..     529     646 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 4.4
   PF13401.1  91 liiDEaqrL.......seealeel 107
                 li+DEa          s++ +eel
  MMETSP1325-20131115|1831_1  48 LIVDEAASDdnsvvslSQKKMEEL 71 
                 555555543222222213333333 PP

  == domain 2    score: 21.1 bits;  conditional E-value: 8.7e-07
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapastspkellqkllsalglpakgrltteellealqealrrrrtrlliiDEaqrL.....s......eealeelrslldd.etgvklvlvGtp 125
                 ++++G++G+GKT+ +r +a+          ++ ++f+ ++ +     +++k++++ ++          l++a++ea +++   ++ iDE++ +     +       + +++  +l+d  ++  ++v++G +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVAN----------ETGAFFFLINGPE----IMSKMAGESES---------NLRKAFEEAEKNAPS-IIFIDEIDSIapkrdKtngeveRRIVSQMLTLMDGlKSRANVVVIGAT 368
                 79******************..........5566666666666....44555555554.........455688888888888.999999999877655145556666677777777778888888888876 PP

  == domain 3    score: 16.8 bits;  conditional E-value: 1.9e-05
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveap 46 
                 ++++G++G+GKT+ ++ +a++         +a++++v  p
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANEC--------QANFISVKGP 566
                 789*****************98........4444444433 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.8e-08   4.8e-06       2      82 ..     262     372 ..     262     427 .. 0.69
   2 !   16.9   0.0   1.5e-05    0.0039       2      44 ..     535     579 ..     535     646 .. 0.82
   3 ?   -1.2   0.0       5.6   1.5e+03      25      78 ..     720     773 ..     708     789 .. 0.71

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 1.8e-08
   PF13671.1   2 vllvGlpGsGKstlaerllkklg..yvrlsqdtlrkrlfgtdqqskt............................dytrvlkrlyqilnklarkalsagrs.vivdatnlsr 82 
                 vll G+pGsGK+  a+++++++g  +++++ ++++++++g+   +++                               +v+ r+  +++ l  + l+++++ v++ atn+ +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGafFFLINGPEIMSKMAGESESNLRkafeeaeknapsiifideidsiapkrdkTNGEVERRIVSQMLTLM-DGLKSRANvVVIGATNRPN 372
                 7899*******************99999***********96555555667777888888999999988888885445557777777775666.5555555515556666543 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 1.5e-05
   PF13671.1   2 vllvGlpGsGKstlaerllkklg..yvrlsqdtlrkrlfgtdqqs 44 
                 vl+ G+pG+GK+  a++++++++  ++ +  ++l + +fg+   +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQanFISVKGPELLTMWFGESEAN 579
                 799********************7777788889999998854443 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 5.6
   PF13671.1  25 yvrlsqdtlrkrlfgtdqqsktdytrvlkrlyqilnklarkalsagrsvivdat 78 
                  + +s d +r rl++++++++    +  + + +i  k  ++a +a r  +  a 
  MMETSP1325-20131115|1831_1 720 RESISRDMERARLAAENPDDEMADVEEDDPVPYIGPKHFEEAVRASRRSVSEAS 773
                 566899999999999888887777777777888888888888887776665555 PP

>> PF02933.12  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.0   1.8e-14     5e-12       3      62 ..     149     211 ..     147     213 .. 0.95

  Alignments for each domain:
  == domain 1    score: 45.1 bits;  conditional E-value: 1.8e-14
                 -THHHH.HHHHHH--..-EE----EE-EE----EEEEEEEEEESS.SEE--TTSEEEE----X CS
  PF02933.12   3 dgdema.ylkrqFlg..rpvskGdiivfeflgkeiklvVvstePsgpvkitedTeielgekpv 62 
                  g++++ ylk +Fl   rpv+kGd++ ++  +++++++Vv+t+Ps  +++ +dT i+++ +p 
  MMETSP1325-20131115|1831_1 149 TGNLFDvYLKPYFLEayRPVQKGDLFLVRQAMHPVEFKVVETDPSPFCIVAPDTVIHCEGEPI 211
                 68999******************************************************9986 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   3.8e-08     1e-05       2     106 ..     262     403 ..     262     426 .. 0.61
   2 !   17.0   0.0   2.5e-05    0.0067       2      46 ..     535     580 ..     535     684 .. 0.79

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 3.8e-08
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG..B-......-GGGS-.B-----B--.SSGGGB-HHHHHHHH...............H..HHHHHH...............TTS---..--.------EEEEE----TT...GGTT CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd..ll......reeglk.elddgeres.kdadadllaaildglaa...........kkdtlswvidg...............alesel..dl.rleeadeiiyldaplpe...crkr 106
                 ++++GppGsGK+ +a+++a++ g   + ++   ++       e +l+  +++ e ++  ++ +d++++i+ + ++           +      ++dg                  + +  +l r+ + d+ i++  p+++   + +r
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGAFFFLINGpeIMskmageSESNLRkAFEEAEKNApSIIFIDEIDSIAPKRDKtngeverrivsQML---TLMDGlksranvvvigatnrP--NSIdaALrRFGRFDREIDIGVPDENgrlEIFR 403
                 789********************888888887677888888444444333322222236777888887766665555555556544222...444445555555555455431..22223444666777777777777652234444 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 2.5e-05
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG.B--GGGS-.B----- CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd.llreeglk.elddge 46 
                 ++++GppG+GK+  ak++a++   + +s +    +   +  e ++++
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANFISVKGpE-LLTMWFgESEANV 580
                 689*****************9988888887742.4444443333444 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0     3e-08   8.1e-06       6     105 ..     262     355 ..     257     362 .. 0.85
   2 !   15.3   0.0   4.7e-05     0.013       6     100 ..     535     626 ..     530     637 .. 0.70

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 3e-08
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--..-EEEETGGG----.------------HHHHHHHH-- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpk.essgadvSregVqrdLLqileg 105
                 +ll gp g+Gkt++a+a+a+   +     +  ++  e++     +   +++   +++  +ae++   i+++DEid i+pk ++ + +v r  ++  +L +++g
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGA----FFFLINGPEIMS----KMAGESESNLRKAFEEAEKNApsIIFIDEIDSIAPKrDKTNGEVERR-IVSQMLTLMDG 355
                 6899****************9996....99**********....88888888888888888888889*************77777777776.55567778876 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 4.7e-05
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG---..----THHHHHHHHHTTT-HHHHT---EEEETGGG----...------------HHHHH CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk...essgadvSregVqrdLL 100
                 +l+ gp g+Gkt++aka+a+  ++    ++i +   ell+    e+e  v +l  ++      +   ++++DE+d i++    +s       + V + +L
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQA----NFISVKGPELLTmwFGESEANVRELFEKAR----SAAPCVLFFDELDSIASArggSSGDGGGAADRVINQIL 626
                 799*******************96....999999999999454455555555555443....33455***********9775323333334445555555 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0     3e-08   8.1e-06       1     137 [.     261     380 ..     261     381 .. 0.79
   2 !   13.3   0.0   0.00017     0.045       1      34 [.     534     567 ..     534     607 .. 0.77
   3 ?   -2.0   0.0       8.7   2.3e+03     111     135 ..     634     654 ..     619     656 .. 0.76

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 3e-08
                 EEEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------.....G-SEEEEESGGG---HHHHHHHHHHHSSEEE..----EEE---.......-EEEEE-SS--.-TT-TTHHHHT CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar.....egeilvlDEveraesevlnsLlslleerrlllpeggelvkaknddlleknfrviatanpldrslnelspalrs 137
                 +vlL GppG+gK+ +a+ +a  +++ ++ +++++ +++     + ++             +a++      ++i+++DE++ + ++  ++ +   e+r ++  ++ +l++  +    + n+ vi+++n+++    ++++alr+
  MMETSP1325-20131115|1831_1 261 GVLLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKMAGESESNL------------RKAFEeaeknAPSIIFIDEIDSIAPKR-DKTNGEVERRIVS--QMLTLMDGLKS---RANVVVIGATNRPN----SIDAALRR 380
                 59********************************9987554444444............333333336789*********999874.6777888888888..77777766653...468********999....99999986 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 0.00017
                 EEEEE------HHHHHHHGGGGBS--EEEEE--T CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltr 34 
                 +vl  GppG+gK+ +a+ +a   ++++  v +++
  MMETSP1325-20131115|1831_1 534 GVLFYGPPGCGKTLMAKAVANECQANFISVKGPE 567
                 5899****************99988888777765 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 8.7
                 ....-EEEEE-SS--.-TT-TTHHH CS
   PF07728.9 111 leknfrviatanpldrslnelspal 135
                 ++kn+ vi+++n++d     ++pal
  MMETSP1325-20131115|1831_1 634 AKKNVFVIGATNRPD----IIDPAL 654
                 466899*******99....666665 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.75     2e+02      35      75 ..      61     103 ..      46     126 .. 0.62
   2 !   20.1   0.0   1.5e-06   0.00039       5      77 ..     262     346 ..     259     388 .. 0.69
   3 !   15.9   0.0   3.1e-05    0.0082       5      74 ..     535     604 ..     531     668 .. 0.69

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.75
   PF13173.1  35 inlddeelrkladpellelfleklkekkky..lflDEiqevpe 75 
                 ++l +++ ++l+ ++ ++++l+ +k+k+++  ++lDE+q   +
  MMETSP1325-20131115|1831_1  61 VSLSQKKMEELQLFRGDTVLLKGKKGKQTVciVLLDEAQDDGN 103
                 444444444444443345666654444444469******8654 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 1.5e-06
   PF13173.1   5 lvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe..llelfleklkekkkylflDEiqev............pewe 77 
                 ++++Gp ++GKt +++ +a+e      ++ in  +   + + ++e  l ++f e +k+  +++f+DEi  +            +++ 
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETG--AFFFLINGPEIMSKMAGESEsnLRKAFEEAEKNAPSIIFIDEIDSIapkrdktngeveRRIV 346
                 789****************9988..777777777765544334445466888887777899*******9995555555555553344 PP

  == domain 3    score: 15.9 bits;  conditional E-value: 3.1e-05
   PF13173.1   5 lvitGpRrvGKttllkqlakellkeesilyinlddeelrkla..dpe.llelflek.lkekkkylflDEiqevp 74 
                 ++ +Gp ++GKt ++k +a+e        +i+++ +el+++   ++e + ++++ek  +    +lf+DE   + 
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQ----ANFISVKGPELLTMWfgESEaNVRELFEKaRSAAPCVLFFDELDSIA 604
                 7889***********99996655....5555555555544331133344455555524557788*****99883 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   6.1e-06    0.0016      20      44 ..     257     280 ..     230     287 .. 0.80
   2 ?   -1.1   0.0       7.1   1.9e+03     112     141 ..     302     328 ..     281     365 .. 0.77
   3 !   17.0   0.0   1.9e-05    0.0051      24      57 ..     531     561 ..     524     630 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 6.1e-06
   PF13191.1  20 segsplllvtGpsGiGKSsLlrela 44 
                  +++  +l++Gp+G+GK+ ++r++a
  MMETSP1325-20131115|1831_1 257 KPPR-GVLLYGPPGSGKTLIARAVA 280
                 4444.9*****************54 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 7.1
   PF13191.1 112 iglqalvalldaalartrrpklvlvlDDlq 141
                 +++++l ++ ++a+++++    ++++D+++
  MMETSP1325-20131115|1831_1 302 ESESNLRKAFEEAEKNAP---SIIFIDEID 328
                 667788888888888888...899999854 PP

  == domain 3    score: 17.0 bits;  conditional E-value: 1.9e-05
   PF13191.1  24 p..lllvtGpsGiGKSsLlrelakpillerlrfaag 57 
                 p   +l++Gp+G+GK+ ++++     ++++++    
  MMETSP1325-20131115|1831_1 531 PskGVLFYGPPGCGKTLMAKA-----VANECQANFI 561
                 2348*****************.....6665555444 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   4.3e-06    0.0011      15     123 ..     258     388 ..     250     425 .. 0.78
   2 !   13.3   0.0   0.00011      0.03      19      55 ..     535     570 ..     529     591 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 4.3e-06
   PF06414.7  15 kpkavllgGqpGAGKtslaellleelaagnivridaDelrkyh.........................payrelekkdpkeaseltqkdaselveklidralekgyniilegtlrspdkarkiarklkkagykv 123
                  p+ vll G+pG+GKt +a+++ +e+ +  +  i++ e++++                           +++++  k++k++ e+ ++ +s++    +   l+ + n+++ g+   p+ ++   r++ + ++++
  MMETSP1325-20131115|1831_1 258 PPRGVLLYGPPGSGKTLIARAVANET-GAFFFLINGPEIMSKMagesesnlrkafeeaeknapsiifiDEIDSIAPKRDKTNGEVERRIVSQMLT--LMDGLKSRANVVVIGATNRPNSIDAALRRFGRFDREI 388
                 6999*********************9.9999*********9998888888887777777777777777777777777777777777777776653..4556777777777777777777777777666655555 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 0.00011
   PF06414.7  19 vllgGqpGAGKtslaellleelaagnivridaDelrk 55 
                 vl  G+pG+GKt +a+++ +e  + n++ +++ el +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANEC-QANFISVKGPELLT 570
                 7778******************.*******9998855 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.9e-06   0.00052      51     108 ..     260     312 ..     253     362 .. 0.78
   2 !   10.6   0.0   0.00054      0.14      50      98 ..     532     578 ..     525     589 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1.9e-06
   PF06068.8  51 ravLlaGppgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqalRksig 108
                 r+vLl Gppg+Gkt +a a+++e g    f  ++g e+ s     +e    +lRk+  
  MMETSP1325-20131115|1831_1 260 RGVLLYGPPGSGKTLIARAVANETG--AFFFLINGPEIMSKMAGESES---NLRKAFE 312
                 89*********************99..78999*******998888774...5555554 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00054
   PF06068.8  50 GravLlaGppgtGktalaiaiskelgedvpfvalsgsevyslevkktev 98 
                  ++vL+ Gppg Gkt +a a+++e      f++++g e+ ++    +e+
  MMETSP1325-20131115|1831_1 532 SKGVLFYGPPGCGKTLMAKAVANECQ--ANFISVKGPELLTMWFGESEA 578
                 589*********************87..679999999988776666665 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1      0.29        77     114     136 ..      83     108 ..      15     116 .. 0.67
   2 !    7.9   0.0    0.0071       1.9      21      44 ..     260     283 ..     250     303 .. 0.83
   3 ?    6.4   0.0     0.021       5.7      91     202 ..     292     404 ..     279     430 .. 0.70
   4 !    8.3   0.0    0.0057       1.5      23      45 ..     535     557 ..     525     641 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.29
                 HH----..EEEEEETGGGGG.----- CS
  PF01637.13 114 kkkgkk..iiiiiDElqkli.lglng 136
                  kkgk+  +i+++DE+q  + +++n+
  MMETSP1325-20131115|1831_1  83 GKKGKQtvCIVLLDEAQDDGnIKMNK 108
                 34555578*********998777663 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0071
                 SEEEEE--TT---HHHHHHHHHH- CS
  PF01637.13  21 siiviyGprrsGKTaLlkeileel 44 
                 + +++yGp +sGKT + + +++e+
  MMETSP1325-20131115|1831_1 260 RGVLLYGPPGSGKTLIARAVANET 283
                 5689**********9999999987 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.021
                 .-----TS-GG.G--HHHHHHHHHH----EEEEEETGGGGG----.....---HHHHHHHHHHHH...-TTEEEEE-------HHHTT-TTSTT------.EE-----HHHHHHHHH- CS
  PF01637.13  91 leeilkkksklvflaleellealkkkgkkiiiiiDElqklilgln.....gakslvkeLlnlidsltkekhlcvvlclSseglfielvyskaplegRhky.ilvkdfdketalnflre 202
                 + ei++k     +++l++++e+ +k +   ii iDE+  +  + +      ++++v+++l l+d  +k+   +vv+ ++    +i+       ++gR +  i++   d++  l+++r 
  MMETSP1325-20131115|1831_1 292 GPEIMSKMAGESESNLRKAFEEAEKNAP-SIIFIDEIDSIAPKRDktngeVERRIVSQMLTLMDG-LKSRANVVVIGATNRPNSID---AALRRFGRFDReIDIGVPDENGRLEIFRI 404
                 5566666666678888888888888775.899*******993333677777899***********.77777888888888777777...55566677666666666655555555555 PP

  == domain 4    score: 8.3 bits;  conditional E-value: 0.0057
                 EEEE--TT---HHHHHHHHHH-. CS
  PF01637.13  23 iviyGprrsGKTaLlkeileelk 45 
                 ++ yGp ++GKT + k +++e +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQ 557
                 688*********99999999874 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0    0.0017      0.46       1      26 [.     262     287 ..     262     311 .. 0.78
   2 !   15.1   0.0   6.5e-05     0.017       1      26 [.     535     560 ..     535     587 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0017
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkkl 26 
                 ++lyGp+g GK+++a+ +a++    +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGAFF 287
                 689**************998876655 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 6.5e-05
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkkl 26 
                 +++yGp+g+GK+++ak +a++ + ++
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANF 560
                 689**************999987655 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   0.00022     0.059      25      42 ..     262     279 ..     258     283 .. 0.90
   2 !   12.7   0.0   0.00017     0.046      24      42 ..     534     552 ..     527     557 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00022
  PF01078.16  25 lllvGppGsGKtmlakrl 42 
                 +ll+GppGsGKt++a+++
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAV 279
                 79*************987 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 0.00017
  PF01078.16  24 nlllvGppGsGKtmlakrl 42 
                  +l++GppG+GKt++ak++
  MMETSP1325-20131115|1831_1 534 GVLFYGPPGCGKTLMAKAV 552
                 589*************987 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.3e-05     0.011       1      23 [.     262     311 ..     262     372 .. 0.64
   2 !   10.2   0.0    0.0024      0.64       1      23 [.     535     562 ..     535     591 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4.3e-05
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl...........................g 23 
                 +l+ G+pG+GKt +a++ a+++                            
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETgaffflingpeimskmagesesnlrkaF 311
                 6899***************9976666666664444444444433333332 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.0024
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl.....g 23 
                 +l+ G+pG+GKt  ak+ a+++     +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECqanfiS 562
                 6789**************9997443330 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.3   7.7e-05     0.021      10      32 ..     260     280 ..     252     285 .. 0.78
   2 !   10.7   0.0    0.0012      0.31      16      34 ..     538     556 ..     528     569 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 7.7e-05
   PF13245.1  10 npllvvtGgPGtGKTttlaaiia 32 
                 ++ +++ G+PG+GKT ++a+++a
  MMETSP1325-20131115|1831_1 260 RG-VLLYGPPGSGKT-LIARAVA 280
                 44.455*********.8888887 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.0012
   PF13245.1  16 tGgPGtGKTttlaaiiaal 34 
                  G+PG GKT  + a+++++
  MMETSP1325-20131115|1831_1 538 YGPPGCGKTLMAKAVANEC 556
                 6********6666666655 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00039       0.1      49      70 ..     261     282 ..     255     339 .. 0.80
   2 !   12.3   0.0   0.00027     0.072      48      71 ..     533     556 ..     528     565 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00039
  PF01695.12  49 nlvllGpsGvGKthlAialgve 70 
                  ++l Gp+G GKt +A a++ e
  MMETSP1325-20131115|1831_1 261 GVLLYGPPGSGKTLIARAVANE 282
                 799**************99865 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.00027
  PF01695.12  48 enlvllGpsGvGKthlAialgvea 71 
                 + +++ Gp+G GKt +A a++ e 
  MMETSP1325-20131115|1831_1 533 KGVLFYGPPGCGKTLMAKAVANEC 556
                 7899***************99875 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1     0.014       3.7      36      52 ..     262     278 ..     249     287 .. 0.84
   2 ?    7.0   0.0     0.011         3     129     186 ..     306     365 ..     285     373 .. 0.73
   3 !    8.1   0.0    0.0054       1.4      30      54 ..     530     553 ..     505     559 .. 0.80
   4 ?   -0.0   0.0       1.6   4.3e+02     128     171 ..     578     624 ..     559     641 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.014
   PF13481.1  36 tllaGapgtGKStlalq 52 
                 +ll+G+pg+GK+ +a +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARA 278
                 79**********99855 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.011
   PF13481.1 129 dlerllaaieelegpdlvviDtlsrlvggdensnsdv.gaviaalerlakrtg..aavllv 186
                  l++  +++e+ + p+++ iD ++++++  ++ n +v +++++++  l + ++  a v+++
  MMETSP1325-20131115|1831_1 306 NLRKAFEEAEK-NAPSIIFIDEIDSIAPKRDKTNGEVeRRIVSQMLTLMDGLKsrANVVVI 365
                 34455556666.55***************99999998899999887776644332555555 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.0054
   PF13481.1  30 lprgsltllaGapgtGKStlalqla 54 
                  p ++ +l++G+pg+GK+ +a + a
  MMETSP1325-20131115|1831_1 530 SPSKG-VLFYGPPGCGKTLMAKAVA 553
                 44443.89***********998766 PP

  == domain 4    score: -0.0 bits;  conditional E-value: 1.6
   PF13481.1 128 adlerllaaieelegpdlvviDtlsrlvgg..densnsd...v.gaviaa 171
                 a +++l + +++   p ++ +D l++++++  +  s+ d   + ++vi++
  MMETSP1325-20131115|1831_1 578 ANVRELFEKARS-AAPCVLFFDELDSIASArgG--SSGDgggAaDRVINQ 624
                 456778888888.56999999999998887542..332212323666665 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.4e-05    0.0037      24      99 ..     258     329 ..     230     365 .. 0.66
   2 ?    5.8   0.0     0.036       9.6      25      54 ..     532     561 ..     505     588 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.4e-05
  PF04851.10  24 ekkrglivmaTGtGKTlvaasliarlarkflflvprkelleqaleefkkfeskkiefekkniavakkdklfgeeqk 99 
                   + +l+  + G+GKTl+a + +a+    f+fl+++ e+++++  e +    k +e+++kn +       ++e+ +
  MMETSP1325-20131115|1831_1 258 PPRGVLLYGPPGSGKTLIARA-VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAP---SIIFIDEIDS 329
                 5667889999**********6.999999****************9994444444444444443...2222222333 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.036
  PF04851.10  25 kkrglivmaTGtGKTlvaasliarlarkfl 54 
                  k +l+  + G+GKTl+a +++ ++  +f+
  MMETSP1325-20131115|1831_1 532 SKGVLFYGPPGCGKTLMAKAVANECQANFI 561
                 67889999**********998888877887 PP

>> PF13189.1  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       4.3   1.2e+03      73     116 ..      74     139 ..      25     141 .. 0.60
   2 !   14.8   0.0   6.6e-05     0.018       8     102 ..     268     366 ..     262     369 .. 0.72
   3 ?    6.2   0.0      0.03         8       8      56 ..     541     589 ..     537     640 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 4.3
   PF13189.1  73 k.....................dlslddklfkaqsevirel.aekescVivGrcadyilrdrpnvl 116
                                       d+++dd   k+++ v ++l ++ ++cV v  ++d+ + +r +vl
  MMETSP1325-20131115|1831_1  74 FrgdtvllkgkkgkqtvcivllDEAQDDGNIKMNKVVRKNLrVRLGDCVTVTSHGDVPYGKRVHVL 139
                 122222222333344466677777888888888776666665567799999999998877777665 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 6.6e-05
   PF13189.1   8 yGSgGreigekLaeklgipy..ydk.eileeaakesgiseeev.ekydekassesllksavkgsvagsfkdlslddklfkaqsevirelaekescVivG 102
                  GSg++ i++++a++ g  +  ++  ei+ ++a es+ +  ++ e+++++a+s  ++ ++++ + +   ++ + ++++++ +  ++  l  + ++V++G
  MMETSP1325-20131115|1831_1 268 PGSGKTLIARAVANETGAFFflINGpEIMSKMAGESESNLRKAfEEAEKNAPSIIFIDEIDSIAPKRDKTNGEVERRIVSQMLTLMDGLKSRANVVVIG 366
                 7****************9993334457777777776666554436666666644445555555555555588889999988888999998899999998 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.03
   PF13189.1   8 yGSgGreigekLaeklgipyydkeileeaakesgiseeevekydekass 56 
                  G+g++  ++++a++ + ++++ +  e +   +g se+ v++  eka s
  MMETSP1325-20131115|1831_1 541 PGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRELFEKARS 589
                 6**********************99999999999999999988888875 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0    0.0013      0.35       2      42 ..     262     307 ..     261     327 .. 0.69
   2 !   10.6   0.0    0.0013      0.36       2      36 ..     535     574 ..     534     598 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.0013
   PF13521.1   2 ivitGgpstGKTtlleaLaar.gypvv....pEvarevleeklakg 42 
                 + + G+p++GKT +++a+a++ g   +    pE++ ++  e   + 
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANEtGAFFFlingPEIMSKMAGESESNL 307
                 6799***************765544332256666666655554444 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0013
   PF13521.1   2 ivitGgpstGKTtlleaLaar...gypvv..pEvarevle 36 
                 + + G+p++GKT  ++a+a++   ++  v  pE  ++++ 
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANEcqaNFISVkgPELLTMWFG 574
                 6799***************766554444447777666655 PP

>> PF01443.13  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.97   2.6e+02      40      77 ..      27      63 ..       9      79 .. 0.68
   2 ?    5.7   0.0     0.033       8.7       5      67 ..     266     327 ..     262     332 .. 0.69
   3 !   12.8   0.0   0.00021     0.057       5      66 ..     539     599 ..     535     604 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.97
  PF01443.13 40 pnlsvrtvdsflmalvkskgkililDEylllhaGyill 77
                ++++ + + ++ m +++s  ++li+DE+ + +  ++ l
  MMETSP1325-20131115|1831_1 27 EDDKPKDLSTAIMDKKRS-PNRLIVDEAASDDNSVVSL 63
                455555667777777666.89*******9988776666 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.033
  PF01443.13   5 GvpGcGKStlirkllrt.....ltvnrptaelrtegkpklpnlsvrtvdsflmalvkskgkililDEy 67 
                 G pG+GK+ + r ++++     +  n p  e+ ++ + +++++  + ++++++++      i+++DE+
  MMETSP1325-20131115|1831_1 266 GPPGSGKTLIARAVANEtgaffFLINGP--EIMSKMAGESESNLRKAFEEAEKNA----PSIIFIDEI 327
                 88**************988875333333..5555555555555555566666655....469999997 PP

  == domain 3    score: 12.8 bits;  conditional E-value: 0.00021
  PF01443.13   5 GvpGcGKStlirkllrt....ltvnrptaelrtegkpklpnlsvrtvdsflmalvkskgkililDE 66 
                 G pGcGK+ + + ++++    + +++   el+t+++ +++++  + ++++ +a+ +    +l++DE
  MMETSP1325-20131115|1831_1 539 GPPGCGKTLMAKAVANEcqanFISVKG-PELLTMWFGESEANVRELFEKARSAAPC----VLFFDE 599
                 78******************9555555.7*******99999988888888888776....799999 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0     0.001      0.28      23     108 ..     260     333 ..     249     385 .. 0.61
   2 !    7.5   0.0    0.0088       2.4      23      51 ..     533     558 ..     519     604 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.001
                 S-EEEE-------HHHHHHHHHTSTTTTS--EEEETTTS-HHHH.HHHH------------S-----TTTG----EEEET-----HH CS
  PF00158.21  23 ltvlitGesGtGKellAraiheaskrkkkpfvavncaaipeeLl.eseLFGhekGaFtGAekekkGlfekadgGtLfLDeigelple 108
                   vl+ G  G+GK+l+Ara+ +++    + f  +n  +i +++  ese     + aF  Ae        k   +++f+Dei ++ ++
  MMETSP1325-20131115|1831_1 260 RGVLLYGPPGSGKTLIARAVANET---GAFFFLINGPEIMSKMAgESE--SNLRKAFEEAE--------KNAPSIIFIDEIDSIAPK 333
                 569****************97654...467777777666544431222..23334444443........344567777777777665 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0088
                 S-EEEE-------HHHHHHHHHTSTTTTS CS
  PF00158.21  23 ltvlitGesGtGKellAraiheaskrkkk 51 
                   vl  G  G+GK+l+A+a+ ++ +   +
  MMETSP1325-20131115|1831_1 533 KGVLFYGPPGCGKTLMAKAVANECQ---A 558
                 569****************988765...3 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.017       4.5      18      37 ..     258     277 ..     249     283 .. 0.83
   2 ?    4.6   0.0      0.05        13     105     151 ..     305     358 ..     282     377 .. 0.71
   3 !    7.6   0.0    0.0059       1.6      15      38 ..     528     551 ..     519     565 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.017
   PF06745.8  18 egrvvlitGepGtGKtifal 37 
                   r vl++G pG+GKt++a 
  MMETSP1325-20131115|1831_1 258 PPRGVLLYGPPGSGKTLIAR 277
                 56779************985 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.05
   PF06745.8 105 eklaeaikeika...krvviDsitgl....yeekeavaReilrqlvrvlkklgv 151
                 ++l++a +e +    + + iD i+++     +++ +v R+i+ q+++ + +l+ 
  MMETSP1325-20131115|1831_1 305 SNLRKAFEEAEKnapSIIFIDEIDSIapkrDKTNGEVERRIVSQMLTLMDGLKS 358
                 45555555444333477888888888775666667789*********9988765 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0059
   PF06745.8  15 GipegrvvlitGepGtGKtifalq 38 
                 G+   + vl +G pG+GKt++a+ 
  MMETSP1325-20131115|1831_1 528 GMSPSKGVLFYGPPGCGKTLMAKA 551
                 6666778999***********975 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0016      0.42       6      23 ..     262     279 ..     259     331 .. 0.78
   2 !    9.7   0.0     0.002      0.53       6      23 ..     535     552 ..     532     583 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0016
   PF13479.1   6 vliYGkpGiGKTslaktl 23 
                 vl+YG+pG+GKT  a+ +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAV 279
                 79**********998876 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.002
   PF13479.1   6 vliYGkpGiGKTslaktl 23 
                 vl YG+pG GKT +ak +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAV 552
                 789***********9976 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0     0.002      0.54      22      42 ..     262     282 ..     250     287 .. 0.89
   2 !    9.8   0.0    0.0011      0.29      22      43 ..     535     556 ..     525     572 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.002
                 EEEE-------HHHHHHHTS- CS
  PF00931.17  22 vglvGmgGvGKttlakqvykd 42 
                 v l+G +G+GKt +a++v ++
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANE 282
                 789***************997 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0011
                 EEEE-------HHHHHHHTS-S CS
  PF00931.17  22 vglvGmgGvGKttlakqvykde 43 
                 v ++G +G+GKt +ak+v ++ 
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANEC 556
                 779***************9983 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0058       1.6       3      23 ..     262     282 ..     260     285 .. 0.89
   2 ?   -1.6   0.0       5.8   1.6e+03      67     111 ..     305     350 ..     295     383 .. 0.58
   3 !    7.9   0.0    0.0073         2       3      25 ..     535     557 ..     533     564 .. 0.88
   4 ?    0.2   0.0       1.7   4.6e+02      58      98 ..     569     608 ..     566     629 .. 0.67

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0058
   PF05729.7   3 vilqGeaGsGKTtLlqklasa 23 
                 v+l G++GsGKT  ++ +a++
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANE 282
                 899************999876 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 5.8
   PF05729.7  67 apvsevwivllelperlLlilDglDelvsdlgq..lkekqpvrtlLs 111
                 ++ ++++ +  ++++++ +++D +D ++ + ++   + ++++   + 
  MMETSP1325-20131115|1831_1 305 SNLRKAFEEAEKNAPSI-IFIDEIDSIAPKRDKtnGEVERRIVSQML 350
                 55555555555555555.55799999988777644222333333344 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.0073
   PF05729.7   3 vilqGeaGsGKTtLlqklasawa 25 
                 v+  G++G+GKT +++ +a++ +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQ 557
                 6789*************999865 PP

  == domain 4    score: 0.2 bits;  conditional E-value: 1.7
   PF05729.7  58 LfsqlpepaapvsevwivllelperlL...lilDglDelvsdlg 98 
                 L+  + e++a+v+e    l e ++++    l++D lD ++s  g
  MMETSP1325-20131115|1831_1 569 LTMWFGESEANVRE----LFEKARSAApcvLFFDELDSIASARG 608
                 55556678888888....4444444444449*******998766 PP

>> PF00308.13  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0    0.0012      0.33      37     186 ..     262     415 ..     257     435 .. 0.74
   2 ?    6.9   0.0     0.015         4      37      64 ..     535     562 ..     527     573 .. 0.90
   3 ?   -0.9   0.0       3.4   9.2e+02     162     197 ..     665     698 ..     661     717 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0012
                 EEEE-------HHHHHH---HHHHHSSSS-EEEEEHHHHHHHHHHHHH---HHHHHHHHTT-.SEEEEE-GGGG---.---H........HHHHHHHHHHHT---EEEEE-SS-TTT-SS--HHHHHHHH---EEE-----HHHHHHHHHHHHHHH---..- CS
  PF00308.13  37 lfiygevGlGKtHLLqaignevlenapnarvvYltaeeFlkelvdalrdkkiekfkkeyrkv.DllliDDiqflakk.ektq........eelfhifnalleenkqivlssDraPkeleeledrlrsrfeaGlvveiekpdletrlailekkleeenle..i 186
                 +++yg  G GKt + +a++ne+ +         +++ e ++++    +++  ++f +  +++  ++ iD+i  +a k +kt+         +++++++ l  +++ +v+ +   P+++     r+  rf+    ++i  pd + rl+i + + ++ +l+  +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGAF-----FFLINGPEIMSKMAGESESNLRKAFEEAEKNApSIIFIDEIDSIAPKrDKTNgeverrivSQMLTLMDGLKSRANVVVIGATNRPNSIDAALRRF-GRFDR--EIDIGVPDENGRLEIFRIHTRNMKLDedV 415
                 799***********99999987655.....57899********************998886627889******99762455411111111456777778888899999*******9887665554.67877..57778899999999997655544443333 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.015
                 EEEE-------HHHHHH---HHHHHSSS CS
  PF00308.13  37 lfiygevGlGKtHLLqaignevlenapn 64 
                 +++yg  G GKt + +a++ne ++n+ +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANFIS 562
                 799******************9998765 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 3.4
                 E-----HHHHHHHHHHHHHHH-----TTHHHHHHHH CS
  PF00308.13 162 eiekpdletrlailekkleeenleipeevlefiaqr 197
                  i  pdle+rl+il+  l+++ ++  +  l++ia +
  MMETSP1325-20131115|1831_1 665 YIPMPDLESRLSILKAALRKSPIK--DVDLHYIAAN 698
                 57789*********9988766544..4445555555 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.33        88     121     140 ..      91     110 ..      65     135 .. 0.71
   2 ?    6.7   0.0     0.013       3.4      22      40 ..     262     280 ..     256     285 .. 0.88
   3 !    7.7   0.0    0.0063       1.7      22      42 ..     535     555 ..     527     563 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.33
  PF02562.11 121 afvilDEaqnttkeqmkmfl 140
                 ++v+lDEaq+  + +m+ ++
  MMETSP1325-20131115|1831_1  91 CIVLLDEAQDDGNIKMNKVV 110
                 799******87777766554 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.013
  PF02562.11  22 vfaiGpaGtGKTylavala 40 
                 v++ Gp G+GKT++a a+a
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVA 280
                 6789***********9998 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0063
  PF02562.11  22 vfaiGpaGtGKTylavalave 42 
                 v+  Gp G+GKT++a a+a e
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANE 555
                 7789***********999966 PP

>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0036      0.96     117     140 ..     262     285 ..     253     291 .. 0.87
   2 !    9.8   0.0    0.0011       0.3     117     138 ..     535     556 ..     529     561 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0036
  PF01057.12 117 vwfyGpantGktnlaeaIakavpl 140
                 v++yGp+  Gkt +a+a a+ +  
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGA 285
                 899***************997665 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0011
  PF01057.12 117 vwfyGpantGktnlaeaIakav 138
                 v+fyGp+ +Gkt +a+a a+ +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANEC 556
                 89****************9865 PP

>> PF09848.4  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1      0.12        31      35      93 ..      38      99 ..      19     108 .. 0.72
   2 !    8.2   0.0    0.0035      0.95       4      26 ..     262     290 ..     259     365 .. 0.69
   3 ?    4.9   0.0     0.036       9.6       5      43 ..     536     567 ..     532     590 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.12
   PF09848.4 35 vflsgNhplvkvlrealakkl.ekkkkkeavkkpssfinnls..kaekkkpkedvvivDEAh 93
                ++  +  p + ++ ea + ++   +  ++++++++ f  +    k +k k+++ +v++DEA+
  MMETSP1325-20131115|1831_1 38 IMDKKRSPNRLIVDEAASDDNsVVSLSQKKMEELQLFRGDTVllKGKKGKQTVCIVLLDEAQ 99
                33344455666666766666666677778888888888777788899999***********9 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0035
   PF09848.4   4 ilvtGvaGtGKtvvalnllael......e 26 
                 +l  G +G+GKt++a ++++e        
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETgaffflI 290
                 6778*************999984444441 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.036
   PF09848.4   5 lvtGvaGtGKtvvalnllaeledseeertavflsgNhpl 43 
                 l  G +G GKt++a ++++e+       +a+f+s+ +p+
  MMETSP1325-20131115|1831_1 536 LFYGPPGCGKTLMAKAVANEC-------QANFISVKGPE 567
                 6689***************99.......55555555555 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0094       2.5       2      44 ..     262     302 ..     261     372 .. 0.72
   2 !    8.5   0.0    0.0049       1.3       2      30 ..     535     563 ..     534     571 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0094
   PF07726.6   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGt 44 
                 vll g PG +ktl+++a+a+  ++ f  i   p+++ s + G 
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGAFFFLIN-GPEIM-SKMAGE 302
                 7999****************9988776654.45555.345555 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0049
   PF07726.6   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vl+ g PG +ktl++ka+a+  +++f  +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANFISV 563
                 788999****************9999766 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.21        56       2      22 ..     262     282 ..     261     292 .. 0.86
   2 ?    1.9   0.1      0.55   1.5e+02      83     116 ..     305     339 ..     298     370 .. 0.72
   3 ?   -1.9   0.0       7.9   2.1e+03      85     110 ..     377     402 ..     340     408 .. 0.77
   4 !    8.6   0.0    0.0045       1.2       6      32 ..     539     565 ..     535     570 .. 0.93

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.21
                 EEEE-------HHHHHHHHHH CS
  PF03266.10   2 vfiTGepgvGKtTlvkkvlel 22 
                 v++ G+pg+GKt + + v+++
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANE 282
                 5788********999999876 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.55
                 HHHHHHHHHHH.HHH-EEEE------GGG-HHHHH CS
  PF03266.10  83 elalpalrnal.eeadviviDEIGkmElkskkfke 116
                 + + +a+++a  + + +i+iDEI ++  k  k   
  MMETSP1325-20131115|1831_1 305 SNLRKAFEEAEkNAPSIIFIDEIDSIAPKRDKTNG 339
                 5555667777645666*******776655555555 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 7.9
                 HHHHHHHHHHHH-EEEE------GGG CS
  PF03266.10  85 alpalrnaleeadviviDEIGkmElk 110
                 al+ + + ++e d+ v DE G++E +
  MMETSP1325-20131115|1831_1 377 ALRRFGRFDREIDIGVPDENGRLEIF 402
                 45555566688889999999999876 PP

  == domain 4    score: 8.6 bits;  conditional E-value: 0.0045
                 -------HHHHHHHHHH-...---EE- CS
  PF03266.10   6 GepgvGKtTlvkkvlellksegvkvgG 32 
                 G+pg GKt + k v+++++++ ++v+G
  MMETSP1325-20131115|1831_1 539 GPPGCGKTLMAKAVANECQANFISVKG 565
                 9********************999999 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.047        12      18      40 ..     259     281 ..     249     294 .. 0.83
   2 !    8.7   0.0     0.004       1.1      11      49 ..     525     563 ..     520     569 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.047
   PF13604.1  18 drvavvqGpAGtGKttvlkalre 40 
                  r +++ Gp+G+GKt + +a+++
  MMETSP1325-20131115|1831_1 259 PRGVLLYGPPGSGKTLIARAVAN 281
                 5567788**********999875 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.004
   PF13604.1  11 eavltsgdrvavvqGpAGtGKttvlkalrealeaagkrv 49 
                 e++ +s+++ ++  Gp+G GKt + ka+++ ++a+  +v
  MMETSP1325-20131115|1831_1 525 EKFGMSPSKGVLFYGPPGCGKTLMAKAVANECQANFISV 563
                 55667777888899****************999976665 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       3.8     1e+03      48      93 ..      71     115 ..      43     127 .. 0.76
   2 ?    5.4   0.0     0.024       6.5      51      78 ..     257     284 ..     217     370 .. 0.85
   3 !    8.3   0.0    0.0033      0.87      51      81 ..     530     560 ..     474     600 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 3.8
   PF05673.8  48 lkglpannvLLwGarGtGKSslvkallneyaeeg.Lrlievekedlk 93 
                 l+  +   vLL G++  GK +++  ll e +++g +++ +v +++l+
  MMETSP1325-20131115|1831_1  71 LQLFRGDTVLLKGKK--GKQTVCIVLLDEAQDDGnIKMNKVVRKNLR 115
                 555567789999998..588888889999888887888888888775 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.024
   PF05673.8  51 lpannvLLwGarGtGKSslvkallneya 78 
                 +p + vLL+G  G+GK  + +a+ ne+ 
  MMETSP1325-20131115|1831_1 257 KPPRGVLLYGPPGSGKTLIARAVANETG 284
                 56678******************99875 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0033
   PF05673.8  51 lpannvLLwGarGtGKSslvkallneyaeeg 81 
                  p++ vL++G  G+GK  + ka+ ne++++ 
  MMETSP1325-20131115|1831_1 530 SPSKGVLFYGPPGCGKTLMAKAVANECQANF 560
                 58899*********************99875 PP

>> PF01202.17  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0      0.02       5.3       1      21 [.     268     288 ..     268     317 .. 0.86
   2 ?    7.3   0.0     0.014       3.7       1      22 [.     541     562 ..     541     586 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.02
                 -----HHHHHHHHHHT--EEE CS
  PF01202.17   1 mGaGKstvGkllAkalglefi 21 
                 +G+GK+ +++++A++ g  f+
  MMETSP1325-20131115|1831_1 268 PGSGKTLIARAVANETGAFFF 288
                 7*************9998775 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.014
                 -----HHHHHHHHHHT--EEEE CS
  PF01202.17   1 mGaGKstvGkllAkalglefiD 22 
                 +G+GK+  +k++A++ + +fi 
  MMETSP1325-20131115|1831_1 541 PGCGKTLMAKAVANECQANFIS 562
                 7*****************9996 PP

>> PF09336.5  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   7.1e-05     0.019      19      59 ..     743     782 ..     735     784 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7.1e-05
                 CS-GGGB----B-HHHHHHHHHCS--SS-HHHHHHHHHHHH CS
   PF09336.5  19 dleeekllePpvtlkDflkalkttkptVskeDlekheeFtk 59 
                 d+ee++  +P +  k+f++a+++++ +Vs++ l k+  F +
  MMETSP1325-20131115|1831_1 743 DVEEDD-PVPYIGPKHFEEAVRASRRSVSEASLAKYASFAQ 782
                 555544.4799***************************976 PP

>> PF03152.9  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   4.9e-05     0.013      53     160 ..      82     194 ..      56     207 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 4.9e-05
   PF03152.9  53 neaakkvthcgVL.EFiaeeGtiylpewmmenlgleegdlveve.svslpkgkfvklqpqskdfldis.npkav.LetaL.rnfstLtkgdvieieyndkkyelkivevkpan 160
                 + ++ k+t c VL +   ++G i + + + +nl ++ gd v+v+ + ++p gk v + p    +  ++ n   v L+ ++ + +  + kgd + ++ + +  e+k+ve+ p+ 
  MMETSP1325-20131115|1831_1  82 KGKKGKQTVCIVLlDEAQDDGNIKMNKVVRKNLRVRLGDCVTVTsHGDVPYGKRVHVLPIDDTIEGVTgNLFDVyLKPYFlEAYRPVQKGDLFLVRQAMHPVEFKVVETDPSP 194
                 34666777777752667789***********************95579***********999998866266677788776599***************************986 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.047        13       4      23 ..     262     281 ..     260     296 .. 0.81
   2 ?    3.7   0.0       0.1        28       4      22 ..     535     553 ..     532     563 .. 0.85
   3 ?    0.5   0.0      0.96   2.6e+02     231     288 ..     578     648 ..     562     656 .. 0.70

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.047
   PF12846.2   4 tlilGppGsGKSvllkklvl 23 
                 +l++GppGsGK+  +++++ 
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVAN 281
                 6899********98887754 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.1
   PF12846.2   4 tlilGppGsGKSvllkklv 22 
                 +l++GppG+GK+  +k+++
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVA 553
                 689*********9999875 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.96
   PF12846.2 231 aaarrnfrapkdlrdkllviDEahrllgspega.............dfldelaregRkfgvgiilatQsls 288
                 a +r+ f++ +++++ +l++DE+  ++++  g              ++l e+   g k +v +i at  ++
  MMETSP1325-20131115|1831_1 578 ANVRELFEKARSAAPCVLFFDELDSIASARGGSsgdgggaadrvinQILTEIDGVGAKKNVFVIGATNRPD 648
                 677889999999999*********99977444223333335556656666666677777777777777665 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.018       4.9      18      40 ..     262     284 ..     250     293 .. 0.87
   2 ?    4.5   0.0     0.085        23      16      42 ..     533     559 ..     524     571 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.018
  PF02367.12  18 vlLsGdlGaGKTtlvkglakglg 40 
                 vlL G+ G+GKT +++++a++ g
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETG 284
                 89***************998765 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.085
  PF02367.12  16 dvvlLsGdlGaGKTtlvkglakglgvk 42 
                 + vl  G+ G GKT ++k++a++ + +
  MMETSP1325-20131115|1831_1 533 KGVLFYGPPGCGKTLMAKAVANECQAN 559
                 568899**************9988654 PP

>> PF05707.7  Zonular occludens toxin (Zot)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1     0.017       4.6       4      98 ..     263     337 ..     262     382 .. 0.56
   2 ?    1.6   0.0      0.56   1.5e+02       4      17 ..     536     549 ..     535     565 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.017
   PF05707.7   4 lvtGkpGsGKtleaVskdilpalkeGrkvitnidgLk.leriekvlgekvkarlidisnpegeelekyldkwrtldkgallviDEcqqifpvrage 98 
                 l +G pGsGKtl a         +e   +++ i+g + + +++    e+             ++l k++++  + +  ++++iDE   i p+r + 
  MMETSP1325-20131115|1831_1 263 LLYGPPGSGKTLIARAV-----ANETGAFFFLINGPEiMSKMAG---ES------------ESNLRKAFEEAEK-NAPSIIFIDEIDSIAPKRDKT 337
                 67999999999876443.....3344455555665443333333...22............2234444444444.455777777777777777664 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.56
   PF05707.7   4 lvtGkpGsGKtlea 17 
                 l++G pG GKtl a
  MMETSP1325-20131115|1831_1 536 LFYGPPGCGKTLMA 549
                 789********976 PP

>> PF08433.5  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.026       6.9       4      25 ..     262     283 ..     261     370 .. 0.75
   2 ?    4.6   0.0     0.053        14       4      31 ..     535     562 ..     534     587 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.026
   PF08433.5   4 vvltGlPssGKstvakeLakal 25 
                 v+l G P sGK+ +a+  a++ 
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANET 283
                 799*************998775 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.053
   PF08433.5   4 vvltGlPssGKstvakeLakaleeegrs 31 
                 v++ G P  GK+ +ak  a++ +++ +s
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANFIS 562
                 799***************9998886555 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.19        50      48      71 ..     262     285 ..     252     338 .. 0.80
   2 ?    7.5   0.0    0.0051       1.4      48     100 ..     535     586 ..     526     611 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.19
  PF03215.10  48 llltGPsGcgKsTtvkvlskelgi 71 
                 +ll GP+G+gK+ + + ++ e g 
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETGA 285
                 6899********999999998876 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0051
  PF03215.10  48 llltGPsGcgKsTtvkvlskelgikliewlnpvslkepdnehqksdfkgltek 100
                 +l  GP+GcgK+   k ++ e   ++i    p++l    +   + +++ l+ek
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTM-WFGESEANVRELFEK 586
                 5778********************9999988887653.344455555555555 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.037       9.9      20      42 ..     262     332 ..     252     471 .. 0.62
   2 ?    4.2   0.0     0.092        25      20      40 ..     535     555 ..     522     607 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.037
   PF13086.1  20 tliqGpPgtGKtttivelisql................................................l 42 
                  l+ GpPg+GKt    ++ ++                                                 +
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAVANETgaffflingpeimskmagesesnlrkafeeaeknapsiifideidsiaP 332
                 699*********66666665556666666666666666666555555555555554444444444444440 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.092
   PF13086.1  20 tliqGpPgtGKtttivelisq 40 
                  l  GpPg+GKt +  ++ ++
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANE 555
                 799*********554444444 PP

>> PF01568.16  Molydopterin dinucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0    0.0027      0.71      27      75 ..      56     106 ..      44     109 .. 0.79
   2 ?    2.2   0.0      0.51   1.4e+02      24      54 ..      97     127 ..      92     136 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0027
                 SSS.-EEEEHHHHHH-------EEEEEESSE.EEEEEEEEESSB----EEE CS
  PF01568.16  27 pep.vveinpedaaalgikdGdlVevesrrG.svvvkakvtervrpgvvfm 75 
                  ++ vv ++++++++l +  Gd+V ++ ++G ++v+ + ++e+   g + m
  MMETSP1325-20131115|1831_1  56 DDNsVVSLSQKKMEELQLFRGDTVLLKGKKGkQTVCIVLLDEAQDDGNIKM 106
                 3336***************************66666677777777777766 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.51
                 GGSSSS-EEEEHHHHHH-------EEEEEES CS
  PF01568.16  24 laepepvveinpedaaalgikdGdlVevesr 54 
                 +a+ ++ + +n+   + l ++ Gd V+v+s 
  MMETSP1325-20131115|1831_1  97 EAQDDGNIKMNKVVRKNLRVRLGDCVTVTSH 127
                 55666699*********************96 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.021       5.7      22      39 ..     260     275 ..     250     281 .. 0.77
   2 ?    3.0   0.0      0.24        63      19      39 ..     529     548 ..     522     554 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.021
   PF13555.1  22 kgkntlltGasGsGKSTl 39 
                 +g  +ll G+ GsGK+ +
  MMETSP1325-20131115|1831_1 260 RG--VLLYGPPGSGKTLI 275
                 45..9**********755 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.24
   PF13555.1  19 idpkgkntlltGasGsGKSTl 39 
                 ++p+ k +l+ G+ G GK+ +
  MMETSP1325-20131115|1831_1 529 MSPS-KGVLFYGPPGCGKTLM 548
                 5554.37***********755 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.034       9.1      22      39 ..     262     279 ..     257     350 .. 0.88
   2 ?    3.5   0.0      0.27        72      22      38 ..     535     551 ..     523     553 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.034
   PF13476.1  22 tlItGpNGsGKTTildAi 39 
                 +l++Gp GsGKT i  A 
  MMETSP1325-20131115|1831_1 262 VLLYGPPGSGKTLIARAV 279
                 589***********9996 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.27
   PF13476.1  22 tlItGpNGsGKTTildA 38 
                 +l++Gp G+GKT + +A
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKA 551
                 59**********88877 PP

>> PF07693.9  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.76     2e+02      18      37 ..     257     276 ..     245     291 .. 0.76
   2 ?    5.7   0.0      0.02       5.5     161     191 ..     305     337 ..     285     381 .. 0.75
   3 ?    0.4   0.0      0.88   2.4e+02      23      48 ..     535     578 ..     525     711 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.76
   PF07693.9  18 atpiviglyGkWGsGKssll 37 
                 ++p  + lyG+ GsGK+ + 
  MMETSP1325-20131115|1831_1 257 KPPRGVLLYGPPGSGKTLIA 276
                 6778899**********765 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.02
   PF07693.9 161 adiekkLda..lqkrlVvviDdLDRcepeevle 191
                 +++ k++++  ++ + +++iD++D++ p++ ++
  MMETSP1325-20131115|1831_1 305 SNLRKAFEEaeKNAPSIIFIDEIDSIAPKRDKT 337
                 33444444466799************9987555 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.88
   PF07693.9  23 iglyGkWGsGKssllnlledelkef..................k 48 
                 +  yG+ G+GK+ + + + +e + +                  +
  MMETSP1325-20131115|1831_1 535 VLFYGPPGCGKTLMAKAVANECQANfisvkgpelltmwfgeseA 578
                 66688889999999998888877664555554444444444441 PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.081        22      15      32 ..     260     277 ..     247     284 .. 0.85
   2 ?    0.4   0.0       1.2   3.3e+02     122     167 ..     316     370 ..     287     376 .. 0.63
   3 ?    1.1   0.0      0.76     2e+02      15      33 ..     533     551 ..     526     564 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.081
                 -EEEEEC-TT---HHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
  PF00270.24  15 gdvlvaaeTGsGKTlafl 32 
                 + vl+ ++ GsGKTl++ 
  MMETSP1325-20131115|1831_1 260 RGVLLYGPPGSGKTLIAR 277
                 67999**********985 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 1.2
                 TT.EEEEEECTHHHHHCTTTHH........HHHHHHHHSHHTTTSE.EEEEESS-T CS
                 xx.xxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxx.xxxxxxxxx RF
  PF00270.24 122 sq.vrllVlDEadrllsqgfsd........qlnqilqilcdgkrlq.vivlSATlp 167
                 ++  +++ +DE+d +  +   +         + q+l +++ +k++  v+v+ AT  
  MMETSP1325-20131115|1831_1 316 KNaPSIIFIDEIDSIAPKRD-KtngeverrIVSQMLTLMDGLKSRAnVVVIGATNR 370
                 344678889*****999522.23565555556667777766666555999999965 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.76
                 -EEEEEC-TT---HHHHHH CS
                 xxxxxxxxxxxxxxxxxxx RF
  PF00270.24  15 gdvlvaaeTGsGKTlafli 33 
                 + vl  ++ G GKTl++  
  MMETSP1325-20131115|1831_1 533 KGVLFYGPPGCGKTLMAKA 551
                 679999*********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (824 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      431  (0.0315243); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                        51  (0.00373025); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              51  [number of targets reported over threshold]
# CPU time: 1.66u 0.39s 00:00:02.04 Elapsed: 00:00:00.76
# Mc/sec: 2598.16
//
Query:       MMETSP1325-20131115|1845_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-14   53.3   0.0    4.8e-14   52.6   0.0    1.4  1  PF00005.22 ABC transporter
     0.0013   18.6   0.0     0.0016   18.3   0.0    1.1  1  PF13304.1  AAA domain
  ------ inclusion threshold ------
       0.02   14.6   0.1        0.1   12.4   0.1    2.2  1  PF13558.1  Putative exonuclease SbcCD, C subunit


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   1.1e-17   4.8e-14       9     118 .]       2     102 ..       1     102 [. 0.89

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 1.1e-17
                 TSS------EEE-..--BGGGB-HHHHHEEEE-------...--BHHHHHH----S---HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   9 gelkptegeievdndrkdlesdkleklrigyipqdpllf..peltvrenldmakeekktdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 gel+pt+g ++ +           ++lri++  q+  ++   e+t  e  +  + +k+  ++++++l ++g +++++++ +++LS Gqk rv+ A++ + kp+ll+LDEPtn
  MMETSP1325-20131115|1845_1   2 GELRPTAGAVRPH-----------QHLRISRFTQHFEDVlnLEQTPMEFFQELMGSKTGIDQVRNWLGRYGTTGDVQSQVMKHLSDGQKARVVFAKMAFDKPHLLMLDEPTN 102
                 7888888888888...........56779999999999988777787877777888889***************99999********************************8 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   3.6e-07    0.0016     220     302 ..      57     133 ..      15     134 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3.6e-07
   PF13304.1 220 dviflkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHSpvll 302
                   ++  +gd +   + +lSdG+k    ++ + ++ +    +l++DEp n L+  ++  l++ +++ +     +i+++H+  l+
  MMETSP1325-20131115|1845_1  57 LGRYGTTGDVQSQVMKHLSDGQKARVVFAKMAFDKP---HLLMLDEPTNPLDMNAIDSLARAINSFAG---GCILVSHDMRLI 133
                 566777788888888999*******99998888888...99**********************99988...999999998776 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   2.3e-05       0.1      62      89 ..      90     117 ..      51     118 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.3e-05
   PF13558.1  62 psirlvfLDEAFsklDeeniasllellr 89 
                 +++ l++LDE+++ lD + i+sl+++++
  MMETSP1325-20131115|1845_1  90 DKPHLLMLDEPTNPLDMNAIDSLARAIN 117
                 5799******************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 1286.74
//
Query:       MMETSP1325-20131115|1843_1  [L=632]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.36   10.7   5.7       0.88    9.5   3.9    1.6  1  PF05501.6 Domain of unknown function (DUF755)
        3.2    5.8  22.8       0.03   12.5   6.4    2.1  2  PF05793.7 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)


Domain annotation for each model (and alignments):
>> PF05501.6  Domain of unknown function (DUF755)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.9   0.00013      0.88      66     117 ..     560     611 ..     543     615 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00013
   PF05501.6  66 qkkrkeqkkssqthkkkkkksrnvssrsakkksakkrkksssSSssssssss 117
                 ++ +++q+++++t ++k  + ++ +++ a+k + + ++    SSs+s+s +s
  MMETSP1325-20131115|1843_1 560 REAQQQQQQELRTAEEKAARDKRAAEHAARKDEGRGSSLGLGSSSESESGDS 611
                 3445666677777778888888888888888777777666667777777666 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   3.9     0.054   3.7e+02     358     399 ..      27      68 ..      12      88 .. 0.60
   2 ?   12.5   6.4   4.4e-06      0.03     275     370 ..     524     616 ..     506     630 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.054
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX CS
   PF05793.7 358 deedsddsDideedsvslvkakKkkekkkeekvdsnessagn 399
                 +++dsd++D+++ + ++ v + Kk+  ++     + ++++++
  MMETSP1325-20131115|1843_1  27 SGSDSDSDDDEHTTPSASVGNGKKRTDPNGASAAEEKTEETG 68 
                 466777777777777777777666554444333333333333 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 4.4e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX..XXXXXXXXXXXXXXXXX CS
   PF05793.7 275 ddGddegrEedyisDdsasendpeeredklseEeeekkeieqdedeeekeeekkeeegklskkkkk..akklkkkkkekdkkdSddeedsddsDidee 370
                  d  d gr   +i+D +a++    er  ++++Ee +++ ++++++++++e  ++ee+    k+  +  a+k+ ++++ +    S++e++s dsD d+e
  MMETSP1325-20131115|1843_1 524 KDAADFGRVNQFIEDAKAED----ERRRVAKQEEAQREREREAQQQQQQELRTAEEKAARDKRAAEhaARKDEGRGSSL-GLGSSSESESGDSDLDDE 616
                 67778899999****99988....7777777777777777777777777777777777766665551156667777777.556669999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1397  (0.10218); expected 273.4 (0.02)
Passed bias filter:                      633  (0.046299); expected 273.4 (0.02)
Passed Vit filter:                        95  (0.00694851); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.31u 0.44s 00:00:01.75 Elapsed: 00:00:00.73
# Mc/sec: 2074.65
//
Query:       MMETSP1325-20131115|1846_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   13.9   0.3      0.039   13.2   0.2    1.3  1  PF04525.7  Tubby C 2
      0.062   13.1   0.2      0.062   13.1   0.2    2.5  3  PF06580.8  Histidine kinase
       0.14   11.5   6.0        0.3   10.5   2.0    2.8  3  PF14203.1  Domain of unknown function (DUF4319)
        2.3    7.8   7.8        1.5    8.4   0.4    2.3  2  PF00715.12 Interleukin 2
        8.8    6.7  10.8       0.13   12.5   0.8    2.7  3  PF05400.8  Flagellar protein FliT


Domain annotation for each model (and alignments):
>> PF04525.7  Tubby C 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   1.4e-05     0.039      65     160 ..     131     227 ..     128     236 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.4e-05
                 EEEEE--------EEEEE------GGGEEEEEE--.--------EEEE--..---...-----SEEEE--TTTT--EEE-.----EEEEEEE------ CS
   PF04525.7  65 LltirrKklslhdrWevyrgesterkdpvftvrks.sivslktkvsvfskrksnvvvkeeknedfeikGsfldrsckivd.esdkliAevkrKetikg 160
                 L+ ++ +k  l   +e+ ++e +e kd+v + +k+  ++++ ++++ f +r+++ +++   + ++e +G f d+++++ d e+  + Ae   K+++k+
  MMETSP1325-20131115|1846_1 131 LVFLKAEKKKLMAEYELLQQEIEE-KDLVAEKKKTvDKIKELSNLENFAVRDKYDMMEHIHRKELELDGIFEDDEYQVNDdERFPTPAEFWTKVNSKK 227
                 77788888899999******9995.9*****9999999*****************************************9888788888877777665 PP

>> PF06580.8  Histidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   2.2e-05     0.062      47      75 ..      44      72 ..      13      77 .. 0.86
   2 ?   -1.3   0.1       0.7   1.9e+03      38      69 ..     115     148 ..      96     161 .. 0.52
   3 ?   -1.1   0.2      0.58   1.6e+03      55      72 ..     160     177 ..     135     190 .. 0.53

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.2e-05
   PF06580.8 47 lssskelvtLeeEleliknYlalqklrfg 75
                +s+ ++ ++L++E +++k+Y+al++ r +
  MMETSP1325-20131115|1846_1 44 MSKATAAIRLNQEHAFMKQYVALMEQRKK 72
                4788899******************9954 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.7
   PF06580.8  38 klsdllrysl.ssskelvtLeeEle.liknYlal 69 
                 +l+++  ys  + ++elv L+ E + l+ +Y  l
  MMETSP1325-20131115|1846_1 115 RLAQFRAYSDyDFRQELVFLKAEKKkLMAEYELL 148
                 4444444444444666666666643133444444 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 0.58
   PF06580.8  55 tLeeEleliknYlalqkl 72 
                 + ++ ++ ik+  +l+++
  MMETSP1325-20131115|1846_1 160 EKKKTVDKIKELSNLENF 177
                 333333333333333333 PP

>> PF14203.1  Domain of unknown function (DUF4319)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.89   2.4e+03      10      30 ..      13      33 ..      11      35 .. 0.83
   2 ?    0.6   0.0      0.14   3.7e+02      30      58 ..      99     129 ..      87     134 .. 0.81
   3 ?   10.5   2.0   0.00011       0.3      12      53 ..     132     173 ..     130     184 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.89
   PF14203.1 10 mciyntgsReeliealkealp 30
                m  y++ +  +l e+l+ +lp
  MMETSP1325-20131115|1846_1 13 MVTYHQIDNAQLQEKLNLLLP 33
                667999999999999998876 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.14
   PF14203.1  30 pyl..ddedmreLaestlaKLqaltDaefae 58 
                 ++l   +++++eL++  la  +a +D +f +
  MMETSP1325-20131115|1846_1  99 EKLatCEAEIVELIDVRLAQFRAYSDYDFRQ 129
                 5555558999*****9999999999999975 PP

  == domain 3    score: 10.5 bits;  conditional E-value: 0.00011
   PF14203.1  12 iyntgsReeliealkealpylddedmreLaestlaKLqaltD 53 
                 ++ + ++++l+++ + ++++++++d+++  ++t++K+++l+ 
  MMETSP1325-20131115|1846_1 132 VFLKAEKKKLMAEYELLQQEIEEKDLVAEKKKTVDKIKELSN 173
                 678899*********************************997 PP

>> PF00715.12  Interleukin 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   1.0     0.025        70      28      98 ..      21      92 ..       2     103 .. 0.80
   2 ?    8.4   0.4   0.00054       1.5      68     132 ..     153     219 ..     134     224 .. 0.76

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.025
  PF00715.12 28 leqllldlqlllekvnnyknlklsrlltfkfylPkkatelkhlqcleeelkple.evlnlaqsknleledik 98
                  ql+  l+lll +  n +  +     t  + l ++ + +k+   l+e+ k l+ evl++ +s    l + k
  MMETSP1325-20131115|1846_1 21 NAQLQEKLNLLLPEHGNVEKGQAMSKATAAIRLNQEHAFMKQYVALMEQRKKLHtEVLDINRSALHGLTHEK 92
                4578888999**99999999998888999*****************99999996589*99999766555554 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00054
  PF00715.12  68 khlqcleeelkpleevlnlaqsknleledikelisnikvtvlklkG..settfeceyddetatvvef 132
                 ++ + + e+ k+++++ +l++  n+ ++d  ++++ i++  l+l G   + +++ + d+   t  ef
  MMETSP1325-20131115|1846_1 153 EEKDLVAEKKKTVDKIKELSNLENFAVRDKYDMMEHIHRKELELDGifEDDEYQVNDDERFPTPAEF 219
                 3444467888999********************************9433556666655555555555 PP

>> PF05400.8  Flagellar protein FliT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.69   1.9e+03      42      81 ..       6      45 ..       2      47 .. 0.71
   2 ?   12.5   0.8   4.8e-05      0.13      13      66 ..      63     118 ..      51     121 .. 0.85
   3 ?   -1.0   0.3      0.77   2.1e+03      40      40 ..     153     153 ..     127     196 .. 0.63

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.69
   PF05400.8 42 krellrrilandaairellqprldelekelkqlrrrkkan 81
                ++  l ++++ ++ + ++lq++l+ l  e ++  +++++ 
  MMETSP1325-20131115|1846_1  6 ADSHLTGMVTYHQIDNAQLQEKLNLLLPEHGNVEKGQAMS 45
                5666777788888888888888888777777777777665 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 4.8e-05
   PF05400.8  13 laaledereqlleklle.a.daelspeesekkrellrrilandaairellqprlde 66 
                  +al ++r +l  ++l  + +a +    ++kk++ l+++ + +a+i el+++rl++
  MMETSP1325-20131115|1846_1  63 YVALMEQRKKLHTEVLDiNrSALHGLTHEKKKADSLEKLATCEAEIVELIDVRLAQ 118
                 46788888888877777955999999****************************98 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.77
   PF05400.8  40 e 40 
                 e
  MMETSP1325-20131115|1846_1 153 E 153
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1170  (0.0855764); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1150.25
//
Query:       MMETSP1325-20131115|1848_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 317.88
//
Query:       MMETSP1325-20131115|1850_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0055   16.3   0.0     0.0064   16.1   0.0    1.0  1  PF01398.16 JAB1/Mov34/MPN/PAD-1 ubiquitin protease


Domain annotation for each model (and alignments):
>> PF01398.16  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   4.7e-07    0.0064      26      90 ..      14      77 ..       4      81 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 4.7e-07
  PF01398.16 26 eevmGlliGelnddttveitnvfalprsetekdvdaveldqeekksellkklrgrervVGWYhsh 90
                ++v Gll G++++   v+i++ ++l    +      +e d+ ++++el+ +  ++   +GWY+ +
  MMETSP1325-20131115|1850_1 14 SKVLGLLWGRQQGL-EVSIMDAMELAYTLDGNGAPIIEGDKVNSMKELYLENYKDRDLLGWYSVG 77
                489***********.******************9999999999999999987677*******866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 401.02
//
Query:       MMETSP1325-20131115|1853_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.30s 00:00:00.69 Elapsed: 00:00:00.66
# Mc/sec: 511.95
//
Query:       MMETSP1325-20131115|1855_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|1857_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 459.71
//
Query:       MMETSP1325-20131115|1856_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 930.35
//
Query:       MMETSP1325-20131115|1860_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-26   92.0   0.2    1.4e-26   91.7   0.1    1.1  1  PF01248.21 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
     0.0015   18.2   0.2     0.0017   18.0   0.1    1.1  1  PF08228.6  RNase P subunit Pop3
  ------ inclusion threshold ------
      0.055   12.1   0.0      0.064   11.9   0.0    1.1  1  PF11202.3  Protein of unknown function (DUF2983)


Domain annotation for each model (and alignments):
>> PF01248.21  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.7   0.1     3e-30   1.4e-26       3      92 ..      20     109 ..      18     111 .. 0.96

  Alignments for each domain:
  == domain 1    score: 91.7 bits;  conditional E-value: 3e-30
                 HHHHHHHHHHHTEEE---HHHHHHHHH-TECEEEEETTTSSGGHHCHHHHHHHHTTEEEEEESTTTTHHHHHHHTST-SEEEECE-TTCT CS
  PF01248.21   3 leeklkkalktgklvlGlkevtkalergeaklviiAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrpvsalaikdegdsk 92 
                 + +++++a + ++l++G +e+tk+l+rg  ++v++A+d+ep e+  +l+ lc++k+vpyv+v+sk +LG+++g +rpv++++++++++s+
  MMETSP1325-20131115|1860_1  20 ILDLVQQACNYKQLKKGANEATKTLNRGISEFVVLAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTSNEASQ 109
                 6788999*******************************************************************************9987 PP

>> PF08228.6  RNase P subunit Pop3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   3.7e-07    0.0017      37     145 ..      15     115 ..       3     126 .] 0.67

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 3.7e-07
   PF08228.6  37 kvlkklvrlleskeneeseltvglneivelLecsesddvvllvcnkDtPsvLlsqlpllvavanltvklvqlpksaqakldeklGlskagmllvrkdasldkklaklvs 145
                 ++  k++ l + +  + ++l  g ne  + L+  +  + v+l+ + + P+ +l +lpll++ +n  v+ v +p +    l  + G+s+  ++    +++   +l+++++
  MMETSP1325-20131115|1860_1  15 EMTVKILDLVQ-QACNYKQLKKGANEATKTLN-RGISEFVVLAADAE-PLEILLHLPLLCEDKN--VPYVFVPSKV--ALGRACGVSRP-VISCSVTSNEASQLKDQIQ 115
                 55555555555.667778999***********.88888888887777.****************..8888888765..35556666654.3333333333333444444 PP

>> PF11202.3  Protein of unknown function (DUF2983)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.4e-05     0.064     278     344 ..      16      84 ..       3      95 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.4e-05
   PF11202.3 278 kvveklaeeyeiedinliKPgiaEaTRvlLRRvPekvlvrdaedp..dvahlllLakekgveveevadl 344
                  +v+ l    +  + +++K g  EaT+ l R + e v+++ +++p   + hl lL+++k+v+   v+++
  MMETSP1325-20131115|1860_1  16 MTVKILDLVQQACNYKQLKKGANEATKTLNRGISEFVVLAADAEPleILLHLPLLCEDKNVPYVFVPSK 84 
                 55555566666778999******************998887776521578999********99887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       761  (0.0556612); expected 273.4 (0.02)
Passed bias filter:                      679  (0.0496635); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 603.88
//
Query:       MMETSP1325-20131115|1844_1  [L=419]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-09   38.4   0.1    2.8e-09   37.2   0.1    1.6  1  PF13640.1 2OG-Fe(II) oxygenase superfamily
      0.002   17.5   0.4     0.0041   16.6   0.3    1.5  1  PF13661.1 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.1   4.1e-13   2.8e-09       2      91 ..     197     284 ..     196     292 .. 0.86

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 4.1e-13
   PF13640.1   2 qlnrygpggflspHvDnse.........sssrrltlllylndpeweeeGGelelypsdrsegvakevedeevvpkpgrlvlFksdrslHrvtpvgaqgr 91 
                 ++ ry++g+++  H+D+++         +++  +t+ lylnd     eGG++++ +     ++ak ++   vvp+ g+++lF++  +lH+ +    +g 
  MMETSP1325-20131115|1844_1 197 RFLRYTEGTYFASHFDGQYtrreegerqYERSYITFQLYLNDGF---EGGATRFIN---GYDEAKGID---VVPRTGSVLLFEH-AVLHEGSVL-VSGV 284
                 5789*************99********99999*********555...********8...566777777...77***********.****98766.5555 PP

>> PF13661.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.3   5.9e-07    0.0041      10      66 ..     193     251 ..     179     255 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 5.9e-07
   PF13661.1  10 rhrfaltratrgdffdpHiDadpsql......gkprflsallYLNedwdadfdGgtlffddrd 66 
                 ++r ++ r+t g +f+ H D            + ++ +++ lYLN    + f+Gg ++f ++ 
  MMETSP1325-20131115|1844_1 193 NERLRFLRYTEGTYFASHFDGQYTRReegerqYERSYITFQLYLN----DGFEGGATRFINGY 251
                 788999****************999999*****************....999******99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.34s 00:00:01.06 Elapsed: 00:00:00.55
# Mc/sec: 1825.59
//
Query:       MMETSP1325-20131115|1861_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.017   14.5   1.1       0.05   13.0   0.0    2.2  3  PF00558.14 Vpu protein


Domain annotation for each model (and alignments):
>> PF00558.14  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2      0.37     5e+03      60      72 ..       6      18 ..       3      33 .. 0.62
   2 ?   -2.5   0.6      0.24   3.3e+03      15      30 ..      86     102 ..      83     112 .. 0.63
   3 ?   13.0   0.0   3.6e-06      0.05      14      68 ..     139     194 ..     132     204 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.37
  PF00558.14 60 eeeeelakLvhsh 72
                ++ ee  +L+++h
  MMETSP1325-20131115|1861_1  6 DAGEEQIELLEKH 18
                5555555666644 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.24
  PF00558.14  15 alii.aivvWtivyrey 30 
                  +++  i +W  ++  y
  MMETSP1325-20131115|1861_1  86 MFVLsHILFWVWAWPVY 102
                 44444788887755444 PP

  == domain 3    score: 13.0 bits;  conditional E-value: 3.6e-06
  PF00558.14  14 valiiaivvWtivyreykkikkqkeierl.ikrireraedSgnESdGeeeeelakL 68 
                 +++++  v+Wt+ +  y  + +  ei+ l ++ ++ r  dSg+  d +e  +  +L
  MMETSP1325-20131115|1861_1 139 LLMFAGTVIWTVRLFMYDAQARHPEIQVLgFEYLIARGKDSGYDDDDDEAGRAVRL 194
                 4556688*********************97899***********999997766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 1043.12
//
Query:       MMETSP1325-20131115|1862_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.052   12.3   0.8      0.055   12.2   0.6    1.0  1  PF10327.4 Serpentine type 7TM GPCR chemoreceptor Sri


Domain annotation for each model (and alignments):
>> PF10327.4  Serpentine type 7TM GPCR chemoreceptor Sri
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.6     4e-06     0.055     240     285 ..       2      52 ..       1      56 [. 0.75

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4e-06
   PF10327.4 240 rsLvaQfatslvlllPllilvlvvlfe.....lenlqeiveillavfslhS 285
                   L +Q+ats++++l+  + v+++ +      l+++q i  ++ + +++hS
  MMETSP1325-20131115|1862_1   2 AALKMQCATSPIFMLSWAVQVFLIGITdshpaLQYGQLILALVSLNACSHS 52 
                 6799**********9999988887654122225677888888888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 235.50
//
Query:       MMETSP1325-20131115|1859_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-22   79.2   0.6    1.1e-21   77.0   0.0    2.0  2  PF13426.1  PAS domain
      2e-09   36.9   6.6    3.9e-09   36.0   4.5    1.4  1  PF07716.10 Basic region leucine zipper
    1.1e-07   31.5   5.0    1.7e-07   30.9   3.4    1.3  1  PF00170.16 bZIP transcription factor
    7.9e-05   22.5   0.0    0.00016   21.6   0.0    1.5  1  PF08447.6  PAS fold
     0.0013   18.3   0.0     0.0025   17.4   0.0    1.5  1  PF00989.19 PAS fold
  ------ inclusion threshold ------
      0.042   13.7   0.5      0.068   13.0   0.3    1.3  1  PF07464.6  Apolipophorin-III precursor (apoLp-III)
       0.07   12.9   0.1       0.12   12.1   0.0    1.4  1  PF01166.13 TSC-22/dip/bun family
       0.12   12.1   0.0       0.59    9.9   0.0    2.1  2  PF13188.1  PAS domain


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.62   1.1e+03      44      71 ..      30      57 ..      19      58 .. 0.86
   2 !   77.0   0.0   6.6e-25   1.1e-21       4      98 ..     133     230 ..     130     231 .. 0.96

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.62
   PF13426.1 44 edeeavalleraleaggevevelelrrk 71
                + ++++a+++r +e+++    +++lr+k
  MMETSP1325-20131115|1859_1 30 PRPKTQAQIDRRRERNRILARRTRLRKK 57
                5788999*********999999888875 PP

  == domain 2    score: 77.0 bits;  conditional E-value: 6.6e-25
   PF13426.1   4 ilildpd...gtilfaNeaalrllGytreevlgksirdlfpededeeavalleraleaggevevelelrrkdgeefpvevtvtpvrdedgevvgiivi 98 
                 ++i+dp+   ++i+fa++++l+ +Gyt e+vlg+++r+l+++++d+e+v +++  +e+g++v+v + ++r dg+ f++++ v+++rd +++vv+++++
  MMETSP1325-20131115|1859_1 133 FCITDPSlpdNPIVFASQSFLETTGYTMEQVLGRNCRFLQGPETDREKVMQIRYGIERGEDVSVCILNYRADGTSFWNQFFVAALRDVNKRVVNYVGV 230
                 7889998888*************************************************************************************987 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   4.5   2.3e-12   3.9e-09       2      49 ..      34      82 ..      33      83 .. 0.91

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 2.3e-12
  PF07716.10  2 ddeyrerRr.rNreAArrsRekkkakeeeleervkeLeeeNaqLrqkve 49
                + ++ +rRr rNr+ Arr+R +kk   e+l+++v eL++eN+ L++ ++
  MMETSP1325-20131115|1859_1 34 TQAQIDRRReRNRILARRTRLRKKFFFESLQKQVSELQRENSVLKDIIK 82
                5677789999**********************************98775 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   3.4     1e-10   1.7e-07       6      50 ..      38      82 ..      33      92 .. 0.90

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 1e-10
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......H CS
  PF00170.16  6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                  rr+++NR+ Arr R+RKk   e L++ v eL+ eN+ Lk+ ++
  MMETSP1325-20131115|1859_1 38 IDRRRERNRILARRTRLRKKFFFESLQKQVSELQRENSVLKDIIK 82
                579*************************************98776 PP

>> PF08447.6  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   9.2e-08   0.00016       1      90 [.     145     230 ..     145     231 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 9.2e-08
   PF08447.6   1 iiyvsprveeilGyspeel.gkssyedwldlvhpe.DrervrealeelllkkgevysfeyRirrkdGeyrWveargrvirdengkpvrvigv 90 
                 i+++s+++ e++Gy+ e++ g++    ++ l  pe Dre+v++      + +ge +s+ + + r+dG+  W +    ++rd n ++v ++gv
  MMETSP1325-20131115|1859_1 145 IVFASQSFLETTGYTMEQVlGRN----CRFLQGPEtDREKVMQIRY--GIERGEDVSVCILNYRADGTSFWNQFFVAALRDVNKRVVNYVGV 230
                 589****************6655....5555555546666666666..6888999***********************************98 PP

>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.5e-06    0.0025       6     108 ..     125     229 ..     121     233 .. 0.79

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.5e-06
                 CCCT--SBEEEES...----EEEETHHHHHHH-S-HHHHS---CCHHCSCCHCCTCCHHHHHHHHHH--ECEEEEECCS.SSSSEEEEEEEEEECS-S-E-.CEEE CS
  PF00989.19   6 ileslpdpifvvD...edgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfklrdgrpihlevraspvrdaggeilgflg 108
                  l+++    +++D    d  i+++++++ e +G++ e+vlg++   l  +e+d+e + +++  +e ge+ +    + +  dg+ ++ +  ++ +rd  +++  ++g
  MMETSP1325-20131115|1859_1 125 ALQAAQRSFCITDpslPDNPIVFASQSFLETTGYTMEQVLGRNCRFLQGPETDREKVMQIRYGIERGEDVSVCILNYRA-DGTSFWNQFFVAALRDVNKRVVNYVG 229
                 56777777888888888999*************************8888888777777777777777666655555555.99999999999999998888776655 PP

>> PF07464.6  Apolipophorin-III precursor (apoLp-III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3     4e-05     0.068       8      75 ..      59     125 ..      54     133 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 4e-05
   PF07464.6   8 fqktleesvnelkkskdtqevvkaik.egsdkvlqqlkalkasLdealkdangkakealeqlrekiEkt 75 
                 f  +l+++v el++  +   + + ik + sd   + l++  asL   +++++gka e+l+ +  ++ ++
  MMETSP1325-20131115|1859_1  59 FFESLQKQVSELQRENS--VLKDIIKvNMSDVSAKILSDCDASLPTIVTEHSGKATEILNRSDFNLMQA 125
                 45677777777765533..233344425699999*************************9998887665 PP

>> PF01166.13  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.2e-05      0.12      25      45 ..      62      82 ..      54      95 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 7.2e-05
  PF01166.13 25 eLeeknsklerEnellkslas 45
                 L++++s+l+rEn++lk +++
  MMETSP1325-20131115|1859_1 62 SLQKQVSELQRENSVLKDIIK 82
                699**************9986 PP

>> PF13188.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00035      0.59      13      54 ..     132     179 ..     120     190 .. 0.70
   2 ?   -1.4   0.0       1.2   2.1e+03      22      39 ..     206     221 ..     193     241 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00035
   PF13188.1  13 giivvd.....gdrilevNpaalrllGys...llgellgdllpdleaele 54 
                  ++++d     +  i+++ +++l+ +Gy+   +lg+++ ++l + e ++e
  MMETSP1325-20131115|1859_1 132 SFCITDpslpdNP-IVFASQSFLETTGYTmeqVLGRNC-RFLQGPETDRE 179
                 5666665443334.9**************888888888.66666555555 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 1.2
   PF13188.1  22 ilevNpaalrllGysllg 39 
                   ++N+ +   l   +++
  MMETSP1325-20131115|1859_1 206 TSFWNQFFVAALR--DVN 221
                 4556666665554..333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       641  (0.0468841); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.61u 0.41s 00:00:01.02 Elapsed: 00:00:00.50
# Mc/sec: 1399.47
//
Query:       MMETSP1325-20131115|1863_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-25   87.7   0.0    4.8e-25   87.1   0.0    1.2  1  PF13806.1  Rieske-like [2Fe-2S] domain
    8.4e-08   31.5   0.0    1.2e-07   31.0   0.0    1.2  1  PF00355.21 Rieske [2Fe-2S] domain


Domain annotation for each model (and alignments):
>> PF13806.1  Rieske-like [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.1   0.0     7e-29   4.8e-25       1     102 [.      13     114 ..      13     115 .. 0.99

  Alignments for each domain:
  == domain 1    score: 87.1 bits;  conditional E-value: 7e-29
   PF13806.1   1 sWvpvcklddlvpetgvaalvdgeqvalfrlekeevyAienldPaskanvlsrGlvgdlkgelvvasPlykqhfdLktGecledeevslkvypvrvedgkve 102
                 sWv+  +l+d++ +tg  +l +++q+a+fr+ ++e y ++n++P  +a vl++Gl+gd +g + va+Pl+k++f+L+tGecl+d+++++ ++p+r+++++ve
  MMETSP1325-20131115|1863_1  13 SWVDFGPLSDFPVKTGTPVLYGKTQLAVFRYGEDEWYMTQNMSPKRRAFVLAEGLLGDADGVPKVACPLHKNQFSLSTGECLDDPSLKIMTFPMRLAGERVE 114
                 69*************************************************************************************************997 PP

>> PF00355.21  Rieske [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   1.7e-11   1.2e-07       1      92 [.      13     105 ..      13     118 .. 0.81

  Alignments for each domain:
  == domain 1    score: 31.0 bits;  conditional E-value: 1.7e-11
                 CEEEEEEGGGSCCTCEEEEEEG.GSEEEEEECTCC-EEEEESB-STSS-BTTECEBCSCTTC..EEE-STTSSEEETT--EEEESTTCS-SCEEB CS
  PF00355.21   1 swlevareeeipepgdgkttkl.gedlvvvrdkdgeivalnniCtHrgcplsegkaggekgg..vleCpcHgwaydlatgkvvkgpatkvlklyp 92 
                 sw+  +  +++p  + g  + + +++l v+r  ++e++ ++n+ + r++ ++ ++  g+++g  ++ Cp+H+ +++l+tg++ + p   +  ++p
  MMETSP1325-20131115|1863_1  13 SWVDFGPLSDFPV-KTGTPVLYgKTQLAVFRYGEDEWYMTQNMSPKRRAFVLAEGLLGDADGvpKVACPLHKNQFSLSTGECLDDPSL-KIMTFP 105
                 6899999999999.566666662555555558888****************99999999977678*********************98.444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 911.66
//
Query:       MMETSP1325-20131115|1858_1  [L=402]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 1852.57
//
Query:       MMETSP1325-20131115|1865_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-05   23.0   0.1    8.8e-05   22.4   0.1    1.3  1  PF13499.1 EF-hand domain pair
    0.00011   21.6   0.3    0.00021   20.7   0.2    1.5  1  PF13833.1 EF-hand domain pair
     0.0027   17.3   0.4      0.034   13.9   0.1    2.4  2  PF13405.1 EF-hand domain
  ------ inclusion threshold ------
      0.019   13.1   0.1      0.022   12.9   0.0    1.1  1  PF05664.6 Protein of unknown function (DUF810)


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   2.6e-08   8.8e-05       5      59 ..      34      88 ..      14      91 .. 0.92

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 2.6e-08
   PF13499.1  5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsf 59
                +Fk +D  +dg++   +++r+l  +++  +++ ++ +l  +++++D   + ++++
  MMETSP1325-20131115|1865_1 34 EFKGYDAAKDGSVKAKDFKRVLEDTLDMSTEDLSKSELKGLVRRFDPAENDQIDY 88
                6***********************************************9999987 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.2   6.2e-08   0.00021       1      44 [.      42      88 ..      39      93 .. 0.95

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 6.2e-08
   PF13833.1  1 ekGlItreeLkral.allglkg..lseeevdilfrefDtdgdGkisf 44
                ++G++ ++++kr l ++l ++   ls++e+  l+r fD   +  i++
  MMETSP1325-20131115|1865_1 42 KDGSVKAKDFKRVLeDTLDMSTedLSKSELKGLVRRFDPAENDQIDY 88
                589***************999999******************99997 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1     1e-05     0.034       6      27 ..      35      56 ..      30      77 .. 0.90
   2 ?    1.3   0.0      0.11   3.7e+02       3      25 ..      72      94 ..      70      99 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1e-05
                -GCC-------B---HHHHHHH CS
   PF13405.1  6 FklfDkdgdGkidaeELrdaLr 27
                Fk +D  +dG + a++++++L 
  MMETSP1325-20131115|1865_1 35 FKGYDAAKDGSVKAKDFKRVLE 56
                9*******************98 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.11
                H---GCC-------B---HHHHH CS
   PF13405.1  3 reaFklfDkdgdGkidaeELrda 25
                + + + fD   + +id   + ++
  MMETSP1325-20131115|1865_1 72 KGLVRRFDPAENDQIDYVLFTNW 94
                5567899*999999998655555 PP

>> PF05664.6  Protein of unknown function (DUF810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   6.5e-06     0.022     490     541 ..      59     113 ..      47     116 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.5e-06
   PF05664.6 490 vqiaavds.ddggkavvrelePyevesvisnLvktW..inekldrlkeivdRale 541
                 +++ ++d  +   k++vr + P e +++  +L  +W  ++++l ++++ v+R+l+
  MMETSP1325-20131115|1865_1  59 LDMSTEDLsKSELKGLVRRFDPAENDQIDYVLFTNWltVEDQLPAVEKRVARCLQ 113
                 3477788768999***********************44489************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 581.97
//
Query:       MMETSP1325-20131115|1864_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.31s 00:00:00.67 Elapsed: 00:00:00.63
# Mc/sec: 387.98
//
Query:       MMETSP1325-20131115|1867_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.4    7.2   6.3        4.4    6.3   4.4    1.4  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   4.4   0.00032       4.4     197     251 ..     103     159 ..      84     175 .. 0.54

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00032
                 HHHHHHS----------..--CSC--XXXXXXXXXXXXXX..XXXXXX........X CS
  PF01213.14 197 aYiKeyhttGltWskkgdaaaaksalaavsasktaaPppP..pppppPsvdtikdsv 251
                  + K+y  +     k++  aaak+ + a + + + +P pP  ppp+pPs++    + 
  MMETSP1325-20131115|1867_1 103 DFYKDYQVAITKHLKENAGAAAKPDANADADADADSPAPPtvPPPAPPSAQPQAAAA 159
                 555666555444445554455555554444455555555544666666444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       596  (0.0435927); expected 273.4 (0.02)
Passed bias filter:                      445  (0.0325483); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1129.05
//
Query:       MMETSP1325-20131115|1870_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 397.80
//
Query:       MMETSP1325-20131115|1871_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   28.7   0.0      2e-06   28.0   0.0    1.3  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   1.5e-10     2e-06     115     153 ..       6      45 ..       2      48 .. 0.87

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 1.5e-10
                 ----------..-----------STTT----TTTTT----- CS
  PF00504.16 115 glgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvv 153
                 + +fdp+g+    +eeek +  ++E++nGR+AM+a+++++ 
  MMETSP1325-20131115|1871_1   6 D-LFDPFGILppMTEEEKVRGLKAEVNNGRAAMLAIFALLS 45 
                 5.4*****7779999999999****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.87
# Mc/sec: 459.99
//
Query:       MMETSP1325-20131115|1869_1  [L=344]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.57
# Mc/sec: 1421.29
//
Query:       MMETSP1325-20131115|1873_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-05   23.4   0.0      6e-05   22.5   0.0    1.5  1  PF10405.4 Rad4 beta-hairpin domain 3


Domain annotation for each model (and alignments):
>> PF10405.4  Rad4 beta-hairpin domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   4.4e-09     6e-05      41      76 .]       2      36 ..       1      36 [. 0.95

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 4.4e-09
                B-EEEEEEE-----EEEEE---EEEGGGHHHHHHHH CS
   PF10405.4 41 akavtGFefkkkgqakpvidGvvVaeedeeallkaw 76
                a+++tGF +  +g+a+p ++G++V++e++  l +a+
  MMETSP1325-20131115|1873_1  2 AQVLTGFGR-SAGRAVPTMEGIIVCQEHAGLLTEAY 36
                799******.*******************9999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       534  (0.0390579); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 474.91
//
Query:       MMETSP1325-20131115|1874_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.46s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 577.08
//
Query:       MMETSP1325-20131115|1876_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-11   42.0   0.0    1.1e-06   28.8   0.0    1.7  2  PF13637.1  Ankyrin repeats (many copies)
    1.3e-09   38.1   0.0    1.4e-09   38.0   0.0    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
    2.3e-09   37.0   0.0    2.9e-09   36.7   0.0    1.2  1  PF13857.1  Ankyrin repeats (many copies)
    3.1e-08   32.9   0.0    8.2e-05   22.1   0.0    2.6  3  PF00023.25 Ankyrin repeat
    2.6e-06   27.0   0.0     0.0012   18.8   0.0    2.5  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   3.1e-06    0.0085      20      51 ..       3      34 ..       2      35 .. 0.85
   2 !   28.8   0.0     4e-10   1.1e-06       3      47 ..      19      63 ..      17      64 .] 0.94

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 3.1e-06
   PF13637.1 20 LlekgidinrtdesGntaLhiAalrgnieilk 51
                L+e g+++    + G+t+++iAa +g++e+++
  MMETSP1325-20131115|1876_1  3 LHELGANVETPAKGGFTPVYIAAHKGHVEVVR 34
                66778887777678****************97 PP

  == domain 2    score: 28.8 bits;  conditional E-value: 4e-10
   PF13637.1  3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgni 47
                t++  aa++g++e+v+   e g+++    ++G t+++iAa +g++
  MMETSP1325-20131115|1876_1 19 TPVYIAAHKGHVEVVRVVAELGANVETPKKDGATPVYIAAHKGHV 63
                88999********************9999**************97 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0     5e-13   1.4e-09      16      72 ..       3      63 ..       1      64 [] 0.95

  Alignments for each domain:
  == domain 1    score: 38.0 bits;  conditional E-value: 5e-13
   PF12796.2 16 Llekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghl 72
                L+e ga+v++    g tp+ +Aa +g++e+v++  e ga+v++ +k+g tp ++A+ +gh+
  MMETSP1325-20131115|1876_1  3 LHELGANVETpakgGFTPVYIAAHKGHVEVVRVVAELGANVETPKKDGATPVYIAAHKGHV 63
                7899*****99999999******************************************96 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.0   1.1e-12   2.9e-09       1      56 []       3      57 ..       3      63 .. 0.98

  Alignments for each domain:
  == domain 1    score: 36.7 bits;  conditional E-value: 1.1e-12
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                L+e g a+v +  +gg+tp ++Aa++g++evvr   + ga+  +  +dg t++ +A
  MMETSP1325-20131115|1876_1  3 LHELG-ANVETPAKGGFTPVYIAAHKGHVEVVRVVAELGANVETPKKDGATPVYIA 57
                89999.***********************************************998 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         1   2.7e+03      21      28 ..       3      10 ..       2      12 .. 0.73
   2 !   22.1   0.0     3e-08   8.2e-05       2      28 ..      17      43 ..      16      46 .. 0.95
   3 !    8.2   0.0   0.00072         2       1      15 [.      49      63 ..      49      64 .] 0.93

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1
                HHHTTSST CS
  PF00023.25 21 LlsqGAdl 28
                L + GA++
  MMETSP1325-20131115|1876_1  3 LHELGANV 10
                55679997 PP

  == domain 2    score: 22.1 bits;  conditional E-value: 3e-08
                SCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdl 28
                GfTP  +Aa++g++evv+   + GA++
  MMETSP1325-20131115|1876_1 17 GFTPVYIAAHKGHVEVVRVVAELGANV 43
                9************************98 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.00072
                TSCBHHHHHHHTTHH CS
  PF00023.25  1 dGfTPLHlAalrgnl 15
                dG TP  +Aa++g++
  MMETSP1325-20131115|1876_1 49 DGATPVYIAAHKGHV 63
                8************96 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.7   4.8e+03      21      28 ..       3      10 ..       2      12 .. 0.71
   2 !   18.8   0.0   4.3e-07    0.0012       2      29 ..      17      44 ..      16      45 .. 0.94
   3 !    5.7   0.0    0.0069        19       1      15 [.      49      63 ..      49      64 .] 0.89

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.7
   PF13606.1 21 Llengadi 28
                L e ga++
  MMETSP1325-20131115|1876_1  3 LHELGANV 10
                56788887 PP

  == domain 2    score: 18.8 bits;  conditional E-value: 4.3e-07
   PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                G Tp ++Aa++g++e+v+   e ga++ 
  MMETSP1325-20131115|1876_1 17 GFTPVYIAAHKGHVEVVRVVAELGANVE 44
                89***********************985 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.0069
   PF13606.1  1 nGnTpLhlAasngri 15
                +G Tp ++Aa++g++
  MMETSP1325-20131115|1876_1 49 DGATPVYIAAHKGHV 63
                688*********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.25u 0.43s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 333.41
//
Query:       MMETSP1325-20131115|1878_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-05   24.0   5.8     0.0033   17.2   0.7    2.9  2  PF05725.7  FNIP Repeat
    0.00021   20.8   1.3       0.73    9.4   0.0    2.8  3  PF13013.1  F-box-like domain
     0.0078   16.1   8.9         13    6.4   0.1    4.8  5  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.079   12.6   0.4       0.15   11.8   0.3    1.5  1  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
       0.22   11.5  15.8       0.88    9.7   0.4    4.9  4  PF00560.28 Leucine Rich Repeat
        5.8    6.5  14.4         15    5.2   0.6    3.8  2  PF12799.2  Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.7   1.4e-06    0.0033       7      41 ..      10      44 ..       7      46 .. 0.90
   2 !    8.4   0.2   0.00082       1.9      30      44 .]      86     100 ..      72     100 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.4e-06
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyF 41
                i  LP+++++Lil +  n + +i  LP+S++ L++
  MMETSP1325-20131115|1878_1 10 IKDLPQSVTNLILSDCENLEGNIKDLPQSVTNLNL 44
                668**********888888899**********986 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00082
   PF05725.7  30 gsLPnSlkeLyFgyf 44 
                   LP+Sl eL ++y+
  MMETSP1325-20131115|1878_1  86 KDLPQSLLELDLSYC 100
                 559**********96 PP

>> PF13013.1  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00061       1.4      21      39 ..       9      27 ..       4      31 .. 0.88
   2 ?    0.7   0.0      0.17   3.8e+02      22      38 ..      32      48 ..      28      59 .. 0.83
   3 !    9.4   0.0   0.00032      0.73      21      39 ..      84     102 ..      68     109 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00061
   PF13013.1 21 tllDLPdellelIfnyCkd 39
                 + DLP+ + +lI++ C++
  MMETSP1325-20131115|1878_1  9 NIKDLPQSVTNLILSDCEN 27
                589**************86 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.17
   PF13013.1 22 llDLPdellelIfnyCk 38
                + DLP+ + +l + +C 
  MMETSP1325-20131115|1878_1 32 IKDLPQSVTNLNLLGCG 48
                89****99999888885 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.00032
   PF13013.1  21 tllDLPdellelIfnyCkd 39 
                  + DLP+ llel ++yC +
  MMETSP1325-20131115|1878_1  84 NIKDLPQSLLELDLSYCVN 102
                 69***************75 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.3   5.2e+03      10      14 ..       3       7 ..       2      14 .. 0.51
   2 !    5.7   0.1    0.0094        21       2      14 ..      16      29 ..      15      36 .. 0.68
   3 ?    4.3   0.2     0.027        61       2      14 ..      38      51 ..      37      54 .. 0.83
   4 ?    1.9   0.0      0.18     4e+02       3      12 ..      62      71 ..      61      89 .. 0.73
   5 !    6.4   0.1    0.0055        13       2      16 ..      91     110 ..      90     111 .. 0.70

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 2.3
   PF13504.1 10 gnrLt 14
                gn+Lt
  MMETSP1325-20131115|1878_1  3 GNDLT 7 
                67766 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0094
   PF13504.1  2 nLkeLdLsgnr.Lt 14
                + ++L Ls+++ L+
  MMETSP1325-20131115|1878_1 16 SVTNLILSDCEnLE 29
                689*******7654 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.027
   PF13504.1  2 nLkeLdLsgnr.Lt 14
                + ++L+L g++ L+
  MMETSP1325-20131115|1878_1 38 SVTNLNLLGCGnLE 51
                689*******8675 PP

  == domain 4    score: 1.9 bits;  conditional E-value: 0.18
   PF13504.1  3 LkeLdLsgnr 12
                Lk+Ld+  ++
  MMETSP1325-20131115|1878_1 62 LKKLDICFCG 71
                8999996663 PP

  == domain 5    score: 6.4 bits;  conditional E-value: 0.0055
   PF13504.1   2 nLkeLdLsgn.....rLtsL 16 
                 +L eLdLs++     +L+s+
  MMETSP1325-20131115|1878_1  91 SLLELDLSYCvnlegNLESV 110
                 799******96555445555 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   6.4e-05      0.15      67     105 ..       5      43 ..       2      64 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.4e-05
   PF04513.7  67 tlltnLtdalnalqdtlrneLtnlnsiltnLlssvtNin 105
                 +l+ n++d  +++++ + ++ +nl+ ++ +L  svtN+n
  MMETSP1325-20131115|1878_1   5 DLTGNIKDLPQSVTNLILSDCENLEGNIKDLPQSVTNLN 43 
                 5666777777777788888999***************98 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.41   9.4e+02       9      18 ..       3      16 ..       2      20 .. 0.54
   2 ?    1.6   3.5      0.18     4e+02       3      17 ..      18      37 ..      16      60 .. 0.72
   3 ?    2.1   0.0      0.12   2.7e+02       2      12 ..      62      72 ..      61      94 .. 0.63
   4 ?    9.7   0.4   0.00039      0.88       1      16 [.      91     108 ..      91     112 .] 0.85

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.41
                SSBCB.C...HHHH CS
  PF00560.28  9 gNnlt.s...lpps 18
                gN lt +   lp s
  MMETSP1325-20131115|1878_1  3 GNDLTgNikdLPQS 16
                66666554446665 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.18
                SEEEETSS.BCB.C...HHH CS
  PF00560.28  3 eeLdLsgN.nlt.s...lpp 17
                + L Ls++ nl+ +   lp 
  MMETSP1325-20131115|1878_1 18 TNLILSDCeNLEgNikdLPQ 37
                67888888888877555444 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.12
                ESEEEETSSBC CS
  PF00560.28  2 LeeLdLsgNnl 12
                L++Ld+ ++  
  MMETSP1325-20131115|1878_1 62 LKKLDICFCGY 72
                78899988854 PP

  == domain 4    score: 9.7 bits;  conditional E-value: 0.00039
                 TESEEEETSS.BCB.CHH CS
  PF00560.28   1 nLeeLdLsgN.nlt.slp 16 
                 +L eLdLs++ nl+ +l 
  MMETSP1325-20131115|1878_1  91 SLLELDLSYCvNLEgNLE 108
                 6889*********98865 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   5.3      0.04        90       3      25 ..      17      44 ..       2      79 .. 0.84
   2 ?    5.2   0.6    0.0065        15      16      34 ..      81     100 ..      62     112 .] 0.57

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.04
   PF12799.2  3 LevLdLsnN.....nIkdlppelanLpn 25
                 + L Ls++     nIkdlp ++ nL+ 
  MMETSP1325-20131115|1878_1 17 VTNLILSDCenlegNIKDLPQSVTNLNL 44
                5778999988788889999998888763 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0065
   PF12799.2  16 lppelanLp.nLktLnLsnN 34 
                 + + ++ Lp +L +L+Ls++
  MMETSP1325-20131115|1878_1  81 ITGNIKDLPqSLLELDLSYC 100
                 33345555535666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 571.05
//
Query:       MMETSP1325-20131115|1879_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 285.52
//
Query:       MMETSP1325-20131115|1875_1  [L=555]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       783  (0.0572703); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.86u 0.36s 00:00:01.22 Elapsed: 00:00:00.85
# Mc/sec: 1564.68
//
Query:       MMETSP1325-20131115|1882_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   14.4   0.1      0.022   14.4   0.1    1.0  1  PF13622.1 Thioesterase-like superfamily


Domain annotation for each model (and alignments):
>> PF13622.1  Thioesterase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   1.6e-06     0.022     137     201 ..      11      71 ..       1      79 [. 0.73

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.6e-06
   PF13622.1 137 rkvdmapynegkspepggdavldaWvrfrdplnahdrna...LaflaDalppatlaaldgaayaaaat 201
                  ++++ap     +p+pg++ ++++ +r+  ++++   ++   ++f+aDa+ p+ +++ + ++ +a+a+
  MMETSP1325-20131115|1882_1  11 AMASAAP-----QPGPGDEEEATTLIRPPSKDKD--AAGpseAPFVADASKPVEIWSRRSMSLIAVAS 71 
                 3333344.....4****************99986..332345*************9988876666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 390.00
//
Query:       MMETSP1325-20131115|1877_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-57  191.2   0.1      8e-57  191.0   0.0    1.1  1  PF00071.17 Ras family
    5.4e-23   81.6   0.0    9.8e-23   80.7   0.0    1.4  1  PF08477.8  Miro-like protein
    1.4e-15   56.8   0.0    1.6e-15   56.6   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    3.7e-09   36.1   0.1    1.3e-08   34.3   0.0    1.7  1  PF00009.22 Elongation factor Tu GTP binding domain
    6.9e-08   31.8   0.0    8.6e-08   31.5   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    3.4e-05   23.6   0.0    5.6e-05   23.0   0.0    1.5  1  PF01926.18 50S ribosome-binding GTPase
     0.0025   16.9   0.0     0.0042   16.1   0.0    1.4  1  PF09439.5  Signal recognition particle receptor beta subunit
     0.0037   17.5   0.3     0.0077   16.5   0.2    1.9  1  PF13191.1  AAA ATPase domain
     0.0037   16.3   0.3      0.015   14.3   0.1    2.0  2  PF03193.11 Protein of unknown function, DUF258
     0.0044   16.6   0.2      0.015   14.8   0.0    1.8  2  PF01637.13 Archaeal ATPase
     0.0091   15.0   0.5       0.15   11.0   0.0    2.0  2  PF06745.8  KaiC
  ------ inclusion threshold ------
      0.033   13.6   0.0       0.13   11.6   0.0    1.9  2  PF13479.1  AAA domain
      0.034   12.7   0.0        2.3    6.7   0.0    2.3  2  PF00503.15 G-protein alpha subunit
      0.035   13.8   0.0      0.068   12.9   0.0    1.5  1  PF13173.1  AAA domain
      0.042   12.6   0.0       0.19   10.5   0.0    1.8  2  PF05673.8  Protein of unknown function (DUF815)
      0.048   13.2   0.0      0.083   12.4   0.0    1.5  1  PF03266.10 NTPase
      0.057   12.6   0.0      0.092   12.0   0.0    1.3  1  PF08741.5  YwhD family
      0.081   12.3   0.0       0.16   11.3   0.0    1.4  1  PF13555.1  P-loop containing region of AAA domain
      0.089   12.3   0.1       0.17   11.5   0.0    1.6  1  PF07728.9  AAA domain (dynein-related subfamily)
      0.091   11.8   0.3        1.5    7.8   0.0    2.1  2  PF02421.13 Ferrous iron transport protein B
      0.098   12.6   0.1       0.38   10.7   0.1    2.1  1  PF13401.1  AAA domain
        0.1   11.2   0.1        6.1    5.4   0.0    2.1  2  PF03308.11 ArgK protein


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.0   0.0   1.3e-59     8e-57       1     160 [.      12     177 ..      12     179 .. 0.99

  Alignments for each domain:
  == domain 1    score: 191.0 bits;  conditional E-value: 1.3e-59
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGG......G-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDlee......kravsteegeelakelglkfletSAktnenveeafeellrei 160
                 K+vl+Gd++vGK+sl+lrf++++Fk  +esTig+ f++k+++v+g+ +k++iwDTAGqe++ksl+++yy++a ++++vydit+r++f+++++w++e+++  +e+++i++ GnK+Dl e       r+v+ +e+e++a e+g+ f etSAkt+ nv+e+fe++ r++
  MMETSP1325-20131115|1877_1  12 KVVLLGDTGVGKSSLVLRFITNEFKPYQESTIGASFMSKRMMVEGTPIKFQIWDTAGQEKYKSLAPMYYKGAAAAIVVYDITKRNTFKTLQDWIRELQENGPEGIVIAVAGNKSDLCEgeanahLREVQSAEAEAYATEIGASFAETSAKTKANVNEIFEQISRNL 177
                 9*************************************************************************************************************************999*************************************9976 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.0   1.6e-25   9.8e-23       1     119 []      12     126 ..      12     126 .. 0.95

  Alignments for each domain:
  == domain 1    score: 80.7 bits;  conditional E-value: 1.6e-25
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                 kvv++Gd+gvGKssl+ ++++ ef+    +e ++g+  ++k + v++   ++++wd++g+e+ k+  ++  k a+a+++vyd+t++++++++    +w++el++ g + i++ + gnk D
  MMETSP1325-20131115|1877_1  12 KVVLLGDTGVGKSSLVLRFITNEFK--PYQESTIGASFMSKRMMVEGTPIKFQIWDTAGQEKYKSLAPMYYKGAAAAIVVYDITKRNTFKTL---QDWIRELQENGPEgIVIAVAGNKSD 126
                 8************************..889999****************************999987777*********************7...68999999999899*********98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.0   2.6e-18   1.6e-15      10     174 ..       6     176 ..       1     177 [. 0.87

  Alignments for each domain:
  == domain 1    score: 56.6 bits;  conditional E-value: 2.6e-18
                 -.TSEEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTT..ST.SSSEEEEEEBTTTTB--HHHHHHHHHH CS
  PF00025.16  10 lkkkelrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellglee..lkgkrkleiqkcsavkgeglkeglewlses 174
                 ++ +e++++llG  + GK+ ++ ++ ++e++  +  Tig  f ++++++    +kf++wD  Gqek ++l   Y++   a i v D ++r+ +++ ++ +++l +e+  + +++ v +NK Dl e   +++lre  + e     ++   + +++sa ++ +++e +e++s++
  MMETSP1325-20131115|1877_1   6 ERAREVKVVLLGDTGVGKSSLVLRFITNEFKPyQESTIGasFMSKRMMVegTPIKFQIWDTAGQEKYKSLAPMYYKGAAAAIVVYDITKRNTFKTLQDWIREL-QENGPEGIVIAVAGNKSDLCEGEANAHLREVQSAEAeaYATEIGASFAETSAKTKANVNEIFEQISRN 176
                 4589*************************9974567887335667766633679****************************************999999886.788899**********************99887766444468888999**************999876 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   2.1e-11   1.3e-08      47     187 ..      38     178 ..       8     179 .. 0.83

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 2.1e-11
                 CHHHH---BBSSEEEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-S-HHHHHHHHHHHHTT--....EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHHHSC CS
  PF00009.22  47 keerergiTiksaaisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqTeevlrlakklgvk....iivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaivellp 187
                  +e   g +  s+ + +e  +   ++++ Dt G +++ +      + + +a++v d ++  + +T + +    +++ +    i v+ NK D++e e++   +e+++   e y ++    ++++ +Sa+++ ++++++e+i ++lp
  MMETSP1325-20131115|1877_1  38 YQESTIGASFMSKRMMVE--GTPIKFQIWDTAGQEKYKSLAPMYYKGAAAAIVVYDITKRNTFKTLQDWIRELQENGPegivIAVAGNKSDLCEGEANAHLREVQSAEAEAYATEI--GASFAETSAKTKANVNEIFEQISRNLP 178
                 567777888888888888..****************************************999998887777777666685455677******************99988887775..69********************99988 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   1.4e-10   8.6e-08       1     158 [.      12     159 ..      12     177 .. 0.85

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 1.4e-10
   PF04670.7   1 klLLmGksgsGKtSmr.siiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspe.akvfvlihKmDlisedereeifeerkeeireeiedleieeleffaTS 158
                 k++L+G +g GK+S+    i +++ + +  ++ga+   ++  v+    +k+++wD+ Gqe++ +      +   ++   + i V Di+    +++++++q+ ++ l+++ pe + + v  +K Dl + +++ ++ e + +e +  + +++    +f +TS
  MMETSP1325-20131115|1877_1  12 KVVLLGDTGVGKSSLVlRFITNEFKPYQESTIGASFMSKRMMVE-GTPIKFQIWDTAGQEKYKSL-----APMYYKGAAAAIVVYDIT---KRNTFKTLQDWIRELQENGPEgIVIAVAGNKSDLCEGEANAHLREVQSAEAEAYATEIG---ASFAETS 159
                 89************853789999************977777775.677***********888776.....5899999999999*****...4789**************99747788999******988888888888888887777777...6677776 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0     9e-08   5.6e-05       1     108 [.      12     114 ..      12     176 .. 0.71

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 9e-08
                 EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSE.SE.EEE.ETTE...EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTS.HHHHHHHHHHHHHHTCCCE CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrdi.te.nev.kkek...iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasa.vlkeadkellneleakkpl 108
                 +v+++G + vGKS+L+ + +     + + y+  T       +++ ++++   ++++Dt+G        k    +k+      + a ++++v d+++ ++ ++ ++ ++el+++ p 
  MMETSP1325-20131115|1877_1  12 KVVLLGDTGVGKSSLVLRFIT---NEFKPYQESTIGAsFMsKRMmVEGTpikFQIWDTAGQE------K----YKSLAPMYyKGAAAAIVVYDITKrNTFKTLQDWIRELQENGPE 114
                 699************999984...355666666666632222223333244589******32......2....2333333348888889999954323323445555555544443 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   6.8e-06    0.0042       4     135 ..      11     138 ..       8     174 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 6.8e-06
                 -EEEEE--TT---HHHHHHHHHSS-------S.S-EEETT-...---..--EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHH.HHHHHHHHHHHHHH-----EEEEEE-TTSTT---HHHHHH CS
   PF09439.5   4 pavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekgk..kltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkev.AEllyeilliteklknavdiliACnKqelflakspklikd 135
                  +v+l+G +  GK sl  r  t+++k+ + S   +s+  k    +g+  k+++ D  G+ek ++ l     +k  + + + v D t  +++  ++  +++ e    +e+ ++++ i +A nK++l     +  +++
  MMETSP1325-20131115|1877_1  11 VKVVLLGDTGVGKSSLVLRFITNEFKPYQESTiGASFMSKRMMVEGTpiKFQIWDTAGQEKYKS-LAPM-YYK-GAAAAIVVYDIT--KRNTFKTlQDWIRE---LQENGPEGIVIAVAGNKSDLCEGEANAHLRE 138
                 5799***************************986666655545555422899********9876.4333.344.444555567744..44443330344333...234459999999999**99987766666655 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.2   1.2e-05    0.0077      25      49 ..      11      36 ..       2     201 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.2e-05
   PF13191.1 25 l.llvtGpsGiGKSsLlrelakpill 49
                + ++++G+ G+GKSsL+ +++++ ++
  MMETSP1325-20131115|1877_1 11 VkVVLLGDTGVGKSSLVLRFITNEFK 36
                3389*************998887665 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   2.5e-05     0.015      35      58 ..      10      33 ..       2      52 .. 0.81
   2 ?   -1.5   0.0       1.8   1.1e+03      10      34 ..     150     174 ..     140     178 .. 0.65

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.5e-05
                TSBEEEE-------HHHHHHH--- CS
  PF03193.11 35 dktsvlvGqSGvGKSsLinallpe 58
                +  +vl+G +GvGKSsL+ +++ +
  MMETSP1325-20131115|1877_1 10 EVKVVLLGDTGVGKSSLVLRFITN 33
                45689************9776655 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1.8
                 H---EEEEEECHHHTT-HHHHHHCT CS
  PF03193.11  10 klgyevlvlsvktkegleelaellk 34 
                 ++g ++  +s+ktk++++e+ e+++
  MMETSP1325-20131115|1877_1 150 EIGASFAETSAKTKANVNEIFEQIS 174
                 5666666777777777777666554 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   2.4e-05     0.015      15     123 ..       5     119 ..       1     121 [. 0.66
   2 ?   -1.1   0.0       1.8   1.1e+03      84     115 ..     153     175 ..     127     180 .. 0.54

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 2.4e-05
                 HHH..-SEEEEE--TT---HHHHHHHHHH-..---....HHHHH------HHHHHHHH.....HHHS-SHHHHHHHHT....-----.TS-GG.G--HHHHHHHHHH----.EEEE CS
  PF01637.13  15 lerepnsiiviyGprrsGKTaLlkeileelkekgk....rvvyyinlreefeskleefie.eeeekkklakalgialpkaeleeilk.kksklvflaleellealkkkgkk.iiii 123
                 +er ++  +v++G  ++GK++L+ +++ +  ++++     + +++++  ++   ++ f    +  ++k +  +    + a++  +    ++++ f++l++ +++l++ g + i+i+
  MMETSP1325-20131115|1877_1   5 AERAREVKVVLLGDTGVGKSSLVLRFITNEFKPYQestiGASFMSKRMMVEGTPIK-FQIwDTAGQEKYKSLAPMYYKGAAAAIVVYdITKRNTFKTLQDWIRELQENGPEgIVIA 119
                 5677777799***************9999844444455455566654444444444.42255555555555555555554443333357888899999999999999999976665 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 1.8
                 HHHT....-----TS-GG.G--HHHHHHHHHH CS
  PF01637.13  84 ialpkaeleeilkkksklvflaleellealkk 115
                  ++          ++s++ + +++e++e++++
  MMETSP1325-20131115|1877_1 153 ASFA---------ETSAKTKANVNEIFEQISR 175
                 2222.........4555556666666666655 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00024      0.15      22      61 ..      13      52 ..       7     108 .. 0.84
   2 ?    2.6   0.0     0.084        52      41     111 ..     105     177 ..      96     186 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00024
   PF06745.8 22 vlitGepGtGKtifalqFlikgaeeygepgvfvtveesae 61
                v + G++G GK+ ++l+F+ +  + y+e ++  ++ ++++
  MMETSP1325-20131115|1877_1 13 VVLLGDTGVGKSSLVLRFITNEFKPYQESTIGASFMSKRM 52
                6678************************999777766665 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.084
   PF06745.8  41 ikgaeeygepgvfvtveesaedlre.nakslgwdlekleeegklaiidasesaeeea.eedleelieklaeai 111
                 i+ ++e g +g+ ++v  +++dl e +a++   +++  e+e   + i as  ++  + +++++e+ e++ + +
  MMETSP1325-20131115|1877_1 105 IRELQENGPEGIVIAVAGNKSDLCEgEANAHLREVQSAEAEAYATEIGASFAETSAKtKANVNEIFEQISRNL 177
                 5667888999*******99999988245566678888888877777766655544445888888888887665 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00022      0.13       2      23 ..       9      30 ..       8      35 .. 0.87
   2 ?   -0.7   0.0       1.3   7.8e+02     115     152 ..     101     140 ..      97     176 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00022
   PF13479.1  2 kkikvliYGkpGiGKTslaktl 23
                + +kv+++G+ G+GK+sl+ ++
  MMETSP1325-20131115|1877_1  9 REVKVVLLGDTGVGKSSLVLRF 30
                579***************8765 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1.3
   PF13479.1 115 fsrlltkllsalgknvvftAhederkd...edggaytrfel 152
                 +++++++l++  g   +++A++ ++ d    + +a+ r  +
  MMETSP1325-20131115|1877_1 101 LQDWIRELQE-NGPEGIVIAVAGNKSDlceGEANAHLREVQ 140
                 6788888777.577778888888888876655565555554 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0037       2.3      52      78 ..       4      30 ..       1      41 [. 0.82
   2 ?    4.1   0.0     0.022        14     207     247 ..      38      80 ..      30      93 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0037
                XXXXXXEEEEEEEXXXXXXXHHHHHHH CS
  PF00503.15 52 kkkkkkevklLlLGqgeSGKsTilkqf 78
                k + ++evk++lLG ++ GKs ++  f
  MMETSP1325-20131115|1877_1  4 KAERAREVKVVLLGDTGVGKSSLVLRF 30
                556789***************998555 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.022
                 XXXXXXXXEEEEEXX....XXXEEEEEEXXXXGGGGGGTGGGXX CS
  PF00503.15 207 arlkttGiseikfeve...sktefrlvDvGGqrserkkWipcfe 247
                 ++  t+G s ++ ++    + ++f+++D++Gq  ++k+ +p++ 
  MMETSP1325-20131115|1877_1  38 YQESTIGASFMSKRMMvegTPIKFQIWDTAGQE-KYKSLAPMYY 80 
                 5667888888888888889899**********9.5788777764 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00011     0.068       5     111 ..      13     137 ..       9     147 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.00011
   PF13173.1   5 lvitGpRrvGKttllkqlakell..keesilyinlddeel............rkladpe....llelfleklke........kkkylflDEiqev...pewedalkslvddg.rnldviltGsnskllskeiatsla 111
                 +v+ G  +vGK+ l+ +++ +++   +es++  ++ +++             +     +     ++       +            ++   i++    ++++d++++l ++g + + + + G  s l   e + +l+
  MMETSP1325-20131115|1877_1  13 VVLLGDTGVGKSSLVLRFITNEFkpYQESTIGASFMSKRMmvegtpikfqiwD-----TagqeKYK-------SlapmyykgAAAAIVVYDITKRntfKTLQDWIRELQENGpEGIVIAVAGNKSDLCEGEANAHLR 137
                 7899999************9999998899999999999994444443322220.....01111112.......1332333334444888888887555778899999999994445666777777777667766665 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0    0.0003      0.19      55      77 ..      12      35 ..       3      43 .. 0.79
   2 ?   -0.5   0.0       0.7   4.3e+02     124     164 ..      97     137 ..      89     169 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0003
   PF05673.8 55 nvLLwGarGtGKSslv.kallney 77
                +v+L G+ G+GKSslv ++++ne+
  MMETSP1325-20131115|1877_1 12 KVVLLGDTGVGKSSLVlRFITNEF 35
                689***********9846666665 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.7
   PF05673.8 124 eyksLksvLeGsleakpenvliyatsNrRhLlpeklsdnee 164
                 ++k+L+ ++    e+ pe ++i ++ N+  L + + + + +
  MMETSP1325-20131115|1877_1  97 TFKTLQDWIRELQENGPEGIVIAVAGNKSDLCEGEANAHLR 137
                 56777777777778889999999999999988877666555 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00013     0.083       2      58 ..      13      71 ..      12     118 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00013
                EEEE-------HHHHHHHH.HH-...---EE-..-EEE-----------EEE--.---EE CS
  PF03266.10  2 vfiTGepgvGKtTlvkkvl.ellksegvkvgG..fyteevreggrrigfdivdlasgerg 58
                v++ G+ gvGK+ lv +++ ++ k  + +  G  f+ ++++ +g+ i f+i d   g+++
  MMETSP1325-20131115|1877_1 13 VVLLGDTGVGKSSLVLRFItNEFKPYQESTIGasFMSKRMMVEGTPIKFQIWDT-AGQEK 71
                7889**********9986625677655555554599*****************9.55554 PP

>> PF08741.5  YwhD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00015     0.092      61     129 ..      47     119 ..      39     136 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00015
   PF08741.5  61 fltdkeeveegkkyWlvWvtverkeeg....pyyaGvtacellvdkeirrgykslpehvnkldkslkrkiivd 129
                 f++++  ve++   + +W t  +++ +     yy G +a+ ++ d  +r ++k+l + +++l+    + i++ 
  MMETSP1325-20131115|1877_1  47 FMSKRMMVEGTPIKFQIWDTAGQEKYKslapMYYKGAAAAIVVYDITKRNTFKTLQDWIRELQENGPEGIVIA 119
                 66677777777777778888776654322226***************************99987766666665 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00026      0.16      25      40 ..      12      27 ..       3      30 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00026
   PF13555.1 25 ntlltGasGsGKSTll 40
                +++l G++G+GKS+l+
  MMETSP1325-20131115|1877_1 12 KVVLLGDTGVGKSSLV 27
                5899**********97 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00027      0.17       2      23 ..      13      34 ..      12     112 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00027
                EEEE------HHHHHHHGGGGB CS
   PF07728.9  2 vlLvGppGtgKselaerlaeal 23
                v+L+G++G+gKs+l+ r+    
  MMETSP1325-20131115|1877_1 13 VVLLGDTGVGKSSLVLRFITNE 34
                89*************9986555 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.14        89       2      17 ..      12      27 ..      11      36 .. 0.85
   2 ?    7.8   0.0    0.0024       1.5     126     173 ..     143     187 ..     116     209 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.14
                EEEEE--TT---HHHH CS
  PF02421.13  2 tvalvGnpnvGKttlf 17
                +v+l+G+  vGK++l+
  MMETSP1325-20131115|1877_1 12 KVVLLGDTGVGKSSLV 27
                799***********97 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0024
                 -HHHHHHH----EEEEBCCGTB--HHHHHHHHHHCTCG-XXX..XXX. CS
  PF02421.13 126 dlkkLselLgvpvvktvarkkkgieelleaiievaekeekekkllkys 173
                 ++++ ++++g    +t+a++k +++e++e+i +   + e++++   y+
  MMETSP1325-20131115|1877_1 143 EAEAYATEIGASFAETSAKTKANVNEIFEQISRNLPAYEPPQN---YQ 187
                 566677899**********************988877666554...33 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00061      0.38       7      57 ..      13     104 ..       9     202 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00061
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae..........................................karvvfveapastspkellqk 57 
                 +v+ G +GvGK+ l+ r+  +  + ++++                                            a +v +++++  + k+l  +
  MMETSP1325-20131115|1877_1  13 VVLLGDTGVGKSSLVLRFITNEFK-PYQEStigasfmskrmmvegtpikfqiwdtagqekykslapmyykgaAAAIVVYDITKRNTFKTLQDW 104
                 5899*********99998886432.22222466666665555555555555555555555555555555554444445555555555555555 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.026        16      28      52 ..       9      33 ..       1      42 [. 0.77
   2 ?    5.4   0.0    0.0098       6.1     174     228 ..     122     176 ..     103     205 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.026
                --EEE--B-------HHHHHH---H CS
  PF03308.11 28 ralvvGltGvPGaGkstlveklike 52
                r   v l G  G+Gks lv ++i++
  MMETSP1325-20131115|1877_1  9 REVKVVLLGDTGVGKSSLVLRFITN 33
                444567889**********999875 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0098
                 E----HHHHHHHHHHHHHHHHHS--S.BTTB--EEEE-BTTTTB--HHHHHHHHHH CS
  PF03308.11 174 vnkaDkeeaekaarelraaleleeek.ekeWrppvlktsavegeGidelvdaieeh 228
                  nk+D  e e+ +++lr +++ e e+  +e  +   +tsa+++  ++e++++i++ 
  MMETSP1325-20131115|1877_1 122 GNKSDLCEGEA-NAHLREVQSAEAEAyATEIGASFAETSAKTKANVNEIFEQISRN 176
                 49999666554.4456666666666657788899*******************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       599  (0.0438122); expected 273.4 (0.02)
Passed bias filter:                      513  (0.0375219); expected 273.4 (0.02)
Passed Vit filter:                        76  (0.00555881); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.70u 0.43s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 1047.82
//
Query:       MMETSP1325-20131115|1881_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 354.24
//
Query:       MMETSP1325-20131115|1883_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-06   27.6   0.2    0.00023   20.3   0.0    2.1  2  PF03942.10 DTW domain


Domain annotation for each model (and alignments):
>> PF03942.10  DTW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.7e-08   0.00023     116     148 ..       8      40 ..       2      46 .. 0.90
   2 !    5.6   0.0   0.00052       7.1     155     185 ..     109     140 ..      97     158 .. 0.74

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.7e-08
  PF03942.10 116 rlillDgTWkqarkilkkserlrelpqvslate 148
                  +i++DgTW qark+ ++ +  + +p++ l ++
  MMETSP1325-20131115|1883_1   8 DVIVIDGTWAQARKLHASLPTGAHVPRIRLSDS 40 
                 58**************************99876 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.00052
  PF03942.10 155 lrkqp.segalsTiEaaaqlLselesearave 185
                 lr+ p +++ ++T+Ea   lL++l + ++ v+
  MMETSP1325-20131115|1883_1 109 LRRHPiRWREVATLEATRLLLRDLDPLQERVR 140
                 6777735678**************99855544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 791.65
//
Query:       MMETSP1325-20131115|1886_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0049   16.1   0.0     0.0059   15.8   0.0    1.1  1  PF00809.17 Pterin binding enzyme


Domain annotation for each model (and alignments):
>> PF00809.17  Pterin binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.3e-07    0.0059      73     129 ..      13      66 ..       9      97 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4.3e-07
                 SEEEEE-SSHHHHHHHHHCSS-EEEEEEBS-HHHHHHHHHHH---EEEEE---...- CS
  PF00809.17  73 vpiSiDtfkaevaeaAlkagadiindvsglendeemaklaaeygaavVlmhmdgkpk 129
                 +p S D+++a+v+e Al+  a+++    +   + ++  + a ++ ++Vl hm+ + +
  MMETSP1325-20131115|1886_1  13 CPMSFDSVEAKVLELALEPLAKVVRIRRQ---NIHLSVVQAHHEMPLVLGHMQTSDC 66 
                 689*******************9988887...778888889************5443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 589.50
//
Query:       MMETSP1325-20131115|1887_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-25   87.6   0.0    4.8e-25   87.1   0.0    1.3  1  PF01588.15 Putative tRNA binding domain


Domain annotation for each model (and alignments):
>> PF01588.15  Putative tRNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.1   0.0   3.5e-29   4.8e-25       1      95 []      31     126 ..      31     126 .. 0.99

  Alignments for each domain:
  == domain 1    score: 87.1 bits;  conditional E-value: 3.5e-29
                 EEEEEEEEEEEETTSTTEEEEEEE----C.EEEEE-ETTTS-HCCCTT-EEEEETSSESEE----EE-SEB-EEETE-S--EEEEEESSS-----B CS
  PF01588.15   1 lrvGkvleaekhpnadkLlvlkvdvGeee.rqivsgaknvyapeelvaklvvvvanlkpkklrGveSeGMilsaeeleeeevellelpeeveaGek 95 
                 +rvG+ +e+ +hp++ kL+++k+  G+ e r+++sg++++ + e++ +k v v +nlkp+k+  ++S+GM+l+a+++++++ve++++p++v++G++
  MMETSP1325-20131115|1887_1  31 IRVGELVEVWNHPKSTKLFCEKISCGDDEpREVCSGLRDHFTLEQMKNKRVLVCCNLKPAKMADFVSNGMVLCAKSADGKTVEFIDPPADVPLGTR 126
                 79********************************************************************************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 999.24
//
Query:       MMETSP1325-20131115|1888_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-12   45.7   0.8    1.8e-10   40.3   0.6    2.0  1  PF12315.3  Protein of unknown function (DUF3633)
  ------ inclusion threshold ------
       0.01   15.3   0.0      0.025   14.1   0.0    1.6  2  PF10263.4  SprT-like family
      0.025   13.9   0.1      0.048   12.9   0.0    1.4  2  PF00487.19 Fatty acid desaturase
        0.1   12.1   0.0       0.12   11.9   0.0    1.2  1  PF14247.1  Domain of unknown function (DUF4344)
       0.11   12.4   0.0       0.15   12.0   0.0    1.4  1  PF13485.1  Peptidase MA superfamily


Domain annotation for each model (and alignments):
>> PF12315.3  Protein of unknown function (DUF3633)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.6   6.7e-14   1.8e-10      70     143 ..      23      97 ..       4     140 .. 0.81

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 6.7e-14
   PF12315.3  70 pqkltrrcevtailvlyGLPrlltGsiLAHElmHawlRLkGyrn.LepevEEGiCqvlahlWlesellasssass 143
                 +++  r++ v+ i  l  LPrl  G+ LAHEl Ha++ Lk +++ +++e  EG+C + a+l+l  +  ++s + +
  MMETSP1325-20131115|1888_1  23 EKTTDRTAAVNLIGALVALPRLQLGATLAHELCHAFFTLKRFPKgMREERVEGLCELWAYLFLVHKQRHGSFEEK 97 
                 445556677999999999***********************8755999999************977777665333 PP

>> PF10263.4  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   9.3e-06     0.025      43      73 ..      30      59 ..       5      72 .. 0.70
   2 ?   -1.3   0.0      0.49   1.3e+03      71     100 ..      79     108 ..      75     131 .. 0.62

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 9.3e-06
   PF10263.4 43 asIeLseklldsrseerlletLlHEmiHlal 73
                a ++L   l++  ++ +l  tL+HE++H+ +
  MMETSP1325-20131115|1888_1 30 AAVNLIGALVAL-PRLQLGATLAHELCHAFF 59
                566666666666.7778999********986 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.49
   PF10263.4  71 lalfvisngrrnpHga.eFkawaekineala 100
                 l+++++  ++++ Hg  e k+ aek  + l+
  MMETSP1325-20131115|1888_1  79 LWAYLF-LVHKQRHGSfEEKQEAEKYAKLLK 108
                 566666.667788887666666666666544 PP

>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.8e-05     0.048       4      36 ..      31      63 ..      28      71 .. 0.84
   2 ?   -2.6   0.0      0.96   2.6e+03      18      38 ..      80     100 ..      74     107 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.8e-05
  PF00487.19  4 lllllalllaalllsilvnlaHealHgalfrsr 36
                ++ l+++l+a+ +l+ ++ laHe++H  ++ +r
  MMETSP1325-20131115|1888_1 31 AVNLIGALVALPRLQLGATLAHELCHAFFTLKR 63
                5678899********************666655 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.96
  PF00487.19  18 silvnlaHealHgalfrsrrl 38 
                 ++ ++l+H   Hg++  ++ +
  MMETSP1325-20131115|1888_1  80 WAYLFLVHKQRHGSFEEKQEA 100
                 455667777777777766655 PP

>> PF14247.1  Domain of unknown function (DUF4344)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.3e-05      0.12      93     123 ..      47      76 ..      24     132 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.3e-05
   PF14247.1  93 lhtllHElgHalidllelpilGkEEDaaDql 123
                  +tl HEl Ha+++l++ p   +EE  +  l
  MMETSP1325-20131115|1888_1  47 GATLAHELCHAFFTLKRFPKGMREE-RVEGL 76 
                 579****************866665.44444 PP

>> PF13485.1  Peptidase MA superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.4e-05      0.15       3      40 ..      20      61 ..      18     120 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.4e-05
   PF13485.1  3 ggvaipgsslivlev..tpgdrdwlr..rvlaHEltHlvlga 40
                ggv++++++++ ++   +     +l+  ++laHEl H+++  
  MMETSP1325-20131115|1888_1 20 GGVEKTTDRTAAVNLigALVALPRLQlgATLAHELCHAFFTL 61
                6777777777776543333333334444**********9864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.65
# Mc/sec: 523.51
//
Query:       MMETSP1325-20131115|1890_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-41  138.7   0.1    7.5e-41  138.7   0.1    1.7  2  PF01798.13 Putative snoRNA binding domain
  ------ inclusion threshold ------
       0.61    9.5  40.5       0.88    9.0  28.0    1.3  1  PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
       0.77    9.3  12.3          1    8.9   8.5    1.2  1  PF11800.3  Replication protein C C-terminal region
       0.83    9.4  13.6       0.97    9.2   9.4    1.2  1  PF06217.7  GAGA binding protein-like family
        1.1    8.0   3.3        1.1    8.0   2.3    1.1  1  PF02535.17 ZIP Zinc transporter
        1.9    8.4   3.7        3.6    7.5   2.6    1.5  1  PF04145.10 Ctr copper transporter family
        3.3    6.7  24.8        4.9    6.1  17.2    1.3  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)
        4.7    6.9  23.2        6.8    6.3  16.1    1.3  1  PF06459.7  Ryanodine Receptor TM 4-6
        9.5    4.6   8.7         11    4.3   6.0    1.1  1  PF02455.11 Hexon-associated protein (IIIa)


Domain annotation for each model (and alignments):
>> PF01798.13  Putative snoRNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.7   0.1   4.9e-44   7.5e-41      45     149 ..       2     105 ..       1     106 [. 0.98
   2 ?   -2.1   0.1       1.2   1.9e+03      20      20 ..     131     131 ..     109     164 .. 0.59

  Alignments for each domain:
  == domain 1    score: 138.7 bits;  conditional E-value: 4.9e-44
                 HHHHH---HHHHHT--HHHHTT----------------------GGGSHHHHTS-SS----HHHHHHHHHHHHHHHHHH-----TH.....HHHHHHHHHHH--- CS
  PF01798.13  45 rLishaGsleeLaklpastiqvlGaekalfralktkaktpkyGliyqseliqkapkkvkgkiaRllaaKlalAarvDalseesdesvlgkelreelekrleklee 149
                 rLis+aGsl +Lak+past+q+lGaekalfralk+k +tpkyGliy+s++i++a++k+kg+i+R+la+K+a+A+r+D++ ee+++ ++g++lr ++e+rle +e+
  MMETSP1325-20131115|1890_1   2 RLISKAGSLVSLAKCPASTVQILGAEKALFRALKKKGNTPKYGLIYHSTFIGRAATKNKGRISRYLANKCAIASRIDSFIEEPTT-KYGESLRSQVEERLEFYES 105
                 9************************************************************************************.5**************9875 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.2
                 H CS
  PF01798.13  20 e 20 
                 e
  MMETSP1325-20131115|1890_1 131 E 131
                 2 PP

>> PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  28.0   0.00058      0.88     132     198 ..     127     191 ..      92     192 .. 0.58

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00058
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........XXXXXXXXX CS
   PF08208.6 132 elgseseesekektakkekeaeveeeekkekkkkkevkkekkekKsKkektekekkkskkkkkkkkK 198
                 +++ e+ e++kek+ k++ + e+   +kk+kk kke++ e++ kK+Kk+    ek+++k+kkkkkkK
  MMETSP1325-20131115|1890_1 127 REELEKGETKKEKKSKRKADDEEGAAKKKKKKAKKEAEAEEPPKKKKKKD--GEKEEKKEKKKKKKK 191
                 23333344444444444444444444555555555555556666666655..455555555555555 PP

>> PF11800.3  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   8.5   0.00066         1      22      99 ..     112     189 ..      91     194 .] 0.67

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00066
   PF11800.3  22 tlaeLeelldeleelreevenlleerek..teessanesqnerhiqnsnpessselepssekkqgakasvseesedraep 99 
                 +++ ++++++el+++ree+e+   ++ek  + + + +e   ++++++ ++e   e++p+++kk++ +++  e++e+++++
  MMETSP1325-20131115|1890_1 112 NIDVMSAVAKELAAAREELEKGETKKEKksKRKADDEEGAAKKKKKKAKKEAEAEEPPKKKKKKDGEKE--EKKEKKKKK 189
                 566789999***********9999888833444555555566666667777666676775555554444..333333333 PP

>> PF06217.7  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   9.4   0.00064      0.97     105     190 ..     112     187 ..      47     194 .] 0.40

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00064
   PF06217.7 105 sihslqmlkh..pqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekk 190
                 +i+ +  + +     +++ ++  +++ek+++ +  +++  ak+             k+kkakk+ + +e +kkk+kk++++e++k++kk
  MMETSP1325-20131115|1890_1 112 NIDVMSAVAKelAAAREELEKgETKKEKKSKRKADDEEGAAKK-------------KKKKAKKEAEAEEPPKKKKKKDGEKEEKKEKKK 187
                 3333333222221111111111122222222222222111111.............111111111111222222222222222222211 PP

>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.3   0.00071       1.1     109     168 ..     131     190 ..      43     194 .] 0.68

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00071
  PF02535.17 109 shgegrghdkehsettsdeaskskeskvenaeseeeeteeeesdhdheskeksesdkese 168
                 + ge+++++k++ +++++e +++k++k++ +e e ee  ++++++d e++ek+e++k+++
  MMETSP1325-20131115|1890_1 131 EKGETKKEKKSKRKADDEEGAAKKKKKKAKKEAEAEEPPKKKKKKDGEKEEKKEKKKKKK 190
                 334555555555555555555555555666666666666666666666665555555544 PP

>> PF04145.10  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   2.6    0.0024       3.6      36      86 ..     115     175 ..     113     192 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0024
  PF04145.10  36 llavlyegLkavrrklerklakrasrnskavksasrsaeaekskaeksak..........s 86 
                 +++++++ L a+r++le+   k++++++++  +++++a+++k+ka+k+a+          +
  MMETSP1325-20131115|1890_1 115 VMSAVAKELAAAREELEKGETKKEKKSKRKADDEEGAAKKKKKKAKKEAEaeeppkkkkkK 175
                 5788899999********9999999999999999988888888887777666655554440 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  17.2    0.0032       4.9     234     301 ..     121     191 ..      75     192 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0032
                 .XXXXXXX.....X..XXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXX------- CS
   PF09468.5 234 vdFaplekylaela..sdlskkreaeedaeaaesra..ekkrkkeeeekkkkakeskgvkalkkvnasGmkk 301
                  ++a+++++l++ +  +++++kr+a +d e a +++  + k++ e ee+ kk+k++ g+k++kk  ++++kk
  MMETSP1325-20131115|1890_1 121 KELAAAREELEKGEtkKEKKSKRKA-DDEEGAAKKKkkKAKKEAEAEEPPKKKKKKDGEKEEKKEKKKKKKK 191
                 4666666666665565333344433.3333333333224555555577888888888889888887777776 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  16.1    0.0044       6.8      80     145 ..     121     187 ..      75     193 .. 0.59

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0044
   PF06459.7  80 peeaaaekkelkeeeeepkseaekadledgek.eekaeeeseekpeeakaakkkaekkkekkaekee 145
                 +e aaa+++ +k e++++k+   kad e+g + ++k+++++e+++ee+ ++kkk+  +ke+k+ek++
  MMETSP1325-20131115|1890_1 121 KELAAAREELEKGETKKEKKSKRKADDEEGAAkKKKKKAKKEAEAEEPPKKKKKKDGEKEEKKEKKK 187
                 2223333333344444444444555555554436666777777777777777666666666655544 PP

>> PF02455.11  Hexon-associated protein (IIIa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   6.0    0.0076        11     367     461 ..      82     186 ..      52     193 .. 0.52

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0076
  PF02455.11 367 pepsvaepss.apslsessevlrsald........grlaesrlpgeedllapaaeknasnneleelvdklsrwktyaqelreleaseaksr.rprieeae.eeeed 461
                  ep+++  +s +++++e  e  +s           +++a++ + + e+l + +++k ++ ++ +++ + +++ k +++ ++e+ea+e+ ++ +++ +e+e ++e++
  MMETSP1325-20131115|1890_1  82 EEPTTKYGESlRSQVEERLEFYESGKApkknidvmSAVAKELAAAREELEKGETKKEKKSKRKADDEEGAAK-KKKKKAKKEAEAEEPPKKkKKKDGEKEeKKEKK 186
                 444444444444455444444333333544555656666666666666777666666555555555565555.555556666666644444044444433222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2080  (0.152136); expected 273.4 (0.02)
Passed bias filter:                      712  (0.0520772); expected 273.4 (0.02)
Passed Vit filter:                       213  (0.0155793); expected 13.7 (0.001)
Passed Fwd filter:                        49  (0.00358397); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.93u 0.41s 00:00:01.34 Elapsed: 00:00:00.92
# Mc/sec: 505.32
//
Query:       MMETSP1325-20131115|1892_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 590.73
//
Query:       MMETSP1325-20131115|1884_1  [L=514]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-46  156.8   0.1    3.1e-45  154.0   0.2    2.1  2  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
    2.2e-28   97.9   0.0    6.4e-28   96.5   0.0    1.8  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase
    9.4e-15   53.9   5.2      2e-09   36.8   0.0    2.4  2  PF13414.1  TPR repeat
    8.4e-09   34.5   0.1    0.00039   19.7   0.0    2.5  2  PF00515.23 Tetratricopeptide repeat
    8.9e-09   34.5   0.0     0.0045   16.6   0.0    2.9  2  PF07719.12 Tetratricopeptide repeat
    3.8e-06   26.1   0.1      0.088   12.5   0.0    2.7  2  PF13181.1  Tetratricopeptide repeat
    0.00012   22.5   0.6    0.00084   19.8   0.0    2.2  2  PF13432.1  Tetratricopeptide repeat
     0.0013   18.8   0.1          3    8.3   0.0    3.0  2  PF13174.1  Tetratricopeptide repeat
     0.0028   17.3   0.0     0.0083   15.8   0.0    1.8  2  PF13371.1  Tetratricopeptide repeat
     0.0042   17.4   0.3       0.25   11.9   0.0    3.0  3  PF13428.1  Tetratricopeptide repeat
     0.0056   16.4   0.1      0.016   15.0   0.0    1.8  1  PF13424.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.069   13.2   0.0        1.3    9.3   0.0    2.8  3  PF13431.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0       0.7   7.9e+02     101     135 ..     206     238 ..     146     274 .. 0.80
   2 !  154.0   0.2   2.7e-48   3.1e-45       1     154 [.     322     485 ..     322     486 .. 0.86

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.7
  PF00160.16 101 ngsqFfItlgdaphlDgkytvFGkVv.egmdvveki 135
                 n  q +I+l+  ++ D    + GkV  +  d v+++
  MMETSP1325-20131115|1884_1 206 NAAQCYINLK--NWTDA-ISCAGKVLeKDGDNVKAL 238
                 6789999996..69999.999999994334555555 PP

  == domain 2    score: 154.0 bits;  conditional E-value: 2.7e-48
  PF00160.16   1 lvdietss..kGrivieLfedkaPktvenFlklakeg...........fYdgtkfhrvikgfmiqgGdpsgkgangeek.kaggesipdEikkkklkhkr.GalamartgpepnsngsqFfItlgdaphlDgkytvFGkVvegmdvvekieavetde..kpeknvkiksvg 154
                 ++die+++   G+iv+eLf+d++Pkt+enF+ l++ g           +Y+g++fhrvik+fmiqgGd++  +   +++    ge+++dE+  +k kh++  +l+ma+ g  p +ngsqFfIt +++phlDgk++vFG+V+eg  +v+++e+ve+++  +p ++ +i ++g
  MMETSP1325-20131115|1884_1 322 FFDIEIGGepTGKIVMELFADTVPKTAENFRALCT-GekgmgnsgnplHYKGSTFHRVIKDFMIQGGDFTRGDG--TGGeSIYGEKFADEN--FKIKHTEgMLLSMANAG--PGTNGSQFFITSRETPHLDGKHVVFGRVIEGEATVRAVENVEKGAsdAPAHACVIADCG 485
                 57899987888***********************7.335677888999********************887755..32223444469****..57888662678***997..7***************************************887778899999*****98 PP

>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.5   0.0   5.6e-31   6.4e-28       4      94 .]      43     133 ..      40     133 .. 0.96

  Alignments for each domain:
  == domain 1    score: 96.5 bits;  conditional E-value: 5.6e-31
                 ---CT-EEEEEEEEEE..---EEEETTTTTCEEEEECCTTSS-HHHHHHHTTSBCTEEEEEEEEGGGT-S-TTCCTTTS.TT-EEEEEEEEE CS
  PF00254.23   4 kakegdtVtvhyegkle.dgtvfdssysrakpfefkvGsgqvikgleeglegmkvGekrtltippelaYgekglaggkippnatlvfevell 94 
                 ++ +g  V+ hy+g+le dg++fdss++r+k+f+fk+G gqvi++++ g+  mkvGek+ l++ +++aYg++g  ++kip +atl+f+vel+
  MMETSP1325-20131115|1884_1  43 SPPNGYNVRAHYTGTLEsDGSKFDSSRDRGKEFKFKIGVGQVIRAWDLGFASMKVGEKAILKCRSDYAYGDNGS-PPKIPGGATLLFDVELI 133
                 5778999**********9********************************************************.88*************97 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   1.4   3.4e-09   3.8e-06       1      67 [.     152     230 ..     152     231 .. 0.84
   2 !   36.8   0.0   1.7e-12     2e-09       6      69 .]     204     266 ..     201     266 .. 0.97

  Alignments for each domain:
  == domain 1    score: 26.3 bits;  conditional E-value: 3.4e-09
   PF13414.1   1 enAealkelGnalfkegdydeAieayekAleld.....pnnae........lyynlAlaylklgkdyeeAledyekAlel 67 
                 e+A ++k+ G a f+++ ++ A+++ye A  +        +ae        ++ n A++y++l  ++ +A+ ++ k+le 
  MMETSP1325-20131115|1884_1 152 ETAAKYKADGTAEFTKKSWALAVAKYEDAAGYVddmleGADAEaalplftsCLGNAAQCYINLK-NWTDAISCAGKVLEK 230
                 6899**************************975223223355567777777************7.789*********986 PP

  == domain 2    score: 36.8 bits;  conditional E-value: 1.7e-12
   PF13414.1   6 lkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                 l ++++++++++++ +Ai +  k le d +n +++y+++la  ++g   +eA  d+  A +ldP
  MMETSP1325-20131115|1884_1 204 LGNAAQCYINLKNWTDAISCAGKVLEKDGDNVKALYRRGLARSRMG-LLDEAKSDLMTAFKLDP 266
                 5689******************************************.99**************9 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   7.6e-05     0.087       4      34 .]     204     234 ..     202     234 .. 0.90
   2 !   19.7   0.0   3.4e-07   0.00039       1      34 []     235     268 ..     235     268 .. 0.97

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 7.6e-05
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   4 lynlGnaylklgkydeAleyyekALelnPnn 34 
                 l n +++y +l+++ +A+ +  k+Le + +n
  MMETSP1325-20131115|1884_1 204 LGNAAQCYINLKNWTDAISCAGKVLEKDGDN 234
                 67889*********************98776 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 3.4e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALelnPnn 34 
                 +kaly++G+a  ++g +deA  +   A +l+P+n
  MMETSP1325-20131115|1884_1 235 VKALYRRGLARSRMGLLDEAKSDLMTAFKLDPEN 268
                 58******************************97 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.5e-05     0.017       4      34 .]     204     234 ..     202     234 .. 0.91
   2 !   16.6   0.0     4e-06    0.0045       2      34 .]     236     268 ..     235     268 .. 0.97

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                 l n +++y++l+++ +A+ +  k+le d +n
  MMETSP1325-20131115|1884_1 204 LGNAAQCYINLKNWTDAISCAGKVLEKDGDN 234
                 6689**********************99876 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 4e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 +aly++Gla  ++g ++eA+ ++  A +ldP+n
  MMETSP1325-20131115|1884_1 236 KALYRRGLARSRMGLLDEAKSDLMTAFKLDPEN 268
                 79*****************************97 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00025      0.28       6      32 ..     206     232 ..     201     234 .. 0.88
   2 !   12.5   0.0   7.7e-05     0.088       2      33 ..     236     268 ..     235     269 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00025
                 T---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   6 nlGdiYrqlGdydkAkeylekalelkp 32 
                 n +++Y +l+++  A+++  k+le + 
  MMETSP1325-20131115|1884_1 206 NAAQCYINLKNWTDAISCAGKVLEKDG 232
                 889********************9876 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 7.7e-05
                 --TTT---HHHHTT-HHHHHHHHH---HHHH.. CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelkp.r 33 
                 ka+y++G++   +G  d+Ak+ l+ a +l+p +
  MMETSP1325-20131115|1884_1 236 KALYRRGLARSRMGLLDEAKSDLMTAFKLDPeN 268
                 79*****************************66 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.2       1.2   1.3e+03      42      62 ..     172     192 ..     162     199 .. 0.64
   2 !   19.8   0.0   7.3e-07   0.00084       7      63 ..     211     267 ..     206     268 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 1.2
   PF13432.1  42 lrlgrldeAaallraalalaP 62 
                 l+  ++++Aa + + +l++a+
  MMETSP1325-20131115|1884_1 172 LAVAKYEDAAGYVDDMLEGAD 192
                 344456666666666664444 PP

  == domain 2    score: 19.8 bits;  conditional E-value: 7.3e-07
   PF13432.1   7 llraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAa.allraalalaPd 63 
                 +++++++ +A+ +  ++l+++ +++ al++++ a  r+g ldeA   l  a+ +l+P 
  MMETSP1325-20131115|1884_1 211 YINLKNWTDAISCAGKVLEKDGDNVKALYRRGLARSRMGLLDEAKsDLMTAF-KLDPE 267
                 7899****************************************99998888.88885 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0027         3       5      29 ..     206     230 ..     206     234 .. 0.90
   2 !    7.4   0.1    0.0053         6       2      23 ..     237     258 ..     236     268 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0027
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealerlike 29 
                 ++a++y++l+++++A+    +++++
  MMETSP1325-20131115|1884_1 206 NAAQCYINLKNWTDAISCAGKVLEK 230
                 689*****99**********99997 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0053
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   2 AlyklalsyyklgdtdeAleal 23 
                 Aly+++l++ ++g  deA+  l
  MMETSP1325-20131115|1884_1 237 ALYRRGLARSRMGLLDEAKSDL 258
                 9**********99*****9755 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.8   4.3e+03       2      22 ..     168     188 ..     168     191 .. 0.86
   2 !   15.8   0.0   7.3e-06    0.0083       3      62 ..     209     268 ..     207     279 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 3.8
   PF13371.1   2 kaiylreedferALavverll 22 
                 k+++l   ++e A  +v+ +l
  MMETSP1325-20131115|1884_1 168 KSWALAVAKYEDAAGYVDDML 188
                 789999999999999999877 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 7.3e-06
   PF13371.1   3 aiylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpda 62 
                 + y++ + +  A+ ++  +l+ + d +  ++ rGl++ ++g l +A  dL ++ +l+p+ 
  MMETSP1325-20131115|1884_1 209 QCYINLKNWTDAISCAGKVLEKDGDNVKALYRRGLARSRMGLLDEAKSDLMTAFKLDPEN 268
                 78**************************************************99999953 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.2       7.1   8.1e+03      14      29 ..     174     189 ..     169     199 .. 0.59
   2 !   11.9   0.0   0.00022      0.25       6      42 ..     206     242 ..     201     246 .. 0.84
   3 !    6.9   0.0    0.0091        10       2      40 ..     236     274 ..     235     278 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 7.1
   PF13428.1  14 lGdpdeAiallrrala 29 
                    +++A+ + +++l+
  MMETSP1325-20131115|1884_1 174 VAKYEDAAGYVDDMLE 189
                 4556777777777665 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00022
   PF13428.1   6 alarallalGdpdeAiallrralalaPddaealllLa 42 
                   a+ +++l ++ +Ai ++ ++l+++ d+  al++ +
  MMETSP1325-20131115|1884_1 206 NAAQCYINLKNWTDAISCAGKVLEKDGDNVKALYRRG 242
                 67999************************87765543 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0091
   PF13428.1   2 eallalarallalGdpdeAiallrralalaPddaealll 40 
                 +al++++ a  ++G +deA   l  a +l+P++  +  +
  MMETSP1325-20131115|1884_1 236 KALYRRGLARSRMGLLDEAKSDLMTAFKLDPENKPVKVE 274
                 699*****************************9776655 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.4e-05     0.016       5      75 ..     201     264 ..     197     267 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.4e-05
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                  ++l n a+++  l+++ +A+++  k+le        ++d ++al+  + +  ++g +deA+  l  A ++
  MMETSP1325-20131115|1884_1 201 TSCLGNAAQCYINLKNWTDAISCAGKVLEK-------DGDNVKALYRRGLARSRMGLLDEAKSDLMTAFKL 264
                 68999******************9999944.......4455899999999999999999999877666665 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.2   1.4e+03      18      33 ..     206     221 ..     198     222 .. 0.83
   2 ?    9.3   0.0    0.0011       1.3       4      33 ..     226     255 ..     223     256 .. 0.93
   3 ?   -2.3   0.0       5.5   6.3e+03       4      14 ..     260     270 ..     257     289 .. 0.73

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 1.2
   PF13431.1  18 nLAelllnnGdleeAe 33 
                 n A+++ n++++ +A+
  MMETSP1325-20131115|1884_1 206 NAAQCYINLKNWTDAI 221
                 6799999*****9997 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0011
   PF13431.1   4 kaleldPnnadaynnLAelllnnGdleeAe 33 
                 k le+d +n+ a+++++++ ++ G l+eA+
  MMETSP1325-20131115|1884_1 226 KVLEKDGDNVKALYRRGLARSRMGLLDEAK 255
                 789*********************999996 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 5.5
   PF13431.1   4 kaleldPnnad 14 
                  a +ldP+n +
  MMETSP1325-20131115|1884_1 260 TAFKLDPENKP 270
                 57889999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.89u 0.33s 00:00:01.22 Elapsed: 00:00:00.57
# Mc/sec: 2123.67
//
Query:       MMETSP1325-20131115|1894_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-05   22.7   0.0    5.7e-05   22.1   0.0    1.2  1  PF03016.10 Exostosin family


Domain annotation for each model (and alignments):
>> PF03016.10  Exostosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   4.2e-09   5.7e-05     226     264 ..      10      48 ..       4      58 .. 0.92

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 4.2e-09
  PF03016.10 226 spenymellkssrFClvppGdtptsrrlfdallagCiPV 264
                 ++++y + l s+ F+lvp+G +p + r  +a + g+iPV
  MMETSP1325-20131115|1894_1  10 DRQTYLQALLSAVFALVPAGNNPETFRHWEAFALGAIPV 48 
                 5678**********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.63
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|1895_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-13   50.4   0.0      5e-13   48.8   0.0    1.8  2  PF13884.1  Chaperone of endosialidase
  ------ inclusion threshold ------
       0.12   12.4   2.0       0.23   11.4   1.4    1.5  1  PF00700.16 Bacterial flagellin C-terminal helical region


Domain annotation for each model (and alignments):
>> PF13884.1  Chaperone of endosialidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   7.3e-17     5e-13       1      58 []      35      92 ..      35      92 .. 0.88
   2 ?   -2.1   0.0      0.59     4e+03       9      23 ..     158     173 ..     152     174 .. 0.67

  Alignments for each domain:
  == domain 1    score: 48.8 bits;  conditional E-value: 7.3e-17
   PF13884.1  1 SDrrlKtnIrel.eda.lakvlklrpvtYrykdesirkskdsgrreyGfIAQeveavlpe 58
                SD+r Kt+++++ +++ la++l+++pvtYr++ +   +  d+   ++Gf+AQ+v + lpe
  MMETSP1325-20131115|1895_1 35 SDARWKTDVADVsTNTsLAAILAMKPVTYRWNAD--APHSDKSSVDLGFLAQQVRDSLPE 92
                9***********76668**************974..55557778999********99997 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.59
   PF13884.1   9 Irel.edalakvlklr 23 
                 +r l  + la++++l+
  MMETSP1325-20131115|1895_1 158 LRQLvNAQLARIEQLE 173
                 5566444599999986 PP

>> PF00700.16  Bacterial flagellin C-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.4   3.4e-05      0.23      16      80 ..     106     171 ..      96     176 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.4e-05
  PF00700.16  16 sqlGavqnRlesaie.nlknqsenlkaaisriedvDpaeestrltklqillqasyallaqanqlpq 80 
                 + +G++ +++++  + +l+ q+ +l+a+  ried+  a+  ++ + +   +++ + + aq+ +++q
  MMETSP1325-20131115|1895_1 106 GHIGLAYSKITAMLTgALQEQQVLLSAQHARIEDAELANRRQQAAHIRDVAELRQLVNAQLARIEQ 171
                 67999999999886637********************98877766665555555544444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       690  (0.0504681); expected 273.4 (0.02)
Passed bias filter:                      493  (0.0360591); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.61
# Mc/sec: 769.98
//
Query:       MMETSP1325-20131115|1896_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.2   1.4       0.21   10.8   0.9    1.2  1  PF13398.1 Peptidase M50B-like


Domain annotation for each model (and alignments):
>> PF13398.1  Peptidase M50B-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.9   1.6e-05      0.21      61     100 ..      30      69 ..      23      86 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.6e-05
   PF13398.1  61 kgglgqiltllaGYlgpallglllillaasgrarlllilg 100
                  g ++  +t+ +G++gp+l+   ++l+aasg+ +++  l+
  MMETSP1325-20131115|1896_1  30 GGVIQPSITITGGPPGPSLVAGPFALAAASGKLSVVCPLL 69 
                 56677889**********************9998754432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 603.88
//
Query:       MMETSP1325-20131115|1893_1  [L=534]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-05   23.7   0.2     0.0014   18.5   0.0    2.7  3  PF13394.1  4Fe-4S single cluster domain
    0.00016   21.7   0.1     0.0024   17.8   0.0    2.3  2  PF13353.1  4Fe-4S single cluster domain
  ------ inclusion threshold ------
       0.01   15.9   0.0      0.038   14.0   0.0    1.9  1  PF04055.16 Radical SAM superfamily


Domain annotation for each model (and alignments):
>> PF13394.1  4Fe-4S single cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.68   3.1e+03      53      76 ..      66      83 ..      50     101 .. 0.70
   2 !   18.5   0.0   3.1e-07    0.0014       6      68 ..     121     182 ..     118     198 .. 0.75
   3 ?    2.0   0.0     0.041   1.9e+02      62     104 ..     218     257 ..     214     270 .. 0.72

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.68
   PF13394.1 53 tGGEPllqlneeallelikalkee 76
                 GG+P+      +l++ + +++e+
  MMETSP1325-20131115|1893_1 66 KGGDPM------KLIDTVAEIREQ 83
                599999......344444555444 PP

  == domain 2    score: 18.5 bits;  conditional E-value: 3.1e-07
   PF13394.1   6 agCnlkCkgCdtkstwdfnggkpftaealaeiie.lkekkikpqgvvltGGEPllqlneealle 68 
                 + C+  C++C++ +++  + +  f++++ a  +e l+e+k+  + v +tGG+P+     + l +
  MMETSP1325-20131115|1893_1 121 QTCHAYCTYCFRWAQFIGDDELRFAQKEAAGFFEyLDEHKE-ISDVLMTGGDPMVMRT-NSLKQ 182
                 67**********66555588888999999999997444444.466*********6544.33444 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.041
   PF13394.1  62 neeallelikalkeegpekeialetngtlelelgkdwkelkev 104
                 ++++++el+++++eeg + +ia+    + e+el+   +++k +
  MMETSP1325-20131115|1893_1 218 DADECIELLRRVREEG-KRHIAIMAHLSHEVELST--EKVKAA 257
                 67889**********9.888888887777766663..334443 PP

>> PF13353.1  4Fe-4S single cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   5.3e-07    0.0024      12      69 ..     120     178 ..     107     189 .. 0.82
   2 ?    1.0   0.0      0.08   3.6e+02      69     108 ..     219     258 ..     214     270 .. 0.72

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 5.3e-07
   PF13353.1  12 vsGCnlkCkgCfnketwdfkkgkkftkelleeiiedlkn.ekiegltllGGEPllpena 69 
                  + C+  C +Cf  +    + + +f +++ + ++e+l++ ++i+++ ++GG+P++++ +
  MMETSP1325-20131115|1893_1 120 AQTCHAYCTYCFRWAQFIGDDELRFAQKEAAGFFEYLDEhKEISDVLMTGGDPMVMRTN 178
                 578*********77777777888889***********9538889**********96544 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.08
   PF13353.1  69 aeallellkrvkeelpektiwlytGytleellkeeteell 108
                 a++++ell+rv+ee+  +  ++   +   el++e+++  +
  MMETSP1325-20131115|1893_1 219 ADECIELLRRVREEGKRHIAIMAHLSHEVELSTEKVKAAI 258
                 68899**********9777776666666677666555444 PP

>> PF04055.16  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   8.3e-06     0.038       6      83 ..     122     241 ..     119     285 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 8.3e-06
                 EESS--TT-CCCTCHHHHHHHHHHHHHHHHHHHHHH.TCS-CEEEEE---SGGGT............................................TTHHHHHHHHHHCHEECCEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx............................................xxxxxxxxxxxxxxxxxxxxxxxx RF
  PF04055.16   6 gCnlrCsfCanpetsregrgrsrsveeileevkelk.eekgvkevtltGgeplly............................................pdfvellerlaklalpgirialet 83 
                  C+  C++C ++     g+ + r  ++ ++ + e+  e+k +  v +tGg+p++                                             ++++ell+r +++   + +ia+ +
  MMETSP1325-20131115|1893_1 122 TCHAYCTYCFRWAQ-FIGDDELRFAQKEAAGFFEYLdEHKEISDVLMTGGDPMVMrtnslkqylepftdpeflphirnlrigtrsltfwpqrfttdkdaDECIELLRRVREE--GKRHIAIMA 241
                 7***********97.66666666666666666666546666*************9999999999888887777777777777777777777777777777777777777777..566666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      432  (0.0315974); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.92u 0.39s 00:00:01.31 Elapsed: 00:00:00.72
# Mc/sec: 1777.30
//
Query:       MMETSP1325-20131115|1880_1  [L=420]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.73u 0.32s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 2287.43
//
Query:       MMETSP1325-20131115|1898_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0098   15.9   0.1      0.018   15.1   0.1    1.4  1  PF13964.1  Kelch motif
  ------ inclusion threshold ------
      0.013   15.1   0.3      0.024   14.2   0.0    1.6  2  PF13418.1  Galactose oxidase, central domain
      0.023   14.7   0.0       0.04   13.9   0.0    1.5  1  PF13415.1  Galactose oxidase, central domain
      0.025   14.0   0.2      0.047   13.1   0.1    1.4  1  PF01344.20 Kelch motif
       0.07   12.6   0.2      0.095   12.1   0.1    1.1  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   6.4e-06     0.018      25      44 ..      12      31 ..       5      35 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.4e-06
   PF13964.1 25 kylndvlvydpetksWeqlp 44
                + lnd++ y+pe ++W+q++
  MMETSP1325-20131115|1898_1 12 SKLNDLWMYSPELNRWSQVS 31
                558***************97 PP

>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   8.7e-06     0.024      26      46 ..      12      32 ..       4      36 .. 0.86
   2 ?   -3.4   0.0       2.9   7.9e+03       4       8 ..      44      48 ..      43      49 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 8.7e-06
   PF13418.1 26 gplnDlyvfDlstntWtrlps 46
                + lnDl+ ++++ n+W++++s
  MMETSP1325-20131115|1898_1 12 SKLNDLWMYSPELNRWSQVSS 32
                679***************965 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 2.9
   PF13418.1  4 ghsav 8 
                +h++v
  MMETSP1325-20131115|1898_1 44 YHTSV 48
                99998 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.5e-05      0.04      16      46 ..      12      47 ..       5      49 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.5e-05
   PF13415.1 16 trlndvyvldldtntweei.....gslPppRaghta 46
                  lnd+++++++ n w ++         ++  +ht+
  MMETSP1325-20131115|1898_1 12 SKLNDLWMYSPELNRWSQVssdgcMAGETGLIYHTS 47
                569**************9954322223557777765 PP

>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   1.7e-05     0.047      27      45 ..      14      32 ..      10      33 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.7e-05
                TTEEEEEETTTTEEEEECC CS
  PF01344.20 27 lnsVerYDpvtntWeklps 45
                ln+ ++Y+p+ n W++++s
  MMETSP1325-20131115|1898_1 14 LNDLWMYSPELNRWSQVSS 32
                8**************9986 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   3.5e-05     0.095      43      68 ..      52      77 ..      43      80 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.5e-05
   PF04156.9 43 ivliAlgvvLlalgllllllkapvqs 68
                ++l+ ++++L+++gl++++ ++++ s
  MMETSP1325-20131115|1898_1 52 MTLLLVMSALFSAGLIFCSHRHQKGS 77
                789999***************99866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 535.66
//
Query:       MMETSP1325-20131115|1897_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-09   37.6   1.3    2.3e-09   36.9   0.9    1.4  1  PF06127.6 Protein of unknown function (DUF962)


Domain annotation for each model (and alignments):
>> PF06127.6  Protein of unknown function (DUF962)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.9   1.6e-13   2.3e-09       3      50 ..      35      92 ..      34     113 .. 0.81

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 1.6e-13
   PF06127.6  3 sleefyafYlaeHsnptnrllHfigvplilllvvllllrak..........lklllal 50
                +++e++afY+a H++p+n+l+Hfi++p+i +++++ l++ +          +   +++
  MMETSP1325-20131115|1897_1 35 DFREQLAFYGAFHQDPINQLIHFIFIPVIWWTALTWLCYVPivkvgghqlsWGACMLT 92
                699***********************************99966666655544333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.31s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 615.53
//
Query:       MMETSP1325-20131115|1900_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-21   75.4   0.7    1.7e-21   75.2   0.5    1.1  1  PF12554.3  Mitotic-spindle organizing gamma-tubulin ring associated
     0.0084   15.9   0.0     0.0096   15.7   0.0    1.2  1  PF04023.9  FeoA domain
  ------ inclusion threshold ------
      0.046   13.1   0.0      0.052   13.0   0.0    1.1  1  PF12926.2  Mitotic-spindle organizing gamma-tubulin ring associated
        0.1   11.0   0.0        0.1   11.0   0.0    1.1  1  PF02119.11 Flagellar P-ring protein


Domain annotation for each model (and alignments):
>> PF12554.3  Mitotic-spindle organizing gamma-tubulin ring associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.5   5.1e-25   1.7e-21       2      48 .]      10      56 ..       9      56 .. 0.97

  Alignments for each domain:
  == domain 1    score: 75.2 bits;  conditional E-value: 5.1e-25
   PF12554.3  2 eelldilheiSdlLntgLdreaLsicieLleaGVnPeaLAevvkelr 48
                +e+ld+lheiS lLntgLd+++Lsi+++L+e GVnP aL +vv+elr
  MMETSP1325-20131115|1900_1 10 AEALDVLHEISGLLNTGLDKNSLSILVQLCEMGVNPGALIHVVQELR 56
                799******************************************98 PP

>> PF04023.9  FeoA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.8e-06    0.0096      22      44 ..      32      54 ..      10      62 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.8e-06
                CSHHHHHHHTT-----EEEEEE. CS
   PF04023.9 22 pellrrLsemGlspGqrvevvaq 44
                  +l +L emG++pG+ + vv++
  MMETSP1325-20131115|1900_1 32 LSILVQLCEMGVNPGALIHVVQE 54
                456789***************74 PP

>> PF12926.2  Mitotic-spindle organizing gamma-tubulin ring associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.5e-05     0.052      30      70 ..      16      56 ..       6      70 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.5e-05
   PF12926.2 30 LfeLtqaAGvtidqeVFkilvdLlklnvaPlavfqvLkslc 70
                L e+  +    +d++   ilv+L  + v P a++ v ++l 
  MMETSP1325-20131115|1900_1 16 LHEISGLLNTGLDKNSLSILVQLCEMGVNPGALIHVVQELR 56
                555555555678999999**************998887764 PP

>> PF02119.11  Flagellar P-ring protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     3e-05       0.1     303     338 ..      30      64 ..       6      68 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3e-05
  PF02119.11 303 aslaelvkalnalgvtprdliaILqalkaaGaLqae 338
                  sl+ lv +l ++gv+p  li ++q+l+++Ga +ae
  MMETSP1325-20131115|1900_1  30 NSLSILV-QLCEMGVNPGALIHVVQELRREGASRAE 64 
                 4555555.5799********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 361.90
//
Query:       MMETSP1325-20131115|1902_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.035   13.7   0.0      0.041   13.5   0.0    1.2  1  PF01418.12 Helix-turn-helix domain, rpiR family


Domain annotation for each model (and alignments):
>> PF01418.12  Helix-turn-helix domain, rpiR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     3e-06     0.041      36      57 ..      21      42 ..       9      47 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3e-06
                -HHHHHHHTT--HHHHHHHHHH CS
  PF01418.12 36 siaelAkaagvSeasvvrfakk 57
                + ++lAkaa+v++a v r+++k
  MMETSP1325-20131115|1902_1 21 GHHKLAKAASVGRAKVGRLTRK 42
                5578****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 344.48
//
Query:       MMETSP1325-20131115|1903_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.078   11.7   0.0      0.078   11.7   0.0    1.0  1  PF06460.7 Coronavirus NSP13


Domain annotation for each model (and alignments):
>> PF06460.7  Coronavirus NSP13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.7e-06     0.078     177     208 ..      22      53 ..       2      69 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5.7e-06
   PF06460.7 177 keLyelvqkfsfwtvfctsvnassseafligi 208
                 +    lvq+++  ++f tsv + sse   ig 
  MMETSP1325-20131115|1903_1  22 IPAPALVQQCTLANIFRTSVATTSSELRFIGT 53 
                 555679********************988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|1905_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-35  121.5   0.0      4e-35  121.2   0.0    1.1  1  PF00481.16 Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.0   2.9e-39     4e-35     130     256 ..       8     155 ..       2     156 .. 0.90

  Alignments for each domain:
  == domain 1    score: 121.2 bits;  conditional E-value: 2.9e-39
                 --EEEESS---STTSHHHHHHHHH----EE-T--EE---BSBSB----HHHC---ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHHHHHHHHHHHHHHHT........................HHHHHTS-SSHHHHH.HHHHHH CS
  PF00481.16 130 dnakkeltedHkpsnedEreRIeeaggsvsngngRvngsLavsRalGdfelkpkekeqlvsaePdvtsvkideedefliLasDGlwdvlsdqeavdlvrselskkk........................spmeaaeelvdeaia.rgsedn 256
                 ++++  +++d +++++dE++RI +agg++s  n+Rvng+LavsRa+Gd+++k   +++lv +eP+vt+++ +++def+iLa+DGlwdvls+++av  vr++l  +                         ++ ++ ++lv++ai+ +gs+dn
  MMETSP1325-20131115|1905_1   8 GGTARDVSFDCRADRPDEVARIVDAGGFMS--NKRVNGQLAVSRAMGDVDYKT--RQKLVCPEPEVTETRVQDDDEFFILACDGLWDVLSSDDAVKYVRERLRPHVpvssipvgaesnpgsdeiglgdsaDLAQVVKDLVTHAIEeKGSTDN 155
                 334469************************..********************9..789*******************************************997669999999999999999999999999999999999999862567777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 922.08
//
Query:       MMETSP1325-20131115|1904_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 901.24
//
Query:       MMETSP1325-20131115|1906_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1145.46
//
Query:       MMETSP1325-20131115|1908_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 318.06
//
Query:       MMETSP1325-20131115|1909_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.5   0.2       0.26   11.5   0.0    1.5  2  PF12223.3 Protein of unknown function (DUF3602)


Domain annotation for each model (and alignments):
>> PF12223.3  Protein of unknown function (DUF3602)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.74     1e+04      51      60 ..      18      26 ..      13      39 .. 0.57
   2 ?   11.5   0.0   1.9e-05      0.26      29      42 ..      96     109 ..      82     112 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 0.74
   PF12223.3 51 Reaqdvdeel 60
                R+  dv+ + 
  MMETSP1325-20131115|1909_1 18 RRSADVS-SS 26
                5555555.22 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 1.9e-05
   PF12223.3  29 skvstGRGGaGNmr 42 
                 s++ +GRGG GN++
  MMETSP1325-20131115|1909_1  96 SDFFSGRGGLGNTA 109
                 5599********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 565.18
//
Query:       MMETSP1325-20131115|1901_1  [L=488]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0053   16.5   0.5     0.0053   16.5   0.3    2.8  2  PF01485.16 IBR domain
  ------ inclusion threshold ------
      0.015   14.6   0.1      0.041   13.2   0.0    1.8  2  PF10842.3  Protein of unknown function (DUF2642)
        0.1   12.2   0.7       0.43   10.2   0.1    2.0  2  PF07652.9  Flavivirus DEAD domain
       0.18   11.4  15.4      0.068   12.8   3.6    3.2  3  PF13639.1  Ring finger domain


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.5   5.2         4   1.4e+04      46      56 ..     302     312 ..     263     335 .. 0.64
   2 !   16.5   0.3   1.5e-06    0.0053      15      50 ..     390     420 ..     358     423 .. 0.80

  Alignments for each domain:
  == domain 1    score: -5.5 bits;  conditional E-value: 4
  PF01485.16  46 CgfefCflCkk 56 
                   +efC  C  
  MMETSP1325-20131115|1901_1 302 EAHEFCKACVG 312
                 34666666643 PP

  == domain 2    score: 16.5 bits;  conditional E-value: 1.5e-06
  PF01485.16  15 ekelkwCprpdCeaiiekekgakkssvtCskCgfef 50 
                 + +++ Cp+  C  ii    g+++  ++C+ Cg +f
  MMETSP1325-20131115|1901_1 390 RSNVRVCPS--CRVIIYRFAGCDH--MRCR-CGVSF 420
                 445579*88..*************..****.**988 PP

>> PF10842.3  Protein of unknown function (DUF2642)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05     0.041      35      66 .]     110     143 ..     107     143 .. 0.84
   2 ?   -3.4   0.0       1.8   6.1e+03      44      54 ..     179     189 ..     178     190 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.2e-05
   PF10842.3  35 GrLkdvkPDHlvieaeeavf..yiRiqqivsvlp 66 
                 G + +++PDH+v +++++ +   +R+q iv+++p
  MMETSP1325-20131115|1901_1 110 GPVCEIMPDHVVATSAKSQCrsSVRTQAIVTLVP 143
                 78899********9996665338*******9987 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 1.8
   PF10842.3  44 Hlvieaeeavf 54 
                 Hlvi+a++ v+
  MMETSP1325-20131115|1901_1 179 HLVITAAQVVM 189
                 99999888775 PP

>> PF07652.9  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.35   1.2e+03      62     101 ..     126     165 ..     112     168 .. 0.78
   2 ?   10.2   0.1   0.00013      0.43      33      95 ..     176     238 ..     170     244 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.35
                 ------------SEEEEEHHHHHHHHH--------SEEEE CS
   PF07652.9  62 tsavkeektgrelvdvmchatftkrllspvrkknyeliim 101
                 +s ++++  ++++v+++  a +    ++++ +    + +m
  MMETSP1325-20131115|1901_1 126 KSQCRSSVRTQAIVTLVPNASYELYAIEGTSMSSQMVHVM 165
                 4555677788999999999999999999998888888887 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00013
                 T--EEEEESSHHHHHHHHHHT----EEE-------------SEEEEEHHHHHHHHH------- CS
   PF07652.9  33 rlrtlvLaPtrvvlaemeealkglevryktsavkeektgrelvdvmchatftkrllspvrkkn 95 
                 + r lv++ ++vv+   + al+ l+ r++ + +k +++  +++ v   a + + ll  v   n
  MMETSP1325-20131115|1901_1 176 QRRHLVITAAQVVMLPAATALRRLQHRFRARYTKMRSNAADIIIVWYRAHYYSWLLRRVDAAN 238
                 56899*****************************************99999999888776655 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   3.6     2e-05     0.068       3      43 ..     277     331 ..     275     334 .. 0.75
   2 ?    4.9   0.1    0.0056        19      32      44 ..     387     400 ..     385     402 .. 0.82
   3 ?   -2.9   0.1       1.5   5.3e+03      21      27 ..     409     415 ..     405     428 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2e-05
   PF13639.1   3 CaiCldelsegeevvrlpC........gHvfHeeCldewlrssn.......sCPlC 43 
                 C iCl++++ + ++v+++          H f++ C+ +++ ss        +CP  
  MMETSP1325-20131115|1901_1 277 CQICLEDVQ-RCKFVTMHKqaqgqdgeAHEFCKACVGSFIDSSIddgrlhiQCPAY 331
                 ********6.678888864356666667************87634455666***75 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0056
   PF13639.1  32 ewlrss.nsCPlCr 44 
                 +w rs+ + CP Cr
  MMETSP1325-20131115|1901_1 387 AWARSNvRVCPSCR 400
                 69998867*****9 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 1.5
   PF13639.1  21 CgHvfHe 27 
                 C H+ ++
  MMETSP1325-20131115|1901_1 409 CDHMRCR 415
                 5555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.34s 00:00:01.18 Elapsed: 00:00:00.57
# Mc/sec: 2016.25
//
Query:       MMETSP1325-20131115|1907_1  [L=1221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   12.3   0.0         12    5.8   0.0    2.5  2  PF01476.15 LysM domain


Domain annotation for each model (and alignments):
>> PF01476.15  LysM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0    0.0037        51      12      30 ..     247     269 ..     240     270 .. 0.83
   2 ?    5.8   0.0   0.00085        12      16      38 ..     465     487 ..     460     489 .. 0.92

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0037
                 HHHHT....TS-IIIIIITS-TT CS
  PF01476.15  12 IAsry....glseqeltelNeel 30 
                 +A ++    gls +e+t+lN+++
  MMETSP1325-20131115|1907_1 247 LAEAFvlspGLSANEFTQLNPHI 269
                 456668888***********997 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.00085
                 TTS-IIIIIITS-TT---.---- CS
  PF01476.15  16 yglseqeltelNeeldsprlavG 38 
                 y ++++e+++ N+e + +++ +G
  MMETSP1325-20131115|1907_1 465 YRTQWDEFLRINPECSACGIVPG 487
                 789*****************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       502  (0.0367174); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.63u 0.36s 00:00:01.98 Elapsed: 00:00:00.77
# Mc/sec: 3799.94
//
Query:       MMETSP1325-20131115|1899_1  [L=593]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-14   54.3   1.3    1.5e-14   54.3   0.9    1.8  2  PF13519.1  von Willebrand factor type A domain
    3.5e-14   52.6   0.0    9.4e-14   51.2   0.0    1.7  1  PF04811.10 Sec23/Sec24 trunk domain
    0.00035   20.2   0.1      0.073   12.6   0.0    2.7  2  PF00092.23 von Willebrand factor type A domain
  ------ inclusion threshold ------
      0.031   13.3   7.2      0.052   12.5   5.0    1.3  1  PF01690.12 Potato leaf roll virus readthrough protein
       0.11   11.9   0.0       0.21   11.0   0.0    1.4  1  PF04810.10 Sec23/Sec24 zinc finger
        3.5    7.5   5.0         10    5.9   3.5    1.8  1  PF10138.4  Tellurium resistance protein


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.3     3e+03     117     153 ..      56     114 ..      34     129 .. 0.50
   2 !   54.3   0.9   6.8e-18   1.5e-14       2     166 ..     271     526 ..     270     535 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1.3
   PF13519.1 117 e....aasalkragikiyvvgvgsdega..................eallkelaeatgg 153
                 +    +a+ ++ +  ++ ++g+g++ ++                  e +  + a+ t++
  MMETSP1325-20131115|1899_1  56 QaaegRANRASGSSFNLSFFGFGGNRNGgsggrgggsgrsrrgsasERTASRRAKSTDA 114
                 23334555666666778888888776655555666666555555553344444444444 PP

  == domain 2    score: 54.3 bits;  conditional E-value: 6.8e-18
   PF13519.1   2 lvlvlDvSgSMnaedv......................................sptrldaakaalkdlldel.....pgdrvglvafsgsa..........elva.......................pltsdraalkaalnsldprlmpgggtnlaaalalalellakadgrraaivlvtDGedn............ssdie....aas........alkragikiyvvgvgsdegaeallkelaeatggryfdassdaeele 166
                 +v+v+D+SgSM  +                                         ++r++a++aa+++ ++e+     ++ +vgl++fs+++           +v+                       ++++++aal +a+ +l+     +g t+l+ a+a al ++ +a+ ++a ivl tDG +n            +   +    aa+        ++ +ag  + v+++ +++++ ++l +++eatgg++ ++  ++ +l+
  MMETSP1325-20131115|1899_1 271 VVFVVDTSGSMCVTSEvpgnvtlkgdrrnvnnqlrrqhggdndqylpgqrrdvtYVSRMQAVQAAINAQIEEMandksKKTKVGLITFSNEVtihgdgtgqpMTVSgdrlndmqaclasgqeararmglDVSESAAALSEAVFKLEE----SGPTALGPAVAVALGMVGGANAAGARIVLCTDGLANvglgsldeipegA---NpmreAAEsfyrglgdSAVAAGTVVDVISIIGQDADLENLGAVSEATGGTVTRV--NPIDLQ 526
                 79*********5553346667777888888999999999999999999999887799**************9854433444********7643333333333222222222233333333333333333788888888888888884....7********************************7776665554453331...1222233366666665999***********9999999**************999..454554 PP

>> PF04811.10  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0   4.1e-17   9.4e-14      20     223 ..     327     520 ..     322     534 .. 0.84

  Alignments for each domain:
  == domain 1    score: 51.2 bits;  conditional E-value: 4.1e-17
                 HHHHHHHHHHHHHCCTS-..TTTT-EEEEEEESSSEEEEE-STCSSS-EEEEEHHTTCHH......-TTSCCCSEECCCCHHHHHHHHHHHHHCTTT-..---------HHHHHHHHHT..T.S-EEEEEEE-S------.--S-SSTTS-CCCHHTT.-TTHHCHCHHHHHHHHHHCCCT-EEEEEEE-SC---CTTCHHHHHCC---EEEE CS
  PF04811.10  20 gelkalkeslkqsLdllP..eepralvglitfdsvvhffelkselrqpkelvvsdlqdvf......lpladrlLvplseseavledlLeelpemfavtagkrperalgpalkaavellkave.tggkiivfagslptvgaggklksredeslldidkekaklvkkadkfYkkLakecvkqgisvDlFlfsldyvdlaelkqlaeltgGqvvly 223
                 + ++a+  ++   ++++   ++++++vglitf + v ++  +    qp  ++ + l+d+       + +  r+ +++ses a l ++  +l+e           +algpa+ +a++++++++ +g++i++ + +l++vg+ g l         +i + ++ + ++a++fY  L++ +v+ g++vD+  +  +  dl +l+ ++e tgG+v   
  MMETSP1325-20131115|1899_1 327 SRMQAVQAAINAQIEEMAndKSKKTKVGLITFSNEVTIHGDGT--GQPMTVSGDRLNDMQaclasgQEARARMGLDVSESAAALSEAVFKLEES--------GPTALGPAVAVALGMVGGANaAGARIVLCTDGLANVGL-GSL--------DEIPEGANPMREAAESFYRGLGDSAVAAGTVVDVISIIGQDADLENLGAVSEATGGTVTRV 520
                 567888999999999999544899***************7555..7888888888999887777755566889999999999888887777654........4566****************99****************.544........445555678889999******************************************9765 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.2     0.013        29       2      12 ..     271     281 ..     271     284 .. 0.95
   2 !   12.6   0.0   3.2e-05     0.073      17     118 ..     329     455 ..     322     520 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.013
                 EEEEEE-STTS CS
  PF00092.23   2 ivfvlDgSgSi 12 
                 +vfv+D+SgS+
  MMETSP1325-20131115|1899_1 271 VVFVVDTSGSM 281
                 8*********9 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 3.2e-05
                 HHHHHHHHHHHHH.HH.CCTTTEEEEEEEESSSEE...............................EEE-TCCHHCCSSCGGHH-CCGGSTTS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE-----C-- CS
  PF00092.23  17 fekvkefikklie.kldigpdsvrvglvqyssdak...............................tevslndfkskeellsavsknlkylgggtntgkALkyalenlfssaagsrenapkvvillTDGksndg 118
                 +++v+ +i+  ie + ++  +++ vgl+++s++++                                 + l+ ++s  +l++av   +   +g t++g A   al ++        + a   ++l TDG +n g
  MMETSP1325-20131115|1899_1 329 MQAVQAAINAQIEeMANDKSKKTKVGLITFSNEVTihgdgtgqpmtvsgdrlndmqaclasgqearARMGLDVSESAAALSEAV--FKLEESGPTALGPAVAVALGMVGGA-----NAAGARIVLCTDGLANVG 455
                 56788888888885667******************8888877777777777777666666666666666666666666666666..4444457777777777777774444.....556666777788777665 PP

>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   5.0   2.3e-05     0.052       5      44 ..     128     168 ..     125     182 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
  PF01690.12   5 pgPkPgPsPtPpppPqPtPePtPa.kkerFiaYvGtpstki 44 
                 + P+P P P+P p+P+P+P+ +Pa  ++r+   v t +++i
  MMETSP1325-20131115|1899_1 128 AAPSPPPPPAPAPAPAPAPASAPArSRRRYHRKVDTNIMNI 168
                 56888888888888999999999966777777666666666 PP

>> PF04810.10  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   9.3e-05      0.21       4      36 ..     189     224 ..     185     227 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 9.3e-05
  PF04810.10   4 rCrrCraylNPfcqf...deggkrWtCnlCgtrNel 36 
                  C +C + l+  +++   d ++  W+C +Cg  ++l
  MMETSP1325-20131115|1899_1 189 SCGACASALSTLTKVggdDSDNYEWKCEFCGAEQVL 224
                 57777777777777744444999*******987765 PP

>> PF10138.4  Tellurium resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   3.5    0.0045        10       2      26 ..     128     152 ..     127     170 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0045
   PF10138.4   2 aapapapapaaapapapvpaaakvs 26 
                 aap+p+p+pa+apapap+pa+a+++
  MMETSP1325-20131115|1899_1 128 AAPSPPPPPAPAPAPAPAPASAPAR 152
                 6788999999999999988887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       656  (0.0479813); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.00u 0.37s 00:00:01.37 Elapsed: 00:00:00.68
# Mc/sec: 2089.76
//
Query:       MMETSP1325-20131115|1911_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.4    9.1   6.8        1.7    8.8   4.7    1.1  1  PF03229.8 Alphavirus glycoprotein J


Domain annotation for each model (and alignments):
>> PF03229.8  Alphavirus glycoprotein J
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   4.7   0.00012       1.7      21     110 ..       1      86 [.       1      89 [. 0.77

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00012
   PF03229.8  21 pkaalatgttatvgaana.aavanatganatsaaaastiaatvgapptdstvaaetPgpflptdfalPlviGGlcaltlaamGaGallrrc 110
                 p aa+at + a+vg  ++  av++a g+     + ++t +a+ ++p + s   ++ P    p+d    +v  G   l l a+   all r+
  MMETSP1325-20131115|1911_1   1 PAAAVATAAPAAVGEIATgVAVTTAVGEVLDGDTGTATNTAVLSSPGEGSNXVQGRP--LDPSD---CVVTQGALVLQLHALKDEALLIRR 86 
                 689****999999987664788899998888888999999*9****99996666655..34444...467777777888888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|1910_1  [L=829]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-14   53.4   0.1    1.7e-12   47.0   0.0    2.6  2  PF00150.13 Cellulase (glycosyl hydrolase family 5)
    0.00044   19.5   0.2    0.00071   18.9   0.1    1.2  1  PF01301.14 Glycosyl hydrolases family 35


Domain annotation for each model (and alignments):
>> PF00150.13  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.0   0.0   2.5e-16   1.7e-12      22     133 ..     218     396 ..     196     409 .. 0.76
   2 !    3.5   0.0    0.0044        30     235     280 ..     645     700 ..     556     701 .. 0.79

  Alignments for each domain:
  == domain 1    score: 47.0 bits;  conditional E-value: 2.5e-16
                 SHHHHHHHHHHH--SEEEEEEEHGGGG-STTTTC--HHHHHHHHHHHHHHHTTT-EEEEEEEES...........SSS..........G.-S-CCCTHHHHHHH...........................................................HHHHHHHHHHHCTT-TTBEEEESSSS--T CS
  PF00150.13  22 ttkalidevkdagfntvRlpvswgelvennpdykvdenslerveevvkyakenglyvildiHse...........egw..........ltkadgnssedtaeef...........................................................fkklwtqiAerykkndevvifelmNEPhg 133
                  +++ ++ ++++g +++R+ v+w+   +++p++ +d +++e + +vv  a e g+ v++d+H++           +gw          + +                                                                        + +++  iA+  k++++vv+f+++NEP+ 
  MMETSP1325-20131115|1910_1 218 EADEHLSRLRAWGLTFLRFLVTWEAVEHAGPGL-YDMEYVEYLVAVVRKAHEYGIVVFIDPHQDvwsrwtggdgcPGWvmekvgfnltALE------------AsgaavthqahgdplpkmiwgsnnwrlatatmftlffagdeyapktmidgkpvqqflqdtYISAMMVIANAMKDEPNVVGFDTLNEPNH 396
                 5667788999*************7777767776.******************************997777777775565555554443222............1223333334455666666666666777777778888888888888888888888888887778999********************98 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.0044
                 TTSEEEEEEE--B.-TT-H.........CHHHHHHHHHHHHHTCT-EEEESESSSS CS
  PF00150.13 235 kgipviigEfGgs.nadgd.........lakeeaekwldylkekgiswiyWslnpk 280
                 +g+p +igE+G   + dg+         ++ ++ ++++++++   +s+++W+++p+
  MMETSP1325-20131115|1910_1 645 RGVPTLIGETGIPfDLDGKkgfrtndlsTHVTALDNVMQAMDYALVSFTLWNYTPQ 700
                 689********977444446555555556666667779999999********9886 PP

>> PF01301.14  Glycosyl hydrolases family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1     1e-07   0.00071      27     105 ..     220     300 ..     213     307 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1e-07
  PF01301.14  27 edrlkkakalGlnaietYveWnlhepe.egqydfegeldlvkFiklaqeaglyvilRpGpYicAEwdaG.GlPaWLlkkke 105
                 +++l++++a Gl  +++ v W ++e + +g yd+e    lv+ ++ a+e g+ v++ p   + + w  G G P+W ++k +
  MMETSP1325-20131115|1910_1 220 DEHLSRLRAWGLTFLRFLVTWEAVEHAgPGLYDMEYVEYLVAVVRKAHEYGIVVFIDPHQDVWSRWTGGdGCPGWVMEKVG 300
                 6899******************999764899*************************************99*****999855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (829 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.21u 0.37s 00:00:01.58 Elapsed: 00:00:00.75
# Mc/sec: 2648.77
//
Query:       MMETSP1325-20131115|1913_1  [L=435]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.1    8.7   9.0        2.3    7.7   6.2    1.6  1  PF02439.10 Adenovirus E3 region protein CR2


Domain annotation for each model (and alignments):
>> PF02439.10  Adenovirus E3 region protein CR2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   6.2   0.00017       2.3       6      29 ..      16      39 ..      11      40 .. 0.92

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00017
  PF02439.10  6 iaIivaVvvGlaiIiicmlyYaCc 29
                ++I  aV+vGl +++++ ++Y C+
  MMETSP1325-20131115|1913_1 16 VTILIAVTVGLFVVFFVWFVYGCY 39
                99*********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       620  (0.0453482); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.37s 00:00:01.14 Elapsed: 00:00:00.59
# Mc/sec: 1766.81
//
Query:       MMETSP1325-20131115|1917_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.6e-38  130.3   0.0    6.2e-38  130.1   0.0    1.0  1  PF11931.3 Domain of unknown function (DUF3449)
  ------ inclusion threshold ------
      0.021   14.1   0.7      0.034   13.4   0.5    1.3  1  PF06397.7 Desulfoferrodoxin, N-terminal domain
       0.07   13.1   2.1        0.1   12.6   1.5    1.1  1  PF03693.9 Uncharacterised protein family (UPF0156)
        1.4    8.8   3.7        1.3    9.0   0.1    2.1  2  PF09943.4 Uncharacterized protein conserved in archaea (DUF2175)


Domain annotation for each model (and alignments):
>> PF11931.3  Domain of unknown function (DUF3449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.1   0.0   1.8e-41   6.2e-38       2     120 ..       2     116 .]       1     116 [] 0.88

  Alignments for each domain:
  == domain 1    score: 130.1 bits;  conditional E-value: 1.8e-41
   PF11931.3   2 kaeykieklaellskelektienverkqalteeerekeeelekeassksesseeeseeeseeeseeeeekkiynplnlpLgadgkPiPyWLyklhgLdkeykCEiCgntsYkGrkaFek 120
                 k+e+++  lae +++ +++t++ ve++q++ +eer++  e+e  ++++    +++ +e++eee++ee++ ++ynplnlpLg+dgkPiPyWLyklhgL++eykCEiCgn+sY+Gr+aF++
  MMETSP1325-20131115|1917_1   2 KTEARVAFLAEQMADVVDATKRYVEKRQTQLVEERDA--EIE--EEETGALAAMDADETEEEEADEEDDGPLYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGNMSYWGRRAFDR 116
                 67899999****************************9..333..3344445555666777788899999************************************************86 PP

>> PF06397.7  Desulfoferrodoxin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5     1e-05     0.034       7      15 ..      98     106 ..      95     107 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1e-05
                 EE-S----E CS
   PF06397.7   7 YkCevCGni 15 
                 YkCe+CGn+
  MMETSP1325-20131115|1917_1  98 YKCEICGNM 106
                 ********5 PP

>> PF03693.9  Uncharacterised protein family (UPF0156)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.5   2.9e-05       0.1      30      75 ..      15      60 ..      12      65 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.9e-05
   PF03693.9 30 seviRsaLRLLEeqEtklkalrealiegeesGesepfdldafleer 75
                ++v+ ++ R +E++ t+l   r+a ie ee G    +d d+  ee 
  MMETSP1325-20131115|1917_1 15 ADVVDATKRYVEKRQTQLVEERDAEIEEEETGALAAMDADETEEEE 60
                699************************************9977665 PP

>> PF09943.4  Uncharacterized protein conserved in archaea (DUF2175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.3      0.11   3.8e+02      75      95 ..      13      33 ..       2      63 .. 0.66
   2 ?    9.0   0.1   0.00038       1.3       2      16 ..      97     111 ..      96     114 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.11
   PF09943.4 75 eikkvirqkrkelEklaaklt 95
                ++++v++ +++ +Ek   +l 
  MMETSP1325-20131115|1917_1 13 QMADVVDATKRYVEKRQTQLV 33
                555555555555555554443 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00038
   PF09943.4   2 kwkCvvCgkeiiege 16 
                 ++kC +Cg+  ++g 
  MMETSP1325-20131115|1917_1  97 EYKCEICGNMSYWGR 111
                 8***********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       983  (0.0718988); expected 273.4 (0.02)
Passed bias filter:                      775  (0.0566852); expected 273.4 (0.02)
Passed Vit filter:                        92  (0.00672908); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.56
# Mc/sec: 496.39
//
Query:       MMETSP1325-20131115|1915_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 304.62
//
Query:       MMETSP1325-20131115|1918_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.084   12.8   0.1      0.096   12.6   0.1    1.2  1  PF12392.3 Collagenase


Domain annotation for each model (and alignments):
>> PF12392.3  Collagenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1     7e-06     0.096      44     108 ..      39     103 ..       6     104 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7e-06
   PF12392.3  44 dedgasvtvasevaleeArkkplteedlrkqlgklGntpFelesleveldeglfipvselnelRR 108
                  ++g++  v++   +  Ar++p  +e+lr + ++    pF++++  +e++ +   p++ +   RR
  MMETSP1325-20131115|1918_1  39 AQQGRRGGVQEAGGCLGARQAPQVAESLRRAQSEGDRQPFRVAEAAAEAETAGSSPAKLVTGNRR 103
                 46889999*****************************************9999999988887777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 508.03
//
Query:       MMETSP1325-20131115|1914_1  [L=419]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-29  100.5   0.0    1.3e-28   99.8   0.0    1.3  1  PF01370.16 NAD dependent epimerase/dehydratase family
    3.1e-14   52.3   0.0    6.8e-14   51.2   0.0    1.5  1  PF07993.7  Male sterility protein
    1.3e-11   43.8   0.0    2.4e-11   42.9   0.0    1.4  1  PF04321.12 RmlD substrate binding domain
    2.2e-09   37.4   0.3    6.4e-09   35.9   0.0    1.9  2  PF13460.1  NADH(P)-binding
    3.7e-09   35.5   0.0    1.3e-06   27.1   0.0    2.2  2  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family
      4e-08   33.2   2.5    4.5e-08   33.0   0.6    1.9  2  PF00106.20 short chain dehydrogenase
      4e-08   32.9   0.1      7e-08   32.2   0.1    1.3  1  PF08659.5  KR domain
    1.7e-05   24.0   0.1    4.1e-05   22.8   0.0    1.7  2  PF05368.8  NmrA-like family
     0.0062   15.3   0.0      0.025   13.3   0.0    1.8  2  PF02719.10 Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.097   12.4   0.0       0.27   11.0   0.0    1.7  2  PF01113.15 Dihydrodipicolinate reductase, N-terminus


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.8   0.0   9.8e-32   1.3e-28       2     236 .]      12     298 ..      11     298 .. 0.86

  Alignments for each domain:
  == domain 1    score: 99.8 bits;  conditional E-value: 9.8e-32
                 EEE--------HHHHHHHHH-TEEEEESSCSTCCCCCCHHH..........TBEEEB--TT-HHHHHHHHHHHT.SEEEE--S---HHHCCCSHHHHHHHHT---HHHHHHHHHHTT......EEEEEEEGGG---BSSSCB-TTS--.--SSH......HHHHHHHHHHHHHHHHHHHT-EEEEEEESEEE-TT.......-SHHCHHHHHHHHHH---S............................EEEE--TT-EEEEEEHHHHHHHHHHHHHSSS.--EEEEE- CS
  PF01370.16   2 lVtGatGfiGsalveallekgyevvnlirrtrseslatvri..........rvelveldltdkdalerlfaeeqpdaVihlAaesgvdassedpadfieanvegtlnlleaarkagv.....krflfasSsevygkdaeqpikEetpl.gplsp......YaaaKlageklveayaeeyglnaiilrlfnvyGpr....nfdeevshvipalirkilegee............................vtllgdGtqlRdflyveDvaealllvlehgdvageiyniG 236
                 lVtGa Gf+G+++ve++l++g++vv l+r +++ s  ++             v  ve+dl+d+++++r+++ ++  +VihlAa   ++ +  dpa++  +nv+++ nl++a+++a        +++++s++  yg+++++ ++ et + +  +p      Ya +K+ g++l+ a  ++ +++ +++ l    G      +++++v ++  al+r    g +                            ++   + +++  ++yv D+a+a+++++++ d  ge y iG
  MMETSP1325-20131115|1914_1  12 LVTGALGFVGRHVVEEILAAGHRVVCLCRPSSQGSATADGMvgelagefsqPVGRVECDLSDPADVARAVDLAECGTVIHLAAL--YSWWAPDPAAYQLHNVHVVANLVGAVKEASSktrrrIKLVQVSTVLAYGRPTGRGLTPETAFeEEDEPgpclsmYAGSKAEGDRLALASMHSGEIDGCVVYLACCLGRDpkllDPKRDVMRIKVALLRVWTPGARslafitsanlpepxfinapvlqdlvdgkIPATITSQAVFTYVYVGDAATAIVRAARKADNVGERYLIG 298
                 8**********************99999999998777776699********9999****************************8..666779*********************6666666667**************77765444444433333444447***********************************989989999999888888888866666777777777787888876666666655666669*************************99****998 PP

>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0   4.9e-17   6.8e-14       1     196 [.      13     198 ..      13     226 .. 0.81

  Alignments for each domain:
  == domain 1    score: 51.2 bits;  conditional E-value: 4.9e-17
   PF07993.7   1 lTGaTGfLGkvllekllrtqpevkiyllvRaksgesaleRleeelekkelfsallkelaerikvvegDlseprlgLseedlqelaeevdviihsAAtvnfeepykellr.tNvlGtrevlelak.....klkkl.vllhvST..avvageregeveekvyeeeederaklkglpntYtqsKalaEklvreasrrsglpvviiRps 196
                 +TGa Gf+G++++e++l   +  ++++l+R++s+ sa++         el  ++    ++ +  ve Dls+p    + +++ +l +e+  +ih+AA +++ +p +++++  Nv+ + +++   k     +++ +  l+ vST  a+ + + +g   e    +  +e+++ +     Y+ sKa++++l  + ++++++  +++ + 
  MMETSP1325-20131115|1914_1  13 VTGALGFVGRHVVEEILAAGH--RVVCLCRPSSQGSATADG----MVGELAGEF----SQPVGRVECDLSDPA---DVARAVDL-AECGTVIHLAALYSWWAPDPAAYQlHNVHVVANLVGAVKeasskTRR-RiKLVQVSTvlAYGRPTGRGLTPE----TAFEEEDEPGPCLSMYAGSKAEGDRLALASMHSGEIDGCVVYLA 198
                 8****************9999..9******99887666554....344555555....8999*********99...55555555.899**************999876537********9999966553344.36*******999999888876655....56788888999999************999998889988887655 PP

>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   1.8e-14   2.4e-11       3     141 ..      11     186 ..       9     196 .. 0.89

  Alignments for each domain:
  == domain 1    score: 42.9 bits;  conditional E-value: 1.8e-14
                 EEEE--------HHHHHH----EEEEE--TT..........................T--TT-HHHHHHHHHHH--SEEEE---...---HHHHHH-.HHHHHHHHT---HHHHHHHHH---EEEEEEEGGG----......-SS-B-TTS----.-S----TTT---HHHHHH-S CS
  PF04321.12   3 ilvtGanGqlGteLaralkeegvevvaldre..........................eldltdpeavaalvkeakpdvvvnaAA...ytavdkaEse.eeeayavnaegpenlAeaaaavgallihiSTdyVFdGe......kkrpYeeddetaP.lnvYGrtKlaGEqavlaanp 141
                 +lvtGa G +G+++++++ ++g+ vv l r+                          e+dl+dp+ va++v+ a++  v+++AA   + a d a  + ++    +n  g+ + A   +++ ++l+++ST   +          ++++ee+de++P l++Y+ +K++G++  la+++
  MMETSP1325-20131115|1914_1  11 FLVTGALGFVGRHVVEEILAAGHRVVCLCRPssqgsatadgmvgelagefsqpvgrvECDLSDPADVARAVDLAECGTVIHLAAlysWWAPDPAAYQlHNVHVVANLVGAVKEASSKTRRRIKLVQVSTVLAYGRPtgrgltPETAFEEEDEPGPcLSMYAGSKAEGDRLALASMH 186
                 79**********************9999888899*************************************************96555677888777567777789899999999999***********99996334557777788*********77************9998765 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   4.7e-12   6.4e-09       2     131 ..      12     181 ..      11     195 .. 0.76
   2 ?   -3.7   0.0       6.4   8.8e+03     171     181 ..     275     285 ..     264     292 .. 0.60

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 4.7e-12
   PF13460.1   2 aviGAtGktGrrivkellarghevtalvRnps...klpe..........ssgvtivkkDlfdledlaeala..gvdvvvdaf...garped........regvkhlldalkaa..gvrr...lvvvsaaglyrdkpglfelldkplf..........keylrakaaaeell 131
                 +v+GA G +Gr +v+e la+gh v++l R  s   ++++          s+ v  v++Dl+d++d+a a++  ++ +v++++   + +++d        +  v++l+ a+k+a  ++rr   lv vs++ +y  ++g+ +l+ + +f            y+ +ka++++l 
  MMETSP1325-20131115|1914_1  12 LVTGALGFVGRHVVEEILAAGHRVVCLCRPSSqgsATADgmvgelagefSQPVGRVECDLSDPADVARAVDlaECGTVIHLAalySWWAPDpaayqlhnVHVVANLVGAVKEAssKTRRrikLVQVSTVLAYGRPTGR-GLTPETAFeeedepgpclSMYAGSKAEGDRLA 181
                 79***************************9885543333888878878889999************98766559*****99988877777566677778999999999999862257754557789*****9977774.44444444444444446677777777777665 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 6.4
   PF13460.1 171 aDvAaalvdel 181
                  D A+a+v+++
  MMETSP1325-20131115|1914_1 275 GDAATAIVRAA 285
                 44444444443 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   9.8e-10   1.3e-06       1     106 [.      12     124 ..      12     215 .. 0.60
   2 !    6.3   0.0    0.0022       2.9     205     235 ..     261     291 ..     247     317 .. 0.76

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 9.8e-10
  PF01073.14   1 lVtGgsGFlGrrlvreLleleelkevrvldlrespelleelsklqvkt........vlegDvtdkekleeale..gvdvvihtaaiidvlgkaerdeilkvnvkGTqnvleacvka 106
                 lVtG+ GF+Gr++v+e+l +++   v  l +  s+        ++            +e+D+ d +++++a++  +  +vih+aa+           +   nv+   n++ a ++a
  MMETSP1325-20131115|1914_1  12 LVTGALGFVGRHVVEEILAAGH--RVVCLCRPSSQGSATADGMVGELAgefsqpvgRVECDLSDPADVARAVDlaECGTVIHLAALYSWWAPDPA-AYQLHNVHVVANLVGAVKEA 124
                 7********************5..3333332222222222222222113345566789*************97225567******9988773322.23334444455555544444 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0022
  PF01073.14 205 kigekevlsdrvYvgNvawahilaaraLqdp 235
                  + ++++++  vYvg +a a++ aar+ ++ 
  MMETSP1325-20131115|1914_1 261 ATITSQAVFTYVYVGDAATAIVRAARKADNV 291
                 55667788999***************97766 PP

>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.6   3.3e-11   4.5e-08       3      89 ..      11      94 ..       9     121 .. 0.85
   2 ?   -2.6   0.0         3     4e+03     142     160 ..     164     182 ..     163     188 .. 0.81

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 3.3e-11
                EEE---------HHHHHHHHHSSEEEEEEESS..SHHHHHHHHHHHHH--.-EEEEEE--TTSHHHHHHHHHHHHHH----SEEEEE-- CS
  PF00106.20  3 vliTGGlgglGlalArwLveegarhlvlvsrr.edapgaaeliaelealg.aevtvvacDvadrdalaallaeirkalgpldgvvhnag 89
                 l+TG+lg +G++++++++++g r++ l+  + + ++ a  ++ el+ +  + v  v cD++d++++a++++ ++        v+h a+
  MMETSP1325-20131115|1914_1 11 FLVTGALGFVGRHVVEEILAAGHRVVCLCRPSsQGSATADGMVGELAGEFsQPVGRVECDLSDPADVARAVDLAE-----CGTVIHLAA 94
                69****************************996555556666999*955549999999*************9888.....666666665 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 3
                 STT.HHHHHHHCHHHCCHH CS
  PF00106.20 142 spgqaaYaaakaaldalae 160
                 +p  + Ya +ka  d la 
  MMETSP1325-20131115|1914_1 164 GPCLSMYAGSKAEGDRLAL 182
                 577899******9999985 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.1   5.2e-11     7e-08       2      89 ..      10      93 ..       9      98 .. 0.89

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 5.2e-11
                -EEE----SHHHHHHHHHHHH-----EEEEE--.---------HHHHHH-.---EEEEE--TTSHHHHHHHH----TTS.---EEEE-- CS
   PF08659.5  2 tyLvtGGlgglGlelarwLaergarhlvllsrsaapdeeaeallaeleal.gaevtvvaaDvadrdavealleeveaeepplrGvvhaA 89
                ++LvtG+lg +G+++++++++ g r + l+  s++ +++a  ++ el+      v  v++D++d+++v+++++ +e        v+h+A
  MMETSP1325-20131115|1914_1 10 SFLVTGALGFVGRHVVEEILAAGHRVVCLCRPSSQGSATADGMVGELAGEfSQPVGRVECDLSDPADVARAVDLAECG-----TVIHLA 93
                68*******************************99999999*******975889******************987633.....366666 PP

>> PF05368.8  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0     3e-08   4.1e-05       2      66 ..      12      85 ..      11     128 .. 0.82
   2 ?   -2.2   0.0       1.3   1.7e+03     140     196 ..     264     288 ..     254     316 .. 0.57

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 3e-08
                EESS----HHHHHHHHHHH---EEEEE-S--..........---HHHHHHHSTTEEE---TT-HHHHHHHH---- CS
   PF05368.8  2 lviGaTGrqGksvvraslkaghkvralvRdl..........kselakslkaaGvelvegdlddkeslvealkgvd 66
                lv+Ga G +G++vv+ +l+agh+v  l R++           +ela +++ ++v  ve dl+d + +++a++ ++
  MMETSP1325-20131115|1914_1 12 LVTGALGFVGRHVVEEILAAGHRVVCLCRPSsqgsatadgmVGELAGEFS-QPVGRVECDLSDPADVARAVDLAE 85
                89***********************************9999999999996.79*****************99876 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 1.3
                 EE---BGGG-BSSS-SBEEE----.-EEEEESS-TTS-EE-HHHH---HHHHHHH-- CS
   PF05368.8 140 vyagffmenflsllaqvgdlepsrdkvvllgpgnpkavlldkeeDiGtfvikilkdp 196
                  +  +f+                                 + + D +t++++++ + 
  MMETSP1325-20131115|1914_1 264 TSQAVFTY--------------------------------VYVGDAATAIVRAARKA 288
                 44444433................................34444444444444444 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   1.9e-05     0.025       2     128 ..      12     139 ..      11     147 .. 0.69
   2 ?   -0.8   0.0      0.35   4.9e+02     180     226 ..     249     295 ..     248     306 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.9e-05
  PF02719.10   2 lvtGagGsiGselvrqilkkkpkkiillerdElklye...iekeleeelkkeklkveivpvigdvrdkerleealeelkvdvvfhaAAlKhV....PlveenpleavktNvlgtenvieaaieagvekvvliSt 128
                 lvtGa G +G+++v++il+   + + l   + +   +   +  el+ e+++   +     v +d+ d + +++a++  ++ +v+h AAl       P++ +     v  N +g+ + ++  ++ ++ k+v +St
  MMETSP1325-20131115|1914_1  12 LVTGALGFVGRHVVEEILAAGHRVVCLCRPSSQGSATadgMVGELAGEFSQPVGR-----VECDLSDPADVARAVDLAECGTVIHLAALYSWwapdPAAYQLHNVHVVANLVGAVKEASSKTRRRI-KLVQVST 139
                 8********************9999998666554444001555566666665554.....55**************************96532222444444444555666666665555555554.3556665 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.35
  PF02719.10 180 plFkkqikeggpvtvTdpemtRyfmtieeavqLvlqagalakggeif 226
                 p+ ++ ++   p t+T + +  y+   + a+ +v  a +  + ge +
  MMETSP1325-20131115|1914_1 249 PVLQDLVDGKIPATITSQAVFTYVYVGDAATAIVRAARKADNVGERY 295
                 5566677777899*********9887766777776666666667765 PP

>> PF01113.15  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00019      0.27       4      52 ..      12      61 ..      10      92 .. 0.75
   2 ?   -4.0   0.0       8.6   1.2e+04      81      98 ..     386     403 ..     381     411 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00019
                --B--------HHHHHHHH.---EE-EE-----.................. CS
  PF01113.15  4 avvGasGrmGkevikaieeaedlelvaavdrke..selegkdagellglgk 52
                +v+Ga G +G++v+++i + +++++v+    ++  s++ +  +gel+g ++
  MMETSP1325-20131115|1914_1 12 LVTGALGFVGRHVVEEILA-AGHRVVCLCRPSSqgSATADGMVGELAGEFS 61
                69****************9.6777776665544347888888888888763 PP

  == domain 2    score: -4.0 bits;  conditional E-value: 8.6
                 HHHHHHHHHHT---EE-- CS
  PF01113.15  81 lenlklalekgvklViGT 98 
                  e ++++ +++ + V+G+
  MMETSP1325-20131115|1914_1 386 EEAIEYIRAHEAQSVVGS 403
                 566777777778888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.79u 0.38s 00:00:01.17 Elapsed: 00:00:00.63
# Mc/sec: 1593.77
//
Query:       MMETSP1325-20131115|1920_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|1922_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-14   52.5   0.0    1.2e-13   50.7   0.0    1.8  2  PF01042.16 Endoribonuclease L-PSP


Domain annotation for each model (and alignments):
>> PF01042.16  Endoribonuclease L-PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   9.1e-18   1.2e-13      55     119 ..       2      64 ..       1      66 [. 0.97
   2 ?   -0.1   0.0     0.049   6.7e+02      91     118 ..      69      98 ..      64     100 .. 0.74

  Alignments for each domain:
  == domain 1    score: 50.7 bits;  conditional E-value: 9.1e-18
                 HHHHTT--GGGEEEEEEEESSGGGHHHHHHHHHHHSSSS-S.-EEEEEE-SB-GGG-SEEEEEEE CS
  PF01042.16  55 vLaaagaslsdvvkvtvFladiedfaevnevyneafdeeksaParsavevaaLpkgakvEieaia 119
                 +L++ag++ s+ v v+v+++die + e+n++y+e++ ++k  Par++v v +L  g+++E eaia
  MMETSP1325-20131115|1922_1   2 ILEEAGSDPSKLVSVRVYVTDIELWGEFNTLYEEFVGDHK--PARAVVPVPTLHYGFQIELEAIA 64 
                 8**************************************8..**********************9 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.049
                 SSS-..S.-EEEEEE-SB-GGG-SEEEEEE CS
  PF01042.16  91 deek..saParsavevaaLpkgakvEieai 118
                 ++++    P +  ++v +L + +  E e+i
  MMETSP1325-20131115|1922_1  69 SHQTsrVLPHTGSIGVVQLRPSVVTELEVI 98 
                 444334568888899999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 620.23
//
Query:       MMETSP1325-20131115|1921_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0028   17.2   0.0     0.0043   16.6   0.0    1.2  1  PF05743.8 UEV domain


Domain annotation for each model (and alignments):
>> PF05743.8  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   3.1e-07    0.0043      53     118 ..     152     222 ..     145     225 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 3.1e-07
                 EEE--TTTTTS--EEEE-GCC--TSGGGGGB-----B--HHH.HS--TTT--HHHHHHHHHH.....----- CS
   PF05743.8  53 liwvpesyPveaPivyvkptksmvikknenvdaqGrvylpyL.eeWkreksnlvslvqelaq.....afeee 118
                 ++ +p+ yP   P v +   + ++i  +    ++Grv+   L ++W+  +s+l++lv+ l++     +f+++
  MMETSP1325-20131115|1921_1 152 VVVLPRFYPHDLPQVRIGGGEWERIAASFAASPDGRVACATLaQQWNA-TSSLTDLVKILIHevvvpSFQNS 222
                 5678999******************************99998346776.9*********9996666556555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.51
# Mc/sec: 1433.12
//
Query:       MMETSP1325-20131115|1925_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       575  (0.0420568); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.53
# Mc/sec: 1021.84
//
Query:       MMETSP1325-20131115|1926_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 784.69
//
Query:       MMETSP1325-20131115|1924_1  [L=470]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   17.9   0.0     0.0034   16.8   0.0    1.5  1  PF13395.1  HNH endonuclease
  ------ inclusion threshold ------
      0.017   14.8   0.0      0.047   13.4   0.0    1.7  1  PF01844.18 HNH endonuclease


Domain annotation for each model (and alignments):
>> PF13395.1  HNH endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0     5e-07    0.0034      17      52 ..     195     231 ..     189     233 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 5e-07
   PF13395.1  17 kydiDHilPrslskdDslsNlVlvlrevNre.Ksnrl 52 
                  +d+DHi+P+s+++     N   v+  +Nr  Ks+r+
  MMETSP1325-20131115|1924_1 195 FFDVDHIWPWSRGGRSVQANFEAVQWAANRFpKSDRI 231
                 58******************99999999999999986 PP

>> PF01844.18  HNH endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   6.8e-06     0.047      12      39 ..     194     221 ..     184     225 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6.8e-06
  PF01844.18  12 dalevdHIiplskggaddlsNlvllCks 39 
                 ++++vdHI p+s+gg++ + N +++ + 
  MMETSP1325-20131115|1924_1 194 TFFDVDHIWPWSRGGRSVQANFEAVQWA 221
                 5799****************99988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       715  (0.0522967); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.55
# Mc/sec: 2047.80
//
Query:       MMETSP1325-20131115|1929_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-08   34.2   0.0    2.1e-08   33.7   0.0    1.2  1  PF10436.4 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase


Domain annotation for each model (and alignments):
>> PF10436.4  Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   1.6e-12   2.1e-08       2      47 ..      81     142 ..      80     145 .. 0.83

  Alignments for each domain:
  == domain 1    score: 33.7 bits;  conditional E-value: 1.6e-12
                 --BHHHHHH-----................-HHH...HHHHHHHHHHHHHHHHHHHHTTS-H CS
   PF10436.4   2 plslkqllqfgsnp................sektllkasqflreeLpvrlAhrvkeleelPd 47 
                 ++slk l++ g+                   +k l++ ++fl++eLp+rlAhrv++l+++P+
  MMETSP1325-20131115|1929_1  81 GVSLKTLTDTGKGDfvhlldghtevsdsdaMQKMLFQVAMFLHRELPIRLAHRVRDLDSIPM 142
                 6777777777774447777777777777778999*************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|1931_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-16   57.6   0.0    1.7e-15   56.6   0.0    1.5  1  PF00782.15 Dual specificity phosphatase, catalytic domain
    1.3e-08   34.3   0.1    1.8e-08   33.9   0.0    1.1  1  PF00102.22 Protein-tyrosine phosphatase
    2.6e-06   27.6   0.1    4.3e-06   26.9   0.1    1.3  1  PF13350.1  Tyrosine phosphatase family


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.0   3.8e-19   1.7e-15       1     130 [.     118     286 ..     118     289 .. 0.93

  Alignments for each domain:
  == domain 1    score: 56.6 bits;  conditional E-value: 3.8e-19
                 EEE--CTCHC.HHHHHH----EEEETTSSSSEE...ECCTT---EEEE-----..................................STT--CGGGHHHHHHHHHHH.CC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHS.TT-SS-STTHHHHHHH CS
  PF00782.15   1 lylgskstas.lalleklgitlvinvtkevpkn...nadkkseieylripved..................................etetkiskeleeavefieka.eqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerr.skispnagflrqLley 130
                 lylg +++    + l++ git+++nv+     +    +++   iey +i  +d                                  ++ ++ +k+le+a +f++ a ++ ++k++VHC aGi+RS+ l++a  m   + ++ + +++ + +r +++  n  f+ +L+++
  MMETSP1325-20131115|1931_1 118 LYLGDAKSTRdVPRLKERGITHILNVAGPSA-AgpvADYQSAGIEYSQIDADDeegyagyaxmhvcrrmgvrmkahaytqphttpapTHASDAAKHLEQALAFVALArDDAKGKCVVHCHAGINRSGVLVAAIHMLHTKSNVLDVVAHCRMQRgNAFLWNHTFQSELVAL 286
                 79**9999999****************5443.2699889999**********9****************************************************6538899*****************************************999999*9999999876 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   3.8e-12   1.8e-08     148     220 ..     209     272 ..     154     285 .. 0.72

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 3.8e-12
                 CGSGSHHHHHHHHHHHHHSSTTSS-EEEES------HHHHHHHHHHHHHHHHT--TBEHHHHHHHHHTTSTTS CS
  PF00102.22 148 vpespkslldlirkvrksktaksgpvvVhCsaGvgRtgtfvaldilleqleaeeekvdvlqivkelRkqRpgm 220
                 + ++ ++ l ++  +r   ++ +g++vVhC+aG++R+g++va+  +l   ++   k +vl++v ++R qR ++
  MMETSP1325-20131115|1931_1 209 AAKHLEQALAFVALAR---DDAKGKCVVHCHAGINRSGVLVAAIHML---HT---KSNVLDVVAHCRMQRGNA 272
                 2233444444444444...5569******************976655...55...3689***********887 PP

>> PF13350.1  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.1   9.5e-10   4.3e-06      31     148 ..     125     252 ..     121     259 .. 0.74

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 9.5e-10
   PF13350.1  31 teadlaaLaelgirtvvDLRseeEvekepdklpegvkyvnlpvlkeeae...speelaerlkeaeeaeeamaelyreileda...kkayravle..alaeee..gpvlfHCtaGKDRTGvvaalllsl 148
                 +++d+ +L+e gi++++    ++ +   +d + +g++y ++++ +ee +      ++ +r+  +++a+++ + + +  +++a   +k+++++l+  ala+++  g++++HC aG  R Gv++a ++ l
  MMETSP1325-20131115|1931_1 125 STRDVPRLKERGITHILNVAGPSAAGPVADYQSAGIEYSQIDADDEEGYagyAXMHVCRRMGVRMKAHAYTQPHTTPAPTHAsdaAKHLEQALAfvALARDDakGKCVVHCHAGINRSGVLVAAIHML 252
                 678999*****************************************9966633333344444666666666666666666544444444444300333333347******************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       402  (0.0294032); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.40s 00:00:01.03 Elapsed: 00:00:00.51
# Mc/sec: 1555.28
//
Query:       MMETSP1325-20131115|1927_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1083.15
//
Query:       MMETSP1325-20131115|1934_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-10   40.9   1.4    2.1e-10   40.1   1.0    1.4  1  PF00301.15 Rubredoxin
  ------ inclusion threshold ------
      0.086   11.0   0.0       0.12   10.5   0.0    1.1  1  PF05876.7  Phage terminase large subunit (GpA)
      0.091   12.4   0.2         15    5.3   0.0    2.2  2  PF12760.2  Transposase zinc-ribbon domain
       0.19   11.9   2.5       0.61   10.3   0.2    2.3  2  PF13465.1  Zinc-finger double domain


Domain annotation for each model (and alignments):
>> PF00301.15  Rubredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   1.0   6.2e-14   2.1e-10       2      47 .]     109     146 ..     108     146 .. 0.89

  Alignments for each domain:
  == domain 1    score: 40.1 bits;  conditional E-value: 6.2e-14
                 EEEST---EEETTGGTTT--------GGGS-TT-B-ST---BGGGE CS
  PF00301.15   2 yeCkvCgyvydpaegdpdegippgTpFedlpddWvCPvCgagkeqF 47 
                 yeCkvCgy y + ++        gT F dlp+ W+CP+C  +k  F
  MMETSP1325-20131115|1934_1 109 YECKVCGYSYVEGDQ--------GTMFLDLPNSWRCPQCLSQKGVF 146
                 9*********98774........9***************8888665 PP

>> PF05876.7  Phage terminase large subunit (GpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   3.5e-05      0.12     217     271 ..      95     160 ..      82     168 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 3.5e-05
   PF05876.7 217 lkw.ekgeapetaryvCphCgseieehekraml..aaGeWvatap........arrskiagfhlna 271
                 lk  ek   +et++y+C+ Cg    e ++ +m       W++ ++        a++++iagf  n+
  MMETSP1325-20131115|1934_1  95 LKEaEKFVVQETGEYECKVCGYSYVEGDQGTMFldLPNSWRCPQClsqkgvfyAKTKTIAGFAENQ 160
                 3333333389*********************99655588******999999999999999997665 PP

>> PF12760.2  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.005        17      33      45 ..     104     116 ..      91     117 .. 0.79
   2 ?    5.3   0.0    0.0044        15      16      33 ..     131     148 ..     128     162 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.005
   PF12760.2  33 ktrglyqCkeCrk 45 
                 +  g y+Ck C++
  MMETSP1325-20131115|1934_1 104 QETGEYECKVCGY 116
                 44799******97 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.0044
   PF12760.2  16 pngfvCphCgsreayrik 33 
                 pn  +Cp+C s++  +++
  MMETSP1325-20131115|1934_1 131 PNSWRCPQCLSQKGVFYA 148
                 67789****999766655 PP

>> PF13465.1  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.2   0.00018      0.61      14      25 ..     108     119 ..      99     120 .. 0.82
   2 ?    1.1   0.1      0.14   4.9e+02      15      21 ..     134     140 ..     131     142 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00018
   PF13465.1  14 pyeCplCgktFk 25 
                  yeC++Cg++++
  MMETSP1325-20131115|1934_1 108 EYECKVCGYSYV 119
                 4********996 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.14
   PF13465.1  15 yeCplCg 21 
                   Cp+C 
  MMETSP1325-20131115|1934_1 134 WRCPQCL 140
                 68****5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       553  (0.0404476); expected 273.4 (0.02)
Passed bias filter:                      482  (0.0352545); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 869.79
//
Query:       MMETSP1325-20131115|1936_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|1935_1  [L=339]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.9   9.4       0.35   10.6   6.4    1.8  1  PF14374.1 60S ribosomal protein L4 C-terminal domain


Domain annotation for each model (and alignments):
>> PF14374.1  60S ribosomal protein L4 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   6.4   2.6e-05      0.35      22      77 ..      66     124 ..      62     127 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 2.6e-05
   PF14374.1  22 deiqsvlrapkkkakrk.avqkkNPLkN..lqallkLNPyAkvarrkallaekkrkkak 77 
                 de++   +a++  + +k +   k  L++   ++++kLNP A++a+++++++e+++k++ 
  MMETSP1325-20131115|1935_1  66 DEVKTKAKAKAVATATKaKEAGKAQLTKakSAVMAKLNPAAAAAAAAKAKEEAEEKAKA 124
                 677777777776666666556666666511579***************99988877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1745  (0.127633); expected 273.4 (0.02)
Passed bias filter:                      694  (0.0507607); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.41s 00:00:01.24 Elapsed: 00:00:00.61
# Mc/sec: 1331.75
//
Query:       MMETSP1325-20131115|1937_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       970  (0.0709479); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.48
# Mc/sec: 1422.84
//
Query:       MMETSP1325-20131115|1939_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 866.77
//
Query:       MMETSP1325-20131115|1942_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 537.85
//
Query:       MMETSP1325-20131115|1938_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1083.15
//
Query:       MMETSP1325-20131115|1944_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.7   0.0      0.033   14.1   0.0    1.3  1  PF12253.3 Chromatin assembly factor 1 subunit A


Domain annotation for each model (and alignments):
>> PF12253.3  Chromatin assembly factor 1 subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.4e-06     0.033      23      58 ..     117     152 ..      98     162 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.4e-06
   PF12253.3  23 savvsarnPlkqdkteldYdyDSdeeWeeeeeGedl 58 
                 +++++a n   +d+ +ld  yD  +eWee+e   d+
  MMETSP1325-20131115|1944_1 117 KHMTHAANTQGEDHYTLDEGYDMHDEWEEDEGPGDV 152
                 4556666777788899***********887755555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 727.32
//
Query:       MMETSP1325-20131115|1945_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 332.83
//
Query:       MMETSP1325-20131115|1946_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 302.94
//
Query:       MMETSP1325-20131115|1941_1  [L=414]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.2e-16   57.7   0.0      1e-15   57.2   0.0    1.2  1  PF12777.2 Microtubule-binding stalk of dynein motor


Domain annotation for each model (and alignments):
>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2   0.0   7.5e-20     1e-15      82     212 ..      63     208 ..      28     247 .. 0.81

  Alignments for each domain:
  == domain 1    score: 57.2 bits;  conditional E-value: 7.5e-20
   PF12777.2  82 edlakaepallaaqealntlnknnltelksfgsppsavvnvaaavmvlla......p...rgkipkdrswkaak.vvma.kvdafldsli....nfdkenihenclkaikeylndpefepefikskslaaaglcswvinivrfyev 212
                    + ae a   a  al+tl+kn++ e+ s+ +pp  v +  aa +vlla      p   +gk+  d  w   k ++++     f+  l     + d  n++   +  +++yl+  +f+p+ ++ +s  a+ lcs+v+n+v +y++
  MMETSP1325-20131115|1941_1  63 RTTTTAEDAAARASTALDTLKKNDIGEFMSIHAPPAGVCQALAATIVLLAgistciPlkgNGKVACDLNWDKVKgLILGgMSHEFVPLLRtvkqRIDDGNMPAVNFEEVRPYLRSDDFDPKILALRSRGASQLCSFVVNMVLYYDL 208
                 5567899****************************************998444444254489********888754454144556544431112467778888888999***********************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.38s 00:00:01.12 Elapsed: 00:00:00.57
# Mc/sec: 1710.50
//
Query:       MMETSP1325-20131115|1940_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.55
# Mc/sec: 1263.53
//
Query:       MMETSP1325-20131115|1947_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 576.15
//
Query:       MMETSP1325-20131115|1943_1  [L=585]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   14.1   5.7      0.025   13.4   3.9    1.2  1  PF08395.7 7tm Chemosensory receptor


Domain annotation for each model (and alignments):
>> PF08395.7  7tm Chemosensory receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.9   1.8e-06     0.025     239     294 ..     283     340 ..     282     361 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.8e-06
   PF08395.7 239 lqlllillynfititvlly.ylysslle.dsslflllvfilwllifllllvlivyace 294
                 l+l+ ++++ f+ ++++l+ +l+ ++l+ d+++f l+ ++++l++f+l+++l v+ ++
  MMETSP1325-20131115|1943_1 283 LLLIGSFMCGFWALLFGLFsILMKASLDsDETNFALWAYFYFLCFFMLFVILAVILSN 340
                 789999*************988888888***********************8888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       887  (0.0648771); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.02u 0.38s 00:00:01.40 Elapsed: 00:00:00.57
# Mc/sec: 2417.02
//
Query:       MMETSP1325-20131115|1948_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   17.6   2.7      0.003   17.5   0.7    2.0  2  PF13499.1  EF-hand domain pair
     0.0086   15.2   0.0      0.032   13.4   0.0    2.0  1  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.022   13.9   0.0      0.072   12.3   0.0    1.9  1  PF00036.27 EF hand
      0.023   14.4   0.7      0.074   12.8   0.0    2.2  2  PF13405.1  EF-hand domain
       0.29   10.6   0.0       0.29   10.6   0.0    2.3  3  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.2   3.3e+03      33      46 ..      70      83 ..      49      85 .. 0.67
   2 !   17.5   0.7   1.1e-06     0.003       3      54 ..     145     191 ..     137     237 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.2
   PF13499.1 33 lsdeevrevldyif 46
                +  ++++e+l +++
  MMETSP1325-20131115|1948_1 70 MDKGQMKEELADWI 83
                22778888888887 PP

  == domain 2    score: 17.5 bits;  conditional E-value: 1.1e-06
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifk.elDkngd 54 
                   +F+++D+dgdg l +eeL  +   ++s+      ++ ++++f+ + D+  d
  MMETSP1325-20131115|1948_1 145 GAEFRRIDTDGDGELIYEELHSAVSEFNSD------EDAIYDCFDdCQDHQED 191
                 458999999999999999999999999876......33444445555555555 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   1.2e-05     0.032       5      16 ..     148     159 ..     146     168 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.2e-05
                 HHHH--S----B CS
   PF13202.1   5 FrafDlNgDGkI 16 
                 Fr++D++gDG +
  MMETSP1325-20131115|1948_1 148 FRRIDTDGDGEL 159
                 **********87 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.6e-05     0.072       6      27 ..     148     169 ..     146     171 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.6e-05
                 HHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   6 FkefDkDgdGkIsfeEfkealk 27 
                 F+ +D+DgdG + +eE+ +a++
  MMETSP1325-20131115|1948_1 148 FRRIDTDGDGELIYEELHSAVS 169
                 9***********9999988876 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.7e-05     0.074       6      27 ..     148     169 ..     144     174 .. 0.89
   2 ?   -3.2   0.1       3.9   1.1e+04       3      15 ..     179     192 ..     177     193 .. 0.55

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.7e-05
                 -GCC-------B---HHHHHHH CS
   PF13405.1   6 FklfDkdgdGkidaeELrdaLr 27 
                 F+ +D+dgdG++  eEL +a +
  MMETSP1325-20131115|1948_1 148 FRRIDTDGDGELIYEELHSAVS 169
                 9***************998865 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 3.9
                 H---GCC.------ CS
   PF13405.1   3 reaFklf.DkdgdG 15 
                 +++F+   D+  dG
  MMETSP1325-20131115|1948_1 179 YDCFDDCqDHQEDG 192
                 56666555555555 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.84   2.3e+03       3      29 ..      58      82 ..      56      83 .. 0.69
   2 ?   10.6   0.0    0.0001      0.29      30      51 ..     147     168 ..     146     171 .. 0.88
   3 ?   -4.1   0.2       4.1   1.1e+04      28      35 ..     176     183 ..     176     184 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.84
   PF13833.1  3 GlItreeLkralallglkglseeevdi 29
                ++I ++ L+   +++ +++++ee +d+
  MMETSP1325-20131115|1948_1 58 DEIKAQKLRL--RKMDKGQMKEELADW 82
                6677777777..777666688888887 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0001
   PF13833.1  30 lfrefDtdgdGkisfeEFcvll 51 
                  fr +DtdgdG + +eE ++++
  MMETSP1325-20131115|1948_1 147 EFRRIDTDGDGELIYEELHSAV 168
                 59***************99875 PP

  == domain 3    score: -4.1 bits;  conditional E-value: 4.1
   PF13833.1  28 dilfrefD 35 
                 d+++++fD
  MMETSP1325-20131115|1948_1 176 DAIYDCFD 183
                 68999*99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       635  (0.0464453); expected 273.4 (0.02)
Passed bias filter:                      508  (0.0371562); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 1289.95
//
Query:       MMETSP1325-20131115|1950_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-19   67.1   9.8    1.7e-11   43.9   0.2    2.5  2  PF13499.1  EF-hand domain pair
    8.8e-18   62.0   7.9    1.2e-05   24.1   0.1    5.2  5  PF00036.27 EF hand
    1.3e-17   62.9  11.3    2.1e-09   36.7   0.1    4.2  3  PF13833.1  EF-hand domain pair
    3.4e-16   57.4   7.1    9.7e-05   21.8   0.1    4.6  4  PF13405.1  EF-hand domain
    1.3e-10   39.9   4.8    1.3e-05   24.2   0.0    4.3  4  PF13202.1  EF hand
    1.7e-06   27.2   0.0    2.6e-06   26.6   0.0    1.3  1  PF00069.20 Protein kinase domain
    0.00031   20.6   1.8     0.0012   18.7   0.1    2.3  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
  ------ inclusion threshold ------
       0.27   10.5   4.1        4.9    6.3   0.0    2.6  3  PF03357.16 Snf7


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   0.2     1e-14   1.7e-11       2      65 ..     125     184 ..     121     185 .. 0.87
   2 !   26.3   2.7   3.1e-09   5.2e-06       4      65 ..     198     256 ..     192     257 .. 0.83

  Alignments for each domain:
  == domain 1    score: 43.9 bits;  conditional E-value: 1e-14
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 ++++F++lD +++g ++ ee++++l ++g e+ +  v++    +fk +D ++ Gv+ ++Efl+a
  MMETSP1325-20131115|1950_1 125 MRDEFSKLDEHHNGEISFEEFKHALERSGVEMDEPAVKD----LFKSIDFDRQGVIHWNEFLAA 184
                 4679*************************5555555555....5*****************987 PP

  == domain 2    score: 26.3 bits;  conditional E-value: 3.1e-09
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkn....gdGvlsfeEflqa 65 
                  +F++lD+dg+gy++ + L+ l    g++ sd+e+  +    ++++D +    ++++++f+Ef+++
  MMETSP1325-20131115|1950_1 198 AVFDRLDTDGSGYISFDNLKSLV---GDDFSDDELHAM----LNDVDPDltlkQNEQIQFDEFVTI 256
                 47********************8...533335555556....**********9999*******987 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0     9e-08   0.00015       3      27 ..     126     150 ..     124     152 .. 0.90
   2 !   14.0   0.0   1.2e-05      0.02       2      25 ..     161     184 ..     160     186 .. 0.93
   3 !   24.1   0.1   7.1e-09   1.2e-05       1      26 [.     195     220 ..     195     222 .. 0.91
   4 ?   -2.2   0.0       1.8   3.1e+03       1      12 [.     228     239 ..     227     239 .. 0.70
   5 ?    4.1   0.0     0.017        29      14      28 ..     245     259 ..     243     260 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 9e-08
                 HHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfkealk 27 
                 ++ F+++D  ++G IsfeEfk+al+
  MMETSP1325-20131115|1950_1 126 RDEFSKLDEHHNGEISFEEFKHALE 150
                 677*******************997 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkea 25 
                 +k++Fk +D D+ G I  +Ef++a
  MMETSP1325-20131115|1950_1 161 VKDLFKSIDFDRQGVIHWNEFLAA 184
                 799******************976 PP

  == domain 3    score: 24.1 bits;  conditional E-value: 7.1e-09
                 HHHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkeal 26 
                 e++ +F+ +D+Dg+G+Isf+ +k+++
  MMETSP1325-20131115|1950_1 195 EMQAVFDRLDTDGSGYISFDNLKSLV 220
                 6899****************999876 PP

  == domain 4    score: -2.2 bits;  conditional E-value: 1.8
                 HHHHHHHHHCTT CS
  PF00036.27   1 elkeaFkefDkD 12 
                 el  + + +D D
  MMETSP1325-20131115|1950_1 228 ELHAMLNDVDPD 239
                 567777788876 PP

  == domain 5    score: 4.1 bits;  conditional E-value: 0.017
                 SSEBEHHHHHHHHHH CS
  PF00036.27  14 dGkIsfeEfkealkk 28 
                 + +I f+Ef++++++
  MMETSP1325-20131115|1950_1 245 NEQIQFDEFVTIVNS 259
                 668*******99875 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.1   1.2e-12   2.1e-09       1      51 [.     136     185 ..     136     187 .. 0.95
   2 !   26.5   0.3   1.8e-09   3.1e-06      15      47 ..     184     216 ..     182     220 .. 0.86
   3 !    8.8   1.8   0.00064       1.1       5      48 ..     211     254 ..     211     259 .. 0.76

  Alignments for each domain:
  == domain 1    score: 36.7 bits;  conditional E-value: 1.2e-12
   PF13833.1   1 ekGlItreeLkral.allglkglseeevdilfrefDtdgdGkisfeEFcvll 51 
                 ++G+I++ee+k+al ++ g++ + e  v +lf+ +D+d+ G i+++EF+++ 
  MMETSP1325-20131115|1950_1 136 HNGEISFEEFKHALeRS-GVE-MDEPAVKDLFKSIDFDRQGVIHWNEFLAAT 185
                 69************999.9**.**************************9875 PP

  == domain 2    score: 26.5 bits;  conditional E-value: 1.8e-09
   PF13833.1  15 allglkglseeevdilfrefDtdgdGkisfeEF 47 
                 a+l ++++ +ee++++f+ +Dtdg+G+isf+  
  MMETSP1325-20131115|1950_1 184 ATLDVSSFDDEEMQAVFDRLDTDGSGYISFDNL 216
                 7788888***********************965 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.00064
   PF13833.1   5 ItreeLkralallglkglseeevdilfrefDtd....gdGkisfeEFc 48 
                 I++++Lk+   l+g + +s++e++++++ +D d    ++  i f+EF+
  MMETSP1325-20131115|1950_1 211 ISFDNLKS---LVGDD-FSDDELHAMLNDVDPDltlkQNEQIQFDEFV 254
                 78899999...33544.**************87444467888888887 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.7e-07    0.0003       2      28 ..     125     151 ..     124     156 .. 0.91
   2 !   15.4   0.1   6.5e-06     0.011       2      25 ..     161     184 ..     160     188 .. 0.92
   3 !   21.8   0.1   5.7e-08   9.7e-05       1      26 [.     195     220 ..     195     233 .. 0.91
   4 ?    0.4   0.0      0.43   7.3e+02      13      26 ..     244     257 ..     228     262 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.7e-07
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 +r+ F ++D  ++G+i++eE+++aL +
  MMETSP1325-20131115|1950_1 125 MRDEFSKLDEHHNGEISFEEFKHALER 151
                 7899*********************84 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 6.5e-06
                 HH---GCC-------B---HHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrda 25 
                 ++++Fk +D+d+ G i ++E+++a
  MMETSP1325-20131115|1950_1 161 VKDLFKSIDFDRQGVIHWNEFLAA 184
                 579******************876 PP

  == domain 3    score: 21.8 bits;  conditional E-value: 5.7e-08
                 HHH---GCC-------B---HHHHHH CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrdaL 26 
                 e++++F+ +D+dg+G+i+++ L+++ 
  MMETSP1325-20131115|1950_1 195 EMQAVFDRLDTDGSGYISFDNLKSLV 220
                 799******************99875 PP

  == domain 4    score: 0.4 bits;  conditional E-value: 0.43
                 ----B---HHHHHH CS
   PF13405.1  13 gdGkidaeELrdaL 26 
                 ++ +i ++E++ + 
  MMETSP1325-20131115|1950_1 244 QNEQIQFDEFVTIV 257
                 67899999998775 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00017      0.29       2      23 ..     126     147 ..     125     149 .. 0.85
   2 ?    4.6   0.1     0.011        20       2      16 ..     162     176 ..     161     184 .. 0.81
   3 !   24.2   0.0   7.4e-09   1.3e-05       1      25 []     196     220 ..     196     220 .. 0.94
   4 ?   -1.8   0.0       1.2     2e+03      16      24 ..     248     256 ..     247     257 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00017
                 HHHHHHH--S----B-HHHHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreELkr 23 
                 +d F+++D    G Is+eE+k 
  MMETSP1325-20131115|1950_1 126 RDEFSKLDEHHNGEISFEEFKH 147
                 66699999999*********96 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.011
                 HHHHHHH--S----B CS
   PF13202.1   2 kdtFrafDlNgDGkI 16 
                 kd+F+ +D+++ G I
  MMETSP1325-20131115|1950_1 162 KDLFKSIDFDRQGVI 176
                 89********97776 PP

  == domain 3    score: 24.2 bits;  conditional E-value: 7.4e-09
                 HHHHHHHH--S----B-HHHHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkrlv 25 
                 ++++F+++D++g+G Is++ Lk lv
  MMETSP1325-20131115|1950_1 196 MQAVFDRLDTDGSGYISFDNLKSLV 220
                 689******************9986 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 1.2
                 B-HHHHHHH CS
   PF13202.1  16 IsreELkrl 24 
                 I ++E+ ++
  MMETSP1325-20131115|1950_1 248 IQFDEFVTI 256
                 889999775 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   1.5e-09   2.6e-06     184     260 .]       1      79 [.       1      79 [. 0.94

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 1.5e-09
                 HHHHHHHHHHC---TTT..STHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 184 slGvilyelltgklpfs..geseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 slGvi y +ltgk+pf   ++   d +++++ i+k++ +++e+++ + s ++  ++ ++l  dp+kRlta+e+ +h+++
  MMETSP1325-20131115|1950_1   1 SLGVISYMILTGKPPFLvmDSGGVDFKKTVQLIRKGEFKRPEEEKPDLSLDAVAFLMEVLVLDPTKRLTAAEAQSHKFF 79 
                 89**************84455889999******************9*9****************************997 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.1   7.1e-07    0.0012      46     111 ..     115     182 ..      72     184 .. 0.78
   2 ?    1.1   0.1      0.21   3.6e+02      55      81 ..     195     221 ..     187     255 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 7.1e-07
   PF10591.4  46 kknskeckeaveWkFnqlDtnkdkvlsksElap.lraplvkl.ehCikeffksCDadkdkkisleEWc 111
                    ++e  + ++ +F++lD ++++ +s +E+++ l+++ v++ e  +k +fks D d+ + i ++E+ 
  MMETSP1325-20131115|1950_1 115 AMLMPEQVKTMRDEFSKLDEHHNGEISFEEFKHaLERSGVEMdEPAVKDLFKSIDFDRQGVIHWNEFL 182
                 44555666777889*****************8537777677736799*******************97 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.21
   PF10591.4  55 aveWkFnqlDtnkdkvlsksElaplra 81 
                 +++  F++lDt+  +++s   l++l  
  MMETSP1325-20131115|1950_1 195 EMQAVFDRLDTDGSGYISFDNLKSLVG 221
                 556679999999999999999988765 PP

>> PF03357.16  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.4   2.4e+03     101     116 ..     117     132 ..      93     140 .. 0.67
   2 ?    6.3   0.0    0.0029       4.9     121     151 ..     176     205 ..     144     209 .. 0.75
   3 ?    5.0   0.1    0.0074        13     134     165 ..     219     252 ..     212     259 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 1.4
  PF03357.16 101 mdidkidklmdeiedq 116
                 + +++++ + de+++ 
  MMETSP1325-20131115|1950_1 117 LMPEQVKTMRDEFSKL 132
                 3455666666666554 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0029
  PF03357.16 121 deisealsrslddadeedEeeldaeLdaLeq 151
                    +e l+ +ld  +++d+ee++a+ d L  
  MMETSP1325-20131115|1950_1 176 IHWNEFLAATLDV-SSFDDEEMQAVFDRLDT 205
                 45699******65.*************9965 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.0074
  PF03357.16 134 a..deedEeeldaeLdaLeqelgdeelesvelps 165
                    d+++++el a L+++  +l+ ++ e+ +  +
  MMETSP1325-20131115|1950_1 219 LvgDDFSDDELHAMLNDVDPDLTLKQNEQIQFDE 252
                 3459*****************9999966665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      455  (0.0332797); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.53
# Mc/sec: 1401.64
//
Query:       MMETSP1325-20131115|1951_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-22   77.3   0.2    1.7e-10   41.0   0.0    2.5  3  PF13637.1  Ankyrin repeats (many copies)
    7.8e-19   67.6   0.0    4.1e-12   46.1   0.0    2.0  2  PF12796.2  Ankyrin repeats (3 copies)
    1.9e-15   55.6   0.0    4.4e-05   22.9   0.1    4.1  4  PF00023.25 Ankyrin repeat
    1.2e-13   50.7   0.7    1.5e-07   31.3   0.4    3.2  4  PF13857.1  Ankyrin repeats (many copies)
    2.8e-13   48.5   0.0     0.0088   16.0   0.1    4.0  4  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00016      0.44      15      52 ..       3      40 ..       2      42 .. 0.89
   2 !   41.0   0.0   6.2e-14   1.7e-10       2      54 .]      23      78 ..      22      78 .. 0.91
   3 !   33.7   0.0   1.2e-11   3.3e-08       6      53 ..      63     110 ..      62     111 .. 0.95

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00016
   PF13637.1 15 elvklLlekgidinrtdesGntaLhiAalrgnieilkl 52
                +++++L ekg++  ++d  G t++h A ++g+++++++
  MMETSP1325-20131115|1951_1  3 PVLEFLNEKGANFQACDFGGSTPFHEAGRKGHPDAIEF 40
                788888899999999988899**************998 PP

  == domain 2    score: 41.0 bits;  conditional E-value: 6.2e-14
   PF13637.1  2 ltaLhyaaisgrlelvklLlekgid...inrtdesGntaLhiAalrgnieilklLl 54
                 t++h a ++g+ ++++++++ +++   i++td++G++aL +Aa +g+++ ++lLl
  MMETSP1325-20131115|1951_1 23 STPFHEAGRKGHPDAIEFMCSLDVSrldIHQTDGQGWNALTCAAAAGHLDTVRLLL 78
                699*****************86655555***************************8 PP

  == domain 3    score: 33.7 bits;  conditional E-value: 1.2e-11
   PF13637.1   6 hyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                   aa++g+l++v+lLl+kg +   +d +G+taL+ A l g+++++++L
  MMETSP1325-20131115|1951_1  63 TCAAAAGHLDTVRLLLDKGLSACIKDVDGRTALDWAELSGRVDVVEFL 110
                 57999****************9999**********************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   1.6e-07   0.00043      40      81 ..       3      44 ..       1      53 [. 0.90
   2 !   46.1   0.0   1.5e-15   4.1e-12      28      84 ..      54     116 ..      44     121 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 1.6e-07
   PF12796.2 40 eivklLleagadvnakdkegntpLhlAvrnghlelvklLlek 81
                 ++++L e+ga+ +a d  g tp h A r+gh ++++++++ 
  MMETSP1325-20131115|1951_1  3 PVLEFLNEKGANFQACDFGGSTPFHEAGRKGHPDAIEFMCSL 44
                68999**********************************987 PP

  == domain 2    score: 46.1 bits;  conditional E-value: 1.5e-15
   PF12796.2  28 t......pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgad 84 
                 t      +L +Aa+ag+l++v+lLl++g + + kd +g+t+L +A  +g++++v++L + +++
  MMETSP1325-20131115|1951_1  54 TdgqgwnALTCAAAAGHLDTVRLLLDKGLSACIKDVDGRTALDWAELSGRVDVVEFLSDLESE 116
                 3444455**************************************************998766 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.034        94      17      32 ..       4      19 ..       2      20 .. 0.87
   2 !    9.3   0.0   0.00032      0.88       2      23 ..      22      43 ..      21      49 .. 0.90
   3 !   22.9   0.1   1.6e-08   4.4e-05       2      32 ..      58      88 ..      57      89 .. 0.93
   4 !   15.5   0.0   3.5e-06    0.0095       1      26 [.      90     119 ..      90     121 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.034
                HHHHHHHTTSSTTHBH CS
  PF00023.25 17 vvklLlsqGAdlnaqd 32
                v+++L ++GA+  a+d
  MMETSP1325-20131115|1951_1  4 VLEFLNEKGANFQACD 19
                7899999****99988 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00032
                SCBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLls 23
                G TP H A ++g+++ +++  s
  MMETSP1325-20131115|1951_1 22 GSTPFHEAGRKGHPDAIEFMCS 43
                89***************99876 PP

  == domain 3    score: 22.9 bits;  conditional E-value: 1.6e-08
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                G+ +L +Aa  g+l+ v+lLl++G + +++d
  MMETSP1325-20131115|1951_1 58 GWNALTCAAAAGHLDTVRLLLDKGLSACIKD 88
                99**********************9988887 PP

  == domain 4    score: 15.5 bits;  conditional E-value: 3.5e-06
                 TSCBHHHHHHHTTHHHHHHHHHH....TTS CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLls....qGA 26 
                 dG+T+L +A l+g+++vv++L +    qGA
  MMETSP1325-20131115|1951_1  90 DGRTALDWAELSGRVDVVEFLSDleseQGA 119
                 8*******************9776666665 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0016       4.3      32      54 ..       4      27 ..       2      29 .. 0.86
   2 !   20.2   0.0   1.6e-07   0.00045      11      56 .]      17      65 ..       8      65 .. 0.87
   3 !   31.3   0.4   5.4e-11   1.5e-07       8      56 .]      50      98 ..      48      98 .. 0.96
   4 ?   -1.2   0.0      0.86   2.4e+03      27      36 ..     102     111 ..     100     119 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0016
   PF13857.1 32 vrlLl.apgadlnlrdsdgltald 54
                v ++l ++ga+  ++d+ g t+++
  MMETSP1325-20131115|1951_1  4 VLEFLnEKGANFQACDFGGSTPFH 27
                556777****************97 PP

  == domain 2    score: 20.2 bits;  conditional E-value: 1.6e-07
   PF13857.1 11 atdeggntpLhlAakggalevvrlLl...apgadlnlrdsdgltaldlA 56
                a d gg+tp+h A ++g+++++++++     + d++ +d +g++al +A
  MMETSP1325-20131115|1951_1 17 ACDFGGSTPFHEAGRKGHPDAIEFMCsldVSRLDIHQTDGQGWNALTCA 65
                4467788***************************************998 PP

  == domain 3    score: 31.3 bits;  conditional E-value: 5.4e-11
   PF13857.1  8 dvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                d+++td++g ++L  Aa +g+l+ vrlLl++g ++ ++d dg+tald+A
  MMETSP1325-20131115|1951_1 50 DIHQTDGQGWNALTCAAAAGHLDTVRLLLDKGLSACIKDVDGRTALDWA 98
                88999******************************************98 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 0.86
   PF13857.1  27 galevvrlLl 36 
                 g+++vv++L 
  MMETSP1325-20131115|1951_1 102 GRVDVVEFLS 111
                 8999*99996 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.17   4.7e+02      17      28 ..       4      15 ..       2      17 .. 0.85
   2 !   13.2   0.0   2.7e-05     0.074       2      25 ..      22      45 ..      21      53 .. 0.85
   3 !   16.0   0.1   3.2e-06    0.0088       2      25 ..      58      81 ..      57      86 .. 0.93
   4 !   12.8   0.0   3.5e-05     0.096       1      23 [.      90     112 ..      90     119 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.17
   PF13606.1 17 lveaLlengadi 28
                ++e+L e+ga++
  MMETSP1325-20131115|1951_1  4 VLEFLNEKGANF 15
                789*******97 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 2.7e-05
   PF13606.1  2 GnTpLhlAasngrielveaLleng 25
                G Tp+h A ++g+++++e++++  
  MMETSP1325-20131115|1951_1 22 GSTPFHEAGRKGHPDAIEFMCSLD 45
                67******************9864 PP

  == domain 3    score: 16.0 bits;  conditional E-value: 3.2e-06
   PF13606.1  2 GnTpLhlAasngrielveaLleng 25
                G+++L +Aa  g+++ v++Ll++g
  MMETSP1325-20131115|1951_1 58 GWNALTCAAAAGHLDTVRLLLDKG 81
                99********************99 PP

  == domain 4    score: 12.8 bits;  conditional E-value: 3.5e-05
   PF13606.1   1 nGnTpLhlAasngrielveaLle 23 
                 +G+T+L++A  +gr+++ve+L +
  MMETSP1325-20131115|1951_1  90 DGRTALDWAELSGRVDVVEFLSD 112
                 79*******************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.61
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|1953_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.61
# Mc/sec: 326.06
//
Query:       MMETSP1325-20131115|1952_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       854  (0.0624634); expected 273.4 (0.02)
Passed bias filter:                      494  (0.0361322); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 973.21
//
Query:       MMETSP1325-20131115|1949_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-39  132.7   0.9    6.5e-39  132.5   0.6    1.0  1  PF00416.17 Ribosomal protein S13/S18
    0.00099   17.6   0.0     0.0011   17.5   0.0    1.2  1  PF05833.6  Fibronectin-binding protein A N-terminus (FbpA)
  ------ inclusion threshold ------
      0.037   13.6   0.0      0.056   13.0   0.0    1.3  1  PF06831.9  Formamidopyrimidine-DNA glycosylase H2TH domain


Domain annotation for each model (and alignments):
>> PF00416.17  Ribosomal protein S13/S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.5   0.6   1.4e-42   6.5e-39       1     106 []      14     142 ..      14     142 .. 0.99

  Alignments for each domain:
  == domain 1    score: 132.5 bits;  conditional E-value: 1.4e-42
                 --STT------TTTTTTTS------HHHHHHHHHTT--TTSB-----HHHHHHHSSGGGT.......................---STTHHHHHHHHHHHHHHHS-----TTT---------SS----- CS
  PF00416.17   1 rilntnvdgkkkieialteikGigrkkanqilkkldvdkekrvgelteeelekieeiven.......................ylvendlkrklredierlkkiksyrGlRHirglkvRGQrtktnart 106
                 rilntn+dg++k++++lt+i Gigr+ an i+kk++vd +kr+gelt++e+ek++ i++n                       + ++n+l  klred+erlkki+++rGlRH++g++vRGQ+tkt++r+
  MMETSP1325-20131115|1949_1  14 RILNTNIDGRRKVMFSLTAIGGIGRRFANLICKKAEVDPNKRAGELTQDEVEKLVAIIQNpkqfkipawflnrqkdyktgknsQAFSNNLGAKLREDLERLKKIRAHRGLRHYWGIRVRGQHTKTTGRK 142
                 89*****************************************************************************************************************************95 PP

>> PF05833.6  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.4e-07    0.0011     193     237 ..      29      73 ..       6     134 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 2.4e-07
   PF05833.6 193 lvkafqGlspllaeelvlragldketpveelseedlerlyealke 237
                  ++a+ G+++ +a+ ++++a++d+++++ el+++++e+l + +++
  MMETSP1325-20131115|1949_1  29 SLTAIGGIGRRFANLICKKAEVDPNKRAGELTQDEVEKLVAIIQN 73 
                 568889*********************************998877 PP

>> PF06831.9  Formamidopyrimidine-DNA glycosylase H2TH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.2e-05     0.056      34      75 ..      31      72 ..      11      80 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.2e-05
                TT-B----HHHHHHHHHTT--TTSBGGGS-HHHHHHHHHHHH CS
   PF06831.9 34 avvaGvGNiyadEvLFlagihPeklakslsekelellhkaik 75
                + + G+G  +a+ ++  a ++P+k a +l+++e+e l+  i+
  MMETSP1325-20131115|1949_1 31 TAIGGIGRRFANLICKKAEVDPNKRAGELTQDEVEKLVAIIQ 72
                6789********************************998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.56
# Mc/sec: 613.80
//
Query:       MMETSP1325-20131115|1954_1  [L=947]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-13   50.0   2.5    8.9e-08   32.0   1.5    3.5  3  PF13499.1  EF-hand domain pair
    3.3e-10   38.4   4.1    0.00075   18.5   0.0    4.0  3  PF00036.27 EF hand
    5.4e-08   31.9   5.5       0.23   11.3   0.0    4.1  3  PF13405.1  EF-hand domain
    4.5e-07   29.2   5.7     0.0057   16.1   0.1    3.7  3  PF13833.1  EF-hand domain pair
    2.4e-05   23.3   2.2       0.27   10.5   0.1    3.6  3  PF13202.1  EF hand
  ------ inclusion threshold ------
       0.39   10.3   3.5         23    4.6   0.8    2.8  2  PF12763.2  Cytoskeletal-regulatory complex EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   1.5   3.9e-11   8.9e-08       2      65 ..     481     539 ..     479     540 .. 0.93
   2 ?   -1.7   0.0       1.3     3e+03      39      55 ..     597     613 ..     569     614 .. 0.86
   3 !   13.9   0.0   1.7e-05     0.039      43      65 ..     904     926 ..     878     927 .. 0.78

  Alignments for each domain:
  == domain 1    score: 32.0 bits;  conditional E-value: 3.9e-11
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 l ++ +++D dg g++d+eeL+r l++l      +  +++ld++f + D+n+dG l + E+  a
  MMETSP1325-20131115|1954_1 481 LDRIVRTFDLDGEGKVDYEELVRSLNRL-----VGTFDQQLDFLFTMWDENNDGNLELWELSDA 539
                 567899*********************9.....6**************************9765 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 1.3
   PF13499.1  39 revldyifkelDkngdG 55 
                    l+++f++l  ng G
  MMETSP1325-20131115|1954_1 597 SSCLEALFRTLTPNGEG 613
                 5678999*******998 PP

  == domain 3    score: 13.9 bits;  conditional E-value: 1.7e-05
   PF13499.1  43 dyifkelDkngdGvlsfeEflqa 65 
                  + ++++D++ +G++++eEf+++
  MMETSP1325-20131115|1954_1 904 GEMLHDIDSDENGLITREEFRTY 926
                 44599***************987 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   3.3e-07   0.00075       2      28 ..     481     507 ..     480     508 .. 0.89
   2 !    5.0   0.1    0.0067        15       2      19 ..     516     533 ..     515     542 .. 0.81
   3 !   13.9   0.1   9.6e-06     0.022       4      26 ..     905     927 ..     903     930 .. 0.89

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 3.3e-07
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 l+++ + fD Dg Gk+++eE+++ l++
  MMETSP1325-20131115|1954_1 481 LDRIVRTFDLDGEGKVDYEELVRSLNR 507
                 7899*****************987765 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0067
                 HHHHHHHHCTTTSSEBEH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsf 19 
                 l+ +F + D ++dG +++
  MMETSP1325-20131115|1954_1 516 LDFLFTMWDENNDGNLEL 533
                 7889**********9876 PP

  == domain 3    score: 13.9 bits;  conditional E-value: 9.6e-06
                 HHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkeal 26 
                 e+   +D D +G I+ eEf+++ 
  MMETSP1325-20131115|1954_1 905 EMLHDIDSDENGLITREEFRTYA 927
                 79999**************9876 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0    0.0001      0.23       3      27 ..     482     506 ..     480     511 .. 0.86
   2 !   10.7   0.9   0.00016      0.35       2      27 ..     516     541 ..     515     549 .. 0.90
   3 !    8.9   0.0   0.00061       1.4       8      27 ..     909     928 ..     905     937 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.0001
                 H---GCC-------B---HHHHHHH CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                  ++ + fD dg Gk+d eEL++ L+
  MMETSP1325-20131115|1954_1 482 DRIVRTFDLDGEGKVDYEELVRSLN 506
                 567789**************99887 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00016
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 l  +F++ D ++dG +++ EL daL 
  MMETSP1325-20131115|1954_1 516 LDFLFTMWDENNDGNLELWELSDALE 541
                 6679********************97 PP

  == domain 3    score: 8.9 bits;  conditional E-value: 0.00061
                 CC-------B---HHHHHHH CS
   PF13405.1   8 lfDkdgdGkidaeELrdaLr 27 
                  +D d +G i++eE+r   r
  MMETSP1325-20131115|1954_1 909 DIDSDENGLITREEFRTYAR 928
                 589************98665 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   2.5e-06    0.0057      27      53 ..     481     507 ..     462     508 .. 0.89
   2 !    6.7   0.2    0.0021       4.8      24      47 ..     513     536 ..     504     543 .. 0.81
   3 !    7.4   0.0    0.0013       2.9      31      52 ..     907     928 ..     905     930 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.5e-06
   PF13833.1  27 vdilfrefDtdgdGkisfeEFcvller 53 
                 +d ++r fD+dg Gk+++eE ++ l r
  MMETSP1325-20131115|1954_1 481 LDRIVRTFDLDGEGKVDYEELVRSLNR 507
                 5889****************9998776 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0021
   PF13833.1  24 eeevdilfrefDtdgdGkisfeEF 47 
                 ++++d lf + D ++dG + + E 
  MMETSP1325-20131115|1954_1 513 DQQLDFLFTMWDENNDGNLELWEL 536
                 799**************9976665 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0013
   PF13833.1  31 frefDtdgdGkisfeEFcvlle 52 
                 ++ +D d +G i+ eEF ++ +
  MMETSP1325-20131115|1954_1 907 LHDIDSDENGLITREEFRTYAR 928
                 5557888888888888877765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   0.00012      0.27       6      23 ..     486     503 ..     481     506 .. 0.86
   2 ?   -0.9   0.0      0.48   1.1e+03       9      17 ..     524     532 ..     519     539 .. 0.80
   3 !   10.0   0.0   0.00017      0.39       7      23 ..     909     925 ..     905     927 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00012
                 HHH--S----B-HHHHHH CS
   PF13202.1   6 rafDlNgDGkIsreELkr 23 
                 r fDl+g Gk++ eEL r
  MMETSP1325-20131115|1954_1 486 RTFDLDGEGKVDYEELVR 503
                 67**************76 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.48
                 --S----B- CS
   PF13202.1   9 DlNgDGkIs 17 
                 D N+DG + 
  MMETSP1325-20131115|1954_1 524 DENNDGNLE 532
                 89****986 PP

  == domain 3    score: 10.0 bits;  conditional E-value: 0.00017
                 HH--S----B-HHHHHH CS
   PF13202.1   7 afDlNgDGkIsreELkr 23 
                  +D +  G I+reE+++
  MMETSP1325-20131115|1954_1 909 DIDSDENGLITREEFRT 925
                 79*************97 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.011        24      44      69 ..     480     505 ..     467     517 .. 0.83
   2 ?    4.6   0.8      0.01        23      47      66 ..     532     551 ..     524     565 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.011
   PF12763.2  44 klekiwdladidedgkldfeefciam 69 
                  l++i    d+d +gk+d+ee++ ++
  MMETSP1325-20131115|1954_1 480 ILDRIVRTFDLDGEGKVDYEELVRSL 505
                 478999999************98654 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.01
   PF12763.2  47 kiwdladidedgkldfeefc 66 
                 ++w+l+d  ed k df+e++
  MMETSP1325-20131115|1954_1 532 ELWELSDALEDSKDDFDEMA 551
                 69****************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (947 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.28u 0.38s 00:00:01.66 Elapsed: 00:00:00.77
# Mc/sec: 2947.21
//
Query:       MMETSP1325-20131115|1955_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 1776.43
//
Query:       MMETSP1325-20131115|1959_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-13   49.2   0.0    7.2e-13   48.8   0.0    1.0  1  PF13519.1  von Willebrand factor type A domain
     0.0014   18.2   0.0     0.0016   18.0   0.0    1.2  1  PF00092.23 von Willebrand factor type A domain
     0.0015   18.1   0.0      0.021   14.3   0.0    2.1  2  PF13768.1  von Willebrand factor type A domain
  ------ inclusion threshold ------
       0.13   11.9   0.0       0.24   11.0   0.0    1.4  1  PF08765.6  Mor transcription activator family


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   2.1e-16   7.2e-13       8     162 ..       2     179 ..       2     188 .. 0.74

  Alignments for each domain:
  == domain 1    score: 48.8 bits;  conditional E-value: 2.1e-16
   PF13519.1   8 vSgSMnaedvsptrldaakaalkdllde.lp.gdrvglvafsgs.aelvapltsdraalkaalnsldprlmpgggtnlaaalalalellakad....grraaivlvtDGedn...............ssdie.............aasalk.ragikiyvvgvgsdegaeallkelaeatggryfdassda 162
                 +SgSM+       r+ aak a+ +ll e ++  d++ ++ f+g+ ae+++p+t + a+ +  l+ +      ggg++la al+ a++   +a+     ++ ++v ++DG +n               +   e             +a++l+  +g ++  +    +  ++   ke+a+a gg+y+ +  +a
  MMETSP1325-20131115|1959_1   2 ASGSMALN-----RMNAAKGAAMSLLTEaYQsRDKICIIPFQGDyAEVLLPPTRSIAMARRRLETMPC----GGGSPLAHALNVAVRTGLNAQksgdVGKVVVVCISDGRANvplsyaaetpppaeeR---EkpdrkelkeevlaTATQLRsLQGFNLVMLDTENKFVSTGMAKEIADAAGGKYHYI-PKA 179
                 59****75.....*************99755388********9549*********************7....699999999988886654333344377788999****5555554444444333331...123334455555555666663667999999999999999999***********998.333 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   4.7e-07    0.0016       9     117 ..       3     105 ..       2     166 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 4.7e-07
                 STTS-HHHHHHHHHHHHHHHHHH.CCTTTEEEEEEEESSSEEEEE-TCCHHCCSSCGGHH-CCGGSTTS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE-----C- CS
  PF00092.23   9 SgSigeenfekvkefikkliekldigpdsvrvglvqyssdaktevslndfkskeellsavsknlkylgggtntgkALkyalenlfssaagsrenapkvvillTDGksnd 117
                 SgS+  ++++++k ++ +l+   + ++ ++ + ++ + +d  ++    +  s    ++    +    ggg+ ++ AL+ a++   +  + s    + vv+ ++DG++n 
  MMETSP1325-20131115|1959_1   3 SGSMALNRMNAAKGAAMSLLT--EAYQSRDKICIIPFQGDYAEVLLPPTR-SIAMARRR--LETMPCGGGSPLAHALNVAVRTGLNA-QKSGDVGKVVVVCISDGRANV 105
                 9********************..56************9998765555553.44444544..5677779***************7764.555555566677799**9986 PP

>> PF13768.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   6.2e-06     0.021      10     107 ..       3     101 ..       2     113 .. 0.79
   2 ?    1.6   0.0      0.05   1.7e+02      29     142 ..     136     161 ..     119     175 .. 0.63

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 6.2e-06
   PF13768.1  10 sssmsgepvelvk.daLsailrsLpprdkvnvvlf.gtearplfpgsravssaelqellqkvkeleadlGasnlegaLkealrqp...akpgearhvllls..dg 107
                 s+sm  + ++++k +a+s++ ++ ++rdk+ ++ f g++a+ l p  r++  a +      +++++   G+s l+ aL+ a+r+    +k+g + +v++++  dg
  MMETSP1325-20131115|1959_1   3 SGSMALNRMNAAKgAAMSLLTEAYQSRDKICIIPFqGDYAEVLLPPTRSIAMARR-----RLETMPC-GGGSPLAHALNVAVRTGlnaQKSGDVGKVVVVCisDG 101
                 8899999888777579*******************55688888899998886633.....6688877.9*************96666777777777777653255 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.05
   PF13768.1  29 lrsLpprdkvnvvlfgtearplfpgsravssaelqellqkvkeleadlGasnlegaLkealrqpakpgearhvlllsdgsstsgaervlqliraaarkirifalglgetlsadm 142
                   +L +   +n+v  +te +++++g                                                                                        m
  MMETSP1325-20131115|1959_1 136 ATQLRSLQGFNLVMLDTENKFVSTG----------------------------------------------------------------------------------------M 161
                 4566667777777777776666555........................................................................................3 PP

>> PF08765.6  Mor transcription activator family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     7e-05      0.24      30      57 ..     155     182 ..     127     187 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 7e-05
                 TTSHHHHHHHHHHH------------HH CS
   PF08765.6  30 eqigeevadalaahwGGqqiyiPrgvkl 57 
                 + +++ +a+++a+  GG++ yiP++ + 
  MMETSP1325-20131115|1959_1 155 KFVSTGMAKEIADAAGGKYHYIPKASES 182
                 5688999****************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 924.31
//
Query:       MMETSP1325-20131115|1957_1  [L=692]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.02u 0.35s 00:00:01.37 Elapsed: 00:00:00.57
# Mc/sec: 2859.10
//
Query:       MMETSP1325-20131115|1956_1  [L=855]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-89  298.7   0.0    8.8e-89  297.6   0.0    1.6  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  297.6   0.0   6.4e-93   8.8e-89       1     414 [.     136     627 ..     136     628 .. 0.92

  Alignments for each domain:
  == domain 1    score: 297.6 bits;  conditional E-value: 6.4e-93
                 EHHHHHHHHHHHHHHHHH----TT-E........EEEE-SSSHHHHHHHHHHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHHHHHHHHHHHCTTCTT...ECC.....S-E.ECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTS....EEEEES-TTCCHHCTTTHHHHTTT-EEEEESSCCT...T-HHHHHHHHHHCT-SEEE--HHHHHHHHHHCHC........................................CCTTTTT--EEEE-----THHHHHHHHHHTT.SEEEEEE--CGGSSESEECCS-HHH.CCH---EBSTTTEEEEEBSTT-BEE-S--.................--EEEESTTS--B-TT-HHHHHHHBCCSTTEEE---EEEE-TT--EEEE--GGGEEE--.--EEEHHHHHHHHHTSTTEE CS
  PF00501.23   1 TYreldervnrlaagLrklGvkpgdr........VaillpnspewviaflaclkaGavyvplyptlpaerlayilndseakvlitddelltklleaaskelakekliivr...tdk.....eed.svgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpdd....rvlsllplhfdgsilellaplllGatvvlvspedl...kdpalllddiekykvtvlalvptvlelllkaiek........................................kkldlsslrlilsggeplspellerlreafggirivngYGltEttgvvtvslpgdeetkpgsiGrplpgvevkivdeegkevppgev.................GEllirgpgvakGYlkdpeltaeafdedgwlyrTGDlgrldedGyleiiGRkkdqikir.GeniepgeiEsallehpgva 414
                 T++e+ e + ++++gLr+lGv+p+ +          i+ ++s+ew+ia+++++++ +v+++ y+tl+ +++  ++++ +++vl+++ + ++++l+  ++ ++ +++++ +   t +     ++  ++g ++l++ ++   +++t+ ++ p++p++la+++yTSG+TG PKGVm+ ++ l+a+v g+a ++g   ++    ++l +lpl+++++i++  +   +G +v++++p +l   ++ a    +++++k+t +a+vp v+e + ++++k                                        k +  ++l+++lsgg ++s+e++e++r a+ ++++v+gYGltEt+ ++t++ p+d+  + g +G+p++ +e+ +  e + + + g++                 GE+++rgp++++GY+k++++t+e fd dgw ++TGD+g l++ G l+i++Rkk+++k++ Ge++++++  + ++++++v+
  MMETSP1325-20131115|1956_1 136 TFAEVGELAHAFGSGLRNLGVQPQPKgagedhkgMLIYDETSAEWMIAAQGAFSQDVVVATAYATLGIDAVIKACKQGGVTVLVCNRKAVPAVLKNLAEMPTLLAIVYTDvlcTPDecesrITGpKTGPKVLSWAEVIELGKATPFEPTPPTPESLAVLMYTSGSTGDPKGVMVRQKHLVAFVGGVAIQFGALLKEgsgeVYLGYLPLAHILEIGAEVFYYSTGNAVCYADPKSLlggPERAYPHGALDEFKPTLMAGVPKVWEGIKAGAQKkveksgaaakflialaikmkataaknrmytplfnvllkkfKNTVGGRLKACLSGGGAISAEVQEWVRTAL-DCPLVQGYGLTETCAGATIQMPDDM--SIGIAGTPISSMEITLHSEPDITDAEGNPymatdtthadgkacagrGEVWLRGPNLTSGYYKMEAKTKEDFDVDGW-FHTGDIGMLTPGGALRIVDRKKNLVKLKgGEYVALEKMNTTYNNSSFVE 627
                 89*********************9998888889999****************************************************************999888877676633367766333799999999999999999999999999********************************99998888776666799***********************************955555667899***********************************************************************************************.6************************..6777777777776666665555555555555555579999999999******************************.***************************66***************99995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (855 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.28u 0.35s 00:00:01.63 Elapsed: 00:00:00.84
# Mc/sec: 2439.15
//
Query:       MMETSP1325-20131115|1958_1  [L=485]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-43  147.1   0.0    9.7e-43  145.9   0.0    1.6  1  PF01031.15 Dynamin central region
      9e-19   67.0   0.4    2.6e-18   65.6   0.2    1.8  1  PF02212.13 Dynamin GTPase effector domain


Domain annotation for each model (and alignments):
>> PF01031.15  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.9   0.0   1.4e-46   9.7e-43      55     289 ..       1     249 [.       1     257 [. 0.87

  Alignments for each domain:
  == domain 1    score: 145.9 bits;  conditional E-value: 1.4e-46
                 GGXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTXXXXXXXXXXXXXXX-HHHHH.HHHHHHHHHHHHHHHHHH....H------..........------HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-----------TTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH.HHTTSHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHT.S----------------- CS
  PF01031.15  55 ercgtpyLakkLnkeLvehIrksLPdlkeqinkklqetekeLekyGesvpedeeek.lalllelitkFsedfksl....ieGeedkel........stkelsggariryiFnelfekllkkldpleklsdeeirtairnsrGrelplFvpekaFellvkkqikrLeepalkcvelvyeelekivkkvlsk.elkrfpnLkeeikevvedllreqleeteklvenlidmelayintnhpdflkalqavke 289
                 +++gt +L++  +k+L+ehI+++LP+l + i ++++e+++eL++yG+s pe   +k  ++l+++ ++Fs  ++      +eG +++e         st  lsgg+ri+ i++++f+++l ++d++  +  ++++ ++rn++G    lF+p++aF  lvk  i++L++p+l++v+ v++el  i+++  +  +l+ +p+Lk+++ +v++ ++++q + t +lv+++++me++ in  hpdfl++ + v +
  MMETSP1325-20131115|1958_1   1 HKLGTAFLVEACSKMLMEHIQNTLPTLAAGIARLIEEKQAELDSYGDSSPEVLRRKlISCLVKVSRRFSGLLSGAdlgpLEGAAEEEKdggvaigsSTGLLSGGSRIEGILTTVFAQTLGEVDVTGAMDPKDVQAVVRNAKGLGGGLFTPDEAFLKLVKSAISKLRKPSLEVVSSVHTELLTIARTATDLhTLRDYPELKKAVMQVLTGVIQKQHDATADLVKTILAMETNRINIHHPDFLGEGRSVID 249
                 579***********************************************54333314566666666666665543344566555422455677879999**************************************************************************************555589*************************************************98776555 PP

>> PF02212.13  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.2   3.7e-22   2.6e-18       2      91 ..     367     456 ..     366     457 .. 0.98

  Alignments for each domain:
  == domain 1    score: 65.6 bits;  conditional E-value: 3.7e-22
  PF02212.13   2 eaieieeiklllksYfdivrkniedqvPkaImhflvnetkeelqnellrkLykeelleelLqEddevaekRkelkerlevLkqAlrilde 91 
                 e++e+e i  l++sYf+ivrk+i d vPka+ + +v+et  +l+ +ll++L ++e++++l++ ++e++++ ++++e+l++L++A+ +l e
  MMETSP1325-20131115|1958_1 367 EKVEVEAILFLVESYFSIVRKSIGDYVPKAVALKFVEETTTDLEINLLTELDHQETIDRLMSTSPEIQQRIASISETLKLLREANAVLXE 456
                 899**********************************************************************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       508  (0.0371562); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.31s 00:00:01.20 Elapsed: 00:00:00.56
# Mc/sec: 2075.42
//
Query:       MMETSP1325-20131115|1960_1  [L=479]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-45  154.4  15.2    1.7e-33  115.4   5.1    2.1  2  PF00520.26 Ion transport protein
    0.00037   18.9  18.5      0.016   13.5   3.4    3.1  3  PF08016.7  Polycystin cation channel


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.7   1.9e-15   1.3e-11     130     199 .]      88     168 ..      34     168 .. 0.88
   2 !  115.4   5.1   2.6e-37   1.7e-33       2     170 ..     266     434 ..     265     453 .. 0.93

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 1.9e-15
                 -S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX................XXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  PF00520.26 130 kagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatl...........ragskigyiyfvifiilgsflllnlliavi 199
                  +++ ++ g+ +fd++++ + +l  + t+egw+d+m a++           +a+ +   +yfv+f+++g f+ + l+++v+
  MMETSP1325-20131115|1960_1  88 GESKWNQVGTLHFDNIFYGMACLYEISTTEGWVDVMFAAInsrgidmqpvrNANVVAPLVYFVLFMLIGCFFCMELFVGVV 168
                 55667889999***************************************99999999*********************97 PP

  == domain 2    score: 115.4 bits;  conditional E-value: 2.6e-37
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX............. CS
  PF00520.26   2 leyvftiiftlemllkiialgfklkftylrdpwnilDflvvlpslvslilrllnkas..gllavlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvkekagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatl..........r 170
                 +++vf++if +e ++k++a g+   ++y+ d wn++D +++++++++l++++   +s  ++ + lr++r++R++r+++ +++l+ ++ ++++++++l n l+l+ +v+f+f++++v lf++ + ++           n++ nf++ g ++ltlfr  tge+w+  m++++          +
  MMETSP1325-20131115|1960_1 266 ANLVFVGIFSFELVVKVLASGV---HSYCLDNWNLFDAFIMFVTYFDLAAASIIPKSmsSITSKLRIFRLFRFVRIIRKNKTLNDMWETFVTALPSLWNALVLISLVFFVFGVLAVKLFAKVALND---------DLNSHANFQNLGFSLLTLFRFSTGENWNGFMHSVMdqpdgcevdpE 434
                 689******************9...9************************99887779988899**********************************************************9988.........68*******************************9977666555544 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.4   0.00044         3     393     425 ..     141     174 ..     117     175 .. 0.81
   2 !    9.4   0.8     4e-05      0.27     191     258 ..     239     308 ..     229     311 .. 0.77
   3 !   13.5   3.4   2.3e-06     0.016     283     380 ..     306     411 ..     304     422 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00044
   PF08016.7 393 rvLGp.llfltlvflvifillnlflavindsyee 425
                 +v  p ++f++++++ +f  ++lf+ v+ d++++
  MMETSP1325-20131115|1960_1 141 NVVAPlVYFVLFMLIGCFFCMELFVGVVIDNFNK 174
                 4445505678889999999************997 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 4e-05
   PF08016.7 191 psvsvqsvkLlrfvtklsl..elllieiiflvfvlyfvveevlkirkeg.asylrsvwnlldlaivvlsvv 258
                 +++ +++v+++  + ++ +  +  l e++ lvfv  f +e v+k+  +g  sy  + wnl d++i+ ++++
  MMETSP1325-20131115|1960_1 239 ATIMLNAVTMAAEFYGMPTwyRSSL-ELANLVFVGIFSFELVVKVLASGvHSYCLDNWNLFDAFIMFVTYF 308
                 5556666666655555543113334.88999******************999999**********999875 PP

  == domain 3    score: 13.5 bits;  conditional E-value: 2.3e-06
   PF08016.7 283 dFldFrevarldqllriilavllflvllkllkvlrfnktlslftktlsralkellgfalvivilllayaqlgvllfg........sqvdnfsnlvksiltlfrlll 380
                 ++ d+ +++ + + +  i+  l ++ l ++++++r nktl+ + +t   al+ l  + ++i++++++++ l+v lf         + ++nf+nl  s+ltlfr   
  MMETSP1325-20131115|1960_1 306 TYFDLAAASIIPKSMSSITSKLRIFRLFRFVRIIRKNKTLNDMWETFVTALPSLWNALVLISLVFFVFGVLAVKLFAkvalnddlNSHANFQNLGFSLLTLFRFST 411
                 788999999999999999999999999********************************************99999833333333457889999999999987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       540  (0.0394968); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.83u 0.38s 00:00:01.21 Elapsed: 00:00:00.69
# Mc/sec: 1663.56
//
Query:       MMETSP1325-20131115|1961_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-18   67.4   0.0    2.1e-18   66.5   0.0    1.4  2  PF00617.14 RasGEF domain
  ------ inclusion threshold ------
      0.085   12.5   0.0       0.18   11.4   0.0    1.6  2  PF11472.3  Protein of unknown function (DUF3206)


Domain annotation for each model (and alignments):
>> PF00617.14  RasGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   0.0   3.1e-22   2.1e-18      59     188 .]       2     144 ..       1     144 [. 0.83
   2 ?   -3.0   0.0      0.64   4.4e+03      32      58 ..     178     204 ..     160     211 .. 0.62

  Alignments for each domain:
  == domain 1    score: 66.5 bits;  conditional E-value: 3.1e-22
  PF00617.14  59 wvaseilleeklkkRakllkkfIkiakecrelkNfnsllaIisgLnssavsRLkktwekvsskskklfedleelmsp..srnfkkyreala......klspepciPflglllkdLtfieegnpdtvegg......linfeKlrk 188
                 +++sei+++e+l +R+ +++ +I++a+ c e++N+ s++ I++ L  + ++RL  tw +v++ +   fe l+++++p  +rn k+  + ++      ++ p pc P +  +++ L ++  + + + + +      linf+++r+
  MMETSP1325-20131115|1961_1   2 VLVSEIIKCEELGDRVFVVRLLIRVAELCFEMNNYDSAMIIMAVLADTCIQRLGDTWHEVERIYPGHFEALKRVLNPgeQRNSKNSERQAEyslhklSADP-PCMPAMAYVVSSLKYLGSKDSWFSDFPadnavgLINFDRMRR 144
                 5799**********************************************************************955224566666433334455444555.*****************9988444444444677******996 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 0.64
  PF00617.14  32 vwgkkdkkgkkspnveafvrrfnelsr 58 
                  w +++k +++s++ve+  + +n + +
  MMETSP1325-20131115|1961_1 178 QWVDEEKAWHQSQRVERKRKSINPTPH 204
                 455555555566666666666665555 PP

>> PF11472.3  Protein of unknown function (DUF3206)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.74     5e+03      72      84 ..      34      46 ..      26      76 .. 0.62
   2 ?   11.4   0.0   2.7e-05      0.18      35      65 ..     162     192 ..     139     206 .. 0.87

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.74
   PF11472.3 72 enyddveelkdel 84
                +nyd++  ++  l
  MMETSP1325-20131115|1961_1 34 NNYDSAMIIMAVL 46
                5555554444433 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 2.7e-05
   PF11472.3  35 istfdpivlkimekepdwleeavaglqslvv 65 
                 ++++d  +l+ m  ep+w++e  a+ qs  v
  MMETSP1325-20131115|1961_1 162 FTKLDQTLLALMLVEPQWVDEEKAWHQSQRV 192
                 56789999*******************9766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 990.80
//
Query:       MMETSP1325-20131115|1964_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 540.36
//
Query:       MMETSP1325-20131115|1965_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 483.79
//
Query:       MMETSP1325-20131115|1966_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.70
# Mc/sec: 195.13
//
Query:       MMETSP1325-20131115|1969_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-06   25.4   0.1      3e-05   23.0   0.0    2.4  2  PF13202.1  EF hand
    4.4e-05   22.3   0.0    0.00017   20.5   0.0    2.1  1  PF00036.27 EF hand
    0.00042   19.7   0.4     0.0032   16.9   0.2    2.3  2  PF13833.1  EF-hand domain pair
    0.00044   20.2   0.2     0.0022   17.9   0.2    2.1  2  PF13499.1  EF-hand domain pair
     0.0011   18.5   1.1     0.0076   15.9   0.0    3.0  3  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.066   12.7   0.0       0.13   11.8   0.0    1.4  1  PF02734.12 DAK2 domain


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   1.3e-08     3e-05       2      24 ..      13      35 ..      11      37 .. 0.88
   2 ?   -2.1   0.1       1.2   2.6e+03      12      16 ..     280     284 ..     280     285 .. 0.88

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 1.3e-08
                HHHHHHH--S----B-HHHHHHH CS
   PF13202.1  2 kdtFrafDlNgDGkIsreELkrl 24
                +++F ++D+N DG I++eE+ ++
  MMETSP1325-20131115|1969_1 13 EALFHQYDTNSDGNIDAEEYLEM 35
                689****************9775 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.2
                 ----B CS
   PF13202.1  12 gDGkI 16 
                 gDGk+
  MMETSP1325-20131115|1969_1 280 GDGKL 284
                 8***8 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   7.4e-08   0.00017       2      26 ..      12      36 ..      11      39 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 7.4e-08
                HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkeal 26
                ++ +F  +D++ dG I+ eE++e++
  MMETSP1325-20131115|1969_1 12 VEALFHQYDTNSDGNIDAEEYLEMV 36
                5789*******************97 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.2   1.4e-06    0.0032      22      52 ..       7      37 ..       2      39 .. 0.91
   2 ?   -0.2   0.0       0.3   6.9e+02       1      13 [.     183     195 ..     183     198 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.4e-06
   PF13833.1 22 lseeevdilfrefDtdgdGkisfeEFcvlle 52
                ++e+ v++lf+  Dt+ dG i+ eE++++++
  MMETSP1325-20131115|1969_1  7 VTEDLVEALFHQYDTNSDGNIDAEEYLEMVV 37
                799************************9987 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.3
   PF13833.1   1 ekGlItreeLkra 13 
                 ++G++t+++++ a
  MMETSP1325-20131115|1969_1 183 KTGCLTKQAFSAA 195
                 58********987 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.2   9.7e-07    0.0022      38      65 ..       8      35 ..       3      36 .. 0.91
   2 ?   -2.5   0.0       2.3   5.2e+03      14      30 ..     184     200 ..     183     226 .. 0.72

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 9.7e-07
   PF13499.1 38 vrevldyifkelDkngdGvlsfeEflqa 65
                ++++++++f+++D+n dG ++ eE+l++
  MMETSP1325-20131115|1969_1  8 TEDLVEALFHQYDTNSDGNIDAEEYLEM 35
                678999*******************998 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.3
   PF13499.1  14 dgyldkeeLlrllkhlg 30 
                 +g l+k+ + ++   + 
  MMETSP1325-20131115|1969_1 184 TGCLTKQAFSAAVEEWK 200
                 67888888877766554 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   3.4e-06    0.0076       3      23 ..      13      33 ..      11      44 .. 0.87
   2 ?   -1.2   0.0       1.1   2.4e+03       2      15 ..      51      64 ..      50      68 .. 0.80
   3 ?   -3.2   0.1       4.5     1e+04       2       8 ..     128     134 ..     127     134 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 3.4e-06
                H---GCC-------B---HHH CS
   PF13405.1  3 reaFklfDkdgdGkidaeELr 23
                +++F+++D++ dG idaeE +
  MMETSP1325-20131115|1969_1 13 EALFHQYDTNSDGNIDAEEYL 33
                689***************966 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 1.1
                HH---GCC------ CS
   PF13405.1  2 lreaFklfDkdgdG 15
                + +aFk + + ++G
  MMETSP1325-20131115|1969_1 51 MDSAFKFLTNANSG 64
                6799**99777777 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 4.5
                 HH---GC CS
   PF13405.1   2 lreaFkl 8  
                 +++aF++
  MMETSP1325-20131115|1969_1 128 FNDAFRM 134
                 8999986 PP

>> PF02734.12  DAK2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   5.6e-05      0.13      24      70 ..     159     204 ..     151     224 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 5.6e-05
  PF02734.12  24 eleeeadlaevlkaiakallskagGtsGvlysqflraaakalkekee 70 
                 e+  +a+l+++l ++ ++++ + gG  G l  q+++aa +++k++e+
  MMETSP1325-20131115|1969_1 159 ES-TNASLKSMLGTVDNIAQWTGGGKTGCLTKQAFSAAVEEWKQREQ 204
                 44.7999***********************************99776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.63
# Mc/sec: 1182.96
//
Query:       MMETSP1325-20131115|1967_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-31  109.3   0.7    2.3e-31  109.0   0.5    1.1  1  PF00654.15 Voltage gated chloride channel
    3.5e-21   74.5   0.3    1.2e-11   44.0   0.0    2.4  2  PF00571.23 CBS domain
  ------ inclusion threshold ------
      0.062   12.1   1.6        0.1   11.4   1.1    1.2  1  PF04123.8  Domain of unknown function (DUF373)
        4.4    6.5  13.4      0.042   13.0   1.0    2.7  3  PF07694.7  5TMR of 5TMR-LYT


Domain annotation for each model (and alignments):
>> PF00654.15  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.0   0.5   6.6e-35   2.3e-31     163     354 ..       2     256 ..       1     257 [. 0.80

  Alignments for each domain:
  == domain 1    score: 109.0 bits;  conditional E-value: 6.6e-35
                 GHHHHHH----------CCCHHHHHHHHHHHCH-CHHHHHHH.-----------TTTSSCC..C-----TC.........................................................HHHHCTS---HHHHHH...HHHHHHHHHHHHHT-------HHHHHH-HHHHHHHHHHHHHHH-C.............TSST...HHCCC-----HHHHCCS-CCHHHHHHHHCC--GCCHHHHHHHHHHHHHHHC CS
  PF00654.15 163 elilfvllGilgGllGalFvrlllkveklfrklkklkvpkrl.epalvglltgllalllpansvlgggyal.........................................................lasllsgstlllsllllllllvlkllataltlgsglpgGifvPsLviGAalGrlvglvlallfp.............gdassdpgayaliGaaaflagvtrapltaivilfEltgslelllplmlavaiAklvad 354
                 el+lf++lG+lgG+lGalF++l   ++ +++k   l+ +  +  ++ ++l+t++l ++l    +l+ ++ +                                                         +++ll++ ++ +   ll+++l++ + +++l +g+++p+G+f+P++ +G + G+l+g ++ ++ +             +d  +  + +al+Ga+a+l+g++r +l+++vi++E tg++++l+p++++++i++++++
  MMETSP1325-20131115|1967_1   2 ELPLFAMLGVLGGMLGALFNYLWE-AKMQRHKA--LPPKTKFmVIMGASLFTSSLLYFLTF--ILQDHSCAekdnfrsrdddttiddvtdddnvevvddkdfwlefgcnnanqtnvlasvffqsrevvIKKLLED-AKSFDTSLLVVMLIAFFPLMVLGFGLAIPTGVFMPTILVGCIGGALFGKIVIHFKSmdhdhdgylsslnNDRIC--NHMALVGAVALLGGIQRSTLSLCVIIMEGTGQVQMLIPIIITTVISRYFGN 256
                 89******************9755.44344443..33332332444445667777777644..555555445888889999999999999999999999999999999999999998888888888877777755.347888899999999999******************************98888834455566666666666666..68********************************************99875 PP

>> PF00571.23  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   3.4e-15   1.2e-11       2      56 ..     289     343 ..     288     344 .. 0.95
   2 !   28.4   0.1   2.5e-10   8.5e-07       3      55 ..     411     463 ..     409     465 .. 0.95

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 3.4e-15
                 HHHCCSSCCEEETTSBHHHHHHHHHHHTTSEEEEEEETTEB---EEHHHHHHHHH CS
  PF00571.23   2 gdlmtkdvvtvppdetlsealeilrktgvsrlpVvDedgrlvGiitlrDllkall 56 
                  d+m+++vvt++p e+++ +l+ lr   ++++pVv  +g+l+G+i++++l  +l+
  MMETSP1325-20131115|1967_1 289 CDVMQPNVVTLTPLESVGNILNALRHCTHNGFPVVTSGGNLCGVILRSQLRMLLK 343
                 69************************************************98886 PP

  == domain 2    score: 28.4 bits;  conditional E-value: 2.5e-10
                 HHCCSSCCEEETTSBHHHHHHHHHHHTTSEEEEEEETTEB---EEHHHHHHHH CS
  PF00571.23   3 dlmtkdvvtvppdetlsealeilrktgvsrlpVvDedgrlvGiitlrDllkal 55 
                 ++m+  +++v  + +ls+a +++++ g ++l+V D  g++vGi+t++Dl+ ++
  MMETSP1325-20131115|1967_1 411 RIMNQGPHVVLDTCPLSRAYSLFISVGLRHLVVLDTTGQVVGILTRKDLVGLM 463
                 79********************************999************9765 PP

>> PF04123.8  Domain of unknown function (DUF373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.1   2.9e-05       0.1     149     328 ..     125     303 ..     119     313 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.9e-05
   PF04123.8 149 lkkalsdpeisrtilgvpGlllliyallallnl....savalavillilGlyllvkGlglddllrellkrvrealyegritfityvvslililvgiisgylsleklskasalvvvalfllaivpwlalaaliailgklideylekeerllkdllaiffllaialvvyglskylleaalaltsls 328
                 +kk+l+d +   t l v  l++++  +++ ++l      ++ +++++++G++l+ k +   + +++    + ++l++ ri   +++v+++ +l gi  ++lsl  +  + +++v       ++p++++ ++  ++g+l+ e l++    lk +  +   +a  + ++ +  ++  + ++lt l+
  MMETSP1325-20131115|1967_1 125 IKKLLEDAKSFDTSLLVVMLIAFFPLMVLGFGLaiptGVFMPTILVGCIGGALFGKIVIHFKSMDHDHDGYLSSLNNDRICNHMALVGAVALLGGIQRSTLSLCVIIMEGTGQV-----QMLIPIIITTVISRYFGNLFTEGLYEIGLHLKHVPFLHNHIAHQYYMMRVCDVMQPNVVTLTPLE 303
                 69*****999999994444444333333334447776888889999*******************************************************8877766666665.....45789999999999999999999998888888888888888888888888888888776666655 PP

>> PF07694.7  5TMR of 5TMR-LYT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.2     0.034   1.2e+02      87     133 ..      11      57 ..       5      65 .. 0.62
   2 ?   13.0   1.0   1.2e-05     0.042     125     167 ..     141     183 ..     114     185 .. 0.84
   3 ?   -2.6   0.4      0.75   2.6e+03      79      86 ..     234     241 ..     207     264 .. 0.46

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.034
   PF07694.7  87 istilagllagliyrklkrrrktltpvvalligliveilqmliilll 133
                 +   + g+l+ ++++ +++r+k l p + +++ + + +++  ++++l
  MMETSP1325-20131115|1967_1  11 VLGGMLGALFNYLWEAKMQRHKALPPKTKFMVIMGASLFTSSLLYFL 57 
                 33344555666666666666688888888877777777766555554 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.2e-05
   PF07694.7 125 lqmliilllakpfkealalvkvialpmilvnslgialflsilk 167
                 + mli ++ ++    +la+   + +p+ilv ++g+alf++i+ 
  MMETSP1325-20131115|1967_1 141 VVMLIAFFPLMVLGFGLAIPTGVFMPTILVGCIGGALFGKIVI 183
                 348888877778888888888*******************986 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 0.75
   PF07694.7  79 gftaiacg 86 
                 g+ ++ ++
  MMETSP1325-20131115|1967_1 234 GTGQVQML 241
                 22222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       592  (0.0433002); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.41s 00:00:01.25 Elapsed: 00:00:00.57
# Mc/sec: 2098.88
//
Query:       MMETSP1325-20131115|1968_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-12   44.4   3.3    2.4e-11   43.1   2.3    1.6  1  PF01545.16 Cation efflux family


Domain annotation for each model (and alignments):
>> PF01545.16  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   2.3   1.8e-15   2.4e-11       2     185 ..       7     223 ..       6     229 .. 0.90

  Alignments for each domain:
  == domain 1    score: 43.1 bits;  conditional E-value: 1.8e-15
  PF01545.16   2 iialllnlllalvelivglltnSlallaDafhslsdaislvlalvavrlaskppdkkfpF..Glgrlevlgalvnsvlllflavfillesierliep........................heidapeialgvalisllvnlllalllrragrk..............sskrssalravalhvlgdalgslgvlvaallilftglnl..ylDpilsllialiilyt 185
                 + a +l+ +++++++i++ ++nS al aD + + +d+++ +  l+a    +      +pF     ++e  ++ ++  lllf+ +  ++e++   +                           e  +++i+lg al +l++ l++++ ++ +g k               +++++++ a++lhv +d+  s ++ + +++il ++ ++  ++D   +l+++ ii++ 
  MMETSP1325-20131115|1968_1   7 LTAAVLFAVITATQWIFADIANSDALKADCISMGVDVLAFLGNLFA----EC-----NPFpdQKRKVELTMSGISHFLLLFFTIQFIIEGYGDATAKvsddcddfvngtkythdddesgcgGEEVNGYIVLGFALGGLAFDLISLITYKYYGTKksdeelavdgedaiTCGINTNMCAALLHVVSDLARSTTTFIESIVILCVPTIPstTADGYSTLVVCGIIVIG 223
                 5678889999*********************999998776666665....55.....77777999************************8888888888899999999************9888888888888*****************9998899999999999**999********************************8888999************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       517  (0.0378145); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.43s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 1108.32
//
Query:       MMETSP1325-20131115|1970_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.2e-33  113.2   0.0    1.2e-32  112.6   0.0    1.2  1  PF08264.8 Anticodon-binding domain of tRNA


Domain annotation for each model (and alignments):
>> PF08264.8  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.6   0.0   9.1e-37   1.2e-32       1     152 [.      32     184 ..      32     185 .. 0.91

  Alignments for each domain:
  == domain 1    score: 112.6 bits;  conditional E-value: 9.1e-37
   PF08264.8   1 drwilselnklikevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaeds.rr.aqtvlaevletllrllaPfmPfltEelwqrl....eeellgkkesimlaewPe.dseel.eeeleeeevellkeivkairklrselkikpsselkvv 152
                 d++il ++ +l++ev++a+++y+f +a +al  f++ dl+++yl+++k+rly ++a+d+ rr +qtvl+ +le + +++aP++P+++E++w +l     +      +s++   w e d+  +  e + ++ + l+++++ka++ +r++++i+ s++ +v 
  MMETSP1325-20131115|1970_1  32 DKYILGRYTELVAEVSDAFASYQFFRASQALLRFATADLSSFYLDIAKDRLYISAADDArRRsCQTVLKVILEGMAKMMAPILPHMAEDIWLNLpydvPC------KSVFQDGWAEaDYPSHqAERW-AKVLLLRDDVNKAMELARAKKTIGASLDSRVR 184
                 89*****************************************************9999*999****************************777776544......679999999877766665555.889999********************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.48s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1466.57
//
Query:       MMETSP1325-20131115|1971_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   10.9   0.1       0.17   10.5   0.1    1.1  1  PF11884.3 Domain of unknown function (DUF3404)


Domain annotation for each model (and alignments):
>> PF11884.3  Domain of unknown function (DUF3404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   1.3e-05      0.17      97     116 ..      21      40 ..      18      48 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 1.3e-05
   PF11884.3  97 tkLsaeWFsrsgliHPgGGs 116
                 ++Ls+ W   s+ iHPgG s
  MMETSP1325-20131115|1971_1  21 KSLSKGWMGSSAAIHPGGES 40 
                 79***************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 474.17
//
Query:       MMETSP1325-20131115|1972_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-13   47.9   0.0    0.00045   19.2   0.0    3.3  3  PF00036.27 EF hand
    3.4e-11   41.9   0.4      0.013   15.1   0.0    3.3  3  PF13405.1  EF-hand domain
      9e-10   37.3   0.5    1.8e-05   23.7   0.0    3.2  3  PF13202.1  EF hand
    1.7e-09   37.0   0.3    0.00011   21.6   0.0    3.2  3  PF13833.1  EF-hand domain pair
    4.1e-09   36.3   0.0    2.4e-06   27.4   0.0    2.6  2  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   4.3e-05      0.12       5      24 ..       2      21 ..       1      25 [. 0.91
   2 !   13.4   0.0   1.2e-05     0.031       5      26 ..      39      60 ..      36      61 .. 0.89
   3 !   19.2   0.0   1.6e-07   0.00045       3      26 ..      91     114 ..      89     116 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.3e-05
                HHHHHCTTTSSEBEHHHHHH CS
  PF00036.27  5 aFkefDkDgdGkIsfeEfke 24
                +F+++D+ ++G + fe f+ 
  MMETSP1325-20131115|1972_1  2 VFDLLDTTKSGSLPFEQFCV 21
                7*****************96 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 1.2e-05
                HHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  5 aFkefDkDgdGkIsfeEfkeal 26
                +F+ fD+D++G++  + + e+l
  MMETSP1325-20131115|1972_1 39 LFATFDTDRSGFLGPDHLAELL 60
                69***********999988875 PP

  == domain 3    score: 19.2 bits;  conditional E-value: 1.6e-07
                 HHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfkeal 26 
                 + a + fD D+dGk+s +Ef ++ 
  MMETSP1325-20131115|1972_1  91 QTALSRFDADRDGKLSSKEFAAFA 114
                 568899**************9875 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00011      0.29       5      23 ..       2      20 ..       1      27 [. 0.91
   2 !   12.7   0.0     3e-05     0.083       5      26 ..      39      60 ..      35      69 .. 0.88
   3 !   15.1   0.0   4.9e-06     0.013       7      27 ..      95     115 ..      90     121 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00011
                --GCC-------B---HHH CS
   PF13405.1  5 aFklfDkdgdGkidaeELr 23
                +F+l+D++++G + +e++ 
  MMETSP1325-20131115|1972_1  2 VFDLLDTTKSGSLPFEQFC 20
                8**************9995 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 3e-05
                --GCC-------B---HHHHHH CS
   PF13405.1  5 aFklfDkdgdGkidaeELrdaL 26
                +F  fD+d++G++  + L  +L
  MMETSP1325-20131115|1972_1 39 LFATFDTDRSGFLGPDHLAELL 60
                79************99998876 PP

  == domain 3    score: 15.1 bits;  conditional E-value: 4.9e-06
                 GCC-------B---HHHHHHH CS
   PF13405.1   7 klfDkdgdGkidaeELrdaLr 27 
                   fD d+dGk++ +E+ ++ +
  MMETSP1325-20131115|1972_1  95 SRFDADRDGKLSSKEFAAFAQ 115
                 57**************98765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.044   1.2e+02       4      15 ..       2      13 ..       1      14 [. 0.87
   2 !    8.2   0.0   0.00053       1.5       5      16 ..      40      51 ..      37      60 .. 0.87
   3 !   23.7   0.0   6.8e-09   1.8e-05       4      24 ..      93     113 ..      89     114 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.044
                HHHHH--S---- CS
   PF13202.1  4 tFrafDlNgDGk 15
                +F+ +D+ ++G 
  MMETSP1325-20131115|1972_1  2 VFDLLDTTKSGS 13
                69********97 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00053
                HHHH--S----B CS
   PF13202.1  5 FrafDlNgDGkI 16
                F  fD++++G++
  MMETSP1325-20131115|1972_1 40 FATFDTDRSGFL 51
                899*******98 PP

  == domain 3    score: 23.7 bits;  conditional E-value: 6.8e-09
                 HHHHH--S----B-HHHHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELkrl 24 
                 ++++fD+++DGk+s +E+ ++
  MMETSP1325-20131115|1972_1  93 ALSRFDADRDGKLSSKEFAAF 113
                 5899**************987 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0018       4.8      30      50 ..       2      22 ..       1      23 [. 0.92
   2 !    5.3   0.0    0.0047        13      30      41 ..      39      50 ..      31      54 .. 0.88
   3 !   21.6   0.0   3.9e-08   0.00011      28      53 ..      91     116 ..      88     117 .. 0.90

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0018
   PF13833.1 30 lfrefDtdgdGkisfeEFcvl 50
                +f+++Dt ++G + fe Fcv 
  MMETSP1325-20131115|1972_1  2 VFDLLDTTKSGSLPFEQFCVG 22
                69*****************85 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.0047
   PF13833.1 30 lfrefDtdgdGk 41
                lf  fDtd++G 
  MMETSP1325-20131115|1972_1 39 LFATFDTDRSGF 50
                899*******95 PP

  == domain 3    score: 21.6 bits;  conditional E-value: 3.9e-08
   PF13833.1  28 dilfrefDtdgdGkisfeEFcvller 53 
                 ++ ++ fD+d+dGk+s +EF ++ ++
  MMETSP1325-20131115|1972_1  91 QTALSRFDADRDGKLSSKEFAAFAQS 116
                 778999***************99886 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0038        10      46      63 ..       3      20 ..       1      23 [. 0.84
   2 !   27.4   0.0   8.8e-10   2.4e-06       4      65 ..      38     113 ..      33     114 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0038
   PF13499.1 46 fkelDkngdGvlsfeEfl 63
                f+ lD+ ++G l fe f+
  MMETSP1325-20131115|1972_1  3 FDLLDTTKSGSLPFEQFC 20
                888999999999999998 PP

  == domain 2    score: 27.4 bits;  conditional E-value: 8.8e-10
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgsels..............deevrevldyifkelDkngdGvlsfeEflqa 65 
                  +F ++D+d++g+l ++ L +ll   +                  +  ++ +++  + ++D ++dG+ls  Ef+++
  MMETSP1325-20131115|1972_1  38 LLFATFDTDRSGFLGPDHLAELLLVVSVAADgpgdvspgrtadmyRPLLDMMAQTALSRFDADRDGKLSSKEFAAF 113
                 47*********************99998877*9999988888887777777**********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 614.91
//
Query:       MMETSP1325-20131115|1976_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.073   12.6   0.0        1.3    8.5   0.0    2.0  2  PF13768.1 von Willebrand factor type A domain
        0.1   11.1   0.3       0.19   10.2   0.2    1.4  1  PF08926.6 Domain of unknown function (DUF1908)


Domain annotation for each model (and alignments):
>> PF13768.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0    0.0085        58       5      36 ..      17      48 ..      16      51 .. 0.88
   2 ?    8.5   0.0   0.00019       1.3      55     144 ..      48     132 ..      42     136 .. 0.84

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.0085
   PF13768.1  5 ivvDvsssmsgepvelvkdaLsailrsLpprd 36
                iv+ vs   +g + el+++++s++  s+ +++
  MMETSP1325-20131115|1976_1 17 IVIGVSKEKHGVKEELAAELISFMYNSFLKGV 48
                8999********************99876665 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00019
   PF13768.1  55 ravssaelqellqkvkeleadlGasnlegaLkealrqpakpgearhvlllsdgsstsgaervlqliraaarkirifalglgetlsadmlq 144
                 ++++ +e + ++++vk+ + ++Gas + ++ + + r+   + ++r+++ ++dg s      +l  +r ++++i +    ++++ ++++++
  MMETSP1325-20131115|1976_1  48 VTLDWSEFDLVNKAVKTTDDSSGASSVVSSQENTPRS--NQLSPRRIIDVTDGAS---LPNTLTRVRGEKAAINFDNELFMSQFDEHLQE 132
                 66677778889*******************9999996..688************4...45679999999999999999999988877654 PP

>> PF08926.6  Domain of unknown function (DUF1908)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.2   2.8e-05      0.19      75     142 ..      55     122 ..      47     145 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 2.8e-05
   PF08926.6  75 lkllskhfrsaesvkdedgr.rspvlrprsrslspsrssitfdneivlmntvykerfpkataqmeerlk 142
                   l+ k ++++++ +   +   s    prs  lsp r   +  +  +l nt+ + r  ka+ + ++ l 
  MMETSP1325-20131115|1976_1  55 FDLVNKAVKTTDDSSGASSVvSSQENTPRSNQLSPRRIIDV-TDGASLPNTLTRVRGEKAAINFDNELF 122
                 566777777777666665541556789********998877.567899************988887774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|1977_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0049   16.5   0.1     0.0065   16.1   0.1    1.2  1  PF03920.10 Groucho/TLE N-terminal Q-rich domain
  ------ inclusion threshold ------
      0.015   15.1   2.6      0.015   15.1   1.8    2.1  2  PF00170.16 bZIP transcription factor
      0.018   14.8  10.4      0.024   14.4   4.1    2.0  2  PF11559.3  Afadin- and alpha -actinin-Binding
      0.024   14.5   5.0      0.031   14.2   0.5    2.3  2  PF03980.9  Nnf1
      0.026   14.5   3.7      0.084   12.9   2.6    1.7  2  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
      0.034   13.3   1.6      0.043   12.9   1.1    1.1  1  PF08961.5  Domain of unknown function (DUF1875)
      0.055   11.9   2.1      0.059   11.9   1.5    1.1  1  PF08317.6  Spc7 kinetochore protein
      0.072   12.7   3.4      0.096   12.3   2.2    1.3  1  PF06102.7  Domain of unknown function (DUF947)
      0.093   13.0   2.0       0.46   10.7   0.3    2.0  2  PF09177.6  Syntaxin 6, N-terminal
      0.095   11.7   4.6       0.11   11.5   3.2    1.2  1  PF12072.3  Domain of unknown function (DUF3552)
       0.11   12.7   1.5       0.15   12.2   1.1    1.2  1  PF03234.9  Cdc37 N terminal kinase binding
       0.26   11.0   3.1       0.73    9.6   2.2    1.7  1  PF09074.5  Mer2
       0.35   10.5   3.1        2.1    7.9   1.8    2.5  2  PF02183.13 Homeobox associated leucine zipper
       0.36   10.2   6.5       0.19   11.1   1.8    2.3  2  PF04977.10 Septum formation initiator
       0.45   10.5   4.1       0.39   10.7   1.3    1.8  1  PF13747.1  Domain of unknown function (DUF4164)
        0.5    9.0   6.0       0.35    9.5   2.1    1.8  2  PF02646.11 RmuC family
       0.64   10.2   4.6        2.6    8.3   3.2    1.9  1  PF06156.8  Protein of unknown function (DUF972)
        1.1    8.9   5.3        2.9    7.6   3.7    1.7  1  PF09744.4  JNK_SAPK-associated protein-1
        1.7    9.0   5.2        1.2    9.4   1.3    2.0  2  PF14357.1  Domain of unknown function (DUF4404)
        1.7    8.4   7.2       0.84    9.3   1.1    2.6  3  PF07716.10 Basic region leucine zipper
          2    8.0   5.1          1    8.9   0.9    1.9  2  PF08286.6  Spc24 subunit of Ndc80
        3.5    7.7   5.8        9.5    6.3   1.7    2.1  2  PF05837.7  Centromere protein H (CENP-H)
        7.6    5.9   8.4         22    4.4   5.8    1.7  1  PF04156.9  IncA protein
        7.7    6.7  10.7         79    3.5   7.4    2.2  1  PF06005.7  Protein of unknown function (DUF904)


Domain annotation for each model (and alignments):
>> PF03920.10  Groucho/TLE N-terminal Q-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.1e-05    0.0065      14      84 ..      34     107 ..      15     110 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.1e-05
  PF03920.10  14 gqplkftvsesldrikeefqflqaqyhslkleceklasektelqrhYvmYYemsyGL...n.iemhkqaeiakrl 84 
                 +  ++  ++e  + +   f++ qa+++ l+  +  l +e + l+r+ v   e s G    n   m++q e+ kr+
  MMETSP1325-20131115|1977_1  34 AARIRGEFTELKEELDHKFNLQQAENKRLQSHISSLKTENQALERRTVALXEKSKGFgggNaRRMNRQGEV-KRI 107
                 445566677788888889************************************98744442469999986.555 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1       1.3   7.5e+02      30      43 ..       7      20 ..       2      34 .. 0.65
   2 ?   15.1   1.8   2.6e-05     0.015      17      60 ..      34      77 ..      31      81 .. 0.91

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 1.3
                HHHHHHHHHHHHH. CS
  PF00170.16 30 eLeekvkeLeaeNk 43
                +L e   eL++ Nk
  MMETSP1325-20131115|1977_1  7 RLSEQLYELQNSNK 20
                55555556666665 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 2.6e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHH CS
  PF00170.16 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                A r R  + +  eeL  k+   +aeNk+L++ +++lk e ++l+
  MMETSP1325-20131115|1977_1 34 AARIRGEFTELKEELDHKFNLQQAENKRLQSHISSLKTENQALE 77
                678888889999****************************9987 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.4      0.13        77      73     103 ..       3      33 ..       1      47 [. 0.62
   2 ?   14.4   4.1   4.2e-05     0.024      52      96 ..      43      87 ..      28      90 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.13
   PF11559.3  73 skierlktqleqlerelallqekerqlekkl 103
                  ++ rl++ql +l++ +++ +    q+ k+l
  MMETSP1325-20131115|1977_1   3 ATTTRLSEQLYELQNSNKATEDGAGQMVKDL 33 
                 4566777777777777766655555554444 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 4.2e-05
   PF11559.3 52 eqresleetlrkleaeierlqskierlktqleqlerelallqeke 96
                e +e+l  + +  +ae++rlqs+i+ lkt++++ler+  +l ek 
  MMETSP1325-20131115|1977_1 43 ELKEELDHKFNLQQAENKRLQSHISSLKTENQALERRTVALXEKS 87
                67899999999**************************99888876 PP

>> PF03980.9  Nnf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2      0.35     2e+02      82     103 ..       3      24 ..       1      28 [. 0.86
   2 ?   14.2   0.5   5.4e-05     0.031      70     111 .]      31      72 ..      26      72 .. 0.93

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.35
   PF03980.9  82 kqleeLnarlqklqaeNaelad 103
                 ++ ++L+++l +lq++N++ +d
  MMETSP1325-20131115|1977_1   3 ATTTRLSEQLYELQNSNKATED 24 
                 6778999**********99876 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 5.4e-05
   PF03980.9  70 ellaahLvpllekqleeLnarlqklqaeNaeladeiqelree 111
                 ++laa +    ++ +eeL+++ +  qaeN++l+ +i++l++e
  MMETSP1325-20131115|1977_1  31 KDLAARIRGEFTELKEELDHKFNLQQAENKRLQSHISSLKTE 72 
                 689999999****************************99875 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.6   0.00015     0.084      14      97 ..       3      88 ..       1      90 [. 0.85
   2 ?    5.8   0.8     0.024        13      21      61 ..      50      90 ..      45     107 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.00015
   PF10046.4 14 aeleisaedlklLeklNeataekykel.eqkakslekeleklkq.kyeelkpylqqideieeqvtkLeeavkeLDeyskeLEsKvk 97
                a+++  +e+l+ L++ N+at++   ++ ++ a+ ++ e+ +lk+ ++ +++ + ++ +++++++++L +  + L+  + +L +K k
  MMETSP1325-20131115|1977_1  3 ATTTRLSEQLYELQNSNKATEDGAGQMvKDLAARIRGEFTELKEeLDHKFNLQQAENKRLQSHISSLKTENQALERRTVALXEKSK 88
                66778899************998876537999*****9999986156778888888899****************99999999865 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.024
   PF10046.4 21 edlklLeklNeataekykeleqkakslekeleklkqkyeel 61
                 +++l +  N++  +++ +l+++ ++le+ + +l +k++ +
  MMETSP1325-20131115|1977_1 50 HKFNLQQAENKRLQSHISSLKTENQALERRTVALXEKSKGF 90
                56777778888888888888888888888888888887765 PP

>> PF08961.5  Domain of unknown function (DUF1875)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.1   7.6e-05     0.043      97     166 ..      11      80 ..       6      88 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 7.6e-05
   PF08961.5  97 llyllkqksevaepciGskapkddktiieeqatkia.dlkrlveflvaenerlrkenkqlkaekarllkgt 166
                  ly l++ ++++e  +G    kd  ++i  + t++  +l ++ +   aen+rl+     lk+e+  l + t
  MMETSP1325-20131115|1977_1  11 QLYELQNSNKATEDGAGQ-MVKDLAARIRGEFTELKeELDHKFNLQQAENKRLQSHISSLKTENQALERRT 80 
                 599*************96.579999999999999862799999999******************9986655 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.5    0.0001     0.059     186     262 ..       5      82 ..       1     105 [. 0.83

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.0001
   PF08317.6 186 kealkeelasLrqlkde....leecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiae 262
                  ++l e+l +L++ ++     + ++ ++  + +r+e ++l+e+++   +k +  ++e + l+ +i++lk++ + l+ ++ +
  MMETSP1325-20131115|1977_1   5 TTRLSEQLYELQNSNKAtedgAGQMVKDLAARIRGEFTELKEELD---HKFNLQQAENKRLQSHISSLKTENQALERRTVA 82 
                 5678888999998888767778899999999**************...888888888999999999999999988877655 PP

>> PF06102.7  Domain of unknown function (DUF947)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.2   0.00017     0.096      61     103 ..      37      80 ..      16      89 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00017
   PF06102.7  61 rekEikelkkklkkkk.adeeekeelkkklqslksrlktlkkke 103
                  + E+ elk++l++k  ++++e+++l+++++slk+++++l+++ 
  MMETSP1325-20131115|1977_1  37 IRGEFTELKEELDHKFnLQQAENKRLQSHISSLKTENQALERRT 80 
                 5689********998779*********************99986 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0       0.6   3.4e+02      48      66 ..       5      23 ..       2      27 .. 0.79
   2 ?   10.7   0.3   0.00081      0.46      10      90 ..      30     108 ..      25     110 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.6
   PF09177.6 48 lesiewdledLeeavsvve 66
                   ++++l +L+++ ++ e
  MMETSP1325-20131115|1977_1  5 TTRLSEQLYELQNSNKATE 23
                5678999999999988866 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00081
   PF09177.6  10 vqksidkleslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrRkqfvaeir 90 
                 v++ +++++  +++++e++  +   + ++  +k+L++ ++s++++ + Le+   +  ++++ fg +++   +R+  v++i 
  MMETSP1325-20131115|1977_1  30 VKDLAARIRGEFTELKEELDHKF--NLQQAENKRLQSHISSLKTENQALERRTVALXEKSKGFGGGNARRMNRQGEVKRIS 108
                 66777788888888888777765..67788899*****************999999999999*999999999999888876 PP

>> PF12072.3  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.2    0.0002      0.11      57     131 ..      29     106 ..       4     111 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.0002
   PF12072.3  57 eakeeihklreelE...kelkerrkelqrqEkRllqkeetLdrkeeslekkeekleekekelkqkeqsleekeeevee 131
                  +k+ + ++r e+    +el ++ +  q+ +kRl+   ++L+ ++++le++  +l ek k     +++  +++ ev++
  MMETSP1325-20131115|1977_1  29 MVKDLAARIRGEFTelkEELDHKFNLQQAENKRLQSHISSLKTENQALERRTVALXEKSKGFGGGNARRMNRQGEVKR 106
                 56777777776654121444444444445557999999*****************99999877777777777666666 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.1   0.00026      0.15     105     162 ..      22      88 ..       2      90 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00026
   PF03234.9 105 eqpkynemledLldqv.......kdevdekk..aaklieelkkhrkklkkeekelekkleelekeek 162
                       +m++dL  ++       k+e d+k   ++++ ++l++h + lk+e++ le++   l +++k
  MMETSP1325-20131115|1977_1  22 TEDGAGQMVKDLAARIrgeftelKEELDHKFnlQQAENKRLQSHISSLKTENQALERRTVALXEKSK 88 
                 334456899999999987777667777776589999999**************99999988887765 PP

>> PF09074.5  Mer2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.2    0.0013      0.73      64     120 ..       9      71 ..       2     115 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0013
   PF09074.5  64 veqlnekLesqeaskneeikklikklgaqlnnqlkevvkaleeklktink.nsalkq......v 120
                 +eql e L++ +++++++  +++k+l+a +  +  e ++ l  k +  +  n+ l+       +
  MMETSP1325-20131115|1977_1   9 SEQLYE-LQNSNKATEDGAGQMVKDLAARIRGEFTELKEELDHKFNLQQAeNKRLQShisslkT 71 
                 444443.346778888888888888888888888888888877777666644444433333331 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       1.3   7.2e+02      32      44 ..      38      50 ..      31      54 .. 0.71
   2 ?    7.9   1.8    0.0037       2.1      16      38 ..      61      83 ..      46      89 .. 0.60

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 1.3
  PF02183.13 32 raevlsLkeklqe 44
                r e ++Lke+l +
  MMETSP1325-20131115|1977_1 38 RGEFTELKEELDH 50
                6666777777665 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0037
  PF02183.13 16 aLkaendsLqkEkekLraevlsL 38
                +L++   sL+ E+++L    ++L
  MMETSP1325-20131115|1977_1 61 RLQSHISSLKTENQALERRTVAL 83
                34444555555555555555555 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.79   4.5e+02      28      43 ..       7      22 ..       2      38 .. 0.61
   2 ?   11.1   1.8   0.00033      0.19      20      48 ..      53      81 ..      36      88 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.79
  PF04977.10 28 alqaelaklkaeneeL 43
                +l ++l +l++ n++ 
  MMETSP1325-20131115|1977_1  7 RLSEQLYELQNSNKAT 22
                4444555555555544 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00033
  PF04977.10 20 yqlkqeiaalqaelaklkaeneeLeaevk 48
                + +++e ++lq ++ +lk en++Le++  
  MMETSP1325-20131115|1977_1 53 NLQQAENKRLQSHISSLKTENQALERRTV 81
                45677888888888888888888887755 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.3   0.00068      0.39       5      53 ..      29      78 ..      25      86 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00068
   PF13747.1  5 eleaalkrLeaaldsLesaverrleaerkr.deleaeiqaldadrsrLaq 53
                 +++ ++r++  +++L + ++++ + ++++ + l++ i++l+ + + L++
  MMETSP1325-20131115|1977_1 29 MVKDLAARIRGEFTELKEELDHKFNLQQAEnKRLQSHISSLKTENQALER 78
                5788999*****************99888758899999**9999988875 PP

>> PF02646.11  RmuC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1     0.055        31      32      73 ..       4      41 ..       1      44 [. 0.76
   2 ?    9.5   2.1   0.00062      0.35       5      61 ..      31      84 ..      27      89 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.055
  PF02646.11 32 elerLeeelkqlqelngeiqqlakevknLkkiLknkktrGnw 73
                ++ rL+e+l +lq+ n   ++++++++++ k L+    rG +
  MMETSP1325-20131115|1977_1  4 TTTRLSEQLYELQNSN---KATEDGAGQMVKDLAAR-IRGEF 41
                5789999**9999999...99999999998888643.35555 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00062
  PF02646.11  5 eellkpvdekletlekrveesfekeaeelerLeeelkqlqelngeiqqlakevknLk 61
                + l ++++ + ++l+++++  f+ ++ e++rL+ +++ l++ n   q+l++ + +L 
  MMETSP1325-20131115|1977_1 31 KDLAARIRGEFTELKEELDHKFNLQQAENKRLQSHISSLKTEN---QALERRTVALX 84
                5677889999999******************************...99999988875 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.2    0.0046       2.6       7      57 ..      42      92 ..       2     112 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0046
   PF06156.8  7 fdklseleeqleelleeleelkkelkelleenaelkleneklrerleelee 57
                ++  +el+++ +  ++e ++l++++++l  en++l+    +l e+ +    
  MMETSP1325-20131115|1977_1 42 TELKEELDHKFNLQQAENKRLQSHISSLKTENQALERRTVALXEKSKGFGG 92
                444467788888888888999999999999999999888888887665544 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.7    0.0051       2.9      83     143 ..      22      83 ..       3      91 .. 0.47

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0051
   PF09744.4  83 lEdeleqekkelekkie.eleeevrqlelkaknlsdkvsrLeeretelkkeyeslheretkl 143
                  Ed + q+ k+l+ +i  e+ e   +l+ k    + +  rL+ + ++lk e ++l+ r   l
  MMETSP1325-20131115|1977_1  22 TEDGAGQMVKDLAARIRgEFTELKEELDHKFNLQQAENKRLQSHISSLKTENQALERRTVAL 83 
                 46666666666666664122222333333333333344455555555555555555444433 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.61   3.5e+02       8      36 ..       7      35 ..       2      40 .. 0.52
   2 ?    9.4   1.3    0.0022       1.2       2      37 ..      37      72 ..      36      88 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.61
   PF14357.1  8 kLheeLeqtdsldeetraeLkelrddiee 36
                +L+e+L + ++ +++t++   ++ +d+ +
  MMETSP1325-20131115|1977_1  7 RLSEQLYELQNSNKATEDGAGQMVKDLAA 35
                55566665555555555544444444444 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.0022
   PF14357.1  2 lrelLekLheeLeqtdsldeetraeLkelrddieea 37
                +r ++++L+eeL+++ +l +++ ++L++ +  ++  
  MMETSP1325-20131115|1977_1 37 IRGEFTELKEELDHKFNLQQAENKRLQSHISSLKTE 72
                78899**********************999888764 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       3.5     2e+03      37      50 ..       8      21 ..       4      24 .. 0.60
   2 ?    9.2   1.9    0.0016      0.92      28      54 .]      46      72 ..      42      79 .. 0.82
   3 ?    9.3   1.1    0.0015      0.84      24      51 ..      56      83 ..      55      86 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 3.5
  PF07716.10 37 LeeeNaqLrqkveq 50
                L+e+  +L++ +++
  MMETSP1325-20131115|1977_1  8 LSEQLYELQNSNKA 21
                55566666666655 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0016
  PF07716.10 28 eeleervkeLeeeNaqLrqkveqLeke 54
                eel ++ +  ++eN +L+  +++L++e
  MMETSP1325-20131115|1977_1 46 EELDHKFNLQQAENKRLQSHISSLKTE 72
                788888888888888888888888876 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.0015
  PF07716.10 24 kakeeeleervkeLeeeNaqLrqkveqL 51
                +a+++ l++ + +L++eN++L+++  +L
  MMETSP1325-20131115|1977_1 56 QAENKRLQSHISSLKTENQALERRTVAL 83
                5788889999999999999997775555 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.2      0.58   3.3e+02      30      49 ..       6      23 ..       1      49 [. 0.56
   2 ?    8.9   0.9    0.0018         1       7      46 ..      50      92 ..      43     110 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.58
   PF08286.6 30 eelkeeleeleeqenegkee 49
                ++l e+l el+++++    e
  MMETSP1325-20131115|1977_1  6 TRLSEQLYELQNSNKA--TE 23
                3444444444444444..22 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0018
   PF08286.6  7 ekvrlak.elndleselenlqseleelkeeleeleeqene..g 46
                 k++l++ e + l+s +++l++e + l++++  l e+++   g
  MMETSP1325-20131115|1977_1 50 HKFNLQQaENKRLQSHISSLKTENQALERRTVALXEKSKGfgG 92
                3455544156679999999999999999999999888876541 PP

>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1      0.15        84      11      41 ..       4      34 ..       1      53 [. 0.78
   2 ?    6.3   1.7     0.017       9.5       8      39 ..      55      86 ..      42     109 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.15
   PF05837.7 11 asretreeLsdvekerlqlkqknrelvrell 41
                 ++ ++e+L+++++ ++++++   ++v+ l 
  MMETSP1325-20131115|1977_1  4 TTTRLSEQLYELQNSNKATEDGAGQMVKDLA 34
                5678899999999999999888888777665 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.017
   PF05837.7  8 lqqasretreeLsdvekerlqlkqknrelvre 39
                +q + + ++ ++s+++ e+ +l++++++l ++
  MMETSP1325-20131115|1977_1 55 QQAENKRLQSHISSLKTENQALERRTVALXEK 86
                556677899****************9998776 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   5.8     0.038        22      88     122 ..      43      77 ..       1      89 [. 0.55

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.038
   PF04156.9  88 sqlseleeeleqleerlaeleseledleedlellq 122
                 +   el++++   + +++ l+s++++l+ +++ l+
  MMETSP1325-20131115|1977_1  43 ELKEELDHKFNLQQAENKRLQSHISSLKTENQALE 77 
                 22334555555566666666666666666666555 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   7.4      0.14        79      29      68 ..      43      86 ..       2      90 .. 0.69

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.14
                HHHHHHHHHH.......HHHHHHHHHHHHHHHHH---TTHHHHH--- CS
   PF06005.7 29 eLkeeneqlk.......eeneeLeeenkklkeereawqerlralLgk 68
                eLkee             en+ L++ +  lk e +a ++r  al +k
  MMETSP1325-20131115|1977_1 43 ELKEEL---DhkfnlqqAENKRLQSHISSLKTENQALERRTVALXEK 86
                444432...11123334566666666666666666666665555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1038  (0.0759216); expected 273.4 (0.02)
Passed bias filter:                      768  (0.0561732); expected 273.4 (0.02)
Passed Vit filter:                       121  (0.0088502); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.69
# Mc/sec: 427.18
//
Query:       MMETSP1325-20131115|1974_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.2   0.9      0.022   14.1   0.6    1.1  1  PF11361.3 Protein of unknown function (DUF3159)
      0.026   14.2   0.1      0.033   13.9   0.1    1.2  1  PF03695.8 Uncharacterised protein family (UPF0149)


Domain annotation for each model (and alignments):
>> PF11361.3  Protein of unknown function (DUF3159)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.6   3.2e-06     0.022       7      58 ..      18      70 ..      15      84 .] 0.77

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.2e-06
   PF11361.3  7 lvesalPvvvFvvlflitkeLrlaiiaavavavvllvvrlvqresv.qsalsg 58
                l++++lPv++F ++ l++   +l+++ a+ +a+v++ v+l  r  + ++a+++
  MMETSP1325-20131115|1974_1 18 LLNTTLPVMIFHPVLLAQLMNMLSLVHAILTALVVAGVKLDPRAWLlRYAVAA 70
                789************976667899999********999998776431445444 PP

>> PF03695.8  Uncharacterised protein family (UPF0149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   4.8e-06     0.033      19      43 ..      39      63 ..      30      75 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 4.8e-06
   PF03695.8 19 slselhGfLtallagpepidpeeWl 43
                 ls +h  Ltal+++++ +dp +Wl
  MMETSP1325-20131115|1974_1 39 MLSLVHAILTALVVAGVKLDPRAWL 63
                567789******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 428.29
//
Query:       MMETSP1325-20131115|1975_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.017   13.9   0.0       0.15   10.8   0.1    1.9  2  PF00180.15 Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> PF00180.15  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0    0.0049        67     267     306 ..      27      73 ..      16      85 .. 0.73
   2 ?   10.8   0.1   1.1e-05      0.15      16      86 ..      77     146 ..      73     158 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.0049
                 S----EEE-----GGG-----.......------HHHHHHHHHHH-- CS
  PF00180.15 267 kkvalfEpvHGsapdiagkdk.......aNpiavilSaammLrhslg 306
                 k ++ + +  G  pd ag ++        N  a++ ++ m+L+ + g
  MMETSP1325-20131115|1975_1  27 KDTCYYDADGGQRPDAAGGSVrgggsdaDNGRASVDAWQMVLERRNG 73 
                 67888888888899998877777777779*************98544 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHHHHTT---EEEEEE------HHHH----S-HHHHHHHHTSSEEE-------T-GGGSTT---- CS
  PF00180.15  16 eaalkvlkavkekaglelefeevdvGgaaidetgeplpeetleaikeadavllgavgtpkgkevrpeegLl 86 
                 e+a++ l+++  +a  e+e+ e      ++de + ++ +e++ea+ ++   +lg ++ p+++e +  +gL+
  MMETSP1325-20131115|1975_1  77 EEAVDALNDLFVEAREEIEMAEESKETTYYDE-EAQIAQEAVEAALAEYEDILGGLEEPEKGEFQRSNGLK 146
                 57788888888888999***999999999999.899************************99999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       702  (0.0513458); expected 273.4 (0.02)
Passed bias filter:                      507  (0.0370831); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.55
# Mc/sec: 710.19
//
Query:       MMETSP1325-20131115|1973_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.022   14.5   0.0    1.5  1  PF13424.1 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.6e-06     0.022       7      60 ..      75     130 ..      69     133 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.6e-06
   PF13424.1   7 ilnnlalvlr.rlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalg 60 
                 ++ nla++++ rl+d+ + +  + ++  + + +lg++hp++a+ l + + ++ +lg
  MMETSP1325-20131115|1973_1  75 THGNLAEFYLyRLRDLRKGIVAFYESCYVgIHLLGPTHPNVASKLQEFSSILSQLG 130
                 688***************************************99999888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.72
# Mc/sec: 615.73
//
Query:       MMETSP1325-20131115|1978_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 391.71
//
Query:       MMETSP1325-20131115|1981_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-10   38.8  19.0    3.6e-10   38.4  13.1    1.1  1  PF02460.13 Patched family
     0.0052   16.1  10.7     0.0052   16.1   7.4    2.0  2  PF12349.3  Sterol-sensing domain of SREBP cleavage-activation
  ------ inclusion threshold ------
      0.017   13.7  10.4      0.025   13.1   7.2    1.3  1  PF03176.10 MMPL family
      0.066   10.5  10.2       0.09   10.0   7.1    1.1  1  PF00873.14 AcrB/AcrD/AcrF family
       0.21   11.2   9.0      0.043   13.4   0.8    2.1  2  PF04932.10 O-Antigen ligase
        6.1    6.0   8.3         11    5.2   0.4    2.2  2  PF00487.19 Fatty acid desaturase


Domain annotation for each model (and alignments):
>> PF02460.13  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4  13.1   1.6e-13   3.6e-10     644     790 ..      76     220 ..      62     231 .. 0.91

  Alignments for each domain:
  == domain 1    score: 38.4 bits;  conditional E-value: 1.6e-13
  PF02460.13 644 ltilpstiqsiilalvcmavvcllfipnlitvlvitlsivSidiGvlGflslWgvdLDpismitiimsiGFsvDlsaHiayhfvrsegdetakeRvadalealgwPvvqaalSTilcvlvLlfvdsymvevFvKtvvLvvvlgllHG 790
                   + +s+ q++i  l++ +vv l+f +n+   ++ +l++ Si   v+  + + g + D ++ i+i ++ G svD+  H a+++  + g  + +++v++al+ +g  v  + l T+ + + L++ d    + F   + +v+++++   
  MMETSP1325-20131115|1981_1  76 AYLESSAYQNMIAGLCLAVVVILIFTNNWWLTALCALALYSIISLVFCEMVFFGWEVDILVAIDISIASGMSVDYVLHLAHAYNGETG--DHADKVRKALKDMGVSVASGMLTTFFACIALFLCDMLWFRLFGCFIAMVIITAFAVS 220
                 567899********************************************************************************99..89***********************************99999988888888776544 PP

>> PF12349.3  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.2     0.075   1.7e+02      81     131 ..      57     107 ..      41     114 .. 0.78
   2 !   16.1   7.4   2.3e-06    0.0052      19     136 ..     117     231 ..      99     244 .. 0.79

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.075
   PF12349.3  81 vgpsilltsltellafligaltdvpavqeFclfaavavlfdFllqitfFva 131
                  g+   + ++++  ++++ga+ +  a q+  +  ++av++  ++   ++++
  MMETSP1325-20131115|1981_1  57 SGMNNGIQTMSQYNIMALGAYLESSAYQNMIAGLCLAVVVILIFTNNWWLT 107
                 56666788899999999**********999999999999877766655555 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 2.3e-06
   PF12349.3  19 svasslgllallglkltliileviPflvlavGvdnmfllvkavqrtskslsveeriaealgevgpsilltsltellafligaltdvpavqeFclfaavavlfdFllqitfFvavLsld 136
                  +   +  + ++g ++  +++ +   ++ +++vd ++ l +a++  + ++   +++ +al+++g+s++  +lt ++a +  +l d+   + F  f a+ +++ F+  ++  +++L+l 
  MMETSP1325-20131115|1981_1 117 IISLVFCEMVFFGWEVDILVA-IDISIASGMSVDYVLHLAHAYNGETGDHA--DKVRKALKDMGVSVASGMLTTFFACIALFLCDMLWFRLFGCFIAMVIITAFAVSMFGMMSLLALA 231
                 333334445667777777766.555588899************99888877..8899****************99988866799******************************9986 PP

>> PF03176.10  MMPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   7.2   1.1e-05     0.025     149     304 ..      86     233 ..      48     238 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.1e-05
  PF03176.10 149 evvtlvvilviLlivyrSlvaallplltvvvsllaalglvlilalllglelstfvlgllvvlliavGtDYallLvsRyreelaagedreeaviravastgkvvtaaGltvaiamlgLvvarlpvlaqvGvaialGvlvdvlivlTllPAllvllGr 304
                  +++l++++v+ li + +    +l     ++ l   ++lv     + g e+    +++ + ++ + ++DY l L   y  e +++ d+   v +a++++g  v+   lt  +a ++L + ++  ++ +G  ia+ ++ ++++++  + +ll+l+G 
  MMETSP1325-20131115|1981_1  86 MIAGLCLAVVVILIFTNNWWLTALC----ALALYSIISLVFCEMVFFGWEVD-ILVAIDISIASGMSVDYVLHLAHAYNGETGDHADK---VRKALKDMGVSVASGMLTTFFACIALFLCDMLWFRLFGCFIAMVIITAFAVSMFGMMSLLALAGP 233
                 5788899888888888887655543....33444445553333344444443.556788999999***********************...************9999**************************99999988888777999999985 PP

>> PF00873.14  AcrB/AcrD/AcrF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   7.1   3.9e-05      0.09     335     481 ..      84     227 ..      77     231 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 3.9e-05
                 HHHHHHHHHHHHHHHHHH-SCCCCCHHHHHHHHHH---HHHCCC----CEHHHH---TTT---HHHHHHHHHHHHHHHHHH----HHHHHHHH-----------HHHHHHHCCCCCG-------HHHHH.HHHHHHHHHHHHHHHHCT CS
  PF00873.14 335 ktlleaivLvvlvlflFLqnlratlipaiavPlsllgtfavlkalglsiNlltlfgLvlAiGlvvDdAiVvvEnverkleeegekpleaalksmkeiegalvaialvllavfvPilflgGveGklfrqf.altivlaillsvlvaltl 481
                 ++++ ++ L+v+v+++F +n+  t   a+a+   + + f  ++++g  +  l  + + +A G+ vD    v+   +   + e  ++  +++k+ k++++++ ++ l+   + + +++   +  +lf  f a+ i+ a ++s++  + l
  MMETSP1325-20131115|1981_1  84 QNMIAGLCLAVVVILIFTNNWWLTALCALALYSIISLVFCEMVFFGWEVDILVAIDISIASGMSVDY---VL-HLAHAYNGETGDHADKVRKALKDMGVSVASGMLTTFFACIALFLCDMLWFRLFGCFiAMVIITAFAVSMFGMMSL 227
                 78999************************************************************95...33.334444444677889999999999999999988888888888888888899998874677888999999877665 PP

>> PF04932.10  O-Antigen ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.8   1.9e-05     0.043      19      67 ..      86     134 ..      69     165 .. 0.81
   2 ?    2.2   1.0     0.054   1.2e+02      17      57 ..     182     222 ..     176     243 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.9e-05
  PF04932.10  19 iigvlvalivlillfyknlikrwllkliiviiliilfviitfaflkldk 67 
                 +i+ l + +v+il+f  n++ + l +l++ +i++++f  ++f ++  d 
  MMETSP1325-20131115|1981_1  86 MIAGLCLAVVVILIFTNNWWLTALCALALYSIISLVFCEMVFFGWEVDI 134
                 48999999*****************************998888887765 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.054
  PF04932.10  17 saiigvlvalivlillfyknlikrwllkliiviiliilfvi 57 
                 s++++ ++a i l+l  + +++    ++++++i++  + ++
  MMETSP1325-20131115|1981_1 182 SGMLTTFFACIALFLCDMLWFRLFGCFIAMVIITAFAVSMF 222
                 66777777777777777666665555555555555544444 PP

>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   1.3    0.0063        14     134     172 ..      84     122 ..      36     130 .. 0.67
   2 ?    5.2   0.4    0.0047        11     133     176 ..     180     223 ..     147     237 .. 0.65

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0063
  PF00487.19 134 lallilalllalaglllllsglgalllyvvplalaltvl 172
                 ++++  + l+++++l++  +++   l+++++++++++v+
  MMETSP1325-20131115|1981_1  84 QNMIAGLCLAVVVILIFTNNWWLTALCALALYSIISLVF 122
                 455555556666666555555555555555555544443 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0047
  PF00487.19 133 llallilalllalaglllllsglgalllyvvplalaltvlllvn 176
                 + + ++  +++ +a++l+   ++  + +++++ +++++ +  ++
  MMETSP1325-20131115|1981_1 180 VASGMLTTFFACIALFLCDMLWFRLFGCFIAMVIITAFAVSMFG 223
                 44445555556666666666666666666666666666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1033  (0.0755559); expected 273.4 (0.02)
Passed bias filter:                      478  (0.034962); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.41s 00:00:01.09 Elapsed: 00:00:00.65
# Mc/sec: 951.17
//
Query:       MMETSP1325-20131115|1979_1  [L=538]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.86u 0.39s 00:00:01.25 Elapsed: 00:00:01.07
# Mc/sec: 1204.90
//
Query:       MMETSP1325-20131115|1983_1  [L=467]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0091   15.9   0.1      0.016   15.1   0.0    1.3  1  PF05188.12 MutS domain II
  ------ inclusion threshold ------
      0.026   13.6   0.0      0.029   13.4   0.0    1.1  1  PF04998.12 RNA polymerase Rpb1, domain 5
      0.036   13.5   1.9      0.047   13.2   0.0    2.1  2  PF06687.7  SUR7/PalI family
      0.054   13.3   1.4       0.43   10.3   0.1    2.5  2  PF13858.1  Protein of unknown function (DUF4199)
      0.065   12.5   0.3        1.5    8.0   0.2    2.7  3  PF13567.1  Domain of unknown function (DUF4131)


Domain annotation for each model (and alignments):
>> PF05188.12  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.9e-06     0.016      11     111 ..     315     412 ..     307     423 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 5.9e-06
                 ----.E-----BTTTTB-----EE--HHHHHHHHH----EEEE-----------HHHHHH----EEEE-SSTT-S--STTTTT----------TTTTTTC-H CS
  PF05188.12  11 egrr.vGlafiDlstgefvvsefedfeeleaeLsrlsPkElllpedlsestaeeessklrelrsrvgvretvefesekaserleedfsvedldgfglekekk 111
                  g++ ++l+++++ t  +++++   f++ e+ L+ +++ E+  ++   +   e e+    +  s+v+  +++e++++++ +++ ++ +v+ l+++g  ++ k
  MMETSP1325-20131115|1983_1 315 YGPAwYALVVASIFTLLLSLDSMLSFTKYEDNLTVVEAMEIAKKKQKQK---EREMKFKNTALSNVNLDKDMEQKVAESFRNVMQHANVQGLESMGE-ELTK 412
                 56666***********************************866665544...468*****************************************8.3333 PP

>> PF04998.12  RNA polymerase Rpb1, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.1e-05     0.029     150     247 ..     180     431 ..      44     436 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.1e-05
                 -..........................................................................................................................................................E--TT--EEEEEEEEEEEE-----EEEEEEEEEEEE---HHHHTT---.-ETTTEEES-HHHHHHH-------HHHHHHHHHHHHH------HHHHH CS
                 x..........................................................................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF04998.12 150 l..........................................................................................................................................................vkegekvkagekltdgrvdpeeklekkekelllktegtelqevyklqgvidndktvsndikeilkvlgIeaaresilkeieevfkeegievnrrhla 247
                 +                                                                                                                                                           +  + +k++++lt  + ++  k+++k+ke+++k++ t+l++v   +++ +    +  ++++ ++v g+e+ +e ++k+  e++k+ g e  +r+ +
  MMETSP1325-20131115|1983_1 180 CytgrqypgadaqeqrtvfdmkimtrvttmmavifglvgvflitllllvgvdavstkirkryvfwasfssllqaicsligaacwttvhqallekkdnclveradgtvswlprkdgqadeslydgtdmgmcladfrygpawyalvvasiftlllslDSMLSFTKYEDNLTVVEAMEIAKKKQKQKEREMKFKNTALSNVNLDKDMEQKVAESFRNVMQHANVQGLESMGEELTKQTGEAMKNIGKESLKRMES 431
                 05555555555555555555555555555555555555555555555555555555555566666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666778899999999999999999************************99999999999***************************99988888765 PP

>> PF06687.7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.7e-05     0.047     111     176 ..     200     266 ..     157     277 .. 0.83
   2 ?   -2.2   0.4      0.83   2.3e+03     124     140 ..     321     337 ..     316     380 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.7e-05
   PF06687.7 111 lktlnnliskllivh.iialvlsvlllllslllavcsspe.plsflnlllsllsflstllaalldtll 176
                 +k++ ++++ + +++ +++++l +llll+ ++ av  + +  + f + + sll  +++l++a+++t +
  MMETSP1325-20131115|1983_1 200 MKIMTRVTTMMAVIFgLVGVFLITLLLLV-GVDAVSTKIRkRYVFWASFSSLLQAICSLIGAACWTTV 266
                 55566666666555438888899999999.88788888778***********************9976 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.83
   PF06687.7 124 vhiialvlsvlllllsl 140
                  +++a ++++ll l s+
  MMETSP1325-20131115|1983_1 321 ALVVASIFTLLLSLDSM 337
                 45666666666655433 PP

>> PF13858.1  Protein of unknown function (DUF4199)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1     0.098   2.7e+02       3      21 ..     211     229 ..     183     265 .. 0.68
   2 ?   10.3   0.1   0.00016      0.43      61     139 ..     313     395 ..     309     403 .. 0.68

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.098
   PF13858.1   3 Glilglilillflllyllg 21 
                 ++i+gl+ + l++ll l+g
  MMETSP1325-20131115|1983_1 211 AVIFGLVGVFLITLLLLVG 229
                 4555555555555555554 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00016
   PF13858.1  61 isfkqafkfgllisliaallstlfqyiylnfidpdffenlieqaee.em.eeagageaeie.ekieqelemkeklsp.isllf 139
                 + ++ a+ + ++ s++  lls  +++ ++++ d+  + +++e a++ ++ +e +++ + ++  +   ++ m++k++  ++ ++
  MMETSP1325-20131115|1983_1 313 FRYGPAWYALVVASIFTLLLSLDSMLSFTKYEDNLTVVEAMEIAKKkQKqKEREMKFKNTAlSNVNLDKDMEQKVAEsFRNVM 395
                 78********************************9999999999553333444443333332222222233333222355554 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.19   5.3e+02      44      57 ..      82      95 ..      67     132 .. 0.67
   2 ?    8.0   0.2   0.00056       1.5      17      93 ..     213     295 ..     206     301 .. 0.61
   3 ?   -0.1   0.0      0.17   4.6e+02       3      29 ..     307     333 ..     306     387 .. 0.74

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.19
   PF13567.1 44 llglllllaglyll 57
                ll+l lllag+ l 
  MMETSP1325-20131115|1983_1 82 LLLLGLLLAGFALS 95
                33333333333322 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.00056
   PF13567.1  17 lllalllalllllllflkr......rkrrrlllllglllllaglylllrapqpssndlsrllesgkevt.veGvvestprvtgs 93 
                 ++ +++++l++llll+         rkr+ +++ ++ ll +++++++++ +++ ++ l +  + +  v+   G+v+ +pr++g+
  MMETSP1325-20131115|1983_1 213 IFGLVGVFLITLLLLVGVDavstkiRKRYVFWASFSSLLQAICSLIGAACWTTVHQALLEKKD-NCLVErADGTVSWLPRKDGQ 295
                 344444444444444444477886677777766666666666666666555555555555555.55555688999999988876 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.17
   PF13567.1   3 Gillaalaslplgllllalllalllll 29 
                 G  la +  +p ++ l+++ ++ lll 
  MMETSP1325-20131115|1983_1 307 GMCLADFRYGPAWYALVVASIFTLLLS 333
                 555665666666666666666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1304  (0.0953774); expected 273.4 (0.02)
Passed bias filter:                      549  (0.0401551); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.90u 0.40s 00:00:01.30 Elapsed: 00:00:00.61
# Mc/sec: 1834.59
//
Query:       MMETSP1325-20131115|1984_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.57
# Mc/sec: 1127.94
//
Query:       MMETSP1325-20131115|1982_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-05   23.1   0.1    0.00024   21.2   0.1    1.8  2  PF12796.2  Ankyrin repeats (3 copies)
    0.00013   21.1   0.1    0.00019   20.6   0.1    1.2  1  PF09851.4  Short C-terminal domain
  ------ inclusion threshold ------
      0.018   14.6   1.6        1.4    8.7   0.0    3.2  3  PF00023.25 Ankyrin repeat
      0.043   13.9   1.9        2.5    8.3   0.1    3.2  3  PF13857.1  Ankyrin repeats (many copies)
      0.043   14.2   0.1       0.19   12.1   0.0    2.1  2  PF13637.1  Ankyrin repeats (many copies)
       0.14   12.3   0.2        1.7    9.0   0.0    2.6  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.47   1.1e+03      29      43 ..     150     164 ..     113     192 .. 0.73
   2 !   21.2   0.1   1.1e-07   0.00024      29      78 ..     193     242 ..     151     248 .. 0.76

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.47
   PF12796.2  29 pLhlAaeagnleivk 43 
                 pLh+ a  g+ + v+
  MMETSP1325-20131115|1982_1 150 PLHALATCGCADLVD 164
                 666666666666665 PP

  == domain 2    score: 21.2 bits;  conditional E-value: 1.1e-07
   PF12796.2  29 pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklL 78 
                 +  +Aa++g+l +v +L ++gad++  +  g ++   A+r gh+ +v++ 
  MMETSP1325-20131115|1982_1 193 AHGWAASHGQLHTVMVLAKNGADIEKVNGAGFNARSDAAREGHQHVVRWV 242
                 44499********************999*******************986 PP

>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.1   8.2e-08   0.00019       3      30 ..      44      71 ..      42      72 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 8.2e-08
   PF09851.4  3 daLekLkeLyarGeIteEEFeakKkkLL 30
                ++L++L+e +++G+ teEE+ +++  + 
  MMETSP1325-20131115|1982_1 44 ERLQELQEAKDAGLVTEEEYVEARNVII 71
                89******************99998875 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.068   1.5e+02       5      19 ..     150     164 ..     149     165 .. 0.91
   2 ?    8.7   0.0   0.00061       1.4       8      32 ..     196     220 ..     196     221 .. 0.92
   3 ?    0.4   0.0      0.25   5.8e+02       3      19 ..     224     240 ..     222     242 .. 0.79

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.068
                 HHHHHHHTTHHHHHH CS
  PF00023.25   5 PLHlAalrgnlevvk 19 
                 PLH  a +g+++ v 
  MMETSP1325-20131115|1982_1 150 PLHALATCGCADLVD 164
                 9**********9985 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00061
                 HHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   8 lAalrgnlevvklLlsqGAdlnaqd 32 
                 +Aa++g+l  v  L ++GAd+  ++
  MMETSP1325-20131115|1982_1 196 WAASHGQLHTVMVLAKNGADIEKVN 220
                 7*******************98765 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.25
                 CBHHHHHHHTTHHHHHH CS
  PF00023.25   3 fTPLHlAalrgnlevvk 19 
                 f +   Aa+ g+  vv+
  MMETSP1325-20131115|1982_1 224 FNARSDAAREGHQHVVR 240
                 5555669********98 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1      0.06   1.4e+02      18      32 ..     149     163 ..     142     164 .. 0.89
   2 ?    6.0   0.0    0.0056        13      22      52 ..     196     226 ..     195     228 .. 0.94
   3 ?    8.3   0.1    0.0011       2.5       1      34 [.     209     241 ..     209     242 .. 0.95

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.06
   PF13857.1  18 tpLhlAakggalevv 32 
                 +pLh  a +g++++v
  MMETSP1325-20131115|1982_1 149 CPLHALATCGCADLV 163
                 79***********98 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0056
   PF13857.1  22 lAakggalevvrlLlapgadlnlrdsdglta 52 
                 +Aa++g+l+ v  L ++gad+   +  g +a
  MMETSP1325-20131115|1982_1 196 WAASHGQLHTVMVLAKNGADIEKVNGAGFNA 226
                 8*************************99887 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0011
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrl 34 
                 L+++g ad+   +++g+++   Aa+ g+++vvr+
  MMETSP1325-20131115|1982_1 209 LAKNG-ADIEKVNGAGFNARSDAAREGHQHVVRW 241
                 77899.***************************9 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   8.5e-05      0.19       7      37 ..     196     226 ..     195     241 .. 0.93
   2 ?   -2.0   0.0       2.3   5.2e+03      26      37 ..     321     333 ..     310     336 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 8.5e-05
   PF13637.1   7 yaaisgrlelvklLlekgidinrtdesGnta 37 
                 +aa++g l +v+ L ++g+di ++++ G++a
  MMETSP1325-20131115|1982_1 196 WAASHGQLHTVMVLAKNGADIEKVNGAGFNA 226
                 8**************************9987 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 2.3
   PF13637.1  26 dinrt.desGnta 37 
                  +n t  ++Gnt 
  MMETSP1325-20131115|1982_1 321 PVNETwTRNGNTS 333
                 4899999999996 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.98   2.2e+03       5      19 ..     150     164 ..     146     172 .. 0.86
   2 ?    9.0   0.0   0.00074       1.7       8      29 ..     196     217 ..     194     218 .. 0.93
   3 ?   -2.2   0.0       3.1   7.1e+03       9      20 ..     230     241 ..     229     242 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.98
   PF13606.1   5 pLhlAasngrielve 19 
                 pLh  a +g+ +lv+
  MMETSP1325-20131115|1982_1 150 PLHALATCGCADLVD 164
                 799999999999987 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00074
   PF13606.1   8 lAasngrielveaLlengadin 29 
                 +Aas+g++  v  L +ngadi 
  MMETSP1325-20131115|1982_1 196 WAASHGQLHTVMVLAKNGADIE 217
                 8*******************96 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 3.1
   PF13606.1   9 Aasngrielvea 20 
                 Aa+ g+  +v++
  MMETSP1325-20131115|1982_1 230 AAREGHQHVVRW 241
                 8999**999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.60
# Mc/sec: 1429.83
//
Query:       MMETSP1325-20131115|1980_1  [L=798]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.1e-198  659.9  36.9   2.9e-198  659.4  25.6    1.1  1  PF00183.13 Hsp90 protein
    2.2e-11   43.4   0.4    8.3e-11   41.5   0.3    2.0  1  PF13589.1  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
    1.8e-09   37.1   0.1    3.5e-09   36.2   0.1    1.5  1  PF02518.21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
  ------ inclusion threshold ------
       0.47   10.3   3.7       0.27   11.1   0.1    2.5  3  PF10366.4  Vacuolar sorting protein 39 domain 1
        2.3    6.7  53.7        1.6    7.2   3.7    3.3  3  PF10446.4  Protein of unknown function (DUF2457)


Domain annotation for each model (and alignments):
>> PF00183.13  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  659.4  25.6  1.1e-201  2.9e-198       1     528 [.     246     791 ..     246     796 .. 0.93

  Alignments for each domain:
  == domain 1    score: 659.4 bits;  conditional E-value: 1.1e-201
                 GGGSHHHHHHHHHHHHTT-SS-EEEEEEE---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXEXXXXXXXEEEEEEESXXSXGGGSXGGGSXHHHHHHHHHCCCTTTSXXSEEEEEEEXXXXXEEEEEEEXSSXXSTTTXXX.XXXXXSXEEETTEEEESSXTTSSXGGGTTXEXEEEESSSXSSSXCCCCCTXHHHHHHHHHHHHHHHHHHHCCH....................TCHHHHHCHHHHHHHCCCXXXXSXCCCHHHHHTTXEEEETTEEEEEEEHHHHHHCSXTTXXEEEEEXXXXHHHHCCSCCHHHHHHTTXXEEEXXSCCHHHHHHCHSBXXXXEEEETTBX.XXXXXXHHH..HHHHHHHHHHHHHHHHHHHHTTTTTESEEEEXSSXSSXSEEEEBXXXXXXXXHHHHHHHHHHHXXTSXSSSSXXEEEEEXTTSHHHHHHHHHHHHTTTXHHHHHHHHHHHHHHHHHXXXXXSXTTTXXXHHHHHHTTTTHXXSTTTTTTGGGXGGGXXXXXXXXXXXXXXXX CS
  PF00183.13   1 eyleekklkelvkkhsefisypiklvvekevekevpdeeeeeekeekeeeeekeeeekkeeeeeeeeeeeekkkktkkvkettteeellnktkpiWtrnpkdvteeeyaafyksltndwedplavkhfsveGqlefkallfvPkraPfdlfesk.kkknniklyvrrvfitddaedliPeylsfvkGvvdsedlPlnvsretlqqnkilkvirkklvkkalelikeia....................edkedykkfyeefskniklGihedaanrkklakllrfestksedelvslkdyvtrmkeeqkkiyyitGeskkqvekspflerlkkknyevlyltdpvdeyaiqqlkefegkklvnvtkeGleleeseee..kkkreelkeefeeltkllkeiledkvekvvvsnrlvdsPcvlvtskyGWsanmerimkaqalrdssksaymsskktleinPkhpiikelrkrveedkedksvkdlvvllyetallesGfsledpkefasrierliklglsidedeeveeeeeeeeaeekesaeeeaeeseme 528
                 e+l++++l elv ++sefi++pi+l+ +k++++ev de+e+e +e+ e ++e e+   ++ ee+e ++ee+ ++ t+++  tt+e+e +n + +iW r++k+++++ey++fyks+++d++dp ++ hf +eG++efk++l+vP++aP+dl++++ +k+ +++lyvr+v+itd++edl+P yl+f++Gvvds+dlPlnvsretlqq+k+lkv+ kklv+kale+++++a                    ++++ y kf+e+f+kniklGi+ed+anr+kl kllrf+s ks++  +sl++yv+ m+e qk+iyyi+Ges ++ve+spflerlkkk++evlyl+dp+deyaiq+++e++gkkl++v+keGl +++s+e+  kk+ e  ke+f +lt+ lke+ ++kv kv+vs r+ ++Pc+lvts+yG sanmerim++qa++d sk++y +s+kt+einP+hp+i el ++ve++++++ +kd+++ll++tall+sGf+ +d ++++sr++r + ++l+++   e eee e +e++e+e+++e++e+++++
  MMETSP1325-20131115|1980_1 246   791
                 79*********************************9999776.4444444433332..333333333344456889988..69**********************************************************************988999**************************************************************************************99777778***********************************************************************************************************************99986336777889*************************************************************************************************************************************99999888777766666666666666655544 PP

>> PF13589.1  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.3     3e-14   8.3e-11       2     100 ..      86     210 ..      85     235 .. 0.74

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 3e-14
   PF13589.1   2 sl.edAiaelvdNsldAdatn..................vkisidedkkekseisieDnGkGmskeelvnal.klgrsskdeekeekt.........lGrkGiGmklAslklgrkvtviskkegeks.t 100
                 ++ e  + el+ N+ dA  +                   +ki++d+d     +++i D G Gm+k++lv +l ++++s +++  e+ +         +G++G+G  ++++ +++kv v sk++++++  
  MMETSP1325-20131115|1980_1  86 KNkEIFLRELISNASDALDKIrflavsdesalgdtkeleIKIKFDKD---ARTLTIIDTGVGMTKADLVANLgTVAKSGTTNFVEALSgdgggdlslIGQFGVG-FYSVYLVADKVRVASKNNDDDQyI 210
                 55577799********7655556666667888888886666666665...69*****************9662555555554333333567778888*******.****************99988743 PP

>> PF02518.21  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.1   1.3e-12   3.5e-09       6     109 ..      92     241 ..      87     243 .. 0.84

  Alignments for each domain:
  == domain 1    score: 36.2 bits;  conditional E-value: 1.3e-12
                 HHHHHHHHHHHHHHHHHHH..............SEEEEEEEEECTCEEEEEEE-----TH...........HHHHHHCSTTTCCSC..SSGGGTT----THHHHHHCCEEEEEEEEECTC.......................T-CEEEEEEEE CS
  PF02518.21   6 lrqivselvdNavkatees..............geievrvkreegelvieVeDnGiGipe...........edlervfepffqtdd..dsrkvggtGlGlsivkklvellggeieveske.......................ggGttvtlrlp 109
                 l    +el++Na +a ++               +e+e+++k +++  ++++ D+G G+++           +   + f +  ++d+  d + +g++G+G+++v ++++++++  + ++ +                       g+Gt++tl l+
  MMETSP1325-20131115|1980_1  92 L----RELISNASDALDKIrflavsdesalgdtKELEIKIKFDKDARTLTIIDTGVGMTKadlvanlgtvaKSGTTNFVEALSGDGggDLSLIGQFGVGFYSVYLVADKVRVASKNNDDDqyiwestadsnfviakdprgnslGRGTEITLFLK 241
                 4....55555555555555555599999********************************99998888887777777777777777**************************95544444999999999******************9999887 PP

>> PF10366.4  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   9.8e-05      0.27      51      83 ..     453     485 ..     435     505 .. 0.74
   2 ?   -3.5   0.0       3.4   9.4e+03      84      98 ..     704     718 ..     691     728 .. 0.53
   3 ?   -3.3   0.1       2.9     8e+03      56      69 ..     755     774 ..     730     790 .. 0.43

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 9.8e-05
   PF10366.4  51 gkklheeALeLLkkladeeeedkedsslkgeke 83 
                 gkkl ++ALe+L+kla+++ +d+ed+ ++ e+e
  MMETSP1325-20131115|1980_1 453 GKKLVRKALEMLRKLASKKGDDEEDEDEESEDE 485
                 68999************9444444444443333 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 3.4
   PF10366.4  84 tiiqylqklseedld 98 
                 +i++ l+k+++e   
  MMETSP1325-20131115|1980_1 704 LIVELLNKVETETDS 718
                 345555555444433 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 2.9
   PF10366.4  56 eeALeLLkklade......e 69 
                 ++AL+L   l  e      e
  MMETSP1325-20131115|1980_1 755 AKALDLESGLELEeevevpE 774
                 45555544443333343332 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  12.1   0.00059       1.6      46      88 ..     276     321 ..     261     355 .. 0.61
   2 ?    7.2   3.7   0.00058       1.6      38      75 ..     457     492 ..     422     496 .. 0.50
   3 ?    4.3  10.4    0.0044        12      33      74 ..     755     796 ..     735     798 .] 0.52

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00059
   PF10446.4  46 eeealeeed..ededdeeddddeDeddddddddeDdedde.ldddd 88 
                 e   +e+ed  eded e+d +deD +  ++d+++D+edde + +  
  MMETSP1325-20131115|1980_1 276 ETVEVEDEDedEDEDGESDGEDEDLEVSEEDEYDDEEDDEpETQTI 321
                 3333333340044444444444444455666666666666333333 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.00058
   PF10446.4  38 irklgeeaeeealeeedededdeeddddeDeddddddd 75 
                 +rk  e   + a ++ d++ed++e+++  De++dd++d
  MMETSP1325-20131115|1980_1 457 VRKALEMLRKLASKKGDDEEDEDEESE--DEEADDEED 492
                 333333333444444433333333322..333333333 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.0044
   PF10446.4  33 kkelairklgeeaeeeal.eeedededdeeddddeDedddddd 74 
                 +k l +   g e eee +  eededed++ed++deDed+d +d
  MMETSP1325-20131115|1980_1 755 AKALDLES-GLELEEEVEvPEEDEDEDEDEDEEDEDEDEDGHD 796
                 44444433.3444444430444444444444444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (798 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1077  (0.0787741); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                        37  (0.00270626); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.56u 0.39s 00:00:01.95 Elapsed: 00:00:00.76
# Mc/sec: 2516.17
//
Query:       MMETSP1325-20131115|1987_1  [L=300]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-11   43.1   2.7    3.1e-11   43.1   1.8    1.6  2  PF02656.10 Domain of unknown function (DUF202)


Domain annotation for each model (and alignments):
>> PF02656.10  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   1.8   2.3e-15   3.1e-11       3      71 ..     191     257 ..     189     259 .. 0.85
   2 ?   -3.9   0.2         1   1.4e+04      54      61 ..     284     291 ..     279     297 .. 0.40

  Alignments for each domain:
  == domain 1    score: 43.1 bits;  conditional E-value: 2.3e-15
  PF02656.10   3 hlAnERTfLaWlRtslalaavglallrlflldhssssas.rnaakilglllialailtllygivrylrrk 71 
                 hlAnERT LaW+Rt+++l++ gl l  +++ ++s+   + +++  ++g ++i+   +t++ g+vry ++k
  MMETSP1325-20131115|1987_1 191 HLANERTWLAWIRTTFSLLSCGLSLQSYANDSSSG---TwHWWLFLVGCAAILSMDFTFITGWVRYSKVK 257
                 9***********************99997655433...237777788888888888**********9986 PP

  == domain 2    score: -3.9 bits;  conditional E-value: 1
  PF02656.10  54 alailtll 61 
                  ++++t +
  MMETSP1325-20131115|1987_1 284 FATLCTVA 291
                 22222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.36s 00:00:00.94 Elapsed: 00:00:00.49
# Mc/sec: 1467.16
//
Query:       MMETSP1325-20131115|1985_1  [L=553]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-46  157.3  19.0    4.2e-46  157.1  13.2    1.1  1  PF06814.8 Lung seven transmembrane receptor


Domain annotation for each model (and alignments):
>> PF06814.8  Lung seven transmembrane receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.1  13.2   3.1e-50   4.2e-46       4     293 ..     163     461 ..     160     463 .. 0.91

  Alignments for each domain:
  == domain 1    score: 157.1 bits;  conditional E-value: 3.1e-50
   PF06814.8   4 tGlYslifskcdeel.......sksksslklkvkvnwknpeGyLsaseapllplylimslayvllgilWlfilakykkdvlklqkliaavialgmvelafvyleyatinskGss....ievlavlasilsalkktlsrllllivslGygivkpkLgdllkkvlllgvllfvlaevlelvresseesdssakllkellfllplalldlifvlwifrsLsktlrkLklrrnlvklelYrkfaivlvisvvasliiilvekvllktvdsvekqWkeaWlitafwellslvllvviaylwrPsqn 293
                 tG+ s+++  c++         s +++++++k+++++knp+GyLsa  +  +p+ +  ++++ l+g+l+++il+ + + v+k++++i+av+ + ++e + + + y+ +n +G +      v  v+a+ ++ l++tlsr llli+++Gygiv+ +L++++  ++ l  l   +a+v+  ++ ++e++d     ++      p+ + dl f++wi  sL + + +L++  +  kl +Y+k+a+++ + v+++ i  lv   +l +  ++   W+  W+ t  we+l l++lv +a+lwrP++ 
  MMETSP1325-20131115|1985_1 163 TGIQSVVIELCYQTDedsaklaSVPDATISFKGTLTFKNPYGYLSAIYFGYIPFEACRAIIFGLFGALYVVILVLKSERVIKVHYFITAVVWTVAIEALCWFMAYVLMNTQGDPyccpFPVPVVVAMCFEMLRRTLSRSLLLIICMGYGIVRDTLEKKEILMVSLLSLAYLVASVMVDAHDIAEINDIGRSTQHSPWWDFPVLVFDLTFLIWIYLSLVNIMANLRATGQSFKLTMYTKLANTMGVFVIFVSILTLVI--VLAREGTFAWPWQLYWMQTVAWEVLNLAVLVAVAFLWRPTEY 461
                 6666777666665444555667889999**************************************************************************************999888899999********************************99988887777777778877888999999888888899999*******************************************988888877777766..5679999*********************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       634  (0.0463721); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.32s 00:00:01.19 Elapsed: 00:00:00.78
# Mc/sec: 1698.96
//
Query:       MMETSP1325-20131115|1986_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-05   22.0   4.2    0.00022   20.7   3.0    1.7  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.028   13.9   3.6       0.15   11.6   2.5    2.2  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
      0.045   13.7   0.0       0.11   12.5   0.0    1.5  1  PF07436.6  Curtovirus V3 protein
       0.31   10.7   2.8        5.5    6.7   2.1    2.3  2  PF07191.7  Protein of unknown function (DUF1407)
       0.45   10.1  11.5       0.63    9.7   5.4    2.7  3  PF13639.1  Ring finger domain
       0.47   10.1  11.4       0.16   11.6   4.7    2.4  2  PF13923.1  Zinc finger, C3HC4 type (RING finger)
        0.5   10.1   5.6        3.1    7.5   3.9    2.1  2  PF12773.2  Double zinc ribbon
       0.52    9.7   5.9         19    4.7   1.5    3.5  3  PF14169.1  Cold-inducible protein YdjO
        1.3    8.7   7.1        1.1    8.9   0.6    2.9  3  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger


Domain annotation for each model (and alignments):
>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   3.0   1.4e-07   0.00022       2      47 ..      77     130 ..      76     133 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.4e-07
   PF13920.1   2 kktCvvClereadvlllp.........CgHlclCeeCaerllkrkkkCpiCrspi 47 
                 +k C++C e + dv ll+           H+ +C  C  ++++++++Cp Cr+++
  MMETSP1325-20131115|1986_1  77 QKLCPICSEMRDDVELLEhatnikgdiSDHQ-ACGYCRANMIRTNASCPWCRTEM 130
                 689**********9999888888888889**.********************986 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.5   9.9e-05      0.15       1      41 []      80     126 ..      80     126 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.9e-05
                 -TTTSSS-SSEE.........BSCTS-EE-CHHHHHHHCST-----TTT CS
  PF00097.20   1 CpiCleeakepn........elleCkHsfCskCirkilksrkkvkCPlC 41 
                 CpiC e+  +          + +  +H+ C  C  ++++  ++ +CP C
  MMETSP1325-20131115|1986_1  80 CPICSEMRDDVEllehatniKGDISDHQACGYCRANMIR--TNASCPWC 126
                 88888888877788888777666668*************..9999**99 PP

>> PF07436.6  Curtovirus V3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.1e-05      0.11      12      61 ..     256     305 ..     255     315 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.1e-05
   PF07436.6  12 fifsillqagtnvygtlqsgsisrklsklasrfdelflklqqvvytryas 61 
                 fi++   qa+t +  ++ sgs +  l kl+ r   l + + +  yt  +s
  MMETSP1325-20131115|1986_1 256 FIAAWYQQACTALLCAMLSGSSTTTLIKLVQRAGGLTVSVFDAHYTNKSS 305
                 8899999**********************************999998877 PP

>> PF07191.7  Protein of unknown function (DUF1407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.1    0.0036       5.5      16      40 ..     105     130 ..      77     132 .. 0.59
   2 ?    3.8   0.1     0.029        45       2      15 ..     121     134 ..     120     138 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0036
   PF07191.7  16 eeahCeaCqkd.fkkealCpdCeqeL 40 
                 ++  C +C+++ ++++a Cp C++e+
  MMETSP1325-20131115|1986_1 105 DHQACGYCRANmIRTNASCPWCRTEM 130
                 56667777655246667777777665 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.029
   PF07191.7   2 lkCPkCqseleskg 15 
                 ++CP C++e+ +++
  MMETSP1325-20131115|1986_1 121 ASCPWCRTEMVWRN 134
                 58********9987 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.2     0.076   1.2e+02      36      44 ..      76      84 ..      69      86 .. 0.76
   2 ?    9.7   5.4   0.00042      0.63       3      45 ..      80     128 ..      78     129 .. 0.71
   3 ?   -1.0   0.1      0.89   1.4e+03      21      36 ..     242     263 ..     226     272 .. 0.64

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.076
   PF13639.1 36 ssnsCPlCr 44
                +++ CP+C 
  MMETSP1325-20131115|1986_1 76 EQKLCPICS 84
                567899996 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00042
   PF13639.1   3 CaiCldelse...geevvrlpC...gHvfHeeCldewlrssnsCPlCrk 45 
                 C+iC +  ++    e+++ ++     H  +  C + ++r++ sCP Cr+
  MMETSP1325-20131115|1986_1  80 CPICSEMRDDvelLEHATNIKGdisDHQACGYCRANMIRTNASCPWCRT 128
                 88888766545443333333223338**********************8 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.89
   PF13639.1  21 C......gHvfHeeCldewlrs 36 
                 C      +H  He+ +++w ++
  MMETSP1325-20131115|1986_1 242 CfsifenNHGGHEDFIAAWYQQ 263
                 5444444777788888888764 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   4.7   0.00011      0.16       2      46 .]      77     128 ..      76     128 .. 0.80
   2 ?   -0.6   0.1      0.69   1.1e+03       7      26 ..     241     270 ..     240     273 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00011
   PF13923.1   2 rfsCpiCleelen........pviltpCg.....HlyCkkCieqwlekskkkCPiCrn 46 
                 ++ CpiC e   +                     H  C  C  +++++ +++CP Cr+
  MMETSP1325-20131115|1986_1  77 QKLCPICSEMRDDvellehatN-----IKgdisdHQACGYCRANMIRT-NASCPWCRT 128
                 568****999999999864432.....3334555**************.*******96 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.69
   PF13923.1   7 iCleelen..........pviltpCgHlyC 26 
                  C++++en          +++   C  l+C
  MMETSP1325-20131115|1986_1 241 SCFSIFENnhgghedfiaAWYQQACTALLC 270
                 588998887888887777777777777777 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1      0.12   1.9e+02      26      37 ..      74      85 ..      58      92 .. 0.72
   2 ?    7.5   3.9     0.002       3.1      10      49 ..      75     126 ..      70     133 .. 0.72

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.12
   PF12773.2 26 taeevlCpsCge 37
                 ae++lCp C e
  MMETSP1325-20131115|1986_1 74 AAEQKLCPICSE 85
                445567777766 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.002
   PF12773.2  10 sgarfCpqCgaklk...............eataeevlCpsCgesvspkarfCpnC 49 
                 ++ + Cp C ++                 +   ++++C  C ++++ +++ Cp C
  MMETSP1325-20131115|1986_1  75 AEQKLCPICSEMRDdvellehatnikgdiS---DHQACGYCRANMIRTNASCPWC 126
                 566778888777777778888888875532...3346888888888888888888 PP

>> PF14169.1  Cold-inducible protein YdjO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.023        34      38      57 ..      76      94 ..      72      96 .. 0.82
   2 ?    4.7   1.5     0.013        19      28      50 ..     110     131 ..     104     135 .. 0.79
   3 ?   -1.7   0.0       1.2   1.9e+03       7      27 ..     315     335 ..     311     340 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.023
   PF14169.1 38 eeplCplCkseMvkeerlLp 57
                e+ lCp+C seM ++++lL 
  MMETSP1325-20131115|1986_1 76 EQKLCPIC-SEMRDDVELLE 94
                6789****.79999999885 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.013
   PF14169.1  28 GWmRdnFsfeeeplCplCkseMv 50 
                 G+ R n     + +Cp C +eMv
  MMETSP1325-20131115|1986_1 110 GYCRANMIRT-NASCPWCRTEMV 131
                 8888887655.499********8 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 1.2
   PF14169.1   7 nkeevpeeetevweCtsedCn 27 
                 n e v+ +e  vw+ +++d  
  MMETSP1325-20131115|1986_1 315 NPEYVQAVEEMVWNGAADDPD 335
                 66778889999**99999865 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         1   1.6e+03      70      78 ..      76      84 ..      71      92 .. 0.67
   2 ?    8.9   0.6   0.00074       1.1       9      39 ..      94     127 ..      86     131 .. 0.76
   3 ?    2.0   0.1      0.11   1.7e+02      52      77 ..     248     273 ..     238     280 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 1
   PF12861.2 70 skglcpmcr 78
                 ++lcp+c 
  MMETSP1325-20131115|1986_1 76 EQKLCPICS 84
                466777775 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00074
   PF12861.2   9 ksvatwswdvasddvcGicrvsf...dGtcpsck 39 
                 +  ++ + d+++++ cG cr++    + +cp c+
  MMETSP1325-20131115|1986_1  94 EHATNIKGDISDHQACGYCRANMirtNASCPWCR 127
                 55567788999*********86533389999997 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.11
   PF12861.2  52 ckhnfhlhcilkwletetskglcpmc 77 
                  +h  h+  i  w ++  +  lc m 
  MMETSP1325-20131115|1986_1 248 NNHGGHEDFIAAWYQQACTALLCAML 273
                 578899*****************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.68
# Mc/sec: 1222.85
//
Query:       MMETSP1325-20131115|1989_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-23   81.3   0.0    9.4e-23   81.0   0.0    1.1  1  PF00233.14 3'5'-cyclic nucleotide phosphodiesterase
  ------ inclusion threshold ------
      0.075   12.8   0.1       0.12   12.1   0.1    1.3  1  PF02471.12 Borrelia outer surface protein E


Domain annotation for each model (and alignments):
>> PF00233.14  3'5'-cyclic nucleotide phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   0.0   1.4e-26   9.4e-23     104     205 ..       3     130 .]       1     130 [] 0.92

  Alignments for each domain:
  == domain 1    score: 81.0 bits;  conditional E-value: 1.4e-26
  PF00233.14 104 dlvieiilaTDlslhlkklkrlkkmveqkkv........................ldld....dkikvlsllltaaDlSnvtkplkvskriaelimeEFfeqgdlErelglkpspmcdrekaeveksqvg 205
                 + + e il TD+  h+ ++ +l++  e++ v                                ++ ++ ++ l+aaDlSn+ kpl v+++++++++eEFf+qg++Er +g ++s m+dr ++ ++++qvg
  MMETSP1325-20131115|1989_1   3 KQIVECILNTDMVNHFGNVGKLQNFFEVSGVevsnfvnavasgaadvavpevftdA--VegpkNRLLLQETFLHAADLSNPVKPLAVYQKWVHRVTEEFFSQGEKERSVGFPVSAMMDRATTNIPNMQVG 130
                 67899***********************98899***************99987550..2455578888899*********************************************************97 PP

>> PF02471.12  Borrelia outer surface protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.8e-05      0.12      39      66 ..      13      47 ..       2      52 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.8e-05
  PF02471.12 39 g.......aGhsatffsleesevnnfvkamtegGs 66
                +       +G   +ff +   ev nfv+a+  g +
  MMETSP1325-20131115|1989_1 13 DmvnhfgnVGKLQNFFEVSGVEVSNFVNAVASGAA 47
                3333355578999****************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.60
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|1990_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.61
# Mc/sec: 353.56
//
Query:       MMETSP1325-20131115|1991_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.53
# Mc/sec: 1008.28
//
Query:       MMETSP1325-20131115|1992_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1268.07
//
Query:       MMETSP1325-20131115|1988_1  [L=874]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-14   52.5   0.0      6e-14   51.6   0.0    1.3  1  PF00795.17 Carbon-nitrogen hydrolase
  ------ inclusion threshold ------
      0.027   14.2   3.8      0.099   12.4   0.1    3.6  3  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00795.17  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0   8.8e-18     6e-14      34     162 ..     105     212 ..      72     224 .. 0.78

  Alignments for each domain:
  == domain 1    score: 51.6 bits;  conditional E-value: 8.8e-18
                 ---BEE--TTS------....SHHHHHHH-------HHHHHHHHHHHHT-B--EE.E---TSS-..-B-EEEEE-----EEEEEE-SS-.....-T.TT---B------.-B-----....--EEEEETT-- CS
  PF00795.17  34 gadlivlPElgitgyahwlglgatealelaetlraevlaalsalarkagitviaG.aaekdegg..lyntlvllsadgellgkyrkrhlvpfgmwqpersllgeggatapvfdtpvvavaggklglliCyEi 162
                 + d+++lPE ++  +           ++++ +++ e l+ l ++a+k+++++iaG ++ek++g   +y+t+v++s++ge++ +yrkrh+ p+g  +     l +g      fdt+ +    g  ++liCy+ 
  MMETSP1325-20131115|1988_1 105 KPDFVILPEGWMNVF-----------GAASLETN-ESLRPLAEVAAKNQVYLIAGtMVEKNPGApeVYCTSVVFSRSGEIICSYRKRHM-PGGSTT-----LDQG-DGPGHFDTE-F----GPCAVLICYDA 212
                 446999999888855...........55666665.8999****************55555444477***********************.444444.....6677.566679**9.9....9********94 PP

>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.13   9.1e+02      11      28 ..     158     175 ..     154     175 .. 0.85
   2 ?   -2.0   0.0       0.5   3.4e+03      17      35 ..     589     610 ..     581     610 .. 0.62
   3 ?   12.4   0.1   1.5e-05     0.099      28      39 .]     799     810 ..     798     810 .. 0.95

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.13
                 SSSEEEEEEESSSTEEEE CS
  PF00400.27  11 tspVtcvafspdgpllas 28 
                 +  +t+v fs +g +++s
  MMETSP1325-20131115|1988_1 158 EVYCTSVVFSRSGEIICS 175
                 5679********999987 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.5
                 EEEESS...STEEEEEETTSEE CS
  PF00400.27  17 vafspd...gpllasgSrDgti 35 
                 v+f+ +   + ll  g +Dgt+
  MMETSP1325-20131115|1988_1 589 VSFAAStagPLLLGVGMDDGTV 610
                 5566667744455555588886 PP

  == domain 3    score: 12.4 bits;  conditional E-value: 1.5e-05
                 EEETTSEEEEEE CS
  PF00400.27  28 sgSrDgtirlWd 39 
                 s+SrD+t+rlWd
  MMETSP1325-20131115|1988_1 799 SASRDRTVRLWD 810
                 9**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (874 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.15u 0.39s 00:00:01.54 Elapsed: 00:00:00.83
# Mc/sec: 2523.39
//
Query:       MMETSP1325-20131115|1993_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-14   52.2   0.9    2.8e-13   49.5   0.0    2.6  3  PF04616.9 Glycosyl hydrolases family 43
  ------ inclusion threshold ------
       0.11   12.6   0.1        1.4    9.0   0.0    2.2  2  PF04773.8 FecR protein


Domain annotation for each model (and alignments):
>> PF04616.9  Glycosyl hydrolases family 43
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.19   1.3e+03     120     199 ..      41      60 ..      24      81 .. 0.61
   2 !   49.5   0.0     4e-17   2.8e-13      35     224 ..      95     287 ..      88     319 .. 0.81
   3 ?   -1.3   0.0      0.12   8.3e+02      22      50 ..     316     343 ..     304     358 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.19
                 ---EEEE-S---EEEEE--B....SB---EEEEEETTTTEEEGEE-EE------TTTT---EEEEEEE----EEEEEEES CS
   PF04616.9 120 iDpslfvdddGkkYlvwgqwdkregkseiylqelsndgkklkgkktkliykgtelkglkvtEGphlykrngyyYLtaaeg 199
                 +D ++ +d + k +l                                                             +  g
  MMETSP1325-20131115|1993_1  41 HDGNVWFDAKEKTWLW------------------------------------------------------------YGMG 60 
                 3444444444444444............................................................4444 PP

  == domain 2    score: 49.5 bits;  conditional E-value: 4e-17
                 EEEEEESSSSS-EEEE-SEESTTT-TTB----...ESEEEEE--EEEEEEEE......-BTT----BEEEEEESS-----EEEEEEEE-.-------EEEE-S-...--EEEEE--B....SB---EEEEEETTTTEEEGEE-EE------TTTT---EEEEEEE----EEEEEE..ES---TT-EEEEEEESS-----EE-TT CS
   PF04616.9  35 vpifhSkDLvnWkqvgevlerrsqldmkgnnas..WAPeisyhdgkfylyyt......vkkasktkgiyvvtadspkGpwsdpiklkts.nssgiDpslfvddd...GkkYlvwgqwdkregkseiylqelsndgkklkgkktkliykgtelkglkvtEGphlykrngyyYLtaa..eggtgeeyavgvarsksllgpyewkks 224
                 v++++S DLv W+ vg+v+ +  + ++        + P+ +++   +  y +      +  +  + +  v+t+++++Gp++ +   +   n +g D +++ d +   G +Yl++  w ++    ++++ +l++d++ + g++   +++g+     + +E+p l++r+g+yYL++   ++ +++   + v ++ ++lgp+e++++
  MMETSP1325-20131115|1993_1  95 VNLYSSPDLVSWTYVGDVFPQGGRPEGIYFRPKvlFNPASEEYV-LWINYLPpalnplI--SYPEATFSVATSKTAAGPFELKTPSVNIaNPGGGDFTVMADPNavdGAAYLAYDAWSNG---HTVVIEQLTDDWHDSLGNA---STTGA--LSEEKNEAPILFERKGTYYLLYGhtCCFCRQGSGAIVMTAPDPLGPWEMASD 287
                 789****************9999988644332234666554442.34444447775321..44556699***********9888765557************97778************9...99*************9999...33333..34578*****************9777777877878889999*******9876 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.12
                 EEEEEEETTEE-EEEEEEESSSSS-EEEE CS
   PF04616.9  22 yYlvtstfeefpgvpifhSkDLvnWkqvg 50 
                  Yl+t +  +++     +S DL+ W   +
  MMETSP1325-20131115|1993_1 316 QYLYTGDL-WTSAPDHLKSHDLQYWYPLE 343
                 58888876.88888999999999998765 PP

>> PF04773.8  FecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.064   4.4e+02      32      55 ..      28      51 ..      13      54 .. 0.70
   2 ?    9.0   0.0   0.00021       1.4      50      84 ..     160     193 ..     156     202 .. 0.75

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.064
   PF04773.8 32 dasegrrerevkllkGevlvdvak 55
                +a+ + + + ++++ G+v++d+++
  MMETSP1325-20131115|1993_1 28 AARVDVDGQLMDVHDGNVWFDAKE 51
                444566667789999999999986 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00021
   PF04773.8  50 lvdvaksakrpfevetpsatigvrG.TeFsvsvrdd 84 
                 +v ++k a++pfe++tps++i+  G  +F  +v +d
  MMETSP1325-20131115|1993_1 160 SVATSKTAAGPFELKTPSVNIANPGgGDF--TVMAD 193
                 56677778899**********98886799..55444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 1866.10
//
Query:       MMETSP1325-20131115|1996_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.058   12.8   0.2      0.068   12.6   0.2    1.1  1  PF07937.6 Protein of unknown function (DUF1686)


Domain annotation for each model (and alignments):
>> PF07937.6  Protein of unknown function (DUF1686)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2     5e-06     0.068     126     170 ..       5      48 ..       2      63 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5e-06
   PF07937.6 126 slvcvglvvfaallllvsivekgeggekveserkgavvksvllvm 170
                 ++++v  v +++l++l  ++ ++++ge v+ +++  vv+  l+v+
  MMETSP1325-20131115|1996_1   5 KYLQVTGVGLVILIVLALYA-QASKGEVVSVDVMDSVVQMYLFVT 48 
                 6778889999999999****.699*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       596  (0.0435927); expected 273.4 (0.02)
Passed bias filter:                      487  (0.0356202); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|1995_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-62  208.5   0.0    1.1e-61  208.2   0.0    1.1  1  PF00481.16 Protein phosphatase 2C
    6.4e-07   28.8   0.0    1.5e-06   27.6   0.0    1.5  1  PF13672.1  Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.2   0.0   1.7e-65   1.1e-61      14     256 ..       3     284 ..       1     285 [. 0.88

  Alignments for each domain:
  == domain 1    score: 208.2 bits;  conditional E-value: 1.7e-65
                 HHHHHHHH----SST.....HCCCHHCCCHCCCHHHHHHHHHCHHHHHH....HHHHHHHHTTXX.............XXGGHCHHHHHH.HHCHHHHHHCCS..HTT---EEEEEEESSSEEEEEEE---EEEEEE---EEEESS---STTSHHHHHHHHH----EE-T--EE---BSBSB----HHHC---........................ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHHHHHHHHHHHHHHHTHHHHHTS-SSHHHHHH.HHHHH CS
  PF00481.16  14 smedahialknleks.....sgkssvaffavfdghggreaakyarehle....eilkerksflele............klekalrksfladtdeelksseant.epsksGstavvalirgqklyvAnvGDSravLcrsdnakkeltedHkpsnedEreRIeeaggsvsngngRvngsLavsRalGdfelkpke........................keqlvsaePdvtsvkideedefliLasDGlwdvlsdqeavdlvrselskkkspmeaaeelvdeaiar.gsedn 256
                 smed+ i  ++++        + s+    +++dghgg++a++y  +hl+    ++l++   +l ++             +  al +sf   td e+++    t e+ + Gsta+++l+ g++ y+ nvGDSr+vLcrs++a   l+ dHkps+edE++RI++agg+++   +Rv g LavsRa+Gd e+k++                         +++l++aeP+v+ +++++ d+fl+La+DGl+dvl++qea+dl+ se+  +++ ++aae+l + ai+  gs+dn
  MMETSP1325-20131115|1995_1   3 SMEDKSIMVQDMRVPelravAPFSPQTWMGIYDGHGGTQASQYLWQHLHenvsNSLAKVAPKLGDAsasgadialiddIVISALTESFVH-TDREFMR----TaEHAQAGSTATTVLLLGDRAYCGNVGDSRTVLCRSGEAL-PLSDDHKPSREDEAARIKAAGGFII--HKRVMGELAVSRAFGDAEFKKGIneilgddapiagggradinpetdlSKPLIIAEPEVQAITLSPADDFLLLACDGLFDVLTNQEACDLILSEMARHGDVQRAAEALSRNAIDDcGSRDN 284
                 677777777777666666666667778899*******************76663333333333333699999998877778888888888.8888887....3478************************************.*************************..9*******************977************************999*************************************************************974366666 PP

>> PF13672.1  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   2.3e-10   1.5e-06      29     207 ..      33     272 ..      21     274 .. 0.68

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 2.3e-10
   PF13672.1  29 VaDGaGsakrSdeGsrlaveaagealeell....eeeeeq.....eeallrailneilaevk.lkaeaeaqqeelkdyatTlllavitpgeivffqiGDgaivvrdrdgevqllgepds...................geyanettfltsedaeeel.....................................................rvrrlklepv.dalllmTDGlsnslrdeeafapllkelleeleeegaaeeLa 207
                 + DG+G ++ S+   + + e++ + l++      +    +     + al+++i+  +l+e+  + +++  + +e  + ++T + +++ +++++++++GD++  v  r+ge+ +l+++++                   +                                                                       +v+ ++l+p  d lll  DGl + l+++ea   +l e+ ++ + + aae+L+
  MMETSP1325-20131115|1995_1  33 IYDGHGGTQASQYLWQHLHENVSNSLAKVApklgD----AsasgaDIALIDDIVISALTESFvHTDREFMRTAEHAQAGSTATTVLLLGDRAYCGNVGDSRT-VLCRSGEALPLSDDHKpsredeaarikaaggfiihK-----------------RvmgelavsrafgdaefkkgineilgddapiagggradinpetdlskpliiaepEVQAITLSPAdDFLLLACDGLFDVLTNQEACDLILSEMARHGDVQRAAEALS 272
                 66788777665554444444444444444444430....1455666677777775555444454444444456666777777777888**************.5679*********99944444443333333222220.................13444455555666677778888888888888888888888888888888888888889965554899999************99999999998887777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1338.34
//
Query:       MMETSP1325-20131115|1998_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.62    9.1  15.7       0.77    8.8  10.8    1.1  1  PF00529.15 HlyD family secretion protein
        1.5    8.2  18.6    1.4e+02    1.7  12.9    2.1  1  PF03286.9  Pox virus Ag35 surface protein
        2.9    6.2   8.2        3.3    6.0   5.7    1.0  1  PF04559.7  Herpesvirus UL17 protein
        3.9    6.9  14.6          6    6.2  10.1    1.2  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  10.8   0.00023      0.77      79     222 ..      35     183 ..      14     196 .. 0.67

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00023
                 .-HHHHHHHHHHHHHH............HHHHHHHHHHHHTTEEE-S--.-----BSS-B------.......---S-SEEEEEESSEEEEEEE-HHHHHHHHHHHH-----B----EE-EEEEE---..-BES----EEESEE..EE------EEE CS
  PF00529.15  79 esekeadaarrearealaasqa..laaskaeleaardnlasaeaalpaslgsikasqatlgalltn.......lqaqglaakaqldeaklqlaqtaaelarsirapaqgervqeesklrsvqvgeevs..vgspllgvvpfedv..evdanlketql 222
                 +++k  +++++  re+ +as +  l++  a+ +aa++  + ++a+++ ++ ++k+ ++t +a+ t+        +++++a + ++++ k++l++ a e ar+ +++a++e++++      +  g  ++  vg ++ + v+++dv  + da ++  ++
  MMETSP1325-20131115|1998_1  35 AKTKVDTERMV--REQ-MASEKlrLQSKLATEKAAKEEKEKELALMKEEMERYKELANTSNADKTAleeaaikAEQEAAAHREKVATEKRALEEKA-EKARLEEERARAEMQAQ----KDALEGKGAGkgVGLSISSDVDQSDVmaYADAIVEALTA 183
                 44444444444..444.6666668999999999999999999999999995555555555555555555555558888899999999999997777.77999999999999998....777777777777888888888777642255555555555 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7  12.9      0.04   1.4e+02      30     145 ..      24     184 ..      14     188 .. 0.53

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.04
   PF03286.9  30 nadkveddifpeDieiPvsekkpkkkrkttkrk...pvkkkkskkkekekeeeeekkeeededk..............................dteenendddekeeskdskesasaneqsdeddede...........................................ideSdLkvatenIikdlkkl 145
                 + +k +dd++ +  ++  +e+  +++ ++ k +   +++++k++k+ekeke    k+e e +++                                           e+                                                               +d+Sd +  +++I++ l ++
  MMETSP1325-20131115|1998_1  24 DPQKEKDDLLIAKTKVD-TERMVREQMASEKLRlqsKLATEKAAKEEKEKELALMKEEMERYKElantsnadktaleeaaikaeqeaaahrekvA-----------TEK-------------------RaleekaekarleeeraraemqaqkdalegkgagkgvglsissdVDQSDVMAYADAIVEALTAI 184
                 44566777777766666.33333333333333334456677777777777766555555555554444444443333333333222222221110...........111...................11222222334444444555555555577777777778888777**************999876 PP

>> PF04559.7  Herpesvirus UL17 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   5.7   0.00097       3.3     146     273 ..      35     163 ..      29     194 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00097
   PF04559.7 146 egtrynadaerlralcrqllayt.rlpaalpsaakeaaahleac..................apgafdeaaaearlkddfdeilslikraaeavnkraPv...aavasgllqgalasllagrresaahlgaLEpPgkvRGrekgarrsra 273
                 ++t    +++  r++ +q+++   rl+++l   a+e aa+ e+                   +++a+++a +ea++k++ ++  +           r+ v   ++ + +  ++a+ +  ++r+e +a+ +aLE  g + G++ +    ++
  MMETSP1325-20131115|1998_1  35 AKT----KVDTERMVREQMASEKlRLQSKL---ATEKAAKEEKEkelalmkeemerykelanTSNADKTALEEAAIKAEQEAAAH-----------REKVateKRALEEKAEKARLEEERARAEMQAQKDALEGKGAGKGVGLS---ISS 163
                 444....33446688899999999999999...4555555555566788888855554444444444444444444433333333...........33334447888888888888889999****************999875...344 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  10.1    0.0018         6      52     165 ..       8     146 ..       5     151 .. 0.47

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0018
   PF04156.9  52 Llalgllllllkapvqseedekiee............................srlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrs 165
                 + ++g++  ++k ++   ++ek +                              ++++ + e e++l+ + ee+e+  e  +++ ++ ++lee+  +++   ++ +++ e+++ +  +l+++ ++ r e +++++e+q ++ 
  MMETSP1325-20131115|1998_1   8 SAMGGMSKMQYKNKRRDPQKEKDDLliaktkvdtermvreqmaseklrlqsklATEKAAKEEKEKELALMKEEMERYKELANTSNADKTALEEAAIKAE---QEAAAHREKVATEKRALEEKAEKARLEEERARAEMQAQKD 146
                 555555555555554444443333355666665555555556666633333332333344444444444445555555555555555555555555555...5555555555555555555555555445555566555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2215  (0.16201); expected 273.4 (0.02)
Passed bias filter:                      639  (0.0467379); expected 273.4 (0.02)
Passed Vit filter:                       102  (0.0074605); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.85u 0.44s 00:00:01.29 Elapsed: 00:00:00.56
# Mc/sec: 847.28
//
Query:       MMETSP1325-20131115|1999_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 1107.12
//
Query:       MMETSP1325-20131115|1994_1  [L=677]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-59  201.8   1.4    1.9e-59  201.5   1.0    1.2  1  PF00884.18 Sulfatase
  ------ inclusion threshold ------
      0.047   12.8   1.7        1.3    8.1   1.2    2.3  1  PF01663.17 Type I phosphodiesterase / nucleotide pyrophosphatase


Domain annotation for each model (and alignments):
>> PF00884.18  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.5   1.0   2.7e-63   1.9e-59       1     333 [.      57     493 ..      57     603 .. 0.79

  Alignments for each domain:
  == domain 1    score: 201.5 bits;  conditional E-value: 2.7e-63
                 -EEEEEEEST--CCHCCHB---SCSSHHHHHHHCSSEEESSEE-SCSSHHHHHHHHHHS--CCCH--HCCT..TT..CBTTTTS--HHHHCCCGT-EEEEE----TCGGGHHCCCHH----CCC-....CCCCGGGCSC-EEETTTE.......................S.GGGSHHHHHHHHHHHHH...HHCT.TSSEEEEEE--TTSSS----TTTTTSS-GGGS....................HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEEE-----GGG..HHH-TT----HHHHHHCCBEEEEEEE----TT.........EE-S-EEGGGHHHHHHHH---.....--TTST-----TH.HHH----............................................................S CS
  PF00884.18   1 pnvvliladdlgagdlglyggptrttpnldrlaeegllftnfysaapltspsraalltgryphntgvtsnteygg..gglprteetLpellkqaGYntaaigkwhlgwlsrqsvyknrGFdrflgfptgednlknpedveynnsvlr.......................ppeggysdealldealefl...larn.dkPfflylatlgpHappyapdeyaekyatffddgeeka..............rqleaylnsveyvDdaigrvlaaLeenglldnTlvvftSDHgaslee..gngplrggkgvnayeggtrvPllvwwpggkap........rvseelvshvDlaptildlagilpkvegpkdrlldgksll.ptlegka............................................................q 333
                 pnvv +++ddlg++d+g ++     tp++d+la++g+++ +fy+a p ++psr++++tgry++++g+ ++  + +   g p te++L + l++ GY+t aigkwh+g+   +  +  rGFdr +g  tg   ++++  v+  +   +                       ++ + +s++ +  +a+e++     ++ d Pff+yla+ ++H+p ++ de   +    + ++++ +               +++  +++v+++Dd++++++ +L+e+ ++dnT+++++SD+g       +n plrg+k  + +egg+rvP++v +  +  +          ++  v+  Dl +til  ag++ +++    ++ldg+s l  + +g++                                                             
  MMETSP1325-20131115|1994_1  57 PNVVTVMIDDLGWNDVGWHDPNFY-TPTMDALADSGVVLERFYTA-PTCTPSRSQFMTGRYNIRNGMQDSVLHSTepRGVPLTEQFLSTKLQSSGYRTVAIGKWHMGMHQSSYLPLSRGFDRHYGIYTGGGSHTGHFSVSQSFT--VrhqaeaqiwqgyniwedgvpsedNYGKTHSTHLYSAKAAEYVelfETEDdDTPFFMYLAYQAVHDPIEVGDEKYVS----QTTCGSITappgkkddtsgidwDNRQILCGMVAEIDDGVKNLVLKLKELDEWDNTFMLVFSDNGGVGVHgsKNLPLRGEKA-DYWEGGVRVPAFVSGGYTEGAlaaagvspYLNKDMVHITDLHTTILNVAGYQ-PSSSDAVKPLDGVSHLdQWIAGGSsadgveaartdllvninsalfggsgaihvgdyklivnpepsesriyaktrkalvakqgilD 493
                 9**************999888775.9*****************66.9**********************999999**********************************7776555******9997777666666554444443..24589*****************************************66666***************99776665444....44555554566778899***********************************************954447899*******9.*************998888888889888888888899**************3.3577888999999866146666666666666666666666666666666666666666666666666666666666666666662 PP

>> PF01663.17  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   1.2   0.00019       1.3       1      68 [.      59     126 ..      59     357 .. 0.48

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00019
                 EEEEEEE---GGGGG-....-SSHHHHHHHH---EES-EE--SS-SHHHHHHHHH----TTT----SSSE CS
  PF01663.17   1 vvvislDGlradllsrla..edtpglaaLakegvsapnlrpvfPtlTfpnhaslvTGlyPgsHGivgNtw 68 
                 vv + +D l ++++  +   + tp+++aLa+ gv+ +    ++Pt T p+ + ++TG+y  ++G+ +   
  MMETSP1325-20131115|1994_1  59 VVTVMIDDLGWNDVGWHDpnFYTPTMDALADSGVVLE-RFYTAPTCT-PSRSQFMTGRYNIRNGMQDSVL 126
                 5677888889999987778999**************9.444455555.89999***********988433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       570  (0.041691); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.13u 0.37s 00:00:01.50 Elapsed: 00:00:00.70
# Mc/sec: 2317.62
//
Query:       MMETSP1325-20131115|2000_1  [L=441]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-29  102.8   0.0    2.1e-29  102.3   0.0    1.2  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
    7.8e-20   71.0   0.1    2.4e-19   69.4   0.1    1.9  2  PF06337.7  DUSP domain
    3.8e-06   26.4   0.0    5.3e-06   25.9   0.0    1.2  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.011   14.8   0.0      0.023   13.8   0.0    1.4  1  PF00240.18 Ubiquitin family


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.3   0.0   6.1e-33   2.1e-29       2     111 ..     332     438 ..     331     441 .] 0.96

  Alignments for each domain:
  == domain 1    score: 102.3 bits;  conditional E-value: 6.1e-33
                 ----------THHHHHHHHHHHTSHHHHHHHHTTHCCH....H-TTHHTTTHHHHHHHHHHHHH--HHH-SSS---HHHHHHHHHHBGGGGGCTTS-HHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00443.24   2 gvtGleNlGntCYmnsvlQcLvsipelrdyllryeervaeineeneleeeaqlaraladlfkklvenssekkavsPsefkktlkkineqfsgykQqDahEfllflLdqlh 111
                 g++Gl NlGntC+mns+lQc +++++lr+ + +   ++++ ne+n+l+++++la a  +l++ +  +s + ++v+P+ fkk++++++++f+g++Q+D++E+l+flLd+lh
  MMETSP1325-20131115|2000_1 332 GLVGLANLGNTCFMNSILQCTSNVKPLRNLFVNGG-YKDDLNEDNPLGHNGKLAAAYGSLMEMM--YSGQGNKVAPRGFKKIIGEFKPDFAGFNQHDSQELLNFLLDGLH 438
                 789****************************9988.5559************************..9******************************************9 PP

>> PF06337.7  DUSP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   0.1   7.1e-23   2.4e-19       1      97 [.     118     200 ..     118     202 .. 0.91
   2 ?   -2.7   0.0       2.1   7.1e+03      40      68 ..     345     373 ..     310     375 .. 0.61

  Alignments for each domain:
  == domain 1    score: 69.4 bits;  conditional E-value: 7.1e-23
   PF06337.7   1 gqkwyliskkWleqwkdyvkydekeedsekssaqkpGpIdnssLveteeekakstllengrlkpqlqegkdyelvpeevweaLyewYgggpeiprkv 97 
                 gq +yl+s++W+++wk+y++   +          kpGpIdnssL+++             +l++ + e +dy ++  e+we L +wYgggp i+r++
  MMETSP1325-20131115|2000_1 118 GQHYYLVSSRWWREWKQYTTRGGQ----------KPGPIDNSSLLQESLDDT----VDTITLRRGVMERSDYYTLGPEAWEQLAKWYGGGPVIKRQA 200
                 799***************888865..........4**********9886443....6789***********************************97 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 2.1
   PF06337.7  40 dnssLveteeekakstllengrlkpqlqe 68 
                  ns L++t ++k   +l+ ng  k +l e
  MMETSP1325-20131115|2000_1 345 MNSILQCTSNVKPLRNLFVNGGYKDDLNE 373
                 47888888877766666777777766655 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   1.5e-09   5.3e-06       1      98 [.     334     439 ..     334     441 .] 0.93

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 1.5e-09
   PF13423.1   1 aGlennlnncYlnaLLqllfftldlfeailkhs..e.......cskencllceLgflfnmLdsstkgtpcqasnllralstipeaaalgeqqdvqeanrFileqlsl 98 
                 +Gl n +n+c++n++Lq    +++l+++ ++    +         ++ +l+++ g l +m+  s++g ++    + + +++++ ++a ++q d qe+  F+l+ l+ 
  MMETSP1325-20131115|2000_1 334 VGLANLGNTCFMNSILQCTSNVKPLRNLFVNGGykDdlnednpLGHNGKLAAAYGSLMEMMY-SGQGNKVAPRGFKKIIGEFKPDFAGFNQHDSQELLNFLLDGLHG 439
                 79***************************99887536777777568889*************.****************************************9985 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   6.7e-06     0.023       8      64 ..     228     290 ..     219     294 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 6.7e-06
                 EEEEECTTSBHHHHHHHHHHHHT..S-GGGEEEEE---B...E.TTTSBTTTTTT-TTEEEEE CS
  PF00240.18   8 itlevepsdtvselKekieekeg..ipvdqqrLiysGkv...L.eDdrtlseyniqdgstlhl 64 
                  ++   +  t++elK +++++ +   ++ +++  ysG++   L  +d+tl++ ni+++  ++l
  MMETSP1325-20131115|2000_1 228 LEVNCAKWATIKELKCALCWHFKldPDATRFWDYYSGRRyalLsNEDKTLQQVNITENQEMML 290
                 566677899**************66666778889***9655479*************998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.33s 00:00:01.10 Elapsed: 00:00:00.63
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|2002_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-35  119.5   0.2      7e-35  118.5   0.1    1.5  1  PF06071.8 Protein of unknown function (DUF933)


Domain annotation for each model (and alignments):
>> PF06071.8  Protein of unknown function (DUF933)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.5   0.1   5.1e-39     7e-35       2      84 .]     170     256 ..     169     256 .. 0.96

  Alignments for each domain:
  == domain 1    score: 118.5 bits;  conditional E-value: 5.1e-39
                 EEEEE----EEEEEEEE---BHHHH-----HHHHHT-----EE-HHHHHHHT....SHHHHHH-----------B-----EE----- CS
   PF06071.8   2 itfftaGekEvraWtikkgtkapqaagviHsDfekgFiraevisyedliklk....seakvkeagklrleGkeYvvqdgDiiefkfn 84 
                 i++ftaG++EvraWti kgt ap aagviH+Dfe+gFi+ae++++ed+++l     s+a +k+agk+r+eG++Yvv dgDi+ f+fn
  MMETSP1325-20131115|2002_1 170 INYFTAGDTEVRAWTIYKGTMAPAAAGVIHTDFERGFIKAETVAFEDFKALCggrpSMAGCKDAGKYRQEGRNYVVADGDIMLFQFN 256
                 79***********************************************985466799****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.60
# Mc/sec: 1050.40
//
Query:       MMETSP1325-20131115|2003_1  [L=371]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.6   1.6      0.041   14.1   1.1    1.8  1  PF04102.7 SlyX


Domain annotation for each model (and alignments):
>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.1     3e-06     0.041      29      66 ..     285     322 ..     284     325 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3e-06
   PF04102.7  29 eqqkeidrlqrqlrllaerlkeleessneaseaeeepP 66 
                 ++ +ei+rlq+ +r+l+e+l+ +e++s +   ++e  P
  MMETSP1325-20131115|2003_1 285 AHAREIARLQETIRQLREQLEGAEHTSDQHGTEAEHQP 322
                 689*********************88877555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.53
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|1997_1  [L=833]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.1e-199  663.4   0.0   5.6e-199  662.5   0.0    1.4  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  662.5   0.0  4.1e-203  5.6e-199       9     708 .]      92     830 ..      85     830 .. 0.91

  Alignments for each domain:
  == domain 1    score: 662.5 bits;  conditional E-value: 4.1e-203
  PF03028.10   9 kldwlteqewesiaalseleefkgleddleksekrwkkwldseapeeeklpkewkkrksalekLlllralrpDrlllavknfveeklgekfvesqeldlskiveessastpilfilspGvDplkkveklakklg.iee.kkltsvslGqgqgviAekaieeaakeGhWVlLqNiHLaaswlkeLekkleklsegshadFRlfLtaepapk.....lPiglLqnsikltnEpptGlkanllralssfkqevlemckkeaefkrllflLcffHAvvqERrkfgplGW.....nksYeFnegDlrisldvldnyleanapekvpwealryllgeimYGGritddfDrrllrtyleelfteelldeelelapkdesfkvPek..keyeeyleyieeLpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksreekvkqvlkdileklpklfdkeelkekltae..eekdplvvvlvqEiermnillkeirrslkelskglkGeltiteeleellkallkdkvPa.......sWakkaypslkgLaswlsdllkRikqlekwtedllkpktvwlsglfnpqsfltairQsvarknkwpLdklalqvevtkkekeetes..apeegvyveGlfleGarwdlke...............kllaesklkellsalpviwvkavea..........dkkeeksvyecPvYktkaRkeltlvltlklktkekkskwilagvalllq 708
                   +wl+e  w +++al+   efkg+ d ++++ ++wk+w+   +pe +k+p +++k + ++ kL+l+ra+rpDr+ +a++ +++++lg++fve++++d++ +++e++++tp++f+l pGvDp++ ve l+k+lg +ee  +++++s+Gqgq+  Ae+ ++  ak G W++LqN+HL+ sw+++Le+ le ++e++h+ FR +++ae  +      +P +lLq+ +k++nE+p+ +k+nl+ra+s+f+qe ++  +k++efk +lf Lc+fHAvv+ Rr fgp+GW      ++Y +n+gDl+++ dvl nyl+ n   +vpw++lry++geimYGG+itd fDrr+++tyl+ ++ +++++ +l+lap   ++k P+    + +++  yi++ ++ esP lyGLh+Naei+fl + +e+l+ t+l+l     e+  g g   +++v+ v++d++e+lp  f +  l+e +t +  e + p+vv+ +qE++rmn ll+e+rr+l +l+kglkG+l +t+ +e++++a ++++ P        +W+k a+ps+k L+  ++dll+R++ql +wt+d  +p ++w+sglfnp +flta++Q +ar  k +Ld+++ ++++t+  ++++ +   p +g+y++Glf+eGarw + e               + l++s lkell++lpv++vkav +             ++ s++ecPvY +++R++ t+v+ + +  k+  skw++ ++a+++q
  MMETSP1325-20131115|1997_1  92   830
                 5689**********************************************************************************************************************************7555789*****************************************************************887788999**********************************************************************54443358**********************..********************************************.9*****...88888762267789*******777777*****************************9665554..3333..35899***********77777777766665443999*******************************************************644444447****************************************************************************998887776668*****************875311122222222222246899*****************987444443222212467789*************.***********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (833 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.23u 0.43s 00:00:01.66 Elapsed: 00:00:00.68
# Mc/sec: 2935.54
//
Query:       MMETSP1325-20131115|2005_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       563  (0.0411791); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.62
# Mc/sec: 525.65
//
Query:       MMETSP1325-20131115|2006_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.45s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 733.58
//
Query:       MMETSP1325-20131115|2001_1  [L=578]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-25   87.2  26.0    7.4e-25   87.2  18.0    1.4  2  PF01061.19 ABC-2 type transporter
      6e-11   42.6   0.0    1.1e-10   41.7   0.0    1.4  1  PF00005.22 ABC transporter
      5e-07   28.9  22.7    8.8e-07   28.1  15.8    1.3  1  PF12698.2  ABC-2 family transporter protein
    0.00054   19.8   0.0     0.0011   18.9   0.0    1.5  1  PF13304.1  AAA domain
  ------ inclusion threshold ------
      0.073   12.8   0.1       0.29   10.9   0.0    2.0  1  PF13558.1  Putative exonuclease SbcCD, C subunit


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2  18.0   2.7e-28   7.4e-25      26     209 .]     322     506 ..     299     506 .. 0.92
   2 ?   -3.7   0.2       1.7   4.7e+03     107     122 ..     552     568 ..     545     573 .. 0.46

  Alignments for each domain:
  == domain 1    score: 87.2 bits;  conditional E-value: 2.7e-28
  PF01061.19  26 liqpllmalvfgtvfgnlgnssggl.qrpgllffsvlflafslltsiapiferergvlerelvsplyslsaivlakvlvelpvsllqaiifllivyflvgldlsfflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsmpkwlqwiyylnPltyavealrsnll 209
                 ++  l ++l+f++vf++++n ++ +   + +lf+s+++ ++++++ +++ ++ e+ v++re  +++y l+a + ++v + l+++ + +++f+   ++ vg++ +ff+fl ++ll+a++++++g++++ +++++  a+ ++   l+p+++++G+++++++++ +++ + y+++++ya+  l+ n++
  MMETSP1325-20131115|2001_1 322 VFLALCVGLMFTLVFYEVPNDQENYgLLQSCLFMSTMYSGMVTTSFMIIKVPLEKVVIVREYQNGYYALWAWYAGSVAAWLTLQAVTSTVFSSALWIAVGFQGNFFWFLAIVLLIAFIGTMFGYCLGLWCKNAVAAQSMLVPSLMPMIIFCGFLFNRNAVKDYFWEFWYISFFRYAFMPLIVNEF 506
                 6778999************766666578************99999999*********************************************999999*************************************************************66999999*********99999987 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 1.7
  PF01061.19 107 vsllqaiifll.ivyfl 122
                 ++ l  + fl+ ++y++
  MMETSP1325-20131115|2001_1 552 YISLGYLCFLIiTGYYF 568
                 33444444444233333 PP

>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0     4e-14   1.1e-10      37     118 .]      33     126 ..      13     126 .. 0.79

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 4e-14
                 EEEE-------.--BHHHHHH----S--.........-HHHHHHHHHH---HHHH--....----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  37 igyipqdpllfpeltvrenldmakeekk.........tdkrieevlekvgldelldk....srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                   +ipqd  l + lt r+ l +     +          +  ++++++ +gl++  ++       ++LSgGq++rv++A++l+++p +l LDEPt+
  MMETSP1325-20131115|2001_1  33 ANFIPQDDILIETLTPRQALEYIALL-RlsgdvpkeaVKMHLDQLIKSLGLTKCEHSpvgdPLSKGLSGGQRKRVSIAMELVNQPSVLFLDEPTS 126
                 56789999999888888888654443.258888888878888888889999884444566455679***************************96 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1  15.8   3.2e-10   8.8e-07     159     336 ..     345     563 ..     323     568 .. 0.73

  Alignments for each domain:
  == domain 1    score: 28.1 bits;  conditional E-value: 3.2e-10
   PF12698.2 159 asflag.lllfilifigaliialsiv...eEkesrikelqlvsgvspfaywlskilgdllv..gliqlllilllafglegipfg.nlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfpleslpsflkwifsiiPffslgdgllrii...tgdlse......................................illsliiLllfav 336
                 ++ l+   l++  ++ g++ ++++i+    Ek   ++e q   g  ++  w +  ++ +l   +++++++  +l+++   ++f  n++++l + ll +++ +++gy+l++++k++ +aq+++++ ++++++f+++lf  ++  + + w f++i ff ++ ++l ++   +g+ +e                                      +++sl++L+ +++
  MMETSP1325-20131115|2001_1 345 NYGLLQsCLFMSTMYSGMVTTSFMIIkvpLEKVVIVREYQN--GYYALWAWYAGSVAAWLTlqAVTSTVFSSALWIA---VGFQgNFFWFLAIVLLIAFIGTMFGYCLGLWCKNAVAAQSMLVPSLMPMIIFCGFLFNRNAVKD-YFWEFWYISFFRYAFMPLIVNefkQGT-FEdcdmakgelcplgqgevsrsivyssqvldipesvlpdyLYISLGYLCFLII 563
                 34444445556666666666666554333566666677764..4444444444444444433477888888899999...88888******************************************99999999998887776.446699999999999998888865444.55677778888888888888889999999999999666654466666665554 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   3.9e-07    0.0011     237     289 ..      98     148 ..      52     158 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 3.9e-07
   PF13304.1 237 lSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsn.gg 289
                 lS G+++  ++++ l + +   svl++DEp +gL+      +ie ++el+  +g
  MMETSP1325-20131115|2001_1  98 LSGGQRKRVSIAMELVNQP---SVLFLDEPTSGLDSQTAFSVIESINELTSsNG 148
                 69***************99...************************99998444 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011      0.29      62      88 ..     114     140 ..      92     142 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00011
   PF13558.1  62 psirlvfLDEAFsklDeeniasllell 88 
                 ++++ +fLDE++s+lD++++ s++e +
  MMETSP1325-20131115|2001_1 114 NQPSVLFLDEPTSGLDSQTAFSVIESI 140
                 56899**************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       611  (0.0446899); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.92u 0.47s 00:00:01.39 Elapsed: 00:00:00.84
# Mc/sec: 1648.92
//
Query:       MMETSP1325-20131115|2007_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 916.87
//
Query:       MMETSP1325-20131115|2008_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.29s 00:00:00.65 Elapsed: 00:00:00.66
# Mc/sec: 406.65
//
Query:       MMETSP1325-20131115|2011_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       628  (0.0459333); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 483.97
//
Query:       MMETSP1325-20131115|2009_1  [L=421]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-15   57.1   0.0    3.5e-15   56.2   0.0    1.5  1  PF01145.20 SPFH domain / Band 7 family
    8.5e-10   37.6   0.0    2.7e-09   36.0   0.0    2.0  1  PF00240.18 Ubiquitin family
     0.0012   18.4   0.0      0.004   16.6   0.0    2.0  2  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
       0.35   10.8   4.5       0.94    9.4   3.1    1.8  1  PF05103.8  DivIVA protein


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.2   0.0     1e-18   3.5e-15      21     173 ..     143     291 ..     116     333 .. 0.87

  Alignments for each domain:
  == domain 1    score: 56.2 bits;  conditional E-value: 1e-18
  PF01145.20  21 lepGlhfklPfgekvtvvstrvqtldvsdesvtvptkDglnvtvdvtvry..rvsdakkliaavaqeeenlenllrrllesalrevlsqmtldeilsnrselaaelknelneqlqkygievvdvritdvdpppevkqalakkqaaeaeaaeaeia 173
                 l++G h+ l  g+k+++++ +  +++     ++++t Dgl+ +++ t++y  +v++ k l++++  ++++ +  l+++ +s lr+v++++t+ e++s+r e+a+++   ++++l++  +++ d+ + ++  p+++++a+ + + a+++  e++++
  MMETSP1325-20131115|2009_1 143 LKQGRHY-LGVGHKLKRFPRKRVVYEPAY--MSARTYDGLSCDIQTTMQYslQVENLKPLYRTF--GSRYQDMALKPIMRSVLRDVIAKYTAFELVSKRHEVADDMFVTCRDALDDVWLTLHDLELISIAWPQTIIDAITATAVAVQDV-ETAKS 291
                 4556555.566666666666666666666..*******************7777**********..*********************************************************************************99.55443 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0     8e-13   2.7e-09       2      68 ..      17      88 ..      16      89 .. 0.89

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 8e-13
                ESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE--....-BE.TTTSBTTTTTT-TTEEEEEEESS CS
  PF00240.18  2 tlsgktitlevepsdtvselKekieekegipvdqqrLiysG....kvL.eDdrtlseyniqdgstlhlvlrl 68
                t+++k   l+v++++++++lK++i+  eg++++qq L + G    ++L ++ rt++  ++q+gs ++l  rl
  MMETSP1325-20131115|2009_1 17 TITSKRLALSVDSTESIATLKQRIQRTEGLRPHQQNLYHVGadgrRQLlQNRRTVGASGLQEGSLIELQPRL 88
                67888999*******************************8866666677****************9997665 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.2e-06     0.004       3      70 ..      13      84 ..      11      85 .. 0.89
   2 ?   -2.6   0.0       1.2   4.2e+03      29      44 ..     348     363 ..     343     364 .. 0.83

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.2e-06
                EEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE-...---B..--TTSBGGGSS--TTEEEEE CS
   PF11976.3  3 ivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiF...DGer..Ldpndtvedldiedgdtidv 70
                +v+ + + k++ ++V++++ +++L+++ ++ +g+ +  q++L+    DG+r  L++ +tv+  ++++g++i++
  MMETSP1325-20131115|2009_1 13 VVVETITSKRLALSVDSTESIATLKQRIQRTEGLRP-HQQNLYHvgaDGRRqlLQNRRTVGASGLQEGSLIEL 84
                67888899****************************.99***994445554669999**************96 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.2
                 HHHHHHT----TT-EE CS
   PF11976.3  29 ayrkkkgipeeeqvrL 44 
                  y++k+g +e+e++ L
  MMETSP1325-20131115|2009_1 348 SYATKEGMKEKETIAL 363
                 6999999999998877 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.1   0.00027      0.94      46     117 ..     281     352 ..     269     385 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00027
   PF05103.8  46 eeieeleekleeykeleeslkkslvvaqetaeevkanakkeaeliikeaekkaekiveeaeeeakkleteld 117
                   +++ e+  +ey+    s + ++++a   a+e+  +a+ +a +++++a++++++i+ eae++ + ++  ++
  MMETSP1325-20131115|2009_1 281 VAVQDVETAKSEYNIAVISAETKVIAARTLADELIYQANATAMQTLASAKAEESAILYEAEAQKNWMSYATK 352
                 56677777778888888888999**********************************999998877776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       729  (0.0533207); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.40s 00:00:01.20 Elapsed: 00:00:00.61
# Mc/sec: 1653.88
//
Query:       MMETSP1325-20131115|2004_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-22   78.9   0.6    5.3e-22   77.8   0.4    1.5  1  PF02482.14 Sigma 54 modulation protein / S30EA ribosomal protein


Domain annotation for each model (and alignments):
>> PF02482.14  Sigma 54 modulation protein / S30EA ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.4   3.9e-26   5.3e-22       6      92 ..      35     127 ..      33     129 .. 0.96

  Alignments for each domain:
  == domain 1    score: 77.8 bits;  conditional E-value: 3.9e-26
  PF02482.14   6 grnvevtdalreyveeklek.lekyfdriisadvtlsk.....ekkefkveitillkggtlraeeesedlyaAidlavdkLerqlrkykeklk 92 
                 g+nvevt+a++eyv +k+   le++ + ++++dv+ls+      k ++ +e+t+ +kg ++r +e+se++ya+id+++d L r+lrk+kek+k
  MMETSP1325-20131115|2004_1  35 GNNVEVTPAMNEYVDKKVGVvLERHSNIVTKCDVHLSVihnprVKLSHCAEVTVSVKGLVMRTSERSENMYASIDMVADGLARKLRKFKEKKK 127
                 89************************98899***********97789********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      382  (0.0279403); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.40s 00:00:00.92 Elapsed: 00:00:00.53
# Mc/sec: 1017.32
//
Query:       MMETSP1325-20131115|2012_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-14   54.1   0.0    1.6e-14   53.6   0.0    1.1  1  PF00117.23 Glutamine amidotransferase class-I
    3.2e-05   23.3   0.0    5.9e-05   22.4   0.0    1.4  1  PF07722.8  Peptidase C26
  ------ inclusion threshold ------
       0.17   11.6   1.2       0.42   10.3   0.8    1.7  1  PF00357.15 Integrin alpha cytoplasmic region


Domain annotation for each model (and alignments):
>> PF00117.23  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   3.6e-18   1.6e-14      58     179 ..      12     134 ..       5     142 .. 0.82

  Alignments for each domain:
  == domain 1    score: 53.6 bits;  conditional E-value: 3.6e-18
                 -CCHHHHHHHHGTTTS-EE------HHHHHH-TTEEE..TTC.CSEEEEEEEEEETTT.SCCCTTTTSEEEEEE-ESEEECSGHHHHTTEEEEEEESSS-EEEEEEECSS.S.BEEESSBTTCTTS- CS
  PF00117.23  58 vegkieaikearenkiPiLGICLGmQllaiefggkvi..kekkeehmggnmrlghdgk.aallyglpnevivrhrHsyevnekellpeglevtaksedggeimaivekkn.p.ivgvQFHPEssstp 179
                 v+ ++e+  + +e ++  +G C G+Q++a + ggkv   ++++e   g +  l ++g+ +++++g+++ ++v  +Hs+ev+e   lpeg +++a +++++ + a+  ++n    + vQ+HPE+ ++ 
  MMETSP1325-20131115|2012_1  12 VHRQVELMARTFETGVSSFGSCWGLQIAAVACGGKVElnPKGREVGVGRKVLLSSEGRdHPMFSGKKSAFEVFESHSDEVTE---LPEGGVLLAGNDHTS-VQAMAVDRNgTsSWFVQYHPEYDLKY 134
                 56677888889999***********************9866668888888888887779**********************9...9*9988888888875.444444444344666*******9875 PP

>> PF07722.8  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.3e-08   5.9e-05      96     217 .]      16     129 ..       4     129 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 1.3e-08
                 HHHHHHH------BB------HHHHHHH------EEE.............EEEEEEE--ET-STTTTS-.H.HHS--EEEEEEEE-BHHHHH-EEEEEEE----EEEEEEE--S-B----S-TT CS
   PF07722.8  96 laLiraalergvPvlgiCrGlqllnvalggtlyqdikeepglsdhreheqdasshavslekgsllarll.g.aeeievnslHhqaikelakglevlAtaedgvieaieseeakyfvlgvQWHPE 217
                 + L+ ++ e gv  +g C Glq+  va gg++  + k           ++     +v l +++    ++ g ++ +ev + H   ++el +g   lA ++   + a+ + ++ +  + vQ+HPE
  MMETSP1325-20131115|2012_1  16 VELMARTFETGVSSFGSCWGLQIAAVACGGKVELNPKG----------REVGVGRKVLLSSEGRDHPMFsGkKSAFEVFESHSDEVTELPEGGVLLAGNDHTSVQAMAVDRNGTSSWFVQYHPE 129
                 6799999************************9998884..........346778888888777777777345788************************************99**********9 PP

>> PF00357.15  Integrin alpha cytoplasmic region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.8   9.3e-05      0.42       1       7 [.     148     154 ..     148     155 .. 0.95

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 9.3e-05
                 C---CCC CS
  PF00357.15   1 KcGFFKR 7  
                 K+GFFKR
  MMETSP1325-20131115|2012_1 148 KMGFFKR 154
                 9****** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.96
# Mc/sec: 611.57
//
Query:       MMETSP1325-20131115|2014_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.53   10.4  11.4       0.19   11.9   0.8    2.9  3  PF04968.7 CHORD


Domain annotation for each model (and alignments):
>> PF04968.7  CHORD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.8   1.4e-05      0.19       9      30 ..      84     105 ..      78     110 .. 0.90
   2 ?    2.1   2.3     0.016   2.2e+02      36      47 ..     125     137 ..     117     151 .. 0.71
   3 ?   -0.5   0.0       0.1   1.4e+03       7      17 ..     142     152 ..     136     159 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.4e-05
                 ----EE-STT--TT---BB--- CS
   PF04968.7   9 gCgktyeeeeneeeaCvyHpga 30 
                  Cg  y e +n++ +C+yHpg+
  MMETSP1325-20131115|2014_1  84 LCGIFYLEGHNTDRSCRYHPGE 105
                 4999****************95 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.016
                 TBB--TTTT--.B CS
   PF04968.7  36 gskgwsCCkkk.v 47 
                  ++ w+CC+ +  
  MMETSP1325-20131115|2014_1 125 RTRRWTCCDVReK 137
                 6799****98733 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.1
                 -B----EE-ST CS
   PF04968.7   7 nkgCgktyeee 17 
                 n+gC+++++  
  MMETSP1325-20131115|2014_1 142 NTGCQSRFHMP 152
                 899*9999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       767  (0.0561001); expected 273.4 (0.02)
Passed bias filter:                      456  (0.0333528); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1247.08
//
Query:       MMETSP1325-20131115|2015_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1579  (0.115492); expected 273.4 (0.02)
Passed bias filter:                      688  (0.0503218); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 830.17
//
Query:       MMETSP1325-20131115|2017_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-42  144.6   0.0    1.7e-42  144.4   0.0    1.1  1  PF00071.17 Ras family
      3e-18   66.3   0.0    4.6e-18   65.7   0.0    1.3  1  PF08477.8  Miro-like protein
    1.3e-11   43.9   0.0    1.6e-11   43.6   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    9.1e-06   24.8   0.0    1.5e-05   24.2   0.0    1.3  1  PF04670.7  Gtr1/RagA G protein conserved region
    0.00074   19.3   0.0     0.0011   18.7   0.0    1.3  1  PF01926.18 50S ribosome-binding GTPase
  ------ inclusion threshold ------
       0.01   14.2   0.1        1.1    7.5   0.0    2.4  2  PF05783.6  Dynein light intermediate chain (DLIC)
       0.03   14.5   0.0      0.046   13.9   0.0    1.4  1  PF13191.1  AAA ATPase domain
      0.058   12.4   0.0      0.094   11.8   0.0    1.4  1  PF09439.5  Signal recognition particle receptor beta subunit
      0.075   13.0   0.2       0.29   11.1   0.0    1.9  2  PF09725.4  Folate-sensitive fragile site protein Fra10Ac1
      0.085   12.4   0.1       0.25   10.9   0.0    1.9  2  PF13245.1  Part of AAA domain
       0.14   12.2   0.0       0.98    9.5   0.0    2.0  2  PF00004.24 ATPase family associated with various cellular activities (AAA)


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.4   0.0   1.4e-45   1.7e-42       1     160 [.      13     176 ..      13     178 .. 0.97

  Alignments for each domain:
  == domain 1    score: 144.4 bits;  conditional E-value: 1.4e-45
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST....TTSSEEEE---TTGGGG-SS-HHHHHHHHHHTT.EEE---BTTTTTTHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae....envpivLvGnKvDleekravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 K++++Gd a+GKts++ r+v++ F++++ +T+gvdf  k++ v +++v+l++wD AGq++f ++++ yy+da g++lvyd+++ ++fe+v+kw +ei +++     + +p+vL++nK+D+e   +++++e  +++ke+g ++++etSAkt+++++ a   l++++
  MMETSP1325-20131115|2017_1  13 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLVVGQNTVRLQLWDIAGQDRFGAIARVYYKDAYGAFLVYDLSRPRTFETVAKWKKEIDSKVLlpngKPLPVVLLANKCDIEG-VEIDADELDRFCKEHGfITWFETSAKTDHKIDAAARYLVENV 176
                 89************************************************************************************************9998889999*************7.99******************************9999888877 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.7   0.0   3.7e-21   4.6e-18       1     119 []      13     131 ..      13     131 .. 0.89

  Alignments for each domain:
  == domain 1    score: 65.7 bits;  conditional E-value: 3.7e-21
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelr..klgkkipvilvgnklD 119
                 kv+v+Gd+ +GK+s+++++v   f+  +  + + g + a k l+v  +t  l+lwd++g++++ +      k+a ++ lvydl++++++e+v + ++++++      gk +pv+l++nk+D
  MMETSP1325-20131115|2017_1  13 KVLVLGDPATGKTSIIKRYVHNFFS--NHHRTTVGVDFALKQLVVGQNTVRLQLWDIAGQDRFGAIARVYYKDAYGAFLVYDLSRPRTFETVAKWKKEIDSKVllPNGKPLPVVLLANKCD 131
                 89******************99999..777778888888889999999999**************77777*****************************99762144555**********9 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.0   1.3e-14   1.6e-11      14     144 ..      11     150 ..       4     176 .. 0.76

  Alignments for each domain:
  == domain 1    score: 43.6 bits;  conditional E-value: 1.3e-14
                 EEEEEEE--TT---HHHHHHHHHS-EEEE-S-.-S..-EEEEEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHH...HHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT.---HHHHHHHTTTTT CS
  PF00025.16  14 elrilllGLDnaGKtTilkklkleelvttvPT.ig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRle...eakeeLkalleeeelkevallvlaNKqDlpe.alseeelrellglee 144
                  +++l+lG  ++GKt i+k++ ++ ++++  T +g  f  ++l +  +++++++wD+ Gq++   + + Y+++  +   v D +  + +e   + k+e+++ +   + k  ++++laNK D+++  ++++el +  + + 
  MMETSP1325-20131115|2017_1  11 TFKVLVLGDPATGKTSIIKRYVHNFFSNHHRTtVGvdFALKQLVVgqNTVRLQLWDIAGQDRFGAIARVYYKDAYGAFLVYDLSRPRTFEtvaKWKKEIDSKVLLPNGKPLPVVLLANKCDIEGvEIDADELDRFCKEHG 150
                 689*********************99985543244227888887755889***************************9999*9987766511156788888788888899************983467777776666655 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.2e-08   1.5e-05       1      62 [.      13      74 ..      13      86 .. 0.80

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 1.2e-08
   PF04670.7  1 klLLmGksgsGKtSmrsiiFsnylard.tlrLgaTidveqshvrflgnlklnlwDcgGqeefv 62
                k+L++G    GKtS+ +   +n+  ++  +++g+   ++q  v   + + l+lwD+ Gq++f 
  MMETSP1325-20131115|2017_1 13 KVLVLGDPATGKTSIIKRYVHNFFSNHhRTTVGVDFALKQLVV-GQNTVRLQLWDIAGQDRFG 74
                89**************999999876660455666666666666.47789***********985 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   9.1e-07    0.0011       1     104 [.      13     117 ..      13     129 .. 0.60

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 9.1e-07
                 EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSE.SE.EEE...ETTE.EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTSHHHH.HHHHHHHHH..H....T CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrdi.te.nev...kkek.iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasavlke.adkellnel..e....a 104
                 +v ++G p +GK+++i++ ++      s+++ tT  +    +++   +++  ++l+D++G       d+    +  + +   ++a +++lv d+s++ +  ++ +  +e+  +    +
  MMETSP1325-20131115|2017_1  13 KVLVLGDPATGKTSIIKRYVH---NFFSNHHRTTVGVdFAlKQLvvgQNTVrLQLWDIAGQ------DR----FGAIARVYyKDAYGAFLVYDLSRPRTFeTVAKWKKEIdsKvllpN 117
                 589*****************5...478999999999954453334433332468******2......33....222334445888889999997774421133333333333033343 PP

>> PF05783.6  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0   0.00085       1.1      47     148 ..      13     110 ..       9     117 .. 0.63
   2 ?    4.3   0.0    0.0083        10     249     283 ..     142     177 ..     121     186 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00085
   PF05783.6  47 svlvlGedgsGkttliaklqG...veenkkGrGleylyldvkdedrddltrlnvwildGdlyhkgllkfaleaeslkdtl.vilvvdlsrPWtileslqkWasvlr 148
                 +vlvlG+ ++Gkt++i +       ++++   G++++  ++      ++ rl+ w + G          a+    +kd+  + lv dlsrP t +e + kW + ++
  MMETSP1325-20131115|2017_1  13 KVLVLGDPATGKTSIIKRYVHnffSNHHRTTVGVDFALKQLVV--GQNTVRLQLWDIAGQDRFG-----AIARVYYKDAYgAFLVYDLSRPRT-FETVAKWKKEID 110
                 69**************886431224566666777776555443..3456677777776665443.....444445555542556777777765.577777776655 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0083
   PF05783.6 249 irrfclqyGa.allytsvkeeknldllykylvhkiy 283
                 + rfc + G  + + ts k +  +d   +ylv+ + 
  MMETSP1325-20131115|2017_1 142 LDRFCKEHGFiTWFETSAKTDHKIDAAARYLVENVL 177
                 679*****9627788*****************9875 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.7e-05     0.046      26      66 ..      14      62 ..       3     115 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.7e-05
   PF13191.1 26 llvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn........l 66
                +lv+G++ +GK+s++++  ++ + ++ r + g+ + l++         l
  MMETSP1325-20131115|2017_1 14 VLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLvvgqntvrL 62
                89***************88777777766666665555444555555444 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   7.6e-05     0.094       5      64 ..      13      75 ..       9     134 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 7.6e-05
                EEEEE--TT---HHHHHHHHHS...S-------SS-EEETT-...-----EEEE----GGGGH CS
   PF09439.5  5 avllvGlsdsGKTslftrLttd...svkktvtSqessaalkvksekgkkltliDfPGheklrq 64
                +vl++G   +GKTs+++r   +   + ++t + ++  + + v +++  +l+l D+ G++++  
  MMETSP1325-20131115|2017_1 13 KVLVLGDPATGKTSIIKRYVHNffsNHHRTTVGVDFALKQLVVGQNTVRLQLWDIAGQDRFGA 75
                699*****************998777777888887777777789999************9864 PP

>> PF09725.4  Folate-sensitive fragile site protein Fra10Ac1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       3.1   3.9e+03      36      61 ..      26      51 ..      23      59 .. 0.66
   2 ?   11.1   0.0   0.00023      0.29      28      61 ..      75     108 ..      66     135 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 3.1
   PF09725.4 36 klfkeyaiidlskykeaklglrWrte 61
                +++k+y+    s+++++ +g+ +  +
  MMETSP1325-20131115|2017_1 26 SIIKRYVHNFFSNHHRTTVGVDFALK 51
                56777777777777777777666555 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00023
   PF09725.4  28 rlarkyyeklfkeyaiidlskykeaklglrWrte 61 
                  +ar yy+  +  + + dls+ ++ ++  +W+ e
  MMETSP1325-20131115|2017_1  75 AIARVYYKDAYGAFLVYDLSRPRTFETVAKWKKE 108
                 589****************************976 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0    0.0002      0.25      12      33 ..       9      33 ..       1      59 [. 0.72
   2 ?   -2.4   0.0       2.9   3.6e+03      53      62 ..     167     176 ..     161     193 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.0002
   PF13245.1 12 l....lvvtGgPGtGKTttlaaiiaa 33
                +    ++v G P tGKT  ++++ ++
  MMETSP1325-20131115|2017_1  9 VntfkVLVLGDPATGKT-SIIKRYVH 33
                44445677*********.55555444 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 2.9
   PF13245.1  53 raakrlserl 62 
                 +aa++l e +
  MMETSP1325-20131115|2017_1 167 AAARYLVENV 176
                 5666665554 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00078      0.98       1      22 [.      14      35 ..      14      73 .. 0.79
   2 ?    0.7   0.0      0.41   5.1e+02      10      38 ..     118     153 ..     117     199 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00078
                EEEE-------HHHHHHHHHHC CS
  PF00004.24  1 vllyGppGtGKTllakavakel 22
                vl+ G p tGKT+++k  ++++
  MMETSP1325-20131115|2017_1 14 VLVLGDPATGKTSIIKRYVHNF 35
                799************9877764 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.41
                 --HHHHHHHHHHCTHEEEEEECCSSSSS........T CS
  PF00004.24  10 GKTllakavakelgvefleisgsellsk........y 38 
                 GK l +  +a+++++e +ei++ el           +
  MMETSP1325-20131115|2017_1 118 GKPLPVVLLANKCDIEGVEIDADELD-RfckehgfiT 153
                 66666777888888888888887776.3234445442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 1068.38
//
Query:       MMETSP1325-20131115|2016_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.6    9.9   3.2         14    5.5   2.2    2.4  1  PF11693.3 Protein of unknown function (DUF2990)


Domain annotation for each model (and alignments):
>> PF11693.3  Protein of unknown function (DUF2990)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   2.2     0.001        14       4      64 .]      98     164 ..      95     164 .. 0.57

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.001
   PF11693.3   4 ltAtslAAPtlfdniYdySddlaeflgrVs.kyiesakdllkat....atCDtSk.iaLPafASgLP 64 
                 l+A +    t+f +    S+d++ fl  Vs + +e     +++      t D  +  +LPafAS+LP
  MMETSP1325-20131115|2016_1  98 LAAAANGSKTFFADEVGGSSDMSIFLLGVSiECMERIGPGFASRvgrfFTTDGRRpPSLPAFASALP 164
                 6667777777777777777777777777762223322222222211114556554258999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 841.17
//
Query:       MMETSP1325-20131115|2019_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       409  (0.0299152); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 930.89
//
Query:       MMETSP1325-20131115|2021_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-79  266.8   0.0    1.2e-79  266.7   0.0    1.0  1  PF00121.13 Triosephosphate isomerase


Domain annotation for each model (and alignments):
>> PF00121.13  Triosephosphate isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  266.7   0.0   8.8e-84   1.2e-79       2     244 .]       2     242 ..       1     242 [. 0.98

  Alignments for each domain:
  == domain 1    score: 266.7 bits;  conditional E-value: 8.8e-84
                 EEEEEETT-S-HHHHHHHHHHHHCCCHHTTTEEEEEEE-GGGHHHHHHHC.STTSEEEES--BSS--.---TTHHBHHHHHHTT--EEEESEHHHHHHS.-BHHHHHHHHHHHHHTT-EEEEEESCEHHHHHTTHHHHHHHHHHHHHHHTSSTGGGGGEEEEEEEGGG------HHHHHHHHHHHHHHHHHHHHTHHHHHCCSEEE------TTTHHHHHTSTT----EE-HGTTSCHHHHHHH CS
  PF00121.13   2 iiigNwKmnktleeakellkkllaaklkeekvevvvappflyLesvkkalkeskikvgaQnvsaeds.GafTGevsaemlkdlgvkyviiGHSErrqyfgetdeevakkvkaalkagltpvlCvgEtleereagktkevlkeqlkailekldeealknliiAYePvwAIGtgkvatpeeaqevhaairkelaekfskevaeevrilyGGsvnaenakellkqkdvdGlLvGgaslkaesflaii 244
                 +i+gNwK+n+t e++++l+  l +a++++  +evvvap +l++  v   l +s ++v aQn+ a+++ GafTGe+ a++l d+g+++ i GHSErr++fgetde va k+k a++agl ++ CvgE+l++r+ g+  +v+++ql+a  ++l+ee+++++ iAYePvwAIGtg+vatpe+aqevha+ir +l++++s +va ++ri+yGGsv+ +na +l+++ dvdG+LvGg+slk e+fl+ii
  MMETSP1325-20131115|2021_1   2 LIGGNWKCNGTMESTEALVGILNTADIPD-FCEVVVAPIALHIPYVVANL-TSGVTVSAQNCGANAKmGAFTGEICASQLVDFGLTWCITGHSERREMFGETDELVATKTKIAVDAGLSVMACVGEKLDARKDGSLWDVITAQLAALGAQLSEEDWAKVAIAYEPVWAIGTGEVATPEQAQEVHAFIRGWLSTNVSPAVAAATRIQYGGSVKGSNAGTLAACADVDGFLVGGSSLK-EDFLNII 242
                 799******************99999998.******************99.59*********999977************************************************************************************************************************************************************************.88**997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.67
# Mc/sec: 890.59
//
Query:       MMETSP1325-20131115|2023_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.037   13.5   0.4       0.06   12.8   0.3    1.3  1  PF01024.14 Colicin pore forming domain
       0.12   12.3   0.0       0.21   11.5   0.0    1.4  1  PF01187.13 Macrophage migration inhibitory factor (MIF)


Domain annotation for each model (and alignments):
>> PF01024.14  Colicin pore forming domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   8.7e-06      0.06      18      88 ..      82     154 ..      62     157 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 8.7e-06
                 HHHH-----------HHHHHHHHHHHHHH------HHHHHHHHHHH..TT-TT----HHHHHHHHHHHHH--T CS
  PF01024.14  18 liadfykkvteklgekykklakelAekikGkkirsvdeAlasleKl..kanlnkKinkaDrdaivnalksvna 88 
                  + df + v  k  + +k+ a++lA++     +r  de l   + +  + + + K++kaD++ i + + +++a
  MMETSP1325-20131115|2023_1  82 ATQDFTRLVESKCTAGVKSAAQDLANSNERSAVRYLDELLGYAQFIpqTFDHDAKVSKADKEKILATYTAAKA 154
                 6889999*******************************9865554411567899***********99988776 PP

>> PF01187.13  Macrophage migration inhibitory factor (MIF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     3e-05      0.21      19     102 ..      10      90 ..       2     102 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3e-05
  PF01187.13  19 ekrltaalakalgkPedrvavevapgqalvfggstdPcavlslksiGvvgaeqnrshskkllellakeLklskdrvlieffdle 102
                   +lta lak++   +d + ++v+ + +l ++  +d   + + + +G+++ ++     k+l+e   +   +++dr   +f+ l 
  MMETSP1325-20131115|2023_1  10 AGKLTAELAKSVRDRADSMGIDVREDLKLEMSLKSD---LFLAEVVGAIAKKEVTVENKELIEDFQEAWGIDNDRATQDFTRLV 90 
                 679*****************************9988...5677889***999999999*****************999998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 1219.48
//
Query:       MMETSP1325-20131115|2022_1  [L=757]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-24   85.3   0.0    4.9e-24   84.9   0.0    1.1  1  PF04179.7 Initiator tRNA phosphoribosyl transferase


Domain annotation for each model (and alignments):
>> PF04179.7  Initiator tRNA phosphoribosyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.9   0.0   3.6e-28   4.9e-24     199     449 ..      20     291 ..      15     293 .. 0.76

  Alignments for each domain:
  == domain 1    score: 84.9 bits;  conditional E-value: 3.6e-28
   PF04179.7 199 eftpvvlvtaSkrveggedse.sgftYvqGAgDDeEeWaegLtpevFWknkeellek.seeeleelieelveeekkssaeseaervkvkavkndk.........nttelalgkiek.nlaae.kslvakeekevdlviklsekvvsseteekkkkvlelklesskkgske.L..rkaLpkieefiksklss...eknkkilvlcesGkdlsvgvvlailckyfdedgklkk.skeekkinkelirkrlaliieskk.kvnpsratlqsvnsf 449
                 +ftpv++++aS   + +e+++ +++tY+qGAgDDeE+Wa+gLtp +FW+n +ell+  +e +l+++i elv++ +   ae  a++ + +a+++d           +t+l  ++++  +++      +    + ++++++++++++s +++  k ++l++++ ++k ++ + +   + Lp++ +f  ++l+s   e+    l+++ +    ++ v+ a+l   fd+d +      + +  +ke +r rl+++   ++ ++ p r+ +++ n f
  MMETSP1325-20131115|2022_1  20 AFTPVICISASVVQSAAEHRQhHSWTYIQGAGDDEENWANGLTPGLFWSNCDELLALeDESSLQRRIGELVATAQGAAAEGAAAERAAAAEQSDPvatlgpriiAKTRLCYASTTWvETRCRtPGPSGVCRRPFSFLLHCDPEPLSWAPALAKGTYLHVPVAAGKRANSTgFweTRVLPDAIRFAYRALASpadETGPAALLVASHDSATATLVLCALLFALFDDDLASLVpGVRIEAASKESLRSRLVALQPFLPeEAWPPRHLMKALNRF 291
                 79*********776666655559*******************************98626678**********9999888888874444455555578999999966666665554424444435566777899******************************99876542422467999999999999987753344444444444466777777899999999987655478888999999**999999877764667777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (757 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.06u 0.36s 00:00:01.42 Elapsed: 00:00:00.61
# Mc/sec: 2973.84
//
Query:       MMETSP1325-20131115|2025_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       936  (0.0684611); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1313.00
//
Query:       MMETSP1325-20131115|2026_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-25   88.0   0.1    6.4e-25   87.4   0.1    1.2  1  PF10075.4  COP9 signalosome, subunit CSN8
    1.9e-20   73.1   2.3    3.2e-20   72.3   1.6    1.3  1  PF03399.11 SAC3/GANP/Nin1/mts3/eIF-3 p25 family


Domain annotation for each model (and alignments):
>> PF10075.4  COP9 signalosome, subunit CSN8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.4   0.1   9.3e-29   6.4e-25       2     133 ..     100     232 ..      99     240 .. 0.93

  Alignments for each domain:
  == domain 1    score: 87.4 bits;  conditional E-value: 9.3e-29
   PF10075.4   2 lkaelytliLlkaLtqndiadfrlllkrlpaaikesdeeiqkllsLeqlLeendyakfwqtlksndlsedltafvagleelvRkeiaelvgkaYesIsadvlaelLgls.deelekfvver..gWeldsdgvlvp 133
                 l++++ +l+L+++L++n++a+f+++l++l ++   + e+i ++++Leq+L+ ++y+++ + +k   ++e+ + f+a l+e+vR++iae+ + aY+++s   ++++  l  ++el++f++e   +W +d+++  + 
  MMETSP1325-20131115|2026_1 100 LEPTICGLNLMLLLVENRLAEFHSELELLSEEERAN-EAIAFPIRLEQYLMVGSYNQVLE-AKASMPNESFEFFMALLLETVRDFIAECTEVAYTELSMTAAQKMMMLGsRDELTSFIEEAheNWVVDGETLRFN 232
                 5678999************************98885.***********************.88889*******************************************9********98769*****9998554 PP

>> PF03399.11  SAC3/GANP/Nin1/mts3/eIF-3 p25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   1.6   4.7e-24   3.2e-20      59     203 ..      64     204 ..      52     205 .. 0.92

  Alignments for each domain:
  == domain 1    score: 72.3 bits;  conditional E-value: 4.7e-24
  PF03399.11  59 letiarialesgdleqfnqclaqLkelYadlregepsdneaefvayiLLyalvadpspdfnlelellpaelrtdpliqhalqleaaleegnyarffklleskdvpylmaclleifenaiRkealkaiskayrssiplkflaelLg 203
                  e+ +++++  +d ++f++ +aqLk++Ya+     ps  e  + +++L+++lv+++ ++f++elell++e r +++i ++++le++l+ g+y++++     + +++ ++ ++  +++++R+ ++++ + ay++ +++  ++++++
  MMETSP1325-20131115|2026_1  64 FEQAVLLSVGLEDTQSFQRHFAQLKPFYAEA--STPSALEPTICGLNLMLLLVENRLAEFHSELELLSEEERANEAIAFPIRLEQYLMVGSYNQVLEAK-ASMPNESFEFFMALLLETVRDFIAECTEVAYTE-LSMTAAQKMMM 204
                 68888889999*******************5..3799******************************999***************************55.689999**************************9.***99999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1260.48
//
Query:       MMETSP1325-20131115|2018_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00027   20.7   0.0    0.00049   19.9   0.0    1.4  1  PF00249.26 Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.6e-08   0.00049      19      47 ..       3      29 ..       1      30 [. 0.93

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 3.6e-08
                TTS-.HHHHHHHCTTTS-HHHHHHHHHHH CS
  PF00249.26 19 lGggtWktIartmgkgRtlkqcksrwqky 47
                +G + W ++a  +g +R   q++s+ qky
  MMETSP1325-20131115|2018_1  3 YGRR-WTKVADIVG-TRNTVQVRSHAQKY 29
                8877.*********.*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 1118.30
//
Query:       MMETSP1325-20131115|2028_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0008   18.9   0.2    0.00091   18.7   0.2    1.2  1  PF14088.1  Domain of unknown function (DUF4268)
  ------ inclusion threshold ------
      0.037   13.9   0.8      0.048   13.5   0.6    1.2  1  PF09304.5  Cortexillin I, coiled coil
      0.064   13.5   2.1      0.093   13.0   0.0    2.1  2  PF10400.4  Virulence activator alpha C-term


Domain annotation for each model (and alignments):
>> PF14088.1  Domain of unknown function (DUF4268)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.2     2e-07   0.00091      16      94 ..       7      86 ..       1     117 [. 0.85

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 2e-07
   PF14088.1 16 ekgslfknrkpsprnWinyst.GisgvslkavaskkearvelyiekedkeenkelFeqLesqkeeiekelgeeleWerld 94
                ++++l +n++p++   +n+ + Gi+gv  +++ + k++++e+ i+  ++   +++  qLe +++e+e++l e+ eW +  
  MMETSP1325-20131115|2028_1  7 HRKELKRNITPHTFDVFNTTAsGITGVIATVKTKIKKVEAEIKIDGINRLDFEKHRLQLETKRAELEAKLAENEEWTKGY 86
                4446777888887766666545******99999999****************************************9854 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.6   1.1e-05     0.048      56     105 ..      30      79 ..       6      81 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.1e-05
   PF09304.5  56 rekrlrelqakidellknlekeklakleLesrlskaekDkaileLkLaea 105
                  +  ++ +++ki+ +  ++  + + +l+ e+++++ e  +a le kLae 
  MMETSP1325-20131115|2028_1  30 ITGVIATVKTKIKKVEAEIKIDGINRLDFEKHRLQLETKRAELEAKLAEN 79 
                 566789999***************************************97 PP

>> PF10400.4  Virulence activator alpha C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     2e-05     0.093       6      45 ..      45      84 ..      40      96 .. 0.91
   2 ?   -0.5   0.3      0.33   1.5e+03      71      79 ..     153     161 ..     152     163 .] 0.85

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2e-05
                HHHHHHHGGGTS-HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF10400.4  6 ellvKlralavldpealraeleerlelheeklatyeriek 45
                e  +K+ +++ ld e+ r +le+ +++ e+kla+ e++ k
  MMETSP1325-20131115|2028_1 45 EAEIKIDGINRLDFEKHRLQLETKRAELEAKLAENEEWTK 84
                6679*********************************986 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.33
                 HHHHHHHHH CS
   PF10400.4  71 feqawieWc 79 
                 fe aw+ W+
  MMETSP1325-20131115|2028_1 153 FEAAWLSWA 161
                 899*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       699  (0.0511264); expected 273.4 (0.02)
Passed bias filter:                      584  (0.042715); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.53
# Mc/sec: 736.99
//
Query:       MMETSP1325-20131115|2029_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-14   54.2   0.0    1.5e-14   53.6   0.0    1.3  1  PF00583.19 Acetyltransferase (GNAT) family
    6.2e-07   29.3   0.0      1e-06   28.6   0.0    1.3  1  PF13508.1  Acetyltransferase (GNAT) domain
    7.2e-07   29.2   0.0    1.4e-06   28.3   0.0    1.5  1  PF13673.1  Acetyltransferase (GNAT) domain
    8.5e-06   25.5   0.2      0.044   13.5   0.0    2.4  2  PF13527.1  Acetyltransferase (GNAT) domain
    2.9e-05   23.6   0.0    5.2e-05   22.8   0.0    1.4  1  PF08445.5  FR47-like protein
    0.00011   22.4   0.0    0.00019   21.6   0.0    1.3  1  PF13302.1  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> PF00583.19  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   6.4e-18   1.5e-14       3      82 ..     133     228 ..     131     229 .. 0.90

  Alignments for each domain:
  == domain 1    score: 53.6 bits;  conditional E-value: 6.4e-18
                 ETTEBEEEEEEEEECTTS........CS........TTEEEEEEEEESGGGTTTT-HHHHHHHHHHHHHHTTHSEEEEEEETTCHHHHHHHHHTT- CS
  PF00583.19   3 edgelvGfaslsvigedg........ra........ertayieglaVspeyrgqGiGkaLleallekarerglerielevesgndraiklYeklGF 82 
                  d+ lvG + +s+ +++g        +a        +   yi +l+++ + r++G++k+L++a+++ ar +g++r +l+v+ + ++a +lYe +G+
  MMETSP1325-20131115|2029_1 133 SDDDLVGLIEVSMQPQTGatappfpvPAflkrlsirPLFPYISNLVIADKERRKGYAKRLVRACEQQARGWGYDRCYLHVDLNYPPAAALYEGMGY 228
                 6899************998877766611555677889**********************************************************8 PP

>> PF13508.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   4.5e-10     1e-06       3      77 ..     124     228 ..     122     229 .. 0.75

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 4.5e-10
   PF13508.1   3 ehflvled..dgeivGflvl.................redgeta..........yiggvavdpeyrgkGlGskllnklkeey...gekpivllar...parkkFYeklGF 77 
                 + ++v+ d  d+++vG + +                 +                yi++++++++ r+kG++++l++ +++++   g ++++l+++   p + + Ye +G+
  MMETSP1325-20131115|2029_1 124 HCVFVATDdsDDDLVGLIEVsmqpqtgatappfpvpaF-----LkrlsirplfpYISNLVIADKERRKGYAKRLVRACEQQArgwGYDRCYLHVDlnyPPAAALYEGMGY 228
                 56777777678999999999888777777766444440.....24455555556************************98884445699***985334789999999997 PP

>> PF13673.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0     6e-10   1.4e-06       1     117 []      78     228 ..      78     228 .. 0.84

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 6e-10
   PF13673.1   1 Dlpalaalvsdviesqradtseeqvaaw...rlleaelkeiladgsstivvaergg..evvGf..aglkpdas.......................lsllyvrpeargrGigraLldaieaeark.gikvltte...asklarplyerlGf 117
                 D+p++ +l+++++ +      e+ +  w   + + a++    +d++++++va+++    +vG+  ++++p++                        +s l ++ + r++G+++ L++a e++ar  g+++ +++   + ++a +lye +G+
  MMETSP1325-20131115|2029_1  78 DIPRIVELAATTFGAADPENVEDRLFRWsvdKGFHARIGGDWDDRDHCVFVATDDSddDLVGLieVSMQPQTGatappfpvpaflkrlsirplfpyISNLVIADKERRKGYAKRLVRACEQQARGwGYDRCYLHvdlNYPPAAALYEGMGY 228
                 99*********999987777788888886654555555555666789*****88643499***444566544457999999999999999999999******************************9999999888*9***********98 PP

>> PF13527.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00027      0.62       2      55 ..      71     139 ..      70     146 .. 0.74
   2 !   13.5   0.0   1.9e-05     0.044      75     128 .]     173     231 ..     167     231 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00027
   PF13527.1   2 irelteedldeilellkyvFqdeespl.......keireakrnlle......egrvlgaed..ngklvg 55 
                 +r++t  d+++i+el ++ F+  +++        +   + ++ +++      ++ v++a d  +++lvg
  MMETSP1325-20131115|2029_1  71 LRRATVHDIPRIVELAATTFGAADPENvedrlfrWSVDKGFHARIGgdwddrDHCVFVATDdsDDDLVG 139
                 89***********************99987666655556666666666655445566666666666776 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 1.9e-05
   PF13527.1  75 gvtgVatapehrgrgllrkLlarlleemrergqplsilfP.....ssypiYrrfGyeia 128
                 +++    a  +r++g++++L+++  +++r +g+   +l+       ++++Y+ +Gy+i+
  MMETSP1325-20131115|2029_1 173 YISNLVIADKERRKGYAKRLVRACEQQARGWGYDRCYLHVdlnypPAAALYEGMGYGIV 231
                 6778888999***********************9999864443227789*******986 PP

>> PF08445.5  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   2.3e-08   5.2e-05      18      78 ..     168     229 ..     163     237 .. 0.87

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 2.3e-08
                 --TT------EE-GGG--------HHHHHHHHHH---S-.EEEEEETT-HHHHHHHHH---B CS
   PF08445.5  18 rkdggelgalqvlpehrrrGlgsrlvkalakeiaergkt.vllvvvasNtpsirlyeklGfe 78 
                 r+ + +++ l + ++ rr+G+++rlv+a  ++ +  g++   l+v  +  p+ +lye +G+ 
  MMETSP1325-20131115|2029_1 168 RPLFPYISNLVIADKERRKGYAKRLVRACEQQARGWGYDrCYLHVDLNYPPAAALYEGMGYG 229
                 555678999**************************776526799999999**********95 PP

>> PF13302.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   8.3e-08   0.00019       3     140 ..      70     227 ..      69     228 .. 0.74

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 8.3e-08
   PF13302.1   3 lLrplteeDaealhelrsdpevmrylawgpppktleeteawl.es.....rakawkatgfgvfaicdketgefiGdiglkleedeeew....................peig.ymlapeywgkGyatealralldyafeelglerlvaiidaeNeaSrrvleklG 140
                  Lr+ t +D++++ el      + + a++p    ++   +w  ++      + +w++++++vf+ +d ++++++G i +   +++++                     p i  + +a++ ++kGya+  +ra+ + a +  g +r +  +d + ++  +++e +G
  MMETSP1325-20131115|2029_1  70 KLRRATVHDIPRIVELAA----TTFGAADPE-NVEDRLFRWSvDKgfharIGGDWDDRDHCVFVATDDSDDDLVGLIEVS-MQPQTGAtappfpvpaflkrlsirplfPYISnLVIADKERRKGYAKRLVRACEQQA-RGWGYDRCYLHVDLNYPPAAALYEGMG 227
                 5999************95....344333333.222222222221223334788899999*******999999*******3.3333333467889999999999999996666588*******************999.799999999999888888888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 1315.33
//
Query:       MMETSP1325-20131115|2030_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 980.33
//
Query:       MMETSP1325-20131115|2024_1  [L=579]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-10   40.7  17.3    1.5e-10   40.7  12.0    1.7  2  PF03619.11 Organic solute transporter Ostalpha


Domain annotation for each model (and alignments):
>> PF03619.11  Organic solute transporter Ostalpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.4      0.11   1.5e+03      15      30 ..     102     116 ..      74     151 .. 0.59
   2 !   40.7  12.0   1.1e-14   1.5e-10       3     274 .]     177     444 ..     172     444 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.11
  PF03619.11  15 allislvlilehllny 30 
                 a+ + lv i+ h+++y
  MMETSP1325-20131115|2024_1 102 AISM-LVAIFLHVMYY 116
                 2222.12233333333 PP

  == domain 2    score: 40.7 bits;  conditional E-value: 1.1e-14
  PF03619.11   3 llllvagvfvllall.islvlilehllnykkpeeQrliirillmvPiYavesflsllfskaaiylelirdcYeafviytFlslliaylggeeeiievlekkkkiehslpllesvlllktkaldpeflkaiklgvlqyvvlkpilal.lalileafgvygegsfslksgylyltiilniSvslaLYsLvlFykalkeeLapikpllKflciKliiFlsfWQgiilsvlsslglikkseakeeeeelkaaiqnlliciE.mlifaiahlyaFsvkey 274
                 + ++va+v++++ ++ +++++    +++  + ++ r+ + +l+  P+ +  +f+ +++++  +y el+  + +  vi+ F + + + lgg +++++ le+ +++  +    + + ++ t + d  f+k +  ++ +y+++  +  l l++i+ a+ + ++g+ ++      +++   + v + + +L++ y+a+++ +a ikp +K++++Kl  F+ f Qgiil + +s+  ++++ + + +  +   +qn l+ +E mli+ +++  aF+ ++y
  MMETSP1325-20131115|2024_1 177 WSIIVATVTTWIMFFrMATWHYSVEATTIYMVRLRRKTVVMLFCFPLMSTMCFVNIWYPSFFVYQELLMCIVDVAVIMLFTAIIAQHLGGWRRTVQYLEQLPPAPYLATP-PVLGFWYTCMPDIAFTKKLAECI-RYMFIEGMAGLsLVMIVGAIYKLSSGDDNF----HLMAAGEAFFVLWTMQALLVIYYATRDAMATIKPGWKIIVLKLYNFIEFIQGIILGLAFSATRLDPDLYCSID-LYVKVWQNGLVSVElMLIMIFIMPRAFPPSDY 444
                 34444444444433224444444444444555666666679999*******************************************************99998855444.56899999999999999998876.799998776552456667777777777666....55677788999*****************************************************998888766.88889*********445566677789988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       607  (0.0443973); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.89u 0.37s 00:00:01.26 Elapsed: 00:00:00.53
# Mc/sec: 2617.91
//
Query:       MMETSP1325-20131115|2032_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|2033_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 135.64
//
Query:       MMETSP1325-20131115|2031_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.8   2.4       0.34   10.9   1.7    1.5  1  PF10658.4 Protein of unknown function (DUF2484)


Domain annotation for each model (and alignments):
>> PF10658.4  Protein of unknown function (DUF2484)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.7   2.5e-05      0.34       6      40 ..     130     164 ..     120     176 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 2.5e-05
   PF10658.4   6 ilaclwvlaanvvallPsrdnhwrrayvLialgip 40 
                 ++ ++++  + ++a+lPs dn  +  ++Li++g +
  MMETSP1325-20131115|2031_1 130 VALIVAAAHSLMAAVLPSTDNEKIVTCILILVGSV 164
                 344566777889********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       755  (0.0552224); expected 273.4 (0.02)
Passed bias filter:                      421  (0.0307929); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|2035_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|2036_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-07   29.1   0.1    9.6e-07   28.4   0.1    1.3  1  PF07439.6  Protein of unknown function (DUF1515)
     0.0088   14.0   7.1      0.012   13.6   4.9    1.0  1  PF05557.8  Mitotic checkpoint protein
  ------ inclusion threshold ------
      0.015   14.7   2.0       0.02   14.3   1.4    1.1  1  PF05565.6  Siphovirus Gp157
      0.026   14.3   1.1      0.026   14.3   0.8    2.0  1  PF08802.5  Cytochrome B6-F complex Fe-S subunit
      0.028   14.1  10.5      0.041   13.5   7.3    1.1  1  PF12718.2  Tropomyosin like
      0.041   12.1   4.0      0.054   11.8   2.8    1.0  1  PF10359.4  RNA pol II promoter Fmp27 protein domain
      0.059   13.1   0.2      0.089   12.5   0.1    1.2  1  PF04678.8  Protein of unknown function, DUF607
      0.067   12.9   0.1       0.11   12.2   0.1    1.4  1  PF14235.1  Domain of unknown function (DUF4337)
      0.077   13.2   5.1       0.12   12.6   3.6    1.2  1  PF06156.8  Protein of unknown function (DUF972)
      0.089   12.5   6.1       0.13   12.0   4.2    1.1  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein
      0.099   11.6   1.1       0.13   11.2   0.7    1.1  1  PF07246.6  Phlebovirus nonstructural protein NS-M
        0.1   12.1   0.8         15    5.1   0.7    2.3  2  PF12592.3  Protein of unknown function (DUF3763)
       0.35    9.6   5.7       0.46    9.2   3.9    1.1  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.39    8.9   2.8       0.51    8.5   2.0    1.0  1  PF03961.8  Protein of unknown function (DUF342)
       0.45    9.9   2.9       0.67    9.3   2.0    1.2  1  PF03255.9  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
       0.54    9.9  12.5          1    9.1   8.7    1.4  1  PF12329.3  TATA element modulatory factor 1 DNA binding
        0.8    9.0   7.0        1.4    8.2   4.7    1.6  1  PF04977.10 Septum formation initiator
        1.3    8.8   9.5        3.5    7.5   2.1    2.5  2  PF01166.13 TSC-22/dip/bun family
        2.4    8.4  11.9        5.1    7.3   8.2    1.5  1  PF06005.7  Protein of unknown function (DUF904)
        5.3    6.3   7.6        7.8    5.8   5.3    1.1  1  PF05529.7  B-cell receptor-associated protein 31-like
        9.3    5.9  12.0         14    5.4   5.7    2.1  2  PF12958.2  Protein of unknown function (DUF3847)


Domain annotation for each model (and alignments):
>> PF07439.6  Protein of unknown function (DUF1515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.1   1.5e-09   9.6e-07      15      96 ..      24     106 ..      11     116 .. 0.89

  Alignments for each domain:
  == domain 1    score: 28.4 bits;  conditional E-value: 1.5e-09
   PF07439.6  15 aevkelredlkrsedrsdasrakmyrkmdelvervtalegsvvklkaditsvkevtedvkkwklmGlGalGviGiaaaala.v 96 
                   v+el  ++k  e++s+a++++ + +++el e+ + le  + k+++ + + +e  + +k   l+Gl a+Gv+ + a + + v
  MMETSP1325-20131115|2036_1  24 DRVEELLMQIKGLEEQSSAQKVEAKAQVEELREKNKELEHKMKKVREALKDHREAVDRLKARALLGLLAFGVVAMPALTYGlV 106
                 35899999******************************************************************998776644 PP

>> PF05557.8  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   4.9   1.8e-05     0.012      98     173 ..      15      86 ..      11      88 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.8e-05
   PF05557.8  98 laeeyekeldknleLevklkaleekekkaeneaeeaeeeakllkkkldaekkklqkekedqlkeakesisviknel 173
                 lae +e   d+  eL +++k lee++   + ea+ + ee++  +k+l+ + kk+     + lk+ +e + ++k+++
  MMETSP1325-20131115|2036_1  15 LAETCEMADDRVEELLMQIKGLEEQSSAQKVEAKAQVEELREKNKELEHKMKKV----REALKDHREAVDRLKARA 86 
                 7999**************************************************....556777777777777765 PP

>> PF05565.6  Siphovirus Gp157
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.4   3.1e-05      0.02      37      95 ..      21      83 ..       9      93 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.1e-05
   PF05565.6 37 efeeKveniakviknleadiea....ikaekkrleerkksienkvkrlkdyleeameatgqkk 95
                 +++ ve+++++ik le + +a     ka+ ++l e++k  e k+k++++ l+++ ea+++ k
  MMETSP1325-20131115|2036_1 21 MADDRVEELLMQIKGLEEQSSAqkveAKAQVEELREKNKELEHKMKKVREALKDHREAVDRLK 83
                468899999999999977666611114555668999****************99988887665 PP

>> PF08802.5  Cytochrome B6-F complex Fe-S subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.8     4e-05     0.026       7      35 ..      83     109 ..      80     110 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4e-05
   PF08802.5   7 srRqlLNllllGavalpalgalyPvvkff 35 
                   R lL+ll +G+va pal+  y+ v++f
  MMETSP1325-20131115|2036_1  83 KARALLGLLAFGVVAMPALT--YGLVSYF 109
                 579**************986..8888887 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   7.3   6.3e-05     0.041      10      67 ..      20      81 ..      16      86 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.3e-05
   PF12718.2 10 enaqekaeeleeklKeleqene....kkEeeiksLqkKnqqlEeevekleeqlkeakeklee 67
                e a +++eel  ++K le+++     ++  ++++L +Kn++lE+ + k++e+lk+++e+++ 
  MMETSP1325-20131115|2036_1 20 EMADDRVEELLMQIKGLEEQSSaqkvEAKAQVEELREKNKELEHKMKKVREALKDHREAVDR 81
                67899************9875411115567899************************99875 PP

>> PF10359.4  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.8   8.2e-05     0.054     161     229 ..      15      78 ..       9      86 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 8.2e-05
   PF10359.4 161 ervqlelleeRlkeleeqikkleeklkelelnkddeelqkdleelekelselkerleflekeleeleke 229
                  +  +e++ +R +el  qik lee+++ ++      e + ++eel ++ +el++++++++++l++ +++
  MMETSP1325-20131115|2036_1  15 LAETCEMADDRVEELLMQIKGLEEQSSAQKV-----EAKAQVEELREKNKELEHKMKKVREALKDHREA 78 
                 5667899******************999887.....777788888888888888888888888776654 PP

>> PF04678.8  Protein of unknown function, DUF607
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   0.00014     0.089      38     114 ..      26     103 ..       8     107 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00014
   PF04678.8  38 vkklvelllellkveeeklsreeelrkrleelseelaaleeekkeidkkae....ararrllwaglallsvqlgvlarLTf 114
                 v +l+ ++  l ++++++   + e ++++eel+e+ ++le++ k+++++++    a  r  + a l+ll+  ++++  LT+
  MMETSP1325-20131115|2036_1  26 VEELLMQIKGLEEQSSAQ---KVEAKAQVEELREKNKELEHKMKKVREALKdhreAVDRLKARALLGLLAFGVVAMPALTY 103
                 555555555555444444...556666777777777777777777777777443222233355555666666666666776 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   0.00017      0.11      54     114 ..      19      83 ..      16     124 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00017
   PF14235.1  54 aelaaelleleaks....aaelkkkiekykkekkrikseakeleakakeaeeesdealhkhhrfa 114
                  e+a + +e+  ++    +++  ++  + k++ ++ ++++kele+k k+  e+ +++ +  +r++
  MMETSP1325-20131115|2036_1  19 CEMADDRVEELLMQikglEEQSSAQKVEAKAQVEELREKNKELEHKMKKVREALKDHREAVDRLK 83 
                 67777777777777777777777777778888888888888888888887777666666655554 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.6   0.00018      0.12       5      58 ..      28      78 ..      22      87 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00018
   PF06156.8  5 elfdklseleeqleelleeleelkkelkelleenaelkleneklrerleeleee 58
                el+ +++ leeq ++   +  e k++++el e+n+el+ + +k+re l++ +e+
  MMETSP1325-20131115|2036_1 28 ELLMQIKGLEEQSSA---QKVEAKAQVEELREKNKELEHKMKKVREALKDHREA 78
                677788888887665...566789************************998774 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   4.2    0.0002      0.13      16      75 ..      23      83 ..      17      86 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.0002
                -HHHHHHGGGGS--TTT--.-HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHH CS
   PF07200.8 16 edkleefvkeldqvqdlne.ekeellaqnesLaeenlekepqleelkaqlqdkleelkkle 75
                +d++ee++++++ ++++++ +k e++aq+e+L e+n e+e+++++ ++ l+d  e +  l+
  MMETSP1325-20131115|2036_1 23 DDRVEELLMQIKGLEEQSSaQKVEAKAQVEELREKNKELEHKMKKVREALKDHREAVDRLK 83
                56778888888888877642789*****************************999998887 PP

>> PF07246.6  Phlebovirus nonstructural protein NS-M
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7    0.0002      0.13     190     240 ..      32      80 ..      16     102 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.0002
   PF07246.6 190 dikrgqekrdakklveesmArvkdlkeelkiltdelsqikseiqilrkkik 240
                 +ik  +e+ +a+k+  e++A+v++l+e++k l   ++++++ ++ +r+ + 
  MMETSP1325-20131115|2036_1  32 QIKGLEEQSSAQKV--EAKAQVEELREKNKELEHKMKKVREALKDHREAVD 80 
                 35545555555554..789**************************998764 PP

>> PF12592.3  Protein of unknown function (DUF3763)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.7     0.023        15       1      22 [.      50      71 ..      50      76 .. 0.86
   2 ?    4.3   0.0     0.041        27      29      50 ..     186     207 ..     186     208 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.023
   PF12592.3  1 qakelleqLdeleqelrkqRtl 22
                q++el e+ +ele++++k+R+ 
  MMETSP1325-20131115|2036_1 50 QVEELREKNKELEHKMKKVREA 71
                5789999*************85 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.041
   PF12592.3  29 hlFiesewLaaIEaSllqlseq 50 
                 +  i + wL +IE  l +l ++
  MMETSP1325-20131115|2036_1 186 CCHIGRGWLDEIEVGLTRLESE 207
                 6679999**********99875 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.9   0.00071      0.46      41      98 ..      24      84 ..      13      87 .. 0.54

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00071
   PF10186.4 41 kkveealeeaene.......kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelke 98
                 +vee+l     +       +  ++ + k++v++ +e+++++ +++++ +e+++  re +++lk+
  MMETSP1325-20131115|2036_1 24 DRVEELLM----QikgleeqSSAQKVEAKAQVEELREKNKELEHKMKKVREALKDHREAVDRLKA 84
                55666665....11112333444455555666666666666666666666666666666665553 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.0   0.00079      0.51     344     408 ..      20      82 ..      10      89 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00079
   PF03961.8 344 eeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                 e   +++e+l  ++k l++  ++++++ e k+q+e+l+e+ ++l+ +++++++ lk+  e +++ 
  MMETSP1325-20131115|2036_1  20 EMADDRVEELLMQIKGLEE--QSSAQKVEAKAQVEELREKNKELEHKMKKVREALKDHREAVDRL 82 
                 4555666666666777777..56778899999999999999999999999999999988888877 PP

>> PF03255.9  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.0     0.001      0.67       7      49 ..      24      66 ..      18      86 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.001
   PF03255.9  7 kplaelekkieelkklaekkdvdvseeiekLekkleklkkeiy 49
                +++ el  +i+ l++ ++ ++v++++++e+L++k ++l++++ 
  MMETSP1325-20131115|2036_1 24 DRVEELLMQIKGLEEQSSAQKVEAKAQVEELREKNKELEHKMK 66
                6789999***************************999987764 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   8.7    0.0015         1      12      70 ..      31      86 ..      20      87 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0015
   PF12329.3 12 eqIaqLmeEgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerl 70
                 qI+ L    e+ s+++ + ++++ +Lr+knkele ++++  + l++  + +++l++r+
  MMETSP1325-20131115|2036_1 31 MQIKGLE---EQSSAQKVEAKAQVEELREKNKELEHKMKKVREALKDHREAVDRLKARA 86
                5666676...88899999*************************************9985 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.7    0.0022       1.4      23      59 ..      41      81 ..      30      94 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0022
  PF04977.10 23 kqeiaalqaelaklkaeneeLeaevkdLks....dedyiee 59
                 ++ ++ +a++++l+++n+eLe++ k+ +      ++++++
  MMETSP1325-20131115|2036_1 41 SAQKVEAKAQVEELREKNKELEHKMKKVREalkdHREAVDR 81
                57889999999999999999999999986555545555554 PP

>> PF01166.13  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.2     0.029        19      15      37 ..      25      47 ..      23      50 .. 0.88
   2 ?    7.5   2.1    0.0054       3.5      16      35 ..      51      70 ..      47      79 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.029
  PF01166.13 15 EVevLkeqIkeLeeknsklerEn 37
                 Ve+L  qIk Lee+ s+ + E 
  MMETSP1325-20131115|2036_1 25 RVEELLMQIKGLEEQSSAQKVEA 47
                59**************9999886 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0054
  PF01166.13 16 VevLkeqIkeLeeknskler 35
                Ve+L+e+ keLe+k++k+++
  MMETSP1325-20131115|2036_1 51 VEELREKNKELEHKMKKVRE 70
                9**************99875 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   8.2    0.0078       5.1      14      64 ..      20      84 ..      14      92 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0078
                HHHHHHHHHHHHHHHHHHHHHHHHH...........HHHHHHHHHHHHHH...HHH---TTHHHH CS
   PF06005.7 14 qqAvdtialLqmeieeLkeeneqlk...........eeneeLeeenkklk...eereawqerlra 64
                ++A d+++ L m i+ L+e+++++k           e+n+eLe + kk++   +++ +  +rl+a
  MMETSP1325-20131115|2036_1 20 EMADDRVEELLMQIKGLEEQSSAQKveakaqveelrEKNKELEHKMKKVRealKDHREAVDRLKA 84
                56778999999*******99888889999777777777777777777777888888888888863 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   5.3     0.012       7.8     119     183 ..      26      86 ..      23      88 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.012
   PF05529.7 119 vvtlvselvkleeklealkkqaesatkaakklkeekekklkeeveklkkeleekekdlealkkqa 183
                 v +l++++  lee++ a k +a++++++ +    ek+k+l+++++k+++ l+++++ +++lk +a
  MMETSP1325-20131115|2036_1  26 VEELLMQIKGLEEQSSAQKVEAKAQVEELR----EKNKELEHKMKKVREALKDHREAVDRLKARA 86 
                 555666666667776666666666665555....9***************************875 PP

>> PF12958.2  Protein of unknown function (DUF3847)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.2     0.088        57      58      82 ..      16      40 ..      10      44 .. 0.83
   2 ?    5.4   5.7     0.022        14       4      50 ..      38      86 ..      34      88 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.088
   PF12958.2 58 eepeeLTdeevkeLLeealktkevk 82
                 e+ e+ d+ v+eLL ++  ++e  
  MMETSP1325-20131115|2036_1 16 AETCEMADDRVEELLMQIKGLEEQS 40
                67889**********9998887765 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.022
   PF12958.2  4 eqlreeiekaekklrkaeeklkqLknqekklek..keRkeRtHRLitrg 50
                eq ++++ +a++++++  ek k L++++kk+ +  k+ +e + RL  r+
  MMETSP1325-20131115|2036_1 38 EQSSAQKVEAKAQVEELREKNKELEHKMKKVREalKDHREAVDRLKARA 86
                456788999*********************9975667777778887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1713  (0.125293); expected 273.4 (0.02)
Passed bias filter:                     1143  (0.0836015); expected 273.4 (0.02)
Passed Vit filter:                       243  (0.0177736); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.83u 0.40s 00:00:01.23 Elapsed: 00:00:00.50
# Mc/sec: 1049.60
//
Query:       MMETSP1325-20131115|2027_1  [L=837]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-29  100.2   0.3    8.7e-18   64.2   0.0    2.5  3  PF00069.20 Protein kinase domain
      4e-10   39.1   0.0    0.00073   18.6   0.0    2.2  2  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   2.9e-12     2e-08       4      69 ..     265     338 ..     262     361 .. 0.89
   2 !   64.2   0.0   1.3e-21   8.7e-18      70     218 ..     420     610 ..     416     640 .. 0.80
   3 ?   -8.5   3.4         2   1.4e+04      32      43 ..     819     830 ..     807     835 .. 0.43

  Alignments for each domain:
  == domain 1    score: 33.6 bits;  conditional E-value: 2.9e-12
                 EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.......HHHHHHHH.H-TTB--EEEEEEE CS
  PF00069.20   4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.......Elkilkkl.sHpnivkllevfee 69 
                 ++ +G+G+fG+V++a +k +++++A+Ki++ ++ k++  +++ +       E++ +++l  Hp++v ++ ++ e
  MMETSP1325-20131115|2027_1 265 ERPIGRGGFGTVFRAANKVDNNEYALKIVSLDQPKHEGPQEQSKheeqalaEAQAMAQLrPHPHVVGYHTSWVE 338
                 589****************************99999988887778899999********66*****99887655 PP

  == domain 2    score: 64.2 bits;  conditional E-value: 1.3e-21
                 STEEEEEEE--SC-..EHHHHHH............HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E.....................EE------EEE...CEESS-CSS----GGGS-HHHHH.........TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTT CS
  PF00069.20  70 kdelylvleyvegg..dlfdllk............kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel.....................kiaDFGlakkl...eksseklttlvgtreYmAPEvll.........kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkk 218
                 +++l++ le+++ +  +l d+l+            + ++ +++++ ++++q+++g++++H + i HrDLKpeN+++   +e                      +i DF la+       + e+ ++++gt  Y  P v           +++++ ++ D+++l+vil el++  + + ++    ++e+ie  ++++
  MMETSP1325-20131115|2027_1 420 SRRLVIQLELCRPDgyTLRDWLNdrnsrratpehaQITPCEKDDALDVFRQLVSGVAHIHGHDIEHRDLKPENVFFRGVKEGapadasagakadgapgsvgecCIGDFSLARLGasaAGPAESDDEQCGTYAYT-PRVRSkkrvvpsdtEGEGARHAHDMYGLAVILCELVCPVATMVER----AKEVIEVLKRGE 610
                 667888888888776777788887777777775544555699**********************************95554467***************************97799989999999999999997.555334778889999*********************965444433....455555555555 PP

  == domain 3    score: -8.5 bits;  conditional E-value: 2
                 EEGGGHHHHHHH CS
  PF00069.20  32 lkkeeekskkek 43 
                  kk+++k+kk+k
  MMETSP1325-20131115|2027_1 819 KKKKKKKKKKKK 830
                 222222222222 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   1.1e-07   0.00073       5      68 ..     266     334 ..     263     345 .. 0.74
   2 !   18.2   0.0   1.4e-07   0.00094      87     238 ..     436     623 ..     414     631 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 1.1e-07
                 EEE-------EEEEEEETTTTSSEEEEE.EEEECT...TSBHHHHHHHHHHHHHHHHT.-BTTB--BEE CS
  PF07714.12   5 kklGeGafGkVvegtlkgekekkevkVa.vKtlke...saeeeekeefleeakimkkl.khpnivkllg 68 
                 + +G+G fG+V+++  k ++++  +k++ + + k+   +++++++e+ l ea++m +l  hp++v ++ 
  MMETSP1325-20131115|2027_1 266 RPIGRGGFGTVFRAANKVDNNEYALKIVsLDQPKHegpQEQSKHEEQALAEAQAMAQLrPHPHVVGYHT 334
                 679************99544444444331333333444677777999***********9******8765 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 1.4e-07
                 -HHHHHHHT..........GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET.....................TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE..........EEHHHHHHH---HHHHHHTTT-GTTTTS..HHHHHHHHHHTT-BS---TTSBHHHHHHH CS
  PF07714.12  87 dLlefLrkk..........ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee.....................ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk..........ftsksDvWsfGvllwEiftlgespypgl..sneevlellkegkrlekpekcpeelyelm 238
                 +L++ L+++          + + ++ +d l++  q+ +G+++++ +++ HrdL   Nv+                           + i+Df Lar   +     +++++++    + p + ++k+            ++ D++   v+l E+++    p++++   ++ev+e lk+g   e p+ +p++l  l+
  MMETSP1325-20131115|2027_1 436 TLRDWLNDRnsrratpehaQITPCEKDDALDVFRQLVSGVAHIHGHDIEHRDLKPENVFFRGvkegapadasagakadgapgsVGECCIGDFSLARLGASAAGPAESDDEQCGTYAYTPRVRSKKRvvpsdtegegARHAHDMYGLAVILCELVC----PVATMveRAKEVIEVLKRG---EVPAGVPDDLSALV 623
                 6777777767777777666667778899*******************************998889***************997779**********996666556666666655556666666666688888888899***************99....6666632444555555544...45555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (837 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1237  (0.0904769); expected 273.4 (0.02)
Passed bias filter:                      424  (0.0310123); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.45u 0.35s 00:00:01.79 Elapsed: 00:00:00.67
# Mc/sec: 2993.66
//
Query:       MMETSP1325-20131115|2034_1  [L=617]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.91u 0.37s 00:00:01.28 Elapsed: 00:00:00.61
# Mc/sec: 2423.86
//
Query:       MMETSP1325-20131115|2037_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-36  125.2  16.0    1.5e-36  124.9  11.1    1.1  1  PF03073.10 TspO/MBR family
  ------ inclusion threshold ------
      0.024   14.4   0.2       0.39   10.5   0.0    2.2  2  PF07670.9  Nucleoside recognition


Domain annotation for each model (and alignments):
>> PF03073.10  TspO/MBR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.9  11.1   2.2e-40   1.5e-36       2     148 .]      99     240 ..      98     240 .. 0.93

  Alignments for each domain:
  == domain 1    score: 124.9 bits;  conditional E-value: 2.2e-40
  PF03073.10   2 lalllvllvgvlgglltassvseWyasLkkPswtPpnwvFgpvWtvLYilmgiaaylvwkkgkgkeeaklalalyalqlvlnllWsplfFglkslalalieillllllvlatilaflkvsrlaalllvPYllWvsfatyLnasiwrl 148
                 l++++++l gv g  ++ ++v++Wy+s++kP wtPp+ +F+pvWt+LY+++g+++++v+++g      ++++ l ++++++nl+W p+fFg++++a++++  l ll++++ +++ f ++s +a+lllvPY +W++fa++Ln++iw l
  MMETSP1325-20131115|2037_1  99 LFIGISVLGGVSGTPVVIRNVGTWYESIRKPTWTPPSRIFAPVWTTLYAMLGMSMAIVANRG-----WTRLTSLALAHYFVNLAWAPVFFGMHKMAAGFLLQLGLLISLVPILAGFSDISTAAGLLLVPYTAWLLFASLLNYRIWAL 240
                 799*******************************************************9765.....44455555666678999*************************************************************75 PP

>> PF07670.9  Nucleoside recognition
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   5.7e-05      0.39      45     103 ..     102     157 ..      85     163 .. 0.91
   2 ?    1.7   0.0      0.03     2e+02      45      67 ..     202     224 ..     196     244 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 5.7e-05
   PF07670.9  45 svglitgllakevvvgtlgtlytlggamlegfltprealalllfvllytpcvatlaviv 103
                  ++++ g+    vv+ + gt y    ++ + ++tp++++ + ++++ly +   ++a+++
  MMETSP1325-20131115|2037_1 102 GISVLGGVSGTPVVIRNVGTWY---ESIRKPTWTPPSRIFAPVWTTLYAMLGMSMAIVA 157
                 688999****************...999**********************999998776 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.03
   PF07670.9  45 svglitgllakevvvgtlgtlyt 67 
                  v++++g+   ++++g+l ++yt
  MMETSP1325-20131115|2037_1 202 LVPILAGFSDISTAAGLLLVPYT 224
                 68899***************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 1139.40
//
Query:       MMETSP1325-20131115|2041_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-09   34.7   0.4     0.0014   18.2   0.0    2.6  3  PF00023.25 Ankyrin repeat
    1.5e-08   34.7   0.0      2e-08   34.3   0.0    1.3  1  PF12796.2  Ankyrin repeats (3 copies)
    9.7e-08   32.2   0.0    1.5e-07   31.6   0.0    1.5  1  PF13637.1  Ankyrin repeats (many copies)
      1e-07   31.3   0.0     0.0065   16.4   0.0    2.5  3  PF13606.1  Ankyrin repeat
      7e-07   29.1   0.0    1.9e-06   27.7   0.0    1.7  2  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.67   1.8e+03      16      23 ..      16      23 ..      14      28 .. 0.80
   2 !   14.1   0.0     1e-05     0.028      11      31 ..      26      46 ..      25      48 .. 0.84
   3 !   18.2   0.0   5.1e-07    0.0014       2      23 ..      50      71 ..      49      72 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.67
                HHHHHHHH CS
  PF00023.25 16 evvklLls 23
                ++v+ L+s
  MMETSP1325-20131115|2041_1 16 SIVQALVS 23
                79999987 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 1e-05
                HTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25 11 lrgnlevvklLlsqGAdlnaq 31
                l+ +++ v+ L+++GAd+na+
  MMETSP1325-20131115|2041_1 26 LCLSVDKVSQLIQKGADVNAV 46
                666777899**********97 PP

  == domain 3    score: 18.2 bits;  conditional E-value: 5.1e-07
                SCBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLls 23
                G TPL  Aa++g+l+++klLl+
  MMETSP1325-20131115|2041_1 50 GSTPLGNAARNGRLNIIKLLLD 71
                89******************97 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   7.4e-12     2e-08      39      80 ..      30      71 ..       5      72 .. 0.86

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 7.4e-12
   PF12796.2 39 leivklLleagadvnakdkegntpLhlAvrnghlelvklLle 80
                ++ v+ L+++gadvna +  g tpL  A+rng+l ++klLl+
  MMETSP1325-20131115|2041_1 30 VDKVSQLIQKGADVNAVSSFGSTPLGNAARNGRLNIIKLLLD 71
                566888999******************************996 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   5.4e-11   1.5e-07      17      54 .]      33      70 ..      11      70 .. 0.91

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 5.4e-11
   PF13637.1 17 vklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                v  L++kg+d+n++ ++G t+L  Aa++g+++i+klLl
  MMETSP1325-20131115|2041_1 33 VSQLIQKGADVNAVSSFGSTPLGNAARNGRLNIIKLLL 70
                66799********************************8 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.2   3.2e+03      16      23 ..      16      23 ..      12      27 .. 0.78
   2 !   12.4   0.0   4.7e-05      0.13      10      30 .]      25      45 ..      19      45 .. 0.87
   3 !   16.4   0.0   2.4e-06    0.0065       2      23 ..      50      71 ..      49      73 .] 0.92

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.2
   PF13606.1 16 elveaLle 23
                ++v+aL++
  MMETSP1325-20131115|2041_1 16 SIVQALVS 23
                68999986 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 4.7e-05
   PF13606.1 10 asngrielveaLlengadina 30
                + + +++ v+ L+++gad+na
  MMETSP1325-20131115|2041_1 25 CLCLSVDKVSQLIQKGADVNA 45
                6677899************97 PP

  == domain 3    score: 16.4 bits;  conditional E-value: 2.4e-06
   PF13606.1  2 GnTpLhlAasngrielveaLle 23
                G TpL  Aa+ngr++++++Ll+
  MMETSP1325-20131115|2041_1 50 GSTPLGNAARNGRLNIIKLLLD 71
                78******************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.88   2.4e+03      26      36 ..      12      22 ..       8      30 .. 0.80
   2 !   27.7   0.0   7.1e-10   1.9e-06       1      36 [.      36      70 ..      36      73 .] 0.95

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.88
   PF13857.1 26 ggalevvrlLl 36
                ++ +++v+ L+
  MMETSP1325-20131115|2041_1 12 YHPVSIVQALV 22
                77888999987 PP

  == domain 2    score: 27.7 bits;  conditional E-value: 7.1e-10
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLl 36
                L+++g advna   +g+tpL +Aa++g+l++++lLl
  MMETSP1325-20131115|2041_1 36 LIQKG-ADVNAVSSFGSTPLGNAARNGRLNIIKLLL 70
                78999.*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 296.50
//
Query:       MMETSP1325-20131115|2038_1  [L=416]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-30  104.8   0.3    2.3e-30  103.8   0.0    1.7  2  PF13849.1  Myotubularin Y_phosphatase-like
     0.0019   17.4   0.0      0.003   16.8   0.0    1.3  1  PF00102.22 Protein-tyrosine phosphatase
     0.0024   17.3   0.0      0.004   16.5   0.0    1.4  1  PF06602.9  Myotubularin-related
     0.0036   16.7   0.0     0.0068   15.8   0.0    1.4  1  PF00782.15 Dual specificity phosphatase, catalytic domain
     0.0065   16.2   0.1      0.013   15.2   0.1    1.5  1  PF12578.3  Myotubularin-associated protein
  ------ inclusion threshold ------
      0.015   15.4   0.0      0.028   14.5   0.0    1.3  1  PF13350.1  Tyrosine phosphatase family


Domain annotation for each model (and alignments):
>> PF13849.1  Myotubularin Y_phosphatase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       3.2   7.3e+03      19      31 ..      88     101 ..      86     104 .. 0.69
   2 !  103.8   0.0     1e-33   2.3e-30       2      54 ..     149     201 ..     148     202 .. 0.98

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 3.2
   PF13849.1  19 SLaqlll.Dpyyrt 31 
                 +La +l+ D++y  
  MMETSP1325-20131115|2038_1  88 ALAAMLMpDSEYSS 101
                 67766666999965 PP

  == domain 2    score: 103.8 bits;  conditional E-value: 1e-33
   PF13849.1   2 svlvhcsdGwDrtsqltSLaqlllDpyyrtiegfqvLIekeWlsfGhkfsdRc 54 
                 svlvhcsdGwDrt+q+++ +q+l+Dpyyrtiegf v+IekeWlsfGhkf++R+
  MMETSP1325-20131115|2038_1 149 SVLVHCSDGWDRTAQVCATSQMLMDPYYRTIEGFAVVIEKEWLSFGHKFQQRV 201
                 9***************************************************7 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.3e-06     0.003     167     196 ..     144     173 ..      97     186 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 1.3e-06
                 STTSS-EEEES------HHHHHHHHHHHHH CS
  PF00102.22 167 taksgpvvVhCsaGvgRtgtfvaldilleq 196
                 t + ++v+VhCs+G  Rt+ ++a + +l+ 
  MMETSP1325-20131115|2038_1 144 TFEGASVLVHCSDGWDRTAQVCATSQMLMD 173
                 57889******************9999875 PP

>> PF06602.9  Myotubularin-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.8e-06     0.004      79     117 ..      35      73 ..       7      74 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.8e-06
                 T-SSEEEEE-SSCHHHHHHHH-------TTTSTTEEEEE CS
   PF06602.9  79 eskkllivdarsktnavanrakGggleseekysnaelvf 117
                 +++ ++i+d r +++a+ n+ +G+g e+  +y  +el+f
  MMETSP1325-20131115|2038_1  35 TPRPFYIADCRGRVAATGNKLQGKGAENVANYTATELYF 73 
                 67889*****************************99987 PP

>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     3e-06    0.0068      55      92 ..     129     166 ..     108     188 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3e-06
                 CGGGHHHHHHHHHHHCC----EEEE-----HHHHHHHH CS
  PF00782.15  55 iskeleeavefiekaeqkgkkvlVHCqaGisRSatlii 92 
                 is  l++++   +k++ +g +vlVHC  G  R+a +++
  MMETSP1325-20131115|2038_1 129 ISLVLSASIWCAKKMTFEGASVLVHCSDGWDRTAQVCA 166
                 566666677777788899*****************997 PP

>> PF12578.3  Myotubularin-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   5.9e-06     0.013      67     101 ..     289     325 ..     274     336 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 5.9e-06
   PF12578.3  67 ssvP..adlhqlLlpqqlgldlslWsqcylRwiPeae 101
                 ++ P    +++ L p + ++dl+lW ++ylR  P a+
  MMETSP1325-20131115|2038_1 289 FTNPmyEMIEEPLWPKCAIRDLKLWERYYLRHDPDAH 325
                 455555668899*******************999886 PP

>> PF13350.1  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.2e-05     0.028     124     150 ..     147     173 ..     136     180 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.2e-05
   PF13350.1 124 egpvlfHCtaGKDRTGvvaalllsllg 150
                  ++vl+HC+ G DRT  v+a  + l++
  MMETSP1325-20131115|2038_1 147 GASVLVHCSDGWDRTAQVCATSQMLMD 173
                 469*****************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.57
# Mc/sec: 1718.77
//
Query:       MMETSP1325-20131115|2040_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-21   75.9   0.0    1.3e-18   66.9   0.0    2.1  2  PF08676.6 MutL C terminal dimerisation domain


Domain annotation for each model (and alignments):
>> PF08676.6  MutL C terminal dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   9.2e-23   1.3e-18      19     128 ..       4     116 ..       2     130 .. 0.89
   2 !    7.1   0.0   0.00024       3.3     122     142 ..     142     162 ..     129     164 .. 0.79

  Alignments for each domain:
  == domain 1    score: 66.9 bits;  conditional E-value: 9.2e-23
                 TTEEEEEEHHHHHHHHHHHHHHHHHHH-S-EEEEEEEEEEE--CCHHHHHHHCHHHHHH---EEEE....----EEEEEEEETTS---SHHHHHHHHHHHHCCHS.-HHCCHHHH CS
   PF08676.6  19 edglvlvdqhaAherilyeklkeklkeeeksQpLliPlvlelspeeaalleehkeeLeklGfelee....fgenslavrsvPallreqnleelirdlleelaekg.eseekleel 128
                 +++l+++dqha +e++++e l++++      QpL+ P  +e+s++e+ ++ e+ ++++ +Gf++++    +  ++l+v++vP   + +++ + i++l++ lae++  +++++++ 
  MMETSP1325-20131115|2040_1   4 GKDLFILDQHACEEKYNFETLQQTTTI--HEQPLICPRPVEVSASEEMTILENLDTFAANGFHFDTnddaPPTQRLRVTKVPFSKSVTFGDNDIHELASLLAEDSpGVTNSASAF 116
                 589*******************99988..9***********************************9999999*******************************995323333333 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.00024
                 HCCHHHHHHHHCT-------- CS
   PF08676.6 122 eekleellatlacrsaikagr 142
                   k+++++a+ acrsa++ g+
  MMETSP1325-20131115|2040_1 142 LPKISAMFASRACRSAVMIGT 162
                 56899*************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 967.76
//
Query:       MMETSP1325-20131115|2042_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 933.05
//
Query:       MMETSP1325-20131115|2039_1  [L=603]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-40  138.4   0.0    3.2e-40  137.8   0.0    1.2  1  PF00069.20 Protein kinase domain
    2.1e-18   66.2   0.0      5e-18   65.0   0.0    1.7  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.073   12.1   0.0       0.13   11.2   0.0    1.3  1  PF05753.9  Translocon-associated protein beta (TRAPB)
      0.099   11.5   0.0       0.18   10.7   0.0    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.8   0.0   9.3e-44   3.2e-40       4     256 ..     190     475 ..     187     477 .. 0.90

  Alignments for each domain:
  == domain 1    score: 137.8 bits;  conditional E-value: 9.3e-44
                 EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH....-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH.....HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E.........EE------EEECEESS-CSS----GGGS-HHH.HHTSHHHHHHHHHHHHHHHHHHHHC---TTTST..HHHHHHHHHCCCHHTTS--GGGGCSHHH...............HHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20   4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.Elkilkkls....Hpnivkllevfeekdelylvleyveggdlfdllk.....kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel.........kiaDFGlakkleksseklttlvgtreYmAPEv.llkakeytkkvDvWslGvilyelltgklpfsge..seedqleliekilkkkleedepksssks...............eelkdlikkllekdpakRltaeeilk 256
                  +++G+GsfG+V+ ++  + ++ v+vK+++k ++ s  + t++   l++l + +    Hpn++ l +v +++ ++ylv+  +++ d +++l+     k+  ++e  + ++++ ++++l ylH +g +HrD+K+eNi +d + +          +++DF l++    +s + t+ vg+  +mAPE+ +++ +   +k DvWs++++l el+ g++ f +   + ++q++++++  + ++   ++  + ++               + +  +++++l+ d+++R+ ++++ +
  MMETSP1325-20131115|2039_1 190 RDRIGNGSFGSVFACVTANGRD-VVVKKMQKAKKLSIRKMTQFAdQLHLLLEPDlrnrHPNLLYLDRVLQSSHHIYLVMPRLRC-DAYQMLEacvptKDSGFDEGLALQVVKPVVSALFYLHMQGYAHRDVKSENIAVDYTTSNtgeititdvRLIDFDLCC--RFNSVHITKCVGSLGFMAPELmIRRTPRFVAKLDVWSVACVLLELCMGCTWFTNVwlNVYRQYRTLRSLSSSDTGVAQRYVDLRQsllrnradsmsalshPLVLGMLERCLDVDAYSRIDLHSLAQ 475
                 679***************9996.**********9999999998875555554333456**************************.7777888888999999**************************************666667999*************9..79******************967789999************************99998899999999999999998888888877999999****9*99999*****************9988765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.0   1.5e-21     5e-18       2     202 ..     188     398 ..     187     477 .. 0.80

  Alignments for each domain:
  == domain 1    score: 65.0 bits;  conditional E-value: 1.5e-21
                 EEEEEE-------EEEEEEETTTTSSEEEEEEEEECT..TSBHHHHHHHHHHHHHHHH..T..-BTTB--BEEEBESSSSEEEEEE---B-...-HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET.........TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE..EEHHHHHHH---HHHHHHTTT CS
  PF07714.12   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlke..saeeeekeefleeakimkk..l..khpnivkllgvctkeepllivteyvkgG...dLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee.........ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk..ftsksDvWsfGvllwEiftlg 202
                 +l +++G+G+fG+V+ ++       +  +V+vK++++  + + ++ ++f + ++++ +  l  +hpn++ l  v  +++++++v+  ++      L+  + +k ++ ++    l+++  + +++ yL+ + + Hrd+ + N+ ++           + v++ Df L+ +     + ++ +++  ++ +mapE++ +++  f  k DvWs  ++l E++  +
  MMETSP1325-20131115|2039_1 188 SLRDRIGNGSFGSVFACVTA-----NGRDVVVKKMQKakKLSIRKMTQFADQLHLLLEpdLrnRHPNLLYLDRVLQSSHHIYLVMPRLRCDayqMLEACVPTK-DSGFDEGLALQVVKPVVSALFYLHMQGYAHRDVKSENIAVDYttsntgeitITDVRLIDFDLCCRF----NSVHITKCVGSLGFMAPELMIRRTprFVAKLDVWSVACVLLELCMGC 398
                 67899*************99.....8999****9965224556678999999999975333458*********************987654343677777777.****************************************97677644443334555555555555....77889999***********9887777*****************9866 PP

>> PF05753.9  Translocon-associated protein beta (TRAPB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.9e-05      0.13      35      61 ..     318     344 ..     312     349 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.9e-05
   PF05753.9  35 vegedltvtytiyNvGssaAldVslvD 61 
                 v+ e+++v+yt  N G+ + +dV+l D
  MMETSP1325-20131115|2039_1 318 VKSENIAVDYTTSNTGEITITDVRLID 344
                 7899**********************9 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   5.3e-05      0.18     102     169 ..     275     349 ..     263     355 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5.3e-05
   PF06293.9 102 aqdLaeilakwae.laeelkralleavGrliakmhragvnHtdlnahnilldeee......ekakvwliDldkar 169
                  q L++++ + ++ ++e l  ++++ v ++   +h +g +H+d    ni +d +          +v liD+d + 
  MMETSP1325-20131115|2039_1 275 YQMLEACVPTKDSgFDEGLALQVVKPVVSALFYLHMQGYAHRDVKSENIAVDYTTsntgeiTITDVRLIDFDLCC 349
                 6678888888666899999999999999999*********************999889766677899****9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.00u 0.37s 00:00:01.37 Elapsed: 00:00:00.54
# Mc/sec: 2675.93
//
Query:       MMETSP1325-20131115|2044_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-19   69.5   0.0    1.9e-19   69.2   0.0    1.1  1  PF02010.10 REJ domain


Domain annotation for each model (and alignments):
>> PF02010.10  REJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   1.4e-23   1.9e-19     266     435 ..       3     168 ..       2     173 .. 0.94

  Alignments for each domain:
  == domain 1    score: 69.2 bits;  conditional E-value: 1.4e-23
  PF02010.10 266 egklqpgksyrlslrVrdkeakkglAsisfkvNepPvgGrcsvfPleGveletaftvrCqgwkdkdq..PLgYevsysqrrasgpyrlLyegsnnrsssviLPsgpsqq.dykvyvmvsVydnkgarvsvnltitVkpaavnnstieellnnrtrngnelsvlletgddqrak 435
                 +++l  g++y+++l+++++ +  g++ + ++   pP +G +sv+P +G++l+++f++r+ +w+d+    PL++ + y    a+g  +++   ++  ++ ++LP g++   + ++ v     d +g++ +vn++++V +++ +++     ++   ++++ ++ l+e+gd+  a+
  MMETSP1325-20131115|2044_1   3 PNILAGGQTYAFKLSATNSHGAVGFGIVNITAGRPPWNGLISVSPEQGTTLKDEFQLRTYNWTDDASslPLSFGFVY--YLARGGSTYIRDTTRTPNATAFLPLGYKGFnNSELPVAALAKDVFGSVGTVNTSVRVLAPSLESA-----VASVINQTSAIEDLAESGDTSAAL 168
                 58899************************************************************999*********..99999999999999999999*******998799********************************.....888889999**********98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 945.47
//
Query:       MMETSP1325-20131115|2046_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 556.14
//
Query:       MMETSP1325-20131115|2043_1  [L=1088]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-10   39.6   0.2    1.1e-09   38.5   0.1    1.6  1  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
    1.9e-09   36.8   0.0    1.1e-07   31.0   0.0    2.2  2  PF01717.13 Cobalamin-independent synthase, Catalytic domain
    1.5e-06   28.0   0.6    1.5e-06   28.0   0.4    2.4  2  PF13450.1  NAD(P)-binding Rossmann-like domain
    4.3e-06   26.7   0.3      0.003   17.6   0.0    3.2  3  PF13241.1  Putative NAD(P)-binding
    1.7e-05   23.7   1.3    9.9e-05   21.2   0.1    2.6  2  PF01266.19 FAD dependent oxidoreductase
    1.8e-05   23.9   0.4    1.8e-05   23.9   0.3    1.9  2  PF12831.2  FAD dependent oxidoreductase
    1.9e-05   23.7   1.2    3.1e-05   23.0   0.8    1.3  1  PF01494.14 FAD binding domain
    4.3e-05   22.6   0.4    4.3e-05   22.6   0.2    2.1  2  PF01946.12 Thi4 family
    8.5e-05   21.4   0.2    0.00022   20.0   0.2    1.8  1  PF00890.19 FAD binding domain
     0.0019   17.9   0.1     0.0019   17.9   0.0    2.7  3  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.014   15.0   0.7      0.055   13.1   0.1    2.3  2  PF13454.1  FAD-NAD(P)-binding
      0.016   14.1   0.0      0.028   13.3   0.0    1.3  1  PF01593.19 Flavin containing amine oxidoreductase
      0.024   14.6   3.9        4.6    7.2   0.1    3.5  3  PF01488.15 Shikimate / quinate 5-dehydrogenase
      0.034   12.4   2.0      0.064   11.6   1.4    1.4  1  PF03486.9  HI0933-like protein
          1    9.6   8.7        0.5   10.6   0.6    3.1  2  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
        1.9    7.1   9.5      0.027   13.2   0.4    2.3  3  PF01134.17 Glucose inhibited division protein A


Domain annotation for each model (and alignments):
>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.1   1.3e-12   1.1e-09       1     200 [.     591     801 ..     591     804 .. 0.75

  Alignments for each domain:
  == domain 1    score: 38.5 bits;  conditional E-value: 1.3e-12
   PF13738.1   1 lVvGAGaaGlafadnlleegatpliivDrnakpGghwl.kaysfvrlhqpsffssdfgvndleklsldsspkwrikaelasgeeisayledvarrlglkvrlstrvteveregdrfevrvtdg.........revrakalvlatgavsk.pktlglpg.....sadkeavhleevlepe...dlkgkrvvVvGgghsAidallnLldlg.qkltwitrsp 200
                 +++GAG++G+ +a +l  +g++ ++i++++  +Gg w+ +a+s+ ++ + s  + ++ ++d   l  +   + r + +++ ++e++  l  + + l   v +  ++ +v   +++++v  +d            v a+ ++la+  +   p++l  p+      +++ +v  + + ++    +  gkrvv+ G g+ Ai+ ++  l+ g + +t++ r+ 
  MMETSP1325-20131115|2043_1 591 CIIGAGLCGMTAASKLVAAGVS-VAILEQRRLVGGIWSmYANSTSQVNS-S--EGGYCLKD---LLPEG--GVRDNRDHSPAAEVLTDLSALGDSLNEHVYTAVQCVKVLGSAGSYTVIANDLlepssgastNLVAARGVILAINDRVGlPRPLTAPKggrevFEEAGGVIADGIADSLtglSWVGKRVVIFGMGAFAIENVRTALESGaEMVTVVARRH 801
                 8*********************.**************933444433322.2..33444444...33333..35667899*************99976667677777777777889***999988899999988899********954334888888887776533345555554444322225667****************998888868899999985 PP

>> PF01717.13  Cobalamin-independent synthase, Catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.035        30      42      79 ..      22      60 ..      19      77 .. 0.87
   2 !   31.0   0.0   1.3e-10   1.1e-07     141     312 ..     162     354 ..     149     370 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.035
                HHHHHHHTT--SCBE---TT-SSTTTC--------.B-- CS
  PF01717.13 42 kavreqeelgvDvlvdgeaeRgdmveyfgealegf.akt 79
                +++ +q e+g+ v+ dge  R + +     ++eg+  kt
  MMETSP1325-20131115|2043_1 22 AVLTKQLEIGLSVINDGEWPRENYISELVSRIEGVsGKT 60
                68999********************99999999985554 PP

  == domain 2    score: 31.0 bits;  conditional E-value: 1.3e-10
                 TTS-HHHHHHHHHHHHHHHHHHHH------EEEE-TTST----SSG.GGHHHHHHHH..HHHHHHHH----TTS.-EEEEES-S--CCCH..........HHHHTT--SEEEES-SS.S-SSGGGGTT-.-.....------------TTSSS--THHHHHHHHHCHHCT.S-STS--B------TTS-HHHHH CS
  PF01717.13 141 edvdreelimqialalrkevkaLekagikviQiDEPalreglplkk.edwaayldwa..vaafrldtivaaldi.qvalHvCysefndil..........deisaldvdvltleaar.sdkealealee.a.....kyekkvglGvvdvhsprvpsveeikalikkvldv.alkdrLwvnPdCGlktrkreeai 312
                 ++ d+e+ +  +++al+ e +   + g++ iQ+D P l  g+ +   +  +a ++    ++ ++l+++ a++ + q+ +H C  ++                + +++ + + +eaa+ +++ ++ea+++ +     + ++ +++Gv+d+++ r++    + ++i +++++   + r+    dCG +  + ++a+
  MMETSP1325-20131115|2043_1 162 YYGDHEAYVSAMGEALKIEYETIAASGVQ-IQVDCPDLAMGRHTSFaHVTDAEFRKIaeANVKALNKALANVPVeQIRVHACWGNYAGPHhmdmaaedvwPIVGKIKTTYILMEAANpRHNADVEAFAQaVrdghfGRDQVIVPGVIDTTAARIEHPKVVSDRILRFVKAaGHPSRVIAGTDCGFASTAKSVAV 354
                 5668899999****************987.8*****8887777765334445554430145689999999998758******98885322223356666678899***********85667899999985422222356789***************************96678999999*****988877765 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.5       4.9   4.2e+03       4      22 ..     483     501 ..     480     502 .. 0.86
   2 !   28.0   0.4   1.8e-09   1.5e-06       1      40 [.     592     631 ..     592     644 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 4.9
   PF13450.1   4 aGlsGlvaAylLakagkdv 22 
                 +G++++vaA +L ka+ +v
  MMETSP1325-20131115|2043_1 483 TGAAAAVAADALLKADARV 501
                 59999****9999998877 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 1.8e-09
   PF13450.1   1 IvGaGlsGlvaAylLakagkdvlvlekrdrlGGraasvev 40 
                 I+GaGl G++aA  L  ag++v +le+r+ +GG ++ + +
  MMETSP1325-20131115|2043_1 592 IIGAGLCGMTAASKLVAAGVSVAILEQRRLVGGIWSMYAN 631
                 9********************************8887765 PP

>> PF13241.1  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       4.4   3.8e+03      16      33 ..     484     501 ..     472     569 .. 0.63
   2 ?    5.5   0.0     0.021        18       9      39 ..     589     619 ..     585     688 .. 0.89
   3 !   17.6   0.0   3.5e-06     0.003       7      49 ..     767     811 ..     763     848 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 4.4
                 -----HHHHHHTT---EE CS
   PF13241.1  16 GevAarkvrklleagakv 33 
                 G  Aa  + +ll+a+a+v
  MMETSP1325-20131115|2043_1 484 GAAAAVAADALLKADARV 501
                 344556677888888887 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.021
                 EEEEE-------HHHHHHTT---EEEEE-SS CS
   PF13241.1   9 kvlvvGgGevAarkvrklleagakvtvvspe 39 
                  v+++G+G  +++ + kl++ag +v ++ ++
  MMETSP1325-20131115|2043_1 589 DVCIIGAGLCGMTAASKLVAAGVSVAILEQR 619
                 69***********************998766 PP

  == domain 3    score: 17.6 bits;  conditional E-value: 3.5e-06
                 T-EEEEE-------HHHHHHTT---E.EEEE-SS-.-TT-T.... CS
   PF13241.1   7 gkkvlvvGgGevAarkvrklleagak.vtvvspei.keleelvkl 49 
                 gk+v+++G G  A + vr+ le+ga+ vtvv+ +  +++ + +++
  MMETSP1325-20131115|2043_1 767 GKRVVIFGMGAFAIENVRTALESGAEmVTVVARRHgTICPKAIDY 811
                 89**********************8758****9988777766663 PP

>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   1.2e-07   9.9e-05       1      35 [.     589     623 ..     589     662 .. 0.87
   2 ?   -0.1   0.1      0.35     3e+02     177     201 ..     890     915 ..     879     932 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.2e-07
                 EEEEE----HHHHHHHHHHHTT-EEEEEESSSTTS CS
  PF01266.19   1 dvviiGgGivGlstAyeLarrglkVtllekgdias 35 
                 dv+iiG+G  G ++A  L  +g++V++le++++ +
  MMETSP1325-20131115|2043_1 589 DVCIIGAGLCGMTAASKLVAAGVSVAILEQRRLVG 623
                 8******************************6554 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.35
                 TTCEE.EEEEES..EEEEEEEE---- CS
  PF01266.19 177 ggrvsgvetedgs.iradkvvlAaGa 201
                  ++v+gv+ +dg+ + ad+vv + G 
  MMETSP1325-20131115|2043_1 890 RDGVTGVTINDGTfLPADVVVGCIGF 915
                 578**********9999999999885 PP

>> PF12831.2  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   1.8       5.7   4.9e+03       3      19 ..     476     492 ..     475     501 .. 0.80
   2 !   23.9   0.3   2.1e-08   1.8e-05       1      44 [.     589     632 ..     589     659 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 5.7
   PF12831.2   3 vVvGGgpaGvaAAiaAa 19 
                 v +G g  G aAA+aA 
  MMETSP1325-20131115|2043_1 476 VLIGVGKTGAAAAVAAD 492
                 66888889999999984 PP

  == domain 2    score: 23.9 bits;  conditional E-value: 2.1e-08
   PF12831.2   1 DvvVvGGgpaGvaAAiaAarlGakvlLverrgvlGGmltsglva 44 
                 Dv+++G+g+ G++AA +   +G++v+++e+r+ +GG ++  + +
  MMETSP1325-20131115|2043_1 589 DVCIIGAGLCGMTAASKLVAAGVSVAILEQRRLVGGIWSMYANS 632
                 9************************************9976655 PP

>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.8   3.6e-08   3.1e-05       2      34 ..     588     620 ..     587     622 .. 0.95

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 3.6e-08
                 ECEEE--------HHHHHHHHH.HHEEEEESSS CS
  PF01494.14   2 tdVlIVGaGpaGlmlallLseaGvrvvlvekhs 34 
                 +dV+I+GaG++G+++a+ L  aGv+v ++e+++
  MMETSP1325-20131115|2043_1 588 VDVCIIGAGLCGMTAASKLVAAGVSVAILEQRR 620
                 89****************************985 PP

>> PF01946.12  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       2.4     2e+03       3      34 ..     458     489 ..     457     502 .. 0.71
   2 !   22.6   0.2   5.1e-08   4.3e-05      18      57 ..     588     626 ..     584     648 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2.4
                 HHHHHHHHHHHHHTEEEEEEE-------HHHH CS
  PF01946.12   3 aiveryfedllkyaesDvvivGaGssGltaay 34 
                 a+ +++f +l   +++ +v++G G +G +aa 
  MMETSP1325-20131115|2043_1 458 ALASKAFGELCFAVDAPLVLIGVGKTGAAAAV 489
                 56677888888889999999999999987764 PP

  == domain 2    score: 22.6 bits;  conditional E-value: 5.1e-08
                 EEEEEE-------HHHHHHHTSTS-EEEEESSS------- CS
  PF01946.12  18 sDvvivGaGssGltaayylakkdlkvailerklsiGGGaw 57 
                 +Dv i+GaG +G+taa  l  +++ vaile++  +G G+w
  MMETSP1325-20131115|2043_1 588 VDVCIIGAGLCGMTAASKLVAAGVSVAILEQRRLVG-GIW 626
                 7*****************************997665.677 PP

>> PF00890.19  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.2   2.6e-07   0.00022       1      37 [.     589     635 ..     589     685 .. 0.78

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.6e-07
                 SEEEE-------HHHHHHHCHTT-EEEE-SS-CCGS..........G CS
  PF00890.19   1 DvvViGsGlAGlaAAleaaeaglkvavvekeqetgg..........a 37 
                 Dv +iG+Gl G++AA ++  ag +va++e+   +gg          +
  MMETSP1325-20131115|2043_1 589 DVCIIGAGLCGMTAASKLVAAGVSVAILEQRRLVGGiwsmyanstsQ 635
                 999***************************99998875544444333 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.4       4.3   3.7e+03       2      25 ..     475     501 ..     474     503 .. 0.79
   2 !   17.9   0.0   2.2e-06    0.0019       1      53 [.     589     637 ..     589     719 .. 0.84
   3 ?    0.4   0.0      0.54   4.6e+02       1      36 [.     769     806 ..     766     921 .. 0.72

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 4.3
                 EEEE----HHHHHHHHHH...HTTSEE CS
                 xxxxxxxxxxxxxxxxxx...xxxxxx RF
   PF07992.9   2 vviiGgGpaGlsaakdla...qkglkv 25 
                 +v iG G  G +aa  ++   +++++v
  MMETSP1325-20131115|2043_1 475 LVLIGVGKTGAAAAVAADallKADARV 501
                 688999999999999988666666666 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 2.2e-06
                 SEEEE----HHHHHHHHHHHTTSEEEEECSSSSSTBTSGGHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9   1 dvviiGgGpaGlsaakdlaqkglkvaliekeggtcvnrgclpkkllvevaegr 53 
                 dv+iiG+G  G++aa +l  +g+ va++e+       +g++++ ++  ++++ 
  MMETSP1325-20131115|2043_1 589 DVCIIGAGLCGMTAASKLVAAGVSVAILEQRR----LVGGIWSMYANSTSQVN 637
                 79**************************7766....78888887776666655 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.54
                 SEEEE----HHHHHHHHHHHTTSEEEEE..CSSSSSTB CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxx RF
   PF07992.9   1 dvviiGgGpaGlsaakdlaqkglkvali..ekeggtcv 36 
                 +vvi G G+ +++ ++++  +g++ + +   + g +c 
  MMETSP1325-20131115|2043_1 769 RVVIFGMGAFAIENVRTALESGAEMVTVvaRRHGTICP 806
                 69999999999999999999999966665633333333 PP

>> PF13454.1  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   6.4e-05     0.055       1      54 [.     591     638 ..     591     643 .. 0.89
   2 ?   -1.4   0.0       1.9   1.6e+03     134     155 ..     894     915 ..     881     916 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.4e-05
   PF13454.1   1 aIiGaGprGlsvlerLlarakkekpleitvfdpspagaggvwrtdqseelllNt 54 
                 +IiGaG +G++++ +L+a       +++ + +++ +  gg+w+ +++++  +N+
  MMETSP1325-20131115|2043_1 591 CIIGAGLCGMTAASKLVAA-----GVSVAILEQRRLV-GGIWSMYANSTSQVNS 638
                 59****************9.....5*********998.9***999887777766 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 1.9
   PF13454.1 134 qtvlladgesleadaVvlAtGh 155
                   v+ +dg+ l ad Vv ++G 
  MMETSP1325-20131115|2043_1 894 TGVTINDGTFLPADVVVGCIGF 915
                 358889*************995 PP

>> PF01593.19  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.3e-05     0.028       1      28 [.     597     624 ..     597     638 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.3e-05
                 ----HHHHHHHH---EEEEEESSS---- CS
  PF01593.19   1 laGLaAArqLlqaGfdVtvlEArdrvGG 28 
                 l G++AA++L  aG++V +lE r  vGG
  MMETSP1325-20131115|2043_1 597 LCGMTAASKLVAAGVSVAILEQRRLVGG 624
                 57*************************9 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.15   1.3e+02       4      30 ..     461     490 ..     458     530 .. 0.64
   2 ?    7.2   0.1    0.0054       4.6      13      41 ..     588     615 ..     582     619 .. 0.87
   3 ?    3.9   0.1     0.057        49       9      45 ..     764     800 ..     756     804 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.15
                 HH--.......--EEEEE----HHHHHGGG CS
  PF01488.15   4 kkkle..slk.gkkvlviGAGemarlvakh 30 
                 +k ++   ++ +++ ++iG G+++ ++a +
  MMETSP1325-20131115|2043_1 461 SKAFGelCFAvDAPLVLIGVGKTGAAAAVA 490
                 555553333458999*******99887643 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0054
                 -EEEEE----HHHHHGGG--TTT-E.EEE CS
  PF01488.15  13 kkvlviGAGemarlvakhLlekgvkkivi 41 
                   v++iGAG  + ++a+ L++ gv+ + i
  MMETSP1325-20131115|2043_1 588 VDVCIIGAGLCGMTAASKLVAAGVS-VAI 615
                 679********************99.655 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.057
                 ...--EEEEE----HHHHHGGG--TTT-E.EEE---- CS
  PF01488.15   9 slkgkkvlviGAGemarlvakhLlekgvkkiviaNRt 45 
                 s+ gk+v++ G G  a + +++ le+g++ ++++ R 
  MMETSP1325-20131115|2043_1 764 SWVGKRVVIFGMGAFAIENVRTALESGAEMVTVVARR 800
                 5679******************************996 PP

>> PF03486.9  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.4   7.4e-05     0.064       2      36 ..     589     623 ..     588     624 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.4e-05
   PF03486.9   2 dviviGgGaAGlmaAisaakrgakVllldkakklg 36 
                 dv +iG+G  G+ aA ++ ++g +V++l++ + +g
  MMETSP1325-20131115|2043_1 589 DVCIIGAGLCGMTAASKLVAAGVSVAILEQRRLVG 623
                 89***************************987665 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.6   0.00059       0.5       2      31 ..     590     619 ..     589     626 .. 0.92
   2 ?    3.0   0.1      0.14   1.2e+02       1      32 [.     769     801 ..     769     810 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00059
                 EEEE---HHHHHHHHHHHHTTSEEEEEESS CS
  PF00070.22   2 vvvvGGGyiGlElAaalaklgkkVtvierr 31 
                 v+++G+G+ G+ +A+ l + g +V ++e r
  MMETSP1325-20131115|2043_1 590 VCIIGAGLCGMTAASKLVAAGVSVAILEQR 619
                 79************************9987 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.14
                 EEEEE---HHHHHHHHHHHHTTS.EEEEEESSS CS
  PF00070.22   1 rvvvvGGGyiGlElAaalaklgk.kVtvierrd 32 
                 rvv+ G G  ++E   ++ + g+  Vtv+ rr 
  MMETSP1325-20131115|2043_1 769 RVVIFGMGAFAIENVRTALESGAeMVTVVARRH 801
                 79***************9999972579999985 PP

>> PF01134.17  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.8       3.6     3e+03       2      18 ..     475     491 ..     474     497 .. 0.87
   2 ?   13.2   0.4   3.2e-05     0.027       1      30 [.     589     618 ..     589     639 .. 0.85
   3 ?   -1.0   0.0      0.65   5.6e+02     117     162 ..     883     923 ..     876     948 .. 0.71

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 3.6
                 EEEE-------HHHHHH CS
  PF01134.17   2 viViGgGhAGceAAlaa 18 
                 ++ iG G  G +AA+aa
  MMETSP1325-20131115|2043_1 475 LVLIGVGKTGAAAAVAA 491
                 578***********998 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 3.2e-05
                 SEEEE-------HHHHHHHH----EEEEES CS
  PF01134.17   1 dviViGgGhAGceAAlaaarlGakvlLith 30 
                 dv +iG+G+ G+ AA ++  +G++v+++ +
  MMETSP1325-20131115|2043_1 589 DVCIIGAGLCGMTAASKLVAAGVSVAILEQ 618
                 79************************9943 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.65
                 -EEE--BSSSBB---EE----B-EESEEEE-----B---EE----E CS
  PF01134.17 117 eveeliveekkvkgvvtedgetikakavviatGtflkgkihigeke 162
                 +++el v  + v+gv+ +dg+ + a++vv   G f +g+  +   e
  MMETSP1325-20131115|2043_1 883 TIDELGV-RDGVTGVTINDGTFLPADVVVGCIG-FTRGTYLC---E 923
                 5667766.6889**************9997777.36666655...3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1088 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 1.63u 0.42s 00:00:02.04 Elapsed: 00:00:00.93
# Mc/sec: 2803.48
//
Query:       MMETSP1325-20131115|2047_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 948.35
//
Query:       MMETSP1325-20131115|2048_1  [L=544]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-77  259.2   0.0    4.2e-77  258.8   0.0    1.1  1  PF08003.6 Protein of unknown function (DUF1698)
    1.2e-17   63.9   0.0      5e-13   48.9   0.0    2.4  2  PF13489.1 Methyltransferase domain
    8.3e-10   38.9   0.0    1.5e-08   34.9   0.0    2.6  2  PF08241.7 Methyltransferase domain
    1.1e-08   34.7   0.0    5.4e-08   32.4   0.0    2.1  2  PF13847.1 Methyltransferase domain
    2.3e-08   34.2   0.0      1e-07   32.1   0.0    2.1  2  PF08242.7 Methyltransferase domain
    5.4e-08   33.2   0.0    1.3e-06   28.8   0.0    2.5  2  PF12847.2 Methyltransferase domain
     0.0012   18.7   0.1       0.19   11.6   0.0    3.0  2  PF13659.1 Methyltransferase domain
  ------ inclusion threshold ------
      0.045   13.3   0.0      0.083   12.4   0.0    1.3  1  PF11340.3 Protein of unknown function (DUF3142)
      0.073   11.8   0.0       0.11   11.1   0.0    1.3  1  PF05219.7 DREV methyltransferase


Domain annotation for each model (and alignments):
>> PF08003.6  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.8   0.0   2.8e-80   4.2e-77      30     306 ..     261     544 .]     245     544 .] 0.89

  Alignments for each domain:
  == domain 1    score: 258.8 bits;  conditional E-value: 2.8e-80
   PF08003.6  30 gdlkrwakaleklpelkp...dsi.dlkdsvtiekeeqlsegekkklekllralmPWrkGPfslfGvdidteWrsdwkWdrvlphlsdlkgrtildvGcgnGyhlwrmvgegaklvvGidPselfliqfeavrkllgedqrahllplgieqlpeleafdtvfsmGvlyhrrsPldhllqlkdqlvkgGelvletlvie..G..denavlvPedryakmrnvyfiPsaaalkvWlekvgfvdvrivdesvttleeqrkteWleteslkdfldpedpsktveGypaP 306
                  +++r++ a   l +l++   d++   + +++i   ++l +ge + +e++l++l+PW+kGP +lfGv+idteWrsdwkWdr++p ++dl++++++dvGc+nGy+++rm+ + ++lvvGidP+   ++ f+  +++    + + ++ l   +l    +fd+vf +Gvlyh   P+  l+ l ++++ + +l+++ + i+  G  d+  +l+P+  yak ++++++P+ aal++Wle+ +f d++ + +++ ++eeqr+t++ +  sl++ ld++d++ktveGypaP
  MMETSP1325-20131115|2048_1 261 HQFHRYEAAAALLLQLEArrtDRVvTATPTLSIGDRSELDDGEFAVFEEMLQQLHPWKKGPLELFGVEIDTEWRSDWKWDRIQPFVTDLRDKVVADVGCANGYFMFRMLEQSPRLVVGIDPNIKAWLEFQVFQRYAQRPELQLEV-LDGGELHFPLTFDVVFCLGVLYHTPDPIGMLRVLWKSMKPKAQLIVDCQGIPvqGaeDNPVALIPRRAYAKGNGMWWLPTPAALRIWLERSNFRDIEFFYSEKLSTEEQRSTKFANIPSLAEALDKDDETKTVEGYPAP 544
                 56777776655554444400044314455699999*****************************************************************************************************888888877.77778888889*************************************99863344366789****************************************************************************9 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   4.3e-05     0.066      78     161 ..      68     187 ..      11     188 .. 0.69
   2 !   48.9   0.0   3.3e-16     5e-13      11     161 ..     340     502 ..     330     503 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.3e-05
   PF13489.1  78 g.......kfdlivarevlehvp..dpeellrqiaellkpgGylllstpnas.................lasdeafak..................wdylvprgthisffsaeslkelleeaGfeive 161
                 +        + +++  + + +vp  + + l++++++ l pgG+l+ ++  +s                         +                     + ++ +  s +++++++el+ +aGf+ +e
  MMETSP1325-20131115|2048_1  68 DvrglavdNASVVITEHIFDNVPahHRATLVSTLFKGLLPGGVLIMTENVRSahphfesmqrrvggvgnG-------DadtaaaaagvgftvhgdaGESELQD-DEFSPWTESQINELFWKAGFDFYE 187
                 1555555577899999999999954466899***************998887755555555555555551.......04444445566665333322233433.889*****************8765 PP

  == domain 2    score: 48.9 bits;  conditional E-value: 3.3e-16
   PF13489.1  11 dllerllarlkpggrvLDiGcGtGillell.aengfdvtgvDpspaaigk.akqaqksqfdeedaaepag.................kfdlivarevlehvpdpeellrqiaellkpgGylllstpnas..lasdeafak...wdylvprgthisffsaeslkelleeaGfeive 161
                 d ++++++ + +++ v D+Gc +G+++  + ++++  v+g+Dp+    ++   +++++ + ++      +                 +fd++ +  vl+h pdp  +lr +++ +kp   l++  +  +   a+d+  a      y+  + +  ++ ++++l+ +le+++f+++e
  MMETSP1325-20131115|2048_1 340 DRIQPFVT-DLRDKVVADVGCANGYFMFRMlEQSPRLVVGIDPNI---KAwLEFQVFQRY-AQ------RpelqlevldggelhfplTFDVVFCLGVLYHTPDPIGMLRVLWKSMKPKAQLIVDCQGIPvqGAEDNPVALiprRAYAKGN-GMWWLPTPAALRIWLERSNFRDIE 502
                 55566664.67899**********776666155555689****53...333333333333.22......122233445559999999**************************************9887442244444441113444442.556666**************9875 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.37   5.6e+02      54      95 .]      72     113 ..      43     113 .. 0.75
   2 !   34.9   0.0   9.8e-12   1.5e-08       2      94 ..     356     450 ..     355     451 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.37
   PF08241.7  54 lpfednsfDvvvssevlehl..edpekalkeiaRvLkpgGllvi 95 
                 l ++++s  vv+  + +  +  + ++ +++ + + L pgG+l++
  MMETSP1325-20131115|2048_1  72 LAVDNAS--VVITEHIFDNVpaHHRATLVSTLFKGLLPGGVLIM 113
                 5444433..69999999999888888999999999999999985 PP

  == domain 2    score: 34.9 bits;  conditional E-value: 9.8e-12
   PF08241.7   2 dvGcGtglllealaerpaarvtgvDlsee...mlatakerlkeeglelvvadaeelpfednsfDvvvssevlehledpekalkeiaRvLkpgGllv 94 
                 dvGc +g+++  + e++++ v+g+D++ +     ++ ++ +++ +l+l v d  el+f+  +fDvv++  vl h +dp  +l+ + + +kp   l+
  MMETSP1325-20131115|2048_1 356 DVGCANGYFMFRMLEQSPRLVVGIDPNIKawlEFQVFQRYAQRPELQLEVLDGGELHFP-LTFDVVFCLGVLYHTPDPIGMLRVLWKSMKPKAQLI 450
                 9**************************99655566888888888888***********8.9******************************98887 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.92   1.4e+03      94     112 ..      99     117 ..      57     169 .. 0.72
   2 !   32.4   0.0   3.6e-11   5.4e-08       4     110 ..     351     453 ..     348     482 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.92
   PF13847.1  94 keiervlkpggrlivesps 112
                   +++ l pgg+li+++ +
  MMETSP1325-20131115|2048_1  99 STLFKGLLPGGVLIMTENV 117
                 3566678888998888877 PP

  == domain 2    score: 32.4 bits;  conditional E-value: 3.6e-11
   PF13847.1   4 gikvlDlGCGtGylllelaeelgpgak.vvGiDiseea.ielAkeraqklgfenveFiqgdieeleklleesfDlvisnevlnaladpqkvlkeiervlkpggrlives 110
                 +++v D+GC++Gy+ +++ e+  +  + vvGiD + +a +e+    +  +   +++ ++ d  el   ++ +fD+v++ +vl++ +dp  +l+ + + +kp+  liv+ 
  MMETSP1325-20131115|2048_1 351 DKVVADVGCANGYFMFRMLEQ--SP-RlVVGIDPNIKAwLEFQVFQRYAQRP-ELQLEVLDGGELH--FPLTFDVVFCLGVLYHTPDPIGMLRVLWKSMKPKAQLIVDC 453
                 6789***************53..22.35*****9988735544444333333.5778888888877..8899******************************9999765 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.7   2.5e+03      65      99 .]      75     111 ..      34     111 .. 0.67
   2 !   32.1   0.0   6.9e-11     1e-07       2      99 .]     356     449 ..     355     449 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.7
   PF08242.7  65 ssfDvvvasnvlhhl..kdirevldnirklLkpgGvl 99 
                 +   vv+  + + ++   ++  +++ + k L pgGvl
  MMETSP1325-20131115|2048_1  75 DNASVVITEHIFDNVpaHHRATLVSTLFKGLLPGGVL 111
                 3555677777777777555667777888888888876 PP

  == domain 2    score: 32.1 bits;  conditional E-value: 6.9e-11
   PF08242.7   2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirevldnirklLkpgGvl 99 
                 ++Gc +G +++++le+ +   ++g+D++ +a     e    ++  +  +++le+ld ++l+ + +fDvv++++vl h++d+  +l+ + k +kp ++l
  MMETSP1325-20131115|2048_1 356 DVGCANGYFMFRMLEQ-SPRLVVGIDPNIKAW---LEFQVFQRYAQRPELQLEVLDGGELHFPLTFDVVFCLGVLYHTPDPIGMLRVLWKSMKPKAQL 449
                 8***************.555577*****9999...44444444456679999999999999999******************************9986 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.24   3.6e+02      73     111 ..      79     115 ..      37     116 .. 0.71
   2 !   28.8   0.0   8.5e-10   1.3e-06       3     109 ..     352     451 ..     350     453 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.24
   PF12847.2  73 avllkgltldallaldeprrvlealpkllkpggrlvies 111
                 +v+  +  +d+++a+  +  +++ l k l pgg+l++++
  MMETSP1325-20131115|2048_1  79 VVITEH-IFDNVPAH-HRATLVSTLFKGLLPGGVLIMTE 115
                 444444.55555555.56666888999999*****9986 PP

  == domain 2    score: 28.8 bits;  conditional E-value: 8.5e-10
   PF12847.2   3 krilDlGcGtGslslelarlrpgak.vvgvDpseeslelarenaksldleeriellqgdakeelsllerfDavllkgltldallaldeprrvlealpkllkpggrlvi 109
                 k + D+Gc +G++ + +++  +  + vvg+Dp+ ++   ++    + +++++++l   d   el +   fD+v++ g+    l++ ++p  +l+ l+k +kp+  l++
  MMETSP1325-20131115|2048_1 352 KVVADVGCANGYFMFRMLE--QSPRlVVGIDPNIKAWLEFQVFQ-RYAQRPELQLEVLDG-GELHFPLTFDVVFCLGV----LYHTPDPIGMLRVLWKSMKPKAQLIV 451
                 5679***************..55555******877665555222.344666666666666.55899999******992....4445899999************9998 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.037        57      48     106 ..     148     315 ..      43     317 .. 0.49
   2 !   11.6   0.0   0.00013      0.19       2      75 ..     352     421 ..     351     447 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.037
   PF13659.1  48 l...............................................................................................................aervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrdlydafleaaarllk 106
                 +                                                                                                                ++++  ++ ++ l  +l a++ d vvt  P   + g+r +l+d   a++e+++++l 
  MMETSP1325-20131115|2048_1 148 VgftvhgdageselqddefspwtesqinelfwkagfdfyesvsksggvatvvamkrdskkkpkatpskspaasessmvklffdgspayietimtpgerarlrekrmeffgslLHQFHRYEAAAALLL-QLEARRTDRVVTATPTL-SIGDRSELDDGEFAVFEEMLQQLH 315
                 0444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444233333333333333.58888888888888888.688888888877777777777765 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00013
   PF13659.1   2 drvldpgcGsGtfllaalellaalllgvEldpraaalaa.rnlaraglaervrvrqgdlrdlaellragsfdlvv 75 
                  +v d+gc +G+f++ +le+ + l++g++ + +a  + + + ++r++  +++++ + d  +l+  + +  fd+v+
  MMETSP1325-20131115|2048_1 352 KVVADVGCANGYFMFRMLEQSPRLVVGIDPNIKA--WLEfQVFQRYAQRPELQLEVLDGGELH--F-PLTFDVVF 421
                 589**************************99998..444255777766667777777777777..3.34577766 PP

>> PF11340.3  Protein of unknown function (DUF3142)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.5e-05     0.083      24      71 ..     305     353 ..     293     358 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.5e-05
   PF11340.3  24 evlqkllqllakwqakgtevagieIDfDaass.rldaYaafLrkLrqkL 71 
                 +v++++lq+l+ w++ ++e+ g+eID   +s  + d+ + f ++Lr+k 
  MMETSP1325-20131115|2048_1 305 AVFEEMLQQLHPWKKGPLELFGVEIDTEWRSDwKWDRIQPFVTDLRDKV 353
                 68899**********************9998648999999999999886 PP

>> PF05219.7  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.5e-05      0.11     138     233 ..     404     498 ..     343     506 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 7.5e-05
   PF05219.7 138 nvlsalelqetdvkldlilclnlldrcfdplklledirsalepngrvivalv.lPvshyvetntgksekpsellevkGrsyeeevarlievlkkagf 233
                 +vl   el    + +d++ cl +l    dp+ +l+ +++ ++p+++ iv    +Pv+   e n+    + + + + +G  +    a l   l++++f
  MMETSP1325-20131115|2048_1 404 EVLDGGELH-FPLTFDVVFCLGVLYHTPDPIGMLRVLWKSMKPKAQLIVDCQgIPVQ-GAEDNPVALIPRRAYAKGNGMWWLPTPAALRIWLERSNF 498
                 555555555.6689*********************************9975425654.456666666666666666666666555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.70
# Mc/sec: 1862.31
//
Query:       MMETSP1325-20131115|2045_1  [L=391]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-13   47.7   0.1    9.8e-13   47.1   0.1    1.2  1  PF00501.23 AMP-binding enzyme
    1.1e-07   30.9   0.0    2.2e-07   30.0   0.0    1.5  1  PF13193.1  Domain of unknown function (DUF4009)
  ------ inclusion threshold ------
      0.024   14.7   0.1       0.04   14.0   0.1    1.4  1  PF00550.20 Phosphopantetheine attachment site


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.1   2.2e-16   9.8e-13     267     418 .]      54     215 ..      47     215 .. 0.76

  Alignments for each domain:
  == domain 1    score: 47.1 bits;  conditional E-value: 2.2e-16
                 THHHHHHHHHHTT.SEEEEEE--CGGSSESEECCS-HHH.CCH---EBSTTTEEEEEBSTT..-BEE-S----EEEES..TTS--B-TT-HHHHHHHBCCSTT...........EEE---EEEE-TT--EEEE--GGGEEE----EEEHHHHHHHHH..TSTTEEEEEE CS
  PF00501.23 267 spellerlreafggirivngYGltEttgvvtvslpgdeetkpgsiGrplpgvevkivdeeg..kevppgevGEllirg..pgvakGYlkdpeltaeafdedgw...........lyrTGDlgrldedGyleiiGRkkdqikirGeniepgeiEsall..ehpgvaeaaV 418
                   e+++ ++++  +  +vn Y+ tE++g+v  ++ + ++       r +p+ +   + + +      +g  GE +i++  p   +  ++d ++ a+  ++ +             +  GD +++++dG++++ GR++d+++++G ++  ++iE+all      v++a+V
  MMETSP1325-20131115|2045_1  54 VNEVVHAFAQRYLCRDFVNSYWGTEHGGIVWSMTADRPD-------RRVPNAHTACLPWIDgdVDASVGSAGETVIASpfPYQGRTVWGDAARAAAPGWSGDAtawaryfdvqgRFVQGDSAVRHADGTYTFHGRSDDVMNVGGNRVGIEPIENALLkaLYGRVRNAVV 215
                 45677777777779****************999999996.......333333333333333124455788899999998878888888887665555444444888888888888*****************************************9555566777766 PP

>> PF13193.1  Domain of unknown function (DUF4009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   4.7e-11   2.2e-07       1      33 [.     261     293 ..     261     304 .. 0.89

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 4.7e-11
   PF13193.1   1 ykvPreveFVdeLPKTrSGKIlRRlLRaialge 33 
                 ++vPr +++Vde+P T SGK  R lL+a+++g 
  MMETSP1325-20131115|2045_1 261 FAVPRAIVCVDEIPVTLSGKYPRGLLKALYDGF 293
                 79****************************984 PP

>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   8.7e-06      0.04       3      37 ..     356     389 ..     354     391 .] 0.89

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 8.7e-06
  PF00550.20   3 lleivaevlgldpdeidldtdlfe.lGlDSllavel 37 
                  ++++ e+lg   + +dld+  +e  G+DSl+ ++l
  MMETSP1325-20131115|2045_1 356 MRALWIELLGF--ERVDLDDQWSElSGFDSLATMQL 389
                 6899*****94..569********9*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.37s 00:00:01.05 Elapsed: 00:00:00.60
# Mc/sec: 1561.63
//
Query:       MMETSP1325-20131115|2049_1  [L=344]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-72  243.2   1.8    3.4e-72  242.8   1.3    1.2  1  PF00224.16 Pyruvate kinase, barrel domain
    6.7e-22   77.1   0.0    1.3e-21   76.2   0.0    1.5  1  PF02887.11 Pyruvate kinase, alpha/beta domain
  ------ inclusion threshold ------
      0.013   14.2   0.5      0.089   11.5   0.0    2.1  2  PF03328.9  HpcH/HpaI aldolase/citrate lyase family


Domain annotation for each model (and alignments):
>> PF00224.16  Pyruvate kinase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.8   1.3   7.5e-76   3.4e-72     137     340 ..       3     204 ..       1     211 [. 0.95

  Alignments for each domain:
  == domain 1    score: 242.8 bits;  conditional E-value: 7.5e-76
                 EEE----E.EEEEEEE---B------B---------SS-HHHHHHHH---TT.--SEEEETTE-SHHHHHHHHHH-------SEEEEEE-S----TTHHHHHHH----EEE-------S-CCCHHHHHHHH---TTT-----EEESSTTGGGGTSSS--CHHHHHHHHHHH----EEEE---------HHHHHHHHHHHHHHHHH CS
  PF00224.16 137 vlevddekelkvevenegvlssrkgvnlpgtkvdlpalsekDkadlkfgvkq.gvdliaasfvRkaedvkevRevleekgkeikiiakienqegvenldeileasdgimvaRGDlGieipaekvvlaqkllikkcnlagkpvitatqmlesmiknPrptRaevsDvanavldGaDavmLsgetakGkyPveavkamaevaleaek 340
                 v e+ d+  +++ev n++ +ssrkg nlp+t vd  a++ kD +dl+f +k+ + d +a+sfv k ed+ ++R++++++    k++akie+  +++nl +i  + dgimvaRGDlG+e+  e+v+++qk +i  c+  gkpvi+atqmlesm+ nP+ptRae sD+a a++dGaDavmLsge+a+GkyPve+v+++++v  + e+
  MMETSP1325-20131115|2049_1   3 VREKGDDY-VVTEVMNDAAISSRKGFNLPDTYVDGAAMTPKDIKDLEFCLKNiDFDWVALSFVQKQEDILQLRDMMGDHK--GKVLAKIEKPSAMDNLKSITDVCDGIMVARGDLGVEMQPEDVPMLQKEIIDECRSQGKPVIVATQMLESMMDNPAPTRAECSDIATAIFDGADAVMLSGESAAGKYPVESVAMQQKVISRVEN 204
                 44555555.9*****************************************988**********************9875..578*****************************************************************************************************************9988876 PP

>> PF02887.11  Pyruvate kinase, alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.2   0.0   2.8e-25   1.3e-21       2     117 .]     224     338 ..     223     338 .. 0.92

  Alignments for each domain:
  == domain 1    score: 76.2 bits;  conditional E-value: 2.8e-25
                 HHHHHHHHHHHHHHT-SEEEEE-----HHHHHHHT--SSEEEEEES-HHHHH--TEEE--ETTE-SHHCHCHHHHHHHHHHHHHHTTS--SSSEEEEEE-.----------EEEEEE CS
  PF02887.11   2 eaiaeaaveaAkelgakaIvvltesGstarlvskyrpgvpIlavtpseetarqlalvwGvhplvgkeraistdeviaealraalkkglikkgdevvvtag.lpfgtaggtntikvvr 117
                 +a + +a ++A+ l+ ka vv+++sG +++++ ++rpg+pI+a+tp+e+t r lal   v+p+ ++ +++s + + +e+ + a+  g++ +++e vv+a   pfg    +ntikv++
  MMETSP1325-20131115|2049_1 224 DAAMASATTLAQALKSKAFVVVSKSGASVNRATRMRPGIPIIAITPNESTNRALALQKHVYPVTLDPTKFSSQGLYSEIWDLAKSYGFVTDDKETVVLAMsEPFGL--PANTIKVIT 338
                 68889***********************************************************************************877776666655267777..78****985 PP

>> PF03328.9  HpcH/HpaI aldolase/citrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     2e-05     0.089      86     162 ..      57     122 ..      37     156 .. 0.75
   2 ?    0.6   0.0     0.044     2e+02      15      33 ..     166     184 ..     160     203 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2e-05
                 -EEEESS--SHHHHHHHHHHTSHTT-----CHHH-EEEEB--SHHHHHTHHHHHTSTTEEEEB---HHHHHH---TS CS
   PF03328.9  86 qgvlvPkvetaeevrevvkilrypekgirganketcllaqiESaegvknadeIaavegldgvalGaeDlsadlglkr 162
                 + v + +v+ +e++ ++  ++  +         + ++la iE   +++n+++I +v   dg++++  Dl +++  ++
  MMETSP1325-20131115|2049_1  57 DWVALSFVQKQEDILQLRDMMGDH---------KGKVLAKIEKPSAMDNLKSITDV--CDGIMVARGDLGVEMQPED 122
                 555555555555555555555555.........5689****************866..79*********99997655 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.044
                 HHHHCG--SEEEEESSTSS CS
   PF03328.9  15 ekaaiagaDsvliDlEdav 33 
                  +a + gaD+v++ +E a 
  MMETSP1325-20131115|2049_1 166 ATAIFDGADAVMLSGESAA 184
                 5677889********9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.36s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 1616.37
//
Query:       MMETSP1325-20131115|2050_1  [L=348]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   12.5   0.0       0.21   11.3   0.0    1.7  1  PF04711.8 Apolipoprotein A-II (ApoA-II)


Domain annotation for each model (and alignments):
>> PF04711.8  Apolipoprotein A-II (ApoA-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.6e-05      0.21      30      50 ..       3      23 ..       1      55 [. 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.6e-05
   PF04711.8 30 kaselqaqakayfektqeqLt 50
                  +e+  qakayf ++ e  t
  MMETSP1325-20131115|2050_1  3 AHTEISDQAKAYFSQSPESHT 23
                568***********9998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1667.86
//
Query:       MMETSP1325-20131115|2051_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.2e-09   36.9   1.9    9.7e-06   25.2   0.1    3.0  3  PF11901.3 Protein of unknown function (DUF3421)


Domain annotation for each model (and alignments):
>> PF11901.3  Protein of unknown function (DUF3421)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   7.1e-10   9.7e-06      47     114 ..      34     112 ..      27     115 .. 0.78
   2 !   16.7   0.2     3e-07    0.0041      24      99 ..      93     181 ..      92     202 .. 0.75
   3 !    2.2   0.1    0.0092   1.3e+02      32      55 ..     190     213 ..     174     214 .] 0.84

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 7.1e-10
   PF11901.3  47 eyevLcgtele....yeWvp...ssngsvpknAveaGkted.geplyigrgkyegs.ltvGk..vhpshkclyipygge 114
                 +ye ++++  +    +eWv      +++ p+++v+aG++++  e+lyi+r  ++++  ++Gk   ++s++c+ ++++g+
  MMETSP1325-20131115|2051_1  34 QYEYVNDYTEDtcgkVEWVAieaDAHTDSPQKSVVAGYDRNiKENLYICRLTVDDGwRVPGKtwFERSDSCCNVGHEGT 112
                 56666665555566778875222668999*********99989*********98652789**66689*********996 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 3e-07
   PF11901.3  24 pakvvps..kkkayvpyggkeiekteyevLcgtele.....yeWvp.....ssngsvpknAveaGktedgeplyigrgkye.gsltvGk 99 
                 p+k++ +  ++++ v ++g++   +++evL+ +        + W       + n  vp++A++ G++e + +l+ +r + e g +t G 
  MMETSP1325-20131115|2051_1  93 PGKTWFErsDSCCNVGHEGTASFGKSCEVLTVSPRAhsgskLAWTAidgtaKANQLVPNGALKLGNDEINGNLFSCRFRDEnGDYTNGN 181
                 77776554489*******************87665558889999752222266778999******************975414555555 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.0092
   PF11901.3  32 kkayvpyggkeiekteyevLcgte 55 
                 +++   yg   ++ + +evL +++
  MMETSP1325-20131115|2051_1 190 SCCTAEYGSGVVKSDACEVLIEKR 213
                 689999999999999*****9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 1005.53
//
Query:       MMETSP1325-20131115|2053_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.31    9.7   5.7       0.34    9.5   4.0    1.0  1  PF10351.4  Golgi-body localisation protein domain
       0.63    8.1   7.6       0.66    8.0   5.2    1.0  1  PF09726.4  Transmembrane protein
       0.85    9.0  11.3       0.92    8.9   7.8    1.0  1  PF06682.7  Protein of unknown function (DUF1183)
        3.7    5.1  16.6        3.5    5.2  11.5    1.0  1  PF05110.8  AF-4 proto-oncoprotein
        3.8    6.3   7.7          4    6.2   5.4    1.1  1  PF00242.12 DNA polymerase (viral) N-terminal domain


Domain annotation for each model (and alignments):
>> PF10351.4  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.0   0.00013      0.34     304     354 ..      58     116 ..      27     122 .. 0.55

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00013
   PF10351.4 304 s........edsdsqdeeeesasslsstsgskrskdssesrsssssssksslssqssks 354
                 +        ++s+++ + +++++s+ss +++++s++ss+s+ss +++s+ s+ss++s+s
  MMETSP1325-20131115|2053_1  58 AargagyftNTSQDDYGVSDTTTSVSSNTSTSSSSSSSRSSSSGDDDSQASSSSGHSSS 116
                 05555555455666666666666666666666666664444444444444444444433 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.2   0.00024      0.66     333     387 ..      61     115 ..      25     124 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00024
   PF09726.4 333 eeksakskssksaktskrsksnsspkshksaagsvssssvkkneskdkkasksss 387
                  ++  +  s +    s++++s ss  s +s+++s++sss+ +++s+   +s +ss
  MMETSP1325-20131115|2053_1  61 GAGYFTNTSQDDYGVSDTTTSVSSNTSTSSSSSSSRSSSSGDDDSQASSSSGHSS 115
                 3444344444444455666666666666666666666666666665555444333 PP

>> PF06682.7  Protein of unknown function (DUF1183)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   7.8   0.00034      0.92     248     317 ..      47     115 ..      10     121 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00034
   PF06682.7 248 eqgwrpGfWtGlaaGallGYllGsrraa..nrqyeesyssewgsasssrssssnssssssssstrtssgfgg 317
                    ++   W G+a Ga  GY+    + +   + +++s+ss  +s+sss+sss++sss+   s+ ++ssg+++
  MMETSP1325-20131115|2053_1  47 PMLQHDMTWHGAARGA--GYFTNTSQDDygVSDTTTSVSS-NTSTSSSSSSSRSSSSGDDDSQASSSSGHSS 115
                 44445678******96..**98887765553333333333.3444444444444444445555666666655 PP

>> PF05110.8  AF-4 proto-oncoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  11.5    0.0013       3.5     428     464 ..      79     115 ..      29     121 .. 0.67

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0013
   PF05110.8 428 skpepaasasdsSsSeSeSeSsSgSDSesESSssdSE 464
                 + + +++ + +sSsS+S S Ss + DS++ SSs  S 
  MMETSP1325-20131115|2053_1  79 TTSVSSNTSTSSSSSSSRSSSSGDDDSQASSSSGHSS 115
                 3333444444444455555555555555555555443 PP

>> PF00242.12  DNA polymerase (viral) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.4    0.0015         4     274     327 ..      65     118 ..      30     123 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0015
  PF00242.12 274 kessarrsvgvedsssrvksnrasksssslsqsavretaysslstserassses 327
                    +++  +gv d+++ v+sn+ ++ssss+s+s++  +  s+ s+s  +sss s
  MMETSP1325-20131115|2053_1  65 FTNTSQDDYGVSDTTTSVSSNTSTSSSSSSSRSSSSGDDDSQASSSSGHSSSTS 118
                 456677788889999999999888888888888888888888888888888754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       888  (0.0649503); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 611.32
//
Query:       MMETSP1325-20131115|2052_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00041   20.0  15.5      0.038   13.6   5.0    2.2  2  PF07889.7  Protein of unknown function (DUF1664)
  ------ inclusion threshold ------
      0.014   15.0   4.5      0.027   14.1   3.1    1.5  1  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
      0.015   13.6   9.7      0.019   13.3   6.7    1.1  1  PF13166.1  AAA domain
      0.035   13.8   2.1      0.035   13.8   1.4    2.3  2  PF06428.6  GDP/GTP exchange factor Sec2p
      0.038   13.3  21.0      0.079   12.3  11.6    2.1  2  PF00038.16 Intermediate filament protein
        0.1   11.2   7.5       0.13   10.9   5.2    1.1  1  PF03036.11 Perilipin family
       0.34   11.0  10.9      0.088   12.9   4.7    1.9  2  PF11594.3  Mediator complex subunit 28
       0.52    8.6  15.2       0.64    8.3  10.6    1.1  1  PF02994.9  L1 transposable element
       0.54   10.8  10.2        4.8    7.7   1.9    2.4  2  PF06877.6  Protein of unknown function (DUF1260)
       0.73   10.3   9.6       0.22   12.0   3.1    2.2  2  PF03037.11 Kinetoplastid membrane protein 11
        1.1    8.2   5.7        1.3    8.0   4.0    1.1  1  PF04890.8  Family of unknown function (DUF648)
        1.1    8.6   6.9        1.3    8.4   4.5    1.3  1  PF05073.7  Baculovirus P24 capsid protein
        1.4    7.1   4.6        1.8    6.7   3.2    1.1  1  PF04906.8  Tweety
        2.1    7.2  10.7       0.37    9.6   3.2    1.8  2  PF07851.8  TMPIT-like protein
        2.8    5.5   8.4        3.4    5.2   5.8    1.2  1  PF01496.14 V-type ATPase 116kDa subunit family
        2.9    6.7  10.5        5.9    5.6   7.3    1.7  1  PF12018.3  Domain of unknown function (DUF3508)
        3.6    7.3   8.6          7    6.4   6.0    1.6  1  PF03717.10 Penicillin-binding Protein dimerisation domain
        3.9    6.4  13.3         12    4.8   9.2    1.7  1  PF02601.10 Exonuclease VII, large subunit
        4.1    7.3   6.2        6.5    6.7   4.3    1.5  1  PF08706.6  D5 N terminal like
        4.3    7.6  23.8       0.52   10.5   9.2    2.8  2  PF06005.7  Protein of unknown function (DUF904)
        5.1    5.3  20.2       0.67    8.2   7.0    2.0  2  PF05667.6  Protein of unknown function (DUF812)


Domain annotation for each model (and alignments):
>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   5.0   5.8e-05     0.038      45     123 ..      49     131 ..      42     134 .. 0.78
   2 !   11.6   0.9   0.00025      0.16      72     120 ..     133     182 ..     130     186 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5.8e-05
   PF07889.7  45 vasvtkqlekvsea...vasakkhLsqridnlddkldeqkeiskeikeevteiredl.saikedvkslkqvvegLesklesle 123
                 ++s+  ql +  e+     ++k++L  ++++++++l++++e +  i++ +t+  e + +++ + + +l+ +v+ L+ kle+ e
  MMETSP1325-20131115|2052_1  49 CTSLQMQLAERTEDasrALATKRQLEIKVEEVNKSLEDKEEATLYITQAMTRQYEAMqEQLVDKITQLEMTVQDLQDKLEESE 131
                 666666665544431113579********************99999999987666552689999***************9855 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00025
   PF07889.7  72 nlddkldeqkeiskeikeevteiredlsaikedvk.slkqvvegLeskle 120
                 +l++k+ e+++i+ + +ee+++++++++++ +++  +lk+++ ++++++e
  MMETSP1325-20131115|2052_1 133 ELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGgMLKETLDKMRERIE 182
                 5899*****************************96367889999998886 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   3.1   4.2e-05     0.027      17     121 ..      62     172 ..      48     187 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.2e-05
   PF04513.7  17 dLtnvLnairlqnvqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalq.......dtlrneLtnlnsiltnLlssvtNinstLnnllqalnnldlg 121
                 d + +L++ r +++++  ++++ l++ e+    +++++++  ++++++l + +t+L+ +++ lq        +l+ ++   ++i+++ + +++N+++ ++ + q   ++ ++
  MMETSP1325-20131115|2052_1  62 DASRALATKRQLEIKV-EEVNKSLEDKEEATLYITQAMTRQYEAMQEQLVDKITQLEMTVQDLQdkleeseLELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGMLKE 172
                 5667777777777787.77888888877777788888888888888888888888888888888555444334556677777888888888888888888887777766444 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   6.7   2.9e-05     0.019     337     459 ..      48     164 ..      39     205 .. 0.41

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.9e-05
   PF13166.1 337 eleklekaleeKlkdpfsslelesi.adeieeinelvdkinelirkhNe.kidnlkeeknkakkklwlhlvaelkedideyekklkklekkinslekeleklekeikklekeikelekelkneep 459
                 e  +l+ +l+e+++d+++ l+++   + ++ee+n+++++ +e      + +++++++ ++++ +k+ +     l+  ++++++kl+++e    +le++  ++e+ i+++++ei+++++++++  +
  MMETSP1325-20131115|2052_1  48 ECTSLQMQLAERTEDASRALATKRQlEIKVEEVNKSLEDKEEATLYITQaMTRQYEAMQEQLVDKITQ-----LEMTVQDLQDKLEESE---LELERKMREKEAIISSKNEEIANMKNKMEDMAQ 164
                 44445555555555555544443320222333333333222222222111333333333333333322.....2222223333333333...344444445555555555555555555544322 PP

>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   8.2     0.042        27       2      76 ..      55     129 ..      54     132 .. 0.90
   2 ?   13.8   1.4   5.4e-05     0.035      49      92 ..     127     170 ..     125     180 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.042
                 HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF06428.6   2 elaeekkkreeaekekkkleqEveeLTasLF..eEAnkmVanArkekeaveeknekleeqLkekelllevlqaqlke 76 
                 +lae  +   +a + k +le  vee   sL   eEA   + +A   ++++e+ +e+l +++   e+ +++lq++l+e
  MMETSP1325-20131115|2052_1  55 QLAERTEDASRALATKRQLEIKVEEVNKSLEdkEEATLYITQAM--TRQYEAMQEQLVDKITQLEMTVQDLQDKLEE 129
                 578888888999999***************72269999999999..999************************9986 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 5.4e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT-------XX CS
   PF06428.6  49 veeknekleeqLkekelllevlqaqlkeLKelleslekekngss 92 
                 +ee + +le +++eke+++++ +++++++K+ +e++ +e+ g+ 
  MMETSP1325-20131115|2052_1 127 LEESELELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGML 170
                 566777899***************************99998776 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   7.3    0.0045       2.9      46     134 ..      39     128 ..      31     128 .. 0.90
   2 ?   12.3  11.6   0.00012     0.079     195     289 ..      75     170 ..      71     176 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0045
  PF00038.16  46 sklkelyekelaelrkqldeltkerarleleldnlreeledlrekyekelnkresaEaelaklrkdldeatlarv.dleakveslkeele 134
                 +  ++ y +e  +l+ ql e t++ +r  +  ++l+ ++e++++++e++ +    + + ++ +   ++e+ + ++ +le+ v+ l++ le
  MMETSP1325-20131115|2052_1  39 RGERDRYAAECTSLQMQLAERTEDASRALATKRQLEIKVEEVNKSLEDKEEATLYITQAMTRQYEAMQEQLVDKItQLEMTVQDLQDKLE 128
                 556899*******************************************99999999999999999999999996489999999999875 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.00012
  PF00038.16 195 akleelqeeaeknsea.lrsakeeitelrrqiqsleieleslkkqkeslerqlaeleerleeelkklqekiseleeelqelkeemarqlreYqeLl 289
                  k+ee++++ e ++ea l  ++    ++  + ++l  ++ +l  + + l+++l+e e +le+++++ ++ is+++ee++++k++m+ + +e+  +l
  MMETSP1325-20131115|2052_1  75 IKVEEVNKSLEDKEEAtLYITQAMTRQYEAMQEQLVDKITQLEMTVQDLQDKLEESELELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGML 170
                 68999999988776651555666666777777889999*****************************************************97665 PP

>> PF03036.11  Perilipin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   5.2    0.0002      0.13     270     390 ..      56     176 ..      44     177 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.0002
                 ----------------------------SHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHT----SGGG-----HHHHHHHHHHHHHHHHHHHHHHHT- CS
  PF03036.11 270 lkeaqeklkelWlelsqkepeeqeekaeeeelesrtllllreltqqlqttvlslvssvqglPaavqeqvtevrrsveelqaslskassledvsaealsssrerlaklresLdgvtdyvlen 390
                 l+e+ e +    +   q e + +e +++ e  e++tl +++ +t+q   + ++lv  +++l  +vq+   ++++s  el+ ++++ + +    +e++++++++++ + +   g+++ +l++
  MMETSP1325-20131115|2052_1  56 LAERTEDASRALATKRQLEIKVEEVNKSLEDKEEATLYITQAMTRQYEAMQEQLVDKITQLEMTVQDLQDKLEESELELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGMLKETLDK 176
                 55555555555555555555555778899999**********************************************************999***************9999988887765 PP

>> PF11594.3  Mediator complex subunit 28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2       2.2   1.4e+03      61      77 ..      73      89 ..      47     109 .. 0.54
   2 ?   12.9   4.7   0.00013     0.088      24      97 ..     109     184 ..      97     198 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 2.2
   PF11594.3 61 idskidylenlltDaed 77
                 + k++  ++ l+D+e+
  MMETSP1325-20131115|2052_1 73 LEIKVEEVNKSLEDKEE 89
                22233334444444444 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 0.00013
   PF11594.3  24 vleKrleL..svlkfkkvlkEeaqklkeElqrkdqLvtKidskidylenlltDaed.vyKvrdevlnegrqriaels 97 
                 +++K  +L   v++ +  l+E   +l   +  k++++   +++i  ++n ++D+ +      +e l+++r+ri  ls
  MMETSP1325-20131115|2052_1 109 LVDKITQLemTVQDLQDKLEESELELERKMREKEAIISSKNEEIANMKNKMEDMAQeFGGMLKETLDKMRERIE-LS 184
                 6778777777*******************************************755055788999999999985.55 PP

>> PF02994.9  L1 transposable element
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  10.6   0.00098      0.64      60     170 ..      69     176 ..      37     187 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00098
                 XXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXX.........................XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF02994.9  60 lredveakakevqkvlkelkeiitkqvevlieeeekslkelmelkkklkelkeeveaikkeqseatldietlkkksgvvdlsisnriqeleerisgaedsieeikstvken 170
                  + ++e k +ev+k+l +++e +    ++++ + e  + +l     k+ +l + v+ ++ +  e+ l++e + + + ++  s  + i ++ +++  + ++   + ++  ++
  MMETSP1325-20131115|2052_1  69 TKRQLEIKVEEVNKSLEDKEEATLYITQAMTRQYEAMQEQL---VDKITQLEMTVQDLQDKLEESELELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGMLKETLDK 176
                 377899999*************9997777777777777665...5689999*********9*************9999999999999999999999988887765555443 PP

>> PF06877.6  Protein of unknown function (DUF1260)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.9    0.0073       4.8      33      84 ..      58     108 ..      54     122 .. 0.81
   2 ?    7.7   2.6    0.0074       4.8      37      98 ..     105     169 ..     100     171 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0073
   PF06877.6  33 edeedlekaaeeleksgyevesaeeseedgegvwcldveremtldyeeIdaq 84 
                 e  ed+ +a+   ++++++ve++ +s ed+e++ +l +++ mt +ye++++q
  MMETSP1325-20131115|2052_1  58 ERTEDASRALATKRQLEIKVEEVNKSLEDKEEA-TLYITQAMTRQYEAMQEQ 108
                 56789999999999***********98877766.899999999999999876 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0074
   PF06877.6  37 dlekaaeeleksgyevesaeeseedge...gvwcldveremtldyeeIdaqeeeleelaekfgge 98 
                   e++++++++++++v++++ + e+ e   +  + + e   + ++eeI +   ++e++a++fgg+
  MMETSP1325-20131115|2052_1 105 MQEQLVDKITQLEMTVQDLQDKLEESElelERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGM 169
                 5689999***********98874444411133334444445567888888888888899999886 PP

>> PF03037.11  Kinetoplastid membrane protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.2      0.91   5.9e+02      19      53 ..      73     107 ..      56     119 .. 0.62
   2 ?   12.0   3.1   0.00033      0.22       3      66 ..     118     181 ..     116     191 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.91
  PF03037.11  19 fakkmeeqnkkffadkpdestl..spemkehyekfek 53 
                 ++ k+ee nk  + dk +e+tl  +  m  +ye +++
  MMETSP1325-20131115|2052_1  73 LEIKVEEVNKS-LEDK-EEATLyiTQAMTRQYEAMQE 107
                 55677777765.4565.45554225678888876543 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00033
  PF03037.11   3 ttyeefaakldrldeefakkmeeqnkkffadkpdestlspemkehyekfekmiqehtdkfnkkm 66 
                  t +++  kl+  + e+++km+e+++ + + + + + +  +m +  + f  m++e  dk+  ++
  MMETSP1325-20131115|2052_1 118 MTVQDLQDKLEESELELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGMLKETLDKMRERI 181
                 57899999****************9988888888899*********************987765 PP

>> PF04890.8  Family of unknown function (DUF648)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   4.0     0.002       1.3     194     305 ..      56     149 ..      45     181 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.002
   PF04890.8 194 vldesdlsqstlnleseldltlkadkrsiekklrellneesKksklkevlkklllkgikqeviesPefieelveeylkelsldsinlhadeldqklleqLlkavvrlhGsen 305
                   + ++  +  l ++++l+ ++++ ++s+e+k +  l++++  +++ e ++++l+++i+q        +e  v++   +l+  ++ l+     +k++e+  +a++    s+n
  MMETSP1325-20131115|2052_1  56 LAERTEDASRALATKRQLEIKVEEVNKSLEDKEEATLYITQAMTRQYEAMQEQLVDKITQ--------LEMTVQDLQDKLEESELELE-----RKMREK--EAIIS---SKN 149
                 44555667778999**********************************************........55555555555555555555.....444442..33433...333 PP

>> PF05073.7  Baculovirus P24 capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.5     0.002       1.3     101     170 ..     104     179 ..      77     189 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.002
   PF05073.7 101 Gaqseavdplkdiktqlctlqecleesnvlvn......sttesssnenieslreilrseeasllsnlnsllesiks 170
                   q++ vd++++++ ++++lq++lees+  ++      +   ss+ne+i +++++++   +++ + l+++l+++++
  MMETSP1325-20131115|2052_1 104 AMQEQLVDKITQLEMTVQDLQDKLEESELELErkmrekEAIISSKNEEIANMKNKMEDMAQEFGGMLKETLDKMRE 179
                 57999********************999887766654222222336888899999888888888888888888776 PP

>> PF04906.8  Tweety
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   3.2    0.0028       1.8      91     172 ..      77     163 ..      71     178 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0028
   PF04906.8  91 vlqltyslrkanhtlagikklvseteesleekleqeLtkleeifakrtd.....lletlrllqeqveeivqqlseipfwkeaelslt 172
                 v ++ +sl++ +++   i++ ++ + e+++e+l +++t+le  ++  +d      le  r+++e+   i ++ +ei+++k++  +++
  MMETSP1325-20131115|2052_1  77 VEEVNKSLEDKEEATLYITQAMTRQYEAMQEQLVDKITQLEMTVQDLQDkleesELELERKMREKEAIISSKNEEIANMKNKMEDMA 163
                 67899999999999999*************************999998877777788889999999999999999999988866554 PP

>> PF07851.8  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   8.5      0.09        59       5      89 ..      76     164 ..      44     166 .. 0.82
   2 ?    9.6   3.2   0.00057      0.37      10      94 ..     110     198 ..     103     201 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.09
   PF07851.8   5 ewkelekefkeleethkkykqk.leeleklqekcasaikkqkkrlkelkkslkklkkk...ltkeekekvekleeeikerkaqlfdmes 89 
                  ++e++k+ ++ ee+     q  +++ e +qe+  ++i++ + ++++l+ +l++ + +     +e+++ +++ +eei+++k+++ dm +
  MMETSP1325-20131115|2052_1  76 KVEEVNKSLEDKEEATLYITQAmTRQYEAMQEQLVDKITQLEMTVQDLQDKLEESELElerKMREKEAIISSKNEEIANMKNKMEDMAQ 164
                 57778888877666655544442578899999***************9999999887744344588899999999*******9999976 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00057
   PF07851.8  10 ekefkeleethkk....ykqkleeleklqekcasaikkqkkrlkelkkslkklkkkltkeekekvekleeeikerkaqlfdmesflPkk 94 
                  ++  +le t +       ++  ele+  +++ + i++++ ++ ++k++++++ ++     ke+++k++e+i+  ++  fd +s +P +
  MMETSP1325-20131115|2052_1 110 VDKITQLEMTVQDlqdkLEESELELERKMREKEAIISSKNEEIANMKNKMEDMAQEFGGMLKETLDKMRERIELSNNGGFDADSGVPIQ 198
                 4444444444444000044455566777788889999****************************************99**99999976 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   5.8    0.0052       3.4      44     259 ..      74     159 ..      43     204 .. 0.38

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0052
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXX.XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14  44 eseikkakielkdekekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrelssldeefkalraaeglklgfvaGvikreklealerllwralrgnlyikqaeieevledpkekvekevfiiffvgeellekvkkilesfgaelyevpeteeersellskvnkriedlktvleeteselekvlaki 259
                 e ++++ +++l+d++e + + ++    ++e+  e+l  ++ ++e + + L+ +l+e e                                                                                                                                   ++++++ + +    + ++e+ +++ k+
  MMETSP1325-20131115|2052_1  74 EIKVEEVNKSLEDKEEATLYITQAMTRQYEAMQEQLVDKITQLEMTVQDLQDKLEESE----------------------------------------------------------------------------------------------------------------------------------LELERKMREKEAIISSKNEEIANMKNKM 159
                 2233333333332222222222222222222222222222222222222222222211..................................................................................................................................1111111111111111111111111111 PP

>> PF12018.3  Domain of unknown function (DUF3508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   7.3    0.0091       5.9      33     106 ..      78     148 ..      46     183 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0091
   PF12018.3  33 eevaenptmakevpekllkeaLynlrQyeiflkillsdvdalaqevekeqkrleaqiekLketlksktavpteq 106
                 eev  +    ke    ++++a   +rQye+  + l  ++ +l+  v+++q +le    +L+ +++ k+a+ +++
  MMETSP1325-20131115|2052_1  78 EEVN-KSLEDKEEATLYITQA--MTRQYEAMQEQLVDKITQLEMTVQDLQDKLEESELELERKMREKEAIISSK 148
                 3332.2222333333344665..579*******************************************98765 PP

>> PF03717.10  Penicillin-binding Protein dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   6.0     0.011         7      20      89 ..      86     153 ..      41     187 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.011
  PF03717.10  20 nrpsytltvdpkkkkekeaeelnevaeklieekkklaeelakildldeeeirkilkekeaiksyqpvvla 89 
                 +++  tl+++++++  +++e ++e+    i++ + ++++l ++l+++e e++++++ekeai s+++  +a
  MMETSP1325-20131115|2052_1  86 DKEEATLYITQAMT--RQYEAMQEQLVDKITQLEMTVQDLQDKLEESELELERKMREKEAIISSKNEEIA 153
                 45566777766666..344445555555566****************************99987766665 PP

>> PF02601.10  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   9.2     0.018        12     188     270 ..      97     181 ..      37     189 .. 0.44

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.018
  PF02601.10 188 kplskleqeeerleelkerlek...sleqllqskesqleklnaslaknnpdyklnkklekitllkneldsels....saesklrileekl 270
                 + ++++e ++e+l++  ++le     l+ +l+++e +le+     + ++++ +++ k e+i  +kn+++ +++      ++ l +++e++
  MMETSP1325-20131115|2052_1  97 AMTRQYEAMQEQLVDKITQLEMtvqDLQDKLEESELELER-----KMREKEAIISSKNEEIANMKNKMEDMAQefggMLKETLDKMRERI 181
                 2344455555555555555554222333333333333333.....233333333333333333333333333322222233333333333 PP

>> PF08706.6  D5 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   4.3    0.0099       6.5      34      94 ..      88     177 ..      47     194 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0099
   PF08706.6  34 keaareladkvaeliaeea.......................eeaksaakalkkfakssrskkkvknvlreakemp......ldleidel 94 
                 +ea+ ++ +++++ +++ +                        e++ + k+++k+a+ s ++ ++ n+ ++ + m+      l  ++d++
  MMETSP1325-20131115|2052_1  88 EEATLYITQAMTRQYEAMQeqlvdkitqlemtvqdlqdkleeSELELERKMREKEAIISSKNEEIANMKNKMEDMAqefggmLKETLDKM 177
                 66666666666655544445556777888888888899998899****************************999877766655555544 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   3.9         2   1.3e+03      21      53 ..      50      85 ..      47     109 .. 0.54
   2 ?   10.5   9.2   0.00079      0.52      13      71 ..     106     179 ..      96     180 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 2
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...H CS
   PF06005.7 21 alLqmeieeLkeeneqlkeeneeLeeenkklk...e 53
                + Lqm ++e  e+++ +  ++++Le + + +    e
  MMETSP1325-20131115|2052_1 50 TSLQMQLAERTEDASRALATKRQLEIKVEEVNkslE 85
                667888887777766666666666644444433332 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00079
                 HHHHHHHHHHHHHHHHHHHHHHHHHH...............HHHHHHHHHHHHHHHHH---TTHHHHH------ CS
   PF06005.7  13 iqqAvdtialLqmeieeLkeeneqlk...............eeneeLeeenkklkeereawqerlralLgklee 71 
                  +q+vd+i+ L+m ++ L+++ e+++               ++nee+ +  +k+ + ++++  +l++ L k++e
  MMETSP1325-20131115|2052_1 106 QEQLVDKITQLEMTVQDLQDKLEESElelerkmrekeaiisSKNEEIANMKNKMEDMAQEFGGMLKETLDKMRE 179
                 5799****************97777799************999*****************************87 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   1.9     0.052        34     425     469 ..      46      90 ..      39      96 .. 0.73
   2 ?    8.2   7.0     0.001      0.67     411     483 ..      96     165 ..      90     167 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.052
   PF05667.6 425 idelrelkekarekedetkrkleeikklrekikeleselqtkeel 469
                  +e  +l+ + +e++++++r l   ++l  k++e+ + l+ kee+
  MMETSP1325-20131115|2052_1  46 AAECTSLQMQLAERTEDASRALATKRQLEIKVEEVNKSLEDKEEA 90 
                 566677777777888888888888888888888888888777765 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.001
   PF05667.6 411 leLaqqWeahrkpLidelrelkekarekedetkrkleeik.klrekikeleselqtkeelykqLlkeyenasks 483
                 + +++q+ea ++ L+d++ +l+   +    + + klee + +l +k++e e+ +  k+e+++++++++e + ++
  MMETSP1325-20131115|2052_1  96 QAMTRQYEAMQEQLVDKITQLEMTVQ----DLQDKLEESElELERKMREKEAIISSKNEEIANMKNKMEDMAQE 165
                 5799******************7766....777777777657999*************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1962  (0.143505); expected 273.4 (0.02)
Passed bias filter:                      617  (0.0451287); expected 273.4 (0.02)
Passed Vit filter:                       104  (0.00760679); expected 13.7 (0.001)
Passed Fwd filter:                        39  (0.00285255); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.99u 0.39s 00:00:01.38 Elapsed: 00:00:00.66
# Mc/sec: 777.00
//
Query:       MMETSP1325-20131115|2057_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   12.4   0.4      0.056   12.4   0.3    1.0  1  PF11510.3 Fanconi Anaemia group E protein FANCE


Domain annotation for each model (and alignments):
>> PF11510.3  Fanconi Anaemia group E protein FANCE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   4.1e-06     0.056      43      84 ..       2      42 ..       1      44 [] 0.85

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.1e-06
   PF11510.3 43 llhecdpsevellcavlqlselselgllrlcscllklapdls 84
                +l e  p++v++l    ql ++    +  l +c+l+la dl+
  MMETSP1325-20131115|2057_1  2 VLEEARPDDVDVLAELQQLHRVQLHQIHDL-ACVLRLASDLA 42
                899**********99999999987777666.7999****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 198.94
//
Query:       MMETSP1325-20131115|2055_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.6   0.4      0.067   12.5   0.1    1.6  2  PF06941.7 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
        0.1   12.3   2.2       0.24   11.1   1.5    1.6  1  PF08328.6 Adenylosuccinate lyase C-terminal
        2.9    8.1  14.2         11    6.3   3.3    3.3  3  PF06156.8 Protein of unknown function (DUF972)
        5.4    5.7  10.2        9.5    4.9   7.0    1.4  1  PF10186.4 UV radiation resistance protein and autophagy-related subunit 14
          8    6.6   7.4        1.7    8.7   1.6    2.3  3  PF09969.4 Uncharacterized conserved protein (DUF2203)


Domain annotation for each model (and alignments):
>> PF06941.7  5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.5e-05     0.067      55     136 ..      33     115 ..      20     119 .. 0.65
   2 ?   -2.3   0.0      0.84   2.3e+03      92     103 ..     156     167 ..     139     225 .. 0.61

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.5e-05
   PF06941.7  55 laeklarfvesrgfFldlepipgaveaLreladekdeeviittsplqkydh....avkekveWvdkhlpgiplenivltkdKtvvr 136
                  + k  ++ +++ + ++l+    a ea ++      +   +t +    yd     a++ek  W++ hl  +  +  + + +K+++r
  MMETSP1325-20131115|2055_1  33 VQSKTQSWTQRKALLAELQERKRAFEAAEQKM---MRMEALTDEEQEMYDLtsgdAIQEKLTWLQAHLKAMVENGEITMGEKQQLR 115
                 55555566666777777765544444443311...122344444444444444459**************999999*******997 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.84
   PF06941.7  92 eviittsplqky 103
                  +i+ ++p++++
  MMETSP1325-20131115|2055_1 156 AMIMEHTPIRHP 167
                 344444444433 PP

>> PF08328.6  Adenylosuccinate lyase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.5   8.7e-05      0.24      28     108 ..      30     116 ..      20     121 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 8.7e-05
   PF08328.6  28 ksllkgleklevneealaedLdanwevlaEaiqtvlrregieepYeklkeltrgkkitke......elkefieelelpeeakeeLka 108
                 ++++++ ++  ++++al ++L++       a q ++r+e++++  +++ +lt g++i+++      +lk+++e+ e++  +k++L++
  MMETSP1325-20131115|2055_1  30 QKMVQSKTQSWTQRKALLAELQERKRAFEAAEQKMMRMEALTDEEQEMYDLTSGDAIQEKltwlqaHLKAMVENGEITMGEKQQLRE 116
                 555566666667889999************************************999864332222899999999999999999986 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   1.1      0.16   4.4e+02      11      55 ..      27      70 ..      22      84 .. 0.62
   2 ?    6.3   3.3    0.0039        11      18      77 ..      84     150 ..      65     157 .. 0.73
   3 ?    5.4   0.0    0.0075        21      17      68 ..     206     257 ..     192     268 .. 0.76

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.16
   PF06156.8 11 seleeqleelleeleelkkelkelleenaelkleneklrerleel 55
                +++++ +++ +++ ++ k+ l+el e+  + +   +k+ + +e l
  MMETSP1325-20131115|2055_1 27 ATFQKMVQSKTQSWTQRKALLAELQERKRAFEAAEQKMMR-MEAL 70
                5566666777777777777777777777777766666554.2222 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0039
   PF06156.8  18 eelleeleelkkelkelleenaelkleneklrerleelee.......eekkkekkkkkkklgegkdn 77 
                 ++++e+l+ l+++lk+++e+ +    e ++lre++ e  +       +++++ k kk++kl e   n
  MMETSP1325-20131115|2055_1  84 DAIQEKLTWLQAHLKAMVENGEITMGEKQQLREQVGEKLAlkreelaAAEAEGKPKKVEKLTEVIAN 150
                 467899999***********99999*********999877655555444444444555555555555 PP

  == domain 3    score: 5.4 bits;  conditional E-value: 0.0075
   PF06156.8  17 leelleeleelkkelkelleenaelkleneklrerleeleeeekkkekkkkk 68 
                 + +ll+++eel+++  + +e+++e +   +++ +   +l ++++k+ ++kk+
  MMETSP1325-20131115|2055_1 206 IPDLLAQIEELENDSRAWFEDDTEFQARCDTVANAAVKLVAKSQKAAAAKKS 257
                 5678999999999999999999999999999988877776644444333333 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   7.0    0.0035       9.5      24     162 ..      42     187 ..      33     209 .. 0.69

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0035
   PF10186.4  24 elrlrlanlkaeketlkkkveealeeaene..kklaaqqlklevaskkeri..eqirkrieqlkeeieqkrerieelkealaqrrsdle.asaqlekrraeqlaklqeeikrtksklns.lesltaekR.sqlcrelaklfplrrv 162
                 + +  la l+++k +++   ++++  +  +   ++  ++ + +  + k     + +++ +e+ +  + +k++++e+  e+la +r+ l+ a a+ + ++ e+l ++ ++++ +++ +++ +      k+   ++++ ++l pl++ 
  MMETSP1325-20131115|2055_1  42 QRKALLAELQERKRAFEAAEQKMMRMEALTdeEQEMYDLTSGDAIQEKLTWlqAHLKAMVENGEITMGEKQQLREQVGEKLALKREELAaAEAEGKPKKVEKLTEVIANLSARHAMIMEhTPIRHPLKHeQAIVKLRRELIPLQQL 187
                 667778888888888888888887744333545555555555544444332224577778888899***********************999999999999999998888888887766433332223303456666677777665 PP

>> PF09969.4  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   1.6   0.00062       1.7       7      73 ..      42     107 ..      36     118 .. 0.85
   2 ?   -0.9   0.1      0.61   1.7e+03      44      56 ..     133     145 ..     105     187 .. 0.56
   3 ?   -0.9   0.0       0.6   1.6e+03      17      43 ..     208     234 ..     193     262 .. 0.45

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00062
   PF09969.4   7 eAnellpeieelleevkelkaeleeleealeeaekeleaeelkeeleeleeqiraaieeieelGvev 73 
                 + ++ll e++e+ + +++++++++++ eal+++e+e+   ++ ++++e+ ++++a+++++ e G + 
  MMETSP1325-20131115|2055_1  42 QRKALLAELQERKRAFEAAEQKMMRM-EALTDEEQEMYDLTSGDAIQEKLTWLQAHLKAMVENGEIT 107
                 55789*********************.7778888999899999999999999999999999998765 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.61
   PF09969.4  44 eaeelkeeleele 56 
                 eae + +++e+l+
  MMETSP1325-20131115|2055_1 133 EAEGKPKKVEKLT 145
                 2222222222222 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.6
   PF09969.4  17 elleevkelkaeleeleealeeaekel 43 
                 +ll++++el+++ +   e  +e++ ++
  MMETSP1325-20131115|2055_1 208 DLLAQIEELENDSRAWFEDDTEFQARC 234
                 444444444444444433333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1066  (0.0779696); expected 273.4 (0.02)
Passed bias filter:                      439  (0.0321094); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1325.04
//
Query:       MMETSP1325-20131115|2054_1  [L=488]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-15   56.1   0.7    7.4e-15   54.5   0.2    2.1  2  PF04777.8  Erv1 / Alr family
    7.4e-11   41.5   0.0    1.4e-10   40.6   0.0    1.4  1  PF00085.15 Thioredoxin
  ------ inclusion threshold ------
      0.076   13.0   0.3       0.25   11.4   0.0    2.0  2  PF13905.1  Thioredoxin-like


Domain annotation for each model (and alignments):
>> PF04777.8  Erv1 / Alr family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.5   1.1e+04      28      44 ..     267     283 ..     264     291 .. 0.59
   2 !   54.5   0.2   1.6e-18   7.4e-15       1      93 [.     338     426 ..     338     430 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 2.5
                 HH---CCCC---HHHHH CS
   PF04777.8  28 allkslrhffpCeeCae 44 
                 ++l++++h++p +e +e
  MMETSP1325-20131115|2054_1 267 NFLDVVAHTYPIKEQRE 283
                 56666666666555444 PP

  == domain 2    score: 54.5 bits;  conditional E-value: 1.6e-18
                 HHHHHHHHHHHHCCHTS--HCHHHHHHHH---CCCC---HHHHHHHHHHHHH.CGGG-SSHHHHHHHHHHHHHHHHHHCT--T.CS-TTCHHCT CS
   PF04777.8   1 rslWtllHtlaarapekpteeekevleallkslrhffpCeeCaehfekllee.npkevssrddlvkwlweaHNeVNarLgkpeftedekvkery 93 
                 ++lW l+Ht+  + +         +l+++++++++f++C eCa++f +  ee n   v+ + d v+wlw++HN V +rL  +  t  +  k ++
  MMETSP1325-20131115|2054_1 338 CGLWLLFHTMISNSDRAHA---PLTLRTIFEWVQSFYGCIECAANFNEEWEEyNGDGVTDHMDTVLWLWKVHNLVRERLTLEDDTVSP--KLQW 426
                 89*******9888777655...459*************************9989999**********************988744333..4455 PP

>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.0     3e-14   1.4e-10      20      95 ..      77     155 ..      72     163 .. 0.85

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 3e-14
                 CEEEEEE-TT---HHHHHHHHHHHHHHTT-..TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEEEE---..-HH CS
  PF00085.15  20 lvlvefyApwCGhCkalaPeyeklaeelke..kvvlakvdvdenkdlaseygvegiPtlklfkngkkveevega.reke 95 
                 ++ v f+ p+CG C+++ P++++l +++++  ++ +a +d+ + +  +++ gv+  Pt+ l+  +k++++ + + ++k+
  MMETSP1325-20131115|2054_1  77 TWAVFFHKPYCGACRRIRPIFHALGNKVNSseHIRFASLDCVKYRVFCQRAGVDKEPTIRLYGYDKEKARPVAPsAKKK 155
                 56799***********************9999******************************98888775544424444 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.5e-05      0.25       5      44 ..      79     117 ..      75     158 .. 0.76
   2 ?   -1.8   0.1      0.71   3.2e+03       2      19 ..     460     477 ..     459     479 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.5e-05
   PF13905.1   5 llyfaaswcppckaftpelkelyeklkaskdkveivyVsl 44 
                 +++f++++c+ c+++ p  ++l +k++ s+  +++  + +
  MMETSP1325-20131115|2054_1  79 AVFFHKPYCGACRRIRPIFHALGNKVN-SSEHIRFASLDC 117
                 89***********************99.466666655555 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.71
   PF13905.1   2 kivllyfaaswcppckaf 19 
                 ++v+ y+  ++c+ ++ f
  MMETSP1325-20131115|2054_1 460 DYVFAYIQETFCQGSDTF 477
                 899**********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.84u 0.37s 00:00:01.21 Elapsed: 00:00:00.52
# Mc/sec: 2248.89
//
Query:       MMETSP1325-20131115|2056_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 397.69
//
Query:       MMETSP1325-20131115|2058_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-07   28.8   0.6    1.5e-06   27.0   0.4    1.8  1  PF01270.12 Glycosyl hydrolases family 8


Domain annotation for each model (and alignments):
>> PF01270.12  Glycosyl hydrolases family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.4   1.1e-10   1.5e-06     160     258 ..      48     170 ..      39     176 .. 0.76

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 1.1e-10
                 -------BESSEEEE-CCCS-HHHHHHHHCCH.--THHHHH...HHHHHHHHHHT-..........B..--B--SSEEEETT--EEES--...........TTSEESTTTCHHHHHHHHTTTT.S CS
  PF01270.12 160 lpGdvgfkkddsvalnpSyfvlpalrafaert.gdkrWrnv...iddlyellselr..........sgktgLvpDwvalnadpasadale...........ypyrasydaiRialyysmygds.a 258
                  pG+ g +++  + +np yf   ++r f +   +++r +     +++l ++l+++           s + gLv+ w +l  ++ + d +            y+++as+ ++R+al+y++y+++ a
  MMETSP1325-20131115|2058_1  48 SPGANGANRN--LCINPAYFSPGQWRLFRDYLaANPRYVPAsytAEELGQVLDSAIvwgyntlnriSCENGLVSNWWTLPDQGWPWDGSLscansgtsagaYYSDASRIPWRVALDYLWYPEEtA 170
                 7999999999..999******899**9999751566665431113444444444446777777888889**********97766555554566679*************************8744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 1500.12
//
Query:       MMETSP1325-20131115|2059_1  [L=362]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-38  129.5   0.0    1.9e-37  128.3   0.0    1.7  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    1.6e-05   23.9   0.0    4.8e-05   22.3   0.0    1.8  2  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    3.1e-05   23.7   0.1     0.0001   22.0   0.1    2.1  1  PF13671.1  AAA domain
    4.2e-05   23.5   0.2     0.0017   18.3   0.1    2.9  2  PF13401.1  AAA domain
    4.3e-05   23.1   0.3    0.00065   19.3   0.2    2.8  1  PF07728.9  AAA domain (dynein-related subfamily)
    5.1e-05   23.1   0.0    0.00011   22.0   0.0    1.5  1  PF07724.9  AAA domain (Cdc48 subfamily)
    5.7e-05   23.7   0.1    0.00017   22.2   0.0    1.9  1  PF13207.1  AAA domain
     0.0002   20.5   0.1     0.0005   19.1   0.1    1.6  1  PF01078.16 Magnesium chelatase, subunit ChlI
     0.0002   20.7   0.0    0.00034   19.9   0.0    1.3  1  PF01695.12 IstB-like ATP binding protein
    0.00067   19.4   0.0     0.0012   18.5   0.0    1.4  1  PF13173.1  AAA domain
      0.001   19.3   2.0     0.0083   16.4   0.3    3.1  3  PF13191.1  AAA ATPase domain
     0.0014   18.1   0.4      0.003   17.0   0.1    1.6  1  PF13479.1  AAA domain
      0.003   17.3   0.1     0.0078   16.0   0.0    1.7  1  PF13521.1  AAA domain
     0.0055   16.3   2.3      0.011   15.2   0.7    2.2  1  PF13245.1  Part of AAA domain
     0.0057   15.3   0.1     0.0093   14.6   0.0    1.4  1  PF06068.8  TIP49 C-terminus
     0.0066   15.9   0.0      0.015   14.8   0.0    1.5  1  PF13086.1  AAA domain
      0.007   16.5   0.1      0.015   15.4   0.0    1.8  1  PF13238.1  AAA domain
     0.0077   15.6   0.1       0.02   14.2   0.0    1.9  1  PF00158.21 Sigma-54 interaction domain
  ------ inclusion threshold ------
      0.021   14.0   4.6       0.12   11.5   0.3    2.7  3  PF13481.1  AAA domain
      0.027   13.6   0.8      0.066   12.3   0.3    1.8  2  PF02562.11 PhoH-like protein
      0.043   12.8   0.2      0.083   11.8   0.2    1.4  1  PF06414.7  Zeta toxin
      0.053   13.0   0.5        0.2   11.1   0.3    1.9  2  PF05729.7  NACHT domain
      0.056   13.5   0.0       0.17   11.9   0.0    1.9  1  PF00910.17 RNA helicase
      0.076   12.1   0.3        1.1    8.3   0.1    2.4  2  PF12846.2  AAA-like domain
      0.079   11.7   0.0       0.12   11.2   0.0    1.3  1  PF05673.8  Protein of unknown function (DUF815)
      0.089   12.5   0.0       0.21   11.4   0.0    1.6  1  PF09336.5  Vps4 C terminal oligomerisation domain
      0.096   11.6   0.3       0.25   10.2   0.2    1.8  1  PF06745.8  KaiC


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.3   0.0   3.7e-40   1.9e-37       1     131 [.      87     218 ..      87     219 .. 0.97

  Alignments for each domain:
  == domain 1    score: 128.3 bits;  conditional E-value: 3.7e-40
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHHTTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkieie 131
                 vll+GppGtGKT+lakava+e g++fl++++s + +k++gesek+ +++f+ a++ a p+++f+DE+d++ +sr   ++s+++  ++v  ++++e+dg+++ +++v+vig tnrp +ld+a+l +R+ r+i ++
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGGATFLSVDASAIENKWLGESEKNAKAVFTLARRLA-PCVVFLDEVDSVLSSRehgDDSSHGTLTSVKTTIMQEWDGLRTTKDRVVVIGSTNRPFDLDEAVL-RRMPRRILVD 218
                 79******************************************************9.****************988888999999*************************************.7*****9886 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   9.6e-08   4.8e-05      48      89 ..      82     123 ..      75     161 .. 0.76
   2 ?   -2.7   0.0       4.3   2.2e+03     171     191 ..     246     266 ..     216     287 .. 0.57

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 9.6e-08
   PF05496.7  48 ealdhvllyGpPGlGkttlakiiakelgvelkvtsgPvleka 89 
                 ea+  vll+GpPG Gkt lak +a+e g+++ +  + ++e++
  MMETSP1325-20131115|2059_1  82 EAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASAIENK 123
                 78889************************9999999998754 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 4.3
   PF05496.7 171 givarlefyeveelkeivkrs 191
                 +i  +l+ y+ +++ke+ + +
  MMETSP1325-20131115|2059_1 246 AIARQLDGYTGSDIKEVCREA 266
                 455667777777777665544 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.1     2e-07    0.0001       2      33 ..      87     138 ..      87     255 .. 0.77

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 2e-07
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrlsqdt....................l 33 
                 vll G+pG+GK+ la++++ + g+++ls d+                    l
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGGATFLSVDAsaienkwlgeseknakavftL 138
                 799***********************99998665555444444444444441 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.1   3.4e-06    0.0017       7      46 ..      87     118 ..      82     200 .. 0.86
   2 ?   -0.1   0.0       1.7   8.4e+02      38      57 ..     212     231 ..     174     278 .. 0.58

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3.4e-06
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveap 46 
                 ++++G++G+GKT+l++ +a +          a++++v+a+
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEG--------GATFLSVDAS 118
                 689***************9976........6666666665 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 1.7
   PF13401.1  38 arvvfveapastspkellqk 57 
                 +r ++v++p+ t+  e+l+ 
  MMETSP1325-20131115|2059_1 212 PRRILVDLPDATTREEILRV 231
                 55556666666665555443 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.2   1.3e-06   0.00065       1      78 [.      86     156 ..      86     211 .. 0.59

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 1.3e-06
                 EEEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------..G-SEEEEESGGG-- CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar..egeilvlDEverae 78 
                 +vlL GppGtgK++la+ +a   +++++ v  ++      +  ++   ++ ++  +++++  ar   +++++lDEv+ + 
  MMETSP1325-20131115|2059_1  86 GVLLFGPPGTGKTMLAKAVATEGGATFLSVDASA------IENKWL--GESEKNAKAVFT-LARrlAPCVVFLDEVDSVL 156
                 59***************99998888888776665......666666..333344444444.4444888999999998433 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   2.1e-07   0.00011       6      92 ..      87     167 ..      83     188 .. 0.80

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 2.1e-07
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--..-EEEETGGG------------- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSr 92 
                 +ll gp g+Gkt+laka+a    +    ++  +das++      + l ++++ a+   + a      +v+lDE+d + ++++ g d S 
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGGA----TFLSVDASAIEN----KWLGESEKNAKAVFTLARRLApcVVFLDEVDSVLSSREHGDDSSH 167
                 5788****************9996....*********999....55555555555555555555588***********97777766664 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   3.4e-07   0.00017       2      46 ..      87     131 ..      87     239 .. 0.73

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 3.4e-07
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG.B--GGGS-B----- CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd.llreeglkelddge 46 
                 ++++GppG+GK+ lak++a + g   ls d+   +e  + +  + +
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGGATFLSVDAsA-IENKWLGESEKN 131
                 6899*****************999999999954.666666433333 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   9.9e-07    0.0005      17      43 ..      79     105 ..      76     107 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 9.9e-07
  PF01078.16  17 iaaaGgHnlllvGppGsGKtmlakrlp 43 
                 iaa     +ll+GppG+GKtmlak+++
  MMETSP1325-20131115|2059_1  79 IAAEAVKGVLLFGPPGTGKTMLAKAVA 105
                 78888889***************9875 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   6.8e-07   0.00034      48     116 ..      85     151 ..      78     164 .. 0.66

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 6.8e-07
  PF01695.12  48 enlvllGpsGvGKthlAialgveavraglsvlfvrledLveeLkrakgdgrleralkrlakvdllilDd 116
                 + ++l+Gp+G+GKt lA a+++e     lsv    +e+  + L   ++++++  +l+r +   ++ lD+
  MMETSP1325-20131115|2059_1  85 KGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASAIEN--KWLGESEKNAKAVFTLARRLAPCVVFLDE 151
                 689*****************998765555554444433..33555555555555555555555555555 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   2.5e-06    0.0012       5      99 ..      87     198 ..      84     217 .. 0.71

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 2.5e-06
   PF13173.1   5 lvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe.llelfleklke.kkkylflDEiqev...............pewedalkslvd..dgrnldviltGsns 99 
                 +++ Gp ++GKt+l+k +a e      +l ++    e++ l ++e +++++++++++    ++flDE+  v                ++++++ +  d  ++++ +v++ Gs +
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGG--ATFLSVDASAIENKWLGESEkNAKAVFTLARRlAPCVVFLDEVDSVlssrehgddsshgtlTSVKTTIMQEWDglRTTKDRVVVIGSTN 198
                 7899**************98888..8888888888877555554456677777744447788*******998888888888876663333333333333322334777777765 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       5.5   2.8e+03      47      84 ..      15      66 ..       8      81 .. 0.65
   2 !   16.4   0.3   1.6e-05    0.0083      25      46 ..      86     107 ..      73     178 .. 0.81
   3 ?   -0.6   0.0       2.6   1.3e+03      36      89 ..     174     222 ..     167     289 .. 0.63

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 5.5
   PF13191.1 47 illerlrfaagkfdqllrn............lpysaiiqa..lrellrqllt 84
                i + r+++aa   d ++r             ++y +i  +  ++ellrq++t
  MMETSP1325-20131115|2059_1 15 ISRTRAEVAALAQDKHERAlvsnviapqdigVSYDHIGGLeqVKELLRQCIT 66
                5566666666666666666655665555555555555555778888888776 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 1.6e-05
   PF13191.1  25 lllvtGpsGiGKSsLlrelakp 46 
                  +l+ Gp+G+GK+ L++++a++
  MMETSP1325-20131115|2059_1  86 GVLLFGPPGTGKTMLAKAVATE 107
                 79****************5543 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 2.6
   PF13191.1  36 KSsLlrelakpillerlrfaagkfdqllrnlpysaiiqa.lrellrqlltelaae 89 
                 K+++++e     + ++lr +  +++ ++   +  ++++a lr + r++l  l ++
  MMETSP1325-20131115|2059_1 174 KTTIMQE-----W-DGLRTTKDRVVVIGSTNRPFDLDEAvLRRMPRRILVDLPDA 222
                 6666666.....4.56666666666666664444444445666666666555544 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   5.9e-06     0.003       6      35 ..      87     119 ..      83     133 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 5.9e-06
   PF13479.1   6 vliYGkpGiGKTslaktl...pktlfldleaga 35 
                 vl++G+pG+GKT lak +   + + fl+++a+a
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVateGGATFLSVDASA 119
                 799**************99999999*****993 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.5e-05    0.0078       2      39 ..      87     124 ..      86     143 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.5e-05
   PF13521.1   2 ivitGgpstGKTtlleaLaargypvvpEvarevleekl 39 
                 + ++G+p+tGKT l++a+a +g  ++  v    +e+k+
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGGATFLSVDASAIENKW 124
                 6899***************9988887777777776666 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.7   2.3e-05     0.011      10      32 ..      85     105 ..      79     110 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 2.3e-05
   PF13245.1  10 npllvvtGgPGtGKTttlaaiia 32 
                  ++ ++ G+PGtGKT  la+++a
  MMETSP1325-20131115|2059_1  85 KGV-LLFGPPGTGKT-MLAKAVA 105
                 355.459********.8888876 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.8e-05    0.0093      50      88 ..      84     120 ..      76     152 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.8e-05
   PF06068.8  50 GravLlaGppgtGktalaiaiskelgedvpfvalsgsev 88 
                  ++vLl GppgtGkt la a++ e g    f ++ +s +
  MMETSP1325-20131115|2059_1  84 VKGVLLFGPPGTGKTMLAKAVATEGG--ATFLSVDASAI 120
                 589*******************9987..56777777765 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0     3e-05     0.015      20     139 ..      87     314 ..      69     357 .. 0.63

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3e-05
   PF13086.1  20 tliqGpPgtGKtttivelisql.....................................................................lsek..seseakkkkrvLvcapsna..avDeilerlle....ldeegkkynpkivRigneaekihedlksvsleekleqklaee..........kaallkeiseeleelkeklek........................e 139
                  l+ GpPgtGKt ++++++                                                                        +      +  +++k rv v +++n    +De ++r +     +d    +++ +i+R+   ++++ +d++   + ++l+    ++          ++a+ ++++ e+++ ++   +                         
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKT-MLAKAVATEggatflsvdasaienkwlgeseknakavftlarrlapcvvfldevdsvlssrehgddsshgtltsvkttI--MqeWDGLRTTKDRVVVIGSTNRpfDLDEAVLRRMPrrilVDLPDATTREEILRVSMAKNRMAPDVNLTAIARQLDGYTGSDikevcreavvHIAHEQAMRLEQRDARARGADmgsgaaggmdaevaegelgvlrpvM 314
                 6999********.3334333335778888899999999999988888888888888888888888888887777777666666666555551..04455668888888888888874456777777666677777778888888888888886667777777766666655533355555444443333333444444333333336666666666666666666665553 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.1e-05     0.015       1      28 [.      87     117 ..      87     230 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.1e-05
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl...gdvlrd 28 
                 +l+ G+pG+GKt lak+ a ++     ++  
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGgatFLSVDA 117
                 7899***************998444333333 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0     4e-05      0.02      20      66 ..      82     125 ..      73     216 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4e-05
                 TS-S-EEEE-------HHHHHHHHHTSTTTTS--EEEETTTS-HHHH CS
  PF00158.21  20 ktdltvlitGesGtGKellAraiheaskrkkkpfvavncaaipeeLl 66 
                 +    vl+ G  GtGK++lA+a+ ++     + f++v+ +ai+++ l
  MMETSP1325-20131115|2059_1  82 EAVKGVLLFGPPGTGKTMLAKAVATEG---GATFLSVDASAIENKWL 125
                 455679***************997654...58899999999966533 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   0.00025      0.12      36      54 ..      87     105 ..      72     123 .. 0.87
   2 ?    3.2   0.0     0.085        43     134     184 ..     136     193 ..     127     197 .. 0.73
   3 ?   -2.2   0.1       4.1   2.1e+03      86     132 ..     208     250 ..     201     289 .. 0.54

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00025
   PF13481.1  36 tllaGapgtGKStlalqla 54 
                 +ll+G+pgtGK++la + a
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVA 105
                 689***********98766 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.085
   PF13481.1 134 laaieelegpdlvviDtlsrlvgg...densnsd....v.gaviaalerlakrtgaavl 184
                   ++++l  p +v +D +++++++   +++s+++    v + ++++++ l+++++  v+
  MMETSP1325-20131115|2059_1 136 FTLARRL-APCVVFLDEVDSVLSSrehGDDSSHGtltsVkTTIMQEWDGLRTTKDRVVV 193
                 5556664.59************9955444444448887579999999999888886665 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 4.1
   PF13481.1  86 lrrrlsailaaldd.penlllvslagvgslrltaddrrdalltadler 132
                 lrr  ++il +l+d + ++ ++   ++ ++r+    ++d  lta+ ++
  MMETSP1325-20131115|2059_1 208 LRRMPRRILVDLPDaTTREEILR-VSMAKNRM----APDVNLTAIARQ 250
                 55555555555544233333332.22211121....122223333333 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   0.00013     0.066      18      41 ..      83     106 ..      73     111 .. 0.83
   2 ?   -3.4   0.0       8.1   4.1e+03     116     130 ..     140     154 ..     137     157 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00013
  PF02562.11  18 kndivfaiGpaGtGKTylavalav 41 
                 + + v+++Gp GtGKT+la a+a 
  MMETSP1325-20131115|2059_1  83 AVKGVLLFGPPGTGKTMLAKAVAT 106
                 4566899************99996 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 8.1
  PF02562.11 116 rTLddafvilDEaqn 130
                 r L+ ++v+lDE+  
  MMETSP1325-20131115|2059_1 140 RRLAPCVVFLDEVDS 154
                 6688899*****865 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   0.00016     0.083      17      50 ..      85     117 ..      76     123 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00016
   PF06414.7  17 kavllgGqpGAGKtslaellleelaagnivrida 50 
                 k vll G+pG GKt la+++  e  +  ++ +da
  MMETSP1325-20131115|2059_1  85 KGVLLFGPPGTGKTMLAKAVATEG-GATFLSVDA 117
                 679*****************9997.777777765 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   0.00039       0.2       3      22 ..      87     106 ..      85     111 .. 0.90
   2 ?   -1.4   0.0       2.8   1.4e+03      44      68 ..     163     187 ..     120     201 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00039
   PF05729.7   3 vilqGeaGsGKTtLlqklas 22 
                 v+l G++G GKT+L++ +a+
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVAT 106
                 7899************9987 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 2.8
   PF05729.7  44 elsrsknarsladlLfsqlpepaap 68 
                 ++s ++ ++s++++++++++ +  +
  MMETSP1325-20131115|2059_1 163 DDSSHGTLTSVKTTIMQEWDGLRTT 187
                 3333444466666666666655555 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00033      0.17       1      24 [.      87     110 ..      87     155 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00033
  PF00910.17   1 iwlyGpsgeGKStlakeLakallk 24 
                 ++l+Gp+g+GK++lak +a++   
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVATEGGA 110
                 689**************9887555 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1    0.0021       1.1       4      23 ..      87     106 ..      86     119 .. 0.87
   2 ?    0.9   0.0      0.38   1.9e+02     275     320 ..     188     229 ..     130     234 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0021
   PF12846.2   4 tlilGppGsGKSvllkklvl 23 
                 +l++GppG GK++l+k+++ 
  MMETSP1325-20131115|2059_1  87 VLLFGPPGTGKTMLAKAVAT 106
                 589*************9865 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.38
   PF12846.2 275 kfgvgiilatQslsdlppsekakgilnnsttkiilrqddeelar.la 320
                 k  v +i +t  + dl++      +l +++ +i+ +++d+ +++ ++
  MMETSP1325-20131115|2059_1 188 KDRVVVIGSTNRPFDLDEA-----VLRRMPRRILVDLPDATTREeIL 229
                 6677788888888888888.....99999999999998854443354 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00023      0.12      50      84 ..      81     115 ..      21     173 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00023
   PF05673.8  50 glpannvLLwGarGtGKSslvkallneyaeegLrl 84 
                  ++ + vLL+G  GtGK  l ka+ +e  ++ L +
  MMETSP1325-20131115|2059_1  81 AEAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSV 115
                 3344679*****************99988777654 PP

>> PF09336.5  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00041      0.21      21      62 .]     303     347 ..     293     347 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00041
                 -GGGB---.-B-HHHHHHHHHCS--SS-H..HHHHHHHHHHHC-- CS
   PF09336.5  21 eeeklleP.pvtlkDflkalkttkptVsk..eDlekheeFtkefG 62 
                 +e +l +  pv  kDf++al +  ++Vs+  + + ++ e+ + +G
  MMETSP1325-20131115|2059_1 303 AEGELGVLrPVMAKDFQRALDKLSASVSErgKEISRVMEWNELYG 347
                 555555444899****************85569*******99998 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.2    0.0005      0.25      20      43 ..      85     108 ..      72     224 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0005
   PF06745.8  20 rvvlitGepGtGKtifalqFlikg 43 
                 + vl+ G pGtGKt++a+  + +g
  MMETSP1325-20131115|2059_1  85 KGVLLFGPPGTGKTMLAKAVATEG 108
                 3489*************9877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.83u 0.33s 00:00:01.15 Elapsed: 00:00:00.72
# Mc/sec: 1204.84
//
Query:       MMETSP1325-20131115|2062_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 1017.32
//
Query:       MMETSP1325-20131115|2063_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 549.17
//
Query:       MMETSP1325-20131115|2065_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 589.87
//
Query:       MMETSP1325-20131115|2066_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-19   70.5   2.8    2.4e-19   69.6   0.5    2.1  2  PF05071.11 NADH ubiquinone oxidoreductase subunit NDUFA12


Domain annotation for each model (and alignments):
>> PF05071.11  NADH ubiquinone oxidoreductase subunit NDUFA12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   0.5   1.8e-23   2.4e-19       1      60 [.      71     129 ..      71     160 .. 0.86
   2 ?    0.7   0.1     0.048   6.5e+02      51     105 .]     160     218 ..     153     218 .. 0.65

  Alignments for each domain:
  == domain 1    score: 69.6 bits;  conditional E-value: 1.8e-23
  PF05071.11   1 gelvGeDefGNkYYenkkeelkkrrRwviykgkaevdaskvppeWhgWLhhtvdepptee 60 
                 gelvGeD +GN+Y+en  ++ ++++Rwv+y++ +++da+++ppeWhgW+ h+ d+p +++
  MMETSP1325-20131115|2066_1  71 GELVGEDVNGNQYFENL-DYPHGQHRWVEYADIHNYDAASIPPEWHGWMCHMQDAPGSDA 129
                 799**************.*************************************98843 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.048
  PF05071.11  51 htvdeppteeelkkkewekehkenltgteeaYvpkgt..ksler...reaakkd.yeawtP 105
                 + +d+  +++  +k+ ++    +++ ++e++Y+++    ++  +    ++++++ +e w+P
  MMETSP1325-20131115|2066_1 160 YEMDTLLNHTMHRKRGFKIGGIKQMPEEEDKYHKHAGsaQN--KgstGRFESQKgMEFWDP 218
                 56677777777777888888888888999999888753222..234634444333777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 1110.62
//
Query:       MMETSP1325-20131115|2060_1  [L=1208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-22   80.0   0.0    3.5e-22   78.8   0.0    1.7  1  PF00005.22 ABC transporter
      1e-13   51.2   0.7    1.8e-13   50.4   0.5    1.3  1  PF00664.18 ABC transporter transmembrane region
    7.6e-09   34.9   0.0    2.9e-08   33.0   0.0    1.9  1  PF02463.14 RecF/RecN/SMC N terminal domain
     0.0016   18.3   0.1        2.3    8.0   0.0    3.0  3  PF13521.1  AAA domain
  ------ inclusion threshold ------
      0.016   14.9   1.2       0.06   13.0   0.0    2.4  3  PF01935.12 Domain of unknown function DUF87
      0.031   13.8   0.1          5    6.7   0.0    3.4  3  PF07728.9  AAA domain (dynein-related subfamily)
      0.033   14.0   0.0        1.4    8.6   0.0    2.3  2  PF13304.1  AAA domain
      0.053   12.7   0.1       0.95    8.6   0.0    2.3  2  PF13481.1  AAA domain
      0.069   13.1   0.0       0.59   10.1   0.0    2.4  1  PF13401.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.0   2.3e-25   3.5e-22       1     118 []     792     918 ..     792     918 .. 0.94

  Alignments for each domain:
  == domain 1    score: 78.8 bits;  conditional E-value: 2.3e-25
                 HHHHHHHTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--..........----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk..........srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 S+ ++ll ++++p+eg+i +d+ +  l++++++ lr  i  + q+  lf   t+r+n+ +++ e  td+ + +++++ +  +++d+          s +s+LSgGq+qr+a+Ara++++p+++lLDE+t+
  MMETSP1325-20131115|2060_1 792 SSCMALLQRLYDPQEGTILIDD-I-PLQDYDIHFLRsrIVIVDQHTVLF-TATIRDNITYGMGEGVTDEMVIQACKDAKAWDFIDDkpdklltmisSGGSNLSGGQRQRLAIARAMIRRPDVILLDEATS 918
                 677899***************4.4.5677888888888***********.**************99****************99999*****************************************96 PP

>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.5   1.2e-16   1.8e-13      69     259 ..     357     543 ..     349     554 .. 0.89

  Alignments for each domain:
  == domain 1    score: 50.4 bits;  conditional E-value: 1.2e-16
  PF00664.18  69 gqrirkrlfrallrkilglfdsffdknsvGellsrltnDvski.rdglgdklglffqslatfvgglivmfylgwkltlvllailpllilvsavlakilkslqkkeqkayakagavaeEalsgirtVkafggeekeleryekaleeakkagikkaitagllfgftqlisylsyalalwfgtflsvisgelsvg 259
                 g+rir+ + +a+ r++ ++fd+    ns+G l  rl++D++ + ++++g    ++     + v ++iv+++  w l+ v +  +++++ ++++  + ++s+++++     +  +v++E+l+ i+tV+ f++e++   ++  ++ + +    ++  +  l  +f ++++   +al + fg    v sg++s  
  MMETSP1325-20131115|2060_1 357 GSRIRNGVLAAMGRQDYEYFDK----NSTGVLQERLNRDADELgDNLIGFPQEMLEKLTWISVNMYIVYHQCPWGLFTVAIWPVIIMMTFQFFMFRYFRSCEERMRRVGQEGVRVTSEVLRQIKTVRQFAMEPQSAAEFARSNISRHMMVEQVHVVTELARTFVWSLFDSGIALTILFGLPY-VASGQMSTA 543
                 4566666666666666666666....*****************55678888899999999************************************************************************************99999999999999999*****************9988.899998865 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   1.9e-11   2.9e-08     135     215 ..     257     964 ..     135     968 .. 0.72

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 1.9e-11
                 T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEEE--EE.E CS
                 x.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 135 e.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadklvgvtkve 215
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         +LSgG+++ +a+    A  ++++  + llDe  +aLD++n ++v + l++  kn   +vi++r ++++++dk++ v + +
  MMETSP1325-20131115|2060_1 257   964
                  *******96655....56788999999**********************************************9998755 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.8   4.3e+03      17      61 ..     366     408 ..     364     411 .. 0.81
   2 !    8.0   0.0    0.0015       2.3      18      88 ..     459     530 ..     455     552 .. 0.85
   3 !    6.8   0.0    0.0035       5.3       1      22 [.     780     801 ..     780     814 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 2.8
   PF13521.1  17 eaLaargypvvpEvarevleeklakgeealpweedllafaeavle 61 
                 +a+ +++y+++   ++ vl+e l+++ ++l +  +l+ f +++le
  MMETSP1325-20131115|2060_1 366 AAMGRQDYEYFDKNSTGVLQERLNRDADELGD--NLIGFPQEMLE 408
                 45556689999999999999999999998875..79999999987 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0015
   PF13521.1  18 aLaargypvvpEvarevleeklakgeealpweedllafaeavleaqleqeaaa.aaskllfcDrglldtlaY 88 
                 ++ ++g++v+ Ev r++    ++  e ++ +e+ + ++ ++++ +q++  ++  ++  + ++D g+  t+ +
  MMETSP1325-20131115|2060_1 459 RVGQEGVRVTSEVLRQIKTVRQFAMEPQSAAEFARSNISRHMMVEQVHVVTELaRTFVWSLFDSGIALTILF 530
                 566789****************998888888888999******9999887554399*********9998876 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0035
   PF13521.1   1 kivitGgpstGKTtlleaLaar 22 
                 k++++G+ ++GK++ ++ L+++
  MMETSP1325-20131115|2060_1 780 KVALVGATGCGKSSCMALLQRL 801
                 79************99988764 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       2.1   3.3e+03     115     154 ..     120     171 ..     111     246 .. 0.71
   2 ?   13.0   0.0   3.9e-05      0.06      25      59 ..     780     812 ..     778     841 .. 0.79
   3 ?   -1.5   0.0         1   1.6e+03     181     222 ..     915     960 ..     864     963 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2.1
  PF01935.12 115 aaeaqrsvleealeqaka.keekeklssdepveklleelk...........k 154
                 ++++  +v++ +++ + + ++ k  +  d+ v+   e+l            +
  MMETSP1325-20131115|2060_1 120 KRPEASRVYKLLWDDVHKvRTTKYGIAKDDDVNVDMEKLLqrllvhelqkaI 171
                 5556778888888888888777777777777777777777344443333330 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 3.9e-05
  PF01935.12  25 HlAilgsTGsGKSntvavLleellekkgatililD 59 
                  +A +g TG GKS  +a+ l++l+ +++  ++++D
  MMETSP1325-20131115|2060_1 780 KVALVGATGCGKSSCMAL-LQRLY-DPQEGTILID 812
                 689*************95.69999.5555444444 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 1
  PF01935.12 181 ggsf..snsstdliallleklekegkitii..dlsgvdelaqqlvv 222
                 +++   +n++++l+++ l+kl k+g+  +i   ls + ++++ +vv
  MMETSP1325-20131115|2060_1 915 EATSalDNTNETLVQQALDKLMKNGSALVIahRLSTIRDSDKIIVV 960
                 3333467888888999999999998888886777777777776666 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.33     5e+02      31      75 ..     620     673 ..     606     675 .. 0.79
   2 ?    6.7   0.0    0.0033         5       2      25 ..     781     805 ..     780     812 .. 0.83
   3 ?    1.8   0.0      0.11   1.6e+02      60      87 ..     901     929 ..     885     955 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.33
                 E--TT--HHHH---B--.........--------.........G-SEEEEESGG CS
   PF07728.9  31 qltrdtteedlkgrreiangttslvdsplvraar.........egeilvlDEve 75 
                  +  dt+ e+l g+  +++++  ++++  v aa          + e++++++v+
  MMETSP1325-20131115|2060_1 620 DCENDTSIEELEGHCCVNSSRYYRRPARTVAAAPivsgkalysTEETTLIEDVN 673
                 6889***********************999887788766666666666666665 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0033
                 EEEE------HHHHHHHGGGGB.S- CS
   PF07728.9   2 vlLvGppGtgKselaerlaeal.nr 25 
                 v LvG++G+gKs+ + +l +++  +
  MMETSP1325-20131115|2060_1 781 VALVGATGCGKSSCMALLQRLYdPQ 805
                 77*************9999998644 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.11
                 -----.G-SEEEEESGGG---HHHHHHHH CS
   PF07728.9  60 vraar.egeilvlDEveraesevlnsLls 87 
                  ra+  ++++++lDE + a +++ ++L +
  MMETSP1325-20131115|2060_1 901 ARAMIrRPDVILLDEATSALDNTNETLVQ 929
                 4444349**********999999988865 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.053        80       3      46 ..     782     835 ..     781     862 .. 0.64
   2 ?    8.6   0.0   0.00092       1.4     235     272 ..     888     922 ..     863     945 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.053
   PF13304.1   3 viiGpNgsGKSnlLkaldflfr..........delvlglnldrslnvniekipf 46 
                 +++G+ g+GKS+ +  l+ l++            l+ ++++  + ++ i ++  
  MMETSP1325-20131115|2060_1 782 ALVGATGCGKSSCMALLQRLYDpqegtiliddIPLQDYDIHFLRSRIVIVDQHT 835
                 79****************998776555555554444444444444445555555 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00092
   PF13304.1 235 sdlSdGtkrllalltallsalekgsvlliDEpEngLHP 272
                 s+lS G+++ la++ a ++++   +v+l+DE  + L+ 
  MMETSP1325-20131115|2060_1 888 SNLSGGQRQRLAIARAMIRRP---DVILLDEATSALDN 922
                 456******************...*******9999986 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00063      0.95      23      51 ..     765     796 ..     748     815 .. 0.85
   2 ?    1.3   0.1      0.11   1.7e+02     126     176 ..     890     936 ..     828     948 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00063
   PF13481.1  23 dwlvkg...llprgsltllaGapgtGKStlal 51 
                 +++++g   ++ +g+ ++l+Ga+g+GKS+ ++
  MMETSP1325-20131115|2060_1 765 TPVLQGmsfVVEPGQKVALVGATGCGKSSCMA 796
                 566666666789****************9875 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.11
   PF13481.1 126 ltadlerllaaieel.egpdlvviDtlsrlvggdensnsdvgaviaalerla 176
                 l +  ++ la ++++ ++pd++ +D ++++++  + +++    v +al++l 
  MMETSP1325-20131115|2060_1 890 LSGGQRQRLAIARAMiRRPDVILLDEATSALD--NTNET---LVQQALDKLM 936
                 3333334444444442679******9988886..33333...4444444444 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00039      0.59       7     104 ..     781     924 ..     776     951 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00039
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae..............karvvfveapastspkellqkllsalglpakg.................................rltteellealqealrrrrtrlliiDEaqr.Lseeal 104
                 ++++G +G+GK+ ++  l r +d ++ +                ++r+v v+        +++ ++   +g++  +                                     ++ + a+++a+ rr   ++++DEa   L +++ 
  MMETSP1325-20131115|2060_1 781 VALVGATGCGKSSCMALLQRLYDPQEGTILiddiplqdydihflRSRIVIVDQHTVLFTATIRDNITYGMGEGVTDemviqackdakawdfiddkpdklltmissggsnLSGGQRQRLAIARAMIRRPD-VILLDEATSaL-DNTN 924
                 5799****************9976555554999999999888885555555554444555555555555555555555555555666677777777777777766665544445555556666666666.99999998855.2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       727  (0.0531744); expected 273.4 (0.02)
Passed bias filter:                      448  (0.0327677); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.86u 0.35s 00:00:02.21 Elapsed: 00:00:00.93
# Mc/sec: 3112.69
//
Query:       MMETSP1325-20131115|2067_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-09   37.0   0.0    5.7e-09   35.4   0.0    1.8  2  PF00085.15 Thioredoxin
    6.5e-05   23.3   0.4    0.00012   22.5   0.3    1.6  1  PF07749.7  Endoplasmic reticulum protein ERp29, C-terminal domain
  ------ inclusion threshold ------
      0.022   14.8   0.1       0.16   12.0   0.0    2.3  2  PF13098.1  Thioredoxin-like domain
      0.043   13.0   0.3      0.054   12.6   0.2    1.2  1  PF03238.8  ESAG protein
      0.043   13.4   0.0      0.055   13.1   0.0    1.3  1  PF13848.1  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   2.1e-12   5.7e-09      45     103 ..      59     123 ..      51     124 .. 0.84
   2 ?   -1.9   0.0      0.88   2.4e+03      50      69 ..     165     184 ..     147     186 .. 0.66

  Alignments for each domain:
  == domain 1    score: 35.4 bits;  conditional E-value: 2.1e-12
                 HHTT-..TSEEEEEETTTT..HHHHHHTT--SSSEEEEESSSSEEE..EE---.-HHHHHHHHHH CS
  PF00085.15  45 eelke..kvvlakvdvden..kdlaseygvegiPtlklfkngkkve..evegarekeklvaflkk 103
                 +e+++  +vv+a vd+++   kd++++ gv+g+Pt+k+f ++  +e   ++gar+ ++l++f+k+
  MMETSP1325-20131115|2067_1  59 DEFADstSVVVADVDCTTDggKDVCNDAGVRGYPTIKYFTAETGAEgeAYNGARSYDALEKFVKE 123
                 44444556********977669*****************987777767**************987 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.88
                 TSEEEEEETTTTHHHHHHTT CS
  PF00085.15  50 kvvlakvdvdenkdlaseyg 69 
                  ++ ak+ +d+++ +a+++ 
  MMETSP1325-20131115|2067_1 165 GMMSAKMSADKKQWMAKRLA 184
                 56667888888887777765 PP

>> PF07749.7  Endoplasmic reticulum protein ERp29, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.3   4.4e-08   0.00012      50      93 ..     145     188 ..     107     189 .] 0.87

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 4.4e-08
                 HHHHHH---CHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHT CS
   PF07749.7  50 mekilkkgaeyvekElkRLekllkgklaaekkdeltkrlNiLss 93 
                 ++k+++k++  +ekE++RL+ +++ k++a+kk+ + krl iL++
  MMETSP1325-20131115|2067_1 145 ITKMSAKDKADIEKEVTRLSGMMSAKMSADKKQWMAKRLAILKQ 188
                 57899999999*******************************86 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.9e-05      0.16      72     111 ..      80     120 ..      15     121 .. 0.77
   2 ?    0.5   0.0      0.22   6.1e+02      94     107 ..     158     171 ..     128     185 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.9e-05
   PF13098.1  72 kelgrklgvrgtPtivfldge.GklvarlpGylpaeelekl 111
                 k+  +  gvrg Pti ++ +e G +   ++G+ + + lek+
  MMETSP1325-20131115|2067_1  80 KDVCNDAGVRGYPTIKYFTAEtGAEGEAYNGARSYDALEKF 120
                 46778889*******9887544999999**********997 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.22
   PF13098.1  94 klvarlpGylpaee 107
                 k+v+rl+G+++a++
  MMETSP1325-20131115|2067_1 158 KEVTRLSGMMSAKM 171
                 56667777777664 PP

>> PF03238.8  ESAG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2     2e-05     0.054      58     147 ..      61     153 ..      23     167 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2e-05
   PF03238.8  58 iaeitrtvWddvkaveasgkakCeeqkveg...vkeleteCgdhtCpladkvsesalkkykdgclevnvlngsvseClnlprdnlyksgavks 147
                  a+ t  v  dv+  +  gk  C++  v+g   +k +++e g++   ++   s +al+k+ ++ lev+   +  seC ++++  + k +a ++
  MMETSP1325-20131115|2067_1  61 FADSTSVVVADVDCTTDGGKDVCNDAGVRGyptIKYFTAETGAEGEAYNGARSYDALEKFVKEKLEVQCDITNPSECDEKEQGYITKMSAKDK 153
                 477789999*******99*******9998644489999*******************************999*****9999988888777654 PP

>> PF13848.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     2e-05     0.055      30      75 ..      79     125 ..      52     168 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2e-05
                 -HHHHHHTT---.--EEEEET.TTTEEEEE-HHT--HHHHHHHHHHH- CS
   PF13848.1  30 ekevakklgike.pkvllfrk.fdekrvkydgekltvddlkkfiekns 75 
                  k+v+++ g++  p+++ f + +  + + y+g+  ++d+l+kf++++ 
  MMETSP1325-20131115|2067_1  79 GKDVCNDAGVRGyPTIKYFTAeTGAEGEAYNGA-RSYDALEKFVKEKL 125
                 699****************986777999****9.9**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 905.82
//
Query:       MMETSP1325-20131115|2069_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       548  (0.0400819); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|2069_2  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.8   0.5       0.21   11.4   0.4    1.1  1  PF14426.1 Immunity protein Imm2


Domain annotation for each model (and alignments):
>> PF14426.1  Immunity protein Imm2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.4   1.6e-05      0.21      30      48 ..      14      32 ..      11      34 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.6e-05
   PF14426.1 30 LkeikLdnlLkdvpedEae 48
                L e +Ld ++++v+e+Eae
  MMETSP1325-20131115|2069_2 14 LAEVELDRVVEEVAEEEAE 32
                8899**************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|2064_1  [L=800]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-83  279.3   0.0    4.6e-83  278.9   0.0    1.2  1  PF00724.15 NADH:flavin oxidoreductase / NADH oxidase family
      2e-13   50.5   3.8    3.2e-12   46.6   0.7    2.5  2  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
      5e-13   49.4   1.8    6.3e-06   26.2   0.0    3.4  3  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
    1.4e-10   41.2   4.7    2.6e-05   24.3   0.7    4.9  3  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
      3e-09   36.6   1.2    5.6e-09   35.7   0.2    2.0  2  PF13450.1  NAD(P)-binding Rossmann-like domain
    1.3e-07   30.9   0.1    4.3e-07   29.2   0.0    1.8  2  PF12831.2  FAD dependent oxidoreductase
    4.5e-06   25.6   2.4    4.5e-06   25.6   1.7    1.9  3  PF00890.19 FAD binding domain
    8.3e-06   24.8   0.6    8.3e-06   24.8   0.4    3.4  3  PF01266.19 FAD dependent oxidoreductase
    1.4e-05   23.6   3.1    1.6e-05   23.4   0.6    2.2  3  PF03486.9  HI0933-like protein
     0.0001   20.5   0.6      0.008   14.3   0.1    2.1  2  PF00743.14 Flavin-binding monooxygenase-like
    0.00012   20.9   0.2    0.00024   19.9   0.2    1.4  1  PF01134.17 Glucose inhibited division protein A
     0.0012   18.5   0.3       0.25   10.9   0.0    2.5  2  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
     0.0013   18.3   1.5       0.32   10.5   0.1    2.5  2  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
     0.0015   17.4   0.1      0.014   14.1   0.0    2.4  3  PF13434.1  L-lysine 6-monooxygenase (NADPH-requiring)
     0.0062   15.5   0.9      0.018   13.9   0.1    2.2  2  PF01946.12 Thi4 family
  ------ inclusion threshold ------
      0.033   13.1   2.7       0.46    9.3   0.2    2.9  3  PF01494.14 FAD binding domain
       0.06   13.7   0.3       0.21   12.0   0.0    2.0  1  PF01188.16 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
       0.06   12.6   0.1        0.3   10.3   0.0    2.0  2  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
      0.094   12.5   4.8        1.9    8.3   0.3    3.5  3  PF13460.1  NADH(P)-binding
       0.18   10.7   2.3       0.11   11.4   0.1    1.7  2  PF01593.19 Flavin containing amine oxidoreductase
       0.24   10.8   3.3        0.1   12.0   0.3    1.8  2  PF01262.16 Alanine dehydrogenase/PNT, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00724.15  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  278.9   0.0   7.1e-86   4.6e-83       4     341 .]      33     361 ..      30     361 .. 0.93

  Alignments for each domain:
  == domain 1    score: 278.9 bits;  conditional E-value: 7.1e-86
                 S-EEETT.EEESSSEEE---.---TTCT---B-HCHHHHHHHHHHH----EEE-SEEESSTTS-TTTT-EE-SSGGGHHHHHHHHHHHHHTT-EEE-EEE-----S-CCCCCCECECS-CSSSSSCTCCCTT--EEE--HHHHHHHHHHHHHHHHHHHH----EEEEEE-TT-HHHHHHSTTT----S-----HHHHCHHHHHHHHHHHHH---TSEEEEEEES---STT---HHHHHHHHHHHHCCCCCEEE...EETTSSS.CCCTTT-SSTTCCCCH--HHHHHCHHHHHSSBEEEESS-TTHHHHHHHHHHSTTSEEEESCHHHH-TTHHHHHHHHTGGG CS
  PF00724.15   4 kPikign.ltLknRivmapm.trlrasedgtvpedllveyysqRakggvtliiteavavspksggfenqpglyddeqveqwkklteavhengskvvvqlwhlGreakaeyredaedgpsdpvaleasekvagnelkeltkeeIkeiikefveAAkrAveAgfDgVeihgahgYLldqFlspksNkrtDeyGGSlenRaRFllevveavkeavgedrpvglRlspdevvekgktlaetaqkiellkelgkrvkd...gkrlali.elaeprktkafsveveqevknaekikkvvkipvitvGrindpevaaeiveegkadlvaigRefladPdlvkkvkegrede 341
                 +P++++   tL nR++m++m t l+++++g+  +  ++++y +Rakgg++li+t ++a+s ++   + ++ l ++++ve ++++t avh+++sk+ +q++h Gr+    y + +  +ps     +a++       ++l+  ++  +i+++++ A+ A++Ag+DgVei+g++gYL++qF+  ++NkrtDe+GGS+enR RF+ e+v++ + avg+d+++++Rls+ + ve+g+t +et+q +++l++ g+++ +   g+++a+i ++a+ + ++afs+ ++    +++    +   p+ t++rin pe+a+ i+++g+adl++++R+fladP+ v+k++egrede
  MMETSP1325-20131115|2064_1  33 SPLELRCgITLANRVIMGSMhTGLEEAHNGSLHK--MAAFYEARAKGGCGLIVTGGIAPSREGWVSPFAAKLTTKAEVEPHREVTAAVHQYDSKILMQILHSGRYG---YHPLNV-APS---PIKAPIG--WFTPRALSSADVSRTIDDYARSAALAKDAGYDGVEIMGSEGYLINQFIASRTNKRTDEWGGSFENRSRFATEIVKRTRAAVGDDFAIMFRLSMLDLVEGGSTWEETVQLAKALEDEGVDIINtgiGWHEARIpTIATSVPRGAFSWVTR----KLKDEGVLEHTPLCTTNRINLPETAESILQQGDADLISMARPFLADPEIVNKAAEGREDE 361
                 688888769***********999999***97766..********************************************************************98...777777.666...5555544..22458**************************************************************************************************************99987643338******99999***********9....7888889999***********************************************996 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.7   4.9e-15   3.2e-12       1     172 [.     408     574 ..     408     581 .. 0.82
   2 !   12.5   0.1   0.00013     0.086       1     120 [.     531     669 ..     531     679 .. 0.74

  Alignments for each domain:
  == domain 1    score: 46.6 bits;  conditional E-value: 4.9e-15
                 SEEEE----HHHHHHHHHHHTTSEEEEECSSSSSTBTSGGHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCTCEEEHCHEEEEEETTTTEEEEEEEEEEEEEETEEEEEEESEEEE----B----TGCCHTEEEC.SSHHHHHHHHHHCSTTTEEEEE-........................-GGGCHHSS--BES CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxx RF
   PF07992.9   1 dvviiGgGpaGlsaakdlaqkglkvaliekeggtcvnrgclpkkllvevaegreeleelalkvvdelekagieilleknvvkidsgskkvvqeagavkadekgkgrdikydklviAtGarprtlgipgvevailargvedsdeilellekpkkvvvvG........................tkllaekagveldp 172
                 +v+++GgG aGl+a+ ++a +g++v+l+e++g+    +g+  +++ v  +e+++e     +++ ++l++ g+++ l+++v+  d  ++                     yd++v+AtG  pr++ ipg ++    + + +sd +       k+v+v+G                        t+ + +++gv+++ 
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASGE---IGGQFNYAKVVPGKEEFHET---IKYFNHRLDRSGVDLKLNTRVTAEDLIAG--------------------GYDRVVVATGVVPRVPSIPGIDH--P-KVMLYSDVLGGAPVPGKSVAVIGaggigfdiaeflthddshaatsldTAAFMKEWGVDMSN 574
                 69**************************99997...67777777777766666553...347888999******99999999999988....................5*******************633..2.34666665555555555***********************999998866666999999954 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 0.00013
                 SEEEE----HHHHHHHHHH......HTTSEEEEE...CSSSSSTBTSGGHHHHHHHHHHHHHHHHHHTSH...........HHHHH..HHHCTCEEEHCHEEEEEETTTTEE.EEEEEEEEEEEETEEEEEEESEEEE----B CS
                 xxxxxxxxxxxxxxxxxxx......xxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxx..xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9   1 dvviiGgGpaGlsaakdla......qkglkvali...ekeggtcvnrgclpkkllvevaegreeleelal...........kvvde..lekagieilleknvvkidsgskkv.vqeagavkadekgkgrdikydklviAtGar 120
                 +v++iG+G  G   a++l          l++a +   ++ + ++  rg+l++++  + a+++  l+++ +           +++++  l+++ +++  + + vk+d +  ++ v+++++    e + ++ + +d++v++ G +
  MMETSP1325-20131115|2064_1 531 SVAVIGAGGIGFDIAEFLThddshaATSLDTAAFmkeWGVDMSNATRGGLLEPKHSAPAREVFLLQRK-KgalgtglgkttGWIHRatLRNKAVKMVSGVEYVKVDDEGLHIkVHPKKKG---EPAVEQVLDVDHVVVCAGQE 669
                 599****************98777766677777799988888999*********98888888777653.358*********666551155666666566777777666555564444333...3344678***********87 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2   6.8e-07   0.00044       1      41 [.     410     449 ..     410     467 .. 0.90
   2 !   26.2   0.0   9.7e-09   6.3e-06     125     188 ..     487     550 ..     452     563 .. 0.77
   3 ?   -0.7   0.0       1.7   1.1e+03      99     136 ..     623     668 ..     610     692 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 6.8e-07
   PF13738.1   1 lVvGAGaaGlafadnlleegatpliivDrnakpGghwlkay 41 
                 +VvG+G aGla+ +++ e+g + + +++++ ++Gg++++a 
  MMETSP1325-20131115|2064_1 410 AVVGGGCAGLAASCTAAERGHD-VTLFEASGEIGGQFNYAK 449
                 6*********************.**************9764 PP

  == domain 2    score: 26.2 bits;  conditional E-value: 9.7e-09
   PF13738.1 125 vr..akalvlatgavskpktlglpgsadk.eavhleevlepedlkgkrvvVvGgghsAidallnLld 188
                 +   ++++v+atg+  +p+++++pg  d+ +++ +++vl  +  +gk+v+V+G+g  ++d+++ L +
  MMETSP1325-20131115|2064_1 487 IAggYDRVVVATGV--VPRVPSIPG-IDHpKVMLYSDVLGGAPVPGKSVAVIGAGGIGFDIAEFLTH 550
                 335589*******7..9********.6664888999**************************99976 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1.7
   PF13738.1  99 vrlstrvteveregdrfevrvtdg........revrakalvlatga 136
                 v+  + v++v+ ++++ +++v+ +        + ++ +++v++ g 
  MMETSP1325-20131115|2064_1 623 VKMVSGVEYVKVDDEGLHIKVHPKkkgepaveQVLDVDHVVVCAGQ 668
                 6667789999999999999997766789999666669999999994 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.7     4e-08   2.6e-05       1      65 [.     408     483 ..     408     499 .. 0.80
   2 !   10.1   0.0    0.0011      0.74       1      21 [.     531     551 ..     531     576 .. 0.89
   3 ?    2.8   0.0      0.22   1.4e+02      23      75 ..     590     641 ..     584     649 .. 0.87

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 4e-08
                 EEEEE---HHHHHHHHHHHHTTSEEEEEESSSSSSTTSS...........HHHHHHHHHHHHHTTEEEETTEEEEE CS
  PF00070.22   1 rvvvvGGGyiGlElAaalaklgkkVtvierrdrllrald...........eeiakilqkklekngievllntkvee 65 
                 +v+vvGGG  Gl + +++a+ g++Vt++e++ ++  +++           +e  k++ ++l + g++++lnt+v++
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASGEIGGQFNyakvvpgkeefHETIKYFNHRLDRSGVDLKLNTRVTA 483
                 69********************************977775555555544456677778888888888888888876 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.0011
                 EEEEE---HHHHHHHHHHHHT CS
  PF00070.22   1 rvvvvGGGyiGlElAaalakl 21 
                 +v+v+G+G iG + A++l++ 
  MMETSP1325-20131115|2064_1 531 SVAVIGAGGIGFDIAEFLTHD 551
                 69****************864 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.22
                 SEEEEEESSSSSS.TTSSHHHHHHHHHHHHHTTEEEETTEEEEEEEESEEEEEE CS
  PF00070.22  23 kkVtvierrdrll.raldeeiakilqkklekngievllntkveeiegsadgvev 75 
                  +V +++r++  l  +l+++ + i +  l+++ ++++ + + +++++++ +  +
  MMETSP1325-20131115|2064_1 590 REVFLLQRKKGALgTGLGKTTGWIHRATLRNKAVKMVSGVEYVKVDDEGLH--I 641
                 589999*******9***************************9999966544..4 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.2   8.6e-12   5.6e-09       1      42 [.     411     453 ..     411     472 .. 0.84
   2 ?   -2.9   0.0       9.8   6.4e+03       1      17 [.     534     550 ..     534     560 .. 0.79

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 8.6e-12
   PF13450.1   1 IvGaGlsGlvaAylLakagkdvlvlekrdrlGGraasvev.dg 42 
                 +vG+G++Gl+a + +a++g+dv+++e+  ++GG+    +v +g
  MMETSP1325-20131115|2064_1 411 VVGGGCAGLAASCTAAERGHDVTLFEASGEIGGQFNYAKVvPG 453
                 8*********************************987766655 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 9.8
   PF13450.1   1 IvGaGlsGlvaAylLak 17 
                 ++GaG  G  +A +L+ 
  MMETSP1325-20131115|2064_1 534 VIGAGGIGFDIAEFLTH 550
                 89999999888888875 PP

>> PF12831.2  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   6.6e-10   4.3e-07       2      41 ..     409     448 ..     408     482 .. 0.90
   2 ?   -1.5   0.0       1.4   9.1e+02     310     341 ..     547     578 ..     545     593 .. 0.82

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 6.6e-10
   PF12831.2   2 vvVvGGgpaGvaAAiaAarlGakvlLverrgvlGGmltsg 41 
                 v+VvGGg+aG+aA  +Aa +G +v+L e +g +GG++  +
  MMETSP1325-20131115|2064_1 409 VAVVGGGCAGLAASCTAAERGHDVTLFEASGEIGGQFNYA 448
                 89*********************************98655 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1.4
   PF12831.2 310 vlteedvlegrkfpDsialgaypiDlhnpqgg 341
                  lt++d  ++++ + + ++ ++++D+ n+++g
  MMETSP1325-20131115|2064_1 547 FLTHDDSHAATSLDTAAFMKEWGVDMSNATRG 578
                 68999**9*******************99998 PP

>> PF00890.19  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   1.7   6.9e-09   4.5e-06       2      41 ..     409     448 ..     408     450 .. 0.95
   2 ?   -4.0   0.0       6.5   4.2e+03     140     175 ..     458     498 ..     456     503 .. 0.63
   3 ?   -3.4   0.0       4.4   2.9e+03      91     150 ..     560     639 ..     555     647 .. 0.56

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 6.9e-09
                 EEEE-------HHHHHHHCHTT-EEEE-SS-CCGSGGGG- CS
  PF00890.19   2 vvViGsGlAGlaAAleaaeaglkvavvekeqetggataws 41 
                 v V+G+G AGlaA+ +aae+g++v++ e+ +e gg+  ++
  MMETSP1325-20131115|2064_1 409 VAVVGGGCAGLAASCTAAERGHDVTLFEASGEIGGQFNYA 448
                 89*********************************98877 PP

  == domain 2    score: -4.0 bits;  conditional E-value: 6.5
                 -HHHHHHHHHHHC-T.TEEEE-SEEEEE--BG--.....BB- CS
  PF00890.19 140 hallarllesareag.kvdfqerhradeLivedg.....rvt 175
                 h+ ++ + +++++ g ++++ +r  a++Li   g     ++t
  MMETSP1325-20131115|2064_1 458 HETIKYFNHRLDRSGvDLKLNTRVTAEDLIAG-GydrvvVAT 498
                 56677777788777777777888888888873.234343334 PP

  == domain 3    score: -3.4 bits;  conditional E-value: 4.4
                 HHHHHHHC------B.....................GC---B-EE------S--EE-.STT-......---HHHHHHHHHH CS
  PF00890.19  91 eavdeleelgvpfsr.....................tedgpvdlrelGglsatrtlhdaadarretlvtghallarllesa 150
                 +  ++++e+gv++s+                     ++++   ++ lG+++ + +++ +++++ +++v+g + +++  e++
  MMETSP1325-20131115|2064_1 560 DTAAFMKEWGVDMSNatrggllepkhsaparevfllQRKKGALGTGLGKTTGW-IHRATLRNKAVKMVSGVEYVKVDDEGL 639
                 56678888888888854444444444333333333322225556666666666.444455554477777777777766666 PP

>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.4   1.3e-08   8.3e-06       1      35 [.     408     443 ..     408     455 .. 0.94
   2 ?   -0.5   0.3      0.59   3.9e+02       2      20 ..     532     550 ..     531     564 .. 0.85
   3 ?   -1.1   0.0      0.92     6e+02     150     200 ..     610     667 ..     565     669 .. 0.69

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 1.3e-08
                 EEEEE----HHHHHHHHHHHTT-EEEEEESS.STTS CS
  PF01266.19   1 dvviiGgGivGlstAyeLarrglkVtllekg.dias 35 
                 +v+++GgG +Gl++   +a+rg++Vtl+e++ +i++
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASgEIGG 443
                 59****************************999987 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.59
                 EEEE----HHHHHHHHHHH CS
  PF01266.19   2 vviiGgGivGlstAyeLar 20 
                 v++iG+G +G  +A +L+ 
  MMETSP1325-20131115|2064_1 532 VAVIGAGGIGFDIAEFLTH 550
                 89********999988876 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 0.92
                 HHHHHHHHHHG-.-EEEESEEEEEEEEETTCEE.EEEEES........EEEEEEEE--- CS
  PF01266.19 150 vkalaraaeelG.veiiegtkVtglereggrvsgvetedg.......siradkvvlAaG 200
                 + ++ ra  ++  v++++g++ ++++ eg +++ v+ +++        ++ d+vv++aG
  MMETSP1325-20131115|2064_1 610 TGWIHRATLRNKaVKMVSGVEYVKVDDEGLHIK-VHPKKKgepaveqVLDVDHVVVCAG 667
                 445555555554477777766666666666666.5554443443322344499999998 PP

>> PF03486.9  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.6   2.4e-08   1.6e-05       2      39 ..     408     445 ..     407     450 .. 0.92
   2 ?   -1.8   0.0       1.1     7e+02     103     134 ..     452     483 ..     444     496 .. 0.83
   3 ?   -1.8   0.0       1.1     7e+02     165     183 ..     530     548 ..     527     561 .. 0.61

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 2.4e-08
   PF03486.9   2 dviviGgGaAGlmaAisaakrgakVllldkakklgrKi 39 
                 +v+v+GgG AGl a+ +aa+rg++V+l+++  ++g  +
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASGEIGGQF 445
                 79*****************************9999766 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.1
   PF03486.9 103 pvsdkakdivdallkelkeagvkirletevks 134
                 p +++ ++ ++ + ++l+++gv+++l+t+v++
  MMETSP1325-20131115|2064_1 452 PGKEEFHETIKYFNHRLDRSGVDLKLNTRVTA 483
                 5566667789999***************9985 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 1.1
   PF03486.9 165 kSiPklGstgkgyklaeqf 183
                 kS++ +G+ g g+++ae +
  MMETSP1325-20131115|2064_1 530 KSVAVIGAGGIGFDIAEFL 548
                 5555555555555555544 PP

>> PF00743.14  Flavin-binding monooxygenase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   1.2e-05     0.008       3      44 ..     408     449 ..     405     461 .. 0.90
   2 ?    4.5   0.0     0.011       7.2     139     207 ..     491     553 ..     481     570 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-05
  PF00743.14   3 kvaviGaGvsGlasikccleegleptcfersddiGGlwrfke 44 
                 kvav+G+G +Gla+  +  e g + t fe s +iGG +++ +
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASGEIGGQFNYAK 449
                 8*************99999*****************998865 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.011
  PF00743.14 139 fdavmvctGhhvnphlplesfpGiekfkGqyfhsrdykepevfkgkrvlviGlGnsggdiavelsrtae 207
                 +d v+v tG  v p +p  s pGi++ k  ++   d    +   gk v viG G  g dia  l++   
  MMETSP1325-20131115|2064_1 491 YDRVVVATG--VVPRVP--SIPGIDHPKVMLY--SDVLGGAPVPGKSVAVIGAGGIGFDIAEFLTHDDS 553
                 688888888..568888..89****9986554..3556667789*****************98887655 PP

>> PF01134.17  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.2   3.7e-07   0.00024       1      33 [.     408     439 ..     408     467 .. 0.82

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 3.7e-07
                 SEEEE-------HHHHHHHH----EEEEES-GG CS
  PF01134.17   1 dviViGgGhAGceAAlaaarlGakvlLithkld 33 
                 +v V+GgG AG++A+ +aa++G++v+L+    +
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEA-SG 439
                 699************************943.33 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00039      0.25       1      32 [.     408     439 ..     408     478 .. 0.88
   2 ?    5.1   0.1     0.023        15       1      21 [.     531     551 ..     531     564 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00039
                 EEEEE-------HHHHHHHTTEEEEEEE-S-H CS
  PF01210.18   1 kvavlGaGswGtalAkvlaenghevrlWvree 32 
                 kvav+G+G  G a +   ae+gh+v+l+  + 
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASG 439
                 89*************************98765 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.023
                 EEEEE-------HHHHHHHTT CS
  PF01210.18   1 kvavlGaGswGtalAkvlaen 21 
                 +vav+GaG +G  +A  l+  
  MMETSP1325-20131115|2064_1 531 SVAVIGAGGIGFDIAEFLTHD 551
                 59*************999865 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   0.00049      0.32       1      32 [.     408     439 ..     408     463 .. 0.93
   2 !    6.5   0.1    0.0078       5.1       1      21 [.     531     551 ..     531     580 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00049
                 EEEEE---------HHHHHCT.SEEEEE-S-H CS
  PF02737.13   1 kvaVvGaGtmGagiAavfaragleVvlvdise 32 
                 kvaVvG G  G      +a++g++V+l++ s 
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASG 439
                 79*************************99875 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0078
                 EEEEE---------HHHHHCT CS
  PF02737.13   1 kvaVvGaGtmGagiAavfara 21 
                 +vaV+GaG +G +iA+ + + 
  MMETSP1325-20131115|2064_1 531 SVAVIGAGGIGFDIAEFLTHD 551
                 59*************988765 PP

>> PF13434.1  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.93     6e+02     187     210 ..     403     426 ..     361     438 .. 0.72
   2 !   14.1   0.0   2.2e-05     0.014     144     215 ..     487     554 ..     448     573 .. 0.76
   3 ?   -1.5   0.0       1.2     8e+02     298     338 ..     627     667 ..     613     674 .. 0.51

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.93
   PF13434.1 187 llkkkriavvGsGqSaaeifldll 210
                   kk ++avvG+G  +      ++
  MMETSP1325-20131115|2064_1 403 PGKKIKVAVVGGGCAGLAASCTAA 426
                 5677899******88765555555 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 2.2e-05
   PF13434.1 144 eellarnlvlgtGtepylPealkklegkervfhsseylerkeellkkkriavvGsGqSaaeifldllrrqka 215
                       ++v++tG  p++P++   ++ +++v+  s++l        +k++av+G+G  + +i++ l+++ ++
  MMETSP1325-20131115|2064_1 487 IAGGYDRVVVATGVVPRVPSIPG-ID-HPKVMLYSDVLGGA--PVPGKSVAVIGAGGIGFDIAEFLTHDDSH 554
                 4445578************9876.56.59**********87..79*******************99998554 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 1.2
   PF13434.1 298 pnreveaveaegkgeveltlrneesg...eeetleadavvlATG 338
                 + +e  +v+ e   +++++++ +++g    e+ l++d vv++ G
  MMETSP1325-20131115|2064_1 627 SGVEYVKVDDE---GLHIKVHPKKKGepaVEQVLDVDHVVVCAG 667
                 33333333333...333333333333111456677777777776 PP

>> PF01946.12  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   2.8e-05     0.018      18      54 ..     407     443 ..     395     458 .. 0.92
   2 ?   -2.2   0.1       2.4   1.5e+03      19      40 ..     531     552 ..     529     557 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.8e-05
                 EEEEEE-------HHHHHHHTSTS-EEEEESSS---- CS
  PF01946.12  18 sDvvivGaGssGltaayylakkdlkvailerklsiGG 54 
                   v++vG+G +Gl+a+ + a+++  v+++e++  iGG
  MMETSP1325-20131115|2064_1 407 IKVAVVGGGCAGLAASCTAAERGHDVTLFEASGEIGG 443
                 579*****************************99998 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 2.4
                 EEEEE-------HHHHHHHTST CS
  PF01946.12  19 DvvivGaGssGltaayylakkd 40 
                  v+++GaG  G+  a  l+++d
  MMETSP1325-20131115|2064_1 531 SVAVIGAGGIGFDIAEFLTHDD 552
                 589*********9999998876 PP

>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2    0.0007      0.46       2      32 ..     407     437 ..     406     441 .. 0.90
   2 ?    1.2   0.0      0.21   1.3e+02       3      22 ..     531     550 ..     530     554 .. 0.92
   3 ?    0.4   0.0      0.37   2.4e+02     133     191 ..     628     689 ..     613     726 .. 0.70

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0007
                 ECEEE--------HHHHHHHHH.HHEEEEES CS
  PF01494.14   2 tdVlIVGaGpaGlmlallLseaGvrvvlvek 32 
                 ++V++VG+G aGl ++   +e+G +v+l e 
  MMETSP1325-20131115|2064_1 407 IKVAVVGGGCAGLAASCTAAERGHDVTLFEA 437
                 68**********************9999875 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.21
                 CEEE--------HHHHHHHH CS
  PF01494.14   3 dVlIVGaGpaGlmlallLse 22 
                 +V+++GaG  G+  a +L++
  MMETSP1325-20131115|2064_1 531 SVAVIGAGGIGFDIAEFLTH 550
                 599**************986 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.37
                 ECCSCCCHHHHHHCCCCEE----E...EEEEECEEE-------HCHHHS-GGEEEEEEC-EE CS
  PF01494.14 133 evlsleqdeegvtavvrdketgee...etvrakYlvGaDGgrStvrktlgiefegeetvyea 191
                  v+ ++ d+eg + +v  k++ge    + ++ + +v + G   t+ +++g+++e+ + + + 
  MMETSP1325-20131115|2064_1 628 GVEYVKVDDEGLHIKVHPKKKGEPaveQVLDVDHVVVCAGQEETAGSRVGTRMEAPDPSHTK 689
                 3444577888888888877777644448899**********************998877554 PP

>> PF01188.16  Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00032      0.21       1      42 [.     225     281 ..     225     292 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00032
                 HHHHHHHHSSTCSE.....EEEE-TT-B.HHHHHHHHHHHHGG.........GSEEE CS
  PF01188.16   1 rvravreavgpdvd.....lmvDanggw.tleeAlrlaraled.........iewiE 42 
                 +v++ r+avg+d+       m+D+ +g  t+ee ++la+aled         i w E
  MMETSP1325-20131115|2064_1 225 IVKRTRAAVGDDFAimfrlSMLDLVEGGsTWEETVQLAKALEDegvdiintgIGWHE 281
                 58999***9999988888889998777779***********9767655433335655 PP

>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00046       0.3       2      34 ..     408     440 ..     407     487 .. 0.83
   2 ?   -0.5   0.0      0.97   6.3e+02       2      23 ..     531     552 ..     530     575 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00046
                 EEEEE------------TTT---EEE---S-HH CS
   PF03721.9   2 kiaviGlGYvGlptavvlaekghevvgvDinee 34 
                 k+av+G G  Gl ++ + ae+gh+v++++ + e
  MMETSP1325-20131115|2064_1 408 KVAVVGGGCAGLAASCTAAERGHDVTLFEASGE 440
                 8*************************9987755 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.97
                 EEEEE------------TTT-- CS
   PF03721.9   2 kiaviGlGYvGlptavvlaekg 23 
                  +aviG+G +G   a  l +  
  MMETSP1325-20131115|2064_1 531 SVAVIGAGGIGFDIAEFLTHDD 552
                 59*********99998887765 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.3     0.003       1.9       1      33 [.     409     440 ..     409     503 .. 0.89
   2 ?    4.1   0.0     0.057        37       1      28 [.     532     559 ..     532     565 .. 0.89
   3 ?   -1.4   0.0       2.7   1.7e+03      56      73 ..     654     671 ..     614     698 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.003
   PF13460.1   1 IaviGAtGktGrrivkellarghevtalvRnps 33 
                 +av+G+ G +G +    +++rgh+vt++  + +
  MMETSP1325-20131115|2064_1 409 VAVVGG-GCAGLAASCTAAERGHDVTLFEASGE 440
                 79***8.********************987765 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.057
   PF13460.1   1 IaviGAtGktGrrivkellarg.hevtal 28 
                 +aviGA G +G  i++ l+  + h +t+l
  MMETSP1325-20131115|2064_1 532 VAVIGA-GGIGFDIAEFLTHDDsHAATSL 559
                 79***9.***********99998888776 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 2.7
   PF13460.1  56 ealagvdvvvdafgarpe 73 
                 e + +vd+vv+++g+++ 
  MMETSP1325-20131115|2064_1 654 EQVLDVDHVVVCAGQEET 671
                 334467777777776554 PP

>> PF01593.19  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00017      0.11       2      28 ..     417     443 ..     416     446 .. 0.94
   2 ?   -3.4   0.1       5.2   3.4e+03     226     261 ..     623     666 ..     615     669 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00017
                 ---HHHHHHHH---EEEEEESSS---- CS
  PF01593.19   2 aGLaAArqLlqaGfdVtvlEArdrvGG 28 
                 aGLaA  + +++G+dVt++EA++ +GG
  MMETSP1325-20131115|2064_1 417 AGLAASCTAAERGHDVTLFEASGEIGG 443
                 8999999999****************9 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 5.2
                 EETTEEEEEEEEETSCEEEEEECSS........EEEESEEEE-S CS
  PF01593.19 226 vrlnkrVksitkegdgvtvttedgr........tykaDaVvvTl 261
                 v+ +  V++++ ++ g  + +  ++        ++ +D+Vvv++
  MMETSP1325-20131115|2064_1 623 VKMVSGVEYVKVDDEGLHIKVHPKKkgepaveqVLDVDHVVVCA 666
                 555555555555554444444444466678888999***99886 PP

>> PF01262.16  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   0.00015       0.1      20      51 ..     406     437 ..     396     451 .. 0.88
   2 ?   -3.1   0.1         7   4.5e+03      21      38 ..     530     547 ..     522     553 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00015
                 --EEEEE-------HHHHHHHH---EEEE--S CS
  PF01262.16  20 pakvvviGaGvvGlgAievakglgaevvaldk 51 
                  +kv v+G+G +Gl+A  +a + g++v+ ++ 
  MMETSP1325-20131115|2064_1 406 KIKVAVVGGGCAGLAASCTAAERGHDVTLFEA 437
                 589************************98876 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 7
                 -EEEEE-------HHHHH CS
  PF01262.16  21 akvvviGaGvvGlgAiev 38 
                   v viGaG  G   +e+
  MMETSP1325-20131115|2064_1 530 KSVAVIGAGGIGFDIAEF 547
                 67999***9999887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (800 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 1.28u 0.36s 00:00:01.64 Elapsed: 00:00:00.90
# Mc/sec: 2130.10
//
Query:       MMETSP1325-20131115|2070_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0048   16.0   0.8     0.0048   16.0   0.5    2.5  2  PF14257.1 Domain of unknown function (DUF4349)


Domain annotation for each model (and alignments):
>> PF14257.1  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   1.6     0.015     2e+02      15      40 ..     101     126 ..      79     151 .. 0.50
   2 !   16.0   0.5   3.5e-07    0.0048     147     189 ..     181     224 ..     167     226 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.015
   PF14257.1  15 saaapaaaaeaaadeaesaeapadaa 40 
                 +a+  +a+++++a++a s  ++a+++
  MMETSP1325-20131115|2070_1 101 AASLQQAQQAQQAQQAHSKGQAAQQQ 126
                 22222333333333332222222222 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 3.5e-07
   PF14257.1 147 seerllall.ekaetvedllevereLsrvqaeiEsleaqlryLd 189
                 +e++ +a++ ++a++++d l+v +++ ++q++++  + ql+ ++
  MMETSP1325-20131115|2070_1 181 HEKKCTAVQlRNANKLQDALAVMKDIKKRQEQLDIFKNQLNFMK 224
                 466667765489*****************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1625  (0.118856); expected 273.4 (0.02)
Passed bias filter:                      516  (0.0377414); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.54
# Mc/sec: 1016.23
//
Query:       MMETSP1325-20131115|2068_1  [L=770]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   8.4e-134  446.3   0.0   1.1e-133  445.9   0.0    1.1  1  PF01274.17 Malate synthase


Domain annotation for each model (and alignments):
>> PF01274.17  Malate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  445.9   0.0  8.1e-138  1.1e-133       2     502 ..      39     722 ..      38     740 .. 0.93

  Alignments for each domain:
  == domain 1    score: 445.9 bits;  conditional E-value: 8.1e-138
                 HHHHCCT-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-...........HHHHH--------S-----...........................................................................................................................................-EEEEEE----------TT-EEEEEE-S-SEEEESSSSS---...........HH---------B--S------B------EEEE---.......----EEEEE----TTS-SSSB.-----S-------...---CHHHHHHT....S------EEEE-------HHHHHHHHHHHHHHHH----SBSEEB-----SCCCCCTHHHHHCTTTSS-B------TTT---CCHHHT-----B...SCHHCCS-THHHHHHHHHHH-......-------.------------SSSCCCHHHH---TTT----S-EESSHHHHHHHHHHHHHS-HHHHHHHHCCS-...HHHH......HHHHCS..---B..........HHHHHHHHHHH------HHHHC.-----..EE-TT...E--SCCCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHCCC-.......---S----..... CS
  PF01274.17   2 dvvaeealeeteilteealafvaelvrdltpkrkellarRdelqaeidkghlp...........dflpetkylreepewktat...........................................................................................................................................lhielqdrrveitGktdrkmvinvlnesaittiaDfEdsvap...........twenlvkGqlnledakrgkisfrkenkdksYklnd.......kkrsllfvrprGwhltekhil.vdgeeisegilDf...glyffhnakel....klsrgggpYivlPKmespeEaalwndvFsraedvlglprgtikatvliEtlraafeldeiiyelrdrvaglNtGrlDyifseiktlreagamvLPdRkavtktkpfikaYekllvktchkrgvgamgGla.akipikkdaeaneellekvredKlrevraGadgaWvahPtlatlaaevfhkvdvrpnQaelakee...vrit......addllt.kipea..........eeteeeldnnvqvglgYvvaWl.rGvGc..Vpiin...LMEDaATaeiSrqqlaqWirhgvvlkegvkvslelmakvvdeqnarleelgeedekyreaakllk 502
                 ++v++e  ++t+  +++++  +  l  +++p+++ell++R+++q+ id +hl+            fl+e++yl + p   ++                                                                                                                                            l +e+ ++r +++G    ++v +v +esa +tiaD Edsva+           +w+ l+kG+l+ +   ++ +  r + +d  Y+  +       ++rsl++vr++G h   ++++ + geei+e +lD+   +l+ +h+++ +    ++sr g+++iv+PKm++peE+a+   +F r+ed lglpr+t+k+++++E++r++ +l +++ ++rdrv ++NtG+lD++++ei+t++eaga+v    ka+ k++++++aYe+++v++      g+   la ++ +i+k+++a ++ ++++++ K+++++aGa +aWv++Pt+atl+a ++h + v  +Q+++ +++   +  +      +  llt  i+ a           e++ el+nn+q++lgYv++W+ +GvGc  Vp+i     MED AT++iS+q+la+W++hgv + e+v + le+ma vvd+qna       +d++y+++++ ++
  MMETSP1325-20131115|2068_1  39   722
                 6888888899999999***********************************6669********9999*******887655533459******************************************************************************************************************************************************************************************************99877666655..55556*****999999******************999999989************99999999999998999**********************************************************************************************...7899*****************......5555554399********************************************************99876653222..13344447899997677779********999********************************99888********************************************.......9999999944333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.12u 0.38s 00:00:01.50 Elapsed: 00:00:00.80
# Mc/sec: 2306.49
//
Query:       MMETSP1325-20131115|2061_1  [L=991]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (991 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.34u 0.39s 00:00:01.73 Elapsed: 00:00:00.78
# Mc/sec: 3044.60
//
Query:       MMETSP1325-20131115|2072_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 576.05
//
Query:       MMETSP1325-20131115|2071_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 978.94
//
Query:       MMETSP1325-20131115|2073_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0061   15.9  17.6      0.023   14.1   1.2    2.0  2  PF08598.6  Sds3-like
  ------ inclusion threshold ------
      0.024   14.2   3.6      0.094   12.3   0.9    2.0  2  PF09769.4  Apolipoprotein O
       0.11   11.8   8.0       0.14   11.4   5.5    1.3  1  PF06937.6  EURL protein
       0.14   10.8   0.0       0.14   10.8   0.0    1.2  1  PF09609.5  CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
        0.2    9.0   5.1       0.22    8.8   3.5    1.0  1  PF05478.6  Prominin
       0.34   10.2   9.5        0.3   10.4   6.1    1.3  1  PF11931.3  Domain of unknown function (DUF3449)
       0.95    9.2   8.5        5.5    6.7   0.4    3.0  3  PF11629.3  C terminal SARAH domain of Mst1
        5.9    5.5  10.4        6.3    5.4   7.2    1.0  1  PF04514.7  Bluetongue virus non-structural protein NS2


Domain annotation for each model (and alignments):
>> PF08598.6  Sds3-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   1.2   1.3e-05     0.023      49      97 ..       5      53 ..       1      58 [. 0.89
   2 !    8.4   5.7   0.00072       1.2      72     135 ..      57     120 ..      54     133 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.3e-05
   PF08598.6 49 ndleeerdleltrlrldeeyklerieseyaeeiekakqeyeklvkllke 97
                ++l   +d +l  l+++ e +l   e+e+ +e+e++++++  +v++l +
  MMETSP1325-20131115|2073_1  5 DRLIDLQDTRLLALEQEFEKELHTLENEFGAEKEAIQKQHALEVQELND 53
                566667899*************************************988 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00072
   PF08598.6  72 rieseyaeeiekakqeyeklvkllkerlinkleekikrLeeeresldiaessalllhprkfsla 135
                  +++e + +   akqe+e+  +++k++ ++++++ + +L    e l++  ++a l++ ++  + 
  MMETSP1325-20131115|2073_1  57 AVNTEEQDREAEAKQEHEQGREEIKNKNLEEINMLRIQLDSQIEDLEQKFENAHLNYLQTTDQR 120
                 567788888899******************************************9998876664 PP

>> PF09769.4  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.4    0.0063        11      37      88 ..      23      74 ..       9      82 .. 0.84
   2 ?   12.3   0.9   5.5e-05     0.094      22      92 ..      63     133 ..      54     134 .] 0.79

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0063
   PF09769.4 37 vrptdrLeaqirsaRlfleeklsavedavntvksrvldtersvtstvaslkp 88
                +++  +Le+++    ++++++     +++n+++s+v+++e+  + + ++ ++
  MMETSP1325-20131115|2073_1 23 EKELHTLENEFGAEKEAIQKQHALEVQELNDIMSAVNTEEQDREAEAKQEHE 74
                566778999999999******99999**************988887777665 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 5.5e-05
   PF09769.4  22 peeeakllgensl.ysvrptdrLeaqirsaRlfleeklsavedavntvksrvldtersvtstvaslkpppee 92 
                 ++ ea++ +e +  +++ + ++Le +i+ +R +l ++++ +e++++++   +l+t  + ts +++  ++++e
  MMETSP1325-20131115|2073_1  63 QDREAEAKQEHEQgREEIKNKNLE-EINMLRIQLDSQIEDLEQKFENAHLNYLQTTDQRTSDFKFYTKKDQE 133
                 333344334455568888999998.5***********************************99998888765 PP

>> PF06937.6  EURL protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   5.5   8.4e-05      0.14     195     239 ..      59     103 ..      18     126 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8.4e-05
   PF06937.6 195 kaesgseasiqrrekhysreelnkktleelkqlkekllkqiqevf 239
                 ++e + + +  ++e+++ ree+++k+lee++ l+ +l  qi+++ 
  MMETSP1325-20131115|2073_1  59 NTEEQDREAEAKQEHEQGREEIKNKNLEEINMLRIQLDSQIEDLE 103
                 33333344556788899************************9863 PP

>> PF09609.5  CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   8.3e-05      0.14     181     229 ..      84     132 ..      39     134 .] 0.85

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 8.3e-05
   PF09609.5 181 ssegvvnlrvpveGsLaeLeakfenklpllavgsilpaapkavYdkkse 229
                   e++  lr+  + ++++Le+kfen +  + +++  +++    Y kk++
  MMETSP1325-20131115|2073_1  84 NLEEINMLRIQLDSQIEDLEQKFENAHLNYLQTTDQRTSDFKFYTKKDQ 132
                 4589999*************************************99875 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   3.5   0.00013      0.22     321     410 ..      27     120 ..       8     128 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00013
   PF05478.6 321 eilenleevveadlskvvqeglstleeipskvkeqtssvvqevkkaldslgteiksv....aeelpkqvkstlsqllenvqksikpasdeveqy 410
                 + len     ++ ++k+ + ++++l++i s v+++ +++  e+k++ ++ ++eik+      ++l+ q++s++++l ++ ++   ++ ++++q 
  MMETSP1325-20131115|2073_1  27 HTLENEFGAEKEAIQKQHALEVQELNDIMSAVNTEEQDREAEAKQEHEQGREEIKNKnleeINMLRIQLDSQIEDLEQKFENAHLNYLQTTDQR 120
                 44666666778889999999**********************************9862222578999999999999999999999888888774 PP

>> PF11931.3  Domain of unknown function (DUF3449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   6.1   0.00018       0.3       3      81 ..      18      95 ..      16     103 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00018
   PF11931.3  3 aeykieklaellskelektienverkqalteeerekeeelekeassksesseeeseeeseeeseeeeekkiynplnlpL 81
                 e+++ek  ++l++e+ + +e +++++al ++e+++  ++ +++++++e +++ +e+e+ +e+ ++++ +  n l++ L
  MMETSP1325-20131115|2073_1 18 LEQEFEKELHTLENEFGAEKEAIQKQHALEVQELNDIMSAVNTEEQDREAEAK-QEHEQGREEIKNKNLEEINMLRIQL 95
                5889999****************************933333333333332222.2223333333444445555555555 PP

>> PF11629.3  C terminal SARAH domain of Mst1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.4    0.0032       5.5      15      33 ..      13      31 ..       7      40 .. 0.86
   2 ?   -0.4   0.0      0.55   9.4e+02       7      21 ..      45      59 ..      39      68 .. 0.75
   3 ?    6.1   0.3    0.0051       8.7       3      25 ..      78     100 ..      76     114 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0032
   PF11629.3 15 qrlasLDpemErEieelrk 33
                 rl +L +e E+E+  l++
  MMETSP1325-20131115|2073_1 13 TRLLALEQEFEKELHTLEN 31
                69************99876 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.55
   PF11629.3  7 slsveeLeqrlasLD 21
                 l v+eL+  ++++ 
  MMETSP1325-20131115|2073_1 45 ALEVQELNDIMSAVN 59
                577888888888765 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.0051
   PF11629.3   3 efLkslsveeLeqrlasLDpemE 25 
                 e +k+ ++ee+++  + LD+++E
  MMETSP1325-20131115|2073_1  78 EEIKNKNLEEINMLRIQLDSQIE 100
                 77899**************9976 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   7.2    0.0037       6.3     161     258 ..      18     118 ..       4     133 .. 0.58

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0037
   PF04514.7 161 ireeRekekeklerklaikeerlmespdsdede.....akldeeakemtpetskqekeeerreavekrleerveklkldleekredlkkeqeeeekvetesdd 258
                 + +e eke + le++   ++e + ++   +++e       +++e  e   e + ++++e+ re+++++  e+ ++l+++l+ ++edl+++ e+ +    +  d
  MMETSP1325-20131115|2073_1  18 LEQEFEKELHTLENEFGAEKEAIQKQHALEVQElndimSAVNTE--EQDREAEAKQEHEQGREEIKNKNLEEINMLRIQLDSQIEDLEQKFENAHLNYLQTTD 118
                 45555666666665555555533333332222210000233333..33334444556666777788888888899************9998887655544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1811  (0.132461); expected 273.4 (0.02)
Passed bias filter:                      576  (0.0421299); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.55
# Mc/sec: 583.84
//
Query:       MMETSP1325-20131115|2076_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 529.96
//
Query:       MMETSP1325-20131115|2077_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-10   39.2   0.0    4.6e-10   39.1   0.0    1.0  1  PF00026.18 Eukaryotic aspartyl protease


Domain annotation for each model (and alignments):
>> PF00026.18  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.0   3.4e-14   4.6e-10     274     312 ..       8      47 ..       4      49 .. 0.94

  Alignments for each domain:
  == domain 1    score: 39.1 bits;  conditional E-value: 3.4e-14
                 ESEEETT-.ST--SSEEE--TTGGGEEEEEETTTTEEEEE CS
                 xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00026.18 274 lglqeldv.peegelwiLGdvFlrsaytvfdldnnrvglA 312
                 l++q +d+  ++g+lwiLGdvF+r++y+ fd++ +++g+A
  MMETSP1325-20131115|2077_1   8 LAVQGIDIpAPNGPLWILGDVFMRKYYVKFDVAGQQIGIA 47 
                 7899999999*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.73
# Mc/sec: 164.13
//
Query:       MMETSP1325-20131115|2075_1  [L=431]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.34s 00:00:01.05 Elapsed: 00:00:00.59
# Mc/sec: 1750.56
//
Query:       MMETSP1325-20131115|2078_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-52  178.2   0.2    1.6e-52  178.1   0.1    1.0  1  PF00232.13 Glycosyl hydrolase family 1


Domain annotation for each model (and alignments):
>> PF00232.13  Glycosyl hydrolase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.1   0.1   1.1e-56   1.6e-52     275     454 ..       2     189 ..       1     190 [] 0.91

  Alignments for each domain:
  == domain 1    score: 178.1 bits;  conditional E-value: 1.1e-56
                 TT--HHHHHHH----S-E-EEE--EEEEEE-T..TSSTT-EEEEGGGCCB.....-----B----SBB-.HHHHHHHHHHHHHTTT---EEEEEB----B--CSS...HHC--HHHHHHHHHHHHHHHHHH.H----B----BB-SB----TT----S----EEEETTTTSEEEE-HHHHHHHHHHHHTE CS
  PF00232.13 275 peiteedkellkgsvdflglnyYtselvknkeeeeaslseseeakaeeev.....dpslpktdsaweie.peglrkllellkekYenlpiyiteNGlglkdevee...gkveDdkRidYlkehlnevkkai.edgvdlrgYfawsllDnfewakgyskrfGlvyvdfdetqeRtpkeSakwykeviekng 454
                 p++te++ e l g  df+gln+Yts++++++ e+   +s +++ ++++ +     +     +ds+w +  p+g+rk l+++k++Y+n+pi++teNG+++ +e +    ++++D+ R+d++++++ ++  ai edgvd++gYfaws++Dnfew+ gy+ rfG++yvd ++t+eR++k+S +wyk+vi++ng
  MMETSP1325-20131115|2078_1   2 PTFTEDEREALLGAWDFFGLNHYTSKYIASSGES-GGTSWADDCGTTSYTkdldgNAIGADSDSSWLKVvPWGFRKSLNWVKDRYDNPPILVTENGVSVPGESDAaleDALADTFRVDFYSQYIGNMSLAIdEDGVDVQGYFAWSFMDNFEWTDGYNVRFGMHYVD-YDTEERYAKDSSRWYKDVIANNG 189
                 89****************************9955.455555555554444478889999*******9999***************************998887766779*********************************************************.9*******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 968.74
//
Query:       MMETSP1325-20131115|2079_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-17   61.9   0.3    4.8e-16   58.1   0.2    2.6  1  PF02882.14 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
    4.9e-06   26.4   0.0    9.3e-06   25.5   0.0    1.5  1  PF00763.18 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain


Domain annotation for each model (and alignments):
>> PF02882.14  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.1   0.2     7e-20   4.8e-16      10     159 ..      90     251 ..      81     253 .. 0.78

  Alignments for each domain:
  == domain 1    score: 58.1 bits;  conditional E-value: 7e-20
                 TT--SS--HHHHHHHHHHHH--...........--S-EEEEE---TT---HHHHHHHCTT-EEEEE-TT-.............ST---HHHHSSEEEE---.----B-GGG-----EEEE---EEC..TTEEE--B-HHHHHTTSSEE----------HHHHHHHHHHHHHHH CS
  PF02882.14  10 kgeeallpctpkgivellketgie.........legkkvvvvGrsnivgkplallLleknatVtvchskt.............kdlaeilreaDivvvavG.kpelvkaemvkegavviDvGinrvkekgklvGDvdfeevkevasaitPvpgGVGpmTvamllkntleaakr 159
                 k ++++lpctp ++v+ll+++g           l+gk ++vv+rs++vg+pla+lL++++atV  ++  +             k+ ++ + e+D++v +v  k+  ++ +++++++++++v   +          vd +e+k++   +  vp  VG+mTvaml +n+l+ +++
  MMETSP1325-20131115|2079_1  90 KTQKCVLPCTPLSVVKLLESQGEYdmskpngnrLAGKIITVVNRSEVVGRPLAALLANDGATVYSVDIDSiyvmqrgrmvrteKSQEDACFESDVIVLGVPsKAYKLNPKWISPNTMIVNVASFKN---------VDEDELKKI-DNVKYVP-LVGKMTVAMLERNLLRLYEN 251
                 5589**************98653223344455599****************************9998776555555555555566778999*********824567***************87666.........665555554.3345555.49***********9998875 PP

>> PF00763.18  Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   1.4e-09   9.3e-06      61     117 .]      10      69 ..       1      69 [. 0.81

  Alignments for each domain:
  == domain 1    score: 25.5 bits;  conditional E-value: 1.4e-09
  PF00763.18  61 seliklpediteeellaeieklnedssvhGilvqlPl.......pkhldeekileaidpeKDvD 117
                 +el    +++++e+l a+++++n+d+s+hGi++ +P+         +  ++ + ++i+p KDv+
  MMETSP1325-20131115|2079_1  10 YEL----REVQKENLEAALHAANDDPSIHGIIIYYPVfgaepsfYGGCMDDYLRDSISPTKDVE 69 
                 444....45699*************************887644445678999**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.61
# Mc/sec: 1217.82
//
Query:       MMETSP1325-20131115|2074_1  [L=1362]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-17   60.8  87.4    1.4e-05   24.4   3.6   10.2 10  PF07699.8 GCC2 and GCC3
    0.00046   18.8  18.2    0.00046   18.8  12.6    4.4  5  PF03302.8 Giardia variant-specific surface protein
  ------ inclusion threshold ------
       0.03   12.6   0.1      0.056   11.7   0.1    1.3  1  PF09531.5 Nucleoporin protein Ndc1-Nup
       0.16   10.5   0.1       0.24    9.9   0.1    1.1  1  PF06074.7 Protein of unknown function (DUF935)
       0.21   11.2  78.8       0.18   11.4   1.3   10.1  9  PF07562.9 Nine Cysteines Domain of family 3 GPCR


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   3.9     0.027        74      13      38 ..     299     328 ..     287     346 .. 0.49
   2 !    7.2   2.4    0.0012       3.4       3      36 ..     326     358 ..     324     366 .. 0.79
   3 !   11.7   1.2   4.7e-05      0.13       1      42 [.     340     378 ..     340     380 .. 0.88
   4 !   10.9   2.2   8.7e-05      0.24       1      32 [.     371     403 ..     371     405 .. 0.91
   5 !   22.4   1.4   2.2e-08     6e-05       9      36 ..     407     434 ..     403     440 .. 0.88
   6 !   13.0   1.4   1.8e-05     0.049       5      36 ..     436     468 ..     432     473 .. 0.78
   7 !   14.9   3.3   4.7e-06     0.013       8      36 ..     474     501 ..     466     510 .. 0.74
   8 !   24.4   3.6   5.1e-09   1.4e-05       1      48 []     527     580 ..     527     580 .. 0.89
   9 ?    2.9   2.8     0.026        70       6      32 ..     572     595 ..     568     609 .. 0.78
  10 !    9.0   0.5   0.00033      0.89      10      34 ..     660     683 ..     654     687 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.027
   PF07699.8  13 pCprGtYkneegqk....kCiaCppgttTs 38 
                 +C  Gt++++++       C++C +g++ +
  MMETSP1325-20131115|2074_1 299 ECVAGTFQDTGEPLlegeVCQKCSAGRSSD 328
                 566666654444433333455555554322 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0012
   PF07699.8   3 ylkkgnkkCepCprGtYkneegqkkCiaCppgtt 36 
                  ++   ++C  Cp G   +eeg+ +C  Cp+g  
  MMETSP1325-20131115|2074_1 326 SSDDMASECYDCPAGK-TSEEGNATCWDCPAGGM 358
                 56666789*******9.78889999*****9965 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 4.7e-05
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgs 42 
                 G+ +++gn +C  Cp G    ++g+ +C aC +g+ Ts+ g+
  MMETSP1325-20131115|2074_1 340 GKTSEEGNATCWDCPAGG--MSVGNSSCFACDAGK-TSSLGA 378
                 889999***********7..78************6.777776 PP

  == domain 4    score: 10.9 bits;  conditional E-value: 8.7e-05
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqk.kCiaCp 32 
                 G+ ++ g ++C++C  Gt+ + +g+  +C +C 
  MMETSP1325-20131115|2074_1 371 GKTSSLGASECTECAAGTFGEATGSMySCGNCK 403
                 778888999************999999*****6 PP

  == domain 5    score: 22.4 bits;  conditional E-value: 2.2e-08
   PF07699.8   9 kkCepCprGtYkneegqkkCiaCppgtt 36 
                 + C +C+ G Y+++ gq++Ci C pg++
  MMETSP1325-20131115|2074_1 407 YACVACSVGKYQQYIGQTDCIDCSPGSV 434
                 67***********************965 PP

  == domain 6    score: 13.0 bits;  conditional E-value: 1.8e-05
   PF07699.8   5 kkgnkkCepCprGtYkneegqk.kCiaCppgtt 36 
                  ++   C  C+ G + +++g + +C +C +g++
  MMETSP1325-20131115|2074_1 436 ANSYTGCADCGSGHFVQSDGTNeTCSPCSAGKY 468
                 445578*********77777666******9986 PP

  == domain 7    score: 14.9 bits;  conditional E-value: 4.7e-06
   PF07699.8   8 nkkCepCprGtYkneegqkkCiaCppgtt 36 
                 + +C+pC++GtY+ e g  +C++C pg +
  MMETSP1325-20131115|2074_1 474 DGNCTPCGEGTYSAE-GAASCNSCRPGEY 501
                 578*********865.6667****99854 PP

  == domain 8    score: 24.4 bits;  conditional E-value: 5.1e-09
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppg......ttTskkgsksesdC 48 
                 Gt +++ + +C++C +G+++++ g+++C++C ++      +tT ++g +s + C
  MMETSP1325-20131115|2074_1 527 GTISDAASWRCTACLEGYFQPQNGSDECLKCTSEvghssaHTTVGEGQSSCDIC 580
                 899999999***********************9999999888998888776655 PP

  == domain 9    score: 2.9 bits;  conditional E-value: 0.026
   PF07699.8   6 kgnkkCepCprGtYkneegqkkCiaCp 32 
                 +g++ C  C +++Y++ ++ ++C    
  MMETSP1325-20131115|2074_1 572 EGQSSCDICIEDYYRKDDECVSC---E 595
                 67889*********976655555...4 PP

  == domain 10    score: 9.0 bits;  conditional E-value: 0.00033
   PF07699.8  10 kCepCprGtYkneegqkkCiaCppg 34 
                  C++C+r+++ +++++k C++C   
  MMETSP1325-20131115|2074_1 660 LCSLCKRDFFLDTSRKK-CKPCAGR 683
                 6*********9998776.****865 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1  13.1     0.081   2.2e+02     270     340 ..     316     386 ..     290     389 .. 0.55
   2 ?   -0.2  16.9     0.097   2.6e+02     237     323 ..     345     429 ..     342     429 .. 0.85
   3 !    5.5  16.7    0.0018       4.9     258     341 ..     411     499 ..     410     507 .. 0.84
   4 !   18.8  12.6   1.7e-07   0.00046     243     335 ..     508     605 ..     499     611 .. 0.79
   5 ?   -1.9   0.5      0.32   8.7e+02      29      55 ..     650     678 ..     620     692 .. 0.51

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.081
   PF03302.8 270 tvcttcldGyvks..sdacakcdsscetctGaattcktcatGyyksatkevactssesd.kgvtGvkdclscap 340
                  vc++c  G   +  ++ c  c ++  + +G+at c  c +G      + ++c ++++   +  G ++c +ca 
  MMETSP1325-20131115|2074_1 316 EVCQKCSAGRSSDdmASECYDCPAGKTSEEGNAT-CWDCPAGGMSV--GNSSCFACDAGkTSSLGASECTECAA 386
                 4566666666655556666666666444445543.44444443322..22333333333123566666666664 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.097
   PF03302.8 237 asggtc.qkeadgykldsgdlvvcsegckectsstvcttcldGyvkssdacakcdsscetctGaattcktcatGyyksatkevactss 323
                 ++++tc + +a g  + +++   c  g  +   +++ct+c+ G   ++        sc  c+Ga  +c +c+ G y+   +++ c ++
  MMETSP1325-20131115|2074_1 345 EGNATCwDCPAGGMSVGNSSCFACDAGKTSSLGASECTECAAGTFGEAT---GSMYSCGNCKGALYACVACSVGKYQQYIGQTDCIDC 429
                 556677345789999************999999*********9887654...4567999******************99999999876 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.0018
   PF03302.8 258 vcsegc.kectsstvcttcldGyvks..sdacakcdsscetct.GaattcktcatGyyksatkevactssesd.kgvtGvkdclscapp 341
                  cs g  ++   +t+c  c  G v +     ca c s+    + G+ +tc  c++G y s +  ++ct + +   +  G + c sc p 
  MMETSP1325-20131115|2074_1 411 ACSVGKyQQYIGQTDCIDCSPGSVSAnsYTGCADCGSGHFVQSdGTNETCSPCSAGKYASVAVDGNCTPCGEGtYSAEGAASCNSCRPG 499
                 5777742566789**********98854568*****99876555*************************97665999*********996 PP

  == domain 4    score: 18.8 bits;  conditional E-value: 1.7e-07
   PF03302.8 243 qkeadgykldsgdlvvcsegckectsstvcttcldGyvks...sdacakcds.....scetctGaat.tcktcatGyyksatkevactssesdkgvtGvkdc 335
                 + +  g ++++++  +c+ g  + ++s  ct+cl+Gy +    sd c kc s     s +t  G+ + +c++c   yy+   ++v+c++ + +    G+++c
  MMETSP1325-20131115|2074_1 508 DVDGTGIRFEATTCRTCAAGTISDAASWRCTACLEGYFQPqngSDECLKCTSevghsSAHTTVGEGQsSCDICIEDYYRKDDECVSCETNDLE----GLEKC 605
                 456678999****************************9766789******7522222667777776537******************987655....66666 PP

  == domain 5    score: -1.9 bits;  conditional E-value: 0.32
   PF03302.8  29 kacseekk.evceecnsstyltp.tkqci 55 
                 + c++ ++   c  c+ ++ l+   k+c 
  MMETSP1325-20131115|2074_1 650 ELCVNGSHgALCSLCKRDFFLDTsRKKCK 678
                 33444333344444444444444122222 PP

>> PF09531.5  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   2.1e-05     0.056      17      75 ..     693     751 ..     680     766 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.1e-05
   PF09531.5  17 lllyllllvflllskfs..iqwsslslsllpsgstgirllllflalllililrkeqlhvey 75 
                 +++++++l+f++ ++ +  ++w++  + +lp   +g +++l+++ + +i+il+ +  +v+ 
  MMETSP1325-20131115|2074_1 693 VIAIICCLAFVFALRSRpvTKWFQRHQKWLPT--FGEKFILFVVTMQIIFILKENHNSVGG 751
                 6788898899986666699************9..9*******************9999964 PP

>> PF06074.7  Protein of unknown function (DUF935)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   8.7e-05      0.24     350     459 ..    1075    1182 ..    1067    1201 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 8.7e-05
   PF06074.7  350 lvelNfgdaarlPrfefdteepeDlkalaealkkLvdiGvriteeyvqeklglpepeedeavleaaakaeaaaeaaakaeaeaaaaseaaeaeqdaldaaldelaaelee 459 
                    ++N  ++ rl r ++ t++ eD++++  a + Lv++G   +e+++ ++l     +++ ++ +++++++ ++ a +  +a  a+a+e a+a +++l a+++++ + ++e
  MMETSP1325-20131115|2074_1 1075 REQMNKDTKLRLLRSQLLTDKREDKEKFGVAWQHLVETGGPGDEKQLLDTLAGLASKTALPNGKQPTPKHSSKLA-DV-DALLAEADELAPAFHATLRALTERVGGRYQE 1182
                  5589999999******************************************99999999888888888865433.33.3778888888889999999999988665554 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   3.4     0.035        95       5      53 ..     296     342 ..     293     343 .. 0.67
   2 ?    4.4   0.7    0.0097        27      27      53 ..     349     373 ..     345     374 .. 0.88
   3 ?    6.9   0.8    0.0017       4.6      27      49 ..     380     403 ..     378     408 .. 0.91
   4 ?   11.1   0.6   8.1e-05      0.22      26      53 ..     407     434 ..     406     435 .. 0.93
   5 ?    7.4   0.8    0.0012       3.3      28      53 ..     442     468 ..     441     469 .. 0.89
   6 ?   11.4   1.3   6.6e-05      0.18      27      53 ..     476     501 ..     476     502 .. 0.89
   7 ?   10.0   3.9   0.00018      0.49       9      51 ..     524     560 ..     517     563 .. 0.81
   8 ?   -1.1   1.8      0.53   1.5e+03      28      51 ..     577     597 ..     572     600 .. 0.78
   9 ?    1.4   0.6     0.087   2.4e+02      28      49 ..     661     681 ..     660     685 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.035
   PF07562.9   5 CsepCkpGqrk....kvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeqw 53 
                 C ++C +G+ +       +g+      C +C++g  s+   + +C +Cp +++
  MMETSP1325-20131115|2074_1 296 CPTECVAGTFQdtgePLLEGEV-----CQKCSAGRSSDD-MASECYDCPAGKT 342
                 6666666666633322234444.....*********994.467******9876 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0097
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C +Cp+g +s   ++ +C +C+ +++
  MMETSP1325-20131115|2074_1 349 TCWDCPAGGMSV--GNSSCFACDAGKT 373
                 6999********..8899****98875 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0017
   PF07562.9  27 dCvpCpegeisnet.dettCkkCp 49 
                 +C++C++g++ + t  +++C +C+
  MMETSP1325-20131115|2074_1 380 ECTECAAGTFGEATgSMYSCGNCK 403
                 7*************8899*****7 PP

  == domain 4    score: 11.1 bits;  conditional E-value: 8.1e-05
   PF07562.9  26 fdCvpCpegeisnetdettCkkCpeeqw 53 
                 + Cv C+ g++++  ++t+C +C+ +++
  MMETSP1325-20131115|2074_1 407 YACVACSVGKYQQYIGQTDCIDCSPGSV 434
                 78***********99********99876 PP

  == domain 5    score: 7.4 bits;  conditional E-value: 0.0012
   PF07562.9  28 CvpCpegeisnet.dettCkkCpeeqw 53 
                 C +C  g++++++  + tC +C+ +++
  MMETSP1325-20131115|2074_1 442 CADCGSGHFVQSDgTNETCSPCSAGKY 468
                 ***********997788*****98865 PP

  == domain 6    score: 11.4 bits;  conditional E-value: 6.6e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C+pC eg++s  +++ +C++C  +++
  MMETSP1325-20131115|2074_1 476 NCTPCGEGTYSA-EGAASCNSCRPGEY 501
                 5***********.7799*****99875 PP

  == domain 7    score: 10.0 bits;  conditional E-value: 0.00018
   PF07562.9   9 CkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpee 51 
                 C +G++       +   + C+ C eg ++ ++++++C kC++e
  MMETSP1325-20131115|2074_1 524 CAAGTISDA---AS---WRCTACLEGYFQPQNGSDECLKCTSE 560
                 666655533...44...***********************975 PP

  == domain 8    score: -1.1 bits;  conditional E-value: 0.53
   PF07562.9  28 CvpCpegeisnetdettCkkCpee 51 
                 C  C e  + +    ++C++C+++
  MMETSP1325-20131115|2074_1 577 CDICIEDYYRK---DDECVSCETN 597
                 88899988888...3379999876 PP

  == domain 9    score: 1.4 bits;  conditional E-value: 0.087
   PF07562.9  28 CvpCpegeisnetdettCkkCp 49 
                 C  C++  +++ t   +Ck+C 
  MMETSP1325-20131115|2074_1 661 CSLCKRDFFLD-TSRKKCKPCA 681
                 999******99.5588*****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1362 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       700  (0.0511995); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 2.13u 0.37s 00:00:02.50 Elapsed: 00:00:01.53
# Mc/sec: 2133.23
//
Query:       MMETSP1325-20131115|2083_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.1   8.3     0.0042   16.4   5.8    2.0  1  PF02151.14 UvrB/uvrC motif
     0.0045   16.9   4.8     0.0045   16.9   3.4    2.4  1  PF05103.8  DivIVA protein
  ------ inclusion threshold ------
      0.017   15.3   4.9      0.017   15.3   3.4    2.4  2  PF06156.8  Protein of unknown function (DUF972)
       0.02   15.0   6.5       0.02   15.0   4.5    2.6  2  PF06005.7  Protein of unknown function (DUF904)
      0.024   14.2   0.7      0.024   14.2   0.5    2.8  2  PF02183.13 Homeobox associated leucine zipper
        0.1   13.0   6.2       0.22   11.9   4.3    1.6  1  PF08609.5  Nucleotide exchange factor Fes1
       0.22   11.0  16.0       0.34   10.4  11.1    1.3  1  PF03962.10 Mnd1 family
       0.25   10.8  10.8       0.32   10.4   7.5    1.3  1  PF04156.9  IncA protein
       0.88    9.8  15.7        1.8    8.9   8.4    2.4  2  PF12711.2  Kinesin motor
       0.91    7.9   5.9        1.2    7.5   4.1    1.1  1  PF00851.13 Helper component proteinase
        3.1    7.3  26.8        0.9    9.0  11.7    2.1  2  PF04889.7  Cwf15/Cwc15 cell cycle control protein
        3.3    8.1   5.7        6.2    7.2   3.7    1.7  1  PF03955.9  Adenovirus hexon-associated protein (IX)
        4.2    7.1  15.2       0.12   12.0   1.6    3.1  4  PF07716.10 Basic region leucine zipper
        4.4    7.2  15.9       0.09   12.6   2.6    3.0  2  PF00170.16 bZIP transcription factor
        6.5    5.2   7.9        7.3    5.1   5.1    1.4  1  PF07407.6  Seadornavirus VP6 protein
        8.7    6.2  18.3         18    5.1  12.7    1.5  1  PF08432.5  Fungal protein of unknown function (DUF1742)


Domain annotation for each model (and alignments):
>> PF02151.14  UvrB/uvrC motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   5.8   4.9e-06    0.0042       1      35 [.      11      45 ..      11      46 .. 0.96

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 4.9e-06
  PF02151.14  1 kkllkeLeeemeeAaeeedFEkAAklRDqinalek 35
                ++++++L++e+++ ae+ed++ A  ++ +i++l++
  MMETSP1325-20131115|2083_1 11 DERIAKLTAEKKQKAEDEDYDGAKAIKAEIEKLKA 45
                689******************************97 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   3.4   5.3e-06    0.0045      32      82 ..      71     121 ..      67     131 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 5.3e-06
   PF05103.8  32 kdyeallkeneelkeeieeleekleeykeleeslkkslvvaqetaeevkan 82 
                 k++++l++en +lkee+++ +++ + +ke+ e+l + +v a+e+a+ v + 
  MMETSP1325-20131115|2083_1  71 KEITTLKEENITLKEENTAFKKENTTLKEKVEALTNYIVKAEEAADXVGSD 121
                 8999*****************************************998665 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   3.9       1.2   9.9e+02      34      69 ..      29      63 ..       6      69 .. 0.59
   2 ?   15.3   3.4     2e-05     0.017      18      64 ..      67     113 ..      60     131 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 1.2
   PF06156.8 34 lleenaelkleneklrerleeleeeekkkekkkkkk 69
                 ++  +++k e+ekl+ + +e e++e+ +e++++++
  MMETSP1325-20131115|2083_1 29 DYDGAKAIKAEIEKLKAEKAEAEKAEE-EETDEEST 63
                345567888999999988777766333.33333333 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 2e-05
   PF06156.8  18 eelleeleelkkelkelleenaelkleneklrerleeleeeekkkek 64 
                 e++l+e+++lk+e  +l een++ k en++l+e++e l++   k+e+
  MMETSP1325-20131115|2083_1  67 EATLKEITTLKEENITLKEENTAFKKENTTLKEKVEALTNYIVKAEE 113
                 57899*******************************99983333332 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   6.6         1   8.6e+02      22      52 ..      35      66 ..       7      71 .. 0.68
   2 ?   15.0   4.5   2.3e-05      0.02      16      52 ..      69     105 ..      64     117 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 1
                HHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHH CS
   PF06005.7 22 lLqmeieeLkeeneqlk.eeneeLeeenkklk 52
                + + eie+Lk e+++++  e+ee  ee + l+
  MMETSP1325-20131115|2083_1 35 AIKAEIEKLKAEKAEAEkAEEEETDEESTTLQ 66
                45677777777766665445555666655555 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF06005.7  16 AvdtialLqmeieeLkeeneqlkeeneeLeeenkklk 52 
                 ++ +i++L++e+  Lkeen++ k+en +L+e+ + l 
  MMETSP1325-20131115|2083_1  69 TLKEITTLKEENITLKEENTAFKKENTTLKEKVEALT 105
                 5778999999999999999999999999999888776 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.6     0.033        28      23      37 ..      35      49 ..      32      57 .. 0.65
   2 ?   14.2   0.5   2.8e-05     0.024      16      40 ..      82     106 ..      71     110 .. 0.63

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.033
  PF02183.13 23 sLqkEkekLraevls 37
                + ++E ekL+ae+++
  MMETSP1325-20131115|2083_1 35 AIKAEIEKLKAEKAE 49
                455666666666655 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 2.8e-05
  PF02183.13  16 aLkaendsLqkEkekLraevlsLke 40 
                 +Lk+en + +kE+  L+  v++L++
  MMETSP1325-20131115|2083_1  82 TLKEENTAFKKENTTLKEKVEALTN 106
                 5666666666666666666666665 PP

>> PF08609.5  Nucleotide exchange factor Fes1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   4.3   0.00025      0.22      19      79 ..      47     107 ..      18     114 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00025
   PF08609.5  19 eakdstesadapkstnedldpevLealfggpsdaelmkeamevitdeeatledkliafdnf 79 
                 +a+ +++++++  +++++l+   L+++   +++  ++ke  ++ ++e++tl +k++a+ n+
  MMETSP1325-20131115|2083_1  47 KAEAEKAEEEETDEESTTLQEATLKEITTLKEENITLKEENTAFKKENTTLKEKVEALTNY 107
                 222222222222234478****************************************997 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4  11.1    0.0004      0.34      61     152 ..      23     116 ..       7     123 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0004
  PF03962.10  61 seakkklkteleklkkeleelkqrikelqaeiekekkkreeteereelleelkeleeelkklkkeleklakld...pekveklkeetevakesan 152
                 ++a  + ++ ++++k+e+e+lk++++e++++ e+e +  e t+ +e++l+e+++l+ee+  lk+e ++++k +   +ekve l++ +++a e+a+
  MMETSP1325-20131115|2083_1  23 QKAEDEDYDGAKAIKAEIEKLKAEKAEAEKAEEEE-TDEESTTLQEATLKEITTLKEENITLKEENTAFKKENttlKEKVEALTNYIVKAEEAAD 116
                 56666777788999999999999999988765555.55555569999******************997766551124566666666666666665 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   7.5   0.00038      0.32      76     149 ..      25     111 ..       6     152 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00038
   PF04156.9  76 e........srlqeelsesesqlsele....eeleqleerlae.leseledleedlellqeelksleerlesleesikelakeirel 149
                 +         ++++e+ +++++ +e+e    ee +++++ l+e + +e++ l+e++  l+ee++++++++ +l+e++++l+  i + 
  MMETSP1325-20131115|2083_1  25 AededydgaKAIKAEIEKLKAEKAEAEkaeeEETDEESTTLQEaTLKEITTLKEENITLKEENTAFKKENTTLKEKVEALTNYIVKA 111
                 1223446687777788888888888877778899998888776267999****************************9998766555 PP

>> PF12711.2  Kinesin motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.7      0.15   1.3e+02       3      38 ..      12      45 ..      10      52 .. 0.67
   2 ?    8.9   8.4    0.0021       1.8       5      74 ..      40     115 ..      38     118 .. 0.70

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.15
   PF12711.2  3 dkIkrLeklldgslsaeslleeeneeLkeEiklLre 38
                ++I++L + ++  + ae+ + +  +++k+Ei+ L++
  MMETSP1325-20131115|2083_1 12 ERIAKLTAEKK--QKAEDEDYDGAKAIKAEIEKLKA 45
                55666655444..4555555556679******9985 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0021
   PF12711.2   5 IkrLeklldgslsaeslleeen.....eeLkeEiklLre.qveknpevtrfalEnlrlreelrrlqnfeeegerev 74 
                 I++L++ ++++  ae+ + +e      e+  +Ei +L+e ++    e t f+ En+ l+e+++ l n+ ++ e+ +
  MMETSP1325-20131115|2083_1  40 IEKLKAEKAEAEKAEEEETDEEsttlqEATLKEITTLKEeNITLKEENTAFKKENTTLKEKVEALTNYIVKAEEAA 115
                 444444444444444333333344555677789999996368999999*********************9888765 PP

>> PF00851.13  Helper component proteinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   4.1    0.0014       1.2      63     182 ..       8     129 ..       2     138 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0014
                 XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF00851.13  63 eelleslkkeleealeel.kkekeefkhvkkvlellk.eelevenanleafkeiakligdkkeapfkhiqeinkvllkgneateeeleeasksllelarylknrtenikkgslksfrNkisa 182
                 e + e++ k + e+++++ +++++ +k++k  +e lk e+ e+e+a+ e+++e  +++++ + + ++ ++e n +l + n+a ++e ++ ++++  l+ y+ + +e+ +     s +N+i++
  MMETSP1325-20131115|2083_1   8 ESYDERIAKLTAEKKQKAeDEDYDGAKAIKAEIEKLKaEKAEAEKAEEEETDEESTTLQEATLKEITTLKEENITLKEENTAFKKENTTLKEKVEALTNYIVKAEEAADXVGSDSVQNPIPQ 129
                 4444455544444444440445666777777666666155667778888888889999999999999999999999999***************************9999999999999876 PP

>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  11.7    0.0011       0.9     133     182 ..      18      67 ..       2      75 .. 0.71
   2 ?    3.4   2.2     0.054        46      59     127 ..      76     154 ..      64     169 .. 0.51

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0011
   PF04889.7 133 desdddsdddddeDetaeLlrELekiKkeraeekereeeekaaeeekere 182
                   +++++ +d+d D  +++ +E+ek+K e+ae +++eeee ++e    +e
  MMETSP1325-20131115|2083_1  18 TAEKKQKAEDEDYDGAKAIKAEIEKLKAEKAEAEKAEEEETDEESTTLQE 67 
                 22333333468999**************************7777665555 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.054
   PF04889.7  59 lraeLle..aEaaakakkekskkkralenakkeeeleaakeaeededeekea..........krkkkleeareidaddsdk 127
                 l++e ++  +E+ a++k++ ++ k++ e   ++  ++a++ a+   +++ ++          k ++++++ r+ dadd+ +
  MMETSP1325-20131115|2083_1  76 LKEENITlkEENTAFKKEN-TTLKEKVEA-LTNYIVKAEEAADXVGSDSVQNpipqielgsiKLTWIESDSRKRDADDEVE 154
                 4444332002333333332.222222222.222222333223332223333366677888888888899999999999654 PP

>> PF03955.9  Adenovirus hexon-associated protein (IX)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   3.7    0.0072       6.2      39     105 ..      41     107 ..      22     111 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0072
   PF03955.9  39 stltyatvssstldtaaaaaastsaaaatarslaeeveslselkskvsaleekltvllaeLeelkqq 105
                 ++l+ ++   ++++ +   ++st+ ++at++++++  e    lk++ +a ++++t l++++e+l++ 
  MMETSP1325-20131115|2083_1  41 EKLKAEKAEAEKAEEEETDEESTTLQEATLKEITTLKEENITLKEENTAFKKENTTLKEKVEALTNY 107
                 556666666445555555555566677788888888888888999999***************9975 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   2.6       0.6   5.1e+02      21      52 ..      20      51 ..       8      56 .. 0.84
   2 ?    1.9   1.4       0.2   1.7e+02      30      53 ..      69      85 ..      48      86 .. 0.52
   3 ?    7.7   0.5    0.0032       2.8      30      54 .]      69      93 ..      66      93 .. 0.86
   4 ?   12.0   1.6   0.00014      0.12      24      53 ..      77     106 ..      76     107 .. 0.94

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.6
  PF07716.10 21 ekkkakeeeleervkeLeeeNaqLrqkveqLe 52
                ekk++ e+e  + +k+ ++e+++L+++ ++ e
  MMETSP1325-20131115|2083_1 20 EKKQKAEDEDYDGAKAIKAEIEKLKAEKAEAE 51
                78999999999999999999999988766555 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.2
  PF07716.10 30 leervkeLeeeNaqLrqkveqLek 53
                + +++  L+eeN +L       + 
  MMETSP1325-20131115|2083_1 69 TLKEITTLKEENITL-------KE 85
                334445555555555.......44 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0032
  PF07716.10 30 leervkeLeeeNaqLrqkveqLeke 54
                + +++  L+eeN +L++++ + +ke
  MMETSP1325-20131115|2083_1 69 TLKEITTLKEENITLKEENTAFKKE 93
                5689999***********9999987 PP

  == domain 4    score: 12.0 bits;  conditional E-value: 0.00014
  PF07716.10  24 kakeeeleervkeLeeeNaqLrqkveqLek 53 
                 k++++ l+e+  + ++eN +L++kve+L++
  MMETSP1325-20131115|2083_1  77 KEENITLKEENTAFKKENTTLKEKVEALTN 106
                 889999*********************986 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   3.5       3.2   2.8e+03      32      61 ..      11      45 ..       6      71 .. 0.60
   2 ?   12.6   2.6   0.00011      0.09      26      60 ..      71     105 ..      66     109 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 3.2
                HHHHHHHHHHH............HHHHHHHHHHHH CS
  PF00170.16 32 eekvkeLeaeNkaLkke.....leelkkevaklks 61
                 e++++L+ae k+ ++      ++ +k e++klk+
  MMETSP1325-20131115|2083_1 11 DERIAKLTAEKKQKAEDedydgAKAIKAEIEKLKA 45
                55566666555533221111114444445555544 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHHHHHHH.......HHHHHHHHHHH CS
  PF00170.16  26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                 +ei  L+e+  +L++eN+a kke+ +lk++v++l+
  MMETSP1325-20131115|2083_1  71 KEITTLKEENITLKEENTAFKKENTTLKEKVEALT 105
                 56777888888888888888888888888888876 PP

>> PF07407.6  Seadornavirus VP6 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.1    0.0085       7.3      18      60 ..      56      99 ..      37     123 .. 0.69

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0085
   PF07407.6 18 eetae.nhelegvsfdelvalreenaklkkeneilktklhrles 60
                eet e    l+  ++ e+++l+een  lk+en ++k +   l+ 
  MMETSP1325-20131115|2083_1 56 EETDEeSTTLQEATLKEITTLKEENITLKEENTAFKKENTTLKE 99
                45543145678888888888888888888888888766555543 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  12.7     0.022        18      65     168 ..       8     114 ..       2     129 .. 0.49

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.022
   PF08432.5  65 kelkeeiekv....kkeyeekqkakkekkkkk.kekdkekekkkdkkddksekekekeeeekaeelkkseeeaastldelkprkyaLhkefyqsRidrkrkaevakker 168
                 +  +e+i+k+    k++ e+++   +++ k + ++ ++ek + ++ +++++++e+++ +e+  +e+++ +e ++ tl+e ++ +++ +++ ++++++ +++  v+++e+
  MMETSP1325-20131115|2083_1   8 ESYDERIAKLtaekKQKAEDEDYDGAKAIKAEiEKLKAEKAEAEKAEEEETDEESTTLQEATLKEITTLKE-ENITLKE-ENTAFKKENTTLKEKVEALTNYIVKAEEA 114
                 45555555553321222222222222222222222222222222222344444444455555555555444.4566666.88888888888888888888887766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1933  (0.141384); expected 273.4 (0.02)
Passed bias filter:                      631  (0.0461527); expected 273.4 (0.02)
Passed Vit filter:                       108  (0.00789936); expected 13.7 (0.001)
Passed Fwd filter:                        28  (0.00204798); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.86u 0.38s 00:00:01.24 Elapsed: 00:00:00.56
# Mc/sec: 971.38
//
Query:       MMETSP1325-20131115|2080_1  [L=722]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (722 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.02u 0.35s 00:00:01.37 Elapsed: 00:00:00.63
# Mc/sec: 2746.30
//
Query:       MMETSP1325-20131115|2082_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.53    9.6  11.8       0.72    9.1   8.2    1.1  1  PF04484.7 Family of unknown function (DUF566)


Domain annotation for each model (and alignments):
>> PF04484.7  Family of unknown function (DUF566)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   8.2   5.3e-05      0.72      11     127 ..      82     202 ..      76     211 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 5.3e-05
   PF04484.7  11 sgvaesprkssrrrlssk......rflsetassrlealnapasprssssarklssssseklskkkesslargllssrsvspsrasasaaasangslatssdsassspsrsrrvtssesssnap 127
                 sg  +s++++sr+ +++k        + e +  +++a +++ +p +  ++r++  ss+ +  +  ++s ++ +lss+++s+ + s+ +  ++ +s+++  +s +++p+  rr++ss sss+ap
  MMETSP1325-20131115|2082_1  82 SGGGSSGSNVSRQPRKQKslddawDDWGEDTGGSGAADEEEEEPLPVAPPRQTRVSSQFEDDEPVSNSMSQMSLSSNGASAPSPSSGM--ALHKSASAPVSSIPPAPAPVRRSSSSSSSSKAP 202
                 4555555555555555555565587788888999999999999999999999999999666666666666666666666555555554..445555555555555555555555544666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 929.11
//
Query:       MMETSP1325-20131115|2084_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-58  197.3   0.0    2.1e-58  197.1   0.0    1.0  1  PF00121.13 Triosephosphate isomerase


Domain annotation for each model (and alignments):
>> PF00121.13  Triosephosphate isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.1   0.0   1.5e-62   2.1e-58      77     243 ..       1     168 [.       1     169 [. 0.98

  Alignments for each domain:
  == domain 1    score: 197.1 bits;  conditional E-value: 1.5e-62
                 HHHHHHTT--EEEESEHHHHHHS.-BHHHHHHHHHHHHHTT.-EEEEEESCEHHHHHTTHHHHHHHHHHHHHHHTSSTGGGGGEEEEEEEGGG------HHHHHHHHHHHHHHHHHHHHTHHHHHCCSEEE------TTTHHHHHTSTT----EE-HGTTSCHHHHHH CS
  PF00121.13  77 aemlkdlgvkyviiGHSErrqyfgetdeevakkvkaalkag.ltpvlCvgEtleereagktkevlkeqlkailekldeealknliiAYePvwAIGtgkvatpeeaqevhaairkelaekfskevaeevrilyGGsvnaenakellkqkdvdGlLvGgaslkaesflai 243
                 a+m++ +g++yv+ GHSErr +f+ +d  +++kvk++l++g +  +lC+gE+lee+eag   ++++ ql++ l+++++e++++++iAYePvwAIGtg ++ p+ aq+vha ir+++ + +++++a e+ri+yGGsv+++ +kel++q+d+dG LvGgasl+ae+f  i
  MMETSP1325-20131115|2084_1   1 ASMIESMGCSYVLAGHSERRVLFKDDDTAINRKVKKILESGnMGCILCIGESLEEYEAGLVGQICNIQLAKDLAGVTAEEMERVVIAYEPVWAIGTGLTCPPDVAQKVHANIRDWFVKAYGEKTAAETRIQYGGSVTPDTVKELMSQPDIDGCLVGGASLDAEKFGPI 168
                 68************************************985599*************************************************************************************************************************776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.45s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 792.64
//
Query:       MMETSP1325-20131115|2081_1  [L=349]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.44s 00:00:00.99 Elapsed: 00:00:00.59
# Mc/sec: 1417.51
//
Query:       MMETSP1325-20131115|2085_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 516.46
//
Query:       MMETSP1325-20131115|2086_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-39  133.9   2.7    8.1e-39  133.1   1.9    1.3  1  PF04427.13 Brix domain
     0.0046   16.5   0.4     0.0075   15.8   0.3    1.3  1  PF05843.9  Suppressor of forked protein (Suf)


Domain annotation for each model (and alignments):
>> PF04427.13  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.1   1.9   1.2e-42   8.1e-39       1     190 [.     119     311 ..     119     312 .. 0.89

  Alignments for each domain:
  == domain 1    score: 133.1 bits;  conditional E-value: 1.2e-42
  PF04427.13   1 vitsrkpskrlrqllkdlrslmppnakklkrgkknklkdllelagekgvthllvvgeskk.rp...sslrigrlpngptlefrvenykllkdikkakkrpkgskpllvfngftteldpegkllkellqdlFpppnvekislksidrvilfsnqrdtvisfRhyi.....fks.....gskvvkkll..ravkLeeiGPrftlrlik 190
                 ++t+ kpsk l  ++ dl++l+ p + ++ r++   +k+++++a +k++thl+v+ge+kk ++   + ++++rlp+gpt+ f+v+n+  + d+k++ k +++++p++++n+f+t+l   g+++++ l +l+p++     ++++++ v++f+nqrd+ i++R ++     + +     ++k +kk     + +L+e+GPrftl+l++
  MMETSP1325-20131115|2086_1 119 ITTRPKPSKHLFRFIADLMTLL-PKSFYYERKSF-DVKQICQFATNKKFTHLIVLGEDKKyKKkmcNGMIVSRLPDGPTAFFKVSNVQISTDLKSRGK-SISQQPEIILNNFNTRL---GRRVGRFLGSLYPHE-----PNFKGREVVTFHNQRDF-IFVRYHRyifdeT-EvqregEKKDPKKTElgVKARLQELGPRFTLKLRW 311
                 79999*****************.**********8.*********************999876544478*************************85555.45777************...***************.....99***************.*****97787641.2455576666776558899**************98 PP

>> PF05843.9  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.3   1.1e-06    0.0075     162     275 ..      48     161 ..       5     166 .. 0.50

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.1e-06
   PF05843.9 162 elksetkqerdkallqkkeeqaas......aesskkrkleeedsekkpdklqraegrqleqqkksesakseeaasqsqkqqqqqpap............................................lpreivallsvLPsaqyfdgpvfdpeklvellr 275
                 e  +++++ + ka+         +      + ++kk+k+ e+++e                                                                                      l r+i++l++ LP++ y++ + fd++++ ++ +
  MMETSP1325-20131115|2086_1  48 ERRTRREENKRKAT---------EagelgeEAPRKKQKTIESERE-----------------------------------------VdptfvspddlevfgdeagdefasifgneikpkimittrpkpskhLFRFIADLMTLLPKSFYYERKSFDVKQICQFAT 161
                 11111111111111.........0111111222222222222222.........................................122333333333333333344444444444444444444444888***************************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       690  (0.0504681); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.33s 00:00:01.01 Elapsed: 00:00:00.65
# Mc/sec: 1279.29
//
Query:       MMETSP1325-20131115|2087_1  [L=542]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-46  157.2   0.0    6.9e-46  156.6   0.0    1.3  1  PF00732.14 GMC oxidoreductase
    7.9e-38  129.8   0.2    1.4e-37  128.9   0.2    1.5  1  PF05199.8  GMC oxidoreductase


Domain annotation for each model (and alignments):
>> PF00732.14  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.6   0.0     1e-49   6.9e-46     122     298 .]       2     178 ..       1     178 [. 0.96

  Alignments for each domain:
  == domain 1    score: 156.6 bits;  conditional E-value: 1e-49
                 HHEEE----.GGG------EEE--------THHHHHHHHHHT----.--------..-----B----B-TT-BB--HHHHHTTTTTT-TTEEEE---------E------EE---EE------.-EE-EEEEEEEE-----SHHHHHHH-----HHHHTT-----SS---.--------EE CS
  PF00732.14 122 kvetaqale.sdlhgvdgrlgvtekgkeesplnkallkaaeelGlp.vprdlngk..hqcGvcllgvtcrtgarqstarawLrpalerpnleiltgakaekiileegrkkravGVeasdkkgtvkrlvvaakevvvaaGalnsPqlLqrSGlGkaehLkevgvdvvvdlpgvGkNLqdHpv 298
                 k+e++ +++  ++hg  g++ v ++ ++++pl+k +l a+ e+G + ++ d+n+   +q+G++ + v+ r+g+r+s+a+++L+pal r+nle+l+ga++ ki +e   ++ a GVe++ k++ v+    a  ev++a+Ga+nsPq L++SG+G+a+hLke+g++vv dl gvG+NLqdHp+
  MMETSP1325-20131115|2087_1   2 KAEDDYRGNsPEFHGQGGPIAV-SDVRYQNPLSKTFLTACAEAGASrFNSDFNDWsvNQEGYGRFSVMERKGERSSSAKEYLQPALGRKNLEVLQGAQVGKITFE---GTTASGVEVQWKNKAVSASLKAGGEVLLAGGAINSPQTLMLSGVGPADHLKEHGIEVVKDLSGVGENLQDHPA 178
                 66766666668***********.**********************99******9989*********************************************995...99*********************************************************************95 PP

>> PF05199.8  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.9   0.2   2.1e-41   1.4e-37       2     145 .]     287     424 ..     286     424 .. 0.97

  Alignments for each domain:
  == domain 1    score: 128.9 bits;  conditional E-value: 2.1e-41
   PF05199.8   2 esrGsvtlsssdpsgapsidvnylsdprDvaalvealkklrkileaaalsklllaeltpgpekeekdaaeasdealleavrraavttwHplGtcrMGkdekd.gVVDsdlrvygvknLrVvDaSvfPsapggnptltvyalAeka 145
                 +srGsv+l+ssdp  + +++ +yl d+rD+ +++e+lk  rki++++a+ ++  +e++pg+       +++sd++l++++r ++ t++ ++GtcrMG + ++ +VVD++l+v+g+++LrVvDaSv+P +pgg++  +++++Aeka
  MMETSP1325-20131115|2087_1 287 HSRGSVRLASSDPAVKAKVTTGYLRDERDLVTMREGLKLGRKIAASPAFDTYRGEEVYPGA-------HVKSDAELDAYIRGSIHTSNALVGTCRMGVASDKdAVVDEELKVHGLSGLRVVDASVMPRIPGGQTGSSTFMVAEKA 424
                 79**************************************************9*******9.......9***************************9777767****************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (542 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.36s 00:00:01.14 Elapsed: 00:00:00.63
# Mc/sec: 2061.63
//
Query:       MMETSP1325-20131115|2089_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-16   58.7   0.1    5.5e-16   58.4   0.0    1.0  1  PF00644.15 Poly(ADP-ribose) polymerase catalytic domain


Domain annotation for each model (and alignments):
>> PF00644.15  Poly(ADP-ribose) polymerase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0     4e-20   5.5e-16      24     137 ..      15     148 ..       3     166 .. 0.77

  Alignments for each domain:
  == domain 1    score: 58.4 bits;  conditional E-value: 4e-20
                 HTS-TTTTEEEEEEEEEEEE---CCCCGCCGG............SS-.....EEEEEE---GGG----.---------TTS-----------EEBSSHHHHHGGG--....-SSS----EEEEEEE---.EEE-SS- CS
  PF00644.15  24 ktrdsthaklkileifrvqregeaerfqekkk............lrn.....rrlLwHGsrltnvasi.lsqGLriappeapvtGymfGkGiYfAddaskSanYckt....seangeglllLaeValGd.ikeltka 137
                 +++++  a+ ++ +i+r++++++++++++k +              +     +++ +HG+    v ++  +qG+  ++++a+++   +G+G YfA+d+++S+ Y+       e++g   +l ++Va+G+ ++ +++a
  MMETSP1325-20131115|2089_1  15 ANNTNMLADTRVTRIQRIENMNLWQSYAAKLNsmkvrakketpeP-DsskyeQMYYFHGTAPHLVYELeYQQGF--NRSFAGKNACFYGRGCYFARDSAYSIDYSGLmpggVEKKGPYQMLACRVAVGEfCQGVKDA 148
                 4445555699*******************9888898887766650.155566***********99887579***..****************************986333233455555**********55555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 800.38
//
Query:       MMETSP1325-20131115|2088_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.1    6.2   3.4        2.5    5.9   2.4    1.1  1  PF07218.6 Rhoptry-associated protein 1 (RAP-1)


Domain annotation for each model (and alignments):
>> PF07218.6  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   2.4   0.00018       2.5     131     170 ..     195     234 ..     171     287 .. 0.69

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00018
   PF07218.6 131 tskpkststeslksssdskskasaksnvksaskyGessss 170
                 ++ pk+ st+   s+s s ++as  s + s+s+   ss  
  MMETSP1325-20131115|2088_1 195 PASPKAPSTSKFTSTSTSVARASESSTSTSTSPSASSSVR 234
                 5567777777777777777777777777777776666543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.38s 00:00:01.08 Elapsed: 00:00:00.59
# Mc/sec: 1332.21
//
Query:       MMETSP1325-20131115|2091_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.011   15.5   0.4      0.014   15.2   0.3    1.0  1  PF01221.13 Dynein light chain type 1
      0.065   13.3   0.3      0.073   13.1   0.2    1.1  1  PF12485.3  Lymphocyte signaling adaptor protein
       0.12   10.0   0.0       0.12   10.0   0.0    1.0  1  PF05059.7  Orbivirus VP4 core protein
       0.13   11.6   0.3       0.14   11.4   0.2    1.0  1  PF11508.3  Protein of unknown function (DUF3218)
       0.16   10.3   1.0       0.17   10.2   0.7    1.0  1  PF11853.3  Protein of unknown function (DUF3373)


Domain annotation for each model (and alignments):
>> PF01221.13  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.3   5.2e-06     0.014       9      73 ..      14      77 ..       8      78 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 5.2e-06
                EETTS-HHHHHHHHHHHHHHHHH-SSHHH.HHHHHHHHHHHHH-S-EEEE-------EEES--SEE CS
  PF01221.13  9 kaadmseemqeeaielaaealekfeeeke.iAkhiKkefDkkygptWhcivGksFGsyvthekktf 73
                 a dms    +e  + +++ l k e+ +   A++i k+++kk+ ++ ++i+ k+FG++   e+ +f
  MMETSP1325-20131115|2091_1 14 SAEDMSAVQADEQYQAISQKLAKAEDAEAaAATKI-KDLEKKMASA-NVIMKKRFGAQLESEAASF 77
                56899999999999999999999998766255555.5799999999.***********99998776 PP

>> PF12485.3  Lymphocyte signaling adaptor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   2.7e-05     0.073      18      71 ..      17      71 ..       2      78 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.7e-05
   PF12485.3 18 qsspvksekeleleeeepe.eseveesaeksgislGkKvkaisrTMrkkmgkkyv 71
                  s v+++++ ++ ++++   +++e+ a+++ + l kK+ +    M+k+ g +  
  MMETSP1325-20131115|2091_1 17 DMSAVQADEQYQAISQKLAkAEDAEAAAATKIKDLEKKMASANVIMKKRFGAQLE 71
                6678888888888887777566777778889999****************98765 PP

>> PF05059.7  Orbivirus VP4 core protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   4.2e-05      0.12      94     131 ..      42      79 ..      24      80 .] 0.89

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 4.2e-05
   PF05059.7  94 vlkekdskeletkiGkkrvklrkkfGdalrkyalkfai 131
                  +  ++ k+le k+  + v ++k+fG +l + a+ fa+
  MMETSP1325-20131115|2091_1  42 AAAATKIKDLEKKMASANVIMKKRFGAQLESEAASFAK 79 
                 5567889***********************99999875 PP

>> PF11508.3  Protein of unknown function (DUF3218)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   5.3e-05      0.14      59     112 ..      16      69 ..       9      76 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.3e-05
   PF11508.3  59 keystllaaeiaqvvllqlrmvqekekvcnvevlallssvasnldrikarfgan 112
                 ++ s++ a+e  q++  +l  +++ e + + ++  l   +as    +k rfga+
  MMETSP1325-20131115|2091_1  16 EDMSAVQADEQYQAISQKLAKAEDAEAAAATKIKDLEKKMASANVIMKKRFGAQ 69 
                 4678999***********************************999*******97 PP

>> PF11853.3  Protein of unknown function (DUF3373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.7   6.2e-05      0.17      19      77 ..      13      71 ..       2      78 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 6.2e-05
   PF11853.3 19 aaaaaaadidklqkiekLkkeleelkeqlkdlkkkvekiekksagdrlkisgdfrfrvd 77
                 +a+  + ++++ + ++++++l++ ++ ++++ +k++ +ekk a+ ++ ++  f  +++
  MMETSP1325-20131115|2091_1 13 LSAEDMSAVQADEQYQAISQKLAKAEDAEAAAATKIKDLEKKMASANVIMKKRFGAQLE 71
                3344444455566899*****************************99999888876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1494  (0.109274); expected 273.4 (0.02)
Passed bias filter:                      966  (0.0706554); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.45s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 355.02
//
Query:       MMETSP1325-20131115|2090_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-07   29.5   1.2    8.7e-07   28.6   0.8    1.4  1  PF11527.3 The ARF-like 2 binding protein BART
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.23   11.2   0.0    1.5  1  PF14465.1 NFRKB Winged Helix-like


Domain annotation for each model (and alignments):
>> PF11527.3  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.8   1.3e-10   8.7e-07      12     112 ..      90     204 ..      80     211 .. 0.87

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 1.3e-10
                 HHHHTS-HHHHHHHHHHHHHHHHTT--S........S-SSTTHHHHHHHHHHHHHHHHHHHHH-------THHHHH.........SS-GGG----HHHHHHGGG-HHHHHHHHHH CS
   PF11527.3  12 ileflaspvWkapiqdFieekcivFdde........eenkleyteihkeYkelvekllesfleelgispeqfeeac......lsesksknqaakkifqqllaaeDfeiFkkmMvq 112
                  ++f+ +++ ++ ++dF++e+ + F +          e  leyt++h +Y  + e  l++fl   g s  +f ++c        +   ++  +  +++ lla   +e F +mM++
  MMETSP1325-20131115|2090_1  90 AIKFFDGKDLNTVLDDFVQEHKHAFAEAaeaktdeeVEHRLEYTDLHVRYLRIFEGELDEFLRGQGCSSAEFFQQCqdaiedNYTALFEEHHHHWFVDALLASMSYEHFFAMMTT 204
                 57899999*****************9887777775567889***********************************888765445556677788899****************97 PP

>> PF14465.1  NFRKB Winged Helix-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.3e-05      0.23      33      68 ..      71     107 ..      55     118 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.3e-05
   PF14465.1  33 salndwlskapdWskllesalnflsg.dskdlpkefv 68 
                 ++ ++++   +dW++ +e+a++f+ g d +++ ++fv
  MMETSP1325-20131115|2090_1  71 ASDEEVAGGDRDWTDHIEPAIKFFDGkDLNTVLDDFV 107
                 55566677789**************966777888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       685  (0.0501024); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.53
# Mc/sec: 1008.28
//
Query:       MMETSP1325-20131115|2094_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.2   0.1       0.16   11.7   0.1    1.3  1  PF12601.3 Rubivirus non-structural protein


Domain annotation for each model (and alignments):
>> PF12601.3  Rubivirus non-structural protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   1.2e-05      0.16      11      27 ..      26      42 ..      16      46 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.2e-05
   PF12601.3 11 vsdrphlwlavplsrGG 27
                 s r  lwl+vp  rGG
  MMETSP1325-20131115|2094_1 26 TSHRQALWLSVPSQRGG 42
                58999***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.59
# Mc/sec: 280.25
//
Query:       MMETSP1325-20131115|2093_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-05   21.8   0.0    8.5e-05   21.5   0.0    1.1  1  PF00837.12 Iodothyronine deiodinase
  ------ inclusion threshold ------
      0.098   12.5   0.1       0.17   11.7   0.0    1.4  1  PF10898.3  Protein of unknown function (DUF2716)


Domain annotation for each model (and alignments):
>> PF00837.12  Iodothyronine deiodinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.2e-08   8.5e-05     138     211 ..     175     253 ..     130     269 .. 0.79

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 1.2e-08
  PF00837.12 138 llvyieeahpsdGWaitdds.....yeikkhqsledrlaaarllleraPgCrvvvdtmansssaaygalferlyviqeg 211
                 + +yi e+hp+d +  + +        ik h+sl+dr + a   +      ++ vd ++n+ +  y a   r +++ + 
  MMETSP1325-20131115|2093_1 175 VPIYIRESHPCDEFPAPASFqppewDVIKAHKSLDDRWKWAAKAKAMYRLPKMFVDSLDNKLALTYEAGAFRGFIVDRA 253
                 459**********9988774455645699********997777776666667999************999999999764 PP

>> PF10898.3  Protein of unknown function (DUF2716)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.5e-05      0.17     104     132 ..      73     103 ..      51     109 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.5e-05
   PF10898.3 104 WkvpvfPdG..dYyfflqkdlkwGllGhPwe 132
                 +k +  PdG  dY+ f+++++ wG+lGh  +
  MMETSP1325-20131115|2093_1  73 FKNTPGPDGtmDYHPFFKENVPWGMLGHVSK 103
                 445566898779****************765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1362.93
//
Query:       MMETSP1325-20131115|2092_1  [L=404]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       939  (0.0686805); expected 273.4 (0.02)
Passed bias filter:                      470  (0.0343768); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.79u 0.40s 00:00:01.19 Elapsed: 00:00:00.62
# Mc/sec: 1561.50
//
Query:       MMETSP1325-20131115|2098_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 372.77
//
Query:       MMETSP1325-20131115|2099_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.066   13.0   0.3      0.091   12.6   0.2    1.2  1  PF07043.8 Protein of unknown function (DUF1328)


Domain annotation for each model (and alignments):
>> PF07043.8  Protein of unknown function (DUF1328)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   6.7e-06     0.091       7      18 ..      41      52 ..      40      56 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.7e-06
   PF07043.8  7 AlvAgvlGFgGi 18
                A+vA++lGF+ +
  MMETSP1325-20131115|2099_1 41 AVVAALLGFTRV 52
                9********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|2097_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 1033.72
//
Query:       MMETSP1325-20131115|2095_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-27   96.6   0.0    1.7e-27   96.2   0.0    1.2  1  PF09414.5 RNA ligase


Domain annotation for each model (and alignments):
>> PF09414.5  RNA ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.0   1.3e-31   1.7e-27       2     184 .]      36     253 ..      35     253 .. 0.85

  Alignments for each domain:
  == domain 1    score: 96.2 bits;  conditional E-value: 1.3e-31
   PF09414.5   2 ewvateKlhGtnisvyiveeer..avrvakrsgeidpaedFfgyev..........lqnhyaasiealqallklallvsalipetvivyGElfG...pgvqknty...nlg....pekdfyvFdiavi........neqeel.rflsddaveefc.ktlgLktvpvLgrgtfdelkalsvenev..........lksslkknvaEGvVlkpvke.e.ngvrvilKak 184
                 +++ teK+hG+n+s++++ ++   +v++ krsg i++ edFf  +           ++n +a++ e+l++l++++ +v+      v ++GEl G   pg++  ++   + g     e +f +Fd+av+        ne+ +   +l+dd  +++c ++ g++ +pvL  g+f+e+ a++ ++++          +  + ++n+aEG+V+k++++ + +g r ilK k
  MMETSP1325-20131115|2095_1  36 RYICTEKVHGANFSFIVTGRSHdvTVHYGKRSGLIAESEDFFSFRTrrvperyescARNVHARVCERLDNLSQDD-IVQ------VTIFGELHGgayPGQPLVVDspvQIGvwytNEIEFMAFDVAVRvarphcggNENRGNhVYLDDDVARAVCsDKGGFTFAPVLFSGSFEECMAFPHVFDStlpalygqppI--KRGTNLAEGLVVKSCTNcDtTGKRLILKRK 253
                 6899************99998899**********************************************99988.564......*********9997777777744422134458**********9998888875333333689999998888835779*********************999******77543..4556***********99879*******965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.39s 00:00:01.08 Elapsed: 00:00:00.62
# Mc/sec: 1557.63
//
Query:       MMETSP1325-20131115|2100_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.017   14.5   0.1       0.03   13.7   0.1    1.3  1  PF13179.1 Family of unknown function (DUF4006)


Domain annotation for each model (and alignments):
>> PF13179.1  Family of unknown function (DUF4006)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.2e-06      0.03      24      48 ..     132     156 ..     126     170 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.2e-06
   PF13179.1  24 LsilavltvlaikvQqevatnpYkl 48 
                 +++l +l +++ik Q+++a   Y++
  MMETSP1325-20131115|2100_1 132 MAVLGTLAMCGIKHQKSQAMSLYET 156
                 789********************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       566  (0.0413985); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 863.59
//
Query:       MMETSP1325-20131115|2102_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-44  149.8   0.5    7.9e-44  149.4   0.3    1.1  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.4   0.3   5.7e-48   7.9e-44       1     153 [.      77     231 ..      77     233 .. 0.85

  Alignments for each domain:
  == domain 1    score: 149.4 bits;  conditional E-value: 5.7e-48
  PF00160.16   1 lvdietss..kGrivieLfedkaPktvenFlklakeg....fYdgtkfhrvikgfmiqgGdpsgkgangeek.kaggesipdEikkkklkh.krGalamartgpepnsngsqFfItlgdaphlDgkytvFGkVvegmdvvekieavetde.kpeknvkiksv 153
                 ++die+++  +Gri + L ++k+Pkt+enF+ l++ g     Y+g++fhrvi+gfm+qgGd+++ +   +++    ge+++dE+  + lkh  +G+l+ma+ g  p +ngsqFf+++++++hlDgk++vFG+V +g++vve+ieav++++  ++k+v+i + 
  MMETSP1325-20131115|2102_1  77 FFDIEIGGeaAGRILMSLRTEKTPKTAENFRALCT-GekgyGYEGSTFHRVIPGFMCQGGDFTNGNG--TGGkSIYGEKFEDEN--FDLKHtGPGVLSMANAG--PGTNGSQFFLCTTKTQHLDGKHVVFGRVAQGYEVVEAIEAVGSGSgTTSKTVVIAKS 231
                 57899987889***********************7.335578*******************887654..3333444447*****..56788688******998..7**************************************977666567777888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 1223.14
//
Query:       MMETSP1325-20131115|2103_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 198.94
//
Query:       MMETSP1325-20131115|2104_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.017   14.8   0.0      0.021   14.5   0.0    1.2  1  PF07940.8 Heparinase II/III-like protein
      0.076   12.4   0.3        0.1   11.9   0.2    1.2  1  PF05568.6 African swine fever virus J13L protein


Domain annotation for each model (and alignments):
>> PF07940.8  Heparinase II/III-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.1e-06     0.021      13      75 ..      34      95 ..      18     128 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.1e-06
   PF07940.8 13 tlildagpppgsghahaDklsfelysggkrllvdsGtgtyaase.pelrryfrstaaHntltvd 75
                ++ +  gpp  ++ a  ++ls  l ++ ++ ++++  ++   ++ pe +r++rst++H+t++++
  MMETSP1325-20131115|2104_1 34 SIGFSLGPP-VASSAATSALSADLVVQSHA-QTECAEASSLPTSaPEAARAWRSTECHSTVSFK 95
                566788999.99999999999999998884.66777665444446***************9876 PP

>> PF05568.6  African swine fever virus J13L protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   1.5e-05       0.1      82     143 ..      22      86 ..      17     116 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.5e-05
   PF05568.6  82 vtpqpgiakpagastasagkpvtdrpvtnrlvadkpvtnkpvt...drlvmaaggpeaasatasa 143
                   pqpg     g+   s g pv    +t  l ad  v  +  t   +  ++ +  peaa a  s+
  MMETSP1325-20131115|2104_1  22 SRPQPGQIAGGGSIGFSLGPPVASSAATSALSADLVVQSHAQTecaEASSLPTSAPEAARAWRST 86 
                 67********************************8887766551115567777888888776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 741.51
//
Query:       MMETSP1325-20131115|2101_1  [L=857]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-61  207.1   1.1    2.1e-61  207.1   0.8    1.6  2  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase
    2.2e-15   55.1   0.0    4.7e-05   22.8   0.0    4.7  4  PF07719.12 Tetratricopeptide repeat
    2.4e-15   55.7   0.7    1.4e-07   30.9   0.0    4.3  3  PF13414.1  TPR repeat
    7.8e-14   50.4   0.0    9.1e-06   24.9   0.0    4.7  4  PF00515.23 Tetratricopeptide repeat
    5.5e-13   48.5   0.0    7.9e-08   32.0   0.0    3.0  3  PF13424.1  Tetratricopeptide repeat
    5.7e-13   48.2   0.0      0.002   18.3   0.0    4.9  4  PF13174.1  Tetratricopeptide repeat
    2.8e-10   40.4   0.4      0.021   15.3   0.0    4.9  3  PF13432.1  Tetratricopeptide repeat
    1.6e-09   37.4   1.3     0.0041   17.5   0.0    5.1  4  PF13428.1  Tetratricopeptide repeat
    9.5e-08   31.1   0.0      0.073   12.7   0.0    4.7  4  PF13181.1  Tetratricopeptide repeat
    3.6e-06   26.1   0.0    4.2e-05   22.6   0.0    2.3  2  PF08631.5  Meiosis protein SPO22/ZIP4 like
    7.2e-05   22.5   0.5        3.5    7.9   0.0    4.6  4  PF13431.1  Tetratricopeptide repeat
    0.00018   20.9   0.1       0.93    9.3   0.0    3.5  3  PF13176.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.012   14.2   0.0        1.8    7.1   0.0    2.3  2  PF08324.6  PUL domain
        0.3   10.9   6.1        8.9    6.2   0.0    4.4  5  PF13374.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.7   1.6e+03     144     208 ..     432     531 ..     413     534 .. 0.49
   2 !  207.1   0.8   2.1e-64   2.1e-61      13     250 ..     544     816 ..     532     818 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.7
  PF01504.13 144 lleqlkkDtefLeslnimDYSLLlgihekeeeeeeeekk...........................eeeekekgiesed........ekevlylgiIDiL 208
                 + eql + t+  ++   + YSLL    ++ +e +  +++                           + ++k+++++  d         + v+ + i+D+L
  MMETSP1325-20131115|2101_1 432 MKEQLDNATSPITTGLAISYSLLQIYMDQLQEFTLADQEdiattppsdvsfterkmrtseyvlqdkHGNSKKDKFTFVDvapagfdhLRAVCGMTIVDYL 531
                 5556666666666666677888766632222222111113344445555555555555554444332222222222222444555555566666666666 PP

  == domain 2    score: 207.1 bits;  conditional E-value: 2.1e-64
  PF01504.13  13 ssggksgslfylskddrFliKtlkkselkvllkilpkYfehvkenpn.tllskiyglyrvkkqgsekkiyfvvmenlf......yserkihekyDLKGstvgRevkekekekkaavlkDldlleekellnlekekkkllleqlkkDtefLeslnimDYSLLlgih...ekeeeeeeeekk..........................eeeekekgiesed.....ekevlylgiIDiLqeYtlkKkleslvksllklkg....kdisvvsPkeYakRFlkfiek 250
                   +gksg++f++s d++ ++Kt+++ e +++ +il +Y++h+ +n + tll+++y ly++k  +    +++v m+n+f        + +++e yDLKGs + R v+ek+k++  +vlkDl+++++k+++++ ++   +l ++++kD++ Le++++mDYS+Llgi    e    ee  + +                                +g ++       e+e +y+giIDiLqeY++kKk+e+++ks l+  +    kdis+v+ ++Y +RF++f++k
  MMETSP1325-20131115|2101_1 544 VGEGKSGQFFFFSADRTIMLKTVTHAEWQFMNRILMDYHHHMVDNIEtTLLCRFYALYKLKLNK--GVTRLVAMNNIFqcsphlEAPASMKEMYDLKGSFHHRLVTEKQKASGVKVLKDLNWKNNKRKMRVAPQMHGALTDSMRKDVDWLEEHHVMDYSMLLGISaypE---AEEAVRMSsatstvstgsylsgvdpgrtsiwkhdM-----GGLKAIGedealEDENYYFGIIDILQEYNMKKKVEHAYKSRLMELKgknpKDISAVNAHDYGERFVNFMQK 816
                 579****************************************9987699**********6555..59**********7554432337899**************8766666689*************************************************74331...33333333455778888999988888887533222.....333332246677***************************97443334788*******************98 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   4.8e-08   4.7e-05       2      33 ..      24      55 ..      23      56 .. 0.95
   2 !   14.5   0.0   2.2e-05     0.021       3      34 .]      66      97 ..      64      97 .. 0.95
   3 !    6.3   0.0    0.0093       9.1       2      28 ..     106     132 ..     105     136 .. 0.88
   4 ?    5.7   0.0     0.015        15       4      34 .]     152     182 ..     149     182 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 4.8e-08
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldPn 33
                ++lyn+G ++  +g++ eA++++e+++ ldP+
  MMETSP1325-20131115|2101_1 24 KVLYNMGASLTGAGQLREAKDCYEQVVDLDPD 55
                689****************************8 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 2.2e-05
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldPnn 34
                 lyn+G  ++++gd ee  ++fe+++e dP++
  MMETSP1325-20131115|2101_1 66 TLYNIGVELLNNGDCEESCDWFEQVIERDPDH 97
                69****************************97 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.0093
                 HHHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAl 28 
                  a yn+G  ++++g+  eA+e f+  l
  MMETSP1325-20131115|2101_1 106 IAQYNQGVELLNQGQAHEAVERFQMIL 132
                 589*****************9998666 PP

  == domain 4    score: 5.7 bits;  conditional E-value: 0.015
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                  yn +  +++ g + eAl+ f++ +e+ P++
  MMETSP1325-20131115|2101_1 152 KYNFAVTALNDGSPFEALDIFQEIIEIKPDH 182
                 577788899999999**************97 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   1.4e-10   1.4e-07       5      69 .]      25      95 ..      19      95 .. 0.95
   2 !   24.8   0.1   1.1e-08   1.1e-05       5      68 ..      66     135 ..      60     136 .. 0.86
   3 !    8.4   0.0    0.0015       1.5       7      38 ..     153     184 ..     147     198 .. 0.88

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 1.4e-10
   PF13414.1  5 alkelGnalfkegdydeAieayekAleldpnnae.......lyynlAlaylklgkdyeeAledyekAleldP 69
                +l+++G  l  +g++ eA ++ye+ ++ldp++ e        +yn++  +l++g d ee  + +e+++e+dP
  MMETSP1325-20131115|2101_1 25 VLYNMGASLTGAGQLREAKDCYEQVVDLDPDSEEanqalvtTLYNIGVELLNNG-DCEESCDWFEQVIERDP 95
                799****************************9888899****************.57*************99 PP

  == domain 2    score: 24.8 bits;  conditional E-value: 1.1e-08
   PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnae.......lyynlAlaylklgkdyeeAledyekAleld 68 
                 +l++ G +l+++gd +e+++ +e+ +e dp++ +       + yn +  +l++g+  +eA+e +++ le +
  MMETSP1325-20131115|2101_1  66 TLYNIGVELLNNGDCEESCDWFEQVIERDPDHKDayeglviAQYNQGVELLNQGQ-AHEAVERFQMILENS 135
                 5899****************************99667777777777888888885.799***999999865 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0015
   PF13414.1   7 kelGnalfkegdydeAieayekAleldpnnae 38 
                 ++ +  +++ g + eA++ +++ +e+ p++ae
  MMETSP1325-20131115|2101_1 153 YNFAVTALNDGSPFEALDIFQEIIEIKPDHAE 184
                 67788999999999****************98 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   9.3e-09   9.1e-06       2      33 ..      24      55 ..      24      56 .. 0.96
   2 !   11.4   0.0   0.00017      0.17       3      34 .]      66      97 ..      64      97 .. 0.95
   3 ?    5.1   0.0     0.016        16       3      26 ..     107     130 ..     105     135 .. 0.84
   4 ?    2.9   0.0     0.083        81      19      34 .]     167     182 ..     167     182 .. 0.94

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 9.3e-09
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALelnPn 33
                k+lyn+G+ +   g++ eA ++ye+++ l+P+
  MMETSP1325-20131115|2101_1 24 KVLYNMGASLTGAGQLREAKDCYEQVVDLDPD 55
                689****************************8 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.00017
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  3 alynlGnaylklgkydeAleyyekALelnPnn 34
                +lyn+G+ +l++g+ +e  + +e+++e +P++
  MMETSP1325-20131115|2101_1 66 TLYNIGVELLNNGDCEESCDWFEQVIERDPDH 97
                79****************************97 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHTT-HHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyek 26 
                 a yn G+ +l++g+  eA+e ++ 
  MMETSP1325-20131115|2101_1 107 AQYNQGVELLNQGQAHEAVERFQM 130
                 88***************9986665 PP

  == domain 4    score: 2.9 bits;  conditional E-value: 0.083
                 HHHHHHHHHHHHHTTH CS
  PF00515.23  19 eAleyyekALelnPnn 34 
                 eAl+ +++ +e+ P++
  MMETSP1325-20131115|2101_1 167 EALDIFQEIIEIKPDH 182
                 89************96 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0     8e-11   7.9e-08       4      76 ..      22      94 ..      18      96 .. 0.88
   2 !   20.4   0.0   3.4e-07   0.00033       3      74 ..      62     133 ..      60     137 .. 0.93
   3 !    9.9   0.0   0.00063      0.62       8      76 ..     108     179 ..      97     181 .. 0.81

  Alignments for each domain:
  == domain 1    score: 32.0 bits;  conditional E-value: 8e-11
   PF13424.1  4 latilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                l+++l+n++ +l   g++ eA ++ye++++l      +++  ++++l+n++  +l  gd +e+ +++e+++e +
  MMETSP1325-20131115|2101_1 22 LNKVLYNMGASLTGAGQLREAKDCYEQVVDLdP-DSEEANQALVTTLYNIGVELLNNGDCEESCDWFEQVIERD 94
                6789***************************55.5555566689**************************9975 PP

  == domain 2    score: 20.4 bits;  conditional E-value: 3.4e-07
   PF13424.1   3 dlatilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                  l t+l+n++  l+  gd +e+ +++e+++e    ++d+   ++ a +n +  +l +g+  eA+e ++  le
  MMETSP1325-20131115|2101_1  62 ALVTTLYNIGVELLNNGDCEESCDWFEQVIERDPDHKDAYEGLVIAQYNQGVELLNQGQAHEAVERFQMILE 133
                 56699***************************99*********************************98887 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00063
   PF13424.1   8 lnnlalvlrrlgdydeAlelyekalellrelgddhpdtara....lnnlanlylalgdydeAleylekAleia 76 
                  +n +  l+ +g+ +eA e ++  le  +e gd h+ + +a     +n a + l  g   eAl+ +++ +ei 
  MMETSP1325-20131115|2101_1 108 QYNQGVELLNQGQAHEAVERFQMILEN-SEGGDLHGSIMDAlvtaKYNFAVTALNDGSPFEALDIFQEIIEIK 179
                 5677888899***************99.4677766665555222269**********************9996 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   2.1e-06     0.002       2      33 .]      25      56 ..      24      56 .. 0.96
   2 !   12.8   0.0   0.00011      0.11       3      33 .]      67      97 ..      65      97 .. 0.93
   3 !    8.1   0.0    0.0038       3.7       2      29 ..     107     134 ..     106     135 .. 0.93
   4 ?    2.9   0.0      0.16   1.6e+02       3      32 ..     152     181 ..     150     182 .. 0.77

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 2.1e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT- CS
   PF13174.1  2 AlyklalsyyklgdtdeAlealerlikeyPdS 33
                +ly+++ s+  +g+ +eA++ +e++++  PdS
  MMETSP1325-20131115|2101_1 25 VLYNMGASLTGAGQLREAKDCYEQVVDLDPDS 56
                79*********99******************9 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 0.00011
                HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT- CS
   PF13174.1  3 lyklalsyyklgdtdeAlealerlikeyPdS 33
                ly+++  ++++gd +e+++ +e++i++ Pd+
  MMETSP1325-20131115|2101_1 67 LYNIGVELLNNGDCEESCDWFEQVIERDPDH 97
                89***9999988*****************96 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.0038
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   2 AlyklalsyyklgdtdeAlealerlike 29 
                 A+y+++  ++++g++ eA+e ++ ++++
  MMETSP1325-20131115|2101_1 107 AQYNQGVELLNQGQAHEAVERFQMILEN 134
                 899***9999999***********9986 PP

  == domain 4    score: 2.9 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   3 lyklalsyyklgdtdeAlealerlikeyPd 32 
                  y+ a   ++ g + eAl++++++i+  Pd
  MMETSP1325-20131115|2101_1 152 KYNFAVTALNDGSPFEALDIFQEIIEIKPD 181
                 566777777756899**********97665 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.2e-05     0.021       2      42 ..      28      68 ..      27      72 .. 0.89
   2 !   10.7   0.0   0.00063      0.61       3      45 ..      70     112 ..      68     138 .. 0.87
   3 !   10.7   0.0    0.0006      0.58       1      65 []     109     183 ..     109     183 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 2.2e-05
   PF13432.1  2 alArallraGdydeAlaaleaalalaPeaaeallllaeall 42
                  + +l  aG+++eA +++e++++l+P+  ea ++l  +l+
  MMETSP1325-20131115|2101_1 28 NMGASLTGAGQLREAKDCYEQVVDLDPDSEEANQALVTTLY 68
                56778889*************************99988777 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00063
   PF13432.1   3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlg 45 
                  + +ll++Gd +e  + +e++++++P++ +a+ +l  a + +g
  MMETSP1325-20131115|2101_1  70 IGVELLNNGDCEESCDWFEQVIERDPDHKDAYEGLVIAQYNQG 112
                 578899*****************************99999885 PP

  == domain 3    score: 10.7 bits;  conditional E-value: 0.0006
   PF13432.1   1 lalArallraGdydeAlaaleaalala..........PeaaeallllaeallrlgrldeAaallraalalaPddp 65 
                 + ++ +ll++G+  eA++ ++ +l++              + a+++ a+++l  g + eA+  +++++++ Pd++
  MMETSP1325-20131115|2101_1 109 YNQGVELLNQGQAHEAVERFQMILENSeggdlhgsimDALVTAKYNFAVTALNDGSPFEALDIFQEIIEIKPDHA 183
                 678999**************9999999888776666666**********************99999999999975 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   4.2e-06    0.0041       4      42 ..      26      64 ..      24      66 .. 0.92
   2 !   10.4   0.0    0.0008      0.78       4      41 ..      67     104 ..      64     107 .. 0.87
   3 ?    1.1   0.0       0.8   7.8e+02       4      30 ..     108     134 ..     105     140 .. 0.80
   4 ?    2.7   0.0      0.24   2.4e+02      11      37 ..     159     185 ..     150     194 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 4.2e-06
   PF13428.1  4 llalarallalGdpdeAiallrralalaPddaealllLa 42
                l+ +++ l  +G++ eA +++++++ l+Pd++ea  +L 
  MMETSP1325-20131115|2101_1 26 LYNMGASLTGAGQLREAKDCYEQVVDLDPDSEEANQALV 64
                7889999***************************99986 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.0008
   PF13428.1   4 llalarallalGdpdeAiallrralalaPddaealllL 41 
                 l+  +  ll++Gd +e  ++++++++++Pd+ +a+  L
  MMETSP1325-20131115|2101_1  67 LYNIGVELLNNGDCEESCDWFEQVIERDPDHKDAYEGL 104
                 5666777999***********************99877 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.8
   PF13428.1   4 llalarallalGdpdeAiallrralal 30 
                 ++  +  ll++G+  eA++ ++ +l+ 
  MMETSP1325-20131115|2101_1 108 QYNQGVELLNQGQAHEAVERFQMILEN 134
                 5566667899*********99999875 PP

  == domain 4    score: 2.7 bits;  conditional E-value: 0.24
   PF13428.1  11 llalGdpdeAiallrralalaPddaea 37 
                  l+ G p eA++ ++++++  Pd+ae 
  MMETSP1325-20131115|2101_1 159 ALNDGSPFEALDIFQEIIEIKPDHAES 185
                 567788889**************9985 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   7.5e-05     0.073       3      33 ..      25      55 ..      23      57 .. 0.91
   2 !    7.5   0.0    0.0034       3.3       3      34 .]      66      97 ..      64      97 .. 0.94
   3 ?    0.8   0.0      0.46   4.5e+02       5      22 ..     109     126 ..     107     133 .. 0.88
   4 ?    3.2   0.0      0.08        78      19      34 .]     167     182 ..     151     182 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 7.5e-05
                -TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekalelkpr 33
                ++yn+G  +   G+  +Ak ++e++++l+p+
  MMETSP1325-20131115|2101_1 25 VLYNMGASLTGAGQLREAKDCYEQVVDLDPD 55
                789999999999*****************95 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0034
                -TTT---HHHHTT-HHHHHHHHH---HHHH.H CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekalelkprn 34
                ++yn+G  ++++Gd +++   +e+++e +p++
  MMETSP1325-20131115|2101_1 66 TLYNIGVELLNNGDCEESCDWFEQVIERDPDH 97
                69***************************975 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.46
                 TT---HHHHTT-HHHHHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAke 22 
                 yn+G  +++ G+ ++A e
  MMETSP1325-20131115|2101_1 109 YNQGVELLNQGQAHEAVE 126
                 99*************987 PP

  == domain 4    score: 3.2 bits;  conditional E-value: 0.08
                 HHHHHHH---HHHH.H CS
   PF13181.1  19 kAkeylekalelkprn 34 
                 +A+  +++++e+kp++
  MMETSP1325-20131115|2101_1 167 EALDIFQEIIEIKPDH 182
                 89999*********85 PP

>> PF08631.5  Meiosis protein SPO22/ZIP4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   4.3e-08   4.2e-05       6      65 ..      36      93 ..      31     138 .. 0.81
   2 ?    1.4   0.0      0.12   1.2e+02      31     128 ..     101     196 ..      96     210 .. 0.60

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 4.3e-08
   PF08631.5  6 egdldlAehllskakslknlldpdlteeLarvlyniGkellerktdfseavkwlkraldl 65
                +g+l  A+++++++ +l+   + +    L+ +lyniG+ell++  d +e+ +w++++++ 
  MMETSP1325-20131115|2101_1 36 AGQLREAKDCYEQVVDLD-PDSEEANQALVTTLYNIGVELLNNG-DCEESCDWFEQVIER 93
                689999************.888888899****************.***********9875 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.12
   PF08631.5  31 teeLarvlyniGkellerktdfseavkwlkraldlleklakidqkstels.elkfsvlrllakalletgesesvlkakkvlsll..esefpnkpelylLal 128
                 +e L+   yn G+ell++  ++ eav  ++ +l+     ++ + ++ + + +l  + + + ++al + + +e ++ +++ +++     e  + +e+  L++
  MMETSP1325-20131115|2101_1 101 YEGLVIAQYNQGVELLNQG-QAHEAVERFQMILEN----SEGGDLHGSIMdALVTAKYNFAVTALNDGSPFEALDIFQEIIEIKpdHAESVEGIEMAKLNI 196
                 5556666788899999999.888888777777666....44444444333034444455666666666666666666666665544444444455555555 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.45   4.4e+02      15      33 ..      25      43 ..      22      44 .. 0.92
   2 !    7.9   0.0    0.0036       3.5       1      27 [.      45      71 ..      45      83 .. 0.69
   3 !    7.0   0.0    0.0069       6.8       2      32 ..      87     124 ..      86     126 .. 0.65
   4 ?   -0.5   0.0       1.8   1.7e+03       2      15 ..     172     185 ..     171     186 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.45
   PF13431.1 15 aynnLAelllnnGdleeAe 33
                +++n++  l  +G+l+eA+
  MMETSP1325-20131115|2101_1 25 VLYNMGASLTGAGQLREAK 43
                79***************97 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0036
   PF13431.1  1 lyekaleldPnnadaynnLAelllnnG 27
                +ye+ ++ldP++ +a ++L ++l+n+G
  MMETSP1325-20131115|2101_1 45 CYEQVVDLDPDSEEANQALVTTLYNIG 71
                8***********777777777666544 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.0069
   PF13431.1   2 yekaleldPnn.......adaynnLAelllnnGdleeA 32 
                 +e+ +e+dP++       + a +n ++ lln+G+  eA
  MMETSP1325-20131115|2101_1  87 FEQVIERDPDHkdayeglVIAQYNQGVELLNQGQAHEA 124
                 8999*******445555555555555555577777766 PP

  == domain 4    score: -0.5 bits;  conditional E-value: 1.8
   PF13431.1   2 yekaleldPnnada 15 
                 +++ +e+ P++a++
  MMETSP1325-20131115|2101_1 172 FQEIIEIKPDHAES 185
                 7899*******985 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00095      0.93       2      35 ..      26      57 ..      25      58 .. 0.91
   2 !    7.0   0.0    0.0052       5.1       1      35 [.      66      98 ..      66      99 .. 0.95
   3 ?   -0.4   0.0       1.2   1.2e+03       2      16 ..     115     129 ..     110     139 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00095
   PF13176.1  2 llnLarlysrlgdyekAielyeraLaltkdplda 35
                l+n++   +  g+ ++A ++ye+  +++ dp+ +
  MMETSP1325-20131115|2101_1 26 LYNMGASLTGAGQLREAKDCYEQ--VVDLDPDSE 57
                899999999**************..**9999875 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0052
   PF13176.1  1 allnLarlysrlgdyekAielyeraLaltkdplda 35
                +l+n+++   + gd e+  + +e+  ++++dp+++
  MMETSP1325-20131115|2101_1 66 TLYNIGVELLNNGDCEESCDWFEQ--VIERDPDHK 98
                799*********************..******986 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 1.2
   PF13176.1   2 llnLarlysrlgdye 16 
                 lln +++++++ +++
  MMETSP1325-20131115|2101_1 115 LLNQGQAHEAVERFQ 129
                 556666666666555 PP

>> PF08324.6  PUL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0092         9     152     224 ..      44     107 ..      18     122 .. 0.73
   2 ?    7.1   0.0    0.0019       1.8     167     214 ..     137     185 ..     109     192 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0092
                 HTHHHHS-S--SS--HHHHHHHHHHHHHHHHHHHHHH-----TTHHH.HHHHHHHH-HHHHTSHHHHHHHHHH CS
   PF08324.6 152 dsildllsvlkssllaenknlqiAlatlllNlavlllennsdeeakaellasilealseeesdeEalyRllvA 224
                 d+  + + +l+      +   + Al t l+N+ v ll+n  d+e   + +++++e   +    ++a  +l++A
  MMETSP1325-20131115|2101_1  44 DCYEQVV-DLDP----DSEEANQALVTTLYNIGVELLNNG-DCEESCDWFEQVIE---RDPDHKDAYEGLVIA 107
                 4333332.3333....35778889****************.****999*****99...555666777666666 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0019
                 H..HHHHHHHHHHHHHHHHHHHHH-----TTHHH.HHHHHHHH-HHHHTS CS
   PF08324.6 167 a..enknlqiAlatlllNlavlllennsdeeakaellasilealseeesd 214
                     + +++ Al t+ +N+av++l++ s+ ea   +++ i+e+  + +++
  MMETSP1325-20131115|2101_1 137 GgdLHGSIMDALVTAKYNFAVTALNDGSPFEALD-IFQEIIEIKPDHAES 185
                 3446788899*****************9*99999.*******94433333 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0091       8.9       5      30 ..      26      51 ..      25      52 .. 0.92
   2 ?    3.4   0.0      0.07        69       3      30 ..      65      92 ..      63      93 .. 0.92
   3 ?   -2.3   0.1       4.3   4.2e+03       6      26 ..     109     129 ..     107     133 .. 0.72
   4 ?   -0.3   0.0         1     1e+03       5      31 ..     152     178 ..     148     179 .. 0.80
   5 ?   -1.9   1.2       3.3   3.3e+03      15      30 ..     825     840 ..     823     846 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0091
   PF13374.1  5 lnnLAlalrargryeeAlaleeeala 30
                l n +  l   g+++eA + +e++++
  MMETSP1325-20131115|2101_1 26 LYNMGASLTGAGQLREAKDCYEQVVD 51
                67999******************986 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.07
   PF13374.1  3 aalnnLAlalrargryeeAlaleeeala 30
                ++l n+++ l + g+ ee  +++e++ +
  MMETSP1325-20131115|2101_1 65 TTLYNIGVELLNNGDCEESCDWFEQVIE 92
                79***********************976 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 4.3
   PF13374.1   6 nnLAlalrargryeeAlalee 26 
                  n ++ l ++g+  eA++ ++
  MMETSP1325-20131115|2101_1 109 YNQGVELLNQGQAHEAVERFQ 129
                 566777889999999987665 PP

  == domain 4    score: -0.3 bits;  conditional E-value: 1
   PF13374.1   5 lnnLAlalrargryeeAlaleeealai 31 
                   n A++  + g   eAl++++e+ +i
  MMETSP1325-20131115|2101_1 152 KYNFAVTALNDGSPFEALDIFQEIIEI 178
                 567777777888888********9988 PP

  == domain 5    score: -1.9 bits;  conditional E-value: 3.3
   PF13374.1  15 rgryeeAlaleeeala 30 
                 +g++++A + e++a++
  MMETSP1325-20131115|2101_1 825 LGERGAAADAERAARE 840
                 6777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (857 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       885  (0.0647308); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 1.40u 0.35s 00:00:01.75 Elapsed: 00:00:00.79
# Mc/sec: 2599.59
//
Query:       MMETSP1325-20131115|2108_1  [L=531]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-23   83.6   0.0    1.9e-23   82.8   0.0    1.4  1  PF00535.21 Glycosyl transferase family 2
    1.8e-13   50.7   0.0    2.8e-13   50.1   0.0    1.3  1  PF13641.1  Glycosyltransferase like family 2
    3.3e-13   49.2   0.0    6.1e-13   48.3   0.0    1.4  1  PF13506.1  Glycosyl transferase family 21
    3.5e-07   29.4   0.0      5e-07   28.9   0.0    1.2  1  PF10111.4  Glycosyltransferase like family 2
  ------ inclusion threshold ------
      0.015   15.5   0.0      0.024   14.8   0.0    1.3  1  PF13704.1  Glycosyl transferase family 2


Domain annotation for each model (and alignments):
>> PF00535.21  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.8   0.0   6.9e-27   1.9e-23       1     168 [.     100     272 ..     100     273 .. 0.91

  Alignments for each domain:
  == domain 1    score: 82.8 bits;  conditional E-value: 6.9e-27
                 EEEEEESS-TTTHHHHHHHHHT-.S---EEEEEEE-S--HHHHHHHGGGGG..E------HHHHHS....-.HHHHHHHHHHHH----EEEEEETTEEE-TTHHHHHHHHHHH.-T..T--EEEEEEEEEEE-----.....EEEEEEE---S-BS--TTTS-GGGEEEEHHH... CS
  PF00535.21   1 sviiptyNeekylletlesllnq.typnfeiivvDDgStDetveileeyak..sdprvrvirlekn....v.GkagarnaglkkatgdyilflDaDdepdpdwleklveklekdgadvvigsrvrifgetdpnkrnlrvrelellykkirkrslglnlsfligsnallrrealeel 168
                 svi p+yNe + +++ +es+l+  + pn+e ivvDD S+Det++ l++ ++  +dpr+  +  +++    + Gk  a+ +g++ a+gdy+lf D+D+++ p++l ++v+ + k +++ v    + +f+   ++++n+       + +     + +++  + +g + l++re ++el
  MMETSP1325-20131115|2108_1 100 SVIFPAYNEGDGIAQIVESALDStDSPNVEFIVVDDRSKDETWAELQRVKEarKDPRFVPVAGKERgkvyWkGKNWAVAQGADVAKGDYLLFADSDVTLYPGALDDFVASMTKANVGWVSFLPKTTFSCFAEYMFNWP---GTCIAQGLIPAKVNNGKVYAFGQCNLFKRETYDEL 272
                 8****************************************************9999999887776666645999*****************************************9999999999999999999975...89999999999999999999999999999887776 PP

>> PF13641.1  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0     1e-16   2.8e-13       3     136 ..      99     237 ..      96     318 .. 0.75

  Alignments for each domain:
  == domain 1    score: 50.1 bits;  conditional E-value: 1e-16
   PF13641.1   3 vavvvptlneddvlarvlesilaldyaprlevivvvdgsdaetldvaeelaaaypdvrvrvvvrp.rnpgp...tgkaralnealqaiksdlvlllDaDsvvdpdtlrrllpfflskgvglvq.gpv..lvlarrsllsal 136
                 ++v+ p++ne+d +a+ +es+l ++ +p++e+ivv+d+s++et +++++  +a +d   r v+++ +++g+   +gk +a++++ + +k+d++l+ D+D+ + p++l  +++ + +++vg v   p+  +++ +++++++ 
  MMETSP1325-20131115|2108_1  99 LSVIFPAYNEGDGIAQIVESALDSTDSPNVEFIVVDDRSKDETWAELQRVKEARKDP--RFVPVAgKERGKvywKGKNWAVAQGADVAKGDYLLFADSDVTLYPGALDDFVASMTKANVGWVSfLPKttFSCFAEYMFNWP 237
                 79********************99777******************999999999997..555554233443222678888888888899*********************9999888999988766643333566666644 PP

>> PF13506.1  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   0.0   2.2e-16   6.1e-13      16     146 ..     171     303 ..     158     323 .. 0.85

  Alignments for each domain:
  == domain 1    score: 48.3 bits;  conditional E-value: 2.2e-16
   PF13506.1  16 npKvnnllqaleaakydllvisDsdvlvdpdyLeellaaledpkvglVtalpvgadekglaaaleaafl.....ntlagvlaa.l.kgagfavGksmalrreaLeaiggfealkdyLAeDyalgkllraaglkvvlsp 146
                 + K + + q+ + ak d+l+++Dsdv++ p +L++++a +++ +vg+V+ lp     k++++ ++  ++      + +g++ a + +g   a+G++ +++re+ +++gg +++++  Ae +al++l  ++ +  ++  
  MMETSP1325-20131115|2108_1 171 KGKNWAVAQGADVAKGDYLLFADSDVTLYPGALDDFVASMTKANVGWVSFLP-----KTTFSCFAEYMFnwpgtCIAQGLIPAkVnNGKVYAFGQCNLFKRETYDELGGHREIGHLVAESHALAALAVEKRIPFRCQC 303
                 6699999*****************************************9987.....66677775444437765677999999852699************************************9999888877766 PP

>> PF10111.4  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   1.8e-10     5e-07       1     185 [.     100     274 ..     100     280 .. 0.69

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 1.8e-10
   PF10111.4   1 svIiPvrlseekrdilerlqsilarlkefrsdeeveilvvdndssesfakelkkiiakngaiky..ishktekdlfspak..aRNrgaeksesdvilflDvDllisedllekiikkvkelsknnnaflvlpvlylskegsekflkqektllreeiledlltgkstlvefialasscilinrdiFlkiGG 185
                 svI P+++++  + i + + s l +++     ++ve++vvd+ s++++  el+++ ++++      +  k+  +++  +k  a  +ga  +++d++lf D D+++++  l++ +    +++k n    v  v++l k   + f ++    +   +  + l  ++   +++     c l++r+ + ++GG
  MMETSP1325-20131115|2108_1 100 SVIFPAYNEG--DGIAQIVESALDSTDS----PNVEFIVVDDRSKDETWAELQRVKEARKDPRFvpVAGKERGKVYWKGKnwAVAQGADVAKGDYLLFADSDVTLYPGALDDFVA---SMTKAN----VGWVSFLPKTTFSCFAEYM-FNWPGTCIAQGLIPAKVNNGKVYAFGQCNLFKRETYDELGG 274
                 89******99..6687777666666666....9***********99999988888887765443115788889999777644777899999*********************999...565555....3344555555444444433.44544444444443333333344444666777777777776 PP

>> PF13704.1  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   8.9e-06     0.024      21      81 ..     129     195 ..     106     206 .. 0.63

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 8.9e-06
   PF13704.1  21 riliydndstDgtaeilkrlpdvk.llrhd...dpyederrq..velrkalakryaeadwvlvlDaD 81 
                 +++++d+ s+D+t++ l+r ++++   r++   ++ + + ++   +++ a  +++a++d++l++D+D
  MMETSP1325-20131115|2108_1 129 EFIVVDDRSKDETWAELQRVKEARkDPRFVpvaGKERGKVYWkgKNWAVAQGADVAKGDYLLFADSD 195
                 59************9999986655333333111222333333213455556667899*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.87u 0.38s 00:00:01.25 Elapsed: 00:00:00.59
# Mc/sec: 2156.72
//
Query:       MMETSP1325-20131115|2105_1  [L=643]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-11   41.5   0.0    1.4e-09   37.8   0.0    2.5  2  PF00307.26 Calponin homology (CH) domain
    2.5e-07   30.3   0.0    9.6e-05   21.9   0.0    2.5  2  PF01546.23 Peptidase family M20/M25/M40


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.064   4.4e+02      87     105 ..       2      19 ..       1      23 [. 0.86
   2 !   37.8   0.0     2e-13   1.4e-09       2     107 ..      38     134 ..      37     136 .. 0.91

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.064
                 HHHTST-HHHHHHHHHHHH CS
  PF00307.26  87 dllysgnkknvlaflaeLf 105
                 d++ +gn+++vl++l++ +
  MMETSP1325-20131115|2105_1   2 DIV-DGNETLVLGMLWSTI 19 
                 999.************865 PP

  == domain 2    score: 37.8 bits;  conditional E-value: 2e-13
                 HHHHHHHHHHHTTSTCTSSHSHHHHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS-HHHHHTST-HHHHHHHHHHHHHH CS
  PF00307.26   2 dallrWinkvlekleqsrqvenlskdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvltledllysgnkknvlaflaeLfrr 107
                 +++lrW++k++  ++ ++ v+nl++d+++G+ ++a+l+ + p   +++    +      d ++Nl+ a++ aeek+gv+ + ++ed    +++k ++  lae+++r
  MMETSP1325-20131115|2105_1  38 NKILRWVKKHTDPYD-DLDVTNLTSDFASGAPFLAILNNVNPSGSPYNPS--D------DPVDNLKRAFKDAEEKYGVPMLIDPEDPDFWKDEKAMIPQLAEFMKR 134
                 789***********5.9*************************98888887..6......9**************************86689999999999998887 PP

>> PF01546.23  Peptidase family M20/M25/M40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0014       9.4      16      54 ..     248     298 ..     219     301 .. 0.83
   2 !   21.9   0.0   1.4e-08   9.6e-05      72     169 ..     506     618 ..     445     619 .. 0.76

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0014
                 S..........EE----HCCHHHHHHHHHHHHHHHH..HCCC-SCEEEEEE CS
                 x..........xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxx RF
  PF01546.23  16 k..........lygrGaddmkggllaalaalealae..agtklkgtvellf 54 
                 k          + + G++ +k+++la + a++a+ +      l+++v++++
  MMETSP1325-20131115|2105_1 248 KpfepvvdndrMTAKGVAEDKSHVLAPINAVKAIMDtvGSNGLPVNVKVVV 298
                 1455555566899*********************99877778888888886 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 1.4e-08
                 H......EEEEEECCEEHHHHTCSSE...EHHHH.HHHHHHHHHHCCCG..CEEEEEE----THHHHTT......TSEEEEEEE--B-TTTTSTT--B-CCHHHHHHHHHHHHH CS
                 x......xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01546.23  72 a......alglhidlgivgepseedg...tendaelvqalekaaeelgl..kveplvsgggtdasfiarv.....glgfpmiglgpgngtaHspnEkvdlddlekgievlaell 169
                 a      a++ +  +g+++e+s+++g    ++d+  +q ++ ++e +g    ++p+vs g  +  +i  v     g ++ m g+  +++ +H+ nE + l+d+++ i++++++l
  MMETSP1325-20131115|2105_1 506 AyakltaAIEANVGYGVSLEFSDKKGepgWVSDP-THQFFKSVCESMGKqfAPKPSVSAGNPEYKPIPAVfancfGKPTYMHGINDSDRKIHHANESMALEDVRREIRAFVKTL 618
                 1333443588899999999999999999844566.788888888888888899********999999986799654455555555555********************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (643 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.00u 0.40s 00:00:01.40 Elapsed: 00:00:00.71
# Mc/sec: 2170.22
//
Query:       MMETSP1325-20131115|2109_1  [L=678]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-10   39.6   0.2    2.6e-06   27.0   0.0    2.8  3  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   5.1e-05       0.7      60      84 ..      31      55 ..      23      56 .. 0.85
   2 !   27.0   0.0   1.9e-10   2.6e-06       2      85 .]     157     246 ..     156     246 .. 0.82
   3 ?   -2.8   0.0      0.38   5.2e+03      27      43 ..     368     382 ..     366     384 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 5.1e-05
                GGGTEEEEEEEECHSSSCSEE---E CS
  PF00168.25 60 eelaeleleVkdedrfgkddflGea 84
                +  + le++V+d+d +++dd++G++
  MMETSP1325-20131115|2109_1 31 PGASVLEISVYDYDWLTSDDLIGTT 55
                55566******************85 PP

  == domain 2    score: 27.0 bits;  conditional E-value: 1.9e-10
                 EEEEEEESS--S-STSSSS-EEEEEEEECTTE...EEEEE--BSS-SSEEEEEEEEEEESCGGGTE....EEEEEEECHSSSC.SEE---EE CS
  PF00168.25   2 kvkvieAknLpnkdkngtsdpyvkvslggaks...kkkrTrvikntlnPvWnekftfevvaeelae....leleVkdedrfgk.ddflGeak 85 
                 +v v++ k+ p+ d  g+ d yvk +lg++     +  r +  k + n +W+ k +++   ++++e    l+++++d+d   + ddf+Geak
  MMETSP1325-20131115|2109_1 157 RVIVYKTKDVPSSDFGGFADLYVKGKLGDQCLrtdNHVRAQNGKGSFNWRWKFKTMLP--LPSMSEglgiLTVQCWDWDFPLTeDDFIGEAK 246
                 799**************************66664444666666777777777666666..888888889**********87666*****985 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 0.38
                 EEECTTEEEEEE--BSS CS
  PF00168.25  27 slggakskkkrTrvikn 43 
                 +l +    kkrT+v ++
  MMETSP1325-20131115|2109_1 368 KLPPV--RKKRTKVLPK 382
                 56664..459***9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       882  (0.0645114); expected 273.4 (0.02)
Passed bias filter:                      510  (0.0373025); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.15u 0.32s 00:00:01.47 Elapsed: 00:00:00.57
# Mc/sec: 2801.26
//
Query:       MMETSP1325-20131115|2111_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-08   31.4   0.0    9.9e-08   31.3   0.0    1.0  1  PF00069.20 Protein kinase domain
     0.0019   17.2   0.0     0.0019   17.2   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   1.4e-11   9.9e-08     170     245 ..       2      78 ..       1      79 [] 0.75

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 1.4e-11
                 HHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--...GGGGCSHHHHHHHHHHHHHT-SSG CS
  PF00069.20 170 llkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkklee...depkssskseelkdlikkllekdp 245
                 l+ ++++  ++D+WslG++lyel+  + pf+++   ++ +l+ +i ++++++    e ++ + s+++ ++++ +l++d 
  MMETSP1325-20131115|2111_1   2 LR-GEGHHFASDIWSLGCLLYELAHLRSPFQQK-GLTMDRLFLNIVNGDYPKiggGETQHLNYSQNMVSMVEGMLQTDS 78 
                 45.889999**********************99.556666666665555444111566666667999999999999885 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.7e-07    0.0019     183     209 ..       8      33 ..       1      73 [. 0.78

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.7e-07
                 EHHHHHHH---HHHHHHTTT-GTTTTS CS
  PF07714.12 183 tsksDvWsfGvllwEiftlgespypgl 209
                   +sD+Ws G+ll+E++ l  sp+++ 
  MMETSP1325-20131115|2111_1   8 HFASDIWSLGCLLYELAHLR-SPFQQK 33 
                 679**************976.776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 394.40
//
Query:       MMETSP1325-20131115|2106_1  [L=414]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-05   22.0   0.7    9.8e-05   22.0   0.5    3.3  3  PF01485.16 IBR domain
  ------ inclusion threshold ------
       0.23   10.8   4.9       0.19   11.0   1.3    2.0  2  PF12230.3  Pre-mRNA splicing factor PRP21 like protein
        2.9    7.7  18.6      0.071   12.9   1.8    3.6  4  PF00643.19 B-box zinc finger
        3.7    6.8   7.5        5.7    6.2   5.2    1.2  1  PF14153.1  Spore coat protein CotO
        6.8    6.6   9.9        2.6    7.9   0.4    3.0  3  PF07975.7  TFIIH C1-like domain


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.41   1.1e+03      38      48 ..     117     126 ..      86     128 .. 0.73
   2 ?    3.9   1.3     0.015        42      20      48 ..     214     240 ..     204     242 .. 0.72
   3 !   22.0   0.5   3.6e-08   9.8e-05      20      64 .]     279     370 ..     258     370 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.41
  PF01485.16  38 kssvtCskCgf 48 
                 +  +tC+ C  
  MMETSP1325-20131115|2106_1 117 E-PFTCPACYD 126
                 3.389999966 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.015
  PF01485.16  20 wCprpdCeaiiekekgakkssvtCskCgf 48 
                  C   +C a +  ++ ++k+ vtC++C++
  MMETSP1325-20131115|2106_1 214 LC--RECFARMAGSQLDAKQLVTCPTCHQ 240
                 45..34777777777777779******86 PP

  == domain 3    score: 22.0 bits;  conditional E-value: 3.6e-08
  PF01485.16  20 wCprpdCeaiiekekgakks...............................................svtCskCgfefCflCkkewHeglsC 64 
                  Cp+pdC +   +  + +++                                                + C+ C++++C+ C+ e+H g+sC
  MMETSP1325-20131115|2106_1 279 SCPTPDCPNRRIVPANFDPKtlastgflaassgrrggllawlkgkrggeaaeddggtgsdlgsdsgrVIWCEACEKRICVPCGVEEHTGFSC 370
                 6******9877777777777789********************************************************************9 PP

>> PF12230.3  Pre-mRNA splicing factor PRP21 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.3   7.1e-05      0.19      76     155 ..      11     103 ..       7     129 .. 0.62
   2 ?   -0.1   0.0      0.17   4.7e+02     162     179 ..     226     243 ..     220     244 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 7.1e-05
   PF12230.3  76 pkPltleelkarsleqkskaleeeeeaaaeeeeeeeeee..edeeeekkeesaeksepk...........vkemkikaaeesrlkirkdykkk 155
                 p+P  le+l++++ eq ++a +e  +a++  e+ee +++  e+ee+e  e +++ +e +           ++e++++a++ ++ k+ + + ++
  MMETSP1325-20131115|2106_1  11 PPPSYLESLSRSTSEQGKAAYSEHLAAQQLAEAEELAKRlaEEEEAEAIEAKRRAEEAEeagltlarrlaAEEEEAAAQAAQQAKVDERAAEE 103
                 78999**************99999999988877777777875555555554444444445665566666544444444444444444333333 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.17
   PF12230.3 162 ekpkkkmikcpitgeliP 179
                 + ++k+ + cp + + +P
  MMETSP1325-20131115|2106_1 226 QLDAKQLVTCPTCHQPVP 243
                 678999*********999 PP

>> PF00643.19  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         1   2.8e+03       4      11 ..     119     126 ..     116     128 .. 0.60
   2 ?    4.7   0.4    0.0093        25      21      30 ..     210     219 ..     208     221 .. 0.88
   3 ?   -0.0   0.2      0.28   7.6e+02       4      11 ..     233     240 ..     230     242 .. 0.55
   4 ?   12.9   1.8   2.6e-05     0.071      16      35 ..     347     366 ..     344     371 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1
  PF00643.19   4 rkCpeHee 11 
                  +Cp + +
  MMETSP1325-20131115|2106_1 119 FTCPACYD 126
                 46666654 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0093
  PF00643.19  21 CqqllCedCl 30 
                 C+ +lC++C+
  MMETSP1325-20131115|2106_1 210 CRDPLCRECF 219
                 *********7 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 0.28
  PF00643.19   4 rkCpeHee 11 
                  +Cp++++
  MMETSP1325-20131115|2106_1 233 VTCPTCHQ 240
                 45666654 PP

  == domain 4    score: 12.9 bits;  conditional E-value: 2.6e-05
  PF00643.19  16 lfCedCqqllCedClleeHk 35 
                 ++Ce C++ +C  C +eeH 
  MMETSP1325-20131115|2106_1 347 IWCEACEKRICVPCGVEEHT 366
                 69*****************5 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.2    0.0021       5.7      48     114 ..      36     102 ..      15     148 .. 0.47

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0021
   PF14153.1  48 ekkkekeeeqkeekaeveseeeaeeaesedeqesseqe..eiaqeve.eeeeeeeekqeevekekeaeke 114
                 ++++  e+e+ ++ +++e+  eae+ e + ++e++e++   +a+    eeee+++++ ++++  +  ++e
  MMETSP1325-20131115|2106_1  36 AAQQLAEAEELAKRLAEEE--EAEAIEAKRRAEEAEEAglTLARRLAaEEEEAAAQAAQQAKVDER-AAE 102
                 2222223333333333333..333333333333333330022222222333333333333322222.222 PP

>> PF07975.7  TFIIH C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.1   3.1e+03      21      27 ..     118     124 ..      99     127 .. 0.74
   2 ?    3.8   0.4     0.018        50       2      29 ..     215     240 ..     213     242 .. 0.71
   3 ?    7.9   0.4   0.00096       2.6      20      37 ..     345     362 ..     331     372 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 1.1
   PF07975.7  21 vyrCekC 27 
                  ++C++C
  MMETSP1325-20131115|2106_1 118 PFTCPAC 124
                 5677777 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.018
   PF07975.7   2 CygCqkklkkkakkkkdssvyrCekCkn 29 
                 C  C  ++  ++ +   ++ ++C++C++
  MMETSP1325-20131115|2106_1 215 CRECFARMAGSQLD--AKQLVTCPTCHQ 240
                 66666666665444..4699******97 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.00096
   PF07975.7  20 svyrCekCknvFCidCDv 37 
                  v  Ce+C++  C+ C v
  MMETSP1325-20131115|2106_1 345 RVIWCEACEKRICVPCGV 362
                 5778************88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1340  (0.0980105); expected 273.4 (0.02)
Passed bias filter:                      587  (0.0429345); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.89u 0.39s 00:00:01.28 Elapsed: 00:00:00.54
# Mc/sec: 1837.21
//
Query:       MMETSP1325-20131115|2107_1  [L=544]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-10   39.0   3.0    2.5e-09   37.1   2.1    1.9  1  PF01145.20 SPFH domain / Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   2.1   1.8e-13   2.5e-09       2     169 ..     220     452 ..     167     466 .. 0.81

  Alignments for each domain:
  == domain 1    score: 37.1 bits;  conditional E-value: 1.8e-13
  PF01145.20   2 tvepgevgvvvrfGkvkrvlepG.lhf.klPfgekvtvvstrvqtldvsdesvtvptkDglnvtvdvtvryrv...sdakkliaav.......................aqeeenlenllrrllesalrevl.......sqmtl..deilsnrselaaelknelneq..........................lqkygievvdvritdvdppp.evkqalakkqaaeaeaa......e 169
                 tv++g+++v + +G+ k+ le G +++ +   ++  + + +++q+ d+++  +++ ++D++ + vd+tv++r+   + a++++a++                       +q e++l +++ ++  s+  +v+        +  +   e++s+ +e +ae+++e +++                           + yg++++++++  + p + ++ ++la+ + a aea+      +
  MMETSP1325-20131115|2107_1 220 TVDEGYAAVTEDNGQQKI-LEGGdTYLlTHRNWKFQKYITQKIQSNDLKR--IQATSADNVLMAVDATVIWRIeqvDTAARMSADTiqkdgrdtatdlgditklsndvlKQSEASLAAFIGAVNYSDTFNVAaavqapeMT--VpmGEVVSGEEETKAEAEEEAQAAkvkpvmssplfdpmglksvvksanlvTNSYGVRIISINVVAAVPADpDLMNSLAQGAVAAAEAQkyetvaR 452
                 8*********99999998.6666455544445544445555599999999..*********************88888888888889999988888877777777777777777788888777777777777777774444..4448888999************7777777777777777777777777888999*********888888888*****9999999999976555442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.34s 00:00:01.20 Elapsed: 00:00:00.55
# Mc/sec: 2370.21
//
Query:       MMETSP1325-20131115|2113_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-33  114.0   0.0    6.7e-33  113.6   0.0    1.1  1  PF02115.12 RHO protein GDP dissociation inhibitor
  ------ inclusion threshold ------
       0.22    9.7   2.1       0.25    9.5   1.5    1.1  1  PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus


Domain annotation for each model (and alignments):
>> PF02115.12  RHO protein GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.6   0.0   9.8e-37   6.7e-33      10     198 ..      90     293 ..      79     294 .] 0.80

  Alignments for each domain:
  == domain 1    score: 113.6 bits;  conditional E-value: 9.8e-37
                 XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX...X...XXXXXXXXX..XSSXTTS-.SEEE---EEE-TT--.--B------..GGGGGGSEEEEE---EEEEEEEEEEESSEB--EEEEEEEEE---EEEEEEEE---B-EESSEEEEE---E...E--B--TT---EEEEEEEEE.TTS-ESEEEEEEEEEE CS
  PF02115.12  10 eaeeeeeekeeeekeveykpppkk.slkeikelDkeDeSLrk...y...KekLLGele..vvedpkep.nVkvtkltllveeap.eieldLtgd..lkelkkklfvlkEgseYrlkisfkVqreivsGLkyvqkvyraglrvdktkemlGsyaPkaeeyeyvtpee...eaPkGvlaRGsYsvkskftD.DDkkdhlelewsleik 198
                  a+  +++   +e+ ++ kp++ k +l e  +  ke + L+    y    ++LLG +   ++ d ++p +V+++++ ++ ++   + ++ L ++  +++lkk+ +++kEgseY+ +i+f+Vq+ei   L y+ +  + g+++++ +e lGsy+P++e++ ++ p++   eaPkG++ R +Y++++kftD D k+ +l++ + ++i+
  MMETSP1325-20131115|2113_1  90 AAA--AASAAADEEPTSVKPSAVKpALXESEQQQKELHDLQNiydYlhdNHELLGAAAsgDLGDTNDPrKVVIEEFRVIFNSGAeDFVTALGDEasIEALKKSGVSIKEGSEYKFRITFRVQHEILDCLVYKVSLSKMGIHLENDEEVLGSYGPRSEPHVVEYPKNdwyEAPKGFMMRATYTAHCKFTDrDGKEVYLDYAYPIKIT 293
                 222..222233344445666664426777777777766666421143335689**999999*******9********99998777******99866899***********************************************************988887764558*******************555999*******9996 PP

>> PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.5   3.6e-05      0.25     264     347 ..      65     154 ..      41     219 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 3.6e-05
   PF07462.6 264 aeakvta.vvtppsadaaaapdsvrpa.gasgaasgstsaptaesvl...Gegaaa.telqvvvklqdydeeddklvvlplfgeddddde 347
                 + a+v + +   + a +a a++++++a +as+aa ++ ++  +  v     e+++   el+   ++ dy  ++ +l+  + +g+  d ++
  MMETSP1325-20131115|2113_1  65 KAAAVKTsAHNVSAAASAKAAEEAKAAaAASAAADEEPTSVKPSAVKpalXESEQQqKELHDLQNIYDYLHDNHELLGAAASGDLGDTND 154
                 334444412222223333333344433034444444443334444444443333333677777788889899988888887776555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       872  (0.06378); expected 273.4 (0.02)
Passed bias filter:                      476  (0.0348157); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.97
# Mc/sec: 726.32
//
Query:       MMETSP1325-20131115|2115_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.003   17.0   0.5        2.2    7.9   0.0    4.4  6  PF12799.2  Leucine Rich repeats (2 copies)
     0.0067   16.1   2.8        2.6    8.3   0.0    5.3  7  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0   0.00032       2.2       4      27 ..      32      56 ..      20      57 .. 0.75
   2 ?   -3.6   0.0       1.2   8.2e+03      11      23 ..      93     106 ..      91     108 .. 0.66
   3 ?   -2.6   0.0      0.58     4e+03      16      27 ..     124     135 ..     117     136 .. 0.65
   4 ?    0.8   0.0      0.05   3.4e+02       8      27 ..     140     160 ..     137     161 .. 0.80
   5 ?    2.0   0.0     0.022   1.5e+02       8      25 ..     165     183 ..     163     186 .. 0.76
   6 ?   -1.0   0.0      0.18   1.3e+03       5      23 ..     187     206 ..     186     209 .. 0.70

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00032
   PF12799.2  4 evLdLsnNnIk.dlppelanLpnLk 27
                ++L+L +N ++   p e++++++L 
  MMETSP1325-20131115|2115_1 32 TELNLGRNTLTgTFPSEIGRMTKLV 56
                6788888888866888888888875 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 1.2
   PF12799.2  11 NnIkd.lppelanL 23 
                 N+ +  lp el++L
  MMETSP1325-20131115|2115_1  93 NSFTGpLPTELGQL 106
                 66664477778887 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 0.58
   PF12799.2  16 lppelanLpnLk 27 
                 lp el++L + k
  MMETSP1325-20131115|2115_1 124 LPTELGQLDQMK 135
                 788899987665 PP

  == domain 4    score: 0.8 bits;  conditional E-value: 0.05
   PF12799.2   8 LsnNnIk.dlppelanLpnLk 27 
                 + +N+   +lp el++L + +
  MMETSP1325-20131115|2115_1 140 FYSNRFNgSLPTELGQLDKME 160
                 5678887789*99****9987 PP

  == domain 5    score: 2.0 bits;  conditional E-value: 0.022
   PF12799.2   8 LsnNnIkdlpp.elanLpn 25 
                 +s N+ +dl p el++L +
  MMETSP1325-20131115|2115_1 165 FSWNSFEDLLPtELGQLDQ 183
                 689*****65527999965 PP

  == domain 6    score: -1.0 bits;  conditional E-value: 0.18
   PF12799.2   5 vLdLsnNnIkdlpp.elanL 23 
                 ++ + +N+ + l p el++L
  MMETSP1325-20131115|2115_1 187 HVVFYSNSFTGLLPtELGQL 206
                 56677899998544269998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00038       2.6       3      20 ..      32      50 ..      30      52 .. 0.87
   2 ?   -1.8   0.0      0.74     5e+03       9      22 .]      67      81 ..      65      81 .. 0.76
   3 ?   -1.0   0.0      0.41   2.8e+03       9      22 .]      92     106 ..      89     106 .. 0.79
   4 ?   -0.5   0.0      0.28   1.9e+03       9      22 .]     117     131 ..     113     131 .. 0.80
   5 ?    0.2   0.0      0.16   1.1e+03       7      22 .]     140     156 ..     137     156 .. 0.79
   6 ?    0.2   0.0      0.17   1.1e+03       7      22 .]     165     181 ..     162     181 .. 0.72
   7 ?   -0.3   0.0      0.24   1.6e+03       4      22 .]     187     206 ..     185     206 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00038
                SEEEETSSBCB.CHHHHHH CS
  PF00560.28  3 eeLdLsgNnlt.slppsls 20
                +eL+L +N lt ++p++++
  MMETSP1325-20131115|2115_1 32 TELNLGRNTLTgTFPSEIG 50
                79*********99**9876 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.74
                SSBCB.CHHHHHHHH CS
  PF00560.28  9 gNnlt.slppslsnL 22
                +N lt  lp +l++L
  MMETSP1325-20131115|2115_1 67 SNTLTgPLPTELGQL 81
                688998899987765 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.41
                 SSBCB.CHHHHHHHH CS
  PF00560.28   9 gNnlt.slppslsnL 22 
                 +N++t  lp +l++L
  MMETSP1325-20131115|2115_1  92 SNSFTgPLPTELGQL 106
                 799998999988765 PP

  == domain 4    score: -0.5 bits;  conditional E-value: 0.28
                 SSBCB.CHHHHHHHH CS
  PF00560.28   9 gNnlt.slppslsnL 22 
                 +N++t  lp +l++L
  MMETSP1325-20131115|2115_1 117 SNRFTgPLPTELGQL 131
                 699999999988765 PP

  == domain 5    score: 0.2 bits;  conditional E-value: 0.16
                 ETSSBCB.CHHHHHHHH CS
  PF00560.28   7 LsgNnlt.slppslsnL 22 
                 + +N++  slp +l++L
  MMETSP1325-20131115|2115_1 140 FYSNRFNgSLPTELGQL 156
                 67899999999988765 PP

  == domain 6    score: 0.2 bits;  conditional E-value: 0.17
                 ETSSBCBC.HHHHHHHH CS
  PF00560.28   7 LsgNnlts.lppslsnL 22 
                 +s N++++ lp +l++L
  MMETSP1325-20131115|2115_1 165 FSWNSFEDlLPTELGQL 181
                 79999996477667765 PP

  == domain 7    score: -0.3 bits;  conditional E-value: 0.24
                 EEEETSSBCB.CHHHHHHHH CS
  PF00560.28   4 eLdLsgNnlt.slppslsnL 22 
                 +  + +N++t  lp +l++L
  MMETSP1325-20131115|2115_1 187 HVVFYSNSFTgLLPTELGQL 206
                 66678899997788877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 949.50
//
Query:       MMETSP1325-20131115|2112_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 164.46
//
Query:       MMETSP1325-20131115|2114_1  [L=445]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       543  (0.0397162); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.68
# Mc/sec: 1568.20
//
Query:       MMETSP1325-20131115|2117_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       551  (0.0403013); expected 273.4 (0.02)
Passed bias filter:                      484  (0.0354008); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1298.03
//
Query:       MMETSP1325-20131115|2119_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-13   50.4   0.0    2.4e-13   50.0   0.0    1.2  1  PF13621.1  Cupin-like domain
    8.2e-07   28.4   0.1    1.3e-06   27.8   0.1    1.3  1  PF08007.7  Cupin superfamily protein
    9.9e-06   25.6   0.5    0.00058   19.9   0.4    2.3  1  PF02373.17 JmjC domain, hydroxylase
  ------ inclusion threshold ------
      0.092   12.1   0.0       0.22   10.9   0.0    1.6  1  PF07883.6  Cupin domain


Domain annotation for each model (and alignments):
>> PF13621.1  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   7.1e-17   2.4e-13     133     232 ..     134     271 ..      66     282 .. 0.73

  Alignments for each domain:
  == domain 1    score: 50.0 bits;  conditional E-value: 7.1e-17
   PF13621.1 133 n.............................................lWlGnsasssslHhDh..yeNlycvvsGrKrftLfppsdapklyvasleesgtsvssvdvenpdlekfprfkdakalevelepGevLYlPalWfHeVssss 232
                                                               ++ G+ +  +  H D      + ++vsG+Kr+ L+pp+++p +y +           vdv++pd+e+ p f +a  +e  + +G+++Y P  W+H  ++++
  MMETSP1325-20131115|2119_1 134 GsrrsdtsdidsdadgydrfvwkgeafedtagfipsmlvdvtrwfvVYAGEAGGGMFNHIDRhrTSAWQAQVSGQKRWHLCPPEQTPLMYGRG---------GVDVFAPDYEQSPLFLQADCFEGVVGQGDMVYYPGQWWHATQNLG 271
                 344445555555555555555555555555555555555555555577778888888898984445799*********************555.........69*************************************998885 PP

>> PF08007.7  Cupin superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.1   3.8e-10   1.3e-06     118     206 ..     180     281 ..     154     322 .. 0.71

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 3.8e-10
                 EEEE--------SEE-SSEEEE..EEEE--EEEEEE-...........-SSTT-SS-EE--TTT--....--SEEEEE----EEEE----EEEEE---.....----E CS
   PF08007.7 118 vYatpggsqgvgpHyDdyDVfl..lQleGrkrWrvyk...........ptvpelelkseeplkildef..epvedfvLepGDlLYlPrgviHqgvaed....esltlS 206
                 vYa  +g  g+ +H+D + + +   Q++G+krW++              ++  ++++++ pl     f  +  ++ v  +GD+ Y P +++H  + ++    +sl+lS
  MMETSP1325-20131115|2119_1 180 VYAGEAG-GGMFNHIDRHRTSAwqAQVSGQKRWHLCPpeqtplmygrgGVDVFAPDYEQSPL-----FlqADCFEGVVGQGDMVYYPGQWWHATQNLGstevPSLSLS 281
                 8999999.8*******997655116899********96555554444433333444444444.....4447789******************9876664422444444 PP

>> PF02373.17  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.4   1.7e-07   0.00058       2     107 ..     180     273 ..     179     275 .. 0.83

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.7e-07
                 EEEE-TT-EE-CE--GGG-EEEEEEEEE-EEEEEEE-TTCHHHHHHHHCH-HH---TTGHHCCHCCCHHHHHHHCCG--EEEEE----EEEE----EEEEEEEEEE CS
  PF02373.17   2 lylgmpksttpwhiedqglySinylhfgapkvWyivpsekkeklekvlskknskeqpdllrhlstlispkqlekagipvyrfvqkpgefVfvfpgayHsvfnlgfn 107
                 +y+g  +     hi+ ++++ ++   + ++k W + p+e+   +      +        +     + sp  l+     + + v  +g++V+ +++++H+++nlg++
  MMETSP1325-20131115|2119_1 180 VYAGEAGGGMFNHIDRHRTS-AWQAQVSGQKRWHLCPPEQTPLMYGRGGVD--------VFAPDYEQSPLFLQA---DCFEGVVGQGDMVYYPGQWWHATQNLGST 273
                 688888888999******99.8*****************999887554444........455556666666644...69999*********************986 PP

>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   6.5e-05      0.22      40      65 ..     250     275 ..     247     280 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 6.5e-05
                 EE-TT-EEEE-TT-EBEEB--SSS-E CS
   PF07883.6  40 eleaGdsvyfpagtpHrfrNtgdepa 65 
                 ++++Gd+vy p   +H+  N g++++
  MMETSP1325-20131115|2119_1 250 VVGQGDMVYYPGQWWHATQNLGSTEV 275
                 689*****************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.34s 00:00:00.99 Elapsed: 00:00:00.62
# Mc/sec: 1279.35
//
Query:       MMETSP1325-20131115|2118_1  [L=741]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.6   1.8      0.026   14.1   0.0    2.2  3  PF12937.2 F-box-like


Domain annotation for each model (and alignments):
>> PF12937.2  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.9e-06     0.026       2      37 ..     280     314 ..     279     318 .. 0.90
   2 ?   -3.1   0.0      0.46   6.3e+03       7      28 ..     435     457 ..     434     461 .. 0.71
   3 ?   -4.2   0.1      0.95   1.3e+04      28      34 ..     543     549 ..     543     549 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.9e-06
                 HHS-HHHHHHHHTTS-HHHHHHH----HHHHHHHHT CS
   PF12937.2   2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrvald 37 
                 ++LPd  L   F +L  +d+++ ++ Cr+Wrr++ +
  MMETSP1325-20131115|2118_1 280 AQLPDVMLTNAFGFL-GRDIIKSCAICRKWRRLCTT 314
                 68************9.99****9**********954 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 0.46
                 HHHHHHHTTS.-HHHHHHH---- CS
   PF12937.2   7 EiLlqIFsyL.ppsdLlrlalVC 28 
                 E+ l+ Fs+   +++Ll l+ V+
  MMETSP1325-20131115|2118_1 435 ELQLEAFSRFsAFNSLLPLTDVS 457
                 66677788774588999998887 PP

  == domain 3    score: -4.2 bits;  conditional E-value: 0.95
                 -HHHHHH CS
   PF12937.2  28 CrrWrrv 34 
                 +rrW+++
  MMETSP1325-20131115|2118_1 543 SRRWNAI 549
                 7***975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (741 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.03u 0.38s 00:00:01.41 Elapsed: 00:00:00.56
# Mc/sec: 3170.89
//
Query:       MMETSP1325-20131115|2120_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   18.2   4.5      0.064   13.0   0.3    2.7  2  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.2   0.00068       9.3       5      19 ..     190     204 ..     186     211 .. 0.75
   2 !   13.0   0.3   4.7e-06     0.064       4      28 ..     220     244 ..     217     244 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00068
                 EEE.E.E-.---EEEE CS
  PF00397.21   5 Weersddd.dGrvYYy 19 
                  ++++d + ++r+YY+
  MMETSP1325-20131115|2120_1 190 YQKHYD-EnTQRYYYI 204
                 566785.448*****8 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 4.7e-06
                 SEEE.E.E-.---EEEEETTT--EES CS
  PF00397.21   4 gWeersddd.dGrvYYyNheTgetqW 28 
                 +W e+  ++ ++r+Y ++ eTget W
  MMETSP1325-20131115|2120_1 220 EWMEVL-EEaSQRTYHVHSETGETKW 244
                 599999.5779*************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1849  (0.13524); expected 273.4 (0.02)
Passed bias filter:                      579  (0.0423493); expected 273.4 (0.02)
Passed Vit filter:                        98  (0.00716793); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.90u 0.41s 00:00:01.31 Elapsed: 00:00:00.60
# Mc/sec: 1345.95
//
Query:       MMETSP1325-20131115|2122_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-11   43.3   0.0    3.9e-11   42.7   0.0    1.3  1  PF12695.2 Alpha/beta hydrolase family
    0.00029   19.7   0.0    0.00067   18.5   0.0    1.7  1  PF12740.2 Chlorophyllase enzyme
     0.0013   17.4   0.1      0.002   16.8   0.1    1.5  1  PF07224.6 Chlorophyllase
     0.0015   18.3   0.1        1.5    8.5   0.0    2.2  2  PF12697.2 Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.024   12.8   0.2        3.6    5.7   0.0    2.1  2  PF03403.8 Platelet-activating factor acetylhydrolase, isoform II


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.0   1.4e-14   3.9e-11       4     141 ..      72     229 ..      69     230 .. 0.74

  Alignments for each domain:
  == domain 1    score: 42.7 bits;  conditional E-value: 1.4e-14
   PF12695.2   4 lvhGaggdssa....yeplaealakrgfavvav.............dlpghgasegaaaakrvl........aadlldleriilvGhSlGGgvalelagrd.drvkglvllapfpd.gedlakltlpvllihGtrDgvvppeeaeklakalp.gdaelvviegasH 141
                 ++hG  + ++a    y++l e+ a+ gf+++a+             d+ +  +++                  ++ +    ++++GhS+G+++++  ag d   ++++ +l p+ +  +   k+++p+    G++D+++pp+e++  +++ +  ++ + +ie+a+H
  MMETSP1325-20131115|2122_1  72 FAHGKKAGGTAlkpsYRTLLEHTASFGFVIIAPrscpddycadfyqDQLYCITAA--------KegglsstgLESVDWSHSVGIFGHSMGAAATVISAGVDgYGISAAFVLHPYYNpPSIYEKIRVPTVHGTGSSDQICPPQEVKFGYEKNSfFPKVFAEIENATH 229
                 6788766555422228888889999999999997766655553333222222222........122222222355555669********************9999999999998554666789***************************99*99*********** PP

>> PF12740.2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   2.4e-07   0.00067      16      73 ..      66     141 ..      53     222 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 2.4e-07
   PF12740.2  16 typvvlflhGyl....llnsfYsqllehiashgyivvapq..............lytvtgpkatdeiksaaevlnW 73 
                 t+p++ f hG      +l  +Y +lleh as g++++ap+              ly++t +k+    ++  e ++W
  MMETSP1325-20131115|2122_1  66 TFPLLSFAHGKKaggtALKPSYRTLLEHTASFGFVIIAPRscpddycadfyqdqLYCITAAKEGGLSSTGLESVDW 141
                 589999999875322245667*******************566655555555555555555544444444444444 PP

>> PF07224.6  Chlorophyllase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   7.2e-07     0.002      45      82 ..      66     107 ..      30     217 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 7.2e-07
   PF07224.6  45 typvvlflhGtl....lsnkfyskllnhiashGfivvaPqly 82 
                 t+p++ f hG          +y +ll+h as+Gf+++aP+ +
  MMETSP1325-20131115|2122_1  66 TFPLLSFAHGKKaggtALKPSYRTLLEHTASFGFVIIAPRSC 107
                 799999999865111134568******************866 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.3   0.00082       2.2      44      92 ..     111     169 ..      72     182 .. 0.60
   2 !    8.5   0.0   0.00053       1.5     167     216 ..     179     230 ..     169     242 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00082
                 ..S--HHHHHHHHHHHHHH--...............--EEEE--------HHHHHH----.EE CS
   PF12697.2  44 ydpdtledlaadlaalldalgl..............rpvvlvGHSlGgavalaaaarrpdlvr 92 
                 y    ++d+ +d +  ++a+                + v ++GHS+G+a++   a  ++  ++
  MMETSP1325-20131115|2122_1 111 Y----CADFYQDQLYCITAAKEgglsstglesvdwsHSVGIFGHSMGAAATVISAGVDGYGIS 169
                 3....3444445555554444444566666777778899*********988766554555555 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00053
                 --HHHHTT--S-EEEEE-----HHHHHHHHHHHHHST..TEEEEE---SSSS CS
   PF12697.2 167 dlrealarldvPvlviageaDrvvppeearrlaealp..garvvvlpgagHl 216
                  +++ +++++vP+   +g+ D+++pp+e+++  e+ +   + + ++++a Hl
  MMETSP1325-20131115|2122_1 179 NPPSIYEKIRVPTVHGTGSSDQICPPQEVKFGYEKNSffPKVFAEIENATHL 230
                 5667899**********************99988764337789999999998 PP

>> PF03403.8  Platelet-activating factor acetylhydrolase, isoform II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0018       4.9     100     135 ..      65     104 ..      52     120 .. 0.80
   2 ?    5.7   0.0    0.0013       3.6     229     266 ..     140     179 ..     136     193 .. 0.61

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0018
   PF03403.8 100 ekyPllvFSHGL....gasRtlYSalcielAShGfvVaav 135
                   +Pll F+HG      a +  Y +l  + AS Gfv++a 
  MMETSP1325-20131115|2122_1  65 MTFPLLSFAHGKkaggTALKPSYRTLLEHTASFGFVIIAP 104
                 569*******972211345667***************986 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0013
   PF03403.8 229 dtsk.vaviGHSFGgA.tvikslsedteFrcaialDaWml 266
                 d s+ v + GHS G+A tvi +  +      a +l ++  
  MMETSP1325-20131115|2122_1 140 DWSHsVGIFGHSMGAAaTVISAGVDGYGISAAFVLHPYYN 179
                 5555599*******86266666555555556666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.43s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 1389.89
//
Query:       MMETSP1325-20131115|2124_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-20   71.2  10.5    1.8e-19   69.5   7.3    1.8  1  PF01699.19 Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   7.3   1.3e-23   1.8e-19       2     138 ..     123     307 ..     122     308 .. 0.97

  Alignments for each domain:
  == domain 1    score: 69.5 bits;  conditional E-value: 1.3e-23
  PF01699.19   2 lislladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkg.agdlalgsivGSalfnlllviglcvlisplgekr...................................iqkvlvfkvtldfsflllvllllllivll............sdgrltvweglvllllyilylvl 138
                 +i ++++++ + ++ +++v+g+ ++++++t++Algts+p++++s +aal++ ++d ++g+++GS+ +n++l++gl++ ++++++                                     +  + v   +l fs+++++++++l+i+ll            ++g +    +l+l++l+++y+ l
  MMETSP1325-20131115|2124_1 123 MIGVVTALIGDLASLLGCVIGMEDSFTAITFVALGTSLPDTFASKAAALGDdNADASIGNATGSNSVNVFLGLGLPWTLAAVYWNYiagassdfkkrygykengvgypgtatlstigydypNGAFIVPAGSLGFSVTVFTICAVLCIMLLiyrrlvikcelgGPGLTATRHALILVFLWVMYVTL 307
                 688999********************************************99******************************98779***********************************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       761  (0.0556612); expected 273.4 (0.02)
Passed bias filter:                      493  (0.0360591); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.58s 00:00:01.06 Elapsed: 00:00:00.70
# Mc/sec: 1157.10
//
Query:       MMETSP1325-20131115|2125_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          1    9.6   3.8        0.2   11.9   0.4    1.6  2  PF12598.3 T-box transcription factor


Domain annotation for each model (and alignments):
>> PF12598.3  T-box transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.4   1.5e-05       0.2      29      65 ..       2      38 ..       1      66 [. 0.83
   2 ?   -3.3   0.1      0.82   1.1e+04      26      35 ..      78      87 ..      73      90 .. 0.50

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.5e-05
   PF12598.3 29 feqpsSPlksasgplnlkrlieseedsDvesrddkee 65
                f+qpsS ++sa++p+     +es  dsD  + d+  +
  MMETSP1325-20131115|2125_1  2 FDQPSSHAASAPAPAPAPAPVESYLDSDSGDWDEDDP 38
                99***************************66666544 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 0.82
   PF12598.3 26 gkcfeqpsSP 35
                ++  + +sSP
  MMETSP1325-20131115|2125_1 78 ARSPATTSSP 87
                4433444455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.46s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 845.03
//
Query:       MMETSP1325-20131115|2123_1  [L=518]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.2e-49  165.9 133.6    7.2e-49  165.9  92.6    2.2  2  PF13868.1 Tumour suppressor, Mitostatin


Domain annotation for each model (and alignments):
>> PF13868.1  Tumour suppressor, Mitostatin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -14.7  22.2         1   1.4e+04     220     320 ..      53     153 ..      47     157 .. 0.41
   2 !  165.9  92.6   5.3e-53   7.2e-49       1     350 []     153     502 ..     153     502 .. 0.99

  Alignments for each domain:
  == domain 1    score: -14.7 bits;  conditional E-value: 1
   PF13868.1 220 kekeeaekkrrlkqelkrareeqleekeerlqeereeeeeerermlekqaeeeeleqenaekrrkkreehrreleqqieekeekreeereeeleegeklke 320
                 +++++ ++k+++++ lk++ ++  ++    +qe     ++++e + + qaee+  ++ ++ +  ++ +e  ++  + +    e+r++ere+++++ +++ e
  MMETSP1325-20131115|2123_1  53 QMMAARREKEEQMNALKDYSAQNTKLGFAAKQEIDITSRRRKEHLSRVQAEERMHAMIQESELAARSQERINDQNKKLAGELERRKAERERKERDIQRICE 153
                 33344444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444333 PP

  == domain 2    score: 165.9 bits;  conditional E-value: 5.3e-53
   PF13868.1   1 eqseelrelneklkaAkvnkerdaqieekkrikeeekeeerrldemmeeerlkalaeeeerekkrkeerregraeLeeQieerekrrqeeeeeklqEreqmdeiierieeEdeaeaqekrekqkklreeiaefneerkelkeeekerereeeekileyqrekaereeereeerkerkeekerivarLraqqeeaedekeeldeLrakllqeeyerkeRqkekeeaekkrrlkqelkrareeqleekeerlqeereeeeeerermlekqaeeeeleqenaekrrkkreehrreleqqieekeekreeereeeleegeklkeeeaerqarieeeRqrlLkelaeallgylpk 350
                 e+seelrel++ lk A++nker+aq eek+ +++  +e++++++++me +rl+  ++e e++++r++   +++a L++Qi  rek   e++ee++++++++d+i+++ie+Ed+++ + ++++++++r+ i+++ ++r++  +e+ e e ee ++i e ++++a+ree  ++  +e++e +++++a+L ++ ++   e+ el  Lr +l++ee e+ + q+ek++  kk++ k+e++ra++ +l++k++++++e++ee++  + m+ek+a +ee+e++ +  r  +re++++e+e+q  ++ +++e e++ el+  e++ke+e +r+a++ e+R+rlL+e++++l g+lpk
  MMETSP1325-20131115|2123_1 153 EESEELRELERRLKVAYMNKERAAQHEEKQVLARMTREADQAIEDQMEVDRLRLSQAEHEKQMARRNVGLAQKAHLQQQILVREKFLIEAQEEAARDKQMVDAIVQKIEQEDRRDLEIRERRKEETRKLIKDYERQRARELQEKMESEAEEQRQIREHMQNMAAREEGIQKALAEKEELQAEMFAKLVEDKARVTAEENELQMLRDMLWEEEMEASRAQAEKDRLIKKEKSKEEMARANQTMLAAKAKQREMEAAEEAKLVNLMMEKFANDEEQERQAELARVTRREQYKKEIEEQKSQRLHMYEVEKANELAGVEEEKEAETYRKAVVAEARRRLLEEHSKRLSGFLPK 502
                 79***************************************************************************************************************************************99999999999999999***************************************************************************************************************************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2841  (0.207797); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                       101  (0.00738736); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.12u 0.48s 00:00:02.60 Elapsed: 00:00:01.09
# Mc/sec: 1138.82
//
Query:       MMETSP1325-20131115|2127_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-10   40.2   0.0      5e-10   39.6   0.0    1.3  1  PF08033.7  Sec23/Sec24 beta-sandwich domain
    1.9e-09   37.1   0.0    8.1e-06   25.2   0.0    2.6  2  PF04811.10 Sec23/Sec24 trunk domain


Domain annotation for each model (and alignments):
>> PF08033.7  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.0   7.4e-14     5e-10       3      84 ..     222     292 ..     220     293 .] 0.92

  Alignments for each domain:
  == domain 1    score: 39.6 bits;  conditional E-value: 7.4e-14
                 -EEEEEEE-TTEEEEEEB---EEST-B-SS----TS-SEEEESCE-TT--EEEEEEESS-TTS-SEEEEEEEEEEE-----E CS
   PF08033.7   3 natlevrtSkelkvsgliGncvslsnvsekeiGeggtsewklcsldpdstlavyfdideklqsgkqayiQfatlYthssger 84 
                 + + +vr+S +l++ +++G+ v+++ v       g+   +++++++p ++l +++++d+ l++++++y+Q+atlY++ +g+r
  MMETSP1325-20131115|2127_1 222 ETVTKVRCSAGLRCASYHGPGVQRT-V-------GE---LEIAAMHPFTNLLCMLKHDNALKNDERVYVQAATLYSSLDGRR 292
                 67899*******************9.3.......55...599****************99*******************998 PP

>> PF04811.10  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   1.2e-09   8.1e-06     117     202 ..      38     131 ..       6     146 .. 0.77
   2 !    9.2   0.0   9.3e-05      0.63     200     224 ..     163     187 ..     161     204 .. 0.89

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 1.2e-09
                 ----HHHHHHHHHT..TS-EEEEEEE-S------.--S-SSTTS-CCCHHTT.-TTHHCHC...........HHHHHHHHHHCCCT-EEEEEEE-SC CS
  PF04811.10 117 algpalkaavellkavetggkiivfagslptvgaggklksredeslldidkekaklvkkad...........kfYkkLakecvkqgisvDlFlfsld 202
                 +  +al aa++ l+   +gg++ +++ + p +g+ g l+ re+++ ++ ++e++ + + ++           ++Y+k++++c+  +i vD+++++ +
  MMETSP1325-20131115|2127_1  38 CSIAALAAAADGLS--AVGGRVQLVSAGAPLIGI-GRLRPRERTTDYGGEREAELYRPLSTqakgkeerevaEWYTKFGDDCALRQIGVDVYVAPIQ 131
                 77899******999..678***************.*********888888886665542221111122222269******************98764 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 9.3e-05
                 -SC---CTTCHHHHHCC---EEEET CS
  PF04811.10 200 sldyvdlaelkqlaeltgGqvvlyd 224
                 ++++ d+a+l+ ++++tgG++++ d
  MMETSP1325-20131115|2127_1 163 PNAWLDMATLGLIPKVTGGKTIMLD 187
                 67899***************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1432.92
//
Query:       MMETSP1325-20131115|2121_1  [L=570]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-08   32.4   2.3    8.8e-05   22.1   0.0    3.2  3  PF02146.12 Sir2 family
    0.00018   21.1   0.0       0.24   11.0   0.0    2.4  2  PF00205.17 Thiamine pyrophosphate enzyme, central domain
  ------ inclusion threshold ------
      0.026   14.1   0.0      0.063   12.9   0.0    1.6  1  PF01483.15 Proprotein convertase P-domain


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.2    0.0032        14       1      15 [.     225     239 ..     225     249 .. 0.86
   2 !   22.1   0.0   1.9e-08   8.8e-05      58     105 ..     262     311 ..     254     319 .. 0.88
   3 ?    3.4   0.0     0.011        49     155     178 ..     329     352 ..     317     354 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0032
                 -----TT-------. CS
  PF02146.12   1 GAGiStesGipdfRs 15 
                 GAG+St++G+ d+  
  MMETSP1325-20131115|2121_1 225 GAGLSTSAGVSDYAT 239
                 9************74 PP

  == domain 2    score: 22.1 bits;  conditional E-value: 1.9e-08
                 T..S---HHHHHHHHHHH---EEEEEE--SS-HHHH----..SEEE---- CS
  PF02146.12  58 kaeakpnaaHkflkklekkgkllrliTQNidnLekkaGsk..kvvelHGs 105
                 +  a p+  H++++ l +kg++ r i QN d+L +kaG+    + e+HG 
  MMETSP1325-20131115|2121_1 262 PFAARPSLGHHVIAGLARKGHVWRFIQQNHDGLPQKAGMPqhLMNEIHGG 311
                 44789*********************************98767889**96 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHH-SEEEE----S- CS
  PF02146.12 155 eklkkllekveeadlllviGtSlk 178
                 + + +ll+  ++adl++++GtSl+
  MMETSP1325-20131115|2121_1 329 DLFADLLACEQQADLVVAVGTSLS 352
                 66777777889***********95 PP

>> PF00205.17  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   5.2e-05      0.24       2      28 ..     208     234 ..     207     244 .. 0.84
   2 !    7.7   0.0   0.00055       2.5      62      95 ..     322     358 ..     296     418 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.2e-05
                 HHHHHHHHH-SSEEEEE-CHHCHTTGH CS
  PF00205.17   2 deaaellkaakrPvilvGggvrrseak 28 
                 + +ael +aak+Pvi+ G+g ++s + 
  MMETSP1325-20131115|2121_1 208 KMLAELFRAAKKPVIYGGAGLSTSAGV 234
                 6689*****************988654 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.00055
                 B-SSCSCHHHHHHH...HH-SEEEEES--SSTTTT-- CS
  PF00205.17  62 ylgllgspaaneai...eeaDlvlvlGarlsdvrttg 95 
                 + g+l+s+   +++   ++aDlv+++G+ ls ++   
  MMETSP1325-20131115|2121_1 322 MSGSLRSDLFADLLaceQQADLVVAVGTSLSGMNADR 358
                 5555544433333333478***********9988754 PP

>> PF01483.15  Proprotein convertase P-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.4e-05     0.063      54      83 ..     503     531 ..     473     533 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.4e-05
                 TT--------EEEEEEE.S-----EEEEEE CS
  PF01483.15  54 kfwgesaqGtWtLevtdvknnrqtgklksw 83 
                  ++g +a+G W+L++t  ++ +++g++k++
  MMETSP1325-20131115|2121_1 503 TVLGRNADGHWRLRITH-RQVSNQGTVKEF 531
                 5789*************.9*******9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (570 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.66
# Mc/sec: 2069.58
//
Query:       MMETSP1325-20131115|2130_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   14.4   0.6      0.033   13.8   0.4    1.3  1  PF10496.4  SNARE-complex protein Syntaxin-18 N-terminus
      0.022   14.9   1.9      0.033   14.3   0.8    1.6  1  PF03234.9  Cdc37 N terminal kinase binding
      0.048   12.4   1.7       0.54    8.9   0.1    2.0  2  PF02005.11 N2,N2-dimethylguanosine tRNA methyltransferase
      0.061   13.1   0.1       0.08   12.7   0.1    1.2  1  PF07912.8  ERp29, N-terminal domain
      0.068   12.7   0.0       0.12   11.9   0.0    1.4  1  PF12828.2  PX-associated
       0.16   11.5   1.8        9.4    5.7   0.1    2.2  2  PF14136.1  Domain of unknown function (DUF4303)


Domain annotation for each model (and alignments):
>> PF10496.4  SNARE-complex protein Syntaxin-18 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.4   1.5e-05     0.033       7      77 ..      33     104 ..      31     111 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.5e-05
   PF10496.4   7 FkasVktvaeaskasskqedksnseektkpkdeFlkeAyrilkhIteLkkfLkeirkaYlsltshlks.esk 77 
                 ++a++ +++e+ +as+k+++ s    + + k+++ ke  +++   + L   Lk+  ++Yl+++ ++k+ e k
  MMETSP1325-20131115|2130_1  33 LQALLHIIEEETSASGKRKRFSRNVIREDLKKPWGKEQEEVNCYAVTLDALLKDSASRYLKTYVKTKKnEKK 104
                 5788999999******8888888888889********************************87766664444 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.8   1.5e-05     0.033      92     164 ..      12      90 ..       4     103 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.5e-05
   PF03234.9  92 dkedkasveeeeeeqpkynemledLldqvkdevdekk......aaklieelkkhrkklkkeekelekkleelekeekkk 164
                 +  d++ + ++++e+  yn+ml++Ll+ +++e+ ++        ++++e+lkk   k ++e +  +  l+ l k ++++
  MMETSP1325-20131115|2130_1  12 EMVDTFDQLRHDKEKQFYNNMLQALLHIIEEETSASGkrkrfsRNVIREDLKKPWGKEQEEVNCYAVTLDALLKDSASR 90 
                 455777788999*****************88887766555666666667777777666666666667777777766665 PP

>> PF02005.11  N2,N2-dimethylguanosine tRNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1     0.011        25     279     317 ..       7      45 ..       3      71 .. 0.73
   2 ?    8.9   0.1   0.00024      0.54     196     230 ..      71     105 ..      66     114 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.011
                 --B-HHHHHHHHHHHHT.S--TTHHHHHHHHHHHHHS.- CS
  PF02005.11 279 plkdkefveevleeaekekeeelkkrvlklLklikeEll 317
                  l  +e+v++  +  ++++++ +++ +++lL++i+eE++
  MMETSP1325-20131115|2130_1   7 RLSAAEMVDTFDQLRHDKEKQFYNNMLQALLHIIEEETS 45 
                 5667778887777777755666699999********974 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00024
                 HHHHCCT---EEEEEEEETTEEEEEEE-------- CS
  PF02005.11 196 reaakYekavepllslskdfYvrvfvkvktgaakv 230
                 +e ++Y  +++ ll  s+  Y++ +vk+k++++k 
  MMETSP1325-20131115|2130_1  71 EEVNCYAVTLDALLKDSASRYLKTYVKTKKNEKKE 105
                 6789*************************998875 PP

>> PF07912.8  ERp29, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   3.5e-05      0.08      19      90 ..      51     120 ..      39     129 .] 0.79

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.5e-05
                 TTSSEEEEEE--SS----HHHHHHHHHHHHHHH-SSEEEEEE--B-----CTS----TT---CCC-SEEEEE CS
   PF07912.8  19 ekfkyslvkfdtayPyGekheaftalakeaskateellvaevGikdyGekenkelgerykvdkesyPviflf 90 
                 ++f   +++ d + P+G+ +e+ + +a    +  ++   a   +k y + + +e  ery++ +e  P++f +
  MMETSP1325-20131115|2130_1  51 KRFSRNVIREDLKKPWGKEQEEVNCYAVTLDALLKD--SASRYLKTYVKTKKNEKKERYQIVEEYRPSLFQL 120
                 5777789********************555444444..478889********************99998754 PP

>> PF12828.2  PX-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.4e-05      0.12      72     115 ..      12      54 ..       7      65 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 5.4e-05
   PF12828.2  72 efvltfPfldseaqeeFWqdkvqvflekfaeknlSesedreelt 115
                 e+v tf  l ++++++F+++ +q +l+ + e++ S s  r++ +
  MMETSP1325-20131115|2130_1  12 EMVDTFDQLRHDKEKQFYNNMLQALLHII-EEETSASGKRKRFS 54 
                 67889999999*************88655.56678887777654 PP

>> PF14136.1  Domain of unknown function (DUF4303)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1    0.0044        10      96     129 ..      19      53 ..       5      64 .. 0.80
   2 ?    5.7   0.1    0.0041       9.4      78     114 ..      87     127 ..      66     128 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0044
   PF14136.1  96 d.feefreklleamvaaLreldeeglfgsgeredi 129
                 +  ++++++ ++ m++aL  + ee++  sg+r+++
  MMETSP1325-20131115|2130_1  19 QlRHDKEKQFYNNMLQALLHIIEEETSASGKRKRF 53 
                 3567889999****************999988776 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0041
   PF14136.1  78 einkllaerseelqneaed....feefreklleamvaaLre 114
                 ++++ l+++  + +ne ++     ee+r +l+++mv+ L+e
  MMETSP1325-20131115|2130_1  87 SASRYLKTYVKTKKNEKKEryqiVEEYRPSLFQLMVEELEE 127
                 566777777888888877788899************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1282  (0.0937683); expected 273.4 (0.02)
Passed bias filter:                      756  (0.0552955); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.42s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 606.14
//
Query:       MMETSP1325-20131115|2131_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   14.1   0.0      0.048   13.5   0.0    1.2  1  PF04586.12 Caudovirus prohead protease


Domain annotation for each model (and alignments):
>> PF04586.12  Caudovirus prohead protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.5e-06     0.048      36     100 ..       8      69 ..       2      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.5e-06
  PF04586.12  36 iapgafenalaekkdvrllfnHdtseplGrtksgteleeDekGLkveldlpdtpkardllelvkr 100
                  +++a+e+  +e   v +l+nH++s+p+ + ks  +l+e +   k ++d + ++ a++++ +v++
  MMETSP1325-20131115|2131_1   8 SENRAIEEYESE---VAALVNHRKSMPIQKAKSLPKLYEHASRIKPRFDEQMKTIAKNTITKVEN 69 
                 556677777555...*****************766**************9999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 788.03
//
Query:       MMETSP1325-20131115|2132_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-14   54.4   1.4    1.5e-14   54.3   1.0    1.1  1  PF09055.6  Nickel-containing superoxide dismutase
  ------ inclusion threshold ------
      0.013   15.2   0.1      0.019   14.7   0.1    1.3  1  PF00621.15 RhoGEF domain


Domain annotation for each model (and alignments):
>> PF09055.6  Nickel-containing superoxide dismutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   1.0   2.2e-18   1.5e-14      57     127 ..      32     106 ..      13     107 .] 0.95

  Alignments for each domain:
  == domain 1    score: 54.3 bits;  conditional E-value: 2.2e-18
   PF09055.6  57 ekeehaekvkeeilvlWtdYfkaqrle........kypelhelvhkvmkaaskakqevdkakaeeLlakveeiaeifwe 127
                 +k++ha+k+++ +    ++Y++aqr++        +y +++e +h+vm++a+k kq vd ++ae+L a++e++++++ +
  MMETSP1325-20131115|2132_1  32 TKDDHASKIIDLV----ANYMLAQRVKkelfesehDYHDALEFHHRVMQLAMKSKQTVDSEAAEALAAAIEDLSKMYIK 106
                 79***********....************************************************************76 PP

>> PF00621.15  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   2.8e-06     0.019       2      52 ..      54     103 ..      53     106 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.8e-06
                 HHHHHHHHHHHHHHHHHHHHHTHHHHHHC.TSS-HHHHHHHSTTHHHHHHH CS
  PF00621.15   2 ieElietErsYvrdLevlvevyieplkesksilseeeiksiFsnieeilkl 52 
                  +El+e+E +Y  +Le  ++v+   +k+ k+++ +e  + +   ie++ k+
  MMETSP1325-20131115|2132_1  54 KKELFESEHDYHDALEFHHRVMQLAMKS-KQTVDSEAAEALAAAIEDLSKM 103
                 58****************9999999999.99*9*****9999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       675  (0.049371); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 474.83
//
Query:       MMETSP1325-20131115|2128_1  [L=745]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-29  101.0  22.1    8.8e-10   37.9   0.0    8.9  9  PF00514.18 Armadillo/beta-catenin-like repeat
    4.2e-20   71.7  14.7    3.7e-06   27.0   0.2    4.8  4  PF13646.1  HEAT repeats
    1.3e-19   68.3  13.4    2.8e-05   23.7   0.0    7.7  8  PF02985.17 HEAT repeat
    1.2e-13   51.0  25.0    2.3e-05   24.6   0.3    7.3  7  PF13513.1  HEAT-like repeat
    4.4e-09   35.9   0.7      0.014   14.6   0.0    3.3  3  PF12348.3  CLASP N terminal
    8.7e-09   35.0   0.5      0.043   13.1   0.0    4.3  5  PF08713.6  DNA alkylation repair enzyme
    9.3e-09   34.0   4.3     0.0021   16.3   0.3    4.1  3  PF01602.15 Adaptin N terminal region
    9.9e-09   35.1   1.5    0.00082   19.1   0.0    4.3  4  PF12717.2  non-SMC mitotic condensation complex subunit 1
    3.1e-07   28.9   7.4    0.00023   19.4   0.1    4.2  4  PF10508.4  Proteasome non-ATPase 26S subunit
      2e-06   27.3   1.6      0.078   12.6   0.5    4.0  4  PF09759.4  Spinocerebellar ataxia type 10 protein domain
     0.0027   17.9   0.2       0.76   10.0   0.1    2.9  2  PF12755.2  Vacuolar 14 Fab1-binding region
  ------ inclusion threshold ------
      0.046   13.5   1.1        3.4    7.4   0.1    3.7  5  PF11698.3  V-ATPase subunit H
       0.28    9.5   1.4        1.2    7.4   0.1    2.1  2  PF05918.6  Apoptosis inhibitory protein 5 (API5)
       0.28   10.7   4.0         13    5.3   0.0    4.0  4  PF11841.3  Domain of unknown function (DUF3361)
        4.2    7.9  22.0         29    5.4   0.1    7.2  7  PF03130.11 PBS lyase HEAT-like repeat


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.3   9.1e-07   0.00083       2      40 ..      31      69 ..      30      70 .. 0.96
   2 ?   -0.5   0.0       1.2   1.1e+03       3      20 ..      74      91 ..      72     104 .. 0.76
   3 !   37.9   0.0   9.7e-13   8.8e-10       1      40 [.     114     153 ..     114     154 .. 0.96
   4 !   13.6   0.2   4.5e-05     0.041       2      40 ..     157     195 ..     156     196 .. 0.93
   5 !   25.2   0.3   9.7e-09   8.8e-06       1      40 [.     198     237 ..     198     238 .. 0.96
   6 !    7.2   0.0    0.0047       4.2       4      40 ..     243     279 ..     240     280 .. 0.89
   7 ?    2.7   0.0      0.12   1.1e+02       2      22 ..     283     303 ..     282     321 .. 0.87
   8 ?    2.9   0.0      0.11        96       7      39 ..     330     363 ..     327     365 .. 0.89
   9 ?   -0.6   0.0       1.3   1.2e+03       3      26 ..     369     392 ..     367     396 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 9.1e-07
                HHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18  2 penkqavieaGavppLvqLLksgdeevqeeAawALsNLa 40
                p+n++ + +aG+++ L  LL ++ +++q+ Aa AL+ La
  MMETSP1325-20131115|2128_1 31 PQNIEVMQNAGVMQLLRPLLLDNVPSIQQSAALALGRLA 69
                7899********************************998 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 1.2
                HHHHHHHHCHHHHHHHHH CS
  PF00514.18  3 enkqavieaGavppLvqL 20
                +  +av+   ++p+Lv  
  MMETSP1325-20131115|2128_1 74 DLAEAVVGNEILPQLVYS 91
                66789999999**99955 PP

  == domain 3    score: 37.9 bits;  conditional E-value: 9.7e-13
                 CHHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   1 spenkqavieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                 sp+  qav+++Ga+++Lv +L + d+ v+e+AawA++++a
  MMETSP1325-20131115|2128_1 114 SPDLAQAVVDSGALDALVPCLEDFDPTVKEAAAWAIGYIA 153
                 68899**********************************8 PP

  == domain 4    score: 13.6 bits;  conditional E-value: 4.5e-05
                 HHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   2 penkqavieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                  e  qav++aG v  Lv +++ +   +++ +a A+s ++
  MMETSP1325-20131115|2128_1 157 AELAQAVVDAGTVALLVLCIQEPEITLKRISASAMSDIC 195
                 5789*******************************9988 PP

  == domain 5    score: 25.2 bits;  conditional E-value: 9.7e-09
                 CHHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   1 spenkqavieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                 spe  qav++aGav  L  L+ ++d +++++ +++L  +a
  MMETSP1325-20131115|2128_1 198 SPELAQAVVDAGAVAYLAPLIVHPDAKLKRQVCCCLAQIA 237
                 6899********************************9998 PP

  == domain 6    score: 7.2 bits;  conditional E-value: 0.0047
                 HHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   4 nkqavieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                   + v+ea + p  +++Lk+ d  v+++Aa+++++ a
  MMETSP1325-20131115|2128_1 243 LAEVVVEAEIFPNILNCLKDSDAFVRKNAATCIREVA 279
                 6678999999999********************9877 PP

  == domain 7    score: 2.7 bits;  conditional E-value: 0.12
                 HHHHHHHHHCHHHHHHHHHHC CS
  PF00514.18   2 penkqavieaGavppLvqLLk 22 
                 pe  ++++++G+  +Lv++ +
  MMETSP1325-20131115|2128_1 283 PELAKLIVNSGGAAALVDFVS 303
                 89999************9876 PP

  == domain 8    score: 2.9 bits;  conditional E-value: 0.11
                 HHHHCHHHHHHHHHHC.-SSHHHHHHHHHHHHHH CS
  PF00514.18   7 avieaGavppLvqLLk.sgdeevqeeAawALsNL 39 
                 a+i + +v pL + L   + ++++ ++aw L+ +
  MMETSP1325-20131115|2128_1 330 AIIVSKGVAPLKEALVtEPEDHIKAASAWSLGQI 363
                 78889999999999999*************9976 PP

  == domain 9    score: -0.6 bits;  conditional E-value: 1.3
                 HHHHHHHHCHHHHHHHHHHC-SSH CS
  PF00514.18   3 enkqavieaGavppLvqLLksgde 26 
                 ++ +a+ e  ++++L++++ ++d 
  MMETSP1325-20131115|2128_1 369 DHARALAEGDVLRHLLACMVHQDS 392
                 667778888899999999998875 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.2   4.9e-07   0.00045      27      87 ..      37     107 ..      14     108 .. 0.80
   2 !   27.0   0.2   4.1e-09   3.7e-06       1      66 [.      85     162 ..      85     192 .. 0.72
   3 !   21.4   0.0   2.3e-07   0.00021       8      62 ..     218     284 ..     210     297 .. 0.77
   4 !   18.3   0.5     2e-06    0.0018       2      74 ..     338     424 ..     337     435 .. 0.79

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 4.9e-07
   PF13646.1  27 lgseealpaLlelLkdsdpevRraAaeaLgklg...........dpealpaLlklldddedavvreaaaeaL 87 
                 + ++ ++++L+ lL d  p+++++Aa aLg+l+            +e lp+L++ l +++++ v+ aaa  L
  MMETSP1325-20131115|2128_1  37 MQNAGVMQLLRPLLLDNVPSIQQSAALALGRLAnysedlaeavvGNEILPQLVYSL-SEQNRFVKKAAAFVL 107
                 456678999***********************65555555555558899*****88.6799******99877 PP

  == domain 2    score: 27.0 bits;  conditional E-value: 4.1e-09
   PF13646.1   1 leaLlaaLekdpdpevraaaieaLg.....qlgse.........ealpaLlelLkdsdpevRraAaeaLgklg..dpealpa 66 
                 l++L+  L ++ +  v+ aa+ +L          +          al+aL+ +L+d dp v++aAa+a+g ++  + e  +a
  MMETSP1325-20131115|2128_1  85 LPQLVYSL-SEQNRFVKKAAAFVLRavakhS---PdlaqavvdsGALDALVPCLEDFDPTVKEAAAWAIGYIAqhTAELAQA 162
                 68899999.9***************775440...333333444477**************************7332232333 PP

  == domain 3    score: 21.4 bits;  conditional E-value: 2.3e-07
   PF13646.1   8 LekdpdpevraaaieaLgqlgseea...........lpaLlelLkdsdpevRraAaeaLgklg..dpe 62 
                 +  +pd++++++++ +L+q++  ++            p +l +Lkdsd+ vR++Aa ++ +++  +pe
  MMETSP1325-20131115|2128_1 218 I-VHPDAKLKRQVCCCLAQIAKHSVdlaevvveaeiFPNILNCLKDSDAFVRKNAATCIREVAkhTPE 284
                 3.599*************998884444455555555***********************998633454 PP

  == domain 4    score: 18.3 bits;  conditional E-value: 2e-06
   PF13646.1   2 eaLlaaLekdpdpevraaaieaLgqlgseea...........lpaLlelL..kdsdpevRraAaeaLgkl.gdpealpaLlkllddd 74 
                 ++L +aL+++p+++++aa ++ Lgq+g  ++           l  Ll+++  +ds+++++ +  +aL ++ +    l+aL  ll++ 
  MMETSP1325-20131115|2128_1 338 APLKEALVTEPEDHIKAASAWSLGQIGRHTSdharalaegdvLRHLLACMvhQDSSEDLKTKSKRALKAIlAKCTHLQALQPLLREA 424
                 689*********************99988555556677755588888888999**************99755555566666666555 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   3.7e-05     0.034       1      30 [.      42      71 ..      42      72 .. 0.92
   2 !    6.9   0.0    0.0072       6.6       1      30 [.      84     113 ..      84     114 .. 0.95
   3 !   15.2   0.0   1.6e-05     0.015       2      30 ..     127     155 ..     126     156 .. 0.93
   4 ?   -0.7   0.0       2.1   1.9e+03       7      30 ..     174     197 ..     169     198 .. 0.76
   5 ?    5.2   0.1     0.026        23       5      30 ..     214     239 ..     211     240 .. 0.88
   6 !   23.7   0.0     3e-08   2.8e-05       1      30 [.     252     281 ..     252     282 .. 0.96
   7 ?    5.3   0.0     0.025        23      12      30 ..     348     366 ..     340     367 .. 0.86
   8 ?   -1.9   0.0         5   4.6e+03       5      31 .]     383     411 ..     379     411 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.7e-05
                HHHHHHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17  1 llPlllkllnDpspeVReaAaeaLgalaev 30
                ++ ll  ll D  p++ ++Aa aLg+la +
  MMETSP1325-20131115|2128_1 42 VMQLLRPLLLDNVPSIQQSAALALGRLANY 71
                588999*********************975 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0072
                 HHHHHHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17   1 llPlllkllnDpspeVReaAaeaLgalaev 30 
                 +lP l+  l+ ++  V++aAa+ L a+a++
  MMETSP1325-20131115|2128_1  84 ILPQLVYSLSEQNRFVKKAAAFVLRAVAKH 113
                 899*************************98 PP

  == domain 3    score: 15.2 bits;  conditional E-value: 1.6e-05
                 HHHHHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17   2 lPlllkllnDpspeVReaAaeaLgalaev 30 
                 l +l+ +l+D +p V+eaAa+a+g +a++
  MMETSP1325-20131115|2128_1 127 LDALVPCLEDFDPTVKEAAAWAIGYIAQH 155
                 678999*********************98 PP

  == domain 4    score: -0.7 bits;  conditional E-value: 2.1
                 HHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17   7 kllnDpspeVReaAaeaLgalaev 30 
                  +++ p+   ++ +a+a+++++++
  MMETSP1325-20131115|2128_1 174 LCIQEPEITLKRISASAMSDICKH 197
                 566667777788899*******98 PP

  == domain 5    score: 5.2 bits;  conditional E-value: 0.026
                 HHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17   5 llkllnDpspeVReaAaeaLgalaev 30 
                 l  l+ +p+++ +++++ +L+++a++
  MMETSP1325-20131115|2128_1 214 LAPLIVHPDAKLKRQVCCCLAQIAKH 239
                 6677889*****************98 PP

  == domain 6    score: 23.7 bits;  conditional E-value: 3e-08
                 HHHHHHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17   1 llPlllkllnDpspeVReaAaeaLgalaev 30 
                 ++P +l++l+D+++ VR++Aa+++ ++a++
  MMETSP1325-20131115|2128_1 252 IFPNILNCLKDSDAFVRKNAATCIREVAKH 281
                 78*************************998 PP

  == domain 7    score: 5.3 bits;  conditional E-value: 0.025
                 SSHHHHHHHHHHHHHHHHC CS
  PF02985.17  12 pspeVReaAaeaLgalaev 30 
                 p+ ++++a+a++Lg++ ++
  MMETSP1325-20131115|2128_1 348 PEDHIKAASAWSLGQIGRH 366
                 78999***********876 PP

  == domain 8    score: -1.9 bits;  conditional E-value: 5
                 HHHHHT..SSSHHHHHHHHHHHHHHHHCS CS
  PF02985.17   5 llklln..DpspeVReaAaeaLgalaevl 31 
                 ll ++   D+s++ +  + +aL a++ ++
  MMETSP1325-20131115|2128_1 383 LLACMVhqDSSEDLKTKSKRALKAILAKC 411
                 55444445888888888888999888766 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.3   0.00062      0.56      25      55 .]      38      68 ..      16      68 .. 0.78
   2 !   13.2   0.3    0.0001     0.095       1      53 [.      55     108 ..      55     110 .. 0.78
   3 !   24.6   0.3   2.6e-08   2.3e-05       3      55 .]      99     152 ..      97     152 .. 0.89
   4 ?    5.5   0.2     0.027        25       5      55 .]     185     236 ..     182     236 .. 0.81
   5 !    8.9   0.0    0.0023       2.1      27      53 ..     250     276 ..     237     278 .. 0.77
   6 !   14.5   0.0     4e-05     0.037       8      55 .]     314     363 ..     310     363 .. 0.88
   7 ?   -1.9   0.1       5.6   5.1e+03      26      33 ..     414     421 ..     379     434 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00062
   PF13513.1 25 avpellpaLlelLeddddeVReaAawALgrl 55
                ++  ++++L++lL d+ ++++++Aa+ALgrl
  MMETSP1325-20131115|2128_1 38 QNAGVMQLLRPLLLDNVPSIQQSAALALGRL 68
                66778999******9999***********97 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 0.0001
   PF13513.1   1 wrvRraAawaLGr.......laggeprllepavpellpaLlelLedddd.eVReaAawALg 53 
                 ++++++Aa+aLGr       la  e+  +++++p+l+  L+     + +  V++aAa  L 
  MMETSP1325-20131115|2128_1  55 PSIQQSAALALGRlanysedLA--EAVVGNEILPQLVYSLS-----EQNrFVKKAAAFVLR 108
                 6799*********666664433..55558889999999999.....999677999999886 PP

  == domain 3    score: 24.6 bits;  conditional E-value: 2.6e-08
   PF13513.1   3 vRraAawaLGrlaggeprllep.avpellpaLlelLeddddeVReaAawALgrl 55 
                 v+ aAa +L ++a   p+l++  +   +l+aL+++Led d+ V+eaAawA+g +
  MMETSP1325-20131115|2128_1  99 VKKAAAFVLRAVAKHSPDLAQAvVDSGALDALVPCLEDFDPTVKEAAAWAIGYI 152
                 8999*****66********8887888899999999999999**********965 PP

  == domain 4    score: 5.5 bits;  conditional E-value: 0.027
   PF13513.1   5 raAawaLGrlaggeprllep.avpellpaLlelLeddddeVReaAawALgrl 55 
                 r +a a + ++   p+l++  +   ++++L +l+ ++d++ +++++ +L+++
  MMETSP1325-20131115|2128_1 185 RISASAMSDICKHSPELAQAvVDAGAVAYLAPLIVHPDAKLKRQVCCCLAQI 236
                 666677755777778887775666799**********************997 PP

  == domain 5    score: 8.9 bits;  conditional E-value: 0.0023
   PF13513.1  27 pellpaLlelLeddddeVReaAawALg 53 
                  e+ p  l++L+d+d+ VR++Aa ++ 
  MMETSP1325-20131115|2128_1 250 AEIFPNILNCLKDSDAFVRKNAATCIR 276
                 466677777777777799****98875 PP

  == domain 6    score: 14.5 bits;  conditional E-value: 4e-05
   PF13513.1   8 awaLGr.laggeprllepavpellpaLlelL.eddddeVReaAawALgrl 55 
                 ++a+G  +a+ e   l+ +v + +++L e+L + ++d++++a+aw+Lg++
  MMETSP1325-20131115|2128_1 314 IMAVGYiAAFSETLALAIIVSKGVAPLKEALvTEPEDHIKAASAWSLGQI 363
                 6789999999999999***************555777***********98 PP

  == domain 7    score: -1.9 bits;  conditional E-value: 5.6
   PF13513.1  26 vpellpaL 33 
                 +++l p+L
  MMETSP1325-20131115|2128_1 414 LQALQPLL 421
                 33333333 PP

>> PF12348.3  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.5e-05     0.014      93     215 ..      40     163 ..      18     170 .. 0.77
   2 !   14.4   0.0   1.7e-05     0.016     171     217 ..     245     291 ..     223     298 .. 0.75
   3 ?    3.4   0.0     0.041        37      21      98 ..     407     480 ..     390     484 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.5e-05
   PF12348.3  93 eillptLlkllgdtkkiisqnanqaladl......lenasftsrlelqvlsvalqdKNvqpReysaiwLkillerhgsdkskleasglldliekslkkgleDanpeVReaaRatfweffkvwPsrAksl 215
                   ++++L  ll d+   i q+a+ al  l      l++a + +++ l  l   l++ N + ++ +a  L+ + +++++ ++++  sg    + ++l+ +leD +p+V+eaa  ++ +++++  + A+++
  MMETSP1325-20131115|2128_1  40 AGVMQLLRPLLLDNVPSIQQSAALALGRLanysedLAEAVVGNEI-LPQLVYSLSEQNRFVKKAAAFVLRAVAKHSPDLAQAVVDSG----ALDALVPCLEDFDPTVKEAAAWAIGYIAQHTAELAQAV 163
                 557888888888888888888888887662222222333347899.77788899999********************7777777777....55899999***********9877777777777776665 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.7e-05
   PF12348.3 171 asglldliekslkkgleDanpeVReaaRatfweffkvwPsrAkslls 217
                 +  +  +i + +  +l+D++  VR++a +++ e +k+ P+ Ak +++
  MMETSP1325-20131115|2128_1 245 EVVVEAEIFPNILNCLKDSDAFVRKNAATCIREVAKHTPELAKLIVN 291
                 3333356778999*****************************99885 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.041
   PF12348.3  21 wdaRekailklrsiikgnvpekavseflellkqlleailkalssLrttlsstachllkelaiqlkhqldpmveillpt 98 
                 + a+ ++++ l+ +++   p k ++    +lkq++  + + + ++r  + + ++++l+el  + + +l  ++ ++ + 
  MMETSP1325-20131115|2128_1 407 ILAKCTHLQALQPLLREA-PVKVQKY---VLKQFASILPHDVEARRAFVQNGGLQFLQELNETVGGKLTEFITQINNX 480
                 556677777777777766.4444443...56777799999****************************9999998665 PP

>> PF08713.6  DNA alkylation repair enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00018      0.16     163     196 ..      91     124 ..      81     155 .. 0.86
   2 ?   -1.3   0.0       1.2   1.1e+03     164     195 ..     134     165 ..     124     196 .. 0.78
   3 !   13.1   0.0   4.7e-05     0.043     152     191 ..     248     287 ..     193     298 .. 0.78
   4 ?    4.8   0.0     0.017        16     161     190 ..     342     371 ..     335     382 .. 0.88
   5 ?   -1.6   0.0       1.6   1.4e+03      52      70 ..     486     504 ..     442     538 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00018
   PF08713.6 163 lladkedfiqkAiGwaLrelsktdpdlveeFlek 196
                  l++++ f++kA + +Lr+++k+ pdl ++ +++
  MMETSP1325-20131115|2128_1  91 SLSEQNRFVKKAAAFVLRAVAKHSPDLAQAVVDS 124
                 578999*********************9987765 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 1.2
   PF08713.6 164 ladkedfiqkAiGwaLrelsktdpdlveeFle 195
                 l+d +  ++ A +wa+  ++++ ++l ++ ++
  MMETSP1325-20131115|2128_1 134 LEDFDPTVKEAAAWAIGYIAQHTAELAQAVVD 165
                 56667777888888888888887777766555 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 4.7e-05
   PF08713.6 152 dlellleiaeelladkedfiqkAiGwaLrelsktdpdlve 191
                   ++++ ++ + l+d++ f++k  + ++re++k+ p+l +
  MMETSP1325-20131115|2128_1 248 VEAEIFPNILNCLKDSDAFVRKNAATCIREVAKHTPELAK 287
                 4578999*****************************9876 PP

  == domain 4    score: 4.8 bits;  conditional E-value: 0.017
   PF08713.6 161 eelladkedfiqkAiGwaLrelsktdpdlv 190
                 e+l++++ed i+ A +w L +++++  d  
  MMETSP1325-20131115|2128_1 342 EALVTEPEDHIKAASAWSLGQIGRHTSDHA 371
                 78999*******************987765 PP

  == domain 5    score: -1.6 bits;  conditional E-value: 1.6
   PF08713.6  52 lqelaeeLwksperEerll 70 
                  + l+++L+k++ rE+r l
  MMETSP1325-20131115|2128_1 486 RRVLLATLLKKAAREDRRL 504
                 3346777777777777655 PP

>> PF01602.15  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.8   1.5e-05     0.014     114     219 ..      43     161 ..      39     249 .. 0.58
   2 !   16.3   0.3   2.3e-06    0.0021     111     147 ..     250     286 ..     172     292 .. 0.73
   3 ?    1.2   0.0     0.089        82     425     470 ..     349     401 ..     333     448 .. 0.63

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.5e-05
  PF01602.15 114 adaikkllkdrspyVrkkAalailklykkdpdlvrk...e.lieeikellsdkdpgVvlaAvalleei.kkndrlll.....kllpklvrrLcnll...telnpwlqvkiiklltrlar 219
                 ++ ++ ll d  p + ++Aala+ +l   ++dl +    +  +++++ +ls+++  V+ aA  +l  + k++++l+       +l  lv +L+++    +e   w++ +i +   +la+
  MMETSP1325-20131115|2128_1  43 MQLLRPLLLDNVPSIQQSAALALGRLANYSEDLAEAvvgNeILPQLVYSLSEQNRFVKKAAAFVLRAVaKHSPDLAQavvdsGALDALVPCLEDFDptvKEAAAWAIGYIAQHTAELAQ 161
                 66677888889999999999999999999888765411144566666667999999999999999999877777766644444444444444333233344445555555444444444 PP

  == domain 2    score: 16.3 bits;  conditional E-value: 2.3e-06
  PF01602.15 111 edladaikkllkdrspyVrkkAalailklykkdpdlv 147
                   +++ i ++lkd++++Vrk+Aa++i  + k +p+l 
  MMETSP1325-20131115|2128_1 250 AEIFPNILNCLKDSDAFVRKNAATCIREVAKHTPELA 286
                 5688999999999999999999999999999999985 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.089
  PF01602.15 425 spearaaaiWllGeygelven......te.sasdllrslaekfvlesekvkla 470
                 +  ++aa +W lG++g ++++      +   + +ll  +  + ++e +k+k+ 
  MMETSP1325-20131115|2128_1 349 EDHIKAASAWSLGQIGRHTSDharalaEGdVLRHLLACMVHQDSSEDLKTKSK 401
                 45599999999999999999977555422333444444444444455555544 PP

>> PF12717.2  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0086       7.9      65     114 ..      42      96 ..      32     121 .. 0.65
   2 !    7.2   0.0     0.004       3.6      25      99 ..      83     159 ..      81     179 .. 0.75
   3 !   19.1   0.0     9e-07   0.00082      11      98 ..     190     285 ..     183     304 .. 0.80
   4 ?    1.4   0.0      0.24   2.1e+02      29     106 ..     382     473 ..     375     502 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0086
   PF12717.2  65 flemlkll.aDedeeiralAelffsellkkknpnll.....ynllpelisvLnnct 114
                 ++++l+ l  D+ + i++ A l++ +l++  ++ l+       +lp+l+++L++ +
  MMETSP1325-20131115|2128_1  42 VMQLLRPLlLDNVPSIQQSAALALGRLANY-SEDLAeavvgNEILPQLVYSLSEQN 96 
                 556666555888888888888888888885.5455556666677888888888532 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.004
   PF12717.2  25 pyleklyacLkdedalvRktallvlshLiledmvK....vkgqlflemlkllaDedeeiralAelffsellkkknpnll 99 
                 ++l++l+ +L++++ +v+k a+ vl    ++        v    +  ++ +l+D d++++++A  ++  +++    + l
  MMETSP1325-20131115|2128_1  83 EILPQLVYSLSEQNRFVKKAAAFVLRAVAKHSPDLaqavVDSGALDALVPCLEDFDPTVKEAAAWAIGYIAQH--TAEL 159
                 5688999999999999999999999988776544311213344458889999**********99999888886..3444 PP

  == domain 3    score: 19.1 bits;  conditional E-value: 9e-07
   PF12717.2  11 algDLcvrypnlvdpy.....leklyacLkdedalvRktallvlshLiledm....vKvkgqlflemlkllaDedeeiralAelffsellkkknpnl 98 
                 a++D+c+  p+l         +  l+  + ++da+++++   +l++  ++ +    v v+ ++f ++l +l D+d  +r++A ++++e++k   p+l
  MMETSP1325-20131115|2128_1 190 AMSDICKHSPELAQAVvdagaVAYLAPLIVHPDAKLKRQVCCCLAQIAKHSVdlaeVVVEAEIFPNILNCLKDSDAFVRKNAATCIREVAKH-TPEL 285
                 78888888888888885555556677888899999999999999999877653344678999999999999999999999999999999997.5544 PP

  == domain 4    score: 1.4 bits;  conditional E-value: 0.24
   PF12717.2  29 klyacLkded...............alvRktallvlshLiledmvKvkgqlflemlkll.aDedee...iralAelffsellkkknpnllynllpel 106
                 +l+ac+ ++d                l + t l  l  L+ e  vKv++ ++ +++  l  D + +   +++    f++el+++     +   l e+
  MMETSP1325-20131115|2128_1 382 HLLACMVHQDssedlktkskralkaILAKCTHLQALQPLLREAPVKVQKYVLKQFASILpHDVEARrafVQNGGLQFLQELNET-----VGGKLTEF 473
                 555555555555566666666666566677778888899999999999999999988887443333233677777777777665.....33444444 PP

>> PF10508.4  Proteasome non-ATPase 26S subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.1    0.0011         1      79     155 ..      43     119 ..      32     135 .. 0.86
   2 ?    1.5   0.0     0.068        62      85     154 ..     133     202 ..     118     208 .. 0.88
   3 !   19.4   0.1   2.5e-07   0.00023      86     156 ..     218     288 ..     207     304 .. 0.94
   4 ?    1.7   0.1      0.06        55      86     156 ..     345     417 ..     323     444 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0011
   PF10508.4  79 qevlqeglkhatpavralvlkelkriveekegalellkeeellslildclrdedlsvaeeainlLkklskseaglde 155
                 +++l+  l  + p++++ ++  l+r+ + +e  +e +  +e+l ++++ l +++  v ++a  +L+ ++k+ + l++
  MMETSP1325-20131115|2128_1  43 MQLLRPLLLDNVPSIQQSAALALGRLANYSEDLAEAVVGNEILPQLVYSLSEQNRFVKKAAAFVLRAVAKHSPDLAQ 119
                 5666667777889999999999*************************************************998853 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.068
   PF10508.4  85 glkhatpavralvlkelkriveekegalellkeeellslildclrdedlsvaeeainlLkklskseagld 154
                  l+  +p+v++ ++  ++ i +++   ++ +  ++ + l++ c++++++        +++ + k+ ++l+
  MMETSP1325-20131115|2128_1 133 CLEDFDPTVKEAAAWAIGYIAQHTAELAQAVVDAGTVALLVLCIQEPEITLKRISASAMSDICKHSPELA 202
                 56677899******99*****999999999999999999***************9*********999986 PP

  == domain 3    score: 19.4 bits;  conditional E-value: 2.5e-07
   PF10508.4  86 lkhatpavralvlkelkriveekegalellkeeellslildclrdedlsvaeeainlLkklskseagldev 156
                 + h++ +++++v+  l+ i +++   +e++ e+e++  il+cl+d d+ v ++a   +++++k+ ++l+++
  MMETSP1325-20131115|2128_1 218 IVHPDAKLKRQVCCCLAQIAKHSVDLAEVVVEAEIFPNILNCLKDSDAFVRKNAATCIREVAKHTPELAKL 288
                 7799***************************************************************9987 PP

  == domain 4    score: 1.7 bits;  conditional E-value: 0.06
   PF10508.4  86 lkhatpavralvlkelkriveekegalellkeeellslildclrdedls..vaeeainlLkklskseagldev 156
                 ++ +++ ++a  + +l+ i ++++  +  l e ++l  +l c+ ++d+s    ++  ++Lk ++ +   l+++
  MMETSP1325-20131115|2128_1 345 VTEPEDHIKAASAWSLGQIGRHTSDHARALAEGDVLRHLLACMVHQDSSedLKTKSKRALKAILAKCTHLQAL 417
                 467899999999999****************************998865114566666777776666666655 PP

>> PF09759.4  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.86   7.9e+02      39      63 ..      92     116 ..      63     124 .. 0.71
   2 ?    5.0   0.0      0.02        18      23      67 ..     120     163 ..      99     169 .. 0.76
   3 !   12.6   0.5   8.5e-05     0.078       2      68 ..     225     289 ..     224     292 .. 0.91
   4 ?    5.2   0.0     0.016        15       9      59 ..     383     434 ..     379     438 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.86
   PF09759.4  39 iDdenPflkEwailairnLlennke 63 
                 + ++n f+k  a +++r + ++++ 
  MMETSP1325-20131115|2128_1  92 LSEQNRFVKKAAAFVLRAVAKHSPD 116
                 568999***********99988875 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.02
   PF09759.4  23 kvreldglaliLsntriDdenPflkEwailairnLlennke.nqel 67 
                 +v++ ++l ++  +  ++d +P +kE a +ai ++ ++++e +q +
  MMETSP1325-20131115|2128_1 120 AVVDSGALDALVPC--LEDFDPTVKEAAAWAIGYIAQHTAElAQAV 163
                 55666666665554..6899****************9998834544 PP

  == domain 3    score: 12.6 bits;  conditional E-value: 8.5e-05
   PF09759.4   2 lkrelvrlianltyknkevqdkvreldglaliLsntriDdenPflkEwailairnLlennkenqeli 68 
                 lkr++  ++a ++ ++++  + v+e +  ++iL++  + d+++f++  a  +ir + ++++e  +li
  MMETSP1325-20131115|2128_1 225 LKRQVCCCLAQIAKHSVDLAEVVVEAEIFPNILNC--LKDSDAFVRKNAATCIREVAKHTPELAKLI 289
                 7999999**************************98..5699**************999998866665 PP

  == domain 4    score: 5.2 bits;  conditional E-value: 0.016
   PF09759.4   9 lianltyknkevqdkvreldglaliLsnt.riDdenPflkEwailairnLle 59 
                 l+a ++++++    k ++  +l++iL ++ ++ +  P+l+E  + + +++l+
  MMETSP1325-20131115|2128_1 383 LLACMVHQDSSEDLKTKSKRALKAILAKCtHLQALQPLLREAPVKVQKYVLK 434
                 78999999999999999999******765268999******99988888876 PP

>> PF12755.2  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.041        37      24      89 ..      80     146 ..      45     149 .. 0.85
   2 !   10.0   0.1   0.00084      0.76       8      60 ..     234     284 ..     227     292 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.041
   PF12755.2  24 fleeivkpvlacfsDkdsrvRyyacEslyniakvakgevlkflne.ifdalcklvaDsdesvkngae 89 
                 + +ei++ ++ ++s++++ v+  a+  l  +ak + + +  ++ +   dal+  + D d++vk++a+
  MMETSP1325-20131115|2128_1  80 VGNEILPQLVYSLSEQNRFVKKAAAFVLRAVAKHSPDLAQAVVDSgALDALVPCLEDFDPTVKEAAA 146
                 45899******************************9999888764489***************9986 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00084
   PF12755.2   8 igLaavaialekkvkefleeivkpvlacfsDkdsrvRyyacEslyniakvakg 60 
                   +a  +++l + v     ei + +l+c++D+d+ vR  a+ ++  +ak + +
  MMETSP1325-20131115|2128_1 234 AQIAKHSVDLAEVVV--EAEIFPNILNCLKDSDAFVRKNAATCIREVAKHTPE 284
                 556666666666654..4689*******************9999999998765 PP

>> PF11698.3  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       3.5   3.2e+03      75     113 ..      30      68 ..      24      72 .. 0.85
   2 ?    1.0   0.0      0.37   3.4e+02      57     114 ..      96     153 ..      80     158 .. 0.79
   3 ?    3.3   0.0     0.074        68      62     115 ..     185     238 ..     168     242 .. 0.85
   4 ?    7.4   0.1    0.0038       3.4      47     113 ..     213     278 ..     206     282 .. 0.85
   5 ?   -1.0   0.0       1.6   1.4e+03      59     112 ..     351     406 ..     337     412 .. 0.70

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 3.5
   PF11698.3  75 ypegknileklkvkervmellshedeevrkeALlavqkl 113
                  p++ +++++ +v + +  ll ++ ++++++A la+ +l
  MMETSP1325-20131115|2128_1  30 RPQNIEVMQNAGVMQLLRPLLLDNVPSIQQSAALALGRL 68 
                 578889999999999999999999999999999998876 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.37
   PF11698.3  57 dkttlavacnDigefvrlypegknileklkvkervmellshedeevrkeALlavqkll 114
                 ++ + + a++ +  ++++ p+  + + + ++ + ++ +l++ d++v++ A  a+  + 
  MMETSP1325-20131115|2128_1  96 NRFVKKAAAFVLRAVAKHSPDLAQAVVDSGALDALVPCLEDFDPTVKEAAAWAIGYIA 153
                 445556677788899999999999999**********************999987765 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.074
   PF11698.3  62 avacnDigefvrlypegknileklkvkervmellshedeevrkeALlavqkllv 115
                  + ++ ++ ++++ pe  + + + ++ + +  l+ h+d++ +++   ++ ++  
  MMETSP1325-20131115|2128_1 185 RISASAMSDICKHSPELAQAVVDAGAVAYLAPLIVHPDAKLKRQVCCCLAQIAK 238
                 56777788999*********************************9999998865 PP

  == domain 4    score: 7.4 bits;  conditional E-value: 0.0038
   PF11698.3  47 kLielleksedkttlavacnDigefvrlypegknileklkvkervmellshedeevrkeALlavqkl 113
                  L+ l+ + + k+  +v+c  +++++++  +  +++ + ++  +++++l+++d+ vrk+A +++ ++
  MMETSP1325-20131115|2128_1 213 YLAPLIVHPDAKLKRQVCCC-LAQIAKHSVDLAEVVVEAEIFPNILNCLKDSDAFVRKNAATCIREV 278
                 56667777777777788775.99****************************************9876 PP

  == domain 5    score: -1.0 bits;  conditional E-value: 1.6
   PF11698.3  59 ttlavacnDigefvrlypegknileklkvkervmellshede..evrkeALlavqk 112
                 ++ a  +  +g++ r++++  + l + +v ++++ ++ h+d+  + ++++ +a+++
  MMETSP1325-20131115|2128_1 351 HIKAASAWSLGQIGRHTSDHARALAEGDVLRHLLACMVHQDSseDLKTKSKRALKA 406
                 44455666789999999999999999999999999999988522455555555554 PP

>> PF05918.6  Apoptosis inhibitory protein 5 (API5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0013       1.2      32     105 ..      93     172 ..      67     204 .. 0.75
   2 ?    0.5   0.1      0.16   1.5e+02      36      98 ..     223     290 ..     213     306 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0013
   PF05918.6  32 skttikekqlasqlipryfkffpslate.....aidaqldliddddvgvrvqairglPllCkdtadilskivdv.lvqll 105
                 s  +   k+ a+ ++    k+ p+la+      a+da + +++d d  v+  a   +  + + ta++   +vd   v ll
  MMETSP1325-20131115|2128_1  93 SEQNRFVKKAAAFVLRAVAKHSPDLAQAvvdsgALDALVPCLEDFDPTVKEAAAWAIGYIAQHTAELAQAVVDAgTVALL 172
                 5566667888888888999******97533334899999*********************************96322222 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.16
   PF05918.6  36 ikekqlasqlipryfkffpslateaidaq.....ldliddddvgvrvqairglPllCkdtadilskiv 98 
                  k k+  +  +++  k+  +la+  ++a+     l+++ d+d  vr+ a   +  + k t+++   iv
  MMETSP1325-20131115|2128_1 223 AKLKRQVCCCLAQIAKHSVDLAEVVVEAEifpniLNCLKDSDAFVRKNAATCIREVAKHTPELAKLIV 290
                 566666677778888999999987777753333379*************9999999999999876665 PP

>> PF11841.3  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.015        13      74     136 ..      55     117 ..      34     162 .. 0.81
   2 ?   -0.6   0.0      0.95   8.7e+02      77     111 ..     184     218 ..     173     238 .. 0.76
   3 ?    1.1   0.0      0.27   2.5e+02      83     129 ..     232     278 ..     222     292 .. 0.83
   4 ?    2.1   0.1      0.14   1.3e+02      92     139 ..     402     449 ..     384     499 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.015
   PF11841.3  74 ksvlqrslailesivlnSsklyqlveeeitlesllkllqesnqeiqtnaiallnalflkadde 136
                 +s++q++   l  +   S++l++ v  + +l +l+  l e+n+ +++ a  +l a+  +++d 
  MMETSP1325-20131115|2128_1  55 PSIQQSAALALGRLANYSEDLAEAVVGNEILPQLVYSLSEQNRFVKKAAAFVLRAVAKHSPDL 117
                 578888888888888889999888888888888888888888888888888888877766664 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.95
   PF11841.3  77 lqrslailesivlnSsklyqlveeeitlesllkll 111
                  + s + +  i++ S++l+q v     ++ l  l+
  MMETSP1325-20131115|2128_1 184 KRISASAMSDICKHSPELAQAVVDAGAVAYLAPLI 218
                 4567788899**********998877777666655 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.27
   PF11841.3  83 ilesivlnSsklyqlveeeitlesllkllqesnqeiqtnaiallnal 129
                  l +i + S +l++ v e  ++ ++l+ l++s+  +++na   +  +
  MMETSP1325-20131115|2128_1 232 CLAQIAKHSVDLAEVVVEAEIFPNILNCLKDSDAFVRKNAATCIREV 278
                 67889999*****99999999************99999998877655 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.14
   PF11841.3  92 sklyqlveeeitlesllkllqesnqeiqtnaiallnalflkaddekrk 139
                 ++l++ +++ + l+ l+ ll+e + ++q++ ++ + +++ +  +++r 
  MMETSP1325-20131115|2128_1 402 RALKAILAKCTHLQALQPLLREAPVKVQKYVLKQFASILPHDVEARRA 449
                 56778888889999****************999999998887777776 PP

>> PF03130.11  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.095        87       2      15 ..      58      82 ..      57      89 .. 0.70
   2 ?    1.0   0.1       0.8   7.2e+02       4      27 .]     102     136 ..      99     136 .. 0.71
   3 ?    5.1   0.4     0.038        35       1      15 [.     141     161 ..     141     171 .. 0.78
   4 ?   -1.1   0.0       3.8   3.5e+03       8      26 ..     328     345 ..     326     346 .. 0.75
   5 ?    5.4   0.1     0.032        29       3      15 ..     354     371 ..     352     388 .. 0.78
   6 ?   -1.2   0.1       4.1   3.8e+03       9      22 ..     408     421 ..     402     422 .. 0.84
   7 ?    2.2   0.0      0.32     3e+02       7      23 ..     568     585 ..     567     588 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.095
                SSSHHHHCCH--S...........H CS
  PF03130.11  2 RraAakaLgqlgd...........e 15
                + +Aa aLg+l              
  MMETSP1325-20131115|2128_1 58 QQSAALALGRLANysedlaeavvgN 82
                568********98777776555555 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.8
                 SHHHHCCH--S...........HTTHHHHHHHCCH CS
  PF03130.11   4 aAakaLgqlgd...........eeaipaLleaLqd 27 
                 aAa+ L ++               a++aL+ +L+d
  MMETSP1325-20131115|2128_1 102 AAAFVLRAVAKhspdlaqavvdSGALDALVPCLED 136
                 67777777776666666666667799999999987 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.038
                 TSSSHHHHCCH--S......H CS
  PF03130.11   1 vRraAakaLgqlgd......e 15 
                 v  aAa+a+g +        +
  MMETSP1325-20131115|2128_1 141 VKEAAAWAIGYIAQhtaelaQ 161
                 678********9986655543 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 3.8
                 HCCH--SHTTHHHHHHHCC CS
  PF03130.11   8 aLgqlgdeeaipaLleaLq 26 
                 aL+ + +   +++L+eaL 
  MMETSP1325-20131115|2128_1 328 ALAIIVS-KGVAPLKEALV 345
                 5666666.7899*****95 PP

  == domain 5    score: 5.4 bits;  conditional E-value: 0.032
                 SSHHHHCCH--S.....H CS
  PF03130.11   3 raAakaLgqlgd.....e 15 
                 +a a++Lgq+g       
  MMETSP1325-20131115|2128_1 354 AASAWSLGQIGRhtsdhA 371
                 799*******97666553 PP

  == domain 6    score: -1.2 bits;  conditional E-value: 4.1
                 CCH--SHTTHHHHH CS
  PF03130.11   9 LgqlgdeeaipaLl 22 
                 L+++++ +a+++Ll
  MMETSP1325-20131115|2128_1 408 LAKCTHLQALQPLL 421
                 88888999999997 PP

  == domain 7    score: 2.2 bits;  conditional E-value: 0.32
                 HHCCH--S.HTTHHHHHH CS
  PF03130.11   7 kaLgqlgd.eeaipaLle 23 
                 + L+q ++ + aip+L++
  MMETSP1325-20131115|2128_1 568 RELAQTTWcPTAIPPLCA 585
                 66999999********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (745 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.30u 0.36s 00:00:01.66 Elapsed: 00:00:00.76
# Mc/sec: 2349.06
//
Query:       MMETSP1325-20131115|2133_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-23   81.1   0.0    6.9e-23   81.0   0.0    1.1  1  PF13862.1 p21-C-terminal region-binding protein


Domain annotation for each model (and alignments):
>> PF13862.1  p21-C-terminal region-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   0.0     5e-27   6.9e-23      60     162 ..       2     106 ..       1     140 [. 0.78

  Alignments for each domain:
  == domain 1    score: 81.0 bits;  conditional E-value: 5e-27
   PF13862.1  60 sdvygflsvlnlkeykekeaikqlieyllekakksaeksvlkklkkllssskkkvglllseRliNmPlevvpplykmLleevewaqeke......kkykffhylvlskv 162
                 +d++++++v+nl  ++e +++ q+++yll+k+      +  + l+ ll+s ++ +g+l++eR++N+P+++vp+++++L ++++wa e+        +  f++++v+  +
  MMETSP1325-20131115|2133_1   2 TDLFAMITVVNLGMHRELPFVAQVRAYLLDKCP----ADKTARLRGLLESRDSACGILVNERMVNLPPQLVPQMHSSLCQDIAWARENAedeadeLEQAFDYIVVVAPF 106
                 589*****************************5....89999********************************************95555564333333355554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       430  (0.0314511); expected 273.4 (0.02)
Passed bias filter:                      411  (0.0300614); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.76
# Mc/sec: 529.72
//
Query:       MMETSP1325-20131115|2129_1  [L=509]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-40  138.1   0.0    3.8e-40  137.0   0.0    1.6  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    1.2e-07   31.8   0.0    2.2e-05   24.4   0.0    2.4  1  PF13401.1  AAA domain
    2.3e-06   27.2   0.1    1.1e-05   25.1   0.1    2.0  1  PF07728.9  AAA domain (dynein-related subfamily)
    1.3e-05   25.0   0.0    2.7e-05   24.0   0.0    1.4  1  PF07724.9  AAA domain (Cdc48 subfamily)
      3e-05   22.9   0.0    4.8e-05   22.2   0.0    1.3  1  PF05673.8  Protein of unknown function (DUF815)
    0.00084   19.6   0.1     0.0019   18.4   0.0    1.6  1  PF13191.1  AAA ATPase domain
    0.00091   18.2   0.0     0.0019   17.2   0.0    1.4  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
     0.0018   17.2   0.1       0.19   10.6   0.1    2.2  2  PF06745.8  KaiC
     0.0046   16.2   0.7       0.24   10.6   0.1    2.3  2  PF13481.1  AAA domain
     0.0058   16.6   0.0      0.012   15.6   0.0    1.5  1  PF00910.17 RNA helicase
     0.0089   15.3   0.0      0.016   14.5   0.0    1.3  1  PF01695.12 IstB-like ATP binding protein
  ------ inclusion threshold ------
      0.012   14.2   0.0      0.019   13.5   0.0    1.2  1  PF06068.8  TIP49 C-terminus
      0.016   14.9   0.0      0.027   14.2   0.0    1.4  1  PF13173.1  AAA domain
      0.016   14.5   0.0       0.13   11.6   0.0    2.0  2  PF00158.21 Sigma-54 interaction domain
      0.023   14.9   0.2       0.09   12.9   0.0    2.1  2  PF13238.1  AAA domain
      0.025   15.2   0.1      0.088   13.4   0.1    2.0  1  PF13207.1  AAA domain
      0.031   13.9   0.5      0.031   13.9   0.3    1.8  1  PF13245.1  Part of AAA domain
      0.035   13.5   0.3      0.097   12.1   0.1    1.8  2  PF13479.1  AAA domain
      0.048   12.3   0.0       0.11   11.2   0.0    1.5  1  PF00931.17 NB-ARC domain
      0.048   13.1   0.0       0.13   11.7   0.0    1.7  1  PF07726.6  ATPase family associated with various cellular activities (AAA)
       0.05   13.0   0.2       0.13   11.7   0.0    1.8  2  PF05729.7  NACHT domain
      0.051   12.5   0.0      0.086   11.8   0.0    1.3  1  PF06414.7  Zeta toxin
      0.063   12.3   0.1       0.16   11.0   0.0    1.7  2  PF02562.11 PhoH-like protein
      0.063   13.1   0.0       0.13   12.1   0.0    1.5  1  PF13521.1  AAA domain
      0.071   12.1   0.0       0.14   11.2   0.0    1.4  1  PF01078.16 Magnesium chelatase, subunit ChlI
       0.08   12.7   0.0       0.16   11.7   0.0    1.5  1  PF13671.1  AAA domain
        0.1   11.4   0.0       0.16   10.7   0.0    1.3  1  PF09848.4  Uncharacterized conserved protein (DUF2075)


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   0.0   7.5e-43   3.8e-40       1     132 []     229     362 ..     229     362 .. 0.95

  Alignments for each domain:
  == domain 1    score: 137.0 bits;  conditional E-value: 7.5e-43
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE--S CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 v+lyG pGtGKTllakava++++++fl++ gsel++ky+g+++k +relf+ a  ++ psi+fiDEida++++r   +++ ++e +r++ +Ll++ldg++++ ++v vi+atn++++ldpal+r gR+drkie++l
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQTSATFLRMVGSELIQKYLGDGPKLVRELFRVADDHS-PSIVFIDEIDAVGSKRydsQSGGTREIQRTMLELLNQLDGFDER-GDVKVIMATNNIESLDPALIRpGRIDRKIEFPL 362
                 79******************************************************9.****************9866668889999999***********7.66****************************985 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   4.3e-08   2.2e-05       7     122 ..     229     337 ..     223     344 .. 0.72

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 4.3e-08
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapastspkellqkllsalglpakgrltteellealqealrrrrtrlliiDEaqrL........s.......eealeelrslldd...etgvklvlv 122
                 ++++Ge+G+GKT+l++ +a+q                      ++ ++l+++ s+l ++  g  +  +l++ l +++++++  ++ iDE++ +        s        ++le+l  l      + +vk++++
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQ----------------------TSATFLRMVGSELIQKYLG--DGPKLVRELFRVADDHSPSIVFIDEIDAVgskrydsqSggtreiqRTMLELLNQLD-GfdeRGDVKVIMA 337
                 79******************8......................4666777777777777777..77788999999999999999999999998877666541555566655555553332.1243777777664 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.1   2.1e-08   1.1e-05       1     137 [.     228     350 ..     228     350 .. 0.79

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 2.1e-08
                 EEEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------..G-SEEEEESGGG---HHHHHHHHHHHSSEEE..----EE.E---.......-EEEEE-SS--.-TT-TTHHHHT CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrlllpeggelv.kaknddlleknfrviatanpldrslnelspalrs 137
                 +v+L G+pGtgK+ la+ +a  + ++++ + +++      l++++   +++ +lv   l r a   +++i+++DE++ + s+  +s      e ++++ e+ ++  ++++    + ++ vi+++n+ +    +l+pal++
  MMETSP1325-20131115|2129_1 228 GVILYGEPGTGKTLLAKAVANQTSATFLRMVGSE------LIQKYL--GDGPKLVRE-LFRVADdhSPSIVFIDEIDAVGSKRYDSQSGGTREIQRTMLELLNQLdGFDE----RGDVKVIMATNNIE----SLDPALIR 350
                 59***********************999999876......999999..344444443.33334346**********************9999988887776555504444....348********999....88888875 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   5.3e-08   2.7e-05       7     106 ..     230     323 ..     225     347 .. 0.84

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 5.3e-08
                 EEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--..-EEEETGGG----------------HHHHHHHH--- CS
   PF07724.9   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqilegg 106
                 +l g+ g+Gkt+laka+a+  ++    ++ r+  sel++    + l +  +  ++    a+++   iv++DEid + +k+  ++     ++qr +L +l + 
  MMETSP1325-20131115|2129_1 230 ILYGEPGTGKTLLAKAVANQTSA----TFLRMVGSELIQ----KYLGDGPKLVRELFRVADDHSpsIVFIDEIDAVGSKRYDSQSGGTREIQRTMLELLNQL 323
                 5668889*************996....9***********....88888888888888888887788************988888889999********9865 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   9.6e-08   4.8e-05      51     116 ..     224     294 ..     180     306 .. 0.84

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 9.6e-08
   PF05673.8  51 lpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkdlpkivellr...erperfilfvDDL 116
                 +p + v+L+G+ GtGK  l ka+ n+++++ Lr++  e+ ++ l d pk+v++l    + +   i+f+D +
  MMETSP1325-20131115|2129_1 224 KPPKGVILYGEPGTGKTLLAKAVANQTSATFLRMVgsELIQKYLGDGPKLVRELFrvaDDHSPSIVFIDEI 294
                 567789*****************************8889999********998652226677899999975 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   3.8e-06    0.0019      16      47 ..     218     250 ..     194     288 .. 0.68

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 3.8e-06
   PF13191.1  16 lrrvsegsp.lllvtGpsGiGKSsLlrelakpi 47 
                 ++++    p  ++++G++G+GK+ L++++a + 
  MMETSP1325-20131115|2129_1 218 YEEIGIKPPkGVILYGEPGTGKTLLAKAVANQT 250
                 44444455589*****************66544 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   3.7e-06    0.0019      52     111 ..     228     295 ..     220     301 .. 0.73

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 3.7e-06
   PF05496.7  52 hvllyGpPGlGkttlakiiakelgve.lkvtsgPvleka.gdlaalltnl......eekdvlfideih 111
                  v+lyG PG Gkt lak +a++  ++ l++  + +++k  gd   l+ +l      ++  ++fidei 
  MMETSP1325-20131115|2129_1 228 GVILYGEPGTGKTLLAKAVANQTSATfLRMVGSELIQKYlGDGPKLVRELfrvaddHSPSIVFIDEID 295
                 599*******************9987257777788887536655555554222222234699999996 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.1   0.00038      0.19      15      37 ..     222     244 ..     197     254 .. 0.84
   2 ?    4.5   0.0     0.027        14     100     149 ..     270     323 ..     245     325 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00038
   PF06745.8  15 GipegrvvlitGepGtGKtifal 37 
                 Gi   + v ++GepGtGKt++a+
  MMETSP1325-20131115|2129_1 222 GIKPPKGVILYGEPGTGKTLLAK 244
                 777778899************97 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.027
   PF06745.8 100 leelieklaeaikeikakrvviDsitgl....yeekeavaReilrqlvrvlkkl 149
                   +l+++l ++ ++   + v iD i+++    y +++  +Rei r++++ l++l
  MMETSP1325-20131115|2129_1 270 GPKLVRELFRVADDHSPSIVFIDEIDAVgskrYDSQSGGTREIQRTMLELLNQL 323
                 5689999999*****************999888899999********9999986 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.1   0.00047      0.24      34      54 ..     228     247 ..     211     255 .. 0.84
   2 ?    3.4   0.0     0.075        38     128     183 ..     272     334 ..     259     338 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00047
   PF13481.1  34 sltllaGapgtGKStlalqla 54 
                 + ++l+G+pgtGK+ la + a
  MMETSP1325-20131115|2129_1 228 G-VILYGEPGTGKTLLAKAVA 247
                 4.79************98877 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.075
   PF13481.1 128 adlerllaaieelegpdlvviDtlsrlvggdensnsd........vgaviaalerlakrtgaav 183
                   +++l + +++ + p++v iD ++++ +   +s+s+        + +++++l+ + +r ++ v
  MMETSP1325-20131115|2129_1 272 KLVRELFRVADD-HSPSIVFIDEIDAVGSKRYDSQSGgtreiqrtMLELLNQLDGFDERGDVKV 334
                 467899999999.89************9997777777555555544566666666666655555 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.4e-05     0.012       1      69 [.     229     289 ..     229     309 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 2.4e-05
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdeenps.d 69 
                 ++lyG++g+GK++lak +          ++++ ++ r + ++  ++Y g    ++ ++ +v d+ +ps  
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAV---------ANQTSATFLRMVGSELIQKYLGDGPKLVRELFRVADDHSPSiV 289
                 689**************3.........4556677778888888888888888888888888877666643 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.2e-05     0.016      48      71 ..     227     250 ..     218     259 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.2e-05
  PF01695.12  48 enlvllGpsGvGKthlAialgvea 71 
                 + ++l G +G+GKt lA a++ + 
  MMETSP1325-20131115|2129_1 227 KGVILYGEPGTGKTLLAKAVANQT 250
                 689**************9999875 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.8e-05     0.019      51      90 ..     227     264 ..     219     280 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.8e-05
   PF06068.8  51 ravLlaGppgtGktalaiaiskelgedvpfvalsgsevys 90 
                 ++v+l G+pgtGkt la a++++ +    f  ++gse+  
  MMETSP1325-20131115|2129_1 227 KGVILYGEPGTGKTLLAKAVANQTS--ATFLRMVGSELIQ 264
                 899******************9977..78*******9865 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.4e-05     0.027       3      74 ..     227     317 ..     225     362 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 5.4e-05
   PF13173.1   3 kilvitGpRrvGKttllkqlakellkeesilyinlddeelrklad.pe.llelfleklkekkkylflDEiqev...................p 74 
                 k ++++G  ++GKt l+k +a++      +l +   +   + l d p+ + elf+  +    +++f+DEi  v                    
  MMETSP1325-20131115|2129_1 227 KGVILYGEPGTGKTLLAKAVANQTS--ATFLRMVGSELIQKYLGDgPKlVRELFRVADDHSPSIVFIDEIDAVgskrydsqsggtreiqrtmL 317
                 56899***************98877..6666665555333333332433444444444448899******99977777777777755553333 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00025      0.13      23      47 ..     227     251 ..     216     263 .. 0.84
   2 ?    0.1   0.0      0.85   4.3e+02      95     143 ..     287     340 ..     277     347 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00025
                 S-EEEE-------HHHHHHHHHTST CS
  PF00158.21  23 ltvlitGesGtGKellAraiheask 47 
                   v++ Ge GtGK+llA+a+ ++++
  MMETSP1325-20131115|2129_1 227 KGVILYGEPGTGKTLLAKAVANQTS 251
                 5699***************988765 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.85
                 --EEEET----...-HHHHHHHHHHHH---BE------..EB-----EEEE-SS CS
  PF00158.21  95 GtLfLDeigel...plelQekLlrvlqegeverlGsek..eikvdvriiaatne 143
                 +++f+Dei  +    ++ Q+   r +q+  +e l + +    + dv++i+atn+
  MMETSP1325-20131115|2129_1 287 SIVFIDEIDAVgskRYDSQSGGTREIQRTMLELLNQLDgfDERGDVKVIMATNN 340
                 567888876662114556777777888777777776542256789999999984 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       6.3   3.2e+03      38      66 ..      88     109 ..      68     140 .. 0.53
   2 ?   12.9   0.0   0.00018      0.09       1      23 [.     229     264 ..     229     352 .. 0.74

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 6.3
   PF13238.1  38 evddkidtkeskeldedkldelldkleen 66 
                          +  + +e+k++e  dk+e+ 
  MMETSP1325-20131115|2129_1  88 N-------QQVFKPQEEKDKEERDKMEDL 109
                 2.......344444444444444444443 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 0.00018
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl.............g 23 
                 +++ G pG+GKt lak+ a+ +              
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQTsatflrmvgseliQ 264
                 7899**************998766666555543340 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   0.00017     0.088       2      28 ..     229     255 ..     229     371 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 0.00017
                 E--B--TT---HHHHHHHHHHSTEEEE CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvl 28 
                 ++++G pG+GK+ lak++a++     l
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQTSATFL 255
                 789****************98765444 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.3   6.1e-05     0.031      12      32 ..     228     247 ..     221     253 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 6.1e-05
   PF13245.1  12 llvvtGgPGtGKTttlaaiia 32 
                  +++ G PGtGKT +la+++a
  MMETSP1325-20131115|2129_1 228 GVILYGEPGTGKT-LLAKAVA 247
                 46779********.7777766 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       8.2   4.2e+03     103     117 ..      73      87 ..      70      95 .. 0.84
   2 ?   12.1   0.1   0.00019     0.097       6      23 ..     229     246 ..     226     257 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 8.2
   PF13479.1 103 dtlqgYgllaeefsr 117
                 + +++Y l+ eef+r
  MMETSP1325-20131115|2129_1  73 ERIKDYMLMEEEFIR 87 
                 4589*********98 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00019
   PF13479.1   6 vliYGkpGiGKTslaktl 23 
                 v++YG+pG+GKT lak +
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAV 246
                 789************987 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00021      0.11      21      44 ..     228     251 ..     216     259 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00021
                 EEEEE-------HHHHHHHTS-SS CS
  PF00931.17  21 vvglvGmgGvGKttlakqvykdes 44 
                  v l+G +G GKt lak+v ++ s
  MMETSP1325-20131115|2129_1 228 GVILYGEPGTGKTLLAKAVANQTS 251
                 588*****************9865 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00025      0.13       2      30 ..     229     257 ..     228     264 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00025
   PF07726.6   2 vllegvPGlaktllvkalakaldlefkri 30 
                 v+l g PG++ktll+ka+a++ +++f r+
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQTSATFLRM 257
                 7899********************99986 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00026      0.13       3      23 ..     229     249 ..     227     257 .. 0.90
   2 ?   -2.3   0.0       5.3   2.7e+03     100     115 ..     306     321 ..     260     333 .. 0.54

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00026
   PF05729.7   3 vilqGeaGsGKTtLlqklasa 23 
                 vil Ge+G GKT L++ +a++
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQ 249
                 89***************9987 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 5.3
   PF05729.7 100 lkekqpvrtlLselir 115
                   + +++++ + el++
  MMETSP1325-20131115|2129_1 306 SGGTREIQRTMLELLN 321
                 3344444444444444 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00017     0.086      16      48 ..     226     257 ..     219     290 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00017
   PF06414.7  16 pkavllgGqpGAGKtslaellleelaagnivri 48 
                 pk v+l G pG GKt la+++ +++ +  ++r 
  MMETSP1325-20131115|2129_1 226 PKGVILYGEPGTGKTLLAKAVANQT-SATFLRM 257
                 999*******************998.6666665 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00032      0.16      21      42 ..     228     249 ..     218     258 .. 0.85
   2 ?   -3.2   0.0       7.2   3.6e+03      80     114 ..     316     350 ..     309     354 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00032
  PF02562.11  21 ivfaiGpaGtGKTylavalave 42 
                  v++ G+ GtGKT+la a+a +
  MMETSP1325-20131115|2129_1 228 GVILYGEPGTGKTLLAKAVANQ 249
                 58899***********999976 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 7.2
  PF02562.11  80 lrplydaLkdllgaekvekllekgkievaplafmR 114
                 +  l ++L+ + ++  v+ ++ +++ie ++ a +R
  MMETSP1325-20131115|2129_1 316 MLELLNQLDGFDERGDVKVIMATNNIESLDPALIR 350
                 55667777777788889999999999999888888 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00025      0.13       2      39 ..     229     267 ..     228     283 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00025
   PF13521.1   2 ivitGgpstGKTtlleaLaargypvv.pEvarevleekl 39 
                 +++ G p+tGKT l++a+a++   ++ + v+ e++++ l
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQTSATFlRMVGSELIQKYL 267
                 7899***************98555443666666666555 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00027      0.14      25      43 ..     229     247 ..     219     257 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00027
  PF01078.16  25 lllvGppGsGKtmlakrlp 43 
                 ++l+G pG+GKt+lak+++
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVA 247
                 89*************9875 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00032      0.16       2      29 ..     229     256 ..     229     288 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00032
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrls 29 
                 v+l G pG+GK+ la+++++++ +++l+
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQTSATFLR 256
                 7899***************999877664 PP

>> PF09848.4  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00032      0.16       4      25 ..     229     250 ..     226     280 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00032
   PF09848.4   4 ilvtGvaGtGKtvvalnllael 25 
                 ++  G++GtGKt++a +++++ 
  MMETSP1325-20131115|2129_1 229 VILYGEPGTGKTLLAKAVANQT 250
                 6789***********9999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.98u 0.39s 00:00:01.37 Elapsed: 00:00:00.60
# Mc/sec: 2032.91
//
Query:       MMETSP1325-20131115|2126_1  [L=927]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-24   86.3   8.6    4.4e-23   81.9   4.3    2.9  2  PF00026.18 Eukaryotic aspartyl protease
  ------ inclusion threshold ------
       0.07   13.5   0.0         17    5.8   0.0    3.5  3  PF13650.1  Aspartyl protease


Domain annotation for each model (and alignments):
>> PF00026.18  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.9   4.3   6.4e-27   4.4e-23       3     298 ..     299     620 ..     297     633 .. 0.83
   2 !    2.4   0.0      0.01        68     295     313 ..     664     682 ..     659     683 .. 0.89

  Alignments for each domain:
  == domain 1    score: 81.9 bits;  conditional E-value: 6.4e-27
                 EEEEEE----EEEEEEBE------EEEBTTSSCCGHHTS--B-GGG-TT-EE---B..............--EE-----.EE-EEEEEEEE----EEEEEEEEEEEEE-HHHH............CCTS----B-E--GGG-S-B.---HHHHHHHC--CSSSEEEE---STT----EEE---BCCCEE-EEEEEEBC.-SSS-EEEBEEEE----......EEEEEEBEEEE-----SEEE-HHHHHHHHHHH--EETS.....SEEEETTGG-GS-EEEEETT...S-EEEEEGGGGEEEC--STTSEEEESEEETT-ST--SSEEE--TTGGGE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00026.18   3 fgeisiGtpeqkftvifDTGSsdlWVpskkctssackshstydpskSstykkngks..............fsisYGdgs.vsGflsqDtvklggltvkeqefgeatkepgstf............laakfdGilGlgfkeievgetatpvfdtllsqglidepvFsvylnsdaeggelvfGgvDeskykGsltyvpvt.kkgywqvelesvtvgdk......tfcssgcqailDtGTsllalpesivekiakavgaaese....geyvvdCsslsslpdiaftvg...gkkitvsaselvlkesesasaiCilglqeldvpeegelwiLGdvFlrsa 298
                 + +i +Gtp+q+ +vi+DTGS  +  p + c+++  ++   +dp+kSst ++ g s              fs sY +gs  + + + D+   gg   + q  +e +++ +  f             ++k dGi+Gl+ +++       +++ +++sq+   +++Fs+ + +   gg ++ Gg D+s  +G+++ vp   ++g+++v+l+ v+vg+k      ++ ++g  +i+D+GT+ ++lp+ ++ ++ ka +    +     +++++ +++ +lp ++f ++   gk+++v  +   + e++ +  + +  +      +eg+  +LG +F++  
  MMETSP1325-20131115|2126_1 299 YVHIYVGTPPQRVSVIVDTGSHHTAFPCEGCKNCGKHTDPYFDPKKSSTSQTVGCSqckaaahcvsrrceFSQSYTEGSsWKAVQVIDKLWPGGQVAQSQPAQEQNEKLAVDFmfgcqfsetglfRTQKADGIMGLSANSL-------TLVPQMKSQRKSGNQAFSLCFMKG--GGIMTIGGADPSIQQGEMVLVPTLkSSGWFTVHLDFVEVGGKkldvqdSVYNTGKGVIVDSGTTDTYLPKRMAGQFKKAWKDIVGKdygnTKMTFSDEQFAKLPVVSFAFKdvnGKRVKVDMHPSAYMEKSAK--QYVPRIYV----NEGQGAVLGANFMQVQ 620
                 6789******************************99999**************99889999999999999999******99999999***99999999888887777644444467777777777999********94444.......45669*************999875..5********************987588999***********999888888889999*****************9999987766666666799999************98872224555554444444333333..33334444....779999******9865 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.01
                 GGGEEEEEETTTTEEEEEE CS
                 xxxxxxxxxxxxxxxxxxx RF
  PF00026.18 295 lrsaytvfdldnnrvglAe 313
                 ++ + ++fd dn+rvg+A+
  MMETSP1325-20131115|2126_1 664 IQDYNVLFDQDNKRVGFAR 682
                 788999***********96 PP

>> PF13650.1  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       0.6   4.1e+03      12      48 ..      43      80 ..      39      88 .. 0.74
   2 ?    5.8   0.0    0.0025        17       8      35 ..     309     336 ..     300     352 .. 0.79
   3 ?    3.4   0.0     0.014        97      12      38 ..     520     546 ..     495     616 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.6
   PF13650.1 12 fllDTGa.sgtliseelaerlglkpeeskipvlvsgag 48
                +++D G+ +g++ see  +rlg++  +++  ++ +gag
  MMETSP1325-20131115|2126_1 43 VVVDHGSwQGLAYSEEQQARLGVNELGERSDGRHNGAG 80
                68999995689999999999*99887776666655554 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0025
   PF13650.1   8 kpvrfllDTGasgtliseelaerlglkp 35 
                 ++v++++DTG+++t+ + e  +  g ++
  MMETSP1325-20131115|2126_1 309 QRVSVIVDTGSHHTAFPCEGCKNCGKHT 336
                 6899**********98877777766655 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.014
   PF13650.1  12 fllDTGasgtliseelaerlglkpees 38 
                 +++D+G + t++++++a + +   ++ 
  MMETSP1325-20131115|2126_1 520 VIVDSGTTDTYLPKRMAGQFKKAWKDI 546
                 69**************98887766664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (927 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.29u 0.34s 00:00:01.63 Elapsed: 00:00:00.66
# Mc/sec: 3365.79
//
Query:       MMETSP1325-20131115|2135_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-15   56.8   2.1    1.5e-15   56.8   1.5    1.9  2  PF13851.1 Growth-arrest specific micro-tubule binding
  ------ inclusion threshold ------
       0.13   12.4   0.4       0.21   11.8   0.3    1.3  1  PF10578.4 Seminal vesicle protein repeat
       0.35    9.6   4.5       0.37    9.5   3.1    1.0  1  PF12037.3 Domain of unknown function (DUF3523)
       0.83    9.5   5.0       0.98    9.3   3.5    1.1  1  PF13094.1 CENP-A-nucleosome distal (CAD) centromere subunit


Domain annotation for each model (and alignments):
>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.3      0.11   3.6e+02     114     123 ..       9      18 ..       2      37 .. 0.41
   2 !   56.8   1.5   4.3e-19   1.5e-15       2      39 ..      39      76 ..      38      77 .] 0.97

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.11
   PF13851.1 114 qrfekverEr 123
                 +r++++e + 
  MMETSP1325-20131115|2135_1   9 ERLTQLEADL 18 
                 2222222221 PP

  == domain 2    score: 56.8 bits;  conditional E-value: 4.3e-19
   PF13851.1  2 eLikqHekafeeiKnYYnditknnLelIkslkeeiael 39
                +L+k+H+kaf ++K+YYndit++nL+lIk+lk+e++e+
  MMETSP1325-20131115|2135_1 39 DLMKNHDKAFGQMKSYYNDITNDNLKLIKDLKDEVKEM 76
                7***********************************99 PP

>> PF10578.4  Seminal vesicle protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   6.2e-05      0.21       4      12 .]      46      54 ..      46      54 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.2e-05
   PF10578.4  4 KSFGQvKSq 12
                K FGQ+KS+
  MMETSP1325-20131115|2135_1 46 KAFGQMKSY 54
                67******8 PP

>> PF12037.3  Domain of unknown function (DUF3523)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.1   0.00011      0.37     158     225 ..       8      75 ..       2      77 .] 0.90

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00011
   PF12037.3 158 ekkreqieeeaeLerenekakieaeaearikeereneDinlkqlkekakeeretvlesikttfslige 225
                 +++ +q e+  eL+r+     ie+ ++  i    +n+D    q+k   ++ ++  l+ ik   + ++e
  MMETSP1325-20131115|2135_1   8 KERLTQLEADLELRRKVHIHEIEERKNLHISDLMKNHDKAFGQMKSYYNDITNDNLKLIKDLKDEVKE 75 
                 5788999****************************************************988777665 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.5   0.00029      0.98      57     137 ..       4      76 ..       1      77 [] 0.83

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00029
   PF13094.1  57 lekdeekleeLeknakalererkeesknlhpvlqelesevleenalaekedlklseknleptldeellellkqlnkhlesl 137
                  e+++e+l +Le++ +  +++  +e ++ +++l+ ++  ++++ a  +        k+  +++ ++ l+l+k l++ ++ +
  MMETSP1325-20131115|2135_1   4 EERCKERLTQLEADLELRRKVHIHEIEE-RKNLHISDLMKNHDKAFGQM-------KSYYNDITNDNLKLIKDLKDEVKEM 76 
                 589*************************.******99999999555553.......4588888888888888888777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1022  (0.0747513); expected 273.4 (0.02)
Passed bias filter:                      682  (0.049883); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.44s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|2136_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0066   15.8  13.4     0.0095   15.3   9.3    1.2  1  PF10500.4  Nuclear RNA-splicing-associated protein
  ------ inclusion threshold ------
       0.25    9.3   4.3       0.33    8.9   3.0    1.1  1  PF03154.10 Atrophin-1 family


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   9.3   1.4e-06    0.0095      36     139 ..     144     249 ..     136     280 .. 0.59

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.4e-06
   PF10500.4  36 rkksksskesrkkrekkkkkrrers..ssssssssssssssssssskseekrkkrkkkkkkrekkkekkekkklkkkgkkkeaeerrvkeaapepsldlwqkeaga 139
                 r+ s++ kes+ k  k++    +    +s+  s +sss+s  +  +k+ee+ k + +  +++ek+ke+  + k k+kgk ke+     + a + ps+   ++++ a
  MMETSP1325-20131115|2136_1 144 RELSEAEKESIVKFRKQTYTTTSYYnsASKYPSLTSSSTSKTTYVKKKEEGIKIKSRADRESEKQKEEDDAAKEKEKGKGKEKGVTINTTASAVPSMAISKEDEAA 249
                 5556666666655555544443221212222233333333344457778888888889999999***999999999999999555444555555555544444332 PP

>> PF03154.10  Atrophin-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.0   4.8e-05      0.33     576     642 ..     181     251 ..     156     271 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 4.8e-05
  PF03154.10 576 assk..lakkreeave...kakreaeqkareererekekekerererereaeraakasssshesrlseaqls 642
                 ++sk    kk+ee ++   +a re+e+  +ee +  kekek + +e+    + +a a  s   s+  ea ++
  MMETSP1325-20131115|2136_1 181 STSKttYVKKKEEGIKiksRADRESEK-QKEEDDAAKEKEKGKGKEKGVTINTTASAVPSMAISKEDEAAIA 251
                 333311567888876431245566665.67777888888887777777777777777666555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1217  (0.089014); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.37s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 1470.71
//
Query:       MMETSP1325-20131115|2137_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-12   45.6   0.0    7.8e-12   44.8   0.0    1.3  1  PF00787.19 PX domain


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   5.7e-16   7.8e-12      12     110 ..     127     230 ..     119     233 .. 0.85

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 5.7e-16
                 EEE..CETSSEEEEEEEECS-.SCEEEEEEEHHHHHHHHHHHHHHTTTSTSTS--TTSSSHHC....GTTSHHHHHHHHHHHHHHHHHHHHSCHHHHSHHHHHHH CS
  PF00787.19  12 etk.gskkhsyylievelktg.akewtvkRrYsdFeeLhskLlrkfprlklPplPkkvlfgsv....rkkdeefiekrrkgLeeyLqrllnhpelrksevltsFL 110
                 + + g +k++++ ++v ++t  ++  ++++r+s F++Lh++ ++ + +++l +  +  + g v    ++kd +fie r+++L+ yL rll++    +++ l  FL
  MMETSP1325-20131115|2137_1 127 R-SiGVGKSAVIEYQVLTTTTyKRVIETWHRFSGFQKLHQRVRSAYTGSHLVSSFPDMPSGLVspltDQKDVKFIEARQRALNTYLDRLLHMAKAPSNPDLMLFL 230
                 2.259999************9999***********************6666555555555555667799*********************************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.68
# Mc/sec: 1113.60
//
Query:       MMETSP1325-20131115|2138_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-43  148.0   0.0    2.8e-43  147.8   0.0    1.0  1  PF00217.14 ATP:guanido phosphotransferase, C-terminal catalytic domain


Domain annotation for each model (and alignments):
>> PF00217.14  ATP:guanido phosphotransferase, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.8   0.0     2e-47   2.8e-43      60     180 ..      17     141 ..       5     143 .] 0.96

  Alignments for each domain:
  == domain 1    score: 147.8 bits;  conditional E-value: 2e-47
                 S-HHHHHHHHHTTSS---..-SHHHHCTTTTTTTTTT---EE-TTSSEEEEESSSSSEEEEEEE----HHHHHHHHHHHHHHHH..TTS-BS--S------SSGGG-----EEEEEEE-TTCGCS CS
  PF00217.14  60 lseeeeeqliedhllfkk..vdrllsaaglardwpegrgilvnedktflvwvNeeDHlriismqkggdlkevykrlsraldele..eklefafseklGyltscPtnlGTglrasvhiklpkLske 180
                 +++e+ ++l++ h++fk+   d++l++ag+a+dwp grg++ +ed+ f++w  eeD+lri++m kg+ l++v++rl++al  +e  +++efa+sek+Gy+tscP+nlGTg+rasvh+k+p+L+++
  MMETSP1325-20131115|2138_1  17 ITQEKYQELVDAHVMFKDmaADPYLASAGIASDWPCGRGCYQSEDGGFIIWFGEEDQLRIMCMAKGFMLNDVFDRLQTALAVVEaiDGIEFAKSEKYGYVTSCPSNLGTGMRASVHVKVPNLTAD 141
                 7999***************99***************************************************************999***********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|2140_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.74
# Mc/sec: 446.89
//
Query:       MMETSP1325-20131115|2139_1  [L=349]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-35  120.9   1.6    7.6e-35  120.4   1.1    1.2  1  PF00291.20 Pyridoxal-phosphate dependent enzyme
    0.00016   20.9   0.0     0.0004   19.7   0.0    1.7  1  PF01842.20 ACT domain


Domain annotation for each model (and alignments):
>> PF00291.20  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.4   1.1   1.1e-38   7.6e-35     141     307 .]       2     162 ..       1     162 [. 0.92

  Alignments for each domain:
  == domain 1    score: 120.4 bits;  conditional E-value: 1.1e-38
                 T-CHHHHHHHHT-HHCCCHHHH----..-B--------HHHHHHCCCCCTH.TT---EEEEEGGG-TT-...............S...----T.TT-GGGHHHHSS---EEE.EE-HHHHHHHHHHHHHH-----------HHHHHHHHHH-..HHT.G----EEEEE-B CS
  PF00291.20 141 sndpdviaGygtiglEileqlgkpdpdavvvpvGgGgliaGiakglkelil.pkirvigvepegsdalarslragervqldkkttia.glscgtpldgelafelidelvdevvtvsdeealeavrllarregivvepsgaaalaallraekegslaa.gkgkrvvvvltg 307
                 ++dp ++aG gt+glEileql  p+ ++vv+p+Gg gl+aG a ++k   l p++rvigvep  ++++ ++l+age+v  ++++t+a gl+ +t   g  af +++e+ dev  v + e++ a+++l + e++vve  ga++laa+l     g l +  +gk+vvv l+g
  MMETSP1325-20131115|2139_1   2 YDDPEIVAGAGTMGLEILEQL--PETEYVVIPCGGAGLLAGAALAMKT--LkPTCRVIGVEPVRCPSFLAALEAGEPVAAPTTPTLAdGLAVPT--VGGNAFLVAREYTDEVELVGEHEIALAMLRLIESEKLVVEGGGATGLAAILPG---GPLHKeVQGKKVVVPLCG 162
                 489******************..55557********************..778*************************9888878888**9999..**************999*********************************974...4444467999****9998 PP

>> PF01842.20  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   5.8e-08    0.0004       6      54 ..     190     243 ..     185     253 .. 0.73

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 5.8e-08
                 EEESSTHHHHHHHHHHHHTT--ECEEEEEEESS......EEEEEEEEEECHHHH CS
  PF01842.20   6 gvpDrPGlLaevfgaLadrgiNidsisqstsgdk.....agivfvtvvvdeedl 54 
                  v D+PG +a ++++Lad g +i +i++ +   +     +   ++ + ++ e++
  MMETSP1325-20131115|2139_1 190 QVSDQPGGIAGLTKILADEGGSIKDIYHERAWLQtsisnVQAKVILETTGKEHA 243
                 688************************999866655555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.71
# Mc/sec: 1177.93
//
Query:       MMETSP1325-20131115|2134_1  [L=1012]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-43  148.5   0.0    3.3e-43  147.9   0.0    1.3  1  PF07394.7 Protein of unknown function (DUF1501)
    1.8e-22   79.8   0.0    2.3e-22   79.4   0.0    1.2  1  PF08811.6 Protein of unknown function (DUF1800)


Domain annotation for each model (and alignments):
>> PF07394.7  Protein of unknown function (DUF1501)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.9   0.0   4.8e-47   3.3e-43       1     342 [.     589     950 ..     589     987 .. 0.78

  Alignments for each domain:
  == domain 1    score: 147.9 bits;  conditional E-value: 4.8e-47
   PF07394.7   1 akrvIvlflaGGpsqldtfdpkpdleklagkplp..kfkqtgesgleisellphl....aeladdlalvrsmstelan..hgqaallmntGsqllgrPsvgswvtyglgsenenlPafvvlhn......ergaagagsanwgsGflgralqgltlrssadp.......vldlsppegvteerqrrrldllkklnqehl......qrkndeeleariasyelafralmqseapeafdlsdeteatreaygrdaketks........fgaqcLlarrlvergvrfvqvylggWDtHsnlekahkklakelDqalaaLlkdLkqrGllddTlVvwggEFGRtpkingnkGrDHnpkgftvwlaGGgvkgGrvyGatdelg 342
                 +k++++ + +GG + ++++ p+++ +  +   ++  +++ +g  +l   e+lp       +  + +++++s++t l n   g+a +l n G        +++++++++++++++lP  ++ hn      ++g+ag+ +   ++G lgr ++ ++   +++        +++l  + + t+ +    ++ + ++   +       ++ ++ + ++  ++   +f++l++++ + +  lsd  +++       +    s        ++a+++ a++ +e+ + ++ ++lgg+DtH++l++ ++ ++  + +al+++++++k++Gl++++++v+g+EFGRt+++ng  G+DH ++g ++w++ G+++g rv G+ ++  
  MMETSP1325-20131115|2134_1 589 YKAIVYFYFNGGLDSYNILMPHSKCNGTGSAHVRaqYESVRGAVALDKDEILPIDpgnpDQPCEYMGIHPSLTTVLDNyeCGDALFLANIGPL------IEPVTKAEYEDGTKQLPFGIFAHNtqttqvQSGHAGYTH---AQGLLGRIVDSISGTVDSAIdepyranIYSLAGTVKATDGNYPTSVVSAGSGPVVMTaydelgEFVSNISRQESTSVMSETFSSLLEQSINSGQTLSDVLDSIDTTVDFSR----SdntnkafyQAARIIKAHKILESERDVFYISLGGFDTHASLQDVVEAKMDVVNTALEEFIEEMKAQGLWNNVTIVTGSEFGRTMANNGV-GTDH-GWGGNHWVMSGAINGSRVLGQYPTDL 950
                 69*************************99999999899999**************6555555555*******8877779999********877......************************966544444444444...46**********98444444569****555555555555555555555444444444000001444444444444444444444555555555555554444443333333....1333456889******************************************************************************9.****.*********************99754 PP

>> PF08811.6  Protein of unknown function (DUF1800)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.4   0.0   3.4e-26   2.3e-22     239     460 ..     270     564 ..     232     566 .. 0.81

  Alignments for each domain:
  == domain 1    score: 79.4 bits;  conditional E-value: 3.4e-26
   PF08811.6 239 vLgktiaa..qggeeegeavLdlLarhpatarfisrkLarrFvadnPppalverlaatFkkt..........dgdlravlkalllspeawse.eae....gaklkePlelvvsalRalgaepedan....kqlvsllnqlgqplfrpps..........Pagypdaaaawvapeallarlnfaaqlanqvikgvkv.....................................dlealaeeeeeadaealaallqellag..alseetrqalaqalskqq........llalllsspeFq 460
                 v++   ++  +++e e+ a++d+++ h+++a+f++ +L++r v++nP+p +v ++ ++F+             gdl a+++a+ll++ea+s+        ++ ++ePl  ++++ Ral+++p +++     +++sl +++g++ +++ps          P+g +  ++++ apea +a+  f+   +n+v +  +                                      + +  ++    +d + + + l+ ll    +++++ ++ ++ a +k++        +l+++ ++ +Fq
  MMETSP1325-20131115|2134_1 270 VFNDVAEQnvRDAEYEAGALMDHVFWHKNCAPFLAYRLIQRMVTSNPSPRYVRTVVEAFRTGtyggkvysgeYGDLGATFAAILLDREARSSlL-DldptFGLIREPLIKLLHLFRALEFTPGPGWeradFEIQSLEEDIGEQAYQMPSvfnffqwnfaPNGVA-LNQGLFAPEAGIANGPFMLGWVNGVRSLFEFglincdsgfgtsepvsasdvscssarsrvqalaagslQWRPSSN---YTDVKGVLDELELLLVPsgRMNKKNKKLVEAAYDKRSathdklsdALQVMTTTSDFQ 564
                 55555555677899999******************************************9778999999999*******************953.246889*********************999779999*******************************65.99********************99988777788888888888888888888888888877777765432222222...334444444444444444677777777777777777777777777777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1012 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       470  (0.0343768); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.52u 0.41s 00:00:01.93 Elapsed: 00:00:00.94
# Mc/sec: 2579.91
//
Query:       MMETSP1325-20131115|2142_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-14   52.5  16.2    3.7e-14   52.2  11.2    1.0  1  PF06912.6  Protein of unknown function (DUF1275)
  ------ inclusion threshold ------
        5.9    7.1   9.8       0.28   11.3   1.0    2.7  2  PF02588.10 Uncharacterized BCR, YitT family COG1284


Domain annotation for each model (and alignments):
>> PF06912.6  Protein of unknown function (DUF1275)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2  11.2   5.5e-18   3.7e-14       5     205 ..      12     207 ..       8     211 .. 0.88

  Alignments for each domain:
  == domain 1    score: 52.2 bits;  conditional E-value: 5.5e-18
   PF06912.6   5 llLafvaGlvDavgflalggvfashmTGntvllglalaggnlalalakllallaFvlGaalagllkraarrrrrrsrlallllleavllliaallgaalpnteavlvtiallafamGlqnaafrklsgaeirttvmTgnltdlgidlgrllrgn..rrnrrrlllrlllvlsfllGavvGallfkllg.faalllaallllvla 205
                 ++++++  lv++++++++ +  + hmTG  +   l la+g + + ++ l++++aF++G+++agl + ++++      +a ++l+  +lll+ ++++ a       + +++++a+a G+ n +  k  ++ +r  ++Tg++td+g  +g+ +++   ++   +l+ + +l+++ l+G+  + +++ ++  ++++ la + +l+l 
  MMETSP1325-20131115|2142_1  12 YVMCLCNSLVNSATLIQF-EEVVMHMTGPSSKGPLFLASGLATSGWHNLATIGAFLIGCLFAGLATAKRDGDTPIVDCAPTILFAGLLLLVSGAMAKANV-----FSCLYVAAVAGGMLNGLTSK--MTTYRVSHVTGTVTDMGLLIGKKFASSlePALSLKLRDLTVLMGLWLVGGCTAFWMSNVMSvGKVMSLASVPVLLLG 207
                 789***************.69999*******99999999999999********************88888888888888899998888888888885554.....599************99876..689999****************999997544778999999999999**************96688888888887775 PP

>> PF02588.10  Uncharacterized BCR, YitT family COG1284
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.7       0.2   1.4e+03       3      15 ..      63      75 ..      59      78 .. 0.72
   2 ?   11.3   1.0   4.1e-05      0.28       2      61 ..     115     209 ..     114     213 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.2
  PF02588.10  3 lfaiigglllglg 15
                 +++ig+l++gl+
  MMETSP1325-20131115|2142_1 63 GAFLIGCLFAGLA 75
                4677888888876 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 4.1e-05
  PF02588.10   2 llfaiigglllglgisif.lkagastgGtdgiayylskkkg..................................isigsillliniilliisll 61 
                 +++a+ gg+l+gl+  ++ +++  +tg ++ + +++ kk+                                   +s+g+++ l  +++l+++l+
  MMETSP1325-20131115|2142_1 115 YVAAVAGGMLNGLTSKMTtYRVSHVTGTVTDMGLLIGKKFAsslepalslklrdltvlmglwlvggctafwmsnvMSVGKVMSLASVPVLLLGLK 209
                 89**************9736666******************999999999999999999999999999999999999999999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.41s 00:00:00.88 Elapsed: 00:00:00.59
# Mc/sec: 869.19
//
Query:       MMETSP1325-20131115|2143_1  [L=524]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-27   94.0  17.7    2.8e-19   69.0   1.5    2.0  2  PF07690.11 Major Facilitator Superfamily
    1.1e-05   24.1  25.8    9.1e-05   21.0   4.2    2.5  2  PF00083.19 Sugar (and other) transporter
     0.0026   15.8   0.8     0.0046   15.0   0.5    1.3  1  PF05977.8  Transmembrane secretion effector
  ------ inclusion threshold ------
      0.015   14.5   0.0       0.18   11.0   0.0    2.6  3  PF13567.1  Domain of unknown function (DUF4131)


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   1.5   8.1e-23   2.8e-19      28     271 ..       5     267 ..       2     271 .. 0.72
   2 !   31.0   5.4   2.7e-11   9.3e-08      63     174 ..     274     392 ..     265     437 .. 0.77

  Alignments for each domain:
  == domain 1    score: 69.0 bits;  conditional E-value: 8.1e-23
  PF07690.11  28 gispseigwlltlyslgyaiasllaGrlsdrfGrrrvlllglllfalglllll...fa.sslwa.lllvlrvlqGlgagalfpagaaliadwfpk..eergralgllsagfslGailgpllggllasslgWravFlilailsllaavlvllll...........prepperkrkspaeelrkepaplvpawklllkppvlwillialllfffvfsg....lltllplylqevlglsp.........glllaglllgllaligaigalllgrls.dr 271
                 gi++ +ig l+t+ + g++++++l+ +l+d++Gr+ v+++++ ++ ++ +++    f  s++ + l++ + +++Gl+ g+ fp+++++i+d++ +  +     +  + a+  ++++   +lgg++a  +g  ++ l+ a+++l++++l  +++           + ++ ++ +ks+++e    +++   a  +++++ +l  l +++ +ff++f++    +   l l  ++ +gl +            l+++l++++  +++ + + +g+ls  +
  MMETSP1325-20131115|2143_1   5 GIDVESIGPLYTARYGGQIVSNILMPPLADKYGRKLVVMWSIGGSMVA-YIIQgiaFRfSGYEFaLMFGGKLIAGLF-GGTFPIVLTYITDISMPdlKLLKTRITQAVATLMAAPVALQPLGGAIA-TFGLYLPLLVSAGIALVGLILTQCFMtevfkpggdekVKDEDNSLKKSDEKE---DESK---ARPSVWRDTPL--LTLGASFFFVAFFIvgqqIQPPLLLE-RSSFGLEEdtetktqekI-ALTAGLVAIPTSLVCTFVMTVGYLSlSK 267
                 7899999*****************************************.6666645315444430677777788888.8***************955566777777778888899999*******9.99******************99999955444444333333333333333333...4444...45588888878..55555555555555323333333333.67777777999999**64.5555567777777777778999999666 PP

  == domain 2    score: 31.0 bits;  conditional E-value: 2.7e-11
  PF07690.11  63 rvlllglllfalglllll.fasslwalllvlrvlqGlgagalfpagaaliadw....fpkeergralgllsagfslGailgpllggllasslgWravFlilailsllaavlvllll.....p 174
                  ++++g +l+a++ ++ + ++  +w  l+v+ ++qG+g+g+++ a++a+ +++    fpk + +++ g++++++ +G++++ +   +l++s g  a+++  +++++l++++++ +       
  MMETSP1325-20131115|2143_1 274 TCVFVGGVLAAVS-FFVVpMTERVW-QLCVVNAVQGAGCGMFMGAVQAMPSKYlaivFPK-DIASGRGVYNLMMTIGTMVAGIPLTMLYQSNGIAASYWCTGAAMILSTIFGVSFSrqihkK 392
                 5567777777777.33333468999.**********************977762222666.*****************99999999**********************99877666555552 PP

>> PF00083.19  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   4.2   2.7e-08   9.1e-05      58     136 ..      21     100 ..      16     185 .. 0.82
   2 !    9.7   7.2   7.3e-05      0.25      44     171 ..     239     370 ..     214     386 .. 0.70

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 2.7e-08
  PF00083.19  58 galiGslfaglladrfGRkksllvalvlfvigavlqaaakak..ksvwvlivgRvivGlgvGlisvlvPmyisEiApkklr 136
                 g++++ +++ +lad++GRk + ++++  ++++ ++q++a      ++++++ g++i+Gl+ G+   +v +yi  i+ + l+
  MMETSP1325-20131115|2143_1  21 GQIVSNILMPPLADKYGRKLVVMWSIGGSMVAYIIQGIAFRFsgYEFALMFGGKLIAGLF-GGTFPIVLTYITDISMPDLK 100
                 78999**********************************954889**************8.55566777788888766655 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 7.3e-05
  PF00083.19  44 ssvlsglivssflvgaliGslfaglladrfGRk..ksllvalvlfvigavlqaaakakksvwvlivgRvivGlgvGlisvlv....PmyisEiApkklrgalgslyqlaitvGilvaaiiglglnktsn..adgwr 171
                  ++  gl++  +++ +++   +++l  ++ G     +  v++vl +++ ++  +++    vw+l+v  +++G g+G+  ++v    + y++ + pk + +   ++y+l++t+G +va i    l ++++  a++w 
  MMETSP1325-20131115|2143_1 239 IALTAGLVAIPTSLVCTFVMTVGYLSLSKRGLSdeTCVFVGGVLAAVSFFVVPMTE---RVWQLCVVNAVQGAGCGMFMGAVqampSKYLAIVFPKDIASG-RGVYNLMMTIGTMVAGIPLTMLYQSNGiaASYWC 370
                 55666666666777777777666666666666654788888899999999888888...9**********988877776665333267888888****955.46799**********9866666555554456665 PP

>> PF05977.8  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.5   1.3e-06    0.0046     278     399 ..     267     391 ..     254     409 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.3e-06
   PF05977.8 278 rrrlsserlvllaavalAlvllslalssslwvavlvlllgGaa...Wiaalstlnv.avqlavprWvrgRalsvYltv.laGglaaGsllWGtvaealslelaLllaavalllgallllllrlpege 399
                 +r ls e+ v ++ v  A+  +++ +++++w++++v ++ Ga+   ++ a+  + +    ++ p+ +      vY ++ + G++ aG     ++ ++ +++ +  ++++a++l+++ ++++  +  +
  MMETSP1325-20131115|2143_1 267 KRGLSDETCVFVGGVLAAVSFFVVPMTERVWQLCVVNAVQGAGcgmFMGAVQAMPSkYLAIVFPKDIA-SGRGVYNLMmTIGTMVAGI-PLTMLYQSNGIAASYWCTGAAMILSTIFGVSFSRQIHK 391
                 6779999**********************************973334555554444145566676664.3446887651678888875.558999*********************99988755555 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.4e-05      0.18       3      65 ..     125     218 ..     123     249 .. 0.83
   2 ?   -1.9   0.0       0.5   1.7e+03      16      55 ..     252     288 ..     237     295 .. 0.44
   3 ?   -0.6   0.0       0.2   6.7e+02       3      35 ..     352     387 ..     350     407 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.4e-05
   PF13567.1   3 Gillaalaslplgllllalllalllllllflkr...............................rkrrrlllllglllllaglylllrapqpss 65 
                 G ++++ + lpl + + ++l+ l+l+ ++                                    +r + ll lg+ ++++++++  ++ qp+ 
  MMETSP1325-20131115|2143_1 125 GAIATFGLYLPLLVSAGIALVGLILTQCFMTEVfkpggdekvkdednslkksdekedeskarpsVWRDTPLLTLGASFFFVAFFIVGQQIQPPL 218
                 445557778888888888888888888888766**************************99888888888999999999999999999999875 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.5
   PF13567.1  16 llllalllalllllllflkrrkrrrlllllglllllagly 55 
                 l++ +++ +  l l    kr  +  +++++g +l++++++
  MMETSP1325-20131115|2143_1 252 LVCTFVMTVGYLSL---SKRGLSDETCVFVGGVLAAVSFF 288
                 22222222222222...12244444455555555555554 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.2
   PF13567.1   3 Gilla...alaslplgllllalllalllllllflkr 35 
                 Gi l+   + +++  ++++ +++++l +++ + + r
  MMETSP1325-20131115|2143_1 352 GIPLTmlyQSNGIAASYWCTGAAMILSTIFGVSFSR 387
                 664444556677778888888888888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       596  (0.0435927); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.96u 0.34s 00:00:01.30 Elapsed: 00:00:00.62
# Mc/sec: 2025.31
//
Query:       MMETSP1325-20131115|2146_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.072   12.4   0.1      0.096   12.0   0.1    1.2  1  PF00340.14 Interleukin-1 / 18


Domain annotation for each model (and alignments):
>> PF00340.14  Interleukin-1 / 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1     7e-06     0.096      49      88 ..      16      58 ..      11      75 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7e-06
                EEEEEE--.TTT-S-SS--GGGEEEEEESSS-EE....EEESSS CS
  PF00340.14 49 vlqleeveipklikkkesdkiFvFkksesknttk....Fesaay 88
                vl++e+ve   l+kk+++++i+ Fk++  + +++    Fes   
  MMETSP1325-20131115|2146_1 16 VLEKEMVEKDALVKKTKEEMIY-FKRELLNREENfnkkFESGGS 58
                89********************.*99866655443345887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 563.59
//
Query:       MMETSP1325-20131115|2145_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.59    9.2  27.3       0.71    8.9  18.9    1.1  1  PF07174.6 Fibronectin-attachment protein (FAP)
        0.7   10.2  12.5        1.5    9.1   8.6    1.5  1  PF10667.4 Protein of unknown function (DUF2486)


Domain annotation for each model (and alignments):
>> PF07174.6  Fibronectin-attachment protein (FAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  18.9    0.0001      0.71      37     138 ..       6     106 ..       1     125 [. 0.63

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0001
   PF07174.6  37 anadPePaPsapPstaaaaPapaapvaepapaaapapapadpnaaaPpapadPnapvPppvdPnapap...papepgrvdnavGGfsyvvPaGwkesdasqldyG 138
                 a a P+PaP+ +P++a+a   +++p++epapa++papapa  + +a  ++ad  +++P++v+P a a    p+p +  v+    G+ ++   G+++ +    dyG
  MMETSP1325-20131115|2145_1   6 APA-PAPAPALAPAPAPA--PAPQPTSEPAPAPPPAPAPARKPDSAADPAADA-SSTPSTVAPSALATgdkPKPATPVVKKLEFGMVHIRHYGYRVGQGIASDYG 106
                 332.55555444444433..235566778888888888875443333323443.457888888887666556666667777777888888888888887777777 PP

>> PF10667.4  Protein of unknown function (DUF2486)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   8.6   0.00022       1.5      74     203 ..      20     157 ..       2     164 .. 0.62

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00022
   PF10667.4  74 avePvptpevpavelPaddtdapaepaaaeevvaeraa.ameaplpsaLaaddaaaesaeat.........elpaadaapdavppaaasaavpeiaaaaaeaaaaltdedAqhiAERLrnRlanyLtgeGRdlIEaRCRd 203
                 a+ P p p+ + + +P+  + apa+  ++   +a +a+   +  +psaLa++d   +++ ++          ++ + +  +  + + +  +  + ++ ++e    lt  +A+ +AE+  +   +y  geGR + E+R R 
  MMETSP1325-20131115|2145_1  20 APAPAPQPTSEPAPAPPP-APAPARKPDSAADPAADASsTPSTVAPSALATGDKPKPATPVVkklefgmvhIRHYGYRVGQGIASDYGPPVGLAWRH-DPELDDHLTIDEAEELAEKCNRIPFTYFGGEGRLAPEERIRK 157
                 222333333333333333.566666555555555555505567899999999999998888877766633322222222333333333333333333.6999999************9888889*************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.42s 00:00:01.04 Elapsed: 00:00:00.73
# Mc/sec: 863.35
//
Query:       MMETSP1325-20131115|2144_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-13   50.1   1.3    4.4e-13   48.9   0.1    2.4  2  PF00288.21 GHMP kinases N terminal domain
      2e-06   27.7   0.0    4.7e-06   26.5   0.0    1.7  1  PF08544.8  GHMP kinases C terminal
     0.0088   15.6   0.2      0.034   13.7   0.0    2.1  2  PF06522.6  NADH-ubiquinone reductase complex 1 MLRQ subunit
  ------ inclusion threshold ------
       0.08   12.6   0.1        8.4    6.1   0.0    2.7  2  PF04471.7  Restriction endonuclease


Domain annotation for each model (and alignments):
>> PF00288.21  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1         2   6.7e+03      15      24 ..      27      36 ..      21      56 .. 0.61
   2 !   48.9   0.1   1.3e-16   4.4e-13       2      67 .]     192     255 ..     191     255 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2
                -HHHHHHHHH CS
  PF00288.21 15 GSSAalaval 24
                + +Aa+a++ 
  MMETSP1325-20131115|2144_1 27 ACGAAMAAGY 36
                4444444443 PP

  == domain 2    score: 48.9 bits;  conditional E-value: 1.3e-16
                 EEEEESS-TT----HHHHHHHHHHHHHHHHTT-SS...HHHHHHHHHHHHHHTT----SHHHHHHHHCT CS
  PF00288.21   2 ivvesdiPigaGLGSSAalavalaaAllalyglpl...deeelaklaleaekaigkpsGidvaaavyGg 67 
                 ++++++iP ++GLGSS+a++v+ + A l l+g++l     eel+++a ++e     +++++va+a+yGg
  MMETSP1325-20131115|2144_1 192 YTCTNRIPYARGLGSSSAAIVGGIIAGLVLSGHKLkmwGAEELLQIACDIE-----GHPDNVAPAIYGG 255
                 67899***************************997555779**********.....6***********8 PP

>> PF08544.8  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   1.4e-09   4.7e-06       8      71 ..     311     392 ..     293     406 .. 0.81

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 1.4e-09
   PF08544.8   8 gdiellgellnenqls...........eplayvgilspelrellealeelGalgaklsGaGgGptvfalf..........kdkdd 71 
                 g+i++l ++l  n+l+           +p ++ ++++++l+ +++a+e++Ga+  +lsGa  Gp+v a++          ++k++
  MMETSP1325-20131115|2144_1 311 GRIAWLVNALATNHLDnlkfgvqdklhQP-QRGEKVYRHLMPMIKAAESAGACCCYLSGA--GPSVLAITsgqsgdifaqREKER 392
                 77888888999999999999999999977.699***************************..********666666666644444 PP

>> PF06522.6  NADH-ubiquinone reductase complex 1 MLRQ subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   9.8e-06     0.034       2      31 ..      15      44 ..      14      79 .. 0.88
   2 ?   -2.0   0.1      0.77   2.6e+03      39      61 ..      92     114 ..      90     120 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 9.8e-06
   PF06522.6  2 krpelyPLfvavgvavgiaafslvRllltn 31
                k+ e+ P+++ +++++++aa +l+R llt+
  MMETSP1325-20131115|2144_1 15 KKVEIDPMMIGIACGAAMAAGYLARSLLTD 44
                577999*********************997 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.77
   PF06522.6  39 knrpepwekykphkqrkflrnrr 61 
                  +r e+++k +++  + f + rr
  MMETSP1325-20131115|2144_1  92 VKRQEEQNKIQKETIEEFAAARR 114
                 56789999999999988888776 PP

>> PF04471.7  Restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0024       8.4      48      74 ..      86     114 ..      57     132 .. 0.83
   2 ?    3.4   0.0     0.016        55      54      90 ..     386     422 ..     379     439 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0024
   PF04471.7  48 erilvqaKry..knkvgreevqelvgalk 74 
                  +++ ++Kr+  +nk+++e+++e+++a  
  MMETSP1325-20131115|2144_1  86 AKMAARVKRQeeQNKIQKETIEEFAAARR 114
                 488999****7669**********98865 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.016
   PF04471.7  54 aKryknkvgreevqelvgalkkekadkgifvttsdft 90 
                 a r k +v+r   +++++a+++ + d  +f+t+  ++
  MMETSP1325-20131115|2144_1 386 AQREKERVDRAVADAMLAAAASAGMDGEVFITNPILS 422
                 5677899*************************97666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.36s 00:00:01.12 Elapsed: 00:00:00.71
# Mc/sec: 1498.57
//
Query:       MMETSP1325-20131115|2148_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   13.2   1.5      0.042   12.8   0.0    1.8  2  PF06626.7  Protein of unknown function (DUF1152)
       0.13   12.2  16.1        0.2   11.5  11.1    1.3  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.22   11.2  20.5      0.047   13.3  10.3    2.2  2  PF12718.2  Tropomyosin like
       0.48    9.9  12.1        1.2    8.6   8.4    1.6  1  PF03962.10 Mnd1 family
        5.7    6.5  13.8         36    3.9   0.0    3.0  2  PF02996.12 Prefoldin subunit


Domain annotation for each model (and alignments):
>> PF06626.7  Protein of unknown function (DUF1152)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.5e-05     0.042     215     282 ..      92     159 ..      84     163 .. 0.92
   2 ?   -1.8   0.4      0.42   1.1e+03     282     289 ..     214     221 ..     173     244 .. 0.45

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.5e-05
   PF06626.7 215 AskiplkafrGeyGeleiRkgtrkvevsplsavtffldpeavaelsklaklveesesleeaneklnel 282
                 A + +++++  ++G+ e+ +gt  v  + + ++ f+ +++a +++ ++   ++   s+eea++++ne+
  MMETSP1325-20131115|2148_1  92 AETTAIETAMPLFGPQEMQEGTIVVAFESIGTAAFYWESKAFLRTRNVKYSITAYPSVEEARAAINET 159
                 566778888999****************************************************9985 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.42
   PF06626.7 282 lgiytEld 289
                 +   tE +
  MMETSP1325-20131115|2148_1 214 KITNTEKE 221
                 11122222 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5  11.1   7.2e-05       0.2      14      99 ..     156     245 ..     148     247 .] 0.87

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 7.2e-05
                 HHHHHHH-.TTHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHGGGTTT....HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  14 vkeklkkRgedkedvdelleldeerrelqveleelqae..rNelskeIgkakkkk..edaeeliaevkelkeelkaleaelkeleaelek 99 
                 + e  +k ++ k++ d++++l++e+ e+q+++  ++a   +++ ++ I++ k +   +++++  +e +++++e+ ++e++l+e+ea++e+
  MMETSP1325-20131115|2148_1 156 INETKEKGRAMKANADSIISLQAEWAEAQAAVTAAKAAvsKKQSAQRIEEVKLSTlqKKITNTEKEQEKIAKEIVEAEEKLAEMEAAQEA 245
                 44444444499*************************95338899999*****999999**************************998875 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1       0.1   2.8e+02      89     112 ..     149     172 ..     148     174 .. 0.86
   2 ?   13.3  10.3   1.7e-05     0.047       3      73 ..     174     244 ..     172     247 .] 0.92

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.1
   PF12718.2  89 leesekrLketteklreadkkaee 112
                 +ee+ + ++et ek r ++ +a+ 
  MMETSP1325-20131115|2148_1 149 VEEARAAINETKEKGRAMKANADS 172
                 588999999999999999999986 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 1.7e-05
   PF12718.2   3 nalklEaenaqekaeeleeklKeleqenekkEeeiksLqkKnqqlEeevekleeqlkeakekleekekkkt 73 
                  +l++E  +aq+ ++++++ + +++  ++  E +++ LqkK++++E+e ek+ +++ ea+ekl e e +++
  MMETSP1325-20131115|2148_1 174 ISLQAEWAEAQAAVTAAKAAVSKKQSAQRIEEVKLSTLQKKITNTEKEQEKIAKEIVEAEEKLAEMEAAQE 244
                 57999*********************************************************999988765 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   8.4   0.00043       1.2      44     149 ..     115     244 ..     110     247 .] 0.69

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00043
  PF03962.10  44 lvrveKiGtsnlYWsFpseakk........................klkteleklkkeleelkqrikelqaeiekekkkreeteeree.lleelkeleeelkklkkeleklakldpekveklkeetevake 149
                 +v  e iGt  +YW  +   +                         ++ +++++    + +l+++++e+qa++ ++k+  ++++  ++    +l++l++++++ +ke ek ak    + e++ +e+e a+e
  MMETSP1325-20131115|2148_1 115 VVAFESIGTAAFYWESKAFLRTrnvkysitaypsveearaainetkEKGRAMKANADSIISLQAEWAEAQAAVTAAKAAVSKKQSAQRiEEVKLSTLQKKITNTEKEQEKIAKE-IVEAEEKLAEMEAAQE 244
                 588999********8666655578899**9***999999999977655555555566667778888888888888766666665555535557888888888888888865553.3333333334444444 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.013        36      35      63 ..      42      70 ..      25      71 .. 0.87
   2 ?    1.4   7.8     0.076   2.1e+02      81     111 ..     210     240 ..     144     246 .. 0.76

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.013
                --SS--B-EE-----EE----S-TTEEEE CS
  PF02996.12 35 edegkevlvplgaglyvkaevkdtdkvlv 63
                e    e++v  g +l +++e++d++++lv
  MMETSP1325-20131115|2148_1 42 EHTTGEMTVSPGTKLNLPVEIVDKNSALV 70
                667789*******************9998 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.076
                 HHHHHHHHHHHHHHHH---HHHHHHH---HH CS
  PF02996.12  81 llkkkleelekqlekleeeleklkdqittle 111
                 +l+kk+++ ek +ek+ +e+ ++ +++ ++e
  MMETSP1325-20131115|2148_1 210 TLQKKITNTEKEQEKIAKEIVEAEEKLAEME 240
                 4555555555555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2035  (0.148844); expected 273.4 (0.02)
Passed bias filter:                      677  (0.0495173); expected 273.4 (0.02)
Passed Vit filter:                        95  (0.00694851); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.71u 0.41s 00:00:01.11 Elapsed: 00:00:00.60
# Mc/sec: 986.50
//
Query:       MMETSP1325-20131115|2149_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   18.6   1.2     0.0015   18.6   0.8    4.9  4  PF06005.7  Protein of unknown function (DUF904)
  ------ inclusion threshold ------
      0.057   11.3  39.5     0.0045   15.0   4.5    3.1  3  PF10174.4  RIM-binding protein of the cytomatrix active zone
       0.97    8.4   7.7        8.5    5.3   0.1    2.9  3  PF04582.7  Reovirus sigma C capsid protein
        1.1    9.0  34.0      0.047   13.4   1.4    3.4  3  PF11559.3  Afadin- and alpha -actinin-Binding
        2.7    6.9  34.6       0.19   10.6   3.3    4.1  3  PF00261.15 Tropomyosin
        6.1    6.4  15.5        0.7    9.5   0.2    3.1  3  PF12938.2  M domain of GW182


Domain annotation for each model (and alignments):
>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.0  10.0         6   1.4e+04      22      56 ..      10      51 ..       1      87 [. 0.61
   2 !   18.6   0.8   6.4e-07    0.0015       7      70 ..      93     159 ..      89     161 .. 0.91
   3 ?   -3.3   5.5       4.7   1.1e+04      16      70 ..     180     246 ..     171     248 .. 0.62
   4 ?    0.2   3.0      0.37   8.4e+02      22      39 ..     237     264 ..     226     292 .. 0.58

  Alignments for each domain:
  == domain 1    score: -7.0 bits;  conditional E-value: 6
                HHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHH...HHH- CS
   PF06005.7 22 lLqmeieeLkeeneqlk....eeneeLeeenkklk...eere 56
                 L++e+ + k++  +++    +++ e+++ n+  +   eer+
  MMETSP1325-20131115|2149_1 10 QLKNELTKIKKQIVSSEqiiaNQRAEIQKLNQIIQeadEERQ 51
                455555555554444445555444444444444444434444 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 6.4e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHH---TTHHHHH----- CS
   PF06005.7   7 eeLeskiqqAvdtialLqmeieeLkeeneqlk...eeneeLeeenkklkeereawqerlralLgkle 70 
                 ++ e+++q+ + +i+ Lq +i+  ++e ++++      + L++  ++l +e    q+++ral + ++
  MMETSP1325-20131115|2149_1  93 QHGEARYQECLAEIEFLQSRIASMRKERDDSSlqvADISDLKATTQQLERELLHEQTKVRALSEEMD 159
                 55699**********************999999998999**********************988887 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 4.7
                 HHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHH.........HHH---TTHHHHH----- CS
   PF06005.7  16 AvdtialLqmeieeLkeeneqlk...eeneeLeeenkklk.........eereawqerlralLgkle 70 
                 +v +i+ Lq++i    ee  +     +e+e L  e k+           e+ +  q+ l++ L++++
  MMETSP1325-20131115|2149_1 180 LVKKIQGLQKRIITKTEEVVEKDlliQEKERLYVELKNILgrqpgpevaEQLSVYQSNLKQKLQQMK 246
                 5667777777776555542222233344555544444444788888887777778888888777777 PP

  == domain 4    score: 0.2 bits;  conditional E-value: 0.37
                 HHHHHHHHHHHHHHHHH..........H CS
   PF06005.7  22 lLqmeieeLkeeneqlk..........e 39 
                  L++++++ k  n++l            
  MMETSP1325-20131115|2149_1 237 NLKQKLQQMKAMNAELDmykqqvdefrY 264
                 4777777777777777755533333332 PP

>> PF10174.4  RIM-binding protein of the cytomatrix active zone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   6.8    0.0041       9.3     668     717 ..       3      52 ..       1      61 [. 0.66
   2 ?    3.4   6.6    0.0063        14       7      98 ..      59     160 ..      52     185 .. 0.70
   3 ?   15.0   4.5     2e-06    0.0045     420     515 ..     189     279 ..     179     292 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.0041
   PF10174.4 668 klesdlkqlkaEleqlklqleksqeslmekqqeLqaleaElrkqlEevlk 717
                 k+e++ +qlk+El+++k q+ +s ++++++ +e+q l+   +   Ee  +
  MMETSP1325-20131115|2149_1   3 KVEKEKEQLKNELTKIKKQIVSSEQIIANQRAEIQKLNQIIQEADEERQR 52 
                 67778888888888888888888888888877777666555555554433 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.0063
   PF10174.4   7 evvrEnesLkkelevkqsklgksmseikkfwSpelkrerelrkkeaaelsvlkee...lrvtqeeae.......kaqeevqaLQekL.ksqrelerLlqklek 98 
                  +v+E++ L  +l + +++l k+   ik  wS  l++  ++ ++  ae++ l++    +r+++++          ++ + q+L  +L + q  ++ L ++ + 
  MMETSP1325-20131115|2149_1  59 AIVGERNILSSQLIRREAELAKIYEKIKIHWSS-LQHGEARYQECLAEIEFLQSRiasMRKERDDSSlqvadisDLKATTQQLERELlHEQTKVRALSEEMDR 160
                 58999999********************99985.777788888888888888876111444444433434444466777777777777777777777777554 PP

  == domain 3    score: 15.0 bits;  conditional E-value: 2e-06
   PF10174.4 420 eRlrsqtDtsntdtaleklekalaekeriieklkeqRdre.ereesEelekykkkleklkeevqnleskLsekelqLellkeevsklisnqeKqrse 515
                 +R+      ++t++++ek +  ++eker+  +lk++  r+   e +E+l  y+ +l++  +++++++++L   + q +  + e+s+++s+q+K + +
  MMETSP1325-20131115|2149_1 189 KRII-----TKTEEVVEK-DLLIQEKERLYVELKNILGRQpGPEVAEQLSVYQSNLKQKLQQMKAMNAELDMYKQQVDEFRYEISNVVSAQNKVKQD 279
                 4544.....677888877.788999*********987665256889**********************************************96654 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.2     0.027        62      73     135 ..       9      71 ..       2      90 .. 0.75
   2 ?    4.5   0.3    0.0065        15      62     125 ..      89     155 ..      67     166 .. 0.54
   3 ?    5.3   0.1    0.0037       8.5      49     102 ..     222     275 ..     169     287 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.027
   PF04582.7  73 ddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevdanstdisnlksdv 135
                 +++k el+++++++ + ++ +++  +e+++l +++++ d+      +e da  ++   l s++
  MMETSP1325-20131115|2149_1   9 EQLKNELTKIKKQIVSSEQIIANQRAEIQKLNQIIQEADEERQRQAKEHDAIVGERNILSSQL 71 
                 678889999999999999999999999999999999888888777777777777666666655 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0065
   PF04582.7  62 sadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahd...aalsslqtevdans 125
                  + lq+     ++  ae++ l++ +a++++  d +s ++ad+s+l  + +     l + qt+v a+s
  MMETSP1325-20131115|2149_1  89 WSSLQHGEARYQECLAEIEFLQSRIASMRKERDDSSLQVADISDLKATTQqleRELLHEQTKVRALS 155
                 4455555555566666666666666666666666666666555554433300033333344444444 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.0037
   PF04582.7  49 esvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsselad 102
                 +   ++ ++ls  +++l++  + ++ ++ael+  +++v +++  ++++ s  ++
  MMETSP1325-20131115|2149_1 222 QPGPEVAEQLSVYQSNLKQKLQQMKAMNAELDMYKQQVDEFRYEISNVVSAQNK 275
                 5555678899999999999999******************99999998887665 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   7.6    0.0017         4      84     129 ..       3      48 ..       1      59 [. 0.76
   2 ?   13.4   1.4   2.1e-05     0.047      60     119 ..      98     160 ..      89     166 .. 0.78
   3 ?    0.7   2.9      0.17     4e+02      57     111 ..     234     288 ..     225     293 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0017
   PF11559.3  84 qlerelallqekerqlekklktleqklknekeelqrlkniiqsikt 129
                 + e+e ++l+++ ++++k++ + eq + n++ e+q+l++iiq+   
  MMETSP1325-20131115|2149_1   3 KVEKEKEQLKNELTKIKKQIVSSEQIIANQRAEIQKLNQIIQEADE 48 
                 5678888899999999999999999999999999999999887654 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 2.1e-05
   PF11559.3  60 tlrkleaeierlqskierlktqleqlerela...llqekerqlekklktleqklknekeelqr 119
                 + ++  aeie lqs+i+ + +++ ++  ++a    l+++ +qle++l ++++k+++++ee+ r
  MMETSP1325-20131115|2149_1  98 RYQECLAEIEFLQSRIASMRKERDDSSLQVAdisDLKATTQQLERELLHEQTKVRALSEEMDR 160
                 556667899999999999887777777666544478999999999999999999999999988 PP

  == domain 3    score: 0.7 bits;  conditional E-value: 0.17
   PF11559.3  57 leetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklk 111
                 ++  l+++   ++ ++ +++  k+q+ +++ e++++ +++++ ++++ + +q  +
  MMETSP1325-20131115|2149_1 234 YQSNLKQKLQQMKAMNAELDMYKQQVDEFRYEISNVVSAQNKVKQDYIRRKQEQR 288
                 4555666666666666667777777777777777666666666666655555555 PP

>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   6.6    0.0023       5.3       5      56 ..       3      54 ..       1      61 [. 0.91
   2 ?   10.6   3.3   8.4e-05      0.19     147     231 ..      75     162 ..      68     164 .. 0.76
   3 ?    1.0   2.6     0.071   1.6e+02     144     181 ..     232     269 ..     192     291 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0023
  PF00261.15  5 qleeeldkaeerleeakekleeaekraekaeaEvaslnrriqllEeelerse 56
                ++e+e ++++++l++ k+++ ++e+ ++++ aE+++ln+ iq  +ee +r+ 
  MMETSP1325-20131115|2149_1  3 KVEKEKEQLKNELTKIKKQIVSSEQIIANQRAEIQKLNQIIQEADEERQRQA 54
                6899****************************************99988765 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 8.4e-05
  PF00261.15 147 eeelkvvgnnlksLevseekaseredkyeekiklLtekLkeaetRaeeAErsv...qkLekevdrledeleaekekykaiseeldqtl 231
                 e el  + +++k    s +    r ++   +i++L++++  + +  +++  +v   + L+ + ++le el +e+ k +a+see+d  l
  MMETSP1325-20131115|2149_1  75 EAELAKIYEKIKIHWSSLQHGEARYQECLAEIEFLQSRIASMRKERDDSSLQVadiSDLKATTQQLERELLHEQTKVRALSEEMDRPL 162
                 55666666666666666666777778888899999999999876555555554222689**************************877 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.071
  PF00261.15 144 aeLeeelkvvgnnlksLevseekaseredkyeekiklL 181
                 +  +++lk+  +++k ++++ + + ++ d+++ +i ++
  MMETSP1325-20131115|2149_1 232 SVYQSNLKQKLQQMKAMNAELDMYKQQVDEFRYEISNV 269
                 45567788888888888888888888888888888764 PP

>> PF12938.2  M domain of GW182
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   2.8     0.043        97     177     210 ..       5      38 ..       1      70 [. 0.72
   2 ?    1.9   0.2     0.064   1.5e+02     155     210 ..      81     152 ..      76     191 .. 0.64
   3 ?    9.5   0.2   0.00031       0.7     160     204 ..     216     273 ..     204     314 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.043
   PF12938.2 177 rveevqlnveinklkqqisqlqnqiaaqqalyvk 210
                  +e++ql  e++k+k+qi+   + ia q a   k
  MMETSP1325-20131115|2149_1   5 EKEKEQLKNELTKIKKQIVSSEQIIANQRAEIQK 38 
                 57899**************777766666555444 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.064
   PF12938.2 155 LLsqik....qLqqaqqsLqrkgnav..............rveevqlnveinklkqqisqlqnqiaaqqalyvk 210
                  +++ik     Lq+ +  +q  +                   ++ q++  i++lk++ +ql +++  +   +v+
  MMETSP1325-20131115|2149_1  81 IYEKIKihwsSLQHGEARYQECLAEIeflqsriasmrkerDDSSLQVA-DISDLKATTQQLERELL-HEQTKVR 152
                 566666666655555555555444445555555555554344555555.59999999999999999.4445666 PP

  == domain 3    score: 9.5 bits;  conditional E-value: 0.00031
   PF12938.2 160 k.............qLqqaqqsLqrkgnavrveevqlnveinklkqqisqlqnqiaa....q 204
                 k             qL + q++L++k++       ++n e+  +kqq+ + + +i+     q
  MMETSP1325-20131115|2149_1 216 KnilgrqpgpevaeQLSVYQSNLKQKLQQ----MKAMNAELDMYKQQVDEFRYEISNvvsaQ 273
                 44445555667777999999999999988....88899999999999999999998533332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2206  (0.161352); expected 273.4 (0.02)
Passed bias filter:                      595  (0.0435196); expected 273.4 (0.02)
Passed Vit filter:                        93  (0.00680222); expected 13.7 (0.001)
Passed Fwd filter:                        51  (0.00373025); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.62u 0.41s 00:00:02.03 Elapsed: 00:00:00.99
# Mc/sec: 774.58
//
Query:       MMETSP1325-20131115|2153_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 656.60
//
Query:       MMETSP1325-20131115|2150_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-16   57.3   0.0    1.3e-15   56.9   0.0    1.2  1  PF01722.13 BolA-like protein


Domain annotation for each model (and alignments):
>> PF01722.13  BolA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   9.6e-20   1.3e-15       2      71 ..      50     113 ..      48     116 .] 0.92

  Alignments for each domain:
  == domain 1    score: 56.9 bits;  conditional E-value: 9.6e-20
                 HHHHH-SE.EEEEE--.........---EEEEEE-GGGTT--HHHHHHHHHHHHHHHGGG.-S-EEEEEE- CS
  PF01722.13   2 leaalapeelevedeshkHaghag.eshfkvvivSeaFegksrvkRhrlVyalLkeelkegiHALslktyt 71 
                 l +al+p+e++ved s      +g + ++k+++ S+ F+g ++vk+hr+V ++Lk+e+ e +H L+++t+ 
  MMETSP1325-20131115|2150_1  50 LITALQPTEVTVEDVS------GGcGAMYKIEVESPLFRGVNLVKQHRMVTETLKKEIGE-MHGLTINTRR 113
                 6789************......679*********************************98.******9874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 496.39
//
Query:       MMETSP1325-20131115|2154_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       87  (0.00636337); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 322.42
//
Query:       MMETSP1325-20131115|2147_1  [L=649]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.01u 0.42s 00:00:01.43 Elapsed: 00:00:00.63
# Mc/sec: 2468.63
//
Query:       MMETSP1325-20131115|2155_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.066   13.4   0.1       0.14   12.3   0.1    1.5  1  PF13495.1 Phage integrase, N-terminal SAM-like domain


Domain annotation for each model (and alignments):
>> PF13495.1  Phage integrase, N-terminal SAM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1     1e-05      0.14      12      61 ..      35      82 ..      33      93 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1e-05
   PF13495.1 12 kgysekTekaYlswvkrflrflkkkspeelteedveaylnyLanerkvsp 61
                k +++k++k Y    ++f +f + k+ e+l+++ +e y+n+L+   ++  
  MMETSP1325-20131115|2155_1 35 KALAKKSIKEYTPVERKFKEFSGRKHHEDLESRPFEWYANHLL--AHCTV 82
                67899*************************************9..44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 1527.68
//
Query:       MMETSP1325-20131115|2151_1  [L=614]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-70  238.1   0.0    1.7e-70  237.6   0.0    1.2  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.6   0.0   1.2e-74   1.7e-70      19     304 ..     314     601 ..     272     609 .. 0.90

  Alignments for each domain:
  == domain 1    score: 237.6 bits;  conditional E-value: 1.2e-74
                 TT---EEE-TT-......----TTHHHHHHH-------TTT--------B-HHHHHHHT.T----CCHHHTT-HHHHHHHHHHH..HS--GG...GT-BSE.E.EEE----EEEEES-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----...TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT--......--EE...EEE--.-TTS--EEEGGGTEEEE---SSHHHHHHHHHH CS
  PF00632.20  19 essgllypnkplsrdsdleessndnlklfkflGkligkaiyegilldlpfsraflkflllgkkvtledleeidpelanslkellelessteavedlaltFt.ieedkkedeielvelipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggyn...ansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelh......pkft...ivrksededrLPtasTCfnyLkLpdYsskeilkekLlt 304
                 + +g++++++  + +s++ e+s++ l+ fkf+G+++gka++e++ + ++ + ++lk+++ g ++t++dl+  d e++n+++++ e+  +++++e l+lt+t ++ ++     +++el+p+Gani++t +n +eYi+l+v+y+l +  + +l a+++G+ ev+p+  l++f+ +elel++ G  + idved++rnt+++ + +   + +   +++++i+k+++ e r++fL+FvTG+s++P+gGf++l+      +kf    i+r +  ++++P+++TCfn+++Lp+Y sk+ + e +  
  MMETSP1325-20131115|2151_1 314 PANGMFKFSETDAITSQIDEHSKEPLEKFKFIGMILGKAMMEQQAIGVHVTVPLLKLIV-GAPITWHDLQYKDTEYYNNMQSMVEM--NKDDIEYLCLTMTvPGPEG-----TEIELCPGGANIDITGDNAKEYIQLAVKYKLLTCQQSKLGAMLSGLFEVLPEPFLAVFEFNELELMLGGVAN-IDVEDWKRNTTWSSESSsgtSMNTLKTWFFDIIKSWNHETRAKFLQFVTGTSQVPIGGFKNLQgrygqiKKFEvkvINR-V-RKQQFPKSHTCFNRIDLPRYVSKKEMSELMMA 601
                 67899999999999999******************************************.***********************966..677899*******444333.....468*********************************************************************.***********9965554546668899************************************9888886666443333.3.6788**********************985544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.95u 0.38s 00:00:01.33 Elapsed: 00:00:00.53
# Mc/sec: 2776.16
//
Query:       MMETSP1325-20131115|2156_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 1343.84
//
Query:       MMETSP1325-20131115|2157_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       669  (0.0489321); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.48
# Mc/sec: 988.50
//
Query:       MMETSP1325-20131115|2158_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 374.43
//
Query:       MMETSP1325-20131115|2160_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        75  (0.00548566); expected 273.4 (0.02)
Passed bias filter:                       65  (0.00475424); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|2161_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-18   64.9   0.0    4.9e-18   64.7   0.0    1.0  1  PF03982.8 Diacylglycerol acyltransferase


Domain annotation for each model (and alignments):
>> PF03982.8  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.0   3.6e-22   4.9e-18      32     105 ..      24     100 .]      13     100 .] 0.85

  Alignments for each domain:
  == domain 1    score: 64.7 bits;  conditional E-value: 3.6e-22
   PF03982.8  32 rsnwvrrlavlkyfaeYfPvkLvktae...letdrnYliGyhPhgilsvgafvalatdatgvkekfpgirfnlatLa 105
                  s+ ++    ++  + YfPv L k +e   +++d+ Y++GyhPhgi+svg fv++  dat+ +  fpgi f  atLa
  MMETSP1325-20131115|2161_1  24 PSKRFKSSWFWRQLRAYFPVVLRKANEktqFPADKKYMFGYHPHGIISVGCFVNFVADATETERLFPGISFFGATLA 100
                 35667778889999********877655569***************************************9988885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 452.14
//
Query:       MMETSP1325-20131115|2159_1  [L=512]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-47  157.5   0.0    2.5e-21   75.0   0.0    3.5  3  PF00626.17 Gelsolin repeat
     0.0047   16.4   0.1      0.012   15.2   0.0    1.6  1  PF02209.14 Villin headpiece domain


Domain annotation for each model (and alignments):
>> PF00626.17  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.0   0.0   3.6e-25   2.5e-21       2      76 .]       8      89 ..       7      89 .. 0.97
   2 !   30.3   0.0   3.2e-11   2.2e-07      13      76 .]     144     213 ..     137     213 .. 0.92
   3 !   48.2   0.0   8.4e-17   5.8e-13       3      75 ..     248     323 ..     246     324 .. 0.93

  Alignments for each domain:
  == domain 1    score: 75.0 bits;  conditional E-value: 3.6e-25
                SEEEEEECSSGGGEBTTSEEEEEESS........EEEEEEH--SHHHHHHHHHHHHHHHHHHCTSTTEEEEEEEHHHHHHHHH CS
  PF00626.17  2 svlppvvplsqsslesgdvyLLdtgf........tiylWiGkgssqeeknfaadlaaeldseerfplpelirevqgkeparFl 76
                ++++pv++ ++++++ gd+y+L++++        +iy+W+Gk+ss +ek+++a+la+eld + +++ p+++r+vqgkepa+F+
  MMETSP1325-20131115|2159_1  8 FKKAPVPEEKYGQFYGGDSYVLLYTYmngpreeyIIYFWQGKDSSKDEKGASALLAKELD-DSMGGAPVQVRVVQGKEPAHFR 89
                7899********************************************************.999******************5 PP

  == domain 2    score: 30.3 bits;  conditional E-value: 3.2e-11
                 GGEBTTSEEEEEESSEEEEEEH--SHHHHHHHHHHHHHHHH......HHCTSTTEEEEEEEHHHHHHHHH CS
  PF00626.17  13 sslesgdvyLLdtgftiylWiGkgssqeeknfaadlaaeld......seerfplpelirevqgkeparFl 76 
                   l+sgd+++L t +t+y W+G gs+ +ek+ a   a+ l+          +p  e+++  +g+ep+ F+
  MMETSP1325-20131115|2159_1 144 TALNSGDCFVLITPTTMYSWMGVGSNDDEKASASAIAEVLSthsygpPGTAPPSREVVTLAEGEEPDAFW 213
                 579**************************998888888888******9999******************9 PP

  == domain 3    score: 48.2 bits;  conditional E-value: 8.4e-17
                 EEEEEECSSGGGEBTTSEEEEEESSEEEEEEH--SHHHHHHHHHHHHHHHH...HHCTSTTEEEEEEEHHHHHHHH CS
  PF00626.17   3 vlppvvplsqsslesgdvyLLdtgftiylWiGkgssqeeknfaadlaaeld...seerfplpelirevqgkeparF 75 
                 ++ +v  ++q++l ++dvyLLd g+t+y WiGkg++ ee+ +a d+a+ ++   ++ r p  ++i +vq++ep +F
  MMETSP1325-20131115|2159_1 248 TVEEVCSFDQEDLLEDDVYLLDIGTTLYSWIGKGANSEERRMAIDTAKKYNaaaTDGRDPDIPIIEVVQNHEPLMF 323
                 56778889**********************************************9999999999999*****9887 PP

>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.7e-06     0.012       1      19 [.     413     431 ..     413     434 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.7e-06
                 GS-HHHHHHHTSS-HHHHT CS
  PF02209.14   1 YLsdedFeevFgMtkeeFy 19 
                 YLsd dF+e+F+M   ++ 
  MMETSP1325-20131115|2159_1 413 YLSDADFQEAFKMDMAAYT 431
                 9************887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.35s 00:00:01.17 Elapsed: 00:00:00.53
# Mc/sec: 2314.97
//
Query:       MMETSP1325-20131115|2163_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 792.64
//
Query:       MMETSP1325-20131115|2166_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-20   72.0   3.2    6.5e-20   71.8   2.2    1.1  1  PF00112.18 Papain family cysteine protease
     0.0014   17.0   0.5     0.0017   16.8   0.4    1.0  1  PF03051.10 Peptidase C1-like family
  ------ inclusion threshold ------
      0.054   13.2   0.0      0.065   12.9   0.0    1.1  1  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   2.2   1.4e-23   6.5e-20     167     218 ..       2      52 ..       1      54 [. 0.96

  Alignments for each domain:
  == domain 1    score: 71.8 bits;  conditional E-value: 1.4e-23
                 -EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
  PF00112.18 167 nhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                  ha++ivG+gve+g+kyW v+NSW+  wGe+GY+ri rg++ ecgies++++
  MMETSP1325-20131115|2166_1   2 GHAIRIVGWGVEDGVKYWKVANSWNPYWGEDGYFRILRGSD-ECGIESQVYA 52 
                 6**************************************99.*******986 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.4   3.8e-07    0.0017     361     396 ..       3      36 ..       2      43 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.8e-07
  PF03051.10 361 HamvltgvdvdddgkvtkwkvEnsWGedsGekGyfv 396
                 Ha+ ++g  v  ++ v+ wkv nsW    Ge+Gyf 
  MMETSP1325-20131115|2166_1   3 HAIRIVGWGV--EDGVKYWKVANSWNPYWGEDGYFR 36 
                 9999999999..667899****************96 PP

>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.4e-05     0.065      42      73 ..      22      54 ..      18      61 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.4e-05
                SS-SSEEEEEEEEEEESCGGGTE.EEEEEEECH CS
  PF00168.25 42 kntlnPvWnekftfevvaeelae.leleVkded 73
                 n++nP+W e+ +f + + + ++ +e +V+ ++
  MMETSP1325-20131115|2166_1 22 ANSWNPYWGEDGYFRILRGSDECgIESQVYASS 54
                689************666666557999999776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|2165_1  [L=400]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-31  108.9   0.0    2.2e-31  108.4   0.0    1.2  1  PF00534.15 Glycosyl transferases group 1
    7.2e-10   39.0   0.2    1.6e-09   37.9   0.0    1.6  2  PF13692.1  Glycosyl transferases group 1
     0.0004   20.4   0.0     0.0014   18.7   0.0    1.9  2  PF13524.1  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> PF00534.15  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.4   0.0   4.8e-35   2.2e-31      18     171 ..     184     348 ..     176     349 .. 0.97

  Alignments for each domain:
  == domain 1    score: 108.4 bits;  conditional E-value: 4.8e-35
                 EEE---BSTTT-HHHHHHHHHCSTT......GGGEEEEE--........--B-HHHHHHHHHH---EEE-----HHH...HHHHHTTECEEEE--SSB---HHHHHHHH----EEEE-TTBCCGGG-SSG.GGEE-TT-HHHHHHHHHHHHH-HHHHHHHHHHHHH CS
  PF00534.15  18 ilsvgrlekeKgvdllikafallkeq....enpnlklvivG........dgeeekelkklaeelelsdnvifvgevpredleelyrnadifvlpsrsEgfGivllEAmaaglpviasnvggpaeivkdgvtGllvkpkdaealaeaiekllkdeelrerlgenark 171
                 ++s++r+e++K+v l+i+a+a +k++    +  +++l+++G        ++e++ el++lae+l+++d v+f   v++ + ++l+++a +++++ + E+fGiv++EAm+ag pv+a + ggp+e+v+dg +G+l +++ + a+ e ++kl + +e ++ +g++a +
  MMETSP1325-20131115|2165_1 184 FVSLNRFERKKNVGLAIEALAVVKRKlspaQMADVRLIVAGgydtsvteNVEYLRELEALAEALGVRDLVTFKPSVSDAERDSLLQSAVCVIYTPENEHFGIVPIEAMYAGAPVLAAKSGGPLETVADGRSGFLRDNT-PVAFGEVMAKLATAPEVSVTMGKAAHE 348
                 6899*******************999***************************************************************************************************************8.**********************99865 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.3   1.1e+04      53      78 ..      30      56 ..      27      68 .. 0.55
   2 !   37.9   0.0   3.4e-13   1.6e-09       6     133 ..     185     333 ..     183     335 .. 0.75

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 2.3
   PF13692.1 53 pnveflgfv.eelaellasadvglapl 78
                ++++++g   + l  + +++ + l p+
  MMETSP1325-20131115|2165_1 30 SRIRVYGDXaAALDLWARHCTLQLDPY 56
                566666666334555555566655554 PP

  == domain 2    score: 37.9 bits;  conditional E-value: 3.4e-13
   PF13692.1   6 gssgsltndkdleelleealprlrekl.p....dvelviiGkgpd..........elarl.....lepnveflgfv.e.elaellasadvglaplrfgeglplKlleylaaGlPvvasdi.gaeglpeeegvgglvaddpeelaealvrll 133
                 +s+++++  k++   +e al+ +++kl p    dv+l+++G +++          el++l      ++ v+f++ v + e  +ll+sa v+++ +  +e +++  +e++ aG Pv+a +  g+ +   +++ g+l++++p ++ e +++l+
  MMETSP1325-20131115|2165_1 185 VSLNRFERKKNVGLAIE-ALAVVKRKLsPaqmaDVRLIVAGGYDTsvtenveylrELEALaealgVRDLVTFKPSVsDaERDSLLQSA-VCVIYTPENEHFGIVPIEAMYAGAPVLAAKSgGPLETVADGRSGFLRDNTPVAFGEVMAKLA 333
                 56666777777777777.9988888763355559********7766666665333344446445555577799999634777777777.88888889********************9996666666678888888****99999888886 PP

>> PF13524.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0         2   9.1e+03      52      69 ..     119     136 ..     116     139 .. 0.78
   2 !   18.7   0.0     3e-07    0.0014       7      83 ..     279     356 ..     263     362 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 2
   PF13524.1  52 laeklryllanpeereai 69 
                 l+ ++++ l++ ++re+ 
  MMETSP1325-20131115|2165_1 119 LVGAVDHGLRDHDRREQQ 136
                 677889999999999875 PP

  == domain 2    score: 18.7 bits;  conditional E-value: 3e-07
   PF13524.1   7 rsespnlrlfEaaacGtpvvtddtsgleelfepgkeivlfe.dleelaeklryllanpeereaiaeaarervlaehty 83 
                 ++e +  +  Ea+ +G+pv++ ++ g  e   +g++++l + ++  + e +++l   pe    +++aa+e+vl+++  
  MMETSP1325-20131115|2165_1 279 ENEHFGIVPIEAMYAGAPVLAAKSGGPLETVADGRSGFLRDnTPVAFGEVMAKLATAPEVSVTMGKAAHEHVLRNFGT 356
                 557788899******************************99*********************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.55
# Mc/sec: 1742.81
//
Query:       MMETSP1325-20131115|2167_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.002   18.0   0.0     0.0023   17.8   0.0    1.1  1  PF05359.6 Domain of Unknown Function (DUF748)


Domain annotation for each model (and alignments):
>> PF05359.6  Domain of Unknown Function (DUF748)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.7e-07    0.0023      28      75 ..       6      51 ..       3      61 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.7e-07
   PF05359.6 28 ltledlnlslsnlssepeqpadvelsgklnkggplelsGqlnllplas 75
                ++++ l+  l++  s+++qpa+++++g+ ++g+ ++++G++ ++ l++
  MMETSP1325-20131115|2167_1  6 TKISSLSTGLPQT-SAHAQPAPMDVEGAADDGADVRMRGKV-PFELHQ 51
                689999999***9.699***********************9.776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 326.78
//
Query:       MMETSP1325-20131115|2169_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.003   17.5   0.0     0.0051   16.8   0.0    1.3  1  PF00847.15 AP2 domain


Domain annotation for each model (and alignments):
>> PF00847.15  AP2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.8e-07    0.0051      10      52 ..     102     143 ..     100     144 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.8e-07
  PF00847.15  10 kkrgrWvAeirdpsengkrkrfslgkfgt.eeAakaaiaarkkl 52 
                 + +g W A i +p  +g  +++ +g f+  +eAa+a++  +++l
  MMETSP1325-20131115|2169_1 102 P-KGAWSASIEVPAPQG-IRNVFIGFFDDeQEAAEAYDSQAREL 143
                 4.799*******95544.5**********99*******877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 794.09
//
Query:       MMETSP1325-20131115|2162_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-52  177.6   0.1    1.9e-52  177.0   0.1    1.3  1  PF01729.14 Quinolinate phosphoribosyl transferase, C-terminal domain
      3e-16   58.8   0.0    7.5e-16   57.6   0.0    1.7  1  PF02749.11 Quinolinate phosphoribosyl transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF01729.14  Quinolinate phosphoribosyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.0   0.1   2.8e-56   1.9e-52       4     169 .]     151     318 ..     148     318 .. 0.94

  Alignments for each domain:
  == domain 1    score: 177.0 bits;  conditional E-value: 2.8e-56
                 HHHHHHH..HC-----EEE--S------HHHHHHHHH------HTTT----EEE-HHHHHH---HHHHHHHHHHHHTTTS.EEEEESSHHHHHHHHHG--SEEEEES--HHHHHHHHHHHHHHTTTSEEEEE----TTTHHHHHH----EEE---TTTSB----EEEE CS
  PF01729.14   4 atakmve..aakstkvkildTRkttPglrllekyavliGGgdnhrlgLsdavlikdnhiaaagsieeavksarevvdkevkvevevenleeleealeagadiimLDnfsveelkeaveelkelagrvllevSGgvtlenveeyaktgvdvisvgalthsvkalDlslk 169
                 a++++++   a++ + ++++TRkttPg+r++ekya+l+GG+++hrl+Ls +v++kdnh++ agsi  av +a+ ++ +  k+eve+++lee  ea+ agadi+mLDn+++ +lk a++elk++++++++e+SGg+t e+++ey + +vdvis g lt++  +lD+slk
  MMETSP1325-20131115|2162_1 151 AARAAADvgIAHGWHGHVAGTRKTTPGFRIVEKYALLVGGAATHRLDLSHMVMLKDNHVWSAGSIAAAVAKAKVAAGFSSKIEVEARTLEEGFEAAGAGADIVMLDNMEPATLKAAAAELKAAHPHLIVEASGGITFETMHEYFSPHVDVISRGNLTQGYDVLDFSLK 318
                 4444443115666699******************************************************************************************************************************************************97 PP

>> PF02749.11  Quinolinate phosphoribosyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.0   1.1e-19   7.5e-16       2      88 .]      58     146 ..      57     146 .. 0.88

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 1.1e-19
                 ----HHH.HHH-SS-EEEEEEE-SS-EE----HH.HHHHHHHTTTTEEE------..EE----EEEE.-EEEHHHHGGGHHHHHHHHHHH- CS
  PF02749.11   2 gsgDittealipeeqratasliakeegvvaGlev.veevfeqlglevewlvkdGe..rveagevllt.ieGnaralltaERvaLnllqrlS 88 
                 +s Di    ++++e++++a l+ k++gv+aG ++ +++vf++lg++vew  ++ +   v+ g+v++  ++G+ar++l +ER+aLn l r+S
  MMETSP1325-20131115|2162_1  58 PSIDIGG--FVVGEKEEEAYLYGKSAGVLAGKPFxFDAVFDYLGCTVEWRLQERDviDVSGGKVVCAiVRGPARQILLGERTALNTLARAS 146
                 7889999..************************85799**********9887776225778888876269*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.31s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 1762.65
//
Query:       MMETSP1325-20131115|2164_1  [L=1519]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-43  147.0   0.0    4.4e-42  143.8   0.0    2.1  1  PF00176.18 SNF2 family N-terminal domain
    1.9e-13   49.9   0.0    7.6e-13   48.0   0.0    2.0  2  PF00271.26 Helicase conserved C-terminal domain
    9.5e-06   25.4   0.0    2.5e-05   24.0   0.0    1.6  1  PF04851.10 Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> PF00176.18  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.8   0.0   9.6e-46   4.4e-42       1     256 [.     438     856 ..     438     892 .. 0.78

  Alignments for each domain:
  == domain 1    score: 143.8 bits;  conditional E-value: 9.6e-46
                 TTT---HHHHHHHT---..........................................................................---B---------HHHHHHHH.HHHHHHS--...--EEEE--TTTHHHHHHHHHHHSTT--EEE-----HHHHHHHHHHS--------SEEEE-TTHHH....................HTT...TT----E.....................................................................EEEEEETTGGGG--SSSHHHHHHTTSEEEEE--B-----SS-SHHHHHHHHHH-------------.................-TTHHHHHHHHHHHGGGGG-BB--GGGGTTTS--EEEEEEEE---HHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx.......................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................xxxxxxxxxxxxx.....................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00176.18   1 yQkegvawllrreakkl.......................................................................svrggiLademGLGKTlqvialitaeLkemkdrr...qptLvVvPssllqqWlneiekhagalrvvvyhgqtrerskvaesmvsakqlatadvvittYdvlk....................kekkeesllkkve.....................................................................wkrvvlDEahrlknsksklaeallklktkkrlcltGTPiqnnleelyaLlnFlrprpltelrvfekaferp............aeekskeglrrllkllkplllrrtkkdvekglppksehllevrlskeqkelYnkll 256
                 +Q  gv++l+ +  ++l                                                                       +  g+iLa+ mGLGKTlqv+++++  L+   + r    ++++ +P++++ +W +e+ k+  +   + +h    +  k ++  + +k +++  +++++Y+++                                 +                                                                      ++vvlDEah  k+++sk++  ++k++t++r++ltGTP+qnnl e++++++F+rp+ l++++ f++ +  p            + +   ++++ l++l++ ++ r+t++ + + lp k+e  ++vr + +q++l + ++
  MMETSP1325-20131115|2164_1 438 HQEAGVRFLWMQTVESLtqlnksltaevyddetegadgaegmgasddgvadeeikcgsdgaaanvglvcgastssaaggephseidcgEGMGCILAHSMGLGKTLQVVSFVH-TLTTHPAVRahfRKVVILAPKNVVVNWIEEFWKWLRECVALPWHLLDASVPKEERLALLEKIEDEGGILVINYEMYHslvskarrdveahatyekyaA-----------NaaavakaankktgpgmapgaagvkstpplmnkpaavgvsgrkrktpprrvsaetledaklvlevlqdpgPDLVVLDEAHLCKKEDSKVYLEICKIRTQRRIALTGTPMQNNLMEYHTMVSFVRPAYLSKPALFKSLIVDPinrgldadsnphDVAIMRKRAHVLHRLVNAFVDRKTDSILRQFLPFKRESTIYVRQTPIQQKLLKAYF 856
                 8999999999988444444444445555555555555555555555555555555555555566666666666666666666677777778*********************.66663333335578********************88888888887776654333334489*****************999977766666666664440...........0444444445666666666666777777777777777777777777777777777778889999999999999******************************************************************************99999999*******************************************9988444 PP

>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.74   3.4e+03      13      31 ..     595     613 ..     592     624 .. 0.83
   2 !   48.0   0.0   1.7e-16   7.6e-13       6      78 .]    1225    1299 ..    1222    1299 .. 0.96

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.74
                 E-TTS-HHHHHHHHHHHHT CS
  PF00271.26  13 lhgelpqnereeileqfna 31 
                 l+++ p++er++ le+  +
  MMETSP1325-20131115|2164_1 595 LDASVPKEERLALLEKIED 613
                 78999*******9999765 PP

  == domain 2    score: 48.0 bits;  conditional E-value: 1.7e-16
                  ----EEEE-TTS-HHHHHHHHHHHHTTTS..SEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26    6 kgikvailhgelpqnereeileqfnagks..kvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78  
                  kg+ + +++g+ +++er e ++qf+++++   +l++t+++ +Gi+l ++n Vi++d+++++++  Q++ R+ R g
  MMETSP1325-20131115|2164_1 1225 KGLDYHRFDGSSKASERMEAIDQFTESSRakLMLISTKAGNMGINLVAANRVIIMDVSWNPSDDFQALSRCFRLG 1299
                  6888999*********************9999***************************************9975 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   5.4e-09   2.5e-05      29     182 ..     531     755 ..     522     757 .. 0.75

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 5.4e-09
  PF04851.10  29 livmaTGtGKTlvaasliarlar.........kflflvprkelleqaleefkkfeskkiefekkniavakkdklfgeeqkkskdkeekkkkdkeiilttiqklhkaleeeeendesks.....................................................eslealldefd........................viiiDEaHrlsakkk..yreilefkkafllglTATp 182
                 ++++  G GKTl   s++  l +         k+++l+p++ ++  ++eef k   ++++++ + +      +    ++++++   ek +++  i+++++ + h+ ++++ ++ e                                                                  +                        +++ DEaH   ++++  y ei +++++ ++ lT+Tp
  MMETSP1325-20131115|2164_1 531 ILAHSMGLGKTLQVVSFVHTLTThpavrahfrKVVILAPKNVVV-NWIEEFWKWLRECVALPWHLL------DASVPKEERLAL-LEKIEDEGGILVINYEMYHSLVSKARRDVEAHAtyekyaanaaavakaankktgpgmapgaagvkstpplmnkpaavgvsgrkrktP---------PrrvsaetledaklvlevlqdpgpdLVVLDEAHLCKKEDSkvYLEICKIRTQRRIALTGTP 755
                 688999****************9********9999999977665.588888788888888877776......334445555555.567799999999999999999998665553333577777777776666666666666666666666666666665555555555551.........0555555555666688888899999**********999988999999999**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1519 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 2.01u 0.40s 00:00:02.40 Elapsed: 00:00:00.96
# Mc/sec: 3791.74
//
Query:       MMETSP1325-20131115|2171_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 498.44
//
Query:       MMETSP1325-20131115|2172_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-08   33.0   1.4    4.3e-08   32.8   0.9    1.2  1  PF01963.12 TraB family
     0.0014   18.3  15.3        1.1    9.0   0.9    4.3  4  PF02686.10 Glu-tRNAGln amidotransferase C subunit
  ------ inclusion threshold ------
       0.19   11.3   2.9        2.2    7.8   0.1    2.6  3  PF06777.6  Protein of unknown function (DUF1227)
       0.75    8.3   8.8       0.67    8.4   1.1    2.3  2  PF00793.15 DAHP synthetase I family
          8    6.7  10.0    3.1e+02    1.6   8.1    2.5  2  PF03448.12 MgtE intracellular N domain


Domain annotation for each model (and alignments):
>> PF01963.12  TraB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.9   1.6e-11   4.3e-08     180     244 ..      72     137 ..       7     159 .. 0.70

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 1.6e-11
  PF01963.12 180 veawkegdleelmeelaedkaspel.yevlldeRnrywaeklk..ellkgggkvvvVVGagHlpGekg 244
                 ++     d+++++ee +     p++   +l +eR++y+a++lk  ++++g+g v+ VVG +H++G+  
  MMETSP1325-20131115|2172_1  72 ADMTDVADVASILEEQNV--HVPAAaLAALTTERDAYLAWSLKrsKVVNGQGVVLGVVGKAHVAGVMA 137
                 222233344555555555..666554799**************999*******************876 PP

>> PF02686.10  Glu-tRNAGln amidotransferase C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.9    0.0004       1.1      17      41 ..       3      27 ..       1      30 [. 0.86
   2 !    6.9   1.3    0.0018       4.8      15      40 ..      25      50 ..      22      52 .. 0.85
   3 !    7.7   2.4     0.001       2.7      15      40 ..      46      71 ..      42      90 .. 0.86
   4 ?    2.4   0.0     0.046   1.3e+02      31      53 ..     126     148 ..     120     155 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0004
                HHHHHT-------------...... CS
  PF02686.10 17 ldyveqLnevDttgvepmthpldik 41
                 d ++ +n vDtt+v+ mt ++d++
  MMETSP1325-20131115|2172_1  3 ADVADMVNMVDTTDVADMTDVADVA 27
                578999**************98876 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0018
                HHHHHHHT-------------..... CS
  PF02686.10 15 aIldyveqLnevDttgvepmthpldi 40
                ++ d ++ +n vDtt+v+ +t ++d+
  MMETSP1325-20131115|2172_1 25 DVADVADMVNMVDTTDVADTTDVADV 50
                6778999*************999875 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.001
                HHHHHHHT-------------..... CS
  PF02686.10 15 aIldyveqLnevDttgvepmthpldi 40
                ++ d ++ +n vDtt+v+ mt ++d+
  MMETSP1325-20131115|2172_1 46 DVADVADMVNMVDTTDVADMTDVADV 71
                6778999**************99764 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.046
                 -----......---B-S------ CS
  PF02686.10  31 vepmthpldiknrlReDevtesl 53 
                 v   +h++ + ++lReDe  ++l
  MMETSP1325-20131115|2172_1 126 VVGKAHVAGVMAALREDEGGDTL 148
                 556689988999*****976665 PP

>> PF06777.6  Protein of unknown function (DUF1227)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1   0.00082       2.2     112     141 ..       8      37 ..       5      40 .. 0.88
   2 ?    2.4   0.1     0.037     1e+02     117     140 ..      34      57 ..      32      61 .. 0.65
   3 ?    2.7   0.1     0.031        84     120     138 ..      64      82 ..      51      87 .. 0.54

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00082
   PF06777.6 112 LksLlntleltdvedysaLklvaefatlvg 141
                 + +++ t +++d++d++ + +va+++ +v 
  MMETSP1325-20131115|2172_1   8 MVNMVDTTDVADMTDVADVADVADMVNMVD 37 
                 56889999*****************99986 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.037
   PF06777.6 117 ntleltdvedysaLklvaefatlv 140
                 n  + tdv d + + +va+++ +v
  MMETSP1325-20131115|2172_1  34 NMVDTTDVADTTDVADVADMVNMV 57 
                 444556777777777777777777 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.031
   PF06777.6 120 eltdvedysaLklvaefat 138
                 ++tdv d++ +++va+ a+
  MMETSP1325-20131115|2172_1  64 DMTDVADVADMTDVADVAS 82 
                 3455555555566666555 PP

>> PF00793.15  DAHP synthetase I family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   2.0     0.011        30      93     113 ..      14      34 ..       1      58 [. 0.54
   2 ?    8.4   1.1   0.00024      0.67      81     129 ..      47      95 ..      37     100 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.011
                 EEEB-SSSTHHHHHHHBSEEE CS
  PF00793.15  93 atevldtisvqyladvvdilq 113
                  t+v d+ +v  +adv+d++ 
  MMETSP1325-20131115|2172_1  14 TTDVADMTDVADVADVADMVN 34 
                 455555555555555555443 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00024
                 HHHCTHH---EEEEEB-SSSTHHHHHHHBSEEEE--TTTT-HHHHHHH- CS
  PF00793.15  81 lekvkkglglpiatevldtisvqyladvvdilqiGArttesqdlleaas 129
                 +++v++ +++   t+v d+ +v  +ad+ d+  +   + e+ +++ aa+
  MMETSP1325-20131115|2172_1  47 VADVADMVNMVDTTDVADMTDVADVADMTDVADVASILEEQNVHVPAAA 95 
                 4566777788888999999999999999999999999999999988876 PP

>> PF03448.12  MgtE intracellular N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   8.1      0.11   3.1e+02       3      83 ..      14      97 ..       1     112 [. 0.57
   2 ?   -3.4   0.0       4.2   1.1e+04      27      40 ..     129     142 ..     121     148 .. 0.55

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.11
                CCCHHHTCCCS-HHHHHHHHHHS-HHHHHHHHCTS-CCCCCHCCCCS-HHHHHHHHCTS-HHHHHHH...HCCCHCCHHHHHHH CS
  PF03448.12  3 padiaelleeldeeeraallrllpkeeaaevleelsedlqeeliealpdeelaelleeldsDdavdl...leelpeekveells 83
                  d+a++ +  d ++ a +++ +++   a++ +  +     +++++ + ++++++ +  d+ d++d+   lee + ++ ++ l+
  MMETSP1325-20131115|2172_1 14 TTDVADMTDVADVADVADMVNMVDTTDVADTTDVADVADMVNMVDTTDVADMTDVADVADMTDVADVasiLEEQNVHVPAAALA 97
                345666666666666666666666666666666666666666666666666666555555555555533344444444445555 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 4.2
                 HHHHHHHHCTS-CC CS
  PF03448.12  27 keeaaevleelsed 40 
                 k++ a v++ l+ed
  MMETSP1325-20131115|2172_1 129 KAHVAGVMAALRED 142
                 44445555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 827.42
//
Query:       MMETSP1325-20131115|2173_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.6   0.0      0.047   13.7   0.0    1.6  1  PF13499.1  EF-hand domain pair
        0.1   12.4   0.0       0.21   11.4   0.0    1.5  1  PF00745.15 Glutamyl-tRNAGlu reductase, dimerisation domain


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   6.9e-06     0.047       7      35 ..      31      72 ..      24     147 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 6.9e-06
   PF13499.1  7 kllDkdgdgyldkeeLlrllkhlgsels.............d 35
                +++D d+ g+++ + L+ ++++lg +++             +
  MMETSP1325-20131115|2173_1 31 DQFDPDCKGWITLAKLEMFIQNLGKPMRkqkvqfdlkqtilE 72
                679*********************988866665555544441 PP

>> PF00745.15  Glutamyl-tRNAGlu reductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0     3e-05      0.21      20      95 ..      91     169 ..      88     171 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3e-05
  PF00745.15  20 slevvplIralrekaeeireeelekalkkla....lgedpeevleklarsltnkllhaptkalreaaadgdadellealr 95 
                 +l++v++I  + +++  +r+e ++  +  ++     ++++  +l k+a +  nk+l +  ++lr+  ad+  +++l+ l+
  MMETSP1325-20131115|2173_1  91 ELHIVDVIEGIEKHVLLWRKERVDIKMVDPEmtdgDKKKELGALAKMATGRQNKFLEGLEQKLRQPVADPY-QTYLDRLK 169
                 6889*******************98888876533344455556777778888*************999998.88887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.61
# Mc/sec: 1052.83
//
Query:       MMETSP1325-20131115|2175_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.56
# Mc/sec: 894.35
//
Query:       MMETSP1325-20131115|2179_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.076   12.4   0.6       0.11   11.8   0.3    1.4  1  PF06941.7 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)


Domain annotation for each model (and alignments):
>> PF06941.7  5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   8.3e-06      0.11     124     160 ..     108     145 ..     102     178 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 8.3e-06
   PF06941.7 124 enivltkdKtvvraDllidDrpdnlekerarsle.tIl 160
                 +n +++k+K v + Dl i D+ +n+  ++++++  t +
  MMETSP1325-20131115|2179_1 108 HNQCMMKRKSVESIDLQIRDERNNVVDFNNQDWSiTFV 145
                 689*****************************862333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       662  (0.0484201); expected 273.4 (0.02)
Passed bias filter:                      473  (0.0345963); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 1038.42
//
Query:       MMETSP1325-20131115|2180_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 420.49
//
Query:       MMETSP1325-20131115|2170_1  [L=308]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       548  (0.0400819); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.56
# Mc/sec: 1294.87
//
Query:       MMETSP1325-20131115|2182_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.60
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|2176_1  [L=661]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   15.7   2.4       0.65   10.0   0.0    3.0  3  PF13908.1 Wnt and FGF inhibitory regulator


Domain annotation for each model (and alignments):
>> PF13908.1  Wnt and FGF inhibitory regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.3      0.35   4.8e+03     121     145 ..      37      60 ..      34      99 .. 0.55
   2 ?    4.4   0.1    0.0025        34      88     176 ..     412     490 ..     408     507 .. 0.46
   3 ?   10.0   0.0   4.8e-05      0.65      68     110 ..     578     616 ..     561     632 .. 0.75

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.35
   PF13908.1 121 sttvqatplpqeeskapsypqpqsq 145
                 ++t ++tp+ +e+++ ++ p+p ++
  MMETSP1325-20131115|2176_1  37 PSTLNKTPMMAEQAT-ARPPAPPAK 60 
                 677777777777777.333433332 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0025
   PF13908.1  88 vvfivvliviftcskcvlekavrrqrpvvtsassttvqatplpqeesk................apsypqpqsqgyetpppqgaqaaapyslalpepyllqpsgp 176
                 v     +iv+ +c  c +++ +rr++ ++ + + t +++  l++  +                 ++ + +p+ +                   ++ +  +q+++p
  MMETSP1325-20131115|2176_1 412 V----LFIVS-LC-LCTRCA-HRRRTCKMKRVLETLQEHPELKAAVEDaagtvvpqagwkckmvQAINANPELK-------------------AAVEDAAQMQMP 490
                 2....23332.22.334444.78888888888777777766666666533333221111121111111122222...................222333333333 PP

  == domain 3    score: 10.0 bits;  conditional E-value: 4.8e-05
   PF13908.1  68 pvedptkdlkvvlivsiilivvfivvliviftcskcvlekavr 110
                 p  dp+    +  i si+++ +fiv+  ++f c  c+ ++ +r
  MMETSP1325-20131115|2176_1 578 PESDPL----AGFIFSIFFGFLFIVTCSLAFKCLRCFYKRCCR 616
                 344455....55899999999************9999555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       664  (0.0485664); expected 273.4 (0.02)
Passed bias filter:                      415  (0.030354); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.09u 0.33s 00:00:01.42 Elapsed: 00:00:00.74
# Mc/sec: 2140.53
//
Query:       MMETSP1325-20131115|2183_1  [L=378]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.68u 0.35s 00:00:01.03 Elapsed: 00:00:00.52
# Mc/sec: 1741.97
//
Query:       MMETSP1325-20131115|2186_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0037   17.3   0.1     0.0051   16.8   0.1    1.2  1  PF10615.4 Protein of unknown function (DUF2470)
  ------ inclusion threshold ------
       0.14   12.1   0.5        2.3    8.1   0.4    2.0  2  PF09551.5 Stage II sporulation protein R (spore_II_R)


Domain annotation for each model (and alignments):
>> PF10615.4  Protein of unknown function (DUF2470)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   7.5e-07    0.0051      17      60 ..      20      70 ..      13      87 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 7.5e-07
   PF10615.4 17 MNeDHadalalyaqhyggvska..esarmtdidleglelev.....gdkkt 60
                +N DH   la++a    + + a  e+++++++ ++++el+v     ++++ 
  MMETSP1325-20131115|2186_1 20 LNHDHIAELARIAAYQSNTKLAsiEQVHVHEVAEDHVELQViscgeEEEQC 70
                7*************9888844466*****************8875334444 PP

>> PF09551.5  Stage II sporulation protein R (spore_II_R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.4   0.00033       2.3      18      68 ..       8      58 ..       6      69 .. 0.91
   2 ?    2.1   0.0     0.024   1.6e+02      41      73 ..      86     118 ..      78     120 .] 0.86

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00033
   PF09551.5 18 edqelKlkvrdevleelkekleelksieeakkvikeelkeieeiaekvike 68
                 dq+l lk  d++++   ++l++++  ++  k+ + e+ +++e+ae+ ++ 
  MMETSP1325-20131115|2186_1  8 MDQNLHLKTEDDLNHDHIAELARIAAYQSNTKLASIEQVHVHEVAEDHVEL 58
                7*********************************99999*****9998875 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.024
   PF09551.5  41 lksieeakkvikeelkeieeiaekvikeegvdy 73 
                 +++ e+ ++++ +++ e++++ +++ +ee++d 
  MMETSP1325-20131115|2186_1  86 FDNEEDFEECVLNNIAELSAMFNEAAEEEEYDA 118
                 6778899999**************999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       477  (0.0348888); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.60
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|2185_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   11.3   0.1      0.066   11.1   0.1    1.1  1  PF03170.8 Bacterial cellulose synthase subunit


Domain annotation for each model (and alignments):
>> PF03170.8  Bacterial cellulose synthase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   4.8e-06     0.066     244     297 ..      30      78 ..       5      84 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.8e-06
   PF03170.8 244 dpegklLlVaGrtpedLrkAakaLalgnaalagasvlvtrvkalaprkpydapa 297
                  ++gk+L V   ++++L +A+++ a+ +a+ +++s++vt+ k+ +prkp++a  
  MMETSP1325-20131115|2185_1  30 GRGGKRLAV---DEAALAEASQTVAS-DASTVSESSAVTK-KSSKPRKPPPAKE 78 
                 567899999...************85.5566666666666.699******9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 679.78
//
Query:       MMETSP1325-20131115|2187_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-11   42.2   1.3    1.4e-10   40.6   0.9    1.8  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.9     1e-14   1.4e-10       4      31 .]      70      97 ..      68      97 .. 0.93

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 1e-14
                S.EEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  4 g.WeersddddGrvYYyNheTgetqWekP 31
                g W e++dd+ G vYY N+ Tget+W+kP
  MMETSP1325-20131115|2187_1 70 GdWIEAWDDQ-GNVYYMNQVTGETSWDKP 97
                66**99*999.*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       641  (0.0468841); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.63
# Mc/sec: 684.67
//
Query:       MMETSP1325-20131115|2184_1  [L=457]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.5    8.6   5.0         24    4.7   0.0    2.5  2  PF01927.11 Protein of unknown function DUF82


Domain annotation for each model (and alignments):
>> PF01927.11  Protein of unknown function DUF82
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0    0.0017        24     100     130 ..     150     180 ..      95     184 .. 0.89
   2 ?    4.1   1.5    0.0027        37      92     135 ..     402     453 ..     392     456 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0017
  PF01927.11 100 eleevskeevkervpekvyeeadeftrCtkC 130
                  l+ +  e v+ +++e  ye++d++ +C+ C
  MMETSP1325-20131115|2184_1 150 ALRAAADEAVAIELNEAEYEKHDQLITCECC 180
                 488888999999*****************99 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0027
  PF01927.11  92 srCvkCng......eleevskeevkervpekvyeeade..ftrCtkCrkvyW 135
                  rC +C+g        + v +e  ++ + ++v ++  +  + +C++C+  + 
  MMETSP1325-20131115|2184_1 402 LRCARCDGeahtgpCFADVPEEATEDGLRKYVEQQMAAalVRTCPNCNTHFH 453
                 6999999966666556788999999999999999888888999****99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       592  (0.0433002); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.80u 0.35s 00:00:01.14 Elapsed: 00:00:00.74
# Mc/sec: 1479.91
//
Query:       MMETSP1325-20131115|2188_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-18   64.9   0.0    7.1e-18   64.3   0.0    1.2  1  PF08837.6  Protein of unknown function (DUF1810)
     0.0056   15.9   1.7     0.0054   16.0   1.2    1.1  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF08837.6  Protein of unknown function (DUF1810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   0.0     1e-21   7.1e-18       4     113 ..       1     121 [.       1     139 [. 0.84

  Alignments for each domain:
  == domain 1    score: 64.3 bits;  conditional E-value: 1e-21
   PF08837.6   4 fdLerFveaqekvyetalaelkaGkkrshwmwfvfPq....laglgk.setakryaiesleearaYlahp....vLgkrlrectelllav..egksaeeilgepdalKlrssmtLFaavad 113
                 ++L+r+ + q+++ye+a++e++aG+k+s+wmwfv P     ++g+ + s+  +r ai+  e+a+aYl+++     L++ ++e+ +++ +   +g+++++++g  d+ Kl ss+  F+ ++ 
  MMETSP1325-20131115|2188_1   1 HNLRRYTSKQATLYEDAISEIHAGHKSSCWMWFVIPTppwiVNGVERgSALNQRMAIRTDEQAAAYLTFEadgvCLRSNYIEIMRAIRDQlkSGNTVRRLMGGADEPKLASSVEYFKMITA 121
                 69*********************************976666899976478899**************99833435899999999999874226799********************99875 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.2   7.9e-07    0.0054     239     331 ..     171     250 ..      41     269 .. 0.63

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 7.9e-07
                 XXXXXXXXXXXXXXXXXXXXXXXX....................................................XXXXXXXXXXXHHHHHH CS
  PF04652.11 239 gvpsfpspdeseasnkdsqlPsaPtyaqknssssqsvfPpsseeeetssssppsteapssppvqapsapakpslssakPtaqsassaqaqplq 331
                  +++     + + s++ s+++sa  ++ ++ss+s+s+ P +s+ ++ts+ + + +++p++++++ +         +++P a++ ++ + q++ 
  MMETSP1325-20131115|2188_1 171 LFAN-----HRSVSSTGSSSSSAS-ASASASSNSNSNSPATSKLRRTSMGPISTFFKPQNASTSPKR-------RQSAPDAPEPPRRTYQEVH 250
                 3333.....333333322222222.335577899999999999999999999999999999985544.......3444454444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1362.93
//
Query:       MMETSP1325-20131115|2190_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|2189_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-11   43.9  36.9    3.2e-07   29.3  10.3    1.8  2  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.057   12.5   0.0      0.093   11.7   0.0    1.3  1  PF02404.10 Stem cell factor
       0.15   11.5   2.7       0.12   11.8   0.5    1.9  2  PF06781.7  Uncharacterised protein family (UPF0233)


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3  10.3     7e-11   3.2e-07     155     354 .]       3     199 ..       1     199 [. 0.70
   2 !   27.9   9.8   1.8e-10   8.3e-07       5     156 ..      66     215 ..      61     263 .. 0.79

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 7e-11
  PF07690.11 155 Flilailsllaavlvllllprepperkrkspaeel...rkepaplvpawklllkppvl.willialllfffvfsglltllplylqevlglsp...glllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalglallaftssavwlllvlvliGfglglvfptllalasdlappeerGtasglfntagslggalgp 354
                 + ++a l++l++ +++++l ++ + ++ +  +         +a + + +++l ++  l w+++++++l++    g+ ++l+ +l +++g+++   g + +g+++  +++ +   ++   +++ r+     l+ +l+++ +++l++a++       w++++++++G   + + ++l a++++++ +  +G+++gl+  +++++ ++gp
  MMETSP1325-20131115|2189_1   3 MALVASLYALSGAFIYVYLEETLKVKPVPITWGAIlssCNLKATMDS-FSELEHSSKLqWLAVVMCILVT-SGVGFCMTLFYWLEDQFGMNTadyG-VVLGIIIVSSGMTF---SISNNYWTIRYAEDDVLMGCLAGTGFLMLIMAFVRE----RWQVYLIACFGGVGSNTIVLLRAIITRSVAATVQGRVQGLMYCLQCVAFVVGP 199
                 56788899999999888888888888888888884555444444444.8888888888784444444444.4444555555558*******88888.55554455555555...333344444444444555555555555555555555....5***********99999**********************************98 PP

  == domain 2    score: 27.9 bits;  conditional E-value: 1.8e-10
  PF07690.11   5 aflaalarsilgpalplalaedlgispseigwlltlyslgyaiaslla.GrlsdrfGrrrvlllglllfalglllllfasslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslgWravFl 156
                 +++  ++   + ++l ++l +++g++ + +g +l++  + ++ +  +   +++ r+    vl+ +l+++++ +l+++f+   w  +++  ++ G+g +  + +  a+i++ ++ + +gr+ gl++    +++++gp++  ++ +++  +++F+
  MMETSP1325-20131115|2189_1  66 MCILVTSGVGFCMTLFYWLEDQFGMNTADYGVVLGIIIVSSGMTFSISnNYWTIRYAEDDVLMGCLAGTGFLMLIMAFVRERW-QVYLIACFGGVG-SNTIVLLRAIITRSVAATVQGRVQGLMYCLQCVAFVVGPVIYTYVFEYGE-ESSFI 215
                 3333333333444444489999**************9998876666666*******7777************88888974445.799999999**9.799**************************************999995544.44444 PP

>> PF02404.10  Stem cell factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     2e-05     0.093     206     241 ..      52      87 ..      22      98 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2e-05
  PF02404.10 206 dsiedsslqgiaialtallslligfilgalywkkkq 241
                 +  ++s lq+ a+ +  l++  +gf +  +yw   q
  MMETSP1325-20131115|2189_1  52 ELEHSSKLQWLAVVMCILVTSGVGFCMTLFYWLEDQ 87 
                 4456899*************************8876 PP

>> PF06781.7  Uncharacterised protein family (UPF0233)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.5   2.7e-05      0.12      23      83 ..      52     109 ..      40     112 .. 0.79
   2 ?   -3.4   0.0       1.5   6.7e+03      31      51 ..     186     206 ..     173     217 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.7e-05
   PF06781.7  23 kvkakpspvwfvalmvalmllGllwlvv.fylseeeilpiadlgaWNlligfgllivGlllt 83 
                 + +++++ +w++++m+ l+  G+ ++++ fy  e++ ++++      + + +g++iv+  +t
  MMETSP1325-20131115|2189_1  52 ELEHSSKLQWLAVVMCILVTSGVGFCMTlFYWLEDQ-FGMNT---ADYGVVLGIIIVSSGMT 109
                 555677889****************98537888888.67665...56889999999998888 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 1.5
   PF06781.7  31 vwfvalmvalmllGllwlvvf 51 
                   +    va+++  +++  vf
  MMETSP1325-20131115|2189_1 186 LMYCLQCVAFVVGPVIYTYVF 206
                 445555556655556666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       539  (0.0394236); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.34s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 1377.91
//
Query:       MMETSP1325-20131115|2192_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-22   78.4   0.1    2.8e-11   43.2   0.3    2.2  2  PF13921.1  Myb-like DNA-binding domain
    3.3e-21   74.9   0.5    2.5e-12   46.5   0.0    2.3  2  PF00249.26 Myb-like DNA-binding domain
    4.7e-05   23.3   1.3      0.077   13.0   0.3    2.4  2  PF13837.1  Myb/SANT-like DNA-binding domain
  ------ inclusion threshold ------
      0.017   15.1   2.8       0.33   11.0   0.3    2.3  2  PF10545.4  Alcohol dehydrogenase transcription factor Myb/SANT-like
      0.033   13.8   0.1        8.2    6.0   0.0    2.0  2  PF09548.5  Stage III sporulation protein AB (spore_III_AB)
       0.27   11.0   9.0        8.5    6.1   2.6    3.5  2  PF13873.1  Myb/SANT-like DNA-binding domain
       0.55    9.7   2.6        1.7    8.2   0.0    2.7  3  PF12472.3  Phage related protein


Domain annotation for each model (and alignments):
>> PF13921.1  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.0   2.7e-13   5.2e-10       1      60 []      11      76 ..      11      76 .. 0.86
   2 !   43.2   0.3   1.4e-14   2.8e-11       1      51 [.      68     118 ..      68     126 .. 0.88

  Alignments for each domain:
  == domain 1    score: 39.1 bits;  conditional E-value: 2.7e-13
   PF13921.1  1 WtdeEdeiL.lklveey..gn...dWseIaeelgrRtplacqdrwknkLrpkisrapwtkeedqkL 60
                W++ E++ L l +v  +  g+   +W+++a+   +R p+ c+++w ++L+p ++++p+++ee+++L
  MMETSP1325-20131115|2192_1 11 WDAMEERQLyLGVVAMHpgGDelpNWKDVARVVPHRNPTKCREKWVDSLDPELNKGPFSAEETERL 76
                8888999995566666664337889********88****************************998 PP

  == domain 2    score: 43.2 bits;  conditional E-value: 1.4e-14
   PF13921.1   1 WtdeEdeiLlklveeygn.dWseIaeelgrRtplacqdrwknkLrpkisrap 51 
                 +++eE+e+L++lve+yg  +W++Ia+e+ +R    c++ w++ L  ki++++
  MMETSP1325-20131115|2192_1  68 FSAEETERLKQLVEKYGAgKWASIAKEMPNRNDMTCRQAWES-LLRKINKSK 118
                 689*************9559********66************.888877765 PP

>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.7e-09   3.3e-06       1      45 [.       8      56 ..       8      59 .. 0.89
   2 !   46.5   0.0   1.3e-15   2.5e-12       1      47 [.      65     110 ..      65     111 .. 0.94

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 1.7e-09
                TTSS-HHHHHHHHHHH.HHTTS-.....HHHHHHHCTTTS-HHHHHHHHH CS
  PF00249.26  1 rgrWTteEdellvdav.kqlGgg....tWktIartmgkgRtlkqcksrwq 45
                rg W + E+ +l+ +v ++++gg    +Wk +ar ++ +R +  c+++w 
  MMETSP1325-20131115|2192_1  8 RGQWDAMEERQLYLGVvAMHPGGdelpNWKDVARVVP-HRNPTKCREKWV 56
                899*********98752777777**************.***********5 PP

  == domain 2    score: 46.5 bits;  conditional E-value: 1.3e-15
                 TTSS-HHHHHHHHHHHHHTTS-.HHHHHHHCTTTS-HHHHHHHHHHH CS
  PF00249.26   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                 +g++++eE e+l+++v+++G g W++Ia++m+ +R +  c+  w ++
  MMETSP1325-20131115|2192_1  65 KGPFSAEETERLKQLVEKYGAGKWASIAKEMP-NRNDMTCRQAWESL 110
                 79******************************.********988765 PP

>> PF13837.1  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00071       1.4      37      60 ..      36      55 ..       8      60 .. 0.85
   2 !   13.0   0.3   3.9e-05     0.077      29      72 ..      80     119 ..      67     127 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00071
                HHHHHHHHHH------HHHHHHHH CS
   PF13837.1 37 WeevaeamaergykrspkqCkdKw 60
                W++va+ +     +r+p++C++Kw
  MMETSP1325-20131115|2192_1 36 WKDVARVV----PHRNPTKCREKW 55
                67776666....79999******* PP

  == domain 2    score: 13.0 bits;  conditional E-value: 3.9e-05
                 .SS--HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHS-- CS
   PF13837.1  29 gkkknkelWeevaeamaergykrspkqCkdKwenLkkrYkkeke 72 
                  +k ++ +W ++a++m     +r++  C++ we+L ++ +k k+
  MMETSP1325-20131115|2192_1  80 VEKYGAGKWASIAKEM----PNRNDMTCRQAWESLLRKINKSKK 119
                 45666778********....578899*************99997 PP

>> PF10545.4  Alcohol dehydrogenase transcription factor Myb/SANT-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.018        36      29      49 ..      36      55 ..      31      85 .. 0.85
   2 ?   11.0   0.3   0.00017      0.33      28      58 ..      87     116 ..      77     127 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.018
   PF10545.4 29 waeiaeelgeklpeedckkkw 49
                w+ +a+ ++ + + ++c++kw
  MMETSP1325-20131115|2192_1 36 WKDVARVVP-HRNPTKCREKW 55
                999999998.56667899999 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00017
   PF10545.4  28 awaeiaeelgeklpeedckkkwknLRdqyrr 58 
                 +wa+ia+e++ + +  +c++ w++L  + ++
  MMETSP1325-20131115|2192_1  87 KWASIAKEMP-NRNDMTCRQAWESLLRKINK 116
                 7********8.566779*******9766555 PP

>> PF09548.5  Stage III sporulation protein AB (spore_III_AB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0042       8.2      75     118 ..      41      84 ..      36      88 .. 0.86
   2 ?    5.9   0.1    0.0045       8.9      72     104 ..      90     124 ..      86     128 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0042
   PF09548.5  75 erlekeegetvaeaweealeellketaLkkedieiLlelgksLG 118
                 + +  ++ ++ +e w ++l+ +l++  ++ e++e L++l ++ G
  MMETSP1325-20131115|2192_1  41 RVVPHRNPTKCREKWVDSLDPELNKGPFSAEETERLKQLVEKYG 84 
                 555566668999****************************9988 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0045
   PF09548.5  72 kvaerlekeegetvaeaweealeell..ketaLkk 104
                 ++a+++ +++ +t ++awe  l++    k++aLk+
  MMETSP1325-20131115|2192_1  90 SIAKEMPNRNDMTCRQAWESLLRKINksKKLALKE 124
                 68899999999***********9877224555554 PP

>> PF13873.1  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1      0.02        40      44      67 ..      39      57 ..      35      60 .. 0.76
   2 ?    6.1   2.6    0.0044       8.5       5      52 ..      68     118 ..      64     127 .. 0.52

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.02
   PF13873.1 44 iaeevnalgptqRtadelkkkWed 67
                +a+ v     ++R+  ++++kW d
  MMETSP1325-20131115|2192_1 39 VARVV-----PHRNPTKCREKWVD 57
                44444.....79**********76 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0044
   PF13873.1   5 fteeEkevLvelvekrk..eilegkksdaatkraK.rraWeeiaeevnalg 52 
                 f+ eE+e L +lvek+   + +   k  +  ++   r+aWe++++++n+  
  MMETSP1325-20131115|2192_1  68 FSAEETERLKQLVEKYGagKWASIAKEMPNRNDMTcRQAWESLLRKINKSK 118
                 666777777777766641122322233333333333666666666666644 PP

>> PF12472.3  Phage related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.32   6.2e+02      31      42 ..      18      29 ..      13      30 .. 0.85
   2 ?   -1.2   0.2      0.74   1.4e+03      18      23 ..      88      93 ..      87      94 .. 0.91
   3 ?    8.2   0.0   0.00085       1.7      15      27 ..     104     116 ..      99     118 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.32
   PF12472.3 31 vLllgvgmacpg 42
                +L lgv++++pg
  MMETSP1325-20131115|2192_1 18 QLYLGVVAMHPG 29
                4899******98 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.74
   PF12472.3 18 WesIak 23
                W+sIak
  MMETSP1325-20131115|2192_1 88 WASIAK 93
                ****98 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.00085
   PF12472.3  15 kalWesIakkLna 27 
                 +++Wes++ k+n+
  MMETSP1325-20131115|2192_1 104 RQAWESLLRKINK 116
                 99*********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 583.26
//
Query:       MMETSP1325-20131115|2191_1  [L=335]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-44  151.4   0.1    2.5e-44  150.6   0.0    1.3  1  PF08719.6  Domain of unknown function (DUF1768)
    3.6e-08   32.8   0.6    3.6e-08   32.8   0.4    2.1  2  PF13414.1  TPR repeat
    1.7e-06   27.3   6.2     0.0079   15.9   0.6    3.6  3  PF07719.12 Tetratricopeptide repeat
    0.00046   19.8   4.2    0.00091   18.9   2.9    1.5  1  PF13371.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.015   15.1   6.0       0.15   11.8   0.3    2.6  3  PF13424.1  Tetratricopeptide repeat
      0.027   14.9   3.2      0.027   14.9   2.2    3.9  4  PF13428.1  Tetratricopeptide repeat
       0.04   13.4   0.0         14    5.4   0.0    2.8  2  PF00515.23 Tetratricopeptide repeat
        3.4    7.6  11.2         11    6.0   0.5    2.5  2  PF14346.1  Domain of unknown function (DUF4398)


Domain annotation for each model (and alignments):
>> PF08719.6  Domain of unknown function (DUF1768)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.6   0.0   1.5e-47   2.5e-44       2     156 ..     164     317 ..     163     318 .. 0.93

  Alignments for each domain:
  == domain 1    score: 150.6 bits;  conditional E-value: 1.5e-47
   PF08719.6   2 yFyraeeeygilSnlypspftvd.gvkfptaehymqaqKallfedeeaaakilaaespkeakklgrkvpnfdearkdWekvkeevvvegllakfeqneelrelLlsTgdrelveaspsDrvWGiglnaesa...ildeenwrGkNlLGkalmevReelr 156
                 yFy    ++++ S+++ps f  + g  +++aeh+m++qKa+lf d e+a+ki+a+++p e+k+lgrkv++fd  +  W+++ ++vv +g+l kf+q+++lr+ Ll+Tgd +l ea ++D +WGig+n+++a           G+NlLG+alm+vR+elr
  MMETSP1325-20131115|2191_1 164 YFYA---SKHWGSQWHPSVFCSEeGLVYSCAEHWMMHQKAVLFGDVEIAKKIMATTDPGEQKRLGRKVRGFDVGV--WNQHCRDVVFRGNLLKFSQHKKLRQQLLATGDLVLAEAAKNDPIWGIGMNETEArrlPMGAALEYGQNLLGEALMRVRAELR 317
                 7888...89999********8863678************************************************..**************************************************888887634445578***************98 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.4   2.1e-11   3.6e-08       3      66 ..      18      80 ..      16      83 .. 0.93
   2 ?   -0.7   0.1      0.59     1e+03       9      29 ..      94     114 ..      90     126 .. 0.76

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 2.1e-11
   PF13414.1  3 AealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66
                 +a+ +++++l ++g+++eA+ + e A el p+ ++ +++++ ++ +l  ++eeA+e++++A e
  MMETSP1325-20131115|2191_1 18 VKAHARAAERLARLGEWEEALVQAEAACELHPEWPIGWARRGGILVELE-RREEAREALSRANE 80
                57999*******************************************7.78********9965 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.59
   PF13414.1   9 lGnalfkegdydeAieayekA 29 
                 ++ +++++++  eA++  + A
  MMETSP1325-20131115|2191_1  94 RARQAIELRNISEALKRANAA 114
                 677778888888888777666 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.6   4.6e-06    0.0079       2      33 ..      19      50 ..      18      51 .. 0.94
   2 !   11.6   0.0   0.00011      0.19       2      30 ..      53      81 ..      52      82 .. 0.91
   3 ?   -0.0   0.1      0.56   9.7e+02       7      23 ..      94     110 ..      92     117 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 4.6e-06
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldPn 33
                +a+ + ++ +++lg++eeAl   e A el P+
  MMETSP1325-20131115|2191_1 19 KAHARAAERLARLGEWEEALVQAEAACELHPE 50
                79999*************************97 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00011
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAlel 30
                 ++ ++G ++ +l + eeA+ea+ +A el
  MMETSP1325-20131115|2191_1 53 IGWARRGGILVELERREEAREALSRANEL 81
                689**********************9766 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 0.56
                 HHHHHHHTT-HHHHHHH CS
  PF07719.12   7 lGlayyklgdyeeAlea 23 
                 +++ +++l++  eAl+ 
  MMETSP1325-20131115|2191_1  94 RARQAIELRNISEALKR 110
                 77888899999999985 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   2.9   5.3e-07   0.00091       4      61 ..      27      88 ..      24     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 5.3e-07
   PF13371.1  4 iylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcp....d 61
                +++r +++e+AL  +e  ++l+P+ p  +  rG +l++l++ ++A+e+L+++ el       
  MMETSP1325-20131115|2191_1 27 RLARLGEWEEALVQAEAACELHPEWPIGWARRGGILVELERREEAREALSRANELTLswpwP 88
                789999********************************************997665455451 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.0   0.00013      0.23       7      75 ..      20      81 ..      14      84 .. 0.85
   2 ?   11.8   0.3   8.9e-05      0.15      10      69 ..      57     118 ..      48     123 .. 0.87
   3 ?    1.4   0.1      0.16   2.7e+02      17      50 ..     100     134 ..      87     138 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00013
   PF13424.1  7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75
                ++ + a+ l rlg+++eAl    +a + +    + hp++   +   + ++++l++ +eA+e l +A e+
  MMETSP1325-20131115|2191_1 20 AHARAAERLARLGEWEEAL---VQAEAAC----ELHPEWPIGWARRGGILVELERREEAREALSRANEL 81
                67789999***********...5555555....45899999999*********************9887 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 8.9e-05
   PF13424.1  10 nlalvlrrlgdydeAlelyekalel.lr.elgddhpdtaralnnlanlylalgdydeAleyl 69 
                 + +++l +l++ +eA+e + +a el l+   +d++  +ar   +l n+ +al++  +A +  
  MMETSP1325-20131115|2191_1  57 RRGGILVELERREEAREALSRANELtLSwPWPDTDQARARQAIELRNISEALKRANAASAVA 118
                 679999*******************8884479999999999**********99999997766 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.16
   PF13424.1  17 rlgdydeAlelyekalellrelgd..dhpdtaraln 50 
                 +l++  eAl+  + a ++++++    +h++ a+++n
  MMETSP1325-20131115|2191_1 100 ELRNISEALKRANAASAVAEVVAAplAHLE-ATTMN 134
                 688899999999999999777633347777.88887 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   2.2   1.6e-05     0.027       2      40 ..      19      57 ..      18      59 .. 0.90
   2 ?    6.9   1.3    0.0061        10       3      39 ..      54      95 ..      52      99 .. 0.72
   3 ?    1.3   0.5      0.39   6.7e+02       5      29 ..      92     116 ..      88     127 .. 0.84
   4 ?   -2.2   0.1       5.2   8.9e+03       9      22 ..     260     273 ..     254     275 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.6e-05
   PF13428.1  2 eallalarallalGdpdeAiallrralalaPddaealll 40
                +a+++ a+ l++lG+++eA+ ++++a++l+P+ +  + +
  MMETSP1325-20131115|2191_1 19 KAHARAAERLARLGEWEEALVQAEAACELHPEWPIGWAR 57
                689999*************************98887766 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0061
   PF13428.1  3 allalarallalGdpdeAiallrralala.....Pddaeall 39
                 +++++ +l +l++ +eA+++l ra +l      Pd ++a+ 
  MMETSP1325-20131115|2191_1 54 GWARRGGILVELERREEAREALSRANELTlswpwPDTDQARA 95
                5999********************944321132255555555 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.39
   PF13428.1   5 lalarallalGdpdeAiallrrala 29 
                 +a+ar  ++l +  eA++ +++a a
  MMETSP1325-20131115|2191_1  92 QARARQAIELRNISEALKRANAASA 116
                 5789999999999999999999854 PP

  == domain 4    score: -2.2 bits;  conditional E-value: 5.2
   PF13428.1   9 rallalGdpdeAia 22 
                 + lla Gd+  A+a
  MMETSP1325-20131115|2191_1 260 QQLLATGDLVLAEA 273
                 67888888877776 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.011        19      12      33 ..      29      50 ..      28      50 .. 0.90
   2 ?    5.4   0.0    0.0079        14       3      27 ..      54      78 ..      52      79 .. 0.94

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.011
                HHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23 12 lklgkydeAleyyekALelnPn 33
                 +lg+++eAl   e A el P+
  MMETSP1325-20131115|2191_1 29 ARLGEWEEALVQAEAACELHPE 50
                579***************9995 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0079
                HHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF00515.23  3 alynlGnaylklgkydeAleyyekA 27
                 + ++G ++ +l++ +eA e+ ++A
  MMETSP1325-20131115|2191_1 54 GWARRGGILVELERREEAREALSRA 78
                699*******************998 PP

>> PF14346.1  Domain of unknown function (DUF4398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.5    0.0062        11      68      97 ..      15      44 ..      12      49 .. 0.87
   2 ?    5.4   2.8    0.0099        17      17      65 ..      66     124 ..      62     134 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0062
   PF14346.1 68 aeqAeadaelAeakaeaakaqaalaeaeds 97
                 eq++a+a++Ae++a+  + ++al++ae++
  MMETSP1325-20131115|2191_1 15 MEQVKAHARAAERLARLGEWEEALVQAEAA 44
                6999************99999999999875 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0099
   PF14346.1  17 eeleeAeaalerAeaa.......gaek.ya..pveLeeAkekLaaAkaalaegkyeeAr 65 
                 e+ eeA++al+rA +        + ++ +a  + eL++  e+L++A+aa a ++   A 
  MMETSP1325-20131115|2191_1  66 ERREEAREALSRANELtlswpwpDTDQaRArqAIELRNISEALKRANAASAVAEVVAAP 124
                 7889999999999999999998855555332155************9999988877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 1605.56
//
Query:       MMETSP1325-20131115|2193_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-17   60.9  10.5    2.3e-08   33.3   0.6    3.6  4  PF12799.2  Leucine Rich repeats (2 copies)
      2e-14   52.9   7.4    1.3e-07   31.0   0.7    2.5  2  PF13855.1  Leucine rich repeat
    1.3e-09   36.9  11.9       0.34   11.0   0.1    5.6  6  PF13516.1  Leucine Rich repeat
    4.3e-09   35.0  12.8       0.49   10.5   0.1    5.7  5  PF00560.28 Leucine Rich Repeat
    1.3e-07   30.5  14.2       0.31   11.2   0.1    5.9  6  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
       0.28   11.6   4.7         27    5.3   0.0    4.0  4  PF07723.8  Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.6     1e-11   2.3e-08       1      43 [.      43      84 ..      43      86 .. 0.97
   2 !    7.6   0.1    0.0011       2.5      26      38 ..      88     100 ..      84     107 .. 0.81
   3 !   25.0   0.1   3.9e-09   8.9e-06       1      34 [.     111     147 ..     111     148 .. 0.88
   4 ?   -3.7   0.0         4   9.2e+03      31      39 ..     169     177 ..     166     179 .. 0.59

  Alignments for each domain:
  == domain 1    score: 33.3 bits;  conditional E-value: 1e-11
   PF12799.2  1 tnLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43
                +nL++L+Ls+N+  +l+  + ++  L++LnL+ N+i++l+ L+
  MMETSP1325-20131115|2193_1 43 PNLQTLSLSHNKFASLER-FDQFGALTELNLNFNRICSLDGLQ 84
                8*****************.********************9985 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0011
   PF12799.2  26 LktLnLsnNpisd 38 
                 L  L+LsnN++sd
  MMETSP1325-20131115|2193_1  88 LAKLYLSNNRLSD 100
                 7788899998887 PP

  == domain 3    score: 25.0 bits;  conditional E-value: 3.9e-09
   PF12799.2   1 tnLevLdLsnNnIkdlppe...lanLpnLktLnLsnN 34 
                 ++L++L L +N ++dl+     + +Lp+L++L+L++N
  MMETSP1325-20131115|2193_1 111 PKLHTLCLYRNMLSDLSDAlacVRQLPKLRELDLDGN 147
                 79***************8734456************9 PP

  == domain 4    score: -3.7 bits;  conditional E-value: 4
   PF12799.2  31 LsnNpisdl 39 
                 L++ p+sdl
  MMETSP1325-20131115|2193_1 169 LDGEPVSDL 177
                 555666665 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.7   5.9e-11   1.3e-07       6      61 .]      24      77 ..      21      77 .. 0.93
   2 !   25.2   0.5   3.9e-09     9e-06       1      59 [.      86     147 ..      86     148 .. 0.85

  Alignments for each domain:
  == domain 1    score: 31.0 bits;  conditional E-value: 5.9e-11
   PF13855.1  6 LdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                L L++ +l+  + ga ++l+nL++L+Ls+n+  s+++  f+++ +L+eLnL  Nr+
  MMETSP1325-20131115|2193_1 24 LLLRGLDLTAFERGAAERLPNLQTLSLSHNKFASLER--FDQFGALTELNLNFNRI 77
                778888899999***********************99..***************98 PP

  == domain 2    score: 25.2 bits;  conditional E-value: 3.9e-09
   PF13855.1   1 pnLkeLdLsnNrlkvi.pdgaFkglsnLkvLdLsgnnlksispe..afkgLpsLreLnLsgN 59 
                 p L +L+LsnNrl++    g+  + ++L++L L +n l+ +s+   +  +Lp+LreL+L+gN
  MMETSP1325-20131115|2193_1  86 PLLAKLYLSNNRLSDGaLMGFSRRFPKLHTLCLYRNMLSDLSDAlaCVRQLPKLRELDLDGN 147
                 6799*******88855144666677****************995337**************9 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.1   0.00015      0.34       1      14 [.      42      55 ..      42      59 .. 0.90
   2 !    9.0   0.3   0.00062       1.4       4      20 ..      67      84 ..      64      85 .. 0.82
   3 !    7.9   0.1    0.0014       3.3       6      23 ..      90     107 ..      85     108 .. 0.83
   4 !    7.3   0.0    0.0022         5       2      17 ..     111     126 ..     110     132 .. 0.85
   5 !    5.5   0.0    0.0088        20       1      13 [.     136     148 ..     136     149 .. 0.91
   6 ?   -3.9   0.0         6   1.4e+04       4       8 ..     166     170 ..     164     170 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00015
   PF13516.1  1 lknLtsLdLsnNqi 14
                l+nL++L Ls+N++
  MMETSP1325-20131115|2193_1 42 LPNLQTLSLSHNKF 55
                79**********96 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00062
   PF13516.1  4 LtsLdLsnNqigd.eGls 20
                Lt+L+L++N i + +Gl+
  MMETSP1325-20131115|2193_1 67 LTELNLNFNRICSlDGLQ 84
                9*********97647766 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.0014
   PF13516.1   6 sLdLsnNqigdeGlsaLa 23 
                  L LsnN ++d  l++++
  MMETSP1325-20131115|2193_1  90 KLYLSNNRLSDGALMGFS 107
                 79*********8888765 PP

  == domain 4    score: 7.3 bits;  conditional E-value: 0.0022
   PF13516.1   2 knLtsLdLsnNqigde 17 
                 ++L +L+L +N ++d 
  MMETSP1325-20131115|2193_1 111 PKLHTLCLYRNMLSDL 126
                 79**********9995 PP

  == domain 5    score: 5.5 bits;  conditional E-value: 0.0088
   PF13516.1   1 lknLtsLdLsnNq 13 
                 l++L++LdL +N+
  MMETSP1325-20131115|2193_1 136 LPKLRELDLDGNG 148
                 799*******996 PP

  == domain 6    score: -3.9 bits;  conditional E-value: 6
   PF13516.1   4 LtsLd 8  
                 L+sLd
  MMETSP1325-20131115|2193_1 166 LESLD 170
                 99998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   0.00021      0.49       1      19 [.      44      61 ..      44      64 .. 0.85
   2 !   10.2   0.1   0.00025      0.58       2      17 ..      67      82 ..      66      85 .. 0.87
   3 !    8.7   0.1    0.0008       1.8       2      15 ..      88     106 ..      87     113 .. 0.72
   4 ?    5.1   0.1     0.013        29       1      18 [.     112     129 ..     112     133 .. 0.87
   5 !    6.0   0.0    0.0065        15       1      10 [.     138     147 ..     138     148 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00021
                TESEEEETSSBCBCHHHHH CS
  PF00560.28  1 nLeeLdLsgNnltslppsl 19
                nL++L+Ls+N++ sl   +
  MMETSP1325-20131115|2193_1 44 NLQTLSLSHNKFASLER-F 61
                8**********988876.5 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00025
                ESEEEETSSBCBCHHH CS
  PF00560.28  2 LeeLdLsgNnltslpp 17
                L+eL+L++N+++sl  
  MMETSP1325-20131115|2193_1 67 LTELNLNFNRICSLDG 82
                99**********9865 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.0008
                 ESEEEETSSBCBC.....H CS
  PF00560.28   2 LeeLdLsgNnlts.....l 15 
                 L +L+Ls+N+l++     +
  MMETSP1325-20131115|2193_1  88 LAKLYLSNNRLSDgalmgF 106
                 568********98676653 PP

  == domain 4    score: 5.1 bits;  conditional E-value: 0.013
                 TESEEEETSSBCBCHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslpps 18 
                 +L +L L +N l++l++ 
  MMETSP1325-20131115|2193_1 112 KLHTLCLYRNMLSDLSDA 129
                 699***********9986 PP

  == domain 5    score: 6.0 bits;  conditional E-value: 0.0065
                 TESEEEETSS CS
  PF00560.28   1 nLeeLdLsgN 10 
                 +L+eLdL+gN
  MMETSP1325-20131115|2193_1 138 KLRELDLDGN 147
                 79*******9 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.1   0.00014      0.31       1      16 [.      43      58 ..      43      59 .. 0.90
   2 !    7.8   0.2    0.0019       4.4       2      16 ..      66      80 ..      65      83 .. 0.88
   3 !    7.3   0.1    0.0029       6.5       3      14 ..      88      99 ..      86     103 .. 0.86
   4 ?    2.9   0.2     0.082   1.9e+02       1      16 [.     111     126 ..     111     127 .. 0.88
   5 !    6.8   0.0     0.004       9.1       1      12 [.     137     148 ..     137     151 .. 0.91
   6 ?   -3.3   0.0         6   1.4e+04       2       7 ..     165     170 ..     164     170 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00014
   PF13504.1  1 pnLkeLdLsgnrLtsL 16
                pnL++L+Ls+n++ sL
  MMETSP1325-20131115|2193_1 43 PNLQTLSLSHNKFASL 58
                7**********99876 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0019
   PF13504.1  2 nLkeLdLsgnrLtsL 16
                 L+eL+L+ nr+ sL
  MMETSP1325-20131115|2193_1 66 ALTELNLNFNRICSL 80
                79********99877 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.0029
   PF13504.1  3 LkeLdLsgnrLt 14
                L +L+Ls+nrL 
  MMETSP1325-20131115|2193_1 88 LAKLYLSNNRLS 99
                789*******97 PP

  == domain 4    score: 2.9 bits;  conditional E-value: 0.082
   PF13504.1   1 pnLkeLdLsgnrLtsL 16 
                 p+L +L L +n L +L
  MMETSP1325-20131115|2193_1 111 PKLHTLCLYRNMLSDL 126
                 689********99988 PP

  == domain 5    score: 6.8 bits;  conditional E-value: 0.004
   PF13504.1   1 pnLkeLdLsgnr 12 
                 p+L+eLdL gn+
  MMETSP1325-20131115|2193_1 137 PKLRELDLDGNG 148
                 79********96 PP

  == domain 6    score: -3.3 bits;  conditional E-value: 6
   PF13504.1   2 nLkeLd 7  
                 +L+ Ld
  MMETSP1325-20131115|2193_1 165 RLESLD 170
                 788886 PP

>> PF07723.8  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.012        27       1      13 [.      44      56 ..      44      62 .. 0.81
   2 ?    2.1   0.0      0.12   2.8e+02       4      16 ..      90     102 ..      87     106 .. 0.82
   3 ?    3.2   0.2     0.057   1.3e+02       2      14 ..     113     125 ..     112     132 .. 0.84
   4 ?   -2.1   0.0       2.7   6.1e+03       2       9 ..     139     146 ..     138     148 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.012
   PF07723.8  1 sLKtLhLdsvdfd 13
                +L tL+L++++f+
  MMETSP1325-20131115|2193_1 44 NLQTLSLSHNKFA 56
                699********94 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.12
   PF07723.8   4 tLhLdsvdfddde 16 
                 +L+L+ ++ +d++
  MMETSP1325-20131115|2193_1  90 KLYLSNNRLSDGA 102
                 7********9984 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.057
   PF07723.8   2 LKtLhLdsvdfdd 14 
                 L tL+L++++ +d
  MMETSP1325-20131115|2193_1 113 LHTLCLYRNMLSD 125
                 99******99855 PP

  == domain 4    score: -2.1 bits;  conditional E-value: 2.7
   PF07723.8   2 LKtLhLds 9  
                 L+ L Ld 
  MMETSP1325-20131115|2193_1 139 LRELDLDG 146
                 99999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.60
# Mc/sec: 846.71
//
Query:       MMETSP1325-20131115|2195_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 406.93
//
Query:       MMETSP1325-20131115|2196_1  [L=298]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-08   32.1   0.1    1.1e-07   31.4   0.0    1.3  1  PF00156.22 Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> PF00156.22  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   8.1e-12   1.1e-07      28     123 ..      76     164 ..      66     167 .. 0.89

  Alignments for each domain:
  == domain 1    score: 31.4 bits;  conditional E-value: 8.1e-12
                 --EEEEEE------HHHHHHHHHHHHHH-----SS-SEE---------EEEEES-GGGGTTSEEEEEEEEE----HHHH---TTTT----EEEEEE CS
  PF00156.22  28 kdvvvGiargGvplatelaraLglpldlvrvrkssapassetsrkreaailesrpeedlkgkrvliVDDvlatGgTlraaielLkeagakevgvav 123
                 ++++++i+r G+ ++  + + L +  ++++        +++++ +  ++++++r+++d   +  +++D ++at +T++a+++ Lk+ g  +++v++
  MMETSP1325-20131115|2196_1  76 NTAIIPILRAGLGMVDPMLELLPNAAVHHIG-------MYRNKASLLPVQYYNRLPKDQVAEVSIVMDPMIATAATIKAVVAVLKRWGTSKIIVVC 164
                 344***************************6.......999***********************************************66555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1252.83
//
Query:       MMETSP1325-20131115|2198_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 316.12
//
Query:       MMETSP1325-20131115|2199_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.073   12.4   0.2      0.093   12.1   0.2    1.1  1  PF00689.16 Cation transporting ATPase, C-terminus
       0.58    9.7   4.6        1.4    8.4   0.1    2.0  2  PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
        1.2    7.9   4.3         13    4.4   1.9    2.0  2  PF10317.4  Serpentine type 7TM GPCR chemoreceptor Srd


Domain annotation for each model (and alignments):
>> PF00689.16  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2     2e-05     0.093      44     105 ..      22     111 ..      13     119 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2e-05
  PF00689.16  44 plfskkmllri.liqgllqalvtllafflgll..................gfgisekenkls...................snfaqtaaFitlvlsqifn 105
                 +lf  +m++r+ +i+++++a++ +l   + +                                                  +  ++t++F ++ ++ +f 
  MMETSP1325-20131115|2199_1  22 SLFGYRMVVRVfAILSIVTAFILFLGASALFAelttgqirarvrrkwdneE----------YgtkattfyedadaladekiVFTGHTFMFACFGMLAFFG 111
                 689999999999999999999999988777776666666666655555442..........034444555567777778889*************99985 PP

>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1   0.00031       1.4      56      89 ..      15      48 ..       3      58 .. 0.74
   2 ?    3.2   0.5     0.013        58      61      96 ..      88     123 ..      56     133 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00031
   PF13903.1 56 venesatalldltrvvivflllglvlillaavla 89
                +++e+  +l  ++ vv vf++l++v++++ ++ a
  MMETSP1325-20131115|2199_1 15 NHDEDPVSLFGYRMVVRVFAILSIVTAFILFLGA 48
                3444477889999***********9999877644 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.013
   PF13903.1  61 atalldltrvvivflllglvlillaavlallaslkk 96 
                 a   +  t  + +f+++g+++ +  av +++ +++ 
  MMETSP1325-20131115|2199_1  88 ADEKIVFTGHTFMFACFGMLAFFGMAVKTTCFLICD 123
                 444555566666777777554444444444655554 PP

>> PF10317.4  Serpentine type 7TM GPCR chemoreceptor Srd
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0    0.0078        35     149     189 ..       5      45 ..       2      66 .. 0.78
   2 ?    4.4   1.9    0.0029        13      54      93 ..      87     126 ..      77     128 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.0078
   PF10317.4 149 veaetkelhpnynleeysvtGfsdlksvaaliatliltipv 189
                 +e++ k++  n + ++ s++G+  + +v+a++++++ +i++
  MMETSP1325-20131115|2199_1   5 IEKLRKTNAENHDEDPVSLFGYRMVVRVFAILSIVTAFILF 45 
                 77788888888888888899988888888888877766655 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0029
   PF10317.4  54 llqvRivpnkvslallsyGpckyfgptvCyvlysllqtsl 93 
                 l+  +iv +++++ + + G++ +fg  v  +++ ++ ++ 
  MMETSP1325-20131115|2199_1  87 LADEKIVFTGHTFMFACFGMLAFFGMAVKTTCFLICDHCC 126
                 566789*****************************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       629  (0.0460064); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 739.30
//
Query:       MMETSP1325-20131115|2201_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.6   0.0      0.044   13.5   0.0    1.6  1  PF09066.5 Beta2-adaptin appendage, C-terminal sub-domain


Domain annotation for each model (and alignments):
>> PF09066.5  Beta2-adaptin appendage, C-terminal sub-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.2e-06     0.044      54     113 ..      89     143 ..      35     144 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.2e-06
   PF09066.5  54 AkgeeedqqkllyfsakttngvlvlieliintgsskvqisvKsknpevaqlflqlvekiL 113
                 +k  e      ++  +  + g++vl+  +i++g  +v+i+v+s + e++++++ ++  +L
  MMETSP1325-20131115|2201_1  89 GKTME-----AILAGQVGEGGAPVLVHSKISPGVGTVTITVRSADHEISSAMSRHISMVL 143
                 44333.....3666677777899****************************999998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 738.88
//
Query:       MMETSP1325-20131115|2202_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.76
# Mc/sec: 368.91
//
Query:       MMETSP1325-20131115|2204_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 311.98
//
Query:       MMETSP1325-20131115|2203_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.6   5.2       0.07   12.7   1.6    1.8  2  PF13913.1 zinc-finger of a C2HC-type


Domain annotation for each model (and alignments):
>> PF13913.1  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.6   5.1e-06      0.07       4      24 ..      45      65 ..      43      65 .. 0.96
   2 ?   -1.9   0.0      0.19   2.6e+03      11      15 ..      79      83 ..      78      83 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.1e-06
   PF13913.1  4 pCpiCgRsFnpdrlakHepvC 24
                +Cp+C   F+p++l+ H++ C
  MMETSP1325-20131115|2203_1 45 KCPNCCKAFAPTSLVSHMREC 65
                7******************99 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.19
   PF13913.1 11 sFnpd 15
                +Fnp+
  MMETSP1325-20131115|2203_1 79 KFNPE 83
                9**96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 790.80
//
Query:       MMETSP1325-20131115|2207_1  [L=363]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-32  111.1   0.1    4.1e-32  109.7   0.0    1.7  1  PF10609.4  ParA/MinD ATPase like
    3.1e-18   65.7   0.0    4.8e-18   65.1   0.0    1.3  1  PF01656.18 CobQ/CobB/MinD/ParA nucleotide binding domain
    1.1e-07   31.8   0.0    1.5e-06   28.1   0.0    2.2  2  PF13614.1  AAA domain
    8.4e-07   28.2   0.0      9e-06   24.8   0.0    2.0  2  PF09140.6  ATPase MipZ
    2.2e-06   26.8   0.8    2.2e-06   26.8   0.6    2.1  3  PF02374.10 Anion-transporting ATPase
    0.00048   19.2   0.0     0.0049   15.9   0.0    2.2  2  PF00142.13 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
    0.00066   18.9   0.2     0.0014   17.9   0.1    1.5  1  PF13481.1  AAA domain
     0.0012   18.4   0.0       0.28   10.6   0.0    2.8  2  PF13500.1  AAA domain
     0.0014   18.2   1.1      0.018   14.6   0.1    2.6  2  PF13245.1  Part of AAA domain
     0.0019   16.9   0.1     0.0036   16.0   0.1    1.4  1  PF03308.11 ArgK protein
     0.0054   16.0   0.0      0.013   14.8   0.0    1.7  1  PF00448.17 SRP54-type protein, GTPase domain
      0.006   16.1   0.0      0.011   15.2   0.0    1.4  1  PF01583.15 Adenylylsulphate kinase
  ------ inclusion threshold ------
      0.022   14.0   0.1      0.031   13.5   0.0    1.3  1  PF06564.7  YhjQ protein
      0.023   14.1   0.3       0.41   10.1   0.1    2.5  2  PF13555.1  P-loop containing region of AAA domain
       0.04   13.0   0.3      0.086   11.9   0.2    1.5  1  PF03193.11 Protein of unknown function, DUF258
      0.051   12.5   0.1       0.11   11.4   0.1    1.5  1  PF07015.6  VirC1 protein
      0.053   12.8   0.1      0.093   12.0   0.1    1.3  1  PF01695.12 IstB-like ATP binding protein
      0.073   11.8   0.1       0.11   11.1   0.1    1.2  1  PF00931.17 NB-ARC domain
      0.081   12.0   0.1       0.12   11.4   0.1    1.2  1  PF12846.2  AAA-like domain
      0.081   12.4   0.4       0.14   11.5   0.3    1.4  1  PF05729.7  NACHT domain


Domain annotation for each model (and alignments):
>> PF10609.4  ParA/MinD ATPase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.7   0.0   6.1e-35   4.1e-32       1      69 [.     150     221 ..     150     227 .. 0.96

  Alignments for each domain:
  == domain 1    score: 109.7 bits;  conditional E-value: 6.1e-35
                 -S-EEEE-------HHHHHHHHH-...----EEEE-CCC--HHHHHHHHHHHHCTT------EECT-EEE-S CS
   PF10609.4   1 lDyLliDlPPGtgDehlslvqklp...ldgavivttpqevaladvrkeiklfkkleipilGvveNmsyfvcp 69 
                 lDyL++D+PPGt+Dehls++q+l+   +dgav+vttpqeva++dvrkei++++k+++++lG+veNms+++ p
  MMETSP1325-20131115|2207_1 150 LDYLIVDTPPGTSDEHLSIIQYLRgsgIDGAVVVTTPQEVAMQDVRKEINFCRKTNVEVLGLVENMSGYQSP 221
                 8**********************88889*****************************************987 PP

>> PF01656.18  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0     7e-21   4.8e-18       1     161 [.      37     219 ..      37     232 .. 0.82

  Alignments for each domain:
  == domain 1    score: 65.1 bits;  conditional E-value: 7e-21
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01656.18   1 iaiasgkGGvGKTtlaanLaralakrglrVlliDlDpqannssllgkvseilkkgeekasal...........................lenfeagllaegeeg.lvesllkkalealikeayDvviiDtapglgel...vanalqaa..dllvvviepekfsvegakrilellerlgkklkilgvvlnkvdrg 161
                 i + sgkGGvGK+t+a+ La+ la  g+ V l+D+D+ ++    +++       +++++++                            l n++  ++ +   g +++ l+k+ l+ +     D++i+Dt+pg ++    ++  l  +  d +vvv++p+ ++++++++ ++ +++ +   ++lg v n+ + +
  MMETSP1325-20131115|2207_1  37 ILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVDICGPSVPRMLGL------SGREVQQSgsgwtpimvdldgdtdgellvmsvgfmLPNADDAVIWR---GpRKNGLIKQFLTDVNWGTLDYLIVDTPPGTSDEhlsIIQYLRGSgiDGAVVVTTPQEVAMQDVRKEINFCRKTN--VEVLGLVENMSGYQ 219
                 6899*********************************99977766655......3344443367888889999887777777777776655666666666...5788889999999977777***************888777777665599***********************888..889*****998554 PP

>> PF13614.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0   2.2e-09   1.5e-06       3      53 ..      37      87 ..      36     114 .. 0.92
   2 ?    1.2   0.0       0.4   2.8e+02     108     132 ..     139     164 ..     133     192 .. 0.84

  Alignments for each domain:
  == domain 1    score: 28.1 bits;  conditional E-value: 2.2e-09
   PF13614.1  3 igvySpvggegkttlAlnlaqslaenrkkvLlldleeysgslalflgleek 53
                i v+S +gg+gk+t A  la +la +++ v lld +  ++s  ++lgl+++
  MMETSP1325-20131115|2207_1 37 ILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVDICGPSVPRMLGLSGR 87
                789************************99******************9987 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.4
   PF13614.1 108 eqLlerlke.rYdvvilDlgsllded 132
                 +q+l++    + d++i+D++++++++
  MMETSP1325-20131115|2207_1 139 KQFLTDVNWgTLDYLIVDTPPGTSDE 164
                 5677777777789********98876 PP

>> PF09140.6  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   1.3e-08     9e-06       2      48 ..      36      82 ..      35      98 .. 0.87
   2 ?    1.1   0.0      0.22   1.5e+02      90     109 ..     140     161 ..     107     174 .. 0.72

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 1.3e-08
   PF09140.6  2 vivlgnekGGsGksttavhvavaLlkkgakvaaiDlDlrqrtltryl 48
                 i++   kGG Gkstta  +a +L+++g +v+ +D+D    ++ r l
  MMETSP1325-20131115|2207_1 36 KILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVDICGPSVPRML 82
                5677788******************************9888877766 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.22
   PF09140.6  90 eavaelea.eaDfiviDtP.Gs 109
                 + +++++  + D++++DtP G+
  MMETSP1325-20131115|2207_1 140 QFLTDVNWgTLDYLIVDTPpGT 161
                 55555554268*******8343 PP

>> PF02374.10  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.6   3.3e-09   2.2e-06       1      38 [.      35      72 ..      35      75 .. 0.91
   2 ?   -0.9   0.0      0.84   5.7e+02     118     136 ..     141     159 ..     137     173 .. 0.79
   3 ?   -2.7   0.1       3.1   2.1e+03     210     242 ..     180     212 ..     154     216 .. 0.76

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 3.3e-09
                -CEEEE--------HHHHHHHHHHHHHTTS-EEEEE-- CS
  PF02374.10  1 lkviffgGKGGVGKttvsaatavklseqgkkvllvstD 38
                +k+++++GKGGVGK+t ++ +a  l+ +g++v l+  D
  MMETSP1325-20131115|2207_1 35 HKILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVD 72
                5899*************************999877666 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.84
                 HHHHHHC--SSEEEEE--- CS
  PF02374.10 118 llklvkeeeydvvifDtAP 136
                 +l  v+  + d++i+Dt+P
  MMETSP1325-20131115|2207_1 141 FLTDVNWGTLDYLIVDTPP 159
                 5555667788*******99 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 3.1
                 EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEE CS
  PF02374.10 210 fvlVvipeklslkEteRaikeLakygikvdavi 242
                  v+V++p++++++++++ i+   k +++v  ++
  MMETSP1325-20131115|2207_1 180 AVVVTTPQEVAMQDVRKEINFCRKTNVEVLGLV 212
                 578888888888888888888888888776666 PP

>> PF00142.13  4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   7.1e-06    0.0049       4      32 ..      39      67 ..      36      82 .. 0.85
   2 ?    0.4   0.0       0.4   2.7e+02     197     243 ..     271     317 ..     266     331 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 7.1e-06
  PF00142.13  4 aiYGkGGiGksttsqnlaaalaemgkkvl 32
                 + GkGG+Gkstt + la +la+ g+ v 
  MMETSP1325-20131115|2207_1 39 VLSGKGGVGKSTTACQLAFTLAAEGNSVG 67
                578*******************9998875 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.4
  PF00142.13 197 faeklgtkllevvPrdnivrkaelrkktvieyaeeseqakeyrelak 243
                 +a+k g++ll ++P dn++  a  + +  +   ++s  ++  + +  
  MMETSP1325-20131115|2207_1 271 MASKFGVDLLGKLPLDNQLMAACEQGQAFVTAYPDSVACEPLKGIVA 317
                 6889999************9999998888888888877777666655 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1     2e-06    0.0014      32      65 ..      34      67 ..      16      86 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 2e-06
   PF13481.1 32 rgsltllaGapgtGKStlalqlaaavatGepflg 65
                ++ +++l G +g+GKSt a+qla  +a+ ++  g
  MMETSP1325-20131115|2207_1 34 KHKILVLSGKGGVGKSTTACQLAFTLAAEGNSVG 67
                577899*********************6665555 PP

>> PF13500.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.047        32     100     130 ..      35      65 ..       8      72 .. 0.62
   2 !   10.6   0.0   0.00041      0.28     133     197 ..     181     291 ..     149     292 .. 0.73

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.047
   PF13500.1 100 rdivvvEGagglavpltseslnadiakslgl 130
                 ++i+v+ G gg+++ +t+ +l + +a++ + 
  MMETSP1325-20131115|2207_1  35 HKILVLSGKGGVGKSTTACQLAFTLAAEGNS 65 
                 4555555555555555555555555554333 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00041
   PF13500.1 133 lLVargglgtinhtllaiealrsrgvrilgviinkvnep.........e.....................................nvealrkkspvpvlgavPedpdlra 197
                 ++V+++++ +++++   i+ +r+ +v++lg++ n +  +         +                                       + + +k++v++lg +P d++l+a
  MMETSP1325-20131115|2207_1 181 VVVTTPQEVAMQDVRKEINFCRKTNVEVLGLVENMSGYQspvnqlrflDpsngtdvtadtlamikakcpelmsmiasaevfpafgdGPQGMASKFGVDLLGKLPLDNQLMA 291
                 45555566789999999***************9996555335555555055566666666777777777777777777777788889999999999********9999976 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   2.6e-05     0.018       7      47 ..      33      68 ..      26      70 .. 0.86
   2 ?    1.3   0.0      0.37   2.6e+02      13      60 ..     153     196 ..     149     216 .. 0.62

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2.6e-05
   PF13245.1  7 lagnpllvvtGgPGtGKTttlaaiiaallaarekpgrsvll 47
                ++ +++lv+ G  G GK+tt+++++  l+a+    g sv l
  MMETSP1325-20131115|2207_1 33 VK-HKILVLSGKGGVGKSTTACQLAFTLAAE----GNSVGL 68
                45.9**********************99988....888765 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.37
   PF13245.1  13 lvvtGgPGtGKTttlaaiiaallaarekp.grsvllvaptgraakrlse 60 
                 l+v+ +PGt      + ii +l      + +  v++ +p+  a + +++
  MMETSP1325-20131115|2207_1 153 LIVDTPPGTSDE--HLSIIQYLR---GSGiDGAVVVTTPQEVAMQDVRK 196
                 577888888444..344555554...22334456666666666666655 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   5.2e-06    0.0036      30      68 ..      36      74 ..      30      84 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 5.2e-06
                EEE--B-------HHHHHH---HHHH----EEEEEE--- CS
  PF03308.11 30 lvvGltGvPGaGkstlveklikelrrrGkrvavlavDPs 68
                +++ l G  G+Gkst+  +l+ +l+++G+ v++l vD  
  MMETSP1325-20131115|2207_1 36 KILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVDIC 74
                567799******************************954 PP

>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.9e-05     0.013       2      39 ..      36      73 ..      35      91 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.9e-05
                EEEEEE-------TTTHHHHHHHHHHT---EEEEE--T CS
  PF00448.17  2 nvillvGlqGaGKTTtlaKLAallkkegkkvllvaaDt 39
                ++++l G  G+GK Tt+  LA  l +eg++v l  +D+
  MMETSP1325-20131115|2207_1 36 KILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVDI 73
                578999***************************99997 PP

>> PF01583.15  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.7e-05     0.011       4      52 ..      37      85 ..      34      92 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.7e-05
                EEEEE-ETT---HHHHHHHHHHHHCTS--EEEE---TTT----TT---- CS
  PF01583.15  4 vvwltGlsgsGKstiavalekkLvekgikvylLdGdnvRhgLnkdLgfs 52
                ++ l+G  g GKst a++l+ +L ++g +v lLd d    ++ + Lg s
  MMETSP1325-20131115|2207_1 37 ILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVDICGPSVPRMLGLS 85
                7899******************************998877777777766 PP

>> PF06564.7  YhjQ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.5e-05     0.031       3      77 ..      37     115 ..      35     167 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4.5e-05
   PF06564.7   3 vlaLqGvrGGvGttsllaaLgwalqelgesv..LviDls.Pd..nlLrlsfnvdleqseGWaraeldgrdwrdaalryle 77 
                 +l+L G +GGvG+++ +  L+++l   g+sv  L +D++ P+   +L+ls     +  +GW   ++d     d+ l +++
  MMETSP1325-20131115|2207_1  37 ILVLSG-KGGVGKSTTACQLAFTLAAEGNSVglLDVDICgPSvpRMLGLSGREVQQSGSGWTPIMVDLDGDTDGELLVMS 115
                 788888.8**********************94344566634333688888877777889999888887777776666555 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1    0.0006      0.41      22      39 ..      34      51 ..      24      63 .. 0.79
   2 ?    0.8   0.0      0.47   3.2e+02       7      17 ..     145     155 ..     141     164 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0006
   PF13555.1 22 kgkntlltGasGsGKSTl 39
                k+k  +l+G+ G+GKST 
  MMETSP1325-20131115|2207_1 34 KHKILVLSGKGGVGKSTT 51
                466899***********6 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.47
   PF13555.1   7 vNWgtfdghtv 17 
                 vNWgt+d   v
  MMETSP1325-20131115|2207_1 145 VNWGTLDYLIV 155
                 8****996555 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   0.00013     0.086      32      56 ..      32      56 ..      26      68 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00013
                HCTTSBEEEE-------HHHHHHH- CS
  PF03193.11 32 llkdktsvlvGqSGvGKSsLinall 56
                ++k+k+ vl G+ GvGKS+   +l+
  MMETSP1325-20131115|2207_1 32 QVKHKILVLSGKGGVGKSTTACQLA 56
                5899***************877776 PP

>> PF07015.6  VirC1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00016      0.11       6      39 ..      39      72 ..      35      80 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00016
   PF07015.6  6 fcslkGGaGkttalmglcsalasdgkrvalfead 39
                + s kGG Gk+t+   l  +la++g+ v+l++ d
  MMETSP1325-20131115|2207_1 39 VLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVD 72
                6688***************************998 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   0.00014     0.093      46      81 ..      34      69 ..      29      74 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00014
  PF01695.12 46 qaenlvllGpsGvGKthlAialgveavraglsvlfv 81
                +++ lvl G  GvGK+  A+ l+   + +g sv  +
  MMETSP1325-20131115|2207_1 34 KHKILVLSGKGGVGKSTTACQLAFTLAAEGNSVGLL 69
                47789*************************999765 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00017      0.11       9      38 ..      27      54 ..      20      59 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00017
                HHHHHTTTSSSEEEEEE-------HHHHHH CS
  PF00931.17  9 iekLleeeeelkvvglvGmgGvGKttlakq 38
                 ++L++   + k++ l+G+gGvGK+t+a q
  MMETSP1325-20131115|2207_1 27 GDRLSQ--VKHKILVLSGKGGVGKSTTACQ 54
                566777..6788999***********9976 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00018      0.12       5      44 ..      39      81 ..      36     108 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00018
   PF12846.2  5 lilGppGsGKSvllkklvlqllargprvviiDp...ggeysgl 44
                +++G+ G GKS+++  l++ l+a+g  v  +D+   g++  ++
  MMETSP1325-20131115|2207_1 39 VLSGKGGVGKSTTACQLAFTLAAEGNSVGLLDVdicGPSVPRM 81
                789****************************885566665555 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   0.00021      0.14       2      27 ..      37      62 ..      36      69 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00021
   PF05729.7  2 tvilqGeaGsGKTtLlqklasawakg 27
                +++l G+ G+GK+t +++la ++a++
  MMETSP1325-20131115|2207_1 37 ILVLSGKGGVGKSTTACQLAFTLAAE 62
                5799******************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.51
# Mc/sec: 1705.64
//
Query:       MMETSP1325-20131115|2208_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.011   15.5   0.1       0.21   11.4   0.1    2.1  2  PF00651.26 BTB/POZ domain


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   1.5e-05      0.21      60     107 ..       4      52 ..       1      56 [. 0.85
   2 ?    2.2   0.0     0.012   1.6e+02      83     109 ..      60      86 ..      54      87 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.5e-05
                 -HHHHHHHHHHHCCSEEEC..ECCHHHHHHHHHHHHT-HHHHCHHHHHH CS
  PF00651.26  60 epevfealLefiYtgeleit.seenveelLaaadllqiprlkdaceefl 107
                 +  +++ +++++Yt++l+ + + ++++e++ +++ + +p+l+  ++  l
  MMETSP1325-20131115|2208_1   4 SGAALQVIVRYCYTAQLSPDlNADTLMEVIFMSEEYLLPQLRLDAAAAL 52 
                 5678999************99999*************999987766666 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHHT-HHHHCHHHHHHHH CS
  PF00651.26  83 nveelLaaadllqiprlkdaceeflke 109
                 +  + L++ d +++p l+ a++++l+ 
  MMETSP1325-20131115|2208_1  60 TCIDALQIGDSFDLPGLRVAAARYLLD 86 
                 567889**************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|2210_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        81  (0.00592452); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|2212_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.19   11.5   7.5        0.2   11.4   5.2    1.1  1  PF11208.3  Protein of unknown function (DUF2992)
       0.49    8.0   1.8       0.53    7.9   1.2    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
        1.4    8.5   4.9        1.4    8.5   3.4    1.0  1  PF02862.12 DDHD domain
        2.9    6.6   7.6        2.9    6.5   5.3    1.1  1  PF14362.1  Domain of unknown function (DUF4407)
        6.9    5.9  14.5        9.6    5.4  10.1    1.3  1  PF09756.4  DDRGK domain


Domain annotation for each model (and alignments):
>> PF11208.3  Protein of unknown function (DUF2992)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   5.2   7.3e-05       0.2      61     130 ..      28     101 ..       8     103 .] 0.66

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.3e-05
   PF11208.3  61 kekkknpKrlqRevk.kevkkkkvstkA.qea..lklelekkkkekkkkskekkeeekerkfqlkqeKkkekhr 130
                 + ++  +K+   e+  ++++ ++++ +A qea  ++++++++++++ ++++++ +ee+e  +q  +e +++kh 
  MMETSP1325-20131115|2212_1  28 SAEEAGIKKFIAECMaEKADVPGPGKRAaQEAdtIQQNQNREQRRRDQEQRRRDREEEEAARQAAEEEARQKHA 101
                 55666677777776623444467766551554226666666666666777777788889999999*******96 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.2   0.00019      0.53     186     263 ..      14      91 ..       4     101 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00019
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14 186 ekvekevfiiffvgeellekvkkilesfgaelyevpeteeersellskvnkriedlktvleeteselekvlakiadel 263
                 e++++   + +++g +++  +kk + ++ ae+ +vp   ++  +  ++++++ +  ++++++ ++++ ++ +++a + 
  MMETSP1325-20131115|2212_1  14 ENIAAISTLSYIKGSAEEAGIKKFIAECMAEKADVPGPGKRAAQEADTIQQNQNREQRRRDQEQRRRDREEEEAARQA 91 
                 6777788899**************************999999999999999988888888888888888877777654 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.4    0.0005       1.4     112     179 ..      31      98 ..       4     103 .] 0.65

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0005
  PF02862.12 112 tsslsegiasslrnsslslssedeeseeeseasklsqksksekkkeseeetkeeeeeakkekreelkl 179
                   +++++ia+ + +++   +  + +++e+++++++++++++++ +e++++ +eeee a++ ++ee++ 
  MMETSP1325-20131115|2212_1  31 EAGIKKFIAECMAEKADVPGPGKRAAQEADTIQQNQNREQRRRDQEQRRRDREEEEAARQAAEEEARQ 98 
                 55667777777777777777777777777777777777777777777777777777777666666654 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   5.3    0.0011       2.9     166     228 ..      38     100 ..      16     103 .] 0.58

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0011
   PF14362.1 166 qceleGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaelean.krkaaleeeraak 228
                 ++e++  +++ v+G G+++ +  +  ++ q++ ++ + q++ + ++ e++ +r+aa+ee+r++ 
  MMETSP1325-20131115|2212_1  38 IAECMA-EKADVPGPGKRAAQEADTIQQNQNREQRRRDQEQRRRDREEEEaARQAAEEEARQKH 100
                 455554.577888888777777666666665555544443333333332223444444444443 PP

>> PF09756.4  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  10.1    0.0035       9.6      13      61 ..      60      98 ..      43     103 .] 0.36

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0035
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF09756.4 13 ekearkqqreaeeeereerkkkeekrekerkeeeekeeekekkkeeeer 61
                          +++++re+r++ +e+r   r+++ee+e ++++++ee+++
  MMETSP1325-20131115|2212_1 60 D-------TIQQNQNREQRRRDQEQR---RRDREEEEAARQAAEEEARQ 98
                2.......222223333333333333...22222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1740  (0.127267); expected 273.4 (0.02)
Passed bias filter:                      906  (0.0662668); expected 273.4 (0.02)
Passed Vit filter:                       152  (0.0111176); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.48s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 474.66
//
Query:       MMETSP1325-20131115|2211_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1    9.2  14.0        2.3    8.1   9.7    1.6  1  PF06112.6 Gammaherpesvirus capsid protein
        1.3    7.0  10.2        1.9    6.5   7.0    1.2  1  PF09726.4 Transmembrane protein
        8.1    4.8   8.5       0.76    8.2   0.1    2.0  2  PF04388.7 Hamartin protein


Domain annotation for each model (and alignments):
>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   9.7   0.00051       2.3      78     132 ..     148     200 ..     128     211 .. 0.49

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00051
   PF06112.6  78 rgakpetsssigsalsassssasgvpggaalSsssvsalsSgpsslsssssesss 132
                 + +k  +++++g+++s + ss+s+  + ++ +ss  s+++S+ +s +s  s+sss
  MMETSP1325-20131115|2211_1 148 KKKKATANDDKGGGGSKAGSSSSSE-SHSGSGSSTGSSTDSSTGSSTSD-SDSSS 200
                 3334334444444444444444443.34433333333333333333322.23333 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   7.0   0.00041       1.9     234     380 ..      61     202 ..      25     217 .. 0.47

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00041
   PF09726.4 234 kksknahslkki.sasalserkekgkdkaknssdkkkekkelqqknhhasksksvqsyssklqeievkenvsnkskksseslagsaeelalkkdsnsssaeeksakskssksaktskrsksnsspkshksaagsvssssvkkneskdk 380
                 kk  +++++k+    + l e  + g  k  ++  + kek + + +++++ + +  +   +  +e++  +  s++ k+     + +   + lkk++ ++++++k  ++++  s+ +s++s+s s +++ +s+ +s+ ss++++++s d+
  MMETSP1325-20131115|2211_1  61 KK-TKRKKRKEAkERKRLEEMGDAGTAKLFAK--RLKEKVKAKARREEKGVAQMGEEGGGGAEEVDQEKARSEQGKLGGI-GTVKLIAMRLKKKK-ATANDDKGGGGSKAGSS-SSSESHSGSGSSTGSSTDSSTGSSTSDSDSSSDD 202
                 11.12222222202223334444444443333..3333333333344345555555557777778777777777766665.44455555666664.44444443333333322.3444455555555555555555555544444333 PP

>> PF04388.7  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.1   0.00017      0.76     550     590 ..      42      82 ..      10     108 .. 0.85
   2 ?   -0.4   2.4      0.07   3.2e+02     359     396 ..     166     204 ..     151     214 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00017
   PF04388.7 550 pyeslldlalpktaslflkrktkEalkkeaeerlsqeeiee 590
                   + +++++++k a+  +++ktk  ++kea+er+  ee+ +
  MMETSP1325-20131115|2211_1  42 GKDGVFEVSAAKLAAKRIRKKTKRKKRKEAKERKRLEEMGD 82 
                 55788****************************99988765 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.07
   PF04388.7 359 ashlssrvkgetgsgklelasestpstssppPaladd.i 396
                  s  ss+ ++ +gs+ +  +  st s +s+  + +dd  
  MMETSP1325-20131115|2211_1 166 GSSSSSESHSGSGSSTGSSTDSSTGSSTSDSDSSSDDeL 204
                 577788899999999999999999988888777777743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1188  (0.0868929); expected 273.4 (0.02)
Passed bias filter:                      493  (0.0360591); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.43s 00:00:01.09 Elapsed: 00:00:00.66
# Mc/sec: 806.05
//
Query:       MMETSP1325-20131115|2213_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 505.90
//
Query:       MMETSP1325-20131115|2215_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        4.9    7.0  11.0        1.3    8.8   1.8    2.6  2  PF08755.6 Hemimethylated DNA-binding protein YccV like


Domain annotation for each model (and alignments):
>> PF08755.6  Hemimethylated DNA-binding protein YccV like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   1.8   9.7e-05       1.3      31      96 ..      57     122 ..      52     126 .. 0.80
   2 ?    3.5   0.4    0.0043        59      55      96 ..     125     165 ..     122     172 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 9.7e-05
                 -----------.-------EEEEEEE-----EEEEEEGGGEEE---S--TT-HHHHHHHHHHTT-- CS
   PF08755.6  31 seewleeiaeekrperkqpfYhllvedkeselvaYvaeenLledeskesikhpeieelfeefdear 96 
                 ++  +eei + +++++++   ++++ ++ +e+ + +aeenL  +e   + + ++++e++ + +++ 
  MMETSP1325-20131115|2215_1  57 TKGRAEEIVRMRKENERKNQEKVVMAKRAEEKERKLAEENLRMEERARRARAQQLDEMYRKKQQEV 122
                 555666666666666666667899999999999**************************9988765 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.0043
                 EE-----EEEEEEGGGEEE---S--TT-HHHHHHHHHHTT-- CS
   PF08755.6  55 vedkeselvaYvaeenLledeskesikhpeieelfeefdear 96 
                 v+ ++++   Yv+ +n+++  ++++ k ++i+++ ee+ ++r
  MMETSP1325-20131115|2215_1 125 VKLEKVNNKEYVQRQNMMS-LKEKKAKREAIKRHEEEIAAQR 165
                 5556677889*******55.4556667778877777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2918  (0.213429); expected 273.4 (0.02)
Passed bias filter:                      421  (0.0307929); expected 273.4 (0.02)
Passed Vit filter:                       107  (0.00782621); expected 13.7 (0.001)
Passed Fwd filter:                        29  (0.00212112); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.66s 00:00:01.52 Elapsed: 00:00:00.65
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|2217_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        69  (0.00504681); expected 273.4 (0.02)
Passed bias filter:                       69  (0.00504681); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.36s 00:00:00.63 Elapsed: 00:00:00.46
# Mc/sec: 270.89
//
Query:       MMETSP1325-20131115|2218_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|2216_1  [L=427]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.39s 00:00:01.14 Elapsed: 00:00:00.57
# Mc/sec: 1764.21
//
Query:       MMETSP1325-20131115|2222_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-11   43.8   0.7    1.8e-11   43.4   0.5    1.1  1  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.5   1.3e-15   1.8e-11       9      89 ..      59     135 ..      53     139 .. 0.94

  Alignments for each domain:
  == domain 1    score: 43.4 bits;  conditional E-value: 1.3e-15
                 HH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   9 llaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlk 89 
                 + ++++ g++ ++ t  +  ++t ++    s++ ky+g+l ++  ++++ G++glyrG+++++ r  p+a ++f + e+l+
  MMETSP1325-20131115|2222_1  59 FSTSVVTGLAVTTTTSAFTNARTHMM----SNPGKYTGMLACMADVVRTLGPLGLYRGFMAQWARFGPYATVQFIVWEQLR 135
                 56788999999***************....***********************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 713.91
//
Query:       MMETSP1325-20131115|2219_1  [L=649]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-13   50.8   0.0      3e-13   49.9   0.0    1.3  1  PF02872.13 5'-nucleotidase, C-terminal domain
    1.8e-07   30.7   0.6    2.3e-06   27.0   0.4    2.3  1  PF00149.23 Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> PF02872.13  5'-nucleotidase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.0   4.3e-17     3e-13      21     146 ..     447     584 ..     427     593 .. 0.82

  Alignments for each domain:
  == domain 1    score: 49.9 bits;  conditional E-value: 4.3e-17
  PF02872.13  21 tnlgnliadaqreaagadialangggirad...aGeitrgdvlailpfgntlvvveltGkqLkeaLendaqsekkgasgaflqvsGlryti...dlskpagervvsltltingk.......pldddktYkvatnsYlas 146
                 ++  +l+a+a+r+ ++++i+++n gg r      Geit gd+++++pf++tl++ +++ k + ++ +++a+     +s ++  +sG++yt     +s +ag++ + + l+ing        +l +++ Y+v + +Yl++
  MMETSP1325-20131115|2219_1 447 HPCVRLLAEAFRRRYDTNIGIMNYGGTRGGgfpTGEITLGDAYSVCPFDGTLSTCRMNAKFVNTLAQHTANALLCRGSEKY-GFSGVDYTAvrlETSDEAGRQWQAVGLSINGSeiidsrgDLGEEEWYRVSVPTYLLH 584
                 567799***********************6689*************************98777777763333334444333.588***987544666677888888888899998888888999999*********985 PP

>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.4   3.3e-10   2.3e-06       2     200 ..     103     315 ..     102     316 .. 0.81

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 3.3e-10
                 EEEEEEEBTBBHHHHH.......H...HHHHHHHHHHHTTTSEE.EEE-TTSSGHHCHHHHHHHHHHCCHHHHTTSCEEEE---TTTHHHHHHHHHSTTHHHHCHSTCSSTCCCEES..................T....EEEEETTEEE..EEEETTSHCSTCHHHHHHHHHHHHHHCCEEESEEEEEESSSSCHHHCTTTTH..SCCHHHHHHHHHHHHTTSSEEEE-SSSS CS
  PF00149.23   2 rilvigDlHgglddle.......g...lllilleiaaeekpdlv.lflGDlvdrgdwssetlalldylvlklllpipvfllrGNHEsdpgnsaygflkeqakdprglanaeeeyeel..................s....itllttsgel..gglsglypllggeiqeeqleeflalplralvdgkilltHgplsssggssddigggelfgpdalekllekygvdlvlrGHeHv 200
                 ri v++D+H     +        +    l ++ ++ a+ ++ +v l +GD +++ + +  + + +   ++ ++l ++++++ GNH+ d g  +++    +a+ pr +   ++   ++                  +    +t l++s+ +  +g    ++ +  e  e+  +  ++l    lvd  i l+H ++ ++                  + l e++ +d+++ GH+Hv
  MMETSP1325-20131115|2219_1 103 RIFVTTDTHSSMKANAhgrggvpEralELVRQRKACARDGAEFVlLDNGDAFQGTPFFQFYAGEV--DMRCMHLMGYHAMCVGNHDLDLGI-PNLVAQATAHAPRLELLSCNIVKNKsdpqsyvfspyviietagGvrvgVTGLMGSNAWacVGMKQRGDAVLVEPLEAARRISEELRGGGLVDALICLSHSGHVDD------------------IALAEQPFFDVIFGGHDHV 315
                 899**********9999987665167877777777777777777366******************..*********************754.55555566666666666555555558999999888877766651667766666666542266778899999********************************98..................89****************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.01u 0.35s 00:00:01.36 Elapsed: 00:00:01.18
# Mc/sec: 1318.00
//
Query:       MMETSP1325-20131115|2221_1  [L=368]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-57  191.3   3.8    8.4e-21   73.3   0.1    3.7  3  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.0     2e-21   2.7e-17       4      93 ..      13     152 ..      11     155 .. 0.88
   2 !   54.4   0.0   4.9e-19   6.7e-15       6      92 ..     159     250 ..     156     253 .. 0.86
   3 !   73.3   0.1   6.2e-25   8.4e-21       6      92 ..     264     363 ..     261     367 .. 0.94

  Alignments for each domain:
  == domain 1    score: 62.1 bits;  conditional E-value: 2e-21
                 HHHHHHH----HHHCCHHHCHHHHHHHHHHH..................................................-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH- CS
  PF00153.22   4 svlksllaGaiAgaiaalvttPldvvKtrlq..................................................ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkklls 93 
                 ++l ++++++++ +++al++tPldvvK+r q                                                  +++++++    ++l+ + +iy++eG+rg y+Gl+p+l+  vpa++++f++y+ lk  ++
  MMETSP1325-20131115|2221_1  13 PFLVRIVSSSFGSLMTALAVTPLDVVKVRQQammaeptpqtkitmsqcskcgtfvlnnglmehiinkcntahfiehevvgfAASQTGRGMPASTLGGIAHIYRREGLRGIYSGLSPTLVMAVPATVMYFTAYDELKARFT 152
                 688999*************************998888888888888888888888888888888888888888888888887777777778888888***************************************9876 PP

  == domain 2    score: 54.4 bits;  conditional E-value: 4.9e-19
                 HHHHH----HHHCCHHHCHHHHHHHHHHH.....-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   6 lksllaGaiAgaiaalvttPldvvKtrlq.....ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                 ++  +aG +A ++a++vt P+++++t  q         ++++   g++ + ++i+++ G+ gl+rGl p+l r+vp +++++++ e+ k  l
  MMETSP1325-20131115|2221_1 159 WAAPVAGTTARVFASSVTSPFELIRTLSQageqgGGLGGHATGGGGLVATARTIVRQGGVFGLWRGLEPTLWRDVPFSGVYWLALEQGKLAL 250
                 56678************************886554444445556789999************************************998766 PP

  == domain 3    score: 73.3 bits;  conditional E-value: 6.2e-25
                 HHHHH----HHHCCHHHCHHHHHHHHHHH.............-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   6 lksllaGaiAgaiaalvttPldvvKtrlq.............ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                 ++ ++aGa Ag++aa+++tP+dvvKtr q             +  +sas  + ++ ++++ i+k eG  gl+rG  +++l+v+pa ai++++yet k+++
  MMETSP1325-20131115|2221_1 264 ARAFVAGAGAGMLAAVLVTPFDVVKTRRQlyttlasdpevasTIDHSASAGNGSTAQVIRGIMKDEGAAGLFRGAYARVLKVTPACAIMIGVYETGKSVF 363
                 6789************************************997788888888999******************************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.38s 00:00:01.04 Elapsed: 00:00:00.86
# Mc/sec: 1025.42
//
Query:       MMETSP1325-20131115|2225_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 288.45
//
Query:       MMETSP1325-20131115|2223_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.06   12.5   1.6      0.085   12.0   1.1    1.1  1  PF05285.7  SDA1
       0.27    9.8   2.5       0.32    9.5   1.7    1.1  1  PF03985.8  Paf1


Domain annotation for each model (and alignments):
>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.1   1.2e-05     0.085     120     194 ..      30     111 ..      23     124 .. 0.55

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.2e-05
   PF05285.7 120 dvesdeeeessDsedeeeeseeeeeeeesekkkkeesdeekseeeeeeaaeeeeee.....akeekiselass..riLTdaD 194
                 ++++d+e+  sD ede+ees+ ++  e+ e +  + +++++s++e+e a+   + +       +++i++ a +  r+LT aD
  MMETSP1325-20131115|2223_1  30 SDSEDDEYVYSDYEDEDEESQGDDMMEDGEGGGGKGKESKSSARETEGAQGGDSYSspskgGDRNAITRCADDesRLLTVAD 111
                 3444466788888888887777433333333333333333333333333333322233444556666666543338898888 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.7   4.6e-05      0.32     335     417 ..      11      94 ..       1     106 [. 0.79

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 4.6e-05
   PF03985.8 335 vkehnvdklnvk.lRnpstkeekerdklrakfdpiefeevdedeeeeeeqrseeeeeeeeedeeeeeseeeeeleskeksadee 417
                 v++   +++++   Rn + + +++++++++ ++  ++e + +d  e+ e+   +++e++ +  e e+++  ++ +s +k+ d++
  MMETSP1325-20131115|2223_1  11 VQQLVAQRIQLGgARNWTMSDSEDDEYVYSDYEDEDEESQGDDMMEDGEGGGGKGKESKSSARETEGAQGGDSYSSPSKGGDRN 94 
                 556666666664379999999*****************9999999999999999999999999999999999988888555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 1010.23
//
Query:       MMETSP1325-20131115|2227_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-08   31.6  12.4    8.1e-08   31.6   8.6    2.3  2  PF07699.8  GCC2 and GCC3
     0.0032   17.0   8.4      0.025   14.1   5.8    2.3  1  PF07562.9  Nine Cysteines Domain of family 3 GPCR
  ------ inclusion threshold ------
       0.02   13.4  16.4      0.022   13.2  11.4    1.1  1  PF03302.8  Giardia variant-specific surface protein
        1.1    9.2  11.5       0.53   10.2   2.0    2.7  2  PF00020.13 TNFR/NGFR cysteine-rich region
        4.4    6.9  13.8        2.2    7.9   0.9    3.3  3  PF12662.2  Complement Clr-like EGF-like


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.5    0.0032       8.8      13      22 ..      28      37 ..      16      40 .. 0.86
   2 !   31.6   8.6     3e-11   8.1e-08       1      43 [.      32      73 ..      32      75 .. 0.93

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0032
   PF07699.8 13 pCprGtYkne 22
                 Cp+G+Y+n+
  MMETSP1325-20131115|2227_1 28 VCPTGYYSNS 37
                6*******97 PP

  == domain 2    score: 31.6 bits;  conditional E-value: 3e-11
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsk 43
                G+y+++    C +Cp+++Y+++e++++C++C +g +T+++gs+
  MMETSP1325-20131115|2227_1 32 GYYSNSTC-SCMECPKNYYSDTEESVECTPCASGYHTEGTGSS 73
                88996666.********************************97 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   5.8   9.3e-06     0.025      24      52 ..      39      65 ..      26      67 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 9.3e-06
   PF07562.9 24 CCfdCvpCpegeisnetdettCkkCpeeq 52
                C  +C++Cp++ +s+++++++C++C +++
  MMETSP1325-20131115|2227_1 39 C--SCMECPKNYYSDTEESVECTPCASGY 65
                4..7*********************9875 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2  11.4   8.1e-06     0.022     259     330 ..      13      85 ..       3     114 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 8.1e-06
   PF03302.8 259 csegckectsstvcttcldGyvks.sdacakcdsscetctGaattcktcatGyyksatkevactssesdkgvt 330
                 + +g+++ ++ t+ + c  Gy  + + +c  c     + t ++ +c  ca+Gy+  +t+ + c   +sd++v 
  MMETSP1325-20131115|2227_1  13 VPPGAETNANHTAYSVCPTGYYSNsTCSCMECPKNYYSDTEESVECTPCASGYHTEGTGSSICVLKDSDDSVN 85 
                 457999999999999999998776478999999999999999999*********99**999999999998875 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   5.3    0.0011         3       1      32 [.      29      59 ..      29      60 .. 0.91
   2 ?   10.2   2.0   0.00019      0.53       1      24 [.      44      64 ..      44      70 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0011
                C-TTEEEESSCSEEEEEEE-B-T....TCEEEB--B CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCep....gtvlvspCt 32
                C+ g+Y++    ++C sC +C++    +t+++ +Ct
  MMETSP1325-20131115|2227_1 29 CPTGYYSN----STC-SCMECPKnyysDTEESVECT 59
                99999999....67*.*******9999999*****9 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00019
                C-TTEEEESSCSEEEEEEE-B-TT CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepg 24
                C++++Y+d +     ++C++C +g
  MMETSP1325-20131115|2227_1 44 CPKNYYSDTEES---VECTPCASG 64
                ********7664...556777665 PP

>> PF12662.2  Complement Clr-like EGF-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   1.5     0.011        30       6      19 ..      29      39 ..      28      40 .. 0.78
   2 ?    2.6   0.6     0.037     1e+02       3       8 ..      38      43 ..      37      43 .. 0.89
   3 ?    7.9   0.9   0.00079       2.2       3      16 ..      57      71 ..      55      88 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.011
   PF12662.2  6 CppGYqlspdGrsC 19
                Cp GY +++    C
  MMETSP1325-20131115|2227_1 29 CPTGYYSNST---C 39
                ******6554...7 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.037
   PF12662.2  3 tCsCpp 8 
                tCsC++
  MMETSP1325-20131115|2227_1 38 TCSCME 43
                8***96 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.00079
   PF12662.2  3 tCs.CppGYqlspdG 16
                 C+ C +GY+  + G
  MMETSP1325-20131115|2227_1 57 ECTpCASGYHTEGTG 71
                6999******33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 508.70
//
Query:       MMETSP1325-20131115|2229_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 653.12
//
Query:       MMETSP1325-20131115|2228_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0021   17.5   0.0     0.0031   17.0   0.0    1.1  1  PF10208.4  Degradation arginine-rich protein for mis-folding
  ------ inclusion threshold ------
      0.041   13.2   0.1      0.065   12.6   0.1    1.3  1  PF02037.22 SAP domain
      0.045   13.4   0.0      0.074   12.7   0.0    1.4  1  PF07498.7  Rho termination factor, N-terminal domain


Domain annotation for each model (and alignments):
>> PF10208.4  Degradation arginine-rich protein for mis-folding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   6.7e-07    0.0031     102     140 ..      12      50 ..       9      59 .. 0.90

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 6.7e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF10208.4 102 vdlkklkvkelkkilaeWgeeckgcleksdfikkieelk 140
                  dl+ l +k+lk + ++ g + +gc+ek d i+++++  
  MMETSP1325-20131115|2228_1  12 DDLNELPIKQLKALARDNGVSLDGCAEKRDIIERLRNAG 50 
                 69999*****************************98765 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.4e-05     0.065       2      34 ..      15      49 ..      14      49 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.4e-05
                TT--HHHHHHHHHHTT------..HHHHHHHHHHH CS
  PF02037.22  2 skltVaeLKaeLkkrGLptsGk..KaeLieRLkeh 34
                + l +++LKa+++  G +  G   K ++ieRL+++
  MMETSP1325-20131115|2228_1 15 NELPIKQLKALARDNGVSLDGCaeKRDIIERLRNA 49
                667889**************************985 PP

>> PF07498.7  Rho termination factor, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.6e-05     0.074       1      34 [.      13      46 ..      13      54 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.6e-05
   PF07498.7  1 eLkektleeLreiAkelgienysrlrKqeLIfaI 34
                +L e+++++L+++A++ g++  +   K ++I+ +
  MMETSP1325-20131115|2228_1 13 DLNELPIKQLKALARDNGVSLDGCAEKRDIIERL 46
                89*****************966667777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 596.99
//
Query:       MMETSP1325-20131115|2230_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-15   54.4   7.1    1.4e-05   24.0   0.0    4.1  4  PF00805.17 Pentapeptide repeats (8 copies)
    8.5e-14   51.0   0.6    1.5e-10   40.6   0.1    2.2  2  PF13599.1  Pentapeptide repeats (9 copies)
    3.7e-11   42.6   2.5    0.00025   20.7   0.1    3.2  3  PF13576.1  Pentapeptide repeats (9 copies)


Domain annotation for each model (and alignments):
>> PF00805.17  Pentapeptide repeats (8 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   1.7e-05     0.079      10      37 ..     113     140 ..     112     143 .. 0.78
   2 !   18.6   0.1   1.6e-07   0.00071       8      39 ..     141     172 ..     140     173 .. 0.94
   3 !   24.0   0.0   3.1e-09   1.4e-05       3      36 ..     161     194 ..     161     195 .. 0.95
   4 !   21.4   0.3     2e-08   9.3e-05       1      39 [.     174     213 ..     174     214 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.7e-05
  PF00805.17  10 gAdLrgadLsgAdLtgAnLsgAnLsgan 37 
                 g+ L++a++ g dLtg+ ++    +g  
  MMETSP1325-20131115|2230_1 113 GVQLDKANFAGEDLTGVSFQQSQIRGGV 140
                 5668999999999999999987777755 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 1.6e-07
  PF00805.17   8 LrgAdLrgadLsgAdLtgAnLsgAnLsganls 39 
                 +++++L ga + +A+L  +++ gA+++++nl+
  MMETSP1325-20131115|2230_1 141 FEKTKLLGASFFDATLDDSTFVGADMRQVNLE 172
                 68899*************************97 PP

  == domain 3    score: 24.0 bits;  conditional E-value: 3.1e-09
  PF00805.17   3 LsgAnLrgAdLrgadLsgAdLtgAnLsgAnLsga 36 
                 ++gA+ r+++L++a L +AdL++A ++ A  +ga
  MMETSP1325-20131115|2230_1 161 FVGADMRQVNLEMASLVNADLRNAVITEAYVTGA 194
                 789***************************9998 PP

  == domain 4    score: 21.4 bits;  conditional E-value: 2e-08
  PF00805.17   1 anLsgAnLrgAdLrgadLsgAd.LtgAnLsgAnLsganls 39 
                 a L++A+Lr+A  ++a  +gA+ + +An++gA+++++ l+
  MMETSP1325-20131115|2230_1 174 ASLVNADLRNAVITEAYVTGATsFENANIEGADFTDTYLR 213
                 7899999999999999999995599999999999999887 PP

>> PF13599.1  Pentapeptide repeats (9 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.1   3.3e-14   1.5e-10       9      78 .]     112     181 ..     107     181 .. 0.94
   2 !   10.4   0.0   8.8e-05       0.4      21      53 ..     179     211 ..     178     219 .. 0.55

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 3.3e-14
   PF13599.1   9 sncklkgvnFsgaelkncnFeecklfkevnFsncdlkdadfseadlknasFsncdlknvdfs.gklkdadf 78 
                  +++l+++nF+g +l+++ F+++++    +F++++l  a+f++a+l +++F++ d+++v+++ ++l++ad+
  MMETSP1325-20131115|2230_1 112 RGVQLDKANFAGEDLTGVSFQQSQI-RGGVFEKTKLLGASFFDATLDDSTFVGADMRQVNLEmASLVNADL 181
                 5899********************8.8**********************************8469**9985 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 8.8e-05
   PF13599.1  21 aelkncnFeecklfkevnFsncdlkdadfsead 53 
                 a+l+n++++e+    +++F+n++++ adf+++ 
  MMETSP1325-20131115|2230_1 179 ADLRNAVITEAYVTGATSFENANIEGADFTDTY 211
                 455555555555444455555555555555554 PP

>> PF13576.1  Pentapeptide repeats (9 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.2   1.9e-07   0.00087       3      44 ..     118     161 ..     116     175 .. 0.53
   2 !   14.7   0.1   4.2e-06     0.019       3      38 ..     148     181 ..     141     189 .. 0.74
   3 !   20.7   0.1   5.6e-08   0.00025       2      37 ..     177     211 ..     176     215 .. 0.86

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 1.9e-07
   PF13576.1   3 gaeFsgsadFsnatFngsa....sFsnatFgnadFsgatFtgdvdF 44 
                 +a+F g  d++++ F++s+     F+++++ +a+F +at + d++F
  MMETSP1325-20131115|2230_1 118 KANFAGE-DLTGVSFQQSQirggVFEKTKLLGASFFDATLD-DSTF 161
                 5677777.777777777753222244444444444444444.4444 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 4.2e-06
   PF13576.1   3 gaeFsgsadFsnatFngsasFsnatFgnadFsgatF 38 
                 ga+F ++ +++++tF g+ ++++++++ a++ +a  
  MMETSP1325-20131115|2230_1 148 GASFFDA-TLDDSTFVGA-DMRQVNLEMASLVNADL 181
                 5677777.7778888888.88888888888887765 PP

  == domain 3    score: 20.7 bits;  conditional E-value: 5.6e-08
   PF13576.1   2 sgaeFsgsadFsnatFngsasFsnatFgnadFsgat 37 
                 ++a ++++   ++a  +g++sF+na++++adF+++ 
  MMETSP1325-20131115|2230_1 177 VNADLRNA-VITEAYVTGATSFENANIEGADFTDTY 211
                 68888999.99999999999************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 1017.40
//
Query:       MMETSP1325-20131115|2233_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.37s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 159.76
//
Query:       MMETSP1325-20131115|2234_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 502.31
//
Query:       MMETSP1325-20131115|2224_1  [L=521]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-47  159.4   0.0    2.6e-40  137.2   0.0    2.4  2  PF01077.17 Nitrite and sulphite reductase 4Fe-4S domain
    1.5e-26   91.7   0.2      1e-14   53.7   0.0    2.8  3  PF03460.12 Nitrite/Sulfite reductase ferredoxin-like half domain


Domain annotation for each model (and alignments):
>> PF01077.17  Nitrite and sulphite reductase 4Fe-4S domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.2   0.0   3.8e-44   2.6e-40       5     156 ..      94     277 ..      90     278 .. 0.85
   2 !   20.1   0.0   4.1e-08   0.00028      50     150 ..     423     516 ..     378     521 .] 0.83

  Alignments for each domain:
  == domain 1    score: 137.2 bits;  conditional E-value: 3.8e-44
                 EEEEE--TT--SBSS-SS-THHHHHHHH.........................HHHHHHHCGSSSSS-EEEEE-SSTT--S-GGGSSEEEE----S----.--EEEE-----SSSS--EEEEEE....CE----HHHHHHHHHHHHHH....HCSGCC-SHHHHHHH---HHHHHHHHHTTSCG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01077.17   5 lrnvklcpgaglceeallDttelakale.........................deledeygrtalPrKfKiavsgcpnncvaveanDigivgvekdeiei.gfnilvGGkagrthgakktlarl....gfvpeedvievveaivevyr..gdrknrkkeRlkylierlGlekfrekveeelgkk 156
                 + +  + p++++  e +l + ++ak +                           + e+ yg+t+lPrKfK+av+++ +n+v+ +++Dig+v++++d+  + gfn++vGG++grth++++t+ar+    gfv+++d++ev++ai+  +r  g+r+ r+++R+kyl++ lG++ fr+ ve++lgk+
  MMETSP1325-20131115|2224_1  94 VMAELFKPASTAFSELWLGEDKVAKVEYwrkdiddagviaaanydngrgiiipGAAEPLYGETYLPRKFKMAVTVPGDNSVDIYISDIGLVVITDDNEDLlGFNVMVGGGMGRTHNKETTFARAadhlGFVDKDDILEVCKAILAAQRdhGNREIRANARMKYLVHSLGIDGFRSLVESYLGKP 277
                 555666666666666666665555555555555555555555566666666667889**************************************999988********************************************************************************986 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 4.1e-08
                 EEE-SSTT--S-GGGSSEEEE----S------EEEE-----SSSS--EEEEEECE----HHHHHHHHHHHHHH..HCSGCC-SHHHHHHH---HHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01077.17  50 iavsgcpnncvaveanDigivgvekdeieigfnilvGGkagrthgakktlarlgfvpeedvievveaivevyrgdrknrkkeRlkylierlGlekfrekve 150
                 + ++gcpn c++ ++  +++vg   +     ++++vGG+   + + +  ++  g v+++++ + +e ++  ++  +   + e ++++ +r+G + + e + 
  MMETSP1325-20131115|2224_1 423 MRMTGCPNGCARPYMAELAFVGEGVK----TYQVWVGGSPVLEGRTGWPYK--GKVKDKNMEATIEPLLVNWK-TNRLDATEAFGDFCHRVGQDALEEYAS 516
                 6789*****************98883....699*****************9..99***99*************.777778889999999999887776555 PP

>> PF03460.12  Nitrite/Sulfite reductase ferredoxin-like half domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   1.5e-18     1e-14      13      68 ..       2      57 ..       1      58 [. 0.96
   2 ?   -1.9   0.0      0.35   2.4e+03      18      42 ..     221     249 ..     208     253 .. 0.73
   3 !   35.0   0.0   1.1e-12   7.2e-09       1      69 []     296     365 ..     296     365 .. 0.91

  Alignments for each domain:
  == domain 1    score: 53.7 bits;  conditional E-value: 1.5e-18
  PF03460.12 13 rlrvpnGritaeqlraladiaekygsgeirlTtrQnlqlhgvpeedleeileeLae 68
                rl+vp+G +t+e++r l d++++yg g++r TtrQ +qlhgv + dl+++ +++ e
  MMETSP1325-20131115|2224_1  2 RLKVPCGEVTPELYRLLDDLSDQYGQGDLRATTRQAWQLHGVLKGDLKTVVSKIME 57
                89************************************************998765 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.35
  PF03460.12  18 nGritaeqlraladia....ekygsgeir 42 
                  G ++ +   ++++ +    +++g+ eir
  MMETSP1325-20131115|2224_1 221 LGFVDKDDILEVCKAIlaaqRDHGNREIR 249
                 57777777777777666676888888887 PP

  == domain 3    score: 35.0 bits;  conditional E-value: 1.1e-12
  PF03460.12   1 hkqkdgkgyymvrlrvpnGritae....qlraladiaekygsgeirlTtrQnlqlhgvpeedleeileeLaea 69 
                 h+q d  g  +++l+v nGr+  +    +++ l+ + +++ +g+  lT+ Q+++l +++++d++ i+++Lae+
  MMETSP1325-20131115|2224_1 296 HEQGD--GRLFLGLNVDNGRVKDDgdfrLKTCLRVLTDTFDIGH-VLTPTQSIILKDIKPADRPGIEAILAEH 365
                 45555..558***********77779***************999.9************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.83u 0.36s 00:00:01.19 Elapsed: 00:00:00.71
# Mc/sec: 1758.45
//
Query:       MMETSP1325-20131115|2236_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.71
# Mc/sec: 604.15
//
Query:       MMETSP1325-20131115|2239_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.62
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|2243_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   13.0   1.7       0.17   12.5   1.1    1.3  1  PF13432.1 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.1   1.2e-05      0.17       3      56 ..      18      73 ..      16      80 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.2e-05
   PF13432.1  3 lArallraGdydeAlaaleaalalaPeaaeallllaeall.rlgrldeAa.allra 56
                +A+++l aG+++  l+ + +al ++   a+a+l  aeall + g+l+ Aa a  ++
  MMETSP1325-20131115|2243_1 18 QADDYLMAGRVAVMLRGFGDALHQPRSTAQAWLPFAEALLrEEGELPPAApAEVQR 73
                899*************************************555******9877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.76
# Mc/sec: 334.23
//
Query:       MMETSP1325-20131115|2244_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 415.97
//
Query:       MMETSP1325-20131115|2245_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-05   22.4   0.3    0.00012   21.7   0.2    1.3  1  PF00397.21 WW domain
  ------ inclusion threshold ------
       0.22   10.9   1.3         10    5.6   0.0    2.6  3  PF09607.5  Brinker DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.2   1.7e-08   0.00012       4      31 .]      76     103 ..      73     103 .. 0.81

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 1.7e-08
                 SEE.E.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21   4 gWe.ersddd.dGrvYYyNheTgetqWekP 31 
                 gW  +    + +++ YYy+ ++ge +W  P
  MMETSP1325-20131115|2245_1  76 GWSrALC--PeTQQEYYYHDSSGEVTWQMP 103
                 8984555..556***************988 PP

>> PF09607.5  Brinker DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0015        10      31      47 ..      27      43 ..      19      46 .. 0.90
   2 ?    4.0   0.0    0.0046        32      12      33 ..      45      66 ..      43      88 .. 0.87
   3 ?   -1.4   0.1      0.23   1.6e+03      16      21 ..      88      93 ..      73      96 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0015
   PF09607.5 31 vAkkynisrknvekWlq 47
                +Ak   i +k v++Wl 
  MMETSP1325-20131115|2245_1 27 AAKELKIGKKGVQEWLD 43
                89999**********95 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0046
   PF09607.5 12 LqvvesfesdndCkGdyRAvAk 33
                L + +s++ dn+  Gd  A A 
  MMETSP1325-20131115|2245_1 45 LSAADSANPDNASTGDADAQAS 66
                6788************999986 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.23
   PF09607.5 16 esfesd 21
                e++++d
  MMETSP1325-20131115|2245_1 88 EYYYHD 93
                789998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 511.53
//
Query:       MMETSP1325-20131115|2246_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.099   12.2   0.0       0.11   12.0   0.0    1.1  1  PF00238.14 Ribosomal protein L14p/L23e


Domain annotation for each model (and alignments):
>> PF00238.14  Ribosomal protein L14p/L23e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   8.4e-06      0.11      42      90 ..      11      58 ..       5      79 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.4e-06
                EEEE-----------EEEEEEEE-SS-EE-----EEE-SS-EEEEB--- CS
  PF00238.14 42 svkkaapkgkvkkgdvvkavvVrtkkevrrkdgsvikfddNavVlinkk 90
                +v+ka ++  vk ++ ++a+v++++k+ +  +g + + +d  + l+++ 
  MMETSP1325-20131115|2246_1 11 VVQKA-EQALVKIEEKHEAMVIQQQKQAELGNGNIAAIEDQLIALLKDG 58
                67777.677888899*************************999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1166  (0.0852838); expected 273.4 (0.02)
Passed bias filter:                      891  (0.0651697); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.45s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 427.92
//
Query:       MMETSP1325-20131115|2248_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-09   35.6   0.0    8.6e-09   34.9   0.0    1.3  1  PF00134.18 Cyclin, N-terminal domain
    1.1e-07   32.2   0.0    1.7e-07   31.6   0.0    1.2  1  PF08613.6  Cyclin


Domain annotation for each model (and alignments):
>> PF00134.18  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.0   1.3e-12   8.6e-09      33     124 ..      25     117 ..      11     118 .. 0.93

  Alignments for each domain:
  == domain 1    score: 34.9 bits;  conditional E-value: 1.3e-12
                 HHHHHHHHHHHCTT--CCCHHHHHHHHHHHHCC-...--CCCCTT---HHHHHHHCCC-SS---CHHHHCHTTSSS-CCHHHHHHHHHHHHCTT CS
  PF00134.18  33 ilidwlvevsekfklspetlylavnyldRflskr.s.vkrkklqlvgvtcLllAaKveeirppeledlvyitdgaytkeeilqmErliLstLnf 124
                  +  w++++ +  k+s e+ ++a  y++R l+   +     +++ v + +L+lA Kv +++ ++ + +  i+   y+k++i + E  +L+ L++
  MMETSP1325-20131115|2248_1  25 DIYAWIFKIYSAAKMSAECNIIALIYINRSLALSgMpLGAFNWRPVTLIALILAQKVWDDTSVRASCFSSICP-EYSKDQIKRYEIAFLRNLEY 117
                 5789*************************9988863599********************************94.6*****************98 PP

>> PF08613.6  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   2.6e-11   1.7e-07      53     147 ..      25     117 ..      12     118 .. 0.91

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 2.6e-11
                 -HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH..H-TT---STTTHHHHHHHHHHHHH----SS---HHHHHH--.---HHHHHHHHHHHHHHTTT CS
   PF08613.6  53 slgsylsrlqkfgesaplvllgaliYldrivkrcdkeassvtsanvyRLllvallvatKflvDlsysnekfakvg.gislkeLnkLEidFlflvdF 147
                 ++ +++ ++ + ++++  + + aliY++r         + + ++n++  +l+al+ a K+ +D s+  ++f+ +  + s +++ + Ei Fl  +++
  MMETSP1325-20131115|2248_1  25 DIYAWIFKIYSAAKMSAECNIIALIYINRSLA---LSGMPLGAFNWRPVTLIALILAQKVWDDTSVRASCFSSICpEYSKDQIKRYEIAFLRNLEY 117
                 6889999**********************998...778899*******************************986489999**********99888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.32s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 773.56
//
Query:       MMETSP1325-20131115|2250_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|2253_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|2235_1  [L=415]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-05   22.6   0.0    0.00027   21.0   0.0    1.8  1  PF00169.24 PH domain
  ------ inclusion threshold ------
      0.031   14.2   0.1      0.067   13.1   0.0    1.5  1  PF13989.1  YejG-like protein


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   3.9e-08   0.00027       5     100 ..      31     117 ..      29     120 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 3.9e-08
                 EEEEEEETSSSCEEEEEEEEET...TEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHH CS
  PF00169.24   5 GyllkksellktwkkryfvLts...nyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalk 100
                 G+l+k ++ +k+wk+ryf +     + L+y ++ +     +  gsi +n+ t+ + ++        ++  f i+   ++ yll+a s  e+++W++ l 
  MMETSP1325-20131115|2235_1  31 GWLSKEGHIFKNWKNRYFAFLKghnGDLSYLDDVN----GNVAGSIKMNGSTLLEFDE--------DPLQFGIQEAGGTVYLLKAQSRGEVEAWIHGLA 117
                 9*****************988879999*******6....9************999998........59***************************9886 PP

>> PF13989.1  YejG-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   9.8e-06     0.067      17      85 ..     117     188 ..     111     196 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 9.8e-06
   PF13989.1  17 sgfvgvkvevlpe.eeasednsliglkllsh..dgeealevlkklkeslaeiqvesaivewegepCLfvkre 85 
                 + ++g kv +++  e+ +++n++ig  + sh  ++++a ++l + + +l+++ ++++ +  e++  Lf+++ 
  MMETSP1325-20131115|2235_1 117 AQMAGNKVIQMHVpEDYKKNNDIIGALVRSHstNSQNAYAALLEHQATLKDLALNAEFAAEEKKDELFIHTM 188
                 456788887776659999*******87777722567889999999************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       576  (0.0421299); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.34s 00:00:01.08 Elapsed: 00:00:00.66
# Mc/sec: 1506.80
//
Query:       MMETSP1325-20131115|2251_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       671  (0.0490784); expected 273.4 (0.02)
Passed bias filter:                      490  (0.0358397); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.78u 0.36s 00:00:01.14 Elapsed: 00:00:00.72
# Mc/sec: 1327.98
//
Query:       MMETSP1325-20131115|2256_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.68
# Mc/sec: 429.93
//
Query:       MMETSP1325-20131115|2257_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-09   37.7   0.2    3.8e-09   36.7   0.1    1.4  1  PF13519.1  von Willebrand factor type A domain
    5.4e-05   22.8   0.0    0.00065   19.3   0.0    2.0  1  PF00092.23 von Willebrand factor type A domain
    0.00054   19.5   0.3      0.002   17.6   0.1    1.8  2  PF13768.1  von Willebrand factor type A domain
      0.009   15.0   0.0      0.014   14.4   0.0    1.4  1  PF05762.9  VWA domain containing CoxE-like protein


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.1   1.1e-12   3.8e-09      77     158 ..      12     138 ..       4     150 .. 0.72

  Alignments for each domain:
  == domain 1    score: 36.7 bits;  conditional E-value: 1.1e-12
   PF13519.1  77 gggtnlaaalalalellakad.grraaivlvtDG..................ednssdieaas....................................alkragikiyvvgvgsdegaeallkelaeatggryfda 158
                 gg t +a a+a+a  l+++ + +++++iv+vtDG                            s                                    a+k  + ++++v++g+  +a + +++l++a ggr + +
  MMETSP1325-20131115|2257_1  12 GGRTVYASAMAEAESLVNAYPaDQKTVIVFVTDGpstsdyehlyddaalaqsI---------SgqaegeltvntsaprhedesvvkdvaeaaaiakklrAAKGDKFQLHTVAFGPAASA-ERMEQLSRAAGGRTHVV 138
                 788***************997688999*******6666655555555555550.........1445555555555555555555555555556666555889999**********9987.9***********97766 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.9e-07   0.00065      72     154 ..       8      91 ..       4     150 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 1.9e-07
                 GGSTTS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE-----C---STHHHHHHHHHH.....GEEEEEEEE--SCCCHHHHHHCS CS
  PF00092.23  72 lkylgggtntgkALkyalenlfssaagsrenapkvvillTDGksndggspeaaaaklrek.....klgitvfgvGvsdvdeeelrsia 154
                 l+ +gg t  ++A+  a + ++       ++ + v++++TDG s+++ +    +a+l+++     +  +tv + + ++ de+ +++ a
  MMETSP1325-20131115|2257_1   8 LPFSGGRTVYASAMAEAESLVNAY----PADQKTVIVFVTDGPSTSDYEHLYDDAALAQSisgqaEGELTVNTSAPRHEDESVVKDVA 91 
                 5678999*************9998....889999****************99999999998888855555555555555555555555 PP

>> PF13768.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.19   6.6e+02      84     113 ..      20      51 ..       7      93 .. 0.59
   2 !   17.6   0.1   5.9e-07     0.002     112     155 ..      92     136 ..      82     137 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.19
   PF13768.1  84 aLkealrqp.akpgearhvllls.dgsstsga 113
                 a++ea +   a+p+  ++v+++  dg sts+ 
  MMETSP1325-20131115|2257_1  20 AMAEAESLVnAYPADQKTVIVFVtDGPSTSDY 51 
                 44444432245555566655543266655533 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 5.9e-07
   PF13768.1 112 gaervlqliraaa.rkirifalglgetlsadmlqeLAeaggGsye 155
                  a+ + + +raa+  k++++++++g+ +sa+ +++L++a gG+ +
  MMETSP1325-20131115|2257_1  92 EAAAIAKKLRAAKgDKFQLHTVAFGPAASAERMEQLSRAAGGRTH 136
                 5677889999999667**************************987 PP

>> PF05762.9  VWA domain containing CoxE-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0     4e-06     0.014     127     170 ..      12      56 ..       6     108 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 4e-06
   PF05762.9 127 gGgTrigealaeflelvtrpal.rravvvivSDglergdseelee 170
                 gG T +++a+ae+ +lv+     +++v+v v+Dg+ + d e l +
  MMETSP1325-20131115|2257_1  12 GGRTVYASAMAEAESLVNAYPAdQKTVIVFVTDGPSTSDYEHLYD 56 
                 799**************999899**************99998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.76
# Mc/sec: 608.55
//
Query:       MMETSP1325-20131115|2258_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       524  (0.0383265); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.72
# Mc/sec: 199.70
//
Query:       MMETSP1325-20131115|2259_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   20.7   0.2    0.00056   19.6   0.0    1.7  2  PF02985.17 HEAT repeat
  ------ inclusion threshold ------
      0.035   14.2   0.0      0.049   13.8   0.0    1.3  1  PF13646.1  HEAT repeats


Domain annotation for each model (and alignments):
>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   8.1e-08   0.00056       1      30 [.      11      40 ..      11      41 .. 0.95
   2 ?   -2.6   0.0       1.1   7.8e+03      19      27 ..      50      58 ..      49      60 .. 0.71

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 8.1e-08
                HHHHHHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17  1 llPlllkllnDpspeVReaAaeaLgalaev 30
                ++  l++++++ + + R  A+e+Lg++ae 
  MMETSP1325-20131115|2259_1 11 IMQNLCEACQSANMQTRVKALECLGRIAEL 40
                7999************************96 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.1
                HHHHHHHHH CS
  PF02985.17 19 aAaeaLgal 27
                +A++ L+++
  MMETSP1325-20131115|2259_1 50 QAIWGLTTV 58
                688888765 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   7.1e-06     0.049      34      66 ..      13      47 ..       6      65 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 7.1e-06
   PF13646.1 34 paLlelLkdsdpevRraAaeaLgklgd..pealpa 66
                + L e++++ +  +R +A+e+Lg++++   + lpa
  MMETSP1325-20131115|2259_1 13 QNLCEACQSANMQTRVKALECLGRIAElyYKHLPA 47
                66888999999999999999999997433333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      430  (0.0314511); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|2260_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|2261_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.41s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 216.14
//
Query:       MMETSP1325-20131115|2262_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-07   28.7   0.6     0.0042   17.0   0.1    2.3  3  PF13499.1  EF-hand domain pair
    0.00043   19.2   0.6     0.0042   16.1   0.1    2.6  3  PF00036.27 EF hand
    0.00055   19.4   1.5     0.0094   15.6   0.5    2.8  3  PF13405.1  EF-hand domain
    0.00075   18.6   0.5      0.016   14.4   0.1    2.9  3  PF13202.1  EF hand
     0.0022   17.4   0.1       0.39   10.2   0.0    2.8  3  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.7e-06    0.0074      22      63 ..       6      47 ..       1      50 [. 0.77
   2 !   17.0   0.1   1.5e-06    0.0042       2      64 ..      26     104 ..      25     106 .. 0.73
   3 ?    2.6   0.0     0.049   1.3e+02      13      25 ..      93     105 ..      90     114 .. 0.62

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 2.7e-06
   PF13499.1 22 LlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63
                ++r+l +l+   ++++ +  l + fk  D +gdG+l ++++ 
  MMETSP1325-20131115|2262_1  6 FKRFLEGLSLFNTPGQRDAKLAAAFKIQDFDGDGKLGRQDLI 47
                4455555555555999999999***************99986 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 1.5e-06
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels............deevrevldyifkelDkn....gdGvlsfeEflq 64 
                 l  aFk  D dgdg+l +++L  +++++   +             +++   ++d++++e+ +     + + +++++f+ 
  MMETSP1325-20131115|2262_1  26 LAAAFKIQDFDGDGKLGRQDLILYFRRIVLFQDaltpqmdgalskEKQAAAIADKVLGEASSSpehdKERWITMDDFRR 104
                 6779**********************99988778888887766554444446666666555544444677777777775 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.049
   PF13499.1  13 gdgyldkeeLlrl 25 
                 +  ++++++++r+
  MMETSP1325-20131115|2262_1  93 KERWITMDDFRRI 105
                 3345555555554 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.5   4.1e+03      16      22 ..       3       9 ..       1      14 [. 0.59
   2 !   16.1   0.1   1.5e-06    0.0042       2      28 ..      26      52 ..      25      53 .. 0.89
   3 ?    0.4   0.0      0.17   4.5e+02      17      27 ..      97     107 ..      92     109 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.5
                EBEHHHH CS
  PF00036.27 16 kIsfeEf 22
                +Isf+ f
  MMETSP1325-20131115|2262_1  3 TISFKRF 9 
                6777644 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 1.5e-06
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                l  aFk+ D DgdGk+  ++++ ++++
  MMETSP1325-20131115|2262_1 26 LAAAFKIQDFDGDGKLGRQDLILYFRR 52
                5689*****************998876 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.17
                 BEHHHHHHHHH CS
  PF00036.27  17 IsfeEfkealk 27 
                 I+ ++f+++++
  MMETSP1325-20131115|2262_1  97 ITMDDFRRIVA 107
                 899****9975 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.1   3.1e+03      14      27 ..       1      14 [.       1      17 [. 0.72
   2 !   15.6   0.5   3.4e-06    0.0094       2      28 ..      26      52 ..      25      66 .. 0.87
   3 ?    1.1   0.0      0.16   4.4e+02      16      26 ..      96     106 ..      91     110 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.1
                ---B---HHHHHHH CS
   PF13405.1 14 dGkidaeELrdaLr 27
                d +i+++ ++  L+
  MMETSP1325-20131115|2262_1  1 DQTISFKRFLEGLS 14
                56788888877765 PP

  == domain 2    score: 15.6 bits;  conditional E-value: 3.4e-06
                HH---GCC-------B---HHHHHHH. CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrk 28
                l +aFk+ D+dgdGk+ +++L+  +r+
  MMETSP1325-20131115|2262_1 26 LAAAFKIQDFDGDGKLGRQDLILYFRR 52
                6689*****************998885 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.16
                 -B---HHHHHH CS
   PF13405.1  16 kidaeELrdaL 26 
                  i+ +++r++ 
  MMETSP1325-20131115|2262_1  96 WITMDDFRRIV 106
                 59*****9985 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   5.8e-06     0.016       3      21 ..      28      46 ..      26      54 .. 0.85
   2 ?    0.2   0.0      0.18     5e+02      13      19 ..      65      71 ..      64      71 .. 0.90
   3 ?   -0.6   0.0      0.32   8.6e+02      16      24 ..      97     105 ..      97     106 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5.8e-06
                HHHHHH--S----B-HHHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreEL 21
                ++F+  D++gDGk+ r++L
  MMETSP1325-20131115|2262_1 28 AAFKIQDFDGDGKLGRQDL 46
                679999********99998 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.18
                ---B-HH CS
   PF13202.1 13 DGkIsre 19
                DG +s+e
  MMETSP1325-20131115|2262_1 65 DGALSKE 71
                9****98 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.32
                 B-HHHHHHH CS
   PF13202.1  16 IsreELkrl 24 
                 I++++++r+
  MMETSP1325-20131115|2262_1  97 ITMDDFRRI 105
                 788999986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00014      0.39       4      48 ..       3      47 ..       1      53 [. 0.71
   2 ?   -1.4   0.0      0.59   1.6e+03      38      45 ..      64      71 ..      56      78 .. 0.74
   3 ?    4.1   0.0     0.012        32       5      14 ..      97     106 ..      96     113 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00014
   PF13833.1  4 lItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFc 48
                 I+++ + + l+l+ ++g  + ++ + f+  D+dgdGk++  + +
  MMETSP1325-20131115|2262_1  3 TISFKRFLEGLSLFNTPGQRDAKLAAAFKIQDFDGDGKLGRQDLI 47
                566666666555554444567779999************987765 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.59
   PF13833.1 38 gdGkisfe 45
                 dG++s+e
  MMETSP1325-20131115|2262_1 64 MDGALSKE 71
                47777765 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.012
   PF13833.1   5 ItreeLkral 14 
                 It+++++r++
  MMETSP1325-20131115|2262_1  97 ITMDDFRRIV 106
                 9*******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|2263_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 682.74
//
Query:       MMETSP1325-20131115|2266_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.74    9.4   3.4        8.7    5.9   0.2    2.3  2  PF12151.3  Mannan-binding protein


Domain annotation for each model (and alignments):
>> PF12151.3  Mannan-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1    0.0024        33       6      19 ..      16      30 ..      15      31 .. 0.90
   2 ?    5.9   0.2   0.00064       8.7       6      19 ..      49      63 ..      48      64 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0024
                H---HHHHCT--E.E CS
   PF12151.3  6 avCPtvCaalgge.W 19
                + +P+ C +l+++ W
  MMETSP1325-20131115|2266_1 16 TLAPSSCNTLTTStW 30
                789********9988 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.00064
                H---HHHHCT--E.E CS
   PF12151.3  6 avCPtvCaalgge.W 19
                + +P+ C++l+++ W
  MMETSP1325-20131115|2266_1 49 TLAPSACSTLTTSaW 63
                789********9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|2264_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   14.0   2.2       0.03   13.7   1.1    1.6  1  PF07323.7  Protein of unknown function (DUF1465)
      0.035   14.1   0.0      0.059   13.4   0.0    1.3  1  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
      0.048   13.0   0.1      0.072   12.5   0.0    1.2  1  PF00517.12 Retroviral envelope protein
       0.06   12.8   0.6      0.079   12.4   0.4    1.2  1  PF08657.5  DASH complex subunit Spc34
       0.07   13.3   6.3       0.25   11.5   4.4    1.6  1  PF08232.7  Striatin family
        0.1   12.9   0.5        0.1   12.9   0.4    2.2  2  PF13600.1  N-terminal domain of unknown function (DUF4140)
        0.1   12.8   3.9        5.9    7.2   0.2    2.4  2  PF04102.7  SlyX
       0.13   11.8   0.7        6.4    6.4   0.0    2.5  2  PF09006.6  Lung surfactant protein D coiled-coil trimerisation
       0.13   12.0   3.5      0.084   12.6   1.1    1.6  1  PF11559.3  Afadin- and alpha -actinin-Binding
       0.74    9.2   9.6       0.25   10.7   3.9    1.9  2  PF01391.13 Collagen triple helix repeat (20 copies)
        0.9    9.0   3.7        1.2    8.6   2.6    1.1  1  PF03962.10 Mnd1 family
        3.4    7.3   6.0        0.5    9.9   0.8    1.9  2  PF07544.8  RNA polymerase II transcription mediator complex subunit 9
        4.3    6.7   7.5       0.56    9.6   1.4    1.9  2  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF07323.7  Protein of unknown function (DUF1465)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.1   2.9e-05      0.03      93     148 ..      77     131 ..      57     152 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.9e-05
   PF07323.7  93 ldeaseedaaevaelpeelreLverserLeervarLdeelreeaeaaeeenpvseq 148
                  +++ +++  +v +l +e+r+L +r ++Le+rv+ L+e l++ea +++++ p++++
  MMETSP1325-20131115|2264_1  77 PRQF-KKQRIQVPDLRDEVRALEARVRALEARVRALEEWLKREADKQAQAGPAAKK 131
                 4555.477888999*****************************9999998887765 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   5.6e-05     0.059      61      97 ..      80     116 ..      76     124 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 5.6e-05
   PF10046.4  61 lkpylqqideieeqvtkLeeavkeLDeyskeLEsKvk 97 
                 +k++  q+ +++++v++Le+ v+ L++ + +LE+ +k
  MMETSP1325-20131115|2264_1  80 FKKQRIQVPDLRDEVRALEARVRALEARVRALEEWLK 116
                 4555555555566666666666666666666665444 PP

>> PF00517.12  Retroviral envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.8e-05     0.072      30      67 ..      83     120 ..      77     126 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.8e-05
  PF00517.12  30 qeqidkllelringlenvVlvlgarVtalekyleiqaq 67 
                 q+ +   l++ + +le++V+ l+arV ale+ l+ +a+
  MMETSP1325-20131115|2264_1  83 QRIQVPDLRDEVRALEARVRALEARVRALEEWLKREAD 120
                 556666789999*******************9998776 PP

>> PF08657.5  DASH complex subunit Spc34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.4   7.6e-05     0.079     174     257 ..      74     161 ..      59     167 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.6e-05
   PF08657.5 174 dkYPll..gakekieklrqkyeelseeiaeleeeiaeqkdqLeklnksesskssde..eeaeeaeedkvdidelIekEeeeIreLErq 257
                 +++P +  + + ++  lr++ + l+++++ le++++  ++ L++++  + +  +     + ++++ +     +l++ E  e ++ E++
  MMETSP1325-20131115|2264_1  74 RVWPRQfkKQRIQVPDLRDEVRALEARVRALEARVRALEEWLKREADKQAQAGPAAkkGQRRRSPAEIRKQMALLQAELRESENAESE 161
                 7899885555666789***************************998877776444322333666655556667777777776665555 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   4.4   0.00024      0.25      31     110 ..      84     161 ..      81     166 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00024
   PF08232.7  31 karIakLeGerrglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaeeeeleekkdeesessakdeke 110
                 + ++  L  e+r le+  + L  rv+ Le+ lk+e  k  ++  ++++   q++ s+ae  ++ +  ++e  +s+++e+e
  MMETSP1325-20131115|2264_1  84 RIQVPDLRDEVRALEARVRALEARVRALEEWLKREADKQAQAGPAAKKG--QRRRSPAEIRKQMALLQAELRESENAESE 161
                 4567789****************************99977755555555..44444444444433333333333333333 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.4   9.7e-05       0.1      51      98 ..      68     113 ..      58     117 .. 0.79
   2 ?    0.6   1.5      0.65   6.8e+02      68      93 ..     134     159 ..     117     167 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.7e-05
   PF13600.1  51 lsvsvrrrdlqekdadaaseelaeleaelraledelarleaekealea 98 
                  +++++r++++  + +++  ++  l++e+rale+++++lea+  ale 
  MMETSP1325-20131115|2264_1  68 DDLACARVWPR--QFKKQRIQVPDLRDEVRALEARVRALEARVRALEE 113
                 67788888865..57888889999999999999999999999988875 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.65
   PF13600.1  68 aseelaeleaelraledelarleaek 93 
                 + ++ ae+++++  l++el++ e+ +
  MMETSP1325-20131115|2264_1 134 RRRSPAEIRKQMALLQAELRESENAE 159
                 34455677777777777777776654 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.2    0.0056       5.9      25      46 ..      92     113 ..      79     131 .. 0.50
   2 ?    6.8   0.2    0.0072       7.6      34      62 ..     138     165 ..     132     168 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0056
   PF04102.7  25 evvaeqqkeidrlqrqlrllae 46 
                 ++v + + ++++l++++r+l+e
  MMETSP1325-20131115|2264_1  92 DEVRALEARVRALEARVRALEE 113
                 3333333333333333333333 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0072
   PF04102.7  34 idrlqrqlrllaerlkeleessneaseae 62 
                  +++++q++ll+ +l+e e +++++++a 
  MMETSP1325-20131115|2264_1 138 PAEIRKQMALLQAELRESE-NAESEKSAG 165
                 57899*************9.555545544 PP

>> PF09006.6  Lung surfactant protein D coiled-coil trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0061       6.4       1      19 [.      94     112 ..      87     117 .. 0.68
   2 ?    3.3   0.1     0.058        61       4      23 ..     141     160 ..     139     162 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0061
                 HHHHHHHHHHH---HHHHH CS
   PF09006.6   1 vaaLrQqveaLegqlqrLq 19 
                 v aL  +v+aLe +++ L+
  MMETSP1325-20131115|2264_1  94 VRALEARVRALEARVRALE 112
                 4566667777777776666 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.058
                 HHHHHHHH---HHHHHHHHH CS
   PF09006.6   4 LrQqveaLegqlqrLqaafs 23 
                 +r q+  L+ +l+  ++a s
  MMETSP1325-20131115|2264_1 141 IRKQMALLQAELRESENAES 160
                 799**********9999866 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.1     8e-05     0.084      75     118 ..      80     123 ..      77     145 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 8e-05
   PF11559.3  75 ierlktqleqlerelallqekerqlekklktleqklknekeelq 118
                 +++   q+ +l+ e+ +l+++ r+le++++ le+ lk+e++  +
  MMETSP1325-20131115|2264_1  80 FKKQRIQVPDLRDEVRALEARVRALEARVRALEEWLKREADKQA 123
                 678889999******************************99765 PP

>> PF01391.13  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.9   0.00024      0.25      25      58 ..      10      43 ..       5      51 .. 0.41
   2 ?   -0.3   0.1      0.67     7e+02      30      37 ..     125     132 ..     118     137 .. 0.45

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00024
  PF01391.13 25 GekGekGpaGekGppGaaGkpGapGekGeaGapg 58
                G ++++G+aG + ++GaaG++ a+G  G+a+a+g
  MMETSP1325-20131115|2264_1 10 GDAAAAGAAGGAAATGAAGDAAAAGAVGDAAAAG 43
                3333333333333333333333333333333333 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.67
  PF01391.13  30 kGpaGekG 37 
                 +Gpa +kG
  MMETSP1325-20131115|2264_1 125 AGPAAKKG 132
                 22222222 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.6    0.0011       1.2      59     135 ..      80     161 ..      75     165 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0011
  PF03962.10  59 Fpseakk..klkteleklkkeleelkqrikelqaeiekekkkreet...eereelleelkeleeelkklkkeleklakldpe 135
                 F+++  +   l++e+++l++++  l++r+  l++ ++ e+ k+ ++   +++ +  ++ +e+++++  l++el++ ++ ++e
  MMETSP1325-20131115|2264_1  80 FKKQRIQvpDLRDEVRALEARVRALEARVRALEEWLKREADKQAQAgpaAKKGQRRRSPAEIRKQMALLQAELRESENAESE 161
                 55555555578999***********************999999999888777778888889999999999999988777665 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.8   0.00048       0.5      45      77 ..      85     117 ..      78     121 .. 0.88
   2 ?   -1.0   0.2       1.2   1.3e+03      53      69 ..     137     153 ..     135     159 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00048
   PF07544.8  45 eelpdisrsveeqeaeIeeleeqiarkrevLkk 77 
                  ++pd+   v   ea+++ le ++++++e Lk+
  MMETSP1325-20131115|2264_1  85 IQVPDLRDEVRALEARVRALEARVRALEEWLKR 117
                 578**************************9986 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 1.2
   PF07544.8  53 sveeqeaeIeeleeqia 69 
                 s++e  ++++ l+ +++
  MMETSP1325-20131115|2264_1 137 SPAEIRKQMALLQAELR 153
                 55555566655555554 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.4   0.00053      0.56      20      51 ..      81     112 ..      78     125 .. 0.52
   2 ?   -0.0   0.2      0.52   5.5e+02      21      35 ..     140     154 ..     130     163 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00053
  PF04977.10  20 yqlkqeiaalqaelaklkaeneeLeaevkdLk 51 
                 ++++ ++ +l +e+ +l+a+ ++Lea+v+ L+
  MMETSP1325-20131115|2264_1  81 KKQRIQVPDLRDEVRALEARVRALEARVRALE 112
                 44444555555555555555555555555552 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 0.52
  PF04977.10  21 qlkqeiaalqaelak 35 
                 ++++++a lqael +
  MMETSP1325-20131115|2264_1 140 EIRKQMALLQAELRE 154
                 567788888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       928  (0.067876); expected 273.4 (0.02)
Passed bias filter:                      502  (0.0367174); expected 273.4 (0.02)
Passed Vit filter:                       109  (0.0079725); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 868.68
//
Query:       MMETSP1325-20131115|2265_1  [L=407]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-08   34.6   0.0    3.3e-08   33.3   0.0    1.6  1  PF03567.9 Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF03567.9  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.0   2.4e-12   3.3e-08      13     248 ..     125     383 ..     116     386 .. 0.66

  Alignments for each domain:
  == domain 1    score: 33.3 bits;  conditional E-value: 2.4e-12
   PF03567.9  13 fcrvpKvasttfkrvlvrligk.kctcnrrsinetwlfsrrstgwscglfadltelssteipkrldk................yfkfifvRdPfeRllSayrnkcvgdkrrgatwcgrlivckgr...lpacyegd.dwsgvsfeeFleclsnlaperer...nnrhwap....acd.lctrmladydlvgcyetleedlnailrllallnlknvavfgltefprktq......tanttrrsnstrasevevdlseklrqrleelYelDfe 248
                   rvpK+as+t+  ++ +l    ++t+++  ++ +  +sr      + + + +t l   + p+r+++                +++f+  RdP++Rl+S y+++ +g +r g +      ++ g    l+ c ++  +++++s  +F +c+++   + ++     r ++     ++  +++++  ++  v ++e++   l  ++++l+ ++ + ++     ++pr+         +++t +++ t+  e ++   +  +  ++elY++ ++
  MMETSP1325-20131115|2265_1 125 GMRVPKSASSTVQDLIDILAPVnRFTTSNVIQHRSVGRSRK-VDLDEEESRLCTYL--IQLPRRTVHtahigfldfakkslprPVYFATMRDPISRLISHYNYVHFG-PR-GVYV--LAPTRSGNapsLNECVNNHiMGKNKSGGTF-DCMQTVGLQLRFfcgVSRNCREynasNLAmAKANIKRNFATVLVVEKMFLSLIVLEKKLPGIFSGITER---YKHPRNGNaelrsrINFRTVNEKDTLDIEARA-YLQRELALEYELYDFAVR 383
                 579****************9955888888877777776555.44466677777777..5666666644778888888888888**********************73.22.2333..333344447775555555545555555555.445555544444444233333334356666888888999999999999987777777777644433333...23333222445566788888888888888855.555567888999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.51
# Mc/sec: 1912.39
//
Query:       MMETSP1325-20131115|2267_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-26   89.9   0.0    1.2e-25   89.2   0.0    1.4  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase
  ------ inclusion threshold ------
       0.11   11.8   0.3       0.19   11.1   0.2    1.3  1  PF06945.8  Protein of unknown function (DUF1289)


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.0   1.7e-29   1.2e-25       2      94 .]      21     115 ..      20     115 .. 0.96

  Alignments for each domain:
  == domain 1    score: 89.2 bits;  conditional E-value: 1.7e-29
                 SB---CT-EEEEEEEEEE.---EEEETTT...TTCEEEEECCTTSS-HHHHHHHTTSBCTEEEEEEEEGGGT-S-TTCCTTTS.TT-EEEEEEEEE CS
  PF00254.23   2 pkkakegdtVtvhyegkledgtvfdssys...rakpfefkvGsgqvikgleeglegmkvGekrtltippelaYgekglaggkippnatlvfevell 94 
                 +++ak gdt+ vhy+g++  g++fdss++   r++ f f vG+gqvi+g++ g+ +mkvGe++ +++ +++aYge+g  +g ip++a+l f+vell
  MMETSP1325-20131115|2267_1  21 ARAAKVGDTAAVHYTGTFPSGEEFDSSRRkahRKNGFPFCVGAGQVIRGWDVGVATMKVGERADFKLRFDYAYGENGI-PGRIPAHADLWFDVELL 115
                 6779***********************88899**********************************************.889************97 PP

>> PF06945.8  Protein of unknown function (DUF1289)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   2.7e-05      0.19      27      50 ..     181     204 ..     177     205 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.7e-05
   PF06945.8  27 iaaWssmsdeerravlaelparka 50 
                 i++W +m+++er+  l+ +++r++
  MMETSP1325-20131115|2267_1 181 ISNWPTMNEQERQTALRLIAKRNK 204
                 89******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.65
# Mc/sec: 855.32
//
Query:       MMETSP1325-20131115|2268_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.5   0.1      0.017   14.8   0.1    1.4  1  PF06103.6  Bacterial protein of unknown function (DUF948)
      0.017   15.3   0.2      0.039   14.1   0.2    1.7  1  PF13675.1  Type IV pili methyl-accepting chemotaxis transducer N-term
      0.077   12.4   1.0       0.35   10.3   0.1    2.3  2  PF12436.3  Ubiquitin-specific protease 7
        1.6    8.4   6.0        2.5    7.8   0.0    2.3  2  PF07716.10 Basic region leucine zipper


Domain annotation for each model (and alignments):
>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   5.1e-06     0.017      27      78 ..      61     112 ..      49     119 .] 0.84

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 5.1e-06
   PF06103.6  27 tldevnktvkkltkqvdgitketeellaktnelleDvneKvetldpvfqava 78 
                  l+ +++ +++   +v+ i+ke +e la+  el + v +++ +++++++a +
  MMETSP1325-20131115|2268_1  61 RLKVIRAQMSGDGGDVEAIKKERDEALAENAELKKVVAKQTYRINHLIKALN 112
                 46667777888889**********************************9976 PP

>> PF13675.1  Type IV pili methyl-accepting chemotaxis transducer N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.2   1.1e-05     0.039      38      99 ..       9      71 ..       2     119 .] 0.77

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.1e-05
   PF13675.1 38 gsddeearalleqsieefeatlaaLqrgddsrg.aseevkaql....aqvealweelrplleaaast 99
                +++  +++a+ e++i++++++l++L+ g+ + g ++ +v++ l    ++v a+ + +r+++    s 
  MMETSP1325-20131115|2268_1  9 ENAMGDRAAAAEARIAQLAKRLDSLETGGGAAGgSNAAVEDALcayqKEVLARLKVIRAQM----SG 71
                5566678899*********************999888888888444455555556666555....33 PP

>> PF12436.3  Ubiquitin-specific protease 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.23   7.8e+02      19      26 ..       2       9 ..       1      11 [. 0.84
   2 ?   10.3   0.1    0.0001      0.35      19      30 ..      75      86 ..      74      87 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.23
   PF12436.3 19 erErrrKE 26
                + E+++KE
  MMETSP1325-20131115|2268_1  2 DVEAIKKE 9 
                5799***9 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.0001
   PF12436.3 19 erErrrKEReEa 30
                + E+++KER+Ea
  MMETSP1325-20131115|2268_1 75 DVEAIKKERDEA 86
                579********9 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00075       2.5      26      53 ..       8      35 ..       7      36 .. 0.92
   2 ?    1.6   1.9     0.064   2.2e+02      15      46 ..      78     109 ..      77     117 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00075
  PF07716.10 26 keeeleervkeLeeeNaqLrqkveqLek 53
                ke+ + +r+ + e+++aqL +++++Le+
  MMETSP1325-20131115|2268_1  8 KENAMGDRAAAAEARIAQLAKRLDSLET 35
                8899999******************996 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.064
  PF07716.10  15 AArrsRekkkakeeeleervkeLeeeNaqLrq 46 
                 A ++ R+ + a+++el++ v + + +++ L +
  MMETSP1325-20131115|2268_1  78 AIKKERDEALAENAELKKVVAKQTYRINHLIK 109
                 55777888888888888888888888887755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       755  (0.0552224); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 570.33
//
Query:       MMETSP1325-20131115|2271_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0033   17.1  19.6     0.0033   17.1  13.6    2.2  2  PF12718.2  Tropomyosin like
  ------ inclusion threshold ------
      0.012   15.5   3.1      0.012   15.5   2.2    3.3  3  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
       0.12   12.5  15.4       0.43   10.7   1.9    3.8  2  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.17   11.2   7.9      0.037   13.3   2.4    2.0  2  PF14066.1  Protein of unknown function (DUF4256)
       0.22   10.6   5.3      0.044   12.9   0.6    1.8  2  PF10343.4  Protein of unknown function (DUF2419)
       0.25   10.6  14.2       0.38   10.0   9.8    1.4  1  PF14335.1  Domain of unknown function (DUF4391)
       0.35    8.2  19.3        1.6    6.0  13.2    1.7  1  PF05478.6  Prominin
       0.42    9.6   7.0       0.88    8.5   1.1    1.8  2  PF04582.7  Reovirus sigma C capsid protein
       0.67    8.9  32.5      0.043   12.8  16.1    2.2  2  PF13851.1  Growth-arrest specific micro-tubule binding
       0.76    9.6  28.6        1.7    8.5   5.6    2.3  2  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
        1.5    8.9  30.8      0.044   13.8   7.8    3.5  3  PF13747.1  Domain of unknown function (DUF4164)
        2.1    8.1  36.7        1.4    8.7  12.3    2.9  3  PF11559.3  Afadin- and alpha -actinin-Binding
        2.1    6.7  32.4        0.2   10.1  14.7    2.1  2  PF08317.6  Spc7 kinetochore protein
        3.7    7.2  20.5        2.8    7.6   6.1    3.0  3  PF07889.7  Protein of unknown function (DUF1664)
        4.5    6.0  15.1      0.032   13.0   1.6    2.5  3  PF07817.8  GLE1-like protein
        4.6    4.3  31.1        5.8    3.9  21.5    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
        4.6    6.6  40.5        2.3    7.6  13.2    2.0  2  PF00769.14 Ezrin/radixin/moesin family
        6.6    6.5  11.4       0.69    9.6   2.6    2.8  2  PF06103.6  Bacterial protein of unknown function (DUF948)
          8    5.8  38.6        2.5    7.5  16.8    2.8  2  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   6.0       4.3   3.1e+03      50      94 ..      43      88 ..      35     111 .. 0.53
   2 !   17.1  13.6   4.6e-06    0.0033      45     140 ..     113     215 ..      93     218 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 4.3
   PF12718.2 50 evekleeqlkeakekleekekkkteae.altrriqlLEeeleesek 94
                 v++l ++ +e +e ++e+  k++ +e + ++  ++LE+++++s +
  MMETSP1325-20131115|2271_1 43 KVNQLTAKCEELREIEQEQRIKASVMEaQAQKDRSTLEDQMQKSAE 88
                3444444455555555555555555553333334445555544443 PP

  == domain 2    score: 17.1 bits;  conditional E-value: 4.6e-06
   PF12718.2  45 qqlEeevekleeqlkeakekleekekkkteaealtrriqlLEeeleesekrL.......ketteklreadkkaeeseRkvkaLEeerdeweekleelekklke 140
                 + l ++v +l+++l+ a    e +++++++  ++    + L+ee+e  e++L       +e t+kl+ ++ +aee++ +v+ LE++  +  e+++  ek l+ 
  MMETSP1325-20131115|2271_1 113 DRLTQQVANLQAKLSAASRLNESHKSDHSKLAKVDNVRKALQEEVEIKERQLkeltqmqREVTTKLEAMTTRAEELDSRVQHLEQTGRDLQERYDRSEKDLRH 215
                 4566777788888888877777777777777766666666666666666666555555588999*********************************999876 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.4      0.38   2.7e+02      41      60 ..      41      60 ..      27      74 .. 0.64
   2 ?    4.4   1.3      0.05        36      36      72 ..     111     147 ..      68     149 .. 0.71
   3 ?   15.5   2.2   1.7e-05     0.012       5      65 ..     146     206 ..     144     219 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.38
   PF10046.4 41 eqkakslekeleklkqkyee 60
                +qk+++l  + e+l + ++e
  MMETSP1325-20131115|2271_1 41 SQKVNQLTAKCEELREIEQE 60
                45555555555555555544 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.05
   PF10046.4  36 kykeleqkakslekeleklkqkyeelkpylqqideie 72 
                  ++ l+q +++l+ +l+++++++e+ k+  +++ +++
  MMETSP1325-20131115|2271_1 111 AIDRLTQQVANLQAKLSAASRLNESHKSDHSKLAKVD 147
                 4556777888888888888888888888887777766 PP

  == domain 3    score: 15.5 bits;  conditional E-value: 1.7e-05
   PF10046.4   5 fkkiskyveaeleisaedlklLeklNeataekykeleqkakslekeleklkqkyeelkpyl 65 
                 ++++ k +++e+ei   +lk L ++ + ++ k + +++ a++l++ ++ l+q   +l++  
  MMETSP1325-20131115|2271_1 146 VDNVRKALQEEVEIKERQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLEQTGRDLQERY 206
                 67899999*******************************************9999988765 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   4.6      0.44   3.2e+02      20      55 ..     112     147 ..      35     150 .. 0.83
   2 ?   10.7   1.9   0.00059      0.43      15      62 ..     145     196 ..     140     204 .. 0.75

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.44
   PF05531.7  20 VdalqqqvddvqenlpdvtelnekLdaqsaqLaele 55 
                 +d l qqv+++q++l   + lne   +   +La+++
  MMETSP1325-20131115|2271_1 112 IDRLTQQVANLQAKLSAASRLNESHKSDHSKLAKVD 147
                 677777777777777777777776666666666655 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00059
   PF05531.7  15 avddkVdalqqqv....ddvqenlpdvtelnekLdaqsaqLaeletkvenIq 62 
                 +vd+  +alq++v     +++e  +   e+++kL+a+++  +el++ v++ +
  MMETSP1325-20131115|2271_1 145 KVDNVRKALQEEVeikeRQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLE 196
                 56666678899995444455554444557899***************99876 PP

>> PF14066.1  Protein of unknown function (DUF4256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   2.4   5.2e-05     0.037      25     105 ..      41     121 ..      27     152 .. 0.78
   2 ?   -0.3   0.2      0.78   5.6e+02      23      43 ..     152     172 ..     125     192 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 5.2e-05
   PF14066.1  25 qekleaepeklkslkemeetg.GepdvvaldkktdelifvdcsaesPkgrrslcydkealesrkenkPessavdlaaemgie 105
                 ++k+++ + k + l+e+e+ +  +  v++ ++++d+ ++ d  ++s ++rr lc   ea++ r + k ++ a+d  ++   +
  MMETSP1325-20131115|2271_1  41 SQKVNQLTAKCEELREIEQEQrIKASVMEAQAQKDRSTLEDQMQKSAEDRRILCAQIEAQKVRLA-KFDERAIDRLTQQVAN 121
                 46888889999999999986515889**********************************99987.5666677666555444 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.78
   PF14066.1  23 kvqekleaepeklkslkemee 43 
                 ++qe++e ++ +lk l++m++
  MMETSP1325-20131115|2271_1 152 ALQEEVEIKERQLKELTQMQR 172
                 233444444555555555543 PP

>> PF10343.4  Protein of unknown function (DUF2419)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.54   3.9e+02      80     134 ..      65     119 ..      37     138 .. 0.72
   2 ?   12.9   0.6   6.1e-05     0.044      52     122 ..     146     216 ..     124     226 .. 0.74

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.54
   PF10343.4  80 kkvfrsateeeiPlleeRlellreagrvllekfdgsfvnliksanksAaalvnll 134
                 ++v++ +++++  +le+ ++   e  r+l+ + +++ v l k  ++   +l + +
  MMETSP1325-20131115|2271_1  65 ASVMEAQAQKDRSTLEDQMQKSAEDRRILCAQIEAQKVRLAKFDERAIDRLTQQV 119
                 3577888888888888888888888888888888888887776666666665555 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 6.1e-05
   PF10343.4  52 vaalkraleegieitdpefl..eevteeelkkvfrsateeeiPlleeRlellreagrvllekfdgsfvnliks 122
                 v  +++al+e++ei + +    +++++e  +k+ +    ++   l++R++ l+++gr l e++d s  +l +s
  MMETSP1325-20131115|2271_1 146 VDNVRKALQEEVEIKERQLKelTQMQREVTTKL-EAM-TTRAEELDSRVQHLEQTGRDLQERYDRSEKDLRHS 216
                 56799********99877654344544444444.433.477789********************998776554 PP

>> PF14335.1  Domain of unknown function (DUF4391)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   9.8   0.00052      0.38      97     220 ..      57     186 ..      33     187 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00052
   PF14335.1  97 leyedklqlsvahkrlnqadaskvvleeyfatew.........afleelslklqsglnldalYeslvnqilkleassetgafekaslkerverlkqieelekeiaklkkklkkekqfnrkvelnaeikklkke 220
                 +e+e++++ sv++    qa++++ +le+ ++               ++++l+++++  +d+l +++ n  +kl+a+s  ++  k++ ++  + ++ ++ l++e++  +++lk+ +q++r v+ + e+ ++++e
  MMETSP1325-20131115|2271_1  57 IEQEQRIKASVMEA---QAQKDRSTLEDQMQKSAedrrilcaqIEAQKVRLAKFDERAIDRLTQQVANLQAKLSAASRLNESHKSDHSKLAKVDNVRKALQEEVEIKERQLKELTQMQREVTTKLEAMTTRAE 186
                 67889999999998...89*******888888888*******99999******************************8888888788888888888899**************************99988775 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  13.2    0.0022       1.6     240     409 ..      35     208 ..      30     212 .. 0.68

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0022
   PF05478.6 240 eevvelgqvlkemkeaLesvsktvkelkeegsqlesglssvrrrlnellaklCktq...eCakilsslsilald.adfsqlpdvteilenleevvea..dlskvvqeglstleeipskvkeqtssvvqevkkaldslgteiksvaeelpkq..vkstlsqllenvqksikpasdeveq 409
                 e +++ +q++++  ++ e++ ++++e + ++s +e++ ++ r +l++ ++k + ++    Ca+i+ +  +++l   d ++++ +t+++ nl++ ++a   l++  +   s+l ++  +v++ ++++v+   ++l++l++  ++v+++l     + ++l+  ++ ++++ +  ++ +++
  MMETSP1325-20131115|2271_1  35 EIIHRESQKVNQLTAKCEELREIEQEQRIKASVMEAQAQKDRSTLEDQMQK-SAEDrriLCAQIEAQ--KVRLAkFDERAIDRLTQQVANLQAKLSAasRLNESHKSDHSKLAKVD-NVRKALQEEVEIKERQLKELTQMQREVTTKLEAMttRAEELDSRVQHLEQTGRDLQERYDR 208
                 55777799*******************************************.7777899*****554..44444499999999999999998755431246666666666666663.5666666666655555555555555555544332123344444444444444444444444 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.5     0.045        33      81     139 ..      71     130 ..      34     139 .. 0.60
   2 ?    8.5   1.1    0.0012      0.88      24     100 ..     137     213 ..     130     225 .. 0.69

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.045
   PF04582.7  81 elstevaalqssvdslsseladlselvsahdaalsslq.tevdanstdisnlksdvsang 139
                 + +++ ++l++ +++++ +   l   ++a++  l+++  + +d ++ +++nl++++sa +
  MMETSP1325-20131115|2271_1  71 QAQKDRSTLEDQMQKSAEDRRILCAQIEAQKVRLAKFDeRAIDRLTQQVANLQAKLSAAS 130
                 234555667777777777777788888888888888752568888889999988888765 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0012
   PF04582.7  24 tinpGdltavyerltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslssel 100
                 + ++  l++v +   al+  ++  ++ ++++++   ++ ++l+ +t+  +++ + +++l+++ + lq+  d +  +l
  MMETSP1325-20131115|2271_1 137 KSDHSKLAKVDNVRKALQEEVEIKERQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLEQTGRDLQERYDRSEKDL 213
                 55566677777777777777777777777777777777777777777777777777777777777777776665555 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   7.1      0.15   1.1e+02      21     107 ..      36     124 ..      32     129 .. 0.78
   2 ?   12.8  16.1     6e-05     0.043      38     174 ..      82     221 ..      74     225 .. 0.93

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.15
   PF13851.1  21 itknnLelIkslkeeiaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkkl.kqyekdkqsLknlkak.lkelekelknlkw 107
                 i++   + +++l  + +el++ e++++ +++ ++++ ++ +  L+ + ++ +e ++ l +q e +k+ L+++ ++ +++l++++ nl+ 
  MMETSP1325-20131115|2271_1  36 IIHRESQKVNQLTAKCEELREIEQEQRIKASVMEAQAQKDRSTLEDQMQKSAEDRRILcAQIEAQKVRLAKFDERaIDRLTQQVANLQA 124
                 66777778899999999999999999999999988888888888877777777777663577889999999988724678888888875 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 6e-05
   PF13851.1  38 elkkkeekneklmaeikkenkrlke....pLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErdelykkfeaaiqdvqqktelknllLekKlealneelekkeaqLeevlaaan 174
                 +++k +e+++ l a+i++++ rl +     + +++++v++L+ kl+ +++ ++s k+ ++kl + ++  k+l+ e e++e++++++ +  +e ++k ea++    ++ + +   Le+  + l+e++++ e+ L+  l++a+
  MMETSP1325-20131115|2271_1  82 QMQKSAEDRRILCAQIEAQKVRLAKfderAIDRLTQQVANLQAKLSAASRLNESHKSDHSKLAKVDNVRKALQEEVEIKERQLKELTQMQREVTTKLEAMTTR-AEELDSRVQHLEQTGRDLQERYDRSEKDLRHSLEKAS 221
                 899********************7644447999*****************************************************************99876.5789****************************99875 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.6    0.0024       1.7       4      79 ..      55     130 ..      52     137 .. 0.88
   2 ?    6.4   9.2      0.01       7.5       5      76 ..     136     207 ..     132     226 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0024
   PF10473.4   4 kqlqvlekLkesereadlLkdkvenLErELelseenqelvileaenskaevetLkt.kieemaeelkdLeldLvsvr 79 
                 ++ ++++++k s  ea++ kd+  +LE  ++ s e++  + ++ e +k     + +  i+++++++ +L+  L   +
  MMETSP1325-20131115|2271_1  55 REIEQEQRIKASVMEAQAQKDR-STLEDQMQKSAEDRRILCAQIEAQKVRLAKFDErAIDRLTQQVANLQAKLSAAS 130
                 567889999*********9999.79*************************999965169***********9998766 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.01
   PF10473.4   5 qlqvlekLkesereadlLkdkvenLErELelseenqelvileaenskaevetLktkieemaeelkdLeldLv 76 
                 +++  +kL ++ +  ++L+++ve  Er L+ + + q +v  ++e     +e L ++++++++  +dL+    
  MMETSP1325-20131115|2271_1 136 HKSDHSKLAKVDNVRKALQEEVEIKERQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLEQTGRDLQERYD 207
                 66678999999***************************************************9999986544 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   2.7     0.067        48      26      66 ..      68     108 ..      61     111 .. 0.87
   2 ?   13.8   7.8   6.1e-05     0.044       7      80 ..     109     182 ..     105     188 .. 0.94
   3 ?    1.9   0.1       0.3   2.1e+02      60      87 ..     190     217 ..     183     219 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.067
   PF13747.1  26 rrleaerkrdeleaeiqaldadrsrLaqeLdkaearaerle 66 
                 +  +a+++r+ le ++q+  +dr  L +++ ++++r+++ +
  MMETSP1325-20131115|2271_1  68 MEAQAQKDRSTLEDQMQKSAEDRRILCAQIEAQKVRLAKFD 108
                 567889999***************************99876 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 6.1e-05
   PF13747.1   7 eaalkrLeaaldsLesaverrleaerkrdeleaeiqaldadrsrLaqeLdkaearaerleeanrEvsrrLkaai 80 
                 e+a +rL + + +L +++    + ++++++  ++++++d+ r+ L +e   +e ++++l +++rEv+++L+a  
  MMETSP1325-20131115|2271_1 109 ERAIDRLTQQVANLQAKLSAASRLNESHKSDHSKLAKVDNVRKALQEEVEIKERQLKELTQMQREVTTKLEAMT 182
                 78999*****************************************************************9765 PP

  == domain 3    score: 1.9 bits;  conditional E-value: 0.3
   PF13747.1  60 araerleeanrEvsrrLkaaietiravL 87 
                  r + le++ r++++r +++ +++r+ L
  MMETSP1325-20131115|2271_1 190 SRVQHLEQTGRDLQERYDRSEKDLRHSL 217
                 4788888888888888888887777655 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   1.6       1.5   1.1e+03      75     104 ..      37      66 ..      32      76 .. 0.51
   2 ?    8.7  12.3    0.0019       1.4      49     145 ..      71     167 ..      67     173 .. 0.90
   3 ?    8.0   5.7    0.0031       2.2      59     122 ..     162     225 ..     161     227 .] 0.88

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 1.5
   PF11559.3  75 ierlktqleqlerelallqekerqlekklk 104
                 i r ++++ ql+ +++ l e e++++ k +
  MMETSP1325-20131115|2271_1  37 IHRESQKVNQLTAKCEELREIEQEQRIKAS 66 
                 455555555555555555555444444433 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0019
   PF11559.3  49 rdleqresleetlrkleaeierlqskierlktqleql.erelallqekerqlekklktleqklknekeelqrlkniiqsiktqyahelkkkdreiekL 145
                 + ++ r +le++++k+  +   l  +ie  k +l+++ er ++ l+++ ++l++kl+ +++ + + k + ++l  ++++++++ + e+  k+r++++L
  MMETSP1325-20131115|2271_1  71 QAQKDRSTLEDQMQKSAEDRRILCAQIEAQKVRLAKFdERAIDRLTQQVANLQAKLSAASRLNESHKSDHSKLA-KVDNVRKALQEEVEIKERQLKEL 167
                 56778999***********************999997356677*****************************96.79999999999999999999887 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.0031
   PF11559.3  59 etlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkn 122
                 ++l++l+      ++k+e ++t+ e+l +++++l+++ r+l+ ++ + e+ l+   e ++r++ 
  MMETSP1325-20131115|2271_1 162 RQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLEQTGRDLQERYDRSEKDLRHSLEKASRMQH 225
                 566777777777899999************************************9999999985 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   9.7      0.42     3e+02     178     269 ..      36     135 ..      33     138 .. 0.64
   2 ?   10.1  14.7   0.00028       0.2     154     291 ..      79     226 ..      77     227 .] 0.80

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.42
   PF08317.6 178 ilpklrekkealkeelasLrqlkde...leecdseeleklreeLssleekieekrk....kleeleeelqel.kkkiealkekkselleeiaeaekilee 269
                 i+++ ++k ++l  + ++Lr++++e    +++ + + +k r+ L++ ++k +e r+    ++e  + +l +  + +i+ l++++++l++++++a +  e 
  MMETSP1325-20131115|2271_1  36 IIHRESQKVNQLTAKCEELREIEQEqriKASVMEAQAQKDRSTLEDQMQKSAEDRRilcaQIEAQKVRLAKFdERAIDRLTQQVANLQAKLSAASRLNES 135
                 7788888999999999999999999666555566666666666766666665555421113333333333332457888888888888888888777665 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00028
   PF08317.6 154 Leenleelkedeellnkklelinsilpklrekk.ealkeelasLrqlkde......leecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaeki...leecrgfsakeisklkekvsllekl 291
                 Le+++++  ed + l +++e+ +  l k  e+  ++l +++a+L++  +         + d+++l+k+ +  ++l+e++e k+++l+el++  +e+++k+ea ++  +el ++++ +e+    l+e+ + s+k++++  ek s +++l
  MMETSP1325-20131115|2271_1  79 LEDQMQKSAEDRRILCAQIEAQKVRLAKFDERAiDRLTQQVANLQAKLSAasrlneSHKSDHSKLAKVDNVRKALQEEVEIKERQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLEQTgrdLQERYDRSEKDLRHSLEKASRMQHL 226
                 777778888888888888888887777777764378888888888765555666557788999999999999999***************************************9999762115566667889999999999999986 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   2.3     0.064        46      67     107 ..      41      85 ..      33      98 .. 0.77
   2 ?    2.9   0.2      0.11        78      64      90 ..     113     139 ..      90     145 .. 0.74
   3 ?    7.6   6.1    0.0039       2.8      44     124 ..     118     197 ..     109     213 .. 0.61

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.064
   PF07889.7  67 sqridnlddkldeqkeiske..ikeevteir..edlsaikedvks 107
                 sq++++l  k +e +ei +e  ik  v+e++  +d s++++++++
  MMETSP1325-20131115|2271_1  41 SQKVNQLTAKCEELREIEQEqrIKASVMEAQaqKDRSTLEDQMQK 85 
                 89*************997643389999886511566777777765 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.11
   PF07889.7  64 khLsqridnlddkldeqkeiskeikee 90 
                  +L+q++ nl+ kl + + + ++ k++
  MMETSP1325-20131115|2271_1 113 DRLTQQVANLQAKLSAASRLNESHKSD 139
                 568888888888888888888777766 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0039
   PF07889.7  44 AvasvtkqlekvseavasakkhLsq..ridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLesklesles 124
                  va++  +l   s   +s k + s+  ++dn+ + l+e+ ei+++  +e+t+++++++   + ++++++  e L+s++++le+
  MMETSP1325-20131115|2271_1 118 QVANLQAKLSAASRLNESHKSDHSKlaKVDNVRKALQEEVEIKERQLKELTQMQREVT---TKLEAMTTRAEELDSRVQHLEQ 197
                 4444444444444333333333332226777777777777777777777777776554...5677777777777777777776 PP

>> PF07817.8  GLE1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   1.1      0.35   2.5e+02       5      52 ..      37      84 ..      33      91 .. 0.63
   2 ?    0.4   1.0      0.32   2.3e+02       3      57 ..      70     129 ..      68     145 .. 0.47
   3 ?   13.0   1.6   4.4e-05     0.032       4      61 ..     145     200 ..     142     219 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.35
                HHHHHHHTHHHHHS-HHHHHHHHHHHHHHGGG-----SBHHHHHHHHH CS
   PF07817.8  5 ieqiksalkellkkdkelkklraelkrkinpkvgqlsnsesqlkkite 52
                i+   +++++l+ k +el+++++e++ k+++   q ++ +s l++ ++
  MMETSP1325-20131115|2271_1 37 IHRESQKVNQLTAKCEELREIEQEQRIKASVMEAQAQKDRSTLEDQMQ 84
                555666666666666777777766666666666666666666655555 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.32
                 HHHHHHHHHTHHHHHS-HHHHH.HHHHHHHHHGGG-.....----SBHHHHHHHHHHHHHH CS
   PF07817.8   3 ekieqiksalkellkkdkelkk.lraelkrkinpkv.....gqlsnsesqlkkiteklsql 57 
                 +++++  s+l+++++k +e ++ l+a++  + ++++      ++ + ++q+++++ kls+ 
  MMETSP1325-20131115|2271_1  70 AQAQKDRSTLEDQMQKSAEDRRiLCAQIEAQ-KVRLakfdeRAIDRLTQQVANLQAKLSAA 129
                 5677778888888885554444034433322.33330001033445555555555555444 PP

  == domain 3    score: 13.0 bits;  conditional E-value: 4.4e-05
                 HHHHHHHHTHHHHH.S-HHHHHHHHHHHHHHGGG-----SBHHHHHHHHHHHHHH.... CS
   PF07817.8   4 kieqiksalkellk.kdkelkklraelkrkinpkvgqlsnsesqlkkiteklsqllsgq 61 
                 k+ +  +al+e+++ k+ +lk+l+ +++r++++k++++++  ++l + +++l q+  g+
  MMETSP1325-20131115|2271_1 145 KVDNVRKALQEEVEiKERQLKELT-QMQREVTTKLEAMTTRAEELDSRVQHLEQT--GR 200
                 778899********9999999985.799**************************9..44 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9  21.5     0.008       5.8     274     454 ..      42     220 ..      28     226 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.008
   PF12128.3 274 adeerleeeqeevkeakkelkeqlrtledelkeasdelnqelsaanakleakeselealeeqkkkfedkdieklkadldqlpsirseleeveaeldaltekvqdvqe..kferrkqkikeqleeeleknkerleaireekerqkaaieealealesqlrkqleaqkeelneeekelesrleel 454
                 ++ ++l+ + ee  e ++e + +++ +e++ ++ +++l+ ++++  ++     +++ea + +  kf++  i++l ++  +l +  s  + ++++++   +k  +v++  k  +++  ike++ +el +++ ++    e+  ++ ++ ++  + le++ r    + +e+  + ek+l+++le++
  MMETSP1325-20131115|2271_1  42 QKVNQLTAKCEELREIEQEQRIKASVMEAQAQKDRSTLEDQMQKSAEDRRILCAQIEAQKVRLAKFDERAIDRLTQQVANLQAKLSAASRLNESHKSDHSKLAKVDNvrKALQEEVEIKERQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLEQTGR----DLQERYDRSEKDLRHSLEKA 220
                 455678888889999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999852266667778999999999999999888889999999999999999999888....45555556666666666554 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  13.2    0.0032       2.3      30     126 ..      39     140 ..      33     151 .. 0.74
   2 ?    4.3  10.1     0.034        24      15      82 ..     151     219 ..     141     226 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0032
  PF00769.14  30 eseekaeel....eeklkqeeeeaqklekkakeleeekerLeeeaaksekekeeLekevdeaeaevaklee.erekkeaeteqlqkelreareaeeeakeel 126
                 ++++k+++l    ee +  e+e++ k  + ++++++  ++Le +++ks+++++ L +++++ +++ ak  e + ++ ++  + lq++l +a + +e  k+  
  MMETSP1325-20131115|2271_1  39 RESQKVNQLtakcEELREIEQEQRIKASVMEAQAQKDRSTLEDQMQKSAEDRRILCAQIEAQKVRLAKFDErAIDRLTQQVANLQAKLSAASRLNESHKSDH 140
                 4555555551111555666666666777777777788889****************************9762668888999*******99988665555543 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.034
  PF00769.14  15 eqleeemrkaqkeleeseekaeeleeklkqeeeeaqklekkakeleeekerLeeeaakseke.keeLek 82 
                 + l+ee++ ++++l+e +++ +e   kl  +   a++l+ + ++le++ + L+e+  +sek+ ++ Lek
  MMETSP1325-20131115|2271_1 151 KALQEEVEIKERQLKELTQMQREVTTKLEAMTTRAEELDSRVQHLEQTGRDLQERYDRSEKDlRHSLEK 219
                 5689***************************************************99999964555655 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.6      0.63   4.5e+02      70      70 ..     104     104 ..      34     135 .. 0.62
   2 ?    9.6   2.6   0.00097      0.69      26      86 ..     141     204 ..     129     207 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.63
   PF06103.6  70 l 70 
                 l
  MMETSP1325-20131115|2271_1 104 L 104
                 1 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00097
   PF06103.6  26 ktldevnktvkkltkqvdgitketeellaktnell...eDvneKvetldpvfqavadlgesvsd 86 
                 + l++v+++ k l+++v+   ++++el++ ++e++   e + ++ e+ld+ +q+ +++g+ +++
  MMETSP1325-20131115|2271_1 141 SKLAKVDNVRKALQEEVEIKERQLKELTQMQREVTtklEAMTTRAEELDSRVQHLEQTGRDLQE 204
                 45889999999*****************99999972225577899**************98875 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   7.5       2.1   1.5e+03     129     174 ..      41      90 ..      34     101 .. 0.43
   2 ?    7.5  16.8    0.0034       2.5      79     185 ..      93     203 ..      83     227 .] 0.59

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 2.1
   PF04156.9 129 eerlesleesikelakeirelreeisdlkeevqelrselerl....qedl 174
                 ++++  l+ +++el++  +e+r + s  ++++q+ rs+le+     +ed+
  MMETSP1325-20131115|2271_1  41 SQKVNQLTAKCEELREIEQEQRIKASVMEAQAQKDRSTLEDQmqksAEDR 90 
                 44455555555555555555553333333333333333333322223333 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0034
   PF04156.9  79 lqeelsesesqlsele.eeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr.......eeisdlkeevqelrselerlqedlqrlqeklaelq 185
                 l++ + +++ +l++++ + +++l +++a l+++l++ ++ +e+++    s  ++l +++   k+l++e++  +       ++ ++   +++ +++++e+l+ + q+l++   +lq
  MMETSP1325-20131115|2271_1  93 LCAQIEAQKVRLAKFDeRAIDRLTQQVANLQAKLSAASRLNESHK----SDHSKLAKVDNVRKALQEEVEIKErqlkeltQMQREVTTKLEAMTTRAEELDSRVQHLEQTGRDLQ 203
                 566777888888888878888888888888888888888888888....444444444444444444444444222222244444444444444444444444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2208  (0.161498); expected 273.4 (0.02)
Passed bias filter:                      572  (0.0418373); expected 273.4 (0.02)
Passed Vit filter:                       114  (0.00833821); expected 13.7 (0.001)
Passed Fwd filter:                        63  (0.00460796); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 1.59u 0.35s 00:00:01.94 Elapsed: 00:00:00.80
# Mc/sec: 679.97
//
Query:       MMETSP1325-20131115|2272_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   11.3   4.5       0.73    9.4   0.3    2.1  2  PF03386.9 Early nodulin 93 ENOD93 protein


Domain annotation for each model (and alignments):
>> PF03386.9  Early nodulin 93 ENOD93 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.3    0.0029        40      24      42 ..      30      48 ..      26      51 .. 0.75
   2 ?    9.4   0.3   5.3e-05      0.73      25      55 ..      55      85 ..      47      93 .] 0.82

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0029
   PF03386.9 24 aavasavPtlasvRmlpWA 42
                + +a+a+Pt++ + +   A
  MMETSP1325-20131115|2272_1 30 TELAAAIPTVVVINVDGLA 48
                45799*****988776555 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 5.3e-05
   PF03386.9 25 avasavPtlasvRmlpWAkanlnytaqalii 55
                a a av tl   R + W +++l  t+++  +
  MMETSP1325-20131115|2272_1 55 AAAIAVATLFRKRRSAWCRTDLSVTSRSFCL 85
                4577899******************998654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|2254_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.60
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|2269_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-10   39.6   0.0    4.7e-10   39.3   0.0    1.1  1  PF13905.1 Thioredoxin-like


Domain annotation for each model (and alignments):
>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0   3.4e-14   4.7e-10      39      95 ..       2      58 ..       1      59 [. 0.94

  Alignments for each domain:
  == domain 1    score: 39.3 bits;  conditional E-value: 3.4e-14
   PF13905.1 39 ivyVsldrdeeefkkylkknkkpwlavpfndkrrnklkklykvkaiPtlvvld.kdge 95
                i++ s+d+de ++k+y++ +   + a++f+d++ n+lk++y+ ++iP lvv++ k ge
  MMETSP1325-20131115|2269_1  2 IIFGSSDQDEAAMKEYFSSM-EGFHAFAFGDEKINALKSMYGASGIPWLVVVNaKTGE 58
                77889***************.99******************************77765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|2275_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   27.7   0.1    1.8e-06   27.2   0.1    1.3  1  PF07653.12 Variant SH3 domain
    0.00021   20.5   0.9    0.00033   19.8   0.6    1.3  1  PF00018.23 SH3 domain


Domain annotation for each model (and alignments):
>> PF07653.12  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.1   2.6e-10   1.8e-06      32      52 ..      10      30 ..       2      32 .. 0.88

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 2.6e-10
                ----BEEEE-TT---B--HHH CS
  PF07653.12 32 sdgwwegesgGrvGlfPsslV 52
                sdgwweg+ +G+vG+fPs+++
  MMETSP1325-20131115|2275_1 10 SDGWWEGALNGQVGWFPSNFC 30
                68****************986 PP

>> PF00018.23  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.6   4.8e-08   0.00033      30      48 .]      11      27 ..       5      27 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 4.8e-08
                SSEEEEEETTTTB---EEG CS
  PF00018.23 30 dgWwkgrlkgtgkeGliPs 48
                dgWw+g l+  g+ G++Ps
  MMETSP1325-20131115|2275_1 11 DGWWEGALN--GQVGWFPS 27
                49*******..7******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 357.35
//
Query:       MMETSP1325-20131115|2277_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       561  (0.0410328); expected 273.4 (0.02)
Passed bias filter:                      467  (0.0341574); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|2278_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 265.13
//
Query:       MMETSP1325-20131115|2273_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-19   69.3   3.8    3.4e-19   69.3   2.7    3.2  2  PF01145.20 SPFH domain / Band 7 family
     0.0023   17.3   0.2     0.0023   17.3   0.1    2.2  4  PF13421.1  SPFH domain-Band 7 family
  ------ inclusion threshold ------
       0.25   11.1   6.1      0.095   12.5   0.3    2.7  2  PF10501.4  Ribosomal subunit 39S
        7.5    6.5  15.4        1.6    8.6   6.0    2.9  3  PF12320.3  Type 5 capsule protein repressor C-terminal domain
          8    6.0  14.2        1.8    8.1   6.1    2.2  2  PF13550.1  Putative phage tail protein


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   2.7   1.2e-22   3.4e-19       1     176 [.      48     287 ..      48     294 .. 0.84
   2 ?   -7.4  10.5         5   1.4e+04     118     178 ..     329     389 ..     290     412 .. 0.63

  Alignments for each domain:
  == domain 1    score: 69.3 bits;  conditional E-value: 1.2e-22
  PF01145.20   1 ktvepgevgvvvrfGkvkr.........vlepGlhfklPfgekvtvvstrvqtldvsdesvtvptkDglnvtvdvtvryrv..sdakkliaavaqeeenlenllrrllesalrevlsqmtldeil...............................................sn..........r.selaaelknelneqlqkygievvdvritdvdpppevkqalakkqaaeaeaaeaeiarae 176
                 +tv++g +++v  +G++k+          +++G+h+  Pf +++++v ++ +++d +     v+tkD++++++dv v++r+  +d+k+++ +v  ++++le  l++ +++a++++  + t  +++                                               ++          + +  ++++k +ln +++  gie++dv i+dvd+p +++++l++k + + +++ a+  +++
  MMETSP1325-20131115|2273_1  48 FTVPEGFYALVSYYGRIKDyegedgptdCWPAGFHWGGPFTKVLYLVTQQAIVFDAPC--RGVLTKDNVSISIDVAVVFRIleKDVKQFAVKV--NPKDLEIRLQAQVDQAVKNLGREITTRDAYglrsvrttvierqqtsaddgpagsnpmvdedekhgalaaeekydgmtEEehmaaqtaqvKgASATQNMKIALNRAFKSDGIEITDVIIKDVDLPSTIQRQLEEKTNVDSRNK-AQRMQQK 287
                 58*********99*********************************************..*********************************..*********************9999999997777777778887777777777766666666666666555555444400445555566644888888888888********************************9999994.4433333 PP

  == domain 2    score: -7.4 bits;  conditional E-value: 5
  PF01145.20 118 selaaelknelneqlqkygievvdvritdvdppp.evkqalakkqaaeaeaaeaeiaraeae 178
                 ++ +a+l n++ e  +k  iev+ ++ +d ++ + e +q + +  +a++ +a+ae++r e+e
  MMETSP1325-20131115|2273_1 329 QKAKADLNNQIEEIRRKAEIEVEAIK-QDTQLQKaESEQIVKATLTAHEAQAKAEAQRVETE 389
                 55667777777777788888888555.44444443333334444444444445555555544 PP

>> PF13421.1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.6   4.3e+03     157     185 ..     134     162 ..     116     166 .. 0.64
   2 !   17.3   0.1   8.4e-07    0.0023     148     209 ..     214     275 ..     195     277 .. 0.86
   3 ?   -2.8   0.3       1.2   3.4e+03     134     183 ..     299     348 ..     291     380 .. 0.45
   4 ?   -2.7   0.6       1.2   3.2e+03     145     189 ..     363     409 ..     323     433 .. 0.59

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1.6
   PF13421.1 157 ldlaanseelseklreaikkelaeyGlel 185
                   ++ n ++l  +l++++++ ++++G e+
  MMETSP1325-20131115|2273_1 134 FAVKVNPKDLEIRLQAQVDQAVKNLGREI 162
                 44455566667777777777777777665 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 8.4e-07
   PF13421.1 148 llkeskipvldlaanseelseklreaikkelaeyGleleellienislpeevekaldkrssm 209
                 + +e+++++   + + ++ +++++ a+++ +++ G+e++++ i+++ lp +++++l+++++ 
  MMETSP1325-20131115|2273_1 214 MTEEEHMAAQTAQVKGASATQNMKIALNRAFKSDGIEITDVIIKDVDLPSTIQRQLEEKTNV 275
                 5566777777777777888899999*********************************9986 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 1.2
   PF13421.1 134 seqlrslivtrfsdllkeskipvldlaanseelseklreaikkelaeyGl 183
                  ++l++   +++s++ +e    v  ++ + ++  + l+++i++  ++  +
  MMETSP1325-20131115|2273_1 299 IQKLKQSNGEAISQAEGERDRDVNAVTVELQKAKADLNNQIEEIRRKAEI 348
                 55555555555555544444333333333333333333333332222222 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 1.2
   PF13421.1 145 fsdllkeskipvldla..anseelseklreaikkelaeyGleleell 189
                  s+ + ++++++ + +  a+ +++ ++ ++ +k+++a+  le  +++
  MMETSP1325-20131115|2273_1 363 ESEQIVKATLTAHEAQakAEAQRVETETEAYVKTTMARAELESAKFK 409
                 34444444555444330033445555555566666655555555554 PP

>> PF10501.4  Ribosomal subunit 39S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.3   3.5e-05     0.095      50     102 ..     240     292 ..     207     301 .. 0.92
   2 ?    0.5   0.3      0.18     5e+02      52     102 ..     301     361 ..     295     371 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.5e-05
   PF10501.4  50 lkrlqqslGhiipDyelsklhtvedlveflekktrpkpeklpnaivlrkedfe 102
                 l+r ++s G++i+D ++  +  ++ + + le+kt+++ + ++  ++++ke ++
  MMETSP1325-20131115|2273_1 240 LNRAFKSDGIEITDVIIKDVDLPSTIQRQLEEKTNVDSRNKAQRMQQKKEVQS 292
                 789999***************************************99988765 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.18
   PF10501.4  52 rlqqslGhiipDyelsklhtvedlveflek..........ktrpkpeklpnaivlrkedfe 102
                 +l qs G  i+  e  +   v  +  +l+k          + r+k e +++ai++++++++
  MMETSP1325-20131115|2273_1 301 KLKQSNGEAISQAEGERDRDVNAVTVELQKakadlnnqieEIRRKAEIEVEAIKQDTQLQK 361
                 5556666666666666666666666666666666666666788899999999988888776 PP

>> PF12320.3  Type 5 capsule protein repressor C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.23   6.3e+02      33      56 ..     136     159 ..     128     182 .. 0.87
   2 ?    1.5   0.2     0.095   2.6e+02      43      90 ..     260     299 ..     230     307 .. 0.63
   3 ?    8.6   6.0    0.0006       1.6       6      81 ..     284     367 ..     279     388 .. 0.67

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.23
   PF12320.3  33 ievtdedylpdlqqrlqellegkn 56 
                 ++v   d +  lq++++++++++ 
  MMETSP1325-20131115|2273_1 136 VKVNPKDLEIRLQAQVDQAVKNLG 159
                 78888999999********99984 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.095
   PF12320.3  43 dlqqrlqellegknvevlrirrerkrteksleeeeneeleelspeevF 90 
                 dl   +q  le+k      ++ ++k ++     ++++e++  +  ev+
  MMETSP1325-20131115|2273_1 260 DLPSTIQRQLEEK----TNVDSRNKAQR----MQQKKEVQSTTFAEVI 299
                 4555566666666....55555555544....3455555555555554 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.0006
   PF12320.3   6 levik....gdleeilaql.........eaesdeel....awleievtdedylpdlqqrlqellegknvevlrirrerkrteksleeeeneel 81 
                 ++  k     +++e++++l         +ae         +   ++v+ +++ +dl+++++e+  ++++ev  i+ + + +++     e e++
  MMETSP1325-20131115|2273_1 284 MQQKKevqsTTFAEVIQKLkqsngeaisQAE----GerdrDVNAVTVELQKAKADLNNQIEEIRRKAEIEVEAIKQDTQLQKA-----ESEQI 367
                 4444455558899999999766664433223....134559**********************88775555555555544444.....33333 PP

>> PF13550.1  Putative phage tail protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.3      0.16   4.5e+02      37     107 ..     186     266 ..     172     296 .. 0.74
   2 ?    8.1   6.1   0.00067       1.8      48     133 ..     303     401 ..     278     432 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.16
   PF13550.1  37 svytltdddlvdgddg.......epleltraaeaelpnevrveyidpandyqaavveardaaeig...rrvstvelpgvls 107
                 ++ +    ++vd+d+        e+++   ++e  ++++++v+   + ++ + a  +a   ++i+   ++ ++v+lp +  
  MMETSP1325-20131115|2273_1 186 DDGPAGSNPMVDEDEKhgalaaeEKYDGMTEEEHMAAQTAQVKGASATQNMKIALNRAFKSDGIEitdVIIKDVDLPSTIQ 266
                 556666677777777555555322444446777789999999999999999999999999999999898999999987665 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00067
   PF13550.1  48 dgddgepleltraaeaelpnevrveyidpandyqaavveardaaeig.............rrvstvelpgvlsaaqArrlaerlLaearaeretvrfkl 133
                 + ++ge++++   + +  +n+v+ve + +++d + +++e+r+ aei+             + ++ v++ ++  +aqA++ a+r   e+ a  +t   + 
  MMETSP1325-20131115|2273_1 303 KQSNGEAISQAEGERDRDVNAVTVELQKAKADLNNQIEEIRRKAEIEveaikqdtqlqkaESEQIVKATLTAHEAQAKAEAQRVETETEAYVKTTMARA 401
                 456778999999999999************************999988888899999988778888888888888888888887666665555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1967  (0.143871); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.04u 0.37s 00:00:01.41 Elapsed: 00:00:00.69
# Mc/sec: 1764.27
//
Query:       MMETSP1325-20131115|2279_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-17   61.9   0.3    5.4e-17   61.0   0.2    1.5  1  PF04117.7 Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   0.2     4e-21   5.4e-17       1      66 [.     100     164 ..     100     166 .. 0.97

  Alignments for each domain:
  == domain 1    score: 61.0 bits;  conditional E-value: 4e-21
   PF04117.7   1 msllegksleeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvnlvslgWntyLSlik 66 
                 m+l+ gk+ e+i+  +k+ ++ +  ++w+ W+++ +inFa++P ++r+ ++n v++g+n++LS+i 
  MMETSP1325-20131115|2279_1 100 MGLFDGKP-ETIIPTIKKLMFVAVSSSWKCWIPAHTINFALIPSNLRLFYINAVQIGFNCFLSIIG 164
                 899*****.******************************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.64
# Mc/sec: 636.53
//
Query:       MMETSP1325-20131115|2280_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-05   22.3   0.0    4.9e-05   22.2   0.0    1.2  1  PF00176.18 SNF2 family N-terminal domain


Domain annotation for each model (and alignments):
>> PF00176.18  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   3.6e-09   4.9e-05       1      42 [.      88     124 ..      53     127 .] 0.82

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 3.6e-09
                 TTT---HHHHHHHT---...---B---------HHHHHHHH. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00176.18   1 yQkegvawllrreakklsvrggiLademGLGKTlqvialita 42 
                 +Qk gv w ++ ++       +++ade GLGKT+q ia+ ta
  MMETSP1325-20131115|2280_1  88 FQKVGVYWGAHTKKG-----RCLIADEPGLGKTIQSIAIATA 124
                 566666666666644.....47****************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 634.04
//
Query:       MMETSP1325-20131115|2280_2  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 221.88
//
Query:       MMETSP1325-20131115|2281_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.09   11.1   0.2       0.13   10.7   0.1    1.2  1  PF09364.5  XFP N-terminal domain
       0.14   12.1   0.6       0.55   10.1   0.1    2.1  2  PF00547.13 Urease, gamma subunit


Domain annotation for each model (and alignments):
>> PF09364.5  XFP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   1.9e-05      0.13     300     346 ..      64     110 ..      51     127 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 1.9e-05
   PF09364.5 300 rahqvPlalarentaklelleeWlksykpeelfdedgslkeelkela 346
                   hqv  +lar+ +++l +l+ W++  ++ e ++ + s k+++k + 
  MMETSP1325-20131115|2281_1  64 EIHQVLAKLARQVQQDLIKLDRWMEKVQASEAYNLHNSAKTGVKRHH 110
                 67****************************************98764 PP

>> PF00547.13  Urease, gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.14   9.6e+02      15      31 ..      68      84 ..      54     127 .. 0.73
   2 ?   10.1   0.1   8.1e-05      0.55      22      66 ..     176     220 ..     155     226 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.14
                HHHHHHHHHHH----B- CS
  PF00547.13 15 taaelarrrkarglkLn 31
                ++a+lar+ ++  +kL+
  MMETSP1325-20131115|2281_1 68 VLAKLARQVQQDLIKLD 84
                46778887777777775 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 8.1e-05
                 HHHH----B-HHHHHHHHHHHHH--------HHHHHH----SS-G CS
  PF00547.13  22 rrkarglkLnhpEavaliaaevlelardgktvaelmelgkklLtr 66 
                 r+   g +L+ +Ea+ ++++++  +ar   +v+++m++++  ++r
  MMETSP1325-20131115|2281_1 176 RKTGSGKELDASEACLILSDSLSMMARSAGNVSHMMDSARCEMER 220
                 56677999*****************************99876666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       612  (0.044763); expected 273.4 (0.02)
Passed bias filter:                      446  (0.0326214); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1000.58
//
Query:       MMETSP1325-20131115|2282_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 660.22
//
Query:       MMETSP1325-20131115|2283_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   12.0   0.0      0.061   11.9   0.0    1.1  1  PF14456.1 Alpha-helical domain 2


Domain annotation for each model (and alignments):
>> PF14456.1  Alpha-helical domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.5e-06     0.061     110     167 ..      35      98 ..      13     107 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.5e-06
   PF14456.1 110 dviyrasalglsiltPevildlasyiyWdged......Deeealevleeedededeatieeald 167
                 +v +ra a g +++tP+ ++ + +y   +++        e+ea+++  ++++++d+a ++ a++
  MMETSP1325-20131115|2283_1  35 KVVQRATADGFHLFTPAQAAAYTGYNGHYCKLyanitqGETEARDAYAGFCDEVDMASRALAEE 98 
                 6899***************999999766666578999999****************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 519.96
//
Query:       MMETSP1325-20131115|2285_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 374.17
//
Query:       MMETSP1325-20131115|2284_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-19   69.3   0.0    3.8e-19   68.9   0.0    1.0  1  PF08547.7 Complex I intermediate-associated protein 30 (CIA30)


Domain annotation for each model (and alignments):
>> PF08547.7  Complex I intermediate-associated protein 30 (CIA30)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.0   2.8e-23   3.8e-19      18     146 ..       2     137 ..       2     146 .. 0.90

  Alignments for each domain:
  == domain 1    score: 68.9 bits;  conditional E-value: 2.8e-23
   PF08547.7  18 kvmGGlSksslels..kedktavFsGnlslenrgGFasvrt.....kkrkesldlseyeglelrvk.GdgrtYklnlktesk.qsglsyqadfetk.kgewqtvkipfsdfvptfrGrvvedapeldlskiksigllls 146
                 +vmGG+S ++      +   ++v+sG++s++n+gGF++v        +   ++d+s+ +g+el+v+   g +Y ++l+t ++ +   s++a+f+t+ +gew tv++pf+ f+ +  G    + ++ld+s+++++gll  
  MMETSP1325-20131115|2284_1   2 RVMGGVSVAAAAPGtiDGRACVVLSGEVSTANNGGFVQVAVdlsaaEDPMATVDASAWDGIELDVRcPRGEDYNVHLRTPQCtRVFSSFRATFPTTdGGEWGTVRVPFDVFRGHGPGA---EGEALDVSQLRRLGLLGI 137
                 69**********99886779*********************99998889999**************7678**********8878899*******997888************997774...45789*********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 705.34
//
Query:       MMETSP1325-20131115|2286_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   12.5   0.0       0.11   11.6   0.0    1.5  1  PF12913.2 SH3 domain of the SH3b1 type


Domain annotation for each model (and alignments):
>> PF12913.2  SH3 domain of the SH3b1 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.8e-06      0.11       5      32 ..      95     122 ..      91     123 .] 0.84

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.8e-06
                 -TT---------TTEEEEE------BB- CS
   PF12913.2   5 dpklagegypFDrlqeSalhpgtPVlil 32 
                 d ++  ++++FD+l+e + + g PV++l
  MMETSP1325-20131115|2286_1  95 DGREVLNDVDFDQLKEDLMWEGSPVAVL 122
                 55555679******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 566.83
//
Query:       MMETSP1325-20131115|2287_1  [L=300]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.3e-06   27.0   0.4    3.1e-05   23.8   0.3    2.3  2  PF13474.1 SnoaL-like domain
  ------ inclusion threshold ------
      0.017   15.4   0.0      0.033   14.4   0.0    1.4  1  PF12680.2 SnoaL-like domain
      0.025   14.3   0.0       0.04   13.7   0.0    1.4  1  PF13577.1 SnoaL-like domain
      0.053   12.8   0.1      0.097   12.0   0.1    1.3  1  PF08952.6 Domain of unknown function (DUF1866)


Domain annotation for each model (and alignments):
>> PF13474.1  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.3   9.2e-09   3.1e-05       3     117 ..      36     179 ..      34     182 .. 0.81
   2 ?   -2.8   0.0       1.6   5.3e+03      66      98 ..     236     266 ..     213     281 .. 0.57

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 9.2e-09
   PF13474.1   3 alldafyeaaeegDldallalfaddvvfigtgadelat.......greevraylkpdf........aktepisfeledvrvtvsgdvawvteeldlqak.adgsea...egqvrgtgvlrktdg..........gWkivhyhlS 117
                  + ++fy a++++++ ++  l+ d  + i++ +++ +        g+++v++ +++ f        + +++ +  +++v+v v+g++a+vt+ +++q +   g ++   ++   +t ++rk+            +W +vh+h+S
  MMETSP1325-20131115|2287_1  36 RMQKEFYRAMNQRNIRRMRPLWYDGSSEIQCVRPQFLVqgnkpvvGYDAVVKTWAQMFqmsnsnkdDRVKRSKTYPQSVHVVVQGTTALVTCVEEIQGSaIVGDPSpppRWKGTATSLYRKKVMydqhsetshsKWLLVHHHAS 179
                 56689******************9999999888777666777777*******************98899***************************865456777777744456666666653333333456669*******99 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 1.6
   PF13474.1  66 vrvtvsgdvawvteeldlqak.adgseaegqvrg 98 
                   v +++d+a + ++    +k ++gs+++   r 
  MMETSP1325-20131115|2287_1 236 EDVLEDDDLASALMDQ---LKsMGGSSSSSSGRK 266
                 4444555555444432...121444444444444 PP

>> PF12680.2  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   9.6e-06     0.033       3      73 ..      40     122 ..      39     154 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 9.6e-06
                 HHHHHHHTT-HHHHH..........HTEEEEEEEECTS--E---HHHHHHHTTHHH...CEECEEEEEEEEESSTTEEEEEEEE CS
   PF12680.2   3 aflaalnagdldala..........allapdvvwedpfgelrGrealraffralla...afpdlrfevedviadgdrvvvrwtv 73 
                 +f++a+n++++ +++          +++ p + ++++  ++ G +a+ + ++++++   ++ d r++    + +  +vvv++t+
  MMETSP1325-20131115|2287_1  40 EFYRAMNQRNIRRMRplwydgsseiQCVRPQFLVQGNK-PVVGYDAVVKTWAQMFQmsnSNKDDRVKRSKTYPQSVHVVVQGTT 122
                 79*************77777777777778888888876.59***************9997777777777776666666666554 PP

>> PF13577.1  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.2e-05      0.04       4      89 ..      29     128 ..      26     176 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHHHHH---TTT---HHHHHTTB--...---EEE---.....--B---HHHHHHH---HHHHH........--EEE----EEEE---EEEEEEE CS
   PF13577.1   4 edreeIrdlvaryaralDtkdaeeladlFte...davldfggvg...pgvlegrdairalvrealdgra........ltqHllsnplieldgdtAtgrwy 89 
                 edree+ +++  + ra+ +++   ++ l+ +   ++++++++++   +  + g da+++ ++++++           ++  +  + ++ ++g tA +++ 
  MMETSP1325-20131115|2287_1  29 EDREEVIRMQKEFYRAMNQRNIRRMRPLWYDgssEIQCVRPQFLvqgNKPVVGYDAVVKTWAQMFQMSNsnkddrvkRSKTYPQSVHVVVQGTTALVTCV 128
                 8****************************99844555555555599888899999999999998875445556677788999999999999999999885 PP

>> PF08952.6  Domain of unknown function (DUF1866)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   2.8e-05     0.097      27      60 ..     223     256 ..     216     259 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.8e-05
                 T-EEEEEESS-HHHHHS--HHHHHHHHHH----- CS
   PF08952.6  27 DgtivvslasdedekeefdealieellqklaelG 60 
                 Dg  ++ ++sd de+   d++l ++l+++l+++G
  MMETSP1325-20131115|2287_1 223 DGGKIIVIESDGDEDVLEDDDLASALMDQLKSMG 256
                 8888899**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       487  (0.0356202); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1467.16
//
Query:       MMETSP1325-20131115|2289_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.8   0.0       0.12   11.7   0.0    1.1  1  PF11350.3 Protein of unknown function (DUF3152)


Domain annotation for each model (and alignments):
>> PF11350.3  Protein of unknown function (DUF3152)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.1e-06      0.12      47      81 ..      18      51 ..      10      59 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.1e-06
   PF11350.3 47 yggddafaaavdetLadprsWtadgklafervdeg 81
                y g+d+  a+ +++L+dp  + ad++ af++v+  
  MMETSP1325-20131115|2289_1 18 Y-GEDDGQAMYETVLNDPDKYKADKRPAFQHVAVA 51
                4.555667799********************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.53
# Mc/sec: 284.85
//
Query:       MMETSP1325-20131115|2290_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 281.11
//
Query:       MMETSP1325-20131115|2291_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-05   24.2   0.0    3.1e-05   23.6   0.0    1.4  1  PF09336.5 Vps4 C terminal oligomerisation domain
  ------ inclusion threshold ------
      0.025   13.5   0.1      0.027   13.5   0.0    1.0  1  PF09017.5 Microbial transglutaminase
      0.091   11.5   0.0        0.1   11.4   0.0    1.0  1  PF13929.1 mRNA stabilisation
       0.11   12.1   0.5       0.17   11.5   0.0    1.6  2  PF08181.6 DegQ (SacQ) family


Domain annotation for each model (and alignments):
>> PF09336.5  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0     9e-09   3.1e-05      15      59 ..      35      79 ..      24      80 .] 0.87

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 9e-09
                --CCCS-GGGB----B-HHHHHHHHHCS--SS-HHHHHHHHHHHH CS
   PF09336.5 15 mtwtdleeekllePpvtlkDflkalkttkptVskeDlekheeFtk 59
                m+ + le+++ l+  vt  Dfl+al+++  +V ++Dl k++++ k
  MMETSP1325-20131115|2291_1 35 MQKELLENKEALNTAVTQGDFLTALRKVNKSVGQDDLAKYNDWMK 79
                45555778899999****************************975 PP

>> PF09017.5  Microbial transglutaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   7.8e-06     0.027     215     261 ..      17      63 ..       7      79 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 7.8e-06
   PF09017.5 215 vmnkalenahdeeayldnlkkelankndallnedarssfysalrntp 261
                  m + +e+a +++  l+ ++kel ++++al +  ++ +f +alr+  
  MMETSP1325-20131115|2291_1  17 SMRRLMEEARKKGIGLEAMQKELLENKEALNTAVTQGDFLTALRKVN 63 
                 378999**************************************864 PP

>> PF13929.1  mRNA stabilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.9e-05       0.1      76     138 ..      16      78 ..      11      80 .] 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.9e-05
   PF13929.1  76 lkffkllniakkqqlslkkflndylllKkslgeeltkedLiefleiviknlksqkelnYsdLv 138
                 + + +l+ +a+k+ + l+ + ++ l  K +l++ +t+ d  + l  v k++ +++  +Y+d +
  MMETSP1325-20131115|2291_1  16 MSMRRLMEEARKKGIGLEAMQKELLENKEALNTAVTQGDFLTALRKVNKSVGQDDLAKYNDWM 78 
                 788999*********************************************999988899866 PP

>> PF08181.6  DegQ (SacQ) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.6   5.4e+03       7       8 ..      40      41 ..      35      49 .. 0.50
   2 ?   11.5   0.0   4.9e-05      0.17      26      41 ..      58      75 ..      53      80 .] 0.74

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.6
   PF08181.6  7 EE 8 
                 E
  MMETSP1325-20131115|2291_1 40 LE 41
                22 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 4.9e-05
   PF08181.6 26 SLrniNKSiDqyD..Kye 41
                +Lr++NKS+ q D  Ky+
  MMETSP1325-20131115|2291_1 58 ALRKVNKSVGQDDlaKYN 75
                69*******886633665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       766  (0.0560269); expected 273.4 (0.02)
Passed bias filter:                      656  (0.0479813); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 361.71
//
Query:       MMETSP1325-20131115|2295_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 187.95
//
Query:       MMETSP1325-20131115|2292_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.83u 0.37s 00:00:01.20 Elapsed: 00:00:00.55
# Mc/sec: 1102.32
//
Query:       MMETSP1325-20131115|2294_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.083   12.6   0.0       0.14   11.9   0.0    1.4  1  PF01556.13 DnaJ C terminal domain


Domain annotation for each model (and alignments):
>> PF01556.13  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     1e-05      0.14      16      45 ..      50      79 ..      45      81 .] 0.94

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1e-05
  PF01556.13 16 Ggtvevptldgrkikvkippgtkpgeklri 45
                Gg+++++  dgr  +v++p+g  pg  + +
  MMETSP1325-20131115|2294_1 50 GGKIQFQLSDGRMAEVQVPAGAGPGSTFQV 79
                9************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|2296_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|2288_1  [L=577]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-05   25.0   8.1    0.00091   19.0   2.4    3.8  2  PF01145.20 SPFH domain / Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.2    0.0014        19       2      62 ..     135     196 ..     134     244 .. 0.73
   2 !   19.0   2.4   6.7e-08   0.00091       2     169 ..     242     487 ..     241     528 .. 0.66

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0014
  PF01145.20   2 tvepgevgvvvrfGkvkrvlepG....lhfklPfgekvtvvstrvqtldvsdesvtvptkDglnv 62 
                 tv++gevg++v      ++ +pG     ++ + ++  + +v+ ++ +l  ++   t++t ++  v
  MMETSP1325-20131115|2288_1 135 TVPAGEVGLLVTDENDYIFAQPGmhniASWFIQPIGGCRRVDAQTNILHGNR---TIVTVEQGTV 196
                 7888888888888888888888866655564445777778888888888888...7777766544 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 6.7e-08
  PF01145.20   2 tvepgevgvvvrfGkvkrvlepGlhfklP..fgekvtvvstrvqtldvsdesvtvptkDglnvtvdvtvryrvsdakkliaav.......aqeeenlenllrrllesalrevlsqmtldeilsnrselaaelkneln......................................................................eqlqkygievvdvritdvdppp.evkqalakkqaaeaeaa.e 169
                 tv++g++++ +++G  +  l  G  f+l    ++  ++v +++qt d+++  v++ ++D++ + v++tv++r++d++k++a+         ++     + lr+ + +++ + l+ +  +  +sn  +++a++++                                                                         +    yg++v++++i +++p + ++ ++la+ + a a a   
  MMETSP1325-20131115|2288_1 242 TVDEGYAAITQNNGCQQV-LAGGHTFVLNhaKWRFEKFVTLKIQTDDLER--VEAASADNIVMCVNSTVVWRIEDVAKAAAMAtdtmalsGRKLSADITMLRNDVLKQAIASLAGFIGSVNYSNSFHVSAAAQRPASipavaelmdgdggggtealpkasapenpsefdgmaxqmmgtrtrtrthahthtravfdpqqmtaavehanATTMTYGCKVLSINIISANPVDrNLMESLASGAVAAAAALqA 487
                 89********88887776.55553333333333333366789********..*********************99999999887778555333333333444433333333345555555555533333333333333334444447777777777777777777777777777777777777777777777777777776666665557777788888887777777777777777766666666532 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       483  (0.0353277); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.92u 0.35s 00:00:01.27 Elapsed: 00:00:00.55
# Mc/sec: 2514.00
//
Query:       MMETSP1325-20131115|2298_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   14.1   3.6      0.022   13.9   2.5    1.0  1  PF07174.6 Fibronectin-attachment protein (FAP)


Domain annotation for each model (and alignments):
>> PF07174.6  Fibronectin-attachment protein (FAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   2.5   1.6e-06     0.022      17      89 ..      33     109 ..      24     113 .] 0.65

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.6e-06
   PF07174.6  17 tlaiaavagasa.valalPavanadPePaPsapPstaaaaPapaapvaepap..aaapapapadpnaaaP.papadP 89 
                 +l +a v +  + ++  +P+v++a P+  P+++P t++a  a++++ +++a       +++ a+  a aP p  a+P
  MMETSP1325-20131115|2298_1  33 ELVRALVNSERVeLVSDFPSVSSASPSSFPPVSPRTSTAGGASSSAAEAAAEeeMDVHTTEVAEEGAGAPdPMDAEP 109
                 566677777666355679*************9999999877765554444330033444466666666663355555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 588.67
//
Query:       MMETSP1325-20131115|2299_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|2300_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 753.85
//
Query:       MMETSP1325-20131115|2301_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.6   2.2       0.18   12.1   1.5    1.3  1  PF12168.3 DNA polymerase III subunits tau domain IV DnaB-binding


Domain annotation for each model (and alignments):
>> PF12168.3  DNA polymerase III subunits tau domain IV DnaB-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.5   1.3e-05      0.18      17      75 ..      20      80 ..       9      88 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.3e-05
   PF12168.3 17 seaasakkartSvLeR..lAqvqgrtervsqrqaaksae.ekekkeeaYRWrptkpve.kevk 75
                + ++ +++ar+S + R  lA++  + +++sq   ++ ++ e++++ee+  Wr ++ v+ +e++
  MMETSP1325-20131115|2301_1 20 AMPTEEERARASEIKRpsLASK--MFPSASQFVEDEDEQdEEKEEEEKSAWRHSNFVDgQEEE 80
                5689999999******667777..889999988555555489999999*******99955544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       691  (0.0505413); expected 273.4 (0.02)
Passed bias filter:                      452  (0.0330603); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 552.63
//
Query:       MMETSP1325-20131115|2308_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 762.92
//
Query:       MMETSP1325-20131115|2306_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-44  151.5   0.0    2.1e-44  151.3   0.0    1.1  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.3   0.0   1.6e-48   2.1e-44       2     155 .]       5     173 ..       4     173 .. 0.82

  Alignments for each domain:
  == domain 1    score: 151.3 bits;  conditional E-value: 1.6e-48
  PF00160.16   2 vdietss..kGrivieLfedkaPktvenFlklakeg....fYdgtkfhrvikgfmiqgGdpsgkga.......ngeekkagges.......ipdEikkk..klkh.krGalamartgpepnsngsqFfItlgdaphlDgkytvFGkVvegmdvvekieavetde.kpeknvkiksvgv 155
                 +++e+++  +Gr+v+ L++ ++Pkt+enF++l+  g     Y g++fhr+i+ fm+qgGd+++ +        +      + ++       ++dE + +  kl+h ++G+l+ma+ g  pn+ngsqFfIt+ ++p+lDgk+++FG+V egmd+v ++e+ +t + +p  +vki+s+gv
  MMETSP1325-20131115|2306_1   5 FELEIDGhrAGRLVLGLYGAAVPKTAENFRQLCS-GeqgfGYSGSEFHRIIPSFMLQGGDFTDGNGsggrsiyA------QRKNmmgkwegFADEWTAEgrKLQHaEPGVLSMANAG--PNTNGSQFFITTVPTPWLDGKHVIFGTVLEGMDLVHQVERLGTRNgQPRAQVKIVSCGV 173
                 6777766779***********************7.335578*******************98866644444432......3332333344588888655777777799******998..7**************************************9666666***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 1010.23
//
Query:       MMETSP1325-20131115|2297_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 670.09
//
Query:       MMETSP1325-20131115|2304_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 676.62
//
Query:       MMETSP1325-20131115|2311_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-10   39.3   0.6    3.7e-10   39.3   0.4    1.7  2  PF00520.26 Ion transport protein
     0.0091   14.3   0.1      0.012   13.9   0.1    1.2  1  PF08016.7  Polycystin cation channel


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2      0.14   9.8e+02      40     193 ..      13      22 ..       5      29 .. 0.49
   2 !   39.3   0.4   5.4e-14   3.7e-10       2      49 ..      66     115 ..      65     117 .] 0.93

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.14
                 XXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXX.XXXX CS
  PF00520.26  40 lvvlpslvslilrllnkasgllavlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvkekagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatlragskigyiyfvifiilgsfllln 193
                 +++++ lv                                                                                                                                                 +
  MMETSP1325-20131115|2311_1  13 VIIFVILV------------------------------------------------------------------------------------------------------------------------------------------------SS 22 
                 33333332................................................................................................................................................22 PP

  == domain 2    score: 39.3 bits;  conditional E-value: 5.4e-14
                 XXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXX.XXXXXXXXXXXXX CS
  PF00520.26   2 leyvftiiftlemllkiialgfkl..kftylrdpwnilDflvvlpslvsl 49 
                 l++   iif++e + k+ia+gf++  + +ylr+ wn +Df++v +s+v+l
  MMETSP1325-20131115|2311_1  66 LDVGASIIFMIELVTKVIAFGFLFngPESYLRSGWNQMDFVIVAISIVDL 115
                 6777889***************99***********************997 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   1.8e-06     0.012     219     258 ..      68     113 ..      53     116 .. 0.64

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.8e-06
   PF08016.7 219 lvfvlyfvveevlk.....irkeg.asylrsvwnlldlaivvlsvv 258
                 + + + f++e v+k     +  +g  sylrs wn++d++iv++s+v
  MMETSP1325-20131115|2311_1  68 VGASIIFMIELVTKviafgFLFNGpESYLRSGWNQMDFVIVAISIV 113
                 44444444444444111114557778*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 572.19
//
Query:       MMETSP1325-20131115|2310_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.60
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|2312_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:01.00
# Mc/sec: 395.40
//
Query:       MMETSP1325-20131115|2318_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|2321_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 555.95
//
Query:       MMETSP1325-20131115|2320_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|2323_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 901.03
//
Query:       MMETSP1325-20131115|2324_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|2325_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-13   49.6   3.4    4.1e-13   49.3   2.4    1.1  1  PF02466.14 Tim17/Tim22/Tim23/Pmp24 family
    4.6e-08   33.0   3.4    9.2e-08   32.0   1.1    2.2  2  PF10247.4  Reactive mitochondrial oxygen species modulator 1
  ------ inclusion threshold ------
      0.045   13.2   4.8       0.25   10.9   0.0    2.7  3  PF13488.1  Glycine zipper
       0.72    9.4   7.9          1    8.9   0.1    2.3  2  PF13436.1  Glycine-zipper containing OmpA-like membrane domain
        1.9    7.9  10.0       0.81    9.1   0.1    2.4  2  PF13441.1  YMGG-like Gly-zipper
        8.9    6.4   8.6         12    5.9   0.2    2.6  2  PF10439.4  Bacteriocin class II with double-glycine leader peptide


Domain annotation for each model (and alignments):
>> PF02466.14  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   2.4   1.8e-16   4.1e-13       7     102 ..      19     112 ..      13     115 .. 0.79

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 1.8e-16
  PF02466.14   7 vlagvagfalGavyGlfmrsmhaatklfrslplkeqlkavlramkqrspssaknfavvgaiYsgiecaleglr.gkndllnsvaAGaltGavlarrg 102
                 v   + g+ lGa +G++++ +++++  +++  l+   + ++ ++ +r+  sa++f++  ++Ysg++c ++ lr gk+dlln++ AG l+Ga+  +r+
  MMETSP1325-20131115|2325_1  19 VSNLLRGAQLGAGFGAIFGVYESFQHWNSG--LR-EPRIMVSHTISRTIGSAASFGTYLGVYSGTKCSMAVLRgGKQDLLNTATAGGLAGALSVLRS 112
                 66778999***********99544444433..33.455556666666677***********************99****************766655 PP

>> PF10247.4  Reactive mitochondrial oxygen species modulator 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   1.1     4e-11   9.2e-08      13      67 .]      24      82 ..      15      82 .. 0.85
   2 ?   -0.3   0.0      0.48   1.1e+03      20      35 ..      99     114 ..      97     116 .] 0.78

  Alignments for each domain:
  == domain 1    score: 32.0 bits;  conditional E-value: 4e-11
   PF10247.4 13 mGaaVGgafGllfGgyaalragl...g.prgllrtlgksvlgsaatFGffmsiGsviRc 67
                 Ga  G++fG++fG+y+++++ +   + pr +++++ + ++gsaa+FG+++++ s+ +c
  MMETSP1325-20131115|2325_1 24 RGAQLGAGFGAIFGVYESFQHWNsglRePRIMVSHTISRTIGSAASFGTYLGVYSGTKC 82
                5999****************9652223368889999999**************988777 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.48
   PF10247.4  20 afGllfGgyaalragl 35 
                 + G l G  ++lr g 
  MMETSP1325-20131115|2325_1  99 TAGGLAGALSVLRSGD 114
                 6788899999998875 PP

>> PF13488.1  Glycine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011      0.25       2      15 ..      25      38 ..      23      50 .. 0.84
   2 ?   -0.8   0.0      0.48   1.1e+03      17      35 ..      68      75 ..      56      84 .. 0.58
   3 ?    2.5   0.7     0.045     1e+02       3      12 ..      98     107 ..      96     110 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00011
   PF13488.1  2 GaaiGAaaGAaiGa 15
                Ga +GA+ GA++G 
  MMETSP1325-20131115|2325_1 25 GAQLGAGFGAIFGV 38
                99999999999995 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.48
   PF13488.1 17 aggagkGAliGAavGaaaG 35
                a+            G+++G
  MMETSP1325-20131115|2325_1 68 AS-----------FGTYLG 75
                22...........233333 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.045
   PF13488.1   3 aaiGAaaGAa 12 
                 a++G++aGA+
  MMETSP1325-20131115|2325_1  98 ATAGGLAGAL 107
                 3444444443 PP

>> PF13436.1  Glycine-zipper containing OmpA-like membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00045         1      70      90 ..      20      39 ..       9      48 .. 0.72
   2 ?    2.4   2.6     0.044     1e+02      50      91 ..      66     108 ..      55     114 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00045
   PF13436.1 70 aggagagaaiGAaaGllvGaa 90
                ++   +ga  GA+ G+++G+ 
  MMETSP1325-20131115|2325_1 20 SNL-LRGAQLGAGFGAIFGVY 39
                344.67888888888888875 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.044
   PF13436.1  50 esaaegaavGaavGAaagaaagg.agagaaiGAaaGllvGaaa 91 
                 + a  g+ +G   G   ++a+ + ++++ +  A aG+l+Ga++
  MMETSP1325-20131115|2325_1  66 SAASFGTYLGVYSGTKCSMAVLRgGKQDLLNTATAGGLAGALS 108
                 4556677777777776555433324888999999999999986 PP

>> PF13441.1  YMGG-like Gly-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.1   0.00036      0.81       4      18 ..      23      37 ..      18      48 .. 0.68
   2 ?    0.8   4.0      0.14   3.2e+02      31      41 ..      97     107 ..      61     109 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00036
                XXXXXXXXXXXXXXX CS
   PF13441.1  4 vaGAaiGAaaGAaiG 18
                ++GA +GA+ GA+ G
  MMETSP1325-20131115|2325_1 23 LRGAQLGAGFGAIFG 37
                455666666666544 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.14
                 ----------T CS
   PF13441.1  31 GAaaGalaGga 41 
                  A+aG+laG++
  MMETSP1325-20131115|2325_1  97 TATAGGLAGAL 107
                 57788888875 PP

>> PF10439.4  Bacteriocin class II with double-glycine leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.2    0.0054        12      34      61 ..      23      38 ..       7      42 .. 0.51
   2 ?    2.9   2.3     0.045     1e+02      46      54 ..      81     107 ..      56     113 .. 0.56

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0054
   PF10439.4 34 aaGalaGaatggavGglaGAlvGavvGa 61
                +             G+  GA +Ga+ G+
  MMETSP1325-20131115|2325_1 23 L------------RGAQLGAGFGAIFGV 38
                2............344445555555554 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.045
   PF10439.4  46 a..................vGglaGAl 54 
                                    +GglaGAl
  MMETSP1325-20131115|2325_1  81 KcsmavlrggkqdllntatAGGLAGAL 107
                 333333333444444333377777774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|2327_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 822.39
//
Query:       MMETSP1325-20131115|2319_1  [L=469]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-79  263.6   0.0    1.6e-78  262.6   0.0    1.4  2  PF12471.3  GTP cyclohydrolase N terminal
    2.6e-18   65.7   0.0    5.3e-18   64.7   0.0    1.5  1  PF00925.15 GTP cyclohydrolase II


Domain annotation for each model (and alignments):
>> PF12471.3  GTP cyclohydrolase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.6   0.0   2.3e-82   1.6e-78       3     194 ..      21     209 ..      19     210 .. 0.98
   2 ?   -3.4   0.0      0.78   5.3e+03      73     122 ..     336     382 ..     334     390 .. 0.59

  Alignments for each domain:
  == domain 1    score: 262.6 bits;  conditional E-value: 2.3e-82
   PF12471.3   3 erivltsypeqsgvkplpleWgaadakeRGPvvasrskeelkkrnaiGahsGsYsvYralavaagaleadhrpdltntepavkigpqpsWsdpkkivslDpfGhlvaevfkeeleegvdirPtiavtkahlklpelkeavekgrlkvDgkivlkkngdvavtkvavepvWyLPgvaerfgvseeeLrralfe 194
                 + i+lt++++q g++p++++Wgaa+a eRGP++a+  +++ ++rnaiGahsG YsvY+alava+g l+++++p +  t+p+vk+gp++sW+dpk+ivs+Dp+Gh+ + +f+e++++g+dirPtia+tkah++lpe kea++ grl++Dg+++++ +g+ ++tk+avepvW LPg+aerfg+se++Lr +lf+
  MMETSP1325-20131115|2319_1  21 SVITLTTHQGQFGANPISVKWGAATALERGPIIAT--TRHSSQRNAIGAHSGGYSVYKALAVATGGLDPKYQPKFDLTTPVVKMGPFNSWHDPKRIVSMDPYGHMPTIAFEEYVKKGYDIRPTIAITKAHIDLPECKEAIRVGRLTPDGDVLTH-DGQSHITKFAVEPVWNLPGIAERFGCSEASLRETLFK 209
                 5799*******************************..999****************************************************************************************************************99.9***********************************8 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 0.78
   PF12471.3  73 hrpdltntepavkigpqpsWsdpkkivslDpfGhlvaevfkeeleegvdi 122
                 h +  t+t+ ++ ++    W   +ki  l     + +  +++++++g+++
  MMETSP1325-20131115|2319_1 336 HVAGVTDTRFQALMPDPLVWLGVTKIHKLVS---MSNVKYDAITAAGIEV 382
                 6677777777777777777777777655433...3344455555555555 PP

>> PF00925.15  GTP cyclohydrolase II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.0   7.7e-22   5.3e-18      38     168 ..     246     387 ..     237     388 .. 0.83

  Alignments for each domain:
  == domain 1    score: 64.7 bits;  conditional E-value: 7.7e-22
  PF00925.15  38 isedepvlVRvHsecltgDvlgslrcdcgeqLdealeri...aee.grGvivylrqegrgiglleklraynlq.de.gldtveanlalgl....padeRdygigaqILrdlGvrki.rLltnnpekieaLegfglevvervp 168
                 ++e+ p +VRvH ec   Dv+gs  c+c++ L  a+e+    a+e g G+++y r+egr+ g + k+  yn + ++ g d++e+  +         d+R   +    L  lGv+ki +L++ ++ k++a++++g+evverv+
  MMETSP1325-20131115|2319_1 246 PDENVPLTVRVHDECNGSDVFGSDICTCRPYLTHAIEECiktAQEgGTGIVIYYRKEGRALGEVTKYLVYNMRkRQeGGDKAEEYFNCTQhvagVTDTRFQALMPDPLVWLGVTKIhKLVSMSNVKYDAITAAGIEVVERVA 387
                 4788899*************************9998864222335599************************98777889888753332234446788888888888*********779999999***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.84
# Mc/sec: 1337.97
//
Query:       MMETSP1325-20131115|2326_1  [L=467]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-30  101.8  21.2    2.4e-08   33.2   2.7    5.6  5  PF12799.2  Leucine Rich repeats (2 copies)
      1e-19   69.9  42.3    4.1e-07   29.5   4.9    4.7  6  PF13855.1  Leucine rich repeat
    2.6e-09   35.7  20.5       0.15   12.0   0.3    8.7  7  PF00560.28 Leucine Rich Repeat
    5.4e-07   28.6  19.2       0.95    9.8   0.1    8.6  8  PF13504.1  Leucine rich repeat
    3.7e-06   26.3  27.0       0.17   11.8   0.2    8.6  9  PF13516.1  Leucine Rich repeat
    0.00042   19.6  21.2      0.016   14.6   0.5    3.5  3  PF00612.22 IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.1   1.6e-11   3.8e-08       2      39 ..     140     176 ..     121     185 .. 0.94
   2 !   15.0   2.5   5.5e-06     0.013       3      39 ..     201     236 ..     199     236 .. 0.94
   3 !   33.2   2.7   1.1e-11   2.4e-08       3      43 ..     223     262 ..     221     265 .. 0.95
   4 !   19.7   1.1   1.8e-07   0.00041       3      43 ..     266     305 ..     266     306 .. 0.96
   5 !   21.0   0.0   7.2e-08   0.00016       2      36 ..     309     345 ..     308     358 .. 0.88

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 1.6e-11
   PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdl 39 
                  L++LdLs+N I +l + lanLp L+ Ln+s+N ++++
  MMETSP1325-20131115|2326_1 140 MLQTLDLSENFIDSLAE-LANLPYLTDLNCSSNSLTEV 176
                 59***************.*****************974 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 5.5e-06
   PF12799.2   3 LevLdLsnNnIkdlppelanLpnLktLnLsnNpisdl 39 
                 L+  +Ls+N+I  +   ++  + L +LnL++N+is++
  MMETSP1325-20131115|2326_1 201 LQRANLSDNQIDTIAD-ISHHSYLNSLNLNRNKISEI 236
                 88889***********.******************86 PP

  == domain 3    score: 33.2 bits;  conditional E-value: 1.1e-11
   PF12799.2   3 LevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43 
                 L +L+L++N+I+++ + +a+L+nL++L Ls+N+i+ +s L+
  MMETSP1325-20131115|2326_1 223 LNSLNLNRNKISEICG-VAGLKNLQVLRLSHNNIERISGLD 262
                 899*************.********************9986 PP

  == domain 4    score: 19.7 bits;  conditional E-value: 1.8e-07
   PF12799.2   3 LevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43 
                 L++L L nN+Ik +++ l + p L  L L +N is+l+ L 
  MMETSP1325-20131115|2326_1 266 LTELTLDNNQIKFIEN-LDKVPCLAKLALGSNEISSLDGLR 305
                 89**************.*********************996 PP

  == domain 5    score: 21.0 bits;  conditional E-value: 7.2e-08
   PF12799.2   2 nLevLdLsnNnIkdlppe..lanLpnLktLnLsnNpi 36 
                 +L +Ld ++N+I  + ++  l nLp L +L L++Npi
  MMETSP1325-20131115|2326_1 309 QLMYLDMASNQIAAVREVeyLENLPLLCSLVLTGNPI 345
                 799*********97766556****************9 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.4   7.1e-07    0.0016       3      40 ..     141     176 ..     135     180 .. 0.80
   2 !   25.1   3.7   4.3e-09   9.8e-06       3      61 .]     201     255 ..     199     255 .. 0.90
   3 !   29.5   4.9   1.8e-10   4.1e-07       2      61 .]     222     276 ..     221     276 .. 0.92
   4 !   21.1   0.8   7.5e-08   0.00017       3      61 .]     266     320 ..     264     320 .. 0.96
   5 !   19.6   0.1   2.2e-07   0.00049       3      61 .]     288     345 ..     286     345 .. 0.93
   6 !   14.6   0.0   7.8e-06     0.018       2      43 ..     309     352 ..     308     375 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 7.1e-07
   PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksi 40 
                 L++LdLs N + ++++  + +l+ L+ L+ s+n+l+++
  MMETSP1325-20131115|2326_1 141 LQTLDLSENFIDSLAE--LANLPYLTDLNCSSNSLTEV 176
                 7888888888888886..78888888888888888775 PP

  == domain 2    score: 25.1 bits;  conditional E-value: 4.3e-09
   PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 L++ +Ls+N + +i+d + +  s L +L+L++n++++i  +  +gL++L+ L Ls+N++
  MMETSP1325-20131115|2326_1 201 LQRANLSDNQIDTIADISHH--SYLNSLNLNRNKISEI--CGVAGLKNLQVLRLSHNNI 255
                 66668**********97766..78**************..8999*************98 PP

  == domain 3    score: 29.5 bits;  conditional E-value: 1.8e-10
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                  L +L+L++N++++i+     gl+nL+vL Ls+nn+++is   ++gL  L+eL L++N++
  MMETSP1325-20131115|2326_1 222 YLNSLNLNRNKISEICG--VAGLKNLQVLRLSHNNIERISG--LDGL-PLTELTLDNNQI 276
                 699*************6..468*****************95..9***.7*********97 PP

  == domain 4    score: 21.1 bits;  conditional E-value: 7.5e-08
   PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 L+eL L+nN +k i+   + + + L +L L++n+++s++   + ++++L +L++ +N++
  MMETSP1325-20131115|2326_1 266 LTELTLDNNQIKFIE--NLDKVPCLAKLALGSNEISSLD--GLRKCEQLMYLDMASNQI 320
                 99************9..6********************8..59**************97 PP

  == domain 5    score: 19.6 bits;  conditional E-value: 2.2e-07
   PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksisp.eafkgLpsLreLnLsgNrl 61 
                 L +L L +N++++++   + +++ L++Ld  +n +  + + e +++Lp L +L L gN++
  MMETSP1325-20131115|2326_1 288 LAKLALGSNEISSLDG--LRKCEQLMYLDMASNQIAAVREvEYLENLPLLCSLVLTGNPI 345
                 7899**********96..9****************99977578***************87 PP

  == domain 6    score: 14.6 bits;  conditional E-value: 7.8e-06
   PF13855.1   2 nLkeLdLsnNrlkvipd.gaFkglsnLkvLdLsgnnl.ksispe 43 
                 +L++Ld  +N +  +++ +++++l+ L +L L+gn +  ++ pe
  MMETSP1325-20131115|2326_1 309 QLMYLDMASNQIAAVREvEYLENLPLLCSLVLTGNPIaPVVVPE 352
                 79*************666*****************995455554 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.1    0.0012       2.7       2      22 .]     141     160 ..     140     160 .. 0.89
   2 ?    5.0   0.0     0.014        31       2      16 ..     163     181 ..     162     186 .. 0.77
   3 ?    4.2   0.0     0.025        57       2      19 ..     201     217 ..     200     220 .. 0.82
   4 !    5.6   0.2    0.0083        19       2      16 ..     223     237 ..     222     242 .. 0.86
   5 !   12.0   0.3   6.7e-05      0.15       1      21 [.     244     263 ..     244     264 .. 0.87
   6 ?    5.2   0.3     0.011        26       2      17 ..     266     281 ..     265     307 .. 0.84
   7 ?    2.4   0.0     0.097   2.2e+02       2      14 ..     310     322 ..     309     362 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0012
                 ESEEEETSSBCBCHHHHHHHH CS
  PF00560.28   2 LeeLdLsgNnltslppslsnL 22 
                 L++LdLs N + sl + l nL
  MMETSP1325-20131115|2326_1 141 LQTLDLSENFIDSLAE-LANL 160
                 9**********99988.7776 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.014
                 ESEEEETSSBCBC....HH CS
  PF00560.28   2 LeeLdLsgNnlts....lp 16 
                 L+ L+ s+N+lt+    +p
  MMETSP1325-20131115|2326_1 163 LTDLNCSSNSLTEvlqyVP 181
                 899*********6555555 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.025
                 ESEEEETSSBCBCHHHHH CS
  PF00560.28   2 LeeLdLsgNnltslppsl 19 
                 L++ +Ls+N++ ++ + +
  MMETSP1325-20131115|2326_1 201 LQRANLSDNQIDTIAD-I 217
                 8999*******99876.5 PP

  == domain 4    score: 5.6 bits;  conditional E-value: 0.0083
                 ESEEEETSSBCBCHH CS
  PF00560.28   2 LeeLdLsgNnltslp 16 
                 L +L+L++N+++++ 
  MMETSP1325-20131115|2326_1 223 LNSLNLNRNKISEIC 237
                 789*********986 PP

  == domain 5    score: 12.0 bits;  conditional E-value: 6.7e-05
                 TESEEEETSSBCBCHHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslppslsn 21 
                 nL++L Ls+Nn++ ++  l +
  MMETSP1325-20131115|2326_1 244 NLQVLRLSHNNIERISG-LDG 263
                 8************9987.655 PP

  == domain 6    score: 5.2 bits;  conditional E-value: 0.011
                 ESEEEETSSBCBCHHH CS
  PF00560.28   2 LeeLdLsgNnltslpp 17 
                 L+eL L++N+++ + +
  MMETSP1325-20131115|2326_1 266 LTELTLDNNQIKFIEN 281
                 89*********98655 PP

  == domain 7    score: 2.4 bits;  conditional E-value: 0.097
                 ESEEEETSSBCBC CS
  PF00560.28   2 LeeLdLsgNnlts 14 
                 L +Ld+ +N++  
  MMETSP1325-20131115|2326_1 310 LMYLDMASNQIAA 322
                 7788888888863 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0      0.01        24       3      16 ..     141     154 ..     139     157 .. 0.88
   2 !    7.6   0.1    0.0022       4.9       1      16 [.     161     176 ..     161     178 .. 0.91
   3 ?   -0.7   0.0       1.3   2.9e+03       7      16 ..     205     214 ..     201     215 .. 0.87
   4 ?    2.5   0.3      0.11   2.5e+02       2      16 ..     222     236 ..     221     237 .. 0.85
   5 !    9.8   0.1   0.00042      0.95       2      16 ..     244     258 ..     243     265 .. 0.83
   6 ?    4.8   0.1     0.018        42       3      15 ..     266     278 ..     266     282 .. 0.88
   7 ?    2.7   0.0     0.095   2.2e+02       1      16 [.     286     301 ..     286     302 .. 0.90
   8 ?    0.1   0.0      0.71   1.6e+03       3      13 ..     310     320 ..     309     333 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.01
   PF13504.1   3 LkeLdLsgnrLtsL 16 
                 L++LdLs n ++sL
  MMETSP1325-20131115|2326_1 141 LQTLDLSENFIDSL 154
                 9********99987 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0022
   PF13504.1   1 pnLkeLdLsgnrLtsL 16 
                 p+L++L+ s+n+Lt++
  MMETSP1325-20131115|2326_1 161 PYLTDLNCSSNSLTEV 176
                 78***********985 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1.3
   PF13504.1   7 dLsgnrLtsL 16 
                 +Ls+n+++++
  MMETSP1325-20131115|2326_1 205 NLSDNQIDTI 214
                 69****9986 PP

  == domain 4    score: 2.5 bits;  conditional E-value: 0.11
   PF13504.1   2 nLkeLdLsgnrLtsL 16 
                 +L  L+L++n++ ++
  MMETSP1325-20131115|2326_1 222 YLNSLNLNRNKISEI 236
                 7889******99865 PP

  == domain 5    score: 9.8 bits;  conditional E-value: 0.00042
   PF13504.1   2 nLkeLdLsgnrLtsL 16 
                 nL++L+Ls+n+++ +
  MMETSP1325-20131115|2326_1 244 NLQVLRLSHNNIERI 258
                 9*********98754 PP

  == domain 6    score: 4.8 bits;  conditional E-value: 0.018
   PF13504.1   3 LkeLdLsgnrLts 15 
                 L+eL L +n+++ 
  MMETSP1325-20131115|2326_1 266 LTELTLDNNQIKF 278
                 89********875 PP

  == domain 7    score: 2.7 bits;  conditional E-value: 0.095
   PF13504.1   1 pnLkeLdLsgnrLtsL 16 
                 p+L +L L +n++ sL
  MMETSP1325-20131115|2326_1 286 PCLAKLALGSNEISSL 301
                 6899********9987 PP

  == domain 8    score: 0.1 bits;  conditional E-value: 0.71
   PF13504.1   3 LkeLdLsgnrL 13 
                 L +Ld ++n++
  MMETSP1325-20131115|2326_1 310 LMYLDMASNQI 320
                 889*****987 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0023       5.2       4      16 ..     141     153 ..     138     159 .. 0.83
   2 ?    3.1   0.3     0.053   1.2e+02       1      15 [.     160     174 ..     160     177 .. 0.87
   3 ?    3.5   0.0     0.039        89       4      16 ..     201     213 ..     199     218 .. 0.76
   4 !    5.7   0.1    0.0073        17       4      17 ..     223     236 ..     220     240 .. 0.83
   5 !   11.8   0.2   7.7e-05      0.17       1      15 [.     242     256 ..     242     264 .. 0.85
   6 ?    3.5   0.3     0.039        88       4      14 ..     266     276 ..     265     283 .. 0.91
   7 ?   -0.5   0.0      0.75   1.7e+03       4      16 ..     288     300 ..     277     305 .. 0.60
   8 ?    3.9   0.0     0.029        67       1      14 [.     307     320 ..     307     322 .. 0.94
   9 ?   -2.7   0.1       3.9     9e+03       3      14 ..     334     345 ..     332     345 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0023
   PF13516.1   4 LtsLdLsnNqigd 16 
                 L++LdLs N i++
  MMETSP1325-20131115|2326_1 141 LQTLDLSENFIDS 153
                 9********9987 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.053
   PF13516.1   1 lknLtsLdLsnNqig 15 
                 l+ Lt+L+ s+N ++
  MMETSP1325-20131115|2326_1 160 LPYLTDLNCSSNSLT 174
                 577*********998 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.039
   PF13516.1   4 LtsLdLsnNqigd 16 
                 L+  +Ls+Nqi+ 
  MMETSP1325-20131115|2326_1 201 LQRANLSDNQIDT 213
                 55559******86 PP

  == domain 4    score: 5.7 bits;  conditional E-value: 0.0073
   PF13516.1   4 LtsLdLsnNqigde 17 
                 L sL+L++N+i+ +
  MMETSP1325-20131115|2326_1 223 LNSLNLNRNKISEI 236
                 779********975 PP

  == domain 5    score: 11.8 bits;  conditional E-value: 7.7e-05
   PF13516.1   1 lknLtsLdLsnNqig 15 
                 lknL++L+Ls+N+i 
  MMETSP1325-20131115|2326_1 242 LKNLQVLRLSHNNIE 256
                 79***********96 PP

  == domain 6    score: 3.5 bits;  conditional E-value: 0.039
   PF13516.1   4 LtsLdLsnNqi 14 
                 Lt+L L nNqi
  MMETSP1325-20131115|2326_1 266 LTELTLDNNQI 276
                 9*********9 PP

  == domain 7    score: -0.5 bits;  conditional E-value: 0.75
   PF13516.1   4 LtsLdLsnNqigd 16 
                 L  L L++N i++
  MMETSP1325-20131115|2326_1 288 LAKLALGSNEISS 300
                 3334489999987 PP

  == domain 8    score: 3.9 bits;  conditional E-value: 0.029
   PF13516.1   1 lknLtsLdLsnNqi 14 
                 + +L++Ld+ +Nqi
  MMETSP1325-20131115|2326_1 307 CEQLMYLDMASNQI 320
                 889**********9 PP

  == domain 9    score: -2.7 bits;  conditional E-value: 3.9
   PF13516.1   3 nLtsLdLsnNqi 14 
                  L sL L +N+i
  MMETSP1325-20131115|2326_1 334 LLCSLVLTGNPI 345
                 578999999998 PP

>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.5   7.1e-06     0.016       3      19 ..       6      22 ..       4      24 .. 0.94
   2 ?    3.5   2.0     0.027        60       6      19 ..      46      59 ..      45      60 .. 0.92
   3 !   11.6   2.3   6.8e-05      0.15       3      18 ..      69      84 ..      67      86 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7.1e-06
                HHHHHHHHHHHHHHHCH CS
  PF00612.22  3 aaikIQaawRgylaRkr 19
                aa+k+Q+  Rg +aRkr
  MMETSP1325-20131115|2326_1  6 AATKLQSISRGRKARKR 22
                9***************8 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.027
                HHHHHHHHHHHHCH CS
  PF00612.22  6 kIQaawRgylaRkr 19
                kIQaa Rg  aR++
  MMETSP1325-20131115|2326_1 46 KIQAAQRGRAARQQ 59
                8***********97 PP

  == domain 3    score: 11.6 bits;  conditional E-value: 6.8e-05
                HHHHHHHHHHHHHHHC CS
  PF00612.22  3 aaikIQaawRgylaRk 18
                aa++IQa +Rg  aR+
  MMETSP1325-20131115|2326_1 69 AATRIQAIYRGRAARR 84
                9**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       704  (0.0514921); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.87u 0.34s 00:00:01.21 Elapsed: 00:00:00.50
# Mc/sec: 2238.20
//
Query:       MMETSP1325-20131115|2328_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.31   11.0   3.4       0.33   11.0   2.4    1.0  1  PF01169.14 Uncharacterized protein family UPF0016


Domain annotation for each model (and alignments):
>> PF01169.14  Uncharacterized protein family UPF0016
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.4   2.4e-05      0.33      39      72 ..       2      35 ..       1      36 [. 0.93

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 2.4e-05
  PF01169.14 39 atlAlllvtllavllGkllakllperllklvaal 72
                a++A+++++++av+ G ++ + ++ ++ + ++++
  MMETSP1325-20131115|2328_1  2 AAAAVVVAAAVAVAPGVWVESTTSVTWANAAGGA 35
                5789*************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 164.19
//
Query:       MMETSP1325-20131115|2330_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 811.40
//
Query:       MMETSP1325-20131115|2329_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   13.9   0.1       0.05   13.1   0.1    1.7  1  PF01390.15 SEA domain
      0.093   12.2   0.0       0.14   11.7   0.0    1.3  1  PF13661.1  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF01390.15  SEA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   7.2e-06      0.05      49      73 ..     111     135 ..      63     145 .] 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.2e-06
  PF01390.15  49 largykqaevlslrkgsVvvdfwvv 73 
                 la + +q+ ++s++ gsVvvd++++
  MMETSP1325-20131115|2329_1 111 LALEPVQVDISSFTAGSVVVDMVII 135
                 447789****************987 PP

>> PF13661.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     2e-05      0.14      25      50 ..      37      78 ..      23      85 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2e-05
   PF13661.1 25 dpHiDadpsql...............gkprflsallYLN.ed 50
                 +HiDa+p q+               + +rf+s+++ L+ +d
  MMETSP1325-20131115|2329_1 37 RMHIDAHPIQTmkssttnasalgvknRPRRFYSVVFTLTlHD 78
                69***********************87777888888777555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       462  (0.0337917); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 709.13
//
Query:       MMETSP1325-20131115|2332_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|2331_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.32s 00:00:00.89 Elapsed: 00:00:00.78
# Mc/sec: 851.01
//
Query:       MMETSP1325-20131115|2334_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-15   56.8   6.1    1.8e-15   56.7   4.2    1.0  1  PF03741.11 Integral membrane protein TerC family


Domain annotation for each model (and alignments):
>> PF03741.11  Integral membrane protein TerC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   4.2   1.3e-19   1.8e-15      11      72 ..       2      65 ..       1      66 [] 0.97

  Alignments for each domain:
  == domain 1    score: 56.7 bits;  conditional E-value: 1.3e-19
  PF03741.11 11 svDNlvvialivak..lpeeqqkkalllGilgAlvlRilllllasallelfdlilligglfLly 72
                svDNl+v+ +++++  +p e+q ++l +Gi+gA+++R++++++++a ++ f+ + li++++Ll+
  MMETSP1325-20131115|2334_1  2 SVDNLFVFLMLFNYfkVPLEYQGRVLNWGIIGAVLMRGVMIAVGVAAVQRFQSVILIFAAILLV 65
                9************999********************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       477  (0.0348888); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|2338_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   12.7   0.0      0.068   12.4   0.0    1.1  1  PF10120.4 Putative aldolase
      0.066   11.7   0.1      0.074   11.5   0.1    1.0  1  PF12297.3 Ellis van Creveld protein 2 like protein
      0.079   12.7   0.2      0.098   12.4   0.1    1.1  1  PF13863.1 Domain of unknown function (DUF4200)
      0.084   12.6   0.1       0.12   12.1   0.1    1.3  1  PF09058.5 L27_1


Domain annotation for each model (and alignments):
>> PF10120.4  Putative aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     2e-05     0.068      43     102 ..       5      64 ..       4      85 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2e-05
                 E---EEE----EEE---EE----CHHHHHHHHHHCC-TT--EEEEEE--HHHHHHHHCTT CS
   PF10120.4  43 vpGRIvrvkgkvkavgppefGaskhvArllLaamekdpeiraainirydeeivealkklg 102
                 + G++ ++ + v+a++++e G+++  A   + a ++  ++ + +n  ++e++ + lk ++
  MMETSP1325-20131115|2338_1   5 FSGDLLTYSDFVRAMMKVELGVKREEAARAVDALRHTHSAVSHANKTNEERLATYLKMMQ 64 
                 78999**********************************************999998765 PP

>> PF12297.3  Ellis van Creveld protein 2 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   2.2e-05     0.074     346     413 ..      14      81 ..       7      91 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.2e-05
   PF12297.3 346 DfllaskrylLeerfaqReylvkklqsqesrvkkllntaatqlanliqkmrragkLdeeqlemlkera 413
                 Df+ a  +  L  +  +    v +l+++ s v++   t   +la  ++ m+ +g+L+++ l+++ke+a
  MMETSP1325-20131115|2338_1  14 DFVRAMMKVELGVKREEAARAVDALRHTHSAVSHANKTNEERLATYLKMMQDNGTLSADSLKTMKEKA 81 
                 788888888887777777777999******************************************98 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   2.9e-05     0.098      12      72 ..      20      80 ..      16      83 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.9e-05
   PF13863.1 12 vqlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaeee 72
                ++ +l  kree++r   +l +  +++   +++++e+l  + k+++dn     + +k+++e+
  MMETSP1325-20131115|2338_1 20 MKVELGVKREEAARAVDALRHTHSAVSHANKTNEERLATYLKMMQDNGTLSADSLKTMKEK 80
                6779999****************************************99999999999886 PP

>> PF09058.5  L27_1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   3.5e-05      0.12       3      27 ..      26      50 ..      24      66 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.5e-05
                --HHHHHHHHHHHHHHHHT--SSS- CS
   PF09058.5  3 vkkkdaqRALqllEeyqsklsqtgD 27
                vk+++a RA+++l + +s +s+++ 
  MMETSP1325-20131115|2338_1 26 VKREEAARAVDALRHTHSAVSHANK 50
                9*****************9998764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       846  (0.0618783); expected 273.4 (0.02)
Passed bias filter:                      748  (0.0547104); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 452.65
//
Query:       MMETSP1325-20131115|2336_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-18   66.6   0.0    1.9e-18   66.1   0.0    1.2  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.0   1.4e-22   1.9e-18       5      93 ..     118     211 ..     114     212 .. 0.92

  Alignments for each domain:
  == domain 1    score: 66.1 bits;  conditional E-value: 1.4e-22
                 --CT-EEEEEEEEEE.---EEEETTT.TTCEEEEECCTTSS-HHHHHHHTTSBCTEEEEEEEEGGGT-S-TTCCTTT....S.TT-EEEEEEEE CS
  PF00254.23   5 akegdtVtvhyegkledgtvfdssys.rakpfefkvGsgqvikgleeglegmkvGekrtltippelaYgekglaggk....ippnatlvfevel 93 
                 + +g++  ++y+g l  g+vfds+ +  +kp+ fk+Gs+qvi g+e+ + +m  Ge+++  ip++laYgekg+        i+pn +l + ++l
  MMETSP1325-20131115|2336_1 118 PRTGSICIIDYTGFLPSGQVFDSTEKkGGKPLAFKLGSKQVIVGIEQVVSQMLPGEEVQALIPSDLAYGEKGVCTEGgeclIEPNTNLKYYIKL 211
                 789*********************66799*****************************************99844447899***********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.55
# Mc/sec: 954.19
//
Query:       MMETSP1325-20131115|2337_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-29  102.4   0.1    2.7e-29  102.2   0.1    1.0  1  PF10229.4 Uncharacterized conserved protein (DUF2246)


Domain annotation for each model (and alignments):
>> PF10229.4  Uncharacterized conserved protein (DUF2246)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.2   0.1   1.9e-33   2.7e-29     132     269 ..       2     138 ..       1     146 [. 0.93

  Alignments for each domain:
  == domain 1    score: 102.2 bits;  conditional E-value: 1.9e-33
   PF10229.4 132 iqecPellrkdleelFPvveaktnnitvltltqksendmtswseeveeerekllekFvegAkeicsrLrseGyWaDFidPssGraffgpytnatlfetderyrhlgfkiedlgcCkVirhelwgttvfvgtiftnAps 269
                 +++cP+ +r++l+ +F   ++ +  + + t  q+se d+ +++++ve e+++ l  F++  k+ic++Lrs GyWaD+idP sG++ + p+ n+   e d     + + i + + Ck++ h +wg+ v+  t+ft+Ap 
  MMETSP1325-20131115|2337_1   2 VCQCPKAMRRELKHVFTGKTVTDDWLALPT-NQHSEMDLVNVGDDVEFEKDRCLIVFMDFGKAICEQLRSCGYWADYIDPCSGLPMLTPNCNKVYSEVDGMQMLMHYPIMNAAMCKILLHPKWGSAVYPATVFTDAPF 138
                 79***************7777766666666.556*************************************************************9***999999*******************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 831.39
//
Query:       MMETSP1325-20131115|2339_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       652  (0.0476887); expected 273.4 (0.02)
Passed bias filter:                      492  (0.035986); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1098.71
//
Query:       MMETSP1325-20131115|2341_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|2343_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 739.74
//
Query:       MMETSP1325-20131115|2342_1  [L=489]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-51  172.9  20.2    5.5e-36  123.7   9.3    2.0  2  PF01490.13 Transmembrane amino acid transporter protein


Domain annotation for each model (and alignments):
>> PF01490.13  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.4   7.6e-19     1e-14       4      62 ..      32      90 ..      29     101 .. 0.90
   2 !  123.7   9.3     4e-40   5.5e-36      76     408 ..     165     478 ..     144     480 .. 0.87

  Alignments for each domain:
  == domain 1    score: 53.7 bits;  conditional E-value: 7.6e-19
  PF01490.13  4 salsavlnlikaivGaGvLaLPyAfkqlGllvGlillllvalislytlllLvkcsktla 62
                s  ++vl l+k ++GaG L+LPyAfkq+Gl+++li ++lv+l+s yt+  L +c +++ 
  MMETSP1325-20131115|2342_1 32 SDNEVVLALVKCAIGAGSLSLPYAFKQGGLWFSLIGTVLVGLLSAYTIICLKQCEEVVG 90
                5567899************************************************9986 PP

  == domain 2    score: 123.7 bits;  conditional E-value: 4e-40
  PF01490.13  76 yrllGpkgkliidlailvqlfGvgvsyliligdllpaifesffdtlhisnvyfilisaliiipLslirnlsaLsylSllaavsslyyivilvlvvaelvklelqgvseeavkkasklkglflaigiivFAfeghavllpiqnelkdpskfkkmtkvlllsiilvtvlyilvGlvGYltFGnevkgnillnlpkss....ilivivnvllvlalllsfplqlhplrevvenvlirkeavagasekkapkskllrlvirlllvvityliAlsvpslakvlslvGatsstslsfilPalfhlkliktekksleklilkkildlicivvglllvvyglavl 408
                 ++++ p +  ++++ i+++ +Gv+ +yl + + ++p++++       +  ++ +l+++ ++++L l+r ++ Ls++++l++v+++ +   l +v++ +  +++ + +     ++++ k++  ++g + F f+ h+v+lpi +  ++p++f    k +  s++++t l +++G++ Y+ F ++v+  ++ nl+  +    +  ++v++ll++ ll+++p+++ + re+ve  +  +    ++ ++++p +   r+++r++l+ ++++i + vp +++++ lvG +  +++ filP++++lkl+   + +++         +++  +g+++ v++l+++
  MMETSP1325-20131115|2342_1 165 HPTVKPIMTGVVNVGICLTSLGVCAAYLDFLAHTIPQVLDLGR---GFGELQATLAVLPVMLVLVLLRTFKVLSFTAVLGDVAVTSA---LLAVIVYGFATQEINLGL----PFINTKEVVKFVGAVSFLFAIHIVVLPILHASRNPESFG---KNIRSSFTFITGLNAIFGFLAYALFADDVQPAVTDNLDGGTsatkATLDAVKILLCVDLLFTVPFVFVAGREIVERAVLNQ----FKDGERTPSVMHIRNFVRVGLLGCVVAICFGVPCFGDMVNLVGGVVNATMGFILPPILKLKLFPGMSLAAKCA------HVAISAFGVAALVLTLIFT 478
                 56666777889*****************************965...59************************************863...333333333333344443....468889********************************9...899**********************************9888889999*****************************99887....99999**********************************************************9998666554......3667777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       495  (0.0362054); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.39s 00:00:01.20 Elapsed: 00:00:00.54
# Mc/sec: 2170.03
//
Query:       MMETSP1325-20131115|2335_1  [L=1015]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-23   81.2   0.3    1.5e-22   80.0   0.0    1.9  2  PF00005.22 ABC transporter
    2.2e-05   24.4   0.0      0.021   14.7   0.0    2.3  1  PF13304.1  AAA domain
    5.2e-05   22.4   0.0    0.00054   19.1   0.0    1.6  2  PF02463.14 RecF/RecN/SMC N terminal domain
  ------ inclusion threshold ------
      0.017   14.3   0.1       0.03   13.6   0.0    1.3  1  PF00664.18 ABC transporter transmembrane region
       0.02   14.9   3.3       0.22   11.5   2.3    2.4  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.031   14.0   0.1       0.41   10.4   0.1    2.6  1  PF13558.1  Putative exonuclease SbcCD, C subunit
      0.092   12.7   2.7       0.18   11.7   0.2    2.6  2  PF13401.1  AAA domain
       0.46    9.5   6.2        6.6    5.7   0.0    3.1  3  PF12846.2  AAA-like domain
          2    7.6   6.0       0.53    9.5   1.1    2.2  2  PF13481.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.0   0.0     1e-25   1.5e-22       1     118 []     654     775 ..     654     775 .. 0.94
   2 ?   -3.5   0.0       7.4   1.1e+04      37      76 ..     908     926 ..     868     953 .. 0.50

  Alignments for each domain:
  == domain 1    score: 80.0 bits;  conditional E-value: 1e-25
                 HHHHHHHTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--......----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk......srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 +T l+++ + ++ ++ge+ +d  +k l++ k + l   i++++q+   f +ltv+en++ +k+++ t ++ie++l++  l +++dk      +++ +LSgGqkqr+ +Ara++++pk+llLDE+t+
  MMETSP1325-20131115|2335_1 654 TTALAVIQRFYDVEKGEVLLD--GKPLKDWKPSFLAtqIAVVQQESAIF-DLTVEENVRWGKPDA-TIAEIENALKMAALWHDIDKkplrmkTNAMQLSGGQKQRLTIARAIVRNPKILLLDEATA 775
                 7999*****************..566777777777788***********.**************9.****************99999*****9*******************************96 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 7.4
                 EEEE-------.--BHHHHHH----S---HHHHHHHHHH- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  37 igyipqdpllfpeltvrenldmakeekktdkrieevlekv 76 
                 +  ++++                     + +++ e+ ++ 
  MMETSP1325-20131115|2335_1 908 LTQTYEH---------------------ALQEYHEHHDAA 926
                 2222222.....................222222222222 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.4e-05     0.021     222     285 ..     732     792 ..     642     812 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.4e-05
   PF13304.1 222 iflkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkel 285
                  + kk    + ++ +lS G+k+ l+++ a+ +++   ++ll+DE  + L+ k  +++   l++l
  MMETSP1325-20131115|2335_1 732 DIDKKPLRMKTNAMQLSGGQKQRLTIARAIVRNP---KILLLDEATAALDTKSEKEVQHALNSL 792
                 4455566667778899******************...************998777666665444 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.56   8.5e+02      27      44 ..     643     660 ..     630     664 .. 0.83
   2 !   19.1   0.0   3.5e-07   0.00054     118     213 ..     715     821 ..     707     826 .. 0.76

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.56
                 EEE--------HHHHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
  PF02463.14  27 taivGpNGSGKsnvldAi 44 
                 t +vGp G GK+  l  i
  MMETSP1325-20131115|2335_1 643 TGLVGPSGGGKTTALAVI 660
                 789********9877655 PP

  == domain 2    score: 19.1 bits;  conditional E-value: 3.5e-07
                 E-HHHHHHHHHCTT--TT.............G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHH..HH-BTBEEEEE-S-HHHHTT-SEEE--EE CS
                 xxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 118 vtkkevaellesagiske.............lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellk..eksknaQfivislreemlekadklvgvtk 213
                 +t +e+++ l++a +  +             +LSgG+k+     L +A   v+   + llDe  aaLD k  ++v + l+   ++++   i i++r +++ ++d++  v+ 
  MMETSP1325-20131115|2335_1 715 ATIAEIENALKMAALWHDidkkplrmktnamQLSGGQKQR----LTIARAIVRNPKILLLDEATAALDTKSEKEVQHALNslMAENKGTCIAIAHRLSTIMDSDQIAVVKD 821
                 55666777777766666666667777777779******84....55566677888899**********************4334455778889999999999888877765 PP

>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     2e-05      0.03      73     236 ..     344     508 ..     337     534 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2e-05
  PF00664.18  73 rkrlfrallrkilglfdsff...dknsvGellsrltnDvskirdglgdklglffqslatfvgglivmfylgwkltlvllailpllilvsavlakilkslqkkeqka.yakagavaeEalsgirtVkafggeekeleryekaleeakkagikkaitagllfgftqlisy 236
                 + + f+ ll+++  +  s +       v     +l+  v++i+d++++++  ++  l+ + ++l++ + +++ l++  l +l ++ + ++v++   +  q ++    y++      E+l++++ V+a+  +++ +e+y k+l  ++    k+  ++  l+++t +++ 
  MMETSP1325-20131115|2335_1 344 KEQCFHTLLQQEVAFTESESvigGSAGVEGMQELLDQAVDTISDFMTNSFPDLLNGLSELASALGMLLHFCPTLLFHFL-ALAIFRVETYVFMINVSHNQHRRHGRnYGP-RDRSGETLRNFKAVRAYSQQSAAEEQYSKHLL-FYAGRNKSPGLVHQLWIATDFFMQ 508
                 56677777777777777766767777777788899999*****************************************.999999999999655555555555541555.556679***********************998.555555555555555555554444 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.3   0.00015      0.22       3     115 ..     645     810 ..     643     819 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00015
                 EE-------HHHHHHHHHHCTHE.................EEEEECCSSSSS................................................T-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS CS
  PF00004.24   3 lyGppGtGKTllakavakelgve.................fleisgsellsk................................................yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkl 115
                 l+Gp G GKT++   + +  +ve                 fl ++ + + ++                                                ++  + +k r ++ +a   + p+il++DE+ a   ++      +e++v+ +L + + + k      ++i++++r +++
  MMETSP1325-20131115|2335_1 645 LVGPSGGGKTTALAVIQRFYDVEkgevlldgkplkdwkpsFLATQIAVVQQEsaifdltveenvrwgkpdatiaeienalkmaalwhdidkkplrmktnaMQLSGGQKQRLTIARAIVRN-PKILLLDEATAALDTK------SEKEVQHALNSLMAENKG-----TCIAIAHRLSTI 810
                 788888888876555554443333334444444444444433333333332245555555566666667777777777777777777777777777777777888899999999998888.*************999......899999999999999988.....677777776665 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00027      0.41      26      88 ..     740     789 ..     718     791 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00027
   PF13558.1  26 lsrrtgtlSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEAFsklDeeniasllell 88 
                 ++++  +lSGG+kq l+       +a ++ +      ++++++LDEA++ lD ++ +++  +l
  MMETSP1325-20131115|2335_1 740 MKTNAMQLSGGQKQRLT-------IARAIVR------NPKILLLDEATAALDTKSEKEVQHAL 789
                 56666777777774332.......2233333......599*************9988776655 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   0.00012      0.18       9     112 ..     645     794 ..     643     806 .. 0.65
   2 ?   -1.6   0.1       1.5   2.3e+03      52      87 ..     881     920 ..     861     935 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00012
   PF13401.1   9 vtGesGvGKTtllrrlarqldeeaeaae.........................karvv...fveapast.spkellqkllsalglpakg..................rltteellealqealrrrrtrlliiDEaqr.L...s.eealeelrslld 112
                 ++G+sG GKTt+l  + r +d e+                                 +   +ve +  + +p +   ++ +al+  a                     +++++l+  +++a+ r+ + +l++DEa   L   s +e+   l sl+ 
  MMETSP1325-20131115|2335_1 645 LVGPSGGGKTTALAVIQRFYDVEKGEVLldgkplkdwkpsflatqiavvqqesA---IfdlTVEENVRWgKPDATIAEIENALKMAALWhdidkkplrmktnamqlsGGQKQRLT--IARAIVRNPK-ILLLDEATAaLdtkSeKEVQHALNSLMA 794
                 68****************998765555599999999988888887777775331...2344555555555555556666666664444466666666665556664334444443..7777777777.*******997765425555555555555 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.5
   PF13401.1  52 kellqkllsalglpakg....rltteellealqealrrrr 87 
                 + +lq +  +l   a      r++ +el+++ ++al++ +
  MMETSP1325-20131115|2335_1 881 SVMLQSISDKLRAAAAHtnaeRRRLKELTQTYEHALQEYH 920
                 4446666666666555555567777777777777776655 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.031        47       6      21 ..     645     660 ..     643     670 .. 0.85
   2 ?    5.7   0.0    0.0044       6.6     245     326 ..     745     851 ..     723     853 .. 0.76
   3 ?    2.1   0.7     0.055        83     103     161 ..     875     930 ..     849     982 .. 0.59

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.031
   PF12846.2   6 ilGppGsGKSvllkkl 21 
                 ++Gp+G GK+++l  +
  MMETSP1325-20131115|2335_1 645 LVGPSGGGKTTALAVI 660
                 79*********99766 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0044
   PF12846.2 245 d....................kllviDEahrllgs...pegadfldelaregRkfgvgiilatQslsdlpps....ekakgilnnsttkiilrqdd.eelarlaellglt 326
                                      k+l++DEa  +l++   +e + +l++l+ e   +++ +i + + ls + +s     ++++ ++ ++t   l  ++ +e+a+l++l g++
  MMETSP1325-20131115|2335_1 745 MqlsggqkqrltiaraivrnpKILLLDEATAALDTkseKEVQHALNSLMAE---NKGTCIAIAHRLSTIMDSdqiaVVKDKQIKECGTHAELCSKPnGEYAELSKLSGMS 851
                 345555555666777777788************886567777888888887...999***************99998888889999888888888878888888887766 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.055
   PF12846.2 103 rnrpledeeeaalsralrelyeeegiatlaqrqayPtlgdllea.lreeeeelaeealar 161
                  +r++   ++++l+ + ++l +++++ t+a+r++ ++l++ +e+ l+e  e++ + + ++
  MMETSP1325-20131115|2335_1 875 LERDP---HSVMLQSISDKLRAAAAH-TNAERRRLKELTQTYEHaLQEYHEHHDAAKMQA 930
                 22222...223333333333333333.477799999999999997777774443333332 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.1   0.00035      0.53      24     186 ..     628     803 ..     609     807 .. 0.53
   2 ?   -3.0   0.1       2.4   3.6e+03      88     131 ..     889     933 ..     858     938 .. 0.58

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00035
   PF13481.1  24 wlvkg...llprgsltllaGapgtGKStlalqlaaava........tGepflgpvvp.epgrVlylsaEds..eaelrrrlsail.....aal.ddpenlllvslagv.gslrltaddrrdall..tadlerllaaieelegpdlvviDtlsrlvggdensnsdvgaviaalerlakrtgaavllv 186
                 ++ ++   l+p g+ t l+G++g GK+t ++ +   +         +G+p+ +++++  +  + +++ E +    +++++++        a++ +  ++  l++     ++ +l+ +++  +l   + +  ++++ai + + p+++ +D ++++++   +s++   +v  al+ l  +++ + + +
  MMETSP1325-20131115|2335_1 628 PIFENfnlLVPGGTKTGLVGPSGGGKTTALAVIQRFYDvekgevllDGKPLKDWKPSfLATQIAVVQQESAifDLTVEENVRWGKpdatiAEIeNALKMAALWH---DiDKKPLRMKTNAMQLSggQKQRLTIARAIVR-N-PKILLLDEATAALD--TKSEK---EVQHALNSLMAENKGTCIAI 803
                 55554344789999**************9988776666776666666666655322245566666666666543345555553333332222222223333332...11222333333222222223444456666666.3.77777776666665..33333...33444444444444444444 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 2.4
   PF13481.1  88 rrlsailaalddpenlllvsl.agv.gslrltaddrrdalltadle 131
                 ++l+a++a+  + e+ +l  l +++ + l+ +++ +++a+++a++e
  MMETSP1325-20131115|2335_1 889 DKLRAAAAHT-NAERRRLKELtQTYeHALQEYHEHHDAAKMQAAVE 933
                 5566555554.33333333331344555555555555444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1015 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       921  (0.067364); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.69u 0.39s 00:00:02.08 Elapsed: 00:00:00.81
# Mc/sec: 3002.84
//
Query:       MMETSP1325-20131115|2340_1  [L=607]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-61  206.5   0.0    5.3e-61  205.9   0.0    1.3  1  PF00069.20 Protein kinase domain
    2.3e-25   89.1   0.0    3.2e-25   88.6   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
    7.1e-05   21.8   0.0    0.00014   20.8   0.0    1.4  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0047   16.4   0.0      0.011   15.3   0.0    1.5  1  PF12581.3  Protein of unknown function (DUF3756)
  ------ inclusion threshold ------
      0.048   13.2   1.3       0.41   10.2   0.1    2.7  2  PF01636.18 Phosphotransferase enzyme family
       0.22   11.7   2.7       0.29   11.3   0.1    2.2  2  PF06156.8  Protein of unknown function (DUF972)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.9   0.0   2.3e-64   5.3e-61       1     260 []      26     297 ..      26     297 .. 0.95

  Alignments for each domain:
  == domain 1    score: 205.9 bits;  conditional E-value: 2.3e-64
                 EEEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEE..........STEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH.....HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   1 yelleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfee..........kdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks.....eelkdlikkllekdpakRltaeeilkhpwl 260
                 y+l+ +lG+G f++V  a++ +tgk+vA+Ki++ + +  ++++   rEl  +++++H+n+++l ++ ++          ++ l+l le+++gg+lfd++ + g + e  ++ +++q++ +l+ +H+ g++HrD+KpeNiLl+++ +lk+ DFGla   + ++e l+t +gtr Y APE+l ++ +++ k+DvWs+Gv+l+ +l g++pf+++  ++    ++ i  +++++ +  +++ +     +e++++++++++   ++R t++e+l+h+w+
  MMETSP1325-20131115|2340_1  26 YRLGPTLGQGHFATVKLAQRLSTGKTVALKIIELNAAAPRQQEMIYRELTAMQQVQHENVLQLERTAMSvpfprengdpREVLLLELELAPGGELFDYILTGGAFPEPVARAYFKQLMLALAECHRVGVYHRDIKPENILLNESFQLKVGDFGLASL-NPNNELLRTTCGTRSYQAPEILARQMYQGDKADVWSAGVVLFIMLAGNPPFKTA--ARGDWWFNAISLNRYDQFWLAHQRPPaptvyKEAQEFLNSIFTVSGDERKTVAELLNHRWI 297
                 677889**************************************************************9*********8889999**********************************************************************97.****************************************************99..7888888888887777776666554488999*****************************7 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.6   0.0   1.4e-28   3.2e-25       3     255 ..      28     291 ..      26     294 .. 0.78

  Alignments for each domain:
  == domain 1    score: 88.6 bits;  conditional E-value: 1.4e-28
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEE.CTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBE.......SSSS.....EEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEE.HHHHHHH---HHHHHHTTT-GT..........TTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl.kesaeeeekeefleeakimkklkhpnivkllgvct.......keep.....llivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkft.sksDvWsfGvllwEiftlgesp..........ypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeRptfkel 255
                 lg +lG+G+f++V  ++      ++  +Va+K++  + a+ +++e++++e+ +m++++h+n+++l    +       +        ll+ +e+++gG+L +++ +    ++       +  q+  +++  ++  + Hrd+   N+Ll+e+ + k++DfGLa+   +++  ++   +     + apE+l ++ ++  k+DvWs Gv+l+ ++  g+ p          ++ +s ++  ++  +++r ++p+ + +e +e++++ ++ + +eR t +el
  MMETSP1325-20131115|2340_1  28 LGPTLGQGHFATVKLAQRL----STGKTVALKIIeLNAAAPRQQEMIYRELTAMQQVQHENVLQLERTAMsvpfpreN--GdprevLLLELELAPGGELFDYILTG--GAFPEPVARAYFKQLMLALAECHRVGVYHRDIKPENILLNESFQLKVGDFGLASLNPNNELLRT---TCGTRSYQAPEILARQMYQgDKADVWSAGVVLFIMLA-GNPPfktaargdwwFNAISLNRYDQFWLAHQRPPAPT-VYKEAQEFLNSIFTVSGDERKTVAEL 291
                 5679************999....8999*******445666677888899****************9888877886543..14588788889*************97..9999999999********************************************9955444443...44556899******99987479***********7776.8899555555555444444444444445555555554.56666677777777766666666665 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   6.2e-08   0.00014      57     164 ..      69     176 ..      47     187 .. 0.84

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 6.2e-08
   PF06293.9  57 rsvrEfrllkrLreagvpvpkpvaaaa..qkvgle.yqAdllteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliD 164
                  ++rE+ ++++ + + v  +   a+ +   ++++  +  +ll  +l++  +L +++ ++  ++e + ra ++++  + a+ hr+gv+H+d+ + nill+e     ++ + D
  MMETSP1325-20131115|2340_1  69 MIYRELTAMQQVQHENVLQLERTAMSVpfPRENGDpREVLLLELELAPGGELFDYILTGGAFPEPVARAYFKQLMLALAECHRVGVYHRDIKPENILLNESF---QLKVGD 176
                 567888888888888888887766665225888887788888889************9999*************************************9997...555555 PP

>> PF12581.3  Protein of unknown function (DUF3756)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.7e-06     0.011      17      37 ..     555     575 ..     550     577 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 4.7e-06
   PF12581.3  17 isiGayaaEWALSTEpPPaGY 37 
                  s G+ +aE ALST + PaG+
  MMETSP1325-20131115|2340_1 555 ASMGCEGAEEALSTMAQPAGF 575
                 699*****************8 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   0.00018      0.41     146     199 ..     132     184 ..      59     218 .. 0.56
   2 ?   -0.4   0.1       0.3   6.7e+02     133     150 ..     349     365 ..     255     383 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00018
                 HHHHHHHHHHHHHHHHC...SS--EEB-SS-SGGGEEEETTTTEEEE---TT-BBE- CS
  PF01636.18 146 eeleervlaalaallpg...aeppvllHgDlhpgNllvdpddgrvgviDfedaglgp 199
                 e +++   a +++l+++     + ++ H+D++p N+l++ +  ++ v Df++a+l p
  MMETSP1325-20131115|2340_1 132 EPVAR---AYFKQLMLAlaeCHRVGVYHRDIKPENILLN-ESFQLKVGDFGLASLNP 184
                 23333...2223333324435678899************.66666699999999874 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.3
                 HHHHHHHCTHHHHHHHHH CS
  PF01636.18 133 taalvasellelleelee 150
                 +a++++ ++++ ++++ +
  MMETSP1325-20131115|2340_1 349 RARRRQQQQQQ-QQQAQA 365
                 11222222222.222222 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2      0.69   1.6e+03      20      60 ..      42      82 ..      37      95 .. 0.73
   2 ?   11.3   0.1   0.00013      0.29      24      66 ..     326     368 ..     321     381 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.69
   PF06156.8 20 lleeleelkkelkelleenaelkleneklrerleeleeeek 60
                l + l++ k+   +++e na+   + e ++++l+ +++ ++
  MMETSP1325-20131115|2340_1 42 LAQRLSTGKTVALKIIELNAAAPRQQEMIYRELTAMQQVQH 82
                56667777888888999999999999999999888877322 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00013
   PF06156.8  24 leelkkelkelleenaelkleneklrerleeleeeekkkekkk 66 
                 l+e  +  k++++en++++ e ++ r+r ++++++++++ +++
  MMETSP1325-20131115|2340_1 326 LAEFMSARKAVIDENNRIQREQTRARRRQQQQQQQQQAQAQAA 368
                 5667777899*****************9888877544444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1016  (0.0743125); expected 273.4 (0.02)
Passed bias filter:                      533  (0.0389848); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.14u 0.41s 00:00:01.54 Elapsed: 00:00:00.74
# Mc/sec: 1965.66
//
Query:       MMETSP1325-20131115|2345_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 273.18
//
Query:       MMETSP1325-20131115|2346_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 357.10
//
Query:       MMETSP1325-20131115|2347_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 252.25
//
Query:       MMETSP1325-20131115|2348_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 611.93
//
Query:       MMETSP1325-20131115|2350_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0061   16.7   9.7      0.009   16.1   6.7    1.3  1  PF10659.4 Trypanosome variant surface glycoprotein C-terminal domain
  ------ inclusion threshold ------
      0.011   15.7  12.8      0.011   15.7   8.9    2.7  2  PF07974.8 EGF-like domain


Domain annotation for each model (and alignments):
>> PF10659.4  Trypanosome variant surface glycoprotein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   6.7   1.3e-06     0.009       4      79 ..      44     118 ..      38     136 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.3e-06
                 T.--HHHHH.STTEEE--S-----EEE-GGGSS--XXXXXXXXXXXSSXTTT.XXXXXXSX.XTSEEXXXXEEXXXX CS
   PF10659.4   4 kkkkkeeCk.ekgCkydkkeeekkCklkeekkekkekeaqetateekttekckkkkdkkdckkeckWegneckdsSi 79 
                 ++++ + C+  ++C y++   e +C +k + ++  +k+  e   + +++ +c+   ++ +c  ++ Weg++ckd S 
  MMETSP1325-20131115|2350_1  44 TNSSCKYCEgGNQCVYKGAGGEATCAPKGNGQKWFKKTCCEF--DCHDHGRCETGAHQVKCVCDFWWEGDTCKDLSK 118
                 34555566677******9999999****99999988775444..5789999*999999999999*********9773 PP

>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   5.0         2   1.4e+04       1      15 [.      48      58 ..      37      75 .. 0.76
   2 ?   15.7   8.9   1.6e-06     0.011       7      32 .]      86     113 ..      77     113 .. 0.92

  Alignments for each domain:
  == domain 1    score: -5.8 bits;  conditional E-value: 2
   PF07974.8  1 CsadgliCgghGtCv 15
                C+     C g+ +Cv
  MMETSP1325-20131115|2350_1 48 CK----YCEGGNQCV 58
                43....277777776 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 1.6e-06
   PF07974.8   7 iCgghGtCvkq..cgkCvCdsgyqGktC 32 
                 +C+ hG C++   + kCvCd+ + G+tC
  MMETSP1325-20131115|2350_1  86 DCHDHGRCETGahQVKCVCDFWWEGDTC 113
                 4********88**9************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       750  (0.0548566); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.77
# Mc/sec: 569.52
//
Query:       MMETSP1325-20131115|2351_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-05   22.9   0.0      8e-05   22.7   0.0    1.1  1  PF08059.8 SEP domain


Domain annotation for each model (and alignments):
>> PF08059.8  SEP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   5.9e-09     8e-05      25      75 .]       2      48 ..       1      48 [. 0.93

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 5.9e-09
   PF08059.8 25 efLesikkgevPsellkkdpkqevdvkvedkreedyvkpkkkykpFsGsGq 75
                +f+++i +g +P+e+++ +p ++v +  +d+r+e + ++   +++F+G+G+
  MMETSP1325-20131115|2351_1  2 SFIRDITDGYFPAEFKNEYP-DGVLLVSHDRRSEPFGED---FEAFKGEGN 48
                699****************9.88888899********86...9******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|2352_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.036   13.7   0.0        2.6    7.8   0.0    2.2  2  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00019       2.6      65      90 ..       2      27 ..       1      28 [. 0.94
   2 ?    4.2   0.0    0.0025        34       6      18 ..      83      95 ..      78      96 .] 0.85

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00019
                EEEEEEEEEEEEEEHHHHHHHHCC-H CS
  PF00027.24 65 tvvaltdvevlvipredfrelleknp 90
                +++alt+++vl +   d++e+ +++p
  MMETSP1325-20131115|2352_1  2 SITALTKSVVLGLRNRDLLEITKDYP 27
                79********************9998 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0025
                ---EEE-TT-B-- CS
  PF00027.24  6 kgevifkeGdpad 18
                  ++if+eGd+ad
  MMETSP1325-20131115|2352_1 83 SKQTIFSEGDEAD 95
                679********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|2344_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-09   38.0   0.6    5.4e-09   35.9   0.4    1.9  1  PF00031.16 Cystatin domain


Domain annotation for each model (and alignments):
>> PF00031.16  Cystatin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.4   3.9e-13   5.4e-09       1      60 [.      21      85 ..      21     103 .. 0.86

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 3.9e-13
                ---EEECTTSHHHHHHHHHHHHHHHHHTSSTB-E.....EESEEEEEEEE-----EEEEEEEEEE CS
  PF00031.16  1 GglspvddndpevqealdfalakyNakskdnyyf.....klvevveaksQvvagvnyyikvevge 60
                G +s +d+nd++vqea++ a+  y  +     +      k ++vv+a++Qvv+gv+y ++v+++e
  MMETSP1325-20131115|2344_1 21 GAPSAIDVNDSRVQEAAELAVDRYDREGGRLASRkclggKCFKVVSATKQVVSGVKYVLDVQIQE 85
                7899**********************9844444422344679*********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 554.45
//
Query:       MMETSP1325-20131115|2353_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 415.97
//
Query:       MMETSP1325-20131115|2355_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.057   13.4   0.6      0.076   13.0   0.4    1.2  1  PF01826.12 Trypsin Inhibitor like cysteine rich domain
      0.064   12.7   0.3      0.086   12.3   0.2    1.2  1  PF08277.7  PAN-like domain


Domain annotation for each model (and alignments):
>> PF01826.12  Trypsin Inhibitor like cysteine rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.4   1.1e-05     0.076       3      25 ..      27      49 ..      26      58 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.1e-05
  PF01826.12  3 aneeyseCgsaCektCdnlekpe 25
                +++e+++C+s+C   C++++  e
  MMETSP1325-20131115|2355_1 27 PGKEFEQCMSKCVYYCQKPKGAE 49
                789**************998765 PP

>> PF08277.7  PAN-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   1.3e-05     0.086       1      30 [.      11      39 ..      11      42 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.3e-05
   PF08277.7  1 MvlvwGepedssstsstkslswedCvskCl 30
                M ++ G+  +s  + ++  +++e+C+skC 
  MMETSP1325-20131115|2355_1 11 MAVMGGSLAGS-VEAKEPGKEFEQCMSKCV 39
                88999*****8.9999*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|2357_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 309.35
//
Query:       MMETSP1325-20131115|2360_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        64  (0.0046811); expected 273.4 (0.02)
Passed bias filter:                       48  (0.00351083); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.56
# Mc/sec: 168.17
//
Query:       MMETSP1325-20131115|2359_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       806  (0.0589526); expected 273.4 (0.02)
Passed bias filter:                      534  (0.0390579); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.45s 00:00:01.07 Elapsed: 00:00:00.53
# Mc/sec: 1193.66
//
Query:       MMETSP1325-20131115|2354_1  [L=453]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-24   85.5  28.2    2.8e-07   30.8   0.8    5.6  5  PF08238.7  Sel1 repeat
    0.00057   19.5   4.7    0.00057   19.5   3.3    2.2  2  PF06698.6  Protein of unknown function (DUF1192)
     0.0071   16.1  12.2      0.072   12.9   0.1    4.2  4  PF13424.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.029   14.9   0.5      0.029   14.9   0.3    6.1  7  PF13432.1  Tetratricopeptide repeat
      0.046   13.6  10.2      0.086   12.7   0.1    2.7  2  PF09304.5  Cortexillin I, coiled coil
        0.2   11.4  15.4       0.17   11.7   4.0    2.5  2  PF14282.1  FlxA-like protein
       0.29   10.6   8.9       0.16   11.5   0.5    3.7  3  PF13414.1  TPR repeat
       0.37   10.7  20.1       0.33   10.8   0.2    4.6  5  PF07719.12 Tetratricopeptide repeat
       0.58    9.9  16.1        2.6    7.9  11.0    2.0  2  PF13863.1  Domain of unknown function (DUF4200)
        1.8    8.4  10.9        1.1    9.0   0.1    4.2  3  PF13176.1  Tetratricopeptide repeat
        2.1    8.1   6.5        3.4    7.5   0.4    2.7  2  PF13838.1  Clathrin-H-link


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   5.3   2.5e-10   3.1e-07       1      39 []      44      84 ..      44      84 .. 0.89
   2 !    9.3   0.0    0.0013       1.6       3      30 ..      87     111 ..      86     113 .. 0.80
   3 !   24.1   0.2   2.9e-08   3.5e-05       3      38 ..     125     157 ..     124     158 .. 0.89
   4 !   30.8   0.8   2.3e-10   2.8e-07       3      37 ..     161     192 ..     160     194 .. 0.87
   5 ?    2.2   0.0      0.22   2.7e+02       3      26 ..     204     223 ..     203     230 .. 0.76

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 2.5e-10
   PF08238.7  1 aeAqynLGlyymylnGl....gGvpkdpekAleWyekAAeqGh 39
                a Aqy+L+ +y   +G+    gG p d+++A++Wy+ AAeqGh
  MMETSP1325-20131115|2354_1 44 AAAQYALAEDY--CRGDwfglGGKPEDYAQARKWYQAAAEQGH 84
                68******555..7999999888888****************9 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0013
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAleW 30 
                 A ++L+  +m ++G+gG + d+++A+e+
  MMETSP1325-20131115|2354_1  87 ARFELA--QMCYDGEGG-DTDHKQAREL 111
                 789***..7777**955.559****986 PP

  == domain 3    score: 24.1 bits;  conditional E-value: 2.9e-08
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAleWyekAAeqG 38 
                 A y LG  +m l+G+ G ++++ekA+  +e+AAe++
  MMETSP1325-20131115|2354_1 125 ALYTLG--MMCLRGE-GGEQNHEKARGCFERAAELD 157
                 99****..6669**9.7899**************97 PP

  == domain 4    score: 30.8 bits;  conditional E-value: 2.3e-10
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAleWyekAAeq 37 
                 A ++LG+++  ++G+ G ++++ekA++W+e+AA++
  MMETSP1325-20131115|2354_1 161 ASFELGMMW--YTGE-GGEQNHEKARQWFERAADL 192
                 779***555..8**9.7899*************96 PP

  == domain 5    score: 2.2 bits;  conditional E-value: 0.22
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpek 26 
                 A  +L+  +m ++G+ G ++d ++
  MMETSP1325-20131115|2354_1 204 ALAALA--RMDEDGR-GNEQD-SR 223
                 677899..4448**9.89995.44 PP

>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.3       7.5   9.4e+03      35      51 ..     282     298 ..     281     299 .. 0.69
   2 !   19.5   3.3   4.6e-07   0.00057       7      49 ..     339     380 ..     330     383 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 7.5
   PF06698.6  35 aEIaRleaalakkkasr 51 
                 +E++R  +a ++++++r
  MMETSP1325-20131115|2354_1 282 QEMKRQLEAYKAAETQR 298
                 67777777777777776 PP

  == domain 2    score: 19.5 bits;  conditional E-value: 4.6e-07
   PF06698.6   7 kktakheigqDLslLSveELeeRIalLqaEIaRleaalakkka 49 
                 +  + +e++q   +LS+ E+++RI++L+aE + leaa ++kk 
  MMETSP1325-20131115|2354_1 339 RAAE-AEASQKRRTLSQGEIAARIKQLKAELKQLEAAXERKKR 380
                 3333.677888889**************************985 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1      0.12   1.4e+02      20      33 ..      68      81 ..      65      95 .. 0.74
   2 !    7.0   0.0    0.0041       5.1      30      76 ..     107     157 ..     101     160 .. 0.71
   3 !   12.9   0.1   5.8e-05     0.072      18      49 ..     176     208 ..     174     213 .. 0.85
   4 ?   -2.0   0.4       2.5   3.1e+03      28      67 ..     337     376 ..     331     380 .. 0.69

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.12
   PF13424.1 20 dydeAlelyekale 33
                dy +A+++y+ a e
  MMETSP1325-20131115|2354_1 68 DYAQARKWYQAAAE 81
                67777777776655 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0041
   PF13424.1  30 kalel.lrelgddhpdtaralnnlanlylalg....dydeAleylekAleia 76 
                 +a el   +++d++    +al+ l+  +l+ +    ++++A+ ++e+A e++
  MMETSP1325-20131115|2354_1 107 QARELvEGLAKDED-CHMWALYTLGMMCLRGEggeqNHEKARGCFERAAELD 157
                 56666444455555.3378888888888886667778999999999999886 PP

  == domain 3    score: 12.9 bits;  conditional E-value: 5.8e-05
   PF13424.1  18 lgdydeAlelyekalel.lrelgddhpdtaral 49 
                 ++++++A++++e+a +l ++++g  h   + al
  MMETSP1325-20131115|2354_1 176 EQNHEKARQWFERAADLrYKVTGQGHEGALAAL 208
                 589*******************99998755555 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 2.5
   PF13424.1  28 yekalellrelgddhpdtaralnnlanlylalgdydeAle 67 
                  ++a e  ++++++ +    +   + +l+++l+++++A e
  MMETSP1325-20131115|2354_1 337 WKRAAEAEASQKRRTLSQGEIAARIKQLKAELKQLEAAXE 376
                 5667777667777777777777777777777777777765 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   1.7       3.8   4.7e+03      22      39 ..      35      52 ..      16      52 .. 0.81
   2 ?    4.8   2.2     0.034        42      12      44 ..      68      98 ..      67     118 .. 0.79
   3 ?    2.0   0.0      0.26   3.3e+02      12      43 ..     104     135 ..     101     140 .. 0.88
   4 ?   14.9   0.3   2.3e-05     0.029      11      60 ..     141     192 ..     135     194 .. 0.94
   5 ?   -2.7   0.4       7.4   9.2e+03      37      42 ..     208     213 ..     199     244 .. 0.52
   6 ?   -1.9   0.1       4.4   5.4e+03      17      47 ..     232     268 ..     221     282 .. 0.58
   7 ?    3.1   1.3      0.12   1.5e+02      20      59 ..     337     376 ..     331     380 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 3.8
   PF13432.1 22 aalalaPeaaeallllae 39
                +a a+aP +a a+++lae
  MMETSP1325-20131115|2354_1 35 TAEAAAPTDAAAQYALAE 52
                577788889999999986 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.034
   PF13432.1 12 dydeAlaaleaalalaPeaaeallllaeallrl 44
                dy++A++ ++aa ++   +  a+++la+++++ 
  MMETSP1325-20131115|2354_1 68 DYAQARKWYQAAAEQG--HHGARFELAQMCYDG 98
                8999999999999999..999999999999965 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.26
   PF13432.1  12 dydeAlaaleaalalaPeaaeallllaeallr 43 
                 d ++A+++ e + +++  + +al+ l++++lr
  MMETSP1325-20131115|2354_1 104 DHKQARELVEGLAKDEDCHMWALYTLGMMCLR 135
                 6789999999999999889*********9997 PP

  == domain 4    score: 14.9 bits;  conditional E-value: 2.3e-05
   PF13432.1  11 GdydeAlaaleaalalaPeaaeallllaeallrl....grldeAaallraalal 60 
                 ++ ++A+ ++e+a +l+  +  a+++l+++ +       ++++A++++++a++l
  MMETSP1325-20131115|2354_1 141 QNHEKARGCFERAAELD--DEAASFELGMMWYTGeggeQNHEKARQWFERAADL 192
                 799**************..99***********999****************976 PP

  == domain 5    score: -2.7 bits;  conditional E-value: 7.4
   PF13432.1  37 laeall 42 
                 la++  
  MMETSP1325-20131115|2354_1 208 LARMDE 213
                 333333 PP

  == domain 6    score: -1.9 bits;  conditional E-value: 4.4
   PF13432.1  17 laaleaalala.....Peaaeallllaeall.rlgrl 47 
                 +a   aa a+      P+  + + +++ ++   ++ +
  MMETSP1325-20131115|2354_1 232 AATTTAASAESnalrtPDGKQSRSARGASASvGQSSV 268
                 3333333333356667777777777777777444444 PP

  == domain 7    score: 3.1 bits;  conditional E-value: 0.12
   PF13432.1  20 leaalalaPeaaeallllaeallrlgrldeAaallraala 59 
                 +++a +++    +  l  +e+++r ++l+++++ l+aa +
  MMETSP1325-20131115|2354_1 337 WKRAAEAEASQKRRTLSQGEIAARIKQLKAELKQLEAAXE 376
                 566666666667788999**************99999864 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   6.9e-05     0.086      41     103 ..     255     317 ..     231     321 .. 0.86
   2 ?    2.7   3.8     0.094   1.2e+02      18      59 ..     340     380 ..     322     385 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 6.9e-05
   PF09304.5  41 eLksllasleaqkaerekrlrelqakidellknlekeklakleLesrlskaekDkaileLkLa 103
                   +   as+ + + + e+++ +l ak +e++++le  k a  +   +++++  +   +e++L+
  MMETSP1325-20131115|2354_1 255 SARGASASVGQSSVSAEQQVIDLTAKNQEMKRQLEAYKAAETQRSPKKARVATNDGDPEVRLL 317
                 55666788899999**************************98888899999888889999987 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.094
   PF09304.5  18 LagLersledekvsqeeLakqkdeLksllasleaqkaerekr 59 
                  a  e s     +sq+e+a + ++Lk+ l+ lea  +  +kr
  MMETSP1325-20131115|2354_1 340 AAEAEASQKRRTLSQGEIAARIKQLKAELKQLEAAXER-KKR 380
                 44555666666788888888888888888888876544.333 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   1.4     0.022        27       6      45 ..     259     297 ..     253     307 .. 0.71
   2 ?   11.7   4.0   0.00013      0.17      18      79 ..     320     380 ..     315     385 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.022
   PF14282.1   6 sstsssassgssdsqiksLqkqiqsltkqlkelssdeelt 45 
                 +s+s  +ss s ++q+  L+ + q+++ ql+  +  e+  
  MMETSP1325-20131115|2354_1 259 ASASVGQSSVSAEQQVIDLTAKNQEMKRQLEAYKAAET-Q 297
                 44445555567799****************99888433.3 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00013
   PF14282.1  18 dsqiksLqkqiqsltkqlkelssdeeltaeekqkqqqliqqQIqalqaQiaqlqsqqseeaq 79 
                 ++ ++ ++kq  +l+++ k  ++ +e++++++   q +i + I++l+a+++ql++  + +++
  MMETSP1325-20131115|2354_1 320 AQVTEMMEKQKRKLEEEWKRAAE-AEASQKRRTLSQGEIAARIKQLKAELKQLEAAXERKKR 380
                 57788999**************9.999**************************998877765 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   1.0       1.6     2e+03      18      31 ..      68      81 ..      42      93 .. 0.75
   2 ?   11.5   0.5   0.00013      0.16       5      46 ..     125     168 ..     123     193 .. 0.69
   3 ?    3.5   0.1      0.04        50       7      33 ..     163     193 ..     159     214 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.6
   PF13414.1 18 dydeAieayekAle 31
                dy++A + y+ A e
  MMETSP1325-20131115|2354_1 68 DYAQARKWYQAAAE 81
                67777777776655 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00013
   PF13414.1   5 alkelGnalfk....egdydeAieayekAleldpnnaelyynlAla 46 
                 al+ lG+++++    e+++++A  ++e+A eld + a+  + l+  
  MMETSP1325-20131115|2354_1 125 ALYTLGMMCLRgeggEQNHEKARGCFERAAELDDEAAS--FELGMM 168
                 68899999999888899****************86554..444444 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.04
   PF13414.1   7 kelGnalfk....egdydeAieayekAleld 33 
                 +elG++ ++    e+++++A + +e+A +l+
  MMETSP1325-20131115|2354_1 163 FELGMMWYTgeggEQNHEKARQWFERAADLR 193
                 5677777776666889***********9886 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       5.9   7.3e+03       2      12 ..      45      55 ..      44      58 .. 0.66
   2 ?    5.4   0.8     0.015        18      16      29 ..      68      81 ..      67      83 .. 0.91
   3 ?   -3.3   0.1         9   1.1e+04       3      12 ..     125     134 ..     125     135 .. 0.81
   4 ?   10.8   0.2   0.00027      0.33      15      32 ..     141     158 ..     139     160 .. 0.90
   5 ?    7.1   0.2     0.004         5      15      30 ..     177     192 ..     175     195 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 5.9
                HHHHHHHHHHH CS
  PF07719.12  2 ealynlGlayy 12
                 a y+l++ y 
  MMETSP1325-20131115|2354_1 45 AAQYALAEDYC 55
                56777777665 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.015
                -HHHHHHHHHHHHH CS
  PF07719.12 16 dyeeAleafekAle 29
                dy++A+++++ A e
  MMETSP1325-20131115|2354_1 68 DYAQARKWYQAAAE 81
                9***********87 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 9
                 HHHHHHHHHH CS
  PF07719.12   3 alynlGlayy 12 
                 aly lG+ ++
  MMETSP1325-20131115|2354_1 125 ALYTLGMMCL 134
                 7999*99876 PP

  == domain 4    score: 10.8 bits;  conditional E-value: 0.00027
                 T-HHHHHHHHHHHHHH-T CS
  PF07719.12  15 gdyeeAleafekAleldP 32 
                 +++e+A+ +fe+A eld 
  MMETSP1325-20131115|2354_1 141 QNHEKARGCFERAAELDD 158
                 799*************96 PP

  == domain 5    score: 7.1 bits;  conditional E-value: 0.004
                 T-HHHHHHHHHHHHHH CS
  PF07719.12  15 gdyeeAleafekAlel 30 
                 +++e+A+++fe+A  l
  MMETSP1325-20131115|2354_1 177 QNHEKARQWFERAADL 192
                 799**********987 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.5      0.34   4.3e+02      87     108 ..     271     292 ..     251     297 .. 0.69
   2 ?    7.9  11.0    0.0021       2.6      13     117 ..     281     388 ..     272     398 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.34
   PF13863.1  87 kaqleelkaeiekleekleeyq 108
                 ++q+ +l+a++++++++le y+
  MMETSP1325-20131115|2354_1 271 EQQVIDLTAKNQEMKRQLEAYK 292
                 4555566666666666666654 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0021
   PF13863.1  13 qlaldakreeierkeeelkereeelekkqeelqesli...kfnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekleekleeyqkYeefLekv 117
                 +++++++ e ++  e + + ++++++  +   + +l    ++ +++++ + k e+  k+a+e++ ++k ++    ++ a +++lkae ++le+  e+ ++ ++fL  +
  MMETSP1325-20131115|2354_1 281 NQEMKRQLEAYKAAETQRSPKKARVATNDGDPEVRLLtpaQVTEMMEKQKRKLEEEWKRAAEAEASQKRRTLSQGEIAARIKQLKAELKQLEAAXERKKRWQKFLLLL 388
                 5677777788888888888888888887777777775555999**************************************************************765 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.39   4.9e+02      14      28 ..      68      80 ..      65     100 .. 0.85
   2 ?    9.0   0.1   0.00092       1.1       1      30 [.     125     158 ..     125     162 .. 0.80
   3 ?    3.3   0.1     0.063        78      13      31 ..     177     195 ..     170     215 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.39
   PF13176.1 14 dyekAielyeraLal 28
                dy +A + y++  a 
  MMETSP1325-20131115|2354_1 68 DYAQARKWYQA--AA 80
                9*********9..43 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00092
   PF13176.1   1 allnLarlysr....lgdyekAielyeraLaltk 30 
                 al+ L+ ++ r     +++ekA  ++era +l++
  MMETSP1325-20131115|2354_1 125 ALYTLGMMCLRgeggEQNHEKARGCFERAAELDD 158
                 57778888888888899***********666665 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.063
   PF13176.1  13 gdyekAielyeraLaltkd 31 
                 +++ekA + +era  l++ 
  MMETSP1325-20131115|2354_1 177 QNHEKARQWFERAADLRYK 195
                 89**********8877765 PP

>> PF13838.1  Clathrin-H-link
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.4    0.0027       3.4      23      41 ..     231     249 ..     224     250 .. 0.83
   2 ?    2.7   0.5     0.085   1.1e+02      20      55 ..     335     370 ..     329     373 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0027
   PF13838.1  23 eeAAkvAansprgiLRtpe 41 
                 ++A   Aa++ +++LRtp+
  MMETSP1325-20131115|2354_1 231 AAATTTAASAESNALRTPD 249
                 457789***********96 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.085
   PF13838.1  20 gqyeeAAkvAansprgiLRtpetiqrFkqvpaqpgq 55 
                 ++++ AA+  a+ +r+ L   e+ +r kq++a+ +q
  MMETSP1325-20131115|2354_1 335 EEWKRAAEAEASQKRRTLSQGEIAARIKQLKAELKQ 370
                 789**************************9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1315  (0.096182); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.93u 0.37s 00:00:01.30 Elapsed: 00:00:00.55
# Mc/sec: 1973.73
//
Query:       MMETSP1325-20131115|2363_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-10   40.1   0.0    2.4e-10   40.1   0.0    1.1  1  PF00454.22 Phosphatidylinositol 3- and 4-kinase


Domain annotation for each model (and alignments):
>> PF00454.22  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.0   1.8e-14   2.4e-10     141     222 ..       2      82 ..       1     110 [. 0.78

  Alignments for each domain:
  == domain 1    score: 40.1 bits;  conditional E-value: 1.8e-14
                 --CCCEEE.E----EEE--------.----SS.SS--SS---HHHHHH-------SHHHHHHHHHHHHHHHHHHCTHHHHHHHH CS
  PF00454.22 141 RhldNilvdkktgklvhIDfGlclp.skheek.pelvpfrltrpfseemreyldpskdeglfresceeilealrrdqdlltrlL 222
                 Rh+ Ni++ +k+g++ hIDfG++l+ s+ ++  +e  pf+ltr++ +++ +  + s     f+e   + + al+++   lt+l+
  MMETSP1325-20131115|2363_1   2 RHNANIML-DKDGHILHIDFGYMLGqSPGGNVgWENAPFKLTREYIDLLDG--KGSPAWRDFEERFRDGFIALKKHEARLTALF 82 
                 9*******.****************97776645**********99999966..4444444455555555556666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 660.33
//
Query:       MMETSP1325-20131115|2364_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.5   0.4       0.18   11.8   0.3    1.4  1  PF06129.7 Chordopoxvirus G3 protein


Domain annotation for each model (and alignments):
>> PF06129.7  Chordopoxvirus G3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   1.3e-05      0.18      13      53 ..       5      45 ..       3      59 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.3e-05
   PF06129.7 13 lllaYflnyypTNKlqlavkelneenaikkqadeelpavle 53
                l++ Y++ +y+  K+q  +k+l++ + +kkq   +  +v++
  MMETSP1325-20131115|2364_1  5 LIMKYMVAMYRNDKIQSMLKNLERVAGVKKQDSMASVEVVD 45
                7899*********************9999998766655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       712  (0.0520772); expected 273.4 (0.02)
Passed bias filter:                      620  (0.0453482); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|2366_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   12.0   0.0       0.14   12.0   0.0    1.1  1  PF00903.20 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


Domain annotation for each model (and alignments):
>> PF00903.20  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     1e-05      0.14      71      97 ..      18      45 ..       2      53 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1e-05
                E.CSEEEEEEEECEHHHHHHHHHHHHH- CS
  PF00903.20 71 e.etvhhvafialdvedvgkaldrlkea 97
                e +++++v+++al + d+ ++++++++ 
  MMETSP1325-20131115|2366_1 18 EqNEGEGVQHMALLTGDIFETIRKIRSM 45
                32489********************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 252.71
//
Query:       MMETSP1325-20131115|2367_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.2   0.6      0.038   13.9   0.1    1.8  2  PF00622.23 SPRY domain


Domain annotation for each model (and alignments):
>> PF00622.23  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       0.1   1.4e+03      27      44 ..      76     114 ..      36     146 .. 0.54
   2 ?   13.9   0.1   2.8e-06     0.038       2      26 ..     148     170 ..     147     178 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.1
                 S......................--------STT-.---- CS
  PF00622.23  27 a......................krkgeenllgedegswg 44 
                 a                       r  + ++ ge  gsw 
  MMETSP1325-20131115|2367_1  76 AakkakkaveaaskaamlpvdleGRMKGLRWGGEA-GSWL 114
                 14444444444444444444444444445555555.5554 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 2.8e-06
                 --EEEEEE-TT-S-..EEE--EETT CS
  PF00622.23   2 gkhyfevevddggeshirvGwatke 26 
                 g++y+e e+ ++g   ++vGwa+  
  MMETSP1325-20131115|2367_1 148 GRWYYEAELLTAGV--MQVGWANHL 170
                 9************9..*****9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 824.90
//
Query:       MMETSP1325-20131115|2370_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 278.85
//
Query:       MMETSP1325-20131115|2372_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 284.01
//
Query:       MMETSP1325-20131115|2373_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|2371_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-07   31.3  15.2    0.00019   20.9   6.3    3.0  2  PF10269.4 Transmembrane Fragile-X-F protein
  ------ inclusion threshold ------
        6.7    4.8   7.6         14    3.7   5.2    1.5  1  PF09531.5 Nucleoporin protein Ndc1-Nup
        8.5    5.9  19.3        3.2    7.3   5.4    2.7  3  PF11026.3 Protein of unknown function (DUF2721)


Domain annotation for each model (and alignments):
>> PF10269.4  Transmembrane Fragile-X-F protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   6.3   4.1e-08   0.00019      48     212 ..      12     200 ..       2     201 .. 0.70
   2 !   13.5   2.0   7.6e-06     0.034     109     172 ..     181     240 ..     154     266 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 4.1e-08
   PF10269.4  48 alvlhllllafellvvikLetsnalswkivfiPlyvllvlsilalvdafrf...............................kdgseetmsdksielelf.yavnilqlvfaiaatvlllLkL..dkvvelswwvvfipliivlclallvvlylvilsvrilvrnrellvsqkekalasaigs..isiflvipvlvfkvll 212
                 +l+ ++  +a + l++ +L   + +s+ ++++Pl      +++ lv ++r                                 + ++e+  +k+  ++    a+ +l ++      v+l+L    d+v +++ww+v++p++i+++  +l     ++ +    +     +++++++++a+ + +  +s++ + +++ f v++
  MMETSP1325-20131115|2371_1  12 SLMGTIAGVAWQFLLALHLSGVSFVSYPVALLPL---AFNEVIVLVRNLRKakassvllaelgvltsggvsameeaaaaevkARLEAEVEARKQSRRSAGlAAMRLLGTLS-----VMLALFVdgDDVGAVNWWIVCTPFWIMFGSEFL---ADCVDAW-AHMSAAAAIPEADQERAAQLWTTgcASVCHACCAVSFVVVA 200
                 6666777788889999999889999999999999...66777777777777777888999999999999888887777666545555544444333333303334444444.....666666699********************9999...4444444.33344566777766666665555459999999999999875 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 7.6e-06
   PF10269.4 109 ksielelfyavnilqlvfaiaatvlllLkLdkvvelswwvvfipliivlclallvvlylvilsv 172
                 ++ + ++ +a  ++++v    a+vl++ kL++    s w vf p++++ +l++l +++lv+++ 
  MMETSP1325-20131115|2371_1 181 TTGCASVCHACCAVSFVV--VAAVLAVAKLSGASYSSCW-VFAPVFVAGGLLCL-CMSLVVCCA 240
                 566788899999999999..9999******888777777.59********9999.777666665 PP

>> PF09531.5  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   5.2    0.0032        14      10      65 ..     186     238 ..     180     242 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0032
   PF09531.5  10 aaiallllllyllllvflllskfsiqwsslslsllpsgstgirllllflalllili 65 
                  ++  + ++++++++++l  +k+s+ + s ++ + p    ++++ ll+l++ l++ 
  MMETSP1325-20131115|2371_1 186 SVCHACCAVSFVVVAAVLAVAKLSGASYSSCWVFAPV---FVAGGLLCLCMSLVVC 238
                 5667788889999899999899997777777777777...9**********99876 PP

>> PF11026.3  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.3      0.62   2.8e+03      96     113 ..      19      36 ..       9      58 .. 0.63
   2 ?    6.9   0.1    0.0009       4.1      39      78 ..      86     125 ..      67     127 .. 0.76
   3 ?    7.3   5.4   0.00069       3.2      65     115 ..     185     238 ..     162     241 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.62
   PF11026.3  96 availFilallllilsll 113
                  va+ F+lal l  +s++
  MMETSP1325-20131115|2371_1  19 GVAWQFLLALHLSGVSFV 36 
                 445555555555555444 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0009
   PF11026.3  39 ekedeelrkekaelknlrrRlrlirraillatlsallivl 78 
                 ++e +++ +++ e ++++rR   + ++ ll+tls++l+ +
  MMETSP1325-20131115|2371_1  86 AAEVKARLEAEVEARKQSRRSAGLAAMRLLGTLSVMLALF 125
                 23333333338889*********************99865 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.00069
   PF11026.3  65 aillatlsallivlvilllflsall..elelslavailFila.llllilslllf 115
                 a ++ +++a+ +v+v ++l +++l+  + +  +++a++F+++ ll+l++sl+++
  MMETSP1325-20131115|2371_1 185 ASVCHACCAVSFVVVAAVLAVAKLSgaSYSSCWVFAPVFVAGgLLCLCMSLVVC 238
                 5667788888888888888888888445666789999**985378999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       739  (0.0540521); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.38s 00:00:01.02 Elapsed: 00:00:00.56
# Mc/sec: 1236.02
//
Query:       MMETSP1325-20131115|2375_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.69
# Mc/sec: 204.91
//
Query:       MMETSP1325-20131115|2369_1  [L=497]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-38  130.9   0.0    9.2e-38  129.3   0.0    1.7  2  PF11288.3 Protein of unknown function (DUF3089)
    9.6e-05   22.2   0.1    9.6e-05   22.2   0.1    2.1  2  PF12697.2 Alpha/beta hydrolase family
     0.0048   16.5   0.0      0.011   15.4   0.0    1.6  1  PF12695.2 Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.067   12.4   0.0       0.11   11.7   0.0    1.3  1  PF08237.6 PE-PPE domain


Domain annotation for each model (and alignments):
>> PF11288.3  Protein of unknown function (DUF3089)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.3   0.0   2.7e-41   9.2e-38       2     168 ..     176     356 ..     175     366 .. 0.85
   2 ?   -2.0   0.0      0.44   1.5e+03     179     205 ..     385     411 ..     374     413 .. 0.74

  Alignments for each domain:
  == domain 1    score: 129.3 bits;  conditional E-value: 2.7e-41
   PF11288.3   2 vdvFfvhPTvyldksewnadlddeearalar.....vvlaaqasafnevgrvfAPrYRqatlaaf...letdkee....aekalelaysDVkrAFaaylaee.negrpiiLaGhsQGsllllrLlreeiagkplqkrlvaAyligapvsveev.gslaslpacatadqtgcvvsyvsfaea 168
                 +dvF+ hPT+ l+  +wn+ + d++  ++a       ++++ a+af+e+++v+APrYRq+ + a    l++++++     ++ +++a +D+k+AF+a+la++ ++ rp+++a+hsQGs+l+++++++ ++g++ ++ +vaAyl g  vs + + + ++s+  ca +++ +c++sy + ++ 
  MMETSP1325-20131115|2369_1 176 CDVFYAHPTTLLGFLTWNMLVPDKKPGSIAGmfgrgDLIHEHAGAFAESCNVWAPRYRQMGFLAQgqnLDANDPTvlanVKASMAMALADLKAAFKAFLAQRpDKTRPFVIAAHSQGSILMTKVIADCVEGTDAEQCFVAAYLAGGYVSRDLFgTVFQSVHECAGPTDLKCIISYDTRTAV 356
                 7********************99998666541111156899*******************9999844333444446665667799**************99825679**********************************************999*******************998543 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.44
   PF11288.3 179 ealegsrgksrdegeellcvnPlllaa 205
                     + ++k+ d +++ + +nPl+++ 
  MMETSP1325-20131115|2369_1 385 CDYGTIEHKMDDCSKPRVQTNPLTWTH 411
                 5555666778888889999******86 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.3      0.12   4.3e+02     132     179 ..      73     137 ..       3     168 .. 0.44
   2 !   22.2   0.1   2.8e-08   9.6e-05       5      89 ..     205     305 ..     204     470 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.12
                 H..HHHHH-----HHHHHH--GGGG....GG................------HHHHTT-.-S-E CS
   PF12697.2 132 arafarlfdgdelealvradaaalaellraa................lldadlrealarl.dvPv 179
                 a++f+ +++++  +++++  +a++a+++                   +  +++r++++++ ++P+
  MMETSP1325-20131115|2369_1  73 ASKFDWMMPRHPARQVIATRRARIARVVLVViakkvpcrrgwahtvaRCVSSPRARAGWVaSCPA 137
                 23333333333334444332222222222212222222222222222233333334444333444 PP

  == domain 2    score: 22.2 bits;  conditional E-value: 2.8e-08
                 -----------HHHHHHTTTSEEEEE-----------S...S--H..............HHHHHHHHHHHHH--...--EEEE--------HHHHHH---- CS
   PF12697.2   5 HGlggsaeswrplaeaLaagyrvvapDlpGhGrSdrppdydpdtl..............edlaadlaalldalgl..rpvvlvGHSlGgavalaaaarrpd 89 
                  G++g ++  ++ a a+a+ ++v+ap ++ +G+ +   + d++++              +dl a++ a+l++     rp+v+ +HS+G ++ + + a++ +
  MMETSP1325-20131115|2369_1 205 AGMFGRGDLIHEHAGAFAESCNVWAPRYRQMGFLAQGQNLDANDPtvlanvkasmamalADLKAAFKAFLAQRPDktRPFVIAAHSQGSILMTKVIADCVE 305
                 688999999999********************9987776554444233444433322223333355555555544999**************999987544 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.2e-06     0.011       7      78 ..     206     309 ..     204     402 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.2e-06
   PF12695.2   7 Gaggdssayeplaealakrgfavvavdlpghgasegaa..........................aakrvlaadll.dleriilvGhSlGGgvalelag.......r 78 
                 G+ g ++  +  a a+a+  ++v+a+ ++  g  ++ +                          a k++l a+++ ++++ +++ hS+G+ +++ + +        
  MMETSP1325-20131115|2369_1 206 GMFGRGDLIHEHAGAFAES-CNVWAPRYRQMGFLAQGQnldandptvlanvkasmamaladlkaAFKAFL-AQRPdKTRPFVIAAHSQGSILMTKVIAdcvegtdA 309
                 5556666677888899986.*********99997444447777888888887777777776666666666.77778999*************99999866555441 PP

>> PF08237.6  PE-PPE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.3e-05      0.11      24      76 ..     254     310 ..     232     337 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.3e-05
   PF08237.6  24 tvdesvaeGvenLnaairaqla....agepvvvfGySqGalvaalekarlaasgdpe 76 
                 +v+ s+a + + L+aa +a la    +++p+v++++SqG++ +++++a+ ++  d e
  MMETSP1325-20131115|2369_1 254 NVKASMAMALADLKAAFKAFLAqrpdKTRPFVIAAHSQGSILMTKVIADCVEGTDAE 310
                 567788888888998888888777778999*****************9998855544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.37s 00:00:01.17 Elapsed: 00:00:00.56
# Mc/sec: 2089.46
//
Query:       MMETSP1325-20131115|2365_1  [L=574]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-09   37.0   0.0    5.7e-09   36.0   0.0    1.6  1  PF00169.24 PH domain
    0.00068   19.6   0.0     0.0038   17.2   0.0    2.2  2  PF00595.19 PDZ domain (Also known as DHR or GLGF)
  ------ inclusion threshold ------
      0.086   11.8   0.0       0.14   11.1   0.0    1.3  1  PF01688.12 Alphaherpesvirus glycoprotein I
       0.15   11.9   0.0       0.26   11.1   0.0    1.3  1  PF10012.4  Uncharacterized protein conserved in bacteria (DUF2255)


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   1.7e-12   5.7e-09       4     102 ..       4     110 ..       1     112 [. 0.92

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 1.7e-12
                 EEEEEEEETSSSCEEEEEEEEET...TEEEEESSSST.............TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24   4 eGyllkksellktwkkryfvLts...nyLlyfksskk.............ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                 +G+l+k+++  +twkkryf+L      +Lly+ ++                ++k p+g ipl ++++ k ++         ++ fei   d++s+ l   +e er +W++ ++++
  MMETSP1325-20131115|2365_1   4 HGWLTKQGHMMPTWKKRYFILVMkptVRLLYYAERPPsperviesegqdgGNNKPPQGEIPLAGAKFGKKDDG--------HFGFEIISADGKSFPLRGVNEVERGAWIEVIQEV 110
                 7********************99888666666666666*****************************999996........9*******************************97 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.1   3.8e+03      20      41 ..     355     375 ..     347     378 .. 0.76
   2 !   17.2   0.0   1.1e-06    0.0038      10      78 ..     467     541 ..     461     543 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1.1
                 STTSSSSEEEEESTTTHHTTTT CS
  PF00595.19  20 sdkrdkgifvsevvpggaaeag 41 
                 +d+ +++i+ + +v +gaa++ 
  MMETSP1325-20131115|2365_1 355 EDE-AREIVLNLLVDDGAAQRE 375
                 333.379999999999***986 PP

  == domain 2    score: 17.2 bits;  conditional E-value: 1.1e-06
                 SH---EEEESSTTS......SSSEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTSHHHHHHHHHHTHHSEEEE CS
  PF00595.19  10 gglGfslkggsdkr......dkgifvsevvpggaaeagglkeGDkIlsvNgvdvenvshdeavqaikgkkgevtL 78 
                 ++lG++l   + k+       + ++v+ ++pgg+ +++g+ +G  +l +Ng+++       a +++kg+++++tL
  MMETSP1325-20131115|2365_1 467 NKLGIQLEPREGKGalegetCELVVVKALQPGGSCQRAGVTVGSHLLFINGQTTHYCGYQGAMDLLKGASRPLTL 541
                 678888888888778888877889*********************************************999998 PP

>> PF01688.12  Alphaherpesvirus glycoprotein I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   4.2e-05      0.14      40      72 ..     497     533 ..     481     538 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.2e-05
  PF01688.12  40 p....tdedltirGeLlFlgdqvpstnnYsGtvellh 72 
                 p    +++ +t+  +LlF+++q+ +   Y+G++ ll+
  MMETSP1325-20131115|2365_1 497 PggscQRAGVTVGSHLLFINGQTTHYCGYQGAMDLLK 533
                 34444788899************************97 PP

>> PF10012.4  Uncharacterized protein conserved in bacteria (DUF2255)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.7e-05      0.26      56      99 ..     286     328 ..     280     340 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 7.7e-05
   PF10012.4  56 laqkagrikaagvekdVefeevtdkelndkidaaYrakygksay 99 
                 l++ +gri+++ +e+dVe+++v+++ +++++ +a  +k+++ + 
  MMETSP1325-20131115|2365_1 286 LQSDEGRITLKPLEYDVELSKVSEDRIQAHLAHAASEKSAE-QL 328
                 57899****************************99999887.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.94u 0.38s 00:00:01.31 Elapsed: 00:00:00.56
# Mc/sec: 2413.17
//
Query:       MMETSP1325-20131115|2377_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 254.93
//
Query:       MMETSP1325-20131115|2378_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-14   52.0   0.1    6.1e-14   51.6   0.1    1.1  1  PF00378.15 Enoyl-CoA hydratase/isomerase family
  ------ inclusion threshold ------
      0.092   12.3   0.0        0.1   12.2   0.0    1.1  1  PF01904.13 Protein of unknown function DUF72


Domain annotation for each model (and alignments):
>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.1   8.9e-18   6.1e-14       4      71 ..      36     106 ..      34     113 .. 0.88

  Alignments for each domain:
  == domain 1    score: 51.6 bits;  conditional E-value: 8.9e-18
                 -----EEEEE-----S----HHHHHHHHHH.HHHHHH-TT--.--EEE----SSB----HHHCHHH.-CHH CS
  PF00378.15   4 lengvavikldrpekvNalsaelleelkea.lekleadksik.aivlsggekaFsaGaDikelaae.teae 71 
                 + +gvavi+ld pek+N +sae+ +e  +  +e++e+++++k a+ +s++++ F+aGaDik+l a  +e +
  MMETSP1325-20131115|2378_1  36 VVDGVAVIRLDGPEKMNVISAEMRDEAEKLwVEHIENNSDVKaAVFISSKPDNFIAGADIKMLKAIkQEGQ 106
                 6689**********************988538*******************************99933333 PP

>> PF01904.13  Protein of unknown function DUF72
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.5e-05       0.1     161     227 ..      35      99 ..       4     101 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.5e-05
                 ---STTB--EEE--------TB----HHHHHHHHHHHHHHHTC-SEE--EE-S.B----HHHHHHHHH CS
  PF01904.13 161 evtaadfvyvRlhgrnelewyeyrYsdeeleewaerirawaaegrevyvffnn.dakgrapenAlrLa 227
                 ev+  +++++Rl g+++ +++++++ de+ + w+e+i++ ++   ++ vf++  +++  a +++++L+
  MMETSP1325-20131115|2378_1  35 EVVD-GVAVIRLDGPEKMNVISAEMRDEAEKLWVEHIENNSD--VKAAVFISSkPDNFIAGADIKMLK 99 
                 4555.9********************************8777..555555555366666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 560.75
//
Query:       MMETSP1325-20131115|2379_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0064   15.8   0.5      0.008   15.5   0.3    1.1  1  PF13491.1 Domain of unknown function (DUF4117)


Domain annotation for each model (and alignments):
>> PF13491.1  Domain of unknown function (DUF4117)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.3   5.9e-07     0.008      92     158 ..      19      85 ..       7     100 .. 0.72

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 5.9e-07
   PF13491.1  92 rllgllllllasaala..alrlasleatlpfgaGGllGrllagalltllgftGalllllvlllvglslv 158
                 +++++   ++ s++++  ++rl++++    + aGG+ G +l  +  ++  f+Ga+++l+++++v+++++
  MMETSP1325-20131115|2379_1  19 KFIAFEKSVMDSTSILvrSSRLPGPGR--RGPAGGIRGLMLTLFREQFCIFIGAIFVLIAAFFVATTAL 85 
                 555555555555555434667776555..589****************************999998764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       515  (0.0376682); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|2382_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0068   15.7   6.4      0.007   15.7   4.4    1.1  1  PF10500.4 Nuclear RNA-splicing-associated protein
  ------ inclusion threshold ------
       0.59    8.5   3.0       0.74    8.1   2.1    1.1  1  PF06333.7 Mediator complex subunit 13 C-terminal
        1.1    7.4   4.8        1.2    7.4   3.3    1.0  1  PF09786.4 Cytochrome B561, N terminal
        4.8    6.6   5.5        5.6    6.4   3.8    1.1  1  PF04370.7 Domain of unknown function (DUF508)


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   4.4     2e-06     0.007      39     112 ..       9      82 ..       1     110 [. 0.72

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2e-06
   PF10500.4  39 sksskesrkkrekkkkkrrersssssssssssssssssssskseekrkkrkkkkkkrekkkekkekkklkkkgk 112
                 s s+  + ++  k+ ++ r+ s ss ss ss++ +s ss  +  e +kkr +  +  ++ k+  + k   kk +
  MMETSP1325-20131115|2382_1   9 SPSTTTAATSDPKEGEQERTTSNSSNSSGSSTTKPSYSSFPTPTEPAKKRSTFMSGWKAAKNLVKGKDSSKKRH 82 
                 44555567777788888898888888999999999999999999999999988877666555444444433333 PP

>> PF06333.7  Mediator complex subunit 13 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.1   0.00022      0.74     239     299 ..      16      74 ..       5      88 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00022
   PF06333.7 239 mldpptedsvfsknlqtsnsstPqdtpgthilvfpspaqfqnapsnflsesqdlasttgls 299
                 ++  p+e++ + +++++s++s+ ++t++++  +fp+p++ +++ s+f+s ++ +a++ ++ 
  MMETSP1325-20131115|2382_1  16 ATSDPKEGE-QERTTSNSSNSSGSSTTKPSYSSFPTPTEPAKKRSTFMSGWK-AAKNLVKG 74 
                 223333333.3347999999999**************************944.44443322 PP

>> PF09786.4  Cytochrome B561, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   3.3   0.00034       1.2     162     235 ..       6      80 ..       1     101 [. 0.65

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00034
   PF09786.4 162 rsksssakfsssstsqq.skqltsskklaspsslslspsyssslsvvessgnrsklasspwalksssakkdittd 235
                 ++ s+s     +s +++ ++  t s++ +s  s++ +psyss  ++ e  ++rs + s   a k+  + kd+   
  MMETSP1325-20131115|2382_1   6 AVDSPSTTTAATSDPKEgEQERTTSNSSNSSGSSTTKPSYSSFPTPTEPAKKRSTFMSGWKAAKNLVKGKDSSKK 80 
                 44444444433333333033334467777777999*************999999986655556666666666555 PP

>> PF04370.7  Domain of unknown function (DUF508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   3.8    0.0016       5.6       5      48 ..      15      57 ..       9      83 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0016
   PF04370.7  5 kstkdtkkvivsvstsasstvdasskkslpsstylsnyekisak 48
                 +t d+k++  + +ts ss ++ ss+   ps++  +  ++ ++k
  MMETSP1325-20131115|2382_1 15 AATSDPKEGEQERTTSNSSNSSGSSTT-KPSYSSFPTPTEPAKK 57
                568999***999999999999888875.4776444443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       672  (0.0491516); expected 273.4 (0.02)
Passed bias filter:                      460  (0.0336454); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 550.27
//
Query:       MMETSP1325-20131115|2381_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   12.6   0.0      0.037   12.3   0.0    1.1  1  PF11850.3 Protein of unknown function (DUF3370)


Domain annotation for each model (and alignments):
>> PF11850.3  Protein of unknown function (DUF3370)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.7e-06     0.037     327     394 ..      89     157 ..      73     174 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.7e-06
   PF11850.3 327 nYGveY...dltLpLknks.kqaqtvelvletPlkedkskeelrFleepkeevfFRGtvrvryeddegqsqe 394
                  YGveY   d++L+L++++ +q q  el++   +++++      ++++   + f+RGt+++ +  +++++ +
  MMETSP1325-20131115|2381_1  89 RYGVEYedgDVELNLSGEGiRQLQGAELTMPRSTRHGR---MWYYSTKGGWQAFYRGTIKLAGLFSDANEAT 157
                 6*****7777*******983455667777666555555...66777778889********997655544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 798.79
//
Query:       MMETSP1325-20131115|2383_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        8.4    5.5   7.6        3.1    7.0   3.4    1.6  2  PF04207.7 Tetrahydromethanopterin S-methyltransferase, subunit D


Domain annotation for each model (and alignments):
>> PF04207.7  Tetrahydromethanopterin S-methyltransferase, subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   3.4   0.00023       3.1      26      64 ..       7      48 ..       4      71 .. 0.80
   2 ?   -1.0   0.0     0.063   8.6e+02      32      48 ..      87     103 ..      56     105 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00023
   PF04207.7 26 fvpvggapaama...tatgvgtgttqlaagagltglitaavm 64
                 vp gga  a+a   t+t v + t+  a g+g t  ++ a  
  MMETSP1325-20131115|2383_1  7 LVPSGGAQRAIAadsTSTSVPAATATAAEGSGSTNTVGLAPS 48
                5999**986665333899****************99986644 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.063
   PF04207.7  32 apaamatatgvgtgttq 48 
                  paa a+  g g g ++
  MMETSP1325-20131115|2383_1  87 GPAAAASPLGFGFGNIR 103
                 36777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.67
# Mc/sec: 379.13
//
Query:       MMETSP1325-20131115|2384_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.96    9.1   3.1        1.3    8.7   2.1    1.2  1  PF14014.1 Protein of unknown function (DUF4230)
        2.2    8.2  10.5        2.8    7.8   7.2    1.3  1  PF06112.6 Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF14014.1  Protein of unknown function (DUF4230)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.1   0.00019       1.3     114     141 ..       3      31 ..       1      41 [. 0.90

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00019
   PF14014.1 114 eakekvekaalesg.lleqAeknakkale 141
                  ak+k+e++a++++ + ++A+ nak ale
  MMETSP1325-20131115|2384_1   3 AAKAKAEEEAEDKQrVEKDARTNAKAALE 31 
                 699********8888***********998 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   7.2    0.0004       2.8      71     139 ..      27      96 ..       6     113 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0004
   PF06112.6  71 kkhlqalrgakpets.ssigsalsassssasgvpggaalSsssvsalsSgp..sslsssssesssdasagdt 139
                 k  l+   +a p t+ ++   ++s+++ s+++++g++a S+ +++ + + p  s l++s+s++++ a+a  t
  MMETSP1325-20131115|2384_1  27 KAALEDETDASPVTNgEDGADGTSGATGSGPTPNGTSA-SGAEATLAVPLPvsSALVPSTSDAGASANAS-T 96 
                 55677777777765514555688999888888875555.5555555544441133445555554444442.1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       579  (0.0423493); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|2385_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.31s 00:00:00.62 Elapsed: 00:00:00.55
# Mc/sec: 148.14
//
Query:       MMETSP1325-20131115|2380_1  [L=421]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.23   12.0  13.0       0.12   12.8   3.6    2.4  2  PF13007.2 Transposase C of IS166 homeodomain
        3.3    8.3  13.7          5    7.7   0.5    2.9  3  PF11942.3 Spt5 transcription elongation factor, acidic N-terminal


Domain annotation for each model (and alignments):
>> PF13007.2  Transposase C of IS166 homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   3.6   1.8e-05      0.12      20      67 ..     284     329 ..     280     334 .. 0.79
   2 ?    3.4   0.6     0.016   1.1e+02      35      66 ..     374     405 ..     363     414 .. 0.59

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.8e-05
   PF13007.2  20 EkldarqieQleLfeeleaaaaeaeaeaeeaaaetaarrrkrrkpgRk 67 
                 E +d++   Q+ L e +e+aaaea+a++ ++ +++a++ ++++k+gR+
  MMETSP1325-20131115|2380_1 284 EARDEA--RQRLLHEAMEQAAAEAAADLNQTLTPDARQPKAKKKKGRA 329
                 555433..577777***********************66666777776 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.016
   PF13007.2  35 eleaaaaeaeaeaeeaaaetaarrrkrrkpgR 66 
                 e+ a+ +e+e+e++e+a +t a + +r  + R
  MMETSP1325-20131115|2380_1 374 EAFADSEEEEDEEDEEAGTTGAGAXERDDADR 405
                 45555566666666666666654444444444 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.54   3.7e+03      20      35 ..     103     118 ..      85     156 .. 0.59
   2 ?    7.7   0.5   0.00073         5      24      69 ..     274     319 ..     269     336 .. 0.79
   3 ?    5.2   3.3    0.0044        30       5      29 ..     374     394 ..     373     418 .. 0.48

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.54
   PF11942.3  20 deeeelseeaefieea 35 
                 ++ +el+++ +f+++ 
  MMETSP1325-20131115|2380_1 103 KKLQELDNTTFFHDHV 118
                 3445555666666555 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.00073
   PF11942.3  24 elseeaefieeaeddrrhreldrrrekeeeedaeelaevlklekrY 69 
                  l+++a+f +ea+d++r+r l + +e+ + e a +l ++l    r 
  MMETSP1325-20131115|2380_1 274 KLIDTAGFSDEARDEARQRLLHEAMEQAAAEAAADLNQTLTPDARQ 319
                 5778899999****************************99644554 PP

  == domain 3    score: 5.2 bits;  conditional E-value: 0.0044
   PF11942.3   5 EAevddeeeEeeeeedeeeelseea 29 
                 EA  d eeeE+ee+e+      +++
  MMETSP1325-20131115|2380_1 374 EAFADSEEEEDEEDEE----AGTTG 394
                 5666777777774442....22222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1074  (0.0785547); expected 273.4 (0.02)
Passed bias filter:                      633  (0.046299); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.39s 00:00:01.25 Elapsed: 00:00:00.85
# Mc/sec: 1186.90
//
Query:       MMETSP1325-20131115|2387_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       852  (0.0623171); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.63
# Mc/sec: 1281.86
//
Query:       MMETSP1325-20131115|2388_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.057   13.5   0.0       0.09   12.8   0.0    1.3  1  PF00169.24 PH domain
        3.2    6.2   5.4        3.5    6.0   3.7    1.2  1  PF04388.7  Hamartin protein


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.3e-05      0.09      29     102 ..       9      75 ..       8      77 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.3e-05
                 EEEESSSSTTCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24  29 Llyfksskkksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                 L+y+k ++   +++   ++ l    ++ + ++      ++   +f i +++++ yl +a se e+++Wv+al ++
  MMETSP1325-20131115|2388_1   9 LVYYKTPE---REKILNAVKLHRTsQIAISDKE-----ETGVGVFGIEMESSQVYLHKAASESEAEKWVAALVQC 75 
                 67777777...4555555555555344444443.....46889999*************************9876 PP

>> PF04388.7  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   3.7   0.00051       3.5     302     387 ..      79     166 ..      35     206 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00051
   PF04388.7 302 stsgslrsaqtsrrsesrfDkaassdtkdslwspss.lcglatppssiglsP..lelslsashlssrvkgetgsgklelasestpstss 387
                  ++++       rr    +D+  s + ++s++sps+ ++g++ ++  ++ +    + +++++  +s +++ + s++ + as  +  ts 
  MMETSP1325-20131115|2388_1  79 AIQQKAAARV-ARRASLSIDSLGSNGGDESMDSPSTpGAGITLTSGRRPSTSgtRSKAADPAVDTSSANAASTSSPATTASGDLRLTSG 166
                 4555444444.4788888****************9746777777777766665555566777777777777777777777755544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1020.85
//
Query:       MMETSP1325-20131115|2391_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|2392_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-11   41.8   0.0    5.4e-11   41.7   0.0    1.1  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0     4e-15   5.4e-11      16      72 ..      74     132 ..      44     138 .] 0.85

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 4e-15
  PF00248.16  16 edealellraaleaGinlfDtAeyYgkgqseellgealkk....srkkreeviiatKvgri 72 
                 +++ ++++r+ le+Gin+f tA  Y  g se+++  al++     +++re++ii+tKv ++
  MMETSP1325-20131115|2392_1  74 QENLIATIRRSLELGINHFETALGY--GSSEIQFSDALAQliasGEVNREDIIIQTKVAPK 132
                 6778899******************..***************99**************333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 661.39
//
Query:       MMETSP1325-20131115|2393_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-19   67.1   0.5    4.5e-17   61.3   0.1    2.3  2  PF00364.17 Biotin-requiring enzyme
    3.8e-05   23.8   0.1        0.5   10.6   0.0    2.7  3  PF13437.1  HlyD family secretion protein
      6e-05   22.5   0.9      0.013   15.0   0.0    2.6  3  PF13533.1  Biotin-lipoyl like
  ------ inclusion threshold ------
      0.093   12.3   0.0       0.19   11.3   0.0    1.5  1  PF09891.4  Uncharacterized protein conserved in archaea (DUF2118)


Domain annotation for each model (and alignments):
>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0   0.0      0.01        34      15      48 ..      69     103 ..      56     109 .. 0.80
   2 !   61.3   0.1   1.3e-20   4.5e-17       3      73 ..     155     219 ..     153     220 .. 0.97

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.01
                 --ECCESS----.---CTSEEEEEESSSSEEEEEB CS
  PF00364.17  15 gtvvevlvkvGd.kVkagqvlaeveamKmemeiea 48 
                 +t++   v vGd + + +q+l+eve + ++  +++
  MMETSP1325-20131115|2393_1  69 ATTAAARVRVGDySWQMEQPLLEVEMDGVSRVVQY 103
                 467778889998446889********988877776 PP

  == domain 2    score: 61.3 bits;  conditional E-value: 1.3e-20
                 ES-S----EEEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEESS-TT-EE----ECEE CS
  PF00364.17   3 iksPmiGesvkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllak 73 
                 + sPm+G +v+        v++G+ ++ gq ++++eamKm++ + +p aGvv+e ++  G++++v++l++ 
  MMETSP1325-20131115|2393_1 155 VHSPMPGVLVS------LSVEPGQRIENGQEICVMEAMKMQNVLRSPRAGVVAETHAVAGQKLDVDQLIVS 219
                 789********......****************************************************86 PP

>> PF13437.1  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.1   3.8e+03      54      89 ..      42      76 ..      24      85 .. 0.66
   2 !   10.6   0.0   0.00015       0.5       2      28 ..     155     181 ..     154     187 .. 0.92
   3 !   10.4   0.1   0.00017      0.57       1      34 [.     191     225 ..     191     233 .] 0.87

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 1.1
   PF13437.1 54 gqkvtlklddgpektlegkvesisptvdpeegtykv 89
                g +++++++   +  l  +v+++++++ +++ +++v
  MMETSP1325-20131115|2393_1 42 GTNYHVRIA-DEDGGLVIEVRKLAADTSATTAAARV 76
                455555554.33446666666666666665555555 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00015
   PF13437.1   2 lrApvdGvVhevnvqegqvvaagdpla 28 
                 + +p+ Gv+++++v++gq ++ g+++ 
  MMETSP1325-20131115|2393_1 155 VHSPMPGVLVSLSVEPGQRIENGQEIC 181
                 679*********************985 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 0.00017
   PF13437.1   1 tlrApvdGvVhevnvqegqvvaagdplaeiipt.d 34 
                 +lr+p +GvV+e  +  gq +   + +++++++  
  MMETSP1325-20131115|2393_1 191 VLRSPRAGVVAETHAVAGQKLDVDQLIVSLVDEaT 225
                 58*****************************9844 PP

>> PF13533.1  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.3   4.4e+03       4      22 ..      62      80 ..      59      81 .. 0.67
   2 !   15.0   0.0   3.7e-06     0.013       5      34 ..     155     184 ..     154     194 .. 0.84
   3 !    5.5   0.2    0.0034        12       6      38 ..     193     225 ..     189     232 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 1.3
   PF13533.1  4 sIappvsGrVeevlVkeGq 22
                ++a++ s++ ++  V+ G+
  MMETSP1325-20131115|2393_1 62 KLAADTSATTAAARVRVGD 80
                5667777777777788777 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 3.7e-06
   PF13533.1   5 IappvsGrVeevlVkeGqeVkkGDvLleld 34 
                 +++p +G+++++ V +Gq+ + G+ + + +
  MMETSP1325-20131115|2393_1 155 VHSPMPGVLVSLSVEPGQRIENGQEICVME 184
                 789*********************887665 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.0034
   PF13533.1   6 appvsGrVeevlVkeGqeVkkGDvLleldsekl 38 
                 ++p +G+V+e +++ Gq     ++++ l +e++
  MMETSP1325-20131115|2393_1 193 RSPRAGVVAETHAVAGQKLDVDQLIVSLVDEAT 225
                 68889********************99988765 PP

>> PF09891.4  Uncharacterized protein conserved in archaea (DUF2118)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   5.4e-05      0.19      86     131 ..     158     202 ..     152     220 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 5.4e-05
   PF09891.4  86 pvegykvtlivdvGdrvrkgdalaavttrkgevrylrspveGvVvf 131
                 p+ g+ v+l v+ G+r+++g+ + ++++ k +   lrsp+ GvV+ 
  MMETSP1325-20131115|2393_1 158 PMPGVLVSLSVEPGQRIENGQEICVMEAMKMQ-NVLRSPRAGVVAE 202
                 678999***********************987.789*******975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 1015.18
//
Query:       MMETSP1325-20131115|2390_1  [L=367]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-08   33.5   0.0      4e-08   32.7   0.0    1.5  1  PF05822.7 Pyrimidine 5'-nucleotidase (UMPH-1)
     0.0017   18.4   0.0     0.0029   17.6   0.0    1.3  1  PF12710.2 haloacid dehalogenase-like hydrolase
     0.0069   16.5   0.1      0.018   15.1   0.0    1.7  2  PF13419.1 Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF05822.7  Pyrimidine 5'-nucleotidase (UMPH-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0   8.7e-12     4e-08      14     199 ..      98     288 ..      91     363 .. 0.85

  Alignments for each domain:
  == domain 1    score: 32.7 bits;  conditional E-value: 8.7e-12
   PF05822.7  14 ptsygildesksiseevkkklkelydkYypi..eidpsltieekvpymveWwskahdllieqklkkeeiaevvkesk....aelrdgveelfekleeleiPvliFsaGlgdvieevlrqanvvhs.nvkvvsnflqfdddgvlkgfkgklihvfnknesvlkdteyfdelkkrtniillGDslGDlsmadGvp 199
                   ++ +l +s  ++e +++ + +l+d       e+d      +       +w + ++ll + +++++ +++ v+  k    + lr gv el++  +e    v+i saG+ +vi + + + +v  +   +++ n l fdd ++  +++       +  e  lk  +  + l++r  ++l+GD+  D+ +  G+p
  MMETSP1325-20131115|2390_1  98 AECHHMLRDSPAMPEAFRQDVWTLFDARDEAhpEHDAIFGAPDAPDRPHRFWMHYNKLLAKHRITRSMVDRAVAGEKkvsgDLLRPGVGELLALCDEVGALVVILSAGIEQVIRSSFAHDGVALPaGCHILTNTLVFDDHDCCVAVEPTAP--PASREGKLKLLNDLEPLRERRLVLLIGDKPVDARVGRGMP 288
                 56999999999999999999999988654332289999999999999999********************99975431112579************************************99876269*************9999876554..45667778878888999************99999999987 PP

>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   6.3e-07    0.0029      52     186 ..     150     280 ..      64     282 .. 0.66

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 6.3e-07
                 HHHHHHHHHT-HHHH----HHHHHHHHHH............................H--BHHHHHHH......HTTEEEE-SS-HHHHHHHHH....---EE--B--GGG-.----....HH----HHHHHHH.........HHSHHHHHHHH---T.T----S--EE---GGG CS
   PF12710.2  52 kdllellaeyggirviglaarylealakeieea.....................klfegfipdaaellkelheaglrvvvlsgdprliakpvak....elgidevnvlatel.edeg....ggkvdgritgkld.........gKaraverlvvlayk.qvggrivvaiGDsanD 186
                  ++++lla                                              +l++g+     ell+   e g  vv+ls++ ++++++  +    +l  + +++l+++l +d+      +          +         gK+ ++++l     +   ++r v+ iGD + D
  MMETSP1325-20131115|2390_1 150 MHYNKLLA------------------------KhritrsmvdravagekkvsgdLLRPGVG----ELLALCDEVGALVVILSAGIEQVIRSSFAhdgvALPAG-CHILTNTLvFDDHdccvAV----------EptappasreGKLKLLNDL-----EpLRERRLVLLIGDKPVD 280
                 23333333........................02222222222222333334447778888....***887677******************55455566655.5888999977666444422..........13333335567********.....888999********7665 PP

>> PF13419.1  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.76   3.5e+03      83     113 ..      41      70 ..       5      81 .. 0.59
   2 !   15.1   0.0     4e-06     0.018       4     113 ..      87     216 ..      84     223 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.76
   PF13419.1  83 vellrrlkakglklvilSngsaeavelllek 113
                  +l+++l+ + +++++++  ++  +e++l++
  MMETSP1325-20131115|2390_1  41 HPLIQTLR-RACPRGAVTLEDRGSLERFLSA 70 
                 34566666.6666666666666555555554 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 4e-06
   PF13419.1   4 DldgTLi.dfdfvikralrk..lvaerlgld.ltaaelrelggkpfeev................ladllrelpkdaeeilealkeanlesrlelfpdvvellrrlkakglklvilSngsaeavelllek 113
                 D+d T   +  ++++ +lr+  ++ e++++d +t  ++r++ + +++ +                +++ll+++++++  +++a++    +s   l+p+v ell+ + + g  +vilS g  + +++ +++
  MMETSP1325-20131115|2390_1  87 DFDLTMSaPLGAECHHMLRDspAMPEAFRQDvWTLFDARDEAHPEHDAIfgapdapdrphrfwmhYNKLLAKHRITRSMVDRAVAGEKKVSGDLLRPGVGELLALCDEVGALVVILSAGIEQVIRSSFAH 216
                 5555554345555677776666999***9999********9998888889999999999999999*******************9998889999************989********9977777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.41s 00:00:01.08 Elapsed: 00:00:00.57
# Mc/sec: 1516.32
//
Query:       MMETSP1325-20131115|2389_1  [L=681]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.02u 0.33s 00:00:01.35 Elapsed: 00:00:00.63
# Mc/sec: 2590.35
//
Query:       MMETSP1325-20131115|2396_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 430.46
//
Query:       MMETSP1325-20131115|2397_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.61
# Mc/sec: 357.49
//
Query:       MMETSP1325-20131115|2398_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        82  (0.00599766); expected 273.4 (0.02)
Passed bias filter:                       73  (0.00533938); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 372.77
//
Query:       MMETSP1325-20131115|2399_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-66  222.8   0.0    4.3e-66  222.6   0.0    1.0  1  PF00069.20 Protein kinase domain
    7.3e-44  149.7   0.0    9.2e-44  149.3   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
      7e-11   42.2   0.0    3.1e-10   40.2   0.0    2.1  2  PF00786.23 P21-Rho-binding domain
     0.0022   17.6   0.2      0.029   13.9   0.0    2.4  3  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
       0.12   11.0   0.0       0.18   10.5   0.0    1.2  1  PF07387.6  Seadornavirus VP7


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.6   0.0   1.6e-69   4.3e-66       1     260 []     106     355 ..     106     355 .. 0.95

  Alignments for each domain:
  == domain 1    score: 222.6 bits;  conditional E-value: 1.6e-69
                 EEEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   1 yelleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 ye l+k+G+G++G+Vy+a++k +g+kvA+K  + ee k+ k+     E+++    +Hpn+v l+e+f ++d+++l +e++ gg l d+l+++g+  e  +  +++  l+gl+++H+n  iHrD+K++N+L+d +g++kiaDFG+a  l+k++ k +++vgt+++mAPE+++ +++y++kvD+Ws+G+++ e++ g++p+ +e   ++l +i  +  ++++ ++ +s    + + +l++++l+k+p+kR  ae++l hpw+
  MMETSP1325-20131115|2399_1 106 YEDLKKVGAGASGTVYSATQKVSGQKVALKYCSIEELKEIKD-----EIAMQSLNRHPNVVALYEAFLTEDKICLSMELMSGGMLTDILSNNGNAPEPMVAYVTKCALQGLAFIHRNWRIHRDIKSDNLLVDMQGQVKIADFGFAVSLTKEEDKRNSVVGTPYWMAPELIR-SQGYDSKVDIWSFGITILEMTDGEPPLLNEPVMRALLMITLQDPPTTRDPSAWS----AAMHHLLRRCLAKEPKKRALAEQLLMHPWI 355
                 67899*********************************9998.....888777779*******************************************************************************************************************.******************************888888888777777777776666....89***************************7 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.3   0.0   3.4e-47   9.2e-44       4     255 ..     109     349 ..     106     352 .. 0.87

  Alignments for each domain:
  == domain 1    score: 149.3 bits;  conditional E-value: 3.4e-47
                 EEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH..HTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  PF07714.12   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell..kegkrlekpekcpeelyelmkqCweeepeeRptfkel 255
                  kk+G+Ga G+V+++t k     + +kVa+K +    + ee +e+ +e+++ +  +hpn+v l+ ++++e+++++ +e+++gG L ++L ++   +     +  ++    +G+++++++  +Hrd+ + N L++ + +vki+DfG a ++  +++  k+++      WmapE+++++ + sk D+WsfG+++ E+   ge p  +   +++l ++  ++    + p+ +++ +++l+++C+++ep++R   ++l
  MMETSP1325-20131115|2399_1 109 LKKVGAGASGTVYSATQK----VSGQKVALKYC----SIEELKEIKDEIAMQSLNRHPNVVALYEAFLTEDKICLSMELMSGGMLTDILSNN--GNAPEPMVAYVTKCALQGLAFIHRNWRIHRDIKSDNLLVDMQGQVKIADFGFAVSL--TKEEDKRNSVVGTPYWMAPELIRSQGYDSKVDIWSFGITILEMTD-GEPPLLNEPVMRALLMItlQDPPTTRDPSAWSAAMHHLLRRCLAKEPKKRALAEQL 349
                 589*************99....8899******9....555678999999876666************************************9..55555555566666669***************************************..445566777888899***************************987.999998886666555553488889999***********************987776 PP

>> PF00786.23  P21-Rho-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.0   1.1e-13   3.1e-10       2      58 ..      16      73 ..      15      74 .. 0.91
   2 ?   -1.8   0.0       1.5   4.1e+03      32      56 ..     143     166 ..     138     167 .. 0.78

  Alignments for each domain:
  == domain 1    score: 40.2 bits;  conditional E-value: 1.1e-13
                B---EEEEEEEEEEEBTTTTBEE..---HHHCCCH-XX.XXXXXXXXXXXXXXXXXXXX CS
  PF00786.23  2 IStPtdfkHvaHVGfdgqsgfft..glppewkkllkssgissdeqkknpkavlsvvkfr 58
                I+ P+++kH +HV  d++s  +   glp  w+++l +sgis++e  +np+ ++ +++f 
  MMETSP1325-20131115|2399_1 16 IGLPFNVKHAVHVKPDATSE-LGfsGLPSTWESALATSGISKQEVLDNPEEAMTALRFA 73
                9****************884.4556***************************9999885 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.5
                 CCH-XX.XXXXXXXXXXXXXXXXXX CS
  PF00786.23  32 kllkssgissdeqkknpkavlsvvk 56 
                 k++k+  i ++ ++++p+ v  ++ 
  MMETSP1325-20131115|2399_1 143 KEIKDE-IAMQSLNRHPNVVALYEA 166
                 667777.999999999999987765 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.075   2.1e+02       2      76 ..     109     182 ..     108     201 .. 0.78
   2 !   13.9   0.0   1.1e-05     0.029     147     195 ..     205     245 ..     181     247 .. 0.78
   3 ?   -3.1   0.1       1.7   4.7e+03     152     163 ..     331     345 ..     307     371 .. 0.62

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.075
                 EEEEE--SSEEEEEEEETT...TEEEEEESSCCHHHHHHHHHHHHHHHCCSSSB--BEEE..E-CSSCSCEEEEEE- CS
  PF01636.18   2 vrelsgGasnrtyrvttga.g.ryvlrrarparaaeelrrevallrlLakagipvPevlagdtdddvlgllfalley 76 
                 ++++++Gas  +y  t++  g +++l+ ++ +    e++ e a+ + L ++   v +++    ++d + l ++l+++
  MMETSP1325-20131115|2399_1 109 LKKVGAGASGTVYSATQKVsGqKVALKYCSIE-ELKEIKDEIAM-QSLNRH-PNVVALYEAFLTEDKICLSMELMSG 182
                 678999**********999866888*******.99999999884.555666.4466777666777777777777765 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEETTTTEEEE---TT- CS
  PF01636.18 147 eleervlaalaallpgaeppvllHgDlhpgNllvdpddgrvgviDfeda 195
                 +++ + la ++++++       +H+D++++Nllvd  +g+v + Df++a
  MMETSP1325-20131115|2399_1 205 KCALQGLAFIHRNWR-------IHRDIKSDNLLVD-MQGQVKIADFGFA 245
                 566667788888888.......9************.5566659999998 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 1.7
                 HHHHHHHHHHC...S CS
  PF01636.18 152 vlaalaallpg...a 163
                 +l++++a  p+    
  MMETSP1325-20131115|2399_1 331 LLRRCLAKEPKkraL 345
                 555555555554522 PP

>> PF07387.6  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   6.4e-05      0.18     149     188 ..     206     243 ..     188     251 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 6.4e-05
   PF07387.6 149 aglkdLmdfhsestnllhGDcnpenlmcDknGylklvDPv 188
                   l+ L  +h   +  +h D++ +nl+ D  G++k+ D +
  MMETSP1325-20131115|2399_1 206 CALQGLAFIH--RNWRIHRDIKSDNLLVDMQGQVKIADFG 243
                 4578888899..5678********************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.36s 00:00:01.08 Elapsed: 00:00:00.72
# Mc/sec: 1281.39
//
Query:       MMETSP1325-20131115|2402_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|2404_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 261.82
//
Query:       MMETSP1325-20131115|2403_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-47  159.1   1.5    9.8e-47  158.8   1.0    1.0  1  PF01940.11 Integral membrane protein DUF92


Domain annotation for each model (and alignments):
>> PF01940.11  Integral membrane protein DUF92
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.8   1.0   7.2e-51   9.8e-47      71     224 ..       1     201 [.       1     204 [. 0.94

  Alignments for each domain:
  == domain 1    score: 158.8 bits;  conditional E-value: 7.2e-51
  PF01940.11  71 kkggqRgleqVlanglvaallallyalql...........etgasllllgflaslAaalaDTlaSEiGklskkkprlit.tlkkVprGtnGgvsllGtlasllGsllialvavllg.....lisaklilli...tlaGllGslvDSllGAtlqa...........................glgilsNevvNllstligal 224
                 k+ggqRg+ qVla +l a+++a++y++++           + ++s+ll+++l+++A++++DT+aSE+G+l +  prl+t  +++Vp+GtnGg+s++Gt+asl+++l+i++ ++l++     + ++++++l+    ++G+ Gsl+DSllGAtlqa                           g+++lsNe+vN++s+ ++ +
  MMETSP1325-20131115|2403_1   1 KEGGQRGVDQVLACSLLATIIAVVYMASEglddapihfevAPRRSFLLCAYLSHYACCNGDTWASELGVLDPWVPRLVTqPWRSVPKGTNGGMSATGTAASLAAGLFIGAGFWLMSprvvpDGTPSQLPLVwlgGAMGFGGSLLDSLLGATLQAtnydeekkmiasdklhnsnakgitrvcGMEVLSNEAVNAISVAVTTA 201
                 579************************99*********998899***********************************999***********************************9999455555444434699***********************************************************998855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 976.98
//
Query:       MMETSP1325-20131115|2407_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      6e-09   34.0   0.0    6.4e-09   33.9   0.0    1.0  1  PF12722.2 High-temperature-induced dauer-formation protein
  ------ inclusion threshold ------
      0.084   10.8   0.0      0.084   10.8   0.0    1.0  1  PF09742.4 Dyggve-Melchior-Clausen syndrome protein


Domain annotation for each model (and alignments):
>> PF12722.2  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   9.4e-13   6.4e-09     169     228 ..       2      73 .]       1      73 [] 0.85

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 9.4e-13
   PF12722.2 169 LlFiedFTvpssk.........sskskvsy...llWenGigtntslyspnaeldsnRleiLkLLLtlfSedl 228
                 LlF++ FTv+ ++         ++++   +   ++W +Gi + +    ++  +d+nR+e+L+L+L+++ e+l
  MMETSP1325-20131115|2407_1   2 LLFLPSFTVDGNAfeneyeedeQEEDLDVMhpgAVWAPGIIVPDDIIVTSTTYDKNRVEVLRLMLAMLCEPL 73 
                 9*****************9997333333332336********************************998865 PP

>> PF09742.4  Dyggve-Melchior-Clausen syndrome protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   1.2e-05     0.084     173     209 ..      35      72 ..       1      73 [] 0.59

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.2e-05
   PF09742.4 173 kilealvgllvsppv.ndatdkirteilkllltllssq 209
                  +++ ++ + +++ v ++  dk+r+e+l+l+l++l++ 
  MMETSP1325-20131115|2407_1  35 AVWAPGIIVPDDIIVtSTTYDKNRVEVLRLMLAMLCEP 72 
                 4555555555556664455679**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 306.90
//
Query:       MMETSP1325-20131115|2401_1  [L=374]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      389  (0.0284523); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 1723.53
//
Query:       MMETSP1325-20131115|2411_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|2405_1  [L=334]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1090  (0.079725); expected 273.4 (0.02)
Passed bias filter:                      709  (0.0518578); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.56s 00:00:01.14 Elapsed: 00:00:00.50
# Mc/sec: 1600.77
//
Query:       MMETSP1325-20131115|2410_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|2416_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-05   23.9   0.0    3.1e-05   23.3   0.0    1.2  1  PF00850.14 Histone deacetylase domain


Domain annotation for each model (and alignments):
>> PF00850.14  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   2.3e-09   3.1e-05     256     292 ..      14      52 ..       7      61 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 2.3e-09
                 ---B-----HHHHHHHHHHH..H----EEEB------TT CS
  PF00850.14 256 rlnlteegyaeltrdllela..lakgkvvlvleGGYnle 292
                 +l+l++e+++++t +l+++a   ++g+vv+vleGGY + 
  MMETSP1325-20131115|2416_1  14 GLDLRPEDFHWITCQLRQVAevTCNGRVVSVLEGGYGQP 52 
                 6899*****************99*************765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.46s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1071.31
//
Query:       MMETSP1325-20131115|2417_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-16   60.5   0.1    1.9e-16   59.9   0.0    1.5  1  PF01926.18 50S ribosome-binding GTPase
    3.5e-09   36.0   0.0    6.5e-09   35.1   0.0    1.5  1  PF02421.13 Ferrous iron transport protein B
    1.6e-05   24.6   0.1     0.0043   16.7   0.0    2.3  2  PF00350.18 Dynamin family
      0.005   17.2   0.1      0.016   15.5   0.0    1.9  2  PF08477.8  Miro-like protein
  ------ inclusion threshold ------
       0.01   14.8   0.0      0.015   14.2   0.0    1.3  1  PF04548.11 AIG1 family
      0.044   13.2   0.0      0.068   12.5   0.0    1.3  1  PF08459.6  UvrC Helix-hairpin-helix N-terminal


Domain annotation for each model (and alignments):
>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   0.0   8.1e-20   1.9e-16       1     102 [.       2     103 ..       2     190 .. 0.84

  Alignments for each domain:
  == domain 1    score: 59.9 bits;  conditional E-value: 8.1e-20
                 EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE..ETTEEEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS.HHHHHHHHHHHHH CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev..kkekiilvDtPGiiegasedkeiegikkylekveradvlllvvdasa.vlkeadkellnel 102
                 +va++G p vGKS+L+   t+  ++  ++y +tT++ + +++  + +ki+l+D+PGiiega+++k   + k+++  +++ad++l+v+d  + + +++ + l nel
  MMETSP1325-20131115|2417_1   2 RVAMIGFPSVGKSSLLSEVTET-KSLCAAYEFTTLTCIPGNLmyNGTKIQLLDLPGIIEGAAHGKG--RGKEVISVAKTADLILMVLDGGKeQVNRHREILENEL 103
                 699*****************75.77************8877654444688*************994..567789999***********55523333444444455 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   2.9e-12   6.5e-09       2      89 ..       2      88 ..       1     106 [. 0.86

  Alignments for each domain:
  == domain 1    score: 35.1 bits;  conditional E-value: 2.9e-12
                EEEEE--TT---HHHHHHH----TB--------S--BB--EEETTEEEEEEE------SSSSSHHHHHHHHHHH.HH--SEEEEEEEGG CS
  PF02421.13  2 tvalvGnpnvGKttlfnaltgakqkvgNwpGvTVekkegklklkgkeveivDLPGiYsLsayseeekvardyll.eekpdviinvvDas 89
                +va++G p vGK++l+ ++t++k+  + +  +T     g+l ++g++++++DLPGi      ++ +   ++++   +++d+i+ v+D+ 
  MMETSP1325-20131115|2417_1  2 RVAMIGFPSVGKSSLLSEVTETKSLCAAYEFTTLTCIPGNLMYNGTKIQLLDLPGIIE--GAAHGKGRGKEVISvAKTADLILMVLDGG 88
                69*****************************************************954..55555555666665478889999999875 PP

>> PF00350.18  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0046        11       1      32 [.       3      34 ..       3      39 .. 0.80
   2 !   16.7   0.0   1.9e-06    0.0043     101     158 ..      47     107 ..      41     113 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0046
                EEEE--TT---HHHHHHH-------------- CS
  PF00350.18  1 iavvGsqSaGKSSllnaLlgedilprgpgptT 32
                +a +G  S GKSSll  + + + l    + tT
  MMETSP1325-20131115|2417_1  3 VAMIGFPSVGKSSLLSEVTETKSLCAAYEFTT 34
                6889999********99998887766665555 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 1.9e-06
                 -SEEEEE------------...HHHHHHHSTTEEEEEEEETTS-STT-SHHHHHHHH---- CS
  PF00350.18 101 kgltlvDtPGldsvnkrdq...elveeyikkadiilavtdanhdlstsealflarevdpkg 158
                  ++ l D+PG+ +++++ +   + v + +k ad+il+v d  +++ +  ++ l++e++  g
  MMETSP1325-20131115|2417_1  47 TKIQLLDLPGIIEGAAHGKgrgKEVISVAKTADLILMVLDGGKEQVNRHREILENELETVG 107
                 5799*********9999989999999********************999999999887665 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0     7e-06     0.016       1      86 [.       2      90 ..       2     104 .. 0.64
   2 ?   -2.3   0.0       2.3   5.3e+03      78      95 ..     185     202 ..     167     213 .. 0.66

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 7e-06
   PF08477.8  1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggr.......eelkkehelllkkadaillvydltde 86
                +v+ +G ++vGKsslls++++ +        e+++ t+     ++  ++ +++l dl g        + + ke + + k+ad il+v+d  +e
  MMETSP1325-20131115|2417_1  2 RVAMIGFPSVGKSSLLSEVTETKSL--CAAYEFTTLTCIPG--NLMYNGTKIQLLDLPGIiegaahgKGRGKEVISVAKTADLILMVLDGGKE 90
                7999**************9944444..44444444444433..33333333456777766433343344445555669999999999986655 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 2.3
   PF08477.8  78 llvydltdeesleevsel 95 
                 l vy   d  s+eev++l
  MMETSP1325-20131115|2417_1 185 LYVYNKVDMISIEEVDKL 202
                 345555555666666554 PP

>> PF04548.11  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   6.7e-06     0.015       3      94 ..       3      88 ..       1     106 [. 0.83

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 6.7e-06
                EEEE-------TT---TTTTS--S-----------S-EEEEEEETTEEEEEEE--CGCCTTCHHCCHHHHHHHHHHHH-----EEEEEEE-- CS
  PF04548.11  3 ivlvGktgnGkSaTgNsilgkkaFesklsaqsvtkkcqkksrtwdgkkinViDTPglfdlsvsadkiskeivrclllseegihalllvlslg 94
                + ++G   +GkS+    + ++k        +  t +c   + + +g+ki+  D Pg+++  ++ +   ke++    ++++  + +l+vl+ g
  MMETSP1325-20131115|2417_1  3 VAMIGFPSVGKSSLLSEVTETKSLCAA--YEFTTLTCIPGNLMYNGTKIQLLDLPGIIEGAAHGKGRGKEVIS---VAKT-ADLILMVLDGG 88
                667888889999988888888887776..47788999999*******************************95...5555.89999999765 PP

>> PF08459.6  UvrC Helix-hairpin-helix N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     3e-05     0.068      82     102 ..      82     103 ..      59     132 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3e-05
                 EEE-------HHHHHHHHH.H- CS
   PF08459.6  82 LiliDGGkgqlnaakevle.el 102
                 L+++DGGk q+n  +e+le el
  MMETSP1325-20131115|2417_1  82 LMVLDGGKEQVNRHREILEnEL 103
                 5678**************9444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.43s 00:00:00.94 Elapsed: 00:00:00.57
# Mc/sec: 1008.12
//
Query:       MMETSP1325-20131115|2418_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 433.19
//
Query:       MMETSP1325-20131115|2422_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|2423_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.097   12.3   0.4       0.16   11.6   0.3    1.4  1  PF03475.9 3-alpha domain


Domain annotation for each model (and alignments):
>> PF03475.9  3-alpha domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   1.2e-05      0.16      20      46 ..       6      34 ..       4      35 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.2e-05
   PF03475.9 20 alrrlLaleaLa.psWrkslekR.lesge 46
                + ++lLa+++L+ ps+r+ ++ R +e++e
  MMETSP1325-20131115|2423_1  6 GAHALLACDPLPpPSRRALVAERrIERRE 34
                6789*******735888876555488876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|2412_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.55
# Mc/sec: 893.19
//
Query:       MMETSP1325-20131115|2425_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.053   13.3   0.1      0.082   12.7   0.1    1.3  1  PF10338.4 Protein of unknown function (DUF2423)
      0.067   12.9   0.4       0.34   10.6   0.1    2.3  3  PF12411.3 Choline sulfatase enzyme C terminal


Domain annotation for each model (and alignments):
>> PF10338.4  Protein of unknown function (DUF2423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.2e-05     0.082      11      33 ..      39      61 ..      35      62 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.2e-05
   PF10338.4 11 lraksvkRkgvFakvedaRaeRL 33
                +r+ s+kR++ ++  ed+R +R+
  MMETSP1325-20131115|2425_1 39 MRNYSIKRMERHKELEDQREQRM 61
                7999******************7 PP

>> PF12411.3  Choline sulfatase enzyme C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.27   1.8e+03       3       9 ..      19      25 ..      18      26 .. 0.84
   2 ?   10.6   0.1     5e-05      0.34      28      42 ..      28      42 ..      27      58 .. 0.83
   3 ?   -0.9   0.0       0.2   1.3e+03       5      18 ..      53      66 ..      49      68 .. 0.69

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.27
   PF12411.3  3 dVlasQr 9 
                ++lasQ+
  MMETSP1325-20131115|2425_1 19 EILASQK 25
                79****8 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 5e-05
   PF12411.3 28 yqpliDaserYvRnh 42
                ++ l+D+se+++Rn 
  MMETSP1325-20131115|2425_1 28 FAQLTDVSEQFMRNY 42
                6789*********94 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.2
   PF12411.3  5 lasQrrRrlvysAl 18
                l+ Qr  r+ + A+
  MMETSP1325-20131115|2425_1 53 LEDQREQRMYFTAF 66
                56677777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       923  (0.0675102); expected 273.4 (0.02)
Passed bias filter:                      741  (0.0541984); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.53
# Mc/sec: 361.71
//
Query:       MMETSP1325-20131115|2426_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   13.9   0.5      0.051   13.3   0.4    1.2  1  PF11804.3 Protein of unknown function (DUF3325)


Domain annotation for each model (and alignments):
>> PF11804.3  Protein of unknown function (DUF3325)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.4   3.7e-06     0.051      59      94 ..      20      55 ..      17      61 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.7e-06
   PF11804.3 59 gwavGlvlwlGlltlaalllvlllsyrprllrrlaa 94
                + avG +++lG++ +a+ll+vl+ + +  l ++ aa
  MMETSP1325-20131115|2426_1 20 KGAVGRTMFLGVIGAAVLLVVLVVTIWFWLFPPGAA 55
                569**********************99555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       633  (0.046299); expected 273.4 (0.02)
Passed bias filter:                      541  (0.0395699); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.59
# Mc/sec: 361.48
//
Query:       MMETSP1325-20131115|2427_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.57
# Mc/sec: 785.01
//
Query:       MMETSP1325-20131115|2429_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-20   72.3   3.5    3.4e-20   71.8   2.4    1.2  1  PF04519.8 Polymer-forming cytoskeletal


Domain annotation for each model (and alignments):
>> PF04519.8  Polymer-forming cytoskeletal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   2.4   2.5e-24   3.4e-20       2     100 ..      75     173 ..      74     174 .. 0.95

  Alignments for each domain:
  == domain 1    score: 71.8 bits;  conditional E-value: 2.5e-24
   PF04519.8   2 ktligkgtkieGdiefegelridGkveGnikaegklvigesgkveGeik.aeeviinGeveGnveakekleikstakveGdvkyksleieegaqfeGele 100
                 +t++g +++++G++ fe  lridGkveG++ ++g+l++ge+g++ G+++ ++++ ++G+v Gn+++ ekle++++a+v G++++k+l +++  ++ G+l+
  MMETSP1325-20131115|2429_1  75 ETVVGLNVNVKGELAFETLLRIDGKVEGTLLSKGNLIVGETGVLVGDVNgMQNMLVDGKVIGNISV-EKLELHAKATVMGNITCKTLFMDHSTTVVGTLN 173
                 6899********************************************94579*************.99***********************99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.45s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1000.02
//
Query:       MMETSP1325-20131115|2421_1  [L=794]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-17   63.9   0.1    2.1e-17   63.1   0.0    1.3  1  PF05990.7 Alpha/beta hydrolase of unknown function (DUF900)


Domain annotation for each model (and alignments):
>> PF05990.7  Alpha/beta hydrolase of unknown function (DUF900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.0   1.5e-21   2.1e-17      10     168 ..     514     702 ..     509     711 .. 0.86

  Alignments for each domain:
  == domain 1    score: 63.1 bits;  conditional E-value: 1.5e-21
   PF05990.7  10 akelkksaakeilvfvHGynnsFedavlraaqiaddlknqgaivvfsWPsagklld...............ynyDresaeasrdalekllrylatkks.akkihllaHSmGtwlvlealrqlaieade..............paleakikeviLaApDidvdvfkkqleslgkeskeltvyvsrdDraL 168
                 +k + +  a+e+l +vHG+ ++F +av +aa+ a+  +    +vvf+WPs   l                 y++ ++ ++as + l  l + l++k++ ++++    HSmG++l+l+ +  +                    + +e  +++v+L ApD+    f++ +++  + + +   ++ + D+a 
  MMETSP1325-20131115|2421_1 514 EKIITSTVAEEVLCYVHGFATPFANAVRSAAIYARAFHQSKLVVVFTWPSDPDLHTsswlltkvmsdlernYTHAEQHMHASINSLIYLAKWLRQKAGkQRRVLWHSHSMGNYLLLNCIDRMCWASAGathsspeataakalSIVEYHFSRVLLDAPDVPTWFFEDVINKTCDLGVRYLHIYNKFDQAV 702
                 5566677889******************************************98878999999******************************99965156677789***************8776666899**9999988665666************999999999988888866555556666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.15u 0.39s 00:00:01.54 Elapsed: 00:00:00.65
# Mc/sec: 2927.24
//
Query:       MMETSP1325-20131115|2430_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1124.82
//
Query:       MMETSP1325-20131115|2432_1  [L=500]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-08   34.3   0.0    3.3e-08   33.5   0.0    1.5  1  PF00615.14 Regulator of G protein signaling domain
    1.3e-05   24.7   0.0    3.5e-05   23.3   0.0    1.7  1  PF05527.6  Domain of unknown function (DUF758)


Domain annotation for each model (and alignments):
>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   4.8e-12   3.3e-08       2     116 ..     289     408 ..     288     410 .. 0.88

  Alignments for each domain:
  == domain 1    score: 33.5 bits;  conditional E-value: 4.8e-12
                 HHHHHTSS---HHHHHHHHTTTTH...HHHHHHHHHHHHCTS--HHHHHHHHHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS....--TTTTHHHHHHHHHHHTTHHHHHHHCSHHHH CS
  PF00615.14   2 leslledqpgrslFreFlesefse...enleFwlaveefkkakeqeelskkakeIynkylapsspkelnidkklreeleknleka..qpsrklfeeaqeevfrllekdsypkFlkselyl 116
                 l++ le+++   lF ++l++       +  +F ++v  ++++++++ l k+a+++y++yla+++++++ i++++r+ + ++        +r+ f++a  e +  l++     F+ se+++
  MMETSP1325-20131115|2432_1 289 LRQWLENEQTSTLFSDWLRQAMGPealNLQKFVKQVSYYRSTNNRSLLPKRAEQVYEAYLAEGAQCSIAISDEVRAAVDAKYAGGgkAAQRTDFDAAEVEAKASLNEMFQGGFVGSEQFQ 408
                 7899***************976553656668***********9999********************************999887677788999999999999999998888888888886 PP

>> PF05527.6  Domain of unknown function (DUF758)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   5.2e-09   3.5e-05      50     159 ..     125     232 ..      83     253 .. 0.80

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 5.2e-09
   PF05527.6  50 tknkkeaqkvikdlikiavkigvlyrnnqfseeelklvekfrkklkqlamtavsfyevdftf.dkavlsklltecrdllkelverhltakshgriehvfnhfadaellaal 159
                   + + a+++  dl+k+ +k+ +lyr++ + +e    ++  ++ l  +    +   e d +    a l+++++ec+d +  l++  + ++   r+ +vf+++++ ++l+a 
  MMETSP1325-20131115|2432_1 125 FDSTATAKQLKVDLLKLLLKVLLLYREHIITPEM---AQPAKQPLLIMMDLLIETLEADRSKrSPAELARVMAECHDAVMPLLKPNVREHNWRRLTRVFDFYGNESFLTAF 232
                 356788999999****************999975...455566665555556677777776514578*****************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.43s 00:00:01.28 Elapsed: 00:00:00.57
# Mc/sec: 2065.82
//
Query:       MMETSP1325-20131115|2433_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.3   1.8       0.17   11.2   0.2    1.7  2  PF05676.8 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)


Domain annotation for each model (and alignments):
>> PF05676.8  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.11   1.5e+03      41      50 ..      34      43 ..      17      50 .. 0.65
   2 ?   11.2   0.2   1.2e-05      0.17      40      59 ..      69      88 ..      64      91 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.11
   PF05676.8 41 lkCeherhey 50
                 +C+  +++y
  MMETSP1325-20131115|2433_1 34 GQCKAFKGKY 43
                4566666666 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 1.2e-05
   PF05676.8 40 alkCeherheyekCeyddyv 59
                +l+C + r eye C y+ +v
  MMETSP1325-20131115|2433_1 69 ILECRQRRNEYEPCSYHRHV 88
                689*************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 589.50
//
Query:       MMETSP1325-20131115|2428_1  [L=741]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0012   17.8   0.0     0.0068   15.4   0.0    2.0  2  PF07065.9 D123
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.32   10.7   0.0    1.7  1  PF14243.1 Domain of unknown function (DUF4343)


Domain annotation for each model (and alignments):
>> PF07065.9  D123
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0     0.091   6.2e+02      86     101 ..     135     150 ..     119     160 .. 0.80
   2 !   15.4   0.0   9.9e-07    0.0068     113     240 ..     192     347 ..     175     369 .. 0.76

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.091
   PF07065.9  86 gevfpKlnWsaPkDAa 101
                 g+ f+Kl  ++PkD +
  MMETSP1325-20131115|2428_1 135 GKAFVKLSTRSPKDSK 150
                 568***********87 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 9.9e-07
   PF07065.9 113 elsdvylLLkaSdkiahdleeayeeiedk........................ksaeeee.....syeLvLrkwl.elnpalEFRvFVkekklvgisqRdl.nyyefLkeekeeikea.Ieeffeekilekf..ededyvfDvYiskkfekvlliDfnpfge 240
                 + ++ + LL  Sd + +dle a ++ +                                      ++eLv r w  +l p+ EFR    +  l   +q  +  ++  + + +ee++++ I+++ e +++  +     ++++D    ++  +v++i +npf  
  MMETSP1325-20131115|2428_1 192 NGDEALELLLDSDRVYEDLEYALRGPPGPnaptdgsadqhdagassatvphpaG-----GeatrwNMELVARAWDpRLTPESEFRGIAWNGDLTCLCQYFHpLHFPGMRDRSEEVQRDiISKYNEPEVKSAVdrLGGHCIIDFAWLAP-GEVIVIELNPFDG 347
                 556777788888888888888888765555677777777777766665544432.....0344559*********9**********************9777888889888888876616788888998777545678999*999999.9**********76 PP

>> PF14243.1  Domain of unknown function (DUF4343)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   4.6e-05      0.32      46     115 ..     266     345 ..     260     355 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 4.6e-05
   PF14243.1  46 ieaEwRlfvvdgkvvtaslY........rgepelevdaellaeaaqavaka..aelpeayvlDvgrtedgglkvvEvNcl 115
                  e+E+R +  +g ++++ +Y          +   ev+++++++ ++   k+    l   +++D++   +g++ v+E+N +
  MMETSP1325-20131115|2428_1 266 PESEFRGIAWNGDLTCLCQYfhplhfpgMRDRSEEVQRDIISKYNEPEVKSavDRLGGHCIIDFAWLAPGEVIVIELNPF 345
                 689*********************999866677788888888877754444445778899******************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (741 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.06u 0.33s 00:00:01.39 Elapsed: 00:00:00.60
# Mc/sec: 2959.50
//
Query:       MMETSP1325-20131115|2436_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|2435_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      425  (0.0310854); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 654.01
//
Query:       MMETSP1325-20131115|2431_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     2e-161  536.0   0.1   2.3e-161  535.8   0.0    1.0  1  PF00274.14 Fructose-bisphosphate aldolase class-I
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.31   10.9   0.0    1.7  1  PF09133.5  SANTA (SANT Associated)


Domain annotation for each model (and alignments):
>> PF00274.14  Fructose-bisphosphate aldolase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  535.8   0.0  3.4e-165  2.3e-161       1     348 []      15     366 .]      15     366 .] 0.99

  Alignments for each domain:
  == domain 1    score: 535.8 bits;  conditional E-value: 3.4e-165
  PF00274.14   1 eLietakaivapgkGilAaDestgtigkrlasigventeenrrayRellftteglgeyisgvIlfeetlyqktkdG.kpfvellkekgivpGiKvDkglvplagtagetttqglDglaeRaaeykkaGarFaKwRavlkis...kntpselaieenanvlaryaaicqengLVPIvePeilldgdhdlercqevtekvlaavfkalsdhhVllegtllkpnmvtpGadckkkaspeevaeatvralrrtvPaavpgvvfLSGgqseeeatlnLnainklpkkkpwklsfSygrALqasvlkawkgkkenvkaaqeallkrakanseaslGkyekekeeeaakeslyeksyay 348
                 eLi+ta+ai a gkGilAaDestgtigkr+++i+ven+++nrrayRe+lf+tegl++yisgvIlfeetly+k++dG +++v+llk++gi+pGiKvD+g++pl gt+get+tqg+ +laeR+ +y+++GarFaKwRavl+i+    +tps+l+i++na +laryaaicq+ gLVPIvePe+l+dg+h+le+++ +te+vlaavfk lsdhh+lleg+llkpnmv +G+dc+ +a+pee a atvr+l+ tvP+a+pg++fLSGg+seeea++ L+a+nk+++ kpw+l+fSygrALq+s+lkawkg++env aaqe+l+krakansea++G y ++ + +a+++s+++k+y+y
  MMETSP1325-20131115|2431_1  15 ELIQTARAISATGKGILAADESTGTIGKRFKQIDVENNQDNRRAYREMLFRTEGLNQYISGVILFEETLYDKAADGeTQLVDLLKDQGIIPGIKVDMGVQPLYGTNGETVTQGITKLAERCTKYYQQGARFAKWRAVLHIKdsvGATPSQLSIDQNASTLARYAAICQACGLVPIVEPEVLMDGEHTLEHSAMITERVLAAVFKNLSDHHILLEGCLLKPNMVRSGSDCPVQATPEETALATVRVLQHTVPVALPGITFLSGGMSEEEASVTLDAMNKIDTIKPWSLTFSYGRALQQSCLKAWKGQPENVPAAQEELMKRAKANSEAQQGIYGGGVAGAASEASTFQKNYSY 366
                 8**************************************************************************94579************************************************************9666789*********************************************************************************************************************************************************************************************9************987 PP

>> PF09133.5  SANTA (SANT Associated)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.5e-05      0.31      30      70 ..     202     242 ..     191     248 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4.5e-05
   PF09133.5  30 lftSniIvkrvestvlktvdgriyvlvGkldkekmkksgfs 70 
                 l +S++I++rv + v k+ +   ++l+G l k +m +sg  
  MMETSP1325-20131115|2431_1 202 LEHSAMITERVLAAVFKNLSDHHILLEGCLLKPNMVRSGSD 242
                 569***************************99999999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.57
# Mc/sec: 1512.18
//
Query:       MMETSP1325-20131115|2439_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 423.97
//
Query:       MMETSP1325-20131115|2437_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 1111.04
//
Query:       MMETSP1325-20131115|2440_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-14   53.1   0.0    3.3e-14   52.8   0.0    1.1  1  PF00615.14 Regulator of G protein signaling domain


Domain annotation for each model (and alignments):
>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   2.4e-18   3.3e-14      24     118 .]       4     113 ..       1     113 [. 0.93

  Alignments for each domain:
  == domain 1    score: 52.8 bits;  conditional E-value: 2.4e-18
                 THHHHHHHHHHHHHCTS...--HHHHHHHHHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS..............--TTTTHHHHHHHHHHHTTHHHHHHHCSHHHHHH CS
  PF00615.14  24 seenleFwlaveefkka...keqeelskkakeIynkylapsspkelnidkklreeleknleka............qpsrklfeeaqeevfrllekdsypkFlkselylrl 118
                 ++en++F++    + ++   +++    ++a+++y++y+a+++p+++ni++++ +++++ +  +             p r+lf  a +e ++l+ekd +++F+k + +++l
  MMETSP1325-20131115|2440_1   4 ASENIHFYDRSLSYLAKydsRTDAANLAEAQSLYRTYIASDAPEQVNIPQSMLNTCRNIVLAEdheahavapdfrFPPRDLFGPATTEALKLMEKDNFRRFIKAPAFTQL 113
                 689******99999998876677778888*******************************9999**********9999*****************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 800.49
//
Query:       MMETSP1325-20131115|2438_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-12   45.2   4.0    3.1e-11   42.7   2.8    1.9  1  PF00722.16 Glycosyl hydrolases family 16
    0.00026   20.8   0.1    0.00055   19.7   0.1    1.4  1  PF06439.6  Domain of Unknown Function (DUF1080)


Domain annotation for each model (and alignments):
>> PF00722.16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   2.8   4.6e-15   3.1e-11      22     164 ..       6     173 ..       2     192 .. 0.78

  Alignments for each domain:
  == domain 1    score: 42.7 bits;  conditional E-value: 4.6e-15
                 EEEEEEEEE..............TCEEEEEEEEESSEEEE-EEEEEEE..-------EEEEEE..E-.TTT----EEEEEEEE---TTE............EEEEEE--------.--EEEE-SS-TTTS-EEEEEEEETTEEEEEETTEEEEEEECSHHHGGGS-EECEEEEEE CS
  PF00722.16  22 ltltldkes..............kveytsgglkskksylyGkvearik..aakgaGvvtafwl..ss.edewdqhdEIDiEflGndtgk............vqtnvygngkggrt.gekrlelwfdptedfHtYaieWtpdkitwyVDgepvrtvkkkeaeeakyPqytpmnlav 164
                 lt+t++k+               +   +sg+l+s++++ +G++ ++ k  +++gaG   a      + ed  ++++ I i + G   +             +q+++y +g+ +++  +   +   + +++f+ Y+++Wt+d++t  V++++vr+v++++     +Pq +p+++++
  MMETSP1325-20131115|2438_1   6 LTITTTKKDdsfdycttdddedvQAGGSSGKLTSSFYVSFGTIRVKSKyfPTSGAGDEIATAKgfVGlED--SSSGAITITIHGDGADPsgapknadwtkyMQSSIYQHGDDHNKeFTDLASAVDSVADEFNWYEVNWTSDSVTISVNDVVVREVTNSDL----IPQ-SPLKVQL 173
                 5555555446666666666677778889********************9877777754444443244344..78888888777664444448999999*************99754444555588999******************************86....799.9999986 PP

>> PF06439.6  Domain of Unknown Function (DUF1080)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   8.1e-08   0.00055     101     179 ..     102     180 ..      76     183 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 8.1e-08
                 TTTSTTSBTTT...B-.....-SS---------EEEEEEE----EE.--TTS--EEE-TTSHHHHHH----B--------EEE CS
   PF06439.6 101 anrstGslyde...eskqvk.pkakaakppgeWntyeiivkgdrvtvwlNGvlvldftdldaetekgkkgpIaLqdhgaeveF 179
                 +++   s+y+     +k+ +  +  ++  ++e+n ye+ ++ d+vt+ +N+v+v ++t++d      ++ p+ +q h+  + +
  MMETSP1325-20131115|2438_1 102 TKYMQSSIYQHgddHNKEFTdLASAVDSVADEFNWYEVNWTSDSVTISVNDVVVREVTNSDLI----PQSPLKVQLHSRSIAY 180
                 444555666555442222223567888999********************************8....899*****99987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 930.89
//
Query:       MMETSP1325-20131115|2434_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 221.20
//
Query:       MMETSP1325-20131115|2443_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|2444_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       82  (0.00599766); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 261.82
//
Query:       MMETSP1325-20131115|2442_1  [L=376]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-13   50.0   0.2    5.1e-13   49.3   0.1    1.3  1  PF03372.18 Endonuclease/Exonuclease/phosphatase family
  ------ inclusion threshold ------
       0.29    8.8   1.2        0.4    8.3   0.9    1.1  1  PF05642.6  Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> PF03372.18  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.1   7.5e-17   5.1e-13       1     228 [.      54     361 ..      54     373 .. 0.62

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 7.5e-17
                 EEEEECE...........................................CGTHCH..HHHHHHTCG-SEEEEECC-TCHHHHHHC.HHCTTT-EEEE--------SEEEECTEEEEEEESCGCCEEEEEECTTS.........................S-ECGGCEECCTCEEEEEEEEEECTEEEEEEECHHHC.........TSSTTSHHHHHHHHHHHHHHCCHHHH..........................SEEEE---S--BSSGH....TTTBHHHHHSHHCBHBCCHHHHCBTT-C.--SB--TC-TTTCCCHHB..................--S--EE CS
  PF03372.18   1 ltwNvlg....wnarsdr................................akkldq..ladllqsedpDvllLQEvdedplsella.tglasglglagdgkvggggggdalgggglallskypldksirrtfqld.........................gkagiavprlssknkgdvpvrfrggktlalvntHltp.........gnrlrqrderallaeidkladdsrgs..........................pvilaGDfNsrpdspd....kgfrenaadflpgdgfddglrallphll.lptspgttdtyekagepa..................rlDyilv 228
                 +t+Nv++    + +r+++                                a++ ++  la+l ++  +Dv++LQEv++     +   + l++ +    d  vg          +g+++l++++l ++ r +   +                         g                      +     + ++Hl +         + r ++ + + +++ +++ + +sr s                          + il+GDfN+    +d     ++r  ++++++ ++ d ++ ++++ ++ +p+++ t+    + +++                   r D+++ 
  MMETSP1325-20131115|2442_1  54 VTFNVWFgqlgNAERFEAlialvgtaaaatttaaaaaaaattttttvaprASNAHRspLAALARD--ADVICLQEVTPPFAVAMRSsQLLNAKYS-ISDNEVG---------RYGCMILARHELGATYREVEMPTqmgrylivatfappgqgdspwawcaG--------------------A-A-----VATVHLESlarahvsstHCRAWNVRIQSFVHSLSAPICHSRFSrahatrcsqlreqqltvanttlknfpNAILCGDFNF----DDkqeyGDWRRKYGGPQRNAPRDPATLENNVLARrIPDFVDTWAALNPTDPGKtfdgrtnpvcvsdrdeqmRYDRVML 361
                 599****8888555555566666666666677777777788888888885333333678887776..**********885555555344444454.5555554.........478*******888777777744455555554444443333332222221....................1.1.....5555544444444555566666677777777777777777766777777777777778888888888888********3....334677777777777776666666666665555555555555555555444444455555555566666668888876 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.9   5.8e-05       0.4     270     318 ..      76     123 ..      64     147 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 5.8e-05
   PF05642.6 270 vgaatssssttspssstttttpassgpsaqgshgsssrnavtrstdsis 318
                 vg+a+++++t++++++++ttt+++ +p a+ +h  s+ +a +r++d i+
  MMETSP1325-20131115|2442_1  76 VGTAAAATTTAAAAAAAATTTTTTVAPRASNAH-RSPLAALARDADVIC 123
                 788888888888889999999999999998887.578999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       583  (0.0426419); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.37s 00:00:01.08 Elapsed: 00:00:00.50
# Mc/sec: 1802.06
//
Query:       MMETSP1325-20131115|2446_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-05   24.1  11.3    4.2e-05   23.1   7.8    1.5  1  PF12773.2  Double zinc ribbon
    2.9e-05   22.9  14.2     0.0006   18.7   0.8    2.5  2  PF00641.13 Zn-finger in Ran binding protein and others
    0.00013   20.9  12.9     0.0079   15.2   0.6    2.2  2  PF13248.1  zinc-ribbon domain
  ------ inclusion threshold ------
      0.012   14.9  12.6       0.23   10.8   0.2    2.3  2  PF13240.1  zinc-ribbon domain
        1.2    8.5  13.7          1    8.8   0.5    3.1  3  PF04810.10 Sec23/Sec24 zinc finger
        3.7    7.0  15.3        1.2    8.6   7.2    2.4  2  PF14445.1  Prokaryotic RING finger family 2
        4.9    6.7  14.1      0.074   12.5   1.5    2.6  2  PF07699.8  GCC2 and GCC3


Domain annotation for each model (and alignments):
>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   7.8   2.2e-08   4.2e-05       1      49 [.      32      95 ..      32      95 .. 0.93

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 2.2e-08
   PF12773.2  1 CpqCgaenpsgarfCpqCgaklk................eataeevlCpsCgesvspkarfCpnC 49
                Cp+C  +n s+a  C+ Cg   +                +a     +C+sCg++++ + + C +C
  MMETSP1325-20131115|2446_1 32 CPRCTYNNRSDAASCEMCGMAGPkpkapkapslggkkkgGAGG-DWTCMSCGSQNKGGCATCAYC 95
                *********************999************9973333.578****************** PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.8   3.1e-07    0.0006       6      25 ..      31      50 ..      27      56 .. 0.93
   2 !    9.1   4.1   0.00031      0.61       3      16 ..      74      87 ..      72      95 .. 0.81

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 3.1e-07
  PF00641.13  6 dCskClvqNfawstkCvaCq 25
                +C+ C+++N++ +  C++C+
  MMETSP1325-20131115|2446_1 31 ICPRCTYNNRSDAASCEMCG 50
                6******************7 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00031
  PF00641.13  3 gdWdCskClvqNfa 16
                gdW+C +C+ qN+ 
  MMETSP1325-20131115|2446_1 74 GDWTCMSCGSQNKG 87
                6***********85 PP

>> PF13248.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.6   4.1e-06    0.0079       4      23 ..      31      50 ..      29      52 .. 0.93
   2 !   10.6   3.6   0.00012      0.23       3      22 ..      76      95 ..      74      95 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 4.1e-06
   PF13248.1  4 tCPnCGavlevdakFCpnCG 23
                 CP C +++ +da+ C  CG
  MMETSP1325-20131115|2446_1 31 ICPRCTYNNRSDAASCEMCG 50
                6******99*********** PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00012
   PF13248.1  3 vtCPnCGavlevdakFCpnC 22
                +tC +CG +++ + + C++C
  MMETSP1325-20131115|2446_1 76 WTCMSCGSQNKGGCATCAYC 95
                69******88********** PP

>> PF13240.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00012      0.23       2      20 ..      32      50 ..      31      52 .. 0.95
   2 ?    7.6   4.7    0.0012       2.4       2      19 ..      78      95 ..      77      95 .. 0.97

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00012
   PF13240.1  2 CPkCGaeledgakFCpyCG 20
                CP C   ++ +a  C+ CG
  MMETSP1325-20131115|2446_1 32 CPRCTYNNRSDAASCEMCG 50
                ******************9 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0012
   PF13240.1  2 CPkCGaeledgakFCpyC 19
                C  CG +++ g  +C yC
  MMETSP1325-20131115|2446_1 78 CMSCGSQNKGGCATCAYC 95
                99**************** PP

>> PF04810.10  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.5   0.00053         1      12      33 ..      31      52 ..      30      58 .. 0.89
   2 ?    6.8   0.5    0.0022       4.3      22      35 ..      73      86 ..      71      88 .. 0.87
   3 ?    1.4   0.4      0.11   2.1e+02      25      35 ..      90     100 ..      86     105 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00053
  PF04810.10 12 lNPfcqfdeggkrWtCnlCgtr 33
                ++P c+ ++++    C +Cg++
  MMETSP1325-20131115|2446_1 31 ICPRCTYNNRSDAASCEMCGMA 52
                89*****************986 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0022
  PF04810.10 22 gkrWtCnlCgtrNe 35
                g  WtC  Cg+ N+
  MMETSP1325-20131115|2446_1 73 GGDWTCMSCGSQNK 86
                677********995 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.11
  PF04810.10  25 WtCnlCgtrNe 35 
                  tC  C++ N 
  MMETSP1325-20131115|2446_1  90 ATCAYCFHLNT 100
                 58999999874 PP

>> PF14445.1  Prokaryotic RING finger family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   1.4      0.13   2.5e+02       8      14 ..      44      50 ..      22      56 .. 0.59
   2 ?    8.6   7.2    0.0006       1.2       8      51 ..      44      96 ..      37     102 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.13
   PF14445.1  8 geCdlCr 14
                  C++C 
  MMETSP1325-20131115|2446_1 44 ASCEMCG 50
                2333333 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0006
   PF14445.1  8 geCdlCrtsae.........laelrqCvlCgrwqCaaCWddeygvCkrCggvi 51
                  C++C  +++         l + ++ +  g w C +C   + g C+ C+   
  MMETSP1325-20131115|2446_1 44 ASCEMCGMAGPkpkapkapsLGGKKKGGAGGDWTCMSCGSQNKGGCATCAYCF 96
                578888877766655544445667888999*******************9765 PP

>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.5   3.8e-05     0.074      14      32 ..      32      50 ..      30      59 .. 0.93
   2 ?    2.0   0.1     0.071   1.4e+02      24      34 ..      74      84 ..      69      88 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.8e-05
   PF07699.8 14 CprGtYkneegqkkCiaCp 32
                Cpr tY n++   +C++C+
  MMETSP1325-20131115|2446_1 32 CPRCTYNNRSDAASCEMCG 50
                ******************8 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.071
   PF07699.8 24 gqkkCiaCppg 34
                g+ +C +C+++
  MMETSP1325-20131115|2446_1 74 GDWTCMSCGSQ 84
                55599999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 521.56
//
Query:       MMETSP1325-20131115|2447_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|2448_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 611.32
//
Query:       MMETSP1325-20131115|2449_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 914.53
//
Query:       MMETSP1325-20131115|2450_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   14.4   0.2      0.039   13.5   0.0    1.6  2  PF10725.4 Protein of unknown function (DUF2517)


Domain annotation for each model (and alignments):
>> PF10725.4  Protein of unknown function (DUF2517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.19   2.6e+03       4      15 ..       5      16 ..       2      25 .. 0.65
   2 ?   13.5   0.0   2.8e-06     0.039      16      34 ..      43      61 ..      37      70 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.19
   PF10725.4  4 eyplfkillRRi 15
                ++p+ ++++ R 
  MMETSP1325-20131115|2450_1  5 HFPQVEVTVMRL 16
                567777766664 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 2.8e-06
   PF10725.4 16 avvlvGvlalPvllfrkdR 34
                a+vl+G++a+ v+lfr  R
  MMETSP1325-20131115|2450_1 43 AMVLAGLIAFNVMLFRAIR 61
                579************9766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 371.20
//
Query:       MMETSP1325-20131115|2453_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0093   15.8   0.8        1.9    8.6   0.2    2.6  2  PF13516.1 Leucine Rich repeat
  ------ inclusion threshold ------
      0.043   13.3   0.1        2.3    7.8   0.1    2.3  2  PF12799.2 Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0039        26       1      24 []      10      34 ..      10      34 .. 0.92
   2 !    8.6   0.2   0.00028       1.9       1      20 [.      36      56 ..      36      60 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0039
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLan 24
                ++nL  L + n++ i+d  + a+an
  MMETSP1325-20131115|2453_1 10 CPNLARLGMENCPkISDVSIIAIAN 34
                9***********88***99999986 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00028
   PF13516.1  1 lknLtsLdLsnNq.igdeGls 20
                ++nL  L+++n++ i+d+ + 
  MMETSP1325-20131115|2453_1 36 CTNLAQLCIGNCPqISDKAIN 56
                99**********77**98765 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0   0.00042       2.9      21      40 ..       7      28 ..       2      34 .. 0.79
   2 ?    7.8   0.1   0.00033       2.3       2      38 ..      12      52 ..      11      60 .. 0.64

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00042
   PF12799.2 21 an.LpnLktLnLsnNp.isdls 40
                an +pnL  L ++n+p isd+s
  MMETSP1325-20131115|2453_1  7 ANwCPNLARLGMENCPkISDVS 28
                56469**********66**976 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.00033
   PF12799.2  2 nLevLdLsnN.nIkdlp..pela.nLpnLktLnLsnNp.isd 38
                nL  L   n+ +I+d++  + +a +++nL +L + n+p isd
  MMETSP1325-20131115|2453_1 12 NLARLGMENCpKISDVSiiA-IAnSCTNLAQLCIGNCPqISD 52
                66666666664588766224.543589999999999954777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 932.87
//
Query:       MMETSP1325-20131115|2455_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-20   70.3   5.7      9e-20   70.2   4.0    1.0  1  PF02460.13 Patched family


Domain annotation for each model (and alignments):
>> PF02460.13  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   4.0   6.6e-24     9e-20     708     802 ..       2      95 ..       1      96 [. 0.97

  Alignments for each domain:
  == domain 1    score: 70.2 bits;  conditional E-value: 6.6e-24
  PF02460.13 708 iimsiGFsvDlsaHiayhfvrsegdetakeRvadalealgwPvvqaalSTilcvlvLlfvdsymvevFvKtvvLvvvlgllHGLiflPilLslfd 802
                 ++ms+G svD+  Hi +++++  g +t+ e++ + ++ +g  v+++a+ T+l+vlvL    s + ++F+K ++ +v+ g++HGL+f PilL+++d
  MMETSP1325-20131115|2455_1   2 LVMSVGLSVDYCVHICHGYIHGGG-TTPVEKMEAGIKMMGAAVLKGASTTFLGVLVLSGASSAIFRMFFKLLFGTVLCGVVHGLFFAPILLMALD 95 
                 69********************99.5******************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.41s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 560.75
//
Query:       MMETSP1325-20131115|2452_1  [L=684]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.097   11.4   0.0       0.14   10.9   0.0    1.1  1  PF02450.10 Lecithin:cholesterol acyltransferase


Domain annotation for each model (and alignments):
>> PF02450.10  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     1e-05      0.14     114     165 ..      50     114 ..      47     123 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1e-05
  PF02450.10 114 lkls.gkkvvLiaHSmGnllvlyfLkwveaei.........W...vdqhikafislgapllGsvk 165
                 +++s +++v +i+HS G++ ++  L+ + +           W       + ++  + +pl G++ 
  MMETSP1325-20131115|2452_1  50 HDWSaESPVHMIGHSYGGNTIRKLLELLTVGHpalcdengrWprpSSAWVRSITCINTPLNGAPL 114
                 8899899******************9997777889999999622255678999999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (684 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.99u 0.38s 00:00:01.37 Elapsed: 00:00:00.62
# Mc/sec: 2643.72
//
Query:       MMETSP1325-20131115|2457_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-09   36.7   4.6    2.9e-09   36.2   3.2    1.3  1  PF02213.11 GYF domain
     0.0085   14.1   2.6     0.0086   14.1   1.8    1.0  1  PF03154.10 Atrophin-1 family
  ------ inclusion threshold ------
      0.024   13.3   5.3      0.026   13.1   3.6    1.0  1  PF04712.7  Radial spokehead-like protein
        4.8    5.4   9.2        4.9    5.3   6.4    1.0  1  PF03344.10 Daxx Family
        6.8    5.3   7.7        8.2    5.1   5.4    1.1  1  PF12127.3  SigmaW regulon antibacterial
        9.1    4.3   9.2        9.6    4.2   6.4    1.0  1  PF05262.6  Borrelia P83/100 protein


Domain annotation for each model (and alignments):
>> PF02213.11  GYF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   3.2   1.3e-12   2.9e-09       1      35 [.      64      98 ..      64      99 .] 0.92

  Alignments for each domain:
  == domain 1    score: 36.2 bits;  conditional E-value: 1.3e-12
                --EEEE-----EE-EE-HHHHHHHHTTTSS-S--E CS
  PF02213.11  1 sqWeYkdpqgkiqGPFsseeMqsWykegYFqpslq 35
                s W++ d qg+ qGP+ + +Mq W++++YF+   +
  MMETSP1325-20131115|2457_1 64 SCWFFQDMQGNNQGPYIGPQMQLWFQSNYFNGATM 98
                57****************************98765 PP

>> PF03154.10  Atrophin-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   1.8   3.8e-06    0.0086     601     667 ..       2      82 ..       1      95 [. 0.53

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.8e-06
  PF03154.10 601 eererekekek.....erererereaeraa.........kasssshesrlseaqlsaaahlras.feqppttiaavppyiGp 667
                 eerere+eke+     e e e e eaer            a + ++ + +se +l+a a + +s +           pyiGp
  MMETSP1325-20131115|2457_1   2 EEREREREKERqqeaaEDEAEAEAEAERREveevarqdqEAVAEAKFQEVSE-SLNAKANVVPScWFFQDMQGNNQGPYIGP 82 
                 6777777777643444455555555555547777775544444444444444.34444455554222222333445566666 PP

>> PF04712.7  Radial spokehead-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   3.6   1.1e-05     0.026     358     430 ..       3      98 ..       1      99 [] 0.67

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.1e-05
   PF04712.7 358 eeeeeeeeeedeeeeeeeeeeepEegpelLtpiseDaeleeak..................paWtlrlsssesk.....kervvvlrslvWPGavt 430
                 e e+e e+e ++e++e+e e e E ++   +++++ ++   a+                  ++W ++ ++ +++      +  ++ +s++ +Ga+ 
  MMETSP1325-20131115|2457_1   3 EREREREKERQQEAAEDEAEAEAEAERREVEEVARQDQEAVAEakfqevseslnakanvvpSCWFFQDMQGNNQgpyigPQMQLWFQSNYFNGATM 98 
                 45556666666777777777777777777777765533332222355555566666677889******998777789987778999*******986 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   6.4    0.0022       4.9     451     504 ..       5      58 ..       1      81 [. 0.46

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0022
  PF03344.10 451 eeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedee 504
                 e + eke ++++ e+e e e+e e  e ++   +d ea +e + ++ +e+ +++
  MMETSP1325-20131115|2457_1   5 EREREKERQQEAAEDEAEAEAEAERREVEEVARQDQEAVAEAKFQEVSESLNAK 58 
                 222223333333333333444444444444444444444444444444444444 PP

>> PF12127.3  SigmaW regulon antibacterial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.4    0.0036       8.2     233     278 ..      14      61 ..       8      70 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0036
   PF12127.3 233 dqaeadkrvaqakaeerramavak.eqemkakveemra.kvveaeaev 278
                 ++a  d+  a+a+ae+r+ + va+ +qe++a+++ +++ + ++a+a+v
  MMETSP1325-20131115|2457_1  14 QEAAEDEAEAEAEAERREVEEVARqDQEAVAEAKFQEVsESLNAKANV 61 
                 45666888899************7369998887654431567777775 PP

>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   6.4    0.0042       9.6     285     337 ..       6      55 ..       1      76 [. 0.45

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0042
   PF05262.6 285 kaqkeikkkdeeakkakdakaedlkkeskaeekeaedkeleakkereevaeDl 337
                 +  +e ++++e a+   +a+ae  ++e+ +  ++  d+e+ a+ + +ev+e l
  MMETSP1325-20131115|2457_1   6 R-EREKERQQEAAEDEAEAEAEAERREVEEVARQ--DQEAVAEAKFQEVSESL 55 
                 2.22333444444444444444444444443333..44444444555555532 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1764  (0.129023); expected 273.4 (0.02)
Passed bias filter:                     1148  (0.0839672); expected 273.4 (0.02)
Passed Vit filter:                       241  (0.0176273); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.53s 00:00:01.06 Elapsed: 00:00:00.57
# Mc/sec: 409.03
//
Query:       MMETSP1325-20131115|2460_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 254.31
//
Query:       MMETSP1325-20131115|2458_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-31  108.8   0.0    3.1e-31  108.6   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.6   0.0   2.3e-35   3.1e-31     165     308 ..      11     146 ..       2     153 .. 0.92

  Alignments for each domain:
  == domain 1    score: 108.6 bits;  conditional E-value: 2.3e-35
                 HHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--.-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHH CS
  PF00632.20 165 kkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrksededrLPtasTCfnyLkLpdYsskeilkekLltAiee 308
                 +  lea+++Gfs++   ++l+lf++ el +++cG++  i++ +l + ++++g yn  s+t   l ei+  ++++er++f+ F+T+s+ lP+g       k+ti  +s   +rLP a+TCf +L+Lp+Y++k++lkek+  ++ +
  MMETSP1325-20131115|2458_1  11 RARLEAMQRGFSDYPTLSHLRLFSVFELTSVVCGNQV-ITAHELVAKLNIRGFYN--SDTPAHLREIVCAMTNDERQRFVSFITASTVLPPGEQ-----KITITHVSWGPERLPLAHTCFDRLDLPEYDDKDVLKEKIMWCLDN 146
                 6789*********************************.*************9999..89999*****************************543.....899999998899**************************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 790.29
//
Query:       MMETSP1325-20131115|2459_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.8e-32  111.7   0.0      3e-32  111.6   0.0    1.0  1  PF12775.2 P-loop containing dynein motor region D3


Domain annotation for each model (and alignments):
>> PF12775.2  P-loop containing dynein motor region D3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.6   0.0   2.2e-36     3e-32      40     241 ..       2     207 ..       1     208 [] 0.93

  Alignments for each domain:
  == domain 1    score: 111.6 bits;  conditional E-value: 2.2e-36
   PF12775.2  40 gnagtgksvlvgdklesldedaylvknvpfnyyttsamlqavlekplekkagrnygppgtkklvyfiddmnmpevdaygtvqphtlirqhldykh..wydrskl.tlkeihnvqyvscmn.ptagsftinsrlqrhfsvfalsfpgqdalstiynsiltqhlalrsvsaalqklsptlvaaalalhkkiaatflptaikfhyvfnl 241
                 g agt k+      l + d+ + lvk v f   tt    q+ +e  lek+ g+ +gppg++ +  f+dd+ mpe++a+g      l+r  ++ +   + d++k   lk  ++ qy++ m+ p  g   i +rl+r f +f l +p   ++  iy  +l   +   ++s a  ++ ++l a++++l k     +lpt  kfhy+fn+
  MMETSP1325-20131115|2459_1   2 GGAGTAKTSTALMFLGKQDPTKMLVKRVNFSSATTPFGAQQSIEVELEKRGGKSFGPPGNRAMTVFMDDVSMPEINAWGDQPTLELVRLIVEQGGfaFLDKDKRgELKICEDLQYIAAMQhPGGGKNDIPNRLKRNFFIFNLVLPSIVSINDIYGQMLKGRFPAADFSEAAAEVLSKLTAVTIQLWKSCKDKLLPTPAKFHYIFNM 207
                 7789999888888899999************************************************************99889999999998752257887762699999*******96489999*******************************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 940.46
//
Query:       MMETSP1325-20131115|2462_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-07   28.3   0.7    1.3e-06   27.2   0.5    1.7  1  PF00036.27 EF hand
    4.6e-05   22.8   1.3    0.00025   20.5   0.9    2.1  1  PF13405.1  EF-hand domain
    6.4e-05   21.9   0.8    0.00012   21.1   0.6    1.5  1  PF13202.1  EF hand
    0.00017   20.9   0.6    0.00035   20.0   0.4    1.5  1  PF13833.1  EF-hand domain pair
     0.0021   18.0   1.1     0.0044   17.0   0.3    1.5  1  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.5   4.6e-10   1.3e-06       3      27 ..       3      27 ..       1      29 [. 0.89

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 4.6e-10
                HHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkealk 27
                + + ++fD D++G ++f+Efk++ +
  MMETSP1325-20131115|2462_1  3 QGMLNKFDADKNGELDFDEFKHFAR 27
                6699*****************9976 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.9   9.3e-08   0.00025       7      27 ..       7      27 ..       3      51 .. 0.92

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 9.3e-08
                GCC-------B---HHHHHHH CS
   PF13405.1  7 klfDkdgdGkidaeELrdaLr 27
                ++fD d++G++d++E++++ r
  MMETSP1325-20131115|2462_1  7 NKFDADKNGELDFDEFKHFAR 27
                79***************9987 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.6   4.4e-08   0.00012       5      24 ..       6      25 ..       2      26 .. 0.90

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 4.4e-08
                HHHH--S----B-HHHHHHH CS
   PF13202.1  5 FrafDlNgDGkIsreELkrl 24
                +++fD+++ G ++++E+k +
  MMETSP1325-20131115|2462_1  6 LNKFDADKNGELDFDEFKHF 25
                799***************87 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.4   1.3e-07   0.00035      28      49 ..       3      24 ..       1      28 [. 0.88

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 1.3e-07
   PF13833.1 28 dilfrefDtdgdGkisfeEFcv 49
                + ++++fD+d++G ++f+EF+ 
  MMETSP1325-20131115|2462_1  3 QGMLNKFDADKNGELDFDEFKH 24
                669*****************85 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.3   1.6e-06    0.0044      43      65 ..       3      25 ..       1      26 [. 0.87

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.6e-06
   PF13499.1 43 dyifkelDkngdGvlsfeEflqa 65
                +  ++++D +++G l+f+Ef ++
  MMETSP1325-20131115|2462_1  3 QGMLNKFDADKNGELDFDEFKHF 25
                66799***************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       883  (0.0645846); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 406.93
//
Query:       MMETSP1325-20131115|2463_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|2465_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.85
# Mc/sec: 327.03
//
Query:       MMETSP1325-20131115|2466_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-09   35.1   5.1       0.53   10.3   0.1    4.2  4  PF13516.1  Leucine Rich repeat
    1.9e-06   27.0   1.8        1.6    8.9   0.2    4.1  3  PF00560.28 Leucine Rich Repeat
    0.00027   20.3   0.1       0.35   10.4   0.0    3.1  3  PF12799.2  Leucine Rich repeats (2 copies)
    0.00064   19.3   0.1       0.56    9.9   0.1    2.4  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.015   15.2   0.4         22    5.7   0.0    3.7  3  PF13504.1  Leucine rich repeat
        0.2   11.6   1.8         16    5.4   0.1    2.4  2  PF02410.10 Oligomerisation domain
        0.4   10.1   4.5        6.6    6.2   0.2    2.6  3  PF04528.8  Adenovirus early E4 34 kDa protein conserved region


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.1   0.00027      0.53       1      23 [.       8      31 ..       8      32 .. 0.90
   2 ?    5.4   0.0     0.011        21       1      23 [.      34      57 ..      34      58 .. 0.89
   3 !    9.1   0.0   0.00067       1.3       1      23 [.      60      83 ..      60      84 .. 0.89
   4 !   10.1   0.0   0.00033      0.64       1      23 [.      86     109 ..      86     110 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00027
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + nLt++dL n++ ++d  + aLa
  MMETSP1325-20131115|2466_1  8 CANLTTIDLVNCDnLTDAAVIALA 31
                77*********976****999998 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.011
   PF13516.1  1 lknLtsLdLsn.NqigdeGlsaLa 23
                + n+t + Ls+ ++++d  + aLa
  MMETSP1325-20131115|2466_1 34 CANITAIYLSGwTNLSDATVIALA 57
                779999***977*******99998 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.00067
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + n+t++ L+++  ++d  + aLa
  MMETSP1325-20131115|2466_1 60 CANITTIYLGRCSnLTDTAVIALA 83
                779********955****999998 PP

  == domain 4    score: 10.1 bits;  conditional E-value: 0.00033
   PF13516.1   1 lknLtsLdLsnNq.igdeGlsaLa 23 
                 + nLt+  L+++  ++d  + aLa
  MMETSP1325-20131115|2466_1  86 CANLTTVYLGGCYnLTDAAVIALA 109
                 77**********55*****99998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.2   0.00082       1.6       1      15 [.      10      28 ..      10      56 .. 0.80
   2 !    5.8   0.0    0.0087        17       1      14 [.      62      76 ..      58      86 .. 0.82
   3 !    8.4   0.0    0.0012       2.3       1      15 [.      88     106 ..      88     119 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00082
                TESEEEETSS.BCBC...H CS
  PF00560.28  1 nLeeLdLsgN.nlts...l 15
                nL+++dL ++ nlt+   +
  MMETSP1325-20131115|2466_1 10 NLTTIDLVNCdNLTDaavI 28
                8************975651 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0087
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                n+++++L ++ nlt+
  MMETSP1325-20131115|2466_1 62 NITTIYLGRCsNLTD 76
                678999999999985 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0012
                 TESEEEETSS.BCBC...H CS
  PF00560.28   1 nLeeLdLsgN.nlts...l 15 
                 nL++ +L g+ nlt+   +
  MMETSP1325-20131115|2466_1  88 NLTTVYLGGCyNLTDaavI 106
                 8************975551 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.1    0.0035       6.8      24      41 ..       9      27 ..       4      57 .. 0.62
   2 ?    3.9   0.0      0.02        38       6      38 ..      40      76 ..      34      84 .. 0.68
   3 !   10.4   0.0   0.00018      0.35       2      41 ..      62     105 ..      61     118 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0035
   PF12799.2 24 pnLktLnLsnN.pisdlsa 41
                 nL+t++L n+ +++d  +
  MMETSP1325-20131115|2466_1  9 ANLTTIDLVNCdNLTDAAV 27
                4666666666645555433 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.02
   PF12799.2  6 LdLsn.NnIkdlppela...nLpnLktLnLsnN.pisd 38
                ++Ls+ +n++d    +a    + n +t++L ++ +++d
  MMETSP1325-20131115|2466_1 40 IYLSGwTNLSDATV-IAlatHCANITTIYLGRCsNLTD 76
                66776677777665.44334788999999998855776 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 0.00018
   PF12799.2   2 nLevLdLsnN.nIkd..lppela.nLpnLktLnLsnN.pisdlsa 41 
                 n ++++L ++ n++d  + + la n+ nL+t +L ++ +++d  +
  MMETSP1325-20131115|2466_1  62 NITTIYLGRCsNLTDtaVIA-LAtNCANLTTVYLGGCyNLTDAAV 105
                 78899999874699844334.4259************77999654 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.1   0.00028      0.56       2      56 ..      10      68 ..       9      74 .. 0.76
   2 !    8.5   0.0   0.00076       1.5       2      39 ..      62     102 ..      61     119 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00028
   PF13855.1  2 nLkeLdLsnN.rlkvipdgaFk.glsnLkvLdLs.gnnlksispea.fkgLpsLreLnL 56
                nL+++dL n+ +l++ +  a+  ++ n + ++Ls  +nl+     a   ++ +++ ++L
  MMETSP1325-20131115|2466_1 10 NLTTIDLVNCdNLTDAAVIALAtHCANITAIYLSgWTNLSDATVIAlATHCANITTIYL 68
                9*******9999****99888889**********7677765544321456666666666 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00076
   PF13855.1   2 nLkeLdLsnN.rlkvipdgaFk.glsnLkvLdLs.gnnlks 39 
                 n+++++L ++ +l++ +  a+  ++ nL++ +L+ + nl+ 
  MMETSP1325-20131115|2466_1  62 NITTIYLGRCsNLTDTAVIALAtNCANLTTVYLGgCYNLTD 102
                 7899999976699999998888799********97778775 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.011        22       2      15 ..      10      24 ..       9      28 .. 0.90
   2 ?    1.4   0.0       0.3   5.9e+02       4      14 ..      64      75 ..      59      80 .. 0.81
   3 ?    3.7   0.0     0.051     1e+02       2      15 ..      88     102 ..      87     106 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.011
   PF13504.1  2 nLkeLdLsgnr.Lts 15
                nL++ dL +++ Lt+
  MMETSP1325-20131115|2466_1 10 NLTTIDLVNCDnLTD 24
                8*********88985 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.3
   PF13504.1  4 keLdLsgnr.Lt 14
                ++ +L +++ Lt
  MMETSP1325-20131115|2466_1 64 TTIYLGRCSnLT 75
                677899998888 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.051
   PF13504.1   2 nLkeLdLsgnr.Lts 15 
                 nL++ +L g++ Lt+
  MMETSP1325-20131115|2466_1  88 NLTTVYLGGCYnLTD 102
                 89999*****88985 PP

>> PF02410.10  Oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1    0.0098        19      13      46 ..       7      40 ..       2      53 .. 0.84
   2 ?    5.4   0.1    0.0081        16       9      43 ..      55      89 ..      48      99 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0098
                T-EEEEEEE----B----EEEEEE---HHHHHHH CS
  PF02410.10 13 kaedivvldvsekssiadyfviatgkserhvkal 46
                ++ + +++d+ +  +++d +via ++    ++a+
  MMETSP1325-20131115|2466_1  7 HCANLTTIDLVNCDNLTDAAVIALATHCANITAI 40
                5678999*****************9999988887 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0081
                HHHTT-EEEEEEE----B----EEEEEE---HHHH CS
  PF02410.10  9 leekkaedivvldvsekssiadyfviatgkserhv 43
                +   ++ +i+++ + + s+++d +via +++   +
  MMETSP1325-20131115|2466_1 55 ALATHCANITTIYLGRCSNLTDTAVIALATNCANL 89
                45567889*******************99987766 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.037        73      85     115 ..       6      36 ..       2      43 .. 0.71
   2 ?    6.2   0.2    0.0034       6.6      76     115 ..      49      88 ..      39      92 .. 0.79
   3 ?    5.7   0.3    0.0047       9.1      73     114 ..      72     113 ..      71     119 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.037
   PF04528.8  85 ksCaelseisvrcCarrtrellrralkllek 115
                 ++Ca+l+ i + +C + t + +  +++ +++
  MMETSP1325-20131115|2466_1   6 THCANLTTIDLVNCDNLTDAAVIALATHCAN 36 
                 5788888888888888887777666666554 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0034
   PF04528.8  76 lnnlvvlvCksCaelseisvrcCarrtrellrralkllek 115
                 ++  v+ + ++Ca+ + i++ +C + t   +  +++ +++
  MMETSP1325-20131115|2466_1  49 SDATVIALATHCANITTIYLGRCSNLTDTAVIALATNCAN 88 
                 457899999***************9998877766666554 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.0047
   PF04528.8  73 kgllnnlvvlvCksCaelseisvrcCarrtrellrralklle 114
                 + l++  v+ + ++Ca+l+ +++  C + t + +  +++ ++
  MMETSP1325-20131115|2466_1  72 SNLTDTAVIALATNCANLTTVYLGGCYNLTDAAVIALATHCA 113
                 66778899999****************999988777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.77
# Mc/sec: 373.46
//
Query:       MMETSP1325-20131115|2467_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-35  119.9   0.1      1e-34  119.8   0.1    1.0  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.8   0.1   7.5e-39     1e-34      42     154 ..       3     112 ..       1     113 [. 0.86

  Alignments for each domain:
  == domain 1    score: 119.8 bits;  conditional E-value: 7.5e-39
  PF00160.16  42 fhrvikgfmiqgGdpsgkgangeek.kaggesipdEikkkklkh.krGalamartgpepnsngsqFfItlgdaphlDgkytvFGkVvegmdvvekieavetde.kpeknvkiksvg 154
                 fhr+i++fm+qgGd+++ +   +++    g++++dE+  +kl h  +G+l+ma+ g  pn+ngsqFfI+++ +p+l+gk++vFGkV++gmdv+ ++e+ +t + +p+++v+ik++g
  MMETSP1325-20131115|2467_1   3 FHRIIPQFMCQGGDFTNGNG--TGGkSIYGAKFEDEN--FKLVHgGPGTLSMANAG--PNTNGSQFFICTAGTPWLNGKHVVFGKVTSGMDVITRMESLGTPNgRPKTDVIIKDCG 112
                 9*************777644..3222333446*****..57788799******998..7**************************************9665556***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 557.52
//
Query:       MMETSP1325-20131115|2464_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-46  155.4   1.3    2.8e-46  155.3   0.9    1.0  1  PF01221.13 Dynein light chain type 1
  ------ inclusion threshold ------
      0.056   13.6   0.1       0.09   12.9   0.1    1.4  1  PF04155.13 Ground-like domain
       0.28   10.5   1.9       0.33   10.2   1.3    1.1  1  PF12685.2  SpoIIIAH-like protein


Domain annotation for each model (and alignments):
>> PF01221.13  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.3   0.9   6.2e-50   2.8e-46       1      89 []       1      89 []       1      89 [] 0.98

  Alignments for each domain:
  == domain 1    score: 155.3 bits;  conditional E-value: 6.2e-50
                XXXXXX-EEETTS-HHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHH-S-EEEE-------EEES--SEEEEEE----EEEEEE-- CS
  PF01221.13  1 msegkavvkaadmseemqeeaielaaealekfeeekeiAkhiKkefDkkygptWhcivGksFGsyvthekktfiYfyigklaillfktg 89
                m e+kav+k+admse+mq++a+++a++alek+++ek+iA++iKkefDkky+ptWhcivG++FGsyvthe+k+fiYfy+g++a+llfk+g
  MMETSP1325-20131115|2464_1  1 MAERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
                6799***********************************************************************************85 PP

>> PF04155.13  Ground-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1     2e-05      0.09      22      59 ..      33      70 ..       8      74 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2e-05
  PF04155.13 22 ddlseskraiqkaaekefggsfevicsegdFsystntn 59
                + ++ ++  i+k+  k+++ ++ +i+ ++  sy+t+ +
  MMETSP1325-20131115|2464_1 33 NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHET 70
                3457899*****************************98 PP

>> PF12685.2  SpoIIIAH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.3   7.3e-05      0.33     105     145 ..       4      44 ..       1      47 [. 0.91

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 7.3e-05
   PF12685.2 105 LkeiinneniseeekkeAqdklleltekaekenaiEtllka 145
                  k++i+n+++se+++++A+d   +  ek + e+ i   +k+
  MMETSP1325-20131115|2464_1   4 RKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKK 44 
                 5899*****************************99998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      573  (0.0419105); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.63
# Mc/sec: 338.53
//
Query:       MMETSP1325-20131115|2468_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   14.9   1.8      0.019   14.7   1.2    1.2  1  PF06271.7 RDD family
      0.082   11.1   0.9      0.097   10.8   0.6    1.1  1  PF06151.8 Trehalose receptor
       0.55    9.7   4.7       0.96    8.9   3.2    1.4  1  PF11395.3 Protein of unknown function (DUF2873)


Domain annotation for each model (and alignments):
>> PF06271.7  RDD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   1.2   4.2e-06     0.019      44      96 ..      25      78 ..      12      88 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 4.2e-06
   PF06271.7 44 llllillllllllvlllyivlllskkgqTlGkrllglkvvd.edgeklslkqal 96
                ++l il+++l l+++++y ++ + ++gq   + ++g + vd ++g+k+s+  a 
  MMETSP1325-20131115|2468_1 25 GFLHILFSVLTLCIYFWYSLIYVNSRGQLAHQTFFGFQCVDfKTGKKVSWFMAA 78
                3467888899999999999999999*************************9765 PP

>> PF06151.8  Trehalose receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.6   2.1e-05     0.097     312     327 ..      37      52 ..      27      60 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.1e-05
   PF06151.8 312 alyFwfsLlyligRtl 327
                  +yFw+sL+y+ +R  
  MMETSP1325-20131115|2468_1  37 CIYFWYSLIYVNSRGQ 52 
                 69*********99965 PP

>> PF11395.3  Protein of unknown function (DUF2873)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.2   0.00021      0.96      16      32 ..      28      44 ..      18      47 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00021
   PF11395.3 16 FLLFLvLimLiiFWFsL 32
                 +LF vL + i FW+sL
  MMETSP1325-20131115|2468_1 28 HILFSVLTLCIYFWYSL 44
                469*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|2471_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|2473_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 397.97
//
Query:       MMETSP1325-20131115|2474_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 282.43
//
Query:       MMETSP1325-20131115|2472_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-05   24.5   0.0      2e-05   24.1   0.0    1.2  1  PF13621.1 Cupin-like domain
    0.00045   19.4   0.0     0.0011   18.1   0.0    1.2  1  PF08007.7 Cupin superfamily protein


Domain annotation for each model (and alignments):
>> PF13621.1  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   2.9e-09     2e-05     206     247 ..      75     114 ..      40     117 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 2.9e-09
   PF13621.1 206 kalevelepGevLYlPalWfHeVsssseegvhiavnywydpp 247
                 + + +el pG++ Y+P  +fH  +    egv+++vn+w+d+ 
  MMETSP1325-20131115|2472_1  75 PVWAIELGPGDAAYIPPYFFHATEPA--EGVTASVNVWFDSA 114
                 67889*******************99..9**********985 PP

>> PF08007.7  Cupin superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.6e-07    0.0011     161     220 ..      62     120 ..      49     168 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 1.6e-07
                 -EE--TTT--..--SEEEEE----EEEE----EEEEE---.----EEEEEEEE-TT..-- CS
   PF08007.7 161 kseeplkildefepvedfvLepGDlLYlPrgviHqgvaedesltlSvglraptaaelles 220
                 + + + +  +  epv  + L pGD  Y+P+ + H  ++ + ++t Sv +   +a+  +e+
  MMETSP1325-20131115|2472_1  62 RHRLDATVAESGEPVWAIELGPGDAAYIPPYFFHATEPAE-GVTASVNVWFDSAQRRIED 120
                 4445555556669************************997.******9877777765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 1442.81
//
Query:       MMETSP1325-20131115|2475_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1085.70
//
Query:       MMETSP1325-20131115|2477_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1303.62
//
Query:       MMETSP1325-20131115|2483_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 397.80
//
Query:       MMETSP1325-20131115|2482_1  [L=495]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-18   65.2   0.0    8.2e-18   64.4   0.0    1.4  1  PF13358.1  DDE superfamily endonuclease
    4.1e-06   26.1   0.1    1.1e-05   24.8   0.1    1.7  1  PF13592.1  Winged helix-turn helix
    6.5e-05   23.5   2.0    0.00052   20.6   0.0    2.9  3  PF13565.1  Homeodomain-like domain
    0.00013   21.8   0.3    0.00035   20.5   0.2    1.8  1  PF13551.1  Winged helix-turn helix
  ------ inclusion threshold ------
      0.032   13.8   0.0      0.062   12.8   0.0    1.4  1  PF00292.13 'Paired box' domain


Domain annotation for each model (and alignments):
>> PF13358.1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.0     3e-21   8.2e-18       3     137 ..     309     446 ..     307     454 .. 0.94

  Alignments for each domain:
  == domain 1    score: 64.4 bits;  conditional E-value: 3e-21
   PF13358.1   3 vflDEsgfnlht.krrrswakkgkreraekskgrgqrvsvigaidgadptap.vveeetfnaedfaefleklleellqen...kivivlDnasyHkskelqklieaeaaglellflPpysPdLNpiElvWsvlkekvarr 137
                 +f DEs+ + ++ +rrr+++++g r+   ++  rg + s +g ++  ++     +  + ++++ f+ +++  + ++ qe    + v+v+Dna +H+   +++liea   g++llflP+y+ +LNpiE+ +++ k+ + r+
  MMETSP1325-20131115|2482_1 309 LFADESRKEPKSlHRRRGRGRRGFRVPVYQDLVRGTSFSALGVLSLYGMVDYaITSAKGVKTDMFVSMVADHIVPHCQEFpgpNSVVVMDNAEVHRDLRVRALIEA--TGARLLFLPAYANNLNPIEESFAKAKRFLERE 446
                 89***********************6669*******************9999888899*********9999999999977999***********************..***************************99883 PP

>> PF13592.1  Winged helix-turn helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.1   3.8e-09   1.1e-05      11      58 ..     251     298 ..     247     300 .. 0.92

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 3.8e-09
   PF13592.1  11 aayIeerFgvtyspsgvyklLhrlGfsyqkPryrppkadeekqeaFkk 58 
                 ++ ++e Fg t+ +s+++  L+r+G++++k    + ++d+++ ea+ +
  MMETSP1325-20131115|2482_1 251 RERLREHFGQTFAVSTICTTLRRHGYTWKKLHLLAMRRDKAEEEAWTA 298
                 67789*****************************************76 PP

>> PF13565.1  Homeodomain-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.011        29      38      77 .]     168     204 ..     162     204 .. 0.83
   2 !   20.6   0.0   1.9e-07   0.00052       1      74 [.     199     268 ..     199     271 .. 0.81
   3 ?   -2.7   0.4       3.5   9.7e+03      22      30 ..     323     332 ..     314     342 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.011
   PF13565.1  38 elikllleeprwtpreiaeaLaeefgigvrvShstvyRiL 77 
                 ++i+l  ++   +p++i+++L+  +g+ v +  +tv R+L
  MMETSP1325-20131115|2482_1 168 RVIELKYDH-LHSPKKIVRLLRAGGGR-V-MPLRTVERVL 204
                 577887777.99**********96554.3.69****9997 PP

  == domain 2    score: 20.6 bits;  conditional E-value: 1.9e-07
   PF13565.1   1 TvyrwlkryregGlagLkd..rkdrprpgrp.....rkdeeeeaelikllleeprwtpreiaeaLaeefgigvrvShstvy 74 
                 Tv r l+ +r +G     d  +   p +gr+     +k   + ++l+ l++ +p   + e++e+L+e+fg+++   +st+ 
  MMETSP1325-20131115|2482_1 199 TVERVLQLFRDTG-----DvrL---PCRGRRrrlavIK-GXMWQFLESLVENDPSIFLSEMRERLREHFGQTF--AVSTIC 268
                 99****88*****.....8653...3333332235666.9999***************************999..999986 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 3.5
   PF13565.1  22 drprpgrp.r 30 
                 +r+ +gr+  
  MMETSP1325-20131115|2482_1 323 RRRGRGRRgF 332
                 3333444433 PP

>> PF13551.1  Winged helix-turn helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.2   1.3e-07   0.00035      26     113 .]     197     275 ..     166     275 .. 0.78

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 1.3e-07
   PF13551.1  26 rrtvyrwlkrfeegglaalldrkrrsgrprnlrlseeqeaalvalarekppegqarwtlrllaeqlieeefgvtlskstvrriLkrlg 113
                  rtv r+l++f+ +g   l   + r++r +   +++ + ++l +l++++p      + l  ++e+l  e fg+t  +st+ + L+r+g
  MMETSP1325-20131115|2482_1 197 LRTVERVLQLFRDTGDVRLPC-RGRRRRLAV--IKGXMWQFLESLVENDP-----SIFLSEMRERL-REHFGQTFAVSTICTTLRRHG 275
                 69*************999999.666799986..6************9999.....47899999999.7789****************8 PP

>> PF00292.13  'Paired box' domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.3e-05     0.062      21     105 ..     164     256 ..     160     272 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.3e-05
  PF00292.13  21 airkkivelaasgv.rpcvisrqlrvshg......cvskilaryqetgsirpgviggskpk.vatpevvkkieeykrenpsifaweirdkllk 105
                 ++r +++el    +  p +i r lr   g       v ++l+ +++tg +r  + g  +   v    + + +e + +++psif  e+r++l +
  MMETSP1325-20131115|2482_1 164 MLRWRVIELKYDHLhSPKKIVRLLRAGGGrvmplrTVERVLQLFRDTGDVRLPCRGRRRRLaVIKGXMWQFLESLVENDPSIFLSEMRERLRE 256
                 5788999998766526999999999998833333346899***********8887765543488889999********************854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.83u 0.38s 00:00:01.21 Elapsed: 00:00:00.65
# Mc/sec: 1824.92
//
Query:       MMETSP1325-20131115|2488_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 811.40
//
Query:       MMETSP1325-20131115|2486_1  [L=413]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       562  (0.0411059); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.38s 00:00:01.12 Elapsed: 00:00:00.54
# Mc/sec: 1832.77
//
Query:       MMETSP1325-20131115|2484_1  [L=507]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-48  163.5   0.0    3.5e-48  163.0   0.0    1.2  1  PF01512.12 Respiratory-chain NADH dehydrogenase 51 Kd subunit
    3.9e-19   67.4   0.4    8.8e-19   66.2   0.3    1.6  1  PF10589.4  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
    6.3e-08   32.2   0.1    1.8e-07   30.7   0.0    1.8  2  PF10531.4  SLBB domain


Domain annotation for each model (and alignments):
>> PF01512.12  Respiratory-chain NADH dehydrogenase 51 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.0   0.0   7.7e-52   3.5e-48       1     148 [.     100     270 ..     100     273 .. 0.97

  Alignments for each domain:
  == domain 1    score: 163.0 bits;  conditional E-value: 7.7e-52
  PF01512.12   1 vkeagivGrGGagFptgvKlkakak.kk...kylivNaaEcEPgltkDrllmreephevleGleiaaealgaekivigvrdekpeaiealekaiaeakaagl...........leievvelagkYpaGeekaLiesltgr.evprgklp..advgv.....vvnNveTlaa 148
                 +k++g++GrGGagFp+g+K+++++k ++    +l+vNa+E+EPg++kDr +mr++ph+++eG+ +a +a++a+ ++i++r+e+ +++  l++ai+ea+aag+           +++ ++++ag+Y++Gee+aLiesl+g+ + pr k+p  a+vgv     +v NveT+a 
  MMETSP1325-20131115|2484_1 100 IKDSGLRGRGGAGFPSGLKWSFMPKaTDgrpSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAAGFlgknacgsgydFDVYLHRGAGAYVCGEETALIESLEGKqGKPRLKPPfpANVGVfgcpsTVTNVETIAV 270
                 79***********************5559**********************************************************************************************************************998888998************985 PP

>> PF10589.4  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.3   1.9e-22   8.8e-19       1      45 [.     384     428 ..     384     429 .. 0.94

  Alignments for each domain:
  == domain 1    score: 66.2 bits;  conditional E-value: 1.9e-22
                 HHHHHHHHHHHHHH-----HHHH-----HHHHHHH-------HHH CS
   PF10589.4   1 vavarfameFcaaESCGkCtPCRiGttrlvelldriargegradd 45 
                 va++r++++F+ +ESCG+CtPCR+Gt +l e+l r+++g+++ ++
  MMETSP1325-20131115|2484_1 384 VAAIRRLAHFYRHESCGQCTPCREGTGWLEEILVRMEKGDADVRE 428
                 799************************************997665 PP

>> PF10531.4  SLBB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.8   8.4e+03      28      40 ..      51      64 ..      51      69 .. 0.65
   2 !   30.7   0.0     4e-11   1.8e-07       2      58 ..     296     346 ..     295     346 .. 0.93

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 1.8
                TT-----S...... CS
   PF10531.4 28 qAGGltdd.ayrds 40
                q+GGl d+   +++
  MMETSP1325-20131115|2484_1 51 QYGGLKDTdRIFTN 64
                68999998444555 PP

  == domain 2    score: 30.7 bits;  conditional E-value: 4e-11
                 E--B---S----EEE----BHHHHHHTT-----S.........-EEEEE-----S-- CS
   PF10531.4   2 vtVtGeVkrPgvyevpiGttlsdlleqAGGltddayrdsinltrlkaviagGpmmgi 58 
                 + ++G+V++P v+e  +  +l++lle+ +G+++ ++       +l+avi+gG+++++
  MMETSP1325-20131115|2484_1 296 FGISGHVNNPIVVEEEMSISLQELLEKHCGGVRGGW------NNLQAVIPGGSSVPV 346
                 569******************************998......79999******9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.32s 00:00:01.13 Elapsed: 00:00:00.53
# Mc/sec: 2292.36
//
Query:       MMETSP1325-20131115|2490_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0051   16.8   0.2      0.011   15.7   0.0    1.6  2  PF00447.12 HSF-type DNA-binding
  ------ inclusion threshold ------
       0.04   13.2   0.6      0.045   13.1   0.4    1.0  1  PF03087.9  Arabidopsis protein of unknown function
       0.13   10.3   0.2       0.13   10.2   0.1    1.0  1  PF03273.8  Baculovirus gp64 envelope glycoprotein family
       0.64    9.9   2.8       0.73    9.7   0.3    2.1  3  PF00170.16 bZIP transcription factor


Domain annotation for each model (and alignments):
>> PF00447.12  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.2e-06     0.011      80     101 ..       2      23 ..       1      26 [. 0.91
   2 ?   -1.5   0.0      0.75   2.6e+03      49      58 ..      44      53 ..      33      66 .. 0.72

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 3.2e-06
  PF00447.12  80 eFkhksFkkgkkellekikrkk 101
                 eFkh+sFkk++  ll++ikr  
  MMETSP1325-20131115|2490_1   2 EFKHESFKKEQPGLLKQIKRTG 23 
                 8*******************75 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.75
  PF00447.12 49 nfaSFvRQLn 58
                +++S+  QL+
  MMETSP1325-20131115|2490_1 44 QMSSMQEQLD 53
                5556555554 PP

>> PF03087.9  Arabidopsis protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.4   1.3e-05     0.045      88     151 ..       5      66 ..       2      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.3e-05
   PF03087.9  88 rkklkkeikkllkslkktktkvvnnnedqesasavvdvleetvsvtvsvlrsvlsfLstktkks 151
                 + + kke   llk +k+t t  +++n+ ++ +s  +++l+e++s+  + l ++ +++   ++++
  MMETSP1325-20131115|2490_1   5 HESFKKEQPGLLKQIKRTGT--TDQNNREGAESSETELLREQMSSMQEQLDTLTNLVAQIVQEH 66 
                 56789**************9..5666667779999***********999999999888755555 PP

>> PF03273.8  Baculovirus gp64 envelope glycoprotein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   3.8e-05      0.13     272     324 ..      12      64 ..       2      67 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 3.8e-05
   PF03273.8 272 eklkhdegataskgdlmalqeelvyenelLrlnlelldarinklsnllddlik 324
                 ++   ++ +    +d ++ + +   e+elLr +++ +++++ +l nl+ ++++
  MMETSP1325-20131115|2490_1  12 QPGLLKQIKRTGTTDQNNREGAESSETELLREQMSSMQEQLDTLTNLVAQIVQ 64 
                 4444455566667788888888899************************9997 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.28   9.5e+02      34      51 ..       4      21 ..       2      27 .. 0.74
   2 ?   -1.3   0.0      0.58     2e+03      11      18 ..      27      34 ..      17      36 .. 0.73
   3 ?    9.7   0.3   0.00021      0.73      34      62 ..      37      65 ..      35      67 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.28
                HHHHHHHHH.......HH CS
  PF00170.16 34 kvkeLeaeNkaLkkelee 51
                k +++++e   L k++++
  MMETSP1325-20131115|2490_1  4 KHESFKKEQPGLLKQIKR 21
                557778888778777765 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.58
                HHHHHHHH CS
  PF00170.16 11 qkNReAAr 18
                q NRe A 
  MMETSP1325-20131115|2490_1 27 QNNREGAE 34
                67888775 PP

  == domain 3    score: 9.7 bits;  conditional E-value: 0.00021
                HHHHHHHHH.......HHHHHHHHHHHHH CS
  PF00170.16 34 kvkeLeaeNkaLkkeleelkkevaklkse 62
                + + L +++++++++l++l+++va+  +e
  MMETSP1325-20131115|2490_1 37 ETELLREQMSSMQEQLDTLTNLVAQIVQE 65
                568899*****************997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1157  (0.0846255); expected 273.4 (0.02)
Passed bias filter:                      833  (0.0609274); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.46s 00:00:00.86 Elapsed: 00:00:00.59
# Mc/sec: 284.31
//
Query:       MMETSP1325-20131115|2491_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 265.78
//
Query:       MMETSP1325-20131115|2492_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      481  (0.0351814); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 733.00
//
Query:       MMETSP1325-20131115|2495_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-08   32.4   1.1    4.7e-07   29.5   0.8    2.1  1  PF05173.9  Dihydrodipicolinate reductase, C-terminus
      0.002   17.8   0.0      0.005   16.6   0.0    1.7  1  PF01113.15 Dihydrodipicolinate reductase, N-terminus
  ------ inclusion threshold ------
       0.11   12.4   0.1       0.19   11.6   0.1    1.4  1  PF10466.4  Saccharopepsin inhibitor I34


Domain annotation for each model (and alignments):
>> PF05173.9  Dihydrodipicolinate reductase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.8     1e-10   4.7e-07       4     132 .]      51     207 ..      49     207 .. 0.66

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 1e-10
   PF05173.9   4 lllklvekaakllee...eydveiiElhhrkKkDaPSGTAlklaeaiaear............eeeleeearggre.................kkkeigihsiRlgdvvge..hevifaseger..leikhealsreiFakGalkaaewlagkkkpg.......lysmedvl 132
                  l++++e++a  ++     y+ +i+E h++ K+D+ SGTA ++a+++a                           e                 +  + +++ +  + + g+  h+  ++s + +   +++h+   r+++a+G+  a+ +la+ +++g       +y+m dvl
  MMETSP1325-20131115|2495_1  51 ALQAMLEQMATNFPGsfaGYELKITESHQSTKADT-SGTAKAVADTLATLIsdeavakvqandY-----------EeivrvrdtsaqlagapsE--TPQLNLVPEEALNGHafHTYSLVSGDGSveFQFRHNVCGRRMYAEGTADAVGYLAK-QLQGeggakqrIYTMVDVL 207
                 4566777777777766889***************6.************9885555555443330...........2445555567777787443..4444444444444432266666665555015679*******************998.4334224555577777765 PP

>> PF01113.15  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.1e-06     0.005      83     124 .]       2      45 ..       1      45 [. 0.83

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.1e-06
                 HHHHHHHHT---EE---S--HHHHHHHHHHTTT..S--EE-S-- CS
  PF01113.15  83 nlklalekgvklViGTTGlseeelaeleelakk..igvviapNf 124
                 n++l+++ g ++V+GTTG + ++l+    + ++   ++viapN+
  MMETSP1325-20131115|2495_1   2 NAALYARLGLPFVMGTTGGDRQKLEATVLANSDstFAAVIAPNM 45 
                 56667777***********9999988777665567********9 PP

>> PF10466.4  Saccharopepsin inhibitor I34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   4.2e-05      0.19       7      58 ..      73     124 ..      69     132 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.2e-05
   PF10466.4   7 kvseifqsskeklqGdakvvsdafkkmasqdkdGkttdadesekhnyqeqyn 58 
                 k++e  qs+k    G ak v+d++  + s +   k    d  e    ++   
  MMETSP1325-20131115|2495_1  73 KITESHQSTKADTSGTAKAVADTLATLISDEAVAKVQANDYEEIVRVRDTSA 124
                 899**************************99998888777766655555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.76
# Mc/sec: 788.28
//
Query:       MMETSP1325-20131115|2497_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        5.2    6.9   9.2        5.9    6.7   6.3    1.2  1  PF14181.1  YqfQ-like protein


Domain annotation for each model (and alignments):
>> PF14181.1  YqfQ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.3   0.00043       5.9     100     146 ..       9      55 ..       1      74 [. 0.34

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00043
   PF14181.1 100 eeteeeeeesteeeekeeeeetktekkekkkkevkkskkekekekee 146
                 +e +e+ e ++ e e+++e ++++e+ +++++e+++  +++ ++k+e
  MMETSP1325-20131115|2497_1   9 QERKEAWEAKQREREEAKERRAREEEDRQRRREEERLRERERRQKDE 55 
                 11222222222222222222222222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1869  (0.136703); expected 273.4 (0.02)
Passed bias filter:                     1012  (0.0740199); expected 273.4 (0.02)
Passed Vit filter:                       302  (0.0220889); expected 13.7 (0.001)
Passed Fwd filter:                        88  (0.00643651); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.47s 00:00:01.23 Elapsed: 00:00:00.64
# Mc/sec: 288.31
//
Query:       MMETSP1325-20131115|2496_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       794  (0.0580749); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.49
# Mc/sec: 1061.24
//
Query:       MMETSP1325-20131115|2487_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       473  (0.0345963); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 1138.27
//
Query:       MMETSP1325-20131115|2498_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 617.52
//
Query:       MMETSP1325-20131115|2501_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.65
# Mc/sec: 224.89
//
Query:       MMETSP1325-20131115|2502_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-13   49.3   0.1    7.3e-07   27.9   0.1    2.5  2  PF00036.27 EF hand
    7.5e-11   40.8   0.0    5.8e-05   22.5   0.0    2.5  2  PF13405.1  EF-hand domain
    1.6e-10   40.8   3.2    4.8e-08   32.9   0.5    2.0  2  PF13499.1  EF-hand domain pair
    6.7e-09   34.5   0.3    7.7e-05   21.7   0.0    2.5  2  PF13202.1  EF hand
    1.9e-08   33.6   0.0      0.001   18.4   0.0    2.4  2  PF13833.1  EF-hand domain pair
    0.00042   19.8   0.7       0.57    9.8   0.0    2.2  2  PF12763.2  Cytoskeletal-regulatory complex EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.1   3.2e-10   7.3e-07       2      28 ..      54      80 ..      53      81 .. 0.91
   2 !   19.0   0.0   2.3e-07   0.00053       3      24 ..      96     117 ..      94     119 .. 0.88

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 3.2e-10
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                +k +F ++D+D+dG+I++ Ef +++++
  MMETSP1325-20131115|2502_1 54 IKAMFGLIDTDQDGTINYHEFESVVNM 80
                799******************998875 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 2.3e-07
                 HHHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfke 24 
                 + +++++D+D++G ++f+E+++
  MMETSP1325-20131115|2502_1  96 RLLWSLLDRDNSGSVDFNELLK 117
                 567999**************87 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   2.5e-08   5.8e-05       2      27 ..      54      79 ..      53      87 .. 0.89
   2 !   16.0   0.0   3.1e-06    0.0072       5      25 ..      98     118 ..      94     121 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.5e-08
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                +++ F l+D+d+dG+i+ +E+ ++ +
  MMETSP1325-20131115|2502_1 54 IKAMFGLIDTDQDGTINYHEFESVVN 79
                7899*****************99887 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 3.1e-06
                 --GCC-------B---HHHHH CS
   PF13405.1   5 aFklfDkdgdGkidaeELrda 25 
                 ++ l+D+d++G +d++EL+++
  MMETSP1325-20131115|2502_1  98 LWSLLDRDNSGSVDFNELLKV 118
                 6789**************986 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.5   2.1e-11   4.8e-08       2      64 ..      54     117 ..      15     118 .. 0.92
   2 !   14.6   0.0     1e-05     0.024       5      25 ..      98     118 ..      84     134 .. 0.84

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 2.1e-11
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels.deevrevldyifkelDkngdGvlsfeEflq 64 
                 +k +F l+D+d+dg++++ e++ + + l+  l+ +++    ++ ++  lD +++G ++f+E+l+
  MMETSP1325-20131115|2502_1  54 IKAMFGLIDTDQDGTINYHEFESVVNMLNKSLRqNSHRLLDARLLWSLLDRDNSGSVDFNELLK 117
                 67799*********************999777766666669999*****************986 PP

  == domain 2    score: 14.6 bits;  conditional E-value: 1e-05
   PF13499.1   5 aFkllDkdgdgyldkeeLlrl 25 
                 +++llD+d++g++d +eLl++
  MMETSP1325-20131115|2502_1  98 LWSLLDRDNSGSVDFNELLKV 118
                 5899**************987 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   3.4e-08   7.7e-05       1      25 []      54      78 ..      54      78 .. 0.92
   2 !   10.6   0.1   0.00011      0.25       7      23 ..     101     117 ..     100     118 .. 0.88

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 3.4e-08
                HHHHHHHH--S----B-HHHHHHHH CS
   PF13202.1  1 lkdtFrafDlNgDGkIsreELkrlv 25
                +k++F  +D++ DG+I+  E++ +v
  MMETSP1325-20131115|2502_1 54 IKAMFGLIDTDQDGTINYHEFESVV 78
                7899*****************9875 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00011
                 HH--S----B-HHHHHH CS
   PF13202.1   7 afDlNgDGkIsreELkr 23 
                  +D +++G +++ EL +
  MMETSP1325-20131115|2502_1 101 LLDRDNSGSVDFNELLK 117
                 58************965 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.6e-07     0.001      27      47 ..      54      74 ..      41      81 .. 0.85
   2 !   13.1   0.0   2.1e-05     0.047      29      48 ..      97     116 ..      82     118 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 4.6e-07
   PF13833.1 27 vdilfrefDtdgdGkisfeEF 47
                + ++f ++Dtd+dG i++ EF
  MMETSP1325-20131115|2502_1 54 IKAMFGLIDTDQDGTINYHEF 74
                789****************** PP

  == domain 2    score: 13.1 bits;  conditional E-value: 2.1e-05
   PF13833.1  29 ilfrefDtdgdGkisfeEFc 48 
                  l +++D+d++G ++f+E +
  MMETSP1325-20131115|2502_1  97 LLWSLLDRDNSGSVDFNELL 116
                 566789************76 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00025      0.57      43      71 ..      52      80 ..      38      94 .. 0.78
   2 !    9.0   0.1   0.00045         1      46      65 ..      96     115 ..      79     118 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00025
   PF12763.2 43 dklekiwdladidedgkldfeefciamrl 71
                  ++ ++ l d d+dg+++++ef  ++ +
  MMETSP1325-20131115|2502_1 52 ASIKAMFGLIDTDQDGTINYHEFESVVNM 80
                46788999***************765554 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00045
   PF12763.2  46 ekiwdladidedgkldfeef 65 
                   +w+l d d+ g++df+e+
  MMETSP1325-20131115|2502_1  96 RLLWSLLDRDNSGSVDFNEL 115
                 348***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|2499_1  [L=411]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.3e-157  523.0   0.9   4.8e-157  522.9   0.6    1.0  1  PF00421.14 Photosystem II protein


Domain annotation for each model (and alignments):
>> PF00421.14  Photosystem II protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  522.9   0.6  3.5e-161  4.8e-157      51     404 ..       1     411 []       1     411 [] 0.99

  Alignments for each domain:
  == domain 1    score: 522.9 bits;  conditional E-value: 3.5e-161
  PF00421.14  51 myeqglillpflarLGlgvswggevidtepvfvvg...vlglissavllsGllflalvgpevledslelFe..rtgkdkldlpkilGiHLlllGllafllvakaltglfvydiwvsgdvrlitgkvlnvavifgyelkspfngggvdnledivggHiavgilliigGifHllvrPlerlkkal.vgsieavLsyslaavalaaFvaagtvwynnaayPielfGptryeadq...aqeierrvr.....daslseavssiqeklalykylgnsPakeilfr.Gemnkgddiaepwlehlvfkd..G...................lDkdkvvradiPfr...skysie..........................yarkaqlGelfevdrvalesdgvfrvspRgWltfgHfvlallffvg 404
                 m++qg++++pf+arLG+++swgg++i++e+v+++g   ++g++ ++++lsGl+fla+++++v++d lelF+  rt +++ldlpki+GiHL+l+Gll+f+++a+++tglf+++iwvs d+++itgkv++ a+++g+++++pfn+gg      ++++Hia+g+l+i++GifHl+vrP++rl++ l +g+ie+vLs+s++av++aaFv++gt+wy++a++PielfGptry++d+   +qeierrv+     + s +ea+s+i++kla+y+y+gn+Pak++lfr G+m+kgd+iae+wl+h+vfkd  G                   +Dkd+++radiPfr   skysie                          +arkaqlGe+fe+dr++lesdgvfr+spRgW+tfgH+ +allff+g
  MMETSP1325-20131115|2499_1   1 MWRQGMYVMPFMARLGVTDSWGGWSITGESVSNPGlwsFEGVALTHIVLSGLCFLAAIWHWVYWD-LELFRdpRTDEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVS-DAYGITGKVQPCAPSWGADGFNPFNPGG------VAAHHIAAGTLGILAGIFHLTVRPPQRLYRGLrMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSgyfQQEIERRVEesldeGLSATEAWSRIPDKLAFYDYIGNNPAKGGLFRsGPMDKGDGIAESWLGHPVFKDkeGreltvrrmpaffetfpvilVDKDGIIRADIPFRraeSKYSIEqvgvtvdfyggklngqsfkdaptvkkFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHVNFALLFFFG 411
                 9****************************************************************.*************************************************9.****************************......********************************************************************************************99*9899999*************************************************777****************************************************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.38s 00:00:01.10 Elapsed: 00:00:00.57
# Mc/sec: 1698.11
//
Query:       MMETSP1325-20131115|2503_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|2506_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-08   32.6   0.1    1.3e-07   31.7   0.0    1.5  1  PF01734.17 Patatin-like phospholipase
  ------ inclusion threshold ------
       0.09   12.3   0.0       0.17   11.4   0.0    1.4  1  PF08407.6  Chitin synthase N-terminal


Domain annotation for each model (and alignments):
>> PF01734.17  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.0   1.8e-11   1.3e-07     163     202 ..       3      42 ..       1      44 [. 0.94

  Alignments for each domain:
  == domain 1    score: 31.7 bits;  conditional E-value: 1.8e-11
  PF01734.17 163 vpladavraSsafPglfppvsldgelyvDGGildNnPila 202
                  p++ avr+S+ +Pgl++pv ++g  y+DGG+ + +Pi+a
  MMETSP1325-20131115|2506_1   3 LPVRMAVRMSMGVPGLMEPVAYRGHVYCDGGMTNDFPIDA 42 
                 58999*********************************97 PP

>> PF08407.6  Chitin synthase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.5e-05      0.17       8      50 ..     231     274 .]     227     274 .] 0.87

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.5e-05
   PF08407.6   8 kvkltngnlvldcpvptallsalpr.erdseEfthmRYtAvTcd 50 
                 + kl   +l ++ p+p+a+++++ r ++ + E     Y A+T+d
  MMETSP1325-20131115|2506_1 231 ESKLKAXALFMELPIPEAIREQVVRrSQVRAEPMLAQYGACTSD 274
                 56777888999***********98868889999999******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 1215.93
//
Query:       MMETSP1325-20131115|2507_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-19   67.7   0.1      4e-06   27.0   0.0    2.8  3  PF13637.1  Ankyrin repeats (many copies)
    1.5e-17   63.5   0.1    1.6e-10   41.0   0.1    2.1  2  PF12796.2  Ankyrin repeats (3 copies)
    2.6e-15   55.2   0.1    3.1e-08   32.9   0.0    2.7  2  PF00023.25 Ankyrin repeat
    2.3e-11   42.6   0.0     0.0001   22.0   0.0    3.4  3  PF13606.1  Ankyrin repeat
    1.1e-10   41.3   0.9    5.7e-05   23.0   0.1    3.1  3  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
       0.13   12.3   1.4       0.67   10.0   0.1    2.5  2  PF11159.3  Protein of unknown function (DUF2939)


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.8e-09     4e-06       7      54 .]      29      76 ..      24      76 .. 0.89
   2 !   26.4   0.0   2.8e-09   6.4e-06       3      45 ..      58     101 ..      58     104 .. 0.92
   3 !   23.4   0.0   2.5e-08   5.6e-05       3      53 ..      92     147 ..      90     148 .. 0.95

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 1.8e-09
   PF13637.1  7 yaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                 aa+++++e+++  +++gid+   ++ G taLh+A+l+gn++++++L+
  MMETSP1325-20131115|2507_1 29 SAAQQNDTEALQQHVNSGIDPSFANSVGQTALHVAVLWGNVNAAQFLV 76
                6999****************6555666*******************96 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 2.8e-09
   PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGn.taLhiAalrg 45 
                 taLh+a+ +g++ ++++L++ g++i++++e G  t+Lh  a+ g
  MMETSP1325-20131115|2507_1  58 TALHVAVLWGNVNAAQFLVDAGAQIDKRNELGAgTPLHTLARSG 101
                 79*****************************999****877655 PP

  == domain 3    score: 23.4 bits;  conditional E-value: 2.5e-08
   PF13637.1   3 taLhyaai.....sgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                 t+Lh +a+     +grl +++ L+e g+d+  +d+  +taL iA ++g+ ei  +L
  MMETSP1325-20131115|2507_1  92 TPLHTLARsgkpvQGRLACARILIEAGADPFLKDAGDMTALEIADETGDTEISAFL 147
                 89******************************************999999998877 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.1     7e-14   1.6e-10       3      71 ..      29     102 ..      26     104 .. 0.93
   2 !   24.7   0.0   8.3e-09   1.9e-05      28      78 ..      92     147 ..      86     155 .. 0.86

  Alignments for each domain:
  == domain 1    score: 41.0 bits;  conditional E-value: 7e-14
   PF12796.2   3 lAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrngh 71 
                  Aa++++ e++++ +++g d+ +    g+t+Lh+A+  gn++++++L++aga+++ ++     tpLh  +r+g+
  MMETSP1325-20131115|2507_1  29 SAAQQNDTEALQQHVNSGIDPSFansvGQTALHVAVLWGNVNAAQFLVDAGAQIDKRNeLGAGTPLHTLARSGK 102
                 69****************9999999999******************************76668******99986 PP

  == domain 2    score: 24.7 bits;  conditional E-value: 8.3e-09
   PF12796.2  28 tpLhlAaeagn.....leivklLleagadvnakdkegntpLhlAvrnghlelvklL 78 
                 tpLh  a++g+     l+++++L+eagad+  kd+  +t+L +A ++g++e+  +L
  MMETSP1325-20131115|2507_1  92 TPLHTLARSGKpvqgrLACARILIEAGADPFLKDAGDMTALEIADETGDTEISAFL 147
                 79999997765333337**********************************98877 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   1.4e-11   3.1e-08       2      32 ..      56      86 ..      55      87 .. 0.97
   2 !   19.7   0.0   2.1e-07   0.00047       4      32 ..      92     125 ..      92     126 .. 0.97

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 1.4e-11
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                G+T+LH+A+l+gn++ +++L+++GA ++ ++
  MMETSP1325-20131115|2507_1 56 GQTALHVAVLWGNVNAAQFLVDAGAQIDKRN 86
                9***************************998 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 2.1e-07
                 BHHHHHHHTT.....HHHHHHHHHHTTSSTTHBH CS
  PF00023.25   4 TPLHlAalrg.....nlevvklLlsqGAdlnaqd 32 
                 TPLH  a++g     +l +++ L+++GAd+ ++d
  MMETSP1325-20131115|2507_1  92 TPLHTLARSGkpvqgRLACARILIEAGADPFLKD 125
                 9*****************************9887 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.15   3.5e+02       7      28 ..      28      49 ..      22      51 .. 0.79
   2 !   22.0   0.0   4.6e-08    0.0001       2      30 .]      56      84 ..      55      84 .. 0.95
   3 !   14.7   0.0     1e-05     0.024       4      28 ..      92     121 ..      90     123 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.15
   PF13606.1  7 hlAasngrielveaLlengadi 28
                  Aa+++ +e+++  +++g+d+
  MMETSP1325-20131115|2507_1 28 LSAAQQNDTEALQQHVNSGIDP 49
                4599999999998878888886 PP

  == domain 2    score: 22.0 bits;  conditional E-value: 4.6e-08
   PF13606.1  2 GnTpLhlAasngrielveaLlengadina 30
                G+T+Lh+A+  g+++++++L+++ga+i++
  MMETSP1325-20131115|2507_1 56 GQTALHVAVLWGNVNAAQFLVDAGAQIDK 84
                9************************9985 PP

  == domain 3    score: 14.7 bits;  conditional E-value: 1e-05
   PF13606.1   4 TpLhlAasng.....rielveaLlengadi 28 
                 TpLh+ a++g     r++ +++L+e+gad+
  MMETSP1325-20131115|2507_1  92 TPLHTLARSGkpvqgRLACARILIEAGADP 121
                 9*******7622222699**********96 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00048       1.1      23      56 .]      30      63 ..      26      63 .. 0.89
   2 !   23.0   0.1   2.5e-08   5.7e-05      16      54 ..      56      95 ..      44      97 .. 0.93
   3 !   14.5   0.0   1.2e-05     0.027      26      56 .]     105     135 ..     104     135 .. 0.95

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00048
   PF13857.1 23 AakggalevvrlLlapgadlnlrdsdgltaldlA 56
                Aa ++++e+++  ++ g d+   +s g+tal++A
  MMETSP1325-20131115|2507_1 30 AAQQNDTEALQQHVNSGIDPSFANSVGQTALHVA 63
                555*****************************98 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 2.5e-08
   PF13857.1 16 gntpLhlAakggalevvrlLlapgadlnlrdsdg.ltald 54
                g+t+Lh+A+  g+++++++L+++ga ++ r++ g  t+l+
  MMETSP1325-20131115|2507_1 56 GQTALHVAVLWGNVNAAQFLVDAGAQIDKRNELGaGTPLH 95
                77***********************************998 PP

  == domain 3    score: 14.5 bits;  conditional E-value: 1.2e-05
   PF13857.1  26 ggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 +g+l ++r+L+++gad+ l+d+   tal++A
  MMETSP1325-20131115|2507_1 105 QGRLACARILIEAGADPFLKDAGDMTALEIA 135
                 58999*****************99******9 PP

>> PF11159.3  Protein of unknown function (DUF2939)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1    0.0003      0.67      20      37 ..      27      44 ..      21      46 .. 0.93
   2 ?    0.4   0.0      0.29   6.6e+02      67      87 ..     124     144 ..     109     161 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0003
   PF11159.3 20 LkaAieanDaaalselvD 37
                + +A+++nD++al+++v+
  MMETSP1325-20131115|2507_1 27 MLSAAQQNDTEALQQHVN 44
                779**************8 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.29
   PF11159.3  67 aalgaalaaalidpvvdalvt 87 
                 ++ g++ a +++d++ d+ ++
  MMETSP1325-20131115|2507_1 124 KDAGDMTALEIADETGDTEIS 144
                 555555566666665555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       677  (0.0495173); expected 273.4 (0.02)
Passed bias filter:                      523  (0.0382534); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 775.29
//
Query:       MMETSP1325-20131115|2504_1  [L=716]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-11   41.2   0.0      3e-10   39.6   0.0    1.8  1  PF12763.2  Cytoskeletal-regulatory complex EF hand
     0.0012   17.8   0.1     0.0038   16.3   0.0    1.8  1  PF00036.27 EF hand
  ------ inclusion threshold ------
      0.072   13.1   0.0       0.15   12.0   0.0    1.5  1  PF13499.1  EF-hand domain pair
       0.14   12.0   1.0        2.2    8.3   0.0    3.2  4  PF13405.1  EF-hand domain
        0.8    7.2   6.9        1.1    6.7   4.8    1.3  1  PF05758.7  Ycf1


Domain annotation for each model (and alignments):
>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.0   1.1e-13     3e-10      20      96 ..     641     715 ..     628     716 .] 0.89

  Alignments for each domain:
  == domain 1    score: 39.6 bits;  conditional E-value: 1.1e-13
   PF12763.2  20 kpednkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdlvngeikdvPselPewlvpesk 96 
                 + ++ klt + v  +l ++ l+ + l+ +w+ladid+dg ld  ef++a+ l   +vng +  +P+ l   l+p sk
  MMETSP1325-20131115|2504_1 641 DLTEGKLTPEVVRDILSQTGLPFSTLKDVWELADIDKDGLLDEPEFALALFLCRRVVNGAM--LPQVLHPTLIPPSK 715
                 456789****************************************************976..8**********999 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.4e-06    0.0038       2      26 ..     666     690 ..     665     692 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 lk++++++D D+dG ++  Ef  al
  MMETSP1325-20131115|2504_1 666 LKDVWELADIDKDGLLDEPEFALAL 690
                 899******************8776 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.6e-05      0.15      15      63 ..     645     687 ..     642     690 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.6e-05
   PF13499.1  15 gyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63 
                 g+l++e  + +l ++g +   + +++v    ++ +D ++dG+l+ +Ef+
  MMETSP1325-20131115|2504_1 645 GKLTPEVVRDILSQTGLP--FSTLKDV----WELADIDKDGLLDEPEFA 687
                 899999999999999988..6677777....*****************7 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.93   2.5e+03      16      27 ..       5      16 ..       5      21 .. 0.86
   2 ?   -1.0   0.0      0.77   2.1e+03      16      27 ..     123     134 ..     122     140 .. 0.87
   3 ?   -2.4   0.0       2.1   5.8e+03      15      28 ..     645     658 ..     644     661 .. 0.87
   4 ?    8.3   0.0    0.0008       2.2       2      26 ..     666     690 ..     665     698 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.93
                -B---HHHHHHH CS
   PF13405.1 16 kidaeELrdaLr 27
                k++  EL+d+L+
  MMETSP1325-20131115|2504_1  5 KLSMRELGDILK 16
                58899******8 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.77
                 -B---HHHHHHH CS
   PF13405.1  16 kidaeELrdaLr 27 
                 k++  EL+d+L+
  MMETSP1325-20131115|2504_1 123 KLSMRELGDILK 134
                 68999******9 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 2.1
                 --B---HHHHHHH. CS
   PF13405.1  15 GkidaeELrdaLrk 28 
                 Gk++ e +rd+L++
  MMETSP1325-20131115|2504_1 645 GKLTPEVVRDILSQ 658
                 899********985 PP

  == domain 4    score: 8.3 bits;  conditional E-value: 0.0008
                 HH---GCC-------B---HHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaL 26 
                 l+++++l D d+dG +d  E+  aL
  MMETSP1325-20131115|2504_1 666 LKDVWELADIDKDGLLDEPEFALAL 690
                 78999****************9887 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   4.8   0.00042       1.1     223     290 ..     222     298 ..     155     411 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00042
   PF05758.7 223 tkklkelseieer.seeekkkeieaesekkrakqeqeeeeeed...sslaseekedkdkideqeekkveek.....k 290
                  k++ e+++ e++  eee+kk++eae+++k +++eqe +  e+      + e+k  +d++ +++  ++ee+      
  MMETSP1325-20131115|2504_1 222 AKAKAETERKEKEeREEEEKKRVEAEQAAKAHANEQEVTYAEEaalARALAESKALADQLARKQAAEEEEAaaaaaA 298
                 44444444444445788999999999999999999999966662553333455555555544444433333333330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (716 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1990  (0.145553); expected 273.4 (0.02)
Passed bias filter:                      451  (0.0329871); expected 273.4 (0.02)
Passed Vit filter:                       154  (0.0112639); expected 13.7 (0.001)
Passed Fwd filter:                        40  (0.00292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 2.30u 0.46s 00:00:02.76 Elapsed: 00:00:01.20
# Mc/sec: 1429.83
//
Query:       MMETSP1325-20131115|2508_1  [L=1324]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1324 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       644  (0.0471036); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.96u 0.37s 00:00:02.33 Elapsed: 00:00:01.02
# Mc/sec: 3110.57
//
Query:       MMETSP1325-20131115|2513_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 1088.35
//
Query:       MMETSP1325-20131115|2516_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-13   49.1   0.0    1.3e-06   27.8   0.0    1.5  2  PF13414.1  TPR repeat
    2.8e-07   29.7   0.0      7e-07   28.4   0.0    1.7  2  PF00515.23 Tetratricopeptide repeat
    1.5e-06   27.5   0.0    4.6e-06   26.0   0.0    1.8  2  PF07719.12 Tetratricopeptide repeat
    0.00018   21.3   0.0      0.044   13.8   0.0    2.4  2  PF13431.1  Tetratricopeptide repeat
    0.00029   20.2   0.0    0.00057   19.3   0.0    1.5  1  PF13176.1  Tetratricopeptide repeat
    0.00033   20.9   0.0    0.00096   19.4   0.0    1.7  2  PF13428.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.031   13.9   0.0      0.065   12.9   0.0    1.5  1  PF13181.1  Tetratricopeptide repeat
      0.056   12.6   0.0      0.098   11.8   0.0    1.3  1  PF10516.4  SHNi-TPR
       0.07   12.9   0.0      0.087   12.6   0.0    1.2  1  PF13424.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   8.5e-10   1.3e-06      28      68 ..      19      58 ..      16      59 .. 0.95
   2 !   25.0   0.0   6.4e-09   9.7e-06       5      46 ..      30      71 ..      26      77 .. 0.90

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 8.5e-10
   PF13414.1 28 kAleldpnnaelyynlAlaylklgkdyeeAledyekAleld 68
                 A++l+p +  +++ ++ +y  +  d++ A++dye Al++d
  MMETSP1325-20131115|2516_1 19 DAIRLQPTSVRALCMRGRTYCCMR-DFDNAVKDYETALKID 58
                69*********************8.8*************98 PP

  == domain 2    score: 25.0 bits;  conditional E-value: 6.4e-09
   PF13414.1  5 alkelGnalfkegdydeAieayekAleldpnnaelyynlAla 46
                al  +G  +  ++d+d+A++ ye Al++d n+a++  +lA a
  MMETSP1325-20131115|2516_1 30 ALCMRGRTYCCMRDFDNAVKDYETALKIDGNSAVAKEGLADA 71
                566799****************************99999987 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.6   2.4e+03      27      33 ..      20      26 ..      18      27 .. 0.85
   2 !   28.4   0.0   4.6e-10     7e-07       2      33 ..      29      60 ..      28      61 .. 0.94

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.6
                HHHHHTT CS
  PF00515.23 27 ALelnPn 33
                A++l+P+
  MMETSP1325-20131115|2516_1 20 AIRLQPT 26
                9999997 PP

  == domain 2    score: 28.4 bits;  conditional E-value: 4.6e-10
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALelnPn 33
                +al+ +G +y  + ++d A+++ye AL+++ n
  MMETSP1325-20131115|2516_1 29 RALCMRGRTYCCMRDFDNAVKDYETALKIDGN 60
                89***************************976 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.9   2.9e+03      27      33 ..      20      26 ..      17      27 .. 0.83
   2 !   26.0   0.0     3e-09   4.6e-06       2      33 ..      29      60 ..      28      61 .. 0.94

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 1.9
                HHHH-TT CS
  PF07719.12 27 AleldPn 33
                A++l+P+
  MMETSP1325-20131115|2516_1 20 AIRLQPT 26
                9999997 PP

  == domain 2    score: 26.0 bits;  conditional E-value: 3e-09
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldPn 33
                +al+++G+ y  ++d++ A++++e Al++d n
  MMETSP1325-20131115|2516_1 29 RALCMRGRTYCCMRDFDNAVKDYETALKIDGN 60
                799**************************976 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   2.9e-05     0.044       5      32 ..      20      47 ..      18      49 .. 0.89
   2 ?    5.2   0.0     0.017        26       2      20 ..      51      69 ..      50      76 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2.9e-05
   PF13431.1  5 aleldPnnadaynnLAelllnnGdleeA 32
                a++l+P+++ a+++++++++   d++ A
  MMETSP1325-20131115|2516_1 20 AIRLQPTSVRALCMRGRTYCCMRDFDNA 47
                9******************988888877 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.017
   PF13431.1  2 yekaleldPnnadaynnLA 20
                ye al++d n+a+a   LA
  MMETSP1325-20131115|2516_1 51 YETALKIDGNSAVAKEGLA 69
                9**********99855555 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.7e-07   0.00057       1      29 [.      30      58 ..      30      71 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 3.7e-07
   PF13176.1  1 allnLarlysrlgdyekAielyeraLalt 29
                al+  +r+y+ ++d+++A++ ye aL+++
  MMETSP1325-20131115|2516_1 30 ALCMRGRTYCCMRDFDNAVKDYETALKID 58
                78999*******************76654 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.16   2.4e+02      26      43 ..      19      36 ..      17      37 .. 0.88
   2 !   19.4   0.0   6.3e-07   0.00096       2      43 ..      29      70 ..      28      71 .. 0.94

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.16
   PF13428.1 26 ralalaPddaealllLar 43
                +a++l+P++ +al + +r
  MMETSP1325-20131115|2516_1 19 DAIRLQPTSVRALCMRGR 36
                7999********999887 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 6.3e-07
   PF13428.1  2 eallalarallalGdpdeAiallrralalaPddaealllLar 43
                +al +++r +  + d+d A++ ++ al+ + ++a a   La+
  MMETSP1325-20131115|2516_1 29 RALCMRGRTYCCMRDFDNAVKDYETALKIDGNSAVAKEGLAD 70
                678899*********************************997 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.3e-05     0.065       2      32 ..      29      59 ..      28      61 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.3e-05
                --TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelkp 32
                +a++++G++Y  + d+d+A + +e al+++ 
  MMETSP1325-20131115|2516_1 29 RALCMRGRTYCCMRDFDNAVKDYETALKIDG 59
                67788888888889***************96 PP

>> PF10516.4  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   6.5e-05     0.098      17      30 ..      44      57 ..      43      57 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.5e-05
   PF10516.4 17 FpqAveDlrkaLeL 30
                F+ Av+D+++aL++
  MMETSP1325-20131115|2516_1 44 FDNAVKDYETALKI 57
                9***********98 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.7e-05     0.087       7      34 ..      30      57 ..      24      73 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.7e-05
   PF13424.1  7 ilnnlalvlrrlgdydeAlelyekalel 34
                +l+  + +++ ++d+d A + ye+al++
  MMETSP1325-20131115|2516_1 30 ALCMRGRTYCCMRDFDNAVKDYETALKI 57
                5566788999999999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.67
# Mc/sec: 307.59
//
Query:       MMETSP1325-20131115|2515_1  [L=348]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0025   15.6  14.9     0.0025   15.6  10.3    2.4  2  PF00012.15 Hsp70 protein
  ------ inclusion threshold ------
       0.67    8.9  12.5      0.075   12.0   1.7    2.6  3  PF11904.3  GPCR-chaperone


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6  10.3   3.6e-07    0.0025     511     601 ..      43     164 ..       3     165 .. 0.72
   2 ?    0.1   1.0     0.018   1.2e+02     501     552 ..     197     248 ..     168     298 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 3.6e-07
                 H........................HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSHHHH.......HHHHHHHHHHHHHHT----HHHHHHHHHHHHHCHHHHHHHHH CS
  PF00012.15 511 k........................mvkeaeesaeedkkkkeaieakneleelvyslekkleeekekvseaek.......ekkveeaieelkeelegedkeeieakleelekvvekivekly 601
                 +                           +  + +  d+ +ke+ eakn++e++ y +++ + +e+e+v++ ++        + v+e++e+l++e+ + ++e++ +k++++e ++e+i+e++ 
  MMETSP1325-20131115|2515_1  43 RqelvvtkdhglevakphspveietSLGKLANLQRLDQLRKEKEEAKNSVESYSYAVKNRIYDEEEAVNAVTTeaqreevLALVSETTEWLDDEGFDCETEKYVEKKKKVEGLAEPIFERMA 164
                 144444455555555555555555466677788899*************************9996665544333345555667899********************************9996 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.018
                 T----HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG CS
  PF00012.15 501 seglsedeiekmvkeaeesaeedkkkkeaieakneleelvyslekkleeeke 552
                  ++ ++ ++e + + a++  ee k++++++ea++    l++s++ +l+  ++
  MMETSP1325-20131115|2515_1 197 VTEDERADVEALCSAADKWIEEKKEAQAKVEAHEAPAFLAKSVDVQLKSVAN 248
                 3334555677777777777777777777777777777666666666666544 PP

>> PF11904.3  GPCR-chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.7   1.1e-05     0.075     161     219 ..       5      62 ..       1      81 [. 0.73
   2 ?   -1.4   0.2      0.13   8.9e+02     129     153 ..      88     106 ..      71     157 .. 0.38
   3 ?    3.9   0.1    0.0033        22      84     154 ..     214     306 ..     161     348 .] 0.63

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.1e-05
   PF11904.3 161 sstnpeavtaeeyfspevelkkkrdigrpkeesekkkkfkatlwlsedFPLslkeqllp 219
                 +++n++ v+a +   + +++k k++++++ke++ekkk ++ +l  ++d+ L++++   p
  MMETSP1325-20131115|2515_1   5 TPSNETDVNATDAEAK-TDKKGKKSKKEKKEKKEKKKVYRQELVVTKDHGLEVAKPHSP 62 
                 4445555555433322.344445555555799*******************99776555 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.13
   PF11904.3 129 gksslesglgaekdggasgndtsrk 153
                 +k+s+es++ a k+       ++ +
  MMETSP1325-20131115|2515_1  88 AKNSVESYSYAVKNR------IYDE 106
                 233333333322211......1111 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.0033
   PF11904.3  84 gWr..rqektelvggykakvYdasnveliiksr................tehLseeekkklksgksslesglg......aekdggasgndtsrks 154
                 +W+  ++e + +v+ ++a  + a+ v++  ks                 +++L+  + +   +++   +++++      ++ dg++s+++t+ ++
  MMETSP1325-20131115|2515_1 214 KWIeeKKEAQAKVEAHEAPAFLAKSVDVQLKSVanlvtklsrkpkppppKKVLNATNSTNATDTN--ATASVNatdggeEAADGESSNEKTTPEE 306
                 67655666677789999999999999999999977777777777777776666555444443311..1111111223334444444444444432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1602  (0.117174); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.81u 0.36s 00:00:01.17 Elapsed: 00:00:00.69
# Mc/sec: 1208.60
//
Query:       MMETSP1325-20131115|2517_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 182.77
//
Query:       MMETSP1325-20131115|2512_1  [L=709]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-88  293.2   0.4    9.8e-88  292.8   0.3    1.2  1  PF00290.15 Tryptophan synthase alpha chain
    2.6e-40  138.4   0.2    5.3e-40  137.4   0.1    1.5  1  PF00291.20 Pyridoxal-phosphate dependent enzyme
    6.2e-05   22.2   0.2    0.00015   20.9   0.1    1.6  1  PF01884.12 PcrB family
    7.1e-05   22.0   0.2    0.00028   20.1   0.0    2.0  2  PF00977.16 Histidine biosynthesis protein
  ------ inclusion threshold ------
      0.022   13.2   0.7      0.059   11.8   0.0    2.1  2  PF00701.17 Dihydrodipicolinate synthetase family


Domain annotation for each model (and alignments):
>> PF00290.15  Tryptophan synthase alpha chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.8   0.3   3.6e-91   9.8e-88       3     245 ..      27     271 ..      25     285 .. 0.93

  Alignments for each domain:
  == domain 1    score: 292.8 bits;  conditional E-value: 3.6e-91
                 HHHH------EEB-------HHHHHHHHHHH------SEEE----S--TT---HHHHHHHHHHH----HHHHHHHHHHHG.GG-SS-EEEB--SGGGTTS-....SHHHHH------B-TT-BTTTHHHHHHHHHHTT---BEEE-TTS-HHHHHHHHHH----EEE-S--------SS--TTHHHHHHHHHHH-SS-EE------SHHHHHHHHH------EE--CCCCC--...--SSS----H CS
  PF00290.15   3 klkakkeaafvpfvtagdpdletsleileaLeeagadviElGiPfsdpladGpviqeaslraLakgvtleqvlelveevr.kelevPivlltyynlvlkygiekfvaeakeagvdgliipDlPleeaeelveaaekkgielvflvapttsderlkeivekaegfvYlvsraGvTGarealeeevkelvervkkltavpvavGFGistpeqvkkvaekvadGvivGSalvdkiee..eleekekkle 245
                  +++++eaafvpfvtag+p++++++e+l a++e+gad+iElG+Pfsdp adG++iq+ +++aL+ g+ +++++ +v+e+r k+l++P++l+ yyn+vl+yg++k+v+ea++agvdg+ii+DlP+eea++lv+a++++++++v+l+aptt+der+k ++++a++f+Y vs++GvTG  + + +++ +l+ rv++ t++p+avGFGi + e+vk+va  vad+v+vGSa+ +++++  ++    + ++
  MMETSP1325-20131115|2512_1  27 GCRKRDEAAFVPFVTAGYPSPDDTVELLLAMQEGGADIIELGMPFSDPQADGATIQATNQIALQFGTGIKESMAFVKEARsKGLTTPVILMGYYNPVLQYGMDKLVKEAADAGVDGFIIVDLPPEEAKPLVTACQSQNLAFVPLIAPTTTDERIKYLASAASSFIYTVSVTGVTGSGQGIPKDLGSLIGRVRAQTDLPLAVGFGITSAETVKEVA-GVADAVVVGSAILNAVDKvdASAPPAERAA 271
                 5778899****************************************************************************************************************************************************************************************************************.*************99997433333333333 PP

>> PF00291.20  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.4   0.1   1.9e-43   5.3e-40       4     303 ..     364     687 ..     361     691 .. 0.76

  Alignments for each domain:
  == domain 1    score: 137.4 bits;  conditional E-value: 1.9e-43
                 G-----EEE...----------EEEEEGGGSTTSBCCHCHH.HHHHHCHHHC---EE.EEE--S----HHHHHHHH---EEEEEEETT.S-C..HHHHHHHC---EEEE-TT-SSSGGCHCCHHHH..HHHHHHHHHHS...--TT.-CHHHHHHHHT-HHCCCHHHH......----..-B--------HHHHHHCCCCCTHTT---EEEEEGGG................-TT-..................................S...----T.TT-GGGHHHHSS---E..EE.EE-HHHHHHHHHHHHHH-----------HHHHHHHHHH-..HHTG----EEE CS
  PF00291.20   4 gvgpTPlvrlpsallsklgganvflKlEslnptgSfKdRga.anallralakggkgv.veassGNhGaavAlaaallglkativvpsg.app..ekialiralGaevilvvssvegdyddaaelaekalelvrplkgei...ldqs.ndpdviaGygtiglEileqlg......kpdpdavvvpvGgGgliaGiakglkelilpkirvigvepegs................dalarslragervqldkk...................ttia.glscgtpldgelafelidelvd..evvtvsdeealeavrllarregivvepsgaaalaallraekegslaagkgkrvvv 303
                 + gpTPl  ++ +l  k gga+++lK+E+l +tg++K+  a  +a+l++ + g+ ++ +e+ +G+hG+a+A ++a++gl++t+++ +  + +   ++ ++r+lGa+v+ ++s+     d+  e++++++++vr   + i   ++++  +  v   ++ ig E  +q+        p  dav+++vGgG+++ G+   +    + ++r+igve+ g                 +                +                   ++i+ gl ++    g +  ++  + ++  e++ ++d++ale+ + l++ egi++   +++a+  ++ ++k  +     ++ +++
  MMETSP1325-20131115|2512_1 364 IGGPTPLYLAK-RLTEKCGGAQIWLKREDLAHTGAHKINNAiGQAILAK-RLGKPRIiAETGAGQHGVATATVCAMMGLDCTVYMGEVdTERqkLNVFRMRTLGAKVVPCKSGSRTLKDAINEAMRDWVTNVRDTHYLIgsaVGPHpFPTIVRDLQAVIGREARQQFMdqndgkLP--DAVIACVGGGSNAIGTFYDFIG--DEGTRLIGVEAGGDgveegqlnsatlsmgtPG---------------VlhgartymlqtpegqtakgSSISaGLDYPG--VGPE--HAFLKDAGraEYYPCTDKQALEGFKALCEYEGIIPALETSHAVWYAIELAKTMK----PDQHIII 687
                 579***98766.89999************************87888864.66776676***************************8876777667889***************99999999999999999999988888998888899*******************665644334..46*******************9..89*********665223333322222222222...............1222222222222333333344444555544..4444..3333333356999******************************99998766552....3344544 PP

>> PF01884.12  PcrB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.1   5.5e-08   0.00015     162     219 ..     203     258 ..     183     266 .. 0.82

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 5.5e-08
                 .------H.HHHHHHHCT-SSSEEEE-----SHHHHHHHHTT.-SEEEE--HHHH-H. CS
  PF01884.12 162 GSGaledvpeevikvkkvledarlivGGGiksaEkAkelvkaGADvivvGnvveekkk 219
                 G G ++d+    i  ++  +d +l vG Gi saE+ ke++   AD++vvG ++ ++ +
  MMETSP1325-20131115|2512_1 203 GQGIPKDLGSL-IGRVRAQTDLPLAVGFGITSAETVKEVAGV-ADAVVVGSAILNAVD 258
                 56777777444.4445556899********************.*********988763 PP

>> PF00977.16  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.63   1.7e+03      70      86 ..      83      99 ..      73     115 .. 0.67
   2 !   20.1   0.0     1e-07   0.00028      48     114 ..     196     262 ..     175     274 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.63
                TT-SSEEEEE----SHH CS
  PF00977.16 70 eevfiplqvGgGIrsle 86
                 + +i lq G GI++  
  MMETSP1325-20131115|2512_1 83 ATNQIALQFGTGIKESM 99
                3335999******8654 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 1e-07
                 EEEHHHHHHHHHHHH.HHHHHHHTT-SSEEEEE----SHHHHHHHHH----EEEESHHHHH-THHHHH CS
  PF00977.16  48 vvDLdaakegreanl.dlveeiaeevfiplqvGgGIrsledveelleagadkviigtaavknpelike 114
                 v  ++++ +g +++l +l+ +++ ++++pl vG GI s e+v+e+    ad v++g+a ++  + ++ 
  MMETSP1325-20131115|2512_1 196 VTGVTGSGQGIPKDLgSLIGRVRAQTDLPLAVGFGITSAETVKEVAGV-ADAVVVGSAILNAVDKVDA 262
                 555566667766666689**************************9998.*********9988887765 PP

>> PF00701.17  Dihydrodipicolinate synthetase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.2e-05     0.059      68     132 ..      84     145 ..      78     164 .. 0.84
   2 ?   -3.0   0.1      0.68   1.9e+03      75      96 ..     393     414 ..     392     444 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.2e-05
                 -------------SHHHHHHHHHHHHH------EEE---SS-------HHHHHHHHHC-SS-BEE CS
  PF00701.17  68 kgrvpviagvGsnstkeAiklaqkaeelGadgvlavtPYynkpsqeglyqhfkaiaeatdlpvil 132
                   ++++  g+G    ke+++++++a+ +G+   +++  Yyn + q g+++ +k+ a a+  + i+
  MMETSP1325-20131115|2512_1  84 TNQIALQFGTGI---KESMAFVKEARSKGLTTPVILMGYYNPVLQYGMDKLVKEAADAGVDGFII 145
                 567777777777...***********************************999988766445554 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 0.68
                 ------SHHHHHHHHHHHHH-- CS
  PF00701.17  75 agvGsnstkeAiklaqkaeelG 96 
                 a++G+   ++Ai  a  a++lG
  MMETSP1325-20131115|2512_1 393 AHTGAHKINNAIGQAILAKRLG 414
                 7788888888887777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.04u 0.35s 00:00:01.39 Elapsed: 00:00:00.53
# Mc/sec: 3205.69
//
Query:       MMETSP1325-20131115|2519_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 406.93
//
Query:       MMETSP1325-20131115|2518_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       528  (0.0386191); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.35s 00:00:00.98 Elapsed: 00:00:00.57
# Mc/sec: 1297.34
//
Query:       MMETSP1325-20131115|2520_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 610.84
//
Query:       MMETSP1325-20131115|2521_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.039   13.5   0.0      0.044   13.3   0.0    1.1  1  PF09158.5 Bacteriophage T4 MotA, C-terminal


Domain annotation for each model (and alignments):
>> PF09158.5  Bacteriophage T4 MotA, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.3e-06     0.044      14      44 ..      44      74 ..      34      80 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.3e-06
                HHHHH---EEEEEEETTEEEEEESS------ CS
   PF09158.5 14 elveenvelkeveiyrsnyevilekrteGir 44
                + v+  ++l ++++ r n  v ++krt+ +r
  MMETSP1325-20131115|2521_1 44 ATVQATLDLTKIDEVRANVPVSFQKRTDLYR 74
                56788899*******************9888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|2523_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 620.23
//
Query:       MMETSP1325-20131115|2522_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.8e-115  385.1   0.0   2.1e-115  384.9   0.0    1.0  1  PF00316.15 Fructose-1-6-bisphosphatase
     0.0024   17.1   0.0      0.006   15.8   0.0    1.6  2  PF00459.20 Inositol monophosphatase family


Domain annotation for each model (and alignments):
>> PF00316.15  Fructose-1-6-bisphosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  384.9   0.0    3e-119  2.1e-115       5     321 ..      22     338 ..      18     340 .] 0.95

  Alignments for each domain:
  == domain 1    score: 384.9 bits;  conditional E-value: 3e-119
  PF00316.15   5 rfileeqkeeaatgelkevlsslaeaaktiaskirkaglaellglagatnvtGdeqkklDvladdilieaLkaseavkvlaSEEeeelvvlegekegkyavaiDPlDGSSnidtnvsvGTifsifrrasedeastidvlrpGreqvAagyviYGpstalvltlgkGvneftlDldlgefilvkeevkipeegkifsinegnarkwdkavrkyidklkeekegsrkkyslRyigslVadvhrillkgGiflypgdkkyekgkLRllyEaaPlaflieqagGkatdgk.....kriLdlvpkklhqrtpivlGskdeverveel 321
                 +f+++    e+a++el   l+++++ +k+i +++rkag+a+l+gla ++n++Gd  kklD+l+d+++i+ Lk+s+a+++l+SEE+ee++v+ + ++g+++va+DPlDGSSnid+nvs GTifs+f+++se e++  d+l+pG+++v agy++YG+++ l++t+ +Gv+ ftlD ++gef+ + + +   ++++i+s negn++ wd+++++ ++  k++++g+ k+ys+Ry+gs+V+dvhr++l+gGiflyp+dkk++kgkLRllyE  P+a +ieqagG a++g      +riLd+vp+++h+r pi++G++ + ++v +l
  MMETSP1325-20131115|2522_1  22 SFVMK----EHANQELVVFLNAMQTSLKFIVRAVRKAGIADLYGLANTQNSSGDDVKKLDLLSDEVMIDCLKKSGACALLVSEEQEEPIVVPEATRGSLCVAFDPLDGSSNIDCNVSTGTIFSVFQKTSEGEPTAADILKPGTDMVCAGYCMYGSAIDLCITFMNGVHRFTLDDSIGEFVYIGPLTFPAKSKTIYSCNEGNYQLWDENIQQSVELFKNPSDGT-KPYSARYVGSMVSDVHRTILYGGIFLYPADKKSTKGKLRLLYEGLPMASIIEQAGGVASTGMfqgsvQRILDVVPEHIHDRCPIIMGCERDTSKVLAL 338
                 55554....47999*****************************************************************************999***************************************999***********************************************9888888999*****************************9.***********************************************************9854444689*********************99999876 PP

>> PF00459.20  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   8.7e-07     0.006      26      97 ..      57     128 ..      30     158 .. 0.82
   2 ?   -2.7   0.0      0.36   2.5e+03     159     203 ..     138     180 ..     129     187 .. 0.72

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 8.7e-07
                 -HCCHSEEEH..-HHHHHHHHHHHHHHHHHHHHHHSTTSEEEHCHHHHC--B...---.EEEEEEEEE--HH CS
  PF00459.20  26 nslvveekeksgeedlvtaadkaveelilealaakfpgdkilgeetlaagekselgesgltwvvDPiDGTkn 97 
                 ++l   +++++++ d v+++d  + e++++ l+++     +++ee+ +++   e ++ +l++  DP+DG+ n
  MMETSP1325-20131115|2522_1  57 ADLYGLANTQNSSGDDVKKLDLLSDEVMIDCLKKSGACALLVSEEQEEPIVVPEATRGSLCVAFDPLDGSSN 128
                 44444445578999************************************988889999**********987 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.36
                 CBEE--SSSSSCHHHCCCHHHHCCHHCCHEEEBE-SHHHHHHHHH CS
  PF00459.20 159 latlfavssvkdtseaellekvlsavsspgvrrvgssalklalvA 203
                 +++ f+  s+ +++ a++l+    +v++    ++gs a++l+ + 
  MMETSP1325-20131115|2522_1 138 IFSVFQKTSEGEPTAADILKPGTDMVCAG-YCMYGS-AIDLCITF 180
                 55666667777788888899999999999.566655.58888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.41s 00:00:01.03 Elapsed: 00:00:00.65
# Mc/sec: 1253.48
//
Query:       MMETSP1325-20131115|2524_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 210.29
//
Query:       MMETSP1325-20131115|2525_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00023   21.1   0.2    0.00051   20.0   0.0    1.7  2  PF13499.1  EF-hand domain pair
     0.0003   19.7   0.0     0.0013   17.7   0.0    2.2  2  PF00036.27 EF hand
    0.00056   19.0   0.0     0.0023   17.0   0.0    2.1  2  PF13202.1  EF hand
     0.0011   18.5   0.0     0.0049   16.5   0.0    2.2  2  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
       0.33   10.9   3.3       0.18   11.7   0.2    1.9  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
        3.8    7.8   9.7        1.1    9.6   0.6    2.3  2  PF13600.1  N-terminal domain of unknown function (DUF4140)
        3.9    6.8  12.5        2.8    7.3   1.6    2.5  2  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.6e-07   0.00051       2      54 ..      83     135 ..      58     137 .. 0.92
   2 ?   -3.5   0.0       5.5   1.1e+04      36      46 ..     180     190 ..     167     192 .. 0.75

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.6e-07
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngd 54 
                 +++ F + D+++dg ++  eL+++l    + +  + + e++ +++k+lD+ g+
  MMETSP1325-20131115|2525_1  83 VRQSFMQADSNKDGVVTIMELQKWLESRIELKEGKITAEFAAQLVKDLDTSGN 135
                 4667**********************9999999*****************997 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 5.5
   PF13499.1  36 eevrevldyif 46 
                 ee+re+l++i+
  MMETSP1325-20131115|2525_1 180 EEKRESLEAII 190
                 67777877776 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   6.8e-07    0.0013       1      27 [.      82     108 ..      82     110 .. 0.93
   2 ?   -2.7   0.0       2.2   4.3e+03      16      24 ..     146     154 ..     144     158 .. 0.75

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 6.8e-07
                 HHHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealk 27 
                 e+++ F  +D ++dG ++  E++++l+
  MMETSP1325-20131115|2525_1  82 EVRQSFMQADSNKDGVVTIMELQKWLE 108
                 78999******************9987 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 2.2
                 EBEHHHHHH CS
  PF00036.27  16 kIsfeEfke 24 
                 +++ +Ef +
  MMETSP1325-20131115|2525_1 146 FVTASEFEA 154
                 789999976 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.2e-06    0.0023       4      23 ..      86     105 ..      83     107 .. 0.88
   2 ?   -3.1   0.0       2.8   5.4e+03      14      19 ..     116     121 ..     116     121 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.2e-06
                 HHHHH--S----B-HHHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELkr 23 
                  F ++D N+DG +++ EL++
  MMETSP1325-20131115|2525_1  86 SFMQADSNKDGVVTIMELQK 105
                 49****************97 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 2.8
                 --B-HH CS
   PF13202.1  14 GkIsre 19 
                 GkI++e
  MMETSP1325-20131115|2525_1 116 GKITAE 121
                 9**987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.5e-06    0.0049       2      27 ..      83     108 ..      82     121 .. 0.91
   2 ?   -2.8   0.0         4   7.7e+03      15      23 ..     145     153 ..     144     154 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.5e-06
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 +r+ F++ D ++dG +++ EL+++L 
  MMETSP1325-20131115|2525_1  83 VRQSFMQADSNKDGVVTIMELQKWLE 108
                 6888********************97 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 4
                 --B---HHH CS
   PF13405.1  15 GkidaeELr 23 
                  +++a+E+ 
  MMETSP1325-20131115|2525_1 145 DFVTASEFE 153
                 689999995 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   9.1e-05      0.18      27      78 ..      57     105 ..      42     131 .. 0.81
   2 ?   -0.7   0.1      0.67   1.3e+03      12      42 ..     152     181 ..     147     195 .. 0.44

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.1e-05
   PF10591.4  27 lkerdeekehseelekeaekknskeckeaveWkFnqlDtnkdkvlsksElap 78 
                 +   +  +++  e e+e e+++ +++  +v+  F q D+nkd+v++  El++
  MMETSP1325-20131115|2525_1  57 A---AALRKEADEAEAEVEREKRDSYLAEVRQSFMQADSNKDGVVTIMELQK 105
                 2...33334557888899999999*************************987 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.67
   PF10591.4  12 fpeRlrdwlknvlaqlkerdeekehseelek 42 
                 f +R+++  +  ++  ++ + ek + +ele+
  MMETSP1325-20131115|2525_1 152 FEARVKEIARREAMAQEKMAREK-EAAELEE 181
                 55555555544333333332222.1222222 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   1.7     0.084   1.6e+02      60      95 ..      45      80 ..      34      89 .. 0.65
   2 ?    9.6   0.6   0.00056       1.1      47      93 ..     150     197 ..     107     200 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.084
   PF13600.1 60 lqekdadaaseelaeleaelraledelarleaekea 95
                l+  +ad+  e+ a+l++e +++e+e++r + +   
  MMETSP1325-20131115|2525_1 45 LEAATADELMEQAAALRKEADEAEAEVEREKRDSYL 80
                444556777777788888888888777776665555 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00056
   PF13600.1  47 n...atvlsvsvrrrdlqekdadaaseelaeleaelraledelarleaek 93 
                 +   a+v +++ r++ +qek   a+++e aele++ ++le+ +++  ++k
  MMETSP1325-20131115|2525_1 150 SefeARVKEIARREAMAQEK--MAREKEAAELEEKRESLEAIIDASIQKK 197
                 23449999999999998854..6899999***********9988877665 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   1.6    0.0014       2.8      28      60 ..      52      83 ..      46      87 .. 0.89
   2 ?    4.2   2.0     0.013        26      15      48 ..     158     191 ..     153     195 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0014
  PF04977.10 28 alqaelaklkaeneeLeaevkdLksdedyieeq 60
                +l ++ a+l++e +e eaev++  + ++y++e+
  MMETSP1325-20131115|2525_1 52 ELMEQAAALRKEADEAEAEVERE-KRDSYLAEV 83
                6778999****************.6****9985 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.013
  PF04977.10  15 gllalyqlkqeiaalqaelaklkaeneeLeaevk 48 
                  + ++ ++ qe  a ++e a+l++++e+Lea ++
  MMETSP1325-20131115|2525_1 158 EIARREAMAQEKMAREKEAAELEEKRESLEAIID 191
                 677888999*********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1295  (0.0947191); expected 273.4 (0.02)
Passed bias filter:                      646  (0.0472499); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.62u 0.41s 00:00:01.03 Elapsed: 00:00:00.65
# Mc/sec: 921.68
//
Query:       MMETSP1325-20131115|2526_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-27   95.6   0.0    2.8e-27   95.2   0.0    1.2  1  PF00067.17 Cytochrome P450


Domain annotation for each model (and alignments):
>> PF00067.17  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.2   0.0     2e-31   2.8e-27     146     321 ..       4     188 ..       1     189 [] 0.85

  Alignments for each domain:
  == domain 1    score: 95.2 bits;  conditional E-value: 2e-31
                 HHHHHHHHHHHHHS----.TSSSHHHHHHHHHHHHHH....HHHCHGGGTTSHCH.HHHHHSHHH.....HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSS-SHHHHHHHCTTTSSSSSSS-HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHC.CCTS--HHHHTTS- CS
  PF00067.17 146 skaaldvigsilFgarfdlledeklselvkaveelss....llskssvqllllfp.llkylptkl.....lrklkeavkklkdlldklieerretldsakksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevl.gdkreptyddlqkl 321
                 ++ ++dv ++i+Fg+ +++++ +++  + +a++++ +     +s++ ++++ lf     ++++ +     ++++ke +k+++++ +++i  +r+  ++      d+l+ +l++k e +ge ++sd+el+  v+++++aG dTt+ +lsw+L+eLa+ Pevqek+r E+ +v   + + pt++++++l
  MMETSP1325-20131115|2526_1   4 FRLTMDVFTEIAFGVDLQSITRDEPHPFATAFDDIQDcsekRFSNPLWRICRLFGlNGEIMFDGMgfrfgEKTIKEGTKVVNQFSKEVIASKRRLASEGATMGPDLLSRFLDTK-EDDGE-EMSDKELRDVVMNFMIAGRDTTACALSWTLFELADKPEVQEKIRAELVQVCgDEIDAPTFEQVAEL 188
                 789*********************9999999999988555567778888888887555566666533333467788899999999999999999999998899**********8.66665.***************************************************555569999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 924.31
//
Query:       MMETSP1325-20131115|2529_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 379.06
//
Query:       MMETSP1325-20131115|2530_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-28   98.5   1.3    4.6e-28   98.2   0.9    1.0  1  PF00109.21 Beta-ketoacyl synthase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00109.21  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.2   0.9   3.4e-32   4.6e-28      65     241 ..      25     215 ..       5     217 .. 0.84

  Alignments for each domain:
  == domain 1    score: 98.2 bits;  conditional E-value: 3.4e-32
                 ...S-GGGG--HHHHC...CS-HHHHHHHHHHHHHHHH----....HTTGCEEEB------.....HH......HHHCCCH.---...-TTS-TTHHHHHS----CCCHHTTTT-----BEEE-GGGHH.HHHHHHH.HHHH----SEEEE--------HHHHHHHHCTT.-S-ST..SGGGS--TTB...------ CS
  PF00109.21  65 ldiddfdaaffgispreaeamDpqqrlaleaawealedagldpeslegsdrvgvfiGsgig.....dy......aelqaldeagg..kprkvspyatgaalpsviagrisyalglrGpsvtvdtacsSs.lvalhaavqslregeadlalaGGvelllspetfaafsaag.llspd..grckafdpfa...dGfvlG 241
                 l++ddf+  ++++s r    m   +++a +a+++a+e++gl++++ +g++ ++ ++G g +     ++      +  ++  +++g  + + v py +++++ s++++ +  a++l+G+s+++++acs++ ++++ a+ ++++ g+ ++a aG  e   ++e +a f+a+g l+++   +++ka+++f+   dGfv++
  MMETSP1325-20131115|2530_1  25 LTEDDFKSLIDRKSLR---FMGDNAKFAFVAMQRAIEHSGLTEDQYQGPQ-TAAILGQGGTslidcTEavgkvlEGVEKGFNDEGfnRMKGVGPYRVTKTMGSTVSAVLTTAFKLQGMSYSISSACSTGaHCIGTAM-EQIQLGKHSMAFAGSGE-NECWEFTAMFDAMGaLSTSYndDPTKASRAFDktrDGFVIA 215
                 34799***********...************************9999999.*********9776542266666633333333333765677777888888*****************************77777776.*****************.9999999*******66665599*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 1129.71
//
Query:       MMETSP1325-20131115|2531_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 357.10
//
Query:       MMETSP1325-20131115|2532_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        81  (0.00592452); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 189.71
//
Query:       MMETSP1325-20131115|2533_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-12   45.6   0.0    5.4e-12   45.5   0.0    1.0  1  PF10409.4 C2 domain of PTEN tumour-suppressor protein


Domain annotation for each model (and alignments):
>> PF10409.4  C2 domain of PTEN tumour-suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.0   3.9e-16   5.4e-12       3     111 ..      10     110 ..       8     111 .] 0.86

  Alignments for each domain:
  == domain 1    score: 45.5 bits;  conditional E-value: 3.9e-16
                 ---EEEEEEEEES----TT-----EEEEEE----EEEE----GGGS----TT---EEEEEEEEE---EEEEEEEEEEE--S--EEEEEEE------TT--EEEEEGGG- CS
   PF10409.4   3 pkrlelksvileriPnfktrggckpkvevyngkkklfkeekstkknkedrakefivkedkpvpveGDvrveffhkgskklskekifrvwFNTsFiekeenvltlpkneL 111
                 +++  ++sv++++ P    +gg++p ++++ g +   k+++   k + ++++ ++++++  +pv +  +v f+ kg  + +k+k++ +wF+TsF+  e+ vl   k+++
  MMETSP1325-20131115|2533_1  10 ERPKVITSVRMRTTP----KGGYEPNFKIFCGGTCY-KSSDMIPKVEYKNEDLIVLDIP-DCPVVDETLVVFYTKG-ALGKKKKMLSFWFHTSFVG-EDGVLVVDKKNM 110
                 5678899********....7899*************.6666666666666666666666.***************9.59****************9.999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 554.16
//
Query:       MMETSP1325-20131115|2535_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-20   72.4   0.1    3.1e-20   72.0   0.0    1.1  1  PF01853.13 MOZ/SAS family


Domain annotation for each model (and alignments):
>> PF01853.13  MOZ/SAS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   0.0   2.3e-24   3.1e-20     106     188 ..       1      82 [.       1      83 [. 0.96

  Alignments for each domain:
  == domain 1    score: 72.0 bits;  conditional E-value: 2.3e-24
                 HHHHHHTT----B-SS------HHHHHHHHHHHHHHHHHC-SCE-EEHHHHHHHH--THHHHHHHHHHTT-EEE----EEEE- CS
  PF01853.13 106 yelsrkegkigsPekPLsdlgllsyrsyWkskllelllklkkekkvtikelsketgiavediistleslelikekkeqelivl 188
                 yels+ke k+gsPekPLsdlg  +yrsyW+ ++l++l   ++ ++++i ++sk+t+i+++di  +l+++ l+k+ ++q++i++
  MMETSP1325-20131115|2535_1   1 YELSKKEFKVGSPEKPLSDLGYAAYRSYWAYEVLKVLDVCEE-SELSIMDISKQTSIMADDISGVLQQIGLLKYVHGQYVICM 82 
                 9************************************97777.58*********************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 728.49
//
Query:       MMETSP1325-20131115|2537_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.061   13.3   0.1      0.075   13.0   0.1    1.2  1  PF01437.20 Plexin repeat


Domain annotation for each model (and alignments):
>> PF01437.20  Plexin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   5.5e-06     0.075      13      24 ..      13      24 ..      10      33 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 5.5e-06
                HSTGTTEEEBTT CS
  PF01437.20 13 aardpyCgWcsd 24
                a++ pyCgW+s+
  MMETSP1325-20131115|2537_1 13 ASPPPYCGWSSN 24
                56777*****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 184.34
//
Query:       MMETSP1325-20131115|2539_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 268.98
//
Query:       MMETSP1325-20131115|2538_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 873.97
//
Query:       MMETSP1325-20131115|2542_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 549.17
//
Query:       MMETSP1325-20131115|2543_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 459.71
//
Query:       MMETSP1325-20131115|2545_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 304.54
//
Query:       MMETSP1325-20131115|2546_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 668.46
//
Query:       MMETSP1325-20131115|2540_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.32s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1007.56
//
Query:       MMETSP1325-20131115|2544_1  [L=321]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      9e-24   83.7   0.8    1.5e-23   83.0   0.0    1.7  2  PF04417.7 Protein of unknown function (DUF501)
  ------ inclusion threshold ------
       0.02   14.6   0.0      0.038   13.7   0.0    1.4  1  PF05946.7 Toxin-coregulated pilus subunit TcpA
      0.049   14.2   0.2       0.17   12.5   0.0    2.0  3  PF08832.5 Steroid receptor coactivator


Domain annotation for each model (and alignments):
>> PF04417.7  Protein of unknown function (DUF501)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   0.0   3.4e-27   1.5e-23       4     138 ..     100     242 ..      97     243 .. 0.93
   2 ?   -2.3   0.3      0.72   3.3e+03      75      91 ..     286     302 ..     275     316 .. 0.47

  Alignments for each domain:
  == domain 1    score: 83.0 bits;  conditional E-value: 3.4e-27
   PF04417.7   4 rcasgnPtVvktaplledgkpfptlfwLtcpelkkavsrlEaegvikeleekl...dedeelaeayeaaherylakReellseeerellerkg...avealkkvgvGGiadad..kvkCLHalvAhaLag.egknpvGelvlel 138
                 +c++g P+ +  +p + ++kp+ +l +Ltcp+l++av+++Eaeg+++ ++++l   ++ +e +ea++   + + + R++l+se+e e++++++     e++ + g++G++ ++  +vkCLHa++A++L + + +n +G++v e+
  MMETSP1325-20131115|2544_1 100 QCPYGFPQAILLRP-VGKNKPVSGLIRLTCPHLVAAVDEFEAEGGVASMNRELvggARGPEWQEALQGINDAHRQLRRALTSEAEAERVKERFgeaGAESFFNSGIAGMSPTKldDVKCLHAQLADSLLRgRDNNKIGSAVEEE 242
                 79************.9999**********************************555578999*****************************9988888999999*****9877668**************9*********9886 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.72
   PF04417.7  75 akReellseeereller 91 
                 ++R++  +e+er+  +r
  MMETSP1325-20131115|2544_1 286 NARRSQEKEKERAARRR 302
                 23333333333333333 PP

>> PF05946.7  Toxin-coregulated pilus subunit TcpA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   8.4e-06     0.038      21      80 ..     231     290 ..     228     304 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 8.4e-06
   PF05946.7  21 dalnifsakrnsaankgfaievdgLtqeqCkslitsvgdmfeyvavknsaaaaladltdf 80 
                 d+ +i+sa +++  ++g  i  +g   eqC    ++  d ++yv +kn+ +  + +    
  MMETSP1325-20131115|2544_1 231 DNNKIGSAVEEELRARGVDIGGNGCCYEQCDYNRAETKDTWSYVPIKNKQKLRTRNARRS 290
                 56789999999999***********************************99887755444 PP

>> PF08832.5  Steroid receptor coactivator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.7e-05      0.17      37      65 ..      35      63 ..      15      69 .. 0.72
   2 ?   -3.6   0.0         3   1.4e+04       3      17 ..     171     185 ..     170     194 .. 0.72
   3 ?   -3.1   0.0       2.7   1.2e+04      30      53 ..     268     293 ..     263     301 .. 0.44

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.7e-05
                XXXXXXXXXXXXXXX--XTTHHHHHHHH- CS
   PF08832.5 37 gvssstsgnsssassLkEkHkILHrLLQn 65
                ++  st++n+   ss +E+H  LHr L  
  MMETSP1325-20131115|2544_1 35 QRGHSTTSNPPAPSSTTERHETLHRALPP 63
                34455666666777***********8865 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 3
                 XXHHHHHHHTXXXXX CS
   PF08832.5   3 hkKLlqLLttkaeel 17 
                 h+ L + Lt++ae +
  MMETSP1325-20131115|2544_1 171 HRQLRRALTSEAEAE 185
                 667777788888765 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 2.7
                 XXXXXXX..XXXXXXXXXXXXXXX-- CS
   PF08832.5  30 kDslavt..gvssstsgnsssassLk 53 
                 kD  + +  + + +  + ++  s  k
  MMETSP1325-20131115|2544_1 268 KDTWSYVpiKNKQKLRTRNARRSQEK 293
                 55555552222222223333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       752  (0.0550029); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.37s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 1424.50
//
Query:       MMETSP1325-20131115|2548_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|2550_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-23   80.6   0.1    1.2e-22   79.8   0.0    1.4  1  PF00784.12 MyTH4 domain
  ------ inclusion threshold ------
       0.16   10.4   1.0        3.6    6.0   0.7    2.0  1  PF12297.3  Ellis van Creveld protein 2 like protein
       0.23   10.8   1.3       0.69    9.3   0.2    2.0  2  PF08465.5  Thymidine kinase from Herpesvirus C-terminal


Domain annotation for each model (and alignments):
>> PF00784.12  MyTH4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   2.7e-26   1.2e-22       5      65 ..      57     117 ..      52     118 .] 0.96

  Alignments for each domain:
  == domain 1    score: 79.8 bits;  conditional E-value: 2.7e-26
  PF00784.12   5 dlvqkilkqgikreeLRDEiycQiikQltknpskesaekgWeLltlltstfpPSeellkyl 65 
                  l+q+il++g+++  LRDEiy Qi+kQlt+np   s +kgW+++ +++stfpPS e+  yl
  MMETSP1325-20131115|2550_1  57 TLAQDILEKGLQNLRLRDEIYMQIMKQLTSNPTADSIAKGWQVMCMCVSTFPPSSEFEDYL 117
                 689******************************************************9998 PP

>> PF12297.3  Ellis van Creveld protein 2 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.7   0.00078       3.6     170     195 ..      58      83 ..       3     105 .. 0.54

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00078
   PF12297.3 170 iskdviaillknlvskgelsrqvekr 195
                 + +d++   l+nl+ + e+ +q+ k+
  MMETSP1325-20131115|2550_1  58 LAQDILEKGLQNLRLRDEIYMQIMKQ 83 
                 33445555555555555555555555 PP

>> PF08465.5  Thymidine kinase from Herpesvirus C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.16   7.3e+02      17      32 ..       3      18 ..       3      18 .. 0.78
   2 ?    9.3   0.2   0.00015      0.69      12      19 ..      75      82 ..      74      84 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.16
   PF08465.5 17 ilknsaIKtravdWaa 32
                il+ +  K  +++W+a
  MMETSP1325-20131115|2550_1  3 ILQKRKLKDGMLKWTA 18
                567777788899**98 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00015
   PF08465.5 12 eIYtQilk 19
                eIY+Qi+k
  MMETSP1325-20131115|2550_1 75 EIYMQIMK 82
                8******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 614.72
//
Query:       MMETSP1325-20131115|2551_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.076   12.8   0.6       0.21   11.4   0.0    2.0  3  PF10531.4 SLBB domain


Domain annotation for each model (and alignments):
>> PF10531.4  SLBB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.49   6.7e+03      29      37 ..       2      10 ..       2      18 .. 0.60
   2 ?   -0.7   0.0     0.087   1.2e+03      29      37 ..      89      97 ..      83     102 .. 0.80
   3 ?   11.4   0.0   1.5e-05      0.21       6      37 ..      96     128 ..      95     136 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 0.49
                T-----S.. CS
   PF10531.4 29 AGGltdday 37
                AGG   +++
  MMETSP1325-20131115|2551_1  2 AGGTPARGR 10
                555555576 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.087
                T-----S.. CS
   PF10531.4 29 AGGltdday 37
                AGG+++ + 
  MMETSP1325-20131115|2551_1 89 AGGGMGGGA 97
                899998876 PP

  == domain 3    score: 11.4 bits;  conditional E-value: 1.5e-05
                 --.-S----EEE----BHHHHHHTT-----S.. CS
   PF10531.4   6 Ge.VkrPgvyevpiGttlsdlleqAGGltdday 37 
                 G+ V + +vy vp  +t++ ll+  GG +++a 
  MMETSP1325-20131115|2551_1  96 GAlVGHDKVYAVPHHSTVFALLKVLGGYDPKAL 128
                 888999***********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 744.95
//
Query:       MMETSP1325-20131115|2553_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        88  (0.00643651); expected 273.4 (0.02)
Passed bias filter:                       71  (0.0051931); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 244.33
//
Query:       MMETSP1325-20131115|2555_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|2552_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-12   46.8  10.6    2.4e-06   26.8   0.0    3.9  4  PF02493.15 MORN repeat
     0.0038   17.2   0.0     0.0064   16.5   0.0    1.3  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.014   15.1   0.2      0.091   12.5   0.0    2.2  2  PF13405.1  EF-hand domain
      0.049   12.8   0.0        0.8    9.0   0.0    2.4  2  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0     7e-10   2.4e-06       1      23 []       3      25 ..       3      25 .. 0.98
   2 !   17.7   0.3   5.3e-07    0.0018       1      19 [.      26      44 ..      26      47 .. 0.92
   3 !    7.6   0.0   0.00089         3       1      10 [.      50      59 ..      50      66 .. 0.87
   4 ?   -2.7   0.1       1.6   5.5e+03       3      14 ..      70      81 ..      70      82 .. 0.66

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 7e-10
                EE-EEETTEEE-EEEB------- CS
  PF02493.15  1 YeGeWknGkrhGkGvytwpdGdr 23
                Y+G W nGkr G Gv+t ++Gdr
  MMETSP1325-20131115|2552_1  3 YDGSWANGKRTGLGVLTMANGDR 25
                9********************97 PP

  == domain 2    score: 17.7 bits;  conditional E-value: 5.3e-07
                EE-EEETTEEE-EEEB--- CS
  PF02493.15  1 YeGeWknGkrhGkGvytwp 19
                YeG+W ++k++G G+y + 
  MMETSP1325-20131115|2552_1 26 YEGHWLDDKKEGPGRYFYR 44
                ****************876 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.00089
                EE-EEETTEE CS
  PF02493.15  1 YeGeWknGkr 10
                YeGeW+++ +
  MMETSP1325-20131115|2552_1 50 YEGEWVDDIP 59
                *******976 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 1.6
                -EEETTEEE-EE CS
  PF02493.15  3 GeWknGkrhGkG 14
                G + +  + G+G
  MMETSP1325-20131115|2552_1 70 GSFEDYPMGGQG 81
                666666677777 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.9e-06    0.0064       2      65 ..     143     202 ..     142     203 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.9e-06
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 lk++F ++D   +g+++  +Ll ll+ +g +  +  v+e+    +  l  +   +l+f+Ef+ +
  MMETSP1325-20131115|2552_1 143 LKKVFAAYDDRDSGFVTCGDLLGLLQSAGVNVAPATVEEL----VVSLEADSATQLTFAEFVDI 202
                 899**************************88888888887....77777776679999999875 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.7e-05     0.091       2      29 ..     143     169 ..     142     171 .. 0.89
   2 ?   -0.8   0.0      0.51   1.7e+03      16      25 ..     193     202 ..     192     208 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.7e-05
                 HH---GCC-------B---HHHHHHH.H CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrks 29 
                 l+++F ++D+  +G+++  +L+ +L+ s
  MMETSP1325-20131115|2552_1 143 LKKVFAAYDDRDSGFVTCGDLLGLLQ-S 169
                 799******999*********99998.5 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.51
                 -B---HHHHH CS
   PF13405.1  16 kidaeELrda 25 
                 +++++E++d+
  MMETSP1325-20131115|2552_1 193 QLTFAEFVDI 202
                 6899***997 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00023       0.8       2      27 ..     143     168 ..     142     170 .. 0.92
   2 ?    1.0   0.0     0.083   2.8e+02      17      27 ..     194     204 ..     193     206 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00023
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 lk++F+ +D   +G+++  +++ +l+
  MMETSP1325-20131115|2552_1 143 LKKVFAAYDDRDSGFVTCGDLLGLLQ 168
                 79******************999886 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.083
                 BEHHHHHHHHH CS
  PF00036.27  17 IsfeEfkealk 27 
                 ++f Ef+++ +
  MMETSP1325-20131115|2552_1 194 LTFAEFVDIAA 204
                 89*****9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 1082.97
//
Query:       MMETSP1325-20131115|2557_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-13   48.0   0.0    9.2e-13   47.9   0.0    1.0  1  PF01593.19 Flavin containing amine oxidoreductase


Domain annotation for each model (and alignments):
>> PF01593.19  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   6.7e-17   9.2e-13     391     449 ..       3      58 ..       1      59 [. 0.96

  Alignments for each domain:
  == domain 1    score: 47.9 bits;  conditional E-value: 6.7e-17
                 TTT---ECCHBHHHHHHHHHHHHS-BBSSEEE--GTT-TTTTTS---TTT---HHHHHH CS
  PF01593.19 391 plargsysyvsvgssgddrpalaepvgprlffAGehtsrgypgtveGAvlSGlraAari 449
                 + +r++y++v+ ++   +rp++++p+ p + +AG++ s+++ g++eGAvlSG+ aA+ i
  MMETSP1325-20131115|2557_1   3 RVPRSVYAAVPGRNR--YRPSQKTPI-PHFTLAGDWASQKFLGSMEGAVLSGKLAAEVI 58 
                 679************..********9.8****************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|2556_1  [L=415]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-99  332.4  16.5    1.7e-99  332.4  11.4    2.2  2  PF06098.6  Radial spoke protein 3


Domain annotation for each model (and alignments):
>> PF06098.6  Radial spoke protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  332.4  11.4  1.2e-103   1.7e-99       4     285 ..      38     319 ..      35     325 .. 0.92
   2 ?    0.5   2.9     0.015   2.1e+02     173     206 ..     322     355 ..     311     360 .. 0.77

  Alignments for each domain:
  == domain 1    score: 332.4 bits;  conditional E-value: 1.2e-103
   PF06098.6   4 animvDrrVvrgntyaqeallvsaekdsi..qrqkearqrallkkrkkelqnakivetpeevegrkhievqtekyLeeltdkieeadaetqtdafldrpptpkyvpkktGiDveTqieegeLFdFdleVePileVLVgktleqallEvleeeElaelrkqqeqfeerRnaelaetqrleeaerrrqeEkerrkkqekerkekeketaeklaarafakkylsdlvkkvlssledsgyfrdpveeevetdflPwlveevakeikkkvearelldelieevvkkkkk 285
                  nim+DrrVvrgntya++  +++a++++   + ++e + +  l++rk+e    k   tp++v+gr h +vqte +Leeltd++ e+da+tqt+afldrpp+p++vp+k+G D  Tqi+    F+Fd eV+PileVLVgktl+ ++lEv+eeeEla +rk q++fe+ Rnael+e+qrle++  rr++Ek+rr kqeker   ++e +ek+aar+fak+yls+l  +v+++le+ g f+dpv++ev  dflPwl++ v +e+++ ++a++l+d+l   +++k+ +
  MMETSP1325-20131115|2556_1  38 NNIMFDRRVVRGNTYAAQVVTQNATQEMErlRSENERAMKRELQRRKREA--GKAPRTPPPVDGRVHMDVQTETFLEELTDRPIEVDADTQTEAFLDRPPSPLFVPAKSGVDKGTQIDTDQVFNFDAEVKPILEVLVGKTLQVSMLEVMEEEELAAIRKRQDEFEQMRNAELMEVQRLEAEATRRFAEKQRRIKQEKERTRLQQELKEKVAARSFAKSYLSELHSNVFDALEETGHFYDPVRKEVSDDFLPWLMDSVVTEVDSVQTAHALADDLLTVALQKAIE 319
                 59****************99999999988554444444344444444443..33346*************************************************************************************************************************************************************************************************************************9988877654 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.015
   PF06098.6 173 laetqrleeaerrrqeEkerrkkqekerkekeke 206
                  aet   e+++ r  +Ek+r++++e er   e +
  MMETSP1325-20131115|2556_1 322 AAETAIYEAEQARVAAEKKRLEEEEAERVALEAA 355
                 456777889999999********99999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1534  (0.1122); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.35s 00:00:01.23 Elapsed: 00:00:00.54
# Mc/sec: 1841.64
//
Query:       MMETSP1325-20131115|2559_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   17.6   0.1     0.0015   17.6   0.1    1.1  1  PF01056.13 Myc amino-terminal region
     0.0099   15.3   0.0      0.013   14.9   0.0    1.3  1  PF01764.20 Lipase (class 3)
  ------ inclusion threshold ------
      0.022   13.9   0.1      0.025   13.7   0.1    1.2  1  PF05432.6  Bone sialoprotein II (BSP-II)
       0.33   11.2   3.4       0.48   10.7   2.3    1.2  1  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   4.3e-07    0.0015     209     249 ..      55      96 ..      16     154 .. 0.74

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 4.3e-07
  PF01056.13 209 elvlrtspnsssssged.seseeeeeeeeeeeeeeeiDvvtv 249
                 +l+ +    sss sg+  ++s++e e +eeeeeeee Dv  +
  MMETSP1325-20131115|2559_1  55 NLKPKLDKRSSSISGKSwPKSDSEAEADEEEEEEEEGDVGVL 96 
                 2333333346666665525679999999********999655 PP

>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   3.8e-06     0.013      62      77 ..     152     167 ..     111     169 .] 0.85

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.8e-06
                 TTSEEEEE-------H CS
  PF01764.20  62 pdykivvtGHSLGGal 77 
                 +++++vvtGHSLG+++
  MMETSP1325-20131115|2559_1 152 KKFNLVVTGHSLGAGI 167
                 5789**********87 PP

>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   7.2e-06     0.025     117     150 ..      59      92 ..      23     136 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 7.2e-06
   PF05432.6 117 qlpkkaGdigkkaakedesdedeeeeeeeeeeee 150
                 +l+k++ +i  k+  + +s+ + +eeeeeeee +
  MMETSP1325-20131115|2559_1  59 KLDKRSSSISGKSWPKSDSEAEADEEEEEEEEGD 92 
                 4666666666666666666666666554444433 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.3   0.00014      0.48      66      84 ..      77      94 ..      64      99 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00014
  PF00428.14 66 aeeekkeeeeeEeedddmG 84
                 e+e+ eeee Eee+ d G
  MMETSP1325-20131115|2559_1 77 SEAEADEEEE-EEEEGDVG 94
                3333333333.57888988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       558  (0.0408133); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 880.40
//
Query:       MMETSP1325-20131115|2561_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-10   40.1   7.4    2.8e-10   39.7   5.1    1.2  1  PF00397.21 WW domain
  ------ inclusion threshold ------
        1.7    8.8   9.2        2.2    8.4   6.4    1.2  1  PF07941.6  Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   5.1   4.1e-14   2.8e-10       1      31 []       9      38 ..       9      38 .. 0.89

  Alignments for each domain:
  == domain 1    score: 39.7 bits;  conditional E-value: 4.1e-14
                ---SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  1 lppgWeersddddGrvYYyNheTgetqWekP 31
                lppgW    dd+ G +YYyN +T+et+W+kP
  MMETSP1325-20131115|2561_1  9 LPPGWLPFEDDT-GDWYYYNENTQETTWDKP 38
                8****9655467.*****************9 PP

>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   6.4   0.00033       2.2      27      60 ..      51      83 ..      39      87 .] 0.59

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00033
                HHHHHHHTTSSTTXXXHHHHSSXSXXXXXXXXXX CS
   PF07941.6 27 arererlahsraaaaaavaaataaveGeGGsGGG 60
                ar   r a + aaaa a+aaa   ++  GG GGG
  MMETSP1325-20131115|2561_1 51 ARPAARAAPAAAAAAPAAAAARPKMDL-GGGGGG 83
                566666666666666666655555554.444554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 453.22
//
Query:       MMETSP1325-20131115|2565_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.2   4.7      0.014   15.2   3.2    2.2  2  PF11938.3 TLR4 regulator and MIR-interacting MSAP


Domain annotation for each model (and alignments):
>> PF11938.3  TLR4 regulator and MIR-interacting MSAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   3.2     1e-06     0.014      46     150 ..      43     143 ..      24     144 .. 0.79
   2 ?   -2.8   0.1      0.36     5e+03      78      90 ..     170     182 ..     160     191 .. 0.47

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1e-06
   PF11938.3  46 ylarSelrlvEllegvCekmkdyklekekstsrrvakkmsetketlkelvekgvkveasaeskelkkaCerllEehEdeleelfkkeqee..edlskkLCeeeskaC 150
                 y ++ e ++ El+ ++C+  +d ++    ++  ++ k+ s + ++++ +       e ++e  +++kaC  + +e+ ++l+el+ k++ +  e+++   C++ ++ C
  MMETSP1325-20131115|2565_1  43 YHKVGEDEFNELTLNICDPDTDEGEWVSMQDIIQSKKGASVKLKQEEYM------GECRRECRTIEKACAAVFDEYREDLAELLWKNEPKtlEKMASRVCTKWASVC 143
                 4478888999999999999888888888887777777777666666655......668999***************999999866555555999******9998888 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.36
   PF11938.3  78 rrvakkmsetket 90 
                 r++ k m++ +++
  MMETSP1325-20131115|2565_1 170 REMEKTMNQLSQK 182
                 2333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       677  (0.0495173); expected 273.4 (0.02)
Passed bias filter:                      516  (0.0377414); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.52
# Mc/sec: 1110.62
//
Query:       MMETSP1325-20131115|2566_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.72
# Mc/sec: 332.83
//
Query:       MMETSP1325-20131115|2562_1  [L=483]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-48  164.7   0.0    2.9e-48  164.4   0.0    1.1  1  PF01266.19 FAD dependent oxidoreductase
    2.9e-06   27.0   0.0    7.5e-06   25.7   0.0    1.8  1  PF13450.1  NAD(P)-binding Rossmann-like domain
    8.6e-06   24.8   0.1    1.4e-05   24.2   0.1    1.3  1  PF01946.12 Thi4 family
    0.00017   21.6   0.0     0.0095   15.8   0.0    2.2  1  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
    0.00072   19.3   0.0       0.03   14.1   0.0    2.1  2  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
    0.00098   17.9   0.0     0.0026   16.5   0.0    1.6  1  PF00890.19 FAD binding domain
    0.00099   18.7   0.0     0.0021   17.7   0.0    1.5  1  PF13454.1  FAD-NAD(P)-binding
     0.0023   16.8   0.0     0.0042   15.9   0.0    1.4  1  PF05834.7  Lycopene cyclase protein
  ------ inclusion threshold ------
      0.012   14.5   0.0        1.3    7.8   0.0    2.4  2  PF01494.14 FAD binding domain
      0.035   14.3   0.0        2.5    8.4   0.0    2.4  2  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
      0.045   11.8   0.0      0.068   11.2   0.0    1.2  1  PF06039.10 Malate:quinone oxidoreductase (Mqo)
      0.055   13.5   0.0       0.11   12.5   0.0    1.5  1  PF07499.8  RuvA, C-terminal domain


Domain annotation for each model (and alignments):
>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.4   0.0   2.5e-51   2.9e-48       1     357 [.      67     448 ..      67     449 .. 0.87

  Alignments for each domain:
  == domain 1    score: 164.4 bits;  conditional E-value: 2.5e-51
                 EEEEE----HHHHHHHHHHH..TT-EEEEEESS.STTSSCGGGS-EEE-SSTCHCSCHHHHHHHHHHHHHHHHH..HHHT....SSTSBBCCEHCEEECSSHHHHHHHHHHHHHHCHTTTTEEEE-HHHHHHHSTTBT.TTT--................EEEETTEEEEEHHHHHHHHHHHHHHG--EEEESEEEEEEEEETTCEE.EEEEES....EEEEEEEE----THHHHHCCGTCCT.....TEEEEEEEEEEEE-TCCHSCCCEEEEEEEECGGTSEEEEEET..TEEEE-EEESCEEESCBHHHH.HHHCCTHHH.HHHHHHHHHHHSGGGGGSEEEEEEEEEEEE.ETTSCSBEEEBTTETTEEEEE--G----TTTTTHHHHHHH CS
  PF01266.19   1 dvviiGgGivGlstAyeLar..rglkVtllekg.diasgaSgrngglihagllkerdprllrlalesldllrel..aaet....gidvdfrrtgvldlasdeeeleelerlaerarangldvellsaeevrereplls.pdlkg................glfypddgqvdpaklvkalaraaeelGveiiegtkVtglereggrvsgvetedg...siradkvvlAaGawsskllkllgldl.....pirpvrgqvlvtepltdelaaavilgpvavldargvfvlpre..gevlvgttdgrldrgataeessgedvdvdle.vdelleaaakllpqlkdaeilrawaGlrpv.tpdglpvigevpevpglyvatGhsghGftlapaaGkllae 357
                 dv+i+G+Gi G  tAy+L+r  + l+V ++e+   ++ g+Sg ++g+++a    ++ ++ ++lal ++d ++++     t      + +f +tg l++  ++++    e+ +er++++g+++e+++a++v +r+p l  +++                  ++++++ g++d+  ++  + + + + G  i+  ++V +++++g++v+g+++ d    ++ a +vv++aG+w+ kl k+   d        +p+r qv +   + + l+ ++ +++ +   ++g++++pr+   ++++g+  +r+  +   ++ ++  + +d++  ++ l  + ++lp+l +   ++ ++ +++v   d +pv+g+ ++v+gly+a+G sghGf+lapa+G +la+
  MMETSP1325-20131115|2562_1  67 DVAIVGAGIWGMNTAYHLKRrdPSLNVQVFEQApALGYGSSGYSTGFLRAY---YSFDETMQLALDGIDAYKKWgeY--TqlgdAAESKFTETGALWMLGYAKSEN--EQMVERLSKFGVGSEVMDADDVIKRWPVLDcSPFPEftddgeliekdygefsAVHEHGCGHMDSNLCLSDMKKVLDREGIPIHMSSPVASFDISGSKVQGIVLGDAvgtRVSATTVVNCAGPWATKLNKRSARDDvktstTSLPTRIQVGHKHIEGQYLDLPF-VADGYG--GSGIYFMPRRqnSQLVFGSVAHRFESEIVDPDNYN--TSLDPDvKEDYLTCLFHRLPNLPTHGQIHGFSHMYTVnQDDVHPVVGP-SDVEGLYLAYGESGHGFKLAPAIGSMLAQ 448
                 8*******************99999**************************...566679**************552..422223347899********9999999..99************************99997444333445555666666777***************************************************8876656999***************99988778999988999999998888888887676.344344..48999999999888999977788866666666644..666666677****************************889999*****.6**************************98 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   6.6e-09   7.5e-06       1      35 [.      70     106 ..      70     136 .. 0.83

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 6.6e-09
   PF13450.1   1 IvGaGlsGlvaAylLaka..gkdvlvlekrdrlGGra 35 
                 IvGaG+ G+ +Ay+L+++    +v+v+e+++ lG  +
  MMETSP1325-20131115|2562_1  70 IVGAGIWGMNTAYHLKRRdpSLNVQVFEQAPALGYGS 106
                 9****************955569**********9433 PP

>> PF01946.12  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1   1.2e-08   1.4e-05      16      97 ..      64     148 ..      50     172 .. 0.80

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 1.2e-08
                 TEEEEEEE-------HHHHHHHTS..TS-EEEEESSS-------------..--EEEETTTHHHHHH-----EE-SSEEEES-HHH CS
  PF01946.12  16 aesDvvivGaGssGltaayylakk..dlkvailerklsiGGGawlGGqlf..skvvvrkeakelLdelgiryedegdyvvvkdaae 97 
                 +  Dv+ivGaG  G+ +ay l ++   l+v ++e+  ++G G+ +   +f   +    +  ++ Ld ++ +y++ g+y    daae
  MMETSP1325-20131115|2562_1  64 VTCDVAIVGAGIWGMNTAYHLKRRdpSLNVQVFEQAPALGYGSSGYSTGFlrAYYSFDETMQLALDGID-AYKKWGEYTQLGDAAE 148
                 678********************9888*************99987666661144455566666667666.5777888888877776 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   8.4e-06    0.0095       1     137 [.      69     290 ..      69     318 .. 0.60

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 8.4e-06
   PF13738.1   1 lVvGAGaaGlafadnlleegat.pliivDrnakpGghwl........kaysfvrlhqpsffssdfgvndleklsldsspkwrikaelasgeeisa........................................................................................yledvarrlglkvrlstrvteveregdr.fevrvtdg..revrakalvlatgav 137
                 ++vGAG  G+  a++l  ++ + ++ ++++    G + +         +ysf+  +q            l+   +d ++kw   ++l +++   +                                                                                         +++v++r+g++++ s++v ++ + g++   + + d    +v+a+ +v + g +
  MMETSP1325-20131115|2562_1  69 AIVGAGIWGMNTAYHLKRRDPSlNVQVFEQAPALGYGSSgystgflrAYYSFDETMQ------------LALDGIDAYKKWGEYTQLGDAA---EskftetgalwmlgyakseneqmverlskfgvgsevmdaddvikrwpvldcspfpeftddgeliekdygefsavhehgcghmdsnlclsDMKKVLDREGIPIHMSSPVASFDISGSKvQGIVLGDAvgTRVSATTVVNCAGPW 290
                 69**************99977545*****8887776655000000013444433333............3333333333333222222222...11223333444444444444444446666777777777777777777777777777777777777777777777777777777777777777777777777777777777776655533344444355777777777777755 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   2.6e-05      0.03       1      62 [.      67     138 ..      67     190 .. 0.77
   2 ?    3.2   0.0     0.056        63      61     127 ..     231     297 ..     202     316 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.6e-05
                 SEEEE----HHHHHHHHHH..HTTSEEEEECSSSSSTBTSGGHHHHHHHHHHHHHHHHHHTSH.........H CS
                 xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........x RF
   PF07992.9   1 dvviiGgGpaGlsaakdla..qkglkvaliekeggtcvnrgclpkkllvevaegreeleelal.........k 62 
                 dv+i+G+G+ G+++a +l+  +  l+v ++e+ +   + + + ++ +l++ + ++e+++ lal         +
  MMETSP1325-20131115|2562_1  67 DVAIVGAGIWGMNTAYHLKrrDPSLNVQVFEQAPALGYGSSGYSTGFLRAYYSFDETMQ-LALdgidaykkwG 138
                 79*****************99999**********9999999999999999999988876.3443465555441 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.056
                 H.....HHHHHHHHCTCEEEHCHEEEEEETTTTEEEEEEEEEEEEEETEEEEEEESEEEE----B----TGC CS
                 x.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9  61 l.....kvvdelekagieilleknvvkidsgskkvvqeagavkadekgkgrdikydklviAtGarprtlgip 127
                       ++ + l+++gi i++++ v++ d+  +kv   +g v  d+   g ++++ ++v + G ++++l+  
  MMETSP1325-20131115|2562_1 231 SnlclsDMKKVLDREGIPIHMSSPVASFDISGSKV---QGIVLGDAV--GTRVSATTVVNCAGPWATKLNKR 297
                 0456677788899***************8887754...333333334..77899999999999998887544 PP

>> PF00890.19  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.3e-06    0.0026       1     226 [.      67     310 ..      67     326 .. 0.64

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.3e-06
                 SEEEE-------HHHHHHHCHTT..-EEEE-SS-CCGS.GGGG-----B---.......GGGSS.S-HHHHHHHHHH--....----.-HHHHHHHHC.CHHHHHHHHHC------B..GC--.......-B-EE------S-......-EE-.STT-......---HHHHHHHHHHHC-TTEEEE-SEEEEE--BG--BB---EEEETTT-SEEEEEES.EEEE-----GG.............GSSSBSS- CS
  PF00890.19   1 DvvViGsGlAGlaAAleaaeagl..kvavvekeqetgg.atawsqGgidavls...peqkkagikdspdlhrtdtlkal....dela.dqplveafve.aapeavdeleelgvpfsr..tedg.......pvdlrelGglsat......rtlhdaadarretlvtghallarllesareagkvdfqerhradeLivedgrvtGvvvenprsgrevrirakaavvlatgGfgrdrrallkellgaaaeaettna 226
                 Dv ++G+G+ G+  A+ ++++    +v v e++++ g  ++ +s G + a+ s   ++q ++++ d  +++ ++t+ +        +  + ++  +++ +  ++v+ l ++gv      +          ++d +++ +++ +       ++   a+++    + +  l+   ++++++++ + ++ +++++++ + + +v+G+v+    +   +r+ a+  vv  +g +     +l k+ ++  ++ +tt++
  MMETSP1325-20131115|2562_1  67 DVAIVGAGIWGMNTAYHLKRRDPslNVQVFEQAPALGYgSSGYSTGFLRAYYSfdeTMQLALDGIDAYKKWGEYTQLGDaaesKFTEtGALWMLGYAKsENEQMVERLSKFGVGSEVmdA--DdvikrwpVLDCSPFPEFTDDgeliekDYGEFSAVHEHGCGHMDSNLCLSDMKKVLDREGIPIHMSSPVASFDISGSKVQGIVLG---DAVGTRVSAT-TVVNCAGPWAT---KLNKRSARDDVKTSTTSL 310
                 9******************965335***********988*********998742113333333336666666666533233322222223333334444666666666666555555431..1345555555555555555555555554444333433333446778888888888888889999999999999988899999999...4444567788.77777777775...444444444455555555 PP

>> PF13454.1  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.8e-06    0.0021       1      39 [.      69     105 ..      69     127 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.8e-06
   PF13454.1   1 aIiGaGprGlsvlerLlarakkekpleitvfdpspa.gag 39 
                 aI+GaG+ G+ ++ +L +r   + +l+++vf+++pa g g
  MMETSP1325-20131115|2562_1  69 AIVGAGIWGMNTAYHLKRR---DPSLNVQVFEQAPAlGYG 105
                 8******************...799********9987766 PP

>> PF05834.7  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   3.7e-06    0.0042       1      36 [.      67     102 ..      67     111 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 3.7e-06
   PF05834.7   1 DlvivGaGlAglllAlrlreakpglrvllidagpkl 36 
                 D++ivGaG  g+  A++l+++ p+l+v + +++p l
  MMETSP1325-20131115|2562_1  67 DVAIVGAGIWGMNTAYHLKRRDPSLNVQVFEQAPAL 102
                 9*****************************999987 PP

>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0011       1.3       2      22 ..      66      86 ..      65      90 .. 0.92
   2 ?    4.2   0.0     0.014        16     115     173 ..     236     292 ..     209     368 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0011
                ECEEE--------HHHHHHHH CS
  PF01494.14  2 tdVlIVGaGpaGlmlallLse 22
                +dV+IVGaG  G+ +a  L++
  MMETSP1325-20131115|2562_1 66 CDVAIVGAGIWGMNTAYHLKR 86
                9***************99987 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.014
                 CCHHHHHHC--EEESS-CECCSCCCHHHHHHCCCCEE----EEEEEECEEE-------H CS
  PF01494.14 115 riLvehaeerglqvrfktevlsleqdeegvtavvrdketgeeetvrakYlvGaDGgrSt 173
                  ++ + + ++g+ ++++  v s+   +++v+  v++ + g++  v+a  +v + G + t
  MMETSP1325-20131115|2562_1 236 SDMKKVLDREGIPIHMSSPVASFDISGSKVQGIVLGDAVGTR--VSATTVVNCAGPWAT 292
                 5778888999***************************98887..***********9876 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0    0.0022       2.5       2      34 ..      68     102 ..      67     108 .. 0.85
   2 ?    3.3   0.0     0.087        99      46      77 ..     238     270 ..     228     273 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0022
                 EEEE---HHHHHHHHHHHHTT..SEEEEEESSSSS CS
  PF00070.22   2 vvvvGGGyiGlElAaalaklg..kkVtvierrdrl 34 
                 v++vG+G  G+  A  l++     +V+v+e ++ l
  MMETSP1325-20131115|2562_1  68 VAIVGAGIWGMNTAYHLKRRDpsLNVQVFEQAPAL 102
                 89***************887755799999988776 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.087
                 HHHHHHHTTEEEETTEEEEEEEESEEEEE.EEE CS
  PF00070.22  46 lqkklekngievllntkveeiegsadgve.vkl 77 
                 ++k l ++gi +++ + v++++ s+++v+ ++l
  MMETSP1325-20131115|2562_1 238 MKKVLDREGIPIHMSSPVASFDISGSKVQgIVL 270
                 67888999**************98888766665 PP

>> PF06039.10  Malate:quinone oxidoreductase (Mqo)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.9e-05     0.068       5      47 ..      66     108 ..      63     112 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.9e-05
  PF06039.10   5 vdvvliGaGimsatlgvlLkelePeweielverldkvaeessn 47 
                  dv ++GaGi +   +  Lk+ +P+++++++e+  + +  ss 
  MMETSP1325-20131115|2562_1  66 CDVAIVGAGIWGMNTAYHLKRRDPSLNVQVFEQAPALGYGSSG 108
                 69*******************************9999888875 PP

>> PF07499.8  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   9.7e-05      0.11       9      40 ..     156     191 ..     155     192 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9.7e-05
   PF07499.8   9 ALlaLGYkekeAekAvakvle....dpgasveelIR 40 
                 AL  LGY ++e e++v+++++     + ++++++I+
  MMETSP1325-20131115|2562_1 156 ALWMLGYAKSENEQMVERLSKfgvgSEVMDADDVIK 191
                 8999******************99888899999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.89u 0.36s 00:00:01.25 Elapsed: 00:00:00.78
# Mc/sec: 1483.90
//
Query:       MMETSP1325-20131115|2569_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.37s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 235.11
//
Query:       MMETSP1325-20131115|2570_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.59
# Mc/sec: 755.46
//
Query:       MMETSP1325-20131115|2571_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|2564_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1318.00
//
Query:       MMETSP1325-20131115|2567_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-17   63.3   0.6    2.6e-17   62.4   0.4    1.5  1  PF00276.15 Ribosomal protein L23
    3.2e-14   52.5   8.5      8e-14   51.2   5.9    1.7  1  PF03939.8  Ribosomal protein L23, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00276.15  Ribosomal protein L23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.4   0.4   3.7e-21   2.6e-17       3      91 ..      91     169 ..      89     170 .. 0.96

  Alignments for each domain:
  == domain 1    score: 62.4 bits;  conditional E-value: 3.7e-21
  PF00276.15   3 iikapiitekalnlleeenkyvFkVdkkanKteikdaveeifgVk..vvkvntlilkgkvkRngqvlgrkksyKkaivtLeeg.dilplask 91 
                 iik+p++te a++++e++n++vF+Vd+kanK++ik+av e+ ++   v kvntli++      gq        Kka+v+L+++ d+l++a++
  MMETSP1325-20131115|2567_1  91 IIKYPLTTESAMKKIEDNNTLVFIVDVKANKRQIKQAVSELHDMAggVQKVNTLIRP-----DGQ--------KKAYVRLTQDfDALDVANR 169
                 8*******************************************666**********.....***........**********99**99987 PP

>> PF03939.8  Ribosomal protein L23, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   5.9   1.2e-17     8e-14       4      54 .]      34      83 ..      32      83 .. 0.94

  Alignments for each domain:
  == domain 1    score: 51.2 bits;  conditional E-value: 1.2e-17
   PF03939.8  4 aakaakakKavkkGakakktrKirtsvtFrRPkTlklprkPkypRksvpsr 54
                +akaaka+  +kkGa +k    +rt+v+F RPkTl l ++PkypRks+p+r
  MMETSP1325-20131115|2567_1 34 TAKAAKAATQIKKGAGSKD-VTKRTKVHFFRPKTLTLDKSPKYPRKSMPDR 83
                68************99988.789*************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 901.24
//
Query:       MMETSP1325-20131115|2574_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.7   3.0       0.12   11.6   2.1    1.1  1  PF05308.6 Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.1   8.7e-06      0.12     161     222 ..      54     112 ..      22     115 .] 0.54

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.7e-06
   PF05308.6 161 esvslslkssstasvvisdpteepelevppppppPpPlpavslqqsasaielikerkekksa 222
                 e ++ + ++ ++ ++v  dp +++   v+  pppPpP    + +++    + +k+ k+ k+a
  MMETSP1325-20131115|2574_1  54 EGMEEPWQP-DAVATVFMDPAKAEA--VTVAPPPPPPKAEKKAKKEGGDAKAAKKAKKAKKA 112
                 233333333.455555566656554..45556666666666666666666666666654444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       567  (0.0414716); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.43s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 492.11
//
Query:       MMETSP1325-20131115|2578_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-08   34.0   0.0    1.3e-08   33.9   0.0    1.0  1  PF02896.13 PEP-utilising enzyme, TIM barrel domain
    0.00087   18.6   0.0     0.0022   17.3   0.0    1.6  2  PF13404.1  AsnC-type helix-turn-helix domain
     0.0091   15.2   0.0      0.013   14.7   0.0    1.3  1  PF13412.1  Winged helix-turn-helix DNA-binding
  ------ inclusion threshold ------
      0.081   12.2   0.0       0.12   11.7   0.0    1.3  1  PF00309.15 Sigma-54 factor, Activator interacting domain (AID)


Domain annotation for each model (and alignments):
>> PF02896.13  PEP-utilising enzyme, TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   3.8e-12   1.3e-08      85     123 ..       1      58 []       1      58 [] 0.96

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 3.8e-12
                 --S-GGGGSGGC...................HHHH--S-TT----THHHHCCSHHHHH CS
  PF02896.13  85 lDiggdkelpel...................veepeevNPmlGfRgirlalsepelfe 123
                 lD+++++++p+                    ++ ++e NPmlG+Rg+rl++++pe++e
  MMETSP1325-20131115|2578_1   1 LDPPLHEFVPHAadteladsvglsveecqatISRLAESNPMLGLRGCRLGITSPEIIE 58 
                 7**********99*****************9999*********************975 PP

>> PF13404.1  AsnC-type helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   6.6e-07    0.0022      20      41 ..      14      35 ..      10      36 .. 0.91
   2 ?   -1.4   0.0      0.44   1.5e+03      25      34 ..      47      56 ..      46      58 .] 0.76

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 6.6e-07
   PF13404.1 20 yaeLAeavGlSettvlrRirrL 41
                 +eLA+ vGlS  ++++ i rL
  MMETSP1325-20131115|2578_1 14 DTELADSVGLSVEECQATISRL 35
                58******************99 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.44
   PF13404.1 25 eavGlSettv 34
                 ++G++ +++
  MMETSP1325-20131115|2578_1 47 CRLGITSPEI 56
                5899999887 PP

>> PF13412.1  Winged helix-turn-helix DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   3.9e-06     0.013      21      44 ..      15      38 ..      10      39 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 3.9e-06
   PF13412.1 21 reLAerlglSlgtvnrrlkrLeek 44
                +eLA+ +glS+  +++ + rL e+
  MMETSP1325-20131115|2578_1 15 TELADSVGLSVEECQATISRLAES 38
                79*******************996 PP

>> PF00309.15  Sigma-54 factor, Activator interacting domain (AID)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.6e-05      0.12      26      45 ..      23      42 ..      22      45 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.6e-05
  PF00309.15 26 lsslELeeeieeeleeNPlL 45
                ls +E +++i + +e+NP+L
  MMETSP1325-20131115|2578_1 23 LSVEECQATISRLAESNPML 42
                7999***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.29u 0.43s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 248.19
//
Query:       MMETSP1325-20131115|2576_1  [L=298]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-14   54.7   0.0    1.7e-14   54.0   0.0    1.3  1  PF00005.22 ABC transporter
    1.8e-10   41.1   0.0    1.6e-06   28.2   0.0    2.1  2  PF13304.1  AAA domain
     0.0056   16.0   0.1      0.012   15.0   0.1    1.5  1  PF13555.1  P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.026   14.2   0.0      0.074   12.7   0.0    1.6  2  PF01935.12 Domain of unknown function DUF87
       0.11   11.4   0.1        2.2    7.2   0.0    2.2  2  PF01078.16 Magnesium chelatase, subunit ChlI
       0.14   12.5   0.0       0.26   11.6   0.0    1.5  1  PF08477.8  Miro-like protein
       0.22   10.4   0.0        3.2    6.6   0.0    2.0  2  PF13175.1  AAA ATPase domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.0   8.9e-18   1.7e-14       1     117 [.      28     147 ..      28     148 .. 0.91

  Alignments for each domain:
  == domain 1    score: 54.0 bits;  conditional E-value: 8.9e-18
                 HHHHHHHTTSS------EEE-...--BGGGB-HHHHH.EEEE-------.--BHHHHHH----S--.....-HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievd.ndrkdlesdkleklr.igyipqdpllfpeltvrenldmakeekk.....tdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPt 117
                 ST + +l + + pt+g+ e++ +   ++ +d  ++++ +g++pqd  l+  l++ + l+++ +         d+ +  +l ++gl++ ++k  +++LSgG+k+r++   al+ +p++++LDEP 
  MMETSP1325-20131115|2576_1  28 STTISMLIRRTLPTSGDAEINgH---SVLKDCSSAFKcLGVVPQDDILWDTLSCYDHLAFFARLRGipehaVDELCVTTLIEMGLTKQASK-WAQSLSGGMKRRLCTGIALIGNPEVVVLDEPS 147
                 9********************33...344455566779********************99988766999999999****************.*******************************7 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.1   0.00016      0.31       3      19 ..      18      34 ..      16      58 .. 0.82
   2 !   28.2   0.0   8.1e-10   1.6e-06     236     298 ..     119     177 ..     103     180 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00016
   PF13304.1  3 viiGpNgsGKSnlLkal 19
                ++ GpNg+GKS+ ++ l
  MMETSP1325-20131115|2576_1 18 GLLGPNGAGKSTTISML 34
                689*********99887 PP

  == domain 2    score: 28.2 bits;  conditional E-value: 8.1e-10
   PF13304.1 236 dlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHS 298
                 +lS G+kr l    al+ ++    v+++DEp +gL+P + r l++ l  + +    +++TTHS
  MMETSP1325-20131115|2576_1 119 SLSGGMKRRLCTGIALIGNP---EVVVLDEPSAGLDPLARRILWNALLRTMD-ERAMVLTTHS 177
                 68****************99...99*******************77744444.489******9 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   6.2e-06     0.012      22      40 ..      13      31 ..       4      50 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 6.2e-06
   PF13555.1 22 kgkntlltGasGsGKSTll 40
                +g+++ l G++G+GKST +
  MMETSP1325-20131115|2576_1 13 RGESFGLLGPNGAGKSTTI 31
                466889***********98 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.8e-05     0.074      24      48 ..      15      39 ..       7      56 .. 0.84
   2 ?   -2.3   0.0       1.4   2.7e+03      87     125 ..     212     250 ..     191     282 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.8e-05
  PF01935.12 24 rHlAilgsTGsGKSntvavLleell 48
                ++++ lg  G+GKS+t++ L+++ l
  MMETSP1325-20131115|2576_1 15 ESFGLLGPNGAGKSTTISMLIRRTL 39
                5899******************988 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.4
  PF01935.12  87 dtelkinpwsldpeelldlleelkddepaaeaqrsvlee 125
                  +e++i++++ +   ++d++ e  ++ + a+++++++  
  MMETSP1325-20131115|2576_1 212 GYEVSIRLKEASAARVADVVREFREYHSGASVLDEYVTG 250
                 556677777777777777777766666666666655544 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0    0.0011       2.2      11      53 ..       3      46 ..       1      61 [. 0.77
   2 ?    1.9   0.0     0.047        91       6      57 ..     121     174 ..     117     183 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0011
  PF01078.16 11 akraleiaaaGgHnlllvGppGsGKtmlakrl.psllpplseee 53
                a r l +a+  g ++ l+Gp G+GK+  ++ l    lp   ++e
  MMETSP1325-20131115|2576_1  3 AVRGLSLAVNRGESFGLLGPNGAGKSTTISMLiRRTLPTSGDAE 46
                5678899999999999*********9876665156777766666 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.047
  PF01078.16   6 kGqeeakraleiaaaGgHnlllvGppGsGKtmlakrl..psllpplseeealev 57 
                  G  + +    ia +G+ +++++  p +G   la+r+  ++ll  ++e+ ++ +
  MMETSP1325-20131115|2576_1 121 SGGMKRRLCTGIALIGNPEVVVLDEPSAGLDPLARRIlwNALLRTMDERAMVLT 174
                 56667777788*************************844578888877766544 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00013      0.26       3      41 ..      18      55 ..      16      77 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00013
   PF08477.8  3 vvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavk 41
                 ++G  g+GKs+ +s l++++ p  +   ei+g+ + ++
  MMETSP1325-20131115|2576_1 18 GLLGPNGAGKSTTISMLIRRTLP-TSGDAEINGHSVLKD 55
                6899*******************.888999999988776 PP

>> PF13175.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.05        98      27      44 ..      19      36 ..      11      57 .. 0.83
   2 ?    6.6   0.0    0.0016       3.2     372     411 ..     140     177 ..     133     179 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.05
   PF13175.1 27 iiGeNgsGKttILealek 44
                + G Ng+GK+t ++ l++
  MMETSP1325-20131115|2576_1 19 LLGPNGAGKSTTISMLIR 36
                5799*********99944 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0016
   PF13175.1 372 IlliDEPeahlhptlqkellefLkelakknniqiiitTHs 411
                 ++++DEP a l+p +++ l + L   ++      ++tTHs
  MMETSP1325-20131115|2576_1 140 VVVLDEPSAGLDPLARRILWNALLRTMD--ERAMVLTTHS 177
                 99**************************..9999*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.46s 00:00:00.99 Elapsed: 00:00:00.61
# Mc/sec: 1170.68
//
Query:       MMETSP1325-20131115|2581_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1935  (0.14153); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.38s 00:00:01.14 Elapsed: 00:00:00.61
# Mc/sec: 946.76
//
Query:       MMETSP1325-20131115|2582_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-16   60.3   0.6    1.3e-16   60.0   0.4    1.0  1  PF01603.15 Protein phosphatase 2A regulatory B subunit (B56 family)
  ------ inclusion threshold ------
      0.052   12.5   0.1       0.06   12.3   0.0    1.1  1  PF04548.11 AIG1 family
       0.09   11.8   0.0        0.1   11.6   0.0    1.1  1  PF05435.6  Phi-29 DNA terminal protein GP3
      0.096   12.3   0.0       0.12   12.0   0.0    1.2  1  PF01183.15 Glycosyl hydrolases family 25


Domain annotation for each model (and alignments):
>> PF01603.15  Protein phosphatase 2A regulatory B subunit (B56 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.4   3.9e-20   1.3e-16       2      73 ..      52     123 ..      51     124 .. 0.96

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 3.9e-20
  PF01603.15   2 lpslkdvsskefkdlflkklklcsvifdFsdpekdlkekeiKteaLkeildlvsnskivkklteellqelvk 73 
                 lp l+dv+  ++++lflkkl+lc+v fdF+d++++ ++k+iK+++L e++d+v+ns   k +tee+++++ +
  MMETSP1325-20131115|2582_1  52 LPALRDVPATKREELFLKKLELCTVTFDFEDQTSEEAKKNIKRTTLLELVDYVNNSTGQKLFTEECMPHITN 123
                 899*****************************************************98999******99875 PP

>> PF04548.11  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.8e-05      0.06     159     202 ..      79     122 ..      55     125 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.8e-05
                 EEETT.----HHHHHHHHHHHHHHHHHHHT-------HHHHHHH CS
  PF04548.11 159 lfnnktaskeekeeQvkellelveaivkenggkpytnelyekik 202
                  f+ +t+++++k+  +  llelv+ + +++g+k +t+e+  +i 
  MMETSP1325-20131115|2582_1  79 DFEDQTSEEAKKNIKRTTLLELVDYVNNSTGQKLFTEECMPHIT 122
                 466778999999999**********************9887776 PP

>> PF05435.6  Phi-29 DNA terminal protein GP3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     3e-05       0.1     190     248 ..      38      96 ..      16     111 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 3e-05
   PF05435.6 190 vegsfnsddeadelveklkkiPaddfyelfliydeisfeefdsegelveaseailekir 248
                  +gs n +++  e +  l+ +Pa    elfl   e+    fd e++++e ++ ++++  
  MMETSP1325-20131115|2582_1  38 QQGSVNGMNAFKEELPALRDVPATKREELFLKKLELCTVTFDFEDQTSEEAKKNIKRTT 96 
                 5789999999999999********************************99999998854 PP

>> PF01183.15  Glycosyl hydrolases family 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.5e-05      0.12      64     123 ..      58     112 ..      21     117 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.5e-05
  PF01183.15  64 seakaeadyflsnvqkldaktlvlvlDvEsnktsrkskaantaeilafldeikkkaGykp 123
                   a++  + fl++++      + +  D+E++++++++k+  ++++l+ +d++++++G+k 
  MMETSP1325-20131115|2582_1  58 VPATKREELFLKKLE-----LCTVTFDFEDQTSEEAKKNIKRTTLLELVDYVNNSTGQKL 112
                 568888899999994.....444467***99999999999999**************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       520  (0.0380339); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.69
# Mc/sec: 434.12
//
Query:       MMETSP1325-20131115|2584_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       100  (0.00731422); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 248.19
//
Query:       MMETSP1325-20131115|2586_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-25   87.1   7.8    5.1e-14   51.8   1.1    2.3  2  PF13857.1  Ankyrin repeats (many copies)
    2.3e-24   83.7   7.7      1e-10   40.7   0.0    3.9  4  PF00023.25 Ankyrin repeat
    2.9e-23   81.8   3.3    5.6e-11   42.5   1.1    2.1  2  PF12796.2  Ankyrin repeats (3 copies)
    3.2e-23   81.5   0.9    3.8e-16   59.0   0.1    2.8  3  PF13637.1  Ankyrin repeats (many copies)
    1.3e-16   58.8   1.5      1e-07   31.3   0.2    2.9  3  PF13606.1  Ankyrin repeat
     0.0019   17.2   0.0     0.0021   17.1   0.0    1.1  1  PF05475.6  Chlamydia virulence protein PGP3-D


Domain annotation for each model (and alignments):
>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.3   3.4e-15   7.7e-12       1      53 [.       3      54 ..       3      54 .. 0.87
   2 !   51.8   1.1   2.2e-17   5.1e-14       1      56 []      36      90 ..      36      90 .. 0.98

  Alignments for each domain:
  == domain 1    score: 44.9 bits;  conditional E-value: 3.4e-15
   PF13857.1  1 Llehg.padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53
                Ll +g +++v  +d++  t+Lh+Aa++g++++v+ Lla+ga+l ++d++g tal
  MMETSP1325-20131115|2586_1  3 LLGAGgDPNVLNQDGW--TALHFAANKGHPDCVEVLLAKGANLEATDENGKTAL 54
                7888855555555555..**********************************98 PP

  == domain 2    score: 51.8 bits;  conditional E-value: 2.2e-17
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                Ll++g a++ atde+g t+Lh Aa++g++++++ L+ +gadl ++d +g tal lA
  MMETSP1325-20131115|2586_1 36 LLAKG-ANLEATDENGKTALHHAAMNGHPDCMQALITHGADLMATDMEGKTALNLA 90
                89999.***********************************************998 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.025        56      20      32 ..       2      14 ..       1      15 [. 0.88
   2 !   40.7   0.0   4.4e-14     1e-10       1      32 [.      16      47 ..      16      48 .. 0.97
   3 !   39.6   1.0   9.6e-14   2.2e-10       1      32 [.      49      80 ..      49      81 .. 0.97
   4 ?    1.0   0.0      0.17   3.8e+02       2      17 ..      83      98 ..      82     100 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.025
                HHHHTTSSTTHBH CS
  PF00023.25 20 lLlsqGAdlnaqd 32
                 Ll++G d+n+ +
  MMETSP1325-20131115|2586_1  2 ALLGAGGDPNVLN 14
                59********976 PP

  == domain 2    score: 40.7 bits;  conditional E-value: 4.4e-14
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                dG+T+LH Aa +g++++v+ Ll +GA+l a+d
  MMETSP1325-20131115|2586_1 16 DGWTALHFAANKGHPDCVEVLLAKGANLEATD 47
                8****************************998 PP

  == domain 3    score: 39.6 bits;  conditional E-value: 9.6e-14
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                +G T+LH Aa++g++++++ L+ +GAdl a+d
  MMETSP1325-20131115|2586_1 49 NGKTALHHAAMNGHPDCMQALITHGADLMATD 80
                79***************************998 PP

  == domain 4    score: 1.0 bits;  conditional E-value: 0.17
                SCBHHHHHHHTTHHHH CS
  PF00023.25  2 GfTPLHlAalrgnlev 17
                G T+L lA + ++++v
  MMETSP1325-20131115|2586_1 83 GKTALNLAKQGDCTSV 98
                99***99987777766 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.0   1.1e-13   2.6e-10      44      89 .]       2      47 ..       1      47 [. 0.95
   2 !   42.5   1.1   2.5e-14   5.6e-11      25      67 ..      49      98 ..      43     112 .. 0.80

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 1.1e-13
   PF12796.2 44 lLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89
                +Ll ag d+n  +++g+t+Lh+A+ +gh ++v++Ll kga+++++d
  MMETSP1325-20131115|2586_1  2 ALLGAGGDPNVLNQDGWTALHFAANKGHPDCVEVLLAKGANLEATD 47
                6999*************************************98875 PP

  == domain 2    score: 42.5 bits;  conditional E-value: 2.5e-14
   PF12796.2 25 lgetpLhlAaeagnleivklLleagadvnakdkegntpLhlA.......v 67
                 g+t+Lh+Aa +g+ +++++L+ +gad+ a+d+eg+t+L lA       v
  MMETSP1325-20131115|2586_1 49 NGKTALHHAAMNGHPDCMQALITHGADLMATDMEGKTALNLAkqgdctsV 98
                3899*************************************944444334 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   1.5e-09   3.4e-06      21      54 .]       4      37 ..       2      37 .. 0.90
   2 !   59.0   0.1   1.7e-19   3.8e-16       1      54 []      17      70 ..      17      70 .. 0.98
   3 ?    3.8   0.0     0.034        77      18      41 ..      67      90 ..      66      93 .. 0.91

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 1.5e-09
   PF13637.1 21 lekgidinrtdesGntaLhiAalrgnieilklLl 54
                l  g d+n ++ +G+taLh+Aa +g++++++ Ll
  MMETSP1325-20131115|2586_1  4 LGAGGDPNVLNQDGWTALHFAANKGHPDCVEVLL 37
                5566699************************997 PP

  == domain 2    score: 59.0 bits;  conditional E-value: 1.7e-19
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                g+taLh aa++g+ ++v+ Ll+kg+++ +tde+G taLh Aa++g++++ + L+
  MMETSP1325-20131115|2586_1 17 GWTALHFAANKGHPDCVEVLLAKGANLEATDENGKTALHHAAMNGHPDCMQALI 70
                69**************************************************98 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.034
   PF13637.1 18 klLlekgidinrtdesGntaLhiA 41
                + L+ +g+d+ +td +G taL +A
  MMETSP1325-20131115|2586_1 67 QALITHGADLMATDMEGKTALNLA 90
                67999****************987 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   2.9e-09   6.5e-06       1      29 [.      16      44 ..      16      45 .. 0.95
   2 !   31.3   0.2   4.5e-11     1e-07       1      28 [.      49      76 ..      49      78 .. 0.96
   3 ?   -2.4   0.0       3.5     8e+03       2       9 ..      83      90 ..      82      90 .. 0.81

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 2.9e-09
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +G+T+Lh Aa +g+++ ve Ll +ga++ 
  MMETSP1325-20131115|2586_1 16 DGWTALHFAANKGHPDCVEVLLAKGANLE 44
                79************************985 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 4.5e-11
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadi 28
                nG T+Lh+Aa ng+++ ++aL+ +gad+
  MMETSP1325-20131115|2586_1 49 NGKTALHHAAMNGHPDCMQALITHGADL 76
                799************************7 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 3.5
   PF13606.1  2 GnTpLhlA 9 
                G T+L lA
  MMETSP1325-20131115|2586_1 83 GKTALNLA 90
                78999987 PP

>> PF05475.6  Chlamydia virulence protein PGP3-D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   9.2e-07    0.0021     154     191 ..      61      98 ..      34     109 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 9.2e-07
   PF05475.6 154 vtpdnadsmflisadiiasrmeGtvvlalvkeGdskpc 191
                   pd  ++++   ad++a+ meG+ +l l k+Gd + +
  MMETSP1325-20131115|2586_1  61 GHPDCMQALITHGADLMATDMEGKTALNLAKQGDCTSV 98 
                 4689999999999*********************8654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 447.84
//
Query:       MMETSP1325-20131115|2587_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-10   38.0   0.0    5.8e-10   37.9   0.0    1.1  1  PF00996.13 GDP dissociation inhibitor
    0.00031   19.8   0.1    0.00035   19.6   0.0    1.0  1  PF12831.2  FAD dependent oxidoreductase
     0.0072   16.2   0.0       0.01   15.7   0.0    1.2  1  PF11214.3  Mediator complex subunit 2


Domain annotation for each model (and alignments):
>> PF00996.13  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.0   1.3e-13   5.8e-10       4      67 ..       2      65 ..       1      83 [. 0.83

  Alignments for each domain:
  == domain 1    score: 37.9 bits;  conditional E-value: 1.3e-13
                --SEEEE----HHHHH---TTT----EEEE-SSS----.---EE-HHHHHHHH-SSHHHHHHH-- CS
  PF00996.13  4 eyDvivlGtGlkecilsgllsvsgkkvLhlDrneyYGg.esaslsleeLyerfkqeeekrdeklg 67
                 +D +vlGt l  +++++  + sgk+vLhlD n++YGg + a ++le+ +e  +q+  + + kl+
  MMETSP1325-20131115|2587_1  2 SFDAVVLGTALSPSLVAAGAAFSGKRVLHLDANDFYGGlDDAGFTLEQTIEWAEQR-LQVQRKLA 65
                59**********************************9956899*****98877666.33334444 PP

>> PF12831.2  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   7.6e-08   0.00035       1     104 [.       4     103 ..       4     111 .. 0.78

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 7.6e-08
   PF12831.2   1 DvvVvGGgpaGvaAAiaAarlGakvlLverrgvlGGmltsglvatddgnkdee..qvigglareflerlrergaakqeerkkwvseltfepevakevleemlaeag 104
                 D vV G  ++    A  Aa +G++vl ++ +++ GG+  +g     +  ++e+  qv+++la+e +++++e+g++ q+++++     + +  ++++v++ + ++ +
  MMETSP1325-20131115|2587_1   4 DAVVLGTALSPSLVAAGAAFSGKRVLHLDANDFYGGLDDAGFTLEQTIEWAEQrlQVQRKLAEEATSENKEDGKE-QHDEDGE----VADKALLEKVIHSLARR-Q 103
                 668999999999999**********************998887555545555568**************886665.4433332....57888888888888755.4 PP

>> PF11214.3  Mediator complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.2e-06      0.01      38     102 ..      17      81 ..       7      87 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.2e-06
   PF11214.3  38 litgfnnqlqksLkekikkFhsiLDdlevklndaksyvdtlvelkkkqeekklkeEeEkkkkeee 102
                 +++g   + ++ L+   + F++ LDd  ++l+++ ++ ++ ++ ++k  e+   e +E  k +++
  MMETSP1325-20131115|2587_1  17 VAAGAAFSGKRVLHLDANDFYGGLDDAGFTLEQTIEWAEQRLQVQRKLAEEATSENKEDGKEQHD 81 
                 55566666688999999************************999999877766666665554333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       817  (0.0597572); expected 273.4 (0.02)
Passed bias filter:                      522  (0.0381802); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|2585_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   22.1   0.0    0.00019   21.4   0.0    1.3  1  PF00373.13 FERM central domain
  ------ inclusion threshold ------
      0.023   14.5   0.0      0.044   13.6   0.0    1.5  1  PF00784.12 MyTH4 domain


Domain annotation for each model (and alignments):
>> PF00373.13  FERM central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   2.8e-08   0.00019       6     126 .]     170     289 ..     165     289 .. 0.74

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 2.8e-08
                 xxxxxxx.xxxxxxxxxxxx.xxx.xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00373.13   6 ydevrin.llYeQakwdlle.erl.dcteeeallLAALqlqiekg.dseeqeaasssdlekeeeeaeseqllpvsprllkkeks.kqleqrileahknvrgl..slaeaklkylqaaqslpdyGvslF 126
                 +d+v +n l Y+Qa +++++ ++l  ++e +a+ LA L + + +  d+++  +   +d + +      ++++p     ++++ks +++ + + +a  +v g    +a  ++ +l+ +++   yG+++F
  MMETSP1325-20131115|2585_1 170 SDDVMFNrLIYLQAEDEVINlGNLpIADEATAVDLATLSYAVAYEaDFPDDPTMLATDPDYL-----VKDFIP---LGWRERKSvEEYAAMVVAARDKVCGAdfEPAAMQQTFLEKVWNHDLYGAHFF 289
                 5566665277*********989994467789*****************95555444333333.....356899...55555555155777888888899996448888888****************9 PP

>> PF00784.12  MyTH4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   6.4e-06     0.044      64     114 ..       3      50 ..       1      51 [. 0.88

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 6.4e-06
  PF00784.12  64 ylseflkkraheqssepeleglaakclerLkktkkegkRklpPsaeeieal 114
                 yl +f+  +++   ++ +++++a++cl+ L+ + + g+  ++Ps+eei+a 
  MMETSP1325-20131115|2585_1   3 YLLNFMLVQKE---KKGAVKNYARYCLRTLEGMLSSGASGFVPSVEEIQAY 50 
                 78888888855...45699******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.36s 00:00:01.03 Elapsed: 00:00:00.65
# Mc/sec: 1419.38
//
Query:       MMETSP1325-20131115|2590_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        51  (0.00373025); expected 273.4 (0.02)
Passed bias filter:                       48  (0.00351083); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.32s 00:00:00.61 Elapsed: 00:00:00.51
# Mc/sec: 145.66
//
Query:       MMETSP1325-20131115|2591_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0057   14.8   0.0     0.0081   14.3   0.0    1.1  1  PF01130.16 CD36 family
  ------ inclusion threshold ------
      0.024   13.7   0.0      0.031   13.3   0.0    1.1  1  PF12768.2  Cortical protein marker for cell polarity


Domain annotation for each model (and alignments):
>> PF01130.16  CD36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.2e-06    0.0081     411     462 ..      26      77 ..      19      81 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-06
  PF01130.16 411 vilPllwveesaklddelisqlkkqlvilprivailaivllalglillllai 462
                 v++P +w +es +++ +++s+l++ + ++++ ++  a vll+++++++++++
  MMETSP1325-20131115|2591_1  26 VFIPYVWSDESYEMTSSTASDLHSDISTPKEQAKLGANVLLGFACVFAVVCL 77 
                 89*********************************************99986 PP

>> PF12768.2  Cortical protein marker for cell polarity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.5e-06     0.031     188     260 ..      27      94 ..      23     111 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.5e-06
   PF12768.2 188 wiPylltss.ssgesgsissifleksnsfssskdlkklsrgiVVlIsLaiAlgtvfLlgllgiilalirrkrqk 260
                 +iPy+ + +  + +s++ s + ++     s++k  ++ + g+ Vl ++a+  ++v L gll  + +++ r +q 
  MMETSP1325-20131115|2591_1  27 FIPYVWSDEsYEMTSSTASDLHSD----ISTPK--EQAKLGANVLLGFACVFAVVCLAGLLARVSERFGRAQQP 94 
                 799999987355555555555555....44444..67899*******************999999888887554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|2589_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-19   67.2   0.0    1.3e-18   66.7   0.0    1.2  1  PF02911.13 Formyl transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02911.13  Formyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.0   9.8e-23   1.3e-18       1      99 [.      68     178 ..      68     179 .. 0.91

  Alignments for each domain:
  == domain 1    score: 66.7 bits;  conditional E-value: 9.8e-23
  PF02911.13   1 kltkedgrIdw.nqsaeeihrliralspwpgayttl.....ngkrvkilkaevveesstaas....pGtivsvdkn.gllvacg.dgallilelqpegkkamsaedflngs 99 
                 k+t e+g +++ ++sa ++h+++ra++ wpg+ +++     + +r+k++ + vvee s+  +    p t v v+k+ +++v c+ ++ l+i++lqp  kka +a++f+ng 
  MMETSP1325-20131115|2589_1  68 KITVEEGQVCFaTESASTVHNKVRAFAGWPGVSSEFvvgegDPQRIKLITTCVVEEGSADRAteppPSTDVIVEKGgAMFVECAgGSKLEIKQLQPRAKKATDAKSFVNGL 178
                 7999******************************8888876668**********888877778999999888888889******7778*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1110.62
//
Query:       MMETSP1325-20131115|2593_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.66
# Mc/sec: 740.69
//
Query:       MMETSP1325-20131115|2595_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-07   30.5   0.1    2.4e-07   30.3   0.1    1.1  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.1   1.8e-11   2.4e-07       4      68 ..       3      74 ..       1      76 [] 0.85

  Alignments for each domain:
  == domain 1    score: 30.3 bits;  conditional E-value: 1.8e-11
                E----EEE-TT-B--EEEEEEE-EEEEEEE-----EE....EEEEE-TTEECSGGGCCSSS...B-SSEEEE CS
  PF00027.24  4 fkkgevifkeGdpadslyiilsGkvkvykndedgkes....ilaelgpGdffGelalltge...prsatvva 68
                ++ g  i+ +G++ + +++i+sG + ++++  d+  +    +l++l+ Gd++G  all+      ++++vva
  MMETSP1325-20131115|2595_1  3 VQMGKHIVTQGETVNACFFIMSGVAHMFRTVVDEGGTshrvLLGKLSTGDCCGVEALLHVGetvVSNVSVVA 74
                67899**********************99987777777899*****************98855555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|2597_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-11   41.9   0.0    2.9e-11   41.8   0.0    1.0  1  PF00012.15 Hsp70 protein


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   2.1e-15   2.9e-11     101     149 ..      12      59 ..       2      60 .] 0.84

  Alignments for each domain:
  == domain 1    score: 41.8 bits;  conditional E-value: 2.1e-15
                 EEXX..EEEEXHHHHHHHHHHHHHHHHHHHHSS.XXEEEEEEXTTXXHH CS
  PF00012.15 101 vealgekkkftpeeisamvLkklketaeaylgekvtdavitvPaYFnda 149
                 ++    k+ + +eei a +L klk++ae+ylg +v++av++vP+ F+da
  MMETSP1325-20131115|2597_1  12 MTES-LKHPYRAEEICALILAKLKADAEDYLGVEVRHAVVSVPPCFTDA 59 
                 3322.3589***************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 252.25
//
Query:       MMETSP1325-20131115|2588_1  [L=587]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   14.5   0.0      0.021   13.8   0.0    1.2  1  PF06340.6 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F


Domain annotation for each model (and alignments):
>> PF06340.6  Vibrio cholerae toxin co-regulated pilus biosynthesis protein F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.6e-06     0.021     136     188 ..     151     205 ..     142     211 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.6e-06
                 XXEEEEXX..XXEEEEEXXXXXTTSXXBXXXXEEXXXXXXXXSXSSXEEX-B--- CS
   PF06340.6 136 Grfltked..geykivkvGnvadsspvkLPaivskrgLvGtalvvnalpaeivpn 188
                  rfl k++  g y   +vG  a++sp++L +++s   L  +al+   +p++ + n
  MMETSP1325-20131115|2588_1 151 DRFLLKNNrsGAYAWDEVGTDAETSPLQLADVMSYDELSVSALMAMSTPTHFINN 205
                 59*****98899********************************99999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.91u 0.35s 00:00:01.26 Elapsed: 00:00:00.63
# Mc/sec: 2232.80
//
Query:       MMETSP1325-20131115|2596_1  [L=435]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-61  206.8   0.1    4.8e-61  206.5   0.0    1.0  1  PF00067.17 Cytochrome P450
  ------ inclusion threshold ------
      0.066   12.7   0.1      0.094   12.2   0.0    1.1  1  PF08878.6  Domain of unknown function (DUF1837)


Domain annotation for each model (and alignments):
>> PF00067.17  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.5   0.0     7e-65   4.8e-61     137     439 ..       4     295 ..       1     312 [. 0.90

  Alignments for each domain:
  == domain 1    score: 206.5 bits;  conditional E-value: 7e-65
                 ..B-CHHHHHHHHHHHHHHHHHS----.TSSSHHHHHHHHHHHHHHHHHCHGGGTTSHCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSS-SHHHHHHHCTTTSSSSSSS-HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCCCTS--HHHHTTS-HHHHHHHHHHHHHS-SSSTEEEEE-SS-EECTT..EEE-TT-EEEEETTTHHT-TTTSSSTTS--GGGGC-STT-C.SCCTT--TT-----S----HHHHHHHHHHHHHHHHHEEEEETC CS
  PF00067.17 137 selditellskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllllfpllkylptkllrklkeavkklkdlldklieerretldsakksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevlgdkreptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirg..ylipkGtevivnlyalhrdpevfpnPeeFdpeRFldekgnskrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqp 439
                 +e+d+++++  ++l + g + +++    ++ +++ ++ k++++ +s+ s+   + + l   ++ ++ ++++   +++kkl+ + d+li  r +  +  ++++ d l a+l+++          +++++ ++ ++l+aG+dTt+   +++ +++akn++vq+k++eE+ +vlg+++++t +d+ kl+y ++v +EtLRl++++p  + R +tkdv++r+   +ipk+t+v+v+l+ ++rd+e +++P+eF+peRF++  g + + +  +lPFG G R CiG +lA  e   ++a+l+q++++ + +
  MMETSP1325-20131115|2596_1   4 KEIDVQDYFHLITLRIFGALSVSHD---YGAPENVQFAKWMNHAVSWGSHVIGEHIILGLPMWNVIPQIRKLRFDIMKKLNVHFDELIDARIAARQAGEETPDDALEAMLNDQ--------QERNHMRYQLCTMLAAGHDTTAFFGCYMSFLIAKNQHVQDKIKEEVSRVLGERDQITNEDIDKLKYCRMVMQETLRLYTIIP-FVNRTTTKDVQLRDskTVIPKNTVVLVPLCLMNRDKETWDDPNEFRPERFENIAG-HTSAKNGYLPFGYGSRTCIGNHLALIEGTCMIALLMQKYRFFPVD 295
                 359*****************99997...668888899******999887666655555444555667888888889999999999999999999999999************7........25789*****************************************************************************.9******************************************************.67***************************************9654 PP

>> PF08878.6  Domain of unknown function (DUF1837)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.4e-05     0.094     142     221 ..      92     178 ..      72     184 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.4e-05
   PF08878.6 142 idde...deeekealkklldpssslddknvrinfvifigydsditkklke.....esdeykdeikkeikkkvkkilkklskeklkkik 221
                 i      +e+  +al+  l+++++++ ++++++ ++ +g+d++++  ++      ++++++d+ik+e+++   + ++ +++e ++k+k
  MMETSP1325-20131115|2596_1  92 IAARqagEETPDDALEAMLNDQQERNHMRYQLCTMLAAGHDTTAFFGCYMsfliaKNQHVQDKIKEEVSRVLGERDQ-ITNEDIDKLK 178
                 333356677999********99999****************9998666669*******************9999999.8888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.37s 00:00:01.12 Elapsed: 00:00:00.60
# Mc/sec: 1737.36
//
Query:       MMETSP1325-20131115|2600_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   27.1   0.0    1.5e-06   26.8   0.0    1.1  1  PF00909.16 Ammonium Transporter Family


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   1.1e-10   1.5e-06     337     399 .]       9      72 ..       2      72 .. 0.89

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 1.1e-10
                 ------...-HHHHHHHHHHHHHHH---TTT---HHHHHH---B-XHHHHHXXXHHHHXXXXSB CS
  PF00909.16 337 ggllsgeg.kqlvvqligilvilayafvvtlilllllklllgLrvseeeeevglDvaehgetay 399
                 +gll+ +g + +v+q+ g l i ++++v ++ ++ +l      rv++  ee+g+D+ ehg  ay
  MMETSP1325-20131115|2600_1   9 AGLLYDGGwNMMVAQATGLLSICGWVMVNMIPFFAMLRGCGIFRVDAFVEEMGMDIWEHGGGAY 72 
                 455555555***************************************************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|2602_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-06   27.8   0.0    1.6e-06   27.3   0.0    1.2  1  PF12237.3 Phosphorylated CTD interacting factor 1 WW domain


Domain annotation for each model (and alignments):
>> PF12237.3  Phosphorylated CTD interacting factor 1 WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   1.2e-10   1.6e-06     118     175 ..       3      58 ..       1      59 [. 0.93

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 1.2e-10
   PF12237.3 118 aaaehleelLeaekskealsfvvivpewkekkvlekleeskflrkevvlsakeheyvd 175
                 a+++h+e lL ++ s+e+lsf v++p w++++ l  l+++ +lr ev +++++h+++d
  MMETSP1325-20131115|2602_1   3 ATVTHIEGLL-EA-SSEPLSFAVVIPVWEQSESLGLLQACPYLRGEVRVPKEDHAWRD 58 
                 7899******.44.8***************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 571.05
//
Query:       MMETSP1325-20131115|2603_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 382.58
//
Query:       MMETSP1325-20131115|2598_1  [L=468]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-07   31.1  19.4    1.1e-06   28.0   7.6    2.9  2  PF05978.11 Ion channel regulatory protein UNC-93
      2e-05   23.3  32.2    0.00021   20.0  21.6    2.5  1  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF05978.11  Ion channel regulatory protein UNC-93
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   7.6   1.7e-10   1.1e-06      21     119 ..      43     150 ..      26     188 .. 0.75
   2 !    7.3   0.9    0.0004       2.7       2     105 ..     267     378 ..     262     388 .. 0.64

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 1.7e-10
  PF05978.11  21 svieslaerdpdkiearaGYyslaiiyavftvsclvapsvvsilt.pkwalvigallyalfqlgFlfln.......syy.lyissallGvgaallwvgqGqyLtenst 119
                 sv   +a ++  ++  + G ys+a++ya +++++++  +v+ + +  k al+ + ++yal+ +++l          +++ +++++++ G+ga +lw++qG y +en +
  MMETSP1325-20131115|2598_1  43 SVTSCIALATSSGLPGNLGSYSVAVLYACYVITAMLFSQVIIFYSsQKGALTGSLAVYALYVASYLVAAlvesdsvKWIaVLFGASIGGIGAGVLWTAQGAYYSENAR 150
                 4444455555556888899************99988777776665157888889999*********853222222245427899*********************976 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0004
  PF05978.11   2 gvgflilftafdsqefieesvieslaerdpdkie.araGYyslaiiyavftv...sclvap..svvsiltpkwalvigallyalfq.lgFlf...lnsyylyissallGvgaal 105
                 ++gf   f+    q+ +  +v  + +++  d+i+ +++   s  ++y++ +v   +++ +p  ++ ++ +  +++viga++++++  ++Fl    + + +l++   + G g ++
  MMETSP1325-20131115|2598_1 267 AFGFAAAFITAYIQGSVVSPVYGDDHTD--DEISdSQSQHDSRVLLYSSIAVgvaTAMSMPffYLKKKAGTPLVMVIGAVCFVFVAlMSFLLedgPLRHILWLVYIVYGCGRSI 378
                 4666666666666777777777666666..4554145556677777776654111344444114678889999*********98862578763334566777777777777765 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0  21.6     3e-08   0.00021      15     337 ..      44     399 ..      26     418 .. 0.60

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 3e-08
  PF07690.11  15 lgpalplalaedlgispseigwlltlyslgyaiasllaGrlsdrfGrrr.vlllglllfalg.lllllfa.....sslwalllvlrvlqGlgagalfpagaaliadwfpke.........ergralgllsagfslGa.ilgpllggllasslg....WravFlilailsllaav.lvllll...prepperkrkspaeelrkepaplvpawklllkppvlw.....illialllfffvfsg.lltllplylqevlglsp...........glllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalglallaftssavwlllvlvliGfglglvfptllalasdlappeerG.t 337
                 +++ +  ala++ g+ +   +  +++ ++ y+i+++l++ ++  ++  +  l  +l+++al  + +l+ a     s  w ++l++  + G+gag+l++a  a+ ++ +            e + ++g + a+f lG+ +l  ++g+l+  ++       a++++ +++++ +++ +    +    +e+++ +    +e+    ++++++a++ll+++          + ++++ +f+  ++  ++ +p+y  +++  ++            ll+     +++  ++ ++++ + +l ++ g    ++++ ++++++al+ +ll      ++l+lv++++G+g ++  +t  a+ +d++p   ++ +
  MMETSP1325-20131115|2598_1  44 VTSCI--ALATSSGLPGNLGSYSVAVLYACYVITAMLFSQVIIFYSSQKgALTGSLAVYALYvASYLVAAlvesdSVKWIAVLFGASIGGIGAGVLWTAQGAYYSENARLYaqakgvtkeEATGYFGSIFACFYLGFeVLLKIIGSLVGLHATgeaaKYAIYILYTAIAIGSTIgM--TSVrnmKAEETAGGDGVTIEK-IDMTKKVLSALELLFTNAKCAlmiptNFAFGFAAAFITAYIqGSVVSPVY-GDDHTDDEisdsqsqhdsrVLLY----SSIAVGVATAMSMPFFYLKKKAGTPLVMVIGAVCFVFVALMSFLLEDGPLRHILWLVYIVYGCGRSIWESTTKAVFADFFPDTPQAaF 399
                 22222..56666777777777777777777777777777777777777777777777777774444442244665445557888888****************9998776534555555588888888888888888888888888888444436643333444444444443321..222121333333333333333.33444444469999999944222344333333333333333488888888.44444444688889986433333....56666666666667777778877766666666666666666666666689999999************************87555521 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       674  (0.0492978); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.68
# Mc/sec: 1649.26
//
Query:       MMETSP1325-20131115|2604_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 565.18
//
Query:       MMETSP1325-20131115|2605_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.66
# Mc/sec: 526.47
//
Query:       MMETSP1325-20131115|2606_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-07   29.6   0.2    2.2e-07   29.6   0.1    2.0  2  PF00909.16 Ammonium Transporter Family
    0.00023   20.3   2.1    0.00036   19.6   1.4    1.4  1  PF06912.6  Protein of unknown function (DUF1275)
  ------ inclusion threshold ------
        1.3    8.5  11.9      0.064   12.8   3.9    1.8  2  PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
          2    6.3   7.8        2.4    6.0   5.4    1.1  1  PF01601.11 Coronavirus S2 glycoprotein


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.1   6.4e-11   2.2e-07     347     397 ..       4      54 ..       2      56 .. 0.95
   2 ?   -0.5   1.2     0.087     3e+02     272     292 ..      88     108 ..      81     127 .. 0.69

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 6.4e-11
                 HHHHHHHHHHHHHH---TTT---HHHHHH---B-XHHHHHXXXHHHHXXXX CS
  PF00909.16 347 lvvqligilvilayafvvtlilllllklllgLrvseeeeevglDvaehget 397
                  ++q i+i+++++ya + t+il++ +++++ +r ++eeee+glDv+ h +t
  MMETSP1325-20131115|2606_1   4 PWRQFIAIVAVTLYAGGATFILAVAISIFMRIRTTAEEEEEGLDVNLHHQT 54 
                 589********************************************9875 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.087
                 --------------------- CS
  PF00909.16 272 vepwgAliiGlvAgvlsvlgv 292
                 v++wgA++  ++A++ +vl++
  MMETSP1325-20131115|2606_1  88 VMVWGAIVAAALAAFAAVLAC 108
                 566666666666666666665 PP

>> PF06912.6  Protein of unknown function (DUF1275)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   1.4   1.1e-07   0.00036      93     196 ..       9     110 ..       7     125 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 1.1e-07
   PF06912.6  93 lliaallgaalpnteavlvtiallafamGlqnaafrklsgaeirttvmTgnltdlgidlgrllrgn.rrnrrrlllrlllvlsfllGavvGallfkllgfaalll 196
                 ++i+a+  +a++    ++++ ++++++m + ++a ++ +g +++  + T ++ + g++l+++  g   +  ++ +l+++ +l+++ Ga+v+a l  +    a + 
  MMETSP1325-20131115|2606_1   9 IAIVAVTLYAGGA---TFILAVAISIFMRIRTTAEEEEEGLDVNLHHQTLMYDKYGENLHEAKLGSfANYWWDDWLYVWSILVMVWGAIVAAALAAFAAVLACWE 110
                 4556666666666...79******************************************98888876689999**********************999988885 PP

>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2      0.29   9.8e+02     110     120 ..      18      28 ..       5      46 .. 0.53
   2 ?   12.8   3.9   1.9e-05     0.064      41     108 ..      67     122 ..      34     134 .. 0.71

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.29
   PF13903.1 110 lagilillavv 120
                 ++g+ ++lav+
  MMETSP1325-20131115|2606_1  18 AGGATFILAVA 28 
                 22222222222 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 1.9e-05
   PF13903.1  41 shlglwricfllevdvenesatalldltrvvivflllglvlillaavlallaslkksktlllltgvll 108
                 ++lg +  +++++           + +++++ v+++ ++v+++laa++a+la++ +  t+++ + +  
  MMETSP1325-20131115|2606_1  67 AKLGSFANYWWDD-----------WLYVWSILVMVWGAIVAAALAAFAAVLACWERCTTAVT-SCCTS 122
                 4456666677777...........8899999999********************77654332.22333 PP

>> PF01601.11  Coronavirus S2 glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   5.4   0.00069       2.4     537     591 ..      69     126 ..      57     145 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00069
  PF01601.11 537 lnrvetyiKWpW.yvWLaiilalvalvllllfillstgccG..clsClgskckkccse 591
                 l+ + +y    W yvW +++++  a+v + l  + +   c   c++ ++s+c++ccs 
  MMETSP1325-20131115|2606_1  69 LGSFANYWWDDWlYVWSILVMVWGAIVAAALAAFAAVLACWerCTTAVTSCCTSCCSF 126
                 6667777655677999777776655555544444444333325788888999999983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       867  (0.0634143); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 822.28
//
Query:       MMETSP1325-20131115|2608_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-13   51.9   0.2    1.4e-13   51.4   0.1    1.2  1  PF00975.15 Thioesterase domain
    1.8e-05   24.4   2.3    3.6e-05   23.4   1.6    1.5  1  PF12695.2  Alpha/beta hydrolase family
    0.00011   22.2   0.1    0.00022   21.3   0.0    1.5  1  PF00550.20 Phosphopantetheine attachment site
    0.00012   21.9   3.2    0.00025   20.8   2.2    1.5  1  PF12697.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF00975.15  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.1   4.2e-17   1.4e-13       1      95 [.     136     232 ..     136     233 .] 0.96

  Alignments for each domain:
  == domain 1    score: 51.4 bits;  conditional E-value: 4.2e-17
                 EEEEES------HHCCHHHHHHHSSS.EEEEEECCSTTC----TTTTHHHHHHHHHHHHHHHH--S-.SEEEE------HHHHHHHHHHHHHS--CE CS
  PF00975.15   1 rpLfcfppagGsasvyrklarklpdp.lveflaiqlpgrerdepllesieelaeeyaealrqiqpeg.PyaLfGySlGGllAfevArqLerqgeeva 95 
                 +pLf+++ ag sa + +  ar++ ++   ++++i ++    + p  +sie+ a  +++++++   +    aL+G+S+GG++Afe Ar +e++g+ v+
  MMETSP1325-20131115|2608_1 136 PPLFLVHGAGTSALAWTDTARHIGSRtGGKVYGISDASLTAGAPAFASIEAYATGLVDEIEKVVGKRgSAALGGWSFGGVVAFEAARVMEARGMHVS 232
                 59************************************************************998766*************************9886 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   1.6   1.1e-08   3.6e-05       2      77 ..     138     222 ..     137     231 .. 0.75

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 1.1e-08
   PF12695.2   2 vvlvhGaggdssayeplaealakr.gfavvavdl.pghgas....egaaaakrvlaadll....dleriilvGhSlGGgvalelag 77 
                 + lvhGag ++ a++++a+++ +r g  v+ +   + +  +    + +a a+ ++ ++ +    + +  +l+G+S+GG va+e+a+
  MMETSP1325-20131115|2608_1 138 LFLVHGAGTSALAWTDTARHIGSRtGGKVYGISDaSLTAGApafaSIEAYATGLV-DEIEkvvgKRGSAALGGWSFGGVVAFEAAR 222
                 5799*****************9999*****9953144433333334444555555.555566777789***************997 PP

>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   6.5e-08   0.00022      19      67 .]      60     109 ..      44     109 .. 0.83

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 6.5e-08
  PF00550.20  19 dldtdlfelGlDSllaveliarleeefg.veipvedlfelptlaelaayl 67 
                 ++ t++f+ G DS+ a++l+ +le ++g v+++v +lf+    +++a+ +
  MMETSP1325-20131115|2608_1  60 SVCTSIFDAGADSVFALRLMMKLESAYGgVRLNVGKLFTAGDARSIAEQI 109
                 455789*********************66************999999865 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   2.2   7.5e-08   0.00025       1      85 [.     138     222 ..     138     231 .. 0.81

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 7.5e-08
                 EEE------------HHHHHH.TT.TSEEEEE-----------S...S--HHHHHHHHHHHHHH--...--EEEE--------HHHHHH CS
   PF12697.2   1 vvllHGlggsaeswrplaeaL.aa.gyrvvapDlpGhGrSdrppdydpdtledlaadlaalldalgl..rpvvlvGHSlGgavalaaaa 85 
                 ++l+HG+g+sa  w+  a+++ ++ g  v+ ++  +   ++++p   + ++e +a  l++ ++++ +  + + l G+S+Gg+va +aa+
  MMETSP1325-20131115|2608_1 138 LFLVHGAGTSALAWTDTARHIgSRtGGKVYGISDASL--TAGAP--AFASIEAYATGLVDEIEKVVGkrGSAALGGWSFGGVVAFEAAR 222
                 689******************6645****99976654..44444..3678888888777777776665669*************99995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1187.98
//
Query:       MMETSP1325-20131115|2611_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00016   20.0   0.2    0.00016   20.0   0.1    1.0  1  PF00171.17 Aldehyde dehydrogenase family
  ------ inclusion threshold ------
      0.076   12.4   0.1      0.097   12.0   0.1    1.2  1  PF02002.12 TFIIE alpha subunit


Domain annotation for each model (and alignments):
>> PF00171.17  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   2.4e-08   0.00016      26      93 ..       7      75 ..       1      82 [. 0.88

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.4e-08
                --HHHHHHHHHHHHHHHHHHCTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHH----HHHHHH.HHHHH CS
  PF00171.17 26 ataedvdaavaaAkaafkawaklpaeeRaeilrkaadlleerrdelaelevletGkplaeara.evaea 93
                 +  +v ++v+  ++ f+a ++ + e R + l++a++++ er+d+la+++ ++ Gk+  ea + e++ +
  MMETSP1325-20131115|2611_1  7 DDVVHVPSVVEPMRKYFEAGNTRSYEWRVQQLKQARKMIMERKDQLAAALEADLGKTEDEAMItEITVV 75
                55667888899999999999999**************************************99998765 PP

>> PF02002.12  TFIIE alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.4e-05     0.097      50     103 ..       3      63 ..       1      66 [. 0.86

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.4e-05
                 XXXXXXXXXXXXXXX......XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX-----SSS- CS
  PF02002.12  50 kLydakLvkyrrrkd......detgwykyyyriny.ekllevvkkkleevvkkLekkleke 103
                 +L+d+ +v +  +++      +  ++++y +r+++ +++ +++ +++++++  Le +l k 
  MMETSP1325-20131115|2611_1   3 HLKDDDVVHVPSVVEpmrkyfEAGNTRSYEWRVQQlKQARKMIMERKDQLAAALEADLGKT 63 
                 6888889988888888888889999*******9753899****************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       667  (0.0487858); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 447.32
//
Query:       MMETSP1325-20131115|2610_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-44  151.5  12.4    2.8e-44  151.1   8.6    1.0  1  PF01151.13 GNS1/SUR4 family


Domain annotation for each model (and alignments):
>> PF01151.13  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.1   8.6   2.1e-48   2.8e-44       6     250 .]      19     252 ..      15     252 .. 0.90

  Alignments for each domain:
  == domain 1    score: 151.1 bits;  conditional E-value: 2.1e-48
  PF01151.13   6 pkvplliallYlllvllgnklmknrkpf.klkalvivhNlflavlSlvtfvgmvksllevltkaglvdllckddssdegrlrngllaflvllfylsKfvEllDTvflvlkkk..qvsfLhvYHHatvmllmwaglrya.tsspiwffvllNsfvHaimYtYYflaalgakklvvpwkrliTtlQilQfvvgllaavyllvsytlkkvgcdtsqapkaaialnllyllslllLFlnffvksylkkkkkkk 250
                 p + + i ++Yl+  l g  +m+  k +    ++ +v+N+f++ lS+++++  ++ +++ ++  + + +     + d +  + ++l + +++  lsKfv+++DT+++vl+k   q+s+LhvYHH+t+ +++ + ++++ +++ i+f +++N+++H+imY+YY+++ l++  +++ +k ++T++Q++Qf+ ++++av +++       + ++s    +++ l++ y  ++++LF +f++++y +k+k+kk
  MMETSP1325-20131115|2610_1  19 PALNFGIPAAYLACTLGGYAIMRPLKGLtIPDWFKLVYNVFQVSLSMYCVILGMPVVTDFIA--KPFGIGL---PIDGSGPEGKYLHYCICIHFLSKFVDYVDTLLIVLRKAdkQLSVLHVYHHCTISMVWGYLINIQmANGTICFGAWINAVIHSIMYSYYAFTVLKLG-IAKLIKVWVTRVQLIQFCSCICHAVSVMIL------EKQIS---FELASLQFGYHCTMIALFGQFYISNYSRKSKEKK 252
                 6667888999*************887663778999*******************88888885..6677777...78999999999999999999****************9777*****************9999887578999*********************99985.77899************************9......44345...67***************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       638  (0.0466647); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1132.82
//
Query:       MMETSP1325-20131115|2615_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-22   79.1   0.0    1.8e-22   79.0   0.0    1.0  1  PF00232.13 Glycosyl hydrolase family 1


Domain annotation for each model (and alignments):
>> PF00232.13  Glycosyl hydrolase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.0   0.0   1.3e-26   1.8e-22     161     254 ..       1     103 [.       1     104 [] 0.98

  Alignments for each domain:
  == domain 1    score: 79.0 bits;  conditional E-value: 1.3e-26
                 EEEEB-HHHHHHHHHT-------.......--THHHHHHHHHHHHHHHHHHHHHHHHHT..TT-B---B-BE-EEEESSS-HHHH.HHHHHHHHHHTHHHHHH CS
  PF00232.13 161 wlTfneplvvallgyltgehapg.......kkdleaayeaaHnlllaharavklyreka..qkgkiglvlnlslaeplseseedvveaaeraleflngwfldp 254
                 w+Tfnepl++++lgy tg+hapg        ++++++y++aHn+l +ha+++++y+e+    +gk+g +ln+ + epl+ s++  v+aaer ++f   wf+dp
  MMETSP1325-20131115|2615_1   1 WITFNEPLTFVNLGYSTGTHAPGrctdcdrGDSSTEPYTVAHNVLNTHAATYRAYKETEqgANGKMGTTLNSVWGEPLDASDPTSVAAAERFVDFELAWFADP 103
                 *****************************999************************9987789***************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 498.44
//
Query:       MMETSP1325-20131115|2616_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-24   85.8   0.0    3.7e-24   85.7   0.0    1.0  1  PF00112.18 Papain family cysteine protease
    0.00013   20.5   0.0    0.00016   20.2   0.0    1.0  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.7   0.0   5.4e-28   3.7e-24     149     218 ..       1      70 [.       1      72 [. 0.94

  Alignments for each domain:
  == domain 1    score: 85.7 bits;  conditional E-value: 5.4e-28
                 TTEEE--BSSTCC-TTG--EEEEE---BSCT.TC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
  PF00112.18 149 qlYksGvyketecsstelnhavlivGygven.gkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                 q+Y+sGvy+ + c++++l+havl+vG+g++    +yW vkNSW ++wGe+G++ri+rg+  +cgi++ +++
  MMETSP1325-20131115|2616_1   1 QFYRSGVYSPKFCDPSDLDHAVLLVGFGTDAsLGDYWTVKNSWANSWGEDGFFRIERGTG-MCGINTAVTA 70 
                 79***************************99568************************88.*****99876 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   2.3e-08   0.00016     357     397 ..      16      55 ..      12      58 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 2.3e-08
  PF03051.10 357 slmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfvm 397
                 s ++Ha++l+g+   d      w v nsW +  Ge+G+f +
  MMETSP1325-20131115|2616_1  16 SDLDHAVLLVGFGT-DASLGDYWTVKNSWANSWGEDGFFRI 55 
                 789***********.5566778****************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|2617_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 528.18
//
Query:       MMETSP1325-20131115|2618_1  [L=325]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.2    7.1   8.8        4.6    6.6   1.8    2.3  2  PF12114.3 Period protein 2/3C-terminal region


Domain annotation for each model (and alignments):
>> PF12114.3  Period protein 2/3C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.3    0.0021        29      39      83 ..      78     124 ..      58     135 .. 0.65
   2 ?    6.6   1.8   0.00034       4.6       5      77 ..     158     240 ..     155     257 .. 0.64

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.0021
   PF12114.3  39 lgsgSnkgsssgsssgssnsskyfgssdysseksekakksqdee..e 83 
                  +sg + gs  g++ +s+++s +++ ++  s   ++++++++ +  +
  MMETSP1325-20131115|2618_1  78 YRSGPHFGSRLGGQPSSNATSRAVSRIERGSRRRQQQQHQHSSRaeQ 124
                 45666666666778888888888888887777776666666655331 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.00034
   PF12114.3   5 lssssdlldlllqedsqsgtgsaasgsgsskssslgsgSnkgsssg..........sssgssnsskyfgssdysseksekakk 77 
                  s+s  + +lll ++++s+++s+a   g+ ++ss++s+  +++ sg            s s +    + + ++s e + +a++
  MMETSP1325-20131115|2618_1 158 ASTSVAISKLLLANEAHSAAASTAVKRGGGARSSTDSANGSTDGSGrmdvgngtdaPPSVSHDGALVLRDPQMSAEYDDRAHM 240
                 688889999*************9998888888774444444444443354445552223333333445555556565555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       758  (0.0554418); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:01.12
# Mc/sec: 689.22
//
Query:       MMETSP1325-20131115|2614_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.3   0.9       0.25   10.9   0.1    2.1  2  PF07332.6 Protein of unknown function (DUF1469)
      0.059   13.1   0.2       0.15   11.7   0.0    1.7  2  PF11980.3 Domain of unknown function (DUF3481)
        3.2    7.2   7.5       0.12   11.7   0.7    1.9  2  PF08114.6 ATPase proteolipid family


Domain annotation for each model (and alignments):
>> PF07332.6  Protein of unknown function (DUF1469)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   5.4e-05      0.25      77     119 ..      14      56 ..       2      58 .. 0.69
   2 ?    2.2   0.1     0.028   1.3e+02      72      89 ..      97     114 ..      88     125 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 5.4e-05
   PF07332.6  77 ivavvllllAgilalvgkrrlkakslapertieelkedvealk 119
                 +v v+++++A++       r+ ++s +p++t+e +++  + +k
  MMETSP1325-20131115|2614_1  14 VVLVAFAAVALLQCGCQAERVTERSEVPTQTAEYFQQRFQEAK 56 
                 34455555555555555678889*************9998877 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.028
   PF07332.6  72 wlAalivavvllllAgil 89 
                  lA ++++++l+ +A+i 
  MMETSP1325-20131115|2614_1  97 LLAGILTGLLLVFIALIG 114
                 556666666666666654 PP

>> PF11980.3  Domain of unknown function (DUF3481)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.3e-05      0.15      26      62 ..      13      49 ..       7      74 .. 0.81
   2 ?   -1.3   0.0      0.38   1.7e+03      21      34 ..      99     112 ..      77     124 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.3e-05
   PF11980.3 26 lvllvavclgvvLycaryhnatkkrslsvlyknenYn 62
                 v+lva +++ +L c +    +++rs   +  +e+++
  MMETSP1325-20131115|2614_1 13 FVVLVAFAAVALLQCGCQAERVTERSEVPTQTAEYFQ 49
                59***********************965554455555 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.38
   PF11980.3  21 amsgllvllvavcl 34 
                 a+   ++llv ++l
  MMETSP1325-20131115|2614_1  99 AGILTGLLLVFIAL 112
                 44445667777764 PP

>> PF08114.6  ATPase proteolipid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.5      0.44     2e+03      15      25 ..      15      25 ..      11      27 .. 0.73
   2 ?   11.7   0.7   2.7e-05      0.12       8      27 ..     103     123 ..      97     129 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.44
   PF08114.6 15 iLvGLACiAii 25
                +Lv  A +A++
  MMETSP1325-20131115|2614_1 15 VLVAFAAVALL 25
                68999988875 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 2.7e-05
   PF08114.6   8 GGviLvFi.LvGLACiAiiat 27 
                  G +LvFi L+GL C+  i t
  MMETSP1325-20131115|2614_1 103 TGLLLVFIaLIGLNCLSSIQT 123
                 599****989******99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      471  (0.03445); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.43s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 635.96
//
Query:       MMETSP1325-20131115|2619_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 777.59
//
Query:       MMETSP1325-20131115|2621_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 244.24
//
Query:       MMETSP1325-20131115|2620_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-07   28.6   4.5    1.4e-06   27.3   3.1    1.6  1  PF05653.9  Magnesium transporter NIPA
  ------ inclusion threshold ------
      0.048   12.5   3.6      0.097   11.5   2.6    1.5  1  PF00654.15 Voltage gated chloride channel


Domain annotation for each model (and alignments):
>> PF05653.9  Magnesium transporter NIPA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   3.1     2e-10   1.4e-06     174     268 ..      41     141 ..       2     146 .. 0.80

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 2e-10
   PF05653.9 174 vyiticsllgsltvmsvkalgiaikltlsGknqlky......alawilvvvvvicvvlqinyLnkaldifntsivtPvyyvlfttlvivasailfkefleq 268
                  y +  +l g+l+v+  k l+i +++  +  + lk       + a++ +v  ++ v + +  Ln+al  +n   + P+  v f  ++++++ i f+ef+e 
  MMETSP1325-20131115|2620_1  41 TYAVFSALFGTLSVVFAKCLAILLERHTKSCECLKRecmyedFFAYVCLVAWICLVGVWLFRLNEALSKYNPLFIIPLLQVNFIFFAMISGGIYFNEFDEV 141
                 355678899***************9888877776641111115678888888999999999*************************************975 PP

>> PF00654.15  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.6   1.4e-05     0.097     130     219 ..       4      96 ..       2     148 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.4e-05
                 H---HHHHHHHHHHSTT--S.-.T---...--GGGHHHHHH----------CCCHHHHHHH.HHHHCH-CHHHHHHH.-----------TTTS CS
  PF00654.15 130 lvaslvaalvlrlllgsepa.fgevtalfalsllelilfvllGilgGllGalFvrlllkve.klfrklkklkvpkrl.epalvglltgllall 219
                 lv  +++ + +++   ++ + ++e t l++++l   i +++ ++l+G l+++F+++l  +  +  ++++ lk+  ++   ++ ++l++ ++l+
  MMETSP1325-20131115|2620_1   4 LVVIVIGGVLIQMTHLHYQKkMNEDTPLPHSHLVLPITYAVFSALFGTLSVVFAKCLAILLeRHTKSCECLKRECMYeDFFAYVCLVAWICLV 96 
                 4566777777777744443335553334579999***********************999845566665555554443444333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.68
# Mc/sec: 613.19
//
Query:       MMETSP1325-20131115|2623_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.4   1.1      0.018   14.8   0.7    1.2  1  PF14143.1 YrhC-like protein


Domain annotation for each model (and alignments):
>> PF14143.1  YrhC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.7   1.3e-06     0.018      15      58 ..      17      65 ..      16      67 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.3e-06
   PF14143.1 15 fvLLals..aFLyiGlviPneakeaakk...slllgavvvfLllaflff 58
                fvLL +s  aFL++ +v+P+ a+e +      ++++ +   L+l f++f
  MMETSP1325-20131115|2623_1 17 FVLLTISifAFLMLKAVLPDRAIENMGDwelWVAMLFDSASLTLPFICF 65
                79998884468***********998865111567777788888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       515  (0.0376682); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.67
# Mc/sec: 243.21
//
Query:       MMETSP1325-20131115|2613_1  [L=783]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-76  256.2   3.0      6e-76  255.8   2.1    1.2  1  PF00890.19 FAD binding domain
    1.9e-08   34.3   0.3      1e-06   28.7   0.0    3.2  2  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
    3.7e-07   29.2   0.4    9.1e-07   27.9   0.3    1.8  1  PF01266.19 FAD dependent oxidoreductase
    6.9e-05   22.5   0.1    0.00014   21.5   0.0    1.5  1  PF02910.15 Fumarate reductase flavoprotein C-term
    0.00033   19.5   1.1     0.0013   17.5   0.1    2.2  3  PF01134.17 Glucose inhibited division protein A
    0.00056   20.1   0.0      0.013   15.7   0.0    2.5  2  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
     0.0006   18.8   2.9     0.0058   15.6   1.3    2.2  2  PF12831.2  FAD dependent oxidoreductase
  ------ inclusion threshold ------
      0.076   12.9   0.2       0.19   11.6   0.1    1.7  1  PF13450.1  NAD(P)-binding Rossmann-like domain
      0.081   11.7   0.1       0.13   11.0   0.1    1.2  1  PF05834.7  Lycopene cyclase protein


Domain annotation for each model (and alignments):
>> PF00890.19  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.8   2.1   3.9e-79     6e-76       1     421 []     139     518 ..     139     518 .. 0.94

  Alignments for each domain:
  == domain 1    score: 255.8 bits;  conditional E-value: 3.9e-79
                 SEEEE-------HHHHHHHCHTT-EEEE-SS-.CCGSGGGG-----B---....GGGSS.S-HHHHHHHHHH-------HHHHHHHHCCHHHHHHHHHC-....-----BGC---B-EE------S--EE-.STT-......---HHHHHHHHHHHC-TTEEEE-SEEEEE--B.G--BB---EEEETTT-SEEEEEES.EEEE-----GG.............GSSSBSS-TT------HHHHC----EE-..TT-EEEECEEES....-TT-B--GGG-----EEE-----B..-H......GGGS-HHHHHHHHH.HHHHH----.-EEEE-TT.S-HHHHCCH-HHHHHHHHHT--......--TTTS-EE.......EEEEEEEE----B-------......S-B--EE-----B---------TTSHH CS
  PF00890.19   1 DvvViGsGlAGlaAAleaaeaglkvavvekeq.etggatawsqGgidavlspeqkkagikdspdlhrtdtlkaldeladqplveafveaapeavdeleel....gvpfsrtedgpvdlrelGglsatrtlhdaadarretlvtghallarllesareagkvdfqerhradeLiv.edgrvtGvvvenprsgrevrirakaavvlatgGfgrdrrallkellgaaaeaettnapantGdgialalragaalnddrmeevqfhPtslvpirdgsgiLitealrgeGgilvdkdGrr..Fm......nelasrdvvsrailekeiaeggseanvyldadhgldaealeatleaineeaengldkdfgrgidpadrpipgpfyavkvvpaqhytmgGvrtdenarvldadgqpipGLYAaGevagggvhganrlgGnsl 421
                 D++ViGsG+AG++ Al+aae g++v++++++  +++ +++w+qGgi   +        ++d ++l   d   a++ +++ ++v  +++++p av+e+        vpf+r++dg ++     ++++ r+ h   d+      tg+a++  l++ +++++++++++ + a++L   ++g+++G+ v  +++g+ v++     +vlatgG+g              ++++t+n+  + Gdg a+a+r ga +++  me +qfhPt l+ i  + + L+tealrgeG+ l+d++ +r  F       +ela+rdvv+r il +e++++++  + yld++h  d++ l+++++ai++++ +  +      id++++p+p       vvpa+hy++gG+r+d+ +r+       +p+LYAaGev ++g+hganrl+++sl
  MMETSP1325-20131115|2613_1 139 DLLVIGSGVAGCSTALKAAELGRSVTMLTAVAdPKQCNSFWAQGGIIYKA--------TDDHRELLESDIHVAGARQSKFEAVSKLAAEGPGAVEEFLLEgslaEVPFDREDDGQLARCFEAAHNRARIIH-WRDH------TGKAIMDSLIQAVNANPNITMLTGCTAVDLALtQSGTCVGAHVLHEETGEVVTLLGG-STVLATGGCGE-------------VYQHTSNPREARGDGVAMAIRCGAVVEN--MEYMQFHPTTLY-IPGERRFLMTEALRGEGARLLDATPERreFAkdyhpdGELAPRDVVARMIL-AEMEKTKT-RHAYLDISH-RDSAWLQKRFPAIYKHCLS-RG------IDITKEPMP-------VVPAAHYHCGGLRVDLAGRT------SVPNLYAAGEVSCTGLHGANRLASTSL 518
                 89*********************99999987516677*********9887........46899999999999999999******************9988899*******888888777778888889999.8998......******************************994588*********************.**********8.............****************************..************.77777779**************998885677*****************999.********.9********.*****************99.77......*********.......********************......*************************98 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   6.6e-10     1e-06       1     196 [.     139     503 ..     139     506 .. 0.76
   2 ?   -2.5   0.0       2.3   3.4e+03      94     128 ..     665     698 ..     606     707 .. 0.71

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 6.6e-10
                 SEEEE----HHHHHHHHHHHTTSEEEEE....CSSSSSTB.TSGGHHHHHHHHHHHHHHHHHHTSH......................................................................HHHHHHHH.CTCEEEHCHEEEEEETTTTEEEEEEEEEEEEEETEEEEEEESEEEE----B----TGCCHTEEEC.SSHHHHHHHHHHCST.......TTEEEEE-.........................................................................................-GGGCHHSS--BES............SSSBBE-TTSBCSSTTEEE---TC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx......................................................................xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxx.........................................................................................xxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9   1 dvviiGgGpaGlsaakdlaqkglkvali....ekeggtcv.nrgclpkkllvevaegreeleelal......................................................................kvvdelek.agieilleknvvkidsgskkvvqeagavkadekgkgrdikydklviAtGarprtlgipgvevailargvedsdeilellek.......pkkvvvvG.........................................................................................tkllaekagveldp............rggivVdeylrtsvpgiyaiGDva 196
                 d+++iG+G+aG+s+a+++a  g  v+++    +  + +++   g++ +k+  +  e  e+  +                                                                         ++++ +++  +i++l++  +v+++ +++  ++ + +v ++e+g+  ++  ++ v+AtG+   + +    + +  + gv  + ++   +e        p ++ + G                                                                                         t            +             gg+ Vd   rtsvp+ ya+G v 
  MMETSP1325-20131115|2613_1 139 DLLVIGSGVAGCSTALKAAELGRSVTMLtavaDPKQCNSFwAQGGIIYKATDDHRELLESDIH--VagarqskfeavsklaaegpgaveefllegslaevpfdreddgqlarcfeaahnrariihwrdhtgkaimdSLIQAVNAnPNITMLTGCTAVDLALTQSG-TCVGAHVLHEETGEVVTLLGGSTVLATGGCGEVYQHTSNPREARGDGVAMAIRCGAVVENmeymqfhPTTLYIPGerrflmtealrgegarlldatperrefakdyhpdgelaprdvvarmilaemektktrhayldishrdsawlqkrfpaiykhclsrgidiT------------KepmpvvpaahyhCGGLRVDLAGRTSVPNLYAAGEVS 503
                 689*************************88874444444446666666666555555554444..0345788888899999999*9999********************************99999999999999877776655567777777777777655554.45555677889999999***********65444433322233333444444444444444444554466999999**************************************************9999999999999999988888888888877766665552............1334444444454799******************986 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.3
                 EEEEEEEEETEEEEEEESEEEE----B----TGCC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9  94 agavkadekgkgrdikydklviAtGarprtlgipg 128
                 + a+++++++ g +  +++ v A+G++ r+ +++g
  MMETSP1325-20131115|2613_1 665 DAATTETATEIGAEAAAEAGVTAPGSS-RCSDVDG 698
                 334556678888899999999999977.4455555 PP

>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.3     6e-10   9.1e-07       1      50 [.     139     195 ..     139     330 .. 0.82

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 6e-10
                 EEEEE----HHHHHHHHHHHTT-EEEEEESS.STTSSCGGGS-EEE-SST......C CS
  PF01266.19   1 dvviiGgGivGlstAyeLarrglkVtllekg.diasgaSgrngglihagl......l 50 
                 d+++iG+G++G+stA+ +a+ g++Vt l +  d+ +  S  ++g i          l
  MMETSP1325-20131115|2613_1 139 DLLVIGSGVAGCSTALKAAELGRSVTMLTAVaDPKQCNSFWAQGGIIYKAtddhreL 195
                 89****************************99***9999766555544422444440 PP

>> PF02910.15  Fumarate reductase flavoprotein C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   9.2e-08   0.00014       1      82 [.     578     653 ..     578     683 .. 0.83

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 9.2e-08
                 HHHHHHHHHHH----B---HHHHHHHHHHHHHHHHTT-------SSS-HHHHHHHHHHHHHHHHHHHH----S--S------ CS
  PF02910.15   1 rkeLqeiMqenagvfRteesLeealkkiaelkerlkkvkvkdkskvlntdlvealelenllelAeaiitaAlaRkESRGaHa 82 
                 r e q+i ++ +g++R+ + Leea++k++e+ + ++      +     +   e + l+n+ ++A ai++aA+a   S G H 
  MMETSP1325-20131115|2613_1 578 RLEVQQITWNLVGIVRQPSLLEEAVSKLEEMLNVAE------ELFLSSKVSSEVVGLRNIATVALAIARAAAANPKSIGTHH 653
                 6799***************************66555......555555567899*******************999999995 PP

>> PF01134.17  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   8.8e-07    0.0013       1      30 [.     139     168 ..     139     182 .. 0.89
   2 ?   -0.5   0.0      0.26     4e+02     101     161 ..     274     341 ..     265     364 .. 0.64
   3 ?   -2.9   0.0       1.4   2.1e+03     354     365 ..     492     503 ..     490     511 .. 0.77

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 8.8e-07
                 SEEEE-------HHHHHHHH----EEEEES CS
  PF01134.17   1 dviViGgGhAGceAAlaaarlGakvlLith 30 
                 d+ ViG G AGc  Al+aa+lG +v+++t 
  MMETSP1325-20131115|2613_1 139 DLLVIGSGVAGCSTALKAAELGRSVTMLTA 168
                 578************************965 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.26
                 HHHHHHTSTTEEEEES.-EEE--BSS.SBB--..-EE.----B-EES...EEEE-----B---EE---- CS
  PF01134.17 101 vteklenepnleiiee.eveelivee.kkvkg..vvt.edgetikak...avviatGtflkgkihigek 161
                 + ++++++pn++++++ ++ +l +++ +++ g  v+  e+ge+++     ++v+atG   +   h+ + 
  MMETSP1325-20131115|2613_1 274 LIQAVNANPNITMLTGcTAVDLALTQsGTCVGahVLHeETGEVVT-LlggSTVLATGGCGEVYQHTSNP 341
                 567888899999998733456665555666664444414444443.2245*******955544444444 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 1.4
                 S-B--EE----- CS
  PF01134.17 354 kvkgLflAGqin 365
                 +v++L++AG+++
  MMETSP1325-20131115|2613_1 492 SVPNLYAAGEVS 503
                 589******985 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   8.4e-06     0.013       2      30 ..     140     168 ..     139     178 .. 0.90
   2 ?    1.5   0.0      0.24   3.6e+02      18      72 ..     250     301 ..     245     311 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 8.4e-06
                 EEEE---HHHHHHHHHHHHTTSEEEEEES CS
  PF00070.22   2 vvvvGGGyiGlElAaalaklgkkVtvier 30 
                 ++v+G+G+ G+  A  +a+lg +Vt++ +
  MMETSP1325-20131115|2613_1 140 LLVIGSGVAGCSTALKAAELGRSVTMLTA 168
                 79***********************9876 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.24
                 HHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHT.TEEEETTEEEEEEEESEEE CS
  PF00070.22  18 laklgkkVtvierrdrllraldeeiakilqkklekn.gievllntkveeiegsadg 72 
                 + +  ++  +i+ rd+      + i + l + + +n +i++l++++++ +  +++g
  MMETSP1325-20131115|2613_1 250 FEAAHNRARIIHWRDHTG----KAIMDSLIQAVNANpNITMLTGCTAVDLALTQSG 301
                 555566777788888877....677777777777778********99988766665 PP

>> PF12831.2  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   1.3   3.8e-06    0.0058       1      28 [.     139     166 ..     139     170 .. 0.95
   2 ?    1.7   0.0     0.061        93      85     147 ..     260     329 ..     213     341 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 3.8e-06
   PF12831.2   1 DvvVvGGgpaGvaAAiaAarlGakvlLv 28 
                 D++V+G g aG+  A++Aa lG++v+++
  MMETSP1325-20131115|2613_1 139 DLLVIGSGVAGCSTALKAAELGRSVTML 166
                 9************************986 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.061
   PF12831.2  85 ltfepevakevleeml....aeagvtvllhtrlvsveke.gdritavtvesks.g.rltirAkvfiDATg 147
                 ++ + ++ k++++ ++    a++++t+l+++++v+   +  ++  + +v +++ g   t+ +  ++ ATg
  MMETSP1325-20131115|2613_1 260 IHWRDHTGKAIMDSLIqavnANPNITMLTGCTAVDLALTqSGTCVGAHVLHEEtGeVVTLLGGSTVLATG 329
                 5667788899999999888899***********9988752335555555555556566666666666665 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00012      0.19       1      25 [.     142     166 ..     142     172 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00012
   PF13450.1   1 IvGaGlsGlvaAylLakagkdvlvl 25 
                 ++G+G++G+++A  +a+ g++v++l
  MMETSP1325-20131115|2613_1 142 VIGSGVAGCSTALKAAELGRSVTML 166
                 8*********************986 PP

>> PF05834.7  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   8.3e-05      0.13       1      41 [.     139     176 ..     139     185 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 8.3e-05
   PF05834.7   1 DlvivGaGlAglllAlrlreakpglrvllidagpkllfgnn 41 
                 Dl+++G G Ag++ Al+   a++g +v+++ a +++    n
  MMETSP1325-20131115|2613_1 139 DLLVIGSGVAGCSTALKA--AELGRSVTMLTAVADP-KQCN 176
                 9***************99..99999***99998888.3334 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (783 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.26u 0.37s 00:00:01.63 Elapsed: 00:00:00.76
# Mc/sec: 2468.88
//
Query:       MMETSP1325-20131115|2625_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|2612_1  [L=853]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-16   61.3   1.3    1.2e-15   57.9   0.0    2.9  2  PF13519.1  von Willebrand factor type A domain
    8.4e-15   54.3   0.0    8.3e-14   51.1   0.0    2.3  2  PF04564.10 U-box domain
    2.3e-07   30.6   0.1      0.013   15.1   0.0    3.1  2  PF00092.23 von Willebrand factor type A domain
    5.4e-06   25.8   0.0    1.1e-05   24.7   0.0    1.4  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
     0.0028   17.0   0.0     0.0056   16.0   0.0    1.4  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   4.2e-19   1.2e-15       2     169 ..     131     410 ..     130     413 .. 0.71
   2 ?   -1.1   1.6      0.56   1.5e+03      57     103 ..     607     647 ..     576     809 .. 0.73

  Alignments for each domain:
  == domain 1    score: 57.9 bits;  conditional E-value: 4.2e-19
   PF13519.1   2 lvlvlDvSgSMnae.dv...............................s.ptrldaakaalkdllde..lpgdrvglvafsgsaelvaplts....draalkaalnsldprlmpgggtnlaaalalalell.....................................................................akad..grraaivlvtDGednssdie....aasalkrag....ikiyvvgvgsdegaeallkelaeatggryfdassdaeeleaal 169
                 + +vlD+SgSM  + d                                   ++l++ak +l ++++    p+d+vg++ f+ +    +plts    d +++++ +  l+p+    ggt+l+++l+ ++++l                                                                     a+ d   +   ++++tD + +++d++     as++++a+    + +++vg+g d +     +++++  ggry+++ s+aee++a +
  MMETSP1325-20131115|2612_1 131 VAIVLDISGSMGSAfDNdaggppirrgppagsrggrgptgfnsfnsfnNfNSKLEVAKRSLLAIMRDglGPDDEVGVILFNHGQTMFLPLTSrsglDMDDFEQRIGGLTPM----GGTSLGDGLQCGMDMLsgvnqagvpttvqgwgsssspfgsfkvekakgkgkakgkgkakakakakaktkpkqskskgkesaaaaaASEDgrPVVSRVIFLTDMQSSQQDEDdvldIASKAADADsasaVFTTIVGIGVDLSV-GAVQSISSTRGGRYLSV-SSAEEFAASV 410
                 78*********66655566889999999999999999998888887752588*************996449*******************96667799***********86....*********666666655555555555555555555555555555555555555555555555444444444444444433333333332245599******76664444434445555444443335889999***99997.99***************.7899988765 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.56
   PF13519.1  57 tsdraal.kaalnsldprlmpgggtnlaaalalalellakadgrraai 103
                 tsdr+ +  + l++ldp        +l +a+a+a +++a+a+++ra +
  MMETSP1325-20131115|2612_1 607 TSDRDEVdMDSLTDLDPA-------KLNEAIATAEQWAARATQARAEL 647
                 555555544556666653.......66677777777776666555444 PP

>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.27   7.3e+02      33      54 ..     559     580 ..     539     593 .. 0.71
   2 !   51.1   0.0     3e-17   8.3e-14       1      65 [.     715     778 ..     715     781 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.27
                 HHHTT.SSB-TTT-SB--GGGS CS
  PF04564.10  33 khllsrdktdPftreplteeel 54 
                 +h   + + dP++ +plt++++
  MMETSP1325-20131115|2612_1 559 SHSATVLAPDPLNGSPLTSSNA 580
                 455557889*********9875 PP

  == domain 2    score: 51.1 bits;  conditional E-value: 3e-17
                 --GGGB-TTT-SB-SSEEE-TT.T-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHH CS
  PF04564.10   1 vPdefldpitlelmkdPvilPs.gitvDrstiekhllsrdktdPftreplteeelipnlelKekId 65 
                 +P+ fl+pit+elm+dPvil + g +++r++ie +l+  ++t+P t++p+ + +l pn++l++ I+
  MMETSP1325-20131115|2612_1 715 IPNDFLCPITRELMRDPVILMDdGFSYERAAIEDWLKL-KSTSPKTNKPT-NGKLAPNRSLRALIA 778
                 8******************97526*************9.*******9995.679********9986 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   4.7e-06     0.013       2      94 ..     131     259 ..     131     269 .. 0.85
   2 !   11.3   0.1   6.7e-05      0.18     101     170 ..     332     404 ..     284     414 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 4.7e-06
                 EEEEEE-STTS-H......................................HHHHHHHHHHHHHHHHH.CCTTTEEEEEEEESSSEEEEE-TCCHHCCSSCGGHH-CCGGSTTS-B-HHHHHHHHHHHTTS CS
  PF00092.23   2 ivfvlDgSgSige......................................enfekvkefikkliekldigpdsvrvglvqyssdaktevslndfkskeellsavsknlkylgggtntgkALkyalenlfs 94 
                 +++vlD+SgS+g                                       +++e +k+ +  +++       ++ vg++ +++  +   +l++ +  +     +++    + ggt +g++L+  +++l  
  MMETSP1325-20131115|2612_1 131 VAIVLDISGSMGSafdndaggppirrgppagsrggrgptgfnsfnsfnnfnSKLEVAKRSLLAIMRDG--LGPDDEVGVILFNHGQTMFLPLTSRSGLDMDDFEQRIGGLTPMGGTSLGDGLQCGMDMLSG 259
                 789**********9998888888888888888888888777777777666666999999999999954..7889********************988888888889999999***********99999865 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 6.7e-05
                 TTSEEEEEEE-----C---STHHHHHHHHHH......GEEEEEEEE--SCCCHHHHHHCS-SSTTCCCB-STSSHH CS
  PF00092.23 101 enapkvvillTDGksndggspeaaaaklrek......klgitvfgvGvsdvdeeelrsiaskpdseghvfrltdfd 170
                   +   vi+lTD +s+ +++++  +++ ++        +  t++g+Gv d +   ++si+  ++ +g++  +++ +
  MMETSP1325-20131115|2612_1 332 RPVVSRVIFLTDMQSSQQDEDDVLDIASKAAdadsasAVFTTIVGIGV-DLSVGAVQSIS--STRGGRYLSVSSAE 404
                 35667799****88887744444444444447799*************.***********..55577776666655 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   4.1e-09   1.1e-05       8      49 ..     716     756 ..     711     766 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 4.1e-09
                 XXX-B-TTT-S.-SS....EEEES.---EEEHHHHHHHHH.HHHT CS
   PF13445.1   8 hsifaCpiske.qsteqnpPvvLp.CGhvisrealeklak.ggrs 49 
                  ++f Cpi++e + +    Pv+L   G  ++r a+e ++k +++s
  MMETSP1325-20131115|2612_1 716 PNDFLCPITRElMRD----PVILMdDGFSYERAAIEDWLKlKSTS 756
                 679**********88....***999**************964444 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.1e-06    0.0056      13      46 ..     720     753 ..     716     765 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.1e-06
                 B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT CS
   PF11789.3  13 kCpltlkpfkePvtskkCnHvFEkeaIlkmlkrk 46 
                  Cp+t++ +++Pv+      ++E+ aI++ lk k
  MMETSP1325-20131115|2612_1 720 LCPITRELMRDPVILMDDGFSYERAAIEDWLKLK 753
                 6****************************99433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (853 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1168  (0.0854301); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.46u 0.36s 00:00:01.81 Elapsed: 00:00:01.24
# Mc/sec: 1648.46
//
Query:       MMETSP1325-20131115|2624_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-87  291.6   0.0    9.3e-87  291.5   0.0    1.0  1  PF00764.14 Arginosuccinate synthase


Domain annotation for each model (and alignments):
>> PF00764.14  Arginosuccinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.5   0.0   6.8e-91   9.3e-87     129     387 ..       3     276 ..       1     277 [. 0.95

  Alignments for each domain:
  == domain 1    score: 291.5 bits;  conditional E-value: 6.8e-91
  PF00764.14 129 slaPdlkviaPvRelelt.....ReeeieyakekgipvpvtkkkpysiDenllgrsieagiLedpkteppediyeltkdpakakdepeeveiefekGvPvsld.....geklevlelikklnelagkhGvGRiDivedRlvglksReiYeapaalvLikahkdleeltlerevlkfkeiveekyaelvYkGlwlsPlkealdafidktqervtGtvrvklykGsvvvlgReselslYdeelvsfdeed.....eldqkeaeGfvkihglqakly 387
                 +l+  +  iaP+R++e+      R++ ++ya+e++ipv++t k  ys+Denl++ s+e+g+Ledp+t p + ++++t+dp++a+d  e ++iefekGvPv+        +k+++le++ +lne+ag++GvGR+Dive+R+vg+ksR++Ye+pa +vL+ ah dle +tl+rev ++++ +++++a l Y+G+w+ P++e +++ ++  q++v+G v ++lykG++++ gRes+++lY+++l+s+d +d     ++++k+++Gf+ki++ + k y
  MMETSP1325-20131115|2624_1   3 ALDATITTIAPWRDPEFLekfkgRTDLLNYAAENNIPVDATPKANYSVDENLFHTSFESGMLEDPMTPPDKSMWKMTVDPTDAPDVGERIRIEFEKGVPVKAIghgdgVTKTDPLEIFMYLNERAGANGVGRLDIVENRFVGIKSRGCYETPAGTVLRAAHLDLEGITLDREVVRIRDRLSAEFATLAYNGFWFAPEMELVKHSLNFVQRHVNGAVEIELYKGNITIKGRESPNALYSSDLASMDIDDggalfDYNPKDSQGFIKINSTRLKAY 276
                 56778999*********9999*******************************************************************************97646554467788***********************************************************************************************************************************988555556899**********9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1350.26
//
Query:       MMETSP1325-20131115|2627_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00016   21.1   0.2     0.0011   18.4   0.0    2.4  2  PF12799.2  Leucine Rich repeats (2 copies)
    0.00023   20.7   0.1    0.00051   19.6   0.1    1.7  1  PF13855.1  Leucine rich repeat
     0.0026   17.5   1.7        1.3    9.1   0.0    3.1  3  PF13516.1  Leucine Rich repeat
      0.008   15.9   1.6        4.8    7.4   0.0    3.6  3  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       0.6     2e+03      26      36 ..      87      98 ..      83     107 .. 0.53
   2 !   18.4   0.0   3.2e-07    0.0011       3      36 ..     111     144 ..     109     158 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.6
   PF12799.2 26 LktLnLsnN.pi 36
                L tL + +N ++
  MMETSP1325-20131115|2627_1 87 LVTLVMCSNsNL 98
                666665443133 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 3.2e-07
   PF12799.2   3 LevLdLsnNnIk.dlppelanLpnLktLnLsnNpi 36 
                 Le+LdLs++ ++ d++  l  +++L +LnL ++++
  MMETSP1325-20131115|2627_1 111 LEYLDLSDTGVSgDIEC-LHMCTKLVYLNLRSTRV 144
                 9***********99***.*************9886 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.1   1.5e-07   0.00051       2      60 ..      86     143 ..      85     144 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 1.5e-07
   PF13855.1   2 nLkeLdLsnNrlkvipd..gaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNr 60 
                 +L +L  ++N  +++++  +++  +  L++LdLs +   s + e+++ +++L +LnL+++r
  MMETSP1325-20131115|2627_1  86 HLVTLVMCSN--SNLCEnmECLAPCRGLEYLDLS-DTGVSGDIECLHMCTKLVYLNLRSTR 143
                 6778888877..55532237**************.666677789*************9986 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2       1.7     6e+03       3      12 ..      86      95 ..      84     105 .. 0.63
   2 !    9.1   0.0   0.00039       1.3       1      17 [.     108     124 ..     108     129 .. 0.86
   3 !    6.4   0.0     0.003        10       1      17 [.     131     147 ..     131     152 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.7
   PF13516.1  3 nLtsLdLsnN 12
                +L +L + +N
  MMETSP1325-20131115|2627_1 86 HLVTLVMCSN 95
                5667765554 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00039
   PF13516.1   1 lknLtsLdLsnNqigde 17 
                 +  L++LdLs+++++++
  MMETSP1325-20131115|2627_1 108 CRGLEYLDLSDTGVSGD 124
                 677**********9876 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.003
   PF13516.1   1 lknLtsLdLsnNqigde 17 
                 +++L +L+L ++ +g++
  MMETSP1325-20131115|2627_1 131 CTKLVYLNLRSTRVGGD 147
                 99***********9986 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1     0.075   2.6e+02       1      14 [.      86     101 ..      86     108 .. 0.77
   2 !    7.4   0.0    0.0014       4.8       2      17 ..     111     127 ..     110     131 .. 0.86
   3 ?    3.5   0.0     0.029        98       1      13 [.     133     145 ..     133     158 .. 0.80

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.075
                 TESEEEETSS.BCB.C CS
  PF00560.28   1 nLeeLdLsgN.nlt.s 14 
                 +L +L + +N nl+ +
  MMETSP1325-20131115|2627_1  86 HLVTLVMCSNsNLCeN 101
                 68899999999**944 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0014
                 ESEEEETSSBCB.CHHH CS
  PF00560.28   2 LeeLdLsgNnlt.slpp 17 
                 Le+LdLs++ ++ ++ +
  MMETSP1325-20131115|2627_1 111 LEYLDLSDTGVSgDIEC 127
                 9********99988876 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.029
                 TESEEEETSSBCB CS
  PF00560.28   1 nLeeLdLsgNnlt 13 
                 +L +L+L+++++ 
  MMETSP1325-20131115|2627_1 133 KLVYLNLRSTRVG 145
                 699*****99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.70
# Mc/sec: 558.01
//
Query:       MMETSP1325-20131115|2629_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00029   20.7   0.1    0.00046   20.1   0.0    1.3  1  PF13921.1  Myb-like DNA-binding domain
     0.0016   18.3   0.5       0.02   14.8   0.0    2.1  2  PF00249.26 Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> PF13921.1  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   6.8e-08   0.00046      31      59 ..      12      40 ..       9      41 .. 0.93

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 6.8e-08
   PF13921.1 31 tplacqdrwknkLrpkisrapwtkeedqk 59
                ++++c  rw + Lrp +++++w++eedq 
  MMETSP1325-20131115|2629_1 12 DATQCLHRWSKVLRPGLKKGKWSAEEDQI 40
                579************************96 PP

>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.033   2.2e+02      37      48 .]      13      24 ..      10      24 .. 0.82
   2 !   14.8   0.0   2.9e-06      0.02       1      21 [.      30      50 ..      30      58 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.033
                HHHHHHHHHHHT CS
  PF00249.26 37 lkqcksrwqkyl 48
                + qc +rw k+l
  MMETSP1325-20131115|2629_1 13 ATQCLHRWSKVL 24
                579*****9875 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 2.9e-06
                TTSS-HHHHHHHHHHHHHTTS CS
  PF00249.26  1 rgrWTteEdellvdavkqlGg 21
                +g+W++eEd++ +d v++ Gg
  MMETSP1325-20131115|2629_1 30 KGKWSAEEDQIMKDMVAEAGG 50
                79***************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 628.48
//
Query:       MMETSP1325-20131115|2631_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.2e-12   44.9   0.9    8.2e-12   44.9   0.6    1.8  2  PF12678.2 RING-H2 zinc finger
    2.6e-05   23.8   1.1    4.3e-05   23.1   0.7    1.3  1  PF12861.2 Anaphase-promoting complex subunit 11 RING-H2 finger
  ------ inclusion threshold ------
        6.6    7.4   9.3        4.9    7.8   0.5    2.7  3  PF09598.5 Stm1


Domain annotation for each model (and alignments):
>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.6   1.8e-15   8.2e-12       1      41 [.      41      83 ..      41     101 .. 0.88
   2 ?   -1.3   0.2      0.48   2.2e+03      14      30 ..     164     180 ..     157     184 .. 0.65

  Alignments for each domain:
  == domain 1    score: 44.9 bits;  conditional E-value: 1.8e-15
   PF12678.2  1 kvkikkwnavalwkwdisednCaiCrneleelcpeckapg..k 41
                +++i+kwnav++w+wdi  d+CaiCrn+l+e+ +e +a+   +
  MMETSP1325-20131115|2631_1 41 RFEIRKWNAVCMWSWDICADTCAICRNSLNEPSIEYQANPspN 83
                699***********************************98532 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.48
   PF12678.2  14 kwdisednCaiCrnele 30 
                 + +i++  C+ C + +e
  MMETSP1325-20131115|2631_1 164 RPEIPTTACVPCEVRCE 180
                 44566667888887775 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.7   9.4e-09   4.3e-05       3      32 ..      42      70 ..      40      81 .. 0.87

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 9.4e-09
   PF12861.2  3 vkikevksvatwswdvasddvcGicrvsfd 32
                 +i+++++v+ wswd+   d+c icr s +
  MMETSP1325-20131115|2631_1 42 FEIRKWNAVCMWSWDICA-DTCAICRNSLN 70
                689*************97.68*****9987 PP

>> PF09598.5  Stm1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.2    0.0098        45      31      53 ..      11      35 ..       4      42 .. 0.69
   2 ?   -2.0   0.1       1.3   5.7e+03      64      68 .]      85      89 ..      76     105 .. 0.53
   3 ?    7.8   0.5    0.0011       4.9      29      60 ..     124     155 ..     116     161 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0098
   PF09598.5 31 tskkrd.kp.kaPnkpaPreqadre 53
                  +k d  + +aP+ paP++ a+ +
  MMETSP1325-20131115|2631_1 11 AEGKTDeMAvDAPAAPAPAAAAAAA 35
                5555555566899999999877555 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.3
   PF09598.5 64 eaaaR 68
                e+a+R
  MMETSP1325-20131115|2631_1 85 ETAFR 89
                22222 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0011
   PF09598.5  29 sttskkrdkpkaPnkpaPreqadrerRgrqap 60 
                  ++s  rd p  P++  P+ q+   +Rg   +
  MMETSP1325-20131115|2631_1 124 PKSSESRDIPSQPPSTGPPGQTPDGTRGVDDA 155
                 578999****8888*****9*98888875544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 829.85
//
Query:       MMETSP1325-20131115|2633_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-08   31.3   0.0    1.6e-07   30.5   0.0    1.3  1  PF02037.22 SAP domain
  ------ inclusion threshold ------
      0.051   12.7   0.1      0.052   12.7   0.1    1.0  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   2.3e-11   1.6e-07       2      33 ..       5      36 ..       4      37 .. 0.93

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 2.3e-11
                TT--HHHHHHHHHHTT------HHHHHHHHHH CS
  PF02037.22  2 skltVaeLKaeLkkrGLptsGkKaeLieRLke 33
                 +l+  eL+ae+kk GL+ +Gk a+L++RL+ 
  MMETSP1325-20131115|2633_1  5 ASLSYRELQAECKKQGLSAGGKTADLVARLTA 36
                68999*************************86 PP

>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   7.7e-06     0.052     211     255 ..      26      71 ..       7      85 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 7.7e-06
                 ---..--CSC--XXXXXXXXXXXXXXXXXXXX.........XXXXX CS
  PF01213.14 211 kkgdaaaaksalaavsasktaaPppPpppppP.svdtikdsvesak 255
                 k+ d +a  +a+aav+ +++++  +Pppp+ P  +++++d+++s++
  MMETSP1325-20131115|2633_1  26 KTADLVARLTAAAAVANEEAKTSEAPPPPAGPtWSSLLQDAYKSKR 71 
                 5566677788888888877777777777777755677777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 400.93
//
Query:       MMETSP1325-20131115|2632_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-19   67.4   0.0    8.5e-19   66.8   0.0    1.3  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    6.3e-13   48.4   0.1    1.1e-12   47.6   0.0    1.4  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    1.4e-08   34.3   0.0    2.8e-08   33.3   0.0    1.5  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.031   13.9   0.4      0.085   12.5   0.1    1.9  2  PF11608.3  Limkain b1


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   0.0   2.5e-22   8.5e-19       1      70 []     181     251 ..     181     251 .. 0.99

  Alignments for each domain:
  == domain 1    score: 66.8 bits;  conditional E-value: 2.5e-22
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBEE CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseedaekAlealngkklggrelk 70 
                 lfVg+L + +te  L+++F+ +G+++ +++++d +tg + g++fV+++s+ da +A+e++++  +ggr+++
  MMETSP1325-20131115|2632_1 181 LFVGDLARQTTEAMLEDVFKTVGDVVAVSIKKDkRTGHHLGYGFVKMASHADALRAKEKMHNADVGGRRIR 251
                 8*******************************************************************996 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.0   3.1e-16   1.1e-12       1      69 []     181     251 ..     181     251 .. 0.97

  Alignments for each domain:
  == domain 1    score: 47.6 bits;  conditional E-value: 3.1e-16
   PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkalkkln.lvlkgrtir 69 
                 l+v+ l +++te+ l + f+  g+v  v+i+++k+ g   g++fv+++s++dA +a +k++   ++gr ir
  MMETSP1325-20131115|2632_1 181 LFVGDLARQTTEAMLEDVFKTVGDVVAVSIKKDKRtGHHLGYGFVKMASHADALRAKEKMHnADVGGRRIR 251
                 79*********************************************************888******997 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.0   8.3e-12   2.8e-08       5      56 .]     199     255 ..     197     255 .. 0.92

  Alignments for each domain:
  == domain 1    score: 33.3 bits;  conditional E-value: 8.3e-12
   PF13893.1   5 fskfGkverikifrkk.....ggqAfvefdtveaArkakeylngvklygktLkveys 56 
                 f  +G+v+ + i ++k      g++fv+++++++A +ake++++++ +g++++v ++
  MMETSP1325-20131115|2632_1 199 FKTVGDVVAVSIKKDKrtghhLGYGFVKMASHADALRAKEKMHNADVGGRRIRVGWA 255
                 88999**999999999987766********************************887 PP

>> PF11608.3  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.3   4.5e+03      60      74 ..     115     129 ..      94     143 .. 0.59
   2 ?   12.5   0.1   2.5e-05     0.085      44      72 ..     225     253 ..     218     259 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 1.3
   PF11608.3  60 eneDvfGnritvses 74 
                   e vfG+    +++
  MMETSP1325-20131115|2632_1 115 GSESVFGEAADAKQK 129
                 457777765554444 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 2.5e-05
   PF11608.3  44 lrfanqeaaeRalkRleneDvfGnritvs 72 
                 ++ a++  a Ra+ ++ n Dv G+ri v 
  MMETSP1325-20131115|2632_1 225 VKMASHADALRAKEKMHNADVGGRRIRVG 253
                 77889999******************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.59
# Mc/sec: 1056.02
//
Query:       MMETSP1325-20131115|2634_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1341.04
//
Query:       MMETSP1325-20131115|2635_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 727.17
//
Query:       MMETSP1325-20131115|2636_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 227.65
//
Query:       MMETSP1325-20131115|2637_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       646  (0.0472499); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|2630_1  [L=612]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     1e-200  667.1   0.0     2e-199  662.8   0.0    2.0  2  PF01293.15 Phosphoenolpyruvate carboxykinase
  ------ inclusion threshold ------
      0.015   15.5   0.1       0.91    9.7   0.0    2.5  2  PF13238.1  AAA domain
       0.13   11.4   0.0       0.24   10.6   0.0    1.4  1  PF13481.1  AAA domain
       0.17   11.6   0.0       0.39   10.4   0.0    1.5  1  PF13671.1  AAA domain


Domain annotation for each model (and alignments):
>> PF01293.15  Phosphoenolpyruvate carboxykinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  662.8   0.0  5.8e-203    2e-199       3     450 ..      47     499 ..      45     514 .. 0.97
   2 ?    2.3   0.0     0.012        43     447     466 ..     544     563 ..     532     564 .. 0.89

  Alignments for each domain:
  == domain 1    score: 662.8 bits;  conditional E-value: 5.8e-203
  PF01293.15   3 aevlrnlslaeLveealkekegkltk.tgalvvetgkktgRspkdkfivkee..stedkiwWgkvnkpiseekfdalkekvleylsek.elfvvdlfaGadeeyrlkvrvvtekawhalfvknllirp.teeeleefepdftvinapefkadperd.glnsetvviinleekivlilGteYagEmkksifsvmnyllpkkgvlsmhcsanvgedgdvalfFGlsGTGKTTLsadperkLigdDehgwsdegvfnfeggcYaKtinLseekepeiynaikfgavleNvvvdeetrevdfddtsltentrvayplehienavepavaghpkniifLtadafgvlPpvskLtkeqamyhFlsGytakvagtEagvtepeatfsacfgapFlplhptvyAelLaekikkhgvkvyLvNtGwtggkygvGkriklketraiidailsgslekaefetdp 450
                  ++++n +++eL e++ +++eg +++  g ++v+tg +tgRsp+dk+ivk+e  ++++++wWgkvn+p+++e fd+l ek++++ ++  + +v+d+f+Ga+  ++ kvr+v e aw+++fv+n++irp t+ e++ef+pdft+ina++  ++++++ glnse++v++n+e+k+++ilGt+Y gE kk+ifs+mny+lp +g+++mhcsan+g++gd+alfFGlsGTGKTTLsadp r+LigdDehgw+d+g+fnfeggcYaKtinLsee+ep+iy+aik++a+leNv++d e++++d+ + ++t+n rv+yp++hi+n++ ++++ghp+n+ifLt+dafgvlPpvskL++ q+my FlsGytakvagtE+gvtepeatfsacfga+Fl+ hpt+yA+lLaek++khg+++yLvNtGw+gg +gvG+r+++ +tra+i+ail+gs++++efe+ +
  MMETSP1325-20131115|2630_1  47 GTIYKNQTYEELAEHEERNNEGIFSNhDGCFAVDTGVFTGRSPSDKWIVKNEgsESDKNLWWGKVNQPMKPEVFDELFEKAVNHFNTLeKAYVFDGFCGASLASQKKVRFVHELAWQQHFVTNMFIRPeTAAEIAEFDPDFTIINACSQVNEKWEEhGLNSEVAVAVNIEKKVAVILGTWYGGENKKGIFSLMNYWLPLEGIMPMHCSANIGKNGDTALFFGLSGTGKTTLSADPARNLIGDDEHGWDDDGTFNFEGGCYAKTINLSEETEPDIYRAIKRDAMLENVFLD-ENGTPDYFNVEKTQNGRVSYPIHHIPNHEPSSTGGHPQNVIFLTCDAFGVLPPVSKLSSGQVMYQFLSGYTAKVAGTERGVTEPEATFSACFGAAFLTIHPTRYADLLAEKLEKHGSDAYLVNTGWSGGGVGVGERMSIGATRACISAILDGSIKDVEFEKXE 499
                 589*****************9998752699*******************9972256689****************************99***************************************667899**************999999888************************************************************************************************************************************7.78*************************************************************************************************************************************************************9865 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.012
  PF01293.15 447 etdpvfglevpkevpgvdse 466
                  +dpvfg++vp ++pgv+++
  MMETSP1325-20131115|2630_1 544 LQDPVFGFDVPLSLPGVPDD 563
                 589***************97 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.026        90      30      91 ..      94     153 ..      51     173 .. 0.75
   2 ?    9.7   0.0   0.00027      0.91       3      54 ..     266     331 ..     265     383 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.026
   PF13238.1  30 akengleeevddkidtkeskeldedkldelldkleeneselaegenviidghlaeleledlk 91 
                 + +n+ +e++ + ++ k ++ +++++ del++k  ++ +  + ++ +++dg+++  +  + k
  MMETSP1325-20131115|2630_1  94 IVKNEGSESDKNLWWGKVNQPMKPEVFDELFEKAVNHFN--TLEKAYVFDGFCGASLASQKK 153
                 445555555666679999999999999999999999987..999999*****9987666555 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00027
   PF13238.1   3 itGtpGvGKtTlakeLaerl..............gdvlrdlakengleeevddkidtkeskelded 54 
                 + G +G+GKtTl+   a++l                   ++ak  +l+ee +++i+++ ++++  +
  MMETSP1325-20131115|2630_1 266 FFGLSGTGKTTLSADPARNLigddehgwdddgtfNFEGGCYAKTINLSEETEPDIYRAIKRDAMLE 331
                 679***********9999999999999999999999999999999999999999666655555444 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   7.1e-05      0.24      33      59 ..     261     291 ..     247     326 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 7.1e-05
   PF13481.1  33 gsltllaGapgtGKStlalqlaaava....t 59 
                 g  +l++G +gtGK+tl ++ a +++    +
  MMETSP1325-20131115|2630_1 261 GDTALFFGLSGTGKTTLSADPARNLIgddeH 291
                 8899****************99999865443 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00011      0.39       3      19 ..     265     281 ..     264     290 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00011
   PF13671.1   3 llvGlpGsGKstlaerl 19 
                 l+ Gl+G+GK+tl+   
  MMETSP1325-20131115|2630_1 265 LFFGLSGTGKTTLSADP 281
                 799**********9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (612 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.02u 0.35s 00:00:01.37 Elapsed: 00:00:00.62
# Mc/sec: 2365.44
//
Query:       MMETSP1325-20131115|2639_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 407.89
//
Query:       MMETSP1325-20131115|2640_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 1230.44
//
Query:       MMETSP1325-20131115|2645_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 452.14
//
Query:       MMETSP1325-20131115|2646_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-08   32.8   0.1    1.5e-07   31.3   0.1    1.8  1  PF13499.1  EF-hand domain pair
    1.1e-07   30.4   0.1     0.0046   16.0   0.0    2.6  2  PF00036.27 EF hand
      2e-07   29.8   0.0     0.0011   18.1   0.0    2.5  2  PF13202.1  EF hand
      4e-07   29.4   0.9     0.0095   15.4   0.0    2.6  3  PF13833.1  EF-hand domain pair
    5.9e-07   28.7   0.1      0.001   18.6   0.0    2.5  2  PF13405.1  EF-hand domain


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.1   5.4e-11   1.5e-07       5      64 ..     103     169 ..      81     171 .. 0.89

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 5.4e-11
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgsels.......deevrevldyifkelDkngdGvlsfeEflq 64 
                 aFk++D dgdg l+ e+++ + ++ +   +       +  ++ v  ++++elD+n+dG++s+  f  
  MMETSP1325-20131115|2646_1 103 AFKAMDADGDGILTWEDIESHVTKRLMRGRtssyvtgQAAIDLVMSKLMDELDTNKDGLVSWITFSD 169
                 7***********************9987779999999999999******************966665 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.7e-06    0.0046       4      24 ..     102     122 ..     100     127 .. 0.86
   2 !   12.0   0.0   3.3e-05      0.09       4      19 ..     149     164 ..     146     173 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.7e-06
                 HHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfke 24 
                  aFk +D DgdG ++ e+  +
  MMETSP1325-20131115|2646_1 102 AAFKAMDADGDGILTWEDIES 122
                 59**************99866 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 3.3e-05
                 HHHHHHCTTTSSEBEH CS
  PF00036.27   4 eaFkefDkDgdGkIsf 19 
                 ++++e+D+++dG +s 
  MMETSP1325-20131115|2646_1 149 KLMDELDTNKDGLVSW 164
                 89**********9986 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   3.9e-07    0.0011       3      21 ..     102     120 ..     101     128 .. 0.88
   2 !    9.0   0.0   0.00029      0.78       4      17 ..     150     163 ..     147     164 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 3.9e-07
                 HHHHHH--S----B-HHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreEL 21 
                 ++F+a+D++gDG ++ e+ 
  MMETSP1325-20131115|2646_1 102 AAFKAMDADGDGILTWEDI 120
                 57************99975 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00029
                 HHHHH--S----B- CS
   PF13202.1   4 tFrafDlNgDGkIs 17 
                 + +++D+N+DG +s
  MMETSP1325-20131115|2646_1 150 LMDELDTNKDGLVS 163
                 6789*******887 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.2   6.1e+03      18      32 ..      25      38 ..      23      39 .. 0.74
   2 !   15.4   0.0   3.5e-06    0.0095      30      46 ..     103     119 ..      97     120 .. 0.91
   3 !   11.8   0.1   4.6e-05      0.12      30      45 ..     150     165 ..     144     169 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 2.2
   PF13833.1 18 glkglseeevdilfr 32
                gl+ ++++e+ + +r
  MMETSP1325-20131115|2646_1 25 GLS-FTPNELFAEIR 38
                677.99999877765 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 3.5e-06
   PF13833.1  30 lfrefDtdgdGkisfeE 46 
                  f+++D+dgdG++++e+
  MMETSP1325-20131115|2646_1 103 AFKAMDADGDGILTWED 119
                 69*************98 PP

  == domain 3    score: 11.8 bits;  conditional E-value: 4.6e-05
   PF13833.1  30 lfrefDtdgdGkisfe 45 
                 l++e+Dt++dG +s+ 
  MMETSP1325-20131115|2646_1 150 LMDELDTNKDGLVSWI 165
                 89************96 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   3.7e-07     0.001       4      27 ..     102     125 ..      99     132 .. 0.88
   2 !    7.4   0.0    0.0014         4       6      27 ..     151     172 ..     147     178 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 3.7e-07
                 ---GCC-------B---HHHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                 +aFk++D dgdG +++e++ ++ +
  MMETSP1325-20131115|2646_1 102 AAFKAMDADGDGILTWEDIESHVT 125
                 69****************988665 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0014
                 -GCC-------B---HHHHHHH CS
   PF13405.1   6 FklfDkdgdGkidaeELrdaLr 27 
                  + +D+++dG +++  + d++r
  MMETSP1325-20131115|2646_1 151 MDELDTNKDGLVSWITFSDWYR 172
                 5789********9988888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.32s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1017.12
//
Query:       MMETSP1325-20131115|2647_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.092   12.4   0.1       0.21   11.2   0.0    1.6  2  PF02609.11 Exonuclease VII small subunit


Domain annotation for each model (and alignments):
>> PF02609.11  Exonuclease VII small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.6e-05      0.21       4      21 ..      11      28 ..      10      31 .. 0.90
   2 ?   -1.7   0.0      0.16   2.2e+03      12      19 ..      31      38 ..      27      39 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.6e-05
  PF02609.11  4 alaeLeeivekLEsgels 21
                ++a Lee v+ +E+g+l 
  MMETSP1325-20131115|2647_1 11 KIAYLEETVRAMEQGSLK 28
                6899***********996 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.16
  PF02609.11 12 vekLEsge 19
                v+ LE+++
  MMETSP1325-20131115|2647_1 31 VRSLENEN 38
                88899976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|2648_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-05   24.0   0.4    4.3e-05   23.1   0.3    1.5  1  PF10557.4 Cullin protein neddylation domain


Domain annotation for each model (and alignments):
>> PF10557.4  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.3   3.2e-09   4.3e-05       2      20 ..      63      81 ..      62      82 .] 0.92

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 3.2e-09
   PF10557.4  2 eedrkleieaaIVriMKsr 20
                 +dr+++i+aa+VriMK+r
  MMETSP1325-20131115|2648_1 63 FRDRQYQIDAAVVRIMKAR 81
                68***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       703  (0.051419); expected 273.4 (0.02)
Passed bias filter:                      482  (0.0352545); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|2650_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|2649_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 688.95
//
Query:       MMETSP1325-20131115|2651_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-06   28.1   0.0    3.6e-06   27.2   0.0    1.5  1  PF00005.22 ABC transporter


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0   2.6e-10   3.6e-06      32     117 ..      44     143 ..       8     144 .. 0.87

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 2.6e-10
                 HHHHHEEEE-------..--BHHHHHH----S--....-HHHHHHHHHH---HH.HH--........----------HHHHHHHHHHTT--SEEEEESTT CS
                 xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxx.xxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  32 leklrigyipqdpllf.peltvrenldmakeekk....tdkrieevlekvglde.lldk........srvstLSgGqkqrvalArallkkpklllLDEPt 117
                   +lr+  + qdp    p+ tv +nl ++ + k     + +r+ ++++++gl++ l+d+        + + ++S   +  + l ral+ +p++l+L  Pt
  MMETSP1325-20131115|2651_1  44 PPHLRVVEVGQDPIVLgPHETVADNLLYGLRGKYnreqELQRALRIMKRLGLSQrLIDHantehllgEHGCKISRTDRTLIHLGRALVMNPEVLVLHKPT 143
                 4567789999****99*************99987999999**************77777*************************************8887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1279.56
//
Query:       MMETSP1325-20131115|2655_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 809.34
//
Query:       MMETSP1325-20131115|2657_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 429.54
//
Query:       MMETSP1325-20131115|2653_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-09   35.5   0.0    9.2e-05   22.7   0.0    3.3  2  PF13637.1  Ankyrin repeats (many copies)
    1.1e-08   35.1   0.0    1.8e-07   31.2   0.0    2.2  2  PF12796.2  Ankyrin repeats (3 copies)
    1.3e-06   27.9   0.0      0.041   14.0   0.0    3.5  4  PF13606.1  Ankyrin repeat
    1.4e-06   27.6   0.0     0.0083   15.7   0.0    3.4  3  PF00023.25 Ankyrin repeat
    5.6e-05   23.1   0.0      0.044   13.9   0.0    3.8  4  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   3.4e-08   9.2e-05       4      53 ..       2      53 ..       2      54 .. 0.93
   2 !   14.5   0.0   1.2e-05     0.034       3      53 ..      36     121 ..      34     123 .. 0.70

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 3.4e-08
   PF13637.1  4 aLhyaaisgrlelvklLlekgid..inrtdesGntaLhiAalrgnieilklL 53
                a+h a+++gr++++++L ekg +  in  d +G ++L   + +++i+ + + 
  MMETSP1325-20131115|2653_1  2 AFHSACQQGRTDICAWLKEKGSSdlINVPDTRGKSPLFWSVFYNRIDTALWM 53
                68******************988899999****************9988775 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 1.2e-05
   PF13637.1   3 taLhyaaisgrlelvklLlekgid...................................inrtdesGntaLhiAalrgnieilklL 53 
                 ++L++ + ++r++++ +++++g+d                                   i  td+s  +++ +A+l++ +   klL
  MMETSP1325-20131115|2653_1  36 SPLFWSVFYNRIDTALWMIAHGADpciitadqhatifaaacqyctpnfvaelasrvpghIALTDASDLSPMNYALLGNKVPTMKLL 121
                 689*********************66666666666666666666666666666666666666666666666666666666666555 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   6.7e-11   1.8e-07       2      78 ..       4      87 ..       3      94 .. 0.72
   2 ?    1.6   0.0      0.12   3.2e+02      29      50 ..     105     126 ..      65     137 .. 0.62

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 6.7e-11
   PF12796.2  2 hlAaengnlelvklLlekgadvdl......getpLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklL 78
                h A+++g+ +++ +L ekg +  +      g++pL++ + +++++++ +++++gad++  + ++  t   +A++++    v  L
  MMETSP1325-20131115|2653_1  4 HSACQQGRTDICAWLKEKGSSDLInvpdtrGKSPLFWSVFYNRIDTALWMIAHGADPCIITaDQHATIFAAACQYCTPNFVAEL 87
                888888888888888888844443346666667888888888888888888888888777766777777777777777776666 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.12
   PF12796.2  29 pLhlAaeagnleivklLleaga 50 
                 p+ +A+  +++ ++klL+  g 
  MMETSP1325-20131115|2653_1 105 PMNYALLGNKVPTMKLLVLLGV 126
                 6666666666666666665444 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   1.5e-05     0.041       5      26 ..       2      23 ..       1      29 [. 0.85
   2 !    9.5   0.0   0.00043       1.2       2      28 ..      34      60 ..      33      62 .. 0.93
   3 ?   -1.5   0.0       1.5     4e+03       8      21 ..      74      87 ..      69      95 .. 0.74
   4 ?   -1.7   0.0       1.7   4.7e+03       4      27 ..     104     127 ..     102     129 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.5e-05
   PF13606.1  5 pLhlAasngrielveaLlenga 26
                ++h A+++gr++++ +L e+g 
  MMETSP1325-20131115|2653_1  2 AFHSACQQGRTDICAWLKEKGS 23
                79******************95 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00043
   PF13606.1  2 GnTpLhlAasngrielveaLlengadi 28
                G +pL++ + ++ri+ + +++ +gad+
  MMETSP1325-20131115|2653_1 34 GKSPLFWSVFYNRIDTALWMIAHGADP 60
                779***********************7 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 1.5
   PF13606.1  8 lAasngrielveaL 21
                 A++++ +++v +L
  MMETSP1325-20131115|2653_1 74 AACQYCTPNFVAEL 87
                58888888888776 PP

  == domain 4    score: -1.7 bits;  conditional E-value: 1.7
   PF13606.1   4 TpLhlAasngrielveaLlengad 27 
                 +p+ +A+  +++  +++L+  g+ 
  MMETSP1325-20131115|2653_1 104 SPMNYALLGNKVPTMKLLVLLGVP 127
                 678888888889999999887765 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0013       3.6       6      27 ..       3      24 ..       2      27 .. 0.89
   2 !   15.7   0.0     3e-06    0.0083       2      32 ..      34      64 ..      33      65 .. 0.94
   3 ?   -0.5   0.0      0.41   1.1e+03       5      32 ..     105     132 ..     102     133 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0013
                HHHHHHTTHHHHHHHHHHTTSS CS
  PF00023.25  6 LHlAalrgnlevvklLlsqGAd 27
                 H A++ g+++++ +L ++G +
  MMETSP1325-20131115|2653_1  3 FHSACQQGRTDICAWLKEKGSS 24
                7***************998875 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 3e-06
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                G +PL + +++++++ + + + +GAd+++ +
  MMETSP1325-20131115|2653_1 34 GKSPLFWSVFYNRIDTALWMIAHGADPCIIT 64
                899************************9976 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.41
                 HHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   5 PLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 P  +A l + +  +klL+  G  +  qd
  MMETSP1325-20131115|2653_1 105 PMNYALLGNKVPTMKLLVLLGVPIRRQD 132
                 66789999999999***99888776665 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.025        70      19      35 ..       2      18 ..       1      22 [. 0.92
   2 !   13.9   0.0   1.6e-05     0.044       3      42 ..      20      60 ..      18      66 .. 0.94
   3 ?    0.5   0.0      0.25   6.9e+02      11      46 ..      97     132 ..      87     133 .. 0.71
   4 ?   -0.9   0.0      0.73     2e+03      25      36 ..     203     214 ..     193     224 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.025
   PF13857.1 19 pLhlAakggalevvrlL 35
                ++h A+ +g+++++ +L
  MMETSP1325-20131115|2653_1  2 AFHSACQQGRTDICAWL 18
                68************998 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 1.6e-05
   PF13857.1  3 ehg.padvnatdeggntpLhlAakggalevvrlLlapgadl 42
                e+g ++ +n  d++g +pL + + +++ + + +++a+gad+
  MMETSP1325-20131115|2653_1 20 EKGsSDLINVPDTRGKSPLFWSVFYNRIDTALWMIAHGADP 60
                78999*********************************995 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.25
   PF13857.1  11 atdeggntpLhlAakggalevvrlLlapgadlnlrd 46 
                  td +  +p  +A  g+ ++ ++lL+  g+ ++ +d
  MMETSP1325-20131115|2653_1  97 LTDASDLSPMNYALLGNKVPTMKLLVLLGVPIRRQD 132
                 444444589999999999999999987776666655 PP

  == domain 4    score: -0.9 bits;  conditional E-value: 0.73
   PF13857.1  25 kggalevvrlLl 36 
                 +ggal+ vr++l
  MMETSP1325-20131115|2653_1 203 RGGALTEVRMIL 214
                 499*******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1365.92
//
Query:       MMETSP1325-20131115|2656_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1227.52
//
Query:       MMETSP1325-20131115|2658_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-16   60.4   0.0    1.6e-16   60.2   0.0    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
    2.1e-15   56.6   0.0    4.1e-07   30.2   0.0    2.0  2  PF13637.1  Ankyrin repeats (many copies)
    6.9e-14   50.7   0.0      1e-05   24.9   0.0    3.0  3  PF00023.25 Ankyrin repeat
    1.4e-10   40.2   0.0    0.00027   20.7   0.0    2.9  3  PF13606.1  Ankyrin repeat
    1.3e-09   37.8   0.0    9.7e-08   31.9   0.0    2.3  2  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.093   11.9   0.0        4.7    6.3   0.0    2.0  2  PF04069.7  Substrate binding domain of ABC-type glycine betaine transport system


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   0.0     7e-20   1.6e-16      13      83 ..       2      76 ..       1      77 [] 0.96

  Alignments for each domain:
  == domain 1    score: 60.2 bits;  conditional E-value: 7e-20
   PF12796.2 13 vklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83
                v+ L+e ga+v++    g tp+++Aa++g++++v+lL e ga+v++ +k+g tp ++A+ ngh+e+v++L e ga
  MMETSP1325-20131115|2658_1  2 VRVLHELGANVETpdedGATPVFIAAQNGQVKVVRLLYELGANVETPKKDGATPVFIAAANGHVEVVRVLDELGA 76
                899***********999999**************************************************98887 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   1.8e-10   4.1e-07      16      53 ..       1      38 [.       1      39 [. 0.97
   2 !   29.9   0.0   2.3e-10   5.2e-07      12      53 ..      30      71 ..      30      71 .. 0.96

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 1.8e-10
   PF13637.1 16 lvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                +v+ L+e g+++   de+G t++ iAa++g++++++lL
  MMETSP1325-20131115|2658_1  1 VVRVLHELGANVETPDEDGATPVFIAAQNGQVKVVRLL 38
                699**********************************9 PP

  == domain 2    score: 29.9 bits;  conditional E-value: 2.3e-10
   PF13637.1 12 grlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                g +++v+lL+e g+++    ++G t++ iAa +g++e+++ L
  MMETSP1325-20131115|2658_1 30 GQVKVVRLLYELGANVETPKKDGATPVFIAAANGHVEVVRVL 71
                6799************9999*******************987 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.033        74      17      30 ..       1      14 [.       1      17 [. 0.85
   2 !   24.9   0.0   4.5e-09     1e-05       1      28 [.      18      45 ..      18      48 .. 0.96
   3 !   19.5   0.0   2.2e-07   0.00051       1      26 [.      51      76 ..      51      77 .] 0.93

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.033
                HHHHHHHTTSSTTH CS
  PF00023.25 17 vvklLlsqGAdlna 30
                vv+ L + GA++  
  MMETSP1325-20131115|2658_1  1 VVRVLHELGANVET 14
                899********975 PP

  == domain 2    score: 24.9 bits;  conditional E-value: 4.5e-09
                TSCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdl 28
                dG TP  +Aa++g+++vv+lL + GA++
  MMETSP1325-20131115|2658_1 18 DGATPVFIAAQNGQVKVVRLLYELGANV 45
                8**************************8 PP

  == domain 3    score: 19.5 bits;  conditional E-value: 2.2e-07
                TSCBHHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGA 26
                dG TP  +Aa +g++evv+ L + GA
  MMETSP1325-20131115|2658_1 51 DGATPVFIAAANGHVEVVRVLDELGA 76
                8*******************987777 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.26     6e+02      17      29 ..       1      13 [.       1      14 [. 0.85
   2 !   20.7   0.0   1.2e-07   0.00027       1      29 [.      18      46 ..      18      47 .. 0.94
   3 !   15.1   0.0   7.6e-06     0.017       1      21 [.      51      71 ..      51      76 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.26
   PF13606.1 17 lveaLlengadin 29
                +v+ L e ga++ 
  MMETSP1325-20131115|2658_1  1 VVRVLHELGANVE 13
                689999****985 PP

  == domain 2    score: 20.7 bits;  conditional E-value: 1.2e-07
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +G Tp ++Aa+ng++++v++L e ga++ 
  MMETSP1325-20131115|2658_1 18 DGATPVFIAAQNGQVKVVRLLYELGANVE 46
                688***********************985 PP

  == domain 3    score: 15.1 bits;  conditional E-value: 7.6e-06
   PF13606.1  1 nGnTpLhlAasngrielveaL 21
                +G Tp ++Aa ng++e+v+ L
  MMETSP1325-20131115|2658_1 51 DGATPVFIAAANGHVEVVRVL 71
                688***************997 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.0   4.3e-11   9.7e-08       1      56 []       5      59 ..       5      59 .. 0.97
   2 !    5.8   0.0    0.0067        15      22      35 ..      58      71 ..      58      75 .. 0.93

  Alignments for each domain:
  == domain 1    score: 31.9 bits;  conditional E-value: 4.3e-11
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                L+e g a+v + de g tp  +Aa +g++ vvrlL++ ga+  +  +dg t++ +A
  MMETSP1325-20131115|2658_1  5 LHELG-ANVETPDEDGATPVFIAAQNGQVKVVRLLYELGANVETPKKDGATPVFIA 59
                89999.**********************************************9988 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0067
   PF13857.1 22 lAakggalevvrlL 35
                +Aa +g++evvr L
  MMETSP1325-20131115|2658_1 58 IAAANGHVEVVRVL 71
                59*********987 PP

>> PF04069.7  Substrate binding domain of ABC-type glycine betaine transport system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0021       4.7      22      53 ..       3      34 ..       1      36 [. 0.91
   2 ?    4.4   0.0    0.0078        18      22      53 ..      36      67 ..      34      70 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0021
                HHHHHHS-EEEEEEE--HHHHHHHHHTTSSSE CS
   PF04069.7 22 qllekkGykveltnlgstavlfaalasGdiDv 53
                 +l ++G++ve++  ++ +++f a ++G++ v
  MMETSP1325-20131115|2658_1  3 RVLHELGANVETPDEDGATPVFIAAQNGQVKV 34
                6899*************************977 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0078
                HHHHHHS-EEEEEEE--HHHHHHHHHTTSSSE CS
   PF04069.7 22 qllekkGykveltnlgstavlfaalasGdiDv 53
                 ll ++G++ve+++ ++ +++f a a+G + v
  MMETSP1325-20131115|2658_1 36 RLLYELGANVETPKKDGATPVFIAAANGHVEV 67
                578899***********9**********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|2660_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   22.3   6.7     0.0086   16.2   0.2    1.6  2  PF13517.1  Family description
    0.00029   20.3   2.7    0.00062   19.2   1.8    1.6  1  PF01839.18 FG-GAP repeat


Domain annotation for each model (and alignments):
>> PF13517.1  Family description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   1.3e-06    0.0086      45      61 .]      58      74 ..      24      74 .. 0.75
   2 !   15.2   1.2   2.7e-06     0.019       1      32 [.      63      98 ..      63     116 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.3e-06
   PF13517.1 45 gvafgDldgDGdlDllv 61
                 + +gD+dgDG +D+lv
  MMETSP1325-20131115|2660_1 58 RPIVGDFDGDGAADVLV 74
                589************98 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 2.7e-06
   PF13517.1  1 DldgDGdlDlvvagdgglrl....ylnngdGtftdv 32
                D+dgDG  D++v++d++++     y+  g G f  +
  MMETSP1325-20131115|2660_1 63 DFDGDGAADVLVVSDDAIWGfslqYVPGGGGAFRLI 98
                9************98774431113333356666655 PP

>> PF01839.18  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   1.8   9.1e-08   0.00062       7      28 ..      61      78 ..      58      97 .. 0.72

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 9.1e-08
                EE-TT---S-EEEEETEECTCE CS
  PF01839.18  7 vgDfnGDGrpDlavGpmggghn 28
                vgDf+GDG +D++v     +++
  MMETSP1325-20131115|2660_1 61 VGDFDGDGAADVLVV----SDD 78
                8*************5....333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 703.61
//
Query:       MMETSP1325-20131115|2661_1  [L=736]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-73  245.8   0.0    8.2e-73  245.4   0.0    1.1  1  PF01411.14 tRNA synthetases class II (A)
    3.7e-10   39.4   0.0    8.2e-10   38.3   0.0    1.7  1  PF07973.9  Threonyl and Alanyl tRNA synthetase second additional domain
    0.00011   21.7   2.0    0.00019   20.9   0.3    2.3  2  PF02272.14 DHHA1 domain


Domain annotation for each model (and alignments):
>> PF01411.14  tRNA synthetases class II (A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.4   0.0   1.8e-76   8.2e-73     272     552 .]       2     302 ..       1     302 [. 0.84

  Alignments for each domain:
  == domain 1    score: 245.4 bits;  conditional E-value: 1.8e-76
                 HHHHHHHHHHHHHHHH----SSSS----HHHHHHHHHHHHH.HHTT--S-.HHHHHHHHHHHHTTT-THHHHCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHC..HSSB-HHHHHHHHHH----HHHHHHHHCT---BB---TTHHHHHHHTCTCTT------.........-SSSTTTTS--GEETHCCC-......TT-............----EEEEEEET.TEEEESEE-S-------------EEE--..-EE-EEEEEE----EEEEES--.-------EEE----HHH CS
  PF01411.14 272 lrviaDHvralaflladGvvpsnegrgYvlRrllRravrha.kkLglkeaflaklvavvvevlgdaypelkekeetveeiieeEeerFakTlerGlklleelikklkk..sktlsgedafkLydtyGfPvdltkeiaeekglkvdiegfekameeqrerskkekkekk......llekdvealkelkkteeflgyeel.eaeakilallk.......dkefveeveegqe.gvvvLdrtpfYaesGGqigDeGviekeg..aefkvkdvqkakgvvvhkgkleegklkvgdkvkakvdekr 552
                 +rv+aDH+r+l+f ++dG+ p+n+grgYvlRr+lRrav ++ + Lg+k +f++klv+ vve +gd+++e+ ++++ v+ ++ eEe++F+kT+++Glk++++++++lk    ++++g+d f L  + GfP+dlt+ +ae+ g++vd eg+e++ e++ +++  +  e++      + e+ +   +++ +t++  +y+   + ea+i+a+++       +k f+ ++++ +e +++vLd+tpfY+e GGq++D+G i + +  + ++v+dvq+++g+v+h+g++++g+l vgd+++++vd +r
  MMETSP1325-20131115|2661_1   2 YRVVADHIRTLTFSISDGARPDNNGRGYVLRRILRRAVYFGsQFLGAKPGFFSKLVPAVVETYGDFFEEIVANQQVVMTVLAEEEAQFNKTIDKGLKVFKKKAAELKAdgMSVVPGKDCFFLSGSLGFPLDLTEIMAEQIGMTVDKEGYEEELENEAKKNTGKGGEDQkdmlfqSKETVWLGNESIATTNQQGKYQVGsTQEATIVAIFTgrgtlptEKGFQPSASAEDEvVGLVLDSTPFYPEAGGQVADTGSIASADgtKALAVSDVQVYAGYVLHIGTITSGSLAVGDTLTCSVDYER 302
                 9****************************************899***************************************************************99999**************************************99988777765555444434422111222222233344456566665446788999988622211114555555555444156********************99988756789**********************************875 PP

>> PF07973.9  Threonyl and Alanyl tRNA synthetase second additional domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   1.8e-13   8.2e-10       1      43 [.     410     468 ..     410     469 .. 0.96

  Alignments for each domain:
  == domain 1    score: 38.3 bits;  conditional E-value: 1.8e-13
                 EEEEEETT................TEEEE------SB-------EEEEEEES----EEE CS
   PF07973.9   1 vrvvsiGd................vsvelCgGtHvpnTgeIgafkilseesiakglrRI 43 
                 vr+vs+G                 +sve+CgGtHv+  g    f+i++e + a+g+rRI
  MMETSP1325-20131115|2661_1 410 VRIVSVGAdvqsllanptnaewanYSVEFCGGTHVEALGVGDVFVITEEVGTAAGVRRI 468
                 8******669999999******************************************9 PP

>> PF02272.14  DHHA1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.5   6.7e+03      12      32 ..     564     586 ..     559     590 .. 0.67
   2 !   20.9   0.3   4.2e-08   0.00019      20      67 ..     618     665 ..     607     666 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.5
                 --BEEEEE----S-HH...HHHH CS
  PF02272.14  12 gkikvsaRsskkldvr.g.ellr 32 
                 +++kv+aR   ++d +   +l +
  MMETSP1325-20131115|2661_1 564 DNAKVVARIDFGVDGKaSsKLFK 586
                 78899999877777663345555 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 4.2e-08
                 ----S-HH.HHHHH---TT--.------SEE---BSS---HHHHHHHHH CS
  PF02272.14  20 sskkldvrgellreaaeklgG.kGGGHadaAgasipdgnkleealeale 67 
                 ++++ld + +++++a e+ gG k GG+ + A +++   +k+++a++a++
  MMETSP1325-20131115|2661_1 618 VKDGLDAL-KWVQAAVEAAGGgKSGGREMNANGQVASLDKIQDAVDAAK 665
                 56788888.9***********************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (736 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       538  (0.0393505); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.15u 0.37s 00:00:01.52 Elapsed: 00:00:00.62
# Mc/sec: 2844.71
//
Query:       MMETSP1325-20131115|2662_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.38    9.6   8.4       0.56    9.1   5.8    1.1  1  PF06409.6 Nuclear pore complex interacting protein (NPIP)


Domain annotation for each model (and alignments):
>> PF06409.6  Nuclear pore complex interacting protein (NPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   5.8   4.1e-05      0.56     241     325 ..      39     130 ..      33     134 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 4.1e-05
   PF06409.6 241 nrmgrqpppptqqhsiidnslslktppeclltplppsalpsaddnlktpaecllrplppsvddn........lktpsecllaplppsappsvd 325
                 +r    pp p++  s  d +l lk  p   l   ppsa +   ++  t    +  p p ++           +k+ps  l  p pp +ppsv 
  MMETSP1325-20131115|2662_1  39 ERATSTPPTPSRTTSFPDAAL-LKGLPLLWLPCGPPSARAQERNQYATQLRTITAPAPRAALTTtssvslnpPKAPSSSLSEPPPPPSPPSVT 130
                 566678999********9998.8999978888899******999************999887666788888899999**************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 925.65
//
Query:       MMETSP1325-20131115|2664_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.067   13.2   0.0      0.074   13.0   0.0    1.1  1  PF00917.21 MATH domain


Domain annotation for each model (and alignments):
>> PF00917.21  MATH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.4e-06     0.074      22      50 ..      32      68 ..      15      76 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 5.4e-06
                ---EEEEEEE----........-EEEEEEEEE----T CS
  PF00917.21 22 fgipWrlriyrngg........tflglylhcekgend 50
                 gi Wr+++y++g          ++g++l++++++  
  MMETSP1325-20131115|2664_1 32 QGIRWRVKVYPQGSgvynhweeVQVGVFLELMPNKTA 68
                79************99999888789999999888655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|2665_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.9    7.8   4.3          2    7.7   3.0    1.2  1  PF09989.4  CoA enzyme activase uncharacterised domain (DUF2229)
        2.6    7.3   4.9        3.7    6.8   3.4    1.2  1  PF01988.14 VIT family
        7.8    5.1  17.7         11    4.6  12.2    1.2  1  PF07946.9  Protein of unknown function (DUF1682)
        7.9    4.5  13.5        8.7    4.3   9.3    1.1  1  PF05262.6  Borrelia P83/100 protein
        9.9    4.9  13.8        1.3    7.8   7.0    1.3  2  PF06098.6  Radial spoke protein 3


Domain annotation for each model (and alignments):
>> PF09989.4  CoA enzyme activase uncharacterised domain (DUF2229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.0   0.00072         2     110     180 ..      32     100 ..       4     114 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00072
   PF09989.4 110 keeeikllspelnlknkskealakrlvelgkklgiskeeikkAvekAleeqeefked.lkkkgeealellee 180
                 ++e i+ ++ +l+l+ +   +   ++ve++++ + +++e ++A +kA+e+ +++k++ lk+k+  a+++++e
  MMETSP1325-20131115|2665_1  32 ERESIEGQEAALDLDGP--VEGVGQVVEFMSSPRQKEKERREAEQKAFEAEKAAKREaLKQKAL-AKKKARE 100
                 45667777777888655..777889999999999*******************99974444443.3333333 PP

>> PF01988.14  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.4    0.0014       3.7      52     108 ..      57     107 ..      51     114 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0014
  PF01988.14  52 eylsvkaerdleeaelereqqeverspegeveeladilkakglseetaaqvaeelta 108
                 e++s+  ++++e++e e+      +  e+e++  ++ lk+k l++++a+++a++ +a
  MMETSP1325-20131115|2665_1  57 EFMSSPRQKEKERREAEQ------KAFEAEKAAKREALKQKALAKKKARELAKKQAA 107
                 677777788888777766......444455555555666666666666666665444 PP

>> PF07946.9  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  12.2     0.004        11     259     306 ..      64     111 ..      55     113 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.004
   PF07946.9 259 kvkklReevekkllkakeeerqEeaqekkeekkkeereaklaklsaee 306
                 + +k R e+e+k++ a++++++E++++k+ +kkk+++ ak+++  a+e
  MMETSP1325-20131115|2665_1  64 QKEKERREAEQKAFEAEKAAKREALKQKALAKKKARELAKKQAAEAKE 111
                 457888888999999999999999999999999999999888776665 PP

>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   9.3    0.0032       8.7     272     327 ..      33     110 ..       2     114 .. 0.37

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0032
   PF05262.6 272 dkkv............................aeekkreiekaqkeikkkdeeakkakdakaedlkkeskaeeke.aedkeleak 327
                  + +                            +e+++       +e+++k+ ea+ka  ++a + k  +k++ +e a+++ +eak
  MMETSP1325-20131115|2665_1  33 RESIegqeaaldldgpvegvgqvvefmssprqKEKER-------REAEQKAFEAEKAAKREALKQKALAKKKARElAKKQAAEAK 110
                 3333444444444444444443333332222123333.......44444444444444443222222233332220222222222 PP

>> PF06098.6  Radial spoke protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       1.2   3.4e+03      58      65 ..      25      32 ..       5      42 .. 0.46
   2 ?    7.8   7.0   0.00048       1.3     186     228 ..      63     105 ..      54     113 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 1.2
   PF06098.6 58 etpeeveg 65
                e     e+
  MMETSP1325-20131115|2665_1 25 ERTSSAEE 32
                22222223 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.00048
   PF06098.6 186 rqeEkerrkkqekerkekeketaeklaarafakkylsdlvkkv 228
                 rq+Ekerr+ ++k  + ++ +++e l+ +a+akk +++l kk 
  MMETSP1325-20131115|2665_1  63 RQKEKERREAEQKAFEAEKAAKREALKQKALAKKKARELAKKQ 105
                 89************************************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1509  (0.110372); expected 273.4 (0.02)
Passed bias filter:                      662  (0.0484201); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.43s 00:00:00.92 Elapsed: 00:00:00.55
# Mc/sec: 501.06
//
Query:       MMETSP1325-20131115|2666_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 989.04
//
Query:       MMETSP1325-20131115|2667_1  [L=300]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0035   16.7   0.5     0.0035   16.7   0.4    2.0  2  PF01956.11 Integral membrane protein DUF106
  ------ inclusion threshold ------
      0.013   15.1   2.1      0.043   13.4   0.9    1.9  2  PF01486.12 K-box region
      0.044   12.3   0.1       0.07   11.6   0.1    1.2  1  PF00474.12 Sodium:solute symporter family


Domain annotation for each model (and alignments):
>> PF01956.11  Integral membrane protein DUF106
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.12   5.7e+02      11      24 ..     115     128 ..      93     139 .. 0.64
   2 !   16.7   0.4   7.8e-07    0.0035      21      91 ..     195     266 ..     180     270 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.12
  PF01956.11  11 vllPivivvllvgi 24 
                 +++P++ +v++++ 
  MMETSP1325-20131115|2667_1 115 MVMPFIYMVVFIST 128
                 34455444444443 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 7.8e-07
  PF01956.11  21 lvgiltgllsellqkllidkkmekykkrekeiqkrarelqk.ngdklklkklekrkeelkedqkemmmeqmk 91 
                 ++g ++ +++ ++ +++i+k+me+++k++k+i   ++++++ +g  ++l++++k + el ++q++  m ++ 
  MMETSP1325-20131115|2667_1 195 MMGWIVVCYCYYVDQVVIEKNMEEAEKMSKRINGIQEQVRRlSGATSTLAAMNKDELELLAKQQKYAMTMTE 266
                 7899999*******************************9997777999******************999875 PP

>> PF01486.12  K-box region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.18   8.2e+02      59      75 ..      94     110 ..      93     114 .. 0.88
   2 ?   13.4   0.9   9.5e-06     0.043      15      58 ..     213     258 ..     207     267 .. 0.86

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.18
  PF01486.12  59 ekslkkiRskKnellle 75 
                 ++sl ++Rs K++ +le
  MMETSP1325-20131115|2667_1  94 DHSLARVRSWKTRGMLE 110
                 689*********99887 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 9.5e-06
  PF01486.12  15 eslqqelakLkkeienLqreqRhllGe..dLesLslkeLqqLeqqL 58 
                 e+  +e++k+ k+i+ +q++ R+l G    L  ++  eL+ L +q 
  MMETSP1325-20131115|2667_1 213 EKNMEEAEKMSKRINGIQEQVRRLSGAtsTLAAMNKDELELLAKQQ 258
                 56779*********************6337***********99985 PP

>> PF00474.12  Sodium:solute symporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.5e-05      0.07     156     253 ..      16     128 ..       9     149 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.5e-05
  PF00474.12 156 vgalilliivllevGgleslveklkeaapkvvdl..........ltpdslkllrdpltalslwlglvlGvagl.....philvRflaakdakailkgvlkltivlilvligmi 253
                 +g +  +i+  ++++++e ++ +++++a+++  +             ++++  r+p++   +    + G  g+      h l+R+ + k    + kg l+ ++++ +v++   
  MMETSP1325-20131115|2667_1  16 AGFSASPIYMAYAAASQEMFIAEYAHVANEGRRMlfilctlslvGAFETYRNARHPIQFGQPINMAGTGPKGVptsveDHSLARVRSWKTRGMLEKGALMVMPFIYMVVFIST 128
                 5666778888899999*************99666678877665312455666788888888877777888888999999**************************99988643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       858  (0.062756); expected 273.4 (0.02)
Passed bias filter:                      648  (0.0473961); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.42s 00:00:01.10 Elapsed: 00:00:00.59
# Mc/sec: 1218.49
//
Query:       MMETSP1325-20131115|2668_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|2671_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 555.75
//
Query:       MMETSP1325-20131115|2670_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-21   75.9   0.3      5e-21   75.2   0.2    1.3  1  PF00857.15 Isochorismatase family
     0.0045   16.5   0.0     0.0088   15.6   0.0    1.5  1  PF10167.4  Uncharacterised conserved protein


Domain annotation for each model (and alignments):
>> PF00857.15  Isochorismatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.2   7.3e-25     5e-21       1     173 [.      14     162 ..      14     163 .. 0.92

  Alignments for each domain:
  == domain 1    score: 75.2 bits;  conditional E-value: 7.3e-25
  PF00857.15   1 talvviDmqndflegvleseeieavvenikkllkaarkagipviftrdvheleeakgdlekkkasphfepgttgaelvdelaplegdvvvdKtrysafagtdldeiLkelgik.tlvlaGiatdvCVeatardaldlGyevvvvsDAvaalspelhdaalkrlkqafatvitte 173
                 ta+ ++D+q+ f    + ++ ++ vv+  k + +aa  ++ipv++t+++++                 + g+t ae+  +    eg +++ K+++s+  + ++ e +  lg +  +vl Gi+++vCV++t++d+l+ G+ev+v+ D+v++  + +++ al+r+++a+a ++t+e
  MMETSP1325-20131115|2670_1  14 TAFMLCDVQERFR---DLIHCMPLVVSTSKLMGDAAAVLDIPVVVTEQYPK-----------------IFGATMAEVGCA----EGTPTFAKRKFSMLTD-EVTEHMATLGERpSIVLYGIEAHVCVQQTCLDLLQQGMEVHVLVDGVSSQRTIDRSVALRRMEKAGAFMTTSE 162
                 7899*********...***********************************.................999999998766....599***********55.5555555555544*********************************************************998 PP

>> PF10167.4  Uncharacterised conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.3e-06    0.0088       8      90 ..      82     164 ..      78     190 .. 0.76

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.3e-06
   PF10167.4   8 kkvkkvseklsesikllaNePsvalyriQeHv..RrslPelvekkkevkeleeeiqgkiydleysikavksledadetfkniqel 90 
                  k+   +++++e +  l   Ps+ ly i  Hv   ++  +l+++ +ev+ l + +  +  +++ s+ a++ +e+a   ++  ++l
  MMETSP1325-20131115|2670_1  82 RKFSMLTDEVTEHMATLGERPSIVLYGIEAHVcvQQTCLDLLQQGMEVHVLVDGVSSQ-RTIDRSV-ALRRMEKAGAFMTTSESL 164
                 578889*************************733567778888888888777666543.5677776.467777777555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 992.78
//
Query:       MMETSP1325-20131115|2672_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-17   60.1   4.0    1.2e-06   27.8   0.1    3.1  3  PF13540.1  Regulator of chromosome condensation (RCC1) repeat
     0.0067   16.5   3.8        4.4    7.4   0.0    3.3  3  PF00415.13 Regulator of chromosome condensation (RCC1) repeat


Domain annotation for each model (and alignments):
>> PF13540.1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.1   1.8e-10   1.2e-06       8      30 .]       3      26 ..       3      26 .. 0.94
   2 !   25.4   0.0   9.6e-10   6.6e-06       2      25 ..      35      58 ..      34      61 .. 0.95
   3 !    7.5   0.1    0.0004       2.8       2      14 ..      73      85 ..      72      86 .] 0.88

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 1.8e-10
                ---EEEE-..---EEEE---TTST CS
   PF13540.1  8 gyHtcaLt.sdGaVlcWGsNssGQ 30
                ++H+c++t ++G+++cWG+N  GQ
  MMETSP1325-20131115|2672_1  3 ANHACGITlEEGDIVCWGDNRKGQ 26
                58****99889************9 PP

  == domain 2    score: 25.4 bits;  conditional E-value: 9.6e-10
                -EEE-----EEEE-.---EEEE-- CS
   PF13540.1  2 vsvsaGgyHtcaLtsdGaVlcWGs 25
                v+v aG++ tca+++dG + cWG+
  MMETSP1325-20131115|2672_1 35 VQVTAGNSATCAIRDDGHIECWGR 58
                89*********************6 PP

  == domain 3    score: 7.5 bits;  conditional E-value: 0.0004
                -EEE-----EEEE CS
   PF13540.1  2 vsvsaGgyHtcaL 14
                 +vs+G+ H c++
  MMETSP1325-20131115|2672_1 73 DQVSIGYAHVCGV 85
                59*********86 PP

>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.1    0.0033        23       2      14 ..      14      26 ..      13      26 .. 0.86
   2 !    7.4   0.0   0.00065       4.4      37      51 .]      33      47 ..      27      47 .. 0.87
   3 !    3.9   0.1     0.008        55      27      49 ..      59      83 ..      51      85 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0033
                TEEEEE------- CS
  PF00415.13  2 GrVysWGrndyGq 14
                G++ +WG n++Gq
  MMETSP1325-20131115|2672_1 14 GDIVCWGDNRKGQ 26
                77779*******9 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.00065
                ---EEE-----EEEE CS
  PF00415.13 37 rvvqvacGgsHtlal 51
                ++vqv++G+s t+a+
  MMETSP1325-20131115|2672_1 33 PFVQVTAGNSATCAI 47
                79***********97 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.008
                -EE-GGG--..----EEE-----EE CS
  PF00415.13 27 Pvkveglsg..vrvvqvacGgsHtl 49
                P+ +e  ++   ++ qv+ G+ H++
  MMETSP1325-20131115|2672_1 59 PQHLEDTRSqpHEWDQVSIGYAHVC 83
                777777777888999********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 412.17
//
Query:       MMETSP1325-20131115|2673_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 330.06
//
Query:       MMETSP1325-20131115|2669_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-63  210.8   0.5    7.6e-63  210.2   0.4    1.3  1  PF02882.14 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
    3.4e-31  107.5   0.4    5.3e-31  106.9   0.3    1.3  1  PF00763.18 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
  ------ inclusion threshold ------
      0.029   13.1   0.0      0.044   12.5   0.0    1.2  1  PF02401.13 LytB protein
      0.037   12.6   0.1      0.055   12.1   0.0    1.2  1  PF02423.10 Ornithine cyclodeaminase/mu-crystallin family


Domain annotation for each model (and alignments):
>> PF02882.14  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.2   0.4   2.2e-66   7.6e-63       1     157 [.      99     271 ..      99     275 .. 0.96

  Alignments for each domain:
  == domain 1    score: 210.2 bits;  conditional E-value: 2.2e-66
                 STTT---TTTT...--SS--HHHHHHHHHHHH--..--S-EEEEE---TT---HHHHHHHCTT-EEEEE-TT-ST---HHHHSSEEEE-------B-GGG-----EEEE---EEC...............TTEEE--B-HHHHHTTSSEE----------HHHHHHHHHHHHH CS
  PF02882.14   1 hpvnlgklvkg...eeallpctpkgivellketgielegkkvvvvGrsnivgkplallLleknatVtvchsktkdlaeilreaDivvvavGkpelvkaemvkegavviDvGinrv.............kekgklvGDvdfeevkevasaitPvpgGVGpmTvamllkntleaa 157
                 h +n+g++++     +  ++ctp+g++ell++++i+++gk++vv+Grsnivg+p+ +lL++ n tVt+chs+tkd ae++r+aDi+++avG +e v+++++k+gavviDvGinrv              +++ + GDv+f+e++ ++s+itPvpgGVGpmT+aml knt++ a
  MMETSP1325-20131115|2669_1  99 HALNVGNMWLSggdPPLAVACTPAGCIELLQRYDIKVSGKNCVVLGRSNIVGMPVCALLQSMNGTVTCCHSRTKDTAEKCRKADIIIAAVGIAEYVRGDWIKPGAVVIDVGINRVknndpsiktktgeMKEYVMKGDVNFDECAPKCSYITPVPGGVGPMTIAMLCKNTYNLA 271
                 679****9998776779**********************************************************************************************************998876777899**********************************9987 PP

>> PF00763.18  Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.9   0.3   1.5e-34   5.3e-31      25     117 .]       3      96 ..       1      96 [. 0.97

  Alignments for each domain:
  == domain 1    score: 106.9 bits;  conditional E-value: 1.5e-34
  PF00763.18  25 ek.gvkpkLavilvgddpaskvYvrskekaaeelGieseliklpediteeellaeieklnedssvhGilvqlPlpkhldeekileaidpeKDvD 117
                 ++ +  p+Lav+lvg +++s  Yvr+k+k+ +e+G++s  ++lp++i++eel+ae++kln d+ +hGilvqlPlp ++d++++l++i++eKD D
  MMETSP1325-20131115|2669_1   3 AShNCVPGLAVVLVGTKSDSMQYVRMKKKKVAEIGFHSVDVNLPDTISQEELIAEVQKLNMDPMIHGILVQLPLPVGIDSNEVLKSISVEKDAD 96 
                 455899**************************************************************************************98 PP

>> PF02401.13  LytB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.3e-05     0.044      63     133 ..     179     249 ..     155     275 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.3e-05
                 ---EEEE------HHHHHHHHHSS-EEEE---HHHHHHHHHHHHHHH---EEEEE-----TTT-------- CS
  PF02401.13  63 kgavvilsahGvspevreeleerglkvvDaTCPlVtkvhneveklakkgyeviliGkknHeEvigtlgvas 133
                 ++a +i+ a G+++ vr +  + g+ v+D    +V++   ++++ + + +e ++ G+ n +E     ++++
  MMETSP1325-20131115|2669_1 179 RKADIIIAAVGIAEYVRGDWIKPGAVVIDVGINRVKNNDPSIKTKTGEMKEYVMKGDVNFDECAPKCSYIT 249
                 678899********************************************************988777765 PP

>> PF02423.10  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.6e-05     0.055     183     229 ..     170     213 ..     154     221 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.6e-05
                 EEE-THHHHTSSSEEEE----SS..-SB-CCC-----EEEE------ CS
  PF02423.10 183 avksaeeavegadivvTvTaakeaapilkaewvkpGahinavgadrp 229
                   k+++e  ++adi++++    e   ++  +w+kpGa +  vg +r 
  MMETSP1325-20131115|2669_1 170 RTKDTAEKCRKADIIIAAVGIAE---YVRGDWIKPGAVVIDVGINRV 213
                 568999************99988...9*************9997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1354.86
//
Query:       MMETSP1325-20131115|2676_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|2675_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       645  (0.0471767); expected 273.4 (0.02)
Passed bias filter:                      444  (0.0324751); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.42s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 861.85
//
Query:       MMETSP1325-20131115|2677_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-12   43.9   0.2     0.0024   17.6   0.0    3.9  4  PF13516.1  Leucine Rich repeat
    9.2e-09   34.6   0.1     0.0007   19.0   0.0    2.3  3  PF12799.2  Leucine Rich repeats (2 copies)
    0.00031   20.3   0.0    0.00064   19.3   0.0    1.5  1  PF13855.1  Leucine rich repeat
     0.0011   18.5   0.0     0.0011   18.5   0.0    1.1  1  PF13306.1  Leucine rich repeats (6 copies)
  ------ inclusion threshold ------
      0.066   13.1   0.0         19    5.6   0.0    2.8  3  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.31   8.5e+02      13      22 ..       2      11 ..       2      13 .. 0.86
   2 !   14.4   0.0   9.3e-06     0.025       3      22 ..      17      36 ..      14      38 .. 0.93
   3 !   17.6   0.0   8.6e-07    0.0024       1      23 [.      40      62 ..      40      63 .. 0.97
   4 !    6.4   0.1    0.0038        10       1      10 [.      65      74 ..      65      75 .] 0.93

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.31
   PF13516.1 13 qigdeGlsaL 22
                q++d G++a+
  MMETSP1325-20131115|2677_1  2 QVTDVGVQAI 11
                689****998 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 9.3e-06
   PF13516.1  3 nLtsLdLsnNqigdeGlsaL 22
                +Lt+++L ++q++d G++a+
  MMETSP1325-20131115|2677_1 17 KLTEINLESTQVTDAGVQAI 36
                599***************98 PP

  == domain 3    score: 17.6 bits;  conditional E-value: 8.6e-07
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaLa 23
                +++Lt+++L ++ ++d G++a+a
  MMETSP1325-20131115|2677_1 40 CSKLTEINLESTRVTDVGAQAIA 62
                99********************8 PP

  == domain 4    score: 6.4 bits;  conditional E-value: 0.0038
   PF13516.1  1 lknLtsLdLs 10
                +++Lt+L+L+
  MMETSP1325-20131115|2677_1 65 CSKLTWLNLG 74
                99******97 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0   0.00081       2.2      22      38 ..      14      30 ..       2      41 .. 0.81
   2 !   19.0   0.0   2.6e-07    0.0007       2      39 ..      17      56 ..      16      63 .. 0.88
   3 !   14.6   0.0   5.9e-06     0.016       2      32 ..      42      74 ..      41      75 .] 0.91

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00081
   PF12799.2 22 nLpnLktLnLsnNpisd 38
                ++ +L+++nL++++++d
  MMETSP1325-20131115|2677_1 14 SWLKLTEINLESTQVTD 30
                55699*********998 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 2.6e-07
   PF12799.2  2 nLevLdLsnNnIkd..lppel.anLpnLktLnLsnNpisdl 39
                +L++++L +++++d  + + + a++++L+++nL++++++d+
  MMETSP1325-20131115|2677_1 17 KLTEINLESTQVTDagVQA-ItASCSKLTEINLESTRVTDV 56
                79***********944555.999****************96 PP

  == domain 3    score: 14.6 bits;  conditional E-value: 5.9e-06
   PF12799.2  2 nLevLdLsnNnIkdlppe.l.anLpnLktLnLs 32
                +L++++L +++++d++++ + a++++L+ LnL 
  MMETSP1325-20131115|2677_1 42 KLTEINLESTRVTDVGAQaIaASCSKLTWLNLG 74
                8***************977758*********95 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.4e-07   0.00064       3      56 ..      18      73 ..      17      75 .] 0.86

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 2.4e-07
   PF13855.1  3 LkeLdLsnNrlkvipd.gaFkglsnLkvLdLsgnnlksispea.fkgLpsLreLnL 56
                L+e++L ++  ++ +   +  ++s+L++++L +++ + + ++a  +++ +L++LnL
  MMETSP1325-20131115|2677_1 18 LTEINLESTQVTDAGVqAITASCSKLTEINLESTRVTDVGAQAiAASCSKLTWLNL 73
                8889999998998866367779*****************9986589*********9 PP

>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   4.1e-07    0.0011      58     109 ..      16      72 ..       1      75 [] 0.66

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 4.1e-07
   PF13306.1  58 ssltsitips.sltsigenaF.sncsslksinipss.lttigssaFsn.c.slksit 109
                  +lt+i+++s ++t  g +a  ++cs+l++in++s+ +t +g +a +  c +l+ ++
  MMETSP1325-20131115|2677_1  16 LKLTEINLEStQVTDAGVQAItASCSKLTEINLESTrVTDVGAQAIAAsCsKLTWLN 72 
                 467888887657777775554156888888888765588888888755466777665 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0077        21       1      21 [.      17      42 ..      17      43 .. 0.80
   2 ?    5.6   0.0    0.0071        19       1      15 [.      42      61 ..      42      68 .. 0.74
   3 ?   -0.1   0.0      0.55   1.5e+03       1       8 [.      67      74 ..      67      75 .] 0.84

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0077
                TESEEEETSSBCBC.....HHHHHHH CS
  PF00560.28  1 nLeeLdLsgNnlts.....lppslsn 21
                +L+e++L ++++t+     +  s+s+
  MMETSP1325-20131115|2677_1 17 KLTEINLESTQVTDagvqaITASCSK 42
                69**********98787777776665 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0071
                TESEEEETSSBCBC.....H CS
  PF00560.28  1 nLeeLdLsgNnlts.....l 15
                +L+e++L ++++t+     +
  MMETSP1325-20131115|2677_1 42 KLTEINLESTRVTDvgaqaI 61
                69**********98455554 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.55
                TESEEEET CS
  PF00560.28  1 nLeeLdLs 8 
                +L+ L+L 
  MMETSP1325-20131115|2677_1 67 KLTWLNLG 74
                6999**95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 382.40
//
Query:       MMETSP1325-20131115|2678_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|2674_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   10.7   0.1       0.18   10.3   0.1    1.3  1  PF04285.7 Protein of unknown function (DUF444)


Domain annotation for each model (and alignments):
>> PF04285.7  Protein of unknown function (DUF444)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   1.3e-05      0.18      69     123 ..      71     124 ..      48     183 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 1.3e-05
   PF04285.7  69 ggkrkevgeGddesakgdvierdqegggegkgkgkaagdqegeddfefevsreev 123
                  + r     G d  ++g+ ++++q+ ++  +g+g+++g ++g d f ++ ++   
  MMETSP1325-20131115|2674_1  71 MNARAASDAGMDGGKAGQGYQQPQSHNA-WQGQGQGQGMGKGRDIFTTKPTIRHT 124
                 4555566678899999************.88999999999******998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.47s 00:00:00.90 Elapsed: 00:00:00.64
# Mc/sec: 906.12
//
Query:       MMETSP1325-20131115|2679_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.0   0.4      0.021   14.5   0.3    1.4  1  PF04043.10 Plant invertase/pectin methylesterase inhibitor
      0.068   11.5   0.4      0.077   11.3   0.3    1.2  1  PF07909.6  Protein of unknown function (DUF1663)


Domain annotation for each model (and alignments):
>> PF04043.10  Plant invertase/pectin methylesterase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.3   3.1e-06     0.021      65      96 ..     113     153 ..      59     173 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.1e-06
                 ..........--THHHHHHHHHHHHHHHHH---HHHHHHHH CS
  PF04043.10  65 a.........akdprakaaledClelyddavddLsralaal 96 
                           a d +++  l+ Cl  y+ av+d++ra+++ 
  MMETSP1325-20131115|2679_1 113 EnlaytlaarAPDDEQEHELDACLAEYKNAVADMKRAMRQA 153
                 13444444449999999*********************986 PP

>> PF07909.6  Protein of unknown function (DUF1663)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   1.1e-05     0.077      29      83 ..      53     106 ..      34     151 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.1e-05
   PF07909.6  29 reaeharsgreileaaraaaededs.sltspissyavnlGfspqpdvalnathekd 83 
                     hars+r + e + aaa+d +  s + p+ s avn G++ q   a +  hek 
  MMETSP1325-20131115|2679_1  53 LSQAHARSAR-LSEVGSAAAVDGQRlSYADPVES-AVNRGMASQASAASTILHEKL 106
                 5567****98.6799******9864388889987.9******************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 886.20
//
Query:       MMETSP1325-20131115|2681_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-17   62.4   0.1    5.6e-17   62.0   0.0    1.2  1  PF00106.20 short chain dehydrogenase
    1.4e-06   28.1   0.0    1.8e-06   27.8   0.0    1.0  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase
  ------ inclusion threshold ------
       0.01   15.3   0.0      0.013   15.0   0.0    1.2  1  PF08659.5  KR domain


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.0   1.2e-20   5.6e-17      75     166 ..       6     103 ..       1     104 [. 0.92

  Alignments for each domain:
  == domain 1    score: 62.0 bits;  conditional E-value: 1.2e-20
                 HHH----SEEEEE---TT..-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH....HH---EEEEEECHHHHSSTT.HHHHHHHCHHHCCHHHHHHHH CS
  PF00106.20  75 rkalgpldgvvhnagvld..dgpleeltperlervlapkvtgawllheltld....adlgafvlfSSvagvlgspgqaaYaaakaaldalaesrraeg 166
                   +++ +d++v+nag++    g +++++ e++e++l+++ +g +++++++l+    +  g +v++ Svag +  p   +Y+a+ka++++l+ ++ra++
  MMETSP1325-20131115|2681_1   6 SGEWADVDVLVNNAGLALsgPGKIHDQDIEDWETMLDVNCKGLLYVTKAVLPgmveRANGHVVNIGSVAGNYALPMNNVYCASKAFVNHLSLAMRADL 103
                 557889*********95546999******************************99877*************************************986 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   3.9e-10   1.8e-06      71     221 ..       9     158 ..       3     166 .. 0.89

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 3.9e-10
                 ---BSEEEEEEE---T..TTS-GGG------HHHHHHHTHHHHHHHHHHGG..GB-----EEEEEE-------------------THHHHHHH.HHH----S---EEEEEE-------..-------------------------CCC---HHH CS
   PF13561.1  71 ggkiDilvhsianspeervekplletsrkgllaalsisayslvsllkaalpknlmneggSivalsylaservipgyggmsvaKAaLEsltRvl.AvelgrkkgiRvntisaGplktra..akaiggiekmieyseenapLgkelsaeevaeaaa 221
                 + ++D+lv+ ++ + +     ++++ + ++ ++ l++++  l+ ++ka+lp ++   +g +v +  +a + + p  + + ++KA + +l   + A  +g   g+Rv  i  G ++t     k  g+  k+ +++e+ +  +  ++ +++ae + 
  MMETSP1325-20131115|2681_1   9 WADVDVLVNNAGLALS--GPGKIHDQDIEDWETMLDVNCKGLLYVTKAVLPGMVERANGHVVNIGSVAGNYALPMNNVYCASKAFVNHLSLAMrADLYGT--GVRVTSIEPGNTETEFsiVKFGGDKAKADKVYEAATGPRVAMTGDDIAEIIH 158
                 5789******999999..889999***************************9999**********************************99997888887..************9754225555557889999999999888899999998765 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   2.9e-06     0.013      84     166 ..      14     102 ..       1     119 [. 0.80

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.9e-06
                 EEEE------..---TTT--HHHHHHHHHHHHHHHHHHHHHHCC....----EEEEEEEGGGT-------------HHHHHH------- CS
   PF08659.5  84 GvvhaAgvlr..dallaemtaedlaavlapKvtGawnLhellad....epldffvlfSSiagvlgsagqanyaaanaflDalaehrraq 166
                   v+ Ag      + + +++ ed++++l   ++G + + +++      +   ++v + S+ag +  +    y+a++af++ l  ++ra 
  MMETSP1325-20131115|2681_1  14 VLVNNAGLALsgPGKIHDQDIEDWETMLDVNCKGLLYVTKAVLPgmveRANGHVVNIGSVAGNYALPMNNVYCASKAFVNHLSLAMRAD 102
                 556666654412568999**********************9998777777889****************************99888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 731.30
//
Query:       MMETSP1325-20131115|2683_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-14   54.3   0.0    1.3e-14   54.0   0.0    1.1  1  PF08212.7 Lipocalin-like domain


Domain annotation for each model (and alignments):
>> PF08212.7  Lipocalin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.0   9.7e-19   1.3e-14      44     142 ..      26     125 ..       5     126 .. 0.88

  Alignments for each domain:
  == domain 1    score: 54.0 bits;  conditional E-value: 9.7e-19
   PF08212.7  44 rcrkvdgklkeiegkAkvedpaseaklkVsFlkefl....vvkgdYwvleldddyslalvgspdrkylwilsRtpqlseeqleqllekareqGydvskLirva 142
                 +     g  k+i  +A+++++ ++ ++ + F    l    +    Y +l++++dys+a+vg pdr+y+wi+ R+p+++ e ++      r+  ydvs++  v+
  MMETSP1325-20131115|2683_1  26 TG---TGGAKTIVQRASIVNSPTSTHWSMDFRLSALgvfvPLGVSYLILHVAEDYSYAVVGVPDRSYAWIMGRQPAMEGEVMNLCKDVLRRCAYDVSEVVAVE 125
                 33...46689999******************997778888999******************************************************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 942.91
//
Query:       MMETSP1325-20131115|2686_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-40  137.9   0.0    3.2e-40  137.7   0.0    1.0  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.7   0.0   2.4e-44   3.2e-40       1     143 [.      21     171 ..      21     178 .. 0.85

  Alignments for each domain:
  == domain 1    score: 137.7 bits;  conditional E-value: 2.4e-44
  PF00160.16   1 lvdietss..kGrivieLfedkaPktvenFlklakeg.........fYdgtkfhrvikgfmiqgGdpsgkgangeekkaggesipdEikkkklkh.krGalamartgpepnsngsqFfItlgdaphlDgkytvFGkVv..egmdvvekieavetdek 143
                 ++d+++++  +Gri++eLf+d++P+t+enF+++++ g          Y++++fhr+ik+fmiqgGd+ +++ +g+     ge ++dE+  + l+h  +G+l+ma++g  pn+ng+qFf+t +++++lDgk++vFGkV     + v++k e+v+++ k
  MMETSP1325-20131115|2686_1  21 FFDMTIGGvpAGRIKMELFADECPRTAENFRQFCT-GearrsnhpvGYKDSPFHRIIKEFMIQGGDFLKQDGTGRM-SIYGERFDDEN--FNLRHsAPGLLSMANSG--PNTNGCQFFLTCAKCEWLDGKHVVFGKVLdpASLMVLRKCENVQVEPK 171
                 58999988999***********************7.3366777888********************9988764443.4444469****..46777688*******98..7****************************777899******9877642 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 841.07
//
Query:       MMETSP1325-20131115|2685_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-11   43.2   3.7    2.5e-11   43.2   2.6    2.2  2  PF02020.13 eIF4-gamma/eIF5/eIF2-epsilon
  ------ inclusion threshold ------
      0.027   14.0  21.7      0.047   13.2  15.0    1.4  1  PF10721.4  Protein of unknown function (DUF2514)
       0.18   11.1  11.3      0.036   13.4   4.3    2.0  2  PF14153.1  Spore coat protein CotO
        2.3    7.2  11.4          4    6.4   7.9    1.3  1  PF04641.7  Replication termination factor 2
        2.7    7.8  27.1       0.11   12.3  13.1    2.2  2  PF14265.1  Domain of unknown function (DUF4355)
        2.7    5.4   4.1        2.8    5.4   2.9    1.1  1  PF05758.7  Ycf1
        4.4    5.7  17.2        6.9    5.1  11.9    1.2  1  PF12569.3  NMDA receptor-regulated protein 1


Domain annotation for each model (and alignments):
>> PF02020.13  eIF4-gamma/eIF5/eIF2-epsilon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   2.1       3.8   7.4e+03      59      62 ..      55      58 ..      35      82 .. 0.55
   2 !   43.2   2.6   1.3e-14   2.5e-11       2      84 .]     160     247 ..     159     248 .. 0.78

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 3.8
  PF02020.13 59 skkv 62
                ++k 
  MMETSP1325-20131115|2685_1 55 EAKA 58
                2222 PP

  == domain 2    score: 43.2 bits;  conditional E-value: 1.3e-14
  PF02020.13   2 kaqvellgalerlcke......neellkllakilklLYdaDiieEeailkWaek.skkyvakegskkvrkqakpfveWLeeaeeEseeee 84 
                 k+q e+l+a +  +        +e+ ++ ++k+l +LY+aD++e++ + +W ++  +++ +++ ++  + q ++f+eWL+e +eE+ee+e
  MMETSP1325-20131115|2685_1 160 KKQAEILYACQVHYDGlgfpkeEETKKSFFQKMLFALYNADVVEDDGFDEWRNAdDDEHIPGKMTA--LVQSNQFFEWLDEPSEEEEEDE 247
                 678888888888854356665355556778************************555544555555..5999*********999998886 PP

>> PF10721.4  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2  15.0   2.4e-05     0.047      22     112 ..      23     109 ..      12     147 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.4e-05
   PF10721.4  22 GrsaedaawaqkwaerdaadaqaevaaetaaRaeeqrRqaaaeeaakdAqeeaaaaradAadAea.aadrLrqeadklaaaksavtsdtaaa 112
                 G + + +++ ++ a+++aa    e +a++a  + e++ +aa+  ++k+A+eeaaaa+a+A++A+a aa  L+ eadkl aa + v  d+ aa
  MMETSP1325-20131115|2685_1  23 GMRSAPRKSPEEIAAEKAA----EEEAKAAKKKAEEEAKAAKAAEKKKAEEEAAAAKAAADAAQAeAAAALKVEADKLIAAGK-VGDDLVAA 109
                 4444444444555555554....4444444445555555556666899*****99999999999834578********44444.56666555 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   4.3   1.9e-05     0.036      56     130 ..      33     187 ..      11     194 .. 0.47
   2 ?    0.4   0.1      0.18   3.4e+02      91     103 ..     240     252 ..     216     262 .. 0.60

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.9e-05
   PF14153.1  56 eqkeekaeveseeeaeeaesedeqesseqeeiaqeveeeeeeeeekqeevekekeaekeeteleeek....................................................................................qkkerkKs 130
                 e+ ++++++e+e +a++ + e+e+++++ +e ++ +ee+ ++++ +   +    +++++  ++e++k                                                                                    +++e+kKs
  MMETSP1325-20131115|2685_1  33 EEIAAEKAAEEEAKAAKKKAEEEAKAAKAAEKKKAEEEAAAAKAAADAAQ----AEAAAALKVEADKliaagkvgddlvaavpdalkveggvravvdavlaaleeatsrdwctkgqyaealiamckgkggkkkqaeilyacqvhydglgfpKEEETKKS 187
                 22222222222222223233333333333332322222211111111111....111111222222244445666666666666666666666666666666666666666666666666666666666666666666666666666666555555555 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.18
   PF14153.1  91 veeeeeeeeekqe 103
                  eeeee+ee+++e
  MMETSP1325-20131115|2685_1 240 SEEEEEDEESDEE 252
                 2222222222222 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   7.9    0.0021         4     183     234 ..      33      83 ..      16     108 .. 0.44

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0021
   PF04641.7 183 eeekakkkkkkkkkkkkkaeakgekaeaeaksksskeesskagkkkekkklk 234
                 ee +a+k ++ ++k+ kk++++++ka+++a++k+++ee+ +a k+ ++ +++
  MMETSP1325-20131115|2685_1  33 EEIAAEKAAEEEAKAAKKKAEEEAKAAKAAEKKKAEEEA-AAAKAAADAAQA 83 
                 333333333333333333333333333333333222221.111111111111 PP

>> PF14265.1  Domain of unknown function (DUF4355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  13.1   5.5e-05      0.11      16      91 ..      35     110 ..      22     137 .. 0.66
   2 ?    0.2   0.7      0.32   6.2e+02      36      55 ..     234     253 ..     181     255 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.5e-05
   PF14265.1  16 aiakekakwekeqqekkeeaeklakmsaeekaekeleklkkeleelkaelarrelkaeakkqlsekgLptefldlv 91 
                 + a++ a++e+++++kk e e++a   ae+k+++e+ +  k+ +++ +++a ++lk ea k +++ ++  ++++ v
  MMETSP1325-20131115|2685_1  35 IAAEKAAEEEAKAAKKKAEEEAKAAKAAEKKKAEEEAAAAKAAADAAQAEAAAALKVEADKLIAAGKVGDDLVAAV 110
                 333333444444444455666666566666666666666777777777788899*****99999999888877766 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.32
   PF14265.1  36 eklakmsaeekaekeleklk 55 
                 e l++ s+ee++++e +++k
  MMETSP1325-20131115|2685_1 234 EWLDEPSEEEEEDEESDEEK 253
                 34444445555444444444 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   2.9    0.0015       2.8     228     290 ..      33     159 ..      20     253 .. 0.58

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0015
   PF05758.7 228 elseieerseeekk.keieaesekkrakqeqeeeeeedsslaseekedkdkideqeekkveek................................................................k 290
                 e   +e+  eee k ++++ae+e+k ak  +++++ee+   a + + d+ + ++    kve +                                                                k
  MMETSP1325-20131115|2685_1  33 EEIAAEKAAEEEAKaAKKKAEEEAKAAKAAEKKKAEEE-AAAAKAAADAAQAEAAAALKVEADkliaagkvgddlvaavpdalkveggvravvdavlaaleeatsrdwctkgqyaealiamckgkggK 159
                 33334444333333033333333333333333333333.33334444444444443333333334444445556666666666666666666666666665555555555555555555555555442 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  11.9    0.0035       6.9     401     467 ..      32      96 ..      21     115 .. 0.46

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0035
   PF12569.3 401 eeaanaelsaaerkklrkkakkaekkaekeeaekaekeeekkaaekkakkedeetkkkdpdplgekL 467
                  e+  ae +a+e+ k++kk+ ++e+ka+k++++k+++ee+++  +k+a ++ +++ +++   +++kL
  MMETSP1325-20131115|2685_1  32 PEEIAAEKAAEEEAKAAKKKAEEEAKAAKAAEKKKAEEEAAA--AKAAADAAQAEAAAALKVEADKL 96 
                 233334444444455555555555555555555444444422..22222222333333333334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1836  (0.134289); expected 273.4 (0.02)
Passed bias filter:                      792  (0.0579286); expected 273.4 (0.02)
Passed Vit filter:                       163  (0.0119222); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.94u 0.43s 00:00:01.37 Elapsed: 00:00:00.67
# Mc/sec: 1051.54
//
Query:       MMETSP1325-20131115|2684_1  [L=345]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-93  314.0   0.6    1.6e-93  313.8   0.4    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  313.8   0.4   1.2e-97   1.6e-93     476     758 ..       2     336 ..       1     337 [. 0.94

  Alignments for each domain:
  == domain 1    score: 313.8 bits;  conditional E-value: 1.2e-97
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......................................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.............XXXXXXXXXXXXXXXXXXXX..XXXX.XXXXXXXXXXXXXXXSSSTTTCCHHHHHHHHCHCCHHHHHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14 476 piwnlaenkLlflnsfkmklsvilGvihmtfglllsffnhvkekskldildafipqlifllsilgYlviliiykwlvdwake......................................skeapslliglinmflfpgtldsqlYpgQakvqviLvvlalvcvpillllkplflkregkkks.............ekedlenqdeeevesdaeee..eeefefgevmihqvihtiefllgcvshtaSYlRLwALsLAhaqlssvlwtmvirlafeskslvialvvvfaivfvltvvilvlmeglsAflhaLRLhwVEffskFyeGeGykFePFsf 758
                 p+w++ +n+Llf ns+kmk svi+Gvi+m +g++l  +n +++++ ld + +f+p ++f  +++gY++++i+ kw++dw ++                                        ++p l+ +lin  l+pg++d+ lY gQa+vq+i++++a  +vp+ll++kp++l+r+ ++k+              +++ ++  ee+ ++da+    +ee +f e++ihq+i+tief+lg+vs+taSYlRLwALsLAh++l+ v+w+ ++    e+++ +++++v  a+++ +t ++l+ m  l  flhaLRLhwVEf++kFy+ +GykF+PF+ 
  MMETSP1325-20131115|2684_1   2 PAWHISDNELLFFNSMKMKSSVIIGVIQMCVGICLRGMNSIYFGEWLDFYFEFLPMVVFAFGLFGYMIVVIFVKWSIDWQHRmylgtcnednkhwpecnenpgdyeladlcpldyggsgdGCQPPNLITTLINIALAPGSVDEPLYAGQATVQTIILLAAFGAVPVLLIGKPYMLSRQMNQKHtsdsrtaltaggdFGDEYHKGLEEDMHGDAHGDgdHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHSELATVFWEKAMLSTIEMGN-PVFIFVGYAVFAAVTFAVLLCMDVLECFLHALRLHWVEFQNKFYKADGYKFQPFAL 336
                 79*********************************************************************************************************************8888999999*************************************************999889999999997776333344444444444555447899******************************************************9***9.89****************************************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 1653.49
//
Query:       MMETSP1325-20131115|2688_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.53   10.2   3.9        0.2   11.6   0.3    1.9  2  PF11188.3 Protein of unknown function (DUF2975)


Domain annotation for each model (and alignments):
>> PF11188.3  Protein of unknown function (DUF2975)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.13   1.8e+03      10      38 ..     110     138 ..     102     152 .. 0.49
   2 ?   11.6   0.3   1.4e-05       0.2      22      82 ..     166     222 ..     158     227 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.13
   PF11188.3  10 vFseenarllkriGllllawallsplyet 38 
                 ++  e  ++++r+ l++++++   +  +t
  MMETSP1325-20131115|2688_1 110 YWGMEIYTMVRRLLLTCAVLMCGTLAATT 138
                 55555555555555544444443333333 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 1.4e-05
   PF11188.3  22 iGllllawallsplyetllslaLsldnppgqrvlsvslgsadlvlllvgllilviawvmre 82 
                 +  +++ + ll +ly+    l+L  + + gq ++ +s+  ++   +++++++lv ++ ++e
  MMETSP1325-20131115|2688_1 166 FTRVCCWQILLFVLYQ----LLLDSEMTTGQQAVHISVLLMSTNVMMAAFIFLVHGKALKE 222
                 5555666666666666....77778888999**************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       700  (0.0511995); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.41s 00:00:01.04 Elapsed: 00:00:00.52
# Mc/sec: 1400.95
//
Query:       MMETSP1325-20131115|2690_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|2691_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-23   82.1   0.0    4.5e-23   81.9   0.0    1.0  1  PF01451.16 Low molecular weight phosphotyrosine protein phosphatase


Domain annotation for each model (and alignments):
>> PF01451.16  Low molecular weight phosphotyrosine protein phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.9   0.0   3.3e-27   4.5e-23       1     135 [.      18     148 ..      18     149 .] 0.88

  Alignments for each domain:
  == domain 1    score: 81.9 bits;  conditional E-value: 3.3e-27
                 EEEEESSSTSHHHHHHHHHHHHHHHTHGCCEEEEEEEETST.TSS-THHHHHHHHHTTS-GTTS--SBGGHHHHHCSSEEEESSHHHHHHHHHHHCTEEEGCEEECCCEEE---GC...SSHHHHHHHHHHHHHHHHH CS
  PF01451.16   1 vlfvCtgNicRSpmAeallrallekalgdkvevdSAGtealvgesvdpravevlkekgidisghrarqlseeelkefDliltldeeaarelcpvapekkeakvvllgeqwdipDPy...gkeeeefeevrdeieervk 135
                 v+f+C +N+cRS+mA+a+lr++  ++ + +v v SAG+    g+ v++ a+ v++e g+dis+ +++ + +++ ++f  ++  ++   +     a+ k+    + l e+w+++DP     ++ +e+++vrdei+  v+
  MMETSP1325-20131115|2691_1  18 VMFLCNHNSCRSQMADAWLRTISAQR-EVEVGVASAGIV--GGTAVKEGAITVMAEVGVDISAYTSDAMADFNPERFQAVISCCGCGDKLDGDKAVWKS----RALFEDWNLDDPPaidPGDLSEYRRVRDEIKAKVE 148
                 89********************8887.999*********..9*****************************************8776654444444433....46889*******9666677***********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 743.87
//
Query:       MMETSP1325-20131115|2687_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-13   49.2   0.0    6.1e-13   48.7   0.0    1.1  1  PF13383.1 Methyltransferase domain
     0.0062   16.4   0.0     0.0095   15.8   0.0    1.4  1  PF05050.7 Methyltransferase FkbM domain


Domain annotation for each model (and alignments):
>> PF13383.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.0   8.9e-17   6.1e-13      70     227 ..     193     371 ..     184     380 .. 0.80

  Alignments for each domain:
  == domain 1    score: 48.7 bits;  conditional E-value: 8.9e-17
   PF13383.1  70 pkwvCdPnrlrk..keedclvySvGSngdfefEegliklvgsaceiHvFD...fgaaarkeskepkrihyhqlglgsaeekavepdllksladivkaLghkgrtidvlkiDcegcEwstykdWldadv......rqilveiha..........apsreav.........akdffdaleee.efllfhke 227
                 +k  C   +l+     ++c + S+GSn+++ fE ++ ++++  c + + D    g+  + +++   r+  ++++lgs  + +++   +ks +++ k L+  +  +  lk+DcegcE + +   ++a        +qi +e+h           +               a++f+++l++  +++l h+ 
  MMETSP1325-20131115|2687_1 193 AKHFCAASKLMVgsSSRPCHIISIGSNNQWGFETSIFRQTN--CTVDTLDctgEGKRWKPPAEISSRVRLRNICLGSGAKGEQTR--YKSWTEMTKILNLTTAPV-WLKMDCEGCELTVLPALVKAARegsllpDQISLEVHFgtgssapqvkE-----GagqltpietASRFYKELYSYgGYVLIHRL 371
                 678888888887667899*********************99..*******73334444455566789**********99999888..9**********9876665.59**************999887788999********866666444440.....255666666699***999875256666665 PP

>> PF05050.7  Methyltransferase FkbM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.4e-06    0.0095      89     144 ..     277     331 ..     193     352 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.4e-06
   PF05050.7  89 tievpvvtLDdfleenisridllKiDvEGaElevL....egaeetlkrcqpnii.vEvhef 144
                 + + +++ + ++     + +  lK+D+EG El vL    + a+e      p  i +Evh+ 
  MMETSP1325-20131115|2687_1 277 KSWTEMTKILNL----TTAPVWLKMDCEGCELTVLpalvKAAREGSLL--PDQIsLEVHFG 331
                 555555555444....234779*************9988444444422..55577898774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 1634.66
//
Query:       MMETSP1325-20131115|2692_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.5    8.0  33.2        1.6    7.8  23.0    1.2  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  23.0   0.00012       1.6     198     337 ..      11     150 ..       1     216 [. 0.65

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00012
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........................................................XXXXXXXXXXXHHHHHH...... CS
  PF04652.11 198 eesseslpsdplsaedsdssapgldadeasaspseapssspgvpsfpspdeseasnkdsqlPsaPtyaqknssssqsvfPpsseeeetssssppsteapssppvqaps....apakpslssakPtaqsassaqaqplqsvapqi 337
                  +++ + ++  ++++ ++++ap     +a +++ +a   +p++p+ +++++++      +  ++P   +++++s q+++Pp+ +  + s s+ +  e p+sp  q       +p+++++  ++P ++++ ++q+q+ q+++pq+
  MMETSP1325-20131115|2692_1  11 LQHQWQGQHHTMQQQYQQQEAPRMSRAQAAEAEARARMGYPQQPQYQQAPQTQR---YGSEAPVPALNMQQQASYQQKAPPPMNVHDGSYSAREHREGPPSPLSQLVAggqaPPPQQQQHYQQPPPPQQ-QQQQQHYQQQPPQS 150
                 222222223333324444555555555555555555555555555544444443...56666677668999999********99999999998888888888776655444466666777777777765.33444555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       958  (0.0700702); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.82u 0.38s 00:00:01.20 Elapsed: 00:00:00.60
# Mc/sec: 922.60
//
Query:       MMETSP1325-20131115|2694_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|2696_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 379.42
//
Query:       MMETSP1325-20131115|2698_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|2700_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|2699_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-32  112.9   0.3      5e-32  111.1   0.2    1.7  1  PF08214.6 Histone acetylation protein


Domain annotation for each model (and alignments):
>> PF08214.6  Histone acetylation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   0.2   3.6e-36     5e-32      78     238 ..       3     135 ..       1     146 [. 0.91

  Alignments for each domain:
  == domain 1    score: 111.1 bits;  conditional E-value: 3.6e-36
   PF08214.6  78 cdeanertiFvSkaDstgylkllklrvadvheilisYLisikqrgytrkvilaLFtraqdqYLF...PessknpkKHvLddrgLlkWwikvldkaleesaksakaklvipgsdkyetrkfipaeaksktWtvghileeisddkavyeiPlFpDDpkgrfleeli 238
                  +++n r+i+vS++Ds++y++++++r+a++ e l++YL+  k rg+ +++i+a+++ ++d+Y+F   Pe++k+pk     +++L++W+i +l+k          + +v   ++ +++ + +p+++                    + +P+F++D++   +e + 
  MMETSP1325-20131115|2699_1   3 APQPNHRRIYVSYLDSVHYFRPRQYRTAVYQELLVAYLHLSKLRGFHTCHIWACPPCKGDDYIFfchPEEQKTPK-----EDRLRNWYITMLEKSR-------AEGVVCHLTNLFDECFKLPESKA-------------------TGVPYFEGDYWISEAEAIL 135
                 5789***********************************************************************.....****************.......**************777777665...................689*******977666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 733.88
//
Query:       MMETSP1325-20131115|2701_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.038   13.9   0.2       0.08   12.9   0.2    1.5  1  PF00193.12 Extracellular link domain
       0.46    8.9   2.2       0.55    8.7   1.5    1.0  1  PF07227.6  Protein of unknown function (DUF1423)


Domain annotation for each model (and alignments):
>> PF00193.12  Extracellular link domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   1.2e-05      0.08      14      41 ..      15      42 ..      10      52 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.2e-05
  PF00193.12 14 ltfeeAakaCkeegarlatveqleaAyk 41
                +t+eeA+k+C++ garl t  +l +  +
  MMETSP1325-20131115|2701_1 15 VTHEEAKKFCQAAGARLCTATELVDNTE 42
                799*****************99987665 PP

>> PF07227.6  Protein of unknown function (DUF1423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   1.5   8.1e-05      0.55     113     178 ..      10      79 ..       8      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 8.1e-05
   PF07227.6 113 dCeckiCs.nkkGFCslCmCvvCskFDfavnt.CrWvGC..DvcshWthtdCaireslirkGkslksasg 178
                 +C+  +   + k FC++    +C+  ++  nt  r  GC  D  + Wt t+C   + l+  G+s+++++ 
  MMETSP1325-20131115|2701_1  10 ECSGYVTHeEAKKFCQAAGARLCTATELVDNTeTRGTGCgyDSKLIWTSTACDGGSFLVGYGNSASKGTE 79 
                 5666665414688************999999955667775588899*******9999*****99988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 581.24
//
Query:       MMETSP1325-20131115|2706_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|2705_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-09   37.1   1.6    1.3e-05   24.6   0.0    3.2  3  PF13414.1  TPR repeat
    9.2e-09   34.4   6.5       0.16   11.8   0.0    4.3  4  PF07719.12 Tetratricopeptide repeat
      3e-08   33.4   0.6       0.51   10.9   0.0    4.2  4  PF13428.1  Tetratricopeptide repeat
    2.4e-07   30.4   2.4     0.0084   15.9   0.4    4.0  3  PF13424.1  Tetratricopeptide repeat
    5.6e-07   29.9   2.7      0.012   16.1   0.1    3.8  3  PF13432.1  Tetratricopeptide repeat
    3.7e-05   23.4   1.3        3.4    7.9   0.0    3.9  3  PF13431.1  Tetratricopeptide repeat
    0.00013   21.5   2.0       0.36   10.5   0.1    3.5  3  PF13371.1  Tetratricopeptide repeat
    0.00018   20.8   6.7       0.24   10.9   0.0    4.3  4  PF00515.23 Tetratricopeptide repeat
      0.001   18.5   2.4         10    6.0   0.0    4.3  4  PF13176.1  Tetratricopeptide repeat
     0.0013   18.4   4.2       0.53   10.1   0.0    4.1  4  PF13374.1  Tetratricopeptide repeat
     0.0027   17.2   3.2       0.83    9.4   0.0    3.9  4  PF13181.1  Tetratricopeptide repeat
     0.0042   17.3   4.0         14    6.3   0.3    4.2  4  PF13174.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.02   15.1   0.2         23    5.6   0.0    3.5  3  PF07721.9  Tetratricopeptide repeat
       0.12   11.6   0.0       0.19   11.0   0.0    1.3  1  PF03444.10 Winged helix-turn-helix transcription repressor, HrcA DNA-binding
       0.38   10.4   2.5        4.8    6.8   0.0    3.1  3  PF12968.2  Domain of Unknown Function (DUF3856)


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.18   1.6e+02       8      24 ..      21      37 ..      18      42 .. 0.75
   2 !    8.7   0.0    0.0013       1.2      16      48 ..      66      98 ..      56     107 .. 0.80
   3 !   24.6   0.0   1.4e-08   1.3e-05       9      66 ..     107     167 ..     103     168 .] 0.89

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.18
   PF13414.1  8 elGnalfkegdydeAie 24
                +++  l ++gdy++A +
  MMETSP1325-20131115|2705_1 21 NKAITLANAGDYAGAAK 37
                56777888888888876 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0013
   PF13414.1 16 egdydeAieayekAleldpnnaelyynlAlayl 48
                e++++eA +++ek le  p+++  + n  ++++
  MMETSP1325-20131115|2705_1 66 ERKLEEAAAKFEKVLEQMPEDPGTLQNYNQVLI 98
                6799****************9998888776666 PP

  == domain 3    score: 24.6 bits;  conditional E-value: 1.4e-08
   PF13414.1   9 lGnalfkegdydeAieayekAlel.dpnnae....lyynlAlaylklgkdyeeAledyekAle 66 
                 +Gn+  ++g+y+eA e+y+ +++l dp +++    + +n + ++ + g + +eAl+++e Ale
  MMETSP1325-20131115|2705_1 107 KGNQMRQAGQYAEAAEMYN-SIDLdDPVSPDlrfhVANNFGIVLKQIG-RSHEALQAFETALE 167
                 8*****************8.5666368888899999999*********.68**********98 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.019        18       6      23 ..      21      38 ..      19      42 .. 0.86
   2 !   11.8   0.0   0.00017      0.16      14      34 .]      66      86 ..      60      86 .. 0.88
   3 !    7.4   0.4    0.0044         4       7      25 ..     107     125 ..     105     126 .. 0.88
   4 !   10.3   0.0   0.00055       0.5       6      29 ..     144     167 ..     140     168 .] 0.89

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.019
                HHHHHHHHTT-HHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAlea 23
                n +  ++++gdy+ A++ 
  MMETSP1325-20131115|2705_1 21 NKAITLANAGDYAGAAKE 38
                67999**********986 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00017
                TT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12 14 lgdyeeAleafekAleldPnn 34
                 +++eeA++ fek+le  P++
  MMETSP1325-20131115|2705_1 66 ERKLEEAAAKFEKVLEQMPED 86
                5789**************986 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0044
                 HHHHHHHTT-HHHHHHHHH CS
  PF07719.12   7 lGlayyklgdyeeAleafe 25 
                  G+  +++g+y+eA+e ++
  MMETSP1325-20131115|2705_1 107 KGNQMRQAGQYAEAAEMYN 125
                 588999*********9885 PP

  == domain 4    score: 10.3 bits;  conditional E-value: 0.00055
                 HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAle 29 
                 n G ++ + g+  eAl+afe Ale
  MMETSP1325-20131115|2705_1 144 NFGIVLKQIGRSHEALQAFETALE 167
                 568999999*************98 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.023        21       8      37 ..      23      49 ..      17      56 .. 0.80
   2 !    8.6   0.0    0.0033         3      15      41 ..      67      93 ..      58      96 .. 0.80
   3 !   10.9   0.0   0.00056      0.51       8      39 ..     108     139 ..     104     143 .. 0.82
   4 ?    3.4   0.0      0.15   1.4e+02       9      29 ..     147     167 ..     144     168 .] 0.82

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.023
   PF13428.1  8 arallalGdpdeAiallrralalaPddaea 37
                a+ l+++Gd+++A++   ++   +Pd++ +
  MMETSP1325-20131115|2705_1 23 AITLANAGDYAGAAKEMSAV---SPDSPLL 49
                78899*********988888...6666654 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0033
   PF13428.1 15 GdpdeAiallrralalaPddaealllL 41
                  ++eA+a ++++l++ P+d+  l ++
  MMETSP1325-20131115|2705_1 67 RKLEEAAAKFEKVLEQMPEDPGTLQNY 93
                458*****************9887765 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 0.00056
   PF13428.1   8 arallalGdpdeAiallrralalaPddaeall 39 
                 ++ ++++G+++eA+++++ +  ++P ++++++
  MMETSP1325-20131115|2705_1 108 GNQMRQAGQYAEAAEMYNSIDLDDPVSPDLRF 139
                 56799*************99777787777765 PP

  == domain 4    score: 3.4 bits;  conditional E-value: 0.15
   PF13428.1   9 rallalGdpdeAiallrrala 29 
                 ++l + G+  eA+++++ al+
  MMETSP1325-20131115|2705_1 147 IVLKQIGRSHEALQAFETALE 167
                 577788999999999999986 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1      0.13   1.2e+02      38      60 ..      14      37 ..       1      41 [. 0.62
   2 !    7.4   0.0    0.0039       3.6       5      50 ..      52      94 ..      44      98 .. 0.77
   3 !   15.9   0.4   9.2e-06    0.0084      15      74 ..     111     167 ..     105     168 .] 0.67

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.13
   PF13424.1 38 lgd.dhpdtaralnnlanlylalg 60
                +gd d ++ a +l n +++  a++
  MMETSP1325-20131115|2705_1 14 MGDrDKLNKAITLANAGDYAGAAK 37
                455367788888888887766655 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0039
   PF13424.1  5 atilnnlalvlr.rlgdydeAlelyekalellrelgddhpdtaraln 50
                 ++++  + +l+  +++++eA + +ek+le     ++d p t+  +n
  MMETSP1325-20131115|2705_1 52 TQVMSLHGVILWrGERKLEEAAAKFEKVLEQM---PED-PGTLQNYN 94
                46778889999999**************9763...443.45666555 PP

  == domain 3    score: 15.9 bits;  conditional E-value: 9.2e-06
   PF13424.1  15 lrrlgdydeAlelyekalellrelgddhpdt.aralnnlanlylalgdydeAleylekAle 74 
                  r+ g+y eA e+y+   +l     + +pd+   + nn ++++ + g+  eAl+ +e Ale
  MMETSP1325-20131115|2705_1 111 MRQAGQYAEAAEMYNSI-DLD---DPVSPDLrFHVANNFGIVLKQIGRSHEALQAFETALE 167
                 56778888888777763.443...3334433256778888888888888888888888886 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.3e-05     0.012       2      65 .]      21      87 ..      20      87 .. 0.89
   2 !   10.1   0.0     0.001      0.92      11      41 ..      67      97 ..      57     101 .. 0.87
   3 !    8.8   0.3    0.0025       2.3       3      38 ..     107     142 ..     105     168 .] 0.62

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.3e-05
   PF13432.1  2 alArallraGdydeAlaaleaalalaPe..aaeallllaeallrl.grldeAaallraalalaPddp 65
                 +A  l +aGdy+ A++  +a+  + P+    +++ l +++l+r   +l+eAaa +++ l+  P dp
  MMETSP1325-20131115|2705_1 21 NKAITLANAGDYAGAAKEMSAVSPDSPLlaTTQVMSLHGVILWRGeRKLEEAAAKFEKVLEQMPEDP 87
                68999*********************8888*************7746666666**********9987 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.001
   PF13432.1 11 GdydeAlaaleaalalaPeaaeallllaeal 41
                ++++eA+a +e++l++ Pe++  l+++ ++l
  MMETSP1325-20131115|2705_1 67 RKLEEAAAKFEKVLEQMPEDPGTLQNYNQVL 97
                679*****************99999888775 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.0025
   PF13432.1   3 lArallraGdydeAlaaleaalalaPeaaealllla 38 
                 +++   +aG+y+eA++ ++ +  ++P  ++ ++  a
  MMETSP1325-20131115|2705_1 107 KGNQMRQAGQYAEAAEMYNSIDLDDPVSPDLRFHVA 142
                 677778999999999999776666665555554444 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.2     0.068        62      18      32 ..      21      35 ..      20      37 .. 0.89
   2 !    7.9   0.0    0.0038       3.4       2      30 ..      76     111 ..      75     122 .. 0.77
   3 !    7.7   0.0    0.0046       4.2      10      34 .]     132     160 ..     123     160 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.068
   PF13431.1 18 nLAelllnnGdleeA 32
                n+A +l+n+Gd++ A
  MMETSP1325-20131115|2705_1 21 NKAITLANAGDYAGA 35
                89**********987 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0038
   PF13431.1   2 yekaleldPnnadaynnLAelll.......nnGdle 30 
                 +ek le+ P+++  ++n+ ++l        ++G+++
  MMETSP1325-20131115|2705_1  76 FEKVLEQMPEDPGTLQNYNQVLIaikvdkaKKGNQM 111
                 89****************999987888888444443 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0046
   PF13431.1  10 Pnnadayn....nLAelllnnGdleeAeq 34 
                 P ++d+++    n++ +l+ +G++ eA+q
  MMETSP1325-20131115|2705_1 132 PVSPDLRFhvanNFGIVLKQIGRSHEALQ 160
                 666666666666***************87 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.023        21      33      55 ..      20      42 ..       3      55 .. 0.84
   2 ?    3.7   0.0     0.055        50      45      63 ..      69      87 ..      66      92 .. 0.89
   3 !   10.5   0.1    0.0004      0.36       8      57 ..     114     167 ..     110     168 .] 0.73

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.023
   PF13371.1 33 RDrGlllaqlgclaaAaedLeaf 55
                   ++ la  g++a+Aa++++a 
  MMETSP1325-20131115|2705_1 20 LNKAITLANAGDYAGAAKEMSAV 42
                567999*************9986 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.055
   PF13371.1 45 laaAaedLeaflelcpdap 63
                l++Aa+ +e  le+ p++p
  MMETSP1325-20131115|2705_1 69 LEEAAAKFEKVLEQMPEDP 87
                789*************998 PP

  == domain 3    score: 10.5 bits;  conditional E-value: 0.0004
   PF13371.1   8 eedferALavverllllaPddpyerRDr....GlllaqlgclaaAaedLeafle 57 
                 ++++++A ++++++ l +P +p +r       G++l q g+ ++A++++e++le
  MMETSP1325-20131115|2705_1 114 AGQYAEAAEMYNSIDLDDPVSPDLRFHVannfGIVLKQIGRSHEALQAFETALE 167
                 566666777777776667776666654322229******************997 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2      0.23   2.1e+02       6      20 ..      21      35 ..      19      37 .. 0.85
   2 ?    4.3   0.0     0.033        30      15      33 ..      67      85 ..      63      86 .. 0.87
   3 ?    4.5   0.2     0.028        25      12      25 ..     112     125 ..     106     126 .. 0.86
   4 !   10.9   0.0   0.00026      0.24       8      29 ..     146     167 ..     143     168 .] 0.93

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.23
                HHHHHHHHTT-HHHH CS
  PF00515.23  6 nlGnaylklgkydeA 20
                n++ ++ + g+y  A
  MMETSP1325-20131115|2705_1 21 NKAITLANAGDYAGA 35
                9999999****9887 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.033
                T-HHHHHHHHHHHHHHHTT CS
  PF00515.23 15 gkydeAleyyekALelnPn 33
                 k++eA + +ek+Le  P+
  MMETSP1325-20131115|2705_1 67 RKLEEAAAKFEKVLEQMPE 85
                589************8776 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.028
                 HHTT-HHHHHHHHH CS
  PF00515.23  12 lklgkydeAleyye 25 
                 ++ g+y eA e y+
  MMETSP1325-20131115|2705_1 112 RQAGQYAEAAEMYN 125
                 578********997 PP

  == domain 4    score: 10.9 bits;  conditional E-value: 0.00026
                 HHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23   8 GnaylklgkydeAleyyekALe 29 
                 G ++ + g+  eAl+++e ALe
  MMETSP1325-20131115|2705_1 146 GIVLKQIGRSHEALQAFETALE 167
                 889999***************8 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.4   1.2e+03       6      19 ..      23      36 ..      20      37 .. 0.75
   2 ?    6.0   0.0     0.011        10       8      32 ..      62      87 ..      59      89 .. 0.76
   3 ?    4.0   0.1     0.051        47      10      22 ..     112     124 ..     111     131 .. 0.91
   4 ?    4.7   0.0      0.03        28       2      20 ..     149     167 ..     148     168 .] 0.78

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 1.4
   PF13176.1  6 arlysrlgdyekAi 19
                a +  + gdy  A+
  MMETSP1325-20131115|2705_1 23 AITLANAGDYAGAA 36
                66788899999987 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.011
   PF13176.1  8 lysrlgdyekAielyeraL.altkdp 32
                l++  ++ e+A+  +e+ L ++ +dp
  MMETSP1325-20131115|2705_1 62 LWRGERKLEEAAAKFEKVLeQMPEDP 87
                47779999*********665555555 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.051
   PF13176.1  10 srlgdyekAiely 22 
                 ++ g+y +A+e+y
  MMETSP1325-20131115|2705_1 112 RQAGQYAEAAEMY 124
                 578********99 PP

  == domain 4    score: 4.7 bits;  conditional E-value: 0.03
   PF13176.1   2 llnLarlysrlgdyekAie 20 
                 l +++r +++l+ +e+A+e
  MMETSP1325-20131115|2705_1 149 LKQIGRSHEALQAFETALE 167
                 6678888888888888876 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.39   3.6e+02       9      22 ..      23      36 ..      20      42 .. 0.83
   2 ?    1.6   0.0      0.27   2.5e+02      10      30 ..      60      81 ..      56      81 .. 0.77
   3 ?    3.6   0.1     0.063        57      13      25 ..     112     124 ..     110     127 .. 0.82
   4 !   10.1   0.0   0.00058      0.53       5      30 ..     142     167 ..     140     168 .] 0.94

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.39
   PF13374.1  9 AlalrargryeeAl 22
                A++l++ g+y+ A 
  MMETSP1325-20131115|2705_1 23 AITLANAGDYAGAA 36
                899*******9886 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.27
   PF13374.1 10 lalrar.gryeeAlaleeeala 30
                ++l++  +++eeA a +e++l+
  MMETSP1325-20131115|2705_1 60 VILWRGeRKLEEAAAKFEKVLE 81
                5667777899999998888885 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.063
   PF13374.1  13 rargryeeAlale 25 
                 r+ g+y+eA +++
  MMETSP1325-20131115|2705_1 112 RQAGQYAEAAEMY 124
                 566******9998 PP

  == domain 4    score: 10.1 bits;  conditional E-value: 0.00058
   PF13374.1   5 lnnLAlalrargryeeAlaleeeala 30 
                 +nn +++l + gr  eAl+ +e al+
  MMETSP1325-20131115|2705_1 142 ANNFGIVLKQIGRSHEALQAFETALE 167
                 7*********************9997 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.69   6.3e+02       6      20 ..      21      35 ..      20      40 .. 0.61
   2 ?   -0.6   0.0       1.4   1.3e+03      16      29 ..      68      81 ..      59      81 .. 0.81
   3 ?    4.2   0.3     0.044        40      12      25 ..     112     125 ..     105     127 .. 0.87
   4 !    9.4   0.0   0.00091      0.83       5      29 ..     143     167 ..     139     168 .] 0.89

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.69
                T---HHHHTT-HHHH CS
   PF13181.1  6 nlGdiYrqlGdydkA 20
                n++ ++++ Gdy  A
  MMETSP1325-20131115|2705_1 21 NKAITLANAGDYAGA 35
                455566666777655 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 1.4
                -HHHHHHHHH---H CS
   PF13181.1 16 dydkAkeylekale 29
                + ++A + +ek+le
  MMETSP1325-20131115|2705_1 68 KLEEAAAKFEKVLE 81
                56899999999997 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.044
                 HHTT-HHHHHHHHH CS
   PF13181.1  12 rqlGdydkAkeyle 25 
                 rq G+y +A e ++
  MMETSP1325-20131115|2705_1 112 RQAGQYAEAAEMYN 125
                 899********998 PP

  == domain 4    score: 9.4 bits;  conditional E-value: 0.00091
                 TT---HHHHTT-HHHHHHHHH---H CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekale 29 
                 +n G +++q G+ ++A++++e ale
  MMETSP1325-20131115|2705_1 143 NNFGIVLKQIGRSHEALQAFETALE 167
                 678999*****************98 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.65   5.9e+02       5      24 ..      21      40 ..      10      46 .. 0.79
   2 ?    4.3   0.0     0.065        59       8      29 ..      60      82 ..      53      86 .. 0.75
   3 ?    6.3   0.3     0.015        14       7      25 ..     108     126 ..     105     127 .. 0.82
   4 ?    3.5   0.0      0.11     1e+02      11      28 ..     150     167 ..     146     168 .] 0.71

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.65
                HHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAleale 24
                + a  + ++gd++ A + + 
  MMETSP1325-20131115|2705_1 21 NKAITLANAGDYAGAAKEMS 40
                56677778889999988765 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.065
                HHHHH.HHHHHHHHHHHHHHHHH CS
   PF13174.1  8 lsyyk.lgdtdeAlealerlike 29
                 ++ +   + +eA + +e+++++
  MMETSP1325-20131115|2705_1 60 VILWRgERKLEEAAAKFEKVLEQ 82
                55555335899*********997 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.015
                 HHHHHHHHHHHHHHHHHHH CS
   PF13174.1   7 alsyyklgdtdeAlealer 25 
                 +  ++++g+++eA e+++ 
  MMETSP1325-20131115|2705_1 108 GNQMRQAGQYAEAAEMYNS 126
                 56688889********986 PP

  == domain 4    score: 3.5 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHHH CS
   PF13174.1  11 yklgdtdeAlealerlik 28 
                 ++ g++ eAl+a+e  ++
  MMETSP1325-20131115|2705_1 150 KQIGRSHEALQAFETALE 167
                 555688889999987765 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.025        23       5      21 ..      20      36 ..      19      37 .. 0.89
   2 ?    4.1   0.0      0.08        73      12      23 ..     112     123 ..     108     125 .. 0.84
   3 ?    0.5   0.0       1.1     1e+03      15      25 ..     153     163 ..     147     164 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.025
                ---HHHHHH-------H CS
   PF07721.9  5 laLArallalGdldeAr 21
                l+ A +l+ +Gd++ A+
  MMETSP1325-20131115|2705_1 20 LNKAITLANAGDYAGAA 36
                57799*********996 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.08
                 HH-------HHH CS
   PF07721.9  12 lalGdldeAral 23 
                  ++G+++eA+++
  MMETSP1325-20131115|2705_1 112 RQAGQYAEAAEM 123
                 689******987 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 1.1
                 ------HHHHH CS
   PF07721.9  15 GdldeAralle 25 
                 G++ eA++++e
  MMETSP1325-20131115|2705_1 153 GRSHEALQAFE 163
                 999****9887 PP

>> PF03444.10  Winged helix-turn-helix transcription repressor, HrcA DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00021      0.19      20      74 ..      70     128 ..      57     132 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00021
  PF03444.10  20 kkravKgeeiAevlkrneGtvRNqlqsLkalgLvegvpGPk....GGYkPtlkayealk 74 
                 +++a K e++ e++  ++Gt+ N  q+L a+++ +++ G +    G Y   ++ y++++
  MMETSP1325-20131115|2705_1  70 EEAAAKFEKVLEQMPEDPGTLQNYNQVLIAIKVDKAKKGNQmrqaGQYAEAAEMYNSID 128
                 4778999************************9999999964333377777777777766 PP

>> PF12968.2  Domain of Unknown Function (DUF3856)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         3   2.8e+03     105     123 ..      21      39 ..      17      43 .. 0.70
   2 ?    0.8   0.0      0.39   3.5e+02     116     141 ..      69      94 ..      54      97 .. 0.81
   3 ?    6.8   0.0    0.0053       4.8     107     128 ..     146     167 ..     136     168 .] 0.85

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 3
   PF12968.2 105 sravaleelGrkeealkef 123
                 ++a++l++ G    a+ke+
  MMETSP1325-20131115|2705_1  21 NKAITLANAGDYAGAAKEM 39 
                 6777777777777777765 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.39
   PF12968.2 116 keealkefrkagemiaerkGelkgke 141
                  eea+ +f+k+ e + e  G l++ +
  MMETSP1325-20131115|2705_1  69 LEEAAAKFEKVLEQMPEDPGTLQNYN 94 
                 58999999999999999999888765 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0053
   PF12968.2 107 avaleelGrkeealkefrkage 128
                 ++ l+++Gr++eal++f++a e
  MMETSP1325-20131115|2705_1 146 GIVLKQIGRSHEALQAFETALE 167
                 6789**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       601  (0.0439585); expected 273.4 (0.02)
Passed bias filter:                      524  (0.0383265); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.52u 0.40s 00:00:00.92 Elapsed: 00:00:00.68
# Mc/sec: 592.04
//
Query:       MMETSP1325-20131115|2702_1  [L=271]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-22   77.7   7.7    1.6e-10   40.6   1.7    3.2  3  PF13424.1  Tetratricopeptide repeat
    1.4e-18   65.4   9.9    8.8e-06   24.9   1.5    4.2  4  PF00515.23 Tetratricopeptide repeat
    1.7e-18   65.6   4.0    2.5e-07   30.2   0.2    4.4  4  PF13374.1  Tetratricopeptide repeat
    6.5e-17   60.8  14.4    3.4e-10   39.3   2.5    3.1  3  PF13414.1  TPR repeat
    1.8e-14   52.2   9.4    0.00013   21.5   1.0    4.4  4  PF07719.12 Tetratricopeptide repeat
    2.5e-12   45.5   4.8    0.00029   20.2   0.4    4.4  4  PF13181.1  Tetratricopeptide repeat
    4.6e-08   32.1   7.9     0.0024   17.4   0.3    4.3  4  PF13176.1  Tetratricopeptide repeat
    7.1e-06   25.7   0.3       0.25   11.1   0.1    3.1  2  PF04212.13 MIT (microtubule interacting and transport) domain
    0.00011   22.3   5.6       0.85   10.3   0.2    4.3  4  PF13428.1  Tetratricopeptide repeat
    0.00086   18.3   3.1     0.0036   16.2   0.4    2.1  2  PF13429.1  Tetratricopeptide repeat
     0.0024   18.3   1.8     0.0024   18.3   1.2    3.2  3  PF13432.1  Tetratricopeptide repeat
     0.0077   16.2   7.5       0.17   11.9   2.1    2.7  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
  ------ inclusion threshold ------
      0.047   13.0   0.5       0.11   11.8   0.2    1.7  2  PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
      0.077   12.8   0.8       0.41   10.4   0.3    2.0  2  PF10952.3  Protein of unknown function (DUF2753)
        0.1   11.3   0.0       0.14   10.9   0.0    1.2  1  PF13507.1  CobB/CobQ-like glutamine amidotransferase domain
       0.23   11.2   5.5          5    6.9   2.3    3.2  2  PF13371.1  Tetratricopeptide repeat
       0.28   11.6   3.1        6.3    7.4   0.1    3.9  4  PF07721.9  Tetratricopeptide repeat
       0.36   11.2   5.5        1.3    9.4   0.2    3.8  4  PF13174.1  Tetratricopeptide repeat
       0.59   10.3   5.3       0.83    9.9   0.1    3.5  4  PF13431.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   1.7   2.2e-13   1.6e-10       9      76 ..      11      75 ..       6      77 .. 0.92
   2 !   17.6   0.1   3.4e-06    0.0024       5      36 ..      85     117 ..      82     123 .. 0.77
   3 !   20.8   0.0   3.4e-07   0.00025       4      50 ..     141     188 ..     138     195 .. 0.87

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 2.2e-13
   PF13424.1  9 nnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                n la ++++++d+   lel++ka  l     +d++ +a++ nnla +y+++g++ +Al+yl+kAl+i 
  MMETSP1325-20131115|2702_1 11 NLLAMTYLQQEDFAMVLELLKKAEILT---ERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIE 75
                789********************9884...5688899*****************************96 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 3.4e-06
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalel.lr 36 
                 a+++ n   vl +lg++++Ale+ ++al l ++
  MMETSP1325-20131115|2702_1  85 ADTYLNTCAVLSQLGRHQSALEHAQQALILlQE 117
                 678888888888888888888888888888554 PP

  == domain 3    score: 20.8 bits;  conditional E-value: 3.4e-07
   PF13424.1   4 latilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaraln 50 
                 la++++n +  ++ l+++d++l+ y+k +e+  r lg+dh+ t+++ n
  MMETSP1325-20131115|2702_1 141 LAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVsERFLGPDHAITVTLRN 188
                 6899***************************55556****99876554 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.1   0.00074      0.53       4      27 ..      10      33 ..       8      35 .. 0.93
   2 !   24.9   1.5   1.2e-08   8.8e-06       1      31 [.      45      75 ..      45      77 .. 0.94
   3 !   14.6   0.0   2.3e-05     0.016       1      30 [.      85     114 ..      85     117 .. 0.93
   4 !   18.5   0.0   1.4e-06   0.00098       1      31 [.     142     172 ..     142     175 .. 0.92

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00074
                HHHHHHHHHHTT-HHHHHHHHHHH CS
  PF00515.23  4 lynlGnaylklgkydeAleyyekA 27
                ++ l+++yl+++++   le  +kA
  MMETSP1325-20131115|2702_1 10 CNLLAMTYLQQEDFAMVLELLKKA 33
                689*******************99 PP

  == domain 2    score: 24.9 bits;  conditional E-value: 1.2e-08
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23  1 akalynlGnaylklgkydeAleyyekALeln 31
                a +++nl+  y+++gk+  Al+y +kAL+++
  MMETSP1325-20131115|2702_1 45 AVTFNNLACYYRRQGKLHAALQYLQKALKIE 75
                5689*************************95 PP

  == domain 3    score: 14.6 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALel 30 
                 a+++ n  +++ +lg+++ Ale+ ++AL l
  MMETSP1325-20131115|2702_1  85 ADTYLNTCAVLSQLGRHQSALEHAQQALIL 114
                 78999**********************965 PP

  == domain 4    score: 18.5 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALeln 31 
                 a a+ n G+ y  l+k+d+ l+ y+k +e+ 
  MMETSP1325-20131115|2702_1 142 AIAYHNVGVEYEFLKKFDQSLQSYRKGVEVS 172
                 679***********************99986 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.018        13       5      28 ..      10      33 ..       7      39 .. 0.88
   2 !   30.2   0.2   3.5e-10   2.5e-07       2      41 ..      45      85 ..      44      86 .. 0.88
   3 !   12.4   0.1   0.00014       0.1      11      33 ..      94     116 ..      93     125 .. 0.88
   4 !   15.5   0.0   1.5e-05     0.011       2      41 ..     142     181 ..     141     182 .. 0.96

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.018
   PF13374.1  5 lnnLAlalrargryeeAlaleeea 28
                +n LA+++ ++ +++  l+l+ +a
  MMETSP1325-20131115|2702_1 10 CNLLAMTYLQQEDFAMVLELLKKA 33
                799***************999887 PP

  == domain 2    score: 30.2 bits;  conditional E-value: 3.5e-10
   PF13374.1  2 aaalnnLAlalrargryeeAlaleeealairrrl.lGddHP 41
                a + nnLA ++r++g++ +Al+++++al i  +l   d+++
  MMETSP1325-20131115|2702_1 45 AVTFNNLACYYRRQGKLHAALQYLQKALKIENKLdQVDNPA 85
                6788***************************9996655655 PP

  == domain 3    score: 12.4 bits;  conditional E-value: 0.00014
   PF13374.1  11 alrargryeeAlaleeealairr 33 
                 +l+++gr++ Al+++++al++ +
  MMETSP1325-20131115|2702_1  94 VLSQLGRHQSALEHAQQALILLQ 116
                 799****************9876 PP

  == domain 4    score: 15.5 bits;  conditional E-value: 1.5e-05
   PF13374.1   2 aaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                 a a++n+++ +  ++++++ l+ +++ +++ +r lG+dH+
  MMETSP1325-20131115|2702_1 142 AIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHA 181
                 889************************************6 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   2.2   2.4e-08   1.8e-05       7      67 ..      11      74 ..       8      76 .. 0.85
   2 !   39.3   2.5   4.7e-13   3.4e-10       2      67 ..      44     114 ..      43     116 .. 0.89
   3 !   15.4   0.0   1.3e-05    0.0094       3      38 ..     142     182 ..     140     197 .. 0.81

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 2.4e-08
   PF13414.1  7 kelGnalfkegdydeAieayekAlel.dpnn...aelyynlAlaylklgkdyeeAledyekAlel 67
                + l++ ++++ d++  +e+++kA  l + +n   a+ ++nlA  y+++gk  ++Al++++kAl++
  MMETSP1325-20131115|2702_1 11 NLLAMTYLQQEDFAMVLELLKKAEILtERDNagrAVTFNNLACYYRRQGK-LHAALQYLQKALKI 74
                6799*******************6662444444477*************5.79**********98 PP

  == domain 2    score: 39.3 bits;  conditional E-value: 4.7e-13
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleld......pnnaelyynlAlaylklgkdyeeAledyekAlel 67 
                 +A ++++l+ ++ ++g+++ A+++++kAl+++       n a+ y+n ++++ +lg+  ++Ale++++Al l
  MMETSP1325-20131115|2702_1  44 RAVTFNNLACYYRRQGKLHAALQYLQKALKIEnkldqvDNPADTYLNTCAVLSQLGR-HQSALEHAQQALIL 114
                 58899*************************9655556577799*************6.69*********965 PP

  == domain 3    score: 15.4 bits;  conditional E-value: 1.3e-05
   PF13414.1   3 AealkelGnalfkegdydeAieayekAleld.....pnnae 38 
                 A a+ + G ++  ++++d++++ y+k++e +     p++a+
  MMETSP1325-20131115|2702_1 142 AIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSerflgPDHAI 182
                 899*************************9543344499887 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0018       1.3       3      30 ..       9      36 ..       7      40 .. 0.87
   2 !   21.5   1.0   1.8e-07   0.00013       4      32 ..      48      76 ..      45      78 .. 0.91
   3 !   12.5   0.1   0.00014     0.098       2      30 ..      86     114 ..      85     117 .. 0.88
   4 !   12.1   0.0   0.00017      0.12       1      30 [.     142     171 ..     142     175 .. 0.92

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0018
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAlel 30
                 +++l++ y+++ d++  le+++kA  l
  MMETSP1325-20131115|2702_1  9 MCNLLAMTYLQQEDFAMVLELLKKAEIL 36
                5899********************9655 PP

  == domain 2    score: 21.5 bits;  conditional E-value: 1.8e-07
                HHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12  4 lynlGlayyklgdyeeAleafekAleldP 32
                 +nl++ y+++g++  Al++++kAl+++ 
  MMETSP1325-20131115|2702_1 48 FNNLACYYRRQGKLHAALQYLQKALKIEN 76
                68************************975 PP

  == domain 3    score: 12.5 bits;  conditional E-value: 0.00014
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAlel 30 
                 + + n   ++ +lg+++ Ale+ ++Al l
  MMETSP1325-20131115|2702_1  86 DTYLNTCAVLSQLGRHQSALEHAQQALIL 114
                 67788889999***************977 PP

  == domain 4    score: 12.1 bits;  conditional E-value: 0.00017
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAlel 30 
                 a a++n G  y+ l+++++ l+ ++k +e 
  MMETSP1325-20131115|2702_1 142 AIAYHNVGVEYEFLKKFDQSLQSYRKGVEV 171
                 689***********************9885 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.039        28       3      27 ..       9      33 ..       7      34 .. 0.82
   2 !   20.2   0.4     4e-07   0.00029       5      32 ..      49      76 ..      45      79 .. 0.93
   3 ?    3.9   0.0     0.066        48      11      28 ..      95     112 ..      93     112 .. 0.90
   4 !   15.2   0.0   1.6e-05     0.012       3      33 ..     144     174 ..     142     175 .. 0.92

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.039
                -TTT---HHHHTT-HHHHHHHHH-- CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeyleka 27
                 +++l+++Y+q  d+   +e l+ka
  MMETSP1325-20131115|2702_1  9 MCNLLAMTYLQQEDFAMVLELLKKA 33
                6899**********98777766665 PP

  == domain 2    score: 20.2 bits;  conditional E-value: 4e-07
                TT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1  5 ynlGdiYrqlGdydkAkeylekalelkp 32
                +nl++ Yr  G+ ++A++yl+kal++ +
  MMETSP1325-20131115|2702_1 49 NNLACYYRRQGKLHAALQYLQKALKIEN 76
                79***********************987 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.066
                 HHHTT-HHHHHHHHH--- CS
   PF13181.1  11 YrqlGdydkAkeylekal 28 
                 + qlG++ +A+e+ ++al
  MMETSP1325-20131115|2702_1  95 LSQLGRHQSALEHAQQAL 112
                 789**********99997 PP

  == domain 4    score: 15.2 bits;  conditional E-value: 1.6e-05
                 -TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkpr 33 
                 ay+n G  Y+ l+++d+++++++k +e + r
  MMETSP1325-20131115|2702_1 144 AYHNVGVEYEFLKKFDQSLQSYRKGVEVSER 174
                 799**********************998865 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.1    0.0037       2.6       2      24 ..      10      32 ..      10      42 .. 0.89
   2 !   17.4   0.3   3.4e-06    0.0024       1      31 [.      47      77 ..      47      82 .. 0.89
   3 ?    6.0   0.1     0.014        10       9      31 ..      95     117 ..      89     122 .. 0.76
   4 ?    2.6   0.0      0.18   1.3e+02       1      32 [.     144     173 ..     144     176 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0037
   PF13176.1  2 llnLarlysrlgdyekAielyer 24
                ++ La +y ++ d+   +el+++
  MMETSP1325-20131115|2702_1 10 CNLLAMTYLQQEDFAMVLELLKK 32
                689******************99 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 3.4e-06
   PF13176.1  1 allnLarlysrlgdyekAielyeraLaltkd 31
                + +nLa  y+r+g+   A++++++aL++++ 
  MMETSP1325-20131115|2702_1 47 TFNNLACYYRRQGKLHAALQYLQKALKIENK 77
                579*********************9998865 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.014
   PF13176.1   9 ysrlgdyekAielyeraLaltkd 31 
                  s+lg+++ A+e+ ++aL l ++
  MMETSP1325-20131115|2702_1  95 LSQLGRHQSALEHAQQALILLQE 117
                 48999999999999998855444 PP

  == domain 4    score: 2.6 bits;  conditional E-value: 0.18
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdp 32 
                 a++n ++ y+ l ++++ ++ y++  +++ ++
  MMETSP1325-20131115|2702_1 144 AYHNVGVEYEFLKKFDQSLQSYRK--GVEVSE 173
                 78999999999*************..988776 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.1   0.00035      0.25       3      37 ..      62     117 ..      60     122 .. 0.91
   2 !   10.9   0.0   0.00039      0.28       5      38 ..     142     175 ..     139     179 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00035
                 HHHHHHHHHHHHHHHTT.....................-HHHHHHHHHHHHHHHHH CS
  PF04212.13   3 skAlelikkAveaDeag.....................kyeeAlelYkeAlelLlq 37 
                  +Al++++kA++++++                      +++ Ale+ ++Al lL++
  MMETSP1325-20131115|2702_1  62 HAALQYLQKALKIENKLdqvdnpadtylntcavlsqlgRHQSALEHAQQALILLQE 117
                 689************999999999999********999***********9988875 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00039
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHH CS
  PF04212.13   5 AlelikkAveaDeagkyeeAlelYkeAlelLlqa 38 
                 A+ + + +ve +  +k+++ l++Y++++e+ +++
  MMETSP1325-20131115|2702_1 142 AIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERF 175
                 8899999*********************987766 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1      0.11        83       6      28 ..      12      34 ..      10      52 .. 0.83
   2 !   10.3   0.2    0.0012      0.85       7      30 ..      51      74 ..      44      83 .. 0.86
   3 ?    6.8   0.1     0.015        11       3      28 ..      87     112 ..      85     123 .. 0.81
   4 ?    0.1   0.0       2.2   1.6e+03      11      29 ..     152     170 ..     141     185 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.11
   PF13428.1  6 alarallalGdpdeAiallrral 28
                +la  +l+++d++  ++ll++a 
  MMETSP1325-20131115|2702_1 12 LLAMTYLQQEDFAMVLELLKKAE 34
                58999****************94 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.0012
   PF13428.1  7 larallalGdpdeAiallrralal 30
                la +++++G + +A+++l++al+ 
  MMETSP1325-20131115|2702_1 51 LACYYRRQGKLHAALQYLQKALKI 74
                7779*****************986 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.015
   PF13428.1   3 allalarallalGdpdeAiallrral 28 
                 ++l   ++l +lG+++ A++++++al
  MMETSP1325-20131115|2702_1  87 TYLNTCAVLSQLGRHQSALEHAQQAL 112
                 66777789999999999999999997 PP

  == domain 4    score: 0.1 bits;  conditional E-value: 2.2
   PF13428.1  11 llalGdpdeAiallrrala 29 
                 ++ l  +d+ ++ +r+ ++
  MMETSP1325-20131115|2702_1 152 YEFLKKFDQSLQSYRKGVE 170
                 6667889999999999887 PP

>> PF13429.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.4     5e-06    0.0036     119     178 ..      16      77 ..       9      84 .. 0.87
   2 ?    2.6   0.1     0.073        53     152     175 ..      91     114 ..      76     123 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 5e-06
   PF13429.1 119 llerakdykrieellasle..ekeaaeqsalfllaraellrqegqkkkAlrllrralalkpa 178
                 ++ +++d+  + ell+++e   +++  + a ++  +a ++r++g+  +Al+ l++al+ + +
  MMETSP1325-20131115|2702_1  16 TYLQQEDFAMVLELLKKAEilTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENK 77 
                 577899***********99555666889*****************************98765 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.073
   PF13429.1 152 raellrqegqkkkAlrllrralal 175
                   ++l+q g+++ Al+ +++al l
  MMETSP1325-20131115|2702_1  91 TCAVLSQLGRHQSALEHAQQALIL 114
                 456777888888888888888754 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       1.2   8.3e+02      36      56 ..      12      32 ..      11      42 .. 0.73
   2 !   18.3   1.2   3.3e-06    0.0024       3      58 ..      51     112 ..      49     122 .. 0.87
   3 ?   -1.2   0.0       4.6   3.3e+03       8      28 ..     153     178 ..     148     205 .. 0.72

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 1.2
   PF13432.1 36 llaeallrlgrldeAaallra 56
                lla+++l++ +++  ++ll++
  MMETSP1325-20131115|2702_1 12 LLAMTYLQQEDFAMVLELLKK 32
                688888888888766666555 PP

  == domain 2    score: 18.3 bits;  conditional E-value: 3.3e-06
   PF13432.1   3 lArallraGdydeAlaaleaalala......PeaaeallllaeallrlgrldeAaallraal 58 
                 lA  + r+G++ +Al++l++al+ +         a+ +l+   +l +lgr++ A++  ++al
  MMETSP1325-20131115|2702_1  51 LACYYRRQGKLHAALQYLQKALKIEnkldqvDNPADTYLNTCAVLSQLGRHQSALEHAQQAL 112
                 8999*********************8877665599********************5555554 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 4.6
   PF13432.1   8 lraGdydeAlaaleaalala.....P 28 
                   ++++d+ l+ +++ ++       P
  MMETSP1325-20131115|2702_1 153 EFLKKFDQSLQSYRKGVEVSerflgP 178
                 55677888888887766655454444 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   1.4     0.001      0.72      28      83 ..      12      70 ..       4      70 .. 0.80
   2 !   11.9   2.1   0.00023      0.17      29      80 ..      49     107 ..      33     111 .. 0.73
   3 !   11.6   1.5   0.00029      0.21       2      51 ..      58     114 ..      57     168 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.001
                HHHHHHHHHH---HHHHHHHHHC..TSHCHCBHHHHHHH.H.HHHH.HTT-HHHHCCCHHH CS
   PF12895.2 28 lyalAlclylngeykrAyellrk..leldssslgcryll.A.rcll.klgkydeAiavLek 83
                l+  A ++++++++   +ell+k     +  ++g ++ + +  c++  +gk++ A++ L+k
  MMETSP1325-20131115|2702_1 12 LL--AMTYLQQEDFAMVLELLKKaeILTERDNAGRAVTFnNlACYYrRQGKLHAALQYLQK 70
                56..99***************998644444668999999555666688999*999999986 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00023
                 HHHHHHHHH---HHHHHHHHHC.....TSHCH.CBHHHHHHH.HHHHHHTT-HHHHCCC CS
   PF12895.2  29 yalAlclylngeykrAyellrk.....lelds.sslgcryll.ArcllklgkydeAiav 80 
                  +lA  + ++g+ ++A+++l+k     ++ld   +++  yl    +l +lg+++ A+++
  MMETSP1325-20131115|2702_1  49 NNLACYYRRQGKLHAALQYLQKalkieNKLDQvDNPADTYLNtCAVLSQLGRHQSALEH 107
                 34788889999999999999999888877777666777777766788899999998876 PP

  == domain 3    score: 11.6 bits;  conditional E-value: 0.00029
                 TT-HHHHHHHHHHHCCC-ST....-HHHHCHHHHHHHHHH---HHHHHHHHHC...T CS
   PF12895.2   2 qhnyknAlflaekllaespk....dpedaylyalAlclylngeykrAyellrk...l 51 
                 q+  + Al +++k+l+ ++k    d+ ++ +++ + +l ++g++++A+e  ++   l
  MMETSP1325-20131115|2702_1  58 QGKLHAALQYLQKALKIENKldqvDNPADTYLNTCAVLSQLGRHQSALEHAQQaliL 114
                 678899************9986553345577779*************9999876541 PP

>> PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   0.00015      0.11     109     151 ..      36      78 ..      20     134 .. 0.65
   2 ?   -2.2   0.0       2.8     2e+03     124     153 ..     141     170 ..     126     185 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00015
   PF09986.4 109 lkkekkskkAklalrlAWlyrdledeekeklflkkAlelykea 151
                 l++ +++  A++  +lA++yr +++ +   ++l+kAl++ ++ 
  MMETSP1325-20131115|2702_1  36 LTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKL 78 
                 344455589***************************9874444 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 2.8
   PF09986.4 124 lAWlyrdledeekeklflkkAlelykeaye 153
                 lA  y + + e++  +   ++l++y++ +e
  MMETSP1325-20131115|2702_1 141 LAIAYHNVGVEYEFLKKFDQSLQSYRKGVE 170
                 555666666666666667777777776655 PP

>> PF10952.3  Protein of unknown function (DUF2753)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.3   0.00057      0.41      22      77 ..      17      72 ..       4     107 .. 0.73
   2 ?    0.9   0.0       0.5   3.6e+02      19      56 ..     103     148 ..      85     166 .. 0.63

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00057
   PF10952.3 22 lhyqlalaisqeldeseeeeledlltikvvschnladfwraagdseyelkylqlas 77
                   q  +a++ el +++e+  e   + + v+  nla ++r++g+ +  l+ylq a 
  MMETSP1325-20131115|2702_1 17 YLQQEDFAMVLELLKKAEILTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKAL 72
                34567899999998888888888888999***********************9874 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.5
   PF10952.3  19 asilhyqlalaisqe.l.......deseeeeledlltikvvschnl 56 
                  ++ h q+al + qe l        + +e+   d++++  ++ hn+
  MMETSP1325-20131115|2702_1 103 SALEHAQQALILLQEeLsrvlgpmADGNEAPKADRIAVLAIAYHNV 148
                 4444555555433321222222236777788888888888888887 PP

>> PF13507.1  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00019      0.14     164     234 ..      43     116 ..      11     129 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00019
   PF13507.1 164 Grfvf.eseevleeleangqvalrYvde..egepteeyplNPngSpeaiaGitspdGRvlglmphpervfravq 234
                 Gr+v  ++ +++ + + + ++al+Y ++  + e + +   NP + + +  ++ s+ GR+   + h +++   +q
  MMETSP1325-20131115|2702_1  43 GRAVTfNNLACYYRRQGKLHAALQYLQKalKIENKLDQVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQ 116
                 665432666677777778899*******555555666788*************************998876666 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.4     0.017        12      35      59 ..      51      75 ..      13      89 .. 0.66
   2 ?    6.9   2.3    0.0069         5       5      69 ..      55     139 ..      51     142 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.017
   PF13371.1 35 rGlllaqlgclaaAaedLeaflelc 59
                 +  + ++g l+aA++ L+ +l+ +
  MMETSP1325-20131115|2702_1 51 LACYYRRQGKLHAALQYLQKALKIE 75
                5666788999********9999554 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0069
   PF13371.1   5 ylreedferALavverllll......aPddpyerRDrGlllaqlgclaaAaedLeafl.....elcp.........dapdaelir 69 
                 y r+++  +AL++++  l +        +++  +     +l qlg+++ A+e  +++l     el++         +ap a++i+
  MMETSP1325-20131115|2702_1  55 YRRQGKLHAALQYLQKALKIenkldqVDNPADTYLNTCAVLSQLGRHQSALEHAQQALillqeELSRvlgpmadgnEAPKADRIA 139
                 688889999999999999995555443337778888999999**********999999775542222666677777888888876 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       1.3   9.1e+02       6      24 ..      12      30 ..      10      32 .. 0.85
   2 ?    0.8   0.0       1.2   8.3e+02       6      22 ..      50      66 ..      34      70 .. 0.86
   3 ?    7.4   0.1    0.0087       6.3       4      26 .]      88     110 ..      85     110 .. 0.88
   4 ?   -1.6   0.0         7     5e+03       6      15 ..     140     149 ..     139     149 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 1.3
                --HHHHHH-------HHHH CS
   PF07721.9  6 aLArallalGdldeArall 24
                +LA+++l++ d++  ++ll
  MMETSP1325-20131115|2702_1 12 LLAMTYLQQEDFAMVLELL 30
                69*******9999877776 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 1.2
                --HHHHHH-------HH CS
   PF07721.9  6 aLArallalGdldeAra 22
                +LA  + ++G l +A++
  MMETSP1325-20131115|2702_1 50 NLACYYRRQGKLHAALQ 66
                56667899999999986 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0087
                 H---HHHHHH-------HHHHHT CS
   PF07721.9   4 llaLArallalGdldeAraller 26 
                 +l+ + +l +lG++  A++++++
  MMETSP1325-20131115|2702_1  88 YLNTCAVLSQLGRHQSALEHAQQ 110
                 6788999*************986 PP

  == domain 4    score: -1.6 bits;  conditional E-value: 7
                 --HHHHHH-- CS
   PF07721.9   6 aLArallalG 15 
                 +LA a++  G
  MMETSP1325-20131115|2702_1 140 VLAIAYHNVG 149
                 79***99765 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       3.4   2.4e+03       6      16 ..      13      23 ..      12      45 .. 0.74
   2 ?    9.4   0.2    0.0018       1.3       9      28 ..      53      73 ..      50      74 .. 0.85
   3 ?   -0.5   0.0       2.8     2e+03      11      26 ..      96     111 ..      86     113 .. 0.77
   4 ?    0.8   0.0       1.1   7.8e+02       5      25 ..     147     167 ..     142     167 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 3.4
                HHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdt 16
                la+ y+++ d+
  MMETSP1325-20131115|2702_1 13 LAMTYLQQEDF 23
                78888887555 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.0018
                HHHH.HHHHHHHHHHHHHHHH CS
   PF13174.1  9 syyk.lgdtdeAlealerlik 28
                +yy+ +g+  +Al++l++ +k
  MMETSP1325-20131115|2702_1 53 CYYRrQGKLHAALQYLQKALK 73
                66666*************987 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 2.8
                 HHHHHHHHHHHHHHHH CS
   PF13174.1  11 yklgdtdeAlealerl 26 
                  +lg+++ Ale  ++ 
  MMETSP1325-20131115|2702_1  96 SQLGRHQSALEHAQQA 111
                 4568999999999986 PP

  == domain 4    score: 0.8 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealer 25 
                 + +  y+ l+++d++l+ +++
  MMETSP1325-20131115|2702_1 147 NVGVEYEFLKKFDQSLQSYRK 167
                 55555666899*****99986 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       2.8     2e+03      17      30 ..      11      24 ..      10      28 .. 0.83
   2 ?    9.9   0.1    0.0011      0.83      12      34 .]      44      66 ..      36      66 .. 0.88
   3 ?   -1.3   0.1       4.4   3.2e+03       3      10 ..      69      76 ..      67     106 .. 0.46
   4 ?   -0.1   0.0       1.8   1.3e+03      13      34 .]     142     163 ..     141     163 .. 0.77

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 2.8
   PF13431.1 17 nnLAelllnnGdle 30
                n LA ++l + d++
  MMETSP1325-20131115|2702_1 11 NLLAMTYLQQEDFA 24
                679*****999876 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0011
   PF13431.1 12 nadaynnLAelllnnGdleeAeq 34
                 a+ +nnLA ++ ++G+l  A+q
  MMETSP1325-20131115|2702_1 44 RAVTFNNLACYYRRQGKLHAALQ 66
                68999*************99987 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 4.4
   PF13431.1  3 ekaleldP 10
                +kal+++ 
  MMETSP1325-20131115|2702_1 69 QKALKIEN 76
                56665532 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 1.8
   PF13431.1  13 adaynnLAelllnnGdleeAeq 34 
                 a ay+n ++ +  ++++++++q
  MMETSP1325-20131115|2702_1 142 AIAYHNVGVEYEFLKKFDQSLQ 163
                 6789998888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.65u 0.33s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1225.31
//
Query:       MMETSP1325-20131115|2707_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-24   84.5   0.0    7.3e-24   84.3   0.0    1.1  1  PF01263.15 Aldose 1-epimerase


Domain annotation for each model (and alignments):
>> PF01263.15  Aldose 1-epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   0.0   5.3e-28   7.3e-24       2     148 ..      63     196 ..      62     200 .] 0.92

  Alignments for each domain:
  == domain 1    score: 84.3 bits;  conditional E-value: 5.3e-28
                 EEEEETTTEEEEEEET---EEEEEEETT.SCEBSB---CSHHHHHHSCG-HHEETSC-SEEEGGEEE----EEECCECBT..TTEEETTBGGGSB-EEEEEEE....CTEEEEEEEEEECTT.HC.STS-EEEEEEEEEETTEEEEEEEEEEESC CS
  PF01263.15   2 litlkngaglsakislyGAtllslkvpdkeqrevllgsddaeeylkdayfGatlgrvanRianGeFeldGkpyqlpknee..gknplHGgargrkWeveekke....ddgvtvslvlkpdge.eg.fpgdlevrvtytLnednelkieyeatndg 148
                 +++l++  g +++++l+GAt++s+ +p+  ++e+l+ s+            ++ g++a+R   G     G+p+ +p++++  + +p HG+ar   W+v++k++    d +v+v l+l+++ e ++ +p+++e++++++L++++ l   +++ nd+
  MMETSP1325-20131115|2707_1  63 KLRLTHSSGSTCEVYLFGATVTSYCTPQ--GKEILFVSER----------SQFNGKKAIR---G-----GVPIVFPQFGQpdKAMPSHGFARIAHWSVDTKQSaiqpDRSVQVVLTLRDSPEtYKmWPHEFELEYRISLTGRS-LQTALTVLNDK 196
                 6789************************..78*******9..........6*********...8.....************************************998888888888666665559***************99.99999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.31s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 1089.25
//
Query:       MMETSP1325-20131115|2708_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-08   31.8   0.4    0.00024   20.5   0.0    2.6  2  PF13414.1  TPR repeat
    0.00097   18.8   0.5     0.0029   17.3   0.1    1.9  2  PF04212.13 MIT (microtubule interacting and transport) domain
     0.0033   16.9   0.2      0.052   13.2   0.0    2.5  3  PF13176.1  Tetratricopeptide repeat
     0.0046   16.7   0.7      0.009   15.8   0.1    1.8  2  PF13424.1  Tetratricopeptide repeat
     0.0067   16.1   1.8      0.036   13.8   0.1    2.8  3  PF07719.12 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.052   13.0   1.9      0.081   12.4   0.1    2.3  3  PF00515.23 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   1.1e-07   0.00024      13      54 ..       4      49 ..       2      54 .. 0.82
   2 !    8.9   0.0   0.00043      0.98      29      61 ..      58      88 ..      56     115 .. 0.74

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 1.1e-07
   PF13414.1 13 lfkegdydeAieayekAleld....pnnaelyynlAlaylklgkdy 54
                + ++++y+eAi+ y+kA+++     + + ++ + +Ala++++ +++
  MMETSP1325-20131115|2708_1  4 HVEAKRYQEAIAVYTKAIDMLelagKPDVQIVSMRALAHQQKEEWW 49
                6789**************974333445899***********98876 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00043
   PF13414.1 29 AleldpnnaelyynlAlaylklgkdyeeAledy 61
                ++++dp+ +  yy +A+a +k+    ++ ++++
  MMETSP1325-20131115|2708_1 58 CMQIDPDWWTGYYVRAHAIMKML-A-DKTIREA 88
                689******************96.2.3333333 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   1.3e-06    0.0029      17      59 ..       6      49 ..       5      54 .. 0.76
   2 ?   -1.1   0.0      0.69   1.6e+03       5      13 ..      97     105 ..      78     123 .. 0.66

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.3e-06
                HTT-HHHHHHHHHHHHHHHHHHHHHC.TTHHCHHHHHHHHHHHH CS
  PF04212.13 17 eagkyeeAlelYkeAlelLlqalkye.pnperrealrqkieeyl 59
                ea++y+eA+  Y++A++ L+ a k + +  + r + +q+ ee+ 
  MMETSP1325-20131115|2708_1  6 EAKRYQEAIAVYTKAIDMLELAGKPDvQIVSMRALAHQQKEEWW 49
                6899****************998877433444444777777775 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.69
                 HHHHHHHHH CS
  PF04212.13   5 AlelikkAv 13 
                 A++ +++A+
  MMETSP1325-20131115|2708_1  97 AVDEMRQAI 105
                 333333333 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   2.3e-05     0.052       7      29 ..       2      22 ..       1      35 [. 0.80
   2 ?   -3.3   0.0       4.2   9.6e+03       7      15 ..      40      48 ..      38      50 .. 0.69
   3 ?    1.0   0.0      0.18   4.1e+02      14      32 ..     100     119 ..      96     123 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.3e-05
   PF13176.1  7 rlysrlgdyekAielyeraLalt 29
                +++++  +y++Ai +y++  a++
  MMETSP1325-20131115|2708_1  2 DAHVEAKRYQEAIAVYTK--AID 22
                6899999***********..443 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 4.2
   PF13176.1  7 rlysrlgdy 15
                 ++++  ++
  MMETSP1325-20131115|2708_1 40 LAHQQKEEW 48
                567777776 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.18
   PF13176.1  14 dyekAielyeraL.altkdp 32 
                 ++++Ai++ +++L   t  p
  MMETSP1325-20131115|2708_1 100 EMRQAIDAMKACLkCSTVPP 119
                 7899***9999885554554 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1     4e-06     0.009      15      39 ..       4      28 ..       2      47 .. 0.72
   2 ?   -2.4   0.0       1.8   4.1e+03      63      77 ..      95     109 ..      86     110 .. 0.68

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4e-06
   PF13424.1 15 lrrlgdydeAlelyekalellrelg 39
                + + ++y+eA++ y ka+++l+++g
  MMETSP1325-20131115|2708_1  4 HVEAKRYQEAIAVYTKAIDMLELAG 28
                5577899999999999999998888 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 1.8
   PF13424.1  63 deAleylekAleiae 77 
                 ++A++  ++A+++ +
  MMETSP1325-20131115|2708_1  95 SAAVDEMRQAIDAMK 109
                 457777777777655 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.1   1.6e-05     0.036      10      29 ..       3      22 ..       2      25 .. 0.89
   2 ?   -2.3   0.0       2.3   5.3e+03       7      15 ..      38      46 ..      36      48 .. 0.63
   3 ?   -0.1   0.0      0.45     1e+03      18      29 ..     102     113 ..      96     115 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.6e-05
                HHHHTT-HHHHHHHHHHHHH CS
  PF07719.12 10 ayyklgdyeeAleafekAle 29
                a+ ++++y+eA++ + kA+ 
  MMETSP1325-20131115|2708_1  3 AHVEAKRYQEAIAVYTKAID 22
                78899*************96 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 2.3
                HHHHHHHTT CS
  PF07719.12  7 lGlayyklg 15
                ++la+ ++ 
  MMETSP1325-20131115|2708_1 38 RALAHQQKE 46
                677776665 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.45
                 HHHHHHHHHHHH CS
  PF07719.12  18 eeAleafekAle 29 
                  +A++a++ +l+
  MMETSP1325-20131115|2708_1 102 RQAIDAMKACLK 113
                 468888887776 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   3.5e-05     0.081      13      29 ..       6      22 ..       2      25 .. 0.86
   2 ?   -2.9   0.0       2.5   5.7e+03       7      14 ..      38      45 ..      37      48 .. 0.60
   3 ?   -2.6   0.0         2   4.5e+03      19      24 ..     106     111 ..     100     114 .. 0.51

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.5e-05
                HTT-HHHHHHHHHHHHH CS
  PF00515.23 13 klgkydeAleyyekALe 29
                + ++y+eA++ y kA+ 
  MMETSP1325-20131115|2708_1  6 EAKRYQEAIAVYTKAID 22
                679************97 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 2.5
                HHHHHHHT CS
  PF00515.23  7 lGnaylkl 14
                +++a++++
  MMETSP1325-20131115|2708_1 38 RALAHQQK 45
                56666665 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 2
                 HHHHHH CS
  PF00515.23  19 eAleyy 24 
                 +A +++
  MMETSP1325-20131115|2708_1 106 DAMKAC 111
                 344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       744  (0.0544178); expected 273.4 (0.02)
Passed bias filter:                      618  (0.0452019); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 585.26
//
Query:       MMETSP1325-20131115|2709_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|2710_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.008   14.3   3.8     0.0097   14.0   2.6    1.0  1  PF06011.7 Transient receptor potential (TRP) ion channel


Domain annotation for each model (and alignments):
>> PF06011.7  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   2.6   7.1e-07    0.0097     430     514 ..      12      96 ..       6      99 .. 0.95

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 7.1e-07
   PF06011.7 430 kyGflYnqyradavwfvivdlaylfvrslfIgllqssGiaQvvallviEllylilllwirPymdkrsnalniiisvvrlltalls 514
                  +G+l  + r++  +fv++  + +f+ ++ ++ l  ++ +Q+  ++ + ll l+  ++  Py     n+ ++++sv+r++ ++ +
  MMETSP1325-20131115|2710_1  12 VWGMLFMKLRPEQRYFVVIYSLRQFLEAVLLASLGLYPDVQTWSIVGLLLLWLCYAAYGLPYLLLGLNMKEVLFSVIRVVAMFVV 96 
                 6***************************************************************999************998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       547  (0.0400088); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|2704_1  [L=317]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1862  (0.136191); expected 273.4 (0.02)
Passed bias filter:                      566  (0.0413985); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.94u 0.36s 00:00:01.29 Elapsed: 00:00:00.59
# Mc/sec: 1287.53
//
Query:       MMETSP1325-20131115|2711_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|2714_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.082   12.7   0.0       0.17   11.6   0.0    1.5  2  PF07606.6 Protein of unknown function (DUF1569)


Domain annotation for each model (and alignments):
>> PF07606.6  Protein of unknown function (DUF1569)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.2e-05      0.17      50     109 ..       1      60 [.       1      68 [. 0.91
   2 ?   -1.7   0.0      0.15   2.1e+03      92     115 ..      74      97 ..      59      99 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.2e-05
   PF07606.6  50 vdGypeekpalfkrtvgklaflpfllkgkmshkldepipkslvpeadlddaealerlaes 109
                 ++G+ e  p+l + t     ++ +   gk s+k++ pi +s+++  d dd +a+ ++a s
  MMETSP1325-20131115|2714_1   1 MSGFGEVDPRLVETTSCPTNIACIKYWGKASKKMNTPINSSVSVTLDQDDLRAVTTVATS 60 
                 89*******************************************999999888877655 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.15
   PF07606.6  92 vpeadlddaealerlaesierfka 115
                 ++++d +++e ++r++  +++++a
  MMETSP1325-20131115|2714_1  74 ELSMDDSKNEHANRFKTCVAALRA 97 
                 455566667777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 560.97
//
Query:       MMETSP1325-20131115|2717_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|2713_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|2715_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   22.1   0.0    0.00015   21.6   0.0    1.4  1  PF03372.18 Endonuclease/Exonuclease/phosphatase family
     0.0026   17.8   0.3     0.0065   16.6   0.2    1.6  1  PF14354.1  Restriction alleviation protein Lar
     0.0034   17.1   0.2     0.0055   16.4   0.1    1.3  1  PF09526.5  Probable metal-binding protein (DUF2387)
     0.0055   16.3   1.0     0.0096   15.6   0.7    1.3  1  PF12760.2  Transposase zinc-ribbon domain
  ------ inclusion threshold ------
      0.015   14.3   1.0      0.035   13.1   0.7    1.6  1  PF13248.1  zinc-ribbon domain
      0.015   14.8   0.0      0.025   14.1   0.0    1.2  1  PF05129.8  Transcription elongation factor Elf1 like
      0.016   14.8   0.1      0.022   14.3   0.1    1.3  1  PF04216.7  Protein involved in formate dehydrogenase formation
      0.033   13.3   2.1      0.064   12.4   1.5    1.4  1  PF08271.7  TFIIB zinc-binding
      0.054   13.2   0.6        0.1   12.3   0.4    1.4  1  PF12773.2  Double zinc ribbon
      0.089   12.3   1.8       0.16   11.5   0.9    1.7  2  PF07282.6  Putative transposase DNA-binding domain
       0.44   10.4   2.2        1.6    8.6   1.5    1.8  2  PF09723.5  Zinc ribbon domain
       0.61    9.6   4.0        2.1    7.9   2.9    1.9  1  PF04606.7  Ogr/Delta-like zinc finger


Domain annotation for each model (and alignments):
>> PF03372.18  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.3e-07   0.00015       2      62 ..     111     177 ..     110     247 .. 0.76

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.3e-07
                 EEEECE.............CGTHCHHHHHHHTCG-SEEEEECC-TCHHHHHHCHHCTTT-EEEE--- CS
  PF03372.18   2 twNvlg.....wnarsdr.akkldqladllqsedpDvllLQEvdedplsellatglasglglagdgk 62 
                 +wN+++      n+r  r + + +++a+ll+ +d+D+++LQE+   p++    +  a++++ + d++
  MMETSP1325-20131115|2715_1 111 QWNINAmqfrtANERKVRvGTRGAAMASLLRGVDADIIVLQEAGCLPNRLGVVNHAARNGDGDSDDD 177
                 8*****6666644444446444445******************977666666666666666444444 PP

>> PF14354.1  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.2   5.7e-06    0.0065       5      45 ..      69     100 ..      64     116 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 5.7e-06
   PF14354.1   5 pCPfCGsaevleedeegldegdvyyvsChdCgadesvsead 45 
                  CP CG  +v  +++ g d     y++C++Cg       ++
  MMETSP1325-20131115|2715_1  69 VCPACGTRNVIRTTTQGAD----GYMHCERCGD-----GTS 100
                 5*********999999876....8*******87.....333 PP

>> PF09526.5  Probable metal-binding protein (DUF2387)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   4.8e-06    0.0055      10      48 ..      69     106 ..      68     130 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 4.8e-06
   PF09526.5  10 vCPkCsemDkirlveedevevveCveCgyteerkdeeev 48 
                 vCP+C +   ir +++  + ++ C +Cg   +++++ +v
  MMETSP1325-20131115|2715_1  69 VCPACGTRNVIRTTTQGADGYMHCERCGDGTSMTPA-PV 106
                 8***************************99999887.43 PP

>> PF12760.2  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.7   8.4e-06    0.0096      19      44 ..      68      96 ..      55      97 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 8.4e-06
   PF12760.2 19 fvCphCgsreayrikt...rglyqCkeCr 44
                +vCp+Cg r + r +t    g+  C +C+
  MMETSP1325-20131115|2715_1 68 QVCPACGTRNVIRTTTqgaDGYMHCERCG 96
                89*******99999999***********7 PP

>> PF13248.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.7   3.1e-05     0.035       4      23 ..      69      96 ..      67      98 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.1e-05
   PF13248.1  4 tCPnCGa.vl.......evdakFCpnCG 23
                +CP+CG+ ++        +++  C  CG
  MMETSP1325-20131115|2715_1 69 VCPACGTrNVirtttqgADGYMHCERCG 96
                7******8868999888888*******9 PP

>> PF05129.8  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.2e-05     0.025      14      59 ..      59     102 ..      54     111 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.2e-05
                 ------SS----TTT--SS-EEEEEETTTTE-EEEESSS--EE--- CS
   PF05129.8  14 kkkeklpkvFeCpfCnhkksvsvkldkktkiaklkCkvCglsfete 59 
                 +++ + p+v  Cp C++ +++  + + +   + ++C+ Cg  ++++
  MMETSP1325-20131115|2715_1  59 RNVAPRPSVQVCPACGTRNVIRTTTQGA--DGYMHCERCGDGTSMT 102
                 55666677788*****988888877777..9*********999887 PP

>> PF04216.7  Protein involved in formate dehydrogenase formation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   1.9e-05     0.022     168     207 ..      60      96 ..       4     101 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.9e-05
   PF04216.7 168 laeegeqkglCPvCGsaPvasviregekqGlRylhCslCe 207
                 +  ++ + ++CP+CG + v+ + ++g++ G  y+hC  C+
  MMETSP1325-20131115|2715_1  60 NVAPRPSVQVCPACGTRNVIRTTTQGAD-G--YMHCERCG 96 
                 334444569********99888887773.6..*******7 PP

>> PF08271.7  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.5   5.6e-05     0.064       2      26 ..      69      96 ..      68      98 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.6e-05
                E-SSS--EEHHB-...S----BB-SSS- CS
   PF08271.7  2 kCPnCgstelvfD...aerGelvCtdCG 26
                +CP Cg++++++     + G + C++CG
  MMETSP1325-20131115|2715_1 69 VCPACGTRNVIRTttqGADGYMHCERCG 96
                8********6555344788999*****9 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   8.8e-05       0.1      10      38 ..      65      98 ..      60     104 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.8e-05
   PF12773.2 10 sgarfCpqCgaklk......eataeevlCpsCges 38
                ++ ++Cp+Cg++        +a+   + C++Cg  
  MMETSP1325-20131115|2715_1 65 PSVQVCPACGTRNVirtttqGADG-YMHCERCGDG 98
                56799*******999999965555.899****975 PP

>> PF07282.6  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       3.5     4e+03      58      64 ..      48      54 ..      44      59 .. 0.77
   2 ?   11.5   0.9   0.00014      0.16      22      53 ..      61      96 ..      53      98 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 3.5
   PF07282.6 58 rDvnAai 64
                rD+n+a 
  MMETSP1325-20131115|2715_1 48 RDINGAH 54
                9***985 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00014
   PF07282.6 22 vnpayTSktCsvCgsknke....alsgrlfkCpnCg 53
                v p+ + + C+ Cg +n      + ++  ++C++Cg
  MMETSP1325-20131115|2715_1 61 VAPRPSVQVCPACGTRNVIrtttQGADGYMHCERCG 96
                7788899**********999988889999******9 PP

>> PF09723.5  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1    0.0023       2.6      24      39 ..      65      80 ..      56      83 .. 0.78
   2 ?    8.6   1.5    0.0014       1.6       8      34 ..      70      97 ..      68     102 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0023
   PF09723.5 24 ddeteCPeCgsekvrr 39
                ++ ++CP+Cg+ +v r
  MMETSP1325-20131115|2715_1 65 PSVQVCPACGTRNVIR 80
                67899*****987766 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0014
   PF09723.5  8 CekCgkefevlqsisd..ddeteCPeCgs 34
                C++Cg + +v+++ ++  d    C +Cg 
  MMETSP1325-20131115|2715_1 70 CPACG-TRNVIRTTTQgaDGYMHCERCGD 97
                99***.999999999999999******97 PP

>> PF04606.7  Ogr/Delta-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   2.9    0.0018       2.1       2      16 ..      70      84 ..      69      96 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0018
   PF04606.7  2 CPeCgakarirtsrn 16
                CP Cg + +irt+++
  MMETSP1325-20131115|2715_1 70 CPACGTRNVIRTTTQ 84
                *************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       546  (0.0399356); expected 273.4 (0.02)
Passed bias filter:                      433  (0.0316706); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.60
# Mc/sec: 1010.46
//
Query:       MMETSP1325-20131115|2720_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 199.70
//
Query:       MMETSP1325-20131115|2719_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 940.11
//
Query:       MMETSP1325-20131115|2721_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 298.49
//
Query:       MMETSP1325-20131115|2723_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-30  103.9   0.1    9.5e-30  103.7   0.1    1.1  1  PF07970.7 Endoplasmic reticulum vesicle transporter


Domain annotation for each model (and alignments):
>> PF07970.7  Endoplasmic reticulum vesicle transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.7   0.1   6.9e-34   9.5e-30      44     222 .]      40     219 ..      15     219 .. 0.85

  Alignments for each domain:
  == domain 1    score: 103.7 bits;  conditional E-value: 6.9e-34
   PF07970.7  44 eklkekknekegCrvkgklevnkvaGnfhiapgrsfkekgvhvhdlsllekeeklnlsHtinklsfGeeipkgk.............npLdgvkkvqqkdkkelkysYflkvvptryeslskln.a.etnqysvtsherkveggskggvPGvffnYdisplkvinkeerksflhfltnlcaiiGGvfavasliD 222
                 +++++++ ++ gC ++g+l vn+v+Gnfh+ +++       ++h+l+        nlsH++n+lsfG+ +++ +             +pLdg    ++ ++     + f kvv+t ye +  l+ + +   y++ ++++ ++  +   vP   f+Yd+sp+ v+++ + + ++ flt+lcaiiGG f+v++l+D
  MMETSP1325-20131115|2723_1  40 ARIEAANVDHPGCMISGHLLVNRVPGNFHLEARS-------KSHNLNAA----MTNLSHIVNHLSFGQPLNQIQkrkmkkfpeytttSPLDGNVY-VN-KDFHQAHHHFSKVVSTHYEVDGMLSrKnRIMGYQMITQNQIMHYDE-MAVPEAKFSYDLSPMAVVVTSKGRRWYDFLTSLCAIIGGTFTVVGLLD 219
                 56777788899********************999.......33455555....459***********77555445567888899999*****998.42.33345566789*********998888569999****9999999888.**********************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 1055.32
//
Query:       MMETSP1325-20131115|2725_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 341.70
//
Query:       MMETSP1325-20131115|2726_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.56
# Mc/sec: 175.45
//
Query:       MMETSP1325-20131115|2728_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.7   0.0      0.041   13.8   0.0    1.9  2  PF02875.16 Mur ligase family, glutamate ligase domain


Domain annotation for each model (and alignments):
>> PF02875.16  Mur ligase family, glutamate ligase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0     3e-06     0.041      11      84 ..      30     100 ..       4     107 .. 0.74
   2 ?   -0.8   0.0       0.1   1.4e+03      26      49 ..     131     155 ..     128     157 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3e-06
                 --TTEEEE-T--SCCCHHHHHHHHHHC.STS-EEEEE-E-SC.HHCCHHTCHCHHHHHTTHSCEEEEE-SBTTT CS
  PF02875.16  11 angvtvidDyahnpdslsaalkalreiapdkrlilvfgpggelgertrefhdefgrlasaladslvvlgdypra 84 
                 a++++v+ D +hn  +l+++++ l+ ++p + l +v+g  ++  ++ + ++d++ ++  a+ + ++v    pra
  MMETSP1325-20131115|2728_1  30 AGALKVLLDVGHNLPALEQLFAKLERTFPGRPLRVVAGFSRD--KDLAGCLDLITKA-GAVRAAHLVQASHPRA 100
                 67899*********************************8777..3334444444444.4446666666666665 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.1
                 CHHHHHHHHHHC.S.TS-EEEEE-E CS
  PF02875.16  26 slsaalkalreiap.dkrlilvfgp 49 
                 ++ aal+a  e+ p d+++++v+g+
  MMETSP1325-20131115|2728_1 131 GVHAALRASSESPPsDEEIVVVCGS 155
                 5678899988886688899999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 935.50
//
Query:       MMETSP1325-20131115|2729_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.07   13.0   2.8       0.14   12.1   2.0    1.4  1  PF10190.4 Putative transmembrane protein 170
       0.19   10.9   2.1        1.4    8.1   0.7    2.1  2  PF13567.1 Domain of unknown function (DUF4131)
        6.9    6.2   7.7        0.5    9.9   1.7    1.6  2  PF07314.6 Protein of unknown function (DUF1461)


Domain annotation for each model (and alignments):
>> PF10190.4  Putative transmembrane protein 170
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.0     3e-05      0.14      14      97 ..      31     116 ..      25     121 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3e-05
   PF10190.4  14 Walfssllvhiaaa..llalvtlrkhksgrllsivilvmGvlapltggvitsaavagvyraagkemaplealvyGvgqtllvlvls 97 
                  a+  + +v i+aa  +l  +tl  h  + ++   ++++G + ++   + t +a+ + y  a++e+ ++      ++ ++l++ l+
  MMETSP1325-20131115|2729_1  31 RAMTRACFVGICAAflVLLWMTLFSHTATPFMCASLILLGNVLAIPQPISTEIALDVTYGQADVEVESVVVCLQMITTSMLTAFLG 116
                 5777788999998722445689********************************************99999988888888888876 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.7   0.00031       1.4      16      85 ..      38     101 ..      30     126 .. 0.67
   2 ?    1.9   0.0     0.026   1.2e+02       2      33 ..     134     167 ..     133     186 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00031
   PF13567.1  16 llllalllalllllllflkrrkrrrlllllglllllaglylllrapqpssndlsrlles.gkevtveGvve 85 
                 ++ +++++++ll+  lf    ++    +  ++++ l++l+  l+ pqp s+++   +++ + +v+ve vv+
  MMETSP1325-20131115|2729_1  38 FVGICAAFLVLLWMTLF----SH---TATPFMCASLILLGNVLAIPQPISTEIALDVTYgQADVEVESVVV 101
                 33334444444444443....33...444445555556667778888888888888888888888887665 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.026
   PF13567.1   2 lGilla..alaslplgllllalllalllllllfl 33 
                 +Gi +a    +++p+ + +l++l+ ++ ++++f 
  MMETSP1325-20131115|2729_1 134 IGISAAdtWDYTFPYLVTFLVVLVGFVPYFVFFT 167
                 5888886555666666666666666666666664 PP

>> PF07314.6  Protein of unknown function (DUF1461)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.2      0.47   2.1e+03     107     116 ..      45      54 ..      28      75 .. 0.49
   2 ?    9.9   1.7   0.00011       0.5      88     159 ..      95     172 ..      94     175 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.47
   PF07314.6 107 llllflklll 116
                 +l+l+++ l+
  MMETSP1325-20131115|2729_1  45 FLVLLWMTLF 54 
                 2222222222 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00011
   PF07314.6  88 dVknLfelaqlvllillllllllflklllkkkklkllkktlilll.....llplvillll.lldFdkfFtlFHkifFn 159
                 +V  ++   q++++++l  +l +f+    + ++l+l+ +  i ++     ++p ++++l+ l++F  +F+ F ++ F+
  MMETSP1325-20131115|2729_1  95 EVESVVVCLQMITTSMLTAFLGYFVSAEAEYTSLSLMYNIGISAAdtwdyTFPYLVTFLVvLVGFVPYFVFFTEVHFK 172
                 6778888888888777777777777777666666666544444449999988888887777**************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       739  (0.0540521); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|2731_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.23u 0.46s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 379.42
//
Query:       MMETSP1325-20131115|2730_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   13.7   0.0      0.079   13.0   0.0    1.4  1  PF08544.8 GHMP kinases C terminal


Domain annotation for each model (and alignments):
>> PF08544.8  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.8e-06     0.079      37      69 ..      78     108 ..      58     114 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 5.8e-06
   PF08544.8  37 rellealeelGalgaklsGaGgGptvfalfkdk 69 
                  + l +lee G+  ++ls+a  G+t+++l+++ 
  MMETSP1325-20131115|2730_1  78 VASLNELEEKGVELSALSQA--GGTIAGLTRTL 108
                 677999**************..*******9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 739.30
//
Query:       MMETSP1325-20131115|2732_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-31  108.8   0.0      3e-31  108.6   0.0    1.0  1  PF04752.7 ChaC-like protein


Domain annotation for each model (and alignments):
>> PF04752.7  ChaC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.6   0.0   2.2e-35     3e-31      22     176 ..       3     168 ..       1     169 [. 0.92

  Alignments for each domain:
  == domain 1    score: 108.6 bits;  conditional E-value: 2.2e-35
   PF04752.7  22 lafikgykRrfwlastdhRGtpekPgrvltLeeaee.............gicwGvayrvpgeeaeevleyLeeREktnGyekeevevyleeddkskpavlevlvyvatpkneeylgpa.pleeiAkqiatakGpsGsnaeYLfklekaleklg..eiedeylieLaeeVrk 176
                 ++ ++g+ R f ++stdhRGtpekPg+v+t+  +++             ++++G+ y++++++ae vl+ L+ REk +Gy++  v v  e  +  +p+  ++l y atp+n+++     + +++A++ia+a+GpsG+naeYL +l + l++l     e++ l++L++ V++
  MMETSP1325-20131115|2732_1   3 PCRVRGWGRFFAQRSTDHRGTPEKPGLVATMLSDSQleaiglrregappSVTIGMGYEIAAANAEGVLADLDFREK-GGYTRDVVMV--EPLSGGAPM--KALLYSATPDNPNFDRTMlDPDAAAAVIASAVGPSGQNAEYLSNLTQWLRSLDvdDLEEDGLMDLEARVNE 168
                 6789*****************************9889**************************************8.8999888888..445577777..**************87654999999***************************966699*********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.51s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 846.06
//
Query:       MMETSP1325-20131115|2727_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.45s 00:00:00.95 Elapsed: 00:00:00.50
# Mc/sec: 1500.12
//
Query:       MMETSP1325-20131115|2734_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 524.49
//
Query:       MMETSP1325-20131115|2734_2  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|2735_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0001   21.9   0.1    0.00016   21.3   0.1    1.3  1  PF13374.1  Tetratricopeptide repeat
     0.0012   18.6   0.1     0.0012   18.6   0.1    1.2  1  PF13424.1  Tetratricopeptide repeat
     0.0092   15.7   0.1      0.016   14.9   0.1    1.5  1  PF07719.12 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.084   12.9   0.0       0.11   12.4   0.0    1.3  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
        0.1   13.1   0.0       0.15   12.6   0.0    1.4  1  PF13432.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   5.7e-08   0.00016       2      39 ..      17      54 ..      16      57 .. 0.92

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 5.7e-08
   PF13374.1  2 aaalnnLAlalrargryeeAlaleeealairrrllGdd 39
                a+a+   +  l ++g+ ee la +e ala++r+llG+d
  MMETSP1325-20131115|2735_1 17 ADAMQWKGECLVRQGKVEEGLACLEVALATQRALLGED 54
                778888899999*************************9 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   4.4e-07    0.0012       4      43 ..      16      56 ..       3      60 .] 0.71

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 4.4e-07
   PF13424.1  4 latilnnlalvlrrlgdydeAlelyekalel.lrelgddhp 43
                +a+++   +++l r+g+ +e l+++e al+  +++lg+d +
  MMETSP1325-20131115|2735_1 16 MADAMQWKGECLVRQGKVEEGLACLEVALATqRALLGEDQL 56
                46666667777777777777777777777776667777766 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1     6e-06     0.016       1      29 [.      17      45 ..      17      50 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 6e-06
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  1 aealynlGlayyklgdyeeAleafekAle 29
                a+a  + G+++ ++g+ ee l+++e Al+
  MMETSP1325-20131115|2735_1 17 ADAMQWKGECLVRQGKVEEGLACLEVALA 45
                688999*******************9997 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.1e-05      0.11      64      82 ..      23      41 ..       2      43 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.1e-05
                HHHHHHHTT-HHHHCCCHH CS
   PF12895.2 64 lArcllklgkydeAiavLe 82
                +++cl+ +gk++e++a+Le
  MMETSP1325-20131115|2735_1 23 KGECLVRQGKVEEGLACLE 41
                38999**********9998 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.3e-05      0.15      31      59 ..      17      45 ..       6      58 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.3e-05
   PF13432.1 31 aeallllaeallrlgrldeAaallraala 59
                a+a+++ +e+l r+g+++e +a l+ ala
  MMETSP1325-20131115|2735_1 17 ADAMQWKGECLVRQGKVEEGLACLEVALA 45
                89******************999988884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 261.42
//
Query:       MMETSP1325-20131115|2736_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        63  (0.00460796); expected 273.4 (0.02)
Passed bias filter:                       57  (0.0041691); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|2737_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.24    9.2   3.9       0.24    9.2   2.7    1.0  1  PF03814.10 Potassium-transporting ATPase A subunit
       0.31   10.3   2.5       0.31   10.3   1.7    1.1  1  PF00814.20 Glycoprotease family
        1.8    8.1   4.4        2.4    7.7   3.0    1.3  1  PF11857.3  Domain of unknown function (DUF3377)


Domain annotation for each model (and alignments):
>> PF03814.10  Potassium-transporting ATPase A subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.7   5.3e-05      0.24     136     190 ..      16      70 ..       5      72 .] 0.91

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 5.3e-05
  PF03814.10 136 saatGlavaiAliRgltrketkklGNfyvdlvrlilrvllPlslvlaillvaqGv 190
                 +aa+  av + ++R+l+   t +lG  ++   r+i + +lP+ lvl ++ ++  v
  MMETSP1325-20131115|2737_1  16 AAAVAWAVGLGMVRALRVPVTIALGVAHAVSARAISWTVLPVHLVLVVVSLVLTV 70 
                 69999***************************************99998776655 PP

>> PF00814.20  Glycoprotease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.7   6.9e-05      0.31      46      84 ..      11      49 ..       4      66 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 6.9e-05
                S-GGG--EEE---------HHHHHHHHHHHHHHCCT--E CS
  PF00814.20 46 lsledldaIavtkgPGlftgLrvGvsfAkglalaldkpl 84
                l++++  a+a + g G++ +Lrv v++A g+a+a     
  MMETSP1325-20131115|2737_1 11 LAPAEAAAVAWAVGLGMVRALRVPVTIALGVAHAVSARA 49
                6788899*************************9987655 PP

>> PF11857.3  Domain of unknown function (DUF3377)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.0   0.00054       2.4      28      52 ..      44      71 ..      28      72 .] 0.73

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00054
   PF11857.3 28 tvnavaV...viPlvLalCiLvlvytiv 52
                +v+a a+   v+P+ L+l ++ lv+t+v
  MMETSP1325-20131115|2737_1 44 AVSARAIswtVLPVHLVLVVVSLVLTVV 71
                44444443349****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|2738_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   14.8   3.0      0.032   14.4   2.1    1.1  1  PF01620.11 Ribonuclease (pollen allergen)
      0.089   12.2   0.4       0.17   11.2   0.3    1.7  1  PF07352.7  Bacteriophage Mu Gam like protein
       0.23   10.6   6.4       0.31   10.1   4.4    1.1  1  PF00529.15 HlyD family secretion protein


Domain annotation for each model (and alignments):
>> PF01620.11  Ribonuclease (pollen allergen)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   2.1   6.9e-06     0.032      34     133 ..      45     146 ..      23     149 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 6.9e-06
                 ............X---HHHHHHHHHHHHHHHHHHHHHTTTS-HHHHHHH...HHHHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHH.HHHHH.TS-TTTHHHHHH CS
  PF01620.11  34 tPatpaatpaaaagkatteeqkliedinagfkaavaaaaevppadkfkt...Feealtaaskaqvasasskaaklsskldaaykla.Ykaaq.gatpeaKydafv 133
                  Pa+ ++   +aa    t + +l++d   + +a+ +a++++ +++++      ++a  +  kaq ++++s+++ l +k  a y++     aq   + e+K +a v
  MMETSP1325-20131115|2738_1  45 LPAVKET---TAAEASPTAPPTLMDDASLTARADAHAEEMAASKENIEGmknGVAAYHEGLKAQFEEQASSMNGLRAKATADYTAVmLRRAQyRQSCEDKIEALV 146
                 6777777...444445699****************999998888887661115566678899*****************99997541445552456777777766 PP

>> PF07352.7  Bacteriophage Mu Gam like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   3.8e-05      0.17      33      68 ..      73     108 ..      47     156 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.8e-05
   PF07352.7  33 ieekykaeleplkkeieyleslveeYceanreelpk 68 
                   +++++e+++ k++ie ++++v +Y+e  ++++ +
  MMETSP1325-20131115|2738_1  73 RADAHAEEMAASKENIEGMKNGVAAYHEGLKAQFEE 108
                 4567899***********************999882 PP

>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.4   6.9e-05      0.31      34     156 ..      13     136 ..      13     138 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 6.9e-05
                 --HHHHHHHHHHHHHHHHHHH...HH.......HHHHHHHTTTSS.......-HHHHHHHHHHHHHH..........HHHHHHHHHHHHTTEEE-S--.-----BSS-B---------S-SEEEEEESS CS
  PF00529.15  34 Dptpaqaalaraeaelaaaqadaaqarlaaekrerlqalvkqqaa......esekeadaarrearealaasqalaaskaeleaardnlasaeaalpaslgsikasqatlgalltnlqaqglaakaqlde 156
                 D+tp++ +  raea +a +    a++++++  r++    vk   a      +  +  d+a   ar +  a+   aask+ +e  + ++a+  ++l+a+  +++ s + l+a  t++ ++++ ++aq+ +
  MMETSP1325-20131115|2738_1  13 DDTPLEKR--RAEALSAEIVD--AELEAKRVARRGDLPAVKETTAaeasptAPPTLMDDASLTARADAHAEE-MAASKENIEGMKNGVAAYHEGLKAQFEEQASSMNGLRAKATADYTAVMLRRAQYRQ 136
                 88999999..88888887776..8888899989999988888888888888888888999888888866666.6************************99999999999999999***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 937.70
//
Query:       MMETSP1325-20131115|2741_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 502.77
//
Query:       MMETSP1325-20131115|2743_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.3   2.9      0.079   12.1   2.0    1.2  1  PF12090.3  Spt20 family
       0.22   10.3   5.1       0.28   10.0   3.5    1.1  1  PF08610.5  Peroxisomal membrane protein (Pex16)
       0.52    8.3  22.9       0.52    8.3  15.9    1.1  1  PF09770.4  Topoisomerase II-associated protein PAT1
       0.69    8.0   5.2        0.9    7.6   3.6    1.1  1  PF00771.15 FHIPEP family
        2.3    7.9  17.9        2.8    7.6  12.4    1.1  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        3.8    5.4  37.8        4.6    5.2  26.2    1.0  1  PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal


Domain annotation for each model (and alignments):
>> PF12090.3  Spt20 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.0   3.5e-05     0.079      95     138 ..      26      92 ..       8     147 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.5e-05
   PF12090.3  95 saeneqqaktqksknqkk.......................fkkprvkrtlLrpTpeslladlksla 138
                 +++++qq+++q++++q++                       +++p   +  ++ T +s+++ +++ +
  MMETSP1325-20131115|2743_1  26 QQQQQQQQQQQQQQQQQQlahtahqqqlafatssigtplhdLQTPWQLQPRMQHTLQSVQQAIMQQT 92 
                 2222222222222222223345667778888888887777766666666666666666666666655 PP

>> PF08610.5  Peroxisomal membrane protein (Pex16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.5   0.00012      0.28     138     210 ..      19      91 ..       8     107 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00012
   PF08610.5 138 vpqrerkaesseeekndesnsdsekgkknsssqslefklkRsgrvvrkleklPsialrsnsllskvltekdvk 210
                   +++  ++++++++++++++++++  +   +q+l+f++++ g+ ++ l+   +++ r + +l++v+++   +
  MMETSP1325-20131115|2743_1  19 AHALQMAQQQQQQQQQQQQQQQQQQLAHTAHQQQLAFATSSIGTPLHDLQTPWQLQPRMQHTLQSVQQAIMQQ 91 
                 5567777888888888888888888888999***************999987555555444577666654444 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  15.9   0.00023      0.52     234     314 ..      15      92 ..       3     156 .. 0.49

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00023
   PF09770.4 234 paqlpqqlqnlqqqqlpqlsqqmppqpvqppq.qqqqqvlklpqaqppplqqlsaspqlaqqqlaslplpqqpqqkalvqqe 314
                  aq    lq +qqqq++q++qq+++q++q ++  +qqq  + +++ ++pl+ l+ +     q +++ +   q+ q+a++qq 
  MMETSP1325-20131115|2743_1  15 NAQNAHALQMAQQQQQQQQQQQQQQQQQQLAHtAHQQQLAFATSSIGTPLHDLQTPW----QLQPRMQHTLQSVQQAIMQQT 92 
                 333333333333333333333333333333332233333444444444544222221....222222222222223333332 PP

>> PF00771.15  FHIPEP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.6    0.0004       0.9     291     369 ..      11      93 ..       3     102 .. 0.47

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0004
  PF00771.15 291 layllkkkkkeeekeeeeeekeeeeeeeeeeesveevlkvd...plelelgyklielvdeeq.ggellerikairkklaeelG 369
                 la +  +++++ + ++++++++++++++++++++ ++ + +     + ++g+ l +l +  q + ++++ ++++++++++++G
  MMETSP1325-20131115|2743_1  11 LAAVNAQNAHALQMAQQQQQQQQQQQQQQQQQQLAHTAHQQqlaFATSSIGTPLHDLQTPWQlQPRMQHTLQSVQQAIMQQTG 93 
                 33333333322222222222223333333333333333333000334455555555555555233478888888888888888 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  12.4    0.0012       2.8     120     215 ..      15     128 ..       3     159 .. 0.38

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0012
                 XXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXX............XXXXXXXXXXX...........XXXXXXXXXXXXXXXXXXX............XXXXXXXXXXXXX....... CS
   PF03153.8 120 evpvmvtqnsanselqqpaqqraaqqlqqslgapassqas............slqqqpaplks.......neesqeqqqpgkeiqqqqtdgasdde.........kasvarrreaaas.qeaeld 215
                 +  +    ++a+++  q +qq++ qq+qq+++a ++ q++            +         +       ++  q + q+ ++  +qqt +a+++          +++ +++  aa s  +++  
  MMETSP1325-20131115|2743_1  15 NAQNAHALQMAQQQ--QQQQQQQQQQQQQQQLAHTAHQQQlafatssigtplH---------DlqtpwqlQPRMQHTLQSVQQAIMQQTGSAGSSHitglggvygSSMAMQSSGAATSiRSSNNR 128
                 22222222222222..1111222222222222222222222332222223222.........244444333333333333333333444444444355777777544455555555445333333 PP

>> PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  26.2     0.002       4.6     193     324 ..       5     140 ..       2     160 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.002
   PF09606.5 193 Psqmgqpaav..qqaqqqqmqqqqqaggqqqqqplqqqqqlqkqqnqqqqqkqlqqqqgqaqaqaqmqqqqqaqggmqpqqmagaqaqv.amqqqqtqqqaqqsqlqvlinqlqqlqq........pqgdrnavgqgapgqll 324
                 P +m q aav  q+a   qm qqqq++ qqqqq+ qqqqql +  +qqq    l     +++ +  +++ q +++ ++  q    + q  +mqq  +        l+   ++ + +q         +  +r+  g ++p   l
  MMETSP1325-20131115|2743_1   5 PYAMAQLAAVnaQNAHALQMAQQQQQQQQQQQQQ-QQQQQLAHTAHQQQ----LA--FATSSIGTPLHDLQTPWQLQPRMQHTLQSVQQaIMQQTGSAGSSHITGLGGVYGSSMAMQSsgaatsirSSNNRGELGSEMPSAAL 140
                 5556655555334444444444444444444444.46666655555552....22..22445555555555555544433333333332144455444455555566666777777664444444444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3787  (0.276989); expected 273.4 (0.02)
Passed bias filter:                     1693  (0.12383); expected 273.4 (0.02)
Passed Vit filter:                       250  (0.0182855); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.46s 00:00:01.32 Elapsed: 00:00:00.82
# Mc/sec: 482.19
//
Query:       MMETSP1325-20131115|2748_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   13.9   0.1       0.03   13.4   0.1    1.2  1  PF03942.10 DTW domain
      0.076   12.5   2.3       0.13   11.8   1.6    1.4  1  PF04438.11 HIT zinc finger


Domain annotation for each model (and alignments):
>> PF03942.10  DTW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   4.4e-06      0.03       3      27 ..      56      80 ..      54      84 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.4e-06
  PF03942.10  3 klCekCkvpvkdclcellprlelrl 27
                ++C+kC +p k  +ce++prl lr+
  MMETSP1325-20131115|2748_1 56 YKCSKCGLPKKGHICEYQPRLRLRT 80
                79*******************9987 PP

>> PF04438.11  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.6   1.9e-05      0.13      11      22 ..      53      64 ..      50      72 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.9e-05
  PF04438.11 11 pakYkCpkCntr 22
                 ++YkC+kC+ +
  MMETSP1325-20131115|2748_1 53 RGNYKCSKCGLP 64
                68********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.31s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 613.02
//
Query:       MMETSP1325-20131115|2749_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 991.43
//
Query:       MMETSP1325-20131115|2753_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|2747_1  [L=499]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00051   18.6  12.2    0.00051   18.6   8.4    3.4  4  PF08317.6  Spc7 kinetochore protein
      0.005   15.0  36.8     0.0076   14.4   1.0    3.3  3  PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
  ------ inclusion threshold ------
        2.2    7.8   6.7       0.87    9.2   0.1    3.4  3  PF09548.5  Stage III sporulation protein AB (spore_III_AB)
        3.3    7.2  45.3        3.4    7.1   0.1    5.5  6  PF03962.10 Mnd1 family


Domain annotation for each model (and alignments):
>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   1.2     0.023        80     208     240 ..      45      76 ..       3      80 .. 0.52
   2 ?   -2.3   0.2      0.36   1.2e+03     223     237 ..     152     164 ..     114     180 .. 0.37
   3 !   18.6   8.4   1.5e-07   0.00051     143     290 ..     212     371 ..     211     388 .. 0.86
   4 ?   -2.0   0.2      0.29   9.9e+02     158     198 ..     456     497 ..     452     499 .] 0.65

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.023
   PF08317.6 208 seeleklreeLssleekieekrkkleeleeelq 240
                 ++el +l ++L+++e ++++ + + +el+++l+
  MMETSP1325-20131115|2747_1  45 RTEL-QLNSQLRQMEAQLNHAKAEANELQDKLD 76 
                 2222.3455555555555555555555555554 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.36
   PF08317.6 223 ekieekrkkleelee 237
                  +i+  r++   l+ 
  MMETSP1325-20131115|2747_1 152 ANIT--RQESDRLKR 164
                 1111..222223333 PP

  == domain 3    score: 18.6 bits;  conditional E-value: 1.5e-07
   PF08317.6 143 RmklleglkeeLeenleelkedeellnk...klelinsilpklrekkealkeelasLrqlkde.......leecds..eeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekileecrgfsakeisklkekvsllek 290
                 R++ leg+ ++L++ +++lk+++e l++   ++++i+ +  + re k+al +  ++L +++ +       ++   +  e++++l+ +L+ +++++   ++++ +  ++  + +++ ++++  +++l+e++a+++    ++ +   + +s+++ +v+++ +
  MMETSP1325-20131115|2747_1 212 RERDLEGVVDGLQRVVHKLKSENERLRNgaaDQAKISAAERRARESKTALARVEEELASMRARatagddaMNRLAQrtEQVNQLKRQLRVRDDEVRGAKRQMDDALSRAGTRDEEANQAARRVAQLEEQVASLKARETQSNEVGGDVMSSMTSQVEQMRR 371
                 78899*********************853338999**9999999999988777777777776666698885554432278******************************************************99999998888888888888888766 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 0.29
   PF08317.6 158 leelkedeellnkklelin.silpklrekkealkeelasLrq 198
                 l +l++++++l+++l   + + +++++++k +  e l++Lrq
  MMETSP1325-20131115|2747_1 456 LRKLQDENAKLKAELSHFDlDFFEEIEDLKYKYAEALRKLRQ 497
                 566777777777777776656667777777777766666666 PP

>> PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   1.0   2.2e-06    0.0076     144     196 ..      25      77 ..      23      87 .. 0.94
   2 !    8.9   4.5   0.00011      0.36     172     304 ..     116     311 ..     108     314 .. 0.76
   3 ?   -2.1  17.6      0.23     8e+02     162     351 ..     264     480 ..     244     494 .. 0.63

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.2e-06
   PF07888.6 144 qLeeaqkerndLmkkklalegevselrsrieeLeaaLatsekkteeLkekyke 196
                  Le++++er++  +k+ +l     +l+s+++++ea L++++ +++eL++k ++
  MMETSP1325-20131115|2747_1  25 DLEQCRRERDEALRKNDELGRTELQLNSQLRQMEAQLNHAKAEANELQDKLDK 77 
                 69**********************************************99876 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00011
   PF07888.6 172 rieeLeaaLatsekkteeLkekykeissseeeiseerni.Lsaqrae.nrerileLeddiqtlskkv.................................reqeklleqlkeikaelerekaelk.......................qrlkektvqik.......deeteaidlqleleslkekLrsaqellessqq 304
                 r   L+  L++ ++++++L+ k   + + ++ +  e+++ +++q+++ +++r++eLe   q+++ +                                  r+ e ++++l+ +  +l  e+  l+                        r++e  + ++       d + +  ++  ++++lk +Lr   + +  +++
  MMETSP1325-20131115|2747_1 116 RAAALQDELDVLRREKKQLELKL--LAQDSGALELEFDAnITRQESDrLKRRVRELEAAFQSVAAQGaatggasgarvpapgegaygpgdrkagarfqreRDLEGVVDGLQRVVHKLKSENERLRngaadqakisaaerraresktalARVEEELASMRaratagdDAMNRLAQRTEQVNQLKRQLRVRDDEVRGAKR 311
                 55678888999999999888665..555556666666543445555526889************99999****************************98866778888999888888888877888888888888888888888999967777666665222222144445567788999999999999888776665 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.23
   PF07888.6 162 legev.................selrsrieeLeaaLatsekkteeLkekykeissseeeiseerniLsaqraenrerileLeddiqtlskkvreqeklleq.lkeikaelerekaelk................qrlkektvqikdeeteaidlqleleslkekLrsaqellessqqkat.llgeeLaslasl.rdrtiaeLhksrLesaelslklselslklkeg 351
                 +e+e                  ++  +++++L++ L++  ++    k++++++ s+ ++  ee n          +r+ +Le+++++l+ +  + + + ++ +  +  + e+++ e                   r   + + +  e + ++ +  e e+++ +Lr     ++  q+++   l + L + +        aeL k + e a+l+ +ls+ +l + e+
  MMETSP1325-20131115|2747_1 264 VEEELasmraratagddamnrlAQRTEQVNQLKRQLRVRDDEVRGAKRQMDDALSRAGTRDEEANQ-------AARRVAQLEEQVASLKARETQSNEVGGDvMSSMTSQVEQMRRERDqarkaaadaqrelanaGRAS-REASRSGEYGARQSREREPEDMR-QLRVELASAQREQRRTQeRLDRALREGGGGgGGGDSAELRKLQDENAKLKAELSHFDLDFFEE 480
                 455553333333333333444466677888888888888888888888888888888887777663.......34688888888888888876666666551456777777777776666677777766665543333.33445556677777777766665.455554444444544432466666665544134567888888888888888888888888776 PP

>> PF09548.5  Stage III sporulation protein AB (spore_III_AB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.6       0.4   1.4e+03     130     148 ..      51      69 ..      31      78 .. 0.51
   2 ?    9.2   0.1   0.00025      0.87      16      65 ..     278     327 ..     271     380 .. 0.81
   3 ?   -0.4   0.0      0.21   7.3e+02      24      56 ..     410     442 ..     398     445 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.4
   PF09548.5 130 elaleeLekeeeeaeeeqk 148
                 +  l+++e++++ a++e++
  MMETSP1325-20131115|2747_1  51 NSQLRQMEAQLNHAKAEAN 69 
                 2233333333333333332 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00025
   PF09548.5  16 GfliakkykerpkqLrelkkaLqlLeaeIsygatpLpealekiaeksekp 65 
                 G  + +++ +r++q ++lk+ L + + e++  + ++ +al++ +++ e++
  MMETSP1325-20131115|2747_1 278 GDDAMNRLAQRTEQVNQLKRQLRVRDDEVRGAKRQMDDALSRAGTRDEEA 327
                 6667899***********************************98876654 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.21
   PF09548.5  24 kerpkqLrelkkaLqlLeaeIsygatpLpeale 56 
                 ++ p+ +r+l+  L + + e + ++  L +al+
  MMETSP1325-20131115|2747_1 410 EREPEDMRQLRVELASAQREQRRTQERLDRALR 442
                 345889999999999999999999999988876 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   1.0    0.0027       9.3     109     157 ..      26      74 ..       3      85 .. 0.62
   2 ?    6.7   1.1    0.0013       4.6      66     128 ..      49     133 ..      44     147 .. 0.74
   3 ?    7.1   0.1     0.001       3.4      75     162 ..     156     272 ..     146     278 .. 0.74
   4 ?    6.8   7.2    0.0012       4.2      64     149 ..     285     371 ..     276     372 .. 0.86
   5 ?    5.0   5.6    0.0045        15      64     130 ..     359     434 ..     354     443 .. 0.84
   6 ?    3.6   0.1     0.012        40     110     151 ..     454     495 ..     451     499 .] 0.82

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0027
  PF03962.10 109 leelkeleeelkklkkeleklakldpekveklkeetevakesanrwtDn 157
                 le+++  ++e  +++ el  ++ + ++++++++++ ++ak++an  +D 
  MMETSP1325-20131115|2747_1  26 LEQCRRERDEALRKNDELGRTELQLNSQLRQMEAQLNHAKAEANELQDK 74 
                 4555555555555555555555555566666666666666666666554 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0013
  PF03962.10  66 klkteleklkkeleelkqrikelqaeieke..kkkreet....................eereelleelkeleeelkklkkelek 128
                 +l+++l++++++l+++k++ +elq++++k+  + +r+                      +e  +++ + ++l++el+ l++e ++
  MMETSP1325-20131115|2747_1  49 QLNSQLRQMEAQLNHAKAEANELQDKLDKAgpAGGRRTGggeesksdgggafsgrgrslRESDDAMLRAAALQDELDVLRREKKQ 133
                 78899999******************99996444444448888899999999888877755555666666666666666655553 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.001
  PF03962.10  75 kkeleelkqrikelqaeiekekkkreet..........................eeree.lleelkeleeelkklkkele..klakldpekveklkeetevakesanrwtDniflle 162
                 ++e ++lk+r+ el+a++++ +++   t                           +re+ l   ++ l++ ++klk+e e       d++k+   ++  ++ k ++ r+++++ +++
  MMETSP1325-20131115|2747_1 156 RQESDRLKRRVRELEAAFQSVAAQGAATggasgarvpapgegaygpgdrkagarFQRERdLEGVVDGLQRVVHKLKSENErlRNGAADQAKISAAERRARESKTALARVEEELASMR 272
                 455555566666666666665555555556666667788888999999999998566663666778899999999999996666789999999999999999999999998887765 PP

  == domain 4    score: 6.8 bits;  conditional E-value: 0.0012
  PF03962.10  64 kkklkteleklkkeleelkqrikelqaeiekekkkreet.eereelleelkeleeelkklkkeleklakldpekveklkeetevake 149
                   ++ +++++lk++l   + ++  ++++++++ ++     ee +++ +++++lee++ +lk+  ++ ++   +++ +++ ++e++++
  MMETSP1325-20131115|2747_1 285 LAQRTEQVNQLKRQLRVRDDEVRGAKRQMDDALSRAGTRdEEANQAARRVAQLEEQVASLKARETQSNEVGGDVMSSMTSQVEQMRR 371
                 468899999999999999999999999999994444433379999***********************************9998875 PP

  == domain 5    score: 5.0 bits;  conditional E-value: 0.0045
  PF03962.10  64 kkklkteleklkkeleelkqrikelqaeieke.kkkreet........eereelleelkeleeelkklkkelekla 130
                 ++++ +++e++++e +++++  +++q+e++++ +++re +        + re+  e +++l+ el + ++e + ++
  MMETSP1325-20131115|2747_1 359 MSSMTSQVEQMRRERDQARKAAADAQRELANAgRASREASrsgeygarQSREREPEDMRQLRVELASAQREQRRTQ 434
                 6788999**********************999677777779999**999999999999999999999999887433 PP

  == domain 6    score: 3.6 bits;  conditional E-value: 0.012
  PF03962.10 110 eelkeleeelkklkkeleklakldpekveklkeetevakesa 151
                  el++l++e+ klk+el+ +     e++e+lk +  +a++++
  MMETSP1325-20131115|2747_1 454 AELRKLQDENAKLKAELSHFDLDFFEEIEDLKYKYAEALRKL 495
                 6899**************888888888888888877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1635  (0.119587); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                        41  (0.00299883); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 2.04u 0.37s 00:00:02.41 Elapsed: 00:00:00.90
# Mc/sec: 1328.65
//
Query:       MMETSP1325-20131115|2755_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.8   0.4       0.52   10.0   0.0    2.0  2  PF08827.6 Domain of unknown function (DUF1805)


Domain annotation for each model (and alignments):
>> PF08827.6  Domain of unknown function (DUF1805)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0     0.066     9e+02      42      51 ..      10      19 ..       4      31 .. 0.72
   2 ?   10.0   0.0   3.8e-05      0.52      27      52 ..      44      68 ..      36      71 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.066
   PF08827.6 42 eelGikvGmt 51
                +e G +vGm 
  MMETSP1325-20131115|2755_1 10 REIGPEVGME 19
                6677777774 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 3.8e-05
   PF08827.6 27 ddlLkaeveevtkaAeelGikvGmtg 52
                ddl    v++v  +A++lG+++Gm++
  MMETSP1325-20131115|2755_1 44 DDLVIHDVSAVG-QAQSLGVRRGMVV 68
                777777777775.69*********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 370.76
//
Query:       MMETSP1325-20131115|2757_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-22   78.6   0.0    9.2e-07   28.4   0.0    4.1  4  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   6.6e-08   0.00091       2      39 .]       6      43 ..       5      43 .. 0.96
   2 !   17.5   0.0   1.8e-07    0.0024       5      39 .]      51      85 ..      47      85 .. 0.88
   3 !   28.4   0.0   6.7e-11   9.2e-07       3      39 .]      91     127 ..      89     127 .. 0.95
   4 !    9.3   0.0   6.8e-05      0.93       1      19 [.     132     150 ..     132     151 .] 0.91

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 6.6e-08
                EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  2 eckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                e k++l++ ++ V cv+++p  p+++s+ ++g+  +Wd
  MMETSP1325-20131115|2757_1  6 EIKKKLQARSDRVKCVDVHPVEPWVLSALYNGNAFIWD 43
                56899********************************9 PP

  == domain 2    score: 17.5 bits;  conditional E-value: 1.8e-07
                EEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  5 atlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                ++++  + pV++ +f    ++++++S+D  ir+++
  MMETSP1325-20131115|2757_1 51 KSFDVCELPVRSAKFIVRKQWFVTASDDMHIRVYN 85
                566667789************************96 PP

  == domain 3    score: 28.4 bits;  conditional E-value: 6.7e-11
                 EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   3 ckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                  ++++++H++ ++ + ++p++pll+s+ +D + +lW+
  MMETSP1325-20131115|2757_1  91 KIKEFEAHSDYIRYIEVHPTMPLLISAADDMSMKLWN 127
                 6789********************************7 PP

  == domain 4    score: 9.3 bits;  conditional E-value: 6.8e-05
                 TEEEEEEESSSSSEEEEEE CS
  PF00400.27   1 geckatlrgHtspVtcvaf 19 
                 +ec+++++gH + V  v+f
  MMETSP1325-20131115|2757_1 132 WECTQVFEGHLHYVMMVKF 150
                 89************98887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 786.63
//
Query:       MMETSP1325-20131115|2754_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.03   14.7   3.5       0.11   12.8   2.5    1.9  2  PF14086.1 Domain of unknown function (DUF4266)


Domain annotation for each model (and alignments):
>> PF14086.1  Domain of unknown function (DUF4266)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.5   8.2e-06      0.11      12      48 ..     110     146 ..     108     147 .. 0.80
   2 ?   -3.0   0.0       0.7   9.6e+03      28      38 ..     152     162 ..     150     163 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 8.2e-06
   PF14086.1  12 peMaldrdplesalddhvyfsrEgasgggGkaGGGCG 48 
                  eM ld+++++++l++ +  s+  as+ggG +GGG G
  MMETSP1325-20131115|2754_1 110 REMLLDDELDAAQLQQYTRRSEGMASSGGGGGGGGGG 146
                 79*****************998878666666666654 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 0.7
   PF14086.1  28 hvyfsrEgasg 38 
                 h ++ r++a g
  MMETSP1325-20131115|2754_1 152 HYSQRRPAADG 162
                 78899999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 1163.23
//
Query:       MMETSP1325-20131115|2758_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-06   27.9  17.6     0.0001   22.2   5.2    2.6  2  PF07974.8  EGF-like domain
  ------ inclusion threshold ------
       0.53   10.1  11.5      0.075   12.8   3.9    2.3  2  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   5.2   1.5e-08    0.0001       7      32 .]      53      78 ..      45      78 .. 0.91
   2 !   10.8   1.7   5.4e-05      0.37       1      15 [.      83      98 ..      83     100 .. 0.80

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 1.5e-08
   PF07974.8  7 iCgghGtCvkqcgkCvCdsgyqGktC 32
                +Cgg G+C+  +gkC C++g+ G  C
  MMETSP1325-20131115|2758_1 53 ECGGVGKCDYAKGKCACYDGFAGVAC 78
                5********77**************9 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 5.4e-05
   PF07974.8  1 Csad.g.liCgghGtCv 15
                C++  + + C+ghGtC 
  MMETSP1325-20131115|2758_1 83 CPTQnDfP-CNGHGTCH 98
                88775655.*******5 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   3.9   1.1e-05     0.075       3      32 ..      54      79 ..      47      87 .. 0.87
   2 ?   -0.4   0.6      0.14   9.8e+02       3      15 ..      91      99 ..      83     104 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.1e-05
                STT-B-CC--B-S----BSBSTTEE---S- CS
  PF00053.19  3 CnphgsssssCdsstgqClCkenveGrkCd 32
                C + g    +Cd  +g+C C ++++G  C+
  MMETSP1325-20131115|2758_1 54 CGGVG----KCDYAKGKCACYDGFAGVACE 79
                44444....9*******************8 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.14
                STT-B-CC--B-S CS
  PF00053.19  3 CnphgsssssCds 15
                Cn+hg    +C+s
  MMETSP1325-20131115|2758_1 91 CNGHG----TCHS 99
                88888....6665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 646.56
//
Query:       MMETSP1325-20131115|2762_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 630.35
//
Query:       MMETSP1325-20131115|2760_1  [L=364]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-25   88.1   0.0    8.3e-20   70.8   0.0    2.3  2  PF00334.14 Nucleoside diphosphate kinase


Domain annotation for each model (and alignments):
>> PF00334.14  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   9.9e-07     0.014       4      91 ..      98     183 ..      95     200 .. 0.88
   2 !   70.8   0.0   6.1e-24   8.3e-20       2     131 ..     221     359 ..     220     362 .. 0.96

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 9.9e-07
                 EEEE-HHHHCTT-HHHHHHHHHH---EEEEEEEE---HHHHHHHTGGGTTSTTHHHHHHHHT---EEEEEEE---CHHHHHHH----S CS
  PF00334.14   4 lvliKPdavkrgligeiisrleekglkivalkmlqlteeqaeehYaehkgkpffeelvefitsgpvvalvlegenavekvrellGatn 91 
                 +v++ Pda     +g+i+  +e++gl++ +l  +ql e++++e            +l++  tsg++va+ ++g++  ++v e++ + +
  MMETSP1325-20131115|2760_1  98 VVVLSPDAY--LNMGKIMGDFEAEGLRLDKLCTVQLGEAELSELLPLLGIDGPDGQLISLWTSGVLVAMSIKGQQSSTRVPEMVSSLK 183
                 688899999..468*******************************9999988899******************999999888876655 PP

  == domain 2    score: 70.8 bits;  conditional E-value: 6.1e-24
                 -EEEEE-HHHHCTT-HHHHHHHHHH---EEEEEEEE---HHHHHHHTGGGTT.STTHHHHHHHHT---EEEEEEE-.....--CHHHHHHH----STTCS...------------GGG-SEEE--SHHHHHHHHHHHS- CS
  PF00334.14   2 rtlvliKPdavkrgligeiisrleekglkivalkmlqlteeqaeehYaehkg.kpffeelvefitsgpvvalvleg.....enavekvrellGatnpaea...apgtiRgdfavslgeNlvHgSdseesaereiklfFk 131
                  t+ +i+P+avk+g +  ii+ + e+g++i+al+m  l++  a+e+ + ++g  p +++ v  ++sg ++a+ +++      ++ +++rel+G+ +++ a   +p++iR+ ++v+   N++H +d +e+a  e+ +fF+
  MMETSP1325-20131115|2760_1 221 ATCGVIRPHAVKSGDAPAIIDAVLESGFEISALQMFSLDKTCASEFLEVYQGvIPEYHDTVLELCSGTCIAMEVKAprgsgLEVCSAFRELAGPWDVEMArelKPKSIRACYGVNRVMNALHVTDLVEDAVPECLYFFD 359
                 68899***********************************************889*******************997777789**************999999**********************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.33s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 1744.55
//
Query:       MMETSP1325-20131115|2763_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-08   32.7   2.1    5.9e-08   32.2   1.4    1.2  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    1.3e-07   30.9   0.5    5.6e-06   25.7   0.3    2.2  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    2.7e-07   30.0   2.0    3.4e-07   29.6   1.4    1.1  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    5.2e-07   29.1   2.5    1.2e-06   28.0   1.8    1.6  2  PF13639.1  Ring finger domain
    5.6e-07   29.0   0.8    1.1e-06   28.0   0.5    1.5  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    1.3e-05   25.0   0.3    1.7e-05   24.7   0.2    1.2  1  PF12678.2  RING-H2 zinc finger
    2.3e-05   23.6   0.1    2.3e-05   23.6   0.1    1.1  1  PF04641.7  Replication termination factor 2
     0.0033   16.7   3.5     0.0083   15.5   2.2    1.7  2  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
     0.0062   15.9   0.5          2    7.9   0.1    3.1  3  PF13719.1  zinc-ribbon domain
     0.0087   15.7   0.2      0.012   15.3   0.1    1.3  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
     0.0093   15.5   0.5        2.1    8.0   0.1    3.1  3  PF13717.1  zinc-ribbon domain
  ------ inclusion threshold ------
      0.048   13.0   1.1      0.082   12.3   0.8    1.4  1  PF14447.1  Prokaryotic RING finger family 4
      0.065   12.9   0.3      0.087   12.5   0.2    1.3  1  PF06906.6  Protein of unknown function (DUF1272)
       0.13   11.6   2.2       0.19   11.2   0.2    2.0  2  PF09297.6  NADH pyrophosphatase zinc ribbon domain
       0.14   11.7   2.6        2.4    7.7   0.1    2.2  2  PF14446.1  Prokaryotic RING finger family 1
       0.19   11.3   3.2        2.4    7.7   0.0    2.5  2  PF10571.4  Uncharacterised protein family UPF0547
       0.25   11.6   2.1       0.49   10.6   0.2    2.3  3  PF13465.1  Zinc-finger double domain
       0.26   11.6   5.5        1.8    9.0   0.5    2.4  2  PF13894.1  C2H2-type zinc finger
          1    9.3   3.3       0.99    9.3   1.3    1.9  2  PF14369.1  zinc-finger
        5.2    7.5   6.4        3.9    7.9   0.4    2.3  2  PF00096.21 Zinc finger, C2H2 type


Domain annotation for each model (and alignments):
>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   1.4   8.7e-11   5.9e-08       3      46 .]      21      63 ..      19      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 8.7e-11
   PF13923.1  3 fsCpiCleelenpviltpCgHlyCkkCieqwlekskkkCPiCrn 46
                  Cpi ++++++  +l++CgH + + Ci++ l    ++CP C++
  MMETSP1325-20131115|2763_1 21 VNCPILKDKPKEV-VLIRCGHTFSRACIDKRLADRMRRCPSCNK 63
                67***88888886.78*************999987889****95 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.3   8.2e-09   5.6e-06      12      57 ..      22      59 ..      15      60 .. 0.82
   2 !    6.9   0.0    0.0062       4.2      13      30 ..      58      76 ..      55      77 .] 0.94

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 8.2e-09
                B-TTT-S.-SS....EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
   PF13445.1 12 aCpiske.qsteqnpPvvLpCGhvisrealeklakggrsnkgrfkCP 57
                 Cpi+k+  ++     v+++CGh++sr ++ k +      +++++CP
  MMETSP1325-20131115|2763_1 22 NCPILKDkPKE----VVLIRCGHTFSRACIDKRLA-----DRMRRCP 59
                5******7766....56677**********99887.....3499999 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0062
                -TTT-S.-SS....EEEES CS
   PF13445.1 13 Cpiske.qsteqnpPvvLp 30
                Cp + + +s+++ +P++L+
  MMETSP1325-20131115|2763_1 58 CPSCNKgFSNDDVKPIYLT 76
                ****************997 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   1.4     5e-10   3.4e-07       2      46 ..      20      64 ..      19      67 .. 0.90

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 5e-10
   PF13920.1  2 kktCvvClereadvlllpCgHlclCeeCaerllk.rkkkCpiCrsp 46
                k +C++ ++++++v+l++CgH  +  +C ++ l  r ++Cp C++ 
  MMETSP1325-20131115|2763_1 20 KVNCPILKDKPKEVVLIRCGHT-FSRACIDKRLAdRMRRCPSCNKG 64
                679*******************.*****9988777********986 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.2   8.2e+02      35      42 ..      18      25 ..       9      28 .. 0.77
   2 !   28.0   1.8   1.8e-09   1.2e-06       3      45 ..      23      63 ..      21      64 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 1.2
   PF13639.1 35 rssnsCPl 42
                +++ +CP+
  MMETSP1325-20131115|2763_1 18 QRKVNCPI 25
                56678996 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 1.8e-09
   PF13639.1  3 CaiCldelsegeevvrlpCgHvfHeeCldewlrss.nsCPlCrk 45
                C+i  d+    +evv ++CgH+f + C+d+ l  + ++CP C k
  MMETSP1325-20131115|2763_1 23 CPILKDKP---KEVVLIRCGHTFSRACIDKRLADRmRRCPSCNK 63
                55555554...79*****************9977658*****86 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.57   3.9e+02      33      39 ..      18      24 ..       8      25 .. 0.75
   2 !   28.0   0.5   1.6e-09   1.1e-06       1      41 []      23      61 ..      23      61 .. 0.94

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.57
                T-----T CS
  PF00097.20 33 rkkvkCP 39
                ++kv+CP
  MMETSP1325-20131115|2763_1 18 QRKVNCP 24
                67999*9 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 1.6e-09
                -TTTSSS-SSEE.BSCTS-EE-CHHHHHHHCST-----TTT CS
  PF00097.20  1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41
                Cpi ++++ke + l+ C+H+f ++Ci+k l  ++ + CP C
  MMETSP1325-20131115|2763_1 23 CPILKDKPKEVV-LIRCGHTFSRACIDKRLA-DRMRRCPSC 61
                9999999***99.******************.78888**** PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.2   2.4e-08   1.7e-05      40      75 .]      23      62 ..       6      62 .. 0.72

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 2.4e-08
   PF12678.2 40 g...ksdecpvawgeCgHaFHlhCiskWlktrk.tCPlcr 75
                    k++  +v++ +CgH F   Ci k l  r   CP c+
  MMETSP1325-20131115|2763_1 23 CpilKDKPKEVVLIRCGHTFSRACIDKRLADRMrRCPSCN 62
                343334447778889**********999965555*****7 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.1   3.3e-08   2.3e-05     116     168 ..      23      73 ..       2      77 .] 0.80

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 3.3e-08
   PF04641.7 116 CpvtglelngktkfvalrkcGcVfsekalkev.k.eekvCpvCnkefkeedvvpl 168
                 Cp+    l++k k v+l+ cG+ fs   + +      + Cp Cnk+f+++dv p+
  MMETSP1325-20131115|2763_1  23 CPI----LKDKPKEVVLIRCGHTFSRACIDKRlAdRMRRCPSCNKGFSNDDVKPI 73 
                 555....4678899**************96542555667************9555 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1     0.094        64      44      53 ..      16      25 ..       2      28 .. 0.67
   2 !   15.5   2.2   1.2e-05    0.0083       5      57 .]      14      62 ..      10      62 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.094
                TTT--B---- CS
   PF11789.3 44 krkkkvkCPv 53
                + ++kv+CP+
  MMETSP1325-20131115|2763_1 16 DLQRKVNCPI 25
                5578999998 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 1.2e-05
                XXXXXXX-B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT--B-------- CS
   PF11789.3  5 veeerislkCpltlkpfkePvtskkCnHvFEkeaIlkmlkrkkkvkCPvaGCs 57
                ++  + + +Cp+ +++ ke v   +C H+F +  I k l   ++ +CP   C+
  MMETSP1325-20131115|2763_1 14 ISDLQRKVNCPILKDKPKEVV-LIRCGHTFSRACIDKRL-ADRMRRCPS--CN 62
                566667788999888888755.457**************.9999****9..86 PP

>> PF13719.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.18   1.3e+02      19      29 ..      14      24 ..       8      25 .. 0.83
   2 ?    2.6   0.0      0.13        90      30      35 ..      37      42 ..      29      43 .. 0.80
   3 !    7.9   0.1     0.003         2       4      13 ..      57      66 ..      55      71 .. 0.81

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.18
   PF13719.1 19 ippkgrkvrCs 29
                i++ +rkv C+
  MMETSP1325-20131115|2763_1 14 ISDLQRKVNCP 24
                7788999*998 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.13
   PF13719.1 30 kCghvf 35
                +Cgh+f
  MMETSP1325-20131115|2763_1 37 RCGHTF 42
                688888 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.003
   PF13719.1  4 eCpnCkakye 13
                +Cp+C++ + 
  MMETSP1325-20131115|2763_1 57 RCPSCNKGFS 66
                7999999885 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   1.7e-05     0.012      46      82 ..      32      66 ..      13      69 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.7e-05
   PF12861.2 46 plvlGkckhnfhlhcilkwletetskglcpmcrqtfk 82
                 +vl +c h+f   ci k l+ +    +cp c + f+
  MMETSP1325-20131115|2763_1 32 EVVLIRCGHTFSRACIDKRLADRM--RRCPSCNKGFS 66
                578999*************98765..67***998775 PP

>> PF13717.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.32   2.2e+02      19      29 ..      14      24 ..      10      25 .. 0.81
   2 ?    2.7   0.0      0.14        95      30      35 ..      37      42 ..      30      43 .. 0.81
   3 !    8.0   0.1     0.003       2.1       4      13 ..      57      66 ..      55      71 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.32
   PF13717.1 19 ippkgrkvrCs 29
                i++  rkv C+
  MMETSP1325-20131115|2763_1 14 ISDLQRKVNCP 24
                67788999997 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.14
   PF13717.1 30 kCghvf 35
                +Cgh+f
  MMETSP1325-20131115|2763_1 37 RCGHTF 42
                688888 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.003
   PF13717.1  4 eCpnCkakye 13
                +Cp+C++ + 
  MMETSP1325-20131115|2763_1 57 RCPSCNKGFS 66
                7999999886 PP

>> PF14447.1  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.8   0.00012     0.082      14      53 ..      27      69 ..      12      71 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00012
   PF14447.1 14 gtvgtkrvllpCgHlvpdetFd...lerYsgCPfCgtrletds 53
                +  ++  vl  CgH   +++ d    +r   CP C++ +++d+
  MMETSP1325-20131115|2763_1 27 KDKPKEVVLIRCGHTFSRACIDkrlADRMRRCPSCNKGFSNDD 69
                45567778999***********5544799********999987 PP

>> PF06906.6  Protein of unknown function (DUF1272)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   0.00013     0.087      25      51 ..      36      65 ..      17      71 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00013
   PF06906.6 25 CsfEcTfCadCaeell...eevCPncgGel 51
                    +Tf ++C +++l    ++CP c+ ++
  MMETSP1325-20131115|2763_1 36 IRCGHTFSRACIDKRLadrMRRCPSCNKGF 65
                45568**********9443468****9776 PP

>> PF09297.6  NADH pyrophosphatase zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       1.3   9.1e+02       8      11 ..      37      40 ..      37      44 .. 0.68
   2 ?   11.2   0.2   0.00027      0.19      18      28 ..      52      62 ..      48      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 1.3
   PF09297.6  8 rCGa 11
                rCG+
  MMETSP1325-20131115|2763_1 37 RCGH 40
                5665 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00027
   PF09297.6 18 ggwarvCpsCg 28
                ++++r+CpsC+
  MMETSP1325-20131115|2763_1 52 ADRMRRCPSCN 62
                789*******8 PP

>> PF14446.1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.037        25      20      38 ..      31      49 ..      18      52 .. 0.78
   2 ?    7.7   0.1    0.0036       2.4       5      20 ..      55      69 ..      51      71 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.037
   PF14446.1 20 divvCpeCgapyHreCwee 38
                  vv  +Cg ++ r C ++
  MMETSP1325-20131115|2763_1 31 KEVVLIRCGHTFSRACIDK 49
                5566679*********965 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0036
   PF14446.1  5 ktrCavCgkklkdkdd 20
                  rC+ C+k +  +dd
  MMETSP1325-20131115|2763_1 55 MRRCPSCNKGFS-NDD 69
                579********5.666 PP

>> PF10571.4  Uncharacterised protein family UPF0547
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.043        30      20      25 ..      38      43 ..      37      44 .. 0.86
   2 ?    7.7   0.0    0.0035       2.4      13      22 ..      54      63 ..      48      67 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.043
   PF10571.4 20 CGhvFa 25
                CGh F+
  MMETSP1325-20131115|2763_1 38 CGHTFS 43
                ****96 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0035
   PF10571.4 13 aakrCphCGh 22
                 ++rCp C  
  MMETSP1325-20131115|2763_1 54 RMRRCPSCNK 63
                5789999975 PP

>> PF13465.1  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0         5   3.4e+03      13      18 ..      19      24 ..      18      25 .. 0.74
   2 ?   -0.9   0.0       3.1   2.1e+03      20      25 ..      38      43 ..      29      44 .. 0.84
   3 ?   10.6   0.2   0.00071      0.49      16      26 .]      57      67 ..      45      67 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 5
   PF13465.1 13 kpyeCp 18
                +++ Cp
  MMETSP1325-20131115|2763_1 19 RKVNCP 24
                678999 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 3.1
   PF13465.1 20 CgktFk 25
                Cg tF+
  MMETSP1325-20131115|2763_1 38 CGHTFS 43
                888987 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 0.00071
   PF13465.1 16 eCplCgktFkt 26
                 Cp C+k F++
  MMETSP1325-20131115|2763_1 57 RCPSCNKGFSN 67
                6********97 PP

>> PF13894.1  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.3     0.039        27       5      14 ..      37      46 ..      22      57 .. 0.76
   2 ?    9.0   0.5    0.0026       1.8       2      12 ..      57      67 ..      56      71 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.039
   PF13894.1  5 lCgktFttre 14
                +Cg+tF++++
  MMETSP1325-20131115|2763_1 37 RCGHTFSRAC 46
                4******974 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0026
   PF13894.1  2 aCplCgktFtt 12
                +Cp C+k F++
  MMETSP1325-20131115|2763_1 57 RCPSCNKGFSN 67
                6********98 PP

>> PF14369.1  zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       8.4   5.7e+03      21      25 ..      20      24 ..      13      25 .. 0.57
   2 ?    9.3   1.3    0.0014      0.99      21      31 ..      55      65 ..      37      65 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 8.4
   PF14369.1 21 dvlCP 25
                 v CP
  MMETSP1325-20131115|2763_1 20 KVNCP 24
                34488 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0014
   PF14369.1 21 dvlCPhCgggF 31
                   CP+C+ gF
  MMETSP1325-20131115|2763_1 55 MRRCPSCNKGF 65
                446*******9 PP

>> PF00096.21  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.5      0.35   2.4e+02       6      12 ..      38      44 ..      37      46 .. 0.89
   2 ?    7.9   0.4    0.0057       3.9       2      12 ..      57      67 ..      57      69 .. 0.90

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.35
                ---EESS CS
  PF00096.21  6 CgksFsr 12
                Cg +Fsr
  MMETSP1325-20131115|2763_1 38 CGHTFSR 44
                ******9 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0057
                E------EESS CS
  PF00096.21  2 qCpdCgksFsr 12
                +Cp C+k Fs+
  MMETSP1325-20131115|2763_1 57 RCPSCNKGFSN 67
                6********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 341.70
//
Query:       MMETSP1325-20131115|2765_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-09   37.8   0.0    1.9e-09   37.2   0.0    1.3  1  PF12695.2  Alpha/beta hydrolase family
    6.6e-09   35.6   0.0    7.5e-07   28.9   0.0    2.2  1  PF05728.7  Uncharacterised protein family (UPF0227)
    7.1e-09   35.7   3.2    2.9e-07   30.4   1.5    2.6  2  PF12697.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.044   13.8   0.0      0.074   13.1   0.0    1.5  1  PF00975.15 Thioesterase domain
      0.063   12.7   0.0        1.3    8.3   0.0    2.4  2  PF00561.15 alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   7.1e-13   1.9e-09       4     141 ..     104     287 ..     101     288 .. 0.63

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 7.1e-13
   PF12695.2   4 lvhGaggdssayeplaealakrgfavvavdlpghgas.egaa............aakrvl..................aadll..dleriilvGhSlGGgvalelagrddrvkglvllapf..pdgedlakltl......................pvllihGtrDgvvppeeaeklakalpgdaelvviegasH 141
                 +vhG  + + +y+  ++++ +r ++v+a+d+  +  +  +++                 +                   a  +  ++++ +lvG S GG+va++l+++       vl+ p    ++ +l +++                       ++ ++hGt+D+ +p e +++l +a +   +l ++eg+ H
  MMETSP1325-20131115|2765_1 104 FVHGLESGPGGYK--VQKMRER-CNVIAPDMGMSLWNpLRENslvrnlfklrwpS----MrealadsfescvavqreaLA--HpdGARPTVLVGSSWGGAVAAALVAEGTWRGPTVLMCPAlaERERKLGEIEGrqelstahitaslaalpdalkrQCIVVHGTADETIPLEDSRALCEATG--IRLREVEGGRH 287
                 6677777666666..3455544.78888876555555433333333344444442....033335666666666543224..15699********************6555556666666422113333333334444444446666666666667*********************99988..68********9 PP

>> PF05728.7  Uncharacterised protein family (UPF0227)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   2.7e-10   7.5e-07       4     175 ..     104     292 ..     101     293 .] 0.67

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 2.7e-10
   PF05728.7   4 YlHGFdSSPlshkaqllsqfiaedvlaielsvlklke..............dpqqal.keleklvaelgddn.........illvGssLGGyyatrlgerfglrq..vllnPalkplenlagklgeeavqstqetyvleeyhii.elkalelsrlkrperilvllskqDevldy..rravaefraaaeiveddgdHafkdv 175
                 ++HG +S P+ +k q++ ++++ + +++ +s  ++                ++++al    e+ va  ++ +          +lvGss GG +a+ l +    r   vl+ Pal+  e   g ++         + +l   hi  +l+al+      + +++v+++++De+++   +ra+ e   ++ +  ++g H+++ +
  MMETSP1325-20131115|2765_1 104 FVHGLESGPGGYKVQKMRERCNVIAPDMGMSLWNPLRenslvrnlfklrwpSMREALaDSFESCVAVQRE-AlahpdgarpTVLVGSSWGGAVAAALVAEGTWRGptVLMCPALAERERKLGEIEG--------RQELSTAHITaSLAALP---DALKRQCIVVHGTADETIPLedSRALCEATGIRLREVEGGRHGLSTF 292
                 6899999999999999999999999999888766533111111111111113333331344555544333.146667788899**************9988877667*******988764444433........33455555540444444...445668************99667788888888888889999999876 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.34   9.2e+02       7       7 ..     108     108 ..      24     165 .. 0.58
   2 !   30.4   1.5   1.1e-10   2.9e-07      44     217 ..     159     289 ..     102     291 .. 0.71

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.34
                 - CS
   PF12697.2   7 l 7  
                 l
  MMETSP1325-20131115|2765_1 108 L 108
                 1 PP

  == domain 2    score: 30.4 bits;  conditional E-value: 1.1e-10
                 ..S--HHHHHHHHHHHHHH--..--EEEE--------HHHHHH----.EEE.EEEE------STT---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH--GGGG....GG------HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTTEEEEE---SSSS- CS
   PF12697.2  44 ydpdtledlaadlaalldalgl.rpvvlvGHSlGgavalaaaarrpdlvrg.lvlidppgplpasalrpagpsllrrllagraaalrdlaarafarlfdgdelealvradaaalaellraalldadlrealarldvPvlviageaDrvvppeearrlaealpgarvvvlpgagHll 217
                 + +d++e  +a  +++l++ ++ rp vlvG S+Ggava+a++a+  +  rg  vl++p++                     r++ l  +++r            +l +a          +    a+l+++  +l+  + v++g+aD+++p e+ r+l e + g r+ +++g+ H l
  MMETSP1325-20131115|2765_1 159 ALADSFESCVAVQREALAHPDGaRPTVLVGSSWGGAVAAALVAE--GTWRGpTVLMCPAL-------A------------ERERKLGEIEGRQ-----------ELSTA----------H--ITASLAALPDALKRQCIVVHGTADETIPLEDSRALCE-ATGIRLREVEGGRHGL 289
                 345778888888899999966669****************9997..44555369*****9.......4............2333333333221...........22111..........3..566677777777899*********************7.78************75 PP

>> PF00975.15  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.7e-05     0.074      29      86 ..     147     202 ..     134     260 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.7e-05
                 EEEECCSTTC----TTTTHHHHHHHHHHHHHHHH--S-SEEEE------HHHHHHHHH CS
  PF00975.15  29 eflaiqlpgrerdepllesieelaeeyaealrqiqpegPyaLfGySlGGllAfevArq 86 
                  ++ +++p +   e+l++s+e+ ++ + eal   +   P +L+G S GG +A ++ ++
  MMETSP1325-20131115|2765_1 147 NLFKLRWPSM--REALADSFESCVAVQREALAHPDGARPTVLVGSSWGGAVAAALVAE 202
                 5666777888..59**************************************887765 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00049       1.3      45      64 ..     181     202 ..     161     204 .. 0.77
   2 ?    1.5   0.0     0.062   1.7e+02     174     214 ..     248     287 ..     224     290 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00049
                 S..EEEEE-B---HHHHHHHHH CS
  PF00561.15  45 k..ltlvGhSmGGmialayaae 64 
                     +lvG S+GG+ a+a+ ae
  MMETSP1325-20131115|2765_1 181 ArpTVLVGSSWGGAVAAALVAE 202
                 34599*************9986 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.062
                 -TSSEEEEECCTTSCCHHCHHHHHHHCSTTEEEEEETTHHC CS
  PF00561.15 174 ilvptlvisgtdDplvpykaseklaelipksqlvvidgpgH 214
                  + + +v++gt D ++p+++s++l+e+++ ++l++++g+ H
  MMETSP1325-20131115|2765_1 248 LKRQCIVVHGTADETIPLEDSRALCEATG-IRLREVEGGRH 287
                 5667789****************888875.44555555455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.52
# Mc/sec: 1350.26
//
Query:       MMETSP1325-20131115|2767_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 536.96
//
Query:       MMETSP1325-20131115|2768_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-08   33.9   1.3      2e-05   24.2   0.1    2.4  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1   0.00011       1.5       7      26 ..      12      31 ..       6      36 .. 0.77
   2 !   24.2   0.1   1.4e-09     2e-05       9      38 ..     100     130 ..      93     131 .] 0.94

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00011
                EESSSSSEEEEEEESSSTEE CS
  PF00400.27  7 lrgHtspVtcvafspdgpll 26
                 r+H + V+c++f    +ll
  MMETSP1325-20131115|2768_1 12 SRHHDGYVSCIRFTSANSLL 31
                589**********9885554 PP

  == domain 2    score: 24.2 bits;  conditional E-value: 1.4e-09
                 SSSSSEEEEEEESS.STEEEEEETTSEEEEE CS
  PF00400.27   9 gHtspVtcvafspd.gpllasgSrDgtirlW 38 
                 +H + V cv  sp+ +++l+s+++D  +++W
  MMETSP1325-20131115|2768_1 100 AHAHDVMCVQLSPTdPNVLVSSGCDAMVKMW 130
                 8****************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 570.77
//
Query:       MMETSP1325-20131115|2770_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|2771_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.5e-05   21.9   0.0    5.9e-05   21.8   0.0    1.0  1  PF14249.1 Tocopherol cyclase


Domain annotation for each model (and alignments):
>> PF14249.1  Tocopherol cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   4.3e-09   5.9e-05     287     336 .]       3      56 ..       1      56 [. 0.87

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 4.3e-09
   PF14249.1 287 lrapteeglaflCrdtlkgelklelkerkgskgk....vilkaksslaglevGG 336
                 +  pt++g++ + r+  +g+l+l+l +r+gs g+    ++l+a+s  a levGG
  MMETSP1325-20131115|2771_1   3 VLCPTNDGMRDVAREDNSGNLRLRLYQRRGSGGSgppvLMLNATSMSAVLEVGG 56 
                 778************************99877643333789************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 278.85
//
Query:       MMETSP1325-20131115|2772_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 1092.74
//
Query:       MMETSP1325-20131115|2761_1  [L=1611]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-15   54.5   2.2    4.9e-06   26.5   0.0    4.4  4  PF00169.24 PH domain
    3.6e-14   52.7   1.7    8.3e-14   51.5   1.2    1.7  1  PF00615.14 Regulator of G protein signaling domain
    1.1e-08   33.9   0.6    2.2e-08   32.9   0.4    1.4  1  PF09423.5  PhoD-like phosphatase
      8e-06   25.5   0.0       0.36   10.6   0.0    4.6  5  PF13180.1  PDZ domain
    1.8e-05   24.1   0.2    5.4e-05   22.5   0.1    1.9  1  PF00149.23 Calcineurin-like phosphoesterase
      0.002   18.1   0.0      0.038   14.0   0.0    2.7  3  PF00595.19 PDZ domain (Also known as DHR or GLGF)


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   2.1e-09   4.9e-06      11     101 ..     477     569 ..     467     572 .. 0.87
   2 ?   -2.8   0.1       2.9   6.6e+03      65     101 ..     649     689 ..     606     691 .. 0.63
   3 ?    1.5   0.0      0.13     3e+02      12      52 ..    1358    1399 ..    1336    1446 .. 0.75
   4 !   22.1   0.1   5.3e-08   0.00012       2     102 ..    1466    1555 ..    1465    1557 .. 0.86

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 2.1e-09
                 E..........TSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHH CS
  PF00169.24  11 s..........ellktwkkryfvLtsnyLlyfksskkksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalkn 101
                 +          ++   w+  +++L + +L  ++ ++   + +    i l+   +++  +++     + s ++f + + ++ ++l+++ s+ ++++Wv+a++n
  MMETSP1325-20131115|2761_1 477 GmldyskassdGRAHDWRAAWCMLSGARLWHCRAQD---SCRCLAYITLDANvKIEAHPEN-----SGSGHVFGVLTGKE-THLFKTHSDNDLHQWVYAIMN 569
                 344444477888999*********************...8*********998899999999.....7************9.*******************98 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 2.9
                 TTSSSSEEEEEETTT....CEEEEEESSHHHHHHHHHHHHH CS
  PF00169.24  65 qkesnnyfeitfkdv....esyllsaeseeerkrWvqalkn 101
                 + +s++y+ +t+ ++     + +  a +++ rkrW   l++
  MMETSP1325-20131115|2761_1 649 EHSSEIYVFWTHSEHfsrmYEMKKVALNPKCRKRWRIRLQK 689
                 55666777777777666444444457777888888877775 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.13
                  TSSSCEEEEEEEEET.....TEEEEESSSSTTCECSECEEEECGGE CS
  PF00169.24   12 ellktwkkryfvLts.....nyLlyfksskkksykapkgsiplndc 52  
                  e++ + +kry+vL       + Ll+f++ +    +a  +++ ++++
  MMETSP1325-20131115|2761_1 1358 EKENQMTKRYLVLLKsnnkgGELLFFDPVS----SACSHVVRMKYV 1399
                  7889999*****999899999999999997....566666655555 PP

  == domain 4    score: 22.1 bits;  conditional E-value: 5.3e-08
                  SBEEEEEEEETSSSCEEEEEEEEET.....TEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24    2 ikeGyllkksellktwkkryfvLts.....nyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102 
                  i eG+l k+++ +   ++r+f L +     + L yfk+++     + kg+i+  + +   a+         s n+f + ++++ ++ l aes+ erk+W++al+ l
  MMETSP1325-20131115|2761_1 1466 IFEGFLAKRGNYNTANRRRWFQLLTtqdgeHLLRYFKEET----REIKGTIS--GFSEVCAE---------SGNSFAVLTPER-KFTLTAESDAERKAWMEALCPL 1555
                  789********************99999999999999998....79999886..44333333.........3489********.*******************865 PP

>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   1.2   3.7e-17   8.3e-14       1     118 []     628     761 ..     628     761 .. 0.94

  Alignments for each domain:
  == domain 1    score: 51.5 bits;  conditional E-value: 3.7e-17
                 -HHHHHTSS---HHHHHHHHTTTTHHHHHHHHHHHHHCTS..............--HHHHHHHHHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS....--TTTTHHHHHHHHHHHTTHHHHHHHCSHHHHHH CS
  PF00615.14   1 sleslledqpgrslFreFlesefseenleFwlaveefkka..............keqeelskkakeIynkylapsspkelnidkklreeleknleka..qpsrklfeeaqeevfrllekdsypkFlkselylrl 118
                 s+e ll++ ++r+ F+ Fle+e+s+e   Fw + e+f ++              + +  l+k+a++Iy+ +++ ++p e+  +  +r+e+ek l     +  ++lfe++q++ ++ l k++y +F+ +  y+++
  MMETSP1325-20131115|2761_1 628 SFEGLLKTRALREQFERFLEKEHSSEIYVFWTHSEHFSRMyemkkvalnpkcrkRWRIRLQKQARKIYEDFVQANAPLEISANATVRSEIEKVLGVPrrSVPKDLFEDLQRSSLDELIKSQYIQFVLDSNYKTM 761
                 6899**********************************************9986666777888*****************************99987778899***********************99999875 PP

>> PF09423.5  PhoD-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.4   9.7e-12   2.2e-08      35     149 ..     136     256 ..     119     282 .. 0.78

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 9.7e-12
   PF09423.5  35 vewevaedeefkrvvrsgtvlatserdytvkvevtgLepgqeyfYrfraeegesespvGrtrTlppeaavdslrlavvSCsnyeqGy......fnayrelaekedlDfvlhlGDyiYeyg....e 149
                 v+w  +  +++++  + +t++  +e  y   + ++gL+pg++y+Y+    + +s s++ +++T  +++a + l+ avv+++   + +       +  +++a+ +++Df  +lGD+ Y++     +
  MMETSP1325-20131115|2761_1 136 VRWGTSA-SDMSNTEAGSTNWYYEEGSYNHVAVLSGLSPGTTYWYQAGDSSVDSYSETFSFTTP-KATADSPLKVAVVGDMGR-AQFesgdviASLSSHAAN-NSYDFLWFLGDIGYADDsfihS 256
                 5555554.56777888888999*************************98777999999999999.7776677********965.335566684455555555.7**************9755541 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0     0.007        16      20      56 ..     207     243 ..     193     252 .. 0.86
   2 ?   -2.5   0.0       1.9   4.3e+03      40      79 ..     849     889 ..     846     892 .. 0.79
   3 ?   -0.5   0.0      0.47   1.1e+03      34      64 ..     922     953 ..     914     955 .. 0.82
   4 !   10.6   0.0   0.00016      0.36       9      55 ..     980    1021 ..     972    1027 .. 0.81
   5 ?    2.3   0.0      0.06   1.4e+02      15      56 ..    1079    1120 ..    1065    1127 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.007
   PF13180.1  20 sVkessPaakaglkpGDiilkvdgkkvksltdlksll 56 
                 +V+  ++  +a++ +GD+i ++  ++ +++ d+ + l
  MMETSP1325-20131115|2761_1 207 KVAVVGDMGRAQFESGDVIASLSSHAANNSYDFLWFL 243
                 588899999*****************99999988766 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.9
   PF13180.1  40 kvdgkkvksltdlkslllkkkpGdtvkltvlR.dgkkktve 79 
                  ++g++ ++++ l s + +  +G   +  v++   k+++v+
  MMETSP1325-20131115|2761_1 849 DIQGNRSTTGSRLGSSIVHLPVGRHHRMSVSHaPVKERKVK 889
                 6899999999*************999999998544555555 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.47
   PF13180.1  34 pGDiilkvdgkkvksltdlkslll.kkkpGdt 64 
                 pG  i +v+g+k+++ ++++ +l+  +++Gdt
  MMETSP1325-20131115|2761_1 922 PGWFIESVNGEKMNTPREMHARLAdLAEVGDT 953
                 5556889*************999977778876 PP

  == domain 4    score: 10.6 bits;  conditional E-value: 0.00016
   PF13180.1    9 qlentrgvlvvsVkessPaakaglkpGDiilkvdgkkvksltdlksl 55  
                  q      + +  V  ++ a k g+kpG  i++v+g+k++s ++ + +
  MMETSP1325-20131115|2761_1  980 Q-----DLEISAVVMEGQAYKCGIKPGWAIMAVNGEKINSIDHWQFK 1021
                  3.....4569999*************************998876655 PP

  == domain 5    score: 2.3 bits;  conditional E-value: 0.06
   PF13180.1   15 gvlvvsVkessPaakaglkpGDiilkvdgkkvksltdlksll 56  
                   + v++V+  + a++  +++G i+++v+++ ++s+++++ ++
  MMETSP1325-20131115|2761_1 1079 SLQVTHVNGLGQAHEICIQTGWIVVAVNDVLISSRAEYEAAV 1120
                  57788899999999999******************9998765 PP

>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   2.4e-08   5.4e-05       2      79 ..     207     295 ..     206     399 .. 0.85

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.4e-08
                 EEEEEEEBTBBHHHHHH.HHHHHHHHHHHTTTSEEEEE-TTSSGHHCHHHHHHHHH...........HCCHHHHTTSCEEEE---TTTHH CS
  PF00149.23   2 rilvigDlHgglddleg.lllilleiaaeekpdlvlflGDlvdrgdwssetlalld...........ylvlklllpipvfllrGNHEsdp 79 
                 +++v+gD++    ++ g +   l  +aa++  d+++flGD+ +++d +++   +++            + +++++ +p ++l+GNHE  +
  MMETSP1325-20131115|2761_1 207 KVAVVGDMGRAQFES-GdVIASLSSHAANNSYDFLWFLGDIGYADDSFIHSGSYVQfdyenaynefmDQIEPFAATKPMMVLPGNHEAEC 295
                 667777776555444.23667788899************************************************************876 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.7   3.9e+03      43      66 ..     920     943 ..     916     946 .. 0.79
   2 !   14.0   0.0   1.7e-05     0.038      24      66 ..     979    1021 ..     964    1028 .. 0.74
   3 ?   -0.2   0.0      0.44     1e+03      25      67 ..    1078    1121 ..    1062    1127 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 1.7
                 BSTTCEEEEETTEBGTTSHHHHHH CS
  PF00595.19  43 lkeGDkIlsvNgvdvenvshdeav 66 
                 +++G  I svNg+++++ ++++a 
  MMETSP1325-20131115|2761_1 920 ISPGWFIESVNGEKMNTPREMHAR 943
                 666777889*****9999888876 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 1.7e-05
                  SSSEEEEESTTT.HHTTTTSBSTTCEEEEETTEBGTTSHHHHHH CS
  PF00595.19   24 dkgifvsevvpg.gaaeagglkeGDkIlsvNgvdvenvshdeav 66  
                  d+ + +s vv    a ++g +k+G  I++vNg++++++ h + +
  MMETSP1325-20131115|2761_1  979 DQDLEISAVVMEgQAYKCG-IKPGWAIMAVNGEKINSIDHWQFK 1021
                  5567777776663666777.*****************9997655 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.44
                  SSEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTS.HHHHHHH CS
  PF00595.19   25 kgifvsevvpggaaeagglkeGDkIlsvNgvdvenv.shdeavq 67  
                   ++ v++v+  g a+   ++ G ++++vN+v +++  + + av+
  MMETSP1325-20131115|2761_1 1078 DSLQVTHVNGLGQAHEICIQTGWIVVAVNDVLISSRaEYEAAVK 1121
                  477888888778888878*************9999834455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1611 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 2.09u 0.38s 00:00:02.46 Elapsed: 00:00:00.93
# Mc/sec: 4151.11
//
Query:       MMETSP1325-20131115|2769_1  [L=918]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-07   29.9   0.0    4.5e-07   28.9   0.0    1.5  1  PF01167.13 Tub family
    0.00023   20.8   0.0    0.00059   19.5   0.0    1.6  1  PF13180.1  PDZ domain


Domain annotation for each model (and alignments):
>> PF01167.13  Tub family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   6.6e-11   4.5e-07       2     240 ..     587     830 ..     586     837 .. 0.68

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 6.6e-11
  PF01167.13   2 aprdalvqCfikrdkskldkglyltlslaleeekg.....kfLLaarkrkrskttnyli.sl...dakdlsr.sseayigklrsnllgtkfivyDtgqnekkaklv...spkvasgrqelaavsyelnvLGtrGPrrmtvilpsieasaeeeggrvpvqplneeqeslleeeqkkkkesllvLknkaPrWneelqsyvLnf.rGrvtvasvknfqlvaase..pdkivlqfGkv.akdvftmDyryPlsalqafai 240
                 +p + +v+  + rd+++++k   + + ++ ++ ++       ++a+r+ + +  + y i  l   +  d+ r ++ +y+gklr  +l+++  v  ++  +k +  v   s+++ +  +++ +   e  +L +r   + +v+lp i+         v+++ +    +s +++ ++   +s   ++   P+ +e   sy+L f   r+ v s kn  l  +++   d +vlqfGk  ++d + +D r P++++q +a 
  MMETSP1325-20131115|2769_1 587 GPDEPMVRYLLMRDRRGMRKF-NPEYLMYRQRGNRrgaeeLVMMAKRRGHVTGGASYYInNLeggNGGDIVRkKAPNYCGKLR--VLSSRVHVMLNNMVSKGELGViiySSNTYNDDEQMEHGFDEHSLL-SRQSVKPSVVLPPIDDGGM----AVAIENAA-GADSAIANARHAYGNS--HFERIQPQLDER-LSYALPFvDDRIEVKSRKNICLHRRDHgaGDSVVLQFGKArGEDRYHLDVRAPFTPFQDYAS 830
                 788999***********9874.444444444433333442445555555555555555514422244566551789******9..788888777666665554433455777777777777766666655.6778899*****9997776....66666666.4444555555444444..456778998766.58***99457**********99877652269********768****************9984 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   8.6e-08   0.00059      13      56 ..      63     106 ..      49     113 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 8.6e-08
   PF13180.1  13 trgvlvvsVkessPaakaglkpGDiilkvdgkkvksltdlksll 56 
                 +r +++  V++++ a +ag+ +G  i +vdg++v++++d+  ++
  MMETSP1325-20131115|2769_1  63 ARDLTILRVDPNTQAYRAGVVVGSRIASVDGIRVSNQDDFSAAM 106
                 57899********************************9998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (918 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.27u 0.36s 00:00:01.63 Elapsed: 00:00:00.65
# Mc/sec: 3384.39
//
Query:       MMETSP1325-20131115|2774_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   15.2   0.0       0.03   14.1   0.0    1.5  1  PF03828.14 Cid1 family poly A polymerase


Domain annotation for each model (and alignments):
>> PF03828.14  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.2e-06      0.03       3      57 ..      31      81 ..      29      82 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.2e-06
                --HHHHHHHH--------SEEB-------EEGGG-GGG-S-.S-SSS--BB---- CS
  PF03828.14  3 geLLigFFeyYgseFdyenvvisirtggilskkekgwesnkernrfllaIeDPfe 57
                g LL++F e  + + dy+++  +   g   + ++++     +rn   + ++DPf+
  MMETSP1325-20131115|2774_1 31 GKLLLEFCEQHACHLDYSQMSFCAQLGY--TARDMNNA--TQRNAAGMFVQDPFD 81
                99*****************999997777..67777777..679***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 953.55
//
Query:       MMETSP1325-20131115|2776_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|2780_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 298.32
//
Query:       MMETSP1325-20131115|2778_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-12   46.5   0.1    5.6e-12   45.7   0.1    1.4  1  PF01399.22 PCI domain
  ------ inclusion threshold ------
       0.08   12.3   0.0      0.091   12.1   0.0    1.2  1  PF07421.6  Neurotensin/neuromedin N precursor


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.1   8.1e-16   5.6e-12      40     103 ..      39     102 ..       5     103 .] 0.81

  Alignments for each domain:
  == domain 1    score: 45.7 bits;  conditional E-value: 8.1e-16
                 ----HHHHHHHHHHHHHS-SEE-TTT----SSS-HHHHHHHHHHHHH-------B-S----EE- CS
  PF01399.22  40 esLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIadgelrakidqpsgivvf 103
                 + ++ ++r+ ++++++  ++ i+++++a++ld+s devE ++v+ I +++++ak+dq +++v +
  MMETSP1325-20131115|2778_1  39 DACVSNMRLLTMCSLATEHDEIPYQTVADTLDVSIDEVEMWVVNTITSKLIDAKMDQLQKVVLI 102
                 77999*****************************************************999865 PP

>> PF07421.6  Neurotensin/neuromedin N precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.3e-05     0.091      74     129 ..      15      69 ..      11      98 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.3e-05
   PF07421.6  74 agelrdddlvakrklplvldgfslealltifqlqkicrsrafqhweiiqedildag 129
                  g+l+d    ak  lp+vldg   +a ++ ++l  +c s a +h ei  + + d+ 
  MMETSP1325-20131115|2778_1  15 VGKLHDYTEFAKGGLPAVLDGVDPDACVSNMRLLTMC-SLATEHDEIPYQTVADTL 69 
                 6999*********************************.789999999766554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|2775_1  [L=604]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-09   36.6   0.0     0.0029   17.3   0.0    2.4  2  PF13641.1  Glycosyltransferase like family 2
      3e-07   30.1   0.2    4.6e-05   23.0   0.0    2.4  2  PF00535.21 Glycosyl transferase family 2
  ------ inclusion threshold ------
      0.045   12.2   0.1      0.066   11.6   0.0    1.2  1  PF06548.6  Kinesin-related


Domain annotation for each model (and alignments):
>> PF13641.1  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   6.4e-07    0.0029       1      48 [.     263     312 ..     263     335 .. 0.91
   2 !   16.7   0.0   9.5e-07    0.0044      70     125 ..     413     469 ..     399     505 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 6.4e-07
   PF13641.1   1 prvavvvptlnedd.vlarvlesilaldy.aprlevivvvdgsdaetldv 48 
                 p v v+++ + e++ ++ ++++++l l+y +++l+++v++dg ++ t++v
  MMETSP1325-20131115|2775_1 263 PTVDVLICHYSEPAdDTMETVDAALDLEYpKDKLHIWVCDDGYCKSTFKV 312
                 6799*********99**************7788************99875 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 9.5e-07
   PF13641.1  70 pgptgkaralnealqa..iksdlvlllDaDsvvdpdtlrrllpfflskgvglvqgpvl 125
                   + +ka+++n+ l +  ++++++++lD D+ ++p +l+++lp+f + ++g ++g v+
  MMETSP1325-20131115|2775_1 413 KDHHAKAGNINNCLYNagAEGRYLIILDNDMQPHPKFLKATLPLF-YCKPGRLGGSVF 469
                 44559******99998444599***********************.777777777766 PP

>> PF00535.21  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0042        19       1      40 [.     266     308 ..     266     315 .. 0.90
   2 !   23.0   0.0     1e-08   4.6e-05      61     108 ..     412     461 ..     377     492 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0042
                 EEEEEESS-.TTTHHHHHHHHHT-..S---EEEEEEE-S--HH CS
  PF00535.21   1 sviiptyNe.ekylletlesllnq..typnfeiivvDDgStDe 40 
                 +v+i+ y e ++   et++++l+   + +++ i v+DDg   +
  MMETSP1325-20131115|2775_1 266 DVLICHYSEpADDTMETVDAALDLeyPKDKLHIWVCDDGYCKS 308
                 5899*********************9************97555 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 1e-08
                 HHS-.HHHHHHHHHHHH----..EEEEEETTEEE-TTHHHHHHHHHHH.-T CS
  PF00535.21  61 eknv.Gkagarnaglkkatgd..yilflDaDdepdpdwleklveklekdga 108
                 +k+   kag++n++l +a  +  y+++lD D++p+p++l+ ++  +   ++
  MMETSP1325-20131115|2775_1 412 TKDHhAKAGNINNCLYNAGAEgrYLIILDNDMQPHPKFLKATLPLFYC-KP 461
                 444449***********999999*****************99998877.44 PP

>> PF06548.6  Kinesin-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.4e-05     0.066     111     170 ..     520     575 ..     472     589 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.4e-05
   PF06548.6 111 irrekeleelCeeQaakIeqLnrlvqqykherecnalidqt...keekiarleslmdgvlske 170
                 + ++ +l e C +Qa++I++L       k+e+e n+l++ +   k  +++r++++ +++ +++
  MMETSP1325-20131115|2775_1 520 LDEQIKLRETCRNQAQEIRKL-------KQENEKNKLLGSYqpyKRGTKKREKKIFEASAPTD 575
                 678899***************.......999******98752226667778888888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       571  (0.0417642); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.01u 0.37s 00:00:01.38 Elapsed: 00:00:00.64
# Mc/sec: 2261.56
//
Query:       MMETSP1325-20131115|2781_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 752.46
//
Query:       MMETSP1325-20131115|2783_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-10   39.2   0.1       0.04   13.8   0.0    4.7  5  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
       0.03   14.2   0.0         25    5.2   0.0    3.2  3  PF00560.28 Leucine Rich Repeat
      0.046   13.2   0.0        2.2    7.8   0.0    2.6  2  PF12799.2  Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         2   9.1e+03      14      23 ..      54      63 ..      53      64 .. 0.83
   2 !    5.5   0.0    0.0044        20       4      23 ..      72      91 ..      69      92 .. 0.87
   3 !   10.8   0.0   8.6e-05      0.39       3      22 ..     100     119 ..      98     121 .. 0.88
   4 !   13.8   0.0   8.8e-06      0.04       4      23 ..     129     148 ..     127     149 .. 0.88
   5 ?    3.0   0.0     0.028   1.3e+02       3      18 ..     156     172 ..     155     178 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 2
   PF13516.1 14 igdeGlsaLa 23
                ig  G+s L+
  MMETSP1325-20131115|2783_1 54 IGAAGASVLG 63
                8999999886 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0044
   PF13516.1  4 LtsLdLsnNqigdeGlsaLa 23
                Lt+L L n  ig eG+ aL+
  MMETSP1325-20131115|2783_1 72 LTHLMLPNQRIGPEGAAALC 91
                8888888889*********9 PP

  == domain 3    score: 10.8 bits;  conditional E-value: 8.6e-05
   PF13516.1   3 nLtsLdLsnNqigdeGlsaL 22 
                 + t+LdL +N++ d G+ a 
  MMETSP1325-20131115|2783_1 100 SVTYLDLRSNGLMDAGARAV 119
                 5799*************985 PP

  == domain 4    score: 13.8 bits;  conditional E-value: 8.8e-06
   PF13516.1   4 LtsLdLsnNqigdeGlsaLa 23 
                 L+   L  N igdeG++aL+
  MMETSP1325-20131115|2783_1 129 LKIVSLEANRIGDEGAKALC 148
                 77778999***********8 PP

  == domain 5    score: 3.0 bits;  conditional E-value: 0.028
   PF13516.1   3 nLtsLdLsnNq.igdeG 18 
                 +L+ L Ls+N+ i+  G
  MMETSP1325-20131115|2783_1 156 CLQRLSLSQNHeITLAG 172
                 5999******8777655 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0056        25       2      13 ..     101     112 ..     100     124 .. 0.85
   2 ?   -0.8   0.0      0.54   2.5e+03       1      14 [.     128     141 ..     128     153 .. 0.77
   3 ?    4.7   0.0    0.0083        38       2      13 ..     157     169 ..     156     178 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0056
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                  ++LdL++N l 
  MMETSP1325-20131115|2783_1 101 VTYLDLRSNGLM 112
                 68*******985 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.54
                 TESEEEETSSBCBC CS
  PF00560.28   1 nLeeLdLsgNnlts 14 
                 +L++ +L  N++ +
  MMETSP1325-20131115|2783_1 128 KLKIVSLEANRIGD 141
                 69999999999974 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.0083
                 ESEEEETSS.BCB CS
  PF00560.28   2 LeeLdLsgN.nlt 13 
                 L++L+Ls N  +t
  MMETSP1325-20131115|2783_1 157 LQRLSLSQNhEIT 169
                 9********7776 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00048       2.2       3      38 ..     101     141 ..      99     151 .. 0.82
   2 ?    2.3   0.0     0.026   1.2e+02       3      12 ..     157     166 ..     155     172 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00048
   PF12799.2   3 LevLdLsnNnIkdlppe.lanL....pnLktLnLsnNpisd 38 
                  ++LdL++N + d ++  +a L    ++Lk  +L+ N+i d
  MMETSP1325-20131115|2783_1 101 VTYLDLRSNGLMDAGARaVADLlgtdRKLKIVSLEANRIGD 141
                 689********998874488887777799999999999987 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.026
   PF12799.2   3 LevLdLsnNn 12 
                 L+ L+Ls+N 
  MMETSP1325-20131115|2783_1 157 LQRLSLSQNH 166
                 7888888884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.30s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 1058.01
//
Query:       MMETSP1325-20131115|2782_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 914.53
//
Query:       MMETSP1325-20131115|2784_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 768.64
//
Query:       MMETSP1325-20131115|2785_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.7   0.0     0.0018   18.2   0.0    1.3  1  PF00249.26 Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.077   12.2   0.0       0.09   12.0   0.0    1.1  1  PF07183.6  Protein of unknown function (DUF1403)


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.6e-07    0.0018       4      41 ..      30      70 ..      28      71 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 2.6e-07
                S-HHHHHHHHHHHHHTTS-.......HHHHHHHCTTTS-HHHHH CS
  PF00249.26  4 WTteEdellvdavkqlGgg......tWktIartmgkgRtlkqck 41
                +  +E+++++++ +++G +       W  Ia  +    t+ +++
  MMETSP1325-20131115|2785_1 30 FDDDEHQRFLEGLQKFGAKtrlsgrEWQQIATAVS---TPTSVR 70
                7789**************************99887...565555 PP

>> PF07183.6  Protein of unknown function (DUF1403)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.3e-05      0.09     275     310 ..      20      55 ..      15      59 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.3e-05
   PF07183.6 275 avaasaklkklsdraarRLferLvelgavreLsGRp 310
                 a+aa+++     d   +R+ e L+++ga  +LsGR+
  MMETSP1325-20131115|2785_1  20 AMAATEHFRAFDDDEHQRFLEGLQKFGAKTRLSGRE 55 
                 88999999999999*********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 367.10
//
Query:       MMETSP1325-20131115|2786_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 390.98
//
Query:       MMETSP1325-20131115|2788_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.052   13.6   0.0      0.089   12.8   0.0    1.3  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)


Domain annotation for each model (and alignments):
>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.5e-06     0.089      10      60 ..      21      64 ..      16      79 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.5e-06
                SH---EEEESSTTSSSSEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTS CS
  PF00595.19 10 gglGfslkggsdkrdkgifvsevvpggaaeagglkeGDkIlsvNgvdvenv 60
                ++lG++l+       +g +v+ v+pgg  +a g+ +G kI+ v+ +dv ++
  MMETSP1325-20131115|2788_1 21 EKLGLTLS-------QGGVVQAVEPGGQGDAWGILPGSKIVTVGLEDVQGL 64
                56666666.......6*****************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 653.55
//
Query:       MMETSP1325-20131115|2789_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-22   79.0   0.0    2.5e-22   78.6   0.0    1.2  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase
  ------ inclusion threshold ------
       0.03   13.6   0.4      0.047   12.9   0.3    1.3  1  PF05757.6  Oxygen evolving enhancer protein 3 (PsbQ)
       0.12   12.2   1.9       0.46   10.5   0.5    2.3  2  PF10518.4  TAT (twin-arginine translocation) pathway signal sequence


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.6   0.0   5.4e-26   2.5e-22       3      76 ..      75     151 ..      73     152 .] 0.93

  Alignments for each domain:
  == domain 1    score: 78.6 bits;  conditional E-value: 5.4e-26
                 B---CT-EEEEEEEEEE.-....--EEEETTTTTCEEEEECCTTSS-HHHHHHHTTSBCTEEEEEEEEGGGT-S-TTC CS
  PF00254.23   3 kkakegdtVtvhyegkled....gtvfdssysrakpfefkvGsgqvikgleeglegmkvGekrtltippelaYgekgl 76 
                 + + +g+tV+vhy+g+l d    + +fdssy+r kp++f  G+g+vi+g++eg+++mkvG+k +++ip++ +Yg++g+
  MMETSP1325-20131115|2789_1  75 Q-PAPGQTVKVHYTGWLNDfddlDGKFDSSYDRRKPLSFAAGTGRVIQGWDEGILTMKVGGKSRFIIPSKIGYGSRGA 151
                 4.899************555578999************************************************9987 PP

>> PF05757.6  Oxygen evolving enhancer protein 3 (PsbQ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3     1e-05     0.047      12      58 ..       9      52 ..       4      72 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1e-05
                XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX-.-S CS
   PF05757.6 12 trrsglvvrasaeeaeqqtsRravlgslvAtalagaasaqavlaa.aa 58
                 +r++ + r s+  ++ + sRr v +  +A+a+a+++++ a++ a +a
  MMETSP1325-20131115|2789_1  9 MPRRAAALRMSS--EDSSLSRRGVFS--TAAAVAAISTQPAAVHAtPA 52
                567778888888..8899******77..77777777777777666223 PP

>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.5    0.0001      0.46       1      16 [.      24      39 ..      24      47 .. 0.91
   2 ?   -0.1   0.0      0.25   1.2e+03       2      15 ..     104     117 ..     103     117 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0001
   PF10518.4  1 rlsRRqfLkggaaaaA 16
                +lsRR ++ ++aa+aA
  MMETSP1325-20131115|2789_1 24 SLSRRGVFSTAAAVAA 39
                58*************9 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.25
   PF10518.4   2 lsRRqfLkggaaaa 15 
                 + RR  L ++a+++
  MMETSP1325-20131115|2789_1 104 YDRRKPLSFAAGTG 117
                 67888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.64
# Mc/sec: 569.13
//
Query:       MMETSP1325-20131115|2790_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|2787_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-28   97.4  13.9    7.6e-28   96.9   9.7    1.2  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
      0.045   13.4   5.7        1.1    9.0   0.2    2.4  2  PF05656.9  Protein of unknown function (DUF805)
       0.85    9.2   0.0       0.85    9.2   0.0    3.4  2  PF02687.16 FtsX-like permease family


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   9.7   1.7e-31   7.6e-28     151     395 ..       2     270 ..       1     275 [. 0.88

  Alignments for each domain:
  == domain 1    score: 96.9 bits;  conditional E-value: 1.7e-31
                 ----TTHHHHHH----------------..........--S--G...SBHHHHH---HHHH--------------SHHHHH...HHHHHHHHHHHHH-------TTT--------------------TTT------------------------CHHHHHHTS-HTTGG-----------------TTSTT--.............-----------..-HHHHHHHHHHHHHHH---TTT---HHHHHH---B-XHHHHHXXXHHHHXX CS
  PF00909.16 151 AgstvVHlvggvagLaaalvlgkregrfe.......gkeeaikg...hnlpfavlGtllLwfgWfgFNagsaltankrara..raavtTllAaaagaltallisrlkegkinvlglanGilAGlVAiTaacavvepwgAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv.............askisggllsgegkqlvvqligilvilayafvvtlilllllklllgLrvseeeeevglDvaehg 395
                 Ags+vVH++g++++L aa+++  r +r +       g + +i++   ++  f  +G++++ +  ++  a  +   ++  +a  ra+++Tll + ++ + a++i  + +g i+   +  G++AG++ i+++cavv+  gA+++G+++g+  +lg + l   + +dD+  ++++Hg+ Gi Gl+++g+f +++ +             +s+ +g l +g+  +  +q+ g+++i+a+a +v+++++ ++ l+ g r s+++ e g+D + +g
  MMETSP1325-20131115|2787_1   2 AGSGVVHATGAIVALSAAVIIESRLNRWTlsneadaGGKPEIQPkpqYSPAFEAFGCVIIFVTSLATTAFCVRRYTDDGAAvgRAMLNTLLCSGTASISACVIGHFYTGVISPQLAGGGLIAGIATISSGCAVVTAEGAFVMGFIGGIAYYLGGA-LLVNIYVDDVSHAISMHGFTGICGLIMTGLFTHPDFYdqvffdtrlhdwyESGCYGMLYNGGPTSTLAQAWGAMTIIAIAGTVSTVVFAIVWLTDGGRFSDKTLESGIDSTFFG 270
                 9**************************988866656444455542227899*********998887666555444444444569**********************************************************************7.**********************************98899**********77777776666666*******************************99999999999999988774 PP

>> PF05656.9  Protein of unknown function (DUF805)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.2   0.00024       1.1      42      82 ..      48      88 ..       6     153 .. 0.68
   2 ?    5.4   1.7    0.0031        14      46     101 ..     174     250 ..     139     266 .. 0.56

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00024
   PF05656.9 42 aaseslalllgllllalllptlavtvRRlHDtgrsgwwlll 82
                + s ++ ++  ++++++ l+t+a +vRR  D g     ++l
  MMETSP1325-20131115|2787_1 48 QYSPAFEAFGCVIIFVTSLATTAFCVRRYTDDGAAVGRAML 88
                445556667778888899999**********8866554444 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0031
   PF05656.9  46 slalllgllllalll.ptla...vtvRRlHDtgrsgwwlllll.............alliplvgl....lvllvlll 101
                 +++ + gl++  l+  p +        RlHD  +sg + +l+              +++i + g+    ++ +v+l+
  MMETSP1325-20131115|2787_1 174 GFTGICGLIMTGLFThPDFYdqvFFDTRLHDWYESGCYGMLYNggptstlaqawgaMTIIAIAGTvstvVFAIVWLT 250
                 333333333333333355443323337**********9999559999999999876444444444333244555655 PP

>> PF02687.16  FtsX-like permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00019      0.85      56     117 ..       9      77 ..       4      79 .. 0.81
   2 ?   -9.8  11.4         3   1.4e+04      48     103 ..      87     149 ..      83     251 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00019
  PF02687.16  56 liglllGlllglllaqllsqallk.......fnssslpisldpitlllilllilllallaallparril 117
                 + g++++l  ++++   l+++ l+       ++ ++++++++p+  +++ ++i++++l ++++ +rr++
  MMETSP1325-20131115|2787_1   9 ATGAIVALSAAVIIESRLNRWTLSneadaggKPEIQPKPQYSPAFEAFGCVIIFVTSLATTAFCVRRYT 77 
                 5567777777777777777777777877776666*******************************9975 PP

  == domain 2    score: -9.8 bits;  conditional E-value: 3
  PF02687.16  48 llealligliglllGlllglllaqllsqallk.......fnssslpisldpitlllilllill 103
                 +l++ll +  +++ ++++g + + ++s  l++        ++ss    ++ +  +++ +++ +
  MMETSP1325-20131115|2787_1  87 MLNTLLCSGTASISACVIGHFYTGVISPQLAGggliagiATISSGCAVVTAEGAFVMGFIGGI 149
                 567778888889999999999999999988885544444222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.53
# Mc/sec: 1419.73
//
Query:       MMETSP1325-20131115|2792_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.54
# Mc/sec: 1428.94
//
Query:       MMETSP1325-20131115|2793_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 217.45
//
Query:       MMETSP1325-20131115|2794_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-11   44.0   0.2    5.8e-05   22.5   0.1    3.6  3  PF12799.2  Leucine Rich repeats (2 copies)
      8e-09   34.2   3.2       0.05   13.5   0.1    5.4  5  PF00560.28 Leucine Rich Repeat
      6e-08   31.8   3.0       0.69   10.0   0.0    4.9  4  PF13516.1  Leucine Rich repeat
    5.6e-06   25.9   2.3       0.82    9.3   0.0    3.8  4  PF13855.1  Leucine rich repeat
    4.5e-05   22.8   7.0       0.63   10.3   0.0    5.1  4  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   2.1e-08   5.8e-05       2      36 ..      28      63 ..      27      71 .. 0.91
   2 !    8.8   0.0   0.00039       1.1       1      28 [.      74     102 ..      74     109 .. 0.89
   3 !    8.7   0.0   0.00042       1.1      22      38 ..     144     161 ..     125     167 .. 0.74

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.1e-08
   PF12799.2  2 nLevLdLsnNnIk..dlppelanLpnLktLnLsnNpi 36
                nL++LdL++++I    l + ++ + nL++L Ls ++i
  MMETSP1325-20131115|2794_1 28 NLTTLDLRYTSIDpdTLTH-VGHCINLEYLLLSKTRI 63
                9***********9867***.*************9998 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00039
   PF12799.2   1 tnLevLdLsnNn.Ik.dlppelanLpnLkt 28 
                 t+L++Ld ++++ +k +l+  l ++++L++
  MMETSP1325-20131115|2794_1  74 TQLRHLDVRECRrLKgELSD-LRRMTKLTH 102
                 78*********55**99***.******986 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.00042
   PF12799.2  22 nLpnLktLnLsnNp.isd 38 
                  ++nL++L+L++++ ++d
  MMETSP1325-20131115|2794_1 144 ECQNLRVLDLTRCReLTD 161
                 578999999999864666 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.2   3.2e+03       3       9 ..       6      12 ..       5      14 .. 0.86
   2 !    5.3   0.0     0.009        25       1      13 [.      28      40 ..      28      50 .. 0.84
   3 ?    2.4   0.1     0.077   2.1e+02       1      13 [.      52      64 ..      52      72 .. 0.86
   4 !    8.7   0.0   0.00069       1.9       1      19 [.      75      94 ..      75     107 .. 0.87
   5 !   13.5   0.1   1.8e-05      0.05       1      19 [.     147     168 ..     147     170 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 1.2
                SEEEETS CS
  PF00560.28  3 eeLdLsg 9 
                +++dLsg
  MMETSP1325-20131115|2794_1  6 QVIDLSG 12
                899**98 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.009
                TESEEEETSSBCB CS
  PF00560.28  1 nLeeLdLsgNnlt 13
                nL++LdL+++++ 
  MMETSP1325-20131115|2794_1 28 NLTTLDLRYTSID 40
                8*******99886 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.077
                TESEEEETSSBCB CS
  PF00560.28  1 nLeeLdLsgNnlt 13
                nLe+L Ls +++ 
  MMETSP1325-20131115|2794_1 52 NLEYLLLSKTRIH 64
                8*******99885 PP

  == domain 4    score: 8.7 bits;  conditional E-value: 0.00069
                TESEEEETSS.BCB.CHHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.slppsl 19
                +L++Ld++ + +l+ +l++ l
  MMETSP1325-20131115|2794_1 75 QLRHLDVRECrRLKgELSD-L 94
                69********999988877.5 PP

  == domain 5    score: 13.5 bits;  conditional E-value: 1.8e-05
                 TESEEEETSS.BCB.CHHHH.H CS
  PF00560.28   1 nLeeLdLsgN.nlt.slpps.l 19 
                 nL++LdL ++  lt  +p++ l
  MMETSP1325-20131115|2794_1 147 NLRVLDLTRCrELTdPIPEDlL 168
                 8*************66**9844 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00083       2.3       3      17 ..      28      42 ..      26      48 .. 0.87
   2 !    5.3   0.0    0.0083        23       1      16 [.      50      65 ..      50      68 .. 0.90
   3 ?    4.7   0.0     0.013        36       1      13 [.      73      85 ..      73      94 .. 0.83
   4 !   10.0   0.0   0.00025      0.69       1      20 [.     145     165 ..     145     168 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00083
   PF13516.1  3 nLtsLdLsnNqigde 17
                nLt+LdL ++ i+ +
  MMETSP1325-20131115|2794_1 28 NLTTLDLRYTSIDPD 42
                9*********99866 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.0083
   PF13516.1  1 lknLtsLdLsnNqigd 16
                + nL++L Ls++ i++
  MMETSP1325-20131115|2794_1 50 CINLEYLLLSKTRIHG 65
                78**********9975 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.013
   PF13516.1  1 lknLtsLdLsnNq 13
                +++L++Ld+  + 
  MMETSP1325-20131115|2794_1 73 CTQLRHLDVRECR 85
                99******99986 PP

  == domain 4    score: 10.0 bits;  conditional E-value: 0.00025
   PF13516.1   1 lknLtsLdLsnNq.igdeGls 20 
                 ++nL++LdL ++  ++d   +
  MMETSP1325-20131115|2794_1 145 CQNLRVLDLTRCReLTDPIPE 165
                 9***********889997765 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0003      0.82      28      61 .]       6      39 ..       3      39 .. 0.80
   2 !    8.3   0.3   0.00062       1.7      23      59 ..      49      84 ..      38      87 .. 0.79
   3 !    5.4   0.5    0.0049        13      26      59 ..      52      84 ..      52     107 .. 0.75
   4 !    5.4   0.0    0.0049        13      24      35 ..     145     157 ..     125     169 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0003
   PF13855.1 28 kvLdLsgnnlksisp.eafkgLpsLreLnLsgNrl 61
                +v+dLs  + k++ +  +++++++L+ L+L+++++
  MMETSP1325-20131115|2794_1  6 QVIDLS-GAKKVLGMvSMLQHFVNLTTLDLRYTSI 39
                788999.666777663579***********99986 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00062
   PF13855.1 23 glsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                ++ nL++L Ls+++++    + ++ +++Lr+L+++ +
  MMETSP1325-20131115|2794_1 49 HCINLEYLLLSKTRIHGPL-KKLALCTQLRHLDVREC 84
                6789*******99996554.45699999999998765 PP

  == domain 3    score: 5.4 bits;  conditional E-value: 0.0049
   PF13855.1 26 nLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                nL++L Ls+++++    + ++ +++Lr+L+++ +
  MMETSP1325-20131115|2794_1 52 NLEYLLLSKTRIHGPL-KKLALCTQLRHLDVREC 84
                6888888877775443.44577888888887654 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.0049
   PF13855.1  24 lsnLkvLdLs.gn 35 
                 ++nL+vLdL+ + 
  MMETSP1325-20131115|2794_1 145 CQNLRVLDLTrCR 157
                 6777777777333 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0      0.01        27       2      13 ..      28      39 ..      27      47 .. 0.83
   2 ?    1.1   0.1      0.26   7.1e+02       2      14 ..      52      64 ..      51      72 .. 0.84
   3 !    6.0   0.1    0.0064        17       1      14 [.      74      88 ..      74     103 .. 0.87
   4 !   10.3   0.0   0.00023      0.63       1      15 [.     146     161 ..     146     164 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.01
   PF13504.1  2 nLkeLdLsgnrL 13
                nL++LdL+++++
  MMETSP1325-20131115|2794_1 28 NLTTLDLRYTSI 39
                9******99876 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.26
   PF13504.1  2 nLkeLdLsgnrLt 14
                nL++L Ls +r++
  MMETSP1325-20131115|2794_1 52 NLEYLLLSKTRIH 64
                8999999999876 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.0064
   PF13504.1  1 pnLkeLdLsgnr.Lt 14
                ++L+ Ld++ +r L+
  MMETSP1325-20131115|2794_1 74 TQLRHLDVRECRrLK 88
                68*********8775 PP

  == domain 4    score: 10.3 bits;  conditional E-value: 0.00023
   PF13504.1   1 pnLkeLdLsgnr.Lts 15 
                 +nL++LdL ++r Lt+
  MMETSP1325-20131115|2794_1 146 QNLRVLDLTRCReLTD 161
                 59*********99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.42s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 925.65
//
Query:       MMETSP1325-20131115|2798_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.5   0.0       0.14   11.1   0.0    1.1  1  PF01830.13 Peptidase C7 family


Domain annotation for each model (and alignments):
>> PF01830.13  Peptidase C7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0     1e-05      0.14     143     184 ..      61     102 ..      51     109 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1e-05
  PF01830.13 143 vrrlassrdasladfGqGycylsalvdsarwrvarvlGwcvr 184
                 +++ + s+ +s+ df   yc l++l   a   va ++G  ++
  MMETSP1325-20131115|2798_1  61 IKGCSESQVTSVVDFSTNYCNLAMLYSGAEREVASATGVEMQ 102
                 677788999****************************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 750.16
//
Query:       MMETSP1325-20131115|2796_1  [L=309]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.33s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 1299.08
//
Query:       MMETSP1325-20131115|2800_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|2799_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.6  12.1      0.017   14.9   8.4    1.3  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
      0.011   14.4   8.6      0.014   14.0   6.0    1.1  1  PF12569.3  NMDA receptor-regulated protein 1
      0.032   13.8   2.7      0.045   13.3   1.8    1.1  1  PF05203.11 Hom_end-associated Hint
      0.052   13.9  15.4       0.11   12.8  10.7    1.5  1  PF04774.10 Hyaluronan / mRNA binding family
      0.094   12.4   2.4       0.13   12.0   1.7    1.2  1  PF11801.3  Tom37 C-terminal domain
       0.11   12.3   2.1       0.16   11.8   1.5    1.4  1  PF13311.1  Protein of unknown function (DUF4080)
       0.13   12.2   9.4       0.05   13.6   4.7    1.6  2  PF14058.1  PcfK-like protein
       0.14   10.9   0.2       0.13   11.1   0.2    1.1  1  PF02535.17 ZIP Zinc transporter
       0.16   11.3  12.7       0.24   10.8   8.8    1.2  1  PF03286.9  Pox virus Ag35 surface protein
       0.18   10.6   3.3       0.23   10.3   2.3    1.1  1  PF10846.3  Protein of unknown function (DUF2722)
       0.37    9.0  12.9       0.63    8.3   8.7    1.5  2  PF03344.10 Daxx Family
       0.39    9.2  12.8       0.54    8.7   8.9    1.1  1  PF10446.4  Protein of unknown function (DUF2457)
       0.48    9.0   2.1       0.65    8.5   1.4    1.2  1  PF06025.7  Domain of Unknown Function (DUF913)
        0.6   10.6  10.0        1.1    9.8   6.9    1.4  1  PF11748.3  Protein of unknown function (DUF3306)
       0.67    9.8  13.8        1.1    9.1   9.6    1.3  1  PF08432.5  Fungal protein of unknown function (DUF1742)
       0.71   10.1   5.7        1.2    9.4   3.9    1.3  1  PF13882.1  C-terminal domain of Fibronectin type III
       0.83    8.8  17.0        1.2    8.3  11.8    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
       0.95    8.0  10.3        1.3    7.5   7.2    1.1  1  PF03985.8  Paf1
       0.96    8.3  16.8        1.7    7.4  11.6    1.4  2  PF09073.5  BUD22
          1    8.5   5.1        1.4    8.1   3.5    1.2  1  PF03839.11 Translocation protein Sec62
        1.5    6.3   5.8          2    5.9   4.0    1.2  1  PF05758.7  Ycf1
        1.6    9.0  28.8         74    3.7  20.0    2.3  1  PF00428.14 60s Acidic ribosomal protein
        2.8    5.5  15.2        4.6    4.8  10.6    1.3  1  PF04147.7  Nop14-like family
          3    7.1   9.1        4.3    6.6   6.3    1.1  1  PF03064.11 HSV U79 / HCMV P34
        4.3    6.1   9.5        5.9    5.6   6.6    1.1  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit


Domain annotation for each model (and alignments):
>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   8.4   3.1e-05     0.017     154     198 ..     124     172 ..      97     175 .. 0.58

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.1e-05
   PF11705.3 154 aeedeeeklsalekkekeldaedeeeedkkee....eeeeeeeeedddf 198
                 a++++e+k++a+e+k+  ++++++e+e++ke+    eeeeeeee d+d+
  MMETSP1325-20131115|2799_1 124 AKAKAEAKAKAEEAKKAAAEEKEKENENEKEKkqdgEEEEEEEECDNDV 172
                 2345555666666555555555555555555533346666666666666 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   6.0   2.5e-05     0.014     409     463 ..     121     173 ..      86     191 .. 0.50

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.5e-05
   PF12569.3 409 saaerkklrkkakkaekkaekeeaekaekeeekkaaekkakkedeetkkkdpdpl 463
                 + + + k++ kak +e+k++++e++++e+e+e  +++k+  +e+ee+++ d+d +
  MMETSP1325-20131115|2799_1 121 DFEAKAKAEAKAKAEEAKKAAAEEKEKENENE--KEKKQDGEEEEEEEECDNDVE 173
                 44556677777777754444444443333333..222333333444444455544 PP

>> PF05203.11  Hom_end-associated Hint
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.8   8.1e-05     0.045      62     151 ..      90     183 ..      75     190 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8.1e-05
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05203.11  62 vvtanHiLvLrtpqnielterklkgke....nlakkkesdgraieivkevtksfekekegeeeakeiakefasvsaseeyieveieardfaals 151
                 vv+    LvL+ +++ +l  ++   k+    ++++k +++ +a++ + ++++++ekeke e+e++++++ ++++ ++e   +ve +  d+++++
  MMETSP1325-20131115|2799_1  90 VVSYYKALVLEPTTRAQLSVHCHCAKHriggDFEAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDVEATLIDLSEWK 183
                 6777888999999999999999888889999666666666666666666666666666555666666665555555666667777777766655 PP

>> PF04774.10  Hyaluronan / mRNA binding family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8  10.7    0.0002      0.11      34      91 ..     133     188 ..     120     196 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 0.0002
  PF04774.10  34 elaelkeeaaeeeekeeseEkqseeeeenkekeveeee.eveeedkemtLeeykalqek 91 
                 +++e k+ aaee+eke+++Ek++   ++++e+e+eeee +++ e+  ++L e+ka q+ 
  MMETSP1325-20131115|2799_1 133 KAEEAKKAAAEEKEKENENEKEK---KQDGEEEEEEEEcDNDVEATLIDLSEWKAWQNA 188
                 22223222222222222222222...223333444444345666889999*****9985 PP

>> PF11801.3  Tom37 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.7   0.00024      0.13      69     129 ..     121     181 ..      91     200 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00024
   PF11801.3  69 seedeedeeddeseeaaevaqsklherqltakskekeelkesknslecltlleelldekve 129
                 + e++ + e ++++e+a+ a ++++e+++++++++k++  e++ + ec +++e +l + +e
  MMETSP1325-20131115|2799_1 121 DFEAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDVEATLIDLSE 181
                 5677777788888888888888999999999999999***************999866654 PP

>> PF13311.1  Protein of unknown function (DUF4080)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.5   0.00029      0.16      53     168 ..      43     156 ..      35     192 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00029
   PF13311.1  53 lveef.espfdlyeelaeyyeekgyfkvshsrkalyeiLleFleeklkeelellkellkyDyllrekakkrPefleakeekeekeeikefllkeeeklekllpealetedrkqlrkk 168
                 l +++ e p +l +e+a+++ e  y ++++   ++ye L+e le  + ++   + ++l++    r + +   ++ +++   +++ + k+  ++++e+ +k  +e++e+e++++ +kk
  MMETSP1325-20131115|2799_1  43 LTTKYlEPPKRLSAEFAQWWGEIQYDDLQW---ERYEELAEVLEGVTLDDVVSYYKALVLEPTTRAQLSVHCHCAKHRIGGDFEAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKK 156
                 55666699999****************998...5799999999999999999****************9999999999999999999999999999999988888888766666655 PP

>> PF14058.1  PcfK-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       5.8   3.2e+03      10      26 ..      21      38 ..      15      52 .. 0.66
   2 ?   13.6   4.7   9.2e-05      0.05      66     130 ..      90     161 ..      73     179 .. 0.63

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 5.8
   PF14058.1 10 IkeYLeerak.eDeafaa 26
                 +++L+e++k +D  +++
  MMETSP1325-20131115|2799_1 21 LANFLDELCKmSDDDLQK 38
                568888888634554443 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 9.2e-05
   PF14058.1  66 aveYyd....eddikaekpieckvtvnkt...ielteeekkeakkeaekayqeeelakkkkkskkskkkaek 130
                 +v Yy+    e++  a+ +++c+ ++ ++    e   +  ++ak+e +k+++ ee++k+++++k++k+  e+
  MMETSP1325-20131115|2799_1  90 VVSYYKalvlEPTTRAQLSVHCHCAKHRIggdFEAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEE 161
                 789999999999999999******999888773333333333333333344444444444444444422222 PP

>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   0.00024      0.13     105     168 ..      97     171 ..      19     192 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00024
  PF02535.17 105 s............dahshgegrghdkehsettsdeaskskeskvenaeseeeeteeeesdhdheskeksesdkese 168
                              + h +++  g+d e +   + +a++++ + ++ ae++e+e e+e+++++  ++e++e++ ++ 
  MMETSP1325-20131115|2799_1  97 LvlepttraqlsvHCHCAKHRIGGDFEAKAKAEAKAKAEEAK-KAAAEEKEKENENEKEKKQDGEEEEEEEECDND 171
                 344444444443344444444455444444444444333332.222222222222222222222222222222222 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   8.8   0.00043      0.24      54     102 ..     125     173 ..     120     188 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00043
   PF03286.9  54 kkrkttkrkpvkkkkskkkekekeeeeekkeeededkdteenendddek 102
                 k+++ +k k+ + kk++ +ekeke+e+ek++++d ++++ee+e+d+d +
  MMETSP1325-20131115|2799_1 125 KAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDVE 173
                 55667788889999999999*****999999999999888888865544 PP

>> PF10846.3  Protein of unknown function (DUF2722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.3   0.00042      0.23     342     393 ..     122     173 ..     104     197 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00042
   PF10846.3 342 ikfensaiasqekeddddddddekerkkeeeedkekdsikddddkdlsedss 393
                 ++ + +a a+++ e+ +++ ++eke+++e+e++k++d +++++++++++d +
  MMETSP1325-20131115|2799_1 122 FEAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDVE 173
                 5566677888888888888888888888888888898899888888888755 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.5   8.1e+02     124     150 ..      15      43 ..       3      58 .. 0.74
   2 ?    8.3   8.7    0.0012      0.63     440     485 ..     132     175 ..     101     187 .. 0.51

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1.5
  PF03344.10 124 krakvfv..YinELCtvLkahsakkkqvv 150
                 +r+k+f   +++ELC +   + +k+k + 
  MMETSP1325-20131115|2799_1  15 ERSKIFLanFLDELCKMSDDDLQKHKASL 43 
                 68888865588999998888888887543 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0012
  PF03344.10 440 eeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeed 485
                  + e+a+k + ee +  +e+++++e++++ eeeeeeee dn++e  
  MMETSP1325-20131115|2799_1 132 AKAEEAKKAAAEEKE--KENENEKEKKQDGEEEEEEEECDNDVEAT 175
                 112222222222222..22223333444445555555666666654 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   8.9   0.00098      0.54      33      83 ..     125     174 ..     107     188 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00098
   PF10446.4  33 kkelairklgeeaeeealeeedededdeeddddeDeddddddddeDdedde 83 
                 k + + + ++eea++ a+ee+ e e+++e++ ++D+++++++++ D++ ++
  MMETSP1325-20131115|2799_1 125 KAKAEAKAKAEEAKKAAAEEK-EKENENEKEKKQDGEEEEEEEECDNDVEA 174
                 555666677777777777776.55555555555666666666666766665 PP

>> PF06025.7  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.4    0.0012      0.65     270     340 ..     108     179 ..      85     182 .. 0.60

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0012
   PF06025.7 270 kvedsqgkpvisgdssksetaepdeeae.aeataaesvelseatkeepdkveseeekedaeeltvtdyianv 340
                 +v+   +k  i gd +++++ae +++ae a+++aae+ e+++++++e++++  eee+e++  ++v + +  +
  MMETSP1325-20131115|2799_1 108 SVHCHCAKHRIGGDFEAKAKAEAKAKAEeAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDVEATLIDL 179
                 445555666677776555555555444404444555566666666666666777777777777776666655 PP

>> PF11748.3  Protein of unknown function (DUF3306)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   6.9    0.0019       1.1      11      82 ..     128     201 ..     123     203 .] 0.62

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0019
   PF11748.3  11 laa..kaaeepaeeaeeeeseeeaaeaeaaaeeeeeeaeledeelletlpdvealteesdvaaFlakgVdeevk 82 
                 ++a  ka+e+++++aee+e+e+e++++++++ eeeee+e+ d+++ +tl d+++ ++ ++  ++  +++d +v+
  MMETSP1325-20131115|2799_1 128 AEAkaKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDVEATLIDLSEWKAWQNAMPLYPSNIDISVR 201
                 44421223333333333333336677777777888888888888888999999998888877777777777766 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   9.6     0.002       1.1      75     122 ..     125     172 ..     110     188 .. 0.53

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.002
   PF08432.5  75 kkeyeekqkakkekkkkkkekdkekekkkdkkddksekekekeeeeka 122
                 k++ e+k ka + kk+  +ek+ke+e++k+kk+d +e+e+e+e +++ 
  MMETSP1325-20131115|2799_1 125 KAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDV 172
                 333344444333333333444444444444444444444444444433 PP

>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.9    0.0021       1.2      28      89 ..     114     171 ..     107     183 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0021
   PF13882.1  28 ikrsrggkysvkekedakldpeeqpkkdeefeeysreedekelkresqssedeekkkesseD 89 
                  k++ gg ++ k+k +ak++ ee   k+++ ee ++e++++++  ++q  e+ee+++e+++D
  MMETSP1325-20131115|2799_1 114 AKHRIGGDFEAKAKAEAKAKAEEA--KKAAAEEKEKENENEKE--KKQDGEEEEEEEECDND 171
                 345568999988888888888775..44344444443333322..34444455556666666 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  11.8    0.0022       1.2      71     132 ..     126     184 ..     112     186 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0022
   PF07423.6  71 eaakdedkeddsesekkdeeseeeeeeekekkeeeseedeketeekeesnvekeitn.peWkp 132
                     +++++ ++e++kk    ee+e+e++++ke++++ +e+e+ee+ +++ve + ++ +eWk+
  MMETSP1325-20131115|2799_1 126 A---KAEAKAKAEEAKKAA-AEEKEKENENEKEKKQDGEEEEEEEECDNDVEATLIDlSEWKA 184
                 2...222222223333333.3333344555566777777777788888888888776367775 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   7.2    0.0023       1.3     347     400 ..     116     169 ..     104     183 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0023
   PF03985.8 347 lRnpstkeekerdklrakfdpiefeevdedeeeeeeqrseeeeeeeeedeeeee 400
                 +R   + e+k++ +++ak +++++++ +e+e+e+e++++++++ eeee+eee +
  MMETSP1325-20131115|2799_1 116 HRIGGDFEAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECD 169
                 566666788888888888888888888888888877666555555555555433 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.6   2.5e+03      17      62 ..      40      94 ..      33      97 .. 0.61
   2 ?    7.4  11.6    0.0031       1.7     145     197 ..     123     175 ..     115     189 .. 0.64

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 4.6
   PF09073.5 17 kkferqklvrriknaekk.........skkdklarieeeiealksldleelakkl 62
                k++ + k     k + +           ++ + +r ee  e+l+ + l+++++++
  MMETSP1325-20131115|2799_1 40 KASLTTKYLEPPKRLSAEfaqwwgeiqYDDLQWERYEELAEVLEGVTLDDVVSYY 94
                4445555554455544445555555555666777888888888888888888776 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0031
   PF09073.5 145 kkaekekkkkkkkkkkkkkedesedkdeeessesedssddeeseeddsdsdee 197
                 + ++k ++k+k++++kk+ ++e+e+++e+e+++++d +++ee+ee d+d +++
  MMETSP1325-20131115|2799_1 123 EAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDNDVEAT 175
                 44555555666666666666666777777777777777777777777776654 PP

>> PF03839.11  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   3.5    0.0025       1.4      20      68 ..     125     169 ..     109     193 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0025
  PF03839.11  20 kykkekdkkkaeiaetkkskkeeskekkkekakeekkdteaeevdkelk 68 
                 k k+e ++k++e +        e+kek++e +ke+k+d e ee+++e +
  MMETSP1325-20131115|2799_1 125 KAKAEAKAKAEEAK----KAAAEEKEKENENEKEKKQDGEEEEEEEECD 169
                 22222222222222....2222345555555555555555555554433 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.0    0.0037         2     229     264 ..     131     169 ..      97     192 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0037
   PF05758.7 229 lseieer...seeekkkeieaesekkrakqeqeeeeeed 264
                 ++++ee      eek+ke e+e+ekk++ +e+eeeee d
  MMETSP1325-20131115|2799_1 131 KAKAEEAkkaAAEEKEKENENEKEKKQDGEEEEEEEECD 169
                 111111112222222222222222222222222222222 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7  20.0      0.14        74      21      81 ..      73     164 ..      67     176 .. 0.67

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.14
  PF00428.14  21 erlkllvkalegkdikeliangsakla..........................aaaaaaaaaaaaaaaaaaaeeekkeeeee.....Eeedd 81 
                 er++ l++ leg++++++++  +a +                           a a a a a++a++aaa+++e++ e e+e     Eee++
  MMETSP1325-20131115|2799_1  73 ERYEELAEVLEGVTLDDVVSYYKALVLepttraqlsvhchcakhriggdfeakAKAEAKAKAEEAKKAAAEEKEKENENEKEkkqdgEEEEE 164
                 6889999************988877669********************99754222333333333333333333333333336777733332 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  10.6    0.0085       4.6     260     309 ..     122     171 ..     120     188 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0085
   PF04147.7 260 ferRaqpadRtKTeeElakeeaerlkklEeeRlrRmrgeeeddeeeedse 309
                 fe++a++  ++K ee +++ ++e+ k+ E+e+ +  +geee++eee d++
  MMETSP1325-20131115|2799_1 122 FEAKAKAEAKAKAEEAKKAAAEEKEKENENEKEKKQDGEEEEEEEECDND 171
                 89999999999999999999999999999999999999999999988774 PP

>> PF03064.11  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.3    0.0078       4.3     136     192 ..     114     171 ..     103     184 .. 0.63

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0078
  PF03064.11 136 aeikdvgdvklaevaekvcralsrkks.dderkkksakqkekRrdedskkkkedrkkk 192
                 a+ + +gd  + ++ae+  +a + kk   +e++k+ +++kek++d + ++++e+++  
  MMETSP1325-20131115|2799_1 114 AKHRIGGDFEAKAKAEAKAKAEEAKKAaAEEKEKENENEKEKKQDGEEEEEEEECDND 171
                 4445456888888888888888887773444555555556666555555556655544 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   6.6     0.011       5.9      29      77 ..     125     173 ..     107     183 .. 0.56

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.011
  PF03896.11  29 aasaqdltedeeaeddvvdedeedeaeveedekteaeeeedeeea.gevk 77 
                 +a a+ ++++eea ++ ++e++e e e e ++k++ eeee+eee  ++v+
  MMETSP1325-20131115|2799_1 125 KAKAEAKAKAEEA-KKAAAEEKEKENENEKEKKQDGEEEEEEEECdNDVE 173
                 3334444555554.344445555555555555566666665554323443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2089  (0.152794); expected 273.4 (0.02)
Passed bias filter:                     1078  (0.0788473); expected 273.4 (0.02)
Passed Vit filter:                       273  (0.0199678); expected 13.7 (0.001)
Passed Fwd filter:                        37  (0.00270626); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.85u 0.37s 00:00:01.22 Elapsed: 00:00:00.56
# Mc/sec: 853.44
//
Query:       MMETSP1325-20131115|2802_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.1    8.6   7.8       0.03   13.7   1.0    1.6  2  PF00015.16 Methyl-accepting chemotaxis protein (MCP) signalling domain
        1.1    8.9   3.9        5.3    6.8   2.4    2.2  1  PF11360.3  Protein of unknown function (DUF3110)


Domain annotation for each model (and alignments):
>> PF00015.16  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.4      0.32   2.2e+03     183     208 ..      22      47 ..      10      53 .. 0.53
   2 ?   13.7   1.0   4.4e-06      0.03     125     200 ..      99     174 ..      76     175 .] 0.84

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.32
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00015.16 183 aalveeaaaaaetleeqaeeleelva 208
                  a+++ +a+++  l+++   le+++a
  MMETSP1325-20131115|2802_1  22 GAASSSSADSSDPLKSKERALEAALA 47 
                 34444445555555555555555554 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 4.4e-06
                 ---HHHHH---CCCCHHHHCCCHHHH---HHHHHHHHH--------HHHHHHHH.HHHHHHHHHHHHHHHHHHHHHH CS
  PF00015.16 125 egselveetgealkeIveavaeiadlvqeiaaaseeqsasieevnqaveeidev.tkenaalveeaaaaaetleeqa 200
                 eg++++ +t+++ k  v++v+ ++ +++ i +  +++++++++  +a +++++v +k+ +a+  +  +a + +++++
  MMETSP1325-20131115|2802_1  99 EGVDEI-DTKQVCKDCVKEVQTVTLTLDSITKRMQQMARTVSDAERAKKSLARVvSKDAFAAYPDKHDAKKLIRKMT 174
                 566666.589999*********************************9999998626778999999999988777765 PP

>> PF11360.3  Protein of unknown function (DUF3110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   2.4   0.00078       5.3      29      75 ..      65     121 ..      50     131 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00078
   PF11360.3  29 FeeedDaeRyall..........leaqdfptptveeideeeieefCeeagyeaelve 75 
                  e edD eRy             +++++++++ ve +de + +++C++   e+++v+
  MMETSP1325-20131115|2802_1  65 VEGEDDQERYVVTeeavesglapVDDEEDDEMAVEGVDEIDTKQVCKDCVKEVQTVT 121
                 477888888876522212221224467778889**************9999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1081  (0.0790667); expected 273.4 (0.02)
Passed bias filter:                      639  (0.0467379); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 735.72
//
Query:       MMETSP1325-20131115|2803_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.68
# Mc/sec: 341.83
//
Query:       MMETSP1325-20131115|2806_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.32s 00:00:00.64 Elapsed: 00:00:00.56
# Mc/sec: 286.71
//
Query:       MMETSP1325-20131115|2808_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|2809_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.59
# Mc/sec: 613.30
//
Query:       MMETSP1325-20131115|2804_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-28   97.9   0.0    6.3e-28   97.6   0.0    1.1  1  PF07059.7 Protein of unknown function (DUF1336)


Domain annotation for each model (and alignments):
>> PF07059.7  Protein of unknown function (DUF1336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.6   0.0   4.6e-32   6.3e-28     108     227 .]       2     122 ..       1     122 [. 0.95

  Alignments for each domain:
  == domain 1    score: 97.6 bits;  conditional E-value: 4.6e-32
   PF07059.7 108 afkellerflkgdevedaFrrerlKiiakivkgswivkklv...ynekpvlvgkrlqtkyvrgenylEidvdihsssvarkilelvl.gylkklvlDlalliegqteeELPErvLgavrlnkid 227
                 +f++l +rf  gd   d+Fr+er+K +++++ g+w++k++    ++ +pv++gk+l ++++ g ny+E+d+d++s  +a+ + ++v+ +   k+v+Dl  + e ++e ELPEr+Lg+ r +++d
  MMETSP1325-20131115|2804_1   2 QFDDLWRRFKTGD---DEFRNERFKFLPNVMDGPWALKAAFtrlGGMRPVILGKKLLINHFIGANYVELDIDVGSDRIASFLCNFVFpDATAKVVVDLSYTLECKDEAELPERLLGTFRNSYMD 122
                 7999*********...************************9999****************************************876478899**************************88886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1447.80
//
Query:       MMETSP1325-20131115|2811_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 673.69
//
Query:       MMETSP1325-20131115|2813_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 361.56
//
Query:       MMETSP1325-20131115|2812_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 968.53
//
Query:       MMETSP1325-20131115|2814_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0028   17.1   0.2     0.0054   16.2   0.1    1.4  1  PF05191.9 Adenylate kinase, active site lid


Domain annotation for each model (and alignments):
>> PF05191.9  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   3.9e-07    0.0054       1      25 [.      44      68 ..      44      71 .. 0.96

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 3.9e-07
                -EEES----EEBTTTB--S-----S CS
   PF05191.9  1 RrvCpdCGrvYhikfnpPkvdgvCD 25
                Rr++p++ + Yh+++n P  d vC 
  MMETSP1325-20131115|2814_1 44 RRTDPETDTAYHLDTNRPPYDVVCK 68
                9***********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 594.30
//
Query:       MMETSP1325-20131115|2815_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|2807_1  [L=521]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-10   39.5   0.0    9.8e-10   38.8   0.0    1.4  1  PF13419.1  Haloacid dehalogenase-like hydrolase
    0.00051   19.5   0.0     0.0013   18.2   0.0    1.6  1  PF13242.1  HAD-hyrolase-like
  ------ inclusion threshold ------
       0.01   16.2   0.0      0.032   14.6   0.0    1.9  1  PF00702.21 haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF13419.1  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   2.2e-13   9.8e-10       2     176 .]      81     278 ..      80     278 .. 0.77

  Alignments for each domain:
  == domain 1    score: 38.8 bits;  conditional E-value: 2.2e-13
   PF13419.1   2 vFDldgTLidfdfvikralrklvaerlgld..ltaaelrelggkpfeev.........ladllrelpkd.......aeeilealkea..nlesrlelfpdvvellrrlkakglklvilSngsaeavellleklgle.dlfdavftsddvgar..KPdpeayekvlerlgvkpeeilfidDsledveaAraaGirtvhv 176
                 vF l g+L+d+  ++ +a++ ++ae +g +   + + l  +  +p+  +         ++++l+ +++        ae ++e+++e   +l+ + ++  ++++l+++l +++++++++S+ +   + l     ++  + f+ ++++d+ g++   P+p++   + +  +v p +++ ++++  +  aAr+aG+r+v+v
  MMETSP1325-20131115|2807_1  81 VFALSGVLLDTTLDVGEAAKIVLAEMIGHEsvEQMDPLLFQTTEPETNHesgsawevlVRQVLAAAGIAedddgieAEMYRERVRERllALSRHTQPCKGARSLIAHLEHNRIPVAATSSSTTCEFALQRGGNEAMlNAFPYIICADSPGVAqqQPAPDMHLEASRLMEVSPADCIAFESTYTGALAARKAGMRVVLV 278
                 78889999999999888888777777777754333334444333333224556666675555555544445545556667777777788777999*************88***********9998887777777778**********9776444**********9999***************************987 PP

>> PF13242.1  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.9e-07    0.0013       4      50 ..     235     280 ..     233     300 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 2.9e-07
                 --STHHHHHHH----GGTTTEEEE---.HHHHHHHHH---EE----- CS
   PF13242.1   4 KPnpgmydkalevlgappsevvmiGDslatDieaAnaaGirsilVlt 50 
                  P+p m  +a + +++ p++++  + + +t  +aA++aG+r +lV  
  MMETSP1325-20131115|2807_1 235 QPAPDMHLEASRLMEVSPADCIAFEST-YTGALAARKAGMRVVLVGR 280
                 599************************.*****************75 PP

>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0     7e-06     0.032      82     204 .]     141     272 ..      77     272 .. 0.62

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7e-06
                 HHHHH..HHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHTGEBHHHHHHHHHHHHHTTC.EEEEESSCHHHHHHHHHHTTC.............SEEEEHHHTTSHHHHHHHHHHHTS-GGGEEEEESSCTTHHHHHHTS CS
                 xxxxx..xxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00702.21  82 lglrv..iapdlvaaegqskgrtvvvlaq...aralgviafadpvkpeaaeavasLkaagi.vvlltgdnpetaeaiakqagi.............dslvfaevkPepklfvaaieeLqidpgevamvGDgvnDapalaaAg 204
                 + l +  ia        ++ ++++++++    ++ l   + + ++ ++a+ ++a+L  + i v+  +   + t e + ++ g              ds  +a+  P+p++ + a + + ++p ++++++ + ++a a+++Ag
  MMETSP1325-20131115|2807_1 141 QVLAAagIA--------EDDDGIEAEMYRervRERLLALSRHTQPCKGARSLIAHLEHNRIpVAATS--SSTTCEFALQRGGNeamlnafpyiicaDSPGVAQQQPAPDMHLEASRLMEVSPADCIAFESTYTGALAARKAG 272
                 222211122........22222222222144477777778888******************666666..455555555555559999999655555444555559****99*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.33s 00:00:01.15 Elapsed: 00:00:00.50
# Mc/sec: 2497.00
//
Query:       MMETSP1325-20131115|2816_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.35s 00:00:00.63 Elapsed: 00:00:00.46
# Mc/sec: 302.15
//
Query:       MMETSP1325-20131115|2817_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|2810_1  [L=396]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-37  127.4   3.4    7.1e-17   61.1   0.1    3.2  3  PF00575.18 S1 RNA binding domain
  ------ inclusion threshold ------
      0.066   12.8   0.1       0.13   11.8   0.0    1.5  1  PF04390.7  Lipopolysaccharide-assembly


Domain annotation for each model (and alignments):
>> PF00575.18  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   3.2e-11   2.2e-07       3      74 .]      80     151 ..      78     151 .. 0.95
   2 !   35.4   0.1   1.1e-12   7.5e-09       4      73 ..     168     232 ..     165     233 .. 0.90
   3 !   61.1   0.1     1e-20   7.1e-17       4      74 .]     246     315 ..     243     315 .. 0.97

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 3.2e-11
                 STT-EEE--EEEEETTEEEEE--.--EEEEEGGGS-CCEEEECCCCEETT----EEEEE-EEETT.EEEESS CS
  PF00575.18   3 ekGevvkGtVtsvtkgGafVdlgngvegfipiseissdrvedpeevlkvgdevevkvlkvdkerkriiLsik 74 
                 + G+v++G+V++ + +Ga+Vd+g++  +f p+ e +   + d  + + ++++ +++++  ++e++++ +si+
  MMETSP1325-20131115|2810_1  80 ARGDVIQGKVVQYEYQGALVDIGAKSAAFMPLREAALIPDGDVATAVAIDETRDFQIISDEDENGQLLVSIR 151
                 569*******************************998888999************************99997 PP

  == domain 2    score: 35.4 bits;  conditional E-value: 1.1e-12
                 TT-EEE--EEEEETTEEEEE--.--EEEEEGGGS-CCEEEECCCCEETT----EEEEE-EEETT.EEEES CS
  PF00575.18   4 kGevvkGtVtsvtkgGafVdlgngvegfipiseissdrvedpeevlkvgdevevkvlkvdkerkriiLsi 73 
                 +++ ++G+V +v++gGa+V++  g ++f+p s+++         +  +g++ ++k+l+v+ e++++++s 
  MMETSP1325-20131115|2810_1 168 EDKAFDGEVIGVNRGGAIVNVH-GLRAFLPGSHLCG---A-VPSEDIIGQTFRLKFLEVNQETNKLVVSN 232
                 57789*****************.************5...4.5556679*******************996 PP

  == domain 3    score: 61.1 bits;  conditional E-value: 1e-20
                 TT-EEE--EEEEETTEEEEE--.--EEEEEGGGS-CCEEEECCCCEETT----EEEEE-EEETT.EEEESS CS
  PF00575.18   4 kGevvkGtVtsvtkgGafVdlgngvegfipiseissdrvedpeevlkvgdevevkvlkvdkerkriiLsik 74 
                  G+vv+G+V+++ ++GafV++  g++g+++is+is dr+ed + v+  +  ++ ++++ dk ++ri Ls+k
  MMETSP1325-20131115|2810_1 246 RGDVVQGVVKAIKPYGAFVEIA-GMSGLLHISQISYDRIEDLSSVVELNSLIKCMIIDHDKVNGRIALSTK 315
                 59********************.**********************************************97 PP

>> PF04390.7  Lipopolysaccharide-assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.9e-05      0.13     125     153 ..     336     364 ..     309     366 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.9e-05
                 S-HHHHTTHHHHHHHHHHHHHHHHHHHHH CS
   PF04390.7 125 gnelakdaeerdaieeaaedladqivrrl 153
                 + + ak  e+ +a+++a+e++a+ iv+ l
  MMETSP1325-20131115|2810_1 336 EETAAKYHERMEAERRAREEAAKDIVMGL 364
                 44679*********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       487  (0.0356202); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.39s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 1757.33
//
Query:       MMETSP1325-20131115|2819_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-06   27.7   0.0    1.9e-06   27.5   0.0    1.0  1  PF13410.1  Glutathione S-transferase, C-terminal domain
    6.4e-06   25.9   0.0    7.2e-06   25.7   0.0    1.1  1  PF00043.20 Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF13410.1  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   2.7e-10   1.9e-06      20      69 .]       2      56 ..       1      56 [. 0.88

  Alignments for each domain:
  == domain 1    score: 27.5 bits;  conditional E-value: 2.7e-10
                -----SS...-------HHHHHHHHHHHHH...HHHH------TT----HHHHHH CS
   PF13410.1 20 ahLadgp..fllGdrpslaDialapflvrl...daagpgldireayPnlrawler 69
                +hL+++p  f++G ++++aD ++ p+l  +   ++++++++ +e  P + +w+++
  MMETSP1325-20131115|2819_1  2 DHLEKSPgpFFCGKNITIADLTVLPQLKNFtkgHVDHVPTNVLEQSPAVTTWMAA 56
                699999999*********************6665556666999*********986 PP

>> PF00043.20  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   1.1e-09   7.2e-06      47      95 .]       9      61 .]       2      61 .] 0.84

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 1.1e-09
                SSSSSSSS-BHHHHHHHHHHH.....HHHHHTTTTTHTT-HHHHHHHHHHHHSH CS
  PF00043.20 47 kkylvGdkltlADialfpale.....wlqrldgnfleeefPklkawlkriaarp 95
                  +++G ++t+AD+ ++p l      +++ +  n+l e+ P+++ w+  ++a p
  MMETSP1325-20131115|2819_1  9 GPFFCGKNITIADLTVLPQLKnftkgHVDHVPTNVL-EQSPAVTTWMAAMLATP 61
                57*******************666666666666666.*************9977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 265.78
//
Query:       MMETSP1325-20131115|2821_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.76
# Mc/sec: 454.05
//
Query:       MMETSP1325-20131115|2822_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.63
# Mc/sec: 300.50
//
Query:       MMETSP1325-20131115|2823_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0097   15.5   1.5         24    4.7   0.0    3.3  3  PF08085.6 Entericidin EcnA/B family


Domain annotation for each model (and alignments):
>> PF08085.6  Entericidin EcnA/B family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   0.1    0.0027        37       2       7 ..      13      18 ..      12      19 .. 0.91
   2 !    4.7   0.0    0.0018        24       2       7 ..      24      29 ..      23      30 .. 0.88
   3 !    4.6   0.0    0.0019        26       2       7 ..      35      40 ..      34      41 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0027
   PF08085.6  2 TvrGaG 7 
                Tv+G+G
  MMETSP1325-20131115|2823_1 13 TVKGVG 18
                *****9 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0018
   PF08085.6  2 TvrGaG 7 
                Tv+G+G
  MMETSP1325-20131115|2823_1 24 TVKGVG 29
                *****9 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.0019
   PF08085.6  2 TvrGaG 7 
                Tv+G+G
  MMETSP1325-20131115|2823_1 35 TVKGVG 40
                *****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|2824_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-08   34.6   0.0    4.7e-05   23.8   0.0    2.3  2  PF12681.2  Glyoxalase-like domain
    1.1e-05   25.2   0.0    0.00011   22.1   0.0    2.5  2  PF00903.20 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
    0.00043   20.1   0.1      0.006   16.4   0.0    2.2  2  PF13669.1  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
  ------ inclusion threshold ------
      0.051   13.6   0.1       0.12   12.4   0.0    1.6  1  PF13380.1  CoA binding domain


Domain annotation for each model (and alignments):
>> PF12681.2  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0007       2.4      66     107 ..      20      58 ..       8      59 .. 0.84
   2 !   23.8   0.0   1.4e-08   4.7e-05       1     108 []      74     191 ..      74     191 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0007
   PF12681.2  66 dldalvarlkaaGakvlgepedepwggrefyvrDPdGnliel 107
                  +  + +r++a G++v++e   +++g+ + +v+ PdG+++ +
  MMETSP1325-20131115|2824_1  20 AVAGAEERAEAFGYTVVKE---YHQGQLSTFVLSPDGYRFKV 58 
                 57778899*******9997...55699************987 PP

  == domain 2    score: 23.8 bits;  conditional E-value: 1.4e-08
   PF12681.2   1 lpvsdleaaraFYeklLGfevae.....eegdfvtlslglalgsg.vrellgld.....epeapggggvhlafev....edldalvarlkaaGakvlgepedepwggrefyvrDPdGnlielv 108
                 l+v+dl  a+++Y+++LGf+v       e++d   +s g  ++++ +++l++       ++  ++g+++ ++ +v    e  +a+  ++ ++ +++   p+d      +  ++D dG+ i++v
  MMETSP1325-20131115|2824_1  74 LRVADLSSAVDYYTNVLGFKVLPtlpgtEHPDS-NVSVGW-AEDQvRIQLIQVSdgqavDHALSSGRHANVCKSVlpyyEGAKAAKDKIINKPLTL---PTDGKADVVVSILADRDGYEICFV 191
                 78*********************9999866643.344443.3444467777776333333444477888888777777777777777777765553...4443333357778*********96 PP

>> PF00903.20  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.26   8.8e+02      93     127 ..      27      57 ..      18      58 .. 0.61
   2 !   22.1   0.0   3.1e-08   0.00011       5     105 ..      72     164 ..      68     190 .. 0.57

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.26
                 HHHH-SGEEEEEECHHHHCEEEEEEEE-TT--EEE CS
  PF00903.20  93 rlkeagvkvvaepgrhyfgalysfyfrDpdGille 127
                 r+++ g+ vv+e   +  g+l +f +  pdG+++ 
  MMETSP1325-20131115|2824_1  27 RAEAFGYTVVKE---YHQGQLSTF-VLSPDGYRFK 57 
                 555555555555...334444444.8999999885 PP

  == domain 2    score: 22.1 bits;  conditional E-value: 3.1e-08
                 EEEEES-HHHHHHHHHHHH--EEEEEEEESCSCCEEEEEEEETSSCEEEEEEEECCTTSCTCHHHEECSEEEEEEEECEHHHHHHHHHHHHH-SGEEEEEE CS
  PF00903.20   5 valavgdleksldFYtkvLGfklvkktdnteeteglriaffhaggghielvlneapsgaakhvkkieetvhhvafialdvedvgkaldrlkeagvkvvaep 105
                 val+v+dl+ ++d+Yt+vLGfk++   + te  ++     +   ++++ + l ++ +g a+ +          + +a+    v  +++ +k+a+ k+  +p
  MMETSP1325-20131115|2824_1  72 VALRVADLSSAVDYYTNVLGFKVLPTLPGTEHPDSNV--SVGWAEDQVRIQLIQVSDGQAVDH------ALSSGRHANVCKSVLPYYEGAKAAKDKIINKP 164
                 789********************99998322223322..333344555555555555555554......23344445555555555555555555555555 PP

>> PF13669.1  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0       0.1   3.5e+02      70     102 ..      14      42 ..      10      49 .. 0.65
   2 !   16.4   0.0   1.8e-06     0.006       3      60 ..      72     128 ..      71     145 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.1
                 ---EEEEES-HHHHHHHHHT---EEEEEEE-GG CS
   PF13669.1  70 lhHlafevddldaavarleeqGfrvlqkgvrag 102
                 l+++a++v+      +r+e+ G++v+++ +++g
  MMETSP1325-20131115|2824_1  14 LQYIAMAVAGA---EERAEAFGYTVVKE-YHQG 42 
                 66777776655...56777788888875.3555 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 1.8e-06
                 E-EE-S-HHHHHHHHHH.---EESS--E.EET...TTTEEEEEEE---.-EEEEEEE---- CS
   PF13669.1   3 vgivVpDleaavaefskllGvgpweryrdepq...nvdlafarlgdgsavqielieplege 60 
                 v++ V Dl  av++++++lG+++  + + +++   nv + +a  +    v+i+li+ ++g+
  MMETSP1325-20131115|2824_1  72 VALRVADLSSAVDYYTNVLGFKVLPTLPGTEHpdsNVSVGWAEDQ----VRIQLIQVSDGQ 128
                 6889*****************977666654432227877777775....9******99987 PP

>> PF13380.1  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.4e-05      0.12       3      67 ..      19      79 ..      18     117 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.4e-05
   PF13380.1  3 iaVvGasdkpekysnkvlrylqe..........kgypvipVnpke...eeilgvkvyaslaedlpvdlvsvftpperv 67
                +aV+Ga ++ e +++ v++ +++           gy+  +V p +   e++l                  v+++ +++
  MMETSP1325-20131115|2824_1 19 MAVAGAEERAEAFGYTVVKEYHQgqlstfvlspDGYRFKVVAPIQgrgEQVLA-----------------VALRVADL 79
                69*********************555555555544443333333311133333.................33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.61
# Mc/sec: 1092.11
//
Query:       MMETSP1325-20131115|2825_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-06   27.6   0.0    2.4e-06   27.1   0.0    1.2  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   1.8e-10   2.4e-06       8      58 ..      10      55 ..       5      57 .] 0.92

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 1.8e-10
                -EEE-TT-B--EEEEEEE-EEEEEEE-----EEEEEEE-TTEECSGGGCCS CS
  PF00027.24  8 evifkeGdpadslyiilsGkvkvykndedgkesilaelgpGdffGelallt 58
                + i+  Gd+++ +yi++ G+++   ++   +     ++++Gd+fGe+ +++
  MMETSP1325-20131115|2825_1 10 DFIVCAGDESQDMYIMINGSAQELNKNRVLR-----VVHAGDSFGEMLCFG 55
                89*******************9999998887.....9***********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 248.35
//
Query:       MMETSP1325-20131115|2826_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-15   54.6   0.0    6.5e-15   54.5   0.0    1.0  1  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   4.7e-19   6.5e-15      16      94 ..       3      77 ..       1      79 [. 0.96

  Alignments for each domain:
  == domain 1    score: 54.5 bits;  conditional E-value: 4.7e-19
                HHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH-G CS
  PF00153.22 16 gaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkllsk 94
                g+++a+v +P+dvvK+rl      ++ +y ++++a+ +++++eG+ gly G+lp+ lr +  a+  ++ty+  k+ l++
  MMETSP1325-20131115|2826_1  3 GTLGAVVSNPVDVVKVRLL----ADQHRYPSTYSAYPTLWQSEGLAGLYAGVLPSTLRGAFIAVGELATYDISKQELKT 77
                8899***************....9999***********************************************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 345.24
//
Query:       MMETSP1325-20131115|2829_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0005   19.6   0.7      0.056   13.0   0.0    2.2  2  PF02183.13 Homeobox associated leucine zipper
    0.00056   18.8   0.1      0.015   14.1   0.0    2.0  1  PF04849.8  HAP1 N-terminal conserved region
     0.0059   16.7   0.0     0.0092   16.1   0.0    1.3  1  PF06005.7  Protein of unknown function (DUF904)
  ------ inclusion threshold ------
      0.021   14.4   0.0        3.7    7.2   0.0    2.2  2  PF05812.7  Herpesvirus BLRF2 protein
       0.12   12.2   2.4       0.69    9.8   0.3    2.1  2  PF00170.16 bZIP transcription factor


Domain annotation for each model (and alignments):
>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0     2e-05     0.056      16      32 ..      67      83 ..      65      86 .. 0.93
   2 !    4.7   0.2    0.0078        21      16      32 ..      93     109 ..      90     111 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2e-05
  PF02183.13 16 aLkaendsLqkEkekLr 32
                aL ++++sLq+E++kLr
  MMETSP1325-20131115|2829_1 67 ALLSKYHSLQMENSKLR 83
                799*************9 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0078
  PF02183.13  16 aLkaendsLqkEkekLr 32 
                 +L+++ + L++E+++Lr
  MMETSP1325-20131115|2829_1  93 SLQSRMKVLEEENDELR 109
                 68899999999999998 PP

>> PF04849.8  HAP1 N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   5.3e-06     0.015     154     185 ..      82     113 ..       4     123 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.3e-06
   PF04849.8 154 kseaskafqleaLqeklkdleeeNerLrseas 185
                       +  + +Lq ++k leeeN++Lr  a 
  MMETSP1325-20131115|2829_1  82 LRGDGSDLDVASLQSRMKVLEEENDELRRAAW 113
                 334455677889****************9885 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   3.4e-06    0.0092      13      53 ..      65     110 ..      62     132 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.4e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHHHH CS
   PF06005.7  13 iqqAvdtialLqmeieeLkeeneqlk.....eeneeLeeenkklke 53 
                 ++ ++ ++  Lqme+++L+ + ++l      +  + Leeen+ l++
  MMETSP1325-20131115|2829_1  65 VAALLSKYHSLQMENSKLRGDGSDLDvaslqSRMKVLEEENDELRR 110
                 6778889999**********999988999977888899****9994 PP

>> PF05812.7  Herpesvirus BLRF2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0051        14       4      23 ..      64      83 ..      60      85 .. 0.78
   2 ?    7.2   0.0    0.0014       3.7       2      31 ..      88     117 ..      87     154 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0051
                CHHHHHHHHHHHHHHHHHHH CS
   PF05812.7  4 tveeLaaelakLklENkaLk 23
                +v  L  + + L++EN++L+
  MMETSP1325-20131115|2829_1 64 EVAALLSKYHSLQMENSKLR 83
                45666777788********8 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0014
                 -CCHHHHHHHHHHHHHHHHHHHHCHHH--- CS
   PF05812.7   2 dltveeLaaelakLklENkaLkkklksstg 31 
                 dl+v  L+ +++ L+ EN +L++    s+ 
  MMETSP1325-20131115|2829_1  88 DLDVASLQSRMKVLEEENDELRRAAWTSDR 117
                 67999*****************98665554 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.057   1.5e+02      27      46 ..      64      83 ..      62      90 .. 0.69
   2 ?    9.8   0.3   0.00025      0.69      29      47 ..      92     110 ..      88     116 .. 0.88

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.057
                HHHHHHHHHHHHHHHH.... CS
  PF00170.16 27 eieeLeekvkeLeaeNkaLk 46
                e++ L  k  +L+ eN++L+
  MMETSP1325-20131115|2829_1 64 EVAALLSKYHSLQMENSKLR 83
                45566677777777777776 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00025
                 HHHHHHHHHHHHHH..... CS
  PF00170.16  29 eeLeekvkeLeaeNkaLkk 47 
                 + L+ ++k+Le+eN++L+ 
  MMETSP1325-20131115|2829_1  92 ASLQSRMKVLEEENDELRR 110
                 679**************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       464  (0.033938); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|2831_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 583.46
//
Query:       MMETSP1325-20131115|2835_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1187.98
//
Query:       MMETSP1325-20131115|2836_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 705.34
//
Query:       MMETSP1325-20131115|2837_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-10   39.7   0.0    3.1e-10   39.5   0.0    1.0  1  PF08123.8  Histone methylation protein DOT1
  ------ inclusion threshold ------
      0.019   14.3   0.0       0.02   14.2   0.0    1.2  1  PF01135.14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
       0.13   12.7   0.0        0.2   12.1   0.0    1.3  1  PF12847.2  Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF08123.8  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   6.9e-14   3.1e-10      11      95 ..      13      97 ..       4     102 .. 0.85

  Alignments for each domain:
  == domain 1    score: 39.5 bits;  conditional E-value: 6.9e-14
                GGGS--SSGGG----B-HHHHHHHHHHTT-----EEEEE------HHHHHHHH----EEE--B--HHHHHHHHHHHHHHHHHHHH CS
   PF08123.8 11 kLkkYkafsnevYGEllpeflsevldkvnlkkedvFvDLGSGvGnvvlqaalevgcklsvGvEimdnaselaekqkeelkkrlkl 95
                + k+     + +YGE+ ++  ++vl k+  ++   F+DLGSG G+ v+ a        +vG+Ei +     a +  e ++++ + 
  MMETSP1325-20131115|2837_1 13 EVKSMDEEKSLIYGEVEFHSFARVLRKIGPRPGTKFYDLGSGTGRAVFIARFLHDFDRCVGLEILEGLHGAAAQVLERYNQHYRQ 97
                56666667788******************************************************98887777777777766654 PP

>> PF01135.14  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.4e-06      0.02      60     124 ..      31      94 ..       6     103 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4.4e-06
                 HHHHHHHHHTT--TT-EEEEE------HHHHHHTTSSEEE...EE-SB---HHHHHHHHHHTT-- CS
  PF01135.14  60 hmvalalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle 124
                 h  a++l  +  ++g++  ++GsG+G +++ +ar++++  r v++e  + l  +a + l++ +++
  MMETSP1325-20131115|2837_1  31 HSFARVLRKIGPRPGTKFYDLGSGTG-RAVFIARFLHDFDRCVGLEILEGLHGAAAQVLERYNQH 94 
                 55667777777789************.6888999999999****************999987765 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.3e-05       0.2       2      45 ..      45      88 ..      44     103 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.3e-05
   PF12847.2  2 gkrilDlGcGtGslslelarlrpgak.vvgvDpseeslelarena 45
                g +  DlG+GtG+  + +ar  ++++  vg+++ e+  + a + +
  MMETSP1325-20131115|2837_1 45 GTKFYDLGSGTGRA-VFIARFLHDFDrCVGLEILEGLHGAAAQVL 88
                67899********9.777774455555*****9777777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 457.49
//
Query:       MMETSP1325-20131115|2838_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.004   17.2   0.0     0.0044   17.0   0.0    1.1  1  PF13472.1 GDSL-like Lipase/Acylhydrolase family


Domain annotation for each model (and alignments):
>> PF13472.1  GDSL-like Lipase/Acylhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   3.2e-07    0.0044       2      35 ..      21      59 ..      20      61 .] 0.68

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 3.2e-07
   PF13472.1  2 alGDSitaGygapsg.egyadrlaa...q.lgagvevvn 35
                +lGDS+ aG+g ++g   +++++a+   + l+a+v++  
  MMETSP1325-20131115|2838_1 21 FLGDSLIAGVGCETGeAHLPQLVARvlaEkLDADVSWKA 59
                9**********9977544444444433224999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 304.54
//
Query:       MMETSP1325-20131115|2833_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.098   12.5  10.7       0.84    9.5   1.0    2.9  3  PF06133.6  Protein of unknown function (DUF964)
       0.14   11.5   0.4       0.29   10.5   0.3    1.5  1  PF00325.15 Bacterial regulatory proteins, crp family
       0.19   11.4   2.7          3    7.5   0.3    2.4  2  PF04844.8  Transcriptional repressor, ovate
       0.24   11.3   1.4       0.78    9.6   0.1    2.3  3  PF00547.13 Urease, gamma subunit
       0.25   10.5   1.2        2.4    7.4   0.1    2.5  3  PF09850.4  Uncharacterized protein conserved in bacteria (DUF2077)
        2.1    7.6   6.4       0.67    9.3   1.6    2.0  2  PF12366.3  Cancer susceptibility candidate 1


Domain annotation for each model (and alignments):
>> PF06133.6  Protein of unknown function (DUF964)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.88     2e+03      83      97 ..       8      22 ..       6      32 .. 0.68
   2 ?    9.5   1.0   0.00037      0.84      37      81 ..      80     125 ..      75     147 .. 0.90
   3 ?    8.4   0.2   0.00081       1.8      61     103 ..     165     205 ..     154     207 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.88
                HHHHHHHHHHHHHHH CS
   PF06133.6 83 fkeaeqalqdllqev 97
                +++ +++++++l+ +
  MMETSP1325-20131115|2833_1  8 LMKRQKEVSRMLKRL 22
                667777777777655 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00037
                 HHHHHHHHHHHHHHHHHHTT-HHH.HHHHHHHHHHHHHHHTSHHHH CS
   PF06133.6  37 klieefkklqeeiqekqqqgkeea.keeeqklqelkreidknekva 81 
                 + i+++++ +  iq ++ qgk+ + + +++++++  ++i++++k a
  MMETSP1325-20131115|2833_1  80 QVIRQLNDARRLIQLYREQGKHDDaDRVQEEVDKSVKKIEEHKKQA 125
                 68999************************************99855 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.00081
                 HHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF06133.6  61 keeeqklqelkreidknekvaefkeaeqalqdllqevnkiiak 103
                 + e+qk+ +  +e d++ekv+++ +ae++  +++ ev+k +++
  MMETSP1325-20131115|2833_1 165 QNEQQKAGKPLSEADLDEKVEDYARAEEE--RMMGEVSKLVSE 205
                 789999999999***************96..899999998875 PP

>> PF00325.15  Bacterial regulatory proteins, crp family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   0.00013      0.29      19      30 ..      15      26 ..      15      26 .. 0.95

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00013
  PF00325.15 19 VsRlLgrLrekg 30
                VsR+L+rLr+++
  MMETSP1325-20131115|2833_1 15 VSRMLKRLRDEK 26
                9********997 PP

>> PF04844.8  Transcriptional repressor, ovate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.023        53       4      22 ..     130     148 ..     128     165 .. 0.81
   2 ?    7.5   0.3    0.0013         3       1      32 [.     204     236 ..     204     238 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.023
   PF04844.8   4 PyeDFreSMveMiaengir 22 
                 P+ DF++   eMi+  + r
  MMETSP1325-20131115|2833_1 130 PKMDFKNPTKEMIDDAKER 148
                 999**********988776 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0013
   PF04844.8   1 SedPyeDFreSMveM.iaengirdweeLeeLLa 32 
                 Se P +D  +S  +M ++  ++++++eLeeLL 
  MMETSP1325-20131115|2833_1 204 SEMPLRDVMSSLKDMgVDHSHLTTKQELEELLT 236
                 67799**********77788899*********7 PP

>> PF00547.13  Urease, gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.2   2.8e+03      43      80 ..      81     118 ..      77     121 .. 0.69
   2 ?    9.6   0.1   0.00034      0.78      21      79 ..     143     205 ..     138     215 .. 0.72
   3 ?   -1.6   0.0       1.1   2.5e+03      33      60 ..     229     256 ..     211     266 .. 0.74

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.2
                 HH--------HHHHHH----SS-GGGB----TTT-SEE CS
  PF00547.13  43 vlelardgktvaelmelgkklLtrddvlegvaelveev 80 
                 v+ +  d ++  +l ++  k   +d v+e+v + v+++
  MMETSP1325-20131115|2833_1  81 VIRQLNDARRLIQLYREQGKHDDADRVQEEVDKSVKKI 118
                 55555666666666666666667888999999888877 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00034
                 HHHHH----B-HHHHHHHHHHHHH-------..-HHHHHH----SS-..GGGB----TTT-SE CS
  PF00547.13  21 rrrkarglkLnhpEavaliaaevlelardgk..tvaelmelgkklLt..rddvlegvaelvee 79 
                    k+rg+ L  p +val+ +   e+ ++gk  + a+l e+ ++  +  ++ ++ +v +lv+e
  MMETSP1325-20131115|2833_1 143 DDAKERGIDLTDPKTVALLESMQNEQQKAGKplSEADLDEKVEDYARaeEERMMGEVSKLVSE 205
                 56799*********************9999844555666665555431144566666666665 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHH--------HHHHHH-- CS
  PF00547.13  33 pEavaliaaevlelardgktvaelmelg 60 
                  E   l++++++ ++r+g+   e  ++g
  MMETSP1325-20131115|2833_1 229 QELEELLTQTCIAKVRAGEPLPEPSSSG 256
                 4566788888888888888766655555 PP

>> PF09850.4  Uncharacterized protein conserved in bacteria (DUF2077)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.7   6.1e+03     145     156 ..      14      25 ..       6      36 .. 0.45
   2 ?    7.4   0.1     0.001       2.4       4      54 ..      82     132 ..      79     135 .. 0.88
   3 ?    1.4   0.0     0.068   1.6e+02      11     164 ..     216     247 ..     206     286 .. 0.50

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 2.7
   PF09850.4 145 lrsrlyellrkr 156
                  +sr+ ++lr+ 
  MMETSP1325-20131115|2833_1  14 EVSRMLKRLRDE 25 
                 333333333333 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.001
   PF09850.4   4 ldaarpllllvarlrssadpddieelrerlleelrqferrlreagyseedi 54 
                 ++ +++  +l+  +r++ ++dd ++++e++ + ++++e++ ++a++++ ++
  MMETSP1325-20131115|2833_1  82 IRQLNDARRLIQLYREQGKHDDADRVQEEVDKSVKKIEEHKKQAKLPPPKM 132
                 5567778889999999****************************9998776 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.068
   PF09850.4  11 lllvarlrs.sadpddieelrerlleelrqferrlreagyseedieaarYalCallDEavlntpwgerseWarksLqseffgetdgGekffellerllrepaenldllevyylcLsLGFeGryrvepegeeelealrsrlyellrkreeepaels 164
                   + ++ ++ + +++  e l +++++++r+                                                                                                                            +
  MMETSP1325-20131115|2833_1 216 KDMGVDHSHlTTKQELEELLTQTCIAKVRAG---------------------------------------------------------------------------------------------------------------------------E 247
                 5555555553333333344455555554443...........................................................................................................................3 PP

>> PF12366.3  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.6   0.00029      0.67      59     125 ..      79     145 ..      74     151 .. 0.85
   2 ?   -0.5   0.1      0.28   6.5e+02      83     129 ..     165     211 ..     150     217 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00029
   PF12366.3  59 neiiekleterveyeeais.kteeeakaargyktdikkeykskpkkkleikkppkepkelpegmfpdn 125
                 +++i +l+ +r+ ++ + +  +   a  ++++++++ k+ ++++ k+++++ p  ++k+ +++m++d+
  MMETSP1325-20131115|2833_1  79 AQVIRQLNDARRLIQLYREqGKHDDADRVQEEVDKSVKKIEEHK-KQAKLPPPKMDFKNPTKEMIDDA 145
                 48999999999999999998557889999999999888888777.77*****************9996 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.28
   PF12366.3  83 akaargyktdikkeykskpkkkleikkppkepkelpegmfpdnlniF 129
                 +++ ++  + +++++ +++++     + ++++ e+++ +++++l ++
  MMETSP1325-20131115|2833_1 165 QNEQQKAGKPLSEADLDEKVEDYARAEEERMMGEVSKLVSEMPLRDV 211
                 23333334455555555555555555557888888888777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1190  (0.0870392); expected 273.4 (0.02)
Passed bias filter:                      705  (0.0515652); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.78u 0.35s 00:00:01.12 Elapsed: 00:00:00.54
# Mc/sec: 1428.94
//
Query:       MMETSP1325-20131115|2839_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|2834_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1103.32
//
Query:       MMETSP1325-20131115|2841_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 225.26
//
Query:       MMETSP1325-20131115|2842_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|2846_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-09   35.8   6.0    4.7e-09   35.5   4.1    1.1  1  PF00569.12 Zinc finger, ZZ type
     0.0077   15.9   2.9      0.014   15.1   2.0    1.5  1  PF00643.19 B-box zinc finger
  ------ inclusion threshold ------
      0.041   13.8   7.2      0.058   13.4   5.0    1.2  1  PF03107.11 C1 domain
      0.062   13.0   2.5      0.064   13.0   1.7    1.2  1  PF01363.16 FYVE zinc finger
       0.18   11.5   2.1       0.18   11.5   1.4    1.1  1  PF10218.4  Uncharacterized conserved protein (DUF2054)
       0.26   10.3   0.2       0.26   10.3   0.1    2.6  3  PF00641.13 Zn-finger in Ran binding protein and others
        1.2    9.1   5.3        2.9    7.8   3.6    1.7  1  PF07649.7  C1-like domain


Domain annotation for each model (and alignments):
>> PF00569.12  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   4.1   2.4e-12   4.7e-09       7      37 ..       1      30 [.       1      39 [. 0.89

  Alignments for each domain:
  == domain 1    score: 35.5 bits;  conditional E-value: 2.4e-12
                -TTT-S..EESSEEEESSSSS-EE-HHHHHH CS
  PF00569.12  7 CniCkecpiigvRyhclkcsdYDLCqsCfst 37
                C +C++  ++g R+hc+ c ++D+C+ C  t
  MMETSP1325-20131115|2846_1  1 CSTCAA-RLVGLRWHCATCTNFDVCSDCALT 30
                99****.*********************987 PP

>> PF00643.19  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   2.0   7.1e-06     0.014       6      41 ..       1      43 [.       1      44 [. 0.85

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 7.1e-06
  PF00643.19  6 CpeHeeke..lqlfCedCqq.llCedCllee.....HkgHtvvp 41
                C+++      l+++C +C    +C dC+l+      H +H ++p
  MMETSP1325-20131115|2846_1  1 CSTCAARLvgLRWHCATCTNfDVCSDCALTPgnksvH-NHPLTP 43
                777876555699*******999********9999999.998876 PP

>> PF03107.11  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   5.0     3e-05     0.058       3      30 .]       1      28 [.       1      28 [. 0.95

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3e-05
  PF03107.11  3 CsvCerktdgfyfYtCkkcc.ftlHvrCa 30
                Cs C  +++g  + +C +c  f +++ Ca
  MMETSP1325-20131115|2846_1  1 CSTCAARLVGL-RWHCATCTnFDVCSDCA 28
                ***********.****99769*******8 PP

>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.7   3.3e-05     0.064      12      44 ..       1      32 [.       1      54 [. 0.77

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.3e-05
  PF01363.16 12 CeiCakkF.sltrrrhhCrlCGkv.vCskCsskrv 44
                C+ Ca++       r hC  C +  vCs+C  +  
  MMETSP1325-20131115|2846_1  1 CSTCAARLvG---LRWHCATCTNFdVCSDCALTPG 32
                9999999844...59*******977*****95443 PP

>> PF10218.4  Uncharacterized conserved protein (DUF2054)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.4   9.3e-05      0.18      51      86 ..      14      42 ..       1      54 [. 0.71

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 9.3e-05
   PF10218.4 51 sCetCdlsseCCevyeyCvsCClnPskrpllekvla 86
                +C         C+ ++ C  C l P ++++ ++ l+
  MMETSP1325-20131115|2846_1 14 HCA-------TCTNFDVCSDCALTPGNKSVHNHPLT 42
                333.......3799**************99988774 PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.3      0.16   3.2e+02       7      10 ..       1       4 [.       1       7 [. 0.79
   2 ?   10.3   0.1   0.00013      0.26       3      12 ..      10      20 ..       8      21 .. 0.83
   3 ?   -1.6   0.2       0.7   1.4e+03       7      10 ..      24      27 ..      23      29 .. 0.69

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.16
  PF00641.13  7 CskC 10
                Cs+C
  MMETSP1325-20131115|2846_1  1 CSTC 4 
                9999 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00013
  PF00641.13  3 g.dWdCskClv 12
                g +W+C +C++
  MMETSP1325-20131115|2846_1 10 GlRWHCATCTN 20
                558******97 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.7
  PF00641.13  7 CskC 10
                Cs C
  MMETSP1325-20131115|2846_1 24 CSDC 27
                7777 PP

>> PF07649.7  C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   3.6    0.0015       2.9       3      30 .]       1      28 [.       1      28 [. 0.91

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0015
   PF07649.7  3 CdaCglpidggpfYsCseC.dFvlHeeCa 30
                C++C   + g    +C +C +F+++ +Ca
  MMETSP1325-20131115|2846_1  1 CSTCAARLVG-LRWHCATCtNFDVCSDCA 28
                8888888888.889**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.29u 0.43s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|2845_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-09   35.0   0.1    2.4e-08   33.7   0.0    1.7  1  PF00408.15 Phosphoglucomutase/phosphomannomutase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00408.15  Phosphoglucomutase/phosphomannomutase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   1.8e-12   2.4e-08      13      67 ..      90     145 ..      39     152 .. 0.79

  Alignments for each domain:
  == domain 1    score: 33.7 bits;  conditional E-value: 1.8e-12
                 EEEEE------EE--EEEE-SSEEEE.EEE----SE...EEEEEEE-.--HHHHHHHHH CS
  PF00408.15  13 aeladilkvastneglkilledGrrvvvRpSGTePl...lRvyvEak.ddeelaelaee 67 
                 ++++d +   + ++gl+  +  G r+++R+SGT+++   +R+y+E++ d+  ++++ ++
  MMETSP1325-20131115|2845_1  90 DPVDDSI---TSKQGLVLSFVGGARAIFRLSGTGSEgatIRLYLESYeDEVDKQSQNPQ 145
                 3444443...479**********************************777666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.63
# Mc/sec: 783.57
//
Query:       MMETSP1325-20131115|2848_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 587.34
//
Query:       MMETSP1325-20131115|2849_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.24   11.4   3.4       0.66   10.0   0.6    2.4  2  PF12536.3 Patatin phospholipase


Domain annotation for each model (and alignments):
>> PF12536.3  Patatin phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.036     5e+02      14      56 ..      46      89 ..      40     102 .. 0.83
   2 ?   10.0   0.6   4.8e-05      0.66      11      65 ..     234     286 ..     231     293 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.036
   PF12536.3 14 lkqiqrlrralrelleklpeelrk.dpdvrelaelasgtavtiv 56
                 + +q++r++  +l ++  eel++ +++v +l+++  g++v+ +
  MMETSP1325-20131115|2849_1 46 DAASQQFRQTGLDLDRQKKEELEAfRSAVVKLRSYYAGESVKMI 89
                56789999999999999999999999999999999998888765 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 4.8e-05
   PF12536.3  11 tdrlkqiqrlrralrelleklpeelrkdpdvrelaelasgtavtivhLiyrskey 65 
                 + r+++ q+l+++lrel ++  e++r+++ + el++ + ++   +++Li+++ e 
  MMETSP1325-20131115|2849_1 234 VTRFAEMQHLNETLRELRDE--EHERNRSRIMELHDFKAKNLAALQELITKEVEL 286
                 678999***********996..6669999********************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1028  (0.0751902); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.51
# Mc/sec: 1423.72
//
Query:       MMETSP1325-20131115|2852_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 247.90
//
Query:       MMETSP1325-20131115|2850_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-15   57.6   0.0    3.5e-15   56.0   0.0    1.8  2  PF03950.13 tRNA synthetases class I (E and Q), anti-codon binding domain
  ------ inclusion threshold ------
        3.7    7.1  10.0        0.6    9.7   0.3    2.9  3  PF07926.7  TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> PF03950.13  tRNA synthetases class I (E and Q), anti-codon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   5.1e-19   3.5e-15      57     174 .]       3     126 ..       1     126 [. 0.84
   2 ?   -1.0   0.0      0.15   1.1e+03      51      75 ..     163     188 ..     142     234 .. 0.70

  Alignments for each domain:
  == domain 1    score: 56.0 bits;  conditional E-value: 5.1e-19
  PF03950.13  57 rlkpgeevrLkelynikveevekdesgevtelkleydgesleearkkkgiihWvsaeeaveaevrlYdrLfkeed.de...dfllnpdslkvleeglaepal.....anlkkgdivQfeRiGYfrvd 174
                  l+pg+ v L+++ ++k+eev+  +  e +e+ +++ +   ++ +++kg ++W + e+ v++e+rlYd+Lf +++ d+   ++ ln +s+ +++ ++++p++     +   +++ +QfeR G f+vd
  MMETSP1325-20131115|2850_1   3 GLAPGKWVGLRYGPCMKCEEVK-MNGSELVEIVATLADLPPDG-KRPKGNLQWAP-ENGVVFEARLYDHLFLVPQvDDkiwEEQLNYESEVICKGAMVDPSIlgpdgKLPPAQTHFQFERVGVFVVD 126
                 589******************6.44668888888888755544.699********.589*************888766555666******999*********6666555578899*********998 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.15
  PF03950.13  51 ereDakrlkpgeevrLke.lynikve 75 
                  +eDa++ ++++++ Lk+  +n+  +
  MMETSP1325-20131115|2850_1 163 AKEDARKAEQKRQMELKQsRGNLDPK 188
                 56677777777777776644555444 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.091   6.2e+02      42      54 ..      81      93 ..      75      98 .. 0.76
   2 ?    0.4   1.7     0.067   4.6e+02      80     108 ..     153     181 ..     137     195 .. 0.60
   3 ?    9.7   0.3   8.8e-05       0.6      23      46 ..     220     243 .]     216     243 .] 0.93

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.091
   PF07926.7 42 eaqdkYerelikh 54
                e q +Ye+e+i +
  MMETSP1325-20131115|2850_1 81 EEQLNYESEVICK 93
                5599*****9966 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.067
   PF07926.7  80 keadsakaelneleekweeeksmLevels 108
                 +  ++  ael ++ +   e+k+++e + s
  MMETSP1325-20131115|2850_1 153 EAPQKSAAELAKEDARKAEQKRQMELKQS 181
                 44455566666666666666666665544 PP

  == domain 3    score: 9.7 bits;  conditional E-value: 8.8e-05
   PF07926.7  23 eeqiqklkdDlenqaeiareaqdk 46 
                 +++i+klk+D+ +q +i+++aq+k
  MMETSP1325-20131115|2850_1 220 KNAIKKLKKDMAKQVKIYNNAQKK 243
                 679*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       836  (0.0611469); expected 273.4 (0.02)
Passed bias filter:                      455  (0.0332797); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1164.63
//
Query:       MMETSP1325-20131115|2853_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 474.28
//
Query:       MMETSP1325-20131115|2855_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 249.22
//
Query:       MMETSP1325-20131115|2854_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.57
# Mc/sec: 710.64
//
Query:       MMETSP1325-20131115|2847_1  [L=548]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-18   65.5   0.0    5.3e-18   64.9   0.0    1.2  1  PF00651.26 BTB/POZ domain
    5.3e-06   25.6   1.0    1.1e-05   24.7   0.7    1.5  1  PF02037.22 SAP domain


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9   0.0   7.8e-22   5.3e-18      20     110 ..     250     340 ..     224     341 .. 0.90

  Alignments for each domain:
  == domain 1    score: 64.9 bits;  conditional E-value: 7.8e-22
                 TEEEEE-HHHHHHH-HHHHHHTTTTTTTT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC..ECCHHHHHHHHHHHHT-HHHHCHHHHHHHH- CS
  PF00651.26  20 gkefkahkavLaarSpyFkalftggeieestvseieledvepevfealLefiYtgeleit.seenveelLaaadllqiprlkdaceeflkes 110
                 +++f ah++vL+arSpy++alf +  + e++++ ++  +v+p+vfe+lL +iYt++l+    e++  +lL aad++ ++ lk  ce  l++s
  MMETSP1325-20131115|2847_1 250 ARSFAAHRLVLSARSPYLNALFASP-MLEAQSRVVNETEVDPDVFEQLLIWIYTDTLDEGvVEAMGCHLLLAADKYGCEGLKLLCELELCSS 340
                 579**********************.78888889************************988789999*******************999987 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.7   1.5e-09   1.1e-05       3      34 ..     478     509 ..     476     510 .. 0.95

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 1.5e-09
                 T--HHHHHHHHHHTT------HHHHHHHHHHH CS
  PF02037.22   3 kltVaeLKaeLkkrGLptsGkKaeLieRLkeh 34 
                  ++Va+L+ eL krGL++ G++  L+eRL+++
  MMETSP1325-20131115|2847_1 478 RMRVAKLRRELVKRGLSSLGRRGRLVERLQQA 509
                 7*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.35s 00:00:01.20 Elapsed: 00:00:00.60
# Mc/sec: 2188.67
//
Query:       MMETSP1325-20131115|2858_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0057   16.1   1.1     0.0068   15.8   0.7    1.1  1  PF02507.10 Photosystem I reaction centre subunit III
  ------ inclusion threshold ------
      0.018   14.6   2.1      0.019   14.6   1.5    1.1  1  PF05302.6  Protein of unknown function (DUF720)
      0.089   12.5   0.5        0.1   12.3   0.4    1.2  1  PF09432.5  Tho complex subunit THP2
        1.4    8.6   7.0       0.17   11.5   1.7    1.8  2  PF00612.22 IQ calmodulin-binding motif
        2.7    7.8  12.9        7.4    6.4   8.9    1.7  1  PF13863.1  Domain of unknown function (DUF4200)


Domain annotation for each model (and alignments):
>> PF02507.10  Photosystem I reaction centre subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.7   2.5e-06    0.0068      32      77 ..      30      75 ..      22      81 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.5e-06
  PF02507.10 32 eskafekrekksvkklesrlkkyepdsapalalkkqiektkkrfek 77
                e++a ++re+++ ++l+++ ++y+++   a+ +++qi ++ +r+++
  MMETSP1325-20131115|2858_1 30 ETAAKARREQETAHRLQAQNQQYDAERCAAVQIQAQIRRALSRIDT 75
                5677899*********************************999986 PP

>> PF05302.6  Protein of unknown function (DUF720)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   1.5     7e-06     0.019      34      86 ..      17      69 ..       6      87 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7e-06
   PF05302.6 34 QqqknkelinlkllkvpdlqkkdensseiqavQssNQqisAnRql...iQqelsaa 86
                Q+++ +e  +++  +    +k   ++ +  ++Q++NQq+ A+R +   iQ ++  a
  MMETSP1325-20131115|2858_1 17 QERLERECRHVEAET---AAKARREQETAHRLQAQNQQYDAERCAavqIQAQIRRA 69
                444444444444333...344444567999*************7433377777655 PP

>> PF09432.5  Tho complex subunit THP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   3.8e-05       0.1      32      73 ..      37      78 ..      13      83 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.8e-05
   PF09432.5 32 dkeappeelqeilkkyeaeeeeieelraelkkYldeikaeRa 73
                 +++++++lq+  ++y+ae  ++ +++a++ + l  i  eR+
  MMETSP1325-20131115|2858_1 37 REQETAHRLQAQNQQYDAERCAAVQIQAQIRRALSRIDTERS 78
                45678899*****************************99995 PP

>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       2.6   7.2e+03      15      19 ..      34      38 ..      34      39 .. 0.76
   2 ?   11.5   1.7   6.1e-05      0.17       1      17 [.      56      72 ..      56      74 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.6
                HHHCH CS
  PF00612.22 15 laRkr 19
                +aR++
  MMETSP1325-20131115|2858_1 34 KARRE 38
                58996 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 6.1e-05
                HHHHHHHHHHHHHHHHH CS
  PF00612.22  1 rkaaikIQaawRgylaR 17
                r aa+ IQa++R+ l R
  MMETSP1325-20131115|2858_1 56 RCAAVQIQAQIRRALSR 72
                579**********9988 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   8.9    0.0027       7.4      14      84 ..      15      88 ..       7      89 .] 0.91

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0027
   PF13863.1 14 laldakreeierkeeelkereeelekkqeelqeslikfnk...flkdneakreraekkaeeekkekkekeeeik 84
                l++++ ++e ++ e+e +++ ++ ++   +lq ++++++       + +a+ +ra+ ++++e++++ ++e+ei+
  MMETSP1325-20131115|2858_1 15 LEQERLERECRHVEAETAAKARREQETAHRLQAQNQQYDAercAAVQIQAQIRRALSRIDTERSLRASREAEIN 88
                688899999999**************************98444678999***********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1307  (0.0955968); expected 273.4 (0.02)
Passed bias filter:                      657  (0.0480544); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.42s 00:00:00.87 Elapsed: 00:00:00.57
# Mc/sec: 367.72
//
Query:       MMETSP1325-20131115|2859_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|2860_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        78  (0.00570509); expected 273.4 (0.02)
Passed bias filter:                       77  (0.00563195); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.36s 00:00:00.63 Elapsed: 00:00:00.53
# Mc/sec: 180.86
//
Query:       MMETSP1325-20131115|2861_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.33s 00:00:00.63 Elapsed: 00:00:00.61
# Mc/sec: 204.28
//
Query:       MMETSP1325-20131115|2862_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-14   51.6   0.0    5.8e-14   51.5   0.0    1.0  1  PF02824.16 TGS domain


Domain annotation for each model (and alignments):
>> PF02824.16  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.0   4.2e-18   5.8e-14      16      60 .]       2      53 ..       1      53 [. 0.98

  Alignments for each domain:
  == domain 1    score: 51.5 bits;  conditional E-value: 4.2e-18
                TT-HHHHHHHH-S--GGG--EEEETS.......SEE-SSS---TTEEEEEES CS
  PF02824.16 16 gstveDfAykIhrslakkfiyAlVnG.......qrvglshvLedgDvVeIvt 60
                g tv  +A++I+++l   f  A+V+G       qrvgl+hvL+d+Dv+++vt
  MMETSP1325-20131115|2862_1  2 GVTVASAAQAISKELMAVFHFAYVWGsstkhspQRVGLTHVLQDEDVIQVVT 53
                889***********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|2864_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00031   20.2   0.6     0.0004   19.8   0.4    1.1  1  PF00736.14 EF-1 guanine nucleotide exchange domain


Domain annotation for each model (and alignments):
>> PF00736.14  EF-1 guanine nucleotide exchange domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.4   2.9e-08    0.0004      46      84 ..       1      40 [.       1      43 [. 0.89

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 2.9e-08
                ---EEEEEE---------HHHHHHHH...HHSTTEEEEEEE CS
  PF00736.14 46 FGlkkLqvsvvieDdevstdeleeki..lgleeeVqsveiv 84
                +G+kk+ +++vi+   vs+de++e+i    + eeVqs+e +
  MMETSP1325-20131115|2864_1  1 YGIKKICMTAVIPM-SVSMDEIIEEIieDIFPEEVQSMEMT 40
                9***********86.6******9999777889******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|2867_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-33  113.8   0.6    7.7e-33  113.6   0.4    1.0  1  PF04547.7 Calcium-activated chloride channel
  ------ inclusion threshold ------
       0.11   11.0   2.0       0.67    8.4   0.1    2.1  2  PF09852.4 Predicted membrane protein (DUF2079)


Domain annotation for each model (and alignments):
>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.6   0.4   1.1e-36   7.7e-33       1     151 [.      69     216 ..      69     219 .] 0.95

  Alignments for each domain:
  == domain 1    score: 113.6 bits;  conditional E-value: 1.1e-36
   PF04547.7   1 irdyFGekialYFawlgfytksllypavlGlilfllglsadqtfdniltvvfalfnvlwatlflelWkrreaelaykWgtldveeeqeeprpqFkgekkridpitgeeepyyppwkrllrrlvslpvvllcivlvfllmlgvfelrelvse 151
                 + +yFGe +alYFa l++y  +l++p++lGl +f l++     +d++++ ++ +f++ wa + l  W+rr +el+y+Wg+ld+e  +e+ rpqFkg  +  dp +ge +   ++w +++ +l+s++vv +++ +++ +m +++  r+++++
  MMETSP1325-20131115|2867_1  69 VASYFGETVALYFAGLECYALWLIPPSILGLGVFYLQVQ-AGRVDHPACCLYGIFISAWAPMLLVKWRRRASELSYRWGVLDYE-VEETVRPQFKG-SRTQDPFSGEWTAKKNKWLQFCTYLCSVVVVSAAVGVMLTVMGLMYRGRDYATS 216
                 679************************************.*******************************************9.99999******.666***************************************999888777765 PP

>> PF09852.4  Predicted membrane protein (DUF2079)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1    0.0084        57     208     252 ..      49      91 ..      35     106 .. 0.71
   2 ?    8.4   0.1   9.8e-05      0.67     128     161 ..     174     207 ..     169     214 .. 0.93

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.0084
   PF09852.4 208 hlgsslleilssllsrPglvlqelfspskllyllllllplgllpl 252
                  lg  l++++s ++++P +++ ++f  + +ly+  l  ++  l+l
  MMETSP1325-20131115|2867_1  49 TLGEMLTHMWSGMFEQPLDLVASYFGETVALYFAGL--ECYALWL 91 
                 4778999***********999888866655555444..3333333 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 9.8e-05
   PF09852.4 128 alkrkklglfillllllllvkedlalvvvalglw 161
                  +k++k+++f+  l+ +++v+++++++++++gl 
  MMETSP1325-20131115|2867_1 174 TAKKNKWLQFCTYLCSVVVVSAAVGVMLTVMGLM 207
                 689*****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.64
# Mc/sec: 820.00
//
Query:       MMETSP1325-20131115|2856_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00028   20.3   0.2        3.3    7.9   0.0    4.1  3  PF00560.28 Leucine Rich Repeat
     0.0077   16.0   1.2         49    4.3   0.0    4.2  5  PF13516.1  Leucine Rich repeat
     0.0093   15.8   1.5         21    5.7   0.0    4.2  5  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.013   14.9   1.7        3.3    7.3   0.3    3.8  2  PF12799.2  Leucine Rich repeats (2 copies)
      0.015   14.9   0.9       0.84    9.3   0.1    3.1  5  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       4.5   1.2e+04      11      18 ..      35      42 ..      35      47 .. 0.54
   2 !    7.9   0.0    0.0012       3.3       1      20 [.      90     110 ..      90     112 .. 0.85
   3 !    6.4   0.0    0.0038        10       1      20 [.     113     133 ..     113     186 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 4.5
                BCBCHHHH CS
  PF00560.28 11 nltslpps 18
                nl+sl ++
  MMETSP1325-20131115|2856_1 35 NLSSLDND 42
                45555555 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0012
                 TESEEEETSS.BCB.CHHHHHH CS
  PF00560.28   1 nLeeLdLsgN.nlt.slppsls 20 
                 +L+eL+L g+  ++ ++   ++
  MMETSP1325-20131115|2856_1  90 KLKELNLYGCsGMQgNIEV-FK 110
                 69********999988887.76 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.0038
                 TESEEEETSS.BCB.CHHHHHH CS
  PF00560.28   1 nLeeLdLsgN.nlt.slppsls 20 
                 n+++L+L g+  l  ++ + l+
  MMETSP1325-20131115|2856_1 113 NIKTLNLAGCeWLRgDIES-LK 133
                 7899******999888877.65 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.6   4.3e+03       3       8 ..      35      40 ..      33      48 .. 0.78
   2 ?    2.9   0.0     0.049   1.3e+02       3      12 ..      90      99 ..      89     105 .. 0.88
   3 ?    4.0   0.0     0.022        60       3      13 ..     113     123 ..     113     134 .. 0.82
   4 ?   -2.9   0.0       3.7     1e+04       4      10 ..     137     143 ..     135     153 .. 0.77
   5 ?    4.3   0.0     0.018        49       2      16 ..     161     175 ..     160     179 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.6
   PF13516.1  3 nLtsLd 8 
                nL+sLd
  MMETSP1325-20131115|2856_1 35 NLSSLD 40
                788887 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.049
   PF13516.1  3 nLtsLdLsnN 12
                +L++L+L ++
  MMETSP1325-20131115|2856_1 90 KLKELNLYGC 99
                69*****999 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.022
   PF13516.1   3 nLtsLdLsnNq 13 
                 n+++L+L ++ 
  MMETSP1325-20131115|2856_1 113 NIKTLNLAGCE 123
                 89******996 PP

  == domain 4    score: -2.9 bits;  conditional E-value: 3.7
   PF13516.1   4 LtsLdLs 10 
                 L++L L 
  MMETSP1325-20131115|2856_1 137 LQTLILA 143
                 8888875 PP

  == domain 5    score: 4.3 bits;  conditional E-value: 0.018
   PF13516.1   2 knLtsLdLsnNqigd 16 
                 +++t+LdL ++++ +
  MMETSP1325-20131115|2856_1 161 QSITDLDLRFTKLEG 175
                 689********9864 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0         5   1.4e+04       2       7 ..      35      40 ..      34      47 .. 0.65
   2 !    5.7   0.0    0.0077        21       2      12 ..      90     100 ..      89     106 .. 0.89
   3 ?    4.8   0.1     0.016        43       2      13 ..     113     125 ..     112     141 .. 0.79
   4 ?   -1.2   0.0       1.6   4.3e+03       3      10 ..     137     144 ..     135     160 .. 0.62
   5 ?    0.1   0.0      0.56   1.5e+03       3      14 ..     163     174 ..     161     175 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 5
   PF13504.1  2 nLkeLd 7 
                nL  Ld
  MMETSP1325-20131115|2856_1 35 NLSSLD 40
                555555 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0077
   PF13504.1   2 nLkeLdLsgnr 12 
                 +LkeL+L g++
  MMETSP1325-20131115|2856_1  90 KLKELNLYGCS 100
                 69********6 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.016
   PF13504.1   2 nLkeLdLsgnr.L 13 
                 n k+L+L+g++ L
  MMETSP1325-20131115|2856_1 113 NIKTLNLAGCEwL 125
                 6699***999754 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 1.6
   PF13504.1   3 LkeLdLsg 10 
                 L++L L+g
  MMETSP1325-20131115|2856_1 137 LQTLILAG 144
                 66777755 PP

  == domain 5    score: 0.1 bits;  conditional E-value: 0.56
   PF13504.1   3 LkeLdLsgnrLt 14 
                  ++LdL+ ++L+
  MMETSP1325-20131115|2856_1 163 ITDLDLRFTKLE 174
                 5899*9988875 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.83   2.3e+03      20      26 ..      33      39 ..      30      41 .. 0.52
   2 ?    7.3   0.3    0.0012       3.3       2      35 ..      90     123 ..      89     175 .. 0.66

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.83
   PF12799.2 20 lanLpnL 26
                lanL++L
  MMETSP1325-20131115|2856_1 33 LANLSSL 39
                4444444 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0012
   PF12799.2   2 nLevLdLsnNn.Ik.dlppelanLpnLktLnLsnNp 35 
                 +L++L+L +++  + +++  ++ + n ktLnL+++ 
  MMETSP1325-20131115|2856_1  90 KLKELNLYGCSgMQgNIEV-FKDM-NIKTLNLAGCE 123
                 6777777776433335555.5555.66666666553 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.96   2.6e+03      23      51 ..      35      39 ..      25      46 .. 0.57
   2 ?    9.1   0.0   0.00035      0.95      25      59 ..      89     122 ..      79     125 .. 0.88
   3 ?    9.3   0.1   0.00031      0.84       2      48 ..      90     135 ..      89     146 .. 0.50
   4 ?    6.8   0.2    0.0019       5.1       2      60 ..     113     172 ..     112     173 .. 0.67
   5 ?    0.6   0.0      0.15   4.2e+02       2      16 ..     162     176 ..     161     188 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.96
   PF13855.1 23 glsnLkvLdLsgnnlksispeafkgLpsL 51
                +ls+                        L
  MMETSP1325-20131115|2856_1 35 NLSS------------------------L 39
                2222........................2 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00035
   PF13855.1  25 snLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59 
                 ++Lk+L+L g++    + e+fk++ +++ LnL g+
  MMETSP1325-20131115|2856_1  89 EKLKELNLYGCSGMQGNIEVFKDM-NIKTLNLAGC 122
                 79***********999999*****.*******998 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.00031
   PF13855.1   2 nLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnnlksispeafkgL 48 
                 +LkeL+L ++  ++ +i+  +Fk++ n k+L+L g++  + + e++k++
  MMETSP1325-20131115|2856_1  90 KLKELNLYGCsGMQgNIE--VFKDM-NIKTLNLAGCEWLRGDIESLKDC 135
                 455555554423333333..55555.36666666555555555555555 PP

  == domain 4    score: 6.8 bits;  conditional E-value: 0.0019
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLs.gnnl.ksispeafkgLpsLreLnLsgNr 60 
                 n+k+L+L +++  + + +++k+++ L++L L  + +  + i  ++ +  +s++ L+L+ ++
  MMETSP1325-20131115|2856_1 113 NIKTLNLAGCEWLRGDIESLKDCP-LQTLILAgHPRFgSKITGNIKDLPQSITDLDLRFTK 172
                 789999999944444556999999.999999955555455555554444566666666665 PP

  == domain 5    score: 0.6 bits;  conditional E-value: 0.15
   PF13855.1   2 nLkeLdLsnNrlkvi 16 
                 ++++LdL++++l+  
  MMETSP1325-20131115|2856_1 162 SITDLDLRFTKLEGK 176
                 567888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.73
# Mc/sec: 623.71
//
Query:       MMETSP1325-20131115|2863_1  [L=494]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-11   43.0   0.0    4.2e-11   42.3   0.0    1.3  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   0.0     3e-15   4.2e-11     141     254 ..       2     125 ..       1     129 [. 0.75

  Alignments for each domain:
  == domain 1    score: 42.3 bits;  conditional E-value: 3e-15
                 -----EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC--.........-TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH................HHHHHHHHHHT-SSGGGS--HHHH CS
  PF00069.20 141 DFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgk.........lpfsgeseedqleliekilkkkleedepksssks................eelkdlikkllekdpakRltaeei 254
                 DFG a   +  ++ +t+ vg++ Y APE+ l    y+k+vD++++G++ly  + g          l             + + ++ +l+++e +s ++s                 +++ +++++l ++p++R+ta+ +
  MMETSP1325-20131115|2863_1   2 DFGGASLWQDGDKPMTSEVGSPFYSAPEIDL--HRYGKEVDIFAAGLTLYVAVAGFpteisqiwtL-------------LFEGRSHQLPYPEGQSLPSSpfpsadtspepalypsLMFRRFLSSCLVFKPSQRITAATA 125
                 ******9999*******************77..89*******************963333333333.............33333334444443333333444444445669999999******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.33s 00:00:01.14 Elapsed: 00:00:00.63
# Mc/sec: 1879.05
//
Query:       MMETSP1325-20131115|2869_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-19   68.4   0.9    9.2e-19   67.7   0.6    1.3  1  PF02782.11 FGGY family of carbohydrate kinases, C-terminal domain
  ------ inclusion threshold ------
       0.15   12.2   0.0        0.2   11.8   0.0    1.2  1  PF05768.9  Glutaredoxin-like domain (DUF836)


Domain annotation for each model (and alignments):
>> PF02782.11  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7   0.6   1.3e-22   9.2e-19     127     197 .]       3      73 ..       2      73 .. 0.98

  Alignments for each domain:
  == domain 1    score: 67.7 bits;  conditional E-value: 1.3e-22
  PF02782.11 127 legvalqlrailealekdsgaplsrlavdGGgsrndllmqllAdilgvpVerprtaeatalGaAllAaval 197
                 le+ a+q+++ +ea+e+dsg++ls++ vdGG++ n l+mq+ Ad+ +v + rp++ e+ta GaA+ A++a+
  MMETSP1325-20131115|2869_1   3 LEASAFQAQEMFEAMEADSGVKLSSINVDGGMTANALFMQFHADMAQVRINRPKYLETTAMGAAYCAGLAV 73 
                 8*******************************************************************985 PP

>> PF05768.9  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.9e-05       0.2      15      60 ..       9      57 ..       8      90 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.9e-05
                HHHHHCCC..CT--SEEEEEETT...TSCCHHHHSSSS-SEEEE--... CS
   PF05768.9 15 qakelLkelkleeglelevidId...edevlearYgveipvlalvgvtk 60
                qa+e+ +++++++g++l  i++d   + ++l+++++ +  ++ ++  ++
  MMETSP1325-20131115|2869_1  9 QAQEMFEAMEADSGVKLSSINVDggmTANALFMQFHADMAQVRINRPKY 57
                68999999***************6655555************9998654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.32s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 790.29
//
Query:       MMETSP1325-20131115|2871_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 429.35
//
Query:       MMETSP1325-20131115|2873_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.2e-12   45.9  15.5    6.4e-07   29.6   3.9    2.2  2  PF13865.1 C-terminal duplication domain of Friend of PRMT1


Domain annotation for each model (and alignments):
>> PF13865.1  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   3.9   4.7e-11   6.4e-07      15      55 ..       3      44 ..       1      53 [. 0.79
   2 !   22.5   1.5   7.5e-09    0.0001      27      55 ..      55      83 ..      44      94 .. 0.73

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 4.7e-11
   PF13865.1 15 rgrgarrgrsrgrggRkgrgkkkk.rkkvtredLDkeLDqYM 55
                ++ ++++ +++g+gg++g+g++ k +k++t+e+LD+++D++ 
  MMETSP1325-20131115|2873_1  3 GQAQGQGKGKGGKGGKGGKGEAPKeKKAMTAEELDAQMDDFL 44
                46677777777788888888877779*************986 PP

  == domain 2    score: 22.5 bits;  conditional E-value: 7.5e-09
   PF13865.1 27 rggRkgrgkkkkrkkvtredLDkeLDqYM 55
                 g ++++gkk+++++++++ LD+e+D+Y 
  MMETSP1325-20131115|2873_1 55 AGKKGKKGKKEEKEAKDSDALDAEMDSYF 83
                345556666666999*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       448  (0.0327677); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 508.03
//
Query:       MMETSP1325-20131115|2875_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.4   0.1       0.11   12.4   0.1    1.0  1  PF13801.1 Heavy-metal resistance


Domain annotation for each model (and alignments):
>> PF13801.1  Heavy-metal resistance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.8e-06      0.11       2      28 ..       2      28 ..       1      32 [] 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.8e-06
   PF13801.1  2 SLalNlflaGvvvgaalrgpgppgggp 28
                SL+l  +laG++ ++a++++g  gg +
  MMETSP1325-20131115|2875_1  2 SLLLLALLAGALPHGAQAHGGESGGEK 28
                9*******************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.25u 0.43s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 153.37
//
Query:       MMETSP1325-20131115|2876_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       496  (0.0362785); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 474.66
//
Query:       MMETSP1325-20131115|2877_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 618.26
//
Query:       MMETSP1325-20131115|2880_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.1   0.1         16    5.2   0.0    2.2  2  PF11061.3 Protein of unknown function (DUF2862)


Domain annotation for each model (and alignments):
>> PF11061.3  Protein of unknown function (DUF2862)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0011        16       7      26 ..      29      48 ..      24      60 .. 0.85
   2 ?    4.9   0.0    0.0014        19      18      41 ..      77     100 ..      70     102 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0011
   PF11061.3  7 vdlsrvkdrlpkelveklkk 26
                v++ r+++r+ +e+++ ++k
  MMETSP1325-20131115|2880_1 29 VEKGRLRNRIMRETASLIQK 48
                8899**************99 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0014
   PF11061.3  18 kelveklkkspigtikgyKmtDgk 41 
                 +++++k++ + i+t+ +y   Dg+
  MMETSP1325-20131115|2880_1  77 RDTLDKIRARGIATVDDYMSLDGR 100
                 57899*************999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 587.79
//
Query:       MMETSP1325-20131115|2881_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 405.20
//
Query:       MMETSP1325-20131115|2883_1  [L=339]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-46  157.4   0.0    4.1e-46  157.1   0.0    1.1  1  PF00069.20 Protein kinase domain
    1.5e-29  102.7   0.0    2.1e-29  102.2   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.056   13.0   0.8        7.5    6.0   0.0    2.2  2  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.1   0.0     9e-50   4.1e-46      56     259 ..      54     258 ..      37     259 .. 0.87

  Alignments for each domain:
  == domain 1    score: 157.1 bits;  conditional E-value: 9e-50
                 H-TTB--EEEEEEE..STEEEEEEE--SC-EHHHHHH.....HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGG CS
  PF00069.20  56 sHpnivkllevfee..kdelylvleyveggdlfdllk.....kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpw 259
                  +p++v+ l+++++  +  +++vley+++g+l+ l++         + e+ + +ia ++l+gle +H ++ iHrD+Kp+NiLld k+++ki+DFG+ak+  ++ + +++++gt +Ym+PE +  +++y+ ++DvWslG+ l++l+ g+lp++ +   + +  + +  + + + + p+  + se+l+++i  ++ kdp++R ta ++l+hp+
  MMETSP1325-20131115|2883_1  54 ACPYVVSSLDAYTDpeNAAICVVLEYMNAGSLQGLISmkqanPGWVIPETMLAMIADSVLCGLEAIHARKQIHRDIKPSNILLDCKSNVKISDFGIAKE-LNTASLANSFTGTLTYMSPERIA-GDDYSYTSDVWSLGLCLITLAIGQLPLPVA---KGYWGVVRAIQDEPSPSLPEG-QWSEQLRHFIACCMLKDPKERHTASQLLQHPL 258
                 4899*********9999999*****************66553333449**************************************************9.99999******************.****************************88...455545444444444444444.3359**************************97 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.2   0.0   4.7e-33   2.1e-29      59     257 ..      54     255 ..      37     256 .. 0.85

  Alignments for each domain:
  == domain 1    score: 102.2 bits;  conditional E-value: 4.7e-33
                 -BTTB--BEEEBE..SSSSEEEEEE---B--HHHHHHHT...GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTS.HHHHHHHHHHTT-BS---T.TSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12  59 khpnivkllgvct..keepllivteyvkgGdLlefLrkk...ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypgl.sneevlellkegkrlekpe.kcpeelyelmkqCweeepeeRptfkelve 257
                  +p +v+ l ++t  ++  +++v+ey++ G+L+ ++  k       +    l  +a  +  G+e ++++k +Hrd+   N+Ll+ ++ vkisDfG+a+++   ++ +  ++ +  + +m+pE +    ++ +sDvWs G +l  ++  g+ p p       v+++++++   + pe +++e+l +++  C+ ++p+eR t ++l +
  MMETSP1325-20131115|2883_1  54 ACPYVVSSLDAYTdpENAAICVVLEYMNAGSLQGLISMKqanPGWVIPETMLAMIADSVLCGLEAIHARKQIHRDIKPSNILLDCKSNVKISDFGIAKEL---NTASLANSFTGTLTYMSPERIAGDDYSYTSDVWSLGLCLITLAI-GQLPLPVAkGYWGVVRAIQDEPSPSLPEgQWSEQLRHFIACCMLKDPKERHTASQLLQ 255
                 678999*******655666****************9988332233456666777888999****************************************...4556667778899***************************9987.99****9944557999998888888777368899******************999976 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0016       7.5     169     184 ..     125     141 ..     112     151 .. 0.79
   2 ?    5.2   0.4     0.003        14      69     138 ..     256     326 ..     204     337 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0016
                 B-SS-SGGGEEEE.TTT CS
  PF01636.18 169 lHgDlhpgNllvd.pdd 184
                 +H+D++p N+l+d + +
  MMETSP1325-20131115|2883_1 125 IHRDIKPSNILLDcKSN 141
                 8***********95444 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.003
                 C.EEEEEE---HHBCCT.CSHHHHHHHHHHHHHHHHHHHHHS-.-TTSHGGHCTBCTHHHHHHHHHHHHHHHH CS
  PF01636.18  69 l.lfalleyvpgevler.klnarqlpallealaellaalhqad.paadpladflapyltllrllesataalva 138
                 + l +++  +p++++++ +++ + + ++++ la++ a+ h  + + +  + ++++++  + r+ e++  + + 
  MMETSP1325-20131115|2883_1 256 HpLLVAYRNQPAAPPLPpAMPTEAAVEMVRGLARTAADYHVDPdAKKVSPNSRRRRRGLPRRKGEEE--QERE 326
                 24778889999******999*******************9776555555555555555555555544..3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.53
# Mc/sec: 1532.76
//
Query:       MMETSP1325-20131115|2879_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-09   34.8   2.4    1.2e-08   34.5   1.6    1.1  1  PF00003.17 7 transmembrane sweet-taste receptor of 3 GCPR


Domain annotation for each model (and alignments):
>> PF00003.17  7 transmembrane sweet-taste receptor of 3 GCPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   1.6   8.5e-13   1.2e-08     137     238 .]      31     136 ..       2     136 .. 0.87

  Alignments for each domain:
  == domain 1    score: 34.5 bits;  conditional E-value: 8.5e-13
  PF00003.17 137 akiileCkegsdlalilvlgydilLllicfvlAfkarklpenFneakyitfsmlvfciiwlafiplylstrgk....iqvavlafallasssvlLlcifiPKvyii 238
                 +  +  C  g +++ +++ ++++ +++ +++l++ +r ++e+F e+ ++ +++++++++ ++   + +++++     +  +++a  ll+ ++++L+++fiPK++ i
  MMETSP1325-20131115|2879_1  31 QYSTPGCIAGTPWWEVTLEVFEAGIVIYGLILSYHTRAIHEAFAEGSWLSMAVYNMAVCATISNLVRFLFDRTenypVVLCIQATLLLVAATGVLFLLFIPKFCSI 136
                 55567788899999999999***************************************99999999999888889999999999*****************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.54
# Mc/sec: 1597.57
//
Query:       MMETSP1325-20131115|2885_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-47  159.5   0.0    9.2e-47  159.3   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.3   0.0   6.7e-51   9.2e-47     203     334 ..       3     131 .]       1     131 [] 0.97

  Alignments for each domain:
  == domain 1    score: 159.3 bits;  conditional E-value: 6.7e-51
  PF03028.10 203 adFRlfLtaepapklPiglLqnsikltnEpptGlkanllralss.fkqevlemckkeaefkrllflLcffHAvvqERrkfgplGWnksYeFnegDlrisldvldnyleanapekvpwealryllgeimYGGri 334
                 + FRlf+ta p+p++P+glLq+s k+tnEpp+Gl+a +lr+++  ++q+ le +  +  +++llf+Lcf+H++vqERrkfg lGW ++Ye+n+gD+++++ +l+++l +     + w++++y++++++YGG+i
  MMETSP1325-20131115|2885_1   3 PGFRLFITALPHPEFPLGLLQMSTKVTNEPPAGLQAGILRSYTVlVDQDRLERVDGP-MWRQLLFGLCFLHSIVQERRKFGSLGWCIPYEYNTGDITACILFLEKHLYNG---PISWQTFQYMVADVQYGGKI 131
                 67*****************************************9789******9998.9************************************************998...9******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 682.44
//
Query:       MMETSP1325-20131115|2886_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|2887_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|2888_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.052   13.1   0.6      0.052   13.1   0.4    1.9  2  PF05739.14 SNARE domain
       0.82    9.4   4.0       0.52   10.0   0.5    2.0  2  PF06103.6  Bacterial protein of unknown function (DUF948)
        2.5    8.4   6.3        3.2    8.0   0.3    2.3  2  PF04102.7  SlyX
        4.7    6.8  10.6         32    4.1   7.4    2.0  1  PF12325.3  TATA element modulatory factor 1 TATA binding


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       0.7   2.4e+03      14      16 ..      38      40 ..      23      49 .. 0.53
   2 ?   13.1   0.4   1.5e-05     0.052      15      47 ..      79     111 ..      71     115 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.7
                HHH CS
  PF05739.14 14 geL 16
                  +
  MMETSP1325-20131115|2888_1 38 EMV 40
                222 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14  15 eLkqlfldmgeeveeQgelldrIdnnvesassr 47 
                 +L+++ ++++e++ +Q+e+l  +  +ve  ++ 
  MMETSP1325-20131115|2888_1  79 DLAEQNKQLQEMLLKQNEQLTAMGGKVEALEDL 111
                 789999**********************98875 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.16   5.4e+02      37      64 ..      32      47 ..      10      58 .. 0.53
   2 ?   10.0   0.5   0.00015      0.52      36      74 ..      74     112 ..      56     115 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.16
   PF06103.6 37 kltkqvdgitketeellaktnelleDvn 64
                 l+  ++ +           +++ +D++
  MMETSP1325-20131115|2888_1 32 ALEMSLEMV-----------KDI-TDMQ 47
                333333322...........222.2333 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00015
   PF06103.6  36 kkltkqvdgitketeellaktnelleDvneKvetldpvf 74 
                 +++ +++ +  k+++e+l k+ne l+ + +Kve+l+ ++
  MMETSP1325-20131115|2888_1  74 TDVPTDLAEQNKQLQEMLLKQNEQLTAMGGKVEALEDLI 112
                 567788889999***********************9987 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.6     0.028        95      20      65 ..      15      59 ..       4      60 .. 0.55
   2 ?    8.0   0.3   0.00094       3.2      21      50 ..      85     114 ..      75     126 .] 0.76

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.028
   PF04102.7 20 ieeLNevvaeqqkeidrlqrqlrllaerlkeleessneaseaeeep 65
                  +LNe+ ++ + e+ +  +    +++ + +++e+s+   +aee  
  MMETSP1325-20131115|2888_1 15 KARLNEQHVNDDTELIKALEMSLEMVKDITDMQEKSKGLGAAEE-A 59
                56778765555555444444444566667777756554444444.3 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.00094
   PF04102.7  21 eeLNevvaeqqkeidrlqrqlrllaerlke 50 
                  +L e++ +q+++++++  ++++l++ ++ 
  MMETSP1325-20131115|2888_1  85 KQLQEMLLKQNEQLTAMGGKVEALEDLIRT 114
                 478888999999999999999888876665 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   7.4    0.0094        32       7     102 ..      11     111 ..       5     113 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0094
   PF12325.3   7 estssagpnvqlveklsstirrlEgElaslkeelarLekerde.areE....ivklteeneelkekkkeleelekeleeleqryettLellGEksEeveEL 102
                 e++++a  n q v+  ++ i+ lE  l  +k+  +  ek++   a+eE     + + + ++ +++  ++l+e +k+l+e+  ++++ L  +G k+E +e+L
  MMETSP1325-20131115|2888_1  11 ENQVKARLNEQHVNDDTELIKALEMSLEMVKDITDMQEKSKGLgAAEEapavASAQATPTDISTDVPTDLAEQNKQLQEMLLKQNEQLTAMGGKVEALEDL 111
                 5666777777777777888888888777777776666666653133332221345556677778889999*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1104  (0.080749); expected 273.4 (0.02)
Passed bias filter:                      696  (0.050907); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 616.21
//
Query:       MMETSP1325-20131115|2890_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-16   57.5   0.0    1.3e-15   56.9   0.0    1.3  1  PF03828.14 Cid1 family poly A polymerase


Domain annotation for each model (and alignments):
>> PF03828.14  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   9.7e-20   1.3e-15       2      58 ..      71     126 ..      70     127 .. 0.92

  Alignments for each domain:
  == domain 1    score: 56.9 bits;  conditional E-value: 9.7e-20
                 ---HHHHHHHH--------SEEB-------EEGGG-GGG-.S-.S-SSS--BB----T CS
  PF03828.14   2 lgeLLigFFeyYgseFdyenvvisirtggilskkekgwes.nkernrfllaIeDPfel 58 
                  g+LL+ FF+y+g eFdy n+++sir gg +sk  k +e+    +  ++l+IeDPfe+
  MMETSP1325-20131115|2890_1  71 TGQLLAAFFRYFGCEFDYVNDAVSIRAGGPVSKLVKAEEDcW--TAHSRLSIEDPFET 126
                 59***********************************99772..5679********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|2882_1  [L=669]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-76  257.7   0.0    1.8e-76  256.9   0.0    1.3  1  PF00225.18 Kinesin motor domain
    4.2e-08   32.8   0.0    1.2e-07   31.4   0.0    1.8  1  PF04564.10 U-box domain
     0.0083   15.8   0.3     0.0083   15.8   0.2    4.1  5  PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
  ------ inclusion threshold ------
      0.078   11.5   0.1       0.12   10.9   0.0    1.2  1  PF03209.10 PUCC protein
        8.5    5.3   7.6       0.72    8.8   0.3    2.6  3  PF13851.1  Growth-arrest specific micro-tubule binding


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.9   0.0   6.5e-80   1.8e-76      41     333 ..     312     598 ..     282     600 .. 0.92

  Alignments for each domain:
  == domain 1    score: 256.9 bits;  conditional E-value: 6.5e-80
                 EEEEESEEEETTS-HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-.........TTTTC---HHHHHHHHHHHHHCCTTTHT.....EEEEEEEEEEEEETTEEEETTSTTTTS-SS.BEEEECTTTCCEEECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT.TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHC CS
  PF00225.18  41 keftFdkvfdeeatqeevyeelakplvesvleGynvtifaYGqtgsGKTytmeGk........eeeeekGiipraleelFeeieeekeeke.....kefsvkvsylEiYnekiyDLLesekekkkkklkiredskkgkvyvkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaenkkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerak 333
                 + + F +vfd +++q++vy+ +a+p v s+l+G+n++++aYGqtgsGKT++  G           + + Gi++ral+e +e  +  +e+++      +++++ sy+EiYn++++DLL  +       +++r+        ++g  e +v+s++ +l+ll+ g+ ++++a+t++n++SSR+H++f ++++q++ ++         ++l+LvDLAGsEr++k++a e++r +Ea  INkSL++Lg+vI+aL e   ++hvpY + kLT+lL+ +Lgg s+t+ ++++  ++ +++etl++Lrf+er++
  MMETSP1325-20131115|2882_1 312 RPYPFSRVFDGQSEQDKVYDLCARPAVLSCLNGFNACVLAYGQTGSGKTHSCFGPqgtlegatGVSGQSGIVVRALSEALEAAQMLEESSRlsaapVTTKLSASYVEIYNDQVTDLLTGD------MCDVRRAG----GALSGAVECPVESLDGALRLLRAGQVRKRFAATAMNDRSSRAHTVFILQVRQTRGDS------LVNATLHLVDLAGSERLKKSKA-EGKRKTEAVGINKSLMVLGKVIAALVEG--KSHVPYLETKLTTLLKGALGGASRTTALICCRQDDAQADETLQALRFGERCS 598
                 6799*************************************************99999*9999557779************9999888763455558899******************65......36677643....479*************************************************98553......3468*****************5.6777************************..*************************************************986 PP

>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   4.3e-11   1.2e-07       1      71 [.      78     149 ..      78     151 .. 0.91

  Alignments for each domain:
  == domain 1    score: 31.4 bits;  conditional E-value: 4.3e-11
                 --GGGB-TTT-SB-SSEEE-TTT.-EEEHHHHHHHHTT.SSB-TTT-SB-.-GGGSEE-HHHHHHHHHHHHHC CS
  PF04564.10   1 vPdefldpitlelmkdPvilPsg.itvDrstiekhllsrdktdPftrepl.teeelipnlelKekIdkfleek 71 
                 vP+ +ldp    +m+dPv lPs+ ++vDr+   +++ +    d +  +pl + + l p   l+++I+++ e++
  MMETSP1325-20131115|2882_1  78 VPPKYLDPCLGHVMRDPVRLPSSgTVVDRKVAVAYMSK-FGKDLMDGTPLaDPSRLEPMDDLRNEINEWREAR 149
                 8*********************99**************.8889999777625799**************9876 PP

>> PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.14   3.9e+02      17      32 ..     104     119 ..     101     121 .. 0.91
   2 ?    0.6   0.0      0.15   4.1e+02      84     114 ..     128     161 ..     125     180 .. 0.71
   3 ?   -3.8   0.0       3.3   9.1e+03      88     110 ..     245     267 ..     242     288 .. 0.62
   4 ?   -1.0   0.1      0.46   1.3e+03      17      45 ..     465     494 ..     459     502 .. 0.82
   5 !   15.8   0.2     3e-06    0.0083      55     103 ..     608     656 ..     588     667 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.14
   PF05852.6  17 vnkrvaVSlfDRFGks 32 
                 v+++vaV  + +FGk+
  MMETSP1325-20131115|2882_1 104 VDRKVAVAYMSKFGKD 119
                 89************97 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.15
   PF05852.6  84 drkklerleaLtdrvee...lkeelefelerlea 114
                 d+ +le +++L+++++e   +++e + +++++++
  MMETSP1325-20131115|2882_1 128 DPSRLEPMDDLRNEINEwreARDETQSNIDKVNR 161
                 6778888999988876511166777777777765 PP

  == domain 3    score: -3.8 bits;  conditional E-value: 3.3
   PF05852.6  88 lerleaLtdrveelkeelefele 110
                 ++ +e+Lt  +e ++ee+ ++ +
  MMETSP1325-20131115|2882_1 245 VATAEQLTKGLEGAEEEVGAAEQ 267
                 77788888888888888765543 PP

  == domain 4    score: -1.0 bits;  conditional E-value: 0.46
   PF05852.6  17 vnkr.vaVSlfDRFGkssalfkkQfektkk 45 
                 v kr +a  + DR  + + +f  Q  +t+ 
  MMETSP1325-20131115|2882_1 465 VRKRfAATAMNDRSSRAHTVFILQVRQTRG 494
                 77773456788*************999985 PP

  == domain 5    score: 15.8 bits;  conditional E-value: 3e-06
   PF05852.6  55 kekelkekvssleteieekkkelelLkkfdrkklerleaLtdrveelke 103
                   ++ +e +++++++++++++++e+L++  + +l+++ +L+drve+l++
  MMETSP1325-20131115|2882_1 608 AASSASEALAAIDSTLKSCQSQMESLRNRGKSHLSAFKQLQDRVEQLTQ 656
                 4566778999************************************986 PP

>> PF03209.10  PUCC protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.3e-05      0.12     113     184 ..     513     584 ..     483     622 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4.3e-05
  PF03209.10 113 LaadlaeeeerpkvvgllyvmllvGiivsaivvgalledfsearLirviqgvavitlvlnvialWkiearsk 184
                 L  + ae +++ ++vg+  +++++G +++a+v g    ++ e++L  +++g+  ++   + + + +++  + 
  MMETSP1325-20131115|2882_1 513 LKKSKAEGKRKTEAVGINKSLMVLGKVIAALVEGKSHVPYLETKLTTLLKGALGGASRTTALICCRQDDAQA 584
                 6667889999*************************************9999877666666666666655555 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3      0.65   1.8e+03      86     117 ..      45      76 ..      36      79 .. 0.56
   2 ?   -0.7   0.0      0.22   6.1e+02      26      56 ..     132     162 ..     130     179 .. 0.76
   3 ?    8.8   0.3   0.00026      0.72      82     138 ..     610     665 ..     603     669 .] 0.84

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.65
   PF13851.1  86 qsLknlkaklkelekelknlkwesevleqrfe 117
                 ++Lk+ +ak+ ++e  +k+ + e+ + ++ fe
  MMETSP1325-20131115|2882_1  45 VKLKRQEAKRAKMEAAKKRERGEDAQIDDIFE 76 
                 45555555555555555555555555555444 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.22
   PF13851.1  26 LelIkslkeeiaelkkkeekneklmaeikke 56 
                 Le  ++l++ei+e ++  ++++++++++++ 
  MMETSP1325-20131115|2882_1 132 LEPMDDLRNEINEWREARDETQSNIDKVNRS 162
                 5566788999999999999999888888754 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.00026
   PF13851.1  82 ekdkqsLknlkaklkelekelknlkwesevleqrfekverErdelykkfeaaiqdvq 138
                 ++ +++L+ + + lk+++ ++++l+ + ++    f+++++  ++l+++ ++ai dv 
  MMETSP1325-20131115|2882_1 610 SSASEALAAIDSTLKSCQSQMESLRNRGKSHLSAFKQLQDRVEQLTQR-RRAIADVA 665
                 6678899*********************************99999955.55566654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (669 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       980  (0.0716793); expected 273.4 (0.02)
Passed bias filter:                      501  (0.0366442); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.15u 0.40s 00:00:01.54 Elapsed: 00:00:00.68
# Mc/sec: 2357.59
//
Query:       MMETSP1325-20131115|2889_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-18   66.3   0.0    3.9e-18   66.2   0.0    1.1  1  PF13419.1  Haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.032   14.1   0.2        0.1   12.5   0.2    1.8  1  PF07661.8  MORN repeat variant
      0.093   12.6   0.1        0.8    9.6   0.0    2.3  2  PF01471.13 Putative peptidoglycan binding domain


Domain annotation for each model (and alignments):
>> PF13419.1  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.0   8.5e-22   3.9e-18      59     176 .]      71     193 ..       4     193 .. 0.88

  Alignments for each domain:
  == domain 1    score: 66.2 bits;  conditional E-value: 8.5e-22
   PF13419.1  59 d....aeeilealkeanlesrlelfpdvvellrrlkakglklvilSngsaeavellleklgledlfdavftsddvga.rKPdpeayekvlerlgvkp.eeilfidDsledveaAraaGirtvhv 176
                      ++++++ + e  ++ + e+++dv+++l+r+++ g +++i+S+gs++a++l++ +++ +dl + + +++d+++ +K +  +ye+++e++g++  + +lf+ D +++  a ++aG +tv++
  MMETSP1325-20131115|2889_1  71 PlkqlQGHLWKFYYES-GDIKGEMYDDVLPALKRWQKDGTPVYIYSSGSRAAQRLIFGYSDKGDLRPFLSGYFDTKVgAKIEAGSYENIAETIGIEDtSKLLFCTDMMNEATASTEAGVNTVLF 193
                 0444588999999997.78899*************88****************************************99****************66599*********************986 PP

>> PF07661.8  MORN repeat variant
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   2.3e-05       0.1       5      18 ..      80      93 ..      77      95 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
   PF07661.8  5 ekeYyenGklksei 18
                +k+Yye+G +k+e+
  MMETSP1325-20131115|2889_1 80 WKFYYESGDIKGEM 93
                9**********997 PP

>> PF01471.13  Putative peptidoglycan binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00018       0.8       5      39 ..      72     106 ..      69     108 .. 0.91
   2 ?   -0.2   0.0      0.19   8.7e+02      15      35 ..     126     151 ..     117     152 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00018
                 HHHHHHHT..--------------HHHHHHHHHHH CS
  PF01471.13   5 veelqryLsrlGylsgtadgtfgpateeAvkefQr 39 
                  ++lq  L +++y sg++ g    ++  A+k++Q+
  MMETSP1325-20131115|2889_1  72 LKQLQGHLWKFYYESGDIKGEMYDDVLPALKRWQK 106
                 689********999***999999999999999998 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.19
                 ---------......-----HHHHHHH CS
  PF01471.13  15 lGylsgtad......gtfgpateeAvk 35 
                 +Gy+ ++ d      g+f++++ +++ 
  MMETSP1325-20131115|2889_1 126 FGYS-DKGDlrpflsGYFDTKVGAKIE 151
                 7887.3333334445999998887775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.60
# Mc/sec: 870.68
//
Query:       MMETSP1325-20131115|2892_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.017   14.3   0.0      0.036   13.2   0.0    1.6  1  PF13202.1 EF hand
       0.11   11.1   0.0       0.14   10.8   0.0    1.1  1  PF11940.3 Domain of unknown function (DUF3458)


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   5.3e-06     0.036       7      24 ..       7      24 ..       6      25 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.3e-06
                HH--S----B-HHHHHHH CS
   PF13202.1  7 afDlNgDGkIsreELkrl 24
                ++D N D  +sr E+++l
  MMETSP1325-20131115|2892_1  7 CIDRNHDNDVSRAEWYKL 24
                69**************98 PP

>> PF11940.3  Domain of unknown function (DUF3458)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   2.1e-05      0.14     269     302 ..      18      51 ..       4      58 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.1e-05
                 HHHHHHHHHHHTTSHHHHHHHHHHHHT---TTHH CS
   PF11940.3 269 eealadfyerwkddalvlDkWfalqasspredal 302
                 ++   + y++wk++ lv+D ++   a+ + ++  
  MMETSP1325-20131115|2892_1  18 RAEWYKLYNKWKNSGLVMDAFLEKIAMDAPKEQK 51 
                 4556689***************999998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 577.94
//
Query:       MMETSP1325-20131115|2895_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 784.69
//
Query:       MMETSP1325-20131115|2894_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 806.94
//
Query:       MMETSP1325-20131115|2898_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       555  (0.0405939); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.47s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 354.46
//
Query:       MMETSP1325-20131115|2897_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-22   78.6   0.0    3.6e-22   78.2   0.0    1.2  1  PF00578.16 AhpC/TSA family
    5.9e-05   22.5   0.0    8.1e-05   22.0   0.0    1.2  1  PF08534.5  Redoxin
    0.00032   20.1   0.1     0.0008   18.8   0.0    1.7  1  PF10417.4  C-terminal domain of 1-Cys peroxiredoxin
  ------ inclusion threshold ------
      0.023   14.4   0.0      0.027   14.2   0.0    1.2  1  PF13911.1  AhpC/TSA antioxidant enzyme


Domain annotation for each model (and alignments):
>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.2   0.0     1e-25   3.6e-22       2     123 ..       6     141 ..       5     142 .. 0.93

  Alignments for each domain:
  == domain 1    score: 78.2 bits;  conditional E-value: 1e-25
  PF00578.16   2 gdkapdfelkdtdgkkvslsdl.kgkpvvLffypkdfcpvCttelpalaelyeefkkkgvevigvsvdspeshkkfaekne......lnfpllsDeegevakaygvlnee........kglalratfvidkegkiry 123
                 g+k+ d   ++t+ +   l+d+  +++  Lf++p+d +pv ttel ++a+l+++f++++++vi++s+d   +h+ ++++ +      +nfp+++D+ +++a ++++++ e           ++ra+ +i +++k+++
  MMETSP1325-20131115|2897_1   6 GEKVEDVMCNTTK-GVTGLYDYiGNNWCCLFSHPGDYTPVGTTELGEMARLAPQFDSRDAKVIALSCDHLANHQGWIQDVKaatgfdVNFPIIADPGRDTAAQLKMIKMEhrgadtrgLPRTVRAVLIIGPDKKVKA 141
                 6677777776665.78889***7669*********************************************************************************999******998999*************86 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   2.4e-08   8.1e-05      32     128 ..      33     140 ..       6     152 .. 0.81

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 2.4e-08
                 EEE---------IIIIIHHHHTHHHH.HH----EEEEE-SS-HHHHHHHHH......TT.TSEEE------HHHHHT..-EE-----.....-EE--EEEEEE---EE CS
   PF08534.5  32 vlvfvpgafcptCsaehpyleklaklakekgvdvvavvaqndafvkeawak......eglkipvlsDesasfakalglrltedasag.....irtpryavidedgkvv 128
                  l++ pg ++p+ ++e+ +++ la ++ +++ +v+a++ +  a  + ++++       ++++p+++D++ ++a++l++  +e ++a         +++ +i  d+kv+
  MMETSP1325-20131115|2897_1  33 CLFSHPGDYTPVGTTELGEMARLAPQFDSRDAKVIALSCDHLANHQGWIQDvkaatgFDVNFPIIADPGRDTAAQLKMIKMEHRGADtrglpRTVRAVLIIGPDKKVK 140
                 58999********************************9999999777777677779999*********9999999998877777766766744444445555666766 PP

>> PF10417.4  C-terminal domain of 1-Cys peroxiredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   2.3e-07    0.0008       1      34 [.     162     195 ..     162     199 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 2.3e-07
                 HHH---TSS-B--TTT.T----BE---SSHHHHH CS
   PF10417.4   1 ALQladkhgvatPAnWkPGdkvivpPppteeeav 34 
                 ALQ++  + v tP+nW++ ++vi++P  + + a 
  MMETSP1325-20131115|2897_1 162 ALQVSSLESVHTPVNWVKSQDVIISPDMPTDAAL 195
                 89**********************9987777555 PP

>> PF13911.1  AhpC/TSA antioxidant enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   7.8e-06     0.027       3      70 ..      53     126 ..      51     203 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 7.8e-06
   PF13911.1   3 sadkpeleaagiklvaigigdpasaekFcdl....tgf..pfelyvDpdaklyralglykglklglapgslqkv 70 
                 ++++p+++++  k++a++++  a+ + +++     tgf  +f++++Dp ++  ++l++ k+  +g+ ++ l + 
  MMETSP1325-20131115|2897_1  53 ARLAPQFDSRDAKVIALSCDHLANHQGWIQDvkaaTGFdvNFPIIADPGRDTAAQLKMIKMEHRGADTRGLPRT 126
                 6789******************889999977788877766999***************9877766665555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 1018.45
//
Query:       MMETSP1325-20131115|2896_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   14.2   0.2      0.077   13.0   0.0    1.8  2  PF02827.11 cAMP-dependent protein kinase inhibitor
        3.4    5.7   6.4        3.7    5.6   4.4    1.1  1  PF05616.8  Neisseria meningitidis TspB protein


Domain annotation for each model (and alignments):
>> PF02827.11  cAMP-dependent protein kinase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.63   4.3e+03      28      39 ..      32      43 ..      27      57 .. 0.67
   2 ?   13.0   0.0   1.1e-05     0.077      30      63 ..      70     101 ..      62     115 .. 0.63

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.63
  PF02827.11 28 seavggsseLal 39
                s+ v+ s+ L++
  MMETSP1325-20131115|2896_1 32 SQPVPDSNALPQ 43
                555666666654 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.1e-05
  PF02827.11  30 avggsseLalklaeLdvekeegeekgeesaseqs 63 
                  +  s eL++k++eL++  + ++  g+es  +q 
  MMETSP1325-20131115|2896_1  70 TSTTSTELPVKMGELTI-RDPADV-GAESGGTQR 101
                 445679***********.333333.444333332 PP

>> PF05616.8  Neisseria meningitidis TspB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   4.4   0.00055       3.7     333     385 ..      11      64 ..       1      84 [. 0.74

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.00055
   PF05616.8 333 pevspaenpannedpdendg.trpnpepdpdlnpdanpdtdgqpgtrpdspavp 385
                  ++  a n +++  p + d  ++p p+ +   +p a pd+dgq  t p  p+  
  MMETSP1325-20131115|2896_1  11 SATGGAGNVQEEAGPTDSDLwSQPVPDSNALPQPAARPDADGQATTPPPPPTDA 64 
                 455567788888888877642677777777788999**********99988744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 609.07
//
Query:       MMETSP1325-20131115|2899_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       549  (0.0401551); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.57
# Mc/sec: 698.25
//
Query:       MMETSP1325-20131115|2900_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.64
# Mc/sec: 576.62
//
Query:       MMETSP1325-20131115|2901_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.4e-15   55.1   1.2    8.9e-15   54.4   0.8    1.4  1  PF10170.4 Cysteine-rich domain
  ------ inclusion threshold ------
      0.014   15.5   0.1      0.023   14.8   0.1    1.3  1  PF04690.8 YABBY protein
      0.018   14.1   0.1      0.024   13.7   0.0    1.1  1  PF13324.1 Grap2 and cyclin-D-interacting
       0.73    9.7   6.2        1.7    8.5   4.3    1.6  1  PF12172.3 Rubredoxin-like zinc ribbon domain (DUF35_N)


Domain annotation for each model (and alignments):
>> PF10170.4  Cysteine-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   0.8   2.6e-18   8.9e-15      33      94 ..       2      64 ..       1      67 [. 0.90

  Alignments for each domain:
  == domain 1    score: 54.4 bits;  conditional E-value: 2.6e-18
   PF10170.4 33 vmkdpfssd.kekflilGskcslcskavcvgaecslfytkrfclpcvkeelkefpkeiqaele 94
                vmkdpf  +  +  l+lG  c+ c+k+vcv ++cslfy++r+c  c  +  ++ p+e++ el+
  MMETSP1325-20131115|2901_1  2 VMKDPFVDQaANAPLVLGGVCAACDKIVCVSPSCSLFYARRICATCCARLKDALPVELKMELS 64
                8*****66515678*******************************************998875 PP

>> PF04690.8  YABBY protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   6.8e-06     0.023      15     125 ..      22     125 ..      14     131 .. 0.59

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 6.8e-06
   PF04690.8  15 CnfCntilavsvPstslfkvvtvrCGhCtsl...lsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrv 125
                 C+ C+ i+ vs Ps slf    +   +C+ l   l v+l++    l              +e +++e++++++n+  + +++      + ++ +d+e  +++++  PPek++ v
  MMETSP1325-20131115|2901_1  22 CAACDKIVCVS-PSCSLFYARRICATCCARLkdaLPVELKMELSRLEPRT---------PAEGEEDEGRSVHENQAGSAEKEGGDDRGEATDRHDQEQRHQQQTRTPPEKQRGV 125
                 999*****998.99999998888777777662223344443332222222.........2233333344444444444333333333334556677777778889999997655 PP

>> PF13324.1  Grap2 and cyclin-D-interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   6.9e-06     0.024      95     177 ..      10      98 ..       4     108 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 6.9e-06
   PF13324.1  95 rkqaipqltgsVweACsalkkv.PktNlaAigraltqvavlvKDvl.....rEmkelkegkaldesedsesdssssdddlegldlndDe 177
                 +  + p + g V +AC+++  v P+  l  + r+ + +   +KD+l      E+ +l++ ++++ +ed+ +  ++++  + +++++dD+
  MMETSP1325-20131115|2901_1  10 QAANAPLVLGGVCAACDKIVCVsPSCSLFYARRICATCCARLKDALpvelkMELSRLEPRTPAEGEEDEGRSVHENQAGSAEKEGGDDR 98 
                 6678899***********988769999******************954444488889888899*****************999999995 PP

>> PF12172.3  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   4.3    0.0005       1.7       9      31 ..      17      47 ..      10      50 .. 0.91

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0005
   PF12172.3  9 LlgqrCreCGrv........qfPPravCpnC 31
                 lg++C +C+++         f++r++C  C
  MMETSP1325-20131115|2901_1 17 VLGGVCAACDKIvcvspscsLFYARRICATC 47
                689*************************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       515  (0.0376682); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.63
# Mc/sec: 646.64
//
Query:       MMETSP1325-20131115|2903_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.6   0.0       0.13   11.4   0.0    1.1  1  PF11794.3 4-hydroxyphenylacetate 3-hydroxylase N terminal


Domain annotation for each model (and alignments):
>> PF11794.3  4-hydroxyphenylacetate 3-hydroxylase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   9.8e-06      0.13      83     135 ..       8      66 ..       2      75 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 9.8e-06
                 HHHHHHHHHHTSS---T...-THHHHHHHHHHHHCGHH---...HHHHHHHHHHHHHHH CS
   PF11794.3  83 rkairllarktgGcmgR...spDalnallvtlaaaaeklgt...yaenikkylkyvqen 135
                  +a+ ++++++++c+gR   + ++  al++t+   + ++++    ae++ +y  ++ +n
  MMETSP1325-20131115|2903_1   8 ARALLAVSNEVAACFGRapaALEMGDALVITMTHTRWAWQNkeaIAERALEYATRILDN 66 
                 567778999********4444444568999999999888888999******99988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.62
# Mc/sec: 340.13
//
Query:       MMETSP1325-20131115|2904_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       884  (0.0646577); expected 273.4 (0.02)
Passed bias filter:                      512  (0.0374488); expected 273.4 (0.02)
Passed Vit filter:                       118  (0.00863078); expected 13.7 (0.001)
Passed Fwd filter:                        52  (0.00380339); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.42s 00:00:01.00 Elapsed: 00:00:00.81
# Mc/sec: 201.18
//
Query:       MMETSP1325-20131115|2902_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.67
# Mc/sec: 600.88
//
Query:       MMETSP1325-20131115|2906_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 690.71
//
Query:       MMETSP1325-20131115|2908_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 231.08
//
Query:       MMETSP1325-20131115|2905_1  [L=352]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.5   1.9      0.059   12.9   0.2    2.1  2  PF00130.17 Phorbol esters/diacylglycerol binding domain (C1 domain)
       0.34   10.5   3.9        0.8    9.3   0.3    2.5  2  PF14446.1  Prokaryotic RING finger family 1


Domain annotation for each model (and alignments):
>> PF00130.17  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   8.7e-06     0.059      13      45 ..      65     100 ..      61     106 .. 0.85
   2 ?   -2.2   0.0      0.47   3.2e+03      13      18 ..     210     215 ..     200     222 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 8.7e-06
                 B-TTT-SB-.--.------EETTT--B.--STT--- CS
  PF00130.17  13 fCkhCgkfl.wg.kgkqglkCswCqll.vHkkCfek 45 
                  C+ C+k+l ++ ++   l+C+  +++ vH+kCfek
  MMETSP1325-20131115|2905_1  65 ICDLCEKPLdRQtEAVALLTCEVGHVNrVHQKCFEK 100
                 5********855599999******9754******97 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.47
                 B-TTT- CS
  PF00130.17  13 fCkhCg 18 
                  C  C+
  MMETSP1325-20131115|2905_1 210 QCRRCA 215
                 455554 PP

>> PF14446.1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.3   0.00012       0.8       5      38 ..      63     100 ..      60     103 .. 0.80
   2 ?    1.4   0.1     0.034   2.3e+02      20      31 ..     207     218 ..     196     224 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00012
   PF14446.1   5 ktrCavCgkklkdkddivvCpeCgapy....HreCwee 38 
                 +  C++C+k+l  ++ +v+  +C+  +    H++C+e+
  MMETSP1325-20131115|2905_1  63 SLICDLCEKPLDRQTEAVALLTCEVGHvnrvHQKCFEK 100
                 568***************99999865433339999876 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.034
   PF14446.1  20 divvCpeCgapy 31 
                  + +C +C a+ 
  MMETSP1325-20131115|2905_1 207 ELGQCRRCAAKT 218
                 445777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1130  (0.0826507); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.70
# Mc/sec: 1205.03
//
Query:       MMETSP1325-20131115|2909_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 371.85
//
Query:       MMETSP1325-20131115|2910_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.41s 00:00:00.69 Elapsed: 00:00:00.62
# Mc/sec: 243.50
//
Query:       MMETSP1325-20131115|2912_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 632.64
//
Query:       MMETSP1325-20131115|2916_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   13.2   1.7      0.064   12.7   1.2    1.1  1  PF11026.3 Protein of unknown function (DUF2721)


Domain annotation for each model (and alignments):
>> PF11026.3  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.2   4.7e-06     0.064      68     119 ..      22      71 ..      10      77 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.7e-06
   PF11026.3  68 latlsallivlvilllflsallelelslavailFilallllilslllflrEi 119
                 la++s+  i+++++++ l    + +l l+va++F++ +   ++s ++f+r +
  MMETSP1325-20131115|2916_1  22 LACVSVSNICMIVVAYGL--NPRSQLVLVVAAIFGFLMCITVGSGVVFMRCV 71 
                 333444444444444444..6689*************************966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       573  (0.0419105); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|2917_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0071   15.4   0.0      0.011   14.7   0.0    1.3  1  PF00069.20 Protein kinase domain
  ------ inclusion threshold ------
        1.1    7.2   5.3        1.4    6.8   3.6    1.1  1  PF05053.8  Menin


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.7e-06     0.011     227     260 .]      10      43 ..       2      43 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.7e-06
                 SHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 227 sskseelkdlikkllekdpakRltaeeilkhpwl 260
                 ++ks+el+d+++  lekdp++R+++e++ +h w+
  MMETSP1325-20131115|2917_1  10 EPKSPELQDILHGFLEKDPTERISLEDASEHVWF 43 
                 45669**************************998 PP

>> PF05053.8  Menin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.6   0.00021       1.4     446     559 ..      91     203 ..      84     213 .. 0.69

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00021
   PF05053.8 446 kfdadirqkvvivlkekeakeseeaageeareGrrrgarkeekseepsgsesdnpelpannknsnsk.knane.gadkkeaaatagkaattengssasvqlpvsseapevkeapvi 559
                  f +d r+k++i++   +++  e +++    +   ++a  e+ s  p+ s   +p+  +  + s +   +a++ +++  ++aa+  +  + +++ s++ ++ vs+ea e   ap  
  MMETSP1325-20131115|2917_1  91 TFTKDTRRKMSIIQAPGQTNIWEAQSSGANSNQMDKMAEEEDESASPAPSPVAEPAALSPTDPSIPAtSTAASaAPTAASTAAVVDQIGKKKKEGSSDYPAAVSAEARE---APAA 203
                 69999*******998877766666666666667999***********99988888765544444433033334255566666777777777777777777777776644...5554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       567  (0.0414716); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.69
# Mc/sec: 809.20
//
Query:       MMETSP1325-20131115|2918_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 176.34
//
Query:       MMETSP1325-20131115|2913_1  [L=686]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.96u 0.38s 00:00:01.34 Elapsed: 00:00:00.76
# Mc/sec: 2163.03
//
Query:       MMETSP1325-20131115|2911_1  [L=559]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-15   56.2   0.0    8.4e-15   55.0   0.0    1.7  1  PF00300.17 Histidine phosphatase superfamily (branch 1)
    1.1e-14   53.9   0.0    2.5e-14   52.7   0.0    1.7  1  PF00168.25 C2 domain
  ------ inclusion threshold ------
       0.08   12.4   0.1       0.08   12.4   0.1    2.4  3  PF12607.3  Protein of unknown function (DUF3772)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.0   1.8e-18   8.4e-15       1     158 []     172     422 ..     172     422 .. 0.73

  Alignments for each domain:
  == domain 1    score: 55.0 bits;  conditional E-value: 1.8e-18
                 EEEEEE---BHCCCTTBGGGTCC.........--B-----HHHHHHHTHHHH.......................................................TTHCESEEEEESSHHHHHHHHH.HCCCCE.....EEEEE.GGGSHHHH.---.....................-.TTCHHHHHHHHHCHHHHHHHHCCTSTTT...............SS.CHHHHHHHHHHHHHHHHH....HCTTTSEEEEEE-TTHHHHH CS
  PF00300.17   1 rlylvRHGeselnkegrlqgwsd.........vpLtekGreqarelgkkLkr.......................................................adlqidavytSplkRaiqTaei.lleeld.....ipiiqeprLrerdf.gew.....................e.glpkaevkeelpeeyekwkrdkkefrpp...............egesladvyeRvapfleelie....akdkgenvlivsHggvlral 158
                 +l+lvRHGes +n+    qg+++         ++Lt+ G +qa++l  ++k+                                                       + l   +v++Spl+Ra+qT+ + l+++         ++    Lre+   g++                       g+++ae+ +                  +                +es  +v +R+ ++l +l      + ++ ++ ++v+H +  ra+
  MMETSP1325-20131115|2911_1 172 TLFLVRHGESLWNQ---AQGNKNlsammkqydHELTDLGVQQAQALNTRWKDlsreaeididappatiplssvrsilnpsedtprdssasmwgplmqewdedgrrlrSFLSTRCVFSSPLTRAVQTTLVgLQDHPAlrrgqHSLTLLRTLREVKNrGSYdsvgrysmadigphvktmlsvAvGNETAEALADV----------------EidthdavgewwlslvTQESKTQVSDRLDDILATLRYwtdsEGKPIDSAILVGHSHLFRAM 422
                 69**********96...44444444444444278***************999999**********************************************9999987788888************9997888444666665555666777777766553323332222111111111111133333333333................1333344444555555789*****************9*66666666666******999986 PP

>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.0   5.5e-18   2.5e-14       2      84 ..      33     120 ..      32     121 .. 0.92

  Alignments for each domain:
  == domain 1    score: 52.7 bits;  conditional E-value: 5.5e-18
                 EEEEEEESS--S-STSSSS-EEEEEEEECTTEEE.....EEE--BSS-SSEEEEEEEEEEESCGGGTEEEEEEEECHSSSCSEE---E CS
  PF00168.25   2 kvkvieAknLpnkdkngtsdpyvkvslggakskk.....krTrvikntlnPvWnekftfevvaeelaeleleVkdedrfgkddflGea 84 
                 +++++ + + p++d +g sd+y++vsl +   ++     +rT+ + n+ nPvW   ++f++ ++ ++ +++eV+d+d+ ++dd++G a
  MMETSP1325-20131115|2911_1  33 TIEILNGFDMPRMDLTGDSDCYAVVSLIDSVTERklvdpARTSPHYNERNPVWRSYLSFPILPHATDLVKIEVFDKDTYTRDDIIGAA 120
                 6899999**********************6654468899*********************99999999******************87 PP

>> PF12607.3  Protein of unknown function (DUF3772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.43     2e+03       1      16 [.     209     224 ..     209     226 .. 0.86
   2 ?   -3.7   0.1       1.9   8.7e+03      34      40 ..     242     248 ..     239     248 .. 0.82
   3 ?   12.4   0.1   1.8e-05      0.08      38      61 ..     256     279 ..     256     281 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.43
   PF12607.3   1 kqAeeaksrAdgLiae 16 
                 +qA+++ +r ++L++e
  MMETSP1325-20131115|2911_1 209 QQAQALNTRWKDLSRE 224
                 6999999999999876 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 1.9
   PF12607.3  34 pSPLnPa 40 
                  S+LnP+
  MMETSP1325-20131115|2911_1 242 RSILNPS 248
                 69****5 PP

  == domain 3    score: 12.4 bits;  conditional E-value: 1.8e-05
   PF12607.3  38 nPafWspaaaalpddlrrlaaeta 61 
                 +++ W+p+++++++d rrl+ +++
  MMETSP1325-20131115|2911_1 256 SASMWGPLMQEWDEDGRRLRSFLS 279
                 5789****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.86u 0.31s 00:00:01.17 Elapsed: 00:00:00.66
# Mc/sec: 2029.64
//
Query:       MMETSP1325-20131115|2920_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-16   57.1   3.6    9.5e-16   56.7   2.5    1.2  1  PF02953.10 Tim10/DDP family zinc finger
  ------ inclusion threshold ------
      0.024   14.5   0.3       0.04   13.8   0.1    1.4  2  PF11300.3  Protein of unknown function (DUF3102)
      0.055   12.4   0.1      0.069   12.1   0.1    1.2  1  PF04548.11 AIG1 family
      0.086   12.4   0.2       0.11   12.0   0.1    1.2  1  PF02847.12 MA3 domain


Domain annotation for each model (and alignments):
>> PF02953.10  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   2.5   2.8e-19   9.5e-16       6      65 ..      52     111 ..      47     112 .. 0.94

  Alignments for each domain:
  == domain 1    score: 56.7 bits;  conditional E-value: 2.8e-19
  PF02953.10   6 qelelanaqelvnkltekCfkkCvtkypgseLskgeesCldrCvekyldvnnlvskrlqe 65 
                 +++++ n ++++n+++e+Cf++Cv+++++s+Ls  e++C+++C++k+++  ++ + r+qe
  MMETSP1325-20131115|2920_1  52 EKMQMHNSSKTYNEMVEQCFNDCVKTFRSSTLSEAESKCVNSCAAKFIKLGRRAGYRYQE 111
                 678999*************************************************99997 PP

>> PF11300.3  Protein of unknown function (DUF3102)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   1.2e-05      0.04      81     119 ..      19      57 ..       7      69 .. 0.76
   2 ?   -3.0   0.0       1.8     6e+03      59      68 ..      95     104 ..      84     117 .. 0.56

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.2e-05
   PF11300.3  81 sqnskalsnltytqallLlgvpeeeReqflaeldvesms 119
                 ++  +++s++++t ++ L gvpe +R+++l+e +  +m 
  MMETSP1325-20131115|2920_1  19 RSGRDQKSSMSFTGTVKLDGVPEHQRNELLQEIEKMQMH 57 
                 355677899*********************987666653 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 1.8
   PF11300.3  59 aeklmrlyee 68 
                 a+k+++l + 
  MMETSP1325-20131115|2920_1  95 AAKFIKLGRR 104
                 4444444433 PP

>> PF04548.11  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1     2e-05     0.069     171     208 ..      41      78 ..      25      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2e-05
                 HHHHHHHHHHHHHHHHHT-------HHHHHHHHCCHHH CS
  PF04548.11 171 eeQvkellelveaivkenggkpytnelyekikeeaekl 208
                 e+Q++ell+ +e+++ +n+ k y + + + ++++ +++
  MMETSP1325-20131115|2920_1  41 EHQRNELLQEIEKMQMHNSSKTYNEMVEQCFNDCVKTF 78 
                 79*********************999988887776655 PP

>> PF02847.12  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   3.4e-05      0.11      29      73 ..      38      82 ..      34     102 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.4e-05
  PF02847.12 29 klp.kqhheivkillecalee.kktyneyyalLlsklceknlisskq 73
                ++p +q++e+++++ ++ +++ +ktyne++ + ++++++   + s++
  MMETSP1325-20131115|2920_1 38 GVPeHQRNELLQEIEKMQMHNsSKTYNEMVEQCFNDCVK--TFRSST 82
                57889*******************************994..444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1154  (0.0844061); expected 273.4 (0.02)
Passed bias filter:                      834  (0.0610006); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.42s 00:00:00.90 Elapsed: 00:00:00.61
# Mc/sec: 491.06
//
Query:       MMETSP1325-20131115|2921_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-19   67.2   0.0    8.8e-19   67.0   0.0    1.0  1  PF00085.15 Thioredoxin
     0.0064   16.5   0.2      0.056   13.5   0.1    1.9  1  PF13098.1  Thioredoxin-like domain
  ------ inclusion threshold ------
       0.12   11.9   0.0       0.14   11.7   0.0    1.1  1  PF12971.2  Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0   1.9e-22   8.8e-19      29      90 ..       2      62 ..       1      66 [. 0.95

  Alignments for each domain:
  == domain 1    score: 67.0 bits;  conditional E-value: 1.9e-22
                T---HHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEEEE-- CS
  PF00085.15 29 wCGhCkalaPeyeklaeelkekvvlakvdvdenkdlaseygvegiPtlklfkngkkveeveg 90
                wCG+Ck+++P + +la +++   v++ +d+de +d+a++y+++++Pt+k++k+g++v++++g
  MMETSP1325-20131115|2921_1  2 WCGPCKKIKPFFVELAARYS-GSVFLMIDCDELSDTAETYQIRAMPTFKVIKGGSEVASLNG 62
                ********************.778999******************************99887 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   1.2e-05     0.056      16     102 ..       2      63 ..       1      65 [. 0.75

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.2e-05
   PF13098.1  16 dCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpGy 102
                 +C+ Ckk+++   +   ++  ++     ++++id+++                   ++ ++++++r  Pt+ +++  G +va l+G+
  MMETSP1325-20131115|2921_1   2 WCGPCKKIKPFFVE---LAARYS---GSVFLMIDCDE------------------LSDTAETYQIRAMPTFKVIK-GGSEVASLNGL 63 
                 999***99999985...555654...44556666554..................34789999999999999996.58999998885 PP

>> PF12971.2  Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.1e-05      0.14      29      59 ..      34      64 ..      15      67 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.1e-05
                -.--EEEEEEE-----EEEE-----TTT---H CS
   PF12971.2 29 r.gldeFeissaksgkvlirGnsgvalatGln 59
                + + ++++i++ +    +i+G s va ++Gln
  MMETSP1325-20131115|2921_1 34 SdTAETYQIRA-MPTFKVIKGGSEVASLNGLN 64
                24899******.*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.60
# Mc/sec: 283.57
//
Query:       MMETSP1325-20131115|2926_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.61
# Mc/sec: 298.56
//
Query:       MMETSP1325-20131115|2923_1  [L=503]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.81u 0.38s 00:00:01.19 Elapsed: 00:00:00.68
# Mc/sec: 1772.60
//
Query:       MMETSP1325-20131115|2927_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 509.77
//
Query:       MMETSP1325-20131115|2928_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00039   19.8   5.0     0.0097   15.4   0.3    2.0  2  PF09498.5 Protein of unknown function (DUF2388)


Domain annotation for each model (and alignments):
>> PF09498.5  Protein of unknown function (DUF2388)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.3   0.00023       3.2      27      40 ..       8      21 ..       3      25 .. 0.86
   2 !   15.4   0.3   7.1e-07    0.0097      27      44 ..      31      48 ..      23      51 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00023
   PF09498.5 27 dDAasFVASdGeir 40
                dDAa+ +AS+G+ +
  MMETSP1325-20131115|2928_1  8 DDAAAALASAGKFQ 21
                9**********975 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 7.1e-07
   PF09498.5 27 dDAasFVASdGeirGarL 44
                dDAa+ +AS+G+ +Ga+L
  MMETSP1325-20131115|2928_1 31 DDAAAALASAGKFHGAYL 48
                9****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|2930_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-13   49.0   0.0    4.3e-13   49.0   0.0    1.0  1  PF01214.13 Casein kinase II regulatory subunit


Domain annotation for each model (and alignments):
>> PF01214.13  Casein kinase II regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   3.1e-17   4.3e-13      38      96 ..      10      64 ..       1      66 [] 0.86

  Alignments for each domain:
  == domain 1    score: 49.0 bits;  conditional E-value: 3.1e-17
  PF01214.13 38 nykealelildkekeeeeklkeekkseieksaellYglihaRyiltkkglqqmkekyee 96
                n++e+l+lild+ +++e    +e+++e +++a +lYglihaRyi+t++gl++m+ ky+ 
  MMETSP1325-20131115|2930_1 10 NFQECLDLILDRVDPDE----SEDDEEKTQAAMRLYGLIHARYIITSHGLNTMLAKYRG 64
                89*********998874....56677778999*************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.72
# Mc/sec: 219.67
//
Query:       MMETSP1325-20131115|2924_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-77  259.2   0.1    1.7e-77  258.9   0.1    1.1  1  PF00926.14 3,4-dihydroxy-2-butanone 4-phosphate synthase
     0.0001   21.5   0.0    0.00089   18.4   0.0    2.1  2  PF00925.15 GTP cyclohydrolase II


Domain annotation for each model (and alignments):
>> PF00926.14  3,4-dihydroxy-2-butanone 4-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.9   0.1   2.5e-81   1.7e-77       1     194 []     111     306 ..     111     306 .. 0.98

  Alignments for each domain:
  == domain 1    score: 258.9 bits;  conditional E-value: 2.5e-81
  PF00926.14   1 ieeaiealkaGklvivvDdedrEnegdlvvaAeavtpekvafmvrharGlicvalteeraeklgLppmvdkntsekktaftvsvdhak.gtttGIsaadRalTirkladekakaedfvrPGhvfplrakeggvlerrGhTEaavdLarlagltpaaviceildd.dgsmarleelkefakehglklitiedlieyr 194
                 +e+ i+a+ +G++viv+DdedrEnegdl++aAe +tpe++af++r+++G++cv +++er+e+l+Lp+mv++n+++k+taft+svd+   g++tGIsaadRa+T+r lad++++ + f rPGh+fplrak+gg  er GhTEa+vdL+rlagl++a+v+cei++  +  mar++el efakeh+l+++tiedli yr
  MMETSP1325-20131115|2924_1 111 VEKTIAAMGRGEVVIVTDDEDRENEGDLIMAAELATPETMAFFIRYTSGVLCVGMESERLEELDLPQMVPNNQDPKNTAFTLSVDALVgGISTGISAADRATTLRLLADGDSTSDMFCRPGHIFPLRAKAGGTIERGGHTEASVDLCRLAGLASAGVLCEIVTAdSMGMARMPELLEFAKEHDLAFTTIEDLICYR 306
                 6899*********************************************************************************88799************************************************************************99566**************************886 PP

>> PF00925.15  GTP cyclohydrolase II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.3e-07   0.00089     142     169 .]       2      29 ..       1      29 [. 0.95
   2 ?    0.7   0.0     0.036   2.5e+02      74      95 ..     113     134 ..      91     150 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.3e-07
  PF00925.15 142 kirLltnnpekieaLegfglevvervpl 169
                 +i+Lltnnp k+++Le+ g+++ +r p+
  MMETSP1325-20131115|2924_1   2 SIKLLTNNPFKVKSLEALGVKINDRLPM 29 
                 79***********************997 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.036
  PF00925.15  74 eriaeegrGvivyl.rqegrgig 95 
                 ++ia+ grG +v++ + e r  +
  MMETSP1325-20131115|2924_1 113 KTIAAMGRGEVVIVtDDEDR-EN 134
                 68999999999998455544.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:01.21
# Mc/sec: 649.59
//
Query:       MMETSP1325-20131115|2922_1  [L=687]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-50  169.8   0.0    4.1e-50  169.2   0.0    1.4  1  PF07002.11 Copine
      8e-24   83.1   0.0    3.4e-12   45.9   0.0    2.5  2  PF00168.25 C2 domain
    0.00043   20.3   0.0     0.0013   18.7   0.0    1.6  1  PF13519.1  von Willebrand factor type A domain
  ------ inclusion threshold ------
      0.025   14.1   0.1      0.052   13.1   0.0    1.4  1  PF00092.23 von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> PF07002.11  Copine
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.2   0.0   1.2e-53   4.1e-50       9     146 .]     335     472 ..     323     472 .. 0.95

  Alignments for each domain:
  == domain 1    score: 169.2 bits;  conditional E-value: 1.2e-53
  PF07002.11   9 qpnpYekaisavgeilqkydedkkipafGFGaklpedlevshefalnlesedkeveglegvleaYrevlpnlqlsgPtnfapiiekaaeiaea.sakkkkqYhvLliiadGqvtdeketidaivkaselplSiilvGvG 146
                  pnpYe+ i+ ++++l++yd+d+++p++GFGa+ p d +vsh+f+ln++++++ v+g++gvl+aY+++l++  lsgPtnfa+ii +a+++ ++  +++kk+Y++Llii+dG +td+++t++aiv+a+ lp+Sii+vGvG
  MMETSP1325-20131115|2922_1 335 PPNPYEQTITGLASVLEQYDSDQQLPCYGFGARGP-DRKVSHCFPLNGNPQNPYVHGVQGVLNAYHHALTQWGLSGPTNFAQIIGAASSMSQRhVQQQKKTYTILLIITDGAITDMQATKNAIVAAAALPMSIIIVGVG 472
                 58******************************988.99*****************************************************99889999***************************************9 PP

>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   9.9e-16   3.4e-12       6      80 ..      30     102 ..      28     111 .. 0.94
   2 !   34.5   0.0   3.4e-12   1.2e-08       8      84 ..     162     245 ..     159     246 .. 0.90

  Alignments for each domain:
  == domain 1    score: 45.9 bits;  conditional E-value: 9.9e-16
                 EEESS--S-STSSSS-EEEEEEEECTTEEEEEE--BSS-SSEEEEEEEEEEESCGGGTEEEEEEEECHSSSCSEE CS
  PF00168.25   6 ieAknLpnkdkngtsdpyvkvslggakskkkrTrvikntlnPvWnekftfevvaeelaeleleVkdedrfgkddf 80 
                 i+A +L+++d +++sd++++v+++g ++   rT+v+ ++++P + ++f+++  +ee++++ + ++dedr+g++d+
  MMETSP1325-20131115|2922_1  30 ISASGLKKMDTFSNSDAFCVVYINGIEV--GRTEVVYDNQSPHFTKQFQLDYFFEEVQDVLILCYDEDRKGSHDL 102
                 89***********************888..9****************************************9664 PP

  == domain 2    score: 34.5 bits;  conditional E-value: 3.4e-12
                 ESS--S-S.TSSSS-EEEEEEEECTTE...EEEEE--BSS-SSEEEE.EEEEEE.ESCGGGTE.EEEEEEECHSSSCSEE---E CS
  PF00168.25   8 AknLpnkd.kngtsdpyvkvslggaks...kkkrTrvikntlnPvWn.ekftfe.vvaeelae.leleVkdedrfgkddflGea 84 
                 +k+L nkd ++g+sdp+ +++ + ++      +++  i n+lnP+W  + ++++ + + ++++ l++eV+d++++gk+d +G +
  MMETSP1325-20131115|2922_1 162 GKKLVNKDgMFGKSDPFFTIKRSREDGswiPVYKSIHIMNNLNPTWPgDMLSVQqLANGDMHRpLRIEVWDYEKDGKHDAMGAV 245
                 789999998999************99955555***************8999999888888888******************987 PP

>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   3.7e-07    0.0013       2     138 ..     305     475 ..     304     518 .. 0.71

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 3.7e-07
   PF13519.1   2 lvlvlDvSgSMnaedv..............sptrldaakaalkdlldelpgd.rvglvafsgsa....elva...........p.ltsdraalkaalnsldprlmpgggtnlaaalalalell....akadgrraaivlvtDGedn..ssdieaasalkragikiyvvgvgsde 138
                 +v+ +D +gS                    +p+  +++   l+++l+++++d ++   +f+ +        +           p ++  + + ++a +++ ++   +g tn a+ + +a+ +     ++++++ + ++++tDG+ +  + + +a+ a+++    i +vgvg ++
  MMETSP1325-20131115|2922_1 305 MVVGIDFTGSNGNPAQpgtlhycnlqgggaPPNPYEQTITGLASVLEQYDSDqQLPCYGFGARGpdrkV--ShcfplngnpqnPyVHGVQGV-LNAYHHALTQWGLSGPTNFAQIIGAASSMSqrhvQQQKKTYTILLIITDGAITdmQATKNAIVAAAALPMSIIIVGVGNEQ 475
                 67778888888555335566666666665579999*************99777********97433220..233333333222212233444.44444444477789*************8872222455577799*******8885455556999**************9875 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.5e-05     0.052      76     142 ..     408     473 ..     400     493 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.5e-05
                 TS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE-----C---STHHHHHHHHHHGEEEEEEEE-- CS
  PF00092.23  76 gggtntgkALkyalenlfssaagsrenapkvvillTDGksndggspeaaaaklrekklgitvfgvGv 142
                 +g tn ++ + +a ++ ++ +    +++  +++++TDG  +d + +++a++++++  + i+++gvG 
  MMETSP1325-20131115|2922_1 408 SGPTNFAQIIGAASSMSQR-HVQQQKKTYTILLIITDGAITDMQATKNAIVAAAALPMSIIIVGVGN 473
                 6778888888888888554.4666689999************************9988888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (687 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.99u 0.36s 00:00:01.35 Elapsed: 00:00:00.62
# Mc/sec: 2655.32
//
Query:       MMETSP1325-20131115|2931_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 714.02
//
Query:       MMETSP1325-20131115|2931_2  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 695.87
//
Query:       MMETSP1325-20131115|2932_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|2933_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 333.92
//
Query:       MMETSP1325-20131115|2934_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.79
# Mc/sec: 364.00
//
Query:       MMETSP1325-20131115|2935_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.7   0.0        0.1   12.4   0.0    1.3  1  PF08783.6 DWNN domain


Domain annotation for each model (and alignments):
>> PF08783.6  DWNN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.3e-06       0.1      37      59 ..      40      62 ..      22      68 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.3e-06
   PF08783.6 37 gkgtdfdLklynaqtkeeyeddn 59
                ++g dfdL +y++q ++ey d+ 
  MMETSP1325-20131115|2935_1 40 TDGLDFDLTVYDDQVDTEYVDEG 62
                57889**************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.33s 00:00:00.68 Elapsed: 00:00:00.62
# Mc/sec: 347.86
//
Query:       MMETSP1325-20131115|2938_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-24   86.1   0.0    2.9e-24   85.0   0.0    1.6  1  PF07039.6  SGF29 tudor-like domain
    3.4e-08   33.1   0.0    6.6e-08   32.1   0.0    1.4  1  PF13867.1  Sin3 binding region of histone deacetylase complex subunit SAP30
     0.0048   16.6   0.0     0.0093   15.6   0.0    1.4  1  PF00567.19 Tudor domain
     0.0083   16.1   0.2       0.93    9.5   0.1    2.8  3  PF05641.7  Agenet domain


Domain annotation for each model (and alignments):
>> PF07039.6  SGF29 tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.0   0.0   8.3e-28   2.9e-24       2     129 ..     120     244 ..     119     245 .. 0.91

  Alignments for each domain:
  == domain 1    score: 85.0 bits;  conditional E-value: 8.3e-28
   PF07039.6   2 kgdkVAakvkkedeeeewilaevvsvekeekryevqDvddeeekktyklsrkkiiplPk.klsketsklaefpkgskVLAlYPdTtaFYkAtVvatpk...kkedeykleFeddeeedke...reVkkryVvalp 129
                 +g++V +k++k++e++ wila+v ++  ++  +evqD+dde          +k+++lP+ ++++ +++    +kg  VLA++PdTt+FY+At++++ k   +  +e  ++Fedde+e ++   r+V++ryV++ p
  MMETSP1325-20131115|2938_1 120 PGEQVGVKLTKGEENGSWILATVSRYYPDSDIFEVQDEDDE----------SKLLKLPSeNVERLEDSVDGLAKGDMVLAVFPDTTSFYRATISKPVKrssQGMSEVFVQFEDDEDETGRtphRRVTARYVMHNP 244
                 89*************************************99..........699999998889999999**************************96532256677889*********99999********9876 PP

>> PF13867.1  Sin3 binding region of histone deacetylase complex subunit SAP30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   1.9e-11   6.6e-08       2      49 ..      30      79 ..      29      81 .. 0.85

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 1.9e-11
   PF13867.1  2 evdtLrrYkkhfklkqkprvsKeqLanaVrkHFnsqp..vdEqevIagFl 49
                +  +L  Y  h++++ +p+++K++La aV++HF+     vd + +I gFl
  MMETSP1325-20131115|2938_1 30 DEQSLAAYVSHYNIQVRPDLTKAELAVAVARHFEIEIkvVDDEGAINGFL 79
                678999***************************85444777777888887 PP

>> PF00567.19  Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.7e-06    0.0093      10      86 ..     141     217 ..     133     222 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 2.7e-06
                 EEEEE-TTSCEEE.EECCCHHHHHHHHHHHHCHHHHS-B..--------EEEEE-TTT--EEEEEE...EEEE---EEEEE CS
  PF00567.19  10 vvteiespgkfyv.qpkeqdkkleklteelqeyyaskkpveslapkvgdgcvalfsedgkwyRAki...tvslddekveVl 86 
                 +v+++  +++++  q++++++kl kl +e  e  +          ++gd+++a+f++  ++yRA+i    + +++++ eV+
  MMETSP1325-20131115|2938_1 141 TVSRYYPDSDIFEvQDEDDESKLLKLPSENVERLEDSVD----GLAKGDMVLAVFPDTTSFYRATIskpVKRSSQGMSEVF 217
                 677777788888888899999999998776666666666....699********************987555566666655 PP

>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.1     7e+03      32      47 ..      33      49 ..      27      56 .. 0.68
   2 !    9.5   0.1   0.00027      0.93       2      54 ..     119     170 ..     118     180 .. 0.74
   3 ?    3.4   0.0     0.022        74      18      49 ..     195     231 ..     190     244 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.1
   PF05641.7 32 s.kykveyddlsledge 47
                s  ++v++ ++++  + 
  MMETSP1325-20131115|2938_1 33 SlAAYVSHYNIQVRPDL 49
                35678888888877665 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00027
   PF05641.7   2 skGseVEVsseeeglrgaWfrAkVlkelkeskykveyddlsledgeskllket 54 
                 ++G +V V+  + +  g+W  A+V  +  +   ++e++d ++e    kl+ e+
  MMETSP1325-20131115|2938_1 119 KPGEQVGVKLTKGEENGSWILATVSRYYPD-SDIFEVQDEDDESKLLKLPSEN 170
                 7899*********************99999.5666664444443333334444 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.022
   PF05641.7  18 gaWfrAkVlkelkes.....kykveyddlsledgesk 49 
                 ++ +rA++ k  k+s     ++ v+++d ++e+g  +
  MMETSP1325-20131115|2938_1 195 TSFYRATISKPVKRSsqgmsEVFVQFEDDEDETGRTP 231
                 689*******9999999999******99999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.34s 00:00:00.94 Elapsed: 00:00:00.56
# Mc/sec: 1278.06
//
Query:       MMETSP1325-20131115|2936_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   13.6   2.5      0.063   12.8   1.7    1.5  1  PF06911.7 Senescence-associated protein


Domain annotation for each model (and alignments):
>> PF06911.7  Senescence-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.7   4.6e-06     0.063      51     153 ..      26     138 ..      15     147 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.6e-06
   PF06911.7  51 rlkkvkklskatakvssktlggvgkvagnvgaalaksiqg.............keedgkaekaftgark.valasldafskvldgleeaaktllkslsdattkvVehkYGeeAgevt 153
                  +++v kl+k +    + + + ++ +a+++ a l  ++++             +    ++++a+    +  a++ ++ f++vldg+ +aa++  +++s       +++Y ++A++++
  MMETSP1325-20131115|2936_1  26 EVQVVDKLKKPANINWKVYMSDIVGIASSMKAHLKATYKKagmnkqqwfekvfYPHVCAQSQAIATHDGiTAATLMKKFTTVLDGITTAARQQKTNTS----AFAAETYHDQAAQMA 138
                 55555555555555556666666666666666666666666666666666666444455667788888867777899**************9766655....556778888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       970  (0.0709479); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 1233.13
//
Query:       MMETSP1325-20131115|2940_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-12   46.9   0.0    2.4e-12   46.7   0.0    1.0  1  PF11071.3 Protein of unknown function (DUF2872)


Domain annotation for each model (and alignments):
>> PF11071.3  Protein of unknown function (DUF2872)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   0.0   1.8e-16   2.4e-12      94     141 .]       2      49 ..       1      49 [. 0.97

  Alignments for each domain:
  == domain 1    score: 46.7 bits;  conditional E-value: 1.8e-16
   PF11071.3  94 glaaalgkslivlheeelahpLkevdaaalavaetpeqvveilkyvle 141
                 g+a algk++i+lh++el h Lkev+++ala +++peqvve+l+yv+e
  MMETSP1325-20131115|2940_1   2 GYAGALGKPIITLHPKELGHMLKEVNSTALASCREPEQVVEALAYVIE 49 
                 8999******************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|2939_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-43  148.5   0.0    1.8e-43  148.1   0.0    1.1  1  PF07162.6  Ciliary basal body-associated, B9 protein
  ------ inclusion threshold ------
      0.023   14.3   0.0      0.036   13.7   0.0    1.3  1  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF07162.6  Ciliary basal body-associated, B9 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.1   0.0   2.6e-47   1.8e-43       1     167 [.       2     174 ..       2     175 .. 0.93

  Alignments for each domain:
  == domain 1    score: 148.1 bits;  conditional E-value: 2.6e-47
   PF07162.6   1 rvfviGeiesAegfeednlfvryelvlgpdwk........llsgeslsgvtqtarskelknddvavfshpfdlelkttnpkgwPqLvvtvlsldswgrerleGYgyvevPlkpgkheitvplwrpvssslveklrsfflGgspeledksilasgldrfglktestGsVklrlnvi 167
                 +v+++Ge+ +A +++  nl++++++ +  +++        l+sg++ +g tq++ ++  +n+++av++hp+d+ + +++ k+wP+L+++++s+d +gr++++GYg+v +P  pg+he+++ +wrp  ++++e+l + flGg p+l +++ +   ++r+ lkte+ G V+++l+vi
  MMETSP1325-20131115|2939_1   2 EVHLVGELTKAVDIDLPNLHCHWKMLTEDKTEkhdaqhwvLISGAD-EGFTQISAASASHNQASAVWNHPLDMYYASSSVKKWPHLYIEIWSQDNFGRNDIAGYGVVLIPAVPGTHELECVIWRP-YGTFMERLSASFLGGWPQLTNPEKTVLDESRYPLKTETVGVVHITLSVI 174
                 589**********************887666633333333666666.******************************************************************************.*********************9999999*******************98 PP

>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.3e-06     0.036      39      82 ..      57     103 ..      16     105 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 5.3e-06
                 --BSS-SSEEEEEEEEEEESCGGGTE...EEEEEEECHSSSCSEE-- CS
  PF00168.25  39 rvikntlnPvWnekftfevvaeelae...leleVkdedrfgkddflG 82 
                 +  +n+ + vWn  + ++    ++++   l +e++ +d+fg++d+ G
  MMETSP1325-20131115|2939_1  57 SASHNQASAVWNHPLDMYYASSSVKKwphLYIEIWSQDNFGRNDIAG 103
                 455677999***99999988888888999***************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 928.59
//
Query:       MMETSP1325-20131115|2942_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-05   22.2   0.0    8.9e-05   22.2   0.0    1.1  1  PF13344.1  Haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.076   13.4   0.0      0.077   13.4   0.0    1.1  1  PF00702.21 haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF13344.1  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   1.3e-08   8.9e-05      13      45 ..      18      50 ..       8      66 .] 0.80

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 1.3e-08
   PF13344.1 13 dkaipgaaealkalraagkpvvllTNnssksee 45
                 +++pgaaea+ +l++ag +v ++TN++s s+ 
  MMETSP1325-20131115|2942_1 18 FELLPGAAEAVSRLESAGHTVSIVTNQASISKG 50
                579************************999854 PP

>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.1e-05     0.077     120     144 ..      19      44 ..      10      64 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.1e-05
                 EBHHHHHHHHHHHHHTTC.EEEEESS CS
                 xxxxxxxxxxxxxxxxxx.xxxxxxx RF
  PF00702.21 120 pvkpeaaeavasLkaagi.vvlltgd 144
                 ++ p+aaeav +L +ag  v ++t+ 
  MMETSP1325-20131115|2942_1  19 ELLPGAAEAVSRLESAGHtVSIVTNQ 44 
                 588*********************43 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 316.32
//
Query:       MMETSP1325-20131115|2937_1  [L=559]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-90  302.7   0.0    3.2e-90  302.4   0.0    1.1  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.4   0.0   2.3e-94   3.2e-90       3     316 .]     253     559 .]     251     559 .] 0.95

  Alignments for each domain:
  == domain 1    score: 302.4 bits;  conditional E-value: 2.3e-94
                 HHHHHT-TT---EESSTT---EEE-TT-......----TTHHHHHHH-------TTT--------B-HHHHHHHT.T----CCHHHTT-HHHHHHHHHHH..HS--GG...GT-BSEE.EEE----EEEEES-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--....-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT.------ CS
  PF00632.20   3 lskellnpklglfyvyessgllypnkplsrdsdleessndnlklfkflGkligkaiyegilldlpfsraflkflllgkkvtledleeidpelanslkellelessteavedlaltFtieedkkedeielvelipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrks...ededrLPtasTCfnyLkLpdYsskeilkekLltAieegqegFels 316
                 l++ +++p++glf   +s++llypn+ +      ++   d+l+ f f+G+++gka+y++il+    + +fl++ll g+   ++dl+ +dpe++++l +l+++ +s  ++edlaltFt++ +++++++ ++el+p+G+++ Vtn n  +Yi  ++n++l+++ + q +af++Gf+++i+ e++++f+++el+++i G+ + id+e+lr++t+++ggy+ ++p ++++w++l+e++p+++ +fLkFvT+s+r Pl+Gf+ ++p+++i+++    +  +rLP+a TC+n+LkLpdY+s e+l+e+L +Ai+ +  gFe+s
  MMETSP1325-20131115|2937_1 253 LAERAFDPQYGLF-NVTSEQLLYPNPAS------PTLADDHLSHFAFMGRVLGKAVYDKILVRPAYASFFLNKLL-GRVNHIDDLYTLDPEVYRNLMSLKDIARSGGDIEDLALTFTVT-TGGYGSHVQTELVPGGSEMAVTNGNYFRYIAATANFKLNRETAAQSHAFLRGFHDIINVEWIRMFDARELQMVIGGETRAIDIENLREHTRVSGGYHDSQPIMQWFWQVLRELTPQQQGDFLKFVTSSPRQPLLGFEYMQPPICIQKVPmgeDGPSRLPSAATCMNLLKLPDYPSFEVLRERLMYAISAN-AGFEMS 559
                 68899********.67778999999774......6667799**********************************.88899************************************96.556888889*********************************************************************99*******************************************************************9966444449*******************************98.99*986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.84u 0.32s 00:00:01.15 Elapsed: 00:00:00.50
# Mc/sec: 2679.13
//
Query:       MMETSP1325-20131115|2943_1  [L=525]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1104  (0.080749); expected 273.4 (0.02)
Passed bias filter:                      480  (0.0351083); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.03u 0.39s 00:00:01.42 Elapsed: 00:00:00.61
# Mc/sec: 2062.44
//
Query:       MMETSP1325-20131115|2948_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 417.14
//
Query:       MMETSP1325-20131115|2946_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-08   33.5   0.0    7.2e-08   32.4   0.0    1.5  1  PF13676.1  TIR domain
    0.00088   18.6   0.0     0.0014   17.9   0.0    1.3  1  PF01582.15 TIR domain


Domain annotation for each model (and alignments):
>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0     1e-11   7.2e-08      14      88 ..     119     198 ..     116     213 .. 0.82

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 1e-11
   PF13676.1  14 ealaeaLeragirvfldrdiapgedw...aeeiekalrradvvlvllspaylasdwvrkEleaake.lgk.pvipvlled 88 
                 +a+ ++Le++gi++f   ++++g+dw     +++ +  +a+v++v+++pa+++s  + +E+ +a   +++ +++pvl+e+
  MMETSP1325-20131115|2946_1 119 QAICNELEARGINTFSGLHVPAGTDWqvfLLKLNSRFSEAKVLIVIVTPAMYRSIPCLTEIFTALTnKRRvTLLPVLFEN 198
                 678899*********998********444467888889**************************44233459*****997 PP

>> PF01582.15  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   2.1e-07    0.0014      16      95 ..     119     196 ..     117     227 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 2.1e-07
                 THHHHHHHTSSS---EEEHHHHS-----HHHH....HHHHHTTEEEEEEEESHHHHHHTHHHHHTTTCCCT--------EEEEE CS
  PF01582.15  16 shllkeleekkpgiklfiderDllpgesiaen....ifeaIkkSrraivilssnyaesewcldElveavkealeqgnkkvilii 95 
                 +++  ele +  gi++f   + + +g +++++    ++++  + +++ivi+++ +++s  cl E   a++++ +    ++ +  
  MMETSP1325-20131115|2946_1 119 QAICNELEAR--GINTFSGLH-VPAG-TDWQVfllkLNSRFSEAKVLIVIVTPAMYRSIPCLTEIFTALTNKRRVT--LLPVLF 196
                 5788999999..********9.7777.888888988*****************************99999987733..444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1377.91
//
Query:       MMETSP1325-20131115|2950_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 397.69
//
Query:       MMETSP1325-20131115|2951_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 586.86
//
Query:       MMETSP1325-20131115|2953_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-31  108.9   0.0    1.3e-31  108.6   0.0    1.1  1  PF03912.9 Psb28 protein


Domain annotation for each model (and alignments):
>> PF03912.9  Psb28 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.6   0.0   9.3e-36   1.3e-31       8     108 .]      36     138 ..      29     138 .. 0.94

  Alignments for each domain:
  == domain 1    score: 108.6 bits;  conditional E-value: 9.3e-36
                 ------EEEE----------EEEEEES-GGGTSS-G..G..G----EEE-----EE---EE-EE----EEEEEEEE---SSHHHHHHHHHHHH---------- CS
   PF03912.9   8 dEevvpevrltrsrdgskgtalftfekpkalekess..ekkeitglyliDeEGelstrevkakfvngklkaveatyelkseeeweRfmRFmerYaeanglgys 108
                  E vvp+v++tr rdg++g a f f+ p+ ++       ++ it+++++DeEGe+s+++v+a+f+ngk+ ++ a+y++ks ee++Rf+RFm+r+a+a +lg++
  MMETSP1325-20131115|2953_1  36 LEPVVPDVKITRARDGTNGVAYFDFDMPSFFDPAYGepPQEAITAMRMQDEEGEISSTDVSARFMNGKPVGIDAQYIMKSAEEFDRFIRFMDRFAAAAELGFT 138
                 599*****************************9876567899**********************************************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 692.28
//
Query:       MMETSP1325-20131115|2952_1  [L=308]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.64
# Mc/sec: 1153.25
//
Query:       MMETSP1325-20131115|2947_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-21   74.7   0.0    1.1e-20   74.1   0.0    1.3  1  PF00828.14 Ribosomal protein L18e/L15


Domain annotation for each model (and alignments):
>> PF00828.14  Ribosomal protein L18e/L15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.0   8.2e-25   1.1e-20      11     129 .]      11     125 ..       2     125 .. 0.87

  Alignments for each domain:
  == domain 1    score: 74.1 bits;  conditional E-value: 8.2e-25
                 HH---S-----STT-T......STSSSCHHH...-----GG...HSGGGGCEEEEHHHHHHCTTTCTTSB---TTTCEEEHHHTSSEEEEE------S-.-EEEESEE-HHHHHHHCC----EEEH CS
  PF00828.14  11 nkggrgraGvhkhkriflgklvklyrrlgkr...gfnrpkl...rksrrnvapvnlgkLdelikklksgkleeegktvvvlgevtgyvKvlGsGkltkp.ltVkalkfSkkArekIeaaGGevvll 129
                 + g+++r   + +++++l++lvkly +l++r   +f +++     +s+ n +p++++k++++++   +++   +gkt+v +g+vt++ ++      + p l V+al+f++ Ar++I +aGGe++++
  MMETSP1325-20131115|2947_1  11 RVGHKTR-TAPVSDNVYLKLLVKLYSFLARRtesKFCKTICkrlYMSKVNKPPISVSKVARYMQ--PQEG---KGKTAVIVGTVTDDIRLT-----ELPaLRVCALRFTEGARARIVKAGGECLTF 125
                 3344444.5589*******************999999988788899***************665..5555...89****************.....99*************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.59
# Mc/sec: 783.89
//
Query:       MMETSP1325-20131115|2956_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.8e-43  146.4   0.0    1.3e-42  145.8   0.0    1.3  1  PF09139.6 Mitochondrial matrix Mmp37


Domain annotation for each model (and alignments):
>> PF09139.6  Mitochondrial matrix Mmp37
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.8   0.0   9.6e-47   1.3e-42     127     320 ..       2     194 ..       1     195 [] 0.87

  Alignments for each domain:
  == domain 1    score: 145.8 bits;  conditional E-value: 9.6e-47
   PF09139.6 127 RLqKPv.kvlksddekiklanqlNlksAlrvallllpekfteeeLyktiaglSYlGDlRmklvgenpkKvknIVeknlenfrelYkpllee...........leevnlkskka.........eakaekkkvkleqdkdpekrlnllrsLPkelrsklykeveeklkkreaeevlkeiasdeelkkeveklikkivskssltqtvkgvltaGisks 320
                 RL+KPv      +  +++ a+++Nl  A+r++llllpe+f+ ++Ly tiaglSY+GD+Rm  +genp+Kv+nIVe+nl++f+elY+p+lee                     +         e  +  ++++++qd++p++r +l+ +LP++lr+ l + +++ +            a+  e+++e++++++ iv +s+ +q++kg++taG++ks
  MMETSP1325-20131115|2956_1   2 RLHKPVlASSGAAAAEVREAHRANLLGAVRTSLLLLPEQFSRYDLYMTIAGLSYAGDFRM-QFGENPDKVRNIVEPNLSHFEELYAPVLEEleplcawgphpG---------EgdsegvsgaEFAQLAAAARCQQDMSPSARESLAGALPSTLRRGLSIATRAGT------------ATATEASDEIQTVLSGIVARSAKSQSLKGIVTAGVTKS 194
                 9*****544445699*********************************************.66****************************555555544331.........1344444554667778899***********************99988777666............77788999*****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.71
# Mc/sec: 658.15
//
Query:       MMETSP1325-20131115|2958_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|2957_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        4.6    7.8   6.9         22    5.6   4.8    1.9  1  PF09676.5  Type IV conjugative transfer system lipoprotein (TraV)
        5.9    6.0  10.0        6.8    5.8   6.9    1.1  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF09676.5  Type IV conjugative transfer system lipoprotein (TraV)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   4.8    0.0032        22      12      49 ..       6      61 ..       3     138 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0032
   PF09676.5 12 dtCatmeqanekakakeekseeakpaaaglprlaegn..................s 49
                ++C+tm++ +++  +++ ++ e+ +++ + ++ ++g+                  +
  MMETSP1325-20131115|2957_1  6 IDCRTMDKLYARHLKQKLSTAENPQTEMENEENQDGPnltgqtdqapgtgseprlP 61
                67********9998888777655555544444444447766555443333333221 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   6.9   0.00099       6.8     222     297 ..      24     103 ..      10     139 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.00099
                 XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX................................................. CS
  PF04652.11 222 dadeasaspseapssspgvpsfp.spdeseasnkdsqlPsaPty............aqknssssqsvfPpsseeeetssss..ppsteaps 297
                    e+++++ e+++++ g+ ++  + d++++  +++ lPs+P+             a          +  +s +++t+ss+  p+s+++++
  MMETSP1325-20131115|2957_1  24 STAENPQTEMENEENQDGP-NLTgQTDQAPGTGSEPRLPSPPDTalgavgrpraksA----------PAINSSSTTTNSSNghPRSNSKSP 103
                 4455555555555555554.4434888888888899999999777644443333321..........222222222222222111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       385  (0.0281597); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.65
# Mc/sec: 516.14
//
Query:       MMETSP1325-20131115|2960_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.69
# Mc/sec: 201.43
//
Query:       MMETSP1325-20131115|2961_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|2964_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 434.89
//
Query:       MMETSP1325-20131115|2965_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 445.04
//
Query:       MMETSP1325-20131115|2963_1  [L=536]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       563  (0.0411791); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.89u 0.33s 00:00:01.22 Elapsed: 00:00:00.46
# Mc/sec: 2792.28
//
Query:       MMETSP1325-20131115|2967_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 445.04
//
Query:       MMETSP1325-20131115|2969_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.6e-05   22.2   0.0    7.7e-05   22.0   0.0    1.1  1  PF05990.7 Alpha/beta hydrolase of unknown function (DUF900)


Domain annotation for each model (and alignments):
>> PF05990.7  Alpha/beta hydrolase of unknown function (DUF900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   5.6e-09   7.7e-05      17      63 ..      36      84 ..      21      88 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 5.6e-09
   PF05990.7 17 aakeilvfvHGynnsFedavlraaqiaddlknqg..aivvfsWPsagkl 63
                +++e lvf+HG+n + +d+  +++q ++  +++   ++ vfs P++ ++
  MMETSP1325-20131115|2969_1 36 RQDEALVFIHGFNATISDGSCQLGQFIALGNFPPylKPFVFSYPAGTEV 84
                6899***************************99888*********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|2971_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   14.5   0.9      0.037   14.2   0.6    1.1  1  PF04880.8 NUDE protein, C-terminal conserved region
       0.66    9.2   6.0       0.85    8.9   4.2    1.1  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF04880.8  NUDE protein, C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.6   5.4e-06     0.037      47     104 ..      33      86 ..      25     124 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 5.4e-06
   PF04880.8  47 livrerlrevnrksrpap..vqaslslPatpvtenslpspkslpngivaspltPsaklsl 104
                 ++++e  + v +++r a+  v +s+ + +t        ++++l n+ +a+ ltP a  ++
  MMETSP1325-20131115|2971_1  33 IAIQEVSHRVAQRRRHASasVSSSAASRSTS------HAAAALTNSAAANALTPVADTTA 86 
                 5788988889888888881233333333344......4589*************998776 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.2   0.00012      0.85      44      77 ..      26      66 ..       7      76 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00012
   PF10500.4 44 e.......srkkrekkkkkrrerssssssssssssssssss 77
                +       ++++ +++ ++rr+++s s sss++s s+s++ 
  MMETSP1325-20131115|2971_1 26 DghvpvriAIQEVSHRVAQRRRHASASVSSSAASRSTSHAA 66
                13333334788888999999999888888888777777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       635  (0.0464453); expected 273.4 (0.02)
Passed bias filter:                      389  (0.0284523); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 709.32
//
Query:       MMETSP1325-20131115|2972_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 713.91
//
Query:       MMETSP1325-20131115|2974_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-08   31.6   4.4    9.5e-08   31.2   3.1    1.1  1  PF02037.22 SAP domain
  ------ inclusion threshold ------
      0.031   13.7   0.2      0.049   13.1   0.1    1.4  1  PF12949.2  HeH/LEM domain
      0.077   13.1   0.9      0.083   13.0   0.6    1.1  1  PF11574.3  Protein of unknown function (DUF3235)
       0.12   12.0   0.4       0.13   11.9   0.3    1.0  1  PF11835.3  Domain of unknown function (DUF3355)
        1.3    7.4   4.6        1.2    7.5   3.2    1.1  1  PF04625.8  DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   3.1   3.5e-11   9.5e-08       2      27 ..      35      60 ..      34      60 .. 0.96

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 3.5e-11
                TT--HHHHHHHHHHTT------HHHH CS
  PF02037.22  2 skltVaeLKaeLkkrGLptsGkKaeL 27
                +kl+VaeLK+eL  rGL+t+G+K++L
  MMETSP1325-20131115|2974_1 35 DKLKVAELKKELTLRGLDTKGLKKDL 60
                79**********************98 PP

>> PF12949.2  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   1.8e-05     0.049       2      17 ..      35      50 ..      34      53 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.8e-05
   PF12949.2  2 ksLtVaqLRriLvehg 17
                ++L+Va+L++ L+  g
  MMETSP1325-20131115|2974_1 35 DKLKVAELKKELTLRG 50
                89**********9765 PP

>> PF11574.3  Protein of unknown function (DUF3235)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.6     3e-05     0.083      13      53 ..       3      46 ..       1      54 [. 0.68

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3e-05
   PF11574.3 13 akakpaPaaaA..pavqeyaadaslntnelavdklYdA.vkkrl 53
                ++++paP++aA   av e  a+a+++  +l vdkl  A +kk l
  MMETSP1325-20131115|2974_1  3 PAPAPAPVPAAqtTAVVESPAPAETEEAPLDVDKLKVAeLKKEL 46
                55666666666115689999999999999999998765355555 PP

>> PF11835.3  Domain of unknown function (DUF3355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   4.6e-05      0.13      35      79 ..       7      54 ..       2      60 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.6e-05
   PF11835.3 35 assaPsiaSaAavtpvslteTkeaeaDmdk...veeksektlqdlcak 79
                   +P +  +A v + +  eT+ea  D dk   +e k+e tl+ l +k
  MMETSP1325-20131115|2974_1  7 PAPVPAAQTTAVVESPAPAETEEAPLDVDKlkvAELKKELTLRGLDTK 54
                55689**********9********999998555578999999988776 PP

>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.2   0.00046       1.2     111     136 ..       2      27 ..       1      48 [. 0.62

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00046
   PF04625.8 111 apapaaaaapaaasapaadspaasvp 136
                 apapa+a++paa ++   +spa++  
  MMETSP1325-20131115|2974_1   2 APAPAPAPVPAAQTTAVVESPAPAET 27 
                 56666666666666666666655433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 281.11
//
Query:       MMETSP1325-20131115|2968_1  [L=439]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-14   52.6  51.2    7.8e-14   51.0  27.4    2.1  2  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0  27.4   5.7e-18   7.8e-14      34     316 ..      30     331 ..       2     355 .. 0.73
   2 !    7.0   3.0   0.00014       1.9     215     261 ..     358     401 ..     351     412 .. 0.78

  Alignments for each domain:
  == domain 1    score: 51.0 bits;  conditional E-value: 5.7e-18
  PF07690.11  34 igwlltlyslgyaiasllaGrlsdrfGrrrvlllglllfalglllll.fa....sslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslg.................WravFlilailsllaavlvllllprepperkrkspaeel.rkepaplvpawklllkppvlwillialllfffvfsglltllply..lqevlglsp....glllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalglallaftssavwlll..vlvliGf.glg 316
                   w++++ +l  ++a ++++r + r+G+ + + +g  + al+ ++l+ f+     +l a++ +  +l G+++ ++f++ + l+ +wfp+ ++g++ gl+ agf+ G++l  +lg+ +a  +g                 +++v   la+++ l+ +++ + l+rep+  + +s+     +  ++ +  +  +++++++l    ++l+++f+ f+g+++   +y  l +  g+ +    g +++g+l g++  ++    +++g l+d++g   +++++++l  la+  +a ++    +++++   + +l+G  +++
  MMETSP1325-20131115|2968_1  30 TTWVMSGIMLSNIAALPFLSRAIIRLGPIKSVAIGSQICALA-VFLSsFViqngGTLGAFFSLYACLFGVAMTMVFSTPLPLAWQWFPG-RKGLVSGLILAGFGSGSMLFNVLGSKFANPGGcapipgtgefpnevidrFPLVLRKLAVIYSLLSLVG-VSLMREPKLYPADSKYAAVrKNSERRAM-LGPSIRSRKFL----VLLAMVFLSFAGAYSVANIYrtLGQSAGILTtdaaG-MQLGVLAGFANGFS---KPVWGSLVDKYGVGGPWAFVCVLQCLALTVFATIGGGGLTSLSVPtrS-LLFGAaTVS 331
                 78****************************888888888888.55555855677889999*****************************.****************************8888*****************8888877777777776644.4555555555555555552222333333.36799999955....444444444444444444432248888888888766.77775555555555...*************************************55555555532.222221111 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.00014
  PF07690.11 215 alllfffvfsglltllplylqevlglspglllaglllgllaligaig 261
                 ++ + f++f++++++ pl ++ v++ls  l++++ + ++l+lig ++
  MMETSP1325-20131115|2968_1 358 VFSCLFVGFATASMMGPL-MMNVFDLS--LTQILRVAAILSLIGGVV 401
                 78888899999*******.5*******..777777777777777433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.32s 00:00:01.09 Elapsed: 00:00:00.52
# Mc/sec: 2023.08
//
Query:       MMETSP1325-20131115|2975_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 290.62
//
Query:       MMETSP1325-20131115|2966_1  [L=747]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (747 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.02u 0.36s 00:00:01.38 Elapsed: 00:00:00.59
# Mc/sec: 3034.03
//
Query:       MMETSP1325-20131115|2978_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 1203.39
//
Query:       MMETSP1325-20131115|2979_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00019   20.8   1.2       0.19   11.2   0.0    2.6  2  PF12799.2  Leucine Rich repeats (2 copies)
     0.0047   16.6   0.2        4.6    7.5   0.0    3.5  3  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.014   15.2   3.9        2.6    8.2   0.0    3.8  4  PF13516.1  Leucine Rich repeat
      0.026   14.5   0.9         11    6.6   0.0    3.5  4  PF13504.1  Leucine rich repeat
       0.13   11.9   0.7        1.7    8.3   0.0    2.5  2  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   7.1e-05      0.19       2      36 ..      41      75 ..      40      91 .. 0.87
   2 !    7.5   0.6     0.001       2.7       2      23 ..      94     119 ..      93     121 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 7.1e-05
   PF12799.2  2 nLevLdLsnNnIk..dlppelanLpnLktLnLsnNpi 36
                +L+ LdLs+++    ++++ +an+p Lk+Ln++++ +
  MMETSP1325-20131115|2979_1 41 KLKGLDLSDCQFMqgNIKA-FANMP-LKVLNMEGCGY 75
                8999******985358***.****9.*******9875 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.001
   PF12799.2   2 nLevLdLsnN....nIkdlppelanL 23 
                 + + L+L+++    nIkdlp ++  L
  MMETSP1325-20131115|2979_1  94 SVTNLNLAQTniegNIKDLPQSITDL 119
                 67899****94554567888887666 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0017       4.6       1      13 [.      41      53 ..      41      63 .. 0.68
   2 ?    3.0   0.0     0.051   1.4e+02       2      11 ..      65      74 ..      64      98 .. 0.75
   3 ?    2.6   0.1     0.069   1.9e+02       2      16 ..      95     113 ..      94     119 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0017
                TESEEEETSSBCB CS
  PF00560.28  1 nLeeLdLsgNnlt 13
                +L+ LdLs++++ 
  MMETSP1325-20131115|2979_1 41 KLKGLDLSDCQFM 53
                6899******553 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.051
                ESEEEETSSB CS
  PF00560.28  2 LeeLdLsgNn 11
                L++L++ g+ 
  MMETSP1325-20131115|2979_1 65 LKVLNMEGCG 74
                8999999995 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.069
                 ESEEEETSSBCB.C...HH CS
  PF00560.28   2 LeeLdLsgNnlt.s...lp 16 
                  + L+L  +n++ +   lp
  MMETSP1325-20131115|2979_1  95 VTNLNLAQTNIEgNikdLP 113
                 5789999999997755555 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00097       2.6       4      24 .]      42      62 ..      40      62 .. 0.85
   2 ?    0.2   0.0      0.38   1.1e+03       4      13 ..      65      74 ..      64      82 .. 0.82
   3 ?    4.8   0.2     0.012        33       2      16 ..      93     107 ..      92     114 .. 0.85
   4 ?   -0.5   0.0      0.64   1.7e+03       2       9 ..     114     121 ..     112     122 .] 0.86

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00097
   PF13516.1  4 LtsLdLsnNqigdeGlsaLan 24
                L+ LdLs++q+ +  ++a+an
  MMETSP1325-20131115|2979_1 42 LKGLDLSDCQFMQGNIKAFAN 62
                777*******99988998886 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.38
   PF13516.1  4 LtsLdLsnNq 13
                L++L++ +++
  MMETSP1325-20131115|2979_1 65 LKVLNMEGCG 74
                899**99886 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.012
   PF13516.1   2 knLtsLdLsnNqigd 16 
                 k+ t+L+L +++i +
  MMETSP1325-20131115|2979_1  93 KSVTNLNLAQTNIEG 107
                 5789********975 PP

  == domain 4    score: -0.5 bits;  conditional E-value: 0.64
   PF13516.1   2 knLtsLdL 9  
                 +++t+L+L
  MMETSP1325-20131115|2979_1 114 QSITDLNL 121
                 68999998 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.004        11       2      13 ..      41      52 ..      40      57 .. 0.85
   2 ?    1.4   0.0      0.21   5.8e+02       3      12 ..      65      74 ..      65      92 .. 0.82
   3 ?    2.9   0.0     0.066   1.8e+02       2      14 ..      94     106 ..      93     113 .. 0.66
   4 ?   -3.3   0.0         5   1.4e+04       4       7 ..     117     120 ..     114     121 .. 0.54

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.004
   PF13504.1  2 nLkeLdLsgnrL 13
                +Lk LdLs++++
  MMETSP1325-20131115|2979_1 41 KLKGLDLSDCQF 52
                6899******97 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.21
   PF13504.1  3 LkeLdLsgnr 12
                Lk+L+  g++
  MMETSP1325-20131115|2979_1 65 LKVLNMEGCG 74
                8999999995 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.066
   PF13504.1   2 nLkeLdLsgnrLt 14 
                 + ++L+L+ ++++
  MMETSP1325-20131115|2979_1  94 SVTNLNLAQTNIE 106
                 689****998754 PP

  == domain 4    score: -3.3 bits;  conditional E-value: 5
   PF13504.1   4 keLd 7  
                 ++L+
  MMETSP1325-20131115|2979_1 117 TDLN 120
                 5555 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00064       1.7      25      59 ..      40      73 ..      31      82 .. 0.72
   2 ?    1.7   0.1     0.074     2e+02      52      60 ..      96     104 ..      83     121 .. 0.56

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00064
   PF13855.1 25 snLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                ++Lk LdLs++     + +af+++  L+ Ln++g+
  MMETSP1325-20131115|2979_1 40 EKLKGLDLSDCQFMQGNIKAFANM-PLKVLNMEGC 73
                577777777777777777777777.5666666654 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.074
   PF13855.1  52 reLnLsgNr 60 
                 + LnL +++
  MMETSP1325-20131115|2979_1  96 TNLNLAQTN 104
                 233333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 664.44
//
Query:       MMETSP1325-20131115|2976_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|2980_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 953.65
//
Query:       MMETSP1325-20131115|2981_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-16   60.4   0.0    3.3e-16   59.4   0.0    1.6  1  PF01399.22 PCI domain
     0.0056   16.3   1.0     0.0095   15.5   0.1    1.8  2  PF10075.4  COP9 signalosome, subunit CSN8


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   4.8e-20   3.3e-16       5     104 ..     126     226 ..     122     227 .. 0.93

  Alignments for each domain:
  == domain 1    score: 59.4 bits;  conditional E-value: 4.8e-20
                 XXXXXXXXXX.XXXXXXXXXXX.....XXXXXXX------HHHHHHHHHHHHHS-SEE-TTT----SSS-HHHHHHHHHHHHH-------B-S----EE-- CS
  PF01399.22   5 dllkalrsgn.lsgfseelkdleeelladdglsqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIadgelrakidqpsgivvfk 104
                  +l++l+ +  ++g++e l +++  l  d +l    +++ +++r+  ++++++i+++i++++la++l + ++++E+++v+lI+  +l+akid+++g+v+++
  MMETSP1325-20131115|2981_1 126 KFLECLYVNFdFEGAQEKLHECKLVLQSDYFLCNSTDEFMENARLFIFETYCRIHQKIDISMLAQKLAMESEDAERWIVNLIRGAYLDAKIDSNHGTVIMG 226
                 56777666655***********999999999********************************************************************97 PP

>> PF10075.4  COP9 signalosome, subunit CSN8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.38   2.6e+03      22      57 ..      84     119 ..      72     121 .. 0.70
   2 !   15.5   0.1   1.4e-06    0.0095      71     120 ..     156     205 ..     128     216 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.38
   PF10075.4  22 dfrlllkrlpaaikesdeeiqkllsLeqlLeendya 57 
                 ++ +ll+ l aa++ +++  + l sL + +++ +y+
  MMETSP1325-20131115|2981_1  84 NAPWLLRYLTAAVIINKRRRSELKSLVRVIQQEQYN 119
                 556666666666666666666777777777777775 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 1.4e-06
   PF10075.4  71 dltafvagleelvRkeiaelvgkaYesIsadvlaelLglsdeelekfvve 120
                 +l +  ++++e++R +i+e   + +++I +  la+ L +++e++e ++v+
  MMETSP1325-20131115|2981_1 156 FLCNSTDEFMENARLFIFETYCRIHQKIDISMLAQKLAMESEDAERWIVN 205
                 6788899****************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       564  (0.0412522); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1313.00
//
Query:       MMETSP1325-20131115|2982_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|2986_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       964  (0.0705091); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 587.34
//
Query:       MMETSP1325-20131115|2970_1  [L=501]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0039   16.8   0.0      0.012   15.3   0.0    1.9  1  PF00011.16 Hsp20/alpha crystallin family


Domain annotation for each model (and alignments):
>> PF00011.16  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0     9e-07     0.012       2     100 ..     194     294 ..     193     298 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 9e-07
  PF00011.16   2 ikeekdkfevkldvpglkkeelkvkvednk.vlvkgehe.....eeeeddkglrserssrkFkrkfkLPenvdkd.kvkasl.kdGvLtvtvpkkkpekkkkerkiq 100
                 ++e ++++e+++++pg+ ++ ++ +v      + +   +      e++   g +   ++  + r  +L  +vd++ + +as+  dG+L v++pk+++ ++    +++
  MMETSP1325-20131115|2970_1 194 VRELEERYELEVELPGVIEDTIELSVVPASrHSLNTRTRvlsltAERSPAAGGH---KRPPYARAWELAADVDDSgSFDASYsGDGLLIVSAPKLPAVEP---ATVP 294
                 678899**************9998886544233333333565544444444444...4899***********986379****************999854...4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       906  (0.0662668); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.93u 0.34s 00:00:01.27 Elapsed: 00:00:00.61
# Mc/sec: 1968.16
//
Query:       MMETSP1325-20131115|2987_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 881.86
//
Query:       MMETSP1325-20131115|2988_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 506.92
//
Query:       MMETSP1325-20131115|2990_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 541.79
//
Query:       MMETSP1325-20131115|2983_1  [L=411]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-11   44.4   0.0    1.6e-11   44.0   0.0    1.2  1  PF00307.26 Calponin homology (CH) domain
     0.0013   18.6   0.0     0.0021   18.0   0.0    1.3  1  PF06395.6  CDC24 Calponin


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   2.4e-15   1.6e-11       1     106 [.     286     385 ..     286     388 .. 0.87

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 2.4e-15
                 HHHHHHHHHHHHTTSTCTSSHSHHHHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS..-HHHHHTST-HHHHHHHHHHHHH CS
  PF00307.26   1 edallrWinkvlekleqsrqvenlskdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvl..tledllysgnkknvlaflaeLfr 106
                 e ++++W++++++    ++  ++l   l+DG +L+al ++++ ++v  + i  + + +++++ eN+ ++l++a++ +gv+     ++ dl++++++  v+++l +L r
  MMETSP1325-20131115|2983_1 286 ESEVVNWVQSKTGS---QKGGQSLAAWLKDGKVLCALANSLQAGVV--SRI--EQSSAPFKQRENVANFLQAARK-IGVRDGDcfETADLFDEKDMGGVIQCLDALKR 385
                 57899****99975...57899**********************75..666..333379************7777.****98888*****************998876 PP

>> PF06395.6  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.1e-07    0.0021       5      82 ..     305     380 ..     303     386 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 3.1e-07
   PF06395.6   5 slwkllrqGspLlvlfNalkpeeklevdevssddakkcKksvykFleackkeLgfedeelftisdlfsd.dttglvkvl 82 
                 sl   l+ G  L++l N l++    ++  ++s+   k +++v +Fl+a  +++g++d ++f  +dlf + d  g ++ l
  MMETSP1325-20131115|2983_1 305 SLAAWLKDGKVLCALANSLQAGVVSRI--EQSSAPFKQRENVANFLQAA-RKIGVRDGDCFETADLFDEkDMGGVIQCL 380
                 677889*********************..77777788899******987.579**************872444555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.37s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 1894.04
//
Query:       MMETSP1325-20131115|2991_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 863.59
//
Query:       MMETSP1325-20131115|2992_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.22   10.9   1.7       0.24   10.8   1.2    1.0  1  PF12026.3  Domain of unknown function (DUF3513)
       0.34    9.5   9.1       0.34    9.5   6.3    1.0  1  PF07946.9  Protein of unknown function (DUF1682)


Domain annotation for each model (and alignments):
>> PF12026.3  Domain of unknown function (DUF3513)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.2   3.4e-05      0.24      14      61 ..      16      66 ..       8      72 .] 0.72

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 3.4e-05
   PF12026.3 14 wmedydyvhlqgkeeferqqkellekeniekqk...qkkqferleqeveks 61
                ++ed + v+ q+ e++er+++e le+++  +++   + +++ r+ +e+ ++
  MMETSP1325-20131115|2992_1 16 TCEDCETVKRQRLEKIERERQEWLEQQRRAQEAarrEYEEKARIVREKREA 66
                79********************99988666443344444444555555444 PP

>> PF07946.9  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   6.3     5e-05      0.34     252     300 ..      23      69 ..       8      72 .] 0.81

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 5e-05
   PF07946.9 252 lreevlkkvkklReevekkllkakeeerqEeaqekkeekkkeereakla 300
                 ++++ l+k+++ R+e  ++ ++a+e++r+E   e+k++  +e+rea+ a
  MMETSP1325-20131115|2992_1  23 VKRQRLEKIERERQEWLEQQRRAQEAARRE--YEEKARIVREKREAEAA 69 
                 678899************************..56777777777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1543  (0.112858); expected 273.4 (0.02)
Passed bias filter:                      923  (0.0675102); expected 273.4 (0.02)
Passed Vit filter:                       127  (0.00928906); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.45s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|2993_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   14.6   0.0      0.031   14.5   0.0    1.1  1  PF12467.3 Cucumber mosaic virus 1a protein


Domain annotation for each model (and alignments):
>> PF12467.3  Cucumber mosaic virus 1a protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   2.3e-06     0.031      13     100 ..      10      91 ..       2     103 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 2.3e-06
   PF12467.3  13 lrevlktlFPtLrsyrdekeFlvKlstveeFNeedsvdiseerdvvaeaadvlkraavevedaktlraekkkkleeaaeqpvqedsve 100
                 + +v +t+ Pt++       F   lstv+ F    + +i +  dv+  a +v    +++ ++ k+  + +k+   + + +pv+ + +e
  MMETSP1325-20131115|2993_1  10 VVCVEATHAPTMK--FTAAVFALVLSTVVAFTPASMRPITRGVDVICMAKHV----NHKAAKNKEVNRPRKHRPSDINRKPVTYELTE 91 
                 6677788889988..556789999***********************99998....55555666666666666666666677766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       610  (0.0446167); expected 273.4 (0.02)
Passed bias filter:                      521  (0.0381071); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.48s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 508.61
//
Query:       MMETSP1325-20131115|2994_1  [L=281]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-21   75.6   0.6    1.9e-12   46.8   0.0    3.1  3  PF10294.4  Putative methyltransferase
    0.00059   20.2   0.4     0.0037   17.7   0.3    2.5  1  PF12847.2  Methyltransferase domain
     0.0016   18.0   0.0     0.0043   16.6   0.0    1.6  1  PF13489.1  Methyltransferase domain
  ------ inclusion threshold ------
      0.027   14.0   0.1      0.043   13.4   0.1    1.3  1  PF04360.7  Serglycin
      0.079   11.8   0.0       0.12   11.3   0.0    1.2  1  PF00398.15 Ribosomal RNA adenine dimethylase
      0.093   12.6   1.3       0.48   10.3   0.2    2.7  2  PF13659.1  Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF10294.4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   8.4e-16   1.9e-12      12      92 ..       6      92 ..       2     101 .. 0.89
   2 ?    2.9   0.0     0.026        58     102     129 ..     129     156 ..     122     174 .. 0.85
   3 !   22.7   0.0   2.2e-08     5e-05     124     162 ..     182     220 ..     172     230 .. 0.89

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 8.4e-16
   PF10294.4 12 dtgnsvgrvvWdaavvlskylekklake........lgsnelsglsvlELGsGtGlvGiavalllpeakviltDleellellkknieln 92
                + + +vg+ +W +a+++++yle++   +        + s++l+gl+vlELG+G G v  ++  l  +a+v+ tD  ++l+ll+ niel 
  MMETSP1325-20131115|2994_1  6 QVSGEVGADIWASAIAMAEYLEQNYGVRadasaggeQTSTALEGLRVLELGAGIGFVSQVLWDL--GADVVATDKANMLPLLQANIELH 92
                66779******************875558899999888899********************999..9********************94 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.026
   PF10294.4 102 akvLdWgeelkedvlekeevDlilaaDc 129
                 a ++dW +  ++++l+++++D++  +D+
  MMETSP1325-20131115|2994_1 129 AVEFDWSQTPPDELLNRRPYDMVRSVDI 156
                 55789******************99887 PP

  == domain 3    score: 22.7 bits;  conditional E-value: 2.2e-08
   PF10294.4 124 ilaaDcvYledslelLvktLkdlleketkilvaykkrre 162
                 i+ aDc+Y ++s+e+L+++L  l+++ t++l++ + r  
  MMETSP1325-20131115|2994_1 182 IICADCIYAQSSVEPLLQSLMALCTEGTQVLLSNELRTP 220
                 899*****************************9998865 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.3   1.6e-06    0.0037       2      46 ..      49     100 ..      48     215 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.6e-06
   PF12847.2   2 gkrilDlGcGtGslslelarlrpgakvvgvDpseeslelarena..........k 46 
                 g r+l+lG+G G +s +l +   ga+vv+ D+ +++l l+++n+          +
  MMETSP1325-20131115|2994_1  49 GLRVLELGAGIGFVSQVLWD--LGADVVATDK-ANMLPLLQANIelhrgaadasE 100
                 679*****************..9********8.7899999999855555444440 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.9e-06    0.0043      22     121 ..      48     220 ..      33     243 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.9e-06
   PF13489.1  22 pggrvLDiGcGtGillellaengfdvtgvDpspaaigk..........................................akqaqksqfdeedaaepag..................................................kfdlivarevlehvpdpeellrqiaellkpgGylllstpnasl 121
                 +g rvL++G+G G ++++l + g+dv++ D   ++ +                                                                                                                +f  i++ ++++   ++e ll+++ +l+ +g  +lls  ++++
  MMETSP1325-20131115|2994_1  48 EGLRVLELGAGIGFVSQVLWDLGADVVATDKA-NMLPLlqanielhrgaadasepagvsgeggsgggsggdegagsghhgL-----------------VavefdwsqtppdellnrrpydmvrsvdiglfvpseapplnsarntaqlptPFQ-IICADCIYAQSSVEPLLQSLMALCTEGTQVLLSNELRTP 220
                 677****************************4.445555776666666655555555555555555555555555554441.................044444444444445555666666666777777777777777778888885666.55679999999999*************999999887753 PP

>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   1.9e-05     0.043      91     125 ..      89     141 ..      55     162 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.9e-05
   PF04360.7  91 y..................sgsgsgsGsGsGsgsGsGflaeleqeyqpvdend 125
                 +                   gsg gsG   G+gsG   l  +e+++  +  ++
  MMETSP1325-20131115|2994_1  89 IelhrgaadasepagvsgeGGSGGGSGGDEGAGSGHHGLVAVEFDWSQTPPDE 141
                 14444444444444554445889999999999999999999999887665444 PP

>> PF00398.15  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   5.1e-05      0.12      29      73 ..      47      90 ..      26      95 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 5.1e-05
  PF00398.15 29 qekdtvlEigpGkGalTeeLakrakqvvalEidsklvkrlqkkla 73
                 e + vlE+g+G G++++ L ++   vva ++  +++ +lq++++
  MMETSP1325-20131115|2994_1 47 LEGLRVLELGAGIGFVSQVLWDLGADVVATDK-ANMLPLLQANIE 90
                48899***********************9987.456667776655 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.1   2.6e+03      27      48 ..      11      32 ..      10      44 .. 0.77
   2 ?   10.3   0.2   0.00021      0.48       1      49 [.      49     133 ..      49     244 .. 0.61

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.1
   PF13659.1 27 lgvEldpraaalaarnlaragl 48
                +g+++ + a+a+a++  +++g+
  MMETSP1325-20131115|2994_1 11 VGADIWASAIAMAEYLEQNYGV 32
                5889999999999988887776 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00021
   PF13659.1   1 gdrvldpgcGsGtfllaalellaalllgvEl.dpraaalaarnlaragl....................................a 49 
                 g+rvl++g+G G +  ++ +l+ a++++++  +   +  a+ +l+r ++                                    +
  MMETSP1325-20131115|2994_1  49 GLRVLELGAGIGFVSQVLWDLG-ADVVATDKaNMLPLLQANIELHRGAAdasepagvsgeggsgggsggdegagsghhglvavefD 133
                 68*******************9.999999964444444444444442224555555566666666666666666554444433330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.47s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1320.35
//
Query:       MMETSP1325-20131115|2995_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       470  (0.0343768); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.44s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 576.05
//
Query:       MMETSP1325-20131115|2997_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   10.0   4.0       0.18   10.1   2.8    1.0  1  PF04632.7  Fusaric acid resistance protein family
       0.18   11.3  10.7       0.22   11.0   7.4    1.0  1  PF10721.4  Protein of unknown function (DUF2514)
       0.24   10.5   8.8       0.27   10.3   6.1    1.0  1  PF11932.3  Protein of unknown function (DUF3450)
        0.3   10.5  15.0       0.34   10.3  10.4    1.1  1  PF00769.14 Ezrin/radixin/moesin family
       0.41    9.3   5.2       0.41    9.3   3.6    1.0  1  PF02181.18 Formin Homology 2 Domain
       0.54    9.9  14.5        1.6    8.4  10.1    1.7  1  PF00430.13 ATP synthase B/B' CF(0)
       0.61    9.5  10.9       0.85    9.0   7.6    1.3  1  PF04156.9  IncA protein
       0.65    9.9  10.0       0.71    9.8   7.0    1.1  1  PF09304.5  Cortexillin I, coiled coil
       0.74    7.8  11.4       0.86    7.6   7.9    1.0  1  PF05262.6  Borrelia P83/100 protein
       0.98    8.8  12.0        1.2    8.5   8.3    1.3  1  PF01025.14 GrpE
        1.3    8.5   7.0        1.5    8.2   4.9    1.1  1  PF04420.9  CHD5-like protein
        1.4    8.6  11.9       0.21   11.3   1.5    2.1  2  PF06428.6  GDP/GTP exchange factor Sec2p
        1.5    8.2   4.8        0.5    9.8   1.4    1.5  2  PF09776.4  Mitochondrial ribosomal protein L55
        2.1    7.8  11.4        2.3    7.7   7.9    1.1  1  PF03962.10 Mnd1 family
        2.3    6.9   9.1        2.6    6.7   6.3    1.1  1  PF14362.1  Domain of unknown function (DUF4407)
        2.4    8.2   8.1        2.7    8.0   5.6    1.1  1  PF11871.3  Domain of unknown function (DUF3391)
        3.9    6.4  14.3          4    6.4   9.9    1.0  1  PF02841.9  Guanylate-binding protein, C-terminal domain
        4.4    6.8   7.0        7.8    6.1   4.6    1.5  1  PF08286.6  Spc24 subunit of Ndc80
          5    6.5  11.1        6.1    6.2   0.5    2.0  2  PF04977.10 Septum formation initiator
        5.5    6.9   9.5          6    6.7   6.6    1.1  1  PF11068.3  Protein of unknown function (DUF2869)
        6.7    6.4  12.4        0.6    9.8   1.6    2.0  2  PF11559.3  Afadin- and alpha -actinin-Binding
        7.4    4.7   7.4        7.6    4.7   5.1    1.0  1  PF03961.8  Protein of unknown function (DUF342)


Domain annotation for each model (and alignments):
>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.8   0.00028      0.18     597     646 ..       4      55 ..       1      71 [. 0.63

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00028
   PF04632.7 597 arkerrlaapaalldaldaalaalaadpaaaa..lrralaaLvdlrlalldd 646
                 +++e+++++ +++ d+l+aa++++ +++a++a  ++r+ + L  +r++++d 
  MMETSP1325-20131115|2997_1   4 REREQAEREKQDAQDELAAAQEQVVSAEAQQAryRKRMERKLAETRSEIEDL 55 
                 4456666666667777777777777666666666666666666666666554 PP

>> PF10721.4  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   7.4   0.00036      0.22      57     110 ..       4      57 ..       2      66 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00036
   PF10721.4  57 qrRqaaaeeaakdAqeeaaaaradAadAeaaadrLrqeadkl.aaaksavtsdta 110
                 ++R+ +ae +++dAq e+aaa+++ + Aea+  r r+++++  a ++s  +  ta
  MMETSP1325-20131115|2997_1   4 RERE-QAEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKlAETRSEIEDLTA 57 
                 4444.4556899*************************997543777765555444 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   6.1   0.00044      0.27      44     100 ..       9      65 ..       2      70 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00044
   PF11932.3  44 kidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieet 100
                    + +d+++el a  eq+    ++ + y++++e+ +++ ++e+++l+ + ++ +e+
  MMETSP1325-20131115|2997_1   9 AEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSEIEDLTADFDKEKEM 65 
                 3334455666666666666666677777*********************99987776 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3  10.4   0.00054      0.34      43     102 ..       4      63 ..       1      71 [. 0.82

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00054
  PF00769.14  43 kqeeeeaqklekkakeleeekerLeeeaaksekekeeLekevdeaeaevakleeerekke 102
                 ++ e+++ + + +++el++++e++ +++a++++ ++++e +++e   e++ l+   +k +
  MMETSP1325-20131115|2997_1   4 REREQAEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSEIEDLTADFDKEK 63 
                 3444455555678899************************************99888765 PP

>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.6   0.00066      0.41     285     340 ..       7      66 ..       1      71 [. 0.74

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00066
                 HHHHHHHHHHHHHHHCHHT....TSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02181.18 285 kklekglkklekeleksee....keeesdkfvekleefleeaeeklkkleeelkeakelf 340
                 ++ e++ +++++el++ +e    +e ++ + ++ +e+ l e++ +++ l +++++ ke++
  MMETSP1325-20131115|2997_1   7 EQAEREKQDAQDELAAAQEqvvsAEAQQARYRKRMERKLAETRSEIEDLTADFDKEKEML 66 
                 44555555555555555555555556***************************9988776 PP

>> PF00430.13  ATP synthase B/B' CF(0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  10.1    0.0026       1.6      40      87 ..       7      54 ..       2      72 .] 0.83

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0026
  PF00430.13 40 keaeerlkeaaellaeaeqqleqArkeaseiienakkeaqklkeeila 87
                ++ae+ +++a+  la+a++q+ +A+++ ++++++++++ ++ ++ei++
  MMETSP1325-20131115|2997_1  7 EQAEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSEIED 54
                799999999999999999999999999999999999999999999875 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   7.6    0.0014      0.85      65     125 ..       5      66 ..       1      72 [] 0.74

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0014
   PF04156.9  65 pvqseedekieesrlqeelsesesqlsele....eeleqleerlaeleseledleedlellqeel 125
                 ++ + e+ek+++   q el+++++q+  +e    ++  ++e++lae+ se+edl  d+++++e+l
  MMETSP1325-20131115|2997_1   5 EREQAEREKQDA---QDELAAAQEQVVSAEaqqaRYRKRMERKLAETRSEIEDLTADFDKEKEML 66 
                 444555666655...88888888888776664557777799999999999999999999999776 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   7.0    0.0011      0.71      25      82 ..       9      67 ..       1      72 [] 0.80

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0011
   PF09304.5 25 ledekv.sqeeLakqkdeLksllasleaqkaerekrlrelqakidellknlekeklakl 82
                 e ek  +q+eLa  ++++ s  a     ++  e++l+e +++i++l  +++kek+  +
  MMETSP1325-20131115|2997_1  9 AEREKQdAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSEIEDLTADFDKEKEMLM 67
                455554379999999999888877777778889999*******************9766 PP

>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.9    0.0014      0.86     281     342 ..       4      64 ..       2      71 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0014
   PF05262.6 281 reiekaqkeikkkdeeakkakdakaedlkkeskaeekeaedkeleakkereevaeDlqkike 342
                 re e+a +e + +++e+  a+++     ++ ++ ++++ e k +e++ e e+++ D  k ke
  MMETSP1325-20131115|2997_1   4 REREQAEREKQDAQDELAAAQEQVVSAEAQQARYRKRM-ERKLAETRSEIEDLTADFDKEKE 64 
                 78888888999999999999*99988889999999888.*****************999876 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   8.3    0.0019       1.2      12      63 ..       4      54 ..       1      71 [. 0.73

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0019
  PF01025.14 12 deeeeleeeleeleeevkelkdkllrllaefenlrkrtekekeeakkyaiek 63
                 e e+ e e +++++e++++++++  ++a+   +rkr+e++++e+++ +ie+
  MMETSP1325-20131115|2997_1  4 REREQAEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRS-EIED 54
                55666666667778888888888888888888888888888888774.3444 PP

>> PF04420.9  CHD5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.9    0.0025       1.5      42      96 ..      10      66 ..       2      72 .] 0.71

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0025
                HHHHHHHHHHH.HHHHTTS-TTTTHHHHHH.HHHHHHHHHHHHHHHHHHHHHTTHHH CS
   PF04420.9 42 qkklkkellel.keelnsiSaqDeyAkWak.lnRkldklekeleklkkelkaqkekf 96
                ++++++   el  ++++ +Sa  + A++ k ++Rkl  + +e+e+l ++ +++ke  
  MMETSP1325-20131115|2997_1 10 EREKQDAQDELaAAQEQVVSAEAQQARYRKrMERKLAETRSEIEDLTADFDKEKEML 66
                3333333333313456789*********7548*****************99999866 PP

>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   2.7      0.19   1.2e+02      44      74 ..       4      27 ..       1      35 [. 0.47
   2 ?   11.3   1.5   0.00033      0.21       4      41 ..      32      68 ..      29      72 .] 0.78

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.19
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF06428.6 44 kekeaveeknekleeqLkekelllevlqaql 74
                +e+e++e+ ++       +++ +l++ q+q+
  MMETSP1325-20131115|2997_1  4 REREQAEREKQ-------DAQDELAAAQEQV 27
                34444444444.......4444444444444 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00033
                HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF06428.6  4 aeekkkreeaekekkkleqEveeLTasLFeEAnkmVan 41
                a++ + r+++e + ++   E+e+LTa  F+  ++m  n
  MMETSP1325-20131115|2997_1 32 AQQARYRKRMERKLAETRSEIEDLTAD-FDKEKEMLMN 68
                4566778999999999999*****998.7777777655 PP

>> PF09776.4  Mitochondrial ribosomal protein L55
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       2.3   1.5e+03      91     101 ..       8      20 ..       2      26 .. 0.45
   2 ?    9.8   1.4    0.0008       0.5      77     109 ..      28      63 ..      21      68 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 2.3
   PF09776.4  91 p..kekleleeev 101
                    +ek   ++e+
  MMETSP1325-20131115|2997_1   8 QaeREKQDAQDEL 20 
                 2123444444443 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0008
   PF09776.4  77 lseeerrarlekRkpkekleleeeveD...tfdeek 109
                 +s e ++ar +kR  ++  e++ e+eD   +fd+ek
  MMETSP1325-20131115|2997_1  28 VSAEAQQARYRKRMERKLAETRSEIEDltaDFDKEK 63 
                 78999**********999999999998666788877 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   7.9    0.0037       2.3      67     131 ..       2      64 ..       1      72 [] 0.85

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0037
  PF03962.10  67 lkteleklkkeleelkqrikelqaeiekekkkreeteereelleelkeleeelkklkkeleklak 131
                 l++e e++++e ++++ +++ +q+++ ++++++     r+++ ++l+e ++e+++l +++ k ++
  MMETSP1325-20131115|2997_1   2 LEREREQAEREKQDAQDELAAAQEQVVSAEAQQARY--RKRMERKLAETRSEIEDLTADFDKEKE 64 
                 578899999999999999999999999998887777..999999999999999999999987665 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.3    0.0042       2.6     116     165 ..      10      59 ..       2      69 .. 0.41

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0042
   PF14362.1 116 ekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeev 165
                 e++++++++  a+ +++ ++++a++   +++++++l+e ++e++++++  
  MMETSP1325-20131115|2997_1  10 EREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSEIEDLTADF 59 
                 22222222222222223444444444444444444444444444444444 PP

>> PF11871.3  Domain of unknown function (DUF3391)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.6    0.0044       2.7      61     127 ..       7      71 ..       1      72 [] 0.64

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0044
   PF11871.3  61 depeekeeeedsikqlrekakpsskakvsverelkrakklyqeakrlvrklfedaragkaidvepae 127
                 +++  + e++d++++l++ +++   a ++ +r  kr+++ ++e+++++++l +d+ + k++ ++ ++
  MMETSP1325-20131115|2997_1   7 EQA--EREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSEIEDLTADFDKEKEMLMNSVR 71 
                 222..222223333333333332336666777779999*****************999999998887 PP

>> PF02841.9  Guanylate-binding protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   9.9    0.0064         4     197     261 ..       4      68 ..       1      72 [] 0.85

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0064
   PF02841.9 197 kaltakekeieaeqakaeaaeaekelleekqkeeeqrmeakeksleehvkqLkekleeereklle 261
                 ++ +++e+e++++q + +aa+++  + e++q++ ++rme k  +++ +++ L+  + +e+e+l++
  MMETSP1325-20131115|2997_1   4 REREQAEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSEIEDLTADFDKEKEMLMN 68 
                 55567889999999999999999999999999999999999999999999999999999998775 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   4.6     0.013       7.8       3      46 ..       8      56 ..       6      71 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.013
   PF08286.6  3 eldnekvrlakelndleselenlqseleelkeeleeleeqene.....g 46
                + ++ek++ ++el+  ++++ + ++++++ ++++e    ++++      
  MMETSP1325-20131115|2997_1  8 QAEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSeiedlT 56
                7899************************999988754444444244332 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   6.9      0.05        31      19      64 ..       6      51 ..       3      53 .. 0.89
   2 ?    6.2   0.5    0.0098       6.1      23      49 ..      35      61 ..      33      67 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.05
  PF04977.10 19 lyqlkqeiaalqaelaklkaeneeLeaevkdLksdedyieeqARse 64
                + q ++e ++ q+ela+ +++  + ea+ +++++  ++  +  Rse
  MMETSP1325-20131115|2997_1  6 REQAEREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETRSE 51
                56899***************************99988888877765 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0098
  PF04977.10 23 kqeiaalqaelaklkaeneeLeaevkd 49
                 +  ++ +++la+ + e+e+L a  ++
  MMETSP1325-20131115|2997_1 35 ARYRKRMERKLAETRSEIEDLTADFDK 61
                566677888888888888888877655 PP

>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.6    0.0097         6      15      74 ..      10      68 ..       2      72 .] 0.74

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0097
   PF11068.3 15 eksKeelqeelqeqleqleqelqqLefqkkkalkeikkqsaqqieeiqqqvekekakree 74
                e+ K+++q el ++ eq+ +  +q     k++++++ ++  ++ie+++  ++kek+ +++
  MMETSP1325-20131115|2997_1 10 EREKQDAQDELAAAQEQVVSAEAQQARYRKRMERKLAETR-SEIEDLTADFDKEKEMLMN 68
                7888999999888887776655565666777777777665.8899999999998887765 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   3.7      0.22   1.4e+02      78     109 ..       2      33 ..       1      36 [. 0.69
   2 ?    9.8   1.6   0.00096       0.6      45      87 ..      29      71 ..      26      72 .] 0.87

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.22
   PF11559.3  78 lktqleqlerelallqekerqlekklktleqk 109
                 l++++eq ere + +q + ++++ ++ ++e++
  MMETSP1325-20131115|2997_1   2 LEREREQAEREKQDAQDELAAAQEQVVSAEAQ 33 
                 66777777777777777777777777776654 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00096
   PF11559.3 45 qqrdrdleqresleetlrkleaeierlqskierlktqleqler 87
                 +  + ++ r+ +e++l + ++eie l+ ++++ k+ l  + r
  MMETSP1325-20131115|2997_1 29 SAEAQQARYRKRMERKLAETRSEIEDLTADFDKEKEMLMNSVR 71
                56678899***************************99877766 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   5.1     0.012       7.6     339     408 ..       2      69 ..       1      72 [] 0.74

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.012
   PF03961.8 339 leeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                 le+e e+ e+e ++ +++l+  ++  +    e+++    +++++++ + ++e+e+l+a++++ ke+l ++
  MMETSP1325-20131115|2997_1   2 LEREREQAEREKQDAQDELAAAQE--QVVSAEAQQARYRKRMERKLAETRSEIEDLTADFDKEKEMLMNS 69 
                 566666666666666666666666..23444667778899999999***************999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1963  (0.143578); expected 273.4 (0.02)
Passed bias filter:                     1135  (0.0830164); expected 273.4 (0.02)
Passed Vit filter:                       194  (0.0141896); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.50u 0.48s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|2998_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0035   16.9   0.9     0.0041   16.7   0.6    1.1  1  PF10721.4 Protein of unknown function (DUF2514)


Domain annotation for each model (and alignments):
>> PF10721.4  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.6     3e-07    0.0041      50     103 ..      22      74 ..      20     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 3e-07
   PF10721.4  50 taaRaeeqrRqaaaeeaakdAqeeaaaaradAadAeaaadrLrqeadklaaaks 103
                 ++ R e  +R++ a e a++A +eaa+++a+A +A+ a++  r+ + k+  + s
  MMETSP1325-20131115|2998_1  22 EKMRVESLKRAKLAAELAEKAANEAAKSAAEAMEASGAGELTRSSLSKI-NSGS 74 
                 57899999**************************************999.3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       698  (0.0510532); expected 273.4 (0.02)
Passed bias filter:                      502  (0.0367174); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 609.51
//
Query:       MMETSP1325-20131115|2989_1  [L=500]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-55  186.4   0.0    9.8e-55  185.3   0.0    1.6  1  PF00069.20 Protein kinase domain
    1.6e-27   96.1   0.1    7.5e-21   74.2   0.0    2.1  2  PF07714.12 Protein tyrosine kinase
    2.4e-06   26.6   0.0    4.8e-06   25.6   0.0    1.4  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0067   16.0   5.7      0.016   14.8   0.1    3.0  4  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.012   14.8   0.3      0.021   14.0   0.2    1.3  1  PF01163.17 RIO1 family
      0.017   15.2   0.5      0.041   14.0   0.4    1.7  1  PF00433.19 Protein kinase C terminal domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.3   0.0   4.3e-58   9.8e-55       4     260 .]      95     390 ..      92     390 .. 0.90

  Alignments for each domain:
  == domain 1    score: 185.3 bits;  conditional E-value: 4.3e-58
                 EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE....................................CEESS-CSS----GGGS-HHHHH.TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTT..S--GGGGCSHHHHHHHHHHHHHT-SSGGG..S--HHHHHTSGGH CS
  PF00069.20   4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.ElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl....................................eksseklttlvgtreYmAPEvll.kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkk..leedepkssskseelkdlikkllekdpak..Rltaeeilkhpwl 260
                 l  +G+G+fG+V  ++k++t++++A+K + k+    k++  ++r E  +l+ +    iv l+ +f+++ +ly+v+ey++ggdl++ll+k  +++ee  ++++ +++ +++ +H+ g iHrDLKp+NiLld +g++k++D+Gl+kk+                                    ++++  +++ vgt++Y+APEvl+ +a++y++++D+WslGvi++e l g +pf+ e   +   + +kil+ +  le +    ++ s+++ d++++l+    ++  R  +++i++hpw+
  MMETSP1325-20131115|2989_1  95 LTLIGRGAFGEVRLVRKRDTREIYALKSMVKNAMVLKNQVGHLRdERDLLAAVGDMWIVGLFFSFQDEHNLYMVMEYLPGGDLMALLMKLDTFTEEATRQYMAEVAMAVNSVHELGYIHRDLKPDNILLDWDGHIKLTDLGLCKKIdvenggggfdawnplgaaamaavtggappppngigaHRDRVLAYSTVGTPDYIAPEVLMaQAQGYGQECDWWSLGVIMFECLVGYTPFYAE---EPVVTCRKILQFSqtLEVPDAVRETLSPQCIDFMHSLISGVDSRlgRNGLQDIMNHPWF 390
                 678**************************9999998888888888****************************************************************************************************************************************9999999***************775899**************************99...555555555554400334444444556**********986555433777*********8 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.2   0.0   3.3e-24   7.5e-21       6     154 ..      97     241 ..      92     248 .. 0.89
   2 !   19.7   0.0   1.4e-07   0.00032     169     234 ..     290     357 ..     277     367 .. 0.81

  Alignments for each domain:
  == domain 1    score: 74.2 bits;  conditional E-value: 3.3e-24
                 EE-------EEEEEEETTTTSSEEEEEEEEE.CT.TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEEST CS
  PF07714.12   6 klGeGafGkVvegtlkgekekkevkVavKtl.ke.saeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardie 154
                  +G+GafG+V   + +    +++   a+K++ k+    +++  ++ +e +++ ++    iv l   + +e++l++v+ey++gGdL  +L k   +++t + + ++++++a +++  ++  ++HrdL   N+Ll+ + ++k++D GL+++i 
  MMETSP1325-20131115|2989_1  97 LIGRGAFGEVRLVRKR----DTREIYALKSMvKNaMVLKNQVGHLRDERDLLAAVGDMWIVGLFFSFQDEHNLYMVMEYLPGGDLMALLMKL--DTFTEEATRQYMAEVAMAVNSVHELGYIHRDLKPDNILLDWDGHIKLTDLGLCKKID 241
                 69********999888....566666777763331334555789999*******************************************98..9*****************************************************993 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 1.4e-07
                 GGGS-HHHHHHSE..EEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---TTSBHHH CS
  PF07714.12 169 vkWmapEslkekk..ftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekpekcpeel 234
                   ++apE+l+++   + ++ D Ws Gv+++E +  g +p+   ++  +++++ + ++ le p+ + e+l
  MMETSP1325-20131115|2989_1 290 PDYIAPEVLMAQAqgYGQECDWWSLGVIMFECLV-GYTPFYAEEPVVTCRKIlQFSQTLEVPDAVRETL 357
                 5799****9988778****************998.8888887777666666647788888888776655 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   2.1e-09   4.8e-06      95     170 ..     168     239 ..     163     246 .. 0.88

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 2.1e-09
   PF06293.9  95 lteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarr 170
                 ++e l g  dL ++l k +++ ee +r+ + +v+ +++ +h+ g  H+dl + nilld ++   ++ l Dl  +++
  MMETSP1325-20131115|2989_1 168 VMEYLPG-GDLMALLMKLDTFTEEATRQYMAEVAMAVNSVHELGYIHRDLKPDNILLDWDG---HIKLTDLGLCKK 239
                 5666655.599999**9999****************************************9...899999877765 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2       1.8   4.2e+03     116     137 ..      48      58 ..      32      82 .. 0.47
   2 ?    1.7   0.0     0.068   1.5e+02      70     108 ..     165     209 ..     135     212 .. 0.81
   3 !   14.8   0.1     7e-06     0.016     145     199 ..     188     241 ..     157     244 .. 0.75
   4 ?    2.8   0.0     0.032        72      75     115 ..     394     433 ..     361     468 .. 0.67

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 1.8
                 GHCTBCTHHHHHHHHHHHHHHH CS
  PF01636.18 116 adflapyltllrllesataalv 137
                 +d++          e++++  +
  MMETSP1325-20131115|2989_1  48 QDRA---------AEQQQQ--Q 58 
                 2222.........222211..1 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.068
                 EEEEEE---HHBCCT......CSHHHHHHHHHHHHHHHHHHHHHS CS
  PF01636.18  70 lfalleyvpgevler......klnarqlpallealaellaalhqa 108
                 l+ ++ey+pg +l        + +++ ++++ +++a +   +h++
  MMETSP1325-20131115|2989_1 165 LYMVMEYLPGGDLMAllmkldTFTEEATRQYMAEVAMAVNSVHEL 209
                 689***********9999888888888888888888888888876 PP

  == domain 3    score: 14.8 bits;  conditional E-value: 7e-06
                 HHHHHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEETTTTEEEE---TT-BBE- CS
  PF01636.18 145 leeleervlaalaallpgaeppvllHgDlhpgNllvdpddgrvgviDfedaglgp 199
                  ee++++ +a+ a ++ +  + + +H+Dl+p+N+l+d  dg++ + D++++   +
  MMETSP1325-20131115|2989_1 188 TEEATRQYMAEVAMAVNSVHELGYIHRDLKPDNILLD-WDGHIKLTDLGLCKKID 241
                 4677777888888888878899***************.44555477877776655 PP

  == domain 4    score: 2.8 bits;  conditional E-value: 0.032
                 E---HHBCCTCSHHHHHHHHHHHHHHHHHHHHHS--TTSHG CS
  PF01636.18  75 eyvpgevlerklnarqlpallealaellaalhqadpaadpl 115
                 +++  ++     + +++ a   ++ ell++l + dp++ pl
  MMETSP1325-20131115|2989_1 394 DWQRLRDVPA-PHKPEDAAEMTEMLELLRDLDATDPRFAPL 433
                 3333333333.556666666666666666666666665554 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.2   9.1e-06     0.021      83     148 ..     167     234 ..     161     244 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 9.1e-06
                 EEEE----TTCEGGCTTTS-...-HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESS.SEEE--- CS
  PF01163.17  83 lvmefigedgvaapklkdvel..eeaeelyeeileemrklykeaglvHaDLSeyNvlvded.kvviIDv 148
                 +vme++   g  ++ l ++++  eea++ y   ++     ++e g++H DL   N+l+d d ++ + D+
  MMETSP1325-20131115|2989_1 167 MVMEYLPG-GDLMALLMKLDTftEEATRQYMAEVAMAVNSVHELGYIHRDLKPDNILLDWDgHIKLTDL 234
                 79****94.444444555554477777666666666778888****************98878888886 PP

>> PF00433.19  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.4   1.8e-05     0.041       8      48 ..     438     475 ..     438     476 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.8e-05
                 XTCCTCCCCTS-SS---..--HHHHTT--GGGGTT--EEXX CS
  PF00433.19   8 TsNFDpeFteesvtdtpigadsspltsskqenFrGFtYvrf 48 
                 T NFD  F++     +p  +d +    + +++F+G+tY+ +
  MMETSP1325-20131115|2989_1 438 TKNFD-NFEDDGKGWDP--SDRDATRHHRDNEFIGYTYRKP 475
                 789**.79999999999..9******************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       621  (0.0454213); expected 273.4 (0.02)
Passed bias filter:                      439  (0.0321094); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.94u 0.39s 00:00:01.33 Elapsed: 00:00:00.63
# Mc/sec: 1901.87
//
Query:       MMETSP1325-20131115|2999_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.60
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|3000_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 437.60
//
Query:       MMETSP1325-20131115|3005_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.07   12.8   0.2        4.6    7.0   0.1    2.1  2  PF13873.1 Myb/SANT-like DNA-binding domain
       0.13   12.1   0.4       0.15   11.9   0.3    1.1  1  PF03369.8 Herpesvirus UL3 protein


Domain annotation for each model (and alignments):
>> PF13873.1  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1   0.00067       4.6      14      37 ..       8      31 ..       4      38 .. 0.88
   2 ?    4.2   0.0     0.005        34      14      38 ..      51      75 ..      41      77 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00067
   PF13873.1 14 velvekrkeilegkksdaatkraK 37
                +e+v+kr++ +e++++ +a+ r +
  MMETSP1325-20131115|3005_1  8 LEEVAKRRDEVENRQQMSASLRGR 31
                79**************99997765 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.005
   PF13873.1 14 velvekrkeilegkksdaatkraKr 38
                 + ++++k+il +k + a  k+ K+
  MMETSP1325-20131115|3005_1 51 SDAMRRQKDILGNKSAGADAKACKE 75
                56799********999999888885 PP

>> PF03369.8  Herpesvirus UL3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   2.2e-05      0.15      10      68 ..       6      65 ..       2      77 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.2e-05
   PF03369.8 10 ssidelGrrqltdtirkdlrlslakltiactktssfsga.aarkkkrkkkekrekrsnks 68
                ss++e+ +r+     r+++ +sl    +a t+ts   g+ +++  + + +++++  +nks
  MMETSP1325-20131115|3005_1  6 SSLEEVAKRRDEVENRQQMSASLRGRKLANTQTSIVFGSdSVEYVSDAMRRQKDILGNKS 65
                89********99999*******************76665155555555467777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|3007_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-11   44.3   0.0    1.4e-11   44.0   0.0    1.1  1  PF02431.10 Chalcone-flavanone isomerase


Domain annotation for each model (and alignments):
>> PF02431.10  Chalcone-flavanone isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0     1e-15   1.4e-11      13     200 ..      37     217 ..      10     219 .. 0.85

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 1e-15
  PF02431.10  13 elqLlGlGvRtvsfl..svkvYaiGlYlaksdisklasklkgkaaaleleeseelfddlldegl......ekairivpvrntdfkhlrdglveailarlkkagkeesyeeeeeealeefkelfksrgsvpkgssllltrsakgslkvsfskegk.kpeeelgevkdervsralllqylaGkkpvSeeakksvaegla 200
                 e++ lGlG+R +++   + kvYa+G+Y+ +++ ++ ++++kg+a+a    +++++f+++l+++         ++++v  r ++ k++ d+  ea+     k+g     ++ ++e   ++ + ++ +     g++l l + ++  l v +sk g+ +p+e+ g ++d+ ++ +l++ +l G +p   e+k s+a gl 
  MMETSP1325-20131115|3007_1  37 ETRSLGLGLRVKKVGpiTAKVYALGVYVGTAA-QAQLDQFKGTASA----DTQDMFAAMLTGPEapevffPRILQLVYARSVTQKQVVDAQREALEG---KVG-----DDVLGEMCAAICKGMGAK--TAIGDTLSLAWVEPDLLRVYCSKVGSpGPGEAHGDIRDAALVALLFKGFL-GLEPRIDELKTSMAAGLG 217
                 55668*********99999************5.5555799999888....8999*******96334333367789**********************...665.....5**********9999666..899***************99998887367*********************.**************9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|3008_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   14.0   0.0      0.037   13.6   0.0    1.3  1  PF13439.1 Glycosyltransferase Family 4


Domain annotation for each model (and alignments):
>> PF13439.1  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.7e-06     0.037     136     174 ..     107     150 ..      64     153 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.7e-06
   PF13439.1 136 l...fkradaviav..SeevadelakygvpeekirvipNGvdte 174
                 +   +++  +v+ v  S++ a+ +++ gv++e+ir+ p Gvd  
  MMETSP1325-20131115|3008_1 107 MgfwNQTGPHVTLVspSQWSANGFVRDGVDPERIRILPHGVDAA 150
                 44445555555544117899**********************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 904.75
//
Query:       MMETSP1325-20131115|3001_1  [L=520]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       504  (0.0368637); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.87u 0.38s 00:00:01.25 Elapsed: 00:00:00.71
# Mc/sec: 1755.08
//
Query:       MMETSP1325-20131115|3009_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.6e-06   24.8   0.3    5.6e-06   24.8   0.2    1.0  1  PF06375.6 Bovine leukaemia virus receptor (BLVR)


Domain annotation for each model (and alignments):
>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.2   4.1e-10   5.6e-06     492     544 ..      27      79 ..       1      92 [. 0.74

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 4.1e-10
   PF06375.6 492 llakicfhhrfsvvervdscasmysrsiqghhvcllvkkgeksvsvdgkcsdp 544
                 + a   f h   v +     as+y++   g hv llvk  +ksvsvd k s +
  MMETSP1325-20131115|3009_1  27 VSAIAGFAHARVVEKEAKKAASLYAQFPSGDHVALLVKVKDKSVSVDIKASVA 79 
                 44555566655555557899****************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 441.68
//
Query:       MMETSP1325-20131115|3011_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-13   48.7   0.0    8.3e-13   47.9   0.0    1.4  1  PF04564.10 U-box domain


Domain annotation for each model (and alignments):
>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   6.1e-17   8.3e-13       3      68 ..     100     165 ..      98     167 .. 0.97

  Alignments for each domain:
  == domain 1    score: 47.9 bits;  conditional E-value: 6.1e-17
                 GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHH CS
  PF04564.10   3 defldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKekIdkfl 68 
                 + f + i   l +dPv+ P+g+ ++r+ti ++l+ +++ +P++++pl+ ++l  + +  e+  ++ 
  MMETSP1325-20131115|3011_1 100 ETFQCAINHHLVTDPVLSPEGVLFERATILHWLETQGSICPVNNTPLAASDLREDVAFNERLSRWR 165
                 78************************************************************9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 795.93
//
Query:       MMETSP1325-20131115|3013_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 334.59
//
Query:       MMETSP1325-20131115|3015_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 526.26
//
Query:       MMETSP1325-20131115|3016_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.46
# Mc/sec: 286.52
//
Query:       MMETSP1325-20131115|3018_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.57
# Mc/sec: 880.04
//
Query:       MMETSP1325-20131115|3021_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0087   16.3   0.9     0.0091   16.2   0.7    1.1  1  PF12200.3  Domain of unknown function (DUF3597)
  ------ inclusion threshold ------
      0.013   14.7   8.2      0.015   14.6   5.7    1.0  1  PF06810.6  Phage minor structural protein GP20
      0.032   13.8   2.1      0.048   13.3   1.3    1.3  1  PF08962.6  Domain of unknown function (DUF1876)
      0.033   13.8  14.7      0.055   13.1  10.2    1.5  1  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.062   12.3  11.4      0.069   12.2   7.9    1.1  1  PF13851.1  Growth-arrest specific micro-tubule binding
      0.067   12.7  10.9      0.081   12.4   7.5    1.1  1  PF03962.10 Mnd1 family
       0.14   12.2   1.1       0.16   12.1   0.8    1.3  1  PF10193.4  Telomere length regulation protein
       0.15   11.2   8.8       0.18   10.9   6.1    1.1  1  PF08687.6  Apx/Shroom domain ASD2
       0.16    9.7   7.7       0.15    9.7   5.4    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
       0.17   11.8   9.2       0.24   11.3   6.4    1.2  1  PF03980.9  Nnf1
       0.17   11.4   9.8       0.19   11.3   6.8    1.1  1  PF04859.7  Plant protein of unknown function (DUF641)
       0.23   10.9   5.9       0.28   10.6   4.0    1.3  1  PF02312.12 Core binding factor beta subunit
       0.34    8.9   2.5       0.35    8.9   1.7    1.0  1  PF05925.7  Enterobacterial virulence protein IpgD
       0.37   10.5  15.0       0.43   10.2  10.4    1.1  1  PF12718.2  Tropomyosin like
       0.37   10.4  13.2       0.43   10.2   8.9    1.3  1  PF07926.7  TPR/MLP1/MLP2-like protein
       0.63    9.9  14.4       0.75    9.7  10.0    1.2  1  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
       0.76    9.2   4.7        0.9    8.9   3.3    1.2  1  PF12934.2  FTO C-terminal domain
       0.77    8.2   9.9       0.86    8.0   6.9    1.0  1  PF08317.6  Spc7 kinetochore protein
       0.93    9.3   5.9       0.72    9.7   3.2    1.5  2  PF11544.3  Spindle pole body component Spc42p
       0.98    8.1  14.4       0.99    8.1  10.0    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        1.2    8.6  13.9        1.7    8.1   9.6    1.3  1  PF04156.9  IncA protein
        1.2    6.4   3.5        1.2    6.5   2.4    1.1  1  PF05478.6  Prominin
        1.3    8.9  11.9        1.6    8.6   8.3    1.3  1  PF11068.3  Protein of unknown function (DUF2869)
        2.3    6.9   8.0        2.4    6.8   5.6    1.1  1  PF14362.1  Domain of unknown function (DUF4407)
        2.6    8.6   6.5        8.2    7.1   4.5    1.7  1  PF07303.8  Occludin homology domain
        3.5    4.7  14.8        3.7    4.6  10.3    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
        3.6    7.3  15.4        4.1    7.1  10.7    1.1  1  PF11559.3  Afadin- and alpha -actinin-Binding
        4.1    6.6   9.0        4.9    6.4   6.2    1.0  1  PF12269.3  CpG binding protein zinc finger C terminal domain
        4.3    6.5  14.5        5.7    6.1  10.0    1.3  1  PF11180.3  Protein of unknown function (DUF2968)
        4.7    5.4   7.2        5.4    5.1   5.0    1.1  1  PF03961.8  Protein of unknown function (DUF342)
          5    6.7   9.8        5.1    6.6   6.0    1.6  1  PF08286.6  Spc24 subunit of Ndc80
        6.8    5.1   8.6        6.9    5.1   6.0    1.1  1  PF06785.6  Uncharacterised protein family (UPF0242)
        7.6    6.9  12.4         29    5.0   8.2    1.8  1  PF13600.1  N-terminal domain of unknown function (DUF4140)
        8.1    5.1  10.3        8.5    5.0   7.2    1.0  1  PF04111.7  Autophagy protein Apg6
        8.3    6.1  14.0        3.3    7.4   7.4    2.0  1  PF12958.2  Protein of unknown function (DUF3847)


Domain annotation for each model (and alignments):
>> PF12200.3  Domain of unknown function (DUF3597)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.7   2.3e-05    0.0091      55     108 ..      27      80 ..       6      84 .] 0.83

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 2.3e-05
   PF12200.3  55 ldklaakkgeklnwrtSiVDllKlldlDsSleaRkeLAkeLgysgd.tndsAemN 108
                 l++ +++ +++l + +++V  lK+ +l  S e+R++L +eL+ + +  ++sA+m 
  MMETSP1325-20131115|3021_1  27 LQAESDRAKQELAHAEALVQQLKA-KLNESEEHRQQLGDELKAERQrSEESARMV 80 
                 34445568999************8.8****************9987578899985 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   5.7   3.9e-05     0.015       3      72 ..       5      75 ..       3      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3.9e-05
   PF06810.6  3 qikkimaekgkdiqeeKskldkaeeeldslkeqlkerdkqiedLkkkvkdneeLkkki.eklkeknkkkke 72
                + +++  ++++  ++ + +l++ ++e d +k++l+ ++  +++Lk+k +++ee  +++ ++lk++ +  +e
  MMETSP1325-20131115|3021_1  5 KLQDVERLRSEGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLgDELKAERQRSEE 75
                56778888888888899*****************************************4568887774444 PP

>> PF08962.6  Domain of unknown function (DUF1876)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.3   0.00012     0.048      17      69 ..      30      81 ..      22      83 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.00012
   PF08962.6 17 ertRAkArlrwdgkelvgvGlArldpaDenvpriGdelavARALsdLakqllk 69
                e  RAk  l  ++  lv    A+l+ ++e+  ++Gdel + R  s+ + ++++
  MMETSP1325-20131115|3021_1 30 ESDRAKQELAHAE-ALVQQLKAKLNESEEHRQQLGDELKAERQRSEESARMVT 81
                5568888888776.4777789************************99999987 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1  10.2   0.00014     0.055      10      73 ..       5      69 ..       2      81 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 0.00014
   PF12329.3 10 KdeqIaqLmeEgekLskkelkh.nntikkLrkknkelekeieelkkkleklekeleeleerlkra 73
                K + ++ L++Ege+    +l++  ++ +  +++++++e+ +++lk+kl+++e+  ++l ++lk++
  MMETSP1325-20131115|3021_1  5 KLQDVERLRSEGENAHRMQLQQlQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAE 69
                6678999*******99987766156899********************************99975 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   7.9   0.00018     0.069      42     101 ..      16      76 ..       2      83 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00018
   PF13851.1  42 keekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLk.nlkaklkeleke 101
                  e++ + +++++++e  r k++L++ae+ v++Lk kl++ e+++q+L  +lka+++++e+ 
  MMETSP1325-20131115|3021_1  16 GENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGdELKAERQRSEES 76 
                 35667789999*********************************99953688888877775 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   7.5   0.00021     0.081      60     121 ..      13      75 ..      10      83 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00021
  PF03962.10  60 pseakkklkteleklkkeleelkqrikelqaeiekekkkreeteeree.lleelkeleeelkk 121
                  se  ++ + +l++l++e +++kq+++ ++a +++ k+k +e+ee+++ l +elk+ +++ ++
  MMETSP1325-20131115|3021_1  13 RSEGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQqLGDELKAERQRSEE 75 
                 5777889999***************************99999966555266777777766655 PP

>> PF10193.4  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.8   0.00041      0.16      11      54 ..      26      66 ..       9      82 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00041
                HHT------S-SHHHHHHHHHHHHS-----S---------HHHH CS
   PF10193.4 11 aLrsdeedpervelaLkaaekLirkktdfgtevrelaeeLlkvL 54
                 L+    + +r ++ L++ae+L+++ ++  +e +e+ ++L + L
  MMETSP1325-20131115|3021_1 26 QLQ---AESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDEL 66
                344...45799999***********99999********997655 PP

>> PF08687.6  Apx/Shroom domain ASD2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   6.1   0.00046      0.18      67     131 ..      20      81 ..       2      83 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00046
   PF08687.6  67 lltklkdlqeeqeeeeeddelkekkveLieslgkkladleeeqealleeiqannalgeeveakvk 131
                  +++l++   + e++  ++el++ ++ L+++l++kl++ ee++++l +e +a+ ++ ee + +v+
  MMETSP1325-20131115|3021_1  20 HRMQLQQ--LQAESDRAKQELAHAEA-LVQQLKAKLNESEEHRQQLGDELKAERQRSEESARMVT 81 
                 3334444..44666666889999888.*****************************999888886 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   5.4   0.00038      0.15      67     123 ..      13      78 ..       1      84 [] 0.76

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00038
                 X.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14  67 k.........evedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelr 123
                 +         ++++l++e ++ ++el  +e+  ++L+++lne ee+r++l  e +   + ++e++r
  MMETSP1325-20131115|3021_1  13 RsegenahrmQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEESAR 78 
                 2333333444999*************************************9999888886655555 PP

>> PF03980.9  Nnf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   6.4   0.00062      0.24      38     110 ..       8      71 ..       3      72 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00062
   PF03980.9  38 eLDelieeAkerkesnkeeaekpvaidsltPeellaahLvpllekqleeLnarlqklqaeNaeladeiqelre 110
                 + ++l +e ++          +++++ +l++e + a +   + e+  ++L+a+l++ +++ ++l de+++ r+
  MMETSP1325-20131115|3021_1   8 DVERLRSEGEN---------AHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQ 71 
                 44444444444.........4569*********************************************9997 PP

>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   6.8   0.00049      0.19      56     126 ..       4      74 ..       1      80 [. 0.83

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00049
   PF04859.7  56 kkLselkrlyrrkeakgsakdailaaeiqeqrsllktyeivvkkLeaelrakdseieelrekleeakkank 126
                 +kL+++ rl ++ e++   + ++l+ae ++ +++l+  e++v++L+a+l++ ++  ++l  +l+++ ++++
  MMETSP1325-20131115|3021_1   4 QKLQDVERLRSEGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSE 74 
                 5677777777777777778999*********************************9999999977666554 PP

>> PF02312.12  Core binding factor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.0   0.00071      0.28     118     166 ..      25      73 ..       8      79 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00071
  PF02312.12 118 gclevdeeraqkEdailreqleeakqrlrefeekkrkyreeeeaeleed 166
                  +l+ +++ra++E a +++ +++ k +l+e ee+++++ +e +ae +++
  MMETSP1325-20131115|3021_1  25 QQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRS 73 
                 5688999******************************999988877655 PP

>> PF05925.7  Enterobacterial virulence protein IpgD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.7   0.00088      0.35     102     151 ..      19      70 ..       7      82 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00088
   PF05925.7 102 aeqlelaklkadrpatkqeeaaakvlkknliel..iaeriraqdGlkakkeh 151
                 a++++l +l+a+   +kqe a a++l + l+     +e+ r+q+G + k e+
  MMETSP1325-20131115|3021_1  19 AHRMQLQQLQAESDRAKQELAHAEALVQQLKAKlnESEEHRQQLGDELKAER 70 
                 578999*******************99998765366899*****97777663 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2  10.4    0.0011      0.43      68     135 ..       9      77 ..       2      84 .] 0.49

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0011
   PF12718.2  68 kekkkteaealtr.riqlLEeeleesekrLketteklreadkkaeeseRkvkaLEeerdeweekleele 135
                  e  ++e e+  r ++q+L+ e ++++++L+++    ++++ k +ese ++++L +e +++ ++ ee +
  MMETSP1325-20131115|3021_1   9 VERLRSEGENAHRmQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEESA 77 
                 455555555332224555555555555555555555555555555555555555555555555555443 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   8.9    0.0011      0.43      60     112 ..      23      75 ..      14      82 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0011
   PF07926.7  60 eLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevelselek 112
                 +L++l++e +++++e+++ ++++++ ka+lne+ee+ ++  ++L+ e + +e+
  MMETSP1325-20131115|3021_1  23 QLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEE 75 
                 89999999**********************99999988888888888887776 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7  10.0    0.0019      0.75      38      95 ..      19      76 ..       3      83 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0019
   PF13094.1 38 aelksielLqeeirreeaelekdeekleeLeknakalererkeesknlhpvlqelese 95
                a + ++++Lq+e +r  +el++ e   ++L+++  + e+ r ++  +l+   q++e++
  MMETSP1325-20131115|3021_1 19 AHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEES 76
                56789*************************************9999977766666655 PP

>> PF12934.2  FTO C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.3    0.0023       0.9      69     132 ..       3      66 ..       2      80 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHHHH---HHHHHHHHT-------S--TTTTTTHHHHHHHHHHHHHHHHHHSSSG CS
   PF12934.2  69 tqriaeLteawdkmElvtrlvlkklkrasetteqkeealdvllelLterkelReewaaRtrski 132
                 tq+++++++  ++ E+  r+ l++l+++s +++q+    ++l+++L+++ +  ee+++   +++
  MMETSP1325-20131115|3021_1   3 TQKLQDVERLRSEGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDEL 66 
                 57888889999999**********************************9999999999877766 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   6.9    0.0022      0.86     197     269 ..      10      75 ..       2      83 .. 0.53

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0022
   PF08317.6 197 rqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekilee 269
                 ++l++e e+       + r +L++l+ + ++ +++l++ e+ +q+lk+k+++++e+ ++l +e++++++  ee
  MMETSP1325-20131115|3021_1  10 ERLRSEGEN-------AHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEE 75 
                 333333333.......445555555555555555555555556666666666666666666666655555554 PP

>> PF11544.3  Spindle pole body component Spc42p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       7.3   2.8e+03      44      50 ..       5      11 ..       3      26 .. 0.50
   2 ?    9.7   3.2    0.0018      0.72       7      56 ..      24      73 ..      18      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 7.3
                HHHHHHH CS
   PF11544.3 44 KLeddlq 50
                KL+d ++
  MMETSP1325-20131115|3021_1  5 KLQDVER 11
                4444222 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.0018
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF11544.3  7 NKeLnkklrekqeEierLnvlvgslRaKLiKYtelnkKLeddlqnlqvsn 56
                  +L+++ +  ++E+ + + lv +l+aKL    e  + L d+l++ ++++
  MMETSP1325-20131115|3021_1 24 LQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRS 73
                567899999999*****************************999887742 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  10.0    0.0025      0.99      41     115 ..       7      81 ..       1      84 [] 0.74

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0025
   PF10186.4  41 kkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlek 115
                 + ve++ +e+en ++ ++qql++e  + k++++   + ++qlk+++ +  e++++l ++l+  r++ e sa +++
  MMETSP1325-20131115|3021_1   7 QDVERLRSEGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEESARMVT 81 
                 455555555666677888888888888888888888888888888888888888888888888888776665555 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   9.6    0.0043       1.7      76     136 ..      17      77 ..       2      84 .] 0.44

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0043
   PF04156.9  76 e.......srlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesle 136
                 e       ++lq+e   ++++l+ +e  ++ql  +l+e+e++ ++l ++l+ ++       +r e+ +
  MMETSP1325-20131115|3021_1  17 EnahrmqlQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAER-------QRSEESA 77 
                 222333333444455555555555555555555555555555555555555544.......3333333 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   2.4     0.003       1.2     246     288 ..      35      77 ..       4      82 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.003
   PF05478.6 246 gqvlkemkeaLesvsktvkelkeegsqlesglssvrrrlnell 288
                  q+l  +++ +++++++++e +e  +ql ++l++ r+r +e+ 
  MMETSP1325-20131115|3021_1  35 KQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEESA 77 
                 468899999****************************988765 PP

>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   8.3    0.0042       1.6      28      84 ..      16      67 ..       2      82 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0042
   PF11068.3 28 qleqleqelqqLefqkkkalkeikkqsaqqieeiqqqvekekakreeqkkqllqqle 84
                  ++  ++lqqL+ ++ +a +e+      + e++ qq++++ ++ ee+++ql ++l+
  MMETSP1325-20131115|3021_1 16 GENAHRMQLQQLQAESDRAKQELA-----HAEALVQQLKAKLNESEEHRQQLGDELK 67
                455566778888888777777766.....5556666666666666666666655554 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.6    0.0061       2.4     121     184 ..       8      71 ..       1      83 [. 0.51

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0061
   PF14362.1 121 eqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvy 184
                 +++ + ++ +++ + +l++l+ae +++++el+ a+a v+++++++++ +e +++ g++ k +++
  MMETSP1325-20131115|3021_1   8 DVERLRSEGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQ 71 
                 4555555555555556666666666666666666666666666666555544333333333222 PP

>> PF07303.8  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   4.5     0.021       8.2      23      72 ..      23      73 ..       4      82 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.021
   PF07303.8 23 eYkeLqaeldeiskklaeldaelkslkegseeykeva.kileeyeklkkrs 72
                + ++Lqae d+++++la+ +a +++lk + +e +e + ++ +e +  ++rs
  MMETSP1325-20131115|3021_1 23 QLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRqQLGDELKAERQRS 73
                567899999999999999999999998876666666557778877766544 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  10.3    0.0094       3.7     624     684 ..      18      78 ..       2      84 .] 0.72

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0094
   PF12128.3 624 kqaeeqlkqlnaeleeakravaeakqalkqarlelqrlkneqqslkdklekalaerkqqae 684
                 ++   ql+ql+ae + ak+++a+a++ ++q + +l+  ++++q+l d+l++ +++++++a+
  MMETSP1325-20131115|3021_1  18 NAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEESAR 78 
                 3334589999999999999999999999999999999999999999998888777766654 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  10.7     0.011       4.1      52     115 ..      15      78 ..       2      84 .] 0.49

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.011
   PF11559.3  52 eqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklkneke 115
                 e ++++  +l++l+ae++r +++++  +  ++ql+ +l  ++e  +ql  +lk + q   + + 
  MMETSP1325-20131115|3021_1  15 EGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRSEESAR 78 
                 2333444455555555555555555555555555555555555555555555555555555444 PP

>> PF12269.3  CpG binding protein zinc finger C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   6.2     0.013       4.9      11      80 ..       4      73 ..       2      82 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.013
   PF12269.3 11 qriqewnlspcvaeeedkkalekirkkqaevrtelaelekksqeletiierakkltvkeeeeqedaeeed 80
                q++q+ ++  +++e+ ++ +l++++ +   +++ela  e   q+l++ +++++++  +  +e +++ +  
  MMETSP1325-20131115|3021_1  4 QKLQDVERLRSEGENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRS 73
                899********************************************99998877665555544443332 PP

>> PF11180.3  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  10.0     0.015       5.7     105     155 ..      22      72 ..       2      83 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.015
   PF11180.3 105 irraqleaqkaqlerliaasearaerLqadlelareQeaqvaarqkqarke 155
                 ++  ql+a+  ++++++a +ea +++L+a l+  +e ++q+ ++ k+ r+ 
  MMETSP1325-20131115|3021_1  22 MQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQR 72 
                 556788899999999999999999999999999999999998888888875 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.0     0.014       5.4     352     408 ..      18      69 ..       2      82 .. 0.53

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.014
   PF03961.8 352 klkkk.lkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                 +  ++ l++l+++      +++ k++l+ +++  ++lk +l+e e+++++l +el+  
  MMETSP1325-20131115|3021_1  18 NAHRMqLQQLQAE------SDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAE 69 
                 2222234444442......234456666666667777777777777777777777665 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.0     0.013       5.1       8      56 ..      24      74 ..      17      84 .] 0.54

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.013
   PF08286.6  8 kvrlakelndleselenlqseleelkeeleeleeqene..gkeedeeeaee 56
                +++l+ e++  ++el   ++ +++lk++l+e ee  ++  ++ + e++++e
  MMETSP1325-20131115|3021_1 24 LQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQlgDELKAERQRSE 74
                556666666666666666666666666666666666665422222222222 PP

>> PF06785.6  Uncharacterised protein family (UPF0242)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   6.0     0.018       6.9     131     188 ..       5      69 ..       1      82 [. 0.52

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.018
   PF06785.6 131 kleelvarlkeen.......qclklqldalvqecrekeeesqelnrelaetlayqqalndeyqat 188
                 kl+++ + + e +       q+l+ + d + qe    e  +q+l+ +l+e+  ++q+l de +a 
  MMETSP1325-20131115|3021_1   5 KLQDVERLRSEGEnahrmqlQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDELKAE 69 
                 44444444444330111101333333344445555555556777777777777778887777764 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   8.2     0.074        29      47     100 ..      19      73 ..      10      76 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.074
   PF13600.1  47 n..atvlsvsvrrrdlqekdadaaseelaeleaelraledelarleaekealeari 100
                 +  +++++++ ++++++ ++   a++ +++l+a+l + e+ +++l++e++a ++r 
  MMETSP1325-20131115|3021_1  19 AhrMQLQQLQAESDRAK-QELAHAEALVQQLKAKLNESEEHRQQLGDELKAERQRS 73 
                 35567778888887765.788889999***********************999886 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   7.2     0.022       8.5      58     118 ..      12      71 ..       2      83 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.022
                 XXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX CS
   PF04111.7  58 qnkeeenvealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleee.eeqyl 118
                  + e    +a  + l++L+ e +r  +el + e   ++l+ +l+e +e++++l +e +++ +
  MMETSP1325-20131115|3021_1  12 LRSE--GENAHRMQLQQLQAESDRAKQELAHAEALVQQLKAKLNESEEHRQQLGDElKAERQ 71 
                 3333..45677889999**********************************99877333333 PP

>> PF12958.2  Protein of unknown function (DUF3847)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   7.4    0.0085       3.3       2      40 ..      23      60 ..      22      83 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0085
   PF12958.2  2 kleqlreeiekaekklrkaeeklkqLknqekklekkeRk 40
                +l+ql++e+++a+++l++ae   +qLk ++++ e+ +R+
  MMETSP1325-20131115|3021_1 23 QLQQLQAESDRAKQELAHAEALVQQLKAKLNESEE-HRQ 60
                69***************************999874.343 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1807  (0.132168); expected 273.4 (0.02)
Passed bias filter:                     1027  (0.075117); expected 273.4 (0.02)
Passed Vit filter:                       204  (0.014921); expected 13.7 (0.001)
Passed Fwd filter:                        46  (0.00336454); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              35  [number of targets reported over threshold]
# CPU time: 0.60u 0.43s 00:00:01.03 Elapsed: 00:00:00.53
# Mc/sec: 379.80
//
Query:       MMETSP1325-20131115|3023_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 330.06
//
Query:       MMETSP1325-20131115|3022_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 425.01
//
Query:       MMETSP1325-20131115|3017_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.69
# Mc/sec: 1205.12
//
Query:       MMETSP1325-20131115|3026_1  [L=419]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-38  128.8   0.1    2.5e-37  127.1   0.0    1.9  2  PF02852.17 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
    2.5e-24   86.1   0.2    4.2e-24   85.4   0.1    1.4  1  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
      1e-19   70.5   1.0      3e-19   69.0   0.7    1.9  1  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
    3.9e-05   23.6   0.1       0.38   10.6   0.0    2.3  2  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.019   13.7   0.1       0.18   10.5   0.0    2.0  2  PF13434.1  L-lysine 6-monooxygenase (NADPH-requiring)
      0.021   14.3   0.4      0.042   13.3   0.3    1.5  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
      0.025   14.0   0.1      0.041   13.3   0.1    1.3  1  PF01262.16 Alanine dehydrogenase/PNT, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02852.17  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.5   2.9e+03      63      82 ..     140     159 ..     112     175 .. 0.60
   2 !  127.1   0.0   1.3e-40   2.5e-37       1     109 [.     254     362 ..     254     363 .. 0.99

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 1.5
                 ---EEEETTHHHHHHHHHHH CS
  PF02852.17  63 lGahivGpgaseliqelava 82 
                 lG +++G ++++   +lav 
  MMETSP1325-20131115|3026_1 140 LGTKVMGAEVKDGKVHLAVE 159
                 77888888777744444443 PP

  == domain 2    score: 127.1 bits;  conditional E-value: 1.3e-40
                 BEEEEESSSEEEE----HHHHHHHT..EEEEEEEECCGHHTTTTT.CCEEEEEEEETTTTBB---EEEETTHHHHHHHHHHHHHCT-BHHHHHTSBSSSSSSGGGHHHH CS
  PF02852.17   1 vpsvvftdpeiasvGlteeeAkkaggeikvgklpfkandralayaetkgfvKlvvdaetgkvlGahivGpgaseliqelavaikagltvedlantvfihPtlsealkea 109
                 +p vv+t pe+a+vG++e e+k++g++++vg++pf+an+ra+a ++++gfvK++  + t+++lG+hi+Gp+a+e+i+e+ + +++g++ ed+a+t+++hPtlsea+kea
  MMETSP1325-20131115|3026_1 254 IPGVVYTFPEVATVGKSEDELKEEGVAYNVGNFPFSANSRARAVDQSDGFVKILSCKTTDRILGCHIIGPNAGEMIAEAVLGMEYGASSEDIARTCHAHPTLSEAFKEA 362
                 79*********************************************************************************************************98 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.4   0.1   2.1e-27   4.2e-24      71     199 ..       2     225 ..       1     226 [. 0.96

  Alignments for each domain:
  == domain 1    score: 85.4 bits;  conditional E-value: 2.1e-27
                 TCEEEHCHEEEEEETTTTEEEEEEEEEEEEEETEEEEEEESEEEE----B----.TGCCHTEEEC.SSHHHHHHHHHHCSTTTEEEEE-................................................................................................-GGGC.HHSS--BESSSSBBE-TTSBCSSTTEEE---TCEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................................................................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9  71 gieilleknvvkidsgskkvvqeagavkadekgkgrdikydklviAtGarprtl.gipgvevailargvedsdeilellekpkkvvvvG................................................................................................tklla.ekagveldprggivVdeylrtsvpgiyaiGDvaegk 199
                 gie+l++k +v++ +g++k++ ++g + a ++g  +d++ ++++iAtG++ + l ++p   v++ ++++ ds+ +l+l e p+k+ v+G                                                                                                t++l+ e++g+e+d+ g++vVd++++t+vp+i+aiGD+++g+
  MMETSP1325-20131115|3026_1   2 GIEFLFKKYKVDYLKGHGKITGPNGVNVALTEGGSQDVETKNILIATGSEVTPLpPVP---VDNAGKKIVDSTGALDLTEVPEKMTVIGggviglemgsvwrrlgtevtvvefldrlmpgtdseiakkfqtickkqgmkfklgtkvmgaevkdgkvhlavenvkkgtpeeivsdvclvsigrrpfTQGLGlEDVGIETDRLGRVVVDSHFQTKVPSIWAIGDAIDGP 225
                 899*****************9999999999*******************965333555...89999*************************************************************************************************************************************************************9876 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   0.7   1.6e-22     3e-19       1      76 [.      82     155 ..      82     164 .. 0.92

  Alignments for each domain:
  == domain 1    score: 69.0 bits;  conditional E-value: 1.6e-22
                 EEEEE---HHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEETTEEEEEEEESEEEEEEE CS
  PF00070.22   1 rvvvvGGGyiGlElAaalaklgkkVtvierrdrllraldeeiakilqkklekngievllntkveeiegsadgvevk 76 
                 +++v+GGG+iGlE+++++++lg +Vtv+e +drl+++ d+eiak +q+  +k+g++++l+tkv   e ++ +  v+
  MMETSP1325-20131115|3026_1  82 KMTVIGGGVIGLEMGSVWRRLGTEVTVVEFLDRLMPGTDSEIAKKFQTICKKQGMKFKLGTKVMGAEVKDGK--VH 155
                 579*************************************************************99977665..44 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00019      0.38     115     177 ..      27      90 ..       8     111 .. 0.74
   2 !   10.6   0.0    0.0002      0.39      80     146 ..     119     190 ..     113     213 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00019
   PF13738.1 115 fevrvtdg..revrakalvlatgavskpktlglpg.sadkeavhleevlepedlkgkrvvVvGggh 177
                  +v +t+g  ++v++k++++atg   +p  +++p   a k+ v ++ +l+  +  +++++V+Ggg 
  MMETSP1325-20131115|3026_1  27 VNVALTEGgsQDVETKNILIATGSEVTPL-PPVPVdNAGKKIVDSTGALDLTEV-PEKMTVIGGGV 90 
                 55666665679************644444.445553566799999999999876.8999*****95 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0002
   PF13738.1  80 sgeeisayledvarrlglkvrlstrvteveregdrfevrvtdg.....revrakalvlatgavskpktlglp 146
                 + +ei++ ++ + +++g+k++l+t+v+ +e ++++ ++ v++      +e+ +++ ++++g +  ++ lgl+
  MMETSP1325-20131115|3026_1 119 TDSEIAKKFQTICKKQGMKFKLGTKVMGAEVKDGKVHLAVENVkkgtpEEIVSDVCLVSIGRRPFTQGLGLE 190
                 6689**********************************9998888899999999999999975555544444 PP

>> PF13434.1  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   9.4e-05      0.18     138     204 ..      31      94 ..      11     127 .. 0.79
   2 ?    1.3   0.0      0.06   1.2e+02     288     338 ..     130     179 ..     120     182 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 9.4e-05
   PF13434.1 138 daegeeeellarnlvlgtGte.pylPealkklegkervfhsseylerkeellkkkriavvGsGqSaae 204
                  +eg ++ ++++n+ ++tG+e   lP++  +  g ++++ s+  l+ +   + +++++v+G+G  + e
  MMETSP1325-20131115|3026_1  31 LTEGGSQDVETKNILIATGSEvTPLPPVPVDNAG-KKIVDSTGALDLT---EVPEKMTVIGGGVIGLE 94 
                 4678899************541456766666555.9999999999876...7999********88777 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.06
   PF13434.1 288 vegekrvrllpnreveaveaegkgeveltlrneesgeeetleadavvlATG 338
                 + +++ ++++  ++v  +e +  g+v+l ++n ++g+ e++ +d+ +++ G
  MMETSP1325-20131115|3026_1 130 ICKKQGMKFKLGTKVMGAEVKD-GKVHLAVENVKKGTPEEIVSDVCLVSIG 179
                 4456678889999999999986.79***************99999887766 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   2.1e-05     0.042       2      56 ..      83     137 ..      82     165 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.1e-05
                 EEEE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHHHHHTTCH..... CS
  PF02737.13   2 vaVvGaGtmGagiAavfaragleVvlvdiseealekalerieksleklvekgklk 56 
                  +V+G G++G ++ +v  r g eV++v+  +  +     +i+k+++ + +k+ +k
  MMETSP1325-20131115|3026_1  83 MTVIGGGVIGLEMGSVWRRLGTEVTVVEFLDRLMPGTDSEIAKKFQTICKKQGMK 137
                 79***************************99999999999999998888887776 PP

>> PF01262.16  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   2.1e-05     0.041      19      69 ..      79     129 ..      62     157 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.1e-05
                 ---EEEEE-------HHHHHHHH---EEEE--SSTTHHHHHHH----BSSS CS
  PF01262.16  19 kpakvvviGaGvvGlgAievakglgaevvaldkrperleqveslgaefvev 69 
                  p k++viG+Gv Gl+  +v ++lg ev++++ ++  +   +s  a++ ++
  MMETSP1325-20131115|3026_1  79 VPEKMTVIGGGVIGLEMGSVWRRLGTEVTVVEFLDRLMPGTDSEIAKKFQT 129
                 5899***************************99988887777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.78u 0.37s 00:00:01.14 Elapsed: 00:00:00.57
# Mc/sec: 1731.16
//
Query:       MMETSP1325-20131115|3028_1  [L=343]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-16   58.6   1.4    3.8e-05   22.5   0.0    4.9  4  PF00036.27 EF hand
    2.8e-15   56.0   1.8    1.7e-07   31.1   0.1    3.5  4  PF13499.1  EF-hand domain pair
    3.9e-15   54.1  11.2    7.4e-05   22.1   0.0    4.8  5  PF13405.1  EF-hand domain
    2.2e-09   36.6   9.2      2e-06   27.1   0.0    3.7  4  PF13833.1  EF-hand domain pair
    6.3e-07   28.3  16.0     0.0002   20.4   0.0    4.2  5  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   2.5e-05     0.067       2      28 ..     158     184 ..     157     185 .. 0.91
   2 ?    1.1   0.2     0.097   2.7e+02       7      26 ..     206     225 ..     197     228 .. 0.67
   3 !   17.4   0.0     6e-07    0.0016       2      28 ..     269     295 ..     268     296 .. 0.92
   4 !   22.5   0.0   1.4e-08   3.8e-05       2      27 ..     309     334 ..     308     335 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++ +F++ D D++G ++  E+k+++++
  MMETSP1325-20131115|3028_1 158 WRALFDKEDSDHSGLLDAGELKSLIRR 184
                 6889******************99886 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.097
                 HHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   7 kefDkDgdGkIsfeEfkeal 26 
                 +e+D   dG + +++++++l
  MMETSP1325-20131115|3028_1 206 DEYDGHEDGGVCLDDLLAFL 225
                 56677777777777777665 PP

  == domain 3    score: 17.4 bits;  conditional E-value: 6e-07
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++ +F++ D Dg+G +++ E+k++l++
  MMETSP1325-20131115|3028_1 269 WQALFDHQDADGSGELDLGELKSLLRR 295
                 6889********************986 PP

  == domain 4    score: 22.5 bits;  conditional E-value: 1.4e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 + ++Fk++DkD++G++s++E+ ++l+
  MMETSP1325-20131115|3028_1 309 VGRLFKKLDKDRSGTVSVDELFALLR 334
                 6689*****************99886 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.4   6.7e+03      40      62 ..      76      98 ..      43      99 .. 0.67
   2 !   20.9   0.4   9.4e-08   0.00026       3      62 ..     159     221 ..     154     225 .. 0.79
   3 !    7.8   0.1    0.0012       3.2       1      33 [.     200     232 ..     200     260 .. 0.80
   4 !   31.1   0.1   6.2e-11   1.7e-07       5      65 ..     272     332 ..     239     333 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 2.4
   PF13499.1 40 evldyifkelDkngdGvlsfeEf 62
                 ++  +++e+  + + vl+ ++f
  MMETSP1325-20131115|3028_1 76 AEVATLVQEVGPDESSVLNQTDF 98
                45566677777777777777777 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 9.4e-08
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkn...gdGvlsfeEf 62 
                 + +F++ D+d++g ld  eL+ l+++ +    +e +++++ ++f+elD+     dG + ++++
  MMETSP1325-20131115|3028_1 159 RALFDKEDSDHSGLLDAGELKSLIRRVLKIPPRELSDQEVMQLFRELDEYdghEDGGVCLDDL 221
                 5579999*********************888899999999999**776532226665555555 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0012
   PF13499.1   1 klkeaFkllDkdgdgyldkeeLlrllkhlgsel 33 
                 +l+++ +++D + dg +  ++Ll++l  +++ +
  MMETSP1325-20131115|3028_1 200 QLFRELDEYDGHEDGGVCLDDLLAFLGPMNESH 232
                 689999******************998777554 PP

  == domain 4    score: 31.1 bits;  conditional E-value: 6.2e-11
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 +F+  D dg+g ld  eL+ ll++ +     +  + ++ ++fk+lDk+++G++s +E+ ++
  MMETSP1325-20131115|3028_1 272 LFDHQDADGSGELDLGELKSLLRRVLKLTASDIPDAEVGRLFKKLDKDRSGTVSVDELFAL 332
                 59999*******************99544466666688999****************9875 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   1.0         5   1.4e+04      10      16 ..     108     114 ..     108     118 .. 0.63
   2 !   13.7   0.0   1.4e-05     0.039       2      28 ..     158     184 ..     157     193 .. 0.91
   3 ?    4.5   0.0     0.013        36       5      27 ..     201     226 ..     197     232 .. 0.75
   4 !   18.6   0.0   3.7e-07     0.001       2      28 ..     269     295 ..     268     303 .. 0.90
   5 !   22.1   0.0   2.7e-08   7.4e-05       4      27 ..     311     334 ..     308     339 .. 0.91

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 5
                 ------- CS
   PF13405.1  10 DkdgdGk 16 
                 D d dG+
  MMETSP1325-20131115|3028_1 108 DLDDDGY 114
                 5666775 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 1.4e-05
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 +r++F++ D d++G +da EL++++r+
  MMETSP1325-20131115|3028_1 158 WRALFDKEDSDHSGLLDAGELKSLIRR 184
                 799********************9985 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.013
                 --GCC-.--..----B---HHHHHHH CS
   PF13405.1   5 aFklfD.kd..gdGkidaeELrdaLr 27 
                 +F+ +D +d   dG + +++L+++L 
  MMETSP1325-20131115|3028_1 201 LFRELDeYDghEDGGVCLDDLLAFLG 226
                 55555544455***********9997 PP

  == domain 4    score: 18.6 bits;  conditional E-value: 3.7e-07
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 ++++F++ D dg+G++d+ EL+++Lr+
  MMETSP1325-20131115|3028_1 269 WQALFDHQDADGSGELDLGELKSLLRR 295
                 6899*********************96 PP

  == domain 5    score: 22.1 bits;  conditional E-value: 2.7e-08
                 ---GCC-------B---HHHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                 ++Fk++Dkd++G+++ +EL ++Lr
  MMETSP1325-20131115|3028_1 311 RLFKKLDKDRSGTVSVDELFALLR 334
                 79*******************999 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.7       4.1   1.1e+04      35      41 ..     108     114 ..     108     114 .. 0.91
   2 !   13.2   0.0   1.6e-05     0.045       1      35 [.     169     206 ..     159     209 .. 0.93
   3 !    8.2   0.0    0.0006       1.6      27      53 ..     269     295 ..     259     295 .. 0.88
   4 !   27.1   0.0   7.4e-10     2e-06       2      51 ..     281     333 ..     280     334 .. 0.93

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 4.1
   PF13833.1  35 DtdgdGk 41 
                 D+d+dG+
  MMETSP1325-20131115|3028_1 108 DLDDDGY 114
                 99****8 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 1.6e-05
   PF13833.1   1 ekGlItreeLkral.allglkg..lseeevdilfrefD 35 
                 ++Gl+++ eLk+ + + l+++   ls++ev  lfre+D
  MMETSP1325-20131115|3028_1 169 HSGLLDAGELKSLIrRVLKIPPreLSDQEVMQLFRELD 206
                 589*********99888888889**************9 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.0006
   PF13833.1  27 vdilfrefDtdgdGkisfeEFcvller 53 
                  ++lf++ D+dg+G +++ E ++ll+r
  MMETSP1325-20131115|3028_1 269 WQALFDHQDADGSGELDLGELKSLLRR 295
                 589*****************9999875 PP

  == domain 4    score: 27.1 bits;  conditional E-value: 7.4e-10
   PF13833.1   2 kGlItreeLkral.allglkg..lseeevdilfrefDtdgdGkisfeEFcvll 51 
                 +G+++  eLk+ l + l+l    + + ev  lf+++D d++G +s +E  +ll
  MMETSP1325-20131115|3028_1 281 SGELDLGELKSLLrRVLKLTAsdIPDAEVGRLFKKLDKDRSGTVSVDELFALL 333
                 799**********999988889**************************99987 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.7       1.2   3.3e+03       9      14 ..     108     113 ..     108     114 .. 0.88
   2 !    6.1   0.1    0.0024       6.6       3      24 ..     160     181 ..     159     182 .. 0.88
   3 ?   -3.7   0.0       3.1   8.4e+03       4       9 ..     201     206 ..     199     206 .. 0.79
   4 !   12.0   0.1   3.4e-05     0.093       3      24 ..     271     292 ..     270     293 .. 0.87
   5 !   20.4   0.0   7.3e-08    0.0002       4      24 ..     312     332 ..     309     333 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.2
                 --S--- CS
   PF13202.1   9 DlNgDG 14 
                 Dl+ DG
  MMETSP1325-20131115|3028_1 108 DLDDDG 113
                 999999 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0024
                 HHHHHH--S----B-HHHHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkrl 24 
                 ++F++ D + +G +++ ELk l
  MMETSP1325-20131115|3028_1 160 ALFDKEDSDHSGLLDAGELKSL 181
                 678888*************987 PP

  == domain 3    score: -3.7 bits;  conditional E-value: 3.1
                 HHHHH- CS
   PF13202.1   4 tFrafD 9  
                 +Fr++D
  MMETSP1325-20131115|3028_1 201 LFRELD 206
                 699998 PP

  == domain 4    score: 12.0 bits;  conditional E-value: 3.4e-05
                 HHHHHH--S----B-HHHHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkrl 24 
                 ++F+  D++g+G ++  ELk l
  MMETSP1325-20131115|3028_1 271 ALFDHQDADGSGELDLGELKSL 292
                 678888*************987 PP

  == domain 5    score: 20.4 bits;  conditional E-value: 7.3e-08
                 HHHHH--S----B-HHHHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELkrl 24 
                 +F+++D++++G++s +EL +l
  MMETSP1325-20131115|3028_1 312 LFKKLDKDRSGTVSVDELFAL 332
                 7*****************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.56
# Mc/sec: 1442.02
//
Query:       MMETSP1325-20131115|3029_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 582.64
//
Query:       MMETSP1325-20131115|3030_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.058   12.7   0.9      0.061   12.7   0.6    1.0  1  PF01309.13 Equine arteritis virus small envelope glycoprotein


Domain annotation for each model (and alignments):
>> PF01309.13  Equine arteritis virus small envelope glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.6   4.5e-06     0.061     126     170 ..      12      54 ..       6      74 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.5e-06
  PF01309.13 126 nltgpatwvvptvgqlhfyasssifassvevlaaiillfaciplv 170
                 +lt + +    tvg+l + a+s+ +a+ + v a ++ lfa    v
  MMETSP1325-20131115|3030_1  12 QLTPSVALSSSTVGRLALAAASTALAAKLAVAAPVVTLFAES--V 54 
                 67888888899****************************953..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|3032_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 641.88
//
Query:       MMETSP1325-20131115|3025_1  [L=655]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-14   52.3   0.0    2.3e-13   50.1   0.0    2.1  1  PF08030.7  Ferric reductase NAD binding domain
    2.4e-07   31.1   0.0    4.6e-07   30.2   0.0    1.5  1  PF00175.16 Oxidoreductase NAD-binding domain
    4.8e-07   29.7   6.4    2.2e-06   27.6   4.4    2.1  1  PF01794.14 Ferric reductase like transmembrane component


Domain annotation for each model (and alignments):
>> PF08030.7  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0   5.1e-17   2.3e-13       2     145 ..     511     634 ..     510     638 .. 0.84

  Alignments for each domain:
  == domain 1    score: 50.1 bits;  conditional E-value: 5.1e-17
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF08030.7   2 envllvagGiGitpfisilkdllkksk.kealktkkikliwvvressslewfkdvLneleeeksegnieihiYlTseyeaedasdqlissiegenvdavsgtrfvkihfgRPnlkevlkdiaskhknssvgvfvCGppklvkevk 145
                 + v+l agGiG tp++si+    +k   + ++  + + liwv+r+ +   +f+    +l+e+++++n+ ++i+ T++++a+     l+s      +          +  gRPn+ e++ +      ++ vgv++CGp++++k v+
  MMETSP1325-20131115|3025_1 511 DEVILCAGGIGCTPMMSIALMAHRKKTaSGEFFYPPVRLIWVIRNLDLTVAFE---ATLAELEKSSNVTLSIFHTGNDDAGGSDLLLNSH-----I----------VKKGRPNFYELIVSK---RTDGVVGVYSCGPRSMMKAVA 634
                 789***************9877665543678999*******************...666666666799************9875544444.....2..........4789*******9888...999**************9986 PP

>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0     1e-10   4.6e-07       3     108 ..     517     634 ..     515     635 .. 0.85

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 1e-10
                 E-----HHHHHHHHHHHCCH......CCCEEEEEEEESSGG.GSTTHHHHHHHHHHSTTEEEEEECTTTTCSSSSBB--HHHHHHHCHHH.......HHHCTTTEEEEEE-HHHHHHHHH CS
  PF00175.16   3 aGGtGiaplrsvlkallede......detkvvlvyGvrtee.dlllreeleelakklpgrlkvvavsrtddgwkggkgyvtdalleelle.......eeidkeetdvyvCGppgMakavr 108
                 aGG+G +p++s++   ++++      +  +v l++  r+ +  + ++  l el+k+ + +l+++++ ++d+g  g+    + +++++  +       ++ +++ + vy CGp+ M+kav+
  MMETSP1325-20131115|3025_1 517 AGGIGCTPMMSIALMAHRKKtasgefFYPPVRLIWVIRNLDlTVAFEATLAELEKSSNVTLSIFHTGNDDAG--GSDLLLNSHIVKKGRPnfyelivSKRTDGVVGVYSCGPRSMMKAVA 634
                 9***********999887756789997789***********9999********9888768889888666666..78999999999988878887888677788999***********995 PP

>> PF01794.14  Ferric reductase like transmembrane component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   4.4   4.8e-10   2.2e-06       7     121 ..     215     325 ..     209     329 .. 0.85

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 4.8e-10
  PF01794.14   7 lllvlllllalRkrlltrltglsldslllfHkllGlaalvlallHliaflvllvrisgideqlesaaqlsdpeqllGviallvlvllvitslpslrrrlnyevFlfiHil.ayvaf 121
                  +l++++ l++++++   l+gl+ ++++ +H l G++++++ ll +++f++  +     ++       + +++++ G+++l++ v +v++slp++r r ++e+F++i ++ +++++
  MMETSP1325-20131115|3025_1 215 SMLAVQITLGTKNTFWFILSGLPQERAIKYHALHGYLMVIVHLLAILCFFIGGLT----YRPVDAPFCTCTMNPIPGIVSLVANVGIVTLSLPFVR-RKHWEWFYLIGHFnLIPIM 325
                 567777779999999889******************9998777777777776665....579999999999*************************.999*****99777566555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (655 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.01u 0.34s 00:00:01.35 Elapsed: 00:00:00.64
# Mc/sec: 2452.52
//
Query:       MMETSP1325-20131115|3033_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 897.36
//
Query:       MMETSP1325-20131115|3034_1  [L=433]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-06   26.0   6.4      0.073   12.8   0.1    5.0  6  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.073   12.0   0.1        3.2    6.6   0.1    2.5  2  PF03178.10 CPSF A subunit region
       0.15   10.4   0.0       0.22    9.8   0.0    1.2  1  PF04841.8  Vps16, N-terminal region


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.33   1.5e+03      19      39 .]      18      37 ..      11      37 .. 0.78
   2 ?   -2.0   0.2      0.77   3.5e+03      34      39 .]      80      85 ..      79      85 .. 0.84
   3 !    8.7   0.0   0.00032       1.5       6      35 ..     176     205 ..     172     206 .. 0.91
   4 ?    0.4   0.0      0.13     6e+02       1      14 [.     203     216 ..     203     217 .. 0.85
   5 !   12.8   0.1   1.6e-05     0.073      14      38 ..     229     253 ..     226     254 .. 0.93
   6 ?    2.7   0.0     0.025   1.1e+02      17      34 ..     332     349 ..     328     350 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.33
                EESSSTEEEEEETTSEEEEEE CS
  PF00400.27 19 fspdgpllasgSrDgtirlWd 39
                f++d + ++ ++ D+  r+++
  MMETSP1325-20131115|3034_1 18 FNQD-HGCFACGMDNGFRIYN 37
                5666.6677899999999885 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.77
                EEEEEE CS
  PF00400.27 34 tirlWd 39
                 +++Wd
  MMETSP1325-20131115|3034_1 80 IVKIWD 85
                69***9 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.00032
                 EEESSSSSEEEEEEESSSTEEEEEETTSEE CS
  PF00400.27   6 tlrgHtspVtcvafspdgpllasgSrDgti 35 
                 ++ +H+s    +a + dg++la++S+ gt+
  MMETSP1325-20131115|3034_1 176 IIPAHESELAQIALNLDGTRLATASDKGTL 205
                 6789**********************9996 PP

  == domain 4    score: 0.4 bits;  conditional E-value: 0.13
                 TEEEEEEESSSSSE CS
  PF00400.27   1 geckatlrgHtspV 14 
                 g+++++++ Ht+ +
  MMETSP1325-20131115|3034_1 203 GTLIRVFDTHTGDI 216
                 57899******987 PP

  == domain 5    score: 12.8 bits;  conditional E-value: 1.6e-05
                 EEEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  14 VtcvafspdgpllasgSrDgtirlW 38 
                 + cv f+ ++ +la++S+ gt++++
  MMETSP1325-20131115|3034_1 229 IHCVTFNKTSDFLACSSDKGTVHIF 253
                 89*********************96 PP

  == domain 6    score: 2.7 bits;  conditional E-value: 0.025
                 EEEESSSTEEEEEETTSE CS
  PF00400.27  17 vafspdgpllasgSrDgt 34 
                 +af +d++ l+  S+Dg+
  MMETSP1325-20131115|3034_1 332 CAFGQDPRTLIVVSADGS 349
                 8999************96 PP

>> PF03178.10  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1   0.00071       3.2      79     127 ..      89     136 ..      79     272 .. 0.79
   2 ?   -2.1   0.0      0.31   1.4e+03     149     169 ..     327     347 ..     325     351 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00071
  PF03178.10  79 lklvhktevkgavtalsefqgrllvaigqklrvydlgkdksllpkafld 127
                  + + +  ++ +v a++  ++r++v +  k++vy++ + k ll + ++ 
  MMETSP1325-20131115|3034_1  89 NRAIGELMFRSEVKAVKLRRDRVVVVLLHKIYVYRFSDLK-LLDQISTL 136
                 5567788888999999999999999999999999998888.77665554 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.31
  PF03178.10 149 kSvtfleydeenkklilfakd 169
                 +S+t++ + +++++li+++ d
  MMETSP1325-20131115|3034_1 327 ESTTICAFGQDPRTLIVVSAD 347
                 899999999999999999987 PP

>> PF04841.8  Vps16, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   4.9e-05      0.22      43     137 ..     187     285 ..     179     312 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 4.9e-05
   PF04841.8  43 iAvtrspsklepaadarPvyiqiysl.sGrlLkkll..wnkeklvklgwseeee.LivvqkagavlvygllGek..sfsigeevesvkvrecrifatsage 137
                 iA++ + ++l  a+d+    i+++++ +G +Lk+l   +++  +  + +++    L + +++g+v+++ l G+k  + s g   +++   ++   + sa e
  MMETSP1325-20131115|3034_1 187 IALNLDGTRLATASDKGTL-IRVFDThTGDILKELRrgMDRAVIHCVTFNKTSDfLACSSDKGTVHIFAL-GDKnaQASQGTLPQNSAGADAAAQQGSAAE 285
                 99*********99777777.****8648******9733565666678999876626688999******99.999777777766677777777666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 1820.39
//
Query:       MMETSP1325-20131115|3038_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|3039_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.039   13.8   0.3      0.047   13.5   0.2    1.1  1  PF09483.5 Type III secretion protein (HpaP)


Domain annotation for each model (and alignments):
>> PF09483.5  Type III secretion protein (HpaP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   3.4e-06     0.047      22      78 ..      26      84 ..      10     104 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.4e-06
   PF09483.5 22 raaraapagtpaPpep.gadvedesterpedapappapPraqdgeedpqaeaDa.gaea 78
                +aa   p + p P +  +     ++t++p +ap++p+pP + dg+++ q++ ++  + +
  MMETSP1325-20131115|3039_1 26 AAAGIDPSTIPSPTGAlASFWFINATHNPLPAPMAPPPPDCLDGTAEGQPDLGNaTDYK 84
                556666777777777754445568899***********************999844444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 773.82
//
Query:       MMETSP1325-20131115|3036_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.095   13.1   2.2       0.28   11.6   1.5    1.8  1  PF14086.1 Domain of unknown function (DUF4266)


Domain annotation for each model (and alignments):
>> PF14086.1  Domain of unknown function (DUF4266)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.5     2e-05      0.28      28      48 ..      97     118 ..      82     119 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2e-05
   PF14086.1  28 hvyfsrEga.sgggGkaGGGCG 48 
                   y+ r+++  g+gG +GGG G
  MMETSP1325-20131115|3036_1  97 SDYSIRQASlNGNGGGGGGGGG 118
                 34779****9888888888866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.56
# Mc/sec: 1013.20
//
Query:       MMETSP1325-20131115|3037_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       822  (0.0601229); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 1092.74
//
Query:       MMETSP1325-20131115|3041_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.47    9.6   4.8       0.61    9.2   3.3    1.1  1  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.3   4.4e-05      0.61     163     199 .]      13      43 ..       3      43 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 4.4e-05
                 XXXXX.....XXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  PF00520.26 163 dlmyatlragskigyiyfvifiilgsflllnlliavi 199
                  +       g+++  +yf  f+i+g+ ++ln+ +a i
  MMETSP1325-20131115|3041_1  13 AV------TGTVWTRLYFYAFYIIGVSIILNVAVAFI 43 
                 33......4589**********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       683  (0.0499561); expected 273.4 (0.02)
Passed bias filter:                      546  (0.0399356); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 552.63
//
Query:       MMETSP1325-20131115|3042_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 797.25
//
Query:       MMETSP1325-20131115|3045_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|3043_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-22   77.5   0.0    7.3e-22   77.1   0.0    1.2  1  PF00125.19 Core histone H2A/H2B/H3/H4
    0.00045   20.0   0.0    0.00064   19.6   0.0    1.2  1  PF00808.18 Histone-like transcription factor (CBF/NF-Y) and archaeal histone


Domain annotation for each model (and alignments):
>> PF00125.19  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   0.0   1.1e-25   7.3e-22       1      75 []      27     101 ..      27     101 .. 0.98

  Alignments for each domain:
  == domain 1    score: 77.1 bits;  conditional E-value: 1.1e-25
  PF00125.19   1 ssdllilklpvsRvvrelkegfyaelrisaealvalqealedlleeiledAgllaehakrktitprdiqlAvrld 75 
                 +s++++l++pv+R++r lk++   ++r++a+a v+ ++ le+l++e+le+Ag+++++ k k+itpr++qlA+r d
  MMETSP1325-20131115|3043_1  27 RSSRAGLQFPVGRIHRFLKNRINIGQRVGATAAVYAAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGD 101
                 789*********************************************************************975 PP

>> PF00808.18  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   9.4e-08   0.00064       2      65 .]      34      98 ..      33      98 .. 0.94

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 9.4e-08
                ---HHHHHHHHHHH.TT--.B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH CS
  PF00808.18  2 eLPiarvkkImksd.pdarkiskdAkeliaecveefieelaseAaeickkekrKTikaediklav 65
                ++P  r+ + +k+  +  +++   A ++ a ++e    e+++ A   ck+ k K i++ +++la+
  MMETSP1325-20131115|3043_1 34 QFPVGRIHRFLKNRiNIGQRVGATAAVYAAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAI 98
                69************655666******************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 619.44
//
Query:       MMETSP1325-20131115|3044_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.44s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|3046_1  [L=319]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-29  101.5   0.0    5.6e-29  101.1   0.0    1.1  1  PF01182.15 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase


Domain annotation for each model (and alignments):
>> PF01182.15  Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.1   0.0   4.1e-33   5.6e-29       1     195 [.      75     281 ..      75     285 .. 0.88

  Alignments for each domain:
  == domain 1    score: 101.1 bits;  conditional E-value: 4.1e-33
                 HHHHHHHHHHHHHHHHHTTSS-EEEEE----TTHHHHHHHHCS-T..S-GGGEEEEESEEESS-TTSTT-HHHHHHHHTGGG-EE-CCCC-........HHHHHHHHHHHHHCCHTSS.........................-SEEEE-------BTTB-TT-CCHHH.SS-SEEEE-..STTSS.EEEE-HHHHTTSSEEEEEE---CCHHHHH CS
  PF01182.15   1 laealaariaealeeaiaergraslalsGGstpkalyealaeeesaaidwsrvhvflgDERfVpaddpdsneklareaLlskvkipeanvhrmpaesddpeeaaaayeeelrallgaee.....................vpvfDlvlLGmGeDGHtASLFPgspelleekdrlvvavndspkpppeRitltlpalnsarevvflvaGeeKaeale 195
                 lae++ + +a+a+++ i+e+g +s+ +  G+t k+l ++ ++e   +id+s+vhvf+g+ER    +d++       +a+l+   +p++nvh  p   ddp+++a++y+e l  + ++                       +pv+DlvlLG G+DGHtASL+Pgs+++l++ +  v +v   p  ++  +t+t+ +++sa +v++ +  +e  e+++
  MMETSP1325-20131115|3046_1  75 LAEHIVSTVAHAARTNIEEKGGFSISIGSGTTVKPLARLKEHEP--SIDFSKVHVFFGNERT--SGDAAGKCLNGAQAWLDACGVPPSNVHSPPF-GDDPAASAEQYTELLLGMPEN-VvgrtirggkvmgngmvtggtdMPVLDLVLLGSGADGHTASLYPGSKQVLASYEG-VNVVV--PADKKGGVTFTIDTISSAARVLLSAGKAEQSEMVA 281
                 68899999****************************99998755..6**************6..8899999999999****99********7773.689************988754.2699********************************************9965443.33333..4444457***************9999888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.43s 00:00:00.92 Elapsed: 00:00:00.61
# Mc/sec: 1253.18
//
Query:       MMETSP1325-20131115|3047_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-18   63.7   0.0    1.1e-17   63.5   0.0    1.0  1  PF01039.17 Carboxyl transferase domain


Domain annotation for each model (and alignments):
>> PF01039.17  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   7.8e-22   1.1e-17     382     485 ..       2     109 ..       1     115 [. 0.93

  Alignments for each domain:
  == domain 1    score: 63.5 bits;  conditional E-value: 7.8e-22
                 -CGGGTGCCGTT.CEEETTT-EE--------HHHHTHHHHHCCCHHH.....HCHHHHHHHHHHHHHHHHTTCHHHHHHHHHCCCSSHHHHHHHHHHCCCCGGGGHHHH CS
  PF01039.17 382 ayvvmdskilgadavaawptariaVlgpegaveilfrkekaaaemer.....kelealkkkklaeyeeellnpyvaaargfaDavidpsetraklvialellwkksrkf 485
                 +++ m++++ +++++++wp++ri+V+g+e+a+++l + +  + e+++     + ++++k+  l +ye e +  y++ ar ++D vi+p++tr++l +a +++  +++  
  MMETSP1325-20131115|3047_1   2 GNYGMCGRAFSPRFLFMWPNSRISVMGGEQAAGVLATVHGDNLERRGeeftpEAEAEFKAPILSKYETE-SSCYYSSARLWDDGVIEPAKTRETLGLAFAAALXAPVAT 109
                 689**************************************99999999998888888***********.*****************************9998888744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 692.28
//
Query:       MMETSP1325-20131115|3048_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 349.87
//
Query:       MMETSP1325-20131115|3050_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-05   23.4   0.0    3.2e-05   23.1   0.0    1.1  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   2.4e-09   3.2e-05      29      91 ..     141     211 ..     118     213 .] 0.77

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 2.4e-09
                 T-......----T.........THHHHHHH-------TTT--------B-HHHHHHHT.T----CCHHHTT- CS
  PF00632.20  29 plsrdsdleessn.........dnlklfkflGkligkaiyegilldlpfsraflkflllgkkvtledleeid 91 
                 +l+++++l++++          ++l+   flGkl+g+a  ++ +++l+++ +++k l+ g +v+ +dl+ +d
  MMETSP1325-20131115|3050_1 141 NLTQANSLNKDKFvfdtdnlnvARLRDVCFLGKLVGLACRHSLMVPLNLPSLVWKPLV-GLPVDRKDLRAVD 211
                 44444444443335555444444455589*****************************.**********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 963.06
//
Query:       MMETSP1325-20131115|3051_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.35s 00:00:00.62 Elapsed: 00:00:00.48
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|3052_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-16   58.8   0.1    4.9e-16   58.2   0.1    1.3  1  PF04564.10 U-box domain
    0.00027   20.3   0.0    0.00044   19.6   0.0    1.4  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
     0.0021   17.4   0.0     0.0043   16.4   0.0    1.5  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit


Domain annotation for each model (and alignments):
>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.1   1.1e-19   4.9e-16       2      71 ..     116     186 ..     115     188 .. 0.91

  Alignments for each domain:
  == domain 1    score: 58.2 bits;  conditional E-value: 1.1e-19
                 -GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT...SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHHC CS
  PF04564.10   2 PdefldpitlelmkdPvilPsgitvDrstiekhlls..rdktdPftreplteeelipnlelKekIdkfleek 71 
                 P ef +p+tl +m dPvi+++g+t+Dr++ie++ +   +  ++P t ep+t+ el pn  +Ke+I+++ ++k
  MMETSP1325-20131115|3052_1 116 PWEFECPLTLDVMDDPVIAADGVTYDRAAIEEWFETtkEVLVSPTTLEPMTK-ELRPNFRMKEEIKAYKKAK 186
                 779*******************************99445668********96.7**************9876 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   9.7e-08   0.00044       9      46 ..     117     151 ..     110     175 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 9.7e-08
                 XX-B-TTT-S.-SS....EEEES---EEEHHHHHHHHHH CS
   PF13445.1   9 sifaCpiske.qsteqnpPvvLpCGhvisrealeklakg 46 
                   f Cp + + + +    Pv+   G +++r a+e+++++
  MMETSP1325-20131115|3052_1 117 WEFECPLTLDvMDD----PVIAADGVTYDRAAIEEWFET 151
                 579*********88....******************994 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   9.5e-07    0.0043      11      48 ..     118     154 ..     110     167 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 9.5e-07
                 X-B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT-- CS
   PF11789.3  11 slkCpltlkpfkePvtskkCnHvFEkeaIlkmlkrkkk 48 
                 + +Cpltl+++ +Pv+      ++++ aI++ ++++k+
  MMETSP1325-20131115|3052_1 118 EFECPLTLDVMDDPVIAAD-GVTYDRAAIEEWFETTKE 154
                 679*************987.559*******99977765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 924.99
//
Query:       MMETSP1325-20131115|3053_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-20   73.2   3.0      1e-20   73.2   2.1    1.9  2  PF13422.1  Domain of unknown function (DUF4110)
  ------ inclusion threshold ------
       0.05   13.6   3.7       0.14   12.1   1.0    2.3  2  PF02827.11 cAMP-dependent protein kinase inhibitor
      0.052   12.9   0.0       0.12   11.8   0.0    1.5  1  PF14401.1  RimK-like ATPgrasp N-terminal domain
        0.1   13.2   0.6        0.1   13.2   0.4    2.1  2  PF13565.1  Homeodomain-like domain
       0.89    9.6   3.4       0.78    9.7   0.3    2.0  2  PF14138.1  Cytochrome c oxidase assembly protein COX16


Domain annotation for each model (and alignments):
>> PF13422.1  Domain of unknown function (DUF4110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.3      0.48   1.3e+03      77      86 ..      33      42 ..       8      60 .. 0.54
   2 !   73.2   2.1   3.7e-24     1e-20       3      79 ..      64     143 ..      62     159 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.48
   PF13422.1 77 geeeevsetk 86
                +  +e s +k
  MMETSP1325-20131115|3053_1 33 ESADEASPQK 42
                2222222222 PP

  == domain 2    score: 73.2 bits;  conditional E-value: 3.7e-24
   PF13422.1   3 lglsdslptPkpgEslrdFyaRTsaeWqeaaiestqda...ksgKelkkdafdlAeerykelkeileeleeleeeqkgee 79 
                 l+++d+  tP ++E lr+F++RT ++W  +a+++ +++    ++Kel+++af lAe+ry+ l++ l++l+ele++q + e
  MMETSP1325-20131115|3053_1  64 LRVDDAMTTPLANEALREFFSRTATHWAALAVKEAAETeesLDEKELRRKAFLLAEARYETLRPTLRRLNELERAQREGE 143
                 7899*****************************99988889******************************999965544 PP

>> PF02827.11  cAMP-dependent protein kinase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.0   5.2e-05      0.14      31      65 ..      12      46 ..       6      56 .. 0.80
   2 ?    0.8   0.0      0.17   4.7e+02      38      61 ..      87     109 ..      81     115 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.2e-05
  PF02827.11 31 vggsseLalklaeLdvekeegeekgeesaseqsek 65
                +++ seLa   a +dv+ e+ge+ +e s+++  ++
  MMETSP1325-20131115|3053_1 12 AQNESELASAAASMDVSDEDGESADEASPQKRRNR 46
                45679*****************9999888876554 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.17
  PF02827.11  38 alklaeLdvekeegeekgeesase 61 
                 a   a+L+v ke +e++++  ++e
  MMETSP1325-20131115|3053_1  87 ATHWAALAV-KEAAETEESLDEKE 109
                 556789999.77777765555544 PP

>> PF14401.1  RimK-like ATPgrasp N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.2e-05      0.12      36      70 ..     116     150 ..     114     163 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.2e-05
   PF14401.1  36 llaearghkviPsvetildlsrkslygialeelek 70 
                 llaear +   P+++ +++l+r++  g+ ++e  +
  MMETSP1325-20131115|3053_1 116 LLAEARYETLRPTLRRLNELERAQREGEGTAEPRA 150
                 9***********************99998887655 PP

>> PF13565.1  Homeodomain-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.4   3.8e-05       0.1      11      64 ..      30      85 ..      28      91 .. 0.69
   2 ?   -0.5   0.4      0.72     2e+03       6      13 ..     135     142 ..      96     164 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.8e-05
   PF13565.1 11 egGlagLkd..rkdrprpgrprk...deeeeaelikllleeprwtpreiaeaLaeefgi 64
                e+G+++ ++   k+r  + r+ +    ee+ +el + l+ +  +t+ +  eaL+e f +
  MMETSP1325-20131115|3053_1 30 EDGESADEAspQKRRN-RKRR-TmsvREEI-RELQARLRVDDAMTTPLANEALREFFSR 85
                7899888886432333.3333.23444555.888888888889***********97755 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.72
   PF13565.1   6 lkryregG 13 
                 l+r++++G
  MMETSP1325-20131115|3053_1 135 LERAQREG 142
                 34444444 PP

>> PF14138.1  Cytochrome c oxidase assembly protein COX16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.3   0.00029      0.78      25      66 ..      24      67 ..      19      72 .. 0.77
   2 ?    0.1   0.1      0.28   7.8e+02      37      61 ..     100     126 ..      85     144 .. 0.53

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00029
   PF14138.1 25 ryerrdekvkqleeeealkll.kkrrkvdleeeyyklqak.dld 66
                + +++de  ++ +e   +k + +krr+++++ee ++lqa    d
  MMETSP1325-20131115|3053_1 24 SMDVSDEDGESADEASPQKRRnRKRRTMSVREEIRELQARlRVD 67
                5678888888887777777775677778**********985555 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.28
   PF14138.1  37 eeeealkllkkrrkv.dleee.yyklq 61 
                 e ee l+ ++ rrk   l e  y++l 
  MMETSP1325-20131115|3053_1 100 ETEESLDEKELRRKAfLLAEArYETLR 126
                 344444444333333233332355554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       979  (0.0716062); expected 273.4 (0.02)
Passed bias filter:                      561  (0.0410328); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.42s 00:00:00.89 Elapsed: 00:00:00.65
# Mc/sec: 615.68
//
Query:       MMETSP1325-20131115|3054_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 693.95
//
Query:       MMETSP1325-20131115|3056_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|3058_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.29   11.3   6.0       0.58   10.3   4.2    1.5  1  PF08232.7 Striatin family
       0.57   10.1   4.0        2.2    8.1   1.0    2.0  2  PF11068.3 Protein of unknown function (DUF2869)


Domain annotation for each model (and alignments):
>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.2   8.4e-05      0.58      39     115 ..       8      83 ..       7      97 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 8.4e-05
   PF08232.7  39 GerrglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaeeeeleekkdeesessakdekelkksr 115
                 G rr+l+   e   +rv  Lekal + rak ++  +++++++ + +++++   + + ++d  +e s++++ ++ ++r
  MMETSP1325-20131115|3058_1   8 GVRRKLRDRAEAAETRVAELEKALFKMRAKAEAEAEAAAAKE-RVEQKENRRPAANGGADGVTEPSKDKKIQMLEAR 83 
                 6689999999999****************9988544444442.2222222223333333333444444444444444 PP

>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   1.0   0.00032       2.2      22      72 ..      10      58 ..       8      62 .. 0.86
   2 ?    2.4   0.0      0.02   1.4e+02      13      32 ..      68      87 ..      66      96 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00032
   PF11068.3 22 qeelqeqleqleqelqqLefqkkkalkeikkqsaqqieeiqqqvekekakr 72
                +++l+++ e++e+ +++Le+   k+ ++++ +  ++ ++++++ve++ ++r
  MMETSP1325-20131115|3058_1 10 RRKLRDRAEAAETRVAELEKALFKMRAKAEAE--AEAAAAKERVEQKENRR 58
                6789999***************9999998855..78899999999998877 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.02
   PF11068.3 13 vTeksKeelqeelqeqleql 32
                vTe sK++  + l++++++l
  MMETSP1325-20131115|3058_1 68 VTEPSKDKKIQMLEARVRNL 87
                89999999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1251  (0.0915009); expected 273.4 (0.02)
Passed bias filter:                      791  (0.0578555); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.44s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 474.48
//
Query:       MMETSP1325-20131115|3057_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 764.79
//
Query:       MMETSP1325-20131115|3059_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 484.16
//
Query:       MMETSP1325-20131115|3049_1  [L=611]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-70  237.8   0.0    3.8e-70  236.1   0.0    1.8  1  PF00225.18 Kinesin motor domain
     0.0016   18.0   0.6     0.0049   16.4   0.4    1.8  1  PF12937.2  F-box-like
     0.0073   16.3   0.1      0.017   15.1   0.0    1.6  1  PF05418.6  Apovitellenin I (Apo-VLDL-II)
  ------ inclusion threshold ------
      0.087   12.5   0.2       0.71    9.5   0.0    2.1  2  PF03153.8  Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.1   0.0   1.1e-73   3.8e-70      38     334 ..      22     389 ..       8     390 .. 0.86

  Alignments for each domain:
  == domain 1    score: 236.1 bits;  conditional E-value: 1.1e-73
                 CTEEEEEESEEEETTS-HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-..TTTTC---HHHHHHHHHHHHHCCTTTH...............................TEEEEEEEEEEEEETTEEEETTSTTT...........................TS-SS.....BEEEECTTTCCEEECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.............---H-SHHHHHHHHHHHHHHHHHHHHHHT....TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCT CS
  PF00225.18  38 ekekeftFdkvfdeeatqeevyeelakplvesvleGynvtifaYGqtgsGKTytmeGk.eeeeekGiipraleelFeeieeekeek...............................ekefsvkvsylEiYnekiyDLLesek...........................ekkkk....klkiredskkgkvyvkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktga............aeerrlkEaanINkSLlaLgrvIsaLaen...kkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakn 334
                 + ++ef+F+ +++++a+q++v+e+++ pl+++v++G n+ ++aYGqtgsGKT+tm G+ +++e++Gi++r+++++Fe+i++++                                  + ++ v++s +E+Y+e+++D L +++                           +   +     + + +  +     + +   v+v++a ++++l++++ +nr++a t +n++SSRSHa + +++++++ ++++e e+++ ++l LvDLAGsE  + t a            + ++r+ E+++IN+SLlaL++vI+  ++    ++++   YR+Sk+T+lL+++L+ + +t+++++vs +s+++++tl tL+f++ a++
  MMETSP1325-20131115|3049_1  22 NVTQEFSFNGILGPQASQQQVFEQVGPPLIDAVMNGTNAACLAYGQTGSGKTFTMAGNgSRREQAGIAYRCVSDVFERIATNTRAVvgvgedgvsggggqnedgaaatvesmaaeqpTDRYVVSLSAVEVYMETVRDILVPRHklrcpaaydrtletrgrfdsnatshdpA---RcacgGM-VLRTVE---ERIPQAAVVPVTDAATAHRLIHSALRNRRTAPTPWNDASSRSHAFILVKVKHETLDASGEAETSTEATLTLVDLAGSESSRTTMAksvddlseitaqQMRQRQLEGQAINTSLLALRKVIQVCSRPedeREERAPVYRESKVTMLLKKALSSDGRTSVVLNVSQHSNDAHHTLPTLQFGAAASK 389
                 6789*****************************************************9877889***************98665559999999999999888888888888777777699*********************99***************9999876653321...1333222.333333...35999***************************************************999987889*************87665433233333333234467789*******************9998866666667*******************************************99987 PP

>> PF12937.2  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.4   1.4e-06    0.0049       8      42 ..     479     514 ..     477     517 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.4e-06
                 HHHHHHTTS-HHHHHHH----HHHHHHHHT-.HHHH CS
   PF12937.2   8 iLlqIFsyLppsdLlrlalVCrrWrrvaldt.lLWr 42 
                 + +++  +L p ++l++  V+r+W+r++++t +LW 
  MMETSP1325-20131115|3049_1 479 VVVEVCMFLKPFEILACVEVSRYWARAINTTeRLWA 514
                 56677778977789*********************6 PP

>> PF05418.6  Apovitellenin I (Apo-VLDL-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     5e-06     0.017      18      79 ..     498     559 ..     492     562 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 5e-06
   PF05418.6  18 vaayiyeavnkvspragqflvdvsqttvvsGtrnlliretakltilaeqlvekikslwntkv 79 
                 v+ y   a+n+     +  l d++q +v +   +l   +t+k+ +l + +ve ++s w  kv
  MMETSP1325-20131115|3049_1 498 VSRYWARAINTTERLWACVLGDAAQAAVSAREAELSTGKTSKVQVLRDSVVEDLRSQWREKV 559
                 566778899999999999************9****************************998 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.2      0.12   4.1e+02     142     159 ..     300     317 ..     188     441 .. 0.51
   2 ?    9.5   0.0   0.00021      0.71      25      54 ..     545     574 ..     543     599 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.12
                 XXXXXXXXXXXXXXXXXX CS
   PF03153.8 142 aaqqlqqslgapassqas 159
                  aqq++q++++ ++ ++s
  MMETSP1325-20131115|3049_1 300 TAQQMRQRQLEGQAINTS 317
                 222222222222222222 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00021
                 HHHHHHHHHHHHHHHXXXXXXXXXXXXXXX CS
   PF03153.8  25 eqvLqdLkklWekKLlqskvaefpwdeepq 54 
                 ++v++dL+  W++K+ +++++++  + +++
  MMETSP1325-20131115|3049_1 545 DSVVEDLRSQWREKVAEAGALRDESNAAQS 574
                 689******************999986654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.01u 0.39s 00:00:01.40 Elapsed: 00:00:00.59
# Mc/sec: 2481.65
//
Query:       MMETSP1325-20131115|3062_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        75  (0.00548566); expected 273.4 (0.02)
Passed bias filter:                       74  (0.00541252); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 256.45
//
Query:       MMETSP1325-20131115|3060_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-19   69.0   0.0    2.4e-19   68.5   0.0    1.3  1  PF02134.16 Repeat in ubiquitin-activating (UBA) protein
  ------ inclusion threshold ------
      0.027   14.2   0.7      0.064   13.0   0.5    1.7  1  PF12454.3  GPI-anchored cell wall organization protein


Domain annotation for each model (and alignments):
>> PF02134.16  Repeat in ubiquitin-activating (UBA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   0.0   3.6e-23   2.4e-19       2      66 ..      43     107 ..      42     108 .. 0.97

  Alignments for each domain:
  == domain 1    score: 68.5 bits;  conditional E-value: 3.6e-23
  PF02134.16   2 fdkddddhvdfvaaaanlRaenfgikeksrnevkqiagnIIPaiattnAivaaivvlelikvleg 66 
                  dkd  +h+ ++ + a +Ra  f+i+ +++ ++ + ++nIIPa+a+tnA++aa++v e+ kvl+ 
  MMETSP1325-20131115|3060_1  43 VDKDLREHMVWIHERASERAALFKIDGLTYDKTLGSVKNIIPAVASTNAVIAAACVHEATKVLSY 107
                 59***********************99***********************************986 PP

>> PF12454.3  GPI-anchored cell wall organization protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.5   9.4e-06     0.064       3      27 ..      78     102 ..      76     106 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 9.4e-06
   PF12454.3   3 flKyllPALaaagaaaAassCk.ggt 27 
                  +K ++PA+a  +a+ Aa  C   +t
  MMETSP1325-20131115|3060_1  78 SVKNIIPAVASTNAVIAA-ACVhEAT 102
                 58****************.9984444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.34s 00:00:00.89 Elapsed: 00:00:00.70
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|3065_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.089   11.2   4.0       0.31    9.4   0.4    2.0  2  PF01204.13 Trehalase


Domain annotation for each model (and alignments):
>> PF01204.13  Trehalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1    0.0012        17     103     125 ..       4      26 ..       2      29 .. 0.83
   2 ?    9.4   0.4   2.3e-05      0.31     482     509 ..      31      57 ..      27      60 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0012
  PF01204.13 103 klkpeassllpvpkpfvvPGgRF 125
                 +++p +  ++ +p p+ vPG RF
  MMETSP1325-20131115|3065_1   4 SSRPIDPYMIFNPDPVHVPGERF 26 
                 566777789999*********** PP

  == domain 2    score: 9.4 bits;  conditional E-value: 2.3e-05
  PF01204.13 482 aeygggggeyvvqeGFGWtNgvvlelLe 509
                 + y g+g ey  ++G+GW  g vl+ ++
  MMETSP1325-20131115|3065_1  31 GTY-GSGDEYCTKTGYGWGRGYVLNTIK 57 
                 444.599**************9999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.63
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|3066_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 518.40
//
Query:       MMETSP1325-20131115|3067_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|3063_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2101  (0.153672); expected 273.4 (0.02)
Passed bias filter:                      525  (0.0383996); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.40s 00:00:01.16 Elapsed: 00:00:00.59
# Mc/sec: 1039.78
//
Query:       MMETSP1325-20131115|3071_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.62
# Mc/sec: 278.29
//
Query:       MMETSP1325-20131115|3070_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.2   10.3   5.6       0.37    9.4   0.4    2.0  2  PF01057.12 Parvovirus non-structural protein NS1


Domain annotation for each model (and alignments):
>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.4    0.0013        18      41      91 ..       9      56 ..       4      64 .. 0.82
   2 ?    9.4   0.4   2.7e-05      0.37      10      86 ..      67     137 ..      57     138 .] 0.83

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0013
  PF01057.12 41 sragrrqienaleqakirmfstkaaldilakkevtadfdieenriykllsl 91
                + ++rr+ e+a ++a+ +  +++a +d l ++e      +e+nr y++  +
  MMETSP1325-20131115|3070_1  9 KAERRRRSETAAHMADEEQRRRMAEIDTLRSEEDR---IREQNRSYAIQAA 56
                45567779*********************999888...8888888887655 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 2.7e-05
  PF01057.12  10 knlveelvekgivteedWaaidsesYlrlsrsragrrqienaleqakirmfstkaaldilakkevt.adfdieenriy 86 
                 + l+e+      v +++Wa+++         +++ rr +e+ +++++ + + t++  d++a+ e+  a + + +n ++
  MMETSP1325-20131115|3070_1  67 EGLYEAAAASERVQRQEWASRQ-------LEEEHMRRALEREEQLNQMHAVLTRNIHDYVAHRETSmAPRRRLRNHLV 137
                 5678888888889999999999.......667777778**************************99777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1164  (0.0851375); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 635.96
//
Query:       MMETSP1325-20131115|3072_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-30  104.8   0.6    2.6e-30  104.6   0.4    1.0  1  PF04061.9 ORMDL family


Domain annotation for each model (and alignments):
>> PF04061.9  ORMDL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.6   0.4   1.9e-34   2.6e-30      41     136 .]       1      95 [.       1      95 [. 0.98

  Alignments for each domain:
  == domain 1    score: 104.6 bits;  conditional E-value: 1.9e-34
   PF04061.9  41 ltnlvyvlvsyvllHwvkGtPfetedqGaydnltlWEQidegeqltparkfLlvvPivlfllsthytkyelelflinvivllvvvipKlpilhkvr 136
                 +t ++++++++  lHw+kG+P  + dqG+++ lt WEQ+d ge++t ++kfL++vP+vl+ll+ + ++y+   ++in+ ++l+++i+K+p++h+vr
  MMETSP1325-20131115|3072_1   1 MTSVIHFVLTFSALHWIKGSPDFY-DQGTFNGLTAWEQLDGGEHYTFTKKFLMLVPTVLTLLTLYNAEYSRDALMINIPLWLLLMIAKMPSMHRVR 95 
                 5899*****************877.*********************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 589.10
//
Query:       MMETSP1325-20131115|3068_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.53
# Mc/sec: 1424.25
//
Query:       MMETSP1325-20131115|3074_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-32  107.0  19.4      5e-09   34.7   0.1    4.2  4  PF00036.27 EF hand
    1.1e-28   99.0   7.2    2.3e-14   53.1   0.3    2.1  2  PF13499.1  EF-hand domain pair
    1.2e-26   90.0   8.1    4.7e-09   35.2   0.1    4.3  4  PF13405.1  EF-hand domain
    2.5e-20   71.7  14.5    8.4e-10   38.0   1.3    3.8  4  PF13833.1  EF-hand domain pair
    2.2e-18   64.5  12.7    3.2e-06   26.1   0.1    4.3  4  PF13202.1  EF hand
    8.7e-08   31.7   3.9     0.0016   18.0   0.3    2.2  2  PF12763.2  Cytoskeletal-regulatory complex EF hand
    4.7e-05   23.2   0.9      0.032   14.1   0.2    2.1  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
    0.00064   19.9   0.1      0.065   13.5   0.0    2.5  2  PF11829.3  Protein of unknown function (DUF3349)
     0.0062   16.3   4.3      0.014   15.2   0.4    2.5  2  PF08726.5  Ca2+ insensitive EF hand
     0.0072   15.8   0.0       0.42   10.1   0.0    2.5  2  PF03672.8  Uncharacterised protein family (UPF0154)
  ------ inclusion threshold ------
      0.022   14.3   1.3       0.12   12.0   0.9    1.9  1  PF00210.19 Ferritin-like domain
      0.039   13.8   1.3       0.89    9.4   0.1    2.2  2  PF03874.11 RNA polymerase Rpb4
      0.051   13.2   0.2      0.085   12.5   0.1    1.4  1  PF09033.5  DNA Fragmentation factor 45kDa, C terminal domain
       0.07   12.9   1.1        1.3    8.9   0.2    2.4  2  PF11455.3  Protein  of unknown function (DUF3018)
       0.72    9.8   4.0        6.1    6.9   0.3    2.3  2  PF12363.3  Phage protein


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.1   5.4e-12     5e-09       1      29 []      18      46 ..      18      46 .. 0.96
   2 !   33.2   0.6   1.6e-11   1.4e-08       1      28 [.      54      81 ..      54      82 .. 0.95
   3 !   16.1   0.0   4.9e-06    0.0044       1      28 [.      92     119 ..      92     120 .. 0.91
   4 !   31.6   3.6   5.2e-11   4.7e-08       1      28 [.     128     155 ..     128     156 .] 0.96

  Alignments for each domain:
  == domain 1    score: 34.7 bits;  conditional E-value: 5.4e-12
                HHHHHHHHHCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkkl 29
                e+keaF +fDkDg+G Is +E+ +++k+l
  MMETSP1325-20131115|3074_1 18 EFKEAFTLFDKDGSGAISIDELAQVMKSL 46
                79************************986 PP

  == domain 2    score: 33.2 bits;  conditional E-value: 1.6e-11
                HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkk 28
                el e+++e+D Dg+G I+f+Ef++++++
  MMETSP1325-20131115|3074_1 54 ELLEMIQEVDDDGSGEIDFQEFLTMMAN 81
                789***********************85 PP

  == domain 3    score: 16.1 bits;  conditional E-value: 4.9e-06
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkk 28 
                 e+++ F++fD  g+G I  +++ +++++
  MMETSP1325-20131115|3074_1  92 EMMKCFRVFDSEGTGCIPRDDLHQIIAT 119
                 67899*****************999876 PP

  == domain 4    score: 31.6 bits;  conditional E-value: 5.2e-11
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkk 28 
                 e+ke+++ +DkDgdG I++eEf++++++
  MMETSP1325-20131115|3074_1 128 EIKEFIDDADKDGDGEIDYEEFIAMMMR 155
                 79************************85 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.3   2.5e-17   2.3e-14       3      66 .]      20      79 ..      18      79 .. 0.91
   2 !   49.3   0.9   3.8e-16   3.4e-13       3      66 .]      94     153 ..      87     153 .. 0.91

  Alignments for each domain:
  == domain 1    score: 53.1 bits;  conditional E-value: 2.5e-17
   PF13499.1  3 keaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66
                keaF l+Dkdg+g ++ +eL +++k lg    +  ++++l + ++e+D +g+G ++f+Efl+++
  MMETSP1325-20131115|3074_1 20 KEAFTLFDKDGSGAISIDELAQVMKSLG----QNPSKTELLEMIQEVDDDGSGEIDFQEFLTMM 79
                799*************************....66666666666*******************98 PP

  == domain 2    score: 49.3 bits;  conditional E-value: 3.8e-16
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                 +++F+ +D+ g+g + +++L +++  + ++++++e++e+    ++++Dk+gdG +++eEf +++
  MMETSP1325-20131115|3074_1  94 MKCFRVFDSEGTGCIPRDDLHQIIATMAEKMTEDEIKEF----IDDADKDGDGEIDYEEFIAMM 153
                 568*************************77777777777....******************997 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.1   5.2e-12   4.7e-09       1      31 []      18      47 ..      18      47 .. 0.96
   2 !   17.0   0.1   3.8e-06    0.0035       7      27 ..      60      80 ..      54      85 .. 0.84
   3 !   19.4   0.0   6.3e-07   0.00057       1      27 [.      92     118 ..      92     135 .. 0.92
   4 !   20.7   0.6   2.3e-07   0.00021       2      27 ..     129     154 ..     128     156 .] 0.86

  Alignments for each domain:
  == domain 1    score: 35.2 bits;  conditional E-value: 5.2e-12
                HHH---GCC-------B---HHHHHHH.H-- CS
   PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrkslg 31
                e++eaF+lfDkdg+G i+++EL ++++ slg
  MMETSP1325-20131115|3074_1 18 EFKEAFTLFDKDGSGAISIDELAQVMK-SLG 47
                79*************************.887 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 3.8e-06
                GCC-------B---HHHHHHH CS
   PF13405.1  7 klfDkdgdGkidaeELrdaLr 27
                +  D+dg+G+id++E++ ++ 
  MMETSP1325-20131115|3074_1 60 QEVDDDGSGEIDFQEFLTMMA 80
                678*************99885 PP

  == domain 3    score: 19.4 bits;  conditional E-value: 6.3e-07
                 HHH---GCC-------B---HHHHHHH CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrdaLr 27 
                 e++++F+ fD  g+G+i +++L +++ 
  MMETSP1325-20131115|3074_1  92 EMMKCFRVFDSEGTGCIPRDDLHQIIA 118
                 689*******************99876 PP

  == domain 4    score: 20.7 bits;  conditional E-value: 2.3e-07
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 ++e+ +  DkdgdG+id eE+++++ 
  MMETSP1325-20131115|3074_1 129 IKEFIDDADKDGDGEIDYEEFIAMMM 154
                 67777888***************986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   3.6e-06    0.0033      25      53 ..      17      45 ..       9      46 .. 0.89
   2 !   27.9   0.5   1.3e-09   1.2e-06       9      52 ..      38      80 ..      37      82 .. 0.91
   3 ?    0.5   0.0      0.45   4.1e+02      31      40 ..      97     106 ..      83     108 .. 0.72
   4 !   38.0   1.3   9.3e-13   8.4e-10       2      51 ..     105     153 ..     104     155 .. 0.95

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 3.6e-06
   PF13833.1 25 eevdilfrefDtdgdGkisfeEFcvller 53
                +e+ + f +fD dg+G+is +E  +++++
  MMETSP1325-20131115|3074_1 17 SEFKEAFTLFDKDGSGAISIDELAQVMKS 45
                5677889*******************987 PP

  == domain 2    score: 27.9 bits;  conditional E-value: 1.3e-09
   PF13833.1  9 eLkralallglkglseeevdilfrefDtdgdGkisfeEFcvlle 52
                eL   +++lg++ +s+ e+ +++ e+D dg+G i+f EF+++++
  MMETSP1325-20131115|3074_1 38 ELAQVMKSLGQN-PSKTELLEMIQEVDDDGSGEIDFQEFLTMMA 80
                666668889999.******************************7 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.45
   PF13833.1  31 frefDtdgdG 40 
                 fr+fD +g G
  MMETSP1325-20131115|3074_1  97 FRVFDSEGTG 106
                 7778877776 PP

  == domain 4    score: 38.0 bits;  conditional E-value: 9.3e-13
   PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvll 51 
                 +G+I r++L+ ++a++  k ++e+e+ + ++ +D dgdG i++eEF++++
  MMETSP1325-20131115|3074_1 105 TGCIPRDDLHQIIATMAEK-MTEDEIKEFIDDADKDGDGEIDYEEFIAMM 153
                 89***********998777.*****************************9 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1   3.5e-09   3.2e-06       2      25 .]      20      43 ..      19      43 .. 0.91
   2 !   19.4   0.3   4.5e-07   0.00041       5      25 .]      59      79 ..      55      79 .. 0.89
   3 ?    1.5   0.0      0.21   1.9e+02       2      10 ..      94     102 ..      93     108 .. 0.79
   4 !   22.4   1.2     5e-08   4.6e-05       1      25 []     129     153 ..     129     154 .. 0.87

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 3.5e-09
                HHHHHHH--S----B-HHHHHHHH CS
   PF13202.1  2 kdtFrafDlNgDGkIsreELkrlv 25
                k++F  fD++g+G Is++EL +++
  MMETSP1325-20131115|3074_1 20 KEAFTLFDKDGSGAISIDELAQVM 43
                678*****************9975 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 4.5e-07
                HHHH--S----B-HHHHHHHH CS
   PF13202.1  5 FrafDlNgDGkIsreELkrlv 25
                 +++D +g+G I+++E+ +++
  MMETSP1325-20131115|3074_1 59 IQEVDDDGSGEIDFQEFLTMM 79
                5899*************9875 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.21
                 HHHHHHH-- CS
   PF13202.1   2 kdtFrafDl 10 
                 ++ Fr+fD 
  MMETSP1325-20131115|3074_1  94 MKCFRVFDS 102
                 689*****6 PP

  == domain 4    score: 22.4 bits;  conditional E-value: 5e-08
                 HHHHHHHH--S----B-HHHHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkrlv 25 
                 +k++ + +D++gDG I+ eE+ +++
  MMETSP1325-20131115|3074_1 129 IKEFIDDADKDGDGEIDYEEFIAMM 153
                 5677789**************9864 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   1.4e-05     0.013      10      69 ..      17      79 ..       8      90 .. 0.76
   2 !   18.0   0.3   1.7e-06    0.0016      36      69 ..     120     153 ..      84     155 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.4e-05
   PF12763.2 10 kkyweifsgl.kpednkltgdkvapvlknskleedklekiwdladided..gkldfeefciam 69
                 ++ e f    k+ +  ++ d++a+v+k+   + +k e +  + ++d+d  g++df+ef  +m
  MMETSP1325-20131115|3074_1 17 SEFKEAFTLFdKDGSGAISIDELAQVMKSLGQNPSKTELLEMIQEVDDDgsGEIDFQEFLTMM 79
                44555555441456789999********9998888888888888888883358******9988 PP

  == domain 2    score: 18.0 bits;  conditional E-value: 1.7e-06
   PF12763.2  36 knskleedklekiwdladidedgkldfeefciam 69 
                    k++ed++++  d ad d dg++d+eef+ +m
  MMETSP1325-20131115|3074_1 120 MAEKMTEDEIKEFIDDADKDGDGEIDYEEFIAMM 153
                 356899************************8766 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0022         2      49     111 ..      12      76 ..       1      78 [. 0.77
   2 !   14.1   0.2   3.6e-05     0.032      59     111 ..      96     150 ..      76     152 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0022
   PF10591.4  49 skeckeaveWkFnqlDtnkdkvlsksElaplrapl..vklehCikeffksCDadkdkkisleEWc 111
                 +ke  ++ +  F  +D++  + +s  Ela++ ++l   + +    e++++ D d  ++i+++E+ 
  MMETSP1325-20131115|3074_1  12 TKEQVSEFKEAFTLFDKDGSGAISIDELAQVMKSLgqNPSKTELLEMIQEVDDDGSGEIDFQEFL 76 
                 555556666679999*******************9443444445578999999999*******96 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 3.6e-05
   PF10591.4  59 kFnqlDtnkdkvlsksElaplrapl..vklehCikeffksCDadkdkkisleEWc 111
                  F  +D++  + + +  l+++ a +     e  ikef++ +D d d++i+ eE+ 
  MMETSP1325-20131115|3074_1  96 CFRVFDSEGTGCIPRDDLHQIIATMaeKMTEDEIKEFIDDADKDGDGEIDYEEFI 150
                 588889999999999999999999866678999********************96 PP

>> PF11829.3  Protein of unknown function (DUF3349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.058        53      37      85 ..      35      79 ..       8      92 .. 0.66
   2 !   13.5   0.0   7.1e-05     0.065      20      60 ..     108     148 ..     105     155 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.058
                -HHHHHHHHHHHHH-----B-HHHHHHHHHHHHSS---HHHHHHHHHHH CS
   PF11829.3 37 tddevkevaaellergesatdaadiavlitevtdeepspedverVaarL 85
                + de+++v+++l ++     +++++ ++i+ev d+   + d +   + +
  MMETSP1325-20131115|3074_1 35 SIDELAQVMKSLGQN----PSKTELLEMIQEVDDDGSGEIDFQEFLTMM 79
                445666666666222....256677777777777666666666555555 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 7.1e-05
                 --GGGHHHHHHHHC----HHHHHHHHHHHHH-----B-HHH CS
   PF11829.3  20 vpekdyvplLaLLrrrLtddevkevaaellergesatdaad 60 
                 +p+ d  +++a +++++t+de+ke +++  ++g+ ++d ++
  MMETSP1325-20131115|3074_1 108 IPRDDLHQIIATMAEKMTEDEIKEFIDDADKDGDGEIDYEE 148
                 89**************************9999988776655 PP

>> PF08726.5  Ca2+ insensitive EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1      0.15   1.4e+02      32      67 ..      47      79 ..       9      81 .. 0.55
   2 !   15.2   0.4   1.6e-05     0.014       2      68 ..      87     154 ..      86     155 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.15
   PF08726.5 32 lpeqa.eyllerMpeysgpegdetegayDYesFlekl 67
                 ++     lle ++e+     d  +g+ D+++Fl+ +
  MMETSP1325-20131115|3074_1 47 GQNPSkTELLEMIQEVD----DDGSGEIDFQEFLTMM 79
                44444444555555555....3458888999998765 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 1.6e-05
   PF08726.5   2 tdsaeqveeaFral.aegKpYvTeedLraallpeqa.eyllerMpeysgpegdetegayDYesFleklf 68 
                 +d+ae++++ Fr+   eg   +  +dL + + + +a +   ++++e+ +   +   g+ DYe+F+  ++
  MMETSP1325-20131115|3074_1  87 VDTAEEMMKCFRVFdSEGTGCIPRDDLHQII-ATMAeKMTEDEIKEFIDDADKDGDGEIDYEEFIAMMM 154
                 79************999**********8755.55553777889****98888888999******99887 PP

>> PF03672.8  Uncharacterised protein family (UPF0154)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00046      0.42      32      60 ..      34      62 ..      32      65 .. 0.87
   2 ?    2.9   0.0     0.084        77      33      60 ..     109     136 ..     107     139 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00046
   PF03672.8 32 inedairlmlaqmGrkpSekqinqilkai 60
                i+ d +  +++++G++pS++ + ++++++
  MMETSP1325-20131115|3074_1 34 ISIDELAQVMKSLGQNPSKTELLEMIQEV 62
                566788899***************99887 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.084
   PF03672.8  33 nedairlmlaqmGrkpSekqinqilkai 60 
                   d +  ++a m  k  e  i++ +  +
  MMETSP1325-20131115|3074_1 109 PRDDLHQIIATMAEKMTEDEIKEFIDDA 136
                 56889999**************987665 PP

>> PF00210.19  Ferritin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.9   0.00013      0.12      48     110 ..      36     110 ..      33     139 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00013
                 HHHHHHHHHHT--...TTHH..HHHHB--SSS....SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT......T CS
  PF00210.19  48 adklaerilklggkpeltrv..elkeikkpae....wgdvlealeaalelekevtkslreliklaeee......k 110
                 +d+la+ +  lg+ p  t+    ++e+++  +    + + l ++++al  e++ ++++ +  ++ ++e      +
  MMETSP1325-20131115|3074_1  36 IDELAQVMKSLGQNPSKTELleMIQEVDDDGSgeidFQEFLTMMANALSKEVDTAEEMMKCFRVFDSEgtgcipR 110
                 699**********7777765432333444444789888*********************9999999885555541 PP

>> PF03874.11  RNA polymerase Rpb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.069        63      55     113 ..      13      80 ..       4      83 .. 0.59
   2 ?    9.4   0.1   0.00098      0.89      83     111 ..     107     135 ..     105     138 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.069
                 CCCHHHHCCCCTTS-.......-HHHHHCHHH...H--SSCCCCCCCSTTGTTSS-HHHHHHHHHHHH CS
  PF03874.11  55 eeevrelveelksfe......ltkaeklqivn...lrPetavelkalieslekrfsdeqleeiLdels 113
                 +e+v+e+ e +  f+      ++  e++q++    + P++++ l  + e +++   + + +e+L++++
  MMETSP1325-20131115|3074_1  13 KEQVSEFKEAFTLFDkdgsgaISIDELAQVMKslgQNPSKTELLEMIQEVDDDGSGEIDFQEFLTMMA 80 
                 45544444444433333366777777777765222457777777777777777777777777777665 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00098
                 -SSCCCCCCCSTTGTTSS-HHHHHHHHHH CS
  PF03874.11  83 PetavelkalieslekrfsdeqleeiLde 111
                 +   ++l+ +i+ + +++++++++e++d 
  MMETSP1325-20131115|3074_1 107 CIPRDDLHQIIATMAEKMTEDEIKEFIDD 135
                 66689********************9985 PP

>> PF09033.5  DNA Fragmentation factor 45kDa, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   9.4e-05     0.085      54     127 ..      34     107 ..      31     132 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9.4e-05
   PF09033.5  54 vpvselasalev..sekkvqslqdtlqrvldrreeerqskqllelylkalekegtikeqeesaalaeeadevdtgv 127
                 ++ +ela++++   ++    +l +++q v d    e   +++l +  +al ke  +++ ee  + +   d+  tg 
  MMETSP1325-20131115|3074_1  34 ISIDELAQVMKSlgQNPSKTELLEMIQEVDDDGSGEIDFQEFLTMMANALSKE--VDTAEEMMKCFRVFDSEGTGC 107
                 7899****998622344566899******************************..999999999888888877775 PP

>> PF11455.3  Protein  of unknown function (DUF3018)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.17   1.5e+02      35      61 ..      38      65 ..      34      69 .. 0.80
   2 ?    8.9   0.2    0.0014       1.3      34      64 ..     111     142 ..     109     143 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.17
   PF11455.3 35 eirrqsalvaqdaeeaevlafldea.ad 61
                e+++  + + q+++++e+l++++e+  d
  MMETSP1325-20131115|3074_1 38 ELAQVMKSLGQNPSKTELLEMIQEVdDD 65
                6677778889999**********99444 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0014
   PF11455.3  34 aeirrqsalvaqdaeeaevlafldea.adled 64 
                 +++++ +a +a++ +e+e+++f+d+a  d ++
  MMETSP1325-20131115|3074_1 111 DDLHQIIATMAEKMTEDEIKEFIDDAdKDGDG 142
                 577888999*****************888887 PP

>> PF12363.3  Phage protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.2     0.043        39      65     102 ..      45      81 ..      34      95 .. 0.76
   2 ?    6.9   0.3    0.0066       6.1      63      87 ..     117     140 ..     111     154 .. 0.73

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.043
   PF12363.3  65 hekknpsreeieeaieevieeeddieelfdevlkelkk 102
                 ++++nps+ e+ e i+e ++++++ e  f+e l  + +
  MMETSP1325-20131115|3074_1  45 SLGQNPSKTELLEMIQE-VDDDGSGEIDFQEFLTMMAN 81 
                 457899*********98.66666677777777776654 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0066
   PF12363.3  63 tahekknpsreeieeaieevieeed 87 
                 +a++ ++ +++ei+e+i++ +++++
  MMETSP1325-20131115|3074_1 117 IATMAEKMTEDEIKEFIDD-ADKDG 140
                 56778899**********8.44433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       912  (0.0667057); expected 273.4 (0.02)
Passed bias filter:                      755  (0.0552224); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.56u 0.43s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 705.34
//
Query:       MMETSP1325-20131115|3076_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|3077_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-29  102.5   0.1      2e-29  102.3   0.0    1.0  1  PF01008.12 Initiation factor 2 subunit family


Domain annotation for each model (and alignments):
>> PF01008.12  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.3   0.0   1.4e-33     2e-29     172     280 ..       1     115 [.       1     116 [. 0.97

  Alignments for each domain:
  == domain 1    score: 102.3 bits;  conditional E-value: 1.4e-33
                 HHHTECEEEE---EEETTE-EEEE---HHHHHHHHHTT-EEEEB--GGGBETTS--GGGS---B--THHHHBB---BCSST.......T-EE--BSEEEEEGGG-SEEB-----B- CS
  PF01008.12 172 mseevdkvivGAdrilenGaiankiGTsslAvlAkefnipvlvvaeslkfservqldedifieerdpeellvvtgeriaee.......elkvvnpafDvtPpelItliITevGvlt 280
                 m + v+kv+ GA +i++nGa+ ++iGT+ +A+ A + n+pv+ ++e++k++ervqld+ + +e+++p  l+  + e +++         lk++n+ +D+tP +++ ++ITevG+++
  MMETSP1325-20131115|3077_1   1 MAN-VTKVFMGAAAIMANGAVLSRIGTAIVAMTATSLNVPVIFCCETYKLCERVQLDSIVSNELGNPGLLASSSIESMQPLakwkqttGLKLLNLRYDLTPMKYVGMVITEVGMIP 115
                 556.********************************************************************99999998899*******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 633.00
//
Query:       MMETSP1325-20131115|3069_1  [L=516]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-21   76.3   0.0    3.5e-21   75.2   0.0    1.5  1  PF03109.11 ABC1 family
    5.9e-05   22.3   0.2    0.00011   21.4   0.1    1.4  1  PF01163.17 RIO1 family
    7.6e-05   22.4   0.1    0.00018   21.1   0.1    1.6  1  PF01636.18 Phosphotransferase enzyme family
     0.0025   16.8   0.0        0.2   10.6   0.0    2.2  2  PF00069.20 Protein kinase domain
  ------ inclusion threshold ------
      0.014   14.4   0.0        2.4    7.0   0.0    2.2  2  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF03109.11  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.0   1.3e-24   3.5e-21       4     117 ..      65     179 ..      63     181 .. 0.94

  Alignments for each domain:
  == domain 1    score: 75.2 bits;  conditional E-value: 1.3e-24
  PF03109.11   4 gkpveevFaefdeePlAaASiaQVHrAvlks.geeVavKvqrpgvkkriksDlkllkllakllkkiskearldleelvdelskelaeeldfkrEAknaekfrenfaklkevkvPk 117
                 g+ +++  +  + eP++++ +aQV+++ +k   e Va+Kv +p++++++++Dl++l+ +a  +++++  + l   ++vd+++ +++e+ld+++EA++ ++f +nf++ ++v++P 
  MMETSP1325-20131115|3069_1  65 GEGWRDKLSVESTEPVGSGCVAQVYKGHVKGlPEPVAIKVLHPRINESVSADLDVLRSIAAFFERFQRFKPLGPVAIVDDFRLRMVEQLDLRNEAAHLRRFIKNFENEQDVEFPY 179
                 66667777777899****************999************************************99*****************************************996 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   4.2e-08   0.00011      66     142 ..     171     248 ..     140     252 .. 0.78

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 4.2e-08
                 HH----S--EEE..EETTEEEEE----TTCEGGCTTTS-.-HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESSS CS
  PF01163.17  66 eeagvrvPkpia..lkrnvlvmefigedgvaapklkdveleeaeelyeeileemrklykeaglvHaDLSeyNvlvdedk 142
                 +e++v+ P pi+  +++ vlv +f+  d  ++ +  + + +  ++l++  l+++ k++   +lvH+DL   Nv+v+++k
  MMETSP1325-20131115|3069_1 171 NEQDVEFPYPIDqfVHEKVLVESFLV-DARPILEYTHCDQRTKRRLADIGLRAVMKMLLLDNLVHGDLHPGNVMVTKKK 248
                 345678888887447889********.88888888888878999999999*************************9987 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.1   6.7e-08   0.00018      75     181 ..      98     245 ..      78     252 .. 0.53

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 6.7e-08
                 E---HHBCCT..CSHHHHHHHHHHHHHHHHHHHHHS--TTSHGG....................................HCTBCTHHHHHHHHHHHHHHHHHCTHHHHHHHHHH.........................................HHHHHHHHHHCSS--EEB-SS-SGGGEEEE CS
  PF01636.18  75 eyvpgevler..klnarqlpallealaellaalhqadpaadpla....................................dflapyltllrllesataalvasellelleeleer.........................................vlaalaallpgaeppvllHgDlhpgNllvd 181
                 e v ++vl++  +++ + + ++l+ +a++  +++++ ++  p+a                                    +                                                                           ++a ++ ll+      l+HgDlhpgN++v+
  MMETSP1325-20131115|3069_1  98 EPVAIKVLHPriNESVSADLDVLRSIAAFFERFQRF-KPLGPVAivddfrlrmveqldlrneaahlrrfiknfeneqdveF---------------------------------PypidqfvhekvlvesflvdarpileythcdqrtkrrladigLRAVMKMLLL----DNLVHGDLHPGNVMVT 245
                 556666666666677888888888888888888888.55455553332222222232222222222222222222222220.................................1333333333334444444444444444444444444444444555555555....89*************9 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   7.2e-05       0.2       3      39 ..      76     112 ..      74     130 .. 0.86
   2 !    4.0   0.0    0.0075        21     112     137 ..     225     250 ..     166     268 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 7.2e-05
                 EEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHH CS
  PF00069.20   3 lleklGsGsfGkVykakkkktgkkvAvKilkkeeeks 39 
                   e +GsG +++Vyk++ k+ ++ vA+K+l+ + ++s
  MMETSP1325-20131115|3069_1  76 STEPVGSGCVAQVYKGHVKGLPEPVAIKVLHPRINES 112
                 6789*************************99886665 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0075
                 HHHHHTCEE-S--SGGGEEEETT--E CS
  PF00069.20 112 eylHsngiiHrDLKpeNiLldkkgel 137
                 + l  ++++H DL p N++++kk+++
  MMETSP1325-20131115|3069_1 225 KMLLLDNLVHGDLHPGNVMVTKKKYT 250
                 44555699************988765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0   0.00087       2.4       3      44 ..      76     113 ..      74     137 .. 0.82
   2 ?    5.2   0.0    0.0033         9     116     141 ..     224     249 ..     157     274 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00087
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHH CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeee 44 
                  ++ +G+G  ++V++g++k         Va+K+l+ + +e+ 
  MMETSP1325-20131115|3069_1  76 STEPVGSGCVAQVYKGHVK----GLPEPVAIKVLHPRINESV 113
                 67889**************....78899******88766664 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0033
                 HHHHHHTTEEEST-SGGGEEEETTTE CS
  PF07714.12 116 meyLeskklvHrdLaarNvLleeekv 141
                 m+ L   +lvH dL   Nv+++++k 
  MMETSP1325-20131115|3069_1 224 MKMLLLDNLVHGDLHPGNVMVTKKKY 249
                 8888899***************9774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.86u 0.35s 00:00:01.21 Elapsed: 00:00:01.07
# Mc/sec: 1155.63
//
Query:       MMETSP1325-20131115|3075_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       506  (0.0370099); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.56
# Mc/sec: 1067.85
//
Query:       MMETSP1325-20131115|3082_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1052.31
//
Query:       MMETSP1325-20131115|3084_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|3085_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 464.29
//
Query:       MMETSP1325-20131115|3087_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.59
# Mc/sec: 365.55
//
Query:       MMETSP1325-20131115|3083_1  [L=298]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-17   60.6   0.0     0.0059   16.4   0.0    5.6  5  PF13516.1  Leucine Rich repeat
    7.7e-06   25.3   0.0      0.051   13.1   0.0    3.3  3  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
       0.04   13.5   0.0         11    5.7   0.0    2.6  3  PF13855.1  Leucine rich repeat
       0.11   11.8   1.0         12    5.3   0.0    3.0  3  PF02022.14 Integrase Zinc binding domain


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.7e-06    0.0059       1      23 [.     167     189 ..     167     190 .. 0.96
   2 !   11.6   0.0   5.9e-05       0.2       1      22 [.     192     213 ..     192     215 .. 0.96
   3 !    9.6   0.0   0.00026       0.9       1      23 [.     217     239 ..     217     240 .. 0.96
   4 !    8.9   0.0   0.00044       1.5       1      23 [.     242     265 ..     242     266 .. 0.95
   5 !    6.8   0.0    0.0022       7.7       1      16 [.     268     283 ..     268     290 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.7e-06
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLa 23 
                 ++n++++ Ls+++++d G+ a+a
  MMETSP1325-20131115|3083_1 167 CPNIQDIYLSYTPVTDAGALAIA 189
                 9******************9998 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 5.9e-05
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaL 22 
                 ++nLt +d+ ++q++d G++a+
  MMETSP1325-20131115|3083_1 192 CPNLTRIDMFDTQVTDVGAMAI 213
                 9*******************98 PP

  == domain 3    score: 9.6 bits;  conditional E-value: 0.00026
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLa 23 
                 +++L+ ++++++q++d+++ a+a
  MMETSP1325-20131115|3083_1 217 CPKLKRIQFGKTQVTDQFALAIA 239
                 9******************9998 PP

  == domain 4    score: 8.9 bits;  conditional E-value: 0.00044
   PF13516.1   1 lknLtsLdLsnNq.igdeGlsaLa 23 
                 ++n t++ L++N+ +++ G++a+a
  MMETSP1325-20131115|3083_1 242 CPNVTWIGLNRNGgVTNVGAQAIA 265
                 9***********88********98 PP

  == domain 5    score: 6.8 bits;  conditional E-value: 0.0022
   PF13516.1   1 lknLtsLdLsnNqigd 16 
                 ++nLt++ L ++++++
  MMETSP1325-20131115|3083_1 268 CPNLTHFYLHDTPVTS 283
                 9***********9986 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   1.5e-05     0.051       1      39 [.     168     208 ..     168     212 .. 0.88
   2 !    9.9   0.0   0.00015       0.5       1      38 [.     193     232 ..     193     241 .. 0.87
   3 !    6.8   0.0    0.0014       4.8       2      38 ..     244     283 ..     218     291 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.5e-05
   PF12799.2   1 tnLevLdLsnNnIkdlppela...nLpnLktLnLsnNpisdl 39 
                 +n + ++Ls+++++d ++ la   ++pnL+ +++  ++++d+
  MMETSP1325-20131115|3083_1 168 PNIQDIYLSYTPVTDAGA-LAiaaGCPNLTRIDMFDTQVTDV 208
                 799**************9.54445**********99999996 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00015
   PF12799.2   1 tnLevLdLsnNnIkdlppe..lanLpnLktLnLsnNpisd 38 
                 +nL+ +d  +++++d+++   +a++p+Lk +    ++++d
  MMETSP1325-20131115|3083_1 193 PNLTRIDMFDTQVTDVGAMaiVASCPKLKRIQFGKTQVTD 232
                 7****************97767*******99877777776 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0014
   PF12799.2   2 nLevLdLsnNn.Ikdlppe.l.anLpnLktLnLsnNpisd 38 
                 n + + L++N  +++++++ + a++pnL++ +L  +p+++
  MMETSP1325-20131115|3083_1 244 NVTWIGLNRNGgVTNVGAQaIaASCPNLTHFYLHDTPVTS 283
                 5666667888448888886665799*******99999987 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0    0.0086        30      24      58 ..     167     202 ..     156     205 .. 0.80
   2 ?    2.9   0.0     0.023        80       1      59 [.     193     253 ..     193     254 .. 0.76
   3 ?    5.7   0.0    0.0033        11       1      38 [.     243     282 ..     243     292 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0086
   PF13855.1  24 lsnLkvLdLsgnnlksisp.eafkgLpsLreLnLsg 58 
                 ++n + ++Ls++  +   +  + +g+p+L+ +++ +
  MMETSP1325-20131115|3083_1 167 CPNIQDIYLSYTPVTDAGAlAIAAGCPNLTRIDMFD 202
                 599999999999999887745689999999998865 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.023
   PF13855.1   1 pnLkeLdLsnNrlkvipd.gaFkglsnLkvLdLsgnnlksisp.eafkgLpsLreLnLsgN 59 
                 pnL+++d  ++  ++++   +  ++++Lk + ++++  +   +  + +++p+++++ L  N
  MMETSP1325-20131115|3083_1 193 PNLTRIDMFDTQVTDVGAmAIVASCPKLKRIQFGKTQVTDQFAlAIAASCPNVTWIGLNRN 253
                 6788888888888888553667799******999999975544266788999998888776 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.0033
   PF13855.1   1 pnLkeLdLsnN.rlkvi.pdgaFkglsnLkvLdLsgnnlk 38 
                 pn++ + L++N   +++ ++ +  +++nL++++L+++  +
  MMETSP1325-20131115|3083_1 243 PNVTWIGLNRNgGVTNVgAQAIAASCPNLTHFYLHDTPVT 282
                 6788888998889999944566679999999999977665 PP

>> PF02022.14  Integrase Zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0034        12      26      37 ..     210     221 ..     204     224 .. 0.80
   2 ?   -1.0   0.0      0.32   1.1e+03      24      35 ..     233     244 ..     229     249 .. 0.79
   3 ?    3.6   0.0     0.012        39      15      35 ..     250     270 ..     245     274 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0034
  PF02022.14  26 AkeIVnsCpkCq 37 
                 A  IV+sCpk +
  MMETSP1325-20131115|3083_1 210 AMAIVASCPKLK 221
                 889******976 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.32
  PF02022.14  24 lvAkeIVnsCpk 35 
                 + A  I +sCp+
  MMETSP1325-20131115|3083_1 233 QFALAIAASCPN 244
                 5677899***97 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.012
  PF02022.14  15 LrskFgiPrlvAkeIVnsCpk 35 
                 L ++ g++++ A  I +sCp+
  MMETSP1325-20131115|3083_1 250 LNRNGGVTNVGAQAIAASCPN 270
                 55666899999********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.55
# Mc/sec: 1298.39
//
Query:       MMETSP1325-20131115|3091_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.1    8.3   5.4        2.9    7.8   1.1    2.2  2  PF04569.9 Protein of unknown function


Domain annotation for each model (and alignments):
>> PF04569.9  Protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   1.1   0.00021       2.9       8      44 ..      13      49 ..       9      69 .. 0.70
   2 ?    2.0   0.1     0.014   1.9e+02       5      24 ..     101     120 ..      83     123 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00021
   PF04569.9  8 kaeadggrrtaaaeggarrgdtgkgehtGlargtrgd 44
                 a+++ +r++   + g+++ dt ++eh+G +   + +
  MMETSP1325-20131115|3091_1 13 RARREARRWAQMLKMGQVVLDTMEKEHIGAMFNEEAS 49
                478899999999*****************86544433 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.014
   PF04569.9   5 ekekaeadggrrtaaaegga 24 
                 ++++ae++++ r++ a++ a
  MMETSP1325-20131115|3091_1 101 KERDAEMSQEQRASDAHAHA 120
                 68899999999998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 582.64
//
Query:       MMETSP1325-20131115|3086_1  [L=515]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2000  (0.146284); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                       104  (0.00760679); expected 13.7 (0.001)
Passed Fwd filter:                        39  (0.00285255); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 2.01u 0.41s 00:00:02.42 Elapsed: 00:00:00.96
# Mc/sec: 1285.55
//
Query:       MMETSP1325-20131115|3093_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00032   20.2   0.6    0.00051   19.6   0.4    1.3  1  PF10208.4 Degradation arginine-rich protein for mis-folding


Domain annotation for each model (and alignments):
>> PF10208.4  Degradation arginine-rich protein for mis-folding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.4   3.7e-08   0.00051       2      91 ..      28     117 ..      27     124 .. 0.73

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 3.7e-08
                 THHHHHHHHH...HHHHHHH------HHHHH...HHHHHHHCT-..---HHHHHHH----TTS-HHHHHHHHHHHCTT--HHHHHHHHHTT-GGGGT- CS
   PF10208.4   2 cevcvkfler...llqsleerdvklssdkie...kellkackea..kgkenrlcyylGalkdsatkilnevskPlsakvPvekiceklkkkdaqicel 91 
                 c vc +++ +   +++ l+ +d   s+d++    +++   c+++  +  e+r+c +l  l++ a+k        l +k+ v +ic+kl+k + q c l
  MMETSP1325-20131115|3093_1  28 CPVCENLVAQvvdVYADLRAED-SGSTDRVSlaaQAVDVYCRNNmiNTSERRMCSFLEPLRQVAAKA-------LAMKMSVPRICKKLHKENPQTCGL 117
                 6677666655111566674444.4466666422278889998762257899***********99975.......677888889*************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       497  (0.0363517); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 815.68
//
Query:       MMETSP1325-20131115|3092_1  [L=464]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-14   52.8   0.0    4.8e-14   51.8   0.0    1.5  1  PF00179.21 Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
       0.14   10.6   6.2       0.22    9.9   4.3    1.2  1  PF08317.6  Spc7 kinetochore protein
       0.21   11.2   1.2       0.32   10.6   0.0    1.9  2  PF06582.7  Repeat of unknown function (DUF1136)
       0.29    9.8   2.3       0.75    8.5   1.7    1.6  2  PF13406.1  Transglycosylase SLT domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.0   1.4e-17   4.8e-14      16     111 ..     157     268 ..     137     279 .. 0.82

  Alignments for each domain:
  == domain 1    score: 51.8 bits;  conditional E-value: 1.4e-17
                 CEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS............--SCTTB-.----B-HGGGSTTT...--T.T--HHHHHHHHHHHHHS- CS
  PF00179.21  16 gikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvt............kifHPnvd.etGeicldiLkeek...Wsp.altlesvLlsiqsllaep 111
                 ++ +++ + ++ + ++++++g +gtpYe g+F ++i +p+ YP +   v+ vt              f Pn++  tG++cl++L +++   W++  +++ +vL si+ ++   
  MMETSP1325-20131115|3092_1 157 SMFVRYDD-EKPQFMQACLTGVQGTPYESGCFIFDIYMPDTYPQTNCLVTHVTknasmvsanngpGGFSPNLHrDTGKVCLSLLGTWNgpgWEAgKSNVYQVLSSILWMILGA 268
                 33333333.588899*****************************9999999999**********999********************9******99***********998544 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.3   6.6e-05      0.22     142     247 ..     343     454 ..     341     462 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 6.6e-05
   PF08317.6 142 WRmklleglkeeLeenleelkedeellnkk...lelinsilpklrekkealkeelasLrqlkdeleecdseeleklr...eeLssleekieekrkkleeleeelqelkkkie 247
                 W  k ++glk++L+  +eelk + ++l++    +++++++  +++ ++e+++   a+ +++ ++++   ++  + l+   e L++ +e +++k+++l+e+e++  e++++ +
  MMETSP1325-20131115|3092_1 343 WHDKGTDGLKSKLAPVIEELKVEFAKLMTVedaQQELSEAQLEVNFILEKIQYLEAKVKAAGKDAKLKVPKAYRRLKmgpELLAQGQERVKAKQEQLAEMEKKAVEKAAAAA 454
                 99999*********************99751114455555555555555555555555555555665555555555533233555566666666666666666655555444 PP

>> PF06582.7  Repeat of unknown function (DUF1136)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   9.3e-05      0.32      11      22 ..     390     401 ..     390     407 .. 0.80
   2 ?   -2.6   0.2       1.3   4.5e+03      12      21 ..     437     446 ..     437     450 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9.3e-05
   PF06582.7  11 LeKIqeLEdpsr 22 
                 LeKIq+LE+  +
  MMETSP1325-20131115|3092_1 390 LEKIQYLEAKVK 401
                 8*******9765 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.3
   PF06582.7  12 eKIqeLEdps 21 
                 e+++e+E   
  MMETSP1325-20131115|3092_1 437 EQLAEMEKKA 446
                 8999*99765 PP

>> PF13406.1  Transglycosylase SLT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       1.5   5.1e+03      56      77 ..      81     102 ..      69     104 .. 0.62
   2 ?    8.5   1.7   0.00022      0.75      14      83 ..     375     445 ..     363     454 .. 0.82

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 1.5
                 xxxxxxxxxxxxxxxxxxxxxx RF
   PF13406.1  56 rfvtekriakGraflkehaall 77 
                 r +t +r++++++ ++ +++++
  MMETSP1325-20131115|3092_1  81 RQTTVDRAKNCEQIWDSYKEAI 102
                 3444556666666666666554 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00022
                 xxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF13406.1  14 aaegvseet..leaalagaelkpkvieldkkqaeftktleeYlkrfvtekriakGraflkehaallarieke 83 
                 a++++se++  ++ +l+++++ +  +++  k a+ +   ++Y++  + ++ +a+G++ +k+++++la++ek+
  MMETSP1325-20131115|3092_1 375 AQQELSEAQleVNFILEKIQYLEAKVKAAGKDAKLK-VPKAYRRLKMGPELLAQGQERVKAKQEQLAEMEKK 445
                 556666665115667999999999999999999876.79******************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       806  (0.0589526); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.81u 0.36s 00:00:01.17 Elapsed: 00:00:00.70
# Mc/sec: 1588.44
//
Query:       MMETSP1325-20131115|3098_1  [L=329]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     1e-112  376.9   3.3   1.2e-112  376.7   2.3    1.0  1  PF00012.15 Hsp70 protein
  ------ inclusion threshold ------
      0.054   13.0   0.0       0.17   11.4   0.0    1.8  2  PF02782.11 FGGY family of carbohydrate kinases, C-terminal domain
       0.25   11.3   1.5        3.4    7.6   0.1    2.5  2  PF11964.3  Protein of unknown function (DUF3478)


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  376.7   2.3  2.6e-116  1.2e-112     301     602 .]       2     311 ..       1     311 [. 0.98

  Alignments for each domain:
  == domain 1    score: 376.7 bits;  conditional E-value: 2.6e-116
                 HHHCHHHHCTTTHHHHHHHHHCTXXCCCESEEEEEXXETTSHHHHHHHHHHTX.XXEEXSSXTTTTTTXXXTTCHHHCSSSSXXXXXXECEEESS-E-EEEEE--EEEEESTTCESSEEEEEEEEESCCCESSEEEEEEES-GSSGGGSEEEEEEEEE---S-------EEEEEEE-----EEEEEEESE---EEEEEE-TT--.--HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC....GGGSSHHHH...HHHHHHHHHHHHHHT----HHHHHHHHHHHHHCHHHHHHHHHH CS
  PF00012.15 301 eeLvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsksvnpDeavAiGaAvqaavlsgeeevkdllllDvtpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelakdnkllgkfeltgippaprGvpqieVtfdidanGiltvsakdkstgkeekitieaseg.lsedeiekmvkeaeesaeedkkkkeaieakneleelvyslekkleee....kekvseaek...ekkveeaieelkeelegedkeeieakleelekvvekiveklye 602
                 eeL++dl+++tl pv k+l+d++++k ++devvlvGGstRiPkvq+l+k++f+ keps+++npDeavA+GaAvq+++++ ee ++d++ll v+pLs giet+ggvmt+li+rnt+iptkksq+fst++dnq av i+v++ger+++kdn++lg+feltg+ppaprGvpqieVtf+idanGil+vsakdk+tgk e+iti+a++g ls+++ie+mv+eae +aeedkk k++i+akn le ++y+l+++le++    + k+se++k     +++ea+++l+e+  + ++ee+e+k+ee+e+v+++i+++ly+
  MMETSP1325-20131115|3098_1   2 EELNMDLFKKTLVPVGKVLEDGGVQKTDVDEVVLVGGSTRIPKVQQLLKDYFNgKEPSRGINPDEAVAYGAAVQGGIFNREEATNDVILLEVAPLSQGIETAGGVMTRLISRNTVIPTKKSQTFSTFQDNQAAVLIQVYEGERSMTKDNRRLGNFELTGLPPAPRGVPQIEVTFEIDANGILQVSAKDKGTGKAESITITAEKGsLSDEDIERMVQEAEDFAEEDKKIKARIDAKNGLEGYLYNLRNTLEDDerglAGKLSEEDKeelDGTINEALDWLDENP-EAETEEFEQKQEEVEQVANPIMRELYQ 311
                 89**************************************************99****************************************************************************************************************************************************************************************************998899899999999888889***********5.8889******************99986 PP

>> PF02782.11  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.7e-05      0.17     146     194 ..      27      77 ..       5      79 .. 0.87
   2 ?   -2.7   0.0      0.77   3.5e+03      49      57 ..     276     284 ..     238     308 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.7e-05
  PF02782.11 146 gaplsrlavdGGgsrndllmqllAdilg..vpVerprtaeatalGaAllAa 194
                 + ++++++++GG +r + ++qll d ++   p + + ++ea+a GaA+ ++
  MMETSP1325-20131115|3098_1  27 KTDVDEVVLVGGSTRIPKVQQLLKDYFNgkEPSRGINPDEAVAYGAAVQGG 77 
                 4559************************9999888899*********9987 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.77
  PF02782.11  49 lvkwlrdnl 57 
                 +++wl +n 
  MMETSP1325-20131115|3098_1 276 ALDWLDENP 284
                 455665554 PP

>> PF11964.3  Protein of unknown function (DUF3478)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1   0.00074       3.4      18      55 ..     204     242 ..     189     258 .. 0.84
   2 ?    2.3   0.1     0.032   1.4e+02      18      38 ..     258     278 ..     254     292 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00074
                 -----HHHHHHHHHHH---GG--SS--EEEE-T.T---- CS
   PF11964.3  18 sGklteedyeelipaleekleehgkvrllvdle.efegw 55 
                 +G l++ed+e+++++ e+  ee +k++  +d++  +eg+
  MMETSP1325-20131115|3098_1 204 KGSLSDEDIERMVQEAEDFAEEDKKIKARIDAKnGLEGY 242
                 699*************************99999888886 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.032
                 -----HHHHHHHHHHH---GG CS
   PF11964.3  18 sGklteedyeelipaleekle 38 
                  Gkl+eed eel  +++e+l+
  MMETSP1325-20131115|3098_1 258 AGKLSEEDKEELDGTINEALD 278
                 599*************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       920  (0.0672908); expected 273.4 (0.02)
Passed bias filter:                      630  (0.0460796); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.41s 00:00:01.19 Elapsed: 00:00:00.68
# Mc/sec: 1159.41
//
Query:       MMETSP1325-20131115|3100_1  [L=236]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-05   22.7   0.0    0.00014   21.5   0.0    1.6  1  PF04073.10 YbaK / prolyl-tRNA synthetases associated domain


Domain annotation for each model (and alignments):
>> PF04073.10  YbaK / prolyl-tRNA synthetases associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0     1e-08   0.00014      31      87 ..      72     129 ..      55     137 .. 0.86

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 1e-08
  PF04073.10  31 kgelvlvllpgdreldlkklakalga..kklrlaseeelaellgvepGavgPlglkaag 87 
                 +g +v+v++p + +++lk +a ++ +  k+l++a+  e+a++lg+ p  ++P+g    +
  MMETSP1325-20131115|3100_1  72 DGDMVVVITPSTCKISLKMVAMHYSVarKRLKFAKRSEVARILGYLPQQLPPIGFR-SQ 129
                 4669*********************5468*************************84.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.51
# Mc/sec: 1108.90
//
Query:       MMETSP1325-20131115|3095_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.23   10.9   0.0    1.4  2  PF00489.12 Interleukin-6/G-CSF/MGF family


Domain annotation for each model (and alignments):
>> PF00489.12  Interleukin-6/G-CSF/MGF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.7e-05      0.23      93     137 ..      33      77 ..      15      83 .. 0.87
   2 ?   -3.5   0.0      0.44     6e+03       1      12 [.     158     169 ..     153     181 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.7e-05
                 HHHHHHHHHHHH....-----SS-----------SHHHHH----H CS
  PF00489.12  93 tliqilkqkvkdldkvlvpaPatqatlsaklqsqseflrrativl 137
                 +l  ++  +++d ++ l+  P++++  +  l+s+ +flr+   ++
  MMETSP1325-20131115|3095_1  33 VLNGLVALQIEDANAKLGLPPTSDPATQRLLASTRAFLRKHRLHM 77 
                 455667889******************************998776 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 0.44
                 HHHH-----HHH CS
  PF00489.12   1 irkilgkisalr 12 
                 ir+i+g is+l 
  MMETSP1325-20131115|3095_1 158 IRQIRGAISELX 169
                 688888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1073.92
//
Query:       MMETSP1325-20131115|3102_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-06   26.2  10.2     0.0034   17.7   0.0    3.2  4  PF13513.1  HEAT-like repeat
     0.0003   20.5   1.4        2.3    8.4   0.1    3.9  4  PF02985.17 HEAT repeat
    0.00057   19.9   8.6      0.035   14.2   2.0    2.6  3  PF13646.1  HEAT repeats
  ------ inclusion threshold ------
      0.019   15.2   0.0       0.14   12.4   0.0    2.2  2  PF12755.2  Vacuolar 14 Fab1-binding region


Domain annotation for each model (and alignments):
>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0     1e-06    0.0034       5      55 .]      14      64 ..      10      64 .. 0.88
   2 ?   -1.4   0.1         1   3.6e+03      22      33 ..      77      88 ..      66      91 .. 0.51
   3 !   13.9   0.6   1.7e-05     0.057       3      52 ..      99     148 ..      97     150 .. 0.92
   4 ?   -2.5   0.0       2.3   7.7e+03       4      14 ..     177     187 ..     174     194 .. 0.51

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1e-06
   PF13513.1  5 raAawaLGrlaggeprllepavpellpaLlelLeddddeVReaAawALgrl 55
                +++a aLGr+a  ++  +  ++p  +  L+   ++d+  V+++A+ A+grl
  MMETSP1325-20131115|3102_1 14 QGSAIALGRIAMHAGPAALALHPSFMSHLRGFAAHDHQLVQGSACEAIGRL 64
                57888****6666788888899***************************97 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 1
   PF13513.1 22 lepavpellpaL 33
                lep++ e+lp L
  MMETSP1325-20131115|3102_1 77 LEPMLIEALPML 88
                444555555554 PP

  == domain 3    score: 13.9 bits;  conditional E-value: 1.7e-05
   PF13513.1   3 vRraAawaLGrlaggeprllepavpellpaLlelLeddddeVReaAawAL 52 
                 +R + + +L ++a  +p  +++ ++ ++p+Ll + +d++ +V+ +A ++L
  MMETSP1325-20131115|3102_1  99 LRVEGCTVLKQAAKACPAVVRTRLEVVVPPLLTAVKDSNVRVKLSAERTL 148
                 68888999988999**********************9999*****99988 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 2.3
   PF13513.1   4 RraAawaLGrl 14 
                 R  A ++L+rl
  MMETSP1325-20131115|3102_1 177 RDYARRVLARL 187
                 44455555443 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.65   2.2e+03      20      30 ..      16      26 ..       9      27 .. 0.84
   2 !    7.5   0.0    0.0013       4.5       4      29 ..      41      66 ..      36      68 .. 0.79
   3 ?   -0.0   0.0      0.33   1.1e+03       2      30 ..      85     113 ..      84     114 .. 0.82
   4 !    8.4   0.1   0.00066       2.3       1      28 [.     125     152 ..     125     154 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.65
                HHHHHHHHHHC CS
  PF02985.17 20 AaeaLgalaev 30
                +a aLg++a +
  MMETSP1325-20131115|3102_1 16 SAIALGRIAMH 26
                6889***9965 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0013
                HHHHHHTSSSHHHHHHHHHHHHHHHH CS
  PF02985.17  4 lllkllnDpspeVReaAaeaLgalae 29
                +l     +++  V  +A+ea+g+l++
  MMETSP1325-20131115|3102_1 41 HLRGFAAHDHQLVQGSACEAIGRLLQ 66
                45555569999*************87 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 0.33
                 HHHHHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17   2 lPlllkllnDpspeVReaAaeaLgalaev 30 
                 lP l     +++++ R   ++ L + a+ 
  MMETSP1325-20131115|3102_1  85 LPMLADVAGHEAADLRVEGCTVLKQAAKA 113
                 79999999999999999888888887765 PP

  == domain 4    score: 8.4 bits;  conditional E-value: 0.00066
                 HHHHHHHHHTSSSHHHHHHHHHHHHHHH CS
  PF02985.17   1 llPlllkllnDpspeVReaAaeaLgala 28 
                 ++P+ll++ +D++ +V+ +A ++L  ++
  MMETSP1325-20131115|3102_1 125 VVPPLLTAVKDSNVRVKLSAERTLLHVL 152
                 68*****************988887765 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.4   6.5e-05      0.22      13      71 ..       9      81 ..       5      84 .. 0.69
   2 !   14.2   2.0     1e-05     0.035      11      87 ..      48     148 ..      42     149 .. 0.77
   3 !   11.3   1.6   8.1e-05      0.28       3      87 ..      87     184 ..      84     185 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 6.5e-05
   PF13646.1 13 dpevraaaieaLgqlgseea..........lpaLlelLkdsdpevRraAaeaLgkl....gdpealpaLlkll 71
                ++   +  + aLg+++  +           +  L+ ++ +++  v+ +A+ea+g+l       +a+++L+ +l
  MMETSP1325-20131115|3102_1  9 EWPRHQGSAIALGRIAMHAGpaalalhpsfMSHLRGFAAHDHQLVQGSACEAIGRLlqaaRKLDAIEPLEPML 81
                555666778888855544222234444444999999*******************865433456888888777 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 1e-05
   PF13646.1  11 dpdpevraaaieaLgqlgse...............ealpaLlelLkdsdpevRraAaeaLgklg..........dpealpaLlklldddedavvreaaaeaL 87 
                 + +  v+ +a+ea+g+l ++               ealp+L +++ ++ +++R + + +L + +           + ++p+Ll + +d++ +v + +a+++L
  MMETSP1325-20131115|3102_1  48 HDHQLVQGSACEAIGRLLQAarkldaieplepmliEALPMLADVAGHEAADLRVEGCTVLKQAAkacpavvrtrLEVVVPPLLTAVKDSNVRV-KLSAERTL 148
                 667889999******7766656666677777788888***********************9985344444443356789*****999888775.88888776 PP

  == domain 3    score: 11.3 bits;  conditional E-value: 8.1e-05
   PF13646.1   3 aLlaaLekdpdpevraaaieaLgqlgse..ea........lpaLlelLkdsdpevRraAaeaLgkl...gd.pealpaLlklldddedavvreaaaeaL 87 
                  L + + +++ +++r + + +L q + +  ++        +p+Ll + kds+ +v+ +A + L  +    + ++ l+  +  +d  + + vr  a + L
  MMETSP1325-20131115|3102_1  87 MLADVA-GHEAADLRVEGCTVLKQAAKAcpAVvrtrlevvVPPLLTAVKDSNVRVKLSAERTLLHVlelNTrNATLDEFVAKADMASARFVRDYARRVL 184
                 555655.888889999999999954433321133444445*******************9999754333551455999999999999999999887776 PP

>> PF12755.2  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.22   7.4e+02       4      60 ..      14      70 ..      12      93 .. 0.66
   2 ?   12.4   0.0   4.2e-05      0.14       6      65 ..     103     163 ..      98     194 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.22
   PF12755.2  4 kggligLaavaialekkvkefleeivkpvlacfsDkd.srvRyyacEslyniakvakg 60
                +g+ i+L  +a+  + ++     ++++ + + f  +d + v   acE++  ++++a++
  MMETSP1325-20131115|3102_1 14 QGSAIALGRIAMHAGPAALALHPSFMSHL-RGFAAHDhQLVQGSACEAIGRLLQAARK 70
                57777777777777777666666666654.4444444145777888887777766654 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 4.2e-05
   PF12755.2   6 gligLaavaialekkvkefleeivkpvlacfsDkdsrvRyyacEslyniakv.akgevlkf 65 
                 g + L  +a a  + v++ le +v+p+l++++D++ rv+  a  +l  ++   ++++ l  
  MMETSP1325-20131115|3102_1 103 GCTVLKQAAKACPAVVRTRLEVVVPPLLTAVKDSNVRVKLSAERTLLHVLELnTRNATLDE 163
                 5666777777777889999*********************999999888765145555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 983.50
//
Query:       MMETSP1325-20131115|3103_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   14.5   0.9      0.056   13.8   0.2    1.8  2  PF04623.7 Adenovirus E1B protein N-terminus


Domain annotation for each model (and alignments):
>> PF04623.7  Adenovirus E1B protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.49   6.7e+03      51      61 ..      29      39 ..       8      46 .. 0.62
   2 ?   13.8   0.2   4.1e-06     0.056      15      52 ..      70     107 ..      67     124 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 0.49
   PF04623.7 51 sdqaaaegGga 61
                +++  ++ Gg+
  MMETSP1325-20131115|3103_1 29 ATVEMVQRGGR 39
                33334444554 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 4.1e-06
   PF04623.7  15 lhshapVEgmeeaaeeenLrLLasaasvsssdgesssd 52 
                 l++++pV ++e   ee++ r + +aas+ + d +s + 
  MMETSP1325-20131115|3103_1  70 LRNQSPVGSVETEREEDGDRAMTGAASTIRDDDASDDA 107
                 78999*****999**************88877744433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 628.48
//
Query:       MMETSP1325-20131115|3105_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-12   44.2   0.2    0.00018   21.1   0.0    4.6  4  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.5   0.0    0.0094   1.3e+02      23      39 .]     128     144 ..      86     144 .. 0.85
   2 !   11.3   0.1   1.6e-05      0.22       2      39 .]     152     188 ..     151     188 .. 0.96
   3 !    3.6   0.0    0.0044        60      15      31 ..     209     225 ..     193     231 .. 0.85
   4 !   21.1   0.0   1.3e-08   0.00018      12      38 ..     254     280 ..     248     281 .. 0.94

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.0094
                 STEEEEEETTSEEEEEE CS
  PF00400.27  23 gpllasgSrDgtirlWd 39 
                 + ll+ g  Dg i+l+d
  MMETSP1325-20131115|3105_1 128 SGLLLAGFGDGAIKLFD 144
                 678999*********98 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 1.6e-05
                 EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   2 eckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 +++a + +H ++V +v  + + +  +sgS  g +r Wd
  MMETSP1325-20131115|3105_1 152 NPVAAFNEHRNWVVSVHLNGT-REAVSGSISGDVRFWD 188
                 68999****************.***************9 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.0044
                 EEEEEESSSTEEEEEET CS
  PF00400.27  15 tcvafspdgpllasgSr 31 
                 t++a +p  p+la+gS+
  MMETSP1325-20131115|3105_1 209 TALAAHPRVPVLATGSH 225
                 78899999********7 PP

  == domain 4    score: 21.1 bits;  conditional E-value: 1.3e-08
                 SSEEEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  12 spVtcvafspdgpllasgSrDgtirlW 38 
                 +pV+c+af+p+ plla g  D+ i ++
  MMETSP1325-20131115|3105_1 254 GPVSCLAFHPNKPLLAAGATDSIISIY 280
                 79**********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.34s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1448.01
//
Query:       MMETSP1325-20131115|3107_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.5   0.0       0.19   11.8   0.0    1.3  1  PF06154.6 YagB/YeeU/YfjZ family


Domain annotation for each model (and alignments):
>> PF06154.6  YagB/YeeU/YfjZ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.4e-05      0.19      23      95 ..     124     195 ..     111     200 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.4e-05
   PF06154.6  23 egnrLhyLadragivGefseaearkldeafpelikqlelmllsgeldpreqkcvtleangltceadtLGsvGy 95 
                 +  rLhyL  ++ ++G++ + ++   +e +++++ q ++    ++ld     +  + a+gl c    +G  Gy
  MMETSP1325-20131115|3107_1 124 NHVRLHYLRKQCDFMGTHHPPSSSTSEEELSSVVLQYDNAG-FTNLDQSAHASSGIVATGLLCVGAVVGLLGY 195
                 6789********************************99875.568999999999999******9999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       635  (0.0464453); expected 273.4 (0.02)
Passed bias filter:                      548  (0.0400819); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.59
# Mc/sec: 852.94
//
Query:       MMETSP1325-20131115|3108_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|3111_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-34  118.4   2.0    3.9e-34  118.3   1.4    1.0  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
      0.015   13.7   0.1      0.019   13.4   0.1    1.1  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.3   1.4   5.6e-38   3.9e-34      74     218 ..       3     142 ..       1     144 [. 0.90

  Alignments for each domain:
  == domain 1    score: 118.3 bits;  conditional E-value: 5.6e-38
                 HHHHHHHC---BBTTTS---SSC-....S--CCCC--C.CCCECEEEEEESS..-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
  PF00112.18  74 afeyikknggivtekdypYkakeg...gkCkkkkkkekevakikgygkvken..seealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                 a+ y+   ggi+t++dypY++  +   g+C+++++k   vak++gy++v+++   e+++++ +a++gP+s+++da+++  ++Y+sG++++  c + +++h v++vG ++e +++yW+v+NSWgt+wGe+GYi+++ gkn  c+++sea+y
  MMETSP1325-20131115|3111_1   3 AYTYLE--GGIETDADYPYTSGARgvtGTCEADSSKF--VAKTTGYTTVSSSasGESTMASYVASTGPLSICVDAETW--SSYTSGIMTH--CGN-SVDHCVQAVGINTEASTPYWLVRNSWGTSWGESGYIQLEYGKN-LCDLASEATY 142
                 566654..7***********55555679***998874..6999999999888778999******************95..9********9..996.9****************************************99.*******988 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   2.8e-06     0.019     358     395 ..      90     125 ..      68     130 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.8e-06
  PF03051.10 358 lmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyf 395
                  ++H +  +g++  ++ ++  w v nsWG   Ge Gy 
  MMETSP1325-20131115|3111_1  90 SVDHCVQAVGIN--TEASTPYWLVRNSWGTSWGESGYI 125
                 345555555555..5778889****************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 771.00
//
Query:       MMETSP1325-20131115|3112_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 557.61
//
Query:       MMETSP1325-20131115|3113_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.6e-25   85.5   1.3    1.2e-24   85.1   0.9    1.1  1  PF13297.1 Telomere stability C-terminal


Domain annotation for each model (and alignments):
>> PF13297.1  Telomere stability C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.1   0.9   8.9e-29   1.2e-24       1      60 []      32      91 ..      32      91 .. 0.98

  Alignments for each domain:
  == domain 1    score: 85.1 bits;  conditional E-value: 8.9e-29
   PF13297.1  1 ldLsafssaeeLeaLgldrLKeaLaalGLKcGGtlqeRAaRLfllkgkkleeldkkllak 60
                ldL++  +++eLea+ ldrLK+aL+ lG+KcGGtl++RA+RL++lkg k+e++d+kllak
  MMETSP1325-20131115|3113_1 32 LDLDKIGDIAELEAMSLDRLKAALMFLGVKCGGTLEQRAERLWSLKGVKREDIDPKLLAK 91
                799*******************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.32s 00:00:00.66 Elapsed: 00:00:00.59
# Mc/sec: 410.22
//
Query:       MMETSP1325-20131115|3114_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 221.88
//
Query:       MMETSP1325-20131115|3116_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-18   66.0   1.2    2.4e-18   65.4   0.8    1.2  1  PF04117.7 Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.8   1.7e-22   2.4e-18       2      67 ..     187     252 ..     186     253 .. 0.98

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 1.7e-22
   PF04117.7   2 sllegksleeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvnlvslgWntyLSlikn 67 
                 sl+egksl+e +++++ + lpt++a++ +W  + +  F +vP++yrv++v++++++W +y+S++++
  MMETSP1325-20131115|3116_1 187 SLMEGKSLDEGWQRVESQALPTMMAGCPFWCSAHAATFGLVPVRYRVVWVQTAAVVWVAYMSWMNQ 252
                 79**************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1241.31
//
Query:       MMETSP1325-20131115|3109_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 694.94
//
Query:       MMETSP1325-20131115|3118_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|3119_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.2e-30  103.9   0.0    8.6e-30  103.6   0.0    1.1  1  PF11940.3 Domain of unknown function (DUF3458)


Domain annotation for each model (and alignments):
>> PF11940.3  Domain of unknown function (DUF3458)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.6   0.0   6.3e-34   8.6e-30     286     367 .]       1      79 [.       1      79 [. 0.98

  Alignments for each domain:
  == domain 1    score: 103.6 bits;  conditional E-value: 6.3e-34
                 HHHHHHHHHT---TTHHHHHHHHHHHTTTT---HHHHHHHHHHHH.T-HHHHT-------HHHHHHHHHHHTT-HHHHHHHG CS
   PF11940.3 286 lDkWfalqasspredalervkallehpaFdlknPNrvRaligaFaaanpaafhaadGsGYrfladqilkldklNpqvAaRll 367
                 l+kWf++qas+ +   le +k+l+ehp+F++ nPNr+R+++  Faaan  +fha dGsGY++la++++k+dk+N q+AaRl+
  MMETSP1325-20131115|3119_1   1 LNKWFSTQASEYD---LEGIKRLTEHPDFTWANPNRMRSVVSIFAAANLCSFHADDGSGYQYLAEVVVKIDKINNQIAARLC 79 
                 69*******9988...8***************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.63
# Mc/sec: 707.50
//
Query:       MMETSP1325-20131115|3121_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.39   10.4   2.7       0.45   10.2   1.5    1.4  1  PF13671.1 AAA domain


Domain annotation for each model (and alignments):
>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.5   3.3e-05      0.45      67     123 ..      17      77 ..      11      93 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 3.3e-05
   PF13671.1  67 lsagrsvivdatnlsreerarfvklakrlgvp....vrivylevpeetlreRlakRerngd 123
                  +ag ++ ++ t ls++ rar++++a++        v+ v ++   ++ ++R+++R ++  
  MMETSP1325-20131115|3121_1  17 TRAGCNCGLRPTRLSPAPRARVRRIAQATPLIntanVHPVDVHLAHDQTERRVRARVETPP 77 
                 689************************7754455558889999999999999999988643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 576.90
//
Query:       MMETSP1325-20131115|3125_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|3126_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-06   26.8   0.1    3.8e-06   26.7   0.1    1.0  1  PF00106.20 short chain dehydrogenase
    0.00066   19.2   0.2     0.0008   19.0   0.1    1.2  1  PF08659.5  KR domain


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.1   5.6e-10   3.8e-06      37      95 ..       3      63 ..       1      68 [] 0.85

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 5.6e-10
                HHHHHHHHHHHHH---EEEEEE--TTSHHHHHHHHHHHH..HH----SEEEEE---TT-TT CS
  PF00106.20 37 apgaaeliaelealgaevtvvacDvadrdalaallaeir..kalgpldgvvhnagvlddgp 95
                + +a++++a+l++lga+v  v cD+ + ++++a+ +++        ld++  nagv++ ++
  MMETSP1325-20131115|3126_1  3 SSRAEAALAKLKELGADVYHVDCDLMSLASVRAAATKVTeiVGSEGLDVLSLNAGVMNMPD 63
                46788888****************9999999999988886668899**********99544 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.1   1.2e-07    0.0008      37      77 ..       2      42 ..       1      63 [. 0.88

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 1.2e-07
                --------HHHHHH----EEEEE--TTSHHHHHHHH----T CS
   PF08659.5 37 pdeeaeallaelealgaevtvvaaDvadrdavealleevea 77
                p+++aea+la+l++lga v +v++D+ + ++v+a+ ++v++
  MMETSP1325-20131115|3126_1  2 PSSRAEAALAKLKELGADVYHVDCDLMSLASVRAAATKVTE 42
                57788999***************************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|3128_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-10   39.1   0.1    5.9e-10   38.5   0.0    1.3  1  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   4.3e-14   5.9e-10      37      86 ..      24      73 .]       7      73 .] 0.89

  Alignments for each domain:
  == domain 1    score: 38.5 bits;  conditional E-value: 4.3e-14
                S--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHH CS
  PF00153.22 37 aasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtye 86
                +a ++ + +gi+da+k+i +e G+ g++rG+ p+l+ ++p+ ai +++ye
  MMETSP1325-20131115|3128_1 24 SAASAPRLNGIIDAVKSIHRESGPFGFFRGFYPRLIVTTPSVAISWTAYE 73
                55667788*****************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 312.38
//
Query:       MMETSP1325-20131115|3123_1  [L=321]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.32s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1479.29
//
Query:       MMETSP1325-20131115|3130_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.047   12.8   0.0      0.066   12.4   0.0    1.2  1  PF03824.11 High-affinity nickel-transport protein
       0.23   11.1   4.3       0.58    9.8   3.0    1.6  1  PF01284.18 Membrane-associating domain


Domain annotation for each model (and alignments):
>> PF03824.11  High-affinity nickel-transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   9.6e-06     0.066      45     132 ..      88     196 ..      79     209 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 9.6e-06
  PF03824.11  45 lghslvqvlvalllvllaklvlrltslsetgatigteisgsfllvigllnllllrkllklfrklrrgrapaadleaalakr.........................gllsril 132
                 ++ +++ v+++ll+++++++ +r      ++a++++   ++++l  +++ ++ +r+ +   ++++++++++ d+e    +r                         +++ r++
  MMETSP1325-20131115|3130_1  88 MAMAALSVVATLLFLSTIVTKKR---CRTVEAVVEFFY-VLLGLCGLFGVWWWWRSSYLNWERVEKKNYQDDDVENDWCSRecqfalagscvslyigvymmvvssgHFMCRLH 196
                 45555556666555555555555...778888999988.9999***************9999999999999998877666667777776666666666666666665555555 PP

>> PF01284.18  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.0   8.5e-05      0.58      44     135 ..      86     188 ..      66     195 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 8.5e-05
  PF01284.18  44 favfvavfsflyalallvlylfknkyftsilwplidlivdalaallwlvafialaaglrgvsca..................fe..snqgsaslkvrcgsaqaavaFgflav 135
                  ++++a++s++++l++l        ++t+++   ++ +v++  +ll l++   ++ ++r+   +                  ++  s ++ + l ++c s+ + v ++ ++ 
  MMETSP1325-20131115|3130_1  86 TTMAMAALSVVATLLFLST------IVTKKRCRTVEAVVEFFYVLLGLCGLFGVWWWWRS---SylnwervekknyqdddveNDwcSRECQFALAGSCVSLYIGVYMMVVSS 188
                 5799999999999999999......99***********************9988888888...3335888888877776664226777888888888888887777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       764  (0.0558806); expected 273.4 (0.02)
Passed bias filter:                      535  (0.0391311); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.39s 00:00:01.01 Elapsed: 00:00:00.51
# Mc/sec: 1240.47
//
Query:       MMETSP1325-20131115|3131_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-24   86.7   0.6    1.4e-24   86.5   0.4    1.0  1  PF01323.15 DSBA-like thioredoxin domain
     0.0001   22.2   0.1    0.00014   21.8   0.1    1.3  1  PF13462.1  Thioredoxin
     0.0083   15.5   0.2       0.81    9.1   0.0    2.1  2  PF02812.13 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
  ------ inclusion threshold ------
      0.055   13.1   0.0      0.079   12.6   0.0    1.4  1  PF00877.14 NlpC/P60 family


Domain annotation for each model (and alignments):
>> PF01323.15  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.5   0.4   4.2e-28   1.4e-24      28     191 ..       7     174 ..       1     176 [. 0.91

  Alignments for each domain:
  == domain 1    score: 86.5 bits;  conditional E-value: 4.2e-28
                 -SEEEEEEE-ST---TTT.....GGG.....STT...HHHHHHHHHHHHHT......TTCCTHHHHHHHHHHHHHHHH...GHHHHHHHHHHHHHTST---SSHHHHHHHHHH----HHHHHHHCTSHHHHHHHHHHHHHHHHTT-----EEEE---EEE--SSSHHHHHHH CS
  PF01323.15  28 pdvkvvlrpfelagakkasgnvgpse.....lpeklkylledlkrlaeaegiplrfpkdklknstraarlllaagaeg...laekvvrelfealwsegqaitddqellevaekaGldaeeldealeseavkeavrentaaaqslgvtGvPtvvvdgkrmvfGadrldtlada 191
                  d++v++rpf l +a+  +g   +++      + + + ++  +k   +a gi++++ ++  +++++ +rl+++a ++g   +++++ +elf+ ++se + ++d+++l+++a k+Gld   +d++++++++ ++  e++ +  ++g+ GvP ++v+   +++Ga++ + +++ 
  MMETSP1325-20131115|3131_1   7 IDFEVRWRPFLLNPAASTKGVNKLQMykekfGEDRVEKMVPMMKAKFAAVGIDYSMGGKT-GSTFDSHRLATYAYQQGgaqMQNQLMEELFMNYFSEEKFLGDPSVLKAAAAKVGLDG--ADAVVDDKNALKEEVETELQTHARGIHGVPHFFVNEY-QISGAQPTEVFQQL 174
                 479************775555556669999988899999999999999********9987.79*****************999*********************************77..99******9999999*********************7.**********9986 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   4.1e-08   0.00014      80     162 ..      90     176 ..      42     177 .. 0.61

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 4.1e-08
   PF13462.1  80 llikallysqqeewaes.....eelaaealgkdeefeacledek.lqalveadseeakaagiestPtfiingkkveenltyeelkalid 162
                 +l+++l+ +  +e +        + aa+++g+d   +a ++d++ l+++v + + ++ a+gi+++P f++n+ +++++++ e +++l +
  MMETSP1325-20131115|3131_1  90 QLMEELFMNYFSEEKFLgdpsvLKAAAAKVGLDG-ADAVVDDKNaLKEEV-ETELQTHARGIHGVPHFFVNEYQISGAQPTEVFQQLFE 176
                 3444444333222222222333333444555553.355565555155555.55556699***********************9999866 PP

>> PF02812.13  Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.1    0.0027       9.3      47      83 ..      39      76 ..      30     102 .. 0.69
   2 !    9.1   0.0   0.00024      0.81      41      87 ..      96     138 ..      81     160 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0027
                HHHHHHHHHHHHHHHHHTTS---.--B---B--GGGS- CS
  PF02812.13 47 eeevkaLarlmtlKnalaglplG.Ggkggikvdpkdls 83
                e+ v+ +  +m+ K a++g+ +  Ggk g  +d + l 
  MMETSP1325-20131115|3131_1 39 EDRVEKMVPMMKAKFAAVGIDYSmGGKTGSTFDSHRLA 76
                5678888889***********987*********65443 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00024
                 -BTT--HHHHHHHHHHHHHHHHHTTS-----B---B--GGGS-HHHH CS
  PF02812.13  41 lhpyvseeevkaLarlmtlKnalaglplGGgkggikvdpkdlsknek 87 
                 +++y see  k+L+    lK+a+a++ l+G+ ++++ ++    k+e 
  MMETSP1325-20131115|3131_1  96 FMNYFSEE--KFLGDPSVLKAAAAKVGLDGADAVVDDKNA--LKEEV 138
                 44455555..9***********************954433..13333 PP

>> PF00877.14  NlpC/P60 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.3e-05     0.079       3      34 ..      59      90 ..      57     142 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.3e-05
  PF00877.14  3 pYrwGGkspsgfDCsglvryafakagielprs 34
                 Y++GGk++s+fD   l  ya+++ g +++++
  MMETSP1325-20131115|3131_1 59 DYSMGGKTGSTFDSHRLATYAYQQGGAQMQNQ 90
                7***********************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.42s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 827.42
//
Query:       MMETSP1325-20131115|3132_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   27.3   0.9    1.8e-06   26.7   0.6    1.3  1  PF00036.27 EF hand
    3.8e-05   23.1   0.1     0.0011   18.3   0.0    2.1  2  PF13833.1  EF-hand domain pair
    4.9e-05   22.7   0.2    8.2e-05   22.0   0.2    1.4  1  PF13405.1  EF-hand domain
    0.00011   21.2   0.7    0.00017   20.6   0.5    1.3  1  PF13202.1  EF hand
    0.00016   21.6   0.0    0.00018   21.4   0.0    1.2  1  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.6   6.4e-10   1.8e-06       1      27 [.      44      70 ..      44      72 .. 0.90

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 6.4e-10
                HHHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealk 27
                elk +F+e+D+D+dG+++++E   +++
  MMETSP1325-20131115|3132_1 44 ELKLIFDEVDTDKDGFLTKDEIGVYFT 70
                7999*****************987766 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.026        71      11      30 ..       4      23 ..       3      23 .. 0.85
   2 !   18.3   0.0   4.1e-07    0.0011      24      53 ..      42      71 ..      28      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.026
   PF13833.1 11 kral.allglkglseeevdil 30
                k+a  +llgl+ +se ev++l
  MMETSP1325-20131115|3132_1  4 KDAWrQLLGLQ-TSEREVQVL 23
                67777899***.******987 PP

  == domain 2    score: 18.3 bits;  conditional E-value: 4.1e-07
   PF13833.1 24 eeevdilfrefDtdgdGkisfeEFcvller 53
                 +e+  +f+e+Dtd+dG ++++E  v+++r
  MMETSP1325-20131115|3132_1 42 TSELKLIFDEVDTDKDGFLTKDEIGVYFTR 71
                578899*****************8888776 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.2     3e-08   8.2e-05       1      27 [.      44      70 ..      44      79 .. 0.86

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 3e-08
                HHH---GCC-------B---HHHHHHH CS
   PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLr 27
                el+ +F+  D+d+dG+++++E++  ++
  MMETSP1325-20131115|3132_1 44 ELKLIFDEVDTDKDGFLTKDEIGVYFT 70
                57779****************988776 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.5   6.1e-08   0.00017       4      20 ..      48      64 ..      45      69 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 6.1e-08
                HHHHH--S----B-HHH CS
   PF13202.1  4 tFrafDlNgDGkIsreE 20
                +F+++D+++DG+++++E
  MMETSP1325-20131115|3132_1 48 IFDEVDTDKDGFLTKDE 64
                7***************9 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   6.5e-08   0.00018       2      27 ..      45      70 ..      16      76 .. 0.86

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 6.5e-08
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllk 27
                lk +F++ D+d+dg+l+k+e+  +++
  MMETSP1325-20131115|3132_1 45 LKLIFDEVDTDKDGFLTKDEIGVYFT 70
                55689999999999999999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|3135_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.9    8.0  14.8        1.1    9.4   1.0    2.1  2  PF11936.3 Domain of unknown function (DUF3454)


Domain annotation for each model (and alignments):
>> PF11936.3  Domain of unknown function (DUF3454)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   4.2    0.0035        48      32      57 ..       8      34 ..       3      39 .. 0.79
   2 ?    9.4   1.0     8e-05       1.1       5      27 ..      59      81 ..      56      87 .] 0.78

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0035
   PF11936.3 32 sylTPSpeSPdqWSssSPhs.vsDWSe 57
                + +TPSp    qW  + Ph  vs+ S 
  MMETSP1325-20131115|3135_1  8 PVPTPSPPPTAQWLTPPPHGaVSEGST 34
                568****************76666554 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 8e-05
   PF11936.3  5 pTPPSqHysssssaeetPkhqlq 27
                 TPPS+H + ++  +  P+h++ 
  MMETSP1325-20131115|3135_1 59 STPPSKHSTLATGFSVPPTHSML 81
                6******7777777999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|3136_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-05   22.5   0.0    2.6e-05   22.5   0.0    1.0  1  PF02055.11 O-Glycosyl hydrolase family 30


Domain annotation for each model (and alignments):
>> PF02055.11  O-Glycosyl hydrolase family 30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   1.9e-09   2.6e-05      68     109 ..      21      62 ..       9      70 .. 0.87

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 1.9e-09
                 -TTS---B---------HHHHHHHHTS-HHHHHHHHHHHHS- CS
  PF02055.11  68 dsskkyqkikGfGstlsdasganlkslsdkladlilkqyfsd 109
                 d s   q+i GfG++ +da+   + sls ++++++l++ f +
  MMETSP1325-20131115|3136_1  21 DQSGDRQTIDGFGAAWTDATVTVFDSLSAEAQETLLQELFGE 62 
                 667788*********************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 369.87
//
Query:       MMETSP1325-20131115|3139_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|3140_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 524.20
//
Query:       MMETSP1325-20131115|3138_1  [L=442]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-74  251.4   2.8    1.4e-74  251.2   1.9    1.0  1  PF01602.15 Adaptin N terminal region
      5e-06   26.3   1.5    1.1e-05   25.1   1.0    1.6  1  PF12717.2  non-SMC mitotic condensation complex subunit 1
    0.00014   21.9   0.2     0.0086   16.2   0.0    3.5  4  PF13646.1  HEAT repeats
  ------ inclusion threshold ------
      0.016   15.4   2.3       0.09   13.0   0.1    2.9  3  PF12755.2  Vacuolar 14 Fab1-binding region
      0.016   15.0   2.3       0.18   11.8   0.0    3.6  4  PF02985.17 HEAT repeat
      0.019   14.7   0.2       0.15   11.8   0.0    2.6  3  PF10363.4  Protein of unknown function (DUF2435)
       0.02   14.3   3.7       0.36   10.2   0.1    3.3  3  PF08623.5  TATA-binding protein interacting (TIP20)
      0.043   13.4   1.9         13    5.5   0.0    4.1  5  PF12460.3  NER and RNAPII transcription protein n terminal
      0.075   12.2   0.0       0.15   11.3   0.0    1.4  1  PF10899.3  Protein of unknown function (DUF2743)


Domain annotation for each model (and alignments):
>> PF01602.15  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.2   1.9   9.2e-78   1.4e-74     165     520 ..       4     391 ..       1     393 [. 0.95

  Alignments for each domain:
  == domain 1    score: 251.2 bits;  conditional E-value: 9.2e-78
  PF01602.15 165 gVvlaAvalleei.kkndrlll...kllpklvrrLcnll...........telnpwlqvkiiklltrlarqepeerskkellesllnllq.......ssnnaVlletvklivelapknelivlavnaLvrllsskdenlryvaLrnlnkileke.kavq.hkdlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvsevadeefksklvkaIgrlaekfatdaewvldvllellslsgeyvkdeivevirdiiqkvpelhekivekLaellek.iespearaaaiWllGeygelven...............te.sasdllrslaekfvlesekvklailtalvKlsltspdketqeeliqlvlslatqdssdlelrdRaveylqlls 520
                  V+ ++v+l+ e+ +++++ +    +l+p+lvr L+nll           ++++p+lqvk+++ll+ l + ++e++   + ++++l++++       +++na+l+e+vk+i++++ ++ l+vlavn+L+r+l ++d+n+ryvaL +l+k+++ + ++vq h+ +++++lk d+d+sir++al+l+++lv+ +Nv  +++e+++y+  va ++ ks l ++I +  +kf ++ +w +d+l+ +ls++g++ +++i ++  + i++ ++l++++v k++ ll++  +++++    iW++Geyg+l+ +               t  ++ dll++  +++ ++s+ +k+ +lt+++Kls +   +e  ++++q+++++ +  s d el++R++e + +l+
  MMETSP1325-20131115|3138_1   4 AVLITSVQLMIEMvEQDPSQAEgfaRLVPSLVRLLKNLLsmgyspehdvaGITDPFLQVKLLRLLQLLGKGNDEAS---DAMNDILAQVAtntetakNAGNAILYECVKAIMTIEAESGLRVLAVNILGRFLLNRDNNIRYVALHTLSKVVTDDiDTVQrHRATIVDCLK-DPDISIRQRALELIYQLVTTKNVVDLMREMLNYL-VVASGDQKSSLCSKIMITVDKFSPSRRWQIDTLITMLSIAGNSCDESIGSNTVMYISQAEDLQQYVVHKIFSLLQDdKSQQALMHIGIWCIGEYGNLLIQdcpalddetptmpaqTPgQVIDLLEDCKKVHNSTSA-TKSLVLTTFMKLSHRLGGAEL-PRITQFIEQFKD--SMDTELQQRSCEFSCMLE 391
                 6888899999999655555555899*********************************************888888...68*****************************************************************************************.**********************************.888999**********************************************************************88888899999**********9999*************98899*******9999999998.****************98877.7***********..99*********9987775 PP

>> PF12717.2  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   1.0   7.5e-09   1.1e-05      30     147 ..     128     287 ..     123     290 .. 0.81

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 7.5e-09
   PF12717.2  30 lyacLkdedalvRktallvlshLiledmvKvkgqlflemlkllaDedeeiralAelffsellkkknpnllynllpelisvLnnctehelv..............................................eeldeerrkkiyrfllefikkdkqkesl 147
                 l ++L ++d+ +R++al +ls+ +  d+  v+ +    ++ +l D+d  ir+ A  ++ +l+ +   ++++ l+ e++ +L   + ++++                                               ++ e+  +++++ +++ +++dk++++l
  MMETSP1325-20131115|3138_1 128 LGRFLLNRDNNIRYVALHTLSKVVTDDIDTVQRHR-ATIVDCLKDPDISIRQRALELIYQLVTT---KNVVDLMREMLNYLVVASGDQKSslcskimitvdkfspsrrwqidtlitmlsiagnscdesigsntvmyISQAEDLQQYVVHKIFSLLQDDKSQQAL 287
                 5688999****************************.***************************9...5588888888888887777777677889999988888888888888888887777777777777777774466677777777777777777666655 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       3.1   4.7e+03      31      41 ..      29      39 ..      15      41 .. 0.77
   2 ?    4.0   0.0     0.035        52      35      79 ..     107     159 ..      55     164 .. 0.51
   3 !   16.2   0.0   5.6e-06    0.0086      10      71 ..     133     201 ..     108     204 .. 0.79
   4 ?    0.8   0.0      0.36   5.4e+02      13      59 ..     249     299 ..     234     313 .. 0.64

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 3.1
   PF13646.1 31 ealpaLlelLk 41
                +++p L++lLk
  MMETSP1325-20131115|3138_1 29 RLVPSLVRLLK 39
                56888888886 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.035
   PF13646.1  35 aLlelLk.dsdpevRraAaeaLgkl...gdpe....alpaLlklldddedavv 79 
                 ++ + ++   ++ +R  A++ Lg++    d++    al +L k  +dd d+v 
  MMETSP1325-20131115|3138_1 107 CVKAIMTiEAESGLRVLAVNILGRFllnRDNNiryvALHTLSKVVTDDIDTVQ 159
                 33344432334445556666666654432222223355666666665555554 PP

  == domain 3    score: 16.2 bits;  conditional E-value: 5.6e-06
   PF13646.1  10 kdpdpevraaaieaLgqlgseea......lpaLlelLkdsdpevRraAaeaLgkl.gdpealpaLlkll 71 
                  + d+++r  a+++L++  ++++       ++++++Lkd+d ++R+ A+e + +l  ++++++ ++++l
  MMETSP1325-20131115|3138_1 133 LNRDNNIRYVALHTLSKVVTDDIdtvqrhRATIVDCLKDPDISIRQRALELIYQLvTTKNVVDLMREML 201
                 36777888888888886655544566666***********************99747889999999987 PP

  == domain 4    score: 0.8 bits;  conditional E-value: 0.36
   PF13646.1  13 dpevraaaieaLgqlgseea..lpaLlelLkdsd..pevRraAaeaLgklg 59 
                 d+++  +++++++q ++ +   + ++++lL+d+    ++ +  ++++g++g
  MMETSP1325-20131115|3138_1 249 DESIGSNTVMYISQAEDLQQyvVHKIFSLLQDDKsqQALMHIGIWCIGEYG 299
                 555666777777777765333488999999776512345555556666655 PP

>> PF12755.2  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.32   4.9e+02      34      54 ..     130     150 ..      95     158 .. 0.69
   2 ?   13.0   0.1   5.9e-05      0.09      30      83 ..     163     214 ..     142     224 .. 0.84
   3 ?   -2.1   0.0       3.1   4.6e+03      19      41 ..     261     283 ..     252     285 .. 0.75

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.32
   PF12755.2  34 acfsDkdsrvRyyacEslyni 54 
                 + +  +d+ +Ry a  +l  +
  MMETSP1325-20131115|3138_1 130 RFLLNRDNNIRYVALHTLSKV 150
                 456789999***998777655 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 5.9e-05
   PF12755.2  30 kpvlacfsDkdsrvRyyacEslyniakvakgevlkflneifdalcklvaDsdes 83 
                 +++++c++D+d  +R  a E +y ++  + ++v+  + e+ ++l+  + D+++s
  MMETSP1325-20131115|3138_1 163 ATIVDCLKDPDISIRQRALELIYQLV--TTKNVVDLMREMLNYLVVASGDQKSS 214
                 5799*******************996..6789999*********9999998876 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 3.1
   PF12755.2  19 kkvkefleeivkpvlacfsDkds 41 
                 +++++  + +v+ +++ ++D+ s
  MMETSP1325-20131115|3138_1 261 SQAEDLQQYVVHKIFSLLQDDKS 283
                 45677788899999999998765 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       7.1   1.1e+04       1      10 [.      30      39 ..      30      40 .. 0.82
   2 ?    0.5   0.0       0.5   7.6e+02       9      27 ..     132     150 ..     121     153 .. 0.75
   3 ?   11.8   0.0   0.00012      0.18       5      28 ..     165     188 ..     163     190 .. 0.92
   4 ?   -3.4   0.0         9   1.4e+04       5      12 ..     274     281 ..     271     284 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 7.1
                HHHHHHHHHT CS
  PF02985.17  1 llPlllklln 10
                l+P l++ll+
  MMETSP1325-20131115|3138_1 30 LVPSLVRLLK 39
                6899999986 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.5
                 HTSSSHHHHHHHHHHHHHH CS
  PF02985.17   9 lnDpspeVReaAaeaLgal 27 
                 l   + ++R+ A+ +L+ +
  MMETSP1325-20131115|3138_1 132 LLNRDNNIRYVALHTLSKV 150
                 5566788999999999876 PP

  == domain 3    score: 11.8 bits;  conditional E-value: 0.00012
                 HHHHHTSSSHHHHHHHHHHHHHHH CS
  PF02985.17   5 llkllnDpspeVReaAaeaLgala 28 
                 ++ +l+Dp+ ++R+ A+e + +l+
  MMETSP1325-20131115|3138_1 165 IVDCLKDPDISIRQRALELIYQLV 188
                 789******************997 PP

  == domain 4    score: -3.4 bits;  conditional E-value: 9
                 HHHHHTSS CS
  PF02985.17   5 llkllnDp 12 
                 + +ll+D+
  MMETSP1325-20131115|3138_1 274 IFSLLQDD 281
                 67899997 PP

>> PF10363.4  Protein of unknown function (DUF2435)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         2     3e+03      58      65 ..      57      64 ..       9      94 .. 0.57
   2 ?   -1.1   0.0       1.1   1.6e+03      20      36 ..     139     155 ..     132     166 .. 0.77
   3 ?   11.8   0.0    0.0001      0.15       7      44 ..     163     198 ..     157     213 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 2
   PF10363.4 58 dsfvYLna 65
                d+f+ ++ 
  MMETSP1325-20131115|3138_1 57 DPFLQVKL 64
                44444444 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 1.1
   PF10363.4  20 vrahgLllLrrlvekks 36 
                 +r  +L++L+++v+++ 
  MMETSP1325-20131115|3138_1 139 IRYVALHTLSKVVTDDI 155
                 88899******999876 PP

  == domain 3    score: 11.8 bits;  conditional E-value: 0.0001
   PF10363.4   7 kkalkslqdplvPvrahgLllLrrlvekksaedvadvp 44 
                  ++++ l+dp +++r ++L l+ +lv++k+   v  + 
  MMETSP1325-20131115|3138_1 163 ATIVDCLKDPDISIRQRALELIYQLVTTKN--VVDLMR 198
                 568899**********************99..444444 PP

>> PF08623.5  TATA-binding protein interacting (TIP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   0.00024      0.36      48     112 ..     105     170 ..     102     172 .. 0.84
   2 ?    3.1   0.2     0.037        56      38      92 ..     171     223 ..     169     286 .. 0.73
   3 ?   -0.3   0.0       0.4   6.1e+02      33      51 ..     371     389 ..     340     399 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00024
   PF08623.5  48 yetlytlLetalskldiaelleriiaGLkD.eedikllallmlsklaslapeeilarldalaealk 112
                 ye++ +++++  +       ++++   L   +++i+ +al++lsk+++ +++ ++++  ++++ lk
  MMETSP1325-20131115|3138_1 105 YECVKAIMTIEAESGLRVLAVNILGRFLLNrDNNIRYVALHTLSKVVTDDIDTVQRHRATIVDCLK 170
                 9******997665554444588888889988**************************988888886 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.037
   PF08623.5  38 DdGLelRKlayetlytlLetalskldiaelleriiaGLkDeedikllallmlskl 92 
                 D  +++R+ a e++y+l++t+     ++e+l+ ++    D++    l+  ++  +
  MMETSP1325-20131115|3138_1 171 DPDISIRQRALELIYQLVTTKNVVDLMREMLNYLVVASGDQKS--SLCSKIMITV 223
                 55689************87766555578888888888888553..3444443333 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 0.4
   PF08623.5  33 FkhkvDdGLelRKlayetl 51 
                 Fk  +D  L+ R + + ++
  MMETSP1325-20131115|3138_1 371 FKDSMDTELQQRSCEFSCM 389
                 6777777777777777776 PP

>> PF12460.3  NER and RNAPII transcription protein n terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.027        41      38      61 ..     128     151 ..     123     153 .. 0.90
   2 ?    5.5   0.0    0.0085        13      41      57 ..     168     184 ..     166     188 .. 0.91
   3 ?   -2.9   0.0       3.5   5.3e+03      30      42 ..     192     204 ..     190     205 .. 0.78
   4 ?   -1.2   0.0         1   1.5e+03      16      33 ..     262     279 ..     255     283 .. 0.57
   5 ?   -3.4   0.0       4.9   7.4e+03      31      44 ..     364     377 ..     363     378 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.027
   PF12460.3  38 LGeyLtsedpeiRakavelLsevL 61 
                 LG  L + d++iR  a++ Ls+v 
  MMETSP1325-20131115|3138_1 128 LGRFLLNRDNNIRYVALHTLSKVV 151
                 9999*****************995 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0085
   PF12460.3  41 yLtsedpeiRakavelL 57 
                 +L ++d +iR++a+el+
  MMETSP1325-20131115|3138_1 168 CLKDPDISIRQRALELI 184
                 799************97 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 3.5
   PF12460.3  30 tLldlVesLGeyL 42 
                 +++dl++++ +yL
  MMETSP1325-20131115|3138_1 192 NVVDLMREMLNYL 204
                 5788999988888 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 1
   PF12460.3  16 sadqiaelvengkltLld 33 
                  a+++ + v+++ ++Ll+
  MMETSP1325-20131115|3138_1 262 QAEDLQQYVVHKIFSLLQ 279
                 445555556666666654 PP

  == domain 5    score: -3.4 bits;  conditional E-value: 4.9
   PF12460.3  31 LldlVesLGeyLts 44 
                 + +++e+ ++++ +
  MMETSP1325-20131115|3138_1 364 ITQFIEQFKDSMDT 377
                 77999999988865 PP

>> PF10899.3  Protein of unknown function (DUF2743)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   9.6e-05      0.15      66     148 ..     254     402 ..     250     425 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 9.6e-05
   PF10899.3  66 lnPVlYvlensellkslrell.kklddvneqe...............................................................fkeetqskleenlelilayiktfdgseyknkkyv..kksfyderEWRsvpnfde 148
                  n V+Y++++ +l + + + + + l+d+++q+                                                               f +  +     +l  i ++i +f++s+ ++ ++   ++s + e EW s+     
  MMETSP1325-20131115|3138_1 254 SNTVMYISQAEDLQQYVVHKIfSLLQDDKSQQalmhigiwcigeygnlliqdcpalddetptmpaqtpgqvidlledckkvhnstsatkslvlttFMKLSHRLGGAELPRITQFIEQFKDSMDTELQQRscEFSCMLEAEWDSIRPTAL 402
                 57799999999998876555505555555555999999999999999999999999999999999999999999999999999999999999999999999999******************885444456**********99976644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.86u 0.36s 00:00:01.22 Elapsed: 00:00:00.66
# Mc/sec: 1604.83
//
Query:       MMETSP1325-20131115|3141_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 612.91
//
Query:       MMETSP1325-20131115|3142_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-08   32.9   1.3    5.6e-07   29.5   0.9    1.9  1  PF00106.20 short chain dehydrogenase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.9   4.1e-11   5.6e-07      81     162 ..       3     102 ..       1     104 [] 0.80

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 4.1e-11
                 -SEEEEE---............TT-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH...HH---EEEEEECHHHHS...STT.HHHHHHHCHHHCCHHHH CS
  PF00106.20  81 ldgvvhnagv............lddgpleeltperlervlapkvtgawllheltld...adlgafvlfSSvagvlg...spgqaaYaaakaaldalaesr 162
                 ld+vvhnag             + d+ le+++ +r+++ ++++  g + + +++l+   +++g + ++S + + +g   s g  aY ++kaa++++a+s+
  MMETSP1325-20131115|3142_1   3 LDVVVHNAGSlngtreltgmavMSDQKLENVSMDRMRAAFEVNTLGPLRVQQAVLPmmrSPGGKIAIISTGLASIGdnsSGGNYAYRSSKAAVNMIAKSM 102
                 7888888887555555555554568888888*************************997779***9999876655432277888899**********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|3143_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-18   65.4   0.0    3.9e-18   65.1   0.0    1.2  1  PF05935.6 Arylsulfotransferase (ASST)
    8.2e-15   54.6   0.6    1.3e-14   53.9   0.4    1.3  1  PF14269.1 Arylsulfotransferase (ASST)


Domain annotation for each model (and alignments):
>> PF05935.6  Arylsulfotransferase (ASST)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0   5.7e-22   3.9e-18     243     452 ..       7     205 ..       2     221 .. 0.74

  Alignments for each domain:
  == domain 1    score: 65.1 bits;  conditional E-value: 5.7e-22
   PF05935.6 243 kiLdpyrdallk..dlkepfgdi.agvg.ggrdWlHiNsveydekddsiivSsRhqsavvkidyrtkkvkWilgdkegWskelqkklLtpvdeegdfdwtwgqHtavlipngtiielmvFDNgdgrskeqpalaspkdnySraveYkideknmTveqvweygkerGaefYSsivssveylsdkgnilvdsglagld..........engkkleaeiievdaktk 452
                 + Ldp  d      + ++p++d  +g++ +  dW+H Nsv++ +  d+ ++S+Rh sa++ i + t k+ W l+++ + + +     +     +++ + ++ qH++   +ng   +lm+FDNg++r++ q       + +Sr+ + + d +n+ ++   e+        Y++  +s+  l   gn++ ++ + +            ++g+++++++ e+d +++
  MMETSP1325-20131115|3143_1   7 DYLDPVTDRGYLsdNGMNPYNDEcNGTDtSLSDWTHLNSVSVGA-FDNYLISVRHLSAIMSISRTTFKLLWTLSSEIDSDFT-----F-----ASEASKFYDQHAVLQAENG---DLMLFDNGNARTQYQ-----GGSDFSRGLILSMDYENKVASLKTEFVGA-----YTDHEGSTYQLDS-GNYVTCFPAGDGGdlngclpgghAEGSASTTKVYEYDIDGS 205
                 56666655322233224444443133332678*********988.888999***********************99876655.....3.....4688999************...9*************8.....5556**********************987.....******9766666.99998874433222445555554444444445555555555 PP

>> PF14269.1  Arylsulfotransferase (ASST)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.4   1.9e-18   1.3e-14     135     264 ..      32     158 ..      17     212 .. 0.85

  Alignments for each domain:
  == domain 1    score: 53.9 bits;  conditional E-value: 1.9e-18
   PF14269.1 135 rdeskpedyfHlNsvekfedgdyLiSlrelsslflirpkegkvlWqlqGpkggdfel..dnstfsrQHdariveetedkivislfnNentdt...nerepttglildvdlqnkevtllrklkdaedeissvsqGs 264
                 ++++  +d  HlNsv   +  +yLiS+r+ls ++ i+ ++ k+lW+l+ +  +df++  + s+f  QH +       ++  + lf+N n+ t    +   ++glil++d +nk+++l  ++       ++  +Gs
  MMETSP1325-20131115|3143_1  32 GTDTSLSDWTHLNSVSVGAFDNYLISVRHLSAIMSISRTTFKLLWTLSSEIDSDFTFasEASKFYDQHAVLQA----ENGDLMLFDNGNARTqyqGGSDFSRGLILSMDYENKVASLKTEFV----GAYTDHEGS 158
                 5677889********8777779***************999**********99******999*******99887....9999******8888888899999****************999987....334444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1240.97
//
Query:       MMETSP1325-20131115|3147_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-25   87.5   0.5    4.6e-25   87.2   0.3    1.1  1  PF00439.20 Bromodomain
  ------ inclusion threshold ------
      0.031   13.8   0.1      0.038   13.5   0.1    1.1  1  PF07882.7  L-fucose isomerase, second N-terminal domain


Domain annotation for each model (and alignments):
>> PF00439.20  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.3   6.8e-29   4.6e-25       2      83 ..      14      95 ..      13      96 .. 0.97

  Alignments for each domain:
  == domain 1    score: 87.2 bits;  conditional E-value: 6.8e-29
  PF00439.20  2 eqilndlqehklastFsapvdakeapdYydiikrPidLktIqkklasgkyqslaqfekdlelvfsNavkyneegsdvyedar 83
                + i++d+ +h+ + +F++pvd++e++dY ++ik PidL+ I+++l++++y+s + +++dl+++++N++ yn+++++ y++a+
  MMETSP1325-20131115|3147_1 14 RAIWKDVEKHDASWPFQEPVDTREVEDYLTVIKDPIDLSKIKQRLDDKYYKSKEMLKADLMRMIENCKLYNGQRTVFYKEAE 95
                6799***************************************************************************997 PP

>> PF07882.7  L-fucose isomerase, second N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   5.5e-06     0.038      18      72 ..      33      88 ..      30     108 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5.5e-06
   PF07882.7 18 vdpdffeeylgirvesvDqteivrrieeeiydeeevekA.leWieenvkegedknp 72
                vd+   e+yl +  + +D + i++r++ + y ++e+ kA l  + en+k +++++ 
  MMETSP1325-20131115|3147_1 33 VDTREVEDYLTVIKDPIDLSKIKQRLDDKYYKSKEMLKAdLMRMIENCKLYNGQRT 88
                688899***************************99988856778899999998874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       438  (0.0320363); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 537.96
//
Query:       MMETSP1325-20131115|3148_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   13.0   0.0      0.072   12.8   0.0    1.2  1  PF12697.2 Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   5.3e-06     0.072     162     227 ..      99     180 ..      18     181 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 5.3e-06
                 G..............------H.HHHTT--S-EEEEE-----HHHHHHHHHHHHHSTTEEEEE---S.SSS-...-HHHHHH CS
   PF12697.2 162 a..............lldadlr.ealarldvPvlviageaDrvvppeearrlaealpgarvvvlpga.gHllfleapdevae 227
                                ++++++  +al+  +vP+  + + +D +v  e  ++ a+ l+++ vv++ +   H++  + p++v e
  MMETSP1325-20131115|3148_1  99 LqglgecaeilaeknDWGRLYDlDALQDTSVPCAALISYEDIYVEREFSEETARLLGDKCVVWITNEfQHSGLRDCPKKVFE 180
                 1222223344455555777774499999********************************9999974499999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1279.76
//
Query:       MMETSP1325-20131115|3144_1  [L=371]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   13.6   0.7      0.053   12.7   0.5    1.4  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.5   3.9e-06     0.053     235     337 ..     162     273 ..     124     305 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.9e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX...............................................................XXXXXXXXXXXHHHHHH...... CS
  PF04652.11 235 ssspgvpsfpspdeseasnkdsqlPsaPty...........aqknssssqsvfPpsseeeetssssppsteapssppvqapsapakpslssakPtaqsassaqaqplqsvapqi 337
                  ++ g ps++sp++++ s+++ + ++  +            ++  ++ + s++P +s + e+s+s+    ++p+++++++ +  + +  + ++  +q++   q+q+lq+ ++ +
  MMETSP1325-20131115|3144_1 162 GEDFGAPSSSSPANTSPSPQEGSGSERGQGargeggdgdgdGDGDEAGKGSKQPVESMGLEHSPSP--GLDTPTPTSQGIAHVQIAQLEQMKQQMQQQQAFRQHQQLQRLQQLQ 273
                 222222222222222222222222222222444555567776677777889999999988888888..6677777777777766666555555555555555666666555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1145  (0.0837478); expected 273.4 (0.02)
Passed bias filter:                      567  (0.0414716); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.41s 00:00:01.29 Elapsed: 00:00:00.57
# Mc/sec: 1532.84
//
Query:       MMETSP1325-20131115|3145_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-06   25.4   0.0    8.2e-06   24.6   0.0    1.4  1  PF00036.27 EF hand
     0.0003   19.8   0.0    0.00047   19.2   0.0    1.3  1  PF13202.1  EF hand
    0.00059   19.2   0.1     0.0014   18.0   0.0    1.6  2  PF13833.1  EF-hand domain pair
     0.0014   18.6   0.0     0.0019   18.2   0.0    1.2  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.032   14.0   0.0      0.058   13.1   0.0    1.4  1  PF13405.1  EF-hand domain
      0.069   12.3  29.1      0.092   11.9  20.2    1.3  1  PF07174.6  Fibronectin-attachment protein (FAP)
       0.99    7.1  17.5        1.1    7.0  12.1    1.0  1  PF05109.8  Herpes virus major outer envelope glycoprotein (BLLF1)


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   4.2e-09   8.2e-06       2      25 ..      35      58 ..      34      61 .. 0.93

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 4.2e-09
                HHHHHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkea 25
                lk +F+++D+++dG +sf E++ +
  MMETSP1325-20131115|3145_1 35 LKTMFDLADTNKDGLVSFPELLMM 58
                799******************988 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.4e-07   0.00047       1      21 [.      35      55 ..      35      59 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 2.4e-07
                HHHHHHHH--S----B-HHHH CS
   PF13202.1  1 lkdtFrafDlNgDGkIsreEL 21
                lk +F+ +D+N+DG +s+ EL
  MMETSP1325-20131115|3145_1 35 LKTMFDLADTNKDGLVSFPEL 55
                5678****************9 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   7.1e-07    0.0014      27      47 ..      35      55 ..      23      59 .. 0.89
   2 ?   -2.9   0.0       2.5   4.8e+03      15      27 ..     175     187 ..     169     191 .. 0.69

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 7.1e-07
   PF13833.1 27 vdilfrefDtdgdGkisfeEF 47
                + ++f+++Dt++dG +sf E 
  MMETSP1325-20131115|3145_1 35 LKTMFDLADTNKDGLVSFPEL 55
                569***************996 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 2.5
   PF13833.1  15 allglkglseeev 27 
                 ++ +++++++eev
  MMETSP1325-20131115|3145_1 175 KAGKVEHIEDEEV 187
                 5556777889886 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   9.6e-07    0.0019      36      63 ..      33      56 ..       9      59 .. 0.77

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 9.6e-07
   PF13499.1 36 eevrevldyifkelDkngdGvlsfeEfl 63
                  ++++    f+ +D+n+dG++sf+E+l
  MMETSP1325-20131115|3145_1 33 TALKTM----FDLADTNKDGLVSFPELL 56
                344555....****************98 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     3e-05     0.058       2      25 ..      35      58 ..      34      62 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3e-05
                HH---GCC-------B---HHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrda 25
                l+  F+l D+++dG +++ EL+ +
  MMETSP1325-20131115|3145_1 35 LKTMFDLADTNKDGLVSFPELLMM 58
                6789****************9876 PP

>> PF07174.6  Fibronectin-attachment protein (FAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9  20.2   4.7e-05     0.092      25      92 ..      66     137 ..      23     183 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.7e-05
   PF07174.6  25 gasavalalPavanadPePaPs....apPstaaaaPapaapvae.papaaapapapadpnaaaPpapadPnap 92 
                 + ++va a Pa+a a P+ a +    a+P++aaaaPa aap a+ +apaa papa +++ a+aP+ ++  +a+
  MMETSP1325-20131115|3145_1  66 ANAVVAAAAPATAVAAPTTAVAaptaAAPAAAAAAPAVAAPAATaAAPAAVPAPATTEAAAPAPA-ATTTEAT 137
                 33345566666666666533221224668888888887776544145666665444444444443.2222222 PP

>> PF05109.8  Herpes virus major outer envelope glycoprotein (BLLF1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  12.1   0.00056       1.1     430     537 ..      50     152 ..      21     189 .. 0.57

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00056
   PF05109.8 430 ksvitlytlvfvepnkttalpsstslppvssaptvstedptsttptGttssklpevtsPtsavtsatpnatsptsvvttpnatsptlqktsdtpnatspttvvigsts 537
                  s + l  +  ++p  + a+ +++    + +apt   + pt++ p+  ++  +p v+ P+++++++   a+ p++++t   a  p+++ t  t  +   + vv+   +
  MMETSP1325-20131115|3145_1  50 VSFPELLMMYPAAPAAANAVVAAAAPATAVAAPTTAVAAPTAAAPAAAAA--APAVAAPAATAAAP---AAVPAPATTEAAAPAPAATTTEATAKDVFGAGVVTDKEA 152
                 34455555556667777776666655566677777777777777777444..66666665554433...455555555555555555555555555555555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       817  (0.0597572); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.66u 0.40s 00:00:01.06 Elapsed: 00:00:00.55
# Mc/sec: 845.26
//
Query:       MMETSP1325-20131115|3133_1  [L=505]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-91  303.9   2.9    5.5e-91  303.6   2.0    1.1  1  PF12317.3 Intraflagellar transport complex B protein 46 C terminal
  ------ inclusion threshold ------
       0.69    7.9  11.7          1    7.4   8.1    1.2  1  PF10577.4 Uncharacterised protein family UPF0560


Domain annotation for each model (and alignments):
>> PF12317.3  Intraflagellar transport complex B protein 46 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.6   2.0   8.1e-95   5.5e-91       1     214 []     250     461 ..     250     461 .. 0.99

  Alignments for each domain:
  == domain 1    score: 303.6 bits;  conditional E-value: 8.1e-95
   PF12317.3   1 gaydpadyenlevssevkelfkyitrykpeeveleaklkPFipdyiPavGdvDafiKvpRPDgkddklGltvlDEPaaeqsdpavldlklrelskeaaaekavvvksledaeknpkkidkwiesikelhkkkpaatvaYskkmpdieelmqewpqeieevlksvklpsaeldldlkeyvklicailDiPvkksliesLHvlFtlysefknnqhf 214
                 gay+++d+++l+vs+e+k+lf+yi+rykp+evel++ lk Fipd+iPavG++DafiKvp PDg+ d+lGl+vlDEP+a+qsd++vl+l+lr++sk+  ++ +v+v+s+e+a+k p++i+kwi+si++lh++kp+   +Y+k+mpdie+lmqewp+e+ee+l++++lp  +++l+l+ey+k+icai+D+Pv+++liesLHv+F+ly+efk+n+hf
  MMETSP1325-20131115|3133_1 250 GAYNANDFKHLQVSAEIKDLFQYIQRYKPHEVELDTTLKCFIPDFIPAVGEMDAFIKVPSPDGNRDELGLKVLDEPSAHQSDSTVLELQLRAISKK--QHGDVAVRSIENAAKSPAEIEKWIKSIEDLHRQKPSVDYQYKKNMPDIESLMQEWPEEFEEMLQKTTLPGPDMELSLEEYAKVICAIMDVPVYDNLIESLHVIFSLYMEFKDNPHF 461
                 68******************************************************************************************9999..7799***************************************************************************************************************9 PP

>> PF10577.4  Uncharacterised protein family UPF0560
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   8.1   0.00015         1     663     789 ..     114     242 ..      87     245 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00015
   PF10577.4 663 asLdsgvdvnElksarklretdreereqakekkaakstaytklvyledldqssSEsrttvc.sPedssLrplldegskksv.eqaasleeergrsssdssaeslsspekesnardedeldddseddade 789
                    d  +d+ E +++    ++d +  + ak +  +k++ y   v ++ +  +s Es + +  sP++s+  ++ ++gs   + ++aa+  + r+++++   a+s+s p++  +++d+++++++sed++ e
  MMETSP1325-20131115|3133_1 114 QAHDEALDLSESHVSPTSYNMDAKADRDAKGEGPEKNKPYDEAVDIDGSSDGSDESSVDTNaSPKNSAPPTAQAKGSGGPMgSSAAAQAQPRTQQTATATAQSASRPSPAAGRTDDESSEEESEDESHE 242
                 4458899********9999999888888899999999***********99999999987766*****998888777766551566667788899999999**************999999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       792  (0.0579286); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.95u 0.38s 00:00:01.33 Elapsed: 00:00:00.59
# Mc/sec: 2051.12
//
Query:       MMETSP1325-20131115|3149_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-10   41.8   0.0    1.5e-10   41.2   0.0    1.3  1  PF00300.17 Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   1.1e-14   1.5e-10       1     157 [.      23     192 ..      23     193 .. 0.65

  Alignments for each domain:
  == domain 1    score: 41.2 bits;  conditional E-value: 1.1e-14
                 EEEEEE---BHCCCTTBGGGTCC--...........B-----HHHHHHHTHHHHTTHCESEEEEESSHHHHHHHHHHCCCCEEEEEE.GGGSHHHH----TTCHHHHHHHHHCHHHHHHHHCCTSTTTSS.CHHHHHHHHHHHHHHHHH........HCTTTSEEEEEE-TTHHHH CS
  PF00300.17   1 rlylvRHGeselnkegrlqgwsdvp...........LtekGreqarelgkkLkradlqidavytSplkRaiqTaeilleeldipiiqeprLrerdfgeweglpkaevkeelpeeyekwkrdkkefrppegesladvyeRvapfleelie........akdkgenvlivsHggvlra 157
                 rl++vRH+ s   + +   ++ d+p           Lt+kG+eq +++ +++   +l++ a+ +Sp +Ra +Ta +++++++++ +q + L  r +   e  + a ++e +++++e +  ++ +   + +e  a++ +  + +   +++        + ++ge v +++H+ +l+a
  MMETSP1325-20131115|3149_1  23 RLLFVRHASSMKMR-QGAASRADAPhdwkfddqmrcLTDKGWEQCEAASEWFN--SLNVRAILSSPARRATDTAMGMQKQIETEGKQADVLSLRLV---ESAHPAGMSEVCEAAFETRGYGPLRSFHDTDEMKAAFSDYGEVVCGGMLAqlqgpglsEASDGECVALFGHAVFLNA 192
                 689******99332.222222332223333334566*****************..**************************999888888888888...45555567777776666666644333333333333333333333332222333577777777888888888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.33s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 1238.97
//
Query:       MMETSP1325-20131115|3150_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 606.43
//
Query:       MMETSP1325-20131115|3151_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.4   2.8      0.015   15.3   1.9    1.1  1  PF12022.3 Domain of unknown function (DUF3510)
      0.069   13.2   4.0      0.085   12.9   2.8    1.2  1  PF08278.6 DNA primase DnaG DnaB-binding
      0.098   12.2   1.2       0.12   11.9   0.8    1.1  1  PF13028.1 Protein of unknown function (DUF3889)
       0.12   11.9   0.5       0.23   11.0   0.0    1.7  2  PF06955.7 Xyloglucan endo-transglycosylase (XET) C-terminus
       0.12   11.2   2.6       0.14   11.0   1.8    1.0  1  PF08440.5 Potyviridae polyprotein
       0.21   11.4   7.7       0.26   11.2   5.4    1.1  1  PF11068.3 Protein of unknown function (DUF2869)
       0.24   10.5   3.5       0.24   10.5   2.4    1.0  1  PF07517.9 SecA DEAD-like domain


Domain annotation for each model (and alignments):
>> PF12022.3  Domain of unknown function (DUF3510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   1.9   7.7e-06     0.015      52     104 ..      14      66 ..       2      79 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 7.7e-06
   PF12022.3  52 keilskevkeeilqkvvskvterylekasevldsVkkteeslrrlkkkrkkes 104
                 k + +ke +e++++k +++v e+y+ ++++  ++ k   e+++++k+++k + 
  MMETSP1325-20131115|3151_1  14 KLTSDKEKLENYTKKALQNVQEKYMLAIKTRTEQLKEKDELIAQMKNTNKLKM 66 
                 44678999***************************************977554 PP

>> PF08278.6  DNA primase DnaG DnaB-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.8   4.4e-05     0.085      78     124 ..      16      67 ..       6      69 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.4e-05
   PF08278.6  78 k.deedieqefddalarLqeql...lerrieeLkaksrr.sgLtdeEkqelr 124
                 + d+e++e++ ++al+++qe++   ++ r e+Lk+k+   +++++  k +++
  MMETSP1325-20131115|3151_1  16 TsDKEKLENYTKKALQNVQEKYmlaIKTRTEQLKEKDELiAQMKNTNKLKMQ 67 
                 3399*****************9999************988888888877766 PP

>> PF13028.1  Protein of unknown function (DUF3889)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.8     6e-05      0.12      13      73 ..      12      72 ..       7      79 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6e-05
   PF13028.1 13 ekalaqaepayakWgrlAveevkekYpgakvvdylyvGrkkkedeqteekFkltlkekgke 73
                 ++l+ ++++ +++ + A ++v+ekY  a  + ++   +k +   q +++ kl+++++ +e
  MMETSP1325-20131115|3151_1 12 ISKLTSDKEKLENYTKKALQNVQEKYMLAIKTRTEQLKEKDELIAQMKNTNKLKMQQDRRE 72
                5667788899****************99987777777777777777888888888887765 PP

>> PF06955.7  Xyloglucan endo-transglycosylase (XET) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00012      0.23      11      32 ..      17      38 ..       9      39 .. 0.82
   2 ?   -1.6   0.1       1.1   2.1e+03      18      24 ..      60      66 ..      46      74 .. 0.55

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00012
                SGGGS--HHHHHHHHHHHHHTE CS
   PF06955.7 11 qeeasLdatqrrrmrwvqkkym 32
                +++ +L++  ++++++vq+kym
  MMETSP1325-20131115|3151_1 17 SDKEKLENYTKKALQNVQEKYM 38
                444469**************** PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.1
                HHHHHHH CS
   PF06955.7 18 atqrrrm 24
                +t++ +m
  MMETSP1325-20131115|3151_1 60 NTNKLKM 66
                3333333 PP

>> PF08440.5  Potyviridae polyprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.8   7.2e-05      0.14     163     221 ..      11      69 ..       3      76 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 7.2e-05
   PF08440.5 163 iidelleeekqkkehfksvtssstssssfsllsiantirsryakdhteeNievLqaaka 221
                 +i++l +++++ +++ k++ ++++++++  + + +++++ ++      +N ++L+++++
  MMETSP1325-20131115|3151_1  11 HISKLTSDKEKLENYTKKALQNVQEKYMLAIKTRTEQLKEKDELIAQMKNTNKLKMQQD 69 
                 8999****************************************999*******99875 PP

>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   5.4   0.00013      0.26      29     100 ..       5      75 ..       2      80 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00013
   PF11068.3  29 leqleqelqqLefqkkkalkeikkqsaqqieeiqqqvekekakreeq...kkqllqqleqvqeLelgsevkqgev 100
                 l++ e  +++L  +k k+++  k    ++++++q+++   ++ r eq   k++l  q+++ ++L++++  ++g++
  MMETSP1325-20131115|3151_1   5 LKEREGHISKLTSDKEKLENYTK----KALQNVQEKYMLAIKTRTEQlkeKDELIAQMKNTNKLKMQQDRREGQL 75 
                 56667788899999999998877....45566666655554444444222788999**********999888875 PP

>> PF07517.9  SecA DEAD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.4   0.00012      0.24      12      88 ..       4      80 ..       1      82 [] 0.89

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00012
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07517.9 12 elkklqkiveeineleeelkklsdeeLrekteelkerlkegesldellpeafavvreaakrtlgmrhydvQllgglv 88
                +lk+ +  +++ ++ +e+l+++++++L++ +e+    +k+++++ +   e +a ++++ k ++++  ++ Ql++  v
  MMETSP1325-20131115|3151_1  4 DLKEREGHISKLTSDKEKLENYTKKALQNVQEKYMLAIKTRTEQLKEKDELIAQMKNTNKLKMQQDRREGQLMSSAV 80
                677778889999999*****************999999887777778999***********************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2378  (0.173932); expected 273.4 (0.02)
Passed bias filter:                     1122  (0.0820655); expected 273.4 (0.02)
Passed Vit filter:                       101  (0.00738736); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.44u 0.47s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 401.02
//
Query:       MMETSP1325-20131115|3152_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 618.26
//
Query:       MMETSP1325-20131115|3153_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-08   31.7   0.0    3.5e-05   23.2   0.0    2.0  2  PF13414.1  TPR repeat
    0.00012   21.4   0.0      0.012   15.2   0.0    2.2  2  PF13181.1  Tetratricopeptide repeat
     0.0007   19.9   0.0        1.2    9.8   0.0    2.1  2  PF13428.1  Tetratricopeptide repeat
    0.00087   19.7   0.0     0.0011   19.4   0.0    1.1  1  PF13432.1  Tetratricopeptide repeat
     0.0013   18.4   0.0       0.65    9.9   0.0    2.2  2  PF07719.12 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   14.1   0.0      0.013   14.1   0.0    1.0  1  PF12569.3  NMDA receptor-regulated protein 1
       0.11   12.6   0.0        5.2    7.4   0.0    2.2  2  PF13431.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.8e-08   3.5e-05      18      69 .]      17      67 ..      10      67 .. 0.94
   2 !   12.1   0.0     5e-05     0.099       8      49 ..      41      82 ..      38      87 .. 0.85

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 1.8e-08
   PF13414.1 18 dydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                d+d+A+  y++A + dp +a+++ +++ + + +g d + A e +e+A +l+P
  MMETSP1325-20131115|3153_1 17 DLDGALSSYDEASQADPGSADVHIRRSGVMIDKG-DLDGAGEQLELANKLSP 67
                899*******************************.689********999998 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 5e-05
   PF13414.1  8 elGnalfkegdydeAieayekAleldpnnaelyynlAlaylk 49
                ++  + + +gd+d+A e++e A +l+pn+ +++  +++ +  
  MMETSP1325-20131115|3153_1 41 RRSGVMIDKGDLDGAGEQLELANKLSPNDVDVLMHRSQYHVL 82
                56667889*************************999987765 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.019        36      16      32 ..      17      33 ..      15      35 .. 0.88
   2 !   15.2   0.0   5.9e-06     0.012       2      33 ..      37      68 ..      36      70 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.019
                -HHHHHHHHH---HHHH CS
   PF13181.1 16 dydkAkeylekalelkp 32
                d d A++++ +a + +p
  MMETSP1325-20131115|3153_1 17 DLDGALSSYDEASQADP 33
                6799********99998 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 5.9e-06
                --TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelkpr 33
                 ++++++ ++ ++Gd d A e le a++l+p+
  MMETSP1325-20131115|3153_1 37 DVHIRRSGVMIDKGDLDGAGEQLELANKLSPN 68
                67899999***********************4 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0014       2.8      16      40 ..      17      41 ..      15      43 .. 0.92
   2 !    9.8   0.0   0.00061       1.2       8      41 ..      43      76 ..      40      79 .. 0.88

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0014
   PF13428.1 16 dpdeAiallrralalaPddaealll 40
                d+d+A+  +++a +++P++a+++++
  MMETSP1325-20131115|3153_1 17 DLDGALSSYDEASQADPGSADVHIR 41
                789******************9987 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00061
   PF13428.1  8 arallalGdpdeAiallrralalaPddaealllL 41
                  ++++ Gd+d+A ++l+ a +l+P+d ++l++ 
  MMETSP1325-20131115|3153_1 43 SGVMIDKGDLDGAGEQLELANKLSPNDVDVLMHR 76
                668999**********************999875 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   5.8e-07    0.0011      12      64 ..      17      69 ..      17      70 .. 0.96

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 5.8e-07
   PF13432.1 12 dydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPdd 64
                d+d Al  +++a  ++P+ a+++ ++  +  ++g+ld+A + l+ a +l+P+d
  MMETSP1325-20131115|3153_1 17 DLDGALSSYDEASQADPGSADVHIRRSGVMIDKGDLDGAGEQLELANKLSPND 69
                6899*********************************************9997 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0034       6.5      14      33 ..      15      34 ..       2      35 .. 0.79
   2 !    9.9   0.0   0.00033      0.65       1      34 []      36      69 ..      36      69 .. 0.94

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0034
                TT-HHHHHHHHHHHHHH-TT CS
  PF07719.12 14 lgdyeeAleafekAleldPn 33
                + d++ Al  +++A + dP+
  MMETSP1325-20131115|3153_1 15 SFDLDGALSSYDEASQADPG 34
                6699************9996 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00033
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  1 aealynlGlayyklgdyeeAleafekAleldPnn 34
                a+++ ++  + + +gd++ A e +e A +l Pn+
  MMETSP1325-20131115|3153_1 36 ADVHIRRSGVMIDKGDLDGAGEQLELANKLSPND 69
                6889999999**********************97 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   6.7e-06     0.013     210     262 ..      17      69 ..       3      85 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 6.7e-06
   PF12569.3 210 srekaleyidkaiehtptlvelymtkarilkhaGdlekAaelmeearklDlaD 262
                 + + al+  d+a + +p + ++++ ++ ++ ++Gdl++A e +e a kl  +D
  MMETSP1325-20131115|3153_1  17 DLDGALSSYDEASQADPGSADVHIRRSGVMIDKGDLDGAGEQLELANKLSPND 69 
                 56799*****************************************9997666 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0026       5.2       2      32 ..      25      55 ..      24      58 .. 0.91
   2 ?    3.4   0.0      0.05        98       5      17 ..      62      74 ..      59      85 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0026
   PF13431.1  2 yekaleldPnnadaynnLAelllnnGdleeA 32
                y +a + dP +ad++ ++  +  ++Gdl+ A
  MMETSP1325-20131115|3153_1 25 YDEASQADPGSADVHIRRSGVMIDKGDLDGA 55
                889999************9999999999977 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.05
   PF13431.1  5 aleldPnnadayn 17
                a +l+Pn++d++ 
  MMETSP1325-20131115|3153_1 62 ANKLSPNDVDVLM 74
                55899*****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|3155_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-33  114.1   0.0    6.5e-33  113.8   0.0    1.1  1  PF00069.20 Protein kinase domain
    1.1e-29  103.2   0.0    2.2e-29  102.2   0.0    1.4  1  PF07714.12 Protein tyrosine kinase
     0.0049   16.5   0.0     0.0071   15.9   0.0    1.2  1  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.056   12.3   0.0       0.14   11.0   0.0    1.6  2  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
       0.12   11.6   0.0       0.22   10.7   0.0    1.4  1  PF01163.17 RIO1 family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.8   0.0   2.4e-36   6.5e-33       3     153 ..      86     247 ..      84     252 .] 0.92

  Alignments for each domain:
  == domain 1    score: 113.8 bits;  conditional E-value: 2.4e-36
                 EEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEE.................STEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS CS
  PF00069.20   3 lleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfee.................kdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksse 153
                 l  k+G+GsfG+V++++ ++++  vAvK    +e   + ++  ++El++lk+++H+n+v+++++                      ++ +++e++++g l+d+l+  g++ ++++ k+a+ i++gle+lH+ giiHrD+KpeN+Ll+++ + ki+D+Gl+ + e+s e
  MMETSP1325-20131115|3155_1  86 LSTKVGEGSFGVVWEGTFRSQN--VAVKFQTLSEDLAEISQ-LRSELSLLKHMRHSNLVEFIGASLGkfpslktdegvrahnhdGPTVAIIMELCREGCLSDALQ--GNIPQRTLVKVARDIASGLEHLHHFGIIHRDVKPENVLLTEEWRGKICDYGLCVH-EESPE 247
                 5689*****************9..****9999999988865.477******************99889*************99888999****************..*****************************************************86.55544 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.2   0.0   7.9e-33   2.2e-29       2     153 ..      85     243 ..      84     250 .. 0.91

  Alignments for each domain:
  == domain 1    score: 102.2 bits;  conditional E-value: 7.9e-33
                 EEEEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBE......SSSS.............EEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEES CS
  PF07714.12   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvct......keep.............llivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardi 153
                  l+ k+GeG+fG V+egt +      +++VavK  + s++  e +++ +e++++k+++h+n+v+++g+ +      k  +             + i++e++++G+L++ L+ +    +  ++l+k+a +ia+G+e+L++  ++Hrd+   NvLl+ee   ki+D+GL+ + 
  MMETSP1325-20131115|3155_1  85 VLSTKVGEGSFGVVWEGTFR------SQNVAVKFQTLSEDLAEISQLRSELSLLKHMRHSNLVEFIGASLgkfpslK--TdegvrahnhdgptVAIIMELCREGCLSDALQGN----IPQRTLVKVARDIASGLEHLHHFGIIHRDVKPENVLLTEEWRGKICDYGLCVHE 243
                 67899***************......899******999999***************************996555542..045677788889999*****************99....99************************************************9765 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.6e-06    0.0071      94     186 ..     140     231 ..     120     241 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.6e-06
                 HHHHHHHHHHHHHHS--TTSHGGHCTBCTHHHHHHHHHHHHHHHHHCTHH...HHHHHHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEETTTTE CS
  PF01636.18  94 llealaellaalhqadpaadpladflapyltllrllesataalvaselle...lleeleervlaalaallpgaeppvllHgDlhpgNllvdpddgr 186
                 l+e +++ l+++ ++ +++ +++ + ++ +t+++ +++ ++ +  s+ l+    +  l + v++++a+ l    + +++H+D +p N+l++ +++r
  MMETSP1325-20131115|3155_1 140 LVEFIGASLGKFPSL-KTDEGVRAHNHDGPTVAI-IMELCREGCLSDALQgniPQRTLVK-VARDIASGLEHLHHFGIIHRDVKPENVLLT-EEWR 231
                 677777777777777.555555555544444444.4444443333333333333333333.88888888888889****************.6665 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.62   1.7e+03      97     133 ..     117     150 ..     109     156 .. 0.61
   2 ?   11.0   0.0   5.2e-05      0.14     117     172 ..     188     244 ..     177     250 .. 0.68

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.62
   PF06293.9  97 eklegaqdLaeilakwae...laeelkralleavGrliak 133
                 e      dLaei +   e   l++ ++ +l+e +G+   k
  MMETSP1325-20131115|3155_1 117 E------DLAEISQLRSElslLKHMRHSNLVEFIGASLGK 150
                 3......444444433334446677777777777776665 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 5.2e-05
   PF06293.9 117 eelkrall....eavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarrrl 172
                 +++ +++l    +++++  + +h  g+ H+d  + n+ll ee    +  + D   +++++
  MMETSP1325-20131115|3155_1 188 GNIPQRTLvkvaRDIASGLEHLHHFGIIHRDVKPENVLLTEEW---RGKICDYGLCVHEE 244
                 445555550000555555678******************9997...66666766666655 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   8.1e-05      0.22      82     162 ..     171     251 ..     164     252 .] 0.82

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 8.1e-05
                 EEEEE----TTCEGGCTTTS-..-HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESS.SEEE---TTEEETTSTTHHHH CS
  PF01163.17  82 vlvmefigedgvaapklkdvel.eeaeelyeeileemrklykeaglvHaDLSeyNvlvded.kvviIDvsQaveldhpnalef 162
                 +++me++  +g     l+ +   + + +++++i + ++ l  + g++H D+   Nvl++e+ +  i D +  v+ + p+ lef
  MMETSP1325-20131115|3155_1 171 AIIMELCR-EGCLSDALQGNIPqRTLVKVARDIASGLEHLH-HFGIIHRDVKPENVLLTEEwRGKICDYGLCVHEESPERLEF 251
                 68888888.77777777654434778888888888666665.9******************************9999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|3157_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 277.47
//
Query:       MMETSP1325-20131115|3156_1  [L=332]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-33  111.6  11.6      7e-16   57.5   0.3    3.1  3  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.3   5.2e-20     7e-16       5      90 ..      32     114 ..      30     120 .. 0.91
   2 !   39.3   0.1   2.5e-14   3.5e-10       8      85 ..     133     208 ..     127     216 .. 0.83
   3 !   20.9   1.0   1.4e-08   0.00019       4      90 ..     231     315 ..     228     321 .. 0.87

  Alignments for each domain:
  == domain 1    score: 57.5 bits;  conditional E-value: 5.2e-20
                 HHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   5 vlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkk 90 
                 ++k +laG++++ +++ +++P+dvvKtr+q       + ++g+++ +k+++ eeG+ +l  Gl+p+ ++++++  +kf+  e++k 
  MMETSP1325-20131115|3156_1  32 FIKGALAGGLCCGVTHGAVCPVDVVKTRIQ---LDPVKYNSGMIGGFKTVIAEEGVGALATGLGPTAVGYFIQGWFKFGGVEFFKI 114
                 67889*************************...55566669*****************************************9996 PP

  == domain 2    score: 39.3 bits;  conditional E-value: 2.5e-14
                 HHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---.GGGG---HHHHHHHHHHHHHHHHHH CS
  PF00153.22   8 sllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGi.rglyrGllpnllrvvpaaaikfvty 85 
                 +l ++a+A +ia+++ +Pl+ v++rl ++ + ++    ++ +a   ++ke+Gi  g+y+G++p l+++vp++++kfv+ 
  MMETSP1325-20131115|3156_1 133 YLGSAAAAETIADIFLCPLEAVRIRLVSEPTFGG---GSLPGAAAALVKENGIiGGFYSGFIPMLFKQVPYTMAKFVIQ 208
                 677899*********************4444444...455566677******879*********************975 PP

  == domain 3    score: 20.9 bits;  conditional E-value: 1.4e-08
                 HHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGG.G---HHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   4 svlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirgl.yrGllpnllrvvpaaaikfvtyetlkk 90 
                 +++  l +G+iAg+ aa++ +P d++  ++    + ++    g+++ l++i  e G+  l   Gl+++++ +   +a +f++++++  
  MMETSP1325-20131115|3156_1 231 TMAVALSSGVIAGVGAAIISHPADTLLSKVN---KAGAGGSGGMISRLSNIASEIGFVNLcTVGLGARCVMIGTLTAGQFAIFDSVMG 315
                 6777899*******************99999...56666779**************9666267*********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.37s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 1501.11
//
Query:       MMETSP1325-20131115|3160_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-07   29.6   0.0    8.5e-07   28.8   0.0    1.4  1  PF03109.11 ABC1 family
    2.7e-05   23.4   0.0    3.6e-05   23.0   0.0    1.1  1  PF01163.17 RIO1 family
    3.6e-05   23.5   1.4      0.024   14.2   0.0    2.9  3  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF03109.11  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   1.9e-10   8.5e-07      73     119 .]       5      51 ..       1      51 [. 0.93

  Alignments for each domain:
  == domain 1    score: 28.8 bits;  conditional E-value: 1.9e-10
  PF03109.11  73 rldleelvdelskelaeeldfkrEAknaekfrenfaklkevkvPkvy 119
                 ++d+e+l+ +l+  l+eeld++rEA+n+++f++n+a ++ v+vP+v+
  MMETSP1325-20131115|3160_1   5 QVDWEALLSTLAGALWEELDLRREARNQQRFATNMAPVNGVHVPTVI 51 
                 57899999************************************995 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   7.9e-09   3.6e-05      65     176 ..      39     152 ..      20     159 .. 0.76

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 7.9e-09
                 CHH.----S--EEEEETTEEEEE----TTCEGGCTTTS-.-HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESS....SEEE---TTEEETTSTTHHHHHHHHHHHHHHHHHC CS
  PF01163.17  65 lee.agvrvPkpialkrnvlvmefigedgvaapklkdveleeaeelyeeileemrklykeaglvHaDLSeyNvlvded....kvviIDvsQaveldhpnalefLerDveniikfFrr 176
                 +++  gv+vP++ia +r v+v e+i+  g+++ +l   +   ++++++ + ++  k + +    H D    N+l + +    ++ i+D + +ve+++ +a  +L+  ++   + F +
  MMETSP1325-20131115|3160_1  39 MAPvNGVHVPTVIASRRTVMVSEWID--GTPLNQLPSES-PILRSAVRRMRDAYTKSLYQDAFFHSDCHGGNLLSTPGdprgELCILDCGLMVEITDADADALLRLTLHLAQRDFAK 152
                 3331479*******************..*******9999.677777777776444444478899**********99652223789***************99998766666666655 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0004       1.8      32      92 ..      24      79 ..      14      88 .. 0.74
   2 !   14.2   0.0   5.2e-06     0.024     148     195 ..      78     127 ..      68     136 .. 0.79
   3 ?    0.2   0.1       0.1   4.7e+02      41     109 ..     139     168 ..     127     198 .. 0.53

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0004
                CHHHHHHHHHHHHHHHCCSSS.B--BEEE..E-CSSCSCEEEEEE---HHBCCT.CSHHHHHH CS
  PF01636.18 32 raaeelrrevallrlLakagi.pvPevlagdtdddvlgllfalleyvpgevler.klnarqlp 92
                ++++e+r++++++ + a  +  +vP v+a       +++ + + e+++g++l + +   + l+
  MMETSP1325-20131115|3160_1 24 DLRREARNQQRFATNMAPVNGvHVPTVIA-------SRRTVMVSEWIDGTPLNQlPSESPILR 79
                4667888888888888854445*******.......8888999********999644444444 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 5.2e-06
                 HHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEETTTTEE..EE---TT- CS
  PF01636.18 148 leervlaalaallpgaeppvllHgDlhpgNllvdpddgrv..gviDfeda 195
                 l+++v+++++a  ++  + ++ H D+h gNll +p+d+r   +++D++++
  MMETSP1325-20131115|3160_1  78 LRSAVRRMRDAYTKSLYQDAFFHSDCHGGNLLSTPGDPRGelCILDCGLM 127
                 4555666666666668899***************888888889***9875 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 0.1
                 HHHHHHHCCSSSB--BEEE..E-CSSCSCEEEEEE---HHBCCTCSHHHHHHHHHHHHHHHHHHHHHS- CS
  PF01636.18  41 vallrlLakagipvPevlagdtdddvlgllfalleyvpgevlerklnarqlpallealaellaalhqad 109
                 ++l  +La++++  ++v++   d   lg                                  + l ++d
  MMETSP1325-20131115|3160_1 139 LRLTLHLAQRDF--AKVVD---DLAALG----------------------------------FFLEELD 168
                 444555555555..24444...333333..................................3333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 1008.28
//
Query:       MMETSP1325-20131115|3162_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-77  259.7   0.0    3.1e-77  259.4   0.0    1.0  1  PF03949.10 Malic enzyme, NAD binding domain


Domain annotation for each model (and alignments):
>> PF03949.10  Malic enzyme, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.4   0.0   2.2e-81   3.1e-77      17     253 ..       2     246 ..       1     248 [. 0.96

  Alignments for each domain:
  == domain 1    score: 259.4 bits;  conditional E-value: 2.2e-81
                 HHHTS-GGG--EEEE-------HHHHHHHHHHHT..---HHHHHCTEEE----EEEBTTTSSHSTTCCCCCBCS-SS--S......-SHHHHHHHH..SEEEE-SS----S-HHHHHHHHHHSSS-EEEE--SSGGGSSS-HHHHHHCT--EEEEEB-.....EE....-EESSSB--GGGT----HHHHCCTTBSS--HHHHHHHHHHHHHT-SHHHHCTTBSS--GGGHHHHHHHHHHHHHHH CS
  PF03949.10  17 kitgkklseqkivvlGaGaAgigiaellvaalvke.GlseeearkkivlvDskGlltedredlneekkelakktnevkkk......ttleevvkkakpdvliGlsgvagvfteeivkemaesterPiifalsNPtpkaEitpeealeatagkvlvatGspfkpvel.ngrsdvpnQvNNvlvFPgiglGaldvrakkitdemllaaaealAelveeeeleegkilPklsdirevslkvaaaVaka 253
                 +itg++ls+q++++ GaG+Ag+giael+v+a++ e G+s+eear++i+l+Ds+Gl++e+r+dl+++k ++a+      ++       ++ e+++   p++liG+s+++g f+e ++++m + +e+P+i+alsNPt+kaE+t++ea+e+t+gk+++a+Gspf+pv+l +gr++vp+Q+NN++vFPgigl+al+++ak+++d+ ++ aa++lA+lv++++l++g ++P+l+dir vs+++aaaVa+a
  MMETSP1325-20131115|3162_1   2 RITGTPLSQQTFLFQGAGEAGVGIAELIVEAIKMEaGVSTEEARRQIWLMDSQGLVHEGRNDLAHHKLPFAHPIPPGMTSdskdgeSKILEALTVLSPHALIGVSAQGGCFSEAVLQKMGALHEQPVILALSNPTHKAECTAQEAYEHTDGKAIFASGSPFDPVTLpDGRRFVPGQGNNAYVFPGIGLAALASGAKHLKDSDMYVAATCLASLVDQDRLDQGCLYPPLEDIRAVSAQIAAAVAEA 246
                 799****************************98888**********************************99866654445566779************************************************************************************************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.45s 00:00:01.00 Elapsed: 00:00:00.55
# Mc/sec: 1363.74
//
Query:       MMETSP1325-20131115|3161_1  [L=423]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-06   25.2   6.7      3e-05   23.6   4.6    1.9  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   4.6   2.2e-09     3e-05       4      31 .]     370     396 ..     368     396 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 2.2e-09
                 SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   4 gWeersddddGrvYYyNheTgetqWekP 31 
                 +We ++d++ G +YYy ++Tge+q+e P
  MMETSP1325-20131115|3161_1 370 EWETHYDES-GTPYYYSTRTGESQYEAP 396
                 5**888778.****************88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1010  (0.0738736); expected 273.4 (0.02)
Passed bias filter:                      430  (0.0314511); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.48s 00:00:01.14 Elapsed: 00:00:00.54
# Mc/sec: 1877.15
//
Query:       MMETSP1325-20131115|3163_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   11.8   0.0      0.069   11.6   0.0    1.0  1  PF09334.6 tRNA synthetases class I (M)


Domain annotation for each model (and alignments):
>> PF09334.6  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     5e-06     0.069     362     391 .]       2      31 ..       1      31 [. 0.95

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5e-06
                 S-EEE-HHHHHHHHHHTTTTT---HHHHHH CS
   PF09334.6 362 kDsdfseeelvervnseLanklgNlvsRvl 391
                 +D+d+se+ + ++ n  Lan+lgNl  Rv+
  MMETSP1325-20131115|3163_1   2 QDGDYSETAMLATANGFLANALGNLQMRVM 31 
                 8**************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.44s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|3165_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|3164_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-19   67.3   8.0    1.1e-18   67.0   5.5    1.1  1  PF03073.10 TspO/MBR family
  ------ inclusion threshold ------
      0.091   12.3   0.0       0.12   11.9   0.0    1.1  1  PF04723.9  Glycine reductase complex selenoprotein A
       0.15   11.5   6.3        0.2   11.1   4.4    1.1  1  PF02417.10 Chromate transporter


Domain annotation for each model (and alignments):
>> PF03073.10  TspO/MBR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   5.5   2.5e-22   1.1e-18      27     147 ..      29     147 ..      18     148 .. 0.96

  Alignments for each domain:
  == domain 1    score: 67.0 bits;  conditional E-value: 2.5e-22
  PF03073.10  27 asLkkPswtPpnwvFgpvWtvLYilmgiaaylvwkkgkgkeeaklalalyalqlvlnllWsplfFglkslalalieillllllvlatilaflkvsrlaalllvPYllWvsfatyLnasiwr 147
                 ++L++PswtPp+ +F+++W ++ +l g+++++v+++  +++  + a+a+ +l+l +  +W+ +    k+l+++++++ l++++v+at++  +++s+la++ll+P ++W+++at+L+ +iwr
  MMETSP1325-20131115|3164_1  29 RRLRRPSWTPPGIAFPFIWGTITVLRGVSSAVVFSS--TQAFFTPAFAAMLLHLSIGDTWNTITNIEKRLGVSAVVAYLVAASVYATVYLYYSASSLAGYLLAPSAVWLTVATSLCTAIWR 147
                 68********************************87..799999****************************************************************************8 PP

>> PF04723.9  Glycine reductase complex selenoprotein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.7e-05      0.12      25      78 ..      52     110 ..      40     122 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.7e-05
   PF04723.9  25 clksidvevvfsstecfvctaagamdl.....enqkkvkeatekigaenlvvllgaaea 78 
                 +l+++++ vvfsst+ f   a  am l     ++ + + ++ +++g   +v  l aa  
  MMETSP1325-20131115|3164_1  52 VLRGVSSAVVFSSTQAFFTPAFAAMLLhlsigDTWNTITNIEKRLGVSAVVAYLVAASV 110
                 689999**************999998722222345789999999999999998888765 PP

>> PF02417.10  Chromate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   4.4   4.4e-05       0.2      75     157 ..      61     151 ..      40     158 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.4e-05
  PF02417.10  75 alvatlgiilPsfllilllalllkk...lkespsvqallagvkaavvglilaaaikllkk.....akksilslliallaflllllfklnpl 157
                  + +t ++++P+f+ +ll + + ++   + ++++   + a v+++v++ + a+++ +  +        ++ ++++++++ l+ + +++n  
  MMETSP1325-20131115|3164_1  61 VFSSTQAFFTPAFAAMLLHLSIGDTwntITNIEKRLGVSAVVAYLVAASVYATVYLYYSAsslagYLLAPSAVWLTVATSLCTAIWRINSP 151
                 3458889999999999886666555000555555555555555555555555555554446777777788889999998888888887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 899.86
//
Query:       MMETSP1325-20131115|3167_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      7e-09   34.7   0.0    7.2e-09   34.7   0.0    1.0  1  PF12781.2 ATP-binding dynein motor region D5


Domain annotation for each model (and alignments):
>> PF12781.2  ATP-binding dynein motor region D5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   5.3e-13   7.2e-09      78     130 ..       3      57 ..       1      58 [] 0.92

  Alignments for each domain:
  == domain 1    score: 34.7 bits;  conditional E-value: 5.3e-13
   PF12781.2  78 gdtvlienleesidpvldpllgrntikkgr..yikigdkeveynpkfrlilhtkl 130
                 g+ vl+en++e +d  l+p+l ++  k+g   +ik+gd++v y   fr+ + tkl
  MMETSP1325-20131115|3167_1   3 GKWVLMENVGEELDASLEPILLQQKFKQGSqyMIKLGDNNVPYSDSFRFFMTTKL 57 
                 7889************************954359*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.65
# Mc/sec: 213.83
//
Query:       MMETSP1325-20131115|3170_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.15   11.4   0.5       0.18   11.1   0.1    1.4  1  PF02192.11 PI3-kinase family, p85-binding domain
       0.16   11.3   3.8       0.22   10.9   2.6    1.1  1  PF02478.11 Pneumovirus phosphoprotein


Domain annotation for each model (and alignments):
>> PF02192.11  PI3-kinase family, p85-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   2.6e-05      0.18      33      58 ..      30      57 ..      19      61 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.6e-05
  PF02192.11 33 kdassYvFtcinqtaeee..eleDEtrr 58
                  ++ Y+F+++ ++a++e  e eDE r+
  MMETSP1325-20131115|3170_1 30 TTKKYYFFRGMKMFAVKEeiEIEDEGRQ 57
                56789**********9997788999876 PP

>> PF02478.11  Pneumovirus phosphoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.6   3.2e-05      0.22     143     167 ..       6      30 ..       3      33 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.2e-05
  PF02478.11 143 dnedndeeeSvltfeEkdtssssie 167
                 ++ed+de+e ++t+eEk t+   ++
  MMETSP1325-20131115|3170_1   6 EDEDEDEDEESYTYEEKTTTVRTVT 30 
                 48999**************988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       575  (0.0420568); expected 273.4 (0.02)
Passed bias filter:                      462  (0.0337917); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 283.21
//
Query:       MMETSP1325-20131115|3171_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 536.58
//
Query:       MMETSP1325-20131115|3172_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 755.77
//
Query:       MMETSP1325-20131115|3175_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.1   0.2      0.015   15.1   0.1    1.1  1  PF01543.12 Hepatitis C virus capsid protein


Domain annotation for each model (and alignments):
>> PF01543.12  Hepatitis C virus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   1.1e-06     0.015      32      86 ..      22      76 ..       4      90 .] 0.78

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.1e-06
  PF01543.12 32 gvyllprrGprlGvravrktsersqprgrrqpipkarrrearswlspGtlgpsta 86
                      rr pr+ vra+  t e   pr   +pi    +  a + +s  +   s+ 
  MMETSP1325-20131115|3175_1 22 ASSCTSRRSPRMLVRAMLSTAEAPPPRPAPKPISSLATLSASTSISVAVASISMR 76
                555678**********************999999999988888888776655443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 406.93
//
Query:       MMETSP1325-20131115|3169_1  [L=335]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.33s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 1574.08
//
Query:       MMETSP1325-20131115|3176_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1155  (0.0844792); expected 273.4 (0.02)
Passed bias filter:                      631  (0.0461527); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.63
# Mc/sec: 646.64
//
Query:       MMETSP1325-20131115|3177_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0004   19.7   0.0    0.00054   19.3   0.0    1.2  1  PF00149.23 Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.9e-08   0.00054     170     201 .]      25      72 ..       3      72 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 3.9e-08
                 H..................SCCHHHHHHHHHHHHTTSSEEEE-SSSSE CS
  PF00149.23 170 i................gggelfgpdalekllekygvdlvlrGHeHvp 201
                                  g+++ fgpd+++++l ++++dl++r+He +p
  MMETSP1325-20131115|3177_1  25 LlwadpqmskgrapskrGVSCMFGPDVTANFLDDNDLDLLVRSHEVKP 72 
                 2444556777777888899*************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 883.36
//
Query:       MMETSP1325-20131115|3180_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   12.7   1.1      0.054   12.5   0.7    1.1  1  PF11288.3 Protein of unknown function (DUF3089)
       0.18   10.8   1.1       0.18   10.8   0.7    1.0  1  PF08302.6 Fungal tRNA ligase phosphodiesterase domain


Domain annotation for each model (and alignments):
>> PF11288.3  Protein of unknown function (DUF3089)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.7   7.9e-06     0.054      55      93 ..      16      54 ..      11      56 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.9e-06
   PF11288.3 55 qatlaafletdkeeaekalelaysDVkrAFaaylaeene 93
                q +++a   +++ + + a ++ ysD ++A++ yl+e ++
  MMETSP1325-20131115|3180_1 16 QKAVRARQISERSDVQIAHNMQYSDFNAAWDRYLEEYDK 54
                3344444445566699999****************9875 PP

>> PF08302.6  Fungal tRNA ligase phosphodiesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.7   2.6e-05      0.18      97     144 ..       9      54 ..       1      57 [] 0.83

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.6e-05
   PF08302.6  97 pekarlykelknsrrvqpefHVTLiHraskkkkpqkdiWekylklyke 144
                  ++++  ++++  r++ +   V ++H+++ ++ +    W++yl++y++
  MMETSP1325-20131115|3180_1   9 KQEEKRQQKAVRARQISERSDVQIAHNMQYSDFN--AAWDRYLEEYDK 54 
                 345667789999999*****************88..9*********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1041  (0.076141); expected 273.4 (0.02)
Passed bias filter:                      726  (0.0531012); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 262.68
//
Query:       MMETSP1325-20131115|3179_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 906.45
//
Query:       MMETSP1325-20131115|3181_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|3174_1  [L=621]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-27   95.2   0.0    6.2e-22   78.0   0.0    2.2  2  PF01135.14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
    0.00094   18.6   0.0     0.0043   16.5   0.0    1.9  2  PF13847.1  Methyltransferase domain
     0.0023   17.5   4.8     0.0042   16.7   0.5    2.2  2  PF02185.11 Hr1 repeat
  ------ inclusion threshold ------
      0.071   12.6   0.0       0.14   11.7   0.0    1.5  1  PF13679.1  Methyltransferase domain
       0.11   11.7   0.0       0.17   11.0   0.0    1.2  1  PF08123.8  Histone methylation protein DOT1
       0.11   13.0   0.0        1.6    9.2   0.0    2.3  2  PF12847.2  Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF01135.14  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   0.0   2.7e-25   6.2e-22       2     124 ..       9     130 ..       8     170 .. 0.94
   2 !   15.0   0.0   5.3e-06     0.012     142     207 ..     392     457 ..     383     460 .. 0.86

  Alignments for each domain:
  == domain 1    score: 78.0 bits;  conditional E-value: 2.7e-25
                 HHHHHHHHHHH--.---HHHHHHHHHS-GGGGS-GGGGGGTTSSS-EE-----EE--HHHHHHHHHHTT--TT-EEEEE------HHHHHHTTSSEEE...EE-SB---HHHHHHHHHHTT-- CS
  PF01135.14   2 kkealieelkkkgviksdkvaealeevdReefvpesfkekaYedaplsigynatiSaphmvalalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle 124
                 ++++++++l++ gvi++ +va+a++ +dR+ fvp+ +k  aY d+pl+   n+  Saph+ ++a++ l+l++g++ L++GsG+Gy + + a l g+++    ie  ++++++a++ +  l+++
  MMETSP1325-20131115|3174_1   9 TNDEMVDQLQAFGVITQSRVADAFRVIDRKYFVPDRLKGDAYSDQPLK-HGNVHLSAPHIYGTAMDALDLQDGQSFLNIGSGTGYISSIAAYLTGPTAINHNIELHEDVCAHAHKSIADLKAH 130
                 5789*******************************************6.56899********************************************999**************99988776 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 5.3e-06
                 -BSEEEESSB.-SS--HHHHHTB-----EEEEE-.--SEEEEEEEE--.--EEEEEEEEE---B--- CS
  PF01135.14 142 PYdaihvgaa.apeiPealidQLkeGGrlvvPvgeeeeQvlklvdkkadgkvvikkleevrfvpltd 207
                  Yd+i++gaa +p++ + + + L+ GG lv P+g +e  ++ +v+ +    +v++ l+ vrf pl  
  MMETSP1325-20131115|3174_1 392 RYDRIYIGAAcPPDMRDFMCELLAVGGVLVGPLG-DELLKIRRVSDHPSTGLVVTCLAGVRFAPLIR 457
                 5******986267888999999************.888888888888889999***********976 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.9e-06    0.0043       2      52 ..      78     128 ..      77     155 .. 0.88
   2 ?   -0.9   0.0      0.44     1e+03      52      83 ..     371     402 ..     365     431 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.9e-06
   PF13847.1   2 ksgikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklg 52 
                 ++g+++l +G+GtGy++ ++a + gp a  + i+  e+ +++A +  ++l+
  MMETSP1325-20131115|3174_1  78 QDGQSFLNIGSGTGYISSIAAYLTGPTAINHNIELHEDVCAHAHKSIADLK 128
                 68899***************************************9877776 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.44
   PF13847.1  52 gfenveFiqgdieeleklle..esfDlvisnevl 83 
                     +e+++g+i++++k  e   ++D +   +++
  MMETSP1325-20131115|3174_1 371 AMAHIEICHGSIFNVDK--EdcMRYDRIYIGAAC 402
                 5567999*******985..334678877665444 PP

>> PF02185.11  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.058   1.3e+02       6      26 ..     132     152 ..     127     160 .. 0.78
   2 !   16.7   0.5   1.8e-06    0.0042       4      57 ..     543     592 ..     540     604 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.058
                 XXXXXXXXXXXXXXXXXXXXX CS
  PF02185.11   6 LrkklekElkireGaenmlra 26 
                 +rk+le+E+   + a+   + 
  MMETSP1325-20131115|3174_1 132 IRKQLEREREAANEAQQSAQT 152
                 899999999988888877665 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 1.8e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF02185.11   4 ekLrkklekElkireGaenmlraletdkksvlqeaesklreseqkielLkeqLe 57 
                 +kLr++l+ E + r+ ae+m+r  e + +  + eae ++   ++    L++qL+
  MMETSP1325-20131115|3174_1 543 DKLRRRLDAEVAARQEAESMVR--EAK-RA-RREAERERDIYKTLARRLHMQLQ 592
                 79********************..555.55.79999999999999999999987 PP

>> PF13679.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     6e-05      0.14      22      96 ..      76     148 ..      56     184 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 6e-05
   PF13679.1  22 keegsltvvDvGaGkgYLafvlasylkekeyklkv.vgidvkeelvekaeelaeklgkkfnkslsfaegtiaeatp 96 
                 + ++ ++ +++G+G gY ++++a++   +  ++++ +  dv++++ +++ +l+++l +   k+l+++ ++ +ea++
  MMETSP1325-20131115|3174_1  76 DLQDGQSFLNIGSGTGYISSIAAYLTGPTAINHNIeLHEDVCAHAHKSIADLKAHLIR---KQLEREREAANEAQQ 148
                 5566778899************993333445554423345666666666665555553...333333333333322 PP

>> PF08123.8  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   7.7e-05      0.17      33      92 ..      70     130 ..      62     137 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 7.7e-05
                 HHHHHTT-----EEEEE------HHHHHHHH--.--EEE--B--HHHHHHHHHHHHHHHHH CS
   PF08123.8  33 evldkvnlkkedvFvDLGSGvGnvvlqaalevg.cklsvGvEimdnaselaekqkeelkkr 92 
                 + +d ++l++ + F+ +GSG G +   aa  +g ++    +E+ ++ ++ a+k    lk++
  MMETSP1325-20131115|3174_1  70 TAMDALDLQDGQSFLNIGSGTGYISSIAAYLTGpTAINHNIELHEDVCAHAHKSIADLKAH 130
                 568999******************9998866552778899*****9999999887777665 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00071       1.6       2      51 ..      80     128 ..      79     174 .. 0.71
   2 ?    1.0   0.0      0.24   5.5e+02      51      84 ..     372     406 ..     335     423 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00071
   PF12847.2   2 gkrilDlGcGtGsls.lelarlrpgakvvgvDpseeslelarenaksldle 51 
                 g + l +G+GtG++s +++    p a  + ++++e+ ++ a + +  +dl 
  MMETSP1325-20131115|3174_1  80 GQSFLNIGSGTGYISsIAAYLTGPTAINHNIELHEDVCAHAHKSI--ADLK 128
                 67889*******987455556789999**************9888..2222 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.24
   PF12847.2  51 eeriellqgda.keelsllerfDavllkgltldal 84 
                   +ie+ +g + ++++++  r+D + ++  +  ++
  MMETSP1325-20131115|3174_1 372 MAHIEICHGSIfNVDKEDCMRYDRIYIGAACPPDM 406
                 46899999***8888888888****9977333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       710  (0.051931); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.08u 0.42s 00:00:01.50 Elapsed: 00:00:00.66
# Mc/sec: 2254.75
//
Query:       MMETSP1325-20131115|3182_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|3183_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.66    9.7   5.4       0.12   12.0   0.3    2.1  2  PF05926.6 Phage head completion protein (GPL)
        3.1    8.2   7.2         72    3.8   0.1    2.8  2  PF07813.7 LTXXQ motif family protein


Domain annotation for each model (and alignments):
>> PF05926.6  Phage head completion protein (GPL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   1.8e-05      0.12      50     121 ..      33      98 ..      28     117 .. 0.76
   2 ?   -1.0   0.3      0.19   1.3e+03      17      39 ..     149     171 ..     141     178 .. 0.51

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.8e-05
   PF05926.6  50 kaeqqaagvasladvpaeklngesvlvarYkrAVyarakAdLleryrsvdatekgekkaeeleetaddllrd 121
                 + e ++ g a +a+ pae+++   +l+   ++A+  ra+A L+++++++++ e     + el+  ++d +++
  MMETSP1325-20131115|3183_1  33 EMESRKGGRADVASTPAERIKRGRALL---QSAIDERARALLVPQFAAFSRDEI---DSAELARYRADARKE 98 
                 5677889999**********9766666...79****************999877...333444444444444 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.19
   PF05926.6  17 rkemrldgtvtaerlkeallaAi 39 
                 ++++r ++ +t  +l+ +++aA 
  MMETSP1325-20131115|3183_1 149 EAALRKEAXLTVRQLRITAAAAA 171
                 44555555444444443333333 PP

>> PF07813.7  LTXXQ motif family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.011        72      43      74 ..      32      66 ..      20      71 .. 0.69
   2 ?    3.7   3.3     0.011        76      51      91 ..     115     155 ..      59     164 .. 0.72

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.011
   PF07813.7 43 emramrk...anfdetaperlaameamlearleav 74
                + ++ rk   a+++ t++er+ + +a l+  + ++
  MMETSP1325-20131115|3183_1 32 SEMESRKggrADVASTPAERIKRGRALLQSAIDER 66
                2333444566699*********9999888776655 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.011
   PF07813.7  51 nfdetaperlaameamlearleavkkrakalkqfyavLtpE 91 
                 ++     e+ a++   ++ r+eavk r+ka  ++ a+L  E
  MMETSP1325-20131115|3183_1 115 SLLGMVTEADAHVTSLSQLRDEAVKTRDKAAGKLEAALRKE 155
                 3333334555677889999**************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.59
# Mc/sec: 735.15
//
Query:       MMETSP1325-20131115|3190_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 357.10
//
Query:       MMETSP1325-20131115|3191_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 458.43
//
Query:       MMETSP1325-20131115|3193_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-25   89.8   0.0    1.5e-25   89.3   0.0    1.2  1  PF12766.2  Pyridoxamine 5'-phosphate oxidase
    2.3e-08   33.8   0.0    4.8e-08   32.7   0.0    1.5  1  PF01243.15 Pyridoxamine 5'-phosphate oxidase


Domain annotation for each model (and alignments):
>> PF12766.2  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.3   0.0   2.1e-29   1.5e-25       3      99 ..      29     122 ..      27     123 .. 0.94

  Alignments for each domain:
  == domain 1    score: 89.3 bits;  conditional E-value: 2.1e-29
   PF12766.2   3 pwrsllesalkke.kkkkstsfqlaTvdeeegkPrvRtvvfRgfleekkeesdvltfttDvrseKvkqlessnsaveavfwfketreQfRikGkafvi 99 
                 pwr+ +e++++++ k +  + +q++Tvd  +g P++RtvvfRgf +     +d ++++tD+rs+K+++++ +++a+e+v+wf++++eQ+Ri G++ +i
  MMETSP1325-20131115|3193_1  29 PWRERIEESISRSrKVRGGNFVQISTVD-GDGLPHCRTVVFRGFETLG--GRDSMKMITDARSSKCSEIR-ASPACEMVWWFSKSSEQYRIAGELELI 122
                 9***********999999**********.6999***********9976..7888****************.79*********************9887 PP

>> PF01243.15  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0     7e-12   4.8e-08      12      88 ..      41     125 ..      30     126 .. 0.84

  Alignments for each domain:
  == domain 1    score: 32.7 bits;  conditional E-value: 7e-12
                 T......TEEEEEEE----.EEEEEEECEEETTC....TEEEEEEETTSHHHHHHHH--EEEEEEEETTGGTEEEEEEEEEEEE-CH CS
  PF01243.15  12 s......kagtLATvdkdGrPsaspvllkygdgr....dgiyfatnkdsrkvrnleenpkvsllfvddeelgrqvrieGraeilsde 88 
                 s      +++ ++Tvd dG P++++v +  g+++    d + ++t+++s k  ++++ p + ++ +  + + +q+ri G+ e++ +e
  MMETSP1325-20131115|3193_1  41 SrkvrggNFVQISTVDGDGLPHCRTVVFR-GFETlggrDSMKMITDARSSKCSEIRASPACEMVWWFSK-SSEQYRIAGELELIGAE 125
                 466666699******************99.77777999*********************9998665555.9***********99766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 1148.25
//
Query:       MMETSP1325-20131115|3195_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 262.24
//
Query:       MMETSP1325-20131115|3196_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-06   26.2   1.7      0.024   14.4   0.1    2.4  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.1     2e-05      0.28      20      39 .]       4      23 ..       3      23 .. 0.88
   2 !   14.4   0.1   1.7e-06     0.024       6      38 ..      36      67 ..      31      68 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 2e-05
                ESSSTEEEEEETTSEEEEEE CS
  PF00400.27 20 spdgpllasgSrDgtirlWd 39
                +++  +l+sgS+ g+i++W+
  MMETSP1325-20131115|3196_1  4 HHSDDRLFSGSYEGSIYVWS 23
                566779*************7 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.7e-06
                EE.ESSSSSEEEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  6 tl.rgHtspVtcvafspdgpllasgSrDgtirlW 38
                ++ ++H+ +Vtc+  s    +l+++++Dg++  +
  MMETSP1325-20131115|3196_1 36 KFeTAHSLAVTCLVSSWA--HLITAGDDGKVVFY 67
                55589*************..**********9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 746.04
//
Query:       MMETSP1325-20131115|3198_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|3199_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 847.94
//
Query:       MMETSP1325-20131115|3201_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-21   74.1   0.6    1.2e-20   73.5   0.4    1.2  1  PF03092.11 BT1 family


Domain annotation for each model (and alignments):
>> PF03092.11  BT1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.5   0.4   8.5e-25   1.2e-20     271     423 ..       2     157 ..       1     165 [. 0.94

  Alignments for each domain:
  == domain 1    score: 73.5 bits;  conditional E-value: 8.5e-25
  PF03092.11 271 gvtlfnrllkklsyRlvfivttvlqvlaglfdlilvkrwnlklGisDhvyilgdsvvlevlymlkfmPlvvllsrLCPrGsEsvvfAllasianlgqivSsslGalLmeylgvtedq.....fsnlsllllveslaallplpLlflllpsariiddid 423
                 g++++++++   +  l+ i+ttvl++ +++++l l  +w   +G+++ ++  gd ++   ++++ fmP+ v+   + P G E++++Al+    n++  v+  lG lL   + +t+d+     + nl  l  ++s +++lp+ +++++++  ++  + +
  MMETSP1325-20131115|3201_1   2 GIWAYDKFFFSWKWPLLYIITTVLSAGFSFLQLCLCYGW--TFGLPNIIFATGDISLQSAVQYVTFMPMCVMFLAMIPGGAEGTLYALITTWQNVAAEVGYDLGTLLECPISITNDDlengkWGNLIELTWITSAIQVLPIFFVHVVYKGVKVLPNNQ 157
                 899************************************..5899************************************************************************999999999999******************99777765444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 968.13
//
Query:       MMETSP1325-20131115|3202_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1153  (0.0843329); expected 273.4 (0.02)
Passed bias filter:                      718  (0.0525161); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.42s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 867.05
//
Query:       MMETSP1325-20131115|3203_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       762  (0.0557343); expected 273.4 (0.02)
Passed bias filter:                      517  (0.0378145); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 728.49
//
Query:       MMETSP1325-20131115|3204_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        5.4    6.3   6.3        6.5    6.1   4.4    1.1  1  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   4.4   0.00047       6.5     119     133 ..      15      29 ..       5      39 .. 0.54

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00047
                 ---XXXXXXXXXXXX CS
  PF03066.10 119 ddeedeeeeddeedd 133
                 d+e dee++d++edd
  MMETSP1325-20131115|3204_1  15 DEEKDEEDKDEDEDD 29 
                 333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       608  (0.0444705); expected 273.4 (0.02)
Passed bias filter:                      500  (0.0365711); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|3186_1  [L=1517]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1517 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       816  (0.059684); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 2.04u 0.37s 00:00:02.41 Elapsed: 00:00:00.96
# Mc/sec: 3786.74
//
Query:       MMETSP1325-20131115|3208_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 293.89
//
Query:       MMETSP1325-20131115|3209_1  [L=318]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-08   33.8   1.3    1.5e-07   31.2   0.1    2.2  2  PF02148.14 Zn-finger in ubiquitin-hydrolases and other protein
  ------ inclusion threshold ------
       0.93    9.6   9.1       0.44   10.7   4.2    1.8  2  PF03234.9  Cdc37 N terminal kinase binding
        2.5    8.0  15.6       0.29   11.0   2.3    2.2  2  PF09403.5  Adhesion protein FadA
        4.2    7.9   8.4        5.5    7.5   1.0    2.6  2  PF13767.1  Domain of unknown function (DUF4168)
        5.3    6.9  11.4        6.2    6.7   6.5    2.0  2  PF14282.1  FlxA-like protein


Domain annotation for each model (and alignments):
>> PF02148.14  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.1   5.5e-11   1.5e-07      16      59 ..      19      68 ..      10      71 .. 0.88
   2 ?    0.9   0.1      0.16   4.4e+02      19      47 ..     110     159 ..     107     166 .. 0.75

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 5.5e-11
  PF02148.14 16 kCghvgCgrks......nghalkHyeetgHplavdlstlsvycyscddev 59
                +Cg+ +C  +        +h+l+Hye+++H +a++lst ++++y+ d + 
  MMETSP1325-20131115|3209_1 19 SCGRALCAASLgavvtlVEHSLSHYETSHHRWAIELSTRRIWDYAADGYA 68
                6999999976688888679**************************99876 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.16
  PF02148.14  19 hvgCgrksnghalkHyeetg.....................Hplavdlst 47 
                 +v Cg    gh l+++++ +                     H la +l++
  MMETSP1325-20131115|3209_1 110 SVECGGPGAGHLLHYANDARaqgddeymlgvklsglateyeHLLATQLEE 159
                 67899888899998888877888999777777777777777777777765 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.73     2e+03     145     166 ..     155     176 ..     133     187 .. 0.59
   2 ?   10.7   4.2   0.00016      0.44      48     139 ..     195     281 ..     184     305 .. 0.65

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.73
   PF03234.9 145 keekelekkleelekeekkkit 166
                 ++ +e+++++e+l ++e++k  
  MMETSP1325-20131115|3209_1 155 TQLEEQRHHYEQLLAREAAKSA 176
                 3444444444454444444433 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00016
   PF03234.9  48 ieelekelkinkkllervdkllselkeeeelssekvlkklneeadkedka...sveeeeeeqpkynemledLldqv.........kdevdekkaaklieelkkh 139
                 +++l ++ +++++l++++++  ++l++ +     kv+ +l e+++++++     +e+++ e+  ++e++ dL +q+         +++vd+             
  MMETSP1325-20131115|3209_1 195 RASLTLQEDEYRSLISELRNSEASLRTAK-----KVTASLLEAQHEKETKvrvLKENADAEKKACDELVRDLQQQIteltfylrtQKQVDQ------------S 281
                 56777777888888888887777777664.....45555555554444444558999*******************655555433333332............2 PP

>> PF09403.5  Adhesion protein FadA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.3   0.00011      0.29      28      98 ..     141     212 ..     121     221 .. 0.77
   2 ?    2.2   3.8     0.056   1.5e+02      55     123 ..     220     286 ..     211     289 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00011
   PF09403.5  28 elkaleaeYqdLv..kkeeaRfeeekeekeaaekevaklkelkaeleeklaklkeesktrfykdeykkLlkky 98 
                  l +l  eY++L+  + ee+R + e+  + + +++ a  +e  a+ +e+ a+++  +      dey+ L+++ 
  MMETSP1325-20131115|3209_1 141 KLSGLATEYEHLLatQLEEQRHHYEQLLA-REAAKSASVAEAIASASERAAVAEIRASLTLQEDEYRSLISEL 212
                 6789*******863244666666665555.55566788999****************************9976 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.056
   PF09403.5  55 eaaekevaklkelkaeleeklaklkeesktrfykdeykkLlkkyeeylkkleekieekeeviselekiq 123
                  +a+k  a l e + e e k+ +lke+++    k   ++L+++ ++ + +l   +  +++v    +k+q
  MMETSP1325-20131115|3209_1 220 RTAKKVTASLLEAQHEKETKVRVLKENADAE--KKACDELVRDLQQQITELTFYLRTQKQVDQSPQKVQ 286
                 5788889999999999999999999999876..889999999999999988888888888766666665 PP

>> PF13767.1  Domain of unknown function (DUF4168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.0     0.002       5.5      14      72 ..     155     216 ..     153     223 .. 0.83
   2 ?    4.1   0.1     0.024        67       5      30 ..     267     296 ..     264     305 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.002
   PF13767.1  14 laieplrqeayeeiqa..cedpasiqalqreaqkeavkaI.edngLtvseFneItqaaqsDp 72 
                  ++e++r+ + + + +  +++ + ++a++  ++  av++I  +  L+ +e+  +  ++++ +
  MMETSP1325-20131115|3209_1 155 TQLEEQRHHYEQLLAReaAKSASVAEAIASASERAAVAEIrASLTLQEDEYRSLISELRNSE 216
                 57899**99999987775666688899999999999****99999******99888887654 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.024
   PF13767.1   5 eitnyarAvlaieplrqeayeeiqa....c 30 
                 e+t y r+ +++ +  q+++ee++     +
  MMETSP1325-20131115|3209_1 267 ELTFYLRTQKQVDQSPQKVQEEMRGglvvT 296
                 8999******************99877652 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.5     0.028        76       4      59 ..     177     233 ..     173     236 .. 0.78
   2 ?    6.7   6.5    0.0023       6.2       7      81 ..     213     287 ..     207     314 .. 0.68

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.028
   PF14282.1   4 Sasstsssassgss.dsqiksLqkqiqsltkqlkelssdeeltaeekqkqqqliqqQ 59 
                 S +++  sas+    ++  +sL+ q +++ + ++el ++e++  + k+   +l+++Q
  MMETSP1325-20131115|3209_1 177 SVAEAIASASERAAvAEIRASLTLQEDEYRSLISELRNSEASLRTAKKVTASLLEAQ 233
                 555555555555553555589*****************9999999999999999998 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0023
   PF14282.1   7 stsssassgssdsqiksLqkqiqsltkqlkelssdeeltaeekqkqqqliqqQIqalqaQia.qlqsqqseeaqqs 81 
                   s+  s  + ++ ++sL + + + + ++  l++++++ ++   +    +qqQI++l   ++ q+q +qs ++ q+
  MMETSP1325-20131115|3209_1 213 RNSEA-SLRTAKKVTASLLEAQHEKETKVRVLKENADAEKKACDELVRDLQQQITELTFYLRtQKQVDQSPQKVQE 287
                 44444.3334477788888888888999******9998888889*************9888635555555554333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1480  (0.10825); expected 273.4 (0.02)
Passed bias filter:                      633  (0.046299); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.40s 00:00:01.19 Elapsed: 00:00:00.63
# Mc/sec: 1209.59
//
Query:       MMETSP1325-20131115|3207_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-11   42.6  10.3    6.3e-11   42.1   7.1    1.3  1  PF03318.8  Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
    0.00068   18.5   8.5      0.001   17.9   5.9    1.2  1  PF01117.15 Aerolysin toxin


Domain annotation for each model (and alignments):
>> PF03318.8  Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   7.1   9.3e-15   6.3e-11      46     202 ..     146     300 ..     105     317 .. 0.72

  Alignments for each domain:
  == domain 1    score: 42.1 bits;  conditional E-value: 9.3e-15
                 EE---EEEEEEEEEEEE-S..S-----S--EEEEE-S-.-------EEE..EES..SS--EEEEEEEEEEEE---EEEE-TTEEEEEEEEEEEEEEE-EEEEE-EEE--B--.-B--BTTB--B-....--B-SGGGT-TTTS.....-----BEE-----E CS
   PF03318.8  46 lqtqsFskkvtettSttvt..hGfkigakasgkvkipfvaeggvtlsvtgeYNf..ssttTettsttekltapSQkvtVPPhttvtvtlvlekteisvpveLyttlsGtefk.divslvsitrdeyvepasavltaswplldiifklinsdnsvnfkGsGyf 202
                 +qt++F++++t+t S++ t  +++ +g++     k+p +++ + + +    Y f  +s++Tet st+++ +   Q+vtVP+++tv+ t +++k+++++++    +l  +++   +    + +++e  +pa   l a++p+  ++++ + s+  + +kG G+f
  MMETSP1325-20131115|3207_1 146 AQTSKFTRTETKTDSASWTlsTTVDVGYEFDIEAKVPELFDETEKFT----YKFstTSSDTET-STSTQSWTAEQDVTVPAKSTVKLTWIITKETVTGDYSADINL--PNYAkIWCNDKTNDHYEWFIPADEFLPAAYPTACTDNSCKISGPFTGVKGVGSF 300
                 79******999999887551155558888888888888888888888....666114555554.4556678888************************99877766..555545666667777777777777777777777776666666666666666655 PP

>> PF01117.15  Aerolysin toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   5.9   1.5e-07     0.001      93     216 ..     123     246 ..      96     252 .. 0.73

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.5e-07
  PF01117.15  93 dptvsdrelvktisatarnesdtekqkvvtlkydestnwsktdtyklaekvgiknkfkvplvg......ktelsieleaeqswsdtnggsstksesaqaratvpaksklpirvellkskisypYkakldv 216
                 +++ ++ +     + + +n  d  ++     k++ ++  +ktd+ +   + +++  +++++++      +   +++++ + + sdt++ +st+s +a++  tvpaks  +++  ++k++++  Y a++++
  MMETSP1325-20131115|3207_1 123 NVETQTSDNDWVFTQWYDNGLDLAQTS----KFTRTE--TKTDSASWTLSTTVDVGYEFDIEAkvpelfDETEKFTYKFSTTSSDTETSTSTQSWTAEQDVTVPAKSTVKLTWIITKETVTGDYSADINL 246
                 444444444444444444444433332....233333..67777776666777777777766666888855668999999999*****************************************999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       638  (0.0466647); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.36s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 1455.56
//
Query:       MMETSP1325-20131115|3212_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 713.91
//
Query:       MMETSP1325-20131115|3213_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|3214_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|3215_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1155.89
//
Query:       MMETSP1325-20131115|3216_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.3    8.9   6.1        3.7    7.4   0.6    2.4  2  PF04241.10 Protein of unknown function (DUF423)


Domain annotation for each model (and alignments):
>> PF04241.10  Protein of unknown function (DUF423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.6   0.00027       3.7      59      80 ..      41      62 ..      22      67 .. 0.82
   2 ?    4.0   0.3    0.0031        42      17      71 ..      68     120 ..      62     128 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00027
  PF04241.10 59 laGillFsGslyalaltgdkll 80
                laG +lFs s+ +l+l+g+++l
  MMETSP1325-20131115|3216_1 41 LAGFVLFSISVAMLSLLGHTQL 62
                79***************99765 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0031
  PF04241.10  17 eqlelfetavqyqllHalallalallakrlasrllklagalflaGillFsGslya 71 
                 e ++ ++ a++ q l al++l++    + + s + + +  ++laG+ lF  s+ +
  MMETSP1325-20131115|3216_1  68 ELMDNMNCAAHWQTLLALIVLLIR--DADMFSTTQYEVVGCVLAGTNLFMLSMLL 120
                 566677788888888888888777..33348888888999999******888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.45s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 1391.73
//
Query:       MMETSP1325-20131115|3219_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00045   19.8   0.3     0.0011   18.6   0.2    1.6  1  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.2   7.8e-08    0.0011       2      47 ..      28      99 ..      27     100 .] 0.86

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 7.8e-08
                EEEEEEESS--S-STSS.SS-EEEEEEEECTTE.EE........................EEE--BSS-SSE CS
  PF00168.25  2 kvkvieAknLpnkdkng.tsdpyvkvslggaks.kk........................krTrvikntlnP 47
                +v++  +++L + dk++ +sdpy++  + g +  k                           T+ i +t+nP
  MMETSP1325-20131115|3219_1 28 SVTIQGGHDLAAVDKKHpSSDPYCTAFVPGCEIlKDakkasghkkkehndfgkeakdvhqWSTKSIAKTTNP 99
                69999*********9999************777622567899999999999999999999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|3217_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1447.80
//
Query:       MMETSP1325-20131115|3220_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-09   35.4   1.1    1.1e-06   28.1   0.1    2.3  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.1   8.2e-11   1.1e-06      12      39 .]      38      65 ..      28      65 .. 0.90
   2 !    6.3   0.1   0.00061       8.3      13      29 ..      81      97 ..      73      99 .. 0.89

  Alignments for each domain:
  == domain 1    score: 28.1 bits;  conditional E-value: 8.2e-11
                SSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27 12 spVtcvafspdgpllasgSrDgtirlWd 39
                ++V+++af+p    +a+g++Dg + +Wd
  MMETSP1325-20131115|3220_1 38 FAVNSIAFHPLHGTFATGGCDGFVNIWD 65
                68*************************9 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.00061
                SEEEEEEESSSTEEEEE CS
  PF00400.27 13 pVtcvafspdgpllasg 29
                ++ +++f++dg++la +
  MMETSP1325-20131115|3220_1 81 SIASLSFNHDGTMLAVA 97
                5779***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 564.14
//
Query:       MMETSP1325-20131115|3223_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|3225_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.067   12.8   0.0      0.076   12.6   0.0    1.0  1  PF06891.6 P2 phage tail completion protein R (GpR)


Domain annotation for each model (and alignments):
>> PF06891.6  P2 phage tail completion protein R (GpR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.6e-06     0.076      70     107 ..       7      44 ..       2      47 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.6e-06
   PF06891.6  70 mapvlaWLrenqpdlreekrlkdpefdvdindddsadl 107
                 m  +  WLr+++p +r ++r++ +e+  d   ++ a+l
  MMETSP1325-20131115|3225_1   7 MFRIELWLRTKDPTIRVQLRDSMIEVMTDGDQNKMAEL 44 
                 677889***********************999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|3224_1  [L=336]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.1e-107  357.8   1.6   2.6e-107  357.5   1.1    1.0  1  PF03643.10 Vacuolar protein sorting-associated protein 26
    0.00083   19.0   2.4       0.23   11.1   0.3    3.5  3  PF00339.24 Arrestin (or S-antigen), N-terminal domain
  ------ inclusion threshold ------
      0.031   14.2   0.0        0.3   11.1   0.0    2.5  1  PF02752.17 Arrestin (or S-antigen), C-terminal domain


Domain annotation for each model (and alignments):
>> PF03643.10  Vacuolar protein sorting-associated protein 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  357.5   1.1  5.8e-111  2.6e-107      28     275 .]      27     276 ..      11     276 .. 0.97

  Alignments for each domain:
  == domain 1    score: 357.5 bits;  conditional E-value: 5.8e-111
  PF03643.10  28 kkeklkvyedgeslsGvvtirlkdskkvehqGikveliGqiellydkgnsvdfislvkdlakpGelqesksfpfefkklekryesYkGknvklrYvlrvtvvRklkditkekdlivhefttaPevnksvklevGiedclhiefeyskskyhLkdvivGkiyfllvrikiksmelslikrestGl..aenvakdsetiakyeimDGasvrgesiPirlflsgydltPtlrdvnkkfsvkyylnlvlvdedd 275
                   e l+v+++ e ++G+v i+++ +kk+ehqG+kvel+Gqie++yd+gn ++f+s v++la +G l++s++fpf+f+ ++k+yesY+G nv+lrY++rvt++R++k  +ke+d++v+  +  P +   +k+evGie+clhiefey k+kyh+kd+i+Gk+yfllvrikik+mel++i+re +G+  + +++++set++k+e+mDGa+vrge iPirlf+s++dltPt++++n+kfsvkyylnlvlvd++d
  MMETSP1325-20131115|3224_1  27 GSELLEVFSNTEPVTGTVAINVEPGKKLEHQGVKVELLGQIEMFYDRGNYYEFTSVVRELAAAGALTSSQEFPFDFSGVDKQYESYSGLNVRLRYFIRVTITRNYKRDVKEQDFVVQVVQPPPTSLTAIKMEVGIEECLHIEFEYDKQKYHMKDIIIGKVYFLLVRIKIKHMELNIIRREQAGSgsGGQQYNESETLTKFELMDGAPVRGECIPIRLFMSSLDLTPTYKSINNKFSVKYYLNLVLVDQED 276
                 567789***************************************************************************************************9999************************************************************************9984355789********************************************************997 PP

>> PF00339.24  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.3   5.2e-05      0.23      16     143 ..      38     145 ..      28     150 .. 0.60
   2 ?    0.9   0.0     0.073   3.3e+02       2      37 ..     166     200 ..     165     227 .. 0.77
   3 ?   -1.4   0.0      0.37   1.7e+03      69     140 ..     275     285 ..     240     296 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5.2e-05
                 --B---EE-..TTTS..TTSEEEEEEEEEEEE---STT-----EEEEEEST-SST.-S---HHHHHHHHH........----EE---B---TTS----EE-----EEEEEEEES...S---T.TTEEEEEE CS
  PF00339.24  16 epvsGkVll..etkkpikvrkvklqlkGrartgweesevkglkfrkqvlekvnysakeeylktqesllkkkdgenelpaGehefpFsfeLPknlPsSfegqpGgirYevkaeldrpwekdkk.kkkvftvi 143
                 epv+G+V +  e  k+++ + vk++l G++++  +  + ++ +f++           ++ l+ +  l               efpF f   ++   S++g +   rY++++++ r++++d k +  v++v+
  MMETSP1325-20131115|3224_1  38 EPVTGTVAInvEPGKKLEHQGVKVELLGQIEMFYD--RGNYYEFTS----------VVRELAAAGALT-----------SSQEFPFDFSGVDKQYESYSGLNVRLRYFIRVTITRNYKRDVKeQDFVVQVV 145
                 66666666533334444446666666665555544..222222221..........122222222222...........347999999999999999999999**********999888877344455555 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.073
                 EEEE---EEEE-SS--B---EE-.TTTS..TTSEEEE CS
  PF00339.24   2 eieldkrdevyhpgepvsGkVll.etkkpikvrkvkl 37 
                 +ie++ +++ yh+ + + GkV +   +   k++ ++l
  MMETSP1325-20131115|3224_1 166 HIEFEYDKQKYHMKDIIIGKVYFlLVRI--KIKHMEL 200
                 6899999999***********9844444..4444444 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.37
                 .-S---HHHHHHHHH........----EE---B---TTS----EE-----EEEEEEEES...S---TTTEEE CS
  PF00339.24  69 akeeylktqesllkkkdgenelpaGehefpFsfeLPknlPsSfegqpGgirYevkaeldrpwekdkkkkkvf 140
                 ++++y+k+qe                                                             +
  MMETSP1325-20131115|3224_1 275 EDRRYFKQQE-------------------------------------------------------------V 285
                 2334444333.............................................................2 PP

>> PF02752.17  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   6.6e-05       0.3      24      92 ..      44     147 ..      34     287 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 6.6e-05
                 EEEEEEE----EEEEEEEEEEEEEE--SS.............................................S--EEEEEEEEEE----...............B-TTEE.EEEEEEE.-- CS
  PF02752.17  24 invkisndskkkikkikvslvervtyvsknrsr.........................................dnkkeknvvaksenknvk.............dqpaeatplettinlslP 92 
                 + +++++ +k+ ++ +kv+l+ ++++++ ++++                                         +                              ++++e++ +   +++ +P
  MMETSP1325-20131115|3224_1  44 VAINVEPGKKLEHQGVKVELLGQIEMFYDRGNYyeftsvvrelaaagaltssqefpfdfsgvdkqyesysglnvR----------------LryfirvtitrnykRDVKEQD-FV--VQVVQP 147
                 6677779**********************9955555555555555555555555555555555544444444331................022222223332222333332.22..444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.57
# Mc/sec: 1388.23
//
Query:       MMETSP1325-20131115|3192_1  [L=507]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-62  206.6   0.0    8.9e-30  102.6   0.0    2.4  2  PF13905.1  Thioredoxin-like
      3e-34  115.9   0.8      5e-34  115.3   0.6    1.4  1  PF00240.18 Ubiquitin family
    3.3e-24   85.1   0.0    2.3e-11   43.7   0.0    2.3  2  PF13098.1  Thioredoxin-like domain
    9.9e-21   73.5   0.0    5.4e-10   38.9   0.0    2.5  2  PF00578.16 AhpC/TSA family
    1.8e-19   69.6   0.0    1.3e-09   37.6   0.0    2.3  2  PF08534.5  Redoxin
    1.2e-18   66.4   0.5    2.4e-18   65.4   0.3    1.5  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
    2.4e-18   65.6   0.0    2.9e-06   26.7   0.0    4.3  4  PF00085.15 Thioredoxin
    1.1e-08   34.8   0.0     0.0065   16.3   0.0    3.0  2  PF13899.1  Thioredoxin-like
    2.9e-08   33.4   0.0    4.2e-05   23.1   0.0    2.3  2  PF02630.9  SCO1/SenC
     0.0077   15.2   0.3       0.61    9.1   0.0    2.9  3  PF10589.4  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
  ------ inclusion threshold ------
      0.016   14.8   0.0      0.035   13.7   0.0    1.5  1  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
      0.036   13.6   0.0      0.057   13.0   0.0    1.3  1  PF13019.1  Telomere stability and silencing
      0.052   13.3   0.0        3.6    7.4   0.0    2.7  2  PF07449.6  Hydrogenase-1 expression protein HyaE
      0.065   13.3   0.0       0.13   12.4   0.0    1.5  1  PF10302.4  DUF2407 ubiquitin-like domain
      0.073   12.8   0.0       0.14   11.9   0.0    1.5  1  PF11470.3  GLUT4 regulating protein TUG
      0.078   12.6   0.0       0.23   11.1   0.0    1.7  1  PF02017.10 CIDE-N domain
       0.11   12.3   0.1         14    5.5   0.0    3.0  3  PF13462.1  Thioredoxin


Domain annotation for each model (and alignments):
>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.6   0.0   1.1e-32   8.9e-30       1      95 [.     112     205 ..     112     206 .. 0.97
   2 !  101.6   0.0   2.3e-32   1.8e-29       1      95 [.     253     347 ..     253     348 .. 0.97

  Alignments for each domain:
  == domain 1    score: 102.6 bits;  conditional E-value: 1.1e-32
   PF13905.1   1 gkivllyfaaswcppckaftpelkelyeklkaskdkveivyVsldrdeeefkkylkknkkpwlavpfndkr.rnklkklykvkaiPtlvvldkdge 95 
                 gk++llyf+a+wcppc+ ftp+l e+y+++kas+++veiv++s+drd+ +f +y++++  p +a+p++    ++kl k++kv++iP+l+vld+dg+
  MMETSP1325-20131115|3192_1 112 GKVTLLYFSAHWCPPCRGFTPKLSEYYNTYKASDKNVEIVFISSDRDQAAFDEYFGEM--PLTALPYDARAaKDKLSKKFKVSGIPSLIVLDEDGT 205
                 69********************************************************..********997688********************96 PP

  == domain 2    score: 101.6 bits;  conditional E-value: 2.3e-32
   PF13905.1   1 gkivllyfaaswcppckaftpelkelyeklka.skdkveivyVsldrdeeefkkylkknkkpwlavpfndkr.rnklkklykvkaiPtlvvldkdge 95 
                 gk+++lyf+a+wcppc+ ftp+l ely+++ka  +d++e++++s+drd+ +f +y++++  pwla+p+++ + +n+l ++++v++iP+lvv+d  g+
  MMETSP1325-20131115|3192_1 253 GKTLALYFSAHWCPPCRGFTPKLAELYNTMKAsGRDDFEFIFISSDRDQAAFDEYHAEM--PWLALPYDNRKaKNALSSMFDVSGIPSLVVVDAEGN 347
                 699*****************************999************************..*********88799******************9997 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.3   0.6   6.2e-37     5e-34       1      69 []       4      72 ..       4      72 .. 0.99

  Alignments for each domain:
  == domain 1    score: 115.3 bits;  conditional E-value: 6.2e-37
                EESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
  PF00240.18  1 ktlsgktitlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69
                ktl+gktitl+vepsdt++++K+ki++kegip+dqqrLi++Gk+LeD+rtls+yniq++stlhlvlrlr
  MMETSP1325-20131115|3192_1  4 KTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 72
                89*****************************************************************87 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.0   2.8e-14   2.3e-11       5      97 ..     112     208 ..     109     215 .. 0.82
   2 !   38.9   0.0   8.7e-13     7e-10       4      98 ..     252     351 ..     248     365 .. 0.76

  Alignments for each domain:
  == domain 1    score: 43.7 bits;  conditional E-value: 2.8e-14
   PF13098.1   5 gkrvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdge..........kevkleekelgrklgvrgtPtivfldgeGklva 97 
                 gk ++++f++ +Cp C+ + ++l ++ ++ k  ++++e+++++ d+++    a++d  ++           + ++ +++l +k++v+g P++++ld++G+l++
  MMETSP1325-20131115|3192_1 112 GKVTLLYFSAHWCPPCRGFTPKLSEYYNTYKASDKNVEIVFISSDRDQ----AAFD--EYfgempltalpYDARAAKDKLSKKFKVSGIPSLIVLDEDGTLIT 208
                 899******************************************766....3333..222223334444455678889********************9875 PP

  == domain 2    score: 38.9 bits;  conditional E-value: 8.7e-13
   PF13098.1   4 ngkrvivvftdpdCpyCkklhkelkklnd.vtkylkdkfeviyvnidkskersea......vld..kdgekevkleekelgrklgvrgtPtivfldgeGklvar 98 
                 +gk ++++f++ +Cp C+ + ++l +l +  +   +d+fe+i+++ d+++ +  +      +l+   d+    +  +++l   ++v+g P++v++d+eG+++++
  MMETSP1325-20131115|3192_1 252 EGKTLALYFSAHWCPPCRGFTPKLAELYNtMKASGRDDFEFIFISSDRDQAAFDEyhaempWLAlpYDN----RKAKNALSSMFDVSGIPSLVVVDAEGNTINK 351
                 79***********************9977366667999********96663211122333355554333....346779********************98865 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.0   6.7e-13   5.4e-10      14     122 ..     101     207 ..      88     209 .. 0.80
   2 !   32.0   0.0   8.8e-11     7e-08      16     120 ..     244     347 ..     232     351 .. 0.77

  Alignments for each domain:
  == domain 1    score: 38.9 bits;  conditional E-value: 6.7e-13
  PF00578.16  14 dgkkvslsdl.kgkpvvLffypkdfcpvCttelpalaelyeefk..kkgvevigvsvdspeshkkfaekne......lnfpllsDeegevakaygvlneekglalratfvidkegkir 122
                 dg+    +d+ +gk+++L+f ++ +cp+C+   p+l+e+y+ +k  +k+ve++ +s+d  +  ++f e  +      l+++  +  + +++k+++v        +++++v+d++g++ 
  MMETSP1325-20131115|3192_1 101 DGERP-TADVlSGKVTLLYFSAH-WCPPCRGFTPKLSEYYNTYKasDKNVEIVFISSDRDQ--AAFDEYFGempltaLPYDARA-AKDKLSKKFKVS------GIPSLIVLDEDGTLI 207
                 43444.455559***********.*******************955679999999999888..566666666556555555333.7999********......9***********975 PP

  == domain 2    score: 32.0 bits;  conditional E-value: 8.8e-11
  PF00578.16  16 kkvslsdlkgkpvvLffypkdfcpvCttelpalaelyeefkkk...gvevigvsvdspeshkkfaekne..lnfpllsD...eegevakaygvlneekglalratfvidkegk 120
                 + v  s l+gk++ L+f ++ +cp+C+   p+laely+ +k+    ++e+i +s+d  ++  +f e +     + l +D    ++++++ ++v        +++++v+d eg+
  MMETSP1325-20131115|3192_1 244 GMVPASALEGKTLALYFSAH-WCPPCRGFTPKLAELYNTMKASgrdDFEFIFISSDRDQA--AFDEYHAemPWLALPYDnrkAKNALSSMFDVS------GIPSLVVVDAEGN 347
                 55788999************.********************8733368*******99984..44444433233344455444566666666666......9********9997 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   1.7e-12   1.3e-09      12     128 ..      96     207 ..      78     221 .. 0.80
   2 !   29.6   0.0   4.7e-10   3.8e-07      21     129 ..     246     351 ..     240     365 .. 0.74

  Alignments for each domain:
  == domain 1    score: 37.6 bits;  conditional E-value: 1.7e-12
                 ----TT---EEHHHHTTSEEEEE---------IIIIIHHHHTH..HHH.HH----EEEEE-SS-HH.HHHHHHHTT.TSEEE--...----HHHHHT..-EE------EE--EEEEEE---EE CS
   PF08534.5  12 plvatdgktvslsdfkgkkvvlvfvpgafcptCsaehpylekl..aklakekgvdvvavvaqndaf.vkeawakeglkipvlsD...esasfakalglrltedasagirtpryavidedgkvv 128
                  l+++dg+  + + + gk+++l+f +  +cp+C+  +p l ++  + +a++k+v++v+++++ d+    e  ++  l   + +D   ++ +++k++++          ++p+++v+dedg ++
  MMETSP1325-20131115|3192_1  96 VLLTKDGERPTADVLSGKVTLLYFSAH-WCPPCRGFTPKLSEYynTYKASDKNVEIVFISSDRDQAaFDEYFGEMPL-TALPYDaraAKDKLSKKFKVS---------GIPSLIVLDEDGTLI 207
                 45678888888888*************.**********888884444557899999999999999988888888553.3346665558899******99.........************776 PP

  == domain 2    score: 29.6 bits;  conditional E-value: 4.7e-10
                 EEHHHHTTSEEEEE---------IIIIIHHHHTHHHH.HH--...--EEEEE-SS-HHHHHHHHHTT.TSEEE--...----HHHHHT..-EE------EE--EEEEEE--.-EEE CS
   PF08534.5  21 vslsdfkgkkvvlvfvpgafcptCsaehpyleklaklakekg...vdvvavvaqndafvkeawakeglkipvlsD...esasfakalglrltedasagirtpryavidedg.kvvy 129
                 v  s+++gk++ l+f +  +cp+C+  +p l++l++  k+ g   +++++++++ d+ + +    e +   + +D   ++ +++ ++++          ++p+++v+d++g  + +
  MMETSP1325-20131115|3192_1 246 VPASALEGKTLALYFSAH-WCPPCRGFTPKLAELYNTMKASGrddFEFIFISSDRDQAAFDEYHAEMPWLALPYDnrkAKNALSSMFDVS---------GIPSLVVVDAEGnTINK 351
                 56789*************.**********8888866666654222677777777777744444444434555889766778888888877.........9***********44444 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.3     3e-21   2.4e-18       3      72 .]       1      69 [.       1      69 [. 0.99

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 3e-21
                EEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE- CS
   PF11976.3  3 ivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvvi 72
                i++k+ +gk+++++V+p++t+++++++ ++k+gip+ +q+rLiF G++L++ +t+ d++i++++t+++v+
  MMETSP1325-20131115|3192_1  1 IFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 69
                89**********************************.******************************996 PP

>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   3.6e-09   2.9e-06      16      62 ..     111     159 ..      98     176 .. 0.82
   2 ?    5.7   0.0     0.012       9.9      57      90 ..     177     211 ..     159     217 .. 0.75
   3 !   24.6   0.0   1.6e-08   1.3e-05      19      69 ..     254     308 ..     246     325 .. 0.79
   4 ?    3.9   0.0     0.046        37      60      85 ..     323     348 ..     301     365 .. 0.74

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 3.6e-09
                 HHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-...TSEEEEEETTTTH CS
  PF00085.15  16 ksdklvlvefyApwCGhCkalaPeyeklaeelke...kvvlakvdvdenk 62 
                 +  k  l+ f A+wC +C+ + P++ +  +++k+   +v ++ +  d  +
  MMETSP1325-20131115|3192_1 111 S-GKVTLLYFSAHWCPPCRGFTPKLSEYYNTYKAsdkNVEIVFISSDRDQ 159
                 4.6899***************************99996666666555544 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.012
                 ETT.TTHHHHHHTT--SSSEEEEESSSSEEEEE-- CS
  PF00085.15  57 dvd.enkdlaseygvegiPtlklfkngkkveeveg 90 
                 d+  ++++l+++++v+giP l+++ ++++  + +g
  MMETSP1325-20131115|3192_1 177 DARaAKDKLSKKFKVSGIPSLIVLDEDGTLITADG 211
                 5552456899************9998887665555 PP

  == domain 3    score: 24.6 bits;  conditional E-value: 1.6e-08
                 SCEEEEEE-TT---HHHHHHHHHHHHHHTT-....TSEEEEEETTTTHHHHHHTT CS
  PF00085.15  19 klvlvefyApwCGhCkalaPeyeklaeelke....kvvlakvdvdenkdlaseyg 69 
                 k++ + f A+wC +C+ + P++++l +++k+    ++ ++ +  d  +   +ey+
  MMETSP1325-20131115|3192_1 254 KTLALYFSAHWCPPCRGFTPKLAELYNTMKAsgrdDFEFIFISSDRDQAAFDEYH 308
                 777899************************9999977777777777776666666 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.046
                 TTHHHHHHTT--SSSEEEEESSSSEE CS
  PF00085.15  60 enkdlaseygvegiPtlklfkngkkv 85 
                 +++ l+s ++v+giP l+++ ++++ 
  MMETSP1325-20131115|3192_1 323 AKNALSSMFDVSGIPSLVVVDAEGNT 348
                 5678999***********99876554 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0     2e-05     0.016      17      68 ..     112     174 ..     110     202 .. 0.61
   2 !   16.3   0.0   8.1e-06    0.0065      14      82 .]     250     344 ..     245     344 .. 0.69

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2e-05
   PF13899.1  17 gkpllvifgadwcpdCqaldrdvlsd.eevkaalaekfvllrvdvterdanl...........e 68 
                 gk  l++f a wcp+C+ +   + +   + ka  +++++++++  ++ +a              
  MMETSP1325-20131115|3192_1 112 GKVTLLYFSAHWCPPCRGFTPKLSEYyNTYKA-SDKNVEIVFISSDRDQAAFdeyfgempltaL 174
                 7889***************9997666255555.99*******9996444422433333333330 PP

  == domain 2    score: 16.3 bits;  conditional E-value: 8.1e-06
   PF13899.1  14 reegkpllvifgadwcpdCqaldrdvlsd.eevkaalaekfvllrvdv.....................terdanleldr.........qgvPvvvfldp 82 
                 + egk+l ++f a wcp+C+ +   +++   ++ka  +++f++ ++                       ++r+a     +          g+P +v++d+
  MMETSP1325-20131115|3192_1 250 ALEGKTLALYFSAHWCPPCRGFTPKLAELyNTMKASGRDDFEFIFISSdrdqaafdeyhaempwlalpyDNRKA-----KnalssmfdvSGIPSLVVVDA 344
                 5689******************9887666589999889*******99966666664444444444444422222.....023333344577999988885 PP

>> PF02630.9  SCO1/SenC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   5.3e-08   4.2e-05      38     136 ..      98     191 ..      79     198 .. 0.82
   2 !    7.8   0.0    0.0025         2      46      98 ..     247     299 ..     237     313 .. 0.87

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 5.3e-08
                 EB----EEETGGG----EEEEEE-SSSSSS-SSTHHHHHHHHHHHHHTTTT-EEEEEESSTTTS-HHHHHHHHTTST--GGGEEEEB---HHHHHHHHH CS
   PF02630.9  38 idlkgkkfeeenLkGklsliyFgftncpdicpealekltdllkkLkeekidvqvvfisvDPerDtpevlkeylknfdesfigltgtveeikevakkfkv 136
                    +g++ + + L Gk+ l+yF    cp  c   + kl +  ++ k+  ++v++vfis D  rD++    ey  +++   + ++ +  +  ++ kkfkv
  MMETSP1325-20131115|3192_1  98 LTKDGERPTADVLSGKVTLLYFSAHWCP-PCRGFTPKLSEYYNTYKASDKNVEIVFISSD--RDQA-AFDEYFGEMPLTALPYDARAAK-DKLSKKFKV 191
                 567899999******************7.69***************************99..6654.4577777777776666666544.345566665 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0025
                 ETGGG----EEEEEE-SSSSSS-SSTHHHHHHHHHHHHHT.TTT-EEEEEESST CS
   PF02630.9  46 eeenLkGklsliyFgftncpdicpealekltdllkkLkee.kidvqvvfisvDP 98 
                     L+Gk   +yF    cp  c   + kl +l +++k+  + d + +fis D 
  MMETSP1325-20131115|3192_1 247 PASALEGKTLALYFSAHWCP-PCRGFTPKLAELYNTMKASgRDDFEFIFISSDR 299
                 45679**************7.699****************999********994 PP

>> PF10589.4  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.089        72      15      24 ..     120     129 ..     120     140 .. 0.76
   2 !    9.1   0.0   0.00075      0.61      15      41 ..     261     287 ..     261     300 .. 0.87
   3 ?   -1.7   0.0       1.9   1.5e+03      29      44 ..     412     428 ..     410     429 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.089
                 -----HHHH- CS
   PF10589.4  15 SCGkCtPCRi 24 
                 S+ +C PCR 
  MMETSP1325-20131115|3192_1 120 SAHWCPPCRG 129
                 6679*****5 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00075
                 -----HHHH-----HHHHHHH------ CS
   PF10589.4  15 SCGkCtPCRiGttrlvelldriargeg 41 
                 S+ +C PCR  t+ l+el   + ++++
  MMETSP1325-20131115|3192_1 261 SAHWCPPCRGFTPKLAELYNTMKASGR 287
                 6679******************77665 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 1.9
                 HHHHHHH-.------HH CS
   PF10589.4  29 lvelldri.argegrad 44 
                 l e+ + i a+g++++d
  MMETSP1325-20131115|3192_1 412 LLEVAEEIaAKGKQTED 428
                 679999**777887765 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.4e-05     0.035      18      88 ..      13      70 ..       3      83 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.4e-05
                EEE-TT-BHHHHHHHHHHHS-TT------SGGGEEEE----B--TTSBGGGGS--TTS-----EEEEEEE- CS
   PF13881.1 18 fkfseattvaelkekvlaeWpkekeskpksandlklilaGkiLednktLkelrlplgevkggvtvmHvvvr 88
                + +++++t++++k+k+     ++ke  p  +++ +li aGk Led +tL++++++ +       ++H+v+r
  MMETSP1325-20131115|3192_1 13 LDVEPSDTIENVKQKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKES------TLHLVLR 70
                5567888888888888.....5666655..44559*****************665554......4777765 PP

>> PF13019.1  Telomere stability and silencing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.1e-05     0.057       3      88 ..       1      74 [.       1      76 [. 0.86

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7.1e-05
   PF13019.1  3 vlvssldglslpktlsltlpstatvsdlvdklserlpaslteslvLtttsnkqlssssdlslssllsssedaeflslrlslrlcGG 88
                ++v++l+g    kt++l ++++ t++++ +k++++ ++++++++++  +  kql  ++  +ls++  ++e+    +l+l+lrl+GG
  MMETSP1325-20131115|3192_1  1 IFVKTLTG----KTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIF-A-GKQL--EDGRTLSDYNIQKES----TLHLVLRLRGG 74
                79999999....9**************************99865443.3.4566..788889999888888....99********9 PP

>> PF07449.6  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0045       3.6      68      94 ..     179     205 ..     165     211 .. 0.87
   2 ?    2.7   0.0      0.13     1e+02      69      91 ..     322     344 ..     313     351 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0045
   PF07449.6  68 reqeealaerfgvlrlPsllflrdgey 94 
                 r+ +++l ++f+v+ +Psl++l ++ +
  MMETSP1325-20131115|3192_1 179 RAAKDKLSKKFKVSGIPSLIVLDEDGT 205
                 67899****************998765 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.13
   PF07449.6  69 eqeealaerfgvlrlPsllflrd 91 
                 + ++al + f v+ +Psl+++  
  MMETSP1325-20131115|3192_1 322 KAKNALSSMFDVSGIPSLVVVDA 344
                 567899*************9965 PP

>> PF10302.4  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00016      0.13      15      64 ..      12      57 ..       2     109 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00016
   PF10302.4 15 rldinspnsltvaeLkrliRerlpgdlsrrrLrlIyaGkvLndesalasd 64
                +ld++   s t+++ k+ i+++ +   +  + rlI+aGk L+d  +l++ 
  MMETSP1325-20131115|3192_1 12 TLDVE--PSDTIENVKQKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDY 57
                56666..899***********9955544..4578**********999875 PP

>> PF11470.3  GLUT4 regulating protein TUG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00018      0.14       5      65 .]       7      67 ..       3      67 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00018
   PF11470.3  5 nfrrvkvkvtpsttltqVleeackkfkldsneytLkhnnkpldlslpfRlanLpngakLeL 65
                ++++ ++ v+ps+t+  V ++   k ++ +++ +L + +k+l+   ++   n+   + L L
  MMETSP1325-20131115|3192_1  7 TGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 67
                68999*************************************9888888888887777765 PP

>> PF02017.10  CIDE-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00028      0.23      28      55 ..     183     210 ..     179     218 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00028
  PF02017.10  28 sKvleilelkkklvtLvLeeDGTevdde 55 
                 +K  ++++++  ++ +vL+eDGT ++ +
  MMETSP1325-20131115|3192_1 183 DKLSKKFKVSGIPSLIVLDEDGTLITAD 210
                 6888999999999************966 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.017        14      14      53 ..     113     153 ..     110     164 .. 0.79
   2 ?   -0.7   0.0       1.4   1.1e+03     125     144 ..     181     203 ..     175     211 .. 0.75
   3 ?    2.5   0.0      0.14   1.1e+02      19      59 ..     258     299 ..     253     312 .. 0.68

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.017
   PF13462.1  14 pvtvieyadltCphCarfheevekllekyidtg.kvkfiyr 53 
                 +vt+  ++   Cp C+ f  ++ +  + y  ++ +v+++++
  MMETSP1325-20131115|3192_1 113 KVTLLYFSAHWCPPCRGFTPKLSEYYNTYKASDkNVEIVFI 153
                 899999999*************9999998555546666665 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1.4
   PF13462.1 125 adseeakaagiestPtfii...n 144
                 a ++  k+ ++++ P++i+   +
  MMETSP1325-20131115|3192_1 181 AKDKLSKKFKVSGIPSLIVldeD 203
                 55677899**********95444 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.14
   PF13462.1  19 eyadlt.CphCarfheevekllekyidtgkvkfiyrefpldk 59 
                 +y++   Cp C+ f  ++ +l +    +g+  f ++    d+
  MMETSP1325-20131115|3192_1 258 LYFSAHwCPPCRGFTPKLAELYNTMKASGRDDFEFIFISSDR 299
                 5555433***********999988766775444444444454 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.91u 0.33s 00:00:01.24 Elapsed: 00:00:00.68
# Mc/sec: 1786.70
//
Query:       MMETSP1325-20131115|3231_1  [L=485]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0056   16.0  17.2     0.0056   16.0  11.9    3.1  3  PF10500.4  Nuclear RNA-splicing-associated protein
  ------ inclusion threshold ------
      0.029   13.7  31.1      0.082   12.3  12.1    2.5  2  PF06658.7  Protein of unknown function (DUF1168)
       0.08   12.7  19.9       0.46   10.3   4.4    2.3  2  PF11818.3  C-terminal domain of tail specific protease (DUF3340)
        0.2   11.8   2.4       0.23   11.6   0.1    2.2  2  PF10600.4  PDZ-associated domain of NMDA receptors
       0.31   10.3  22.8      0.095   12.0   5.6    2.3  2  PF14153.1  Spore coat protein CotO
       0.66    9.3  21.9      0.022   14.1   8.2    2.3  2  PF03286.9  Pox virus Ag35 surface protein
        1.3    8.5  27.8      0.027   13.9  12.7    2.3  2  PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
        2.2    6.9  21.4       0.16   10.6   4.0    2.3  2  PF01698.11 Floricaula / Leafy protein


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0  11.9   3.3e-06    0.0056      65     128 ..      64     132 ..      31     139 .. 0.56
   2 ?   -5.7   8.5         8   1.4e+04      87     118 ..     301     331 ..     283     367 .. 0.44
   3 ?   -7.9  10.7         8   1.4e+04       8      88 ..     315     408 ..     310     417 .. 0.44

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 3.3e-06
   PF10500.4  65 sssssssss..sssssskseekrkkr...kkkkkkrekkkekkekkklkkkgkkkeaeerrvkeaapep 128
                 sss  s+ +  s ++++++ + + +r   ++k +k++k+ ek++kkk kkk+kk+++e++++++a+ ep
  MMETSP1325-20131115|3231_1  64 SSSRPSTLPrkSVAEEEAATAAKERRekkERKLEKEKKREEKERKKKDKKKEKKAKKEAQAQAQADDEP 132
                 333334333013333443333333330003333343344444445555555555556666666666555 PP

  == domain 2    score: -5.7 bits;  conditional E-value: 8
   PF10500.4  87 krkkkkkkrekkkekkekkklkkkgkkkeaee 118
                 kr++ +++  ++ ++k+ ++++++++k+++  
  MMETSP1325-20131115|3231_1 301 KREQDQQQ-LQQARQKQLQQQQQQQQKRASGS 331
                 22222222.23333333333333333333222 PP

  == domain 3    score: -7.9 bits;  conditional E-value: 8
   PF10500.4   8 rsrsrgkesekrrrssssssaks.rseksrkksksskesrkkrekkkkkrrers............ssssssssssssssssssskseekrkkr 88 
                 + +++ ++++++r s+s  s  +  + + + + ++sk++ ++++ k k   + +            ssss s+ s +s    s  +  ++ ++r
  MMETSP1325-20131115|3231_1 315 KQLQQQQQQQQKRASGSPQSLVDlGGLSLNASDAESKKAPTSQAEKDKLAGKNAaftslmgdvglgSSSSLSAPSGTSKPYQSMDSMMSNEQRR 408
                 4444433444444444444433303333344444455544444333332222223667888888755555555555554433333333444444 PP

>> PF06658.7  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  12.1   4.8e-05     0.082      58     112 ..      74     128 ..      65     146 .. 0.70
   2 ?    6.8   3.9    0.0024       4.1      49      86 ..     290     327 ..     276     369 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.8e-05
   PF06658.7  58 evkkekedeefqqkreekekkdeektaKkrekRekkkqkkkkkkkkkkeekkeek 112
                 ++  e+e +   ++r+ek++++ ek +K+ ek  kkk kkk+kk kk+++++++ 
  MMETSP1325-20131115|3231_1  74 KSVAEEEAATAAKERREKKERKLEKEKKREEKERKKKDKKKEKKAKKEAQAQAQA 128
                 5556666777777777777777888888888877777777777777777733333 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0024
   PF06658.7  49 yeRlelmdeevkkekedeefqqkreekekkdeektaKk 86 
                 + Rl++ d++ k+e+ +++ qq r+++ ++++++ +K+
  MMETSP1325-20131115|3231_1 290 AVRLQQPDRQLKREQDQQQLQQARQKQLQQQQQQQQKR 327
                 55778888888888888888877777777777777776 PP

>> PF11818.3  C-terminal domain of tail specific protease (DUF3340)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.4   0.00027      0.46      64     123 ..      85     131 ..      65     158 .. 0.55
   2 ?    8.1   3.9    0.0012       2.1      51     125 ..     269     361 ..     244     370 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00027
   PF11818.3  64 lkeeredktvsLneeerkaereeaekkrlkrenkrrkakgeeplkslddlekdkaeeeee 123
                 +ke+re+k+  L++e+              re+k rk+k++++ k+ ++  + +a+++ e
  MMETSP1325-20131115|3231_1  85 AKERREKKERKLEKEKK-------------REEKERKKKDKKKEKKAKKEAQAQAQADDE 131
                 33444444444444443.............333333333333333222221111123444 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0012
   PF11818.3  51 dpeFkyleedlkllkeeredktvsLneeerkaereeaekkrlkrenkrrkakgeeplksld.................dlekdkae..eeeekD 125
                   ++ +++ ++++ ++ ++ ++v L++ +r+ +re+++++  ++ +k+ +++++++ k  +                 d+e++k +  +++ekD
  MMETSP1325-20131115|3231_1 269 RATYAMMNGNMNVQQQMHQMQAVRLQQPDRQLKREQDQQQLQQARQKQLQQQQQQQQKRASgspqslvdlgglslnasDAESKK-AptSQAEKD 361
                 56788999999999********************98888855555555555544444444234445555555555443222222.235666666 PP

>> PF10600.4  PDZ-associated domain of NMDA receptors
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00013      0.23      18      63 ..      34      81 ..      32      84 .. 0.92
   2 ?   -2.4   0.1       3.1   5.3e+03      18      36 ..     393     410 ..     384     428 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00013
                XXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXX--- CS
   PF10600.4 18 ssysqhmdnhishssylgt..dykqalpPvsprRYSPipkgllgeddi 63
                ssys    + i ++sy g+   y   + P+s++R S +p++ ++e++ 
  MMETSP1325-20131115|3231_1 34 SSYSGGGSSGIGSNSYGGSsgSYRDNAGPTSSSRPSTLPRKSVAEEEA 81
                78999999999999*9999999***********************985 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 3.1
                 XXXXXXXXXXXXXXXXXXX CS
   PF10600.4  18 ssysqhmdnhishssylgt 36 
                 + y q md+ +s++   g+
  MMETSP1325-20131115|3231_1 393 KPY-QSMDSMMSNEQRRGM 410
                 344.788988888877775 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   5.6   5.5e-05     0.095      62     117 ..      74     129 ..      57     159 .. 0.67
   2 ?    4.1   4.7     0.015        25      20      73 ..     286     327 ..     253     406 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.5e-05
   PF14153.1  62 aeveseeeaeeaesedeqesseqeeiaqeveeeeeeeeekqeevekekeaekeete 117
                 + v++ee a +a++  e+++++ e+ ++ +e+e +++++k+e+++k++++++++++
  MMETSP1325-20131115|3231_1  74 KSVAEEEAATAAKERREKKERKLEKEKKREEKERKKKDKKKEKKAKKEAQAQAQAD 129
                 34455555555556666666666665666666666666666665555555444444 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.015
   PF14153.1  20 leekkakmQktfikkkkkkkeeekensnekkkekeeeqkeekaeveseeeaeea 73 
                  +++++ +Q+  ++ k+++++++ +++             +k+++++++++++ 
  MMETSP1325-20131115|3231_1 286 HQMQAVRLQQPDRQLKREQDQQQLQQAR------------QKQLQQQQQQQQKR 327
                 1111111111111111111111111111............11111111111111 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   8.2   1.3e-05     0.022      55     123 ..      67     132 ..      59     159 .. 0.72
   2 ?    0.6   1.7      0.18     3e+02      80     112 ..     296     328 ..     251     374 .. 0.52

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.3e-05
   PF03286.9  55 krkttkrkpvkkkkskkkekekeeeeekkeeededkdteenendddekeeskdskesasaneqsdedde 123
                 +  t +rk v++++++ + ke+ e++e+k e+++++  ee+e ++++k+++k++k++a a++q  +d+ 
  MMETSP1325-20131115|3231_1  67 RPSTLPRKSVAEEEAATAAKERREKKERKLEKEKKR--EEKERKKKDKKKEKKAKKEAQAQAQA-DDEP 132
                 336789************9*9999777777776666..66666667777777777777777777.3333 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.18
   PF03286.9  80 eekkeeededkdteenendddekeeskdskesa 112
                  +++ + ++d+++ ++  +++ +++++++++ a
  MMETSP1325-20131115|3231_1 296 PDRQLKREQDQQQLQQARQKQLQQQQQQQQKRA 328
                 222222222221111111111111111111111 PP

>> PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9  12.7   1.6e-05     0.027     128     185 ..      66     121 ..      27     133 .. 0.58
   2 ?   -0.3   1.3      0.38   6.5e+02     138     163 ..     301     326 ..     263     368 .. 0.48

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.6e-05
                 X..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.... CS
   PF08208.6 128 kppeelgseseesekektakkekeaeveeeekkekkkkkevkkekkekKsKkekteke 185
                 + p++l ++s ++e+  ta ke+++++e++ +kekk++++++k+k++kK+Kk k  ke
  MMETSP1325-20131115|3231_1  66 SRPSTLPRKSVAEEEAATAAKERREKKERKLEKEKKREEKERKKKDKKKEKKAK--KE 121
                 344555555555555555555555555444444444444445555555555555..22 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.38
                 XXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF08208.6 138 eesekektakkekeaeveeeekkekk 163
                 ++++++++ ++ ++++ ++++++++k
  MMETSP1325-20131115|3231_1 301 KREQDQQQLQQARQKQLQQQQQQQQK 326
                 22222222222222222222222222 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.0   9.3e-05      0.16     156     223 ..      77     146 ..      57     166 .. 0.48
   2 ?    1.9   5.4     0.041        71     125     158 ..     293     326 ..     219     373 .. 0.45

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9.3e-05
  PF01698.11 156 eekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkse..ededeeeeededeegsged 223
                  e+eaa++++e+ +++e + ++ekk+ee+++k++ kk+++k kke++++   d++ +     +++g+g+d
  MMETSP1325-20131115|3231_1  77 AEEEAATAAKERREKKERKLEKEKKREEKERKKKDKKKEKKAKKEAQAQaqADDEPDLLGGGSGSGGGDD 146
                 2344555555554555555444443333333332323323322322222113333333344444445555 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.041
  PF01698.11 125 aekkrrkllsedeetaldalsqeglseepvqeek 158
                  ++  r+l  e+++++l+++ q+ l+++++q++k
  MMETSP1325-20131115|3231_1 293 LQQPDRQLKREQDQQQLQQARQKQLQQQQQQQQK 326
                 0000111111111111111111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2720  (0.198947); expected 273.4 (0.02)
Passed bias filter:                      590  (0.0431539); expected 273.4 (0.02)
Passed Vit filter:                       185  (0.0135313); expected 13.7 (0.001)
Passed Fwd filter:                        79  (0.00577823); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.88u 0.39s 00:00:02.27 Elapsed: 00:00:01.02
# Mc/sec: 1139.44
//
Query:       MMETSP1325-20131115|3233_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-08   33.0  10.0    5.6e-08   32.3   6.9    1.4  1  PF13639.1  Ring finger domain
    2.3e-05   24.3   5.0      5e-05   23.2   3.5    1.6  1  PF12678.2  RING-H2 zinc finger
    3.5e-05   23.4  10.6    6.5e-05   22.5   7.4    1.4  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
     0.0017   17.8   8.0     0.0033   16.9   5.5    1.4  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
     0.0024   17.7  10.1     0.0044   16.9   7.0    1.4  1  PF12906.2  RING-variant domain
  ------ inclusion threshold ------
      0.053   13.0   9.3       0.13   11.7   6.5    1.7  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
        0.1   12.2   4.6       0.16   11.5   3.2    1.3  1  PF05290.6  Baculovirus immediate-early protein (IE-0)
       0.12   12.0   1.1       0.17   11.5   0.7    1.2  1  PF05883.6  Baculovirus U-box/Ring-like domain
       0.18   11.2   2.6       0.43   10.0   1.8    1.6  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
       0.27   11.0   7.0       0.62    9.8   4.9    1.6  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
       0.32   10.8   9.0        1.6    8.6   6.3    2.0  2  PF11793.3  FANCL C-terminal domain
       0.63    9.6   2.6        1.4    8.5   1.8    1.5  1  PF02809.15 Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   6.9   4.9e-11   5.6e-08       2      44 ..      72     119 ..      71     121 .. 0.82

  Alignments for each domain:
  == domain 1    score: 32.3 bits;  conditional E-value: 4.9e-11
   PF13639.1   2 eCaiCldelsegeevvrlpC.....gHvfHeeCldewlrssnsCPlCr 44 
                 eC+iC++ +++ ++++ + C     + +fH+ Cl +w ++++ CP C 
  MMETSP1325-20131115|3233_1  72 ECVICMEVFDDTNPMMPTLCkcgvnKTCFHYACLLSWKEKQDHCPACY 119
                 8********997777744443355559********************6 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   3.5   4.4e-08     5e-05      17      74 ..      67     118 ..      50     119 .. 0.76

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 4.4e-08
   PF12678.2  17 isedn.CaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrktCPlc 74 
                 ++ed  C+iC + ++++ p++       +c v     +  FH  C+ +W +++++CP c
  MMETSP1325-20131115|3233_1  67 APEDLeCVICMEVFDDTNPMMPTLC---KCGV----NKTCFHYACLLSWKEKQDHCPAC 118
                 346645********99886655444...4554....5678******************9 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   7.4   5.7e-08   6.5e-05       2      44 ..      70     118 ..      69     119 .. 0.89

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 5.7e-08
   PF13923.1   2 rfsCpiCleelen.....pviltpCg...HlyCkkCieqwlekskkkCPiC 44 
                 +++C+iC+e + +     p +l++Cg    ++++ C+ +w ek +  CP C
  MMETSP1325-20131115|3233_1  70 DLECVICMEVFDDtnpmmP-TLCKCGvnkTCFHYACLLSWKEK-QDHCPAC 118
                 789********99999966.679999876789***********.******* PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   5.5   2.9e-06    0.0033       2      46 ..      70     121 ..      69     123 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 2.9e-06
   PF13920.1   2 kktCvvCle.....readvlllpCg..HlclCeeCaerllkrkkkCpiCrsp 46 
                 + +Cv+C+e     ++   +l++Cg    c+ ++C  ++++++ +Cp C  p
  MMETSP1325-20131115|3233_1  70 DLECVICMEvfddtNPMMPTLCKCGvnKTCFHYACLLSWKEKQDHCPACYGP 121
                 679******5555446669999**855789999******99********765 PP

>> PF12906.2  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   7.0   3.9e-06    0.0044       1      47 []      73     118 ..      73     118 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 3.9e-06
                 ETTTTEE-----...---------TTS--HHHHHHHHHHHT-SB-S-- CS
   PF12906.2   1 CriCleeeeese.plirpCkCkGslklvHesCleeWlkesaktkCelC 47 
                 C+iC+e  ++ +  + + CkC  +   +H +Cl  W +  ++ +C  C
  MMETSP1325-20131115|3233_1  73 CVICMEVFDDTNpMMPTLCKCGVNKTCFHYACLLSWKE--KQDHCPAC 118
                 ******999988466789******************87..66679888 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   6.5   0.00012      0.13       1      41 []      73     118 ..      73     118 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00012
                 -TTTSSS-SSEE.....BSCTS-E...E-CHHHHHHHCST-----TTT CS
  PF00097.20   1 CpiCleeakepn....elleCkHs...fCskCirkilksrkkvkCPlC 41 
                 C iC+e++ ++n    +l +C+ +   f+++C++++ +  k+  CP C
  MMETSP1325-20131115|3233_1  73 CVICMEVFDDTNpmmpTLCKCGVNktcFHYACLLSWKE--KQDHCPAC 118
                 9*************99888998766568899******9..9999**** PP

>> PF05290.6  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.2   0.00014      0.16      81     128 ..      71     119 ..      54     128 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00014
   PF05290.6  81 yecnicedtsaeerflkPnec.cGykicnlcyanlwkfstvyPvcPvck 128
                  ec ic + + + + + P  c cG +     ya l  + +    cP c 
  MMETSP1325-20131115|3233_1  71 LECVICMEVFDDTNPMMPTLCkCGVNKTCFHYACLLSWKEKQDHCPACY 119
                 58*******************9**9988889*****************5 PP

>> PF05883.6  Baculovirus U-box/Ring-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.7   0.00015      0.17      26      72 ..      70     115 ..      65     131 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00015
   PF05883.6  26 sveCaiCldeieenkGvvavtekgtldleklfhkeClkrfkrekkrD 72 
                  +eC iC++  ++ + ++   +k  ++    fh +Cl  +k+++ + 
  MMETSP1325-20131115|3233_1  70 DLECVICMEVFDDTNPMMPTLCKCGVN-KTCFHYACLLSWKEKQDHC 115
                 58***********88887777777777.568*********7777665 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.8   0.00038      0.43       9      41 ..      69     101 ..      64     117 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00038
                 XX-B-TTT-S.-SS....EEEES.---EEEHHHHH CS
   PF13445.1   9 sifaCpiske.qsteqnpPvvLp.CGhvisreale 41 
                 +++ C i++e +  ++++P++ + C + + + +++
  MMETSP1325-20131115|3233_1  69 EDLECVICMEvF--DDTNPMMPTlCKCGVNKTCFH 101
                 6789******88..468889977787776666665 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   4.9   0.00055      0.62      19      78 ..      68     119 ..      58     126 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00055
   PF12861.2  19 asddvcGicrvsfdGtcpsckfpGddcplvlGkckhnfhlhcilkwletetskglcpmcr 78 
                 ++d  c ic   fd t p   +    c    G  k +fh  c+l w e+   +++cp c 
  MMETSP1325-20131115|3233_1  68 PEDLECVICMEVFDDTNPMMPT---LCK--CGVNKTCFHYACLLSWKEK---QDHCPACY 119
                 6788899999999999997533...343..4778899*********765...68999996 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   6.3    0.0014       1.6       2      44 ..      70     112 ..      69     127 .. 0.87
   2 ?    0.4   0.1       0.5   5.7e+02       3      12 ..     113     122 ..     111     133 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0014
                 --S-SSS--SS--------B--S-TT----B-SGGGHHHHHHH CS
   PF11793.3   2 eveCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrsl 44 
                 ++eC iC+  ++d++ +  + C     +  fH aCL  W +++
  MMETSP1325-20131115|3233_1  70 DLECVICMEVFDDTNPMMPTLCKCGVNKTCFHYACLLSWKEKQ 112
                 579*********999999999988777888*********7665 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.5
                 -S-SSS--SS CS
   PF11793.3   3 veCgiCyayr 12 
                  +C+ Cy   
  MMETSP1325-20131115|3233_1 113 DHCPACYGPL 122
                 5677777544 PP

>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.8    0.0012       1.4       6      16 ..      50      60 ..      50      61 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0012
                HHHHHHHHHHH CS
  PF02809.15  6 dLqlALalSle 16
                +Lq+A+alSl+
  MMETSP1325-20131115|3233_1 50 ELQAAIALSLQ 60
                6*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 728.12
//
Query:       MMETSP1325-20131115|3232_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-07   31.0   0.0    3.1e-07   29.9   0.0    1.5  1  PF05347.10 Complex 1 protein (LYR family)
    3.5e-06   27.0   0.0    7.8e-06   25.9   0.0    1.6  2  PF13232.1  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> PF05347.10  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   4.5e-11   3.1e-07       3      58 ..      15      74 ..      13      75 .. 0.90

  Alignments for each domain:
  == domain 1    score: 29.9 bits;  conditional E-value: 4.5e-11
  PF05347.10  3 vLsLYRalLRaark....fpdynareyirrriReeFrknknvtdpekieallkegkelLe 58
                + +LYR++ ++  +    f+ +    ++r ri + Fr+n +v+d++ +++l+++g+ +Le
  MMETSP1325-20131115|3232_1 15 AVALYRNICKELPRimtiFSLDIPAPVVRGRIADMFRANAHVKDERVVRMLVTKGYLELE 74
                679*********55488888888999******************************9998 PP

>> PF13232.1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   1.1e-09   7.8e-06       5      59 ..      17      75 ..      13      79 .. 0.83
   2 ?   -2.5   0.0      0.83   5.7e+03      39      51 ..      88     100 ..      83     102 .. 0.72

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 1.1e-09
   PF13232.1  5 sLYRalLrearr....fpsyssreyfrrriRdeFrknknvtdpekiakllkegqeeLel 59
                +LYR++ +e  r    f+       +r ri d Fr+n +v+d++ +++l+ +g+ eLe+
  MMETSP1325-20131115|3232_1 17 ALYRNICKELPRimtiFSLDIPAPVVRGRIADMFRANAHVKDERVVRMLVTKGYLELEE 75
                799999999999555544444447799***************************99974 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.83
   PF13232.1  39 nvtdpekiakllk 51 
                 n +dp +++ ++k
  MMETSP1325-20131115|3232_1  88 NKIDPTQLRTHVK 100
                 4678888777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 552.63
//
Query:       MMETSP1325-20131115|3234_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 1075.81
//
Query:       MMETSP1325-20131115|3236_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        71  (0.0051931); expected 273.4 (0.02)
Passed bias filter:                       70  (0.00511995); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 205.40
//
Query:       MMETSP1325-20131115|3228_1  [L=1331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-24   85.7   0.0    1.1e-12   47.8   0.0    3.4  3  PF05193.16 Peptidase M16 inactive domain
      3e-20   72.3   0.2      7e-19   67.9   0.2    2.3  1  PF00675.15 Insulinase (Peptidase family M16)


Domain annotation for each model (and alignments):
>> PF05193.16  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.0   1.7e-16   1.1e-12       2     181 ..     270     472 ..     269     474 .. 0.73
   2 !    2.9   0.0    0.0098        67      20      50 ..     847     886 ..     827     925 .. 0.72
   3 !   30.8   0.0   2.7e-11   1.9e-07      78     183 ..    1033    1142 ..     961    1143 .. 0.84

  Alignments for each domain:
  == domain 1    score: 47.8 bits;  conditional E-value: 1.7e-16
                 H-HHHHHHHHHHHCCGCCEEEEEEESS-HHHHHHHHH...HHHCCSHHHH.................GGG--S-SSEGGGSSEEEEEEECSSS.SCEEEEEEEEEECGGCGTTHHHHHHHHHHHCCCHHHCHHHHHH.............TTTT-..ESEEEEE.EC--S..EEEEEEEEECESHHHHHHHHHHHHHHHHHHT.SSHHHHHHHH CS
  PF05193.16   2 ltredlkdfykkhytpdnmvvvivGdvdheelvklie...kyfgdlpaske..............ppppkptgfplepselkkpevflkdlde.eqahvalafpgppiesdpdsialkvlnelLgggassrLftelr.............eksgl..aysvsaf.ldsysdsglfgisatadpekvekavdvilnelrrlkengiteeelerak 181
                  + ++++dfy+k+y+p+ m+vv+vGd+d  e ++++e   + f+ +p   +                 p p  + ++++ +  p+  +  l+  e ++ +++ +   +       + ++l ++  +    rLft+l+             +k g+  + ++ +  + ++++++ +   ++ dp+ +  a++++++e  r +e+g+t++el+ ak
  MMETSP1325-20131115|3228_1 270 CDPQVIRDFYRKWYRPELMAVVVVGDIDRLEQEHVLEairSTFAVIP---GdltdagtpsngidnG--PRPLAPLPTVELPRHPHDLVLVLEDaELTQTSVSLEFFEK-----LTVANTLTHVRSDV-VKRLFTTLVdqrlgaisrrcdgNKAGPflGAGIACRpVVPDLNCTTLNAICKDDPQSIAHALQALVEECTRAAEHGFTPSELTMAK 472
                 57899**********************98766666663337777777...3457*****9999552..4444444444455555444444444477777777777777.....44555555555555.88888888866666666677777777766666666666666688888888888888***************************998 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.0098
                 EEEEEEESS-HH.HHHHHHHHHHCCSHHHH.......... CS
  PF05193.16  20 mvvvivGdvdhe.elvkliekyfgdlpaske........p 50 
                 +++ +vG ++ +  l+ l+e y+g+l+a            
  MMETSP1325-20131115|3228_1 847 FTFTFVGELPDDeVLLPLLETYLGSLGATPLppaaplapA 886
                 5788999999996899***********8765444444440 PP

  == domain 3    score: 30.8 bits;  conditional E-value: 2.7e-11
                  SCEEEEEEEEEECGGCGTTHHHHHHHHHHHCCC...HHHCHHHHHHTTTT-ESEEEEEEC--S....EEEEEEEEECESHHHHHHHHHHHHHHHHHHT.SSHHHHHHHHHH CS
  PF05193.16   78 eqahvalafpgppiesdpdsialkvlnelLggg...assrLftelreksglaysvsafldsys..dsglfgisatadpekvekavdvilnelrrlkengiteeeleraknq 183 
                   +a + la+++  + + +d  a ++l++ +      ++ rL + lr++   +y+vs ++  +s    g+  i+  +dpe++++++ ++++el+r+k++g+  ee+++ k  
  MMETSP1325-20131115|3228_1 1033 AKATCLLAWRVDMP-TATDPDADTTLEMRIKAMcvsLETRLLSVLRTENSQVYNVSVGWGRTSlnSFGMINIGYGCDPERTDEVESLLKAELERFKTDGPIVEEVDAVKSI 1142
                  55666667776666.4455555555555554446667888******************9988899******************************************9986 PP

>> PF00675.15  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.2     1e-22     7e-19       8     116 ..      90     228 ..      85     249 .. 0.91

  Alignments for each domain:
  == domain 1    score: 67.9 bits;  conditional E-value: 1e-22
                 TSSSEEEEEEEEE---TTSSTTT---HHHHHHHTTSHBTSSHHCHHHHHHHCT--EE....EEEE-SSEEEEEEEEEGGG..........................HHHHHHHHHHHHHHBTTSHHHHHHHHHHHHHHH CS
  PF00675.15   8 ppaktsavglvvdaGSryepkdnnGlAHflehmlfkgTkkypsnkleeeleklGgsl....naytsrentvYyvevlsdd..........................lekaldrladvllnplfsesevererkvvekev 116
                 +p++++ ++l+v +GS+ e++  +G+AHf+ehm fkgTk + + +l+++l++lG+++    na t++++tvY+++v+                             l  a+++l+++ +  ++s+++v+ er+v+++e 
  MMETSP1325-20131115|3228_1  90 KPSNSCELRLCVRVGSLCEEEHERGVAHFVEHMGFKGTKSFGHGELISYLSSLGMQYgsclNAHTNQDETVYKLSVPLPPrvpaatataiaadearvlaeeerkgrLSMAINVLNEWATGMRISDEDVQTERRVIQEEW 228
                 4889****************************************************9999***************98766677888999*****************************************888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.76u 0.38s 00:00:02.14 Elapsed: 00:00:01.26
# Mc/sec: 2531.39
//
Query:       MMETSP1325-20131115|3239_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   11.4  13.5       0.12   11.1   8.9    1.4  1  PF04111.7  Autophagy protein Apg6
        0.4   10.3   2.3       0.67    9.6   1.6    1.3  1  PF11671.3  Complementary sex determiner protein
        2.1    6.5  11.6        2.9    6.0   8.0    1.2  1  PF03961.8  Protein of unknown function (DUF342)
        3.1    7.0  17.8         45    3.2  12.3    2.2  1  PF13870.1  Domain of unknown function (DUF4201)
          4    6.8  17.4         12    5.3  12.0    1.7  1  PF04156.9  IncA protein
        8.4    5.0  21.7       0.48    9.1   3.8    2.1  2  PF14362.1  Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   8.9   5.1e-05      0.12      33     127 ..      21     114 ..      12     140 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5.1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  33 eldkelraaeeekdvYkqylekLesqnkeeenvealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklk 127
                 e + +l+a+++ +d + ++l+kL++++k+ + +  l +e+d L+ +++++ +e++ l +e ++ +++ ++ qee +  ++ + + ++   + ++ 
  MMETSP1325-20131115|3239_1  21 EKNAQLDAIKKQMDEHGAILKKLDDKKKD-SATPGLLKEKDALRAQKKEKQDEIQVLWDEFKEANKKWKKNQEEWKTYKAARDKAYEAERERRRA 114
                 55789**********************99.699****************************************9988888777766655555544 PP

>> PF11671.3  Complementary sex determiner protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.6   0.00029      0.67      10      64 ..      81     133 ..      76     151 .. 0.70

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00029
   PF11671.3  10 rereqksyknensyreyretsrersrdrkerersrekkiisslsnlsnnynynnn 64 
                 +e ++k  kn+++++ y+  +r+++ +  erer r ++  +  ++l  +  y+++
  MMETSP1325-20131115|3239_1  81 KEANKKWKKNQEEWKTYKA-ARDKAYEA-ERERRRAEQKAAREAELAAKTPYEEE 133
                 6889999*********975.56766655.77777766656666666666655554 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   8.0    0.0013       2.9     331     418 ..      14      98 ..       3     123 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0013
   PF03961.8 331 elkeklkeleeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeeleskkkeakikvnk 418
                 +++++++e + +l +++++++++ + lkkl++ k+++  ++   ++ + l+++k++ ++e++ l +e+ke +++ ++   ++++k+ k
  MMETSP1325-20131115|3239_1  14 DYQSQIAEKNAQLDAIKKQMDEHGAILKKLDD-KKKDSATPGLLKEKDALRAQKKEKQDEIQVLWDEFKEANKKWKKN--QEEWKTYK 98 
                 56777888888888888888888888******.666778999999999999999999999999999999888888877..33344333 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2  12.3      0.02        45      51     126 ..      12      92 ..       6     160 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.02
   PF13870.1  51 nqalnekieernkeLkkLkkkttktvhalthlkeklh.....fleeeleelkkelkekeeklaklrkelykvklerdklrk 126
                  + ++ +i+e+n++L ++kk+   +  +l+ l +k +      l +e  +l+ + kek+++++ l++e+ +++++ +k + 
  MMETSP1325-20131115|3239_1  12 AEDYQSQIAEKNAQLDAIKKQMDEHGAILKKLDDKKKdsatpGLLKEKDALRAQKKEKQDEIQVLWDEFKEANKKWKKNQE 92 
                 5678999*************************9999999999999999999999999999999999999999888665544 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  12.0    0.0052        12      82     188 ..      11     125 ..       2     134 .. 0.63

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0052
   PF04156.9  82 elsesesqlseleeeleqleerlaeleseledleedlellq............eelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqeklaelqrll 188
                 +  + +sq++e   +l+++ ++  e  + l++l + +++               ++k+++++++ l +++ke++k++++ +ee++  k++ +++  e+   +++++r+++k a++ +l 
  MMETSP1325-20131115|3239_1  11 SAEDYQSQIAEKNAQLDAIKKQMDEHGAILKKLDDKKKDSAtpgllkekdalrAQKKEKQDEIQVLWDEFKEANKKWKKNQEEWKTYKAA-RDKAYEA---ERERRRAEQKAAREAELA 125
                 34455666666666666666666666666666655555555666666666666****************************333333322.2222222...333555555555555554 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.8   0.00021      0.48     191     255 ..       5      68 ..       3      77 .. 0.85
   2 ?    0.2   9.1      0.11   2.5e+02     132     206 ..      61     124 ..      57     172 .. 0.50

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00021
   PF14362.1 191 ldaaqaeletlkaqldaaqaeleankrkaaleeeraakvaeeqaansandGllaRleAlgeltke 255
                  d++++  e++++q+++++a+l+a k++ ++  ++ +k+++++++ sa+ Gll++ +Al +  ke
  MMETSP1325-20131115|3239_1   5 IDDQRRSAEDYQSQIAEKNAQLDAIKKQMDEHGAILKKLDDKKKD-SATPGLLKEKDALRAQKKE 68 
                 57888999999************8899999999999999988776.99**********9887655 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.11
   PF14362.1 132 slsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaqaeletlkaqld 206
                 +l+a+++++++ei+ l  e +ea++++++++ee+++    +        +++y++ +e + a q   +++++++ 
  MMETSP1325-20131115|3239_1  61 ALRAQKKEKQDEIQVLWDEFKEANKKWKKNQEEWKTYKAAR--------DKAYEAERERRRAEQ---KAAREAEL 124
                 45666777777777777777777777777777776666643........333333333333333...22222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1885  (0.137873); expected 273.4 (0.02)
Passed bias filter:                      627  (0.0458602); expected 273.4 (0.02)
Passed Vit filter:                        95  (0.00694851); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.92u 0.34s 00:00:01.26 Elapsed: 00:00:00.51
# Mc/sec: 1155.89
//
Query:       MMETSP1325-20131115|3240_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 412.71
//
Query:       MMETSP1325-20131115|3238_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-08   32.2  15.0    5.6e-08   31.7  10.4    1.1  1  PF03176.10 MMPL family
    1.3e-07   30.0   6.6    2.4e-05   22.5   3.0    2.1  2  PF02460.13 Patched family
     0.0019   17.5   7.6     0.0029   16.9   5.3    1.3  1  PF12349.3  Sterol-sensing domain of SREBP cleavage-activation


Domain annotation for each model (and alignments):
>> PF03176.10  MMPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7  10.4   1.2e-11   5.6e-08     145     305 ..      83     241 ..      74     261 .. 0.81

  Alignments for each domain:
  == domain 1    score: 31.7 bits;  conditional E-value: 1.2e-11
  PF03176.10 145 lklievvtlvvilviLlivyrSlvaallplltvvvsllaalglvlilalllg.lelstfvlgllvvlliavGtDYallLvsRy...reelaagedreeaviravastgkvvtaaGltvaiamlgLvvarlpvlaqvGvaialGvlvdvlivlTllPAllvllGra 305
                 l+l  +++l v+l+ L+ +++++v+al+ ++++++ ++  lg     a+l++ l+++    + + v++i+ ++DY++ +   y   + e++a+ dre+ +  av ++g +v+a ++t a++ + L ++ l +++++++ i l++++++  ++ +  A l l+G  
  MMETSP1325-20131115|3238_1  83 LMLGMAIALPVALITLVFATGNVVIALYAIVSIGFVVASVLGA--CKAYLDWdLGIAE---SVAGVIVIGLAVDYTIHMGHMYdhaHHEIGAE-DREARFRFAVEKMGTTVFAGAVTTAGSGIFLYFTVLLFFGKMATLIVLTIFFSFVYSFGFFMAALLLAGPE 241
                 67889999**********************************9..4444443144444...557899**********9766553113344333.34456777****************************************************96666677765 PP

>> PF02460.13  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   3.0   5.3e-09   2.4e-05     664     759 ..      96     196 ..      79     212 .. 0.78
   2 !    8.1   0.1   0.00012      0.53     356     407 ..     214     269 ..     196     277 .. 0.67

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 5.3e-09
  PF02460.13 664 vcllfipnlitvlvitlsivSidiGvlGflslWgvdLD....pismitiimsiGFsvDlsaHiayhfvrsegde...takeRvadalealgwPvvqaalSTil 759
                 +   ++     v+++  +ivSi ++v  +l   ++ LD        ++ ++ iG +vD++ H  + + +++ +    + ++R + a+e++g  v+ +a+ T  
  MMETSP1325-20131115|3238_1  96 IT--LVFATGNVVIALYAIVSIGFVVASVLGACKAYLDwdlgIAESVAGVIVIGLAVDYTIHMGHMYDHAHHEIgaeDREARFRFAVEKMGTTVFAGAVTTAG 196
                 33..4445556889999*****************999954422345677899***************99999778889999******************9974 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00012
  PF02460.13 356 lytavavlfdfiYqitffaavlaiva.kaeaegrevllkr...iakeesaqriese 407
                 + + + ++f+f+Y   ff a+l +++ + e+ + + +l +   ++++e++++++s 
  MMETSP1325-20131115|3238_1 214 TLIVLTIFFSFVYSFGFFMAALLLAGpEGEFGRIKHILDVlgiAKESEADKHHASP 269
                 556799************99888876244554433333224733434444555554 PP

>> PF12349.3  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   5.3   6.3e-07    0.0029       5     135 ..     104     237 ..     100     250 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 6.3e-07
   PF12349.3   5 kvglalagvvivllsvasslgll.allglkltliileviPflvlavGvdnmfllvkavqrtskslsv...eeriaealgevgpsilltsltellafligaltdvpavqeFclfaavavlfdFllqitfFvavLsl 135
                 +v++al ++v++++ vas lg + a+l+ +l    + v+  +v++  vd +  + + ++  +++      e r   a +++g+ +++ ++t   + ++ ++t++      ++  ++ ++f+F++   fF+a L l
  MMETSP1325-20131115|3238_1 104 NVVIALYAIVSIGFVVASVLGACkAYLDWDLGIAES-VAGVIVIGLAVDYTIHMGHMYDHAHHEIGAedrEARFRFAVEKMGTTVFAGAVTTAGSGIFLYFTVLLFFGKMATLIVLTIFFSFVYSFGFFMAALLL 237
                 6899******************966899***99999.*************************99988666888889***************999877777889999999999999****************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       723  (0.0528818); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.41s 00:00:01.07 Elapsed: 00:00:00.51
# Mc/sec: 1306.25
//
Query:       MMETSP1325-20131115|3242_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 642.22
//
Query:       MMETSP1325-20131115|3243_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-16   58.5   0.8    3.5e-16   58.3   0.6    1.1  1  PF01423.17 LSM domain


Domain annotation for each model (and alignments):
>> PF01423.17  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.6   2.6e-20   3.5e-16       3      67 ..       5      71 ..       3      72 .. 0.94

  Alignments for each domain:
  == domain 1    score: 58.3 bits;  conditional E-value: 2.6e-20
                HHHHTTS-EEEEETTTEEEE-EEEEEETTCEEEEEEEEEEE...EEE....EE.EEEEEGGGEEEEE CS
  PF01423.17  3 lqelinkrVtvelkngreveGtLkafDkfmNlvLrdvtetwkrkkknk..relgqiliRGenivlvs 67
                l +l nk +tv +++gr ++G L+++D+ +Nl+L+d++e++ +++      +lg+++iRG+ni  ++
  MMETSP1325-20131115|3243_1  5 LDQLVNKVITVVTNDGRNIVGNLRGYDQTTNLILDDCHERVFSTTAGVqqDVLGLYIIRGDNIAIIG 71
                78899***********************************99999888999************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 407.89
//
Query:       MMETSP1325-20131115|3245_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0025   17.2   0.3     0.0036   16.7   0.2    1.2  1  PF01442.13 Apolipoprotein A1/A4/E domain
  ------ inclusion threshold ------
       0.04   13.5   0.6        2.9    7.5   0.1    2.3  2  PF11522.3  Yeast phosphatidylinositol-4-OH kinase Pik1
      0.042   13.3   0.1      0.049   13.1   0.0    1.3  1  PF06476.7  Protein of unknown function (DUF1090)


Domain annotation for each model (and alignments):
>> PF01442.13  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.2   7.9e-07    0.0036     110     168 ..      22      97 ..      15     101 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 7.9e-07
                 ----HHHHHH----------XXX.................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01442.13 110 rqnvealkerLaPyaeelrqkla.................erleelkesltpqaeelkaqlseqveelreklapya 168
                  ++++++ +rL +++  +r+++                   ++++ +e++ p   el+++++  +++++e+lap++
  MMETSP1325-20131115|3245_1  22 MAHLDSFSQRLRAMRSVVRTGVLkevvmscrdadletfhhVKMQNARENVMPVITELEKEMRAMAQDFSENLAPKM 97 
                 5788899999999999999988889999999999999988899999999999999999999999999999999986 PP

>> PF11522.3  Yeast phosphatidylinositol-4-OH kinase Pik1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.1   0.00064       2.9      25      40 ..      60      75 ..      44      77 .. 0.88
   2 ?    4.4   0.0    0.0059        27      28      40 ..      85      97 ..      76     106 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00064
   PF11522.3 25 eqkkkkkfrENvsPal 40
                 ++k++  rENv+P++
  MMETSP1325-20131115|3245_1 60 HHVKMQNARENVMPVI 75
                57899*********96 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0059
   PF11522.3 28 kkkkfrENvsPal 40
                 ++ f+EN++P +
  MMETSP1325-20131115|3245_1 85 MAQDFSENLAPKM 97
                4678*******76 PP

>> PF06476.7  Protein of unknown function (DUF1090)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.1e-05     0.049      52      92 ..      44      84 ..      15     100 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.1e-05
   PF06476.7 52 LkevkanCtdagllaereakveekeeevaerekeLkeakak 92
                Lkev   C da+l   ++ k+++++e+v    +eL++ +  
  MMETSP1325-20131115|3245_1 44 LKEVVMSCRDADLETFHHVKMQNARENVMPVITELEKEMRA 84
                89*********************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       686  (0.0501755); expected 273.4 (0.02)
Passed bias filter:                      611  (0.0446899); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|3244_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|3246_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-16   60.2   0.8    1.4e-16   60.1   0.6    1.0  1  PF03081.10 Exo70 exocyst complex subunit


Domain annotation for each model (and alignments):
>> PF03081.10  Exo70 exocyst complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1   0.6     1e-20   1.4e-16     282     371 .]      19     111 ..       2     111 .. 0.90

  Alignments for each domain:
  == domain 1    score: 60.1 bits;  conditional E-value: 1e-20
  PF03081.10 282 ssvgklsskekeqikekfkkFneaFeelyrkqkawkvpDpeLreeLrreikklvipaYrkflekygesdk...nkskyvkytpedlenlLnel 371
                 s +++l+ ++   +k++f+ Fn++F+el++  +a +vpD +Lr eLr++i+++++p  ++f+ ky+  ++   + ++y + +p  +e++L+el
  MMETSP1325-20131115|3246_1  19 SRKNELMLESGRVLKRRFESFNSEFDELHAAERALSVPDSTLRAELRKTISEKLVPPWSEFYYKYAVIQFskkHMDQYTRLSPTVVEDKLDEL 111
                 45667777888899********************************************************987779**************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|3247_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 1391.93
//
Query:       MMETSP1325-20131115|3248_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 257.72
//
Query:       MMETSP1325-20131115|3249_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-31  108.9   1.2    2.2e-31  108.7   0.9    1.0  1  PF02487.12 CLN3 protein
    0.00067   18.3   8.6    0.00093   17.9   5.9    1.3  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.081   12.5   2.4        1.6    8.4   0.1    2.2  2  PF11021.3  Protein of unknown function (DUF2613)


Domain annotation for each model (and alignments):
>> PF02487.12  CLN3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.7   0.9   4.7e-35   2.2e-31     239     405 ..       3     166 ..       1     170 [. 0.91

  Alignments for each domain:
  == domain 1    score: 108.7 bits;  conditional E-value: 4.7e-35
  PF02487.12 239 erlkllkpllfymvPLvtvylaeylinqgllelllfdishgfslslesqyrwyqvlyqlGvfisrsslklvrlrlqllyvLalLqlvnllfllldalysflpsilivfllilfeGllGGasyvntfkkihkkvepderefalsavsisdslGvvlaallalplenkl 405
                 ++l+ l +l    +PLv+vy+aey +  g+   + f+++   s+  e  y + +  yqlGvfisrss  l++  l++l++L++Lq+  l+f+++d++ +f  +  +     +  GllGG  yv  fk + + ++p  re a+s +s+s   G++l +l ++ +++++
  MMETSP1325-20131115|3249_1   3 QKLRFLGSLWRVTIPLVVVYFAEYALQSGVWSAIGFPVK--SSHARETFYEYANWSYQLGVFISRSSGMLFTPSLRVLWSLPVLQCALLAFFTVDSIAHFWYDYGLCAPA-VVVGLLGGGVYVHGFKLLSQATKPSLRELAMSSASVSADAGLMLGSLASIYIQQWI 166
                 667778888889**************************9..68889999999999****************************************998887766554433.335**************************************************998 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   5.9     2e-07   0.00093      66     146 ..      85     163 ..      18     168 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 2e-07
  PF07690.11  66 llglllfalglllllfa....sslwal...llvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllgglla 146
                  ++ll+f        f+    +++w +   l++  v+ Gl +g+++  g  l+++ ++++ r +a++ +s+++ +G +lg l++ ++ 
  MMETSP1325-20131115|3249_1  85 QCALLAF--------FTvdsiAHFW-YdygLCAPAVVVGLLGGGVYVHGFKLLSQATKPSLRELAMSSASVSADAGLMLGSLASIYIQ 163
                 2222222........3223345655.5666**************************************************99998875 PP

>> PF11021.3  Protein of unknown function (DUF2613)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1   0.00034       1.6      11      45 ..     110     143 ..     105     145 .. 0.82
   2 ?    4.4   0.4    0.0058        26       8      23 ..     144     159 ..     140     164 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00034
   PF11021.3  11 SaVvGlaLGavAvfGvtlvvqqdskpelqavdads 45 
                  +VvGl+ G+v v G  l+  q +kp+l++   +s
  MMETSP1325-20131115|3249_1 110 AVVVGLLGGGVYVHGFKLL-SQATKPSLRELAMSS 143
                 589****************.888999997665555 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0058
   PF11021.3   8 avASaVvGlaLGavAv 23 
                 a +Sa +Gl+LG  A 
  MMETSP1325-20131115|3249_1 144 ASVSADAGLMLGSLAS 159
                 7789********9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 850.95
//
Query:       MMETSP1325-20131115|3250_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.4    7.4   6.9        0.2   10.9   0.3    2.0  2  PF12366.3 Cancer susceptibility candidate 1


Domain annotation for each model (and alignments):
>> PF12366.3  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   1.5e-05       0.2      40     102 ..     114     176 ..      97     195 .. 0.69
   2 ?   -0.8   0.8     0.058     8e+02      80     103 ..     320     343 ..     311     354 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.5e-05
   PF12366.3  40 ivDiedsliseWllqkdiqneiiekleterveyeeaiskteeeakaargykt.dikkeykskpk 102
                 i  + d ++++  +++ +q e i ++ ++ +++ +a++   ++++aa g+ + + + e +++pk
  MMETSP1325-20131115|3250_1 114 ILNMTDAQVKQLPMEQQMQVEQIREMHKQQKQFAKAQRA-GAKKAAADGGGDgAGAAEGGAAPK 176
                 68899*********************************3.333333333333032333333332 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.058
   PF12366.3  80 eeeakaargyktdikkeykskpkk 103
                  ++ak++++++++ kk++++++ +
  MMETSP1325-20131115|3250_1 320 DKKAKGVKKKQSRVKKKDREDQLE 343
                 467888888888888887777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1135  (0.0830164); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.39s 00:00:01.10 Elapsed: 00:00:00.61
# Mc/sec: 1414.24
//
Query:       MMETSP1325-20131115|3254_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|3255_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-51  172.1   0.5    7.5e-51  172.0   0.4    1.0  1  PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain
    2.3e-20   73.1   0.4    2.8e-20   72.8   0.2    1.1  1  PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00441.19  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.0   0.4   1.1e-54   7.5e-51       3     150 .]       2     149 ..       1     149 [. 0.99

  Alignments for each domain:
  == domain 1    score: 172.0 bits;  conditional E-value: 1.1e-54
                 -...-HHHHHHHHHH--------HHHHHHHHHHHHHH-------GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTS-HHHHHHHHHHHHHHHHHHHHHHHHH---GGGBTTSSHHHHHHHHTTTTT-------HHHHHHHHHH CS
  PF00441.19   3 GfavametlnheRlliaaaalglarraleealeyakqrkafgkplidfqlireklaemaaeleaarllvyraaealdagkpdsaeaslaKllaselaqevadeamqllGgrGyaeeyplerlyrdarvlrigeGtseiqrniiarrll 150
                 Gf++am +++++R+ +aa+a+g+arra++eal+ +k+rk+ g+ +i +q+i ++la+ma+ +eaarll+y+ a  +d+g+p++  as+aK++a ++a++va +a+q++Gg+G+++eyp+e+l+rda++++++eGts+iqr+ii+r+l+
  MMETSP1325-20131115|3255_1   2 GFKIAMGAFDNTRPPVAAGAVGVARRAFDEALKDSKERKTMGTDIINHQSISFMLADMAMGIEAARLLTYKSAVEIDEGRPNTLYASMAKAFAGDHANKVAADAVQIFGGAGFNTEYPVEKLMRDAKIFQLYEGTSQIQRLIISRHLM 149
                 9************************************************************************************************************************************************986 PP

>> PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.2     4e-24   2.8e-20       3     133 ..      17     137 ..      16     138 .. 0.97

  Alignments for each domain:
  == domain 1    score: 72.8 bits;  conditional E-value: 4e-24
                 -HHHH---HHHHHHHHHHHHTT-B-S----B----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHTT---GGGBTT-HHHHHHHHHHH----TTT- CS
   PF08028.6   3 faavalGaargalaafierarervraaggaklaedpatqlrlAeaaaeldaAralleraaerlealadrgaevtpeeraearrdaalavelavaavdrlfeaaGgsalfkesplqRfwRDahaaaaHalld 133
                 +aa a+G+ar+a +++ +  +er++   g+ +  ++ + + lA++a+ ++aAr+l ++ a +    +d+g+++    +  a++++a+a + a +++ ++++ +Gg ++ +e+p++++ RDa++ + +++++
  MMETSP1325-20131115|3255_1  17 VAAGAVGVARRAFDEALKDSKERKT--MGTDIINHQSISFMLADMAMGIEAARLLTYKSAVE----IDEGRPN----TLYASMAKAFAGDHANKVAADAVQIFGGAGFNTEYPVEKLMRDAKIFQLYEGTS 137
                 6899*********************..***********************************....******8....9***********************************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 733.29
//
Query:       MMETSP1325-20131115|3253_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 230.42
//
Query:       MMETSP1325-20131115|3256_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.2e-17   63.2   0.2    2.4e-17   63.1   0.1    1.0  1  PF12774.2 Hydrolytic ATP binding site of dynein motor region D1
  ------ inclusion threshold ------
      0.045   13.3   0.2      0.076   12.6   0.1    1.4  1  PF10870.3 Protein of unknown function (DUF2729)


Domain annotation for each model (and alignments):
>> PF12774.2  Hydrolytic ATP binding site of dynein motor region D1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.1   3.5e-21   2.4e-17      76     140 ..       2      66 .]       1      66 [] 0.98

  Alignments for each domain:
  == domain 1    score: 63.1 bits;  conditional E-value: 3.5e-21
   PF12774.2  76 niykglaqtgawgcfdefnrisvevlsvvavqvksvqdairdkkkafnflgeeislipsvgifit 140
                 +i+kgl+q g wgcfdefnri vevlsv+a q+ +++ a ++   +f+f g  + l+ +  +fit
  MMETSP1325-20131115|3256_1   2 KIFKGLCQGGLWGCFDEFNRINVEVLSVIAQQILTINRAKQAGVPKFQFEGTYMQLNQNCNVFIT 66 
                 69*************************************************************98 PP

>> PF10870.3  Protein of unknown function (DUF2729)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.1e-05     0.076      35      46 ..      52      63 ..      45      66 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.1e-05
   PF10870.3 35 drYlqiNNNCNF 46
                + Y+q+N NCN 
  MMETSP1325-20131115|3256_1 52 GTYMQLNQNCNV 63
                68*********3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|3259_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.6    7.7   7.6        3.1    7.4   5.2    1.1  1  PF04612.7 Type II secretion system (T2SS), protein M
        3.5    7.9  10.0        4.8    7.5   7.0    1.3  1  PF04277.8 Oxaloacetate decarboxylase, gamma chain


Domain annotation for each model (and alignments):
>> PF04612.7  Type II secretion system (T2SS), protein M
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.2   0.00045       3.1      44      95 ..      28      78 ..      23      90 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00045
                XXXXXXXXXXXXXXXXX----------------------HHHHHHHHHHHCT CS
   PF04612.7 44 eeaqaelpklrqqlawleeqaaevralraaggsalsgaalaqlvtrsarrag 95
                ++++ el++++++ ++l++ aae++a+  a++++ ++aala++v++s ++++
  MMETSP1325-20131115|3259_1 28 AKSKGELDEEAALEEALRSSAAEAEAAA-ARAAEEEAAALAAAVAESSAEQH 78
                56788999*****************987.55666777899999999888775 PP

>> PF04277.8  Oxaloacetate decarboxylase, gamma chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   7.0    0.0007       4.8      40      78 ..      36      75 ..      16      76 .. 0.65

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0007
   PF04277.8 40 ekaekkaeeaakaesveekke.ddpelvAaItaAvaahra 78
                e+a+ +++ +++a+++e++ + + +e++Aa++aAva+ +a
  MMETSP1325-20131115|3259_1 36 EEAALEEALRSSAAEAEAAAArAAEEEAAALAAAVAESSA 75
                333333333333333333222599************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1186  (0.0867466); expected 273.4 (0.02)
Passed bias filter:                      636  (0.0465184); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|3257_1  [L=504]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-26   92.4  22.5    2.5e-26   92.4  15.6    2.0  2  PF00654.15 Voltage gated chloride channel


Domain annotation for each model (and alignments):
>> PF00654.15  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    1.5   0.5    0.0079   1.1e+02     159     189 ..       9      39 ..       2      92 .. 0.70
   2 !   92.4  15.6   1.8e-30   2.5e-26      35     352 ..     102     443 ..      88     444 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.0079
                 --GGGHHHHHH----------CCCHHHHHHH CS
  PF00654.15 159 lsllelilfvllGilgGllGalFvrlllkve 189
                 ++ +e  + +l+G l+Gl+G  F + + k  
  MMETSP1325-20131115|3257_1   9 FNAFEKGISILIGGLMGLVGLGFFNAFEKGF 39 
                 6777888899**********99887776544 PP

  == domain 2    score: 92.4 bits;  conditional E-value: 1.8e-30
                 -.-HHHHHHHHH------------------TTT-------HHHHHTT.---HHHHHHHH-------HHHHT-ST---TTTTTTTS-TT--.....TTHHHHH---HHHHHHHHHHSTT--S..-.T---............--GGGHHHHHH----------CCCHHHHHHHH...........HHHCH-CHHHH.........HHH-----------TTTSSCC..C-----TCHHHHC.....TS---........HHHHHH...HHHHHHHHHHHHHT-------HHHHHH-HHHHHHHHHHHHHHH-CTSST...HHCCC-----HHHH.CCS-CCHHHHHHHHCC-.-GCCHHHHHHHHHHHHHH CS
  PF00654.15  35 p.lslrtllvkvvalvlavgsGlslGreGplvqiGAavgsglsrllklsrndrrrrlvaaGaAAGlAaaFnaPlgGvlfalEelsrdlsl.....rallpvlvaslvaalvlrlllgsepa..fgevtalf.........alsllelilfvllGilgGllGalFvrlllkvek...........lfrklkklkvp.........krlepalvglltgllalllpansvlgggyallasll.....sgstl........llsllllllllvlkllataltlgsglpgGifvPsLviGAalGrlvglvlallfpgdassdpgayaliGaaaflag.vtrapltaivilfEltg.slelllplmlavaiAklv 352
                 + ++ + ++  +  ++l++++G+s+G e++l  +G+a+g++++++ +l   + r+   + G+A+++++ F +P+  v+++ E+  +  ++      +++   +a+++a +v+  +  +++   +                +++++++  ++++GilgG++G +    l  +++           +                    +l p ++g+l+g++a+ lp   +lg g  +l+ ++     s             + + +l+ +++ k++  a++lg g  gG ++P +++G ++ +++ ++++ +fp        ++a+ ++a ++ag ++ ap+ ++ i++ ++    e+  p++l+++i+ l+
  MMETSP1325-20131115|3257_1 102 KhVDPKEAPGILTISCLSLLFGFSVGPEAALGTMGGALGTLVAERRNLPVAE-RHAAALNGMAGAMGSLFPSPILSVILIHELSIQASKYpvnfmDSVVSGCIAATAAWMVFVGIQDYTFLdsM------NlplalydfsDFEMWYMGSAAFMGILGGVIGFIVLLALGLFRRiaqtnterlqnR---------FgerrgmtiaTILLPTVGGFLCGVIAWALPL--TLGDGTMQLKYVItkactS---GkrdnsddqCYDIDVLVATIFGKMATLAISLGFGCIGGQIFPCIYMGTITAMVLNIIAEDWFP-------ITLAVPCMAVCVAGsFVPAPFCMVGIAILVFVlGSEMTAPVFLSCIISFLT 443
                 347788888889999******************************9*99888.888**************************977777777555555555555555555555555333333441......222333445589999****************876666666665333333333332.........0233344564666*****************9..9*******99999655552...044567777*******************************************99999998877.......46666666666655257899988877777776689999*********9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       639  (0.0467379); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.95u 0.38s 00:00:01.33 Elapsed: 00:00:00.72
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|3263_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-18   65.5   0.0    4.5e-18   65.1   0.0    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
     0.0038   16.6   0.0     0.0049   16.2   0.0    1.2  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0   6.6e-22   4.5e-18       3     112 ..      65     169 ..      63     172 .. 0.84

  Alignments for each domain:
  == domain 1    score: 65.1 bits;  conditional E-value: 6.6e-22
                 ---------THHHHHHHHHHHTSHHHHHHHHTTHCCH....H-TTHHTTTHHHHHHHHHHHHH--HHH-SSS-.....--HHHHHHHHHHBGGGGGCTTS-HHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00443.24   3 vtGleNlGntCYmnsvlQcLvsipelrdyllryeervaeineeneleeeaqlaraladlfkklvenssekkav.....sPsefkktlkkineqfsgykQqDahEfllflLdqlhe 112
                 v+Gl+NlGntC++nsvlQ+L+s+ ++ +yl++ +           + ++  +a al  ++++l e +s ++ v      Ps ++ +++  ++qf+g +QqDa+E+l+ l+  l +
  MMETSP1325-20131115|3263_1  65 VRGLRNLGNTCFLNSVLQSLASLDSFCEYLEQLRP----------SPRSSPVAAALLICMRALRETTSATSGVaagvvDPSAIVGIVAGASRQFRGREQQDAQELLQALIGLLAD 169
                 79****************************99984..........457888889999888888444444444434445*******************************988766 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   7.2e-07    0.0049       2      57 ..      67     122 ..      66     165 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 7.2e-07
   PF13423.1   2 GlennlnncYlnaLLqllfftldlfeailkhs.ecskencllceLgflfnmLdsstk 57 
                 Gl n +n+c+ln++Lq+l  +ld f+  l+++   ++ +  +++L +  + L+++t 
  MMETSP1325-20131115|3263_1  67 GLRNLGNTCFLNSVLQSLA-SLDSFCEYLEQLrPSPRSSPVAAALLICMRALRETTS 122
                 99***************95.6667777777774446666777788888888885533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 781.03
//
Query:       MMETSP1325-20131115|3262_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-12   46.3   0.0    4.4e-12   45.8   0.0    1.2  1  PF00307.26 Calponin homology (CH) domain
  ------ inclusion threshold ------
      0.018   15.0   0.0      0.037   14.0   0.0    1.4  1  PF06395.6  CDC24 Calponin


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   6.4e-16   4.4e-12       6     107 ..     101     195 ..      96     197 .. 0.87

  Alignments for each domain:
  == domain 1    score: 45.8 bits;  conditional E-value: 6.4e-16
                 HHHHHHHTTSTCTSSHSHHHHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS..-HHHHHTST-HHHHHHHHHHHHHH CS
  PF00307.26   6 rWinkvlekleqsrqvenlskdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvl..tledllysgnkknvlaflaeLfrr 107
                  Wi+ +++++      + + ++l+DG+ L++ ++ ++p+   +++i  + +  +++++eN++ +l++++e +gv++    ++ dl++ ++  +v++++  L+++
  MMETSP1325-20131115|3262_1 101 AWIEGLTGEA----FSQGFGEQLKDGATLCKAVNVIKPG--SVKKI--NSSSLAFKQMENVTFFLKACRE-IGVPQSSlfETPDLYELKDLGLVVQCIYGLAKH 195
                 6888888777....567999*******************..67999..433479****************.9**999889*****99***********999876 PP

>> PF06395.6  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   5.4e-06     0.037      10      74 ..     119     180 ..     115     190 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.4e-06
   PF06395.6  10 lrqGspLlvlfNalkpeeklevdevssddakkcKksvykFleackkeLgfedeelftisdlfsdd 74 
                 l+ G+ L+   N++kp +  ++  +ss+ a k  ++v  Fl+ac +e+g+++ +lf   dl++ +
  MMETSP1325-20131115|3262_1 119 LKDGATLCKAVNVIKPGSVKKI--NSSSLAFKQMENVTFFLKAC-REIGVPQSSLFETPDLYELK 180
                 799**************99999..55555555556666688887.58*************99755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.69
# Mc/sec: 1093.99
//
Query:       MMETSP1325-20131115|3265_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.033   14.2   0.7      0.042   13.9   0.5    1.1  1  PF13154.1 Protein of unknown function (DUF3991)


Domain annotation for each model (and alignments):
>> PF13154.1  Protein of unknown function (DUF3991)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.5   3.1e-06     0.042      32      73 ..      12      54 ..       4      59 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.1e-06
   PF13154.1 32 vFpgkdeegkvvgaelrGtkkydkpfkgiakG.s.sglgfsfgs 73
                 Fp++ ++g+++ +e+ G+ k++++ kg+ +G + +g+ f f +
  MMETSP1325-20131115|3265_1 12 FFPSFWKDGEIRPYEKPGK-KKKGKGKGTGAGaGgGGASFKFSA 54
                599999*************.777777887777535888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 318.14
//
Query:       MMETSP1325-20131115|3268_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-10   40.4   0.0    1.4e-10   40.3   0.0    1.0  1  PF00995.18 Sec1 family


Domain annotation for each model (and alignments):
>> PF00995.18  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.0     1e-14   1.4e-10     294     361 ..      30      93 ..       7      97 .. 0.86

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 1e-14
                 -TTHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHHT.HHHHHHHHHHCC----------SSSHHHH CS
  PF00995.18 294 iadlkkfveklpelqkekanlslHvniaeelleviekrkldkvselEqdiatgsdkekqkkqaileli 361
                 +++l + v++lp+l ++k++l++H++i+e+l+ vi++r+l  ++e E   + g+ ++   +q +lel+
  MMETSP1325-20131115|3268_1  30 TSELLATVDSLPKLLERKKKLEVHTKILEALMAVIKARDLPTFFEAEDAAMGGNANK---PQ-LLELL 93 
                 89999******************************************9997776555...44.77665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|3270_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       417  (0.0305003); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 756.50
//
Query:       MMETSP1325-20131115|3269_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   14.2   5.1        0.9    9.4   0.8    2.6  2  PF00745.15 Glutamyl-tRNAGlu reductase, dimerisation domain
       0.11   10.8   6.5       0.13   10.5   4.5    1.0  1  PF13166.1  AAA domain
       0.12   12.2  20.0       0.11   12.4   5.1    3.0  2  PF02050.11 Flagellar FliJ protein
       0.25    8.5  13.6       0.32    8.1   9.5    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
       0.39   10.6  16.7        7.3    6.5   5.1    2.4  2  PF09304.5  Cortexillin I, coiled coil
        1.3    8.9   8.9         69    3.4   6.1    2.3  1  PF11214.3  Mediator complex subunit 2
        5.3    6.7  21.4        8.3    6.1   5.2    2.6  2  PF12718.2  Tropomyosin like
        6.8    4.2   7.1        8.3    3.9   4.9    1.1  1  PF01496.14 V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> PF00745.15  Glutamyl-tRNAGlu reductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1    0.0054       9.3      72      97 ..      82     106 ..      60     110 .. 0.81
   2 ?    9.4   0.8   0.00052       0.9      12      79 ..     118     185 ..     107     197 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0054
  PF00745.15  72 haptkalreaaadgdadellealrrl 97 
                  + t++lr+ a+dg+ d++l++++r+
  MMETSP1325-20131115|3269_1  82 TTLTQKLRNRASDGR-DDTLKLAKRV 106
                 678999999999999.9999999986 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00052
  PF00745.15  12 eefeewlkslevvplIralrekaeeireeelekalkklalgedpeevleklarsltnkllhaptkalr 79 
                 ++++  + +l++ ++ +   ++ ++ +e+ele+a+ kla+g++p +++e+  ++l  ++l    ++l 
  MMETSP1325-20131115|3269_1 118 RRMMGTVSELSMYQATAMKLQQEKAAKEQELEEAKWKLAHGQAPSDEAEREWYRLESQMLARHEQQLM 185
                 555555555555555555556678899***********************999999999987777765 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.5   7.7e-05      0.13     289     454 ..      13     176 ..       3     183 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 7.7e-05
   PF13166.1 289 leellekleskieklleelesilseekensefkedveelkaelealeeeleklekaleeKlkdpfs.slelesiadeieeinelvdkinelirkhNekidnlkeeknkakkklwlhlv..aelkedideyekklkklekkinslekeleklekeikklekeikelekel 454
                 l+ +l+     +ekl +ele+++     nse ++     +  l++l+ ++ +le++l+eK++++++ +l le++++ ++++ ++ ++  +   k  +++++++++  + + ++   +   + +++   ++++++++ e+++++++ +l+  ++  ++ e e  +le ++
  MMETSP1325-20131115|3269_1  13 LQGQLDVERARTEKLCKELEDPA-----NSERWRSLGGEDPDLDQLSAKVTVLESRLDEKKEQLLEkELVLEEVTTLTQKLRNRASDGRDDTLKLAKRVNEFQSRIRDTTRRMMGTVSelSMYQATAMKLQQEKAAKEQELEEAKWKLAHGQAPSDEAEREWYRLESQM 176
                 44444333444444444444444.....455666677777788889999999999999999999887888999999998888887777777766666666666666666666555433213344444478889999999999999999988888888888888888775 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   3.2     0.015        25      61     101 ..      50      90 ..       5      97 .. 0.89
   2 ?   12.4   5.1   6.3e-05      0.11      17      88 ..     102     168 ..      93     184 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.015
  PF02050.11  61 iaqqqqeleqaekqveqareewqeanqelkklekLeerekk 101
                 ++q   +++ +e ++++++e+++e+++ l+ + +L ++ ++
  MMETSP1325-20131115|3269_1  50 LDQLSAKVTVLESRLDEKKEQLLEKELVLEEVTTLTQKLRN 90 
                 57888999999999999999999999999999999988665 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 6.3e-05
  PF02050.11  17 aeekleelqqyreeyrqqlsgsmqglsaaelrnyqafisaldeaiaqqqqeleqaekqveqareewqeanqe 88 
                  +++++e q  +++   +++g+      +el  yqa + +l+++ a  +qele+a+ ++ + +    ea++e
  MMETSP1325-20131115|3269_1 102 LAKRVNEFQSRIRDTTRRMMGTV-----SELSMYQATAMKLQQEKAAKEQELEEAKWKLAHGQAPSDEAERE 168
                 57888999999999999999998.....********************************999877777776 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   9.5   0.00019      0.32     303     449 ..       5     157 ..       2     185 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00019
   PF12128.3 303 elkeasdelnqelsaanakleakeselea.leeqkkkf...edkdieklkadldqlpsirseleeveaeldaltekvqdvqekferrkqkikeqleeeleknkerleaireekerq..kaaieealealesqlrkqleaqkeelneeekeles 449
                 el+e++++l+++l   +a  e+  +ele  +++++++    ed d+++l+a+   l+s  +e +e+  e +++ e+v+ +++k+ +r +   ++  +  ++ +e +  ir++  r      + + ++a   +l++++ a+++el+e++ +l++
  MMETSP1325-20131115|3269_1   5 ELAEKAATLQGQLDVERARTEKLCKELEDpANSERWRSlggEDPDLDQLSAKVTVLESRLDEKKEQLLEKELVLEEVTTLTQKLRNRASDGRDDTLKLAKRVNEFQSRIRDTTRRMmgTVSELSMYQATAMKLQQEKAAKEQELEEAKWKLAH 157
                 7899***********************863666666543448*******************************************************99999999**********95555566789999999999999999999998888776 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   5.1    0.0042       7.3      13      78 ..       5      75 ..       2     103 .. 0.74
   2 ?    3.3   8.7     0.044        76      14     106 ..      53     152 ..      51     153 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0042
   PF09304.5 13 elankLagLersledekvsqeeLakqkde..Lksllasleaqkaerek...rlrelqakidellknlekek 78
                ela+k a+L+ +l+ e++  e+L k+ ++    ++ +sl +++ + ++   ++  l++++de + +l ++ 
  MMETSP1325-20131115|3269_1  5 ELAEKAATLQGQLDVERARTEKLCKELEDpaNSERWRSLGGEDPDLDQlsaKVTVLESRLDEKKEQLLEKE 75
                899***********************99876778999**99987766521144556666666655543332 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.044
   PF09304.5  14 lankLagLersledek..vsqeeL.....akqkdeLksllasleaqkaerekrlrelqakidellknlekeklakleLesrlskaekDkaileLkLaeak 106
                 l  k++ Le  l+++k  +  +eL         ++L+++    + +  +  kr++e+q++i ++ + +          ++  +k +++ka  e  L eak
  MMETSP1325-20131115|3269_1  53 LSAKVTVLESRLDEKKeqLLEKELvleevTTLTQKLRNRASDGRDDTLKLAKRVNEFQSRIRDTTRRMMGTVSELSMYQATAMKLQQEKAAKEQELEEAK 152
                 556777777777766522334555322213334448888888888888999**********9988777554333334799999*************9996 PP

>> PF11214.3  Mediator complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   6.1      0.04        69      46      99 ..      92     154 ..      24     168 .. 0.59

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.04
   PF11214.3  46 l......qksLkekikkFhs.iLDdlevklnda...ksyvdtlvelkkkqeekklkeEeEkkkk 99 
                        + +L++++++F+s i D++  ++ +    + y  t+++l+++ +++k++e eE+k k
  MMETSP1325-20131115|3269_1  92 AsdgrddTLKLAKRVNEFQSrIRDTTRRMMGTVselSMYQATAMKLQQE-KAAKEQELEEAKWK 154
                 0233333556777777777635555555544331003333444444444.44555555555544 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.2    0.0048       8.3      34     108 ..      47     132 ..      24     136 .. 0.85
   2 ?    5.0  11.8      0.01        17      10     124 ..      51     176 ..      49     185 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0048
   PF12718.2  34 EeeiksLqkKnqqlEeevekleeqlkeakekleekekkkteae...........altrriqlLEeeleesekrLketteklreadk 108
                 + ++ +L+ K+++lE+ +++ +eql e +  lee ++  ++             +l +r++  +  + ++ +r+  t+++l+  + 
  MMETSP1325-20131115|3269_1  47 DPDLDQLSAKVTVLESRLDEKKEQLLEKELVLEEVTTLTQKLRnrasdgrddtlKLAKRVNEFQSRIRDTTRRMMGTVSELSMYQA 132
                 668999*********************99999999888887777778899999999999999999999998888888888876655 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.01
   PF12718.2  10 enaqekaeeleeklKeleqenekkE...eeiksLqkKnqqlEe....evekleeqlkeakekleekekkkteae.......altrriqlLEeeleesekrLketteklreadkkaeeseRkvkaLEeer 124
                 +++ +k++ le++l e++++ ++kE   ee++ L++K+++  +    +  kl + ++e ++   +++ +             ++   + L++e    e++L+e+  kl++ +  ++e eR+  +LE++ 
  MMETSP1325-20131115|3269_1  51 DQLSAKVTVLESRLDEKKEQLLEKElvlEEVTTLTQKLRNRASdgrdDTLKLAKRVNEFQSRIRDTTRRM---MgtvselsMYQATAMKLQQEKAAKEQELEEAKWKLAHGQAPSDEAEREWYRLESQM 176
                 6677788888888888888888888555566666666555433011133345555555555555555443...02334466777778888888888888888888888888888888888888888765 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   4.9    0.0049       8.3      12     123 ..      31     149 ..      24     185 .. 0.54

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0049
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14  12 frDlnedvsafqrkfvnevrrldeverklrkleseikkakielk.dekekpdvpesk............evedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelr 123
                 ++D  ++++  +r+   e ++ld+++ k++ les ++++k +l  +e   ++v + +            + ++l+++++e ++++++ +       +el+  + ++  l++ek   e+    el+
  MMETSP1325-20131115|3269_1  31 LEDPANSER--WRSLGGEDPDLDQLSAKVTVLESRLDEKKEQLLeKELVLEEVTTLTqklrnrasdgrdDTLKLAKRVNEFQSRIRDTTRRMMGTVSELSMYQATAMKLQQEKAAKEQ----ELE 149
                 667777777..99999999999999999999999999888888842223333333332222222222234444444444444444443333333333333333333333333333333....222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1067  (0.0780427); expected 273.4 (0.02)
Passed bias filter:                      499  (0.036498); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.82u 0.39s 00:00:01.21 Elapsed: 00:00:00.62
# Mc/sec: 927.62
//
Query:       MMETSP1325-20131115|3272_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-09   37.3   0.0    2.6e-09   37.1   0.0    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
    1.1e-06   28.0   0.0    4.9e-06   25.9   0.0    2.1  2  PF00023.25 Ankyrin repeat
    1.2e-06   28.7   0.0    2.7e-05   24.4   0.0    2.0  2  PF13637.1  Ankyrin repeats (many copies)
    7.7e-05   22.6   0.0    0.00012   22.0   0.0    1.3  1  PF13857.1  Ankyrin repeats (many copies)
    0.00071   19.4   0.0      0.015   15.3   0.0    2.7  3  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.032   13.6   2.1        0.1   11.9   1.9    1.6  2  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   1.1e-12   2.6e-09       8      65 ..      23      85 ..      12     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 37.1 bits;  conditional E-value: 1.1e-12
   PF12796.2  8 gnlelvklLlekgadvdl.....getpLhlAaeagnleivklLleagadvnakdkegntpLhl 65
                 +l  +k ++++  d+ +     g+ pL++A e++ ++iv++Ll+agad++a d++gntp  l
  MMETSP1325-20131115|3272_1 23 ADLASIKSMISADPDLVYlrsedGRGPLFWAYEYEAFDIVQFLLDAGADPEAVDANGNTPVSL 85
                56666777777777777788877888**********************************887 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   2.2e-09   4.9e-06       1      32 [.      45      76 ..      45      77 .. 0.96
   2 ?   -1.6   0.0       1.1   2.6e+03       1       5 [.      78      82 ..      78      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 2.2e-09
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                dG+ PL +A ++   ++v++Ll++GAd+ a+d
  MMETSP1325-20131115|3272_1 45 DGRGPLFWAYEYEAFDIVQFLLDAGADPEAVD 76
                7999**************************98 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.1
                TSCBH CS
  PF00023.25  1 dGfTP 5 
                +G+TP
  MMETSP1325-20131115|3272_1 78 NGNTP 82
                79**9 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0051        12       2      40 ..      12      52 ..      11      53 .. 0.83
   2 !   24.4   0.0   1.2e-08   2.7e-05       1      38 [.      46      83 ..      46      85 .. 0.96

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0051
   PF13637.1  2 ltaLhyaai.sgrlelvklLlekgid.inrtdesGntaLhi 40
                +t+++++ i   +l  +k++++ ++d ++ + e+G+ +L  
  MMETSP1325-20131115|3272_1 12 HTTMMWQLIdRADLASIKSMISADPDlVYLRSEDGRGPLFW 52
                5677788887999*************777779999998876 PP

  == domain 2    score: 24.4 bits;  conditional E-value: 1.2e-08
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaL 38
                g+++L++a  +   ++v++Ll+ g+d+ ++d++Gnt++
  MMETSP1325-20131115|3272_1 46 GRGPLFWAYEYEAFDIVQFLLDAGADPEAVDANGNTPV 83
                5899********************************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   5.2e-08   0.00012       3      53 ..      33      83 ..      31      85 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 5.2e-08
   PF13857.1  3 ehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53
                +++p+ v  + e g+ pL +A ++ a ++v++Ll++gad+ + d++g+t++
  MMETSP1325-20131115|3272_1 33 SADPDLVYLRSEDGRGPLFWAYEYEAFDIVQFLLDAGADPEAVDANGNTPV 83
                6677888888899999**********************************8 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.38   8.8e+02       9      27 ..       6      24 ..       4      38 .. 0.76
   2 !   15.3   0.0   6.4e-06     0.015       1      29 [.      45      73 ..      45      74 .. 0.94
   3 ?   -1.1   0.0       1.3   2.9e+03       1       7 [.      78      84 ..      78      86 .. 0.78

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.38
   PF13606.1  9 Aasng.rielveaLlengad 27
                A+ n  ++ +++ L+++ ad
  MMETSP1325-20131115|3272_1  6 AWDNTeHTTMMWQLIDR-AD 24
                55564588899999987.44 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 6.4e-06
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +G+ pL++A ++   ++v++Ll++gad+ 
  MMETSP1325-20131115|3272_1 45 DGRGPLFWAYEYEAFDIVQFLLDAGADPE 73
                6999***********************86 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 1.3
   PF13606.1  1 nGnTpLh 7 
                nGnTp  
  MMETSP1325-20131115|3272_1 78 NGNTPVS 84
                89**975 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.2   2.8e+03      88     100 ..      39      51 ..      30      53 .. 0.79
   2 ?   11.9   1.9   4.6e-05       0.1      94     133 ..      78     111 ..      57     117 .] 0.66

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.2
                 EEEEEEE---EEE CS
  PF03066.10  88 VtfrLksGsGPVh 100
                 V +r + G GP++
  MMETSP1325-20131115|3272_1  39 VYLRSEDGRGPLF 51 
                 7788999999986 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 4.6e-05
                 E---EEEEE-EEE...........----XXXXXXXXXXXX CS
  PF03066.10  94 sGsGPVhisGqhlvaleedesldeeddeedeeeeddeedd 133
                 +G  PV ++G+    + e        +ee+ee+e +eedd
  MMETSP1325-20131115|3272_1  78 NGNTPVSLMGKDERPAAE------AAEEEEEEDEYEEEDD 111
                 577788888888544433......3444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 572.19
//
Query:       MMETSP1325-20131115|3274_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.62
# Mc/sec: 282.15
//
Query:       MMETSP1325-20131115|3275_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   13.4   0.0      0.028   13.0   0.0    1.1  1  PF05621.6 Bacterial TniB protein
      0.051   12.8   0.0      0.059   12.6   0.0    1.1  1  PF12187.3 Viral/Archaeal nuclease
      0.058   13.2   0.0      0.076   12.8   0.0    1.2  1  PF05823.7 Nematode fatty acid retinoid binding protein (Gp-FAR-1)
       0.25   10.9   2.9       0.43   10.1   0.0    2.1  2  PF08879.5 WRC


Domain annotation for each model (and alignments):
>> PF05621.6  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   8.1e-06     0.028       5      61 ..      47     103 ..      43     107 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 8.1e-06
   PF05621.6   5 pvidlshllpaaqglarlpaderiqrlradrwigypravealnrlealyawpnkqrm 61 
                  vi+l h +p  + + rl a +r+ rl  +  +   +a e+  r   l++  n++r 
  MMETSP1325-20131115|3275_1  47 HVIELFHHFPEVEDVMRLVATQRVTRLELNGEVALEKASESYTRQARLHSARNRHRR 103
                 69**********************************************999999885 PP

>> PF12187.3  Viral/Archaeal nuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.7e-05     0.059     110     167 ..      27      85 ..      13      97 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.7e-05
   PF12187.3 110 esiyailsikvevaekldvlG.rvifihyadredklklisalrilnlekqgkikkdefe 167
                 +++ a++  kv   ++l +     +f h+ + ed ++l+++ r+  le +g +  ++  
  MMETSP1325-20131115|3275_1  27 QPMSAVVEKKVCEYHILSAAHvIELFHHFPEVEDVMRLVATQRVTRLELNGEVALEKAS 85 
                 5677888888887777776664678***************************9888754 PP

>> PF05823.7  Nematode fatty acid retinoid binding protein (Gp-FAR-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.2e-05     0.076     101     148 ..      23      70 ..      18      76 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.2e-05
   PF05823.7 101 kpsleelkelakkiiaeYkaLseeakeelkkeFpivtkvlknekvqal 148
                  ++l+ +  +++k++ eY+ Ls++   el ++Fp+v  v++   +q++
  MMETSP1325-20131115|3275_1  23 TIKLQPMSAVVEKKVCEYHILSAAHVIELFHHFPEVEDVMRLVATQRV 70 
                 5677888899******************************97777765 PP

>> PF08879.5  WRC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00013      0.43      21      35 ..      31      45 ..      29      48 .. 0.84
   2 ?    0.6   0.5      0.12     4e+02      31      41 ..      95     105 ..      93     108 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00013
   PF08879.5 21 vlegkklCErHlhrg 35
                ++  kk CE+H++ +
  MMETSP1325-20131115|3275_1 31 AVVEKKVCEYHILSA 45
                7889*******9876 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.12
   PF08879.5  31 Hlhrgrsrsrk 41 
                 H +r+r+r+++
  MMETSP1325-20131115|3275_1  95 HSARNRHRRNT 105
                 89999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 502.31
//
Query:       MMETSP1325-20131115|3276_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-13   50.0   0.5    2.4e-13   49.3   0.3    1.3  1  PF04117.7 Mpv17 / PMP22 family
  ------ inclusion threshold ------
      0.029   14.1   0.0      0.038   13.6   0.0    1.2  1  PF10547.4 P22_AR N-terminal domain


Domain annotation for each model (and alignments):
>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.3   3.6e-17   2.4e-13      10      67 ..      56     113 ..      49     114 .. 0.92

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 3.6e-17
   PF04117.7  10 eeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvnlvslgWntyLSlikn 67 
                 ++  +k + + +++ +a w  Wpav + nF f P+++r+++v +vs++W + LS++++
  MMETSP1325-20131115|3276_1  56 ADGLRKYRGECFDVCTAYWQMWPAVHAMNFMFTPVELRIPVVTSVSFVWLVVLSFMSH 113
                 566778888999*******************************************998 PP

>> PF10547.4  P22_AR N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   5.6e-06     0.038      66     114 ..      31      77 ..       4      83 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5.6e-06
   PF10547.4  66 remlclpleklngwLftinpekvrpelrdklikyqeEcddvLydywtkg 114
                   ml lpl +  +w  ++  +     l d l ky+ Ec+dv   yw+  
  MMETSP1325-20131115|3276_1  31 VPMLYLPLYY--AWEHAVLHDVSLNGLADGLRKYRGECFDVCTAYWQMW 77 
                 4455555554..5777776666677899******************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 682.44
//
Query:       MMETSP1325-20131115|3266_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-16   59.9   0.0    2.7e-16   59.0   0.0    1.5  1  PF00085.15 Thioredoxin
    2.3e-05   24.1   0.0     0.0027   17.4   0.0    2.4  2  PF13848.1  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.014   15.4   0.3      0.038   14.0   0.0    1.9  2  PF13098.1  Thioredoxin-like domain
      0.021   14.4   3.8      0.038   13.6   2.6    1.3  1  PF12325.3  TATA element modulatory factor 1 TATA binding
      0.099   12.6   2.7       0.14   12.1   1.9    1.3  1  PF13118.1  Protein of unknown function (DUF3972)


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   0.0   9.8e-20   2.7e-16       4     101 ..      36     138 ..      33     141 .. 0.94

  Alignments for each domain:
  == domain 1    score: 59.0 bits;  conditional E-value: 9.8e-20
                 ESSHHHHHHHHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-..TSEEEEEETT..TTHHHHHHTT--SSSEEEEESSSSEEE.EE---.-HHHHHHHH CS
  PF00085.15   4 vltkenfeeevaksdklvlvefyApwCGhCkalaPeyeklaeelke..kvvlakvdvd..enkdlaseygvegiPtlklfkngkkve.evegarekeklvafl 101
                 +lt enf++ev +s k  +++f Ap     ++ +  ++kla+e+++  +v +a vd++  +nkdl+s+ygv+g+Pt+klf++g++    +eg+r+ ++l+++ 
  MMETSP1325-20131115|3266_1  36 SLTPENFDAEVFDSGKSAFIKFLAPLVRALQEDEADWDKLAKEYDGseTVLIADVDCTegDNKDLCSKYGVRGYPTIKLFNEGDTEGePYEGGRDLKSLKKAA 138
                 7899*****************************************999**********5558**********************99879********999876 PP

>> PF13848.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0023       6.3      81     136 ..      36      91 ..      34      97 .. 0.84
   2 !   17.4   0.0   9.9e-07    0.0027      22      69 ..      89     136 ..      86     140 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0023
                 XXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF13848.1  81 eltpenae.elfesglppllllflnkdseeteklknriekvakkfkgkinfatvdad 136
                  ltpen++ e+f sg+  +++ fl     + ++ ++   k+ak+++g+ +++++d+d
  MMETSP1325-20131115|3266_1  36 SLTPENFDaEVFDSGKS-AFIKFLAPLVRALQEDEADWDKLAKEYDGSETVLIADVD 91 
                 6899999648*****77.8888888899999***************99888888877 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 9.9e-07
                 --B------HHHHHHTT---.--EEEEETTTTEEEEE-HHT--HHHHHH CS
   PF13848.1  22 dvtfgvtsekevakklgike.pkvllfrkfdekrvkydgekltvddlkk 69 
                 dv++   ++k++++k+g++  p+++lf+ +d++ ++y+g   + ++lkk
  MMETSP1325-20131115|3266_1  89 DVDCTEGDNKDLCSKYGVRGyPTIKLFNEGDTEGEPYEGG-RDLKSLKK 136
                 77788889*******************************8.89999997 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.4e-05     0.038      69     103 ..      95     129 ..      40     138 .. 0.65
   2 ?   -1.3   0.2      0.79   2.2e+03      21      21 ..     188     188 ..     144     232 .. 0.61

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.4e-05
   PF13098.1  69 leekelgrklgvrgtPtivfldgeGklvarlpGyl 103
                  ++k+l  k+gvrg Pti ++++  ++   ++G  
  MMETSP1325-20131115|3266_1  95 GDNKDLCSKYGVRGYPTIKLFNEGDTEGEPYEGGR 129
                 25669****************96545555566655 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.79
   PF13098.1  21 k 21 
                 k
  MMETSP1325-20131115|3266_1 188 K 188
                 2 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.6   1.4e-05     0.038      47     111 ..     157     224 ..     146     230 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.4e-05
   PF12325.3  47 rdeareEivkltee..neelkekkkeleelekele.eleqryettLellGEksEeveELraDveDLKe 111
                  + a +E+ klt e  + ++k+ ++++e+lek+++ +le  + t  +l+ Ek+  ve L++ ++ LK+
  MMETSP1325-20131115|3266_1 157 EKAAIDELKKLTPEerLSQIKAAEDSIEALEKKFKeDLEGLQATYKKLMDEKDSAVEALKKPLKGLKA 224
                 45566888888855225788999**********9626899999999********************97 PP

>> PF13118.1  Protein of unknown function (DUF3972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.9   5.2e-05      0.14      41      98 ..     166     223 ..     156     235 .] 0.73

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.2e-05
   PF13118.1  41 alvkkaekelia.adesstlleesfvektigtilnlhekvldakdETiealknenkfLK 98 
                 +l +++  ++i+ a+ s ++le++f e  ++ +   ++k++d kd  +ealk+  k LK
  MMETSP1325-20131115|3266_1 166 KLTPEERLSQIKaAEDSIEALEKKFKE-DLEGLQATYKKLMDEKDSAVEALKKPLKGLK 223
                 555555555555055555666666666.5699********************9877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       935  (0.0683879); expected 273.4 (0.02)
Passed bias filter:                      666  (0.0487127); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.38s 00:00:01.02 Elapsed: 00:00:00.48
# Mc/sec: 1173.22
//
Query:       MMETSP1325-20131115|3278_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|3271_1  [L=640]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (640 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       826  (0.0604154); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.04u 0.38s 00:00:01.42 Elapsed: 00:00:00.73
# Mc/sec: 2100.92
//
Query:       MMETSP1325-20131115|3279_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:01.33
# Mc/sec: 126.12
//
Query:       MMETSP1325-20131115|3277_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.5   1.3      0.014   15.5   0.9    2.0  3  PF12355.3 Down syndrome cell adhesion molecule C terminal


Domain annotation for each model (and alignments):
>> PF12355.3  Down syndrome cell adhesion molecule C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.45   6.1e+03      64      71 ..      28      35 ..      19      50 .. 0.57
   2 ?   -8.5   3.0         1   1.4e+04      64      69 ..      75      79 ..      73      82 .. 0.39
   3 ?   15.5   0.9     1e-06     0.014      25      78 ..     130     182 ..     105     205 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 0.45
   PF12355.3 64 eppppppr 71
                  pppp  
  MMETSP1325-20131115|3277_1 28 TTPPPPVA 35
                34444444 PP

  == domain 2    score: -8.5 bits;  conditional E-value: 1
   PF12355.3 64 eppppp 69
                 pp  p
  MMETSP1325-20131115|3277_1 75 PPPF-P 79
                2333.3 PP

  == domain 3    score: 15.5 bits;  conditional E-value: 1e-06
   PF12355.3  25 qygsqyggqygapydhygsrgsvgrrsvgsarnpvs.gspepppppprnhdqsns 78 
                 + g +y  ++ + y h   +   grr  gsa   +s  +  ppppppr+h  +  
  MMETSP1325-20131115|3277_1 130 KGGNDYQHKHLKRYAHSAGKKKEGRR--GSATGMTSySAAVPPPPPPRQHVNAAV 182
                 5578899999999****9999****9..78888555155679999****976655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1488.51
//
Query:       MMETSP1325-20131115|3281_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   21.6   8.4        7.5    6.8   0.0    5.8  6  PF13516.1  Leucine Rich repeat
    0.00022   20.6   1.1         73    3.8   0.0    5.4  5  PF00560.28 Leucine Rich Repeat
     0.0036   17.1   7.2         18    5.9   0.0    5.8  6  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.013   15.0   4.3        1.4    8.4   0.0    4.0  5  PF12799.2  Leucine Rich repeats (2 copies)
      0.076   12.6   6.1         12    5.6   0.3    4.2  4  PF13855.1  Leucine rich repeat
       0.11   12.3   0.1       0.45   10.3   0.0    2.1  2  PF13996.1  YobH-like protein


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.019        42       2      15 ..      16      29 ..      15      31 .. 0.89
   2 ?    1.0   0.0      0.24   5.5e+02       1      10 [.      43      52 ..      43      64 .. 0.86
   3 ?    2.3   0.0     0.091   2.1e+02       2      23 ..      82     103 ..      81     104 .. 0.86
   4 !    6.1   0.0    0.0054        12       3      22 ..     111     130 ..     109     135 .. 0.79
   5 !    6.8   0.0    0.0033       7.5       4      24 .]     143     163 ..     140     163 .. 0.87
   6 ?   -0.8   0.0      0.92   2.1e+03       4      11 ..     173     180 ..     171     185 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.019
   PF13516.1  2 knLtsLdLsnNqig 15
                ++L  L++s+Nq++
  MMETSP1325-20131115|3281_1 16 QSLHRLNMSMNQVT 29
                6899********87 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.24
   PF13516.1  1 lknLtsLdLs 10
                l++Lt+L L+
  MMETSP1325-20131115|3281_1 43 LPQLTTLELG 52
                799****997 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.091
   PF13516.1   2 knLtsLdLsnNqigdeGlsaLa 23 
                 ++L+ L +  N+i++e l  ++
  MMETSP1325-20131115|3281_1  82 SSLRFLSIHTNGITSEQLVTIS 103
                 6899999999*****9888775 PP

  == domain 4    score: 6.1 bits;  conditional E-value: 0.0054
   PF13516.1   3 nLtsLdLsnNqigdeGlsaL 22 
                  L++L+L++N +g  G+ +L
  MMETSP1325-20131115|3281_1 111 ALEDLNLGGNIFGHGGVHGL 130
                 59********9998887544 PP

  == domain 5    score: 6.8 bits;  conditional E-value: 0.0033
   PF13516.1   4 LtsLdLsnNqigdeGlsaLan 24 
                 Lt L+Ls N ++ + + a+a+
  MMETSP1325-20131115|3281_1 143 LTGLNLSCNYLHTQHVLAFAQ 163
                 888**********99999886 PP

  == domain 6    score: -0.8 bits;  conditional E-value: 0.92
   PF13516.1   4 LtsLdLsn 11 
                 L+ LdLs+
  MMETSP1325-20131115|3281_1 173 LRILDLSS 180
                 889***96 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.041        94       1      13 [.      17      29 ..      17      51 .. 0.78
   2 ?    1.9   0.0      0.14   3.1e+02       1      15 [.      83     102 ..      83     108 .. 0.77
   3 ?    2.4   0.0     0.099   2.2e+02       2      12 ..     112     122 ..     111     133 .. 0.83
   4 ?    3.8   0.0     0.032        73       2      13 ..     143     154 ..     142     165 .. 0.83
   5 ?    2.4   0.0     0.094   2.1e+02       2      11 ..     173     182 ..     172     196 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.041
                TESEEEETSSBCB CS
  PF00560.28  1 nLeeLdLsgNnlt 13
                +L +L++s N++t
  MMETSP1325-20131115|3281_1 17 SLHRLNMSMNQVT 29
                699*******998 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.14
                 TESEEEETSSBCBC.....H CS
  PF00560.28   1 nLeeLdLsgNnlts.....l 15 
                 +L+ L++  N +ts     +
  MMETSP1325-20131115|3281_1  83 SLRFLSIHTNGITSeqlvtI 102
                 69**********96465444 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.099
                 ESEEEETSSBC CS
  PF00560.28   2 LeeLdLsgNnl 12 
                 Le L+L gN +
  MMETSP1325-20131115|3281_1 112 LEDLNLGGNIF 122
                 899******65 PP

  == domain 4    score: 3.8 bits;  conditional E-value: 0.032
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                 L+ L+Ls+N l 
  MMETSP1325-20131115|3281_1 143 LTGLNLSCNYLH 154
                 788******986 PP

  == domain 5    score: 2.4 bits;  conditional E-value: 0.094
                 ESEEEETSSB CS
  PF00560.28   2 LeeLdLsgNn 11 
                 L++LdLs+ +
  MMETSP1325-20131115|3281_1 173 LRILDLSSSC 182
                 99*****865 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0         1   2.3e+03       2      14 ..      17      29 ..      16      32 .. 0.83
   2 ?    0.6   0.0      0.47   1.1e+03       1      10 [.      44      53 ..      44      63 .. 0.74
   3 !    5.9   0.0    0.0081        18       1      15 [.      82      96 ..      82     101 .. 0.89
   4 ?    2.6   0.0       0.1   2.4e+02       2      11 ..     111     120 ..     110     134 .. 0.73
   5 ?    4.6   0.2     0.022        51       2      15 ..     142     155 ..     141     159 .. 0.87
   6 ?    0.4   0.0      0.54   1.2e+03       3      11 ..     173     181 ..     172     187 .. 0.81

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 1
   PF13504.1  2 nLkeLdLsgnrLt 14
                +L +L+ s n+ t
  MMETSP1325-20131115|3281_1 17 SLHRLNMSMNQVT 29
                7999999999865 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.47
   PF13504.1  1 pnLkeLdLsg 10
                p+L++L L g
  MMETSP1325-20131115|3281_1 44 PQLTTLELGG 53
                689***9944 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.0081
   PF13504.1  1 pnLkeLdLsgnrLts 15
                ++L++L+++ n++ts
  MMETSP1325-20131115|3281_1 82 SSLRFLSIHTNGITS 96
                58**********995 PP

  == domain 4    score: 2.6 bits;  conditional E-value: 0.1
   PF13504.1   2 nLkeLdLsgn 11 
                  L++L+L gn
  MMETSP1325-20131115|3281_1 111 ALEDLNLGGN 120
                 69*****999 PP

  == domain 5    score: 4.6 bits;  conditional E-value: 0.022
   PF13504.1   2 nLkeLdLsgnrLts 15 
                  L+ L+Ls+n+L++
  MMETSP1325-20131115|3281_1 142 ALTGLNLSCNYLHT 155
                 5899*******985 PP

  == domain 6    score: 0.4 bits;  conditional E-value: 0.54
   PF13504.1   3 LkeLdLsgn 11 
                 L+ LdLs+ 
  MMETSP1325-20131115|3281_1 173 LRILDLSSS 181
                 899***874 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.085   1.9e+02      20      37 ..      12      29 ..       8      46 .. 0.83
   2 ?    4.4   0.0     0.012        26       2      33 ..      17      53 ..      16      54 .. 0.69
   3 ?    8.4   0.0   0.00062       1.4       2      34 ..      83     120 ..      82     135 .. 0.85
   4 ?    3.7   0.2     0.019        44       3      36 ..     112     153 ..     110     160 .. 0.75
   5 ?   -1.5   0.0      0.84   1.9e+03       3      10 ..     173     180 ..     173     184 .. 0.64

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.085
   PF12799.2 20 lanLpnLktLnLsnNpis 37
                l++ ++L  Ln+s N+++
  MMETSP1325-20131115|3281_1 12 LSGHQSLHRLNMSMNQVT 29
                677789999999999976 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.012
   PF12799.2  2 nLevLdLsnNnIk.....dlppelanLpnLktLnLsn 33
                +L+ L+ s N+++      l+  +  Lp+L+tL L +
  MMETSP1325-20131115|3281_1 17 SLHRLNMSMNQVTlamgaRLGRIVRDLPQLTTLELGG 53
                6788888888887633333555457799999999975 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.00062
   PF12799.2   2 nLevLdLsnNnIkd.....lppelanLpnLktLnLsnN 34 
                 +L++L++  N I++     ++  l+  + L+ LnL +N
  MMETSP1325-20131115|3281_1  83 SLRFLSIHTNGITSeqlvtISTALKAASALEDLNLGGN 120
                 79**********97776666655888889*******99 PP

  == domain 4    score: 3.7 bits;  conditional E-value: 0.019
   PF12799.2   3 LevLdLsnN........nIkdlppelanLpnLktLnLsnNpi 36 
                 Le L+L +N         ++ l + +   + L+ LnLs N +
  MMETSP1325-20131115|3281_1 112 LEDLNLGGNifghggvhGLTALAEMVTASKALTGLNLSCNYL 153
                 788888888888776666777776667778888899988876 PP

  == domain 5    score: -1.5 bits;  conditional E-value: 0.84
   PF12799.2   3 LevLdLsn 10 
                 L+ LdLs+
  MMETSP1325-20131115|3281_1 173 LRILDLSS 180
                 56666665 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1      0.02        46      20      56 ..      11      51 ..       4      53 .. 0.66
   2 ?    3.2   0.1     0.028        64      13      35 ..      99     120 ..      82     136 .. 0.70
   3 ?    5.6   0.3    0.0053        12      24      44 ..     140     160 ..     110     163 .. 0.80
   4 ?   -1.2   0.0      0.67   1.5e+03      27      34 ..     173     180 ..     170     189 .. 0.59

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.02
   PF13855.1 20 aFkglsnLkvLdLsgnnlksispea.....fkgLpsLreLnL 56
                a++g ++L+ L+ s n  +   ++a       +Lp+L+ L L
  MMETSP1325-20131115|3281_1 11 ALSGHQSLHRLNMSMNQVTLA-MGArlgriVRDLPQLTTLEL 51
                667778888888888887644.33333445778888887776 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.028
   PF13855.1  13 lkvipdgaFkglsnLkvLdLsgn 35 
                 l +i+ +a+k  s L+ L+L+gn
  MMETSP1325-20131115|3281_1  99 LVTIS-TALKAASALEDLNLGGN 120
                 44444.47777777777777754 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.0053
   PF13855.1  24 lsnLkvLdLsgnnlksispea 44 
                  + L+ L+Ls+n l++ +  a
  MMETSP1325-20131115|3281_1 140 SKALTGLNLSCNYLHTQHVLA 160
                 4789999***99999877555 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 0.67
   PF13855.1  27 LkvLdLsg 34 
                 L+ LdLs+
  MMETSP1325-20131115|3281_1 173 LRILDLSS 180
                 44455553 PP

>> PF13996.1  YobH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0    0.0002      0.45      26      49 ..     137     160 ..     130     173 .. 0.78
   2 ?   -1.8   0.0       1.2   2.8e+03      27      45 ..     248     268 ..     246     271 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0002
   PF13996.1  26 vgSeknaaglgLqCkYltarglvt 49 
                 v  +k ++gl L C+Yl ++ +  
  MMETSP1325-20131115|3281_1 137 VTASKALTGLNLSCNYLHTQHVLA 160
                 5678899**********9998764 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.2
   PF13996.1  27 gSeknaaglg..LqCkYltar 45 
                 +S   +aglg  L+Ck ++ r
  MMETSP1325-20131115|3281_1 248 HSMALLAGLGgpLECKLFSIR 268
                 577778888877999877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1266.00
//
Query:       MMETSP1325-20131115|3280_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-11   43.5   0.0    2.9e-05   23.8   0.0    3.3  3  PF13041.1  PPR repeat family
    3.5e-10   39.2   0.5    0.00057   19.8   0.0    4.0  4  PF13812.1  Pentatricopeptide repeat domain
    1.8e-08   33.7   0.2     0.0018   18.0   0.0    3.4  3  PF01535.15 PPR repeat
    0.00087   18.5   0.1       0.63    9.4   0.0    3.5  3  PF12854.2  PPR repeat


Domain annotation for each model (and alignments):
>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0036        12       1      21 [.      49      69 ..      49      72 .. 0.89
   2 !   23.8   0.0   8.6e-09   2.9e-05      21      48 ..     140     169 ..     137     171 .. 0.90
   3 !   10.1   0.0   0.00016      0.54      17      38 ..     173     194 ..     170     195 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0036
   PF13041.1  1 pnvvtYNtlIsglckkgkvee 21
                pn v YN  I+++ +++++e+
  MMETSP1325-20131115|3280_1 49 PNHVHYNNAIKACGRARQWEA 69
                79999***********99987 PP

  == domain 2    score: 23.8 bits;  conditional E-value: 8.6e-09
   PF13041.1  21 eAfklfneMk..krgikPnvyTYsilikgl 48 
                 eA++lf++M   +r i+P+++T+  li+++
  MMETSP1325-20131115|3280_1 140 EALRLFEDMTssRRAITPDSFTFAALIDAC 169
                 8*********666789*************8 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 0.00016
   PF13041.1  17 gkveeAfklfneMkkrgikPnv 38 
                 g+  +A+++f+ M + g+ Pn+
  MMETSP1325-20131115|3280_1 173 GQTVKALEIFHSMADYGVHPNE 194
                 78889****************7 PP

>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0     4e-05      0.14       2      21 ..      52      71 ..      51      72 .. 0.93
   2 ?    2.6   0.0     0.055   1.9e+02      19      31 ..     140     152 ..     105     157 .. 0.85
   3 !   19.8   0.0   1.7e-07   0.00057       2      34 .]     160     192 ..     159     192 .. 0.97
   4 ?   -2.1   0.0       1.7   5.8e+03      17      33 ..     241     257 ..     230     258 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4e-05
   PF13812.1  2 etyntlitalaksgrpeaAl 21
                ++yn  i+a+ ++ ++ea++
  MMETSP1325-20131115|3280_1 52 VHYNNAIKACGRARQWEAVC 71
                79****************98 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.055
   PF13812.1  19 aAlalleeMeqqg 31 
                 +Al+l+e+M++++
  MMETSP1325-20131115|3280_1 140 EALRLFEDMTSSR 152
                 599******9865 PP

  == domain 3    score: 19.8 bits;  conditional E-value: 1.7e-07
   PF13812.1   2 etyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 +t+++li+a+  sg+  +Al++++ M ++gv P
  MMETSP1325-20131115|3280_1 160 FTFAALIDACRYSGQTVKALEIFHSMADYGVHP 192
                 79*****************************98 PP

  == domain 4    score: -2.1 bits;  conditional E-value: 1.7
   PF13812.1  17 peaAlalleeMeqqgvk 33 
                  e+A++++ +  + +v+
  MMETSP1325-20131115|3280_1 241 DEEARQAVQRICSINVE 257
                 56799999998888876 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0   0.00081       2.8       1      19 [.      52      70 ..      52      72 .. 0.89
   2 ?    4.0   0.0     0.015        52      18      29 ..     140     151 ..     138     152 .. 0.87
   3 !   18.0   0.0   5.3e-07    0.0018       1      31 []     160     190 ..     160     190 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00081
  PF01535.15  1 vtynslIsgyckaGkleeA 19
                v yn  I+++++a+++e +
  MMETSP1325-20131115|3280_1 52 VHYNNAIKACGRARQWEAV 70
                78**************976 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.015
  PF01535.15  18 eAlelfkeMkek 29 
                 eAl+lf++M ++
  MMETSP1325-20131115|3280_1 140 EALRLFEDMTSS 151
                 9********875 PP

  == domain 3    score: 18.0 bits;  conditional E-value: 5.3e-07
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkekGv 31 
                 +t+ +lI+++  +G+  +Ale+f+ M + Gv
  MMETSP1325-20131115|3280_1 160 FTFAALIDACRYSGQTVKALEIFHSMADYGV 190
                 58899*********************99886 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.046   1.6e+02       4      17 ..      48      61 ..      47      66 .. 0.81
   2 ?    2.8   0.1     0.021        72      25      33 ..     140     148 ..     139     149 .. 0.92
   3 !    9.4   0.0   0.00018      0.63       3      33 ..     155     185 ..     153     186 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.046
   PF12854.2  4 kPdvvTYNtLIdGl 17
                +P+ v YN  I++ 
  MMETSP1325-20131115|3280_1 48 RPNHVHYNNAIKAC 61
                6*******888775 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.021
   PF12854.2  25 eAvelldeM 33 
                 eA++l+++M
  MMETSP1325-20131115|3280_1 140 EALRLFEDM 148
                 8******** PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.00018
   PF12854.2   3 lkPdvvTYNtLIdGlCraGrvdeAvelldeM 33 
                 + Pd +T+  LId+   +G   +A+e++  M
  MMETSP1325-20131115|3280_1 155 ITPDSFTFAALIDACRYSGQTVKALEIFHSM 185
                 78***********988888888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.34s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1376.82
//
Query:       MMETSP1325-20131115|3284_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.11   11.9   0.0    1.0  1  PF00686.14 Starch binding domain


Domain annotation for each model (and alignments):
>> PF00686.14  Starch binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.2e-06      0.11      27      59 ..       1      33 [.       1      35 [] 0.82

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.2e-06
                -----SSS-EETCEEE--TTTTCEEE..EEEEETT CS
  PF00686.14 27 LGnWdpakaiklsaseetssyplWsg..tvslpag 59
                +G+ ++ +a++l ++ e  +yp+W++   + +p g
  MMETSP1325-20131115|3284_1  1 MGRNNTTEALPLVTTPE--EYPVWRTpkPILIPRG 33
                799**********9977..******9665666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 158.25
//
Query:       MMETSP1325-20131115|3286_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00016   21.1   7.1    0.00018   20.9   4.9    1.1  1  PF00038.16 Intermediate filament protein
  ------ inclusion threshold ------
      0.033   13.9   7.4       0.77    9.4   5.6    1.9  2  PF09744.4  JNK_SAPK-associated protein-1
          4    7.4  17.1      0.094   12.7   6.1    2.0  2  PF05835.7  Synaphin protein
        4.2    6.8   6.7         32    3.9   4.7    1.9  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   4.9   5.4e-08   0.00018     156     254 ..      30     127 ..      22     151 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 5.4e-08
  PF00038.16 156 nvevdaarkldLtkilkeiraqyeelaeknreeaeewykakleelqeeaeknsealrsakeeitelrrqiqsleieleslkkqkeslerqlaeleerle 254
                  + +++ +k+ ++++++e+r+  +e+ +k +  +ee ++ak + l+++ + +++++++     + l  +i ++ +ele+l ++ ++le q + l    e
  MMETSP1325-20131115|3286_1  30 AAGLENGEKQSMDEVMAELRE-LDEMRAKEMVRLEEEFEAKRKLLEDKYSAQESMVSQFALKKAALEGRIAEMDAELEALDEMDKALEGQARPLPGAAE 127
                 566788999**********96.89999999***********************************************************9987765555 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   5.6   0.00023      0.77      52     124 ..      31     103 ..      21     114 .. 0.85
   2 ?    5.1   0.0    0.0048        16      87     141 ..      94     151 ..      91     153 .] 0.82

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00023
   PF09744.4  52 lelleedkerLskqyerekelrkqaeekllelEdeleqekkelekkieeleeevrqlelkaknlsdkvsrLee 124
                 + l++ +k+ + + +   +el + + +++++lE+e+e ++k le k    e++v q+ lk+  l+ ++ +++ 
  MMETSP1325-20131115|3286_1  31 AGLENGEKQSMDEVMAELRELDEMRAKEMVRLEEEFEAKRKLLEDKYSAQESMVSQFALKKAALEGRIAEMDA 103
                 567888999999999999****************************************999998888877654 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0048
   PF09744.4  87 leqekkelekkieeleeevrqlelkaknl...sdkvsrLeeretelkkeyeslheret 141
                 le+   e++ ++e l+e+ + le +a+ l   ++ + ++ e e e+  e es  e+et
  MMETSP1325-20131115|3286_1  94 LEGRIAEMDAELEALDEMDKALEGQARPLpgaAESDGEMAEGEGEVAAEAESKTEAET 151
                 56677789999************99996433378899999999999999999998887 PP

>> PF05835.7  Synaphin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   6.1   2.8e-05     0.094      29      97 ..      34     100 ..       2     124 .. 0.72
   2 ?   -0.6   1.5      0.34   1.2e+03     102     115 ..     136     149 ..     106     153 .] 0.51

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.8e-05
                 -.------------------HHHHHHHHHHHHHHHHHHHHHHH--------..---------------- CS
   PF05835.7  29 eekaeeeeeevqealreaeerRkekyrkmeeERekmRqgiRDKYgikKkeedeeepqaaaeeeeGrlgr 97 
                 e+ +++ ++ev + lre +e R +   + eeE e  R+ + DKY  +      ++ ++ + + eGr+  
  MMETSP1325-20131115|3286_1  34 ENGEKQSMDEVMAELRELDEMRAKEMVRLEEEFEAKRKLLEDKYSAQESMV--SQFALKKAALEGRIAE 100
                 234458899***********************************9987777..7777665666999865 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.34
                 XXXXXXXXXXXXXX CS
   PF05835.7 102 peElAaeaeeeeee 115
                   E+Aaeae+++e 
  MMETSP1325-20131115|3286_1 136 EGEVAAEAESKTEA 149
                 22444444444443 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   4.7    0.0094        32      81     120 ..      75     114 ..      33     149 .. 0.52

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0094
   PF04156.9  81 eelsesesqlseleeeleqleerlaeleseledleedlel 120
                  + s++es++s+++ +  +le r+ae  +ele+l e  + 
  MMETSP1325-20131115|3286_1  75 DKYSAQESMVSQFALKKAALEGRIAEMDAELEALDEMDKA 114
                 2333333333333333333333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       971  (0.0710211); expected 273.4 (0.02)
Passed bias filter:                      542  (0.0396431); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.40s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 678.97
//
Query:       MMETSP1325-20131115|3289_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|3288_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-44  150.1   0.0    1.1e-43  149.4   0.0    1.2  1  PF04111.7 Autophagy protein Apg6


Domain annotation for each model (and alignments):
>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.4   0.0   7.8e-48   1.1e-43     101     341 ..      34     257 ..      11     261 .. 0.86

  Alignments for each domain:
  == domain 1    score: 149.4 bits;  conditional E-value: 7.8e-48
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..................XXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX CS
   PF04111.7 101 eelqeekekleeeeeqylrelnkfklkklelekelkslelqleyskrqLdkLrkinvFnatFkishsGsfatinglRLGrlPsvkveWkeinaawGqtvLLLaalakkldlklerYrlkPfGsqsyiekldedsveyiistdrdpndnlvkpkeldlyssgg..lkffkdtkFDkalvafLdilsqfkeevekketeallpykiesekgkinDvensggslsikl.afnkdeqWtkalkFlLtn 341
                 +e+q ++ k+ e +e++l  l+ ++ ++  ++++  s++   e+  +qL+   ++n  n+ F+i+h+G+f+ting+RLGrlP  +veW+einaa+Gq+ LLL+++ ++  l+l+   l P+Gs+s +   +++            ++   k+k+++ly+s g  l f ++  F kal+ +L+i+ + ++ ++++++ + lpy++  + g+ +++        i +   n+de Wt+alkF+Lt+
  MMETSP1325-20131115|3288_1  34 VEIQRKQWKVAELREKWLCSLQGIQFERSLIQEQRASVKSLAEHCATQLEATSQMNAANDCFYIWHAGPFGTINGFRLGRLPVETVEWHEINAALGQVALLLETIENETPLQLS-LTLLPLGSYSQVAIPNSQ------------GKVDEKSKRFNLYASDGgvLSFGQKGSFHKALEYLLQIIGEAGNYISEQDPAFRLPYAVS-DGGRYINN------IPITYgGSNSDELWTRALKFMLTD 257
                 57888899999999999999999999999999*******************************************************************************986.7999******99877664............555668999****98653366777788********************************5.44433333......23333157***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 1219.57
//
Query:       MMETSP1325-20131115|3290_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-08   33.8   0.2    4.9e-08   32.8   0.1    1.5  1  PF13243.1  Prenyltransferase-like
    1.1e-05   25.7   0.0    1.3e-05   25.4   0.0    1.2  1  PF13249.1  Prenyltransferase-like
     0.0029   16.7   0.0     0.0043   16.1   0.0    1.3  1  PF09492.5  Pectic acid lyase
  ------ inclusion threshold ------
       0.19   11.1  10.4        3.5    7.1   0.0    3.1  2  PF00432.16 Prenyltransferase and squalene oxidase repeat


Domain annotation for each model (and alignments):
>> PF13243.1  Prenyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.1   1.4e-11   4.9e-08      13      81 ..       2      88 ..       1     104 [. 0.71

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 1.4e-11
   PF13243.1 13 nedGsWkynsgd...................dvsvtaallralaaagdaavdeaikkavdwlldqqqedGgfgydgaeeaystataia 81
                ne+G+W+   ++                    v +t+++l+al+aa+  +   a+k++v++l++ q ++G +  +g + ++++a +i 
  MMETSP1325-20131115|3290_1  2 NENGGWGEDFTScfnkiyakegmkllgdggsGVVCTGWALLALMAAEC-EDTGAVKRGVQYLMRRQLPNGDWPQEGISGVFNRACGIT 88
                678899655332222233334444555444368889999999998887.66789*********************9999988877765 PP

>> PF13249.1  Prenyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   3.8e-09   1.3e-05       9      78 ..       2      88 ..       1     115 [. 0.74

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 3.8e-09
   PF13249.1  9 npdGgwgaa.....gq.............esdvasTalallaLaalgeted..rdkvegldwllsqqnedGgfgssgagneadlsttaaa 78
                n++Ggwg++     ++             +s v  T++allaL+a++ ++   +++   +++l ++q ++G +   g ++    +++ ++
  MMETSP1325-20131115|3290_1  2 NENGGWGEDftscfNKiyakegmkllgdgGSGVVCTGWALLALMAAECEDTgaVKRG--VQYLMRRQLPNGDWPQEGISGV-FNRACGIT 88
                89*****6554444114444445555555**************88777774347777..**************99887764.45555555 PP

>> PF09492.5  Pectic acid lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.3e-06    0.0043      62      83 ..      53      74 ..      35      98 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.3e-06
                HHHH---HHHHHHS------BS CS
   PF09492.5 62 daaekgldyllaaqypnGGwpq 83
                 a+++g++yl++ q pnG wpq
  MMETSP1325-20131115|3290_1 53 GAVKRGVQYLMRRQLPNGDWPQ 74
                599******************* PP

>> PF00432.16  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   6.1     0.083   2.8e+02      15      43 ..       2      47 ..       1      48 [. 0.85
   2 ?    7.1   0.0     0.001       3.5       3      18 ..      55      70 ..      54      72 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.083
                H-----BS-TCC.................CCSCCCHHHHHHHHHHH CS
  PF00432.16 15 npdGGwggrpgs.................esdtyytywalaaLall 43
                n++GGwg++  s                  s ++ t wal+aL+++
  MMETSP1325-20131115|3290_1  2 NENGGWGEDFTScfnkiyakegmkllgdgGSGVVCTGWALLALMAA 47
                799******9999999999999999998866888899999999876 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.001
                HHHHHHHHHHHSH--- CS
  PF00432.16  3 vekavdfLlscQnpdG 18
                v++ v++L+++Q p+G
  MMETSP1325-20131115|3290_1 55 VKRGVQYLMRRQLPNG 70
                6889**********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 528.85
//
Query:       MMETSP1325-20131115|3282_1  [L=356]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00066   19.2   5.4     0.0064   16.0   4.1    2.2  2  PF13639.1  Ring finger domain
      0.002   17.6   3.3     0.0049   16.3   2.3    1.7  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.012   15.3   3.0      0.028   14.1   2.1    1.7  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
      0.055   13.0   5.7       0.14   11.7   3.7    1.9  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
        0.1   12.6   0.9       0.21   11.6   0.6    1.5  1  PF12678.2  RING-H2 zinc finger


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   4.1   2.4e-06    0.0064       2      35 ..     122     154 ..     121     167 .. 0.82
   2 ?   -0.6   0.1      0.36   9.9e+02       2      14 ..     163     175 ..     162     180 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.4e-06
   PF13639.1   2 eCaiCldelsegeevvrlpCgHvfHeeCldewlr 35 
                 +C+ C   + ++++   lpCgH fH +C ++  r
  MMETSP1325-20131115|3282_1 122 VCSTCGGGT-RRTNSLSLPCGHQFHFDCAKHAHR 154
                 799999999.6899**************998655 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.36
   PF13639.1   2 eCaiCldelsege 14 
                 eC+ C ++l  +e
  MMETSP1325-20131115|3282_1 163 ECVGCGYQLRPEE 175
                 8*****9996544 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   2.3   1.8e-06    0.0049       3      43 ..     121     167 ..     119     172 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.8e-06
   PF13920.1   3 ktCvvCle..readvlllpCgHlclCeeCaerllk.....rkkkCpiC 43 
                 + C  C    r+++ l lpCgH+ +  +Ca++ ++        +C  C
  MMETSP1325-20131115|3282_1 121 NVCSTCGGgtRRTNSLSLPCGHQ-FHFDCAKHAHRslprpIITECVGC 167
                 569999974467889********.********9887777766777766 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.1     1e-05     0.028       4      44 ..     122     167 ..     119     169 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1e-05
   PF13923.1   4 sCpiCleelen..pviltpCgHlyCkkCieqwlekskkk.....CPiC 44 
                 +C+ C    +      ++pCgH ++ +C+++  ++  ++     C  C
  MMETSP1325-20131115|3282_1 122 VCSTCGGGTRRtnS-LSLPCGHQFHFDCAKHAHRS-LPRpiiteCVGC 167
                 57777665533326.68***********9875555.332223337666 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.45   1.2e+03      25      41 .]     108     126 ..     106     126 .. 0.54
   2 ?   11.7   3.7   5.1e-05      0.14       1      33 [.     123     158 ..     123     167 .. 0.70

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.45
                 HHHHHHCS..T-----TTT CS
  PF00097.20  25 Cirkilks..rkkvkCPlC 41 
                 C++ i ++   + + C +C
  MMETSP1325-20131115|3282_1 108 CLVLIFEYakGEMNVCSTC 126
                 6666666654233338888 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 5.1e-05
                 -TTTSSS-SSEE..BSCTS-EE-CHHHHHHHCS..T CS
  PF00097.20   1 CpiCleeakepn.elleCkHsfCskCirkilks..r 33 
                 C+ C      +n  +l+C+H+f+++C ++  +s  r
  MMETSP1325-20131115|3282_1 123 CSTCGGGTRRTNsLSLPCGHQFHFDCAKHAHRSlpR 158
                 777766665555589***********9998776652 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.6   7.7e-05      0.21      32      62 ..     122     150 ..     104     157 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.7e-05
   PF12678.2  32 lcpeckapgksdecpvawgeCgHaFHlhCis 62 
                  c +c     + + ++ +  CgH+FH++C +
  MMETSP1325-20131115|3282_1 122 VCSTCGGGT-RRTNSLSL-PCGHQFHFDCAK 150
                 455555444.33344444.6*********76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.54
# Mc/sec: 1579.82
//
Query:       MMETSP1325-20131115|3292_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-29  101.2   0.0    2.5e-19   69.2   0.0    2.1  2  PF12796.2  Ankyrin repeats (3 copies)
    3.9e-24   83.0   0.4    2.9e-09   36.1   0.0    4.0  4  PF00023.25 Ankyrin repeat
    4.4e-16   57.2   0.0    5.4e-07   29.1   0.0    3.7  4  PF13606.1  Ankyrin repeat
    2.2e-15   56.5   0.0    1.2e-06   28.6   0.0    3.1  3  PF13637.1  Ankyrin repeats (many copies)
    2.2e-14   53.0   0.1    2.4e-06   27.4   0.0    3.6  4  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.062   12.9   0.7       0.21   11.3   0.2    1.9  2  PF05754.9  Domain of unknown function (DUF834)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   1.1e-22   2.5e-19       9      86 ..       1      83 [.       1      86 [. 0.95
   2 !   36.0   0.0   2.6e-12   5.9e-09      28      78 ..      58     115 ..      51     116 .] 0.91

  Alignments for each domain:
  == domain 1    score: 69.2 bits;  conditional E-value: 1.1e-22
   PF12796.2  9 nlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklLlekgadvn 86
                ++e+v+ L+e ga+v++    g tp+ +A++ g++e+v++L++agad+   +  +g++pL++A+ ngh+e+v  Ll++gad++
  MMETSP1325-20131115|3292_1  1 HVEVVRVLHELGANVETpekdGATPVLIASQLGHVEVVRVLVQAGADLSICMaGSGWSPLFVAAWNGHAEVVAELLQHGADPS 83
                689***************999999***********************9776679***************************97 PP

  == domain 2    score: 36.0 bits;  conditional E-value: 2.6e-12
   PF12796.2  28 tpLhlAaeagnleivklLleagadvnakd.......kegntpLhlAvrnghlelvklL 78 
                 +pL++Aa++g+ e+v  Ll++gad+ + +         g t+L +A  +gh  +v++L
  MMETSP1325-20131115|3292_1  58 SPLFVAAWNGHAEVVAELLQHGADPSTVTaqehfkiPAGSTALSVAQLKGHRGVVEML 115
                 49***********************776677789999*******************98 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0035       7.9      14      28 ..       1      15 [.       1      19 [. 0.93
   2 !   29.6   0.0   1.5e-10   3.3e-07       1      31 [.      21      51 ..      21      53 .. 0.95
   3 !   36.1   0.0   1.3e-12   2.9e-09       2      32 ..      56      86 ..      55      87 .. 0.93
   4 !    6.8   0.0    0.0025       5.8       2      21 ..      96     115 ..      95     115 .. 0.96

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0035
                HHHHHHHHHHTTSST CS
  PF00023.25 14 nlevvklLlsqGAdl 28
                ++evv+ L + GA++
  MMETSP1325-20131115|3292_1  1 HVEVVRVLHELGANV 15
                89************8 PP

  == domain 2    score: 29.6 bits;  conditional E-value: 1.5e-10
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaq 31
                dG TP  +A++ g++evv+ L+++GAdl ++
  MMETSP1325-20131115|3292_1 21 DGATPVLIASQLGHVEVVRVLVQAGADLSIC 51
                89**************************875 PP

  == domain 3    score: 36.1 bits;  conditional E-value: 1.3e-12
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                G++PL +Aa +g++evv  Ll++GAd+  ++
  MMETSP1325-20131115|3292_1 56 GWSPLFVAAWNGHAEVVAELLQHGADPSTVT 86
                9*************************98766 PP

  == domain 4    score: 6.8 bits;  conditional E-value: 0.0025
                 SCBHHHHHHHTTHHHHHHHH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklL 21 
                 G T+L +A l+g+  vv++L
  MMETSP1325-20131115|3292_1  96 GSTALSVAQLKGHRGVVEML 115
                 89****************98 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.025        56      14      29 ..       1      16 [.       1      17 [. 0.90
   2 !   19.2   0.0   3.6e-07   0.00083       1      29 [.      21      49 ..      21      50 .. 0.94
   3 !   29.1   0.0   2.4e-10   5.4e-07       2      29 ..      56      83 ..      55      84 .. 0.95
   4 ?   -0.6   0.0       0.9     2e+03       2      21 ..      96     115 ..      95     115 .. 0.73

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.025
   PF13606.1 14 rielveaLlengadin 29
                ++e+v+ L e ga++ 
  MMETSP1325-20131115|3292_1  1 HVEVVRVLHELGANVE 16
                789**********985 PP

  == domain 2    score: 19.2 bits;  conditional E-value: 3.6e-07
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +G Tp  +A + g++e+v+ L+++gad++
  MMETSP1325-20131115|3292_1 21 DGATPVLIASQLGHVEVVRVLVQAGADLS 49
                688************************86 PP

  == domain 3    score: 29.1 bits;  conditional E-value: 2.4e-10
   PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                G++pL++Aa ng+ e+v +Ll++gad++
  MMETSP1325-20131115|3292_1 56 GWSPLFVAAWNGHAEVVAELLQHGADPS 83
                9*************************86 PP

  == domain 4    score: -0.6 bits;  conditional E-value: 0.9
   PF13606.1   2 GnTpLhlAasngrielveaL 21 
                 G T+L +A  +g+  +ve L
  MMETSP1325-20131115|3292_1  96 GSTALSVAQLKGHRGVVEML 115
                 66888888777887777766 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   3.4e-08   7.8e-05      13      54 .]       1      42 [.       1      42 [. 0.97
   2 !   28.6   0.0   5.5e-10   1.2e-06       8      50 ..      29      72 ..      27      73 .. 0.92
   3 !   13.0   0.0   4.5e-05       0.1      12      53 ..      67     115 ..      67     116 .] 0.92

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 3.4e-08
   PF13637.1 13 rlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                ++e+v+ L+e g+++    ++G t++ iA + g++e+++ L+
  MMETSP1325-20131115|3292_1  1 HVEVVRVLHELGANVETPEKDGATPVLIASQLGHVEVVRVLV 42
                79*************************************995 PP

  == domain 2    score: 28.6 bits;  conditional E-value: 5.5e-10
   PF13637.1  8 aaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieil 50
                a + g++e+v+ L++ g+d+  +  +sG+++L +Aa++g+ e++
  MMETSP1325-20131115|3292_1 29 ASQLGHVEVVRVLVQAGADLSICmAGSGWSPLFVAAWNGHAEVV 72
                5669***************99999999*************9887 PP

  == domain 3    score: 13.0 bits;  conditional E-value: 4.5e-05
   PF13637.1  12 grlelvklLlekgidinrtdes.......GntaLhiAalrgnieilklL 53 
                 g+ e+v+ Ll++g+d+  + ++       G taL +A l+g+  ++++L
  MMETSP1325-20131115|3292_1  67 GHAEVVAELLQHGADPSTVTAQehfkipaGSTALSVAQLKGHRGVVEML 115
                 6779************999999999999999***********9999998 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   3.5e-05      0.08      28      56 .]       1      29 [.       1      29 [. 0.96
   2 !   27.4   0.0     1e-09   2.4e-06       1      56 []       8      63 ..       8      63 .. 0.96
   3 !   20.6   0.0   1.5e-07   0.00034      18      47 ..      58      87 ..      53      90 .. 0.88
   4 ?    1.7   0.0      0.13     3e+02      15      35 ..      95     115 ..      94     115 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.5e-05
   PF13857.1 28 alevvrlLlapgadlnlrdsdgltaldlA 56
                ++evvr L++ ga+  + ++dg t++ +A
  MMETSP1325-20131115|3292_1  1 HVEVVRVLHELGANVETPEKDGATPVLIA 29
                79***********************9887 PP

  == domain 2    score: 27.4 bits;  conditional E-value: 1e-09
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdg.ltaldlA 56
                L+e g a+v + ++ g tp  +A   g++evvr L+++gadl ++ +   +++l +A
  MMETSP1325-20131115|3292_1  8 LHELG-ANVETPEKDGATPVLIASQLGHVEVVRVLVQAGADLSICMAGSgWSPLFVA 63
                89999.****************************************99999999876 PP

  == domain 3    score: 20.6 bits;  conditional E-value: 1.5e-07
   PF13857.1 18 tpLhlAakggalevvrlLlapgadlnlrds 47
                +pL +Aa++g++evv +Ll++gad+ + ++
  MMETSP1325-20131115|3292_1 58 SPLFVAAWNGHAEVVAELLQHGADPSTVTA 87
                78999*******************988765 PP

  == domain 4    score: 1.7 bits;  conditional E-value: 0.13
   PF13857.1  15 ggntpLhlAakggalevvrlL 35 
                 +g+t+L +A  +g+  vv++L
  MMETSP1325-20131115|3292_1  95 AGSTALSVAQLKGHRGVVEML 115
                 68899****99***9999997 PP

>> PF05754.9  Domain of unknown function (DUF834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.47   1.1e+03      24      37 ..      11      24 ..       6      27 .. 0.78
   2 ?   11.3   0.2   9.2e-05      0.21      37      63 ..      63      89 ..      62      90 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.47
   PF05754.9 24 kGgaarvdddgGAP 37
                 G+++++ + +GA+
  MMETSP1325-20131115|3292_1 11 LGANVETPEKDGAT 24
                58888999999996 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 9.2e-05
   PF05754.9 37 PavggenggadelldltAkptvatptd 63
                +a +g  + ++ell+  A p ++t+++
  MMETSP1325-20131115|3292_1 63 AAWNGHAEVVAELLQHGADPSTVTAQE 89
                58899********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 604.30
//
Query:       MMETSP1325-20131115|3294_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|3295_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-41  140.7   0.0    4.9e-41  140.4   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
    4.6e-41  140.5   0.0    5.9e-41  140.2   0.0    1.0  1  PF00069.20 Protein kinase domain
     0.0089   15.6   0.1      0.018   14.6   0.1    1.5  1  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.4   0.0   1.1e-44   4.9e-41      42     259 .]      32     261 ..       8     261 .. 0.89

  Alignments for each domain:
  == domain 1    score: 140.4 bits;  conditional E-value: 1.1e-44
                 HHHHHHHHHHHHHHHHT.-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHT......GTTGSBHHHHHHHHHHHHHHHHHHHHTT..EEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE...EEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---...TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH CS
  PF07714.12  42 eeekeefleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlefLrkk......ekekltlkdllkfalqiakGmeyLeskk..lvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk...ftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekp...ekcpeelyelmkqCweeepeeRptfkelvekl 259
                 e++ ++fl+eak+++++ +hp i +++g +    pl +++e++ +G+L e +         +   +    + ++a qia+G+++L++++  ++HrdL + N+Ll++e   k+sDfGL+r    ++   +++++     WmapE+++++    +    Dv+sf v+lwEi+t+   py g ++ +v++++ ++g rl+ p   + cp+ +++l+ +Cw++ p+eRp+f+ +v +l
  MMETSP1325-20131115|3295_1  32 ERTLSDFLSEAKMLRRVgHHPCINSMVGTFE--FPLGLLMEFCGNGNLFEAVACDtwrvdkTGGGIPWPLKRRMAHQIASGVHFLHTQEpaILHRDLKSLNILLDDEWNAKVSDFGLSRFG-ATSVFDRMTGQCGTWMWMAPEVMTATDglaYGPGVDVFSFAVVLWEIATQL-VPYDGWQPPQVVAAVaHRGDRLPLPpisSACPRPFADLIVRCWAQVPDERPSFAGIVACL 261
                 456899**********************998..89****************998888887778888999999**************997779***************************99.77888899999999*********9998888*******************65.******999999999899***988733358************************999875 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.2   0.0   1.3e-44   5.9e-41      26     255 ..      14     258 ..       6     261 .. 0.89

  Alignments for each domain:
  == domain 1    score: 140.2 bits;  conditional E-value: 1.3e-44
                 EEEEEEEEGGGHHHHHHHHHHH.....HHHHHHHH.H-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH........HHCCB-HHHHHHHHHHHHHHHHHHHHT..CEE-S--SGGGEEEETT--EEE------EEE.CEESS-CSS----GGGS-HHHHH..TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHH CS
  PF00069.20  26 kvAvKilkkeeekskkektavr.....Elkilkkl.sHpnivkllevfeekdelylvleyveggdlfdllk........kegklseeeikkialqilegleylHsn..giiHrDLKpeNiLldkkgelkiaDFGlakkl.eksseklttlvgtreYmAPEvll..kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeil 255
                  vA K+l+ ++  s++  ++++     E+k+l+++ +Hp+i +++++fe    l l++e++ +g+lf++++        + g + +   +++a qi++g+++lH +  +i+HrDLK+ NiLld++ + k++DFGl++   ++   ++t ++gt  +mAPEv+   ++  y++ vDv+s++v+l+e++t+ +p++g +  +  + ++++ ++    ++++ ++  + + dli +++++ p++R++++ i+
  MMETSP1325-20131115|3295_1  14 YVAFKKLEVPKGTSSAVLERTLsdflsEAKMLRRVgHHPCINSMVGTFE--FPLGLLMEFCGNGNLFEAVAcdtwrvdkTGGGIPWPLKRRMAHQIASGVHFLHTQepAILHRDLKSLNILLDDEWNAKVSDFGLSRFGaTSVFDRMTGQCGTWMWMAPEVMTatDGLAYGPGVDVFSFAVVLWEIATQLVPYDGWQPPQVVAAVAHRGDRLPLPPISSACP--RPFADLIVRCWAQVPDERPSFAGIV 258
                 589999999887777665555579999********99***********5..567799******************999999999*********************9889***************************976677778****************87668899***************************77777777777777666667666666..9*******************98765 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1     4e-06     0.018     141     198 ..      99     150 ..      72     175 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 4e-06
                 THHHHHHHHHHHHHHHHHHHHC..SS--EEB-SS-SGGGEEEETTTTEEEE---TT-BBE CS
  PF01636.18 141 llelleeleervlaalaallpg..aeppvllHgDlhpgNllvdpddgrvgviDfedaglg 198
                 l++   +     + ++a+ ++    ++p++lH+Dl++ N+l+d++ +   v Df+++++g
  MMETSP1325-20131115|3295_1  99 LKR---R----MAHQIASGVHFlhTQEPAILHRDLKSLNILLDDEWNAK-VSDFGLSRFG 150
                 444...3....3334455555566689****************544444.9999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1457.78
//
Query:       MMETSP1325-20131115|3299_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 591.10
//
Query:       MMETSP1325-20131115|3300_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.43   10.3   0.1       0.43   10.3   0.1    2.9  2  PF00228.15 Bowman-Birk serine protease inhibitor family


Domain annotation for each model (and alignments):
>> PF00228.15  Bowman-Birk serine protease inhibitor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   3.2e-05      0.43      10      23 ..      51      64 ..      42      65 .. 0.91
   2 ?    0.4   0.9      0.04   5.5e+02       5      17 ..     134     148 ..     126     149 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 3.2e-05
                SSSTEEEEEEEESS CS
  PF00228.15 10 SiPPrcvCtDvflg 23
                S P+ c C D f+g
  MMETSP1325-20131115|3300_1 51 SGPGSCSCKDLFHG 64
                99**********99 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.04
                 EEEES..SSSTEEEE CS
  PF00228.15   5 Cvctr..SiPPrcvC 17 
                 C  ++  S ++ c C
  MMETSP1325-20131115|3300_1 134 CNNAEqiSGNGTCAC 148
                 666667788888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 790.80
//
Query:       MMETSP1325-20131115|3297_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00011   21.8   0.2      0.002   17.7   0.2    2.1  2  PF07998.6 Peptidase family M54


Domain annotation for each model (and alignments):
>> PF07998.6  Peptidase family M54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.011   1.5e+02      65     127 ..       5      65 ..       3      83 .. 0.57
   2 !   17.7   0.2   1.5e-07     0.002     144     174 ..     121     152 ..     114     171 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.011
                 ---EEHHHHHHHH------..-..SEE........E--BSS-EE-----.-B---B-----BB--B CS
   PF07998.6  65 rleavveallgkLkemkdd..vndDsitkifgittlplgsrdqyidiyk.kvlGievsiGnyavla 127
                 rl+  v+ ll++L  +++      D    i+g+t + l s     d  + +v G++    n av +
  MMETSP1325-20131115|3297_1   5 RLQVHVDPLLSELGRIRQAggSAVDDCYAIMGVTMIDLYS-----DSTDlFVAGMAAGGSNVAVFS 65 
                 6788888888888888853112233344677776665544.....333314455555555555555 PP

  == domain 2    score: 17.7 bits;  conditional E-value: 1.5e-07
                 HHHHHHHHH----------S-.TSTTS--SSH CS
   PF07998.6 144 rvvkevlhelGhlyGLshCke.dCvmnfsndl 174
                 r  k ++he+ h++G+ hC   +C+m+ +  l
  MMETSP1325-20131115|3297_1 121 RSGKLLVHEMMHIFGIDHCVAyECIMKGTGHL 152
                 666889**************99****977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.55
# Mc/sec: 1355.03
//
Query:       MMETSP1325-20131115|3301_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-26   92.6   7.9    1.7e-26   92.6   5.5    1.0  1  PF04515.7 Plasma-membrane choline transporter
  ------ inclusion threshold ------
       0.16   10.9   0.9        8.1    5.5   0.1    2.4  2  PF14029.1 Protein of unknown function (DUF4244)


Domain annotation for each model (and alignments):
>> PF04515.7  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.6   5.5   2.5e-30   1.7e-26     149     241 ..       4      96 ..       1     100 [] 0.95

  Alignments for each domain:
  == domain 1    score: 92.6 bits;  conditional E-value: 2.5e-30
   PF04515.7 149 asfkraltyslGSiafGSLivaiiqliRilleylneklkeaenklvkfllcclkcclwclekfvkflNrnAYvmiaiyGksFctsAkdafell 241
                  sf+ra+t +lG i+fGSL++ai++++ +++ +l++++k+++nk++++ l+c+ c+++cle+++k+++ +A++ ++iyG+sF+++  +++  +
  MMETSP1325-20131115|3301_1   4 MSFCRATTWNLGAICFGSLLIAIVKTLEAVIAFLEKQAKKSGNKIAEYALMCIGCIMKCLEECIKYMTAYAFCFVGIYGHSFMKAGYEVLVCI 96 
                 69***********************************************************************************99887666 PP

>> PF14029.1  Protein of unknown function (DUF4244)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1    0.0012       8.1      26      41 ..      14      29 ..      12      43 .. 0.80
   2 ?    4.2   0.0    0.0029        20       9      26 ..      39      56 ..      32      59 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0012
   PF14029.1 26 lAAvAfAgvLyvvvts 41
                l A  f+ +L+++v+ 
  MMETSP1325-20131115|3301_1 14 LGAICFGSLLIAIVKT 29
                6899**********86 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0029
   PF14029.1  9 rasgdaGmaTaEYAigtl 26
                ++++ +G   aEYA++++
  MMETSP1325-20131115|3301_1 39 KQAKKSGNKIAEYALMCI 56
                5666778888*****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       751  (0.0549298); expected 273.4 (0.02)
Passed bias filter:                      584  (0.042715); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|3304_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1253  (0.0916472); expected 273.4 (0.02)
Passed bias filter:                      613  (0.0448362); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 403.60
//
Query:       MMETSP1325-20131115|3305_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 248.35
//
Query:       MMETSP1325-20131115|3296_1  [L=502]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.79u 0.40s 00:00:01.19 Elapsed: 00:00:00.62
# Mc/sec: 1940.28
//
Query:       MMETSP1325-20131115|3306_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.6   0.3       0.24   10.6   0.1    1.7  2  PF12841.2 YvrJ protein family


Domain annotation for each model (and alignments):
>> PF12841.2  YvrJ protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.11   1.5e+03      30      37 ..      20      27 ..      19      28 .. 0.75
   2 ?   10.6   0.1   1.7e-05      0.24      20      38 .]      32      50 ..      28      50 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.11
   PF12841.2 30 sIneLska 37
                s ++L+++
  MMETSP1325-20131115|3306_1 20 STKKLKNK 27
                78899987 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 1.7e-05
   PF12841.2 20 iEkkldaLtksIneLskai 38
                +E+++ +Lt s + Ls++i
  MMETSP1325-20131115|3306_1 32 FESDIAELTGSFESLSEKI 50
                8****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|3302_1  [L=431]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-12   45.5   0.0    1.4e-11   44.7   0.0    1.4  1  PF04055.16 Radical SAM superfamily


Domain annotation for each model (and alignments):
>> PF04055.16  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0     1e-15   1.4e-11       4     165 ..     173     334 ..     170     335 .. 0.92

  Alignments for each domain:
  == domain 1    score: 44.7 bits;  conditional E-value: 1e-15
                 CCEESS--TT-CCCTCHHHHHHHHHHHHHHHHHHHHHHTCS-CEEEEE---SGGGTTTHHHHHHHHHHCH....EECCEEEEEE-SSCH.HHHHHHHHHTT-SEEEEEEESSSHHHHHHCCT.CTS-HHHHHHHHHHHHHHSSET..EEEEEEEECTTTCHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxx RF
  PF04055.16   4 trgCnlrCsfCanpetsregrgrsrsveeileevkelkeekgvkevtltGgepllypdfvellerlakla....lpgirialetngtlpdeeileelaelgvdrvslglesgdeekvlklmr.rghtfeevlealeklreagikr..vvdfivglpgetdeeleellel 165
                    C+++CsfCa+++    + +  ++++e +  ++    e+g ++v+lt+ + ++ pd     +++  +     + ++ +   t+ ++ + +++  +a +g+d++++++e++ +  +++++r  +  + + l++l ++++a  +   +++ ++++ ge +e+++++l++
  MMETSP1325-20131115|3302_1 173 GDTCTRGCSFCAVKT---SRAPPPLDPDEPEHVAEAV-TEWGLDYVVLTSVDRDDIPDQGASHFAATVRGlksrNSKMLVECLTPDFRGELDLVTQIATAGLDVYAHNIETVER--LQRRVRdHRAGYHQSLAVLAHAKAA-APHllTKTSLMLGVGEHEEDVMATLND 334
                 678***********5...8999999999999999888.7999**************9999999999998899999*************99************************..677777788****************.9999*******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.53
# Mc/sec: 1948.74
//
Query:       MMETSP1325-20131115|3307_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.56
# Mc/sec: 748.34
//
Query:       MMETSP1325-20131115|3308_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 394.96
//
Query:       MMETSP1325-20131115|3310_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|3303_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.9e-11   41.0   0.8    1.2e-10   40.8   0.5    1.1  1  PF04627.8 Mitochondrial ATP synthase epsilon chain


Domain annotation for each model (and alignments):
>> PF04627.8  Mitochondrial ATP synthase epsilon chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.5   8.4e-15   1.2e-10       1      39 [.       6      44 ..       6      54 .. 0.90

  Alignments for each domain:
  == domain 1    score: 40.8 bits;  conditional E-value: 8.4e-15
                --SS-----HHHHHHHHHHHCTTSS-CSSS-HHHHTTS- CS
   PF04627.8  1 saWRaaGlsYnkYssIAAravRqaLKeelrvaAekraei 39
                +aWR aG++Y++ ++ A ++vR+aLKe+ r+ A +r+ +
  MMETSP1325-20131115|3303_1  6 TAWRIAGMTYLQMAATATTTVRSALKEPMRSTALARDAV 44
                59*******************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|3313_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 654.39
//
Query:       MMETSP1325-20131115|3314_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 698.07
//
Query:       MMETSP1325-20131115|3309_1  [L=445]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-11   43.1   0.2      1e-10   41.8   0.1    1.6  2  PF05721.8 Phytanoyl-CoA dioxygenase (PhyH)
     0.0031   17.8   0.0      0.011   16.1   0.0    1.9  2  PF13640.1 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF05721.8  Phytanoyl-CoA dioxygenase (PhyH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       0.5   3.4e+03      89     117 ..      58      84 ..      26     100 .. 0.64
   2 !   41.8   0.1   1.5e-14     1e-10      55     198 ..     179     330 ..     124     334 .. 0.68

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.5
                 EEEEE...E---S-----E.EEE-GGGTS- CS
   PF05721.8  89 lqsmyqd.ifkqpkiGgevqpwHqDstflp 117
                   +my    +k++   +e+ ++H D++ ++
  MMETSP1325-20131115|3309_1  58 ATQMYLGlTNKNA--EAET-DPHTDAAPAS 84 
                 4445533233333..4555.8888876555 PP

  == domain 2    score: 41.8 bits;  conditional E-value: 1.5e-14
                 S........GGTEEEE---HHHHHHHHHHHH----SEEE........EEEEE..E---S-----E.EEE-GGGTS-EE----EE-EEEESS-B-S----EEEE---------..........................-EEE----.............. CS
   PF05721.8  55 l........eksinkvghflhprkvadlvrailgqdvyva.....avlqsmyqdifkqpkiGgevqpwHqDstflptdpeesvvgvwialedateenGclrfiPGSHkweegplrrrlpeddteae...ddeakkedeeeavpvevkaGdavlfhgrllH 198
                           +s++ ++   hp  v + ++ai+g d++ +     +  ++++ + +  p+  + +  wH D+        +++v+  + l da+++ G+l++iPGSH+  e      + + +++a    + e++   + +   v+ +aGd++l+++r++H
  MMETSP1325-20131115|3309_1 179 KgilykrgiGQSDFQWSIRTHP-GVRAAFEAIWGTDELLTsfdgcNIFRPWHSS-AADPSWKTLGGWWHVDQGKSKLG--RHAVQGVVTLRDANAQTGGLCVIPGSHRHHER----IVSDAEGYADyvsISEDDPVMDLPKKLVVAQAGDLILWDSRTVH 330
                 2233666666888999999999.**************98899888555555543.33333333223699999999877..8****************************444....45666666667776777777777778888899************ PP

>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.4   9.6e+03       9      18 ..      71      80 ..      63      95 .. 0.73
   2 !   16.1   0.0   1.6e-06     0.011      14      86 ..     244     335 ..     221     346 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 1.4
   PF13640.1  9 ggflspHvDn 18
                  +  pH+D 
  MMETSP1325-20131115|3309_1 71 EAETDPHTDA 80
                5667799998 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 1.6e-06
   PF13640.1  14 pHvDnse..sssrrltlllylndpeweeeGGelelypsdr...................segvakevedeevvpkpgrlvlFksdrslHrvtpv 86 
                 +HvD  +   +++++  ++ l d++ ++ GG  ++  s+r                   ++++  ++ ++ vv ++g+l+l++s r+ H+ tp+
  MMETSP1325-20131115|3309_1 244 WHVDQGKskLGRHAVQGVVTLRDAN-AQTGGLCVIPGSHRhherivsdaegyadyvsisEDDPVMDLPKKLVVAQAGDLILWDS-RTVHCNTPA 335
                 *****999888999999*****999.455555555555578*********99999999888888888878888***********.*****9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.36s 00:00:01.10 Elapsed: 00:00:00.65
# Mc/sec: 1640.58
//
Query:       MMETSP1325-20131115|3317_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|3316_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-15   55.5   0.0    4.9e-15   55.2   0.0    1.1  1  PF00069.20 Protein kinase domain
      6e-05   22.1   0.0    8.1e-05   21.7   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.0   7.2e-19   4.9e-15     157     260 .]       2     103 ..       1     103 [. 0.85

  Alignments for each domain:
  == domain 1    score: 55.2 bits;  conditional E-value: 7.2e-19
                 S----GGGS-HHHHH.TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 157 tlvgtreYmAPEvll.kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 t++gt  Ym+PE +  ++++y+ ++D+W+lG+ l +l+ g++p+ +   +++   +  i++ +l +     +   ++l+++++++l+++p++Rl+a+++l+ p++
  MMETSP1325-20131115|3316_1   2 TFTGTLAYMSPERIGqEERGYSYPADIWGLGLSLLTLALGRNPLGKI--QNEWDAMSAIQDFSLAKAAGGARL-TADLCHFLESCLQRNPDDRLSAAQLLRLPFI 103
                 899*********9864899*************************987..666666666666666666555543.59************************99986 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   1.2e-08   8.1e-05     169     256 ..       7      98 ..       2     100 .. 0.82

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 1.2e-08
                 GGGS-HHHHHHSE..EEHHHHHHH---HHHHHHTTT-GTTTTSHHH.HHHHHHHTT-B..S---TTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  PF07714.12 169 vkWmapEslkekk..ftsksDvWsfGvllwEiftlgespypglsne.evlellkegkr..lekpekcpeelyelmkqCweeepeeRptfkelv 256
                 + +m+pE + +++  ++  +D+W  G  l  ++  g++p  +++ne ++++++++      +  +  +++l +++++C++++p++R + ++l 
  MMETSP1325-20131115|3316_1   7 LAYMSPERIGQEErgYSYPADIWGLGLSLLTLAL-GRNPLGKIQNEwDAMSAIQDFSLakAAGGARLTADLCHFLESCLQRNPDDRLSAAQLL 98 
                 689******888778**************98875.9*******65527888887655401455678899*****************9998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 845.51
//
Query:       MMETSP1325-20131115|3319_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-06   27.3   0.0    2.4e-06   27.1   0.0    1.0  1  PF07687.9 Peptidase dimerisation domain


Domain annotation for each model (and alignments):
>> PF07687.9  Peptidase dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   1.7e-10   2.4e-06      39      92 ..       6      50 ..       3      51 .. 0.84

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 1.7e-10
   PF07687.9 39 sledeegpiaeerslgrttlnvtgiegGtaknvipdeaeakidiRllpgedpee 92
                ++ d+e         +  t+nv++++gGt +n++p++a + +++R  ++e  e+
  MMETSP1325-20131115|3319_1  6 RMTDYE---------RAITFNVGVVQGGTVVNTVPSHAVCVVEMRAADEEVSEQ 50
                555553.........349***************************999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 254.31
//
Query:       MMETSP1325-20131115|3318_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        99  (0.00724108); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.36s 00:00:00.63 Elapsed: 00:00:00.47
# Mc/sec: 234.54
//
Query:       MMETSP1325-20131115|3320_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0045   16.6   2.9     0.0062   16.1   2.0    1.2  1  PF07926.7 TPR/MLP1/MLP2-like protein
     0.0093   16.1   1.3      0.014   15.6   0.9    1.3  1  PF06156.8 Protein of unknown function (DUF972)
  ------ inclusion threshold ------
      0.015   14.8   0.1       0.02   14.4   0.1    1.2  1  PF08286.6 Spc24 subunit of Ndc80
      0.016   13.8   0.9      0.021   13.5   0.6    1.1  1  PF04912.9 Dynamitin
      0.051   13.6   4.6      0.084   12.9   3.2    1.3  1  PF05130.7 FlgN protein
      0.055   13.5   0.3       0.11   12.6   0.2    1.6  1  PF11594.3 Mediator complex subunit 28
      0.066   13.3   0.3       0.11   12.6   0.2    1.3  1  PF12998.2 Inhibitor of growth proteins N-terminal histone-binding
       0.16   10.2   3.0       0.22    9.8   2.1    1.1  1  PF09787.4 Golgin subfamily A member 5


Domain annotation for each model (and alignments):
>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   2.0   3.6e-06    0.0062      53     108 ..      12      67 ..       8      81 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.6e-06
   PF07926.7  53 khaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevels 108
                 +h +   eLt+++++++el +e++ l+ ea++ ++el ++ + +  + ++ +++++
  MMETSP1325-20131115|3320_1  12 LHQRRFHELTATRSQVQELLNEVQGLQHEAQALREELAKKDALIAGQANQVDEAVQ 67 
                 6888899******************************9999888877777776665 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.9   7.9e-06     0.014      15      68 ..      11      62 ..       3      87 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 7.9e-06
   PF06156.8 15 eqleelleeleelkkelkelleenaelkleneklrerleelee....eekkkekkkkk 68
                   ++  +el++ +++++ell+e + l+ e ++lre+l++ ++    +      ++++
  MMETSP1325-20131115|3320_1 11 ALHQRRFHELTATRSQVQELLNEVQGLQHEAQALREELAKKDAliagQ------ANQV 62
                555666789999***************************998754321......2222 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   1.2e-05      0.02       3      76 ..       8      84 ..       7     124 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.2e-05
   PF08286.6  3 eldnekvrlakelndleselenlqseleelkeeleeleeqenegkeedeeeaeeedsnilkl...kLYrsLGieles 76
                e++ + +r   el+ + s++++l +e++ l++e + l e++ ++++    +a++ d++++     ++Y+++++e  +
  MMETSP1325-20131115|3320_1  8 EIEALHQRRFHELTATRSQVQELLNEVQGLQHEAQALREELAKKDALIAGQANQVDEAVQHWvlrRVYKEVTVEHRY 84
                678899999**********************************7777777777777777653223678888887766 PP

>> PF04912.9  Dynamitin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.6   1.2e-05     0.021     100     158 ..      24      83 ..       6      91 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.2e-05
   PF04912.9 100 qtevaeLleelqaiqsdskeskeekistval.aevvetlkkqleslklekvlgkktvids 158
                   +v+eLl+e+q +q +++   ee ++++al a +++++ + +++  l +v  + tv++ 
  MMETSP1325-20131115|3320_1  24 RSQVQELLNEVQGLQHEAQALREELAKKDALiAGQANQVDEAVQHWVLRRVYKEVTVEHR 83 
                 457888888888888888888888888888878888888888888888888777777665 PP

>> PF05130.7  FlgN protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.2   4.9e-05     0.084      25      91 ..       6      67 ..       3      77 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.9e-05
   PF05130.7 25 eeEqeaLkagdieaLeelteeKeellaeleeleeerqklleelgleaeeatlsella.edeelaelwq 91
                ++E+eaL+++ + +L+++ ++ +ell+e++ l  e q+l eel+ +      ++l+a +++++ e++q
  MMETSP1325-20131115|3320_1  6 DAEIEALHQRRFHELTATRSQVQELLNEVQGLQHEAQALREELAKK------DALIAgQANQVDEAVQ 67
                68************************************99999997......4555554444444433 PP

>> PF11594.3  Mediator complex subunit 28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   6.4e-05      0.11      38      68 ..      35      69 ..      11      86 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.4e-05
   PF11594.3 38 kvlkEeaqklkeElqrkdqLv....tKidskidyl 68
                + l+ eaq l+eEl++kd+L+    +++d+ ++++
  MMETSP1325-20131115|3320_1 35 QGLQHEAQALREELAKKDALIagqaNQVDEAVQHW 69
                67999****************88777778888887 PP

>> PF12998.2  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   6.5e-05      0.11       3      49 ..      27      73 ..      25      86 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.5e-05
   PF12998.2  3 LedylddvenLPlelqrnltelreiDakvqkrlkelderiekfiken 49
                +++ l+ v+ L++e q + +el ++Da +  + +++de +++++ + 
  MMETSP1325-20131115|3320_1 27 VQELLNEVQGLQHEAQALREELAKKDALIAGQANQVDEAVQHWVLRR 73
                67899*************************************98655 PP

>> PF09787.4  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.1   0.00013      0.22     114     190 ..       7      79 ..       2      87 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00013
   PF09787.4 114 qelaqelrelkseledlrsersedlsleesikrLqrgavrsLqdkLseldeavkredgnvitavliflkrtlkleil 190
                 +e++++++++  el ++   rs+  +l ++++ L + ++++L+++L+  d+ ++ + + v +av  ++ r + +e+ 
  MMETSP1325-20131115|3320_1   7 AEIEALHQRRFHELTAT---RSQVQELLNEVQGL-QHEAQALREELAKKDALIAGQANQVDEAVQHWVLRRVYKEVT 79 
                 57778888888888888...88888899999999.7788*****************************999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       987  (0.0721913); expected 273.4 (0.02)
Passed bias filter:                      810  (0.0592452); expected 273.4 (0.02)
Passed Vit filter:                       139  (0.0101668); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 1036.68
//
Query:       MMETSP1325-20131115|3322_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.40s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|3321_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-27   92.7   3.7    9.9e-27   92.3   2.6    1.2  1  PF04758.9 Ribosomal protein S30
  ------ inclusion threshold ------
      0.051   13.2   0.2      0.057   13.0   0.1    1.1  1  PF11933.3 Domain of unknown function (DUF3451)


Domain annotation for each model (and alignments):
>> PF04758.9  Ribosomal protein S30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   2.6   1.4e-30   9.9e-27       2      58 ..      50     108 ..      49     109 .. 0.93

  Alignments for each domain:
  == domain 1    score: 92.3 bits;  conditional E-value: 1.4e-30
   PF04758.9   2 vhGsLarAGKVrnqTPkvekq.ekkkkkkGRAkkRlkYnrRfvnvvstag.kkkgpNsq 58 
                 vhGsLarAGKV++qTPkve + ekkk ++GRAkkR++YnrRfvnv++ ag kk gpNs+
  MMETSP1325-20131115|3321_1  50 VHGSLARAGKVKGQTPKVEPSgEKKKLPTGRAKKRMQYNRRFVNVATAAGgKKLGPNSN 108
                 9*****************976488899*******************9988899****98 PP

>> PF11933.3  Domain of unknown function (DUF3451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   8.3e-06     0.057     114     183 ..      17      85 ..       7     112 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 8.3e-06
   PF11933.3 114 slvvPwrykrrsshssytShsSris..kltsnGkllstvdqnGvvsltkesslra.pstsgsllpevtmekvk 183
                 s ++Pwr  r ss  s +S  S  +    + +   +++++ +G+v+   +++++  ps  +++lp    +k  
  MMETSP1325-20131115|3321_1  17 SPALPWRIVRVSS-ASSRSPLSPAHvaRPPLHTLVHGSLARAGKVK---GQTPKVePSGEKKKLPTGRAKKRM 85 
                 6689***666666.5559999999999999**************98...333333456666666665544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|3323_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       660  (0.0482738); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|3325_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 465.45
//
Query:       MMETSP1325-20131115|3328_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       100  (0.00731422); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 300.63
//
Query:       MMETSP1325-20131115|3331_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|3332_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 404.09
//
Query:       MMETSP1325-20131115|3333_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.55
# Mc/sec: 165.57
//
Query:       MMETSP1325-20131115|3334_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       756  (0.0552955); expected 273.4 (0.02)
Passed bias filter:                      619  (0.045275); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 596.64
//
Query:       MMETSP1325-20131115|3335_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 1029.55
//
Query:       MMETSP1325-20131115|3337_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-29  100.3   0.2    7.4e-29  100.1   0.2    1.1  1  PF00071.17 Ras family
    6.2e-12   44.9   0.1    7.7e-12   44.6   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    9.8e-09   34.5   0.0    1.3e-08   34.1   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
      4e-07   30.4   0.0    7.9e-07   29.4   0.0    1.5  1  PF08477.8  Miro-like protein
    1.2e-06   27.9   0.0    2.1e-06   27.1   0.0    1.3  1  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
       0.03   12.9   0.1      0.051   12.1   0.0    1.4  1  PF00503.15 G-protein alpha subunit
        0.1   11.6   0.0       0.15   11.1   0.0    1.4  1  PF02421.13 Ferrous iron transport protein B


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.1   0.2   3.8e-32   7.4e-29      33     161 ..       2     139 ..       1     140 [. 0.94

  Alignments for each domain:
  == domain 1    score: 100.1 bits;  conditional E-value: 3.8e-32
                 -EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-H..HHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGG.......G-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17  33 gvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsr..esfenvkkwveeikrvaeenvpivLvGnKvDlee.......kravsteegeelakelglkfletSAktnenveeafeellreil 161
                 gvd +++ +++d+k v++++wDTAGqe+f+ ++++yyr++++illvyd++++  + fe+++ w+e++k++a++n++++L+ nK+D+ e        ++ + + ++++a+  g++ + tSAk+  +veea+++++++++
  MMETSP1325-20131115|3337_1   2 GVDYKSRVLTLDDKCVQVQVWDTAGQERFHVITHSYYRGCNAILLVYDVSEEsdTDFERLEYWLEKVKSHASTNCEVALLCNKIDIFEgktpselAQESKIAGAKKVAEAEGIEIFLTSAKSGAGVEEAYNAVVSKAM 139
                 7899999******************************************8762257******************************9999*999988889999*****************************998875 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   3.9e-15   7.7e-12      50     173 ..       9     136 ..       4     138 .. 0.82

  Alignments for each domain:
  == domain 1    score: 44.6 bits;  conditional E-value: 3.9e-15
                 EEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CT..THHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTT...ST.SSSEEEEEEBTTTTB--HHHHHHHHH CS
  PF00025.16  50 veeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadre..RleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellglee...lkgkrkleiqkcsavkgeglkeglewlse 173
                 v +l  k ++++vwD  Gqe+   + ++Y++  +a++ v D+++++   +e  +  L+++ +++   ++ + +l+NK+D+ e  + +el+++ ++     +  ++ +ei+ +sa +g g++e+ + +++
  MMETSP1325-20131115|3337_1   9 VLTLDDKCVQVQVWDTAGQERFHVITHSYYRGCNAILLVYDVSEESdtDFERLEYWLEKV-KSHASTNCEVALLCNKIDIFEGKTPSELAQESKIAGakkVAEAEGIEIFLTSAKSGAGVEEAYNAVVS 136
                 66788899*********************************9988722445555556554.55667799999***************998876665422377999*****************9988765 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.0   6.6e-12   1.3e-08      47     179 ..      16     142 ..       6     146 .. 0.88

  Alignments for each domain:
  == domain 1    score: 34.1 bits;  conditional E-value: 6.6e-12
   PF04670.7  47 nlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqy.speakvfvlihKmDlisedereeifeerkeeireeiedleieeleffaTSiwde.slykAwSkvvqklipnl 179
                  +++++wD+ Gqe+f   +     ++ ++ +++++ V D++ +e ++d+e+++  le+++ + s + +v  l +K+D  + ++ +e+ +e k   +++++++e   +e+f TS+ +   + +A+  vv k + ++
  MMETSP1325-20131115|3337_1  16 CVQVQVWDTAGQERFHVIT-----HSYYRGCNAILLVYDVS-EESDTDFERLEYWLEKVKSHaSTNCEVALLCNKIDIFEGKTPSELAQESKIAGAKKVAEAE--GIEIFLTSAKSGaGVEEAYNAVVSKAMDKQ 142
                 5899********9987774.....7899************9.789**************8753899**************99999999999888888888877..7********98626999******9999765 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0     4e-10   7.9e-07      47     119 .]      12      86 ..       2      86 .. 0.82

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 4e-10
   PF08477.8  47 vdtel..lelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                  d++   +++wd++g+e+++   +   + ++aillvyd+++e+  +  ++l  wl++ ++ +++   v l+ nk+D
  MMETSP1325-20131115|3337_1  12 LDDKCvqVQVWDTAGQERFHVITHSYYRGCNAILLVYDVSEESDTDF-ERLEYWLEKVKSHASTnCEVALLCNKID 86 
                 344445599************76666*************99886665.77888********999999*******98 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   1.1e-09   2.1e-06      59     185 ..       8     137 ..       2     140 .. 0.79

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 1.1e-09
                 EEEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.......S-HHHHHHHHHHHHTT--EEEEEE-TTST.CHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHHH CS
  PF00009.22  59 aaisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.......vepqTeevlrlakklgvkiivviNKiDrv.eaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaivel 185
                  + +l+   k  ++++ Dt G + F   + +  r +++ +lv d++e         e   e+v +   + ++++ +++NKiD   ++ + e+ +e k    +k+ e +   ++++ +Sa++g g+++  +a+v++
  MMETSP1325-20131115|3337_1   8 RVLTLD--DKCVQVQVWDTAGQERFHVITHSYYRGCNAILLVYDVSEEsdtdferLEYWLEKV-KSHASTNCEVALLCNKIDIFeGKTPSELAQESKIAGAKKVAEAE--GIEIFLTSAKSGAGVEEAYNAVVSK 137
                 555555..77789999******************************99555544333333333.333345677***********889999999999977777776664..8***************999999876 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.6e-05     0.051     277     311 ..      60      94 ..      11     103 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHTXGGGSSXEEEEEEEXHHHHHHHTTT CS
  PF00503.15 277 SlklFksicnnkllkntpiiLflNKlDileeKlkk 311
                  l+ + + +++    n+++ L+ NK+Di+e K  +
  MMETSP1325-20131115|3337_1  60 RLEYWLEKVKSHASTNCEVALLCNKIDIFEGKTPS 94 
                 467888889999999***************99765 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.5e-05      0.15     125     173 ..     103     151 ..      55     165 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 7.5e-05
                 B-HHHHHHH----EEEEBCCGTB--HHHHHHHHHHCTCG-XXX..XXX. CS
  PF02421.13 125 idlkkLselLgvpvvktvarkkkgieelleaiievaekeekekkllkys 173
                   +kk +e  g++++ t+a+++ g+ee  +a++++a +++++   ++ +
  MMETSP1325-20131115|3337_1 103 AGAKKVAEAEGIEIFLTSAKSGAGVEEAYNAVVSKAMDKQNRGVSVSSK 151
                 3578999999**********************99999988887665444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       484  (0.0354008); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 938.15
//
Query:       MMETSP1325-20131115|3338_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 531.99
//
Query:       MMETSP1325-20131115|3339_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.29   10.3   6.8       0.63    9.2   4.5    1.8  2  PF01529.15 DHHC palmitoyltransferase
       0.59    9.5   4.4       0.17   11.2   0.5    2.0  2  PF08019.7  Domain of unknown function (DUF1705)


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.17   1.2e+03     143     165 ..      83     105 ..      51     112 .. 0.55
   2 ?    9.2   4.5   9.2e-05      0.63      90     152 ..     115     184 ..      86     223 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.17
  PF01529.15 143 saiallfllfllafhlylilrnm 165
                  a ++l+++ + +  +yl +rn+
  MMETSP1325-20131115|3339_1  83 RARFYLLIFLIYIEFAYLEYRNI 105
                 34444444444444555555554 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 9.2e-05
  PF01529.15  90 NhkyFl........lfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllf 152
                 N  +F+        +++ ++++l+v+++++++ +++r +++ +  ++ ++  +  +++v++s+++ ++l+ 
  MMETSP1325-20131115|3339_1 115 NNDNFIgifdngdtWLVTWVSVLVVLPSVFIVKCILRDCSKPGDEHAKVLCGFL-FVCVIVSFFFAYVLFL 184
                 556676544444445699******************************998886.7777777777766654 PP

>> PF08019.7  Domain of unknown function (DUF1705)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.5   2.5e-05      0.17      68     118 ..     130     182 ..     127     198 .. 0.62
   2 ?   -2.3   0.1      0.36   2.5e+03      70      88 ..     206     224 ..     203     238 .. 0.54

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 2.5e-05
   PF08019.7  68 lllyvlllgvlPallllkvkikkksl..lkellsrlllillsllvilliallf 118
                 l+ +v +l+vlP+++++k  ++  s    +++++ + +++++++v ++ a++ 
  MMETSP1325-20131115|3339_1 130 LVTWVSVLVVLPSVFIVKCILRDCSKpgDEHAKVLCGFLFVCVIVSFFFAYVL 182
                 799****************9954433003333333334444444433333333 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.36
   PF08019.7  70 lyvlllgvlPallllkvki 88 
                 l +l+ ++l  lll+ vk+
  MMETSP1325-20131115|3339_1 206 LVFLVNAILEWLLLVIVKL 224
                 3444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       584  (0.042715); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 1164.63
//
Query:       MMETSP1325-20131115|3342_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-07   29.8  11.2    6.7e-07   29.0   7.7    1.4  1  PF00170.16 bZIP transcription factor
     0.0007   19.2  16.0     0.0007   19.2  11.1    1.6  2  PF07716.10 Basic region leucine zipper
     0.0029   17.4   2.8     0.0047   16.8   1.9    1.4  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
  ------ inclusion threshold ------
       0.01   15.0   2.2      0.012   14.8   1.5    1.1  1  PF08687.6  Apx/Shroom domain ASD2
       0.13   10.5  11.0       0.15   10.3   7.6    1.0  1  PF10243.4  Microtubule-binding protein MIP-T3
       0.15   12.0   9.8       0.29   11.0   6.8    1.4  1  PF09429.5  WW domain binding protein 11
       0.23   11.6   8.2        0.3   11.2   5.7    1.1  1  PF14303.1  No apical meristem-associated C-terminal domain
       0.41   10.0   4.2       0.74    9.2   2.9    1.5  1  PF04977.10 Septum formation initiator
        1.1    7.0   5.6        1.3    6.8   3.9    1.2  1  PF01366.13 Herpesvirus processing and transport protein
        2.6    6.7   4.7        3.4    6.3   3.3    1.2  1  PF14362.1  Domain of unknown function (DUF4407)
        3.3    5.5   9.9        3.8    5.3   6.8    1.1  1  PF02724.9  CDC45-like protein


Domain annotation for each model (and alignments):
>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   7.7   5.4e-10   6.7e-07       5      51 ..      64     110 ..      60     118 .. 0.92

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 5.4e-10
                 CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HH CS
  PF00170.16   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                 + e rk++NR  Ar+ R+RKk ++  L++  +++++e+ aL ke++ 
  MMETSP1325-20131115|3342_1  64 REENRKERNRRHARETRLRKKNYMHSLQQQLEAMTQERNALEKEIND 110
                 6789****************************************985 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       3.3   4.1e+03       4      16 ..      26      38 ..      24      38 .. 0.56
   2 !   19.2  11.1   5.6e-07    0.0007       2      48 ..      61     108 ..      60     115 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 3.3
  PF07716.10  4 eyrerRrrNreAA 16
                ++r+r ++ r AA
  MMETSP1325-20131115|3342_1 26 SKRQRTEKGRGAA 38
                4555555666665 PP

  == domain 2    score: 19.2 bits;  conditional E-value: 5.6e-07
  PF07716.10   2 ddeyrerRr.rNreAArrsRekkkakeeeleervkeLeeeNaqLrqkv 48 
                 +de++e R+ rNr+ Ar +R +kk ++ +l+++++++++e ++L++++
  MMETSP1325-20131115|3342_1  61 PDEREENRKeRNRRHARETRLRKKNYMHSLQQQLEAMTQERNALEKEI 108
                 6888888888**********************************8776 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   1.9   3.8e-06    0.0047       9      66 ..      59     115 ..      58     141 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.8e-06
                 H-HHHHHHHHHH-.TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT.. CS
  PF02403.17   9 enpeavkeklkkRgedkedvdelleldeerrelqveleelqaerNelskeIgkakkkk 66 
                 +np++ +e+ k+R+      ++ l   + + +lq++le + +erN+l keI  +++++
  MMETSP1325-20131115|3342_1  59 DNPDEREENRKERN-RRHARETRLRKKNYMHSLQQQLEAMTQERNALEKEINDKMNAE 115
                 69999999999997.556666777778899*************************876 PP

>> PF08687.6  Apx/Shroom domain ASD2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.5   9.9e-06     0.012      51     147 ..      42     148 ..       6     153 .. 0.63

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 9.9e-06
   PF08687.6  51 assslsyystsaakaelltklkdlq...eeqeeeeeddelkekkveLieslgkkladleeeqealleeiqannalge........eveakvk.eackPnEldkFrmFig 147
                 ++   +++++  + a   + + d      +++++ +  e   +k++ ++sl+++l+  ++e++al +ei+++ ++           + ++++ +a   +++d++r F++
  MMETSP1325-20131115|3342_1  42 KTD--NETNSTSSDAGGDSDNPDEReenRKERNRRHARETRLRKKNYMHSLQQQLEAMTQERNALEKEINDKMNAETgqhscwvkSLRSALAlRAAGCSDVDQWRKFVD 148
                 222..222222222222222222222224555666677788888888**********************9876666556999888777766535666789999999997 PP

>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   7.6   0.00012      0.15     178     266 ..      26     115 ..      11     135 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00012
   PF10243.4 178 ekkekkkdsknkkkdkekekkkeksrksekgkeeerskdeerekeedkgkdretn.rakeeeeesrksseksrrssksekkaeseveask 266
                  k+++ ++ +  + d++++++ + ++  ++g+  +++++ee+ ke++++ +ret+ r+k+ +++ +++ e   ++ ++ +k+  ++ +++
  MMETSP1325-20131115|3342_1  26 SKRQRTEKGRGAAGDAKTDNETNSTSSDAGGDSDNPDEREENRKERNRRHARETRlRKKNYMHSLQQQLEAMTQERNALEKEINDKMNAE 115
                 3444444555666777888999999999999999999999***************99999999888888877777777776654444433 PP

>> PF09429.5  WW domain binding protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   6.8   0.00023      0.29      17      66 ..      64     112 ..      63     117 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00023
   PF09429.5  17 KelkKnKkerqkrReaklakkd.peelkeeldkLkeqesggklekvekekl 66 
                 +e +++ ++r ++Re +l+kk+ +++l+++l++++++   ++lek  ++k+
  MMETSP1325-20131115|3342_1  64 REENRKERNRRHARETRLRKKNyMHSLQQQLEAMTQE--RNALEKEINDKM 112
                 89999999**************779*********999..888888877776 PP

>> PF14303.1  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   5.7   0.00024       0.3      34     100 ..      33     111 ..       9     131 .. 0.49

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00024
   PF14303.1  34 k....ksnsskatnsseenedeeeeeteerkRpeGrKkaKeklrrg.....vekkeklkkksk.....seeeekekeeeek 100
                 k    + + ++++++++++ d   +++++++R e+rK+  ++  r+     ++++ +l+++ +      +++e  ke ++k
  MMETSP1325-20131115|3342_1  33 KgrgaAGDAKTDNETNSTSSDAGGDSDNPDEREENRKERNRRHAREtrlrkKNYMHSLQQQLEamtqeRNALE--KEINDK 111
                 1334333333334444555566666666777888887776543333443334444444222222221111111..111222 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.9   0.00059      0.74      19      49 ..      80     110 ..      65     115 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00059
  PF04977.10  19 lyqlkqeiaalqaelaklkaeneeLeaevkd 49 
                 + ++k+ +  lq++l+++ +e+++Le+e++d
  MMETSP1325-20131115|3342_1  80 RLRKKNYMHSLQQQLEAMTQERNALEKEIND 110
                 5678889999*******************97 PP

>> PF01366.13  Herpesvirus processing and transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.9     0.001       1.3     419     468 ..      42      91 ..      16     117 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.001
  PF01366.13 419 ssgaeakaagearrgedkeaeeeg.........adveellervekdvevRkkaYlekls 468
                 ++++e++++++++          g         ++ +e+ +r +++++ Rkk+Y++ l 
  MMETSP1325-20131115|3342_1  42 KTDNETNSTSSDAG---------GdsdnpdereENRKERNRRHARETRLRKKNYMHSLQ 91 
                 11111111122222.........1222233344678999***************98775 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   3.3    0.0028       3.4     176     231 ..      56     115 ..       8     133 .. 0.54

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0028
   PF14362.1 176 gvaGkGpvykekkealdaaqaeletlkaq..ldaaqaelean..krkaaleeeraakvae 231
                 g+  + ++ +e +++++++ a+ ++l+++    + q++lea   +r+a ++e +++++ae
  MMETSP1325-20131115|3342_1  56 GDSDNPDEREENRKERNRRHARETRLRKKnyMHSLQQQLEAMtqERNALEKEINDKMNAE 115
                 222233333334444444446666666664445566666655533333333333444443 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   6.8     0.003       3.8     133     205 ..      33     104 ..       8     129 .. 0.48

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.003
   PF02724.9 133 eesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsnesslakslrrrrrrereekeevl 205
                 +     +d + d+e +++s++    ++++ de +++++e+++  +r+ + ++++  ++ +++ +++ ++++ l
  MMETSP1325-20131115|3342_1  33 KGRGAAGDAKTDNETNSTSSDA-GGDSDNPDEREENRKERNRRHARETRLRKKNYMHSLQQQLEAMTQERNAL 104
                 2233333333333333333322.33333344444444444444444444444442222333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1579  (0.115492); expected 273.4 (0.02)
Passed bias filter:                      845  (0.0618051); expected 273.4 (0.02)
Passed Vit filter:                       124  (0.00906963); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.65u 0.41s 00:00:01.06 Elapsed: 00:00:00.62
# Mc/sec: 707.31
//
Query:       MMETSP1325-20131115|3345_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-12   47.7   0.0    2.1e-12   47.0   0.0    1.4  1  PF00622.23 SPRY domain


Domain annotation for each model (and alignments):
>> PF00622.23  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.0   0.0   1.6e-16   2.1e-12      43     125 ..       1      87 [.       1      88 [. 0.87

  Alignments for each domain:
  == domain 1    score: 47.0 bits;  conditional E-value: 1.6e-16
                 --EEEECTTEEEE--S.S-EEE--SS--SEE-EEE-S---...-EEEEECTCT.-EEEE-S----..--EE--EE------S-EEEE-- CS
  PF00622.23  43 wgldlskgskyhavts.eetgeklqeegdviGvllDlegg...eisFtkngkhlgiyafrnvefg..eklfPavslkagnairlnlgqr 125
                 +g+++++g  +ha+    +t e+++  gdv+G++ D++++    i+Ftkng+ lg + f+nv+++   +l+P+v l a  ++++n+g++
  MMETSP1325-20131115|3345_1   1 YGYHSDDGGVFHASGHsVDTREPFGV-GDVVGCGMDFSKPdgaDIFFTKNGRFLG-TFFSNVQAShgHALYPTVGLDAALTLKINFGDE 87 
                 678888877777665569********.**********998888************.778877666559******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 687.65
//
Query:       MMETSP1325-20131115|3343_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1249.53
//
Query:       MMETSP1325-20131115|3346_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-10   38.4   7.3    1.2e-09   37.6   5.1    1.3  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    8.6e-10   38.1   8.3    1.5e-09   37.3   5.8    1.4  1  PF13639.1  Ring finger domain
    6.8e-09   35.1   8.0    1.3e-08   34.2   5.5    1.5  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    9.7e-08   31.4   6.4    1.7e-07   30.6   4.5    1.4  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
     0.0028   17.4   0.8      0.004   16.9   0.6    1.2  1  PF14282.1  FlxA-like protein
     0.0056   16.3   2.5     0.0083   15.8   1.7    1.2  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
     0.0073   15.7   2.9      0.011   15.2   1.2    1.9  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
     0.0079   16.0   0.7     0.0079   16.0   0.5    1.9  1  PF14369.1  zinc-finger
     0.0083   13.7  10.4       0.01   13.4   7.2    1.1  1  PF01576.14 Myosin tail
  ------ inclusion threshold ------
      0.013   15.4   5.9      0.046   13.7   4.1    2.0  1  PF12678.2  RING-H2 zinc finger
        0.1   12.1   9.0       0.15   11.5   6.2    1.2  1  PF03962.10 Mnd1 family
       0.12   12.1   5.5       0.51   10.0   3.8    2.1  1  PF12773.2  Double zinc ribbon
       0.12   11.7   2.0       0.15   11.4   1.4    1.1  1  PF01988.14 VIT family
       0.16   10.7   4.2       0.19   10.5   2.9    1.1  1  PF14362.1  Domain of unknown function (DUF4407)
       0.17   11.2   3.7       0.31   10.4   2.6    1.4  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
       0.19   11.2  12.7       0.24   10.8   8.8    1.1  1  PF00769.14 Ezrin/radixin/moesin family
       0.26   10.9   1.4       0.32   10.5   1.0    1.1  1  PF05203.11 Hom_end-associated Hint
       0.34   10.5   2.7       0.41   10.2   1.8    1.4  1  PF05290.6  Baculovirus immediate-early protein (IE-0)
       0.41   10.0   8.7       0.17   11.3   4.4    1.6  1  PF02891.15 MIZ/SP-RING zinc finger
       0.49   10.4   9.4        4.3    7.4   0.0    2.5  2  PF10367.4  Vacuolar sorting protein 39 domain 2
       0.53    9.9  12.6        1.5    8.5   8.8    1.6  1  PF14073.1  Centrosome localisation domain of Cep57
       0.74    9.5   4.6       0.62    9.7   1.8    1.9  1  PF05883.6  Baculovirus U-box/Ring-like domain
       0.87    7.2   3.1        1.1    6.9   2.1    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
       0.96    8.9   7.9        5.6    6.4   5.4    2.3  1  PF14447.1  Prokaryotic RING finger family 4
        2.1    8.1  10.6        1.7    8.4   2.9    2.9  2  PF01485.16 IBR domain
        2.8    7.6  10.4        5.8    6.5   0.0    2.9  3  PF14446.1  Prokaryotic RING finger family 1
        3.1    7.1   6.5        6.2    6.1   4.5    1.5  1  PF06810.6  Phage minor structural protein GP20
        3.4    7.4   7.8        9.7    5.9   1.0    2.2  2  PF12647.2  RNHCP domain
        5.4    6.8   9.6        1.7    8.4   3.4    2.2  2  PF08772.6  Nin one binding (NOB1) Zn-ribbon like
        8.1    6.0   8.1         20    4.7   0.1    3.3  3  PF13719.1  zinc-ribbon domain


Domain annotation for each model (and alignments):
>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   5.1   2.7e-12   1.2e-09       4      46 .]     104     147 ..     102     147 .. 0.85

  Alignments for each domain:
  == domain 1    score: 37.6 bits;  conditional E-value: 2.7e-12
   PF13923.1   4 sCpiCleelenpviltpCgHlyCkkCieqwlekskkk...CPiCrn 46 
                  C iCl++    ++ t+CgHl+C++Ci+++ +   k+   CP C++
  MMETSP1325-20131115|3346_1 104 RCAICLDDIHHLAV-TKCGHLFCYDCIKRVTDGV-KTrsfCPSCKK 147
                 7**********955.**************99985.33355****95 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   5.8   3.3e-12   1.5e-09       3      45 ..     105     147 ..     103     148 .. 0.89

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 3.3e-12
   PF13639.1   3 CaiCldelsegeevvrlpCgHvfHeeCldewl...rssnsCPlCrk 45 
                 CaiCld++   +++ +++CgH+f+++C+++     ++++ CP C+k
  MMETSP1325-20131115|3346_1 105 CAICLDDI---HHLAVTKCGHLFCYDCIKRVTdgvKTRSFCPSCKK 147
                 ********...79*****************964448899*****97 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   5.5   2.8e-11   1.3e-08       1      41 []     105     145 ..     105     145 .. 0.93

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 2.8e-11
                 -TTTSSS-SSEE.BSCTS-EE-CHHHHHHHCS.T-----TTT CS
  PF00097.20   1 CpiCleeakepnelleCkHsfCskCirkilks.rkkvkCPlC 41 
                 C+iCl+ +     +++C+H fC++Ci+++++  ++   CP C
  MMETSP1325-20131115|3346_1 105 CAICLDDIHHLA-VTKCGHLFCYDCIKRVTDGvKTRSFCPSC 145
                 ************.******************9666666**** PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   4.5   3.8e-10   1.7e-07       4      45 ..     104     147 ..     101     150 .. 0.94

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 3.8e-10
   PF13920.1   4 tCvvClereadvlllpCgHlclCeeCaerllk...rkkkCpiCrs 45 
                  C +Cl+     ++++CgHl +C++C +r+ +   ++  Cp C++
  MMETSP1325-20131115|3346_1 104 RCAICLDDIHHLAVTKCGHL-FCYDCIKRVTDgvkTRSFCPSCKK 147
                 7*******************.*********98999999*****97 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.6   8.7e-06     0.004       8      79 ..      19      89 ..      12     101 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 8.7e-06
   PF14282.1  8 tsssassgssdsqiksLqkqiqsltkqlkelssdeeltaeekqkqqqliqq.QIqalqaQiaqlqsqqseeaq 79
                 ss a+s++  ++ ksLq+q+  ++  ++el++ e++ +e+k ++ + + + +++al+  ++    q +  ++
  MMETSP1325-20131115|3346_1 19 GSSGAASDE-RTKRKSLQQQLRRAKRRIEELEE-EAKAEERKRARTEVVHArEVDALKEKLRGETCQRKLAQE 89
                455554444.7889*******************.777778888888877643788888888766655555444 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.7   1.8e-05    0.0083      31      80 ..      98     148 ..      72     150 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.8e-05
   PF12861.2  31 fdGtcpsckfpGddc.plvlGkckhnfhlhcilkwletetskglcpmcrqt 80 
                        c +  dd   l + kc h f   ci +  +  ++++ cp c++ 
  MMETSP1325-20131115|3346_1  98 SSRIALRCAICLDDIhHLAVTKCGHLFCYDCIKRVTDGVKTRSFCPSCKKR 148
                 5555667777777762588999**************************975 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   1.2   2.4e-05     0.011      13      57 ..     105     143 ..      93     144 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 2.4e-05
                 -TTT-S.-SS....EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
   PF13445.1  13 Cpiske.qsteqnpPvvLpCGhvisrealeklakggrsnkgrfkCP 57 
                 C i+ +          v  CGh ++ +++++ + g    k+r  CP
  MMETSP1325-20131115|3346_1 105 CAICLDdIHH----LAVTKCGHLFCYDCIKRVTDG---VKTRSFCP 143
                 8888877755....66788************9983...34566666 PP

>> PF14369.1  zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.5   1.7e-05    0.0079       3      28 ..     123     146 ..     121     148 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.7e-05
   PF14369.1   3 yWChqCrrfvrispsedddvlCPhCg 28 
                 ++C++C ++v+ + +  + ++CP+C+
  MMETSP1325-20131115|3346_1 123 LFCYDCIKRVTDGVK--TRSFCPSCK 146
                 7**********5443..3357****7 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   7.2   2.3e-05      0.01      26      85 ..      23      79 ..      17      98 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.3e-05
  PF01576.14 26 kledeqalvaqlqkkikelearieeleeeleaeraaRakaekeradlsreleelserLee 85
                 + de + +++lq+++++ + rieeleee  ae   Ra+ e   a   re+++l+e+L  
  MMETSP1325-20131115|3346_1 23 AASDERTKRKSLQQQLRRAKRRIEELEEEAKAEERKRARTEVVHA---REVDALKEKLRG 79
                567899999********************************9875...9********964 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.1    0.0001     0.046      40      75 .]     109     146 ..      61     146 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 0.0001
   PF12678.2  40 gksde.cpvawgeCgHaFHlhCiskWl...ktrktCPlcr 75 
                    d+   +a+ +CgH F  +Ci++     ktr+ CP c+
  MMETSP1325-20131115|3346_1 109 L--DDiHHLAVTKCGHLFCYDCIKRVTdgvKTRSFCPSCK 146
                 3..3325678899**********99985557888****96 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   6.2   0.00033      0.15      63     137 ..      23     101 ..      20     107 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00033
  PF03962.10  63 akkklkteleklkkeleelkqrikelqaeiekekkkreet.....eereelleelkeleeelkklkkeleklakldpekv 137
                 a++  +t+ + l+++l ++k+ri+el++e ++e++kr  t     +e  +l e+l+    ++k  +++l  + k d++++
  MMETSP1325-20131115|3346_1  23 AASDERTKRKSLQQQLRRAKRRIEELEEEAKAEERKRARTevvhaREVDALKEKLRGETCQRKLAQEQLG-AHKVDSSRI 101
                 566789999************************9999999887544444455555555555555555555.777777766 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.8    0.0011      0.51      11      42 ..     121     152 ..      80     154 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0011
   PF12773.2  11 garfCpqCgaklkeataeevlCpsCgesvspk 42 
                 g  fC+ C +++    +++ +CpsC++++ p+
  MMETSP1325-20131115|3346_1 121 GHLFCYDCIKRVTDGVKTRSFCPSCKKRLGPG 152
                 567**********5566679******988776 PP

>> PF01988.14  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.4   0.00033      0.15      48     131 ..      19     101 ..       8     108 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00033
  PF01988.14  48 malGeylsvkaerdleeaelereqqeverspegeveeladilkakglseetaaqvaeeltakeda.ldfllkeelgleeestsrp 131
                    G+   +++ r+  +++l+r ++++e+  e+ ++e ++  +++ +   +++ + e+l+   ++ ++ l++e+lg++++++sr 
  MMETSP1325-20131115|3346_1  19 GSSGAASDERTKRKSLQQQLRRAKRRIEELEEEAKAEERKRARTEVVHAREVDALKEKLRG--ETcQRKLAQEQLGAHKVDSSRI 101
                 33566778999999999*****************************************998..5569***********9777765 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.9   0.00041      0.19     179     227 ..      19      67 ..       3     103 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00041
   PF14362.1 179 GkGpvykekkealdaaqaeletlkaqldaaqaeleankrkaaleeeraa 227
                 G   ++   +++++++q++l+++k+++++ ++e++a++rk a +e  +a
  MMETSP1325-20131115|3346_1  19 GSSGAASDERTKRKSLQQQLRRAKRRIEELEEEAKAEERKRARTEVVHA 67 
                 3334444445555555566666666666666666655444444433333 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.6   0.00067      0.31       4      56 ..      95     145 ..      93     146 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00067
                 XXXXXXXX-B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT--.B------- CS
   PF11789.3   4 aveeerislkCpltlkpfkePvtskkCnHvFEkeaIlkmlkrkkk.vkCPvaGC 56 
                 +v+++ri l+C + l+ +++ +  +kC H F  + I +  + +k+   CP   C
  MMETSP1325-20131115|3346_1  95 KVDSSRIALRCAICLDDIHH-LAVTKCGHLFCYDCIKRVTDGVKTrSFCPS--C 145
                 5899**************98.8999***********999965554156997..6 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   8.8   0.00053      0.24      22      82 ..      32      93 ..      25     104 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00053
  PF00769.14 22 rkaqkeleeseekaeeleeklkqeeeeaqklek.kakeleeekerLeeeaaksekekeeLek 82
                +  q++l+++++++eelee++k ee+++ ++e+ +a+e+ + ke+L+ e+ + +  +e+L +
  MMETSP1325-20131115|3346_1 32 KSLQQQLRRAKRRIEELEEEAKAEERKRARTEVvHAREVDALKEKLRGETCQRKLAQEQLGA 93
                56699**************************963799*****************99999965 PP

>> PF05203.11  Hom_end-associated Hint
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.0   0.00071      0.32      99     161 ..      28      84 ..      14      98 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00071
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05203.11  99 raieivkevtksfekekegeeeakeiakefasvsaseeyieveieardfaalspevrkasrql 161
                 r      ++ ks +++ + +++  e  +e+a++ ++++  +  + ar+++al++++r  + q 
  MMETSP1325-20131115|3346_1  28 R------TKRKSLQQQLRRAKRRIEELEEEAKAEERKRARTEVVHAREVDALKEKLRGETCQR 84 
                 3......556777777756666666666677788888989999**************999775 PP

>> PF05290.6  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.8    0.0009      0.41      68     129 ..      90     147 ..      43     158 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0009
   PF05290.6  68 rvqvlnvflekklyecnicedtsaeerflkPneccGykicnlcyanlwkfstvyPvcPvckt 129
                 ++   +v + +   +c ic d   + ++l     cG+  c+ c  ++ +  +    cP ck 
  MMETSP1325-20131115|3346_1  90 QLGAHKVDSSRIALRCAICLD---DIHHLAVT-KCGHLFCYDCIKRVTDGVKTRSFCPSCKK 147
                 555555666666789****88...55777655.48*************************96 PP

>> PF02891.15  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.4   0.00036      0.17       2      49 ..     102     147 ..     101     148 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00036
  PF02891.15   2 slkCplslsrisiPvrgekCkHiqCfdlksflesnertktWnCPvCsk 49 
                  l+C ++l+ i++ +  +kC H+ C+d+   ++   +t++  CP C+k
  MMETSP1325-20131115|3346_1 102 ALRCAICLDDIHH-LAVTKCGHLFCYDCIKRVTDGVKTRSF-CPSCKK 147
                 699********98.5579**********9999999988775.****97 PP

>> PF10367.4  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   4.5      0.14        65      38     109 .]      59     131 ..      27     131 .. 0.70
   2 ?    7.4   0.0    0.0095       4.3      75      90 ..     136     151 ..     134     158 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.14
   PF10367.4  38 rasvekkresqvvknllkaeklqveeellkersrkvkiteekv...CavCkkrlgesvfvvyPdgtvvHlgCakr 109
                 ra++e  + ++v +   k +    +++l++e+  + k++++++   Ca+C   +    ++v++ g++ ++ C+kr
  MMETSP1325-20131115|3346_1  59 RARTEVVHAREVDALKEKLRGETCQRKLAQEQLGAHKVDSSRIalrCAICLDDI--HHLAVTKCGHLFCYDCIKR 131
                 44444444444444444555555566666999999999*999844566666666..56888999********985 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0095
   PF10367.4  75 iteekvCavCkkrlge 90 
                 ++ ++ C++Ckkrlg 
  MMETSP1325-20131115|3346_1 136 VKTRSFCPSCKKRLGP 151
                 567899********95 PP

>> PF14073.1  Centrosome localisation domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   8.8    0.0033       1.5     108     163 ..      31      90 ..      23     103 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0033
   PF14073.1 108 kendqsdvkaqleklevLEkeys....rLtrtqslaetKikqLEeKLqeEeqqRklvqdk 163
                 +++ q++++   +++e LE+e +    + +rt+ +  + +  L eKL+ E++qRkl q++
  MMETSP1325-20131115|3346_1  31 RKSLQQQLRRAKRRIEELEEEAKaeerKRARTEVVHAREVDALKEKLRGETCQRKLAQEQ 90 
                 3455667777778889998865322228899999999*********************97 PP

>> PF05883.6  Baculovirus U-box/Ring-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.8    0.0014      0.62      24      65 ..     100     132 ..      80     141 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0014
   PF05883.6  24 evsveCaiCldeieenkGvvavtekgtldleklfhkeClkrf 65 
                 ++ + CaiCld+i++    +avt+ g     +lf+ +C+kr 
  MMETSP1325-20131115|3346_1 100 RIALRCAICLDDIHH----LAVTKCG-----HLFCYDCIKRV 132
                 57789**********....9999887.....78******997 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   2.1    0.0023       1.1     223     274 ..      30      81 ..      21      97 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0023
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14 223 teeersellskvnkriedlktvleeteselekvlakiadellaweeqvskek 274
                 + +  +++l+ +++rie+l+++ +  e+++ ++ +  a e+ a++e+++ e 
  MMETSP1325-20131115|3346_1  30 KRKSLQQQLRRAKRRIEELEEEAKAEERKRARTEVVHAREVDALKEKLRGET 81 
                 4556789999*************************************99876 PP

>> PF14447.1  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.4     0.012       5.6      13      53 ..     108     153 ..      96     155 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.012
   PF14447.1  13 cgtvgtkrvllpCgHlvpdetF....dl.erYsgCPfCgtrletds 53 
                 c     + ++  CgHl ++++     d+ +  s CP C++rl +++
  MMETSP1325-20131115|3346_1 108 CLDDIHHLAVTKCGHLFCYDCIkrvtDGvKTRSFCPSCKKRLGPGD 153
                 55555667899**********7333344155789999999998775 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.9    0.0038       1.7      25      57 ..      81     131 ..      53     138 .. 0.69
   2 ?    2.6   0.2      0.24   1.1e+02      48      57 ..     139     148 ..     135     154 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0038
  PF01485.16  25 dCeaiiekekgakks..................svtCskCgfefCflCkke 57 
                  C++ +  e+  +++                  +   +kCg+ fC++C k+
  MMETSP1325-20131115|3346_1  81 TCQRKLAQEQLGAHKvdssrialrcaiclddihHLAVTKCGHLFCYDCIKR 131
                 566666666666666666667666444444444333345*********876 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.24
  PF01485.16  48 fefCflCkke 57 
                 ++fC +Ckk+
  MMETSP1325-20131115|3346_1 139 RSFCPSCKKR 148
                 6899999985 PP

>> PF14446.1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       2.6   1.2e+03       4      18 ..      75      89 ..      72      92 .. 0.73
   2 ?    3.4   3.2      0.12        54       5      39 ..     102     132 ..      98     137 .. 0.82
   3 ?    6.5   0.0     0.013       5.8       3      19 ..     137     153 ..     135     157 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 2.6
   PF14446.1  4 tktrCavCgkklkdk 18
                +k r + C++kl+++
  MMETSP1325-20131115|3346_1 75 EKLRGETCQRKLAQE 89
                667778999999755 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.12
   PF14446.1   5 ktrCavCgkklkdkddivvCpeCgapyHreCweea 39 
                 + rCa+C + +    ++v  ++Cg  ++ +C ++ 
  MMETSP1325-20131115|3346_1 102 ALRCAICLDDI--HHLAV--TKCGHLFCYDCIKRV 132
                 679********..56666..7**********9876 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.013
   PF14446.1   3 dtktrCavCgkklkdkd 19 
                 +t+  C+ C+k+l+++d
  MMETSP1325-20131115|3346_1 137 KTRSFCPSCKKRLGPGD 153
                 68999********9887 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   4.5     0.014       6.2      23      82 ..      25      90 ..      20      99 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.014
   PF06810.6 23 dkaeeeldslkeqlkerdkqiedLkkkvkdneeLkk........kieklkeknkkkkeeyeaklkdlk 82
                ++  ++++sl++ql  +   ie+L++++k +e   +        +++ lkek     e+ + kl++++
  MMETSP1325-20131115|3346_1 25 SDERTKRKSLQQQLRRAKRRIEELEEEAKAEERKRArtevvharEVDALKEKLR--GETCQRKLAQEQ 90
                456789********************9998876554111111114445555554..555555555555 PP

>> PF12647.2  RNHCP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.4     0.032        15      30      75 ..      63     109 ..      42     119 .. 0.80
   2 ?    5.9   1.0     0.021       9.7       7      31 ..     124     145 ..     116     157 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.032
   PF12647.2  30 eCLsslhvd.evpgdraseCggemepisvavrkkkewalvhrCkkCg 75 
                 e ++++ vd  ++  r ++C+ +++   + ++k  + ++  rC  C 
  MMETSP1325-20131115|3346_1  63 EVVHAREVDaLKEKLRGETCQRKLAQEQLGAHKVDSSRIALRCAICL 109
                 5667888886667779999*****999999***9***********96 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.021
   PF12647.2   7 eCkeCglevsaeaagsaarnHCPeC 31 
                  C  C ++v   + g ++r  CP+C
  MMETSP1325-20131115|3346_1 124 FCYDCIKRV---TDGVKTRSFCPSC 145
                 466776666...569999******* PP

>> PF08772.6  Nin one binding (NOB1) Zn-ribbon like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   3.0       4.1   1.9e+03       8      30 ..     101     128 ..      97     128 .. 0.73
   2 ?    8.4   3.4    0.0037       1.7      10      32 ..     123     147 ..     116     149 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 4.1
   PF08772.6   8 yvlrChaCfkltk.....dmtkqFCpkC 30 
                   lrC  C++ ++     +    FC  C
  MMETSP1325-20131115|3346_1 101 IALRCAICLDDIHhlavtKCGHLFCYDC 128
                 5799****98776555556677788887 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0037
   PF08772.6  10 lrChaCfkltk..dmtkqFCpkCGn 32 
                 l C+ C+k ++   +t++FCp+C +
  MMETSP1325-20131115|3346_1 123 LFCYDCIKRVTdgVKTRSFCPSCKK 147
                 67*****9999555899******86 PP

>> PF13719.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.044        20       4      31 ..      81     108 ..      81     113 .. 0.90
   2 ?    1.3   0.2       0.5   2.3e+02      29      35 ..     118     124 ..     118     126 .. 0.88
   3 ?    3.1   0.2      0.14        62       5      11 ..     142     148 ..     141     150 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.044
   PF13719.1   4 eCpnCkakyeiddekippkgrkvrCskC 31 
                 +C++  a+ ++ + k+  ++  +rC+ C
  MMETSP1325-20131115|3346_1  81 TCQRKLAQEQLGAHKVDSSRIALRCAIC 108
                 688889999999999999********99 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.5
   PF13719.1  29 skCghvf 35 
                 +kCgh+f
  MMETSP1325-20131115|3346_1 118 TKCGHLF 124
                 69***99 PP

  == domain 3    score: 3.1 bits;  conditional E-value: 0.14
   PF13719.1   5 CpnCkak 11 
                 Cp+Ck++
  MMETSP1325-20131115|3346_1 142 CPSCKKR 148
                 9***986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1896  (0.138678); expected 273.4 (0.02)
Passed bias filter:                     1121  (0.0819924); expected 273.4 (0.02)
Passed Vit filter:                       208  (0.0152136); expected 13.7 (0.001)
Passed Fwd filter:                        38  (0.0027794); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.73u 0.46s 00:00:01.19 Elapsed: 00:00:00.66
# Mc/sec: 591.83
//
Query:       MMETSP1325-20131115|3344_1  [L=352]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1146  (0.0838209); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:00.52
# Mc/sec: 1622.15
//
Query:       MMETSP1325-20131115|3349_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   13.9   0.4      0.045   13.5   0.2    1.3  1  PF11825.3 Nuclear/hormone receptor activator site AF-1


Domain annotation for each model (and alignments):
>> PF11825.3  Nuclear/hormone receptor activator site AF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   3.3e-06     0.045      32      66 ..      29      64 ..       1      70 [. 0.71

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.3e-06
   PF11825.3 32 slt.stlssplnglgsPysvissslGspsvslpstp 66
                ++  + l+spl gl sP + + s++  +  s   +p
  MMETSP1325-20131115|3349_1 29 KMGvTGLGSPLKGLSSPLKGMKSPMKGNFLSPTKSP 64
                333689*******************98887766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|3351_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|3348_1  [L=543]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00042   20.3   1.1    0.00042   20.3   0.7    4.3  5  PF04706.7  Dickkopf N-terminal cysteine-rich region
  ------ inclusion threshold ------
        7.9    6.2   7.3       0.47   10.1   0.2    2.5  3  PF13998.1  MgrB protein


Domain annotation for each model (and alignments):
>> PF04706.7  Dickkopf N-terminal cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.7      0.25   1.7e+03      39      51 ..     156     168 ..     154     169 .. 0.77
   2 ?   -3.8   0.2         2   1.4e+04       5      11 ..     190     196 ..     189     197 .. 0.78
   3 ?   -7.3   8.5         2   1.4e+04       8      45 ..     212     252 ..     210     262 .. 0.64
   4 !   20.3   0.7   6.1e-08   0.00042       1      45 [.     325     376 ..     325     380 .. 0.92
   5 ?   -3.0   0.4       1.1   7.8e+03      42      50 ..     503     511 ..     496     513 .. 0.78

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.25
   PF04706.7  39 CCpgnlCvngvCi 51 
                 C   ++Cv+  C 
  MMETSP1325-20131115|3348_1 156 CLIHDTCVWKNCH 168
                 555679*****96 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 2
   PF04706.7   5 DedCead 11 
                 D+dC+++
  MMETSP1325-20131115|3348_1 190 DKDCGDE 196
                 9999875 PP

  == domain 3    score: -7.3 bits;  conditional E-value: 2
   PF04706.7   8 CeadeyClsssee....svClaCrkrrkrCtrdamCCpgnlC 45 
                 Ce+++ C s + +      Cl+     + C+++  C  g +C
  MMETSP1325-20131115|3348_1 212 CEENSDCVSGRCGwlhgRHCLPKLALDEYCHQHEDCDSG-RC 252
                 444444444444444447788888888888888887666.34 PP

  == domain 4    score: 20.3 bits;  conditional E-value: 6.1e-08
   PF04706.7   1 eCisDedCeadeyClsssee........svClaCrkrrkrCtrdamCCpgnlC 45 
                 +Ci  edC+ d +C+  s +         +C + +  ++ Ctrda C  g +C
  MMETSP1325-20131115|3348_1 325 RCIWHEDCAPDAWCSLFSVGfgglwvdyLSCKPLKPLKEVCTRDAQCASG-RC 376
                 59****************9999***99999*****************999.55 PP

  == domain 5    score: -3.0 bits;  conditional E-value: 1.1
   PF04706.7  42 gnlCvngvC 50 
                   lC++ +C
  MMETSP1325-20131115|3348_1 503 QRLCKWPMC 511
                 468999888 PP

>> PF13998.1  MgrB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.2   6.9e-05      0.47       4      22 ..     235     253 ..     234     257 .. 0.92
   2 ?   -3.3   0.1       1.1   7.3e+03      10      26 ..     365     381 ..     362     382 .. 0.76
   3 ?   -1.0   0.1      0.21   1.4e+03       9      14 ..     510     515 ..     509     516 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 6.9e-05
   PF13998.1   4 laLdsmCDQGeqFfsGICs 22 
                 laLd +C Q e+ +sG C+
  MMETSP1325-20131115|3348_1 235 LALDEYCHQHEDCDSGRCA 253
                 8***************997 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 1.1
   PF13998.1  10 CDQGeqFfsGICsitrf 26 
                 C  + q +sG C+ + f
  MMETSP1325-20131115|3348_1 365 CTRDAQCASGRCAGNPF 381
                 77788889999987766 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.21
   PF13998.1   9 mCDQGe 14 
                 mCD Ge
  MMETSP1325-20131115|3348_1 510 MCDDGE 515
                 9***98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.35s 00:00:01.19 Elapsed: 00:00:00.53
# Mc/sec: 2455.14
//
Query:       MMETSP1325-20131115|3355_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.72
# Mc/sec: 426.02
//
Query:       MMETSP1325-20131115|3356_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      4e-05   23.9   0.1    5.1e-05   23.6   0.1    1.2  1  PF13640.1 2OG-Fe(II) oxygenase superfamily
    4.7e-05   22.8   0.6    6.4e-05   22.3   0.4    1.3  1  PF13661.1 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.1   7.4e-09   5.1e-05      11      50 ..       2      56 ..       1      61 [] 0.87

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 7.4e-09
   PF13640.1 11 flspHvDnse..................sssrrltlllylndpeweeeGGelelypsd 50
                +++pH+D+ +                  +   rlt+l+ylnd+    eGG + +++++
  MMETSP1325-20131115|3356_1  2 YYRPHIDGAWpasglndegeyeydtshgKTMSRLTFLIYLNDDF---EGGWTTFFTPN 56
                799****999**************99999999*********666...99999888754 PP

>> PF13661.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.4   9.4e-09   6.4e-05      23      67 ..       2      57 ..       1      60 [. 0.84

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 9.4e-09
   PF13661.1 23 ffdpHiDadpsql...............gkprflsallYLNedwdadfdGgtlffddrdg 67
                ++ pHiD     +               +++++l++l+YLN    +df+Gg + f+ +++
  MMETSP1325-20131115|3356_1  2 YYRPHIDGAWPASglndegeyeydtshgKTMSRLTFLIYLN----DDFEGGWTTFFTPNT 57
                57899997666666999999999****9*************....999999777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 270.70
//
Query:       MMETSP1325-20131115|3353_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-10   39.0   0.4      0.018   14.6   0.1    3.2  3  PF13418.1  Galactose oxidase, central domain
    4.2e-06   26.6   0.1       0.62   10.1   0.1    3.2  3  PF13415.1  Galactose oxidase, central domain
    0.00025   20.8   0.0        2.2    8.2   0.0    3.1  3  PF13854.1  Kelch motif
    0.00085   19.1   0.1        1.4    9.0   0.0    3.4  3  PF07646.10 Kelch motif
     0.0015   18.5   0.7        6.4    7.0   0.2    3.5  3  PF13964.1  Kelch motif
  ------ inclusion threshold ------
      0.014   14.8   0.3        6.9    6.1   0.1    3.1  3  PF01344.20 Kelch motif


Domain annotation for each model (and alignments):
>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00013      0.29      15      45 ..       3      37 ..       1      46 [. 0.88
   2 !   10.4   0.0   0.00017      0.38      13      44 ..      58      89 ..      49      99 .. 0.83
   3 !   14.6   0.1   8.1e-06     0.018       6      36 ..     109     139 ..     106     141 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00013
   PF13418.1 15 lylfGGenedg....gplnDlyvfDlstntWtrlp 45
                l+++GGe+e g     + +++ ++Dl++  W+ ++
  MMETSP1325-20131115|3353_1  3 LIVIGGEDETGasslVAPGEIEILDLESQMWRVVA 37
                89***************************999884 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00017
   PF13418.1 13 grlylfGGenedggplnDlyvfDlstn..tWtrl 44
                g+++++ Gen  g ++n ly +Dl+    tW+ +
  MMETSP1325-20131115|3353_1 58 GKVLVISGENA-G-VFNRLYMLDLTPPspTWSCV 89
                89999******.5.**********7643389755 PP

  == domain 3    score: 14.6 bits;  conditional E-value: 8.1e-06
   PF13418.1   6 savavpdgrlylfGGenedggplnDlyvfDl 36 
                 sav + +g++++fGGe++ g  ++ l  +D+
  MMETSP1325-20131115|3353_1 109 SAVDCIGGSVLVFGGESSTGMMHDSLLALDV 139
                 66666679***********999999999997 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00052       1.2       3      39 ..       2      44 ..       1      54 [. 0.74
   2 !   10.1   0.1   0.00027      0.62       2      36 ..      58      96 ..      57     106 .. 0.78
   3 ?    3.8   0.0     0.026        60       1      11 [.     115     125 ..     115     141 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00052
   PF13415.1  3 elyvfGGlgddgqtrl...ndvyvldldtntweei...gslPp 39
                el+v+GG++++g+  l   ++  +ldl++  w+ +   g+ P 
  MMETSP1325-20131115|3353_1  2 ELIVIGGEDETGASSLvapGEIEILDLESQMWRVVattGEGPE 44
                699******9666666777***********9996632355554 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00027
   PF13415.1  2 delyvfGGlgddgqtrlndvyvldl..dtntweei.....gs 36
                ++++v+ G++   +   n++y+ldl   ++tw  +     g+
  MMETSP1325-20131115|3353_1 58 GKVLVISGEN---AGVFNRLYMLDLtpPSPTWSCVrvdwrGD 96
                6899******...99**********88888998443355544 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.026
   PF13415.1   1 gdelyvfGGlg 11 
                 g++++vfGG+ 
  MMETSP1325-20131115|3353_1 115 GGSVLVFGGES 125
                 688******98 PP

>> PF13854.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0       0.1   2.3e+02      16      39 ..       2      28 ..       1      30 [. 0.57
   2 !    7.1   0.0    0.0021       4.8      15      39 ..      58      79 ..      48      80 .. 0.85
   3 !    8.2   0.0   0.00095       2.2       2      27 ..     101     127 ..     100     140 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.1
   PF13854.1 16 niylyGGksgnddsvs.....ddvyvLsl 39
                +++++GG +  +++ s      ++ +L+l
  MMETSP1325-20131115|3353_1  2 ELIVIGGED--ETGASslvapGEIEILDL 28
                6899***99..444431233345556666 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0021
   PF13854.1 15 gniylyGGksgnddsvsddvyvLsl 39
                g++++++G +    +v++ +y+L+l
  MMETSP1325-20131115|3353_1 58 GKVLVISGEN---AGVFNRLYMLDL 79
                79********...8**********8 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.00095
   PF13854.1   2 PppRarhcavvv..sgniylyGGksgnd 27 
                 P  R++  ++v+  +g+++++GG s+ +
  MMETSP1325-20131115|3353_1 101 PGIRTHYNSAVDciGGSVLVFGGESS-T 127
                 677777777776689*********96.3 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.014        32      22      46 ..      13      37 ..       2      40 .. 0.72
   2 ?    1.6   0.0      0.13   3.1e+02      12      37 ..      58      79 ..      54      91 .. 0.79
   3 !    9.0   0.0   0.00062       1.4       3      26 ..     107     131 ..     105     145 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.014
  PF07646.10 22 tdngllsssdlnvldpeknvWeelt 46
                +   l +++ + +ld+e++ W+ + 
  MMETSP1325-20131115|3353_1 13 GASSLVAPGEIEILDLESQMWRVVA 37
                44667788999**********9775 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.13
  PF07646.10 12 gkiyvvGGahtdngllsssdlnvldp 37
                gk++v+ G     ++ ++++l+ ld+
  MMETSP1325-20131115|3353_1 58 GKVLVISGE----NAGVFNRLYMLDL 79
                899999999....8888888877775 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.00062
  PF07646.10   3 yghsavvpggkiyvvGGa.htdngl 26 
                 y  ++ ++gg ++v+GG   t+++ 
  MMETSP1325-20131115|3353_1 107 YNSAVDCIGGSVLVFGGEsSTGMMH 131
                 778899***********96444444 PP

>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.074   1.7e+02      16      44 ..       5      37 ..       2      43 .. 0.72
   2 !    5.4   0.1    0.0085        19      12      40 ..      58      86 ..      49     107 .. 0.81
   3 !    7.0   0.2    0.0028       6.4       3      23 ..     107     127 ..     103     140 .. 0.73

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.074
   PF13964.1 16 ifGGytns....gkylndvlvydpetksWeqlp 44
                ++GG + +      +  +++++d+e+  W+ ++
  MMETSP1325-20131115|3353_1  5 VIGGEDETgassLVAPGEIEILDLESQMWRVVA 37
                556655555555555578999********9876 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0085
   PF13964.1 12 gkiyifGGytnsgkylndvlvyd..petksW 40
                gk+ +++G +++   +n+++ +d  p + +W
  MMETSP1325-20131115|3353_1 58 GKVLVISGENAG--VFNRLYMLDltPPSPTW 86
                6899******95..99999999955446666 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.0028
   PF13964.1   3 aghsavsvggkiyifGGytns 23 
                 ++ ++  +gg++ +fGG + +
  MMETSP1325-20131115|3353_1 107 YNSAVDCIGGSVLVFGGESST 127
                 3444588**********9864 PP

>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0076        17      14      44 ..       3      37 ..       1      40 [. 0.83
   2 ?   -0.3   0.0       0.3   6.8e+02      25      43 ..      69      89 ..      54      90 .. 0.75
   3 ?    6.1   0.1     0.003       6.9       4      29 ..     108     133 ..     106     141 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0076
                EEEE---BS....TTS-TTEEEEEETTTTEEEEEC CS
  PF01344.20 14 iYviGGrdg....dtnalnsVerYDpvtntWeklp 44
                + viGG d+    +  a   +e++D++++ W+ ++
  MMETSP1325-20131115|3353_1  3 LIVIGGEDEtgasSLVAPGEIEILDLESQMWRVVA 37
                789******88888888888899999988888876 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.3
                S-TTEEEEEETT..TTEEEEE CS
  PF01344.20 25 nalnsVerYDpv..tntWekl 43
                 + n  +++D++  + tW+ +
  MMETSP1325-20131115|3353_1 69 GVFNRLYMLDLTppSPTWSCV 89
                678999999999889999865 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.003
                 CEEEEEETTEEEEE---BSTTS-TTE CS
  PF01344.20   4 sagvvvldgkiYviGGrdgdtnalns 29 
                 + +v +++g + v+GG ++++   +s
  MMETSP1325-20131115|3353_1 108 NSAVDCIGGSVLVFGGESSTGMMHDS 133
                 78999***********9886655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 836.38
//
Query:       MMETSP1325-20131115|3357_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   18.1   0.0     0.0058   17.1   0.0    1.5  1  PF00630.14 Filamin/ABP280 repeat
  ------ inclusion threshold ------
       0.01   15.6   0.1      0.018   14.9   0.0    1.4  1  PF01833.19 IPT/TIG domain


Domain annotation for each model (and alignments):
>> PF00630.14  Filamin/ABP280 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   8.4e-07    0.0058       3      59 ..     163     220 ..     161     236 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 8.4e-07
                 -TTT-EEE-----EEETT.S-EEEEEE-BC----B-------EEEEEE----...... CS
  PF00630.14   3 daskckvsGpGlenavvg.epatFtvdardakgekvesggdefqvritspsgaeekkl 59 
                  as++ ++Gp l +++++ + at  + a+d+ g ++  g def + +t+ +++e++++
  MMETSP1325-20131115|3357_1 163 AASQVLAFGPALLQGCAAgDYATLVIRAKDEHGVDRWCGMDEFSIMVTDVEDEENRRK 220
                 6899********7775555****************************88888876643 PP

>> PF01833.19  IPT/TIG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   2.6e-06     0.018       2      61 ..      69     131 ..      67     165 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 2.6e-06
  PF01833.19   2 tissisPnsgsssgGttititGsnF....gtdsedssvtiggtectvtvsvsstsivcttPpgs 61 
                 +i +i+P+ g + g t+++i+G ++    g  s  +s+  g++e+  +  +s t++++ t   +
  MMETSP1325-20131115|3357_1  69 SIHDIEPKIGAVTGDTRMVIYGMGLnkmnGEASVLMSCPKGSEEVSAN-VTSATEVEFSTADFT 131
                 5999************************98888888888888888888.888888888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 1183.20
//
Query:       MMETSP1325-20131115|3350_1  [L=514]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0035   16.9   0.1      0.011   15.3   0.1    1.9  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   7.9e-07     0.011      14      48 ..     465     505 ..     448     512 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 7.9e-07
                 HHHHHHHHHHHHHHT-TTT--SCC.......HHHHHHHHHHH CS
  PF00226.26  14 deeIkkaYrklalkyHPDknkdde.......eeaeekfkein 48 
                  +++kka +k a+ yHPDk  +++       +  ee +k in
  MMETSP1325-20131115|3350_1 465 NADMKKALLKAAVHYHPDKPVNKSsgmewyvM-CEEIVKLIN 505
                 6799***************6555566666632.455555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       619  (0.045275); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.34s 00:00:01.21 Elapsed: 00:00:00.50
# Mc/sec: 2463.45
//
Query:       MMETSP1325-20131115|3358_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.039   13.5   0.3      0.042   13.4   0.2    1.1  1  PF02461.11 Ammonia monooxygenase
        0.1   11.4   0.7        0.1   11.4   0.5    2.0  2  PF02163.17 Peptidase family M50


Domain annotation for each model (and alignments):
>> PF02461.11  Ammonia monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   6.2e-06     0.042      52     102 ..      11      65 ..       8      99 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6.2e-06
                 GG--TTHHHHHHHHHHSHHHHHHHHHHHHHH--....----HHHH-------HHH CS
  PF02461.11  52 dwkdrrlwvtvvpivsvtfaaavqaflwekfrl....pfgatlvvlglllgewin 102
                  w +r lw  v  +v v f   v af   +f l     +ga+++v+ ll  e + 
  MMETSP1325-20131115|3358_1  11 GWSNRTLWGKVQQVVDVWFMLGVVAFALAQFALmvllVHGAATAVVRLLSSETVR 65 
                 699*********************999999986222268**********999775 PP

>> PF02163.17  Peptidase family M50
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.2     0.019   1.3e+02      97     113 ..      34      50 ..      13      83 .. 0.66
   2 ?   11.4   0.5   1.5e-05       0.1       3      20 ..      91     108 .]      89     108 .] 0.89

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.019
                 XXXXXXXXXXXXXXXXX CS
                 xxxxxxxxxxxxxxxxx RF
  PF02163.17  97 aNfllavllfalllllg 113
                 + f+la +++++ll+ g
  MMETSP1325-20131115|3358_1  34 VAFALAQFALMVLLVHG 50 
                 22444444444444444 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 1.5e-05
                 XXXXXXXXXXXXXXXXXX CS
                 xxxxxxxxxxxxxxxxxx RF
  PF02163.17   3 ilalgilvlvHElgHllv 20 
                  +al++++++HE+gH+l+
  MMETSP1325-20131115|3358_1  91 TAALLVSLAFHEFGHALA 108
                 689************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       548  (0.0400819); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 488.31
//
Query:       MMETSP1325-20131115|3360_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.71
# Mc/sec: 259.89
//
Query:       MMETSP1325-20131115|3362_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-14   54.3   0.0    1.1e-14   54.1   0.0    1.0  1  PF05176.9 ATP10 protein


Domain annotation for each model (and alignments):
>> PF05176.9  ATP10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   0.0   8.4e-19   1.1e-14     179     253 ..       9      81 ..       2      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 54.1 bits;  conditional E-value: 8.4e-19
   PF05176.9 179 lfksnlrkkvpeerherY..fivkkgqltyelreklgilNllvGYvylvDengriRWagsGsAteeelesLwkcvra 253
                  +   l+++++e+rh +   fi++    t+ + + l+++N+lvG v+lvD  gr+RW g+G+A e e+ +L + +  
  MMETSP1325-20131115|3362_1   9 SMITGLKQSIDEKRHGTAlvFIGD----TDAVCDGLHVTNKLVGHVFLVDGAGRVRWHGCGDASEGEVAALIELTDE 81 
                 346778999******998435555....899****************************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 412.17
//
Query:       MMETSP1325-20131115|3363_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 257.72
//
Query:       MMETSP1325-20131115|3364_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 527.20
//
Query:       MMETSP1325-20131115|3366_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-20   71.7   8.6      8e-13   48.4   0.4    2.0  2  PF08238.7  Sel1 repeat
  ------ inclusion threshold ------
       0.11   11.9   1.6       0.33   10.4   1.1    1.9  1  PF13414.1  TPR repeat
       0.29   10.9   1.8          1    9.2   1.2    1.9  1  PF13424.1  Tetratricopeptide repeat
       0.66    9.7   3.0        6.1    6.6   2.1    2.1  1  PF04212.13 MIT (microtubule interacting and transport) domain
        2.2    8.3   9.0        2.2    8.2   0.1    3.3  4  PF07719.12 Tetratricopeptide repeat
        2.3    7.8   9.2        3.2    7.4   0.1    3.4  4  PF00515.23 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   1.4   1.2e-09   2.8e-06       4      39 .]       2      36 ..       2      36 .. 0.89
   2 !   48.4   0.4   3.5e-16     8e-13       2      39 .]      38      72 ..      37      72 .. 0.95

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 1.2e-09
   PF08238.7  4 qynLGlyymylnGlgG.vpkdpekAleWyekAAeqGh 39
                q +LG  y y +G +G  +k+  +++++y+ AAeqGh
  MMETSP1325-20131115|3366_1  2 QAYLG--YVYATGHNGmAKKNETEGIRYYREAAEQGH 36
                779**..889****774666****************9 PP

  == domain 2    score: 48.4 bits;  conditional E-value: 3.5e-16
   PF08238.7  2 eAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                +Aq+nLG   my++G+ Gvp d+++Al++y++ A+qGh
  MMETSP1325-20131115|3366_1 38 QAQCNLG--IMYQHGQ-GVPVDYQEALKLYRRGAKQGH 72
                7******..8889***.9*******************9 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.1   0.00015      0.33      16      63 ..      18      66 ..       3      70 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00015
   PF13414.1 16 egdydeAieayekAleldpnnaelyynlAlaylklgk....dyeeAledyek 63
                +++  e i++y++A e    + ++ +nl+  y++ g+    dy+eAl+ y++
  MMETSP1325-20131115|3366_1 18 KKNETEGIRYYREAAEQG--HGQAQCNLGIMYQH-GQgvpvDYQEALKLYRR 66
                566667789999999987..799999******99.98777889999999876 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.2   0.00044         1      24      73 ..      24      68 ..       7      72 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00044
   PF13424.1 24 Alelyekalellrelgddhpdtaralnnlanlyla.lg...dydeAleylekAl 73
                 + +y++a e     g  h     a  nl++ y++ +g   dy+eAl+++++  
  MMETSP1325-20131115|3366_1 24 GIRYYREAAEQ----G--H---GQAQCNLGIMYQHgQGvpvDYQEALKLYRRGA 68
                55566666533....3..3...45678999999995559999999999999865 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   2.1    0.0027       6.1      19      32 ..      38      68 ..      17      70 .. 0.68

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0027
                T.................-HHHHHHHHHHHH CS
  PF04212.13 19 g.................kyeeAlelYkeAl 32
                +                 +y+eAl+lY+ ++
  MMETSP1325-20131115|3366_1 38 QaqcnlgimyqhgqgvpvDYQEALKLYRRGA 68
                3445555555555666669*********997 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       1.1   2.5e+03       6      12 ..       4      10 ..       2      15 .. 0.81
   2 ?    4.2   0.1     0.019        43      13      29 ..      17      33 ..      16      35 .. 0.81
   3 ?   -0.6   0.0      0.66   1.5e+03       3      12 ..      39      48 ..      37      50 .. 0.77
   4 ?    8.2   0.1   0.00098       2.2      16      28 ..      56      68 ..      56      70 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 1.1
                HHHHHHH CS
  PF07719.12  6 nlGlayy 12
                +lG++y+
  MMETSP1325-20131115|3366_1  4 YLGYVYA 10
                7899986 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.019
                HTT-HHHHHHHHHHHHH CS
  PF07719.12 13 klgdyeeAleafekAle 29
                ++++  e ++++++A e
  MMETSP1325-20131115|3366_1 17 AKKNETEGIRYYREAAE 33
                567778999******87 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.66
                HHHHHHHHHH CS
  PF07719.12  3 alynlGlayy 12
                a +nlG  y 
  MMETSP1325-20131115|3366_1 39 AQCNLGIMYQ 48
                6789999886 PP

  == domain 4    score: 8.2 bits;  conditional E-value: 0.00098
                -HHHHHHHHHHHH CS
  PF07719.12 16 dyeeAleafekAl 28
                dy+eAl+++++  
  MMETSP1325-20131115|3366_1 56 DYQEALKLYRRGA 68
                799******9865 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       3.2   7.2e+03       7      11 ..       5       9 ..       3      10 .. 0.74
   2 ?    1.6   0.1     0.092   2.1e+02      19      29 ..      23      33 ..      16      34 .. 0.75
   3 ?    3.9   0.0     0.018        40       2      12 ..      38      48 ..      37      49 .. 0.86
   4 ?    7.4   0.1    0.0014       3.2      16      26 ..      56      66 ..      55      70 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 3.2
                HHHHH CS
  PF00515.23  7 lGnay 11
                lG++y
  MMETSP1325-20131115|3366_1  5 LGYVY 9 
                88888 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.092
                HHHHHHHHHHH CS
  PF00515.23 19 eAleyyekALe 29
                e + yy++A e
  MMETSP1325-20131115|3366_1 23 EGIRYYREAAE 33
                6699***9965 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.018
                HHHHHHHHHHH CS
  PF00515.23  2 kalynlGnayl 12
                +a +nlG +y+
  MMETSP1325-20131115|3366_1 38 QAQCNLGIMYQ 48
                588******97 PP

  == domain 4    score: 7.4 bits;  conditional E-value: 0.0014
                -HHHHHHHHHH CS
  PF00515.23 16 kydeAleyyek 26
                +y+eAl+ y++
  MMETSP1325-20131115|3366_1 56 DYQEALKLYRR 66
                67888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 301.61
//
Query:       MMETSP1325-20131115|3367_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 568.03
//
Query:       MMETSP1325-20131115|3369_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0045   16.0   0.0     0.0059   15.6   0.0    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   4.3e-07    0.0059     231     272 .]      22      70 ..      18      70 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 4.3e-07
                 ---EEEEEE..SS-TT-EEEEETTEEEEE-HHHHTTC.....EEEEEEE CS
                 xxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxx RF
  PF00443.24 231 sGHYvayvk..nneknkWlkfdDetvtevkeeevlke.....saYvlfY 272
                 +G Yv + +   ++ ++W++fdD+ v++++  e  +       aY+l+Y
  MMETSP1325-20131115|3369_1  22 KGTYVDIEQmaAERWGRWFRFDDSAVRPISVRELDQAfsgnqCAYMLLY 70 
                 6677766556567889**************6655555577999*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 569.70
//
Query:       MMETSP1325-20131115|3370_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0063   15.5   0.1     0.0068   15.4   0.0    1.0  1  PF01545.16 Cation efflux family
  ------ inclusion threshold ------
      0.042   13.4   0.3      0.078   12.6   0.2    1.6  1  PF04972.12 BON domain


Domain annotation for each model (and alignments):
>> PF01545.16  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   9.9e-07    0.0068     218     283 ..      28      91 ..       4      93 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 9.9e-07
  PF01545.16 218 dgvlsvhdlhvwkvgsskilveihievdpslsvseahevaeeiekalkerfpgiadvtiqlepvse 283
                 ++ ls  d++++++g+ k+ v++ ++v+++ ++  a +vae+++    ++++g+ +v +ql+ + +
  MMETSP1325-20131115|3370_1  28 PHLLSFGDVRARRMGN-KWDVDMWVTVHEETDMPTALHVAEKVRAVT-RTIAGVNEVSVQLKVDQQ 91 
                 6778999*********.**************************9877.7889********999876 PP

>> PF04972.12  BON domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   1.1e-05     0.078      40      63 ..      66      89 ..      52      90 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.1e-05
  PF04972.12 40 kekAeeiArnvkGVkkVvNelkvk 63
                +ek+ +++r+++GV +V  +lkv 
  MMETSP1325-20131115|3370_1 66 AEKVRAVTRTIAGVNEVSVQLKVD 89
                899*******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 501.46
//
Query:       MMETSP1325-20131115|3372_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 440.93
//
Query:       MMETSP1325-20131115|3373_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-20   71.1   7.4    6.3e-20   70.7   5.1    1.1  1  PF02575.11 YbaB/EbfC DNA-binding family
  ------ inclusion threshold ------
       0.13   12.2   5.0       0.64    9.9   0.8    2.2  2  PF09361.5  Phasin protein
          3    8.1   6.6        5.1    7.4   4.5    1.3  1  PF07361.6  Cytochrome b562


Domain annotation for each model (and alignments):
>> PF02575.11  YbaB/EbfC DNA-binding family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.7   5.1   1.4e-23   6.3e-20       1      93 []      70     161 ..      70     161 .. 0.98

  Alignments for each domain:
  == domain 1    score: 70.7 bits;  conditional E-value: 1.4e-23
  PF02575.11   1 mkqaqkmqekmeeaqeelaekevegesggglVkVtvnGkgevksveidpelldpedkemledlivaAindAlkkaeelakeemskltgglnlp 93 
                 +k++q++q+k +e+qe +a  +++g s++g+VkV+++G++   +v+i++el+d e +e ++  +++A++dA +k+++ a+e+++++ +gl++p
  MMETSP1325-20131115|3373_1  70 FKKVQEIQKKTKELQEAMAVARIDGASASGAVKVVMSGEQIPIEVDISKELMD-EGAEKVSAEVTEAVKDATAKSSAFAQEKLAEIYKGLEIP 161
                 699*************************************************9.***********************************9987 PP

>> PF09361.5  Phasin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.012        53      74      91 ..      65      82 ..      62      93 .. 0.75
   2 ?    9.9   0.8   0.00014      0.64      21      50 ..     120     149 ..     116     153 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.012
   PF09361.5 74 kavayarklaeiasktqa 91
                +++++ +k++ei +kt++
  MMETSP1325-20131115|3373_1 65 NMMEQFKKVQEIQKKTKE 82
                799999999999999986 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00014
   PF09361.5  21 tafkgaeklaelnleaakasleeslaaakk 50 
                 ++ +gaek++++  ea+k ++++s+a+a++
  MMETSP1325-20131115|3373_1 120 LMDEGAEKVSAEVTEAVKDATAKSSAFAQE 149
                 6779************************97 PP

>> PF07361.6  Cytochrome b562
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.5    0.0011       5.1       7      91 ..      73     154 ..      62     156 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0011
   PF07361.6   7 MkqmklnykqaakaddaeelkealnklrsaaedakkkkppkleedseemkdYqeGldklideidkaealakagkleeAkqalkel 91 
                  ++++++ k++++a+ ++ +  a ++    ++ + ++ p ++      ++  +eG +k+ +e+++a + a a   + A+++l+e+
  MMETSP1325-20131115|3373_1  73 VQEIQKKTKELQEAMAVARIDGASASGAVKVVMSGEQIPIEVDI---SKELMDEGAEKVSAEVTEAVKDATAKSSAFAQEKLAEI 154
                 68899999999999999999999999999999999999999999...556678*******************9999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       926  (0.0677297); expected 273.4 (0.02)
Passed bias filter:                      670  (0.0490053); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.44s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 783.42
//
Query:       MMETSP1325-20131115|3375_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 528.18
//
Query:       MMETSP1325-20131115|3374_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       555  (0.0405939); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|3377_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-05   24.1   1.0      2e-05   24.0   0.7    1.0  1  PF11833.3  Protein of unknown function (DUF3353)
  ------ inclusion threshold ------
      0.016   14.7   0.2      0.018   14.6   0.1    1.2  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF11833.3  Protein of unknown function (DUF3353)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.7   2.9e-09     2e-05       2      53 ..      14      65 ..      13      75 .. 0.90

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 2.9e-09
   PF11833.3  2 edAsfeeiqsArnrllaeyagDeqarakiEaAYDaiLMqrLkeRqeGkikvk 53
                +dA  eei++  ++l  +ya+D++++ kiE A D+i   rL++  +G+++++
  MMETSP1325-20131115|3377_1 14 PDADYEEIKAKAAALAIKYAKDPKRKIKIEVACDKIVELRLRQAAKGQLQMS 65
                79******999999999*********************99999999998765 PP

>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   2.7e-06     0.018       1      31 [.       5      35 ..       5      62 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2.7e-06
                HHHHHTT--TT--HHHHHHHHHHHHHHT-TT CS
  PF00226.26  1 dyYeiLgvpkdasdeeIkkaYrklalkyHPD 31
                d+Y   gv +da+ eeIk +   la+ky  D
  MMETSP1325-20131115|3377_1  5 DLYRMIGVAPDADYEEIKAKAAALAIKYAKD 35
                79************************99655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|3371_1  [L=506]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-83  280.3   0.0    2.6e-83  279.8   0.0    1.2  1  PF03223.10 V-ATPase subunit C
  ------ inclusion threshold ------
      0.095   12.4   0.0       0.18   11.5   0.0    1.3  1  PF04273.8  Putative phosphatase (DUF442)


Domain annotation for each model (and alignments):
>> PF03223.10  V-ATPase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.8   0.0   3.8e-87   2.6e-83       2     348 ..      11     416 ..      10     429 .. 0.93

  Alignments for each domain:
  == domain 1    score: 279.8 bits;  conditional E-value: 3.8e-87
                 EEEEEETT---TT-.--HHHHHHHT------EEEE------B---GGGHHHHHHHHHHHHHH-------HHHHH---.-SS-SSS--S--BTTB-HHHHHHT----TTTS-TTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TTTS--TTT--G.......GGS--S-SSEEEEEEEEEGGGHHHHHHHGGGSSTT...................................B-TT--EEEEE-SSEEEEEEEEE...................GGGHHHHHHHHHHTT-EEE-----HH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEE-TT-HHHHHHHHHHH------------ CS
  PF03223.10   2 wlisapgdktdqqt.iydkmnnltskqsnlsnnykfhipdLkvgtLDqLvglsddLgKldtyveqilrkvanylgevledqrdklhenlmannselpqyltrFqWdmakypikqslreivdiiskeiaqidtdlktksqaYnnlkanlqnlekkktgsLltrnLadlvkk.......edfvldseyLttllviVpkvsandflknYekltdm...................................vvPrSakliaedaeyaLfnVtlF...................kkvaeefklkarekkfivrdfvynee.elaaeknemtkletdkkkqfgpLvrllkvnfseafialihvkaLrvFvEsvLRYGlPvnfqailiepnkksvkklrdvlnqlygeldgasagga 348
                 w+i +p++ ++  + + +k+ +  ++ +nl +  ++ +p+L vgtLD+L++lsd+LgK+d+ +e ++rk+++++ +v    ++ +   l++  ++ + +l++FqWd akyp +++l e+v+ i   ++++++dlk+ s + ++  ++l++l++kk g+L++  L+++++k        +f+ d++yL+t++v++ k+ + dfl++Ye++ +                                    vvP+Sa ++  + e++L++V+++                     + ++fk +arek+fivr+f+y+ + +  + +++++ le++ ++q+g++vr++k++f eaf a++hvk++r FvEsvLRYGlP+nf   +++ n +++k + + l  +++ +d a+++g+
  MMETSP1325-20131115|3371_1  11 WMITLPNEGNNLAEdTFAKLREY-TELENLAEAKQLVVPKLLVGTLDSLMSLSDELGKYDNAIEVVVRKIERQYSDV-VGVKEAVMDPLKVGPVPPKRFLEEFQWDIAKYPNRRPLPELVQLILGGVGSVEEDLKNLSINLSEKTQQLSALNRKKGGNLAMAPLEEVLTKeviegsgAKFL-DTDYLRTVVVVINKAAEPDFLESYESIGNDiagyggpdwvshggcgeadgnfgaeidrqretgspVVPGSAIRVLAEGEHVLYTVVILkgqyeaghiegdefkqgnfVDFFDNFKASAREKRFIVREFEYDPSaKTVSTQDQVEDLEAQVQQQKGSMVRWCKTHFGEAFSAWVHVKVIRAFVESVLRYGLPPNFVLAVLKLNPNKEKLVMQALDRVMQ-VDAAAFMGD 416
                 9999**99999888444444444.5999*************************************************.888889999***********************************************************************************99999966666.***************************9988***********************************************************************999999999*******************986156788999***********************************************************************98875.444455444 PP

>> PF04273.8  Putative phosphatase (DUF442)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.6e-05      0.18      59      95 ..     316     352 ..     304     361 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.6e-05
   PF04273.8  59 aylfvPvisgeiteddveafqralaeaegpvlayCrs 95 
                 ++++ P  ++  t+d+ve++++ +++ +g+++ +C++
  MMETSP1325-20131115|3371_1 316 EFEYDPSAKTVSTQDQVEDLEAQVQQQKGSMVRWCKT 352
                 588999999**************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.37s 00:00:01.26 Elapsed: 00:00:00.59
# Mc/sec: 2055.18
//
Query:       MMETSP1325-20131115|3379_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-24   86.1   0.0    1.8e-24   86.0   0.0    1.0  1  PF00285.16 Citrate synthase


Domain annotation for each model (and alignments):
>> PF00285.16  Citrate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.0   0.0   1.3e-28   1.8e-24     162     219 ..       7      64 .]       3      64 .] 0.96

  Alignments for each domain:
  == domain 1    score: 86.0 bits;  conditional E-value: 1.3e-28
                 --..-TTHHHHHHHHHHHS--SS-HHHHHHHHHHTTT--HHHHH-------------- CS
  PF00285.16 162 eepseeeaealdlalilhaDHglnaSTftarvvaStlsdlysavsaaigaLkGplHGg 219
                  ep +e+++a+dl+lilhaDH++naST+t+r+++S+ +d++++++a+i++L+Gp HGg
  MMETSP1325-20131115|3379_1   7 YEPPKEFVDAMDLLLILHADHEQNASTSTVRIAGSSDADPFACIAAGIASLWGPSHGG 64 
                 57899****************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 278.85
//
Query:       MMETSP1325-20131115|3376_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.43s 00:00:00.90 Elapsed: 00:00:00.91
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|3382_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.42s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|3383_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-27   93.7   0.2      5e-27   93.2   0.1    1.2  1  PF00886.14 Ribosomal protein S16


Domain annotation for each model (and alignments):
>> PF00886.14  Ribosomal protein S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.2   0.1   3.7e-31     5e-27       1      62 []      31      92 ..      31      92 .. 0.99

  Alignments for each domain:
  == domain 1    score: 93.2 bits;  conditional E-value: 3.7e-31
  PF00886.14  1 RlGrkkrPfYriVvadsrkpRdgrpieklGtYdPiprkkeakrlelneerikyWlkkGAqps 62
                R+Grk+ P+YriV+ad+r pRdg+ ie++G YdP prk+  k+++l+ +rikyWl++GAqps
  MMETSP1325-20131115|3383_1 31 RFGRKHAPTYRIVAADARCPRDGKHIEQVGSYDPKPRKDGTKEIRLKADRIKYWLSVGAQPS 92
                9*************************************999********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 861.67
//
Query:       MMETSP1325-20131115|3386_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        86  (0.00629023); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 243.84
//
Query:       MMETSP1325-20131115|3385_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   14.8   0.4      0.034   13.9   0.3    1.6  1  PF13345.1 Domain of unknown function (DUF4098)


Domain annotation for each model (and alignments):
>> PF13345.1  Domain of unknown function (DUF4098)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.3   2.5e-06     0.034      21      53 ..      68     101 ..      53     121 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.5e-06
   PF13345.1  21 ltgedldvktgsGditlenltg.ndvsvstgsGd 53 
                   g+dl+ ++g+Gdi l++++g + v+ s+ +G+
  MMETSP1325-20131115|3385_1  68 AAGSDLEGQAGTGDILLKMVSGdVVVDCSSKNGN 101
                 568899****************877777888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 734.54
//
Query:       MMETSP1325-20131115|3390_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 354.85
//
Query:       MMETSP1325-20131115|3390_2  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|3389_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 894.97
//
Query:       MMETSP1325-20131115|3392_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|3388_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-07   29.3   0.0    1.2e-06   28.4   0.0    1.5  1  PF00498.21 FHA domain
    0.00055   19.9   0.1     0.0012   18.8   0.0    1.6  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)
    0.00087   19.0   1.9      0.015   15.0   0.1    2.8  3  PF13180.1  PDZ domain


Domain annotation for each model (and alignments):
>> PF00498.21  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   2.6e-10   1.2e-06      14      68 .]     283     347 ..     263     347 .. 0.78

  Alignments for each domain:
  == domain 1    score: 28.4 bits;  conditional E-value: 2.6e-10
                 -...........TTTS-TTCEEEEEEETCEEEEEEECST--EEETTEECSTTSEEEE-TTEEEEEC CS
  PF00498.21  14 d...........dpsiSrkHalikydeggkfyleDlgSknGtfvNgqrigkgepvrLksgdvielG 68 
                 d           + si r+Ha+i+   +g+++l D+ S  G+ vN+++i++ +  rL +g+vi++G
  MMETSP1325-20131115|3388_1 283 DeeiasrdediaEISICRQHAVIQHAYDGSLWLFDM-SARGVKVNDTQIKPRQFERLLDGSVIQFG 347
                 36666666655578999******999999******8.9***************************9 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   2.7e-07    0.0012      24      67 ..      61     104 ..      41     117 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 2.7e-07
                 SSSEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTSHHHHHHH CS
  PF00595.19  24 dkgifvsevvpggaaeagglkeGDkIlsvNgvdvenvshdeavq 67 
                  +g+++++vvpg  ae+ g+++G kI+ vNg +v++ s  eav+
  MMETSP1325-20131115|3388_1  61 RTGLIITRVVPGKQAEVLGVQAGWKIVTVNGITVSDGSGVEAVH 104
                 589*****************************999987777776 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1     0.032   1.4e+02      34      51 ..      24      41 ..      19      50 .. 0.84
   2 !   15.0   0.1   3.3e-06     0.015      12      64 ..      56     113 ..      45     119 .. 0.86
   3 ?   -2.0   0.0      0.69   3.1e+03      40      74 ..     324     359 ..     323     364 .. 0.61

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.032
   PF13180.1 34 pGDiilkvdgkkvksltd 51
                ++D+++ vd+++++s  d
  MMETSP1325-20131115|3388_1 24 ANDEVMTVDETQIDSPLD 41
                58***********98765 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 3.3e-06
   PF13180.1  12 n....trgvlvvsVkessPaakaglkpGDiilkvdgkkvksltdlkslll.kkkpGdt 64 
                 +    ++g+ ++ V ++  a+  g+++G +i+ v+g++v++++ ++ +    +++Gdt
  MMETSP1325-20131115|3388_1  56 PlgwvRTGLIITRVVPGKQAEVLGVQAGWKIVTVNGITVSDGSGVEAVHKrATEAGDT 113
                 36666789***********************************999999888888887 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 0.69
   PF13180.1  40 kvdgkkvksltdlkslll..kkkpGdtvkltvlRdgk 74 
                 kv+++++ + +++++ll+    + G + ++ v+++g+
  MMETSP1325-20131115|3388_1 324 KVNDTQI-KPRQFERLLDgsVIQFGRSARVYVVHQGT 359
                 7888888.56666666663223556666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       732  (0.0535401); expected 273.4 (0.02)
Passed bias filter:                      545  (0.0398625); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.46s 00:00:01.26 Elapsed: 00:00:00.63
# Mc/sec: 1517.69
//
Query:       MMETSP1325-20131115|3393_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|3393_2  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00023   20.7   0.0    0.00034   20.1   0.0    1.3  1  PF07719.12 Tetratricopeptide repeat
    0.00025   20.5   0.0    0.00036   19.9   0.0    1.2  1  PF13414.1  TPR repeat
     0.0071   16.1   0.0     0.0095   15.7   0.0    1.2  1  PF13424.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.066   12.7   0.0      0.089   12.3   0.0    1.2  1  PF00515.23 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0     1e-07   0.00034       3      34 .]      46      77 ..      44      77 .. 0.95

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1e-07
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldPnn 34
                 ++nlG + ++ ++ e+Al+ +e  l+ldP++
  MMETSP1325-20131115|3393_2 46 MWHNLGIISRYDDQSERALDEYEHTLALDPDD 77
                6*****************************97 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.1e-07   0.00036       3      41 ..      44      82 ..      42      83 .. 0.94

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.1e-07
   PF13414.1  3 AealkelGnalfkegdydeAieayekAleldpnnaelyy 41
                A+ + +lG    +  + + A+++ye+ l+ldp++ e+ y
  MMETSP1325-20131115|3393_2 44 AHMWHNLGIISRYDDQSERALDEYEHTLALDPDDSECRY 82
                88899*******************************987 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.8e-06    0.0095      41      76 ..      39      74 ..      30      78 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.8e-06
   PF13424.1 41 dhpdtaralnnlanlylalgdydeAleylekAleia 76
                ++  +a  ++nl+++ ++  + + Al+ +e  l+++
  MMETSP1325-20131115|3393_2 39 ANELVAHMWHNLGIISRYDDQSERALDEYEHTLALD 74
                556677777777777777777777777777777765 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.6e-05     0.089       4      34 .]      47      77 ..      44      77 .. 0.95

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.6e-05
                HHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  4 lynlGnaylklgkydeAleyyekALelnPnn 34
                + nlG + ++  + + Al+ ye  L l+P++
  MMETSP1325-20131115|3393_2 47 WHNLGIISRYDDQSERALDEYEHTLALDPDD 77
                99***************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 391.71
//
Query:       MMETSP1325-20131115|3391_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-36  126.2   0.0    1.5e-36  125.7   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
    2.1e-36  125.3   0.0    3.7e-36  124.4   0.0    1.4  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.7   0.0   2.2e-40   1.5e-36      49     258 ..       5     224 ..       1     225 [. 0.90

  Alignments for each domain:
  == domain 1    score: 125.7 bits;  conditional E-value: 2.2e-40
                 HHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTT..EEEST-SGGGEEEET.............TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS-....--TTSBHHHHHHHHHHT-SSGGGS--HHHHHHH CS
  PF07714.12  49 leeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskk..lvHrdLaarNvLlee.............ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrle....kpekcpeelyelmkqCweeepeeRptfkelvek 258
                 ++e++++++l+h ni+ + gv t  +p li++e+++gG+L++ L+ +   +l  +   +++ +ia G+ yL+++   +vHrdL++ NvLl+              + + k+sDfGL+r++   + y  ++ ++ ++ + apE++k    + +sDv+s  +ll+E+ft ++ p++g  +++v+ ++ +eg+r +    ++++cp++l ++++q w++ep+eRp++  l++ 
  MMETSP1325-20131115|3391_1   5 VREVQALCRLRHMNIIAFFGVTTYPDP-LILLELMSGGSLHDALHPN---RLMPSVCWRISKDIAAGLLYLHTRAppMVHRDLTSSNVLLTApvaelalrevtdnTAFAKLSDFGLTRST---EFY--MTACTGNLYFSAPETFKGDPHSPASDVYSLAILLYEVFT-SKVPFEGEGAQRVAFQVsQEGRRPSvddlEQSDCPPSLVSVITQLWAQEPSERPSLPMLQQV 224
                 78*********************7666.999**************99...999999****************99767**************99**********9777***********99...444..4667788999*****************************.78**********999996677775422224668**********************9988876 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.4   0.0   5.4e-40   3.7e-36      44     254 ..       3     221 ..       1     227 [. 0.86

  Alignments for each domain:
  == domain 1    score: 124.4 bits;  conditional E-value: 5.4e-40
                 HHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHT..CEE-S--SGGGEEEETT--E.............EE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHH CS
  PF00069.20  44 tavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsn..giiHrDLKpeNiLldkkgel.............kiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeei 254
                 ++vrE++ l +l+H ni+ +++v +   + +++le++ gg+l+d+l+  ++l    + +i + i+ gl ylH +    +HrDL ++N+Ll+                  k++DFGl +   +++  +t  +g  ++ APE  + ++ +++++Dv+sl+++lye++t k+pf+ge  ++    + ++ +++   d ++s + +++l ++i++l++++p++R+++  +
  MMETSP1325-20131115|3391_1   3 NHVREVQALCRLRHMNIIAFFGVTT-YPDPLILLELMSGGSLHDALH-PNRLMPSVCWRISKDIAAGLLYLHTRapPMVHRDLTSSNVLLTAPVAElalrevtdntafaKLSDFGLTR---STEFYMTACTGNLYFSAPETFK-GDPHSPASDVYSLAILLYEVFTSKVPFEGEGAQRVAFQVSQEGRRPSVDDLEQS-DCPPSLVSVITQLWAQEPSERPSLPML 221
                 5789*******************95.6677889**************.999**********************8778**************5444479******************96...57778899999***********.*****************************9555555555444444444444433.345*******************97655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       497  (0.0363517); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.38s 00:00:01.06 Elapsed: 00:00:00.60
# Mc/sec: 1429.83
//
Query:       MMETSP1325-20131115|3394_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 972.11
//
Query:       MMETSP1325-20131115|3396_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-39  133.6   0.0    6.4e-39  133.5   0.0    1.0  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
    3.1e-07   30.0   0.0      4e-07   29.6   0.0    1.1  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.046   13.4   0.0      0.079   12.6   0.0    1.3  1  PF02753.12 Gram-negative pili assembly chaperone, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.5   0.0   1.4e-42   6.4e-39       2     156 ..       5     172 ..       4     228 .. 0.92

  Alignments for each domain:
  == domain 1    score: 133.5 bits;  conditional E-value: 1.4e-42
                 ----------THHHHHHHHHHHTSHHHHHHHHTTHCCH....H-TTHHTTTHHHHHHHHHHHHH--HHH-SSS---HHHHHHHHHHBGGGGGCTTS-HHHHHHHHHHHHHHHHHHHCCHHHHSTTS-....................-SCHHHHC-EEEEEEEEETTCEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xx.............xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00443.24   2 gvtGleNlGntCYmnsvlQcLvsipelrdyllryeervaeineeneleeeaqlaraladlfkklvenssekkavsPsefkktlkkineqfsgykQqDahEfllflLdqlhedlnrlnkkektekqkae...ds.............ndslitdlfkgqlksrlkclecknv 156
                 g++Gl NlGntC++ns +QcL+++p l +y+l++   + ++n++n l+++++la+  a+l+ +l+  s++kka++P+ fk+ ++k neqf+g +Q+Da+E+l+flL +l+edlnr+ kk++ e+++++   d+             + s+++ lf gq+ks+l c +c++ 
  MMETSP1325-20131115|3396_1   5 GLVGLHNLGNTCFLNSSVQCLSHTPLLTQYFLSKAYLH-DVNTTNVLGHQGKLAQLYATLVTNLW--SNRKKAYNPRLFKNGIAKMNEQFAGADQHDAQELLAFLLGGLSEDLNRIAKKPYIEQPDSDgrpDReladiwwrnhlrrELSIMVALFTGQYKSELTCATCGYA 172
                 689********************************555.9************************5..9999*******************************************************99765227999*******************************986 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   8.8e-11     4e-07       1     161 [.       7     191 ..       7     220 .. 0.83

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 8.8e-11
   PF13423.1   1 aGlennlnncYlnaLLqllfftldlfeailkhs..e.......cskencllceLgflfnmLdsstkgtpcqasnllralstipeaaalgeqqdvqeanrFileqlslelltlkvdifh................ererdkseaesslselfgtklisqnrciscqaekvkeesllnlelpyppsek 161
                 +Gl n +n+c+ln+  q l  t+ l +  l ++  +         ++ +l+ + + l+ +L  s + +      + + +++++e++a   q d qe+ +F+l  ls +l+   ++ ++                  +++ + + s ++ lf  ++ s+ +c  c++++ + e++ +l lp+p+ +k
  MMETSP1325-20131115|3396_1   7 VGLHNLGNTCFLNSSVQCLSHTPLLTQYFLSKAylHdvnttnvLGHQGKLAQLYATLVTNLW-SNRKKAYNPRLFKNGIAKMNEQFAGADQHDAQELLAFLLGGLSEDLNRIAKKPYIeqpdsdgrpdreladiWWRNHLRRELSIMVALFTGQYKSELTCATCGYASARFEPFSTLTLPLPEDTK 191
                 7***********************99999998877346566665566677777777777777.56666666666777888888999*************************98877778899999999999998667777777888889********************************99555 PP

>> PF02753.12  Gram-negative pili assembly chaperone, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.7e-05     0.079      33      66 ..     176     208 ..     170     210 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.7e-05
  PF02753.12  33 vaPfsevqvklpgkaagakvkwtvINDyGgksee 66 
                 + Pfs+++++lp+ +++ ++++ +I   G++s+ 
  MMETSP1325-20131115|3396_1 176 FEPFSTLTLPLPEDTKR-NITVVMISKSGAVSPL 208
                 79*************99.************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      406  (0.0296957); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1260.48
//
Query:       MMETSP1325-20131115|3378_1  [L=805]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0024   16.8   1.9     0.0024   16.8   1.3    2.8  3  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
        1.3    8.4   4.0         11    5.5   0.4    2.6  2  PF04423.9  Rad50 zinc hook motif


Domain annotation for each model (and alignments):
>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1      0.91   6.2e+03       6      11 ..     115     120 ..     115     126 .. 0.77
   2 !   16.8   1.3   3.5e-07    0.0024       2      29 ..     208     235 ..     207     236 .. 0.93
   3 ?   -0.8   0.1      0.11   7.7e+02       7      13 ..     780     786 ..     779     786 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 0.91
  PF00641.13   6 dCskCl 11 
                 +C +C+
  MMETSP1325-20131115|3378_1 115 TCATCG 120
                 588997 PP

  == domain 2    score: 16.8 bits;  conditional E-value: 3.5e-07
  PF00641.13   2 egdWdCskClvqNfawstkCvaCqapkp 29 
                 ++dW C++C+  N  ++ +C aC + +p
  MMETSP1325-20131115|3378_1 208 AEDWFCPSCTMLNQITTRRCTACRTRRP 235
                 89*********************99887 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.11
  PF00641.13   7 CskClvq 13 
                 C+ C+v+
  MMETSP1325-20131115|3378_1 780 CPGCGVM 786
                 *****97 PP

>> PF04423.9  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.4    0.0016        11      18      40 ..     497     520 ..     488     522 .. 0.79
   2 ?    3.3   0.1    0.0074        50      10      27 ..     767     784 ..     766     785 .. 0.90

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0016
                 T---.--S-------HHHHHHHHH CS
   PF04423.9  18 eakg.cCPvCgreLdeeheqelik 40 
                 + ++ +CP+C   L++ + ++l+ 
  MMETSP1325-20131115|3378_1 497 GIGEiVCPCCPNVLTSHEVCKLTT 520
                 556689**********99999986 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.0074
                 HHHHHHHTT-----S--- CS
   PF04423.9  10 nkaieelkeakgcCPvCg 27 
                 +k +e l++ +  CP Cg
  MMETSP1325-20131115|3378_1 767 KKSAEYLASKTKACPGCG 784
                 688999999999*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (805 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       840  (0.0614394); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.32u 0.34s 00:00:01.66 Elapsed: 00:00:00.69
# Mc/sec: 2795.75
//
Query:       MMETSP1325-20131115|3398_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 681.32
//
Query:       MMETSP1325-20131115|3401_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.039   13.2   0.0      0.052   12.8   0.0    1.2  1  PF04046.11 PSP


Domain annotation for each model (and alignments):
>> PF04046.11  PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.8e-06     0.052       7      27 ..      20      40 ..      17      43 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.8e-06
  PF04046.11  7 deLReALglpendpPpWlyrM 27
                ++LReAL+l+e ++   l+ M
  MMETSP1325-20131115|3401_1 20 ERLREALNLSERQLLILLVVM 40
                89***********99888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|3400_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-29  101.2   5.9    4.9e-29  100.8   4.1    1.2  1  PF02466.14 Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> PF02466.14  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.8   4.1   3.6e-33   4.9e-29      16     127 ..       1     110 [.       1     111 [. 0.94

  Alignments for each domain:
  == domain 1    score: 100.8 bits;  conditional E-value: 3.6e-33
  PF02466.14  16 lGavyGlfmrsmhaatklfrslplkeqlkavlramkqrspssaknfavvgaiYsgiecaleglrgkndllnsvaAGaltGavlarrggpqaaavgaagfaafsaaiealgrm 127
                 +Gav+G +++s+   ++ ++ + ++  +k++l+a+k+r+p+++ nfav+ga+++ ++c ++ lr+k+d++ns+++Ga+tGavla+r+gp+aa  +a+++++++aaie+lg m
  MMETSP1325-20131115|3400_1   1 MGAVGGSIWHSV--KGFRNSPKGWSNSFKGSLEAVKARGPVVGGNFAVWGALFASFDCSFAALRHKEDPWNSIMSGAATGAVLAARAGPKAAGKNALMGGVLLAAIEGLGIM 110
                 8*********99..556666666788**********************************************************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 663.28
//
Query:       MMETSP1325-20131115|3405_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0095   15.2   0.4      0.011   15.0   0.3    1.1  1  PF03006.15 Haemolysin-III related
  ------ inclusion threshold ------
      0.043   13.0   0.0      0.057   12.6   0.0    1.2  1  PF06570.6  Protein of unknown function (DUF1129)
      0.066   12.0   1.6      0.084   11.7   1.1    1.1  1  PF08395.7  7tm Chemosensory receptor
      0.074   11.6   0.1      0.095   11.2   0.1    1.1  1  PF10129.4  OpgC protein
       0.11   11.3   0.4       0.17   10.7   0.3    1.2  1  PF09991.4  Predicted membrane protein (DUF2232)
       0.12   11.8   3.0       0.22   10.9   2.0    1.4  1  PF13967.1  Late exocytosis, associated with Golgi transport


Domain annotation for each model (and alignments):
>> PF03006.15  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.3   4.9e-06     0.011      97     155 ..      30      96 ..      10     117 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4.9e-06
  PF03006.15  97 lyafacapklgllylvliwilavlGilvkllpvfsr.......kef..rvlravlfllmgllgvipil 155
                  y+ ++ +++ +l++v++ +l++ G +v  ++  ++       k+f  r+++a++ +++ ++  + ++
  MMETSP1325-20131115|3405_1  30 DYTAYD-YWFNWLFTVFSPVLCLSGFVVAYIYAERNnqnpaerKSFqdRCVQAMVIFICVMYVFVTAK 96 
                 466667.**************************66689998774445577777777665444444443 PP

>> PF06570.6  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.5e-05     0.057     122     178 ..      52     107 ..      40     116 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.5e-05
   PF06570.6 122 gGlamvyvyriltrs.kkkkkrppiwkrllilllivvvwlvlftlvsllpkviNpvLp 178
                 +G++++y+y     + ++  +r+++  r +  ++i++ ++ +f++++ + +++  +L+
  MMETSP1325-20131115|3405_1  52 SGFVVAYIYAER--NnQNPAERKSFQDRCVQAMVIFICVMYVFVTAKAIEPTFCQRLD 107
                 566666655554..449999*****************************999988886 PP

>> PF08395.7  7tm Chemosensory receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.1   3.7e-05     0.084      26      84 ..      36      94 ..      32      97 .. 0.96

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.7e-05
   PF08395.7 26 rwrrrllllllllilvllvllvlflivlmreeyffrrsallevvynielvlglltvlvi 84
                 w+ +l++ +  +++++++++ ++++++++ + ++r s+  + v++++++++++ v+v+
  MMETSP1325-20131115|3405_1 36 YWFNWLFTVFSPVLCLSGFVVAYIYAERNNQNPAERKSFQDRCVQAMVIFICVMYVFVT 94
                599***************************************************99997 PP

>> PF10129.4  OpgC protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   4.2e-05     0.095      46      95 ..      51      98 ..      48     117 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.2e-05
   PF10129.4 46 lSGlaaglvYgraaaregllaaaarilrRawqlYvahiallvlvlalial 95
                lSG++++++Y+++   ++  a ++++  R++q  v +i+++ ++++  a+
  MMETSP1325-20131115|3405_1 51 LSGFVVAYIYAERN--NQNPAERKSFQDRCVQAMVIFICVMYVFVTAKAI 98
                8**********995..66678999********999999998888876655 PP

>> PF09991.4  Predicted membrane protein (DUF2232)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3   7.4e-05      0.17     200     282 ..       3      93 ..       2      98 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 7.4e-05
   PF09991.4 200 wklPeslvwlliiallll..lllkke.egslltsiglnllvvlslllliqGlavisfylkkkklpkavrv.........lilvllillpfllllv 282
                 +klP++l w++ ++ l +  l++++e   + +++ +  l++v+s++l++ G+ v++ y+++ + + a r          +++++++    ++++v
  MMETSP1325-20131115|3405_1   3 IKLPDWLAWIMPVLSLNFpdLVMSPEcDYTAYDYWFNWLFTVFSPVLCLSGFVVAYIYAERNNQNPAERKsfqdrcvqaMVIFICV----MYVFV 93 
                 6899999999887777542233333314456699999999*******************999666555544666633323333444....44443 PP

>> PF13967.1  Late exocytosis, associated with Golgi transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.0   9.6e-05      0.22      52     146 ..       7      92 ..       3      99 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 9.6e-05
   PF13967.1  52 glfgWipallkisdeevlqsaGLDAyvflrflkmgikiflvlavlallvLlPvnatggedekkkaskegldklsisnveegssrlwahlvfayvf 146
                  +++Wi+++l+++  +++ s   D + +   +  ++ +f+++++l+ +v+  ++a +++++  ++++  +     ++  +  +++++ ++++yvf
  MMETSP1325-20131115|3405_1   7 DWLAWIMPVLSLNFPDLVMSPECDYTAYDYWFNWLFTVFSPVLCLSGFVVAYIYAERNNQNPAERKS--F-----QD--RCVQAMVIFICVMYVF 92 
                 5899***************************************************988887554432..2.....22..2334455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       536  (0.0392042); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.62
# Mc/sec: 514.06
//
Query:       MMETSP1325-20131115|3402_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.6   0.7       0.14   12.3   0.5    1.7  1  PF02697.9 Uncharacterized ACR, COG1753


Domain annotation for each model (and alignments):
>> PF02697.9  Uncharacterized ACR, COG1753
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.5     1e-05      0.14      15      60 ..      21      65 ..      16      72 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1e-05
   PF02697.9 15 lklKkekkSFSevIeeLie.kkgnkkkLkevfGilseeeaeelekev 60
                +  K ++  FSev+e+ +e k+++ ++  + +++ +++ aee++++ 
  MMETSP1325-20131115|3402_1 21 KARK-GRATFSEVVEQVMErKRSSIDRAVKLAAEHKKQ-AEEAARKQ 65
                4556.9*************6555555555555555554.34444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1041  (0.076141); expected 273.4 (0.02)
Passed bias filter:                      515  (0.0376682); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.34s 00:00:01.09 Elapsed: 00:00:00.68
# Mc/sec: 1187.61
//
Query:       MMETSP1325-20131115|3406_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-07   30.9   0.0    6.1e-07   29.5   0.0    1.7  1  PF03171.15 2OG-Fe(II) oxygenase superfamily
    4.2e-06   26.6   0.0      1e-05   25.4   0.0    1.6  2  PF13532.1  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF03171.15  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   8.9e-11   6.1e-07       5      95 ..     197     313 ..     195     315 .. 0.84

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 8.9e-11
                 EEEEEEES....--E-EEEEEEEESS.SCEEEEEEE..................T--EEEEEE-EE..SCECECTSTT.EEEEEEEEHHCCCE---GTT-EEEE----.CSEEEEEEE CS
  PF03171.15   5 lrvnrYpp....pekglglgpHtDne.nriltillq..................ddggglqfrked..kwidvppdpv.allvnfgdvllvltngryksvlHrvlpnt.rgeRislaf 95 
                 l++n+Yp     + + lg++ H D   n+ +t++l+                  d++ gl+++  d       ++ p  ++++  gd +l+lt+ ++ ++lHrv+p   + eR+sl++
  MMETSP1325-20131115|3406_1 197 LTLNHYPTgqgdSVPRLGFPWHRDLTaNGAATMILNlgadgalefgeepqsdtgDKVDGLRYSSSDhaVVDGDEVVPLeRITLTDGD-VLLLTGPARWEYLHRVVPCPgGTERVSLVY 313
                 789*********999**********************7777777777777777777777777777687444555666668*******.668****************98999***987 PP

>> PF13532.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.35   2.4e+03       1      28 [.      35      62 ..      35      89 .. 0.72
   2 !   25.4   0.0   1.5e-09     1e-05     101     184 ..     200     307 ..     154     313 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.35
   PF13532.1  1 glvlipnflsaeeqqellrelleeaplr 28
                gl+++++f++  e++++++ ++++ +  
  MMETSP1325-20131115|3406_1 35 GLHVLRDFITVSERRAAFDAAVALSGRA 62
                7899999999999999999888766544 PP

  == domain 2    score: 25.4 bits;  conditional E-value: 1.5e-09
   PF13532.1 101 nfYre......ga.rmglHqDkeesdleapivSlSLGdsalflfggasred........................eiikilLesGdllvmggesrlay.Hgvprikkgtapelksr 184
                 n+Y++       + +  +H+D +    +a  + l LG+   + fg++ ++d                        +  +i L +Gd+l+++g++r +y H+v +   gt      +
  MMETSP1325-20131115|3406_1 200 NHYPTgqgdsvPRlGFPWHRDLTAN--GAATMILNLGADGALEFGEEPQSDtgdkvdglrysssdhavvdgdevvPLERITLTDGDVLLLTGPARWEYlHRVVPCPGGT------E 307
                 77777666555344678******66..9****************9777666778888999999999999999999***************************9987754......4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.55
# Mc/sec: 1376.82
//
Query:       MMETSP1325-20131115|3408_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-20   71.3   0.0      1e-19   70.8   0.0    1.2  1  PF00639.16 PPIC-type PPIASE domain
    1.3e-15   57.5   0.2    2.4e-14   53.4   0.1    2.0  1  PF13616.1  PPIC-type PPIASE domain
  ------ inclusion threshold ------
      0.047   14.2   0.0      0.071   13.6   0.0    1.4  1  PF13145.1  PPIC-type PPIASE domain


Domain annotation for each model (and alignments):
>> PF00639.16  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.0   2.3e-23     1e-19       1      94 [.      41     142 ..      41     143 .. 0.89

  Alignments for each domain:
  == domain 1    score: 70.8 bits;  conditional E-value: 2.3e-23
  PF00639.16   1 HIliktkeseeekeeakakaeelleqlksge.........dtFaelakeySddkssakngGdLgwfergqlppefekavfslkegeisepvetkfgyhiikve 94 
                 HIlik +  +++ ee+k+k+ +   +  +           ++F++ a+++S  ++s+k+gG+Lg+f++gq++pef+++vf+ + g + +pv+t+fg h+i + 
  MMETSP1325-20131115|3408_1  41 HILIKGEGADKKCEEIKQKIYDTALKGTDASkgvqpekliSAFQQNARKFS-SCPSSKQGGSLGSFGKGQMVPEFDQVVFNEQIGVVHGPVRTQFGSHLILIL 142
                 ******99999999998887555444443335999*****88*********.***********************************************9875 PP

>> PF13616.1  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.1   5.3e-18   2.4e-14      15     116 ..      36     144 ..      32     145 .. 0.72

  Alignments for each domain:
  == domain 1    score: 53.4 bits;  conditional E-value: 5.3e-18
   PF13616.1  15 svkvshIlvdskg......kasrtkeeakakAdsilkalk.kg..adFaalAkkySdDksskangGdlgwftakgqmvkefedalfklkvgeiskvvktsfGyhIikvtdk 116
                 +++++hIl++ +g      + +++  +++ k  +  k ++ ++  + F++ A+k+S+ +s +++gG+lg f  kgqmv+ef++ +f+ + g + ++v t+fG h+i ++d+
  MMETSP1325-20131115|3408_1  36 QAEANHILIKGEGadkkceEIKQKIYDTALKGTDASKGVQpEKliSAFQQNARKFSSCPS-SKQGGSLGSFG-KGQMVPEFDQVVFNEQIGVVHGPVRTQFGSHLILILDR 144
                 57788999987663332222222222222222222223332223357*********9998.99*********.***********************************998 PP

>> PF13145.1  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.6e-05     0.071      70     108 ..      85     144 ..      36     146 .] 0.58

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.6e-05
   PF13145.1  70 se.....................sdlpeelaealfalkpgevsgpiesdngyyvvrvtev 108
                 ++                      ++ +e+ + +f+ + g v gp+++++g +++ + ++
  MMETSP1325-20131115|3408_1  85 QNarkfsscpsskqggslgsfgkGQMVPEFDQVVFNEQIGVVHGPVRTQFGSHLILILDR 144
                 2233333333333334443344433444**************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 714.02
//
Query:       MMETSP1325-20131115|3407_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-14   52.6   0.0    5.2e-14   51.9   0.0    1.4  1  PF13884.1 Chaperone of endosialidase
  ------ inclusion threshold ------
       0.38   11.1   7.8       0.41   10.9   3.7    2.0  2  PF11740.3 Plasmid replication region DNA-binding N-term


Domain annotation for each model (and alignments):
>> PF13884.1  Chaperone of endosialidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0   7.7e-18   5.2e-14       1      58 []      87     144 ..      87     144 .. 0.91

  Alignments for each domain:
  == domain 1    score: 51.9 bits;  conditional E-value: 7.7e-18
   PF13884.1   1 SDrrlKtnIrel.eda.lakvlklrpvtYrykdesirkskdsgrreyGfIAQeveavlpe 58 
                 SD+r Kt+++++ +++ la++l+++pvtYr++ +   +  d++  ++Gf+AQ+v++ lpe
  MMETSP1325-20131115|3407_1  87 SDARWKTDVADVpSNTsLAAILAIKPVTYRWNAD--APHSDKTSVDLGFLAQQVQESLPE 144
                 9***********99978**************974..56668888999***********98 PP

>> PF11740.3  Plasmid replication region DNA-binding N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.18   1.2e+03      37      67 ..     110     150 ..     103     155 .. 0.74
   2 ?   10.9   3.7     6e-05      0.41      72     119 ..     168     215 ..     163     216 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.18
   PF11740.3  37 isrvlkewreeqraaa..........esaapelPealseal 67 
                 i++v  +w++++++ +          +++++ lPe+l+ ++
  MMETSP1325-20131115|3407_1 110 IKPVTYRWNADAPHSDktsvdlgflaQQVQESLPEPLKSSV 150
                 66666777777777776667777777788888999987766 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 6e-05
   PF11740.3  72 aalwqaaqeeaeerlaaaraeaeaeraaleaelaeaaarvealeeele 119
                  a+++ a + +++ ++a+ ++ e+ r++le++ +++++rv  leee++
  MMETSP1325-20131115|3407_1 168 TAILTGALQGQQALIDAQNERVEEMRSSLESQVQQLQERVRVLEEERA 215
                 5678889999***********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       993  (0.0726302); expected 273.4 (0.02)
Passed bias filter:                      746  (0.0545641); expected 273.4 (0.02)
Passed Vit filter:                       126  (0.00921592); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.38s 00:00:01.06 Elapsed: 00:00:00.49
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|3410_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-42  145.6   0.2    1.4e-42  145.3   0.1    1.1  1  PF00149.23 Calcineurin-like phosphoesterase
     0.0059   16.9   0.1      0.012   15.9   0.1    1.4  1  PF04175.7  Protein of unknown function (DUF406)


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.3   0.1     2e-46   1.4e-42       2     199 ..      70     262 ..      69     264 .. 0.99

  Alignments for each domain:
  == domain 1    score: 145.3 bits;  conditional E-value: 2e-46
                 EEEEEEEBTBBHHHHHHHHHHHHHHHHHTTTSEEEEE-TTSSGHHCHHHHHHHHHHCCHHHHTTSCEEEE---TTTHHHHHHHHHSTTHHHHCHSTCSSTCCCEESTEEEEETTEEEEEEETTSHCSTCHHHHHHHHHHHHHHCCEEESEEEEEESSSSCHHHCTTTTH....................................SCCHHHHHHHHHHHHTTSSEEEE-SSS CS
  PF00149.23   2 rilvigDlHgglddleglllilleiaaeekpdlvlflGDlvdrgdwssetlalldylvlklllpipvfllrGNHEsdpgnsaygflkeqakdprglanaeeeyeelsitllttsgelgglsglypllggeiqeeqleeflalplralvdgkilltHgplsssggssddi..................................gggelfgpdalekllekygvdlvlrGHeH 199
                 +++v+gD+Hg+++dl    l+l++ia+e++ +++lflGD+vdrg +s e+  l+   +lk+++p++v l+rGNHEs++++++ygf++e++                                 ++++  +++ ++ e+f++lpl+a+vdgk+++ H++ls+s++  d+i                                  g+g+ fgpd  e +  ++g+  ++r+H+ 
  MMETSP1325-20131115|3410_1  70 PVTVVGDIHGQFYDL----LELFNIAGECPSTNFLFLGDYVDRGYYSVECATLV--TLLKVRYPKRVGLIRGNHESRQITQVYGFYDECL---------------------------------RKYGSADVWVMFTEVFDYLPLCASVDGKVFCPHAGLSPSLDETDQIqaltrvqevphegpicdlvwsdpddrggwgisprGAGYTFGPDISEQFNHRNGFNFIVRAHQL 262
                 89*************....***********************************..*********************************9.................................5**********************************************************************************************************86 PP

>> PF04175.7  Protein of unknown function (DUF406)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   1.8e-06     0.012       8      61 ..       8      64 ..       3      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.8e-06
                XXXXXXX----..---S-----EEEEEEE-S-HHHHHHHHHHHHHHHHHH-...--- CS
   PF04175.7  8 eceacGcfvdi..gsiideeDtvlelefvgdskeeaeaelakltekAkeve.epaei 61
                ++++cG++v +   +++ ++D  +++e+    ++  ++e+++l++kAke   e++++
  MMETSP1325-20131115|3410_1  8 SATNCGATVGVmtSTMLSNSDLDAQIERLKRRENLSQSEVKALCSKAKEILsEEQNM 64
                568899777653378**********************************99776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       625  (0.0457139); expected 273.4 (0.02)
Passed bias filter:                      592  (0.0433002); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.49
# Mc/sec: 1599.20
//
Query:       MMETSP1325-20131115|3411_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 818.76
//
Query:       MMETSP1325-20131115|3409_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.23   10.8   3.7       0.34   10.2   0.1    2.5  2  PF10436.4 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
       0.34   10.4   2.5       0.99    8.9   0.1    2.6  3  PF03672.8 Uncharacterised protein family (UPF0154)


Domain annotation for each model (and alignments):
>> PF10436.4  Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1     5e-05      0.34      54     113 ..       8      62 ..       4      86 .. 0.82
   2 ?    1.3   0.5     0.028   1.9e+02      34     112 ..     112     205 ..      78     297 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 5e-05
                 HHHHHHHHHHHHHHHHHGG.GSS-TT-HHHHHHHHHHHHHHCTTHHHHHH---HHHHHHS CS
   PF10436.4  54 siskvrewYlqsfeellkfpepktlednekftkvlekikerHdnvvptlaqGvlelkekl 113
                 +i++v + + +s ++l +     +l+dn ++++ l ki+++ +++++ laq v e++e+ 
  MMETSP1325-20131115|3409_1   8 EIQDVSRALRESTKNLCR-----NLKDNPNISDNLVKIQQERTELIEILAQTVREMQESG 62 
                 567777777777777766.....7999*****************************9875 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.028
                 HHHHHHHHHTTS-HHHHTSHHHHHHHHHHHHHHHHHHGG...............GSS-TT-HHHHHHHHHHHHHHCT.THHHHHH---HHHHHH CS
   PF10436.4  34 rlAhrvkeleelPdglnkmpsiskvrewYlqsfeellkf..............pepktlednekftkvlekikerHd.nvvptlaqGvlelkek 112
                 r+A +  e+ +l  +l + +s  +v + Y +     ++               +++k+ e + ++ +v++k   ++     + l++ + e+ ek
  MMETSP1325-20131115|3409_1 112 RVADQKAEIARLKEQLQSIKSKTTVDAKYFRKEAHAMTSsilrtyrqaeraqeTTIKDSERKLEMENVVHKETVDFLkRKQESLSTELAEWTEK 205
                 5566666666666666666666666666654433332222344444444444433333343444444444433333312234444444444444 PP

>> PF03672.8  Uncharacterised protein family (UPF0154)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00015      0.99      18      39 ..      19      40 ..      18      44 .. 0.90
   2 ?    0.2   0.0     0.073     5e+02      39      60 ..      67      88 ..      61      92 .. 0.77
   3 ?   -3.1   0.0      0.81   5.5e+03      19      27 ..     277     285 ..     269     286 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00015
   PF03672.8 18 srkimkkqLkkNPPinedairl 39
                s k + + Lk+NP i+++ +++
  MMETSP1325-20131115|3409_1 19 STKNLCRNLKDNPNISDNLVKI 40
                679999************9996 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.073
   PF03672.8 39 lmlaqmGrkpSekqinqilkai 60
                l+++  G k+ + ++++i+++ 
  MMETSP1325-20131115|3409_1 67 LVMKVHGDKLAQDRLHEIIQRE 88
                345556***********99875 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 0.81
   PF03672.8  19 rkimkkqLk 27 
                 ++i k++Lk
  MMETSP1325-20131115|3409_1 277 QRIAKRYLK 285
                 455566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2337  (0.170933); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.07u 0.36s 00:00:01.43 Elapsed: 00:00:00.68
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|3415_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-05   23.7   0.0    3.6e-05   23.3   0.0    1.1  1  PF00156.22 Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> PF00156.22  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   2.6e-09   3.6e-05       8      96 ..      29     123 ..      26     124 .] 0.91

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 2.6e-09
                 --HHHHHHHHHHHHHHHT----E..EEEEE------HHHHHHHHHHHHHH-----SS-S....EE---------EEEEES-GGGGTTSEEEEEEE CS
  PF00156.22   8 edlreagrllaeklreekgkkdv..vvGiargGvplatelaraLglpldlvrvrkssap....assetsrkreaailesrpeedlkgkrvliVDD 96 
                 e + ++g++la k+  e ++  +  vv+i+  +   a + a  Lg+p+   +++ +++       ++ sr+++   + +  + + kgk+vl+VDD
  MMETSP1325-20131115|3415_1  29 ESRLRMGEKLALKIMREHPDHGIdvVVPIPDTSRASALQCAYTLGCPFREGFIKNRYIArtfiMPGQASRRKNVRLKLNTIKNEFKGKNVLLVDD 123
                 6778899999999999888877777**********************99888888888889**9******************************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 645.97
//
Query:       MMETSP1325-20131115|3414_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.7    7.4  10.1       0.11   11.9   2.3    1.8  2  PF02660.10 Glycerol-3-phosphate acyltransferase


Domain annotation for each model (and alignments):
>> PF02660.10  Glycerol-3-phosphate acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.5     0.049   6.7e+02     114     140 ..      84     110 ..      75     117 .. 0.46
   2 ?   11.9   2.3   8.3e-06      0.11     100     144 ..     117     161 ..     114     163 .] 0.92

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.049
  PF02660.10 114 alillivflivllltryvslasliaal 140
                 ++ +++v +i++  + + s   l++++
  MMETSP1325-20131115|3414_1  84 VVSAIAVCAIFIKCMEKCSAVILLGTF 110
                 222333455555444444444444433 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 8.3e-06
  PF02660.10 100 attlGvllvlsplvalillivflivllltryvslasliaalllpl 144
                 a++lGv+l  ++ ++ ++ iv++++++  +++  a +i++ + +l
  MMETSP1325-20131115|3414_1 117 AVYLGVVLRAEIFYFAAACIVLWVLVFKAKIIKAAEIIGYSAHAL 161
                 99************************************9987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       720  (0.0526624); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 781.21
//
Query:       MMETSP1325-20131115|3416_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 790.29
//
Query:       MMETSP1325-20131115|3417_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-17   62.2   1.5      0.001   18.9   0.0    4.4  4  PF13431.1  Tetratricopeptide repeat
    1.2e-16   60.0   8.9    3.5e-08   32.8   0.8    3.3  3  PF13414.1  TPR repeat
    3.2e-16   58.2   8.6    9.1e-07   28.8   0.7    4.6  4  PF13428.1  Tetratricopeptide repeat
      5e-16   58.7  13.5    2.7e-09   37.3   1.4    2.6  2  PF13432.1  Tetratricopeptide repeat
    1.1e-10   40.3   0.0     0.0043   16.6   0.0    3.6  4  PF13181.1  Tetratricopeptide repeat
    4.5e-10   38.5   5.6    0.00079   19.0   0.1    4.7  4  PF07719.12 Tetratricopeptide repeat
    1.3e-08   34.6   0.2      0.049   13.9   0.0    4.0  4  PF13174.1  Tetratricopeptide repeat
    1.2e-07   30.8   2.1    0.00083   18.7   0.0    3.7  3  PF00515.23 Tetratricopeptide repeat
    1.4e-06   27.5   3.6      0.037   13.7   0.1    4.2  4  PF13176.1  Tetratricopeptide repeat
    4.1e-05   23.6   0.5          1    9.3   0.0    3.5  4  PF12583.3  Tripeptidyl peptidase II N terminal
    0.00051   19.7   0.0    0.00096   18.8   0.0    1.5  1  PF00397.21 WW domain
     0.0017   18.1   7.8       0.27   11.0   0.5    3.1  3  PF13424.1  Tetratricopeptide repeat
     0.0018   17.1   0.0        2.4    6.9   0.0    3.3  3  PF02259.18 FAT domain


Domain annotation for each model (and alignments):
>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   2.7e-06    0.0028       2      34 .]      13      45 ..      12      45 .. 0.94
   2 !   14.9   0.0   1.9e-05      0.02       2      33 ..      47      79 ..      46      80 .. 0.89
   3 !   18.9   0.0   9.6e-07     0.001       2      33 ..      82     114 ..      81     115 .. 0.89
   4 !    6.9   0.1    0.0071       7.4       5      24 ..     120     139 ..     118     149 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 2.7e-06
   PF13431.1  2 yekaleldPnnadaynnLAelllnnGdleeAeq 34
                ++ a++ dP + +a+ nL+ell+++ d++ Ae+
  MMETSP1325-20131115|3417_1 13 FLAAINSDPGHIEAHLNLGELLAKRSDTKGAEA 45
                689**************************9985 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 1.9e-05
   PF13431.1  2 yekaleldPnnadaynnLAelllnnG.dleeAe 33
                ++ a++ dPn a  +++L++ll++n+ d++ Ae
  MMETSP1325-20131115|3417_1 47 FRAAIRADPNQARGWTRLGRLLFENKfDHDGAE 79
                899*******************98776888887 PP

  == domain 3    score: 18.9 bits;  conditional E-value: 9.6e-07
   PF13431.1   2 yekaleldPnnadaynnLAellln.nGdleeAe 33 
                 ++ a++ dPn++ a+++L+ ll++ ++dl+ Ae
  MMETSP1325-20131115|3417_1  82 FRAAVKADPNSYSALFELGHLLHRvRNDLDGAE 114
                 899******************996478999887 PP

  == domain 4    score: 6.9 bits;  conditional E-value: 0.0071
   PF13431.1   5 aleldPnnadaynnLAelll 24 
                 al  +P +a a+++LA ll 
  MMETSP1325-20131115|3417_1 120 ALLACPGHASAHHCLADLLN 139
                 7889************9986 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.1     3e-09   3.1e-06      20      69 .]       7      55 ..       2      55 .. 0.95
   2 !   32.8   0.8   3.3e-11   3.5e-08       2      65 ..      57     121 ..      56     125 .. 0.93
   3 !   11.7   0.7   0.00013      0.13      16      50 ..     107     141 ..     102     154 .. 0.89

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 3e-09
   PF13414.1 20 deAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                + A++ +  A+  dp + e+++nl+ ++ k+  d + A ++++ A++ dP
  MMETSP1325-20131115|3417_1  7 ERAERSFLAAINSDPGHIEAHLNLGELLAKRS-DTKGAEAAFRAAIRADP 55
                78*****************************9.79*************99 PP

  == domain 2    score: 32.8 bits;  conditional E-value: 3.3e-11
   PF13414.1   2 nAealkelGnalfkeg.dydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAl 65 
                 +A  + +lG  lf+++ d+d+A++a++ A++ dpn+ ++++ l++++ +  +d + A  +y  Al
  MMETSP1325-20131115|3417_1  57 QARGWTRLGRLLFENKfDHDGAEAAFRAAVKADPNSYSALFELGHLLHRVRNDLDGAESAYCAAL 121
                 68889********9877********************************************9998 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 0.00013
   PF13414.1  16 egdydeAieayekAleldpnnaelyynlAlaylkl 50 
                 ++d+d+A+ ay  Al  +p +a+++  lA ++ ++
  MMETSP1325-20131115|3417_1 107 RNDLDGAESAYCAALLACPGHASAHHCLADLLNER 141
                 799**************************998664 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0014       1.5      17      44 .]       6      33 ..       2      33 .. 0.92
   2 !   28.8   0.7   8.6e-10   9.1e-07       2      44 .]      25      67 ..      24      67 .. 0.97
   3 !   16.8   0.1   6.2e-06    0.0065      15      43 ..      73     101 ..      65     102 .. 0.83
   4 !   15.3   0.1   1.9e-05      0.02       3      44 .]      95     137 ..      94     137 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0014
   PF13428.1 17 pdeAiallrralalaPddaealllLarl 44
                 ++A++ + +a+  +P++ ea+l+L++l
  MMETSP1325-20131115|3417_1  6 DERAERSFLAAINSDPGHIEAHLNLGEL 33
                589**********************986 PP

  == domain 2    score: 28.8 bits;  conditional E-value: 8.6e-10
   PF13428.1  2 eallalarallalGdpdeAiallrralalaPddaealllLarl 44
                ea+l l+++l+ + d+++A+a++r+a++++P++a+ +++L+rl
  MMETSP1325-20131115|3417_1 25 EAHLNLGELLAKRSDTKGAEAAFRAAIRADPNQARGWTRLGRL 67
                7999*************************************97 PP

  == domain 3    score: 16.8 bits;  conditional E-value: 6.2e-06
   PF13428.1  15 GdpdeAiallrralalaPddaealllLar 43 
                  d+d+A+a++r+a++++P++  al++L+ 
  MMETSP1325-20131115|3417_1  73 FDHDGAEAAFRAAVKADPNSYSALFELGH 101
                 399**********************9986 PP

  == domain 4    score: 15.3 bits;  conditional E-value: 1.9e-05
   PF13428.1   3 allalaralla.lGdpdeAiallrralalaPddaealllLarl 44 
                 al +l+++l + ++d+d+A+ ++ +al ++P++a a++ La+l
  MMETSP1325-20131115|3417_1  95 ALFELGHLLHRvRNDLDGAESAYCAALLACPGHASAHHCLADL 137
                 678899886553899**************************86 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   1.4   2.5e-12   2.7e-09      14      65 .]       7      58 ..       4      58 .. 0.96
   2 !   26.9   2.4   4.8e-09     5e-06       2      59 ..      63     123 ..      62     130 .. 0.89

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 2.5e-12
   PF13432.1 14 deAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPddp 65
                ++A++ + aa+  +P++ ea+l+l+e+l+++++ ++A+a++raa++++P+++
  MMETSP1325-20131115|3417_1  7 ERAERSFLAAINSDPGHIEAHLNLGELLAKRSDTKGAEAAFRAAIRADPNQA 58
                89***********************************************975 PP

  == domain 2    score: 26.9 bits;  conditional E-value: 4.8e-09
   PF13432.1   2 alArallraGd.ydeAlaaleaalalaPeaaeallllaeall.rlgrldeAa.allraala 59 
                 +l+r+l++++   d A+aa++aa++++P  + al++l+ +l+  +++ld+A+ a+ +a+la
  MMETSP1325-20131115|3417_1  63 RLGRLLFENKFdHDGAEAAFRAAVKADPNSYSALFELGHLLHrVRNDLDGAEsAYCAALLA 123
                 578899999988******************************788*******999999874 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       9.3   9.7e+03      19      32 ..       8      21 ..       6      21 .. 0.76
   2 !   12.4   0.0   8.8e-05     0.092       2      33 ..      25      56 ..      24      57 .. 0.94
   3 !   16.6   0.0   4.1e-06    0.0043       2      33 ..      59      91 ..      58      93 .. 0.88
   4 !    7.3   0.0    0.0038         4       2      28 ..      94     121 ..      93     125 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 9.3
                HHHHHHH---HHHH CS
   PF13181.1 19 kAkeylekalelkp 32
                 A+ ++  a+  +p
  MMETSP1325-20131115|3417_1  8 RAERSFLAAINSDP 21
                68889998887776 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 8.8e-05
                --TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelkpr 33
                +a++nlG+++++  d++ A+++++ a+  +p+
  MMETSP1325-20131115|3417_1 25 EAHLNLGELLAKRSDTKGAEAAFRAAIRADPN 56
                789**************************995 PP

  == domain 3    score: 16.6 bits;  conditional E-value: 4.1e-06
                --TTT---HHHH.TT-HHHHHHHHH---HHHH. CS
   PF13181.1  2 kayynlGdiYrq.lGdydkAkeylekalelkpr 33
                + +++lG+++++ + d+d A+++++ a++ +p+
  MMETSP1325-20131115|3417_1 59 RGWTRLGRLLFEnKFDHDGAEAAFRAAVKADPN 91
                789******5555******************94 PP

  == domain 4    score: 7.3 bits;  conditional E-value: 0.0038
                 --TTT---HHHH.TT-HHHHHHHHH--- CS
   PF13181.1   2 kayynlGdiYrq.lGdydkAkeylekal 28 
                  a+++lG+++    +d d A+++++ al
  MMETSP1325-20131115|3417_1  94 SALFELGHLLHRvRNDLDGAESAYCAAL 121
                 58999****8888************998 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.14   1.5e+02      18      34 .]       7      23 ..       5      23 .. 0.89
   2 !   19.0   0.1   7.5e-07   0.00079       2      33 ..      25      56 ..      24      57 .. 0.97
   3 !   14.1   0.0   2.8e-05      0.03       1      33 [.      58      91 ..      58      92 .. 0.89
   4 ?    2.1   0.1       0.2   2.1e+02       3      33 ..      95     126 ..      93     127 .. 0.71

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.14
                HHHHHHHHHHHHH-TTS CS
  PF07719.12 18 eeAleafekAleldPnn 34
                e+A++ f  A+  dP++
  MMETSP1325-20131115|3417_1  7 ERAERSFLAAINSDPGH 23
                89************986 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 7.5e-07
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldPn 33
                ea+ nlG++++k+ d + A++af+ A++ dPn
  MMETSP1325-20131115|3417_1 25 EAHLNLGELLAKRSDTKGAEAAFRAAIRADPN 56
                89*****************************8 PP

  == domain 3    score: 14.1 bits;  conditional E-value: 2.8e-05
                HHHHHHHHHHHHHTT-H.HHHHHHHHHHHHH-TT CS
  PF07719.12  1 aealynlGlayyklgdy.eeAleafekAleldPn 33
                a+++ +lG+++++++   + A++af+ A++ dPn
  MMETSP1325-20131115|3417_1 58 ARGWTRLGRLLFENKFDhDGAEAAFRAAVKADPN 91
                678999999999998777***************9 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.2
                 HHHHHHHHHHHTT-H.HHHHHHHHHHHHH-TT CS
  PF07719.12   3 alynlGlayyklgdy.eeAleafekAleldPn 33 
                 al++lG ++ + ++  + A+ a+  Al  +P+
  MMETSP1325-20131115|3417_1  95 ALFELGHLLHRVRNDlDGAESAYCAALLACPG 126
                 67777777776666669999999888877776 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       3.5   3.6e+03      15      32 ..       5      22 ..       4      23 .. 0.84
   2 !   13.9   0.0   4.7e-05     0.049       1      32 [.      25      56 ..      25      56 .. 0.95
   3 !   13.1   0.0   8.8e-05     0.093       5      33 .]      63      92 ..      61      92 .. 0.94
   4 ?    2.2   0.0      0.25   2.6e+02       2      23 ..      95     117 ..      94     117 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 3.5
                HHHHHHHHHHHHHHH-TT CS
   PF13174.1 15 dtdeAlealerlikeyPd 32
                d ++A + +   i++ P+
  MMETSP1325-20131115|3417_1  5 DDERAERSFLAAINSDPG 22
                568999999999999997 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 4.7e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  1 dAlyklalsyyklgdtdeAlealerlikeyPd 32
                +A ++l++++ k  dt  A +a++  i+  P+
  MMETSP1325-20131115|3417_1 25 EAHLNLGELLAKRSDTKGAEAAFRAAIRADPN 56
                799*********88**************9997 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 8.8e-05
                HHHHHHHHHH.HHHHHHHHHHHHHHH-TT- CS
   PF13174.1  5 klalsyyklg.dtdeAlealerlikeyPdS 33
                +l++++++++ d+d A +a++  +k  P+S
  MMETSP1325-20131115|3417_1 63 RLGRLLFENKfDHDGAEAAFRAAVKADPNS 92
                79******777******************9 PP

  == domain 4    score: 2.2 bits;  conditional E-value: 0.25
                 HHHHHHHHHHH.HHHHHHHHHHH CS
   PF13174.1   2 Alyklalsyyk.lgdtdeAleal 23 
                 Al+ l+ ++ +  +d d A  a+
  MMETSP1325-20131115|3417_1  95 ALFELGHLLHRvRNDLDGAESAY 117
                 9*****99998899***999887 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   7.9e-07   0.00083       2      33 ..      25      56 ..      24      57 .. 0.96
   2 !    9.2   0.0   0.00079      0.83       1      33 [.      58      91 ..      58      92 .. 0.82
   3 ?   -0.9   0.0       1.2   1.3e+03       3      13 ..      95     105 ..      93     117 .. 0.67

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 7.9e-07
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALelnPn 33
                +a+ nlG ++ k  + + A+++++ A++ +Pn
  MMETSP1325-20131115|3417_1 25 EAHLNLGELLAKRSDTKGAEAAFRAAIRADPN 56
                89*****************************9 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00079
                HHHHHHHHHHHHHTT.-HHHHHHHHHHHHHHHTT CS
  PF00515.23  1 akalynlGnaylklg.kydeAleyyekALelnPn 33
                a+ + +lG ++++++ ++d A+++++ A++ +Pn
  MMETSP1325-20131115|3417_1 58 ARGWTRLGRLLFENKfDHDGAEAAFRAAVKADPN 91
                5667777777776666*****************9 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 1.2
                 HHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylk 13 
                 al+ lG+++++
  MMETSP1325-20131115|3417_1  95 ALFELGHLLHR 105
                 67777777654 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.25   2.6e+02      13      35 ..       4      24 ..       1      25 [. 0.87
   2 !   13.7   0.1   3.5e-05     0.037       1      35 [.      26      58 ..      26      59 .. 0.93
   3 !    6.9   0.0    0.0052       5.5       2      33 ..      61      91 ..      61      94 .. 0.86
   4 ?    3.2   0.1      0.08        84       1      22 [.      95     117 ..      95     125 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.25
   PF13176.1 13 gdyekAielyeraLaltkdplda 35
                 d e+A++ + +  a+ +dp+++
  MMETSP1325-20131115|3417_1  4 SDDERAERSFLA--AINSDPGHI 24
                6889********..******997 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 3.5e-05
   PF13176.1  1 allnLarlysrlgdyekAielyeraLaltkdplda 35
                a+lnL++l  ++ d++ A+ ++++  a++ dp+ a
  MMETSP1325-20131115|3417_1 26 AHLNLGELLAKRSDTKGAEAAFRA--AIRADPNQA 58
                789*********************..*99999876 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0052
   PF13176.1  2 llnLarl.ysrlgdyekAielyeraLaltkdpl 33
                + +L+rl +++  d++ A+ ++++  a++ dp+
  MMETSP1325-20131115|3417_1 61 WTRLGRLlFENKFDHDGAEAAFRA--AVKADPN 91
                56899996666*************..9999987 PP

  == domain 4    score: 3.2 bits;  conditional E-value: 0.08
   PF13176.1   1 allnLarlysr.lgdyekAiely 22 
                 al+ L++l  r ++d + A+++y
  MMETSP1325-20131115|3417_1  95 ALFELGHLLHRvRNDLDGAESAY 117
                 7999****99999******9999 PP

>> PF12583.3  Tripeptidyl peptidase II N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00096         1      91     118 ..       5      32 ..       3      43 .. 0.90
   2 ?   -1.5   0.0       2.2   2.3e+03      90     108 ..      38      56 ..      32      59 .. 0.60
   3 ?    3.2   0.0     0.076        80      88     113 ..      71      96 ..      69     104 .. 0.87
   4 !    6.9   0.0    0.0055       5.8      88     121 ..     106     139 ..     102     143 .. 0.89

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00096
   PF12583.3  91 dlEnAEkiYkevvkahPkhlqAhLlliq 118
                 d E AE+ + + ++ +P h++AhL l +
  MMETSP1325-20131115|3417_1   5 DDERAERSFLAAINSDPGHIEAHLNLGE 32 
                 789*********************9965 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 2.2
   PF12583.3  90 ldlEnAEkiYkevvkahPk 108
                  d+  AE+ +++ ++a+P+
  MMETSP1325-20131115|3417_1  38 SDTKGAEAAFRAAIRADPN 56 
                 4555566666666666665 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.076
   PF12583.3  88 aKldlEnAEkiYkevvkahPkhlqAh 113
                 +K d + AE+ +++ vka+P+  +A 
  MMETSP1325-20131115|3417_1  71 NKFDHDGAEAAFRAAVKADPNSYSAL 96 
                 69999***************988875 PP

  == domain 4    score: 6.9 bits;  conditional E-value: 0.0055
   PF12583.3  88 aKldlEnAEkiYkevvkahPkhlqAhLlliqnie 121
                 ++ dl+ AE  Y + + a P h +Ah  l++ ++
  MMETSP1325-20131115|3417_1 106 VRNDLDGAESAYCAALLACPGHASAHHCLADLLN 139
                 67899*********************99998765 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   9.1e-07   0.00096       2      31 .]     179     207 ..     178     207 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 9.1e-07
                 --SEE.E.E.E----EEEEETTT--EESS-- CS
  PF00397.21   2 ppgWe.ersddddGrvYYyNheTgetqWekP 31 
                 + +W+ +++ +++G  YY++  +g  qWe+P
  MMETSP1325-20131115|3417_1 179 LAEWRsAVD-PSSGARYYFDR-NGLVQWEDP 207
                 678**5555.446********.********9 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.1   0.00089      0.94      42      76 ..      20      54 ..       6      56 .. 0.82
   2 !   11.0   0.5   0.00026      0.27       2      72 ..      55     120 ..      54     121 .. 0.83
   3 ?    4.3   0.6     0.033        34       3      50 ..      91     139 ..      89     142 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00089
   PF13424.1 42 hpdtaralnnlanlylalgdydeAleylekAleia 76
                +p    a +nl++l++++ d + A++ ++ A++++
  MMETSP1325-20131115|3417_1 20 DPGHIEAHLNLGELLAKRSDTKGAEAAFRAAIRAD 54
                455678999********************999875 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00026
   PF13424.1   2 pdlatilnnlalvlr.rlgdydeAlelyekalellrelgddhpdtaralnnlanlyla.lgdydeAleylekA 72 
                 p+ a+ +++l+ +l+  + d+d A++ ++ a++        +p+  +al++l+ l+++ ++d+d A+  +  A
  MMETSP1325-20131115|3417_1  55 PNQARGWTRLGRLLFeNKFDHDGAEAAFRAAVKA-------DPNSYSALFELGHLLHRvRNDLDGAESAYCAA 120
                 67788899***88888***************976.......35557899999999999788899999888666 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.033
   PF13424.1   3 dlatilnnlalvlr.rlgdydeAlelyekalellrelgddhpdtaraln 50 
                 +  ++l++l+++l+    d+d A++ y  al  +  +  +h+ +a++ln
  MMETSP1325-20131115|3417_1  91 NSYSALFELGHLLHrVRNDLDGAESAYCAALLACPGHASAHHCLADLLN 139
                 5567899999888879999999999999999888555555556666555 PP

>> PF02259.18  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0023       2.4     253     304 ..      25      70 ..      18      75 .. 0.90
   2 !    5.3   0.0     0.007       7.3     275     307 ..      76     108 ..      71     149 .. 0.69
   3 ?   -2.0   0.0       1.2   1.3e+03      51      75 ..     170     194 ..     162     196 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0023
  PF02259.18 253 rcflklGewleklksnweqekkdeilkaystatefdpqwykawhswalanfe 304
                 +++l lGe l+k        + ++++ a+++a+  dp++++ w ++++  fe
  MMETSP1325-20131115|3417_1  25 EAHLNLGELLAKR------SDTKGAEAAFRAAIRADPNQARGWTRLGRLLFE 70 
                 5788888888888......99************************9998887 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.007
  PF02259.18 275 deilkaystatefdpqwykawhswalanfevvq 307
                 d+++ a+++a++ dp++y+a  ++++   +v +
  MMETSP1325-20131115|3417_1  76 DGAEAAFRAAVKADPNSYSALFELGHLLHRVRN 108
                 667777777777777777777777766555544 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 1.2
  PF02259.18  51 yIdkarellvtelsalvgesynray 75 
                 +++   +ll++e+++ v  s+ ++y
  MMETSP1325-20131115|3417_1 170 LVQTPSQLLLAEWRSAVDPSSGARY 194
                 5666679999999999999998888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 949.98
//
Query:       MMETSP1325-20131115|3419_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.57
# Mc/sec: 181.79
//
Query:       MMETSP1325-20131115|3418_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.044   13.3   0.2       0.13   11.8   0.1    1.8  1  PF06582.7 Repeat of unknown function (DUF1136)


Domain annotation for each model (and alignments):
>> PF06582.7  Repeat of unknown function (DUF1136)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   9.5e-06      0.13       8      24 ..      28      45 ..      23      47 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.5e-06
   PF06582.7  8 PegLeKIqeLEdpsr.qR 24
                 e+L+KI++LE  s  +R
  MMETSP1325-20131115|3418_1 28 DEALQKIRHLERISEcKR 45
                47*********9998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.68
# Mc/sec: 701.29
//
Query:       MMETSP1325-20131115|3423_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-23   83.8   0.1    1.2e-23   83.6   0.1    1.1  1  PF02771.11 Acyl-CoA dehydrogenase, N-terminal domain
     0.0086   15.4   0.0      0.014   14.7   0.0    1.4  1  PF02770.14 Acyl-CoA dehydrogenase, middle domain


Domain annotation for each model (and alignments):
>> PF02771.11  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.6   0.1   1.8e-27   1.2e-23      18     111 ..       3      95 ..       1      97 [. 0.93

  Alignments for each domain:
  == domain 1    score: 83.6 bits;  conditional E-value: 1.8e-27
                 HTTTTHHHHHHHT---HHHHHHHHH---TSTTS-TT-------HHHHHHHHHHHHHH--TTCHHHHHHHHCCHHHHHH---HHHHHHHHHHHHC CS
  PF02771.11  18 elapeaaewdeeeefprelwrklaelGllgitvpeeyGGagldalelalvleelaradaglavalgvhsslvapailrfGteeqkkkyLpklas 111
                  + p+aae+d++ +fp++++++++elGl+++++peeyGG g+ +l+ ++++eela++++g+++a+ ++ +l+  +++ +G+e qkkkyL ++++
  MMETSP1325-20131115|3423_1   3 VIIPQAAEYDRTMAFPHDIFEQAWELGLVNAHIPEEYGGPGMHTLDGCVIAEELAYGCSGIQTAMEAN-TLAQMPVILAGNEFQKKKYLGRMTE 95 
                 46899****9888**************************************************99995.677679****************986 PP

>> PF02770.14  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0     2e-06     0.014       1      18 [.     101     118 ..     101     119 .] 0.94

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2e-06
  PF02770.14   1 alalTEpgaGsDvanlsT 18 
                 a++++E gaGsDva+++T
  MMETSP1325-20131115|3423_1 101 AYGVSEAGAGSDVAAIKT 118
                 789*************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 500.29
//
Query:       MMETSP1325-20131115|3422_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-23   81.3   0.1    3.8e-23   80.9   0.1    1.2  1  PF00673.16 ribosomal L5P family C-terminus
    1.2e-20   72.9   0.0    5.5e-20   70.7   0.0    2.0  2  PF00281.14 Ribosomal protein L5


Domain annotation for each model (and alignments):
>> PF00673.16  ribosomal L5P family C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.9   0.1   5.6e-27   3.8e-23       1      95 []      62     161 ..      62     161 .. 0.97

  Alignments for each domain:
  == domain 1    score: 80.9 bits;  conditional E-value: 5.6e-27
                 B---BEEE---HHHHHHHHHHH---TS-TT------S-------EEE----STTSSS--GGGSSS----EEEEE.............E--SSHHHHHHHHHH------ CS
  PF00673.16   1 pigvkvTLrgekmyefLekllkvvlprirdfrglskksfDksGnfsfGikeqiifpeikydkvdgifGmditiv.............ttaktdkearallkelgipfl 95 
                 +i+v+v +rg+k+ e+Le+ lkv   +   +++l++k+f+++Gnf+fGi+e+i++ +ikyd+++gi+Gmd+++v               ak++k+++ ++ke++i+++
  MMETSP1325-20131115|3422_1  62 KISVHVSVRGDKALEILERGLKV---K---EYELKSKNFSNTGNFGFGITEHIDL-GIKYDPSTGIYGMDFFVVlgrrgfriskrklLPAKIGKQHK-ITKEEAIQWF 161
                 699********************...8...*************************.******************************999********.******9985 PP

>> PF00281.14  Ribosomal protein L5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.7   0.0   8.1e-24   5.5e-20       1      56 []       5      58 ..       5      58 .. 0.99
   2 ?   -0.8   0.0      0.18   1.2e+03      10      31 ..      62      83 ..      61      87 .. 0.65

  Alignments for each domain:
  == domain 1    score: 70.7 bits;  conditional E-value: 8.1e-24
                TCCCS-EEEEEEEE------SS-CHHHHHHHCHHHH-----B--B--S-B-SSCS- CS
  PF00281.14  1 NvmevPklekivvntgvGEagenkiLekaakeleeisGQkPvitkakksiasFkir 56
                N+m+++++ek+ +n++vGE+g++  L++aa +le+++GQ+Pv++ka+++++sF+ir
  MMETSP1325-20131115|3422_1  5 NPMKEIRVEKLILNCCVGESGDR--LTRAARVLEQLTGQEPVYSKARYTVRSFGIR 58
                99*********************..******************************9 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.18
                EEEEE---.---SS-CHHHHHHH CS
  PF00281.14 10 kivvntgv.GEagenkiLekaak 31
                ki v+ +v G+ + + iLe+++k
  MMETSP1325-20131115|3422_1 62 KISVHVSVrGDKALE-ILERGLK 83
                777777652666665.8888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 863.69
//
Query:       MMETSP1325-20131115|3426_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 343.01
//
Query:       MMETSP1325-20131115|3425_1  [L=644]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00032   20.3   0.1        0.5   10.1   0.0    2.7  2  PF07045.6  Protein of unknown function (DUF1330)
  ------ inclusion threshold ------
      0.047   13.6   0.1        4.1    7.4   0.0    2.7  2  PF03992.11 Antibiotic biosynthesis monooxygenase


Domain annotation for each model (and alignments):
>> PF07045.6  Protein of unknown function (DUF1330)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   7.3e-05       0.5      38      62 ..     113     137 ..     105     140 .. 0.88
   2 !    7.2   0.0   0.00059         4      37      60 ..     422     445 ..     411     447 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 7.3e-05
                 SS--EEEEESSHHHHHHHHTSHHHH CS
   PF07045.6  38 ptrtVvieFpsmeaArawynSpeYq 62 
                 ++++V+++F+s+   r+w++S+e +
  MMETSP1325-20131115|3425_1 113 RHKVVLLKFKSYPCMRKWMDSAELA 137
                 6799*****************9965 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.00059
                 SSS--EEEEESSHHHHHHHHTSHH CS
   PF07045.6  37 dptrtVvieFpsmeaArawynSpe 60 
                  p+ +V+++F s+   ++w nS+e
  MMETSP1325-20131115|3425_1 422 NPEHVVLFRFASYPLMERWINSDE 445
                 5789******************97 PP

>> PF03992.11  Antibiotic biosynthesis monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0    0.0099        68       2      76 ..      62     140 ..      61     142 .. 0.77
   2 ?    7.4   0.0   0.00059       4.1       2      46 ..     365     408 ..     364     447 .. 0.87

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.0099
                 EEEEEEEEEEGGHHHHHHHHHHHHHHHHHTT-----EEEEEE....CTTSCEEEEEEEEESSHHHHHHHHTSHHHHHHH CS
  PF03992.11   2 vivvnefkvkpgaeeafeeafaeaaesllaeepGflgyellr....stddpdevvvieeWeseaafrahlksphfkaah 76 
                 v +v++++++p   e+ + a+ + +++ la+ +Gf++  +      ++   ++ vv+ +++s   +r++ +s +  ++ 
  MMETSP1325-20131115|3425_1  62 VSAVIKMRIEPSTPEESVFAWIQGIGEALAQFDGFHSRKIINlpqtPATVHRHKVVLLKFKSYPCMRKWMDSAELAEWI 140
                 568999*******99999996666665669******9998844445777777788888888888888888888877775 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.00059
                 EEEEEEEEEEGGHHHHHHHHHHHHHHHHHTT-----EEEEEECTT CS
  PF03992.11   2 vivvnefkvkpgaeeafeeafaeaaesllaeepGflgyellrstd 46 
                 v+v ++  vk +  ++f++   e+a ++ a+ +Gflg ++++ + 
  MMETSP1325-20131115|3425_1 365 VTVSATHYVKWECTDEFARWTLEMAAAM-AKAEGFLGSDVFHYDS 408
                 68888889999999************89.9*********998333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (644 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.96u 0.39s 00:00:01.35 Elapsed: 00:00:00.61
# Mc/sec: 2529.92
//
Query:       MMETSP1325-20131115|3427_1  [L=699]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-09   35.5   0.1      0.028   13.9   0.0    3.7  3  PF13833.1  EF-hand domain pair
    1.7e-05   23.6   0.7    3.8e-05   22.5   0.5    1.6  1  PF00641.13 Zn-finger in Ran binding protein and others
    3.3e-05   23.8   0.0      0.058   13.4   0.0    3.2  3  PF13499.1  EF-hand domain pair
     0.0006   18.8   0.3         21    4.5   0.0    5.1  5  PF00036.27 EF hand
     0.0017   17.9   0.0         12    5.9   0.0    4.6  5  PF13405.1  EF-hand domain
     0.0067   16.6   7.0      0.057   13.6   0.8    2.4  2  PF10235.4  Microtubule-associated protein CRIPT
  ------ inclusion threshold ------
       0.09   12.3   4.3      0.047   13.2   1.3    1.7  2  PF07282.6  Putative transposase DNA-binding domain
        0.4   10.4  10.3        1.3    8.8   1.4    2.0  3  PF12773.2  Double zinc ribbon
        4.7    6.7   6.1        1.4    8.4   2.0    1.8  2  PF07699.8  GCC2 and GCC3


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0071        11      10      52 ..      97     136 ..      91     138 .. 0.77
   2 !   13.9   0.0   1.9e-05     0.028       2      49 ..     263     309 ..     263     313 .. 0.92
   3 !   11.7   0.0   8.9e-05      0.14       4      50 ..     354     400 ..     351     403 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0071
   PF13833.1  10 LkralallglkglseeevdilfrefD..tdgdGkisfeEFcvlle 52 
                 L    + lg+  l++ee++ +f ++   +  dG ++++E ++ll 
  MMETSP1325-20131115|3427_1  97 L----RRLGVV-LTDEEFERVFAVIPhhRTSDGSVDYMELYNLLL 136
                 3....336777.99999999999998445569*******999885 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 1.9e-05
   PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcv 49 
                 +G+I+  +L+  l+ +g+  l++ ++ ++ + fD+ g+G++++  Fc+
  MMETSP1325-20131115|3427_1 263 RGVISVFDLQTVLNQMGVT-LTAMDLAAIRSRFDRTGNGMLDYVSFCR 309
                 5899999****99667999.***************************6 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 8.9e-05
   PF13833.1   4 lItreeLkralallglkglseeevdilfrefDtdgd.GkisfeEFcvl 50 
                  ++   +++al+ lg++ l+e +  +l ++f + g+ ++is++EF+++
  MMETSP1325-20131115|3427_1 354 FVSLLQFREALRQLGVP-LTEAQTSTLCNKFAQAGNpNMISYDEFLEF 400
                 5555569****889***.****************999********986 PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.5   2.5e-08   3.8e-05       3      29 ..     597     624 ..     596     625 .. 0.96

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.5e-08
  PF00641.13   3 gdWdCskCl.vqNfawstkCvaCqapkp 29 
                 g+W C +Cl ++N+  s++C +C+ap+p
  MMETSP1325-20131115|3427_1 597 GRWMCLTCLyYDNEEGSPECAMCGAPNP 624
                 89************************98 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.5   2.4e+03      14      26 ..     123     135 ..      97     139 .. 0.69
   2 !    6.4   0.0    0.0059         9       2      62 ..     250     307 ..     249     323 .. 0.76
   3 !   13.4   0.0   3.8e-05     0.058       5      65 ..     343     400 ..     333     401 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.5
   PF13499.1  14 dgyldkeeLlrll 26 
                 dg++d+ eL +ll
  MMETSP1325-20131115|3427_1 123 DGSVDYMELYNLL 135
                 6666666666655 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0059
   PF13499.1   2 lkeaFkl.lDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEf 62 
                 l++ F++ +D    g +++ +L+ +l+++g  l+       l +i  ++D  g+G l++  f
  MMETSP1325-20131115|3427_1 250 LRRTFETtFDPGMRGVISVFDLQTVLNQMGVTLT----AMDLAAIRSRFDRTGNGMLDYVSF 307
                 77788777999999***************96655....333334466888888888887555 PP

  == domain 3    score: 13.4 bits;  conditional E-value: 3.8e-05
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 +F + D   +g+++   ++++l++lg +l++ ++ +++ ++ +  + n    +s++Efl++
  MMETSP1325-20131115|3427_1 343 VFVMNDPRDSGFVSLLQFREALRQLGVPLTEAQTSTLCNKFAQAGNPN---MISYDEFLEF 400
                 68888999*****************************77777777777...********98 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.38   5.7e+02      14      26 ..     123     135 ..     120     137 .. 0.85
   2 ?   -2.1   0.0       1.8   2.7e+03       9      28 ..     258     277 ..     257     278 .. 0.77
   3 ?    4.1   0.0      0.02        31       6      23 ..     291     308 ..     286     309 .. 0.79
   4 ?    4.5   0.0     0.014        21       2      28 ..     340     366 ..     339     367 .. 0.88
   5 ?    2.7   0.0     0.054        83      17      26 ..     392     401 ..     390     404 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.38
                 SSEBEHHHHHHHH CS
  PF00036.27  14 dGkIsfeEfkeal 26 
                 dG +++ E+ ++l
  MMETSP1325-20131115|3427_1 123 DGSVDYMELYNLL 135
                 9*******98776 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.8
                 HCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   9 fDkDgdGkIsfeEfkealkk 28 
                 fD    G Is+ +++++l+ 
  MMETSP1325-20131115|3427_1 258 FDPGMRGVISVFDLQTVLNQ 277
                 56666799999999998875 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.02
                 HHHHCTTTSSEBEHHHHH CS
  PF00036.27   6 FkefDkDgdGkIsfeEfk 23 
                  + fD+ g+G +++  f+
  MMETSP1325-20131115|3427_1 291 RSRFDRTGNGMLDYVSFC 308
                 578**********97665 PP

  == domain 4    score: 4.5 bits;  conditional E-value: 0.014
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++ +F + D   +G++s+  f+eal+ 
  MMETSP1325-20131115|3427_1 340 VRFVFVMNDPRDSGFVSLLQFREALRQ 366
                 678899999999************986 PP

  == domain 5    score: 2.7 bits;  conditional E-value: 0.054
                 BEHHHHHHHH CS
  PF00036.27  17 IsfeEfkeal 26 
                 Is++Ef+e++
  MMETSP1325-20131115|3427_1 392 ISYDEFLEFV 401
                 9******987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       0.9   1.4e+03      12      26 ..     121     135 ..     118     142 .. 0.86
   2 ?    3.1   0.0     0.066     1e+02       9      28 ..     258     277 ..     253     285 .. 0.88
   3 ?    1.7   0.0      0.18   2.7e+02       8      21 ..     293     306 ..     292     309 .. 0.82
   4 !    5.9   0.0    0.0081        12       3      30 ..     341     367 ..     339     372 .. 0.82
   5 ?   -3.0   0.0         6   9.1e+03      16      26 ..     391     401 ..     387     405 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.9
                 -----B---HHHHHH CS
   PF13405.1  12 dgdGkidaeELrdaL 26 
                 + dG +d  EL ++L
  MMETSP1325-20131115|3427_1 121 TSDGSVDYMELYNLL 135
                 569********9887 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.066
                 C-------B---HHHHHHH. CS
   PF13405.1   9 fDkdgdGkidaeELrdaLrk 28 
                 fD    G i+  +L+ +L++
  MMETSP1325-20131115|3427_1 258 FDPGMRGVISVFDLQTVLNQ 277
                 899999************95 PP

  == domain 3    score: 1.7 bits;  conditional E-value: 0.18
                 CC-------B---H CS
   PF13405.1   8 lfDkdgdGkidaeE 21 
                  fD++g+G +d   
  MMETSP1325-20131115|3427_1 293 RFDRTGNGMLDYVS 306
                 59********9765 PP

  == domain 4    score: 5.9 bits;  conditional E-value: 0.0081
                 H---GCC-------B---HHHHHHH.H- CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLrksl 30 
                 r +F + D   +G++++ ++r aLr+ l
  MMETSP1325-20131115|3427_1 341 RFVFVMNDPRDSGFVSLLQFREALRQ-L 367
                 56677778778**************4.5 PP

  == domain 5    score: -3.0 bits;  conditional E-value: 6
                 -B---HHHHHH CS
   PF13405.1  16 kidaeELrdaL 26 
                  i+ +E++ + 
  MMETSP1325-20131115|3427_1 391 MISYDEFLEFV 401
                 69999*98775 PP

>> PF10235.4  Microtubule-associated protein CRIPT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.8   3.7e-05     0.057      37      78 ..     576     623 ..     570     634 .. 0.77
   2 !    6.3   0.5    0.0071        11      60      84 ..     634     662 ..     623     666 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.7e-05
   PF10235.4  37 knpyaaysskckiCktkveq.gskyCqkCaYkkg.....aCamCGkkl 78 
                 ++p++++ +   + ++k++q g+  C +C Y ++      CamCG   
  MMETSP1325-20131115|3427_1 576 QTPLGSKGKVPASMQQKLQQqGRWMCLTCLYYDNeegspECAMCGAPN 623
                 567777766666778888888**********999777778*****873 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0071
   PF10235.4  60 yCqkCaYkkg....aCamCGkkletkslk 84 
                  C +C +++     +CamC k l++ +++
  MMETSP1325-20131115|3427_1 634 ECWNCFHRNAefaeICAMCNKPLNGPQAS 662
                 388886654344449*******9886655 PP

>> PF07282.6  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0       8.5   1.3e+04      24      32 ..     373     381 ..     371     383 .. 0.81
   2 ?   13.2   1.3   3.1e-05     0.047       3      58 ..     588     641 ..     587     645 .. 0.90

  Alignments for each domain:
  == domain 1    score: -4.2 bits;  conditional E-value: 8.5
   PF07282.6  24 payTSktCs 32 
                 +a TS+ C+
  MMETSP1325-20131115|3427_1 373 EAQTSTLCN 381
                 788***997 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 3.1e-05
   PF07282.6   3 klqeqleykakeyGikvievnpayTSktCsvCgsknkealsgrlfkCpnCgfeadr 58 
                 ++q++l+++ ++  ++  + + +  S +C+ Cg+ n +  ++  ++ ++C+  ++r
  MMETSP1325-20131115|3427_1 588 SMQQKLQQQGRWMCLTCLYYDNEEGSPECAMCGAPNPK--HKSSVVQQECWNCFHR 641
                 68999*********************************..8888888889988888 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.8     0.018        27      21      50 .]     592     620 ..     589     620 .. 0.84
   2 ?    8.2   7.2    0.0012       1.9       7      49 ..     608     652 ..     601     653 .. 0.83
   3 ?    8.8   1.4   0.00084       1.3       1      25 [.     635     659 ..     635     669 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.018
   PF12773.2  21 klkeataeevlCpsCges.vspkarfCpnCG 50 
                 kl+  ++ + +C +C +  ++++++ C  CG
  MMETSP1325-20131115|3427_1 592 KLQ--QQGRWMCLTCLYYdNEEGSPECAMCG 620
                 566..555689******77***********9 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0012
   PF12773.2   7 enpsgarfCpqCgaklk..eataeevlCpsCgesvspkarfCpnC 49 
                 +n++g+  C  Cga+ +  ++   ++ C +C +++ + a++C  C
  MMETSP1325-20131115|3427_1 608 DNEEGSPECAMCGAPNPkhKSSVVQQECWNCFHRNAEFAEICAMC 652
                 4899999**********8855556778****************99 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.00084
   PF12773.2   1 CpqCgaenpsgarfCpqCgaklkea 25 
                 C +C + n + a+ C  C+++l+++
  MMETSP1325-20131115|3427_1 635 CWNCFHRNAEFAEICAMCNKPLNGP 659
                 99********************933 PP

>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.0   0.00091       1.4      11      48 .]     601     635 ..     594     635 .. 0.84
   2 ?   -2.7   0.0       2.6     4e+03       9      15 ..     647     653 ..     639     656 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00091
   PF07699.8  11 CepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 C  C   +Y neeg+ +C +C++    ++k s  +++C
  MMETSP1325-20131115|3427_1 601 CLTCL--YYDNEEGSPECAMCGAP-NPKHKSSVVQQEC 635
                 55554..8***************9.5899999988888 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 2.6
   PF07699.8   9 kkCepCp 15 
                 ++C +C 
  MMETSP1325-20131115|3427_1 647 EICAMCN 653
                 4566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.04u 0.38s 00:00:01.42 Elapsed: 00:00:00.63
# Mc/sec: 2658.82
//
Query:       MMETSP1325-20131115|3428_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0033   17.0   1.5      0.005   16.5   1.1    1.3  1  PF07716.10 Basic region leucine zipper
  ------ inclusion threshold ------
      0.018   14.5   0.4      0.022   14.1   0.3    1.2  1  PF10224.4  Predicted coiled-coil protein (DUF2205)
       0.02   14.3   0.1      0.024   14.1   0.1    1.1  1  PF04156.9  IncA protein
      0.021   14.0   1.7      0.032   13.5   1.2    1.3  1  PF10393.4  Trimeric coiled-coil oligomerisation domain of matrilin
      0.027   13.7   0.0      0.033   13.5   0.0    1.2  1  PF04977.10 Septum formation initiator
      0.038   13.3   0.4       0.06   12.7   0.3    1.3  1  PF06305.6  Protein of unknown function (DUF1049)
       0.06   13.2   0.3      0.073   12.9   0.2    1.2  1  PF12443.3  AT-hook-containing transcription factor
      0.064   12.5   0.5      0.078   12.2   0.3    1.1  1  PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
      0.069   12.9   1.2      0.098   12.4   0.8    1.2  1  PF05377.6  Flagella accessory protein C (FlaC)
      0.071   12.9   1.7       0.12   12.1   1.2    1.4  1  PF14197.1  Centrosome localisation domain of PPC89
       0.12   11.6   0.0       0.12   11.6   0.0    1.1  1  PF04555.8  Restriction endonuclease XhoI


Domain annotation for each model (and alignments):
>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   1.1     4e-06     0.005      26      52 ..      40      66 ..      37      67 .] 0.93

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 4e-06
  PF07716.10 26 keeeleervkeLeeeNaqLrqkveqLe 52
                +  +le++vk+Lee+ ++L ++ve++e
  MMETSP1325-20131115|3428_1 40 RARQLEMEVKNLEEKLDELSTRVESME 66
                7889********************998 PP

>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   1.8e-05     0.022      20      44 ..      43      67 .]      30      67 .] 0.86

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.8e-05
   PF10224.4 20 rlieqvleLqdsLedLseRveaVke 44
                +l  +v++L + L++Ls+Rve+ +e
  MMETSP1325-20131115|3428_1 43 QLEMEVKNLEEKLDELSTRVESMEE 67
                68899****************9886 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   1.9e-05     0.024      45     102 ..      16      67 .]      14      67 .] 0.89

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.9e-05
   PF04156.9  45 liAlgvvLlalgllllllkapvqseedekieesrlqeelsesesqlseleeeleqlee 102
                  +A + +++++g + ll++ +++ ++++++e      e++++e+ l+el + +e +ee
  MMETSP1325-20131115|3428_1  16 GLA-ATLCIGFGSAILLEQFRKPYRRARQLEM-----EVKNLEEKLDELSTRVESMEE 67 
                 455.689999*****************99988.....*************99999986 PP

>> PF10393.4  Trimeric coiled-coil oligomerisation domain of matrilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.2   2.5e-05     0.032      22      43 ..      45      66 ..      42      67 .] 0.90

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.5e-05
   PF10393.4 22 eeeiqkLtqKLeavtkrLealE 43
                e e++ L  KL++ + r+e +E
  MMETSP1325-20131115|3428_1 45 EMEVKNLEEKLDELSTRVESME 66
                679*****************99 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.7e-05     0.033      11      44 ..      33      66 ..      23      67 .] 0.88

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.7e-05
  PF04977.10 11 fgksgllalyqlkqeiaalqaelaklkaeneeLe 44
                ++ +++++ +ql+ e++ l+++l++l+ + e++e
  MMETSP1325-20131115|3428_1 33 QFRKPYRRARQLEMEVKNLEEKLDELSTRVESME 66
                6778999***********************9998 PP

>> PF06305.6  Protein of unknown function (DUF1049)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3   4.8e-05      0.06      24      67 ..      17      58 ..      14      59 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.8e-05
   PF06305.6 24 lliafllGallglLlsvlfllklrrqlrrlqkqlkklekeldql 67
                l++++ +G+  ++Ll    + k +r++r+l+ ++k+le++ld+l
  MMETSP1325-20131115|3428_1 17 LAATLCIGFGSAILLE--QFRKPYRRARQLEMEVKNLEEKLDEL 58
                5556666665555444..466899******************98 PP

>> PF12443.3  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   5.8e-05     0.073      45      70 ..      39      64 ..      29      67 .] 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.8e-05
   PF12443.3 45 qkirelkaeiykLkeqleeLkekvde 70
                 + r+l+ e++ L e+l+eL ++v+ 
  MMETSP1325-20131115|3428_1 39 RRARQLEMEVKNLEEKLDELSTRVES 64
                5789*******************986 PP

>> PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   6.3e-05     0.078      20      56 ..      30      66 ..      27      67 .] 0.94

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6.3e-05
   PF10018.4 20 eleehqenqarikeLraeaeslDeqikdilkeLkear 56
                +le++++ ++r ++L+ e+++l+e++ ++ + + +++
  MMETSP1325-20131115|3428_1 30 LLEQFRKPYRRARQLEMEVKNLEEKLDELSTRVESME 66
                5899****************************99998 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.8   7.9e-05     0.098      11      35 ..      43      67 .]      40      67 .] 0.92

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.9e-05
   PF05377.6 11 klstvvatvrkeleelsksvekike 35
                +l+++v++++++l+els+ ve ++e
  MMETSP1325-20131115|3428_1 43 QLEMEVKNLEEKLDELSTRVESMEE 67
                699******************9986 PP

>> PF14197.1  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.2   9.9e-05      0.12       2      25 ..      43      66 ..      42      67 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 9.9e-05
   PF14197.1  2 rLeaevktLrnrldsltrkvqvhe 25
                 Le evk L+++ld+l+++v++ e
  MMETSP1325-20131115|3428_1 43 QLEMEVKNLEEKLDELSTRVESME 66
                69******************9876 PP

>> PF04555.8  Restriction endonuclease XhoI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.9e-05      0.12      86     121 ..       2      38 ..       1      53 [. 0.89

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.9e-05
   PF04555.8  86 sfGnnfnnraeealGtatdlwvafrekafgeql.rPf 121
                  fG  +n+r+e+ lG a  l + f   ++ eq  +P+
  MMETSP1325-20131115|3428_1   2 NFGASLNERSEKMLGLAATLCIGFGSAILLEQFrKPY 38 
                 59**********************9999888763566 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       797  (0.0582943); expected 273.4 (0.02)
Passed bias filter:                      688  (0.0503218); expected 273.4 (0.02)
Passed Vit filter:                       129  (0.00943534); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 349.03
//
Query:       MMETSP1325-20131115|3424_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-25   88.4   6.5    1.2e-13   50.4   0.2    3.2  3  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   3.9e-06     0.053       8      89 ..      30     121 ..      25     128 .. 0.63
   2 !   27.4   0.1   1.3e-10   1.8e-06      11      92 ..     145     222 ..     139     225 .. 0.75
   3 !   50.4   0.2   8.9e-18   1.2e-13       3      93 ..     229     314 ..     227     317 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.9e-06
                 HHH----HHHCCHHHCHHHHHHHHHHH......-SS--GCGS----HHHHHHHHHH--....-GGGG---HHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   8 sllaGaiAgaiaalvttPldvvKtrlq......ksaasasskykgildalkkiykeeG....irglyrGllpnllrvvpaaaikfvtyetlk 89 
                 +++ +a+Ag+ + l+ +P+d+v  rl+         +s +    ++ +a+ k   + G    +++l+ Gl+      +++++ kf+   ++k
  MMETSP1325-20131115|3424_1  30 RVFGSAVAGVSELLIFHPVDTVAKRLMmtekslIVPSSLAATSGNLNQAIFKEAASVGffakWQSLFPGLGFGAGYKILQRVYKFGGQPYVK 121
                 567789****************9999988866634444444444555555555555564444455555555555555555555555555555 PP

  == domain 2    score: 27.4 bits;  conditional E-value: 1.3e-10
                 ----HHHC...CHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22  11 aGaiAgai...aalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                 ++a+Ag i   + ++  Pldv+K+r q  ++ +s + +g++    +i++eeG+ +lyrG + +  r++p +   f+     k+l+
  MMETSP1325-20131115|3424_1 145 MAATAGSImgvGEIALLPLDVLKIRSQ--TNPESLQGRGVV----QIFREEGL-ALYRGAGWTAARNAPGSFSLFGGAALSKQLM 222
                 44444443222678999**********..444444445554....6699***7.8******************999888887765 PP

  == domain 3    score: 50.4 bits;  conditional E-value: 8.9e-18
                 HHHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH- CS
  PF00153.22   3 lsvlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkklls 93 
                  ++ ++++a++++++++ +v +Pldv+Ktrlq     ++++  +   +l ++ ++eG+ +++rGl+p+ll v p+ ++ f++ +++  +++
  MMETSP1325-20131115|3424_1 229 ATWTQDAIASVAGATASITVAAPLDVIKTRLQ-----SGTSTESGSTILFNLARTEGPGAFFRGLWPKLLVVGPKLVFSFTVAQQMIGVFE 314
                 67899999*99999******************.....555555556677789******************************999987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 1503.60
//
Query:       MMETSP1325-20131115|3429_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-16   60.3   1.9    1.8e-16   60.0   1.3    1.1  1  PF03151.11 Triose-phosphate Transporter family
    4.6e-06   26.5   0.8    6.2e-06   26.1   0.6    1.3  1  PF00892.15 EamA-like transporter family
     0.0052   15.6   0.1     0.0071   15.1   0.1    1.2  1  PF06027.7  Eukaryotic protein of unknown function (DUF914)
  ------ inclusion threshold ------
      0.055   12.5   0.1       0.07   12.1   0.1    1.1  1  PF04142.10 Nucleotide-sugar transporter
        0.1   12.6   2.8       0.13   12.3   1.9    1.3  1  PF13536.1  Multidrug resistance efflux transporter


Domain annotation for each model (and alignments):
>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   1.3   6.5e-20   1.8e-16      40     152 ..       6     114 ..       2     115 .. 0.88

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 6.5e-20
  PF03151.11  40 iylspvafivllvvlllvegpklgkesssiksldlssivryvlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGvvlYs 152
                 + l+++++ vll+ +ll eg     +++++          +v  ll  g++++++n + f +l + S++++ va+ +krv+++ ++v+++g+++t ++ +G  ia++Gv +Ys
  MMETSP1325-20131115|3429_1   6 ALLTCCSASVLLLPSLLAEGRPALAAFQAMGDG----QMTFVRDLLRCGFFYYAYNEMGFRVLDMLSQVSAAVANSAKRVVILFAAVVFLGEHVTRQKLVGSTIAIAGVTMYS 114
                 567788888888888888888867777666663....34789999999****************************************************************8 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.6   2.3e-09   6.2e-06      54     125 ..      44     114 ..       3     115 .. 0.70

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 2.3e-09
  PF00892.15  54 lallllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvllll 125
                   ll +g+++   ++ + f  l  +s + a++ +s+  v++++++v++lge +t ++l+g  ++++Gv + +
  MMETSP1325-20131115|3429_1  44 RDLLRCGFFY-YAYNEMGFRVLDMLSQVSAAVANSAKRVVILFAAVVFLGEHVTRQKLVGSTIAIAGVTMYS 114
                 4444444442.444444455599*********************************************9875 PP

>> PF06027.7  Eukaryotic protein of unknown function (DUF914)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   2.6e-06    0.0071     107     167 ..      70     130 ..      58     137 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.6e-06
   PF06027.7 107 tsvqLLDcfaipvvlvLswlfLkvrYrlvkilgvviCilGvvlvvvaDvlagkradsgsnk 167
                 +s+ + +++  +v+l+ + +fL  +    k++g +i i+Gv++  va ++ag+ra+ g+ +
  MMETSP1325-20131115|3429_1  70 VSAAVANSAKRVVILFAAVVFLGEHVTRQKLVGSTIAIAGVTMYSVAKAMAGRRAKEGKAP 130
                 5677778888899999***************************************887765 PP

>> PF04142.10  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   2.6e-05      0.07      25     103 ..      51     130 ..      39     141 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.6e-05
  PF04142.10  25 liYtlqNnllyvalsnldaatyqvtyqlkilttAlfsvllLkrkLstlqWasllllvlgvvlvqlkqkes.eaekkreae 103
                 + Y   N + + +l+ l    + v    k +   + +v++L+ ++++++ +  ++ ++gv++  ++++++ ++ k+ +a 
  MMETSP1325-20131115|3429_1  51 FFYYAYNEMGFRVLDMLSQVSAAVANSAKRVVILFAAVVFLGEHVTRQKLVGSTIAIAGVTMYSVAKAMAgRRAKEGKAP 130
                 789999******************9999999999999***************************9999995555555554 PP

>> PF13536.1  Multidrug resistance efflux transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.9   4.6e-05      0.13      43     109 ..      49     118 ..       5     122 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.6e-05
   PF13536.1  43 lgfglfyalltlAakhap.g.lvaaita.l.tpllaallslllfkeklpkrellaslliliGvvlmqveea 109
                 +gf ++ya    +  ++  + +v+a++a     ++  + ++++++e+++   l+ s ++++Gv +  v +a
  MMETSP1325-20131115|3429_1  49 CGF-FYYAYNEMGFRVLDmLsQVSAAVAnSaKRVVILFAAVVFLGEHVTRQKLVGSTIAIAGVTMYSVAKA 118
                 344.6677777788887655577755442435566666677788********************9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.63
# Mc/sec: 562.95
//
Query:       MMETSP1325-20131115|3432_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.2   10.8   5.4       0.31   10.2   3.8    1.3  1  PF05308.6 Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.8   2.3e-05      0.31     178     223 ..      37      87 ..      11      97 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 2.3e-05
   PF05308.6 178 sdpteepelevp......pppppPpPlpavslqqsasaielikerkekksae 223
                 s++ + p  +++      +ppppPpPl++ + ++s+ a +  +++ ++++++
  MMETSP1325-20131115|3432_1  37 SQVIAVPAPSSSpgpfqlSPPPPPPPLQI-ASERSVPAQQPSQQHPMHQHER 87 
                 33333333333334444478888888887.4567777777777777733333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 829.51
//
Query:       MMETSP1325-20131115|3412_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-29  101.8   0.6    3.8e-29  101.3   0.0    1.6  2  PF08719.6 Domain of unknown function (DUF1768)


Domain annotation for each model (and alignments):
>> PF08719.6  Domain of unknown function (DUF1768)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.18   2.4e+03      36      36 ..      44      44 ..      10      98 .. 0.54
   2 !  101.3   0.0   2.8e-33   3.8e-29       5     131 ..     122     247 ..     118     254 .] 0.93

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.18
   PF08719.6 36 q 36
                 
  MMETSP1325-20131115|3412_1 44 R 44
                1 PP

  == domain 2    score: 101.3 bits;  conditional E-value: 2.8e-33
   PF08719.6   5 raeeeygilSnlypspftvdgvkfptaehymqaqKallfedeeaaakilaaespkeakklgrkvpnfdearkdWekvkeevvvegllakfeqnee.lrelLlsTgdrelveaspsDrvWGiglnaesa 131
                 ++++++g+lSn+++s+f++dg  f++ae+y+++ Ka l+ d+e+a++i+ +++p+++kklgr v  ++ ++  W ++ e+v + + +akf qn+e l   L++T  ++l easps +v+Gigl  +++
  MMETSP1325-20131115|3412_1 122 EHTDNNGYLSNWARSTFELDGRVFTSAEQYIMWSKATLMGDQESAENIMGTQNPAQQKKLGRAVHPWKRKI--WARHMEDVQLCAAMAKFGQNRElLGAWLVRTVPKRLAEASPSETVFGIGLAPSDP 247
                 7889***********************************************************99898888..*******************99977899***********************96665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       661  (0.048347); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.33s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 1242.19
//
Query:       MMETSP1325-20131115|3433_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.051   12.7   0.1      0.073   12.1   0.1    1.2  1  PF08690.5  GET complex subunit GET2
       0.42    9.5   8.6        0.4    9.6   6.0    1.1  1  PF06213.7  Cobalamin biosynthesis protein CobT
       0.83    7.3  14.9       0.81    7.3  10.4    1.1  1  PF04147.7  Nop14-like family
        1.2    7.2   5.3        1.1    7.3   3.7    1.0  1  PF03115.9  Astrovirus capsid protein precursor
          2    7.4   6.4        2.6    7.0   4.4    1.2  1  PF01056.13 Myc amino-terminal region
        2.3    6.2   0.0        2.3    6.2   0.0    2.0  2  PF10156.4  Subunit 17 of Mediator complex
        2.6    7.7  12.4        2.6    7.7   8.6    1.1  1  PF03153.8  Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> PF08690.5  GET complex subunit GET2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   3.7e-05     0.073      11      76 ..      57     125 ..      55     144 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.7e-05
   PF08690.5  11 LRErRqaKfskGkAseRLnkIlsQgssvklss..ksvldekkeketetaksaess.dkddpeiqdilev 76 
                 L Er++ K+s G A+  +++ l   + v +++  + v d+++ ke + + ++++  +++d e +d++ +
  MMETSP1325-20131115|3433_1  57 LMERKRYKMSWGPATVFIHRRLNHDKTVFSNEqlQDVPDDDSYKEYDDTYESSDEdEEEDDEEKDLDLA 125
                 569************999999999999999888877888877777666555544315666666665433 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.0   0.00021       0.4     200     248 ..      91     139 ..      24     144 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00021
   PF06213.7 200 rdmlsklelaeelgdeeessdseekr.dedddkedeeddaseeeesgdsd 248
                 +d+ ++ +  +e+ d  essd++e++ de++d +  + d++eee+ +d++
  MMETSP1325-20131115|3433_1  91 QDVPDD-DSYKEYDDTYESSDEDEEEdDEEKDLDLADYDDGEEEDGEDDQ 139
                 444444.5556666666666666665223333333444444444444333 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  10.4   0.00042      0.81     322     383 ..      79     139 ..      23     145 .. 0.65

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00042
   PF04147.7 322 edddenfglgsaeeeeeeeeeegvededeeeddddeeeeeedvdedeeeedeedeesddeee 383
                 + d+  f +++ ++  ++++  ++ d+  e++d+deee++e+ d+d  + d+ +ee+ ++++
  MMETSP1325-20131115|3433_1  79 NHDKTVFSNEQLQDVPDDDS-YKEYDDTYESSDEDEEEDDEEKDLDLADYDDGEEEDGEDDQ 139
                 44456666665555555555.77778888888888886777777766554444444444433 PP

>> PF03115.9  Astrovirus capsid protein precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   3.7   0.00056       1.1     646     706 ..      80     139 ..      30     145 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00056
   PF03115.9 646 eekaelseleeravedaeepaedlvseeetdtetestedesdeldrfdlkassgseseded 706
                 ++k+ +s+ + ++v  + +++++  ++ e+  e+e+++de+ +ld  d  ++++++ ed++
  MMETSP1325-20131115|3433_1  80 HDKTVFSNEQLQDVP-DDDSYKEYDDTYESSDEDEEEDDEEKDLDLADYDDGEEEDGEDDQ 139
                 444444443333333.222222222333334444444444445555555555555555543 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.4    0.0013       2.6     211     252 ..      89     130 ..      66     143 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0013
  PF01056.13 211 vlrtspnsssssgedseseeeeeeeeeeeeeeeiDvvtvekr 252
                 +l+  p+  s ++ d   e+++e+eee++ee ++D   ++  
  MMETSP1325-20131115|3433_1  89 QLQDVPDDDSYKEYDDTYESSDEDEEEDDEEKDLDLADYDDG 130
                 344555555666666666999999999999999998776665 PP

>> PF10156.4  Subunit 17 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0012       2.3     320     346 ..      12      38 ..       6      44 .. 0.85
   2 ?   -2.5   4.8      0.54     1e+03      58      96 ..      88     135 ..      80     145 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0012
   PF10156.4 320 kqiekarntlFekELFhqlkrEArqli 346
                  ++ +a  t F+ +L+ q+++ A +l 
  MMETSP1325-20131115|3433_1  12 GDLVFANSTCFDDDLMEQMSKQAERLS 38 
                 47888999***************9985 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.54
   PF10156.4  58 esLqeeiakeaakkeeskesdekekdeedenkee.........eeeke 96 
                 e+Lq+ ++++  k+ ++  ++++e++eed+++++         eee+ 
  MMETSP1325-20131115|3433_1  88 EQLQDVPDDDSYKEYDDTYESSDEDEEEDDEEKDldladyddgEEEDG 135
                 677777777777777777777777777777644455555555533333 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   8.6    0.0014       2.6     258     305 ..      92     139 ..      19     143 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0014
                 XXXXXXXXXXXXX.XXXXXXXXXXXXXX--------------------- CS
   PF03153.8 258 DGagddssdesee.deeadedeeekdkvieeDlddseDDvseedeedld 305
                 D ++dds++e ++  e  dedeee+d++ + Dl d  DD  eed+ed++
  MMETSP1325-20131115|3433_1  92 DVPDDDSYKEYDDtYESSDEDEEEDDEEKDLDLAD-YDDGEEEDGEDDQ 139
                 78899999988888788889998888888888888.7887788888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       679  (0.0496635); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.41s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 647.90
//
Query:       MMETSP1325-20131115|3434_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|3435_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-10   38.3   0.5    1.4e-09   37.7   0.3    1.3  1  PF12695.2  Alpha/beta hydrolase family
    2.5e-09   37.2   5.0    2.5e-09   37.2   3.5    1.4  1  PF12697.2  Alpha/beta hydrolase family
      5e-08   32.3   0.1    4.5e-05   22.6   0.0    2.1  2  PF00326.16 Prolyl oligopeptidase family
    5.6e-07   29.2   1.2    3.3e-06   26.7   0.1    2.1  2  PF07859.8  alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.015   14.3   0.0       0.14   11.2   0.0    2.0  2  PF03583.9  Secretory lipase
      0.022   14.0   0.0        1.7    7.9   0.0    2.1  2  PF02230.11 Phospholipase/Carboxylesterase
      0.032   13.6   0.1      0.055   12.8   0.0    1.3  1  PF01764.20 Lipase (class 3)
       0.04   13.3   0.1      0.085   12.3   0.1    1.5  1  PF07819.8  PGAP1-like protein
      0.053   12.9   0.0        0.2   11.0   0.0    1.8  2  PF00561.15 alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.3   9.3e-13   1.4e-09      55     141 ..      18     185 ..       4     186 .. 0.76

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 9.3e-13
   PF12695.2  55 ldleriilvGhSlGGgvalelag................................rddrvkglvllapfpdgedlakltl.......................................................pvllihGtrDgvvppeeaeklakalp....gdaelvviegasH 141
                  ++ r++lvGhS GG++++++a                                 r++  +g+ ll+p+                                                                  p+ll+hG  D+ vpp ++e++++ l     +++++v++   +H
  MMETSP1325-20131115|3435_1  18 REAPRVVLVGHSSGGHLVTTVALrhamrrttptlrlpdivgvctlsapfdllrhhRYEAMRGVHLLSPM----------TaaacdakgmgmaklhsqsrsgkatdsvrhvaralvrssplrtasllsaeearrvpPMLLVHGVLDTTVPPGQMEAMRSVLLgrgvAAVDMVWLTTLDH 185
                 3778*****************************966666666666666666666544555556666653..........0333333344445556688888888888999999999999999999999999************************77765545568888899988888 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   3.5   1.6e-12   2.5e-09      65     214 ..      19     184 ..       4     189 .. 0.65

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 1.6e-12
                 ..--EEEE--------HHHHHH----...........EEEEEEE------STT..---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH--GGGG....GG------HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTT.....EEEEE---SS CS
   PF12697.2  65 l.rpvvlvGHSlGgavalaaaarrpd..........lvrglvlidppgplpas..alrpagpsllrrllagraaalrdlaarafarlfdgdelealvradaaalaellraalldadlrealarldvPvlviageaDrvvppeearrlaealpg.....arvvvlpgag 214
                   ++vvlvGHS Gg +++ +a r+            ++ g+  +++p++l +   ++  +g +ll+ + a+ a  ++++  ++++ +  +    + vr+ a+al++     ++ ++l+++ ar   P+l+++g  D +vpp ++++++  l g     +++v+l   +
  MMETSP1325-20131115|3435_1  19 EaPRVVLVGHSSGGHLVTTVALRHAMrrttptlrlpDIVGVCTLSAPFDLLRHhrYEAMRGVHLLSPMTAA-ACDAKGMGMAKLHSQSRSGKATDSVRHVARALVRSSPL-RTASLLSAEEARRVPPMLLVHGVLDTTVPPGQMEAMRSVLLGrgvaaVDMVWLTTLD 184
                 1489*****************77666667777777778888888888865554442221222222222222.22233444444555555555667777788888877766.6667777777777799*****************999876543233335555555555 PP

>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0011       1.6      61      85 ..      18      42 ..       6      45 .. 0.82
   2 !   22.6   0.0     3e-08   4.5e-05     138     192 ..     135     190 ..     110     199 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0011
                --GGGEEE--------HHHHHHHH- CS
  PF00326.16 61 vdpdrlaitGgSyGGylvgaalnqr 85
                  + r+++ G+S GG+lv +++ ++
  MMETSP1325-20131115|3435_1 18 REAPRVVLVGHSSGGHLVTTVALRH 42
                56779**************999855 PP

  == domain 2    score: 22.6 bits;  conditional E-value: 3e-08
                 GG-------EEEEEETT-SSS-THHHHHHHHHHH..--S.EEEEEES--------- CS
  PF00326.16 138 adnvkaypplllihGeeDdrvppaealklvaaLqkagkn.vlllifpdegHgigkp 192
                 a++ ++ pp+ll+hG +D+ vpp + + + + L  +g+  v++++ +  +H + +p
  MMETSP1325-20131115|3435_1 135 AEEARRVPPMLLVHGVLDTTVPPGQMEAMRSVLLGRGVAaVDMVWLTTLDHAAFRP 190
                 4444589********************************************87665 PP

>> PF07859.8  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.1   2.2e-09   3.3e-06      69     183 ..      19     158 ..       3     179 .. 0.71
   2 ?    1.3   0.0      0.13   1.9e+02     130     173 ..     178     220 ..     157     225 .. 0.77

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 2.2e-09
                 CCCEEEEE-------HHHHHHHHHHH-----...........................EEEEEEES----TS-CHHHHHH.THHC.TSTTSS-HHHHHHHHHHHSSGGGGGSTTTSGGGSS-HTT---EEEEEEEE-TTS--- CS
   PF07859.8  69 dpsrivvaGdSaGGnLaaavalrardegepe...........................iaaqvliyPgtdlertesesqelaeel.adgplltrdamdlfwrlylpeadrddplaspllasdlsglpptlvvvaelDplrdeg 183
                 ++ r+v++G S+GG+L++ valr + + ++                            ++++ l++P+t + +++ + +  a+ + ++     +d+++ ++r+ +  + ++  +as l a++ +++pp+l+v + lD+    g
  MMETSP1325-20131115|3435_1  19 EAPRVVLVGHSSGGHLVTTVALRHAMRRTTPtlrlpdivgvctlsapfdllrhhryeaMRGVHLLSPMTAA-ACDAKGMGMAKLHsQSRSGKATDSVRHVARALVRSSPLR--TASLLSAEEARRVPPMLLVHGVLDTTVPPG 158
                 3559*****************8777775333599***9999999999999999999999999999998866.555555544433423333344566777777766433333..677666667999*******99999877655 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.13
                 TSS-HHHHHHHHHHHSSGGGGGSTTTSGGGSS-HTT---EEEEE CS
   PF07859.8 130 plltrdamdlfwrlylpeadrddplaspllasdlsglpptlvvv 173
                  +lt+ + ++f  l+lp++++ddp ++ l++ +l++l+ +  ++
  MMETSP1325-20131115|3435_1 178 VWLTTLDHAAFRPLMLPHHHADDPGVQALWR-RLADLATATAIT 220
                 456777788899999999******9999999.677766655444 PP

>> PF03583.9  Secretory lipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.14   2.1e+02      64      83 ..      14      33 ..       8      44 .. 0.77
   2 ?   11.2   0.0     9e-05      0.14     192     266 ..     114     187 ..      70     195 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.14
   PF03583.9 64 vsgitsdakvalwGYsgGsl 83
                +  + ++++v+l G s G+ 
  MMETSP1325-20131115|3435_1 14 SGDLREAPRVVLVGHSSGGH 33
                5578999********98874 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 9e-05
   PF03583.9 192 gsdllkeeaikktleenkllvldksavPqiPvlvyhgvldeivpiadakklakswcdkgiasvefaedlingHla 266
                    + ++ + ++ l   +ll ++ +a    P+l++hgvld  vp  +++++++   ++g+a v  +  ++ +H a
  MMETSP1325-20131115|3435_1 114 VRHVARALVRSSPLRTASLLSAE-EARRVPPMLLVHGVLDTTVPPGQMEAMRSVLLGRGVAAVDMVWLTTLDHAA 187
                 45555566666777888887554.6677789*****************************999999999988875 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.016        24     102     125 ..      18      41 ..       5      53 .. 0.84
   2 ?    7.9   0.0    0.0011       1.7     150     200 ..     138     187 ..     114     193 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.016
  PF02230.11 102 ipssriiigGFSqGaalalylalt 125
                 +++ r++++G S G+ l++  al 
  MMETSP1325-20131115|3435_1  18 REAPRVVLVGHSSGGHLVTTVALR 41 
                 77889************9998876 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0011
  PF02230.11 150 atkvakipilqlHgeeDevvplalgkaakellktlln.kvelksyeglgHsi 200
                 a +v+  p+l++Hg  D +vp   ++a+  +l+ ++   v+++ ++ l H+ 
  MMETSP1325-20131115|3435_1 138 ARRVP--PMLLVHGVLDTTVPPGQMEAMRSVLLGRGVaAVDMVWLTTLDHAA 187
                 34444..99************************9999899999988888875 PP

>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.6e-05     0.055      63     104 ..      20      65 ..       3      67 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.6e-05
                 TSEEEEE-------HHHHHHHHHHHT-.......TTTEEEEEES-S CS
  PF01764.20  63 dykivvtGHSLGGalAlLaaadlaenglnk....sslvtvytfGqP 104
                   ++v++GHS GG l + +a+  a ++  +       v+v t+ +P
  MMETSP1325-20131115|3435_1  20 APRVVLVGHSSGGHLVTTVALRHAMRRTTPtlrlPDIVGVCTLSAP 65 
                 469***************9997776665545666666777776666 PP

>> PF07819.8  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   5.6e-05     0.085      82     122 ..      18      65 ..       5      75 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.6e-05
   PF07819.8  82 keptsviliGHSmGGlVArs.altlpnyik......dsvntivtlasP 122
                 +e  +v+l+GHS GG +  + al ++  +         +  + tl++P
  MMETSP1325-20131115|3435_1  18 REAPRVVLVGHSSGGHLVTTvALRHAMRRTtptlrlPDIVGVCTLSAP 65 
                 67789**********655540444443333445555445566666666 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00013       0.2      45      66 ..      18      43 ..       2      53 .. 0.80
   2 ?   -1.2   0.0      0.71   1.1e+03     177     197 ..     143     163 ..     133     168 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00013
                S....EEEEE-B---HHHHHHHHHCG CS
  PF00561.15 45 k....ltlvGhSmGGmialayaaeyp 66
                +    ++lvGhS GG +++++a+++ 
  MMETSP1325-20131115|3435_1 18 ReaprVVLVGHSSGGHLVTTVALRHA 43
                335559*****************995 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.71
                 SEEEEECCTTSCCHHCHHHHH CS
  PF00561.15 177 ptlvisgtdDplvpykasekl 197
                 p l+++g  D +vp+ ++e++
  MMETSP1325-20131115|3435_1 143 PMLLVHGVLDTTVPPGQMEAM 163
                 7899*************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1105.26
//
Query:       MMETSP1325-20131115|3436_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 831.08
//
Query:       MMETSP1325-20131115|3437_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 435.26
//
Query:       MMETSP1325-20131115|3440_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 435.26
//
Query:       MMETSP1325-20131115|3438_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 1306.59
//
Query:       MMETSP1325-20131115|3441_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0078   15.9   7.2     0.0078   15.9   5.0    1.0  1  PF08595.6  RXT2-like, N-terminal
  ------ inclusion threshold ------
      0.027   13.6  11.3      0.026   13.6   7.8    1.0  1  PF05432.6  Bone sialoprotein II (BSP-II)
      0.075   12.7   4.7      0.076   12.7   3.3    1.0  1  PF08564.5  Cdc37 C terminal domain
       0.14   11.5  13.8       0.13   11.6   9.5    1.1  1  PF03066.10 Nucleoplasmin
       0.43   10.7  14.2        0.4   10.8   9.9    1.2  1  PF09026.5  Centromere protein B dimerisation domain
       0.43    9.8   7.5       0.42    9.8   5.2    1.1  1  PF14283.1  Domain of unknown function (DUF4366)
       0.46    8.0  10.5        0.4    8.2   7.3    1.0  1  PF05086.7  Dictyostelium (Slime Mold) REP protein
       0.77    9.5  13.4       0.75    9.5   9.3    1.0  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
          1    7.8   7.4          1    7.8   5.2    1.0  1  PF07267.6  Nucleopolyhedrovirus capsid protein P87
        1.2    8.5  11.5        1.1    8.6   8.0    1.1  1  PF04546.8  Sigma-70, non-essential region
        2.6    6.5  15.3        2.3    6.6  10.6    1.0  1  PF10446.4  Protein of unknown function (DUF2457)
        2.7    7.9   7.0        2.8    7.8   4.9    1.1  1  PF05756.6  S-antigen protein
        3.3    6.6   9.6        3.1    6.7   6.7    1.0  1  PF01056.13 Myc amino-terminal region
        3.5    6.3   8.1        3.2    6.4   5.6    1.0  1  PF04514.7  Bluetongue virus non-structural protein NS2
        3.6    6.6   9.9        3.3    6.7   6.9    1.0  1  PF06524.7  NOA36 protein
        5.1    4.8   9.6        4.8    4.9   6.7    1.0  1  PF02724.9  CDC45-like protein
        5.8    6.3  11.8        6.3    6.1   8.2    1.0  1  PF04281.8  Mitochondrial import receptor subunit Tom22
        7.1    4.8  11.5        6.5    5.0   7.9    1.0  1  PF03344.10 Daxx Family
        8.7    3.8  16.6        8.4    3.9  11.5    1.0  1  PF04931.8  DNA polymerase phi


Domain annotation for each model (and alignments):
>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   5.0   1.1e-05    0.0078      37      74 ..      13      50 ..       3      51 .] 0.68

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.1e-05
   PF08595.6 37 serkvlsrkrkkkkkepridedenelddededdeeeed 74
                s+  vl  k+++ ++ ++ dede+e++deded++ee++
  MMETSP1325-20131115|3441_1 13 SKAGVLDVKKMRMQRADKEDEDEDEDEDEDEDEDEEDE 50
                67789999999997777777777666666655555543 PP

>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   7.8   3.7e-05     0.026     115     157 ..       8      50 ..       1      51 [] 0.60

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.7e-05
   PF05432.6 115 alqlpkkaGdigkkaakedesdedeeeeeeeeeeeeaeveene 157
                 +++   kaG  + k  + + +d ++e+e+e+e+e+e+e ee+e
  MMETSP1325-20131115|3441_1   8 TVESTSKAGVLDVKKMRMQRADKEDEDEDEDEDEDEDEDEEDE 50 
                 3456689999998888877777665555545555555555444 PP

>> PF08564.5  Cdc37 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   3.3   0.00011     0.076      50      96 ..       3      49 ..       1      51 [] 0.62

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00011
   PF08564.5 50 eeAekiverliesGllsleekiegekkkkeleeeeeeeeaekeeeee 96
                + Ae  ve    +G+l +++   ++++k++++e+e+e e e e+ee+
  MMETSP1325-20131115|3441_1  3 SLAEVTVESTSKAGVLDVKKMRMQRADKEDEDEDEDEDEDEDEDEED 49
                569999************77764444444444444444444444433 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   9.5   0.00018      0.13     111     139 ..      27      49 ..       3      51 .] 0.43

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00018
                 .......----XXXXXXXXXXXXXXXXXX CS
  PF03066.10 111 edesldeeddeedeeeeddeedddeeeee 139
                         d+e+++e+ed++ed+de+ee+
  MMETSP1325-20131115|3441_1  27 R------ADKEDEDEDEDEDEDEDEDEED 49 
                 1......2222222222222222222222 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   9.9   0.00056       0.4      16      38 ..      28      49 ..       6      51 .] 0.65

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00056
   PF09026.5 16 seeeeedeeedeededeedeeed 38
                +++e+ede+ede dede+++eed
  MMETSP1325-20131115|3441_1 28 ADKEDEDEDEDE-DEDEDEDEED 49
                455555555555.4444444443 PP

>> PF14283.1  Domain of unknown function (DUF4366)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.2   0.00059      0.42     183     212 ..      21      50 ..       7      51 .] 0.63

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00059
   PF14283.1 183 ikpkqaekeaededldeedkgdedeeeede 212
                 +k + + +++eded de +++dede+eede
  MMETSP1325-20131115|3441_1  21 KKMRMQRADKEDEDEDEDEDEDEDEDEEDE 50 
                 444444444456666666666666666665 PP

>> PF05086.7  Dictyostelium (Slime Mold) REP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   7.3   0.00056       0.4     888     910 ..      26      48 ..       7      51 .] 0.58

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00056
   PF05086.7 888 aeddkedededededEdededed 910
                 ++ dkedededededEdedede+
  MMETSP1325-20131115|3441_1  26 QRADKEDEDEDEDEDEDEDEDEE 48 
                 34445555555555555554443 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   9.3     0.001      0.75     157     195 ..      10      49 ..       2      51 .] 0.61

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.001
   PF11705.3 157 deeeklsalekkekeldaedeeeedkkee.eeeeeeeeed 195
                 + ++k+ +l  k+ ++++ d+e+ed++e+ +e+e+e+eed
  MMETSP1325-20131115|3441_1  10 ESTSKAGVLDVKKMRMQRADKEDEDEDEDeDEDEDEDEED 49 
                 4556667777777777777777777777534444444444 PP

>> PF07267.6  Nucleopolyhedrovirus capsid protein P87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   5.2    0.0014         1     389     432 ..       8      49 ..       2      51 .] 0.53

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0014
   PF07267.6 389 slpdkddeasslaptekrkRrrvrklqelssdeeedssdeeevD 432
                 +++++++    ++  +k++ +r+ k++e ++++e++++de+e+D
  MMETSP1325-20131115|3441_1   8 TVESTSK--AGVLDVKKMRMQRADKEDEDEDEDEDEDEDEDEED 49 
                 4444443..44556678888888886444444444455555555 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   8.0    0.0015       1.1      45      71 ..      26      48 ..       4      51 .] 0.41

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0015
   PF04546.8 45 seddeeeeeddddddededeeeeseea 71
                +++d+e+e++d+d+dedede+    e+
  MMETSP1325-20131115|3441_1 26 QRADKEDEDEDEDEDEDEDED----EE 48
                122222222212222222222....11 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  10.6    0.0032       2.3      53      78 ..      28      49 ..       5      51 .] 0.41

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0032
   PF10446.4 53 edededdeeddddeDeddddddddeD 78
                 d++++de++    Ded+d+d+d+eD
  MMETSP1325-20131115|3441_1 28 ADKEDEDEDE----DEDEDEDEDEED 49
                2111111111....222222222222 PP

>> PF05756.6  S-antigen protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   4.9    0.0039       2.8      43      78 ..      14      48 ..       6      51 .] 0.58

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0039
   PF05756.6 43 rsgllnekngkgqkyedleeegegenddeedsnsee 78
                ++g+l+ k+ + q+ +  e+e+e e++de++ ++ee
  MMETSP1325-20131115|3441_1 14 KAGVLDVKKMRMQRADK-EDEDEDEDEDEDEDEDEE 48
                57888888888777544.444344444444444443 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.7    0.0043       3.1     221     241 ..      28      48 ..       3      51 .] 0.43

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0043
  PF01056.13 221 ssgedseseeeeeeeeeeeee 241
                 + +ed +++e+e+e+e+e+ee
  MMETSP1325-20131115|3441_1  28 ADKEDEDEDEDEDEDEDEDEE 48 
                 222333333444444444444 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.6    0.0045       3.2     244     270 ..      21      47 ..       4      51 .] 0.43

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0045
   PF04514.7 244 keqeeeekvetesddedeegedseeee 270
                 k+ + ++  ++++d++++e+ed++e+e
  MMETSP1325-20131115|3441_1  21 KKMRMQRADKEDEDEDEDEDEDEDEDE 47 
                 222222223333333333333333333 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.9    0.0046       3.3     272     294 ..      27      49 ..       5      51 .] 0.43

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0046
   PF06524.7 272 esdddeeesaedydeeededddd 294
                 ++d ++e+++ed+de+eded++d
  MMETSP1325-20131115|3441_1  27 RADKEDEDEDEDEDEDEDEDEED 49 
                 22333333333333333333332 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   6.7    0.0067       4.8     126     150 ..      24      48 ..       4      51 .] 0.37

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0067
   PF02724.9 126 emkeeeeeesdedsdseddeeeees 150
                 +m++ ++e++ded+d+++de+e+e+
  MMETSP1325-20131115|3441_1  24 RMQRADKEDEDEDEDEDEDEDEDEE 48 
                 2222222222222222222222222 PP

>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   8.2    0.0087       6.3       3      51 ..       3      50 ..       2      51 .] 0.62

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0087
   PF04281.8  3 kltevedeeeqekeaaakekaeeesddeeedeedtdsdisddsdveedE 51
                 l ev+ e+++++ +   +k++ ++ d+e+++ed d+d+++d+d eedE
  MMETSP1325-20131115|3441_1  3 SLAEVTVESTSKAGVLDVKKMRMQRADKEDEDEDEDEDEDEDED-EEDE 50
                57788888888666666666666666666666666666665555.4555 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   7.9     0.009       6.5     443     466 ..      26      49 ..       3      51 .] 0.40

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.009
  PF03344.10 443 ekaekeedeeddekeeedkseeee 466
                 ++a+ke+++ed++++e+++++ee+
  MMETSP1325-20131115|3441_1  26 QRADKEDEDEDEDEDEDEDEDEED 49 
                 233333333332222222222222 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9  11.5     0.012       8.4     674     694 ..      29      49 ..      14      51 .] 0.51

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.012
   PF04931.8 674 eseddsEdgeedEkedddeav 694
                 + ed++Ed++edE+ed+de  
  MMETSP1325-20131115|3441_1  29 DKEDEDEDEDEDEDEDEDEED 49 
                 333333333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       798  (0.0583675); expected 273.4 (0.02)
Passed bias filter:                      549  (0.0401551); expected 273.4 (0.02)
Passed Vit filter:                       125  (0.00914277); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 260.03
//
Query:       MMETSP1325-20131115|3443_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 519.96
//
Query:       MMETSP1325-20131115|3448_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.086   12.6   0.0      0.099   12.4   0.0    1.1  1  PF13670.1 Peptidase propeptide and YPEB domain


Domain annotation for each model (and alignments):
>> PF13670.1  Peptidase propeptide and YPEB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.3e-06     0.099      10      43 ..      22      55 ..      14      61 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.3e-06
   PF13670.1 10 llaaaAlAkddtdapkadwlsreavqakleaqGy 43
                +++++   k ++++p++ wl+++a+   le++G 
  MMETSP1325-20131115|3448_1 22 IASPCGYVKLCCEHPSHGWLDVAAAFDGLEERGV 55
                4444444578**********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.73
# Mc/sec: 213.37
//
Query:       MMETSP1325-20131115|3449_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-11   42.3   0.2    3.6e-11   42.1   0.2    1.0  1  PF00067.17 Cytochrome P450


Domain annotation for each model (and alignments):
>> PF00067.17  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.2   2.6e-15   3.6e-11     355     392 ..      13      50 ..       8      56 .. 0.91

  Alignments for each domain:
  == domain 1    score: 42.1 bits;  conditional E-value: 2.6e-15
                 EEE-TT-EEEEETTTHHT-TTTSSSTTS--GGGGC-ST CS
  PF00067.17 355 ylipkGtevivnlyalhrdpevfpnPeeFdpeRFldek 392
                 +++p G +v+v+++ lhr+pe++++Pe++dp+R+++e 
  MMETSP1325-20131115|3449_1  13 VNLPRGADVFVSTWNLHRSPEYWDEPEKYDPDRWDREF 50 
                 579********************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.61
# Mc/sec: 231.78
//
Query:       MMETSP1325-20131115|3445_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.3e-21   73.8   0.0    1.5e-16   60.0   0.0    2.0  2  PF10498.4 Intra-flagellar transport protein 57
  ------ inclusion threshold ------
      0.068   11.4   2.6      0.097   10.9   1.8    1.1  1  PF10359.4 RNA pol II promoter Fmp27 protein domain


Domain annotation for each model (and alignments):
>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   8.3e-06     0.057     189     225 ..       4      43 ..       1      53 [. 0.77
   2 !   60.0   0.0   2.1e-20   1.5e-16     250     358 ..     111     221 ..      97     222 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.3e-06
   PF10498.4 189 skvdaeewklevervapqLkveikt...dakdWrkhleqm 225
                   vd+ +w+le+erv p+Lk e+ +   d   Wr+++e+ 
  MMETSP1325-20131115|3445_1   4 AAVDPVDWRLELERVGPRLKGEATKlvpDGGGWRSRVESL 43 
                 579999*************876554121668899999875 PP

  == domain 2    score: 60.0 bits;  conditional E-value: 2.1e-20
   PF10498.4 250 lskalekiekrEkqlnn..qleelvqeykeareelsevqekynqlsksvsektaelseiseeleqvkqeleergsklsdgsplvkikqaitkLkeeikqldlrigvlqhtl 358
                 ++   e+++  E+ +n+   +e+l++ +++a++  +  + +     + v+e+ta+l+e se+l+++k e+e++++ + d++p+v+i++a++ L+ee   l+lr g++ ++l
  MMETSP1325-20131115|3445_1 111 FADECERVSRGESRINSaaAFEQLCAAFRDAKADAEARERRSVAQRTVVNERTATLAETSEQLDELKDEVERKSNAAGDTDPVVNIRAALAALREETTHLELRLGIVHQQL 221
                 56778**********983369********************9999**************************************************************9986 PP

>> PF10359.4  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.8   1.4e-05     0.097     161     245 ..     152     243 ..     146     264 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.4e-05
   PF10359.4 161 ervqlelleeRlkeleeqikkleeklkelel.......nkddeelqkdleelekelselkerleflekeleelekeeeeseksssskkesse 245
                    q+++++eR ++l+e  ++l+e  +e e        ++   + +  l++l +e+++l+ rl +++++l + + +++++ +++s  +++s 
  MMETSP1325-20131115|3445_1 152 SVAQRTVVNERTATLAETSEQLDELKDEVERksnaagdTDPVVNIRAALAALREETTHLELRLGIVHQQLGRRQVTRADRARKKSARSRAST 243
                 56799***********9999999999998885556533333344557777778888888888888888777666665555554444333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       688  (0.0503218); expected 273.4 (0.02)
Passed bias filter:                      395  (0.0288912); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.74
# Mc/sec: 893.78
//
Query:       MMETSP1325-20131115|3450_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-11   41.5   0.0    6.5e-11   41.4   0.0    1.1  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   4.7e-15   6.5e-11     219     274 ..       2      59 ..       1      67 [. 0.87

  Alignments for each domain:
  == domain 1    score: 41.4 bits;  conditional E-value: 4.7e-15
  PF00248.16 219 eelselakehgvslaqlalryalsrpavgsvipgassieqleenlkal.el.elseee 274
                 +e+++la+++g+sl +++lr++ +r+a +sv++g+s+ +qleenl+++ +  +l+ + 
  MMETSP1325-20131115|3450_1   2 REYRKLAQKYGLSLTEMSLRWCKEREALTSVLLGVSNMAQLEENLAYFrNAePLPADL 59 
                 689********************************************95445666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 413.92
//
Query:       MMETSP1325-20131115|3452_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-07   29.9   0.0    4.3e-07   29.6   0.0    1.1  1  PF04784.9 Protein of unknown function, DUF547


Domain annotation for each model (and alignments):
>> PF04784.9  Protein of unknown function, DUF547
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   3.2e-11   4.3e-07      54      92 ..       1      60 [.       1      61 [] 0.97

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 3.2e-11
   PF04784.9 54 vgGeslslddIeheiLrkkkka.....................lkdprihfAlncgsisc 92
                v+G  ls+ ++eh+iLr   ++                     + +pr+ fA+ncgs+sc
  MMETSP1325-20131115|3452_1  1 VAGDVLSIAEVEHSILRAAMSSpdqalahlvlprgspyiyrlrVVEPRLNFAINCGSVSC 60
                789***************987799***********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 252.03
//
Query:       MMETSP1325-20131115|3456_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   10.9   9.7       0.34   10.0   3.5    2.2  2  PF08271.7  TFIIB zinc-binding
        1.9    8.2  14.6         43    3.9   0.9    2.2  2  PF12773.2  Double zinc ribbon
        3.7    7.4  12.9          8    6.4   4.9    2.4  2  PF09723.5  Zinc ribbon domain
        6.7    6.5  15.1        1.9    8.2   5.8    2.2  2  PF12760.2  Transposase zinc-ribbon domain
        9.9    5.6  15.1    1.3e+02    1.9  10.5    1.9  1  PF14319.1  Transposase zinc-binding domain


Domain annotation for each model (and alignments):
>> PF08271.7  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.5   0.00012      0.34       2      28 ..       7      32 ..       6      34 .. 0.79
   2 ?    3.5   0.1     0.014        38       2       6 ..      44      48 ..      43      56 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00012
                E-SSS--EEH.HB-S----BB-SSS-B- CS
   PF08271.7  2 kCPnCgstel.vfDaerGelvCtdCGlV 28
                +C +Cg++ + + D +r    C+dCG+V
  MMETSP1325-20131115|3456_1  7 HCRECGGSGIcEHDRQRSK--CKDCGYV 32
                7******993366655555..*****99 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.014
                E-SSS CS
   PF08271.7  2 kCPnC 6 
                kCP+C
  MMETSP1325-20131115|3456_1 44 KCPEC 48
                8***9 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6  10.2     0.019        52      11      49 ..       4      48 ..       1      48 [. 0.74
   2 ?    3.9   0.9     0.016        43      28      38 ..      41      51 ..      33      61 .. 0.64

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.019
   PF12773.2 11 garfCpqCgaklk.eataeevlCpsCge.....svspkarfCpnC 49
                + + C +Cg + + e+++++ +C+ Cg+           + Cp+C
  MMETSP1325-20131115|3456_1  4 KKKHCRECGGSGIcEHDRQRSKCKDCGYvpkkcVHGRRPSKCPEC 48
                6789****99999888899999****9976643334445567777 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.016
   PF12773.2 28 eevlCpsCges 38
                ++ +Cp+C + 
  MMETSP1325-20131115|3456_1 41 RPSKCPECIAV 51
                44568888664 PP

>> PF09723.5  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.2     0.012        32      26      34 ..       5      13 ..       2      16 .. 0.76
   2 ?    6.4   4.9    0.0029         8       7      34 ..      25      50 ..      23      56 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.012
   PF09723.5 26 eteCPeCgs 34
                ++ C eCg+
  MMETSP1325-20131115|3456_1  5 KKHCRECGG 13
                567888887 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0029
   PF09723.5  7 rCekCgkefevlqsisdddeteCPeCgs 34
                +C++Cg +  + ++  +  + +CPeC +
  MMETSP1325-20131115|3456_1 25 KCKDCGYVPKKCVHGRR--PSKCPECIA 50
                7*****99999999999..*******65 PP

>> PF12760.2  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   5.8    0.0007       1.9      20      45 ..       7      31 ..       3      32 .. 0.90
   2 ?    2.7   0.3     0.037     1e+02      20      25 ..      44      49 ..      34      60 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0007
   PF12760.2 20 vCphCgsreayriktrglyqCkeCrk 45
                 C  Cg++ +++  + ++ +Ck+C++
  MMETSP1325-20131115|3456_1  7 HCRECGGSGICEHDR-QRSKCKDCGY 31
                6*************8.********86 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.037
   PF12760.2 20 vCphCg 25
                +Cp C 
  MMETSP1325-20131115|3456_1 44 KCPECI 49
                599995 PP

>> PF14319.1  Transposase zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9  10.5     0.048   1.3e+02      37      78 ..      18      60 ..       4      63 .] 0.67

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.048
   PF14319.1 37 algghvvrCeeCgheklvynsCknr.hCpkCqakateewlekq 78
                ++  ++++C++Cg   + +   ++   Cp+C a ++e+ +++ 
  MMETSP1325-20131115|3456_1 18 EHDRQRSKCKDCGYVPKKCVHGRRPsKCPECIAVKQEAQAAQA 60
                556678889999987644444444349****999999888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       674  (0.0492978); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 264.86
//
Query:       MMETSP1325-20131115|3455_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   13.0   0.1      0.089   12.0   0.1    1.5  1  PF07797.9 Protein of unknown function (DUF1639)


Domain annotation for each model (and alignments):
>> PF07797.9  Protein of unknown function (DUF1639)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   6.5e-06     0.089       3      20 ..      47      64 ..      46      65 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6.5e-06
   PF07797.9  3 reEiEeDflamtGsrppr 20
                + EiE D+ amt++ + r
  MMETSP1325-20131115|3455_1 47 KAEIEADLRAMTRKQLKR 64
                57************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.82
# Mc/sec: 511.42
//
Query:       MMETSP1325-20131115|3458_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0027   17.5   4.5     0.0033   17.3   3.1    1.2  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
  ------ inclusion threshold ------
      0.015   14.9   4.9       0.02   14.5   3.4    1.2  1  PF04394.9  Protein of unknown function, DUF536
      0.021   14.3   3.2       0.03   13.9   2.2    1.3  1  PF02183.13 Homeobox associated leucine zipper
      0.069   12.9   3.2      0.065   13.0   2.2    1.1  1  PF03938.9  Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   3.1   9.5e-07    0.0033      33      71 ..       7      45 ..       3      58 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 9.5e-07
                HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCC CS
  PF02403.17 33 eldeerrelqveleelqaerNelskeIgkakkkkedaee 71
                e+d++rr+l++e+++lqa+  e s+eI+k  k +ed++ 
  MMETSP1325-20131115|3458_1  7 EADAARRRLLKESQQLQAQLMEQSEEIEKQRKVGEDRKL 45
                689******************************988764 PP

>> PF04394.9  Protein of unknown function, DUF536
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   3.4   5.7e-06      0.02      16      39 ..      13      36 ..      10      39 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 5.7e-06
   PF04394.9 16 qkLLDQQQqLaLqankkieeLenq 39
                  LL+++QqL+ q +++ ee e+q
  MMETSP1325-20131115|3458_1 13 RRLLKESQQLQAQLMEQSEEIEKQ 36
                68******************6654 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   2.2   8.8e-06      0.03      21      43 ..      12      34 ..       9      36 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 8.8e-06
  PF02183.13 21 ndsLqkEkekLraevlsLkeklq 43
                 ++L+kE ++L+a++++++e+ +
  MMETSP1325-20131115|3458_1 12 RRRLLKESQQLQAQLMEQSEEIE 34
                69****************99876 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.2   1.9e-05     0.065      29      68 ..       3      42 ..       1      60 [. 0.78

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.9e-05
   PF03938.9 29 kaspkykelqaklqeeakekqqelqakkkelqkeqknlqs 68
                 a p++ +++++l +e++++q++l ++ +e++k+ k  ++
  MMETSP1325-20131115|3458_1  3 AANPEADAARRRLLKESQQLQAQLMEQSEEIEKQRKVGED 42
                67799999999*******************9998765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1385  (0.101302); expected 273.4 (0.02)
Passed bias filter:                      877  (0.0641457); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|3459_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.4   0.1       0.17   11.7   0.1    1.3  1  PF10284.4 Luciferase helical bundle domain


Domain annotation for each model (and alignments):
>> PF10284.4  Luciferase helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   1.2e-05      0.17      29      51 ..      11      33 ..       7      41 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.2e-05
   PF10284.4 29 FkdGlhkPkFhedGlhkpmeagg 51
                  +G+hkP+ +++  h ++e g 
  MMETSP1325-20131115|3459_1 11 QSNGMHKPTLEDQRSHEKHEPGT 33
                579***************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 522.84
//
Query:       MMETSP1325-20131115|3461_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-05   25.1   0.0    1.3e-05   24.9   0.0    1.0  1  PF00629.18 MAM domain


Domain annotation for each model (and alignments):
>> PF00629.18  MAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   9.3e-10   1.3e-05     101     156 ..       4      60 ..       1      63 [. 0.90

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 9.3e-10
                 ----SEEE-----.SS-EEEEE-----TS-EEEEEEEE-.------EEE---EEE-- CS
  PF00629.18 101 eetllweisgnqg.ssWqeaevtlsaitkkfqvvfeavrgkgsegdialDdislseg 156
                   t+lw++sgn g ssW +++v++++ +    + f  v g++ +gd+alD +++ +g
  MMETSP1325-20131115|3461_1   4 APTTLWSKSGNTGtSSWSTTTVNVDTANGFSFLTFYYVGGSSYTGDVALDLVEVATG 60 
                 5789********9899**********88888899****************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 295.55
//
Query:       MMETSP1325-20131115|3453_1  [L=951]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-18   65.9   1.6    4.1e-18   65.2   1.1    1.4  1  PF00520.26 Ion transport protein
    2.4e-11   43.0   1.8    2.4e-11   43.0   1.3    2.0  2  PF07885.11 Ion channel


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   1.1     6e-22   4.1e-18       2     199 .]     214     465 ..     213     465 .. 0.90

  Alignments for each domain:
  == domain 1    score: 65.2 bits;  conditional E-value: 6e-22
                 XXXXXXXXXXXXXXXXXXXXXXXX..............XXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX...................XXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT............................-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  PF00520.26   2 leyvftiiftlemllkiialgfkl..............kftylrdpwnilDflvvlpslvslilrllnkas................gllavlrllrvlRllrllsrieglrtl.....lislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvke............................kagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatlragskigyiyfvifiilgsflllnlliavi 199
                 ++ v++++f+l+m++ +++++                 +++ylr++++ +D+l+++p   +li + +  ++                g l+++r++r+lR+l+ll++i+  r++      is+ ++  +l+++++ll +v +++a+++ +    + r + ++                             +     ++    f+ ++ a++++++++t++g+gd++++     +  ++++  ++i+lgs  + +++i+++
  MMETSP1325-20131115|3453_1 214 ANRVVDFVFILDMVFSFHTAYRTKrsegaklvkdlssiRYHYLRTWFF-IDLLSIIPW--ELIGSGVSVSDdlqeeeeddgnsfvgiGALKFVRIIRILRMLKLLRIIKASRIYaayetTISISYAYVSLIKYTILLTLVGHWMACLWIMTARLQPRGSYTWLddlaytyycdpegtaaddddvvvpysrpECPVVAKDMLRPFQMYAAAIYWSITTVTSVGYGDITPK-----NRDEMLLCTCYILLGS-GFWAYIIGNV 465
                 57899*************9996559***********************.*********..88888888766899*************8888888888888888888888777777778789999********************************9999888*************************997666777788899**************************.....8888888868888777.9999999986 PP

>> PF07885.11  Ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.4      0.72   4.9e+03      54      77 ..     331     354 ..     323     359 .. 0.81
   2 !   43.0   1.3   3.5e-15   2.4e-11      26      77 ..     418     469 ..     409     471 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.72
  PF07885.11  54 faivyillGlalfalllavlgdvl 77 
                 ++i y+ + l+  ++ll+ +g ++
  MMETSP1325-20131115|3453_1 331 ISISYAYVSLIKYTILLTLVGHWM 354
                 568888888888888888888886 PP

  == domain 2    score: 43.0 bits;  conditional E-value: 3.5e-15
  PF07885.11  26 ldalYfsfvtltTiGYGdivPg.tdagrlfaivyillGlalfalllavlgdvl 77 
                   a+Y+s++t+t +GYGdi+P+  d  +l++++yillG  ++a+++ ++  ++
  MMETSP1325-20131115|3453_1 418 AAAIYWSITTVTSVGYGDITPKnRDE-MLLCTCYILLGSGFWAYIIGNVCGIM 469
                 569*******************6666.******************99887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (951 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.37u 0.35s 00:00:01.72 Elapsed: 00:00:00.70
# Mc/sec: 3255.62
//
Query:       MMETSP1325-20131115|3464_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|3465_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.3    6.9   7.5          3    8.0   3.5    1.8  2  PF08944.6 NADPH oxidase subunit p47Phox, C terminal domain


Domain annotation for each model (and alignments):
>> PF08944.6  NADPH oxidase subunit p47Phox, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   3.5   0.00022         3      24      37 ..       7      20 ..       3      25 .. 0.87
   2 ?   -0.6   0.2       0.1   1.4e+03      14      16 ..      28      30 ..      20      51 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00022
                XXXXXXXXXXXXXH CS
   PF08944.6 24 rkkpqPavPPRPSp 37
                +++++P+vPPRP p
  MMETSP1325-20131115|3465_1  7 SSESAPIVPPRPFP 20
                5789********66 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.1
                XXX CS
   PF08944.6 14 kss 16
                ks+
  MMETSP1325-20131115|3465_1 28 KST 30
                333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 262.68
//
Query:       MMETSP1325-20131115|3466_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 409.03
//
Query:       MMETSP1325-20131115|3460_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.7   0.2       0.16   11.5   0.1    1.1  1  PF07098.6 Protein of unknown function (DUF1360)


Domain annotation for each model (and alignments):
>> PF07098.6  Protein of unknown function (DUF1360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   1.2e-05      0.16      35      84 ..       8      55 ..       2      59 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.2e-05
   PF07098.6 35 edgeaevkeevkgkgvrklvgeLlsC.ywCtgvWvaallalglvlaPrvae 84
                e++++e + +   k+++++ ge   C  wC g W+++ +  +++ +Pr+a+
  MMETSP1325-20131115|3460_1  8 EQDDQEAFAKYE-KDIQEAAGE--GClSWCNGRWATLWCGNAVCGLPRFAR 55
                444445444443.447888888..4536**************999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       460  (0.0336454); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.59
# Mc/sec: 251.82
//
Query:       MMETSP1325-20131115|3463_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-11   40.7   1.8    0.00022   20.3   0.1    2.6  2  PF13202.1  EF hand
    6.9e-10   37.4   1.5     0.0001   21.2   0.1    2.5  2  PF00036.27 EF hand
    1.6e-09   36.8  23.4      0.014   14.9   2.6    4.8  4  PF02493.15 MORN repeat
    1.9e-08   34.1   0.2    5.8e-08   32.6   0.1    1.7  1  PF13499.1  EF-hand domain pair
    9.9e-08   31.1   0.7     0.0067   16.1   0.0    2.5  2  PF13405.1  EF-hand domain
    1.7e-07   30.5   2.0     0.0012   18.3   0.1    2.7  3  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1     2e-07   0.00046       5      20 ..     117     132 ..     116     134 .. 0.95
   2 !   20.3   0.1   9.7e-08   0.00022       4      21 ..     151     168 ..     147     174 .. 0.91

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 2e-07
                 HHHH--S----B-HHH CS
   PF13202.1   5 FrafDlNgDGkIsreE 20 
                 F afD NgDG Isr+E
  MMETSP1325-20131115|3463_1 117 FMAFDSNGDGLISRDE 132
                 99*************9 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 9.7e-08
                 HHHHH--S----B-HHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreEL 21 
                 +F+++D++g+G Is++E+
  MMETSP1325-20131115|3463_1 151 LFDRVDADGSGMISIDEF 168
                 7****************9 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   4.4e-06      0.01       6      21 ..     117     132 ..     116     135 .. 0.94
   2 !   21.2   0.1   4.5e-08    0.0001       5      24 ..     151     170 ..     147     173 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4.4e-06
                 HHHHCTTTSSEBEHHH CS
  PF00036.27   6 FkefDkDgdGkIsfeE 21 
                 F  fD +gdG Is +E
  MMETSP1325-20131115|3463_1 117 FMAFDSNGDGLISRDE 132
                 899************9 PP

  == domain 2    score: 21.2 bits;  conditional E-value: 4.5e-08
                 HHHHHCTTTSSEBEHHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfke 24 
                 +F+ +D Dg+G Is +Ef++
  MMETSP1325-20131115|3463_1 151 LFDRVDADGSGMISIDEFLA 170
                 8*****************86 PP

>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   9.4e-06     0.021       8      21 ..      24      37 ..      24      39 .. 0.91
   2 !   14.9   2.6   6.2e-06     0.014       1      21 [.      40      60 ..      40      62 .. 0.85
   3 !   10.7   3.7   0.00014      0.31       1      21 [.      63      82 ..      63      84 .. 0.85
   4 !    5.3   0.1    0.0071        16       3      18 ..      91     105 ..      89     107 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 9.4e-06
                TEEE-EEEB----- CS
  PF02493.15  8 GkrhGkGvytwpdG 21
                +++hGkGv+ w +G
  MMETSP1325-20131115|3463_1 24 NLPHGKGVFEWENG 37
                68***********9 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 6.2e-06
                EE-EEETTEEE-EEEB----- CS
  PF02493.15  1 YeGeWknGkrhGkGvytwpdG 21
                Y+GeWk G+++G+G   ++ G
  MMETSP1325-20131115|3463_1 40 YDGEWKAGLPDGYGYKAYSRG 60
                9*************7666655 PP

  == domain 3    score: 10.7 bits;  conditional E-value: 0.00014
                EE-EEETTEEE-EEEB----- CS
  PF02493.15  1 YeGeWknGkrhGkGvytwpdG 21
                Y G+W++GkrhG Gv  + dG
  MMETSP1325-20131115|3463_1 63 YKGTWVGGKRHGWGVS-FYDG 82
                9***********8887.6555 PP

  == domain 4    score: 5.3 bits;  conditional E-value: 0.0071
                 -EEETTEEE-EEEB-- CS
  PF02493.15   3 GeWknGkrhGkGvytw 18 
                 G + +G  hG G++ +
  MMETSP1325-20131115|3463_1  91 GPFIDGYAHGPGTM-F 105
                 55899*******98.5 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.1   2.5e-11   5.8e-08       5      64 ..     116     170 ..     107     172 .. 0.91

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 2.5e-11
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64 
                 +F ++D++gdg ++++e  ++ +  g     +  re+++ +f+++D +g+G +s +Efl+
  MMETSP1325-20131115|3463_1 116 EFMAFDSNGDGLISRDE--AVGRLCGV---YGARREQAELLFDRVDADGSGMISIDEFLA 170
                 699*************9..88888886...6999************************97 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   2.8e-05     0.064       6      21 ..     117     132 ..     116     135 .. 0.95
   2 !   16.1   0.0   2.9e-06    0.0067       5      26 ..     151     172 ..     148     180 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.8e-05
                 -GCC-------B---H CS
   PF13405.1   6 FklfDkdgdGkidaeE 21 
                 F++fD +gdG i+++E
  MMETSP1325-20131115|3463_1 117 FMAFDSNGDGLISRDE 132
                 99************99 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 2.9e-06
                 --GCC-------B---HHHHHH CS
   PF13405.1   5 aFklfDkdgdGkidaeELrdaL 26 
                 +F+  D dg+G i+++E+++++
  MMETSP1325-20131115|3463_1 151 LFDRVDADGSGMISIDEFLAHY 172
                 7*****************9876 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.1   9.8e-05      0.22      31      46 ..     117     132 ..     116     137 .. 0.90
   2 !   18.3   0.1   5.2e-07    0.0012      25      48 ..     146     169 ..     145     171 .. 0.92
   3 ?   -1.9   0.0         1   2.3e+03       3      12 ..     205     214 ..     204     214 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 9.8e-05
   PF13833.1  31 frefDtdgdGkisfeE 46 
                 f +fD +gdG is +E
  MMETSP1325-20131115|3463_1 117 FMAFDSNGDGLISRDE 132
                 899***********99 PP

  == domain 2    score: 18.3 bits;  conditional E-value: 5.2e-07
   PF13833.1  25 eevdilfrefDtdgdGkisfeEFc 48 
                 e+++ lf+ +D+dg+G+is +EF+
  MMETSP1325-20131115|3463_1 146 EQAELLFDRVDADGSGMISIDEFL 169
                 57899******************7 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 1
   PF13833.1   3 GlItreeLkr 12 
                  +I+r++++ 
  MMETSP1325-20131115|3463_1 205 RSISRASFRQ 214
                 589*****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 903.89
//
Query:       MMETSP1325-20131115|3468_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.054   11.8   0.1      0.061   11.6   0.1    1.0  1  PF08596.5 Lethal giant larvae(Lgl) like, C-terminal


Domain annotation for each model (and alignments):
>> PF08596.5  Lethal giant larvae(Lgl) like, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   4.5e-06     0.061     341     376 ..      29      68 ..       4      72 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.5e-06
                 .......----------------------TTTS------- CS
   PF08596.5 341 e....lkeeeetdtlynpkaaipprPqvsslqWirGtqyv 376
                 +     ++ ++ +  + p+a   ++P+v++ +W+rG +++
  MMETSP1325-20131115|3468_1  29 AlpihAAAPPSAMLRCVPNASATWQPTVTASSWARGFSTT 68 
                 2555445667788889********************7765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|3470_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        89  (0.00650965); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.52
# Mc/sec: 170.51
//
Query:       MMETSP1325-20131115|3471_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.41s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 755.08
//
Query:       MMETSP1325-20131115|3473_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|3469_1  [L=941]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (941 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       675  (0.049371); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.35u 0.36s 00:00:01.71 Elapsed: 00:00:00.68
# Mc/sec: 3316.14
//
Query:       MMETSP1325-20131115|3474_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-55  184.6   2.4    5.5e-55  184.1   1.7    1.2  1  PF00705.13 Proliferating cell nuclear antigen, N-terminal domain
    2.9e-52  175.8   0.0    4.8e-52  175.1   0.0    1.3  1  PF02747.10 Proliferating cell nuclear antigen, C-terminal domain
    2.4e-06   26.7   0.0      3e-06   26.4   0.0    1.1  1  PF04139.8  Rad9
     0.0071   15.2   0.0       0.24   10.1   0.0    2.1  2  PF04005.7  Hus1-like protein


Domain annotation for each model (and alignments):
>> PF00705.13  Proliferating cell nuclear antigen, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.1   1.7   1.6e-58   5.5e-55       1     127 []       1     125 [.       1     125 [. 0.98

  Alignments for each domain:
  == domain 1    score: 184.1 bits;  conditional E-value: 1.6e-58
                 SEEEEESSHHHHHHHHHHHCTTBSEEEEEES----EEEEE-TTSSEEEEEE---TTSSEEEESS-EEE-EEHHHHHHHHTT--TSSEEEEEEETTSSEEEEEEEESSSSEEEEEEEEEE--S-EE-- CS
  PF00705.13   1 mlearleqasllkkvlealkdlvneanfdcsesGislqalDsshvaLvslelrsegfekyrCDrnlslgvnltslskilkcagnedivtlkaednadtlalvfesekkekvkesdlklklidldseh 127
                 m+earl+q+ llkk++e+++dlv++an+dc+e G+slqa+Dsshv+L +l lrs+gf++yrCDr +slg+nl+++ kilkcagned+vtlk+ed+ d l+++fes+++++++  d+++kl+d+d+e+
  MMETSP1325-20131115|3474_1   1 MFEARLVQGNLLKKIVESIRDLVSDANLDCKEAGLSLQAMDSSHVSLCALVLRSDGFDHYRCDRTISLGLNLGNMGKILKCAGNEDVVTLKSEDEGDMLTIMFESPSQDRIS--DFEMKLMDIDAEQ 125
                 9***************************************************************************************************************..9999999999885 PP

>> PF02747.10  Proliferating cell nuclear antigen, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.1   0.0   1.4e-55   4.8e-52       1     128 []     127     255 ..     127     255 .. 0.98

  Alignments for each domain:
  == domain 1    score: 175.1 bits;  conditional E-value: 1.4e-55
                 ----S--SEEEEEEHHHHHHHHHHHTTT-SEEEEEECTTEEEEEE--------EEE--B.CCTTSCCCEBEEEESS-EEEEEECHHHHHHCGGGCC-SEEEEEEETTSEEEEEE--TT--EEEEEE-BC CS
  PF02747.10   1 gipeseydavvklpsaefaricrDlsqlsdsvvisvtkegvkfsasGdiGtgnivlkqt.tdvdkeeeavkiemkepvtltfalrYlnsftkatpLservtlslssevPlvveykikdvgllkyylapk 128
                 gip++ey + ++lpsaef+ri+rDl  l+d+ +isvtkegvkfs sGd+Gtgn++l++   +v+keee v+iem+ep +ltfa+rYl +ftkatpL ++v+ls+s +vP+vvey i+  g++++ylapk
  MMETSP1325-20131115|3474_1 127 GIPDQEYACNIRLPSAEFQRIIRDLGVLGDTCTISVTKEGVKFSVSGDLGTGNVMLRNSaGSVEKEEEQVVIEMDEPCELTFAMRYLSFFTKATPLGPTVNLSMSPDVPIVVEYPIETAGHIRFYLAPK 255
                 8*******************************************************9862689****************************************************************97 PP

>> PF04139.8  Rad9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   8.9e-10     3e-06       1     208 [.      12     213 ..      12     240 .. 0.88

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 8.9e-10
   PF04139.8   1 laralqclsrigdelvleisedglelrtvnssrSayalflfkksfFqkylaekevsdqirckilvKsvlsvfrslsakektvekikisidekksrliiqllc.khgvtkthslsleeseslqavfdketcpsklrissrvLsdllehfsssleeitlelakervllksyteeekdnkkalstelsideeeFeq.yqlqedveitlslKef 208
                 l+++++++  +  + +l+ +e gl+l++++ss+ + + + ++++ F++y    + + +i + +++  + ++++++     + + ++++ +++   l i +   +++ +  ++++l + +  q+ +  ++ + ++r +s  ++ ++  ++   ++ t++++ke v+++   + + +n    ++  s+++ee +  +++ e  e+t+ ++ +
  MMETSP1325-20131115|3474_1  12 LKKIVESIRDLVSDANLDCKEAGLSLQAMDSSHVSLCALVLRSDGFDHY----RCDRTISLGLNLGNMGKILKCAG----NEDVVTLKSEDEGDMLTIMFESpSQDRISDFEMKLMDIDAEQLGIPDQEYACNIRLPSAEFQRIIRDLGVLGDTCTISVTKEGVKFSVSGDLGTGNVMLRNSAGSVEKEEEQVvIEMDEPCELTFAMRYL 213
                 568888888888999**********************************....8999999999999******9998....44557888888888888888753678999****************************************************************9997777788899987655414677779999999865 PP

>> PF04005.7  Hus1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   6.9e-05      0.24       3      98 ..       2      91 ..       1     124 [. 0.88
   2 ?    3.0   0.0      0.01        35      11      46 ..     142     177 ..     130     184 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 6.9e-05
   PF04005.7  3 FkaklrdietlkkvlqalsslakecilrLtpeklrfiiiekaaqgvqvwaqlevdllFeeyeieSaseneInlevdldqLlraLksaenansvklr 98
                F a+l + ++lkk++++++ l  ++ l  ++  l++  +  + + v++ a +  +  F++y+++     +I+l ++l+++ ++Lk a n   v+l+
  MMETSP1325-20131115|3474_1  2 FEARLVQGNLLKKIVESIRDLVSDANLDCKEAGLSLQAM--DSSHVSLCALVLRSDGFDHYRCD----RTISLGLNLGNMGKILKCAGNEDVVTLK 91
                6678888899****************************9..899999999999999*******7....689****************998877776 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.01
   PF04005.7  11 etlkkvlqalsslakecilrLtpeklrfiiiekaaq 46 
                  +++++++ l  l+ +c++ +t+e + f ++++  +
  MMETSP1325-20131115|3474_1 142 AEFQRIIRDLGVLGDTCTISVTKEGVKFSVSGDLGT 177
                 57999***********************99976544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1303.02
//
Query:       MMETSP1325-20131115|3475_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-10   39.5   0.0    2.1e-06   27.6   0.0    2.1  2  PF00575.18 S1 RNA binding domain


Domain annotation for each model (and alignments):
>> PF00575.18  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   4.1e-05      0.57      43      72 ..       5      34 ..       2      35 .. 0.89
   2 !   27.6   0.0   1.5e-10   2.1e-06       2      36 ..      55      89 ..      54      92 .] 0.92

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 4.1e-05
                EECCCCEETT----EEEEE-EEETT.EEEE CS
  PF00575.18 43 edpeevlkvgdevevkvlkvdkerkriiLs 72
                 +p ++l +g+e+ ++v  vd ++k ++L+
  MMETSP1325-20131115|3475_1  5 HHPADELEPGQELNLQVKHVDGKEKVLSLT 34
                57999*******************988886 PP

  == domain 2    score: 27.6 bits;  conditional E-value: 1.5e-10
                SSTT-EEE--EEEEETTEEEEE--.--EEEEEGGG CS
  PF00575.18  2 pekGevvkGtVtsvtkgGafVdlgngvegfipise 36
                +e+++ + ++V +vt++GafVd+g+  ++fi++ +
  MMETSP1325-20131115|3475_1 55 LEEDDELWAVVRRVTSFGAFVDVGATKDAFIHLND 89
                68999999************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 440.93
//
Query:       MMETSP1325-20131115|3476_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|3472_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-43  146.5   0.0      1e-42  145.9   0.0    1.3  1  PF00069.20 Protein kinase domain
    7.9e-15   54.5   0.0    1.3e-14   53.8   0.0    1.3  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.027   14.0   0.0       0.25   10.9   0.0    2.2  3  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.9   0.0   2.3e-46     1e-42       1     260 []       3     347 ..       3     347 .. 0.89

  Alignments for each domain:
  == domain 1    score: 145.9 bits;  conditional E-value: 2.3e-46
                 EEEEEEEE----EEEEEEEETTCCE.........EEEEEEEEGGGHHHHHHHHHHH.........HHHHHHHHH-TTB--EEEEEEE....STEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHT.CEE-S--SGGGEEEETT--E.....EE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST.......HHHHHHHHHCCCHHTTS--GGGGCSHHH......................................................HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   1 yelleklGsGsfGkVykakkkktgk.........kvAvKilkkeeekskkektavr.........ElkilkklsHpnivkllevfee....kdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsn.giiHrDLKpeNiLldkkgel.....kiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge.......seedqleliekilkkkleedepksssks......................................................eelkdlikkllekdpakRltaeeilkhpwl 260
                 y++++klG G +++V+ a+++ +++         kvA+K+ k  +e s++++ ++          E + l++   +niv++l++fe      +++++v+e + + +l  l++ eg ++      i+ ++l +le+lHs+ gi+H+D+KpeN+Ll   ++      k++DFG a++    +e+  +   treY++PE +l+a  yt++vD+Ws+G +++elltg+ +f+ +       s  +++ ++++i +   + + +  s+ +                                                      +++ +++ + l  dp++R ta+ ++++ w+
  MMETSP1325-20131115|3472_1   3 YKIERKLGWGVYSTVWLAHDNASKRagskkgmqnKVAIKVQKSAREYSRAARGEIAllqsiaaadERSALTQSGGSNIVRMLQCFEIeglhGRHTCMVFEPLGH-SLLGLIQLEGAVQPPVTAAIIAKLLDALEFLHSEcGIMHTDIKPENVLLVPGSNPespsiKLVDFGNACQ---VNEQKAKAIQTREYRSPEAILGAWPYTTSVDMWSAGALIFELLTGEILFDAStapkgsgSVSKDEVHLAEIIHHLGPIPVEVISTGRyspkwfdtagqlraatsnatvsvlgssmatprfahhdpnalvsrlarvismeeaRMVASVCLQALSLDPETRATAAVLKESAWF 347
                 7899*****************9999999999999************9999988887999**************************9899999**********77.9999*****************************55**************96666677889********86...6677777889****************************************98777777733344444444444444444444433336779***********************************************998889999999999**************9997 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.0   2.8e-18   1.3e-14       2     201 ..       4     221 ..       3     233 .. 0.82

  Alignments for each domain:
  == domain 1    score: 53.8 bits;  conditional E-value: 2.8e-18
                 EEEEEE-------EEEEEEET.....TTTSSEEEEEEEEECTTSBHHH..........HHHHHHHHHHHHHT-BTTB--BEEEBE....SSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEET.....TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE.EEHHHHHHH---HHHHHHTT CS
  PF07714.12   2 elgkklGeGafGkVvegtlkg.....ekekkevkVavKtlkesaeeee..........keefleeakimkklkhpnivkllgvct....keepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskk.lvHrdLaarNvLlee.....ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEiftl 201
                 ++++klG G +++V+ ++ +      +k+  + kVa+K+ k+  e ++          + +  +e +++++   +niv++l ++     +++++++v+e + + +Ll +++ +   +++   +  +++++ +++e+L+s+  ++H d+   NvLl       +  +k+ DfG a ++      ++k +a    ++ +pE++     +t+  D+Ws G l++E++t 
  MMETSP1325-20131115|3472_1   4 KIERKLGWGVYSTVWLAHDNAskragSKKGMQNKVAIKVQKSAREYSRaargeiallqSIAAADERSALTQSGGSNIVRMLQCFEieglHGRHTCMVFEPLGH-SLLGLIQLE--GAVQPPVTAAIIAKLLDALEFLHSECgIMHTDIKPENVLLVPgsnpeSPSIKLVDFGNACQV-----NEQKAKAIQTREYRSPEAILGAWpYTTSVDMWSAGALIFELLTG 221
                 5789*************998888999999999*******97633332222333333223344568899999999*********9988878888******9877.566677765..999********************985499***********865555578***********99.....456667777889******987766*****************994 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.15     7e+02      17      51 ..      29      67 ..      17      97 .. 0.80
   2 ?   10.9   0.0   5.5e-05      0.25     145     195 ..     119     174 ..      87     176 .. 0.78
   3 ?   -2.1   0.0      0.51   2.3e+03     111     111 ..     302     302 ..     245     359 .. 0.51

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.15
                EETT....TEEEEEESSC.CHHHHHHHHHHHHHHHCCSS CS
  PF01636.18 17 ttgag...ryvlrrarpa.raaeelrrevallrlLakag 51
                ++++g   +++ ++   a ++ + +r+e all+ +a+a+
  MMETSP1325-20131115|3472_1 29 GSKKGmqnKVAIKVQKSArEYSRAARGEIALLQSIAAAD 67
                55555556788888888889999999******9999886 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 5.5e-05
                 HHHHHHHHHHHHHHHHHC.SS--EEB-SS-SGGGEEEE....TTTTEEEE---TT- CS
  PF01636.18 145 leeleervlaalaallpg.aeppvllHgDlhpgNllvd....pddgrvgviDfeda 195
                 +  ++++++a+l+++l   +++ +++H D++p N+l+     p+ + + ++Df+ a
  MMETSP1325-20131115|3472_1 119 QPPVTAAIIAKLLDALEFlHSECGIMHTDIKPENVLLVpgsnPESPSIKLVDFGNA 174
                 44566668999999999999999**************9887766666688888877 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.51
                 T CS
  PF01636.18 111 a 111
                 +
  MMETSP1325-20131115|3472_1 302 N 302
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.82
# Mc/sec: 1113.43
//
Query:       MMETSP1325-20131115|3478_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.04   12.9   0.1      0.043   12.8   0.0    1.0  1  PF10997.3 Protein of unknown function (DUF2837)


Domain annotation for each model (and alignments):
>> PF10997.3  Protein of unknown function (DUF2837)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.1e-06     0.043     164     191 ..       1      28 [.       1      30 [. 0.94

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.1e-06
   PF10997.3 164 LsalYaglLvpeyrttastlsgliNgvA 191
                 ++a++ +++   y + ++tls+l+N v+
  MMETSP1325-20131115|3478_1   1 MAAMFLTCIHTTYALHCTTLSSLVNDVS 28 
                 79***********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 170.51
//
Query:       MMETSP1325-20131115|3479_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.1e-07   28.3  12.3    1.5e-05   24.4   8.5    2.2  1  PF13920.1 Zinc finger, C3HC4 type (RING finger)
    7.3e-05   22.1   5.8     0.0018   17.6   2.1    2.4  2  PF14447.1 Prokaryotic RING finger family 4
     0.0038   16.9   9.5      0.012   15.2   6.5    1.8  2  PF13923.1 Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   8.5   3.4e-09   1.5e-05       3      49 ..      18      82 ..      16      83 .. 0.89

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 3.4e-09
   PF13920.1  3 ktCvvClereadvlllpCgHlclCeeCaerllk..................rkkkCpiCrspies 49
                + C +C++ +++ +l+pCgH c+C  C ++                         Cp+C+++i++
  MMETSP1325-20131115|3479_1 18 QFCLLCHKAPSTHVLFPCGHKCICDGCRKSNGVvdsatwqkalanpegggeLWSFCPLCNEEIKR 82
                67*************************99985578999999999999998888899999999987 PP

>> PF14447.1  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   2.1   3.9e-07    0.0018       5      33 ..      15      44 ..      11      46 .. 0.91
   2 !    4.9   0.0    0.0038        17      38      51 ..      69      82 ..      66      86 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 3.9e-07
   PF14447.1  5 qpeqpcllcgtvgtkrvllpCgH.lvpdet 33
                + +q cllc + ++++vl pCgH  ++d++
  MMETSP1325-20131115|3479_1 15 DGDQFCLLCHKAPSTHVLFPCGHkCICDGC 44
                56899******************77***99 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0038
   PF14447.1 38 rYsgCPfCgtrlet 51
                 +s CP+C++ + +
  MMETSP1325-20131115|3479_1 69 LWSFCPLCNEEIKR 82
                5788*****98765 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   6.5   2.6e-06     0.012       4      45 ..      19      77 ..      16      78 .. 0.69
   2 ?    2.6   0.1     0.023   1.1e+02       5      13 ..      73      81 ..      69      87 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 2.6e-06
   PF13923.1  4 sCpiCleelenpviltpCgHl.yCkkCieq..wleks...kkk.............CPiCr 45
                 C +C + ++   +l+pCgH  +C  C ++  +++++   k               CP+C+
  MMETSP1325-20131115|3479_1 19 FCLLCHKAPSTH-VLFPCGHKcICDGCRKSngVVDSAtwqK-AlanpegggelwsfCPLCN 77
                6***********.57*****659*99966522233325441.1455557777888899998 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.023
   PF13923.1  5 CpiCleele 13
                Cp+C+ee +
  MMETSP1325-20131115|3479_1 73 CPLCNEEIK 81
                888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       504  (0.0368637); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|3481_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|3482_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.31s 00:00:00.71 Elapsed: 00:00:00.72
# Mc/sec: 449.32
//
Query:       MMETSP1325-20131115|3486_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|3487_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        8.1    4.0  13.1        7.9    4.0   9.1    1.0  1  PF05642.6 Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   9.1   0.00058       7.9     145     227 ..      14      91 ..       2     139 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.00058
   PF05642.6 145 gvssssgsttsqtdlstkl.sqtglgasGshaqqdpavsvsgvvgvpGlgvpGvGvpGvggvg...vlpgvgvprvgvapgvGvggl 227
                   +++ gstt+  + ++++ s   +g s   +q  p+ s s  +g+  l vpG   p + g g    + g g            gg 
  MMETSP1325-20131115|3487_1  14 RARTADGSTTVASSSTATMpSVPMVGGSAGSSQATPGASASAGLGSEALPVPGPPGPSSAGGGaggSTVGNGQ---------KSGGA 91 
                 44678888888777666651556677554445999*9999999999999999876665332220002223222.........22211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 682.04
//
Query:       MMETSP1325-20131115|3488_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 423.64
//
Query:       MMETSP1325-20131115|3485_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1013  (0.074093); expected 273.4 (0.02)
Passed bias filter:                      577  (0.042203); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.44s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|3491_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 277.47
//
Query:       MMETSP1325-20131115|3492_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|3480_1  [L=821]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0014   18.9   0.0     0.0079   16.5   0.0    2.1  2  PF06742.6 Protein of unknown function (DUF1214)


Domain annotation for each model (and alignments):
>> PF06742.6  Protein of unknown function (DUF1214)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   5.8e-07    0.0079      25      99 ..      64     161 ..      46     167 .. 0.79
   2 ?   -1.4   0.0      0.21   2.8e+03      37      96 ..     326     392 ..     303     396 .. 0.62

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 5.8e-07
   PF06742.6  25 ytltfeapelppaafWsltvydadtglvan.plnryslns..................naDGsftiylspedpea.pNwl....apptggfylvlRlyg 99 
                   + ++++elp+a+++s+++yd  + l+++ ++n+ s+++                   + G ++i + p+ +e+ pN +      + g+f l++Rly+
  MMETSP1325-20131115|3480_1  64 DAFKISSDELPYARYFSFQTYDLLA-LLPTgAINDMSIKTeqgtgpnaydnetaaegtIQQGAYEIFVTPDGNEGyPNEIrglmGRDEGDFLLFMRLYD 161
                 5678999**************8774.5555268888877778888888888999999999**********99999888886544444458********8 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.21
   PF06742.6  37 a.afWsltvydadt.g.lvanplnryslns.......naDGsftiylspedpeap.NwlapptggfylvlR 96 
                 + +++sl++ +    g + ++ ++++ ++        + D +f ++++p +++ p   +    +++ ++lR
  MMETSP1325-20131115|3480_1 326 ElRYFSLSTVNRSPpGrVAQTIQDKEIIEHykslhpyDWDRRFVVWIGPMNSTVPmMAV----EEHAMILR 392
                 35788888887777664444433333333355566788999999999996666653222....24555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (821 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.12u 0.38s 00:00:01.50 Elapsed: 00:00:00.79
# Mc/sec: 2490.39
//
Query:       MMETSP1325-20131115|3490_1  [L=379]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   9.3e-106  353.4  21.6   1.4e-105  352.8  15.0    1.2  1  PF00262.13 Calreticulin family
  ------ inclusion threshold ------
      0.028   14.7   0.5      0.095   12.9   0.0    2.1  2  PF13882.1  C-terminal domain of Fibronectin type III
       0.19   10.5   7.8      0.031   13.1   1.1    2.2  2  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
        9.4    4.4  12.0         11    4.2   7.3    1.8  2  PF03344.10 Daxx Family


Domain annotation for each model (and alignments):
>> PF00262.13  Calreticulin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  352.8  15.0    4e-109  1.4e-105     119     367 .]       1     249 [.       1     249 [. 0.99

  Alignments for each domain:
  == domain 1    score: 352.8 bits;  conditional E-value: 4e-109
  PF00262.13 119 mFGpdkcgsenkvhfilrkknpktkekeekhlkkkpisrkddklthlYtLiikpdntfeiriDgesvkegslledfepplnppkeIkdpedkKPedWddrekipDpeakkpedwdekepetipdpeavkpedwdedepeyIpDpeakkPedwdeeedgeweapliknpkcek.kgcgkwkppliknpkYkgkwkppeikNPnYkgkWkprkipnpdytedkeplveepigaigfelwsvksdilfdnili 367
                 mFGpd cg +nkvhfilr++np+++e eekh++++p   k+d  +hlYtL++k dn++ei++D +++ +gslled++pp+np+k I+dp+d+KP+dW+d++ki+Dp+a+kp+dwde++p++ipd +a+ p+dw++dep+ +pDp+ak P+dwdeeedg+weapl++npkc+k +gcg+w++pli+np+Ykgkw++p+i+NP+Ykg+Wk r+i+np+y+ d++p+++  iga+ +e+w+++ +i +dn+l+
  MMETSP1325-20131115|3490_1   1 MFGPDACGDTNKVHFILRHQNPISGEWEEKHATDTPT-PKKDAKSHLYTLVVKTDNSYEIYVDLDVKSKGSLLEDMSPPVNPSKVIDDPTDSKPTDWVDEKKIKDPDATKPDDWDEDAPKKIPDADATIPSDWLQDEPDNVPDPSAKMPSDWDEEEDGDWEAPLVPNPKCKKvSGCGEWTRPLIDNPDYKGKWSAPMIDNPDYKGEWKARQIENPNYFVDEKPHNMARIGALAVEIWTTNGGIRMDNFLV 249
                 9************************************.6677**************************************************************************************************************************************************************************************************************97 PP

>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1         2     7e+03      65      72 ..     277     284 ..     263     296 .. 0.43
   2 ?   12.9   0.0   2.8e-05     0.095      14      70 ..     319     377 ..     316     379 .] 0.58

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 2
   PF13882.1  65 edekelkr 72 
                 + +ke+ r
  MMETSP1325-20131115|3490_1 277 NAKKEKAR 284
                 11111111 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 2.8e-05
   PF13882.1  14 aiallllillivc.likrsrggkysvkekedakldpeeqpkkd.eefeeysreedekel 70 
                 ai l++l++ +v  +  +s+g k  v +  +++ d++e++ +  ++  ++++ee+e+e+
  MMETSP1325-20131115|3490_1 319 AITLVVLLFTAVFvFSPSSKGKKPAVPDVAEEEKDEDEDKSEGnDGAAAQEEEEEEEEE 377
                 78888888777763777888999899998887666666543332333333333333332 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.4     0.067   2.3e+02      43      86 ..      86     128 ..      65     134 .. 0.64
   2 ?   13.1   1.1   9.1e-06     0.031       8      67 ..     320     378 ..     316     379 .] 0.68

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.067
  PF03896.11  43 ddvvdedeedeaeveedekteaeeeedeeeagevkaspdadtti 86 
                 dd +d+  +d + ++  +  +a + +d + +++ k+ pdad ti
  MMETSP1325-20131115|3490_1  86 DDPTDSKPTDWVDEKKIKDPDATKPDDWD-EDAPKKIPDADATI 128
                 44444444443333333333444444444.4579999****998 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 9.1e-06
  PF03896.11   8 llllllalpavlllvgavkklaasaqdltedeeaeddvvdedeedeaeveedekteaeee 67 
                 + l++l + av+++  ++k+++ +  d++e+e+ ++d+ +++ +d a  +e+e++e ee+
  MMETSP1325-20131115|3490_1 320 ITLVVLLFTAVFVFSPSSKGKKPAVPDVAEEEK-DEDEDKSEGNDGAAAQEEEEEEEEEK 378
                 6799999***99977777777766666666555.67777788888877777744443333 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.24   8.2e+02     612     635 ..     271     294 ..     245     322 .. 0.63
   2 ?    4.2   7.3    0.0031        11     431     475 ..     334     378 ..     327     379 .] 0.64

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.24
  PF03344.10 612 stpqeeqeeeerkRkrkeevesek 635
                 +++++++ ++e+ Rk +e  ++e 
  MMETSP1325-20131115|3490_1 271 EAQSDKNAKKEKARKAREAKRAEG 294
                 445555666666666665554443 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0031
  PF03344.10 431 sPllasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeee 475
                 sP+ +++     + ae+e+de++d++e +d + ++eeeeeeeee+
  MMETSP1325-20131115|3490_1 334 SPSSKGKKPAVPDVAEEEKDEDEDKSEGNDGAAAQEEEEEEEEEK 378
                 566666666667778888888888888777555555544444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       755  (0.0552224); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.78u 0.35s 00:00:01.12 Elapsed: 00:00:00.53
# Mc/sec: 1713.62
//
Query:       MMETSP1325-20131115|3494_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-16   58.7   0.0    3.6e-16   58.5   0.0    1.0  1  PF02617.12 ATP-dependent Clp protease adaptor protein ClpS
     0.0061   16.8   0.0     0.0065   16.7   0.0    1.0  1  PF00416.17 Ribosomal protein S13/S18
     0.0086   15.6   0.1      0.011   15.3   0.1    1.2  1  PF11608.3  Limkain b1
  ------ inclusion threshold ------
      0.019   14.5   0.3      0.025   14.2   0.2    1.3  1  PF05002.10 SGS domain


Domain annotation for each model (and alignments):
>> PF02617.12  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0     1e-19   3.6e-16       8      70 ..      10      72 ..       4      76 .. 0.94

  Alignments for each domain:
  == domain 1    score: 58.5 bits;  conditional E-value: 1e-19
  PF02617.12  8 kViLlNDdvhtmefVievLqkvfgmteeqAeqimlevhreGravvgvgtleeaetkveqvqrk 70
                ++ L+ND++++   V +vL+kvf+m +++A+++m+++h++Gra +g+++ eeae+ +e + ++
  MMETSP1325-20131115|3494_1 10 EIFLYNDPMNKKARVEQVLKKVFSMGKDDANRVMMSAHKTGRASCGTFDNEEAERLHEMMVQE 72
                689****************************************************99998775 PP

>> PF00416.17  Ribosomal protein S13/S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   1.9e-06    0.0065       4      67 ..      15      78 ..      12      82 .] 0.89

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 1.9e-06
                TT------TTTTTTTS------HHHHHHHHHTT--TTSB-----HHHHHHHSSGGGT---STTH CS
  PF00416.17  4 ntnvdgkkkieialteikGigrkkanqilkkldvdkekrvgelteeelekieeivenylvendl 67
                n  +++k ++e+ l++++ +g+  an ++ ++    ++  g  ++ee e+++e++ + +v +++
  MMETSP1325-20131115|3494_1 15 NDPMNKKARVEQVLKKVFSMGKDDANRVMMSAHKTGRASCGTFDNEEAERLHEMMVQEDVLGEV 78
                556788999*********************************************9997776665 PP

>> PF11608.3  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   3.3e-06     0.011       2      71 ..       8      81 ..       7      82 .] 0.67

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 3.3e-06
   PF11608.3  2 esllfvsnLPvnkd..kkaiknRLrrLsdncGGkvlsvsgks..avlrfanqeaaeRalkRleneDvfGnritv 71
                +s +f +n P+nk+   + + +++  + ++   +v+  + k+  a+    ++e aeR +  + +eDv+G+ + v
  MMETSP1325-20131115|3494_1  8 TSEIFLYNDPMNKKarVEQVLKKVFSMGKDDANRVMMSAHKTgrASCGTFDNEEAERLHEMMVQEDVLGEVVRV 81
                5778999****99843333444444444566678876554432255555566789**************97765 PP

>> PF05002.10  SGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.2   7.2e-06     0.025      19      51 ..      17      49 ..       6      67 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 7.2e-06
                XXXX----HHHHHHHHT----CHHHHHHHHHHC CS
  PF05002.10 19 eeeeseelnklfkklYknadedtkrammKsfve 51
                  ++++ +++++kk+++ + +d  r mm +  +
  MMETSP1325-20131115|3494_1 17 PMNKKARVEQVLKKVFSMGKDDANRVMMSAHKT 49
                4567778*********************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       629  (0.0460064); expected 273.4 (0.02)
Passed bias filter:                      560  (0.0409596); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|3495_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.5    8.0   8.8       0.52    7.9   6.1    1.1  1  PF05642.6 Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   6.1   3.8e-05      0.52     202     252 ..      12      58 ..       3     102 .. 0.70

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 3.8e-05
   PF05642.6 202 vggvgvlpgvgvprvgvapgvGvgglggvpgvgvlesnssseGeedddeee 252
                 + g+g+  gvgv+ v  a g+G+g   g  gvg+  s++  e eed de++
  MMETSP1325-20131115|3495_1  12 GAGAGAGAGVGVGVVRRAAGAGMG--SGAGGVGMVPSST--EVEEDGDEKK 58 
                 357888888888888888888888..7888999965555..5555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 522.41
//
Query:       MMETSP1325-20131115|3498_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.6    7.1   5.4        9.5    5.3   0.2    2.1  2  PF00335.15 Tetraspanin family


Domain annotation for each model (and alignments):
>> PF00335.15  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.6    0.0012        17      48      78 ..       6      37 ..       1      38 [. 0.83
   2 ?    5.3   0.2   0.00069       9.5      29      72 ..      97     141 ..      52     146 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0012
  PF00335.15 48 liiviGviililgilGc.igalkeskcllliy 78
                 ++++G +i+ ++il c + a+++ + +++ y
  MMETSP1325-20131115|3498_1  6 SMLYLGPSIFMFAILACgAVAWCNYRRFIAWY 37
                567899***********888999988887766 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.00069
  PF00335.15  29 vsldlla.easnssksavilliiviGviililgilGcigalkesk 72 
                 v+  +l+   +n   ++  l+i+ ++ i++++ ilG ++++k s+
  MMETSP1325-20131115|3498_1  97 VQWLPLNcAYENGFSAWDALVIVTVSPIAVFVVILGLAWTWKLSR 141
                 55556665566667778888999899999999********98665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 769.89
//
Query:       MMETSP1325-20131115|3499_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-10   40.3  14.4    1.7e-10   40.1  10.0    1.0  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.037   14.1   5.1      0.055   13.5   0.0    2.2  2  PF05425.8  Copper resistance protein D
        0.3    9.0   6.1       0.38    8.6   4.3    1.0  1  PF05977.8  Transmembrane secretion effector
        6.3    6.7   7.4        4.5    7.2   0.2    2.4  2  PF07178.6  TraL protein


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1  10.0   4.9e-14   1.7e-10      40     179 ..       3     142 ..       1     160 [. 0.88

  Alignments for each domain:
  == domain 1    score: 40.1 bits;  conditional E-value: 4.9e-14
  PF07690.11  40 lyslgyaiasllaGrlsdrfGrrrvlllglllfalglllllfasslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslgWravFlilailsllaav.lvllllpreppe 179
                 + +l ++  ++++G l++rfG+ +v ++g ++fa++++++l+  ++ + + ++ +l Gl+  +lf+++ +l++  + +++  r+ g+  +++   a +g   +g++++++gW+ +  ++++l ++ ++ l +++ +r+ ++
  MMETSP1325-20131115|3499_1   3 AHFLMMFSPTFVTGQLMNRFGPFKVSVAGGVVFAAAMAIMLW-GQVLWNFTAGMMLVGLAWNLLFSSATVLLTSCYEPQDAIRVQGVNDVFIFGLAGCGSFSSGFIYAAYGWTFLVKVAGVLVIIQLItLYIFWSYRRVKK 142
                 5677777778999***********************888889.566659****************************************************************************9887655555555444 PP

>> PF05425.8  Copper resistance protein D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   2.2      0.16   5.6e+02      17      45 ..      31      58 ..      16      79 .. 0.43
   2 ?   13.5   0.0   1.6e-05     0.055      28      71 ..      97     142 ..      82     164 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.16
   PF05425.8 17 vllvtGlvnalvllgl.agllttaygqlll 45
                  +v ++++a++l  + + l++ + g++l+
  MMETSP1325-20131115|3499_1 31 GGVVFAAAMAIML--WgQVLWNFTAGMMLV 58
                3333333333444..223333333333322 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 1.6e-05
   PF05425.8  28 vllg.l.agllttaygqlllaklalvvvmlalaainrfrllprlea 71 
                 +  g + +g+  +ayg+ +l+k+a v+v++ l  ++ f+ ++r+++
  MMETSP1325-20131115|3499_1  97 AGCGsFsSGFIYAAYGWTFLVKVAGVLVIIQLITLYIFWSYRRVKK 142
                 3333655788889*****************9999999999999955 PP

>> PF05977.8  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   4.3   0.00011      0.38     275     392 ..      16     133 ..       9     144 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00011
   PF05977.8 275 srlrrrlsserlvllaavalAlvllslalssslwvavlvlllgGaaWiaalstlnvavqlavprWvrgRalsvYltvlaGglaaGsllWGtvaealslelaLllaavalllgalllll 392
                  +l +r++  ++ +++ v++A++++++   + lw  +  ++l G aW + +s+  v    +       R+  v  + ++G    Gs+  G +  a++ ++ + +a+v++++ +++l+ 
  MMETSP1325-20131115|3499_1  16 GQLMNRFGPFKVSVAGGVVFAAAMAIMLWGQVLWNFTAGMMLVGLAWNLLFSSATVLLTSCYEPQDAIRVQGVNDVFIFGLAGCGSFSSGFIYAAYGWTFLVKVAGVLVIIQLITLYI 133
                 56788888888999999************************************999999998888889*************************************9999998887665 PP

>> PF07178.6  TraL protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   1.3     0.044   1.5e+02      23      52 ..      35      64 ..      24      71 .. 0.81
   2 ?    7.2   0.2    0.0013       4.5      31      60 ..     112     144 ..     105     146 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.044
   PF07178.6 23 lipalllfvlgilsnkiliglilallvlla 52
                ++ a++++++g ++ +++ g++l  l++  
  MMETSP1325-20131115|3499_1 35 FAAAMAIMLWGQVLWNFTAGMMLVGLAWNL 64
                677888899999999999998888777754 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0013
   PF07178.6  31 vlgilsnk...iliglilallvllalrklKkgk 60 
                 ++ +l++     +i  +++l +++ +r++Kkgk
  MMETSP1325-20131115|3499_1 112 GWTFLVKVagvLVIIQLITLYIFWSYRRVKKGK 144
                 455544442227788889999**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       730  (0.0533938); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1017.23
//
Query:       MMETSP1325-20131115|3493_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-47  158.4   0.0    1.1e-46  158.0   0.0    1.2  1  PF00071.17 Ras family
    2.9e-19   69.6   0.0    3.8e-19   69.2   0.0    1.1  1  PF08477.8  Miro-like protein
      3e-06   26.4   0.0    1.2e-05   24.5   0.0    1.8  2  PF00025.16 ADP-ribosylation factor family
      0.004   16.2   0.0     0.0052   15.8   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.048   13.5   0.0       0.06   13.2   0.0    1.2  1  PF01926.18 50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.0   0.0     4e-50   1.1e-46       1     153 [.       2     206 .]       2     206 .] 0.99

  Alignments for each domain:
  == domain 1    score: 158.0 bits;  conditional E-value: 4e-50
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHH.HHHHHHHHHSTTTSSEEEE---TTGGG.....................................................G-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvk.kwveeikrvaeenvpivLvGnKvDlee.....................................................kravsteegeelakelglkfletSAktnenveeaf 153
                 K+v+vGd+avGKt+ll++++ ++ +++y +Ti +d y+ ++ +d+k v+l++wDTAGqe++++lr+l+y  +++++l+++  + +s++nvk kw+ e++r+a++ +p++L+G+K+D ++                                                     +  vs+e g+++a+elgl +le+SA t+++++e+f
  MMETSP1325-20131115|3493_1   2 KVVVVGDGAVGKTCLLVSYTANQMPSDYMPTI-FDTYSVNTCIDNKLVSLSLWDTAGQEDYDKLRPLSYPLTDCFILCFSTLNPKSLDNVKtKWLPELRRHAPK-TPVILCGTKTDARKgresyvasiamnhpeccshapaspsliarpdasvmpnppdvdpemlqrlravnEVPVSAEIGQQVADELGLSYLECSALTQQGLKEVF 206
                 9*******************************.**********************************************************9***********6.*****************************************************************99999******************************98 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   1.4e-22   3.8e-19       1     119 []       2     115 ..       2     115 .. 0.93

  Alignments for each domain:
  == domain 1    score: 69.2 bits;  conditional E-value: 1.4e-22
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 kvvvvGd  vGK+ ll++++  ++p  + +++++ dt++v+t  +d++  +l+lwd++g+e+ +k  +l    +d ++l ++  +++sl++v+    wl+elr+ + k pvil+g+k+D
  MMETSP1325-20131115|3493_1   2 KVVVVGDGAVGKTCLLVSYTANQMP--SDYMPTIFDTYSVNT-CIDNKLVSLSLWDTAGQEDYDKLRPLSYPLTDCFILCFSTLNPKSLDNVKTK--WLPELRRHAPKTPVILCGTKTD 115
                 8************************..99**********854.567777779*************87777**********************766..********************98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   4.4e-09   1.2e-05      15     129 ..       1     118 [.       1     137 [. 0.80
   2 ?   -0.3   0.0      0.18   4.8e+02     149     167 ..     187     205 ..     165     206 .] 0.74

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 4.4e-09
                 EEEEEE--TT---HHHHHHHHHS-EEE.E-S--S-E..EEE.EEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT CS
  PF00025.16  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfn..vee.leiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpe 129
                 ++++++G  + GKt +l  ++ +++ +  +PTi  +  v++ +  k +++++wD  Gqe   +l    ++ td  i +  + + + l++ k++    l+++   + ++++ + K D+++
  MMETSP1325-20131115|3493_1   1 MKVVVVGDGAVGKTCLLVSYTANQMPSdYMPTIFDTysVNTcIDNKLVSLSLWDTAGQEDYDKLRPLSYPLTDCFILCFSTLNPKSLDNVKTKWLPELRRH-APKTPVILCGTKTDARK 118
                 799****9999**********99996559***9544113332556999***********999999999************999999999998755544443.34567777788888766 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.18
                 SSEEEEEEBTTTTB--HHH CS
  PF00025.16 149 rkleiqkcsavkgeglkeg 167
                   l+  +csa++++glke 
  MMETSP1325-20131115|3493_1 187 LGLSYLECSALTQQGLKEV 205
                 5566678*********986 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.9e-06    0.0052       1      63 [.       2      63 ..       2      79 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.9e-06
   PF04670.7  1 klLLmGksgsGKtSmrsiiFsnylardtl.rLgaTidveqshvrflgnlklnlwDcgGqeefve 63
                k++++G +  GKt++     +n ++ d + ++  T +v+  ++  ++ ++l+lwD+ Gqe++ +
  MMETSP1325-20131115|3493_1  2 KVVVVGDGAVGKTCLLVSYTANQMPSDYMpTIFDTYSVN--TCIDNKLVSLSLWDTAGQEDYDK 63
                899***********9888888888888542666677654..45558999***********9976 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.2e-05      0.06       1      55 [.       2      58 ..       2     127 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.2e-05
                EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSE.SEEEEETTE...EEEEE---S CS
  PF01926.18  1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrdi.tenevkkek...iilvDtPGi 55
                +v++vG   vGK+ L+ + t   ++  sdy  t  d+   n+ +++k   + l+Dt+G 
  MMETSP1325-20131115|3493_1  2 KVVVVGDGAVGKTCLLVSYTA--NQMPSDYMPTIFDTySVNTCIDNKlvsLSLWDTAGQ 58
                699*****************5..45788888888888566777666555457******3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 987.30
//
Query:       MMETSP1325-20131115|3500_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.003   15.9   1.1     0.0032   15.8   0.7    1.0  1  PF01490.13 Transmembrane amino acid transporter protein


Domain annotation for each model (and alignments):
>> PF01490.13  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.7   2.3e-07    0.0032     287     375 ..       3      88 ..       1      99 [. 0.79

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.3e-07
  PF01490.13 287 sfplqlhplrevvenvlirkeavagasekkapkskllrlvirlllvvityliAlsvpslakvlslvGatsstslsfilPalfhlklikt 375
                 s pl+++  r+vv   l+      ++ +  ap s+ ++ ++ ++++++++++A+ ++  + v+s+ Ga++++ l+f  P  + l+++k+
  MMETSP1325-20131115|3500_1   3 SHPLLFTSFRDVVLSTLKAS--GLPSMPTFAP-SSGSWRALSVAMLAMFTIVAIVTTDVGFVVSINGALFGSGLIFCVPTAIFLAAMKN 88 
                 67888888888888888654..4444444444.455555677888889999****************************9999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 534.19
//
Query:       MMETSP1325-20131115|3502_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.2   1.1        5.8    6.7   0.1    2.4  2  PF01599.14 Ribosomal protein S27a


Domain annotation for each model (and alignments):
>> PF01599.14  Ribosomal protein S27a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1   0.00042       5.8      17      28 ..      12      23 ..       4      26 .. 0.85
   2 ?    6.5   0.1   0.00046       6.3      19      34 ..      34      49 ..      28      61 .. 0.92

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00042
  PF01599.14 17 lrreCpnerCGa 28
                 +reC + +CG+
  MMETSP1325-20131115|3502_1 12 RKRECEKSSCGH 23
                589********7 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.00046
  PF01599.14 19 reCpnerCGaGvFmAe 34
                +eC +e+C a +F A+
  MMETSP1325-20131115|3502_1 34 NECISEECYADIFAAN 49
                69***********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 370.35
//
Query:       MMETSP1325-20131115|3503_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 402.25
//
Query:       MMETSP1325-20131115|3504_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-41  142.6   0.3    1.5e-41  142.3   0.2    1.0  1  PF00150.13 Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> PF00150.13  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.3   0.2   1.1e-45   1.5e-41       4     281 .]      19     340 ..      16     340 .. 0.83

  Alignments for each domain:
  == domain 1    score: 142.3 bits;  conditional E-value: 1.1e-45
                 TCEEE.....BGGGGCST.......-SSGCSHHHHHHHHHHH--SEEEEEEE........HGGGG-STTTT.....C--HHHHHHHHHHHHHHHTTT-EEEEEEEES..SSSG.-S-CCCTHHHHHHHHHHHHHHHHHHCTT-TTBEEEESSSS--TSS-TTBT-CCTTTBHHHHHHHHHHHHHCT-TTSEEEEE-HH.................HHC-HCHHHCCSG...CSSTTTEEEEEE---CCHHHTCCG-CCHHHHCCHHHHHHHHHHHTTT...TTSEEEEEEE--B-TT-HCHHHHHHHH....HHHHHTC.T-EEEESESSSS- CS
  PF00150.13   4 sgkpv.....nlkglsts.......wgnpyttkalidevkdagfntvRlpvs........wgelvennpdy.....kvdenslerveevvkyakenglyvildiHse..egwltkadgnssedtaeeffkklwtqiAerykkndevvifelmNEPhgnntgaewtseeadevkayaeeaikaIRavgpnrliivegns.................wsgnldgavlndP...ndsqdnliysvHfYgpsdfaqtefgkdltdktnlaqrledaakylve...kgipviigEfGgsnadgdlakeeaekw....ldylkek.giswiyWslnpks 281
                 +g+p      n+ g++t        w++p     ++d + d+ fn++R+p+         + ++++++pd      +  ++sle+++ +v+ + ++g+ ++ld+H    +g   +  ++ss++++++ ++  w+++Aery++  +v +++++NEP+g     +w + + +++ a+a  +++a+ ++   +li+veg+s                 ++ nl g v+++P   + ++++l+ys+H+Ygps+ a +ef  +  +++n+++ +e++++y+++   ++++v++gE+Gg  ++++ + + +  w    +dyl ++   s ++W+ln++s
  MMETSP1325-20131115|3504_1  19 NGTPLqikglNWHGFQTTtgllhgiWSQP--FSFFFDFLVDNQFNALRVPMDldlmlndrTPGYITPEPDEgypspLASNTSLEILDWFVAQCADRGILIMLDMHCLdtSGTNASPVFYSSKFSRQDAISG-WKAMAERYANAWNVFAIDVFNEPFG----GTWAEGQDTDMDAFAVDVAAAVHESTD-WLIMVEGTSnspnctevidgdtvvcgYGDNLLG-VAEHPvqlG-KANKLVYSPHTYGPSQHARDEF-TNADFPNNMPDVWENHWGYIRKiegNDAAVVLGEWGGPVTGESDDVDNNGLWmsaiVDYLVANdMQSNFFWCLNSDS 340
                 66677333335556655599999999995..699******************5544433324444333333458888888*************************986644444555899999********.*************************....358777999*************99986.*******99****************99999999.99***7743.58********************.889***************9964444999********9866665566666667888899998885678999***9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.53
# Mc/sec: 1727.19
//
Query:       MMETSP1325-20131115|3505_1  [L=298]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-50  169.1   0.7    4.3e-50  168.1   0.5    1.5  1  PF02803.13 Thiolase, C-terminal domain
    2.9e-49  167.3   6.6    4.8e-49  166.6   4.6    1.4  1  PF00108.18 Thiolase, N-terminal domain
     0.0029   17.4   0.5     0.0084   15.9   0.1    2.0  2  PF08541.5  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
  ------ inclusion threshold ------
        0.2   11.5   1.2       0.41   10.5   0.0    2.1  3  PF07311.7  Dodecin
       0.57    9.2   4.2       0.76    8.8   2.9    1.1  1  PF11593.3  Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF02803.13  Thiolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.1   0.5   1.6e-53   4.3e-50       2     123 .]     176     297 ..     175     297 .. 0.98

  Alignments for each domain:
  == domain 1    score: 168.1 bits;  conditional E-value: 1.6e-53
                 --SEEEEEEE-----GGG-----HHHHHHHHHH----CCC-S-BEE--SBHHHHHHHHHHTT-GGCCBS-----------------HHHHHHHHHHHHT..----EE---------EEEEE- CS
  PF02803.13   2 kplakirsfatvgvdpeilglgPayaikkalkkaGltvedidlfEinEAFaaqalavakeldldlekvNvnGGaialGHPlGasGaRilvtllselkkeggklglaalCigggqgvalviek 123
                 ++l+ +rs+++vgv+pei+g+gPa ai++a++kaGl ++did+fEinEAFa+qa++++++l++d  kvN +GGaialGHPlG++GaR+++tll+el++ g+++g++++Cig+g+g+a+v+e+
  MMETSP1325-20131115|3505_1 176 PVLGALRSYSVVGVPPEIMGIGPAKAIPAAVEKAGLGLDDIDIFEINEAFASQAVYCVEKLGIDVAKVNPKGGAIALGHPLGCTGARQIATLLHELNRTGQRFGVISMCIGTGMGAAAVLER 297
                 57899******************************************************************************************************************986 PP

>> PF00108.18  Thiolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.6   4.6   1.7e-52   4.8e-49      93     264 .]       2     168 ..       1     168 [. 0.90

  Alignments for each domain:
  == domain 1    score: 166.6 bits;  conditional E-value: 1.7e-52
                 HHHHHHHHHHH----SEEEE-----CCCH-CCE.....-----CEEEEEHCHH.CCCCCTCGSB---HHHHHHHHTT--HHHHHHHHHHHHHHHHHHHH---HTTTEE-EEE....-----...EEE-S-TTS-TT--HHHHCCS-BSSS------B---B-------EEEEEEEHH CS
  PF00108.18  93 kavalaaqkiaageadivvagGvEsmsnapylleasraglklgkaklvdsllkdgladakneihmGitaenvakkfkisReeqDefAlrSqqkakkAqkeGkfkdeivPvkvkt..rkgke...kvvdkDegirkettlekLaklkpaFkkeeGtvtAgnaSqlnDGaaavllmses 264
                 +a a +a ++a+g +++++agG+Esm+++ +  +    +++l+        +k   a+  + ++mGit+enva+k++++R +qD+fA++S++ka++Aq++G f++eivPv+v++  ++gk     vv +D+g+r+ tt+ekLaklkp+Fkk  G++tAgn+Sq++DGaaavl+m++s
  MMETSP1325-20131115|3505_1   2 QAFAHVASAVASGVIEVGIAGGMESMTSTDMGST--VPSVDLDV-------IKAHPAARDCMLPMGITSENVAAKYGVTRATQDQFAAASHAKAAHAQSQGLFDAEIVPVTVTVpgEDGKAattAVVAADDGVRPTTTAEKLAKLKPVFKKG-GSTTAGNSSQVSDGAAAVLVMRKS 168
                 789999**********************999883..33344433.......4445577889**************************************************9988888887777899***********************98.*********************985 PP

>> PF08541.5  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.9   5.2e+03      35      51 ..      57      74 ..      43      92 .. 0.62
   2 !   15.9   0.1   3.1e-06    0.0084       2      81 ..     207     291 ..     206     297 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.9
                TTEE--GG.GT----TTH CS
   PF08541.5 35 eekvvvnl.deyGntsaa 51
                +  +  n+ ++yG t a 
  MMETSP1325-20131115|3505_1 57 MGITSENVaAKYGVTRAT 74
                444445555677777654 PP

  == domain 2    score: 15.9 bits;  conditional E-value: 3.1e-06
                 HC--------SEEEE--S-HHHHHHHHHH----TTEE.....--GG.GT----TTHHHHHHHHHHHC---------EEEE------ CS
   PF08541.5   2 ekagltpedidwfvphqanlriidavakrlglpeekv.....vvnl.deyGntsaasiplaLdeaveegklkpgdlvllvgfGaGl 81 
                 ekagl ++did f ++ a ++    ++++lg++ +kv     ++ l + +G t+a  i  +L+e+ ++g+ + g   + +g+G+G 
  MMETSP1325-20131115|3505_1 207 EKAGLGLDDIDIFEINEAFASQAVYCVEKLGIDVAKVnpkggAIALgHPLGCTGARQIATLLHELNRTGQ-RFGVISMCIGTGMGA 291
                 89*******************************99874444456677999*****************883.445555555555553 PP

>> PF07311.7  Dodecin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.5   6.7e+03      18      29 ..      64      75 ..      60      76 .. 0.77
   2 ?   -2.9   0.1       2.3   6.4e+03      18      32 ..     112     126 ..     111     132 .. 0.77
   3 ?   10.5   0.0   0.00015      0.41      18      41 ..     200     223 ..     195     227 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.5
                HHHHHHHHHHHH CS
   PF07311.7 18 dAiknAverAsk 29
                 A+k +v+rA +
  MMETSP1325-20131115|3505_1 64 VAAKYGVTRATQ 75
                599999999976 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 2.3
                 HHHHHHHHHHHHH-S CS
   PF07311.7  18 dAiknAverAsktlr 32 
                 +A+ +Av  A + +r
  MMETSP1325-20131115|3505_1 112 KAATTAVVAADDGVR 126
                 589999999988776 PP

  == domain 3    score: 10.5 bits;  conditional E-value: 0.00015
                 HHHHHHHHHHHHH-S-EEEEEEEE CS
   PF07311.7  18 dAiknAverAsktlrnlrwfeVke 41 
                 +Ai  Ave+A   l+++++fe++e
  MMETSP1325-20131115|3505_1 200 KAIPAAVEKAGLGLDDIDIFEINE 223
                 79********************98 PP

>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.9   0.00028      0.76     133     219 ..      70     161 ..      53     208 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00028
   PF11593.3 133 kksaksnaattsstanTpaaasvkkansasaPnatagv....Gsaattaaisattattptttakkprkprqtkk..aaaaakkqasaqaqaqa 219
                 +++a ++  +++s a+  +a s +  ++   P +  +v    G aatta + a     pttta k  k +   k   ++ a ++++++  a+a
  MMETSP1325-20131115|3505_1  70 VTRATQDQFAAASHAKAAHAQSQGLFDAEIVPVT-VTVpgedGKAATTAVVAADDGVRPTTTAEKLAKLKPVFKkgGSTTAGNSSQVSDGAAA 161
                 2233333333334444444444444444444765.777899****************999999998887765543544444444455444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1457.38
//
Query:       MMETSP1325-20131115|3506_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-32  110.4   0.0    8.7e-32  110.1   0.0    1.0  1  PF00069.20 Protein kinase domain
    5.2e-25   87.9   0.0    8.3e-25   87.2   0.0    1.3  1  PF07714.12 Protein tyrosine kinase
    8.7e-05   22.2   0.1    0.00018   21.2   0.1    1.4  1  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.1   0.0   1.9e-35   8.7e-32      74     256 ..       4     203 ..       1     205 [. 0.92

  Alignments for each domain:
  == domain 1    score: 110.1 bits;  conditional E-value: 1.9e-35
                 EEEEE--SC-EHHHHHH....HHCCB-HHHHHHHHHHHHHHHHHHHHT.....CEE-S--SGGGEEEETT--EEE------EEE...............CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20  74 ylvleyveggdlfdllk....kegklseeeikkialqilegleylHsn.....giiHrDLKpeNiLldkkgelkiaDFGlakkl...............eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilk 256
                 ++v+e++ g +l+d lk    ++  +s+ ++ +++l + +++++lH++       iHrDLKp+Ni ++++g lk+ DFGla ++                 ++ +lt ++g+ +YmAPEv l ++ y ++vD++s++++ ye+l ++ pf+g + e+++e++++  +++    +     +++el+ l + ++++d ++R+ +  +++
  MMETSP1325-20131115|3506_1   4 FIVVEILAG-SLADRLKlkdkDKDAISYAQAMELLLALSQAINHLHNEcdpaaITIHRDLKPDNIGFTHDGILKLFDFGLAAVIpraipvdeirqnggrRLPRFRLTGQTGSVRYMAPEVAL-NQPYNERVDTYSFAMVAYEVLGKRKPFHGMTVETHREVVCRGGQRPQLDRS-----RPQELNLLFEACWAQDIDTRPDFSAVVQ 203
                 689999966.9999999999899999*********************999997779**************************99**********99988888889*****************.**************************************9999885544332.....3489******************998887 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.0   1.8e-28   8.3e-25      77     258 ..       4     204 ..       1     205 [. 0.83

  Alignments for each domain:
  == domain 1    score: 87.2 bits;  conditional E-value: 1.8e-28
                 EEEEE---B--HHHHHHHT..GTTGSBHHHHHHHHHHHHHHHHHHHHTT.....EEEST-SGGGEEEETTTEEEE-----CEES...TTTSCEEESTT-EEC..........GGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHHHH CS
  PF07714.12  77 livteyvkgGdLlefLrkk..ekekltlkdllkfalqiakGmeyLeskk.....lvHrdLaarNvLleeekvvkisDfGLardi...ekddyykkkeeaklp..........vkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekpekcpeelyelmkqCweeepeeRptfkelvek 258
                 +iv+e +  G+L + L+ k  +k+++++++ +++ l +++++++L+++       +HrdL   N+  +++ + k+ DfGLa  i      d+ +++++++lp          v++mapE+  ++ ++++ D +sf ++ +E++   ++p++g++ e+  e + + g+r +  ++ p+el+ l + Cw+++ + Rp+f+++v++
  MMETSP1325-20131115|3506_1   4 FIVVEIL-AGSLADRLKLKdkDKDAISYAQAMELLLALSQAINHLHNECdpaaiTIHRDLKPDNIGFTHDGILKLFDFGLAAVIpraIPVDEIRQNGGRRLPrfrltgqtgsVRYMAPEVALNQPYNERVDTYSFAMVAYEVLG-KRKPFHGMTVETHREVVcRGGQRPQLDRSRPQELNLLFEACWAQDIDTRPDFSAVVQR 204
                 5677766.47888876544338999*********************986666669**************************99987733444444444444322222333339*****************************99.66*************997778888889999************************9986 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   3.9e-08   0.00018     136     201 ..      25      89 ..       9      90 .. 0.68

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 3.9e-08
                 HHHHCTHH...HHHHHHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEETTTTEE.EE---TT-BBE-TC CS
  PF01636.18 136 lvaselle...lleeleervlaalaallpgaeppvllHgDlhpgNllvdpddgrv.gviDfedaglgppl 201
                 ++a ++ +   ll++l + ++++l+ + +   ++  +H+Dl+p+N+ ++  ++ +  ++Df++a + p++
  MMETSP1325-20131115|3506_1  25 KDAISYAQameLLLALSQ-AINHLHNECD--PAAITIHRDLKPDNIGFT--HDGIlKLFDFGLAAVIPRA 89 
                 333344444433334444.6666666666..79999*************..666668********99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.69
# Mc/sec: 909.92
//
Query:       MMETSP1325-20131115|3508_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|3509_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.066   12.1   0.0      0.096   11.6   0.0    1.4  1  PF08381.6 Transcription factor regulating root and shoot growth via Pin3


Domain annotation for each model (and alignments):
>> PF08381.6  Transcription factor regulating root and shoot growth via Pin3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     7e-06     0.096      12      31 ..      30      49 ..      18      58 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7e-06
   PF08381.6 12 pGVyitlvtlpdGtkeLKrv 31
                + V i+l  lpdG+++ Krv
  MMETSP1325-20131115|3509_1 30 NRVHIYLKLLPDGQRIPKRV 49
                4599***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.28s 00:00:00.61 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|3507_1  [L=378]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.6    8.3  13.8       0.65    9.5   7.1    2.2  2  PF13436.1  Glycine-zipper containing OmpA-like membrane domain
        2.5    8.4  10.4        7.8    6.8   2.6    2.6  2  PF00428.14 60s Acidic ribosomal protein
        4.7    7.0   8.1          9    6.1   5.6    1.4  1  PF03032.10 Brevenin/esculentin/gaegurin/rugosin family


Domain annotation for each model (and alignments):
>> PF13436.1  Glycine-zipper containing OmpA-like membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.56   2.5e+03      20      51 ..      33      63 ..      15      71 .. 0.56
   2 ?    9.5   7.1   0.00014      0.65      37      98 ..     148     208 ..     145     218 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.56
   PF13436.1 20 gksfeqfqaddaeCrqyAesqtgakaqeaaes 51
                  s ++ ++   +C  +Ae++  + a+   +s
  MMETSP1325-20131115|3507_1 33 SPSSDSIRSATPACVGVAEEKLSD-ANGFVQS 63
                455566677777777777776554.3444444 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00014
   PF13436.1  37 AesqtgakaqeaaesaaegaavGaavGAaagaaaggagagaaiGAaaGllvGaaaGagagqa 98 
                 A+s+ g+ +++ a +++++ ++G  +G +ag++a   g+g   G ++G ++G  +G++ag  
  MMETSP1325-20131115|3507_1 148 AASRRGSRSDSTADDSMTSSMIGSGAGSVAGSVAVL-GTGSVAGLGTGSVAGLDTGSVAGLD 208
                 777788888899999999999999999999998887.8888888888888888888887754 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   2.6    0.0017       7.8      68      82 ..      72      87 ..      42      97 .. 0.60
   2 ?    5.0   0.3    0.0062        28      45      66 ..     350     371 ..     327     375 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0017
  PF00428.14 68 eekkeeeee.Eeeddd 82
                eek+e eee Eee++ 
  MMETSP1325-20131115|3507_1 72 EEKAEDEEEdEEEEEG 87
                2222222221344443 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0062
  PF00428.14  45 klaaaaaaaaaaaaaaaaaaaa 66 
                  +++a+a + aaaa+++++aa 
  MMETSP1325-20131115|3507_1 350 VMVPAPAQPSAAAAEVQGEAAS 371
                 3447777777777777777764 PP

>> PF03032.10  Brevenin/esculentin/gaegurin/rugosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.6     0.002         9      23      43 ..      72      92 ..      68      94 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.002
  PF03032.10 23 eekredeeeneeeeekeeqse 43
                eek edeee+eeeee++++ +
  MMETSP1325-20131115|3507_1 72 EEKAEDEEEDEEEEEGMRSVQ 92
                9******99998998887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.39s 00:00:01.14 Elapsed: 00:00:00.74
# Mc/sec: 1224.09
//
Query:       MMETSP1325-20131115|3511_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|3515_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.64    8.5  34.0       0.77    8.2  23.6    1.0  1  PF09731.4 Mitochondrial inner membrane protein
        1.7    8.1  12.6        2.5    7.5   8.7    1.4  1  PF12767.2 Transcriptional regulator of RNA polII, SAGA, subunit


Domain annotation for each model (and alignments):
>> PF09731.4  Mitochondrial inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  23.6   0.00011      0.77      51     209 ..      11     188 ..       3     198 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00011
   PF09731.4  51 eeeeep.........tvskpqisvvssvtkeskepkeekkkeki..pkkssaseevaeveakatseaaeakqpksiqeleealeelleealketekataqakeakeeakeavdeatdklkeaseseekarekae.............eeeaakelkdaaeenpaklleklkeveekvkkaesl 209
                 +++ ++         +++ + + ++s  +     p++e++k+ki  +++ +a++++a +++ ++++a++a+++k+++e+++al++++ee+ k++++a+++  + + +ak++ ++ ++k +ea  ++e + + ++             +++  + +  +a+++ +k+l++    e+  +k +s+
  MMETSP1325-20131115|3515_1  11 LKQAKEsprkdmedpNLDTKEPGYMSPRK-----PESEAEKRKIeqEERARAEQRAAAARQAEEDAAKAAAEKKAEEEKVAALKHKAEEEAKKKQRAEEEQLKNQAKAKQKQEADAKKQQEADARAELDAAIERaimttykkpyklaDIQEFNAKELKAYQRKHKTLKRTIDKEKLTTKGYSQ 188
                 44443344454444445555555555544.....44455555552234466666667777777777777779999999999999999999999999998888888777777777777776666555555555558988888888888666666666777777777766655555555555554 PP

>> PF12767.2  Transcriptional regulator of RNA polII, SAGA, subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   8.7   0.00037       2.5      69     192 ..       9     148 ..       7     178 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00037
   PF12767.2  69 sILknalakspppaaaskagkswgkandkpssnngakpvsprksrsskrlkrkvmslrpkergrlkki.............................etkeagkkqsasekasllekrlkekpeiasvedgeeveqilk..lewsrsisssyaap 192
                 +ILk a ++sp  + +           d ++  ++   +sprk +s    krk+  + ++ r++ +++                             +++ea+kkq+a+e +   +++ k+k+e+ + +++e   ++ +    ++r i++ y+ p
  MMETSP1325-20131115|3515_1   9 AILKQA-KESPRKDME-----------DPNLDTKEPGYMSPRKPESEA-EKRKIE-QEERARAEQRAAaarqaeedaakaaaekkaeeekvaalkhkAEEEAKKKQRAEEEQLKNQAKAKQKQEADAKKQQEADARA-EldAAIERAIMTTYKKP 148
                 677777.444443333...........233444444455555555433.444444.333333333333445566665556666666666666666655555555555444444444444444444444433333333.12245555566665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3338  (0.244149); expected 273.4 (0.02)
Passed bias filter:                      872  (0.06378); expected 273.4 (0.02)
Passed Vit filter:                       252  (0.0184318); expected 13.7 (0.001)
Passed Fwd filter:                        80  (0.00585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.81u 0.44s 00:00:02.25 Elapsed: 00:00:00.87
# Mc/sec: 556.40
//
Query:       MMETSP1325-20131115|3514_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       728  (0.0532475); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.39s 00:00:01.03 Elapsed: 00:00:00.55
# Mc/sec: 1280.96
//
Query:       MMETSP1325-20131115|3516_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|3513_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0031   17.0   0.0     0.0048   16.4   0.0    1.4  1  PF03567.9  Sulfotransferase family
  ------ inclusion threshold ------
      0.088   11.9   0.1       0.13   11.3   0.1    1.2  1  PF01674.13 Lipase (class 2)


Domain annotation for each model (and alignments):
>> PF03567.9  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   7.1e-07    0.0048       7      95 ..      25     135 ..      20     250 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 7.1e-07
   PF03567.9   7 pddkivfcrvpKvasttfkrvlvrligk.kctcnrrsinetwlfsrrstgwscglfadltelssteipkrld.k........................yfkfifvRdPfeRllSa 95 
                 ++  i+ +++   a+tt+      +  + k+ c +++ ++t ++      w++g++ + t+ls+ ++    d +                         +++ + RdP++RllS 
  MMETSP1325-20131115|3513_1  25 GEALILNLHITHHAGTTICSWAGANGPTpKFACMQPRPPQTAAHVPVLSEWHHGTLMNGTMLSNIRV----DfHfvsielasgklhyplapfpfehpnVVSMCVMRDPISRLLSG 135
                 55668889999999999999999999999*********************************55554....43345689***********************************6 PP

>> PF01674.13  Lipase (class 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1     2e-05      0.13       7      60 ..     153     205 ..     150     213 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2e-05
  PF01674.13   7 vhgnsklaaekwskliekfkekgyteaelyattygdtnesksleraemkceyvk 60 
                 +h+     ++ w+++++ + +++y+ + l +t ++d+++ +  e +e  c+ + 
  MMETSP1325-20131115|3513_1 153 IHDHETWKSKMWWTYADSYFTNNYAMNSLLSTAPEDKQHRNTHEGLE-RCKALL 205
                 78888888999****************************99999999.999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1298.03
//
Query:       MMETSP1325-20131115|3517_1  [L=615]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-63  214.7   0.2    1.8e-63  213.9   0.1    1.3  1  PF01031.15 Dynamin central region
    2.5e-16   59.2   4.4    2.5e-16   59.2   3.0    2.2  2  PF02212.13 Dynamin GTPase effector domain
    2.9e-11   43.3   0.0    9.1e-11   41.7   0.0    1.9  1  PF00350.18 Dynamin family


Domain annotation for each model (and alignments):
>> PF01031.15  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.9   0.1   3.9e-67   1.8e-63      11     283 ..      85     362 ..      73     379 .. 0.94

  Alignments for each domain:
  == domain 1    score: 213.9 bits;  conditional E-value: 3.9e-67
                 XXXXXXXXXXXXXHHHHCSSXXCCCHHHHHHHHHHTXTTGGGCGGGXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHH------....------HHHHHHHHHHHHHHHHHHHHH---....HHHHHHHHHHH-----------TTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH..HHTTSHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHT.S----------- CS
  PF01031.15  11 pLklGYvgVvnRsQkdinekkslkealekEreFFenhpsyrtlaercgtpyLakkLnkeLvehIrksLPdlkeqinkklqetekeLekyGesvpedeeeklalllelitkFsedfkslieGeedk.el.stkelsggariryiFnelfekllkkldple....klsdeeirtairnsrGrelplFvpekaFellvkkqikrLeepalkcvelvyeelekivkkvlsk..elkrfpnLkeeikevvedllreqleeteklvenlidmelayintnhpdflka 283
                 +LklGY+gVvnRsQkdi +++s+++a+ekE+++F+++p+yr+l  r+gt++L+++ +++Lv+ I++ LP++ +++n+++ ++++eL+++ ++ p   ++  +++ e+i++F ++f+ li+G ++   l +t+el ggari+ +F ++f++ +  l+++e    +l +++ir +++n +G    lF+ + a + ++ kqi+r+++p++kc + vy+e+ k+ ++ +++   l  fp+ + +i evv+++l  q ++t +++++ ++m+   in  hpdf + 
  MMETSP1325-20131115|3517_1  85 KLKLGYIGVVNRSQKDIIDHRSITDAREKEAQYFASEPAYRSLFARMGTQHLVTRCSEQLVQAIQRELPTISKKLNQLIYQKNQELKALPDTQP---ATLRSMMTEVIHAFIDAFNGLIDGLKKAsGLeDTSELVGGARIEALFSSVFRTEIFDLQVFEatdgSLAEDNIRILMKNTKGLGGGLFMDNAALDKMIAKQIERFRDPSIKCARMVYDEMSKLQNSAVDEvaVLGAFPKARLAIIEVVSRVLSGQHDKTVEHLNTFVEMNCHRINYDHPDFDSV 362
                 7****************************************************************************************99999...9999********************999753359*********************99999866222257899*******************************************************9999999************************************************765 PP

>> PF02212.13  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.56   2.5e+03      36      56 ..     144     167 ..     106     192 .. 0.68
   2 !   59.2   3.0   5.5e-20   2.5e-16       2      91 ..     485     573 ..     484     574 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.56
  PF02212.13  36 lvnetkeel...qnellrkLykee 56 
                 lv+ +++el    ++l + +y+++
  MMETSP1325-20131115|3517_1 144 LVQAIQRELptiSKKLNQLIYQKN 167
                 444444443111455555555555 PP

  == domain 2    score: 59.2 bits;  conditional E-value: 5.5e-20
  PF02212.13   2 eaieieeiklllksYfdivrkniedqvPkaImhflvnetkeelqnellrkLykeelleelLqEddevaekRkelkerlevLkqAlrilde 91 
                 e++++e++  l ++Yf+ ++k++ dqvPk+I+++lv++t++++ +e++  L +  ++eel++ +d+v+ +R+e++  le L++A+++l e
  MMETSP1325-20131115|3517_1 485 EQTQVEQVVALTDAYFSLAKKSVVDQVPKYIQLLLVEHTQKKVAKEVMM-LVSDANVEELMSPSDDVKIRREETQAALEKLQEAHSMLFE 573
                 899*******************************************886.5666669****************************99866 PP

>> PF00350.18  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0     2e-14   9.1e-11     114     168 .]       8      63 ..       3      63 .. 0.91

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 2e-14
                 ------HHHHHHH.STTEEEEEEEETTS-STT-SHHHHHHHH------EE-EEE-C CS
  PF00350.18 114 vnkrdqelveeyi.kkadiilavtdanhdlstsealflarevdpkgkrtivVltkl 168
                 ++++  +++ +yi ++++i+lav++an+dl+ s+a  l+++vdpkg+rti+Vltkl
  MMETSP1325-20131115|3517_1   8 TPQKIHQMILRYIaQPNCIVLAVSAANNDLAVSDAIALSQQVDPKGERTIGVLTKL 63 
                 4555559***********************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       765  (0.0559538); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.05u 0.39s 00:00:01.44 Elapsed: 00:00:00.63
# Mc/sec: 2339.30
//
Query:       MMETSP1325-20131115|3520_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       722  (0.0528087); expected 273.4 (0.02)
Passed bias filter:                      563  (0.0411791); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.77
# Mc/sec: 276.98
//
Query:       MMETSP1325-20131115|3522_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|3518_1  [L=1148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-46  155.6   0.0      6e-32  110.1   0.0    2.9  3  PF00899.16 ThiF family
    2.9e-27   93.9   0.6    4.8e-23   80.4   0.5    2.8  2  PF02134.16 Repeat in ubiquitin-activating (UBA) protein
    4.3e-17   61.1   0.0    9.1e-17   60.0   0.0    1.6  1  PF10585.4  Ubiquitin-activating enzyme active site
    3.5e-06   27.0   0.1    0.00023   21.2   0.0    2.5  2  PF09358.5  Ubiquitin-activating enzyme e1 C-terminal domain
  ------ inclusion threshold ------
      0.063   12.3   0.0       0.16   10.9   0.0    1.7  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF00899.16  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   2.1e-14   5.7e-11       3      97 ..      24     114 ..      22     147 .. 0.87
   2 ?   -2.9   0.0       1.8     5e+03      61      88 ..     356     383 ..     351     387 .. 0.81
   3 !  110.1   0.0   2.2e-35     6e-32       3     132 ..     462     600 ..     460     603 .. 0.92

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 2.1e-14
  PF00899.16   3 skvlvvGaGglGseaaeaLaraGvgkltlvDkDtvelsNlnRqllfreedvgkpKaevakerlreinpeveveaveeriteenleellkdvDlvv 97 
                 +kvl+vG+ g+G+e+a++++  G + +t++D   v +++l   ++ +e+d+gk++ ev   +l+e+ +e++v+ v+e ++e  ++  +    +v+
  MMETSP1325-20131115|3518_1  24 MKVLIVGMTGIGTEVAKNIILQGSRAVTFYDPTPVAMKDLGVNFCLSESDIGKRRDEVTVPKLQELSKECKVSMVNELTDEVVADHTV----VVI 114
                 79*************************************************************************9999665555544....333 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.8
  PF00899.16  61 akerlreinpeveveaveeriteenlee 88 
                 a + ++e+ p+ +v a++++++e+ + +
  MMETSP1325-20131115|3518_1 356 AMQVFNETTPNAKVAAIDNDVDEDVIRK 383
                 6678889999999999999998887765 PP

  == domain 3    score: 110.1 bits;  conditional E-value: 2.2e-35
  PF00899.16   3 skvlvvGaGglGseaaeaLaraGv.....gkltlvDkDtvelsNlnRqllfreedvgkpKaevakerlreinpeveveaveeri...teenleell.kdvDlvvdalDniearlllndacvkkgkplisagvlgfkgqv 132
                  k ++vG+G+lG+e+++++a+ G+     g+lt+ D D+velsNl Rq+lfre++v kpK  +a +++ e+np+ + ea+e+++   te+ +++ +  ++D v +alDn+ear++++++cvk+++pl+++g+ g+ g+v
  MMETSP1325-20131115|3518_1 462 LKYFMVGCGALGCEFLKNFAMNGFcvgpqGHLTVTDADRVELSNLARQFLFREDTVSKPKSVSACAKVTEMNPAFKPEALEMFVgekTEDHFNDDFwTNLDGVCNALDNMEARFYVDKMCVKYSLPLLESGTMGTGGNV 600
                 67899*******************************************************************************5554444444445678********************************9998876 PP

>> PF02134.16  Repeat in ubiquitin-activating (UBA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0    0.0001      0.28       2      34 ..     758     790 ..     757     817 .. 0.87
   2 !   80.4   0.5   1.7e-26   4.8e-23       2      66 ..     864     930 ..     863     931 .. 0.97

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.0001
  PF02134.16   2 fdkddddhvdfvaaaanlRaenfgikeksrnev 34 
                 +d+d+++h  f++a++nl   + g++++ +++v
  MMETSP1325-20131115|3518_1 758 YDPDNETHWMFMVATTNLIGAMLGVHPAKVQDV 790
                 79**********************999877766 PP

  == domain 2    score: 80.4 bits;  conditional E-value: 1.7e-26
  PF02134.16   2 fdkddddh..vdfvaaaanlRaenfgikeksrnevkqiagnIIPaiattnAivaaivvlelikvleg 66 
                 f+kddd +  +df+aaa+n+Ra n++i+  ++++ k +ag+IIPaiatt+A+v+++v+lel+kv+++
  MMETSP1325-20131115|3518_1 864 FEKDDDFNfhIDFIAAASNMRADNYSIPNTDFSKAKLVAGRIIPAIATTTAAVTGLVMLELFKVVQD 930
                 9*****9999******************9***********************************986 PP

>> PF10585.4  Ubiquitin-activating enzyme active site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.0   3.3e-20   9.1e-17       2      44 ..     607     650 ..     606     651 .. 0.95

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 3.3e-20
   PF10585.4   2 vTecYecspdpeeks.iPvCTlrsfPseieHCIeWArdlFeklF 44 
                 +T+ Y++  d+ e   iP+CTlr+fP+ i+HCIeWArd+Fe +F
  MMETSP1325-20131115|3518_1 607 KTKTYRDGGDAVEGGgIPMCTLRNFPHLIDHCIEWARDQFEAIF 650
                 799***********77**************************99 PP

>> PF09358.5  Ubiquitin-activating enzyme e1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   8.3e-08   0.00023      17      61 ..     980    1031 ..     973    1038 .. 0.84
   2 ?    3.1   0.0     0.032        89      76     125 .]    1095    1144 ..    1072    1144 .. 0.88

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 8.3e-08
   PF09358.5   17 ePieapkkki.kdkef......tlWdrievegdltlkelidyfeekyglevs 61  
                  e ++++k+ + k+++       ++Wd++ + +d+t++el+d f+++++l+ s
  MMETSP1325-20131115|3518_1  980 EAGNVKKEYYiKEVKAaypeghSVWDKLMIPNDMTVQELVDFFKSEHNLTLS 1031
                  5666667766766666889999**************************9865 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.032
   PF09358.5   76 kekkkerlekkiselveevskkklpeekkyldlevscededgedvevPsi 125 
                  ++  k  l++k++el+ +++  +++  k  l+  +  ++edg dve Ps+
  MMETSP1325-20131115|3518_1 1095 PQPVKSTLDMKLTELLADKGGVDISGRKLLLVDGMQLTNEDGLDVEYPSV 1144
                  6778999******************99999999999999*********87 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   5.9e-05      0.16      28      81 ..      15      66 ..       3      95 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 5.9e-05
                CG-B-.GGGSEEE-B-------HHHHHHHH---.EEEE--SS--...HHHH---E CS
  PF02826.14 28 allgkelsgktvGiiGlGrIGqavakrlkafgm.kvlaydrskkkeeeeeelgae 81
                + + ++l +++v i+G+  IG++vak +   g   v++yd+++ +   +++lg++
  MMETSP1325-20131115|3518_1 15 EETVRKLVRMKVLIVGMTGIGTEVAKNIILQGSrAVTFYDPTPVA---MKDLGVN 66
                566778999*****************988666658999**99773...4555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.60u 0.43s 00:00:02.03 Elapsed: 00:00:00.87
# Mc/sec: 3162.09
//
Query:       MMETSP1325-20131115|3526_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 657.82
//
Query:       MMETSP1325-20131115|3525_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-43  146.2   2.3    6.8e-43  146.0   1.6    1.0  1  PF00227.21 Proteasome subunit
  ------ inclusion threshold ------
      0.037   14.0   0.0      0.093   12.7   0.0    1.6  2  PF07037.6  Putative transcription regulator (DUF1323)
       0.15   12.0   2.1        3.6    7.6   0.1    2.8  3  PF12587.3  Protein of unknown function (DUF3761)


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.0   1.6   1.5e-46   6.8e-43       2     190 .]      25     206 ..      24     206 .. 0.96

  Alignments for each domain:
  == domain 1    score: 146.0 bits;  conditional E-value: 1.5e-46
                 HC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE.-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEEE CS
  PF00227.21   2 kkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiG.sgseaaktlleklykedltleeavelavkalkealerdklsgknvevavi 190
                 ++Gtt+++  +++gvv++ad+r+++g +++++ + +K+  ++d i+m+ +G+aaD++++ +++r+ +  ++ + gr ++v+      aa l++ ++++++ +++++++++g+d  +g+++y +   G++++    +aiG sgs+++++ ++++yke ++ +ea  +++k++ +a+ rd +sg+ +++++i
  MMETSP1325-20131115|3525_1  25 ATGTTIMACCFDGGVVMGADSRVSTGTYIANRVS-DKVAALHDSIFMCRSGSAADTQAISDYVRYYLAAHSTEVGRAPTVK-----TAATLARRIAYENKDNLLAGIIVGGWDAVQGGSVYVVPLGGTMMQM--PFAIGgSGSTYIYGHVDAQYKEGMSRQEAQNFVKKSIAHAMARDGSSGGIIRLVTI 206
                 58***************************88886.**********************************************.....*********************************************9..466666*******************************************9998876 PP

>> PF07037.6  Putative transcription regulator (DUF1323)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.4   6.4e+03      15      24 ..      80      89 ..      72     121 .. 0.60
   2 ?   12.7   0.0     2e-05     0.093      10      48 ..     172     210 ..     168     220 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.4
   PF07037.6 15 qtinrWvRke 24
                q+i+ +vR +
  MMETSP1325-20131115|3525_1 80 QAISDYVRYY 89
                4444444433 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 2e-05
   PF07037.6  10 lGyarqtinrWvRkegWkteplpGvkGGkarlihideqv 48 
                  G++rq  + +v+k   +  +++G  GG  rl+ id++ 
  MMETSP1325-20131115|3525_1 172 EGMSRQEAQNFVKKSIAHAMARDGSSGGIIRLVTIDANG 210
                 59*********************************9874 PP

>> PF12587.3  Protein of unknown function (DUF3761)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1    0.0008       3.6      41      77 ..       8      44 ..       2      52 .. 0.77
   2 ?    3.0   0.1     0.021        95      19      45 ..      91     120 ..      70     124 .. 0.78
   3 ?   -1.7   0.0      0.62   2.8e+03      61      71 ..     186     196 ..     174     198 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0008
   PF12587.3 41 vnrdgetvhaParsksGsapegat..arCrDGsysfsrh 77
                + r g+++ +Pa  ++G+a +g+t  a C DG    ++ 
  MMETSP1325-20131115|3525_1  8 RRRLGREMATPA--RDGEAATGTTimACCFDGGVVMGAD 44
                667899999***..77777777765599****9887765 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.021
   PF12587.3  19 pafAqt...asaatdeadLdrhdtyvnrdg 45 
                 +a+ +    a++++ +a L r+  y n+d 
  MMETSP1325-20131115|3525_1  91 AAHSTEvgrAPTVKTAATLARRIAYENKDN 120
                 444444444888899*************95 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 0.62
   PF12587.3  61 egatarCrDGs 71 
                 + a+a  rDGs
  MMETSP1325-20131115|3525_1 186 SIAHAMARDGS 196
                 45888899997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1147.19
//
Query:       MMETSP1325-20131115|3527_1  [L=334]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-88  296.3   0.3      2e-88  295.9   0.2    1.2  1  PF05153.10 Family of unknown function (DUF706)
     0.0084   15.9   0.1      0.039   13.8   0.0    2.1  2  PF01966.17 HD domain


Domain annotation for each model (and alignments):
>> PF05153.10  Family of unknown function (DUF706)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.9   0.2   2.9e-92     2e-88       2     253 .]      69     334 .]      67     334 .] 0.91

  Alignments for each domain:
  == domain 1    score: 295.9 bits;  conditional E-value: 2.9e-92
  PF05153.10   2 eeakdrvkefykeqhtkqtvdfvkkarkefk...kkkrakmtiwealellnelvdesdPdvdlsqiehllqtaeairrdygkkdWlqltglihdlGkvlllf.....kae......pqWavvGdtfpvGCkfsekivykesfkenpdlknekyntklGiykencGldnvllswghdeylykvlkenkstlpeealamiryhsfypwhkegaykhlmnekdeellkavkafnkydlysksee.kvdveelkPyyqelidky.lpevlkw 253
                 ee++ rv+e+y+++  + tv+f ++++ ++     + r +mt++ea   l++ vd sdPd+dl+++ hllqtaeair+d g++dW+ql+gl+hd+Gk++ l+     + +      +qW+  Gdtf+vGC+  + +v++++ k npd++n+k+nt +G+y+ +cGld ++++wghdey +++l  n++++p+++l m+ryhs yp+h +gaykhl + +dee l++++ fnkydly+k++e + d +el Pyy el dky l ++l+w
  MMETSP1325-20131115|3527_1  69 EETSPRVREHYRQMRLNHTVEFYERMEVKYDfskGQCRREMTLTEAFAELEDYVDVSDPDLDLPNLVHLLQTAEAIRKD-GHPDWMQLVGLLHDIGKIMFLWgsreeG-QesgadgQQWSLGGDTFVVGCEIPDCVVFPQFNKLNPDMQNPKLNTAHGMYEAHCGLDALKFAWGHDEYAWRMLVANNTSIPQAGLDMVRYHSAYPMHDKGAYKHLLKPEDEERLEWITIFNKYDLYTKDQEnMLDPKELLPYYLELADKYgLGGKLRW 334
                 456789*****************9999988744356689****************************************.*********************8443320.122233369************************************************************************************************************************876157****************44447776 PP

>> PF01966.17  HD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   5.6e-06     0.039      16      43 ..     141     168 ..     132     185 .. 0.76
   2 ?   -2.0   0.0      0.46   3.1e+03      36      36 ..     274     274 ..     240     301 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.6e-06
                 CHHHHHHHHHHHHHHHHHHTTHHHHS.. CS
  PF01966.17  16 aedlgeeedrellrlaaLlHDiGkgpfg 43 
                 ae + ++  +++ +l +LlHDiGk+ f 
  MMETSP1325-20131115|3527_1 141 AEAIRKDGHPDWMQLVGLLHDIGKIMFL 168
                 3444445789**************9865 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.46
                 T CS
  PF01966.17  36 D 36 
                 D
  MMETSP1325-20131115|3527_1 274 D 274
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1569.38
//
Query:       MMETSP1325-20131115|3531_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-36  124.6   0.2    6.1e-36  124.3   0.2    1.0  1  PF08190.7 pre-RNA processing PIH1/Nop17


Domain annotation for each model (and alignments):
>> PF08190.7  pre-RNA processing PIH1/Nop17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.3   0.2   4.5e-40   6.1e-36      28     165 ..       7     151 ..       3     159 .. 0.88

  Alignments for each domain:
  == domain 1    score: 124.3 bits;  conditional E-value: 4.5e-40
   PF08190.7  28 vkPepgfciktsvagge........kvFiNvCqseripaPeeeeeltageegeaelkwriPyslgqpreekdkkgkpckvyDvvfnpdtlqkaekdk..efrkflialaleaieqkyevtLnreelkvlkfkykGslepqrirlkkpk 165
                 + Pe gf+ikt++ +++        kvFiN Cq+e +++P+  ++  + +ege+ +   +P+s+g+pr+  d+kg +  vyD v++p++++ a++d+  + ++fl++lal+++eqky+ +L+ +++k++k+ ykG+ ++qri+ +++ 
  MMETSP1325-20131115|3531_1   7 ITPESGFVIKTKRVDEAgtkpgaaeKVFINLCQHEGVEKPV-MKKRLN-DEGEEVEGLNVPLSVGPPRACDDAKGVKAIVYDCVVHPSVIDEAREDEtgNQQNFLCQLALQYVEQKYKCELD-RKYKLPKASYKGERATQRIKDRSKA 151
                 78*********98765335566789***************7.444444.358999**************************************998733789********************.*******************988665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 672.66
//
Query:       MMETSP1325-20131115|3529_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-22   80.5   0.2    2.5e-22   79.9   0.1    1.3  1  PF13602.1  Zinc-binding dehydrogenase
    4.6e-11   42.2   1.2    6.6e-11   41.7   0.9    1.2  1  PF00107.21 Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> PF13602.1  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   0.1   3.7e-26   2.5e-22       2     127 .]      60     195 ..      59     195 .. 0.76

  Alignments for each domain:
  == domain 1    score: 79.9 bits;  conditional E-value: 3.7e-26
   PF13602.1   2 Gadevidyrdedf......lagdgvDvvldtvg.eageelleallrvl..ggGrlvsigg..........klltaaareggaarkllflfsvkaneeraeeleelaalveaGklkpvvdrvfpLeeaaeAhrrlesgrarGKiVl 127
                 Ga +v++y++e+f      ++g+gvD++ld++g    + +++a   +l    G ++ i +          +++++    g ++ ++l ++   +    +  ++++ alve+G l p +d+v+pLe+aa A +rle+g+a GKi+l
  MMETSP1325-20131115|3529_1  60 GASAVVNYKAEQFeeaeavVGGGGVDIILDCIGtDYEARAMRAG--LLdrRTGVYINILKdehdlistlhGVVRWLL--GLGPKYGLGVV--LP---EQRVMQRVSALVEQGLLVPEIDSVWPLEQAATATERLETGHAHGKIIL 195
                 99*******99999*****999***********55555554443..4686559999999657766665433333333..22333333332..23...3456******************************************98 PP

>> PF00107.21  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.9   9.7e-15   6.6e-11       1      70 [.      26      94 ..      26     114 .. 0.90

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 9.7e-15
                ----HHHHHHHHH-.-EEEEEESSHHHHHHHHH----EEEETTTS-HHHHHHHHTTT--BSEEEEET-.CT CS
  PF00107.21  1 GvGlaavqlAkalG.arviavdsseeklelakelGadhvinskdedfvkaireltggkgvdvviecvgaga 70
                GvG+ avq+A  +   +v++++s     +la + Ga +v+n+k e f++a + + gg gvd++++c+g  +
  MMETSP1325-20131115|3529_1 26 GVGHVAVQYASRVLgLEVVGTASPGASTDLAIKSGASAVVNYKAEQFEEAEAVVGGG-GVDIILDCIG-TD 94
                9*********88777********************************9998888777.**********.55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1134.60
//
Query:       MMETSP1325-20131115|3532_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   14.5   0.1          1    9.5   0.1    2.7  3  PF00560.28 Leucine Rich Repeat
       0.12   11.7   0.0       0.13   11.6   0.0    1.1  1  PF12419.3  SNF2 Helicase protein


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00015         1       2      22 .]       9      32 ..       8      32 .. 0.89
   2 ?   -2.5   0.0       1.3     9e+03       7      16 ..      40      50 ..      39      52 .. 0.70
   3 ?    2.0   0.0     0.042   2.9e+02       5      19 ..      72      89 ..      69      92 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00015
                ESEEEETSS.BCB.CHHHH.HHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slpps.lsnL 22
                ++ L+L ++ +l+ +l+p+ + +L
  MMETSP1325-20131115|3532_1  9 ITDLNLENCrKLEgHLSPEmFTQL 32
                678***************999876 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.3
                ETSSBCB.CHH CS
  PF00560.28  7 LsgNnlt.slp 16
                L ++ ++ + p
  MMETSP1325-20131115|3532_1 40 LKRCGIKvTMP 50
                67888886666 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.042
                EEETSS.BCB.CHHHH.H CS
  PF00560.28  5 LdLsgN.nlt.slpps.l 19
                 dLsg  nl    pp+ +
  MMETSP1325-20131115|3532_1 72 VDLSGMsNLAgVMPPNiF 89
                79***9899988999866 PP

>> PF12419.3  SNF2 Helicase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.9e-05      0.13       8      40 ..      21      53 ..      14      75 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.9e-05
   PF12419.3  8 sleltaeeaaeflkeaapaleaaGvgVllPkel 40
                + +l++e   ++l+ +a+ l+++G++V +P++ 
  MMETSP1325-20131115|3532_1 21 EGHLSPEMFTQLLEGKANFLKRCGIKVTMPSAG 53
                557999************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|3533_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-06   25.9   0.5     0.0069   15.8   0.1    3.1  2  PF12799.2  Leucine Rich repeats (2 copies)
    0.00036   20.1   4.3        2.6    8.5   0.0    4.7  4  PF13504.1  Leucine rich repeat
    0.00054   19.5   4.2         14    6.0   0.0    4.8  4  PF00560.28 Leucine Rich Repeat
     0.0058   16.2   1.0        0.1   12.2   0.5    2.6  3  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.028   14.3   5.2       0.47   10.5   0.0    4.1  5  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   2.5e-06    0.0069       2      37 ..      26      87 ..       1      95 [. 0.82
   2 !    9.5   0.1   0.00025      0.68       1      34 [.      73     108 ..      73     121 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.5e-06
   PF12799.2  2 nLevLdLsnN.........................nIkd.lppelanLpnLktLnLsnNp.is 37
                 L++LdL+n+                         nIk  l+  +a++pnLktL ++n+p i+
  MMETSP1325-20131115|3533_1 26 GLQSLDLINCrelrgsvkslmslkgcteinlyscvNIKGpLKS-FASMPNLKTLCIANCPkIT 87
                6888888888888887777777776677766666788855888.999***********96465 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00025
   PF12799.2   1 tnLevLdLsnN.nIk.dlppelanLpnLktLnLsnN 34 
                 +nL++L ++n+ +I+ +l++++   pnL  +nL+++
  MMETSP1325-20131115|3533_1  73 PNLKTLCIANCpKITgKLKAVVEFGPNLAAINLAGT 108
                 7*********9559988**999999***99999985 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.054   1.5e+02       3      13 ..       2      13 ..       1      21 [. 0.75
   2 !    6.0   0.4     0.006        17       2      13 ..      26      38 ..      25      64 .. 0.90
   3 !    8.5   0.0   0.00096       2.6       1      14 [.      73      87 ..      73      91 .. 0.89
   4 ?   -0.9   0.0       1.3   3.5e+03       2      14 ..      99     112 ..      98     121 .. 0.59

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.054
   PF13504.1  3 LkeLdLsgnr.L 13
                L +L+L+g++  
  MMETSP1325-20131115|3533_1  2 LVTLSLRGCYrV 13
                779******644 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.006
   PF13504.1  2 nLkeLdLsgnr.L 13
                 L+ LdL ++r L
  MMETSP1325-20131115|3533_1 26 GLQSLDLINCReL 38
                69********976 PP

  == domain 3    score: 8.5 bits;  conditional E-value: 0.00096
   PF13504.1  1 pnLkeLdLsgnr.Lt 14
                pnLk+L +++++ +t
  MMETSP1325-20131115|3533_1 73 PNLKTLCIANCPkIT 87
                7**********8787 PP

  == domain 4    score: -0.9 bits;  conditional E-value: 1.3
   PF13504.1   2 nLkeLdLsgnr.Lt 14 
                 nL   +L+g++ Lt
  MMETSP1325-20131115|3533_1  99 NLAAINLAGTDgLT 112
                 66666776654454 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0     0.005        14       2      15 ..       2      17 ..       1      24 [. 0.83
   2 ?    4.5   0.2     0.016        44       2      13 ..      27      39 ..      26      51 .. 0.78
   3 ?    2.0   0.0      0.11     3e+02       3      17 ..      52      68 ..      50      72 .. 0.78
   4 ?    4.8   0.0     0.013        35       1      14 [.      74      89 ..      74     121 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.005
                ESEEEETSS.BCB.CH CS
  PF00560.28  2 LeeLdLsgN.nlt.sl 15
                L +L+L+g+ ++t +l
  MMETSP1325-20131115|3533_1  2 LVTLSLRGCyRVTgDL 17
                889******9998776 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.016
                ESEEEETSS.BCB CS
  PF00560.28  2 LeeLdLsgN.nlt 13
                L++LdL ++  l 
  MMETSP1325-20131115|3533_1 27 LQSLDLINCrELR 39
                9********7776 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.11
                SEEEETSS.BCB.CHHH CS
  PF00560.28  3 eeLdLsgN.nlt.slpp 17
                +e++L ++ n++  l +
  MMETSP1325-20131115|3533_1 52 TEINLYSCvNIKgPLKS 68
                689*****999866655 PP

  == domain 4    score: 4.8 bits;  conditional E-value: 0.013
                TESEEEETSS.BCB.C CS
  PF00560.28  1 nLeeLdLsgN.nlt.s 14
                nL++L + ++ ++t +
  MMETSP1325-20131115|3533_1 74 NLKTLCIANCpKITgK 89
                89********999866 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.3    0.0028       7.7      23      36 ..      23      36 ..       1      62 [. 0.51
   2 !   12.2   0.5   3.7e-05       0.1       2      59 ..      26      83 ..      25      84 .. 0.81
   3 !    8.0   0.0   0.00079       2.2      20      39 ..      68      88 ..      52     111 .. 0.59

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0028
   PF13855.1 23 glsnLkvLdLsgnn 36
                +l+ L++LdL +++
  MMETSP1325-20131115|3533_1 23 HLTGLQSLDLINCR 36
                56677777776333 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 3.7e-05
   PF13855.1  2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                 L++LdL n+r  + +  ++ +l+  ++++L ++  +  + ++f+++p+L+ L + ++
  MMETSP1325-20131115|3533_1 26 GLQSLDLINCRELRGSVKSLMSLKGCTEINLYSCVNIKGPLKSFASMPNLKTLCIANC 83
                79********4444456799999999******6655677889*********9977665 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.00079
   PF13855.1 20 aFkglsnLkvLdLs.gnnlks 39
                +F +++nLk+L +  + +++ 
  MMETSP1325-20131115|3533_1 68 SFASMPNLKTLCIAnCPKITG 88
                677777777776664444444 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.54   1.5e+03       4      14 ..       2      13 ..       1      21 [. 0.75
   2 ?    2.3   0.2     0.081   2.2e+02       2      13 ..      25      36 ..      24      49 .. 0.81
   3 ?   -0.5   0.0      0.65   1.8e+03       4      12 ..      51      59 ..      43      70 .. 0.69
   4 ?   10.5   0.0   0.00017      0.47       1      16 [.      72      88 ..      72      94 .. 0.86
   5 ?   -1.9   0.0       1.9   5.1e+03       3      13 ..      99     109 ..      98     119 .. 0.58

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.54
   PF13516.1  4 LtsLdLsnNq.i 14
                L +L L ++  +
  MMETSP1325-20131115|3533_1  2 LVTLSLRGCYrV 13
                789999999644 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.081
   PF13516.1  2 knLtsLdLsnNq 13
                + L+sLdL n+ 
  MMETSP1325-20131115|3533_1 25 TGLQSLDLINCR 36
                5699***98885 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.65
   PF13516.1  4 LtsLdLsnN 12
                 t+++L ++
  MMETSP1325-20131115|3533_1 51 CTEINLYSC 59
                456688777 PP

  == domain 4    score: 10.5 bits;  conditional E-value: 0.00017
   PF13516.1  1 lknLtsLdLsnNq.igd 16
                ++nL++L++ n++ i++
  MMETSP1325-20131115|3533_1 72 MPNLKTLCIANCPkITG 88
                69**********86775 PP

  == domain 5    score: -1.9 bits;  conditional E-value: 1.9
   PF13516.1   3 nLtsLdLsnNq 13 
                 nL  ++L +++
  MMETSP1325-20131115|3533_1  99 NLAAINLAGTD 109
                 55556666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.67
# Mc/sec: 497.15
//
Query:       MMETSP1325-20131115|3534_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      6e-11   41.6   1.0    6.5e-11   41.5   0.7    1.0  1  PF08449.6 UAA transporter family
  ------ inclusion threshold ------
      0.017   13.8   1.4      0.019   13.7   1.0    1.0  1  PF05987.8 Bacterial protein of unknown function (DUF898)
      0.055   12.5   1.3      0.064   12.3   0.9    1.1  1  PF06912.6 Protein of unknown function (DUF1275)


Domain annotation for each model (and alignments):
>> PF08449.6  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.7   1.4e-14   6.5e-11       5      98 ..       2      93 ..       1      94 [] 0.96

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 1.4e-14
   PF08449.6  5 isgifvgylsngvlqEkivkrepgskfgnlltfvqflvvalvgllellktkklkkrkiplktYvlivalfflssvlnneaLkyisyPtqvifkS 98
                ++gi+++++ +g+++E+ ++  ++  +   l++v ++++++ ++l ++++  + +  +p+++ ++++++ ++s+ ++  +L+y+ +P+qv++kS
  MMETSP1325-20131115|3534_1  2 FVGIMGSFVCYGMVLEYATSGGRKL-HEFSLILVTSAIYSATAFLGRIFQR-EAPTSVPTYKLAVLAMTSMGSTFTSVRSLRYVIFPVQVLAKS 93
                68****************9999888.9999******************999.*****************************************9 PP

>> PF05987.8  Bacterial protein of unknown function (DUF898)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.0   4.3e-06     0.019      52     112 ..      12      83 ..       5      85 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.3e-06
   PF05987.8  52 dgspfeYtgtglelllGfLialvllvlyliavqlvplla...........lvlllllvlllpllivrarrYr 112
                  g+ +eY  +g+++l  f ++lv  ++y+++ +l  +++           l++l++  +   +  vr++rY 
  MMETSP1325-20131115|3534_1  12 YGMVLEYATSGGRKLHEFSLILVTSAIYSATAFLGRIFQreaptsvptykLAVLAMTSMGSTFTSVRSLRYV 83 
                 6899*******************************6666667777666658888888888888889*****6 PP

>> PF06912.6  Protein of unknown function (DUF1275)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.9   1.4e-05     0.064      61     134 ..       7      84 ..       1      90 [. 0.62

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.4e-05
   PF06912.6  61 lGaalagll.kraarrrrrrsrlallllleavllliaallgaalpnte....avlvtiallafamGlqnaafrklsgae 134
                 ++ ++ g++ ++a+++ r+ ++++l+l++ a+  + a l g  ++  +     ++ + +l+  +mG   +++r+l++  
  MMETSP1325-20131115|3534_1   7 GSFVCYGMVlEYATSGGRKLHEFSLILVTSAIYSATAFL-GRIFQREAptsvPTYKLAVLAMTSMGSTFTSVRSLRYVI 84 
                 334444444455566777777777777777666655555.333333333445888888999999999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 409.56
//
Query:       MMETSP1325-20131115|3530_1  [L=439]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-36  124.8   2.1    3.9e-36  124.2   1.4    1.3  1  PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain
      8e-33  113.2   0.0    1.9e-32  112.0   0.0    1.7  1  PF02771.11 Acyl-CoA dehydrogenase, N-terminal domain
    1.7e-16   59.3   1.8    3.2e-16   58.4   1.3    1.5  1  PF02770.14 Acyl-CoA dehydrogenase, middle domain
    4.7e-14   52.6   0.2    1.2e-13   51.4   0.1    1.6  1  PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00441.19  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.2   1.4   1.1e-39   3.9e-36       7     147 ..     288     429 ..     281     432 .. 0.94

  Alignments for each domain:
  == domain 1    score: 124.2 bits;  conditional E-value: 1.1e-39
                 -HHHHHHHHHH--------HHHHHHHHHHHHHH-------GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTS-.HHHHHHHHHHHHHHHHHHHHHHHHH---GGGBTTSSHHHHHHHHTTTTT-------HHHHHHH CS
  PF00441.19   7 ametlnheRlliaaaalglarraleealeyakqrkafgkplidfqlireklaemaaeleaarllvyraaealdagkpd.saeaslaKllaselaqevadeamqllGgrGyaeeyplerlyrdarvlrigeGtseiqrniiar 147
                 +m++l++eR+++aa++lg+arr++e + +ya +r+afg p+ +f  +++++a+ +ae  a r+++y++a+ ld      + +a  +Kl+++++  +vad+a+q+lGg+Gy+ ey++e+l+rda++l+ig+Gt+e +   + r
  MMETSP1325-20131115|3530_1 288 MMRNLEIERITLAAMSLGIARRSVEVMNNYAAERHAFGEPINAFGQMQRHIADSYAEYMAGRAYTYNVARHLDLSSYGnGLDADGVKLFCAKMGKDVADRAIQVLGGNGYTGEYAVEQLWRDAKLLEIGGGTNEAHHKNMVR 429
                 5677******************************************************************9999998889******************************************************98776655 PP

>> PF02771.11  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.0   0.0   5.6e-36   1.9e-32       1     112 [.      53     164 ..      53     165 .. 0.98

  Alignments for each domain:
  == domain 1    score: 112.0 bits;  conditional E-value: 5.6e-36
                 -HHHHHHHHHHHHHHHHHTTTTHHHHHHHT---HHHHHHHHH---TSTTS-TT-------HHHHHHHHHHHHHH--TTCHHHHHHHHCCHHHHHH---HHHHHHHHHHHHCS CS
  PF02771.11   1 teeqealrdevrefaeeelapeaaewdeeeefprelwrklaelGllgitvpeeyGGagldalelalvleelaradaglavalgvhsslvapailrfGteeqkkkyLpklasg 112
                 tee+++lr++vr+f + e++p+a e++++e+f rel++k +elGllg+tv eeyGG+g+da+++++v ee+++ad ++++++ +hs+l ++ + + G+ eqk +yLp+ ++g
  MMETSP1325-20131115|3530_1  53 TEEHAMLRETVRAFSDSEIRPQALEYNRAEKFNRELFNKCGELGLLGVTVDEEYGGSGMDAVAACIVHEEMSAADPAFTLSYLAHSMLFVNNLSQNGSHEQKLRYLPDACTG 164
                 89************************9999**************************************************999*******9******************998 PP

>> PF02770.14  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   1.3   9.4e-20   3.2e-16       1      52 []     169     227 ..     169     228 .. 0.94

  Alignments for each domain:
  == domain 1    score: 58.4 bits;  conditional E-value: 9.4e-20
  PF02770.14   1 alalTEpgaGsDvanlsTtArrdgdg..yvlnGtKwfisnggia.....dlalvlartd 52 
                 +++++EpgaG+Dv +++TtA++  dg  y+lnG+K++i+ng+       d +l++art+
  MMETSP1325-20131115|3530_1 169 GMGMSEPGAGTDVLGMKTTATKSADGstYTLNGSKMWITNGTLDgqttgDAYLIYARTG 227
                 589**************************************77777788********95 PP

>> PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.1   3.4e-17   1.2e-13       2     125 ..     298     412 ..     297     415 .. 0.91

  Alignments for each domain:
  == domain 1    score: 51.4 bits;  conditional E-value: 3.4e-17
                 --HHHH---HHHHHHHHHHHHTT-B-S----B----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHTT---GGGBTT-HHHHHHHHHHH CS
   PF08028.6   2 gfaavalGaargalaafierarervraaggaklaedpatqlrlAeaaaeldaAralleraaerlealadrgaevtpeeraearrdaalavelavaavdrlfeaaGgsalfkesplqRfwRDaha 125
                 ++aa++lG+ar+ ++ +  +a+er+   +g++++ +  +q+ +A++ ae  a ra  +++a+   +l   g         +a   + + +++  +++dr++++ Gg+++  e+ ++ +wRDa+ 
  MMETSP1325-20131115|3530_1 298 TLAAMSLGIARRSVEVMNNYAAERHA--FGEPINAFGQMQRHIADSYAEYMAGRAYTYNVARH-LDLSSYGN------GLDADGVKLFCAKMGKDVADRAIQVLGGNGYTGEYAVEQLWRDAKL 412
                 689***********************..********************************997.33444444......4578888************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 1845.62
//
Query:       MMETSP1325-20131115|3536_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.041   13.7   0.5      0.061   13.2   0.4    1.2  1  PF08895.6 Domain of unknown function (DUF1840)


Domain annotation for each model (and alignments):
>> PF08895.6  Domain of unknown function (DUF1840)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.4   4.4e-06     0.061      37      92 ..      18      73 ..      13      86 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.4e-06
   PF08895.6 37 itaeelpaAiakLeaaiaeeaaekeeeaeeeedeeeeeeeeeavsLaqRalPllel 92
                i+++ +++A++ L a+  +e a+++ ++ +  + e+ +++e++ ++++Ra+P +e 
  MMETSP1325-20131115|3536_1 18 IQEQHIDDAHQDLPAEAVAEVAHERVDHGRPLALEDVDRDEHEHGVGRRAVPVIEG 73
                88999********8766566444444555556899999999*************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.61
# Mc/sec: 573.55
//
Query:       MMETSP1325-20131115|3535_1  [L=275]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-22   77.6   0.0    9.2e-22   77.2   0.0    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
      4e-08   32.9   0.0    4.7e-08   32.7   0.0    1.0  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
     0.0044   16.5   0.0     0.0069   15.9   0.0    1.3  1  PF13108.1  Protein of unknown function (DUF3969)


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.0     2e-25   9.2e-22     136     264 ..      47     260 ..      26     273 .. 0.92

  Alignments for each domain:
  == domain 1    score: 77.2 bits;  conditional E-value: 2e-25
                 HHHHC-EEEEEEEEETTCEEE.....................................................................EEEECCB-SEEEEEEE-EEEETTTTEEEE-----B--SEEE-GGGBSCHHH...............--BTTSSCEEEEEEEEEE---TT---EEEEEE.SS-TT-EEEEETTEEEEE-HHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxx.....................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00443.24 136 itdlfkgqlksrlkclecknv.....................................................................kvklkrlPeiLiihlkRfkyseerssnkKlnekvefpleLdlssyvneekk...............eeseskpkkYeLvavvvHsGslssGHYvayvk.nneknkWlkfdDetvtevkeeevlk 264
                 i+  ++ +l ++++cl+c+ v                                                                     +  ++rlP +L++hl R  +++ +   +Kl+++v fpl+L + ++ +++ +                 s  +p +Y L++vvvH+Gs++ GHY+++ k +++  +W++++De+v++ + e++++
  MMETSP1325-20131115|3535_1  47 IDAFMRPELVDDVECLRCTVVqrmeeleknaeflrqtvehvpseeaaelerelatteterrrlatlpltqdasdvaalasvpavrskaskQYVFSRLPSVLCFHLGRRCFDSRTGHMSKLRQHVAFPLTLSMAQFSAYGGAcggvvsldppaassaGGSAVEPFRYTLSSVVVHHGSSDAGHYTTFRKlRERGASWVHVSDEQVQAASVEQAFQ 260
                 56666777888999999999999999999999*********************************************************************************************************9988*************98888999**************************8888889**********999666665 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0     1e-11   4.7e-08     143     295 .]       7     250 ..       1     265 [. 0.88

  Alignments for each domain:
  == domain 1    score: 32.7 bits;  conditional E-value: 1e-11
   PF13423.1 143 k.vkeesllnlelpyppsek.............giklenileeslnseknkeikcesckkkss................................................................aevakkftslPpiLgIclkrynek.efg.akrlntkvdiplelrlphf............iqddeqenek...plsgefkyeLqavVchigdsltsghlvSlirvaeseksqWylFnDfrv 295
                 + +k +++++++l +p++ +             g++le++++ +++ e ++ + c  c   +                                                                 a+ +  f++lP +L  +l+r   + + g   +l + v +pl+l + +f            +  d         +  + f y L +vV h g+  + gh+ ++ + + ++   W+   D+ v
  MMETSP1325-20131115|3535_1   7 RaIKNTPFIDVSLALPATGSgagfaapasysqaGCRLEDCIDAFMRPELVDDVECLRCTVVQRmeeleknaeflrqtvehvpseeaaelerelatteterrrlatlpltqdasdvaalasvpavrskASKQYVFSRLPSVLCFHLGRRCFDsRTGhMSKLRQHVAFPLTLSMAQFsayggacggvvsL--DPPAASSaggSAVEPFRYTLSSVVVHHGS-SDAGHYTTFRKLR-ERGASWVHVSDEQV 250
                 447888888888888885555566666666666************************99998899**************************************************************999*******************99777789****************************652..333333335688999*************9.9********9998.55568998888765 PP

>> PF13108.1  Protein of unknown function (DUF3969)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.5e-06    0.0069      60     107 ..      39      87 ..      38      88 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.5e-06
   PF13108.1  60 kGmeLEDi.esllpekLedtIddlktkclellselekeeeesdknlkiv 107
                  G+ LED  +  + ++L d ++ l + ++++++elek++e+ +++++ v
  MMETSP1325-20131115|3535_1  39 AGCRLEDCiDAFMRPELVDDVECLRCTVVQRMEELEKNAEFLRQTVEHV 87 
                 69*****65999********************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.54
# Mc/sec: 1220.37
//
Query:       MMETSP1325-20131115|3537_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 580.45
//
Query:       MMETSP1325-20131115|3539_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|3538_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|3540_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-07   31.6   0.0    1.6e-07   31.3   0.0    1.1  1  PF00300.17 Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   1.2e-11   1.6e-07       1      40 [.      21      58 ..      21      67 .. 0.89

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 1.2e-11
                EEEEEE---BHCCCTTBGGGTCC--B-----HHHHHHHTH CS
  PF00300.17  1 rlylvRHGeselnkegrlqgwsdvpLtekGreqarelgkk 40
                +ly+ RHG+se+n++gr+ g+sd  Lte G++ a +l + 
  MMETSP1325-20131115|3540_1 21 KLYFSRHGQSEYNAAGRIGGDSD--LTEMGERYALALKEF 58
                69*********************..*********999843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 349.47
//
Query:       MMETSP1325-20131115|3542_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-25   84.5   3.7      1e-07   30.9   0.0    3.3  3  PF00806.14 Pumilio-family RNA binding repeat
     0.0083   15.8   0.1      0.055   13.1   0.0    2.1  2  PF03540.8  Transcription initiation factor TFIID 23-30kDa subunit
  ------ inclusion threshold ------
      0.013   15.0   0.2       0.83    9.2   0.0    2.6  3  PF07624.6  Protein of unknown function (DUF1585)


Domain annotation for each model (and alignments):
>> PF00806.14  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   2.2e-11     1e-07       1      30 [.       6      35 ..       6      38 .. 0.88
   2 !   27.0   0.1   3.8e-10   1.7e-06       4      35 .]      45      76 ..      42      76 .. 0.91
   3 !   26.5   0.1   5.4e-10   2.5e-06       9      35 .]     101     127 ..      98     127 .. 0.93

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 2.2e-11
  PF00806.14  1 sikgnlvqLstdqyGnyvvQkllehateeq 30
                +i+ n+  L++dqyGnyvvQ+++++  +e+
  MMETSP1325-20131115|3542_1  6 EIIVNIDGLIQDQYGNYVVQHVIQYGRPED 35
                57889*******************977765 PP

  == domain 2    score: 27.0 bits;  conditional E-value: 3.8e-10
  PF00806.14  4 gnlvqLstdqyGnyvvQkllehateeqkklil 35
                 nl+++++++++++vv+k+l++   eqk  i+
  MMETSP1325-20131115|3542_1 45 ANLLSMAQHKFASNVVEKCLQYGNQEQKTTII 76
                699*******************9999998775 PP

  == domain 3    score: 26.5 bits;  conditional E-value: 5.4e-10
  PF00806.14   9 LstdqyGnyvvQkllehateeqkklil 35 
                 +++dqy+nyv+Qk+++ a+  q ++i+
  MMETSP1325-20131115|3542_1 101 MIKDQYANYVIQKVIDLADQRQLENIM 127
                 689****************99999986 PP

>> PF03540.8  Transcription initiation factor TFIID 23-30kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   1.2e-05     0.055      26      47 ..      46      67 ..      44      71 .. 0.90
   2 ?   -0.2   0.0      0.17   7.9e+02      24      42 ..     111     129 ..     105     136 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.2e-05
   PF03540.8 26 rLlsLaaqKFvsDiaadalqya 47
                 Lls+a +KF s++++++lqy 
  MMETSP1325-20131115|3542_1 46 NLLSMAQHKFASNVVEKCLQYG 67
                69******************96 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.17
   PF03540.8  24 vkrLlsLaaqKFvsDiaad 42 
                 +++ + La q+ + +i+++
  MMETSP1325-20131115|3542_1 111 IQKVIDLADQRQLENIMTE 129
                 7889999999999999986 PP

>> PF07624.6  Protein of unknown function (DUF1585)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.5     7e+03      21      35 ..      17      31 ..      16      31 .. 0.70
   2 ?    9.2   0.0   0.00018      0.83      13      36 ..      44      68 ..      39     102 .. 0.72
   3 ?    3.5   0.0     0.011        50      33      57 ..     108     132 ..      92     139 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 1.5
   PF07624.6 21 dqfarslieklltYA 35
                dq  + +++++++Y+
  MMETSP1325-20131115|3542_1 17 DQYGNYVVQHVIQYG 31
                566666788888886 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00018
   PF07624.6 13 kklLler.kdqfarslieklltYAl 36
                 + Ll+  + +fa +++ek l+Y+ 
  MMETSP1325-20131115|3542_1 44 NANLLSMaQHKFASNVVEKCLQYGN 68
                566666669**************95 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.011
   PF07624.6  33 tYAlGRslefsDraevdeilaklka 57 
                  Y + + ++ +D+++++ i+++l+a
  MMETSP1325-20131115|3542_1 108 NYVIQKVIDLADQRQLENIMTELRA 132
                 4555666777888888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       783  (0.0572703); expected 273.4 (0.02)
Passed bias filter:                      562  (0.0411059); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 788.80
//
Query:       MMETSP1325-20131115|3543_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 352.19
//
Query:       MMETSP1325-20131115|3544_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-17   62.1   0.2    9.7e-17   60.2   0.0    2.2  2  PF04542.9  Sigma-70 region 2
    6.2e-17   61.1   5.4    9.7e-12   44.5   0.6    3.0  3  PF04539.11 Sigma-70 region 3
    1.7e-13   49.5   0.5    1.8e-12   46.2   0.1    2.4  2  PF04545.11 Sigma-70, region 4
  ------ inclusion threshold ------
       0.02   14.9   0.4       0.21   11.7   0.0    2.5  2  PF13560.1  Helix-turn-helix domain
      0.071   12.6   0.0       0.25   10.9   0.0    1.9  1  PF13384.1  Homeodomain-like domain
      0.082   12.4   0.1          4    7.0   0.0    2.6  3  PF13413.1  Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> PF04542.9  Sigma-70 region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       0.9   2.1e+03      52      67 ..      25      42 ..       8      45 .. 0.64
   2 !   60.2   0.0   4.3e-20   9.7e-17       1      70 [.      50     119 ..      50     120 .. 0.94

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.9
                HHHHHH-..--HHHHHHT CS
   PF04542.9 52 wlltiir..naildalrr 67
                w+  ++   n+ +d++r 
  MMETSP1325-20131115|3544_1 25 WASAVAWnsNELRDFVRT 42
                555555544777777776 PP

  == domain 2    score: 60.2 bits;  conditional E-value: 4.3e-20
                 HHHHHHHHHHHHHHHHS-TTS-HHHHHH------HHHHHTTSS--HHHHHHHHHHHH---HHHHHHTS-- CS
   PF04542.9   1 lverylplvrrlarrllgsgadaeDlvQeaflrllraverfdpergvkfsawlltiirnaildalrrrrr 70 
                 l+ +++ l++++a+ +  +ga ++Dl+Qe++l+l+ a+erfd+++g++fs++++ +ir++i  ++  ++r
  MMETSP1325-20131115|3544_1  50 LINKHYALIVSVAKIYDIHGAPFQDLIQEGMLGLIIAAERFDDTKGTRFSTYATYWIRQRISSFVHNNAR 119
                 7899********************************************************9888776665 PP

>> PF04539.11  Sigma-70 region 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   1.6e-06    0.0037       5      49 ..       4      48 ..       1      50 [. 0.93
   2 !   44.5   0.6   4.2e-15   9.7e-12       4      77 ..     132     204 ..     130     205 .. 0.97
   3 ?   -0.1   0.0      0.35     8e+02      23      42 ..     244     263 ..     237     274 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.6e-06
  PF04539.11  5 kikraqreLeqelgRePtpeEiAeelgiseekvrevleaarepvs 49
                ++ r ++ L+ +l+R+P++eE A ++ +   ++r+ ++ +++++s
  MMETSP1325-20131115|3544_1  4 ELVRQRAALAKKLERAPSDEEWASAVAWNSNELRDFVRTSQSSQS 48
                67788999**********************************998 PP

  == domain 2    score: 44.5 bits;  conditional E-value: 4.2e-15
  PF04539.11   4 nkikraqreLeqelgRePtpeEiAeelgiseekvrevleaarepvsldlpvgeeedgelgdlleddeaespeda 77 
                   +++++r L+ elgReP+++E+A++  is ek++ ++  + e+ sl+      e+ +lgd ++ + ++sped+
  MMETSP1325-20131115|3544_1 132 GVVEKTKRSLQLELGREPSIDELAAASKISREKLQLYTDSSAEVYSLERTLDAYENLRLGDRVAAT-QPSPEDM 204
                 6799**************************************************************.*****98 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.35
  PF04539.11  23 peEiAeelgiseekvrevle 42 
                  +E+ +++ +s + vr++  
  MMETSP1325-20131115|3544_1 244 LDEVGAAVSVSRDTVRRIEA 263
                 67999999999999998755 PP

>> PF04545.11  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.13   2.9e+02      11      35 ..     139     163 ..     134     164 .. 0.80
   2 !   46.2   0.1   7.8e-16   1.8e-12       4      50 .]     221     271 ..     220     271 .. 0.97

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.13
                 HHHHHHHTST--CCCHHHHHTS-HH CS
  PF04545.11  11 evlelrfgeglTleEiGerlgisre 35 
                 + l+l  g++ +  E+++   isre
  MMETSP1325-20131115|3544_1 139 RSLQLELGREPSIDELAAASKISRE 163
                 5566777888899***********8 PP

  == domain 2    score: 46.2 bits;  conditional E-value: 7.8e-16
                 TS-HHHHHHHHHHH....TST--CCCHHHHHTS-HHHHHHHHHHHHHHHHH CS
  PF04545.11   4 sLpererevlelrf....geglTleEiGerlgisrerVrqiekrAlrkLRk 50 
                  L+ re +vl+lr+    g +++l E+G+   +sr +Vr+ie+rAl+kLR+
  MMETSP1325-20131115|3544_1 221 ALTNREIKVLKLRYgfvgGIPKSLDEVGAAVSVSRDTVRRIEARALNKLRE 271
                 69****************9999****************************7 PP

>> PF13560.1  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.37   8.5e+02      17      32 ..     151     166 ..     142     194 .. 0.80
   2 ?   11.7   0.0   9.1e-05      0.21      16      36 ..     243     263 ..     241     271 .. 0.91

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.37
   PF13560.1  17 qeevAerlgvSastls 32 
                  +e+A+++ +S+ +l 
  MMETSP1325-20131115|3544_1 151 IDELAAASKISREKLQ 166
                 5788888888887765 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 9.1e-05
   PF13560.1  16 tqeevAerlgvSastlsrlEq 36 
                 +++ev++++ vS++t++r+E 
  MMETSP1325-20131115|3544_1 243 SLDEVGAAVSVSRDTVRRIEA 263
                 789*****************7 PP

>> PF13384.1  Homeodomain-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011      0.25      18      40 ..     242     264 ..     226     271 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00011
   PF13384.1  18 lsvreiAraLgvsrrTvyrwlkr 40 
                 +s  e+ +a  vsr Tv+r+  r
  MMETSP1325-20131115|3544_1 242 KSLDEVGAAVSVSRDTVRRIEAR 264
                 78899**************9555 PP

>> PF13413.1  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       4.6     1e+04      47      58 ..     113     124 ..     112     127 .. 0.74
   2 ?    2.5   0.0     0.044     1e+02      10      28 ..     148     166 ..     145     167 .. 0.87
   3 ?    7.0   0.0    0.0018         4      12      41 ..     243     272 ..     242     281 .. 0.92

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 4.6
                 HHHHHHHHTT-- CS
   PF13413.1  47 ylrnYArlLgld 58 
                 ++ n Ar+++l+
  MMETSP1325-20131115|3544_1 113 FVHNNARMIRLP 124
                 778888888876 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.044
                 T--HHHHHHHSS--HHHHH CS
   PF13413.1  10 glsledvadktkiskryLe 28 
                 + s++++a+  kis + L+
  MMETSP1325-20131115|3544_1 148 EPSIDELAAASKISREKLQ 166
                 569***********99987 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.0018
                 -HHHHHHHSS--HHHHHHHH---------H CS
   PF13413.1  12 sledvadktkiskryLealEegdfdalpep 41 
                 sl++v +   +s ++++++E+  +++l ep
  MMETSP1325-20131115|3544_1 243 SLDEVGAAVSVSRDTVRRIEARALNKLREP 272
                 89***********************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1407.86
//
Query:       MMETSP1325-20131115|3547_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00052   19.5   0.0    0.00062   19.3   0.0    1.1  1  PF02622.10 Uncharacterized ACR, COG1678


Domain annotation for each model (and alignments):
>> PF02622.10  Uncharacterized ACR, COG1678
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   4.5e-08   0.00062      95     160 ..       8      77 ..       2      78 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 4.5e-08
  PF02622.10  95 ldilealiasg.egpeklllflGYagWgagQLesEieegsWlvvpadselifdt...ppeelWeealrrl 160
                 ld+ ++ +++g  +  +++lflG  +W++g L++Ei++g+   v++ + l +++    p+ lW+e+ + +
  MMETSP1325-20131115|3547_1   8 LDAAAKAVRDGeLNVLDFRLFLGKRTWAPGTLNAEIAAGTYQPVACARPLALKQclqLPKPLWHEVCELA 77 
                 6777777899978899*****************************9999888873323455888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|3546_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1097.53
//
Query:       MMETSP1325-20131115|3550_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 229.85
//
Query:       MMETSP1325-20131115|3551_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-09   35.7   0.0    1.2e-08   35.0   0.0    1.5  1  PF01909.18 Nucleotidyltransferase domain
  ------ inclusion threshold ------
      0.012   15.3   0.0      0.021   14.5   0.0    1.4  1  PF12872.2  OST-HTH/LOTUS domain
      0.066   13.3   0.0        0.1   12.7   0.0    1.3  1  PF03465.10 eRF1 domain 3


Domain annotation for each model (and alignments):
>> PF01909.18  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   2.6e-12   1.2e-08       1      66 [.      37      99 ..      37     129 .. 0.82

  Alignments for each domain:
  == domain 1    score: 35.0 bits;  conditional E-value: 2.6e-12
                HHHHHHHHHCT-TTSEEEEE-ETTTT---TT-EEEEEEEESTTSHHHHSHCHHHHHCCCHECCEEE CS
  PF01909.18  1 lskllerlkelygvakvvlfGSyarGtllpgSDiDllvvlpkpldriveeleelaeilkeleellg 66
                l++l+e+lke +++ +v  +GS+a+  +lp+SD+D++vv +k ++   ++ + +ae+ ++le++  
  MMETSP1325-20131115|3551_1 37 LERLHEDLKEVFPNLEVTEYGSTATQMALPDSDLDCVVVPDKTSE---TIITTKAEMVSVLEKIVA 99
                589************************************999988...555566666665555443 PP

>> PF12872.2  OST-HTH/LOTUS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   4.5e-06     0.021       1      47 [.      13      58 ..      13      69 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 4.5e-06
                S--SSHHHHHHHHHHHHTT-----BTTT---HHHHH-TT--TTT--- CS
   PF12872.2  1 kslkklkellrellesssdddGwvslsslgslyrkkypdfdprnYGy 47
                k+l++l++ + +lle+++++    +l++l +++++ +p + + +YG 
  MMETSP1325-20131115|3551_1 13 KDLDTLVQHIDDLLEAAKPARE-KNLERLHEDLKEVFPNLEVTEYGS 58
                57999*********99999744.7**********************6 PP

>> PF03465.10  eRF1 domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.3e-05       0.1       9     105 ..      38     129 ..      31     133 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHT...TCSSEE---HHHHHHHHTT-EEEEEEEHHHHTSSSHHHHHS.---.HHHHHH.HHHHHHHHH..HTT-EEEEE-TTSTTHHHH.HHG--- CS
  PF03465.10   9 eefleelak...dtgkavYGveevlkalemgAvetLLvseelersrdtlkekvketgeelelvelieelvenve..esgakveiisseseeGeqlvkafgGi 105
                 e++ e l++   + +   YG + ++ al  + ++ ++v ++  ++  t+k         +e+v+++e++v   e  +   ++++is+ s    ++  +fgG+
  MMETSP1325-20131115|3551_1  38 ERLHEDLKEvfpNLEVTEYGSTATQMALPDSDLDCVVVPDKTSETIITTK---------AEMVSVLEKIVARLEtkDWVSDLVFISTASMPVIKF-VGFGGV 129
                 444444444433666778***********************999965554.........468889999998765116679***************.9***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       670  (0.0490053); expected 273.4 (0.02)
Passed bias filter:                      619  (0.045275); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 690.15
//
Query:       MMETSP1325-20131115|3549_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 1416.98
//
Query:       MMETSP1325-20131115|3554_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-07   30.7   0.1    1.8e-07   30.6   0.0    1.1  1  PF00013.24 KH domain
    2.2e-07   30.3   0.1    2.6e-07   30.0   0.1    1.1  1  PF13014.1  KH domain


Domain annotation for each model (and alignments):
>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   2.6e-11   1.8e-07      16      58 .]       2      51 ..       1      51 [. 0.86

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 2.6e-11
                --TTHHHHHHHHHHT-EEEE--S........E.EEEEEESHHHHHHHHHHH CS
  PF00013.24 16 GkgGsnIkeIeeetgakIdvpkd........rdtvtisGdpesvekAkkli 58
                G gG +++eI+  +gak+ ++++        r tvti+G++ + ++A +li
  MMETSP1325-20131115|3554_1  2 GSGGTKVREIRTLSGAKVFIEPKhvnphkptR-TVTITGTTPAHKRAHELI 51
                99******************877898887666.******888777777765 PP

>> PF13014.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   3.9e-11   2.6e-07       7      43 .]       2      39 ..       1      39 [. 0.98

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 3.9e-11
   PF13014.1  7 GkgGetIkeIreetGakIrfpk.easpgsnereitIrG 43
                G gG  ++eIr  +Gak+ +++ + +p    r++tI+G
  MMETSP1325-20131115|3554_1  2 GSGGTKVREIRTLSGAKVFIEPkHVNPHKPTRTVTITG 39
                99***********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|3555_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.61
# Mc/sec: 565.70
//
Query:       MMETSP1325-20131115|3556_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.2e-38  128.5   1.1    1.1e-37  128.1   0.7    1.2  1  PF03382.9 Mycoplasma protein of unknown function, DUF285
  ------ inclusion threshold ------
       0.37   10.2   2.3        3.4    7.2   0.2    2.7  3  PF13018.1 Extended Signal Peptide of Type V secretion system


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.1   0.7   1.6e-41   1.1e-37      13     115 ..      73     176 ..      49     180 .. 0.93

  Alignments for each domain:
  == domain 1    score: 128.1 bits;  conditional E-value: 1.6e-41
   PF03382.9  13 fn.qdiskwdtsnvtdmssmFsgakkfnqdiskWdtsnVtnmsemFsgatsfnqdiskwntsnVtnmssmFkgatsfnqdissWnvskvtdmssmfenakafnq 115
                  +  +is+w ts+v+dms++F++ + fn+d+skW++s+Vt+m+++F+++t+fn d+skwn+s+V nm  mF+g+++fn d+s+W+vs+v     mf +++a+++
  MMETSP1325-20131115|3556_1  73 AKyGHISNWGTSKVKDMSRLFKDRRYFNEDLSKWNVSSVTTMKSIFERCTAFNGDLSKWNVSSVINMADMFHGCKAFNGDLSKWDVSSVMRWGGMFGGCTALSD 176
                 345789*********************************************************************************************99876 PP

>> PF13018.1  Extended Signal Peptide of Type V secretion system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.2    0.0005       3.4       9      23 ..      99     113 ..      99     113 .. 0.90
   2 ?    1.7   0.0     0.026   1.8e+02       9      20 ..     124     135 ..     124     138 .. 0.83
   3 ?   -1.7   0.0      0.31   2.1e+03       9      18 ..     149     158 ..     149     161 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0005
   PF13018.1   9 wneatgtwvvvsEla 23 
                 +ne++++w+v s ++
  MMETSP1325-20131115|3556_1  99 FNEDLSKWNVSSVTT 113
                 9*********98775 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.026
   PF13018.1   9 wneatgtwvvvs 20 
                 +n ++++w+v s
  MMETSP1325-20131115|3556_1 124 FNGDLSKWNVSS 135
                 78899****976 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 0.31
   PF13018.1   9 wneatgtwvv 18 
                 +n ++++w v
  MMETSP1325-20131115|3556_1 149 FNGDLSKWDV 158
                 788999**98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 802.99
//
Query:       MMETSP1325-20131115|3560_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 528.18
//
Query:       MMETSP1325-20131115|3552_1  [L=536]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-31  107.8   0.0    1.2e-16   60.9   0.0    2.4  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
    1.1e-05   26.0   0.1    9.1e-05   23.1   0.0    2.5  2  PF13207.1  AAA domain
    1.1e-05   25.3   0.0    2.9e-05   24.0   0.0    1.6  1  PF13401.1  AAA domain
    2.5e-05   24.6   0.3    8.1e-05   22.9   0.2    2.0  1  PF13191.1  AAA ATPase domain
    3.5e-05   23.5   0.0    0.00014   21.6   0.0    2.1  2  PF13671.1  AAA domain
    0.00018   21.7   0.0    0.00035   20.7   0.0    1.5  1  PF13238.1  AAA domain
    0.00018   21.1   0.1      0.001   18.6   0.0    2.2  2  PF07728.9  AAA domain (dynein-related subfamily)
    0.00045   20.0   0.0     0.0022   17.8   0.0    1.9  1  PF07724.9  AAA domain (Cdc48 subfamily)
    0.00048   20.0   0.0     0.0019   18.0   0.0    1.9  2  PF01926.18 50S ribosome-binding GTPase
     0.0013   18.2   0.6     0.0047   16.5   0.0    2.1  2  PF13245.1  Part of AAA domain
     0.0014   18.4   0.0     0.0039   17.0   0.0    1.7  1  PF13521.1  AAA domain
      0.002   16.7   0.0     0.0029   16.2   0.0    1.1  1  PF06068.8  TIP49 C-terminus
     0.0021   17.0   0.0     0.0037   16.2   0.0    1.3  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
     0.0021   18.1   0.0      0.012   15.6   0.0    2.2  2  PF00910.17 RNA helicase
     0.0032   16.9   0.0      0.018   14.5   0.0    2.0  2  PF05729.7  NACHT domain
     0.0039   16.4   0.0       0.16   11.2   0.0    2.3  2  PF13481.1  AAA domain
     0.0051   15.8   0.1     0.0087   15.1   0.1    1.3  1  PF01078.16 Magnesium chelatase, subunit ChlI
     0.0063   16.0   0.0      0.014   14.8   0.0    1.6  1  PF01443.13 Viral (Superfamily 1) RNA helicase
     0.0095   14.6   0.0      0.014   14.0   0.0    1.2  1  PF03215.10 Rad17 cell cycle checkpoint protein
  ------ inclusion threshold ------
      0.014   14.3   0.0      0.025   13.5   0.0    1.3  1  PF06414.7  Zeta toxin
      0.033   13.4   0.0      0.058   12.6   0.0    1.3  1  PF01695.12 IstB-like ATP binding protein
      0.035   12.8   0.0      0.053   12.2   0.0    1.2  1  PF00931.17 NB-ARC domain
      0.068   12.6   0.0       0.12   11.7   0.0    1.3  1  PF13479.1  AAA domain
       0.11   12.3   0.0       0.33   10.6   0.0    1.8  2  PF01202.17 Shikimate kinase
       0.14   11.6   0.0        0.3   10.5   0.0    1.4  1  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
       0.15   11.8   0.0       0.44   10.3   0.0    1.7  2  PF13173.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0   3.1e-14   1.6e-11       1      51 [.     172     223 ..     172     227 .. 0.92
   2 !   60.9   0.0   2.3e-19   1.2e-16      49     131 ..     267     355 ..     252     356 .. 0.86

  Alignments for each domain:
  == domain 1    score: 44.3 bits;  conditional E-value: 3.1e-14
                 EEEE-------HHHHHHHHHHCT.HEEEEEECCSSSSST-HHHHHHHHHHHH CS
  PF00004.24   1 vllyGppGtGKTllakavakelg.vefleisgsellskyvgesekkirelfk 51 
                 +ll+GppG+GKT+la+a+ ++l+ ++   isg+e+++ ++g sek+ir +++
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLSiRPPTLISGPEIMDRFIGSSEKNIRSIWE 223
                 69********************945569********************9987 PP

  == domain 2    score: 60.9 bits;  conditional E-value: 2.3e-19
                 HHHH.HHHTS-S.EEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24  49 lfke.akekakp.silfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++++ ak+ ak  +++++DE+da++++r   +++ s  +++vvnqLl+++dgvk    +v++i+ tnr d +d allr gR+++++ei+
  MMETSP1325-20131115|3552_1 267 FLEArAKADAKVlHVVVFDEFDAIGGERtssNTEGSMASNSVVNQLLAMIDGVKVVGPPVLIIALTNRRDLIDAALLRpGRLEVQLEIK 355
                 4433244444556***************9877778999**********************************************99985 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   1.7e-07   9.1e-05       3      25 ..     173     195 ..     172     289 .. 0.84
   2 ?   -1.0   0.0         5   2.6e+03      23      61 ..     429     476 ..     382     504 .. 0.48

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 1.7e-07
                 --B--TT---HHHHHHHHHHSTE CS
   PF13207.1   3 aitGppGsGKsTlakeLaerlgl 25 
                 +++GppG+GK+Tla++L++ l +
  MMETSP1325-20131115|3552_1 173 LLHGPPGCGKTTLARALSRSLSI 195
                 689***************99865 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 5
                 S......TEEEEEGGGB--GGGS-B-----B....--SSGGGB-HHHHH CS
   PF13207.1  23 l......glpvlslddllreeglkelddger....eskdadadllaail 61 
                 l      g++++ +dd   + g++e d++      +s+ +d +l ++ l
  MMETSP1325-20131115|3552_1 429 LnkgswdGVECVVTDD-DFDXGFEEHDRQQGgataNSNLYDSNLCDSNL 476
                 1333333455666666.34555555554442233344444444444444 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   5.6e-08   2.9e-05       7     100 ..     172     297 ..     169     330 .. 0.71

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 5.6e-08
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae...............karvvfveapastspkellqkllsalglpakg.....rltteellealqealrrrrt......rlliiDEaqrL......s 100
                 l+++G++G+GKTtl+r l r+l +++ +                 ++r ++ ++p+   p + l+++    g ++++     +++ +      +e l++r++       +++ DE++ +      s
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLSIRPPTLIsgpeimdrfigssekNIRSIWENPPPVPHPEDGLKEVDTGGGFDKESntqseEQRLHGGGLSQREFLEARAKadakvlHVVVFDEFDAIggertsS 297
                 789*******************88766655999999999999999999999999999999999999999999999996655522222222223333333333667788999999999986665541 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.2   1.5e-07   8.1e-05      25      47 ..     171     193 ..     161     329 .. 0.82

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 1.5e-07
   PF13191.1  25 lllvtGpsGiGKSsLlrelakpi 47 
                  ll++Gp+G+GK++L+r+l +++
  MMETSP1325-20131115|3552_1 171 GLLLHGPPGCGKTTLARALSRSL 193
                 79****************65554 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   2.8e-07   0.00014       3      45 ..     173     218 ..     172     279 .. 0.87
   2 ?   -1.7   0.0       4.1   2.2e+03       6      24 ..     383     401 ..     380     426 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 2.8e-07
   PF13671.1   3 llvGlpGsGKstlaerllkklg...yvrlsqdtlrkrlfgtdqqsk 45 
                 ll+G+pG+GK+tla++l + l     +++s +++++r  g+  +++
  MMETSP1325-20131115|3552_1 173 LLHGPPGCGKTTLARALSRSLSirpPTLISGPEIMDRFIGSSEKNI 218
                 89***************99998888999999999999888655554 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 4.1
   PF13671.1   6 GlpGsGKstlaerllkklg 24 
                 Gl++sG   ++++l+k ++
  MMETSP1325-20131115|3552_1 383 GLSASGQEAFLRKLAKSTD 401
                 99****9999999998765 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   6.6e-07   0.00035       2      23 ..     173     215 ..     172     277 .. 0.78

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 6.6e-07
   PF13238.1   2 litGtpGvGKtTlakeLaerl.....................g 23 
                 l+ G+pG+GKtTla++L++ l                      
  MMETSP1325-20131115|3552_1 173 LLHGPPGCGKTTLARALSRSLsirpptlisgpeimdrfigssE 215
                 589****************997777777776666655555544 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0     2e-06     0.001       2      29 ..     172     200 ..     171     209 .. 0.81
   2 ?   -0.9   0.0       2.1   1.1e+03     114     125 ..     325     336 ..     263     344 .. 0.54

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 2e-06
                 EEEE------HHHHHHHGGGGB.S--EEE CS
   PF07728.9   2 vlLvGppGtgKselaerlaeal.nrevey 29 
                 +lL GppG+gK++la+ l++ l  r+ + 
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLsIRPPTL 200
                 89*****************9986555555 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 2.1
                 .-EEEEE-SS-- CS
   PF07728.9 114 nfrviatanpld 125
                  + +ia++n++d
  MMETSP1325-20131115|3552_1 325 PVLIIALTNRRD 336
                 256666666666 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.2e-06    0.0022       6     108 ..     172     321 ..     167     325 .. 0.75

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 4.2e-06
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG---..----THHHHHHHHHTTT-HHHHT--..............................................-EEEETGGG----...------------HHHHHHHH---EE CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegG..............................................ivllDEidKihpk...essgadvSregVqrdLLqileggtl 108
                 +ll gp g+Gkt la+al++ l++   ++ + +   e++      +e+ + +   +pp  v + e+G                                              +v +DE d i  +   ++ +  + ++ V++ LL +++g ++
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLSI---RPPTLISGPEIMDrfIGSSEKNIRSIWENPPP-VPHPEDGlkevdtgggfdkesntqseeqrlhggglsqreflearakadakvlhVVVFDEFDAIGGErtsSNTEGSMASNSVVNQLLAMIDGVKV 321
                 6899*******************9...56666666666665534555555554444443.33444444666666688888888888888999999999999999********************999543444457789***********9776 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.7e-06    0.0019       4      89 ..     174     289 ..     172     332 .. 0.57
   2 ?   -1.8   0.0         5   2.6e+03      47      63 ..     403     419 ..     382     448 .. 0.69

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 3.7e-06
                 EE--TT---HHHHHHHHCSTCTE...............ETS-TT-SSSESEEEE........ETTE..EEEEE---SSSHHHHHHH........HHHHHHHHHHHCTSSE.EEE..EEE.TTS CS
  PF01926.18   4 ivGrpNvGKStLinaLtgekaak...............vsdypgtTrditenev........kkek..iilvDtPGiiegasedke........iegikkylekveradv.lll..vvd.asa 89 
                 + G p +GK+tL +aL+++  ++               ++      r+i    +        +  +  +  vDt G ++++s++++        +++++++le++ +ad+ +l+  v+d  +a
  MMETSP1325-20131115|3552_1 174 LHGPPGCGKTTLARALSRS-LSIrpptlisgpeimdrfIGSSEKNIRSI----WenpppvphP--EdgLKEVDTGGGFDKESNTQSeeqrlhggGLSQREFLEARAKADAkVLHvvVFDeFDA 289
                 77**************953.22223333333333333333333333333....1333344431..144579*****887777666655665555448888*****999997555115553333 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 5
                 EEEEE---SSSHHHHHH CS
  PF01926.18  47 iilvDtPGiiegasedk 63 
                 ++ +D++G+++ as++ 
  MMETSP1325-20131115|3552_1 403 FTGADLAGLVRAASSRA 419
                 56789999997666554 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   8.9e-06    0.0047      11      35 ..     171     193 ..     163     205 .. 0.78
   2 ?   -2.6   0.0         8   4.2e+03      48      63 ..     386     408 ..     381     425 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 8.9e-06
   PF13245.1  11 pllvvtGgPGtGKTttlaaiiaall 35 
                 + l++ G+PG GKT tla++ ++ l
  MMETSP1325-20131115|3552_1 171 G-LLLHGPPGCGKT-TLARALSRSL 193
                 4.566*********.9999888766 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 8
   PF13245.1  48 vaptgraakrlserl.......l 63 
                 ++++ ++++ l++++       l
  MMETSP1325-20131115|3552_1 386 ASGQEAFLRKLAKSTdgftgadL 408
                 67788888888888865554442 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   7.4e-06    0.0039       4      35 ..     174     211 ..     172     225 .. 0.75

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 7.4e-06
   PF13521.1   4 itGgpstGKTtlleaLaar...gypvv...pEvarevl 35 
                 + G+p++GKTtl++aL++      p++   pE++ +++
  MMETSP1325-20131115|3552_1 174 LHGPPGCGKTTLARALSRSlsiRPPTLisgPEIMDRFI 211
                 78**************9765553333224777777766 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   5.5e-06    0.0029      51      90 ..     170     208 ..     160     221 .. 0.83

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 5.5e-06
   PF06068.8  51 ravLlaGppgtGktalaiaiskelgedvpfvalsgsevys 90 
                 r++Ll Gppg Gkt la a+s++l+   p + +sg e+  
  MMETSP1325-20131115|3552_1 170 RGLLLHGPPGCGKTTLARALSRSLSIR-PPTLISGPEIMD 208
                 89**********************955.668888888865 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   7.1e-06    0.0037      53      85 ..     172     205 ..     166     210 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 7.1e-06
   PF05496.7  53 vllyGpPGlGkttlakiiakelgvel.kvtsgPv 85 
                 +ll+GpPG Gkttla+ +++ l ++     sgP 
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLSIRPpTLISGPE 205
                 79*****************999876414566765 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.3e-05     0.012       2      23 ..     173     194 ..     172     216 .. 0.87
   2 ?   -1.0   0.0       3.2   1.7e+03      52     106 ..     281     333 ..     279     334 .. 0.56

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 2.3e-05
  PF00910.17   2 wlyGpsgeGKStlakeLakall 23 
                 +l+Gp+g+GK+tla+ L+++l+
  MMETSP1325-20131115|3552_1 173 LLHGPPGCGKTTLARALSRSLS 194
                 79**************999886 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 3.2
  PF00910.17  52 vvvidDfgqvkdeenpsdlaelirlvsstpyplnmasleekgtlftSkvvivtsN 106
                 vvv+d+f ++  e +    ++   ++s+  ++   a ++  +++  ++++i+ +N
  MMETSP1325-20131115|3552_1 281 VVVFDEFDAIGGERT--SSNTEGSMASNSVVNQLLAMIDGVKVVGPPVLIIALTN 333
                 789999999886632..22333334444444444444444456777777777777 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.4e-05     0.018       3      24 ..     172     193 ..     170     198 .. 0.88
   2 ?   -0.6   0.0       1.4   7.6e+02      72     144 ..     267     350 ..     248     370 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.4e-05
   PF05729.7   3 vilqGeaGsGKTtLlqklasaw 24 
                 ++l+G++G+GKTtL++ l + +
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSL 193
                 789*************998765 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 1.4
   PF05729.7  72 vwivllelperlL..lilDglDelvsdlgq.....lkekqpvrtlLselirkkllpeasllltvrpdalrdleeqleea....i 144
                 ++  +++   ++L   ++D +D +            +  ++v + L  +i +  + + ++l+++ ++++  +   l ++     
  MMETSP1325-20131115|3552_1 267 FLEARAKADAKVLhvVVFDEFDAIGGERTSsntegSMASNSVVNQLLAMIDGVKVVGPPVLIIALTNRRDLIDAALLRPgrleV 350
                 555556666667677899999998876666777886677777777888888888888888888777777556555555544444 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00031      0.16      28      57 ..     165     193 ..     142     212 .. 0.78
   2 ?    2.8   0.0      0.11        58     128     174 ..     265     314 ..     248     327 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00031
   PF13481.1  28 gllprgsltllaGapgtGKStlalqlaaav 57 
                 g+ p  + +ll G+pg+GK+tla +l  ++
  MMETSP1325-20131115|3552_1 165 GMAPVRG-LLLHGPPGCGKTTLARALSRSL 193
                 5555444.89*************9988766 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.11
   PF13481.1 128 adlerllaaieelegpdlvviDtlsrlvggdensnsd..v..gaviaaler 174
                  ++ + +a +++ + +++vv+D ++++ g    sn++  +  ++v+++l +
  MMETSP1325-20131115|3552_1 265 REFLEARAKADA-KVLHVVVFDEFDAIGGERTSSNTEgsMasNSVVNQLLA 314
                 455444555555.559**********9999555555544446888888765 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   1.7e-05    0.0087      22      45 ..     169     192 ..     160     213 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.7e-05
  PF01078.16  22 gHnlllvGppGsGKtmlakrlpsl 45 
                    lll GppG+GKt la++l+  
  MMETSP1325-20131115|3552_1 169 VRGLLLHGPPGCGKTTLARALSRS 192
                 5679***************99764 PP

>> PF01443.13  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   2.7e-05     0.014       2      28 ..     173     199 ..     172     220 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 2.7e-05
  PF01443.13   2 vvhGvpGcGKStlirkllrtltvnrpt 28 
                 + hG pGcGK+tl r l r+l+  +pt
  MMETSP1325-20131115|3552_1 173 LLHGPPGCGKTTLARALSRSLSIRPPT 199
                 68***************9996666664 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   2.7e-05     0.014      47      72 ..     171     196 ..     162     223 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.7e-05
  PF03215.10  47 illltGPsGcgKsTtvkvlskelgik 72 
                  lll GP+GcgK+T  + ls+ l i+
  MMETSP1325-20131115|3552_1 171 GLLLHGPPGCGKTTLARALSRSLSIR 196
                 59******************999886 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.8e-05     0.025      19      57 ..     172     210 ..     168     231 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4.8e-05
   PF06414.7  19 vllgGqpGAGKtslaellleelaagnivridaDelrkyh 57 
                 +ll G+pG+GKt+la++l ++l+ + +  i++ e++ ++
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLSIRPPTLISGPEIMDRF 210
                 6899*****************988888888888877766 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00011     0.058      49      69 ..     171     191 ..     166     195 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00011
  PF01695.12  49 nlvllGpsGvGKthlAialgv 69 
                  l+l Gp+G GKt lA al  
  MMETSP1325-20131115|3552_1 171 GLLLHGPPGCGKTTLARALSR 191
                 689***************975 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0    0.0001     0.053      22      45 ..     172     195 ..     161     197 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.0001
                 EEEE-------HHHHHHHTS-SS- CS
  PF00931.17  22 vglvGmgGvGKttlakqvykdesv 45 
                 + l+G +G+GKttla++  ++ s+
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLSI 195
                 569*************99888765 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00024      0.12       7      29 ..     173     195 ..     170     197 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00024
   PF13479.1   7 liYGkpGiGKTslaktlpktlfl 29 
                 l+ G+pG GKT+la+ l++ l +
  MMETSP1325-20131115|3552_1 173 LLHGPPGCGKTTLARALSRSLSI 195
                 788*************9998877 PP

>> PF01202.17  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00064      0.33       1      18 [.     178     195 ..     178     197 .. 0.92
   2 ?   -2.4   0.0       6.4   3.4e+03      30      49 ..     375     394 ..     373     400 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00064
                 -----HHHHHHHHHHT-- CS
  PF01202.17   1 mGaGKstvGkllAkalgl 18 
                 +G+GK+t++++l+++l++
  MMETSP1325-20131115|3552_1 178 PGCGKTTLARALSRSLSI 195
                 7**************987 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 6.4
                 H----HHHHHHH---HHHHH CS
  PF01202.17  30 rtgmsiaeifeeegeeaFre 49 
                 r+g+ +++ + ++g+eaF +
  MMETSP1325-20131115|3552_1 375 RWGRMVSQGLSASGQEAFLR 394
                 789999999*******9987 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00057       0.3      18      42 ..     172     196 ..     163     204 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00057
  PF02367.12  18 vlLsGdlGaGKTtlvkglakglgvk 42 
                 +lL+G+ G GKTtl+++l + l+++
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSLSIR 196
                 68*****************999876 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00083      0.44       5      26 ..     172     193 ..     170     206 .. 0.85
   2 ?   -2.8   0.0       9.3   4.9e+03      51      72 ..     264     289 ..     244     298 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00083
   PF13173.1   5 lvitGpRrvGKttllkqlakel 26 
                 l++ Gp ++GKttl++ l ++l
  MMETSP1325-20131115|3552_1 172 LLLHGPPGCGKTTLARALSRSL 193
                 6899***********9987655 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 9.3
   PF13173.1  51 lelflek.lke...kkkylflDEiqe 72 
                 +++fle  +k      +++++DE+  
  MMETSP1325-20131115|3552_1 264 QREFLEArAKAdakVLHVVVFDEFDA 289
                 35555553222322223488888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 1.02u 0.32s 00:00:01.34 Elapsed: 00:00:00.54
# Mc/sec: 2378.61
//
Query:       MMETSP1325-20131115|3563_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.074   12.6   0.4      0.074   12.6   0.2    2.0  2  PF06677.7  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
       0.23   11.7   2.5       0.51   10.6   1.8    1.6  1  PF12674.2  Putative zinc ribbon domain
        5.7    6.4   7.5       0.33   10.4   0.5    2.2  2  PF01667.12 Ribosomal protein S27


Domain annotation for each model (and alignments):
>> PF06677.7  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   1.6e-05     0.074      19      33 ..      62      76 ..      60      84 .. 0.86
   2 ?   -4.2   2.5         3   1.4e+04      20      23 ..      88      91 ..      86      95 .. 0.56

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.6e-05
   PF06677.7 19 hCpkCgtpLfrlkdg 33
                +C +Cg+pL+ +k +
  MMETSP1325-20131115|3563_1 62 TCASCGVPLMHPKGK 76
                8*********98865 PP

  == domain 2    score: -4.2 bits;  conditional E-value: 3
   PF06677.7 20 CpkC 23
                Cp C
  MMETSP1325-20131115|3563_1 88 CPDC 91
                5555 PP

>> PF12674.2  Putative zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.8   0.00011      0.51       2      22 ..      62      82 ..      61     113 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00011
   PF12674.2  2 fCqsCGmpleeeellgteadg 22
                +C sCG+pl++++   ++++ 
  MMETSP1325-20131115|3563_1 62 TCASCGVPLMHPKGKTKNEAE 82
                7************44444333 PP

>> PF01667.12  Ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.5   7.2e-05      0.33      28      51 ..      62      84 ..      57      87 .. 0.81
   2 ?   -0.8   0.7      0.22   9.8e+02      10      13 ..      91      94 ..      84      99 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 7.2e-05
                E-S----EEE--------B-SEEE CS
  PF01667.12 28 kCisCgkvLvePtGGkaklkaqil 51
                +C sCg +L  P+G k k  a++ 
  MMETSP1325-20131115|3563_1 62 TCASCGVPLMHPKG-KTKNEAECV 84
                8***********97.677677775 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.22
                -TTT CS
  PF01667.12 10 CpdC 13
                CpdC
  MMETSP1325-20131115|3563_1 91 CPDC 94
                5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       688  (0.0503218); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 699.35
//
Query:       MMETSP1325-20131115|3564_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|3559_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-09   36.1   0.1      5e-09   35.6   0.0    1.2  1  PF03134.14 TB2/DP1, HVA22 family
    9.1e-09   34.9   0.0    1.3e-08   34.4   0.0    1.2  1  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF03134.14  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   7.2e-13     5e-09      21      90 ..       2      71 ..       1      75 [. 0.92

  Alignments for each domain:
  == domain 1    score: 35.6 bits;  conditional E-value: 7.2e-13
  PF03134.14 21 slkaleskdkeddkqwltYWivyslltvvesl.adillswiPlYyelKllflvwlvlpktkGaeviykkvi 90
                s+kale+ + ++++ +l+YW+++  l ++e++ +  +l+ iP+Y +l+++ l  l +p+t  a  +++k++
  MMETSP1325-20131115|3559_1  2 SIKALEEGS-NSVTVYLMYWVILNSLIIIEQTpLGLILKSIPFYGLLRVVGLWVLGVPTTGVAMNLFEKMT 71
                889999875.6899******************9***************************99999999886 PP

>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   1.8e-12   1.3e-08       1      85 []      93     183 ..      93     183 .. 0.92

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 1.8e-12
                 EEEEEEEESS--S-STSSSS-EEEEEEEECTTEEE.........EEE--BSS-SSEEEEEEEEEEESCGGGTE.EEEEEEECHSSSC.SEE---EE CS
  PF00168.25   1 LkvkvieAknLpnkdkngtsdpyvkvslggakskk.........krTrvikntlnPvWnekftfevvaeelae.leleVkdedrfgk.ddflGeak 85 
                 L+vkvi+A   p+      +d+++++++ +    k         ++Trv k    PvWne + +  + ++l+  l ++V  ++++g+ +d lGe+k
  MMETSP1325-20131115|3559_1  93 LTVKVISAGPFPA---DTPPDAFATLTVVPRGG-KanegveglqFKTRVCKGAVQPVWNEVILMR-PLASLDAdLAVSVLGHKQIGHsNDKLGECK 183
                 89***********...789***********655.3478999************************.99999999************99*****985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 1054.40
//
Query:       MMETSP1325-20131115|3446_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 448.01
//
Query:       MMETSP1325-20131115|3565_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   13.4   0.0      0.063   13.0   0.0    1.2  1  PF10241.4 Uncharacterized conserved protein
      0.088   12.2   0.2       0.11   12.0   0.1    1.1  1  PF12882.2 NUT protein C terminal


Domain annotation for each model (and alignments):
>> PF10241.4  Uncharacterized conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   9.2e-06     0.063      11      40 ..      38      67 ..      34      85 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 9.2e-06
   PF10241.4 11 edldaliakQkqilgrLekknreLlelnal 40
                +d++ ++ +Q+qi+g++  +++ + eln++
  MMETSP1325-20131115|3565_1 38 SDVEGVLGTQHQISGQMSTQEESVDELNDI 67
                699***********************9985 PP

>> PF12882.2  NUT protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.6e-05      0.11      44     115 ..      17      84 ..       8      89 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.6e-05
   PF12882.2  44 eseekeeeglakqsqEeeelpsda.ellsyidkLcsqklfvsk.VeavihPqflaelLSpekqidqlalqkele 115
                 +++e  ++g+a++   e++++sd+ ++l+ ++++  q   +++ V+       l+++LS + ++ +++  + +e
  MMETSP1325-20131115|3565_1  17 NPQEAADHGDADEGTVEDDTFSDVeGVLGTQHQISGQMSTQEEsVDE------LNDILSVQSNTTIGSERNYSE 84 
                 56777899999999999999999736***********9988642666......999999999888887766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 488.49
//
Query:       MMETSP1325-20131115|3566_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       644  (0.0471036); expected 273.4 (0.02)
Passed bias filter:                      508  (0.0371562); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|3568_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-08   32.4   1.8    5.2e-08   32.2   1.2    1.0  1  PF00294.19 pfkB family carbohydrate kinase
  ------ inclusion threshold ------
       0.02   13.9   0.3      0.022   13.8   0.2    1.0  1  PF02110.10 Hydroxyethylthiazole kinase family
      0.083   12.5   0.5       0.11   12.0   0.3    1.2  1  PF02681.9  Divergent PAP2 family
      0.089   11.9   0.7      0.093   11.8   0.5    1.1  1  PF01256.12 Carbohydrate kinase


Domain annotation for each model (and alignments):
>> PF00294.19  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   1.2   1.5e-11   5.2e-08     221     295 ..       3      85 ..       1      90 [. 0.88

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 1.5e-11
                 EEEEB------EEEESS--EEE--..-SS--SB-TT---TTT--HHHHHHT.......T--HHHHHHHHHHHHHHHHT----G CS
  PF00294.19 221 tvvvtlGkdGallvekdgevhvppv.pkvkvvDttGAGDafvagflaglla.......gksleealrlanavaalvvqkagai 295
                  + vt G + a +v+++ge+   pv   v+ v+++GAGD+++++  a+l          + +  a +l+ a+a++ +++ g +
  MMETSP1325-20131115|3568_1   3 FLAVTDGPNPARVVSRGGESTSLPVpTGVNCVNPIGAGDTVAGVTCAALCLsggapmdHAAVVAAMSLGLAAASAKCECEGEG 85 
                 689************5555555555467**********************9****************************9975 PP

>> PF02110.10  Hydroxyethylthiazole kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.2   6.4e-06     0.022     170     240 ..      24      96 ..       4      99 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 6.4e-06
  PF02110.10 170 vlkiknGtellgkitasGCllgavvaaflavkkdkllaa.veavllykiAgekaaersegs.gsFqvelldal 240
                  l +  G + +  i a   + g ++aa +     ++++a v a ++ ++A+  a+ ++eg+ g+F+ e ++ l
  MMETSP1325-20131115|3568_1  24 SLPVPTGVNCVNPIGAGDTVAGVTCAALCLSGGAPMDHAaVVAAMSLGLAAASAKCECEGEgGTFELERMESL 96 
                 44566677777777666666677777777666788887779999999****9*******99999*99877766 PP

>> PF02681.9  Divergent PAP2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   3.3e-05      0.11      34      60 ..      48      74 ..      41      80 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.3e-05
   PF02681.9 34 lkvlletGGmPSsHsalvtalatavgl 60
                +++l+ +GG P  H+a+v+a++ +++ 
  MMETSP1325-20131115|3568_1 48 CAALCLSGGAPMDHAAVVAAMSLGLAA 74
                578999***************999886 PP

>> PF01256.12  Carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.5   2.7e-05     0.093     185     224 ..      37      78 ..      13      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.7e-05
                 ----------HHHHCCTTS..SHHHHHHHHHHHHHHHHHHHC CS
  PF01256.12 185 GGsGDvLaGligalLaqne..asyeaaiaaawlhgaasdeaa 224
                  G GD+ aG+  a L+ +   ++ +aa++aa+  g a++ a+
  MMETSP1325-20131115|3568_1  37 IGAGDTVAGVTCAALCLSGgaPMDHAAVVAAMSLGLAAASAK 78 
                 59***********99999887888889999988888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 526.16
//
Query:       MMETSP1325-20131115|3567_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-42  143.8   0.1    7.8e-42  143.4   0.1    1.0  1  PF03577.10 Peptidase family C69


Domain annotation for each model (and alignments):
>> PF03577.10  Peptidase family C69
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.4   0.1   5.7e-46   7.8e-42      77     248 ..       4     187 ..       2     190 .. 0.97

  Alignments for each domain:
  == domain 1    score: 143.4 bits;  conditional E-value: 5.7e-46
  PF03577.10  77 ileeagineanvamsatetittnervlgadPlv.....eggigeedlltlvLpyiksAregverlgklieeyGty.egngvafsDkdeiWylEtig......GhhwvAvrvPdDayavaaNqlridefdlndkenylaskdlkefieekhlnktkekefnfrkafgsaeekdreyntpRvwylq 248
                 ++ ea  ++++++++++  +t++e++ g    +     + +i++++l++++L+++k+Ar++++ +++l+++yG++ eg+++ ++D +e+W +E++g      G++wvA+r+Pd   + +aNq+ri +f l+d+e++l++kd+++f+++ + ++ ++++f+f +++ + +++ +++++ Rvw+ +
  MMETSP1325-20131115|3567_1   4 EIPEAEETYNVIGNMNEYALTIGETTAGGLEELqgtqsKAIIDYGSLIYITLQRSKTARDAIKTIADLMDNYGYAsEGESFSIADPNEVWVMEIMGkgeyelGAVWVARRIPDGYVSGHANQMRITTFPLDDPEDTLYAKDVISFARKIGAFDGADEDFSFSDVYDPVTFEGARFCEGRVWSFF 187
                 57899999*******************9988888999999**********************************99*********************************************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 903.24
//
Query:       MMETSP1325-20131115|3569_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.073   12.9   2.1        1.8    8.4   0.4    2.4  2  PF01883.14 Domain of unknown function DUF59
       0.12   11.3   0.4       0.16   10.8   0.3    1.3  1  PF01545.16 Cation efflux family


Domain annotation for each model (and alignments):
>> PF01883.14  Domain of unknown function DUF59
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0    0.0073        50      49      65 ..      23      39 ..       5      42 .. 0.90
   2 ?    8.4   0.4   0.00027       1.8      38      72 .]      73     108 ..      66     108 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.0073
                T---HHHHHHHHHC.-- CS
  PF01883.14 49 qaepirkaaeaavlalp 65
                 ae+i ++++a+++al+
  MMETSP1325-20131115|3569_1 23 SAEAIEADVRAKLRALA 39
                5799**********985 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00027
                 EEE--SSTT-T.T---HHHHHHHHHC.---EEEEEE CS
  PF01883.14  38 fvielttpaca.qaepirkaaeaavlalpgvveVsv 72 
                 + +e++       a  ++ +a++a++al+ v+ ++v
  MMETSP1325-20131115|3569_1  73 VLVEVPEFLSVkEAKQLAMQARDAIEALEDVSRAEV 108
                 55566643333567889**************99997 PP

>> PF01545.16  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.3   2.4e-05      0.16     218     282 ..      52     114 ..      24     117 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.4e-05
  PF01545.16 218 dgvlsvhdlhvwkvgsskilveihievdpslsvseahevaeeiekalkerfpgiadvtiqlepvs 282
                 +++  vh++ v+++ +    ve+ +ev++ lsv+ea+++a ++++a+ ++ +++ ++ ++l  ++
  MMETSP1325-20131115|3569_1  52 KKITTVHKVTVHYLDM-QPCVEVLVEVPEFLSVKEAKQLAMQARDAIEAL-EDVSRAEVHLSLAT 114
                 57889***********.******************************776.89999999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       533  (0.0389848); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 630.88
//
Query:       MMETSP1325-20131115|3570_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 201.29
//
Query:       MMETSP1325-20131115|3571_1  [L=271]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-33  115.8   0.0    2.2e-33  115.3   0.0    1.2  1  PF12018.3 Domain of unknown function (DUF3508)
  ------ inclusion threshold ------
      0.072   12.3   0.0        6.9    5.9   0.0    2.1  2  PF06940.6 Domain of unknown function (DUF1287)


Domain annotation for each model (and alignments):
>> PF12018.3  Domain of unknown function (DUF3508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.3   0.0   3.3e-37   2.2e-33     189     280 ..      18     109 ..       5     110 .. 0.95

  Alignments for each domain:
  == domain 1    score: 115.3 bits;  conditional E-value: 3.3e-37
   PF12018.3 189 llpeatadfkklslqynGFCaytlvkrdGLLLPGnpslgvlkykdkyyaFssrdaayeFaedpdqyidavrekakkspeLiqLlrLqqqfks 280
                 l  e+t++f++l+l+y+GFC++t+v+r GLLLPG+p++gv++y++ +++F +  a + F+  p++y ++v  +a++speLi+LlrLq++f++
  MMETSP1325-20131115|3571_1  18 LSIESTPEFMQLPLEYQGFCPWTMVNRHGLLLPGKPAIGVVRYQNMFFVFAHATALNAFMRAPEEYKQGVLIIAQRSPELIHLLRLQNDFPN 109
                 66799************************************************************************************986 PP

>> PF06940.6  Domain of unknown function (DUF1287)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.001       6.9      82     148 ..      58     123 ..      47     133 .. 0.78
   2 ?    4.4   0.1     0.003        20      74     104 ..     179     209 ..     151     221 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.001
   PF06940.6  82 RRvpnlevffkrkgasltiekkaedyqpGDivtlklsgnlpHigivsdkkeaegvplviHnigagak 148
                  R +n+   f++  a  +  + +e+y+ G +++ + s +l H+  + +   ++++  +i n+g+g  
  MMETSP1325-20131115|3571_1  58 VRYQNMFFVFAHATALNAFMRAPEEYKQGVLIIAQRSPELIHLLRLQNDFPNQSISKLI-NAGKGGD 123
                 57888888888888888899999*******************98777777666655555.5555544 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.003
   PF06940.6  74 rpDkniDhRRvpnlevffkrkgasltiekka 104
                 ++  n  +RR ++ +v++ r++ ++t++++a
  MMETSP1325-20131115|3571_1 179 QQTDNSHFRRENDSQVYLPRQKDTQTMKTSA 209
                 4556889***************999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.33s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 1443.14
//
Query:       MMETSP1325-20131115|3575_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 193.39
//
Query:       MMETSP1325-20131115|3572_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-14   52.5   4.0    4.7e-14   51.7   2.7    1.4  1  PF05739.14 SNARE domain
     0.0017   17.8   3.0      0.002   17.5   2.1    1.1  1  PF00015.16 Methyl-accepting chemotaxis protein (MCP) signalling domain
     0.0091   15.8   0.3       0.01   15.6   0.2    1.1  1  PF09074.5  Mer2
  ------ inclusion threshold ------
      0.016   15.3   0.2       0.02   14.9   0.1    1.2  1  PF07432.8  Histone H1-like protein Hc1
      0.049   12.9   0.4      0.054   12.8   0.3    1.1  1  PF01988.14 VIT family
      0.067   12.2   6.9      0.086   11.8   4.8    1.0  1  PF06705.6  SF-assemblin/beta giardin
       0.18   11.8   2.1       0.25   11.4   0.6    1.7  2  PF10367.4  Vacuolar sorting protein 39 domain 2
       0.33   11.2   5.2       0.15   12.3   1.4    2.0  2  PF04102.7  SlyX
       0.39   10.8   2.9       0.31   11.1   0.8    1.7  2  PF10704.4  Protein of unknown function (DUF2508)
       0.45   10.2   5.6       0.57    9.9   3.9    1.0  1  PF09744.4  JNK_SAPK-associated protein-1
        1.4    8.3   6.7        1.8    8.0   4.6    1.1  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   2.7   3.8e-17   4.7e-14       1      63 []      50     112 ..      50     112 .. 0.99

  Alignments for each domain:
  == domain 1    score: 51.7 bits;  conditional E-value: 3.8e-17
                 HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF05739.14   1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalryqk 63 
                 er+e++ el++s + L++lf+dm+e v+eQ e +d+I+ nv  a  r+++a  +l  a+ +qk
  MMETSP1325-20131115|3572_1  50 ERQEQVVELNKSCRVLNDLFKDMAEIVHEQQEGIDQIEKNVTAAAARTKDAVVHLEEASDHQK 112
                 8**********************************************************9997 PP

>> PF00015.16  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   2.1   1.6e-06     0.002     124     192 ..      42     110 ..      22     114 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 1.6e-06
                 ----HHHHH---CCCCHHHHCCCHHHH---HHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH CS
  PF00015.16 124 eegselveetgealkeIveavaeiadlvqeiaaaseeqsasieevnqaveeidevtkenaalveeaaaa 192
                 ++ ++l++e +e++ e+ ++    +dl +++a  ++eq ++i+++ ++v+  +  tk+ +   eea++ 
  MMETSP1325-20131115|3572_1  42 QVDLQLARERQEQVVELNKSCRVLNDLFKDMAEIVHEQQEGIDQIEKNVTAAAARTKDAVVHLEEASDH 110
                 3445667777777778888888899****************************************9875 PP

>> PF09074.5  Mer2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.2   8.1e-06      0.01      21     113 ..      24     113 ..       5     117 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 8.1e-06
   PF09074.5  21 leeaDkqileWagkLeLEsidlkEksekLinvlnenskeLlkvveqlnekLesqe...askneeikklikklgaqlnnqlkevvkaleeklktink 113
                  ++ D+qi+    +  L s+d   +  +L    +e+  eL+k++  ln++++++    + ++e+i ++ k++ a   ++ k+ v  lee ++  +k
  MMETSP1325-20131115|3572_1  24 RQQEDDQIMA---R--LKSVDNGQVDLQLARERQEQVVELNKSCRVLNDLFKDMAeivHEQQEGIDQIEKNVTAA-AARTKDAVVHLEEASDHQKK 113
                 5667999998...4..8899999999999999999***************97666788**********9999887.56667778889998887765 PP

>> PF07432.8  Histone H1-like protein Hc1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.1   1.6e-05      0.02       2      52 ..      65     115 ..      64     118 .] 0.90

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.6e-05
   PF07432.8   2 lkdtakklrdllesiqkdlekaekGnkaaaqrvrtdsiklekvaklyrkes 52 
                 l d +k++ +++++ q+ +++ ek   aaa r +   + le  +   +k  
  MMETSP1325-20131115|3572_1  65 LNDLFKDMAEIVHEQQEGIDQIEKNVTAAAARTKDAVVHLEEASDHQKKSC 115
                 889**************************************9877666655 PP

>> PF01988.14  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   4.4e-05     0.054      48     116 ..      16      86 ..       7     114 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.4e-05
  PF01988.14  48 malGeylsvkaerdleeaeler.eqqeverspegeve.eladilkakglseetaaqvaeeltakedaldfl 116
                  + G+yl  + e d+  a+l++  + +v+ ++ +e++ +++++ k+  + +++ +++ae++ ++++++d +
  MMETSP1325-20131115|3572_1  16 QGGGGYLTRQQEDDQIMARLKSvDNGQVDLQLARERQeQVVELNKSCRVLNDLFKDMAEIVHEQQEGIDQI 86 
                 688*******************9999**********97888888888***********9998866544433 PP

>> PF06705.6  SF-assemblin/beta giardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   4.8   6.9e-05     0.086      57     146 ..      24     113 ..      22     117 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.9e-05
   PF06705.6  57 Raesdkqiqeefes.eikklqeriaeqvadlqaelkkavdslserlndleslireerekrrddieklakslvkkvnelvaaldeErierke 146
                 R++ d qi + ++s +  ++ ++ a + ++ + el+k+  +l++  +d+  +++e++e  +d+iek  + ++ +  + v  l+e   ++k+
  MMETSP1325-20131115|3572_1  24 RQQEDDQIMARLKSvDNGQVDLQLARERQEQVVELNKSCRVLNDLFKDMAEIVHEQQE-GIDQIEKNVTAAAARTKDAVVHLEEASDHQKK 113
                 888999999999873456799999*************************999998876.6899*********9999999999887777665 PP

>> PF10367.4  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.6    0.0002      0.25      41      83 ..      23      64 ..      21      80 .. 0.86
   2 ?    0.1   0.1      0.62   7.7e+02      48      53 ..      85      90 ..      56     117 .. 0.47

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0002
   PF10367.4 41 vekkresqvvknllkaeklqveeellkersrkvkiteekvCav 83
                ++++++ q+++ l  +++ qv  +l++er+++v ++ +k C+v
  MMETSP1325-20131115|3572_1 23 TRQQEDDQIMARLKSVDNGQVDLQLARERQEQV-VELNKSCRV 64
                689999***********************9987.678888887 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.62
   PF10367.4 48 qvvknl 53
                q+ kn+
  MMETSP1325-20131115|3572_1 85 QIEKNV 90
                222222 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.4      0.43   5.3e+02      25      51 ..      29      55 ..      22      61 .. 0.63
   2 ?   12.3   1.4   0.00012      0.15       3      55 ..      52     104 ..      50     113 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.43
   PF04102.7 25 evvaeqqkeidrlqrqlrllaerlkel 51
                +++++  k +d+ q  l+l +er +++
  MMETSP1325-20131115|3572_1 29 DQIMARLKSVDNGQVDLQLARERQEQV 55
                555555666666666666666666665 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.00012
   PF04102.7   3 eerieeLEiklafqedtieeLNevvaeqqkeidrlqrqlrllaerlkeleess 55 
                 +e++ eL       +d+  ++ e+v eqq+ id++++++ + a r k++    
  MMETSP1325-20131115|3572_1  52 QEQVVELNKSCRVLNDLFKDMAEIVHEQQEGIDQIEKNVTAAAARTKDAVVHL 104
                 688999999999999*****************************999987444 PP

>> PF10704.4  Protein of unknown function (DUF2508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.8   0.00025      0.31      10      52 ..      24      69 ..      19      72 .. 0.81
   2 ?   -1.5   0.0       2.1   2.6e+03      25      35 ..      80      90 ..      69     112 .. 0.55

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00025
   PF10704.4 10 kkeyDeeLleliekt...keeweeakkleensvdlseeliyqekla 52
                ++++D+++++ ++++   + +++ a++ +e++v+l++++ + + l+
  MMETSP1325-20131115|3572_1 24 RQQEDDQIMARLKSVdngQVDLQLARERQEQVVELNKSCRVLNDLF 69
                88999999876655422288******************99887765 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 2.1
   PF10704.4 25 keeweeakkle 35
                +e +++  k++
  MMETSP1325-20131115|3572_1 80 QEGIDQIEKNV 90
                44444433333 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.9   0.00046      0.57      43     131 ..      24     113 ..      21     116 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00046
   PF09744.4  43 senqelelelelleedkerLskqyerekelrkqaeeklle.lEdeleqekkelekkieeleeevrqlelkaknlsdkvsrLeeretelkk 131
                 +++++ ++ + l + d+ ++  q+ re++++ ++ +k  + l d +++++  ++++ e +++  ++    a   +d v+ Lee  +  kk
  MMETSP1325-20131115|3572_1  24 RQQEDDQIMARLKSVDNGQVDLQLARERQEQVVELNKSCRvLNDLFKDMAEIVHEQQEGIDQIEKNVTAAAARTKDAVVHLEEASDHQKK 113
                 455566778888889999999999999999988766655427888888888888888888888888888889999999999998877554 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   4.6    0.0014       1.8      98     182 ..      25     105 ..      23     114 .. 0.60

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0014
   PF04156.9  98 eqleerlaeleseledleedlellq...eelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqekla 182
                 +q++ ++ +  + +++ + dl+l++   e+  +l++++  l++ +k++a+ ++e++       e +++ ++ +++ ++++ ++  +l+
  MMETSP1325-20131115|3572_1  25 QQEDDQIMARLKSVDNGQVDLQLARerqEQVVELNKSCRVLNDLFKDMAEIVHEQQ-------EGIDQIEKNVTAAAARTKDAVVHLE 105
                 68889999999999999999999995555555555555555555555555555555.......4444444444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1180  (0.0863078); expected 273.4 (0.02)
Passed bias filter:                      772  (0.0564658); expected 273.4 (0.02)
Passed Vit filter:                        80  (0.00585138); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.47u 0.42s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 543.79
//
Query:       MMETSP1325-20131115|3576_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-05   22.2   0.2     0.0001   22.1   0.1    1.2  1  PF12697.2  Alpha/beta hydrolase family
    0.00062   19.4   0.0    0.00066   19.3   0.0    1.2  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.061   12.0   0.0      0.079   11.6   0.0    1.1  1  PF04288.8  MukE-like family
        0.1   12.6   0.0       0.17   11.9   0.0    1.3  1  PF00975.15 Thioesterase domain


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.1     3e-08    0.0001      63     107 ..       9      57 ..       3      92 .. 0.69

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 3e-08
                 --..--EEEE--------HHHHHH----.EEEEEEE------STT.....- CS
   PF12697.2  63 lgl.rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpas.....a 107
                  gl +p vlvG S G+ +a ++a+r  +  +++vli+p+ +  a       
  MMETSP1325-20131115|3576_1   9 EGLrGPTVLVGQSIGCGIAVEMARRGFG--DRMVLISPFTSISAMaaalfP 57 
                 44458******************99666..8********954333332220 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.9e-07   0.00066      58     105 ..      13      59 ..       4      93 .] 0.72

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 1.9e-07
   PF12695.2  58 eriilvGhSlGGgvalelagrddrvkglvllapfpdgedlakltlpvl 105
                 ++ +lvG+S+G g+a+e+a+r    + +vl++pf++ +++a+  +p+l
  MMETSP1325-20131115|3576_1  13 GPTVLVGQSIGCGIAVEMARR-GFGDRMVLISPFTSISAMAAALFPFL 59 
                 589**************9996.68889999999988776766655433 PP

>> PF04288.8  MukE-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.3e-05     0.079       7      45 ..      49      87 ..      44      91 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.3e-05
   PF04288.8  7 kaianplfpaldsllrsgrhissdeldnhaflmdfqeel 45
                 a+a  lfp l  +lr    + +d+ldn a + d++ +l
  MMETSP1325-20131115|3576_1 49 SAMAAALFPFLAPVLRVAPGLVLDKLDNLARVPDIRTDL 87
                699*****************************9999988 PP

>> PF00975.15  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.9e-05      0.17      65      86 ..      12      33 ..       5      33 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.9e-05
                S-SEEEE------HHHHHHHHH CS
  PF00975.15 65 egPyaLfGySlGGllAfevArq 86
                +gP +L+G S G+ +A e+Ar+
  MMETSP1325-20131115|3576_1 12 RGPTVLVGQSIGCGIAVEMARR 33
                79******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|3577_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-32  111.4   0.0    5.1e-32  111.1   0.0    1.1  1  PF00155.16 Aminotransferase class I and II
    1.6e-05   24.1   0.1    7.2e-05   21.9   0.1    1.8  2  PF01212.16 Beta-eliminating lyase
  ------ inclusion threshold ------
      0.017   14.0   0.0      0.029   13.3   0.0    1.3  1  PF01041.12 DegT/DnrJ/EryC1/StrS aminotransferase family
      0.028   13.1   0.1       0.05   12.3   0.1    1.3  1  PF00202.16 Aminotransferase class-III


Domain annotation for each model (and alignments):
>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   0.0   1.5e-35   5.1e-32     135     363 .]       5     245 ..       3     245 .. 0.88

  Alignments for each domain:
  == domain 1    score: 111.1 bits;  conditional E-value: 1.5e-35
                 HHHHHTT--SS-E..........EEE-SSS-S-------HHHHHHHHHHHHHTT-EEEEEES-------.-..HHHHH.HHHHHH-S-EEEEE--CCCCTBGGG----EEEE-HHHHHHHHHCCTTTS-----CCHHHHCTSHHHHHH......HHHHHHHHHHHHHHHHHHCC.CC-TCHHHH-.---EE-----HH......HHHCCH---BE--...........---EE-.----TTTHHHHHHHH CS
  PF00155.16 135 leealkeapegnk.......ktkvvlvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsl..davat.ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqs......eleemrqrlqkrrkelrdeLaelglkvlasq.sgmflltdlsaetakelskkLleevgvyvtpgtsftv...pgrlRitv.Aglteeeleelveal 363
                 le+ l+ea +  +        + +v+ve+++++ G +++l+ ++++   +kky+++l++Dea++++++g++  +   t +++v++++ ++ +g++ K+fG +G   Gyi++++ v+++lr+  ++  + ++++++v + + +a +++         ++  + l +++ ++r eL+++gl  ++   s ++++ ++++ +  ++s+++ ++ g++v+ +  + +    +r R++v Ag+t+++le +++ +
  MMETSP1325-20131115|3577_1   5 LEKVLREAISMGQprtrrpwNKIFVAVEGIYSMEGEICNLKAIVEV---CKKYKAYLYLDEAHSIGAMGKTgrGI--TeYCGVDTKDVDIMMGTFTKSFGGMG---GYIAADKSVIDYLRISCSGSMYHNAMSPIVCQQVITAFQIIMgtkcgnVGKQKLDALRDNSNYFRRELEKIGLHTYGDYdSPIIPVLLYNPTKILAFSRECYKR-GLAVVVVGFPATsvvLSRSRFCVsAGHTRADLEAAIKDI 245
                 56666666666666666777778***********************...********************775333..25************************...***************999999988888888888888877777799998999********************999888777************************.7777776677777798999***************99865 PP

>> PF01212.16  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.1   2.1e-08   7.2e-05     145     217 ..      42     117 ..      34     177 .. 0.88
   2 ?   -0.1   0.0      0.11   3.7e+02      70     143 ..     225     312 ..     208     315 .. 0.67

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 2.1e-08
                 HHHHHHHHHHHH---EEEEE-E-HHHHHHHHT--HHHHH....TT-SEEEE-S----------EEE--HHHHHHHHH CS
  PF01212.16 145 eelreiaeiakeygiplhlDgARlaeaakslgeiakeia....syaDsvtislkKdlganvGgilafrdkflaeave 217
                  +l++i e++k+y+  l lD A  + a+ ++g+ + e++    + +D+++  ++K++g  +Gg +a ++  +++ + 
  MMETSP1325-20131115|3577_1  42 CNLKAIVEVCKKYKAYLYLDEAHSIGAMGKTGRGITEYCgvdtKDVDIMMGTFTKSFGG-MGGYIAADKSVIDYLRI 117
                 59*************************************999999**********9998.*********98887654 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.11
                 EEEEETT-HHHHSS---HHHHH--EEEEE--TT.......................S---HHHHHCCSS-..STS..ECEEEEEES-TT------- CS
  PF01212.16  70 evvvtepshihfdetgaikelggvklrtlknkea......................gkldleklealikevgaheenialisltitnntaGGqvvs 143
                 + ++ + +h+  d + aik ++ + ++tlk + a                      gk + ++l++ + e  +     +    t++++ +GG++vs
  MMETSP1325-20131115|3577_1 225 SRFCVSAGHTRADLEAAIKDIAEI-AKTLKLRYAvsalaxaqlspparhgtssciyGKPTWAELATELSE--G----WRQTAATVATR-QGGRPVS 312
                 445555588888888888888766.666665555556777788888888888888888888888888888..4....23334455555.4777766 PP

>> PF01041.12  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   8.5e-06     0.029     122     154 ..      37      69 ..      34      82 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8.5e-06
  PF01041.12 122 lyGqpadmdairaiaaehglkvieDaAqAlGat 154
                 + G++++++ai +++++++ ++  D A+++Ga 
  MMETSP1325-20131115|3577_1  37 MEGEICNLKAIVEVCKKYKAYLYLDEAHSIGAM 69 
                 679****************************95 PP

>> PF00202.16  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   1.5e-05      0.05     200     312 ..      44     162 ..      32     175 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHCT-EEEEE-S--.-.-------SGGGG-----...SEE..EE-CTC------EEEEE-HHHHTTSHH--..-SST..T-HHHHHHHHHHHHHHHHTTHHHHHHH---TTTHH CS
  PF00202.16 200 laklreickkhnvllivDEvqt.G.fGrtGklfAaehagvep...Dlm..tlaKaltgGlplsavlataevmqafqpgshgttfg..gnplacavalavlevieeeellenaqekgerlkkg 312
                 l+++ e+ckk+ + l +DE  + G +G tG+   +e+ gv++   D+m  t+ K  +g      + a++ v + ++ +  g+++   + p+ c  ++ ++++i   +  +  ++k ++l+++
  MMETSP1325-20131115|3577_1  44 LKAIVEVCKKYKAYLYLDEAHSiGaMGKTGRGI-TEYCGVDTkdvDIMmgTFTKSFGG--MGGYIAADKSVIDYLRISCSGSMYHnaMSPIVCQQVITAFQIIMGTKCGNVGKQKLDALRDN 162
                 678889*************97544389****99.9******99899984446677654..34577899999999988889999852267888888888888887776665555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.95
# Mc/sec: 824.85
//
Query:       MMETSP1325-20131115|3578_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00029   19.8   0.1    0.00078   18.4   0.0    1.8  1  PF00036.27 EF hand
     0.0011   18.9   0.0     0.0028   17.6   0.0    1.6  1  PF13499.1  EF-hand domain pair
     0.0019   17.3   0.1      0.004   16.3   0.1    1.5  1  PF13202.1  EF hand
     0.0051   16.2   0.0     0.0095   15.4   0.0    1.5  1  PF13833.1  EF-hand domain pair
     0.0058   16.3   0.1      0.024   14.3   0.1    2.0  2  PF13405.1  EF-hand domain


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.9e-07   0.00078       7      25 ..     106     124 ..     102     128 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 2.9e-07
                 HHHCTTTSSEBEHHHHHHH CS
  PF00036.27   7 kefDkDgdGkIsfeEfkea 25 
                 + +D DgdGkIs  E++++
  MMETSP1325-20131115|3578_1 106 DALDEDGDGKISCAELMKL 124
                 789*************986 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0     1e-06    0.0028       7      41 ..     106     140 ..     106     144 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1e-06
   PF13499.1   7 kllDkdgdgyldkeeLlrllkhlgselsdeevrev 41 
                 ++lD dgdg+++ +eL++l  +   +++ ++++++
  MMETSP1325-20131115|3578_1 106 DALDEDGDGKISCAELMKLSSAYDRYRKKKNTERM 140
                 589****************9999988887777765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   1.5e-06     0.004       7      24 ..     107     124 ..     106     125 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.5e-06
                 HH--S----B-HHHHHHH CS
   PF13202.1   7 afDlNgDGkIsreELkrl 24 
                 a+D +gDGkIs  EL++l
  MMETSP1325-20131115|3578_1 107 ALDEDGDGKISCAELMKL 124
                 89************9987 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.5e-06    0.0095      32      50 ..     106     124 ..     103     128 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.5e-06
   PF13833.1  32 refDtdgdGkisfeEFcvl 50 
                 +++D dgdGkis++E ++l
  MMETSP1325-20131115|3578_1 106 DALDEDGDGKISCAELMKL 124
                 689************9987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.4   9.2e+03      13      22 ..      38      47 ..      35      49 .. 0.76
   2 !   14.3   0.1   8.9e-06     0.024       8      24 ..     107     123 ..     104     129 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 3.4
                ----B---HH CS
   PF13405.1 13 gdGkidaeEL 22
                +++ i+ +E+
  MMETSP1325-20131115|3578_1 38 RNNVIEGHEM 47
                7889999986 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 8.9e-06
                 CC-------B---HHHH CS
   PF13405.1   8 lfDkdgdGkidaeELrd 24 
                 ++D dgdGki+ +EL++
  MMETSP1325-20131115|3578_1 107 ALDEDGDGKISCAELMK 123
                 79*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 758.03
//
Query:       MMETSP1325-20131115|3581_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|3582_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.8    8.1   5.9         34    4.0   4.1    2.5  1  PF01469.13 Pentapeptide repeats (8 copies)


Domain annotation for each model (and alignments):
>> PF01469.13  Pentapeptide repeats (8 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   4.1    0.0025        34       4      35 ..      29      60 ..      27      64 .. 0.56

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.0025
  PF01469.13  4 GslNlGsgNtGsf.Nl..GsgNtGsfNlGsgNtGs 35
                Gs  +G + tGsf N+  Gs+N+G    Gs N+Gs
  MMETSP1325-20131115|3582_1 29 GSASSGDASTGSFsNAlrGSVNLGR---GSINFGS 60
                6777777777777333446666653...3333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|3584_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|3579_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|3586_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 592.04
//
Query:       MMETSP1325-20131115|3589_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.57
# Mc/sec: 570.17
//
Query:       MMETSP1325-20131115|3585_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.55
# Mc/sec: 1568.52
//
Query:       MMETSP1325-20131115|3580_1  [L=318]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.69
# Mc/sec: 1104.41
//
Query:       MMETSP1325-20131115|3590_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.9e-32  109.4   0.1    1.1e-31  109.2   0.1    1.0  1  PF04628.8 Sedlin, N-terminal conserved region
    1.3e-07   31.3   0.0    2.8e-07   30.2   0.0    1.7  1  PF04099.7 Sybindin-like family


Domain annotation for each model (and alignments):
>> PF04628.8  Sedlin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.2   0.1   1.6e-35   1.1e-31       5     121 ..      26     136 ..      22     137 .] 0.95

  Alignments for each domain:
  == domain 1    score: 109.2 bits;  conditional E-value: 1.6e-35
   PF04628.8   5 kdnplyelefssakeesekekellqfiahasLDiveerqwkatgelylgkvdkfeelavsafvtttklkflllhelsdskkkdedirqffqevhelyvktllNPFyeenepikspaF 121
                 + +ply le++s+  ++ ++++l+qfi+h++LD+v++++ + t++++l++vd+++e +vs f++++ +kf+llhe     ++++++r ff+e helyvk llNPFye ++p+ s+aF
  MMETSP1325-20131115|3590_1  26 SREPLYSLELNSQAADE-SQSHLNQFIVHSALDLVDKLAYS-TNNTNLRTVDRVYEQTVSCFLSPGCVKFMLLHE----GRSEDSVRGFFHEAHELYVKFLLNPFYEYDTPVVSSAF 136
                 458********999988.559********************.*********************************....***********************************999 PP

>> PF04099.7  Sybindin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   4.1e-11   2.8e-07      76     132 ..      81     136 ..      19     137 .] 0.88

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 4.1e-11
   PF04099.7  76 kLhclqtltGiKfvlitdtktnaeadsllrkiyelYsdyvlknPfyslempircelF 132
                 +++c+ ++  +Kf+l+++ +++++++ + +   elY+ + l nPfy+ ++p+ +  F
  MMETSP1325-20131115|3590_1  81 TVSCFLSPGCVKFMLLHEGRSEDSVRGFFHEAHELYVKFLL-NPFYEYDTPVVSSAF 136
                 689************************************87.9*********99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 683.96
//
Query:       MMETSP1325-20131115|3591_1  [L=583]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-18   65.9   1.2    7.1e-18   64.0   0.0    2.6  4  PF00027.24 Cyclic nucleotide-binding domain
  ------ inclusion threshold ------
      0.075   12.8   0.2        0.3   10.9   0.1    2.0  2  PF14034.1  Sporulation protein YtrH
      0.082   12.7   0.3        0.2   11.5   0.0    1.8  2  PF09771.4  Transmembrane protein 188
       0.09   12.3   0.2       0.23   11.0   0.1    1.7  1  PF00440.18 Bacterial regulatory proteins, tetR family


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       3.1   1.1e+04      28      45 ..      59      76 ..      57      78 .. 0.80
   2 ?   -1.5   0.0      0.57   1.9e+03      59      89 ..     199     229 ..     193     230 .. 0.73
   3 !   64.0   0.0   2.1e-21   7.1e-18       6      90 ..     307     392 ..     302     393 .. 0.97
   4 ?   -2.6   0.0       1.3   4.3e+03      31      75 ..     450     493 ..     442     499 .. 0.67

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 3.1
                EEEEEE-----EEEEEEE CS
  PF00027.24 28 vkvykndedgkesilael 45
                v+v++n+e+  e+i++ +
  MMETSP1325-20131115|3591_1 59 VNVIRNGEQNVEEIVGHI 76
                889999999999888766 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.57
                 SSB-SSEEEEEEEEEEEEEEHHHHHHHHCC- CS
  PF00027.24  59 geprsatvvaltdvevlvipredfrellekn 89 
                 g+ +s  + + t++ +l+  r+d+ +++++n
  MMETSP1325-20131115|3591_1 199 GSVASLLAATDTKTALLKQRRDDMSRFMKEN 229
                 5555555667888888888999999999887 PP

  == domain 3    score: 64.0 bits;  conditional E-value: 2.1e-21
                 ---EEE-TT-B--EEEEEEE-EEEEEEE-----EE.EEEEE-TTEECSGGGCCSSSB-SSEEEEEEEEEEEEEEHHHHHHHHCC-H CS
  PF00027.24   6 kgevifkeGdpadslyiilsGkvkvykndedgkes.ilaelgpGdffGelalltgeprsatvvaltdvevlvipredfrelleknp 90 
                 +ge++fkeGd+++ +y++ +G+v ++k +++ +++  + ++ pG+ffGe a+++++ r+a ++a+t +e++v+++ +++ lle++p
  MMETSP1325-20131115|3591_1 307 PGEILFKEGDEGTAMYFVNRGEVTIFKINPKTHVHvSITKIAPGGFFGEVAIVHHTVRAAGAKAKTFCELYVLESHKLDLLLENYP 392
                 8*********************************999***********************************************99 PP

  == domain 4    score: -2.6 bits;  conditional E-value: 1.3
                 EEE-----EEEEEEE-TTEECSGGGCCSSSB-SSEEEEEEEEEEE CS
  PF00027.24  31 ykndedgkesilaelgpGdffGelalltgeprsatvvaltdvevl 75 
                  + + ++  ++++e  + +++Gela  +g  ++a v+ ++ v+vl
  MMETSP1325-20131115|3591_1 450 KSGTTKSGAQTTGEGFKRGSVGELARALGI-SKAAVKGEGAVDVL 493
                 455555555677888888899999987776.66766666666665 PP

>> PF14034.1  Sporulation protein YtrH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   8.9e-05       0.3       5      38 ..     182     215 ..     178     220 .. 0.82
   2 ?   -1.5   0.0      0.63   2.1e+03      61      83 ..     559     581 ..     556     583 .] 0.81

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8.9e-05
   PF14034.1   5 vlsffialGvvlGgaligglgalltgepplktml 38 
                  +  ++ +Gvv+ +++ig++++ll+ +++ +++l
  MMETSP1325-20131115|3591_1 182 YMVVVMVFGVVMNACIIGSVASLLAATDTKTALL 215
                 5556778*****************9998877765 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.63
   PF14034.1  61 rslekgllegelkelvkqlllil 83 
                 r lekg ++g++ ++  +ll++ 
  MMETSP1325-20131115|3591_1 559 RALEKGXIQGQVAAMGMTLLCVA 581
                 68999999999999988888776 PP

>> PF09771.4  Transmembrane protein 188
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   5.9e-05       0.2       3      70 ..      56     126 ..      54     150 .. 0.84
   2 ?   -3.2   0.1         2   6.8e+03      55      76 ..     278     299 ..     271     306 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5.9e-05
   PF09771.4   3 psacedlkaferrltevisalqPttlr..Wrivlvvlsllvav.iaykyladpetsqvplidsltkhpeft 70 
                 ps+++ ++  e+ + e++  + P +++  +r++ + + l+ ++  +y +lad++t+ v+   +++   +f+
  MMETSP1325-20131115|3591_1  56 PSTVNVIRNGEQNVEEIVGHILPVAVQrvFRLIYAFFQLIHFLaCGYRWLADQKTYPVTYEWAMWANVDFA 126
                 6667777888999**********99864589999999999887258*************999999999986 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 2
   PF09771.4  55 sqvplidsltkhpeftlsllvl 76 
                 s+ pl+  l +h + +ls ++ 
  MMETSP1325-20131115|3591_1 278 SKCPLFRDLSSHFIVALSNILT 299
                 5667777788887777776654 PP

>> PF00440.18  Bacterial regulatory proteins, tetR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   6.6e-05      0.23      12      33 ..     463     484 ..     461     485 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.6e-05
                 S-GTT--HHHHHHHHTS-HHHH CS
  PF00440.18  12 kGyaattvreIAkeAGvskgal 33 
                 +G+ + +v e+A+++G+sk+a+
  MMETSP1325-20131115|3591_1 463 EGFKRGSVGELARALGISKAAV 484
                 69*****************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       631  (0.0461527); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.95u 0.37s 00:00:01.31 Elapsed: 00:00:00.52
# Mc/sec: 2686.68
//
Query:       MMETSP1325-20131115|3595_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0081   15.3   1.7     0.0081   15.3   1.2    1.1  1  PF08397.6 IRSp53/MIM homology domain
  ------ inclusion threshold ------
      0.016   14.3   2.0      0.018   14.1   1.4    1.0  1  PF12072.3 Domain of unknown function (DUF3552)
       0.02   13.5   1.4      0.023   13.3   1.0    1.0  1  PF07899.6 Frigida-like protein
      0.025   14.1   1.1      0.029   13.9   0.8    1.0  1  PF07926.7 TPR/MLP1/MLP2-like protein
      0.038   13.8   0.2      0.044   13.6   0.1    1.2  1  PF08359.6 YsiA-like protein, C-terminal region
      0.068   12.6   0.3      0.076   12.5   0.2    1.1  1  PF13874.1 Nucleoporin complex subunit 54
       0.11   11.6   2.1       0.11   11.6   1.4    1.1  1  PF03904.8 Domain of unknown function (DUF334)
       0.13   11.6   2.5       0.22   10.9   1.8    1.5  1  PF04423.9 Rad50 zinc hook motif


Domain annotation for each model (and alignments):
>> PF08397.6  IRSp53/MIM homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.2   4.8e-06    0.0081     100     133 ..      14      47 ..       3      57 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 4.8e-06
                 HHHHHHHHHHHHHH---HHHHHHHHHHHHHTTH- CS
   PF08397.6 100 lnaldkdyqkEykkkrdelekkqsdlkklrkKsq 133
                  ++l  +yq E ++++de+ekk+  + +l++K +
  MMETSP1325-20131115|3595_1  14 KDKLIEKYQLEIRQRNDEIEKKMYRVDRLNRKYE 47 
                 4567789*************************75 PP

>> PF12072.3  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.4   1.1e-05     0.018      94     135 ..       4      45 ..       2      51 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.1e-05
   PF12072.3  94 Ldrkeeslekkeekleekekelkqkeqsleekeeeveelvee 135
                 Ld++ ++l++k++ +e+ + e++q+++++e+k  +v++l ++
  MMETSP1325-20131115|3595_1   4 LDKQLTELKDKDKLIEKYQLEIRQRNDEIEKKMYRVDRLNRK 45 
                 89999**************************99999998765 PP

>> PF07899.6  Frigida-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.0   1.4e-05     0.023     241     281 ..       5      45 ..       4      53 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.4e-05
   PF07899.6 241 ekelaaLravikcieehkleseypledlekrieeLekakae 281
                 +k+l++L++  k+ie+++le+  + +++ek++ ++ +++++
  MMETSP1325-20131115|3595_1   5 DKQLTELKDKDKLIEKYQLEIRQRNDEIEKKMYRVDRLNRK 45 
                 79******************************998887654 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.8   1.7e-05     0.029       8      49 ..       7      48 ..       3      57 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.7e-05
   PF07926.7  8 lkeelkrlesqiaaieeqiqklkdDlenqaeiareaqdkYer 49
                  +elk +++ i++++ +i++  d++e++  ++    +kYe 
  MMETSP1325-20131115|3595_1  7 QLTELKDKDKLIEKYQLEIRQRNDEIEKKMYRVDRLNRKYEL 48
                5689999*********************************95 PP

>> PF08359.6  YsiA-like protein, C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   2.6e-05     0.044      31      65 ..       5      39 ..       3      56 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.6e-05
                HHHHHHH---HHHHHHHHCTTS-SSHHHHHHHHHH CS
   PF08359.6 31 ekhfsqlsadkelaivtqlelrqsnlelrlkinev 65
                +k +++l+++++l    qle+rq n e+ +k+  v
  MMETSP1325-20131115|3595_1  5 DKQLTELKDKDKLIEKYQLEIRQRNDEIEKKMYRV 39
                5778999**********************998765 PP

>> PF13874.1  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   4.5e-05     0.076      57      91 ..       5      39 ..       2      50 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.5e-05
   PF13874.1 57 neklkelqkhdletskrieeakqkhqelshrllkv 91
                 ++l+el+ +d  ++k + e++q++ e+++++++v
  MMETSP1325-20131115|3595_1  5 DKQLTELKDKDKLIEKYQLEIRQRNDEIEKKMYRV 39
                6789999999999999999***********99998 PP

>> PF03904.8  Domain of unknown function (DUF334)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.4   6.7e-05      0.11      43      75 ..       6      38 ..       3      53 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 6.7e-05
   PF03904.8 43 eelselkkqnklvvkylaeikeqqdlrekelke 75
                ++l+elk ++kl+ ky  ei++++d  ek++  
  MMETSP1325-20131115|3595_1  6 KQLTELKDKDKLIEKYQLEIRQRNDEIEKKMYR 38
                5799****************9998888887655 PP

>> PF04423.9  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.8   0.00013      0.22      30      54 .]       8      33 ..       5      33 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00013
                --HHHH.HHHHHHHHHHHHHHHHHHH CS
   PF04423.9 30 Ldeehe.qelikelkeelrrlpeelk 54
                L+e +   +li++++ e+r+ ++e++
  MMETSP1325-20131115|3595_1  8 LTELKDkDKLIEKYQLEIRQRNDEIE 33
                55555559***************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       981  (0.0717525); expected 273.4 (0.02)
Passed bias filter:                      703  (0.051419); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 243.84
//
Query:       MMETSP1325-20131115|3594_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.2   0.1      0.014   15.0   0.0    1.1  1  PF07209.7 Protein of unknown function (DUF1415)


Domain annotation for each model (and alignments):
>> PF07209.7  Protein of unknown function (DUF1415)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   9.9e-07     0.014      43     134 ..       3      92 ..       1     117 [. 0.81

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 9.9e-07
   PF07209.7  43 keeelleelleelelleeeee..eeieTtllvlpelledFldyldlldladalleelglegvlQlasfHPdyqFegteaddaenytNRsPyPil 134
                 ++ ell++++ ++e+le +e   ++ +T ++++p++  d +d +d +d+++a ++++ +e  l + +fH      g ++d    y  R+P+P+l
  MMETSP1325-20131115|3594_1   3 HMAELLSDFAPRFEKLEPSEGrlRQYKTAIFIFPDI--DIEDAHDTVDYVQAQVKRMFVERGLMIGEFHSANNATGLRNDK--FYPLRTPFPCL 92 
                 567888889999999976554126788*******97..89999****************************9999987775..5888*****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 625.72
//
Query:       MMETSP1325-20131115|3592_1  [L=447]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.4e-167  557.8   1.0   1.7e-167  557.5   0.7    1.1  1  PF01039.17 Carboxyl transferase domain
    2.1e-05   23.7   0.5    0.00017   20.8   0.0    2.1  2  PF06833.6  Malonate decarboxylase gamma subunit (MdcE)


Domain annotation for each model (and alignments):
>> PF01039.17  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  557.5   0.7  2.6e-171  1.7e-167      35     492 ..       2     444 ..       1     445 [. 0.98

  Alignments for each domain:
  == domain 1    score: 557.5 bits;  conditional E-value: 2.6e-171
                 HHHHH.C-.-TCEEEEE---------GCCCCTECCEESSTSSTCHHCCCCHHHHHHHHH--EEEEEEEE-----.TT---TTT-----HHHHHHHHHHHS-EEEEECSEE----THHHHHSSEEEEETT.--B-----HHHHHH-----STCCG---HCCCCT----SEEESSCCHHHHHHHHHHCTS-SSTTSTTS-----S-SS-SSS..CGHHHCS-BT.TB---HHHHHHHHS----EEEET----TTEEEEEEE----EE-EEEE-TTCC-----HHHHHHHHHHHHHHHHTT--EEEEEEE-------CCCHTTTTT---HHHHHHHH--S-EEEEEEEEE----CGGGTGCCGTT.CEEETTT-EE--------HHHHTHHHHHCCCHHHHCHHHHHHHHHHHHHHHHTTCHHHHHHHHHCCCSSHHHHHHHHHHCCCCGGGGHHHHHHHHHHH CS
  PF01039.17  35 telgl.kr.lprdgvvtgsGaviGravevvaqdftvlggslgpakgekllkaqelalkeglpligindsgGaegriqegvenlrgsGkifganskasgeipqislvtgrcaGggaYlpalgdriimveetspifltGpdvvkkvlgeevtseelgGadqhmaksGvahltaeddeealelirkllsylpkkasnnqedapivetldepdre.eelasivPddskkpyDvreviarivDeseFlEikegyAktvvtGfArlgGipvGvvAnetkveaGvlfidsalKaarfirlcdaenlPlviladvrGflvGqrqeyggilkhGaklvyalaeatvPkitvilrklyGGayvvmdskilgadavaawptariaVlgpegaveilfrkekaaaemerkelealkkkklaeyeeellnpyvaaargfaDavidpsetraklvialellwkksrkfyarkrrn 492
                 te+g+    +p+dgvvtg G ++Gr+v+v++qdftv+ggsl++++++k++k++++a++ g+p+ig+ndsgGa  riqeg+++l+g++++f +n++ sg++pqisl++g+caGg++Y+pa++d+++m++ ts++f+tGpdvvk+v++eevt+e lgGad+h++ sGvah  +e+d e l+ +r++++ylp    + q + p+v+t d  +r  ++l+ +vPdd++  yD+ +vi+++vD+++++Ei+++ Ak++vtGfAr++G++v v+An++ + aG+l+id+++Kaar +r+ +a+n+P+++++dv+Gfl+G++qe++gi++hGakl+ a+aeatvPk+tvi+rk+yGGay vm+sk+l+ d+++awp+a+iaV+g++gavei+fr  + ++             ++a+y e+++np+ aa+rgf+D++idp+etr +++  le l +k    ++rk+ n
  MMETSP1325-20131115|3592_1   2 TEFGMaDSvVPGDGVVTGQGLIHGRRVFVFSQDFTVMGGSLSETHAQKIMKVMKKATEVGAPVIGLNDSGGA--RIQEGIDALAGYADVFLQNVQSSGVVPQISLIMGPCAGGAVYSPAMTDFVFMTRRTSYMFVTGPDVVKTVTNEEVTQEALGGADTHTTLSGVAHRSFENDVETLRATRDFFDYLP---LSWQDEGPVVQTEDVRHRLePSLRHLVPDDANMGYDMTSVINKVVDRNSLFEIMPNTAKNIVTGFARMEGRTVAVIANNPLHLAGCLDIDASVKAARMVRFANAFNIPILTFVDVPGFLPGTDQEHDGIIRHGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDFNYAWPAAEIAVMGAKGAVEIIFRGGDVEK-------------ETANYTEKFANPMLAAQRGFVDDIIDPAETRVRICEDLETLRSKDLGEVRRKHSN 444
                 7899965589**************************************************************..*******************************************************************************************************************...66666*************9999*****************************************************************************************************************************************************************************996655.............4789*****************************************9888999987 PP

>> PF06833.6  Malonate decarboxylase gamma subunit (MdcE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1     0.033   2.3e+02      64     122 ..      61     115 ..      14     124 .. 0.66
   2 !   20.8   0.0   2.4e-08   0.00017      16     170 ..     246     400 ..     236     440 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.033
   PF06833.6  64 krpivvlvDvqsQalsrrdElLGinqalahlakal.alarlaG.hpvigllygkavsGafl 122
                  +p++ l D+ + +++      Gi +ala+ a+++ ++++ +G  p i+l++g  + Ga  
  MMETSP1325-20131115|3592_1  61 GAPVIGLNDSGGARIQE-----GI-DALAGYADVFlQNVQSSGvVPQISLIMGPCAGGAVY 115
                 44555555555443332.....33.467888877514566777347888888888888865 PP

  == domain 2    score: 20.8 bits;  conditional E-value: 2.4e-08
   PF06833.6  16 slkvldgeaeleevrfvavigdan...kaevgldealalakavleaieerekrpivvlvDvqsQalsrrdElLGinqalahlakalalarlaGhpvigllygkavsGaf...lahglqanrliaLpgaevkvmdlaamarvTkrsvekLealaasvpvfAp 170
                  +++++g a++ e+r+vavi++     ++ + +d +++ a+ v    +++ + pi+  vDv++   +  +E  Gi +  a l  a+a+a +   p ++++  ka  Ga+    +  l  +  +a p ae++vm+ + +  +  r  +  ++ a+ +  fA 
  MMETSP1325-20131115|3592_1 246 AKNIVTGFARM-EGRTVAVIANNPlhlAGCLDIDASVKAARMVRF--ANAFNIPILTFVDVPGFLPGTDQEHDGIIRHGAKLLFAYAEATV---PKVTVITRKAYGGAYdvmSSKHLRGDFNYAWPAAEIAVMGAKGAVEIIFRGGDVEKETANYTEKFAN 400
                 56789999999.********9877888888999999999998875..56899*************************99999999999875...99************85424567999999**************9999988888888888887777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.62
# Mc/sec: 1727.70
//
Query:       MMETSP1325-20131115|3598_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   14.4   0.0      0.027   14.2   0.0    1.1  1  PF12814.2 Meiotic cell cortex C-terminal pleckstrin homology


Domain annotation for each model (and alignments):
>> PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     2e-06     0.027      57     122 ..       9      68 ..       2      69 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2e-06
   PF12814.2  57 sekksksvkiesvlsvkdenplpkglekanfnksililtpkralkltaetrerhevWltaLsylle 122
                 ++++++++ +e+v+sv  ++++++g         i+++ ++r+  +  ++   ++ W+  L+ +++
  MMETSP1325-20131115|3598_1   9 EQTQKGQLFLEAVQSVSISQDKSDGD------ANIELNCEDRKWVFRPQNASSFQAWMDMLEKYTK 68 
                 556678899*******9888888888......78***************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 354.46
//
Query:       MMETSP1325-20131115|3593_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       678  (0.0495904); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.49
# Mc/sec: 1750.81
//
Query:       MMETSP1325-20131115|3600_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 524.20
//
Query:       MMETSP1325-20131115|3602_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 1109.42
//
Query:       MMETSP1325-20131115|3601_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-10   40.8   0.1    2.3e-10   39.8   0.0    1.4  2  PF05653.9 Magnesium transporter NIPA
  ------ inclusion threshold ------
      0.011   15.6   1.4      0.026   14.3   1.0    1.7  1  PF03729.8 Short repeat of unknown function (DUF308)


Domain annotation for each model (and alignments):
>> PF05653.9  Magnesium transporter NIPA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.21   1.4e+03     122     163 ..       4      45 ..       1      57 [. 0.72
   2 !   39.8   0.0   3.4e-14   2.3e-10     202     291 ..     102     193 ..      59     199 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.21
   PF05653.9 122 ihaPkeeeiesvkevadlltdpgflvyvilvvlvvlililav 163
                 +++ +e+   +v ++ +l    +f  y+++   + l+l++++
  MMETSP1325-20131115|3601_1   4 VYSSNENPHFDVVQLKELYGYKAFQGYATTLGCSLLVLHVTY 45 
                 567777777888888888888888888888777777777655 PP

  == domain 2    score: 39.8 bits;  conditional E-value: 3.4e-14
   PF05653.9 202 sGknqlkyalawilvvvvvicvvlqinyLnkaldifntsivtPvyyvlfttlvivasailfkefleqsv..ddvlgelcGfltillgvfllh 291
                  G + l ++ +++ +v+ + + ++ +  +nkal +f+   + Pv  v++t ++ + + i f+ef + ++  +dv g ++G+l+i++gv+ll 
  MMETSP1325-20131115|3601_1 102 PGGQPLSEWFTYFTLVLWLSTTAFWLYRMNKALALFDPLFIIPVLQVFWTFFATMNGGIYFREFFTEDFkhNDVPGFVTGILVIFVGVYLLS 193
                 38889***********************************************************877662268*****************97 PP

>> PF03729.8  Short repeat of unknown function (DUF308)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.0   3.9e-06     0.026      12      71 ..     134     192 ..     133     193 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.9e-06
   PF03729.8  12 lalllPgaallalvlliGilllvsGilqliaafarrkggggrwlglllGilsiiaGilll 71 
                 lal+ P++ + +l ++  +++ + G +++   f+++++ ++ + g++ Gil i +G++ll
  MMETSP1325-20131115|3601_1 134 LALFDPLFIIPVLQVFWTFFATMNGGIYFREFFTEDFK-HNDVPGFVTGILVIFVGVYLL 192
                 79999************************999997765.6******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.55
# Mc/sec: 989.04
//
Query:       MMETSP1325-20131115|3603_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-36  124.5   0.0      6e-36  123.8   0.0    1.3  1  PF00069.20 Protein kinase domain
    4.3e-11   42.2   0.0      8e-11   41.4   0.0    1.4  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.8   0.0   8.7e-40     6e-36     122     260 .]       1     139 [.       1     139 [. 0.94

  Alignments for each domain:
  == domain 1    score: 123.8 bits;  conditional E-value: 8.7e-40
                 S--SGGGEEEE...TT--EEE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 122 rDLKpeNiLld...kkgelkiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 rDLKpeN+Ll+   +++e+k+aDFG a  + + + e+l +++gt+ Y+APE++  +  y++kvD+Ws+Gvi++ ll g +pf  +   dq++l+e+i+++++e++e+ + + s+e+kdli +ll+ dp+kRl+a+e+l+h+w+
  MMETSP1325-20131115|3603_1   1 RDLKPENLLLKdedNDHEIKLADFGYAVRIdSPDFEDLIDQCGTPGYVAPEIIT-HMPYGTKVDMWSAGVIIFILLGGYPPFACA---DQNALYEMIKTGNYEFEEDYWGHVSAEAKDLIASLLTVDPNKRLSATEALQHEWI 139
                 9*********954445566*********9966666899****************.****************************99...9*****************************************************7 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   1.2e-14     8e-11     127     254 ..       1     132 [.       1     136 [. 0.82

  Alignments for each domain:
  == domain 1    score: 41.4 bits;  conditional E-value: 1.2e-14
                 ST-SGGGEEEET...TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---T...TSBHHHHHHHHHHT-SSGGGS--HHH CS
  PF07714.12 127 rdLaarNvLlee...ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpe...kcpeelyelmkqCweeepeeRptfke 254
                 rdL   N Ll++   ++ +k++DfG a +i ++ + ++  ++     ++apE+++++ + +k D+Ws Gv+++ ++  g  p++  +++ ++e++k+g+   + +   ++++e ++l+ + ++ +p++R + +e
  MMETSP1325-20131115|3603_1   1 RDLKPENLLLKDednDHEIKLADFGYAVRI-DSPDFEDLIDQCGTPGYVAPEIITHMPYGTKVDMWSAGVIIFILL-GGYPPFACADQNALYEMIKTGNYEFEEDywgHVSAEAKDLIASLLTVDPNKRLSATE 132
                 8*********98665679************.4455555666666778*************************9665.599***************7766544443122789999***************88766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       653  (0.0477618); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.52
# Mc/sec: 1364.08
//
Query:       MMETSP1325-20131115|3597_1  [L=388]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-66  220.6  28.3    7.6e-38  128.6   6.3    2.1  2  PF03382.9 Mycoplasma protein of unknown function, DUF285
    0.00023   20.7   0.2    0.00044   19.7   0.2    1.4  1  PF12937.2 F-box-like
  ------ inclusion threshold ------
        0.5    9.6   3.6       0.74    9.1   2.5    1.2  1  PF10500.4 Nuclear RNA-splicing-associated protein
        1.5    8.7   6.9          4    7.3   4.8    1.7  1  PF06112.6 Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.6   6.3   2.2e-41   7.6e-38      15     110 ..     187     282 ..     179     282 .. 0.96
   2 !  105.7   7.7   2.7e-34   9.2e-31      16     109 ..     263     356 ..     262     361 .. 0.90

  Alignments for each domain:
  == domain 1    score: 128.6 bits;  conditional E-value: 2.2e-41
   PF03382.9  15 qdiskwdtsnvtdmssmFsgakkfnqdiskWdtsnVtnmsemFsgatsfnqdiskwntsnVtnmssmFkgatsfnqdissWnvskvtdmssmfena 110
                   i +wdts++t+m+++F ++ +fn+d+s Wd+snVtnm++mF+gatsfn d+s w++s+Vt+m  mF+gatsfn d+s W+vs+vtdm++mf++a
  MMETSP1325-20131115|3597_1 187 GPIASWDTSEITSMEQLFMRKADFNADLSGWDVSNVTNMNRMFNGATSFNADLSGWDVSSVTDMGGMFNGATSFNADLSGWDVSSVTDMNNMFDGA 282
                 5799*****************************************************************************************875 PP

  == domain 2    score: 105.7 bits;  conditional E-value: 2.7e-34
   PF03382.9  16 diskwdtsnvtdmssmFsgakkfnqdiskWdtsnVtnmsemFsgatsfnqdiskwntsnVtnmssmFkgatsfnqdis.sWnvskvtdmssmfen 109
                 d+s wd+s+vtdm++mF ga++fn+d+s Wd+s+Vtnm+ mF +atsfn d+s+w++s+V++m+smF+gatsf+++++ +W+ s + + ++mf++
  MMETSP1325-20131115|3597_1 263 DLSGWDVSSVTDMNNMFDGATSFNADLSGWDVSSVTNMDCMFCDATSFNADLSSWDVSSVKTMRSMFRGATSFTRQLTgTWSNSLA-TKNQMFSD 356
                 799**********************************************************************7776538865555.55678876 PP

>> PF12937.2  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.2   1.3e-07   0.00044      13      42 ..      33      63 ..      30      66 .. 0.91

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.3e-07
                HTTS-.HHHHHHH----HHHHHHHHT-HHHH CS
   PF12937.2 13 FsyLp.psdLlrlalVCrrWrrvaldtlLWr 42
                F++L+ p d lr++++ rrW+++a  +++Wr
  MMETSP1325-20131115|3597_1 33 FHFLDgPADVLRASATNRRWHDLACADSVWR 63
                89997366**********************8 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.5   0.00022      0.74      61      78 ..      91     108 ..      50     115 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00022
   PF10500.4  61 ssssssssssssssssss 78 
                 s  sssssss+sss ss 
  MMETSP1325-20131115|3597_1  91 SGASSSSSSSASSSCSSG 108
                 444555555555554443 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   4.8    0.0012         4      86     136 ..      66     121 ..      43     129 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0012
   PF06112.6  86 ssigsalsassssasgvpggaa.....lSsssvsalsSgpsslsssssesssdasa 136
                 +++ ++l  + +  ++vp++++     +Ssss s++sS+ ss++++  e + +++ 
  MMETSP1325-20131115|3597_1  66 AKREGILKKAGAFEVAVPSVTGagtsgASSSSSSSASSSCSSGTAAVDEGGGGGGG 121
                 44555555554445555544444445588888888888888888886665555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.37s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1660.33
//
Query:       MMETSP1325-20131115|3604_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.9    6.2  19.6         12    5.4  13.6    1.4  1  PF13436.1 Glycine-zipper containing OmpA-like membrane domain


Domain annotation for each model (and alignments):
>> PF13436.1  Glycine-zipper containing OmpA-like membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  13.6   0.00091        12      58     101 ..     130     172 ..     114     183 .. 0.70

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.00091
   PF13436.1  58 vGaavGAaagaaaggagagaaiGAaaGllvGaaaGagagqassy 101
                 +Ga +GA ag  +g  gaga+ GA++G+l+ +a+G   ++ +++
  MMETSP1325-20131115|3604_1 130 AGASAGAGAGVGVGA-GAGAGAGAGVGGLTVMASGKAGSARAKA 172
                 466677777777777.8888888888888888877655554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.33s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1103.32
//
Query:       MMETSP1325-20131115|3607_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.31s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 723.19
//
Query:       MMETSP1325-20131115|3607_2  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 889.50
//
Query:       MMETSP1325-20131115|3609_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-14   53.4   0.0    2.8e-14   53.4   0.0    1.0  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.0   2.1e-18   2.8e-14      71     124 ..      11      61 .]       1      61 [] 0.80

  Alignments for each domain:
  == domain 1    score: 53.4 bits;  conditional E-value: 2.1e-18
  PF00160.16  71 esipdEikkkklkhkr.GalamartgpepnsngsqFfItlgdaphlDgkytvFGk 124
                  ++ dE   + ++h+r G+lama++g  pnsn+sqF+It++ +p+lD++++vFG+
  MMETSP1325-20131115|3609_1  11 GEFYDEA--FVHTHCRpGVLAMANNG--PNSNTSQFYITTATCPWLDRDHVVFGH 61 
                 3477888..46678555******997..7*************************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|3610_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        64  (0.0046811); expected 273.4 (0.02)
Passed bias filter:                       60  (0.00438853); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 374.43
//
Query:       MMETSP1325-20131115|3611_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 733.00
//
Query:       MMETSP1325-20131115|3612_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|3606_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-44  148.6   0.6    5.5e-44  148.2   0.4    1.1  1  PF02991.11 Autophagy protein Atg8 ubiquitin like
     0.0083   16.1   0.0      0.012   15.6   0.0    1.2  1  PF04110.8  Ubiquitin-like autophagy protein Apg12


Domain annotation for each model (and alignments):
>> PF02991.11  Autophagy protein Atg8 ubiquitin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.2   0.4   8.1e-48   5.5e-44       1      95 [.      11     105 ..      11     111 .. 0.97

  Alignments for each domain:
  == domain 1    score: 148.2 bits;  conditional E-value: 8.1e-48
                 CHCHHHHHHHHH-TTEEEEEEEE-SS--S---S-SEEEEETTSBHHHHHHHHHHHTT--TTS--EEEETTB-SSSSSBHHHHHHHC------EEE CS
  PF02991.11   1 krkkesekirekypdriPvivekaekeklpeldkkkylvPedltvgqlvliirkrlqlepekalfllvnetlpstsatmsalyeeekdedgflyv 95 
                 +rk+e+e+ir+kypdriPvi+eka+k+++p++dkkkylvP+dltvgq++++irkr++l pe+a+f+++ +++p++++ ms++yeeekdedgfly 
  MMETSP1325-20131115|3606_1  11 RRKSEAERIRSKYPDRIPVICEKADKSDIPDIDKKKYLVPADLTVGQFMYVIRKRIKLPPERAIFIFIRNVIPQQASLMSTIYEEEKDEDGFLYK 105
                 699*******************************************************************************************5 PP

>> PF04110.8  Ubiquitin-like autophagy protein Apg12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.8e-06     0.012      10      68 ..      37      94 ..      30     108 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.8e-06
                ------S--EEEE----BTHHHHHHHHHHCT...-SS-EEEEEEEE---TTSBHHHHHH CS
   PF04110.8 10 gdvpilkkkklkvnasdtvakvilflkkeLklqaseslflYvnnsFaPsPdeeveeLye 68
                +d+p + kkk+ v a  tv +++  ++k++kl+ +  +f+++ n   P     + ++ye
  MMETSP1325-20131115|3606_1 37 SDIPDIDKKKYLVPADLTVGQFMYVIRKRIKLPPERAIFIFIRNVI-PQQASLMSTIYE 94
                68999*************************************9864.555556666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|3616_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 593.88
//
Query:       MMETSP1325-20131115|3613_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-52  178.6   8.1    2.4e-52  177.8   5.6    1.3  1  PF00112.18 Papain family cysteine protease
    2.8e-14   53.0   0.6    4.1e-14   52.4   0.4    1.3  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)
    2.8e-05   22.7   0.2     0.0086   14.5   0.2    2.2  2  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.8   5.6   5.3e-56   2.4e-52       4     214 ..     131     327 ..     128     332 .. 0.91

  Alignments for each domain:
  == domain 1    score: 177.8 bits;  conditional E-value: 5.3e-56
                 B--CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-TTTS-TT----HHHHHHHHHHC---BBTTTS---SSC-....S--CCCC--C.CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTS CS
  PF00112.18   4 svDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCskeenegCnGGlmenafeyikknggivtekdypYkakeg...gkCkkkkkkekevakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgies 214
                 + Dw    ++ tpvkdqg CGsCWafs +++le+  + +  ++++ l+ q+lv+C++  ++gCnGG++++ ++yi + gg+v+e+dypY++ ++   g+C+ + +++  v ++++y +++   e++++++++++gP+++a+dase+  ++Y++G++++  c + +++hav++vG +++    yW ++NSWg++wGe+GYir+a g+n +c+++ 
  MMETSP1325-20131115|3613_1 131 TADWTG--TYTTPVKDQGYCGSCWAFSVTEQLESDAMRTL-GTSYILAPQQLVSCDS-GDSGCNGGWPTTGYDYIESAGGMVQESDYPYTSGTSgssGSCTGDLSDK--VLTVSNYYTLSG--EASMAAHMTSTGPIAIAVDASEW--SSYTGGIMSS--CGT-SIDHAVQAVGVDTS---SYWKIRNSWGSSWGESGYIRLAYGSN-TCDLTY 327
                 568877..479**************************999.7**************8.99******************************55544558999987663..699*****9998..699*******************5..9********8..995.9*********9998...9***********************88.**9875 PP

>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   0.4     9e-18   4.1e-14       1      58 []      42     101 ..      42     101 .. 0.89

  Alignments for each domain:
  == domain 1    score: 52.4 bits;  conditional E-value: 9e-18
   PF08246.7   1 FeswmdaygkkYrhsseinerfenFkeNlrqiqehN...anknvtftlglNkfsDlsheEf 58 
                 ++s++++ygk+Y + +e  +rf++F +Nl+ i e N   ++   t   g++kfsDls+eEf
  MMETSP1325-20131115|3613_1  42 WQSFKKEYGKNY-DAEEDASRFAIFVQNLKVIDERNakeKKAGGTAIHGITKFSDLSQEEF 101
                 89**********.***********************543344444589************9 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0   0.00072       3.3      54      84 ..     138     168 ..      89     177 .. 0.82
   2 !   14.5   0.2   1.9e-06    0.0086     358     395 ..     282     314 ..     270     319 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00072
  PF03051.10  54 etdevtnqkqsGRCWlFaalnvlRlkllkkl 84 
                  t +v +q   G CW F+ + +l  + +++l
  MMETSP1325-20131115|3613_1 138 YTTPVKDQGYCGSCWAFSVTEQLESDAMRTL 168
                 56799***************99998888765 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 1.9e-06
  PF03051.10 358 lmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyf 395
                  ++Ha+  +gvd      ++ wk+ nsWG   Ge Gy 
  MMETSP1325-20131115|3613_1 282 SIDHAVQAVGVDT-----SSYWKIRNSWGSSWGESGYI 314
                 5789999888888.....789****************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       551  (0.0403013); expected 273.4 (0.02)
Passed bias filter:                      443  (0.032402); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.53
# Mc/sec: 1523.72
//
Query:       MMETSP1325-20131115|3617_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|3618_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 861.67
//
Query:       MMETSP1325-20131115|3615_1  [L=407]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-89  296.3   0.0    7.4e-89  296.0   0.0    1.1  1  PF00834.14 Ribulose-phosphate 3 epimerase family
    4.6e-06   26.1   0.0     0.0011   18.4   0.0    2.6  2  PF01729.14 Quinolinate phosphoribosyl transferase, C-terminal domain
     0.0016   17.6   0.0      0.003   16.7   0.0    1.4  1  PF00977.16 Histidine biosynthesis protein
  ------ inclusion threshold ------
       0.06   12.3   0.0       0.27   10.2   0.0    1.9  2  PF02581.12 Thiamine monophosphate synthase/TENI


Domain annotation for each model (and alignments):
>> PF00834.14  Ribulose-phosphate 3 epimerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.0   0.0   2.2e-92   7.4e-89       2     200 ..      52     251 ..      51     252 .. 0.99

  Alignments for each domain:
  == domain 1    score: 296.0 bits;  conditional E-value: 2.2e-92
                 EEEBGGGS-GGG---HHHHHHH----EEEEEEE----SS------HHHHHHGGG.E-S-EEEEEESSSHHHCHHHHHH----EEEEB-ST-TTHHHHHHHHHH---B---EE-TT--GGGGTTTCCC-SEEEEESS----------CCHHHHHHHHHHHHHH-----EEEEE----TTTCHHHHH----EEEE--TTTTS CS
  PF00834.14   2 iapSllsadfarlgeevkavekagadllHvDvmDghfvpNltigplvvealrkl.telpldvHLmveevdrlipefaeagadiisfHaEasehlkrtiqeikeaGakagvvlnpatplealeyllekldlvllmsvePgfgGQsFipsvlekikkvrklidekeldlkievDGGvkldnieqiaeagadvlVagsavfka 200
                 iapS+lsadfa+lg evk++ + gad++H+DvmD+h+vpNltigp+v++alr++  e p+dvHLmv++vdr++ +faeaga++i+fH+Eas+h++rt++ i++ G+k+g+v+npatpl++ +y+++kld++llmsv+PgfgGQsFip++lek k++rk+ide+++d+++++DGGv++ ni+++aeag+d++Vagsa+fk+
  MMETSP1325-20131115|3615_1  52 IAPSILSADFATLGAEVKNAMEGGADVVHFDVMDNHYVPNLTIGPMVCKALRNYgIEEPIDVHLMVSPVDRIVGDFAEAGATYITFHPEASPHVDRTLSLIRSYGCKSGLVFNPATPLDICKYVMDKLDIILLMSVNPGFGGQSFIPATLEKAKEARKMIDESGYDIRLQIDGGVSAGNIKEVAEAGVDMFVAGSAIFKE 251
                 9*****************************************************999*********************************************************************************************************************************************96 PP

>> PF01729.14  Quinolinate phosphoribosyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.0    0.0047        16      91     112 ..      66      87 ..      60     103 .. 0.88
   2 !   18.4   0.0   3.2e-07    0.0011     110     158 ..     200     248 ..     169     254 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0047
                 HHHHHHHHG--SEEEEES--HH CS
  PF01729.14  91 eeleealeagadiimLDnfsve 112
                 +e+++a+e gad++ +D ++ +
  MMETSP1325-20131115|3615_1  66 AEVKNAMEGGADVVHFDVMDNH 87 
                 699**************99865 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 3.2e-07
                 -HHHHHHHHHHHHHHTTTSEEEEE----TTTHHHHHH----EEE---TT CS
  PF01729.14 110 sveelkeaveelkelagrvllevSGgvtlenveeyaktgvdvisvgalt 158
                 ++e+ kea ++++e   +++l+  Ggv+  n++e+a+ gvd++  g+++
  MMETSP1325-20131115|3615_1 200 TLEKAKEARKMIDESGYDIRLQIDGGVSAGNIKEVAEAGVDMFVAGSAI 248
                 668889999999999999**************************99986 PP

>> PF00977.16  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   8.8e-07     0.003      58     119 ..     204     262 ..     197     272 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 8.8e-07
                 HHHHHHHHHHHHTT-SSEEEEE----SHHHHHHHHH----EEEESHHHHH-THHHHHHHHH- CS
  PF00977.16  58 reanldlveeiaeevfiplqvGgGIrsledveelleagadkviigtaavknpelikelaekf 119
                  ++ ++++ e      i lq++gG++  + ++e+ eag+d  + g+a +k+p  ++   e +
  MMETSP1325-20131115|3615_1 204 AKEARKMIDESGYD--IRLQIDGGVSAGN-IKEVAEAGVDMFVAGSAIFKEPRTLEAYTETI 262
                 55555555555444..9********9998.***********************999888766 PP

>> PF02581.12  Thiamine monophosphate synthase/TENI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.17   5.8e+02      11      35 ..      61      85 ..      50     115 .. 0.70
   2 ?   10.2   0.0   7.8e-05      0.27     134     180 .]     197     248 ..     167     248 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.17
  PF02581.12 11 neellevveealkggvtlvqlReke 35
                 ++l + v++a++gg+++v++   +
  MMETSP1325-20131115|3615_1 61 FATLGAEVKNAMEGGADVVHFDVMD 85
                4667778888888888888876655 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 7.8e-05
  PF02581.12 134 eplgleglkelaeale.....iPvvaiGGitlenvaevleagadgvAvvsai 180
                  p  le++ke+++++      i +   GG+++ n++ev+eag+d+  + sai
  MMETSP1325-20131115|3615_1 197 IPATLEKAKEARKMIDesgydIRLQIDGGVSAGNIKEVAEAGVDMFVAGSAI 248
                 577888999999999899999999999*****************99998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       402  (0.0294032); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.38s 00:00:01.12 Elapsed: 00:00:00.57
# Mc/sec: 1681.58
//
Query:       MMETSP1325-20131115|3622_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.35s 00:00:00.63 Elapsed: 00:00:00.46
# Mc/sec: 177.12
//
Query:       MMETSP1325-20131115|3623_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 484.06
//
Query:       MMETSP1325-20131115|3625_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-25   88.5   0.0    3.4e-25   88.5   0.0    1.0  1  PF06098.6 Radial spoke protein 3


Domain annotation for each model (and alignments):
>> PF06098.6  Radial spoke protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.5   0.0   2.5e-29   3.4e-25      47     147 ..      45     144 .]       3     144 .] 0.81

  Alignments for each domain:
  == domain 1    score: 88.5 bits;  conditional E-value: 2.5e-29
   PF06098.6  47 rkkelqnakivetpeevegrkhievqtekyLeeltdkieeadaetqtdafldrpptpkyvpkktGiDveTqi.eegeLFdFdleVePileVLVgktleqall 147
                 +k++ +++ i    ++  +  + +v+    L e + k    ++ tqtd f +rp+tp+yvpkktG D +Tq   +   F+Fd+eV+P+leVLV ktleq+ll
  MMETSP1325-20131115|3625_1  45 KKRSWKEKSIYDYRPP--ANDRDQVDLSAHLIEREVKAVVTEVTTQTDSFEERPETPPYVPKKTGVDMSTQMtADDQPFQFDREVKPLLEVLVHKTLEQSLL 144
                 2223333444445555..45566677777777777777789******************************9677889**********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 734.20
//
Query:       MMETSP1325-20131115|3624_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-20   70.9   0.0    7.2e-20   70.6   0.0    1.1  1  PF00501.23 AMP-binding enzyme
  ------ inclusion threshold ------
       0.07   12.4   0.1       0.17   11.1   0.1    1.7  1  PF13193.1  Domain of unknown function (DUF4009)


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0   1.1e-23   7.2e-20     325     416 ..      20     113 ..      16     115 .. 0.86

  Alignments for each domain:
  == domain 1    score: 70.6 bits;  conditional E-value: 1.1e-23
                 STT-BEE-S----EEEESTTS--B-TT-HHHHHHHBCCSTT...EEE---EEEE-TT--EEEE--GGGEEE----EEEHHHHHHHHHTSTTEEEE CS
  PF00501.23 325 eegkevppgevGEllirgpgvakGYlkdpeltaeafdedgw...lyrTGDlgrldedGyleiiGRkkdqikirGeniepgeiEsallehpgvaea 416
                  +  e+++ge+G ++++g +v++GY  +p   ++  +  g+   ++ TGD g+ d +G+++++GR k++i+++Ge  +p  +E++ll+hp ++ +
  MMETSP1325-20131115|3624_1  20 RDLTECETGEQGHICVSGTCVTSGYEYRPHMDEDP-NIKGFadgWLITGDKGYKDQHGNVFLVGRFKEIINRSGEKLSPFTVEEVLLKHPSIKTV 113
                 56689********************8887654443.333334555**********************************************9976 PP

>> PF13193.1  Domain of unknown function (DUF4009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   2.6e-05      0.17       4      21 ..     160     177 ..     158     185 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.6e-05
   PF13193.1   4 PreveFVdeLPKTrSGKI 21 
                 P  v+F +e+PK ++GK 
  MMETSP1325-20131115|3624_1 160 PESVVFMSEIPKGPTGKP 177
                 999**************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.32s 00:00:00.79 Elapsed: 00:00:00.68
# Mc/sec: 750.62
//
Query:       MMETSP1325-20131115|3627_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 696.72
//
Query:       MMETSP1325-20131115|3626_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 211.99
//
Query:       MMETSP1325-20131115|3628_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-08   31.2   0.0    1.1e-07   30.9   0.0    1.1  1  PF02181.18 Formin Homology 2 Domain
  ------ inclusion threshold ------
      0.065   12.7   0.6      0.095   12.1   0.4    1.3  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   1.6e-11   1.1e-07     314     370 ..      77     132 ..      61     133 .. 0.92

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 1.6e-11
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---TTCCHHHHHHHHHHHHHHHH CS
  PF02181.18 314 kleefleeaeeklkkleeelkeakelfkelteYfgedpkevspeeffkilreFlnef 370
                  l   l+ea e+l++le + k a++++++l+ Yf+edp  ++p++ff++l++F++ f
  MMETSP1325-20131115|3628_1  77 ELAGLLSEATERLDALERKVKGARKKYEDLLAYFCEDPA-LDPQQFFSTLHSFVSTF 132
                 5667799*******************************6.**************988 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.4   1.4e-05     0.095      88     157 ..      80     151 ..      37     158 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.4e-05
   PF04156.9  88 sqlseleeeleqleerlaeleseledleedlellq.eelksleerlesleesikelakeirelr.eeisdlk 157
                   lse+ e l++le++++   +++edl  ++ ++   + +++ + l+s+ + ++e++k++++l  +e+++++
  MMETSP1325-20131115|3628_1  80 GLLSEATERLDALERKVKGARKKYEDLLAYFCEDPaLDPQQFFSTLHSFVSTFAETRKRLARLAaSERRRQQ 151
                 456666666777777777777777777666666666666677777777777777777777777733333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      441  (0.0322557); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.41s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 809.34
//
Query:       MMETSP1325-20131115|3630_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.095   12.6   0.3        1.5    8.9   0.1    2.4  2  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00011       1.5       5      20 ..      19      35 ..      16      37 .. 0.84
   2 ?    1.3   0.0     0.036   4.9e+02       5      16 ..      80      91 ..      78     100 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00011
                EEETSSBCB.CHHHHHH CS
  PF00560.28  5 LdLsgNnlt.slppsls 20
                L L++Nnlt ++p+sl 
  MMETSP1325-20131115|3630_1 19 LALNDNNLTgDIPDSLT 35
                779***********875 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.036
                EEETSSBCBCHH CS
  PF00560.28  5 LdLsgNnltslp 16
                L ++gNn+ +l 
  MMETSP1325-20131115|3630_1 80 LTIDGNNFDELE 91
                77999*998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 506.92
//
Query:       MMETSP1325-20131115|3632_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       82  (0.00599766); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.34s 00:00:00.62 Elapsed: 00:00:00.61
# Mc/sec: 165.00
//
Query:       MMETSP1325-20131115|3633_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.0   1.0     0.0012   18.0   0.7    2.0  2  PF03706.8  Uncharacterised protein family (UPF0104)
  ------ inclusion threshold ------
       0.32   10.2   1.9       0.99    8.7   0.1    2.3  2  PF12911.2  N-terminal TM domain of oligopeptide transport permease C
        1.3    7.2   5.3       0.38    9.0   0.2    1.9  2  PF01490.13 Transmembrane amino acid transporter protein


Domain annotation for each model (and alignments):
>> PF03706.8  Uncharacterised protein family (UPF0104)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.7   2.7e-07    0.0012     119     192 ..       4      72 ..       2      86 .. 0.78
   2 ?    2.0   0.8      0.02        90     102     135 ..      92     125 ..      76     133 .. 0.73

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2.7e-07
   PF03706.8 119 lllfallalll...flsseliallllvlllillaalvlllillirlnlrffkklerkkrleerlarlidsfkeslkl 192
                 +l+fal+++l+   ++s+ +  ++l v +++l+a   +lli+++r          +kkr+e+rla l+d f  s ++
  MMETSP1325-20131115|3633_1   4 ALIFALCFALFvpkLDSLVGLLTSLCVPAAMLFAPTGFLLIIYRRM--------AQKKRREKRLAGLADPFLGSSAT 72 
                 5788888888856667777777777777777777777777777777........***************99988776 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.02
   PF03706.8 102 aaaavllerlslldllalllfallalll.flssel 135
                 a+aa ++e+++  d+++l+ +++++l l f+++  
  MMETSP1325-20131115|3633_1  92 AVAA-VVEKFGCTDVAMLVTGVIIGLALcFAIFAE 125
                 6777.999988888877777777777765444444 PP

>> PF12911.2  N-terminal TM domain of oligopeptide transport permease C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2       0.1   4.6e+02      25      36 ..       5      16 ..       4      20 .. 0.82
   2 ?    8.7   0.1   0.00022      0.99      22      46 ..     111     135 ..     106     142 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.1
   PF12911.2 25 llllillaifaP 36
                l++ + +a+f+P
  MMETSP1325-20131115|3633_1  5 LIFALCFALFVP 16
                788899999998 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00022
   PF12911.2  22 liillllillaifaPll.spy.dpdqq 46 
                  +i+ l + +aifa  + s y +  ++
  MMETSP1325-20131115|3633_1 111 GVIIGLALCFAIFAETIwSIYnT--DY 135
                 69************666255631..22 PP

>> PF01490.13  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.2   8.4e-05      0.38     331     377 ..       4      50 ..       1      63 [. 0.85
   2 ?    0.4   0.5     0.034   1.6e+02      27      51 ..     106     130 ..     104     132 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 8.4e-05
  PF01490.13 331 lvvityliAlsvpslakvlslvGatsstslsfilPalfhlkliktek 377
                  ++++++ Al+vp+l+ +++l+ ++++    ++ P  f l +++   
  MMETSP1325-20131115|3633_1   4 ALIFALCFALFVPKLDSLVGLLTSLCVPAAMLFAPTGFLLIIYRRMA 50 
                 58999**********************99999999999888887654 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.034
  PF01490.13  27 AfkqlGllvGlillllvalislytl 51 
                 A+  +G+++Gl+l +++ + +++++
  MMETSP1325-20131115|3633_1 106 AMLVTGVIIGLALCFAIFAETIWSI 130
                 89999*******9999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       568  (0.0415448); expected 273.4 (0.02)
Passed bias filter:                      455  (0.0332797); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 714.02
//
Query:       MMETSP1325-20131115|3629_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0058   15.4   0.0     0.0075   15.0   0.0    1.3  1  PF03291.11 mRNA capping enzyme


Domain annotation for each model (and alignments):
>> PF03291.11  mRNA capping enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.5e-07    0.0075     230     286 ..      43     103 ..      14     129 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5.5e-07
  PF03291.11 230 kyvynled....mvtdvpEYlvkfetlvelaeeYgleLvdkveFkdiveeeikkerskmll 286
                  y++ l+d    ++ d pE+lv+ + + ++a+  g+ +    +F+d+ +    +e ++m++
  MMETSP1325-20131115|3629_1  43 RYDFRLNDdldaAAVDAPEWLVPLPLINKIARAAGFRMTIAENFHDFTKRLKVHELERMNV 103
                 55555443222245599*******************************9655555565554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 680.39
//
Query:       MMETSP1325-20131115|3636_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|3635_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   14.1   0.8       0.05   13.0   0.6    1.5  1  PF10224.4 Predicted coiled-coil protein (DUF2205)
      0.044   13.6   0.1       0.27   11.1   0.0    2.0  2  PF07626.6 Protein of unknown function (DUF1587)
      0.089   12.7   0.3       0.18   11.7   0.1    1.6  1  PF08471.5 Class II vitamin B12-dependent ribonucleotide reductase


Domain annotation for each model (and alignments):
>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.6   1.1e-05      0.05      20      47 ..      87     114 ..      80     123 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.1e-05
   PF10224.4  20 rlieqvleLqdsLedLseRveaVkeend 47 
                  l+ q +e  ++L++L+eR+++V ee+ 
  MMETSP1325-20131115|3635_1  87 SLVLQSREVEKALRQLVERMDVVAEEHA 114
                 577889999******************7 PP

>> PF07626.6  Protein of unknown function (DUF1587)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0     6e-05      0.27      38      64 ..      18      44 ..       8      48 .. 0.86
   2 ?    0.1   0.0      0.16   7.3e+02       5      17 ..      92     104 ..      90     118 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 6e-05
   PF07626.6 38 igealsmspllleqYleaAekaldeai 64
                +g   +m +l + +Y+++Aek ld+a 
  MMETSP1325-20131115|3635_1 18 VGVFEVMHSLAITKYYDLAEKTLDQAD 44
                67778999*****************96 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.16
   PF07626.6   5 rrEYenTlrdLlg 17 
                  rE e++lr+L++
  MMETSP1325-20131115|3635_1  92 SREVEKALRQLVE 104
                 6899999999986 PP

>> PF08471.5  Class II vitamin B12-dependent ribonucleotide reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1     4e-05      0.18      15      62 ..      60     109 ..      53     128 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4e-05
   PF08471.5  15 eswSqvasdivaq.kYfr..kaGvparepdeearlggEtsvkqvvdRlagt 62 
                 ++w ++a+d++ +  Y+r  +  v+ar +   +    E+ ++q+v+R+  +
  MMETSP1325-20131115|3635_1  60 KRWVHIACDVIPKhNYYRdpRYQVHAR-SLVLQSREVEKALRQLVERMDVV 109
                 78*********8626999655566666.333336688**********8554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       799  (0.0584406); expected 273.4 (0.02)
Passed bias filter:                      458  (0.0334991); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 629.63
//
Query:       MMETSP1325-20131115|3637_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.62
# Mc/sec: 262.83
//
Query:       MMETSP1325-20131115|3638_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|3640_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.73
# Mc/sec: 403.77
//
Query:       MMETSP1325-20131115|3641_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.81
# Mc/sec: 482.23
//
Query:       MMETSP1325-20131115|3642_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-07   27.8   1.4    9.8e-07   27.7   1.0    1.1  1  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   1.0   7.2e-11   9.8e-07      54     168 ..       3     123 ..       1     142 [. 0.76

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 7.2e-11
  PF07690.11  54 rlsdrfGrrrvlllglllfalglllll.fasslwalllvlrvlqGlgagalfpagaaliadwfpk.eergralgllsagfslGailgpllgglla.sslg.....WravFlilailsllaavl 168
                 rl++ +G   +  +g+l++++g + +  +   +  l  vl ++  +ga+++ +a aal+a+ +++ eer+r lgll+++ +++ i  pl+++ l  +s g       ++F+++a  +  +a l
  MMETSP1325-20131115|3642_1   3 RLAEHIGEHMTCTAGILFAGFG-IGAQsL-VRFQPLHTVLYMVNRVGASVADTATAALVARSSNGkEERARNLGLLTSTRAAARIASPLISSKLFeASCGssfapGALPFVAAACSATAVAPL 123
                 7889999999889999999999.333344.67888******************************9**************************9995555555543333344444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 671.92
//
Query:       MMETSP1325-20131115|3645_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-05   23.4   0.0    4.9e-05   23.2   0.0    1.3  1  PF05050.7 Methyltransferase FkbM domain


Domain annotation for each model (and alignments):
>> PF05050.7  Methyltransferase FkbM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   3.6e-09   4.9e-05      90     152 ..       3      58 ..       1     105 [. 0.77

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 3.6e-09
   PF05050.7  90 ievpvvtLDdfleen..isridllKiDvEGaElevLegaeetlkrcqpnii.vEvhefkdfikplf 152
                 i v++ +L ++l+++  +sri++l +D+EGaE ++L + +  ++   +  + vE         ++ 
  MMETSP1325-20131115|3645_1   3 IHVNTSRLETLLRKHgaPSRISYLSLDIEGAESAAL-REDFPWSEFVFETLtVE---------RSP 58 
                 569999*****66666********************.44444444333335566.........333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.31s 00:00:00.73 Elapsed: 00:00:00.64
# Mc/sec: 595.34
//
Query:       MMETSP1325-20131115|3648_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 395.19
//
Query:       MMETSP1325-20131115|3649_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.6e-26   89.8   0.1    8.7e-26   89.6   0.1    1.0  1  PF11923.3 Domain of unknown function (DUF3441)


Domain annotation for each model (and alignments):
>> PF11923.3  Domain of unknown function (DUF3441)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.6   0.1   6.4e-30   8.7e-26      12      97 ..       5      82 ..       2      83 .] 0.95

  Alignments for each domain:
  == domain 1    score: 89.6 bits;  conditional E-value: 6.4e-30
   PF11923.3 12 dlealdsltgrpkpeDeilaaipvcAPwsalskykykvklqpGtaKKGkaakeilqlftakkvdekakdkdlaprerelikslkde 97
                + ++l++ltg p +eD il+a+pvc+P+ +l kykykvkl+pGt+KKGka k++++ f        +++kd++pre++++k ++d+
  MMETSP1325-20131115|3649_1  5 YVTELNKLTGIPREEDLILYAVPVCGPYMSLMKYKYKVKLTPGTQKKGKAGKQAMEVF--------TRAKDCTPREKDILKFITDN 82
                66899*****************************************************........9999***********99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 348.94
//
Query:       MMETSP1325-20131115|3652_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        90  (0.0065828); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.64
# Mc/sec: 131.05
//
Query:       MMETSP1325-20131115|3655_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   13.9   0.2      0.033   13.4   0.1    1.3  1  PF07618.6  Protein of unknown function (DUF1580)
       0.12   12.2   0.0       0.69    9.8   0.0    1.9  2  PF03330.13 Rare lipoprotein A (RlpA)-like double-psi beta-barrel


Domain annotation for each model (and alignments):
>> PF07618.6  Protein of unknown function (DUF1580)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   4.8e-06     0.033       3      52 ..      37      80 .]      35      80 .] 0.83

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.8e-06
   PF07618.6  3 lkaikletgrpav.stvlRWslkpnrhgnkLetwriGgrRrtsveaVrryi 52
                l ai  e  r++v +t+  W  ++    +       G +R+t v  V+r+i
  MMETSP1325-20131115|3655_1 37 LVAITDEGPRVSVtATAALWKPRGKNDSC-------GAQRQTRVRTVQRFI 80
                5566655558886489999*****99999.......*************97 PP

>> PF03330.13  Rare lipoprotein A (RlpA)-like double-psi beta-barrel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0001      0.69      33      50 ..      26      46 ..       1      63 [. 0.64
   2 ?    1.6   0.0     0.036   2.5e+02       3      23 ..      50      73 ..      48      78 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0001
  PF03330.13 33 crv.ls..rsvtVtitDrcpp 50
                c    s  r+v V itD +p 
  MMETSP1325-20131115|3655_1 26 CETgTSrgRPVLVAITDEGPR 46
                44442257************7 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.036
  PF03330.13  3 agsasly.ndg..tacGecyqvkc 23
                ++ a+l+  +g   +cG++ q++ 
  MMETSP1325-20131115|3655_1 50 TATAALWkPRGknDSCGAQRQTRV 73
                567788863335689999887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|3639_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.54
# Mc/sec: 1269.18
//
Query:       MMETSP1325-20131115|3658_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 606.14
//
Query:       MMETSP1325-20131115|3657_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 613.80
//
Query:       MMETSP1325-20131115|3653_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-32  112.6   0.2    2.3e-32  112.3   0.2    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.3   0.2   1.7e-36   2.3e-32       6     154 ..      44     206 ..      39     208 .. 0.80

  Alignments for each domain:
  == domain 1    score: 112.3 bits;  conditional E-value: 1.7e-36
                 XXXXXXXXX.XXXXXX....----TTTTT--------TTT------------------S--TT--.STT---...--...--S-TT.THHHH---HHHHHHHHTT---------------........---------..-----------STTT----TTTTT------ CS
  PF00504.16   6 dgslpgdlg.fDplgls...kdptlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeagg...ls...lptllalqillligflelareqelkapesegsekraypGg........lgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvvq 154
                 d+ + +++g +Dp+gl+   +d+t++++r+aEl+HGRvAM+av+G++v+ l++++++a    +++++++ g+   +    l +++ +qi+ ligfle+ +e    +p     ++ + pG+         ++dp+g     +ee+k+  ++kEi nGRlAMia+++f+++
  MMETSP1325-20131115|3653_1  44 DEGAMPPVGfWDPWGLAelgSDETMAWFRHAELKHGRVAMAAVTGWCVTALGIHFPGAI-DYSGTTFESLGTdpiAAwdaLSGAGKFQIIGLIGFLEFHSELA--KPHV---MRGGTPGKitpllgpiSLWDPIGTMggLSEEQKFVQRTKEIANGRLAMIAIMSFFAA 206
                 56688999********9665566*******************************77543.334444444553343113358889999***********75544..4433...568999999999999988****95459***************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 1066.13
//
Query:       MMETSP1325-20131115|3660_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0088   14.5   0.1       0.01   14.3   0.1    1.0  1  PF01306.14 LacY proton/sugar symporter


Domain annotation for each model (and alignments):
>> PF01306.14  LacY proton/sugar symporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   7.3e-07      0.01      68     113 ..      24      69 ..      17      77 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 7.3e-07
  PF01306.14  68 dklGlkkellwvislllvlfapfliyvfepllqlnilvGalvGgvf 113
                  +l l+k++ ++i +l ++ + f+i++++  +q n +v +++ +v 
  MMETSP1325-20131115|3660_1  24 AQLVLQKRISYTIGILYLMASTFYIFLYAVKVQDNEVVSSVLMSVA 69 
                 5899*******************************99988876664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       629  (0.0460064); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.57
# Mc/sec: 330.53
//
Query:       MMETSP1325-20131115|3659_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-14   51.4   0.0    7.9e-14   51.0   0.0    1.1  1  PF02153.12 Prephenate dehydrogenase
    1.5e-06   28.4   0.2    7.6e-06   26.1   0.2    2.1  1  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
    5.2e-05   23.0   0.0    0.00012   21.9   0.0    1.6  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
     0.0002   21.2   0.0     0.0004   20.3   0.0    1.5  1  PF13460.1  NADH(P)-binding
    0.00067   18.7   0.0     0.0014   17.7   0.0    1.5  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
     0.0019   17.5   0.0     0.0032   16.8   0.0    1.4  1  PF02558.11 Ketopantoate reductase PanE/ApbA
  ------ inclusion threshold ------
      0.014   15.0   0.1       0.37   10.4   0.0    2.2  2  PF10727.4  Rossmann-like domain
      0.017   15.4   0.1        0.1   12.9   0.1    2.1  1  PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold
      0.024   14.1   0.0      0.042   13.3   0.0    1.5  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
      0.028   14.0   0.0      0.053   13.1   0.0    1.4  1  PF13439.1  Glycosyltransferase Family 4
      0.059   13.2   0.0       0.16   11.8   0.0    1.8  2  PF02254.13 TrkA-N domain
       0.12   12.1   0.0       0.28   10.9   0.0    1.6  1  PF00106.20 short chain dehydrogenase


Domain annotation for each model (and alignments):
>> PF02153.12  Prephenate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.0     7e-17   7.9e-14      44     181 ..      98     233 ..      73     273 .. 0.87

  Alignments for each domain:
  == domain 1    score: 51.0 bits;  conditional E-value: 7e-17
  PF02153.12  44 keadivvlavPvevvlevlkelap....hlkeaalitDvgsvKeeivkeleqllsektkfvgghPmaGteksGvkaaranlfenavviLtPtektdkealekvkelleelgakvillspeeHDrvvalvshlphvvasalaa 181
                    d+v++av +  ++e++  l      + ++++l++Dv svK ++ + l+q+ + +  +  +hPm+G+      ++   ++ + +++     +t+ e+ e   +++e  g  ++ +++  HD+  a  + ++h+v   l +
  MMETSP1325-20131115|3659_1  98 ARLDVVIVAVSILSFEETVVGLPMellgQREDGCLLVDVLSVKMHPKAVLQQMAPPNCDVLCTHPMFGP------ESGRGSWSKLPFVFEKVRDTNCERTERFLSVFETEGCTMVEMDATRHDENAANSQFATHLVGRLLEQ 233
                 346*********9999998765542111557899***********************************......677999******************************************************9876655 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.2   6.7e-09   7.6e-06       2      78 ..      27     116 ..      26     138 .. 0.67

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 6.7e-09
  PF03807.12   2 igiiGaGnigealakglaaagaqkheviiaasrspekaeelaeelg................vkvtavsneeaae.eadvvilavkpedveevl 78 
                 ig+iG+G++g+ la++++++g   h+v    srs  + e+ +  ++                ++  + + +   + + dvvi+av    +ee++
  MMETSP1325-20131115|3659_1  27 IGVIGFGKFGQFLARRFLSQG---HQVSCL-SRSDRRPEAKEMGVEhfgglgaseqevasksAEYNGGPSAFLTQaRLDVVIVAVSILSFEETV 116
                 9********************...****55.888887766544443666777777666666633333333333323567777777666666665 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0     1e-07   0.00012       3      91 ..      26     135 ..      25     152 .. 0.62

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1e-07
                 EBEEB-------HHHHHHHH---EEEE--SSHHHHHHHHHTT..................EEE-SSHHHHHHHB..SEEEE-SSSHHHHHHHHHH...HCCC-----EEEE CS
  PF03446.10   3 kigfiGlGvMGspmalnllkagyevavynrtkekveelvaeg..................akaaesieelvasl..dvvilmvkagkavdeviege..llealekgdilid 91 
                 +ig+iG G+ G+ +a+++l++g++v++  r+  + e + + g                  a+    ++++++++  dvvi+ v+  +  + v+     ll + e g +l+d
  MMETSP1325-20131115|3659_1  26 SIGVIGFGKFGQFLARRFLSQGHQVSCLSRSDRRPE-AKEMGvehfgglgaseqevasksAEYNGGPSAFLTQArlDVVIVAVSILSFEETVVGLPmeLLGQREDGCLLVD 135
                 69*************************998854333.33333233455555555555444555555555555556666666665544444444333345555555555555 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   3.5e-07    0.0004       1      42 [.      27      68 ..      27      86 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 3.5e-07
   PF13460.1  1 IaviGAtGktGrrivkellarghevtalvRnpsklpe.ssgvt 42
                I viG  Gk G+ ++++ l++gh+v +l+R++ + ++ + gv+
  MMETSP1325-20131115|3659_1 27 IGVIG-FGKFGQFLARRFLSQGHQVSCLSRSDRRPEAkEMGVE 68
                78999.7*************************99877655555 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.2e-06    0.0014      26      81 ..      14      68 ..       2      80 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.2e-06
                -GCG-B-.GGGSEEE-B-------HHHHHHHH---EEEE--SS--...HHHH---E CS
  PF02826.14 26 ekallgkelsgktvGiiGlGrIGqavakrlkafgmkvlaydrskkkeeeeeelgae 81
                +++    + +  ++G+iG+G+ Gq +a+r+ + g +v + +rs ++ e ++e+g+e
  MMETSP1325-20131115|3659_1 14 KEKAALLKARPLSIGVIGFGKFGQFLARRFLSQGHQVSCLSRSDRRPE-AKEMGVE 68
                4555556677889******************************88665.8887774 PP

>> PF02558.11  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.8e-06    0.0032       1      75 [.      27     107 ..      27     119 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2.8e-06
                 EEEE-----------HHHHHHH-EEEE----HHHHHH----EEE-SS-EEE---SEEES-T.......TT----SEEEE-- CS
  PF02558.11   1 iailGaGaiGsllaakLakagadvtlilrsrrlealkknglrlksdkgeeivrppealsee......kqelepidllivtv 75 
                 i ++G G  G++la ++  +g++v ++ rs+r  + k+ g++  +  g     ++ + +e          ++  d++iv+v
  MMETSP1325-20131115|3659_1  27 IGVIGFGKFGQFLARRFLSQGHQVSCLSRSDRRPEAKEMGVEHFGGLGASEQEVASKSAEYnggpsaFLTQARLDVVIVAV 107
                 78*****************************44445777765544443333333333333345677744677889999988 PP

>> PF10727.4  Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00032      0.37       9      42 ..      23      56 ..      12      68 .. 0.83
   2 ?    2.4   0.0     0.095   1.1e+02      67     127 .]      98     162 ..      77     162 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00032
   PF10727.4  9 arLsvGiisaGrvgvalgealeraghvvvavsai 42
                  Ls+G+i  G+ g  l++++ + gh+v  +s  
  MMETSP1325-20131115|3659_1 23 RPLSIGVIGFGKFGQFLARRFLSQGHQVSCLSRS 56
                449*************************887654 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.095
   PF10727.4  67 araeLvvlavpDaelaglveglaat..gavraGqivvht..sganGveilaPleeeGaiplaihP 127
                 ar ++v++av+  + +++v gl     g   +G ++v +    ++   +l+ ++   + +l+ hP
  MMETSP1325-20131115|3659_1  98 ARLDVVIVAVSILSFEETVVGLPMEllGQREDGCLLVDVlsVKMHPKAVLQQMAPPNCDVLCTHP 162
                 678899999*999******9997642266778988887632357888899988888888888888 PP

>> PF01408.17  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   9.1e-05       0.1       2      70 ..      26     107 ..      25     169 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.1e-05
                 EEEEE----HHHHHHHHHHHCHCSEEEEEEEGSSHCCHHHHHHHCTHHCCSS.............HHHHHHSTT-SEEEE-S CS
  PF01408.17   2 rvgivGaGkigsrhlrplnesqrreelvalvdpdperaeavaesfgveaysd.............leelledpkidavivat 70 
                  +g++G+Gk+g+  +r +  + +++      d++pe+ e   e+fg    s+              ++ l++ + d+viva+
  MMETSP1325-20131115|3659_1  26 SIGVIGFGKFGQFLARRFLSQGHQVSCLSRSDRRPEAKEMGVEHFGGLGASEqevasksaeynggPSAFLTQARLDVVIVAV 107
                 69****************9997777777777777777776656555442222456666777788877778877888888876 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.7e-05     0.042       2      44 ..      27      69 ..      26     107 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.7e-05
                EEEE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHH CS
  PF02737.13  2 vaVvGaGtmGagiAavfaragleVvlvdiseealekaleriek 44
                ++V+G G  G+ +A  f+++g++V  + +s+ + e+ +  +e+
  MMETSP1325-20131115|3659_1 27 IGVIGFGKFGQFLARRFLSQGHQVSCLSRSDRRPEAKEMGVEH 69
                89*************************9998888877776665 PP

>> PF13439.1  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.6e-05     0.053      21      54 ..      39      72 ..      38      91 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.6e-05
   PF13439.1 21 laealarrGheVtvvapevgepleeelvvevvrv 54
                la+ + ++Gh+V++++++ ++p+++e +ve+   
  MMETSP1325-20131115|3659_1 39 LARRFLSQGHQVSCLSRSDRRPEAKEMGVEHFGG 72
                89************************66655554 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00014      0.16       2      39 ..      28      64 ..      27      82 .. 0.77
   2 ?   -3.6   0.0       8.4   9.5e+03      34      52 ..     195     213 ..     189     215 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00014
                EEE---HHHHHHHCCCHH.--..EEEEES-HHHHHHHHH CS
  PF02254.13  2 iiiGlGrvGrslaeeLre.gekdvvvidkdeerveelre 39
                 +iG+G++G+ la+++ + g+ +v+ + ++++r  e++e
  MMETSP1325-20131115|3659_1 28 GVIGFGKFGQFLARRFLSqGH-QVSCLSRSDRR-PEAKE 64
                59***************9566.7*999998754.44444 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 8.4
                 HHHHHH---EEEE--TTSH CS
  PF02254.13  34 veelreeglevvvgdatde 52 
                 +   + eg+++v+ dat+ 
  MMETSP1325-20131115|3659_1 195 LSVFETEGCTMVEMDATRH 213
                 5556678888999999876 PP

>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00025      0.28       8      87 ..      31     106 ..      29     124 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00025
                 -------HHHHHHHHHSSEEEEEEESS.SHHHHHHH.HHHHHH---EEEEEE--TTSH.HHHHHHHHHHHHH----SEEEEE CS
  PF00106.20   8 GlgglGlalArwLveegarhlvlvsrredapgaael.iaelealgaevtvvacDvadr.dalaallaeirkalgpldgvvhn 87 
                 G g +G  lAr+++++ + ++ ++sr+ + p+a+e+ +++   lga+ + va   a+     +a+l+++r     ld+v+ +
  MMETSP1325-20131115|3659_1  31 GFGKFGQFLARRFLSQ-GHQVSCLSRSDRRPEAKEMgVEHFGGLGASEQEVASKSAEYnGGPSAFLTQAR-----LDVVIVA 106
                 689*************.77999999998999999998999999997766655443333133344444444.....6666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.65
# Mc/sec: 1187.12
//
Query:       MMETSP1325-20131115|3661_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.50
# Mc/sec: 206.09
//
Query:       MMETSP1325-20131115|3662_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|3663_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|3666_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.9e-09   35.5   5.3    1.3e-08   34.8   3.7    1.3  1  PF06695.6 Putative small multi-drug export protein
  ------ inclusion threshold ------
       0.55    9.2   4.8       0.28   10.2   2.1    1.4  1  PF11299.3 Protein of unknown function (DUF3100)
        2.2    7.6   4.0       0.94    8.8   0.2    1.8  2  PF04281.8 Mitochondrial import receptor subunit Tom22


Domain annotation for each model (and alignments):
>> PF06695.6  Putative small multi-drug export protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   3.7   2.8e-12   1.3e-08      85     121 .]       1      37 [.       1      37 [. 0.98

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 2.8e-12
   PF06695.6  85 lPgTGawtGslaaslLgldfkkallaillGvllagvi 121
                 lPgTGawtG++ a+lLg++f +a+++i++Gv++agvi
  MMETSP1325-20131115|3666_1   1 LPGTGAWTGAMGAFLLGMPFGTAMASIFAGVVTAGVI 37 
                 8**********************************98 PP

>> PF11299.3  Protein of unknown function (DUF3100)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.1   6.1e-05      0.28     141     173 ..       7      39 ..       3      48 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 6.1e-05
   PF11299.3 141 grGvlavyiiGtvfGalffsllasllaslkild 173
                 ++G ++ +++G  fG+ + s++a+++++  i++
  MMETSP1325-20131115|3666_1   7 WTGAMGAFLLGMPFGTAMASIFAGVVTAGVIMS 39 
                 68**********************998766665 PP

>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.2   0.00021      0.94      91     113 ..       3      25 ..       1      27 [. 0.87
   2 ?    0.3   0.2     0.089     4e+02      79     105 ..      33      58 ..      26      65 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00021
   PF04281.8  91 GkllwvvttsaLLlGvPlaLaie 113
                 G  +w+ +  a+LlG+P+  a++
  MMETSP1325-20131115|3666_1   3 GTGAWTGAMGAFLLGMPFGTAMA 25 
                 6779**************87765 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.089
   PF04281.8  79 ttslvksglsfaGkllwvvttsaLLlG 105
                 t+ ++ s+l+ +Gk   ++t  ++LlG
  MMETSP1325-20131115|3666_1  33 TAGVIMSTLTAGGKWGAIIT-GTFLLG 58 
                 56678888888888765555.455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 313.70
//
Query:       MMETSP1325-20131115|3665_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 625.14
//
Query:       MMETSP1325-20131115|3668_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|3667_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 387.77
//
Query:       MMETSP1325-20131115|3669_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 368.01
//
Query:       MMETSP1325-20131115|3671_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-21   72.5   1.1    4.9e-08   32.2   0.1    3.1  3  PF00023.25 Ankyrin repeat
    7.4e-19   67.7   0.6    3.4e-17   62.4   0.1    1.6  2  PF12796.2  Ankyrin repeats (3 copies)
    2.9e-18   65.3   0.5    3.6e-11   42.8   0.0    3.0  3  PF13857.1  Ankyrin repeats (many copies)
    1.9e-13   49.1   0.1    0.00059   19.7   0.0    3.1  3  PF13606.1  Ankyrin repeat
    3.9e-12   46.2   0.2    9.6e-11   41.8   0.1    2.3  2  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00054       1.5       3      29 ..      12      38 ..      10      41 .. 0.91
   2 !   29.4   0.0   1.4e-10   3.9e-07       3      32 ..      51      82 ..      51      83 .. 0.88
   3 !   32.2   0.1   1.8e-11   4.9e-08       2      32 ..      85     115 ..      84     116 .] 0.94

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00054
                CBHHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25  3 fTPLHlAalrgnlevvklLlsqGAdln 29
                + PL l a  gn++ v+  l +GA  n
  MMETSP1325-20131115|3671_1 12 WNPLQLLAAEGNTKGVEAMLTAGAQAN 38
                78**********************876 PP

  == domain 2    score: 29.4 bits;  conditional E-value: 1.4e-10
                CBHHHHHHHTTHHHHHHHHHH..TTSSTTHBH CS
  PF00023.25  3 fTPLHlAalrgnlevvklLls..qGAdlnaqd 32
                +T+LH+A+++g++evv+ L++    Adl+++d
  MMETSP1325-20131115|3671_1 51 QTALHIASRYGHAEVVRALVGrdPDADLDLRD 82
                6********************77777777776 PP

  == domain 3    score: 32.2 bits;  conditional E-value: 1.8e-11
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 GfT+LH+Aa +g+ + v  Ll+ GA++  ++
  MMETSP1325-20131115|3671_1  85 GFTALHYAAVHGHGNTVDTLLQLGASISEKT 115
                 9*************************98876 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00031      0.85      58      86 ..      10      38 ..       3      42 .. 0.75
   2 !   62.4   0.1   1.2e-20   3.4e-17       1      88 [.      15     114 ..      15     115 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00031
   PF12796.2 58 egntpLhlAvrnghlelvklLlekgadvn 86
                e ++pL l +  g+++ v+ +l++ga  n
  MMETSP1325-20131115|3671_1 10 EDWNPLQLLAAEGNTKGVEAMLTAGAQAN 38
                56788888888888888888888877665 PP

  == domain 2    score: 62.4 bits;  conditional E-value: 1.2e-20
   PF12796.2   1 LhlAaengnlelvklLlekgadvdl..........getpLhlAaeagnleivklLleag..advnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                 L l a  gn + v+ +l +ga  ++           +t+Lh+A+++g+ e+v++L+ +   ad++ +d +g t+Lh+A+ +gh  +v+ Ll+ ga+++ +
  MMETSP1325-20131115|3671_1  15 LQLLAAEGNTKGVEAMLTAGAQANFhatskvpgmpWQTALHIASRYGHAEVVRALVGRDpdADLDLRDGSGFTALHYAAVHGHGNTVDTLLQLGASISEK 114
                 5678999*************999986666666555555*******************87335678888***************************99875 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0074        20      18      43 ..      13      38 ..       2      44 .. 0.80
   2 !   42.8   0.0   1.3e-14   3.6e-11      16      56 .]      50      92 ..      49      92 .. 0.97
   3 !   26.9   0.0   1.3e-09   3.5e-06       1      44 [.      69     113 ..      69     116 .] 0.91

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0074
   PF13857.1 18 tpLhlAakggalevvrlLlapgadln 43
                +pL l a  g++  v+ +l +ga +n
  MMETSP1325-20131115|3671_1 13 NPLQLLAAEGNTKGVEAMLTAGAQAN 38
                9******************6666554 PP

  == domain 2    score: 42.8 bits;  conditional E-value: 1.3e-14
   PF13857.1 16 gntpLhlAakggalevvrlLl..apgadlnlrdsdgltaldlA 56
                ++t+Lh+A ++g++evvr L+  +p adl+lrd +g tal++A
  MMETSP1325-20131115|3671_1 50 WQTALHIASRYGHAEVVRALVgrDPDADLDLRDGSGFTALHYA 92
                57****************************************9 PP

  == domain 3    score: 26.9 bits;  conditional E-value: 1.3e-09
   PF13857.1   1 Llehg.padvnatdeggntpLhlAakggalevvrlLlapgadlnl 44 
                 L+ ++ +ad++ +d++g+t+Lh+Aa +g+ + v+ Ll+ ga++  
  MMETSP1325-20131115|3671_1  69 LVGRDpDADLDLRDGSGFTALHYAAVHGHGNTVDTLLQLGASISE 113
                 6778999*******************************9999865 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0032       8.8       3      29 ..      12      38 ..      10      40 .. 0.91
   2 !   19.7   0.0   2.2e-07   0.00059       3      27 ..      51      75 ..      51      80 .. 0.86
   3 !   19.4   0.0   2.6e-07    0.0007       2      29 ..      85     112 ..      84     113 .. 0.94

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0032
   PF13606.1  3 nTpLhlAasngrielveaLlengadin 29
                ++pL l a  g+++ vea+l +ga+ n
  MMETSP1325-20131115|3671_1 12 WNPLQLLAAEGNTKGVEAMLTAGAQAN 38
                79*********************9766 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 2.2e-07
   PF13606.1  3 nTpLhlAasngrielveaLlengad 27
                +T+Lh+A ++g+ e+v+aL+ + +d
  MMETSP1325-20131115|3671_1 51 QTALHIASRYGHAEVVRALVGRDPD 75
                7******************977655 PP

  == domain 3    score: 19.4 bits;  conditional E-value: 2.6e-07
   PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                 G T+Lh+Aa +g+ + v+ Ll+ ga i+
  MMETSP1325-20131115|3671_1  85 GFTALHYAAVHGHGNTVDTLLQLGASIS 112
                 89***********************986 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.11   3.1e+02       3      26 ..      13      36 ..      11      42 .. 0.79
   2 !   41.8   0.1   3.5e-14   9.6e-11       3      53 ..      52     104 ..      51     105 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.11
   PF13637.1  3 taLhyaaisgrlelvklLlekgid 26
                 +L  +a+ g+++ v+ +l  g++
  MMETSP1325-20131115|3671_1 13 NPLQLLAAEGNTKGVEAMLTAGAQ 36
                678888999999999999877766 PP

  == domain 2    score: 41.8 bits;  conditional E-value: 3.5e-14
   PF13637.1   3 taLhyaaisgrlelvklLlekgid..inrtdesGntaLhiAalrgnieilklL 53 
                 taLh a ++g+ e+v+ L+ +++d  ++ +d+sG+taLh+Aa +g+ + +  L
  MMETSP1325-20131115|3671_1  52 TALHIASRYGHAEVVRALVGRDPDadLDLRDGSGFTALHYAAVHGHGNTVDTL 104
                 79*****************99755449999***************98887666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.66
# Mc/sec: 421.18
//
Query:       MMETSP1325-20131115|3670_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-06   27.5   0.1    3.6e-05   22.6   0.0    2.6  2  PF00036.27 EF hand
    2.9e-05   23.4   0.1    0.00037   20.0   0.0    2.5  2  PF13405.1  EF-hand domain
    3.2e-05   23.8   0.2    0.00032   20.6   0.0    2.3  2  PF13499.1  EF-hand domain pair
    3.7e-05   22.7   0.8    8.5e-05   21.6   0.0    2.0  2  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.033   14.0   3.3      0.049   13.5   2.3    1.2  1  PF03202.8  Putative mycoplasma lipoprotein, C-terminal region
      0.036   13.5   0.4       0.44   10.0   0.0    2.4  2  PF13833.1  EF-hand domain pair
        0.2    9.7   7.2       0.23    9.5   5.0    1.1  1  PF08549.5  Fungal domain of unknown function (DUF1750)
       0.21   10.1   3.7       0.25    9.8   2.6    1.3  1  PF06785.6  Uncharacterised protein family (UPF0242)
        2.7    7.4  13.3        4.6    6.7   9.2    1.3  1  PF05266.9  Protein of unknown function (DUF724)


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   2.4e-08   3.6e-05       3      28 ..     151     176 ..     149     177 .. 0.91
   2 ?    2.2   0.0     0.081   1.2e+02       6      15 ..     193     202 ..     190     203 .] 0.82

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 2.4e-08
                 HHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfkealkk 28 
                 +++F+ +D+D++G+Is+ E++ a++k
  MMETSP1325-20131115|3670_1 151 RDVFNSIDTDKSGTISKGELVGAIAK 176
                 789******************99887 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.081
                 HHHHCTTTSS CS
  PF00036.27   6 FkefDkDgdG 15 
                 ++ +D+Dg+G
  MMETSP1325-20131115|3670_1 193 WSGLDQDGNG 202
                 6668*****9 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.4e-07   0.00037       3      27 ..     151     175 ..     149     183 .. 0.87
   2 ?    0.1   0.0      0.62   9.4e+02       9      15 ..     196     202 ..     192     203 .] 0.83

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.4e-07
                 H---GCC-------B---HHHHHHH CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                 r++F+ +D+d++G+i++ EL+ a+ 
  MMETSP1325-20131115|3670_1 151 RDVFNSIDTDKSGTISKGELVGAIA 175
                 79******************88775 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.62
                 C------ CS
   PF13405.1   9 fDkdgdG 15 
                 +D+dg+G
  MMETSP1325-20131115|3670_1 196 LDQDGNG 202
                 8*****9 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.42   6.4e+02      21      49 ..      84     139 ..      81     141 .. 0.65
   2 !   20.6   0.0   2.1e-07   0.00032       3      56 ..     151     203 .]     147     203 .] 0.76

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.42
   PF13499.1  21 eLlrllkhlgsels...........................deevrevldyifkel 49 
                 +L+++l + +   +                           +e+ +e +d+if+++
  MMETSP1325-20131115|3670_1  84 DLRYALEQNHKRNTgedriwdlhrtlisgkslqvddqqdyaNESAEEKADRIFARM 139
                 66666655443333666666666666667777777777777888888888888865 PP

  == domain 2    score: 20.6 bits;  conditional E-value: 2.1e-07
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgsels....deevrevldyifkelDkngdGv 56 
                 +++F+++D+d++g+++k eL+ ++ ++         de      + i+  lD +g+Gv
  MMETSP1325-20131115|3670_1 151 RDVFNSIDTDKSGTISKGELVGAIAKFTGI-ElgvdDE----AMTLIWSGLDQDGNGV 203
                 568******************999887633.2345444....4444599999999996 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   5.6e-08   8.5e-05       2      21 ..     151     170 ..     150     175 .. 0.92
   2 ?   -2.1   0.1       1.7   2.6e+03       8      14 ..     196     202 ..     196     203 .] 0.69

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 5.6e-08
                 HHHHHHH--S----B-HHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreEL 21 
                 +d+F+ +D++++G+Is+ EL
  MMETSP1325-20131115|3670_1 151 RDVFNSIDTDKSGTISKGEL 170
                 689****************9 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.7
                 H--S--- CS
   PF13202.1   8 fDlNgDG 14 
                 +D +g G
  MMETSP1325-20131115|3670_1 196 LDQDGNG 202
                 5778777 PP

>> PF03202.8  Putative mycoplasma lipoprotein, C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.3   3.2e-05     0.049      35     122 ..      26     131 ..      17     143 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.2e-05
   PF03202.8  35 weekekgkkksdqkkktaAeyfaesasYilPlkekfekskkkeseskd..................kkntntytekalelfkqvseneivsysdpsdfrsgkfrdg 122
                 +e+  k+kk ++ k++ aA++ ++ ++ i+  +e ++k+k++ +++k+                  +++ nt ++++ +l +   +++ ++  d  d+ ++   + 
  MMETSP1325-20131115|3670_1  26 DEQAAKKKKAKQLKDMKAAQFEVKLTGKIVEHREALKKQKEEGDAKKKraaqlkrkmddlryaleqNHKRNTGEDRIWDLHRTLISGKSLQVDDQQDYANESAEEK 131
                 44555566667778899********************998887777778899999999999999988889999999999999999999999999999988876655 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00029      0.44      27      48 ..     150     171 ..     134     176 .. 0.84
   2 ?    8.1   0.0    0.0011       1.7       2      40 ..     162     202 ..     161     203 .] 0.87

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00029
   PF13833.1  27 vdilfrefDtdgdGkisfeEFc 48 
                  +++f+ +Dtd++G is+ E +
  MMETSP1325-20131115|3670_1 150 TRDVFNSIDTDKSGTISKGELV 171
                 57899************98866 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0011
   PF13833.1   2 kGlItreeLkral.allglkg.lseeevdilfrefDtdgdG 40 
                 +G I++ eL  a+ + +g++  + +e ++ + + +D+dg+G
  MMETSP1325-20131115|3670_1 162 SGTISKGELVGAIaKFTGIELgVDDEAMTLIWSGLDQDGNG 202
                 799**********66669998777777999999*******9 PP

>> PF08549.5  Fungal domain of unknown function (DUF1750)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.0   0.00015      0.23     344     456 ..      25     138 ..      16     174 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00015
   PF08549.5 344 dsdegtekkqatklePekadefadrvlkkvaddtaeieklkkrhakrleklrktsalkdaeqrlrdaaadp..edtGse.iwrleGrlelddeddes..rlaqvetkakykvddivre 456
                 + +++++kk+a +l+  ka +f  ++  k  +     e lkk+++   +k ++ ++lk    +lr+a ++    +tG + iw l     ++ +  ++  ++   ++ a+ k d i + 
  MMETSP1325-20131115|3670_1  25 ADEQAAKKKKAKQLKDMKAAQFEVKLTGKIVEH---REALKKQKEEGDAKKKRAAQLKRKMDDLRYALEQNhkRNTGEDrIWDLHRT-LISGKSLQVddQQDYANESAEEKADRIFAR 138
                 5578999****************9999887655...567888888899999****************97541268997549999743.334333322003334455566666666665 PP

>> PF06785.6  Uncharacterised protein family (UPF0242)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.6   0.00017      0.25      59     118 ..      32      92 ..      28     157 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00017
   PF06785.6  59 grrekqlktaagqllqtkir.kltekdeGlrkiresveerqkesdqlklqnqklvnqllhv 118
                 +++ kqlk   +  ++ k+  k++e+ e l+k +e  + ++k ++qlk + + l   l + 
  MMETSP1325-20131115|3670_1  32 KKKAKQLKDMKAAQFEVKLTgKIVEHREALKKQKEEGDAKKKRAAQLKRKMDDLRYALEQN 92 
                 578899*98877777888744*******************************999888765 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   9.2     0.003       4.6      99     177 ..      15      91 ..       4      98 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.003
   PF05266.9  99 Lslkkdqtkkleerkklekeiaekeieqqeleseiaelerkilelrrkeallkekkeaed...keiarlkseasklkqeled 177
                 L lk +++  ++e+++++k++++   ++ +  +  ++l  ki+e+r+    lk++ke+ d   k+ a+lk ++++l  +le+
  MMETSP1325-20131115|3670_1  15 LVLKAEKRLHADEQAAKKKKAKQL--KDMKAAQFEVKLTGKIVEHREA---LKKQKEEGDakkKRAAQLKRKMDDLRYALEQ 91 
                 567777777777777777777777..4444455556777788888885...7777776664447888888888877766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1759  (0.128657); expected 273.4 (0.02)
Passed bias filter:                      647  (0.047323); expected 273.4 (0.02)
Passed Vit filter:                        80  (0.00585138); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.63u 0.44s 00:00:01.07 Elapsed: 00:00:00.69
# Mc/sec: 705.02
//
Query:       MMETSP1325-20131115|3672_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00078   19.1   7.1    0.00078   19.1   4.9    2.1  2  PF00643.19 B-box zinc finger
  ------ inclusion threshold ------
      0.015   15.3   3.0      0.015   15.3   2.1    3.0  3  PF12874.2  Zinc-finger of C2H2 type
      0.018   14.8   0.0      0.018   14.8   0.0    1.8  2  PF11027.3  Protein of unknown function (DUF2615)
        1.2    8.8  12.1         13    5.5   8.4    2.3  1  PF01485.16 IBR domain
        2.7    7.6   7.6       0.18   11.3   1.5    1.9  2  PF04438.11 HIT zinc finger
        5.9    6.6   8.9        4.3    7.1   1.8    2.5  2  PF10782.4  Protein of unknown function (DUF2602)


Domain annotation for each model (and alignments):
>> PF00643.19  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.3      0.29   6.7e+02       4      11 ..      57      64 ..      53      76 .. 0.77
   2 !   19.1   4.9   3.4e-07   0.00078       2      39 ..      83     123 ..      82     126 .] 0.87

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.29
  PF00643.19  4 rkCpeHee 11
                ++C++H +
  MMETSP1325-20131115|3672_1 57 TYCAKHYK 64
                57888875 PP

  == domain 2    score: 19.1 bits;  conditional E-value: 3.4e-07
  PF00643.19   2 eerkCpeHeekelqlfCedCqqllCedClleeHkg...Htv 39 
                 ++++C  +e   ++  C  C+  lC  C +++H +   H++
  MMETSP1325-20131115|3672_1  83 QAPVCVICETRVAEKRCDVCNDDLCTPCQVATHLRgkkHKH 123
                 6899*****************************66688553 PP

>> PF12874.2  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.4   5.4e+03      18      22 ..      61      65 ..      57      65 .. 0.54
   2 ?    0.4   0.1      0.34   7.7e+02       3       9 ..      87      93 ..      85      95 .. 0.80
   3 ?   15.3   2.1   6.5e-06     0.015       2      25 .]      98     121 ..      97     121 .. 0.97

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 2.4
                HHH-- CS
   PF12874.2 18 sHlqG 22
                 H+++
  MMETSP1325-20131115|3672_1 61 KHYKS 65
                35554 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.34
                ETTTTEE CS
   PF12874.2  3 CelCnvt 9 
                C +C ++
  MMETSP1325-20131115|3672_1 87 CVICETR 93
                ****875 PP

  == domain 3    score: 15.3 bits;  conditional E-value: 6.5e-06
                 EETTTTEE-SSHHHHHHHH---HH CS
   PF12874.2   2 yCelCnvtftSesqlksHlqGKkH 25 
                 +C++Cn  ++++ q  +Hl+GKkH
  MMETSP1325-20131115|3672_1  98 RCDVCNDDLCTPCQVATHLRGKKH 121
                 6*********************** PP

>> PF11027.3  Protein of unknown function (DUF2615)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   8.1e-06     0.018      19      45 ..      41      67 ..      33      98 .. 0.82
   2 ?   -1.2   0.3      0.74   1.7e+03      31      38 ..     101     108 ..      88     125 .. 0.70

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 8.1e-06
   PF11027.3 19 rrLlsllRqsqsyCtDteClqdlpgrp 45
                r+Ll+++ ++ ++CtDt C +   +  
  MMETSP1325-20131115|3672_1 41 RKLLQMIEEARDECTDTYCAKHYKSVH 67
                89*****************88766633 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.74
   PF11027.3  31 yCtDteCl 38 
                  C+D  C+
  MMETSP1325-20131115|3672_1 101 VCNDDLCT 108
                 58887774 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.4    0.0059        13      15      60 ..      48     116 ..      39     122 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0059
  PF01485.16  15 ekelkwCprpdCeaiiekekgakks.......................svtCskCgfefCflCkkewHe 60 
                 e+ +  C    C + +++ +++ ++                         +C +C+ + C+ C+ + H 
  MMETSP1325-20131115|3672_1  48 EEARDECTDTYCAKHYKSVHKKGRRathkwvgfraqapvcvicetrvaEKRCDVCNDDLCTPCQVATHL 116
                 33333777777777777777666667788**********99999999999***************9995 PP

>> PF04438.11  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.2       1.1   2.5e+03      19      24 ..      54      59 ..      52      63 .. 0.66
   2 ?   11.3   1.5   8.1e-05      0.18       1      24 [.      83     107 ..      83     109 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1.1
  PF04438.11 19 CntryC 24
                C   yC
  MMETSP1325-20131115|3672_1 54 CTDTYC 59
                666677 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 8.1e-05
  PF04438.11   1 prklCgvCgf.pakYkCpkCntryC 24 
                 ++++C++C+   a  +C  Cn  +C
  MMETSP1325-20131115|3672_1  83 QAPVCVICETrVAEKRCDVCNDDLC 107
                 5789********************9 PP

>> PF10782.4  Protein of unknown function (DUF2602)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.3     0.032        73      11      36 ..      52      74 ..      41      78 .. 0.58
   2 ?    7.1   1.8    0.0019       4.3      10      39 ..      99     125 ..      90     126 .] 0.81

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.032
   PF10782.4 11 ddLqetyCkgCllkkhfrkeegKtya 36
                d+  +tyC +   k+ +  ++g++  
  MMETSP1325-20131115|3672_1 52 DECTDTYCAKH-YKSVH--KKGRRAT 74
                56678888776.33333..3444444 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0019
   PF10782.4  10 iddLqetyCkgCllkkhfrkeegKtyahsF 39 
                  d   +  C+ C + +h+    gK+++h+F
  MMETSP1325-20131115|3672_1  99 CDVCNDDLCTPCQVATHL---RGKKHKHTF 125
                 55567889*********7...799999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       675  (0.049371); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 603.88
//
Query:       MMETSP1325-20131115|3675_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.2   0.1      0.053   13.2   0.1    1.5  1  PF00271.26 Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   3.9e-06     0.053      61      78 .]      14      31 ..       3      31 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.9e-06
                BSSHHHHHHH------TT CS
  PF00271.26 61 prsvtsyiQriGRtgRag 78
                p s +s  Qr+GR+gR g
  MMETSP1325-20131115|3675_1 14 PISQASARQRAGRAGRTG 31
                999*************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|3676_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   15.2   0.0        2.5    8.0   0.0    2.0  2  PF01241.13 Photosystem I psaG / psaK


Domain annotation for each model (and alignments):
>> PF01241.13  Photosystem I psaG / psaK
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0   0.00018       2.5      38      59 ..      14      35 ..       3      39 .. 0.79
   2 ?    5.9   0.0   0.00082        11      43      58 ..      47      62 ..      38      63 .] 0.85

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00018
                ----TTTTTSST---CCCHHHC CS
  PF01241.13 38 angesilksndpaGFnlvdvLA 59
                +n+++ ++  dp GF l++vL 
  MMETSP1325-20131115|3676_1 14 TNRDADFRNPDPRGFQLPAVLT 35
                3444779999**********96 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.00082
                TTTTSST---CCCHHH CS
  PF01241.13 43 ilksndpaGFnlvdvL 58
                +l+  dp GF l++vL
  MMETSP1325-20131115|3676_1 47 VLRNPDPRGFQLPAVL 62
                57888**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|3674_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.63
# Mc/sec: 182.58
//
Query:       MMETSP1325-20131115|3678_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.042   13.3   0.8      0.069   12.7   0.0    1.8  2  PF00612.22 IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.57   7.8e+03       6      10 ..      69      73 ..      69      78 .. 0.72
   2 ?   12.7   0.0     5e-06     0.069       3      17 ..     111     125 ..     109     128 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.57
                HHHHH CS
  PF00612.22  6 kIQaa 10
                +IQ+ 
  MMETSP1325-20131115|3678_1 69 IIQRN 73
                68985 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 5e-06
                 HHHHHHHHHHHHHHH CS
  PF00612.22   3 aaikIQaawRgylaR 17 
                 aa+ IQ+ +Rg+  R
  MMETSP1325-20131115|3678_1 111 AACNIQRLFRGFFSR 125
                 9***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      408  (0.029842); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 760.38
//
Query:       MMETSP1325-20131115|3682_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.64
# Mc/sec: 194.70
//
Query:       MMETSP1325-20131115|3685_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 606.74
//
Query:       MMETSP1325-20131115|3686_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 384.42
//
Query:       MMETSP1325-20131115|3679_1  [L=364]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-36  123.1   0.4    3.9e-35  120.7   0.1    1.9  2  PF02114.11 Phosducin
  ------ inclusion threshold ------
        1.9    9.0   8.8        1.2    9.7   4.5    1.8  2  PF13007.2  Transposase C of IS166 homeodomain


Domain annotation for each model (and alignments):
>> PF02114.11  Phosducin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.029     2e+02      77     113 ..      15      51 ..       6      70 .. 0.83
   2 !  120.7   0.1   5.7e-39   3.9e-35      19     249 ..      99     320 ..      79     329 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.029
  PF02114.11  77 lkekisrkmslkeyelidkdkddeeflrkyrkqrmde 113
                 l++k+ rk     y   dkd d+ee  ++yr + +d+
  MMETSP1325-20131115|3679_1  15 LEDKLLRKNIPGRYSHWDKDDDEEEGNKNYRAEWVDQ 51 
                 566777777777888999*************887765 PP

  == domain 2    score: 120.7 bits;  conditional E-value: 5.7e-39
  PF02114.11  19 iavntgpkgvindwrkfkqlesedreevarekkrllkklssscrshldeeeesrddkdlkekisrkmslkeyelidk..dkddeeflrkyrkqrmdemrqklskgprfkfvlelesgeqfldtidkeqkitlivvhiyedgvkgtealnssliclaaeyptvkfckvkasvigasdrfsrdvlpallvykagellsnfvrvtdqlaedffavdleaflqefgllpekevlvle 249
                 + ++tgpkgv+nd++  k++e+ +r+    +++ +l++++  +         ++    ++e +   ++  e e  +      +e+fl+ +r  r+ e+ q  s  p f+ ++e+ + e + d id+ +    +vvhiyed vk +  +n ++  la  y  vkf ++++s     + f   +lp+l vykag++ + fvr+ d ++ +f + d+e +l++ g++  ++  +l+
  MMETSP1325-20131115|3679_1  99 MGAKTGPKGVLNDYKEHKRIEAHNRQVDKMHREAVLHRMAYGAT-------AQNTLSLAQEALDAEVAKAEAEAQEEaeAEAEEDFLKSFREARIREL-QSASTQPVFGNIYEVTAHE-YADAIDRCDPRVYVVVHIYEDFVKECGRMNRCMEELARSYTNVKFVRLRSSES--PSPFDPVTLPTLCVYKAGDICNSFVRIQDTVGSNFSSDDIEWMLNQEGVFESRQSGILN 320
                 5689***********************999**********9333.......3333344455555555555555544311456799************9.678999*********8765.99*************************************************85..689*******************************************9999887776665 PP

>> PF13007.2  Transposase C of IS166 homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.3     9e+03      19      30 ..      68      78 ..      66     107 .. 0.53
   2 ?    9.7   4.5   0.00017       1.2       8      57 ..     132     179 ..     127     192 .. 0.67

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 1.3
   PF13007.2 19 SEkldarqieQl 30
                SE++ +r+i+  
  MMETSP1325-20131115|3679_1 68 SERM-DRDIADI 78
                6666.4444222 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00017
   PF13007.2   8 allkrqlFGrkSEkldarqieQleLfeeleaaaaeaeaeaeeaaaetaa..r 57 
                 a l r+ +G+    + +   +Q  L  ++e+a aeaea++e++a+++++  +
  MMETSP1325-20131115|3679_1 132 AVLHRMAYGATAQNTLSL--AQEAL--DAEVAKAEAEAQEEAEAEAEEDflK 179
                 668888899888866333..66666..7777777777777777776665653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       783  (0.0572703); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.60
# Mc/sec: 1453.79
//
Query:       MMETSP1325-20131115|3691_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|3689_1  [L=324]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-21   75.1   8.7    9.2e-09   35.0   0.0    3.3  3  PF13424.1  Tetratricopeptide repeat
    2.8e-14   51.8  14.2      0.041   13.3   0.4    6.3  6  PF00515.23 Tetratricopeptide repeat
    1.4e-13   49.3   7.8      0.022   14.4   0.0    6.6  7  PF13176.1  Tetratricopeptide repeat
    3.7e-11   42.4  10.3    0.00034   20.0   0.9    4.0  5  PF13414.1  TPR repeat
    1.8e-10   39.8  13.1      0.075   12.8   0.1    6.3  6  PF07719.12 Tetratricopeptide repeat
    1.5e-08   33.7  13.4     0.0067   16.0   0.1    6.0  6  PF13181.1  Tetratricopeptide repeat
    3.8e-05   23.7   4.3        1.9    9.0   0.0    4.5  5  PF13174.1  Tetratricopeptide repeat
    0.00011   22.4   0.9        9.7    7.0   0.0    5.3  6  PF13428.1  Tetratricopeptide repeat
    0.00027   20.5   8.5        9.5    6.1   0.1    5.7  6  PF13374.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.058   13.8   0.0        2.2    8.8   0.0    2.7  2  PF12681.2  Glyoxalase-like domain
       0.07   13.6   4.0        3.1    8.4   0.3    4.0  5  PF13432.1  Tetratricopeptide repeat
       0.08   12.9   4.9       0.77    9.8   1.8    3.0  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      0.096   12.5   0.8       0.76    9.6   0.0    2.5  3  PF08855.5  Domain of unknown function (DUF1825)
        0.2   11.4   3.3         11    5.8   0.0    3.7  3  PF13371.1  Tetratricopeptide repeat
       0.99   10.0   8.6         16    6.1   0.1    4.9  5  PF08238.7  Sel1 repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0     1e-11   9.2e-09       5      76 ..     100     170 ..      95     172 .. 0.94
   2 !   24.7   0.9   1.6e-08   1.5e-05       6      77 ..     188     258 ..     183     259 .. 0.92
   3 !   18.7   0.3   1.2e-06    0.0011      10      63 ..     272     324 .]     263     324 .] 0.93

  Alignments for each domain:
  == domain 1    score: 35.0 bits;  conditional E-value: 1e-11
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                   +++nla+ +++ +d +    +yek+le+ r++gd  ++ a a n+l+ +y+ ++d  +A++++e+ le+a
  MMETSP1325-20131115|3689_1 100 YGAYSNLAQHFQKVKDPKTGVYFYEKCLEISRLTGDKRGEMA-ANNDLGLIYQGMNDVNSAIKFHERHLELA 170
                 6789************************************66.9*************************997 PP

  == domain 2    score: 24.7 bits;  conditional E-value: 1.6e-08
   PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77 
                 +++   a++ +   d++eA ++y+k+le +r++ +   +  +a + l+++y  +++   A+ +le+  +i++
  MMETSP1325-20131115|3689_1 188 KVYKKVAGTKEGANDHEEAVQYYQKCLEAARLAQEKRSE-GMACYRLGRAYIMMEEPLRAISFLEDYEAICK 258
                 67888999999**********************998877.99************************999987 PP

  == domain 3    score: 18.7 bits;  conditional E-value: 1.2e-06
   PF13424.1  10 nlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdyd 63 
                  +a ++++l + ++A e++ k+l +++e+ +  ++   a   l+ +++++g+yd
  MMETSP1325-20131115|3689_1 272 AIASAYQMLTNDEKAVEYLDKCLSIASETENLMAQ-GEANCALGVIHNKRGQYD 324
                 69************************999988776.****************97 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00015      0.14       3      30 ..     102     129 ..     100     131 .. 0.96
   2 !   12.5   0.0   8.2e-05     0.075       5      30 ..     144     169 ..     141     171 .. 0.93
   3 !   13.3   0.4   4.5e-05     0.041      15      29 ..     201     215 ..     198     218 .. 0.91
   4 !    5.9   0.0    0.0097       8.9       3      23 ..     229     249 ..     228     252 .. 0.87
   5 !    8.8   0.2    0.0012       1.1       3      31 ..     269     297 ..     267     299 .. 0.87
   6 ?    4.6   0.0     0.026        24       3      18 ..     309     324 .]     307     324 .] 0.88

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00015
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekALel 30 
                 a+ nl++ ++k ++++  + +yek+Le+
  MMETSP1325-20131115|3689_1 102 AYSNLAQHFQKVKDPKTGVYFYEKCLEI 129
                 8**************************9 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 8.2e-05
                 HHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALel 30 
                 + lG++y+ +++ + A+++ e+ Lel
  MMETSP1325-20131115|3689_1 144 NDLGLIYQGMNDVNSAIKFHERHLEL 169
                 789*********************99 PP

  == domain 3    score: 13.3 bits;  conditional E-value: 4.5e-05
                 T-HHHHHHHHHHHHH CS
  PF00515.23  15 gkydeAleyyekALe 29 
                 ++++eA++yy+k+Le
  MMETSP1325-20131115|3689_1 201 NDHEEAVQYYQKCLE 215
                 79************9 PP

  == domain 4    score: 5.9 bits;  conditional E-value: 0.0097
                 HHHHHHHHHHHTT-HHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAley 23 
                 a+y+lG ay  ++++  A+ +
  MMETSP1325-20131115|3689_1 229 ACYRLGRAYIMMEEPLRAISF 249
                 89***********99888866 PP

  == domain 5    score: 8.8 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekALeln 31 
                 a+  ++ ay+ l + ++A+ey +k+L++ 
  MMETSP1325-20131115|3689_1 269 ACAAIASAYQMLTNDEKAVEYLDKCLSIA 297
                 666789999999999***********986 PP

  == domain 6    score: 4.6 bits;  conditional E-value: 0.026
                 HHHHHHHHHHHTT-HH CS
  PF00515.23   3 alynlGnaylklgkyd 18 
                 a + lG+++ k g+yd
  MMETSP1325-20131115|3689_1 309 ANCALGVIHNKRGQYD 324
                 5588***********8 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.079        72       1      34 [.     102     135 ..     102     137 .. 0.83
   2 !   14.4   0.0   2.4e-05     0.022       3      33 ..     144     174 ..     142     177 .. 0.89
   3 ?   -1.9   0.0       3.9   3.6e+03      17      24 ..     185     192 ..     184     199 .. 0.78
   4 !   13.3   0.4   5.5e-05      0.05      12      34 ..     200     223 ..     189     225 .. 0.81
   5 ?   -0.6   0.0       1.5   1.4e+03       1      10 [.     229     238 ..     229     252 .. 0.72
   6 !   12.0   0.2   0.00014      0.13       1      33 [.     269     301 ..     269     303 .. 0.91
   7 ?    4.0   0.0      0.05        46       3      16 ..     311     324 .]     309     324 .] 0.91

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.079
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdpld 34 
                 a++nLa+ ++++ d ++ + +ye++L++ +  +d
  MMETSP1325-20131115|3689_1 102 AYSNLAQHFQKVKDPKTGVYFYEKCLEISRLTGD 135
                 799*******999999999999998888776666 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.4e-05
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltkdpl 33 
                 + L+ +y+ ++d   Ai+++er+L+l+ d +
  MMETSP1325-20131115|3689_1 144 NDLGLIYQGMNDVNSAIKFHERHLELATDGE 174
                 5699**********************99876 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 3.9
   PF13176.1  17 kAielyer 24 
                 ++i++y++
  MMETSP1325-20131115|3689_1 185 ELIKVYKK 192
                 899***99 PP

  == domain 4    score: 13.3 bits;  conditional E-value: 5.5e-05
   PF13176.1  12 lgdyekAielyeraL.altkdpld 34 
                  +d+e+A+++y+++L a + ++++
  MMETSP1325-20131115|3689_1 200 ANDHEEAVQYYQKCLeAARLAQEK 223
                 69*************777776665 PP

  == domain 5    score: -0.6 bits;  conditional E-value: 1.5
   PF13176.1   1 allnLarlys 10 
                 a+++L+r+y 
  MMETSP1325-20131115|3689_1 229 ACYRLGRAYI 238
                 7899999995 PP

  == domain 6    score: 12.0 bits;  conditional E-value: 0.00014
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdpl 33 
                 a+ ++a++y+ l + ekA+e++ ++L ++++ +
  MMETSP1325-20131115|3689_1 269 ACAAIASAYQMLTNDEKAVEYLDKCLSIASETE 301
                 7899********************999988765 PP

  == domain 7    score: 4.0 bits;  conditional E-value: 0.05
   PF13176.1   3 lnLarlysrlgdye 16 
                 ++L++++ ++g+y+
  MMETSP1325-20131115|3689_1 311 CALGVIHNKRGQYD 324
                 89**********97 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0     0.004       3.6      39      68 ..     102     130 ..      86     136 .. 0.84
   2 !   14.4   0.0   2.1e-05     0.019       5      67 ..     102     169 ..      99     171 .. 0.86
   3 !   20.0   0.9   3.7e-07   0.00034       5      62 ..     189     251 ..     185     258 .. 0.76
   4 !   10.9   0.1   0.00027      0.25      41      68 ..     271     297 ..     264     298 .. 0.87
   5 ?   -1.1   0.0       1.5   1.4e+03       8      20 ..     312     324 .]     305     324 .] 0.72

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.004
   PF13414.1  39 lyynlAlaylklgkdyeeAledyekAleld 68 
                 +y+nlA+ ++k   d++  +  yek+le++
  MMETSP1325-20131115|3689_1 102 AYSNLAQHFQKVK-DPKTGVYFYEKCLEIS 130
                 8999999999985.7999999999999986 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.1e-05
   PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnae......lyynlAlaylklgkdyeeAledyekAlel 67 
                 a+ +l++ + k +d++  + +yek+le++  + +      + + l+l+y+ ++ d  +A++  e+ lel
  MMETSP1325-20131115|3689_1 102 AYSNLAQHFQKVKDPKTGVYFYEKCLEISRLTGDkrgemaANNDLGLIYQGMN-DVNSAIKFHERHLEL 169
                 6899************************8666555666767777********8.689****99998887 PP

  == domain 3    score: 20.0 bits;  conditional E-value: 3.7e-07
   PF13414.1   5 alkelGnalfkegdydeAieayekAleld......pnnaelyynlAlaylklgkdyeeAledye 62 
                 ++k  +     ++d++eA+++y+k+le         +   + y+l+ ay+++  ++ +A+  +e
  MMETSP1325-20131115|3689_1 189 VYKKVAGTKEGANDHEEAVQYYQKCLEAArlaqekRSEGMACYRLGRAYIMME-EPLRAISFLE 251
                 6666777777899*************98533333244566************7.6999987665 PP

  == domain 4    score: 10.9 bits;  conditional E-value: 0.00027
   PF13414.1  41 ynlAlaylklgkdyeeAledyekAleld 68 
                 +++A ay++l + +e+A+e+++k+l+++
  MMETSP1325-20131115|3689_1 271 AAIASAYQMLTN-DEKAVEYLDKCLSIA 297
                 67899*****95.6***********986 PP

  == domain 5    score: -1.1 bits;  conditional E-value: 1.5
   PF13414.1   8 elGnalfkegdyd 20 
                 +lG  + k+g+yd
  MMETSP1325-20131115|3689_1 312 ALGVIHNKRGQYD 324
                 5777788888876 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.022        20       3      30 ..     102     129 ..     100     131 .. 0.94
   2 !    6.6   0.0    0.0083       7.6       3      30 ..     142     169 ..     141     172 .. 0.86
   3 !   10.2   0.2   0.00057      0.52      14      30 ..     200     216 ..     196     218 .. 0.89
   4 !    8.1   0.0    0.0027       2.5       3      25 ..     229     251 ..     227     259 .. 0.89
   5 !   12.8   0.1   8.2e-05     0.075       3      31 ..     269     297 ..     267     299 .. 0.91
   6 ?   -0.0   0.0       1.1   9.8e+02       2      18 ..     308     324 .]     307     324 .] 0.89

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAlel 30 
                 a+ nl++   k +d++  + ++ek+le+
  MMETSP1325-20131115|3689_1 102 AYSNLAQHFQKVKDPKTGVYFYEKCLEI 129
                 899***********************98 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0083
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAlel 30 
                 a++ lGl+y  ++d + A+++ e+ lel
  MMETSP1325-20131115|3689_1 142 ANNDLGLIYQGMNDVNSAIKFHERHLEL 169
                 7899****************98886665 PP

  == domain 3    score: 10.2 bits;  conditional E-value: 0.00057
                 TT-HHHHHHHHHHHHHH CS
  PF07719.12  14 lgdyeeAleafekAlel 30 
                 ++d+eeA+++++k+le 
  MMETSP1325-20131115|3689_1 200 ANDHEEAVQYYQKCLEA 216
                 589************96 PP

  == domain 4    score: 8.1 bits;  conditional E-value: 0.0027
                 HHHHHHHHHHHTT-HHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafe 25 
                 a+y+lG+ay+ + ++ +A+ ++e
  MMETSP1325-20131115|3689_1 229 ACYRLGRAYIMMEEPLRAISFLE 251
                 89*************99998876 PP

  == domain 5    score: 12.8 bits;  conditional E-value: 8.2e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleld 31 
                 a+ +++ ay  l + e+A+e+++k+l+++
  MMETSP1325-20131115|3689_1 269 ACAAIASAYQMLTNDEKAVEYLDKCLSIA 297
                 78899*********************986 PP

  == domain 6    score: -0.0 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHTT-HH CS
  PF07719.12   2 ealynlGlayyklgdye 18 
                 ea+++lG ++ k+g+y+
  MMETSP1325-20131115|3689_1 308 EANCALGVIHNKRGQYD 324
                 78999****99999997 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0       0.1        96      23      32 ..     122     131 ..     100     133 .. 0.77
   2 ?    3.0   0.0       0.1        95       3      23 ..     142     162 ..     140     170 .. 0.86
   3 !   12.1   0.2   0.00013      0.12      15      32 ..     201     218 ..     197     221 .. 0.89
   4 ?    3.6   0.0     0.065        59       3      25 ..     229     251 ..     229     256 .. 0.87
   5 !   16.0   0.1   7.3e-06    0.0067       2      31 ..     268     297 ..     267     301 .. 0.92
   6 ?   -0.4   0.0       1.3   1.2e+03       3      18 ..     309     324 .]     307     324 .] 0.88

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.1
                 HHH---HHHH CS
   PF13181.1  23 ylekalelkp 32 
                 ++ek+le+++
  MMETSP1325-20131115|3689_1 122 FYEKCLEISR 131
                 8*******97 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.1
                 -TTT---HHHHTT-HHHHHHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkey 23 
                 a + lG+iY  ++d  +A+++
  MMETSP1325-20131115|3689_1 142 ANNDLGLIYQGMNDVNSAIKF 162
                 56779************9986 PP

  == domain 3    score: 12.1 bits;  conditional E-value: 0.00013
                 T-HHHHHHHHH---HHHH CS
   PF13181.1  15 GdydkAkeylekalelkp 32 
                 +d+++A +y++k+le ++
  MMETSP1325-20131115|3689_1 201 NDHEEAVQYYQKCLEAAR 218
                 799************886 PP

  == domain 4    score: 3.6 bits;  conditional E-value: 0.065
                 -TTT---HHHHTT-HHHHHHHHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeyle 25 
                 a+y+lG++Y  + +   A+++le
  MMETSP1325-20131115|3689_1 229 ACYRLGRAYIMMEEPLRAISFLE 251
                 69********9999888888887 PP

  == domain 5    score: 16.0 bits;  conditional E-value: 7.3e-06
                 --TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelk 31 
                 +a+ +++++Y  l + +kA eyl k+l+++
  MMETSP1325-20131115|3689_1 268 QACAAIASAYQMLTNDEKAVEYLDKCLSIA 297
                 58999***********************97 PP

  == domain 6    score: -0.4 bits;  conditional E-value: 1.3
                 -TTT---HHHHTT-HH CS
   PF13181.1   3 ayynlGdiYrqlGdyd 18 
                 a ++lG i+ + G+yd
  MMETSP1325-20131115|3689_1 309 ANCALGVIHNKRGQYD 324
                 67899**********8 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       5.3   4.9e+03       7      19 ..      87      99 ..      81     113 .. 0.62
   2 ?   -2.6   0.0       9.9     9e+03       6      21 ..     146     161 ..     146     162 .. 0.81
   3 !    7.9   0.0    0.0045       4.1      13      28 ..     200     215 ..     185     217 .. 0.82
   4 ?    4.8   0.0     0.044        40       4      25 ..     231     252 ..     229     256 .. 0.88
   5 !    9.0   0.0    0.0021       1.9       6      27 ..     273     294 ..     272     299 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 5.3
                HHHHHHHHHHHHH CS
   PF13174.1  7 alsyyklgdtdeA 19
                a+  +++gdt+  
  MMETSP1325-20131115|3689_1 87 AENARRQGDTTTV 99
                4455666676654 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 9.9
                 HHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAle 21 
                 l+l+y+ ++d   A++
  MMETSP1325-20131115|3689_1 146 LGLIYQGMNDVNSAIK 161
                 7899999889888876 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.0045
                 HHHHHHHHHHHHHHHH CS
   PF13174.1  13 lgdtdeAlealerlik 28 
                 ++d++eA+++++++++
  MMETSP1325-20131115|3689_1 200 ANDHEEAVQYYQKCLE 215
                 479**********987 PP

  == domain 4    score: 4.8 bits;  conditional E-value: 0.044
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyklgdtdeAlealer 25 
                 y+l+++y+++ ++ +A+  le+
  MMETSP1325-20131115|3689_1 231 YRLGRAYIMMEEPLRAISFLED 252
                 9********8788899998886 PP

  == domain 5    score: 9.0 bits;  conditional E-value: 0.0021
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerli 27 
                 +a +y++l++ ++A+e+l++++
  MMETSP1325-20131115|3689_1 273 IASAYQMLTNDEKAVEYLDKCL 294
                 689999999**********987 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       3.7   3.4e+03       8      30 ..      87     109 ..      82     121 .. 0.63
   2 ?   -0.2   0.0       2.2     2e+03       3      29 ..     102     128 ..     100     133 .. 0.85
   3 ?    0.6   0.0       1.2   1.1e+03       3      31 ..     142     170 ..     140     176 .. 0.84
   4 ?    7.0   0.0     0.011       9.7      11      31 ..     197     217 ..     188     224 .. 0.80
   5 ?    4.8   0.0     0.055        50       5      32 ..     231     258 ..     228     265 .. 0.87
   6 ?    2.1   0.0      0.39   3.6e+02      10      33 ..     276     299 ..     268     324 .] 0.76

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 3.7
   PF13428.1   8 arallalGdpdeAiallrralal 30 
                 a+  +++Gd+     ++  ++++
  MMETSP1325-20131115|3689_1  87 AENARRQGDTTTVYGAYSNLAQH 109
                 56667777766666555555544 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 2.2
   PF13428.1   3 allalarallalGdpdeAiallrrala 29 
                 a+  la+ +    dp+ ++  +++ l+
  MMETSP1325-20131115|3689_1 102 AYSNLAQHFQKVKDPKTGVYFYEKCLE 128
                 788999999999999999988888876 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 1.2
   PF13428.1   3 allalarallalGdpdeAiallrralala 31 
                 a  +l+ ++  ++d+  Ai+  +r l+la
  MMETSP1325-20131115|3689_1 142 ANNDLGLIYQGMNDVNSAIKFHERHLELA 170
                 66789999***********9999988765 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.011
   PF13428.1  11 llalGdpdeAiallrralala 31 
                  + ++d++eA++++++ l++a
  MMETSP1325-20131115|3689_1 197 KEGANDHEEAVQYYQKCLEAA 217
                 56689************9976 PP

  == domain 5    score: 4.8 bits;  conditional E-value: 0.055
   PF13428.1   5 lalarallalGdpdeAiallrralalaP 32 
                 ++l+ra++ +++p +Ai  l+++ a + 
  MMETSP1325-20131115|3689_1 231 YRLGRAYIMMEEPLRAISFLEDYEAICK 258
                 79*******************9988765 PP

  == domain 6    score: 2.1 bits;  conditional E-value: 0.39
   PF13428.1  10 allalGdpdeAiallrralalaPd 33 
                 a+  l + ++A+++l++ l+ a +
  MMETSP1325-20131115|3689_1 276 AYQMLTNDEKAVEYLDKCLSIASE 299
                 5555556789******99987644 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       9.1   8.3e+03      22      29 ..      27      34 ..      19      35 .. 0.59
   2 ?    6.0   0.0     0.012        10       4      34 ..     102     132 ..      99     136 .. 0.91
   3 ?    6.1   0.1      0.01       9.5       3      27 ..     141     165 ..     140     170 .. 0.89
   4 ?    5.2   0.4      0.02        18      16      33 ..     201     218 ..     198     222 .. 0.89
   5 ?    2.1   0.0      0.19   1.7e+02       4      31 ..     269     296 ..     268     300 .. 0.86
   6 ?    0.0   0.0      0.88     8e+02       8      19 ..     313     324 .]     312     324 .] 0.92

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 9.1
   PF13374.1 22 laleeeal 29
                ++l ee+l
  MMETSP1325-20131115|3689_1 27 RRLCEEIL 34
                45555555 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.012
   PF13374.1   4 alnnLAlalrargryeeAlaleeealairrr 34 
                 a++nLA  +++ ++    + ++e++l+i r 
  MMETSP1325-20131115|3689_1 102 AYSNLAQHFQKVKDPKTGVYFYEKCLEISRL 132
                 89**************************986 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.01
   PF13374.1   3 aalnnLAlalrargryeeAlaleee 27 
                 aa n+L+l+++ +++ + A +++e+
  MMETSP1325-20131115|3689_1 141 AANNDLGLIYQGMNDVNSAIKFHER 165
                 6779***************999986 PP

  == domain 4    score: 5.2 bits;  conditional E-value: 0.02
   PF13374.1  16 gryeeAlaleeealairr 33 
                 +++eeA+++++++l+  r
  MMETSP1325-20131115|3689_1 201 NDHEEAVQYYQKCLEAAR 218
                 799***********9876 PP

  == domain 5    score: 2.1 bits;  conditional E-value: 0.19
   PF13374.1   4 alnnLAlalrargryeeAlaleeealai 31 
                 a+  +A a++ + + e+A++++ ++l+i
  MMETSP1325-20131115|3689_1 269 ACAAIASAYQMLTNDEKAVEYLDKCLSI 296
                 566789999999899**********998 PP

  == domain 6    score: 0.0 bits;  conditional E-value: 0.88
   PF13374.1   8 LAlalrargrye 19 
                 L++++++rg+y+
  MMETSP1325-20131115|3689_1 313 LGVIHNKRGQYD 324
                 999*******97 PP

>> PF12681.2  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.29   2.6e+02       3      24 ..     113     136 ..     111     182 .. 0.63
   2 ?    8.8   0.0    0.0024       2.2       3      39 ..     200     247 ..     199     302 .. 0.73

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.29
   PF12681.2   3 vsdleaaraFYeklLGfevae..e 24 
                 v+d++  + FYek L  +     +
  MMETSP1325-20131115|3689_1 113 VKDPKTGVYFYEKCLEISRLTgdK 136
                 888899999999998876555332 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0024
   PF12681.2   3 vsdleaaraFYeklLGfevae...eegdfvtlslglalg........s 39 
                 ++d e+a+++Y+k L         +++++++++lg a+          
  MMETSP1325-20131115|3689_1 200 ANDHEEAVQYYQKCLEAARLAqekRSEGMACYRLGRAYImmeeplraI 247
                 5899***********87766667789999*****95554444444330 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       8.9   8.1e+03       2      12 ..      85      95 ..      84      97 .. 0.71
   2 ?    3.1   0.0      0.16   1.5e+02      30      61 ..     139     170 ..     128     174 .. 0.84
   3 ?    8.4   0.3    0.0034       3.1      10      57 ..     200     253 ..     194     260 .. 0.86
   4 ?   -2.4   0.0       8.3   7.6e+03      38      61 ..     274     297 ..     269     301 .. 0.70
   5 ?   -1.5   0.0       4.4     4e+03      36      48 ..     312     324 .]     307     324 .] 0.87

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 8.9
   PF13432.1  2 alArallraGd 12
                 +A+++ r+Gd
  MMETSP1325-20131115|3689_1 85 TQAENARRQGD 95
                57888888887 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.16
   PF13432.1  30 aaeallllaeallrlgrldeAaallraalala 61 
                    a   l+ ++  ++++  A+++ +++l+la
  MMETSP1325-20131115|3689_1 139 EMAANNDLGLIYQGMNDVNSAIKFHERHLELA 170
                 6679999*****************99999776 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0034
   PF13432.1  10 aGdydeAlaaleaalala......PeaaeallllaeallrlgrldeAaallraa 57 
                 a+d +eA++++++ l++a           a ++l++a+ ++ ++ +A+ +l+ +
  MMETSP1325-20131115|3689_1 200 ANDHEEAVQYYQKCLEAArlaqekRSEGMACYRLGRAYIMMEEPLRAISFLEDY 253
                 788999999999999999777666669*********************999987 PP

  == domain 4    score: -2.4 bits;  conditional E-value: 8.3
   PF13432.1  38 aeallrlgrldeAaallraalala 61 
                 a a+ +l + ++A+++l++ l++a
  MMETSP1325-20131115|3689_1 274 ASAYQMLTNDEKAVEYLDKCLSIA 297
                 556666677788888888777655 PP

  == domain 5    score: -1.5 bits;  conditional E-value: 4.4
   PF13432.1  36 llaeallrlgrld 48 
                 +l++++ ++g++d
  MMETSP1325-20131115|3689_1 312 ALGVIHNKRGQYD 324
                 699********97 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0       0.3   2.7e+02      25      52 ..     140     170 ..     112     194 .. 0.59
   2 ?    9.8   1.8   0.00085      0.77       3      52 ..     201     262 ..     199     293 .. 0.66
   3 ?   -1.5   0.0       2.7   2.5e+03       6      29 ..     284     306 ..     279     314 .. 0.65

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.3
                 HHCHHHHHHHHHH---HHHHHHHHHC...TS CS
   PF12895.2  25 daylyalAlclylngeykrAyellrk...le 52 
                  a+   l+l ++ +++ ++A+++ ++   l 
  MMETSP1325-20131115|3689_1 140 MAANNDLGLIYQGMNDVNSAIKFHERhleLA 170
                 3333346889999999999999987764433 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00085
                 T-HHHHHHHHHHHCCC-ST...-H.HHHCHHHHHHHHHH---HHHHHHHHHC........TS CS
   PF12895.2   3 hnyknAlflaekllaespk...dp.edaylyalAlclylngeykrAyellrk........le 52 
                 +++++A+ +++k l+ +     ++ e  + y+l+ ++  ++e+ rA+ +l++         +
  MMETSP1325-20131115|3689_1 201 NDHEEAVQYYQKCLEAARLaqeKRsEGMACYRLGRAYIMMEEPLRAISFLEDyeaickelRD 262
                 678899999999998875444322355599999*****************886655533333 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 2.7
                 HHHHHHHHHHCCC-ST-HHHHCHH CS
   PF12895.2   6 knAlflaekllaespkdpedayly 29 
                 ++A+ +++k l+ +++ +e+ ++ 
  MMETSP1325-20131115|3689_1 284 EKAVEYLDKCLSIASE-TENLMAQ 306
                 6788888888888763.2555444 PP

>> PF08855.5  Domain of unknown function (DUF1825)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         4   3.7e+03      14      46 ..      96     126 ..      91     129 .. 0.55
   2 ?   -0.2   0.0      0.93   8.5e+02      14      48 ..     183     215 ..     179     222 .. 0.78
   3 ?    9.6   0.0   0.00083      0.76       7      50 ..     253     297 ..     248     306 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 4
   PF08855.5  14 lkelfedyqelmklgseygkldreekkeyiekl 46 
                   +++  y +l+++ ++++  d+ + + + ek+
  MMETSP1325-20131115|3689_1  96 TTTVYGAYSNLAQHFQKVK--DPKTGVYFYEKC 126
                 5556666666666655443..445555555555 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.93
   PF08855.5  14 lkelfedyqelmklgseygkldreekkeyieklee 48 
                 +kel + y++++  g++ g+ d+ee ++y +k+ e
  MMETSP1325-20131115|3689_1 183 AKELIKVYKKVA--GTKEGANDHEEAVQYYQKCLE 215
                 677777777776..556688899999999999865 PP

  == domain 3    score: 9.6 bits;  conditional E-value: 0.00083
   PF08855.5   7 Seivqeelkelfedyqelmklgseygkldreek.keyiekleeLl 50 
                  e + +el++l  + q ++  +s y+ l  +ek +ey++k+ ++ 
  MMETSP1325-20131115|3689_1 253 YEAICKELRDLEGEGQACAAIASAYQMLTNDEKaVEYLDKCLSIA 297
                 588999*********************998887479****98875 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.012        11      34      61 ..     145     172 ..     131     183 .. 0.89
   2 ?    1.8   1.2      0.22     2e+02      30      44 ..     221     235 ..     198     278 .. 0.59
   3 ?   -0.4   0.0       1.1   9.8e+02      37      59 ..     275     297 ..     272     306 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.012
   PF13371.1  34 DrGlllaqlgclaaAaedLeaflelcpd 61 
                 D Gl+++ ++++  A++  e+ lel+ d
  MMETSP1325-20131115|3689_1 145 DLGLIYQGMNDVNSAIKFHERHLELATD 172
                 99**************999999988875 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.22
   PF13371.1  30 yerRDrGlllaqlgc 44 
                 +e R  G++ ++lg+
  MMETSP1325-20131115|3689_1 221 QEKRSEGMACYRLGR 235
                 455555555555544 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 1.1
   PF13371.1  37 lllaqlgclaaAaedLeaflelc 59 
                  +++ l + + A+e L+ +l  +
  MMETSP1325-20131115|3689_1 275 SAYQMLTNDEKAVEYLDKCLSIA 297
                 67888888899999999988554 PP

>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       2.7   2.5e+03      20      33 ..     113     125 ..     102     126 .. 0.68
   2 ?   -0.2   0.0       1.7   1.5e+03       3      29 ..     142     161 ..     141     165 .. 0.71
   3 ?    6.1   0.1     0.018        16      22      33 ..     200     212 ..     190     216 .. 0.78
   4 ?    2.8   0.2       0.2   1.8e+02       2      11 ..     228     237 ..     227     244 .. 0.73
   5 ?    0.9   0.0      0.79   7.2e+02      23      32 ..     282     291 ..     268     292 .. 0.74

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 2.7
   PF08238.7  20 vpkdpekAleWyek 33 
                 v+ dp+ +++ yek
  MMETSP1325-20131115|3689_1 113 VK-DPKTGVYFYEK 125
                 44.88899999998 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 1.7
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAle 29 
                 A + LGl+y    G      d + A++
  MMETSP1325-20131115|3689_1 142 ANNDLGLIY---QGM--N--DVNSAIK 161
                 77899*999...886..5..6666666 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.018
   PF08238.7  22 k.dpekAleWyek 33 
                 + d+e+A+++y+k
  MMETSP1325-20131115|3689_1 200 AnDHEEAVQYYQK 212
                 238*********8 PP

  == domain 4    score: 2.8 bits;  conditional E-value: 0.2
   PF08238.7   2 eAqynLGlyy 11 
                  A+y+LG+ y
  MMETSP1325-20131115|3689_1 228 MACYRLGRAY 237
                 59*****444 PP

  == domain 5    score: 0.9 bits;  conditional E-value: 0.79
   PF08238.7  23 dpekAleWye 32 
                 ++ekA+e++ 
  MMETSP1325-20131115|3689_1 282 NDEKAVEYLD 291
                 899*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       583  (0.0426419); expected 273.4 (0.02)
Passed bias filter:                      456  (0.0333528); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.72u 0.39s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1362.14
//
Query:       MMETSP1325-20131115|3693_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0088   16.1   2.9       0.01   15.8   2.0    1.1  1  PF14000.1  DNA packaging protein FI
  ------ inclusion threshold ------
      0.036   11.8  13.5      0.036   11.8   9.3    1.0  1  PF04147.7  Nop14-like family
      0.079   12.9   4.4      0.081   12.8   3.0    1.1  1  PF09805.4  Nucleolar protein 12 (25kDa)
       0.16    9.8   8.5       0.17    9.7   5.9    1.1  1  PF02724.9  CDC45-like protein
       0.44    8.2   5.2       0.43    8.2   3.6    1.1  1  PF05642.6  Sporozoite P67 surface antigen
       0.59    8.0   9.1       0.63    7.9   6.3    1.0  1  PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
       0.62    8.2   4.5       0.62    8.2   3.1    1.0  1  PF00183.13 Hsp90 protein
       0.75    8.6   3.5       0.73    8.6   2.4    1.0  1  PF10846.3  Protein of unknown function (DUF2722)
       0.96    7.3   3.5       0.96    7.3   2.4    1.0  1  PF05470.7  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
        1.7    7.8   7.8          2    7.6   5.4    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
        2.3    7.6  14.0        2.9    7.3   9.7    1.2  1  PF04546.8  Sigma-70, non-essential region
        4.2    6.4  13.4        4.9    6.2   9.3    1.1  1  PF05432.6  Bone sialoprotein II (BSP-II)
        8.3    5.4  18.4        8.9    5.3  12.7    1.0  1  PF00865.13 Osteopontin
        9.1    5.6   7.6         11    5.3   5.3    1.1  1  PF03286.9  Pox virus Ag35 surface protein


Domain annotation for each model (and alignments):
>> PF14000.1  DNA packaging protein FI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   2.0   1.1e-05      0.01      37      95 ..      13      69 ..       8      84 .. 0.65

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.1e-05
   PF14000.1 37 EeEldqvaeedtassdekaltssedeavseqgevvtqaegelvtvrvlatlhldaldae 95
                EeE+d+ +e++++++d+ ++++++d++  e++++  ++++ lv v+++a  h + l+a+
  MMETSP1325-20131115|3693_1 13 EEEADDGDEDQDEDEDD-GEDEDDDDDGCEDEDADASNSSRLVCVVARA-WHACMLCAT 69
                9****666655555555.6666666666666666777777777777765.455554443 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   9.3   3.7e-05     0.036     346     387 ..       9      50 ..       3      76 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.7e-05
   PF04147.7 346 ededeeeddddeeeeeedvdedeeeedeedeesddeeeeeee 387
                 e++deee dd +e+++ed+d+ e+e+d++d+ +d++ +++++
  MMETSP1325-20131115|3693_1   9 ENDDEEEADDGDEDQDEDEDDGEDEDDDDDGCEDEDADASNS 50 
                 333444444444434444444444444444444444444433 PP

>> PF09805.4  Nucleolar protein 12 (25kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   3.0   8.3e-05     0.081      82     124 ..       9      49 ..       3      77 .. 0.59

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 8.3e-05
   PF09805.4  82 eeddeeeeeeekeeeeeedewegfnedeeeeeteeeedsdedk 124
                 e+ddeee+++++e+++e++  +g + ++++++  e+ed d+++
  MMETSP1325-20131115|3693_1   9 ENDDEEEADDGDEDQDEDE-DDGED-EDDDDDGCEDEDADASN 49 
                 3444444444444333333.56666.34444444444444444 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   5.9   0.00017      0.17     130     176 ..      10      47 ..       3      73 .. 0.46

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00017
   PF02724.9 130 eeeeesdedsdseddeeeeessasekrksesdedeeddddeededee 176
                 +++ee+++d+d+++de+e         ++ +ded++dd  e+++ ++
  MMETSP1325-20131115|3693_1  10 NDDEEEADDGDEDQDEDE---------DDGEDEDDDDDGCEDEDADA 47 
                 111222222222222222.........22222222222222222222 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.6   0.00044      0.43     101     132 ..       9      40 ..       3      79 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00044
   PF05642.6 101 sdteineddkGskedseedddeeeeednksts 132
                 ++ + +e d+G+++++e++dd e+e+d++   
  MMETSP1325-20131115|3693_1   9 ENDDEEEADDGDEDQDEDEDDGEDEDDDDDGC 40 
                 45555555555544333333333333332222 PP

>> PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   6.3   0.00064      0.63     220     264 ..       5      48 ..       4      78 .. 0.56

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00064
   PF05327.6 220 velddlddeeeeellaeeeeeeeeelfdlddddseeesvesedee 264
                 + l+++ddeee +  +e+++e+e++ +d dddd + ++ e+ d +
  MMETSP1325-20131115|3693_1   5 WALEENDDEEEADDGDEDQDEDEDDGEDEDDDD-DGCEDEDADAS 48 
                 678899777665554444444343333333333.22222222222 PP

>> PF00183.13  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.1   0.00063      0.62      35      69 ..       9      42 ..       3      76 .. 0.47

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00063
                ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX. CS
  PF00183.13 35 vpdeeeeeekeekeeeeekeeeekkeeeeeeeeee 69
                  d+eee+++ +++++e++++ +++e+++++  e+
  MMETSP1325-20131115|3693_1  9 ENDDEEEADDGDEDQDEDEDD-GEDEDDDDDGCED 42
                333333332222222222222.1222222221111 PP

>> PF10846.3  Protein of unknown function (DUF2722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.4   0.00075      0.73     355     392 ..      10      51 ..       3      81 .. 0.52

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00075
   PF10846.3 355 eddddddddekerkkeeeedkekdsikdd.......ddkdlseds 392
                 +dd+++ dd +e++ e+e+d e+   +dd       +d+d s++s
  MMETSP1325-20131115|3693_1  10 NDDEEEADDGDEDQDEDEDDGED---EDDdddgcedEDADASNSS 51 
                 22222222223333333333222...2330012211444444444 PP

>> PF05470.7  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   2.4   0.00099      0.96     134     175 ..      11      51 ..       6      77 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00099
   PF05470.7 134 dPeseeeeeeedededdegedeedeeedsvkkteevkksses 175
                 d e+e+++ +ed+ded+++ ++ed+++d+  + e  ++s++s
  MMETSP1325-20131115|3693_1  11 DDEEEADDGDEDQDEDEDDGEDEDDDDDGC-EDEDADASNSS 51 
                 334444555555555555555554444433.33444444444 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.4     0.002         2      74     116 ..      11      45 ..       3      63 .. 0.34

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.002
   PF07423.6  74 kdedkeddsesekkdeeseeeeeeekekkeeeseedeketeek 116
                 +de+++dd++++++++e + e        +e++++d  e e+ 
  MMETSP1325-20131115|3693_1  11 DDEEEADDGDEDQDEDEDDGE--------DEDDDDDGCEDEDA 45 
                 111111111111111111111........11111111111111 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   9.7    0.0029       2.9      39      71 ..      11      45 ..       2      63 .. 0.37

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0029
   PF04546.8 39 eeaeeeseddeeeeeddddddededeee...eseea 71
                +++ee+++ de+++ed +dd eded+++   e+e+a
  MMETSP1325-20131115|3693_1 11 DDEEEADDGDEDQDED-EDDGEDEDDDDdgcEDEDA 45
                2122222222222222.1111111111123322222 PP

>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   9.3     0.005       4.9      48      91 ..      10      50 ..       5      63 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.005
   PF05432.6 48 sdsseenGdGdsseeeeeeetsneeennedsdenedeeaeaenl 91
                 d  ee  dGd++++e+e++    e++++d d+ ede+a+a n 
  MMETSP1325-20131115|3693_1 10 NDDEEEADDGDEDQDEDEDD---GEDEDDDDDGCEDEDADASNS 50
                57789999999999888888...556677888999999998875 PP

>> PF00865.13  Osteopontin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  12.7    0.0091       8.9      60     105 ..      10      51 ..       2      68 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0091
  PF00865.13  60 neshdhvDDddddddddhvdsrdvdsnesddadhtdddksdeshhs 105
                 n+ +++ DD d+d+d+d  d +d    e dd+d  +d+ +d s+ s
  MMETSP1325-20131115|3693_1  10 NDDEEEADDGDEDQDEDEDDGED----EDDDDDGCEDEDADASNSS 51 
                 44555556666555554444444....4455555566666666554 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.3     0.011        11      76     130 ..      13      52 ..       3      65 .. 0.40

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.011
   PF03286.9  76 keeeeekkeeededkdteenendddekeeskdskesasaneqsdeddedeideSd 130
                  ee ++ +e++ded+d+ e+e+ddd+                 +++d d +++S 
  MMETSP1325-20131115|3693_1  13 EEEADDGDEDQDEDEDDGEDEDDDDDGC---------------EDEDADASNSSR 52 
                 1111222222222222222222222222...............233334444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       606  (0.0443242); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                       129  (0.00943534); expected 13.7 (0.001)
Passed Fwd filter:                        48  (0.00351083); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.50u 0.45s 00:00:00.95 Elapsed: 00:00:00.51
# Mc/sec: 441.68
//
Query:       MMETSP1325-20131115|3694_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.46s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 357.01
//
Query:       MMETSP1325-20131115|3687_1  [L=767]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-09   37.0   0.2    1.3e-08   35.3   0.1    2.0  1  PF02338.14 OTU-like cysteine protease
  ------ inclusion threshold ------
        0.1   12.2   0.0       0.24   11.0   0.0    1.6  1  PF09409.5  PUB domain


Domain annotation for each model (and alignments):
>> PF02338.14  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   1.9e-12   1.3e-08       2      97 ..      82     195 ..      81     237 .. 0.80

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 1.9e-12
                 ----HHHHHHHHHH-----HHHHHHHHHHSS--HHHH-------------............-HHH........................HHHHHHHHHHHTS-EEE------------- CS
  PF02338.14   2 gDGnCLfhavsqqlwldhdgrkekheelrealveylrehrelfeefleeeeeeYlkeiskdgewge........................eieifalahilrrpiivlkssggealvyik 97 
                 +DG+CL havs+ l+    g + ++++lr  l  +l eh+  +++ l+ +  +  + +++ ++w+                           +i  la++l rpi ++++ + ++l++ +
  MMETSP1325-20131115|3687_1  82 SDGSCLTHAVSRSLY----GAEIFYDALRMDLQCELEEHALWYHDVLNRD--DQSEVMMDAETWEAhwveicaaaapthgefvgaerwlgREHIMGLANVLARPILLVDAVQQDQLASYS 195
                 7**************....99***********999999999999999988..55677777777777888888888888888888888888*****************6665555554433 PP

>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.4e-05      0.24       4      62 ..     399     457 ..     396     464 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.4e-05
   PF09409.5   4 eefkkaleiLlkllkNIlknPneeky.RrirlsNktfkekilsvegavelLellGFkeee 62 
                  ++ +a +++ + lkN+l++ +     R i l+N +++ +   v ga+e+Le+lGF e++
  MMETSP1325-20131115|3687_1 399 AAIAEAKKTITTFLKNLLRDLRTGGTpRPIPLDNVKVRATM-AVTGAKECLEALGFHEKR 457
                 56778889999999999999987644399********9765.599***********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (767 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.59s 00:00:01.48 Elapsed: 00:00:00.73
# Mc/sec: 2517.82
//
Query:       MMETSP1325-20131115|3696_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|3698_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   12.4   0.0       0.16   11.6   0.0    1.4  1  PF03527.9 RHS protein


Domain annotation for each model (and alignments):
>> PF03527.9  RHS protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.2e-05      0.16       5      25 ..      80     100 ..      77     105 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.2e-05
   PF03527.9   5 HtDqiGtPleLtdseGetvWq 25 
                 H+D iG Pl L   + +tv +
  MMETSP1325-20131115|3698_1  80 HCDEIGVPLRLKGYDDDTVIS 100
                 **********98777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 521.56
//
Query:       MMETSP1325-20131115|3695_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-31  107.6  22.5    9.9e-31  107.1  15.6    1.1  1  PF04889.7  Cwf15/Cwc15 cell cycle control protein
  ------ inclusion threshold ------
      0.026   12.7  18.3      0.033   12.4  12.7    1.3  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
      0.041   12.2  19.0      0.049   11.9  13.2    1.1  1  PF03344.10 Daxx Family
      0.044   13.2  24.2      0.066   12.6  16.7    1.4  1  PF05764.8  YL1 nuclear protein
       0.78    8.8  21.5        1.1    8.4  14.9    1.2  1  PF05285.7  SDA1
        1.1    6.9  21.8        1.4    6.6  15.1    1.1  1  PF04147.7  Nop14-like family
        2.5    7.1   9.9        3.5    6.6   6.8    1.2  1  PF06524.7  NOA36 protein
        3.5    6.6  13.1        4.7    6.2   9.1    1.2  1  PF04502.8  Family of unknown function (DUF572)
        3.6    5.3  13.0        4.1    5.1   9.0    1.1  1  PF02724.9  CDC45-like protein


Domain annotation for each model (and alignments):
>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1  15.6   6.5e-34   9.9e-31      60     233 ..       6     171 ..       3     176 .. 0.83

  Alignments for each domain:
  == domain 1    score: 107.1 bits;  conditional E-value: 6.5e-34
   PF04889.7  60 raeLleaEaaakakkekskkkralenakkeeeleaakeaeededeekeakrkkkleeareidaddsdkseeesdesdddsdddddeDetaeLlrELekiKkeraeekereeeekaaeeekereeeiltgNPLln.ksedfkvkrrWdddvvFknqargeedkkkreFinDtvrsd 233
                 r+ L+ aE +a + k k+kk +ale++++++ l  ak+   + +e +++        + +   dd d++eee+d++ d+s+d++deD+++ L+rELekiK er++ ++++e e+aa +ek   +  l gNPL+  ++++ +vkr+W+ddvvFknqar+e+++kkr F+nDt+r+d
  MMETSP1325-20131115|3695_1   6 RDALESAEDRALDDKLKAKKRSALEDSSTSSVLGGAKPLMLKAEEVDTD--------RINRKYDDGDDEEEEEDSDLDSSSDEEDEDDEELLQRELEKIKAEREKVRQEKEAEEAAIAEKTASDAALLGNPLMLgAAKSSQVKRKWNDDVVFKNQARTEPEAKKR-FVNDTIRND 171
                 7789999999999998888999999999888888777766665444444........333333333344555666667777799************************************************9878899******************99999988.*******98 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4  12.7   2.1e-05     0.033     261     327 ..      47     113 ..       5     175 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.1e-05
                 XXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF05793.7 261 kkrggdddadeydsddGddegrEedyisDdsasendpeeredklseEeeekkeieqdedeeekeeek 327
                 k  ++d d  +   ddGdde+ Eed   D+s++e+d++++e  + e e+ k e e+  +e+e ee  
  MMETSP1325-20131115|3695_1  47 KAEEVDTDRINRKYDDGDDEEEEEDSDLDSSSDEEDEDDEELLQRELEKIKAEREKVRQEKEAEEAA 113
                 556899999999*************988888888776666654444444555556655555555543 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9  13.2   3.3e-05     0.049     396     505 ..       7     132 ..       3     196 .. 0.52

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.3e-05
  PF03344.10 396 ddtEeeErrkrqerkrrgkesrskdkslassestesP.llasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeee..eeadneeeedleassegegddeeeeedee.............k 505
                 d  E  E r   ++ + +k+s  +d+s++s+  ++ P +l+++e ++++   k +d +d+e+ee+ + + + +ee+e++ee  + + ++++ + e+  ++++ +e    +++              
  MMETSP1325-20131115|3695_1   7 DALESAEDRALDDKLKAKKRSALEDSSTSSVLGGAKPlMLKAEEVDTDRINRKYDDGDDEEEEEDSDLDSSSDEEDEDDEEllQRELEKIKAEREKVRQEKEAEEAAIAEKTasdaallgnplmlG 132
                 6668888888889999999999999************77788998888766665555555555444333333333333333002223333333333333333222222222222233333332220 PP

>> PF05764.8  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6  16.7   4.3e-05     0.066      42     107 ..      48     139 ..      12     184 .. 0.55

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.3e-05
   PF05764.8  42 EeedDee.....feeeeeeeeeeeDsdfddseddeeesddeeegekele....keekekkkkrkkkkaykeplk...................k 107
                  ee D +     + + ++eeeee Dsd+d+s+d ee++ddee   +ele    ++ek +++k++ + a+ e++                     
  MMETSP1325-20131115|3695_1  48 AEEVDTDrinrkYDDGDDEEEEE-DSDLDSSSD-EEDEDDEELLQRELEkikaEREKVRQEKEAEEAAIAEKTAsdaallgnplmlgaakssqV 139
                 44444332233399999999998.*******99.899999999999999553222222233323333333333344444444443333322221 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  14.9    0.0007       1.1      73     175 ..       8     121 ..       5     167 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0007
   PF05285.7  73 lLekdkeeekkkk.eeeegleseedddee............WdvdsdeededeDe.egewvdvesdeee.essDsedeeeeseeeeeeeesekkkkeesdeekseeeeeeaaeeeeee 175
                  Le  ++ +  +k ++++ ++ e+++++              +vd+d  + + D+ ++e+++++sd     ssD+ede++e+  +  +e ++ k+++e+ ++++e+ee++ ae+ +++
  MMETSP1325-20131115|3695_1   8 ALESAEDRALDDKlKAKKRSALEDSSTSSvlggakplmlkaEEVDTDRINRKYDDgDDEEEEEDSD--LdSSSDEEDEDDEELLQ--RELEKIKAEREKVRQEKEAEEAAIAEKTASD 121
                 566655555555555555555555555555666555555433668888888888745555555555..32688888886633323..3333333333333333333333333333333 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  15.1    0.0009       1.4     323     414 ..      18     118 ..       4     167 .. 0.46

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0009
   PF04147.7 323 dddenfglgsaeeeeeeee...........eegvededeeeddddeeeeeedvdedeeeedeedeesddeeeeeeeeeaseeeaeakkkkkktkkkkksaeet 414
                 dd+ + ++ sa e++++ +           +e+v+++  + + dd ++eee++d+d +++++e++e+d+e  + e e+ ++e+++  ++k++++  +  ae+t
  MMETSP1325-20131115|3695_1  18 DDKLKAKKRSALEDSSTSSvlggakplmlkAEEVDTDRINRKYDDGDDEEEEEDSDLDSSSDEEDEDDEELLQRELEKIKAEREKVRQEKEAEE--AAIAEKT 118
                 2232333333333333333455555555553444444444333333333444444444444444444444444444442222222222222222..2222222 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.8    0.0023       3.5     261     301 ..      50      91 ..      18     108 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0023
   PF06524.7 261 ygdaksvnygy.esdddeeesaedydeeededddddeeedet 301
                 + d+   n  y ++dd+eee++ d d  +de+d+ddee  + 
  MMETSP1325-20131115|3695_1  50 EVDTDRINRKYdDGDDEEEEEDSDLDSSSDEEDEDDEELLQR 91 
                 44444444444145888899999***9999999999985544 PP

>> PF04502.8  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   9.1    0.0031       4.7     178     290 ..      18     161 ..       1     194 [. 0.46

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0031
   PF04502.8 178 reekkeeeeeeeedeelikslslg.........leseedrrlakdedkedekekkketseksakssssakatdiekksaakkseeessskakkns........................esklkskkalkslvvkkkaapeeskss 290
                 + + k++++++ ed    + l  +          ++++++r  +d+d+e+e  ++++   +s++++ ++ ++ ++++ ++ k+e+e++ + k  +                        +s++ ++k  + +v k +a++e+++++
  MMETSP1325-20131115|3695_1  18 DDKLKAKKRSALEDSSTSSVLGGAkplmlkaeeVDTDRINRKYDDGDDEEE--EEDSDLDSSSDEEDEDDEELLQRELEKIKAEREKVRQEKEAEeaaiaektasdaallgnplmlgaaKSSQVKRKWNDDVVFKNQARTEPEAKK 161
                 223333333333333333333222555543222334444444444333333..455555555566666666666666666666666666666666222222333344444444444444333344444444444444444444433 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   9.0    0.0027       4.1     132     187 ..      53     117 ..      11     168 .. 0.49

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0027
   PF02724.9 132 e...eesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsnessl.........a 187
                     +++ +d+d+e++ee+++ ++s+   +e+ded+e+  ++e e++++++++ ++++         +
  MMETSP1325-20131115|3695_1  53 TdriNRKYDDGDDEEEEEDSDLDSSS---DEEDEDDEELLQRELEKIKAEREKVRQEKeaeeaaiaeK 117
                 12222222222222222222222222...122222222222222222211111111111222333330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1339  (0.0979374); expected 273.4 (0.02)
Passed bias filter:                      581  (0.0424956); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.84u 0.39s 00:00:01.23 Elapsed: 00:00:00.55
# Mc/sec: 1145.89
//
Query:       MMETSP1325-20131115|3699_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 260.66
//
Query:       MMETSP1325-20131115|3700_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 264.09
//
Query:       MMETSP1325-20131115|3701_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 261.42
//
Query:       MMETSP1325-20131115|3703_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|3706_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-13   49.5   0.0    6.2e-13   48.8   0.0    1.3  1  PF01399.22 PCI domain
  ------ inclusion threshold ------
      0.096   12.1   0.0        0.2   11.1   0.0    1.6  1  PF01726.11 LexA DNA binding domain


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   9.1e-17   6.2e-13       3     104 ..       7     108 ..       5     109 .. 0.93

  Alignments for each domain:
  == domain 1    score: 48.8 bits;  conditional E-value: 9.1e-17
                 XXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXX------HHHHHHHHHHHHHS-SEE-TTT----SSS-H.HHHHHHHHHHHH-------B-S----EE-- CS
  PF01399.22   3 ysdllkalrsgnlsgfseelkdleeelladdglsqllesLekkvrerllrqvskiyssislerlaklldlsv.devEkilvklIadgelrakidqpsgivvfk 104
                 y+ + + ++++n +g +ee+++   ++++ d++  l ++L + ++ r +++++  y ++sl ++a+ ++l + +e+E  lv +I +g++ a+idq++g+v f+
  MMETSP1325-20131115|3706_1   7 YQTMGQMFTDNNREGLEEEMNKS-FDVIDGDNNMGLAKQLLEALTSRRIQRLTHTYITLSLTDIAQNVGLAGpEEAEARLVGMIDKGRIFARIDQMTGMVRFE 108
                 56666778888899999999999.99999999999*****************************************************************997 PP

>> PF01726.11  LexA DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0     3e-05       0.2      27      56 ..      65      94 ..      46     102 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3e-05
                -HHHHHHHHTS-.----HHHHHHHHH---E CS
  PF01726.11 27 sireiaralglkSpsaveehLkaLerKGyi 56
                s  +ia+++gl+ p+ +e +L  +  KG i
  MMETSP1325-20131115|3706_1 65 SLTDIAQNVGLAGPEEAEARLVGMIDKGRI 94
                7889***********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 801.69
//
Query:       MMETSP1325-20131115|3705_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-19   69.4   0.6    2.3e-19   68.7   0.4    1.3  1  PF00736.14 EF-1 guanine nucleotide exchange domain
     0.0047   16.6   0.1      0.013   15.2   0.1    1.8  1  PF13410.1  Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.095   12.5   0.1      0.095   12.5   0.0    3.1  3  PF00043.20 Glutathione S-transferase, C-terminal domain
       0.12   12.2   0.2       0.14   11.9   0.1    1.1  1  PF03235.9  Protein of unknown function DUF262
       0.24   10.6   8.2       0.33   10.1   5.7    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
       0.25    9.6   8.7       0.32    9.3   6.0    1.1  1  PF03344.10 Daxx Family
       0.37   11.3  15.3       0.63   10.5  10.6    1.3  1  PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
        1.2    8.6  14.6        1.9    7.9  10.1    1.3  1  PF04546.8  Sigma-70, non-essential region
        1.8    7.4   7.1        2.4    7.0   4.9    1.1  1  PF06674.6  Protein of unknown function (DUF1176)
        2.1    6.9  12.5        2.7    6.5   8.7    1.1  1  PF10310.4  Protein of unknown function (DUF2413)
        5.5    7.1  15.7        8.6    6.5  10.9    1.2  1  PF14303.1  No apical meristem-associated C-terminal domain
        5.8    4.3   6.0        7.3    4.0   4.1    1.0  1  PF05758.7  Ycf1
          6    6.4   7.4         12    5.5   5.1    1.4  1  PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit


Domain annotation for each model (and alignments):
>> PF00736.14  EF-1 guanine nucleotide exchange domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.4   2.2e-22   2.3e-19       4      85 ..     159     241 ..     155     244 .. 0.92

  Alignments for each domain:
  == domain 1    score: 68.7 bits;  conditional E-value: 2.2e-22
                 -EEEEEESSSSS-HHHHHHHHHTCS-TT--..--EEEEEE-----EEEEEE---------HHHHHHHH...HHSTTEEEEEEEE CS
  PF00736.14   4 vvlkvkPesdevdldelekkvkkkikeegltwgkaskkepiaFGlkkLqvsvvieDdevstdeleeki..lgleeeVqsveivs 85 
                   l+vkP+++e dl el +k+k+++k egl+wg++ +++p+a+G+kk+ +++vi+   vs+de++e+i    + +e+qs+e ++
  MMETSP1325-20131115|3705_1 159 CNLEVKPWEEEQDLMELFNKIKSTVKREGLVWGENCALKPVAYGIKKICMTAVIPM-SVSMDEIIEEIleDIFPDEIQSMEMTN 241
                 5689**************************************************86.6********99777788******9876 PP

>> PF13410.1  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.3e-05     0.013      15      41 ..       8      34 ..       5      52 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.3e-05
                HGGG------SS.-------HHHHHHH CS
   PF13410.1 15 LdaleahLadgpfllGdrpslaDiala 41
                ++al+ahLad+++ +G  +s++Di ++
  MMETSP1325-20131115|3705_1  8 VEALNAHLADKSYVMGYSFSAGDIQAF 34
                79*********************9876 PP

>> PF00043.20  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     9e-05     0.095      35      93 ..       6      57 ..       3      59 .. 0.77
   2 ?   -3.4   2.9       8.2   8.6e+03      20      45 ..     124     149 ..      62     156 .. 0.70
   3 ?   -3.1   0.0       7.1   7.4e+03      22      37 ..     168     183 ..     163     185 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9e-05
                HHHHHHHHHHHTSSSSSSSS-BHHHHHHHHHHHHHHHHTTTTTHTT-HHHHHHHHHHHH CS
  PF00043.20 35 evlealeeelsgkkylvGdkltlADialfpalewlqrldgnfleeefPklkawlkriaa 93
                +++eal+++l++k y++G +++  Di +f  +  ++        +++P+ ++w+ +iaa
  MMETSP1325-20131115|3705_1  6 PSVEALNAHLADKSYVMGYSFSAGDIQAFKQFPLPD-------KTACPHAYRWYIHIAA 57
                6799**********************9998732222.......2556777777777766 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 8.2
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00043.20  20 ekdeaeveeakrkvlevlealeeels 45 
                  k +a++++ + ++ e  +a ee+l+
  MMETSP1325-20131115|3705_1 124 AKAAALKAKRDAELEEKKKAAEERLA 149
                 44444555555555555555555555 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 7.1
                 HHHHHHHHHHHHHHHH CS
  PF00043.20  22 deaeveeakrkvlevl 37 
                 +e++++e + k+++ +
  MMETSP1325-20131115|3705_1 168 EEQDLMELFNKIKSTV 183
                 4456777777776655 PP

>> PF03235.9  Protein of unknown function DUF262
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00013      0.14      80     172 ..      91     206 ..      54     249 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00013
   PF03235.9  80 eesekdiknleaeiekekeeedeqrikrreresdkellqklirseklsllekeelaelnsltkkdl....akeekrneeknlikayevieeilksa...................l 172
                  +++++ ++ e+++ +e+eee+e+  +   ++++k+   k  r+ +l++++k  +++l +++ k+      + + ++ee+ l+++++ i++ +k++                    
  MMETSP1325-20131115|3705_1  91 AAAAEEDDDEEFDFGDEDEEEEEETASPANDRKAKAAALKAKRDAELEEKKKAAEERLAKKEAKQRslcnLEVKPWEEEQDLMELFNKIKSTVKREglvwgencalkpvaygikkI 206
                 345556666667777766666666666666666666666666666666666555555555444444569977777**************998888888777777666655543330 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   5.7   0.00031      0.33      42     121 ..      86     154 ..      53     176 .. 0.42

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00031
   PF07423.6  42 kkasadeeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkeeeseedeketeekeesnv 121
                 kka++   +ee  ++e +  +e+++eee++a+  +d++            ++++ + k ++e e+++++ e++  +++  
  MMETSP1325-20131115|3705_1  86 KKAAKAAAAEEDDDEEFDFGDEDEEEEEETASPANDRKA-----------KAAALKAKRDAELEEKKKAAEERLAKKEAK 154
                 122222222222222223333333333333333333333...........111111111111122222222222222222 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   6.0    0.0003      0.32     429     512 ..      72     146 ..      59     191 .. 0.50

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0003
  PF03344.10 429 tesP.llasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedeekndevakg 512
                 + sP ++a+  ++ ++ a+  + eedd++    + + ++e+eeeeee  + +n+ +  + a + +++ + ee++++       + 
  MMETSP1325-20131115|3705_1  72 GPSPkTKAAAPAPAKKAAKAAAAEEDDDE----EFDFGDEDEEEEEETASPANDRKAKAAALKAKRDAELEEKKKAA------EE 146
                 55664444445555555554444444332....34445555555555555555554444444433333333333222......11 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5  10.6    0.0006      0.63       6      68 ..      94     154 ..      90     176 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0006
   PF11942.3   6 AevddeeeEeeeeedeeeelseeaefieea.eddrrhreldrrrekeeeedaeelaevl.klekr 68 
                 Ae+dd+ee +     ++e+++ee+e  ++a +++++   l+ +r+ e+ee++++ +e+l k e +
  MMETSP1325-20131115|3705_1  94 AEEDDDEEFD----FGDEDEEEEEETASPAnDRKAKAAALKAKRDAELEEKKKAAEERLaKKEAK 154
                 4444333333....3333333333334444478999999999999999999********663332 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  10.1    0.0018       1.9      35     123 ..      85     180 ..      69     187 .. 0.50

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0018
   PF04546.8  35 aaeeeeaeeeseddeeeeeddddddededeeeeseeadegpdpeearerFaelrkqyeklekalekegrkskk.......aekareelaeefksfr 123
                 a+++++a++++edd+ee +  d+d+e+e+e ++ +++++++     ++r ael+++ +++e+ l+k+++k+ +         ++ ++l e+f +++
  MMETSP1325-20131115|3705_1  85 AKKAAKAAAAEEDDDEEFDFGDEDEEEEEETASPANDRKAKAAALKAKRDAELEEKKKAAEERLAKKEAKQRSlcnlevkPWEEEQDLMELFNKIK 180
                 233333333444444444444555555555544444555555555556666777777777776655555533322221113345555555555555 PP

>> PF06674.6  Protein of unknown function (DUF1176)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.9    0.0023       2.4     151     235 ..      63     153 ..      53     173 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0023
   PF06674.6 151 GtvtAlvkkGskpassvppapaapviaqaapapaaa.......plaeaeareladaillkallrtaeddeecdslrpeseslevtrldddqa 235
                    +A+v  G +p+ ++ ++++a+++a+aa+a + +         +e+e++e+a++++ +++ ++a  + + d++ +e+++ + +rl++++a
  MMETSP1325-20131115|3705_1  63 AAMAAMVPAGPSPKTKAAAPAPAKKAAKAAAAEEDDdeefdfgDEDEEEEEETASPANDRKAKAAA-LKAKRDAELEEKKKAAEERLAKKEA 153
                 556899999****99999888888887777776666799999978888888888888833333333.3335566666666667888888776 PP

>> PF10310.4  Protein of unknown function (DUF2413)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   8.7    0.0026       2.7      12      93 ..      78     158 ..      70     191 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0026
   PF10310.4  12 kkkkk.kkkkskaskkstkkdediLefLdeleksekakkkkkaeeaekaetprvekkkskkkesekaskeekeakprkseese 93 
                 k++++ ++kk++++++++++d++ ++f de e++e++++    ++  ka++  ++ k++ + e++k+++ee+ ak+++++ s 
  MMETSP1325-20131115|3705_1  78 KAAAPaPAKKAAKAAAAEEDDDEEFDFGDEDEEEEEETASP--ANDRKAKAAALKAKRDAELEEKKKAAEERLAKKEAKQRSL 158
                 33333467777778899999999******999966555544..3333344444455566666666666665555444444443 PP

>> PF14303.1  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  10.9    0.0082       8.6      29     133 ..      86     174 ..      71     183 .. 0.56

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0082
   PF14303.1  29 kkkkkkksnsskatnsseenedeeeeeteerkRpeGrKkaKeklrrgvekkeklkkkskseeeekekeeeekfakelakaekkrleleekkaeakrmkeeerIMt 133
                 kk   k++  +++++++ +  de+eee+ee++ p +  kaK++         +lk  ++++e+e     e+k a+e + a+k+ ++ +   +e+k ++ee+++M+
  MMETSP1325-20131115|3705_1  86 KK-AAKAAAAEEDDDEEFDFGDEDEEEEEETASPANDRKAKAA---------ALKA-KRDAELE-----EKKKAAEERLAKKEAKQRSLCNLEVKPWEEEQDLME 174
                 22.2233333333333334455556666678888888888863.........3322.1112222.....333333444445666677777888888888888886 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   4.1     0.007       7.3     220     311 ..      82     162 ..      65     199 .. 0.40

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.007
   PF05758.7 220 piltkklkelseieerseeekkkeieaesekkrakqeqeeeeeedsslaseekedkdkideqeekkveekkekesilkkkisqekkkleilk 311
                 p   kk  +++ +ee ++ee +   e e+e+++++   + +           k ++  ++++++ + eekk+  + +  k++ ++++l  l+
  MMETSP1325-20131115|3705_1  82 PAPAKKAAKAAAAEEDDDEEFDFGDEDEEEEEETASPANDR-----------KAKAAALKAKRDAELEEKKKAAEERLAKKEAKQRSLCNLE 162
                 44445554444444443333333333333332222222222...........2222222222222222222222222222222222222211 PP

>> PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   5.1     0.011        12       9      67 ..      93     150 ..      85     165 .. 0.41

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.011
   PF05320.7   9 dyesdddeeeeyeeeeedeedaeslessdvsslkqsdykvesaseeiedaessskqvse 67 
                 ++e+dddee ++ +e+e+ee++ + +++d  ++k ++ k +   e +e+++ +++++++
  MMETSP1325-20131115|3705_1  93 AAEEDDDEEFDFGDEDEEEEEETASPANDR-KAKAAALKAKRDAELEEKKKAAEERLAK 150
                 333444443444444444333333333332.3344444433333333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1171  (0.0856495); expected 273.4 (0.02)
Passed bias filter:                      593  (0.0433733); expected 273.4 (0.02)
Passed Vit filter:                        89  (0.00650965); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.81u 0.42s 00:00:01.23 Elapsed: 00:00:00.55
# Mc/sec: 1185.11
//
Query:       MMETSP1325-20131115|3709_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 252.47
//
Query:       MMETSP1325-20131115|3708_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-10   38.0   7.2    1.8e-09   37.0   5.0    1.6  1  PF00335.15 Tetraspanin family
  ------ inclusion threshold ------
      0.043   13.3   0.6          3    7.3   0.3    2.2  2  PF02453.12 Reticulon
      0.064   13.1   0.9       0.11   12.3   0.6    1.3  1  PF01346.13 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase


Domain annotation for each model (and alignments):
>> PF00335.15  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   5.0     4e-13   1.8e-09       2     111 ..      11     120 ..      10     206 .. 0.79

  Alignments for each domain:
  == domain 1    score: 37.0 bits;  conditional E-value: 4e-13
  PF00335.15   2 lkyllfllnllfllvGlallgvgvwlkvsldllaeasnssksavilliiviGviililgilGcigalkesk.cllliyailllllflaelalailafvlrsqleaslksgl 111
                 +k ll ++n++ + +G++++g+g+w+ +  + ++  ++ +++ ++++ +v+G i++i+++l ++g+      c l + a l + ++l++++ ai  +v ++ ++++l+++ 
  MMETSP1325-20131115|3708_1  11 FKSLLTIFNFVDFSCGAVFIGYGCWVHSKVAEVD-DDDATATGFWIMPVVVGTILVITALLSFLGLTFDVCrCGLCVSAWLAVPIALLQFSTAIYLLVSKDTFWDYLEDHE 120
                 688999********************43333333.333445667777777***************6655551666666669999**********************99864 PP

>> PF02453.12  Reticulon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.3   0.00065         3       9      88 ..      47     118 ..      46     124 .. 0.81
   2 ?    4.1   0.0     0.006        27      52      88 ..     139     178 ..     128     185 .. 0.59

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00065
  PF02453.12   9 dpkksgvvlgsllviwllfsllelsllsvvskllllllavtfllelakkllnaskkgpfkepldpevtlseetveeiaes 88 
                 d  ++g  ++ ++v  +l++ + ls+l + + ++   l+v++ l++   ll+ s         ++ + +s++t+ +++e+
  MMETSP1325-20131115|3708_1  47 DATATGFWIMPVVVGTILVITALLSFLGLTFDVCRCGLCVSAWLAVPIALLQFST-------AIY-LLVSKDTFWDYLED 118
                 566788888888888889999999999999***********99999999999966.......555.77788877777665 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.006
  PF02453.12  52 lelakkllnaskkg...pfkepldpevtlseetveeiaes 88 
                 +++++ +  ++ +g    ++++l  +++ls+e++e+++e+
  MMETSP1325-20131115|3708_1 139 VIVVGLFGLGVMQGlrfAMSKKLRNYMHLSKEEFERALEQ 178
                 33333333333333444333445555**********9987 PP

>> PF01346.13  Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.6   2.5e-05      0.11      50     115 ..     149     217 ..     147     219 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.5e-05
  PF01346.13  50 llkGlqdalagk...esklteeeiqkvlqalqkklqakqeekakkkaeenkaegeaFlaenkkkeGVkt 115
                 +++Gl+ a+++k    + l++ee + +l++  ++ +  ++e+ ++ +++  a+ + ++++++  +GV t
  MMETSP1325-20131115|3708_1 149 VMQGLRFAMSKKlrnYMHLSKEEFERALEQEATDFEIHRAEQRAETQSKYNAKRAMYREKYAGIAGVGT 217
                 6788888885542115689*******************************************9999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       854  (0.0624634); expected 273.4 (0.02)
Passed bias filter:                      573  (0.0419105); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 1083.15
//
Query:       MMETSP1325-20131115|3710_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-49  167.1   0.0    1.8e-49  166.8   0.0    1.1  1  PF00334.14 Nucleoside diphosphate kinase


Domain annotation for each model (and alignments):
>> PF00334.14  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.8   0.0   1.3e-53   1.8e-49       1     134 [.       7     140 ..       7     141 .. 0.99

  Alignments for each domain:
  == domain 1    score: 166.8 bits;  conditional E-value: 1.3e-53
                 --EEEEE-HHHHCTT-HHHHHHHHHH---EEEEEEEE---HHHHHHHTGGGTTSTTHHHHHHHHT---EEEEEEE---CHHHHHHH----STTCS------------GGG-SEEE--SHHHHHHHHHHHS-GGG CS
  PF00334.14   1 ertlvliKPdavkrgligeiisrleekglkivalkmlqlteeqaeehYaehkgkpffeelvefitsgpvvalvlegenavekvrellGatnpaeaapgtiRgdfavslgeNlvHgSdseesaereiklfFkeee 134
                 ert++++KPd+v+rgl+g+iisr+e++gl + a+k+++++ ++++ehY + ++kpff++l++++ts+pv+ +v++g+ ave+ r +lG+tnp  + +gt+Rgdf++++g+Nl+HgSds+e ae+ei+++F+e++
  MMETSP1325-20131115|3710_1   7 ERTFIMVKPDGVERGLAGRIISRFEDRGLALEAAKFVRADPNLLKEHYGHIADKPFFPALLRYMTSAPVFQMVWKGKGAVEAGRAILGETNPLSSPTGTVRGDFGLDVGRNLCHGSDSPEAAEKEIAMWFSEDQ 140
                 8**********************************************************************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.54
# Mc/sec: 936.35
//
Query:       MMETSP1325-20131115|3716_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        90  (0.0065828); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.52
# Mc/sec: 152.08
//
Query:       MMETSP1325-20131115|3713_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-06   26.8   0.0    3.9e-06   26.2   0.0    1.2  1  PF13833.1  EF-hand domain pair
      2e-05   23.4   0.0    3.1e-05   22.8   0.0    1.4  1  PF00036.27 EF hand
    0.00013   21.0   0.1    0.00021   20.3   0.0    1.3  1  PF13202.1  EF hand
    0.00033   20.1   0.0     0.0018   17.8   0.0    2.0  2  PF13405.1  EF-hand domain
    0.00046   20.1   0.0    0.00068   19.6   0.0    1.2  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.011   15.0   0.3      0.018   14.3   0.2    1.3  1  PF09851.4  Short C-terminal domain
      0.055   13.2   0.0        0.1   12.3   0.0    1.3  1  PF09066.5  Beta2-adaptin appendage, C-terminal sub-domain
          3    7.4   5.3       0.43   10.0   0.8    1.8  2  PF00132.19 Bacterial transferase hexapeptide (six repeats)


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   2.3e-09   3.9e-06      10      49 ..      92     128 ..      86     132 .. 0.83

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 2.3e-09
   PF13833.1  10 LkralallglkglseeevdilfrefDtdgdGkisfeEFcv 49 
                 L+ al+ lg   ++e e+ ++f+++D++ dG i++eEF +
  MMETSP1325-20131115|3713_1  92 LQNALKPLG---VTEAECLAIFSKMDRNADGVITQEEFEE 128
                 677775453...**************************55 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   1.8e-08   3.1e-05       1      26 [.     105     130 ..     105     133 .. 0.89

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 1.8e-08
                 HHHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkeal 26 
                 e+  +F+++D++ dG I+ eEf e +
  MMETSP1325-20131115|3713_1 105 ECLAIFSKMDRNADGVITQEEFEETW 130
                 6789******************9865 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.2e-07   0.00021       4      22 ..     109     127 ..     107     129 .. 0.92

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.2e-07
                 HHHHH--S----B-HHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELk 22 
                 +F+++D N DG I+ eE++
  MMETSP1325-20131115|3713_1 109 IFSKMDRNADGVITQEEFE 127
                 6*****************7 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.81   1.4e+03      13      31 .]      82     100 ..      79     100 .. 0.76
   2 !   17.8   0.0   1.1e-06    0.0018       4      23 ..     108     127 ..     105     134 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.81
                 ---.-B---HHHHHHH.H-- CS
   PF13405.1  13 gdG.kidaeELrdaLrkslg 31 
                 g+G  ++   L++aL+  lg
  MMETSP1325-20131115|3713_1  82 GSGvVVTCYNLQNALK-PLG 100
                 67767788999***99.665 PP

  == domain 2    score: 17.8 bits;  conditional E-value: 1.1e-06
                 ---GCC-------B---HHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELr 23 
                 ++F ++D++ dG i++eE+ 
  MMETSP1325-20131115|3713_1 108 AIFSKMDRNADGVITQEEFE 127
                 79****************96 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0     4e-07   0.00068      24      64 ..      94     128 ..      86     130 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 4e-07
   PF13499.1  24 rllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64 
                 ++lk lg       ++ ++ +if ++D n dGv++ eEf++
  MMETSP1325-20131115|3713_1  94 NALKPLG------VTEAECLAIFSKMDRNADGVITQEEFEE 128
                 5555554......456677788*****************86 PP

>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   1.1e-05     0.018      11      24 ..     115     128 ..     114     128 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.1e-05
   PF09851.4  11 LyarGeIteEEFea 24 
                 + a+G+It+EEFe+
  MMETSP1325-20131115|3713_1 115 RNADGVITQEEFEE 128
                 5699********97 PP

>> PF09066.5  Beta2-adaptin appendage, C-terminal sub-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   5.9e-05       0.1       4      25 ..     118     139 ..     116     147 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.9e-05
   PF09066.5   4 dgkldreeFeetWqslpesnkq 25 
                 dg +++eeFeetWq+  +++k+
  MMETSP1325-20131115|3713_1 118 DGVITQEEFEETWQEAAKNYKN 139
                 899***********99888865 PP

>> PF00132.19  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.8   0.00025      0.43       2      18 ..       2      18 ..       1      20 [. 0.68
   2 ?   -2.8   0.1       2.8   4.8e+03      29      34 ..      82      87 ..      82      88 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00025
                EEE-TTEEE-TTEEEES CS
  PF00132.19  2 tvIGenvlIgpnvvigg 18
                +v+Ge+++Ig ++v++ 
  MMETSP1325-20131115|3713_1  2 IVVGEGAKIGCGAVVVK 18
                46777777777777765 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 2.8
                -TTEEE CS
  PF00132.19 29 gagvvi 34
                g+gvv+
  MMETSP1325-20131115|3713_1 82 GSGVVV 87
                677777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 775.55
//
Query:       MMETSP1325-20131115|3714_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 929.79
//
Query:       MMETSP1325-20131115|3697_1  [L=495]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-63  213.9   0.0    2.6e-63  213.5   0.0    1.2  1  PF00069.20 Protein kinase domain
      6e-27   94.2   0.0    8.2e-27   93.8   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
    0.00046   19.1   0.1    0.00083   18.3   0.1    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.023   14.0   0.0      0.044   13.1   0.0    1.4  1  PF02149.14 Kinase associated domain 1
      0.058   13.3   0.0         19    5.2   0.0    2.5  2  PF07643.6  Protein of unknown function (DUF1598)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.5   0.0   9.4e-67   2.6e-63       2     260 .]      18     292 ..      17     292 .. 0.89

  Alignments for each domain:
  == domain 1    score: 213.5 bits;  conditional E-value: 9.4e-67
                 EEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH...HHHHHHHHH-TTB--EEEEEEE...........STEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH.....HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   2 elleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr...ElkilkklsHpnivkllevfee...........kdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks.....eelkdlikkllekdpakRltaeeilkhpwl 260
                  ++++lG+G  GkV  +++ +tg++vA+K+++k++  ++ +++      E++ +++l+Hpni++l +v ++           k+ ++l le++egg+lfd+l++ g + ++ ++++++q+l++le +H+ gi+HrDLKpeN+Lld +++lk+aDFGla    + ++ ++t vgt+ YmAPEv+ ++ ++++k+D+Ws+Gv+l+ +l g++pf+++  +     ++ +++++ ++ +   + +s     + ++d+++ ++  d +kR +++++ +hpw+
  MMETSP1325-20131115|3697_1  18 AMGKTLGAGIQGKVKLGVNLQTGQRVALKCMDKNKLGRDRTRQMEMlerEIQAMESLQHPNILNLQHVTMNaeyprkgtkgtKEVVLLALELAEGGELFDYLMHTGAFGDDIARTYFRQMLSALELCHNAGIYHRDLKPENLLLDADYQLKLADFGLAAINLEMDTLCHTCVGTKSYMAPEVMARQGYDGAKADLWSAGVVLFIMLAGCPPFQQA--APGDWWFNAVRSNRHDKFWM-AHLRSapdfpKLAQDFLNLIFVADSSKRASIDDLWNHPWM 292
                 67899***************************99877666554333578********************************888999***********************************************************************988999********************9****************************99..44444444444433333333.333334677799***************************7 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.8   0.0     3e-30   8.2e-27       3     214 ..      19     237 ..      17     288 .. 0.84

  Alignments for each domain:
  == domain 1    score: 93.8 bits;  conditional E-value: 3e-30
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECT....TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBE...SSSS..........EEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEE.HHHHHHH---HHHHHHTTT-GTTTTSHHHHH CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke....saeeeekeefleeakimkklkhpnivkllgvct...keep..........llivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkft.sksDvWsfGvllwEiftlgespypglsneev 214
                 +gk+lG+G  GkV  g+      ++ ++Va+K++++    +++ ++ e++ +e+++m++l+hpni++l  v +      p          +l+ +e+++gG+L ++L ++   ++  +    +  q+ +++e  ++  + HrdL   N Ll+ + + k++DfGLa    ++d+    +++     +mapE++ ++ +   k+D Ws Gv+l+ ++  g  p+++  + + 
  MMETSP1325-20131115|3697_1  19 MGKTLGAGIQGKVKLGVNL----QTGQRVALKCMDKnklgRDRTRQMEMLEREIQAMESLQHPNILNLQHVTMnaeY--PrkgtkgtkevVLLALELAEGGELFDYLMHT--GAFGDDIARTYFRQMLSALELCHNAGIYHRDLKPENLLLDADYQLKLADFGLAAINLEMDTL--CHTCVGTKSYMAPEVMARQGYDgAKADLWSAGVVLFIMLA-GCPPFQQAAPGDW 237
                 689**************99....89999******553454455666888889*********************6440..255566778889999**************97..9999999999*******************************************988666655..567888999**********997479***********8887.6699988766554 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.1     3e-07   0.00083      59     165 ..      65     172 ..      46     182 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3e-07
   PF06293.9  59 vrEfrllkrLreagvpvpkpvaaaaq..kvgle..yqAdllteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDl 165
                  rE+++++ L+   +  ++ v ++a+  ++g +     +ll  +l++  +L ++l +   +++ + r+ +++  ++ +  h+ag++H+dl + n+lld++    ++ l D+
  MMETSP1325-20131115|3697_1  65 EREIQAMESLQHPNILNLQHVTMNAEypRKGTKgtKEVVLLALELAEGGELFDYLMHTGAFGDDIARTYFRQMLSALELCHNAGIYHRDLKPENLLLDADY---QLKLADF 172
                 599*************99999876532255555559999*****************8777**************************************997...6666666 PP

>> PF02149.14  Kinase associated domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.6e-05     0.044      11      36 ..     421     447 ..     420     458 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.6e-05
  PF02149.14  11 vcKlpr.lglygvdfkRlsGpqwlykd 36 
                 v+ +p  +g++++df+R sG+q+ ++ 
  MMETSP1325-20131115|3697_1 421 VYSVPDePGMHLIDFQRRSGDQIDFLK 447
                 78888449***************9975 PP

>> PF07643.6  Protein of unknown function (DUF1598)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0069        19      59      79 ..     159     179 ..     148     183 .. 0.85
   2 ?    5.2   0.0     0.007        19      28      48 ..     376     396 ..     357     402 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0069
   PF07643.6  59 vLveADyrmKriaiGleeapv 79 
                 +L +ADy++K+   Gl   ++
  MMETSP1325-20131115|3697_1 159 LLLDADYQLKLADFGLAAINL 179
                 799********9999987765 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.007
   PF07643.6  28 niaelveglkqalGkQdvtvt 48 
                 ++ + v+++ ++lG Qdv+v+
  MMETSP1325-20131115|3697_1 376 DLMKSVNEMYEQLGAQDVSVK 396
                 556678999*********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       588  (0.0430076); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.89u 0.38s 00:00:01.27 Elapsed: 00:00:00.62
# Mc/sec: 1913.22
//
Query:       MMETSP1325-20131115|3718_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 346.62
//
Query:       MMETSP1325-20131115|3719_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0011   18.1   0.3     0.0045   16.1   0.0    1.9  2  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0     0.035   4.8e+02      59      71 ..      25      37 ..       4      56 .. 0.54
   2 !   16.1   0.0   3.3e-07    0.0045      83     126 ..     107     150 ..      93     163 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.035
                .XXXXXXXXXXXX CS
  PF00520.26 59 gllavlrllrvlR 71
                ++l+++r++rvl 
  MMETSP1325-20131115|3719_1 25 INLRLVRSIRVLT 37
                4444444444443 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 3.3e-07
                 XXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS----- CS
  PF00520.26  83 rtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkc 126
                 + l+  +++  + + + ++ll++ ++ faiig++lf+g+   + 
  MMETSP1325-20131115|3719_1 107 KGLWTNFTKLAPIIRRMAILLCVAIYPFAIIGMELFAGRNVPCP 150
                 5567788899999*************************976664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 811.83
//
Query:       MMETSP1325-20131115|3720_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|3723_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   14.8   2.8       0.38   10.8   0.9    2.3  2  PF08544.8  GHMP kinases C terminal
      0.042   14.0   0.7      0.042   14.0   0.5    1.5  2  PF03704.12 Bacterial transcriptional activator domain
       0.31   11.4   4.8       0.56   10.5   0.3    2.4  2  PF02672.10 CP12 domain


Domain annotation for each model (and alignments):
>> PF08544.8  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1    0.0048        22      28      54 ..      28      51 ..       3      56 .. 0.61
   2 ?   10.8   0.9   8.4e-05      0.38      24      79 ..      53     106 ..      42     109 .] 0.79

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0048
   PF08544.8 28 yvgilspelrellealeelGalgakls 54
                 +g + pe++++ +a+e+l    a+ s
  MMETSP1325-20131115|3723_1 28 KLGLSGPEVKAVTDAIEALE---AAAS 51
                46666677777777777776...4444 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 8.4e-05
   PF08544.8  24 eplayvgilspelrellealeelGalgaklsGaGgGptvfalfkdkddaeqvaral 79 
                 ++++++   s+++++++ a+ e++  g +lsGa  +++++a +k  ++ ++++ ++
  MMETSP1325-20131115|3723_1  53 TKKLEALAGSDSIDKIKAAMTEAD--GLGLSGAPEYAACAARVKALEEEKALIAEM 106
                 557777888999************..*****************8777777777665 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.74   3.4e+03      14      17 ..      15      18 ..       2      31 .. 0.42
   2 ?   14.0   0.5   9.3e-06     0.042       2      67 ..      41     106 ..      40     109 .] 0.92

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.74
  PF03704.12 14 rral 17
                ++a+
  MMETSP1325-20131115|3723_1 15 DSAA 18
                2222 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 9.3e-06
  PF03704.12   2 DvarferlvaagrralaagdpeeaarlleaalalwrGpaladvragpwleaererleelrlealea 67 
                 D+ +  +++a+g+++l+a + +  +++++aa+   +G  l++++++  + a++++lee+ + + e+
  MMETSP1325-20131115|3723_1  41 DAIEALEAAASGTKKLEALAGSDSIDKIKAAMTEADGLGLSGAPEYAACAARVKALEEEKALIAEM 106
                 777788889*************************************************99887776 PP

>> PF02672.10  CP12 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   0.00012      0.56      12      45 ..      22      55 ..      16      67 .. 0.77
   2 ?    2.9   0.2      0.03   1.4e+02       3      37 ..      66     100 ..      62     106 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00012
  PF02672.10 12 aeeacaeegansaecaaawdeveeLqaeashqre 45
                a+   ++ g + +e+ a++d++e L+a+as  ++
  MMETSP1325-20131115|3723_1 22 AQSEASKLGLSGPEVKAVTDAIEALEAAASGTKK 55
                4444555567779****************98776 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.03
  PF02672.10   3 ekiqkaikeaeeacaeegansaecaaawdeveeLq 37 
                 +ki++a+ ea     +++ + a caa   ++ee +
  MMETSP1325-20131115|3723_1  66 DKIKAAMTEADGLGLSGAPEYAACAARVKALEEEK 100
                 57888888888888888888888888777777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       385  (0.0281597); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 580.45
//
Query:       MMETSP1325-20131115|3722_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 1001.68
//
Query:       MMETSP1325-20131115|3724_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        56  (0.00409596); expected 273.4 (0.02)
Passed bias filter:                       53  (0.00387654); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 132.66
//
Query:       MMETSP1325-20131115|3726_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 334.59
//
Query:       MMETSP1325-20131115|3725_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00032   20.4   0.0    0.00052   19.7   0.0    1.3  1  PF10256.4  Golgin subfamily A member 7/ERF4 family
     0.0023   18.0   0.0     0.0038   17.2   0.0    1.4  1  PF00536.25 SAM domain (Sterile alpha motif)
  ------ inclusion threshold ------
      0.032   13.9   0.0      0.052   13.3   0.0    1.3  1  PF07647.12 SAM domain (Sterile alpha motif)
      0.062   12.5   0.0       0.11   11.8   0.0    1.4  1  PF07842.7  GC-rich sequence DNA-binding factor-like protein
        0.6    8.3   1.9        0.7    8.0   1.3    1.1  1  PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
          4    6.7  10.2        8.1    5.7   7.1    1.5  1  PF10500.4  Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF10256.4  Golgin subfamily A member 7/ERF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   2.3e-07   0.00052      16     110 ..     152     249 ..     141     258 .. 0.74

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 2.3e-07
   PF10256.4  16 pqFstsfPgeL...egriseeefeeivnkiNkllkeafepisrrnlienilavltlylsslll..eshskrklaklekyieelNeellhkrglklinprk 110
                 p+ ++++P  L   ++ +see+++e+v+++N+ lk+  ++ +  +l++   a l+l ++ l++  +  +k++   le   + +Ne+ + + g+k++   +
  MMETSP1325-20131115|3725_1 152 PKLDDQYPPCLtpwRSAVSEEDWSEFVENVNSELKKHRSNGTDVMLMGA--APLVLPVIGLVMrqTKREKKVKGVLEAAANRWNEQYTPRCGFKMVLDTR 249
                 56667788887444677********************777444444444..44445566666665666777888899999*****999999998876544 PP

>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   1.7e-06    0.0038       5      49 ..      20      65 ..      16      79 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.7e-06
                -SSHHHHHHHTT-GGGHHHHHCT--SHHHHTT--HHH.HHHH---- CS
  PF00536.25  5 vedVgeWLesiglgqYvdnFrageidgdallllteed.Leklgvtl 49
                v+  +   es+gl+q+v+  r++ id+ ++ +l ++d L +lg+ +
  MMETSP1325-20131115|3725_1 20 VDAAVALFESLGLHQHVEAVRHHGIDIPTMRELVDSDgLSELGIMS 65
                566666779****************************9999**976 PP

>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.3e-05     0.052      12      65 ..      26      79 ..      19      80 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.3e-05
                HHHHT--CCSHHHHHHHTS-SCTCCCSSCHHHHHCCCHHCHHHHHHHHHHHHCH CS
  PF07647.12 12 WLrsiglkqYtenFrdqgitggelllrlteedLkrlGitsvghrkkilkkiqel 65
                 ++s+gl+q++e+ r +gi+   + + ++ + L +lGi s+++  k+  +++++
  MMETSP1325-20131115|3725_1 26 LFESLGLHQHVEAVRHHGIDIPTMRELVDSDGLSELGIMSKIESSKVRAALKKM 79
                689******************6666*************9999988887777766 PP

>> PF07842.7  GC-rich sequence DNA-binding factor-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.6e-05      0.11     174     230 ..     134     188 ..      63     192 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.6e-05
   PF07842.7 174 lepgllaairrklrqaldaWdpsrsalagLkpWkdvfspaewdklllkhilpklara 230
                 + p   + + ++l +a ++ ++++  ++ L+pW++++s+++w+++++ ++  +l+++
  MMETSP1325-20131115|3725_1 134 ASP-YSHRVGMRLVNASRDPKLDDQYPPCLTPWRSAVSEEDWSEFVE-NVNSELKKH 188
                 444.6778889999999998889999********************9.777777765 PP

>> PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   1.3   0.00031       0.7     246     308 ..      71     131 ..      49     191 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00031
   PF07462.6 246 evkealeqykellPkgvtaeakvtavvtppsadaaaapdsvrpagasgaasgstsaptaesvl 308
                 +v+ al++ +   P ++ta+ ++t+    +s+ ++++++ + +a+a+gaa+ s  a+   s+ 
  MMETSP1325-20131115|3725_1  71 KVRAALKKMD--APNTSTAHNATTTTSLSSSSSSSSSSSPAAAAAAAGAAATSMGASMGASMS 131
                 5666666655..365555544444433333333333333334444444444444444444444 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   7.1    0.0035       8.1      53      77 ..      86     110 ..      55     122 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0035
   PF10500.4  53 kkkrrerssssssssssssssssss 77 
                 +++  + ++s sssssssssss++ 
  MMETSP1325-20131115|3725_1  86 TAHNATTTTSLSSSSSSSSSSSPAA 110
                 2222222234444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1140  (0.0833821); expected 273.4 (0.02)
Passed bias filter:                      694  (0.0507607); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.43s 00:00:01.11 Elapsed: 00:00:00.55
# Mc/sec: 1150.25
//
Query:       MMETSP1325-20131115|3730_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-08   34.1   0.1    2.6e-08   33.4   0.0    1.3  1  PF00293.23 NUDIX domain


Domain annotation for each model (and alignments):
>> PF00293.23  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.0   1.9e-12   2.6e-08       7     121 ..      84     206 ..      81     221 .. 0.82

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 1.9e-12
                 EEEEETTS.EEEEEEECSTTSSTTEEEESBEEETTTTSHHHHHHHHHHHHHHS-EE....EEEEEEEEEEEEETTCCC....SEEEEEEEEEEEEETGGGCSTTTS..TEEEEEEEEHHHHHHHHH CS
  PF00293.23   7 villnedg.kvLlvqrsrskltapglwefPgGkvdkgEspeeaAvRElkEEtGidl....ekvrlvgvanydaptddp....kreevifflaelpddepeiilntt..Evsevrwvpleelldlal 121
                 v+++ +dg kvLl +r+ ++  +p+ w f gG+ ++gE    aA+R ++ E+G++l     +v+  +++++ +++  p         ++  ++l+++e++ + +++  E  + +w + +e+l++  
  MMETSP1325-20131115|3730_1  84 VLIVSPDGkKVLLGRRKVEP--QPDFW-FIGGRARPGEQTCVAAARNVQRELGLALpphrYVVVASYSMVWAYRQQAPtengTADISTVHALTLTEEEATFDVQFDpkEYHDGQWWDMDEVLAAKE 206
                 889999999**********9..55555.88**************************5555444444455555555555888888889999999999999999999999************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1231.73
//
Query:       MMETSP1325-20131115|3731_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.66
# Mc/sec: 283.21
//
Query:       MMETSP1325-20131115|3732_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-05   24.5   0.0    1.5e-05   24.2   0.0    1.1  1  PF13193.1 Domain of unknown function (DUF4009)


Domain annotation for each model (and alignments):
>> PF13193.1  Domain of unknown function (DUF4009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.1e-09   1.5e-05      11      33 ..       6      28 ..       2      37 .. 0.81

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 1.1e-09
   PF13193.1 11 deLPKTrSGKIlRRlLRaialge 33
                d+LP T++GK+++ +L+a+++  
  MMETSP1325-20131115|3732_1  6 DALPATATGKVQKHVLKALVEDA 28
                99****************88733 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.43s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 235.43
//
Query:       MMETSP1325-20131115|3733_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|3727_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   12.3   0.6      0.061   12.3   0.4    1.9  2  PF10399.4 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
        3.6    7.7  11.4       0.39   10.7   0.2    3.3  3  PF10518.4 TAT (twin-arginine translocation) pathway signal sequence


Domain annotation for each model (and alignments):
>> PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   8.9e-06     0.061       7      31 ..      41      65 ..      36      66 .. 0.89
   2 ?   -4.1   1.0       1.3   8.6e+03      27      31 ..     138     142 ..     135     143 .. 0.40

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.9e-06
                -----HHHHHHHHHH---------H CS
   PF10399.4  7 keptRRDFLylATaavgaVGaaaaa 31
                ++ +RRD L  ++++ g+V a+a a
  MMETSP1325-20131115|3727_1 41 ENVDRRDMLAKTAGVLGGVFAGAQA 65
                6889******************965 PP

  == domain 2    score: -4.1 bits;  conditional E-value: 1.3
                 ----H CS
   PF10399.4  27 aaaaa 31 
                 aaaaa
  MMETSP1325-20131115|3727_1 138 AAAAA 142
                 33332 PP

>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2     0.016   1.1e+02       5      21 ..      10      26 ..      10      29 .. 0.82
   2 ?   10.7   0.2   5.7e-05      0.39       1      25 [.      42      66 ..      42      67 .. 0.92
   3 ?   -1.0   0.5      0.31   2.1e+03      12      16 ..     138     142 ..     135     144 .. 0.42

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.016
   PF10518.4  5 RqfLkggaaaaAaaalg 21
                R+f+ ++a +a a+a++
  MMETSP1325-20131115|3727_1 10 RSFIVALALLASASAFS 26
                88999999999888875 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 5.7e-05
   PF10518.4  1 rlsRRqfLkggaaaaAaaalggala 25
                ++ RR++L  +a++ +++++g+ +a
  MMETSP1325-20131115|3727_1 42 NVDRRDMLAKTAGVLGGVFAGAQAA 66
                588******************9997 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.31
   PF10518.4  12 aaaaA 16 
                 aaaaA
  MMETSP1325-20131115|3727_1 138 AAAAA 142
                 22222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       540  (0.0394968); expected 273.4 (0.02)
Passed bias filter:                      382  (0.0279403); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 881.68
//
Query:       MMETSP1325-20131115|3737_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-14   53.2   0.0    4.1e-14   52.9   0.0    1.0  1  PF00175.16 Oxidoreductase NAD-binding domain
  ------ inclusion threshold ------
      0.016   14.9   0.0      0.016   14.9   0.0    1.1  1  PF08030.7  Ferric reductase NAD binding domain
       0.12   11.1   0.0       0.15   10.7   0.0    1.1  1  PF04952.9  Succinylglutamate desuccinylase / Aspartoacylase family


Domain annotation for each model (and alignments):
>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.0   8.9e-18   4.1e-14       4      63 ..       3      65 ..       2      77 .. 0.88

  Alignments for each domain:
  == domain 1    score: 52.9 bits;  conditional E-value: 8.9e-18
                -----HHHHHHHHHHHCC.HCCCEEEEEEEESSGGGSTTHHHHHHHHHHSTTEEEEEEC..TT CS
  PF00175.16  4 GGtGiaplrsvlkalled.edetkvvlvyGvrteedlllreeleelakklpgrlkvvav..sr 63
                 G+G+ap++++++++l+   d+t++ lvyG+rte d+++r++le++++k+p+rl++v v  sr
  MMETSP1325-20131115|3737_1  3 VGSGVAPMVQIIEKVLSTpGDTTQICLVYGNRTEGDIMMRKQLEAWSRKYPKRLRLVFVigSR 65
                59**************9999********************************99999886644 PP

>> PF08030.7  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   3.6e-06     0.016       8      56 ..       2      45 ..       1      77 [. 0.85

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.6e-06
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF08030.7  8 agGiGitpfisilkdllkkskkealktkkikliwvvressslewfkdvL 56
                + G+G++p++ i+ ++l +      +t++i l+  +r ++++ + k  L
  MMETSP1325-20131115|3737_1  2 CVGSGVAPMVQIIEKVLSTPG----DTTQICLVYGNRTEGDIMMRK-QL 45
                89******************9....9***************98877.33 PP

>> PF04952.9  Succinylglutamate desuccinylase / Aspartoacylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.3e-05      0.15      11      50 ..      30      69 ..      26      74 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 3.3e-05
                -----HHHHHHHHHHHHHHHHHBESSCEEEEC-S-HHHHH CS
   PF04952.9 11 vHGnElaGvellrqllkqleeadilgeitlvplaNppAia 50
                v+Gn+++G ++ r+ l++++++ + + +++++++   +i+
  MMETSP1325-20131115|3737_1 30 VYGNRTEGDIMMRKQLEAWSRKYPKRLRLVFVIGSRYDID 69
                89*******************************9887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 406.34
//
Query:       MMETSP1325-20131115|3738_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0015   17.8   0.0     0.0015   17.8   0.0    1.1  1  PF07298.6 NnrU protein


Domain annotation for each model (and alignments):
>> PF07298.6  NnrU protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.1e-07    0.0015     130     165 ..       3      44 ..       1      66 [. 0.80

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.1e-07
   PF07298.6 130 glllwalvgvilidrr.rr.lgeawealkaktsvvpf....d 165
                  l++++l++v+ +drr r+  ge +++++++ts+vpf    d
  MMETSP1325-20131115|3738_1   3 LLVAHHLFSVWNGDRRlREqHGELFDQVESRTSIVPFaaivD 44 
                 689**************9999999************855550 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.74
# Mc/sec: 216.97
//
Query:       MMETSP1325-20131115|3729_1  [L=608]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-43  148.6   0.5    2.6e-43  148.3   0.3    1.1  1  PF00884.18 Sulfatase
     0.0051   16.0   0.0     0.0072   15.5   0.0    1.3  1  PF01663.17 Type I phosphodiesterase / nucleotide pyrophosphatase


Domain annotation for each model (and alignments):
>> PF00884.18  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.3   0.3   3.9e-47   2.6e-43       1     370 [.      30     443 ..      30     500 .. 0.79

  Alignments for each domain:
  == domain 1    score: 148.3 bits;  conditional E-value: 3.9e-47
                 -EEEEEEEST--CCHCCHB---SCS.SHHH.HHHHCSSEEESSEE-SCSSHHHHHHHHHHS--CCCH--HCCT..TT.......CBTTTTS--HHHHCC.CGT-EEEEE----TCGGGHHC.CCHH----CCC-....CCCCGGGCSC-EEETTTE.......S.GGGSHHHHHHHHHHHHH...HHCT.TSSEEEEEE--TTSSS----TTTTTSS-GGGS..........................................HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEEE-----GGGHHH-TT----HHHHHHCCBEEEEEEE----TT.EE-S-EEGGGHHHHHHHH---.........--TTST-----THHHH----.....S.TT..CCEEE.EEEECTB.CCCCCTS.CCCSCCCE..EET CS
  PF00884.18   1 pnvvliladdlgagdlglyggptrt.tpnl.drlaeegllftnfysaapltspsraalltgryphntgvtsnteygg.......gglprteetLpellk.qaGYntaaigkwhlgwlsrqs.vyknrGFdrflgfptgednlknpedveynnsvlr.......ppeggysdealldealefl...larn.dkPfflylatlgpHappyapdeyaekyatffddgeeka....................................rqleaylnsveyvDdaigrvlaaLeenglldnTlvvftSDHgasleegngplrggkgvnayeggtrvPllvwwpggkaprvseelvshvDlaptildlagi....lpkvegpkdrlldgksllptlegka.....qaddlkavrll.nsraivkagweavnldpadasgcs..ydl 370
                 pn+v+ l+dd+     g +  +  t +p+  + la++g +f+n+++++p + psr+++ltgr  hn    +++++g        ++ +   +++ + lk +aGY+t+ +gk+ + + s  + ++++ G+d +l+ ++g d+++ + d e++ +  +        ++  ys++++ +  + ++     ++ ++Pff+y+a+ + H+p+  p+++ ++   ++++ + ++                                        ++++++ +vDd+i+ v+a+ + +g+ d T+++ftSDHg +l  g+     +k+   y+ +trv llv++pg+ +  + ee+v ++Dlapt+l+lagi    +           dg s++p+l ++                + + r +v   ++ vn++ ++++ c+  yd 
  MMETSP1325-20131115|3729_1  30 PNIVFFLTDDQDVMLGGSFPTHGVTpMPKTnELLAANGATFSNMFVHTPICNPSRSETLTGRMFHNLK--QTGQFGPniwgmhvNETKVFDHSFVRSLKeDAGYATGHFGKYLNIMPSDFDlGAPA-GYDAWLA-NPGGDYIAPSFDTEGISDL-GyddgsweGTASDYSTAVIGNVSIAWIrkvVTEDpTRPFFAYIAPKAAHEPF-MPAPWYAE--AWDPSWPATEprdnpawnssydsradhpsdiasnpmlsetaatlitDIFKNRWRTLMSVDDVIAAVYAECQSLGVVDSTYFLFTSDHGFQL--GQFNMVMDKR-RVYDWDTRVHLLVAGPGIVPGSIIEEPVMNIDLAPTMLELAGIteihA------DLAEFDGHSVAPLLIDGHskateV---------TaGWRDTVFFEYYFVNTNEKCVQNCTteYDY 443
                 9**********999777777777777999967778*******************************99..444444477999*9555555555555555168************999888844444.7777777.4445555555555554433.269999999*********************66666**************965.55555443..23333333325556677778899999999999***********************************************************..6688888888.89*****************************************43330......335678888888888874322220.........3333444444555666666666666666444 PP

>> PF01663.17  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-06    0.0072     210     248 ..     294     337 ..     264     459 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.1e-06
                 HHHHHHHH--------TTTT-CCCEEEEEE-------B.....- CS
  PF01663.17 210 alrrvDraigqLlealdergllentniilvSDHGmadv.....l 248
                 +l +vD++i+  +++ ++ g+ ++t ++ +SDHG++        
  MMETSP1325-20131115|3729_1 294 TLMSVDDVIAAVYAECQSLGVVDSTYFLFTSDHGFQLGqfnmvM 337
                 8999*******************************977555552 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (608 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.92u 0.40s 00:00:01.32 Elapsed: 00:00:00.73
# Mc/sec: 1995.87
//
Query:       MMETSP1325-20131115|3736_1  [L=468]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-38  132.7   0.0    1.5e-38  132.3   0.0    1.1  1  PF00069.20 Protein kinase domain
    2.6e-14   52.8   0.0      4e-14   52.2   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.3   0.0   2.2e-42   1.5e-38      10     256 ..       9     283 ..       7     285 .. 0.86

  Alignments for each domain:
  == domain 1    score: 132.3 bits;  conditional E-value: 2.2e-42
                 ---EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH..-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH....HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E.........EE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST............HHHHHHHHHCCCHHTTS--GGGGCSHHH......HHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20  10 GsfGkVykakkkktgkkvAvKilkkeeekskkektavr.Elkilkkls..Hpnivkllevfeekdelylvleyveggdlfdllk....kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel.........kiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge............seedqleliekilkkkleedepksssks......eelkdlikkllekdpakRltaeeilk 256
                 G+fG+++++ +  tgk +++K++ k   +   + ++v  El++lk  s   ++++ ++e+f++++++y +++ + + d+fd++k    + + ls++++  i++ ++e+l+y+Hs+g +HrD+K+eN+L++ + +          k++DFGla++ ++++ + ++ +g++ +mAPE + ++ +     D WslG++ +e++ g++ f +             s+e+ +++  + l++ ++   +k             l ++++++l  d+++R  + e++ 
  MMETSP1325-20131115|3736_1   9 GKFGQIISCLNVRTGKLMILKKMAKAYVNTLGSLKRVAcELELLKAASevPKTLLPIHEMFQTSSHFYYIMDRYGC-DVFDFMKvgghSTEGLSYKNAVIIFRGVCEALAYVHSRGYAHRDVKSENVLIEYDTHEdgshlvtgvKLIDFGLACN-TTDDATRYEACGSKGFMAPEAIVRKVQNPLLLDSWSLGCLGFEIVLGRAWFTEVwfvffrdidhsgSDETLQRVDFRPLQNIVDDGFSK----CaskgteYHLLSMLRRMLVLDHTQRAYISEVCA 283
                 9************************98888777665557*******95556779********************99.*******999888999*************************************8888799****************9.9**********************999**********************88888877777667555433333333344444444433333....13345668999***************9999886 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.0   5.8e-18     4e-14      10     200 ..       9     207 ..       7     215 .. 0.78

  Alignments for each domain:
  == domain 1    score: 52.2 bits;  conditional E-value: 5.8e-18
                 -----EEEEEEETTTTSSEEEEEEEEECT.TSBHHHHHHHHHHHHHHHHT.-BT.TB--BEEEBESSSSEEEEEE---B--HHHHHHHT..GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET.........TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE.EEHHHHHHH---HHHHHHT CS
  PF07714.12  10 GafGkVvegtlkgekekkevkVavKtlke.saeeeekeefleeakimkkl.khp.nivkllgvctkeepllivteyvkgGdLlefLrkk..ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee.........ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEift 200
                 G+fG+++++      ++ ++ +  K+ k+  ++  + +++  e++++k+  + p  ++ ++ ++ ++++++ +++     d+ +f++    ++e l++k+ + +   ++++++y +s+ + Hrd+ + NvL+e           + vk+ DfGLa ++++d    ++ ea  +  +mapE++ +k+      D Ws G+l +Ei+ 
  MMETSP1325-20131115|3736_1   9 GKFGQIISCLNV---RTGKLMILKKMAKAyVNTLGSLKRVACELELLKAAsEVPkTLLPIHEMFQTSSHFYYIMDRYG-CDVFDFMKVGghSTEGLSYKNAVIIFRGVCEALAYVHSRGYAHRDVKSENVLIEYdthedgshlVTGVKLIDFGLACNTTDD---ATRYEACGSKGFMAPEAIVRKVqNPLLLDSWSLGCLGFEIVL 207
                 889999999888...556666666666662334445788888999999997555156667777778888888887543.3677777754337999**************************************8888998877678**********99333...33455667889******98877366889***********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.63
# Mc/sec: 1780.15
//
Query:       MMETSP1325-20131115|3740_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        75  (0.00548566); expected 273.4 (0.02)
Passed bias filter:                       71  (0.0051931); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.31s 00:00:00.64 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|3739_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.31    9.7   7.8       0.37    9.5   5.4    1.2  1  PF14362.1 Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.4   2.7e-05      0.37     119     183 ..      40     102 ..      18     113 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 2.7e-05
   PF14362.1 119 qeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpv 183
                 ++  a++q+q +a+++ + a++ a+++a ++ +++ ++ +++ e++ q+e++   + + +GkG +
  MMETSP1325-20131115|3739_1  40 AQSFAELQKQQRAQYERQQAQQMADLQASKKRRSKRERSLERREKAKQREAMR--EGKHPGKGRR 102
                 45556777777779999999999***************************994..6777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2035  (0.148844); expected 273.4 (0.02)
Passed bias filter:                      995  (0.0727765); expected 273.4 (0.02)
Passed Vit filter:                       147  (0.0107519); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.46s 00:00:01.03 Elapsed: 00:00:00.74
# Mc/sec: 385.36
//
Query:       MMETSP1325-20131115|3741_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.8   4.4      0.017   15.1   3.1    1.4  1  PF13339.1  Apoptosis antagonizing transcription factor
      0.026   13.8   2.4      0.026   13.8   1.7    2.5  2  PF13870.1  Domain of unknown function (DUF4201)
       0.17   11.5  13.0      0.025   14.2   4.2    2.0  2  PF07889.7  Protein of unknown function (DUF1664)
        1.8    8.0  15.4        1.5    8.3   2.7    2.2  2  PF02996.12 Prefoldin subunit
          2    8.5   8.6       0.77    9.8   0.9    2.4  2  PF04576.10 Zein-binding
        2.2    7.6   9.8        1.6    8.1   1.1    2.3  2  PF04521.8  ssRNA positive strand viral 18kD cysteine rich protein
        2.4    8.0  14.2       0.59   10.0   2.7    2.4  2  PF14282.1  FlxA-like protein
        3.6    7.2  17.4        1.1    8.9   3.1    2.3  2  PF12718.2  Tropomyosin like
        6.4    5.4  10.4        5.9    5.5   1.1    2.1  2  PF14362.1  Domain of unknown function (DUF4407)
        8.8    6.1  11.0        5.8    6.7   1.9    2.6  3  PF05377.6  Flagella accessory protein C (FlaC)


Domain annotation for each model (and alignments):
>> PF13339.1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   3.1   1.3e-05     0.017      36     129 ..      47     143 ..      42     147 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.3e-05
   PF13339.1  36 pqeealsefk....egneelqealksaekalkklldtlleLreaLleedkksseeeesesakkrkr....aktektsldelweelekleerlkpyrnsvldk 129
                 pq+ a++  +    ++ e+ q+++++++k+++kl+dtl ++ e+        +  e +++a + kr     +++  + + ++e+++k+ e+  + r+s++dk
  MMETSP1325-20131115|3741_1  47 PQKLAIEYKCdianSQLEQKQKEMDDTKKHSEKLIDTLKAVLEETD-----IRIAELKKDAYEFKRdivvGAENMRTGKTMAEKVQKYMEDKLKNRDSMIDK 143
                 55544444445555899*********************99999988.....344455566777888888888888899**********************99 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   4.9      0.18   2.5e+02      90     134 ..      60     101 ..       6     128 .. 0.68
   2 ?   13.8   1.7   1.9e-05     0.026       2      31 ..     135     164 ..     134     165 .] 0.94

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.18
   PF13870.1  90 eeeleelkkelkekeeklaklrkelykvklerdklrkenkklrqq 134
                 +++le+++ke   +++++++ +k +  +k+  +    ++++l+++
  MMETSP1325-20131115|3741_1  60 NSQLEQKQKE---MDDTKKHSEKLIDTLKAVLEETDIRIAELKKD 101
                 3334444444...44444444444444444444455555555554 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 1.9e-05
   PF13870.1   2 rkkrneisklrlklislkhqlakikeklkq 31 
                 ++++ +i+kl+lk+++ k q++k++++lkq
  MMETSP1325-20131115|3741_1 135 KNRDSMIDKLKLKNVTIKAQIQKVENQLKQ 164
                 68899***********************98 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   4.2   1.8e-05     0.025      44     117 ..      55     128 ..      48     136 .. 0.83
   2 ?    2.7   1.9     0.066        91      62     106 ..     118     163 ..     111     165 .] 0.71

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.8e-05
   PF07889.7  44 AvasvtkqlekvseavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLes 117
                  ++   +qle+ ++++ ++kkh  + id+l   l+e+   + e k++ +e ++d+    e++++ k++ e++++
  MMETSP1325-20131115|3741_1  55 KCDIANSQLEQKQKEMDDTKKHSEKLIDTLKAVLEETDIRIAELKKDAYEFKRDIVVGAENMRTGKTMAEKVQK 128
                 5777789*******************************99**************98777777766666665544 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.066
   PF07889.7  62 akkhLsqridn.lddkldeqkeiskeikeevteiredlsaikedvk 106
                 + k +++++++ ++dkl++   ++++ k +  +i+ +++++++++k
  MMETSP1325-20131115|3741_1 118 TGKTMAEKVQKyMEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQLK 163
                 5567777777557788888888887777777777888877777766 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   2.6    0.0081        11      70     117 ..      51      98 ..      47     101 .. 0.85
   2 ?    8.3   2.7    0.0011       1.5      76     116 ..     124     164 ..     119     165 .] 0.93

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0081
                 EEEEEHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH---HHHHHHHH CS
  PF02996.12  70 yveksleeAiellkkkleelekqlekleeeleklkdqittleanlaql 117
                 ++e++++ A   l++k +e++++ +  e+ +++lk+ ++++   +a+l
  MMETSP1325-20131115|3741_1  51 AIEYKCDIANSQLEQKQKEMDDTKKHSEKLIDTLKAVLEETDIRIAEL 98 
                 689999999999999999999999999999999999998887777665 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHHHHHHHH---HHHHHHH---HHHHHHH CS
  PF02996.12  76 eeAiellkkkleelekqlekleeeleklkdqittleanlaq 116
                 e+  ++ ++kl++ +++++kl+ +  ++k+qi+++e++l q
  MMETSP1325-20131115|3741_1 124 EKVQKYMEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQLKQ 164
                 77889********************************9987 PP

>> PF04576.10  Zein-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.9   0.00056      0.77      53      91 ..      62     100 ..      53     103 .. 0.90
   2 ?    2.6   0.7     0.095   1.3e+02      54      92 ..     123     161 ..     115     163 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00056
  PF04576.10  53 earqykrmaeekaeydeeelesledllakrekeiealek 91 
                 + +q ++ +++++++ e+ ++ l+++l + +  i++l+k
  MMETSP1325-20131115|3741_1  62 QLEQKQKEMDDTKKHSEKLIDTLKAVLEETDIRIAELKK 100
                 6789999***************************99987 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.095
  PF04576.10  54 arqykrmaeekaeydeeelesledllakrekeiealeke 92 
                 a++ ++++e+k +  +  +++l+   +   ++i+++e++
  MMETSP1325-20131115|3741_1 123 AEKVQKYMEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQ 161
                 566777788887777777777776666666666666665 PP

>> PF04521.8  ssRNA positive strand viral 18kD cysteine rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   1.1     0.027        37      72     110 ..      61      99 ..      48     109 .. 0.75
   2 ?    8.1   1.1    0.0011       1.6      68     102 ..     128     162 ..     118     165 .] 0.86

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.027
   PF04521.8  72 aqlseleleLekLerreeqLktqiqkltaaaklakaeke 110
                 +ql+++++e++  ++  e+L +  +++++++++  ae +
  MMETSP1325-20131115|3741_1  61 SQLEQKQKEMDDTKKHSEKLIDTLKAVLEETDIRIAELK 99 
                 578888888888888888888888888888777776654 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0011
   PF04521.8  68 awrsaqlseleleLekLerreeqLktqiqkltaaa 102
                 + ++++l++ +  ++kL+ ++ ++k+qiqk+ ++ 
  MMETSP1325-20131115|3741_1 128 KYMEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQL 162
                 567899************************88765 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   1.7     0.037        50      50      82 ..      46      78 ..      35      92 .. 0.77
   2 ?   10.0   2.7   0.00043      0.59      36      69 ..     132     164 ..     113     165 .] 0.79

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.037
   PF14282.1 50 qkqqqliqqQIqalqaQiaqlqsqqseeaqqsq 82
                  q+ +i+   +  ++Q+ q+q++ ++ ++ s+
  MMETSP1325-20131115|3741_1 46 LPQKLAIEYKCDIANSQLEQKQKEMDDTKKHSE 78
                556777888888889999999999888766554 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00043
   PF14282.1  36 kelssdeeltaeekqkqqqliqqQIqalqaQiaq 69 
                 ++l++ +++  ++++ +   i +QIq++++Q++q
  MMETSP1325-20131115|3741_1 132 DKLKN-RDSMIDKLKLKNVTIKAQIQKVENQLKQ 164
                 35666.88888999999***************99 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   6.5    0.0073        10      17      93 ..      61     138 ..      48     141 .. 0.84
   2 ?    8.9   3.1   0.00083       1.1      10      60 ..     114     164 ..     107     165 .] 0.87

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0073
   PF12718.2  17 eeleeklKeleqenekkEeeiksLqkKnqqlEeevekleeqlkeakekleekekkkteaealtrriq.lLEeeleese 93 
                  +le+k Ke+++++++ E+ i  L+  +++++  + +l+++  e k     ++++  + +++  ++q  +E+ l++ +
  MMETSP1325-20131115|3741_1  61 SQLEQKQKEMDDTKKHSEKLIDTLKAVLEETDIRIAELKKDAYEFKRDIVVGAENMRTGKTMAEKVQkYMEDKLKNRD 138
                 589999999999999999999999999999999999999999999999999999999999999999834777777766 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00083
   PF12718.2  10 enaqekaeeleeklKeleqenekkEeeiksLqkKnqqlEeevekleeqlke 60 
                 en+    + +e+  K +e++ ++++  i +L+ Kn ++  ++ k+e+qlk+
  MMETSP1325-20131115|3741_1 114 ENMRTGKTMAEKVQKYMEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQLKQ 164
                 55555566677888999********************************97 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   1.1    0.0049       6.7     184     219 ..      56      96 ..      39     109 .. 0.76
   2 ?    5.5   1.1    0.0043       5.9     113     166 ..     110     163 ..     105     165 .] 0.88

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0049
   PF14362.1 184 ykekkealdaaqaeletlkaqldaaqaelean.....krka 219
                 ++ ++++l+++q+e++++k++ ++ +++l+a       r a
  MMETSP1325-20131115|3741_1  56 CDIANSQLEQKQKEMDDTKKHSEKLIDTLKAVleetdIRIA 96 
                 67789999********************9977543332222 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0043
   PF14362.1 113 elkekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevq 166
                 ++ +++++  ++++++v+++ ++kl+++++ i++l+ ++ +++a++++ e++++
  MMETSP1325-20131115|3741_1 110 VVGAENMRTGKTMAEKVQKYMEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQLK 163
                 5677888899999******************************99999888765 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.7     0.033        46      12      41 ..      59      88 ..      50      90 .. 0.79
   2 ?    2.5   0.8     0.089   1.2e+02      16      42 ..      63      89 ..      61     110 .. 0.71
   3 ?    6.7   1.9    0.0042       5.8       5      38 ..     130     163 ..     125     165 .] 0.91

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.033
   PF05377.6 12 lstvvatvrkeleelsksvekikenvkdvl 41
                 +++++  +ke+++ +k  ek+  + k vl
  MMETSP1325-20131115|3741_1 59 ANSQLEQKQKEMDDTKKHSEKLIDTLKAVL 88
                566788899999999999999999999988 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.089
   PF05377.6 16 vatvrkeleelsksvekikenvkdvlk 42
                ++  +ke+++ +k  ek+  + k vl+
  MMETSP1325-20131115|3741_1 63 LEQKQKEMDDTKKHSEKLIDTLKAVLE 89
                455567777777777777777776664 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.0042
   PF05377.6   5 LEnklsklstvvatvrkeleelsksvekikenvk 38 
                 +E kl + +++++ ++ ++  ++++++k++++ k
  MMETSP1325-20131115|3741_1 130 MEDKLKNRDSMIDKLKLKNVTIKAQIQKVENQLK 163
                 79***************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2054  (0.150234); expected 273.4 (0.02)
Passed bias filter:                      733  (0.0536132); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.67u 0.41s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 732.22
//
Query:       MMETSP1325-20131115|3742_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   9.1e-123  410.4   0.1     1e-122  410.2   0.1    1.0  1  PF05091.7 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)


Domain annotation for each model (and alignments):
>> PF05091.7  Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.2   0.1  7.6e-127    1e-122     239     516 .]       2     281 ..       1     281 [. 0.98

  Alignments for each domain:
  == domain 1    score: 410.2 bits;  conditional E-value: 7.6e-127
   PF05091.7 239 faTDeiLallmcatrSvysWdivitkkgnklffdKrdgseidlltVnEtaaeppsed.eenkinspssLalEAtkinqnFaqqvllenek..kvqfdeenpfkeeeee....lasvaYrYRkfdLsdeeekpvelivRcevdavlknasgedqfvtikaLnEfdskaqg.vdWrkkLetqrGavlatElknNsnklarWtaqalLagadqlkLGfvsranprdaekHviLgvqtykpkdlAaqinlklsnaWgivrtivdlvmkqedgkyvllKdpnkpvirlyev 516
                 +aTD+iLa lm+++rSvy+Wdiv++k +++lffdKrd+s++d+ltV+Eta epp  + ++++in++++L+lEA+ inqnF+qq+l    +  + ++d +npf++eee     +asvaYrYRkf         +el++Rce++++++ ++ge+q++t  aLnE+dsk++  ++Wr+k+++qrGavlatElknNs+kla+Wtaq+++agadq+k+G+vsr++ +d+++H+iL++q ykp+++A+qi+l++ n+Wgi++++vd +++ edgkyv++Kdpnk+v+r+y+v
  MMETSP1325-20131115|3742_1   2 YATDAILAHLMACPRSVYPWDIVVQKLNGSLFFDKRDSSQFDYLTVSETAYEPPAASeDTESINTAEKLSLEASAINQNFTQQILRDASEgeRQEMDLPNPFYDEEESpgmePASVAYRYRKFMFAG-----IELVARCELHGTVT-KRGEKQYMTAYALNEWDSKMSAgIEWRQKIDQQRGAVLATELKNNSCKLAKWTAQSMIAGADQMKIGYVSRKSRTDPHHHQILATQFYKPHEFATQITLNVTNMWGIIKMLVDKFLSLEDGKYVIMKDPNKAVVRIYSV 281
                 79****************************************************998899*************************98877779**************99****************99.....8***********87.88*****************9988******************************************************************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.60
# Mc/sec: 1222.14
//
Query:       MMETSP1325-20131115|3744_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.81
# Mc/sec: 630.15
//
Query:       MMETSP1325-20131115|3745_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-05   23.3   0.0    2.8e-05   22.4   0.0    1.4  1  PF01053.15 Cys/Met metabolism PLP-dependent enzyme
     0.0003   19.7   0.0    0.00038   19.3   0.0    1.3  1  PF00155.16 Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> PF01053.15  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   4.1e-09   2.8e-05     140     367 ..      30     280 ..      13     282 .. 0.67

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 4.1e-09
                 TEEEEEEESSBTTTTB---HHHHHHHHHHC....S.S-EEEEE-TTTHH..HH..--GGG--.--EEE--TTTTT----S-----EEESE-...HHHHHHHHHHHHH---B--HHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTEEEEE-TTSTTSTTHHHHHHHSSGG..EEEEEESS-H........HHHHHHHHH-...SSSEESS-----S-EE..E-CCCTTTTTSHHHHHHH-.---TTEEEE CS
  PF01053.15 140 ntklvylEtptnpllkvvDieaiaklakkk....g.dvlvvvDntfasp..ll..qrpLelg.aDivvhSaTKylnGhsdvvgGvvvvkgk...eelakklkflqnalGavlspfdawlllrGlkTLslRverhsenAlklAefLekhpkvekvyYpgLeshpqhelakkqlkgfggvlsfelksee........eaakkfldkl...klfslaeslGgvesLi..shpatmthasipkeereaa.gvtddLvRl 367
                  t ++++E p+np +k++D++++a+ +++     g  +l++vD tfa    +l  +++L+ +   +v  S++K ++ ++++ +G++v++ +   ++l +  + + ++l  +    +   l+r    ++ R +r+ en ++ A  L +  k + + +    +  + e ak+ ++ +   +sf+l   +        + a++f+d l     f+  +s+G+ + L+  ++pat t  +i++e+++++     +L Rl
  MMETSP1325-20131115|3745_1  30 PTTVLFVEIPSNPDQKMPDLAQLAASCESYqaltGkSLLLLVDTTFAPSceVLgtIKALAPElSAMVFVSMSKSVS-RGETTAGALVANHTpgsRALLSASREMAEMLDVTARRDQMLRLCRNHTGVEERCQRAYENMVATADVLRRAVKAH-TGHDMPVTMVGAEHAKQGFTSS--TFSFNLPPPAgatpevkaALAQRFVDLLtedPAFKPCVSFGQDNGLVycTVPATSTQGAIKEEDKAKQaQGGVQLARL 280
                 5899*********************99987444434689*******977443322677877644688899999987.667778888877631113444444555555666666667777888888899999999999999999998875544.4455455556666666666555..677777554444566665344555554421157888888888888874346888888888877765431333456665 PP

>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   5.6e-08   0.00038     122     291 ..       4     180 ..       1     233 [. 0.81

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 5.6e-08
                 -EETTTTEE-HHHHHHHHTT--SS-E...EEE-SSS-S-------HHHH...HHHHHHHHHTT-EEEEEES-------.-HHHHHHHHHHH-S-EEEEE--CCCCTBGGG----EEEE-.....HHHHHHHHHCCTTTS...-----CCHHHHCTSHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF00155.16 122 lyseedfhldlealeealkeapegnkktkvvlvesphNPtGtvatleel...eklldlakkynlllfvDeaYagfvfgsldavatranveeepnllivgslsKafGlaGeRvGyilgna.....avvsqlrklsrpfls...ssllqaavaaalsdallkqseleemrqrlqkrrkelrde 291
                 ++  ++f+  +++ ++al+ +p    +t v++ve p+NP+ ++++l++l   ++ ++  + + lll+vD ++a  +        t+  +++e   ++  s+sK+ +      G++++n      a++s+ r ++  + +     ++ +++ +++  +++ q+  e+m+++   +r+ ++++
  MMETSP1325-20131115|3745_1   4 IQGDATFNGSIDEALDALAADPGSLRPTTVLFVEIPSNPDQKMPDLAQLaasCESYQALTGKSLLLLVDTTFAPSCEV----LGTIKALAPELSAMVFVSMSKSVSRGETTAGALVANHtpgsrALLSASREMAEMLDVtarRDQMLRLCRNHTGVEERCQRAYENMVATADVLRRAVKAH 180
                 55567888889999999999887777**********************9433445566677899********998876....346999999999**********99888889999998889999888888888877766666777777777777777777777777777766666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.41s 00:00:01.06 Elapsed: 00:00:00.59
# Mc/sec: 1259.10
//
Query:       MMETSP1325-20131115|3743_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-32  111.8   0.0    2.1e-32  111.5   0.0    1.1  1  PF13924.1 Lipocalin-like domain
  ------ inclusion threshold ------
      0.082   12.8   0.0       0.19   11.6   0.0    1.7  1  PF05452.6 Clavanin


Domain annotation for each model (and alignments):
>> PF13924.1  Lipocalin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.5   0.0   3.1e-36   2.1e-32       1     139 [.      39     172 ..      39     173 .. 0.87

  Alignments for each domain:
  == domain 1    score: 111.5 bits;  conditional E-value: 3.1e-36
   PF13924.1   1 vGtWkLvsfeskdpdgkevfypfGkspiGlliYtadgymsaqltstgrepfaseelatasdeelasalktylaysGryeveed..qvihhvevslvPnwvGteqeRtveldgdrltlklkptapslllggkssravltWeR 139
                 vG W+L  f  +++  + v +pfG++p+G+l+Yt+ g+ms q+++++  + +s e + ++dee+a+a+ +++aysG++e++++   vihhv+++++Pnwv t+ +R ve+d+d+ ++ +++ a +   g     ++++W+R
  MMETSP1325-20131115|3743_1  39 VGDWELDAFYIEKDGVGPVMHPFGQDPVGILLYTPGGRMSGQMMKSEADG-RSLE-EPKTDEEKAAAFLSVIAYSGHFEIDDEssAVIHHVKAATYPNWVNTDLTRSVEFDDDGKMILSTTDACP--PG---CITKIIWKR 172
                 79***********************************************9.3333.689****************************************************99988864443333..22...235667777 PP

>> PF05452.6  Clavanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.8e-05      0.19      16      44 ..      87     114 ..      81     133 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.8e-05
   PF05452.6  16 daksleerkaeeekvlrllgkvihgvgnl 44 
                 d +slee k++eek   +l  vi   g++
  MMETSP1325-20131115|3743_1  87 DGRSLEEPKTDEEKAAAFLS-VIAYSGHF 114
                 789*************9995.66666776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 753.14
//
Query:       MMETSP1325-20131115|3746_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-42  143.5   1.6    7.5e-42  143.1   1.1    1.2  1  PF00566.13 Rab-GTPase-TBC domain
  ------ inclusion threshold ------
       0.13   11.9   0.8       0.22   11.2   0.0    1.8  2  PF14141.1  YqzM-like protein


Domain annotation for each model (and alignments):
>> PF00566.13  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.1   1.1   1.1e-45   7.5e-42      73     214 .]       2     145 ..       1     145 [. 0.97

  Alignments for each domain:
  == domain 1    score: 143.1 bits;  conditional E-value: 1.1e-45
  PF00566.13  73 LeriLkayaiynpeigYcqGmnfiaallLlvvldeeeafwcfvsLl...nkklrdlfkpslpglqrdlqileellkkhdpelykhlekeeldlslfaikWfltlfvrelpletvlrlwD.lflegakflllrialailkllrkell 214
                 L+r+L+aya  + e+gYcqGm f  a++L ++++ee+afw + + +   +  +r++f+p++ + +  l ++++l+++++p+l+kh+e++++ +s+fa++W lt+f++++p++ v+ +wD +++eg k+ l r+++ +lk+++kell
  MMETSP1325-20131115|3746_1   2 LRRVLRAYAATDAEVGYCQGMGFFTAMFL-IYMPEEQAFWQLMHVMqraQSPIRGMFMPDMAETHLSLSVMDKLVRHFMPKLHKHFEDLGIVFSMFATHWYLTVFSSSFPFDFVTIVWDsFLAEGFKV-LHRVCVGLLKVFEKELL 145
                 9****************************.788**************************************************************************************666699999.**************997 PP

>> PF14141.1  YqzM-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.3e-05      0.22      14      34 ..      11      31 ..       7      33 .. 0.92
   2 ?   -3.6   0.1       1.3   8.8e+03      23      30 ..      91      98 ..      90     102 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.3e-05
   PF14141.1 14 aiDSgvGFivsFgfFallFii 34
                a D+ vG+    gfF+ +F+i
  MMETSP1325-20131115|3746_1 11 ATDAEVGYCQGMGFFTAMFLI 31
                5799***************99 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 1.3
   PF14141.1 23 vsFgfFal 30
                ++F +Fa+
  MMETSP1325-20131115|3746_1 91 IVFSMFAT 98
                67888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       400  (0.0292569); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.36s 00:00:00.94 Elapsed: 00:00:00.64
# Mc/sec: 988.50
//
Query:       MMETSP1325-20131115|3747_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.81
# Mc/sec: 381.64
//
Query:       MMETSP1325-20131115|3748_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   12.2   0.8      0.097   11.8   0.6    1.2  1  PF06589.6 Circumsporozoite-related antigen (CRA)


Domain annotation for each model (and alignments):
>> PF06589.6  Circumsporozoite-related antigen (CRA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.6   7.1e-06     0.097     107     149 ..      10      52 ..       4      70 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 7.1e-06
   PF06589.6 107 rPfkiGkskkgdsanadddsesnneespsPeevepeasklddd 149
                 +P ++G +k+g sa +++ s++ ++  +s  + e e+ + +++
  MMETSP1325-20131115|3748_1  10 HPARLGLGKRGHSAFTRARSQPASQSLASDSDSEHESVESEEE 52 
                 999****************999999888653333333333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       777  (0.0568315); expected 273.4 (0.02)
Passed bias filter:                      582  (0.0425688); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 373.28
//
Query:       MMETSP1325-20131115|3751_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        90  (0.0065828); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 153.73
//
Query:       MMETSP1325-20131115|3752_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 326.40
//
Query:       MMETSP1325-20131115|3749_1  [L=601]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-74  248.1   0.0    1.1e-73  247.5   0.0    1.1  1  PF08752.5  Coatomer gamma subunit appendage domain
      3e-20   71.9   0.0    4.8e-20   71.2   0.0    1.2  1  PF01602.15 Adaptin N terminal region
     0.0032   17.6   0.1     0.0092   16.1   0.1    1.8  1  PF13646.1  HEAT repeats
  ------ inclusion threshold ------
      0.035   14.0   5.6        3.2    7.9   0.1    3.3  4  PF02985.17 HEAT repeat
       0.42   11.1   2.9        2.6    8.6   2.0    2.5  1  PF13513.1  HEAT-like repeat


Domain annotation for each model (and alignments):
>> PF08752.5  Coatomer gamma subunit appendage domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.5   0.0   4.2e-77   1.1e-73       6     264 ..     266     526 ..     262     529 .. 0.95

  Alignments for each domain:
  == domain 1    score: 247.5 bits;  conditional E-value: 4.2e-77
   PF08752.5   6 aeelskipefaelGkllksskpieLTesetEYvVsvvkhifknhiVLqFnitNTLndqiLenVsvelepeekk.leelekipikkLkynepgslyvllekpedeedslsetfsntLkFtvkeidpstgep.esdegyeDeYsiedlelqisDfiqplrksnFkalWdeleeeseatetfsLsnvknlqeavkklvellgmqplegtdvve..enssshtlklsGkflngekVlvrarlalskekgvtlkitvRseseelsell 264
                 a+ + +ipe+ elG +++s+ p+eLTesetEYvV++vkhi ++h+VLqF++tNT+ +q L ++s+++e++e + ++e  +i+++kL y+ pgs++++l ++ +   s  ++f+++L+F v e+dp+tg++  +++g+e++Y++e l+l+ +D++ ++  ++F+++W+  +++++  e+f+L+++k+l++a ++++++lgmqp++g+ + +  ++ + h l+lsGkf+++  Vlvra l l ++ + +l+i+vRs++e ++e+l
  MMETSP1325-20131115|3749_1 266 AAAVYAIPELGELGRVFRSCAPVELTESETEYVVTCVKHILDEHVVLQFDVTNTIAEQRLVDLSMKVENSEPElYDEILSIKCDKLVYGVPGSCFTVLARNPEAPISH-ASFNCELEFRVVEVDPDTGDIeGDEDGFEENYPVETLDLNTADYMAKVSLGDFRRAWETTSSDCDVDEKFALQQFKKLEDALENVIDFLGMQPCDGSGKINhaKKGAPHPLYLSGKFVGNVPVLVRAMLQL-TDGTMILRICVRSQDEAVNEWL 526
                 567889*****************************************************************777***************************9998887.7********************54568***********************************************************************99873355568***********************.99999*************9987 PP

>> PF01602.15  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.0   1.8e-23   4.8e-20     381     519 ..       9     141 ..       2     144 .. 0.91

  Alignments for each domain:
  == domain 1    score: 71.2 bits;  conditional E-value: 1.8e-23
  PF01602.15 381 ellslsgeyv.kdeivevirdiiqkvpelhekivekLaellekiespearaaaiWllGeygelventesasdllrslaekfvlesekvklailtalvKlsltspdketqeeliqlvlslatqdssdlelrdRaveylqll 519
                   l+ +g++  k++i ++i ++++  pe +e+++ +L+e++e++e++++ +++++l+G  g+ ++    +++++r ++++++le+++v++a ++al ++  + p   ++++++ l+ + +   ++d+e+rdRa+  l  l
  MMETSP1325-20131115|3749_1   9 ATLREEGGFEfKKAITDSIVELMHAIPETKESSLLHLCEFIEDCEFTALSTQILHLIGSLGPTTQA---PARYIRFIYNRVILENAQVRAASISALSRFASQVP--GIRRSVCVLLSRSLL--DEDDEVRDRATVALAAL 141
                 555555543349*****************************************************9...**********************************9..7999***********..99********9887765 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   3.4e-06    0.0092      43      87 ..      89     138 ..      44     153 .. 0.59

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.4e-06
   PF13646.1  43 sdpevRraAaeaLgkl.....gdpealpaLlklldddedavvreaaaeaL 87 
                 +++ vR+a + aL+++     g ++++ +Ll +   ded+ vr  a+ aL
  MMETSP1325-20131115|3749_1  89 ENAQVRAASISALSRFasqvpGIRRSVCVLLSRSLLDEDDEVRDRATVAL 138
                 55556666666666653322223444444444433344444455555554 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       3.9   1.1e+04      14      31 .]      35      52 ..      31      52 .. 0.73
   2 ?    7.9   0.1    0.0012       3.2      12      30 ..      89     107 ..      89     108 .. 0.90
   3 ?    7.2   0.4    0.0021       5.7       6      27 ..     120     141 ..     115     142 .. 0.85
   4 ?   -3.8   0.0         5   1.4e+04      18      28 ..     266     276 ..     266     277 .. 0.79

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 3.9
                HHHHHHHHHHHHHHHHCS CS
  PF02985.17 14 peVReaAaeaLgalaevl 31
                pe +e+++  L++++e +
  MMETSP1325-20131115|3749_1 35 PETKESSLLHLCEFIEDC 52
                667778888888887765 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0012
                 SSHHHHHHHHHHHHHHHHC CS
  PF02985.17  12 pspeVReaAaeaLgalaev 30 
                 ++++VR+a+++aL+++a++
  MMETSP1325-20131115|3749_1  89 ENAQVRAASISALSRFASQ 107
                 6899************986 PP

  == domain 3    score: 7.2 bits;  conditional E-value: 0.0021
                 HHHHTSSSHHHHHHHHHHHHHH CS
  PF02985.17   6 lkllnDpspeVReaAaeaLgal 27 
                  + l D++ eVR+ A+ aL+al
  MMETSP1325-20131115|3749_1 120 SRSLLDEDDEVRDRATVALAAL 141
                 46788*************9987 PP

  == domain 4    score: -3.8 bits;  conditional E-value: 5
                 HHHHHHHHHHH CS
  PF02985.17  18 eaAaeaLgala 28 
                 +aA++a+ +l 
  MMETSP1325-20131115|3749_1 266 AAAVYAIPELG 276
                 59999998886 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.0   0.00094       2.6       2      55 .]      92     141 ..      91     141 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00094
   PF13513.1   2 rvRraAawaLGrlaggeprllepavpellpaLlelLedddd.eVReaAawALgrl 55 
                 +vR+a++ aL+r a + p   + +   l   Ll     d+d eVR+ A  AL++l
  MMETSP1325-20131115|3749_1  92 QVRAASISALSRFASQVPGIRRSVCVLLSRSLL-----DEDdEVRDRATVALAAL 141
                 79********88776666666655556666666.....6666****999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.95u 0.35s 00:00:01.29 Elapsed: 00:00:00.76
# Mc/sec: 1895.01
//
Query:       MMETSP1325-20131115|3735_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-20   70.4   0.1    9.3e-20   70.2   0.1    1.1  1  PF02271.11 Ubiquinol-cytochrome C reductase complex 14kD subunit


Domain annotation for each model (and alignments):
>> PF02271.11  Ubiquinol-cytochrome C reductase complex 14kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.1   6.8e-24   9.3e-20       9     104 ..      21     118 ..      13     119 .. 0.93

  Alignments for each domain:
  == domain 1    score: 70.2 bits;  conditional E-value: 6.8e-24
                 HHHHHHHHHHHH..H---TT----HHHHS---SHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHTT----GGGS--TTT---SSHHHHHHHHHHHHHHH CS
  PF02271.11   9 kllkplaklyvn..asgyrklGLradDlleeesedvqeAlrRLpreesyarvfRlkrAlqlslshqlLpkeewtkqeedvpYLspyikevekeakere 104
                 ++ + +a++y +  + +++++GL++dD+l+e ++dv+ Al+R+p + + ar+ RlkrAl++s +++ Lp + + + +  +pY++ +++e+++ + ere
  MMETSP1325-20131115|3735_1  21 NVWNSVARVYQAgvVQRLNQYGLKYDDILNESDPDVKLALSRMPVDLQVARDRRLKRALDISFKKKPLPMDFQKTLTPLEPYMESIVDEMKALRLERE 118
                 56677888887777889*****************************************************************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 606.43
//
Query:       MMETSP1325-20131115|3753_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|3750_1  [L=431]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   14.8   0.1      0.095   13.1   0.1    1.9  1  PF05564.7  Dormancy/auxin associated protein
      0.094   11.5   4.2       0.16   10.8   2.9    1.2  1  PF00937.13 Coronavirus nucleocapsid protein
       0.46   10.0   9.7       0.79    9.3   6.7    1.2  1  PF08648.7  Protein of unknown function (DUF1777)


Domain annotation for each model (and alignments):
>> PF05564.7  Dormancy/auxin associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   2.1e-05     0.095      39      80 ..     100     141 ..      67     173 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.1e-05
   PF05564.7  39 kekvqrsisikk..sspaspatsttPtsplsarkenvwrsvfhP 80 
                 ++ vq  + + +  ++p++p+t++tP +p + +   v  s ++P
  MMETSP1325-20131115|3750_1 100 EAVVQTHLKVLAllTPPSTPSTPSTPSTPSTEAA--VSASQLRP 141
                 2234444444447778999999999988866553..45566655 PP

>> PF00937.13  Coronavirus nucleocapsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.9   3.4e-05      0.16     163     190 ..     329     356 ..     308     370 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 3.4e-05
  PF00937.13 163 grSrsssrss..srsqsRsssrsksrsnsn 190
                 +rSrs srs   srs+sR+ s  +sr++s+
  MMETSP1325-20131115|3750_1 329 ARSRSRSRSLerSRSESRERS--RSRDSSR 356
                 222222222211333333333..2233333 PP

>> PF08648.7  Protein of unknown function (DUF1777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   6.7   0.00017      0.79      22      61 ..     330     356 ..     320     361 .. 0.40

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00017
   PF08648.7  22 rrrgrsrdRdrreRereRsrsreRdrarrrsRsrderrsr 61 
                 r+r+rsr+ + r R+ +R+rsr+Rd             sr
  MMETSP1325-20131115|3750_1 330 RSRSRSRSLE-RSRSESRERSRSRDS------------SR 356
                 2222222222.222223333333332............11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.33s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 2245.28
//
Query:       MMETSP1325-20131115|3756_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 555.95
//
Query:       MMETSP1325-20131115|3758_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|3757_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-09   34.9   0.0      1e-08   34.3   0.0    1.3  1  PF01479.20 S4 domain
  ------ inclusion threshold ------
      0.082   12.0   0.4       0.11   11.6   0.2    1.1  1  PF04935.7  Surfeit locus protein 6


Domain annotation for each model (and alignments):
>> PF01479.20  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   1.5e-12     1e-08       3      44 ..      57      98 ..      55     101 .. 0.92

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 1.5e-12
                HHHHHHHHH--SSHHHHHHHHHTT-EEE---B---TT-BE-T CS
  PF01479.20  3 LDkvLarlglassrseArqlIehGhVrVNGkvvkdpsyrVkp 44
                + ++L++l +a+s+ eAr+lI++G+ rV+G++v d ++ ++ 
  MMETSP1325-20131115|3757_1 57 VVDILVELSFAKSKGEARRLIKGGGARVDGVKVEDEAMLLQT 98
                5789********************************999875 PP

>> PF04935.7  Surfeit locus protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   1.6e-05      0.11     137     166 ..      82     111 ..      79     116 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.6e-05
   PF04935.7 137 akaeGvKvkDDekLLkkalkrkekqkkksk 166
                 a++ GvKv D+  LL+  l + ek+ + s+
  MMETSP1325-20131115|3757_1  82 ARVDGVKVEDEAMLLQTELLKGEKEIRVSS 111
                 6899********************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 609.07
//
Query:       MMETSP1325-20131115|3762_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 300.63
//
Query:       MMETSP1325-20131115|3760_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-48  161.5   0.0    7.7e-48  161.3   0.0    1.1  1  PF00179.21 Ubiquitin-conjugating enzyme
     0.0056   16.3   0.0     0.0079   15.8   0.0    1.4  1  PF14461.1  Prokaryotic E2 family B
  ------ inclusion threshold ------
      0.027   12.5   0.0       0.03   12.3   0.0    1.0  1  PF05044.7  Homeobox prospero-like protein (PROX1)
      0.045   13.5   0.0      0.068   12.9   0.0    1.4  1  PF05773.17 RWD domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.3   0.0   2.3e-51   7.7e-48       1     138 [.       9     144 ..       9     146 .. 0.97

  Alignments for each domain:
  == domain 1    score: 161.3 bits;  conditional E-value: 2.3e-51
                 HHHHHHHHHHHS-TTCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-.----B-HGGGSTTT--TT--HHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
  PF00179.21   1 rlqkelkelskkkpegikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvd.etGeicldiLkeekWspaltlesvLlsiqsllaepnpesplnkeaakllkknreeykkkvke 138
                 r++kel+e+++++++g+++ v e  n  +++++i+gp++t+Y gg+Fk++i +p+ YPf+PPk+kfvtki+HPnv+ +tG icldiLk++ Wspalt+++ Lls+q+ll++p+p++p+++e+a+++k++ e ++++++ 
  MMETSP1325-20131115|3760_1   9 RIRKELTEIQRDTKSGVSVAVLE--NNHHLEGTITGPDDTCYTGGVFKVDIVIPDGYPFEPPKMKFVTKIWHPNVSsQTGAICLDILKDQ-WSPALTIKTALLSLQALLCSPEPDDPQDAEVANMYKSDIELFTQTARF 144
                 799*******************9..689************************************************************88.*******************************************99976 PP

>> PF14461.1  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.3e-06    0.0079      34      98 ..      49     109 ..      16     139 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.3e-06
   PF14461.1  34 dggtipirlvipdefplvlpkvfladklearllpHvese.gaLCllerpsanwdpndlaslaeslr 98 
                 +gg++ + +vipd +p ++pk   + k    + p v+s+ ga+Cl   + ++w p  l + +++l+
  MMETSP1325-20131115|3760_1  49 TGGVFKVDIVIPDGYPFEPPKMKFVTK---IWHPNVSSQtGAICLDILK-DQWSPA-LTIKTALLS 109
                 899************************...888889999******9999.9**994.333333333 PP

>> PF05044.7  Homeobox prospero-like protein (PROX1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.9e-06      0.03     705     796 ..      19     109 ..       4     134 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.9e-06
   PF05044.7 705 qsasagveppgprvPvslplasaipntslhdaevfaalsqllqsagyPhesphlgqPsaaqqmkvsssppgil.allddrdsPpLphpptsLh 796
                 +++++gv+    +   +l+ + + p  +    +vf    +++ + gyP+e+p +   +++ + +vss+   i   +l+d+ sP L+ +++ L 
  MMETSP1325-20131115|3760_1  19 RDTKSGVSVAVLENNHHLEGTITGPDDTCYTGGVF--KVDIVIPDGYPFEPPKMKFVTKIWHPNVSSQTGAIClDILKDQWSPALTIKTALLS 109
                 55566666666665666666666677777888888..668999*************************9998889***********9998775 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     2e-05     0.068      50      91 ..      52      96 ..      10     114 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2e-05
                xxxxxxxxxxxxxxxxxxxxxxxx.xxxx..xxxxxxxxxxxxxx RF
  PF05773.17 50 sleleirlpedYPeeaPiitlsst.elsl..kelrkrleekleel 91
                 ++++i +p +YP e+P++++ ++ ++     ++ + + + l+++
  MMETSP1325-20131115|3760_1 52 VFKVDIVIPDGYPFEPPKMKFVTKiWHPNvsSQTGAICLDILKDQ 96
                7999****************7665133335544444455555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 973.52
//
Query:       MMETSP1325-20131115|3764_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 343.83
//
Query:       MMETSP1325-20131115|3765_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0098   15.6   0.0       0.73    9.7   0.0    2.8  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   5.3e-05      0.73       8      39 .]     118     148 ..     111     148 .. 0.83
   2 !    2.9   0.0    0.0072        99      15      29 ..     171     185 ..     162     193 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 5.3e-05
                 ESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   8 rgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 r H+s+  +vafsp    la +  D  ++l d
  MMETSP1325-20131115|3765_1 118 RFHQSALFDVAFSPA-MKLAACAGDTGVKLVD 148
                 5699***********.8888888889999866 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.0072
                 EEEEEESSSTEEEEE CS
  PF00400.27  15 tcvafspdgpllasg 29 
                 + v +spdg++l  g
  MMETSP1325-20131115|3765_1 171 SKVGWSPDGQILTVG 185
                 5688****9998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1382.90
//
Query:       MMETSP1325-20131115|3763_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-11   41.9   0.0    3.8e-11   41.6   0.0    1.1  1  PF06046.8 Exocyst complex component Sec6


Domain annotation for each model (and alignments):
>> PF06046.8  Exocyst complex component Sec6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   2.8e-15   3.8e-11     402     497 ..       2     113 ..       1     129 [. 0.85

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 2.8e-15
   PF06046.8 402 qivetiedYleDyqeylspelfqvlleelldelvleYlralle.kklkfkakkkrkqfaeklkrDaeqlyqffeklg..........daakllsklrvleklldll.....e 497
                 ++++t +dY+eD++ +l + +f  l+ ++++++v++Y++ l +  ++  +  +k +++a+ +++D +++++ff+++            +  ++++++vl++++  +     +
  MMETSP1325-20131115|3763_1   2 TVAATYRDYFEDLRTWLPEYFFCKLCRQCFEQVVVRYVEDLVShARVGKRPFQKPESAAKSIRSDRQEIFDFFSEYEdeleqagirpPKMSIEERVEVLDWISVVVetvpnD 113
                 6899**************************************97444445678999*********************99999999888888999999999999888333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      488  (0.0356934); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.40s 00:00:00.98 Elapsed: 00:00:00.60
# Mc/sec: 1002.48
//
Query:       MMETSP1325-20131115|3767_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0058   16.4   0.0      0.017   14.9   0.0    1.8  2  PF13950.1 UDP-glucose 4-epimerase C-term subunit


Domain annotation for each model (and alignments):
>> PF13950.1  UDP-glucose 4-epimerase C-term subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         1   1.4e+04      21      29 ..       4      12 ..       3      12 .. 0.80
   2 !   14.9   0.0   1.2e-06     0.017      25      46 ..      72      93 ..      67      99 .. 0.90

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 1
   PF13950.1 21 DvaecyAdp 29
                Dva++ A p
  MMETSP1325-20131115|3767_1  4 DVAALLAAP 12
                899998875 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 1.2e-06
   PF13950.1 25 cyAdpskAekeLgWkaerslee 46
                +y d skA+++LgW++++slee
  MMETSP1325-20131115|3767_1 72 FYVDVSKAKSTLGWSPSHSLEE 93
                799*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 626.32
//
Query:       MMETSP1325-20131115|3770_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-08   31.1   0.1    9.1e-08   31.1   0.0    1.0  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0   6.7e-12   9.1e-08     219     266 ..       7      52 ..       5      56 .] 0.94

  Alignments for each domain:
  == domain 1    score: 31.1 bits;  conditional E-value: 6.7e-12
  PF00248.16 219 eelselakehgvslaqlalryalsrpavgsvipgassieqleenlkal 266
                 ++l+e+a++h  s+aq+ lr+ l  + +g+ + ++s +e+l+en+++l
  MMETSP1325-20131115|3770_1   7 AALREVAAKHQRSVAQVTLRWHL--QTGGAYVAKSSAPERLRENIDVL 52 
                 5799*******************..9********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 235.43
//
Query:       MMETSP1325-20131115|3769_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.4e-39  132.3   0.0    9.1e-39  132.0   0.0    1.1  1  PF13288.1 DXP reductoisomerase C-terminal domain
  ------ inclusion threshold ------
       0.03   12.4   0.0      0.035   12.2   0.0    1.2  1  PF07245.6 Phlebovirus glycoprotein G2


Domain annotation for each model (and alignments):
>> PF13288.1  DXP reductoisomerase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.0   0.0   1.3e-42   9.1e-39       1     121 []      16     140 ..      16     140 .. 0.94

  Alignments for each domain:
  == domain 1    score: 132.0 bits;  conditional E-value: 1.3e-42
   PF13288.1   1 LgvpDMrlPIayaLayperlesgv....erldlaklgsLtFeepdlerFpclklayealeaggtapavlnaAnEvaveaFlegkisFldIaklvekvlekvesesveeesleeileadaeaRela 121
                 Lg+pDMrlPI y++a+p+r+ +++    ++l+l++lgs+tF++pd++++pc++lay+a++ ggt++ +lnaAnE a e F  g  ++  Iak+ve++++++++e  ++++le+ile+d++aR+++
  MMETSP1325-20131115|3769_1  16 LGWPDMRLPILYSIAWPHRIAMPTgqfeRPLNLVELGSMTFKAPDTDKYPCIQLAYDAGRIGGTMTGCLNAANEEANELFRGGAFNYEGIAKVVEETMNAHKKEMKANPDLESILEVDQWARRYV 140
                 8******************866432233789************************************************************************9669***************985 PP

>> PF07245.6  Phlebovirus glycoprotein G2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.1e-06     0.035     159     211 ..      25      80 ..      20     123 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.1e-06
   PF07245.6 159 vfncidwvhrlslevtdfdgkvelvslgasstkfln...wGslslsldaeGisGtn 211
                 ++  i+w hr+++   +f++  +lv+lg+++ k  +   + ++ l+ da  i Gt 
  MMETSP1325-20131115|3769_1  25 ILYSIAWPHRIAMPTGQFERPLNLVELGSMTFKAPDtdkYPCIQLAYDAGRIGGTM 80 
                 67789*************************998754223889*******9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 762.92
//
Query:       MMETSP1325-20131115|3772_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-13   48.4   0.9    8.9e-13   48.1   0.6    1.1  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
    9.1e-06   25.5   0.3    1.3e-05   25.0   0.2    1.3  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
     0.0012   17.9   0.1     0.0012   17.8   0.1    1.1  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
     0.0032   16.7   0.2     0.0038   16.5   0.1    1.1  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
     0.0051   17.0   0.4     0.0069   16.6   0.3    1.3  1  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
  ------ inclusion threshold ------
      0.055   12.9   0.1      0.062   12.7   0.1    1.1  1  PF01262.16 Alanine dehydrogenase/PNT, C-terminal domain
       0.11   12.3   0.1       0.13   12.1   0.0    1.2  1  PF02254.13 TrkA-N domain


Domain annotation for each model (and alignments):
>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.6   4.6e-16   8.9e-13       1      60 [.      38     101 ..      38     104 .] 0.81

  Alignments for each domain:
  == domain 1    score: 48.1 bits;  conditional E-value: 4.6e-16
                 EEEEE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHHHHHTT....CH.....HHHH CS
  PF02737.13   1 kvaVvGaGtmGagiAavfaragleVvlvdiseealekaleriekslekl....vekgklkeeev 60 
                 kv+ vG G+mG+giA++ a++g+eVv+v+++++al+ +++rie slek+    ++kgkl+e+++
  MMETSP1325-20131115|3772_1  38 KVGMVGLGLMGHGIAQISAQSGYEVVAVETNQAALDLGQKRIEGSLEKIyskmAAKGKLTEDDA 101
                 799***************************************9977766000045555555555 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.2   6.8e-09   1.3e-05       2      38 ..      37      73 ..      36      96 .. 0.86

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 6.8e-09
                BEBEEB-------HHHHHHHH---EEEE--SSHHHHH CS
  PF03446.10  2 kkigfiGlGvMGspmalnllkagyevavynrtkekve 38
                kk+g++GlG MG+ +a+  +++gyev++++ ++++++
  MMETSP1325-20131115|3772_1 37 KKVGMVGLGLMGHGIAQISAQSGYEVVAVETNQAALD 73
                79****************************9988776 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1   6.3e-07    0.0012      35      89 ..      35      87 ..       9      92 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 6.3e-07
                GGSEEE-B-------HHHHHHHH---EEEE--SS--...HHHH---EE-.-CCCCC CS
  PF02826.14 35 sgktvGiiGlGrIGqavakrlkafgmkvlaydrskkkeeeeeelgaevv.sleell 89
                + k+vG +GlG +G+ +a++ ++ g +v+a+++++ + + + ++  +++ sle+++
  MMETSP1325-20131115|3772_1 35 EIKKVGMVGLGLMGHGIAQISAQSGYEVVAVETNQAALD-LGQK--RIEgSLEKIY 87
                5599***************************99976444.2222..3333666655 PP

>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   1.9e-06    0.0038       2      59 ..      38      91 ..      37     103 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.9e-06
                EEEEE------------TTT---EEE---S-HHHHHHHH----SS-----HHHHH--- CS
   PF03721.9  2 kiaviGlGYvGlptavvlaekghevvgvDineekvdklnsgkipiyEpgleellkknv 59
                k++++GlG  G   a + a+ g evv v++n++  d  ++      E +le+++ k  
  MMETSP1325-20131115|3772_1 38 KVGMVGLGLMGHGIAQISAQSGYEVVAVETNQAALDLGQKRI----EGSLEKIYSKMA 91
                89******************************9988765544....344444444444 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.3   3.5e-06    0.0069       1      41 [.      38      74 ..      38      98 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 3.5e-06
  PF03807.12  1 kigiiGaGnigealakglaaagaqkheviiaasrspekaee 41
                k+g +G G +g+++a+  a++g   +ev+ a + ++  +  
  MMETSP1325-20131115|3772_1 38 KVGMVGLGLMGHGIAQISAQSG---YEVV-AVETNQAALDL 74
                79********************...****.54666655554 PP

>> PF01262.16  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   3.2e-05     0.062      16      69 ..      32      85 ..      21     101 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.2e-05
                --B---EEEEE-------HHHHHHHH---EEEE--SSTTHHHHHHH----BSSS CS
  PF01262.16 16 ggvkpakvvviGaGvvGlgAievakglgaevvaldkrperleqveslgaefvev 69
                   +  kv  +G G  G g +++  + g evva+++++++l  +++   + +e 
  MMETSP1325-20131115|3772_1 32 AVTEIKKVGMVGLGLMGHGIAQISAQSGYEVVAVETNQAALDLGQKRIEGSLEK 85
                44444789999****************************998877776666655 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   6.6e-05      0.13       4      35 ..      42      73 ..      39     100 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.6e-05
                E---HHHHHHHCCCHH.--..EEEEES-HHHHH CS
  PF02254.13  4 iGlGrvGrslaeeLre.gekdvvvidkdeerve 35
                +GlG +G  +a+   + g+ +vv++++++++++
  MMETSP1325-20131115|3772_1 42 VGLGLMGHGIAQISAQsGY-EVVAVETNQAALD 73
                8***************666.6*******98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.65
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|3774_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 312.38
//
Query:       MMETSP1325-20131115|3768_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       585  (0.0427882); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.55
# Mc/sec: 1755.88
//
Query:       MMETSP1325-20131115|3771_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0012   18.1   0.0     0.0018   17.6   0.0    1.2  1  PF14283.1 Domain of unknown function (DUF4366)


Domain annotation for each model (and alignments):
>> PF14283.1  Domain of unknown function (DUF4366)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.3e-07    0.0018     111     212 ..     177     288 ..     171     296 .. 0.55

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.3e-07
   PF14283.1 111 lalmeeeeaeaetaakeackvaekeaeeaae.vepepekeeeeepek........ksglgvlllvlvva.lagGGaayYfKfikpkqaekeaededldeedkgdedeeeede 212
                 ++ ++e+  e+++ +  +++ +e+++e+ ++   p+p ++++e ++         + gl + ++ +v+  l ++Ga+++fK +  k    ++ +++++  d +  d+  ++ 
  MMETSP1325-20131115|3771_1 177 ISAIQEGGGESAVFSSASVTSTEVTVETRKPsPLPTPSPSAAEGDDDdslenvlaQAGLLFGVTAAVLTvLTAAGAYWWFKCRSGKGTRRKEWENEMEMGDVYYTDDGAKKG 288
                 55666666666665555555555554444433566666666655544445444333333332233333336777*********99999888777766666544444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.40s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1394.24
//
Query:       MMETSP1325-20131115|3777_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 400.77
//
Query:       MMETSP1325-20131115|3778_1  [L=329]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-39  135.8   0.0    1.9e-39  135.4   0.0    1.1  1  PF10149.4 Transmembrane protein 231


Domain annotation for each model (and alignments):
>> PF10149.4  Transmembrane protein 231
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.4   0.0   1.4e-43   1.9e-39      13     312 ..       3     310 ..       1     313 [. 0.88

  Alignments for each domain:
  == domain 1    score: 135.4 bits;  conditional E-value: 1.4e-43
   PF10149.4  13 ikYknslCsratllvllvvllslilPvlllsalrsyglwskervlyEQPkvkfqyqyllvaetdteed.teslvacSsFssfNqltedtlrisaikvieeDtnlDgktDklsfqlelpdkpt.rllsvqlllffdaelkskcdlsipslvalqkslppaarlasgrislkGdlrlkQsvalkcplpmrgiksk.fnvsveinet..sts.....vdeyklesilaqiekaNvayfelevqeidwtv.......eraaeaplqveleidvlkeailYklslWeklkqfWlqyvsvlliflwvaekvkdflFerqivrs 312
                 ++Y ++ Cs a  + llv+++ l+lP+++  + +  ++w+k+ ++ E P vk++y+++++ e  ++     + + +S+    N + +++lr++  +++e D ++Dgk ++l ++ ++p  +   ++s ++++ff++el+++++ls++++ ++q s+p    la+  +++  dl+ +Q    + pl  +g +s+ +  +   +e+   +      +++ ++ +il++++++N ++++++ + + w+        ++     + + ++i+++ ++i+Y +s+ e l  + ++y+ ++++ +  ++ v  f+F++q+v +
  MMETSP1325-20131115|3778_1   3 RRYYANRCSAAFCFFLLVTTICLVLPFFMAYSASGADFWLKHNTYLEEPTVKYNYKLVMILEGTQSGGsMPQTLFFSTVAPLNSMCQQSLRVPVLRTQEVDGDMDGKAERLEISAQVPVANGeAIYSAKMMVFFEYELREHAKLSMETMGFIQASSP----LAGQSLFVDSDLEWHQ----TWPLTVKGGYSTpYGSEPLLDENgvVPWdggvgAKTVDIPTILKRYRDRNYTTELSTSNVV-WEGmlpaptlTSGDASTFNITATIRYPMQTITYSPSVSEVLFEAGMKYIFMFVVVYLALDLVCAFVFHHQLVDT 310
                 5788899*******************99999999***********************999887776555788999**********************************************999*********************************....9***************....99**99986654387443355541133122222899*****************99998888.97522222214445566***********************************999999*************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1407.86
//
Query:       MMETSP1325-20131115|3779_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0059   14.1   0.0     0.0083   13.5   0.0    1.3  1  PF05478.6 Prominin
  ------ inclusion threshold ------
      0.033   13.1   0.1      0.066   12.2   0.0    1.5  2  PF08612.6 TATA-binding related factor (TRF) of subunit 20 of Mediator complex


Domain annotation for each model (and alignments):
>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   1.2e-06    0.0083     316     393 ..     118     199 ..      74     212 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.2e-06
   PF05478.6 316 lpdvteilenleevveadlskvvqeglstleeipskvkeqtssvvq....evkkaldslgteiksvaeelpkqvkstlsqll 393
                 +p+ ++i   +++v+e+ +sk+ +++  ++ +++ k+ + t++++     +vkk ++ ++++i+++ +++ ++v+++ s ++
  MMETSP1325-20131115|3779_1 118 VPSNKKIQILINKVLETTMSKQQRASKGKFADLQYKMMKDTEGKTRriirDVKKLVEAQNKDIEMMVRKVVTEVENERSGFH 199
                 7889999999***************************999988887666688888999999*******99999999877665 PP

>> PF08612.6  TATA-binding related factor (TRF) of subunit 20 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   9.7e-06     0.066      99     142 ..      63     106 ..      15     108 .. 0.80
   2 ?   -2.3   0.0      0.25   1.7e+03     176     176 ..     161     161 ..     124     199 .. 0.51

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 9.7e-06
   PF08612.6  99 lvmttvsllsadslfqilleklqslWcqrqtvkvegggvYelgd 142
                  +m+++ ++++ds ++ l++  + +W qr  +  e g vY+lg+
  MMETSP1325-20131115|3779_1  63 GMMNILIAIVSDSYDDALSRSSKTYWVQRLDLCAETGLVYKLGN 106
                 5799999***********************************97 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.25
   PF08612.6 176 a 176
                 +
  MMETSP1325-20131115|3779_1 161 K 161
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1003  (0.0733616); expected 273.4 (0.02)
Passed bias filter:                      636  (0.0465184); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.40s 00:00:01.01 Elapsed: 00:00:00.52
# Mc/sec: 1023.06
//
Query:       MMETSP1325-20131115|3782_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-08   33.0  20.7    0.00015   21.1   2.8    4.1  5  PF07699.8  GCC2 and GCC3
  ------ inclusion threshold ------
      0.037   13.6  13.1       0.19   11.3   1.8    3.4  4  PF07562.9  Nine Cysteines Domain of family 3 GPCR
       0.14   12.1   0.2       0.14   12.1   0.1    4.1  3  PF00020.13 TNFR/NGFR cysteine-rich region
       0.22   10.9   0.1       0.22   10.9   0.1    2.8  3  PF06689.8  ClpX C4-type zinc finger


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   1.7     9e-06     0.031       1      40 [.       2      40 ..       2      41 .. 0.83
   2 !   21.1   2.8   4.3e-08   0.00015       1      42 [.      18      60 ..      18      61 .. 0.89
   3 !   11.9   1.4   3.2e-05      0.11       9      30 ..      44      65 ..      39      70 .. 0.89
   4 !    7.2   0.1   0.00095       3.2       1      42 [.      52      99 ..      52     100 .. 0.76
   5 !   14.1   0.5   6.7e-06     0.023       3      45 ..      94     137 ..      90     139 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 9e-06
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskk 40
                Gt++ +++++C+ C  G  ++++g   C +C +gt+ +++
  MMETSP1325-20131115|3782_1  2 GTFSGSSSSECTDCDAGK-SSSAGASGCDSCSAGTFADET 40
                99999999*********9.55666666*****99987766 PP

  == domain 2    score: 21.1 bits;  conditional E-value: 4.3e-08
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqk.kCiaCppgttTskkgs 42
                G+ +++g + C  C+ Gt+ +e+g   +C++C +gt+ +  g+
  MMETSP1325-20131115|3782_1 18 GKSSSAGASGCDSCSAGTFADETGTAgNCKNCTKGTYVDFAGA 60
                788899999*************99999********98777766 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 3.2e-05
   PF07699.8  9 kkCepCprGtYkneegqkkCia 30
                 +C  C +GtY + +g   Ci+
  MMETSP1325-20131115|3782_1 44 GNCKNCTKGTYVDFAGASRCIE 65
                58******************96 PP

  == domain 4    score: 7.2 bits;  conditional E-value: 0.00095
   PF07699.8  1 Gtylk.kgnkkCepCprGtYkneegqkkCiaCppg.....ttTskkgs 42
                Gty + +g ++C++  +G++ +++g    ++C ++      +Ts+kgs
  MMETSP1325-20131115|3782_1 52 GTYVDfAGASRCIEAREGYFCPTVGMLVELKCSSEddygpEYTSGKGS 99
                7888866779***************99555555555557777777776 PP

  == domain 5    score: 14.1 bits;  conditional E-value: 6.7e-06
   PF07699.8   3 ylkkgnkkCepCprGtYk.neegqkkCiaCppgttTskkgskse 45 
                  + kg+ +C +C + +Y+ ++ ++ +C + p g  T+k g + +
  MMETSP1325-20131115|3782_1  94 TSGKGSAICDMCVEKSYWdPNKEKHNCVEKPEGVKTDKAGTTLA 137
                 5678999**********84555555********99999998865 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.4   0.00053       1.8      27      52 ..      11      35 ..      10      37 .. 0.88
   2 ?   11.3   1.8   5.6e-05      0.19      28      52 ..      28      53 ..      27      55 .. 0.91
   3 ?    9.2   0.2   0.00026      0.88      27      52 ..      45      70 ..      44      72 .. 0.91
   4 ?    2.5   0.1     0.031   1.1e+02      28      48 ..     102     123 ..      90     128 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00053
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeq 52
                +C++C++g+ s+  ++  C +C+ ++
  MMETSP1325-20131115|3782_1 11 ECTDCDAGKSSS-AGASGCDSCSAGT 35
                7********999.7899*****9775 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 5.6e-05
   PF07562.9 28 CvpCpegeisnet.dettCkkCpeeq 52
                C +C++g++ +et  + +Ck+C++++
  MMETSP1325-20131115|3782_1 28 CDSCSAGTFADETgTAGNCKNCTKGT 53
                99***********8888*****9985 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.00026
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeq 52
                +C +C++g++++  ++  C ++ e++
  MMETSP1325-20131115|3782_1 45 NCKNCTKGTYVDFAGASRCIEAREGY 70
                6*******************999876 PP

  == domain 4    score: 2.5 bits;  conditional E-value: 0.031
   PF07562.9  28 CvpCpegeisnet.dettCkkC 48 
                 C  C e+++ + + ++ +C++ 
  MMETSP1325-20131115|3782_1 102 CDMCVEKSYWDPNkEKHNCVEK 123
                 8888888888766566677765 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1      0.03     1e+02       5      24 ..       3      18 ..       1      23 [. 0.58
   2 ?   12.1   0.1     4e-05      0.14       1      24 [.      31      52 ..      31      58 .. 0.78
   3 ?    2.2   0.7     0.051   1.8e+02       1       8 [.     105     112 ..      88     123 .. 0.58

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.03
                EEEESSCSEEEEEEE-B-TT CS
  PF00020.13  5 tYtdsknhrqClsCskCepg 24
                t++ s+  ++C   + C+ g
  MMETSP1325-20131115|3782_1  3 TFSGSSS-SEC---TDCDAG 18
                5666444.445...666666 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 4e-05
                C-TTEEEESSCS.EEEEEEE-B-TT CS
  PF00020.13  1 CeegtYtdsknh.rqClsCskCepg 24
                C+ gt+ d++++  +C++C   ++g
  MMETSP1325-20131115|3782_1 31 CSAGTFADETGTaGNCKNC---TKG 52
                9********9997777555...555 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.051
                 C-TTEEEE CS
  PF00020.13   1 CeegtYtd 8  
                 C e++Y+d
  MMETSP1325-20131115|3782_1 105 CVEKSYWD 112
                 55555555 PP

>> PF06689.8  ClpX C4-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.46   1.6e+03      27      31 ..      28      32 ..      20      34 .. 0.73
   2 ?   -2.6   0.1       1.1   3.6e+03      27      32 ..      46      51 ..      45      54 .. 0.78
   3 ?   10.9   0.1   6.4e-05      0.22      19      35 ..      95     110 ..      82     111 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.46
   PF06689.8 27 CdeCv 31
                Cd C 
  MMETSP1325-20131115|3782_1 28 CDSCS 32
                99995 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.1
   PF06689.8 27 CdeCve 32
                C++C +
  MMETSP1325-20131115|3782_1 46 CKNCTK 51
                999965 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 6.4e-05
   PF06689.8  19 aGpngvyICdeCvelcn 35 
                 +G  g  ICd Cve ++
  MMETSP1325-20131115|3782_1  95 SGK-GSAICDMCVEKSY 110
                 577.899*******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.59
# Mc/sec: 576.75
//
Query:       MMETSP1325-20131115|3785_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1272  (0.0930369); expected 273.4 (0.02)
Passed bias filter:                      850  (0.0621709); expected 273.4 (0.02)
Passed Vit filter:                       103  (0.00753365); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 372.77
//
Query:       MMETSP1325-20131115|3786_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.15   11.8  13.5       0.38   10.5   4.0    2.0  2  PF07200.8  Modifier of rudimentary (Mod(r)) protein
       0.43   10.5   5.9       0.82    9.6   1.5    2.0  2  PF08065.7  K167R (NUC007) repeat
       0.56    9.8  10.0       0.12   12.0   2.4    2.6  2  PF02183.13 Homeobox associated leucine zipper
          1    7.8  13.4        2.3    6.6   9.3    1.6  1  PF08317.6  Spc7 kinetochore protein
        1.8    8.3  13.2        2.9    7.7   3.3    2.9  2  PF07989.6  Microtubule associated
        5.9    7.2   8.1         18    5.6   1.8    2.2  2  PF09177.6  Syntaxin 6, N-terminal
        6.5    6.7  15.8          4    7.3   1.2    3.9  3  PF04508.7  Viral A-type inclusion protein repeat
        8.9    5.3  13.6         77    2.2   9.4    2.0  1  PF11802.3  Centromere-associated protein K


Domain annotation for each model (and alignments):
>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.0   0.00022      0.38      38      99 ..      16      77 ..       3      80 .. 0.87
   2 ?    6.4   1.5    0.0041         7      34      64 ..      77     107 ..      71     110 .] 0.85

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00022
                HHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH CS
   PF07200.8 38 ellaqnesLaeenlekepqleelkaqlqdkleelkkleekyeekkqkldelsskyspealke 99
                e ++++e L +e +  +++l+++k +++++ eel  ++  +e+ +q ++   ++++++ +++
  MMETSP1325-20131115|3786_1 16 EEKKEIEHLKKELVLTHTELDMQKVTVKELEEELSVAKRDLEDEQQWKQVAGDNFGLKEALQ 77
                4478999************************************9999999899998876654 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0041
                 --HHHHHHHHHHHHHHH....HHHHHHHHHH CS
   PF07200.8  34 eekeellaqnesLaeenlekepqleelkaql 64 
                 + +++++a+n++L +e le+ +ql ++++ +
  MMETSP1325-20131115|3786_1  77 QRQKAIKADNRKLKQELLELTHQLTAEREAT 107
                 5678999******************999865 PP

>> PF08065.7  K167R (NUC007) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.5   0.00048      0.82      40     110 ..      11      78 ..       8      80 .. 0.85
   2 ?    4.0   0.1     0.027        46      21      52 ..      77     108 ..      75     110 .] 0.84

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00048
   PF08065.7  40 lrkltqtsgetthtpkepvgeekdikafkespkqkLdpaasvtgskRqprtpkekaqaleDLagfqElfqt 110
                 l++ t+ ++e  h +ke v +  +    k ++k+ L   +++ + kR +   +++ q+  D  g++E  q 
  MMETSP1325-20131115|3786_1  11 LGMATEEKKEIEHLKKELVLTHTELDMQKVTVKE-L--EEELSVAKRDLEDEQQWKQVAGDNFGLKEALQR 78 
                 5677888999999999999999997777766664.6..5888999**********************9985 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.027
   PF08065.7  21 krqsktslrKvdvkeElsalrkltqtsgetth 52 
                 +rq  ++  +   k+El++l+ +  + +e+t+
  MMETSP1325-20131115|3786_1  77 QRQKAIKADNRKLKQELLELTHQLTAEREATN 108
                 5777788888899*********9999999986 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.3      0.23   3.9e+02      25      39 ..      18      32 ..      18      38 .. 0.67
   2 ?   12.0   2.4   6.8e-05      0.12      16      41 ..      81     106 ..      74     109 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.23
  PF02183.13 25 qkEkekLraevlsLk 39
                +kE e L++e++   
  MMETSP1325-20131115|3786_1 18 KKEIEHLKKELVLTH 32
                577888888877655 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 6.8e-05
  PF02183.13  16 aLkaendsLqkEkekLraevlsLkek 41 
                 a+ka+n++L++E  +L  ++++ +e 
  MMETSP1325-20131115|3786_1  81 AIKADNRKLKQELLELTHQLTAEREA 106
                 78999*******99999999887776 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   9.3    0.0014       2.3     203     285 ..      13     100 ..       2     110 .] 0.73

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0014
   PF08317.6 203 leecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkse......lleeiaeaekileecrgfsakeisklkekv 285
                 ++  +++e+e+l++eL+ ++ +++ ++  ++eleeel+  k ++e+ ++ k+       l+e ++ ++ i++ +r+ + +e+ +l++++
  MMETSP1325-20131115|3786_1  13 MATEEKKEIEHLKKELVLTHTELDMQKVTVKELEEELSVAKRDLEDEQQWKQVagdnfgLKEALQRQKAIKADNRKLK-QELLELTHQL 100
                 6677899**************************************999888752222225666666666666666654.4555555554 PP

>> PF07989.6  Microtubule associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.3    0.0017       2.9      32      74 ..      15      57 ..       7      58 .. 0.89
   2 ?    3.8   1.1     0.027        46      42      59 ..      76      93 ..      57     109 .. 0.45

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0017
   PF07989.6 32 kraeesveellkenielkvevetlkrelkekkklLkkaekale 74
                 + ++++e+l ke++ +++e+   k ++ke++++L+ a+++le
  MMETSP1325-20131115|3786_1 15 TEEKKEIEHLKKELVLTHTELDMQKVTVKELEEELSVAKRDLE 57
                56778999*************99999**************998 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.027
   PF07989.6 42 lkenielkvevetlkrel 59
                l++   +k++  +lk+el
  MMETSP1325-20131115|3786_1 76 LQRQKAIKADNRKLKQEL 93
                222223333333333333 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   1.8     0.011        18      33      68 ..      17      55 ..       3      63 .. 0.63
   2 ?    4.8   0.4      0.02        34      22      63 ..      60     101 ..      59     108 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.011
   PF09177.6 33 sskelkeltkeL...enalesiewdledLeeavsvvekn 68
                ++ke+++l+keL   +++l+  + ++++Lee+ sv++++
  MMETSP1325-20131115|3786_1 17 EKKEIEHLKKELvltHTELDMQKVTVKELEEELSVAKRD 55
                456777777777555566666667777777777777665 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.02
   PF09177.6  22 rsweelrsdstsskelkeltkeLenalesiewdledLeeavs 63 
                 ++w++   d+   ke+ + +k +++  ++++++l +L    +
  MMETSP1325-20131115|3786_1  60 QQWKQVAGDNFGLKEALQRQKAIKADNRKLKQELLELTHQLT 101
                 578888888878899999999999999999999999987665 PP

>> PF04508.7  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.7     0.013        22       5      17 ..      16      28 ..      15      28 .. 0.92
   2 ?    7.3   1.2    0.0023         4       1      19 [.      33      51 ..      33      60 .. 0.88
   3 ?    2.2   0.3      0.11   1.8e+02       5      22 ..      88     105 ..      87     106 .. 0.90

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.013
   PF04508.7  5 rlRrkIsdLekqL 17
                +++++I+ L+k+L
  MMETSP1325-20131115|3786_1 16 EEKKEIEHLKKEL 28
                78*********99 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0023
   PF04508.7  1 rEldrlRrkIsdLekqLsd 19
                +Eld ++ ++++Le++Ls 
  MMETSP1325-20131115|3786_1 33 TELDMQKVTVKELEEELSV 51
                69999************95 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.11
   PF04508.7   5 rlRrkIsdLekqLsdcrr 22 
                 +l++++ +L  qL  +r+
  MMETSP1325-20131115|3786_1  88 KLKQELLELTHQLTAERE 105
                 7999*********99986 PP

>> PF11802.3  Centromere-associated protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   9.4     0.045        77      82     153 ..      25      92 ..       3     109 .. 0.54

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.045
   PF11802.3  82 kkdvllilGkeeldklksdLemvLssvkkknekL...kedLereqkfld...eqqqildslkelqkelknkvrtlses 153
                 kk         el   +++L+m   +vk+++e L   k+dLe eq++++   +   ++++l+ +qk +k+  r+l+++
  MMETSP1325-20131115|3786_1  25 KK---------ELVLTHTELDMQKVTVKELEEELsvaKRDLEDEQQWKQvagDNFGLKEALQ-RQKAIKADNRKLKQE 92 
                 33.........344444555555555555555444446777777777643225555666664.455555555554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1291  (0.0944266); expected 273.4 (0.02)
Passed bias filter:                      588  (0.0430076); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.43s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 497.36
//
Query:       MMETSP1325-20131115|3789_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        89  (0.00650965); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|3780_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.008   16.1   0.1      0.011   15.7   0.1    1.2  1  PF10801.3 Protein of unknown function (DUF2537)
  ------ inclusion threshold ------
       0.32   10.7   4.0       0.42   10.4   2.8    1.2  1  PF13670.1 Peptidase propeptide and YPEB domain


Domain annotation for each model (and alignments):
>> PF10801.3  Protein of unknown function (DUF2537)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.6e-06     0.011      28      70 ..      15      53 ..       4      62 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.6e-06
   PF10801.3 28 lirvhpllavglnlvavgGlaPtvWgwrrtPvlrWlvlGaavG 70
                 +rv  lla++l lv ++ +aP++     +P  rW +  + +G
  MMETSP1325-20131115|3780_1 15 KMRVATLLALALSLVSASAFAPSMA----RPASRWALKSSVAG 53
                589********************85....58888887766666 PP

>> PF13670.1  Peptidase propeptide and YPEB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.8   6.1e-05      0.42       2      52 ..      20      70 ..      19      83 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 6.1e-05
   PF13670.1  2 aalalaaallaaaAlAkddtdapkadwlsreavqakleaqGy.kvkkievdd 52
                ++lala+ l++a+A+A ++   p + w+  + v   + a+   + kk e + 
  MMETSP1325-20131115|3780_1 20 TLLALALSLVSASAFA-PSMARPASRWALKSSVAGDIDAEAAaELKKLEKEA 70
                78999999********.9999*******999999999998888999998854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       794  (0.0580749); expected 273.4 (0.02)
Passed bias filter:                      556  (0.0406671); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 385.13
//
Query:       MMETSP1325-20131115|3793_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|3790_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   13.8   0.1      0.052   12.9   0.0    1.4  1  PF04190.8 Protein of unknown function (DUF410)
       0.17   11.5   2.4        1.8    8.2   0.0    2.7  3  PF05524.8 PEP-utilising enzyme, N-terminal


Domain annotation for each model (and alignments):
>> PF04190.8  Protein of unknown function (DUF410)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   7.6e-06     0.052      22      81 ..      87     146 ..      83     154 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 7.6e-06
                 HTT------HHHHHHHHHHHH..TT---SHHHHHHHHHHHHHS-TT-TTHHHHH---HHHHH CS
   PF04190.8  22 kekQegsaaDlallllevlek..aevadsvekvarlaeliaeldpseperkklvkraikWst 81 
                 ++ Q  +a D   +++ +++k  ++ +d++e  ++++++i+++ pse e+ k  k + +W t
  MMETSP1325-20131115|3790_1  87 EKLQDRAAYDFK-YMAKSFSKylNICKDKDER-ENFVKMINGARPSEAEQAKSKKELGEWFT 146
                 667888899975.99*******9********9.****************9999999988865 PP

>> PF05524.8  PEP-utilising enzyme, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00026       1.8      26      79 ..      17      69 ..      10      74 .. 0.79
   2 ?    1.9   0.0     0.023   1.6e+02      49      99 ..      84     135 ..      78     139 .. 0.83
   3 ?   -0.8   0.2      0.16   1.1e+03      32      42 ..     202     212 ..     179     233 .] 0.45

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00026
   PF05524.8 26 pereasdveaEierleaAlekareeleelaeqlseelgaeeaaileahlllleD 79
                p+++ +d+e+  + l++A +k++eel +lae+  + + ae+ + ++ +++++  
  MMETSP1325-20131115|3790_1 17 PPKQKQDPESHHHLLDDAEAKSNEELTKLAEN-GKWIPAEKLDEINFQRAMAGQ 69
                566678*************************9.555555555666777777665 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.023
   PF05524.8  49 eeleelaeqlseelgaeeaaileahlllleDpelleeveerIregl..sAeaA 99 
                 +ele+l+++++ ++ +  a+ ++ +l +++D++ +e+  ++I+  +   Ae+A
  MMETSP1325-20131115|3790_1  84 DELEKLQDRAAYDF-KYMAKSFSKYLNICKDKDERENFVKMINGARpsEAEQA 135
                 78999999999999.888888***********999999999998876556666 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.16
   PF05524.8  32 dveaEierlea 42 
                  +++E e+ ++
  MMETSP1325-20131115|3790_1 202 AADKEAEHHKS 212
                 22222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       733  (0.0536132); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 997.06
//
Query:       MMETSP1325-20131115|3794_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   12.1   1.4       0.19   11.8   1.0    1.1  1  PF09806.4 Cyclin-dependent kinase 2-associated protein
        4.8    5.1  11.2        5.1    5.0   7.7    1.0  1  PF09770.4 Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PF09806.4  Cyclin-dependent kinase 2-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.0   2.7e-05      0.19      20      88 ..      26      91 ..      12     100 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.7e-05
   PF09806.4 20 aiPrsqkknesqkqreerekqaqvesnhrgrssvsgsagssssnssalrarsskqssaaaaaaaekava 88
                ++P+sq++ e+q+qr+++++q +v+s + +  s +   g    ++ a + ++ + s  aa   +e+ava
  MMETSP1325-20131115|3794_1 26 QLPPSQQQYEYQQQRRRQQQQGRVPSSNVAYQSPG---GMGPPPAPAASGSQGRYSVRAAGDXTEQAVA 91
                689*****9***************97655544443...3333333333333333333344444444444 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   7.7   0.00074       5.1     220     294 ..      10      72 ..       3     108 .. 0.45

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.00074
   PF09770.4 220 lqqapsqapaqaplpaqlpqqlqnlqqqqlpqlsqqmppqpvqppqqqqqqvlklpqaqppplqqlsaspqlaqq 294
                 +q++ sqap              ++ q+qlp+ +qq   q+++  qqqq +v   ++a+++p ++ +++   a +
  MMETSP1325-20131115|3794_1  10 AQPHLSQAPRV------------PHVQPQLPPSQQQYEYQQQRRRQQQQGRVPSSNVAYQSPGGMGPPPAPAASG 72 
                 22222222222............2223333333333333333333333333333334444444433333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       472  (0.0345231); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 528.09
//
Query:       MMETSP1325-20131115|3792_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-28   99.8   1.7    5.5e-28   97.9   1.2    1.8  1  PF01915.17 Glycosyl hydrolase family 3 C-terminal domain
    1.6e-21   75.8   0.2      3e-21   74.9   0.1    1.5  1  PF14310.1  Fibronectin type III-like domain
  ------ inclusion threshold ------
      0.013   14.9   0.1      0.059   12.9   0.0    2.2  3  PF13464.1  Domain of unknown function (DUF4115)


Domain annotation for each model (and alignments):
>> PF01915.17  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   1.2   1.2e-31   5.5e-28      32     226 ..      13     199 ..       3     200 .. 0.83

  Alignments for each domain:
  == domain 1    score: 97.9 bits;  conditional E-value: 1.2e-31
                 .............HHHHHHHHHHHHHHTTSS---EEEEEET----HHHHHHHHH-SEEEE---......-S--B---B-SS--SGGGHHHHHHHHH.HHHHT--EEEEE-SSGGGGGGGT.T-SEEEE------STTT---TTT----------SS-EE-SS..............................----EEE-------S- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01915.17  32 ksgggsgavnpsylvtplegirarlskakvvveekgseveddeeiaeavaaakkaDvavvvvgewegegekeeeseegdrtdlalpenqdeLieav.aaankpvvvvlhsggpvdmepwaekvkAilaawypGqegGnAiadvLfGdvnPsGkLPvtfpksledlpayynek............ekkrtyrydsedplypfgeGlsvg 226
                 +  ggsg+v p +++t++eg++ar+++   +v ++      +++ ++a +aa+ aD+a ++ g + +e +        dr +l+l   q+ + ++  +a+ +p+v v  s g v m p+ ++v A+l++++ G ++G+A+a v fGd+nP+ k Pvtfpks++d+ a   +             +       +  +  +pfg+Gls++
  MMETSP1325-20131115|3792_1  13 YVVGGSGRVIPESVTTVVEGLKARAQAVGAKVVASL-----TDDVDAALSAAEGADIAFMCGGGKTTEST--------DRDSLSLE--QESFMTSFaKATSTPTVAVALSPGTVLM-PFVDDVEAVLNVFLAGASTGDALAAVAFGDHNPAAKSPVTFPKSEDDVVAPCPDTaceyseglfvgyR-----AMEDMEVNFPFGHGLSYT 199
                 66799**********************999776655.....899*******************5555555........99999996..4555555515666***************.*********************************************99988865556777765433221.....234447888888888887 PP

>> PF14310.1  Fibronectin type III-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.1   6.7e-25     3e-21       1      71 []     233     302 ..     233     302 .. 0.99

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 6.7e-25
   PF14310.1   1 evvQlYvsdpegsverpvkqLkgFekveLapGesetvtitldrkdlsvwdeeaqnwvveaGeytvlvgdss 71 
                 evvQlYv +p++ +++p+k Lkg+ekv+L++G+ e+v++tld  +l+vwd  a +w + aG+++v+vg+ss
  MMETSP1325-20131115|3792_1 233 EVVQLYVGFPAA-AGEPPKVLKGYEKVTLEKGAAEQVSFTLDGNALKVWDNVAWDWAAVAGSFDVMVGSSS 302
                 8**********9.9*******************************************************98 PP

>> PF13464.1  Domain of unknown function (DUF4115)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.64   2.9e+03      15      30 ..     212     228 ..     211     245 .. 0.60
   2 ?   12.9   0.0   1.3e-05     0.059      27      61 ..     244     279 ..     225     285 .. 0.83
   3 ?   -2.3   0.0      0.69   3.1e+03      32      48 ..     285     302 ..     282     307 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.64
   PF13464.1  15 dadGkvlfegvl.kaGe 30 
                 d+dG+v ++ +  + G+
  MMETSP1325-20131115|3792_1 212 DKDGAVTLSATIeNTGD 228
                 67887777776634444 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 1.3e-05
   PF13464.1  27 kaGesfev.egeepfklrlGnagavylsvnGeavdl 61 
                  aGe   v +g e+++l  G+a++v+++++G+a+++
  MMETSP1325-20131115|3792_1 244 AAGEPPKVlKGYEKVTLEKGAAEQVSFTLDGNALKV 279
                 789998899***********************9987 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 0.69
   PF13464.1  32 fev.egeepfklrlGnag 48 
                 +++ +++++f++++G ++
  MMETSP1325-20131115|3792_1 285 WDWaAVAGSFDVMVGSSS 302
                 677788899999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.39s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 1470.71
//
Query:       MMETSP1325-20131115|3791_1  [L=301]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-25   88.0   0.5      5e-25   86.9   0.1    1.8  2  PF08069.7  Ribosomal S13/S15 N-terminal domain
    3.1e-22   78.0   0.5    4.7e-22   77.4   0.3    1.3  1  PF00312.17 Ribosomal protein S15
     0.0077   15.6   0.2       0.01   15.2   0.2    1.2  1  PF00141.18 Peroxidase
  ------ inclusion threshold ------
       0.07   12.7   7.3       0.12   12.0   5.1    1.4  1  PF10099.4  Anti-sigma-K factor rskA


Domain annotation for each model (and alignments):
>> PF08069.7  Ribosomal S13/S15 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.9   0.1   1.5e-28     5e-25       1      60 []     151     210 ..     151     210 .. 0.99
   2 ?   -3.7   0.0       2.9     1e+04      16      26 ..     280     290 ..     275     294 .. 0.71

  Alignments for each domain:
  == domain 1    score: 86.9 bits;  conditional E-value: 1.5e-28
   PF08069.7   1 MarmhsrgkGkSgstrpyrrtaPeWlklspeeveelivklakkGltpSqIGviLRDqyGi 60 
                 M+r+hs+gkG ++s++py+r++P+Wlk ++ evee+++ lakkGl+pS IGviLRD  Gi
  MMETSP1325-20131115|3791_1 151 MGRLHSKGKGVARSALPYKRSPPQWLKSTSTEVEEHVCRLAKKGLRPSAIGVILRDANGI 210
                 **********************************************************98 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 2.9
   PF08069.7  16 rpyrrtaPeWl 26 
                 r  r+ aP+W 
  MMETSP1325-20131115|3791_1 280 RTSRKLAPNWK 290
                 45577789995 PP

>> PF00312.17  Ribosomal protein S15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   0.3   1.4e-25   4.7e-22       2      80 ..     216     298 ..     215     301 .] 0.96

  Alignments for each domain:
  == domain 1    score: 77.4 bits;  conditional E-value: 1.4e-25
  PF00312.17   2 akekkiseilkeekdtgsvevqvalLterivrLrkHleehkkDysskrgLiklvskrkrLlaYlkkkn....takYeeliekl 80 
                 ++++ki + lk+++ +++++++++ L++++v +rkHle+++kD++sk +Li ++s+++rL++Y+++ +     +kYe+++++ 
  MMETSP1325-20131115|3791_1 216 VTGQKILRLLKKNGLAPEIPEDLYFLIKKAVSVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTSRklapNWKYESATAST 298
                 6899****************************************************************99999*****99875 PP

>> PF00141.18  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.2     3e-06      0.01      71     136 ..      99     196 ..      48     204 .. 0.76

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 3e-06
                 ...S-HHHHHHHHHHHHHHH----..-.--EE----------.....-..........................-...........HHHHHHHHH---- CS
  PF00141.18  71 pgtvScADlialaardavelaggp..lvpvslGRrDatessasevsnl..........................P.....dpkasadelrdkfarkglt 136
                    v +AD  alaardav  +      + + +GR  +  ssas +  +                          P     +++++++e + + a+kgl 
  MMETSP1325-20131115|3791_1  99 AVAVXYADAAALAARDAVRVTDKTcrEMSIHTGRHHSPASSASAA-RPvaatxmgrlhskgkgvarsalpykrsPpqwlkSTSTEVEEHVCRLAKKGLR 196
                 34699***************95554466999****9999999877.33356666666666666666666555552566666677777777777777775 PP

>> PF10099.4  Anti-sigma-K factor rskA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   5.1   3.4e-05      0.12      12      69 ..      62     115 ..      53     163 .. 0.56

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.4e-05
   PF10099.4  12 rlfaepaaaaaarsarlwr.rlrrWrglalaaaAaaavlalalllv..qataaaaqpaaap 69 
                 +l+a++   a ++++r+   r +r  +la+aaaAaa+++a+a+ ++        a +a ++
  MMETSP1325-20131115|3791_1  62 QLNAKDX--AVQTQTRPSPtRSARLPPLAVAAAAAAVAVAVAVXYAdaA-----ALAARDA 115
                 3333333..2333333333456666777767777777777777666441.....2222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       542  (0.0396431); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1311.46
//
Query:       MMETSP1325-20131115|3797_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.8   0.1     0.0061   16.7   0.0    1.8  2  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.1   4.6e-05      0.62     130     145 ..     122     137 ..      12     138 .. 0.82
   2 !   16.7   0.0   4.4e-07    0.0061      16      56 ..      99     154 ..      86     185 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 4.6e-05
                 ------STTT----TT CS
  PF00504.16 130 kaelklkEiknGRlAM 145
                 + +++ +Ei nGR+AM
  MMETSP1325-20131115|3797_1 122 LGFTRPAEISNGRAAM 137
                 4456667777777777 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 4.4e-07
                 XXXXX.---.............-TTTTT--------TTT--------------..- CS
  PF00504.16  16 Dplglskdp.............tlkrlreaEliHGRvAMlavlGalvpelltk..l 56 
                 D + lsk+               l + r aE+ +GR AM  ++  +++el+t+  +
  MMETSP1325-20131115|3797_1  99 DLAALSKEWkrarilreieeskLLGFTRPAEISNGRAAMFFIVVGIITELFTGesV 154
                 5556654435556666666666788899*************999999999987332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       582  (0.0425688); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 940.11
//
Query:       MMETSP1325-20131115|3796_1  [L=873]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
          0 1169.3   1.0          0 1169.1   0.7    1.0  1  PF03971.9  Monomeric isocitrate dehydrogenase
    5.2e-09   34.6   0.1    0.00063   18.7   0.0    2.9  2  PF00036.27 EF hand
    7.5e-08   31.5   0.2    0.00076   19.0   0.0    3.0  2  PF13405.1  EF-hand domain
    1.3e-07   31.4   0.8    3.6e-07   30.0   0.6    1.7  1  PF13499.1  EF-hand domain pair
    2.5e-05   23.2   0.1       0.32   10.3   0.0    2.9  2  PF13202.1  EF hand
    0.00013   21.3   0.3    0.00041   19.8   0.0    2.0  2  PF13833.1  EF-hand domain pair
     0.0025   17.7   0.5     0.0079   16.1   0.1    2.1  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF03971.9  Monomeric isocitrate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1169.1   0.7         0         0       1     734 [.     127     861 ..     127     862 .. 0.99

  Alignments for each domain:
  == domain 1    score: 1169.1 bits;  conditional E-value: 0
   PF03971.9   1 kiiytltdeapalatysllpivkafaksagidvetsdislagrilaefpdvlteeqrvsddlaelgelakspdaniiklpnisasvpqlkaaikelqdkGyavpdypedpktdeekavkerydrikGsavnpvlreGnsdrrapkavknyarknphsmGawskaskshvasmregdffaseksvvlakatkvkielvakdGkvkvlkekvalkdgeiidaavlskkallafleeqlkdakekgvlfslhlkatmmkvsdpiifGhavkvfykdvfdkygdlldelGvdvnnGlgdlyakieslpaeqreeieadiqavyakrpelamvdsdkGitnlhvpsdvivdasmpamirasGkmwgkdGklkdtkavipdstyagvyqevidfckehGafdpttmGsvpnvGlmaqkaeeyGshdktfeleadGvvrvv.daaGevlleesveaGdiwrmcqvkdapikdwvklavtrarlsnvpavfwldearahdkelikkveaylkdhdteGldikilspveaikfslerlkkGkdtisvtGnvlrdyltdlfpilelGtsakmlsivplmaGGGlfetGaGGsapkhvqqlveenylrwdslGeflalaasleelgiktgnakakvlakaldaatgklldndkspsrkvGeldnrGshfylalywaqalaaqdedaelkakfaslakaltekeakivaelnavqGkpadiGGyyapdlekvaavmrpsktfnaale 734
                 kiiyt+tdeapalatys+lpi++af +s+++ ve +dis+agri+a+fpd+l+++q  +d+la+lgelak+p+aniiklpn+sas+pql  ai+elq kGy+vp+yp +p tdee ++++ry  ++GsavnpvlreGnsdrr  + vk++a knp+++Gaws +s shv++m ++dffa+e+s +++++++v+ie v+ dG+++vlk k +l +ge+ida+ +    l++f+ eq++dakekg+lfslhlkatmmkvsdpi+fGh v+vf++dvf+k++ ++delGv++ nG+ d+++ki +lp+++r+++eadi+a++a+ p++amvds +Gitnlhvp dvi+dasmp +ir sG mw+kd  l+d k vipd++ya +y+e++++c+e+Gaf  +tmG v nvGlmaqkaeeyGshdktfe  ++G++rvv  ++ + ++ +sv +Gdiwrm q+kd+pi+dwvklav+ra+++  pa+fwl+e+rahd+++i+kv++yl+d dt+Gldi+i +p++a+k +l+r+  G+dtisvtGnvlrdyltdlfpilelGtsakmlsivpl+aGGGlfetGaGGsapkhvqq+ +e +lrwdslGeflala+s+e+lg+ktgn+kakvla+al++a+g ll+++ksp rkvG+ldnrGshfy+a +wa++laaq+ d +l+a+fa++a+ l+++e++i+ el+a+ G p+d+GG++ pd +k+ ++mrps t+n +++
  MMETSP1325-20131115|3796_1 127   861
                 79************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************54667789*************************************************************************************************************************************************************************************************************************************************************************************************9986 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   3.2e-07   0.00063       2      28 ..      24      50 ..      23      51 .. 0.92
   2 !   13.0   0.0   2.2e-05     0.043       1      24 [.      59      82 ..      59      86 .. 0.92

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 3.2e-07
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                l eaF+ +D D++G+++ eE+ +al++
  MMETSP1325-20131115|3796_1 24 LAEAFNRYDGDRNGTMDREEMAAALAD 50
                679********************9986 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 2.2e-05
                HHHHHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfke 24
                e++++F+++D + dG++ + E+++
  MMETSP1325-20131115|3796_1 59 EVDRLFQHLDENMDGTVQLTEWLD 82
                799******************986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   3.9e-07   0.00076       3      27 ..      25      49 ..      23      53 .. 0.91
   2 !    9.1   0.0   0.00061       1.2       2      23 ..      60      81 ..      59      86 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 3.9e-07
                H---GCC-------B---HHHHHHH CS
   PF13405.1  3 reaFklfDkdgdGkidaeELrdaLr 27
                 eaF+ +D d++G+ d+eE+ +aL 
  MMETSP1325-20131115|3796_1 25 AEAFNRYDGDRNGTMDREEMAAALA 49
                58********************996 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00061
                HH---GCC-------B---HHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELr 23
                + ++F+++D + dG++ + E +
  MMETSP1325-20131115|3796_1 60 VDRLFQHLDENMDGTVQLTEWL 81
                6799************999976 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.6   1.9e-10   3.6e-07       2      63 ..      24      81 ..      19      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 1.9e-10
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63
                l eaF+++D d++g+ d+ee+ ++l  l  + s+ ev+++    f+ lD+n dG+++++E l
  MMETSP1325-20131115|3796_1 24 LAEAFNRYDGDRNGTMDREEMAAALADLELPDSEFEVDRL----FQHLDENMDGTVQLTEWL 81
                6789************************977666666666....***************976 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00023      0.44       3      23 ..      26      46 ..      24      49 .. 0.86
   2 !   10.3   0.0   0.00016      0.32       3      21 ..      62      80 ..      60      84 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00023
                HHHHHH--S----B-HHHHHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreELkr 23
                ++F+++D ++ G+ +reE+ +
  MMETSP1325-20131115|3796_1 26 EAFNRYDGDRNGTMDREEMAA 46
                56****************976 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00016
                HHHHHH--S----B-HHHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreEL 21
                 +F+ +D N DG++   E+
  MMETSP1325-20131115|3796_1 62 RLFQHLDENMDGTVQLTEW 80
                48************99998 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   2.1e-07   0.00041       2      51 ..      36      84 ..      35      86 .. 0.89
   2 ?   -3.5   0.0       3.8   7.3e+03      21      35 ..     369     385 ..     361     385 .. 0.72

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 2.1e-07
   PF13833.1  2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvll 51
                +G ++ree+  ala l l+  se evd lf ++D + dG + + E++++l
  MMETSP1325-20131115|3796_1 36 NGTMDREEMAAALADLELP-DSEFEVDRLFQHLDENMDGTVQLTEWLDRL 84
                799**********988666.67777********************99865 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 3.8
   PF13833.1  21 g..lseeevdilfrefD 35 
                 g  +s +   +++++ D
  MMETSP1325-20131115|3796_1 369 GilFSLHLKATMMKVSD 385
                 34488888889999887 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   4.1e-06    0.0079      56     111 ..      24      81 ..       2      82 .. 0.80
   2 ?   -3.2   0.0       3.8   7.4e+03      84      99 ..     387     400 ..     378     411 .. 0.66

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 4.1e-06
   PF10591.4  56 veWkFnqlDtnkdkvlsksElaplrapl..vklehCikeffksCDadkdkkisleEWc 111
                 +   Fn+ D+++++ ++++E+a+  a+l     e  ++++f++ D + d++++l EW 
  MMETSP1325-20131115|3796_1  24 LAEAFNRYDGDRNGTMDREEMAAALADLelPDSEFEVDRLFQHLDENMDGTVQLTEWL 81 
                 4557****************9988887754678999*********************7 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 3.8
   PF10591.4  84 vklehCikeffksCDa 99 
                 + + hC++ ff   D+
  MMETSP1325-20131115|3796_1 387 IMFGHCVEVFFA--DV 400
                 56789***9996..44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (873 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.27u 0.37s 00:00:01.64 Elapsed: 00:00:00.86
# Mc/sec: 2432.58
//
Query:       MMETSP1325-20131115|3798_1  [L=265]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-07   28.3   1.5    2.8e-06   26.1   0.2    2.6  2  PF00036.27 EF hand
    3.2e-06   26.5   0.7      8e-06   25.2   0.1    1.9  2  PF13833.1  EF-hand domain pair
      8e-06   25.8   0.2    1.7e-05   24.7   0.1    1.6  1  PF13499.1  EF-hand domain pair
    0.00011   21.7   4.9     0.0012   18.4   0.4    2.8  3  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.014   14.5   3.0      0.016   14.3   0.9    2.0  2  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.16   4.3e+02       3      29 .]      85     111 ..      83     111 .. 0.74
   2 !   26.1   0.2     1e-09   2.8e-06       1      26 [.     123     148 ..     118     151 .. 0.91

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.16
                 HHHHHHHCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfkealkkl 29 
                 +++F+ f  D  G Is  +f++ l+kl
  MMETSP1325-20131115|3798_1  85 DQIFAFFKSDAGGDISPLDFQDGLAKL 111
                 566666666777899999999999875 PP

  == domain 2    score: 26.1 bits;  conditional E-value: 1e-09
                 HHHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkeal 26 
                 el e+F+e+D+Dgd +I+ +Efk+ +
  MMETSP1325-20131115|3798_1 123 ELGEIFQELDTDGDQTIDIQEFKNHC 148
                 6889******************9865 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.7   4.7e+03      18      32 ..      78      92 ..      72      92 .. 0.69
   2 !   25.2   0.1   2.9e-09     8e-06       2      48 ..      96     145 ..      95     146 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.7
   PF13833.1 18 glkglseeevdilfr 32
                + +g++ +++ + f+
  MMETSP1325-20131115|3798_1 78 KESGMTVDQIFAFFK 92
                445599999988886 PP

  == domain 2    score: 25.2 bits;  conditional E-value: 2.9e-09
   PF13833.1   2 kGlItreeLkralallglkg......lseeevdilfrefDtdgdGkisfeEFc 48 
                 +G I++ ++++ la+l   g      ++eee+ ++f e+Dtdgd  i+  EF+
  MMETSP1325-20131115|3798_1  96 GGDISPLDFQDGLAKL---GpaitktITEEELGEIFQELDTDGDQTIDIQEFK 145
                 799********88777...3456888*************************97 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.1   6.3e-09   1.7e-05       4      64 ..      86     146 ..      77     148 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 6.3e-09
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64 
                 ++F  + +d  g +++ +++  l +lg  ++   ++e+l +if+elD++gd +++ +Ef +
  MMETSP1325-20131115|3798_1  86 QIFAFFKSDAGGDISPLDFQDGLAKLGPAITKTITEEELGEIFQELDTDGDQTIDIQEFKN 146
                 56777777888999999*********9999999999999999****************975 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.014        39       3      30 ..      85     111 ..      83     112 .. 0.87
   2 ?    1.0   0.0      0.17   4.6e+02      16      26 ..     118     128 ..     116     129 .. 0.84
   3 !   18.4   0.4   4.2e-07    0.0012       2      25 ..     124     147 ..     123     150 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.014
                 H---GCC-------B---HHHHHHH.H- CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLrksl 30 
                  ++F  f  d  G i+  +++d L  +l
  MMETSP1325-20131115|3798_1  85 DQIFAFFKSDAGGDISPLDFQDGLA-KL 111
                 578999999*************998.55 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.17
                 -B---HHHHHH CS
   PF13405.1  16 kidaeELrdaL 26 
                 +i+ eEL+ ++
  MMETSP1325-20131115|3798_1 118 TITEEELGEIF 128
                 8******9987 PP

  == domain 3    score: 18.4 bits;  conditional E-value: 4.2e-07
                 HH---GCC-------B---HHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrda 25 
                 l e+F+ +D+dgd +id++E++++
  MMETSP1325-20131115|3798_1 124 LGEIFQELDTDGDQTIDIQEFKNH 147
                 6699*****************975 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       0.6   1.6e+03      15      23 ..     118     126 ..     118     128 .. 0.81
   2 ?   14.3   0.9     6e-06     0.016       3      22 ..     126     145 ..     124     148 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.6
                 -B-HHHHHH CS
   PF13202.1  15 kIsreELkr 23 
                 +I+ eEL +
  MMETSP1325-20131115|3798_1 118 TITEEELGE 126
                 699***975 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 6e-06
                 HHHHHH--S----B-HHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELk 22 
                 ++F+++D++gD +I+++E+k
  MMETSP1325-20131115|3798_1 126 EIFQELDTDGDQTIDIQEFK 145
                 57*****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       663  (0.0484933); expected 273.4 (0.02)
Passed bias filter:                      505  (0.0369368); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.44s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1270.07
//
Query:       MMETSP1325-20131115|3799_1  [L=275]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.3e-36  122.9   0.3    1.1e-35  122.5   0.2    1.0  1  PF10032.4 Phosphate transport (Pho88)


Domain annotation for each model (and alignments):
>> PF10032.4  Phosphate transport (Pho88)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.5   0.2   7.7e-40   1.1e-35       1     178 [.      16     186 ..      16     200 .. 0.88

  Alignments for each domain:
  == domain 1    score: 122.5 bits;  conditional E-value: 7.7e-40
   PF10032.4   1 mspqvsnlvislvllqvskridfedPevllyirilyvlsqvilllvylylrvkikkknDlttlkyvepasplsseeeeklekttvkeYDlkelrkllksilmgvammgfmhlymkytnPLllQsisplksllesnlvkihllgkpaegdLkRPfkeasglfeaaeaaaaevktdkkai 178
                 m+p   ++++++ l++  k + ++   +   +ri+++++ +  ++v++y++++ +k  +   + ++e++  + + ee   +++t++eYD +++ + +ks l+g+++++ +h +++ + PLl Qsi+ + +ll+ nl+kih+l++ a g+L+RPfk+  + f+a+ +  +  + dkk  
  MMETSP1325-20131115|3799_1  16 MNP---KMFVVPALMMGVKYLKLDLNLYKTELRIAFAMAVLFKYAVIYYVYLTSQKAAEAGPVTVKEKK--MDGTEE--EKTMTTREYDAQQIMTNFKSGLFGLCITCGIHYKWGNASPLLFQSIMLPMGLLDDNLFKIHILQNAAVGKLARPFKAPESPFAALAEDKKALTDDKKDN 186
                 888...9**************************************************************..777655..6799***********************************************************************986655555555444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.41s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 1372.91
//
Query:       MMETSP1325-20131115|3802_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 396.49
//
Query:       MMETSP1325-20131115|3803_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.45s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 332.83
//
Query:       MMETSP1325-20131115|3804_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-06   25.7   0.1      0.021   13.0   0.0    2.0  2  PF00171.17 Aldehyde dehydrogenase family
  ------ inclusion threshold ------
       0.13   12.2   0.3       0.28   11.1   0.2    1.7  1  PF12445.3  Flagellin protein


Domain annotation for each model (and alignments):
>> PF00171.17  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   1.1e-05     0.075     193     300 ..       5     108 ..       1     130 [. 0.83
   2 !   13.0   0.0   3.1e-06     0.021     377     437 ..     140     199 ..     135     228 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.1e-05
                 -HHHH-TTCC-TT-SEEEE--------HHHHHHHTTT-EEEEE----EEEEE-TTS-HHHHHHHHHHHHHTT----TTSEEEEEEEGGGHHHHHHHHHHHHHT----- CS
  PF00171.17 193 gsevgealvehpdvdkvsftGstevgrkiakaaaknlkkvtlElGGkspliVledaDldkaveaivkgaflnaGQvCiatsrllVhesiydefveklveaakklkvGd 300
                  +ev e l  ++ +d v   G+    +++ ++      +v+    G  +l++ ++aD  ka++ +v + +++    C at+ +l+he +++   e ++ a+++ +v  
  MMETSP1325-20131115|3804_1   5 RNEVTELLRLDSLIDLVIPRGGKGLVHHVRQNTR---IPVLSHADGICHLFIDAEADGAKAISIAVDSKTDYP-AACNATETVLLHEATVNTCAETVLRALRQANVTL 108
                 6677888888888899999999999999999877...999999*************************99987.79**************999999999988877654 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 3.1e-06
                 EEEESSHHHHHHHHHSSSB---EEEE-SBHHHHHHHHHHS----EEESS-TT--TTTS-B- CS
  PF00171.17 377 vikfkdeeeaielaNdteyGLaaavftedleraervaerleaGnvwiNdsstgdaealpfg 437
                 v  + d++ ai+   +   + + +++te+ ++ae++ +r++a  v +N s t  a+++ fg
  MMETSP1325-20131115|3804_1 140 VEVVPDIDAAIAHIHEHGSAHTESIVTENPDTAEYFQQRVDAACVFHNAS-TRFADGFRFG 199
                 5567799999***************************************9.5555554665 PP

>> PF12445.3  Flagellin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   4.2e-05      0.28       5      71 ..      55     123 ..      51     178 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.2e-05
   PF12445.3   5 aasaaakaatittdsgttyklagatagtvdvtgatvs..adallsavksaaftattgtitynvgvlsgk 71 
                 a++ +aka +i +ds t y +a ++++tv   +atv   a+++l a+ +a++t++ g   ++ g l+g+
  MMETSP1325-20131115|3804_1  55 AEADGAKAISIAVDSKTDYPAACNATETVLLHEATVNtcAETVLRALRQANVTLKAGPRAIELGLLTGA 123
                 6778999*****************9999999999986559**************999999999877764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 1212.27
//
Query:       MMETSP1325-20131115|3808_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.058   13.2   2.3        0.1   12.4   0.1    1.9  2  PF00542.14 Ribosomal protein L7/L12 C-terminal domain
       0.19   11.6   2.3        0.2   11.5   1.6    1.1  1  PF03245.8  Bacteriophage lysis protein


Domain annotation for each model (and alignments):
>> PF00542.14  Ribosomal protein L7/L12 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1     0.061   4.1e+02      45      56 ..      10      21 ..       2      25 .. 0.71
   2 ?   12.4   0.1   1.5e-05       0.1      27      56 ..      25      54 ..      22      55 .. 0.93

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.061
  PF00542.14 45 gvskeeAeeikk 56
                ++ + eAe+ik 
  MMETSP1325-20131115|3808_1 10 KAREREAESIKR 21
                455678888875 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 1.5e-05
  PF00542.14 27 gLkeAKdlVesapkevkegvskeeAeeikk 56
                 L eAK + +++p +v+e+  ++  eei++
  MMETSP1325-20131115|3808_1 25 ALEEAKAFKDALPGKVTEAWARATVEEIEN 54
                599***********************9975 PP

>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.6     3e-05       0.2      20      67 ..       3      49 ..       1      55 [. 0.80

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3e-05
   PF03245.8 20 naeiedlqarqravaeldakhteeLadaksendrLradvaaGrrRLrv 67
                +a+ e  +ar+r+ ae  ++h + L++ak+ +d+L  +v ++  R  v
  MMETSP1325-20131115|3808_1  3 KARAELAKARERE-AESIKRHRQALEEAKAFKDALPGKVTEAWARATV 49
                5666667777774.66678*****************999988777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       721  (0.0527355); expected 273.4 (0.02)
Passed bias filter:                      547  (0.0400088); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.33s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|3807_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 798.79
//
Query:       MMETSP1325-20131115|3805_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-17   60.0   5.4    3.9e-07   29.4   0.0    3.5  3  PF00023.25 Ankyrin repeat
    1.3e-16   60.5   0.9    1.6e-08   34.6   0.0    2.4  2  PF13637.1  Ankyrin repeats (many copies)
      2e-16   59.9   0.9    1.4e-14   54.0   0.9    2.4  2  PF12796.2  Ankyrin repeats (3 copies)
    1.3e-15   56.8   2.7    3.9e-06   26.7   0.1    2.7  3  PF13857.1  Ankyrin repeats (many copies)
    1.1e-07   31.2   0.9     0.0021   18.0   0.0    3.2  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   1.4e-10   3.9e-07       2      32 ..       8      38 ..       7      39 .. 0.96
   2 !   24.1   0.1   6.8e-09   1.9e-05       2      33 .]      41      72 ..      40      72 .. 0.96
   3 !    7.6   0.3    0.0011       3.1       2      28 ..      74     100 ..      73     102 .. 0.93

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 1.4e-10
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                G T+LH+Aa++g+ + v+ L + G d+na +
  MMETSP1325-20131115|3805_1  8 GSTALHCAAFKGHDDTVRILYKLGSDPNAAN 38
                89***************************87 PP

  == domain 2    score: 24.1 bits;  conditional E-value: 6.8e-09
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                G TP H Aal g  ++v lL   GAd+n +d+
  MMETSP1325-20131115|3805_1 41 GVTPCHAAALEGKESIVHLLAHFGADINKTDN 72
                89***************************997 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0011
                 SCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdl 28 
                 G TP   Aa+  +l  ++ L+  GA+ 
  MMETSP1325-20131115|3805_1  74 GLTPIGAAACEHHLASIQALILLGAST 100
                 99***********************96 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   5.9e-12   1.6e-08       2      53 ..       9      60 ..       8      61 .. 0.97
   2 !   31.7   0.1   4.8e-11   1.3e-07       1      51 [.      41      94 ..      41      96 .. 0.83

  Alignments for each domain:
  == domain 1    score: 34.6 bits;  conditional E-value: 5.9e-12
   PF13637.1  2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                 taLh aa +g+ ++v+ L++ g d+n+ +  G t+ h Aal g  +i++lL
  MMETSP1325-20131115|3805_1  9 STALHCAAFKGHDDTVRILYKLGSDPNAANVTGVTPCHAAALEGKESIVHLL 60
                69***********************************************998 PP

  == domain 2    score: 31.7 bits;  conditional E-value: 4.8e-11
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAa.lrg..nieilk 51
                g+t+ h aa  g + +v+lL  +g+din+td++G t++  Aa ++    i++l 
  MMETSP1325-20131115|3805_1 41 GVTPCHAAALEGKESIVHLLAHFGADINKTDNEGLTPIGAAAcEHHlaSIQALI 94
                579******************99*****************76355434455554 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.9     5e-18   1.4e-14       1      84 [.      12      99 ..      12     103 .. 0.95
   2 ?   -3.0   0.0       3.1   8.6e+03      62      80 ..     194     212 ..     173     227 .. 0.60

  Alignments for each domain:
  == domain 1    score: 54.0 bits;  conditional E-value: 5e-18
   PF12796.2  1 LhlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgad 84
                Lh+Aa +g+ ++v++L + g d++     g tp+h+Aa  g+  iv lL   gad+n +d+eg tp+ +A++ +hl  ++ L+  ga+
  MMETSP1325-20131115|3805_1 12 LHCAAFKGHDDTVRILYKLGSDPNAanvtGVTPCHAAALEGKESIVHLLAHFGADINKTDNEGLTPIGAAACEHHLASIQALILLGAS 99
                8***********************99888899************************************************99988775 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 3.1
   PF12796.2  62 pLhlAvrnghlelvklLle 80 
                 +L lA   g+ ++  lL+e
  MMETSP1325-20131115|3805_1 194 ALWLARAIGQPDTGTLLVE 212
                 3334444444444444443 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.1   1.4e-09   3.9e-06      11      56 .]       3      48 ..       1      48 [. 0.93
   2 !   26.7   0.1   1.5e-09   4.1e-06       8      56 .]      33      81 ..      32      81 .. 0.95
   3 !   16.3   0.0   2.7e-06    0.0074       1      36 [.      59      94 ..      59     100 .. 0.88

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 1.4e-09
   PF13857.1 11 atdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                a d +g+t+Lh Aa +g+ + vr+L++ g+d+n+ +  g t+ + A
  MMETSP1325-20131115|3805_1  3 AVDSRGSTALHCAAFKGHDDTVRILYKLGSDPNAANVTGVTPCHAA 48
                5789999*******************************99998876 PP

  == domain 2    score: 26.7 bits;  conditional E-value: 1.5e-09
   PF13857.1  8 dvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                d+na + +g+tp h Aa  g  ++v lL ++gad+n +d++glt++  A
  MMETSP1325-20131115|3805_1 33 DPNAANVTGVTPCHAAALEGKESIVHLLAHFGADINKTDNEGLTPIGAA 81
                79999****************************************9766 PP

  == domain 3    score: 16.3 bits;  conditional E-value: 2.7e-06
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLl 36
                Ll+h+ ad+n td++g tp+  Aa  ++l  ++ L+
  MMETSP1325-20131115|3805_1 59 LLAHFGADINKTDNEGLTPIGAAACEHHLASIQALI 94
                788889***********************9999999 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   7.7e-07    0.0021       2      30 .]       8      36 ..       7      36 .. 0.95
   2 !    9.8   0.0   0.00034      0.93       2      30 .]      41      69 ..      40      69 .. 0.92
   3 ?   -0.1   0.1      0.53   1.5e+03       2      26 ..      74      98 ..      73     101 .. 0.77

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 7.7e-07
   PF13606.1  2 GnTpLhlAasngrielveaLlengadina 30
                G T+Lh+Aa +g+ + v++L + g d+na
  MMETSP1325-20131115|3805_1  8 GSTALHCAAFKGHDDTVRILYKLGSDPNA 36
                77*************************96 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00034
   PF13606.1  2 GnTpLhlAasngrielveaLlengadina 30
                G Tp h Aa  g+ ++v++L   gadin+
  MMETSP1325-20131115|3805_1 41 GVTPCHAAALEGKESIVHLLAHFGADINK 69
                6688899********************96 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.53
   PF13606.1  2 GnTpLhlAasngrielveaLlenga 26
                G Tp+  Aa   +++ ++aL+  ga
  MMETSP1325-20131115|3805_1 74 GLTPIGAAACEHHLASIQALILLGA 98
                7788877777778888999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.59
# Mc/sec: 1080.39
//
Query:       MMETSP1325-20131115|3810_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        8.9    5.6   7.3         12    5.2   5.1    1.3  1  PF10895.3 Protein of unknown function (DUF2715)


Domain annotation for each model (and alignments):
>> PF10895.3  Protein of unknown function (DUF2715)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   5.1   0.00086        12      31      98 ..      42     132 ..      22     148 .] 0.72

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.00086
   PF10895.3  31 kavkqatkrketpliGldvgvvaenGlalavtvdaaLtrlmfraqallGyalrvG.......................afrlipslgldvl 98 
                  +   at +++t  +G+dvgv ++ G+   +++da+    m    a +G + rv                        +++  p++g+  +
  MMETSP1325-20131115|3810_1  42 AGWDVATIETQTADLGVDVGVGVDVGVGADLDIDAGVGVGMSSPTASVGVSARVPvnsmetqttplplfqpgvsgtgvGTAGSPAIGMTTI 132
                 44445666679999************************99999999999999998666666666666666666666555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.31s 00:00:00.74 Elapsed: 00:00:00.70
# Mc/sec: 506.66
//
Query:       MMETSP1325-20131115|3811_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 388.38
//
Query:       MMETSP1325-20131115|3806_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   10.8   0.1       0.11   10.7   0.1    1.1  1  PF03063.15 Prismane/CO dehydrogenase family


Domain annotation for each model (and alignments):
>> PF03063.15  Prismane/CO dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   7.8e-06      0.11      62     132 ..      13      87 ..       3     119 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 7.8e-06
                 GGSTTT--SHHHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHCTC--.SC..HH..HHHHTTSHHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xx..xxxxxxxxxxxxxxxxxx RF
  PF03063.15  62 ktltnvnfddeeklkalaealgieeelksieelakevaevaledlskeeee..di..rslkellpkglkglyaeh 132
                 + ++  + +d+e ++++a+ +gi+++ ++++++ +eva++ ++ l +e  +  +i    l++l +k l++l  +h
  MMETSP1325-20131115|3806_1  13 ADIKRHQLTDNETVHEIAHGFGIKTSERKERDIKNEVARALVNILTAEPSRgsPIcrAGLEALKLKDLRKLIDQH 87 
                 456778999******************************999999877544112211345555566665555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       507  (0.0370831); expected 273.4 (0.02)
Passed bias filter:                      448  (0.0327677); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 622.03
//
Query:       MMETSP1325-20131115|3814_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|3815_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 474.83
//
Query:       MMETSP1325-20131115|3817_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00087   19.1   1.0     0.0011   18.8   0.7    1.1  1  PF02297.12 Cytochrome oxidase c subunit VIb
  ------ inclusion threshold ------
      0.077   12.6   3.7       0.21   11.2   0.2    2.0  2  PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
       0.31   11.1   2.4       0.42   10.6   1.7    1.3  1  PF08991.5  Domain of unknown function (DUF1903)


Domain annotation for each model (and alignments):
>> PF02297.12  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.7   2.3e-07    0.0011       3      47 ..       4      58 .]       3      58 .] 0.86

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 2.3e-07
  PF02297.12  3 fPnknerkaCweardeYfkCldkkge..........daneCkaerkeyesnCpks 47
                 P+++  ++C +a +++ +Cl+ ++           + ++Ck+   e+   C +s
  MMETSP1325-20131115|3817_1  4 PPSTSMAERCEQAKIAFQECLETTTLpdakrpqveaELQQCKNTLMEMTTACNQS 58
                599999*****************99887777777666666************876 PP

>> PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   4.7e-05      0.21      30      57 ..       8      35 ..       3      43 .. 0.82
   2 ?    4.0   0.2     0.008        37      18      37 ..      39      57 ..      35      58 .] 0.84

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.7e-05
   PF08583.5 30 kavgkCneekeamkkClkeyrtderlkd 57
                ++   C++ k a+++Cl  ++  ++++ 
  MMETSP1325-20131115|3817_1  8 SMAERCEQAKIAFQECLETTTLPDAKRP 35
                78889*************9999998854 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.008
   PF08583.5 18 kafaeChkdrtlkavgkCne 37
                +++++C +  ++++  +Cn+
  MMETSP1325-20131115|3817_1 39 AELQQCKN-TLMEMTTACNQ 57
                57889988.99999999996 PP

>> PF08991.5  Domain of unknown function (DUF1903)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.7   9.2e-05      0.42       3      39 ..      12      48 ..      10      58 .] 0.86

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9.2e-05
   PF08991.5  3 pCkkqACaIQkCLkenkydeskCekviedlykCCakf 39
                 C++   a Q+CL+++   ++k  +v  +l++C ++ 
  MMETSP1325-20131115|3817_1 12 RCEQAKIAFQECLETTTLPDAKRPQVEAELQQCKNTL 48
                5999999*************************97665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       517  (0.0378145); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|3812_1  [L=364]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-11   41.3   0.2    6.3e-11   41.3   0.2    1.8  2  PF00018.23 SH3 domain
    4.8e-10   38.6   0.0    9.2e-10   37.7   0.0    1.5  1  PF07653.12 Variant SH3 domain
     0.0042   16.6   0.0     0.0061   16.1   0.0    1.1  1  PF06682.7  Protein of unknown function (DUF1183)


Domain annotation for each model (and alignments):
>> PF00018.23  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.4       1.1   5.2e+03       3      18 ..     168     183 ..     168     184 .. 0.81
   2 !   41.3   0.2   1.4e-14   6.3e-11       8      48 .]     317     356 ..     316     356 .. 0.96

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1.1
                 SS-BE-SSTTS-EB-T CS
  PF00018.23   3 lYDYearesdELsfkk 18 
                 +Y ++  ++ +  fk+
  MMETSP1325-20131115|3812_1 168 IYNFNTDDDTDFYFKQ 183
                 7999999999887776 PP

  == domain 2    score: 41.3 bits;  conditional E-value: 1.4e-14
                 -SSTTS-EB-TT-EEEEEEESSSSEEEEEETTTTB---EEG CS
  PF00018.23   8 aresdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 a+e+dE+++k+G+v++v+ ++ +gWw+g + + g++G++P+
  MMETSP1325-20131115|3812_1 317 AEEADEMTMKEGEVVTVVREDPSGWWEGINAK-GERGIFPA 356
                 789****************************8.7******7 PP

>> PF07653.12  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.0     2e-13   9.2e-10       7      54 ..     314     361 ..     310     362 .. 0.92

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 2e-13
                 -B--SS-----B----EEEEE.E-S----BEEEE.-TT---B--HHHHH CS
  PF07653.12   7 dyvaedpeeLslkkGDvikvlgskesdgwweges.gGrvGlfPsslVee 54 
                 ++ ae   e++ k+G+v+ v+ ++++ gwweg + +G++G+fP +++ee
  MMETSP1325-20131115|3812_1 314 THIAEEADEMTMKEGEVVTVV-REDPSGWWEGINaKGERGIFPANHLEE 361
                 577899999************.99999*******************998 PP

>> PF06682.7  Protein of unknown function (DUF1183)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.3e-06    0.0061     143     266 ..     217     352 ..     206     362 .. 0.46

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.3e-06
   PF06682.7 143 gevsgesseesgee....vslllvvivllvlalilyklflssgevsresrseeagydsggggggGg..gggdlesan.gppppyfkssfpgsaglsakpssgyg......sagtrsqgeqgwrpGfWtGlaaGallG 266
                 ++++g+s+++ g+     v +++v+++++  ++ +yk +l+ g+   +++  + + +s  ggg+ +  +++ +  ++  +  p +  ++ gs+ +++++           ++g+  +   +  +G+W G+ a +  G
  MMETSP1325-20131115|3812_1 217 SSSNGSSNDDDGDAgvtaVVVIVVLLCVAAACWFVYKYVLKLGTDASTPKTVQMKPTS-TGGGKVNvpTSNPVTTMTpTAGAPLEVAKVGGSKRICKHTHIAEEademtmKEGEVVTVVREDPSGWWEGINAKGERG 352
                 2333334444333333224444444555666799999999877765555554444444.333333333222222222233333333333333333333322222222222233333334444789999998877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       520  (0.0380339); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.36s 00:00:01.06 Elapsed: 00:00:00.54
# Mc/sec: 1615.32
//
Query:       MMETSP1325-20131115|3818_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 552.20
//
Query:       MMETSP1325-20131115|3819_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-23   79.9   0.0    1.1e-22   79.8   0.0    1.2  1  PF07717.11 Oligonucleotide/oligosaccharide-binding (OB)-fold
    2.4e-16   59.4   0.0    3.9e-16   58.8   0.0    1.3  1  PF04408.18 Helicase associated domain (HA2)


Domain annotation for each model (and alignments):
>> PF07717.11  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   1.5e-26   1.1e-22       2     109 ..     117     224 .]      41     224 .] 0.89

  Alignments for each domain:
  == domain 1    score: 79.8 bits;  conditional E-value: 1.5e-26
                 HHHHHHHHTT----.................---TTSTTHHHHHHHHHH---TTSEEE.------EETT.G-B-EE-TTS---..---.SEEEEEEEEESSSEEEEEEEE--HHHHHHH-T CS
  PF07717.11   2 QLrelledlglkeeaak...........asrssenesakdaellrkallaGlypniarldekgdYktvr.kqrvfiHpsSvla.ekkppewvvyaelvetsklymrnvtaiepewllllap 109
                 QL+             +            +r++ +++ +d   lrk+ll+G+++++arl ++g Y+tvr ++ v++Hp+Svla +  ppe+vv++e v    +y+r++++ie +wl+++ap
  MMETSP1325-20131115|3819_1 117 QLT-------------GymrriappgfqGARDELPSCGEDTVSLRKCLLSGYFSHAARLGPDGLYHTVRgGHVVQLHPTSVLAkFGAPPEFVVFHEYVSVGSEYIRDCSRIEGKWLTEIAP 224
                 333.............25555555555589999**************************************************9999*************89****************997 PP

>> PF04408.18  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   5.7e-20   3.9e-16      19     102 .]       5      80 ..       2      80 .. 0.88

  Alignments for each domain:
  == domain 1    score: 58.8 bits;  conditional E-value: 5.7e-20
                 ------GGGSSS-HHHHHHH---GGGT-HHHHHHHHHHHTS---B---TTGHHHHHH..HHHTT-----.........-HHHHH CS
  PF04408.18  19 TdlGkklaelPldprlakmLllsaefgcldeiltivallsvdsiflnpdkkkenaekdnaknkfkikearrklshpdgDhltll 102
                 T++G++la++P++p+lak+Ll+s   gc+dei+ti+a+lsv++++ +p+ ++++++k      +  ++a +++   +gDh+tll
  MMETSP1325-20131115|3819_1   5 TPVGEQLADFPVEPKLAKCLLESWDRGCADEIVTIAAALSVKQVWAHPRGSRAAKDK------L--DAAMAEFAVGEGDHITLL 80 
                 6**********************************************9877776665......5..44446788899*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1095.48
//
Query:       MMETSP1325-20131115|3820_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|3813_1  [L=454]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-50  169.8   0.0    5.4e-41  140.4   0.0    2.1  2  PF00141.18 Peroxidase
  ------ inclusion threshold ------
      0.014   15.6   0.1      0.042   14.0   0.0    1.8  1  PF12867.2  DinB superfamily


Domain annotation for each model (and alignments):
>> PF00141.18  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   2.5e-10   1.7e-06     146     229 .]       2     128 ..       1     128 [. 0.80
   2 !  140.4   0.0   7.9e-45   5.4e-41       4     229 .]     185     424 ..     182     424 .. 0.91

  Alignments for each domain:
  == domain 1    score: 27.5 bits;  conditional E-value: 2.5e-10
                 -TT-----TT...........................T--..........-..---.....----THHHHHHHH.................................--EE-HHHHHHHHSH..HHHHHHHHHHH- CS
  PF00141.18 146 aHtiGkahcssfsrlya...aadpaldaayage.kC.asgnte.......vdldtp.....tkfdnsyfknlle.................................krgllrsDlallsds..etralvekyars 229
                 +H++Gk+h++           +dp  d+a      C + ++ +            p     t++dn+y++nll+                                 + ++++sD +ll+d+  e+ ++ve++a++
  MMETSP1325-20131115|3813_1   2 GHSFGKTHGA-----CPdgaGPDPVEDPANPWPgLCgTGKGIDaftsgfeG----PwttnpTSWDNEYYTNLLNydwtlsqspaehpywvvaedspvapaadgngtqHLMMMTSDISLLHDPegEYIKIVEQFAKD 128
                 7999999965.....212347777777776665788544443445533331....244445*************************************************************88999******986 PP

  == domain 2    score: 140.4 bits;  conditional E-value: 7.9e-45
                 HHHHHHHH...TT---HHHHHHHHHHTT-......--TTTTGGGSTTGGG-------HHHHHHHHHHHHHSTT........S-HHHHHHHHHHHHHHH-----.--EE----------......--......HHHHHHHHH----HHHHHHH.---TT-----TT......................T--...-..-------THHHHHHHH.................--EE-HHHHHHHHSHHHHHHHHHHHH- CS
  PF00141.18   4 dvkaalka..drdmgpsllrlafhdcfvy......gGcdgsvlllapektapaNaslrkgldvldaikakleaacpg...tvScADlialaardavelaggplvpvslGRrDatessa.sevsnlPdpkasadelrdkfarkgltdeelvaL.sGaHtiGkahcssfsrlyaaadpaldaayagekCasgntevdldtptkfdnsyfknlle.................krgllrsDlallsdsetralvekyars 229
                 +v++++    d +++p+l+rla++++ ++      gGc+g++l+lap++ +p N++l++ l++l ++ +k+e++ +g    +S+ADli+l a++a+ +agg  ++++ GR Da++ +  s+    P+  +s++ lr+ f+ +glt++e v++ +G+H++G+ +         a+ + +++a+ag+        + + tp +++n+yfknl                   +  +++ Dl l+ dse++ lv++ a++
  MMETSP1325-20131115|3813_1 185 SVEELIAGsdDEELAPALVRLAWQCASTFrqtdyqGGCNGARLRLAPQNAWPVNEGLDATLEALAPVMEKIEEKAKGgggALSWADLIVLSANVALGNAGGRDMQFCGGRVDALDGDLgSQY-LAPKDITSVAVLREAFSVMGLTPRESVVMmGGMHSLGNES---------APLSLVGPAVAGGVG------SWTATPAELNNEYFKNLATekweaygtagqykavgkHLYMSAQDLMLKFDSELNYLVQELAQD 424
                 5555555556899************************************************************88665557*********************88**************7777.78999************************9**********.........466678888887622......33449******************************999*********************9986 PP

>> PF12867.2  DinB superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   6.1e-06     0.042      47      95 ..     151     199 ..     134     214 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 6.1e-06
   PF12867.2  47 lerlrgeeaprpayddltdpslaealaylaevrarllellealtdadle 95 
                 + r+ g++ p+++++ +  p+++ +la +++v + + el+++ +d++l+
  MMETSP1325-20131115|3813_1 151 ITRCLGDNVPPAQDWQYPLPDAPAVLADFDAVAESVEELIAGSDDEELA 199
                 4577799999999999999*************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 2014.71
//
Query:       MMETSP1325-20131115|3822_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|3823_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.3e-08   32.4   0.0    7.5e-08   32.1   0.0    1.0  1  PF06974.8 Protein of unknown function (DUF1298)


Domain annotation for each model (and alignments):
>> PF06974.8  Protein of unknown function (DUF1298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   5.5e-12   7.5e-08      45     151 ..       8     115 ..       3     117 .. 0.88

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 5.5e-12
   PF06974.8  45 ealltyviiklvlkvfGikvaaalvkrivsnttltfsnvvGPkEeisfvghpisyiaass.yghphaltihlqsYvnkiiislavdetvipDphklcddleeslklik 151
                    + + +i+++ kv+  +    l++    +++l+fsnv+G   e sf g  ++ i   + +     l   ++sY +ki++    d+ ++ Dp  +   lee   l++
  MMETSP1325-20131115|3823_1   8 AVPVAMLFIRMTTKVLSNQLCRRLQYTYSAKASLIFSNVMGSPTEASFLGSKVTGIMGFVpLPGKLGLGCTVTSYNGKIKLGFCADPIALVDPPLFKRLLEEEYDLMR 115
                 55678899**********************************************998765256677899999*********************888888887777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 548.98
//
Query:       MMETSP1325-20131115|3824_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   12.1   8.2      0.031   11.8   5.7    1.0  1  PF13514.1  AAA domain
      0.061   12.8   6.6        0.1   12.1   0.5    2.1  2  PF05227.8  CHASE3 domain
      0.085   12.6   3.6       0.11   12.3   2.5    1.2  1  PF09845.4  Zn-ribbon containing protein (DUF2072)
       0.16   11.8  13.4       0.97    9.3   2.7    2.1  2  PF02050.11 Flagellar FliJ protein
       0.19   10.5   9.6       0.22   10.3   6.6    1.1  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.24   11.4   3.8       0.29   11.2   2.7    1.1  1  PF03750.8  Protein of unknown function (DUF310)
       0.49   10.2  13.1       0.71    9.7   9.1    1.3  1  PF13863.1  Domain of unknown function (DUF4200)
        0.5    8.8  11.3        1.2    7.6   7.8    1.5  1  PF08317.6  Spc7 kinetochore protein
       0.63   10.0   2.3        1.1    9.2   0.1    2.2  2  PF12537.3  Protein of unknown function (DUF3735)
       0.69    9.6   9.4          4    7.2   2.7    2.4  2  PF12329.3  TATA element modulatory factor 1 DNA binding
       0.79    9.3  13.0       0.43   10.2   3.3    2.0  2  PF08614.6  Autophagy protein 16 (ATG16)
          1    9.5   9.3       0.24   11.6   2.3    2.0  2  PF06156.8  Protein of unknown function (DUF972)
        1.4    6.5   7.0        1.6    6.3   4.9    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
        1.8    8.5   9.5        8.8    6.2   6.6    1.9  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        1.9    8.1  11.7        5.3    6.6   8.1    1.7  1  PF07926.7  TPR/MLP1/MLP2-like protein
          2    8.1   7.4         10    5.8   2.8    2.3  2  PF06009.7  Laminin Domain II
        4.6    6.4  10.2        2.1    7.5   2.0    2.0  2  PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4


Domain annotation for each model (and alignments):
>> PF13514.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   5.7   3.8e-05     0.031     743     839 ..      13     107 ..       4     110 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.8e-05
   PF13514.1 743 eeikellkeaddlrkriealeedlarfeeevealakalapellgeeaeeavralkqrlkraredaaalerlkeeleeaeeeleeaaealeeaeaele 839
                 ++i+ + +e+ +++kr + ++e l++  +ev++ +  ++ +  ++e e+ +++l     +a + +++l rl+e+ e+ +++l+ a++++   +++++
  MMETSP1325-20131115|3824_1  13 DQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETEDHLSQLTI--REAGRYQQELSRLQEASEQTDDKLNMAQNNIFRGNEKMD 107
                 5788999*********************************9999999999999875..58999**********************999877666665 PP

>> PF05227.8  CHASE3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.5   0.00013       0.1      49      99 ..       6      56 ..       2      69 .. 0.88
   2 ?    4.0   1.4      0.04        33      56      99 ..      61     107 ..      51     114 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00013
   PF05227.8 49 aqieeeleelrrltsdnpeqqerldrlealieqkleeleetialrreggle 99
                a+i+++ ++++ ++ +  eq +rl+ + + +++ ++e++ t al+++++ e
  MMETSP1325-20131115|3824_1  6 AEIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKE 56
                68999****************************************996555 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.04
   PF05227.8  56 eelrrltsdnp....eqqerldrlealieqkleeleetialrreggle 99 
                 ++l++lt  +     ++++rl++++++ ++kl+ +++ i   +e +++
  MMETSP1325-20131115|3824_1  61 DHLSQLTIREAgryqQELSRLQEASEQTDDKLNMAQNNIFRGNE-KMD 107
                 55666664332222267778999999999999999888866666.544 PP

>> PF09845.4  Zn-ribbon containing protein (DUF2072)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.5   0.00014      0.11      42     109 ..      17      86 ..       4      98 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00014
   PF09845.4  42 eseaev.teeksveeveeetdeeleevkedrekse.kskekeeeeriEsvrilepGsYelNlekLlerde 109
                  +++ev +++k ++ + e+ ++ ++ev++    ++ k+ke+e+e+++  + i e G+Y+  l++L e  e
  MMETSP1325-20131115|3824_1  17 GHVDEVgEQKKRLAIMDEHLKNVFQEVQHTTALVNaKKKEIETEDHLSQLTIREAGRYQQELSRLQEASE 86 
                 33444414566777788888999999988776654166788999*********************98766 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.7    0.0012      0.97      49     106 ..       3      60 ..       1      64 [. 0.92
   2 ?    8.6   1.6     0.002       1.6      40      82 ..      64     106 ..      57     114 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0012
  PF02050.11  49 nyqafisaldeaiaqqqqeleqaekqveqareewqeanqelkklekLeerekkkeqke 106
                   +a i++ +++i+ +  e+ + +k++    e+++   qe++    L + +kk+ + e
  MMETSP1325-20131115|3824_1   3 ELHAEIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETE 60 
                 678889******************************************9999987665 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.002
  PF02050.11  40 qglsaaelrnyqafisaldeaiaqqqqeleqaekqveqareew 82 
                 ++l++ e   yq+ +s+l+ea +q   +l+ a++++ +  e++
  MMETSP1325-20131115|3824_1  64 SQLTIREAGRYQQELSRLQEASEQTDDKLNMAQNNIFRGNEKM 106
                 4678999999**********************99987666665 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   6.6   0.00028      0.22      52     140 ..       9      98 ..       1     105 [. 0.87

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00028
   PF10186.4  52 nekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklns.les 140
                 +++k +++ +  ev ++k+r++ + +++++  +e++ + ++++++k+++++  +  + +  +  r +++l++lqe++++t++kln+ +++
  MMETSP1325-20131115|3824_1   9 QKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETEDHLSQLTIREAGRYQQELSRLQEASEQTDDKLNMaQNN 98 
                 4467777888889999***********************************99966699999************************5544 PP

>> PF03750.8  Protein of unknown function (DUF310)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   2.7   0.00036      0.29       8      95 ..      10      96 ..       3     110 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00036
   PF03750.8  8 eeakelvkkAeklgkelarkklktsqiRklfeevrsiekkkdsrdeeikkelkllkpkLAyqvGrekealeelkevldkaldkvdedl 95
                +++ ++  + +++g++ +r  +    ++++f+ev++  + ++++++ei++e +l +  +  ++Gr++++l++l+e  +++ dk++   
  MMETSP1325-20131115|3824_1 10 KHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETEDHLSQLTI-REAGRYQQELSRLQEASEQTDDKLNMAQ 96
                5566777788999*999999999*************99999998888777766554444.589**********999888877774443 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   9.1   0.00088      0.71      10     108 ..       2      96 ..       1      97 [. 0.95

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00088
   PF13863.1  10 eevqlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekleekleeyq 108
                 +e+++++++ + +ie    e+ e++++l+ ++e l+  +++++  +   +ak+    k++e+e ++ +   +e  + +++l++l++  e++++kl+  q
  MMETSP1325-20131115|3824_1   2 RELHAEIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKK----KEIETEDHLSQLTIREAGRYQQELSRLQEASEQTDDKLNMAQ 96 
                 57899**********************************************99....99***********************************98665 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.8    0.0015       1.2     152     258 ..       6     111 ..       2     115 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0015
   PF08317.6 152 eeLeenleelkedeellnkklelinsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselle 258
                 +e++++ ++++   +++ ++ +++  + ++l++ +++++++ a  ++ k+e+e  d+     +re     ++++++ ++  e+  ++l+  +++i  ++ek+ +++ 
  MMETSP1325-20131115|3824_1   6 AEIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETEDHLSQLTIREA-GRYQQELSRLQEASEQTDDKLNMAQNNIFRGNEKMDQFKL 111
                 444444455555555555555555555555555555555555555555555555555555555443.3334555555555555555555555555555555555555 PP

>> PF12537.3  Protein of unknown function (DUF3735)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1    0.0013       1.1      46      71 .]      33      58 ..       5      58 .. 0.85
   2 ?    0.4   0.1      0.76   6.1e+02      46      64 ..      75      93 ..      62      99 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0013
   PF12537.3 46 erdinnlerrlnhttsllakkkkele 71
                +++++n  ++ +htt+l+++kkke+e
  MMETSP1325-20131115|3824_1 33 DEHLKNVFQEVQHTTALVNAKKKEIE 58
                78999999***************986 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.76
   PF12537.3 46 erdinnlerrlnhttslla 64
                ++++++l++  ++t+++l+
  MMETSP1325-20131115|3824_1 75 QQELSRLQEASEQTDDKLN 93
                7788999999999999886 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1     0.016        13      44      70 ..       3      29 ..       1      33 [. 0.83
   2 ?    7.2   2.7    0.0049         4      27      71 ..      41      86 ..      32      89 .. 0.92

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.016
   PF12329.3 44 elekeieelkkkleklekeleeleerl 70
                el +ei++ k+++e    e+ e ++rl
  MMETSP1325-20131115|3824_1  3 ELHAEIQKHKDQIEGHVDEVGEQKKRL 29
                788899999999999999999999988 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0049
   PF12329.3 27 kelkhnntikkLrkknkelekeieelk.kkleklekeleeleerlk 71
                +e +h++++ + +kk+ e e  +++l+ ++  + ++el++l+e  +
  MMETSP1325-20131115|3824_1 41 QEVQHTTALVNAKKKEIETEDHLSQLTiREAGRYQQELSRLQEASE 86
                799***********************889999*********98665 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.3   0.00053      0.43      92     157 ..       3      67 ..       1      71 [. 0.89
   2 ?    4.0   1.7     0.042        34      88     125 ..      69     106 ..      60     114 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00053
   PF08614.6  92 elaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkekekaletlqDElasln 157
                 el  ++ ++++++e    e  e++k+la + +++k+  +e+++    +++k+k +et +D l+ l+
  MMETSP1325-20131115|3824_1   3 ELHAEIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIET-EDHLSQLT 67 
                 677889999**********************************************98.66666665 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.042
   PF08614.6  88 kkrgelaqrllllneeleekreeiaekekelaelqsei 125
                 ++ g+ +q+l +l+e+ e+ + ++++ ++++ + ++++
  MMETSP1325-20131115|3824_1  69 REAGRYQQELSRLQEASEQTDDKLNMAQNNIFRGNEKM 106
                 45566677777777777777666666666665544444 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.3    0.0003      0.24      19      77 ..       7      62 ..       2      70 .. 0.71
   2 ?    1.4   0.4      0.43   3.5e+02      43      57 ..      76      90 ..      61     112 .. 0.44

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.0003
   PF06156.8 19 elleeleelkkelkelleenaelkleneklrerleeleeeekkkekkkkkkklgegkdn 77
                e++++ ++++ ++ e+ e+ ++l +  e+l++ ++e++++++  ++kkk+ +    +d+
  MMETSP1325-20131115|3824_1  7 EIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIE---TEDH 62
                4566677899999***********************9985444444433333...3333 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.43
   PF06156.8 43 leneklrerleelee 57
                 e ++l+e  e++++
  MMETSP1325-20131115|3824_1 76 QELSRLQEASEQTDD 90
                333333332222222 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   4.9     0.002       1.6      64     137 ..       7      90 ..       2     113 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.002
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..........XXXXX.....XXXXXXXX. CS
  PF01496.14  64 peskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenk..........veelrelssldeefkalra 137
                 + +k+ +++e +++e+ e+ k++  ++e L++ ++e + ++++++ +k+++e ++           + ++els+l+e+ ++ ++
  MMETSP1325-20131115|3824_1   7 EIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETEDhlsqltireaGRYQQELSRLQEASEQTDD 90 
                 556678899999999999999999999999999999999999999999999997666655554443333366666666666652 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.6     0.011       8.8      28     104 ..      26      99 ..       2     101 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS CS
  PF02403.17  28 vdelleldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaeleklllsi 104
                  ++l  +de+ +++ +e++   a  N+  keI+         +  i+e+   ++el+ l+++ ++ +++l+ +  +i
  MMETSP1325-20131115|3824_1  26 KKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETEDH---LSQLTIREAGRYQQELSRLQEASEQTDDKLNMAQNNI 99 
                 3455567777777788888888888888888877664...5678899999999999999999999999999877665 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   8.1    0.0066       5.3       4     101 ..      14     111 ..       2     114 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0066
   PF07926.7   4 eisslkeelkrlesqiaaieeqiqklkdDlenqaeiareaqdkYerelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeks 101
                 +i+   +e+ + +++ a ++e ++++ ++++  + ++++ +++ e+e ++   ti+e  ++++el++lq+  +++ ++++ a++++ + +ek+ + k 
  MMETSP1325-20131115|3824_1  14 QIEGHVDEVGEQKKRLAIMDEHLKNVFQEVQHTTALVNAKKKEIETEDHLSQLTIREAGRYQQELSRLQEASEQTDDKLNMAQNNIFRGNEKMDQFKL 111
                 4444444555555555556668888889999999999999999****************************************999888888877665 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   4.7     0.072        58      23      92 ..      26      96 ..       1      97 [. 0.60
   2 ?    5.8   2.8     0.013        10       8      65 ..      52     110 ..      36     115 .. 0.56

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.072
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXX......XXX CS
   PF06009.7 23 stnventkaklsklngsveetnekvksankavrdarrsvrkle.klapqlldkLkklkkleeasqsrv.lsr 92
                ++++  + + l+++ ++v++t+++v+++ k + + ++  ++l+  +a +  + L++l++ +e+   +  +++
  MMETSP1325-20131115|3824_1 26 KKRLAIMDEHLKNVFQEVQHTTALVNAKKKEI-ETEDHLSQLTiREAGRYQQELSRLQEASEQTDDKLnMAQ 96
                44555566667777777777788887666655.455556666524677777777777777777665555555 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.013
                 XXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7   8 AnetakeVlkelegis.tnventkaklsklngsveetnekvksankavrdarrsvrkle 65 
                 A+++  e+++ l+++   +  + +++ls+l++  e+t++k++ a++ +   ++++ + +
  MMETSP1325-20131115|3824_1  52 AKKKEIETEDHLSQLTiREAGRYQQELSRLQEASEQTDDKLNMAQNNIFRGNEKMDQFK 110
                 33333344444444432345677788888888878888888877777777777776655 PP

>> PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   2.0    0.0026       2.1      25      87 ..       2      63 ..       1      65 [. 0.88
   2 ?    3.6   0.7     0.042        34      22      51 ..      69      98 ..      62     108 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0026
   PF10018.4 25 qenqarikeLraeaeslDeqikdilkeLkearkeLkslpdqeksklssikkkqkrevsseeLL 87
                +e++a+i++ ++++e + +++ +  k L  +   Lk++  qe + +++  +++k+e+++e+ L
  MMETSP1325-20131115|3824_1  2 RELHAEIQKHKDQIEGHVDEVGEQKKRLAIMDEHLKNVF-QEVQHTTALVNAKKKEIETEDHL 63
                588999999999999999999999999999999999995.9999999***********99855 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.042
   PF10018.4 22 eehqenqarikeLraeaeslDeqikdilke 51
                +e    q+++++L++ +e+ D++++  +++
  MMETSP1325-20131115|3824_1 69 REAGRYQQELSRLQEASEQTDDKLNMAQNN 98
                56667899**************99877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1485  (0.108616); expected 273.4 (0.02)
Passed bias filter:                      702  (0.0513458); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.62
# Mc/sec: 448.35
//
Query:       MMETSP1325-20131115|3825_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-09   36.2   0.0      5e-09   35.7   0.0    1.2  1  PF00026.18 Eukaryotic aspartyl protease


Domain annotation for each model (and alignments):
>> PF00026.18  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   3.7e-13     5e-09     203     313 ..       2     109 ..       1     110 [. 0.94

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 3.7e-13
                 ----SEEE-HHHHHHHHHHH--EETS........SEEEETTGG-GS-EEEEETTS-EEEEEGGGGEEEC--STTSEEEESEEETT-ST--SSEEE--TTGGGEEEEEETTTTEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00026.18 203 tGTsllalpesivekiakavgaaese.......geyvvdCsslsslpdiaftvggkkitvsaselvlkesesasaiCilglqeldvpeegelwiLGdvFlrsaytvfdldnnrvglAe 313
                 +GT+l++lp+++ ++i ++v+ +  +         + vd s+l++ pdi+  + g + t+s+ ++ l  s+      ++g+++      +++ i+G+v l+   +vfd ++n++g+Ae
  MMETSP1325-20131115|3825_1   2 SGTTLIYLPSEVTSAIETKVESKVDSlessffqWSSCVDESELENFPDITLGLYGYDLTLSPYQYLLWYSDCY----YWGISS------SSIPIIGNVALQGKLVVFDKETNQIGFAE 109
                 8**********************99999999988889999***************************986654....799999......7899************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.59
# Mc/sec: 1035.71
//
Query:       MMETSP1325-20131115|3821_1  [L=523]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-10   39.8  10.1    1.9e-06   27.2   0.2    2.8  2  PF13414.1  TPR repeat
    9.7e-07   28.1  12.6     0.0023   17.5   1.8    3.5  3  PF07719.12 Tetratricopeptide repeat
     0.0004   20.8   4.8     0.0004   20.8   3.3    4.0  4  PF13432.1  Tetratricopeptide repeat
     0.0038   16.6  10.5        0.3   10.6   0.9    3.5  3  PF00515.23 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.021   14.4   2.2       0.28   10.9   0.1    3.0  2  PF13181.1  Tetratricopeptide repeat
      0.033   14.7   1.0      0.033   14.7   0.7    4.3  4  PF13428.1  Tetratricopeptide repeat
          2    8.3   8.3        3.1    7.7   0.4    3.0  3  PF13176.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.2   9.9e-10   1.9e-06       5      53 ..      29      93 ..      26     104 .. 0.80
   2 !   14.6   3.2   8.6e-06     0.017      24      67 ..     122     164 ..     118     166 .. 0.90

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 9.9e-10
   PF13414.1  5 alkelGnalfkegdydeAieayekAle.ldpnnae...............lyynlAlaylklgkd 53
                +++e+Gna+f +  ++eA+++y++Al+ ld +  +               l++n+A ++lkl ++
  MMETSP1325-20131115|3821_1 29 SAREQGNAAFAAEHFEEALALYDQALDeLDDERMDgdlsseasskaveavLLCNRATVLLKLHEQ 93
                6799**********************647744433445555567777888***********9865 PP

  == domain 2    score: 14.6 bits;  conditional E-value: 8.6e-06
   PF13414.1  24 eayekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67 
                 +a + A++ d ++ +++y+l++a++++g + +eA+ +++ Al+ 
  MMETSP1325-20131115|3821_1 122 AAARAAIKADRSCFKAHYRLSQALEQQG-RLHEAILAAQAALAC 164
                 56789***********************.589*********986 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   1.0   8.2e-06     0.016       6      29 ..      32      55 ..      29      59 .. 0.90
   2 ?   -3.1   0.0       4.8   9.3e+03       3      15 ..      79      91 ..      77      92 .. 0.79
   3 !   17.5   1.8   1.2e-06    0.0023       2      31 ..     136     165 ..     135     167 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 8.2e-06
                HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAleafekAle 29
                ++G+a++++ ++eeAl+++++Al 
  MMETSP1325-20131115|3821_1 32 EQGNAAFAAEHFEEALALYDQALD 55
                589*******************96 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 4.8
                HHHHHHHHHHHTT CS
  PF07719.12  3 alynlGlayyklg 15
                +l+n++ +++kl 
  MMETSP1325-20131115|3821_1 79 LLCNRATVLLKLH 91
                6899999999885 PP

  == domain 3    score: 17.5 bits;  conditional E-value: 1.2e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleld 31 
                 +a+y+l +a++++g++ eA+ a + Al+ +
  MMETSP1325-20131115|3821_1 136 KAHYRLSQALEQQGRLHEAILAAQAALACN 165
                 79*************************987 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   1.2   9.2e-05      0.18       2      27 ..      32      57 ..      31      70 .. 0.88
   2 !   20.8   3.3   2.1e-07    0.0004      15      61 ..     119     165 ..     117     171 .. 0.86
   3 ?   -1.2   2.1       1.7   3.3e+03      14      56 ..     222     264 ..     215     273 .. 0.83
   4 ?   -4.0   1.9         7   1.4e+04      44      61 ..     408     425 ..     404     436 .. 0.58

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 9.2e-05
   PF13432.1  2 alArallraGdydeAlaaleaalala 27
                ++++a+++a +++eAla++++al++ 
  MMETSP1325-20131115|3821_1 32 EQGNAAFAAEHFEEALALYDQALDEL 57
                689*******************9976 PP

  == domain 2    score: 20.8 bits;  conditional E-value: 2.1e-07
   PF13432.1  15 eAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalala 61 
                 +++aa +aa++++  +  a+++l +al ++grl eA+ + +aala +
  MMETSP1325-20131115|3821_1 119 KCEAAARAAIKADRSCFKAHYRLSQALEQQGRLHEAILAAQAALACN 165
                 6899*********************************8888887443 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 1.7
   PF13432.1  14 deAlaaleaalalaPeaaeallllaeallrlgrldeAaallra 56 
                 +eA+a+ +a+  +  e+  a  + a + +  g  d+Aaa+ ++
  MMETSP1325-20131115|3821_1 222 AEAQAIANAVANEGKENRPAVEASASIGASIGTADGAAAAQAE 264
                 6888888888888899999999999999999999999977665 PP

  == domain 4    score: -4.0 bits;  conditional E-value: 7
   PF13432.1  44 lgrldeAaallraalala 61 
                 ++  ++A++++++a++la
  MMETSP1325-20131115|3821_1 408 QKAKAKAERADAKAAKLA 425
                 555555555555555443 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.9   0.00015       0.3       8      29 ..      34      55 ..      32      56 .. 0.93
   2 ?    0.6   0.0      0.22   4.3e+02       1      15 [.      77      91 ..      77      92 .. 0.85
   3 !    8.6   0.8   0.00066       1.3       2      30 ..     136     164 ..     135     166 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00015
                HHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23  8 GnaylklgkydeAleyyekALe 29
                Gna +  + ++eAl+ y++AL 
  MMETSP1325-20131115|3821_1 34 GNAAFAAEHFEEALALYDQALD 55
                9*******************95 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.22
                HHHHHHHHHHHHHTT CS
  PF00515.23  1 akalynlGnaylklg 15
                a  l+n++ ++lkl 
  MMETSP1325-20131115|3821_1 77 AVLLCNRATVLLKLH 91
                5679********985 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.00066
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALel 30 
                 ka+y+l +a+ ++g++ eA+ + + AL  
  MMETSP1325-20131115|3821_1 136 KAHYRLSQALEQQGRLHEAILAAQAALAC 164
                 799*********************99975 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.13   2.5e+02      20      30 ..      39      49 ..      30      55 .. 0.64
   2 ?   10.9   0.1   0.00014      0.28       2      28 ..     136     162 ..     134     166 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.13
                HHHHHH---HH CS
   PF13181.1 20 Akeylekalel 30
                A e++e+al l
  MMETSP1325-20131115|3821_1 39 AAEHFEEALAL 49
                77777777765 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00014
                 --TTT---HHHHTT-HHHHHHHHH--- CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekal 28 
                 ka+y+l+++++q G+ ++A+ + + al
  MMETSP1325-20131115|3821_1 136 KAHYRLSQALEQQGRLHEAILAAQAAL 162
                 79*****************98888777 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.9     0.003       5.8       8      30 ..      34      56 ..      29      63 .. 0.85
   2 ?   14.7   0.7   1.7e-05     0.033       2      37 ..     136     173 ..     135     179 .. 0.88
   3 ?    3.1   0.1     0.091   1.8e+02       6      39 ..     210     243 ..     205     248 .. 0.83
   4 ?   -4.1   0.7         7   1.4e+04      10      28 ..     419     422 ..     409     434 .. 0.43

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.003
   PF13428.1  8 arallalGdpdeAiallrralal 30
                ++a +a+++++eA+al+++al  
  MMETSP1325-20131115|3821_1 34 GNAAFAAEHFEEALALYDQALDE 56
                78999***************974 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 1.7e-05
   PF13428.1   2 eallalarallalGdpdeAiallrrala..laPddaea 37 
                 +a+++l +al+++G++ eAi ++++ala  +aP++a+ 
  MMETSP1325-20131115|3821_1 136 KAHYRLSQALEQQGRLHEAILAAQAALAcnDAPKSADT 173
                 699************************97678988875 PP

  == domain 3    score: 3.1 bits;  conditional E-value: 0.091
   PF13428.1   6 alarallalGdpdeAiallrralalaPddaeall 39 
                 +l+ ++++l + +eA a +++++  + ++  a  
  MMETSP1325-20131115|3821_1 210 LLVTLMERLAQKAEAQAIANAVANEGKENRPAVE 243
                 5788999**************9998888877765 PP

  == domain 4    score: -4.1 bits;  conditional E-value: 7
   PF13428.1  10 allalGdpdeAiallrral 28 
                 a               +a+
  MMETSP1325-20131115|3821_1 419 A---------------KAA 422
                 2...............222 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.4    0.0016       3.1       7      30 ..      35      59 ..      31      63 .. 0.69
   2 ?   -3.6   0.0       6.2   1.2e+04      19      29 ..      88      96 ..      87     101 .. 0.68
   3 ?    4.3   0.5     0.019        38       1      32 [.     137     168 ..     137     172 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0016
   PF13176.1  7 rlysrlgdyekAielyeraL.altk 30
                ++ ++   +e+A+ ly +aL +l++
  MMETSP1325-20131115|3821_1 35 NAAFAAEHFEEALALYDQALdELDD 59
                5555666788888888887766665 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 6.2
   PF13176.1 19 ielyeraLalt 29
                ++l+e+  +l+
  MMETSP1325-20131115|3821_1 88 LKLHEQ--VLK 96
                689999..443 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.019
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdp 32 
                 a+++L ++ +++g+  +Ai + ++aLa  ++p
  MMETSP1325-20131115|3821_1 137 AHYRLSQALEQQGRLHEAILAAQAALACNDAP 168
                 678999*************9999988776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1076  (0.078701); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.91u 0.37s 00:00:01.28 Elapsed: 00:00:00.86
# Mc/sec: 1457.32
//
Query:       MMETSP1325-20131115|3828_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 484.16
//
Query:       MMETSP1325-20131115|3826_1  [L=300]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-57  195.1   0.0    1.1e-57  194.9   0.0    1.0  1  PF00069.20 Protein kinase domain
    6.1e-29  100.8   0.0    7.6e-29  100.5   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.031   12.9   0.0      0.044   12.5   0.0    1.1  1  PF07387.6  Seadornavirus VP7
      0.063   12.6   0.0       0.12   11.6   0.0    1.4  1  PF04218.8  CENP-B N-terminal DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.9   0.0   3.4e-61   1.1e-57      44     259 ..       5     214 ..       1     215 [. 0.96

  Alignments for each domain:
  == domain 1    score: 194.9 bits;  conditional E-value: 3.4e-61
                 HHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--.....HHHHHTSGG CS
  PF00069.20  44 tavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRlt.....aeeilkhpw 259
                 + v+E  il+ lsHp+iv+l ++f++ ++ly+vleyv gg++f++l++ ++l+ +++k++a q+    eylHs+ +i+rDLKpeN+Lldk g++ki+DFG+ak   +   k++tl+gt+eY+APEvll +k+++k vD+W+lG+++ye+l g++pf ++   d + ++++il +k+++++  +    +++k+likkll  d +kR       a +i++h+w
  MMETSP1325-20131115|3826_1   5 HMVSEKTILAALSHPFIVTLAGTFQDARYLYMVLEYVVGGEFFTHLRNAQRLDNNNAKFYAAQVSLIFEYLHSQDFIYRDLKPENLLLDKMGYIKITDFGFAK---RVAFKTYTLCGTPEYIAPEVLL-NKGHGKGVDWWTLGILMYEMLVGQPPFVDD---DPMGIYQQILAGKVNFPRFID----RNAKSLIKKLLVADLTKRFGclkagASDIKNHKW 214
                 446799************************************************************************************************7...688999****************.******************************...*****************9988....89*****************988888889999988 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.5   0.0   2.2e-32   7.6e-29      45     249 ..       3     198 ..       1     201 [. 0.89

  Alignments for each domain:
  == domain 1    score: 100.5 bits;  conditional E-value: 2.2e-32
                 HHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS CS
  PF07714.12  45 keefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeR 249
                  e++++e  i+ +l+hp iv+l g + +++ l++v+eyv gG++ + Lr+   ++l+ ++   +a+q++   eyL+s++++ rdL   N Ll++   +ki+DfG a+++       k+ +     +++apE+l +k   +  D W  G+l++E++  g+ p+ + +++ +++++ +gk ++ p+ + ++ ++l+k+ + ++ ++R
  MMETSP1325-20131115|3826_1   3 VEHMVSEKTILAALSHPFIVTLAGTFQDARYLYMVLEYVVGGEFFTHLRNA--QRLDNNNAKFYAAQVSLIFEYLHSQDFIYRDLKPENLLLDKMGYIKITDFGFAKRV-----AFKTYTLCGTPEYIAPEVLLNKGHGKGVDWWTLGILMYEMLV-GQPPFVDDDPMGIYQQILAGK-VNFPRFIDRNAKSLIKKLLVADLTKR 198
                 57899********************************************98..9*******************************************************.....333334455679****************************99.99*************998775.56677777777777776666665555 PP

>> PF07387.6  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.3e-05     0.044     157     187 ..      75     103 ..      56     113 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.3e-05
   PF07387.6 157 fhsestnllhGDcnpenlmcDknGylklvDP 187
                 +h  s+  ++ D +penl+ Dk+Gy+k+ D 
  MMETSP1325-20131115|3826_1  75 LH--SQDFIYRDLKPENLLLDKMGYIKITDF 103
                 44..78899*******************995 PP

>> PF04218.8  CENP-B N-terminal DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.7e-05      0.12      25      46 ..     192     213 ..     188     214 .. 0.95

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 3.7e-05
   PF04218.8  25 kaelarrfnvpestlsdilknK 46 
                 +a+l +rf++++  +sdi+++K
  MMETSP1325-20131115|3826_1 192 VADLTKRFGCLKAGASDIKNHK 213
                 589******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1497.72
//
Query:       MMETSP1325-20131115|3830_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-05   22.2   0.2    0.00024   20.5   0.1    1.8  2  PF13833.1  EF-hand domain pair
     0.0008   19.3   0.1     0.0012   18.8   0.1    1.3  1  PF13499.1  EF-hand domain pair
     0.0033   16.4   2.9      0.049   12.8   0.6    2.7  3  PF00036.27 EF hand
  ------ inclusion threshold ------
      0.015   14.4   1.6      0.037   13.2   0.8    1.9  2  PF13202.1  EF hand
      0.027   14.2   3.9       0.17   11.7   2.3    2.4  2  PF13405.1  EF-hand domain


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   8.8e-08   0.00024       8      53 ..       5      53 ..       1      54 [. 0.85
   2 ?   -0.5   0.0      0.32   8.8e+02       4      16 ..      74      86 ..      72      88 .] 0.75

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 8.8e-08
   PF13833.1  8 eeLkralallglkg....lseeevdilfrefDtdgdGkisfeEFcvller 53
                 e+k++++  gl      ls+++v+ l++++D dg G ++++E  +++er
  MMETSP1325-20131115|3830_1  5 GEFKKMIRI-GLRIpptvLSDKDVELLINAIDDDGGGELDLDELADFVER 53
                588887755.44448899**************************999987 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.32
   PF13833.1  4 lItreeLkralal 16
                ++  e Lk a+a+
  MMETSP1325-20131115|3830_1 74 KVESEGLKAAMAK 86
                567799***9954 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   4.3e-07    0.0012      17      65 ..       2      50 ..       1      51 [. 0.83

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 4.3e-07
   PF13499.1 17 ldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65
                ld+ e++++++  +       +++ ++ +++ +D +g G l+++E++ +
  MMETSP1325-20131115|3830_1  2 LDYGEFKKMIRIGLRIPPTVLSDKDVELLINAIDDDGGGELDLDELADF 50
                8999*****99877666666666666666****************9976 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.025        69      17      27 ..       2      12 ..       1      13 [. 0.85
   2 !   12.8   0.6   1.8e-05     0.049       3      27 ..      28      52 ..      26      54 .. 0.87
   3 ?   -2.5   0.0       1.4   3.9e+03      22      28 ..      80      86 ..      74      87 .. 0.65

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.025
                BEHHHHHHHHH CS
  PF00036.27 17 IsfeEfkealk 27
                +++ Efk++++
  MMETSP1325-20131115|3830_1  2 LDYGEFKKMIR 12
                7999***9985 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 1.8e-05
                HHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkealk 27
                + +++ +D Dg G ++++E+ ++++
  MMETSP1325-20131115|3830_1 28 ELLINAIDDDGGGELDLDELADFVE 52
                567899**************99976 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 1.4
                HHHHHHH CS
  PF00036.27 22 fkealkk 28
                +k+a++k
  MMETSP1325-20131115|3830_1 80 LKAAMAK 86
                7778876 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.85   2.3e+03      17      24 ..       3      10 ..       2      11 .. 0.70
   2 ?   13.2   0.8   1.4e-05     0.037       6      25 .]      32      51 ..      27      51 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.85
                -HHHHHHH CS
   PF13202.1 17 sreELkrl 24
                +  E+k++
  MMETSP1325-20131115|3830_1  3 DYGEFKKM 10
                56699986 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 1.4e-05
                HHH--S----B-HHHHHHHH CS
   PF13202.1  6 rafDlNgDGkIsreELkrlv 25
                +a+D +g G ++ +EL  +v
  MMETSP1325-20131115|3830_1 32 NAIDDDGGGELDLDELADFV 51
                89**************8775 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.28   7.8e+02      17      27 ..       2      12 ..       1      14 [. 0.85
   2 ?   11.7   2.3   6.2e-05      0.17       7      28 ..      32      53 ..      30      85 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.28
                B---HHHHHHH CS
   PF13405.1 17 idaeELrdaLr 27
                +d  E+++++r
  MMETSP1325-20131115|3830_1  2 LDYGEFKKMIR 12
                7899***9998 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 6.2e-05
                GCC-------B---HHHHHHH. CS
   PF13405.1  7 klfDkdgdGkidaeELrdaLrk 28
                +++D+dg G++d++EL d+  +
  MMETSP1325-20131115|3830_1 32 NAIDDDGGGELDLDELADFVER 53
                679**************98764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|3831_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.60
# Mc/sec: 231.65
//
Query:       MMETSP1325-20131115|3832_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.5   0.5      0.077   13.0   0.3    1.2  1  PF06260.7 Protein of unknown function (DUF1024)
       0.92    9.5   4.5       0.48   10.4   1.0    1.8  2  PF09228.5 Prokaryotic Transcriptional repressor TraM


Domain annotation for each model (and alignments):
>> PF06260.7  Protein of unknown function (DUF1024)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   1.1e-05     0.077       5      74 ..      17      90 ..      14      95 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.1e-05
   PF06260.7  5 eqieqsvisasaynGndteG..l.lkeiedvy.kkaqafdeilegltnalqealkedieldeavgilveqvvye 74
                e  e s+++a a   +dt+   l +  i d   ++a + de+ eg + a  e ++e+ e   a g++++++  +
  MMETSP1325-20131115|3832_1 17 EDDEASILTAIAAASDDTDEedLeISAIKDTSrRRALSADEVGEGADXARIEDVREKKEYAFAAGLVQHRRLVH 90
                56688999998888888855114345677765267999***************************999887765 PP

>> PF09228.5  Prokaryotic Transcriptional repressor TraM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.0     7e-05      0.48       5      49 ..      12      58 ..       9      77 .. 0.85
   2 ?    0.0   0.1      0.12   8.4e+02      37      46 ..      82      91 ..      64      95 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 7e-05
                ESS---.-SSGGG--TTTTS-HHHHHHHHHHHHHH..HHHHHHHHHH CS
   PF09228.5  5 essetdadelkplesllsslskseleaLaisAIre..hRrllaaaea 49
                 s++t++de++ l ++    ++++ e L isAI++   Rr+l a+e 
  MMETSP1325-20131115|3832_1 12 ASDVTEDDEASILTAIAAASDDTDEEDLEISAIKDtsRRRALSADEV 58
                56788899*************************97336899998884 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 0.12
                HHHHHHHHHH CS
   PF09228.5 37 IrehRrllaa 46
                  +hRrl+++
  MMETSP1325-20131115|3832_1 82 LVQHRRLVHH 91
                5789999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|3829_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.2    9.0   4.4        2.7    7.8   3.1    1.6  1  PF07125.6 Protein of unknown function (DUF1378)


Domain annotation for each model (and alignments):
>> PF07125.6  Protein of unknown function (DUF1378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   3.1    0.0002       2.7       9      25 ..      80      96 ..      77     104 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0002
   PF07125.6  9 LYFCtvvcvLYLvsGGY 25
                +Y Ct vc +Y+  GG+
  MMETSP1325-20131115|3829_1 80 VYVCTYVCKMYVWTGGW 96
                7***************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 517.61
//
Query:       MMETSP1325-20131115|3834_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-26   92.9   1.1    1.1e-26   92.8   0.8    1.0  1  PF00311.12 Phosphoenolpyruvate carboxylase


Domain annotation for each model (and alignments):
>> PF00311.12  Phosphoenolpyruvate carboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   0.8   8.4e-31   1.1e-26       5      92 ..       2      89 ..       1      90 [] 0.98

  Alignments for each domain:
  == domain 1    score: 92.8 bits;  conditional E-value: 8.4e-31
  PF00311.12  5 elVlTAHPteivRrtilkkqrriaelleqldekelteeereeleeqleeeiallwrtdelrqkkptvldEvknglsyfeevlfealPe 92
                ++VlTAHPte+ Rrt++ k+r+i e+l++ld++ +te+er+++++++e+++++lw tde+r++kpt++ E+++g++++e++l++++P+
  MMETSP1325-20131115|3834_1  2 DIVLTAHPTEVNRRTLIAKHRKIDEMLNELDREGATESERASFKAEIERQVETLWWTDEIRRTKPTPIVEARQGIKIIESSLWDTVPS 89
                58*************************************************************************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 458.88
//
Query:       MMETSP1325-20131115|3837_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.011   15.5   0.6      0.011   15.5   0.4    1.1  1  PF09273.6  Rubisco LSMT substrate-binding
      0.032   13.8   0.4      0.034   13.7   0.3    1.1  1  PF07763.8  FEZ-like protein
      0.053   12.8   0.1      0.053   12.8   0.1    1.0  1  PF02053.10 Gene 66 (IR5) protein


Domain annotation for each model (and alignments):
>> PF09273.6  Rubisco LSMT substrate-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.4   2.4e-06     0.011      72     112 ..      10      51 ..       2      64 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2.4e-06
                 -HHHHHHHHHHHHHHHHHHH----S-HHH.HHHH.H-----H CS
   PF09273.6  72 skenEekvlqvladlcaeaLseypttlee.Deallkkadlee 112
                  ++ Eek++++ ++++ e ++++ ++l e +e+ll+ ++ + 
  MMETSP1325-20131115|3837_1  10 MQAYEEKCRRLYQTRLTEYIERTDSELAEyEEMLLQAGSKAA 51 
                 4678*******************************9988765 PP

>> PF07763.8  FEZ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   7.4e-06     0.034     157     197 ..       6      46 ..       2      60 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 7.4e-06
   PF07763.8 157 ksssnslyeeklrelsvseLnelleevEvlireysEeLvqe 197
                 + ++ + yeek r+l  ++L+e +e+ +  + ey E L+q 
  MMETSP1325-20131115|3837_1   6 QVATMQAYEEKCRRLYQTRLTEYIERTDSELAEYEEMLLQA 46 
                 5567789*******************************985 PP

>> PF02053.10  Gene 66 (IR5) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   1.2e-05     0.053     140     183 ..       8      52 ..       4      65 .] 0.77

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.2e-05
  PF02053.10 140 svsqlYEkallrlleealg.igetPladaerywkalleavaaege 183
                 ++ q+YE++++rl++++l    e   +++++y + ll+a  ++  
  MMETSP1325-20131115|3837_1   8 ATMQAYEEKCRRLYQTRLTeYIERTDSELAEYEEMLLQAGSKAAV 52 
                 56899**********99863678899999*****99998777663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       505  (0.0369368); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 283.21
//
Query:       MMETSP1325-20131115|3838_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.79
# Mc/sec: 212.34
//
Query:       MMETSP1325-20131115|3839_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.34s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1102.32
//
Query:       MMETSP1325-20131115|3833_1  [L=481]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0022   17.5   1.8     0.0022   17.5   1.2    2.4  2  PF00130.17 Phorbol esters/diacylglycerol binding domain (C1 domain)
  ------ inclusion threshold ------
        2.3    8.9   8.5          2    9.1   0.1    3.9  5  PF13428.1  Tetratricopeptide repeat
        5.6    6.6   8.6         18    4.9   0.4    3.0  2  PF02150.11 RNA polymerases M/15 Kd subunit
        7.8    6.3   9.9         26    4.6   4.9    3.0  2  PF00301.15 Rubredoxin
         10    6.0  13.1      0.092   12.5   1.0    3.3  3  PF00643.19 B-box zinc finger


Domain annotation for each model (and alignments):
>> PF00130.17  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.7     0.069   1.9e+02      13      36 ..      13      28 ..       1      33 [. 0.73
   2 !   17.5   1.2   8.2e-07    0.0022       1      46 [.     343     387 ..     343     391 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.069
                B-TTT-SB---------EETTT-- CS
  PF00130.17 13 fCkhCgkflwgkgkqglkCswCql 36
                +C++C ++l        +Cs C++
  MMETSP1325-20131115|3833_1 13 SCAVCMEPL--------SCSSCGY 28
                688888888........7777766 PP

  == domain 2    score: 17.5 bits;  conditional E-value: 8.2e-07
                 --EE----SS--B-TTT-SB---------EETTT--B--STT---- CS
  PF00130.17   1 HhwvhrnfkqptfCkhCgkflwgkgkqglkCswCqllvHkkCfekv 46 
                 H  +h+++++  +C++Cg++l  +g+++  C+ C+++v  +C +k+
  MMETSP1325-20131115|3833_1 343 HGLSHGSANDGWSCDVCGNLL-DEGMPASFCDVCEYVVCPRCKRKH 387
                 6778888899999********.********************9876 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1       0.1   2.8e+02      12      43 ..     106     137 ..      93     138 .. 0.85
   2 ?   -0.8   0.0       1.2   3.2e+03      22      42 ..     173     193 ..     166     195 .. 0.82
   3 ?    9.1   0.1   0.00072         2      21      44 .]     252     275 ..     246     275 .. 0.85
   4 ?   -2.9   0.0         5   1.4e+04       9      26 ..     282     299 ..     279     304 .. 0.75
   5 ?   -3.7   0.0         5   1.4e+04      26      30 ..     320     324 ..     306     330 .. 0.51

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.1
   PF13428.1  12 lalGdpdeAiallrralalaPddaealllLar 43 
                  ++G+  +A+  +  +l++ P++  al  La+
  MMETSP1325-20131115|3833_1 106 YRQGEDRGAEGEATGLLKRKPSSMSALCDLAQ 137
                 4899********************99999987 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 1.2
   PF13428.1  22 allrralalaPddaealllLa 42 
                 + l+ra  + P++a   ++La
  MMETSP1325-20131115|3833_1 173 ESLERASTKEPHSALTTYRLA 193
                 679999999999999888887 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.00072
   PF13428.1  21 iallrralalaPddaealllLarl 44 
                 +a lr+++a++P+d +a ++L++l
  MMETSP1325-20131115|3833_1 252 EARLRAVIAADPSDVDANYMLGAL 275
                 456******************986 PP

  == domain 4    score: -2.9 bits;  conditional E-value: 5
   PF13428.1   9 rallalGdpdeAiallrr 26 
                 r+ ++ G p e +al+++
  MMETSP1325-20131115|3833_1 282 RLERRGGSPSEVAALYDE 299
                 566777888888888876 PP

  == domain 5    score: -3.7 bits;  conditional E-value: 5
   PF13428.1  26 ralal 30 
                  a a+
  MMETSP1325-20131115|3833_1 320 SARAK 324
                 33222 PP

>> PF02150.11  RNA polymerases M/15 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   1.3      0.01        28      23      32 ..      23      32 ..      14      34 .. 0.87
   2 ?    4.9   0.4    0.0067        18       4      29 ..     356     378 ..     356     379 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.01
                ESSSS-EEE- CS
  PF02150.11 23 CrqCgYeepa 32
                C++CgYe ++
  MMETSP1325-20131115|3833_1 23 CSSCGYEGEK 32
                *******886 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0067
                 -TTTSSBEEEEEETTTTEEESSSS-E CS
  PF02150.11   4 CpkCnNlLlpkedkegrnaCrqCgYe 29 
                 C  C+NlL  +e+   +  C+ C Y+
  MMETSP1325-20131115|3833_1 356 CDVCGNLL--DEGMPASF-CDVCEYV 378
                 889***99..45555554.9999996 PP

>> PF00301.15  Rubredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.21   5.8e+02       3      10 ..      22      29 ..      21      40 .. 0.82
   2 ?    4.6   4.9    0.0097        26       2      41 ..     354     384 ..     353     388 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.21
                EEST---E CS
  PF00301.15  3 eCkvCgyv 10
                 C+ Cgy+
  MMETSP1325-20131115|3833_1 22 SCSSCGYE 29
                6999**97 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0097
                 EEEST---EEETTGGTTT--------GGGS-TT-B-ST-- CS
  PF00301.15   2 yeCkvCgyvydpaegdpdegippgTpFedlpddWvCPvCg 41 
                 + C+vCg   d+  +          +F d+ +  vCP+C+
  MMETSP1325-20131115|3833_1 354 WSCDVCGNLLDEGMPA---------SFCDVCEYVVCPRCK 384
                 89**********9974.........7*************8 PP

>> PF00643.19  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.9      0.68   1.9e+03      18      29 ..      14      26 ..      12      30 .. 0.54
   2 ?   -0.8   0.0      0.48   1.3e+03      28      39 ..     132     147 ..     131     149 .. 0.82
   3 ?   12.5   1.0   3.4e-05     0.092       4      34 ..     354     387 ..     351     394 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.68
  PF00643.19 18 CedCqq.llCedC 29
                C  C + l C +C
  MMETSP1325-20131115|3833_1 14 CAVCMEpLSCSSC 26
                5555553445555 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.48
  PF00643.19  28 dClleeHkg....Htv 39 
                  C l++H++    H+v
  MMETSP1325-20131115|3833_1 132 LCDLAQHSSendkHEV 147
                 5999***778899987 PP

  == domain 3    score: 12.5 bits;  conditional E-value: 3.4e-05
  PF00643.19   4 rkCpeHe....ekelqlfCedCqqllCedClleeH 34 
                 + C+ ++    e     fC  C+  +C+ C  + H
  MMETSP1325-20131115|3833_1 354 WSCDVCGnlldEGMPASFCDVCEYVVCPRCKRK-H 387
                 66777776665333679*************998.8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.81u 0.35s 00:00:01.16 Elapsed: 00:00:00.55
# Mc/sec: 2095.72
//
Query:       MMETSP1325-20131115|3841_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.67
# Mc/sec: 536.50
//
Query:       MMETSP1325-20131115|3843_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-08   33.3   0.0    4.8e-08   33.2   0.0    1.0  1  PF00856.23 SET domain


Domain annotation for each model (and alignments):
>> PF00856.23  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   3.5e-12   4.8e-08     106     163 ..      19      72 ..       5      73 .. 0.93

  Alignments for each domain:
  == domain 1    score: 33.2 bits;  conditional E-value: 3.5e-12
                 TCCEECCEECEE-TCGGGTEE-SS.SEEEEEEESTTSSEEEEEESS-B-TT-B-EE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00856.23 106 eeseyvidakllgpvarflNHSCdpNltvqfvfvtrgprvalrAtrdIpkGeEltidY 163
                   s++++++++ + va+f+NH  ++N++ +fv    ++ + +rA  d p+++E+t  Y
  MMETSP1325-20131115|3843_1  19 ASSRDEPSGTGVWVVASFMNHELPHNTHREFV----NDMIFVRAAADLPADTEITTFY 72 
                 6788999****************99*******....9******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 361.63
//
Query:       MMETSP1325-20131115|3844_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 350.24
//
Query:       MMETSP1325-20131115|3846_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-12   46.4   2.9    1.1e-07   31.9   0.6    2.4  2  PF01814.18 Hemerythrin HHE cation binding domain


Domain annotation for each model (and alignments):
>> PF01814.18  Hemerythrin HHE cation binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.6   8.2e-12   1.1e-07      11      99 ..      25     115 ..      13     130 .. 0.76
   2 !   14.1   0.0   2.6e-06     0.035      30      75 ..     147     194 ..     133     200 .. 0.77

  Alignments for each domain:
  == domain 1    score: 31.9 bits;  conditional E-value: 8.2e-12
                 HHHH---HHHHHS--HH.............HHHHHHHHHHHHHHHHHHHH-TTHH............HHHHHHHHHHHH-----SS--HHH..... CS
  PF01814.18  11 relrellarlreaaeal..arpedlrklaelldelveelerHhakEEellfPalerddpagrevl.drlekeHdeirelleelkealrdla....a 99 
                 + l + +ar++e++ a+   ++ +l++l+++++ +  ++e Hh+ EE+++fPa++      +  l d+++ +H++i++++  ++ ++++l+     
  MMETSP1325-20131115|3846_1  25 KDLMQSVARMAETVLAGepIEDFELDALKTHWRICFGFIEEHHHNEEAHIFPAIQ-----TKVSLpDKMSDDHEVIEKQVLHIDSLINALPesdiI 115
                 555555556666666667534445*******************************.....666666**********************99955541 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 2.6e-06
                 .........HHHHHHHHHHHHHHHHHHHH-TTHH.............H CS
  PF01814.18  30 pedlrklaelldelveelerHhakEEellfPale..rddpagrevldr 75 
                  + l+kl+e++  l++ +++H+++EE+   Pa+   +  +++++v+d+
  MMETSP1325-20131115|3846_1 147 ADTLAKLHEAIGTLQQSMDPHLKEEEAFALPAMHsnFTPAELKPVFDK 194
                 45689***************************9976444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.52s 00:00:01.02 Elapsed: 00:00:00.55
# Mc/sec: 1424.74
//
Query:       MMETSP1325-20131115|3848_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-19   68.8   0.0    5.2e-19   68.5   0.0    1.1  1  PF02146.12 Sir2 family


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   0.0   3.8e-23   5.2e-19      99     181 .]       3     115 ..       1     115 [. 0.98

  Alignments for each domain:
  == domain 1    score: 68.5 bits;  conditional E-value: 3.8e-23
                 EEE----TTEEEETTTS-EEEECCGGTCCCHH--..............................B-ST---BEEESS--B-----.HHHHHHHHHHHH-SEEEE----S-STT CS
  PF02146.12  99 vvelHGslakakcvkCeakesgeelkeeieaekve.............................ecekcgkllkpdvvfFGealp.eklkkllekveeadlllviGtSlkVap 181
                 v++lHG + ++ c++C+ ++s+++l+ ++++++                               +c +cg+ lkpdvvfFG+++p ++++ ++++ve+ad +lviG+ l+V++
  MMETSP1325-20131115|3848_1   3 VTDLHGRIDRVICMNCRSTTSRSSLQGRLKSANDGfiervlqgggkqrpdgdyqfdgdyqfnvcTCLECGGTLKPDVVFFGDNVPkDRVDLCYADVESADAVLVIGSTLEVYS 115
                 899*****************************999**************************************************9*************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.45s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 805.58
//
Query:       MMETSP1325-20131115|3849_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.43s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 216.14
//
Query:       MMETSP1325-20131115|3850_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-85  285.7   0.0    4.6e-85  285.5   0.0    1.0  1  PF01795.14 MraW methylase family
    5.8e-08   32.6   0.5    6.2e-07   29.3   0.0    2.4  2  PF13659.1  Methyltransferase domain
    0.00015   22.2   0.0      0.011   16.1   0.0    2.3  2  PF12847.2  Methyltransferase domain
     0.0012   18.3   0.0       0.73    9.2   0.0    2.2  2  PF13847.1  Methyltransferase domain
     0.0026   16.9   0.0     0.0045   16.1   0.0    1.3  1  PF04672.7  S-adenosyl methyltransferase
     0.0075   16.6   0.0       0.15   12.4   0.0    2.6  2  PF08241.7  Methyltransferase domain
  ------ inclusion threshold ------
      0.036   14.3   0.0      0.095   12.9   0.0    1.6  1  PF13649.1  Methyltransferase domain
      0.074   12.1   0.0       0.11   11.6   0.0    1.1  1  PF04898.9  Glutamate synthase central domain


Domain annotation for each model (and alignments):
>> PF01795.14  MraW methylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  285.5   0.0   2.7e-88   4.6e-85       3     309 ..      16     330 ..      14     331 .. 0.92

  Alignments for each domain:
  == domain 1    score: 285.5 bits;  conditional E-value: 2.7e-88
  PF01795.14   3 kHvsVLlkevvellevkedgvyiDaTlGaggHsealLeklse.lrligidrDkealeaakerlkkf..kkrvtliksnfaklkellkesk.......avekvdgillDLGvSslqldeaerGFsfkedapLDMRmdqsa....eltAaevlnklseeelakilkeygeekfakriAkaivearkkkpiettkelaevikkvvpakekrkkihpatrvFQAlRIavNdEleelkelleaalelLapgGrlavisFhSledrivknffkelskkaevPaglpvkeeelekraklitkkpilpseeeieeNprsrsakLrviek 309
                  H++V+++ev+++l + + gvyiD+TlG ggHs+a+L++l+e + ++++drD+eal+ a +rl+k   ++r++ ++++f++l+++lk+ +           v gillDLGvSs+qlde++rGFsfk dapLDMRm+  +    ++tAa+++n++ e e+a++l eygee  a+ iA+++v+ar   p+ tt el++v+ + + a   ++k++ +trvFQ lRIavNdE+ +l+++l +a + ++pgGr++v+s+hSledr vk+++++ + + +v + +    +++++  k + k p  ps++e+e Npr+rsa Lr++e+
  MMETSP1325-20131115|3850_1  16 YHTPVMANEVCDALISDPTGVYIDGTLGGGGHSTAMLDRLEEaGMVLAVDRDPEALASASNRLSKPldEGRFRTVEADFRTLESVLKRPEvtsllppDGLGVHGILLDLGVSSHQLDERKRGFSFKADAPLDMRMEGASagegSITAATIINEWAEDEIARVLWEYGEEPKARGIARRLVAAR---PVLTTGELVDVVGASIGAGPPKHKRKALTRVFQGLRIAVNDEVGALETVLASAEKFIRPGGRIVVLSYHSLEDRRVKRVLRSGALHGRVGRDFY--GNSVSP-WKPLRKVPKKPSKAEVELNPRARSAVLRAAER 330
                 6*****************************************9********************987889******************9865667776334799********************************9654222267************************************99...*************999998888899***********************************************************9988877776..333333.57788999999******************997 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   3.6e-10   6.2e-07       3     114 ..      36     264 ..      34     267 .. 0.87
   2 ?   -3.6   0.0       5.9     1e+04      29      42 ..     314     327 ..     314     332 .. 0.65

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 3.6e-10
   PF13659.1   3 rvldpgcGsGtfllaalell..aalllgvEldpraaalaarnlaraglaervrvrqgdlrdl.....................................................................................................aellragsfdlvvtnpPygpragaraalrd..............lydafleaaarllkpgGvlvli 114
                 +++d + G G   +a+l++l  a  +l+v+ dp+a+a a+ +l++   ++r+r +++d+r+l                                                                                                     + l++++ +d+v ++   gp ++ r+al++               ++ +l+ a+++ +pgG++v++
  MMETSP1325-20131115|3850_1  36 VYIDGTLGGGGHSTAMLDRLeeAGMVLAVDRDPEALASASNRLSKPLDEGRFRTVEADFRTLesvlkrpevtsllppdglgvhgilldlgvsshqlderkrgfsfkadapldmrmegasagegsitaatiinewaedeiarvlweygeepkargiarrlvaarPVLTTGELVDVVGASIGAGPPKHKRKALTRvfqglriavndevgALETVLASAEKFIRPGGRIVVL 264
                 689999*************999***********************9999*************999999999999999999999999999999999999999999999999999999999999999999999999999999999999988888888888888753245556788888888888888888888889999999999999988999************99987 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 5.9
   PF13659.1  29 vEldpraaalaarn 42 
                 vEl+pra  +  r+
  MMETSP1325-20131115|3850_1 314 VELNPRARSAVLRA 327
                 78999986555444 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   6.6e-06     0.011      11      70 ..      44     103 ..      42     144 .. 0.77
   2 ?    3.7   0.0     0.046        79      91     109 ..     245     263 ..     211     266 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 6.6e-06
   PF12847.2  11 GtGslslelarlrpgakvvgvDpseeslelarenaksldleeriellqgdakeelsller 70 
                 G G +++ l rl+  + v++vD+++e+l+ a +++++   e r++ +++d+   +s+l r
  MMETSP1325-20131115|3850_1  44 GGGHSTAMLDRLEEAGMVLAVDRDPEALASASNRLSKPLDEGRFRTVEADFRTLESVLKR 103
                 67889999999999999******************8877779999999999666666666 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.046
   PF12847.2  91 rrvlealpkllkpggrlvi 109
                 + vl+++ k ++pggr+v+
  MMETSP1325-20131115|3850_1 245 ETVLASAEKFIRPGGRIVV 263
                 567999***********98 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00043      0.73      13      54 ..      44      83 ..      32     103 .. 0.75
   2 !    6.9   0.0    0.0023       3.9      85     115 ..     240     270 ..     222     300 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00043
   PF13847.1 13 GtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfe 54
                G G+ + +l  +l + + v  +D+++ea+++A +r++ + ++
  MMETSP1325-20131115|3850_1 44 GGGHSTAMLD-RLEEAGMVLAVDRDPEALASASNRLS-KPLD 83
                5566666666.9999999***************9755.5555 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0023
   PF13847.1  85 aladpqkvlkeiervlkpggrlivespslla 115
                  + +++ vl ++e++++pggr++v s + l+
  MMETSP1325-20131115|3850_1 240 EVGALETVLASAEKFIRPGGRIVVLSYHSLE 270
                 57788999****************9998333 PP

>> PF04672.7  S-adenosyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.6e-06    0.0045      98     147 ..      60     110 ..      50     114 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.6e-06
   PF04672.7  98 RvvYvDnDPivlaharall.estpeGatdyieaDlrdpeeilespearevl 147
                  v  vD DP +la a   l +  +eG+ + +eaD+r+ e++l+ pe+ ++l
  MMETSP1325-20131115|3850_1  60 MVLAVDRDPEALASASNRLsKPLDEGRFRTVEADFRTLESVLKRPEVTSLL 110
                 57789*******988765516689**********************99877 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   8.8e-05      0.15       6      54 ..      44      97 ..      39     101 .. 0.78
   2 ?    0.7   0.0      0.39   6.6e+02      76      95 .]     244     263 ..     236     263 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.8e-05
   PF08241.7  6 Gtglllealaer.paarvtgvDlseemlatakerlkeegle....lvvadaeel 54
                G+g  +++l +  +a+ v++vD ++e+la a +rl++   e    +v+ad+++l
  MMETSP1325-20131115|3850_1 44 GGGHSTAMLDRLeEAGMVLAVDRDPEALASASNRLSKPLDEgrfrTVEADFRTL 97
                566666666666***********************9985557777777776665 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.39
   PF08241.7  76 pekalkeiaRvLkpgGllvi 95 
                 +e +l+ +++ ++pgG++v+
  MMETSP1325-20131115|3850_1 244 LETVLASAEKFIRPGGRIVV 263
                 6789999*********9985 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   5.5e-05     0.095       7      63 ..      44      99 ..      42     110 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.5e-05
   PF13649.1  7 GsGrviraltraldkgpeqrvigvDiseealelakerlss...kglkvkfvqadaralpf 63
                G+G ++++l  +l++  +  v++vD ++eal+ a +rls+   +g +++ v ad+r l+ 
  MMETSP1325-20131115|3850_1 44 GGGHSTAMLD-RLEE--AGMVLAVDRDPEALASASNRLSKpldEG-RFRTVEADFRTLES 99
                7788888886.5533..368******************7655333.999******99975 PP

>> PF04898.9  Glutamate synthase central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   6.2e-05      0.11      94     184 ..     191     284 ..     183     292 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 6.2e-05
                 G-EEEESSSB--HHHHHHHH-.......----EEEEESEEE-..----SHHHHHHHHHHHHHHHHH----EEEEESS--STTEEE--HHHH---HH CS
   PF04898.9  94 akrlklesPilseeeleklkelee....eelkakeidilfeke.egkeglekaleelceeaeeavkeGakiivLsdrkvseervaipallavgavh 184
                 a+rl   +P+l++ el  +   +      + k+k +  +f+    ++++   ale++ ++ae+ ++ G +i+vLs ++++++rv  + +l  ga+h
  MMETSP1325-20131115|3850_1 191 ARRLVAARPVLTTGELVDVVGASIgagpPKHKRKALTRVFQGLrIAVNDEVGALETVLASAEKFIRPGGRIVVLSYHSLEDRRV--KRVLRSGALH 284
                 67888999*******9998776556788777777777777754156788999************************99999886..4566666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.58u 0.45s 00:00:01.03 Elapsed: 00:00:00.50
# Mc/sec: 1619.94
//
Query:       MMETSP1325-20131115|3851_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 563.59
//
Query:       MMETSP1325-20131115|3854_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-18   64.3   0.0    8.8e-18   63.9   0.0    1.1  1  PF03129.15 Anticodon binding domain


Domain annotation for each model (and alignments):
>> PF03129.15  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.0   6.4e-22   8.8e-18       1      92 [.      37     125 ..      35     127 .. 0.95

  Alignments for each domain:
  == domain 1    score: 63.9 bits;  conditional E-value: 6.4e-22
                 SEEEEESSSSHHHHHHHHHHHHHHHHC----EEE--SSS----HHHHHHH----EEEEE-HHHHCTTEEEEEETTTTBEEEEETTTHHHHHH CS
  PF03129.15   1 qvvviplgekaeeledyakklaeeLreagirvelddrsesigkklrradllgipfavvvGekelekgtvtvrdrdtgeqervsleelveklk 92 
                 q  ++p+++   e++  ++++a++ r+ g+rve+d  +e++ k++r+a+++ ip++ vvGe e++++t++vr+r+ g+  +++++++++ l+
  MMETSP1325-20131115|3854_1  37 QMRLLPVTD---EAQVWCQDVAKRARRMGLRVEVDRGNERLAKQIRNAEQARIPIMAVVGEAEMAANTLAVRSRKAGDLGSLPVDNVLTLLE 125
                 567899999...9***************************************************99*********************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|3853_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.23   11.3   5.5       0.55   10.1   3.9    1.3  1  PF09304.5 Cortexillin I, coiled coil


Domain annotation for each model (and alignments):
>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.9   4.1e-05      0.55       9      84 ..      15      66 ..       7      78 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 4.1e-05
   PF09304.5  9 asknelankLagLersledekvsqe.eL....akqkdeLksllasleaqkaerekrlrelqakidellknlekeklakleL 84
                as + ++ kL + +r+ledek+s +  L     + +d+ ++l a+l+a                             + +L
  MMETSP1325-20131115|3853_1 15 ASATAMRAKLEARNRKLEDEKLSLNgTLfecrLRMQDQAEQLEAALQA-----------------------------RADL 66
                555666666666666666666664313455555555555555555554.............................4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       640  (0.046811); expected 273.4 (0.02)
Passed bias filter:                      482  (0.0352545); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 380.11
//
Query:       MMETSP1325-20131115|3855_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|3857_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   12.2   1.5        0.2   11.9   1.0    1.2  1  PF02672.10 CP12 domain
       0.24   10.6   1.6        8.8    5.6   0.0    2.7  3  PF03790.8  KNOX1 domain


Domain annotation for each model (and alignments):
>> PF02672.10  CP12 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.0     3e-05       0.2      15      44 ..       7      36 ..       5      47 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3e-05
  PF02672.10 15 acaeegansaecaaawdeveeLqaeashqr 44
                ac+   a +ae  aa de+e Lqa++++ +
  MMETSP1325-20131115|3857_1  7 ACELLKAAKAELQAAKDELELLQAAKAEME 36
                6776678899****************9866 PP

>> PF03790.8  KNOX1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0013       8.8      29      44 ..       4      19 ..       1      20 [. 0.90
   2 ?    0.2   0.0     0.064   4.4e+02      30      44 ..      22      36 ..      18      37 .. 0.73
   3 ?    3.2   0.0    0.0074        50       2      10 ..      43      51 ..      42      52 .. 0.92

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0013
   PF03790.8 29 PpevaarLeeirrese 44
                Pp++ ++L+++ +e +
  MMETSP1325-20131115|3857_1  4 PPDACELLKAAKAELQ 19
                9***********9987 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.064
   PF03790.8 30 pevaarLeeirrese 44
                 + +++L+++ +e e
  MMETSP1325-20131115|3857_1 22 KDELELLQAAKAEME 36
                566788888888766 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.0074
   PF03790.8  2 aiKAkIasH 10
                a+K+ ++sH
  MMETSP1325-20131115|3857_1 43 AMKSTVMSH 51
                79******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       674  (0.0492978); expected 273.4 (0.02)
Passed bias filter:                      516  (0.0377414); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 264.60
//
Query:       MMETSP1325-20131115|3856_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-05   23.7   0.0     0.0026   18.1   0.0    2.3  2  PF13637.1 Ankyrin repeats (many copies)
     0.0056   16.8   0.0      0.022   14.9   0.0    1.9  1  PF12796.2 Ankyrin repeats (3 copies)


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.018   1.2e+02      13      36 ..      35      60 ..      22      65 .. 0.83
   2 !   18.1   0.0   3.8e-07    0.0026      15      46 ..      81     112 ..      79     116 .. 0.84

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.018
   PF13637.1 13 rlelvklLlekg..idinrtdesGnt 36
                ++++++lL+++g  ++++ +d  G++
  MMETSP1325-20131115|3856_1 35 WVPVAHLLVKRGaaWEPDVRDHAGRS 60
                599*******9988999999998875 PP

  == domain 2    score: 18.1 bits;  conditional E-value: 3.8e-07
   PF13637.1  15 elvklLlekgidinrtdesGntaLhiAalrgn 46 
                  lv++ le g d+n++d++G+taL ++ +r++
  MMETSP1325-20131115|3856_1  81 GLVRHALEAGLDPNAVDKNGETALSLVQSREH 112
                 689*********************87766555 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   3.2e-06     0.022      40      75 ..      81     116 ..       6     131 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.2e-06
   PF12796.2  40 eivklLleagadvnakdkegntpLhlAvrnghlelv 75 
                   v+  leag d+na dk+g+t+L l  + +h +++
  MMETSP1325-20131115|3856_1  81 GLVRHALEAGLDPNAVDKNGETALSLVQSREHGDVL 116
                 6789999******************99998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 968.53
//
Query:       MMETSP1325-20131115|3858_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-08   33.5   0.1    1.1e-07   31.3   0.0    1.9  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.06   8.2e+02      34      39 .]      10      15 ..       2      15 .. 0.86
   2 !   31.3   0.0   7.9e-12   1.1e-07       3      39 .]      23      60 ..      21      60 .. 0.97

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.06
                EEEEEE CS
  PF00400.27 34 tirlWd 39
                t+++Wd
  MMETSP1325-20131115|3858_1 10 TLKMWD 15
                899**8 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 7.9e-12
                EEEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  3 ckatlrgHtspVtcvafspd.gpllasgSrDgtirlWd 39
                ++atl+gH+ +  +++++p   +ll s+++D++  lWd
  MMETSP1325-20131115|3858_1 23 PLATLQGHEQGLLSISWCPQdTSLLMSCGKDNKTILWD 60
                799**********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.59
# Mc/sec: 324.93
//
Query:       MMETSP1325-20131115|3860_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 327.92
//
Query:       MMETSP1325-20131115|3862_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   13.0   0.1      0.097   12.1   0.0    1.4  2  PF07219.8 HemY protein N-terminus


Domain annotation for each model (and alignments):
>> PF07219.8  HemY protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.17   2.4e+03      89     105 ..       8      24 ..       5      27 .. 0.64
   2 ?   12.1   0.0   7.1e-06     0.097      60      97 ..      30      67 ..      25      70 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.17
   PF07219.8  89 edqpelalllaaraAqa 105
                 ed  el  +l+++aA+ 
  MMETSP1325-20131115|3862_1   8 EDDAELEGMLESEAAEL 24 
                 56666667777777765 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 7.1e-06
   PF07219.8 60 rkalseGllalaeGdwakAerlarkaaeledqpelall 97
                ++ l +++l++a Gd++kA  ++++ ++l+++pe++ l
  MMETSP1325-20131115|3862_1 30 QNDLWNAILKIAGGDGEKALEMIENPEALQEHPEIIKL 67
                5678899****************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|3866_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|3868_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-05   24.4   0.0    1.8e-05   23.9   0.0    1.2  1  PF03388.8  Legume-like lectin family
     0.0099   15.2   0.0      0.014   14.7   0.0    1.2  1  PF13440.1  Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.024   14.5   2.3       0.11   12.4   1.7    2.0  1  PF09304.5  Cortexillin I, coiled coil
      0.036   13.4   1.5      0.061   12.7   1.0    1.3  1  PF03194.10 LUC7 N_terminus
      0.069   12.8   0.0       0.12   12.1   0.0    1.3  1  PF07703.9  Alpha-2-macroglobulin family N-terminal region
      0.093   11.8   0.5       0.14   11.2   0.3    1.2  1  PF11945.3  WAHD domain of WASH complex
       0.37   10.5   5.0       0.66    9.7   0.6    2.7  3  PF05120.7  Gas vesicle protein G


Domain annotation for each model (and alignments):
>> PF03388.8  Legume-like lectin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0     9e-09   1.8e-05     161     228 ..      36     103 ..       1     105 [. 0.69

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 9e-09
   PF03388.8 161 yptrikikYdknvltvliddgllenkneyklCfqve...nvelPtgyyfgvsaatgdlsdnhdvlslkllq 228
                   +r+k+  + ++l v id    +n+ e+k C  v+        +  ++gv+a tg+l+dnhdv+sl++++
  MMETSP1325-20131115|3868_1  36 STSRAKVVVTGKRLVVQID---GKNSGEFKDCAVVDlpfAADWAKSAHVGVTASTGQLADNHDVISLTTFS 103
                 3345555555566666666...489999****988633345566899********************9985 PP

>> PF13440.1  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   7.4e-06     0.014     120     171 ..     214     266 ..     204     271 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7.4e-06
   PF13440.1 120 fraaavsdilrslvv.alllvllallgltlaslllawaasalvaalialllsr 171
                  r++ v ++l+  ++  +++v+ ++ g+ l +++l ++++a+++a ++++++ 
  MMETSP1325-20131115|3868_1 214 HRISSVEKVLNGKISeSVVAVTSGMGGWKLPFFFLFVMFVAGAVAFYMWYQNM 266
                 566777777777788889********************************875 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.7   5.5e-05      0.11      22      78 ..     150     200 ..     129     210 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.5e-05
   PF09304.5  22 ersledekvsqeeLakqkdeLksllasleaqkaerekrlrelqakid.ellknlekek 78 
                 e+          eL+   d++k + a l+aq+a  e r+ el+ak+  ++  ++ek +
  MMETSP1325-20131115|3868_1 150 EH------HTEHELMAVEDHIKVSTAKLQAQEAISEGRIDELEAKVVsNINGGIEK-R 200
                 33......44567888889999***********************85145555554.3 PP

>> PF03194.10  LUC7 N_terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.0   3.1e-05     0.061      68     159 ..     132     224 ..     125     237 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.1e-05
  PF03194.10  68 Yerasksqdlkkyeeeale.alevlvhdvdrkidkakqrleetqeeqtkeaaelkaeelaeleeeinkllkeaeelgeegkvdeaqklmeeve 159
                 +er +   ++     e+le + e+ +  v+ +i++  ++l+ ++   + + +el+a+ +++++  i+k lk++e+   eg v    ++ ++++
  MMETSP1325-20131115|3868_1 132 FERLEDAVSKILDKLEYLEhHTEHELMAVEDHIKVSTAKLQAQEAISEGRIDELEAKVVSNINGGIEKRLKQLESSLDEGLVHRISSVEKVLN 224
                 55555555555455566652567899******************************************************9998777766665 PP

>> PF07703.9  Alpha-2-macroglobulin family N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   5.9e-05      0.12      17      73 ..      20      86 ..      17     117 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.9e-05
                EEEEEEECEESEEEEEEEE---EEE--...-EE-SSEEE.......EEEEE--CCCTSEEEEEEEEE CS
   PF07703.9 17 kvnvkyttetgkalylvesrgkvvssg...sveleeeep.......tielpvtaemapnakllvyyv 73
                + n++y ++ +++ +   sr kvv +g   +v+++++++       +++lp  a++a +a++ v++ 
  MMETSP1325-20131115|3868_1 20 DSNIRYHEDRADFSVESTSRAKVVVTGkrlVVQIDGKNSgefkdcaVVDLPFAADWAKSAHVGVTAS 86
                569999*9*******************99877777777788*********************99976 PP

>> PF11945.3  WAHD domain of WASH complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   7.2e-05      0.14      15      66 ..     134     189 ..     130     207 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 7.2e-05
   PF11945.3  15 RreeairqivdalqylekvseDvFdrisqrveknrarLea...i.eeRvklaqaki 66 
                 R e+a+ +i d l+yle+ +e     + + ++ + a+L+a   i e+R++  +ak+
  MMETSP1325-20131115|3868_1 134 RLEDAVSKILDKLEYLEHHTEHELMAVEDHIKVSTAKLQAqeaIsEGRIDELEAKV 189
                 779**********************************9873334357999999997 PP

>> PF05120.7  Gas vesicle protein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.6   0.00034      0.66      42      71 ..     119     152 ..     109     163 .. 0.78
   2 ?   -1.5   0.1         1     2e+03      31      51 ..     164     184 ..     154     188 .. 0.74
   3 ?    1.4   0.0      0.13   2.5e+02      33      48 ..     197     212 ..     190     215 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00034
   PF05120.7  42 leleaGe.IseeeFdrrEe...eLLdrlealkra 71 
                  ++e+G+ Is+e F+r E+   ++Ld+le l++ 
  MMETSP1325-20131115|3868_1 119 PSFEKGDgISQERFERLEDavsKILDKLEYLEHH 152
                 57899988**********8444699999988863 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1
   PF05120.7  31 enlrkeLaeLqleleaGeIse 51 
                  ++ ++ +++q +  +G I+e
  MMETSP1325-20131115|3868_1 164 IKVSTAKLQAQEAISEGRIDE 184
                 556666677888888899988 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.13
   PF05120.7  33 lrkeLaeLqleleaGe 48 
                 ++k+L +L+ +l++G 
  MMETSP1325-20131115|3868_1 197 IEKRLKQLESSLDEGL 212
                 789**********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       771  (0.0563926); expected 273.4 (0.02)
Passed bias filter:                      567  (0.0414716); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.40s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 1147.73
//
Query:       MMETSP1325-20131115|3865_1  [L=519]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   8.7e-142  473.4   0.0     1e-141  473.2   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor
     0.0024   17.0   0.0     0.0036   16.5   0.0    1.1  1  PF11945.3  WAHD domain of WASH complex


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  473.2   0.0  1.5e-145    1e-141     233     708 .]      38     516 ..      35     516 .. 0.96

  Alignments for each domain:
  == domain 1    score: 473.2 bits;  conditional E-value: 1.5e-145
  PF03028.10 233 ptGlkanllralss...fkqevlemckkeaefkrllflLcffHAvvqERrkfgplGWnksYeFnegDlrisldvldnyleanapekvpwealryllgeimYGGritddfDrrllrtyleelfteellde.elelapkdesfkvPekkeyeeyleyieeLpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksreekvkqvlkdileklpklfdkeelkekltaeeekdplvvvlvqEiermnillkeirrslkelskglkGeltiteeleellkallkdkvPasWakkaypslkgLaswlsdllkRikqlekwtedllkpktvwlsglfnpqsfltairQsvarknkwpLdklalqvevtkkekeetesapeegvyveGlfleGarwdlkekllaesklkellsalpviwvkaveadkkeeksvyecPvYktkaRke........ltlvltlklktkekkskwilagvalllq 708
                 ++G  an++ +++     +q+++++c+k+ ef rl++ LcffHA++qERr +gplGWn++Y Fn++Dlri  ++l ++l++n  ++vpw+al+y +ge+ YGGr+td++Drr+l t+l++ ++e +  +  ++l + +  f vP+  + e+ + +i+ Lp +  Pe++G+h+Na+i+ +++ t++l++tl+ +    +++ +g g   ++k+++v++dil+klp++ d+e+++ k++  + ++++++vl qE+  +n ll  ir+sl++++k++kG ++++ el ++ ++l++++ Pa+W+kk+ypslk+La +++dll+R+k++++w +d + p ++wlsg+f++q+flt+ +Q++ark ++p+d l +++e++ k++   ++ p++gvy +Glf eGarwd+k+++l+es++k+l+ + pv+w+k+++a +      yecP+Ykt +R++         ++v+t+++ +++++s+wi +gvall q
  MMETSP1325-20131115|3865_1  38 AEGAAANIMGSFKGdpiSDQDFYRSCTKPLEFGRLIYCLCFFHALIQERRLYGPLGWNIPYGFNDSDLRITARQLAMFLDEN--DEVPWKALKYTCGECNYGGRVTDNWDRRTLLTILDKCYNEGVTAQeGYSLSA-SGMFVVPPDGDWESTVDFIDGLPLLAPPEVFGMHENADITKNQNDTNRLFSTLVLTEGGGSGGGGGGGT--DDKIDAVATDILSKLPDNYDMEAAMIKYK-VKWEESMNTVLCQELIKFNRLLTVIRTSLNQIKKAVKGLIVMSVELDAVGSSLVFATQPAMWKKKSYPSLKPLAGYVTDLLERCKFFKQWLDD-KPPPVFWLSGFFFTQAFLTGSKQNFARKFTIPIDALIFDYEMMPKNSY--RNGPRDGVYTYGLFFEGARWDKKAEVLVESQPKVLYTEGPVMWFKPIKAVDLTLYPHYECPLYKTGDRRGvlattghsSNFVCTIRMPSDKPSSHWIGRGVALLTQ 516
                 7899*********98989****************************************************************..*****************************************99883566666.88999*************************************************999888776555554..79**************************7.66779***************************************************************************************8.99*****************************************66555..556**************************************************************************99************************975 PP

>> PF11945.3  WAHD domain of WASH complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   5.2e-07    0.0036     104     190 ..     261     348 ..     246     354 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 5.2e-07
   PF11945.3 104 lelkrsryklqsklraldekslqeklkyypvkvntkkeretvdeaeeGlGsLprnlssvsslLLfnteenlykk..YvtlDplagvvtk 190
                 +e++  +yk++ + + ++  + qe +k+ ++   +++  +++++a +Gl  +  +l +v s L+f t+++++kk  Y  l plag vt 
  MMETSP1325-20131115|3865_1 261 MEAAMIKYKVKWE-ESMNTVLCQELIKFNRLLTVIRTSLNQIKKAVKGLIVMSVELDAVGSSLVFATQPAMWKKksYPSLKPLAGYVTD 348
                 6778889999999.899***********99999999888889*****************************98766999******9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.40s 00:00:01.27 Elapsed: 00:00:00.65
# Mc/sec: 1913.40
//
Query:       MMETSP1325-20131115|3870_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 315.08
//
Query:       MMETSP1325-20131115|3871_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|3873_1  [L=410]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.34s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 2046.89
//
Query:       MMETSP1325-20131115|3874_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.64
# Mc/sec: 220.91
//
Query:       MMETSP1325-20131115|3877_1  [L=631]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       914  (0.066852); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.01u 0.36s 00:00:01.37 Elapsed: 00:00:00.66
# Mc/sec: 2291.06
//
Query:       MMETSP1325-20131115|3859_1  [L=594]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.078   12.7   0.1       0.14   11.8   0.1    1.5  1  PF08615.6 Ribonuclease H2 non-catalytic subunit (Ylr154p-like)


Domain annotation for each model (and alignments):
>> PF08615.6  Ribonuclease H2 non-catalytic subunit (Ylr154p-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   1.1e-05      0.14      17      99 ..     155     406 ..     150     514 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.1e-05
                 HHHHTCC........C-EE----....................................................................................................................EEEE----EEB--EEE-----E-EEEESS-----E....................................EB--BSSS---S-SGGG-----B.....................- CS
   PF08615.6  17 taeyfqprksakpassvkadqqql...................................................................................................................llaaFRGrklvGqelslpegyrgivlsttnrpnkg....................................sddeqeeeddedgegeetartks.....................l 99 
                 + +yf+p++sa+++s+ ++  +++                                                                                                                     a+ RG ++   e+s +  ++ ++ s + ++ k+                                      +e++ e de+ e+ e+ +  +                     l
  MMETSP1325-20131115|3859_1 155 VYHYFKPKPSASSSSASGDGVEDVvcvicldaidfsvakkrqnivqpkcgcppyhancmtgwtnsqrdknvaapcpsckgcplhdrshhylpsptedvpnpckrcyacddvatltafstgpglskssralciqniqaihTQAYVRGEQVKEGEMSAEMMVKQFISSMQAEKAKSlgvnhhpaqrqaraavrredanarasrhatrernkrA-AEEQAERDEQAEQAERVQ--NnakrqdrrdrrdrdqppsqraL 406
                 779****99987555555444444777777777777777777778888888899999999999999999999999999999999999999999999999999999999999999999999999999999999999999999****************************99988************************9999988876531.222222222222222222..12234455555555555555550 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1375  (0.100571); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.12u 0.33s 00:00:01.45 Elapsed: 00:00:00.72
# Mc/sec: 1976.99
//
Query:       MMETSP1325-20131115|3879_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-16   59.7   0.0    3.5e-16   58.9   0.0    1.4  1  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   2.6e-20   3.5e-16      97     169 ..       2      91 ..       1      96 [. 0.94

  Alignments for each domain:
  == domain 1    score: 58.9 bits;  conditional E-value: 2.6e-20
  PF01504.13  97 ekyDLKGstvgRevkekekekkaavlkDldlleek.................ellnlekekkkllleqlkkDtefLeslnimDYSLLlgi 169
                 +k+DLKGs ++R+v+++e+++   vlkDl++ +++                 ++l+++k   +++++++ +D++fL+ +nimDYSLLlg 
  MMETSP1325-20131115|3879_1   2 QKFDLKGSLLKRYVTDEERDAGVSVLKDLNFCQHHngtdnkgntikalpgpcRKLRIGKLRWSSFVANIMNDVDFLRAHNIMDYSLLLGT 91 
                 79************8877777799********99779999************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 447.01
//
Query:       MMETSP1325-20131115|3880_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|3881_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 440.15
//
Query:       MMETSP1325-20131115|3878_1  [L=529]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-05   22.9   0.7    0.00014   21.9   0.1    1.9  2  PF06985.6 Heterokaryon incompatibility protein (HET)


Domain annotation for each model (and alignments):
>> PF06985.6  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.44   6.1e+03      79     105 ..      54      80 ..      27     105 .. 0.54
   2 !   21.9   0.1     1e-08   0.00014       6      84 ..     184     266 ..     180     308 .. 0.70

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 0.44
   PF06985.6  79 vwlgeesedsllalealralkkeslee 105
                   l++++ + ++++++l++l + + + 
  MMETSP1325-20131115|3878_1  54 QTLADSERSPQAKMRRLSRLGSMHFSP 80 
                 444444333355555554444433333 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 1e-08
   PF06985.6   6 YvWgdsedkeeielng.kelsvtenledalrqlrk...dgerylWiDaiCInqdddaekseqvqsmgdiYskaelvivwlgee 84 
                 + W ++ +k+    +g k   + + le+++r           ++WiD  CI+qdd++ +s+ ++s  +  ++a +v+  ++ +
  MMETSP1325-20131115|3878_1 184 HRWWNPAQKHPDDEHGsKYAIISNALEEMIRTSGVdleTTNVVIWIDYACIDQDDSELQSRGIASLVSYAARADVVLTPVQVK 266
                 7787777744444444044444455677777664334345578***********99999999***999999999999877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       496  (0.0362785); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.85u 0.41s 00:00:01.26 Elapsed: 00:00:00.53
# Mc/sec: 2391.84
//
Query:       MMETSP1325-20131115|3872_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   15.2   0.8       0.13   12.6   0.1    2.6  2  PF08609.5 Nucleotide exchange factor Fes1


Domain annotation for each model (and alignments):
>> PF08609.5  Nucleotide exchange factor Fes1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   9.3e-06      0.13       7      64 ..      32      84 ..      27     126 .. 0.61
   2 ?   -0.9   0.0      0.15   2.1e+03      20      45 ..     195     221 ..     180     244 .. 0.52

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 9.3e-06
   PF08609.5  7 eLLkwsienstteakdstesadapkstnedldpevLealfggpsdaelmkeamevitd 64
                +LLkwsi+++++ +++s+e+  ap s   + + e+Lea++   +  +l+k+a e++++
  MMETSP1325-20131115|3872_1 32 ALLKWSIAQTAEGDGTSSEPP-APMS---KEKREFLEAVM-KDGVVDLVKRAGEILES 84
                79********77777766654.4434...34667777777.44445666666666655 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.15
   PF08609.5  20 akdstesadapkstn....edldpevLeal 45 
                  +++++ + ap   +    ++l  ++L+a+
  MMETSP1325-20131115|3872_1 195 TGSEAAADAAP---SkptsNQLRLKALHAM 221
                 22222222222...0222366666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.37s 00:00:01.05 Elapsed: 00:00:00.86
# Mc/sec: 1064.43
//
Query:       MMETSP1325-20131115|3869_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-50  170.5   0.0    1.3e-50  170.2   0.0    1.1  1  PF00179.21 Ubiquitin-conjugating enzyme
     0.0027   17.4   0.1     0.0034   17.1   0.1    1.5  1  PF05773.17 RWD domain
  ------ inclusion threshold ------
      0.013   15.2   0.0      0.018   14.6   0.0    1.3  1  PF14461.1  Prokaryotic E2 family B
      0.069   12.7   0.0       0.11   12.1   0.0    1.3  1  PF05743.8  UEV domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.2   0.0   3.9e-54   1.3e-50       1     139 [.      41     177 ..      41     178 .. 0.98

  Alignments for each domain:
  == domain 1    score: 170.2 bits;  conditional E-value: 3.9e-54
                 HHHHHHHHHHHS-TTCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-----B-HGGGSTTT--TT--HHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
  PF00179.21   1 rlqkelkelskkkpegikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvdetGeicldiLkeekWspaltlesvLlsiqsllaepnpesplnkeaakllkknreeykkkvkek 139
                 r++kelk+ls+++p++++a++v d +l+ w+++i+gp+++pY+gg++ l+i+fp +YPfkPPkv f+t+i+H+n++++G icldiLk++ Wspalt+++vLlsi+sll++pnp++pl  e+a++l++n+ee++++++e+
  MMETSP1325-20131115|3869_1  41 RINKELKDLSNEPPANCSAGPVAD-DLFFWQATIMGPDDSPYAGGVYFLNIHFPADYPFKPPKVSFTTRIYHCNINSNGGICLDILKDQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAEKLRSNKEEHDTTAREW 177
                 799********************8.**************************************************************88.*******************************************999876 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   9.9e-07    0.0034      50      95 ..      85     132 ..       5     170 .. 0.72

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 9.9e-07
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx RF
  PF05773.17  50 sleleirlpedYPeeaPiitlsstelsl..kelrkrleekleelaeen 95 
                  + l+i++p dYP ++P++++++       +++   + + l++++   
  MMETSP1325-20131115|3869_1  85 VYFLNIHFPADYPFKPPKVSFTTRIYHCniNSNGGICLDILKDQWSPA 132
                 6779****************8775444333445555555555555555 PP

>> PF14461.1  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   5.3e-06     0.018      35     105 ..      83     147 ..      81     178 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 5.3e-06
   PF14461.1  35 ggtipirlvipdefplvlpkvfladklearllpHvese..gaLCllerpsanwdpndlaslaeslrsqiqlll 105
                 gg++++ + +p ++p ++pkv  + +     ++H++ +  g +Cl   + ++w p    +  ++l+s   ll+
  MMETSP1325-20131115|3869_1  83 GGVYFLNIHFPADYPFKPPKVSFTTR-----IYHCNINsnGGICLDILK-DQWSP--ALTISKVLLSICSLLT 147
                 789999999*****************.....***998888*****9999.9**99..5666666666665555 PP

>> PF05743.8  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.1e-05      0.11      53     113 ..      89     144 ..      79     155 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.1e-05
                 EEE--TTTTTS--EEEE-GCC--TSGGGGGB-----B--HHHH.S--TTT--HHHHHHHHHH CS
   PF05743.8  53 liwvpesyPveaPivyvkptksmvikknenvdaqGrvylpyLe.eWkreksnlvslvqelaq 113
                  i  p +yP+++P v+   +       ++n++++G + l++L+ +W++ + ++++++ ++++
  MMETSP1325-20131115|3869_1  89 NIHFPADYPFKPPKVSFTTRIY-----HCNINSNGGICLDILKdQWSP-ALTISKVLLSICS 144
                 577899*******998766544.....78*************725776.6666555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.42s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 859.87
//
Query:       MMETSP1325-20131115|3885_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.035   14.2   2.0       0.23   11.6   0.1    2.1  2  PF01666.12 DX module


Domain annotation for each model (and alignments):
>> PF01666.12  DX module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.7e-05      0.23      43      72 ..       3      32 ..       1      35 [. 0.87
   2 ?    2.7   0.1      0.01   1.4e+02       6      22 ..      36      53 ..      34      82 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.7e-05
  PF01666.12 43 rkelkrkCsinrdCsegdVCViknkesaeC 72
                rk+ +++ s+n dC eg+ C++ +++ + C
  MMETSP1325-20131115|3885_1  3 RKSRWNATSTNHDCPEGKYCIMGTEHPKDC 32
                67788999*************988887777 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.01
  PF01666.12  6 vkCdakekipikya.faf 22
                vkCd+k++ p++y  f++
  MMETSP1325-20131115|3885_1 36 VKCDEKSQNPVQYGcFVY 53
                69******9999864554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 385.13
//
Query:       MMETSP1325-20131115|3886_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 258.07
//
Query:       MMETSP1325-20131115|3887_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-18   65.2   0.0    4.8e-18   65.0   0.0    1.0  1  PF01266.19 FAD dependent oxidoreductase
  ------ inclusion threshold ------
      0.051   13.1   0.0        0.1   12.1   0.0    1.5  2  PF10607.4  CTLH/CRA C-terminal to LisH motif domain


Domain annotation for each model (and alignments):
>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.0     7e-22   4.8e-18     216     357 ..       3     133 ..       1     134 [. 0.87

  Alignments for each domain:
  == domain 1    score: 65.0 bits;  conditional E-value: 7e-22
                 EEEEEEEEEEEE-TCCHSCCCEEEEEEEECGGTSEEEEEET..TEEE.E-EEE.SCEEESCBHHHH.HHHCCTHHHHHHHHHHHHHHSGGGGGSEEEEEEEEEEEEETTSCSBEEEBTTETTEEEEE--G----TTTTTHHHHHHH CS
  PF01266.19 216 irpvrgqvlvtepltdelaaavilgpvavldargvfvlpre..gevl.vgttd.grldrgataeessgedvdvdlevdelleaaakllpqlkdaeilrawaGlrpvtpdglpvigevpevpglyvatGhsghGftlapaaGkllae 357
                 i+pv+g+++++   +++++aa+  ++v+ ld++  +v+ r   +++  +gt++ ++++r+ ++++  +           l+ ++++++p++++ e +  waGlrp++p+ lp +g     pg++++tGh++ G+tl++a+++++a+
  MMETSP1325-20131115|3887_1   3 IYPVKGYSITVNLKDEASQAAA--PWVSLLDDKAKIVTSRLgvDRFRiAGTAEfNGYNRDIRQDRI-D----------PLIAWCNEHFPDISTKECI-PWAGLRPMMPNMLPRVGA-GSKPGVFYNTGHGHLGWTLSAATAEMVAD 133
                 89***********999997777..999999999999999996644430446666666666666666.5..........9******************.******************.89*************************98 PP

>> PF10607.4  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.5e-05       0.1       8      34 ..      57      83 ..      51      99 .. 0.86
   2 ?   -2.4   0.0      0.47   3.2e+03      96     117 ..     117     138 ..     110     139 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.5e-05
   PF10607.4  8 Irklilegdlseaiewtnenkpelles 34
                   +i++ +++++i+w+ne++p ++ +
  MMETSP1325-20131115|3887_1 57 YNRDIRQDRIDPLIAWCNEHFPDISTK 83
                56799*****************99876 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 0.47
   PF10607.4  96 splknlldpsrrekvaeefnsa 117
                  +l++ l+ +  e va+e+ +a
  MMETSP1325-20131115|3887_1 117 GHLGWTLSAATAEMVADEVEQA 138
                 4688999999999999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 699.35
//
Query:       MMETSP1325-20131115|3889_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1291.37
//
Query:       MMETSP1325-20131115|3890_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-16   58.6   0.1    6.2e-16   58.1   0.0    1.3  1  PF03061.17 Thioesterase superfamily
     0.0088   15.7   0.0     0.0094   15.6   0.0    1.1  1  PF13622.1  Thioesterase-like superfamily


Domain annotation for each model (and alignments):
>> PF03061.17  Thioesterase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.1   0.0     9e-20   6.2e-16       1      78 [.      38     114 ..      38     115 .. 0.98

  Alignments for each domain:
  == domain 1    score: 58.1 bits;  conditional E-value: 9e-20
                 TSSB-CHHHHHHHHHHHHHHHHHTSTCTEEEEEEEEEEEESS---TTSEEEEEEEEEEE-SSEEEEEEEEEETTSEEE CS
  PF03061.17   1 gGivhgGvylalldeaaglalrslggsgqgvvvvelnidFlrpvrlgdvltvearvlrlgrtsavvevevrdedgrlv 78 
                 +G++hgG++ +++d+++++a++s   + +  v vel  ++ ++++ g  +t+e+r+l+lg++ a+++v++++edg+ v
  MMETSP1325-20131115|3890_1  38 YGTLHGGAISTIVDVVGTMAIMSKDPT-KPGVSVELGTSYASAAKSGTMVTIEGRLLKLGGKLAFTQVDIFREDGKIV 114
                 69*************************.**********************************************9876 PP

>> PF13622.1  Thioesterase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.4e-06    0.0094     176     253 ..      46     120 ..       9     122 .] 0.84

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.4e-06
   PF13622.1 176 LaflaDalppatlaaldgaayaaaatlsltvhfkrlpaeggeWlllrartkragnGradsearlwdedGelvAtstQd 253
                 +  ++D+ +++++ + d+    +  +++l     +  a  g  + ++ r  ++g+  a +++ ++ edG +vAt++++
  MMETSP1325-20131115|3890_1  46 ISTIVDVVGTMAIMSKDPT--KPGVSVELGTS-YASAAKSGTMVTIEGRLLKLGGKLAFTQVDIFREDGKIVATGRHT 120
                 5567899999999888887..67779999999.888899999********************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.55
# Mc/sec: 531.56
//
Query:       MMETSP1325-20131115|3891_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-06   26.5   1.0      0.012   15.4   0.3    2.7  2  PF13516.1 Leucine Rich repeat
    0.00036   19.9   0.8    0.00094   18.6   0.6    1.8  1  PF12799.2 Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
       0.15   12.2   1.1         10    6.7   0.2    3.1  2  PF13504.1 Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00029       1.3       4      23 ..     100     119 ..      97     120 .. 0.88
   2 !   15.4   0.3   2.6e-06     0.012       1      22 [.     121     142 ..     121     148 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00029
   PF13516.1   4 LtsLdLsnNqigdeGlsaLa 23 
                 L++L L ++ ++d+G+  La
  MMETSP1325-20131115|3891_1 100 LRTLELDSCAVSDDGVLRLA 119
                 99*************98776 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 2.6e-06
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaL 22 
                 l++Lt L+L ++ i++eGl ++
  MMETSP1325-20131115|3891_1 121 LQSLTKLNLADTRITNEGLNHI 142
                 699***************9765 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.6   2.1e-07   0.00094       1      38 [.      98     136 ..      98     151 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 2.1e-07
   PF12799.2   1 tnLevLdLsnNnIkd..lppelanLpnLktLnLsnNpisd 38 
                 t L++L L ++ ++d  +   la+L++L+ LnL+ ++i++
  MMETSP1325-20131115|3891_1  98 TGLRTLELDSCAVSDdgVLR-LAKLQSLTKLNLADTRITN 136
                 579**********9878888.**************99986 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.035   1.6e+02       2      12 ..      99     109 ..      98     119 .. 0.85
   2 ?    6.7   0.2    0.0022        10       2      14 ..     123     135 ..     122     149 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.035
   PF13504.1   2 nLkeLdLsgnr 12 
                  L++L L ++ 
  MMETSP1325-20131115|3891_1  99 GLRTLELDSCA 109
                 69*****9995 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0022
   PF13504.1   2 nLkeLdLsgnrLt 14 
                 +L++L+L+++r+t
  MMETSP1325-20131115|3891_1 123 SLTKLNLADTRIT 135
                 8*******99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 650.44
//
Query:       MMETSP1325-20131115|3892_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-09   36.9   0.1    2.9e-09   36.8   0.0    1.0  1  PF13535.1 ATP-grasp domain
  ------ inclusion threshold ------
      0.062   12.9   0.0        8.7    6.1   0.0    2.1  2  PF04282.8 Family of unknown function (DUF438)


Domain annotation for each model (and alignments):
>> PF13535.1  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0   4.2e-13   2.9e-09      10      75 ..       3      71 ..       2      79 .. 0.94

  Alignments for each domain:
  == domain 1    score: 36.8 bits;  conditional E-value: 4.2e-13
   PF13535.1 10 ellaeaglpvprfalvdseedleaaaeeig...fpvvlKPadgagslgvrrvddaaeleaalealaaev 75
                e++++ag++++r+  +++  ++e+++++++   f +++KP ++ags +v+++++ +e+++a+e+++++ 
  MMETSP1325-20131115|3892_1  3 ETVRAAGVRAVRQTKATEWVQIEQFLADWNpdpFVAIVKPIQSAGSDDVFKCQSVEEVRTAFEKINGSI 71
                57899************************9999*******************************99876 PP

>> PF04282.8  Family of unknown function (DUF438)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0026        18      16      41 ..       3      28 ..       1      31 [. 0.90
   2 ?    6.1   0.0    0.0013       8.7      11      32 ..      53      74 ..      49      78 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0026
   PF04282.8 16 eevkerfkellkgvsalEisamEqeL 41
                e v++   +++ + +a+E +++Eq L
  MMETSP1325-20131115|3892_1  3 ETVRAAGVRAVRQTKATEWVQIEQFL 28
                679999999***************87 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0013
   PF04282.8 11 kgksveevkerfkellkgvsal 32
                k +sveev+  f+++ +++sa+
  MMETSP1325-20131115|3892_1 53 KCQSVEEVRTAFEKINGSISAI 74
                5689************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 342.34
//
Query:       MMETSP1325-20131115|3893_1  [L=489]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-68  228.9   2.1      5e-68  228.6   1.5    1.1  1  PF01126.15 Heme oxygenase


Domain annotation for each model (and alignments):
>> PF01126.15  Heme oxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.6   1.5   3.6e-72     5e-68       2     205 .]     128     332 ..     127     332 .. 0.99

  Alignments for each domain:
  == domain 1    score: 228.6 bits;  conditional E-value: 3.6e-72
                 SHHHHHHHHTHHHHHHHHCSHHHHHHH---S-HHHHHHHHHHHHHHHHHHHHHHHHCTTSTTCGGGS-G.HHHTHHHHHHHHHHHGGTTHHHHHHHHHHHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHHT-HHHHHHHHHHHCT-BCCB-GGGGGS-TT-SSHHHHHHHHHHHHHTS---HHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01126.15   2 alakeLreaTkdvHneaenlvfvkeflkgsvdkeaYkkllanlyelykalEeeleenkdspviapilfp.eLhRkaaLerdlaylygsdwrkdieispavqkyverlekiaaeepellvAhaYtrylgdLSGGqllkkiaaralelpeeceatafyefesisdrkvfkqeYreaLdslelddearaavveeAreaFrlnievvre 205
                 a+ak L+e+Tk +H+ aen+ +v+ef++ +v++e Yk+ +anly++y+alE++ +e++++p++a+i+ p eLhR+a+Le+dl+++ g+dw++ +e++p +++yv+rl ++++++p+llv haYtry+gdLSGGq+lk+ a +a++lp+++++++fyefe +++ k fk++Yr++Lds+++d +a +++v+eA++aF ln+++++e
  MMETSP1325-20131115|3893_1 128 AVAKLLKEGTKVAHKAAENVHYVREFIHCRVTREVYKQNVANLYFVYQALEAAFDEHAAHPALAAIYYPkELHRTATLEKDLEFYWGADWKDLVEPTPIAREYVARLYEVSRNDPLLLVPHAYTRYMGDLSGGQVLKRSAVKAMGLPSNGDGVRFYEFEHVDNMKTFKKAYRQQLDSMPIDATAADRMVAEANQAFDLNTRLFHE 332
                 5799******************************************************************************************************************************************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.40s 00:00:01.18 Elapsed: 00:00:00.62
# Mc/sec: 1890.03
//
Query:       MMETSP1325-20131115|3894_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.07   12.3   0.0       0.12   11.5   0.0    1.3  1  PF10707.4 PhoP regulatory network protein YrbL


Domain annotation for each model (and alignments):
>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.9e-06      0.12      99     158 ..      71     132 ..      68     136 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8.9e-06
   PF10707.4  99 irdadGnvsetLeell..kedgltaalaeaLeefleallenrIvardlkpknivvgrrsege 158
                 ir ++Gnv+  +++ l   +++ ++++++ +++ +++ +e+ +  +d+  +n v+ ++++++
  MMETSP1325-20131115|3894_1  71 IRLKEGNVGAFCDNALrpLKNRTNEDHEAIVNKWFSRYCEQPVALHDMPEHNKVWIQKAATD 132
                 77799***********6658889999*****************************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 878.66
//
Query:       MMETSP1325-20131115|3895_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|3897_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 367.10
//
Query:       MMETSP1325-20131115|3898_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-08   34.3   0.1    3.7e-07   29.7   0.0    1.9  2  PF08240.7 Alcohol dehydrogenase GroES-like domain


Domain annotation for each model (and alignments):
>> PF08240.7  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   2.7e-11   3.7e-07      11      61 ..       2      60 ..       1      64 [. 0.88
   2 !    4.2   0.0    0.0022        31      81     109 .]      59      86 ..      58      86 .. 0.77

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 2.7e-11
                B---HHHHHHH--.........TTTT--SSEE----BE-EEEEE----B------EEEE CS
   PF08240.7 11 aGiCgsDlhivkge........kelevklplilGhEivGiveevgegvkklkvGdrvvv 61
                a+i g D+ +++++        +++++k pl+ G++ +G+v ++g+++k+lkvGdrv+ 
  MMETSP1325-20131115|3898_1  2 ASISGDDVGLLQDTfaggtahsRKPSAKDPLVGGMDYAGVVLACGPDCKTLKVGDRVCG 60
                77888888888877888888889999*******************************85 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0022
                 -STBEE---B-----BSEEEECGGGEEEE CS
   PF08240.7  81 ceeakllgvkldGgfaeyvvvpekklvkl 109
                 c  +k ++++ +G+++e++ +pek ++k+
  MMETSP1325-20131115|3898_1  59 CGIMKPFEYQ-PGTWSEQTKAPEKDVCKI 86 
                 4445555555.9************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|3896_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-10   38.4   0.7      1e-09   37.7   0.5    1.4  1  PF00642.19 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
  ------ inclusion threshold ------
       0.62    9.0   5.4       0.67    8.9   3.7    1.0  1  PF12700.2  HlyD family secretion protein
        3.3    7.3   6.3        4.7    6.8   4.3    1.1  1  PF10429.4  Nuclear pore RNA shuttling protein Mtr2


Domain annotation for each model (and alignments):
>> PF00642.19  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.5   2.2e-13     1e-09       1      27 []     123     149 ..     123     149 .. 0.97

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 2.2e-13
                 --S---SGGGG----------SS---- CS
  PF00642.19   1 yktelCrffartGtCpyGdrCkFaHge 27 
                 ykt +Cr+fa++  C++Gd+C FaHge
  MMETSP1325-20131115|3896_1 123 YKTLICRNFAAGIPCKFGDQCDFAHGE 149
                 9**********99************96 PP

>> PF12700.2  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.7   0.00015      0.67      60     125 ..       4      71 ..       1     109 [. 0.75

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00015
   PF12700.2  60 lkealaaldqaeaelealsseeeeeiesklsqfsesrnes..lfedvyklkdeleallnkytnakksl 125
                 + +++++ +q+ a++++++++ +++ ++  +q+ +++ ++     ++++ ++++ ++  +y++a +++
  MMETSP1325-20131115|3896_1   4 QAQQQQQQQQQYAQQQYAQQQYQQQYTHYHQQYAQQYAQQaaAAGQTAQPGEQYAQYAGQYQQAAAQT 71 
                 34444444566778888888888999999999766665551156778888999********9999987 PP

>> PF10429.4  Nuclear pore RNA shuttling protein Mtr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   4.3     0.001       4.7       2      65 ..       7      72 ..       6      82 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.001
                -CCCCHHHHHHHHHHHHCTT-S..--HHHHHTTBECCEEEEEETTEEES-HHHHHHHHHCCS.-EE CS
   PF10429.4  2 nqtqqvetflkkvlasLDeqdp..nkleqflqlflkkqsaivvngqPlaqalaFlkkwlqqvvltq 65
                +q+qq +++ ++ +a+   q++  + ++q++q++ ++ +a    +qP  q +++  +++q+ ++t 
  MMETSP1325-20131115|3896_1  7 QQQQQQQQYAQQQYAQQQYQQQytHYHQQYAQQYAQQAAAAGQTAQPGEQYAQYAGQYQQAAAQTM 72
                78999999**99999988444434889**********************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2490  (0.182124); expected 273.4 (0.02)
Passed bias filter:                      973  (0.0711673); expected 273.4 (0.02)
Passed Vit filter:                       169  (0.012361); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.40s 00:00:01.21 Elapsed: 00:00:00.66
# Mc/sec: 678.97
//
Query:       MMETSP1325-20131115|3899_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 234.84
//
Query:       MMETSP1325-20131115|3902_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0042   17.0   0.1     0.0075   16.1   0.1    1.4  1  PF01480.12 PWI domain
  ------ inclusion threshold ------
      0.042   12.8   0.0      0.057   12.4   0.0    1.2  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF01480.12  PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.1e-06    0.0075      21      66 ..       4      49 ..       2      50 .. 0.94

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.1e-06
  PF01480.12 21 dividyilsqLekkseekeldpkklqinltgfLeknaekFvkeLWe 66
                + ++dyi+sq +k+ ++ eld k + +++ g   ++a++Fv +L+e
  MMETSP1325-20131115|3902_1  4 KRLVDYIYSQSKKEEKDAELDEKYVMKKVVGQASDEAKDFVAQLLE 49
                669**********9999**************************986 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.3e-06     0.057     230     260 .]      23      68 ..       3      68 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.3e-06
                 H..............HHHHHHHHHHT-SSGGGS--.HHHHHTSGGH CS
  PF00069.20 230 s..............eelkdlikkllekdpakRlt.aeeilkhpwl 260
                                +e+kd++ +lle+ p  Rl+  e+++ hpw+
  MMETSP1325-20131115|3902_1  23 LdekyvmkkvvgqasDEAKDFVAQLLEPRPWCRLSgPENLMAHPWF 68 
                 022234455667777********************8899******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 733.29
//
Query:       MMETSP1325-20131115|3903_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.54    9.8   5.0        5.8    6.5   2.0    2.2  2  PF04360.7  Serglycin


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   2.0   0.00042       5.8      99     112 ..       6      19 ..       2      25 .. 0.49
   2 ?    3.6   0.0    0.0032        44      93     110 ..      90     105 ..      36     137 .. 0.69

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00042
   PF04360.7  99 GsGsGsgsGsGfla 112
                 G GsGs+sGsG+ +
  MMETSP1325-20131115|3903_1   6 GYGSGSDSGSGSDS 19 
                 33444444444433 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.0032
   PF04360.7  93 gsgsgsGsGsGsgsGsGf 110
                  sg+ s sG  +gsG   
  MMETSP1325-20131115|3903_1  90 PSGAKSKSGGAAGSG--G 105
                 344445555444444..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       640  (0.046811); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 766.83
//
Query:       MMETSP1325-20131115|3904_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.086   11.6   1.2      0.087   11.6   0.9    1.1  1  PF13292.1 1-deoxy-D-xylulose-5-phosphate synthase
        0.2   11.3   1.3       0.19   11.3   0.9    1.1  1  PF12695.2 Alpha/beta hydrolase family
        0.3   10.7   5.7       0.37   10.4   4.0    1.1  1  PF13245.1 Part of AAA domain


Domain annotation for each model (and alignments):
>> PF13292.1  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.9   1.9e-05     0.087     124     164 ..       4      44 ..       1      53 [. 0.84

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.9e-05
   PF13292.1 124 akardlkgekekvvaviGDgaltgGmafealnnagelkkkl 164
                 +k +d +g+ e+ va iG ga tgG ++ al  a++  + +
  MMETSP1325-20131115|3904_1   4 SKEEDDDGDPETGVACIGAGASTGGTCMCALAAAAAAAAAV 44 
                 5666777889999*******************998877665 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.9   4.2e-05      0.19      59      92 ..      18      50 ..       3      62 .] 0.69

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4.2e-05
   PF12695.2 59 riilvGhSlGGgvalelagrddrvkglvllapfp 92
                 +i +G S GG+ +++la+  + ++++v++a   
  MMETSP1325-20131115|3904_1 18 ACIGAGASTGGTCMCALAAA-AAAAAAVAVAEAV 50
                56789*************97.4666666666533 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.0   8.2e-05      0.37      11      54 ..      16      59 ..      10      60 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 8.2e-05
   PF13245.1 11 pllvvtGgPGtGKTttlaaiiaallaarekp.grsvllvaptgra 54
                ++  + +g+ tG T   +a++aa++aa ++   + v ++a  ++a
  MMETSP1325-20131115|3904_1 16 GVACIGAGASTGGT-CMCALAAAAAAAAAVAvAEAVAVAAAVRAA 59
                677789********.**********99899989999999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1057  (0.0773113); expected 273.4 (0.02)
Passed bias filter:                      563  (0.0411791); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|3905_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-09   37.3   0.0    1.6e-09   37.2   0.0    1.0  1  PF01121.15 Dephospho-CoA kinase


Domain annotation for each model (and alignments):
>> PF01121.15  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   1.2e-13   1.6e-09      40      94 ..       1      59 [.       1      60 [] 0.87

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 1.2e-13
                CTHHHHHHHHHH-GGCCB---.--B-HHHHHHHHHTSH...HHHHHHHHHHHHHHHHHH CS
  PF01121.15 40 pgsealaaiveeFgeeilled.GeLdReaLrekvFsdp...eekkaLnallhPlirrei 94
                pgs+ +++ive+Fg++++ e+ G+++R+ L+ kvFs +   +++k L+a++ P ir +i
  MMETSP1325-20131115|3905_1  1 PGSACFDEIVEAFGQDVVGEEdGRINRKRLGAKVFSAAdstSQRKRLEAIVWPRIRDQI 59
                68999************97766*************965122689************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.57
# Mc/sec: 247.90
//
Query:       MMETSP1325-20131115|3901_1  [L=393]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   12.2   0.0        0.3   11.1   0.0    1.6  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)


Domain annotation for each model (and alignments):
>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.2e-05       0.3       9      73 ..      22      83 ..      17      93 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.2e-05
                TSH---EEEESSTTSSSSEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTSHHHHHHHHHHTHH CS
  PF00595.19  9 rgglGfslkggsdkrdkgifvsevvpggaaeagglkeGDkIlsvNgvdvenvshdeavqaikgkk 73
                +++lGf++   ++   ++   + +  + + + + l+eGD I ++Ng ++e++ +   +++ k+ +
  MMETSP1325-20131115|3901_1 22 EKKLGFRVTDCKES--ETKLRTGLISDQSMASK-LSEGDAIWALNGHTMEELGVTSHKEFAKEVV 83
                56788888876665..47777777777666667.9***************999998888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       582  (0.0425688); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.38s 00:00:01.14 Elapsed: 00:00:00.54
# Mc/sec: 1744.02
//
Query:       MMETSP1325-20131115|3906_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 225.81
//
Query:       MMETSP1325-20131115|3908_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.2   0.0       0.12   11.9   0.0    1.1  1  PF08734.6 GYD domain


Domain annotation for each model (and alignments):
>> PF08734.6  GYD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.9e-06      0.12      31      63 ..       4      36 ..       1      41 [. 0.90

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.9e-06
   PF08734.6 31 slGgkvksfyltlGeyDlvaiveapddesaaal 63
                + G++vk +y t  + D++ ++ +pd  sa+ +
  MMETSP1325-20131115|3908_1  4 KKGVTVKPVYCTAVSLDILYVFSVPDVRSATYA 36
                57************************9998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 278.15
//
Query:       MMETSP1325-20131115|3909_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.62
# Mc/sec: 282.15
//
Query:       MMETSP1325-20131115|3912_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|3907_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-65  220.7  26.4    1.4e-65  220.5  18.3    1.0  1  PF01226.12 Formate/nitrite transporter
  ------ inclusion threshold ------
      0.024   14.7   0.0       0.31   11.2   0.0    2.6  1  PF02415.12 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat


Domain annotation for each model (and alignments):
>> PF01226.12  Formate/nitrite transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.5  18.3     2e-69   1.4e-65      27     249 ..       2     224 ..       1     225 [. 0.98

  Alignments for each domain:
  == domain 1    score: 220.5 bits;  conditional E-value: 2e-69
                 HHH-------HHHHHHHHT---...TTS----TTT----G.GG---HHHHH-----SSTTTC.HHHHCC----SSHHHHHHHHHHH-------HHHHHHHHHHTGGG-------HHHHHHHTTSS--HHHHHH---HHHHHHHHHHHHHTT-SSHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH---TTTSS.HHHHHHHTHHHHH-------------HHHHH CS
  PF01226.12  27 gilAGafialgallalvvasgl...aaaepglakllgglv.FpvGlilvvllgaeLfTgntlllvlallekkvslkkllrnwvivyigNlvGallvalllaasgvltaegavgealvkiaeakvslsfleaflrgilcNwlVclavwlalaakdiagkilaiwlpifafvasgfeHsvanmfliplgiflganvtlvskfilknlipvtlGNivGGavfvgllywli 249
                 g+++G+ i++ga+lal+v++ +   aaa+pgl+++l g++  p+Gl++ +++g+eLfTgnt+++++a le+k+++k+l++nw+ +++gNlvG+ll+a+l +++g+l+   a+ +  +++a ak +++f+ af +g+lcNwlVc+avw+a  a+di +k+la++lpi+ fva+g+eHsvanmf+ip+g+++ga++t + +f+l n++pvtlGN+vGGa++v++ly ++
  MMETSP1325-20131115|3907_1   2 GVVSGCHIGFGAYLALSVGGCVpgiAAANPGLQRILLGVFgLPMGLFMTLVAGGELFTGNTAVVTAAKLEGKATWKNLAKNWGASFMGNLVGSLLLAFLATQAGTLK---ATMAGPLSVAMAKSTQPFMMAFYKGVLCNWLVCMAVWCANNASDIGSKALAVFLPISGFVALGLEHSVANMFMIPFGMLNGADIT-IQQFLLGNILPVTLGNTVGGAICVAGLYNYA 224
                 899*****************99999999******9999877*****************************************************************9...99999******************************************************************************99.****************************886 PP

>> PF02415.12  Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.6e-05      0.31       3      26 ..      57     216 ..      57     218 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.6e-05
  PF02415.12   3 tFsnNtatvsf........................................................................................................................................tptpaaggGGAIy 26 
                 +F++Nta v++                                                                                                                                        + t +   GGAI+
  MMETSP1325-20131115|3907_1  57 LFTGNTAVVTAaklegkatwknlaknwgasfmgnlvgslllaflatqagtlkatmagplsvamakstqpfmmafykgvlcnwlvcmavwcannasdigskalavflpisgfvalglehsvanmfmipfgmlngaditiqqfllgnilPVTLGNTVGGAIC 216
                 599999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 1107.12
//
Query:       MMETSP1325-20131115|3911_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-09   36.4   0.1      6e-09   35.8   0.1    1.3  1  PF04191.8 Phospholipid methyltransferase
     0.0084   16.1   0.0      0.044   13.8   0.0    2.1  2  PF04140.9 Isoprenylcysteine carboxyl methyltransferase (ICMT) family
  ------ inclusion threshold ------
      0.077   12.3   0.1       0.15   11.4   0.0    1.4  1  PF08019.7 Domain of unknown function (DUF1705)


Domain annotation for each model (and alignments):
>> PF04191.8  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.1   1.3e-12     6e-09       7     106 .]      56     157 ..      52     157 .. 0.81

  Alignments for each domain:
  == domain 1    score: 35.8 bits;  conditional E-value: 1.3e-12
   PF04191.8   7 lllillgivlvlssvealgkfgtflgd..ffgelsde.lvtsGiYrvlrNPmyvgstlgfl.GlaLitgslaglllallvllvylialkfvEephlakiYgery 106
                 ++++++g++lv+++v++ + +    g    f +   + l t+++Y  +rNPmy+g +++ l  la+++ + + +l +++v+++   +++  Ee+ l+  +g++y
  MMETSP1325-20131115|3911_1  56 IAVLAVGTALVVTAVDECRSTLRAAGSgaNFTP-V-HgLATGFPYDRTRNPMYTGLVFIALpTLAVVLDTDWLVLPTACVFFYLDKVVIPAEENLLNTYFGDEY 157
                 578899999999999999988777665104433.3.25*****************98887725678888888888899999999999999***********987 PP

>> PF04140.9  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   9.6e-06     0.044      31      92 ..      88     149 ..      81     151 .. 0.76
   2 ?   -1.4   0.0      0.55   2.5e+03      33      63 ..     199     227 ..     176     231 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 9.6e-06
   PF04140.9  31 pdhklvksglykylrHPnYllfvilelatllLlcnakltalvllalvalllf.vRikeEekaL 92 
                 p h l + ++y  +r P Y++ v+++l tl+++++     ++ +a+v + l  v i +Ee+ L
  MMETSP1325-20131115|3911_1  88 PVHGLATGFPYDRTRNPMYTGLVFIALPTLAVVLDT-DWLVLPTACVFFYLDkVVIPAEENLL 149
                 67889999***********************99998.33334444444444456678888877 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.55
   PF04140.9  33 hklvksglykylrHPnYllfvilelatllLl 63 
                 ++ v s   ++lrHP  +   ++ la  +Ll
  MMETSP1325-20131115|3911_1 199 APSVGSVRESVLRHPATIR--AWPLAKPVLL 227
                 5556666667899998766..6666666655 PP

>> PF08019.7  Domain of unknown function (DUF1705)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.4e-05      0.15      74     128 ..      25      79 ..      22      92 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.4e-05
   PF08019.7  74 llgvlPallllkvkikkksllkellsrlllillsllvilliallfykdyasffRn 128
                 ++++l +l+l+++  +++++l + +++l++ +++l+v  +++++   +  s++R 
  MMETSP1325-20131115|3911_1  25 VMALLSSLFLWRLTGNRRRWLPKHAKHLAFRIAVLAVGTALVVTAVDECRSTLRA 79 
                 688999*************************************999999888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.59
# Mc/sec: 1092.58
//
Query:       MMETSP1325-20131115|3914_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   14.0   0.1      0.023   14.0   0.0    1.1  1  PF07929.6 Plasmid pRiA4b ORF-3-like protein
       0.13   11.5   0.3       0.18   11.1   0.2    1.1  1  PF05529.7 B-cell receptor-associated protein 31-like


Domain annotation for each model (and alignments):
>> PF07929.6  Plasmid pRiA4b ORF-3-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.3e-06     0.023      76     150 ..       4      78 ..       1      97 [. 0.91

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 3.3e-06
   PF07929.6  76 eekevrLskvvkekgkrltYeYdfGddWeheikvekilaekeeveypvcldGkraappedvGgvsgyeelleila 150
                 ee++ +++++ ++++++l+ +Yd   d++ + ++ +  a++ee+ ++v ++  r  + ed+G   + ++l e ++
  MMETSP1325-20131115|3914_1   4 EEDDAAIQEITSQEEQQLRRVYDLLCDYHARSHLKREYAQREEKLTAVSVKKPRPGVTEDMGQAAEITKLTEEMS 78 
                 789999******************************999999999999*******************99999876 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   2.6e-05      0.18     116     182 ..      21      90 ..      19      95 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.6e-05
   PF05529.7 116 lrrvvtlvselvkleeklealkkqaesatkaakkl...keekekklkeeveklkkeleekekdlealkkq 182
                 lrrv+ l+++  + +   +++ + +e+ t+ + k      +++ ++++e++kl +e++  ++d+ +l ++
  MMETSP1325-20131115|3914_1  21 LRRVYDLLCDYHARSHLKREYAQREEKLTAVSVKKprpGVTEDMGQAAEITKLTEEMSLLDTDIRRLAER 90 
                 899*******99999988888887776655555557888899999*******************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       837  (0.06122); expected 273.4 (0.02)
Passed bias filter:                      665  (0.0486396); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.78
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|3913_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-24   84.5   0.3    1.1e-07   31.3   0.2    3.7  3  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.026   14.0   0.2      0.054   13.0   0.2    1.5  1  PF13436.1  Glycine-zipper containing OmpA-like membrane domain
       0.13   12.1   0.0       0.21   11.5   0.0    1.3  1  PF11570.3  Coiled-coil receptor-binding R-domain of colicin E2


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   6.1e-10   2.8e-06       1      39 []       2      40 ..       2      40 .. 0.98
   2 !   31.3   0.2   2.4e-11   1.1e-07       9      39 .]      63      94 ..      59      94 .. 0.96
   3 !   21.9   0.1   2.2e-08    0.0001      12      37 ..     218     243 ..     210     245 .. 0.92

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 6.1e-10
                TEEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  1 geckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                g+c++t+++ ++ + ++++ pdg ++a+g++D t+r++d
  MMETSP1325-20131115|3913_1  2 GKCLHTIEEENNQIFALDYRPDGLMFATGGKDATVRVYD 40
                79***********************************98 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 2.4e-11
                SSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  9 gHtspVtcvafspd.gpllasgSrDgtirlWd 39
                gH++ + +++++ +  +ll sg++D+ti +Wd
  MMETSP1325-20131115|3913_1 63 GHSNRIFSIKWHNTdENLLMSGGWDNTIQVWD 94
                9******************************9 PP

  == domain 3    score: 21.9 bits;  conditional E-value: 2.2e-08
                 SSEEEEEEESSSTEEEEEETTSEEEE CS
  PF00400.27  12 spVtcvafspdgpllasgSrDgtirl 37 
                  +V c+++sp + ++a g+ Dgtir+
  MMETSP1325-20131115|3913_1 218 RGVFCLDWSPVQDRIAIGGGDGTIRI 243
                 689**********************9 PP

>> PF13436.1  Glycine-zipper containing OmpA-like membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   1.2e-05     0.054      31      92 ..     161     219 ..     136     222 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.2e-05
   PF13436.1  31 aeCrqyAesqtgakaqeaaesaaegaavGaavGAaagaaaggagagaaiGAaaGllvGaaaG 92 
                 + C+ yA++ ++  a+  ++s+a++ +++   GA  + ++++  aga+  A +G+++G   G
  MMETSP1325-20131115|3913_1 161 QPCMLYAAQFSK--ASVSETSSAARYVAAGGSGANETRIFDR-LAGAGQTALVGTVAGLNRG 219
                 67999**99854..4556677888888888899999999999.6666666666666665444 PP

>> PF11570.3  Coiled-coil receptor-binding R-domain of colicin E2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.7e-05      0.21      73     121 ..     138     196 ..      86     199 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 4.7e-05
   PF11570.3  73 rgWq.......dkvrrldkdvqnknekldaaakekseadesls..rdkaa.lsaaqerr 121
                  +W        ++v+  d  +qn+   l aa+ +k+ + e+ s  r  aa  s+a e r
  MMETSP1325-20131115|3913_1 138 EMWDfqtgelqEQVEWKDSLIQNQPCMLYAAQFSKASVSETSSaaRYVAAgGSGANETR 196
                 45544455544999999999**************9999886651155454268999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.65
# Mc/sec: 1080.20
//
Query:       MMETSP1325-20131115|3916_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-24   83.8   0.0    7.2e-19   67.0   0.0    2.2  2  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    2.4e-14   52.9   0.0      2e-11   43.6   0.0    2.1  2  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    2.6e-06   27.0   0.0      0.074   12.7   0.0    2.4  2  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.025   13.2   0.2      0.031   12.9   0.1    1.1  1  PF05633.6  Protein of unknown function (DUF793)
      0.039   13.6   0.0        0.7    9.6   0.0    2.2  2  PF08777.6  RNA binding motif


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   4.8e-06     0.013      46      69 ..       3      26 ..       2      27 .. 0.94
   2 !   67.0   0.0   2.6e-22   7.2e-19       1      61 [.      65     126 ..      65     127 .] 0.97

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4.8e-06
                ESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17 46 FeseedaekAlealngkklggrel 69
                ++++ +ae+A+++ln+ +l+gr++
  MMETSP1325-20131115|3916_1  3 YANPHEAEAAIQQLNESELDGRNV 26
                899*******************87 PP

  == domain 2    score: 67.0 bits;  conditional E-value: 2.6e-22
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTT CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseedaekAlealng 61 
                 ++V+nL+++v++++Lk+++++ G++++++++ d etg+skg+++Ve+ ++ +a++A++ l g
  MMETSP1325-20131115|3916_1  65 VYVNNLSWEVSWQDLKDHMREAGEVVRADVMMDqETGKSKGCGIVEYRTPTQAQAAIQMLAG 126
                 7*********************************************************9876 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0015       4.2      47      68 ..       4      26 ..       3      26 .. 0.92
   2 !   43.6   0.0   7.2e-15     2e-11       1      59 [.      65     124 ..      65     126 .. 0.98

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0015
   PF14259.1 47 eseedAqkalkkln.lvlkgrti 68
                +++ +A++a+++ln   l+gr +
  MMETSP1325-20131115|3916_1  4 ANPHEAEAAIQQLNeSELDGRNV 26
                7899**********9******87 PP

  == domain 2    score: 43.6 bits;  conditional E-value: 7.2e-15
   PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkalkkl 59 
                 +yv +l+++v+ +dl+++++++g v + +++ ++  g+++g ++ve++++ +Aq+a+++l
  MMETSP1325-20131115|3916_1  65 VYVNNLSWEVSWQDLKDHMREAGEVVRADVMMDQEtGKSKGCGIVEYRTPTQAQAAIQML 124
                 8********************************************************985 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   3.8e-05       0.1      28      53 ..       3      28 ..       2      30 .. 0.90
   2 !   12.7   0.0   2.7e-05     0.074      14      42 ..      93     125 ..      79     127 .] 0.78

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.8e-05
   PF13893.1 28 fdtveaArkakeylngvklygktLkv 53
                ++++ +A+ a+++ln+  l+g+ + v
  MMETSP1325-20131115|3916_1  3 YANPHEAEAAIQQLNESELDGRNVVV 28
                899******************97655 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 2.7e-05
   PF13893.1  14 ikifrkk....ggqAfvefdtveaArkakeyln 42 
                  +++++     +g++ ve+ t+ +A+ a++ l 
  MMETSP1325-20131115|3916_1  93 DVMMDQEtgksKGCGIVEYRTPTQAQAAIQMLA 125
                 556666666668*****************9885 PP

>> PF05633.6  Protein of unknown function (DUF793)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.1e-05     0.031     165     215 ..      26      75 ..       7      85 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.1e-05
   PF05633.6 165 iglldekdsgssggsernrsfgrsksfhrrsigssgggsigqlrslswsvs 215
                 + + +++++gs+gg +r + f+++  ++ +++g  ggg   +++ lsw vs
  MMETSP1325-20131115|3916_1  26 VVVRHDRENGSGGGYNRPQQFNNNMRSNFQQNG-GGGGCRVYVNNLSWEVS 75 
                 677889999999999********9998888888.79999999********8 PP

>> PF08777.6  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.068   1.9e+02      44      61 ..       3      20 ..       2      33 .. 0.77
   2 ?    9.6   0.0   0.00026       0.7       1      56 [.      62     123 ..      62     127 .] 0.79

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.068
                ESS-..HHHH---TTTT- CS
   PF08777.6 44 Fkedeaakkalekatean 61
                ++++++a++a+++++e++
  MMETSP1325-20131115|3916_1  3 YANPHEAEAAIQQLNESE 20
                788999********9992 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00026
                 --EEEEE---SS--HHHHHHHT-----EEEE---------......-EEESS-..HHHH--- CS
   PF08777.6   1 GvivklsGlnkelsredikelfsklgevkyvdfkegdkeg......evrFkedeaakkalek 56 
                 G+ v ++ l+ e+s +d+k+ +++ gev   d+ +++++g      +v + ++ +a++a++ 
  MMETSP1325-20131115|3916_1  62 GCRVYVNNLSWEVSWQDLKDHMREAGEVVRADVMMDQETGkskgcgIVEYRTPTQAQAAIQM 123
                 67777777888999**************9999988888752222337999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 608.67
//
Query:       MMETSP1325-20131115|3917_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       438  (0.0320363); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|3915_1  [L=275]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-19   67.7   0.0    8.2e-19   67.5   0.0    1.0  1  PF05794.8  T-complex protein 11
  ------ inclusion threshold ------
      0.061   12.1   0.0      0.089   11.6   0.0    1.2  1  PF02016.10 LD-carboxypeptidase


Domain annotation for each model (and alignments):
>> PF05794.8  T-complex protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.0   1.2e-22   8.2e-19     229     438 ..      30     262 ..      14     263 .. 0.87

  Alignments for each domain:
  == domain 1    score: 67.5 bits;  conditional E-value: 1.2e-22
   PF05794.8 229 kllirgllkL......liqdneaeefPetLqfDrsRLvelraqlqqlvlvaivllilkqlvvsqksss.aqtieklkkellsllede..gnskwtknlesialqlake......vsaslsesgdsalseekkellkgqlskslqpespVyklvekrifkelreallats........nkkkkalseaqkskpdspaglsdiqseleeiasklarlvkfnwsVfgpyYeeilkk 438
                 + +++g+l L      l     a ++Pet++ D +RL+ +r+ + ++vlva++l+i++q+++++   +  +++e l+++l  ll++      +++++++  a   +         ++ +   ++s+l+ e +e+l++ +s+ + p+++V+ l++kr +  lr ++ a++        ++++   + a    +  + gl+ +q  l e++++l r +++n +V+   Y+++l +
  MMETSP1325-20131115|3915_1  30 ECVADGVLRLvqmpvrLDGPDGAASLPETMAWDGKRLASVRDSMDRVVLVATLLVIARQVLSQKRVIPsDEVMEGLRSKLDWLLQQPntRLPNLQRAVQDTAAAACAAagggagAAEGAGAASTSTLEPELIETLSNLVSSAADPKNSVFALFQKRAYFLLRHMVHAGAaastgtsaAVDGTDRVAAALGATIGKSGLKAFQPLLLETGRRLRRFIDLNSAVHWAVYTRLLHE 262
                 5555666666544444445567889***************************************999999**************9667777788888888888888889****9999*************************************************99999998888666666666666666688999*******************************9976 PP

>> PF02016.10  LD-carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.3e-05     0.089      33      78 ..     101     146 ..      91     158 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.3e-05
  PF02016.10  33 vgenalarkgylagtdeeRaadLheafadpeikailcarGGygair 78 
                 v+e ++++ ++l +++ +R+ +L++a++d +  a  +a GG ga++
  MMETSP1325-20131115|3915_1 101 VMEGLRSKLDWLLQQPNTRLPNLQRAVQDTAAAACAAAGGGAGAAE 146
                 677788889999*******************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.68
# Mc/sec: 969.11
//
Query:       MMETSP1325-20131115|3918_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.053   13.5   0.4      0.075   13.0   0.3    1.2  1  PF04651.8 Poxvirus A12 protein


Domain annotation for each model (and alignments):
>> PF04651.8  Poxvirus A12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   5.5e-06     0.075      14      92 ..      63     143 ..      61     162 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 5.5e-06
   PF04651.8  14 yietlnKltPqLrtlLahisgeqavkkgnlaeaenaaeeleakagkerasassskskrkskstskkksss.....assrsrrsG 92 
                 yi+tl K   qL +l+  +s ++++++   a++e+  ++l    +++++s s s s  +++s ++  + +     +   +r s 
  MMETSP1325-20131115|3918_1  63 YINTLVKRMKQLTALIESLSENTVTRPMFEAKIEELRDALMYDETSSQVSRSRSPSAENMTSEEHMAKLNgingfN--AAR-SS 143
                 9**********************99987767889999998888887888888888888888887775555554321..222.22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       813  (0.0594646); expected 273.4 (0.02)
Passed bias filter:                      684  (0.0500293); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 813.76
//
Query:       MMETSP1325-20131115|3920_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|3922_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   14.2   0.1      0.018   14.2   0.1    1.0  1  PF08006.6  Protein of unknown function (DUF1700)
      0.056   13.5   2.2      0.064   13.3   1.6    1.3  1  PF00524.13 E1 Protein, N terminal domain


Domain annotation for each model (and alignments):
>> PF08006.6  Protein of unknown function (DUF1700)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   2.7e-06     0.018      14      70 ..       4      62 ..       1      81 [. 0.81

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2.7e-06
   PF08006.6 14 LkklpekerkdilsdyeehFeeg..eeeGkseeeIikeLgsPkeiakelkaesaiekae 70
                +++l+++ r ++l+ y e F e   + +G +e++I++  ++  ++ + +  ++ ++k  
  MMETSP1325-20131115|3922_1  4 MEDLNKRHRTSLLEGYYEDFVEAdaADDGEEEDDIATAVQNGSDVTNLVVDRETFKKLA 62
                799*****************986225689****************99999988888873 PP

>> PF00524.13  E1 Protein, N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.6   9.4e-06     0.064      18      53 ..      22      57 ..       4      78 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 9.4e-06
  PF00524.13 18 flvEAecsddeisedeleelfdegsdlsdliDdaev 53
                 +vEA+  dd ++ed+  +++++gsd+ +l+ d e+
  MMETSP1325-20131115|3922_1 22 DFVEADAADDGEEEDDIATAVQNGSDVTNLVVDRET 57
                489****************************77665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       535  (0.0391311); expected 273.4 (0.02)
Passed bias filter:                      390  (0.0285255); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.61
# Mc/sec: 329.99
//
Query:       MMETSP1325-20131115|3923_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.7   0.0      0.053   12.9   0.0    1.3  1  PF08348.6 YheO-like PAS domain
       0.11   12.3   2.3       0.63    9.8   0.1    2.0  2  PF10392.4 Golgi transport complex subunit 5


Domain annotation for each model (and alignments):
>> PF08348.6  YheO-like PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   7.7e-06     0.053      83     111 ..       3      31 ..       2      37 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 7.7e-06
   PF08348.6  83 kSstivirdekgeiiglLCiNldvsvlda 111
                 +Ss+++i d+++++  +L iN+ ++ l+a
  MMETSP1325-20131115|3923_1   3 RSSSAIISDADESVDTTLGINVRLTRLQA 31 
                 8***********************99985 PP

>> PF10392.4  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   9.2e-05      0.63      14      54 ..       5      45 ..       2      61 .. 0.87
   2 ?    2.7   0.2     0.015     1e+02       2      16 ..      70      84 ..      69      88 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 9.2e-05
   PF10392.4 14 anallkatnnnddteldlstplkrlnydiqeldkrlrqlit 54
                ++a+++ + ++ dt l ++++l rl+  i+el   lr++ +
  MMETSP1325-20131115|3923_1  5 SSAIISDADESVDTTLGINVRLTRLQASIDELSGDLRNERN 45
                5778888899999*******************999998755 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.015
   PF10392.4  2 aFLepdFdpksfana 16
                aF e+dF++++++na
  MMETSP1325-20131115|3923_1 70 AFEEEDFEATKYSNA 84
                6899*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|3924_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.7   0.0       0.18   11.2   0.0    1.2  1  PF07400.6 Interleukin 11


Domain annotation for each model (and alignments):
>> PF07400.6  Interleukin 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.3e-05      0.18      22      68 ..      65     116 ..      54     123 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.3e-05
   PF07400.6  22 pgppagspr.....vssdpraeldstvlltrslladtrqlaaqlrdkfpadg 68 
                 pgpp   p      ++ + r+e  s vl+    l+dtr+ a +l  +   dg
  MMETSP1325-20131115|3924_1  65 PGPPGSKPEmligiATVEARSESTSGVLVVTGYLSDTREKALRLERQVSDDG 116
                 8999988863333357899*************************99998888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 708.71
//
Query:       MMETSP1325-20131115|3925_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|3926_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.74
# Mc/sec: 236.40
//
Query:       MMETSP1325-20131115|3928_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 295.27
//
Query:       MMETSP1325-20131115|3929_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0035   17.1   0.2       0.42   10.7   0.0    2.5  2  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   3.1e-05      0.42       2      23 ..      57      78 ..      56      79 .. 0.89
   2 !    4.2   0.0    0.0037        50       6      15 ..      89      99 ..      84     104 .] 0.73

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 3.1e-05
   PF13516.1  2 knLtsLdLsnNqigdeGlsaLa 23
                + Lts +L +N ig+   +a+a
  MMETSP1325-20131115|3929_1 57 QGLTSVNLASNSIGQVATKAFA 78
                669************9999998 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0037
   PF13516.1  6 sLdLsnNq.ig 15
                 L+Ls+N+ +g
  MMETSP1325-20131115|3929_1 89 GLNLSFNPnLG 99
                59*****7566 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 498.44
//
Query:       MMETSP1325-20131115|3931_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 390.52
//
Query:       MMETSP1325-20131115|3934_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 296.28
//
Query:       MMETSP1325-20131115|3930_1  [L=442]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.16   11.2   0.8         25    4.2   0.0    2.5  2  PF03478.13 Protein of unknown function (DUF295)


Domain annotation for each model (and alignments):
>> PF03478.13  Protein of unknown function (DUF295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0    0.0018        25       7      18 ..      92     103 ..      90     116 .. 0.79
   2 ?    3.9   0.8    0.0022        31       6      22 ..     371     387 ..     369     392 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0018
  PF03478.13   7 lGdralFlGkns 18 
                 lG+ralF+  n 
  MMETSP1325-20131115|3930_1  92 LGGRALFVEDNA 103
                 9*******8765 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.0022
  PF03478.13   6 dlGdralFlGknssfcv 22 
                  lG + l+lG+++++c+
  MMETSP1325-20131115|3930_1 371 GLGAATLILGCCCGVCC 387
                 69999***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.59
# Mc/sec: 1795.24
//
Query:       MMETSP1325-20131115|3935_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 354.85
//
Query:       MMETSP1325-20131115|3937_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|3933_1  [L=339]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 1562.24
//
Query:       MMETSP1325-20131115|3938_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-09   35.6   0.0    5.3e-09   35.3   0.0    1.1  1  PF01793.11 Glycolipid 2-alpha-mannosyltransferase


Domain annotation for each model (and alignments):
>> PF01793.11  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   3.9e-13   5.3e-09     262     330 ..      11      79 ..       4      81 .. 0.95

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 3.9e-13
                 -EEE-TTSEEEEHHHHTSHHHHHHHHHHHH-----SS----HHHHHHHHHHHS-GGGB---TT---EET CS
  PF01793.11 262 lChFwsnfeiadldffrseaYekyfeyLdkkggffyerWgDapvhslalallldkdeihyfrdigYrhk 330
                 l h + nf ++dl f+rse   +y+ yL +++ f++  WgD+ + +  l ++++ +++  +  ++++h 
  MMETSP1325-20131115|3938_1  11 LTHLYNNFFLTDLTFWRSEPVVAYLAYLKNSDEFWQGGWGDSLIMAHTLRVFAPPEKLVLLTGLAFTHA 79 
                 67999*************************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 834.12
//
Query:       MMETSP1325-20131115|3939_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|3940_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-25   90.0   1.2    1.8e-25   90.0   0.8    1.7  2  PF00810.13 ER lumen protein retaining receptor
    7.6e-05   22.0   0.3    7.6e-05   22.0   0.2    1.7  2  PF04193.9  PQ loop repeat
     0.0031   17.0   2.5     0.0036   16.7   1.7    1.0  1  PF07185.6  Protein of unknown function (DUF1404)


Domain annotation for each model (and alignments):
>> PF00810.13  ER lumen protein retaining receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.8   3.9e-29   1.8e-25      92     146 ..       2      56 ..       1      57 [. 0.97
   2 ?   -1.1   0.3      0.49   2.2e+03      40      57 ..      68      85 ..      58      93 .. 0.52

  Alignments for each domain:
  == domain 1    score: 90.0 bits;  conditional E-value: 3.9e-29
  PF00810.13  92 lieilwtfslylesvaiLPQlfmlqktgkvenltahYvvalglyRvlyllnWiyr 146
                 ++e+lwtfs++les+ai+PQ++mlq+ g+venlt+hYv+++g+yR+ly+lnWiyr
  MMETSP1325-20131115|3940_1   2 ILELLWTFSIFLESIAIVPQIVMLQRDGEVENLTSHYVFFMGAYRALYILNWIYR 56 
                 789***************************************************8 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.49
  PF00810.13 40 ilfivlsvltiylikkky 57
                i++i+ ++ t+ ++ + y
  MMETSP1325-20131115|3940_1 68 IVYIAGTIQTLLYVDFFY 85
                444554554444443333 PP

>> PF04193.9  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.2   1.7e-08   7.6e-05       2      59 ..       3      60 ..       2      62 .. 0.93
   2 ?   -1.2   0.1       0.3   1.4e+03       2      14 ..      69      81 ..      68      84 .. 0.75

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 1.7e-08
   PF04193.9  2 snilGyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilyllylilnsfpp 59
                 ++l ++s++l++++ +PQi++  +   +e l   ++++  +  +ly+l++i +s+  
  MMETSP1325-20131115|3940_1  3 LELLWTFSIFLESIAIVPQIVMLQRDGEVENLTSHYVFFMGAYRALYILNWIYRSYFE 60
                67899***********************************999999999999998875 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.3
   PF04193.9  2 snilGyislvlwl 14
                ++i G+i ++l++
  MMETSP1325-20131115|3940_1 69 VYIAGTIQTLLYV 81
                6788888888775 PP

>> PF07185.6  Protein of unknown function (DUF1404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   1.7     8e-07    0.0036       2      71 ..       9      88 ..       8      94 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 8e-07
   PF07185.6  2 lglvLiilsvnPlteeleskneivymlshyalvigg...iligyklakl.......krislliglilavlwhlPlfFdls 71
                ++++L  +++ P  ++l+   e+  + shy+ ++g+   ++i +++++        +++ ++i++++ +l ++ +f+ + 
  MMETSP1325-20131115|3940_1  9 FSIFLESIAIVPQIVMLQRDGEVENLTSHYVFFMGAyraLYILNWIYRSyfepyyrHNWIVYIAGTIQTLLYVDFFYYYI 88
                7899***************************9998632268888888889999999899999***********9999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       402  (0.0294032); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.43s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 456.23
//
Query:       MMETSP1325-20131115|3943_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.56   10.2  10.6         86    3.2   7.3    2.1  1  PF01826.12 Trypsin Inhibitor like cysteine rich domain


Domain annotation for each model (and alignments):
>> PF01826.12  Trypsin Inhibitor like cysteine rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   7.3    0.0063        86      13      43 ..      32      66 ..      11      69 .. 0.52

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.0063
  PF01826.12 13 aC.ektCdnlekpee..Ce.eeCvegCvCkegfvr 43
                 C ++ C +++ +    C   +  egC+C++g vr
  MMETSP1325-20131115|3943_1 32 DCrQNWCRSPDGHHGfdCWaGTESEGCTCNQGKVR 66
                33334444444443344443344566888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.61
# Mc/sec: 274.99
//
Query:       MMETSP1325-20131115|3946_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-08   33.6   0.0    3.3e-08   33.3   0.0    1.2  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.0   2.4e-12   3.3e-08      37      94 .]       2      90 ..       1      90 [. 0.74

  Alignments for each domain:
  == domain 1    score: 33.3 bits;  conditional E-value: 2.4e-12
                EECCTTSS-HHHHHHHTTSBCTEEEEEEEEGGGT-S-............TTCCTTTS.TT............................-EEEEEEEEE CS
  PF00254.23 37 fkvGsgqvikgleeglegmkvGekrtltippelaYge............kglaggkippn............................atlvfevell 94
                f vG gqv+++leeg++gmk+G+ r+l    +l+Y                        +                            +tl+++v+l+
  MMETSP1325-20131115|3946_1  2 FVVGRGQVVPALEEGIVGMKEGGVRQLVFGTDLGYPFigderegklldpA---------HdkvgpkphtfsgmralnfvlenkgdnvdKTLLLNVKLV 90
                99*********************************995555555554440.........244444455555555555555566666669999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 413.17
//
Query:       MMETSP1325-20131115|3947_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 374.91
//
Query:       MMETSP1325-20131115|3948_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   0.1       0.11   11.9   0.1    1.0  1  PF05463.6 Sclerostin (SOST)


Domain annotation for each model (and alignments):
>> PF05463.6  Sclerostin (SOST)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   7.7e-06      0.11      31      78 ..       5      54 ..       1      55 [] 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 7.7e-06
                XXXXXXXXXXXXXXXXXX---------..----TTTTTSS-S--B----B CS
   PF05463.6 31 vekpvqepennstlnrarnGGrrpess..ldrkeksqvgcrelrstkyis 78
                ++ + q+++++s++     GGr+ + +  l  +e++q  c e   t  ++
  MMETSP1325-20131115|3948_1  5 SSSSSQKSSSSSSVGSCSSGGRPSALTlaLRTDEQQQRQCYEAAVTALLT 54
                5678899****************999865778899999****99887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.44s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|3942_1  [L=430]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        9.8    6.0   7.4        1.6    8.5   0.9    2.6  3  PF02369.11 Bacterial Ig-like domain (group 1)


Domain annotation for each model (and alignments):
>> PF02369.11  Bacterial Ig-like domain (group 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2      0.15     2e+03      62      87 ..      75     100 ..      67     118 .. 0.65
   2 ?   -2.1   0.0      0.23   3.2e+03      31      46 ..     203     218 ..     186     227 .. 0.71
   3 ?    8.5   0.9   0.00012       1.6      41      88 ..     362     409 ..     357     412 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.15
  PF02369.11  62 atTdanGkatvtltstkaGkatVtas 87 
                 a T+ +G+ t+++ +  + +++V+ +
  MMETSP1325-20131115|3942_1  75 ASTEVDGTPTIDVAALGTVDYMVKFK 100
                 55777777777777776666666544 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.23
  PF02369.11  31 VkdanGnpvagqeVtF 46 
                 V+da G p + ++ tF
  MMETSP1325-20131115|3942_1 203 VADATGAPPKAVMLTF 218
                 7888888888888888 PP

  == domain 3    score: 8.5 bits;  conditional E-value: 0.00012
  PF02369.11  41 gqeVtFsdtsssatlsnkntkatTdanGkatvtltstkaGkatVtasl 88 
                 +q   F  +  ++tl++++   +T ++G+  v++ +  a    Vta++
  MMETSP1325-20131115|3942_1 362 DQVFEFTVDNPAFTLGATSATIKTKESGTVAVKFDGAGAAAGPVTAKV 409
                 5555677788999**99988999***************9999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.32s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 2102.93
//
Query:       MMETSP1325-20131115|3951_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 404.39
//
Query:       MMETSP1325-20131115|3941_1  [L=483]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.2   0.2    0.00035   19.9   0.1    1.7  1  PF03167.14 Uracil DNA glycosylase superfamily


Domain annotation for each model (and alignments):
>> PF03167.14  Uracil DNA glycosylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   2.5e-08   0.00035       7     147 ..     294     455 ..     288     460 .. 0.70

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 2.5e-08
  PF03167.14   7 nakvlivGeaPgpge....datGlpFsgragksLrnilkel......glared......vyitnavkc...nrtvrrkptkseiaac.ep....yLieelallk.pklvvllGktAakallrlgkkekitkvr.....eedkkgvrvlplpHPSplnrnrtlkspehfeka 147
                  a+ +i+G+aP p +    d + ++  g++ ++L ++ + +      +           ++ +   k+   + +++++ tk+e a    p     L++   +l    lv++lG   a+ +  ++++  ++        + +++g+ vl+ pHPS+++  +  ++pe  ++a
  MMETSP1325-20131115|3941_1 294 RARAIIIGQAPPPSSsereDDDFVALQGPPERRLARLVGCAspqelwK----LferrnvLGTWPGSKRrapKHRKAAGYTKHESAGDlFPlndaRLEALRIDLTdYALVIMLGLNVARSFH-VKPELLHR--EvlrptPGSRNGTLVLVFPHPSGVSHFW--NNPERVSRA 455
                 68999******9966566666889999998888888885554444443....044446799999999977644455556666655554557787666654333337799999*******66.85554433..2346778899***************999..677766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.57
# Mc/sec: 1995.59
//
Query:       MMETSP1325-20131115|3949_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-08   31.6   4.4      9e-08   31.6   3.1    2.2  2  PF03908.8  Sec20
    4.9e-05   23.2   4.8    4.9e-05   23.2   3.3    2.3  2  PF12352.3  Snare region anchored in the vesicle membrane C-terminus
    0.00069   18.6  21.0    0.00093   18.2   4.7    2.2  2  PF00261.15 Tropomyosin
     0.0045   16.1   7.4     0.0063   15.6   5.2    1.4  1  PF02601.10 Exonuclease VII, large subunit
  ------ inclusion threshold ------
      0.013   13.8   3.8      0.017   13.4   2.6    1.0  1  PF02990.11 Endomembrane protein 70
      0.018   15.0   3.6      0.018   15.0   2.5    2.6  2  PF13864.1  Calmodulin-binding
      0.042   12.1   1.0      0.058   11.7   0.7    1.2  1  PF04632.7  Fusaric acid resistance protein family
      0.074   12.6   5.1       0.05   13.1   0.7    2.4  2  PF02758.11 PAAD/DAPIN/Pyrin domain
       0.11   11.9  23.5       0.37   10.2   3.3    2.1  2  PF00769.14 Ezrin/radixin/moesin family
       0.17   11.4  13.4        1.9    8.0   0.6    2.5  2  PF01105.19 emp24/gp25L/p24 family/GOLD
       0.26   10.8  24.1       0.84    9.1   9.5    2.1  2  PF03962.10 Mnd1 family
       0.26   10.9  29.8         41    3.8  20.7    2.9  1  PF12718.2  Tropomyosin like
       0.38   10.8  23.6       0.23   11.4   7.1    3.0  3  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
       0.66   10.1  13.2         13    6.0   0.1    3.5  3  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.73    9.4  15.0        1.1    8.7   3.2    2.2  2  PF03233.8  Aphid transmission protein
       0.87    9.2  25.5       0.68    9.5   6.4    2.4  2  PF07926.7  TPR/MLP1/MLP2-like protein
       0.91    7.7  19.3      0.026   12.8   6.7    2.0  2  PF10359.4  RNA pol II promoter Fmp27 protein domain
       0.93    9.1  26.0       0.11   12.1   0.8    3.6  3  PF01920.15 Prefoldin subunit
        1.2    8.8  18.9        2.1    8.0   3.0    2.4  2  PF14235.1  Domain of unknown function (DUF4337)
        1.6    8.3  12.2        3.1    7.4   0.9    3.5  3  PF04325.8  Protein of unknown function (DUF465)
        1.9    7.9  14.3        2.8    7.4   2.3    3.5  3  PF08651.5  DASH complex subunit Duo1
        2.2    7.9  17.1       0.68    9.6   1.1    2.7  2  PF06009.7  Laminin Domain II
        2.4    8.0  21.8       0.84    9.5   3.2    2.6  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        2.7    7.7   6.2       0.48   10.1   0.3    2.0  2  PF10173.4  Mitochondrial K+-H+ exchange-related
        3.1    7.9   9.2       0.21   11.6   1.1    2.4  2  PF05190.13 MutS family domain IV
        3.8    7.4   6.3         10    6.0   1.2    2.8  2  PF04508.7  Viral A-type inclusion protein repeat
        5.5    7.1  16.6        6.6    6.8   3.8    2.4  2  PF09969.4  Uncharacterized conserved protein (DUF2203)
        6.9    7.0  12.6          7    7.0   1.7    3.2  3  PF09278.6  MerR, DNA binding
        8.5    6.7  14.0        2.4    8.4   5.2    2.4  2  PF09177.6  Syntaxin 6, N-terminal
        8.7    5.7  24.4        1.9    7.9   5.2    2.5  3  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)


Domain annotation for each model (and alignments):
>> PF03908.8  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.8       2.3   1.1e+03       8      37 ..      60      92 ..      53     123 .. 0.48
   2 !   31.6   3.1     2e-10     9e-08       5      89 ..     152     236 ..     147     241 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 2.3
   PF03908.8  8 eslraisqllsqevqqS...eenleeldastks 37
                ++l+a +++++   ++    +  l +l+ +t+ 
  MMETSP1325-20131115|3949_1 60 QKLKAAKAQMKTVNKKKtsfQMELRQLHDQTQR 92
                444455555443222220012334444455544 PP

  == domain 2    score: 31.6 bits;  conditional E-value: 2e-10
   PF03908.8   5 qiTeslraisqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglflacvvyvvk 89 
                 q  +sl++  +++ ++ +  +e++eel+ + ++++++ e++  +ed ++ + +l++ + +r +tdk + ++al  +la vv +v+
  MMETSP1325-20131115|3949_1 152 QTEASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFSKRMMTDKCIQIFALMNMLALVVVIVF 236
                 55579999***********************************************************999999888888888875 PP

>> PF12352.3  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         6   2.7e+03      36      49 ..      60      73 ..      56      75 .. 0.52
   2 !   23.2   3.3   1.1e-07   4.9e-05       5      66 .]     152     213 ..     148     213 .. 0.96

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 6
   PF12352.3 36 etLkrarsklhnva 49
                ++Lk a++ +++v+
  MMETSP1325-20131115|3949_1 60 QKLKAAKAQMKTVN 73
                44555555555554 PP

  == domain 2    score: 23.2 bits;  conditional E-value: 1.1e-07
   PF12352.3   5 resdrlknShrivdetisiGaailedLhsQretLkrarsklhnvanrlgksnsiLrsikrRk 66 
                 ++  +l+n + +++   + + +++e+L +Q+++++ +++ l++  ++++ +++++r  ++R+
  MMETSP1325-20131115|3949_1 152 QTEASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFSKRM 213
                 8899****************************************************999996 PP

>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   4.7     2e-06   0.00093     127     196 ..      53     124 ..      34     126 .. 0.86
   2 !    6.3   4.4     0.009       4.1       6      71 ..     146     211 ..     134     218 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 2e-06
  PF00261.15 127 kdLeraeeraeaaeskiaeLeeelkvvgnnlksLevseek..aseredkyeekiklLtekLkeaetRaeeAE 196
                  d e+a ++++aa ++++  + + +  + +l++L  + ++  + er+  ye+++++L++++k++e+  e+AE
  MMETSP1325-20131115|3949_1  53 LDTEEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRatYEERKAGYEDRVRNLEKQIKNMEANLENAE 124
                 5899******************************877665116789999**********************9 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.009
  PF00261.15   6 leeeldkaeerleeakekleeaekraekaeaEvaslnrriqllEeelerseerleealekLeeaek 71 
                 +++  d++e +l+++ e +e+a++ a+++ +E +  +++i+ + e+l   e+ ++ a + + +++k
  MMETSP1325-20131115|3949_1 146 THQIQDQTEASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFSK 211
                 444556777777778888888888888888888888888888888888888888887777776666 PP

>> PF02601.10  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   5.2   1.4e-05    0.0063     145     269 ..      55     191 ..      17     260 .. 0.56

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.4e-05
  PF02601.10 145 keelkeklknleqrlsralksklekekaklnllknrltlksrrkplskleqeeerleelkerlek..........sleqllqskesqlekln...............aslaknnpdyklnkkl.ekitllkneldsels........saesklrileek 269
                  ee+ +klk+++++++++ k+k +  +++l++l+++++++  +                     +          +le+++++ e++le+ +               +s+ +++++ + +++   ++t+  +e+++e++        ++++++++ +e+
  MMETSP1325-20131115|3949_1  55 TEEASQKLKAAKAQMKTVNKKKTS-FQMELRQLHDQTQRATYE---------------------ErkagyedrvrNLEKQIKNMEANLENAEllggtsdgsqvrndnNSYLAKTHQIQDQTEAsLQNTIEMMENANEVAdetieeleRQKQQINEITEQ 191
                 344445555555555544444322.224444444444333322.....................02222344444455555555555555445555555322222225544444444444444433333333333333354555544344444444443 PP

>> PF02990.11  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   2.6   3.8e-05     0.017      55     218 ..      63     239 ..      45     241 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.8e-05
  PF02990.11  55 kltkeevkllkkaikeeyvvqwliddlpvatkvekveekkvgfesgfslgkk.........................deekiylfnhldleieyhaednddnrivevevkprsvkesscslaeespqelkedeeeleltftYsVkwkese.vkwasRwdkylkaeedaqihwfsiinslvivlfLsglva 218
                 k+ k+++k++    k++  +q+ + +l+  t+  ++ee k+g+e+ +++ +k                         ++++ yl++  +++ + +a+ ++    +e+  + ++v +++ +  e+++q+++e +e+l lt+  ++k+  +   ++++R+      ++d+ i+ f ++n l +v+++++ ++
  MMETSP1325-20131115|3949_1  63 KAAKAQMKTV---NKKKTSFQMELRQLHDQTQRATYEERKAGYEDRVRNLEKqiknmeanlenaellggtsdgsqvrNDNNSYLAKTHQIQDQTEASLQN---TIEMMENANEVADETIEELERQKQQINEITEQL-LTMEDNIKYADQLiRDFSKRM------MTDKCIQIFALMNMLALVVVIVFAIM 239
                 3444444444...4577889*************99*999******9998887899**************9999999878888888888887776644444...47777777799998877778999*****99975.999*******99945677776......57899************999998765 PP

>> PF13864.1  Calmodulin-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   2.5     4e-05     0.018      44      95 ..      67     118 ..      36     120 .. 0.78
   2 ?    1.4   2.7      0.71   3.3e+02      26      64 ..     153     193 ..     134     214 .. 0.55

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4e-05
   PF13864.1  44 ellegLkkkweelnkelqklplvldtlskkrrkeelEkelaeiEedikklsk 95 
                 + ++  +kk+++ + el++l   +++++ ++rk+ +E +++++E++ik ++ 
  MMETSP1325-20131115|3949_1  67 AQMKTVNKKKTSFQMELRQLHDQTQRATYEERKAGYEDRVRNLEKQIKNMEA 118
                 44566777788888888888888999999*******************9875 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.71
   PF13864.1  26 eeqeapkgvrllseeEr..lellegLkkkweelnkelqklp 64 
                  e++ ++ +++++++    +e++e+L+++++++n+  ++l 
  MMETSP1325-20131115|3949_1 153 TEASLQNTIEMMENANEvaDETIEELERQKQQINEITEQLL 193
                 22335556666655543224666666666666665444443 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.7   0.00013     0.058     193     353 ..      19     237 ..       2     239 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00013
   PF04632.7 193 dilaleallsfaafesprlrarvralrallarllall.....allsslarllaalraaaaatppelaalldelaa...alaaeeleaavaaLrarlaalrpeae..........................adsdtaaallarlaellaeladal.aalralqaaiaa........................rrparlarhrdhgaallnglraalailla 353
                  i+  e++ + a ++++  r++++ +  +l++++ l        l ++  +++++++  +  + el++l d++++   ++  +++e++v  L++++++ ++++e                          + +d+ +a l+++ e ++++ ++  +++++l+++ ++                         +++ ++++     al+n+l  +++i++a
  MMETSP1325-20131115|3949_1  19 AITPGEGMTDVAYWDDSY-RGAIDEVDNILSQMAGLDteeasQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRatyEERKAGYEDRVRNLEKQIKNMEANLEnaellggtsdgsqvrndnnsylakthQIQDQTEASLQNTIEMMENANEVAdETIEELERQKQQineiteqlltmednikyadqlirdFSKRMMTDKCIQIFALMNMLALVVVIVFA 237
                 566778888899999988.9999999999999998864444477888888999999999999888*********9999889999************9999999999999999999999999999988888788888888888888888887654156677777766688888888888888888888876555555777777888888888888877776 PP

>> PF02758.11  PAAD/DAPIN/Pyrin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1       1.1   4.9e+02      26      53 ..      55      82 ..      45      95 .. 0.83
   2 ?   13.1   0.7   0.00011      0.05      27      78 ..     180     231 ..     173     234 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 1.1
                S---TTGGG--HHHCCCS-HHHHHHHHH CS
  PF02758.11 26 talekgdlkipwselekadrldladlLv 53
                t++ ++ lk  +++++++++ +++++++
  MMETSP1325-20131115|3949_1 55 TEEASQKLKAAKAQMKTVNKKKTSFQME 82
                6677788888999999999999999997 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00011
                 ---TTGGG--HHHCCCS-HHHHHHHHHHCS-CHHHHHHHHHHHHHTT-TTTH CS
  PF02758.11  27 alekgdlkipwselekadrldladlLvekfpedaAwdvtlkilekinlkdla 78 
                  ++++  +i+++ l + d ++ ad+L+  f+++   d+ ++i+  +n ++l+
  MMETSP1325-20131115|3949_1 180 RQKQQINEITEQLLTMEDNIKYADQLIRDFSKRMMTDKCIQIFALMNMLALV 231
                 4566778899999**********************************99876 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   7.5    0.0048       2.2      36     100 ..      56     122 ..      44     125 .. 0.84
   2 ?   10.2   3.3   0.00081      0.37       7     108 ..     150     252 ..     144     266 .. 0.66

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0048
  PF00769.14  36 eeleeklkqeeeeaqklekkakeleeekerLeeeaaks..ekekeeLekevdeaeaevakleeerek 100
                 ee  +klk ++++++  +kk+  +++e ++L+ ++++   e+ k   e++v+++e +++++e + e+
  MMETSP1325-20131115|3949_1  56 EEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRAtyEERKAGYEDRVRNLEKQIKNMEANLEN 122
                 67889**************************9876544115556779**************988765 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00081
  PF00769.14   7 reelekrleqleeemrkaqkeleeseekaeeleeklkqeeeeaqklekkakeleeekerLeeeaaksekeke....eLekevdeaeaevakleeerekkeaeteql 108
                 +++ e++   l++ +++++++ e + e++eele +++q +e  ++l   +++++ + + ++  + + + +k      L++ ++ + + v+ + +++ + e+e +q 
  MMETSP1325-20131115|3949_1 150 QDQTEAS---LQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFSKRMMTDKCiqifALMNMLALVVVIVFAIMQKNGAFEKEDDQT 252
                 5555555...678888888888889999999999999999999999888888888888887655555444421122455555555555555555555555555555 PP

>> PF01105.19  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.6    0.0041       1.9      82     128 ..      68     121 ..      43     125 .. 0.65
   2 ?    7.9   3.9    0.0045         2      95     174 ..     161     238 ..     134     240 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0041
  PF01105.19  82 sfstksskkvsldievgseakd......ykdsak..kekletleselkkleekld 128
                 +++t ++kk s+++e ++   d      y++ +   ++ + +le+++k++e +l+
  MMETSP1325-20131115|3949_1  68 QMKTVNKKKTSFQMELRQ-LHDqtqratYEERKAgyEDRVRNLEKQIKNMEANLE 121
                 566777799999999963.334222333222222336666666666666666555 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0045
  PF01105.19  95 ievgseakdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqv 174
                 ie+ ++a ++ ++ + e+le  +++++++ e+l  +++++ky  +  + + +    t + + +++++++l+lv+v v+ +
  MMETSP1325-20131115|3949_1 161 IEMMENA-NEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFSKR-MMTDKCIQIFALMNMLALVVVIVFAI 238
                 2222222.233344467777777799999999999999999987766555555.46999999999999999999999876 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   9.5    0.0018      0.84      64     159 ..      55     154 ..      49     163 .. 0.84
   2 ?    5.9   5.5     0.017       7.9     102     166 ..     139     207 ..     129     222 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0018
  PF03962.10  64 kkklkteleklkkeleelkqrikelqaeiekekkkreet..eeree.lleelkeleeelkklkkeleklakldpek.veklkeetevakesanrwtDnif 159
                 +++  ++l+++k++++ +++++ + q e+ +   + + +  eer++   +++++le+++k+++++le+++ l  ++   +++++++++++++++++D+++
  MMETSP1325-20131115|3949_1  55 TEEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRAtyEERKAgYEDRVRNLEKQIKNMEANLENAELLGGTSdGSQVRNDNNSYLAKTHQIQDQTE 154
                 5677899999999999999*9999999999985555555568888878999****************9998876542789999999****9999999976 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.017
  PF03962.10 102 t....eereelleelkeleeelkklkkeleklakldpekveklkeetevakesanrwtDnifllesyls 166
                 +    ++ ++ +++ ++  +++ ++ ++ +++a+ + e++e+ k++++++ e++ +++Dni    + ++
  MMETSP1325-20131115|3949_1 139 NnsylAKTHQIQDQTEASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIR 207
                 333333444555555555555555556666788888888888899999999999999999987655554 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8  20.7      0.09        41       7     124 ..      53     189 ..      48     215 .. 0.72

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.09
   PF12718.2   7 lEaenaqekaeeleeklKeleqenekkEeeiksLqkKnqq..lEeevekleeqlkeakekleekekkkteae................altrriqlLEeeleesekrLketteklre.adkkaeeseRkvkaLEeer 124
                 l++e+a +k++++++++K++++++++   e+++L+ + q   +Ee    +e+ +++ +++ ++ e + ++ae                ++  + ++++++ e s ++  e +e+ +e ad + ee+eR+ +++ e +
  MMETSP1325-20131115|3949_1  53 LDTEEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRatYEERKAGYEDRVRNLEKQIKNMEANLENAEllggtsdgsqvrndnnSYLAKTHQIQDQTEASLQNTIEMMENANEvADETIEELERQKQQINEIT 189
                 79********************************8877652245444445555555555555555555555555555558888888888888999999877776666655555554425666678888888876544 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   3.5     0.086        39      38      98 ..      56     115 ..      46     123 .. 0.83
   2 ?   -1.0   2.9       3.8   1.7e+03      37      76 ..     113     154 ..      89     166 .. 0.55
   3 ?   11.4   7.1   0.00051      0.23      20      95 ..     137     212 ..     129     215 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.086
   PF10046.4  38 keleqkakslekeleklkqkyeelkpylqqideieeqvtkLeeavkeLDeyskeLEsKvks 98 
                 +e +qk+k+ + ++++ ++k+++++ +l q+ + ++q ++ ee     +  + +LE+ +k+
  MMETSP1325-20131115|3949_1  56 EEASQKLKAAKAQMKTVNKKKTSFQMELRQLHD-QTQRATYEERKAGYEDRVRNLEKQIKN 115
                 678899*************************99.777777777777777777777777776 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 3.8
   PF10046.4  37 ykeleqkaks..lekeleklkqkyeelkpylqqideieeqvt 76 
                 +k++e+++++  l   +++ +q  +++++yl++  +i++q +
  MMETSP1325-20131115|3949_1 113 IKNMEANLENaeLLGGTSDGSQVRNDNNSYLAKTHQIQDQTE 154
                 333333332200223334444555666666666666666665 PP

  == domain 3    score: 11.4 bits;  conditional E-value: 0.00051
   PF10046.4  20 aedlklLeklNeataekykeleqkakslekeleklkqkyeelkpylqqideieeqvtkLeeavkeLDeyskeLEsK 95 
                 +++ + L k  + + +  ++l++ ++ +e+  e +++  eel+++ qqi+ei eq+ ++e+ +k+ D+ +   +++
  MMETSP1325-20131115|3949_1 137 NDNNSYLAKTHQIQDQTEASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFSKR 212
                 5566677777778888888999999999999999*******************************99998877666 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1     0.028        13      29      59 ..      45      77 ..      28      94 .. 0.65
   2 ?    5.0   0.0     0.057        26      17      38 ..     103     124 ..     100     135 .. 0.86
   3 ?    3.1   3.4      0.22     1e+02      22      61 ..     156     195 ..     133     208 .. 0.68

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.028
   PF05531.7 29 dvqenlp..dvtelnekLdaqsaqLaeletkve 59
                ++ +++   d++e ++kL a  aq++++++k +
  MMETSP1325-20131115|3949_1 45 NILSQMAglDTEEASQKLKAAKAQMKTVNKKKT 77
                444443322456667777777777777777544 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.057
   PF05531.7  17 ddkVdalqqqvddvqenlpdvt 38 
                 +d+V  l++q++++++nl++ +
  MMETSP1325-20131115|3949_1 103 EDRVRNLEKQIKNMEANLENAE 124
                 689***************9954 PP

  == domain 3    score: 3.1 bits;  conditional E-value: 0.22
   PF05531.7  22 alqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenI 61 
                 +lq+ ++ +++  +  +e  e+L++q +q++e+ +++ + 
  MMETSP1325-20131115|3949_1 156 SLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTM 195
                 4666666555555555677777888888887777765444 PP

>> PF03233.8  Aphid transmission protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   1.7     0.011       4.9      69     139 ..      52     125 ..      42     129 .. 0.65
   2 ?    8.7   3.2    0.0025       1.1      80     152 ..     134     207 ..     124     215 .. 0.68

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.011
   PF03233.8  69 GLekDe.sealsksksPfgsvfkklkkifkeggedkekktk...lletLkeaqnrikkleeetkklaekivtekl 139
                 GL+ +e s++l   k    +  +k k++f+    + +++t+     e     ++r+++le+++k+++ +++  +l
  MMETSP1325-20131115|3949_1  52 GLDTEEaSQKLKAAKAQ-MKTVNKKKTSFQMELRQLHDQTQratYEERKAGYEDRVRNLEKQIKNMEANLENAEL 125
                 67654426777777777.555677788888665544444430003344444566************999998776 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0025
   PF03233.8  80 ksksPfgsvfkklkkifkeggedkekktklletLkeaqn.rikkleeetkklaekivtekllkeevkdlderls 152
                 + ++  +s++ k+++i  +++ + +++ + +e  +e+ +  i++le+++++++e ++    +++++k  d+ ++
  MMETSP1325-20131115|3949_1 134 QVRNDNNSYLAKTHQIQDQTEASLQNTIEMMENANEVADeTIEELERQKQQINEITEQLLTMEDNIKYADQLIR 207
                 44555567777777777777777777777777777776667888888888887777777777777777776665 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   6.4    0.0015      0.68      55     118 ..      56     117 ..      51     126 .. 0.86
   2 ?    5.2   5.7     0.032        15       7      75 ..     134     192 ..     129     217 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0015
   PF07926.7  55 aetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevelselekkieeln 118
                  e++q+L+++k++++ ++k+ ++++ e+ + +++   +++  ee+k+ +e+ +++lek+i++++
  MMETSP1325-20131115|3949_1  56 EEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQT--QRATYEERKAGYEDRVRNLEKQIKNME 117
                 57899999999999999999999999999888875..67789*****************99765 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.032
   PF07926.7   7 slkeelkrlesqiaaieeqiqklkdDlenqaeiareaqdkYerelikhaetiqeLtklkkelaelqkea 75 
                 +++++++++  ++ +i++q ++  ++  ++ e+a+e  d+  +el ++++ i+e+t+          ++
  MMETSP1325-20131115|3949_1 134 QVRNDNNSYLAKTHQIQDQTEASLQNTIEMMENANEVADETIEELERQKQQINEITE----------QL 192
                 566666777777777777666666666666666666666666666666666666654..........33 PP

>> PF10359.4  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   1.6       0.4   1.8e+02     194     234 ..      54      94 ..      37     103 .. 0.58
   2 ?   12.8   6.7   5.7e-05     0.026     169     260 ..     103     204 ..      98     218 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.4
   PF10359.4 194 ddeelqkdleelekelselkerleflekeleelekeeeese 234
                 d+ee  ++l++ + ++++++++    + el++l+++++++ 
  MMETSP1325-20131115|3949_1  54 DTEEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRAT 94 
                 44555566666666666666666666666666666665544 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 5.7e-05
   PF10359.4 169 eeRlkeleeqikkleeklkelel...nkddeelqkdleelekelselkerle.flekeleelekeeeeseksssskkessekesesslses........aseae 260
                 e+R ++le+qik++e +l+++el   ++d++++++d +++  ++++++++ e  l++++e +e+++e+++++ ++ ++++++ +e    e+        + +++
  MMETSP1325-20131115|3949_1 103 EDRVRNLEKQIKNMEANLENAELlggTSDGSQVRNDNNSYLAKTHQIQDQTEaSLQNTIEMMENANEVADETIEELERQKQQINEI--TEQlltmedniKYADQ 204
                 89************************888888888888888888888877762588888888888877777666554444444333..3331233333344444 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   2.4     0.065        30      71     102 ..      55      86 ..      43      93 .. 0.76
   2 ?   12.1   0.8   0.00024      0.11      65      95 ..      93     123 ..      87     125 .. 0.89
   3 ?    3.4   4.5      0.13        58      59      94 ..     156     191 ..     147     199 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.065
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC- CS
  PF01920.15  71 ketlekeiktlekqleklekeleelkeelykk 102
                  e++++++k+ + q+++++k+ ++++ el+++
  MMETSP1325-20131115|3949_1  55 TEEASQKLKAAKAQMKTVNKKKTSFQMELRQL 86 
                 57777888888888888888888888888775 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00024
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  65 eeLeerketlekeiktlekqleklekeleel 95 
                 ++ eerk+ +e ++++lekq++++e++le+ 
  MMETSP1325-20131115|3949_1  93 ATYEERKAGYEDRVRNLEKQIKNMEANLENA 123
                 6779***********************9986 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.13
                 EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  59 dkeevkeeLeerketlekeiktlekqleklekelee 94 
                 ++++++e+ e+  e +++ i++le+q++++++  e+
  MMETSP1325-20131115|3949_1 156 SLQNTIEMMENANEVADETIEELERQKQQINEITEQ 191
                 667788888888888888888888888888775555 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   4.6     0.016       7.2      49     106 ..      60     123 ..      48     127 .. 0.77
   2 ?    8.0   3.0    0.0045       2.1      57     120 ..     145     206 ..     133     207 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.016
   PF14235.1  49 ikqtlaelaaelleleaks......aaelkkkiekykkekkrikseakeleakakeaeeesdea 106
                 +k + a+++ ++++++++s      + + +++ + y+++k+ ++ + ++le++ k++e++ ++a
  MMETSP1325-20131115|3949_1  60 QKLKAAKAQMKTVNKKKTSfqmelrQLHDQTQRATYEERKAGYEDRVRNLEKQIKNMEANLENA 123
                 4555555555555555544777777888889999999999999999999999999999887765 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0045
   PF14235.1  57 aaelleleaksaaelkkkiekykkekkrikseakeleakakeaeeesdealhkhhrfalAeall 120
                 ++++++ +  ++a+l+++ie +++ ++  ++  +ele++ ++++e  +++l  +++ ++A+ l+
  MMETSP1325-20131115|3949_1 145 KTHQIQDQ--TEASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLI 206
                 33333333..499**********************************************99876 PP

>> PF04325.8  Protein of unknown function (DUF465)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.4      0.62   2.8e+02      27      41 ..      57      81 ..      41      89 .. 0.71
   2 ?    5.9   0.1      0.02       9.2       9      24 ..     107     122 ..     102     126 .. 0.83
   3 ?    7.4   0.9    0.0069       3.1      11      39 ..     157     185 ..     147     198 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.62
   PF04325.8 27 ltiqrLKkeKLeLK..........D 41
                ++ q+LK+ K + K           
  MMETSP1325-20131115|3949_1 57 EASQKLKAAKAQMKtvnkkktsfqM 81
                55699*****999955555555554 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.02
   PF04325.8   9 eeLDkeIkaleanpvn 24 
                 ++L+k+Ik++ean +n
  MMETSP1325-20131115|3949_1 107 RNLEKQIKNMEANLEN 122
                 78**********9775 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0069
   PF04325.8  11 LDkeIkaleanpvnddltiqrLKkeKLeL 39 
                 L   I+ +e+++++ d+ti++L ++K ++
  MMETSP1325-20131115|3949_1 157 LQNTIEMMENANEVADETIEELERQKQQI 185
                 5667999***************9999665 PP

>> PF08651.5  DASH complex subunit Duo1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1      0.18        80      19      40 ..      57      78 ..      40      90 .. 0.82
   2 ?    4.2   0.5     0.064        29       9      56 ..     105     154 ..     103     158 .. 0.89
   3 ?    7.4   2.3     0.006       2.8       2      38 ..     156     192 ..     155     210 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.18
   PF08651.5 19 nlieslkaakgniekvqetvks 40
                +  ++lkaak ++++v+++ +s
  MMETSP1325-20131115|3949_1 57 EASQKLKAAKAQMKTVNKKKTS 78
                556899**********987665 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.064
   PF08651.5   9 qLrkinevienlieslkaak..gniekvqetvkstntlLdtWirIlsQte 56 
                  +r++ + i+n++++l++a+  g  +  +++ +  n+ L +  +I+ Qte
  MMETSP1325-20131115|3949_1 105 RVRNLEKQIKNMEANLENAEllGGTSDGSQVRNDNNSYLAKTHQIQDQTE 154
                 58999999**********99888899999999999999999999999998 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.006
   PF08651.5   2 aLlkeleqLrkinevienlieslkaakgniekvqetv 38 
                 +L+   e +++ nev  ++ie l++ k++i+++ e+ 
  MMETSP1325-20131115|3949_1 156 SLQNTIEMMENANEVADETIEELERQKQQINEITEQL 192
                 89999999***********************999875 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   4.4     0.075        34      14      77 ..      57     122 ..      36     137 .. 0.54
   2 ?    9.6   1.1    0.0015      0.68       3      54 ..     162     213 ..     160     218 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.075
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXX CS
   PF06009.7  14 eVlkelegistnventkaklsklngsveetnekvksankavrda..rrsvrkleklapqlldkLkk 77 
                 e  ++l++ +++++ + +k  +++ ++++ +++ + a+   r a  ++ vr+lek++  + + L++
  MMETSP1325-20131115|3949_1  57 EASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRATYEERKAgyEDRVRNLEKQIKNMEANLEN 122
                 333333444444444444444444444555555555555555542235666666666666666665 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0015
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7   3 elakeAnetakeVlkelegistnventkaklsklngsveetnekvksankav 54 
                 e++++Ane a e+ +ele  +++++++ ++l +++++++  ++++++++k +
  MMETSP1325-20131115|3949_1 162 EMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFSKRM 213
                 68899**********************************9999999999865 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   6.4      0.11        50      26      93 ..      57     123 ..      37     125 .. 0.66
   2 ?    9.5   3.2    0.0018      0.84      53      99 ..     155     201 ..     133     210 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  26 edvdelleldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkel 93 
                 e  ++l ++ +++++++++  ++q e  +l  + ++a  + e ++   ++v++l +++k++ea+l+++
  MMETSP1325-20131115|3949_1  57 EASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRATYE-ERKAGYEDRVRNLEKQIKNMEANLENA 123
                 4555566666666666666666666666666666666554.566777778888888888888877765 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.0018
                 HHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  53 NelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelek 99 
                  +l+++I+ + +++e a+e i+e +  k+++++++++l ++e++++ 
  MMETSP1325-20131115|3949_1 155 ASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTMEDNIKY 201
                 4678899999999999*******************999999998875 PP

>> PF10173.4  Mitochondrial K+-H+ exchange-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.7       1.1   4.8e+02      26      63 ..      68     106 ..      47     124 .. 0.51
   2 ?   10.1   0.3    0.0011      0.48      15      89 ..     142     214 ..     133     248 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 1.1
   PF10173.4  26 eslskeskkesledkitkkaakt.waklekaekgwkkkv 63 
                 ++++ ++kk+s++ ++ +   +t +a+ e+ + g+  +v
  MMETSP1325-20131115|3949_1  68 QMKTVNKKKTSFQMELRQLHDQTqRATYEERKAGYEDRV 106
                 344444444444444444444442333333333444444 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.0011
   PF10173.4  15 yckksesssaeeslskeskkesledkitkkaaktwaklekaekgwkkkvvslgeklldripyeEnaLksipsesk 89 
                 y  k+++ ++ +++++ +++ ++ + + + a +t ++le++++++ +++++ +  + d+i+y  + ++ ++++  
  MMETSP1325-20131115|3949_1 142 YLAKTHQIQD-QTEASLQNTIEMMENANEVADETIEELERQKQQI-NEITEQLLTMEDNIKYADQLIRDFSKRMM 214
                 6667766655.788888899999999******************9.678889999************99988765 PP

>> PF05190.13  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.1   0.00047      0.21       9      90 ..      39     124 ..      32     126 .. 0.80
   2 ?   -0.0   0.5         2     9e+02       4      22 ..     176     194 ..     162     203 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00047
                 HHHHHHHHHHHHHHHHCCCCC.H---..TTSEEE--S----EEEE-TTSTTTT..SEEEEE-.----EEEECCCHHHHHHHHHHHH CS
  PF05190.13   9 lrrkleeleselkellekere.rlgi..kslkvgynkklgyylevtrseakkvpkdfirlqt.lknserfttpelkkleaelleae 90 
                 + ++ +++ s+++ l  +e+  +l+   +++k+ + kk  +++e+ + ++++ ++ +++++    + +r   +++k++ea+l++ae
  MMETSP1325-20131115|3949_1  39 AIDEVDNILSQMAGLDTEEASqKLKAakAQMKTVNKKKTSFQMELRQLHDQTQRATYEERKAgYEDRVRNLEKQIKNMEANLENAE 124
                 55666777777777766666556666669********************999999999866559999***************9998 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 2
                 HHHHHHHHHHHHHHHHHHH CS
  PF05190.13   4 eeLdelrrkleeleselke 22 
                 eeL   +++++e++++l  
  MMETSP1325-20131115|3949_1 176 EELERQKQQINEITEQLLT 194
                 3444444444444444444 PP

>> PF04508.7  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1      0.27   1.2e+02       9      17 ..     105     113 ..     104     117 .. 0.87
   2 ?    6.0   1.2     0.023        10       1      17 [.     176     192 ..     176     198 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.27
   PF04508.7   9 kIsdLekqL 17 
                 ++++Lekq+
  MMETSP1325-20131115|3949_1 105 RVRNLEKQI 113
                 89******7 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.023
   PF04508.7   1 rEldrlRrkIsdLekqL 17 
                 +El+r++++I++  +qL
  MMETSP1325-20131115|3949_1 176 EELERQKQQINEITEQL 192
                 8**********988888 PP

>> PF09969.4  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.8     0.014       6.6       4      67 ..      54     117 ..      51     128 .. 0.84
   2 ?    5.6   2.3     0.034        15      24      84 ..     152     210 ..     133     221 .. 0.55

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.014
   PF09969.4   4 tleeAnellpeieelleevkelkaeleeleealeeaekeleaeelkeeleeleeqiraaieeie 67 
                 ++eeA + l+  ++++++v+++k++++   ++l+++++++++ee+k+ +e   ++++++i+++e
  MMETSP1325-20131115|3949_1  54 DTEEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRATYEERKAGYEDRVRNLEKQIKNME 117
                 67999**************999999998889999999999888888888888888888887765 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.034
   PF09969.4  24 elkaeleeleealeeaekeleaeelkeeleeleeqiraaieeieelGvevkdldegLvDFp 84 
                 +++a+l+++ e +e+a +e  a e+ eele  ++qi+++ e++  +   +k +d+++ DF 
  MMETSP1325-20131115|3949_1 152 QTEASLQNTIEMMENA-NE-VADETIEELERQKQQINEITEQLLTMEDNIKYADQLIRDFS 210
                 2222222222222222.22.23445566677777777777777777777777777777774 PP

>> PF09278.6  MerR, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.2       2.4   1.1e+03      18      51 ..      41      75 ..      39      88 .. 0.59
   2 ?    5.4   0.5     0.046        21      24      58 ..      84     119 ..      80     122 .. 0.85
   3 ?    7.0   1.7     0.015         7      36      64 ..     166     194 ..     143     195 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 2.4
                CCHHHHHHHHHS.CC-BHHHHHHHHHHHHHHHHHH CS
   PF09278.6 18 dEIrelLalydd.parpcadvrallaeklaeleeq 51
                dE+  +L+  ++ ++++++++ + ++++++ ++++
  MMETSP1325-20131115|3949_1 41 DEVDNILSQMAGlDTEEASQKLKAAKAQMKTVNKK 75
                66666774433435555555555777777777766 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.046
                 HHHHHS.CC-BHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF09278.6  24 Lalydd.parpcadvrallaeklaeleeqiaeLqal 58 
                  +l d+ ++++ ++++a  ++++  le+qi+ ++a 
  MMETSP1325-20131115|3949_1  84 RQLHDQtQRATYEERKAGYEDRVRNLEKQIKNMEAN 119
                 4667887899999999***************99986 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.015
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF09278.6  36 dvrallaeklaeleeqiaeLqalraeLea 64 
                  ++++++e ++ele+q +++ ++ ++L +
  MMETSP1325-20131115|3949_1 166 NANEVADETIEELERQKQQINEITEQLLT 194
                 56799******************999975 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   1.5      0.94   4.3e+02      62      79 ..      69      86 ..      34     119 .. 0.41
   2 ?    8.4   5.2    0.0053       2.4       9      97 .]     108     196 ..      95     196 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.94
   PF09177.6 62 vsvveknpekfglseeei 79
                +++v+k++++f+++ +++
  MMETSP1325-20131115|3949_1 69 MKTVNKKKTSFQMELRQL 86
                222222222222221111 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0053
   PF09177.6   9 evqksidkleslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrRkqfvaeireeikevk 97 
                 +++k+i+++e  +++ e l  +s+ s+  +  ++ L ++ +   ++   L++++++ e+ +e    + ee++r kq ++ei e++  ++
  MMETSP1325-20131115|3949_1 108 NLEKQIKNMEANLENAELLGGTSDGSQVRNDNNSYLAKTHQIQDQTEASLQNTIEMMENANEVADETIEELERQKQQINEITEQLLTME 196
                 4677888888888888777777776666666677776666555555668**************9********************98875 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   5.2    0.0041       1.9      81     144 ..      55     118 ..      41     125 .. 0.66
   2 ?    4.9   7.2     0.033        15      73     155 ..      82     169 ..      79     181 .. 0.67
   3 ?    2.1   6.9      0.24   1.1e+02      62     130 ..     145     211 ..     120     223 .. 0.54

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0041
   PF07106.8  81 ieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtk 144
                  ee +++++++k ++++++k++ + + el + + +++ +++++  + +e+++++l++++k++++
  MMETSP1325-20131115|3949_1  55 TEEASQKLKAAKAQMKTVNKKKTSFQMELRQLHDQTQRATYEERKAGYEDRVRNLEKQIKNMEA 118
                 5666777777777777777777777777754444555556666667777777777777777554 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.033
   PF07106.8  73 elnkldaeiee..lreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeanke...vtkeeiekvkkeyk 155
                 el++l ++ ++  ++e +   ++ +++lek++k+++++l+++ell   +   +  +++++ L + ++  ++     ++ ie +++ ++
  MMETSP1325-20131115|3949_1  82 ELRQLHDQTQRatYEERKAGYEDRVRNLEKQIKNMEANLENAELLGGTSDGSQVRNDNNSYLAKTHQIQDQteaSLQNTIEMMENANE 169
                 77888887554116777777899*********************98887776666666666666555544411144444444444444 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.24
   PF07106.8  62 nqdqlellsdeelnkldaeieelreevqelkqeiselekelkkLtseltt.eelleeiqelkkeveeiee 130
                 +  q++   d++++ l++ ie +++ ++ + ++i+ele +++++++  ++   + ++i+  ++ +++ ++
  MMETSP1325-20131115|3949_1 145 KTHQIQ---DQTEASLQNTIEMMENANEVADETIEELERQKQQINEITEQlLTMEDNIKYADQLIRDFSK 211
                 333333...4455555555555555555555555555555544443322102344444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3061  (0.223888); expected 273.4 (0.02)
Passed bias filter:                      929  (0.0679491); expected 273.4 (0.02)
Passed Vit filter:                       144  (0.0105325); expected 13.7 (0.001)
Passed Fwd filter:                        57  (0.0041691); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 1.28u 0.41s 00:00:01.69 Elapsed: 00:00:00.71
# Mc/sec: 904.54
//
Query:       MMETSP1325-20131115|3955_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-08   32.4   0.0    3.3e-08   32.2   0.0    1.1  1  PF01039.17 Carboxyl transferase domain


Domain annotation for each model (and alignments):
>> PF01039.17  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   2.4e-12   3.3e-08       2      56 ..      44      97 ..      43      98 .] 0.94

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 2.4e-12
                CCH---EECCCCHHCCSTTT-.---CHHHHHHHHHHHHHC--TCEEEEE------- CS
  PF01039.17  2 ehprGkltareridllldpgs.FgeledlafhrvtelglkrlprdgvvtgsGaviG 56
                + +rGkl++r+rid l+dpg+ F e ++la h+++ ++  ++p+ gvvtg+G + G
  MMETSP1325-20131115|3955_1 44 HMARGKLLPRQRIDGLIDPGTpFLEFSPLAGHEMYGKD--KVPAGGVVTGIGCIAG 97
                789*****************************999998..48***********999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.48s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|3954_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.42s 00:00:00.69 Elapsed: 00:00:00.57
# Mc/sec: 169.40
//
Query:       MMETSP1325-20131115|3956_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.089   12.2  10.3        0.3   10.5   1.4    2.1  2  PF00558.14 Vpu protein
       0.33   10.0  12.7       0.39    9.7   8.8    1.0  1  PF08619.5  Alkali metal cation/H+ antiporter Nha1 C terminus
        2.8    6.5   7.5        3.3    6.3   5.2    1.0  1  PF01698.11 Floricaula / Leafy protein
        5.4    7.5  14.1       0.41   11.1   4.1    2.1  2  PF08555.5  Eukaryotic family of unknown function (DUF1754)
        9.9    6.3   9.3       0.85    9.8   2.6    1.8  2  PF03726.9  Polyribonucleotide nucleotidyltransferase, RNA binding domain


Domain annotation for each model (and alignments):
>> PF00558.14  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.4   0.00011       0.3      30      65 ..       3      41 ..       1      47 [. 0.76
   2 ?    6.9   0.9    0.0015         4      29      60 ..      58      90 ..      53      96 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00011
  PF00558.14 30 ykkikkqkeier...likrireraedSgnESdGeeeeel 65
                y  +k + e+++   l++++   + dS++ Sd+eeeeel
  MMETSP1325-20131115|3956_1  3 YEAHKDDLELDNeasLFEQVLTANQDSDESSDEEEEEEL 41
                5566666555433338999999**************987 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0015
  PF00558.14 29 eykkikkqkeierlikrirer.aedSgnESdGe 60
                e  k+k+qk++    k++ e   e S++E +Ge
  MMETSP1325-20131115|3956_1 58 EAEKRKRQKRLAGSKKQVVEEdDETSDEEEEGE 90
                567899999999888877655166787777776 PP

>> PF08619.5  Alkali metal cation/H+ antiporter Nha1 C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   8.8   0.00014      0.39     317     402 ..       6      87 ..       2      98 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00014
   PF08619.5 317 pkarkevveesdapervkaaardesddedeselkdskseekleeelaseedksaaeerrksreksssssesrsesredsededtee 402
                  k++ e+++e +  e+v++a++d+++++de+e+++  ++ k++e++a ++  ++ae+r+++++    + ++++  +ed+e++d+ee
  MMETSP1325-20131115|3956_1   6 HKDDLELDNEASLFEQVLTANQDSDESSDEEEEEELVVAPKEAEDAA-SAGLTEAEKRKRQKRL---AGSKKQVVEEDDETSDEEE 87 
                 577889999***************88888888888888888888877.6677776666663333...3333333333333333222 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.2    0.0012       3.3     151     218 ..      19      90 ..       3      98 .. 0.36

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0012
  PF01698.11 151 eepvqe.ekeaagsggeglgeaelvaaeekkseeekkkaskk..kqkrkkkkelkse..ededeeeeededee 218
                  e+v + ++++  s++e+ +e elv+a+++ +++ +   +++  ++++k+   +k++  e++de+++e+e++e
  MMETSP1325-20131115|3956_1  19 FEQVLTaNQDSDESSDEE-EEEELVVAPKEAEDAASAGLTEAekRKRQKRLAGSKKQvvEEDDETSDEEEEGE 90 
                 333333133333333333.455555555444433333332221022222222222222233333333333333 PP

>> PF08555.5  Eukaryotic family of unknown function (DUF1754)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   4.1   0.00015      0.41      48      86 ..      25      62 ..       3      69 .. 0.70
   2 ?    1.3   1.9      0.18   4.9e+02      30      46 ..      72      88 ..      61      98 .. 0.35

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00015
   PF08555.5 48 sskesdaesekdkeeeekeseekkekeeeqenlTeAEra 86
                 +++sd es++++eeee  ++ k+ ++++  +lTeAE++
  MMETSP1325-20131115|3956_1 25 ANQDSD-ESSDEEEEEELVVAPKEAEDAASAGLTEAEKR 62
                233333.677788889999999999999*********97 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.18
   PF08555.5 30 kkskekkekekekeeee 46
                kk+ +++++e++ eeee
  MMETSP1325-20131115|3956_1 72 KKQVVEEDDETSDEEEE 88
                22222222222222222 PP

>> PF03726.9  Polyribonucleotide nucleotidyltransferase, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.3      0.47   1.3e+03      35      55 ..      20      40 ..      11      47 .. 0.64
   2 ?    9.8   2.6   0.00031      0.85       8      51 ..      46      89 ..      40      96 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.47
   PF03726.9 35 akvveafaaeleeedeedeke 55
                ++v++a +++ e  dee+e+e
  MMETSP1325-20131115|3956_1 20 EQVLTANQDSDESSDEEEEEE 40
                556666665555555666555 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00031
   PF03726.9  8 elaeeelsealtiteKqeRyaaldeikakvveafaaeleeedee 51
                ++ae++ s+ lt  eK +R+++l   k++vve+  ++ +ee+e 
  MMETSP1325-20131115|3956_1 46 KEAEDAASAGLTEAEKRKRQKRLAGSKKQVVEEDDETSDEEEEG 89
                5688889999**********************999666555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1213  (0.0887215); expected 273.4 (0.02)
Passed bias filter:                      685  (0.0501024); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.42s 00:00:00.92 Elapsed: 00:00:00.97
# Mc/sec: 247.05
//
Query:       MMETSP1325-20131115|3959_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 668.46
//
Query:       MMETSP1325-20131115|3957_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 1090.11
//
Query:       MMETSP1325-20131115|3961_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|3962_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 582.64
//
Query:       MMETSP1325-20131115|3965_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0001   21.7   0.7    0.00011   21.7   0.5    1.1  1  PF00038.16 Intermediate filament protein
     0.0043   16.5   1.2     0.0049   16.3   0.8    1.1  1  PF01813.12 ATP synthase subunit D
     0.0079   15.5   1.0      0.012   14.9   0.4    1.5  1  PF04977.10 Septum formation initiator
  ------ inclusion threshold ------
      0.016   14.8   3.0      0.023   14.3   1.1    1.7  2  PF01920.15 Prefoldin subunit
      0.023   14.0   1.6      0.026   13.8   1.1    1.0  1  PF06810.6  Phage minor structural protein GP20
      0.023   14.4   3.0      0.026   14.2   2.1    1.1  1  PF10211.4  Axonemal dynein light chain
       0.03   13.4   2.1      0.036   13.1   1.4    1.1  1  PF13851.1  Growth-arrest specific micro-tubule binding
      0.063   13.0   1.7      0.077   12.8   1.2    1.2  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein
      0.067   11.7   4.7      0.077   11.5   3.3    1.1  1  PF09731.4  Mitochondrial inner membrane protein
      0.096   12.3   5.4       0.14   11.7   3.7    1.2  1  PF07926.7  TPR/MLP1/MLP2-like protein
       0.16   11.8   2.6        0.2   11.5   1.8    1.3  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.22   10.9   5.9       0.25   10.8   4.1    1.1  1  PF00769.14 Ezrin/radixin/moesin family
       0.25   10.7   2.3       0.28   10.6   1.6    1.1  1  PF01025.14 GrpE
       0.28   10.7   1.7       0.34   10.4   1.2    1.1  1  PF08286.6  Spc24 subunit of Ndc80
       0.59    9.5   4.0       0.63    9.4   2.8    1.1  1  PF04156.9  IncA protein
       0.94    9.3   7.7        1.9    8.2   0.9    2.1  2  PF08826.5  DMPK coiled coil domain like
        1.2    8.9   6.4        1.4    8.7   4.4    1.1  1  PF03938.9  Outer membrane protein (OmpH-like)
          6    6.5   8.0         81    2.9   5.6    2.6  1  PF02183.13 Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.5   1.4e-07   0.00011      85     147 ..       2      61 ..       1      77 [. 0.82

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 1.4e-07
  PF00038.16  85 edlrekyekelnkresaEaelaklrkdldeatlarvdleakveslkeeleflkklheeEvkel 147
                 + lr+++++ + ++ s+E+e  kl++++de+ +a+ +lea +e+   ++++ k+  e+ ++ +
  MMETSP1325-20131115|3965_1   2 DALRKQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMEA---QIRMHKQALEAALNSV 61 
                 789************************************98876...6777777777766655 PP

>> PF01813.12  ATP synthase subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.8   6.4e-06    0.0049       5      61 ..       3      59 ..       2      76 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 6.4e-06
  PF01813.12  5 rlkrrlklaqrghslLkkKrdaLilefrellkelkelreeleealkeayfslalaqa 61
                +l+++lk++q   s L++ rd L +++ el +   el+  +e++++   ++l+ a  
  MMETSP1325-20131115|3965_1  3 ALRKQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMEAQIRMHKQALEAALN 59
                69*******************************************999999888765 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.4   1.6e-05     0.012      12      46 ..       8      42 ..       6      48 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.6e-05
  PF04977.10 12 gksgllalyqlkqeiaalqaelaklkaeneeLeae 46
                +k ++ ++++l++e ++l+a++++l a ++eLea 
  MMETSP1325-20131115|3965_1  8 LKTSQGRCSSLEEERDKLKAKMDELAAAQAELEAS 42
                788999**************************986 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.1     3e-05     0.023       5      41 ..       6      42 ..       2      48 .. 0.88
   2 ?    1.0   0.1      0.41   3.1e+02      23      36 ..      42      55 ..      38      62 .. 0.59

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3e-05
                --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTS CS
  PF01920.15  5 nkfqqlqqqlqklaqqikqletqlkeielvleelell 41
                ++++++q +++ l++++++l+++++e+  ++ ele  
  MMETSP1325-20131115|3965_1  6 KQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEAS 42
                789999***************************9965 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.41
                HHHHHHHHHHHHHH CS
  PF01920.15 23 qletqlkeielvle 36
                ++e+q++ ++++le
  MMETSP1325-20131115|3965_1 42 SMEAQIRMHKQALE 55
                45555555555554 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.1   3.4e-05     0.026      30      92 ..       2      59 ..       1      65 [. 0.78

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.4e-05
   PF06810.6 30 dslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkkeeyeaklkdlklnnaielalk 92
                d+l++qlk+     ++L++   + ++Lk+k+++l ++ ++ ++++ea++     ++a+e al+
  MMETSP1325-20131115|3965_1  2 DALRKQLKTSQGRCSSLEE---ERDKLKAKMDELAAAQAELEASMEAQIRM--HKQALEAALN 59
                8999*************99...8899********99999777766666543..3455555554 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.1   3.4e-05     0.026     111     160 ..       3      53 ..       1      62 [. 0.69

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.4e-05
   PF10211.4 111 glrkaleaeqgk.selekeikkleeekeeLekevkelekkleeiekreeee 160
                 +lrk+l+++qg+ s le+e  kl+ ++ eL+  ++ele+ +e+  +  ++ 
  MMETSP1325-20131115|3965_1   3 ALRKQLKTSQGRcSSLEEERDKLKAKMDELAAAQAELEASMEAQIRMHKQA 53 
                 567888777765367777778888888888888888887777766655554 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.4   4.7e-05     0.036      91     142 ..       4      55 ..       2      63 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.7e-05
   PF13851.1  91 lkaklkelekelknlkwesevleqrfekverErdelykkfeaaiqdvqqkte 142
                 l+++lk+++   ++l+ e + l+ +++++     el++  ea i+ ++q  e
  MMETSP1325-20131115|3965_1   4 LRKQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMEAQIRMHKQALE 55 
                 78999999999*******************************9999999766 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.2    0.0001     0.077      55      92 ..      16      53 ..       2      65 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 0.0001
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-- CS
   PF07200.8 55 pqleelkaqlqdkleelkkleekyeekkqkldelssky 92
                ++lee++++l++k++el++++ ++e++++ + +  ++ 
  MMETSP1325-20131115|3965_1 16 SSLEEERDKLKAKMDELAAAQAELEASMEAQIRMHKQA 53
                789*********************99998776655544 PP

>> PF09731.4  Mitochondrial inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.3    0.0001     0.077     295     353 ..       5      64 ..       1      67 [. 0.69

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.0001
   PF09731.4 295 eeelskeleekea.kleeklrqefekekeelrekyeeeLrteLkrqaealeqklknelal 353
                 +++l+ +     + ++e++  +    e ++ ++++e++++++++ +++ale++l+ +++l
  MMETSP1325-20131115|3965_1   5 RKQLKTSQGRCSSlEEERDKLKAKMDELAAAQAELEASMEAQIRMHKQALEAALNSVVRL 64 
                 45555444444444444444444445667778999999999999**********999986 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   3.7   0.00019      0.14      59     108 ..       6      55 ..       2      63 .. 0.48

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00019
   PF07926.7  59 qeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevels 108
                 ++L++ +  +++l++e ++l++++d+  a   ele+++e + +m +++l+
  MMETSP1325-20131115|3965_1   6 KQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMEAQIRMHKQALE 55 
                 34444444455555555555555555555555555555555444444433 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.8   0.00026       0.2      63      99 ..       9      45 ..       1      63 [. 0.51

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00026
                TT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17 63 kkkkedaeeliaevkelkeelkaleaelkeleaelek 99
                k ++   ++l +e ++lk+++++l a+ +elea +e+
  MMETSP1325-20131115|3965_1  9 KTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMEA 45
                3333344444444444444444444444444444443 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   4.1   0.00033      0.25      25      71 ..       5      52 ..       1      64 [. 0.59

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00033
  PF00769.14 25 qkeleeseekaeeleeklkqeeeeaqklekkakeleeek.erLeeeaa 71
                +k+l+ s+ +  +lee++ + ++++++l+++++ele+ + ++++++++
  MMETSP1325-20131115|3965_1  5 RKQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMeAQIRMHKQ 52
                456666666666666666666666666666666666544134444444 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.6   0.00037      0.28      12      63 ..       6      60 ..       1      67 [. 0.54

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00037
  PF01025.14 12 deeeeleeeleeleeevkelkdkllrllaefenlrkrt...ekekeeakkyaiek 63
                ++ ++++ ++ +leee ++lk k+ +l+a   +l+  +    +  ++a + a ++
  MMETSP1325-20131115|3965_1  6 KQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMeaqIRMHKQALEAALNS 60
                5666677777778887777777766555555554444400034444444444444 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.2   0.00045      0.34      11      57 ..       4      50 ..       3      64 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00045
   PF08286.6 11 lakelndleselenlqseleelkeeleeleeqenegkeedeeeaeee 57
                l k+l+  + + ++l++e ++lk++++el   + e +++ e++ +  
  MMETSP1325-20131115|3965_1  4 LRKQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMEAQIRMH 50
                56888899999999999999999999999999999555555554433 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.8   0.00083      0.63     121     170 ..       4      49 ..       1      65 [. 0.52

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00083
   PF04156.9 121 lqeelksleerlesleesikelakeirelreeisdlkeevqelrselerl 170
                 l+++lk  + r+ slee+ ++l +++ el      +++e++   +++ r+
  MMETSP1325-20131115|3965_1   4 LRKQLKTSQGRCSSLEEERDKLKAKMDELA----AAQAELEASMEAQIRM 49 
                 556666666666666666666666666666....3333333333333333 PP

>> PF08826.5  DMPK coiled coil domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.9    0.0026       1.9      32      60 ..       6      34 ..       3      35 .. 0.91
   2 ?    4.8   0.4      0.03        22       1      23 [.      38      61 ..      38      64 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0026
   PF08826.5 32 skLkeaEkknreLeeeleqLkkemEelra 60
                 +Lk +  +   Leee ++Lk +m+el a
  MMETSP1325-20131115|3965_1  6 KQLKTSQGRCSSLEEERDKLKAKMDELAA 34
                69***********************9966 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.03
   PF08826.5  1 eLQsALeaEira.kQslqeeLekv 23
                eL   +ea ir  kQ+l+  L+ v
  MMETSP1325-20131115|3965_1 38 ELEASMEAQIRMhKQALEAALNSV 61
                678889****9559****999987 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   4.4    0.0018       1.4      37      92 ..       3      58 ..       1      63 [. 0.68

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0018
   PF03938.9 37 lqaklqeeakekqqelqakkkelqkeqknlqseraqlsaeaekakeeelqakeqel 92
                + +k+ ++++   + l++++++l+++ ++l + +a l a+ e++ ++  qa e++l
  MMETSP1325-20131115|3965_1  3 ALRKQLKTSQGRCSSLEEERDKLKAKMDELAAAQAELEASMEAQIRMHKQALEAAL 58
                55666666677777788888888888888888777666666666666666666655 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   5.6      0.11        81      14      37 ..      15      38 ..       2      59 .. 0.71

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.11
  PF02183.13 14 ydaLkaendsLqkEkekLraevls 37
                + +L +e d+L++  ++L a  ++
  MMETSP1325-20131115|3965_1 15 CSSLEEERDKLKAKMDELAAAQAE 38
                555555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1499  (0.10964); expected 273.4 (0.02)
Passed bias filter:                     1196  (0.0874781); expected 273.4 (0.02)
Passed Vit filter:                       201  (0.0147016); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.47u 0.49s 00:00:00.96 Elapsed: 00:00:00.71
# Mc/sec: 263.26
//
Query:       MMETSP1325-20131115|3964_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.1   0.3      0.047   13.4   0.2    1.2  1  PF06103.6  Bacterial protein of unknown function (DUF948)
      0.042   13.4   0.1      0.082   12.5   0.1    1.5  1  PF07544.8  RNA polymerase II transcription mediator complex subunit 9
       0.05   11.1   0.6      0.059   10.9   0.4    1.1  1  PF01576.14 Myosin tail
      0.053   13.0   0.1      0.087   12.3   0.1    1.3  1  PF06295.7  Protein of unknown function (DUF1043)


Domain annotation for each model (and alignments):
>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   1.4e-05     0.047      25      72 ..      74     121 ..      68     124 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.4e-05
   PF06103.6  25 kktldevnktvkkltkqvdgitketeellaktnelleDvneKvetldp 72 
                 + +++++++ +++++++ d++++e+++  ak  +ll+D+++   +ld+
  MMETSP1325-20131115|3964_1  74 QAAIANLEDHLNSVKTDYDKTLEELKQQHAKGARLLDDFEHVLDQLDN 121
                 56799************************************9999997 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.4e-05     0.082      41      80 ..      74     114 ..      63     117 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.4e-05
   PF07544.8  41 raaveelpd.isrsveeqeaeIeeleeqiarkrevLkklke 80 
                 +aa+++l+d ++  + +  + +eel++q a+  ++L++++ 
  MMETSP1325-20131115|3964_1  74 QAAIANLEDhLNSVKTDYDKTLEELKQQHAKGARLLDDFEH 114
                 589******999999999********************975 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.4   1.7e-05     0.059     650     703 ..      67     120 ..      27     123 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.7e-05
  PF01576.14 650 taqnssliaeKrkLEaelaalqsdldEaanelkaaeerakkaqadaarlaeeLr 703
                 + q+++ +a+   LE  l+ +++d+d +++elk+   +  ++  d +++ ++L 
  MMETSP1325-20131115|3964_1  67 ERQSNAHQAAIANLEDHLNSVKTDYDKTLEELKQQHAKGARLLDDFEHVLDQLD 120
                 3566667778889***************************************96 PP

>> PF06295.7  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   2.5e-05     0.087      20      68 ..      70     118 ..      63     132 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.5e-05
   PF06295.7  20 tkkklkkqkkikkeLeeakaeleeqkkelkdhfaksaelletlakDYkk 68 
                 ++ +    ++++  L+++k+++++  +elk+  ak a ll+ + +   +
  MMETSP1325-20131115|3964_1  70 SNAHQAAIANLEDHLNSVKTDYDKTLEELKQQHAKGARLLDDFEHVLDQ 118
                 555555567999*****************************98776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       864  (0.0631949); expected 273.4 (0.02)
Passed bias filter:                      705  (0.0515652); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 912.66
//
Query:       MMETSP1325-20131115|3963_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00055   19.2   0.1     0.0016   17.7   0.0    1.8  2  PF00850.14 Histone deacetylase domain


Domain annotation for each model (and alignments):
>> PF00850.14  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.2e-07    0.0016     268     305 ..       4      38 ..       1      39 [. 0.84
   2 ?   -1.7   0.0     0.092   1.3e+03      47     228 ..      69      85 ..      61     142 .. 0.56

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.2e-07
                 HHHHHHHHH----EEEB------TTTTTT---HHHHHH CS
  PF00850.14 268 trdllelalakgkvvlvleGGYnlealaraalavlagl 305
                 ++ +++++    +++++++GGY+l++++r++++ +a+l
  MMETSP1325-20131115|3963_1   4 VEFVKSFN---VPTLVLGGGGYTLRNVPRCWTYETAVL 38 
                 45556665...8*********************99998 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.092
                 HHTTS-HHHHHHHHHHH.....HS----------------HHHHHH----HHHHHHHH--------B--S-------TT------SS-HHHHH---TTTT-----EEEEE-SS------TTTTTT-TTEEEEEEEETT..SSST---TT----------EEEEEE------HHHHHHHHHTH CS
  PF00850.14  47 lllvhspeYleqleelasekeeelallglesdtplspgsleaallaagavieavdlvlegevrkafvairppGHHAekdsasGFCllNnvaiaakyllkkhglkrvlivDfDvHhGnGtqeifysdpsvltlSlHdyeeefyPgtgaadevgegkgkgynlniplepgtsdeeylkafekil 228
                 +++  ++eYle+++                                                                                                                                                                       l
  MMETSP1325-20131115|3963_1  69 MENLNTKEYLENVK---------------------------------------------------------------------------------------------------------------------------------------------------------------------VQL 85 
                 55555666666662.....................................................................................................................................................................222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 662.27
//
Query:       MMETSP1325-20131115|3966_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.078   12.8   0.1        0.2   11.6   0.1    1.6  1  PF11373.3 Protein of unknown function (DUF3175)


Domain annotation for each model (and alignments):
>> PF11373.3  Protein of unknown function (DUF3175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.4e-05       0.2      47      75 ..      97     125 ..      70     131 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.4e-05
   PF11373.3  47 frsamsmLnfyinRagknLpkkrretLek 75 
                  +  ms L+ y  R g++Lp++ r++++k
  MMETSP1325-20131115|3966_1  97 AQEGMSSLSHYRERPGQQLPERARKRVQK 125
                 3678******************9999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       623  (0.0455676); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.70
# Mc/sec: 883.23
//
Query:       MMETSP1325-20131115|3967_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 826.98
//
Query:       MMETSP1325-20131115|3971_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   13.5   0.0      0.027   13.4   0.0    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
       0.19   11.4   3.2       0.55    9.9   2.2    1.8  1  PF01599.14 Ribosomal protein S27a


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0     4e-06     0.027      79     174 ..      74     224 ..      37     230 .] 0.88

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4e-06
                 HHHHHHHHHBGGGGGCTTS-HHHHHHHHHHHHHHHHHHHCCHHHHSTTS-....-SCHHHHC-EEEEEEEEETTCEEE.........................................................EEEECCB-SEEEEEEE-E CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................................................xxxxxxxxxxxxxxxxxx RF
  PF00443.24  79 efkktlkkineqfsgykQqDahEfllflLdqlhedlnrlnkkektekqkaedsndslitdlfkgqlksrlkclecknv.........................................................kvklkrlPeiLiihlkRf 174
                 ++++tl + + +f+  +  Da+E+l  +L  +h++   ++ + +  ++       ++   +fk ++ ++ +c++c+ +                                                         +    +lPeiL ++l + 
  MMETSP1325-20131115|3971_1  74 QVLSTLYARAGRFQMGEIDDATEVLEAILTIIHCEYCGIQLEDHGDDKVCT--PRCPACAVFKASFFDQTICNKCRATsdptpndeflyrvyvsealqgprneglqtalkrildsetsgkcpsdgpgqckgttrvSRCCLELPEILAMNLVWA 224
                 4666666667777766889******************98876655444444..689999************************************************************************99887788899******99887 PP

>> PF01599.14  Ribosomal protein S27a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.2   8.1e-05      0.55      19      47 .]     121     149 ..     115     149 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 8.1e-05
  PF01599.14  19 reCpnerCGa.GvFmAehkdRqyCGkCglt 47 
                 + C+ +rC a  vF A+ +d   C kC  t
  MMETSP1325-20131115|3971_1 121 KVCT-PRCPAcAVFKASFFDQTICNKCRAT 149
                 7898.9998746***************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 1080.71
//
Query:       MMETSP1325-20131115|3973_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-14   49.7   2.2    2.5e-06   26.2   0.2    2.6  3  PF00036.27 EF hand
    2.1e-11   43.6   0.7    2.5e-11   43.4   0.5    1.2  1  PF13499.1  EF-hand domain pair
    4.6e-11   41.5   2.5    1.7e-05   24.2   0.0    2.9  4  PF13405.1  EF-hand domain
    1.4e-08   34.1   4.5    1.7e-07   30.5   0.6    2.1  2  PF13833.1  EF-hand domain pair
    5.1e-08   31.8   0.5    7.8e-05   21.7   0.0    2.8  3  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.074   12.7   0.0      0.081   12.5   0.0    1.2  1  PF02087.10 Nitrophorin
       0.11   12.6   0.0       0.19   11.9   0.0    1.3  1  PF08672.6  Anaphase promoting complex (APC) subunit 2
       0.11   12.1   0.0        0.2   11.3   0.0    1.4  1  PF09331.6  Domain of unknown function (DUF1985)


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         2   3.4e+03      18      24 ..       5      11 ..       5      14 .. 0.75
   2 !   22.9   0.0   1.7e-08   2.9e-05       3      26 ..      20      43 ..      18      45 .. 0.88
   3 !   26.2   0.2   1.5e-09   2.5e-06       1      27 [.      54      80 ..      54      82 .. 0.95

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 2
                EHHHHHH CS
  PF00036.27 18 sfeEfke 24
                +f E+k+
  MMETSP1325-20131115|3973_1  5 DFAELKK 11
                7888875 PP

  == domain 2    score: 22.9 bits;  conditional E-value: 1.7e-08
                HHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkeal 26
                 eaF+++DkDgdG +s+ ++ + +
  MMETSP1325-20131115|3973_1 20 VEAFNVYDKDGDGEVSLGDLYQTM 43
                69***************9998766 PP

  == domain 3    score: 26.2 bits;  conditional E-value: 1.5e-09
                HHHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealk 27
                e+ke+ +e D  ++G+I+fe+f++a+ 
  MMETSP1325-20131115|3973_1 54 EVKEMLNECDLHHNGFINFEDFRKAMG 80
                79***********************96 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.5   1.5e-14   2.5e-11       2      66 .]      19      79 ..       7      79 .. 0.94

  Alignments for each domain:
  == domain 1    score: 43.4 bits;  conditional E-value: 1.5e-14
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66
                l eaF+ +Dkdgdg ++  +L + +   g+  + +ev+e+    ++e D+ ++G+++fe+f++a+
  MMETSP1325-20131115|3973_1 19 LVEAFNVYDKDGDGEVSLGDLYQTMLSNGESVTLDEVKEM----LNECDLHHNGFINFEDFRKAM 79
                5579*************************99889999999....*******************98 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       5.8     1e+04      18      24 ..       5      11 ..       5      13 .. 0.74
   2 !   24.2   0.0   9.8e-09   1.7e-05       2      27 ..      19      44 ..      18      48 .. 0.86
   3 ?    2.0   0.0      0.13   2.3e+02      16      27 ..      49      60 ..      44      64 .. 0.84
   4 !   16.4   0.1   3.1e-06    0.0052       2      27 ..      55      80 ..      54      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 5.8
                ---HHHH CS
   PF13405.1 18 daeELrd 24
                d++EL++
  MMETSP1325-20131115|3973_1  5 DFAELKK 11
                6788875 PP

  == domain 2    score: 24.2 bits;  conditional E-value: 9.8e-09
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                l eaF+ +DkdgdG++++ +L + + 
  MMETSP1325-20131115|3973_1 19 LVEAFNVYDKDGDGEVSLGDLYQTML 44
                679******************88665 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.13
                -B---HHHHHHH CS
   PF13405.1 16 kidaeELrdaLr 27
                 ++++E++ +L+
  MMETSP1325-20131115|3973_1 49 SVTLDEVKEMLN 60
                799*****9997 PP

  == domain 4    score: 16.4 bits;  conditional E-value: 3.1e-06
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                ++e  +  D  ++G+i++e++r+a+ 
  MMETSP1325-20131115|3973_1 55 VKEMLNECDLHHNGFINFEDFRKAMG 80
                57778899****************97 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.1   0.00017      0.29      10      52 ..       9      44 ..       5      46 .. 0.78
   2 !   30.5   0.6     1e-10   1.7e-07       2      51 ..      31      79 ..      30      82 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00017
   PF13833.1 10 Lkralallglkglseee.vdilfrefDtdgdGkisfeEFcvlle 52
                Lk+       k l+e + + + f++ D dgdG +s+ + ++ + 
  MMETSP1325-20131115|3973_1  9 LKK-------K-LNERKaLVEAFNVYDKDGDGEVSLGDLYQTML 44
                444.......4.7788888899*************988888776 PP

  == domain 2    score: 30.5 bits;  conditional E-value: 1e-10
   PF13833.1  2 kGlItreeLkral.allglkglseeevdilfrefDtdgdGkisfeEFcvll 51
                +G+++  +L+  + ++ g + ++ +ev ++++e D+ ++G i+fe+F +++
  MMETSP1325-20131115|3973_1 31 DGEVSLGDLYQTMlSN-GES-VTLDEVKEMLNECDLHHNGFINFEDFRKAM 79
                8************666.999.**************************9887 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.82   1.4e+03      17      23 ..       5      11 ..       5      13 .. 0.78
   2 !   21.7   0.0   4.5e-08   7.8e-05       2      23 ..      20      41 ..      19      44 .. 0.85
   3 !    7.3   0.0    0.0016       2.7       5      24 ..      59      78 ..      55      79 .. 0.76

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.82
                -HHHHHH CS
   PF13202.1 17 sreELkr 23
                ++ ELk+
  MMETSP1325-20131115|3973_1  5 DFAELKK 11
                7899986 PP

  == domain 2    score: 21.7 bits;  conditional E-value: 4.5e-08
                HHHHHHH--S----B-HHHHHH CS
   PF13202.1  2 kdtFrafDlNgDGkIsreELkr 23
                +++F+++D++gDG +s  +L++
  MMETSP1325-20131115|3973_1 20 VEAFNVYDKDGDGEVSLGDLYQ 41
                566**************99987 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.0016
                HHHH--S----B-HHHHHHH CS
   PF13202.1  5 FrafDlNgDGkIsreELkrl 24
                +++ Dl   G+I++e++++ 
  MMETSP1325-20131115|3973_1 59 LNECDLHHNGFINFEDFRKA 78
                566667778********984 PP

>> PF02087.10  Nitrophorin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   4.7e-05     0.081     123     167 ..      31      75 ..      11      84 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.7e-05
                 ----B---EEEEEESSTT----HHHHHHCHHGT--GGGSEECTTS CS
  PF02087.10 123 eGskdlGdlytvlsrqkdaeasakvksavtqaglklsdfvstkdl 167
                 +G+  lGdly  +  + ++ + ++vk+ + +  l+ + f++  d 
  MMETSP1325-20131115|3973_1  31 DGEVSLGDLYQTMLSNGESVTLDEVKEMLNECDLHHNGFINFEDF 75 
                 57889***********************************98775 PP

>> PF08672.6  Anaphase promoting complex (APC) subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011      0.19       3      33 ..      41      72 ..      40      75 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00011
                ---TTT---B-HHHHHHHHHHH.-TT---TT- CS
   PF08672.6  3 vgMLtNlgsLplerihsmLkmf.pkdkegatv 33
                ++ML N +s  l+ ++ mL+   ++++++ ++
  MMETSP1325-20131115|3973_1 41 QTMLSNGESVTLDEVKEMLNECdLHHNGFINF 72
                68*****************9887777777665 PP

>> PF09331.6  Domain of unknown function (DUF1985)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012       0.2      46      81 ..      27      62 ..      19      70 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00012
   PF09331.6 46 kkkkkgkkekksfwkklfgkkkkvtvedveeklkkk 81
                +k+ +g+   +++++++  + ++vt+++v+e+l+++
  MMETSP1325-20131115|3973_1 27 DKDGDGEVSLGDLYQTMLSNGESVTLDEVKEMLNEC 62
                4555555655699*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|3970_1  [L=355]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-76  256.2   0.4    2.5e-76  255.8   0.3    1.2  1  PF07137.6  Violaxanthin de-epoxidase (VDE)
    0.00068   19.5   0.0     0.0015   18.4   0.0    1.5  1  PF00061.18 Lipocalin / cytosolic fatty-acid binding protein family


Domain annotation for each model (and alignments):
>> PF07137.6  Violaxanthin de-epoxidase (VDE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.8   0.3   3.7e-80   2.5e-76       1     190 [.      71     256 ..      71     265 .. 0.95

  Alignments for each domain:
  == domain 1    score: 255.8 bits;  conditional E-value: 3.7e-80
   PF07137.6   1 efnecavsrkkcvprksdvgefpvpdpsvlvknfnlkdfsgkwyitsglnptfdafdcqlhefrleed.klvgnlswriktpdggfftrsavqkfvqdpsqpailynhdneylhyqddwyilsskienkeddyifvyyrgrndawdgyggavlytrsavlpesivpelekaaksvgrdfskfirtdntcgp 190
                 efn cavs+k cvp++ d g +pvp  + + k+f+ ++f+g+wyi++gln +fd+f cq+h f   +   l g+l+wri  pdg fftr+avq+fvqdp++p+ilynhdneylhyqddwy+l s     ++++ +vyyrg ndawdgygga+lytr +++p ++vp le+aak+   +f++f+rtdn+c +
  MMETSP1325-20131115|3970_1  71 EFNACAVSQKSCVPQRQDDGSYPVPPAESITKDFKTQNFEGRWYISAGLNKAFDTFPCQVHFFTSPQPgVLYGKLNWRIVEPDGEFFTRNAVQRFVQDPKNPGILYNHDNEYLHYQDDWYVLDS-----DKNFFLVYYRGSNDAWDGYGGAFLYTREQTVPPELVPRLEEAAKRANLNFADFVRTDNSCPT 256
                 7**************************************************************987653899**************************************************87.....6789********************************************************75 PP

>> PF00061.18  Lipocalin / cytosolic fatty-acid binding protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.2e-07    0.0015      71     142 ..     179     252 ..     160     253 .. 0.81

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 2.2e-07
                 EE....CTTEEEEEEEEEESSSEEEEEEEEEET.STEEEEEEEEESSSCEECHHHHHHHHHHHHTEETGGEEEEEEE CS
  PF00061.18  71 de....yldgrkvkvlttdydnylilylkkdke.gkttlvaellsrdpelspelleefkkflkelgideenivrlyq 142
                 d+    y+d  + +vl+ d  n++++y  + ++ ++    a+l++r++++ pel+ + ++++k+ +++  ++vr+++
  MMETSP1325-20131115|3970_1 179 DNeylhYQD--DWYVLDSDK-NFFLVYYRGSNDaWDGYGGAFLYTREQTVPPELVPRLEEAAKRANLNFADFVRTDN 252
                 444332322..68999****.99999999998889999************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       565  (0.0413253); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.61
# Mc/sec: 1394.60
//
Query:       MMETSP1325-20131115|3974_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 1274.66
//
Query:       MMETSP1325-20131115|3976_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-05   22.5   0.0    8.3e-05   22.1   0.0    1.1  1  PF13847.1 Methyltransferase domain
    0.00068   20.0   0.0    0.00096   19.5   0.0    1.2  1  PF12847.2 Methyltransferase domain
    0.00088   19.5   0.0     0.0017   18.7   0.0    1.4  2  PF08241.7 Methyltransferase domain
    0.00095   19.3   0.0     0.0016   18.6   0.0    1.4  1  PF13649.1 Methyltransferase domain
     0.0017   18.6   0.0     0.0029   17.9   0.0    1.4  1  PF08242.7 Methyltransferase domain
     0.0049   16.7   0.0     0.0077   16.1   0.0    1.3  1  PF13659.1 Methyltransferase domain
     0.0098   15.4   0.0      0.011   15.3   0.0    1.2  1  PF13489.1 Methyltransferase domain
  ------ inclusion threshold ------
      0.059   12.6   0.0      0.069   12.4   0.0    1.2  1  PF07021.7 Methionine biosynthesis protein MetW


Domain annotation for each model (and alignments):
>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   4.8e-08   8.3e-05       3      46 ..      37      77 ..      35      80 .. 0.89

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 4.8e-08
   PF13847.1  3 sgikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAke 46
                 ++k+lD+GCG+G +l +    +g+    +G++++e +ie A+ 
  MMETSP1325-20131115|3976_1 37 TDMKLLDAGCGSGNYLNAVRPSIGS---GTGLEFNEGMIEQANS 77
                689*****************87666...89************97 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   5.6e-07   0.00096       4      45 ..      40      79 ..      37      88 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 5.6e-07
   PF12847.2  4 rilDlGcGtGslslelarlrpgakvvgvDpseeslelarena 45
                ++lD GcG+G++ l + r    +  +g++++e+++e+a+ + 
  MMETSP1325-20131115|3976_1 40 KLLDAGCGSGNY-LNAVRP-SIGSGTGLEFNEGMIEQANSKF 79
                79**********.666662.56669*************9887 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       5.1   8.7e+03      23      33 ..      16      26 ..       7      36 .. 0.62
   2 !   18.7   0.0   9.8e-07    0.0017       1      39 [.      42      79 ..      42      85 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 5.1
   PF08241.7 23 tgvDlseemla 33
                +g+D+ + +l+
  MMETSP1325-20131115|3976_1 16 IGLDVITGALE 26
                56666665554 PP

  == domain 2    score: 18.7 bits;  conditional E-value: 9.8e-07
   PF08241.7  1 LdvGcGtglllealaerpaarvtgvDlseemlatakerl 39
                Ld+GcG+g++l+a++    ++ tg++++e m+++a+ + 
  MMETSP1325-20131115|3976_1 42 LDAGCGSGNYLNAVRPS-IGSGTGLEFNEGMIEQANSKF 79
                8****************.****************99875 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   9.6e-07    0.0016       2      44 ..      42      79 ..      41      88 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 9.6e-07
   PF13649.1  2 ldlGCGsGrviraltraldkgpeqrvigvDiseealelakerl 44
                ld+GCGsG++++a   +       + +g++++e ++e+a++++
  MMETSP1325-20131115|3976_1 42 LDAGCGSGNYLNAVRPSI-----GSGTGLEFNEGMIEQANSKF 79
                9*************9775.....689**************998 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.7e-06    0.0029       1      40 [.      42      79 ..      42      86 .. 0.93

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.7e-06
   PF08242.7  1 LeiGcGtGsllralleklpdieytgvDispsaiedakekl 40
                L+ GcG+G+ l a++++    + tg+++++ +ie+a  k+
  MMETSP1325-20131115|3976_1 42 LDAGCGSGNYLNAVRPS--IGSGTGLEFNEGMIEQANSKF 79
                89***************..9999**********9999887 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   4.5e-06    0.0077       3      41 ..      40      77 ..      38      86 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 4.5e-06
   PF13659.1  3 rvldpgcGsGtfllaalellaalllgvEldpraaalaar 41
                ++ld gcGsG++l+a+       ++g+E ++  ++ a+ 
  MMETSP1325-20131115|3976_1 40 KLLDAGCGSGNYLNAVRPSI-GSGTGLEFNEGMIEQANS 77
                79***************999.9******99987777665 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   6.2e-06     0.011      20      57 ..      35      72 ..      10      85 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 6.2e-06
   PF13489.1 20 lkpggrvLDiGcGtGillellaengfdvtgvDpspaai 57
                + +++++LD GcG+G++l   +++  + tg + ++ +i
  MMETSP1325-20131115|3976_1 35 KSTDMKLLDAGCGSGNYLNAVRPSIGSGTGLEFNEGMI 72
                67899**************9999866677776666555 PP

>> PF07021.7  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     4e-05     0.069      14      53 ..      38      76 ..      25      85 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4e-05
   PF07021.7 14 gsrvldlGcGdGellellkeekqvdgrGleldeegvaecv 53
                  ++ld GcG G+ l+ ++ +   +g Gle +e  + ++ 
  MMETSP1325-20131115|3976_1 38 DMKLLDAGCGSGNYLNAVRPSI-GSGTGLEFNEGMIEQAN 76
                5689**************8844.4899***9999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|3977_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-05   22.4  17.2    0.00076   19.4   9.6    3.5  2  PF02429.10 Peridinin-chlorophyll A binding protein
  ------ inclusion threshold ------
      0.024   14.5   2.0        0.1   12.5   1.4    2.3  1  PF12608.3  Protein of unknown function (DUF3773)


Domain annotation for each model (and alignments):
>> PF02429.10  Peridinin-chlorophyll A binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2     0.022   1.5e+02       3      16 ..      35      48 ..       8      50 .. 0.60
   2 !   19.4   9.6   1.1e-07   0.00076       3     141 ..      35     189 ..      33     193 .. 0.73

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.022
                ---HHHHHHHHHHH CS
  PF02429.10  3 igdAakklseasYp 16
                i++Aa k+ + +Yp
  MMETSP1325-20131115|3977_1 35 IDSAAIKVVDTTYP 48
                55555555555555 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 1.1e-07
                 ---HHHHHHHHHHHHHHHS-TT-S.....GGGS------HHHHHHHHHHHHH--------HHHHHHHHHHHH-.----------HHHHHHHHHH---TGGGS-HHHHHHHHHHH-----.........THH.HHHHHHTS-HHHHHHHHHHHHHH CS
  PF02429.10   3 igdAakklseasYpflkeidwlsd.....vylkdlpaknpkkalkaidkmlevgaamdpnllkaaveAHhkAi.gsidakgvaskaDyaavnaAlgrviasvpkskvmdvynafaelvd.........kdv.qaklfskvnaldAeaAykaflal 141
                 i++Aa k+ + +Yp++  +   +      + +k   +++p+  +k i       +  dp++l aa +A  +   +++    +    + + v +A +  +a+ +k+kv++v na+ ++++         ++v +akl skvn++dA aA +a+l+l
  MMETSP1325-20131115|3977_1  35 IDSAAIKVVDTTYPIVTSLPPAEVapvlsKAIKLGLSADPNALVKLIKAADAALLSTDPKALVAALKAVDNTAeAALAKGTLPPIGEVENVAKAASAALATTDKAKVKEVTNALIGVTGsldkiklaqTTVdGAKLASKVNPKDAAAATEALLEL 189
                 99**************99987776554444444333334444444444444444678*********99877664777777788999***************************98875422121111134433689****************987 PP

>> PF12608.3  Protein of unknown function (DUF3773)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.4   1.5e-05       0.1      45      77 ..     126     158 ..      70     194 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.5e-05
   PF12608.3  45 dqlaSlaLffglkqrvekaevallGvkpsFDda 77 
                  ++aS+aL   +k++v+++++al Gv  s D +
  MMETSP1325-20131115|3977_1 126 AKAASAALATTDKAKVKEVTNALIGVTGSLDKI 158
                 5789***********************999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       661  (0.048347); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.42s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 920.95
//
Query:       MMETSP1325-20131115|3960_1  [L=573]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   18.3   2.7       0.49   10.1   0.0    2.9  3  PF01145.20 SPFH domain / Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.28   3.9e+03       2      41 ..      20      64 ..      19      79 .. 0.72
   2 !   10.1   0.0   3.6e-05      0.49      30      82 ..     228     277 ..     216     291 .. 0.78
   3 !    4.4   2.1     0.002        27     128     178 ..     321     381 ..     313     402 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.28
  PF01145.20  2 tvepgevgvvvr.fGkvkrvlepG...lhf.klPfgekvtvvstr 41
                t+++ge + v    G+ ++v +p    l + ++ f++++ + +t+
  MMETSP1325-20131115|3960_1 20 TIKAGECAAVWDsRGRHRQVMGPQvvhLWWsTIRFLDRHSATPTQ 64
                789999999988899999999998644444444466666666665 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 3.6e-05
  PF01145.20  30 PfgekvtvvstrvqtldvsdesvtvptkDglnvtvdvtvryrvsdakkliaav 82 
                 P   ++ v +t  +t++v +   t++t+D++++t + t++y+++    l+a+ 
  MMETSP1325-20131115|3960_1 228 PGALRFNVLETNARTWSVDA---TMRTSDNIPFTCQLTFNYKLKSLEHLLASS 277
                 55556678888899999999...********************6666555544 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.002
  PF01145.20 128 lneqlqkygievvdvritdvdpppevkqalakkqaaeaeaa..........eaeiaraeae 178
                 l+e+++  g  ++ v +++v  ++ +++++++++a ea+ a          +a++a+ae+e
  MMETSP1325-20131115|3960_1 321 LRERMEANGFALNAVILRRVIASEALERRFNAAAAEEADGArrlalaetnlKAAQAKAETE 381
                 7899999999*****************************9999999999998888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (573 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       936  (0.0684611); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.99u 0.36s 00:00:01.35 Elapsed: 00:00:00.73
# Mc/sec: 1880.98
//
Query:       MMETSP1325-20131115|3980_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.2   0.5      0.012   15.0   0.4    1.1  1  PF01442.13 Apolipoprotein A1/A4/E domain
       0.05   11.8   0.9      0.052   11.7   0.6    1.0  1  PF01499.11 Herpesvirus UL25 family
        0.1   12.7   0.2       0.16   12.1   0.1    1.3  1  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.12   11.4   1.0       0.13   11.3   0.7    1.0  1  PF11802.3  Centromere-associated protein K
       0.64    9.8   5.3        1.1    9.0   3.5    1.5  1  PF10779.4  Haemolysin XhlA


Domain annotation for each model (and alignments):
>> PF01442.13  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.4   4.4e-06     0.012     111     154 ..      14      57 ..       8      88 .. 0.72

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4.4e-06
                 ---HHHHHH----------XXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01442.13 111 qnvealkerLaPyaeelrqklaerleelkesltpqaeelkaqls 154
                 + +e++k++L +++++++++l+e+l+ l  ++++q ee + +ls
  MMETSP1325-20131115|3980_1  14 DTIEKIKTNLKSDLDRFHEGLSEKLDALTAKMSEQNEENERRLS 57 
                 56777788888888888888888888888888888777777765 PP

>> PF01499.11  Herpesvirus UL25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.6   1.9e-05     0.052      53     108 ..      33      88 ..       5     102 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.9e-05
  PF01499.11  53 alkaeLdnleaksqtrseeiearLreieaeleevadaldlletaaaaaeeadaaes 108
                  l+  Ld l ak+ ++ ee e+rL+ ie+++   ++++ +++t+++a + + ++ +
  MMETSP1325-20131115|3980_1  33 GLSEKLDALTAKMSEQNEENERRLSIIEDAIFASQRPEGTQMTQEEASPRNRPVAE 88 
                 68889*********************************999999998887666554 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   5.8e-05      0.16      12      61 ..       8      59 ..       4      72 .. 0.63

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.8e-05
   PF05531.7 12 dikavddkVdalqqqvddvqenlpdvte.lnekLdaqsaqLaelet....kvenI 61
                d +a dd ++ +++   +++++l  ++e l+ekLda++a++ e ++     ++ I
  MMETSP1325-20131115|3980_1  8 DLEAADDTIEKIKT---NLKSDLDRFHEgLSEKLDALTAKMSEQNEenerRLSII 59
                44455555544443...455555555544999******99998777444444444 PP

>> PF11802.3  Centromere-associated protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.7   4.8e-05      0.13      96     156 ..       4      64 ..       1      80 [. 0.65

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4.8e-05
   PF11802.3  96 klksdLemvLssvkkknekLkedLereqkfldeqqq.ildslkelqkelknkvrtlsesrif 156
                 k   dLe    +++k +  Lk dL+r ++ l+e+ + +   ++e+++e ++++    e  if
  MMETSP1325-20131115|3980_1   4 KRDDDLEAADDTIEKIKTNLKSDLDRFHEGLSEKLDaLTAKMSEQNEENERRLS-IIEDAIF 64 
                 67789*******************987665555443044444444444444333.3344444 PP

>> PF10779.4  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   3.5   0.00042       1.1       7      49 ..      15      62 ..       9      65 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00042
   PF10779.4  7 rlnrietklke.....eekaenalEkadaalekqiknlnkdLskIkkn 49
                 +++i+t+lk+     +e   ++l+  +a++ +q ++++++Ls I++ 
  MMETSP1325-20131115|3980_1 15 TIEKIKTNLKSdldrfHEGLSEKLDALTAKMSEQNEENERRLSIIEDA 62
                678999999999999******************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       833  (0.0609274); expected 273.4 (0.02)
Passed bias filter:                      683  (0.0499561); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.63
# Mc/sec: 441.23
//
Query:       MMETSP1325-20131115|3981_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   17.3   0.1      0.036   13.7   0.1    2.6  2  PF07707.10 BTB And C-terminal Kelch
  ------ inclusion threshold ------
      0.014   15.2   0.1       0.22   11.3   0.1    2.5  3  PF00651.26 BTB/POZ domain
      0.022   13.2   6.4      0.011   14.2   2.3    1.8  2  PF13148.1  Protein of unknown function (DUF3987)


Domain annotation for each model (and alignments):
>> PF07707.10  BTB And C-terminal Kelch
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.13     6e+02      63      84 ..      79     101 ..      77     130 .. 0.72
   2 !   13.7   0.1   7.9e-06     0.036       1      43 [.     138     180 ..     138     194 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.13
  PF07707.10  63 feavlkWvkhdke.erkkhlael 84 
                 fe +++Wv+ + + +r +++ael
  MMETSP1325-20131115|3981_1  79 FENAVRWVQLQDAtRRIEMVAEL 101
                 77899999965550455555554 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 7.9e-06
  PF07707.10   1 clgilefAeaysleeLkeaakkfilknfeevvkseeFleLsle 43 
                 cl+il++A++++ + L++++ +f+l+++e++ +++ ++e+s+e
  MMETSP1325-20131115|3981_1 138 CLSILSLADTLEAHALRDHCSTFCLRRIEALETQSAWKEVSPE 180
                 9************************************999986 PP

>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.84   3.8e+03      28      48 ..      36      55 ..      33      64 .. 0.75
   2 ?    0.7   0.0       0.1   4.6e+02      80     105 ..     102     127 ..      92     132 .. 0.78
   3 ?   11.3   0.1   4.9e-05      0.22      80     109 ..     134     163 ..     126     165 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.84
                HHHHHH-HHHHHHTTTTTTTT CS
  PF00651.26 28 avLaarSpyFkalftggeiee 48
                a L a S+ Fk  +  +  +e
  MMETSP1325-20131115|3981_1 36 AALVAVSDWFKLALAPK-ANE 55
                789999*9999888777.344 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.1
                 ECCHHHHHHHHHHHHT-HHHHCHHHH CS
  PF00651.26  80 seenveelLaaadllqiprlkdacee 105
                 + ++v+  L +a++l +++l d +++
  MMETSP1325-20131115|3981_1 102 DGDDVVPTLMTARYLGMQELFDGAQR 127
                 46789999**********99886665 PP

  == domain 3    score: 11.3 bits;  conditional E-value: 4.9e-05
                 ECCHHHHHHHHHHHHT-HHHHCHHHHHHHH CS
  PF00651.26  80 seenveelLaaadllqiprlkdaceeflke 109
                 +een  ++L++ad l+ ++l+d+c++f+++
  MMETSP1325-20131115|3981_1 134 DEENCLSILSLADTLEAHALRDHCSTFCLR 163
                 5899**********************9976 PP

>> PF13148.1  Protein of unknown function (DUF3987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0     0.089   4.1e+02     323     366 ..     111     154 ..     109     156 .. 0.85
   2 ?   14.2   2.3   2.4e-06     0.011      47     127 ..     193     269 ..     190     277 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.089
   PF13148.1 323 nvaRiaallhllrgidtgdeleIsaedfeaAlalaeyllrharr 366
                 ++aR  +  +l++g + +  + +++e   + l+la++l +ha+r
  MMETSP1325-20131115|3981_1 111 MTARYLGMQELFDGAQRRIMEGVDEENCLSILSLADTLEAHALR 154
                 6778888888888888888888999999999**********987 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 2.4e-06
   PF13148.1  47 esGegKsavdklallpleeieeelreeyeeelkeykaekeiweaekkglekkakkaakkgdeeaaaeelleleaeepekPr 127
                 e++e+ + +d+++   l+e+ + lre+ ++++++y +  e++++++++l +k++   ++g++ a+++++++  a ++ kPr
  MMETSP1325-20131115|3981_1 193 EASERYGLADDAFAD-LRELVAMLREQLRDQRERYAESAELARQDEMALANKLR---RRGSPLATESAIAASVARACRKPR 269
                 68999999*******.*********************************99976...445677888888888999888884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.65
# Mc/sec: 1102.32
//
Query:       MMETSP1325-20131115|3984_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-08   33.0   0.0    3.7e-08   32.8   0.0    1.0  1  PF05427.6 Acidic fibroblast growth factor binding (FIBP)


Domain annotation for each model (and alignments):
>> PF05427.6  Acidic fibroblast growth factor binding (FIBP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   2.7e-12   3.7e-08     271     336 ..       7      72 ..       2      89 .. 0.90

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 2.7e-12
   PF05427.6 271 snfkslsraliniaaklsrarelrdlfvdlvekliePlrankWpsedvklflealtqsvkalevsr 336
                   f++  ++l++i+a+l + +e+rdlf d+ +k++ePl +++ +s d+++ l+a ++   +l++ r
  MMETSP1325-20131115|3984_1   7 RAFRTAAKGLVSIGAGLAQLKEFRDLFEDVNQKVVEPLLEAGLNSMDIAVVLSATAHVFGDLDALR 72 
                 57****************************************************999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.73
# Mc/sec: 298.72
//
Query:       MMETSP1325-20131115|3982_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 1242.19
//
Query:       MMETSP1325-20131115|3987_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.074   12.2   0.0       0.13   11.4   0.0    1.4  1  PF00240.18 Ubiquitin family
       0.11   12.4   0.0       0.17   11.8   0.0    1.3  1  PF00789.15 UBX domain


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.9e-05      0.13       3      40 ..     134     171 ..     132     174 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.9e-05
                 SSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE CS
  PF00240.18   3 lsgktitlevepsdtvselKekieekegipvdqqrLiy 40 
                 ++g++++ e+   ++v+ lK  i+++ gi +  q+L +
  MMETSP1325-20131115|3987_1 134 PDGSSVESEFAIGQSVEVLKSYIASECGIQMGEQQLYL 171
                 67889999***************************976 PP

>> PF00789.15  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.4e-05      0.17       5      42 ..     125     162 ..     121     192 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.4e-05
                 SEEEEEEEE----EEEEEEESSSBHHHHHHHHHHHHSG CS
  PF00789.15   5 dvcrlqiRlpDGsrlvrrFkksdtvesvyeyvdshlde 42 
                 +++ + + lpDGs+ + +F   ++ve + +y+ s++  
  MMETSP1325-20131115|3987_1 125 TPVLVVFELPDGSSVESEFAIGQSVEVLKSYIASECGI 162
                 56778899*************************98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 1217.74
//
Query:       MMETSP1325-20131115|3988_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-50  169.2   0.0    6.7e-50  168.7   0.0    1.2  1  PF00406.17 Adenylate kinase
    3.4e-10   39.2   2.2    1.2e-05   24.7   0.0    3.4  4  PF05191.9  Adenylate kinase, active site lid
      0.001   19.7   0.0     0.0019   18.8   0.0    1.4  1  PF13207.1  AAA domain
     0.0059   16.3   0.0      0.011   15.4   0.0    1.5  1  PF13671.1  AAA domain
  ------ inclusion threshold ------
      0.071   13.3   0.0       0.35   11.0   0.0    1.9  1  PF13238.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00406.17  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.7   0.0   2.5e-53   6.7e-50       1     148 [.     117     312 ..     117     315 .. 0.99

  Alignments for each domain:
  == domain 1    score: 168.7 bits;  conditional E-value: 2.5e-53
                 EE--TT-----HHHHHHHHCS-EEEE---HHHHHHHCT-----HHHHHHHTT----HHHHHHHHHHHHHSHCGH-EEEEE----SHHHHHHHHHHHHCTT-EESEEEEEE--HHHHHHHHHH................................................GSHHHHHHHHHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................................xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00406.17   1 llGaPgaGKGtqaeklvkkyglvhlstGdllRaevksgtelGkeakevmdkgelvpdevvvklvkerleqkdkkkgflldgfPRtveqaealeelleeekvkldlvleldvpeevlveRllk................................................DneetvkkRletykkqtepvidyykk 148
                 + G+PgaGKGtq +k+ +  g+++lstGd++Ra++ +gt++G ++k+++ kg lv+d++v+++++ r++++d+k+gf+ldgfPRt+eqa+ l++ll++++ +++ v+ ldvp+++l eR+ +                                                D++ ++k+Rl+ty+k+t+p++++y  
  MMETSP1325-20131115|3988_1 117 IFGPPGAGKGTQGPKIEDLCGIPQLSTGDMIRAAIGAGTPVGLKVKDLVSKGALVSDDIVLEMIETRIQDDDCKNGFILDGFPRTMEQAKGLDKLLNKTGERVTRVMALDVPDSILEERICGrwihkksgtsyhvkfappksmeldangvpikesmkddatgeplmqrpdDTAAALKNRLATYHKETTPILNHYGP 312
                 68************************************************************************************************************************************************************************************************75 PP

>> PF05191.9  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.7   7.3e+03      18      24 ..     130     136 ..     128     138 .. 0.68
   2 !   24.7   0.0   4.5e-09   1.2e-05       1      23 [.     239     261 ..     239     265 .. 0.91
   3 !   12.6   0.0   2.7e-05     0.074      17      36 .]     267     286 ..     263     286 .. 0.93
   4 ?   -1.5   0.1       0.7   1.9e+03       9      18 ..     297     312 ..     297     317 .. 0.65

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 2.7
                 -S----- CS
   PF05191.9  18 PkvdgvC 24 
                 Pk +++C
  MMETSP1325-20131115|3988_1 130 PKIEDLC 136
                 6777777 PP

  == domain 2    score: 24.7 bits;  conditional E-value: 4.5e-09
                 -EEES----EEBTTTB--S---- CS
   PF05191.9   1 RrvCpdCGrvYhikfnpPkvdgv 23 
                 R++++++G++Yh+kf pPk  ++
  MMETSP1325-20131115|3988_1 239 RWIHKKSGTSYHVKFAPPKSMEL 261
                 9******************8766 PP

  == domain 3    score: 12.6 bits;  conditional E-value: 2.7e-05
                 --S-----S-----EE--TT CS
   PF05191.9  17 pPkvdgvCDkCgepLiqRkD 36 
                 p k+  ++D +gepL qR D
  MMETSP1325-20131115|3988_1 267 PIKESMKDDATGEPLMQRPD 286
                 789999************99 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 0.7
                 -EEBTTTB-......- CS
   PF05191.9   9 rvYhikfnp......P 18 
                 ++Yh ++ p      P
  MMETSP1325-20131115|3988_1 297 ATYHKETTPilnhygP 312
                 58**999884444445 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0     7e-07    0.0019       3     101 ..     116     230 ..     114     251 .. 0.58

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 7e-07
                 --B--TT---HHHHHHHHHHSTEEEEEGGG.B-........-GGGS-B--.---B--.SSGGGB-HHHHHHHH.....H..HHHHHH........TTS.-----------EEEEE----T CS
   PF13207.1   3 aitGppGsGKsTlakeLaerlglpvlsldd.ll........reeglkeld.dgeres.kdadadllaaildglaa.kkdtlswvidg........ale.seldlrleeadeiiyldaplp 101
                  i+GppG+GK T   ++++  g+p ls++d ++              +l+ ++  +      +d++ + ++   +  +   ++++dg        ++    l+   e++++++ ld p+ 
  MMETSP1325-20131115|3988_1 116 MIFGPPGAGKGTQGPKIEDLCGIPQLSTGDmIRaaigagtpV-----GLKvKDLVSKgALVSDDIVLEMIETRIQdDDCKNGFILDGfprtmeqaKGLdKLLNKTGERVTRVMALDVPDS 230
                 79*****************99*********443665433221.....2222222222334444444555444433435666699999777665542222222223334444444444443 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   4.1e-06     0.011       2     122 ..     115     243 ..     114     256 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 4.1e-06
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrlsqdtlrkrlfgtdqqsktdytrvlkr....lyqilnklarkalsag...rsvivdatnlsreerarfvklakrlgvpv.rivylevpeetlreRlakRerng 122
                 +++ G+pG+GK t   ++   +g+  ls+ +++++  g + +   +  ++ ++      +i+++++++++++    + +i+d   ++ e+ + ++kl+++ g +v r++ l+vp++ l+eR+  R  ++
  MMETSP1325-20131115|3988_1 115 MMIFGPPGAGKGTQGPKIEDLCGIPQLSTGDMIRAAIGAGTPVGLKVKDLVSKgalvSDDIVLEMIETRIQDDdckNGFILDGFPRTMEQAKGLDKLLNKTGERVtRVMALDVPDSILEERICGRWIHK 243
                 6899**********9999988899999998888888887777666544433222344677999******998766588****877888999***********885499*************99886665 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00013      0.35       2     109 ..     116     236 ..     116     247 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00013
   PF13238.1   2 litGtpGvGKtTlakeLaerl.....................gdvlrdlakengleeevddkidtkeskeldedkldelldkleeneselaegenviidghlaeleledlkdlkl..........vvLradpeelarRl 109
                 +i G+pG+GK T + ++++ +                     g +++dl+ +  l++++                 + + + +++++     ++  i+dg+++ +e  ++ d  l            L++++ +l +R+
  MMETSP1325-20131115|3988_1 116 MIFGPPGAGKGTQGPKIEDLCgipqlstgdmiraaigagtpvGLKVKDLVSKGALVSDDIVL--------------EMIETRIQDDD----CKNGFILDGFPRTMEQAKGLDKLLnktgervtrvMALDVPDSILEERI 236
                 599**************998799999985555555555555544444444444444444333..............33333333322....233336666666666666665555666666666677777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       761  (0.0556612); expected 273.4 (0.02)
Passed bias filter:                      564  (0.0412522); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.33s 00:00:01.08 Elapsed: 00:00:00.48
# Mc/sec: 1687.43
//
Query:       MMETSP1325-20131115|3991_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 455.31
//
Query:       MMETSP1325-20131115|3989_1  [L=309]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-14   51.0   2.7    7.7e-14   51.0   1.8    2.9  3  PF05739.14 SNARE domain
    3.2e-09   36.7   7.0    3.2e-09   36.7   4.8    2.0  2  PF00804.20 Syntaxin
  ------ inclusion threshold ------
      0.099   12.6  11.5        0.2   11.7   2.9    3.0  2  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
       0.28   10.5   3.2        7.1    6.0   0.0    3.1  3  PF02346.11 Chordopoxvirus fusion protein
       0.46   10.3   8.5       0.11   12.4   2.1    2.2  2  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
        1.8    7.3   9.6      0.089   11.5   0.8    2.2  2  PF13292.1  1-deoxy-D-xylulose-5-phosphate synthase
        2.5    8.1  10.0        4.6    7.2   3.0    2.8  2  PF10303.4  Protein of unknown function (DUF2408)
        2.6    8.2  13.0       0.36   11.0   3.7    2.2  2  PF03234.9  Cdc37 N terminal kinase binding
        2.7    6.6  13.9       0.75    8.4   0.2    3.0  3  PF02181.18 Formin Homology 2 Domain
        5.8    6.8   8.3        7.7    6.4   1.0    3.7  4  PF06013.7  Proteins of 100 residues with WXG
        6.2    5.9   7.8        3.7    6.6   3.2    1.9  2  PF05549.6  Allexivirus 40kDa protein
        7.2    6.4  10.2        6.8    6.5   0.1    3.5  3  PF05377.6  Flagella accessory protein C (FlaC)
        7.9    6.2   9.5          3    7.6   0.1    3.1  3  PF06103.6  Bacterial protein of unknown function (DUF948)
        8.6    6.1  15.0       0.68    9.7   0.7    2.4  2  PF10146.4  Zinc finger-containing protein
        8.9    6.3  15.6        5.9    6.8   3.8    3.0  3  PF08702.5  Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.39   3.6e+02       4      28 ..      56      80 ..      53      85 .. 0.79
   2 ?   -1.4   0.0       1.9   1.7e+03      37      58 ..      94     115 ..      89     119 .. 0.76
   3 !   51.0   1.8   8.4e-17   7.7e-14       1      56 [.     220     275 ..     220     282 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.39
                HHHHHHHCCHHHHHHHHHHHHHHHH CS
  PF05739.14  4 eeleelessigeLkqlfldmgeeve 28
                +e+  + ++ +e+ q++  m + v+
  MMETSP1325-20131115|3989_1 56 KEISTIKRNAKEIDQMTETMMRSVS 80
                5788899999999999999876665 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14  37 Idnnvesassrverankrlkka 58 
                 + n + +++++++  +++l  +
  MMETSP1325-20131115|3989_1  94 LANIMSTTQGKIKTVKSHLESM 115
                 5666888899999988888766 PP

  == domain 3    score: 51.0 bits;  conditional E-value: 8.4e-17
                 HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14   1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlk 56 
                 e+ +e+++le+s+ e  q+f dm+ +ve+Qge+ld+I+++v +a++ ++ +n  l 
  MMETSP1325-20131115|3989_1 220 EQYDEVKKLEASVAEMTQMFVDMALLVEAQGEILDNIEEHVLNAKEMTDAGNVDLE 275
                 7999***********************************************99886 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   4.8   3.6e-12   3.2e-09       1     101 [.      43     149 ..      43     151 .. 0.89
   2 ?   -0.9   0.0       1.8   1.7e+03      17      29 ..     216     228 ..     182     270 .. 0.68

  Alignments for each domain:
  == domain 1    score: 36.7 bits;  conditional E-value: 3.6e-12
  PF00804.20   1 smseffeqveeIrgeiekisekveelkrlhsrilaspdpd.....kqtkeeleeltaeikklankirskLksleqsie.qeegqnrssadlrirktqhstlsrkFke 101
                 +m eff+ ve++++ei++i+ + +e++++ +    s  ++     ++ +++l +++  ++ +++ ++s L+s++ + +  + +++ + +++rir++ h++l  kF+ 
  MMETSP1325-20131115|3989_1  43 FMAEFFKTVESVKKEISTIKRNAKEIDQMTETMMRSVSASgskeeTEASKRLANIMSTTQGKIKTVKSHLESMKATTAeLDGQKKLQVQEVRIRENLHKSLVGKFMS 149
                 699***************************88888888556667799*****************************88455556667899***************86 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 1.8
  PF00804.20  17 ekisekveelkrl 29 
                 e+  e+ +e+k+l
  MMETSP1325-20131115|3989_1 216 ESAVEQYDEVKKL 228
                 3333444444333 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.9   0.00022       0.2       5      90 ..      47     127 ..      44     136 .. 0.88
   2 ?    4.0   0.4     0.054        49      48      81 ..     205     238 ..     183     244 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00022
   PF10046.4   5 fkkiskyveaeleisaedlklLeklNeataekykeleqkakslekeleklkqkyeelkpylqqideieeqvtkLeeavkeLDeysk 90 
                 f k+ + v++e+++++ + k + ++ e++++ +     +a++ ++e+e+ k++ + +++   +i+ ++++++++ +++ eLD   k
  MMETSP1325-20131115|3989_1  47 FFKTVESVKKEISTIKRNAKEIDQMTETMMRSV-----SASGSKEETEASKRLANIMSTTQGKIKTVKSHLESMKATTAELDGQKK 127
                 557889999999************999999876.....6788899*************************************8655 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.054
   PF10046.4  48 ekeleklkqkyeelkpylqqideieeqvtkLeea 81 
                 ++ + + k+ ye+  ++ ++++++e++v++++++
  MMETSP1325-20131115|3989_1 205 KSAATEVKAAYESAVEQYDEVKKLEASVAEMTQM 238
                 5667788999999999999999999999999875 PP

>> PF02346.11  Chordopoxvirus fusion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.8   2.5e+03      13      22 ..      54      63 ..      44      76 .. 0.45
   2 ?    3.8   0.1     0.038        35      19      55 ..      93     131 ..      88     132 .. 0.80
   3 ?    6.0   0.0    0.0078       7.1       2      38 ..     224     260 ..     223     262 .. 0.95

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 2.8
  PF02346.11 13 lekkfqtivk 22
                ++k+  ti  
  MMETSP1325-20131115|3989_1 54 VKKEISTIKR 63
                2222222222 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.038
  PF02346.11  19 tivkcckrleealkRLEnHletlRkamlnL..akKIDvQ 55 
                  +++ +++++  +k +  Hle++ ++  +L  +kK  vQ
  MMETSP1325-20131115|3989_1  93 RLANIMSTTQGKIKTVKSHLESMKATTAELdgQKKLQVQ 131
                 567778999999999********9988777446888887 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.0078
  PF02346.11   2 rlkdlekrllvlekkfqtivkcckrleealkRLEnHl 38 
                 ++k+le  +  +++ f +++   + ++e+l+ +E H+
  MMETSP1325-20131115|3989_1 224 EVKKLEASVAEMTQMFVDMALLVEAQGEILDNIEEHV 260
                 5899********************************6 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   2.1   0.00012      0.11      70     147 ..      53     125 ..      46     134 .. 0.83
   2 ?    0.8   0.2      0.44     4e+02      23      55 ..     206     237 ..     179     272 .. 0.61

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00012
   PF13094.1  70 nakalererkeesknlhpvlqelesevleenalaekedlklseknleptldeellellkqlnkhleslqgnlaqlegl 147
                  +k++ +++k+  k+++++  + +++v+ +  + e e      ++   +++  ++  +k  ++hles+++ +a+l+g 
  MMETSP1325-20131115|3989_1  53 SVKKEISTIKRNAKEIDQMTETMMRSVSASGSKEETEA-----SKRLANIMSTTQGKIKTVKSHLESMKATTAELDGQ 125
                 57889999999999999999999999999966666555.....45555667799999****************99875 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.44
   PF13094.1  23 eqllqekralerqlaaelksielLqeeirreea 55 
                 +++++ k+a e+ ++   + + +L++ ++++++
  MMETSP1325-20131115|3989_1 206 SAATEVKAAYESAVE-QYDEVKKLEASVAEMTQ 237
                 344444444444444.44444444444444433 PP

>> PF13292.1  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   1.2       0.3   2.7e+02     174     194 ..      67      87 ..      38     158 .. 0.50
   2 ?   11.5   0.8   9.7e-05     0.089     158     261 ..     167     267 ..     162     274 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.3
   PF13292.1 174 sisenvgalskylaklreska 194
                  i++ + ++ +++++  ++++
  MMETSP1325-20131115|3989_1  67 EIDQMTETMMRSVSASGSKEE 87 
                 222222222222222222211 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 9.7e-05
   PF13292.1 158 gelkkklivilNdNemsisenvgalskylaklreskayeklkkevkkvlkklkklkelakkleeslkelvpnlfeelglkyigpidGhdleelikvleevkklk 261
                 g++k+++++++ d +    +nv a +  ++kl e+  ++++ +evk++ +++ + ++ +kkle s++e+ +++f ++ l  +   +G+ l+++ + + ++k+++
  MMETSP1325-20131115|3989_1 167 GKVKRQVMIVVPDANDEFVNNVMAQEGGVQKLYEEVIMKSAATEVKAAYESAVEQYDEVKKLEASVAEM-TQMFVDMAL--LVEAQGEILDNIEEHVLNAKEMT 267
                 678999999999999999999999899999999988889999999988887777888889999999999.678877665..56777888888877777777765 PP

>> PF10303.4  Protein of unknown function (DUF2408)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   3.0    0.0051       4.6      36     101 ..      51     116 ..      35     141 .. 0.61
   2 ?    2.3   0.1      0.17   1.5e+02      29      75 ..     210     256 ..     168     264 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0051
   PF10303.4  36 keelaeelkklkeeLkeieskrdedGkFvssetgkvlekgqevlngllddCnnliedlseqkneel 101
                  e++++e++++k++ kei+++ ++ ++ vs++  k++ ++++ l++++ + +  i+ ++ + ++ +
  MMETSP1325-20131115|3989_1  51 VESVKKEISTIKRNAKEIDQMTETMMRSVSASGSKEETEASKRLANIMSTTQGKIKTVKSHLESMK 116
                 367777777777777777777777777777776666666666666666666555555555544422 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.17
   PF10303.4  29 sakkeksk.eelaeelkklkeeLkeieskrdedGkFvssetgkvlekg 75 
                 + k+  ++  e  +e+kkl++ ++e+ ++  +d+  + + +g++l+++
  MMETSP1325-20131115|3989_1 210 EVKAAYESaVEQYDEVKKLEASVAEMTQMF-VDMALLVEAQGEILDNI 256
                 222221112444566777777777777766.66665555556666655 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.7    0.0004      0.36      98     176 ..      57     141 ..      34     142 .. 0.78
   2 ?    2.0   0.6      0.22     2e+02      76     111 ..     196     237 ..     144     284 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0004
   PF03234.9  98 sveeeeeeqpkynemledLldqv.....kdevdekk.aaklieelkkhrkklkkeekelekkleelekeekkkitsedihtgfdk 176
                   ++ +++  + ++m e++++ v     k+e++++k  a++++  + + k +k++ ++++   +el  ++k ++  + i++   k
  MMETSP1325-20131115|3989_1  57 EISTIKRNAKEIDQMTETMMRSVsasgsKEETEASKrLANIMSTTQGKIKTVKSHLESMKATTAELDGQKKLQVQEVRIRENLHK 141
                 34566788899999999999999998886666666668999999999999************************99999887665 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.22
   PF03234.9  76 eelssekvlkklneeadkedka......sveeeeeeqpkyne 111
                 ++l +e ++k+++ e ++  ++       v++ e   +++++
  MMETSP1325-20131115|3989_1 196 QKLYEEVIMKSAATEVKAAYESaveqydEVKKLEASVAEMTQ 237
                 222333334433333333322223322223333333333333 PP

>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.2   0.00082      0.75     160     194 ..      36      70 ..      34      77 .. 0.92
   2 ?    4.1   1.8     0.017        15     255     334 ..      83     162 ..      72     191 .. 0.80
   3 ?    0.8   0.4      0.17   1.5e+02     329     365 ..     204     241 ..     142     247 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00082
                 HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02181.18 160 eRleallfksefeeeveelkrkletleaaseeLre 194
                 +R+ + +f++ef ++ve++k+++ t+++  +e+ +
  MMETSP1325-20131115|3989_1  36 TRMAMPKFMAEFFKTVESVKKEISTIKRNAKEIDQ 70 
                 699999*************************9976 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.017
                 TSGGGGGHHHHTTTHHHCCTS-HHHHHHHHHHHHHHHHHHHHHHHCHHTTSSTT-THHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02181.18 255 klpevldlsselsnvekaakvdleelekdvkklekglkklekelekseekeeesdkfvekleefleeaeeklkkleeelk 334
                 + +e  + s++l+n+ ++ + +++++++ +++++  + +l  + + + ++  ++++++++l   + +a   +k+ ++ ++
  MMETSP1325-20131115|3989_1  83 GSKEETEASKRLANIMSTTQGKIKTVKSHLESMKATTAELDGQKKLQVQEVRIRENLHKSLVGKFMSAVDTYKNAQTRYQ 162
                 66788888999999999999999999999999999999999988888888888888888888888888888877776654 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.17
                 HHHHHHHHHHHHHHHHHHS---TT.CCHHHHHHHHHHH CS
  PF02181.18 329 leeelkeakelfkelteYfgedpk.evspeeffkilre 365
                 +++  +e+k  +++++e ++e +k e+s  e+++ + +
  MMETSP1325-20131115|3989_1 204 MKSAATEVKAAYESAVEQYDEVKKlEASVAEMTQMFVD 241
                 34455556666666666665555555555555555555 PP

>> PF06013.7  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.0    0.0085       7.7       7      75 ..      52     120 ..      49     125 .. 0.81
   2 ?    4.6   0.3     0.032        29      12      40 ..      90     118 ..      85     162 .. 0.74
   3 ?   -1.5   0.0       2.6   2.4e+03      49      68 ..     147     166 ..     144     171 .. 0.69
   4 ?    0.9   0.2      0.44     4e+02      21      37 ..     219     235 ..     203     262 .. 0.56

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0085
   PF06013.7   7 eelrqaakrfqkaaeelesilqrlkaqidalqsgWsGaaadafqaafeewkqaaeklveaLeeisealk 75 
                 e + + +++++++a+e+ ++ +++++++ a +s  + +a+++ ++ +   + ++++++  Le+++ ++ 
  MMETSP1325-20131115|3989_1  52 ESVKKEISTIKRNAKEIDQMTETMMRSVSASGSKEETEASKRLANIMSTTQGKIKTVKSHLESMKATTA 120
                 667778888999999999999999999999999888888888888888888888888888888887765 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.032
   PF06013.7  12 aakrfqkaaeelesilqrlkaqidalqsg 40 
                 a+kr++++ ++ +++++++k+++++++++
  MMETSP1325-20131115|3989_1  90 ASKRLANIMSTTQGKIKTVKSHLESMKAT 118
                 56666666666666666666666666443 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 2.6
   PF06013.7  49 fqaafeewkqaaeklveaLe 68 
                 f +a + +k+a+++++++L+
  MMETSP1325-20131115|3989_1 147 FMSAVDTYKNAQTRYQTELT 166
                 55666677777777777765 PP

  == domain 4    score: 0.9 bits;  conditional E-value: 0.44
   PF06013.7  21 eelesilqrlkaqidal 37 
                  e  +++++l+a+++++
  MMETSP1325-20131115|3989_1 219 VEQYDEVKKLEASVAEM 235
                 33333333333333333 PP

>> PF05549.6  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   3.2    0.0041       3.7      74     144 ..      52     122 ..      42     143 .. 0.80
   2 ?   -0.7   0.0       0.7   6.4e+02      92     137 ..     197     242 ..     162     282 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0041
   PF05549.6  74 lsqttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsssetse 144
                  s ++++s ++ + ++++++ +++ +  + +  ++et+ +++l++ +++ + ++++++ +l+ + +++++ 
  MMETSP1325-20131115|3989_1  52 ESVKKEISTIKRNAKEIDQMTETMMRSVSASGSKEETEASKRLANIMSTTQGKIKTVKSHLESMKATTAEL 122
                 56677899999************999999999999999999999999999999****99998887765544 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.7
   PF05549.6  92 klldklksvekklelsaetasdskllkklesietsleelhakldel 137
                 kl +++  ++  +e +a  +s  +  ++++ +e s+ e+ + + ++
  MMETSP1325-20131115|3989_1 197 KLYEEVIMKSAATEVKAAYESAVEQYDEVKKLEASVAEMTQMFVDM 242
                 4444444444444444444444444455555555555555444443 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1    0.0075       6.8      15      40 ..      50      75 ..      39      79 .. 0.69
   2 ?    4.9   0.2     0.024        22       7      34 ..      96     123 ..      91     132 .. 0.76
   3 ?   -0.7   0.3       1.3   1.2e+03       2      14 ..     225     237 ..     201     266 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0075
   PF05377.6 15 vvatvrkeleelsksvekikenvkdv 40
                +v++v+ke++ ++ +  +i++    +
  MMETSP1325-20131115|3989_1 50 TVESVKKEISTIKRNAKEIDQMTETM 75
                47888888888888777777765554 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.024
   PF05377.6   7 nklsklstvvatvrkeleelsksvekik 34 
                 n +s  + +++tv++ le+++++  +++
  MMETSP1325-20131115|3989_1  96 NIMSTTQGKIKTVKSHLESMKATTAELD 123
                 445555556************9877665 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1.3
   PF05377.6   2 ideLEnklsklst 14 
                 +++LE  + +++ 
  MMETSP1325-20131115|3989_1 225 VKKLEASVAEMTQ 237
                 3344444444433 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1    0.0032         3      25      63 ..      41      79 ..      35      85 .. 0.80
   2 ?    2.8   0.6       0.1        95      22      52 ..      92     122 ..      85     135 .. 0.58
   3 ?   -0.7   0.1       1.3   1.2e+03      41      60 ..     234     253 ..     198     269 .. 0.54

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0032
   PF06103.6 25 kktldevnktvkkltkqvdgitketeellaktnelleDv 63
                 k ++e  ktv++++k++ +i+++++e+ + t++++  v
  MMETSP1325-20131115|3989_1 41 PKFMAEFFKTVESVKKEISTIKRNAKEIDQMTETMMRSV 79
                567888889999999999999999999988888877665 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.1
   PF06103.6  22 kklkktldevnktvkkltkqvdgitketeel 52 
                 k+l++++++++  +k+++++++  +  t el
  MMETSP1325-20131115|3989_1  92 KRLANIMSTTQGKIKTVKSHLESMKATTAEL 122
                 4455555555555555555555555555444 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1.3
   PF06103.6  41 qvdgitketeellaktnell 60 
                 ++ +   ++  l++ + e+l
  MMETSP1325-20131115|3989_1 234 EMTQMFVDMALLVEAQGEIL 253
                 22222333334444444444 PP

>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   4.9      0.34   3.1e+02      32     122 ..      42     136 ..      37     190 .. 0.70
   2 ?    9.7   0.7   0.00075      0.68      66     129 ..     201     264 ..     194     284 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.34
   PF10146.4  32 kllkeykkeleeLlkEkmsHvEelrqihaDindlEniikqs..eeeke..krl.ekinrlyeeylrlkeeidekrkeylglekLpeleeeegskis 122
                 k+++e  k++e ++kE      + + i++  +++ + +  s  +ee e  krl ++++ + ++++ +k++++++++++  l+  ++l+  e ++i 
  MMETSP1325-20131115|3989_1  42 KFMAEFFKTVESVKKEISTIKRNAKEIDQMTETMMRSVSASgsKEETEasKRLaNIMSTTQGKIKTVKSHLESMKATTAELDGQKKLQVQE-VRIR 136
                 7788888888888888888888888888888888877754322444331133314445667889999999999999988877777776666.4444 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00075
   PF10146.4  66 EniikqseeekekrlekinrlyeeylrlkeeidekrkeylglekLpeleeeegskiskdrfeka 129
                 E i+k++ +e +   e+++  y+e+++l  ++ e+ + +  +  L e + e + +i+++ ++ +
  MMETSP1325-20131115|3989_1 201 EVIMKSAATEVKAAYESAVEQYDEVKKLEASVAEMTQMFVDMALLVEAQGEILDNIEEHVLNAK 264
                 56789999******************************99999999999999999997777644 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.8    0.0065       5.9      30     110 ..      43     116 ..      33     136 .. 0.62
   2 ?    1.6   2.8      0.27   2.4e+02      32     114 ..      88     170 ..      84     205 .. 0.66
   3 ?    4.1   0.3     0.047        43      36      96 ..     223     283 ..     208     291 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0065
                 CCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  30 yekdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLq 110
                    ++ k++e++++++ +++++ kei++++++++ s+    ++++       + sk l +++  + + ki + +s+++ ++
  MMETSP1325-20131115|3989_1  43 FMAEFFKTVESVKKEISTIKRNAKEIDQMTETMMRSVSASGSKEE------TEASKRLANIM-STTQGKIKTVKSHLESMK 116
                 556677899999999999999999999999999998766554422......23344444444.334444444444444433 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.27
                 CCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  32 kdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLqevlr 114
                 ++ +k++ ++ ++ +   ++ k+  e +k+++ +l +++k + ++  i ++++ksl  k +  +++ ++aq +   +L+  ++
  MMETSP1325-20131115|3989_1  88 TEASKRLANIMSTTQGKIKTVKSHLESMKATTAELDGQKKLQVQEVRIRENLHKSLVGKFMSAVDTYKNAQTRYQTELTGKVK 170
                 55555555555555555555555555555566666666666666666666666766666666666666666665555555555 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.047
                 HHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  36 kkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiilile 96 
                  +++kle +++++++   ++  lv++  e+l + +++  + +++ +a + +le  i +++ 
  MMETSP1325-20131115|3989_1 223 DEVKKLEASVAEMTQMFVDMALLVEAQGEILDNIEEHVLNAKEMTDAGNVDLEASISYQKS 283
                 57999**************************999999999999999999999999944433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1790  (0.130925); expected 273.4 (0.02)
Passed bias filter:                      576  (0.0421299); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.90u 0.34s 00:00:01.24 Elapsed: 00:00:00.61
# Mc/sec: 1213.89
//
Query:       MMETSP1325-20131115|3994_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-13   49.8   0.0    2.6e-13   49.4   0.0    1.1  1  PF06414.7 Zeta toxin
    1.1e-05   25.2   0.1    1.5e-05   24.7   0.0    1.2  1  PF13671.1 AAA domain
  ------ inclusion threshold ------
      0.017   15.3   0.0      0.026   14.7   0.0    1.2  1  PF13238.1 AAA domain


Domain annotation for each model (and alignments):
>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0   5.7e-17   2.6e-13      47     177 ..       2     128 ..       1     149 [. 0.84

  Alignments for each domain:
  == domain 1    score: 49.4 bits;  conditional E-value: 5.7e-17
   PF06414.7  47 ridaDelrkyhpayrelekkdpkeaseltqkdaselveklidralekgyniilegtlrspdkarkiarklkkagykvevvivavpkelSelgilqRyeeelaekgeg.Rrvpkevhdeayeglpesvealea 177
                 ++d+D +r ++p+  +  ++d ++a +lt+k+++ ++e l+ +ale g+n++++g lr+ ++     +kl++   ++ ++i   +   S + +l+R  +++a      R +p+e+   + +++p sv++l  
  MMETSP1325-20131115|3994_1   2 VVDPDAIRYQLPETPSYVERDTATAGSLTHKESGYIAELLTLQALELGKNVVVDGSLRDAEWHATYFDKLRQSYPTIRIAI--LHVTASPEEVLKRAARRAAT---TrREIPRETLLSTIDQVPLSVRTLTP 128
                 58*********************************************************************9444555555..45567889999999999444...44********************9876 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   3.3e-09   1.5e-05      29     134 ..       4     113 ..       1     119 [. 0.68

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 3.3e-09
   PF13671.1  29 sqdtlrkrlfg....tdqqsktdytrvlkrlyqilnklarkalsagrsvivdatnlsr.eerarfvklakrlg.vpvrivylevpeetlreRlakRerngddrsevpeeald 134
                 + d++r +l +     ++++ t  + ++k+  +i + l  +al+ g++v+vd  ++++ ++   f+kl +++   +++i+++++++e+  +R a+R+++  +r e p e+l 
  MMETSP1325-20131115|3994_1   4 DPDAIRYQLPEtpsyVERDTATAGSLTHKESGYIAELLTLQALELGKNVVVDGSLRDAeWHATYFDKLRQSYPtIRIAILHVTASPEEVLKRAARRAAT--TRREIPRETLL 113
                 5566666665533322222222222233334445555666899**************9566678888888665245999*******************7..56678888775 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   5.7e-06     0.026      69     118 ..      45     105 ..      16     113 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 5.7e-06
   PF13238.1  69 elaegenviidghlaeleledlkdlkl...........vvLradpeelarRlekRgrkeek 118
                 +l+ g+nv++dg l++ e ++ ++ kl            +++a+pee ++R ++R  + ++
  MMETSP1325-20131115|3994_1  45 ALELGKNVVVDGSLRDAEWHATYFDKLrqsyptiriaiLHVTASPEEVLKRAARRAATTRR 105
                 567799***********988887777789**************************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1327.58
//
Query:       MMETSP1325-20131115|3992_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.33s 00:00:00.85 Elapsed: 00:00:00.73
# Mc/sec: 758.30
//
Query:       MMETSP1325-20131115|3998_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   11.7   0.1       0.54    9.7   0.0    1.9  2  PF02954.14 Bacterial regulatory protein, Fis family


Domain annotation for each model (and alignments):
>> PF02954.14  Bacterial regulatory protein, Fis family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.08   1.1e+03      32      38 ..       6      12 ..       4      12 .. 0.84
   2 ?    9.7   0.0     4e-05      0.54      10      29 ..      16      35 ..      15      37 .. 0.95

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.08
                HHHH... CS
  PF02954.14 32 RrtLyrK 38
                +r L++K
  MMETSP1325-20131115|3998_1  6 PRALAYK 12
                899*999 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 4e-05
                HHHHHHT----HHHHHHH-- CS
  PF02954.14 10 IeaALertgGnisrAArlLG 29
                +e++L++  + ++r+A lLG
  MMETSP1325-20131115|3998_1 16 LEEVLQKLSWTMARCAVLLG 35
                799****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:01.04
# Mc/sec: 131.34
//
Query:       MMETSP1325-20131115|3996_1  [L=715]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-81  271.3   0.2    1.2e-80  270.9   0.2    1.2  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  270.9   0.2   8.9e-85   1.2e-80       2     315 ..     403     714 ..     402     715 .] 0.93

  Alignments for each domain:
  == domain 1    score: 270.9 bits;  conditional E-value: 8.9e-85
                 HHHHHHT-TT---E.ESSTT---EEE-TT-......----TTHHHHHHH-------TTT--------B-HHHHHHHT.T----CCHHHTT-HHHHHHHHHHH..HS--GG...GT-BSEE.EEE----EEEEES-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----...TTSHHHHHHHHHHHT.S-HHHHHHHHHHH----S------TT--......--EEEEE--.-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT.----- CS
  PF00632.20   2 llskellnpklglf.yvyessgllypnkplsrdsdleessndnlklfkflGkligkaiyegilldlpfsraflkflllgkkvtledleeidpelanslkellelessteavedlaltFtieedkkedeielvelipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggyn...ansptienlweilke.fspeerrlfLkFvTGssrlPlgGfaelh......pkftivrksededrLPtasTCfnyLkLpdYsskeilkekLltAieegqegFel 315
                 l+s+ l++p+  lf y+  ++  +++n++      +   ++++lk+f+f G+l+gka+++++++++++  +++k++l   ++ ++dle +d++++++l +l     ++++ve l+l+Ft++e+   +e+++v l+++G+n+ Vtn+n+eeYi+l ++y+l ++vk+q++ ++ Gf+evip+ +l++f+ +elell+cG ++ i+++d+ +n ey+g y+   an+++++++we++++ f+ e+r+++L+F+TG+s +P++Gfa l+      +kfti+  s++ + +P a+TCfn+++Lp Y+sk+ lk+ L++Ai+   +gF++
  MMETSP1325-20131115|3996_1 403 LVSEHLFDPQIALFtYSAINQMCMQINPN------SGLCNEEHLKMFHFCGRLLGKALFDRQIVSSHLVAPLYKHIL-SWPLLMNDLEALDSDVYQNLVKLG----DIDDVEMLCLDFTVTENA-MGEVQQVSLKEGGENVTVTNDNIEEYIRLQCTYRLLDRVKEQTKYLLLGFYEVIPEPLLSVFDFQELELLLCGLPD-INTDDWLQNSEYTGDYErkgANHKVVKWFWEVVRDdFTMEQRARLLQFTTGTSGVPASGFAMLQgndgniRKFTINSISKSVSIFPRAHTCFNRIDLPLYDSKKELKKFLTMAIQMEATGFDI 714
                 7899999*******322223333444433......23344579**********************************.99*********************9....8889*********97665.789999**********************************************************************.*****************999***********************************************************99999*********************************9***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (715 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.03u 0.37s 00:00:01.40 Elapsed: 00:00:00.65
# Mc/sec: 2635.99
//
Query:       MMETSP1325-20131115|3999_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 601.53
//
Query:       MMETSP1325-20131115|4001_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   14.2   5.0      0.045   13.4   3.5    1.6  1  PF11577.3  NF-kappa-B essential modulator NEMO
      0.025   14.4   6.3      0.026   14.3   4.4    1.0  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein
      0.033   13.4   1.5      0.033   13.4   1.0    1.1  1  PF05791.6  Bacillus haemolytic enterotoxin (HBL)
      0.044   14.0   5.2      0.054   13.7   3.6    1.1  1  PF02895.9  Signal transducing histidine kinase, homodimeric domain
      0.055   12.3   7.0      0.059   12.2   4.8    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
      0.067   12.7   2.4       0.11   12.1   1.6    1.3  1  PF07870.6  Protein of unknown function (DUF1657)
       0.09   13.0   4.2       0.13   12.4   2.9    1.2  1  PF06156.8  Protein of unknown function (DUF972)
      0.093   11.5   2.1      0.098   11.4   1.4    1.0  1  PF07817.8  GLE1-like protein
       0.11   12.3   2.6       0.13   12.1   1.8    1.1  1  PF03819.12 MazG nucleotide pyrophosphohydrolase domain
       0.11   12.4   4.9       0.12   12.3   3.4    1.0  1  PF10774.4  Domain of unknown function (DUF4226)
       0.12   12.0   9.9       0.13   11.9   6.9    1.1  1  PF12329.3  TATA element modulatory factor 1 DNA binding
       0.13   11.9   4.2       0.14   11.9   2.9    1.1  1  PF05812.7  Herpesvirus BLRF2 protein
       0.18   11.7   6.1       0.23   11.4   4.2    1.2  1  PF05103.8  DivIVA protein
        0.2   10.9   6.3        0.2   10.8   4.4    1.0  1  PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
        0.2   11.2   7.5       0.34   10.5   5.1    1.4  1  PF01920.15 Prefoldin subunit
       0.22   10.5   4.7       0.22   10.5   3.3    1.0  1  PF10234.4  Clusterin-associated protein-1
       0.25   11.4   2.1       0.27   11.3   1.5    1.2  1  PF11594.3  Mediator complex subunit 28
       0.27   10.5   7.5       0.36   10.1   5.2    1.3  1  PF00038.16 Intermediate filament protein
       0.28   10.6   9.3       0.29   10.6   6.4    1.0  1  PF04156.9  IncA protein
       0.28   11.0   7.2       0.44   10.4   5.0    1.3  1  PF00170.16 bZIP transcription factor
        0.3   10.4   6.2       0.31   10.4   4.3    1.0  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
       0.32   10.7   8.7       0.36   10.5   6.1    1.0  1  PF07321.7  Type III secretion protein YscO
       0.37   10.4   8.6       0.42   10.2   6.0    1.0  1  PF08614.6  Autophagy protein 16 (ATG16)
        0.4   10.5   5.3       0.46   10.3   3.7    1.2  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.48    9.5   7.2        0.5    9.4   5.0    1.0  1  PF11932.3  Protein of unknown function (DUF3450)
       0.48   10.6   8.6       0.66   10.2   5.9    1.2  1  PF06005.7  Protein of unknown function (DUF904)
       0.51    8.8   5.7       0.49    8.8   3.9    1.0  1  PF08317.6  Spc7 kinetochore protein
       0.64    9.8   4.1        1.3    8.9   1.1    2.0  2  PF05377.6  Flagella accessory protein C (FlaC)
       0.66    9.7   7.3        0.7    9.6   5.1    1.0  1  PF11559.3  Afadin- and alpha -actinin-Binding
       0.69   10.2   6.2       0.84   10.0   4.3    1.1  1  PF13600.1  N-terminal domain of unknown function (DUF4140)
       0.75    9.6   9.2       0.96    9.2   6.4    1.2  1  PF13863.1  Domain of unknown function (DUF4200)
       0.77    9.0   3.6        0.8    9.0   2.5    1.1  1  PF05529.7  B-cell receptor-associated protein 31-like
        1.3    9.3   6.5        2.3    8.5   4.5    1.5  1  PF14357.1  Domain of unknown function (DUF4404)
        1.6    8.3   5.7        3.7    7.2   3.6    1.9  2  PF02183.13 Homeobox associated leucine zipper
        1.7    8.1   7.6       0.76    9.3   1.4    1.9  2  PF02996.12 Prefoldin subunit
        2.7    7.3   7.3        2.9    7.2   5.1    1.0  1  PF01025.14 GrpE
        3.7    7.1   6.6          4    7.0   4.6    1.2  1  PF08286.6  Spc24 subunit of Ndc80
        4.7    7.0   7.0        5.1    6.9   4.8    1.1  1  PF10779.4  Haemolysin XhlA
        6.6    6.1  11.1        2.8    7.3   3.7    2.0  2  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF11577.3  NF-kappa-B essential modulator NEMO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.5   0.00013     0.045      11      41 ..      16      46 ..       2      53 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 0.00013
   PF11577.3 11 lleenhdLkealkqsNqamKeRfEeLlkwqe 41
                l een++Lkea++ +  +m    EeL   + 
  MMETSP1325-20131115|4001_1 16 LEEENRELKEAIEEQDSQMEASTEELNDIRT 46
                5689********************9987765 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   4.4   7.5e-05     0.026      33      80 ..       3      50 ..       1      53 [. 0.90

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 7.5e-05
                ---HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF07200.8 33 neekeellaqnesLaeenlekepqleelkaqlqdkleelkkleekyee 80
                + e ++ll++  sL+een e+++ +ee+ +q+++ +eel+ +  ++++
  MMETSP1325-20131115|4001_1  3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQA 50
                568899*********************************999888775 PP

>> PF05791.6  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.0   9.5e-05     0.033     105     142 ..      13      50 ..       5      55 .] 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 9.5e-05
   PF05791.6 105 ketlkeglekLqeeiqknqkevkqlleeLkafknklak 142
                 ++ l e+  +L+e i ++  ++++  eeL++++++++ 
  MMETSP1325-20131115|4001_1  13 QASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQA 50 
                 56778888889999999999999999999999988876 PP

>> PF02895.9  Signal transducing histidine kinase, homodimeric domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   3.6   0.00016     0.054      21      64 ..       9      51 ..       5      53 .. 0.94

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 0.00016
   PF02895.9 21 LvitkarleqlldelreeglkasdeelkealqqlerisreLqea 64
                L +++a+le+  +el+ e ++++d ++++++++l++i +++q a
  MMETSP1325-20131115|4001_1  9 LLTEQASLEEENRELK-EAIEEQDSQMEASTEELNDIRTQIQAA 51
                6789************.999**********************87 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   4.8   0.00017     0.059      54     102 ..       2      50 ..       1      53 [. 0.94

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00017
   PF10186.4  54 kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaq 102
                 k++++q l +e+as +e+++++++ ie++ +++e+  e+++  + +++ 
  MMETSP1325-20131115|4001_1   2 KQRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQA 50 
                 57899***************************************99985 PP

>> PF07870.6  Protein of unknown function (DUF1657)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.6    0.0003      0.11      17      47 ..      12      42 ..       6      43 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.0003
   PF07870.6 17 etfaLdTddeeAKqmYeqaaeqleevindLk 47
                e+ +L+ +++e+K++ e+   q+e  +++L+
  MMETSP1325-20131115|4001_1 12 EQASLEEENRELKEAIEEQDSQMEASTEELN 42
                678************************9998 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   2.9   0.00037      0.13      29      65 ..       4      40 ..       2      54 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00037
   PF06156.8 29 kelkelleenaelkleneklrerleeleeeekkkekk 65
                +el++ll e+a+l+ en++l+e +ee++++ ++++++
  MMETSP1325-20131115|4001_1  4 RELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEE 40
                6789999999999999999999999987733333222 PP

>> PF07817.8  GLE1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.4   0.00028     0.098       9      57 ..       3      51 ..       1      54 [. 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00028
                HHHTHHHHHS-HHHHHHHHHHHHHHGGG-----SBHHHHHHHHHHHHHH CS
   PF07817.8  9 ksalkellkkdkelkklraelkrkinpkvgqlsnsesqlkkiteklsql 57
                + +l+ ll ++++l++ + elk +i+ + +q+ +s+++l++i +++++ 
  MMETSP1325-20131115|4001_1  3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51
                67899999*************************************9976 PP

>> PF03819.12  MazG nucleotide pyrophosphohydrolase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.8   0.00037      0.13       1      43 [.       7      51 ..       7      54 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00037
                --HHHHHHHHHHHHHHHHHHHHTT-HH..HHHHH---HHHHHHHH CS
  PF03819.12  1 qtlesllaylleEvgEvaeaikkedrd..eleeELGDvLlqvlfl 43
                q+l++  a l eE  E+ eai+++d +  + +eEL D+ +q+   
  MMETSP1325-20131115|4001_1  7 QSLLTEQASLEEENRELKEAIEEQDSQmeASTEELNDIRTQIQAA 51
                6777888999***********998866557889999997776555 PP

>> PF10774.4  Domain of unknown function (DUF4226)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   3.4   0.00034      0.12      11      59 ..       4      51 ..       2      54 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00034
   PF10774.4 11 rareaaLarqhsalseadrqlveallsAhasavegrrrLdaiqqeieea 59
                r++++ L++q s l e +r+l ea+ +  +++  ++++L++i  +i++a
  MMETSP1325-20131115|4001_1  4 RELQSLLTEQAS-LEEENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51
                567888888877.57889****************************998 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   6.9   0.00038      0.13      18      64 ..       3      49 ..       1      54 [. 0.61

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00038
   PF12329.3 18 meEgekLskkelkhnntikkLrkknkelekeieelkkkleklekele 64
                ++E++ L  ++++++++ ++L++ ++e+++++e  +++l++  ++++
  MMETSP1325-20131115|4001_1  3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQ 49
                56666666666666666666666666666666666666666555555 PP

>> PF05812.7  Herpesvirus BLRF2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.9   0.00039      0.14       4      48 ..       5      48 ..       2      54 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00039
                CHHHHHHHHHHHHHHHHHHHHCHHH---..--TT--B--HHHHHH CS
   PF05812.7  4 tveeLaaelakLklENkaLkkklksstgpkespkdevLtprqkea 48
                +++ L +e a L+ EN++Lk+ +++++ ++ + + e+L++   ++
  MMETSP1325-20131115|4001_1  5 ELQSLLTEQASLEEENRELKEAIEEQD-SQMEASTEELNDIRTQI 48
                56778889999**************99.58888888888766655 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   4.2   0.00065      0.23      27      72 ..       6      51 ..       3      54 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00065
   PF05103.8 27 Ldqvikdyeallkeneelkeeieeleekleeykeleeslkkslvva 72
                L+ +  +  +l +en+elke iee ++++e   e  ++++ ++ +a
  MMETSP1325-20131115|4001_1  6 LQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51
                4445555556666666666666666666666666666666555555 PP

>> PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   4.4   0.00058       0.2      19      62 ..       8      51 ..       1      54 [. 0.88

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00058
   PF10018.4 19 keleehqenqarikeLraeaeslDeqikdilkeLkearkeLksl 62
                ++l e+ +++++ +eL++ +e+ D+q+ +  +eL+++r+ ++++
  MMETSP1325-20131115|4001_1  8 SLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51
                3578999********************************99986 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   5.1   0.00096      0.34      62     102 ..      11      51 ..       5      54 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00096
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC- CS
  PF01920.15  62 evkeeLeerketlekeiktlekqleklekeleelkeelykk 102
                 + ++ Lee+  +l++ i++ ++q+e   +el++++++++++
  MMETSP1325-20131115|4001_1  11 TEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51 
                 56788999999999999999999999999999999999975 PP

>> PF10234.4  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.3   0.00064      0.22     147     191 ..       3      47 ..       1      53 [. 0.87

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00064
   PF10234.4 147 kesrqkalsrplelaevekalkeaikelaeelqklkaelenlksd 191
                 + ++q+ l+++ +l+e ++ lkeai+e++++++ +++el+ ++ +
  MMETSP1325-20131115|4001_1   3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQ 47 
                 56788999999****************************998765 PP

>> PF11594.3  Mediator complex subunit 28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.5   0.00077      0.27      27      65 ..       2      41 ..       1      55 [] 0.65

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00077
   PF11594.3 27 KrleL.svlkfkkvlkEeaqklkeElqrkdqLvtKidski 65
                K+ eL s l  +  l+Ee+ +lke ++ +d  ++   +++
  MMETSP1325-20131115|4001_1  2 KQRELqSLLTEQASLEEENRELKEAIEEQDSQMEASTEEL 41
                778888999999***********88855554443322222 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   5.2     0.001      0.36     229     275 ..       3      49 ..       1      54 [. 0.62

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.001
  PF00038.16 229 eieleslkkqkeslerqlaeleerleeelkklqekiseleeelqelk 275
                 + el+sl+ +++sle++ +el+e +ee+ ++++++ +el++  ++++
  MMETSP1325-20131115|4001_1   3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQ 49 
                 55777888888888877777777777777666665555544333333 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   6.4   0.00082      0.29      94     141 ..       3      50 ..       1      55 [] 0.34

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00082
   PF04156.9  94 eeeleqleerlaeleseledleedlellqeelksleerlesleesike 141
                 ++el+ l +++a+le+e+++l+e+ e+  ++ ++  e+l +++ +i++
  MMETSP1325-20131115|4001_1   3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQA 50 
                 233333333333333333333333333333333333333333333333 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   5.0    0.0013      0.44      24      59 ..       2      37 ..       1      42 [. 0.85

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0013
                HHHHHHHHHHHHHHHHHHH.......HHHHHHHHHH CS
  PF00170.16 24 KkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
                K+ e++ L ++ ++Le+eN++Lk+ +ee   ++++ 
  MMETSP1325-20131115|4001_1  2 KQRELQSLLTEQASLEEENRELKEAIEEQDSQMEAS 37
                8999*******************9999887777655 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.3   0.00089      0.31      92     140 ..       3      49 ..       1      54 [. 0.75

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00089
   PF07106.8  92 kqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeank 140
                 ++e ++l +e+ +L++e    el+e i+e + ++e+  e+L++++ +++
  MMETSP1325-20131115|4001_1   3 QRELQSLLTEQASLEEEN--RELKEAIEEQDSQMEASTEELNDIRTQIQ 49 
                 567777888888888765..88888888888888888888888887765 PP

>> PF07321.7  Type III secretion protein YscO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   6.1     0.001      0.36      65     114 ..       2      51 ..       1      53 [. 0.95

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.001
   PF07321.7  65 llkeleklqqqvgllrekeaelesqlaeakqrleaererlrqarkqlqea 114
                 +++el  l  + ++l e ++el++ ++e+  + ea  e+l+  r q+q+a
  MMETSP1325-20131115|4001_1   2 KQRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51 
                 689*******************************************9987 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   6.0    0.0012      0.42     115     162 ..       3      50 ..       1      53 [. 0.70

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0012
   PF08614.6 115 ekelaelqseiksleeeikdleeelkekekaletlqDElaslnlelsl 162
                 ++el++l +e +sleee ++l+e+++e++ ++e    El  + +++++
  MMETSP1325-20131115|4001_1   3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQA 50 
                 567777777777777777777777777777777777777777777665 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.7    0.0013      0.46      68     104 ..      12      48 ..       1      54 [. 0.55

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0013
                 HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS CS
  PF02403.17  68 daeeliaevkelkeelkaleaelkeleaeleklllsi 104
                 + ++l +e +elke +++ + ++++ ++el+++ ++i
  MMETSP1325-20131115|4001_1  12 EQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQI 48 
                 3445555666666666666666666666666554444 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   5.0    0.0014       0.5      56     102 ..       3      49 ..       1      54 [. 0.69

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0014
   PF11932.3  56 laeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieetrq 102
                 ++e+++l +e+++l+  n++l++ +e+q++++++ +e++++i++  q
  MMETSP1325-20131115|4001_1   3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQ 49 
                 56777777777777777777777777777777777777777765444 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   5.9    0.0019      0.66      24      69 ..       3      48 ..       3      53 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0019
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTHHHHH---- CS
   PF06005.7 24 qmeieeLkeeneqlkeeneeLeeenkklkeereawqerlralLgkl 69
                q+e++ L +e+++l+een+eL+e ++   ++ ea +e l+ + +++
  MMETSP1325-20131115|4001_1  3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQI 48
                7899999999999999999999999999999999999998875555 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   3.9    0.0014      0.49     221     263 ..       9      51 ..       1      55 [] 0.42

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0014
   PF08317.6 221 leekieekrkkleeleeelqelkkkiealkekkselleeiaea 263
                 l  + ++ +++  el+e ++e + ++ea++e++++++++i++a
  MMETSP1325-20131115|4001_1   9 LLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51 
                 3333333334444444444444444444444444444444444 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.1    0.0036       1.3       8      34 ..       5      31 ..       3      36 .. 0.86
   2 ?    2.3   0.1      0.41   1.4e+02      19      31 ..      37      49 ..      29      54 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0036
   PF05377.6  8 klsklstvvatvrkeleelsksvekik 34
                +l +l t+ a++++e+ el++++e+ +
  MMETSP1325-20131115|4001_1  5 ELQSLLTEQASLEEENRELKEAIEEQD 31
                6778888999**************866 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.41
   PF05377.6 19 vrkeleelsksve 31
                  +el++++++++
  MMETSP1325-20131115|4001_1 37 STEELNDIRTQIQ 49
                4456666666665 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   5.1     0.002       0.7      87     131 ..       4      48 ..       1      54 [. 0.40

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.002
   PF11559.3  87 relallqekerqlekklktleqklknekeelqrlkniiqsiktqy 131
                 rel++l  ++++le ++++l++++ ++  ++      + +i+tq 
  MMETSP1325-20131115|4001_1   4 RELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQI 48 
                 344433444444444444444444444444444444444444333 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.3    0.0024      0.84      50      96 ..       6      51 ..       1      54 [. 0.70

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0024
   PF13600.1 50 vlsvsvrrrdlqekdadaaseelaeleaelraledelarleaekeal 96
                ++s+ ++ ++l+ +++++ +e+++e + +++a ++el+ ++ +++a+
  MMETSP1325-20131115|4001_1  6 LQSLLTEQASLE-EENRELKEAIEEQDSQMEASTEELNDIRTQIQAA 51
                556666666665.5677788888888888888888888888888776 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   6.4    0.0027      0.96      13      58 ..       3      48 ..       1      53 [. 0.66

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0027
   PF13863.1 13 qlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdn 58
                q++l++   e + +eee+ e +e++e+++++++ s ++ n++ ++ 
  MMETSP1325-20131115|4001_1  3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQI 48
                5667777777777777777777777777777777777777666554 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.5    0.0023       0.8     122     183 ..       9      48 ..       2      55 .] 0.42

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0023
   PF05529.7 122 lvselvkleeklealkkqaesatkaakklkeekekklkeeveklkkelee.......kekdlealkkqa 183
                 l++e+++lee++++l                             k+ +ee       ++++l+ +++q+
  MMETSP1325-20131115|4001_1   9 LLTEQASLEEENREL-----------------------------KEAIEEqdsqmeaSTEELNDIRTQI 48 
                 444444444444444.............................4444442222222444444444444 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   4.5    0.0065       2.3       2      60 ..      16      53 ..       2      55 .] 0.45

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0065
   PF14357.1  2 lrelLekLheeLeqtdsldeetraeLkelrddieealeeedaseaedeslaerlneave 60
                l+e+ ++L+e +e++ds  e++ +eL++                     ++ ++++a+e
  MMETSP1325-20131115|4001_1 16 LEEENRELKEAIEEQDSQMEASTEELND---------------------IRTQIQAAAE 53
                2223334444444444444444444444.....................4445555444 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   3.6      0.01       3.7      15      43 ..       7      35 ..       3      43 .. 0.84
   2 ?   -0.5   0.0       2.6   9.2e+02      26      37 ..      39      50 ..      33      54 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.01
  PF02183.13 15 daLkaendsLqkEkekLraevlsLkeklq 43
                 +L  e  sL++E+ +L+  ++++ ++++
  MMETSP1325-20131115|4001_1  7 QSLLTEQASLEEENRELKEAIEEQDSQME 35
                57888999999999999999999888775 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 2.6
  PF02183.13 26 kEkekLraevls 37
                +E +  r+++++
  MMETSP1325-20131115|4001_1 39 EELNDIRTQIQA 50
                466667777776 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   1.4      0.05        18       3      27 ..       4      28 ..       2      31 .. 0.62
   2 ?    9.3   1.4    0.0022      0.76      82     111 ..      23      52 ..      22      55 .] 0.81

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.05
                TTTHHHHHHHHHHHHHHHHHHHHHH CS
  PF02996.12  3 eeleslqaeleqlkeaieelektle 27
                +el+sl +e+++l+e+ +el++++e
  MMETSP1325-20131115|4001_1  4 RELQSLLTEQASLEEENRELKEAIE 28
                5666666666666666666666655 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0022
                 HHHHHHHHHHHHHHH---HHHHHHH---HH CS
  PF02996.12  82 lkkkleelekqlekleeeleklkdqittle 111
                 lk+ +ee ++q+e  +eel+++++qi+ ++
  MMETSP1325-20131115|4001_1  23 LKEAIEEQDSQMEASTEELNDIRTQIQAAA 52 
                 678888999999999999999999998765 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.1    0.0083       2.9       7      51 ..       6      50 ..       1      54 [. 0.69

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0083
  PF01025.14  7 eeeeedeeeeleeeleeleeevkelkdkllrllaefenlrkrtek 51
                 ++  +e+++leee  el+e ++e  ++++ + +e+  +r +++ 
  MMETSP1325-20131115|4001_1  6 LQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQIQA 50
                455556777788888888888888888888888888777777665 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.6     0.012         4      21      55 ..       5      39 ..       1      54 [. 0.39

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.012
   PF08286.6 21 elenlqseleelkeeleeleeqenegkeedeeeae 55
                el++l +e+++l+ee  el+e  +e++ + e+++e
  MMETSP1325-20131115|4001_1  5 ELQSLLTEQASLEEENRELKEAIEEQDSQMEASTE 39
                44444444444444444444444442222222211 PP

>> PF10779.4  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.8     0.014       5.1       5      49 ..       3      47 ..       1      51 [. 0.91

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.014
   PF10779.4  5 kerlnrietklkeeekaenalEkadaalekqiknlnkdLskIkkn 49
                +++l+ + t++ ++e++++ l  a + +++q +  +++L++I+  
  MMETSP1325-20131115|4001_1  3 QRELQSLLTEQASLEEENRELKEAIEEQDSQMEASTEELNDIRTQ 47
                6789999999999*****************************865 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   3.7     0.008       2.8      29      60 ..       2      30 ..       1      31 [. 0.76
   2 ?    4.4   1.1     0.067        23      18      43 ..      26      51 ..      25      54 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.008
  PF04977.10 29 lqaelaklkaeneeLeaevkdLksdedyieeq 60
                +q+el++l  e+++Le+e ++Lk   ++ieeq
  MMETSP1325-20131115|4001_1  2 KQRELQSLLTEQASLEEENRELK---EAIEEQ 30
                57788888888888888888885...778776 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.067
  PF04977.10 18 alyqlkqeiaalqaelaklkaeneeL 43
                a+ +++++++a ++el++++ ++++ 
  MMETSP1325-20131115|4001_1 26 AIEEQDSQMEASTEELNDIRTQIQAA 51
                57889999999999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1762  (0.128877); expected 273.4 (0.02)
Passed bias filter:                     1350  (0.098742); expected 273.4 (0.02)
Passed Vit filter:                       291  (0.0212844); expected 13.7 (0.001)
Passed Fwd filter:                        40  (0.00292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              39  [number of targets reported over threshold]
# CPU time: 0.48u 0.47s 00:00:00.95 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|4003_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 448.68
//
Query:       MMETSP1325-20131115|4002_1  [L=517]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.2    8.4   3.3       0.29   10.4   0.1    1.6  2  PF06035.6 Bacterial transglutaminase-like cysteine proteinase BTLCP


Domain annotation for each model (and alignments):
>> PF06035.6  Bacterial transglutaminase-like cysteine proteinase BTLCP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   0.5      0.77   1.1e+04      14      25 ..     240     251 ..     238     259 .. 0.63
   2 ?   10.4   0.1   2.1e-05      0.29       4      37 ..     354     387 ..     351     404 .. 0.87

  Alignments for each domain:
  == domain 1    score: -4.5 bits;  conditional E-value: 0.77
   PF06035.6  14 vefCkrnpkeCk 25 
                  +fCk+++++ k
  MMETSP1325-20131115|4002_1 240 SKFCKNHRTNRK 251
                 689998876533 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 2.1e-05
   PF06035.6   4 geatsaPighvefCkrnpkeCkakskeaekvklt 37 
                  +at  P g  +fC+++++eC  k++++++ +l+
  MMETSP1325-20131115|4002_1 354 LGATVLPXGKLSFCSAHREECIVKRETTKSXALE 387
                 678999******************9998888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.48s 00:00:01.16 Elapsed: 00:00:00.60
# Mc/sec: 2064.86
//
Query:       MMETSP1325-20131115|4005_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0017   16.8   0.1     0.0017   16.7   0.1    1.1  1  PF01490.13 Transmembrane amino acid transporter protein
     0.0039   16.1   1.4     0.0058   15.5   1.0    1.2  1  PF07466.6  Protein of unknown function (DUF1517)
  ------ inclusion threshold ------
      0.041   13.9  10.2      0.068   13.2   7.1    1.4  1  PF11928.3  Domain of unknown function (DUF3446)


Domain annotation for each model (and alignments):
>> PF01490.13  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   3.8e-07    0.0017     187     295 ..      48     156 ..      20     200 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 3.8e-07
  PF01490.13 187 kkasklkglflaigiivFAfeghavllpiqnelkdpskfkkmtkvlllsiilvtvlyilvGlvGYltFGnevkg...nillnlpkssilivivnvllvlalllsfplqlhpl 295
                 +++++ +glf++++iivF+      l  +   l+d ++      v++  ++ +++ly+++++++ + FG  v +   +   ++  ss+++v+v  + +l  l  +pl ++ l
  MMETSP1325-20131115|4005_1  48 APYFDTSGLFTTFSIIVFSQLMNVSLGMLLGALDDKRQLG---SVVVSGMCSTALLYATFAVIVGWYFGTYVDDssnVMWRSYTRSSFVRVVVEGFPALDTLSVYPLNAMIL 156
                 4789999**************999999********88866...8999999999***********99999888776636668999999*********9999999999998766 PP

>> PF07466.6  Protein of unknown function (DUF1517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   1.0   1.3e-06    0.0058      19      91 ..      16      83 ..       9      98 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.3e-06
   PF07466.6 19 ssssprssspsgggygsssssygggysgggfgfpflipifgfGggflglfgllilvaivgvlvnalrsaggge 91
                s+ s++sss+s+++++    s++ + s g++g     p+f   g  +  f+++++  +++v + +l +a   +
  MMETSP1325-20131115|4005_1 16 STASSSSSSSSSSSSS----SSSPSFSHGVIGTHPKAPYFDTSG-LFTTFSIIVFSQLMNVSLGMLLGALDDK 83
                2222222222222222....224556688899888999999998.699****************998776655 PP

>> PF11928.3  Domain of unknown function (DUF3446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   7.1   1.5e-05     0.068      33      64 ..      12      46 ..       1      61 [. 0.53

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.5e-05
   PF11928.3 33 ppas...sssssssssssassqssslscsvsqsep 64
                 pa+   sssssssssss+ss+s+s s  v  ++p
  MMETSP1325-20131115|4005_1 12 DPATstaSSSSSSSSSSSSSSSSPSFSHGVIGTHP 46
                33441113333333555555555555665655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       666  (0.0487127); expected 273.4 (0.02)
Passed bias filter:                      451  (0.0329871); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.47s 00:00:00.93 Elapsed: 00:00:00.54
# Mc/sec: 891.98
//
Query:       MMETSP1325-20131115|4009_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.33   10.7   3.0        4.3    7.1   0.4    2.1  2  PF06072.6 Alphaherpesvirus tegument protein US9


Domain annotation for each model (and alignments):
>> PF06072.6  Alphaherpesvirus tegument protein US9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.4   0.00032       4.3      39      59 ..      11      30 ..       7      31 .. 0.74
   2 ?    4.6   0.0    0.0019        26      20      39 ..      33      51 ..      29      60 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00032
   PF06072.6 39 vfvvvvlcvlsgllGallarl 59
                ++++ + ++lsg+lG l++rl
  MMETSP1325-20131115|4009_1 11 IVLA-ITASLSGALGNLIIRL 30
                3333.6899********9875 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0019
   PF06072.6 20 rrqhakrrrrRrcllavaiv 39
                rr+ + r+  R c+l v+++
  MMETSP1325-20131115|4009_1 33 RRE-TYRKTTRLCGLLVILA 51
                566.8888999999887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.43s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 316.12
//
Query:       MMETSP1325-20131115|4008_1  [L=498]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-46  156.4   0.0    1.4e-22   79.5   0.0    2.1  2  PF00782.15 Dual specificity phosphatase, catalytic domain
    4.1e-07   29.4   0.0      0.013   14.7   0.0    2.1  2  PF00102.22 Protein-tyrosine phosphatase
      4e-05   23.0   0.0     0.0036   16.6   0.0    2.2  2  PF05706.7  Cyclin-dependent kinase inhibitor 3 (CDKN3)
     0.0033   17.5   0.1          1    9.4   0.0    2.4  2  PF13350.1  Tyrosine phosphatase family
     0.0058   15.4   0.0        1.6    7.4   0.0    2.1  2  PF04179.7  Initiator tRNA phosphoribosyl transferase
     0.0084   16.1   1.6       0.22   11.6   0.2    2.6  2  PF00415.13 Regulator of chromosome condensation (RCC1) repeat
  ------ inclusion threshold ------
       0.12   12.6   0.0        0.5   10.6   0.0    2.0  2  PF00581.15 Rhodanese-like domain


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   1.9e-24   3.7e-21      13     132 ..       2     125 ..       1     126 [. 0.92
   2 !   79.5   0.0   7.3e-26   1.4e-22      12     131 ..     202     322 ..     191     324 .. 0.89

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 1.9e-24
                 HHHH----EEEETTSSSSEE..ECCTT---EEEE--.---STT--CGGGHHHHHHHHHHH.CC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-STTHHHHHHHHH CS
  PF00782.15  13 lleklgitlvinvtkevpkn..nadkkseieylrip.vedetetkiskeleeavefieka.eqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnagflrqLleyer 132
                 +l+ lgi +v+n++ +v ++   +++k +i y +i  ++d + + i + l+ a+efi++a +++g+ vlVHC+aGi+RSa+l+i Yl+ +++ +l   +++  + r++i +n +f+ qL+e+ +
  MMETSP1325-20131115|4008_1   2 MLQRLGIGAVLNCAPSVCADpvAKYNKARILYAEIDaQDDRSFQLIKECLKPASEFISAAhRDRGCGVLVHCMAGINRSAALAIGYLLVRDRPNLFTLFSACVSSRPSILQNPSFQLQLCELAN 125
                 6899**********999887999999**********5555677778888*********9968899*******************************************************9875 PP

  == domain 2    score: 79.5 bits;  conditional E-value: 7.3e-26
                 HHHHH----EEEETTSSSSEEECCTT---EEEE-----STT--CGGGHHHHHHHHHHH....CC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-STTHHHHHHHH CS
  PF00782.15  12 alleklgitlvinvtkevpknnadkkseieylripvedetetkiskeleeavefieka....eqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnagflrqLleye 131
                 +ll  +++ +v+ v   +p  ++  +s  +y ++ + d+ ++ + +++e+a+efi++a    +q+++ vlVHCq G+sRS+++++aYl+++++l+l eA e+v+  r+++ p+  flr L e++
  MMETSP1325-20131115|4008_1 202 ELLRRHNVVAVVCVG-AKP--QFEGESGLRYHHVSISDDGTQSMYPFFEAATEFISEAlgrkTQNQEAVLVHCQGGMSRSPAMAMAYLIRREGLTLAEAAEMVYAARPAVKPRPTFLRDLEELQ 322
                 566677777777666.233..467889999**************************999998999******************************************************99876 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   6.8e-06     0.013     151     223 ..      50     113 ..      38     124 .. 0.70
   2 !   12.6   0.0   2.9e-05     0.056     153     192 ..     247     286 ..     216     322 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 6.8e-06
                 GSHHHHHHHHHHHHHSSTTSS-EEEES------HHHHHHHHHHHHHHHHT--TBEHHHHHHHHHTTSTTSS-S CS
  PF00102.22 151 spkslldlirkvrksktaksgpvvVhCsaGvgRtgtfvaldilleqleaeeekvdvlqivkelRkqRpgmvqs 223
                   k+  ++i ++++++      v+VhC+aG++R+++++   i    +++    ++++ + + + ++Rp++ q+
  MMETSP1325-20131115|4008_1  50 CLKPASEFISAAHRDR---GCGVLVHCMAGINRSAALA---IGYLLVRD--R-PNLFTLFSACVSSRPSILQN 113
                 4555566676666666...899************7654...33333444..3.57777777777788877777 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHHHHHHSSTTSS-EEEES------HHHHHHHHH CS
  PF00102.22 153 kslldlirkvrksktaksgpvvVhCsaGvgRtgtfvaldi 192
                 ++ +++i ++  +kt++++ v+VhC  G++R+ +++++ +
  MMETSP1325-20131115|4008_1 247 EAATEFISEALGRKTQNQEAVLVHCQGGMSRSPAMAMAYL 286
                 4556888888888899****************99877655 PP

>> PF05706.7  Cyclin-dependent kinase inhibitor 3 (CDKN3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.013        26     119     156 ..      50      89 ..      23      94 .. 0.73
   2 !   16.6   0.0   1.8e-06    0.0036      99     155 ..     225     286 ..     215     295 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.013
   PF05706.7 119 cleimeelatclknyr..ktlihcygglgrsclvaaclll 156
                 cl+   e+ ++ +  r    l+hc  g+ rs+ +a   ll
  MMETSP1325-20131115|4008_1  50 CLKPASEFISAAHRDRgcGVLVHCMAGINRSAALAIGYLL 89 
                 555555555555555522469**********998887776 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 1.8e-06
   PF05706.7  99 ygivthhhpiadggtpdiascle.....imeelatclknyrktlihcygglgrsclvaacll 155
                  g+  hh  i+d gt  +   +e     i e l    +n+   l+hc gg+ rs  +a + l
  MMETSP1325-20131115|4008_1 225 SGLRYHHVSISDDGTQSMYPFFEaatefISEALGRKTQNQEAVLVHCQGGMSRSPAMAMAYL 286
                 5778899********88755444222235566888889999*************98887665 PP

>> PF13350.1  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0078        15     115     142 ..      56      84 ..      32      93 .. 0.75
   2 !    9.4   0.0   0.00053         1      97     144 ..     238     284 ..     200     290 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0078
   PF13350.1 115 avlealaeeeg.pvlfHCtaGKDRTGvva 142
                 ++++a  +++g  vl+HC aG  R   +a
  MMETSP1325-20131115|4008_1  56 EFISAAHRDRGcGVLVHCMAGINRSAALA 84 
                 5555555555559********99976655 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00053
   PF13350.1  97 amaelyreiledakkayravlealaeeegpvlfHCtaGKDRTGvvaal 144
                   +++y  + e a++ ++++l    +++++vl+HC+ G  R   +a+ 
  MMETSP1325-20131115|4008_1 238 GTQSMYP-FFEAATEFISEALGRKTQNQEAVLVHCQGGMSRSPAMAMA 284
                 4445554.44555788899999999999**********9998777665 PP

>> PF04179.7  Initiator tRNA phosphoribosyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0008       1.6     320     395 ..       9      85 ..       4      93 .. 0.83
   2 !    5.9   0.0    0.0023       4.4     345     398 ..     231     286 ..     186     316 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0008
   PF04179.7 320 dlviklsekvvss.eteekkkkvlelklesskkgskeLrk.aLpkieefiksklsseknkkilvlcesGkdlsvgvvl 395
                  +v+++ ++v  +  ++ +k+++l  ++ ++   s +L k  L++++efi+++ +  +   +lv+c  G + s+++++
  MMETSP1325-20131115|4008_1   9 GAVLNCAPSVCADpVAKYNKARILYAEIDAQDDRSFQLIKeCLKPASEFISAAHRD-RGCGVLVHCMAGINRSAALAI 85 
                 57999**99999878888899999999*9999999998651688999999888877.8***********888887765 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0023
   PF04179.7 345 klesskkgskeLrkaLpkieefiksklss..eknkkilvlcesGkdlsvgvvlail 398
                 +++ s  g +++   ++ ++efi+++l +  ++++ +lv+c+ G   s ++++a l
  MMETSP1325-20131115|4008_1 231 HVSISDDGTQSMYPFFEAATEFISEALGRktQNQEAVLVHCQGGMSRSPAMAMAYL 286
                 45556778889999999999***9999875566788********988888888766 PP

>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.2   0.00011      0.22       2      19 ..     411     427 ..     410     443 .. 0.89
   2 ?    2.9   0.0     0.061   1.2e+02      32      51 .]     475     494 ..     470     494 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00011
                 TEEEEE---------.-- CS
  PF00415.13   2 GrVysWGrndyGqLGkgg 19 
                 G+++++G+++ G++G +g
  MMETSP1325-20131115|4008_1 411 GELWAFGCGSGGRCG-VG 427
                 99*************.55 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.061
                 GG------EEE-----EEEE CS
  PF00415.13  32 glsgvrvvqvacGgsHtlal 51 
                  l+g+rvv++++  +H +al
  MMETSP1325-20131115|4008_1 475 VLEGKRVVSACASRYHGCAL 494
                 578899***********997 PP

>> PF00581.15  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.8   3.6e+03      61      85 ..      60      84 ..      24      91 .. 0.70
   2 ?   10.6   0.0   0.00025       0.5      36      92 ..     232     288 ..     224     296 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.8
  PF00581.15 61 gkkldkkktvvvycssgnrsggaaa 85
                + + d+   v+v+c  g +++ a a
  MMETSP1325-20131115|4008_1 60 AAHRDRGCGVLVHCMAGINRSAALA 84
                4445666688999976666665555 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00025
  PF00581.15  36 vpldsl.ypkrdlpfkdklaeeleesgkkldkkktvvvycssgnrsggaaalllalil 92 
                 v+ +++ +++ +++f+  ++   e +g+k ++   v+v+c++g++++ a a+ ++li 
  MMETSP1325-20131115|4008_1 232 VSISDDgTQSMYPFFEAATEFISEALGRKTQNQEAVLVHCQGGMSRSPAMAM-AYLIR 288
                 555445667778888888888899999999999999*****99999999988.55544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.79u 0.36s 00:00:01.14 Elapsed: 00:00:00.47
# Mc/sec: 2539.12
//
Query:       MMETSP1325-20131115|4012_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.0   0.0       0.13   11.7   0.0    1.2  1  PF12324.3 Helix-turn-helix domain of alkylmercury lyase


Domain annotation for each model (and alignments):
>> PF12324.3  Helix-turn-helix domain of alkylmercury lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.8e-06      0.13      42      71 ..      22      51 ..      12      52 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.8e-06
                HHH-------HHHHHHHHTT--SS-B---- CS
   PF12324.3 42 eslanatgktveeVkkvLaqapsveydedg 71
                ++l  +t+ +v+eV   L+  +s + dedg
  MMETSP1325-20131115|4012_1 22 QKLQRTTDFSVKEVISLLEHYKSLVQDEDG 51
                678899**********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       498  (0.0364248); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 205.40
//
Query:       MMETSP1325-20131115|4014_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.63
# Mc/sec: 543.94
//
Query:       MMETSP1325-20131115|4010_1  [L=486]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-32  110.6   0.0    9.3e-32  110.0   0.0    1.3  1  PF00069.20 Protein kinase domain
      5e-18   65.0   0.0    3.5e-17   62.2   0.0    1.9  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
       0.37   10.4   0.0       0.37   10.4   0.0    2.3  3  PF04360.7  Serglycin


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.0   0.0     2e-35   9.3e-32     117     259 ..       1     178 [.       1     179 [. 0.92

  Alignments for each domain:
  == domain 1    score: 110.0 bits;  conditional E-value: 2e-35
                 TCEE-S--SGGGEEEETT--EEE------EEE...CEESS-CSS----GGGS-HHHHH........................................TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGG CS
  PF00069.20 117 ngiiHrDLKpeNiLldkkgelkiaDFGlakkl...eksseklttlvgtreYmAPEvll........................................kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpw 259
                 +g+iHrD+K +N+L++ kg++k+aDFG++kk+      se+ +++ gt  YmAPEv++                                        ++ +y++k+D+WslG+++ e++ gk+p+s+         i+k+  ++   + p+s   see +d+++ +l+++pa R+ a e+ +hp+
  MMETSP1325-20131115|4010_1   1 MGVIHRDIKASNVLIN-KGQVKLADFGCSKKVyfnGDASENQHSMIGTTIYMAPEVMKsdgggdhaadsstgshsgadrqgaddrqllpgetgeagteSSAGYGRKADIWSLGIMILEMAHGKPPYSNP-----GVAIYKVCMTDELPPFPDS--LSEEGRDFVTLCLNRNPALRPDASELRRHPF 178
                 58**************.***************998888999*********************************************************9****************************99.....4555555555555555544..349**************************98 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2   0.0   7.6e-21   3.5e-17     124     257 ..       3     175 ..       1     176 [. 0.92

  Alignments for each domain:
  == domain 1    score: 62.2 bits;  conditional E-value: 7.6e-21
                 EEEST-SGGGEEEETTTEEEE-----CEESTTTSCE.EESTT-EECGGGS-HHHHHHSE.........................................EEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12 124 lvHrdLaarNvLleeekvvkisDfGLardiekddyy.kkkeeaklpvkWmapEslkekk.........................................ftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeRptfkelve 257
                 ++Hrd+ a NvL++ + +vk++DfG +++++ + +  +++++      +mapE++k+                                           +  k+D+Ws G+++ E++  g+ py++     +++ + +++  + p++ +ee  ++++ C++++p+ Rp+ +el++
  MMETSP1325-20131115|4010_1   3 VIHRDIKASNVLIN-KGQVKLADFGCSKKVYFNGDAsENQHSMIGTTIYMAPEVMKSDGggdhaadsstgshsgadrqgaddrqllpgetgeagtessagYGRKADIWSLGIMILEMAH-GKPPYSN-PGVAIYKVCMTDELPPFPDSLSEEGRDFVTLCLNRNPALRPDASELRR 175
                 8*************.899************655554277777789999********9999*********************************************************98.9999977.567789999*********************************999875 PP

>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.5   1.6         3   1.4e+04      99     107 ..      67      75 ..      58      78 .. 0.50
   2 ?   10.4   0.0   8.1e-05      0.37      92     125 ..     226     259 ..     136     268 .. 0.72
   3 ?   -8.2   4.3         3   1.4e+04      93     103 ..     347     357 ..     312     366 .. 0.64

  Alignments for each domain:
  == domain 1    score: -6.5 bits;  conditional E-value: 3
   PF04360.7  99 GsGsGsgsG 107
                  s +Gs sG
  MMETSP1325-20131115|4010_1  67 DSSTGSHSG 75 
                 333444444 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 8.1e-05
   PF04360.7  92 sgsgsgsGsGsGsgsGsGflaeleqeyqpvdend 125
                  g+ +g+G G+G+g+G+G  a+++ +    + ++
  MMETSP1325-20131115|4010_1 226 RGARAGAGMGAGAGAGAGAQADVDSDEEKFERSN 259
                 688899999*************999988777666 PP

  == domain 3    score: -8.2 bits;  conditional E-value: 3
   PF04360.7  93 gsgsgsGsGsG 103
                  sgs s s s 
  MMETSP1325-20131115|4010_1 347 TSGSLSHSHSL 357
                 23333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.40s 00:00:01.20 Elapsed: 00:00:00.84
# Mc/sec: 1386.46
//
Query:       MMETSP1325-20131115|4015_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-09   35.1   0.3    5.1e-05   23.2   0.1    2.6  3  PF13857.1  Ankyrin repeats (many copies)
    6.3e-06   26.4   0.1    8.2e-06   26.0   0.0    1.4  1  PF13637.1  Ankyrin repeats (many copies)
    8.3e-06   25.9   0.1    1.1e-05   25.5   0.0    1.4  1  PF12796.2  Ankyrin repeats (3 copies)
    8.9e-06   25.1   0.4      0.017   14.8   0.1    2.3  2  PF00023.25 Ankyrin repeat
    0.00094   19.0   0.2       0.45   10.8   0.1    2.3  2  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.22   5.9e+02      12      23 ..       2      13 ..       1      16 [. 0.80
   2 !   15.3   0.0   5.6e-06     0.015      27      53 ..      21      48 ..      18      48 .. 0.93
   3 !   23.2   0.1   1.9e-08   5.1e-05       1      39 [.      29      67 ..      29      69 .] 0.90

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.22
   PF13857.1 12 tdeggntpLhlA 23
                +de+g+ pL +A
  MMETSP1325-20131115|4015_1  2 QDEHGYAPLVNA 13
                688999999888 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 5.6e-06
   PF13857.1 27 galevvrlLl.apgadlnlrdsdgltal 53
                 a+++v+lLl +p+ ++ +rd++g t+l
  MMETSP1325-20131115|4015_1 21 VAPDMVKLLLsKPNINIQIRDKEGYTCL 48
                589*********************9986 PP

  == domain 3    score: 23.2 bits;  conditional E-value: 1.9e-08
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapg 39
                Ll++ ++++  +d++g+t Lh+A+  ga   +r L+a+g
  MMETSP1325-20131115|4015_1 29 LLSKPNINIQIRDKEGYTCLHWACAVGAMGSARALHAAG 67
                6777799****************************9665 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0     3e-09   8.2e-06      14      50 ..      23      60 ..       6      66 .. 0.73

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 3e-09
   PF13637.1 14 lelvklLlekgidinrt..desGntaLhiAalrgnieil 50
                 ++vklLl+ +++in +  d++G t+Lh A+  g +  +
  MMETSP1325-20131115|4015_1 23 PDMVKLLLS-KPNINIQirDKEGYTCLHWACAVGAMGSA 60
                689*****5.566666666************65544444 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   4.1e-09   1.1e-05      40      83 ..      24      68 ..       1      69 [] 0.83

  Alignments for each domain:
  == domain 1    score: 25.5 bits;  conditional E-value: 4.1e-09
   PF12796.2 40 eivklLleaga.dvnakdkegntpLhlAvrnghlelvklLlekga 83
                ++vklLl++ + +++ +dkeg+t+Lh+A+  g    ++ L  +g+
  MMETSP1325-20131115|4015_1 24 DMVKLLLSKPNiNIQIRDKEGYTCLHWACAVGAMGSARALHAAGI 68
                89******8544677777**************9999999988876 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0   0.00046       1.3      14      31 ..      22      38 ..       5      42 .. 0.71
   2 !   14.8   0.1   6.1e-06     0.017       2      25 ..      44      67 ..      43      69 .] 0.83

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00046
                HHHHHHHHHHTTSSTTHB CS
  PF00023.25 14 nlevvklLlsqGAdlnaq 31
                 +++vklLls   ++n+q
  MMETSP1325-20131115|4015_1 22 APDMVKLLLS-KPNINIQ 38
                689*******.7777766 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 6.1e-06
                SCBHHHHHHHTTHHHHHHHHHHTT CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqG 25
                G+T+LH+A+  g +  ++ L  +G
  MMETSP1325-20131115|4015_1 44 GYTCLHWACAVGAMGSARALHAAG 67
                9*********99888888776665 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0034       9.2      15      29 ..      23      36 ..       6      39 .. 0.85
   2 !   10.8   0.1   0.00016      0.45       2      16 ..      44      58 ..      43      68 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0034
   PF13606.1 15 ielveaLlengadin 29
                +++v++Ll++ ++in
  MMETSP1325-20131115|4015_1 23 PDMVKLLLSK-PNIN 36
                79*******9.4555 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00016
   PF13606.1  2 GnTpLhlAasngrie 16
                G+T+Lh+A+  g + 
  MMETSP1325-20131115|4015_1 44 GYTCLHWACAVGAMG 58
                9********977654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 311.98
//
Query:       MMETSP1325-20131115|4016_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-20   70.6   0.0    7.7e-20   70.4   0.0    1.1  1  PF00085.15 Thioredoxin
    3.6e-05   23.7   0.0      5e-05   23.2   0.0    1.3  1  PF13905.1  Thioredoxin-like
     0.0019   18.2   0.1     0.0071   16.4   0.1    1.8  1  PF13098.1  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.014   14.8   0.0      0.018   14.4   0.0    1.2  1  PF08534.5  Redoxin


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   0.0   2.2e-23   7.7e-20      19      97 ..       9      86 ..       2      95 .. 0.89

  Alignments for each domain:
  == domain 1    score: 70.4 bits;  conditional E-value: 2.2e-23
                SCEEEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETT.TTHHHHHHTT--SSSEEEEESSSSEEEEE---.-HHHH CS
  PF00085.15 19 klvlvefyApwCGhCkalaPeyeklaeelkekvvlakvdvd.enkdlaseygvegiPtlklfkngkkveevegarekekl 97
                +lv+ +f+A+wCG+Ck++ P +e+la ++  +vv++k+  d + ++++se g+ ++Pt+ ++ +g+++ ev+ga ++ ++
  MMETSP1325-20131115|4016_1  9 QLVVADFWASWCGPCKMFGPFFEQLAGKHP-DVVFIKIQQDgAGAEVCSEQGIGAFPTIRFYIAGEQKGEVKGA-DAGRV 86
                789***************************.**********6669****************************9.55444 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.5e-08     5e-05       2      47 ..       9      48 ..       8      71 .. 0.83

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 1.5e-08
   PF13905.1  2 kivllyfaaswcppckaftpelkelyeklkaskdkveivyVsldrd 47
                ++v+ +f+aswc+pck f p  ++l  k+     +  +v++++ +d
  MMETSP1325-20131115|4016_1  9 QLVVADFWASWCGPCKMFGPFFEQLAGKHP----D--VVFIKIQQD 48
                78999************************8....4..555544444 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   2.1e-06    0.0071       5      77 ..       8      57 ..       4      83 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 2.1e-06
   PF13098.1  5 gkrvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrk 77
                g+ v+++f++ +C+ Ck + +  ++         ++  v++++i+++  + ++v++                +
  MMETSP1325-20131115|4016_1  8 GQLVVADFWASWCGPCKMFGPFFEQ------LAGKHPDVVFIKIQQDG-AGAEVCS----------------E 57
                789**************99988874......33456777777777443.2333444................3 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   5.3e-06     0.018      31      83 ..      11      62 ..       5      82 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5.3e-06
                EEEE---------IIIIIHHHHTHHHH.HH----EEEEE-SS-HHHHHHHHH....T CS
   PF08534.5 31 vvlvfvpgafcptCsaehpyleklaklakekgvdvvavvaqndafvkeawak....e 83
                vv  f+++ +c++C+   p++e+l    + k  dvv++ +q+d    e++++     
  MMETSP1325-20131115|4016_1 11 VVADFWAS-WCGPCKMFGPFFEQL----AGKHPDVVFIKIQQDGAGAEVCSEqgigA 62
                6778****.*******999*9999....44456788999999999888888855554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 632.23
//
Query:       MMETSP1325-20131115|4007_1  [L=1068]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-30  104.6   0.1    4.5e-30  104.1   0.0    1.3  1  PF00650.15 CRAL/TRIO domain
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.26   11.4   0.0    1.5  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   0.0   6.7e-34   4.5e-30       3     159 .]     834    1004 ..     832    1004 .. 0.89

  Alignments for each domain:
  == domain 1    score: 104.1 bits;  conditional E-value: 6.7e-34
  PF00650.15    3 ileggkvgihgrDkngrpvlylrlgrfdpk.......klseeelvrllllvlerllkllee........dgqiegvtvviDmkglslskmlwkpisllkkilkilqdnyPerlkkilivnaPklfkvafklvkpfldektreKikfvspsntpatlekyidpeqlpkelGGt 159 
                  i+e++  +i+grDk+g+p+++ ++++ + +        ++ +++v ++++++e + + l +        + +++ +  ++Dm+g+++++   +++ +++  l  l+++yPer+ k +++n+P++f++++klv p+ld+++reK+++++ ++ +a l++ +d++qlp+ +GGt
  MMETSP1325-20131115|4007_1  834 IKEEYSHFITGRDKMGHPIYVDVIKSPNVQfrqlkrrGVTVDDVVDHMIFLNEWMWRRLLDdydevgstPRKEAYLLKIVDMQGIGMADTWGDTYLYFQ-KLSALNKHYPERMFKTFVINVPSSFSFVWKLVAPMLDPNVREKVSIYKANEFQAPLLELVDADQLPERYGGT 1004
                  6788999******************99999997777766666***********99985555567788888899*************9977655566665.5669*******************************************************************7 PP

>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.7e-05      0.26      15     102 ..     236     331 ..     219     333 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.7e-05
                 SCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTS..S.....C....TTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24  15 ktwkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkf..a.....l....qkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                  + k++++vL +  L +f++ +       + + + ++++v++a+      a     +    +  ++  f+++  + +  +++aes+ e+ rWv+a+ ++
  MMETSP1325-20131115|4007_1 236 GKEKQVFVVLSHLALNIFDPCE---PRGGRSTSQATSASVEDAPMAGRliAsltmaEiitvETLNQTQFRVQDAECRDSIFEAESAAECDRWVRAIASA 331
                 5667888888888888888876...44444444444445555555433441333331332344555667777777799******************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1068 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       547  (0.0400088); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.51u 0.38s 00:00:01.89 Elapsed: 00:00:00.78
# Mc/sec: 3281.17
//
Query:       MMETSP1325-20131115|4017_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.14   11.9   0.0    1.1  1  PF10512.4 Cell division cycle-associated protein 8


Domain annotation for each model (and alignments):
>> PF10512.4  Cell division cycle-associated protein 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     1e-05      0.14      29      76 ..      25      77 ..       6      84 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1e-05
                X.....XXXXXXXX.XXXXXXXX--------------.----S-EE-------- CS
   PF10512.4 29 P.....rvdprtpk.tallRsarlgekvysisnGsplvagvkeanvniPienGr 76
                P     r++ +++      R++ ++ +v + +nG p  ++ +   + +P ++Gr
  MMETSP1325-20131115|4017_1 25 PpgvaaRMQCQAAIaSVTARYPDASKVVVTHYNGGPC-EDEAIQKIVVPGGGGR 77
                2344445555544304467******************.7777999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|4018_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        99  (0.00724108); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.53
# Mc/sec: 158.25
//
Query:       MMETSP1325-20131115|4019_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.28s 00:00:00.62 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|4020_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-14   53.2   1.1      3e-14   52.6   0.8    1.3  1  PF14008.1  Iron/zinc purple acid phosphatase-like protein C
  ------ inclusion threshold ------
      0.052   12.8   0.1        0.1   11.9   0.0    1.5  2  PF00149.23 Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> PF14008.1  Iron/zinc purple acid phosphatase-like protein C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.8   4.4e-18     3e-14       1      62 []      58     123 ..      58     123 .. 0.88

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 4.4e-18
                 TS-EEEE-------..---B-SS-..-TTEEEEE.-------EEE-SSSEEEEEEE-ST----CEEE CS
   PF14008.1   1 kApvhIvvGaAGnk..ldkfsepq..pewsafre.sdyGysrltvvNrthLhwefvrsddgqvlDsf 62 
                 +Apvh+v+Ga+G++  +d+++++    +w + ++ +++Gy++l vv++t L+w+++ +++  v+D+f
  MMETSP1325-20131115|4020_1  58 RAPVHVVTGAGGCDegHDDYDSKAvaTSWHVMHNtANWGYGML-VVDETSLSWTQYDAKTDDVIDTF 123
                 69***********85678877764459***985537*******.*********************98 PP

>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.5e-05       0.1     179     201 .]      16      38 ..       6      38 .. 0.87
   2 ?   -2.2   0.0      0.31   2.1e+03     117     127 ..      89      99 ..      54     123 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHTTSSEEEE-SSSSE CS
  PF00149.23 179 dalekllekygvdlvlrGHeHvp 201
                  a e++l+ ++vd+++ GH H +
  MMETSP1325-20131115|4020_1  16 AAIEDILYAHKVDVYFAGHKHAY 38 
                 6889*****************86 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.31
                 EEEEEETTSHC CS
  PF00149.23 117 elgglsglypl 127
                  +++ ++ y+ 
  MMETSP1325-20131115|4020_1  89 MHNTANWGYGM 99 
                 33333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 533.93
//
Query:       MMETSP1325-20131115|4021_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-07   31.5   1.3    1.1e-07   31.5   0.9    1.0  1  PF03151.11 Triose-phosphate Transporter family


Domain annotation for each model (and alignments):
>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.9   7.8e-12   1.1e-07      66     122 ..      16      71 ..       1      72 [] 0.80

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 7.8e-12
  PF03151.11  66 sssiksldlssivryvlllllngvlafllnisaflllervSsltlsvagivkrvlvi 122
                 ++ ++ +++s  ++  +lll+ng++++++ +++ l+l+rv ++t+sv++ + r+++ 
  MMETSP1325-20131115|4021_1  16 VDLSAGVSTS-PNFSPALLLINGLTFWAYLQLSWLVLSRVATVTHSVCNSLRRPVMC 71 
                 3334444555.8899***************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|4023_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   14.5   0.7      0.028   14.0   0.5    1.3  1  PF07332.6 Protein of unknown function (DUF1469)
        8.6    5.9   7.4        9.1    5.9   2.4    2.4  2  PF06422.7 CDR ABC transporter


Domain annotation for each model (and alignments):
>> PF07332.6  Protein of unknown function (DUF1469)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.5   4.1e-06     0.028      48     102 ..      25      75 ..      14      88 .. 0.65

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 4.1e-06
   PF07332.6  48 alvallvllaalvaaLaealvlpawlAalivavvllllAgilalvgkrrlkaksl 102
                 + + + +++   +++L+ ++  ++ +++ iv   ++l+A++++++g+rr+  ++ 
  MMETSP1325-20131115|4023_1  25 G-FCANFFSWIWIMLLQYQT--WEHVGIAIVCSTIFLVAAAIVIRGVRRIF-SRF 75 
                 2.223333333344443333..34599*********************986.455 PP

>> PF06422.7  CDR ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   2.4    0.0013       9.1      44      81 ..      11      50 ..       6      55 .. 0.78
   2 ?    4.5   0.3    0.0036        25      47      79 ..      42      74 ..      39      98 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0013
   PF06422.7 44 ekshkwrnfgil.iafli.fflivylilteliksakskge 81
                e++h+wr f i  ++f + ff  + ++l+++ +++  +  
  MMETSP1325-20131115|4023_1 11 ERDHIWRVFAIGsMGFCAnFFSWIWIMLLQYQTWEHVGIA 50
                579********64899873666788899999999876655 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0036
   PF06422.7 47 hkwrnfgiliaflifflivylilteliksaksk 79
                ++w  +gi i    +fl++ +i++  ++   s+
  MMETSP1325-20131115|4023_1 42 QTWEHVGIAIVCSTIFLVAAAIVIRGVRRIFSR 74
                6899******99999999999988766655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       746  (0.0545641); expected 273.4 (0.02)
Passed bias filter:                      481  (0.0351814); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 535.66
//
Query:       MMETSP1325-20131115|4024_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|4025_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 770.59
//
Query:       MMETSP1325-20131115|4026_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        7.7    4.4  18.2        9.3    4.2  12.6    1.1  1  PF09770.4 Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2  12.6   0.00068       9.3     183     297 ..      91     158 ..       3     180 .. 0.35

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.00068
   PF09770.4 183 pqqspprqaalpqqakpelpsqypqppqqlqqevqqqlqqapsqapaqaplpaqlpqqlqnlq.qqqlpqlsqqmppqpvqppqqqqqqvlklpqaqppplq.qlsaspqlaqqqla 297
                 +q                                                 + q+ qq+q+lq q +lp+++qq+ p+  +++qq++qq++++pq+  +    q+ +++++ +++++
  MMETSP1325-20131115|4026_1  91 QQ-------------------------------------------------RGQQRQQQQQLQiQLALPHQQQQALPSVLKKQQQHEQQQTFVPQRESTGYCdQQLPHQENSRGASP 158
                 11.................................................111112222222111222222222222222222222222222222222222122222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       873  (0.0638531); expected 273.4 (0.02)
Passed bias filter:                      466  (0.0340843); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1104.20
//
Query:       MMETSP1325-20131115|4027_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-18   66.6   0.0    1.6e-18   66.4   0.0    1.1  1  PF00348.12 Polyprenyl synthetase


Domain annotation for each model (and alignments):
>> PF00348.12  Polyprenyl synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.4   0.0   1.2e-22   1.6e-18     147     249 ..       2     106 ..       1     120 [. 0.90

  Alignments for each domain:
  == domain 1    score: 66.4 bits;  conditional E-value: 1.2e-22
                 HHHCHHHHHHHHCC----..-CCHHHHHHHHHH---HHHHHHHHHHH---TTT----.--TTTTT---HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHHHH CS
  PF00348.12 147 aaLfeasvqlaaivagad..eeeekelkdfglelGlaFQivDDilDltadeeelgKpvgsDlqegkltlpvllalekaseeqrkllkeasekklseaaakkvaet 249
                 a+L++ +++  ai++g+   +e + ++++fg++lGla+Qi+DDilD+t+++e lgKp+ +D++ g  t+pvl+a + ++e    +++  +ek ++e a + v et
  MMETSP1325-20131115|4027_1   2 ASLICDACKSCAILGGHGinSEITLAAEKFGYHLGLAYQIIDDILDFTGTSEVLGKPAMADVSLGLATAPVLYAAQDSRELRPVIKRRFKEKGDAELAYNLVMET 106
                 788999999999999887658889999***************************************************************999998887766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 695.87
//
Query:       MMETSP1325-20131115|4029_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.62
# Mc/sec: 711.18
//
Query:       MMETSP1325-20131115|4028_1  [L=388]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.39s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 1823.11
//
Query:       MMETSP1325-20131115|4032_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|4034_1  [L=287]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   14.6   0.0       0.15   12.1   0.0    2.1  2  PF06985.6  Heterokaryon incompatibility protein (HET)
       0.12   11.6   0.0       0.19   10.9   0.0    1.3  1  PF01077.17 Nitrite and sulphite reductase 4Fe-4S domain


Domain annotation for each model (and alignments):
>> PF06985.6  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.1e-05      0.15      40      59 ..      23      42 ..       5      53 .. 0.72
   2 ?   -0.5   0.0      0.16   1.1e+03      97     131 ..     148     183 ..     100     192 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.1e-05
   PF06985.6 40 dgerylWiDaiCInqdddae 59
                    ++W D++CI+q++ ++
  MMETSP1325-20131115|4034_1 23 GRFPTFWLDKVCIDQENIKD 42
                55688***********8775 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.16
   PF06985.6  97 alkkeslee.eesekedkterksealeellespwft 131
                 +  ++ ++   + +++++t ++ ++ +++l+s+w  
  MMETSP1325-20131115|4034_1 148 ESIRDVAKIyANRKSKRTTGKAGSTDRSILSSTWVL 183
                 222222222111111123334444555566666654 PP

>> PF01077.17  Nitrite and sulphite reductase 4Fe-4S domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   2.8e-05      0.19     105     152 ..     106     153 ..      85     158 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 2.8e-05
                 ----HHHHHHHHHHHHHH..HCSGCC-SHHHHHHH---HHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01077.17 105 vpeedvievveaivevyrgdrknrkkeRlkylierlGlekfrekveee 152
                 +  edv+++++    +++   + ++ +Rl+ +i+ +G++kf e +++ 
  MMETSP1325-20131115|4034_1 106 TSVEDVVKILRDFDVTQARCYNPNEESRLMTVIQAVGVDKFNESIRDV 153
                 445567777777777887667777788***************998655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1228.13
//
Query:       MMETSP1325-20131115|4035_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-09   36.9   0.8    2.3e-09   36.9   0.6    1.5  2  PF14312.1 FG-GAP repeat


Domain annotation for each model (and alignments):
>> PF14312.1  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.6   1.7e-13   2.3e-09      14      47 ..       4      39 ..       2      41 .. 0.92
   2 ?   -2.8   0.0      0.45   6.1e+03      19      29 ..      62      72 ..      60      73 .. 0.69

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 1.7e-13
   PF14312.1 14 agDyFGssVaisgdtavVGAygddd..ngtnsGsaY 47
                ++D FG +Vai+gd avVGAy+ d    gtn+Gs+ 
  MMETSP1325-20131115|4035_1  4 KQDLFGAAVAINGDLAVVGAYNRDTyvSGTNAGSVL 39
                68*************************999****96 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.45
   PF14312.1 19 GssVaisgdta 29
                G  Va + dta
  MMETSP1325-20131115|4035_1 62 GVYVAFERDTA 72
                55577777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.64
# Mc/sec: 340.73
//
Query:       MMETSP1325-20131115|4038_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 566.83
//
Query:       MMETSP1325-20131115|4033_1  [L=1067]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   9.2e-156  519.6   0.1   9.2e-156  519.6   0.1    1.9  2  PF00063.16 Myosin head (motor domain)


Domain annotation for each model (and alignments):
>> PF00063.16  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  519.6   0.1  6.8e-160  9.2e-156      94     688 ..       2     580 ..       1     581 [. 0.93
   2 ?   -4.6   0.5      0.27   3.6e+03     530     583 ..     870     923 ..     857     927 .. 0.62

  Alignments for each domain:
  == domain 1    score: 519.6 bits;  conditional E-value: 6.8e-160
                 -----HHHHHHHHHHHHHHS-SSTT....-TTHHHHHHHHHHHHHHH---BEESSETTB-----EEEEEEBTTTBB---EEE--S--GGGGT---TT--SBHHHHHHHTTTTHHHHHHTT--.-CCGSCCCHT----SBTTB-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH-----EEEECTTCCCEESTHHH..HHHHHHHHTS-HHHHHHHHHSEEEEE.SSEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SS.--SEEE-EEE-------SSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGCCS--.SCCHHHHHHHHSS----HHHHHHHHTSTTS..-HHHHHHHHHHHHTTTST.........TEE-TTTS.....TTT-SSEEEEEESSCEEEEE-TTHHHHHH--S-HHHHHHHHT-SSHHHHHHCHSHCH...................CSTTBTCHHC-CHHHHHHHHHHHHHHHHCTSEEEEEEEE-S-TT--TT---HHHHHHHHHH---HHHHHHHH----EEEEHHHHHHHHGGGSCTCS.CSTT--SSHHHHHHHHHHHT....T--GGGEEB---EEEE CS
  PF00063.16  94 SgagkTeatkkliqylasvssstek...aeeeeleskilqanpileafgnaktlrnnnssrfGkfleiqfdasgsivGakietylLeksRvvsqekgeRnFhiFYqLlagasaeekeelkLk.daksYaylsqsgqlkvdgidDaeefketrkalkilglkeeeqreifkvlAaiLhlGnikfkedqkeeqavvedkee..lekiaellgvdveelekallkrrikt.grevvtkalnkeqaedardaLakaiYsrLfdwivekiNealsakedkaaaviGvlDiaGFeifeknsfeqlciNyanEkLqqffnehifkleqeeyeregieweeidygldnqavidLiekkpaGilsllDeecrlpka..tdesflekllktfeskhl.........kfskkrls.....karaessftvkHyAgeVeYsaegflekNkdplsedlvellkssssslvaelfkeeelaedfeeeeaaaesaklgsakgksgkkkkfetvgsqfkeslgelmktLrstnphfvrCikPneekkakkfdsklvleqlkclGvlegirirraGfpsriafdefaerykllaekelvklselvgdekkacekilkel....eldkeeyrvGktkvFf 688
                 SgagkTe tk+++qyl ++s++ e    a+  ++ +ki+++np++eafgnaktlrnnnssrfGkf+ ++++++ +i+G++i++ lLeksRvv++++geRn+hiFYq+ +   a++ + +k++ d+++ +y++qsg+++v  +dDaee++ t +++k+++++++e++++++v+Aai+++Gn++f +++    a+++ +++  l ++++llgv v+ +++all+r+ +  g e+vt++ ++ ++ + rda++k iYs+Lfdwiv +iN++l+ +  ++ ++iG+lDi+GFe ++ n+feql iN++nE Lq++fn+ ifk+e eey re+iew+++ +  dn+++i L+++kp G+l+ lD ec++  a  + +++++k +k++ ++ +                      +++++++f ++HyAg + Y++++f++kN+d+l+  + ++l +s+ +l+++l++  e                       + +  ++ tvg +f  +l++l+k+Lr ++  fvrCik n+++++  +d+  vl ql c+Gv++ + +rraGfpsr+++ +f++ +++ +++ +        d+++ c k+l++      ++++ yr+G+tk+F+
  MMETSP1325-20131115|4033_1   2   580
                 9*******************9988788888899*************************************************************************965...55677888888999**********************************************************999...56666666556**********************9965279**********************************************************************************************************.8*************************9887557789*********.66664665444332......134455789999************************************************54.......................56666779************************************************************************************84......589**********99999899************7 PP

  == domain 2    score: -4.6 bits;  conditional E-value: 0.27
                 HCHSHCH...................CSTTBTCHHC-CHHHHHHHHHHHHHHHH CS
  PF00063.16 530 lfkeeelaedfeeeeaaaesaklgsakgksgkkkkfetvgsqfkeslgelmktL 583
                 +++ +++ ++++ e ++a+ +++ ++ +k+ +    e++  q  e+l+e  k+L
  MMETSP1325-20131115|4033_1 870 IYNAQKMLQSMDAEAFKASVKAATQSVEKAMQVAAHESARVQAIEQLDEAEKVL 923
                 444555555666666666666666666666666666777777777777766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1067 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1076  (0.078701); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.61u 0.41s 00:00:02.02 Elapsed: 00:00:00.97
# Mc/sec: 2635.99
//
Query:       MMETSP1325-20131115|4039_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.62
# Mc/sec: 1093.82
//
Query:       MMETSP1325-20131115|4037_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-18   63.6   0.1    1.2e-17   63.2   0.1    1.2  1  PF02823.11 ATP synthase, Delta/Epsilon chain, beta-sandwich domain


Domain annotation for each model (and alignments):
>> PF02823.11  ATP synthase, Delta/Epsilon chain, beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.2   0.1   9.1e-22   1.2e-17       1      74 [.      29     104 ..      29     111 .. 0.91

  Alignments for each domain:
  == domain 1    score: 63.2 bits;  conditional E-value: 9.1e-22
                 -EEEEB-SS-B-----.-S---B------B--------------SS---B-.--.---B--B-----EEE-SSEEE CS
  PF02823.11   1 lkleivtpervvfsge.veevvapgeeGefgilpgHaplitaLkpgvlrikted.geeesiavsgGflevqdnkvt 74 
                 ++l++  p+  ++ ++ v++v++pg+eG  g+ +gH+p++++Lkpgv++i +e+ ge e+++vsgGf+  +d++vt
  MMETSP1325-20131115|4037_1  29 MSLNFSLPHMNIYADKtVDRVIIPGAEGVYGVTAGHTPIVSQLKPGVVEIVHEAsGEPEKYFVSGGFALTHDTSVT 104
                 67888899999999999**********************************9664788*************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 714.55
//
Query:       MMETSP1325-20131115|4040_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0044   16.3   0.0     0.0048   16.2   0.0    1.1  1  PF07883.6 Cupin domain
  ------ inclusion threshold ------
      0.021   14.1   0.0      0.022   14.0   0.0    1.1  1  PF05899.7 Protein of unknown function (DUF861)
      0.024   14.5   0.0      0.027   14.3   0.0    1.1  1  PF11699.3 Mif2/CENP-C like
      0.072   12.5   0.0       0.08   12.3   0.0    1.1  1  PF06249.7 Ethanolamine utilisation protein EutQ


Domain annotation for each model (and alignments):
>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.4e-06    0.0048      18      62 ..      13      56 ..       3      61 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.4e-06
                T-EEEEEEEE--EEEEE-TE.EEEE-TT-EEEE-TT-EBEEB--SS CS
   PF07883.6 18 gedeffyVleGegeltvdge.eveleaGdsvyfpagtpHrfrNtgd 62
                g +e+  V+ G + l v g+ ++  ++G ++ +p+   H+++N+++
  MMETSP1325-20131115|4040_1 13 GRQETMLVVAGSVDLSVHGKkVFSAKPGTLISVPR--LHKIVNPTT 56
                5569************7766599***********9..899988775 PP

>> PF05899.7  Protein of unknown function (DUF861)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   6.4e-06     0.022      22      58 ..      11      47 ..       3      58 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 6.4e-06
                E-SSEEEEEEEE-EEEEEE----EEEE-TT-EEEE-- CS
   PF05899.7 22 eyeedEtcyileGevtvtpeggetvelgaGDlvvfpk 58
                + +++Et+ ++ G+v++ + g + +  ++G+l+ +p 
  MMETSP1325-20131115|4040_1 11 DDGRQETMLVVAGSVDLSVHGKKVFSAKPGTLISVPR 47
                5678***************88888*******998885 PP

>> PF11699.3  Mif2/CENP-C like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     8e-06     0.027      23      67 ..       6      49 ..       3      57 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 8e-06
                --EEEEE--SEEEEEEEEE--EEEEETTEE.EEE----EEEE-TT- CS
   PF11699.3 23 aeKkpknskkatlvFfVikGrvevtvnets.FvigkgsvfqvPrgn 67
                a K   + +++t+   V++G v  +v+ ++ F++ +g    vPr  
  MMETSP1325-20131115|4040_1  6 ANKGVDDGRQETM--LVVAGSVDLSVHGKKvFSAKPGTLISVPRLH 49
                5666666666666..69*********9765499999*******975 PP

>> PF06249.7  Ethanolamine utilisation protein EutQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.3e-05      0.08      97     136 ..      16      56 ..      13      61 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.3e-05
   PF06249.7  97 eidyvieGrldvlidGrkv.vaeaGdviliPkgskiefsvt 136
                 e  +v+ G +d+ + G+kv +a++G +i +P+  ki   +t
  MMETSP1325-20131115|4040_1  16 ETMLVVAGSVDLSVHGKKVfSAKPGTLISVPRLHKIVNPTT 56 
                 566899***********98579**********999976555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|4043_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 396.49
//
Query:       MMETSP1325-20131115|4041_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-16   59.8   0.0      3e-16   58.8   0.0    1.5  1  PF09409.5 PUB domain
  ------ inclusion threshold ------
       0.11   12.2   6.8       0.18   11.5   4.7    1.3  1  PF03153.8 Transcription factor IIA, alpha/beta subunit
        3.5    7.8  20.1         21    5.3  13.9    2.3  1  PF13658.1 Ubiquitin C-terminal hydrolase 37 receptor binding site


Domain annotation for each model (and alignments):
>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   6.6e-20     3e-16       5      67 ..      56     117 ..      52     137 .. 0.84

  Alignments for each domain:
  == domain 1    score: 58.8 bits;  conditional E-value: 6.6e-20
   PF09409.5   5 efkkaleiLlkllkNIlknPneekyRrirlsNktfkekilsvegavelLellGFkeeeeeefl 67 
                 + k  le+L k+++NI knPneekyR+i+ sN tf +ki  + g++e+  +lGFk + e   +
  MMETSP1325-20131115|4041_1  56 TAKVGLETLVKIVDNIAKNPNEEKYRKIKQSNATFNRKIGGLTGGRECILALGFKDDGE-GSW 117
                 567789*************************************************9955.333 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   4.7     4e-05      0.18      84     188 ..     148     266 ..     107     276 .. 0.46

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 4e-05
                 XXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXX...........XXXXXXXXXXXXXX CS
   PF03153.8  84 tpsssssaassaaaslpag......vpaestiktepgqllkvevpvmvtqnsanse.lqqpaqqraaqqlqqslgapassqas.slqqqpaplks.......neesqeqqqpgkeiqqqq 188
                 +p+  ++ a+++++++pag      ++ +   + + g      +p+ v q+++n+   qq  q+  +qq+ qs  +++++ ++  +qq+ +  ++          +q+ ++p+ + q qq
  MMETSP1325-20131115|4041_1 148 APTPAPTPAPTPTPAAPAGgfgaggMGMGGMGMGAGGM-GAGGMPPAVAQMMSNPAvMQQMMQNPMVQQMMQSNPQMSAMMNNpMVQQMLNDPQAmaammqnPMVQQMMNDPQAMAQAQQ 266
                 34444455555555555555555444444444444444.444445555555555555555555555555555555555555553222221111111112111111222222222222222 PP

>> PF13658.1  Ubiquitin C-terminal hydrolase 37 receptor binding site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  13.9    0.0047        21       6      71 ..     197     272 ..     190     281 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0047
   PF13658.1   6 vLs.pealepllesadevqerLlsfLPeedl..........erapealrevlrsPqFkqalasltqalrdgglps.il 71 
                 ++s p +++++++++  +++++++  P+              + p+a+  ++++P+++q ++  + + + ++++  ++
  MMETSP1325-20131115|4041_1 197 MMSnPAVMQQMMQNP--MVQQMMQSNPQMSAmmnnpmvqqmLNDPQAMAAMMQNPMVQQMMNDPQAMAQAQQMMGqMM 272
                 444377777788887..6799999999997798888888777788889999999999999999998888777665255 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1013  (0.074093); expected 273.4 (0.02)
Passed bias filter:                      437  (0.0319631); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.41s 00:00:01.14 Elapsed: 00:00:00.56
# Mc/sec: 1189.77
//
Query:       MMETSP1325-20131115|4042_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-07   28.7   0.1    4.7e-05   22.2   0.0    2.3  2  PF00036.27 EF hand
    2.2e-06   27.6   0.0      6e-06   26.1   0.0    1.7  1  PF13499.1  EF-hand domain pair
    5.4e-05   22.6   0.1    0.00042   19.8   0.0    2.1  2  PF13405.1  EF-hand domain
     0.0034   16.8   0.1       0.26   10.7   0.0    2.3  2  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   1.4e-08   4.7e-05       2      28 ..      10      36 ..       9      37 .. 0.93
   2 !    4.3   0.0    0.0076        26      16      28 ..      78      90 ..      78      91 .. 0.86

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 1.4e-08
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                ++++F+e+D+ g+G++++ E+ ++l++
  MMETSP1325-20131115|4042_1 10 ARQLFDEMDTEGSGFMDLPELERMLRH 36
                689*********************986 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0076
                EBEHHHHHHHHHH CS
  PF00036.27 16 kIsfeEfkealkk 28
                ++sf Ef++++++
  MMETSP1325-20131115|4042_1 78 QVSFAEFCQWFAR 90
                58*******9987 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   1.8e-09     6e-06       2      66 .]      10      88 ..       9      88 .. 0.84

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 1.8e-09
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels............deevrevldyifkelDkngdG..vlsfeEflqai 66
                ++++F+++D+ g+g+ d  eL+r+l+h++                ++   e +  +++e+ k g G  ++sf+Ef+q++
  MMETSP1325-20131115|4042_1 10 ARQLFDEMDTEGSGFMDLPELERMLRHHLAVEDkmnllgvvkpswHHLAVEDANVLLEEISKTGEGatQVSFAEFCQWF 88
                6899************************976668888888888884444445577799*****99999********986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.2e-07   0.00042       2      28 ..      10      36 ..       9      48 .. 0.89
   2 ?    0.2   0.0      0.25   8.6e+02      16      29 ..      78      90 ..      67      94 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 1.2e-07
                HH---GCC-------B---HHHHHHH. CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrk 28
                 r++F+ +D+ g+G+ d+ EL ++Lr+
  MMETSP1325-20131115|4042_1 10 ARQLFDEMDTEGSGFMDLPELERMLRH 36
                589**********************95 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.25
                -B---HHHHHHH.H CS
   PF13405.1 16 kidaeELrdaLrks 29
                +++++E+ +++   
  MMETSP1325-20131115|4042_1 78 QVSFAEFCQWFA-R 90
                7999***99987.4 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   7.7e-05      0.26      22      41 ..       5      24 ..       1      36 [. 0.81
   2 ?    3.9   0.0      0.01        36      42      53 ..      79      90 ..      73      91 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 7.7e-05
   PF13833.1 22 lseeevdilfrefDtdgdGk 41
                l++++++ lf+e+Dt+g+G 
  MMETSP1325-20131115|4042_1  5 LKASKARQLFDEMDTEGSGF 24
                67899*************95 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.01
   PF13833.1 42 isfeEFcvller 53
                +sf+EFc+ ++r
  MMETSP1325-20131115|4042_1 79 VSFAEFCQWFAR 90
                9******98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 864.57
//
Query:       MMETSP1325-20131115|4044_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 521.31
//
Query:       MMETSP1325-20131115|4046_1  [L=378]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-16   58.2   0.0    8.2e-16   57.3   0.0    1.4  1  PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
    2.3e-05   23.8   0.0      4e-05   23.0   0.0    1.4  1  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.3   0.0   1.2e-19   8.2e-16       2      91 ..     180     270 ..     179     273 .. 0.93

  Alignments for each domain:
  == domain 1    score: 57.3 bits;  conditional E-value: 1.2e-19
   PF07683.9   2 ssfvfrarrpfdperleallee....lpegvlRaKGivwlagkpdalvlqgvggrlrlepagawwaaledgdrrseLVfIGrdldkealeeaLd 91 
                 ++++++ ++++  + ++a++ +    ++e+v+R KG++  +++p++lvlq+v+++++ e  g++wa+   ++r   LV+IG +ld  +++e ++
  MMETSP1325-20131115|4046_1 180 NTVTITIEGEVVLSDFNAWVAKflnaNGERVYRFKGLIAAQDEPNRLVLQAVHMVFEGE-KGKPWAP--GEKRVCSLVLIGLGLDSREIREDFK 270
                 688999999999999******9998899*******************************.9999999..9*********************997 PP

>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   5.8e-09     4e-05     133     177 ..      32      75 ..      17      76 .. 0.82

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 5.8e-09
                 HHHHHHHHCT-SEEEEE-CCCTTTT..HHHHHHHHHHH-TTSEEE CS
  PF02492.14 133 pekledqlaaAdlivlnKiDlldaeadlekleedlrklnpeakvl 177
                  e++ +q+a+Ad +vlnK+Dl+d+ ++  +++  +r +np+ +vl
  MMETSP1325-20131115|4046_1  32 REEVLQQIAFADRVVLNKADLVDEGQL-LRATLAVRMVNPRCEVL 75 
                 577889*******************66.78888899999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       537  (0.0392774); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.39s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 1741.97
//
Query:       MMETSP1325-20131115|4050_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-15   56.5   0.0    3.3e-15   56.0   0.0    1.2  1  PF09273.6 Rubisco LSMT substrate-binding


Domain annotation for each model (and alignments):
>> PF09273.6  Rubisco LSMT substrate-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   2.4e-19   3.3e-15       3     128 .]      39     176 ..      37     176 .. 0.87

  Alignments for each domain:
  == domain 1    score: 56.0 bits;  conditional E-value: 2.4e-19
                 TTSTTHHHHHHHHHH--...--SE.EEEEEETTS------HHHHHHHH----GGGGGSGGGTTT--.....--TTT---HHHHHHHHHHHHHHHHHHH----S-HHHHHHH.H-....----HHHHHH-------HHHH CS
   PF09273.6   3 endpladdKaqllerlg...lset.etftlrlngpiskeLLaylRllllkeeelkelkslaesavi.....stkeaplskenEekvlqvladlcaeaLseypttleeDeallkk....adleeqkrlavrlRlgEKrIL 128
                  +dpl+d+K+  l+ +g   ++ +  +f+l  +++ ++eLL  +R l++++++l++  +  e+++         + pl ++nE+ v + + ++c+  L++yptt  +D al         l++++r+a+rlR+ EKr L
  MMETSP1325-20131115|4050_1  39 DDDPLYDEKKAFLQAAGrgdIEGQgLIFPLYNDRY-PNELLECVRMLCVTPKDLEKPGAWGEGSTMvplsaLDLTTPLDDANEALVFEAIIEACKIGLERYPTTEDDDTALMSDrrmfKGLPQNARNAIRLRRTEKRLL 176
                 58*******999888772224445579********.******************999998888888899999999*****************************99999987774444556666*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 1063.98
//
Query:       MMETSP1325-20131115|4045_1  [L=551]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-22   77.7   0.6    1.4e-21   76.6   0.4    1.5  1  PF13563.1  2'-5' RNA ligase superfamily
    1.3e-20   73.2   0.0    1.9e-20   72.6   0.0    1.3  1  PF00782.15 Dual specificity phosphatase, catalytic domain
    3.4e-05   23.0   2.4    3.4e-05   23.0   1.7    2.3  3  PF02151.14 UvrB/uvrC motif
     0.0057   16.3   0.0      0.019   14.6   0.0    1.9  1  PF04273.8  Putative phosphatase (DUF442)
  ------ inclusion threshold ------
      0.084   11.2   0.1       0.24    9.7   0.0    1.7  2  PF06957.6  Coatomer (COPI) alpha subunit C-terminus


Domain annotation for each model (and alignments):
>> PF13563.1  2'-5' RNA ligase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.6   0.4   5.2e-25   1.4e-21       4     152 ..      49     210 ..      43     211 .. 0.92

  Alignments for each domain:
  == domain 1    score: 76.6 bits;  conditional E-value: 5.2e-25
   PF13563.1   4 slaapiealrrslydkayprwppHiTLlypfvepedladlaellsrlaa..etepfevrldgvgvFeh.kks.vvylsv...........spseslsaLraallealpeagdkedstgeftPHlTiaqsedstsakellekl..agalpplefevdevallrrdgg 152
                 +l  ++++ r + +d + +rwppHiT+ ypfv+  +++++a++l+ + a  +  pf++ ++gv  F h + s +++  +               +l+a+ +  ++  peagd++   ++f+PHl+++q+ ++++ +++++ +  +g lp+ +++v+e++ll+r+g+
  MMETSP1325-20131115|4045_1  49 ELHSHVQRTR-RTHDRNERRWPPHITVSYPFVAAGHFDEAAKALEVAFAdeGVRPFDCVFTGVQDFAHgRRSfTAWAAPspvgsgtagevAAACPLQAIWRIARQLYPEAGDQR---DTFVPHLSLGQFSSQEEVDAFRASVqgEGWLPSDKVRVSEIHLLERRGD 210
                 4455688888.*************************************977789***************9999***********999999888899999999999999999999...9************************9999999999***********986 PP

>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.0   6.9e-24   1.9e-20       1     131 [.     343     477 ..     343     479 .. 0.93

  Alignments for each domain:
  == domain 1    score: 72.6 bits;  conditional E-value: 6.9e-24
                 EEE--CTCHC.HHHHHH----EEEETTSSSSEE....ECCTT---EEEE-----STT--CGGGHHHHHHHHHHHCC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-STTHHHHHHHH CS
  PF00782.15   1 lylgskstas.lalleklgitlvinvtkevpkn....nadkkseieylripvedetetkiskeleeavefiekaeqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnagflrqLleye 131
                 l+lgs + a+ l  l + g+t+v+n+ +  +++      + + +iey+r+p++d    ++ ++l++av+ +++a++ g+ v+ HC  G sRS++l++   m+++ l+ +eA+efv+ +r  + pn gf + L+++e
  MMETSP1325-20131115|4045_1 343 LFLGSLEGAQnLGALRARGVTHVLNAVEDANEApnfhEGSMDAHIEYMRCPLQDIPHCALLPHLPAAVSWMRDAIDAGGVVFAHCHSGRSRSGALVVGLVMQSHALPFEEAMEFVRTKRL-VLPNGGFRAHLRAWE 477
                 79999999999999*************8777668887455678****************************************************************************8.89999******9998 PP

>> PF02151.14  UvrB/uvrC motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2      0.75   2.1e+03      15      25 ..      79      89 ..      78      90 .. 0.83
   2 !   23.0   1.7   1.2e-08   3.4e-05       3      35 ..     259     291 ..     257     292 .. 0.92
   3 ?   -3.8   0.3       3.4   9.2e+03      20      25 ..     450     455 ..     450     456 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.75
  PF02151.14 15 aeeedFEkAAk 25
                +++ +F++AAk
  MMETSP1325-20131115|4045_1 79 VAAGHFDEAAK 89
                67789*****8 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 1.2e-08
  PF02151.14   3 llkeLeeemeeAaeeedFEkAAklRDqinalek 35 
                 l++ Le++++eA+++ed+++A +l+ q+++le+
  MMETSP1325-20131115|4045_1 259 LMAHLEAQKQEAVAAEDYDRAHELKCQLMKLEA 291
                 6788**************************996 PP

  == domain 3    score: -3.8 bits;  conditional E-value: 3.4
  PF02151.14  20 FEkAAk 25 
                 FE+A++
  MMETSP1325-20131115|4045_1 450 FEEAME 455
                 999997 PP

>> PF04273.8  Putative phosphatase (DUF442)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0     7e-06     0.019      19      97 ..     353     431 ..     341     443 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7e-06
   PF04273.8  19 diaelaeaGfksvinnRPDgeepeqpsnaavqaaaeaaglaylfvPvisge.iteddveafqralaeaegpvlayCrsGt 97 
                 ++ +l ++G   v+n+  D +e+ +  + +++a +e    + + +P  +     ++ v  ++ a++ a+g v+a+C+sG 
  MMETSP1325-20131115|4045_1 353 NLGALRARGVTHVLNAVEDANEAPNFHEGSMDAHIEYMRCPLQDIPHCALLpHLPAAVSWMRDAID-AGGVVFAHCHSGR 431
                 566788999999999999999999999999999999999999999987644146899*******97.799********94 PP

>> PF06957.6  Coatomer (COPI) alpha subunit C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   8.9e-05      0.24     102     173 ..      52     125 ..      18     134 .. 0.84
   2 ?   -1.8   0.1      0.28   7.6e+02      64     102 ..     236     275 ..     195     285 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 8.9e-05
   PF06957.6 102 sdvfvaPnkglsvsqeWankssLaadhvaaGsfetalrLLhdqlGvvnfaPlkslf..ldlyaasrssyralas 173
                 s+v  +        ++W+ + +++   vaaG f+ a + L+       + P+  +f  ++ +a +r s++a+a+
  MMETSP1325-20131115|4045_1  52 SHVQRTRRTHDRNERRWPPHITVSYPFVAAGHFDEAAKALEVAFADEGVRPFDCVFtgVQDFAHGRRSFTAWAA 125
                 44444444555566789999999999******************************8889************86 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.28
   PF06957.6  64 aeeGe..needeeegGWdveddLelPpeldvpkdkagnads 102
                 a +G+  n+++ e +   ++dd  +   l++ k++a +a++
  MMETSP1325-20131115|4045_1 236 AADGQlgNAGGAEATARRMDDDTLMA-HLEAQKQEAVAAED 275
                 33333336777777777888665554.78888877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.85u 0.37s 00:00:01.22 Elapsed: 00:00:00.52
# Mc/sec: 2539.22
//
Query:       MMETSP1325-20131115|4048_1  [L=1009]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-13   50.2   4.1    2.2e-13   49.5   2.8    1.4  1  PF13639.1  Ring finger domain
    1.5e-08   34.5   1.0    2.9e-08   33.6   0.7    1.4  1  PF12678.2  RING-H2 zinc finger
    2.5e-07   30.2   2.9    4.6e-07   29.4   2.0    1.4  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    9.8e-07   28.2   2.4    1.7e-06   27.4   1.6    1.4  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    3.4e-06   26.8   4.9       0.59   10.0   0.0    4.1  3  PF14312.1  FG-GAP repeat
    3.2e-05   23.6   1.1    5.7e-05   22.8   0.8    1.4  1  PF11793.3  FANCL C-terminal domain
    7.4e-05   22.4   0.7    0.00015   21.4   0.5    1.4  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
    8.6e-05   22.0   3.0    0.00015   21.2   2.1    1.3  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.013   15.4   2.7      0.013   15.4   1.9    1.7  2  PF12906.2  RING-variant domain
       0.32   10.6   8.4        0.2   11.3   0.3    4.0  4  PF01839.18 FG-GAP repeat


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   2.8   1.6e-16   2.2e-13       2      46 .]     842     900 ..     841     900 .. 0.90

  Alignments for each domain:
  == domain 1    score: 49.5 bits;  conditional E-value: 1.6e-16
   PF13639.1   2 eCaiCldelse....geevvrlp.CgHvfHeeCldewlrssn.........sCPlCrkp 46 
                 +Ca+C+d+l       ++vvr + C+H+fH++C++ewl++s+         sCP+Cr+p
  MMETSP1325-20131115|4048_1 842 DCAVCFDKLVPpygkIDKVVRVRgCQHLFHDKCIREWLKHSRrrnqlgtptSCPMCRTP 900
                 8********88998889*****99**************9875566889999******97 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.7   2.1e-11   2.9e-08      19      75 .]     840     898 ..     819     898 .. 0.74

  Alignments for each domain:
  == domain 1    score: 33.6 bits;  conditional E-value: 2.1e-11
   PF12678.2  19 ednCaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrk.........tCPlcr 75 
                 e++Ca+C  +l  +       gk d++  + g C+H FH +Ci++Wlk ++         +CP+cr
  MMETSP1325-20131115|4048_1 840 EEDCAVCFDKLVPPY------GKIDKVVRVRG-CQHLFHDKCIREWLKHSRrrnqlgtptSCPMCR 898
                 567999999993333......23344444555.**************97777899**********8 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   2.0   3.3e-10   4.6e-07       3      46 .]     841     899 ..     840     899 .. 0.80

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 3.3e-10
   PF13923.1   3 fsCpiCleelen.......pviltpCgHlyCkkCieqwleks........kkkCPiCrn 46 
                 + C +C+++l          v +  C+Hl++ kCi +wl++s          +CP+Cr+
  MMETSP1325-20131115|4048_1 841 EDCAVCFDKLVPpygkidkVVRVRGCQHLFHDKCIREWLKHSrrrnqlgtPTSCPMCRT 899
                 57********999999996445568****************866555444446****96 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   1.6   1.2e-09   1.7e-06       1      41 []     843     897 ..     843     897 .. 0.94

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 1.2e-09
                 -TTTSSS-SSEE........BSCTS-EE-CHHHHHHHCS.......T-----TTT CS
  PF00097.20   1 CpiCleeakepn.......elleCkHsfCskCirkilks.......rkkvkCPlC 41 
                 C++C+++++ p        ++  C+H f+ kCir++lk         + ++CP+C
  MMETSP1325-20131115|4048_1 843 CAVCFDKLVPPYgkidkvvRVRGCQHLFHDKCIREWLKHsrrrnqlGTPTSCPMC 897
                 ***************************************999888777788**** PP

>> PF14312.1  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00043      0.59      17      44 ..      41      66 ..      33      71 .. 0.77
   2 !    9.9   2.1   0.00049      0.67      12      48 ..     103     156 ..     100     157 .. 0.87
   3 ?   -3.6   0.0       7.6     1e+04      15      23 ..     193     201 ..     192     204 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00043
   PF14312.1 17 yFGssVaisgdt.avVGAygdddngtnsG 44
                +FG+s a  + + +++G +g dd+    G
  MMETSP1325-20131115|4048_1 41 NFGRSLAYADGNrLLIGVPGADDG---RG 66
                8******976655*********93...24 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00049
   PF14312.1  12 gaagDyFGssVaisgd.................tavVGAygdddngtnsGsaYv 48 
                  + +D FG+sVa  g+                 t+ VGA++ dd   n+G+ Y+
  MMETSP1325-20131115|4048_1 103 LNGDDSFGTSVAYLGNgtagvhgselydhattmTIAVGAPQTDDSARNAGALYI 156
                 5678999999999999999999999999999888**********88899**997 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 7.6
   PF14312.1  15 gDyFGssVa 23 
                  D+ G sVa
  MMETSP1325-20131115|4048_1 193 KDFLGMSVA 201
                 5999****9 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.8   4.1e-08   5.7e-05       2      66 ..     840     902 ..     839     905 .. 0.82

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 4.1e-08
                 --S-SSS--SS--------B--S-TT----B-SGGGHHHHHHHH----TTT------TTT-S--- CS
   PF11793.3   2 eveCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrslkesrqsfdvlfGeCPyCkkkis 66 
                 e +C +C+ + +      d++     C++ fH +C+ eWl+  +   q  +    +CP C+ ++ 
  MMETSP1325-20131115|4048_1 840 EEDCAVCFDKLVPPYGKIDKVVRVRGCQHLFHDKCIREWLKHSRRRNQLGT--PTSCPMCRTPVR 902
                 679*****999955555566778899***************9988777654..468*****9985 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.5   1.1e-07   0.00015      49      79 ..     863     899 ..     835     904 .. 0.71

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 1.1e-07
   PF12861.2  49 lGkckhnfhlhcilkwletetskgl......cpmcrq 79 
                 +  c+h fh++ci +wl+++  +++      cpmcr 
  MMETSP1325-20131115|4048_1 863 VRGCQHLFHDKCIREWLKHSRRRNQlgtptsCPMCRT 899
                 334**************98876643333444****96 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   2.1   1.1e-07   0.00015       3      48 ..     841     902 ..     840     904 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.1e-07
   PF13920.1   3 ktCvvCler........eadvlllpCgHlclCeeCaerllk.........rkkkCpiCrspie 48 
                 + C vC+++        ++ v +  C+Hl +  +C +++lk         +  +Cp+Cr+p++
  MMETSP1325-20131115|4048_1 841 EDCAVCFDKlvppygkiDKVVRVRGCQHL-FHDKCIREWLKhsrrrnqlgTPTSCPMCRTPVR 902
                 67******87776665555677888****.**********9********************96 PP

>> PF12906.2  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       6.2   8.5e+03      13      21 ..     672     680 ..     666     682 .. 0.79
   2 ?   15.4   1.9   9.2e-06     0.013       1      47 []     843     897 ..     843     897 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 6.2
                 ..------- CS
   PF12906.2  13 plirpCkCk 21 
                 +l + C C 
  MMETSP1325-20131115|4048_1 672 ALAETCGCD 680
                 68999*996 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 9.2e-06
                 ETTTTEE-----...---------TTS--HHHHHHHHHHHT-SB.......-S-- CS
   PF12906.2   1 CriCleeeeese.plirpCkCkGslklvHesCleeWlkesaktk.......CelC 47 
                 C +C+++   +  ++ +  + +G  +l+H +C++eWlk+s++++       C +C
  MMETSP1325-20131115|4048_1 843 CAVCFDKLVPPYgKIDKVVRVRGCQHLFHDKCIREWLKHSRRRNqlgtptsCPMC 897
                 77788777766676666666677778*************5555556777779999 PP

>> PF01839.18  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.87   1.2e+03      19      33 ..      55      70 ..      54      71 .. 0.65
   2 ?   -2.1   0.1       2.3   3.1e+03       9      13 ..     102     106 ..      98     107 .. 0.82
   3 ?    1.2   0.0      0.21   2.9e+02      18      34 .]     137     157 ..     137     157 .. 0.85
   4 ?   11.3   0.3   0.00014       0.2      13      33 ..     213     238 ..     211     238 .. 0.93

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.87
                EEETEECTCE..--EEE CS
  PF01839.18 19 avGpmggghn..Gavyv 33
                ++G  +g+++  G+v++
  MMETSP1325-20131115|4048_1 55 LIG-VPGADDgrGQVWI 70
                566.6677775777776 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 2.3
                 -TT-- CS
  PF01839.18   9 DfnGD 13 
                 D+nGD
  MMETSP1325-20131115|4048_1 102 DLNGD 106
                 ****9 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.21
                 EEEE.T..EECTCE.--EEEE CS
  PF01839.18  18 lavG.p..mggghn.Gavyvy 34 
                 +avG p  ++++ n Ga+y++
  MMETSP1325-20131115|4048_1 137 IAVGaPqtDDSARNaGALYIL 157
                 799997888888888****97 PP

  == domain 4    score: 11.3 bits;  conditional E-value: 0.00014
                 --S-EEEEE.T...EECTCE.--EEE CS
  PF01839.18  13 DGrpDlavG.p...mggghn.Gavyv 33 
                 DG+ D+avG p   +++g+n G+++v
  MMETSP1325-20131115|4048_1 213 DGLLDVAVGmPgwsKSFGNNrGGGWV 238
                 9********96799*********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1009 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.39u 0.33s 00:00:01.72 Elapsed: 00:00:00.86
# Mc/sec: 2811.54
//
Query:       MMETSP1325-20131115|4052_1  [L=379]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-75  253.4   0.0    3.1e-75  253.2   0.0    1.0  1  PF00155.16 Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.2   0.0   2.3e-79   3.1e-75      40     362 ..       2     330 ..       1     331 [. 0.96

  Alignments for each domain:
  == domain 1    score: 253.2 bits;  conditional E-value: 2.3e-79
                 -------CCHHHHHHHHH-..--HHHHTT-EEEE--------HHHHHCCHHH.HSS--EEEEECS--TCHHHHHHH---EEEEEE-EETTTTEE-HHHHHHHHTT--SS-E...EEE-SSS-S-------HHHHHHHHHHHHHTT-EEEEEES-------.-..HHHHHHHHHHH-S-EEEEE--CCCCTBGGG----EEEE-.......HHHHHHHHHCCTTTS..-----CCHHHHCTSHHHHHH...HHHHHHHHHHHHHHHHHHCC.CC....-TCHHHH----EE-----HH......HHHCCH---BE--........---EE-----TTTHHHHHHH CS
  PF00155.16  40 ygpidglpeleealakflg..rseklklkreaavvvgsGagaliealifllk.lnpgdeilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvvlvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsl..davatranveeepnllivgslsKafGlaGeRvGyilgna.......avvsqlrklsrpfls..ssllqaavaaalsdallkqs...eleemrqrlqkrrkelrdeLael....glkvlasqsgmflltdlsaetakelskkLleevgvyvtpgtsftvpgrlRitvAglteeeleelvea 362
                 y  i g p++ e+  +f+    s  l++ r aav+ +sG+gal+  ++  +k + +g+ +++p+p+++++++i+ ++g+ v +y +y++ +++l++ +++++l +ap g+    ++l++++hNPtG+++t+e+++++ d++k++n+ +f+D aY+gf++g+   da a+r++vee+ n+l+++s+sK+fGl+GeRvG+++++        +v sq+++l+rp++s  + +++++v+++l+d+ lk++   e  em++r+++ r+ l+++La++     + +++ q+gmf++++l++e      +++++++ vy+t         ++Ri++Ag+t+ ++e+l++a
  MMETSP1325-20131115|4052_1   2 YAGIAGVPDFVEKSLEFAYgqASTPLAEGRVAAVQAISGTGALRIGANLYAKfAGAGTPFYLPAPSWGNHTPIFGHAGLDVKQYTYYDPSTCGLNFTGMLDDLIKAPDGSM---FLLHACAHNPTGVDPTEEQWREISDVMKQKNHAIFFDCAYQGFASGDAekDAFAVRHFVEEGHNILLAQSYSKNFGLYGERVGALSAVLatpeeaaKVESQMKILVRPMYSnpPVYGARLVSTILRDPTLKAEwagECLEMAERINSVRELLVSNLAAAgsirSWGHITDQIGMFCYSGLTKE----EVEAIRDKHSVYMTL--------DGRISMAGVTSGNVEYLAQA 330
                 7788999**********998888899999*******************99985668999****************************************************...**********************************************999999999********************************7669*****************************************************************999***********************9....4555***********........*****************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 1713.62
//
Query:       MMETSP1325-20131115|4053_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-14   51.7   1.9    7.5e-14   51.3   1.3    1.1  1  PF01544.13 CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> PF01544.13  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   1.3   5.5e-18   7.5e-14     186     259 ..      12      85 ..       4      95 .. 0.92

  Alignments for each domain:
  == domain 1    score: 51.3 bits;  conditional E-value: 5.5e-18
  PF01544.13 186 lteedkeylrdlldelerllemaealrerlrslqdtylsllsnrlNrimkvLTvvtaiflPltlitGiyGMNfk 259
                 + e+++  + +l  el+++  +++++  +l+ ++ +++ ll++++N+++ +LT++t + +P+ l tG+yGMNf+
  MMETSP1325-20131115|4053_1  12 FFENEESWFAHLGHELTQIQTETKHMFAMLSEISKLHHKLLDQQMNQTLFTLTMMTSMAIPMQLFTGMYGMNFQ 85 
                 44555568999**************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       557  (0.0407402); expected 273.4 (0.02)
Passed bias filter:                      437  (0.0319631); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.68
# Mc/sec: 482.80
//
Query:       MMETSP1325-20131115|4051_1  [L=955]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-53  179.9   0.0    5.9e-42  143.4   0.0    2.9  3  PF03133.10 Tubulin-tyrosine ligase family
    7.6e-05   21.5   0.1      0.026   13.2   0.0    2.5  2  PF14398.1  YheC/D like ATP-grasp
     0.0013   17.7   0.0        0.8    8.6   0.0    2.3  2  PF14397.1  Sugar-transfer associated ATP-grasp
      0.005   16.5   0.0      0.013   15.1   0.0    1.7  1  PF13535.1  ATP-grasp domain
     0.0055   16.4   0.0      0.093   12.4   0.0    2.3  2  PF02655.9  ATP-grasp domain
  ------ inclusion threshold ------
      0.028   13.7   0.0        3.2    7.0   0.0    2.5  3  PF08443.6  RimK-like ATP-grasp domain


Domain annotation for each model (and alignments):
>> PF03133.10  Tubulin-tyrosine ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.4   0.0   2.6e-45   5.9e-42       8     183 ..     302     479 ..     295     492 .. 0.92
   2 ?   -0.4   0.0      0.17   3.8e+02     177     232 ..     531     592 ..     522     595 .. 0.75
   3 !   32.2   0.1     2e-11   4.6e-08     232     267 ..     619     654 ..     608     659 .. 0.88

  Alignments for each domain:
  == domain 1    score: 143.4 bits;  conditional E-value: 2.6e-45
  PF03133.10   8 dqllnhfpesseitrkdllvknlkrtkkkeekklkflprtfvlpadlrefveeaekees......ntwIvKpsasarGkgIrvfnklsdilkivsqsqkeplvvqkYierPLLidgrKFDlRlyvlvtsvnpLrvYvYkegllRfasvkYsp.svsdlddlevHLTNysiqkkssslneesne 183
                 + ++  f+++  +  kd  +  lkr+  ++  +  f pr + lp++   f +    +++      +t+IvKps+++ G+gI+++++ +d+++ +    ++ +v+q+Yi +PLL+dg KFDlR+yvl+ sv+pLr+Yv +egl+R++s+kY + + s+l d + HLTNys++k+    n+ + +
  MMETSP1325-20131115|4051_1 302 HARYSRFEGMRNLAMKDQTMAALKRMAAIFPDSVGFNPRGWHLPEESSTFDDVLAANKRrklrsrQTYIVKPSQGSEGNGIFLVQTPKDMPR-HVFDRRNGWVAQQYIANPLLLDGYKFDLRIYVLLCSVDPLRAYVCSEGLVRLCSEKYAKpKASNLRDAYSHLTNYSLNKH----NDAYVH 479
                 778899999********9999*******************************999988889******************************8.8889999***************************************************99********************....444444 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.17
  PF03133.10 177 lneesnekkgkkwslqelekylee...irkeeiweeiesiiiktilaae...veasrlnvqr 232
                 + +e     g+k+ l++l + lee   + k+++w+ + +++ kt++a +   + a r+n+ +
  MMETSP1325-20131115|4051_1 531 EGNEAAGVGGSKRYLSDLLEGLEEqglMAKKDFWDGLTDVVAKTLVAYQptlALAYRQNFPP 592
                 455555566778888888888888899*******************9987666666666655 PP

  == domain 3    score: 32.2 bits;  conditional E-value: 2e-11
  PF03133.10 232 rlkncfelyGvDilidenlkpwLlEvNasPdlkstt 267
                 ++ +cf++ G+D+++de++k  LlEvN++P+l+ t 
  MMETSP1325-20131115|4051_1 619 DSFHCFQIVGFDVMLDEDFKFHLLEVNSNPSLSITH 654
                 6789****************************8775 PP

>> PF14398.1  YheC/D like ATP-grasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0027       6.3      55      78 ..     366     389 ..     353     408 .. 0.81
   2 !   13.2   0.0   1.1e-05     0.026     209     242 ..     624     657 ..     613     663 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0027
   PF14398.1  55 ykkvylKPasGskGkgiirltkke 78 
                  +  ++KP +Gs+G gi+ ++  +
  MMETSP1325-20131115|4051_1 366 RQTYIVKPSQGSEGNGIFLVQTPK 389
                 556789************998765 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 1.1e-05
   PF14398.1 209 lgELGlDlglDkegriWllEvNskPgkksfkeak 242
                 ++  G+D+ lD++ +  llEvNs P+ ++ ++++
  MMETSP1325-20131115|4051_1 624 FQIVGFDVMLDEDFKFHLLEVNSNPSLSITHDVE 657
                 6789***********************9999865 PP

>> PF14397.1  Sugar-transfer associated ATP-grasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0014       3.2      71      96 ..     364     389 ..     316     413 .. 0.74
   2 !    8.6   0.0   0.00035       0.8     229     263 ..     618     651 ..     612     676 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0014
   PF14397.1  71 eepkelvvKpvdgsgGkgieileadd 96 
                 +++++++vKp++gs G+gi ++++ +
  MMETSP1325-20131115|4051_1 364 RSRQTYIVKPSQGSEGNGIFLVQTPK 389
                 3459***************9987654 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00035
   PF14397.1 229 arrlpkvrliGWDvAiteeg.pvliEgNtnqvpgve 263
                 a +++ ++++G+Dv ++e+  + l+E+N+n  p+  
  MMETSP1325-20131115|4051_1 618 ADSFHCFQIVGFDVMLDEDFkFHLLEVNSN--PSLS 651
                 568999*************88*********..5444 PP

>> PF13535.1  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.5e-06     0.013      35     100 ..     358     419 ..     326     467 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 5.5e-06
   PF13535.1  35 aeeig.......fpvvlKPadgagslgvrrvddaaeleaalealaaeveldegeflvEeyieGdeysvdglvl 100
                     +        ++++KP++g+  +g+++v+++++  ++   + ++++     +++++yi  ++  +dg+ +
  MMETSP1325-20131115|4051_1 358 N---KrrklrsrQTYIVKPSQGSEGNGIFLVQTPKDMPRH---VFDRRN----GWVAQQYIANPLL-LDGYKF 419
                 2...2444666679**************************...555555....8999999995443.333333 PP

>> PF02655.9  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   4.1e-05     0.093      25      71 ..     360     409 ..     319     411 .. 0.84
   2 ?    1.1   0.0      0.12   2.8e+02     131     156 ..     621     646 ..     599     650 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.1e-05
   PF02655.9  25 eeleeeekklvvKprdGaGgesvrvvenkeeaeealeele...vvqefie 71 
                  ++ ++ ++++vKp +G+ g+++++v+  +++ + + +     v+q++i 
  MMETSP1325-20131115|4051_1 360 RRKLRSRQTYIVKPSQGSEGNGIFLVQTPKDMPRHVFDRRngwVAQQYIA 409
                 55667799*******************9988877655544588***9995 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.12
   PF02655.9 131 legllGyvGvDlvlkd.eepyviEvNP 156
                 +  ++ +vG D++l +  + +++EvN+
  MMETSP1325-20131115|4051_1 621 F-HCFQIVGFDVMLDEdFKFHLLEVNS 646
                 5.67789*******9867999*****7 PP

>> PF08443.6  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.9   6.5e+03      91     109 ..     310     328 ..     306     329 .. 0.86
   2 ?    7.0   0.0    0.0014       3.2      41      96 ..     368     425 ..     350     430 .. 0.77
   3 ?    3.8   0.0     0.014        32     147     173 ..     625     652 ..     607     662 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 2.9
   PF08443.6  91 diRvlVvgdevvaalervs 109
                  +R l + d+ +aal+r++
  MMETSP1325-20131115|4051_1 310 GMRNLAMKDQTMAALKRMA 328
                 6999999********9985 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0014
   PF08443.6  41 PvvvKsvfgsqGikvvlaedkqsl.eqlleafkqlkeailvQefIeeaen.....rdiRvlV 96 
                   +vK+++gs G +++l+++++++ + +++     ++  + Q++I+++        d+R++V
  MMETSP1325-20131115|4051_1 368 TYIVKPSQGSEGNGIFLVQTPKDMpRHVFDR----RNGWVAQQYIANPLLldgykFDLRIYV 425
                 569***************9976652667666....788899999998743333446777776 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.014
   PF08443.6 147 dvlgvD.ileskrgllvlEvNssvglkk 173
                 +++g D +l+++  + +lEvNs++ l  
  MMETSP1325-20131115|4051_1 625 QIVGFDvMLDEDFKFHLLEVNSNPSLSI 652
                 68999*8999999***********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (955 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.34u 0.35s 00:00:01.69 Elapsed: 00:00:00.80
# Mc/sec: 2860.65
//
Query:       MMETSP1325-20131115|4054_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 592.04
//
Query:       MMETSP1325-20131115|4056_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1025  (0.0749707); expected 273.4 (0.02)
Passed bias filter:                      539  (0.0394236); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 568.55
//
Query:       MMETSP1325-20131115|4057_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.011   14.1   0.2      0.013   13.9   0.1    1.1  1  PF00083.19 Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> PF00083.19  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   9.6e-07     0.013     405     451 .]       3      49 ..       1      49 [. 0.93

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 9.6e-07
  PF00083.19 405 fpiiteaigggyvflvfagllvlfilfvfffvpetkgrtleeieelf 451
                 f ++ +aig++ +f+  a+++ +++++    +petkg+ leei++lf
  MMETSP1325-20131115|4057_1   3 FLSLCNAIGKPLTFFGLAAIAFAGFFWLRKSLPETKGLALEEIHALF 49 
                 7788899**9*********************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 647.90
//
Query:       MMETSP1325-20131115|4049_1  [L=1364]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-17   60.6   0.0    1.8e-16   59.7   0.0    1.4  1  PF00787.19 PX domain


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   0.0   1.3e-20   1.8e-16      15     111 ..      56     162 ..      43     164 .. 0.89

  Alignments for each domain:
  == domain 1    score: 59.7 bits;  conditional E-value: 1.3e-20
                 .CETSSEEEEEEEECS-SCEEEEEEEHHHHHHHHHHHHHHTT........TSTSTS--TTSSSHHC.GTTSHHHHHHHHHHHHHHHHHHHHSCHHHH.SHHHHHHHH CS
  PF00787.19  15 gskkhsyylievelktgakewtvkRrYsdFeeLhskLlrkfp........rlklPplPkkvlfgsv.rkkdeefiekrrkgLeeyLqrllnhpelrk.sevltsFLe 111
                 ++ k++y+++ ++++tg k+w+v RrY++F  Lh++L+++ +        ++ lP lP+k    s+  + d++f+++rr++L+eyL+ l++ +++   ++ l+sFL+
  MMETSP1325-20131115|4049_1  56 RNTKGTYMMFGIRVTTGIKSWHVLRRYREFALLHKHLKKFAKenpdmaaaNVNLPALPPKEAKLSFgSSVDPAFVAERRAQLQEYLRVLITLKFVWHaNSGLASFLD 162
                 78999******************************************************99655446699**********************999888999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1364 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       503  (0.0367905); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.79u 0.36s 00:00:02.15 Elapsed: 00:00:01.06
# Mc/sec: 3083.61
//
Query:       MMETSP1325-20131115|4058_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-27   94.8   0.0      4e-27   94.4   0.0    1.2  1  PF02780.15 Transketolase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02780.15  Transketolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.4   0.0   2.9e-31     4e-27       7     124 .]      70     190 ..      59     190 .. 0.95

  Alignments for each domain:
  == domain 1    score: 94.4 bits;  conditional E-value: 2.9e-31
                 ETTECEEEEEESTHHHHHHHHHHHHHTT..T-EEEEEEESEEESSBHHHHHHHHHHHSCEEEEESSECEEEEHCHHHHHHHH.HSGGG-SSEEEEEEEESSSHHSS.HHHHHHHS--HHHHH CS
  PF02780.15   7 regkdvtivayGsmveealeAaeeLake..gisaevidlrtvkPlDeetidesvkktgrlvvveeavkigGigaevaaalae.egftkldapvrrvggpdvpipha.palelaylgltaeki 124
                 + + +v+i++ G+ + +aleAa++L+++   ++++v d+r++kPlD +++++++++   l++vee++ igG+g++v+++la   ++++ d++vr +++pd++i+ a ++++++++gl+a++i
  MMETSP1325-20131115|4058_1  70 KAKIKVAILSIGTRLGQALEAANTLEENdpDLGVTVADARFMKPLDIDLLRKLADENSVLLTVEEGS-IGGFGDHVLHFLAGdGALDNGDLKVRPMVLPDAFIETAaQSEQYDAAGLNAKHI 190
                 56779*************************************************************9.**************99**********************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 1066.61
//
Query:       MMETSP1325-20131115|4055_1  [L=744]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-11   44.0   0.0    2.9e-11   43.4   0.0    1.2  1  PF00656.17 Caspase domain
     0.0027   16.9   0.0     0.0055   15.9   0.0    1.5  1  PF01650.13 Peptidase C13 family
  ------ inclusion threshold ------
      0.046   12.5   0.0      0.073   11.9   0.0    1.2  1  PF01364.13 Peptidase family C25


Domain annotation for each model (and alignments):
>> PF00656.17  Caspase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.0   6.3e-15   2.9e-11      15     147 ..       8     144 ..       2     296 .. 0.72

  Alignments for each domain:
  == domain 1    score: 43.4 bits;  conditional E-value: 6.3e-15
                 ------HHHHHHHHHHHHHTT-EEEE.........EES--HHHHHHHHHHHHTCSGTBS-EEEEEEE----...B----BE-SSSE-B-HHH......HHHTTSTTT-GGGTTS-E.EEEEES---EETB---EEE-S--SSS- CS
  PF00656.17  15 aeLrGcvnDvermaklLkrlgFeveni.......liddptgknirkalkelvksaksgDvlvvhysGHGtrvpaegededtgydecivpvdkn...lildddfrdlvckslpekpk.tiilDaChsgglideakeqigestkkk 147
                 ++L   + Dv +++ +L+    +veni        ++++t++ ++++l++l   a++gDv+v++y+GHGt      ++     d++i   d     +  d d +  +    +++ k +++ D+Chsg l +   e+++++  + 
  MMETSP1325-20131115|4055_1   8 NPLPDVIDDVVAVKTFLEDECPAVENItrfvgrdDTNSLTRQSFLNKLDTLL--AHDGDVFVLYYAGHGTGG----SGALCMQDGYITFEDLVnawVGFDTDKTRAQRY-ARRGKKfVVVADSCHSGALVRQLRETHEQRRRDG 144
                 8999999**********99999****999977666666**************..889************994....455555566665333322222223222222222.3445578***************999877665544 PP

>> PF01650.13  Peptidase C13 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.2e-06    0.0055     103     170 ..      60     136 ..      42     174 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.2e-06
  PF01650.13 103 sgkeDnvfiyltdhGapg..vlevpeeddleakdLaeaL....kkmhakkky....kklviyleaceSgsmfeellkd 170
                   + D   +y++ hG+ g   l +  + +++ +dL +a     +++ ++++y    kk+v++ ++c Sg ++ +l + 
  MMETSP1325-20131115|4055_1  60 AHDGDVFVLYYAGHGTGGsgALCMQ-DGYITFEDLVNAWvgfdTDKTRAQRYarrgKKFVVVADSCHSGALVRQLRET 136
                 566788999*****98877799999.9*********9953333234445566555589**************998653 PP

>> PF01364.13  Peptidase family C25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.6e-05     0.073     225     285 ..      44     129 ..      20     138 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.6e-05
  PF01364.13 225 l.lttqnllkalnq.....Gvlfvny.tGHGsetaw..............adesl....stndisaltntnklpiaisaaCltgaf 285
                   lt+q++l++l++     G  fv y  GHG + +                + ++    + + ++++   +k +++++++C++ga 
  MMETSP1325-20131115|4055_1  44 NsLTRQSFLNKLDTllahdGDVFVLYyAGHGTGGSGalcmqdgyitfedlVNAWVgfdtDKTRAQRYARRGKKFVVVADSCHSGAL 129
                 4577788888887777777666665526***9887666776666655555444445566999999999999*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (744 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.11u 0.38s 00:00:01.49 Elapsed: 00:00:00.60
# Mc/sec: 2971.48
//
Query:       MMETSP1325-20131115|4059_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 377.30
//
Query:       MMETSP1325-20131115|4060_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-07   29.7   0.1    5.8e-07   29.0   0.1    1.4  1  PF13242.1 HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> PF13242.1  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.1   4.2e-11   5.8e-07       3      56 ..      64     138 ..      62     165 .. 0.70

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 4.2e-11
                 ---.....STHHHHHHH---....-GGTTTEEEE---.HHHHHHHHH---.EE----------...........T CS
   PF13242.1   3 gKP.....npgmydkalevl....gappsevvmiGDslatDieaAnaaGi.rsilVltGvsre...........e 56 
                 gKP     + g+yd al+ l      ++++v+m+GD ++tDi +A +  +  s+l+  G+++e           +
  MMETSP1325-20131115|4060_1  64 GKPynsagTTGVYDTALAILaeqgVTDLERVCMVGDAMETDICGAARNALgGSVLIGHGIHSEalgleqgkgsgK 138
                 566666556899********66554459**************99876665489*******999555555555550 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 833.73
//
Query:       MMETSP1325-20131115|4061_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|4062_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   8.2e-103  342.5   0.1   9.5e-103  342.3   0.1    1.0  1  PF03332.8  Eukaryotic phosphomannomutase
      2e-06   27.4   0.0      5e-06   26.1   0.0    1.6  1  PF08282.7  haloacid dehalogenase-like hydrolase
     0.0015   17.8   0.0        0.7    9.0   0.0    2.1  2  PF05116.8  Sucrose-6F-phosphate phosphohydrolase
  ------ inclusion threshold ------
      0.093   13.1   0.0       0.16   12.4   0.0    1.4  1  PF00702.21 haloacid dehalogenase-like hydrolase
        0.1   12.6   0.0       0.16   12.0   0.0    1.3  1  PF12710.2  haloacid dehalogenase-like hydrolase
       0.14   10.9   0.0       0.21   10.3   0.0    1.3  1  PF02358.11 Trehalose-phosphatase


Domain annotation for each model (and alignments):
>> PF03332.8  Eukaryotic phosphomannomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  342.3   0.1  4.2e-106  9.5e-103       2     218 ..      36     249 ..      35     250 .] 0.99

  Alignments for each domain:
  == domain 1    score: 342.3 bits;  conditional E-value: 4.2e-106
                 HHHHHHHHTTSB---B----HHHHHHH--.--HHHH-SEE-S-----EEE---EEE---HHHH---HHHHHHHHHHHHHHTT---S------SEE----EE---------HHHHHHHHHHHHHH-HHHHHHHHHHHHT-----EEE-------EEE-----GGGGGGGTTT----EEEEE-----------HHHHSTTEE----SSHHHHHHHH.HH CS
   PF03332.8   2 keflkklrkkveigvvgGsdlekikeqlageevldefdyvfsenGlvaykkgkelasqsiqkalgeeklkklinfvlryladldlPvkrGtfiefrngllnvsPiGrncsqeernefeeydkkhkireklveelkeefadlgltfsiGGqisfdvfPkgWdktyclqhvekdsfdeihffGdktaeGGndyeifadprtighsvtspedtvkkleel 218
                   fl+ lr kv+ig+vgGsdl+k++eql g++vl+ fdy+fsenGl+a+k+g ++ +qsi ++lge++l++lin+vl yl+++ lP krGtfiefr g+lnvsP+Grncsqeer+ fe yd +h+ir+++v ++k efadl+ltfsiGGqisfdvfP+gWdkt++lq+v++  f+eihffGdkt+eGGndyei++d rtigh+vt p+dt+k++ e+
  MMETSP1325-20131115|4062_1  36 LAFLADLRTKVTIGFVGGSDLKKQEEQL-GKDVLSMFDYCFSENGLMAFKDGVKIGQQSIATHLGEDNLQRLINWVLAYLSNITLPCKRGTFIEFRAGMLNVSPVGRNCSQEERDAFEIYDGEHNIRSTMVTAMKAEFADLNLTFSIGGQISFDVFPQGWDKTFALQFVSE--FEEIHFFGDKTHEGGNDYEIYEDSRTIGHAVTCPDDTMKICAEI 249
                 6799************************.7*******************************************************************************************************************************************99..*****************************************998 PP

>> PF08282.7  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   2.2e-09     5e-06       2     207 ..      17     211 ..      16     236 .. 0.80

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 2.2e-09
                 EE------S-TTS---HHHHHHHHHHHHTT-EEEEEESS-HHHHHCCHCHTTCC.....SEEE-E---EE.CCTTEEEEE----....CCHHHHHHHHHHHCTSEEEEE---EEEEC-TT-HHHHHHHCCCTSCEEEES-HCCHS-S--SEEEEE--GGGHHHHHHHHHCCTTTTCEEEEEETTEEEEEE----HHHHHHHHHHHTT--GGGEEE CS
   PF08282.7   2 asDlDGTLlnsdkkiseetkeaikklqekgikvviaTGRslsevlplleelgld.....lpvialNGaliddekgeilsknels....keavkeiikllkennleillytedkvyvinkksekkakeeeknkkkkeekkeeeelededinkililedkedldelekelkeelnklititsssegsleiipkgvsKgtalkklakalnisleevia 207
                  +D+DGTL    k++s+e  + ++ l+   +++ ++ G +l++ ++   +lg d      ++ + NG +  +++g  + ++++     +++++++i+++  +  +i l  +++++++           + n + +  + ++ee++ ++i+    +   + ++++++e+++ +   +t++  ++ s+++ p+g++K  al+++ ++     ee+  
  MMETSP1325-20131115|4062_1  17 LFDVDGTLTPARKEVSPEMLAFLADLR-TKVTIGFVGGSDLKKQEE---QLGKDvlsmfDYCFSENGLMA-FKDGVKIGQQSIAthlgEDNLQRLINWVLAYLSNITLPCKRGTFIEFR-------AGMLNVSPVGRNCSQEERDAFEIYDGEHNIRSTMVTAMKAEFADLN---LTFSIGGQISFDVFPQGWDKTFALQFVSEF-----EEIHF 211
                 69*************************.89********86665555...444334447799*********.777777766666666669************999999999999999888.......8888999999999999998888877666666666666666666553...389999999******************955.....44444 PP

>> PF05116.8  Sucrose-6F-phosphate phosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00031       0.7       2     107 ..      13     117 ..      12     123 .. 0.82
   2 !    6.9   0.0    0.0013         3     136     175 ..     164     205 ..     152     235 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00031
                 SEEEEE-TBTTTB.--HHHHHHHHHH--.-----EEEEEE----HHHHHHHHHH------SEEEE----EEE-..-----HHHHHHHHTT--HHHHHHHH---TTE CS
   PF05116.8   2 klllvsdLDntlvdgdnealarlnelleaeerkdvllvfaTGRsldsakellkeknllkPdvlitsvGteiyygeelvpdkaweeildekwdrqavvevlaklpeL 107
                 k++++ d+D+tl +  +e   ++ ++l  + r +v+++f+ G  l++++e l +  l   d++  + G +  +    + +++ + +l e+  ++ +  vla l+++
  MMETSP1325-20131115|4062_1  13 KVIFLFDVDGTLTPARKEVSPEMLAFLA-DLRTKVTIGFVGGSDLKKQEEQLGKDVLSMFDYCFSENGLMAFKDGVKIGQQSIATHLGEDNLQRLINWVLAYLSNI 117
                 578999*******99999999******9.99********************9999999999999988888777667777777777777766666666666666655 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0013
                 HHHHHHT----EEEEEE--..-EEEEEETT-----HHHHHHH CS
   PF05116.8 136 leqlLekreldvkviyssg..kdlDilPkraskgeAlryLak 175
                 + ++++++  d+++ +s g    +D+ P++ +k  Al++ ++
  MMETSP1325-20131115|4062_1 164 MVTAMKAEFADLNLTFSIGgqISFDVFPQGWDKTFALQFVSE 205
                 445556666667777776511578**************9875 PP

>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.8e-05      0.16       4      33 ..      16      43 ..      14     114 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 6.8e-05
                EEEECCTTTBETHHHHHHHHHHHHHHHHHC CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00702.21  4 vvfDktGTLtegepsvlgnkaalalaaale 33
                ++fD++GTLt  ++ v    ++la++a+l 
  MMETSP1325-20131115|4062_1 16 FLFDVDGTLTPARKEV--SPEMLAFLADLR 43
                89**************..555555555552 PP

>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     7e-05      0.16       1      33 [.      16      52 ..      16     174 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7e-05
                EEE------B---...............HHHHHHHHH-- CS
   PF12710.2  1 avFDkDGTLtedd....tdflryllk..lldvlgealak 33
                ++FD+DGTLt+       ++l++l++      ++  ++ 
  MMETSP1325-20131115|4062_1 16 FLFDVDGTLTPARkevsPEMLAFLADlrT--KVTIGFVG 52
                58***********5444444444444431..22222222 PP

>> PF02358.11  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   9.3e-05      0.21       1      54 [.      17      65 ..      17      93 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 9.3e-05
  PF02358.11  1 flDydGTlspivedpdaavpsdellslLkkLasdpknvvaiiSGrslee..edlfv 54
                ++D dGTl+p  +      +s+e+l  L +L +++   + ++ G++l++  e+l  
  MMETSP1325-20131115|4062_1 17 LFDVDGTLTPARK-----EVSPEMLAFLADLRTKVT--IGFVGGSDLKKqeEQLGK 65
                69******99887.....9*************9988..********9996444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.72
# Mc/sec: 832.07
//
Query:       MMETSP1325-20131115|4063_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.42s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 1059.19
//
Query:       MMETSP1325-20131115|4064_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 788.80
//
Query:       MMETSP1325-20131115|4065_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 662.52
//
Query:       MMETSP1325-20131115|4066_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-07   30.7   0.0    2.9e-07   29.7   0.0    1.6  1  PF07883.6  Cupin domain
      4e-06   26.2   0.0    5.7e-06   25.7   0.0    1.2  1  PF00190.17 Cupin
  ------ inclusion threshold ------
       0.12   11.9   0.0       0.19   11.3   0.0    1.5  1  PF02311.14 AraC-like ligand binding domain


Domain annotation for each model (and alignments):
>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   6.3e-11   2.9e-07       2      63 ..      54     121 ..      53     129 .. 0.83

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 6.3e-11
                 EEEE----EE-EBE-TT-EEEEEEEE--EEEEE-..TE.....EEEE-TT-EEEE-TT-EBEEB--SSS CS
   PF07883.6   2 lvelppGesapshrHpgedeffyVleGegeltvd..ge.....eveleaGdsvyfpagtpHrfrNtgde 63 
                 ++ ++pG+  ++h H+   e+f +  G +e+     g+     + +l+aGd++ +p+g+pH + ++ d+
  MMETSP1325-20131115|4066_1  54 VMDYAPGQLLQPHKHDLD-ELFEIRGGSVEVSTWpeGKegkkeTKILKAGDLIEIPSGVPHSLCCDKDA 121
                 799**************8.*********999743343335566******************98777665 PP

>> PF00190.17  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   1.2e-09   5.7e-06      35     108 ..      51     119 ..      39     128 .. 0.80

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 1.2e-09
                 EEEEEEE-TTEEEEEEEESSEEEEEEEE-EEEEEEEES.......EEEEEEEEE----EEEE-TT-EEEEEEES CS
  PF00190.17  35 aarrvliepgglllPhysnapeilyvlqGrgrlgvvvpgcpeqsrrdehqkvrlreGdviviPagvahwlyndg 108
                 +ar+   +pg ll Ph ++ +e++ +  G+  + +  +g+    +++ + k  l+ Gd+i iP+gv+h l  d 
  MMETSP1325-20131115|4066_1  51 SARVMDYAPGQLLQPHKHDLDELFEIRGGSVEVSTWPEGK----EGKKETK-ILKAGDLIEIPSGVPHSLCCDK 119
                 4455555*************************77777766....3555555.7***************987664 PP

>> PF02311.14  AraC-like ligand binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   4.1e-05      0.19      43      83 ..      97     137 ..      51     155 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4.1e-05
                 E------EEEE-----EEE---TTSEEEEEEEEE---GGGG CS
  PF02311.14  43 ydlgpGdlfLlppgepHdyesdsedgweyrwlyfegeller 83 
                   l++Gdl+ +p g+pH++  d+++g++++ l  eg+++++
  MMETSP1325-20131115|4066_1  97 KILKAGDLIEIPSGVPHSLCCDKDAGLQFHELVGEGTEVFA 137
                 679********************999999988888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 798.79
//
Query:       MMETSP1325-20131115|4068_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0017   17.7   1.4       0.36   10.1   0.1    2.3  2  PF13266.1  Protein of unknown function (DUF4057)
  ------ inclusion threshold ------
      0.021   14.3   0.2        1.9    8.1   0.0    2.3  2  PF07577.6  Domain of Unknown Function (DUF1547)
      0.026   13.9   0.0        2.9    7.3   0.0    2.8  3  PF11776.3  Domain of unknown function (DUF3315)
          1   10.0   6.7        3.5    8.3   0.1    3.2  3  PF00835.14 SNAP-25 family


Domain annotation for each model (and alignments):
>> PF13266.1  Protein of unknown function (DUF4057)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.1    0.0012         4     269     301 ..      11      50 ..       2      51 .. 0.65
   2 !   10.1   0.1   0.00011      0.36     271     302 .]     110     147 ..      91     147 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0012
   PF13266.1 269 kems.GsdiFadgka.....esrdylg.gvRkPPGGessi 301
                  +ms  s+ Fa+g +        d+   +   PPGG+ss 
  MMETSP1325-20131115|4068_1  11 NNMSqSSNAFANGSNqncgnVITDRSTtRLHAPPGGQSSF 50 
                 56762468899999833333223433337889******96 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00011
   PF13266.1 271 msGsdiFadgkaesr.dylg.....gvRkPPGGessia 302
                   Gs+ Fa+g +++  + l      +   PPGG+ssi+
  MMETSP1325-20131115|4068_1 110 TNGSNAFANGSNQNCgNVLTdrpttRLHAPPGGKSSIS 147
                 57********9965312222212137789*******96 PP

>> PF07577.6  Domain of Unknown Function (DUF1547)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00055       1.9      16      34 ..      16      34 ..       8      43 .. 0.82
   2 ?    4.1   0.0    0.0096        33      16      34 ..     112     130 ..     109     139 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00055
   PF07577.6 16 qqgngsteenqnLGdvikd 34
                +++ + +  nqn G+vi d
  MMETSP1325-20131115|4068_1 16 SSNAFANGSNQNCGNVITD 34
                567787888********98 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0096
   PF07577.6  16 qqgngsteenqnLGdvikd 34 
                 +++ + +  nqn G+v  d
  MMETSP1325-20131115|4068_1 112 GSNAFANGSNQNCGNVLTD 130
                 567888888******9876 PP

>> PF11776.3  Domain of unknown function (DUF3315)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0   0.00085       2.9      13      30 ..      30      47 ..      24      48 .. 0.89
   2 ?   -0.7   0.0      0.26     9e+02       6      17 ..      65      76 ..      60      76 .. 0.81
   3 ?    2.9   0.0     0.021        72      14      29 ..     127     142 ..     120     144 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00085
                GEE---TTSS-------- CS
   PF11776.3 13 yvvddwkryhLpaPprgy 30
                 v++d+   +L+aPp g+
  MMETSP1325-20131115|4068_1 30 NVITDRSTTRLHAPPGGQ 47
                59*************998 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.26
                GGGTSGGGEE-- CS
   PF11776.3  6 peyrgrryvvdd 17
                p+yr+ +  v++
  MMETSP1325-20131115|4068_1 65 PQYRQKENAVNQ 76
                899999999875 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.021
                 EE---TTSS------- CS
   PF11776.3  14 vvddwkryhLpaPprg 29 
                 v++d+   +L+aPp g
  MMETSP1325-20131115|4068_1 127 VLTDRPTTRLHAPPGG 142
                 78899999******98 PP

>> PF00835.14  SNAP-25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1     0.033   1.1e+02      12      32 ..      14      34 ..       9      49 .. 0.82
   2 ?    0.5   0.4      0.28   9.4e+02      18      34 ..      70      90 ..      56     114 .. 0.53
   3 ?    8.3   0.1     0.001       3.5      18      38 ..     116     136 ..     105     147 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.033
  PF00835.14 12 sqedkksawkaNddeGkvvss 32
                sq ++  a + N+++G+v+++
  MMETSP1325-20131115|4068_1 14 SQSSNAFANGSNQNCGNVITD 34
                56777778899999***9876 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.28
  PF00835.14 18 sawkaNdd....eGkvvssqP 34
                ++  +N+        v +++P
  MMETSP1325-20131115|4068_1 70 KENAVNQApvslAAAVAAKAP 90
                444444444444222333333 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.001
  PF00835.14  18 sawkaNddeGkvvssqPrsrv 38 
                  a + N+++G+v+++ P  r 
  MMETSP1325-20131115|4068_1 116 FANGSNQNCGNVLTDRPTTRL 136
                 46778999*********7765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 626.42
//
Query:       MMETSP1325-20131115|4067_1  [L=324]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-52  178.5   0.0    1.8e-52  178.1   0.0    1.1  1  PF00202.16 Aminotransferase class-III
    0.00065   18.6   0.0    0.00071   18.5   0.0    1.1  1  PF00155.16 Aminotransferase class I and II
  ------ inclusion threshold ------
      0.062   13.4   0.1        0.3   11.2   0.0    2.1  2  PF00586.19 AIR synthase related protein, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00202.16  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.1   0.0     4e-56   1.8e-52      75     315 ..       6     236 ..       2     247 .. 0.94

  Alignments for each domain:
  == domain 1    score: 178.1 bits;  conditional E-value: 4e-56
                 ---EEEEE----HHHHHHHHHHH...SS.HHCT--EEEEETTT-----HHCCCHT--TTTT-------TTEEEE-TT-TTC-BHHHHHHHHHHHHHHHHTCCCEEEEEE-SEE-----EE--CCCHHHHHHHHHHCT-EEEEE-S----------SGGGG-----SEEEE-CTC------EEEEE-HHHHTTSHH--.....-SSTT-HHHHHHHHHHHHHHHHTTHHHHHHH---TTTHHHHH CS
  PF00202.16  75 gldkvflansGseanetAlKlarayekkkgatektkiiafegafhGrtlgalsvtkskkykklfgpllpgveilpypdlkaaeeekalleeaerlikevkkeeiaAvivEPiqgegGvvvasegflaklreickkhnvllivDEvqtGfGrtGklfAaehagvepDlmtlaKaltgGlplsavlataevmqafqpgs...hgttfggnplacavalavlevieeeellenaqekgerlkkgLee 315
                 ++++v ++nsG+ea +  ++l+r        t+++k+i+f+g++hG+    l  ++ +++++l  p  pg++    +d+       a  + +e  ++ +k +++aA+i+EP+ g+ G+++++++fl++lr++++ +n ll++DEv+tGf r +   A +h+gv+pD++t++K+++gGlp+ a  +++++m++++p++   +++t +gnpla+ ++l++le++ +   +e++ ek erl +g++e
  MMETSP1325-20131115|4067_1   6 SVEMVRFTNSGTEACMGMIRLVR------AFTGREKVIKFNGCYHGHADSFLV-QAGSGVATLGLPDSPGTPAGATKDTLV-----AKYNDIESVKELMKGDDVAAIILEPVVGNSGFIPPTQEFLEELRKLADGKNTLLVFDEVMTGF-RISYGGAQAHFGVTPDVTTMGKVIGGGLPVGAYGGRKDIMEMVAPAGpmyQAGTLSGNPLAMTAGLKTLEILSRPGSYEQLTEKTERLINGILE 236
                 6789*******************......99*****************99997.99999****999999965555555555.....88999999*******************************************************.*******************************************9999999**************************************998764 PP

>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.6e-07   0.00071     130     358 ..      83     312 ..      12     316 .. 0.77

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 1.6e-07
                 E-HHHHHHHHTT--SS-E...EEE-SSS-S-------HHH.HHHHHHHHHHTT-EEEEEES-------.-HHHHHHHHHHH-S-EEEEE--CCCCTBGGG----EEEE-HHHHHHHHHCCTTTS.-----CCHHHHCTSHHHHHH...HHHHHHHHHHHHHHHHHHCC.CC-TCHHHH-.---EE-----HH...............HH.........HCCH---BE--........---EE-----TTTHHH CS
  PF00155.16 130 ldlealeealkeapegnkktkvvlvesphNPtGtvatlee.leklldlakkynlllfvDeaYagfvfgsldavatranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpfls.ssllqaavaaalsdallkqs...eleemrqrlqkrrkelrdeLaelglkvlasq.sgmflltdlsae.........takelskk.........LleevgvyvtpgtsftvpgrlRitvAglteeelee 358
                 +d+e+++e+ k +      +  +++e +  ++G +++ +e le+l +la+ +n ll++De+  gf     +a+a +++v +++      +++K  G  G+ vG+  g +++ + ++ +   +   + ++ +++++a  ++l++ s   + e+  ++ +++   + ++ +++g +v +   sgmf +  ++           +     +          +le+ gvy+ p ++f+    + +++ ++t+e++++
  MMETSP1325-20131115|4067_1  83 NDIESVKELMKGD-----DVAAIILEPVVGNSGFIPPTQEfLEELRKLADGKNTLLVFDEVMTGFRISYGGAQA-HFGVTPDVT-----TMGKVIG-GGLPVGAYGGRKDIMEMVAPAGPMYQAgTLSGNPLAMTAGLKTLEILSrpgSYEQLTEKTERLINGILEAGKAAGHDVCGGSiSGMFGFFFCEGPvtcfedaeaS-----DRekfgkwhraMLER-GVYLAP-SQFE---AGFMSL-AHTDEDIDH 312
                 5666666666653.....3689999*9******99876543999*********************988667766.999999755.....*****98.47788*999999999999988877777999999999999999998876555555555555555555555544447777666669999999888888888554442.....334555578889999.999999.7776...455777.777777776 PP

>> PF00586.19  AIR synthase related protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.39   1.8e+03      10      52 ..     108     163 ..      94     168 .. 0.60
   2 ?   11.2   0.0   6.5e-05       0.3      53      95 ..     199     249 ..     192     250 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.39
                 G..................-SEEE-BEEEEE--CCCHHT.-TTT---HHHHHHHHHHHC-- CS
  PF00586.19  10 g..................kdeelvvttdkvethnhptaidpydgaatavagnlrDiaamG 52 
                 +                  ++++++ + d v t+  +++     g+a+a  g   D+ +mG
  MMETSP1325-20131115|4067_1 108 NsgfipptqefleelrklaDGKNTLLVFDEVMTGFRISY-----GGAQAHFGVTPDVTTMG 163
                 044444445555555555566777777777777775443.....77777777777777776 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 6.5e-05
                 ----EEEEEEEE........TTTSBHHHHHHHH---HHHHHHCT-EE---- CS
  PF00586.19  53 Akplalldglal........snlldpealeeiveGladaanefgvplvgGd 95 
                 + pla+++gl +        s+++  e++e+ ++G+ +a++++g  + gG 
  MMETSP1325-20131115|4067_1 199 GNPLAMTAGLKTleilsrpgSYEQLTEKTERLINGILEAGKAAGHDVCGGS 249
                 789*******999999999977788899**********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1411.67
//
Query:       MMETSP1325-20131115|4070_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-10   39.3   0.6    2.6e-05   23.8   0.0    3.2  3  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   1.9e-09   2.6e-05       6      39 .]      15      48 ..      11      48 .. 0.94
   2 !   11.2   0.0   1.7e-05      0.24       8      39 .]      62     100 ..      59     100 .. 0.85
   3 ?    1.1   0.0     0.027   3.7e+02       1      11 [.     103     113 ..     103     114 .] 0.87

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 1.9e-09
                EEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  6 tlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                +lrgH ++V+++++ p+   l++g++D  +  Wd
  MMETSP1325-20131115|4070_1 15 ELRGHDGSVRSLCVVPSTGELVTGGSDAVVNRWD 48
                69*************************9999887 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 1.7e-05
                 ESSSSSEEEEEEESS.......STEEEEEETTSEEEEEE CS
  PF00400.27   8 rgHtspVtcvafspd.......gpllasgSrDgtirlWd 39 
                 r H ++V ++   p+          ++sg+ D+ +r+++
  MMETSP1325-20131115|4070_1  62 RDHDHSVLALLAMPPgilsdcpTGGFVSGCMDRYVRVYN 100
                 6788888888888888888888899************96 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.027
                 TEEEEEEESSS CS
  PF00400.27   1 geckatlrgHt 11 
                 g++++ ++gH+
  MMETSP1325-20131115|4070_1 103 GTPVRQFEGHE 113
                 6899******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 525.36
//
Query:       MMETSP1325-20131115|4069_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-45  155.3   0.9    1.4e-45  154.9   0.6    1.2  1  PF00689.16 Cation transporting ATPase, C-terminus


Domain annotation for each model (and alignments):
>> PF00689.16  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.9   0.6     1e-49   1.4e-45       1     182 []      76     250 ..      76     250 .. 0.93

  Alignments for each domain:
  == domain 1    score: 154.9 bits;  conditional E-value: 1e-49
  PF00689.16   1 plplsaiqiLwinLvtDslpalaLaleppekdimkrkPrkkkeplfskkmllriliqgllqalvtllafflgllgfgisekenklssnfaqtaaFitlvlsqifnalnlrsrkeslfkfsgif.snkllllavllslllqvlivyvpglnavfgtaplsleewlialllalvvllvdelrkll 182
                 p+pl+a+qiLwin+++D+ pa +L++ep ++++  r+Pr+k+ep+++  +++r+l  ++l++l tl++++  +   + + +      ++  t++F+t+v++ ++na ++rs ++++   s+ f sn+l+l+av +sl+ q+l++y+p++++vf+t+plsl +++ +++la+ +l++d +rk++
  MMETSP1325-20131115|4069_1  76 PNPLNAMQILWINIIMDGPPAQSLGVEPVDPRVAARPPRRKDEPIIDQLVMTRVLSSAMLIVLGTLWVYYREMT--DGEVT------RRDTTMTFTTFVMFDMMNAVACRSMDTPVYALSQGFlSNTLFLYAVGGSLVGQLLVIYWPPMQRVFQTEPLSLGDLIFIIGLASSMLVLDTVRKVF 250
                 79*******************************************************************77776..33333......348*********************9998777666666*********************************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 1236.69
//
Query:       MMETSP1325-20131115|4072_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-14   53.8   0.0    1.7e-14   53.2   0.0    1.3  1  PF09409.5  PUB domain
      0.003   17.2   0.3     0.0098   15.5   0.2    1.9  1  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
      0.085   13.3   0.3      0.085   13.3   0.2    1.9  2  PF12752.2  SUZ domain


Domain annotation for each model (and alignments):
>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   0.0   3.7e-18   1.7e-14       6      83 ..     143     219 ..     140     222 .. 0.89

  Alignments for each domain:
  == domain 1    score: 53.2 bits;  conditional E-value: 3.7e-18
   PF09409.5   6 fkkaleiLlkllkNIlknPneekyRrirlsNktfkekilsvegavelLellGFkeeeeeeflvlp.eqseesledlqka 83 
                  +++ ++L+ +l+ I  +P+e+k+Rr++lsNk ++++i  ++ a+ +Le++GF+ e    f+ l+ ++  + + +lq+a
  MMETSP1325-20131115|4072_1 143 ALECHDTLIAMLRQIQLDPQEPKWRRVKLSNKRVRRTIGRHPPAIAFLEAIGFEVE--GGFFHLKrDDPXSVVAGLQHA 219
                 5799****************************************************..88**99966666666666665 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   2.1e-06    0.0098       3      37 .]      65     101 ..      64     101 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHH----HH..HHHHHHHHTTTSHHHHHHHH CS
  PF00627.26   3 eeaiqqLreMGfsre..eakkALratnnnvErAveyL 37 
                 +++++ +++MG + +  ++ + L+ +++++ErA+ +L
  MMETSP1325-20131115|4072_1  65 DASVELILAMGLGHNasAVARSLELAGGDMERAIAWL 101
                 57899999998888776889****************9 PP

>> PF12752.2  SUZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.72   3.3e+03      16      18 ..      47      49 ..      22      69 .. 0.56
   2 ?   13.3   0.2   1.9e-05     0.085      23      54 ..     108     139 ..      90     139 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.72
   PF12752.2 16 ses 18
                 e+
  MMETSP1325-20131115|4072_1 47 AEG 49
                222 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 1.9e-05
   PF12752.2  23 sgssagakgakdrkaksleEReaeYqeAReRI 54 
                  + + ++++++ +++ s+eER a+Y +A  RI
  MMETSP1325-20131115|4072_1 108 ATRAVAQEQEQLSPNASREERIAHYGKAISRI 139
                 55666777888899**************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.41s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 1056.17
//
Query:       MMETSP1325-20131115|4073_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 554.16
//
Query:       MMETSP1325-20131115|4074_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-18   66.3   6.3    1.5e-18   65.9   4.4    1.2  1  PF06220.7 U1 zinc finger
    0.00059   19.7   3.1     0.0011   18.8   2.1    1.5  1  PF12171.3 Zinc-finger double-stranded RNA-binding


Domain annotation for each model (and alignments):
>> PF06220.7  U1 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   4.4   2.1e-22   1.5e-18       1      38 []      32      69 ..      32      69 .. 0.99

  Alignments for each domain:
  == domain 1    score: 65.9 bits;  conditional E-value: 2.1e-22
                --S-B-TTT--B-S--SHHHHHHHT---HHHHHHHHHT CS
   PF06220.7  1 mpkYyCdYCdiyLthDspsvRksHngGrkHkenvkdyy 38
                mp+YyCdYCd+yLthDs  +Rk+H +G kH envk+yy
  MMETSP1325-20131115|4074_1 32 MPRYYCDYCDTYLTHDSAPGRKQHMRGWKHRENVKQYY 69
                9************************************9 PP

>> PF12171.3  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   2.1   1.6e-07    0.0011       1      27 []      34      62 ..      34      62 .. 0.94

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 1.6e-07
                --B-TTT--B-SSHHHH..HHHTT-HHHH CS
   PF12171.3  1 qfYCvaCdkyFksenql..knHlksKkHK 27
                ++YC++Cd y++++++   k+H+++ kH+
  MMETSP1325-20131115|4074_1 34 RYYCDYCDTYLTHDSAPgrKQHMRGWKHR 62
                69**************999******8886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 777.59
//
Query:       MMETSP1325-20131115|4075_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.57
# Mc/sec: 586.69
//
Query:       MMETSP1325-20131115|4076_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|4077_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.14   11.5   0.0    1.2  1  PF08521.5  Two-component sensor kinase N-terminal
       0.27   11.5   2.0        0.3   11.4   1.4    1.2  1  PF04774.10 Hyaluronan / mRNA binding family


Domain annotation for each model (and alignments):
>> PF08521.5  Two-component sensor kinase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     2e-05      0.14      67     106 ..      42      82 ..      36     101 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2e-05
   PF08521.5  67 vfYrVldadgelltGyadlplpppsaaea.eprfydaeyrg 106
                  +Y+V ++ ge++ G+  lp  p++ + + +p  +++++ +
  MMETSP1325-20131115|4077_1  42 NYYEVDEETGEVINGEGPLPDKPEEPEPTpTPGEAEKKVAD 82 
                 69******************999666554455555544544 PP

>> PF04774.10  Hyaluronan / mRNA binding family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.4   4.4e-05       0.3      16      79 ..      31      92 ..       8     104 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.4e-05
  PF04774.10 16 neekreGaGrgNWGsvkdelaelkeeaaeeeekeeseEkqseeeeenkekeveeeeeveeedke 79
                ++ + e++++gN  +v++e  e+ + +++ ++k e+ E++++++e++k+ ++e +e v+  + +
  MMETSP1325-20131115|4077_1 31 HKTRIEKNAAGNYYEVDEETGEVINGEGPLPDKPEEPEPTPTPGEAEKKVADEAAEAVK--EAT 92
                667789999******************************99988887776666666222..223 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.63
# Mc/sec: 403.20
//
Query:       MMETSP1325-20131115|4071_1  [L=875]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.4e-125  419.4   0.1     1e-112  376.9   0.0    2.3  2  PF00012.15 Hsp70 protein
    4.4e-06   25.4   0.4    1.6e-05   23.6   0.0    1.9  2  PF06723.8  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  376.9   0.0  1.5e-116    1e-112       1     411 [.      11     433 ..      11     442 .. 0.96
   2 !   40.2   0.0   1.4e-14   9.4e-11     419     599 ..     467     706 ..     446     709 .. 0.85

  Alignments for each domain:
  == domain 1    score: 376.9 bits;  conditional E-value: 1.5e-116
                 EEXEEXXXXEEBXEEEXXXXEEEXXXTTXXSSEESEEEEXXXSEEXXXCCCTTTTTTGGGEEEXGGGTXXXBTTSTTHHHHHHHXSSEEEEE.TTTEEEEEEEXX..EEEEXHHHHHHHHHHHHHHHHHHHHSS.XXEEEEEEXTTXXHHHHHHHHHHHHHXXXEEEEEEEHHHHHHHHXXXTTSX........XEEEEEEEEXXXXEEEEEEEEEXXEEEEEEEEEETTXXXXHHHHHHHHHHHHHHHHHSS.XGGGSHHHHHHHHHHHHHHHHHTTCSSCSEEEEEEEEEETXTEEEEEEEEHHHHHHHCHHHHCTTTHHHHHHHHHCTXXCCCESEEEEEXXETTSHHHHHHHHHHTXXX.......EEXSSXTTTTTTXXXTTCHHHCSSSSXXXXXXECEEESS-E-EEEEE--EEEEEST CS
  PF00012.15   1 viGiDLGttnsvvavmeggkvevianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvkrliGrkfsdpevqkeikhlpykvvkk.engkavvevealgekkkftpeeisamvLkklketaeaylgekvtdavitvPaYFndaqRqatkdAgkiAGLnvlRivneptaaalaYGldkkd.......kernvlvfDlGggtfdvSileiedGvfevkatagDthlGGedfDealvehlveefkkkegidlskdkkalqrLreaaekaKkeLSsssqteinleietldedgkdlsekltRakfeeLvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfgke.......psksvnpDeavAiGaAvqaavlsgeeevkdllllDvtpLslgietlggvmtklier 411
                 viGiD G+ n+v+a +  g+v+v+ n  ++r     v+F+ ker +G++A+  a +n +nt +++krliGrkfs++evq+ei ++ +  v+  ++g ++++v++++e+   t e+  am+L+k   +aea  g+kv dav++vP Y+ daqRq++  A +iAGLn+lR++ e ta ala+G+ k+        ke nv+++DlG+++f+ S ++++ G++ vk+ a+D  lGG+ fDe++++++++efk k+g+d+  ++ka  +L  aaekaKk+LS +  te+++++e+l+e + d++ klt +++ e++e+ll+r + p+++al+ ++l+  ++++v++vGGstR+  v+  +++l++ +       +s+++n+De v +G+A+qaa+ls  ++vk++ +   +   + i+++++ +++++e+
  MMETSP1325-20131115|4071_1  11 VIGIDFGNLNCVIAQAGRGGVDVLLNGASKRQNACAVSFQGKERFMGDDAQAIARSNYRNTPINMKRLIGRKFSEQEVQDEIAEMGVACVEMpDTGYVGMKVSYNDEEVMVTMEQACAMMLTKCMGIAEASAGAKVMDAVVSVPGYWSDAQRQSMIHACNIAGLNCLRLMHENTATALAFGIFKSAkglfdaeKETNVMFLDLGHASFTASCVSFQTGKLAVKSAAYDRSLGGRAFDECIAKYIASEFKAKHGLDAWASPKARMKLFAAAEKAKKTLSPKGVTEAPINVECLME-DLDFNCKLTLEQLMEMAEPLLARLEGPIREALETSGLSPADLSSVEIVGGSTRLEFVKARMSQLLELDatainmgLSTTMNADESVCRGCALQAAMLSTRFKVKEFNIYEAVT--YPIKLSWDPVDQMVED 433
                 79***********************************************************************************99877761568899*************************************************************************************9999****9*****************************************************************************************************.***********************************************************999987543122222279*******************************99887..********99888765 PP

  == domain 2    score: 40.2 bits;  conditional E-value: 1.4e-14
                 EE.EEEEESCCCES.SEEEEEEES-GSSGGGS....EEEEEEEEE---S-------EEEEEEE-----EEEEEEESE---EEEEEE-TT----HHHHHH.................................................HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC.GGGSSHHHH...HHHHHHHHHHHHHHT.----HHHHHHHHHHHHHCHHHHHHH CS
  PF00012.15 419 ks.qvfstaadnqt.aveievlqgerelakdn....kllgkfeltgippaprGvpqieVtfdidanGiltvsakdkstgkeekitieaseglsedeiek.................................................mvkeaeesaeedkkkkeaieakneleelvyslekkleee.kekvseaek...ekkveeaieelkeel.egedkeeieakleelekvvekivek 599
                 +s ++   +++++  ++++ + + + ++ +        +gkf++t   p+ + vp+i+V++  d +Gil+ +++++ ++++e+ + e + +++ed  +                                                   + e+ +++++d    e+  akn++e+++y +++k+ ++ +  +++aek   e+++++a+++l+     +  k+ +e+kl++l+++ ++i ++
  MMETSP1325-20131115|4071_1 467 EStPIIRRVTFKRRePFTVTATYDDAAMGALPpgtdPVIGKFTVTPT-PKDEAVPKIRVNIMHDLHGILKCNSAQMMEEIKEEPKDEPKAEATEDGKAGdgkegdaaspsadgkeaeaeepprkkryrkvplavdwptpglnagalqsCIDEEAKMQKQDLLILETNSAKNDVETYIYAMRDKVIDSlRPYCTDAEKeafEAALTAAEDWLYYGDgYDTTKDVYENKLQSLKAMGSPIERR 706
                 44566666777666689999999998887655456689*****9985.59999***********************999999988888888777766667899*********************************************999********************************9999888888888878889999999999876414445**************9999876 PP

>> PF06723.8  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1     0.083   5.7e+02       3      23 ..      11      31 ..       9      40 .. 0.87
   2 !   23.6   0.0   2.3e-09   1.6e-05      71     315 ..     123     394 ..     116     404 .. 0.72

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.083
                EE--B----EEEE-------- CS
   PF06723.8  3 dlgiDLGtantlvyvkgkgiv 23
                 +giD G  n ++ + g+g v
  MMETSP1325-20131115|4071_1 11 VIGIDFGNLNCVIAQAGRGGV 31
                59**************99955 PP

  == domain 2    score: 23.6 bits;  conditional E-value: 2.3e-09
                 HHHH.HHHHHHHHHHH-----SS--EEEE-------HHHHHHHHH--------EEEE--HHHHHH-----........-TTS----EEEE-----EEEEEE--..--EEEEEEE...S----HHHHHHHHHHHHHHSB----HHHH..HHHHH----S--HHHH.......-EEE---BTT------EEE----HHHHHHHHHHHHHHHHHHHHHTS...-HHHHHHHHH---EEE---------HHHHHHH-----.......EE-SSTTTTTT--- CS
   PF06723.8  71 leva.eellkyfikkvkkkkslskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGagl........pveepsgnmvvdiGggttevavisl..ggivtsksv...rvaGdeldeaiikyirkkynlliGertae..kikieigsavkeeeee.......kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLekt...ppeLaadivdrgivltGGgallkgldkllseetglpv.......kvaedpltcvakGt 315
                 +e+a + +l + +  ++ +   +    v++vP   ++ +r+ +++a++ aG +   l+ e  a A+  g+        + e+ +  m +d+G  +   + +s+  g + ++++     ++G ++de i kyi ++++   G       k ++++ +a+++++++       +  i+  +l++ l  +++++ e++ e+ +  ++++   ++e+Le+    p    ad+   ++ ++GG++ l+ ++  +s+ ++l         +++ ++ ++v++G+
  MMETSP1325-20131115|4071_1 123 MEQAcAMMLTKCMGIAEASAGAKVMDAVVSVPGYWSDAQRQSMIHACNIAGLNCLRLMHENTATALAFGIfksakglfDAEKETNVMFLDLGHASFTASCVSFqtGKLAVKSAAydrSLGGRAFDECIAKYIASEFKAKHGLDAWAspKARMKLFAAAEKAKKTlspkgvtEAPINVECLMEDLDFNCKLTLEQLMEMAEPLLARLEGPIREALETSglsP----ADLS--SVEIVGGSTRLEFVKARMSQLLELDAtainmglSTTMNADESVCRGC 394
                 54441567788888888888899999**************************************9988754444444578889999******988777777762144444333223369*****************999997765401555555555544444345556667789999************************************9752224....4543..46667888888877777776655544000000044555555666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (875 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.28u 0.34s 00:00:01.62 Elapsed: 00:00:00.66
# Mc/sec: 3176.99
//
Query:       MMETSP1325-20131115|4078_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 821.61
//
Query:       MMETSP1325-20131115|4079_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-19   69.5   0.0    7.7e-12   45.4   0.0    2.1  2  PF01590.21 GAF domain
    1.5e-11   44.3   0.0    2.9e-07   30.5   0.0    2.1  2  PF13492.1  GAF domain
    9.9e-10   38.9   0.0    2.2e-07   31.3   0.0    2.1  2  PF13185.1  GAF domain
  ------ inclusion threshold ------
      0.018   14.0   0.0      0.024   13.6   0.0    1.2  1  PF04357.8  Family of unknown function (DUF490)


Domain annotation for each model (and alignments):
>> PF01590.21  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   2.3e-15   7.7e-12      64     154 .]       2      78 ..       1      78 [. 0.93
   2 !   22.3   0.0     3e-08    0.0001      11      81 ..     119     183 .]     111     183 .] 0.84

  Alignments for each domain:
  == domain 1    score: 45.4 bits;  conditional E-value: 2.3e-15
                 TCTSTEEESSCGGSTTTECHHCTHHCTB--THHHHHHHHH-T-SEEEEEE-.BETTEBEEEEEEEESS-.----HHHHHHHHHHHHHHHHHH CS
  PF01590.21  64 atgrpvvipdvqddprfqdqtlagselrapsgchehymrrlgvrsllavPl.largkliGvlvlhnkspgrpftdddlellealaaqaaval 154
                 ++ ++v+ipd+++d+rf +  +  +              ++ + s+l+ P+ +  g+++Gv++++nk +  pft+dd+e    laaqa++al
  MMETSP1325-20131115|4079_1   2 QDDESVNIPDAYADDRFDPSHDKKT--------------GYKTDSILCQPIqDTSGEIVGVMQVINKAD-GPFTQDDEEVSHILAAQAGIAL 78 
                 67899*************9999998..............99*********6366699************.********************97 PP

  == domain 2    score: 22.3 bits;  conditional E-value: 3e-08
                 HHHHHHCTECEEEEEEEETTTEEEEEEEEEEGHHSHHHHHEECHCCCCCEECCTCTSTEEESSCGGSTTTE CS
  PF01590.21  11 relrellgadrcavalpdldglelylvlgyplsdipqaelslppaggiageviatgrpvvipdvqddprfq 81 
                 + +  + +adrc+v+++d+    l        s + + +++l+   +iag v+++g++++ipd+++d+rf+
  MMETSP1325-20131115|4079_1 119 TKAPLIVDADRCTVFVVDEKQNQL-----VSTSGEVNIRIDLSK-PTIAGSVATSGEIINIPDAYSDDRFN 183
                 55556789***************9.....666666666778888.999*********************96 PP

>> PF13492.1  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   8.5e-11   2.9e-07      68     129 .]      18      80 ..       3      80 .. 0.89
   2 !   12.0   0.0   4.4e-05      0.15       8      72 ..     116     176 ..     110     181 .. 0.74

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 8.5e-11
   PF13492.1  68 svpsldnreglpsesllvvPLvage.eviGvlvlgsvpeeafteedlellellasqiavalen 129
                 ++ps d+++g +++s+l+ P+ +++ e++Gv+ +  + ++ ft++d e+  +la+q+++al+n
  MMETSP1325-20131115|4079_1  18 FDPSHDKKTGYKTDSILCQPIQDTSgEIVGVMQVINKADGPFTQDDEEVSHILAAQAGIALKN 80 
                 45777888999**********************97778899********************98 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 4.4e-05
   PF13492.1   8 rilellaeilgaeraalylldedgnelrlvagiggdprlseslp.edeplvrrvletgeplsvpsl 72 
                 ++   +  i +a+r++++++de +n  +lv+ + g+  ++ +++    ++++ v+ +ge+++ p++
  MMETSP1325-20131115|4079_1 116 TMTTKAPLIVDADRCTVFVVDEKQN--QLVSTS-GE--VNIRIDlSKPTIAGSVATSGEIINIPDA 176
                 5555666689***********9999..556666.33..3348886677788899999999999885 PP

>> PF13185.1  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   6.5e-11   2.2e-07      85     147 ..      15      78 ..       2      79 .. 0.83
   2 !    5.8   0.0    0.0046        16      19      83 ..     125     174 ..     114     182 .. 0.58

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 6.5e-11
                 .........HHHH----EEEEE---.---.----EEEEES------HHHHHHHHHH---HHHHH CS
   PF13185.1  85 edrsglpgdparhegirsllavPlv.aggrviGvlalaskepdafteedlelLellaeqiaial 147
                 +dr ++ +d    +++ s+l+ P+    g+++Gv+++ +k +++ft++d e+   la+q++ial
  MMETSP1325-20131115|4079_1  15 DDRFDPSHDKKTGYKTDSILCQPIQdTSGEIVGVMQVINKADGPFTQDDEEVSHILAAQAGIAL 78 
                 344444478888999**********5555**********************************9 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0046
                 SS-SEEEEEEE----.-EEEEEEE-----------B---TTS----HHH-EEES-G.GG-S-HHHHH CS
   PF13185.1  19 tgadagaiylvdedg.qllevaasgeegedlragaalsvdlegplglalvglgegl.lrtgkpvivn 83 
                  +ad +++++vde++ ql++++   +       +++ls            + ++g+ + +g+++ + 
  MMETSP1325-20131115|4079_1 125 VDADRCTVFVVDEKQnQLVSTSGEVNI------RIDLS-----------KPTIAGSvATSGEIINIP 174
                 459********9998554444443322......22222...........222333335555555555 PP

>> PF04357.8  Family of unknown function (DUF490)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   6.9e-06     0.024      28      81 ..     120     176 ..     104     181 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 6.9e-06
   PF04357.8  28 eldLtlsldnlqllnpkdyr...gtvsgdltltgsleapvlsGeltvsrgtielpea 81 
                 +++L + +d+ +++  ++ +   +  sg+++++ +l++p++ G + +s   i++p+a
  MMETSP1325-20131115|4079_1 120 KAPLIVDADRCTVFVVDEKQnqlVSTSGEVNIRIDLSKPTIAGSVATSGEIINIPDA 176
                 57888888887777777766664448*************************999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 877.07
//
Query:       MMETSP1325-20131115|4081_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       892  (0.0652428); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 1055.24
//
Query:       MMETSP1325-20131115|4084_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-08   32.5   0.0    7.2e-08   32.3   0.0    1.1  1  PF00307.26 Calponin homology (CH) domain
  ------ inclusion threshold ------
       0.12   11.9   0.0       0.14   11.7   0.0    1.3  1  PF11971.3  CAMSAP CH domain


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   1.1e-11   7.2e-08       5      75 ..      19      81 ..      15      82 .] 0.81

  Alignments for each domain:
  == domain 1    score: 32.3 bits;  conditional E-value: 1.1e-11
                HHHHHHHHTTSTCTSSHS.HHHHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHH CS
  PF00307.26  5 lrWinkvlekleqsrqve.nlskdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaee 75
                 +W+  v+e        e  +++ l+DG++L++ll+k++p+  ++++i  + ++++  ++eN +++++ ++e
  MMETSP1325-20131115|4084_1 19 QEWVSTVMETP-----WEgTFEEYLKDGQVLCNLLNKIQPG--AVKKI--STSKMALMQMENHSKFVKKIQE 81
                57888888755.....23378999*****************..68999..44458999******99998876 PP

>> PF11971.3  CAMSAP CH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     2e-05      0.14      17      44 ..      35      60 ..      19      81 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2e-05
   PF11971.3 17 trdlsDGvaLaalihfYcPklvpledic 44
                 + l+DG++L+ l++   P +v+   i+
  MMETSP1325-20131115|4084_1 35 EEYLKDGQVLCNLLNKIQPGAVKK--IS 60
                55689**************99964..55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 370.76
//
Query:       MMETSP1325-20131115|4085_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0068   15.6   0.0      0.016   14.4   0.0    1.5  1  PF05990.7 Alpha/beta hydrolase of unknown function (DUF900)
  ------ inclusion threshold ------
      0.019   14.4   0.5      0.031   13.7   0.3    1.3  1  PF06821.8 Serine hydrolase
      0.033   13.3   3.0      0.028   13.5   0.5    1.8  2  PF10503.4 Esterase PHB depolymerase


Domain annotation for each model (and alignments):
>> PF05990.7  Alpha/beta hydrolase of unknown function (DUF900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   3.5e-06     0.016      63     187 ..      71     188 ..      63     204 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 3.5e-06
   PF05990.7  63 lldynyDresaeasrdalekllrylatkksakkihllaHSmGtwlvlealrqlaieadepaleakikeviLaApD.idvdvfkkqleslgkeskeltvyvsrdDraLklS.aliegdasRlGaldpd 187
                 +l y+  + +a+  ++ l+++lr l+++++ + + ++aHS     v+ a  +l    +        +e+ L Ap  +++dv+ +  +  g  ++  +vy s+ D +L+   ++ +++ + +Ga++++
  MMETSP1325-20131115|4085_1  71 MLQYKFAERTARRDAATLAQALRSLREEHQYDYVRVVAHSLACAKVIAASASLPSALR-------PDELHLCAPAcVEADVAVELAS--GVAREATHVYFSEWDYVLACGfRAAHHGHPAIGAVGVS 188
                 577888899999999*************************877766666666655444.......4788888886378888877655..44555678999999999985424555566666666655 PP

>> PF06821.8  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   6.8e-06     0.031      43      93 ..      85     141 ..      62     162 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 6.8e-06
                 HHHHHGGGGG--TT.....EEEEEE----HHHHHHHH.---SS-E--EEEE----.. CS
   PF06821.8  43 vaeleaavaaaeek.....vvlvAHSlgclavlhaae.lqsrakvagalLVApadve 93 
                 +a+l++a++ ++e+     v +vAHSl+c+ v++a + l s+ + ++  L Apa ve
  MMETSP1325-20131115|4085_1  85 AATLAQALRSLREEhqydyVRVVAHSLACAKVIAASAsLPSALRPDELHLCAPACVE 141
                 677778887777777777899*********999987544555556678888888775 PP

>> PF10503.4  Esterase PHB depolymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.5   6.2e-06     0.028      51     121 ..      58     131 ..      44     157 .. 0.73
   2 ?   -1.4   0.1      0.22   9.9e+02     143     170 ..     215     242 ..     140     264 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.2e-06
   PF10503.4  51 ypeqslranaqkcwnwykdtdraGrGeadvvaalvdalvdehrvdaarvyvaGlsaG...aaladllalhypdv 121
                 y       na +    yk  +r+ r +a+++a   ++l +eh++d  rv    l+     aa a+l +   pd 
  MMETSP1325-20131115|4085_1  58 YVTADVTLNALRLMLQYKFAERTARRDAATLAQALRSLREEHQYDYVRVVAHSLACAkviAASASLPSALRPDE 131
                 55555556666667779999*****************************9888876611234445555555554 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.22
   PF10503.4 143 ldvmrrGlrqapavavdalvdagaypgl 170
                 +  m  G  + p + v   +d g+ p l
  MMETSP1325-20131115|4085_1 215 FANMAYGRPPRPNTKVSEGSDGGVVPQL 242
                 3345566666666666666777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.38s 00:00:01.05 Elapsed: 00:00:00.54
# Mc/sec: 1513.26
//
Query:       MMETSP1325-20131115|4086_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.001   18.6   0.1        1.4    9.1   0.0    2.3  2  PF00560.28 Leucine Rich Repeat
     0.0022   17.4   0.1       0.62    9.6   0.0    2.1  2  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
       0.02   14.7   5.8      0.035   13.9   4.0    1.4  1  PF08263.7  Leucine rich repeat N-terminal domain
      0.068   12.8   0.3       0.16   11.6   0.2    1.6  1  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0004       1.4       3      21 ..      35      54 ..      33      55 .. 0.87
   2 !    7.6   0.0    0.0013       4.3       4      19 ..      60      77 ..      59      79 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0004
                SEEEETSSBCB.CHHHHHHH CS
  PF00560.28  3 eeLdLsgNnlt.slppslsn 21
                +++ Ls+Nnl+ ++p +l +
  MMETSP1325-20131115|4086_1 35 RYILLSSNNLKgTIPTELAA 54
                7899***********98776 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0013
                EEEETSSBCB.CHHHH.H CS
  PF00560.28  4 eLdLsgNnlt.slpps.l 19
                +++L++N+++ s+p + +
  MMETSP1325-20131115|4086_1 60 VIHLNYNSISgSIPTEfF 77
                589***********9955 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0    0.0024       8.2       5      24 ..      36      56 ..      35      57 .. 0.83
   2 !    9.6   0.0   0.00018      0.62       6      26 ..      61      82 ..      59      83 .. 0.92

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0024
   PF12799.2  5 vLdLsnNnIk.dlppelanLp 24
                ++ Ls+Nn+k  +p ela L+
  MMETSP1325-20131115|4086_1 36 YILLSSNNLKgTIPTELAALT 56
                6679******77999999887 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00018
   PF12799.2  6 LdLsnNnIk.dlppelanLpnL 26
                + L++N+I+ ++p e+ +++nL
  MMETSP1325-20131115|4086_1 61 IHLNYNSISgSIPTEFFSMTNL 82
                68*******99**********9 PP

>> PF08263.7  Leucine rich repeat N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   4.0     1e-05     0.035      26      43 .]       6      27 ..       4      27 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1e-05
   PF08263.7 26 Wnpss..dsdpCs..WtGVtCd 43
                W  s+  +sdpCs  W G+tC+
  MMETSP1325-20131115|4086_1  6 WGGSAdsSSDPCSdgWYGITCS 27
                555556679************7 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   4.6e-05      0.16       5      51 ..      36      82 ..      35      84 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.6e-05
   PF13855.1  5 eLdLsnNrlk.vipdgaFkglsnLkvLdLsgnnlk.sispeafkgLpsL 51
                ++ Ls+N+lk +ip++    l+   v+ L++n+++ si++e f ++++L
  MMETSP1325-20131115|4086_1 36 YILLSSNNLKgTIPTELAA-LTDTYVIHLNYNSISgSIPTEFF-SMTNL 82
                7889999999667776655.99999*********637766554.45555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 403.60
//
Query:       MMETSP1325-20131115|4082_1  [L=423]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-29  101.6   0.0    5.2e-29  101.0   0.0    1.2  1  PF00266.14 Aminotransferase class-V


Domain annotation for each model (and alignments):
>> PF00266.14  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.0   0.0   3.8e-33   5.2e-29      45     293 ..      76     337 ..      44     365 .. 0.83

  Alignments for each domain:
  == domain 1    score: 101.0 bits;  conditional E-value: 3.8e-33
                 HHHHHHHHHHHTT-S-GGGEE---------HHHHHH---------EEEEETT--GGGTHHHHHHHHH---EEEEE-B-----B-.GGGHHHH-...........-TTEEEEEEESB-S----B--HHHHHHHHHH---EEEEE---STTTS---HHHHT-SEEE-----.---------EEE-HHHHHH---------.-EEE--S.---EE--TTGGG-.--------------HHHHHHH---HHHHHHHHHHHHHHHHHHTT CS
  PF00266.14  45 leearekvaelinaeseeeiiFtsgttealnlvalslarslkagdeilvteaehhanlvpwqelakrtgakvkvipvdeegsld.ldelekll...........tpktklvaithvsnvtGvvqpveeiaklakeagalvvvDaaqavghipidvkklgvDflafSgHK.llgPtGiGvlyvrrellekleplklgge.mveevsl.eettfaeapskfe.aGTpniagiiglgaaleyleeigleaiekhekelaeylyerLsa 293
                 +++ar++va++i+a+s e+++F+ +++e++n++++sl   ++  +++l+ ++ +     + + l+++ g+++  ++ ++    + + ++++ l           +  t++ +++h+ +v  v+ p++e+a+ +k+aga+vv D+a  +g+i +dv  lgvD++++ gHK l+ P+G  +l+v+++ ++   p    g+ +   v+  e+ + ++    f  +GT++  ++++++aa+++ +++g +a+ ++ + la    e L +
  MMETSP1325-20131115|4082_1  76 IDQARQDVAAYIGADS-EDVVFVDNASEGMNALLKSL--VVDGSTTVLYLDMAYFMVAETLRFLRDTVGVELIEVKTEDLLPTTsTRDFNTELvrrvtealassDRPTAVCSFSHITSVPAVILPLAELAAACKAAGAVVVGDGAHVMGQIMVDVPSLGVDVYVSNGHKwLFSPKGSAFLWVSKQYQGTESPYAADGSaVYPLVTSfEGQGESDFAKLFSyEGTKDYGAFLSFSAAIDWRSQLGEAAVIDYIHDLAVSGAELLVS 337
                 789************9.********************..689999*************99****99999998766665554444533443333344444447645779999**************************************************************************9999988776555145566655999988888777778*******************************999777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.43s 00:00:01.19 Elapsed: 00:00:00.60
# Mc/sec: 1689.43
//
Query:       MMETSP1325-20131115|4087_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0019   17.4   0.4        1.3    8.2   0.0    2.2  2  PF03357.16 Snf7
  ------ inclusion threshold ------
      0.052   13.6   3.0       0.13   12.3   0.1    2.2  2  PF05008.10 Vesicle transport v-SNARE protein N-terminus
      0.082   12.8   3.7       0.14   12.0   0.2    2.1  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain


Domain annotation for each model (and alignments):
>> PF03357.16  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00047       2.1     106     134 ..       7      35 ..       3      52 .. 0.86
   2 !    8.2   0.0   0.00028       1.3      39      72 ..      74     107 ..      63     113 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00047
  PF03357.16 106 idklmdeiedqmekadeisealsrsldda 134
                 ++  m ++++q  ++dei+e l r+ +d+
  MMETSP1325-20131115|4087_1   7 VRAKMAKLKEQKRVSDEINELLTRPGEDG 35 
                 666799******************98876 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00028
  PF03357.16  39 nkdrAlllLkqkkryekqldqldgqlanleqval 72 
                 ++  ++ l k++ r+ ++++qld+ ++n+e+++ 
  MMETSP1325-20131115|4087_1  74 KNGDVQHLVKKLNRIGNEIAQLDAESQNIEAMRK 107
                 567789999**********************986 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.3     0.078   3.5e+02      22      42 ..       9      29 ..       2      30 .. 0.73
   2 ?   12.3   0.1   2.9e-05      0.13      21      59 ..      70     109 ..      62     111 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.078
  PF05008.10 22 erkaalreiekkldeaeellk 42
                 + a+l+e ++  de++ell 
  MMETSP1325-20131115|4087_1  9 AKMAKLKEQKRVSDEINELLT 29
                677888888888888888885 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 2.9e-05
  PF05008.10  21 e..erkaalreiekkldeaeellkqMelEvrnlpsseraky 59 
                 e  +++  ++++ kkl+ + + + q++ E +n+  + r+++
  MMETSP1325-20131115|4087_1  70 EaiQKNGDVQHLVKKLNRIGNEIAQLDAESQNIE-AMRKPL 109
                 3449*****************************8.888776 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2     0.051   2.3e+02      50      64 ..      15      29 ..       2      49 .. 0.58
   2 ?   12.0   0.2   3.1e-05      0.14      59      95 ..      69     104 ..      64     110 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.051
                HHHHHHHHHGGGTTT CS
  PF02403.17 50 aerNelskeIgkakk 64
                +e++++s eI ++  
  MMETSP1325-20131115|4087_1 15 KEQKRVSDEINELLT 29
                344455666555554 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 3.1e-05
                 GGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  59 Igkakkkkedaeeliaevkelkeelkaleaelkelea 95 
                 ++ + k++ d+++l+++ + +++e+++l+ae +++ea
  MMETSP1325-20131115|4087_1  69 VEAIQKNG-DVQHLVKKLNRIGNEIAQLDAESQNIEA 104
                 55556655.***********************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       547  (0.0400088); expected 273.4 (0.02)
Passed bias filter:                      473  (0.0345963); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.48
# Mc/sec: 903.63
//
Query:       MMETSP1325-20131115|4080_1  [L=287]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 1322.60
//
Query:       MMETSP1325-20131115|4083_1  [L=442]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-14   53.0  47.3    3.9e-07   29.0  15.3    2.3  2  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6  13.2   3.8e-11   5.2e-07      27     230 ..      58     271 ..      22     287 .. 0.75
   2 !   29.0  15.3   2.9e-11   3.9e-07      30     180 ..     288     436 ..     270     442 .] 0.81

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 3.8e-11
  PF07690.11  27 lgispseigwlltlyslgyaiasllaGrlsdrfGrrrvlllglllfalglllll.fasslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslg.WravFlilailsllaavlvllllprepperkrkspaeel.....rkepaplvp..............awklllkppvlwillialllfffvfsglltll 230
                  g++p++i+ l ++ +++  +++++++ +  +fG+r + llg +l++lg ++l  + + l  ++l   +++G+g+g+ +++ + +   wfpk  +g+ +gl+  gf+ Ga +   ++  la+s+  +  +   la++++ + +l+ ll+ ++pp + r+++  e             ++               +k+ ++++ +  ll+++ l+  +f+  +t +
  MMETSP1325-20131115|4083_1  58 PGMTPDAIQVLPMA-LVAVNLGMPIGACMNKKFGPRITTLLGCALMVLG-TFLGsYQTRLLPFMLYYSLMAGVGTGMSYSTPMIAGWSWFPK-SKGLINGLILFGFGSGAFVFNNVATGLAQSGVlFGEMLRKLALMYAAGSLLGSLLIKAKPPVTVREAENCEIgdtatP-----PANmpvspdpvcdepgaTFKQAVTSRRFS-LLWVIGLM--AFTPGITVM 271
                 45778888876655.56789999999***********************.555547788888******************************.*****************9999999999944446666777778888888888889999999999999999996444442.....22255556778889999999999999883.33333333..222222333 PP

  == domain 2    score: 29.0 bits;  conditional E-value: 2.9e-11
  PF07690.11  30 spseigwlltlyslgyaiasllaGrlsdrfGrrrvlllglllfalglllll.fasslwalllvlrvlqGlga.galfpagaaliadwfpkeergralgllsagfslGailgpllggllasslgWravFlilailsllaavlvllllprepper 180
                 + ++++++ ++ +++++++ +++G ++d++G  r + ++ ++ ++  +lll fa+ +  + +++ v  +l++ g+ +++ ++  a++f   + g  ++ll ++ +l++++g+ l   ++  +gW+++F +la ++ll + +  l l+++++ +
  MMETSP1325-20131115|4083_1 288 DDQFLSLVGGIGAVFSGLGKMIWGIVVDKIGFLRGYQITTVAQIAL-MLLLpFAAVSK-VAFAAAVCGALFClGGSIAMYVTCNAQTFGVANAGEIYSLLFSSLALSSVVGAKLTIGMLGTVGWHGIFTVLACMGLLNFGM--LKLFQRETRT 436
                 55779*****************************999999999999.44444854444.5566666666666599999999999******************************************************665..4444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.35s 00:00:01.14 Elapsed: 00:00:00.61
# Mc/sec: 1736.38
//
Query:       MMETSP1325-20131115|4088_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 764.99
//
Query:       MMETSP1325-20131115|4089_1  [L=343]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-09   36.8   0.1    2.5e-09   36.1   0.1    1.4  1  PF02065.13 Melibiase
  ------ inclusion threshold ------
       0.06   12.1   0.0       0.13   11.0   0.0    1.6  2  PF01136.14 Peptidase family U32


Domain annotation for each model (and alignments):
>> PF02065.13  Melibiase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.1   3.7e-13   2.5e-09      77     150 ..       3      68 ..       2     125 .. 0.90

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 3.7e-13
  PF02065.13  77 lDDgWfge.RnddnasLGdwvvdeekfPnGlkaladkvhekglkFGlwvEPEmvsadsklyrehPdwvlkvadrs 150
                 +DD+W    R+ d    G +++d+ +fP+G+k +ad+vh  glk Gl++       ++ ++  +P + +++++  
  MMETSP1325-20131115|4089_1   3 IDDCWNAMdRDAD----GNLYADPVRFPQGIKGVADYVHGLGLKLGLYL-----DIGEATCGGYPAFNVSTDEDD 68 
                 7****87659999....********************************.....889999999998888776654 PP

>> PF01136.14  Peptidase family U32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.9e-05      0.13     155     189 ..      71     105 ..      68     152 .. 0.86
   2 ?   -3.1   0.0       0.4   2.7e+03     115     128 ..     252     266 ..     244     287 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.9e-05
  PF01136.14 155 dlclleelpelleaGvdslKIeGrmksaeyvaevv 189
                 d + +++++ ++e G+dslK++G ++++ ++  + 
  MMETSP1325-20131115|4089_1  71 DAQYIKDVNLMAEWGIDSLKVDGCNQDPTWMNITY 105
                 778899999*******************9997665 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 0.4
  PF01136.14 115 nrgsCaqpcrk.pyg 128
                 ++g+C ++c   +++
  MMETSP1325-20131115|4089_1 252 KQGRCVKNCDGtSDQ 266
                 389999999865544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.33s 00:00:00.95 Elapsed: 00:00:00.50
# Mc/sec: 1643.90
//
Query:       MMETSP1325-20131115|4090_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 280.42
//
Query:       MMETSP1325-20131115|4090_2  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 268.98
//
Query:       MMETSP1325-20131115|4093_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|4094_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-08   33.2   0.0    3.9e-08   33.0   0.0    1.1  1  PF12695.2  Alpha/beta hydrolase family
    1.6e-06   28.0   0.0    1.7e-06   27.9   0.0    1.0  1  PF12697.2  Alpha/beta hydrolase family
    1.4e-05   24.5   0.0    1.6e-05   24.3   0.0    1.0  1  PF02129.13 X-Pro dipeptidyl-peptidase (S15 family)
    2.8e-05   23.6   0.0      3e-05   23.5   0.0    1.0  1  PF00561.15 alpha/beta hydrolase fold
    8.9e-05   21.9   0.0     0.0001   21.7   0.0    1.1  1  PF00756.15 Putative esterase
     0.0005   19.2   0.0    0.00053   19.1   0.0    1.1  1  PF00326.16 Prolyl oligopeptidase family
  ------ inclusion threshold ------
      0.052   13.1   0.0       0.06   12.9   0.0    1.1  1  PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
      0.078   11.3   0.0       0.09   11.1   0.0    1.1  1  PF05448.7  Acetyl xylan esterase (AXE1)
       0.16   11.4   0.4       0.39   10.1   0.0    1.7  2  PF01764.20 Lipase (class 3)


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   2.6e-11   3.9e-08      25      93 ..       3      83 ..       1     100 [. 0.84

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 2.6e-11
   PF12695.2 25 rgfavvavdlpghgasegaa............aakrvlaadlldleriilvGhSlGGgvalelagrd.drvkglvllapfpd 93
                 g + v++d +g+g seg+             +++++l +d  ++ ri+++G+S+G+ +al++ag+  + vk +++ +pf +
  MMETSP1325-20131115|4094_1  3 LGASLVTLDTSGSGLSEGEYislghfeksdvfELTTFL-KDTGRATRIAVWGRSMGAVTALLYAGQLnPLVKCVIVDSPFAS 83
                58889999*******98888888888888888999999.99999*********************99788888888777743 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   1.1e-09   1.7e-06      24     103 ..       4      84 ..       2     106 .. 0.82

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 1.1e-09
                 TSEEEEE-----------S...S--H....HHHHHHHHHHHHH--..--EEEE--------HHHHHH----.EEEEEEE------ CS
   PF12697.2  24 gyrvvapDlpGhGrSdrppdydpdtl....edlaadlaalldalgl.rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgpl 103
                 g   v++D  G G+S++       +l      ++ +l  +l+ +g  +++ ++G S+G+++al++a +   lv+ +++ +p+++l
  MMETSP1325-20131115|4094_1   4 GASLVTLDTSGSGLSEGEY----ISLghfeKSDVFELTTFLKDTGRaTRIAVWGRSMGAVTALLYAGQLNPLVKCVIVDSPFASL 84 
                 6678999********9854....333333356677999***9999978******************99888**********9965 PP

>> PF02129.13  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0     1e-08   1.6e-05      60     140 ..       7      86 ..       4     103 .. 0.91

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 1e-08
                 EEEEE----TT------TTTCCHHHHHHHHHHHHHHCTTBE-EEEE---TT---HHHHHTTS--TTB-EBEEBSB-SBCHH CS
  PF02129.13  60 vVvvdvrGtgaSeGeftvgsedevedgadvidWlakqpwsnGkVGmtGiSYdGttqlaaaatgvpalkaivpesaisdlyd 140
                  V  d+ G+g SeGe+++ +  e +d+ +    l+    +  +++++G S +++t+l+ a + +p +k+++  s+ ++l +
  MMETSP1325-20131115|4094_1   7 LVTLDTSGSGLSEGEYISLGHFEKSDVFELTTFLKDTGRA-TRIAVWGRSMGAVTALLYAGQLNPLVKCVIVDSPFASLNT 86 
                 5889******************************987544.59*******************************9998866 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0     2e-08     3e-05       3      79 ..       7      82 ..       5     103 .. 0.81

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 2e-08
                EEEEE--------E...S.GGGGSHHHHHHHHHHHHHHSTSSSEEEEE-B---HHHHHHHHHCGGGEEEEEEESB-- CS
  PF00561.15  3 viglDlrGvgySspaggpelphyttddlardleavldalglkkltlvGhSmGGmialayaaeypdrvkamvllgtva 79
                +++lD  G+g S       l h+   d+ +    + d    ++++++G SmG+ +al ya +    vk ++ ++++a
  MMETSP1325-20131115|4094_1  7 LVTLDTSGSGLSEG-EYISLGHFEKSDVFELTTFLKDTGRATRIAVWGRSMGAVTALLYAGQLNPLVKCVIVDSPFA 82
                68899999999995.2677777777777777777777777777********************************75 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   6.6e-08    0.0001     101     152 ..      35      84 ..      27     104 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 6.6e-08
                 CHHHHHHHHH-B----EEEE--THHHHHHHHHHHH-TTT-SEEEEES----T CS
  PF00756.15 101 eLlplldanfrtapdgravaGqSmGGlgALilalkhpdrFgsvssfSpivnp 152
                 eL  +l+++ r ++   av+G SmG+++AL++a +   + ++v++ Sp++++
  MMETSP1325-20131115|4094_1  35 ELTTFLKDTGRATRI--AVWGRSMGAVTALLYAGQLNPLVKCVIVDSPFASL 84 
                 666677777766666..********************************886 PP

>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   3.5e-07   0.00053      46     102 ..      31      85 ..       8      96 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 3.5e-07
                 HHHHHHHHHHHH-----GGGEEE--------HHHHHHHH-GGG---EEEE-----TT CS
  PF00326.16  46 dDfiaaaealakegyvdpdrlaitGgSyGGylvgaalnqrpdlFkaavaqvgvvdwl 102
                 +D+++ + +l+++    + r+a++G S G ++++  ++q + l k+++  ++++ + 
  MMETSP1325-20131115|4094_1  31 SDVFELTTFLKDT--GRATRIAVWGRSMGAVTALLYAGQLNPLVKCVIVDSPFASLN 85 
                 6777777777555..6789**********************************9875 PP

>> PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     4e-05      0.06      19      54 ..      46      80 ..      28      96 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4e-05
                B-------B------HHHHHHHHHSS.S---EEEE-- CS
   PF08840.6 19 vkkdkigllGiSkGgelalllasflk.kisavvling 54
                    +i++ G+S G+ +all a  l+  +++v++ ++
  MMETSP1325-20131115|4094_1 46 A--TRIAVWGRSMGAVTALLYAGQLNpLVKCVIVDSP 80
                3..59********************978888887665 PP

>> PF05448.7  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   5.9e-05      0.09     175     210 ..      47      83 ..      33     101 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5.9e-05
                 TG---B-------HHHH.HHHH-S--S-EEEES-SS- CS
   PF05448.7 175 ervvvlGasqGGalala.vaaleprvkkvvadyPfLs 210
                 +r++v G s G   al  ++ l+p vk v++d Pf s
  MMETSP1325-20131115|4094_1  47 TRIAVWGRSMGAVTALLyAGQLNPLVKCVIVDSPFAS 83 
                 79*********9999872556**************76 PP

>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.53     8e+02      72      80 ..       2      10 ..       1      30 [. 0.86
   2 ?   10.1   0.0   0.00025      0.39      54      84 ..      36      67 ..      20      87 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.53
                -----HHHH CS
  PF01764.20 72 SLGGalAlL 80
                SLG++l +L
  MMETSP1325-20131115|4094_1  2 SLGASLVTL 10
                999999998 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00025
                HHH.HHHHSTTSEEEEE-------HHHHHHHH CS
  PF01764.20 54 lkr.llekypdykivvtGHSLGGalAlLaaad 84
                l + l    + ++i v G S+G+ +AlL a +
  MMETSP1325-20131115|4094_1 36 LTTfLKDTGRATRIAVWGRSMGAVTALLYAGQ 67
                455355566689****************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.29u 0.47s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 506.92
//
Query:       MMETSP1325-20131115|4095_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-17   62.6   0.2    3.6e-17   62.2   0.2    1.2  1  PF02310.14 B12 binding domain


Domain annotation for each model (and alignments):
>> PF02310.14  B12 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2   0.2   2.6e-21   3.6e-17       2     118 ..      32     146 ..      31     149 .. 0.94

  Alignments for each domain:
  == domain 1    score: 62.2 bits;  conditional E-value: 2.6e-21
  PF02310.14   2 kvvlatvggdvhplGlayvaaalraaGfeveildanvenedivealaaeepdvvglSalftssleaakelara.akrvrprvkvvvGGahvtaapeevleakpgvddvvlgegedale 118
                 ++++a++g+d h+ G++++a+ +++ G++v+i  + +++e++++++ +++++vvg+S+    + + +  l+++  kr  +++kv++GG+++  ++e+++    g  ++++g g+  + 
  MMETSP1325-20131115|4095_1  32 RILVAKMGQDGHDRGAKVIASGFSDIGYDVDIGPLFQTPEEVAQQAIDSDVHVVGISSQAAGHKALVPVLVEElKKRDASHIKVICGGVIPPQDYEFLMG--YG-VAAIFGPGTRITT 146
                 799*******************************************************99*************999999******************998..79.677****987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      389  (0.0284523); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 810.68
//
Query:       MMETSP1325-20131115|4096_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   15.4   2.1       0.46   10.6   0.2    2.5  2  PF02985.17 HEAT repeat


Domain annotation for each model (and alignments):
>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   3.3e-05      0.46       1      26 [.       4      29 ..       4      34 .. 0.90
   2 ?    4.2   0.1    0.0036        50       4      28 ..     108     132 ..     105     134 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 3.3e-05
                HHHHHHHHHTSSSHHHHHHHHHHHHH CS
  PF02985.17  1 llPlllkllnDpspeVReaAaeaLga 26
                ++P++l+ll+D++  V +aA++ L  
  MMETSP1325-20131115|4096_1  4 VFPVVLSLLKDSAKTVAAAALSVLDS 29
                58*******************98865 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0036
                 HHHHHHTSSSHHHHHHHHHHHHHHH CS
  PF02985.17   4 lllkllnDpspeVReaAaeaLgala 28 
                 +l+ ll + + + R+ +a+aL+ l+
  MMETSP1325-20131115|4096_1 108 ALMGLLGHREIKTRDLTAQALSVLL 132
                 68899****************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.47s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 885.18
//
Query:       MMETSP1325-20131115|4097_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.1    9.6   8.6          2    8.8   4.5    2.3  2  PF00816.16 H-NS histone family


Domain annotation for each model (and alignments):
>> PF00816.16  H-NS histone family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.11   1.6e+03      12      38 ..      58      84 ..      45     112 .. 0.72
   2 ?    8.8   4.5   0.00014         2      13      60 ..     123     170 ..     113     202 .. 0.65

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.11
                XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF00816.16 12 keaeeaekkekkaalaeirelaaeyGl 38
                 +ae+ +k+e  a +++i + a+++ +
  MMETSP1325-20131115|4097_1 58 SAAEKITKEELLAIIQNIPSFATKHSM 84
                566777788888888888777777654 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00014
                 XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX......XXXXXX.XXXXX---- CS
  PF00816.16  13 eaeeaekkekkaalaeirelaae.yGltleel.....aagrakkkakkkrakvp 60 
                 e+ e ek+ek +  ++ +e++ae +G+t+eel     a      ++  ++ +++
  MMETSP1325-20131115|4097_1 123 EKVETEKREKLDMEEKRQEAMAEaNGITPEELkkmktA------SKGPAKPPRA 170
                 34455666666666666666655389******543321......2222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       780  (0.0570509); expected 273.4 (0.02)
Passed bias filter:                      462  (0.0337917); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.40s 00:00:00.95 Elapsed: 00:00:00.54
# Mc/sec: 1113.86
//
Query:       MMETSP1325-20131115|4098_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-16   58.3   0.3    1.1e-15   57.5   0.2    1.4  1  PF02874.18 ATP synthase alpha/beta family, beta-barrel domain


Domain annotation for each model (and alignments):
>> PF02874.18  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.2   7.8e-20   1.1e-15       1      68 [.      19      80 ..      19      81 .. 0.97

  Alignments for each domain:
  == domain 1    score: 57.5 bits;  conditional E-value: 7.8e-20
                ETCC---EEEEE-STTEE--TTTEEEEEEEEES-EEEEEEEEE-SSEEEEEEB---TT-B----EEEE CS
  PF02874.18  1 ivqviGpVvdvefgigrlpgiynalkvelvefgklvlgvalnlgddkVriiamgstdGlkrGdeVkdT 68
                i +v Gp+v++e++ g   ++y+++kv+  +   +++g+++ l++d++ i+++++t+Gl++Gd+V++T
  MMETSP1325-20131115|4098_1 19 IFRVAGPLVIAERMTG--AAMYELVKVG--H--YNLVGEIIKLEGDTASIQVYEDTSGLTVGDPVIRT 80
                679*************..**********..8..99********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 487.00
//
Query:       MMETSP1325-20131115|4091_1  [L=1557]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     1e-187  625.2   0.0   1.5e-187  624.7   0.0    1.2  1  PF00063.16 Myosin head (motor domain)
    1.3e-06   27.8   0.0      3e-06   26.7   0.0    1.6  1  PF02736.14 Myosin N-terminal SH3-like domain
    0.00069   19.6   0.0     0.0017   18.4   0.0    1.6  1  PF00536.25 SAM domain (Sterile alpha motif)
     0.0068   16.1   0.0       0.02   14.6   0.0    1.8  1  PF07647.12 SAM domain (Sterile alpha motif)
  ------ inclusion threshold ------
      0.016   14.2   0.3      0.047   12.7   0.0    1.9  2  PF03193.11 Protein of unknown function, DUF258
      0.031   14.2   0.0       0.11   12.4   0.0    1.9  1  PF13401.1  AAA domain
      0.075   12.7   0.0       0.32   10.6   0.0    2.1  2  PF13543.1  SAM like domain present in kinase suppressor RAS 1


Domain annotation for each model (and alignments):
>> PF00063.16  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  624.7   0.0  7.4e-191  1.5e-187       1     688 [.      84     755 ..      84     756 .. 0.94

  Alignments for each domain:
  == domain 1    score: 624.7 bits;  conditional E-value: 7.4e-191
                 -SBGGGSSS-SHHHHHHHHHHHHHTT--EEE---EEEEE--SS--STSSHHHHHHH----GGGS-S-HHHHHHHHHHHHHHHTSEEEEEEE-------HHHHHHHHHHHHHHS-SSTT....-TTHHHHHHHHHHHHHHH---BEESSETTB-----EEEEEEBTTTBB---EEE--S--GGGGT---TT--SBHHHHHHHTTTTHHHHHHTT--.-CCGSCCCHT----SBTTB-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH-----EEEECTTCCCEESTHHH.HHHHHHHHTS-HHHHHHHHHSEEEEES.SEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SS.--SEEE-EEE-------SSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGCCS--.SCCHHHHHHHHSS----HHHHHHHHTSTTS..-HHHHHHHHHHHHTTTST.......TEE-TTTS.......TTT-SSEEEEEESSCEEEEE-TTHHHHHH--S-HHHHHHHHT-SSHHHHHHCHSHCH...................CSTTBTCHHC-CHHHHHHHHHHHHHHHHCTSEEEEEEEE-S-TT--TT---HHHHHHHHHH---HHHHHHHH----EEEEHHHHHHHHGGGSCTCS.CSTT--SSHHHHHHHHHHHT....T--GGGEEB---EEEE CS
  PF00063.16   1 vedlaaltqlsetsllenLkkrytsdliytysGlvlisvNpykklpiyseeiieeykgkkreelppHifalAdeAYrsmlrrkenqsivisGESgagkTeatkkliqylasvssstek...aeeeeleskilqanpileafgnaktlrnnnssrfGkfleiqfdasgsivGakietylLeksRvvsqekgeRnFhiFYqLlagasaeekeelkLk.daksYaylsqsgqlkvdgidDaeefketrkalkilglkeeeqreifkvlAaiLhlGnikfkedqkeeqavvedkee.lekiaellgvdveelekallkrriktg.revvtkalnkeqaedardaLakaiYsrLfdwivekiNealsakedkaaaviGvlDiaGFeifeknsfeqlciNyanEkLqqffnehifkleqeeyeregieweeidygldnqavidLiekkpaGilsllDeecrlpka..tdesflekllktfeskhl.......kfskkrls.......karaessftvkHyAgeVeYsaegflekNkdplsedlvellkssssslvaelfkeeelaedfeeeeaaaesaklgsakgksgkkkkfetvgsqfkeslgelmktLrstnphfvrCikPneekkakkfdsklvleqlkclGvlegirirraGfpsriafdefaerykllaekelvklselvgdekkacekilkel....eldkeeyrvGktkvFf 688
                 ved+ +l  l+e+s+l n+  r+ +d+iyt+sG +li++Np+k lpiy e++i+ y+++  +   pH f  A++AY++m++++ nq++vi+GESgagkTe tk+++qyl ++s++ e    a+  ++ +ki+++np++eafgnaktlrnnnssrfGkf++++++ + +i+G++i++ lLek R+v+q++geRnFhiFYqL aga     ++++L+  a++ +y++   +++v  ++D ee+ et k++k++++++ e+ +++k++A++L+lGn+kf +++  ++av   +   l+++a++lgv++++l++al++r+ +++ +  v+ + n+eq++  rda +k +Ys+Lfdw+v++iN++l+ ++ ++  +iG+lDi+GFe ++ n+feql iN++nE Lq++fn+ ifk+e eey+re+i w+++ +  dn+++i +++k+p G+l  lD ec++  a  + e +++k ++++ ++h        +      s       k++++++f v+H+Ag + Y++++f++kN+d+l   + ++l +s+++lva+l++  +                     +++++  ++ tvg +f  +l++l+ +Lr++++ fvrCik ne+ +++ +d+k vl ql c+Gv++ + +rraGfpsr+ ++ef++ +++ + k         +++k+ ++k++k+      + + +yr+G+tk+F+
  MMETSP1325-20131115|4091_1  84   755
                 69***************************************************************************************************************9988788788899***************************************************************************9986....57899876777888888..999**********************************************999..66666555556**********************997763778********************************************************************************************************.8*************************988755778999***9999.777746544331......13344567899**************************************************965.....................5788888889******************************************************************************99998853.....46899999999999988888889***********7 PP

>> PF02736.14  Myosin N-terminal SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   1.5e-09     3e-06       3      36 ..      15      48 ..      13      51 .. 0.94

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 1.5e-09
                EEEESSTTS--EEEEEEEEESSEEEEEETTTEEE CS
  PF02736.14  3 lvWVpDpkegyikGeItsrkgdkvtVktedgktv 36
                l+WV+Dp+ +y++++ + + g+  tV+t+ g+t 
  MMETSP1325-20131115|4091_1 15 LCWVSDPNQAYVEAVFKGISGNIATVETAQGQTL 48
                8*******************************96 PP

>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   8.6e-07    0.0017       4      53 ..    1291    1344 ..    1288    1345 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 8.6e-07
                  T-SSHHHHHHHTT-GGGHHHHHCT--SHHHHTT--HHH...HHH.H-------H CS
  PF00536.25    4 svedVgeWLesiglgqYvdnFrageidgdallllteed...Lek.lgvtllGHr 53  
                   +++V++WL++ gl++Y++   +    ++ l+ +t+ed   L++ lg+ +lG r
  MMETSP1325-20131115|4091_1 1291 APQSVSDWLDEVGLSKYREAICSYAGELHDLAMMTDEDideLVAeLGMPKLGAR 1344
                  689******************777778999999999997777777777777766 PP

>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0     1e-05      0.02       5      56 ..    1291    1345 ..    1289    1347 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1e-05
                  HHHHHHHHHHHT--CCSHHHHHHHTS-SCTCCCSSCHHHH....HCCCHHCHHHHH CS
  PF07647.12    5 sledvaeWLrsiglkqYtenFrdqgitggelllrlteedL....krlGitsvghrk 56  
                  ++++v +WL+++gl +Y e+  +   +  + l+ +t ed+    ++lG+ + g r+
  MMETSP1325-20131115|4091_1 1291 APQSVSDWLDEVGLSKYREAICSYAGEL-HDLAMMTDEDIdelvAELGMPKLGARR 1345
                  689******************9999999.999999999999987799999999986 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.4e-05     0.047      11      56 ..     144     189 ..     133     254 .. 0.82
   2 ?   -2.5   0.1       1.1   2.2e+03      94     117 ..     460     482 ..     458     490 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.4e-05
                 ---EEEEEECHHHTT-HHHHHHCTTSBEEEE-------HHHHHHH- CS
  PF03193.11  11 lgyevlvlsvktkegleelaellkdktsvlvGqSGvGKSsLinall 56 
                  g + + + ++ ++++++++++  ++ +v++G+SG+GK+  ++ +l
  MMETSP1325-20131115|4091_1 144 YGSQAPHCFMEAEDAYQQMKKTQLNQAVVICGESGAGKTETTKLML 189
                 4567788899999*************************97666555 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.1
                 ----TS--GCCS-CCCHGGGSCCH CS
  PF03193.11  94 tPGfrelelekvekeelaelFpei 117
                 t Gf++l ++ +++e l+++F++i
  MMETSP1325-20131115|4091_1 460 TNGFEQLFIN-TTNEMLQKVFNDI 482
                 7799999999.999********98 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.7e-05      0.11       5      29 ..     169     193 ..     164     285 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.7e-05
   PF13401.1   5 gilvvtGesGvGKTtllrrlarqld 29 
                 + +v++GesG+GKT + + +++ l 
  MMETSP1325-20131115|4091_1 169 QAVVICGESGAGKTETTKLMLQYLS 193
                 679*************998887653 PP

>> PF13543.1  SAM like domain present in kinase suppressor RAS 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       3.4   6.6e+03      64      92 ..     316     344 ..     307     348 .. 0.75
   2 ?   10.6   0.0   0.00017      0.32      68     128 ..    1294    1353 ..    1278    1354 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 3.4
   PF13543.1  64 qeypkleqwLrvvglsqetieailkkllt 92 
                 +ey +  + ++ v++s+ +i  ++k + +
  MMETSP1325-20131115|4091_1 316 EEYAETIKSMKAVDISDGEIDNVMKIVAG 344
                 67888888889999999999988876655 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00017
   PF13543.1   68 kleqwLrvvglsqetieailkklltleqlLemsdeelkeilekvgaeeeevrrllaalknL 128 
                  ++++wL  vgls+   eai++    l++l  m+de++ e+++++g+ + + rr+++ ++ L
  MMETSP1325-20131115|4091_1 1294 SVSDWLDEVGLSKYR-EAICSYAGELHDLAMMTDEDIDELVAELGMPKLGARRFRKQVSRL 1353
                  6899*******9765.8999*********************************99988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1557 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       696  (0.050907); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 2.08u 0.40s 00:00:02.48 Elapsed: 00:00:00.88
# Mc/sec: 4239.92
//
Query:       MMETSP1325-20131115|4092_1  [L=1171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-16   58.9   0.0    5.9e-16   58.0   0.0    1.4  1  PF00179.21 Ubiquitin-conjugating enzyme
    3.6e-05   23.6   1.2    0.00012   21.9   0.8    1.9  1  PF12898.2  Stc1 domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0   8.6e-20   5.9e-16       1     109 [.      28     150 ..      28     175 .. 0.83

  Alignments for each domain:
  == domain 1    score: 58.0 bits;  conditional E-value: 8.6e-20
                 HHHHHHHHHHHS-TTCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-----...B-HGGGSTTT........--TT--HHHHHHHHHHHH...H CS
  PF00179.21   1 rlqkelkelskkkpegikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvdetGe...icldiLkeek........WspaltlesvLlsiqsll...a 109
                 rl  +++el++ + e   a  +++++l  +++ i g++g  +eg + +l i+  e YPf PP v++ t   HPnv ++G+   +cld+L+ ++        Wspa +l+  L+++ s++   +
  MMETSP1325-20131115|4092_1  28 RLVADIAELERAPVERAAAVAIDEDHLGVFHCNIAGADGAAWEGLVLHLIITCGEAYPFAPPVVEVCTYYPHPNVVAHGQsykVCLDMLEPRTpdsrafecWSPAFSLRALLVQLTSIIgcdD 150
                 5667777888888888888888888***************************************************99954448******55566667888***************9986541 PP

>> PF12898.2  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.8   1.7e-08   0.00012      48      82 ..     349     383 ..     309     385 .. 0.88

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1.7e-08
   PF12898.2  48 ereleCskCkktkpleeFskkqrrqkdparCsecv 82 
                 +  l Cs+C+kt + ++Fs++q+++    rC++c+
  MMETSP1325-20131115|4092_1 349 QPTLPCSSCGKTHNRKKFSRSQLEKGSDRRCMDCI 383
                 55679********************9999*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.57u 0.38s 00:00:01.95 Elapsed: 00:00:00.83
# Mc/sec: 3380.88
//
Query:       MMETSP1325-20131115|4099_1  [L=784]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-78  263.5   0.0    3.2e-78  262.8   0.0    1.3  1  PF00501.23 AMP-binding enzyme
    3.4e-05   23.9   0.1    7.9e-05   22.7   0.0    1.5  1  PF00550.20 Phosphopantetheine attachment site


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.8   0.0   4.7e-82   3.2e-78       1     410 [.      43     508 ..      43     514 .. 0.89

  Alignments for each domain:
  == domain 1    score: 262.8 bits;  conditional E-value: 4.7e-82
                 EHHHHHHHHHHHHHHHHH----TT-EEEEE-SSSHHHHHHHHHHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHHHHHHHHHHHCTTCTTECCS-EECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTSEEEEES-.TTCCHHCTTTHHHHTTT-EEEEESSCCT.T-HHHHHHHHHHCT-SEEE--HHHHHHHHHHCHC......CCTTTTT--EEEE-----THHHHHHHHHHTT......SEEEEEE--CGGSSESEECCS-HHH..................................CCH---EBSTTTEEEEEBSTT.-......BEE-S----EEEESTTS--B-TT-HHHHHHHBCCSTT.....EEE---EEEE-TT--EEEE--GGGEEE----EEEHHHHHHHHHTS CS
  PF00501.23   1 TYreldervnrlaagLrklGvkpgdrVaillpnspewviaflaclkaGavyvplyptlpaerlayilndseakvlitddelltklleaaskelakekliivrtdkeedsvgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpddrvlsllp.lhfdgsilellaplllGatvvlvspedl.kdpalllddiekykvtvlalvptvlelllkaiek......kkldlsslrlilsggeplspellerlreafg.....girivngYGltEttgvvtvslpgdee.................................tkpgsiGrplpgvevkivdeeg.k......evppgevGEllirgpgvakGYlkdpeltaeafdedgw.....lyrTGDlgrldedGyleiiGRkkdqikirGeniepgeiEsalleh 410
                 TY+e+d++ ++laa+L+    kpgdrV +++++s+ ++++flac++aG ++vp++p++p++  +++  ++ ++     +  lt++++ a k+ a++k+  +++ k  + + + +++l  + ++ ++++ p++ +dp+d+a+++yTSG+T +PKGVm++h+nl++++  i++ ++ +++ + +s+lp +h +g+i+  l++l++G+t +++sp+ + k+p l+l++++ky+ t+l+++ +++ l  ++  +        ldlss+ ++++++ep++p +le ++++f+     + +++++YGl+E+t++v+       +                                 +k      p+  v v + d+e+        +++   vGE+++r+++ a+GY+++pe+  e f +        ++rTGDlg+l+  G+l+i+GR kd+i++rG+n +p++iE  +  +
  MMETSP1325-20131115|4099_1  43 TYQEVDAKTRALAAHLLTV-CKPGDRVLLVFEPSLLYIMSFLACVRAGLIAVPVFPPDPRKLKKDMYMFVTITGNCGAAVALTSTSYNAYKRMADLKNMFSNDAKWPELEWVIVDELPGVMSASAASASPSAVPDPNDIAFLQYTSGSTSEPKGVMISHENLAHNLTMIIHELKADQSTVCVSWLPqYHDMGLIGSYLGTLYCGGTGYYMSPFAFlKNPLLWLQTVSKYRGTHLQAPSFAYALASRKYAAlkrpltPVLDLSSIEHMINAAEPVDPLALETFYATFEpfgltRGVVFPTYGLAEHTVFVCSGGTQVLRvdkaalersnevrvctgpeepseavmvgcgfpaRKRPEGVEPVEVVIVAVSDDEEgTgaspsaPLGEDKVGEIWVRSASKAQGYWGMPEKSSEDFGATLGgrsetFLRTGDLGFLHG-GELFICGRLKDLIILRGRNHYPQDIERCVEGV 508
                 9****************65.789*************************************88888888877777777777777777777777777777666543322234555666667777777777777778************************************************************************************************************99999988999999******************************************************99988888999******************************6666666777777777777766541222225555667*************************999999****************.**************************987765 PP

>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   1.2e-08   7.9e-05       8      63 ..     657     715 ..     648     717 .. 0.79

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 1.2e-08
  PF00550.20   8 aevlgldpdei..dldtdlfelGlDSllaveliarleeefgveipve.dlfelptlael 63 
                 a+v + d++ +    d  l  lGlDSl ++++  +le ++g+ +p + + f+ +tl+e+
  MMETSP1325-20131115|4099_1 657 ADVVNFDAETLreQTDVALVTLGLDSLGLAQMKQMLEYQYGCPVPDDwMYFDTTTLEEV 715
                 555554446663345555678**************************88889***9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (784 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.15u 0.36s 00:00:01.50 Elapsed: 00:00:00.60
# Mc/sec: 3131.24
//
Query:       MMETSP1325-20131115|4100_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-10   40.9  41.1    9.9e-05   22.2   5.0    4.5  5  PF00020.13 TNFR/NGFR cysteine-rich region


Domain annotation for each model (and alignments):
>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   1.6   1.2e-05      0.16      18      39 .]      57      78 ..      55      78 .. 0.94
   2 !   20.0   3.5   3.5e-08   0.00047      15      39 .]      78     102 ..      73     102 .. 0.95
   3 !   22.2   5.0   7.2e-09   9.9e-05      13      39 .]     100     126 ..      98     126 .. 0.94
   4 !   14.9   3.5   1.4e-06     0.019      15      39 .]     126     150 ..     125     150 .. 0.98
   5 ?   -3.9   0.2         1   1.4e+04      18      22 ..     153     157 ..     151     157 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.2e-05
                EE-B-TTCEEEB--BTTB--EE CS
  PF00020.13 18 CskCepgtvlvspCtetqnTvC 39
                C +C++g++ v++Ct+  + vC
  MMETSP1325-20131115|4100_1 57 CGPCDSGSYQVTECTSVYDQVC 78
                9**************9999888 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 3.5e-08
                 EEEEE-B-TTCEEEB--BTTB--EE CS
  PF00020.13  15 ClsCskCepgtvlvspCtetqnTvC 39 
                 C +C+ C +g++++++Ct++ nT+C
  MMETSP1325-20131115|4100_1  78 CANCTACGEGFYESNECTPEFNTEC 102
                 ************************* PP

  == domain 3    score: 22.2 bits;  conditional E-value: 7.2e-09
                 EEEEEEE-B-TTCEEEB--BTTB--EE CS
  PF00020.13  13 rqClsCskCepgtvlvspCtetqnTvC 39 
                  +C++C+ Ce gt+  + C  tq+TvC
  MMETSP1325-20131115|4100_1 100 TECTACTVCEYGTYTATACGGTQDTVC 126
                 46************************* PP

  == domain 4    score: 14.9 bits;  conditional E-value: 1.4e-06
                 EEEEE-B-TTCEEEB--BTTB--EE CS
  PF00020.13  15 ClsCskCepgtvlvspCtetqnTvC 39 
                 C+ C+ C   +++  +C++ +nT+C
  MMETSP1325-20131115|4100_1 126 CDTCTVCGDMEYELVECSAGSNTQC 150
                 9************************ PP

  == domain 5    score: -3.9 bits;  conditional E-value: 1
                 EE-B- CS
  PF00020.13  18 CskCe 22 
                 C  Ce
  MMETSP1325-20131115|4100_1 153 CAVCE 157
                 77775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       595  (0.0435196); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 979.94
//
Query:       MMETSP1325-20131115|4103_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-16   58.9   0.0    4.4e-16   58.8   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   3.3e-20   4.4e-16     240     299 ..       1      68 [.       1      80 [. 0.82

  Alignments for each domain:
  == domain 1    score: 58.8 bits;  conditional E-value: 3.3e-20
                 HHHHHHHH----S------TT--......--EEEEE--........-TTS--EEEGGGTEEEE---SSHHHHH CS
  PF00632.20 240 rrlfLkFvTGssrlPlgGfaelh......pkftivrks.......ededrLPtasTCfnyLkLpdYsskeilk 299
                 r++fL+FvTG+s++PlgGf++l       +kf     +       ++++r+P  +TCfn+L++p ++++e ++
  MMETSP1325-20131115|4103_1   1 RAKFLQFVTGTSQVPLGGFSKLAghlgeiKKF-----ElkwvtydAETSRYPRGHTCFNRLDIPAFPNREEMQ 68 
                 689*******************9555555444.....2333335457779********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 372.29
//
Query:       MMETSP1325-20131115|4102_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00028   20.4   1.0    0.00035   20.1   0.7    1.1  1  PF01027.15 Inhibitor of apoptosis-promoting Bax1
  ------ inclusion threshold ------
      0.014   15.0   3.0      0.017   14.7   2.1    1.2  1  PF01456.12 Mucin-like glycoprotein
       0.26   11.0   5.0       0.39   10.4   3.4    1.2  1  PF11100.3  Conjugal transfer protein TrbE


Domain annotation for each model (and alignments):
>> PF01027.15  Inhibitor of apoptosis-promoting Bax1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.7   7.6e-08   0.00035     129     199 ..       7      81 ..       3      88 .. 0.80

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 7.6e-08
  PF01027.15 129 mgliglivaslvn.i..flp....ssalellisaigvllfsglilydtqkikeralevdeyainaalsLyldfinlFl 199
                 ++  + + +sl+n    f +    ++  ++++s+i+  +      yd  +i  ++l++d+y ++a ++ y df+ +F+
  MMETSP1325-20131115|4102_1   7 IAWGITFTISLINqCngF-GpysmGKPGHFTMSWIITTMVLWWFSYDAARIE-TRLTPDDY-MMAVICFYSDFVIVFV 81 
                 444566777787754324.3588888889999999999999888****9995.689*****.***************8 PP

>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   2.1   3.8e-06     0.017       9      39 ..      76     106 ..      66     113 .] 0.76

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 3.8e-06
  PF01456.12   9 alLvlaLcCCasvCvtangeGqsdaavveaa 39 
                  ++v++ cCCa +C  ++ eG s +++++ +
  MMETSP1325-20131115|4102_1  76 FVIVFVCCCCAMICCGSSSEGGSPSSTITDE 106
                 489************9999998877776654 PP

>> PF11100.3  Conjugal transfer protein TrbE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.4   8.6e-05      0.39      12      58 ..      38      88 ..      34      93 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 8.6e-05
   PF11100.3 12 TviviSPvvyw.SWDaVk.eT..taddillavliilaagvllsvlylfvsv 58
                  i+   v++w S+Da + eT  t dd+++av+      v+++v+ ++  +
  MMETSP1325-20131115|4102_1 38 SWIITTMVLWWfSYDAARiETrlTPDDYMMAVICFYSDFVIVFVCCCCAMI 88
                556666666545***9873333489*********999999*****999776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       555  (0.0405939); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 501.46
//
Query:       MMETSP1325-20131115|4105_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       658  (0.0481276); expected 273.4 (0.02)
Passed bias filter:                      515  (0.0376682); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 421.58
//
Query:       MMETSP1325-20131115|4106_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.36s 00:00:00.62 Elapsed: 00:00:00.53
# Mc/sec: 171.81
//
Query:       MMETSP1325-20131115|4107_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-12   44.8   0.0      8e-12   44.5   0.0    1.1  1  PF00202.16 Aminotransferase class-III


Domain annotation for each model (and alignments):
>> PF00202.16  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   5.8e-16     8e-12     248     337 ..       2      94 ..       1      96 [. 0.95

  Alignments for each domain:
  == domain 1    score: 44.5 bits;  conditional E-value: 5.8e-16
                 C---.---EEEEE-HHHHTTS..HH--..-SSTT-HHHHHHHHHHHHHHHHTTHHHHHHH---TTTHHHHHHHCC-TTEEEEE-----EEEEE CS
  PF00202.16 248 ltgG.lplsavlataevmqaf..qpgshgttfggnplacavalavlevieeeellenaqekgerlkkgLeeLkekydvikevRgkGlliaiel 337
                 l+g+ lpls v  ++e+ + f  +p + g t+ ++p+a a a+++++ + +e+++ ++++++  + +g+++L ++++ +k+ Rg Gl++ i++
  MMETSP1325-20131115|4107_1   2 LSGSfLPLSVVGVKQEIKDHFmsSPLGWGATYQAHPVALACAYESVKHMVKEDVVGHVKKMEPVFLDGIQSLIDEHPSVKQGRGIGLFGCIDT 94 
                 89999****************666667**************************************************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.64
# Mc/sec: 625.30
//
Query:       MMETSP1325-20131115|4108_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.051   13.4   0.6       0.13   12.2   0.0    1.9  2  PF03992.11 Antibiotic biosynthesis monooxygenase


Domain annotation for each model (and alignments):
>> PF03992.11  Antibiotic biosynthesis monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.19   2.7e+03      55      76 ..      70      92 ..      65      94 .. 0.81
   2 ?   12.2   0.0   9.2e-06      0.13      11      76 ..     156     239 ..     145     241 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.19
                EEESSHHH.HHHHHTSHHHHHHH CS
  PF03992.11 55 eeWeseaa.frahlksphfkaah 76
                + ++s++a f +h + p+ +a++
  MMETSP1325-20131115|4108_1 70 ASFDSKDAyFVDHKARPSNQAFV 92
                56789999899999999988876 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 9.2e-06
                 EGGHHHHHHHHHHHHHHHHHTT-----EEEEE..................ECTTSCEEEEEEEEESSHHHHHHHHTSHHHHHHH CS
  PF03992.11  11 kpgaeeafeeafaeaaesllaeepGflgyell..................rstddpdevvvieeWeseaafrahlksphfkaah 76 
                 +++a++  +e+++ + ++ l++e+G l+++l+                   ++dd+ +v  +e + + +a+  h ++ph+ +  
  MMETSP1325-20131115|4108_1 156 DAEAAARIVELVKAYGPQQLSAEEGALRVSLVpphltgvpgvgatdlpggFPSDDEVTVTWVESFSDLEAYNTHKDAPHVTELF 239
                 56788899999999999999**************999999999988666547888889*********************98866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.57
# Mc/sec: 1111.41
//
Query:       MMETSP1325-20131115|4110_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-27   93.9   6.2    4.9e-27   93.3   4.3    1.3  1  PF00226.26 DnaJ domain
  ------ inclusion threshold ------
      0.022   15.2   5.6      0.032   14.6   3.8    1.4  1  PF03964.10 Chorion family 2
      0.071   13.4  13.8       0.11   12.8   9.5    1.3  1  PF07172.6  Glycine rich protein family


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.3   4.3   1.1e-30   4.9e-27       1      64 []       8      70 ..       8      70 .. 0.99

  Alignments for each domain:
  == domain 1    score: 93.3 bits;  conditional E-value: 1.1e-30
                HHHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26  1 dyYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevLsdpekraeyd 64
                dyY+ Lgv+k+a+d+++kkaYrklalk+HPDkn+dd+  aeekfk ineAy++Ls+++kra yd
  MMETSP1325-20131115|4110_1  8 DYYKRLGVDKSATDKDLKKAYRKLALKFHPDKNPDDA-SAEEKFKNINEAYDTLSNKDKRATYD 70
                8************************************.9************************8 PP

>> PF03964.10  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   3.8   6.9e-06     0.032      38      71 ..     117     160 ..      75     164 .] 0.76

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 6.9e-06
  PF03964.10  38 s..........gslvssssdssAaaaAasalaalnaGsykvwkv 71 
                 s            ++s s ds+AaaaAa+a+aa ++ s+ ++++
  MMETSP1325-20131115|4110_1 117 SneeaqrifsmFFGESASTDSQAAAAAAAAAAARQQLSPFLYNE 160
                 144556677777789999***************99988877666 PP

>> PF07172.6  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   9.5   2.4e-05      0.11      28      92 ..      48     117 ..      40     120 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.4e-05
   PF07172.6  28 lskeeksekeeevkdekyggggkh...ggGgygggggggngGGGykgggGgygggggggeggy..GgGyg 92 
                 ++ ++ +e  ++  ++++  ++ +   +g     +gg+g  GGG + g Gg+gggggg +  +  GgG  
  MMETSP1325-20131115|4110_1  48 EKFKNINEAYDTLSNKDKRATYDMvgpDGMSQVPNGGEGFSGGGMPPGFGGFGGGGGGVHFSGgrGGGMS 117
                 3444555556666655555555557664444556788899**************9999864443478765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       872  (0.06378); expected 273.4 (0.02)
Passed bias filter:                      631  (0.0461527); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.43s 00:00:00.92 Elapsed: 00:00:00.61
# Mc/sec: 644.27
//
Query:       MMETSP1325-20131115|4112_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-08   34.3   0.0    3.4e-06   26.4   0.0    2.1  2  PF00013.24 KH domain
      9e-05   21.9   0.2    0.00029   20.3   0.0    1.9  2  PF13014.1  KH domain


Domain annotation for each model (and alignments):
>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0011       7.4      24      57 ..       2      36 ..       1      37 [. 0.80
   2 !   26.4   0.0     5e-10   3.4e-06       4      47 ..      51      97 ..      48     108 .. 0.78

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0011
                HHHHHHT-E.EEE--S.E..EEEEEESHHHHHHHHHH CS
  PF00013.24 24 eIeeetgak.Idvpkd.r.dtvtisGdpesvekAkkl 57
                e+ e tg++ + +  d + + v+i G+p+ v  A + 
  MMETSP1325-20131115|4112_1  2 ELTESTGCShMSL--DwDaKCVHINGPPDDVVTAVAE 36
                6788899988888..44356************99875 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 5e-10
                EEEE.CCCCHHH---TTHHHHHHHHHH.T-EEEE--SE..EEEEEE.S CS
  PF00013.24  4 vkvp.nskigriIGkgGsnIkeIeeet.gakIdvpkdr.dtvtisG.d 47
                v  p + +++ iIGk G++Ik++++   g+k+++++   + v+i++ d
  MMETSP1325-20131115|4112_1 51 VPLPgEWMVPQIIGKAGAKIKALRKGHgGVKVEIDD-NlMAVVIEAkD 97
                566667899*************************65.47788888633 PP

>> PF13014.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       0.3   2.1e+03      15      23 ..       2      10 ..       2      12 .. 0.87
   2 !   20.3   0.0   4.2e-08   0.00029       2      28 ..      59      86 ..      58     107 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.3
   PF13014.1 15 eIreetGak 23
                e+ e tG++
  MMETSP1325-20131115|4112_1  2 ELTESTGCS 10
                7899***95 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 4.2e-08
   PF13014.1  2 vgliIGkgGetIkeIreet.GakIrfpk 28
                v+ iIGk G+ Ik +r+ + G+k+ +++
  MMETSP1325-20131115|4112_1 59 VPQIIGKAGAKIKALRKGHgGVKVEIDD 86
                5679***************99*****99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 640.77
//
Query:       MMETSP1325-20131115|4114_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.31s 00:00:00.65 Elapsed: 00:00:00.45
# Mc/sec: 553.82
//
Query:       MMETSP1325-20131115|4113_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.092   11.8   0.0       0.15   11.2   0.0    1.2  1  PF03976.9 Polyphosphate kinase 2 (PPK2)
        5.4    6.8   7.2        9.1    6.0   0.1    3.0  3  PF11127.3 Protein of unknown function (DUF2892)


Domain annotation for each model (and alignments):
>> PF03976.9  Polyphosphate kinase 2 (PPK2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.1e-05      0.15      95     150 ..     102     154 ..      95     158 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 2.1e-05
   PF03976.9  95 dRswYnragvervmgfctdkeaerflreipefErmlvesgillvKfwlsiskeeql 150
                 d  +Y+ a v+ +m+f+++++     ++i efE  l  +    + +w++  +e q 
  MMETSP1325-20131115|4113_1 102 DTVQYKVAXVTNLMDFADQETES---NSIDEFESDLELQRXSALNYWFAPPPEPQV 154
                 5669************9887765...68999*****************98877775 PP

>> PF11127.3  Protein of unknown function (DUF2892)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1    0.0013       9.1      29      52 ..       8      31 ..       1      34 [. 0.78
   2 ?   -3.5   0.3       1.2   8.4e+03      18      26 ..      59      67 ..      49      78 .. 0.48
   3 ?    4.2   0.1    0.0049        33      32      48 ..     148     168 ..     139     186 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0013
   PF11127.3 29 qgawgwllglvGavllvtgitgfC 52
                +++++ +l+++ a+l+++++  fC
  MMETSP1325-20131115|4113_1  8 KKGPARILAFISAGLIFRAVWFFC 31
                33447789***************9 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 1.2
   PF11127.3 18 aallllall 26
                +++l++a +
  MMETSP1325-20131115|4113_1 59 LLMLGWASV 67
                233333333 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.0049
   PF11127.3  32 w....gwllglvGavllvtgi 48 
                 +    ++ l+++G+v+lvt++
  MMETSP1325-20131115|4113_1 148 PppepQVNLLAIGFVFLVTAL 168
                 145568889999***999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 1568.52
//
Query:       MMETSP1325-20131115|4115_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-38  133.3   0.5    1.8e-33  116.1   0.3    2.0  2  PF01432.15 Peptidase family M3


Domain annotation for each model (and alignments):
>> PF01432.15  Peptidase family M3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.1   0.3   1.3e-37   1.8e-33      50     176 ..       2     136 ..       1     142 [. 0.94
   2 !   15.4   0.0   4.7e-07    0.0065     181     204 ..     168     191 ..     163     195 .] 0.90

  Alignments for each domain:
  == domain 1    score: 116.1 bits;  conditional E-value: 1.3e-37
                 ---SHHHHHHTTSTT-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT...----....---GGGHHHHHHHHHHHHHS--GGGTGGG-BHHHHHH--HHHHHHH---EEEEESSS....--SSTT--EEEEE CS
  PF01432.15  50 gyesyaelaledkmaknpetvldfleelvkklrpllekelkllkelkkke...lgle...gelqpwDvaYYsekqreekydldqeelkeyfpletvleGllelfeeLfGikfveekdak..gevwhedVrkleVv 176
                 gy+++a+++l+++mak+p +v++fle+l  kl+pl+ekel  l ++k++e   +gl+   + l+++D++YY ++++e++y++d e+l++yfpl++vl+Gl+++++e+fG++fv+++++     +wh++V ++ V+
  MMETSP1325-20131115|4115_1   2 GYPNHAAYRLKKRMAKTPANVQQFLEDLNYKLSPLAEKELGVLLKYKAAEveaRGLDedpSVLHMYDYRYYLNQVEEKDYQVDHEALRQYFPLDAVLDGLVDIYQEVFGLRFVRIDPETveVTTWHPEVLLFVVY 136
                 9**********************************************9999**5555458899**************************************************99998877899******99987 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 4.7e-07
                 ---E.EEEE---B--TT-----B- CS
  PF01432.15 181 segligeiylDlyerkgKrggAas 204
                 +e+l+g+ ylDl++r+ K g+Aa+
  MMETSP1325-20131115|4115_1 168 NETLLGYYYLDLFPRDDKFGHAAC 191
                 7899******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 898.63
//
Query:       MMETSP1325-20131115|4109_1  [L=546]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-57  190.7   0.0    1.4e-56  190.1   0.0    1.3  1  PF02800.15 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
    1.7e-05   24.6   0.3    9.7e-05   22.2   0.1    2.1  2  PF00044.19 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF02800.15  Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.1   0.0   2.1e-60   1.4e-56       1     157 []      57     219 ..      57     219 .. 0.99

  Alignments for each domain:
  == domain 1    score: 190.1 bits;  conditional E-value: 2.1e-60
                 -HHHHHHHHTTSEEEEEEEEEEEESS-T.........T-S-----S-ESSSSSS-----HHHHH-GGG---EEEEEEEES-SS-EEEEEEEEEE----HHHHHHHHHHSTT.....-TT----SHHHHHH-------GGG-SEEEEGGG-EEETTEEEEEEEE CS
  PF02800.15   1 LaplakvlndkfgiekglmttvhaytadQklvDgps.kdlrraraaaeniiptstgaakavgkVlpelkgkltgmAlrVPtpdvsvvdlvvelekkvtveevnaalkeaae.....galkgilsyteeelvssDfvgdphssifdaketivlnenlvkvvawy 157
                 Lap++kv+++++gi++g++tt+h +t++QklvD++  kdlrr+r+   n+ p+stgaa+ +gk++p+lkgkl+gmA+rVP+ + s++d+v+e+++++t+eevn  lk+ +e     g l+g+l+y+e +lvs+Df +d++ssi+da++t+v+n+++vk++awy
  MMETSP1325-20131115|4109_1  57 LAPVVKVVQESLGIKHGMITTIHDATGTQKLVDAACaKDLRRGRSGLLNMSPASTGAASMIGKIFPDLKGKLNGMAVRVPILNSSLTDCVFEVNRPTTAEEVNGFLKQYSEtpreqGGLQGVLGYEEMPLVSTDFCHDERSSIIDAESTMVVNGTQVKIYAWY 219
                 8*********************************99***************************************************************************9999999********************************************9 PP

>> PF00044.19  Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.1   1.4e-08   9.7e-05     115     151 .]      13      52 ..       7      52 .. 0.86
   2 ?   -0.9   0.0      0.18   1.2e+03      59      78 ..     201     220 ..     184     226 .. 0.70

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 1.4e-08
                 EEEESS--SS..SEB------GGG--...TTTSEEE---H CS
  PF00044.19 115 kVvisapakdeaaktivvgvNeeeyd...peekivsnaSC 151
                 kVvisapakde+  ++ vgvNe+ +d   p+++++++aSC
  MMETSP1325-20131115|4109_1  13 KVVISAPAKDETIDNFCVGVNEHLVDlnnPKHNVITAASC 52 
                 8********************98764222677******** PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.18
                 E---EEEETTEEEEEE--SS CS
  PF00044.19  59 veeeklivngkkikvlaerd 78 
                   e++++vng+++k++a  d
  MMETSP1325-20131115|4109_1 201 DAESTMVVNGTQVKIYAWYD 220
                 35677999****99987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.38s 00:00:01.20 Elapsed: 00:00:00.56
# Mc/sec: 2295.46
//
Query:       MMETSP1325-20131115|4111_1  [L=1380]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-52  176.0  13.2    5.2e-33  114.5   0.3    2.2  2  PF00664.18 ABC transporter transmembrane region
    1.2e-37  128.8   0.0    1.3e-19   70.5   0.0    3.4  3  PF00005.22 ABC transporter
    4.6e-11   42.2   5.6    9.3e-05   21.6   0.0    4.0  4  PF02463.14 RecF/RecN/SMC N terminal domain
    1.1e-07   31.1   2.2     0.0072   15.7   0.1    2.7  2  PF13555.1  P-loop containing region of AAA domain
    2.5e-06   26.6   0.0      0.066   12.2   0.0    2.3  2  PF03193.11 Protein of unknown function, DUF258
    3.6e-06   27.6   0.0      0.039   14.6   0.0    3.0  2  PF13207.1  AAA domain
    4.1e-06   26.4   1.9       0.19   11.5   0.0    3.9  2  PF13558.1  Putative exonuclease SbcCD, C subunit
    2.5e-05   24.2   0.0        0.3   10.9   0.0    4.0  4  PF13304.1  AAA domain
    9.4e-05   22.4   1.1       0.29   11.1   0.1    3.9  3  PF13401.1  AAA domain
    0.00014   21.6   0.1       0.16   11.6   0.0    3.1  3  PF01935.12 Domain of unknown function DUF87
    0.00026   21.2   1.8       0.23   11.6   0.0    3.1  2  PF13191.1  AAA ATPase domain
    0.00028   20.6   0.0       0.73    9.5   0.0    2.6  2  PF13671.1  AAA domain
     0.0012   18.3   0.4        2.4    7.6   0.0    3.8  4  PF13604.1  AAA domain
     0.0013   18.0   2.0        1.3    8.2   0.0    4.0  4  PF13481.1  AAA domain
     0.0019   17.7   0.1        1.1    8.8   0.0    2.6  2  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
     0.0022   17.2   0.5        1.8    7.5   0.0    3.4  4  PF12846.2  AAA-like domain
     0.0031   16.0   0.6      0.029   12.8   0.0    2.5  3  PF09818.4  Predicted ATPase of the ABC class
      0.004   16.5   0.0        1.3    8.3   0.0    2.3  2  PF01580.13 FtsK/SpoIIIE family
     0.0086   16.2   0.0        1.8    8.7   0.0    2.8  2  PF13238.1  AAA domain
     0.0098   14.5   0.0        2.2    6.7   0.0    2.3  2  PF00503.15 G-protein alpha subunit
  ------ inclusion threshold ------
      0.019   14.5   0.1        4.5    6.7   0.0    2.5  2  PF01583.15 Adenylylsulphate kinase
      0.065   12.8   0.0         18    4.9   0.0    3.5  3  PF07728.9  AAA domain (dynein-related subfamily)
      0.084   12.7   0.0        5.7    6.7   0.0    2.8  2  PF13521.1  AAA domain
       0.15   11.9   0.4         16    5.4   0.0    3.2  2  PF01926.18 50S ribosome-binding GTPase
       0.21   11.7   2.5        5.4    7.1   0.0    2.9  3  PF13476.1  AAA domain
        4.5    6.7   6.1         15    5.0   0.0    3.4  4  PF05729.7  NACHT domain


Domain annotation for each model (and alignments):
>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.5   0.3   9.8e-36   5.2e-33       5     249 ..      38     285 ..      34     297 .. 0.90
   2 !   65.0   4.8   1.2e-20   6.1e-18       5     243 ..     751     993 ..     747    1010 .. 0.76

  Alignments for each domain:
  == domain 1    score: 114.5 bits;  conditional E-value: 9.8e-36
  PF00664.18   5 illailagvtalvfplllgrlldsvsdgnde.....ersslyslailliavgvlivlllqgsfyl..lertgqrirkrlfrallrkilglfdsffdknsvGellsrltnDvskirdglgdklglffqslatfvgglivmfylgwkltlvllailpllilvsavlakilkslqkkeqkayakagavaeEalsgirtVkafggeekeleryekaleeakkagikkaitagllfgftqlisylsyalalwfgtfl 249
                  l+a  agv+ + + +l+  + d+++ ++ +     e+ +l++ ++++ +++v+ ++++++s++l  ++r+g++ rk    ++lr++ ++fd     ++  el s + + +  ++ glg klg  + + + ++gg++ +f+ +w +tlv l++ pl++   ++l+k++ +    ++kayakag  a+E++++i+tV a+  e++ +++y+ +l ea+ ag  +a+  g+ +g  ++ ++++    + +++f 
  MMETSP1325-20131115|4111_1  38 ALAATAAGVAGFGQIYLIVGWGDFLDVAANPadaraENLDLFLRMFVGTGLVVGTCAWIYTSLFLltGHRQGMYWRKYYLESVLRQDVSWFDV----HNPTELPSKIAEKTAAVQAGLGLKLGEGIFFGIQLLGGFVYAFFKSWEITLVSLVTAPLVGWGLYYLTKVTGEADGIMNKAYAKAGGNASETIENIKTVNALQCEDARVKEYDAHLIEARTAGEDRAKRIGFANGLVFSTGNFMTGTTILYFAFS 285
                 5666677777777888888888886655555556699999999999999999999999999999999**************************....***************************************************************************************************************************99999999999999999999887766666666 PP

  == domain 2    score: 65.0 bits;  conditional E-value: 1.2e-20
  PF00664.18   5 illailagvtalvfplllgrllds...vsdgndeersslyslailliavgvlivlllqgsfyllertgqrirkrlfrallrkilglfdsffdknsvGellsrltnDvskirdglgdklglffqslatfvgglivmfyl.gwkltlvllailpllilvsavlakilkslqkkeqkayak..agavaeEalsgirtVkafggeekeleryekaleeakkagikkaitagllfgftqlisylsyalal 243
                  + a l  v++ +  +++ +++ +   ++ ++ e    ++++ i+ ia+ +l +++ q   y+++ +  ++ + l+r l+r ++ +++ + d +++Gel+s+l +++  +  ++g++lg+ + + + ++  l+++f + + k++ + la+lp +++  ++   +++  +    ka+    a ++++E+++ irtV ++g +++ + ++e + + +  a   ka  +g +  f+q+  ++ + +++
  MMETSP1325-20131115|4111_1 751 VFGATLTAVNNAIVGIIFTKIITVlfeTNPKKLE-YDGATWCGIM-IASSFLSQFGEQLKAYGFGMMKAKVTQLLRRDLYRALITQDMTWYDLTPAGELTSLLGEECFMVPALTGEALGQTISFALSVIFSLGFAFSMgSAKVAGIFLAMLPFMMIGMVIEFAVITGASAPDAKASMGasAANIMSESVRSIRTVYSYGLQKNLIAEFEREFDVHLAAEKVKALGQGSSRFFSQATLFIGFGIVY 993
                 5555666666666666666666663334444444.4444444444.67778888888888888888888888999999999999999999999********************************************9677888888877777777777767777777777766644414667*************************9999988888877777776666666666666443333 PP

>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   0.0   2.5e-22   1.3e-19       1     118 []     415     552 ..     415     552 .. 0.89
   2 !   52.5   0.0   9.7e-17   5.1e-14       1     109 [.    1157    1273 ..    1157    1276 .. 0.92
   3 ?    1.3   0.1      0.72   3.8e+02     107     118 .]    1296    1307 ..    1289    1307 .. 0.90

  Alignments for each domain:
  == domain 1    score: 70.5 bits;  conditional E-value: 2.5e-22
                 HHHHHHHTTSS---...........---EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--...........----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkpt...........egeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk...........srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 ST ++l+ + ++p+           +g++++d  + dl++ ++++lr  i+ + q+p lf   t+ en++ +k+ + t+++ie+++++ + ++++ +              ++LSgGqkqrva+Ara++k+pk+llLDE+t+
  MMETSP1325-20131115|4111_1 415 STAVQLIERFYDPDnhdvpdqntskTGRVTLD--GVDLKELDINWLReqIALVGQEPVLF-AGTIGENIARGKPGA-TKEEIEHAAKMSNAHDFIMEfpkgydtdvggGGSGQLSGGQKQRVAIARAMIKDPKILLLDEATS 552
                 56666677777766555555555557888888..6789999999999*************.**************9.****************99999*********9999*****************************96 PP

  == domain 2    score: 52.5 bits;  conditional E-value: 9.7e-17
                  HHHHHHHTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--..........----------HHHHHHHHHHTT--S CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22    1 STLlklltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk..........srvstLSgGqkqrvalArallkkpk 109 
                  ST ++l+ + ++p++g + +d  + d++  +l++lr  ig + q+p lf + t++en++ +k++  t+++i e++++ +  +++ +            +++LSgGqkqrva+Ara++k  +
  MMETSP1325-20131115|4111_1 1157 STGVQLIERFYDPEKGAVLLD--GVDIKTLDLNWLRsqIGLVGQEPVLF-SGTIKENIALGKDNP-TEEEIVEAAKAANAYDFIMEqpegfdtqvgVGGGKLSGGQKQRVAIARAIIKGGE 1273
                  778899***************..5688999999****************.***********9997.****************55555*****************************99766 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.72
                  --SEEEEESTTT CS
                  xxxxxxxxxxxx RF
  PF00005.22  107 kpklllLDEPtn 118 
                  +p++llLDE+t+
  MMETSP1325-20131115|4111_1 1296 DPPILLLDEATS 1307
                  699*******96 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.21   1.1e+02      20      42 ..     398     419 ..     390     425 .. 0.68
   2 !   21.6   0.0   1.8e-07   9.3e-05     135     210 ..     493     595 ..     434     600 .. 0.72
   3 ?    0.8   0.1      0.41   2.2e+02      19      39 ..    1139    1158 ..    1126    1171 .. 0.76
   4 !   16.8   0.0   5.1e-06    0.0027     132     211 ..    1264    1351 ..    1174    1358 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.21
                 -----SEEEE--------HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14  20 lpfsksftaivGpNGSGKsnvld 42 
                 ++  +   a vG+ GSGKs  ++
  MMETSP1325-20131115|4111_1 398 IEAGT-TVAFVGASGSGKSTAVQ 419
                 44443.45679********8765 PP

  == domain 2    score: 21.6 bits;  conditional E-value: 1.8e-07
                 T.............................G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BT..BEEEEE-S-HHHHTT-SEEE- CS
                 x.............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 135 e.............................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkekskn..aQfivislreemlekadklvg 210
                 e                             +LSgG+k+ va+a      ++k   + llDe  +aLD++  ++v   l+e   n  +  +vi++r +++++adk+v 
  MMETSP1325-20131115|4111_1 493 EhaakmsnahdfimefpkgydtdvggggsgQLSGGQKQRVAIA----RAMIKDPKILLLDEATSALDNNSERIVQAALDELLANhpMTTLVIAHRLTTIRNADKIVV 595
                 0555555555555556666666666666669*******99876....5578888999**********************8766656999**************9985 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.41
                  ------SEEEE--------HH CS
                  xxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14   19 ilpfsksftaivGpNGSGKsn 39  
                  +++  +   a vG+ GSGKs 
  MMETSP1325-20131115|4111_1 1139 TIEAGQ-TVAFVGSSGSGKST 1158
                  444444.56789*******96 PP

  == domain 4    score: 16.8 bits;  conditional E-value: 5.1e-06
                  --TTG-----HHHHH.HHHHHHHHTSS--.....SEEEESSTTTT--HHHHHHHHHHHH..HH-BTBEEEEE-S-HHHHTT-SEEE-- CS
                  xxxxxxxxxxxxxxx.xxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14  132 iskelLSgGektLva.laLlfAiqkvkpa.....plyllDeidaaLDeknvskvaellk..eksknaQfivislreemlekadklvgv 211 
                  i +  + gGe  L a  aLl +i k +p      p+ llDe  +aLD+k  + v   l+   ++k+   +vi++r ++++ adk+v +
  MMETSP1325-20131115|4111_1 1264 IARAIIKGGELGLQArYALLASITKPHPLspxdpPILLLDEATSALDNKSEEVVQAALDdlLAKKKRTTLVIAHRLTTIQSADKIVVL 1351
                  55556678888887724555555555442222339*********************9995546777999**************99865 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.4e-05    0.0072      14      40 ..     393     418 ..     390     423 .. 0.83
   2 !   14.1   0.2   4.2e-05     0.022      15      38 ..    1136    1158 ..    1132    1163 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.4e-05
   PF13555.1  14 ghtveidpkgkntlltGasGsGKSTll 40 
                 + tv+i+ +g++++++GasGsGKST +
  MMETSP1325-20131115|4111_1 393 DLTVTIE-AGTTVAFVGASGSGKSTAV 418
                 5677786.6779*************86 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 4.2e-05
   PF13555.1   15 htveidpkgkntlltGasGsGKST 38  
                   tv+i+ +g++++++G sGsGKST
  MMETSP1325-20131115|4111_1 1136 LTVTIE-AGQTVAFVGSSGSGKST 1158
                  577776.6789************* PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00013     0.066      27      79 ..     392     447 ..     373     492 .. 0.80
   2 !   11.9   0.0   0.00016     0.083      26      59 ..    1133    1167 ..    1109    1234 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00013
                 HHHHHHCTT.SBEEEE-------HHHHHHH--------S-----..---------S CS
  PF03193.11  27 eelaellkd.ktsvlvGqSGvGKSsLinallpeldlkvgevsek..lgrGkhTTta 79 
                 ++l+ +++   t+++vG SG GKS+ ++ ++  +d   ++v ++  +++G+ T   
  MMETSP1325-20131115|4111_1 392 KDLTVTIEAgTTVAFVGASGSGKSTAVQLIERFYDPDNHDVPDQntSKTGRVTLDG 447
                 56667777768999***********9999998887777777543114566666555 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00016
                  -HHHHHHCTT.SBEEEE-------HHHHHHH---- CS
  PF03193.11   26 leelaellkd.ktsvlvGqSGvGKSsLinallpel 59  
                  +++l+ +++  +t+++vG+SG GKS+ ++ ++  +
  MMETSP1325-20131115|4111_1 1133 YTDLTVTIEAgQTVAFVGSSGSGKSTGVQLIERFY 1167
                  56677777777***************887776555 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   7.5e-05     0.039       2      26 ..     404     433 ..     403     506 .. 0.69
   2 !    9.8   0.0    0.0023       1.2       2      32 ..    1146    1188 ..    1145    1253 .. 0.66

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7.5e-05
                 E--B--TT---HHHHHHHHHHS.....TEE CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerl.....glp 26 
                 +a++G++GsGKsT+ +++++ +     ++p
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQLIERFYdpdnhDVP 433
                 799***************998844432233 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0023
                  E--B--TT---HHHHHHHHHHS............TEEEEEGGG CS
   PF13207.1    2 iaitGppGsGKsTlakeLaerl............glpvlsldd 32  
                  +a++G +GsGKsT  +++++ +            +++ l+l+ 
  MMETSP1325-20131115|4111_1 1146 VAFVGSSGSGKSTGVQLIERFYdpekgavlldgvDIKTLDLNW 1188
                  799**********999999988555533333322244444443 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.2   0.00066      0.34      30      88 ..     521     566 ..     499     568 .. 0.76
   2 !   11.5   0.0   0.00035      0.19      20      88 ..    1241    1321 ..    1225    1323 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00066
   PF13558.1  30 tgtlSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEAFsklDeeniasllell 88 
                 +g+lSGG+kq         A+a ++ +       +++++LDEA+s lD+++ + + ++l
  MMETSP1325-20131115|4111_1 521 SGQLSGGQKQ-------RVAIARAMIK------DPKILLLDEATSALDNNSERIVQAAL 566
                 5778888883.......3333344444......489************99887766655 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00035
   PF13558.1   20 dgkekelsrrtgtlSGGEkqflvylala......aAlaalyssaeg.reps......irlvfLDEAFsklDeeniasllell 88  
                  +g ++++    g+lSGG+kq ++ +a a      ++l a y   ++ ++p+      + +++LDEA+s lD+++ + + ++l
  MMETSP1325-20131115|4111_1 1241 EGFDTQVGVGGGKLSGGQKQRVA-IARAiikggeLGLQARYALLASiTKPHplspxdPPILLLDEATSALDNKSEEVVQAAL 1321
                  55555566666777777775332.332212333345555555443333333445555***************9987766665 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00056       0.3       3      25 ..     405     429 ..     403     462 .. 0.73
   2 ?    4.9   0.0     0.038        20     234     271 ..     521     555 ..     476     572 .. 0.86
   3 ?    2.5   0.0       0.2   1.1e+02       3      25 ..    1147    1177 ..    1145    1238 .. 0.74
   4 ?   -0.0   0.0       1.2   6.1e+02     237     272 ..    1254    1311 ..    1251    1335 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00056
   PF13304.1   3 viiGpNgsGKSnlLkaldflfr..d 25 
                 +++G+ gsGKS+  + ++ +++  +
  MMETSP1325-20131115|4111_1 405 AFVGASGSGKSTAVQLIERFYDpdN 429
                 79***************99986541 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.038
   PF13304.1 234 lsdlSdGtkrllalltallsalekgsvlliDEpEngLH 271
                   +lS G+k+  a++ a + ++   ++ll+DE  + L+
  MMETSP1325-20131115|4111_1 521 SGQLSGGQKQRVAIARAMIKDP---KILLLDEATSALD 555
                 5689******************...*******999887 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.2
   PF13304.1    3 viiGpNgsGKSnlLkaldflfr........d 25  
                  +++G  gsGKS+  + ++ +++        d
  MMETSP1325-20131115|4111_1 1147 AFVGSSGSGKSTGVQLIERFYDpekgavllD 1177
                  79**********8888888876554444431 PP

  == domain 4    score: -0.0 bits;  conditional E-value: 1.2
   PF13304.1  237 lSdGtkrllalltallsalekg......................svlliDEpEngLHP 272 
                  lS G+k+  a++ a++   e g                      ++ll+DE  + L+ 
  MMETSP1325-20131115|4111_1 1254 LSGGQKQRVAIARAIIKGGELGlqaryallasitkphplspxdpPILLLDEATSALDN 1311
                  57777777777777777777777777777777777777779999*******9999986 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.1   0.00055      0.29       7     107 ..     404     569 ..     398     586 .. 0.59
   2 ?    6.4   0.0     0.016       8.3       6      30 ..    1145    1169 ..    1140    1228 .. 0.81
   3 ?   -1.2   0.0       3.5   1.8e+03      89     118 ..    1298    1332 ..    1262    1343 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00055
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae...karvvfveapastspkel.lqkllsalglpakg.................................................rltteell.ealqealrrrrt....rlliiDEaqr.L...s....eealeel 107
                 ++++G sG+GK+t+++ + r +d   +  +   ++++ +v++      kel  ++l +++ l   +                                                  + + +l   + q+++ +r++    ++l++DEa   L   s    + al+el
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQLIERFYDPDNHDVPdqnTSKTGRVTLDGVD-LKELdINWLREQIALVGQEpvlfagtigeniargkpgatkeeiehaakmsnahdfimefpkgydtdvgGGGSGQLSgGQKQRVAIARAMikdpKILLLDEATSaLdnnSerivQAALDEL 569
                 6899***************998755444447774444466666555.555555666666555555555555555555555555566665555555555556666666666555553444444445555555555556666677777777755543144455555555 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.016
   PF13401.1    6 ilvvtGesGvGKTtllrrlarqlde 30  
                   ++++G sG+GK+t ++ + r +d 
  MMETSP1325-20131115|4111_1 1145 TVAFVGSSGSGKSTGVQLIERFYDP 1169
                  57899*********99999888754 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 3.5
   PF13401.1   89 rlliiDEaqr.L...s....eealeelrsllddetgvk 118 
                  ++l++DEa   L   s    + al++l  l+  ++ ++
  MMETSP1325-20131115|4111_1 1298 PILLLDEATSaLdnkSeevvQAALDDL--LAK-KKRTT 1332
                  788899998866543232333333333..222.44444 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.017         9      26      43 ..     404     421 ..     393     430 .. 0.87
   2 !   11.6   0.0   0.00031      0.16       8      59 ..    1126    1177 ..    1121    1178 .. 0.78
   3 ?   -1.1   0.0       2.3   1.2e+03     159     214 ..    1306    1357 ..    1292    1366 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.017
  PF01935.12  26 lAilgsTGsGKSntvavL 43 
                 +A +g +GsGKS+ v ++
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQLI 421
                 6779***********987 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00031
  PF01935.12    8 sgsevpvyldlnklvt..rHlAilgsTGsGKSntvavLleellekkgatililD 59  
                  s++e+pvy dl   ++  + +A +gs+GsGKS+ v + +e+ + ++    ++lD
  MMETSP1325-20131115|4111_1 1126 SRKELPVYTDLTVTIEagQTVAFVGSSGSGKSTGVQL-IERFY-DPEKGAVLLD 1177
                  6788999999988876447899*************85.68888.6666666666 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 2.3
  PF01935.12  159 lrklknqairrlldklerllrkggsfsnsstdliallleklekegkitiidlsgvd 214 
                   + l+n++++ ++ +l++ll k++      t +ia+ l  +++  ki+++d + v 
  MMETSP1325-20131115|4111_1 1306 TSALDNKSEEVVQAALDDLLAKKKRT----TLVIAHRLTTIQSADKIVVLDHGDVI 1357
                  56778889999999999999998888....55555555666888888888866655 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00044      0.23      20     103 ..     399     478 ..     392     584 .. 0.59
   2 ?    7.0   0.5     0.012       6.3      20      65 ..    1141    1180 ..    1132    1335 .. 0.54

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00044
   PF13191.1  20 segsplllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrnlpysaiiqa...lrellrqlltelaaelggwreallaalga 103
                  +g+  + ++G+sG+GKS+ ++        er+++   + +  +  + ++ ++ +   l+el  + l+e+ a +g+     +  +g+
  MMETSP1325-20131115|4111_1 399 EAGT-TVAFVGASGSGKSTAVQL------IERFYDPDNHDVPDQNTSKTGRVTLDgvdLKELDINWLREQIALVGQEPVLFAGTIGE 478
                 4555.899*************76......4566666655555555534444444444566666666666555555555444444444 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.012
   PF13191.1   20 segsplllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn 65  
                   +g+  + ++G sG+GKS+ ++      + + +  + g + + + +
  MMETSP1325-20131115|4111_1 1141 EAGQ-TVAFVGSSGSGKSTGVQL-----IERFYDPEKGAVLLDGVD 1180
                  4555.899***********9977.....554444444444444444 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0014      0.73       2      17 ..     404     419 ..     403     433 .. 0.90
   2 !    8.3   0.0    0.0034       1.8       2      17 ..    1146    1161 ..    1145    1185 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0014
   PF13671.1   2 vllvGlpGsGKstlae 17 
                 v +vG++GsGKst ++
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQ 419
                 78***********976 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0034
   PF13671.1    2 vllvGlpGsGKstlae 17  
                  v +vG +GsGKst ++
  MMETSP1325-20131115|4111_1 1146 VAFVGSSGSGKSTGVQ 1161
                  78**********9644 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0045       2.4      17      49 ..     400     432 ..     393     442 .. 0.80
   2 ?    0.0   0.0       0.9   4.7e+02      89     118 ..     537     566 ..     517     570 .. 0.77
   3 ?    5.2   0.0     0.025        13      15      49 ..    1140    1174 ..    1136    1186 .. 0.80
   4 ?   -2.9   0.0       7.2   3.8e+03      96     118 ..    1299    1321 ..    1281    1325 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0045
   PF13604.1  17 gdrvavvqGpAGtGKttvlkalrealeaagkrv 49 
                     ++ +G+ G+GK+t+++ +++ ++ +++ v
  MMETSP1325-20131115|4111_1 400 AGTTVAFVGASGSGKSTAVQLIERFYDPDNHDV 432
                 44455666**************99998877665 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 0.9
   PF13604.1  89 keldaktllvvDEAgmvdtrqlarlleaae 118
                 + +++ ++l++DEA+ +  ++ +r+++aa 
  MMETSP1325-20131115|4111_1 537 AMIKDPKILLLDEATSALDNNSERIVQAAL 566
                 33788889*********9999999999985 PP

  == domain 3    score: 5.2 bits;  conditional E-value: 0.025
   PF13604.1   15 tsgdrvavvqGpAGtGKttvlkalrealeaagkrv 49  
                   +  + ++ +G  G+GK+t ++ +++ ++ +   v
  MMETSP1325-20131115|4111_1 1140 IEAGQTVAFVGSSGSGKSTGVQLIERFYDPEKGAV 1174
                  4455666777*************999998876655 PP

  == domain 4    score: -2.9 bits;  conditional E-value: 7.2
   PF13604.1   96 llvvDEAgmvdtrqlarlleaae 118 
                  +l++DEA+ +  ++ +++++aa 
  MMETSP1325-20131115|4111_1 1299 ILLLDEATSALDNKSEEVVQAAL 1321
                  89999999999999999998875 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0025       1.3      29      50 ..     397     418 ..     372     442 .. 0.82
   2 ?    0.8   0.0      0.47   2.5e+02     140     188 ..     539     582 ..     524     583 .. 0.76
   3 ?    4.8   0.0     0.027        14      30      48 ..    1140    1158 ..    1125    1163 .. 0.89
   4 ?   -1.6   0.0       2.6   1.4e+03     154     188 ..    1305    1337 ..    1296    1338 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0025
   PF13481.1  29 llprgsltllaGapgtGKStla 50 
                  + +g+ ++++Ga+g+GKSt +
  MMETSP1325-20131115|4111_1 397 TIEAGTTVAFVGASGSGKSTAV 418
                 4679****************87 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.47
   PF13481.1 140 legpdlvviDtlsrlvggdensnsdvgaviaalerlakrtgaavllvhH 188
                 +++p+++ +D ++++++  +ns+   + v aal++l  ++ ++ l++ H
  MMETSP1325-20131115|4111_1 539 IKDPKILLLDEATSALD--NNSE---RIVQAALDELLANHPMTTLVIAH 582
                 47899999998888886..3333...47888999999999999999999 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.027
   PF13481.1   30 lprgsltllaGapgtGKSt 48  
                  + +g+ ++++G++g+GKSt
  MMETSP1325-20131115|4111_1 1140 IEAGQTVAFVGSSGSGKST 1158
                  56899*************9 PP

  == domain 4    score: -1.6 bits;  conditional E-value: 2.6
   PF13481.1  154 lvggdensnsdvgaviaalerlakrtgaavllvhH 188 
                  ++++ +n++++v  v aal++l  +++ + l++ H
  MMETSP1325-20131115|4111_1 1305 ATSALDNKSEEV--VQAALDDLLAKKKRTTLVIAH 1337
                  444445666655..778888888888888888888 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0021       1.1       2      51 ..     403     450 ..     402     480 .. 0.64
   2 ?    6.3   0.0     0.013       6.7       2      17 ..    1145    1160 ..    1144    1169 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0021
                 EEEEE-------HHHHHHHHHHHHH-------EEE-SS.-TTSS----TT CS
   PF03205.9   2 ivavvGpkdsGKTtlieklvnklkergyrvavvkhldhGqgeidkpGkDt 51 
                 +va+vG ++sGK+t ++ + ++   ++  v     ++   g +++ G D 
  MMETSP1325-20131115|4111_1 403 TVAFVGASGSGKSTAVQLIERFYDPDNHDVPDQNTSKT--GRVTLDGVDL 450
                 69************998876666666655554444444..4555555555 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.013
                  EEEEE-------HHHH CS
   PF03205.9    2 ivavvGpkdsGKTtli 17  
                  +va+vG ++sGK+t +
  MMETSP1325-20131115|4111_1 1145 TVAFVGSSGSGKSTGV 1160
                  699**********955 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0035       1.8       3      21 ..     403     421 ..     401     435 .. 0.81
   2 ?   -1.1   0.0       1.5     8e+02     246     269 ..     543     569 ..     523     614 .. 0.59
   3 ?    5.5   0.0     0.015       7.6       3      21 ..    1145    1163 ..    1143    1175 .. 0.86
   4 ?   -3.5   0.0       8.2   4.3e+03     168     210 ..    1313    1357 ..    1299    1372 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0035
   PF12846.2   3 ntlilGppGsGKSvllkkl 21 
                 +++++G +GsGKS+++  +
  MMETSP1325-20131115|4111_1 403 TVAFVGASGSGKSTAVQLI 421
                 6799***********9887 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 1.5
   PF12846.2 246 kllviDEahrllgs..peg.adfldel 269
                 k+l++DEa  +l++  + + +++ldel
  MMETSP1325-20131115|4111_1 543 KILLLDEATSALDNnsERIvQAALDEL 569
                 566666666555442233333444443 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.015
   PF12846.2    3 ntlilGppGsGKSvllkkl 21  
                  +++++G +GsGKS+ +  +
  MMETSP1325-20131115|4111_1 1145 TVAFVGSSGSGKSTGVQLI 1163
                  6799*********988765 PP

  == domain 4    score: -3.5 bits;  conditional E-value: 8.2
   PF12846.2  168 aeelal.alerl..ldgalgelFdgpttfdldldariivfdlsglk 210 
                   ee+++ al++l   + + + +++++ t   + d +i+v+d  ++ 
  MMETSP1325-20131115|4111_1 1313 SEEVVQaALDDLlaKKKRTTLVIAHRLTTIQSAD-KIVVLDHGDVI 1357
                  2333333455553222444444555554444444.56666666655 PP

>> PF09818.4  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       5.5   2.9e+03     242     266 ..     398     423 ..     396     427 .. 0.73
   2 !   12.8   0.0   5.6e-05     0.029     300     353 ..     499     554 ..     485     597 .. 0.83
   3 ?    0.3   0.0      0.35   1.8e+02     301     353 ..    1231    1309 ..    1223    1356 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 5.5
   PF09818.4 242 ipkG.itlIvGggyhGKsTLLeAlea 266
                 i+ G  ++ vG+   GKsT ++ +e+
  MMETSP1325-20131115|4111_1 398 IEAGtTVAFVGASGSGKSTAVQLIER 423
                 66673345799999999998888876 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 5.6e-05
   PF09818.4 300 vdispFinnLPegkdtt..efstedASGStsqAanimealeagakllLiDEDtsAt 353
                  +   Fi + P+g+dt       ++ SG  +q ++i++a+    k+lL+DE tsA 
  MMETSP1325-20131115|4111_1 499 SNAHDFIMEFPKGYDTDvgGGGSGQLSGGQKQRVAIARAMIKDPKILLLDEATSAL 554
                 56778***********9666788999****************************95 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.35
   PF09818.4  301 dispFinnLPegkdtt.efstedASGStsqAanimealeag.........................akllLiDEDtsAt 353 
                  +   Fi + Peg dt+     ++ SG  +q ++i++a+  g                          ++lL+DE tsA 
  MMETSP1325-20131115|4111_1 1231 NAYDFIMEQPEGFDTQvGVGGGKLSGGQKQRVAIARAIIKGgelglqaryallasitkphplspxdPPILLLDEATSAL 1309
                  5567999999999999667778999999999999999999989999999999999999999999999999999999995 PP

>> PF01580.13  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0024       1.3      29      56 ..     392     419 ..     377     421 .. 0.77
   2 ?    5.5   0.0     0.017       9.1      40      56 ..    1145    1161 ..    1121    1186 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0024
  PF01580.13  29 kplvadlvkaphlLiaGatgsGKStflr 56 
                 k l++ +   + ++ +Ga+gsGKSt+++
  MMETSP1325-20131115|4111_1 392 KDLTVTIEAGTTVAFVGASGSGKSTAVQ 419
                 555666666678889***********98 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.017
  PF01580.13   40 hlLiaGatgsGKStflr 56  
                   ++ +G++gsGKSt ++
  MMETSP1325-20131115|4111_1 1145 TVAFVGSSGSGKSTGVQ 1161
                  67789*********998 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0034       1.8       1      22 [.     404     424 ..     404     478 .. 0.78
   2 ?    4.4   0.0     0.075        39       1      22 [.    1146    1166 ..    1146    1241 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0034
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl 22 
                 ++++G++G+GK+T+ ++++ r+
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQLIE-RF 424
                 6899************995.44 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.075
   PF13238.1    1 IlitGtpGvGKtTlakeLaerl 22  
                  ++++G +G+GK+T  ++++ r+
  MMETSP1325-20131115|4111_1 1146 VAFVGSSGSGKSTGVQLIE-RF 1166
                  6789*********888884.44 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0041       2.2      61      87 ..     404     430 ..     397     459 .. 0.87
   2 ?    5.0   0.0     0.014       7.2      60      85 ..    1145    1170 ..    1139    1190 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0041
                 EEEEXXXXXXXHHHHHHHHHHHXXXXX CS
  PF00503.15  61 lLlLGqgeSGKsTilkqfkllykpgfs 87 
                 + ++G+++SGKsT ++ +++ y p   
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQLIERFYDPDNH 430
                 6799******************99876 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.014
                  EEEEEXXXXXXXHHHHHHHHHHHXXX CS
  PF00503.15   60 klLlLGqgeSGKsTilkqfkllykpg 85  
                  ++ ++G+++SGKsT ++ +++ y p+
  MMETSP1325-20131115|4111_1 1145 TVAFVGSSGSGKSTGVQLIERFYDPE 1170
                  67899***************999886 PP

>> PF01583.15  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.028        15       2      24 ..     401     423 ..     400     432 .. 0.85
   2 ?    6.7   0.0    0.0086       4.5       2      42 ..    1143    1182 ..    1142    1190 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.028
                 --EEEEE-ETT---HHHHHHHHH CS
  PF01583.15   2 gvvvwltGlsgsGKstiavalek 24 
                 g++v + G sgsGKst  + +e+
  MMETSP1325-20131115|4111_1 401 GTTVAFVGASGSGKSTAVQLIER 423
                 7899************8877775 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0086
                  --EEEEE-ETT---HHHHHHHHHHHHCTS--EEEE---TTT CS
  PF01583.15    2 gvvvwltGlsgsGKstiavalekkLvekgikvylLdGdnvR 42  
                  g +v + G sgsGKst  + +e +  +  + ++lLdG  ++
  MMETSP1325-20131115|4111_1 1143 GQTVAFVGSSGSGKSTGVQLIE-RFYDPEKGAVLLDGVDIK 1182
                  78999***********766666.677788888999998876 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.034        18       3      23 ..     405     425 ..     403     445 .. 0.83
   2 ?   -0.4   0.0       1.4   7.5e+02      58      80 ..     533     556 ..     482     589 .. 0.59
   3 ?    2.9   0.0      0.14        74       3      24 ..    1147    1168 ..    1145    1180 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.034
                 EEE------HHHHHHHGGGGB CS
   PF07728.9   3 lLvGppGtgKselaerlaeal 23 
                   vG++G+gKs+ ++++ +++
  MMETSP1325-20131115|4111_1 405 AFVGASGSGKSTAVQLIERFY 425
                 579*************99987 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 1.4
                 -------.G-SEEEEESGGG---H CS
   PF07728.9  58 plvraar.egeilvlDEveraese 80 
                 ++ ra+  +++il+lDE + a ++
  MMETSP1325-20131115|4111_1 533 AIARAMIkDPKILLLDEATSALDN 556
                 334444449999999999877543 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.14
                  EEE------HHHHHHHGGGGBS CS
   PF07728.9    3 lLvGppGtgKselaerlaealn 24  
                    vG +G+gKs+ ++++ +++ 
  MMETSP1325-20131115|4111_1 1147 AFVGSSGSGKSTGVQLIERFYD 1168
                  579************9999874 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.011       5.7       2      20 ..     404     422 ..     403     463 .. 0.85
   2 ?    2.6   0.0      0.19     1e+02       2      19 ..    1146    1163 ..    1145    1173 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.011
   PF13521.1   2 ivitGgpstGKTtlleaLa 20 
                 ++++G++++GK+t ++ ++
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQLIE 422
                 89***********998776 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.19
   PF13521.1    2 ivitGgpstGKTtlleaL 19  
                  ++++G +++GK+t ++ +
  MMETSP1325-20131115|4111_1 1146 VAFVGSSGSGKSTGVQLI 1163
                  89***********77655 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.031        16       2      20 ..     404     422 ..     403     634 .. 0.79
   2 ?    2.8   0.0      0.19     1e+02       2      14 ..    1146    1158 ..    1145    1172 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.031
                 EEEE--TT---HHHHHHHH CS
  PF01926.18   2 vaivGrpNvGKStLinaLt 20 
                 va+vG + +GKSt +  + 
  MMETSP1325-20131115|4111_1 404 VAFVGASGSGKSTAVQLIE 422
                 89***********877664 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.19
                  EEEE--TT---HH CS
  PF01926.18    2 vaivGrpNvGKSt 14  
                  va+vG + +GKSt
  MMETSP1325-20131115|4111_1 1146 VAFVGSSGSGKST 1158
                  99**********9 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0      0.01       5.4      10      39 ..     391     421 ..     389     423 .. 0.84
   2 ?   -1.8   0.1       5.5   2.9e+03     170     192 ..     708     723 ..     656     737 .. 0.54
   3 ?    3.3   0.0      0.15        80      11      34 ..    1134    1158 ..    1130    1164 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.01
   PF13476.1  10 fkdqeidFskg.ltlItGpNGsGKTTildAi 39 
                 +kd+++  + g  ++++G  GsGK+T  + i
  MMETSP1325-20131115|4111_1 391 YKDLTVTIEAGtTVAFVGASGSGKSTAVQLI 421
                 799999999983569***********87766 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 5.5
   PF13476.1 170 ekellekllqeeekekeleelee 192
                 ek+ le++        +++e +e
  MMETSP1325-20131115|4111_1 708 EKQRLEAE-------TKKKEAKE 723
                 11122211.......11111111 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.15
   PF13476.1   11 kdqeidFskg.ltlItGpNGsGKTT 34  
                   d+++  + g  ++++G  GsGK+T
  MMETSP1325-20131115|4111_1 1134 TDLTVTIEAGqTVAFVGSSGSGKST 1158
                  56666665543789**********9 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.028        15       2      20 ..     403     421 ..     402     424 .. 0.89
   2 ?   -2.1   0.0       4.4   2.3e+03      90     135 ..     547     589 ..     527     595 .. 0.74
   3 ?    2.9   0.1      0.12        64       2      18 ..    1145    1161 ..    1144    1165 .. 0.86
   4 ?   -1.7   0.1       3.1   1.6e+03      90     129 ..    1302    1338 ..    1301    1350 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.028
   PF05729.7   2 tvilqGeaGsGKTtLlqkl 20 
                 tv+ +G++GsGK+t +q +
  MMETSP1325-20131115|4111_1 403 TVAFVGASGSGKSTAVQLI 421
                 7999**********99865 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 4.4
   PF05729.7  90 lDelvsdlgqlkekqpvrtlLselirkkllpeasllltvrpdalrd 135
                 lDe+ s l++ + ++ v+  L el+     p ++l+++ r ++ r+
  MMETSP1325-20131115|4111_1 547 LDEATSALDN-NSERIVQAALDELLAN--HPMTTLVIAHRLTTIRN 589
                 4666666666.6778999999999999..88888888888777665 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.12
   PF05729.7    2 tvilqGeaGsGKTtLlq 18  
                  tv+ +G +GsGK+t +q
  MMETSP1325-20131115|4111_1 1145 TVAFVGSSGSGKSTGVQ 1161
                  8999*********9776 PP

  == domain 4    score: -1.7 bits;  conditional E-value: 3.1
   PF05729.7   90 lDelvsdlgqlkekqpvrtlLselirkkllpeasllltvr 129 
                  lDe+ s l++ k ++ v+  L +l+ k   ++++l+++ r
  MMETSP1325-20131115|4111_1 1302 LDEATSALDN-KSEEVVQAALDDLLAK--KKRTTLVIAHR 1338
                  7999999999.9999999********9..67777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1380 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       616  (0.0450556); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 2.16u 0.34s 00:00:02.50 Elapsed: 00:00:01.08
# Mc/sec: 3062.01
//
Query:       MMETSP1325-20131115|4117_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0056   15.3  19.0     0.0061   15.1  13.2    1.1  1  PF10446.4  Protein of unknown function (DUF2457)
  ------ inclusion threshold ------
      0.011   14.9  18.1      0.012   14.7  12.6    1.1  1  PF05285.7  SDA1
      0.069   11.0  19.7      0.093   10.6  13.7    1.3  1  PF02724.9  CDC45-like protein
       0.29   10.0  10.7       0.37    9.7   7.4    1.2  1  PF01516.11 Orbivirus helicase VP6
       0.33   10.8  16.3       0.42   10.5  11.3    1.2  1  PF11081.3  Protein of unknown function (DUF2890)
       0.41    8.5   7.3       0.48    8.3   5.1    1.3  1  PF05470.7  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
       0.91    8.7  21.0        1.2    8.2  14.6    1.2  1  PF07423.6  Protein of unknown function (DUF1510)
        1.1    7.7   9.0          1    7.7   6.2    1.1  1  PF04499.10 SIT4 phosphatase-associated protein
        1.2    6.8  26.1        1.3    6.6  18.1    1.0  1  PF04147.7  Nop14-like family
        2.1    6.5  21.2        2.4    6.4  14.7    1.1  1  PF03344.10 Daxx Family
        4.2    5.5  20.3        4.5    5.4  14.1    1.0  1  PF10243.4  Microtubule-binding protein MIP-T3
        4.9    6.2  18.7        5.1    6.2  12.9    1.1  1  PF04652.11 Vta1 like
        6.6    5.0   9.1        7.7    4.8   6.3    1.2  1  PF01153.14 Glypican
        6.7    4.8  26.1        8.2    4.5  18.1    1.0  1  PF04006.7  Mpp10 protein
        8.6    4.9  18.9        9.6    4.8  13.1    1.3  1  PF10351.4  Golgi-body localisation protein domain


Domain annotation for each model (and alignments):
>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1  13.2   6.7e-06    0.0061      33     118 ..      13     101 ..       9     171 .. 0.58

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.7e-06
   PF10446.4  33 kkelairklgeeaeeealeeedededdeeddddeDeddddddddeDdedde.lddddstladaseaddG..nktdneagfadSdDeddd 118
                 +k +++r+lg+    + ++  d  + +++ d  e++d +d  d eD  dd+ +d+d+s+ + ++++d G  n+ d+e+  +d    +d+
  MMETSP1325-20131115|4117_1  13 RKPKRVRRLGRSDSSDSEDSSDSSDSEDSSDSGEESDSKDSSDSEDSSDDSsNDEDSSEDSSEDSSDKGnsNENDDEVMVTDTVPPSDT 101
                 68899*****9888776666644333333333344444555555666666644455554444444556611566777766665444554 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7  12.6   1.4e-05     0.012      84     144 ..      30     100 ..       8     161 .. 0.47

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.4e-05
   PF05285.7  84 kkeeeegleseedddeeWdvdsdeededeDeegewvdvesdeeee...ssDsedeeeesee........eee 144
                 +  ++++++se+++d++ ++ds +++++eD++++  ++e++ e+    ssD+ + +e+++e         ++
  MMETSP1325-20131115|4117_1  30 E-DSSDSSDSEDSSDSGEESDSKDSSDSEDSSDDSSNDEDSSEDSsedSSDKGNSNENDDEvmvtdtvpPSD 100
                 1.1111122222222222222223333333322222222222222000222222222222244444444222 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6  13.7    0.0001     0.093     124     187 ..      25      99 ..       3     149 .. 0.49

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.0001
   PF02724.9 124 lvemkeeee..eesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsnessl............a 187
                  ++++e  +  ++sd++++s++ ee++++++s++++s++d+++++d++ ed++e++  + n++++            +
  MMETSP1325-20131115|4117_1  25 DSSDSE--DssDSSDSEDSSDSGEESDSKDSSDSEDSSDDSSNDEDSS-EDSSEDSSDKGNSNENddevmvtdtvppS 99 
                 222222..1234444444445555555555555444444443333333.33333333333333334666776654431 PP

>> PF01516.11  Orbivirus helicase VP6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   7.4    0.0004      0.37      30     129 ..      42     143 ..      19     154 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0004
  PF01516.11  30 seeekeeepkeedeaeerlsdG..eGeqkkkGkkeesdketkdadvdrrlatevGsgssakgsgeradkdadrGdgkvrGGgGdadkgagatGtegGgvvvl 129
                 s+++ e ++k+ +++e++  d   + + +++  +++sdk   +++ d ++ t+    s ++ s er   ++d  +   +  +  +   +++ G++  gv  l
  MMETSP1325-20131115|4117_1  42 SDSGEESDSKDSSDSEDSSDDSsnDEDSSEDSSEDSSDKGNSNENDDEVMVTDTVPPSDTRNSAERPWSESDYAEFYSEFQSPSSRSRSARMGASATGVAPL 143
                 4455666889988888884433113455677888999***************9999***********99999998888888888888888888887776655 PP

>> PF11081.3  Protein of unknown function (DUF2890)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5  11.3   0.00046      0.42      15      99 ..      24     115 ..       7     166 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00046
   PF11081.3  15 pptedeeEdwd.sqaeevseeeeeledw.....edSldeedeeaeeveeetaak.skapssssksssqetksapprpaarrpsrRWdetgra 99 
                 +   d e+  d s++e+ s+  ee +++     edS d++ ++++  e+ + ++ +k +s+++ ++ + t ++pp+ ++  ++r W e   a
  MMETSP1325-20131115|4117_1  24 SDSSDSEDSSDsSDSEDSSDSGEESDSKdssdsEDSSDDSSNDEDSSEDSSEDSsDKGNSNENDDEVMVTDTVPPSDTRNSAERPWSESDYA 115
                 33446677777566666665555555443445566666554444444444444456777777888889999*******9999999*987543 PP

>> PF05470.7  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.1   0.00053      0.48     124     194 ..      25      92 ..       4     162 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00053
   PF05470.7 124 feddikkyredPeseeeeeeedededdegedeedeeedsvkkteevkkssesklkeekeeeedeeeeeekl 194
                   +d ++  ++ +se+  ++ +e ++++ +d+ed+++ds+++ ++   s++s  +++ + +++e+++e+++
  MMETSP1325-20131115|4117_1  25 DSSDSEDSSDSSDSEDSSDSGEESDSKDSSDSEDSSDDSSNDEDS---SEDSSEDSSDKGNSNENDDEVMV 92 
                 333333333333333333333333333333333333333333332...33333333333333333333332 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  14.6    0.0014       1.2      44     110 ..      25      89 ..       5     116 .. 0.56

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0014
   PF07423.6  44 asadeeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkeeeseede 110
                 +s+d+e+++ s+d e+ ++  +++++k+++++ed++dds+++++++e ++e++  ++k ++++++de
  MMETSP1325-20131115|4117_1  25 DSSDSEDSSDSSDSEDSSDSGEESDSKDSSDSEDSSDDSSNDEDSSEDSSEDS--SDKGNSNENDDE 89 
                 44556666666666666666666666777777777663333333333333333..333333222222 PP

>> PF04499.10  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   6.2    0.0011         1     266     326 ..      25      89 ..       3     154 .. 0.57

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0011
  PF04499.10 266 eeeseeeaedtsadae...qdsaedkreleasnasedseeededdeeseeseesees.aaeltee 326
                 + +++e+ +d+s ++    +++++d+++ ++s++s+d++++ded++e+ ++++s++  ++e+ +e
  MMETSP1325-20131115|4117_1  25 DSSDSEDSSDSSDSEDssdSGEESDSKDSSDSEDSSDDSSNDEDSSEDSSEDSSDKGnSNENDDE 89 
                 22222222222222222123333334444444444443333333333333333333323333333 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  18.1    0.0015       1.3     301     400 ..      27      89 ..       4     133 .. 0.36

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0015
   PF04147.7 301 ddeeeedsekesaddlddefeedddenfglgsaeeeeeeeeeegvededeeeddddeeeeeedvdedeeeedeedeesddeeeeeeeeeaseeeaeakkk 400
                 +d+e++                                    ++ ++ed+++++++  ++++d++++e+++d++++++d+ e+++e+++ + +++e++++
  MMETSP1325-20131115|4117_1  27 SDSEDSS-----------------------------------DSSDSEDSSDSGEE--SDSKDSSDSEDSSDDSSNDEDSSEDSSEDSSDKGNSNENDDE 89 
                 1111111...................................11111111111111..111122121222222222222222222221111111111111 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  14.7    0.0026       2.4     406     491 ..      17      93 ..       2     141 .. 0.38

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0026
  PF03344.10 406 rqerkrrgkesrskdkslassestesPllasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleasse 491
                 r  r +r+ +s s+d+   ss+s++s   +++es++++++++e+  +d +++ ed+se++ e+       +++ n +e+d e +  
  MMETSP1325-20131115|4117_1  17 RVRRLGRSDSSDSEDS-SDSSDSEDSS-DSGEESDSKDSSDSEDSSDDSSND-EDSSEDSSED------SSDKGNSNENDDEVMVT 93 
                 2222222222221111.1112222221.233333333333333322222222.1111111111......11111222222222222 PP

>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  14.1    0.0049       4.5     194     323 ..      13     135 ..       1     164 [. 0.48

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0049
   PF10243.4 194 ekekkkeksrksekgkeeerskdeerekeedkgkdretnrakeeeeesrksseksrrssksekkae..seveaskseekktekeskaeaeqeakakasksktkktnskeevqrertslrrpsarpasARpap 323
                  k k   + ++s++++ e+ s++ + e+ +d g++++++ +  +e++s+    +s ++++se  +e  s++++s+++ ++  ++ ++ ++  +++   ++      s+ + ++  +  + ps r  sAR ++
  MMETSP1325-20131115|4117_1  13 RKPKRVRRLGRSDSSDSEDSSDSSDSEDSSDSGEESDSKDSSDSEDSSDD---SSNDEDSSEDSSEdsSDKGNSNENDDEVMVTDTVPPSDTRNSA--ER----PWSESDYAEFYSEFQSPSSRSRSARMGA 135
                 22223333445566666666666666666666666666644444443333...3333333333333002333333333333333333333222222..22....2333344444444455555555555444 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  12.9    0.0056       5.1     197     289 ..      23     110 ..       1     169 [. 0.33

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0056
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........................... CS
  PF04652.11 197 aeesseslpsdplsaedsdssapgldadeasaspseapssspgvpsfpspdeseasnkdsqlPsaPtyaqknssssqsvfPpsseeeetssss 289
                  ++ss+s+ s+     ds++s +++d++e+s s+++++s++ + +s+  +d+se+s++ds++ +  ++ + +   +++v+P+  +++ +++ s
  MMETSP1325-20131115|4117_1  23 RSDSSDSEDSS-----DSSDSEDSSDSGEESDSKDSSDSEDSSDDSSNDEDSSEDSSEDSSDKGNSNENDDEVMVTDTVPPSDTRNSAERPWS 110
                 22222222222.....22222222222222222222222222222221111112222222222222111111112222222222222222222 PP

>> PF01153.14  Glypican
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   6.3    0.0084       7.7     467     532 ..      20      84 ..      15     132 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0084
  PF01153.14 467 rlkaaesGddedeqdaedessGvsGsGsgcedkrlkilaesekdlskeeeakekqeatakdsrksg 532
                 rl+   s+d ed +d++d+ +  s sG+ +++k  +  ++s++d s++e ++e+ ++ + d+++s+
  MMETSP1325-20131115|4117_1  20 RLGRSDSSDSEDSSDSSDSEDS-SDSGEESDSKDSSDSEDSSDDSSNDEDSSEDSSEDSSDKGNSN 84 
                 6777889999999999998888.99****9999888888888888887777766664444433322 PP

>> PF04006.7  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  18.1     0.009       8.2      87     177 ..      14     104 ..       3     113 .. 0.64

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.009
   PF04006.7  87 neeeisklseledeeseedgsdeseedeedeaddeeeeeelEeeemldeadleeveesseeelsdeeeeddeeekmeeeaee..saeqke.rek 177
                 ++++++ l  ++ + ++ed sd s+ ++ +++++e++ ++  + e  d+ d ++ +e+s e+ s+++  +++ ++ ++e  +  ++++ + r++
  MMETSP1325-20131115|4117_1  14 KPKRVRRLGRSD-SSDSEDSSDSSDSEDSSDSGEESDSKDSSDSE--DSSDDSSNDEDSSEDSSEDSSDKGNSNENDDEVMVtdTVPPSDtRNS 104
                 566777777766.78889999999999999999999988866666..56666666666666555555444444444433333355555554555 PP

>> PF10351.4  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  13.1     0.011       9.6     305     370 ..      25      88 ..       3     147 .. 0.61

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.011
   PF10351.4 305 edsdsqdeeeesasslsstsgskrskdssesrsssssssksslssqsskssdkskskrkelkksks 370
                 ++sds+d ++  +s+++++s s +++ds++s++s++ss++ss+++ ss+ s++++s++ +++++ +
  MMETSP1325-20131115|4117_1  25 DSSDSEDSSD--SSDSEDSSDSGEESDSKDSSDSEDSSDDSSNDEDSSEDSSEDSSDKGNSNENDD 88 
                 3333333333..222333333322333322445555555555555555555555554444443322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       811  (0.0593183); expected 273.4 (0.02)
Passed bias filter:                      395  (0.0288912); expected 273.4 (0.02)
Passed Vit filter:                       136  (0.00994734); expected 13.7 (0.001)
Passed Fwd filter:                        65  (0.00475424); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.05u 0.38s 00:00:01.43 Elapsed: 00:00:00.60
# Mc/sec: 698.94
//
Query:       MMETSP1325-20131115|4118_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 571.05
//
Query:       MMETSP1325-20131115|4119_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        93  (0.00680222); expected 273.4 (0.02)
Passed bias filter:                       72  (0.00526624); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.64
# Mc/sec: 314.52
//
Query:       MMETSP1325-20131115|4122_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 454.82
//
Query:       MMETSP1325-20131115|4116_1  [L=697]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   13.9   0.8      0.044   13.0   0.5    1.4  1  PF05372.6 Delta lysin family


Domain annotation for each model (and alignments):
>> PF05372.6  Delta lysin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.5   3.2e-06     0.044       3      12 ..     449     458 ..     448     458 .. 0.96

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.2e-06
   PF05372.6   3 aDIISTIgdf 12 
                 aDIISTI+df
  MMETSP1325-20131115|4116_1 449 ADIISTISDF 458
                 8********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.00u 0.34s 00:00:01.34 Elapsed: 00:00:00.64
# Mc/sec: 2609.78
//
Query:       MMETSP1325-20131115|4120_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 1046.57
//
Query:       MMETSP1325-20131115|4124_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   11.7   0.4       0.16   11.0   0.1    1.5  1  PF14268.1 YoaP-like


Domain annotation for each model (and alignments):
>> PF14268.1  YoaP-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   1.2e-05      0.16      21      34 ..       5      18 ..       1      20 [. 0.87

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.2e-05
   PF14268.1 21 ttyalFynGkFvTv 34
                tt++++ nG + T+
  MMETSP1325-20131115|4124_1  5 TTWSVYANGAYPTQ 18
                9*********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 284.85
//
Query:       MMETSP1325-20131115|4125_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 169.15
//
Query:       MMETSP1325-20131115|4123_1  [L=390]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.36s 00:00:01.03 Elapsed: 00:00:00.50
# Mc/sec: 1869.16
//
Query:       MMETSP1325-20131115|4126_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1002.56
//
Query:       MMETSP1325-20131115|4127_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.4   0.2      0.062   12.9   0.1    1.2  1  PF00746.16 Gram positive anchor


Domain annotation for each model (and alignments):
>> PF00746.16  Gram positive anchor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   4.6e-06     0.062      15      39 .]      80     104 ..      76     104 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.6e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF00746.16  15 asnifltlaGlllaaggglllvkrr 39 
                 ++++++++ G+++++ g+ +lv rr
  MMETSP1325-20131115|4127_1  80 NAMPAFMAGGAVVLVVGAAALVVRR 104
                 889********66666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.43s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 545.05
//
Query:       MMETSP1325-20131115|4128_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 891.44
//
Query:       MMETSP1325-20131115|4129_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-21   76.0   0.0    3.3e-21   75.7   0.0    1.1  1  PF02543.10 Carbamoyltransferase
  ------ inclusion threshold ------
       0.02   14.0   0.0      0.049   12.7   0.0    1.7  1  PF01300.13 Telomere recombination


Domain annotation for each model (and alignments):
>> PF02543.10  Carbamoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.7   0.0   4.8e-25   3.3e-21     295     360 .]       2      69 ..       1      69 [. 0.96

  Alignments for each domain:
  == domain 1    score: 75.7 bits;  conditional E-value: 4.8e-25
  PF02543.10 295 mkdrlNekvkResfrPfaPsvleerapeifeldeespyMlivvkvreekrd..klpavvHvDgtaRvQ 360
                 mk+rlN+ + Re++rP+aP+vl+e+a +if+ +  spyM ++  vr+e r+   lpav+H Dg+aR+Q
  MMETSP1325-20131115|4129_1   2 MKERLNKLKSREWYRPVAPMVLAEDAAKIFDGACTSPYMSVSCTVRAEVREsgALPAVTHYDGSARPQ 69 
                 9***********************************************987346*************9 PP

>> PF01300.13  Telomere recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   7.2e-06     0.049     107     149 ..      76     123 ..       2     138 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 7.2e-06
  PF01300.13 107 hplarlLlealgep.....lvaTSanlsgepsltdaeeveeelgekvd 149
                  p+++++l a+ +      ++ TS n +g+p++ +aee+ + l + ++
  MMETSP1325-20131115|4129_1  76 EPFIHAMLMAVRAKsghgvVINTSFNTKGRPIVNRAEEALAMLVNDME 123
                 67778888777655677889*********************9977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 723.80
//
Query:       MMETSP1325-20131115|4130_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1492.73
//
Query:       MMETSP1325-20131115|4131_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.7    8.5   6.9        1.7    8.4   0.2    3.1  3  PF13424.1 Tetratricopeptide repeat
        2.5    8.0   7.2         16    5.4   0.1    3.8  3  PF13176.1 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   1.7    0.0056        38      64      75 ..      70      81 ..      11      84 .. 0.70
   2 ?    8.4   0.2   0.00025       1.7      21      44 ..      68      92 ..      57      96 .. 0.74
   3 ?    1.8   0.1     0.029     2e+02      26      40 ..     146     160 ..     122     170 .. 0.70

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0056
   PF13424.1 64 eAleylekAlei 75
                eA++++++Al++
  MMETSP1325-20131115|4131_1 70 EAEQLYRQALAV 81
                555555555554 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00025
   PF13424.1 21 ydeAlelyekalel.lrelgddhpd 44
                + eA++ly++al++ ++ +g   ++
  MMETSP1325-20131115|4131_1 68 LIEAEQLYRQALAVeQKAHGGGTAE 92
                5799999999999966666654444 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.029
   PF13424.1  26 elyekalellrelgd 40 
                 elye+a +l+ + g+
  MMETSP1325-20131115|4131_1 146 ELYEEAAQLYGLIGE 160
                 455555555554444 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.033   2.2e+02      16      27 ..      21      30 ..      10      44 .. 0.82
   2 ?    5.4   0.1    0.0023        16      17      30 ..      70      83 ..      70      88 .. 0.83
   3 ?    2.0   0.4     0.028   1.9e+02      12      23 ..     145     156 ..     123     167 .. 0.79

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.033
   PF13176.1 16 ekAielyeraLa 27
                 +A+el+er  a
  MMETSP1325-20131115|4131_1 21 ARAAELFER--A 30
                69******9..4 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0023
   PF13176.1 17 kAielyeraLaltk 30
                +A++ly++aLa+++
  MMETSP1325-20131115|4131_1 70 EAEQLYRQALAVEQ 83
                79******887764 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.028
   PF13176.1  12 lgdyekAielye 23 
                 +  ye+A++ly 
  MMETSP1325-20131115|4131_1 145 RELYEEAAQLYG 156
                 556899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 948.35
//
Query:       MMETSP1325-20131115|4132_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.43s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 373.28
//
Query:       MMETSP1325-20131115|4136_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.037   13.4   0.0      0.037   13.4   0.0    1.2  1  PF00561.15 alpha/beta hydrolase fold
      0.061   13.8   0.0      0.079   13.4   0.0    1.1  1  PF03037.11 Kinetoplastid membrane protein 11


Domain annotation for each model (and alignments):
>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   5.4e-06     0.037      49      75 ..       2      28 ..       1      98 [. 0.77

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 5.4e-06
                EE-B---HHHHHHHHHCGGGEEEEEEE CS
  PF00561.15 49 vGhSmGGmialayaaeypdrvkamvll 75
                +G S+GG++ l+y++ +p++  ++ + 
  MMETSP1325-20131115|4136_1  2 LGQSYGGFCILTYLSLFPESLERCLFT 28
                8******************66655544 PP

>> PF03037.11  Kinetoplastid membrane protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.2e-05     0.079       8      47 ..      34      73 ..      28      81 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.2e-05
  PF03037.11  8 faakldrldeefakkmeeqnkkffadkpdestlspemkeh 47
                 a k+d + +   k+m e+nk+f++  p++ +   ++ +h
  MMETSP1325-20131115|4136_1 34 VARKVDEVYQATYKRMAERNKRFYSRYPEDVATVRDIVKH 73
                5779999999999***************997766665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 589.10
//
Query:       MMETSP1325-20131115|4134_1  [L=393]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-67  227.9   0.0    1.4e-67  227.6   0.0    1.0  1  PF00648.16 Calpain family cysteine protease


Domain annotation for each model (and alignments):
>> PF00648.16  Calpain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.6   0.0     1e-71   1.4e-67       1     297 [.      28     334 ..      28     335 .. 0.86

  Alignments for each domain:
  == domain 1    score: 227.6 bits;  conditional E-value: 1e-71
                 ----TTS-SSGGG---TT---......---EEE-HHHHSSS-.BS------GGGEB------HHHHHHHHHHTTSHHHHHHHS-SS--SSTT----EEEEEE----EEEEEE-S-EEE----.BSSSBE----B-HHHHHHHHHHHH---GGGG----TTHHHCTT----EEEEETTS--T..THHH..HHHHHHH---...BB--B---SSGG....GTT-BTTTS-BSS---EE---EEEEB---EEEEEEEE------------STTSGGGGGS-HHHHHHH.TTSS-.---EEEEHHHHHHH-CEEEEE-S CS
  PF00648.16   1 lfedpefPaaekslgykeksp......rkieWkrPteiaedp.kfivgGasrtdicqGalGdcWllaaiasltlneellkrvvpkdqslkenyaGifhfrlwryGeWvdvvvddllPtkdge.lvfvksaerkefWsallekayaklnGsyealkgGsttealedltGgvaeslelkkapsednlak..ilaklleras...llgasidtssav....deeaktakglvkghaysvtgvkevelkgekvklirlrnPWGeveWkGaWsdesseWsevdeeekael.qlkveedGefWmsfedflrefsrleicnl 297
                 lf dp+fP+ e+sl+ k+ s       + i+++rP + ++ p   ++gG +  di qG l dcW+l+a++++++  +l++++  ++     + aG++++r+++ G+W +v vdd +P+  g    +++ ++ +e+W+ llekayak++Gsy+++k G + ea+ dltG+   s+ +++ + ++++++  ++++l++  +   ++++s+   +++    d+  k   glv ghay+++ +ke +     +kl+ lrnPWG+ eW+G+Wsd+s+ W+   +    e+  +  e+dG+fWm f+d++ +f  +++c +
  MMETSP1325-20131115|4134_1  28 LFLDPDFPPIETSLYKKDPSGevlsdgQPITFRRPRDFMDGPyDVFLGGIEPNDIRQGMLTDCWFLCALSAIAEFPNLVQKLFCEESHHVSE-AGVYKLRICKNGQWQTVTVDDYFPCWPGGgPSYSR-SHGNELWVLLLEKAYAKVHGSYATIKMGWAYEAMLDLTGAPYASIRFEDPDVQEKFKTgaLWEELVHWDEegyVMSCSTPGEDVFtetgDKPLKDGSGLVAGHAYTLLTAKETSD---GHKLVCLRNPWGNFEWQGDWSDHSDLWT---PAIMVEVgAEPAEDDGKFWMCFDDVMAHFFSINVCMV 334
                 89************999888789999999**********99945899***********************************9666555555.*************************6655278888.799*******************************************9998886666555588888765545558999988776641111333456689**********9999765...799************************9...444444415567889********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.41s 00:00:01.03 Elapsed: 00:00:00.49
# Mc/sec: 1921.98
//
Query:       MMETSP1325-20131115|4133_1  [L=430]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-39  132.4   0.0      2e-38  131.3   0.0    1.6  2  PF03986.8  Autophagocytosis associated protein (Atg3), N-terminal domain
    2.1e-27   94.9   1.1    3.9e-27   94.1   0.8    1.5  1  PF03987.10 Autophagocytosis associated protein, active-site domain
    8.7e-15   53.4   3.3    1.5e-14   52.6   2.3    1.4  1  PF10381.4  Autophagocytosis associated protein C-terminal


Domain annotation for each model (and alignments):
>> PF03986.8  Autophagocytosis associated protein (Atg3), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.3   0.0   4.3e-42     2e-38       5     107 ..       9     116 ..       5     151 .. 0.92
   2 ?   -4.1   0.1       2.4   1.1e+04      45      56 ..     407     418 ..     399     421 .. 0.74

  Alignments for each domain:
  == domain 1    score: 131.3 bits;  conditional E-value: 4.3e-42
   PF03986.8   5 klssvreyltPvlkeSkFketGeitpeEFvaAGDyLvykfptWsWaagdeskaksyLPkdKqfLvtrnvpcyrRakqveaeeeeeeiveeeee.....ddgwvkthkk 107
                  l + re  tPvl++S+F e G++tp+EFvaAGD+Lvy++ptWsWa+g++sk+k++LP+dKq+Lvtr+vpc  R+++++++  +++ v++ ++     d+gw++t+ +
  MMETSP1325-20131115|4133_1   9 MLRNAREWATPVLQNSAFLERGVLTPDEFVAAGDQLVYRCPTWSWASGEPSKRKPHLPADKQYLVTRGVPCRSRVSSLANTFIDDTEVNSGDGgdgggDEGWLATNVV 116
                 567899***************************************************************************88888888887778999******9876 PP

  == domain 2    score: -4.1 bits;  conditional E-value: 2.4
   PF03986.8  45 ptWsWaagdesk 56 
                  +W W++g +++
  MMETSP1325-20131115|4133_1 407 ASWYWTTGASRR 418
                 479999877654 PP

>> PF03987.10  Autophagocytosis associated protein, active-site domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.1   0.8   8.5e-31   3.9e-27       1      62 []     288     349 ..     288     349 .. 0.99

  Alignments for each domain:
  == domain 1    score: 94.1 bits;  conditional E-value: 8.5e-31
  PF03987.10   1 yItYdkyYqvPrLylrgydengkplspeeifedvssdyaqktvtleehPvlgvpwysiHPCk 62 
                 +ItYdkyYq+Pr +l+gy e g+plspe++fed+++dyaq+tvt+++hP+l++p +s+HPCk
  MMETSP1325-20131115|4133_1 288 SITYDKYYQTPRVWLFGYSELGSPLSPEQTFEDIIQDYAQRTVTIDPHPHLNEPHASVHPCK 349
                 59***********************************************************8 PP

>> PF10381.4  Autophagocytosis associated protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   2.3   3.2e-18   1.5e-14       2      25 .]     371     394 ..     370     394 .. 0.98

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 3.2e-18
   PF10381.4   2 dqyLfIFLKFiaSViPTIEyDyTt 25 
                 dqy+fIFLKFi SV+PTIEyDyT+
  MMETSP1325-20131115|4133_1 371 DQYIFIFLKFIGSVVPTIEYDYTM 394
                 9**********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.50
# Mc/sec: 2060.87
//
Query:       MMETSP1325-20131115|4138_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-74  248.7   0.4    7.5e-74  248.5   0.3    1.0  1  PF01208.12 Uroporphyrinogen decarboxylase (URO-D)
    0.00085   19.0   0.4      0.038   13.7   0.0    3.0  3  PF02310.14 B12 binding domain


Domain annotation for each model (and alignments):
>> PF01208.12  Uroporphyrinogen decarboxylase (URO-D)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.5   0.3   1.1e-77   7.5e-74      53     342 ..       1     306 [.       1     307 [. 0.94

  Alignments for each domain:
  == domain 1    score: 248.5 bits;  conditional E-value: 1.1e-77
  PF01208.12  53 aevtlqpverfglDaailfsdilveaealGlevefeegegPsvekpirtaedve.klevpddvelgrlpyvleavrllrkel...gdevpligfvgaPftlasylveGg...gfeklkkllykdpeevhalldkltevvieylkaqieaGadaiqifDswagllspedfeefvlpylkkivdevkaegpe.pvilficgattpiledlaetgadvlslDwtvdleeaar..........evgdkialqGNldpialLl....gspeeieaevkeilekgagekkgyilnlGhgippgtppenvkalveavke 342
                 aevt+qp++r++lDaailfsdilv+ ea+G++v+++ g+g +v++p+ +a++ve +l++  dv+ + l +v+e+v+l+rk+l   +++vpligf+ aP+tl++y+v G+   + e   k+l ++p e ++lld+lt +viey++aq+eaGa+++q+f++++  +s+  fe++++p++ ki++e+k+++p+ p+ +f++ga     ++l+e+g+dv+ +D  +d  ++ r            +  +a+qGNldp a+L     +++ +++a+++++le+ +g ++  i+nlG g++ + +p  vk lv+ ++e
  MMETSP1325-20131115|4138_1   1 AEVTMQPIRRYDLDAAILFSDILVIVEAFGMDVTMPGGVGIQVPEPLASAAEVEsRLPKTVDVKVE-LAHVIESVKLIRKALvaeDRDVPLIGFSAAPWTLMYYMVGGSskkNQEVGEKWLNEHPVESQELLDRLTATVIEYMSAQVEAGAHMLQVFEAMGMWISRPAFEKWAMPCMVKIAAELKKRHPDvPLLVFPRGAC-YANAALQEAGYDVVTMDCATDA-KSTRamleelaaasGASPACAIQGNLDP-AILRpsagSDQSKVKAAARQLLED-VG-TQALIANLGEGLLGNEDPVLVKTLVDEIHE 306
                 79***************************************************999*999998645.*************9998888*******************777*******************************************************************************************9.8999999*************99.66666999999998444678********.8998764345778**********4.55.99**************************98 PP

>> PF02310.14  B12 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       0.1   7.2e+02      41      59 ..      75      95 ..      22     106 .. 0.67
   2 ?    2.8   0.0     0.013        90      63      86 ..     171     194 ..     167     194 .. 0.91
   3 !   13.7   0.0   5.5e-06     0.038       9      44 ..     191     233 ..     189     244 .. 0.76

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.1
  PF02310.14 41 edivealaaeepdv..vglSa 59
                + i +al ae+ dv  +g+Sa
  MMETSP1325-20131115|4138_1 75 KLIRKALVAEDRDVplIGFSA 95
                445557777777777788887 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.013
  PF02310.14  63 ssleaakelaraakrvrprvkvvv 86 
                 + ++++ ++a ++k+++p+v+++v
  MMETSP1325-20131115|4138_1 171 WAMPCMVKIAAELKKRHPDVPLLV 194
                 7899****************9986 PP

  == domain 3    score: 13.7 bits;  conditional E-value: 5.5e-06
  PF02310.14   9 ggdvhplGlayvaaalraaGfeveildanven.......ediv 44 
                 +  v p G+ y  aal++aG++v  +d+ +++       e+++
  MMETSP1325-20131115|4138_1 191 PLLVFPRGACYANAALQEAGYDVVTMDCATDAkstramlEELA 233
                 556889***********************99955543333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.33s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 1480.10
//
Query:       MMETSP1325-20131115|4140_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00026   21.0   1.4       0.24   11.5   0.1    2.5  2  PF10629.4 Protein of unknown function (DUF2475)


Domain annotation for each model (and alignments):
>> PF10629.4  Protein of unknown function (DUF2475)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.1    0.0002       2.7       3      15 ..     111     123 ..     109     125 .. 0.87
   2 !   11.5   0.1   1.8e-05      0.24       2      14 ..     150     162 ..     149     165 .. 0.88

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0002
   PF10629.4   3 gliPGYaGyvPql 15 
                 ++iPG++G++P +
  MMETSP1325-20131115|4140_1 111 YHIPGFSGHIPVA 123
                 79*********75 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 1.8e-05
   PF10629.4   2 pgliPGYaGyvPq 14 
                  +++PGY+G+ P+
  MMETSP1325-20131115|4140_1 150 RHNMPGYTGFKPT 162
                 599*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 929.20
//
Query:       MMETSP1325-20131115|4142_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.33s 00:00:00.61 Elapsed: 00:00:00.44
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|4143_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 529.20
//
Query:       MMETSP1325-20131115|4144_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   21.2   0.0     0.0004   20.5   0.0    1.3  1  PF12796.2  Ankyrin repeats (3 copies)
  ------ inclusion threshold ------
      0.021   14.8   0.0        5.5    7.4   0.0    2.5  2  PF13606.1  Ankyrin repeat
      0.087   12.5   0.0       0.45   10.3   0.0    2.2  2  PF00023.25 Ankyrin repeat
       0.11   12.6   0.0       0.47   10.6   0.0    2.0  2  PF13857.1  Ankyrin repeats (many copies)
       0.12   12.8   0.0        1.2    9.6   0.0    2.2  2  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   1.5e-07    0.0004      22      83 ..       7      89 ..       3     100 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 1.5e-07
   PF12796.2 22 dvdl.getpLh.lAaeagnleivklLle...................agadvnakd......kegntpLhlAvrnghlelvklLlekga 83
                dvd+  et+L  +A++++   +v++L++                   +      +        e+ ++Lh+A+++++l +v + le+ +
  MMETSP1325-20131115|4144_1  7 DVDTdCETALLdHAVRQQMRGAVEFLVDecgvapepsiktvqmatcnR------EVtksvctIEKFSALHIAIETRDLNMVAYVLESSS 89
                55556677554499**************99999999999996654431......22334556799999***************999854 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.014        38       5      23 ..      16      34 ..      13      41 .. 0.78
   2 ?    7.4   0.0     0.002       5.5       4      24 ..      67      87 ..      64      91 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.014
   PF13606.1  5 pLhlAasngrielveaLle 23
                +L++A++++   +ve+L++
  MMETSP1325-20131115|4144_1 16 LLDHAVRQQMRGAVEFLVD 34
                368******99******96 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.002
   PF13606.1  4 TpLhlAasngrielveaLlen 24
                ++Lh+A++ + +++v + le+
  MMETSP1325-20131115|4144_1 67 SALHIAIETRDLNMVAYVLES 87
                89**************99985 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.57   1.6e+03       7      25 ..      18      37 ..      14      40 .. 0.72
   2 ?   10.3   0.0   0.00016      0.45       3      23 ..      66      86 ..      64      99 .. 0.86

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.57
                HHHHHTTHHHHHHHHHH.TT CS
  PF00023.25  7 HlAalrgnlevvklLls.qG 25
                  A++      v++L++ +G
  MMETSP1325-20131115|4144_1 18 DHAVRQQMRGAVEFLVDeCG 37
                56777777778899988666 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00016
                CBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25  3 fTPLHlAalrgnlevvklLls 23
                f++LH+A++  +l++v + l+
  MMETSP1325-20131115|4144_1 66 FSALHIAIETRDLNMVAYVLE 86
                89**************99887 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.91   2.5e+03      18      25 ..      15      22 ..       4      39 .. 0.54
   2 ?   10.6   0.0   0.00017      0.47      16      49 ..      65      94 ..      58     100 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.91
   PF13857.1 18 tpLhlAak 25
                 +L  A++
  MMETSP1325-20131115|4144_1 15 ALLDHAVR 22
                34444444 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00017
   PF13857.1 16 gntpLhlAakggalevvrlLlapgadlnlrdsdg 49
                ++++Lh+A++  +l++v + l        ++++g
  MMETSP1325-20131115|4144_1 65 KFSALHIAIETRDLNMVAYVL----ESSSKNEQG 94
                569**************9999....666666666 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       0.3   8.3e+02      34      53 ..      12      32 ..       6      34 .. 0.66
   2 ?    9.6   0.0   0.00043       1.2      33      52 ..      64      83 ..      56      98 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.3
   PF13637.1 34 Gnt.aLhiAalrgnieilklL 53
                ++t +L+ A++ +   ++++L
  MMETSP1325-20131115|4144_1 12 CETaLLDHAVRQQMRGAVEFL 32
                444477888877777777777 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00043
   PF13637.1 33 sGntaLhiAalrgnieilkl 52
                + ++aLhiA+++ +++++ +
  MMETSP1325-20131115|4144_1 64 EKFSALHIAIETRDLNMVAY 83
                56788888888888888866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 753.85
//
Query:       MMETSP1325-20131115|4141_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.5   1.6       0.17   11.3   0.2    2.7  2  PF09574.5 Protein  of unknown function (Duf2374)
       0.17   11.6   0.9         23    4.8   0.0    2.7  2  PF10660.4 Iron-containing outer mitochondrial membrane protein N-terminus


Domain annotation for each model (and alignments):
>> PF09574.5  Protein  of unknown function (Duf2374)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   2.5e-05      0.17      14      35 ..       8      29 ..       6      32 .. 0.93
   2 ?    0.8   0.0     0.049   3.3e+02      14      38 ..     169     193 ..     162     195 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.5e-05
   PF09574.5 14 YaAmPvIiLsGFvaVavvsill 35
                Y+ +P+ +L G+v V+ ++++l
  MMETSP1325-20131115|4141_1  8 YGDIPFAFLVGYVTVSTFCLAL 29
                999****************986 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.049
   PF09574.5  14 YaAmPvIiLsGFvaVavvsillLsl 38 
                 Y  +P I  +   ++ ++ i lL++
  MMETSP1325-20131115|4141_1 169 YEHIPLITTAAATGITCTVIPLLEI 193
                 7789999999999********9987 PP

>> PF10660.4  Iron-containing outer mitochondrial membrane protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0034        23      48      61 ..      16      29 ..      12      32 .. 0.85
   2 ?    4.6   0.1    0.0039        27      27      49 ..     225     247 ..     221     252 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0034
   PF10660.4 48 alGYlaykaflpkk 61
                ++GY+++ +f+++ 
  MMETSP1325-20131115|4141_1 16 LVGYVTVSTFCLAL 29
                79*********975 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0039
   PF10660.4  27 gifrlsvkewlalvplvavtaal 49 
                  +++ls + wl++++ +a+++ +
  MMETSP1325-20131115|4141_1 225 NVASLSTQMWLQTATAAAGVGCV 247
                 6799**************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1382.90
//
Query:       MMETSP1325-20131115|4145_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-42  143.9   0.1    4.9e-42  143.5   0.1    1.1  1  PF01571.16 Aminomethyltransferase folate-binding domain
    1.3e-14   53.8   0.0    2.5e-14   52.9   0.0    1.5  1  PF08669.6  Glycine cleavage T-protein C-terminal barrel domain


Domain annotation for each model (and alignments):
>> PF01571.16  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.5   0.1   7.2e-46   4.9e-42      33     210 ..       4     193 ..       1     194 [. 0.94

  Alignments for each domain:
  == domain 1    score: 143.5 bits;  conditional E-value: 7.2e-46
                 -S-E-EEEEEE-----EEEEEEEEE-----......EEEEE-TTTHHHHHHHHHCTTS-..--EEEEE-TTTEEEEE-----HHHHHHHH---..-GGGS-TT-EEEE.---.EEEEE----------EEEE--HHHHHHHHHHHH---------B----HHHHHHH--------SS-.SS-TTTTT-GG CS
  PF01571.16  33 kpgsatytlllnekGgilddlivyrlgede......fllvvnaaaaekllawlekylvk..skveledltdelallalqGpkarellqelvdl..dleelpffqarev.lgg.kvlvsrtgytgedGfeiyvpaekalalwealleagkeagvkpaglgardtlRleaglplygndldeettPleaglew 210
                 ++g ++yt+++n++Gg++ dl+v r ++d       +++   ++ a+++l+w+++ ++   ++++++d+t+e++ll++qGpkarell ++vd+  ++e+l f + + + ++g +v+++r ++ ge Gfe+++pa++++++++al+++g+++g+++ g++a d+l  e+g++++++d   + + leag ++
  MMETSP1325-20131115|4145_1   4 PVGDTVYTAMCNHRGGVECDLTVSRIEDDLatgakqYYVAAGGGSAAHDLDWIRRSAQVggFDITVTDRTAEFGLLNVQGPKARELLMAVVDVpeQVEQLGFSKNMLIkVAGhEVRAIRLTFMGEYGFELHTPADNLVDVYRALMKEGAQFGIENSGYRAIDVLSAEKGYRHWSEDVRADDSALEAGYAF 193
                 7899*************************999**********************8777777******************************66447777777777777*8888**************************************************************************987 PP

>> PF08669.6  Glycine cleavage T-protein C-terminal barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.0   3.7e-18   2.5e-14       3      91 ..     209     303 ..     207     307 .. 0.90

  Alignments for each domain:
  == domain 1    score: 52.9 bits;  conditional E-value: 3.7e-18
                 ----HHHHCCHHC.-TTEEEEEEECSTT---------EE.---B---EEEEEE-S----EEEEEEE.........ETT-----EEEEE----EEEEE CS
   PF08669.6   3 fiGkeallrqkaegvarrrlvgleleltaplregepvyaddgekvGevtsgtySptlgknialayvr........teharigteveveirgkrirat 91 
                 f G+eal++qka+g + rrl +++++++ pl++ e +++ dge+vG++  ++++++ +++i+++yv         +++ +  +++e+e+ g r++a+
  MMETSP1325-20131115|4145_1 209 FQGREALEAQKAAGLT-RRLQCFTVDPSVPLHGSEVILR-DGEVVGYLRRAAFGHSINRSIGFGYVShpeggvvsVDYLKSADSWEIEVMGVRYPAK 303
                 88*************8.*********9655555555555.**************************88899***9********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1378.96
//
Query:       MMETSP1325-20131115|4139_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-77  259.0   0.0    1.4e-77  258.7   0.0    1.0  1  PF00025.16 ADP-ribosylation factor family
    1.1e-12   47.5   0.0    1.3e-12   47.2   0.0    1.1  1  PF00071.17 Ras family
    6.1e-12   45.0   0.0    8.2e-12   44.5   0.0    1.1  1  PF09439.5  Signal recognition particle receptor beta subunit
      1e-10   40.7   0.8    1.9e-07   30.0   0.1    2.1  2  PF00503.15 G-protein alpha subunit
    3.2e-09   36.1   0.0    4.1e-09   35.8   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    5.4e-09   36.4   0.0    6.9e-09   36.1   0.0    1.1  1  PF08477.8  Miro-like protein
    9.8e-05   22.2   0.0    0.00014   21.6   0.0    1.2  1  PF01926.18 50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.016   14.2   0.0      0.024   13.5   0.0    1.2  1  PF01591.13 6-phosphofructo-2-kinase
       0.13   12.0   0.1        0.2   11.4   0.0    1.4  1  PF13671.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.7   0.0   9.3e-81   1.4e-77      12     174 ..      96     257 ..      90     258 .. 0.98

  Alignments for each domain:
  == domain 1    score: 258.7 bits;  conditional E-value: 9.3e-81
                 TSEEEEEEE--TT---HHHHHHHHHS-EEEE-S--S-EEEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHHHHHHHH CS
  PF00025.16  12 kkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                 kke+ril++GLD+aGKtTil+klkl+e+vtt+PTigfnve++e+kn++ftvwDvGGq+k+RplW++Y+++t+++ifvvDs+dr+R++ a++e++++l+e+el+e +llv+aNKqDlp+a+s++e++++lgl+ l+ +r+++iq+c+a++g+gl+egl+wls +
  MMETSP1325-20131115|4139_1  96 KKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDEMHRMLNEDELRESVLLVFANKQDLPNAMSAAEMTDKLGLHGLR-HRQWYIQACCATTGDGLYEGLDWLSAT 257
                 89*************************************************************************************************************************************.************************975 PP

>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2   0.0   8.6e-16   1.3e-12       2     119 ..     101     217 ..     100     258 .. 0.81

  Alignments for each domain:
  == domain 1    score: 47.2 bits;  conditional E-value: 8.6e-16
                 EEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHH.HHHHHHHHHSTTTSSEEEE---TTGGG...G CS
  PF00071.17   2 lvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvk.kwveeikrvaeenvpivLvGnKvDlee...k 119
                 +++vG  a GKt++l++   ++  ++ ++Tig++    +  v+ k++++++wD  Gq++ + l + yy++++g++ v d ++r+  + ++ ++++ +++   ++ ++++ +nK Dl +    
  MMETSP1325-20131115|4139_1 101 ILMVGLDAAGKTTILYKLKLGEVVTT-IPTIGFNVE--T--VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARdEMHRMLNEDELRESVLLVFANKQDLPNamsA 217
                 899*******************8875.9***87654..4..55689******************************************9955555555555577899999******983332 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   5.4e-15   8.2e-12       2     137 ..      97     224 ..      96     227 .. 0.85

  Alignments for each domain:
  == domain 1    score: 44.5 bits;  conditional E-value: 5.4e-15
                 ---EEEEE--TT---HHHHHHHHHSS-------S.S-EEETT-...-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT---HHHHHHHH CS
   PF09439.5   2 skpavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflakspklikdaL 137
                 ++ ++l+vGl  +GKT+++ +L  ++v +t   +  +  + ++   k+ ++t+ D+ G++k+r  l  +  + ++ +gl+fvvDS  d  ++    + +  +l + e l+++v +l+  nKq+l  a s+  + d+L
  MMETSP1325-20131115|4139_1  97 KEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIgFNVETVEY---KNISFTVWDVGGQDKIRP-LWRH--YYQNTQGLIFVVDSN-DRDRIDAARDEMHRMLNEDE-LRESV-LLVFANKQDLPNAMSAAEMTDKL 224
                 5679******************************889999999...*****************7.5555..58899********97.55556666677888998888.55555.66777*****9999988877766 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00022      0.34      54      80 ..      94     120 ..      83     122 .. 0.87
   2 !   30.0   0.1   1.3e-10   1.9e-07     208     286 ..     126     193 ..     121     211 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00022
                 XXXXEEEEEEEXXXXXXXHHHHHHHHH CS
  PF00503.15  54 kkkkevklLlLGqgeSGKsTilkqfkl 80 
                   kke+++L++G +  GK+Til ++kl
  MMETSP1325-20131115|4139_1  94 VGKKEMRILMVGLDAAGKTTILYKLKL 120
                 5699******************98875 PP

  == domain 2    score: 30.0 bits;  conditional E-value: 1.3e-10
                 XXXXXXXEEEEEXX.XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEGGGTTXBXSSXTTSBHHHHHHHHHHHHHT CS
  PF00503.15 208 rlkttGiseikfevesktefrlvDvGGqrserkkWipcfedvdaiiFlvslsefdqvlyedesvnrleeSlklFksicn 286
                  ++t+G++  ++e+ +++ f ++DvGGq + r  W +++++++ +iF+v   + d + +  ++  r+          +n
  MMETSP1325-20131115|4139_1 126 TIPTIGFNVETVEY-KNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDEMHRM----------LN 193
                 57888999899999.***********************************88888887777777666..........34 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.0   2.7e-12   4.1e-09       1     125 [.     100     213 ..     100     227 .. 0.77

  Alignments for each domain:
  == domain 1    score: 35.8 bits;  conditional E-value: 2.7e-12
   PF04670.7   1 klLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesre.leedlekfqeileallqyspeakvfvlihKmDlis 125
                 ++L++G   +GKt+    i+ ++   ++++   Ti  + ++v+  +n+++ +wD+gGq+++          + ++n + li+V+D++ r+ ++++ ++++++l+   +  +e  + v+ +K Dl +
  MMETSP1325-20131115|4139_1 100 RILMVGLDAAGKTT----ILYKLKLGEVVTTIPTIGFNVETVE-YKNISFTVWDVGGQDKIRPL-----WRHYYQNTQGLIFVVDSNDRDrIDAARDEMHRMLNE--DELRESVLLVFANKQDLPN 213
                 69***********9....899999******************7.889***********998877.....4899**************665344444444444432..2234555566666666655 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   4.6e-12   6.9e-09       1     119 []     100     210 ..     100     210 .. 0.88

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 4.6e-12
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 +++ vG   +GK+++l +l  +e +       ++  t++ + ++v+ ++ ++ +wd+gg++++     +  +++++ ++v+d++d++ ++ ++  + ++ +  +l +++++ +++nk+D
  MMETSP1325-20131115|4139_1 100 RILMVGLDAAGKTTILYKLKLGEVV-------TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDEMHRMLNEDEL-RESVLLVFANKQD 210
                 78999***************9*999.......4444455555678888888**********999998999**********************9999999999975.67899******98 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   9.4e-08   0.00014       2     103 ..     101     193 ..     100     209 .. 0.69

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 9.4e-08
                 EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSE.SEEEEETTEEEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTS..HHHHHHHHHHHHHH CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrdi.tenevkkekiilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasa..vlkeadkellnele 103
                 + +vG+  +GK+t++ +L   +++ +  + g   ++ ++++     ++++D+ G       d     i+  +++  +++++l++vvd+++  ++++a  e+ ++l+
  MMETSP1325-20131115|4139_1 101 ILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETvEYKN---ISFTVWDVGGQ------D----KIRPLWRHYyQNTQGLIFVVDSNDrdRIDAARDEMHRMLN 193
                 789***************96667566565566666634433...2389******2......2....478899***9***********8776655556666656662 PP

>> PF01591.13  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.6e-05     0.024      12      51 ..      97     136 ..      89     156 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.6e-05
  PF01591.13  12 sklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgk 51 
                 +++ i++vGL a gKt+i  kl      ++++t  Fnv  
  MMETSP1325-20131115|4139_1  97 KEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVET 136
                 56789****************9888888888898888865 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00013       0.2       2      38 ..     101     135 ..     101     211 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00013
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrlsqdtlrkrlf 38 
                 +l+vGl ++GK+t + +l  klg v+ + +t+   ++
  MMETSP1325-20131115|4139_1 101 ILMVGLDAAGKTTILYKL--KLGEVVTTIPTIGFNVE 135
                 79***********99885..47777777777665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.61
# Mc/sec: 1029.25
//
Query:       MMETSP1325-20131115|4137_1  [L=1006]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-37  127.7   0.0    5.5e-37  127.1   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
    7.2e-31  107.1   0.0    1.1e-30  106.6   0.0    1.2  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.1   0.0   8.1e-41   5.5e-37      28     257 ..     741     996 ..     719     998 .. 0.84

  Alignments for each domain:
  == domain 1    score: 127.1 bits;  conditional E-value: 8.1e-41
                 EEEEEEEEECT...........TSBHHHHHHHHHHHHHHHHT.-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHT....GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET......TTEEEE-----CEES..TTTSCEEESTT-EECGGGS-HHHHHH.SEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTS..BHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12  28 evkVavKtlke...........saeeeekeefleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlefLrkk....ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee......ekvvkisDfGLardi..ekddyykkkeeaklpvkWmapEslke.kkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekc..peelyelmkqCweeepeeRptfkelve 257
                   kVavKt+               +  +++++ +e ++++ + +hpniv+++g   ++ + +iv ey +gG+L+e   +      +  ++ +  ++++ + a G+e  ++ +++H d+aarN+Ll++      + v k++DfGL+     +++ +  + ++++ p+ Wm+pE+l+   +f+++sD +  G+l++E+ + ge+p++g++ +ev +l+ egk+le+p +   +++l++l  +C+++++++Rpt+k+++ 
  MMETSP1325-20131115|4137_1 741 GRKVAVKTVPTshlglgsdgsgAGSTASSKALEHEGALLSMIgHHPNIVRFIGTAHDSTHAYIVSEYEEGGNLQERTSRGggqnGRGPVSGSLACRLVRDAAAGLECSHAGRVLHNDVAARNCLLSTadltspGCVLKLADFGLSTLRprHSHAEFIAGGDSQYPIGWMPPEALHPpYVFSEASDTYGLGCLIYELTS-GERPWAGVELSEVRRLVGEGKKLEAPIYLrnTPTLKNLFDDCLATDASKRPTMKDVIG 996
                 5667777764323433333332223344899999*****************************************9998777767888999999********************************98898877799********98843444555999***************97256*****************99.99***********************987522679********************9975 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.6   0.0   1.6e-34   1.1e-30      12     255 ..     731     995 ..     718     998 .. 0.81

  Alignments for each domain:
  == domain 1    score: 106.6 bits;  conditional E-value: 1.6e-34
                 -EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH..........HHHHHHHH.H-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH......HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E......EE------EEECEESS-CSS----G.....GGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHH CS
  PF00069.20  12 fGkVykakkkktgkkvAvKilkkeeekskkektavr..........Elkilkkl.sHpnivkllevfeekdelylvleyveggdlfdllk......kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel......kiaDFGlakkleksseklttlvgtr.....eYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeil 255
                  ++ +  + k +g+kvAvK++ +++     + + +           E ++l ++ +Hpniv+++++ +++++ y+v ey egg+l++  +       +g++s   ++++++  + gle  H  +++H D+   N+Ll+  + +      k+aDFGl+     ++++++ + g        +m+PE l      ++++D+++lG+++yel++g+ p+ g +  + ++l+ + +k + +   +++    ++lk+l +++l++d++kR+t+++++
  MMETSP1325-20131115|4137_1 731 NSTAF--VAKYEGRKVAVKTVPTSHLGLGSDGSGAGstasskalehEGALLSMIgHHPNIVRFIGTAHDSTHAYIVSEYEEGGNLQERTSrgggqnGRGPVSGSLACRLVRDAAAGLECSHAGRVLHNDVAARNCLLSTADLTspgcvlKLADFGLSTL-RPRHSHAEFIAGGDsqypiGWMPPEALHPPYVFSEASDTYGLGCLIYELTSGERPWAGVELSEVRRLVGEGKKLEAPIYLRNT----PTLKNLFDDCLATDASKRPTMKDVI 995
                 33444..445566669999999998766555444335566788899********99******************************999999998888899*************************************7666699************97.666666666665431222268*******888999*************************666666666666665544444444....9********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1006 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       586  (0.0428613); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.49u 0.39s 00:00:01.88 Elapsed: 00:00:00.76
# Mc/sec: 3172.02
//
Query:       MMETSP1325-20131115|4148_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   12.8   2.9      0.014   13.5   0.9    1.4  1  PF07778.6  Mis6
      0.074   12.1   1.2       0.11   11.5   0.8    1.3  1  PF04582.7  Reovirus sigma C capsid protein
        9.3    6.7  13.1    7.7e+02    0.6   9.0    2.8  1  PF09392.5  Type III secretion needle MxiH like


Domain annotation for each model (and alignments):
>> PF07778.6  Mis6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.9     3e-06     0.014      27     124 ..      13     113 ..       5     126 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3e-06
   PF07778.6  27 awkvkdkadnsksvsesksleDsehaddq..DaleealeyiekaskkaSkkkktvlekhlktlesvalerGlapeeid.iLldvvlsgkldkavktrllKc 124
                 +w  ++k+ ++k  +e+  +e s+ +  +  D l++ l  +e a +++S++ +  l+ ++++l++ + +r ++ +e++ +L +v+  + l k+++ +l ++
  MMETSP1325-20131115|4148_1  13 QWDLEQKSLEHKHFQERLRFEKSDAESARiiDVLQSRLRKLEEAARRPSHSDDARLRGEVQNLKQALADREAQVKEMAtRLYQVARQEALYKTTEAALKRS 113
                 799999999********99998888887788***************************************9998888626788888888888887776555 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.8   2.3e-05      0.11      43     150 ..      64     182 ..      36     203 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.3e-05
   PF04582.7  43 ataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlsel......v.....sahdaalsslqtevdanstdisnlksdvsanglnitdleervk 150
                   a l+  v+++ + l+d +a+++++++ l +v  +    +t+ aal+ s+ +    l ++  +      v     ++ ++a+++ ++ ++a  ++i   k ++s  + n+   + r +
  MMETSP1325-20131115|4148_1  64 DDARLRGEVQNLKQALADREAQVKEMATRLYQVARQEALYKTTEAALKRSIGKEKKLLEKVERMeqeavaVnrnakQEIAQAMATCERRSKAADAAIEAAKKKISNDTTNLYATQARFR 182
                 45678999999999999999999999999999988888888888999999976555444433220001111110002234566777777778888888888888888877777777765 PP

>> PF09392.5  Type III secretion needle MxiH like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   9.0      0.17   7.7e+02      15      63 ..     126     181 ..      23     197 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.17
                 X............XXXXXXXXXXXXXXXXX.............XXXXXXXXXX-S- CS
   PF09392.5  15 s.....aagagntyaeisaaldaakaaarasasev..tstasvsdperllelQmel 63 
                        a ++n ++ei +a+++ +  ++a++ ++  +++  ++d+  l ++Q++ 
  MMETSP1325-20131115|4148_1 126 RmeqeaVAVNRNAKQEIAQAMATCERRSKAADAAIeaAKKKISNDTTNLYATQARF 181
                 03443357799999******99999999999988866777889**********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2247  (0.16435); expected 273.4 (0.02)
Passed bias filter:                      662  (0.0484201); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.39s 00:00:01.21 Elapsed: 00:00:00.60
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|4147_1  [L=812]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-09   36.2   0.5     0.0019   17.2   0.1    2.7  2  PF00036.27 EF hand
    1.2e-08   33.9   0.4      0.008   15.8   0.0    2.8  2  PF13405.1  EF-hand domain
      2e-08   34.1   0.1    5.8e-08   32.6   0.1    1.8  1  PF13499.1  EF-hand domain pair
    2.3e-07   29.7   0.1    0.00052   19.1   0.0    2.7  2  PF13202.1  EF hand
    8.6e-06   25.1   0.4      0.024   14.1   0.0    2.5  2  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.1e-06     0.003       2      24 ..     703     725 ..     702     729 .. 0.89
   2 !   17.2   0.1   7.1e-07    0.0019       2      27 ..     761     786 ..     760     788 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.1e-06
                 HHHHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfke 24 
                 ++++F+ +D+++dG ++  E+ +
  MMETSP1325-20131115|4147_1 703 WRKLFDAMDVNNDGVVTHAELAK 725
                 79******************976 PP

  == domain 2    score: 17.2 bits;  conditional E-value: 7.1e-07
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 l+++F+ +D+D++  IsfeEf ++l+
  MMETSP1325-20131115|4147_1 761 LERVFAAIDVDQNKAISFEEFYSFLN 786
                 789******************99885 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.9e-06     0.008       2      24 ..     703     725 ..     702     733 .. 0.90
   2 !   15.3   0.1   4.3e-06     0.012       2      28 ..     761     787 ..     760     795 .. 0.91

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.9e-06
                 HH---GCC-------B---HHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrd 24 
                 +r++F+++D ++dG ++ +EL +
  MMETSP1325-20131115|4147_1 703 WRKLFDAMDVNNDGVVTHAELAK 725
                 79******************976 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 4.3e-06
                 HH---GCC-------B---HHHHHHH. CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                 l+++F ++D d++  i++eE+ ++L++
  MMETSP1325-20131115|4147_1 761 LERVFAAIDVDQNKAISFEEFYSFLNQ 787
                 679*********************986 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.1   2.1e-11   5.8e-08       2      65 ..     703     784 ..     699     785 .. 0.87

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 2.1e-11
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels...............deevre.......vldyifkelDkngdGvlsfeEflqa 65 
                 ++++F+++D+++dg ++ +eL +  k +  +                      e       vl+++f+ +D +++  +sfeEf+++
  MMETSP1325-20131115|4147_1 703 WRKLFDAMDVNNDGVVTHAELAKSVKDSARDPGvyrqlqeelgipdsvK----EehlhdsdVLERVFAAIDVDQNKAISFEEFYSF 784
                 6789**********************9887666*******999965551....445556899999******************987 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.9e-07   0.00052       3      23 ..     705     725 ..     704     728 .. 0.89
   2 !    7.8   0.1    0.0007       1.9       1      24 [.     761     784 ..     761     785 .. 0.90

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 1.9e-07
                 HHHHHH--S----B-HHHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkr 23 
                 ++F+a+D+N+DG +++ EL +
  MMETSP1325-20131115|4147_1 705 KLFDAMDVNNDGVVTHAELAK 725
                 79*****************75 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0007
                 HHHHHHHH--S----B-HHHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkrl 24 
                 l+ +F a+D++    Is+eE++ +
  MMETSP1325-20131115|4147_1 761 LERVFAAIDVDQNKAISFEEFYSF 784
                 6779*****************987 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00045       1.2      30      48 ..     706     724 ..     704     729 .. 0.86
   2 !   14.1   0.0   8.7e-06     0.024      18      51 ..     751     785 ..     745     787 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00045
   PF13833.1  30 lfrefDtdgdGkisfeEFc 48 
                 lf+++D ++dG ++ +E  
  MMETSP1325-20131115|4147_1 706 LFDAMDVNNDGVVTHAELA 724
                 8************999876 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 8.7e-06
   PF13833.1  18 glkglseee.vdilfrefDtdgdGkisfeEFcvll 51 
                 + ++l +++ ++ +f ++D d++ +isfeEF+++l
  MMETSP1325-20131115|4147_1 751 KEEHLHDSDvLERVFAAIDVDQNKAISFEEFYSFL 785
                 5556667777999*******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.23u 0.36s 00:00:01.59 Elapsed: 00:00:00.63
# Mc/sec: 3088.64
//
Query:       MMETSP1325-20131115|4149_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-26   91.0   0.0    9.5e-26   90.2   0.0    1.3  1  PF00588.14 SpoU rRNA Methylase family
    0.00054   19.9   0.1     0.0037   17.2   0.0    2.1  2  PF08032.7  RNA 2'-O ribose methyltransferase substrate binding


Domain annotation for each model (and alignments):
>> PF00588.14  SpoU rRNA Methylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   0.0   1.4e-29   9.5e-26       2     134 ..     170     309 ..     169     311 .. 0.92

  Alignments for each domain:
  == domain 1    score: 90.2 bits;  conditional E-value: 1.4e-29
                 ---EEES-S-------HHHHHHH------EEE-.--S-TTSHHHHHHC---TTTS--EE-S----HHHH.HHHH----E-------EGGGS-TTS-EEEEE--------HHHHHH-S-....-EE---...--------HH CS
  PF00588.14   2 livvldeiedpgNlGaiaRtaaafgaselilvkprsvdllnkkakrasagalellelkvvksleealkd.lkeeglkviatslkgkslreielkekvalvfGnEdkGlsnellekade....lvkIpm...sgeveSLNva 134
                 l++++d+++dpgN+G+++R+a a+g+++++lv+  ++d++n+ka+r+++ga   l++ +vk++e+a       eg+++ a++ +g ++++++++++ alv+G E  Gls e+++++       v+Ipm   +g+veSLN a
  MMETSP1325-20131115|4149_1 170 LYLICDGVSDPGNMGTLVRSAGATGVEGIVLVG-GCADPFNPKALRSAMGATLRLPIMQVKDWESATVVgGVLEGVSIHAADMEGVAYYDVDWSRPSALVVGAEAAGLSGEVRSAVASgaigAVSIPMdtsYGQVESLNAA 309
                 899******************************.9*****************************96554256679*************************************99988555669*****7777899****97 PP

>> PF08032.7  RNA 2'-O ribose methyltransferase substrate binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.14   9.8e+02       1      14 [.      25      38 ..      25      43 .. 0.89
   2 !   17.2   0.0   5.4e-07    0.0037      43      75 ..      89     121 ..      72     122 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.14
   PF08032.7  1 lieGlhaVeeALks 14
                l+eG ++V +AL++
  MMETSP1325-20131115|4149_1 25 LLEGHRLVCDALEA 38
                79*********987 PP

  == domain 2    score: 17.2 bits;  conditional E-value: 5.4e-07
   PF08032.7  43 gikvqlvskkkLdklsgtvnHQGvvaevkppey 75 
                 g  v  +s+++L+ ++ t+++Q vva+v+ p+ 
  MMETSP1325-20131115|4149_1  89 GSAVVAASEEVLKVVATTDTPQQVVAVVDRPQL 121
                 5578889**********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 1682.44
//
Query:       MMETSP1325-20131115|4152_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 371.20
//
Query:       MMETSP1325-20131115|4150_1  [L=632]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.6e-199  662.1  11.9   5.5e-199  661.8   8.3    1.1  1  PF02990.11 Endomembrane protein 70


Domain annotation for each model (and alignments):
>> PF02990.11  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  661.8   8.3    4e-203  5.5e-199       1     521 []      48     590 ..      48     590 .. 0.97

  Alignments for each domain:
  == domain 1    score: 661.8 bits;  conditional E-value: 4e-203
  PF02990.11   1 ltYeyyslpfcrpektikkksesLgevlrgdrivespyklkfleekecevlckkkltkeevkllkkaikeeyvvqwliddlpvatkvekveekkvgfesgfslgkk...deekiylfnhldleieyhaedndd...nrivevevkprsvkes...............scsla...eespqelkedeeeleltftYsVkwkesevkwasRwdkylkaeedaqihwfsiinslvivlfLsglvavillRtlkkdlaryneedeeedkqeesgwklvhgDvfrepr.kskllsilvgsGvqllllvlvvlvlallgflspssrgslltaaillyvllgivagYvsarlyktlkgkkwkrnliltaillpgivfvilfvlNlvlwaksssgavPfstlvvllllwflvsvPLsllGgivgfrkealeeapvrtnqiprqiPeqkwylktllsillaGilpfgaifielffifsslWlekiYylfGflflvfiiLvvvtaevsivltYfqLcaEdyrWwWrsflvsgstavYvflysiyyfvtklkisgfv 521
                 l+Y+yy+lpfc+p++  k+ se+Lgevl+gd i +s y+++++    c++lc+k+ +k+e++l+++ i++ey ++w++d+lp a++ e+++  + gf+ gf         ++ +yl+nh+++ ++yh++ + +    riv++e+ p s++++               +c+     ++ p + +  ee +e+ +tY+Vkw++s+++wa+Rwd+ylk   d +ih+fsi+nsl+ivlfL+g+va+i+lRtl+kd++ yne+++ e++qeesgwklvhgDvfr p+ +++lls+l g+Gvq++++++ ++++allgflsp++rg llta++ll+v++g +agY++arlyk ++gk wk+n+ilta+l+p +v+vi++ l ++lw +++s avPfst+ +l+llwf++s+PL+l+G+++gf+ke + e pvrtn ip+ iP+q wy+++l++i l+Gilpfga++ielffi s+lWl++iYy+fGfl++v+ iL+ ++ae++iv++YfqLc Edy+WwWrsfl+sgs+a+Y+fly++ yfv kl+i+gfv
  MMETSP1325-20131115|4150_1  48   590
                 59************8.99**************************************************************************9999*99999876677788999*************6533.33559**********************999998863555456688999999999999**********************************************************************************************899****************************************************************************************************************************************.************************************************************************************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       913  (0.0667788); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.13u 0.39s 00:00:01.52 Elapsed: 00:00:00.79
# Mc/sec: 1917.09
//
Query:       MMETSP1325-20131115|4151_1  [L=462]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-77  258.7   0.0    6.9e-77  258.5   0.0    1.1  1  PF01808.13 AICARFT/IMPCHase bienzyme


Domain annotation for each model (and alignments):
>> PF01808.13  AICARFT/IMPCHase bienzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.5   0.0     5e-81   6.9e-77      69     315 .]      12     277 ..       1     277 [. 0.93

  Alignments for each domain:
  == domain 1    score: 258.5 bits;  conditional E-value: 5e-81
                 ....----EEEE-----TTS--.EEEE-SSSS...-SEEEEE--.---HHHHHHHHHHHHHHHHHH...---EEEEETTEE---B--.................H.HHHHHHHH----TTTT---EEEESS---HHHHHHHHTS-----EE----HHHHHHHHHS------EEEE-TT---.SEEEEE----EEEEE------SGGGG-.B-SS---..HHHHHHHHHHHHHHHTS-SS-EEEE----B--------SHHHHHHH---HH CS
  PF01808.13  69 eltlelvkklslRYGenpHqkaafyvekelkeasiataeqlqGkelsynnllDadaalelvkefee...epaaaivKHvnPcGvavg.................ksiaeAyarAreaDrvsafGgiiAlndevdvetAkeiseefleviiAPkyeeealevlkkKknlrvlvlqedaervp.elelrkvsGglLvqdrdaalvdkselk.vvtkrkpt.eqeleDlllawkvvkyvksnaiviAkngmvvGiGaGqvsRvesarlAgdka 315
                  + +++ ++++l+YG+npHqk+a  ++   +  + +++++ +G+ ++y+nllDa++a++lv+e+++    paaa++KHv+P+G+avg                 + +a Ay rAr+aD++ +fG++ A++d vdv+tA  +++e++++iiAP+ye+eale+l+ Kk+++++vl+ +++ +p ++e r+v+G +L    +++lv +++++ v+t +++  e++++Dl+la   +ky++sn++ +A ng+++G+GaGq+sRv++ +lAg+k+
  MMETSP1325-20131115|4151_1  12 VVCRAYAHEMPLKYGCNPHQKPA-SISRPIS--GALPFQVANGT-PGYINLLDALNAYQLVAELKQsldLPAAASFKHVSPAGAAVGtpltageaaayeingevTPLALAYLRARQADPMCSFGDFAAVSDVVDVATAMVLKKEVSDGIIAPGYEPEALEILASKKGGKFIVLTASENFTPpAVEYREVYGAVLRSSXNETLVTADSMSnVITTKTDVpESAVRDLVLASITIKYTQSNSVAYAVNGQIIGVGAGQQSRVDCVKLAGRKV 277
                 566788999*************4.4444444..459********.********************98989*********************************967************************************************************************9999*****************99999999988888888888************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.34s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 1942.31
//
Query:       MMETSP1325-20131115|4153_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-06   27.9   5.6    1.3e-06   27.9   3.9    2.9  4  PF04403.8 Paraquat-inducible protein A


Domain annotation for each model (and alignments):
>> PF04403.8  Paraquat-inducible protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.018   2.5e+02     123     141 ..      24      42 ..       4      48 .. 0.84
   2 ?   -4.1   0.5      0.66     9e+03     109     115 ..      96     102 ..      89     111 .. 0.44
   3 !   27.9   3.9   9.8e-11   1.3e-06      55     128 ..     163     233 ..     156     235 .. 0.89
   4 ?   -2.5   0.1      0.21   2.9e+03       3      18 ..     274     289 ..     273     294 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.018
   PF04403.8 123 siepgpglwaFalvvlltm 141
                  +epg+g++ F++++++++
  MMETSP1325-20131115|4153_1  24 YVEPGWGFYGFLGCTMMSL 42 
                 589**********999875 PP

  == domain 2    score: -4.1 bits;  conditional E-value: 0.66
   PF04403.8 109 vailval 115
                 +a++ al
  MMETSP1325-20131115|4153_1  96 MAMVCAL 102
                 2222222 PP

  == domain 3    score: 27.9 bits;  conditional E-value: 9.8e-11
   PF04403.8  55 llvflasivvPllklllllllllslqrkrklpakkrllrileaigkWsMlDVfvvailvalvklaalasiepgp 128
                 +++f+  + +Pll +l+llll+++     +l+a+++++ ++e+   Ws l+Vfvv+i+ al++++ +a++ + p
  MMETSP1325-20131115|4153_1 163 MAFFAYGFAMPLLHMLSLLLLWVMP---FTLKAQRKIFVLTEVTNAWSGLEVFVVSIIAALLEIETFAQFLVAP 233
                 677888999************9999...47888888******************************99987665 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 0.21
   PF04403.8   3 qrtlalllaalillip 18 
                 q ++ l  aa+i++++
  MMETSP1325-20131115|4153_1 274 QGCWILFAAAFIFIVV 289
                 5678888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       589  (0.0430807); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 1770.64
//
Query:       MMETSP1325-20131115|4154_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 533.93
//
Query:       MMETSP1325-20131115|4155_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-23   81.0   0.1    4.9e-23   80.8   0.0    1.0  1  PF01221.13 Dynein light chain type 1


Domain annotation for each model (and alignments):
>> PF01221.13  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.0   3.6e-27   4.9e-23       5      88 ..      16     103 .]      12     103 .] 0.90

  Alignments for each domain:
  == domain 1    score: 80.8 bits;  conditional E-value: 3.6e-27
                 XX-EEETTS.-HHHHHHHHHHHHHHHHH-S...SHHHHHHHHHHHHHHHH-S-EEEE-------EEES--SEEEEEE----EEEEEE- CS
  PF01221.13   5 kavvkaadm.seemqeeaielaaealekfe...eekeiAkhiKkefDkkygptWhcivGksFGsyvthekktfiYfyigklaillfkt 88 
                 ++ vk+ad+ ++e  +ea+e++  al+k+    +++  Ak iK  +D+k+g++Whc +G+ FG+ vt++++++iY+y+g+l illfk+
  MMETSP1325-20131115|4155_1  16 RPIVKHADIvPQETAAEAVEVVTLALDKYIatkNYEAAAKSIKDSMDRKFGNMWHCAIGEGFGFDVTYQQRNMIYVYYGNLGILLFKC 103
                 6789999964889**************98643244569*************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       539  (0.0394236); expected 273.4 (0.02)
Passed bias filter:                      495  (0.0362054); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.69
# Mc/sec: 357.72
//
Query:       MMETSP1325-20131115|4156_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|4146_1  [L=501]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.80u 0.38s 00:00:01.18 Elapsed: 00:00:00.52
# Mc/sec: 2308.80
//
Query:       MMETSP1325-20131115|4158_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-09   37.7   0.0    1.6e-09   37.3   0.0    1.2  1  PF00158.21 Sigma-54 interaction domain
    1.8e-06   27.8   0.0    2.9e-06   27.1   0.0    1.4  1  PF00072.19 Response regulator receiver domain
  ------ inclusion threshold ------
      0.074   12.2   0.0      0.096   11.9   0.0    1.1  1  PF00809.17 Pterin binding enzyme


Domain annotation for each model (and alignments):
>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   3.6e-13   1.6e-09       1      45 [.      77     121 ..      77     122 .] 0.96

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 3.6e-13
                 --.-SHHHHHHHHHHHHHTTS-S-EEEE-------HHHHHHHHHT CS
  PF00158.21   1 ligesealkelleqikkvaktdltvlitGesGtGKellAraihea 45 
                 +ig+s+ + e+ ++i+kva+t+++vli+Ge+GtGKel+Ar +he+
  MMETSP1325-20131115|4158_1  77 IIGDSKGIVEVKDTIEKVAPTEARVLINGENGTGKELVARWLHEK 121
                 7899***************************************86 PP

>> PF00072.19  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   6.4e-10   2.9e-06      67     111 ..       7      51 ..       1      52 [. 0.87

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 6.4e-10
                 HHTTTSEEEEEES-TTHHHHHHHHHTT-SEEEESS--HHHHHHHH CS
  PF00072.19  67 eeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvkav 111
                  e+ ++p ++++ahg+ ++a++a k Ga df+ Kp d ++++ +v
  MMETSP1325-20131115|4158_1   7 DEGIDVPFVMISAHGTIDTAVDATKKGAYDFIQKPPDLNRILLTV 51 
                 555789*****************************9999998776 PP

>> PF00809.17  Pterin binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.1e-05     0.096      36     127 ..      23     109 ..      19     119 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.1e-05
                 EEEE.........--SGCHHHHHHHHHHHHHHH.HHTTSEEEEE-SSHHHHHHHHHCSS-EEEEEEBS-HHHHHHHHHHH---EEEEE---.. CS
  PF00809.17  36 iDiGgestrPga.gmvskeeelerlvpvlealrkeeekvpiSiDtfkaevaeaAlkagadiindvsglendeemaklaaeygaavVlmhmdgk 127
                 iD  +++t+ ga ++++k  +l+r++  ++++ +   + ++   +++++v+++ +++g dii d+ g+ + +++++ +a  +a+v ++  +g+
  MMETSP1325-20131115|4158_1  23 IDTAVDATKKGAyDFIQKPPDLNRILLTVRNALD---NSQL---STETKVLRKKVSKGYDIIGDSKGIVEVKDTIEKVAPTEARVLINGENGT 109
                 7888888887777889999999999988888886...5666...5999************************************999866655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      411  (0.0300614); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.68
# Mc/sec: 429.93
//
Query:       MMETSP1325-20131115|4157_1  [L=350]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-72  242.7   0.0    3.7e-72  242.5   0.0    1.0  1  PF00069.20 Protein kinase domain
    1.7e-43  148.5   0.0      2e-43  148.2   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
    2.2e-05   23.5   0.1    3.6e-05   22.8   0.1    1.4  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0024   17.5   0.1     0.0099   15.5   0.0    1.7  2  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
       0.03   13.5   0.0      0.061   12.5   0.0    1.4  1  PF10707.4  PhoP regulatory network protein YrbL
      0.033   13.6   0.1      0.058   12.8   0.1    1.3  1  PF01633.15 Choline/ethanolamine kinase
      0.041   13.6   0.6       0.13   12.0   0.4    1.8  1  PF09501.5  Probable sporulation protein (Bac_small_yrzI)
      0.044   13.0   0.1       0.07   12.3   0.1    1.3  1  PF01163.17 RIO1 family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.5   0.0   2.2e-75   3.7e-72       1     260 []      14     279 ..      14     279 .. 0.94

  Alignments for each domain:
  == domain 1    score: 242.5 bits;  conditional E-value: 2.2e-75
                 EEEEEEEE----EEEEEEEET.....TCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E...EE------EEE..CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   1 yelleklGsGsfGkVykakkk.....ktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel...kiaDFGlakkl..eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 y+l+++lGsG+f++V  ++ k     ++++ +A+K+++k +  ++  +  ++E++i+k+++H ++++l+e+f + +e+ylv+e+vegg+lf+ + k+ ++se e+++++++ile ++ylH++g++HrDLKpeN+Ll++k++    k+aDFG+ak++  + +++ l+t++gt+ Y+APE+l+ ++ y++ vDvWs+Gvi+y +l g +pf+++   +q el++ i+k+ ++++ + +++ se++kdli+++l  +p+ R++++ +lkh w+
  MMETSP1325-20131115|4157_1  14 YTLGKELGSGAFSVVRLGSSKvpidgTESRDFAIKVIQKASLTQEDLIGLQQEIQIMKEINHRHVIRLYEYFDDPKEYYLVTELVEGGELFERIVKKSRYSELEARDCVKTILETMSYLHERGVVHRDLKPENLLLTSKNDDadiKVADFGFAKHIegQDEDHALDTQCGTPGYVAPEILK-HNAYGTLVDVWSIGVIVYIMLGGYPPFYSD---NQTELFKLIKKGIYQFHPKYWDHISEDAKDLIRSMLVINPDHRPSCATLLKHTWI 279
                 68899**********7666542222256669*****************9999************************************************************************************955544466*********9998889999*****************.******************************...*****************************************************97 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.2   0.0   1.2e-46     2e-43       2     257 ..      15     275 ..      14     277 .. 0.90

  Alignments for each domain:
  == domain 1    score: 148.2 bits;  conditional E-value: 1.2e-46
                 EEEEEE-------EEEEEEET.TTTSSEEEEEEEEE.CTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---...TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12   2 elgkklGeGafGkVvegtlkg.ekekkevkVavKtl.kesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee...ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekp...ekcpeelyelmkqCweeepeeRptfkelve 257
                 +lgk+lG+Gaf+ V  g  k   + +++ + a+K++ k+s ++e+   +++e++imk+++h+++++l+ ++ + +++++vte+v+gG+L e + kk  ++ +  +  +++  i + m+yL+++ +vHrdL   N Ll++   +  +k++DfG a++ie +d+ ++ +++     ++apE+lk++ + +  DvWs Gv+++ +   g  p+ + +++e+++l+k+g     p   ++++e+ ++l+++ +  +p++Rp+ ++l +
  MMETSP1325-20131115|4157_1  15 TLGKELGSGAFSVVRLGSSKVpIDGTESRDFAIKVIqKASLTQEDLIGLQQEIQIMKEINHRHVIRLYEYFDDPKEYYLVTELVEGGELFERIVKK--SRYSELEARDCVKTILETMSYLHERGVVHRDLKPENLLLTSkndDADIKVADFGFAKHIEGQDEDHALDTQCGTPGYVAPEILKHNAYGTLVDVWSIGVIVYIM-LGGYPPFYSDNQTELFKLIKKGIYQFHPkywDHISEDAKDLIRSMLVINPDHRPSCATLLK 275
                 5799****************98899999********6668888999*********************************************99998..78888888999999*************************98544559************99999999999999999*************************955.5699***************88765544412267899*******************998865 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.1   2.1e-08   3.6e-05      94     172 ..      93     170 ..      61     180 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 2.1e-08
   PF06293.9  94 llteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarrrl 172
                 l+te +eg +  + i++k   ++e   r  ++ + ++++ +h++gv H+dl + n+ll  ++++a++ + D+  a++ +
  MMETSP1325-20131115|4157_1  93 LVTELVEGGELFERIVKK-SRYSELEARDCVKTILETMSYLHERGVVHRDLKPENLLLTSKNDDADIKVADFGFAKHIE 170
                 899999999999999997.77**************************************************97666655 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.33   5.6e+02      18      84 ..      40     106 ..      24     134 .. 0.68
   2 !   15.5   0.0   5.8e-06    0.0099     157     196 ..     129     167 ..     102     169 .. 0.72

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.33
                 ETT.TEEEEEESSC....CHHHHHHHHHHHHHHHCCSSSB--BEEE..E-CSSCSCEEEEEE---HHBCCT CS
  PF01636.18  18 tgagryvlrrarpa....raaeelrrevallrlLakagipvPevlagdtdddvlgllfalleyvpgevler 84 
                 t+ ++++ +++ +a    +    l++e ++++ +  ++  v +++ +  d  + +l+++l+e+  ge +er
  MMETSP1325-20131115|4157_1  40 TESRDFAIKVIQKAsltqEDLIGLQQEIQIMKEINHRH--VIRLYEYFDDPKEYYLVTELVEG--GELFER 106
                 44467777776666633355556678888888888774..56888888899999999999998..666666 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 5.8e-06
                 HHHHHCSS--EEB-SS-SGGGEEEE.TTTTEE.EE---TT-B CS
  PF01636.18 157 aallpgaeppvllHgDlhpgNllvd.pddgrv.gviDfedag 196
                  + l+   +++++H+Dl+p Nll++ ++d+    v Df++a 
  MMETSP1325-20131115|4157_1 129 MSYLH---ERGVVHRDLKPENLLLTsKNDDADiKVADFGFAK 167
                 44455...799**************94444445689999885 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.6e-05     0.061     106     165 ..     103     162 ..      92     169 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.6e-05
   PF10707.4 106 vsetLeellkedglta.alaeaLeefleallenrIvardlkpknivvgrrsegeeelvlvD 165
                 + e + ++ ++++l+a +  + + e++++l e ++v rdlkp+n++++ ++++  ++ + D
  MMETSP1325-20131115|4157_1 103 LFERIVKKSRYSELEArDCVKTILETMSYLHERGVVHRDLKPENLLLTSKNDDA-DIKVAD 162
                 4444555556666666666777888999*******************9999887.666665 PP

>> PF01633.15  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   3.4e-05     0.058      52     173 ..      50     167 ..      39     170 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.4e-05
                 --EEE--TTGGGSHHHHHHHHHHHHHHTT---SS--SS-HHHHHHHHH....-----TT--EE--TT----EE-HHHHHHHHHHHHHHHTT----EEEE-S------EEE..-------EE---TT-E CS
  PF01633.15  52 iesrtlstedlrepeilkkiakklaelHslelseskeskslwktiqkw....lnkeaqtkqkkeskkkqlklinledlekeleeleklleekespvvfCHnDlqegNill..nkeekklvlIDFEYas 173
                 i+   l++edl   +   +i+k+++  H + l         ++  +++    +  e    +++  kk++ +  +  d  k++ e++++l  +e +v   H Dl ++N+ll  ++++ ++++ DF +a+
  MMETSP1325-20131115|4157_1  50 IQKASLTQEDLIGLQQEIQIMKEINHRHVIRL------YEYFDDPKEYylvtELVEGGELFERIVKKSRYSELEARDCVKTILETMSYL--HERGV--VHRDLKPENLLLtsKNDDADIKVADFGFAK 167
                 56778888888888888899999999999988......444555555544443446677889999999999999999999999999999..44445..5***********777788899****98885 PP

>> PF09501.5  Probable sporulation protein (Bac_small_yrzI)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.4   7.7e-05      0.13      11      39 ..      49      77 ..      45      86 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.7e-05
   PF09501.5 11 TIqKrklSeaElereqqiekimdeikdrq 39
                +IqK +l++++l   qq  +im+ei  r 
  MMETSP1325-20131115|4157_1 49 VIQKASLTQEDLIGLQQEIQIMKEINHRH 77
                6************************9987 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   4.1e-05      0.07      79     141 ..      89     152 ..      40     178 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.1e-05
                 ETTEEEEE----TTCEGGCTTTS-...-HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESS CS
  PF01163.17  79 krnvlvmefigedgvaapklkdvel..eeaeelyeeileemrklykeaglvHaDLSeyNvlvded 141
                 k+  lv e+++  ++    +k+ ++   ea++++++ile+m  l  e g+vH DL   N+l++++
  MMETSP1325-20131115|4157_1  89 KEYYLVTELVEGGELFERIVKKSRYseLEARDCVKTILETMSYLH-ERGVVHRDLKPENLLLTSK 152
                 45578999999555555567777778789999*******887776.**************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.67
# Mc/sec: 1251.83
//
Query:       MMETSP1325-20131115|4160_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-21   75.5   0.0    5.4e-21   74.8   0.0    1.3  1  PF01922.12 SRP19 protein


Domain annotation for each model (and alignments):
>> PF01922.12  SRP19 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   0.0     4e-25   5.4e-21       1      95 []      60     155 ..      60     155 .. 0.95

  Alignments for each domain:
  == domain 1    score: 74.8 bits;  conditional E-value: 4e-25
                 EEE-CCCCBTTS-ST----S-CCC-BSS--HHHHHHHHHH----EEE-TS-TTCCCTTS----EEES.--..........--HHHHHHHHHHHHHHHH CS
  PF01922.12   1 iviYpaylDskltrseGRrvpkelaVenPtleeiaealkklglkvvveeekkyPrekfeeegrvrvelkee...avnekiktkkellkkiaekikelr 95 
                 i+i+p++++s++t +eGRrvp+++a+++P ++e++e+l  +++ +v+e+ k yPr+    +gr+rv l++e   ++n +++t++ ll k +e i++l+
  MMETSP1325-20131115|4160_1  60 ICIWPNNINSSKTLAEGRRVPRTHACDDPIVSEMSEVLTYFKFVHVIEPYKVYPRD--IIPGRIRVRLTDEndePCNADLPTRRALLMKMGELIPKLK 155
                 79******************************************************..6788888888887789********************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.61
# Mc/sec: 769.98
//
Query:       MMETSP1325-20131115|4162_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 327.92
//
Query:       MMETSP1325-20131115|4164_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.2e-09   35.1   0.0    8.6e-09   34.9   0.0    1.1  1  PF06384.6 Beta-catenin-interacting protein ICAT
  ------ inclusion threshold ------
      0.052   13.2   0.2      0.073   12.7   0.2    1.2  1  PF05120.7 Gas vesicle protein G


Domain annotation for each model (and alignments):
>> PF06384.6  Beta-catenin-interacting protein ICAT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.0   1.3e-12   8.6e-09       2      76 ..       7      83 ..       6      85 .. 0.90

  Alignments for each domain:
  == domain 1    score: 34.9 bits;  conditional E-value: 1.3e-12
   PF06384.6  2 dRdlavGklsedvYiqQkveiLlaLkKlgekLtpeeeaFLsenagaalsqfekvse.nlgsgdk..vlalasseveda 76
                + +l++ ++++d +  Q++eiL  Lk lge L p+e a Ls+  g  +s f k s+ ++g  ++  +la a+ +v  a
  MMETSP1325-20131115|4164_1  7 QEELKLKRIPKDTFDSQALEILNGLKNLGEVLAPDELA-LSQAIGGGISGFTKTSDtHVGVAAEggLLAAAAADVSAA 83
                67889999**************************9998.8999999*********98788777788******999866 PP

>> PF05120.7  Gas vesicle protein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   1.1e-05     0.073      36      70 ..       2      36 ..       1      44 [. 0.90

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.1e-05
   PF05120.7 36 eLaeLqleleaGeIseeeFdrrEeeLLdrlealkr 70
                +L +Lq el++  I++++Fd +  e+L+ l+ l +
  MMETSP1325-20131115|4164_1  2 KLGKLQEELKLKRIPKDTFDSQALEILNGLKNLGE 36
                6889**************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.65
# Mc/sec: 346.55
//
Query:       MMETSP1325-20131115|4161_1  [L=622]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-57  191.7   0.0    1.3e-56  191.3   0.0    1.2  1  PF00667.15 FAD binding domain
    7.5e-39  132.8   3.6    1.4e-38  131.9   2.5    1.5  1  PF00258.20 Flavodoxin
    8.8e-18   64.7   0.0    2.3e-17   63.3   0.0    1.8  1  PF00175.16 Oxidoreductase NAD-binding domain
  ------ inclusion threshold ------
      0.037   13.8   0.0       0.08   12.7   0.0    1.5  1  PF07972.6  NrdI Flavodoxin like


Domain annotation for each model (and alignments):
>> PF00667.15  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.3   0.0   3.9e-60   1.3e-56       9     219 .]     214     423 ..     206     423 .. 0.97

  Alignments for each domain:
  == domain 1    score: 191.3 bits;  conditional E-value: 3.9e-60
  PF00667.15   9 flakvlknreLtkpsseRsvihleldisdsglkYqtGdhlgvypsNneelVeellellgldpdevvslkaldekslkkeprlepttlrealkyyleitgpptkqllealaelaseeeekqeLeaLvsdegkeeykelklnkartllevl.eefpsvklplefllellprLqpRyYSISSsskvepnevhltvvvveyetgegrirkGvassy 219
                 + akv++nreL + +   s++h+eldi d g++Y t d  +v p+N+++ V +l + lg dpd v+++++++  s kk+ +++p+++r alk + +i g+p++  l+ ++++ +++e++q L a+ ++ g+++yke   ++ r+l +v+   +ps ++pl ++++l+prLqpRyY ISSss v+p+++hltv+v e  +++g+ ++Gv+s++
  MMETSP1325-20131115|4161_1 214 VDAKVVVNRELRTTKDPGSTRHIELDIHDAGVEYLTADNCAVLPENDDASVTKLAKALGFDPDLVFKMEPKE--SGKKHLFPTPCSVRVALKSFCDIHGIPRRATLKDFVPFVKNPEHRQSLVAMTTKDGRQQYKEVIEDQGRSLFDVIvSMYPSFQIPLAHFMALVPRLQPRYYTISSSSTVHPKRIHLTVSVIEQAKPDGGVFHGVCSTF 423
                 5689********************************************************************..56*********************************************************************99862679*********************************************************98 PP

>> PF00258.20  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.9   2.5   4.1e-42   1.4e-38       1     143 []      10     147 ..      10     147 .. 0.99

  Alignments for each domain:
  == domain 1    score: 131.9 bits;  conditional E-value: 4.1e-42
                 EEEE-----HHHHHHHHHHHHHHCTCEEEEEEGGGTTTCHHHHHHHSEEEEEEEBCTCTSBEETTCHHHTTCHHHHHHGGGGSCGTT-EEEEEECCHTTSSTTTTTHHHHHHHHHHCCEEEESE-EE-BTTTHGGHHHHHHHH CS
  PF00258.20   1 ilYgSetGnteklAkalaeglgehgfnakvvslddydesleeiehedlllvvtsTfgnGeppengesfaeellelkgkeeeagdlsnvrfavfglGdsaypkFcaagkaldekleelGaerllellegdednqegqeeafraw 143
                 i++gS+tG++e +A++la ++++hgf+a+  +l+d++es  e+ + + +l++++T+g+Gep++n++ ++ +++++ + e++a+ ls++++avfglG+ +y++F+a+gk+ de le+lGa+r+++l+ gd+d+  +++e+f++w
  MMETSP1325-20131115|4161_1  10 IFFGSQTGTAEGFAQQLASEAKKHGFDARAADLEDFEES--EMAETSRALFMMATYGEGEPTDNAA-SFMKWVQNGEGELSADTLSGMQYAVFGLGNTQYEHFNAIGKMTDESLEKLGARRIFKLGLGDDDQ--ALDEDFEKW 147
                 9************************************88..*************************.*********99******************************************************..********* PP

>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.3   0.0   6.9e-21   2.3e-17       1     107 [.     474     585 ..     474     587 .. 0.87

  Alignments for each domain:
  == domain 1    score: 63.3 bits;  conditional E-value: 6.9e-21
                 EEE-----HHHHHHHHHHHCC.H...CCCEEEEEEEESSGG.GSTTHHHHHHHHHHSTTEEEEEECTTTTCSSSSBB--HHHHHHH..CHHH..HHHCTTTEEEEEE-HHHHHHHH CS
  PF00175.16   1 miaGGtGiaplrsvlkalled.e...detkvvlvyGvrtee.dlllreeleelakklpgrlkvvavsrtddgwkggkgyvtdalle..elle..eeidkeetdvyvCGppgMakav 107
                 +i++GtGiap+r +l+++ ++ +   d ++ +l++G+++++ d+l+++ele+++k+   + +++a+sr+ ++    k+yv++++++  ++ e  + ++ +++++yvCG   M  +v
  MMETSP1325-20131115|4161_1 474 LIGPGTGIAPMRALLQERDAQrQnglDVGPSILYFGCKKRDvDFLYEDELESFRKSGALTALHLAFSRETKE----KVYVQHVMARpdNAKEiwQLVNCQGAHIYVCGGTSMGADV 585
                 79****************8886479999*************************8777667778888999999....8*******8754444499999***********99997776 PP

>> PF07972.6  NrdI Flavodoxin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.3e-05      0.08       1      85 [.      10     106 ..      10     127 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.3e-05
   PF07972.6   1 vvysSlsgntkrfvkklglyaeeqriple......eaeeeleveepfvlivptygegee.kka......vpkqvirFlneeknrkllrgviasGNrnf 85 
                 + + S++g+ + f+++l+ +a++  ++ +       +e+e+ +++  + ++ tygege  ++a      v +  +  l++++ + +  +v + GN+++
  MMETSP1325-20131115|4161_1  10 IFFGSQTGTAEGFAQQLASEAKKHGFDARaadledFEESEMAETSRALFMMATYGEGEPtDNAasfmkwVQNG-EGELSADTLSGMQYAVFGLGNTQY 106
                 6899***************9999999998776654233338888899999*******9654334533322222.222444445555555566666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (622 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.00u 0.35s 00:00:01.35 Elapsed: 00:00:00.69
# Mc/sec: 2160.19
//
Query:       MMETSP1325-20131115|4159_1  [L=514]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-24   86.5   0.0    4.8e-19   68.7   0.0    2.7  2  PF00005.22 ABC transporter
    5.5e-11   42.8   0.0    0.00051   19.9   0.0    3.3  3  PF13304.1  AAA domain
    6.6e-07   28.6   0.1      0.015   14.4   0.0    3.1  2  PF02463.14 RecF/RecN/SMC N terminal domain
    1.9e-06   27.5   0.0       0.11   12.2   0.0    3.0  2  PF13558.1  Putative exonuclease SbcCD, C subunit
     0.0033   17.2   0.0       0.16   11.8   0.0    2.6  2  PF01926.18 50S ribosome-binding GTPase
     0.0034   16.3   0.0       0.34    9.7   0.0    2.2  2  PF13175.1  AAA ATPase domain
     0.0049   15.9   0.0       0.01   14.9   0.0    1.4  1  PF03193.11 Protein of unknown function, DUF258
  ------ inclusion threshold ------
      0.015   14.8   0.1       0.24   10.9   0.0    2.4  2  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
      0.015   15.0   0.0      0.028   14.2   0.0    1.4  1  PF13671.1  AAA domain
       0.02   14.2   0.0      0.044   13.1   0.0    1.5  1  PF13555.1  P-loop containing region of AAA domain
      0.047   13.6   0.0       0.13   12.2   0.0    1.7  1  PF13401.1  AAA domain
        0.1   13.0   0.0        0.2   12.0   0.0    1.6  1  PF08477.8  Miro-like protein
       0.11   11.5   0.0       0.24   10.4   0.0    1.5  1  PF12846.2  AAA-like domain
       0.12   12.5   0.0       0.59   10.3   0.0    2.1  1  PF13191.1  AAA ATPase domain
       0.16   12.1   0.0       0.16   12.1   0.0    2.3  3  PF13476.1  AAA domain
       0.21   11.3   0.1       0.21   11.3   0.1    2.9  2  PF12848.2  ABC transporter


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.3e-05      0.02      97     118 .]       2      23 ..       1      23 [. 0.96
   2 !   68.7   0.0   5.6e-22   4.8e-19       1     118 []     171     388 ..     171     388 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  97 rvalArallkkpklllLDEPtn 118
                 +++l ra+l +p++++LDEPtn
  MMETSP1325-20131115|4159_1   2 KLSLSRAMLYEPQIMMLDEPTN 23 
                 899******************8 PP

  == domain 2    score: 68.7 bits;  conditional E-value: 5.6e-22
                 HHHHHHHTTSS------EEE-..--BGGGB-HHHHHEEEE-------...--BH....................HHHHH----S--........................................................................................-HHHHHHHHHH---HH.HH------------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxx....................xxxxxxxxxxxx........................................................................................xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievdndrkdlesdkleklrigyipqdpllf..peltv....................renldmakeekk........................................................................................tdkrieevlekvglde.lldksrvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 STL+k+l g  +p++ge++ +            +lr++y++q+++++  ++l+v                    +++l+ + ee+k                                                                                        t+  i+e+l+++gl++ + +  ++ +LSgGqk++v+   a+++ p+ll+LDEPtn
  MMETSP1325-20131115|4159_1 171 STLVKCLVGDHEPQSGEVWKH-----------PHLRMAYVSQHAFAHveNHLEVspveyiqwrysggvdkeqeqKDTLQLEPEEEKritvrdpelakaginqiagimgrrkrhnefeyecwyvgstkdsavfiplnelenmvemgwhgkelgkmiqamdeklaqqnsivaqrqlTTGGIQEHLDAFGLEAeFGTYGKIVGLSGGQKVKVVMGSAMWNCPHLLVLDEPTN 388
                 9********************...........3456************999999999999999999988877774444444333337777777777888888888888888888888888888888888888888888899999999999999999999999999999999999****************6666699*******************************8 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   5.9e-07   0.00051     258     303 .]      13      56 ..       3      56 .. 0.90
   2 !   13.4   0.0   5.7e-05     0.049       5      19 ..     163     177 ..     160     184 .. 0.91
   3 ?    5.8   0.0     0.012        11     219     300 ..     331     417 ..     222     419 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 5.9e-07
   PF13304.1 258 gsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHSpvlld 303
                 + + ++DEp n+++ k + +l++ l+ l++  +++++++H++ +ld
  MMETSP1325-20131115|4159_1  13 PQIMMLDEPTNHMDVKKVAELVNYLNGLTE--VTCLIVSHDTKFLD 56 
                 3899**************************..*********98886 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 5.7e-05
   PF13304.1   5 iGpNgsGKSnlLkal 19 
                 +GpNg+GKS+l k+l
  MMETSP1325-20131115|4159_1 163 VGPNGAGKSTLVKCL 177
                 8************98 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.012
   PF13304.1 219 k...........dviflkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHSpv 300
                 +           d + l+ + g +  +  lS G+k    + +a ++ +    +l++DEp n+L+ + l +++  +k  +     +++ TH+ +
  MMETSP1325-20131115|4159_1 331 RqlttggiqehlDAFGLEAEFGTYGKIVGLSGGQKVKVVMGSAMWNCP---HLLVLDEPTNYLDRESLGAMAAAIKIYKG---GVLLITHNSE 417
                 155555666666777777777777778888888888877777778777...89************999999988877766...8999999865 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0013       1.1     161     205 ..      15      58 ..       3      71 .. 0.84
   2 !   14.4   0.0   1.7e-05     0.015      27     202 ..     160     419 ..     150     426 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0013
                 EEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 161 lyllDeidaaLDeknvskvaellkeksknaQfivislreemleka 205
                 +++lDe   ++D k+v++++++l+  + ++  +++s+++++l ++
  MMETSP1325-20131115|4159_1  15 IMMLDEPTNHMDVKKVAELVNYLNGLT-EVTCLIVSHDTKFLDNV 58 
                 789*********************999.77788999999988765 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.7e-05
                 EEE--------HHHHHHHHHH------.-------TTSS----------EEEEEEEEE----E.......EEEEEEEE----EEEEE---EE-HHHHHH.HHHCTT--TT................................................................................................G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14  27 taivGpNGSGKsnvldAilFvLGeksakklrseklsdlihkskskakvksaeveitfdnedkelvieeeevsitrrvkrkgeseykingkevtkkevae.llesagiske................................................................................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreeml 202
                  a vGpNG+GKs ++  +    G+++ ++    k  +l  +    ++  +a+ve +++ +  e    + ++s  + ++++++ + +++ +e ++  v++  l++agi++                                                                                                  LSgG+k    + +++   + +   l +lDe    LD +   ++a  +k  +    ++ i++++e+ 
  MMETSP1325-20131115|4159_1 160 VACVGPNGAGKSTLVKCL---VGDHEPQSGEVWKHPHLRMA--YVSQHAFAHVENHLEVSPVE--YIQWRYSGGVDKEQEQKDTLQLEPEEEKRITVRDpELAKAGINQIagimgrrkrhnefeyecwyvgstkdsavfiplnelenmvemgwhgkelgkmiqamdeklaqqnsivaqrqlttggiqehldafgleaefgtygkivGLSGGQK----VKVVMGSAMWNCPHLLVLDEPTNYLDRESLGAMAAAIKIYK--GGVLLITHNSEFS 419
                 5789************99...78766644444444444333..34444555555554333333..2222233333333333344444444444433332256666666556666666668889999999999999**********************************************************************99*****9....567788888999999**********************9887..7788888888775 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00013      0.11      63      89 ..      12      38 ..       3      39 .. 0.88
   2 !   11.7   0.0   0.00019      0.16      29      88 ..     356     402 ..     338     404 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00013
   PF13558.1 63 sirlvfLDEAFsklDeeniasllellr 89
                ++++++LDE+++ +D +++a+l+++l+
  MMETSP1325-20131115|4159_1 12 EPQIMMLDEPTNHMDVKKVAELVNYLN 38
                5899******************99985 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00019
   PF13558.1  29 rtgtlSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEAFsklDeeniasllell 88 
                 ++ +lSGG+k   v ++++ A+           +++ l++LDE+++ lD e++ ++++++
  MMETSP1325-20131115|4159_1 356 KIVGLSGGQK---VKVVMGSAMW----------NCPHLLVLDEPTNYLDRESLGAMAAAI 402
                 5556677777...5555554433..........36889****************999876 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.15   1.3e+02      18      42 ..     118     141 ..     112     153 .. 0.73
   2 !   11.8   0.0   0.00018      0.16       1      23 [.     159     181 ..     159     238 .. 0.79

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.15
                 HHHCSTCTEETS-TT-SSSESEEEE CS
  PF01926.18  18 aLtgekaakvsdypgtTrditenev 42 
                 a+ +  + +v +ypgtT+di  nev
  MMETSP1325-20131115|4159_1 118 AIAK-MQDIVFAYPGTTKDIDGNEV 141
                 4543.356899*********77765 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00018
                 EEEEE--TT---HHHHHHHHCST CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgek 23 
                 +va vG   +GKStL++ L+g+ 
  MMETSP1325-20131115|4159_1 159 RVACVGPNGAGKSTLVKCLVGDH 181
                 699****************9743 PP

>> PF13175.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0004      0.34     372     414 ..      15      54 ..       5      55 .. 0.90
   2 ?    4.4   0.0     0.016        14      26      43 ..     161     182 ..     123     248 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0004
   PF13175.1 372 IlliDEPeahlhptlqkellefLkelakknniqiiitTHsphl 414
                 I ++DEP  h++++   el ++L+ l+    ++ +i +H++++
  MMETSP1325-20131115|4159_1  15 IMMLDEPTNHMDVKKVAELVNYLNGLTE---VTCLIVSHDTKF 54 
                 999************************9...999999999988 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.016
   PF13175.1  26 viiGeNgsGKttILeal....e 43 
                   +G Ng+GK+t+ ++l    e
  MMETSP1325-20131115|4159_1 161 ACVGPNGAGKSTLVKCLvgdhE 182
                 679*************966540 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.2e-05      0.01      38      68 ..     160     190 ..     150     201 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.2e-05
                 EEEE-------HHHHHHH--------S---- CS
  PF03193.11  38 svlvGqSGvGKSsLinallpeldlkvgevse 68 
                 ++ vG+ G+GKS+L++ l+++++ + gev +
  MMETSP1325-20131115|4159_1 160 VACVGPNGAGKSTLVKCLVGDHEPQSGEVWK 190
                 5789******************999999866 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00028      0.24       2      21 ..     159     178 ..     158     194 .. 0.89
   2 ?    1.2   0.0      0.28   2.4e+02      45      82 ..     428     464 ..     420     510 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00028
                 EEEEE-------HHHHHHHH CS
   PF03205.9   2 ivavvGpkdsGKTtlieklv 21 
                 +va+vGp + GK+tl++ lv
  MMETSP1325-20131115|4159_1 159 RVACVGPNGAGKSTLVKCLV 178
                 79**************9886 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.28
                 S----TTHHH.H----EEEEE-SSEEEEEEE-SSS---- CS
   PF03205.9  45 dkpGkDtwrl.kagadlvlvsieeplavvtgfllekead 82 
                 ++pG+   +l  +gad ++++++ ++a ++++ l +  d
  MMETSP1325-20131115|4159_1 428 TCPGN--GKLeISGADWMIAAEKARAAAEKKAKLLEGFD 464
                 78888..88988999999999999777777665544444 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.3e-05     0.028       2      38 ..     160     199 ..     160     229 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.3e-05
   PF13671.1   2 vllvGlpGsGKstlaerllkklg...yvrlsqdtlrkrlf 38 
                 v +vG+ G+GKstl++ l+ ++    +++   + lr +  
  MMETSP1325-20131115|4159_1 160 VACVGPNGAGKSTLVKCLVGDHEpqsGEVWKHPHLRMAYV 199
                 679**************98776555677777777766654 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   5.2e-05     0.044      26      40 ..     160     174 ..     147     179 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 5.2e-05
   PF13555.1  26 tlltGasGsGKSTll 40 
                 ++ +G++G+GKSTl+
  MMETSP1325-20131115|4159_1 160 VACVGPNGAGKSTLV 174
                 6779**********8 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00016      0.13       7      29 ..     160     182 ..     155     215 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00016
   PF13401.1   7 lvvtGesGvGKTtllrrlarqld 29 
                 ++++G+ G+GK+tl++ l+ +++
  MMETSP1325-20131115|4159_1 160 VACVGPNGAGKSTLVKCLVGDHE 182
                 68**************9998764 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00023       0.2       1      25 [.     159     183 ..     159     240 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00023
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefp 25 
                 +v+ vG  g+GKs+l++ lvg+  p
  MMETSP1325-20131115|4159_1 159 RVACVGPNGAGKSTLVKCLVGDHEP 183
                 7899*****************9999 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00028      0.24       5      24 ..     161     180 ..     159     188 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00028
   PF12846.2   5 lilGppGsGKSvllkklvlq 24 
                 +++Gp G+GKS+l+k lv +
  MMETSP1325-20131115|4159_1 161 ACVGPNGAGKSTLVKCLVGD 180
                 789*************9875 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00069      0.59      26      90 ..     160     219 ..     149     412 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00069
   PF13191.1  26 llvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrnlpysaiiqa.lrellrqlltelaael 90 
                 +  +Gp G GKS+L+++     l  + + ++g ++ +   l+++++ q  + ++ ++l    ++ +
  MMETSP1325-20131115|4159_1 160 VACVGPNGAGKSTLVKC-----LVGDHEPQSGEVWKHPH-LRMAYVSQHaFAHVENHLEVSPVEYI 219
                 6679************9.....54444445554444443.34555555555555555555555555 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00019      0.16      25      39 ..     163     177 ..     160     179 .. 0.91
   2 ?   -2.8   0.0       6.8   5.8e+03      84      84 ..     246     246 ..     214     332 .. 0.59
   3 ?   -0.6   0.3       1.4   1.2e+03     150     168 ..     460     482 ..     425     509 .. 0.47

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00019
   PF13476.1  25 tGpNGsGKTTildAi 39 
                 +GpNG+GK+T+ +++
  MMETSP1325-20131115|4159_1 163 VGPNGAGKSTLVKCL 177
                 7**********9997 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 6.8
   PF13476.1  84 g 84 
                 +
  MMETSP1325-20131115|4159_1 246 R 246
                 1 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 1.4
   PF13476.1 150 l....kekkkrleelekeleele 168
                 l    ++k+++l+++ +++e++ 
  MMETSP1325-20131115|4159_1 460 LegfdADKEDELDAFGNKIEKAA 482
                 12333344444444444444432 PP

>> PF12848.2  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00025      0.21       2      25 ..      64      87 ..      63      91 .. 0.88
   2 ?   -0.6   2.9       1.3   1.1e+03      19      79 ..     443     503 ..     440     508 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00025
   PF12848.2  2 elengklteYkGnYseyleqkeer 25
                + e  kl +Y+Gn s+++eqk e 
  MMETSP1325-20131115|4159_1 64 HYETRKLVSYHGNLSAFVEQKPEA 87
                67889****************876 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 1.3
   PF12848.2  19 leqkeerleqqekayekqqkeikkleefIdrfrakaskakqaqsrekalekmeriekpeee 79 
                 +   e+ ++++ek+ +  +   ++ e+  d f++k  ka+ a   +k+l + e++   +++
  MMETSP1325-20131115|4159_1 443 MIAAEKARAAAEKKAKLLEGFDADKEDELDAFGNKIEKAAPAGGDKKKLSRKEKLALKKKK 503
                 5566777777777777777777888888999999999***************999877433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       606  (0.0443242); expected 273.4 (0.02)
Passed bias filter:                      460  (0.0336454); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 1.01u 0.38s 00:00:01.39 Elapsed: 00:00:00.61
# Mc/sec: 2019.23
//
Query:       MMETSP1325-20131115|4166_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-37  127.4   0.0    6.1e-37  127.3   0.0    1.0  1  PF00206.15 Lyase


Domain annotation for each model (and alignments):
>> PF00206.15  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.3   0.0   4.5e-41   6.1e-37      20     185 ..       5     158 .]       1     158 [] 0.94

  Alignments for each domain:
  == domain 1    score: 127.3 bits;  conditional E-value: 4.5e-41
                 HHGGGHHHHHBHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHGGGHHHBSTHCSHHHHHHHHHHHHHHHHHTHCCGIIIHTTTT--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT-EEEEEBTTBEESEEEHHHHHHHHHHHHHHHHHH CS
  PF00206.15  20 enfrlseedikalaalkkaaakanvelkeeaaaiikaldevleegklddafvlkviqegsgtavnmnlneviaellgqkvepndkvhtgqSsnDqvpTalrlalkkalsekLlpaleqLidalkekakefkdvvkiGrThlqdAtPvtlgqelsayaealerdler 185
                 +++  +++d k+++a++ka  ++ ++   e  +i+++l++v++e+ ++ +f+lk  +e+++ta++++l+e+i+          +k+htg+S+nDqv+T++r++++ ++  k+  +l  Li+a+++  +++ d + +G Thlq+A+Pv+++++l ++a+al rd +r
  MMETSP1325-20131115|4166_1   5 FDKVFWDVDLKGSIAYAKASPTLTAD---EKTQIVAGLEQVRAEWAAG-TFELKPGDEDIHTANERRLTELIG-------PNGGKLHTGRSRNDQVATDVRMWMRLEV-WKITLDLLGLIEAMADMGEKHVDLLTAGVTHLQPAQPVRFSHWLNSHAAALMRDAQR 158
                 67888999999999999998876655...599****************.************************.......8899************************.56****************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 688.41
//
Query:       MMETSP1325-20131115|4168_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 531.99
//
Query:       MMETSP1325-20131115|4165_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-24   81.9   4.8    1.6e-09   37.0   0.0    4.5  4  PF00023.25 Ankyrin repeat
    3.8e-21   75.1   6.6    9.6e-13   48.1   0.1    3.2  3  PF12796.2  Ankyrin repeats (3 copies)
    4.8e-18   65.0   1.9    2.5e-06   27.7   0.0    3.8  4  PF13637.1  Ankyrin repeats (many copies)
    3.2e-14   52.4   1.6    9.9e-10   38.2   0.0    3.4  3  PF13857.1  Ankyrin repeats (many copies)
    2.2e-13   48.9   1.9    9.4e-07   28.3   0.0    4.4  4  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
       0.11   12.4   2.5       0.14   12.0   0.8    1.8  2  PF13590.1  Domain of unknown function (DUF4136)
       0.35   10.6   9.5       0.54   10.0   6.6    1.3  1  PF01034.15 Syndecan domain


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.5     3e-05     0.058       9      32 ..       3      26 ..       2      27 .. 0.93
   2 !    7.9   0.0    0.0013       2.4       5      26 ..      32      53 ..      31      56 .. 0.94
   3 !   22.5   0.0     3e-08   5.9e-05       1      33 []     172     204 ..     172     204 .. 0.96
   4 !   37.0   0.0     8e-13   1.6e-09       2      32 ..     206     238 ..     205     239 .. 0.97

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3e-05
                HHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  9 AalrgnlevvklLlsqGAdlnaqd 32
                Aa+ +++ ++  Lls+GAdl a++
  MMETSP1325-20131115|4165_1  3 AAEGDHAACCHALLSAGADLLATN 26
                89999****************998 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0013
                HHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25  5 PLHlAalrgnlevvklLlsqGA 26
                +L +A+l+g+   +++Ll++ A
  MMETSP1325-20131115|4165_1 32 ALFIASLKGHDTTLRCLLDHMA 53
                799*****************98 PP

  == domain 3    score: 22.5 bits;  conditional E-value: 3e-08
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 dGfTPLH A+lr   + +  Ll++ A +  +++
  MMETSP1325-20131115|4165_1 172 DGFTPLHAAVLRKKESTLATLLKASAPVSSRNK 204
                 8***************************99986 PP

  == domain 4    score: 37.0 bits;  conditional E-value: 8e-13
                 SCBHHHHHHHTT..HHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrg..nlevvklLlsqGAdlnaqd 32 
                 G+T+LHlAa+ g  +l  v+lL+++GAd+na+d
  MMETSP1325-20131115|4165_1 206 GQTALHLAARGGtgSLPLVELLIEYGADINARD 238
                 9*******************************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.7   8.9e-08   0.00017       4      54 ..       3      57 ..       1      69 [. 0.77
   2 !   48.1   0.1   4.9e-16   9.6e-13      26      89 .]     173     238 ..     139     238 .. 0.85
   3 !   21.6   0.0   9.3e-08   0.00018      37      66 ..     219     248 ..     217     283 .. 0.76

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 8.9e-08
   PF12796.2  4 AaengnlelvklLlekgadvdlget......pLhlAaeagnleivklLleagadvna 54
                Aae +++ ++  Ll++gad+    t      +L++A+ +g+  ++++Ll++ a  + 
  MMETSP1325-20131115|4165_1  3 AAEGDHAACCHALLSAGADLL--ATnhrlegALFIASLKGHDTTLRCLLDHMAKRCR 57
                788888889999999999888..5555677799999999999999999988877654 PP

  == domain 2    score: 48.1 bits;  conditional E-value: 4.9e-16
   PF12796.2  26 getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvr..nghlelvklLlekgadvnlrd 89 
                 g tpLh+A+ + +  ++  Ll+a a v +++k+g+t+LhlA+r  +g+l+lv+lL+e+gad+n+rd
  MMETSP1325-20131115|4165_1 173 GFTPLHAAVLRKKESTLATLLKASAPVSSRNKSGQTALHLAARggTGSLPLVELLIEYGADINARD 238
                 556****************************************88899***************997 PP

  == domain 3    score: 21.6 bits;  conditional E-value: 9.3e-08
   PF12796.2  37 gnleivklLleagadvnakdkegntpLhlA 66 
                 g+l  v+lL+e+gad+na+d+ g t+L + 
  MMETSP1325-20131115|4165_1 219 GSLPLVELLIEYGADINARDETGATALDVS 248
                 8999**********************9873 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.2    0.0016       3.1       9      52 ..       4      47 ..       1      49 [. 0.79
   2 !    9.5   0.0   0.00064       1.3      31      46 ..     170     185 ..     165     189 .. 0.84
   3 !   27.7   0.0   1.3e-09   2.5e-06       2      45 ..     174     217 ..     173     219 .. 0.96
   4 !   25.9   0.0   4.8e-09   9.3e-06      12      44 ..     219     251 ..     218     256 .. 0.91

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0016
   PF13637.1  9 aisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilkl 52
                a   +  +++ Ll+ g+d+ +t+ + + aL iA l+g+   l++
  MMETSP1325-20131115|4165_1  4 AEGDHAACCHALLSAGADLLATNHRLEGALFIASLKGHDTTLRC 47
                55555567999*************************99444444 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00064
   PF13637.1  31 desGntaLhiAalrgn 46 
                 d++G+t+Lh A+lr  
  MMETSP1325-20131115|4165_1 170 DGDGFTPLHAAVLRKK 185
                 99**********9865 PP

  == domain 3    score: 27.7 bits;  conditional E-value: 1.3e-09
   PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrg 45 
                  t+Lh a+    + +++ Ll+  + +  +++sG taLh+Aa++g
  MMETSP1325-20131115|4165_1 174 FTPLHAAVLRKKESTLATLLKASAPVSSRNKSGQTALHLAARGG 217
                 599**************************************987 PP

  == domain 4    score: 25.9 bits;  conditional E-value: 4.8e-09
   PF13637.1  12 grlelvklLlekgidinrtdesGntaLhiAalr 44 
                 g l+lv+lL+e+g+din++de G taL++ + +
  MMETSP1325-20131115|4165_1 219 GSLPLVELLIEYGADINARDETGATALDVSLGH 251
                 789*************************99876 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.5     0.039        77      23      56 .]       3      36 ..       1      36 [. 0.92
   2 !    7.6   0.0    0.0021       4.1      12      26 ..     169     183 ..     166     189 .. 0.87
   3 !   38.2   0.0   5.1e-13   9.9e-10       8      55 ..     198     247 ..     192     248 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.039
   PF13857.1 23 AakggalevvrlLlapgadlnlrdsdgltaldlA 56
                Aa+g ++ ++  Ll +gadl +++ + + al +A
  MMETSP1325-20131115|4165_1  3 AAEGDHAACCHALLSAGADLLATNHRLEGALFIA 36
                99**********************9999998887 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0021
   PF13857.1  12 tdeggntpLhlAakg 26 
                 +d+ g+tpLh A+ +
  MMETSP1325-20131115|4165_1 169 SDGDGFTPLHAAVLR 183
                 7999********975 PP

  == domain 3    score: 38.2 bits;  conditional E-value: 5.1e-13
   PF13857.1   8 dvnatdeggntpLhlAak..ggalevvrlLlapgadlnlrdsdgltaldl 55 
                  v +++++g+t+LhlAa+   g+l++v+lL+++gad+n+rd+ g tald+
  MMETSP1325-20131115|4165_1 198 PVSSRNKSGQTALHLAARggTGSLPLVELLIEYGADINARDETGATALDV 247
                 55578999**********8889**************************96 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.022        44       9      29 ..       3      23 ..       1      24 [. 0.85
   2 ?    2.3   0.0      0.12   2.4e+02       5      26 ..      32      53 ..      29      55 .. 0.90
   3 !    9.5   0.0   0.00057       1.1       1      27 [.     172     198 ..     172     200 .. 0.88
   4 !   28.3   0.0   4.8e-10   9.4e-07       2      30 .]     206     236 ..     205     236 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.022
   PF13606.1  9 AasngrielveaLlengadin 29
                Aa+  + + ++aLl++gad+ 
  MMETSP1325-20131115|4165_1  3 AAEGDHAACCHALLSAGADLL 23
                7777889999*********86 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.12
   PF13606.1  5 pLhlAasngrielveaLlenga 26
                +L++A  +g+   ++ Ll++ a
  MMETSP1325-20131115|4165_1 32 ALFIASLKGHDTTLRCLLDHMA 53
                7999**************9976 PP

  == domain 3    score: 9.5 bits;  conditional E-value: 0.00057
   PF13606.1   1 nGnTpLhlAasngrielveaLlengad 27 
                 +G TpLh A+ +++ + +  Ll++ a 
  MMETSP1325-20131115|4165_1 172 DGFTPLHAAVLRKKESTLATLLKASAP 198
                 79**************99999998765 PP

  == domain 4    score: 28.3 bits;  conditional E-value: 4.8e-10
   PF13606.1   2 GnTpLhlAas..ngrielveaLlengadina 30 
                 G+T+LhlAa+   g++ lve+L+e+gadina
  MMETSP1325-20131115|4165_1 206 GQTALHLAARggTGSLPLVELLIEYGADINA 236
                 9*********55569**************97 PP

>> PF13590.1  Domain of unknown function (DUF4136)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.8   7.4e-05      0.14      70     126 ..     114     172 ..      92     184 .. 0.70
   2 ?   -1.6   0.0       1.2   2.3e+03      23      56 ..     264     295 ..     256     301 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.4e-05
   PF13590.1  70 vkekqdvytn..ygygwgwgpgwggpvpvvrsyeegtLvidivdaktgklvWrgsasge 126
                 + +++++ ++   ++g+g g+g+ g + + +s++++t +++i+ ++ +k +W+g+  g+
  MMETSP1325-20131115|4165_1 114 TTTTTTIADEtrTEVGFGGGGGGAGLMETGTSVRTETTTTQITTTNVSKSLWEGTSDGD 172
                 2222333333114555554444445588899************************9875 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.2
   PF13590.1  23 vdskldpaqandleaqriedavaaeLaakGftra 56 
                 +++  ++a    le++  ++ v + +++kG +r 
  MMETSP1325-20131115|4165_1 264 AAD--KAALVAALEERGAKRGVVRPMSRKGKRRH 295
                 333..57777788888888888888888887775 PP

>> PF01034.15  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   6.6   0.00028      0.54      76     152 ..      72     160 ..      45     214 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00028
  PF01034.15  76 hapkltetssspssetttaststktsstvsttttattsPsetateeatttvatetatevq..............saaepeqpttpatdedl 152
                  +p++++t+++p+ + + ++  +   +t++t  t+tt+ ++t+t+++ttt a+et tev               ++   e+ tt+ t++++
  MMETSP1325-20131115|4165_1  72 PPPPSARTKAPPKLNPLAVEWIPAFGATTTT--TTTTTTTTTTTTTTTTTIADETRTEVGfggggggaglmetgTSVRTETTTTQITTTNV 160
                 3445555555555555555555555554444..4444445555555555555666665669999998887655544444444444443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       647  (0.047323); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:00.72
# Mc/sec: 1045.08
//
Query:       MMETSP1325-20131115|4167_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.047   13.3   9.4      0.059   13.0   0.9    2.9  4  PF04859.7 Plant protein of unknown function (DUF641)
       0.05   13.2   5.9       0.39   10.4   0.0    2.9  3  PF12329.3 TATA element modulatory factor 1 DNA binding
      0.068   12.6  10.7       0.35   10.3   1.6    2.3  2  PF04156.9 IncA protein
       0.22    9.5   4.7        3.5    5.6   0.0    2.0  2  PF07902.6 gp58-like protein
       0.34   10.5   8.2        4.8    6.8   0.1    3.2  3  PF07544.8 RNA polymerase II transcription mediator complex subunit 9
       0.49   10.3  10.9        3.3    7.6   1.4    3.7  3  PF09304.5 Cortexillin I, coiled coil
        1.2    8.6   4.0        4.2    6.9   0.1    3.0  3  PF08286.6 Spc24 subunit of Ndc80
        2.1    8.2  11.6       0.27   11.1   0.4    3.0  3  PF10473.4 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
        3.3    7.6  12.6        4.9    7.0   5.3    2.4  2  PF03245.8 Bacteriophage lysis protein
        6.7    6.4   7.8        3.7    7.2   1.9    2.5  2  PF07439.6 Protein of unknown function (DUF1515)
        8.6    6.2  15.0         44    3.9   2.6    3.9  3  PF13863.1 Domain of unknown function (DUF4200)


Domain annotation for each model (and alignments):
>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.021        26      73     106 ..      12      52 ..       2      78 .. 0.74
   2 ?    0.0   0.1      0.47   5.8e+02      92     115 ..     102     125 ..      53     146 .. 0.57
   3 ?   -0.5   0.4      0.71   8.8e+02      79     106 ..     114     141 ..      91     166 .. 0.53
   4 ?   13.0   0.9   4.8e-05     0.059      52     110 ..     153     212 ..     150     221 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.021
   PF04859.7  73 s.......akdailaaeiqeqrsllktyeivvkkLeaelra 106
                 +       +k   ++ +i  qr+ + + e+vv ++++el++
  MMETSP1325-20131115|4167_1  12 DlmigelrKKLDSMQQTIVGQRKRIGDQESVVSRFKSELHE 52 
                 44444444666677888889999999999999999999876 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 0.47
   PF04859.7  92 tyeivvkkLeaelrakdseieelr 115
                 t  ++ +k+  +++a  +e ++++
  MMETSP1325-20131115|4167_1 102 TFTTLKEKFAMDVEAHSAENMRVM 125
                 333333345555555555544433 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.71
   PF04859.7  79 laaeiqeqrsllktyeivvkkLeaelra 106
                 ++a+  e+   ++++ +++++++++ +a
  MMETSP1325-20131115|4167_1 114 VEAHSAENMRVMHDNMSLIREINKQREA 141
                 3444444444444444444444444444 PP

  == domain 4    score: 13.0 bits;  conditional E-value: 4.8e-05
   PF04859.7  52 vaeLkkLselkrl.yrrkeakgsakdailaaeiqeqrsllktyeivvkkLeaelrakdse 110
                 +a L++L+  k+   +r+  +++ ++a++aae++ +r  +++  ++v +Lea l +++ e
  MMETSP1325-20131115|4167_1 153 IASLQRLRLAKSHqQLRSAGSAAGGTAAMAAEMESNRTRIQALRSAVMELEARLSQQQDE 212
                 5677777766644145666666699*****************************998877 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00031      0.39      28      71 ..       8      51 ..       2      53 .. 0.88
   2 ?   -1.3   0.1       1.4   1.7e+03      45      59 ..     142     156 ..     126     170 .. 0.53
   3 ?    4.8   0.2     0.017        21      30      57 ..     187     214 ..     179     221 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00031
   PF12329.3 28 elkhnntikkLrkknkelekeieelkkkleklekeleeleerlk 71
                ++++   i +Lrkk+  ++++i  + k++ ++e+ +++ +++l+
  MMETSP1325-20131115|4167_1  8 NAQLDLMIGELRKKLDSMQQTIVGQRKRIGDQESVVSRFKSELH 51
                666777899***************************99999986 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 1.4
   PF12329.3  45 lekeieelkkklekl 59 
                 +  +   l+ k+++l
  MMETSP1325-20131115|4167_1 142 NRGTKGVLQTKIASL 156
                 333444444444333 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.017
   PF12329.3  30 khnntikkLrkknkelekeieelkkkle 57 
                 ++++ i  Lr+ + ele+ +++++++  
  MMETSP1325-20131115|4167_1 187 SNRTRIQALRSAVMELEARLSQQQDEQR 214
                 5677788888888888888888876655 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   1.0    0.0024         3     141     188 ..      17      64 ..       2      79 .. 0.55
   2 ?   10.3   1.6   0.00029      0.35     107     181 ..     128     213 ..     118     222 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0024
   PF04156.9 141 elakeirelreeisdlkeevqelrselerlqedlqrlqeklaelqrll 188
                 el+k++  +++ i  ++ ++ +++s+++r + +l+++ + ++e +rl+
  MMETSP1325-20131115|4167_1  17 ELRKKLDSMQQTIVGQRKRIGDQESVVSRFKSELHECVQFIQEPERLR 64 
                 333333333333344445555555555555555555555555555554 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00029
   PF04156.9 107 leseledleedlellqeelksleerlesleesikelakeirelr.............eeisdlkeevqelrselerlqedlqrlqekl 181
                 + s ++++++++e +++ +  l++++ sl++   +lak++++lr             +e +  + ++q lrs++ +l+++l+++q ++
  MMETSP1325-20131115|4167_1 128 NMSLIREINKQREANRGTKGVLQTKIASLQR--LRLAKSHQQLRsagsaaggtaamaAEMESNRTRIQALRSAVMELEARLSQQQDEQ 213
                 5667778888888888888888888888876..5899999999999999999999999999999999999999999977776666543 PP

>> PF07902.6  gp58-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0028       3.5     263     336 ..      15      88 ..       3      96 .. 0.75
   2 ?    4.9   1.4    0.0044       5.5     231     295 ..     139     203 ..     100     220 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0028
   PF07902.6 263 iknregavsrvqqdldsyqrrlqdaednyssltqTvkGlqsevsdpnskiesrvtqLasl.ieqkvtrddvesii 336
                 i +    +  +qq++ + ++r++d e  +s+ +   +  ++ +++p+ +++s v+ L+++ ++++v + ++   +
  MMETSP1325-20131115|4167_1  15 IGELRKKLDSMQQTIVGQRKRIGDQESVVSRFKSELHECVQFIQEPE-RLRSCVAHLHKQhVHREVPHREMDPNV 88 
                 55556677888999999999999999999999999999999999988.888888888654367777777776655 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0044
   PF07902.6 231 trsnqgmRteleskisGLrstqqstakqisqeiknregavsrvqqdldsyqrrlqdaednysslt 295
                  ++n+g++ +l+ ki+ L+   +++++q  +    ++g    +  +++s + r+q+    + +l+
  MMETSP1325-20131115|4167_1 139 REANRGTKGVLQTKIASLQRLRLAKSHQQLRSAGSAAGGTAAMAAEMESNRTRIQALRSAVMELE 203
                 467899999**********************************************9887776665 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.2    0.0065       8.1      50      81 ..      18      49 ..       6      51 .. 0.85
   2 ?    6.6   0.9    0.0046       5.7      25      80 ..     148     204 ..     121     208 .. 0.63
   3 ?    6.8   0.1    0.0039       4.8      33      57 ..     188     213 ..     179     216 .. 0.78

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0065
   PF07544.8 50 isrsveeqeaeIeeleeqiarkrevLkklker 81
                + +  +++++ I   +++i  +++v +++k++
  MMETSP1325-20131115|4167_1 18 LRKKLDSMQQTIVGQRKRIGDQESVVSRFKSE 49
                67788899999999999999999999999987 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0046
   PF07544.8  25 dletatssl.khrlqkaraaveelpdisrsveeqeaeIeeleeqiarkrevLkklke 80 
                  l+t++ sl ++rl k ++++++    +  ++ + ae+e+ + +i+++r+   +l+ 
  MMETSP1325-20131115|4167_1 148 VLQTKIASLqRLRLAKSHQQLRSAGSAAGGTAAMAAEMESNRTRIQALRSAVMELEA 204
                 456777777567888888888887777777777777777777777777766665554 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0039
   PF07544.8  33 lkhrlqkaraaveelpd.isrsveeq 57 
                  ++r+q +r+av el+  +s+  +eq
  MMETSP1325-20131115|4167_1 188 NRTRIQALRSAVMELEArLSQQQDEQ 213
                 599***********887666666665 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.2     0.021        26      13      56 ..      17      77 ..       5     101 .. 0.47
   2 ?    1.3   0.3      0.25   3.1e+02      42      88 ..     106     153 ..      89     160 .. 0.61
   3 ?    7.6   1.4    0.0026       3.3      41      93 ..     160     211 ..     146     217 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.021
   PF09304.5 13 elankLagLersledekv...sqeeL..............akqkdeLksllasleaqkaer 56
                el+ kL ++++ + +++     qe +              +++ ++L+s  a l++q+ +r
  MMETSP1325-20131115|4167_1 17 ELRKKLDSMQQTIVGQRKrigDQESVvsrfkselhecvqfIQEPERLRSCVAHLHKQHVHR 77
                4444444444444333220111121132222222222222444444555555555555555 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.25
   PF09304.5  42 Lkslla.sleaqkaerekrlrelqakidellknlekeklakleLesrl 88 
                 Lk++ a  +ea++ae  + +++  + i e+ k+ e ++  k  L+++ 
  MMETSP1325-20131115|4167_1 106 LKEKFAmDVEAHSAENMRVMHDNMSLIREINKQREANRGTKGVLQTKI 153
                 444433135666667777777777777777777777776666666554 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0026
   PF09304.5  41 eLksllasleaqkaerekrlrelqakidellknlekeklakleLesrlskaek 93 
                 +L ++ + l++         + + a+++  +  ++  + a +eLe+rls+ + 
  MMETSP1325-20131115|4167_1 160 RLAKSHQQLRSAGS-AAGGTAAMAAEMESNRTRIQALRSAVMELEARLSQQQD 211
                 56666666665543.3445677999***********************99875 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.14   1.8e+02       3      40 ..      24      61 ..      10      91 .. 0.74
   2 ?   -0.4   0.1      0.63   7.9e+02       9      27 ..     122     140 ..     103     172 .. 0.57
   3 ?    6.9   0.1    0.0034       4.2      11      52 ..     181     219 ..     177     230 .. 0.75

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.14
   PF08286.6  3 eldnekvrlakelndleselenlqseleelkeeleele 40
                ++ +  v   k + d+es +++ +sel e  +  +e e
  MMETSP1325-20131115|4167_1 24 SMQQTIVGQRKRIGDQESVVSRFKSELHECVQFIQEPE 61
                55666677778888888888888888888777666655 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.63
   PF08286.6   9 vrlakelndleselenlqs 27 
                 +r++ +  +l +e+++ ++
  MMETSP1325-20131115|4167_1 122 MRVMHDNMSLIREINKQRE 140
                 4444444444444443322 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0034
   PF08286.6  11 lakelndleselenlqseleelkeeleeleeqenegkeedee 52 
                 +a e+++  ++++ l+s ++el+++l + +++++     ++e
  MMETSP1325-20131115|4167_1 181 MAAEMESNRTRIQALRSAVMELEARLSQQQDEQRP---TSRE 219
                 56777888899999999999999999999998887...4444 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.4   0.00021      0.27      66     134 ..       6      73 ..       1      78 [. 0.88
   2 ?    0.6   0.2      0.37   4.6e+02      56      94 ..     102     140 ..      87     173 .. 0.62
   3 ?    1.8   1.6      0.16     2e+02      51      76 ..     182     207 ..     132     220 .. 0.53

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00021
   PF10473.4  66 eelkdLeldLvsvrsekenLakelqekqervseLeklnsslknlLeekeqekvqikeesktavemLqtq 134
                 ++  +L l + ++r++ +++++ +  +++r+ + e++ s +k+ L+e  q  +q+ e +++ v  L++q
  MMETSP1325-20131115|4167_1   6 RSNAQLDLMIGELRKKLDSMQQTIVGQRKRIGDQESVVSRFKSELHECVQ-FIQEPERLRSCVAHLHKQ 73 
                 5566777778899**********************************998.59999**99999999887 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.37
   PF10473.4  56 tLktkieemaeelkdLeldLvsvrsekenLakelqekqe 94 
                 t+ t +e+ a ++++   + + v  ++ +L++e+++++e
  MMETSP1325-20131115|4167_1 102 TFTTLKEKFAMDVEAHSAENMRVMHDNMSLIREINKQRE 140
                 445555555555555555555666666666666666555 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.16
   PF10473.4  51 kaevetLktkieemaeelkdLeldLv 76 
                  ae+e+ +t+i+++ + + +Le  L 
  MMETSP1325-20131115|4167_1 182 AAEMESNRTRIQALRSAVMELEARLS 207
                 22333333333333333333333332 PP

>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.091   1.1e+02      12      61 ..      18      70 ..       7      81 .. 0.76
   2 ?    7.0   5.3    0.0039       4.9      42     118 ..     137     211 ..     116     216 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.091
   PF03245.8 12 knqeleaanaeiedlqarqravaeldakhteeLadak...sendrLradvaaG 61
                 +++l   +++i  +++r+ +   +  ++  eL++     +e +rLr  va  
  MMETSP1325-20131115|4167_1 18 LRKKLDSMQQTIVGQRKRIGDQESVVSRFKSELHECVqfiQEPERLRSCVAHL 70
                56777788888999999999999999999999998652225778888888865 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0039
   PF03245.8  42 eeLadaksendrLradvaaGrrRLrvkatCpavpeaasaaglgdaasarLsdaaerdyltLreeideaqeqlrglQd 118
                 ++ +  + ++  L++++a+  +RLr++ + ++ ++a+saag   a +a+++ + + ++++Lr+ ++e ++ l+  Qd
  MMETSP1325-20131115|4167_1 137 KQREANRGTKGVLQTKIASL-QRLRLAKSHQQLRSAGSAAGGTAAMAAEME-SNRTRIQALRSAVMELEARLSQQQD 211
                 56666777888999999987.9****9999999999999999888888886.56889****************9998 PP

>> PF07439.6  Protein of unknown function (DUF1515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.2       0.2   2.5e+02       2      37 ..      14      47 ..      13     127 .. 0.75
   2 ?    7.2   1.9     0.003       3.7      20      64 ..     138     207 ..     121     212 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.2
   PF07439.6  2 idagvlqqlgtllaevkelredlkrsedrsdasrak 37
                +++ + ++l+++++ +   r+ +    + s +sr k
  MMETSP1325-20131115|4167_1 14 MIGELRKKLDSMQQTIVGQRKRIGD--QESVVSRFK 47
                6777777777777777777776643..333344332 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.003
   PF07439.6  20 lredlk.........................rsedrsdasrakmyrkmdelvervtalegsvvklkadit 64 
                  re+ +                         rs   ++ + a m   m+    r++al ++v++l+a ++
  MMETSP1325-20131115|4167_1 138 QREANRgtkgvlqtkiaslqrlrlakshqqlRSAGSAAGGTAAMAAEMESNRTRIQALRSAVMELEARLS 207
                 5555555555555555555555566667788899999999*************************99876 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   2.2      0.04        50      23     101 ..       4      78 ..       1     113 [. 0.53
   2 ?    1.2   1.3      0.24     3e+02      51     101 ..     107     157 ..      89     160 .. 0.65
   3 ?    3.9   2.6     0.035        44      60     108 ..     162     210 ..     120     211 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.04
   PF13863.1  23 ierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekle 101
                 ++r +++l+    el+kk   +q++++   k + d e      + + ++e +e+++  +e ++l++ +++l++++ + e
  MMETSP1325-20131115|4167_1   4 FHRSNAQLDLMIGELRKKLDSMQQTIVGQRKRIGDQE----SVVSRFKSELHECVQFIQEPERLRSCVAHLHKQHVHRE 78 
                 4444444444444455555555555554444444433....33455666666666666666666666666666665544 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.24
   PF13863.1  51 fnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekle 101
                  +kf  d ea   + ++ +++  ++ +e++++ +  + +   l+++i+ l+
  MMETSP1325-20131115|4167_1 107 KEKFAMDVEAHSAENMRVMHDNMSLIREINKQREANRGTKGVLQTKIASLQ 157
                 467777777777777777777777777777777777777777777776665 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.035
   PF13863.1  60 akreraekkaeeekkekkekeeeikklkaqleelkaeiekleekleeyq 108
                 ak ++++++a +++  +  + +e+++ ++ +++l++   +le++l + q
  MMETSP1325-20131115|4167_1 162 AKSHQQLRSAGSAAGGTAAMAAEMESNRTRIQALRSAVMELEARLSQQQ 210
                 78899999999999999***************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1006  (0.073581); expected 273.4 (0.02)
Passed bias filter:                      441  (0.0322557); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.79
# Mc/sec: 703.74
//
Query:       MMETSP1325-20131115|4170_1  [L=375]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-08   32.5   0.0    1.2e-07   31.1   0.0    1.7  1  PF00291.20 Pyridoxal-phosphate dependent enzyme


Domain annotation for each model (and alignments):
>> PF00291.20  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0     9e-12   1.2e-07     138     305 ..      54     254 ..      19     256 .. 0.76

  Alignments for each domain:
  == domain 1    score: 31.1 bits;  conditional E-value: 9e-12
                 --TT-CHHHHHHHHT-HHCCCHHHH----..-B---.---.--HHHHHHCCCCCTHTT---EEEEEGGG-TT-...............S..----T....................................................TT-GGGHHHHSS---EEE.EE-HHHHHHHHHHHHHH-----------HHHHHHHHHH-..HHTG----EEEEE CS
  PF00291.20 138 ldqsndpdviaGygtiglEileqlgkpdpdavvvpv.GgG.gliaGiakglkelilpkirvigvepegsdalarslragervqldkkttiaglscgt...................................................pldgelafelidelvdevvtvsdeealeavrllarregivvepsgaaalaallraekegslaagkgkrvvvvl 305
                 ++ +     + +y  +++++  q ++++ + + vp+ ++G  l++++ak ++     ++   +v ++++d l+r+++ ge+    k++++a++s+++                                                      +++ ++++++    +   ++ee+l+ ++   +++g++ +p++a++++a+ +    ++    ++++ v++ 
  MMETSP1325-20131115|4170_1  54 VLAQ-----MTYYFYAYYQVTGQTQNVKKVSFSVPTgNFGdILAGYYAKRMGL----PVDKLVVGTNENDILHRFFSSGEYL---KENIAASISPSMdicvssnferylfhlfgddpkvlrqlmeafeskdatgapiknavgtgksrsLKVTAEKLKAARKDFLSE-RSNTEETLALIKKYDAEHGYLYCPHSAIGVVAVEK----LGM---NNESMVCLA 254
                 3333.....55566666666656655555579****999*6666666777777....9***********************4...547788***********************************9999999999999999988766444444455555544455.89999****************************76....444...456677765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.53
# Mc/sec: 1695.54
//
Query:       MMETSP1325-20131115|4169_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 264.43
//
Query:       MMETSP1325-20131115|4172_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.1   0.7        2.7    7.5   0.0    2.1  2  PF02461.11 Ammonia monooxygenase
      0.038   13.2   0.7        7.7    5.8   0.0    2.5  2  PF03779.9  SPW repeat
       0.43   10.0   5.1          2    7.9   0.2    2.4  2  PF01006.15 Hepatitis C virus non-structural protein NS4a
         10    6.3   9.1         24    5.1   1.1    3.0  2  PF10518.4  TAT (twin-arginine translocation) pathway signal sequence


Domain annotation for each model (and alignments):
>> PF02461.11  Ammonia monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0008       2.7     122     159 ..       9      47 ..       6      60 .. 0.84
   2 ?    5.2   0.0    0.0039        13     123     154 ..     109     140 ..      91     151 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0008
                 ------HHHHHHHH----HHHHHH------.--TT---- CS
  PF02461.11 122 alvpaallldivlllsksylltavvgglaf.glllypan 159
                 +lvp + + ++++ + ++++++a+vgg a  +l lyp++
  MMETSP1325-20131115|4172_1   9 MLVPLSYVDNTLFSFVRDFVVSALVGGGALaALALYPQD 47 
                 578888888899999**********99887257799975 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0039
                 -----HHHHHHHH----HHHHHH--------T CS
  PF02461.11 123 lvpaallldivlllsksylltavvgglafgll 154
                 lvp a l  +++ + ++++l+a+vgg a + l
  MMETSP1325-20131115|4172_1 109 LVPFAYLDGTLFAVVRDFVLSALVGGGALAAL 140
                 6788877778999************9987654 PP

>> PF03779.9  SPW repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0023       7.7      21      44 ..      21      44 ..      21      48 .. 0.93
   2 ?    4.9   0.2    0.0043        15      21      43 ..     120     142 ..     118     145 .. 0.93

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0023
   PF03779.9 21 fsataglawnnviaGivvalLalg 44
                fs +++ ++++++ G ++a+Lal+
  MMETSP1325-20131115|4172_1 21 FSFVRDFVVSALVGGGALAALALY 44
                788999****************97 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0043
   PF03779.9  21 fsataglawnnviaGivvalLal 43 
                 f+++++ ++++++ G ++a+Lal
  MMETSP1325-20131115|4172_1 120 FAVVRDFVLSALVGGGALAALAL 142
                 789999****************8 PP

>> PF01006.15  Hepatitis C virus non-structural protein NS4a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.2   0.00058         2       4      16 ..      32      44 ..      30      57 .. 0.79
   2 ?    3.8   0.4     0.011        38       4      15 ..     131     142 ..     129     145 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00058
  PF01006.15  4 vlvGlalAglAiy 16
                ++ G+alA+lA+y
  MMETSP1325-20131115|4172_1 32 LVGGGALAALALY 44
                6679********9 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.011
  PF01006.15   4 vlvGlalAglAi 15 
                 ++ G+alA+lA+
  MMETSP1325-20131115|4172_1 131 LVGGGALAALAL 142
                 66799*****97 PP

>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.7     0.012        40       7      18 ..      31      42 ..      25      44 .. 0.57
   2 ?    5.1   1.1    0.0069        24       8      21 ..     128     141 ..     124     144 .. 0.52

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.012
   PF10518.4  7 fLkggaaaaAaa 18
                +L gg+a+aA+a
  MMETSP1325-20131115|4172_1 31 ALVGGGALAALA 42
                344555555554 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0069
   PF10518.4   8 LkggaaaaAaaalg 21 
                 L ++ +++A+aal+
  MMETSP1325-20131115|4172_1 128 LSALVGGGALAALA 141
                 44444455555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 736.99
//
Query:       MMETSP1325-20131115|4171_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.085   12.1   0.1       0.23   10.7   0.1    1.7  1  PF05899.7  Protein of unknown function (DUF861)
       0.48    8.7   2.9       0.67    8.2   2.0    1.2  1  PF03344.10 Daxx Family
        8.4    5.7   8.6         14    5.0   5.9    1.3  1  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF05899.7  Protein of unknown function (DUF861)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1     5e-05      0.23      12      45 ..     233     266 ..     228     269 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5e-05
                 EEE-SEEEEEE-SSEEEEEEEE-EEEEEE----E CS
   PF05899.7  12 wectpGkfrleyeedEtcyileGevtvtpegget 45 
                 ++++ G  + ++ ++ tc +++G+vt ++++g++
  MMETSP1325-20131115|4171_1 233 LGQGQGHSKGSFVQTNTCRVVSGSVTTAEDEGNQ 266
                 5678899999999****************99976 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   2.0   0.00015      0.67     425     478 ..      36      95 ..      22     118 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00015
  PF03344.10 425 ssestesPllasqeseeeekaekeedeeddekeeed......kseeeeeeeeeeeeeeea 478
                 ++ stes +l+  +s + +   ++++ ed+    e       +++e ee+e+ee+ee+e 
  MMETSP1325-20131115|4171_1  36 HTGSTESGGLHDSNSLHASLLTSDDEAEDEAGGAERavglswEEDETEEDEDEEDEEDEG 95 
                 555666666666666677777777777777777666788877777777777777777764 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   5.9    0.0031        14     113     132 ..      61      93 ..      39      98 .. 0.54

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0031
                 ..................----XXXXXXXXXXX CS
  PF03066.10 113 eslde.............eddeedeeeeddeed 132
                 e +de             ed+ e++e+e+deed
  MMETSP1325-20131115|4171_1  61 EAEDEaggaeravglsweEDETEEDEDEEDEED 93 
                 333447777777776432222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.31s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 1376.63
//
Query:       MMETSP1325-20131115|4173_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.017   15.0   0.5      0.028   14.3   0.2    1.6  1  PF07216.7  LcrG protein
        0.1   12.3   1.5        0.2   11.4   1.0    1.5  1  PF00397.21 WW domain
       0.24   10.2   2.7       0.31    9.8   1.9    1.1  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
        8.2    6.9   8.8         92    3.5   6.1    2.4  1  PF11273.3  Protein of unknown function (DUF3073)


Domain annotation for each model (and alignments):
>> PF07216.7  LcrG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   8.1e-06     0.028      31      83 ..     103     160 .]      76     160 .] 0.76

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 8.1e-06
   PF07216.7  31 llaglglaaeagellfea..asaelvkaaeqeLlaeikrrresqpqqgeq...Gkrpr 83 
                  ++   +  ++ge++f    ++ +++ +ae++++a  kr  +++  qg++   Gk++r
  MMETSP1325-20131115|4173_1 103 RCKTYWVHVDTGEVVFTKpaKEVDEMTQAERDVIAAKKRIAQRKAVQGKKtvgGKKRR 160
                 56666677899*****974478889**********99997777666654322166654 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.0   5.9e-05       0.2       5      31 .]      95     121 ..      91     121 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.9e-05
                 EEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   5 WeersddddGrvYYyNheTgetqWekP 31 
                 Wee++d++  ++Y+++  Tge   +kP
  MMETSP1325-20131115|4173_1  95 WEEKYDEERCKTYWVHVDTGEVVFTKP 121
                 998886335788***********9999 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.9   9.1e-05      0.31      22      95 ..      50     125 ..      44     139 .. 0.70

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 9.1e-05
  PF03896.11  22 vgavkklaasaqdltedeeaeddvvdedeede.aeveedekteaeeeedeeeagevkaspdadt.tilFvkgeedl 95 
                 v+ +k+  + a++ +e+  +e+ ++++de+ + a  e++e  +++ ee  +e++  +   ++dt  ++F+k+ +++
  MMETSP1325-20131115|4173_1  50 VEYIKNAGVKAKENVEEISVEAMQAKKDEAKNnAYLEDEEVGSSKWEEKYDEERCKTYWVHVDTgEVVFTKPAKEV 125
                 55667778889899999888888887777655055555555557666666666677777888885699****6654 PP

>> PF11273.3  Protein of unknown function (DUF3073)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   6.1     0.027        92       3      61 ..      33      98 ..      32     103 .. 0.59

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.027
   PF11273.3  3 GRaKAKqtKvAReLKYsspdtDyda..LqrELsg.......gsskssadeddkyeddedddldeyade 61
                GR K K+ K AR++KY + +   +a   ++E  +       +++k++a++++  ed+e + + +++++
  MMETSP1325-20131115|4173_1 33 GRSK-KHDKWARRIKYGTVEYIKNAgvKAKENVEeisveamQAKKDEAKNNAYLEDEEVG-SSKWEEK 98
                8888.***********99874322211233332235556655666666666666676666.5566544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1121  (0.0819924); expected 273.4 (0.02)
Passed bias filter:                      500  (0.0365711); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 798.79
//
Query:       MMETSP1325-20131115|4175_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   11.6   0.8      0.079   11.3   0.5    1.0  1  PF08393.8 Dynein heavy chain, N-terminal region 2
      0.075   11.5   1.9      0.095   11.2   1.3    1.1  1  PF08317.6 Spc7 kinetochore protein
       0.25   10.3   4.8       0.29   10.1   3.3    1.1  1  PF02841.9 Guanylate-binding protein, C-terminal domain


Domain annotation for each model (and alignments):
>> PF08393.8  Dynein heavy chain, N-terminal region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.5   1.7e-05     0.079     135     197 ..      11      77 ..       5      86 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.7e-05
   PF08393.8 135 veqAqkElsiekaLkkieeewkelefelveykd...kgtyllkevdeiieqlddn.lvklqsmkasp 197
                 +++Aq+E++ie++++++ +  k++e+ + ++++   +  + ++++  +++++d++ l+ l++ +++p
  MMETSP1325-20131115|4175_1  11 AASAQREEEIEATMDQLSSYEKKVELMMGRVEKektNVEKEVENLRSLQQTIDKDpLLRLSNFSNQP 77 
                 689**************************99995432345567788899999854266777777766 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.3   2.1e-05     0.095     159     214 ..      18      73 ..      11      81 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 2.1e-05
   PF08317.6 159 eelkedeellnkklelinsilpklrekkealkeelasLrqlkdeleecdseelekl 214
                 ee+++  ++l+ ++++++ ++ ++++ k+++++e+++Lr+l++ + +    +l+++
  MMETSP1325-20131115|4175_1  18 EEIEATMDQLSSYEKKVELMMGRVEKEKTNVEKEVENLRSLQQTIDKDPLLRLSNF 73 
                 5677778999*******************************998887777777665 PP

>> PF02841.9  Guanylate-binding protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.3   6.5e-05      0.29     217     275 ..       6      64 ..       3      81 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 6.5e-05
   PF02841.9 217 eaekelleekqkeeeqrmeakeksleehvkqLkekleeereklleeqerllekklkeqe 275
                 e+e ++  ++++ee++   ++  s+e++v+ +  + e+e+ ++++e e+l + ++   +
  MMETSP1325-20131115|4175_1   6 EEESAAASAQREEEIEATMDQLSSYEKKVELMMGRVEKEKTNVEKEVENLRSLQQTIDK 64 
                 5667777778888888889999************************9998776665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       951  (0.0695582); expected 273.4 (0.02)
Passed bias filter:                      716  (0.0523698); expected 273.4 (0.02)
Passed Vit filter:                       117  (0.00855764); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.42s 00:00:00.96 Elapsed: 00:00:00.50
# Mc/sec: 809.97
//
Query:       MMETSP1325-20131115|4177_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|4176_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.9   1.0       0.17   11.5   0.7    1.2  1  PF04247.7 Invasion gene expression up-regulator, SirB


Domain annotation for each model (and alignments):
>> PF04247.7  Invasion gene expression up-regulator, SirB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.7   1.2e-05      0.17      49     112 ..       3      72 ..       1      78 [. 0.73

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.2e-05
   PF04247.7  49 lLLlsgiaLvvil...qqypfeepWLteKllllvlYivlgvial.krkrskklr..ilafllAlvvflyi 112
                 ++++sg+a+++++   + +p  +pWLt   ++    ivl ++a+  r++ + +   i+ +++ +++fl+i
  MMETSP1325-20131115|4176_1   3 VVFASGVAVITCIvhrECSPYIDPWLTGLSVGAHWQIVLVCMAMmMRGNAEDMHigIILLVTNVLLFLAI 72 
                 6889999998877677899*************99999999998854555555540055555666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       498  (0.0364248); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 916.25
//
Query:       MMETSP1325-20131115|4179_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-21   74.5   1.1      5e-21   74.3   0.1    1.5  2  PF08541.5  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
     0.0047   16.2   0.0     0.0056   15.9   0.0    1.2  1  PF02803.13 Thiolase, C-terminal domain
  ------ inclusion threshold ------
        0.1   12.3   0.0       0.26   11.0   0.0    1.8  2  PF02801.17 Beta-ketoacyl synthase, C-terminal domain
       0.11   12.5   0.0       0.13   12.2   0.0    1.1  1  PF01730.11 UreF


Domain annotation for each model (and alignments):
>> PF08541.5  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.2   4.1e+03      66      81 ..      15      30 ..      11      34 .. 0.67
   2 !   74.3   0.1   1.5e-24     5e-21       1      62 [.      53     114 ..      53     116 .] 0.97

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.2
                ------EEEE------ CS
   PF08541.5 66 lkpgdlvllvgfGaGl 81
                l++g++ +++g+ aG+
  MMETSP1325-20131115|4179_1 15 LADGKHTVTTGAYAGI 30
                5678888888865554 PP

  == domain 2    score: 74.3 bits;  conditional E-value: 1.5e-24
                 HHC--------SEEEE--S-HHHHHHHHHH----TTEE--GGGT----TTHHHHHHHHHHHC CS
   PF08541.5   1 LekagltpedidwfvphqanlriidavakrlglpeekvvvnldeyGntsaasiplaLdeave 62 
                 L+ aglt++d+d++++hqan+ri++ va+rlg++ ++v++nlde+Gntsa sip+aL+ av+
  MMETSP1325-20131115|4179_1  53 LANAGLTVDDVDHLLLHQANIRIMETVAQRLGIDFSQVITNLDEHGNTSAGSIPIALAGAVA 114
                 789******************************************************99987 PP

>> PF02803.13  Thiolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.7e-06    0.0056      27      69 ..      48      90 ..      21     113 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.7e-06
                HHHHHHHH----CCC-S-BEE--SBHHHHHHHHHHTT-GGCCB CS
  PF02803.13 27 aikkalkkaGltvedidlfEinEAFaaqalavakeldldlekv 69
                + ++al +aGltv+d+d + ++ A    + +va++l++d ++v
  MMETSP1325-20131115|4179_1 48 VLEEALANAGLTVDDVDHLLLHQANIRIMETVAQRLGIDFSQV 90
                56899**********************************9554 PP

>> PF02801.17  Beta-ketoacyl synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   7.6e-05      0.26      26      51 ..      44      69 ..      22      79 .. 0.81
   2 ?   -1.2   0.0      0.44   1.5e+03      26      45 ..      71      90 ..      67     103 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 7.6e-05
                --HHHHHHHHHH--S-GGGECEEE-- CS
  PF02801.17 26 aqarairkalaeagldpedvdyveah 51
                +  r++++ala+agl+ +dvd +  h
  MMETSP1325-20131115|4179_1 44 EVPRVLEEALANAGLTVDDVDHLLLH 69
                55689****************98877 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.44
                --HHHHHHHHHH--S-GGGE CS
  PF02801.17 26 aqarairkalaeagldpedv 45
                a  r+++++ +++g+d ++v
  MMETSP1325-20131115|4179_1 71 ANIRIMETVAQRLGIDFSQV 90
                55688999999999997775 PP

>> PF01730.11  UreF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.8e-05      0.13      35     100 ..      52     114 ..      41     116 .] 0.86

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.8e-05
                 HHTT-HHHH---HHHHHHH--SHHHHHHHHH---HHHHHHHH-HHHHHHHH-SS--HHHH---HHH CS
  PF01730.11  35 lrrgdaaalrelddwllatretselrleteqmGrsllellaeelqerlkqasaevtypvafalaaa 100
                 + ++   +++++d++ll+++  + +    +++G  + +++ +    + + ++ +++ p+a+a a+a
  MMETSP1325-20131115|4179_1  52 ALANAGLTVDDVDHLLLHQANIRIMETVAQRLGIDFSQVITN---LDEHGNTSAGSIPIALAGAVA 114
                 44555679**********************************...567788899*******98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|4178_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.61
# Mc/sec: 1084.25
//
Query:       MMETSP1325-20131115|4181_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-26   91.1   0.8    6.8e-26   90.9   0.6    1.1  1  PF03381.10 LEM3 (ligand-effect modulator 3) family / CDC50 family


Domain annotation for each model (and alignments):
>> PF03381.10  LEM3 (ligand-effect modulator 3) family / CDC50 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   0.6     5e-30   6.8e-26      59     160 ..       2     103 ..       1     129 [. 0.82

  Alignments for each domain:
  == domain 1    score: 90.9 bits;  conditional E-value: 5e-30
  PF03381.10  59 nfYqnhrryvkSrsdkQLrgkavsksd..skeCkplktngseegkiivPCGliAnslFNDtfsllrksgkksevslskkgIawksdkekkfkk.tkykesevvkp 160
                 nfYqnhr+y+kS+ ++QL g+  ++++   + C+plktn    + +++PCGliAn+lFND ++l  +s ++ + +l+++gIaw sdk++kf++ ++y ++++++ 
  MMETSP1325-20131115|4181_1   2 NFYQNHRQYAKSYLSDQLTGTVFESDSvsLDLCAPLKTN---GSLVLNPCGLIANTLFNDKITLATTSDTDGHPKLKTTGIAWPSDKKNKFGQpDSYCKKNQASS 103
                 9*********************5555558899******5...677*******************9999999999*******************655644433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.83
# Mc/sec: 508.14
//
Query:       MMETSP1325-20131115|4180_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-09   36.4   0.0    5.2e-09   35.7   0.0    1.3  1  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   3.8e-13   5.2e-09       6      77 ..      13      84 ..      10      94 .. 0.86

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 3.8e-13
                EEESS--S-STSSSS-EEEEEEEECTTE.EEEEE--BSS-SSEEEEEEEEEEESCGGGTEEEEEEEECHSSSC CS
  PF00168.25  6 ieAknLpnkdkngtsdpyvkvslggaks.kkkrTrvikntlnPvWnekftfevvaeelaeleleVkdedrfgk 77
                +++++L ++d +++sdp+v++  ++ +  +  rT++i+++ +Pv++  +++++ +++++++++eV d+d ++ 
  MMETSP1325-20131115|4180_1 13 LRCDKLRKCDRFSKSDPFVVIIDKD-TEhEYGRTEIIQDNHEPVFDTPIKMPFLPDQVQRIRIEVRDDDGKNG 84
                6899***************985555.555789*************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1545.41
//
Query:       MMETSP1325-20131115|4182_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00034   20.3   0.2    0.00047   19.8   0.1    1.2  1  PF13977.1 Bacterial transcriptional repressor


Domain annotation for each model (and alignments):
>> PF13977.1  Bacterial transcriptional repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   3.5e-08   0.00047      25      95 ..      11      81 ..       8      83 .. 0.83

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 3.5e-08
   PF13977.1 25 veallpldqerrrevavWlafwaearhdpelarllrenyrrlrsnlaellr.lgeeggllpaadareaAerl 95
                +++ll l++ +  +++  ++++++++ d++  rl+ e +r++r+ l+ ++r   +++g  pa  +r++A+ l
  MMETSP1325-20131115|4182_1 11 IQELLNLTDPESTTSQPVIDIYSAVAEDENTMRLCIEGHRAMRASLTNAIRfYHARQGDVPA-ASRQLARHL 81
                788899999999999999*********************************75555555554.455777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 576.15
//
Query:       MMETSP1325-20131115|4183_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 420.41
//
Query:       MMETSP1325-20131115|4184_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00015   21.7   0.0    0.00028   20.9   0.0    1.5  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0     2e-08   0.00028       2     101 ..      84     172 ..      83     175 .. 0.85

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 2e-08
                 SBEEEEEEEETSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHH CS
  PF00169.24   2 ikeGyllkksellktwkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalkn 101
                 ++eG l+kk  +  +   + f+L+s++L+y+       +++  +   l+ +++++ +++           f+i ++ + s+ + aes++ ++ Wv+ l +
  MMETSP1325-20131115|4184_1  84 VMEGDLVKKC-QSGKSVTYRFFLFSDQLVYTHRAF-SGEFKVHRQLLLSVLRCEDIEDN--------ATAFRILHPLK-SFAVTAESPQAKTHWVRVLTQ 172
                 799*******.9999999**************997.45566666666666677777775........8**********.****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|4185_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-15   55.8   0.5    4.4e-15   55.2   0.4    1.3  1  PF01565.18 FAD binding domain
    1.9e-10   40.4   0.2    3.8e-10   39.4   0.1    1.5  2  PF02913.14 FAD linked oxidases, C-terminal domain


Domain annotation for each model (and alignments):
>> PF01565.18  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.4   6.5e-19   4.4e-15      76     139 .]       4      65 ..       1      65 [. 0.96

  Alignments for each domain:
  == domain 1    score: 55.2 bits;  conditional E-value: 6.5e-19
                 HHHHHHHHH--B-S-GGCTCCGSB---TTTTT-----TTCG--HHGCEEEEEEEET---EEEEE CS
  PF01565.18  76 dleealaakglllglepgslipgtvGGaiatngggygsekyGlirdnvlslevvladGevvrls 139
                 +l+++l+  gl+++++pg+  ++t+GG++at ++g+++ +yG++rdnv +l+vv+adG+v++++
  MMETSP1325-20131115|4185_1   4 QLNNELRHTGLTFPVDPGA--DATIGGMTATAASGTSAVRYGTMRDNVIGLTVVTADGSVLETG 65 
                 89****************9..699*************************************986 PP

>> PF02913.14  FAD linked oxidases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.23   1.5e+03      94     136 ..      53      96 ..      26      99 .. 0.60
   2 !   39.4   0.1   5.5e-14   3.8e-10       2      94 ..     102     189 ..     101     193 .] 0.94

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.23
                 E.EEECCCS-TCTCHHHHHHHTH..HCCHCHHCTTEEEEEEEEE- CS
  PF02913.14  94 dvvvaqdeaeqerlwkarkkalp..ylrdallgagalvftedvsv 136
                 + vv+ d +  e   +ark+     +   +++++g+l ++++vs+
  MMETSP1325-20131115|4185_1  53 T-VVTADGSVLETGTRARKSSAGfdLTSLFVGSEGTLGIITEVSL 96 
                 2.5566666655556666666555566666777777777777776 PP

  == domain 2    score: 39.4 bits;  conditional E-value: 5.5e-14
                 TTSS-SEEEEEEHHHHHHHHHGGGTHCTSS-S-HHHHHHHHHHHCHHTEEETTS.TTT.EEEEE--HHHHHHHHHHHHHHHHHHHHTCB---E CS
  PF02913.14   2 peavavavlgfpsfeaavkavrelassgigpaalelmdkaaldlvlatkglkglpdeeealllvefegddeevaeerveaavealleatgagd 94 
                 pe+v  a + fps++aa ++v ++++ gi++a++elmd++a+ +v+++ +      +e+ +l++ef+g    + ee++e av +l+ + ga++
  MMETSP1325-20131115|4185_1 102 PEEVLGAICPFPSLKAATDTVCAAVQLGIPVARAELMDDVAISAVNGHFKT---SYKEAPTLFFEFHGGA-SAIEEQAE-AVRDLAYEMGAEE 189
                 8889999********************************************...****************.89999999.9999999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 984.04
//
Query:       MMETSP1325-20131115|4174_1  [L=2751]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-42  144.3   0.0    6.8e-42  143.2   0.0    1.5  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
    8.8e-18   64.6   0.0    8.1e-14   51.6   0.0    2.4  2  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
    4.2e-07   28.8   1.5    8.8e-07   27.8   1.0    1.6  1  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
       0.15   11.5   1.3       0.39   10.2   0.9    1.6  1  PF07699.8  GCC2 and GCC3
       0.89    9.5   5.4          2    8.4   1.2    2.9  3  PF12898.2  Stc1 domain


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.2   0.0   2.5e-45   6.8e-42       5     272 .]    1619    2018 ..    1617    2018 .. 0.89

  Alignments for each domain:
  == domain 1    score: 143.2 bits;  conditional E-value: 2.5e-45
                  -------THHHHHHHHHHHTSHHHHHHHHTTHCCH..................................................................H-TTHHTTTHHHHHHHHHHHHH--HHH-SSS---HHHHHHHHHHBGGGGGC.TTS-HHHHHHHHHHHHHHHHHHHCCHHHHSTTS-....-SCHHHHC-EEEEEEEEETTCEEE.........................................................EEEECCB-SEEEEEEE-EEEETTTTEEEE-----B--SEEE-GGGBSCHHH--BTTSSCEEEEEEEEEE--.-TT---EEEEEE.......SS-TT-EEEEETTEEEEE-HHHHTTC..........................EEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxx..........................xxxxxxx RF
  PF00443.24    5 GleNlGntCYmnsvlQcLvsipelrdyllryeerva..............................................................eineeneleeeaqlaraladlfkklvenssekkavsPsefkktlkkineqfsgy.kQqDahEfllflLdqlhedlnrlnkkektekqkaedsndslitdlfkgqlksrlkclecknv.........................................................kvklkrlPeiLiihlkRfkyseerssnkKlnekvefpleLdlssyvneekkeeseskpkkYeLvavvvHsG.slssGHYvayvk.......nneknkWlkfdDetvtevkeeevlke..........................saYvlfY 272 
                  Gl N +n CYmns++Q ++s++++r+ +l+ + r+                                                               + ++e+e   ++ ++r++++ ++ l     e + +  + ++kt++++ + +    +Q+D +Ef+  lL+ql+ +l+ +++             + li++ f+ ++++    ++ k+                                                          k+ + +lP++L+i+l+Rf+y++ r +++K n ++e+p+ Ld+ +y +       + +   Y+L ++++H+G ++ssGHY++++k       + + + WlkfdD++v+e+k +e+ +e                          +aY+ fY
  MMETSP1325-20131115|4174_1 1619 GLHNNANRCYMNSLMQQFASLKSFREQILQVPVRELekseeeegkeeekgdenleggtwdcpvctfqndvenaectmcgtqkpanakitaagvdpdeaRKEREKEARAKKAILREFQRTLRFL--SGGEMTFYDAEPLLKTVGANLSLMYPAeQQNDTKEFMDKLLEQLEVELSGTKN-------------PGLISTTFGATTAEVKTREHDKKHisrntqssttftlslrvegcesvgaaleayfkgeirevddeedtdengkpvkykfeyKTLFAELPPVLCIQLNRFSYDYGRGVPIKHNHRIEIPEVLDMHRYSE-------SGRGGVYKLKGMLIHMGaTASSGHYYSIIKsrapegaDADGGAWLKFDDNRVSELKPDEIDEEcfggeyqgtqkdaygnlryvtrekgwNAYLVFY 2018
                  99******************************888899*******************************************************999886667788888899999999999999..566667779999******9999998555**********************775.............66777777666666444444444467777777777777777777777999999999999999999999999********************************************************9.......569***************************9999999999999*************99988889999999999999999999999999*****999 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0    0.0001      0.27       2      32 ..    1619    1649 ..    1618    1661 .. 0.89
   2 !   51.6   0.0     3e-17   8.1e-14      55     295 .]    1743    1974 ..    1720    1974 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0001
   PF13423.1    2 GlennlnncYlnaLLqllfftldlfeailkh 32  
                  Gl nn n cY+n+L+q +   + ++e il+ 
  MMETSP1325-20131115|4174_1 1619 GLHNNANRCYMNSLMQQFASLKSFREQILQV 1649
                  9*************************99975 PP

  == domain 2    score: 51.6 bits;  conditional E-value: 3e-17
   PF13423.1   55 stkgtpcqasnllralstip.eaaalgeqqdvqeanrFileqlslelltlkvdifhererdkseaesslselfgtklisqnrciscqaek....vkeesllnlelpypp.sekgiklenileeslnseknkeikcesckkk.ssaevakkftslPpiLgIclkrynek.efg.akrlntkvdiplelrlphfiqddeqenekplsgefkyeLqavVchigdsltsghlvSlirvae.sek.....sqWylFnDfrv 295 
                  +++ t  +a+ ll++ + +   +    +q+d++e+   +leql+ el+ +k                 +s +fg ++ ++ +  + +++      + +++++l+l ++  ++ g  le +++  +++  ++e ++e++k    ++e++  f +lPp+L I+l+r +++   g + ++n +++ip+ l++ +  +              +y+L+++ +h+g + +sgh+ S+i+ +  +         W +F+D+rv
  MMETSP1325-20131115|4174_1 1743 GGEMTFYDAEPLLKTVGANLsLMYPAEQQNDTKEFMDKLLEQLEVELSGTKN-------------PGLISTTFGATTAEVKTR-EHDKKHisrnTQSSTTFTLSLRVEGcESVGAALEAYFKGEIREVDDEEDTDENGKPVkYKFEYKTLFAELPPVLCIQLNRFSYDyGRGvPIKHNHRIEIPEVLDMHRYSES---------GRGGVYKLKGMLIHMGATASSGHYYSIIKSRApE-GadadgGAWLKFDDNRV 1974
                  5566666777888888887745667778*********************995.............467999999888777776.333322111133446777777777644557777777777777544444444444433367999*********************96667****************988733.........35689*************************9741.33333355*******98 PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   1.0   3.2e-10   8.8e-07       3      29 ..    1675    1701 ..    1672    1702 .. 0.93

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 3.2e-10
  PF00641.13    3 gdWdCskClvqNfawstkCvaCqapkp 29  
                  g WdC++C++qN  ++ +C +C++ kp
  MMETSP1325-20131115|4174_1 1675 GTWDCPVCTFQNDVENAECTMCGTQKP 1701
                  59**********************998 PP

>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.9   0.00014      0.39      14      35 ..    1679    1700 ..    1677    1708 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00014
   PF07699.8   14 CprGtYkneegqkkCiaCppgt 35  
                  Cp  t++n +++ +C++C+ ++
  MMETSP1325-20131115|4174_1 1679 CPVCTFQNDVENAECTMCGTQK 1700
                  ******************9875 PP

>> PF12898.2  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.1     3e+03      35      46 ..     426     437 ..     411     444 .. 0.76
   2 ?    0.4   0.0      0.23   6.2e+02      55      79 ..    1605    1628 ..    1594    1631 .. 0.89
   3 ?    8.4   1.2   0.00074         2      30      63 ..    1669    1703 ..    1651    1705 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.1
   PF12898.2  35 qklikCreCtge 46 
                 + +++C++Ct++
  MMETSP1325-20131115|4174_1 426 TIALSCLRCTDK 437
                 56789*****98 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.23
   PF12898.2   55 kCkktkpleeFskkqrrqkdparCs 79  
                   C+   +l++F++  ++++++ rC+
  MMETSP1325-20131115|4174_1 1605 LCRAQEDLKSFARPGLHNNAN-RCY 1628
                  59999*************999.996 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.00074
   PF12898.2   30 kvaasqklikCreCt.geqereleCskCkktkple 63  
                    +    +  C  Ct +++++++eC++C++ kp++
  MMETSP1325-20131115|4174_1 1669 DENLEGGTWDCPVCTfQNDVENAECTMCGTQKPAN 1703
                  5566677889*****55599999*********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2751 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 3.39u 0.42s 00:00:03.81 Elapsed: 00:00:01.54
# Mc/sec: 4280.77
//
Query:       MMETSP1325-20131115|4188_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|4186_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-32  112.8  18.1    1.7e-32  112.1  12.6    1.4  1  PF01061.19 ABC-2 type transporter
  ------ inclusion threshold ------
      0.055   12.3  28.8       0.14   11.0  18.8    2.1  2  PF12698.2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.1  12.6   2.5e-36   1.7e-32       2     209 .]      38     250 ..      37     250 .. 0.94

  Alignments for each domain:
  == domain 1    score: 112.1 bits;  conditional E-value: 2.5e-36
  PF01061.19   2 qikallkreflqryrdpslgllwkliqpllmalvfgtvfgnlg...n.ssgglqrpgllffsvlflafslltsiapiferergvlerelvsplyslsaivlakvlve.lpvsllqaiifllivyflvgldls..fflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsmpkwlqwiyylnPltyavealrsnll 209
                 q+k+l  r +++++r+p+++ ++++i    +a+ +g vf++++   + ++g+++r+gl+ff+++++++++l+s+ pi+  e++++ +e+++++y   a++ a+++++ +p+ +l  ++f++i+y ++gl      ++f+ +l+l+ l++s++ +li+ +++   + ++ +sl++l+ ll+ G++ +++++p+ + w+++++P  y+++al++n+l
  MMETSP1325-20131115|4186_1  38 QFKLLAVRALRTALRNPMVL-AMQMIAAACVAVTLGIVFFDINqynDgTAGIQDRLGLFFFILIYFSLMSLSSL-PIWRDEQRIFIHERAAGAYGTLAYFSANIVADlIPYRILPPAVFTAICYPMIGLAGHgrWLVFMSTLILFNLVTSAVCMLIGLVTTLNAVLNAAGSLMVLFSLLFAGYLRNPSDLPQGWLWFSWISPSFYGYNALVENEL 250
                 99***************887.********************88886436666699************7777777.*******************************************************9854499*****************************************************866799***************9986 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   3.4     0.016   1.1e+02     210     255 ..      57     112 ..      55     113 .. 0.69
   2 ?   11.0  18.8     2e-05      0.14     156     314 ..      86     246 ..      69     310 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.016
   PF12698.2 210 lgdllvgliqlllilll.afgl.......egipfg.nlllll.llfllfglayial 255
                 l++ +++  +++++l++ +f++       +gi+   +l++++ ++f l++l+++++
  MMETSP1325-20131115|4186_1  57 LAMQMIAAACVAVTLGIvFFDInqyndgtAGIQDRlGLFFFIlIYFSLMSLSSLPI 112
                 55566777777777776577778888888777776755554458888888888875 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 2e-05
   PF12698.2 156 knyasflaglllfilifigaliialsiveEkesrikelqlvsgvspfaywlskilgdllvg.liqlllilll...afglegipfgnlllll.llfllfglayialgyllsslfksestaqlvisililllsgfflgl.fpleslpsflkwifsiiPffslgdgll 314
                  ++++ l  ++++++ f  +++ +l i ++ ++  ++   +   + +ay+ ++i++dl+ + +++ +++ ++   ++g   +  ++ +l++   ++lf l+++a+++l++++++  +  ++  s++ l +s++f+g+    ++lp+ + w+++i P+f+ +++l 
  MMETSP1325-20131115|4186_1  86 AGIQDRLGLFFFILIYFSLMSLSSLPIWRDEQRIFIHERAAGAYGTLAYFSANIVADLIPYrILPPAVFTAIcypMIG---LAGHGRWLVFmSTLILFNLVTSAVCMLIGLVTTLNAVLNAAGSLMVL-FSLLFAGYlRNPSDLPQGWLWFSWISPSFYGYNALV 246
                 4455555555555555555555566677777777777777777999*************9523444555555368888...88887777776999*******************99999998888888.7777777735689999**************999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.64
# Mc/sec: 1347.95
//
Query:       MMETSP1325-20131115|4189_1  [L=387]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-12   47.0   0.0    2.3e-12   46.5   0.0    1.1  1  PF01852.14 START domain


Domain annotation for each model (and alignments):
>> PF01852.14  START domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   0.0   1.7e-16   2.3e-12      64     192 ..     221     361 ..     185     373 .. 0.83

  Alignments for each domain:
  == domain 1    score: 46.5 bits;  conditional E-value: 1.7e-16
                 HHTTTGG......---TT-SEEEEEEE----EEEEEEEE----------EEEEEEEEEEE.....----EEE---B--------.----EE-B----EEEEEE----T...EEEEEEE--B------HHHHHHHHHHHHHHH CS
  PF01852.14  64 ellddke......qWdetlakaetlevissggalqlmvaelqalsplvpRdfvfvRyirq....lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksngh...skvtwvehvdlkgrlphwllrslvksglaeg 192
                 + ++  +       W++t+ +   ++ +s +++l+++ a +   + +++Rdf+++R   +    +g+ +w     Sv   ++p  +++  R+ + + g+++   ++g    ++v+w+ + dlkg+l + l++  + + + ++
  MMETSP1325-20131115|4189_1 221 HAWHNIAsvpvheNWNKTVLEYYSVAPLSANTDLTYTAACSECAGLVSSRDFYIARRVARrklpDGRVSWGSGGCSVPLASDPG-QPNRTRGWNDVGGFVVIAPADGSdgsCCVVWIINSDLKGWLSKHLIELAITTVIGKF 361
                 44444444445669******************************************9988899999999*************99.9*************998777777777****************999998888777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:00.55
# Mc/sec: 1686.16
//
Query:       MMETSP1325-20131115|4187_1  [L=504]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   56.7   4.7    1.9e-09   36.6   0.1    3.1  3  PF00864.14 ATP P2X receptor


Domain annotation for each model (and alignments):
>> PF00864.14  ATP P2X receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1   8.5e-07     0.012       1      45 [.      12      56 ..      12      66 .. 0.91
   2 !    6.5   0.0   0.00019       2.6     152     190 ..     151     191 ..     147     214 .. 0.76
   3 !   36.6   0.1   1.4e-13   1.9e-09     282     366 ..     308     391 ..     282     399 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 8.5e-07
  PF00864.14  1 feYeteksvvvkskkvgilnriiqlvilayvigwvlllekgyqek 45
                f Y t k+v +++ ++g+ ++++ + il yv+   l ++ gy e+
  MMETSP1325-20131115|4187_1 12 FAYPTIKYVKIQDARLGLFKYFLMFSILLYVVLIELAMNGGYLEQ 56
                89******************************9999999999765 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.00019
  PF00864.14 152 CP.vEedkk.pkkalleevenftvfiknsiefpkfnvskrn 190
                 CP v ++++ p++  ++++e+ft++i  s+   + +++k+ 
  MMETSP1325-20131115|4187_1 151 CPfVYNQTEaPETFYVADAESFTILIDHSVVATQLDITKTS 191
                 88644444459999****************99999999875 PP

  == domain 3    score: 36.6 bits;  conditional E-value: 1.4e-13
  PF00864.14 282 fakyykeengtekRtLlKaygirfdilvtGkagkFdiipllinigsglallgvatvlcdlillyllkkaeqYkekkfeeveeeke 366
                 + k + + + ++ Rt l ++gi ++ +  G+ + Fd  +lli+i+++l+l++vatv++d++ ly+l  +++Y+e k+e  e+ + 
  MMETSP1325-20131115|4187_1 308 YYKPFYD-EYRQRRTTLNMHGISVEAVQGGTIKGFDFNNLLIQITTSLTLFAVATVIVDFVALYILPDKDVYEEYKYELTEDFSD 391
                 3333333.578899***********999999999*******************************************98877554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.84u 0.37s 00:00:01.21 Elapsed: 00:00:00.60
# Mc/sec: 2012.94
//
Query:       MMETSP1325-20131115|4191_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|4190_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.7   0.0       0.24   11.1   0.0    1.3  1  PF14292.1 SusE outer membrane protein


Domain annotation for each model (and alignments):
>> PF14292.1  SusE outer membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   1.7e-05      0.24      74     117 ..      33      74 ..      25      79 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.7e-05
   PF14292.1  74 ndfskavslgttdnsetsvsitvkeLNdilaklglepgetvtle 117
                 +d s+a++l++ d+ ++ + i+++ LN+ +a++gl  g  ++le
  MMETSP1325-20131115|4190_1  33 GDISNATELDSNDT-GRDIGISHASLNQTIATAGL-GGADYELE 74 
                 6899*****98887.9*****************99.45555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 890.72
//
Query:       MMETSP1325-20131115|4194_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       575  (0.0420568); expected 273.4 (0.02)
Passed bias filter:                      502  (0.0367174); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|4193_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-28   97.4   0.0    5.2e-28   97.2   0.0    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.2   0.0   3.8e-32   5.2e-28      24     225 ..       1     230 [.       1     242 [. 0.84

  Alignments for each domain:
  == domain 1    score: 97.2 bits;  conditional E-value: 3.8e-32
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXX.XXXXXX...............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14  24 rkfvnevrrldeverklrkleseikkakielkdekekpdvpesk..............evedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrelssldeefkalraaeglklg..............fvaGvikreklealerllwralrgnlyikqaeieevledpk..ekvekevfiiffvgeellekvkkilesfgaelyevpetee 225
                 r++v  ++r+de+er+l++++sei+k +++ ++ ++   + +++               +e+le +le++e++l+e+++++e+L++e+  + el++v+ + +  ++e +   +  ++s   ++++l++  g+  +               ++Gvi++     +er+l ra+rgn + + +eie++  dp+  + v+k+ f++f++++++++k+kki+  f+a+ly+vp+ ++
  MMETSP1325-20131115|4193_1   1 RRYVSHIKRCDELERRLKFFQSEIEKFGLPCMEAGSVDAFLQPSqgevgepshksgmhLLETLEVTLEKYEQQLRELNAFSEQLSEEFYMKVELQEVMINSQGLMNE-V-GYMTGYQSGGLADDDLESTGGIGTSllgeggggldmrfsSLTGVIPQVEKGRFERMLFRATRGNCFPHFMEIEQAFADPNtgQLVQKMAFVVFYKSKTIETKIKKICGAFDARLYSVPDLND 230
                 789*****************************666555555555577777777888878999*******************************************99.3.55555555555555555222222224455566666666689***************************************999***********************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      540  (0.0394968); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.61
# Mc/sec: 954.61
//
Query:       MMETSP1325-20131115|4195_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|4192_1  [L=976]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-23   81.1   0.0    7.5e-12   45.4   0.0    2.5  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
    3.9e-09   36.5   0.6      0.026   14.5   0.0    4.4  2  PF13401.1  AAA domain
    5.2e-06   27.1   5.3      0.032   14.9   1.0    3.7  3  PF13207.1  AAA domain
    2.1e-05   24.0  14.7     0.0039   16.8   0.0    4.3  2  PF13245.1  Part of AAA domain
    3.2e-05   24.1   1.7       0.12   12.5   0.0    3.0  2  PF13238.1  AAA domain
    5.1e-05   23.0   0.4       0.37   10.5   0.0    3.0  2  PF13671.1  AAA domain
    5.6e-05   22.7   0.7       0.38   10.3   0.0    3.0  2  PF07728.9  AAA domain (dynein-related subfamily)
    0.00011   21.2   0.0       0.36    9.8   0.0    2.5  2  PF01078.16 Magnesium chelatase, subunit ChlI
    0.00051   20.0   0.0        0.7    9.9   0.0    2.7  2  PF00910.17 RNA helicase
     0.0013   18.6   2.3       0.59    9.9   0.0    3.1  3  PF13521.1  AAA domain
     0.0017   17.8   0.1        2.6    7.4   0.0    3.3  3  PF13086.1  AAA domain
     0.0044   17.2   8.3       0.47   10.6   0.0    4.3  5  PF13191.1  AAA ATPase domain
  ------ inclusion threshold ------
      0.014   14.8   0.2        6.2    6.2   0.0    2.5  2  PF13479.1  AAA domain
       0.02   14.6   0.0        2.5    7.9   0.0    2.4  2  PF06309.6  Torsin
      0.022   14.2   1.0        2.1    7.7   0.1    3.0  3  PF00485.13 Phosphoribulokinase / Uridine kinase family
      0.042   12.9   0.1        8.8    5.3   0.0    2.3  2  PF08433.5  Chromatin associated protein KTI12
      0.049   12.4   0.1         14    4.3   0.0    3.4  3  PF09848.4  Uncharacterized conserved protein (DUF2075)
       0.09   12.2   0.2        3.1    7.2   0.0    2.7  2  PF05729.7  NACHT domain
      0.099   11.9   0.5        5.7    6.2   0.0    3.5  3  PF05707.7  Zonular occludens toxin (Zot)


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0     6e-11   4.3e-08       3      99 ..     167     278 ..     165     312 .. 0.73
   2 !   45.4   0.0     1e-14   7.5e-12       2     128 ..     452     582 ..     451     586 .. 0.77

  Alignments for each domain:
  == domain 1    score: 33.2 bits;  conditional E-value: 6e-11
                 EE-------HHHHHHHHHHC.......THEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH............SS..TTHCHHHHHHHHHHHHHTTTT CS
  PF00004.24   3 lyGppGtGKTllakavakel.......gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr............sgseseeeervvnqLlteldgvkkk 99 
                 ++G+pGtGKT++a+   + l       + +++    ++l+ + +g+se+k+++l+++a+     ++l+iDE++ l ++               + + +++ v+++L++ ++g    
  MMETSP1325-20131115|4192_1 167 FIGNPGTGKTTVARLYGQILkelgllsKGDVILATPPDLMGSALGQSEEKTNALLDKAE----GCVLVIDEAYGLDPNGggsaggpgggggIAGGDPFKTAVIDTLVSRVQGDAGA 278
                 89************9888863334444588*************************9973....4*********9988886666666555443445556666666666666666655 PP

  == domain 2    score: 45.4 bits;  conditional E-value: 1e-14
                 EEE-------HHHHHHHHHHC.......THEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SS......GGGS-HHHHHTTSCCEE CS
  PF00004.24   2 llyGppGtGKTllakavakel.......gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnr......pdkldpallrgRfdrki 128
                 ++ G pGtGKT++a+     +       +++++++s+s++   +vg++ +k+r++f++a+      +lfiDE+++l        ++  +++v++++t l + + + +k++vi a++        +k++p l  +R+  +i
  MMETSP1325-20131115|4192_1 452 CFQGSPGTGKTTVARRFGMLFealgvlpSADVVQVSASDFSTGFVGQTGAKTRDIFDSAR-G---AVLFIDEAYRLYDPL---GRSYMQEAVDEIVTLLTEDEYR-GKMVVIFAGYAgqmtdlLNKVNPGLK-SRVSDVI 582
                 789************8776643345555599**************************985.3...6**********9888...7789999999999999999996.66999988776444222333333333.6665555 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.1   8.4e-05      0.06       8      47 ..     166     204 ..     161     245 .. 0.78
   2 !   14.5   0.0   3.6e-05     0.026       9     122 ..     453     555 ..     447     562 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8.4e-05
   PF13401.1   8 vvtGesGvGKTtllrrlarqldeeaeaae.....karvvfveapa 47 
                 v++G++G+GKTt++r + + l+      e     k +v++ ++p+
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVARLYGQILK------ElgllsKGDVILATPPD 204
                 789************9998663......12335555555555555 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 3.6e-05
   PF13401.1   9 vtGesGvGKTtllrrlarqldeeaeaaekarvvfveapast...spkellqkllsalglpakgrltteellealqealrrrrtrlliiDEaqrL.....s...eealeelrslldd.etgvklvlv 122
                 + G +G+GKTt++rr+ + +          +++ v ++a+    s++++ + ++++ g              + ++  +++r  +l iDEa rL     +   +ea++e+++ll   e+  k+v++
  MMETSP1325-20131115|4192_1 453 FQGSPGTGKTTVARRFGMLF----------EALGVLPSADVvqvSASDFSTGFVGQTGA-------------KTRDIFDSARGAVLFIDEAYRLydplgRsymQEAVDEIVTLLTEdEYRGKMVVI 555
                 5699**************87..........34444444443336688888888888885.............345578888888999999999987665157788888887776656444444443 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       9.7     7e+03      16      55 ..       9      47 ..       8      82 .. 0.66
   2 !   14.9   1.0   4.4e-05     0.032       4      77 ..     167     233 ..     165     356 .. 0.72
   3 !   11.7   0.0   0.00043      0.31       3      18 ..     452     467 ..     450     553 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 9.7
                HHHHHHHSTEEEEEGGGB--GGGS-B-----B--SSGGGB CS
   PF13207.1 16 akeLaerlglpvlslddllreeglkelddgereskdadad 55
                a +  +r++lp ++ d+l +e   + +  + +++++ad++
  MMETSP1325-20131115|4192_1  9 ASRFRRRYNLPDFNDDEL-IELLHRTISSTKPNYHVADDK 47
                666778889998887773.222222333444444444444 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 4.4e-05
                 -B--TT---HHHHHHHHHHS.TEEEEEGGG.B--G.GGS-B-----B--SSGGGB-HHHHHHHH....H..HHHHHH CS
   PF13207.1   4 itGppGsGKsTlakeLaerl.glpvlsldd.llre.eglkelddgereskdadadllaaildglaakkdtlswvidg 77 
                 ++G pG+GK+T+a++  + l  l  ls +d +l + ++l +   g     ++  ++l + ++g        ++vid 
  MMETSP1325-20131115|4192_1 167 FIGNPGTGKTTVARLYGQILkELGLLSKGDvILATpPDLMGSALGQ---SEEKTNALLDKAEGC-------VLVIDE 233
                 57*************9998754557888885543324444444444...344555555555555.......255555 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 0.00043
                 --B--TT---HHHHHH CS
   PF13207.1   3 aitGppGsGKsTlake 18 
                 ++ G pG+GK+T+a++
  MMETSP1325-20131115|4192_1 452 CFQGSPGTGKTTVARR 467
                 778***********98 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   3.5e-05     0.025      10      50 ..     164     202 ..     158     210 .. 0.79
   2 !   16.8   0.0   5.4e-06    0.0039       8      41 ..     437     478 ..     430     509 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.5e-05
   PF13245.1  10 npllvvtGgPGtGKTttlaaiiaallaarekp.grsvllvap 50 
                 n++++  G PGtGKT t+a++  ++l ++    +  v l++p
  MMETSP1325-20131115|4192_1 164 NRVFI--GNPGTGKT-TVARLYGQILKELGLLsKGDVILATP 202
                 67777..********.99999999996666666666666665 PP

  == domain 2    score: 16.8 bits;  conditional E-value: 5.4e-06
   PF13245.1   8 a...gnpl......lvvtGgPGtGKTttlaaiiaallaarekp 41 
                 +   +np+      +  +G PGtGKT t+a++   l++a+ + 
  MMETSP1325-20131115|4192_1 437 NkagRNPVddlaltFCFQGSPGTGKT-TVARRFGMLFEALGVL 478
                 33444777777777555*********.****999999665444 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.1    0.0013      0.91       3      17 ..     167     181 ..     166     217 .. 0.85
   2 !   12.5   0.0   0.00017      0.12       2      19 ..     452     469 ..     452     561 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0013
   PF13238.1   3 itGtpGvGKtTlake 17 
                 + G pG+GKtT+a++
  MMETSP1325-20131115|4192_1 167 FIGNPGTGKTTVARL 181
                 689**********97 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 0.00017
   PF13238.1   2 litGtpGvGKtTlakeLa 19 
                 +++G pG+GKtT+a++  
  MMETSP1325-20131115|4192_1 452 CFQGSPGTGKTTVARRFG 469
                 579************984 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0     0.001      0.73       3      21 ..     166     184 ..     165     230 .. 0.74
   2 !   10.5   0.0   0.00052      0.37       4      32 ..     453     490 ..     451     551 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.001
   PF13671.1   3 llvGlpGsGKstlaerllk 21 
                 +++G pG+GK+t+a+ + +
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVARLYGQ 184
                 699**********997633 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00052
   PF13671.1   4 lvGlpGsGKstlaerl...lkklg......yvrlsqdt 32 
                 + G pG+GK+t+a+r    +++lg       v +s+ +
  MMETSP1325-20131115|4192_1 453 FQGSPGTGKTTVARRFgmlFEALGvlpsadVVQVSASD 490
                 67************954445555544444445555555 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.1   0.00078      0.56       3      23 ..     166     186 ..     164     235 .. 0.86
   2 !   10.3   0.0   0.00053      0.38       2      23 ..     451     472 ..     450     577 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00078
                 EEE------HHHHHHHGGGGB CS
   PF07728.9   3 lLvGppGtgKselaerlaeal 23 
                 + +G+pGtgK+++a+++ + l
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVARLYGQIL 186
                 579************998776 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00053
                 EEEE------HHHHHHHGGGGB CS
   PF07728.9   2 vlLvGppGtgKselaerlaeal 23 
                 ++ +G pGtgK+++a+r+  ++
  MMETSP1325-20131115|4192_1 451 FCFQGSPGTGKTTVARRFGMLF 472
                 699*************986655 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0     0.001      0.75      24      49 ..     164     189 ..     142     197 .. 0.81
   2 !    9.8   0.0    0.0005      0.36      26      59 ..     452     485 ..     448     520 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.001
  PF01078.16  24 nlllvGppGsGKtmlakrlpsllppl 49 
                 n +++G+pG+GKt +a+   ++l +l
  MMETSP1325-20131115|4192_1 164 NRVFIGNPGTGKTTVARLYGQILKEL 189
                 6789*************999999776 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0005
  PF01078.16  26 llvGppGsGKtmlakrlpsllpplseeealevak 59 
                  + G+pG+GKt +a+r+  l+ +l    + +v +
  MMETSP1325-20131115|4192_1 452 CFQGSPGTGKTTVARRFGMLFEALGVLPSADVVQ 485
                 689*************999887766555555444 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0072       5.2       2      36 ..     166     199 ..     165     208 .. 0.82
   2 !    9.9   0.0   0.00097       0.7       2      61 ..     452     509 ..     451     524 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0072
  PF00910.17   2 wlyGpsgeGKStlakeLakallkklklkkkdsvys 36 
                 ++ G++g+GK+t+a+    ++lk+l+l +k++v+ 
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVARL-YGQILKELGLLSKGDVIL 199
                 589**********987.889999998888887766 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00097
  PF00910.17   2 wlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqv 61 
                 +++G++g+GK+t+a+++   ++ +l+   + +v ++ +++df  g+ gq+     D+  +
  MMETSP1325-20131115|4192_1 452 CFQGSPGTGKTTVARRFGMLFE-ALGVLPSADV-VQVSASDFSTGFVGQTGAKTRDIFDS 509
                 799*************666555.5544444444.46799999999999998888887765 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0053       3.8       3      17 ..     166     180 ..     164     189 .. 0.92
   2 !    9.9   0.0   0.00082      0.59       2      20 ..     451     469 ..     450     522 .. 0.71
   3 ?   -3.1   0.2       8.5   6.1e+03      55      79 ..     883     907 ..     848     908 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0053
   PF13521.1   3 vitGgpstGKTtlle 17 
                 v++G p+tGKTt+++
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVAR 180
                 89**********986 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00082
   PF13521.1   2 ivitGgpstGKTtlleaLa 20 
                 +++ G p+tGKTt+++++ 
  MMETSP1325-20131115|4192_1 451 FCFQGSPGTGKTTVARRFG 469
                 7899**********99875 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 8.5
   PF13521.1  55 faeavleaqleqeaaaaaskllfcD 79 
                  +++++e++  + ++a++++ +++D
  MMETSP1325-20131115|4192_1 883 RKKELEEMEEDERKEAEDEEAFIMD 907
                 2233333333333344566666665 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0087       6.3       4      42 ..     148     186 ..     146     234 .. 0.74
   2 !    7.4   0.0    0.0037       2.6      19      34 ..     450     465 ..     428     570 .. 0.73
   3 ?   -1.6   0.0       2.1   1.5e+03     126     165 ..     867     902 ..     825     972 .. 0.60

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0087
   PF13086.1   4 esqleaikealsssg.itliqGpPgtGKtttivelisqll 42 
                 +sq+e ++  l + +   +  G PgtGKt t++ l+ q+l
  MMETSP1325-20131115|4192_1 148 NSQREELELPLAEVSlNRVFIGNPGTGKT-TVARLYGQIL 186
                 678888877777777456788********.6667776664 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0037
   PF13086.1  19 itliqGpPgtGKttti 34 
                   + qG PgtGKtt+ 
  MMETSP1325-20131115|4192_1 450 TFCFQGSPGTGKTTVA 465
                 6789*********765 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 2.1
   PF13086.1 126 seeleelkeklekekkklkqekeklkkeskklkkeleear 165
                 + +l+ +++++    k   ++k++l++ +++ +ke+e ++
  MMETSP1325-20131115|4192_1 867 KPALNAVQAAI----KYEIARKKELEEMEEDERKEAEDEE 902
                 22222222222....2333333333333333333333333 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0028         2      27      42 ..     166     181 ..     143     199 .. 0.78
   2 ?   -2.4   0.0       6.5   4.7e+03     121     140 ..     210     234 ..     184     239 .. 0.63
   3 !   10.6   0.0   0.00065      0.47      24      43 ..     444     468 ..     423     556 .. 0.78
   4 ?   -2.7   0.1         8   5.8e+03      88     101 ..     610     623 ..     566     666 .. 0.52
   5 ?   -2.6   0.0         8   5.7e+03     122     122 ..     844     844 ..     784     902 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0028
   PF13191.1  27 lvtGpsGiGKSsLlre 42 
                 +++G++G+GK++++r 
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVARL 181
                 689***********86 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 6.5
   PF13191.1 121 ldaalartr....rpk..lvlvlDDl 140
                 l + +++t+    +    +vlv+D++
  MMETSP1325-20131115|4192_1 210 LGQSEEKTNalldK-AegCVLVIDEA 234
                 33333333356542.24699999985 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 0.00065
   PF13191.1  24 p.....lllvtGpsGiGKSsLlrel 43 
                        +++ G +G+GK++++r++
  MMETSP1325-20131115|4192_1 444 VddlalTFCFQGSPGTGKTTVARRF 468
                 366665799**************95 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 8
   PF13191.1  88 aelggwreallaal 101
                 ++++++++a++ a+
  MMETSP1325-20131115|4192_1 610 TAAAAAAAAAATAA 623
                 22222222222222 PP

  == domain 5    score: -2.6 bits;  conditional E-value: 8
   PF13191.1 122 d 122
                  
  MMETSP1325-20131115|4192_1 844 K 844
                 2 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0      0.01       7.2       5      21 ..     164     180 ..     161     186 .. 0.83
   2 ?    6.2   0.0    0.0087       6.2       5      23 ..     450     468 ..     447     475 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.01
   PF13479.1   5 kvliYGkpGiGKTslak 21 
                 + +  G pG+GKT++a+
  MMETSP1325-20131115|4192_1 164 NRVFIGNPGTGKTTVAR 180
                 56789*********997 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0087
   PF13479.1   5 kvliYGkpGiGKTslaktl 23 
                 +++  G pG+GKT++a+++
  MMETSP1325-20131115|4192_1 450 TFCFQGSPGTGKTTVARRF 468
                 567789*********9987 PP

>> PF06309.6  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.057        41      53      84 ..     162     193 ..     146     200 .. 0.81
   2 ?    7.9   0.0    0.0034       2.5      34      71 ..     429     466 ..     420     488 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.057
   PF06309.6  53 pLvlsfhGwtGtGknfvaeiiaenlyrdGlrs 84 
                 +L   f G +GtGk  va++  + l + Gl s
  MMETSP1325-20131115|4192_1 162 SLNRVFIGNPGTGKTTVARLYGQILKELGLLS 193
                 5666799************9888887777766 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0034
   PF06309.6  34 kklvvksvkaylenekpkkpLvlsfhGwtGtGknfvae 71 
                  + v+++ +   +n+  + +L++ f G +GtGk  va+
  MMETSP1325-20131115|4192_1 429 YQAVIEAANKAGRNPVDDLALTFCFQGSPGTGKTTVAR 466
                 57788888888888999999**************9998 PP

>> PF00485.13  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.052        37       6      38 ..     169     200 ..     166     225 .. 0.73
   2 ?   -3.1   0.0         6   4.3e+03     140     178 ..     321     359 ..     315     365 .. 0.67
   3 ?    7.7   0.1    0.0029       2.1       6      37 ..     455     486 ..     452     504 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.052
  PF00485.13   6 gsSGaGkttvarklesifgrekvkaaeldsflr 38 
                 g+ G Gkttvar   +i+++ ++ ++ +d++l 
  MMETSP1325-20131115|4192_1 169 GNPGTGKTTVARLYGQILKELGLLSK-GDVILA 200
                 788***************98877743.455544 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 6
  PF00485.13 140 elaqklqRDiaeRGrsleavldsiearkpdyvkyiapqf 178
                  l + l R ++ RG+s+   +++ + r++  ++ ++p f
  MMETSP1325-20131115|4192_1 321 ALLRILLRNVQRRGKSVSFDTAKQAVRRDLAKARMRPNF 359
                 566778999999999987666666655555555555555 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0029
  PF00485.13   6 gsSGaGkttvarklesifgrekvkaaeldsfl 37 
                 gs G Gkttvar++  +f+  +v +   ++ +
  MMETSP1325-20131115|4192_1 455 GSPGTGKTTVARRFGMLFEALGVLPSADVVQV 486
                 899****************9999887744443 PP

>> PF08433.5  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.014       9.8       5      29 ..     166     194 ..     165     219 .. 0.82
   2 ?    5.3   0.0     0.012       8.8       6      36 ..     453     487 ..     450     502 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.014
   PF08433.5   5 vltGlPssGKstvakeLakalee....eg 29 
                 v+ G P +GK+tva+   + l+e    ++
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVARLYGQILKElgllSK 194
                 799************99999988555544 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.012
   PF08433.5   6 ltGlPssGKstvakeLakalee....egrsvvvis 36 
                 + G P +GK+tva+++   +e+       +vv +s
  MMETSP1325-20131115|4192_1 453 FQGSPGTGKTTVARRFGMLFEAlgvlPSADVVQVS 487
                 67**************9999986666555555555 PP

>> PF09848.4  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.069        50       8      18 ..     169     179 ..     165     234 .. 0.85
   2 ?    4.3   0.0      0.02        14       6      18 ..     453     465 ..     449     475 .. 0.85
   3 ?    0.5   0.0      0.28     2e+02      85     117 ..     513     545 ..     495     562 .. 0.68

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.069
   PF09848.4   8 GvaGtGKtvva 18 
                 G++GtGKt va
  MMETSP1325-20131115|4192_1 169 GNPGTGKTTVA 179
                 9*******997 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.02
   PF09848.4   6 vtGvaGtGKtvva 18 
                  +G +GtGKt va
  MMETSP1325-20131115|4192_1 453 FQGSPGTGKTTVA 465
                 59********998 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.28
   PF09848.4  85 dvvivDEAhrlltkkdqkekksgenqlkellkr 117
                  v+++DEA rl +   + + ++  +++ +ll +
  MMETSP1325-20131115|4192_1 513 AVLFIDEAYRLYDPLGRSYMQEAVDEIVTLLTE 545
                 6999********955554444444455554444 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.19   1.3e+02       5      18 ..     167     180 ..     165     199 .. 0.84
   2 ?    7.2   0.0    0.0043       3.1       2      21 ..     450     469 ..     449     483 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.19
   PF05729.7   5 lqGeaGsGKTtLlq 18 
                   G +G GKTt ++
  MMETSP1325-20131115|4192_1 167 FIGNPGTGKTTVAR 180
                 67*********886 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0043
   PF05729.7   2 tvilqGeaGsGKTtLlqkla 21 
                 t + qG +G GKTt ++++ 
  MMETSP1325-20131115|4192_1 450 TFCFQGSPGTGKTTVARRFG 469
                 6789************9985 PP

>> PF05707.7  Zonular occludens toxin (Zot)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.55     4e+02       4      17 ..     166     179 ..     165     191 .. 0.89
   2 ?   -1.5   0.0       1.8   1.3e+03      78      88 ..     224     234 ..     211     241 .. 0.77
   3 ?    6.2   0.0    0.0079       5.7      69     106 ..     501     536 ..     449     545 .. 0.75

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.55
   PF05707.7   4 lvtGkpGsGKtlea 17 
                 ++ G+pG+GKt +a
  MMETSP1325-20131115|4192_1 166 VFIGNPGTGKTTVA 179
                 568********987 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1.8
   PF05707.7  78 dkgallviDEc 88 
                 ++g +lviDE+
  MMETSP1325-20131115|4192_1 224 AEGCVLVIDEA 234
                 489*******9 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.0079
   PF05707.7  69 kyldkwrtldkgallviDEcqqifpvragegkkvpevl 106
                 ++ ++ ++ ++ga+l+iDE+ +++ +  +    ++e +
  MMETSP1325-20131115|4192_1 501 AKTRDIFDSARGAVLFIDEAYRLYDPLGRS--YMQEAV 536
                 44455555569***********99876664..455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (976 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       903  (0.0660474); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        89  (0.00650965); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 1.68u 0.33s 00:00:02.00 Elapsed: 00:00:00.80
# Mc/sec: 2923.56
//
Query:       MMETSP1325-20131115|4196_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00072   19.2   0.0    0.00086   18.9   0.0    1.2  1  PF00168.25 C2 domain
  ------ inclusion threshold ------
      0.045   13.4   0.0      0.056   13.1   0.0    1.2  1  PF00792.19 Phosphoinositide 3-kinase C2


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.3e-07   0.00086      26      84 ..      31      86 ..       9      87 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1.3e-07
                EEEECTTEEEEEE--BSS-SSEEEEEEEEEEESCGGGTEEEEEEEECHSSSCSEE---E CS
  PF00168.25 26 vslggakskkkrTrvikntlnPvWnekftfevvaeelaeleleVkdedrfgkddflGea 84
                 +l +a+ k + Tr  + t   +W+e++ ++ + +  ael ++V +++++g+d flG+a
  MMETSP1325-20131115|4196_1 31 RQLCNARTKPHSTRSERGT--QTWDEEVLLP-SVPANAELCFTVAEQCSLGRDNFLGQA 86
                4455544455777777777..48********.9999999******************98 PP

>> PF00792.19  Phosphoinositide 3-kinase C2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   8.2e-06     0.056      14      91 ..      29      98 ..      14     107 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 8.2e-06
                ---ECE-EEEE---ECSS...SC-EEEEEEEEEEECCC--TT-EEEEEEE-------..---EEEEEEEEESB-TTSBB- CS
  PF00792.19 14 ggellskpvqstsykpfs..fksvkwnewltfpikisdLPrdArLvitiyevseksksekkkellgwvnlsLfdkkgiLr 91
                 g++l+ +  +t++ +++    +++w+e + +p    + P +A L++t+ e  +  ++    ++lg++ ++L+++  +L+
  MMETSP1325-20131115|4196_1 29 TGRQLC-NA-RTKPHSTRseRGTQTWDEEVLLP----SVPANAELCFTVAEQCSLGRD----NFLGQAVMPLTPQLATLT 98
                689999.44.66666666577789999877766....78***********98888887....8*********99987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 550.65
//
Query:       MMETSP1325-20131115|4197_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1447.03
//
Query:       MMETSP1325-20131115|4200_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.52
# Mc/sec: 179.73
//
Query:       MMETSP1325-20131115|4202_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-16   59.2   1.6    5.7e-16   58.5   1.1    1.3  1  PF07500.9  Transcription factor S-II (TFIIS), central domain
     0.0033   16.8   0.8     0.0056   16.1   0.5    1.4  1  PF01096.13 Transcription factor S-II (TFIIS)


Domain annotation for each model (and alignments):
>> PF07500.9  Transcription factor S-II (TFIIS), central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   1.1   8.3e-20   5.7e-16       4     107 ..      25     122 ..      24     129 .. 0.92

  Alignments for each domain:
  == domain 1    score: 58.5 bits;  conditional E-value: 8.3e-20
                 HHHHHHHHHHHHHTTSSSS-..STTHHHHHHHHHHHHHHHHTS-SSTHHHHHHHHHHHHHHSSS-SHHHHHHH----TTHHHH--TTTTSS-SHHHHHHHHHHH CS
   PF07500.9   4 svrdkcrellaaalakdseeketeeevdslaaeieeelfkeikntdkkYknkvRslifNLkdpkNpdLrkkvlageisperlvsmsaeElasdelkqereeltk 107
                 ++r  +re l ++l+++     ++    ++a++ e+++  ++   +k+Y +k+R l fNLk  kN +Lr +v   e+++e+lv+m++++la +e+k++ ee+++
  MMETSP1325-20131115|4202_1  25 QMRMTVREKLRQVLMTEY----DGPPLYDVAEATEAAIEAKFAGDQKAYGDKFRQLAFNLK--KNAQLRYSVNRLETTAEELVNMTPKDLATQEKKKAMEEMAQ 122
                 678888999999998874....578999999999999999999999***************..**************************************987 PP

>> PF01096.13  Transcription factor S-II (TFIIS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.5   8.3e-07    0.0056       2      22 ..     154     174 ..     153     177 .. 0.95

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 8.3e-07
  PF01096.13   2 kCpkCgsreayffqlQtRsaD 22 
                 +C +C+s+++   ++QtRsaD
  MMETSP1325-20131115|4202_1 154 TCGRCKSQKIKNSEAQTRSAD 174
                 8*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       809  (0.059172); expected 273.4 (0.02)
Passed bias filter:                      488  (0.0356934); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.56
# Mc/sec: 950.13
//
Query:       MMETSP1325-20131115|4198_1  [L=565]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.90u 0.35s 00:00:01.25 Elapsed: 00:00:00.71
# Mc/sec: 1906.96
//
Query:       MMETSP1325-20131115|4203_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       579  (0.0423493); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 891.28
//
Query:       MMETSP1325-20131115|4201_1  [L=298]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-08   33.6   6.4    2.2e-07   29.8   4.4    2.0  1  PF03092.11 BT1 family
    5.1e-05   22.0  16.0    5.1e-05   22.0  11.1    2.6  2  PF07690.11 Major Facilitator Superfamily
     0.0071   16.0   2.5       0.05   13.2   0.2    2.5  2  PF01456.12 Mucin-like glycoprotein
  ------ inclusion threshold ------
       0.14   11.6   0.4       0.34   10.4   0.2    1.7  2  PF02096.15 60Kd inner membrane protein
       0.14   10.7   5.0      0.052   12.1   0.9    1.9  2  PF03611.9  PTS system sugar-specific permease component
       0.14   11.7   0.2       0.32   10.5   0.1    1.5  1  PF11694.3  Protein of unknown function (DUF3290)
        0.9    9.7   0.0        0.9    9.7   0.0    2.9  4  PF09990.4  Predicted membrane protein (DUF2231)
        4.4    4.7   4.3        6.8    4.1   2.9    1.2  1  PF13779.1  Domain of unknown function (DUF4175)


Domain annotation for each model (and alignments):
>> PF03092.11  BT1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   4.4   1.3e-10   2.2e-07     153     412 ..      10     288 ..       7     294 .. 0.73

  Alignments for each domain:
  == domain 1    score: 29.8 bits;  conditional E-value: 1.3e-10
  PF03092.11 153 trisvlvsaalqlltlvdalvllee.rkereal..evlelgkpvvpcllglnrevisrlwkilvy....aeiladtltalsfwalplviakadvfylatnelkgPnfsyeflgtvkvigsiagligvtlfnrllkklsyRlvfivttvlqvlaglf...........dlilvkrwnlklG...isDh.vyilgdsvvlevlymlkfmPlvvllsrLCPrGsEsvvfAllasianlgqivSsslGalLmeylg..vtedqfsnlsllllveslaallplpLlfll 412
                  ++++ + aa+ l++++   v++++   + +a     + l   v  c++gl++  + +  +  +      + +++ l +l++  ++++  ++  +y +t+ l   + s+  +   ++ +s  +++g +l+  + + +++R vf+vtt+  +lagl+           d +l+    ++ G     D+  y +  +vv+ +   ++  P +vl+    P+    + +A+  si+  g + S+++ a ++  lg    +d++  ls+l+ ++ ++++ +l Ll l+
  MMETSP1325-20131115|4201_1  10 VQFVIWLCAAVMLVEILLIWVSVKDlVINEDAWwnWLYALLAIVALCCVGLIKAIVDKAANKRREldriLSLIMPAL-FLFVYNATPS--SGGEIYTYTYRLF-YSDSPCRFQYLQLTSSATSVVGYLLYGSVCNRRRIRSVFLVTTLSAALAGLLwiplsnasleaDCVLLGTGPRH-GhtpCMDKyTYAVLTTVVAGLFGTFATAPSTVLATESSPKEQKTIAYAVFLSIIDSGASASGWITAPIVRHLGidYLTDDWGGLSTLIWICTFSQVGVLLLLPLV 288
                 57778888888888877777777765444444443344455556778888766666554444433422244445555.6777776665..4457999999999.344666778889999***********************************973333333333355555443332.122245777*********************************************************99999996666778***********99986655555443 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0  11.1     3e-08   5.1e-05     145     351 ..      37     242 ..       6     245 .. 0.77
   2 ?    0.3   1.0      0.12   2.1e+02      12      51 ..     239     287 ..     228     291 .. 0.49

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 3e-08
  PF07690.11 145 lasslgWravFlilailsllaavlvllllprepperkrkspaeelrkepaplvpawklllkppvlwillialllfffvfsglltllplylqevlglsp...glllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalglallaft.....................ssavwlllvlvliGfglglvfptllalasdlappeerGtasglfntagslgga 351
                 + + ++W++++ +lai++l +  ++l+   +++ ++kr  + ++     + + p             +l++++++++  sg  +++ +y +  +  sp    +l+++   ++++++g    ll g + +r   r   l++ l+++la+l++++l+++                     ++++ ++l  v++G++  ++++++++la+++ p+e+   a+++f ++   g++
  MMETSP1325-20131115|4201_1  37 INEDAWWNWLYALLAIVALCC--VGLIKAIVDKAANKRR-ELDR---ILSLIMP-------------ALFLFVYNATPSSGGEIYTYTY-RLFYSDSPcrfQYLQLT--SSATSVVG---YLLYGSVCNRRRIRSVFLVTTLSAALAGLLWIPLSNAsleadcvllgtgprhghtpcmDKYTYAVLTTVVAGLFGTFATAPSTVLATESSPKEQKTIAYAVFLSIIDSGAS 242
                 557788****99999999998..3223333333333332.2333...2233333.............6666666666666677777776.66666666877789999..99999999...99********888888888888888888888888888999999999999999999998888888889999********************************998887776 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.12
  PF07690.11  12 rsilgpalpl.alaedlg........ispseigwlltlyslgyaiasll 51 
                 +++ ++      + ++lg           s++ w++t+  +g +++ +l
  MMETSP1325-20131115|4201_1 239 SGASASGWITaPIVRHLGidyltddwGGLSTLIWICTFSQVGVLLLLPL 287
                 4443333333344444441111222114555777777777777777765 PP

>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.091   1.6e+02       7      20 ..      46      59 ..      43      74 .. 0.70
   2 !   13.2   0.2     3e-05      0.05      71     131 ..     191     252 ..     177     257 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.091
  PF01456.12  7 LcalLvlaLcCCas 20
                L+alL ++  CC  
  MMETSP1325-20131115|4201_1 46 LYALLAIVALCCVG 59
                89999765556654 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 3e-05
  PF01456.12  71 kttkattttttttttttateaPsdavttaeaPtttttrapsr.lrevdGslsssaWvcaPLl 131
                 k t a  tt       t + aPs+ ++t  +P  ++t a +  l  +d + s+s W++aP++
  MMETSP1325-20131115|4201_1 191 KYTYAVLTTVVAGLFGTFATAPSTVLATESSPKEQKTIAYAVfLSIIDSGASASGWITAPIV 252
                 45566666777777778889***999999*******99877527789*************97 PP

>> PF02096.15  60Kd inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.2    0.0002      0.34     106     177 ..      32     103 ..      10     110 .. 0.71
   2 ?   -2.1   0.0       1.3   2.3e+03     118     134 ..     195     211 ..     142     241 .. 0.51

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0002
  PF02096.15 106 iedL.sapda..lipllilpilagltlflsqklssksqkskdkqaaaqqkimnyimplmflfiflsfP.aglllYw 177
                 ++dL  ++da  ++ +++l+i+a  ++ l+  +     ++ +++  +  +i++ imp +flf+    P +g  +Y 
  MMETSP1325-20131115|4201_1  32 VKDLvINEDAwwNWLYALLAIVALCCVGLIKAI----VDKAANKRRELDRILSLIMPALFLFVYNATPsSGGEIYT 103
                 555532333355666666666666666666666....4778888999*******************9966666665 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.3
  PF02096.15 118 llilpilagltlflsqk 134
                 +++ +++agl+  + + 
  MMETSP1325-20131115|4201_1 195 AVLTTVVAGLFGTFATA 211
                 33333333333333333 PP

>> PF03611.9  PTS system sugar-specific permease component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.9   3.1e-05     0.052      99     160 ..      17      94 ..       9     107 .. 0.80
   2 ?   -0.8   0.1      0.26   4.4e+02     135     165 ..     129     169 ..     119     219 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.1e-05
   PF03611.9  99 llvglivNiilvrftklksifltghvmlqqaavvagllvvalfkn.................lglviigglllglywlv 160
                    +++v+i+l+ ++ +k++ ++ + + ++ +++ ++++ ++++                  ++ +i+ +l+l +y ++
  MMETSP1325-20131115|4201_1  17 CAAVMLVEILLI-WVSVKDLVINEDAWWNWLYALLAIVALCCVGLikaivdkaankrreldrILSLIMPALFLFVYNAT 94 
                 3478********.**************************9999776777777777777777666666667777776665 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.26
   PF03611.9 135 llvvalfkn..........lglviigglllglywlvlsalt 165
                 ++ ++l+++          +++ ++++ l gl+w+ ls++ 
  MMETSP1325-20131115|4201_1 129 VVGYLLYGSvcnrrrirsvFLVTTLSAALAGLLWIPLSNAS 169
                 33333333344467777777777788888888888887764 PP

>> PF11694.3  Protein of unknown function (DUF3290)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00019      0.32       8      59 ..      36      85 ..      32      94 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00019
   PF11694.3  8 llsqintqnllrviliilllvvliilailylrhkkdtkyrdLsIilllllll 59
                + ++ +++n+l ++l i++l++++  +i+++ +k ++k r+L  il l++ +
  MMETSP1325-20131115|4201_1 36 VINEDAWWNWLYALLAIVALCCVG--LIKAIVDKAANKRRELDRILSLIMPA 85
                667788888887777777777766..579999**********9888777544 PP

>> PF09990.4  Predicted membrane protein (DUF2231)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.4         8   1.4e+04      47      52 ..      19      24 ..      11      32 .. 0.42
   2 ?    9.7   0.0   0.00053       0.9       5      38 ..      41      74 ..      38     133 .. 0.79
   3 ?   -3.0   0.0         5   8.6e+03      14      25 ..     150     161 ..     147     172 .. 0.72
   4 ?    3.3   0.1     0.055        94      11      44 ..     194     231 ..     191     282 .. 0.69

  Alignments for each domain:
  == domain 1    score: -4.3 bits;  conditional E-value: 8
   PF09990.4 47 gvllla 52
                +v+l+ 
  MMETSP1325-20131115|4201_1 19 AVMLVE 24
                222222 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00053
   PF09990.4  5 swwnllaalvigflavaaGlvelllaepsiraks 38
                +wwn+l al+++++   +Gl+ +++ +  +++++
  MMETSP1325-20131115|4201_1 41 AWWNWLYALLAIVALCCVGLIKAIVDKAANKRRE 74
                8***********************9955554333 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 5
   PF09990.4  14 vigflavaaGlv 25 
                 v+++ a++aGl+
  MMETSP1325-20131115|4201_1 150 VTTLSAALAGLL 161
                 677788888875 PP

  == domain 4    score: 3.3 bits;  conditional E-value: 0.055
   PF09990.4  11 aalvigflavaaGlvel....llaepsirakstallHa 44 
                  a++++++a ++G++ +    +la++s+ +++ ++ +a
  MMETSP1325-20131115|4201_1 194 YAVLTTVVAGLFGTFATapstVLATESSPKEQKTIAYA 231
                 56777777777777764111133333334444444444 PP

>> PF13779.1  Domain of unknown function (DUF4175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   2.9     0.004       6.8       7      70 ..      14      77 ..      10      84 .. 0.93

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.004
   PF13779.1  7 lwpllsvlllflalsllglwdllpplvvlallvlfalaalaalvlpllrfrwpsraealarlda 70
                +w+ ++v+l+ + l ++ + dl+  +  ++  + ++la++a+++++l++  + ++a+  + ld+
  MMETSP1325-20131115|4201_1 14 IWLCAAVMLVEILLIWVSVKDLVINEDAWWNWLYALLAIVALCCVGLIKAIVDKAANKRRELDR 77
                8999********************************************9999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       614  (0.0449093); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.67u 0.34s 00:00:01.01 Elapsed: 00:00:00.56
# Mc/sec: 1275.20
//
Query:       MMETSP1325-20131115|4199_1  [L=1708]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-87  292.3   0.0    5.3e-87  291.7   0.0    1.3  1  PF00501.23 AMP-binding enzyme
    3.5e-27   95.9   0.0    9.1e-27   94.6   0.0    1.7  1  PF00975.15 Thioesterase domain
    5.6e-14   52.1   0.1    6.4e-13   48.6   0.0    2.5  2  PF10442.4  FIST C domain
    2.5e-12   46.2   6.7    3.2e-12   45.9   1.8    3.2  3  PF08495.5  FIST N domain
    3.4e-09   36.7   0.0      1e-08   35.1   0.0    1.9  1  PF00550.20 Phosphopantetheine attachment site
    1.6e-08   34.6   0.4    7.6e-08   32.4   0.0    2.3  2  PF12697.2  Alpha/beta hydrolase family
    4.2e-05   23.1   0.0    0.00013   21.5   0.0    1.9  1  PF08415.5  Nonribosomal peptide synthase
     0.0013   18.1   0.0     0.0026   17.2   0.0    1.4  1  PF00561.15 alpha/beta hydrolase fold
     0.0015   18.2   0.0     0.0045   16.6   0.0    1.8  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.072   12.3   0.0       0.14   11.3   0.0    1.4  1  PF11187.3  Protein of unknown function (DUF2974)


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.7   0.0   3.9e-90   5.3e-87       1     418 []     176     612 ..     176     612 .. 0.93

  Alignments for each domain:
  == domain 1    score: 291.7 bits;  conditional E-value: 3.9e-90
                 EHHHHHHHHHHHHHHHHH----TT-EEEEE-SSSHHHHHHHHHHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHHHHHHHHHHHCTTCTT.ECC.....S-E.ECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTSEEEEES-TTCCHHCTTTHHHHTT.T-EEEEESSCCTT-HHHHHHHHHHCT-SEEE--HHHHHHHHHHCHC.....CCTTTTT--EEEE-----THHHHHHHHHHTT.SEEEEEE--CGGSSESEECCS-HHH...CCH---EBSTTTEEEEEBSTT.-BEE-S----EEEESTTS--B-TT-HHHHHHHBCCSTT....EEE---EEEE-TT--EEEE--GGGEEE----EEEHHHHHHHHHTSTTEEEEEE CS
  PF00501.23   1 TYreldervnrlaagLrklGvkpgdrVaillpnspewviaflaclkaGavyvplyptlpaerlayilndseakvlitddelltklleaaskelakekliivr.tdk.....eed.svgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpddrvlsllplhfdgsilellaplll.Gatvvlvspedlkdpalllddiekykvtvlalvptvlelllkaiek.....kkldlsslrlilsggeplspellerlreafggirivngYGltEttgvvtvslpgdee..tkpgsiGrplpgvevkivdeeg.kevppgevGEllirgpgvakGYlkdpeltaeafdedgw....lyrTGDlgrldedGyleiiGRkkdqikirGeniepgeiEsallehpgvaeaaV 418
                 T++ l e +   a  L +l   + + V ill +++e v+a++a+l +G  yvpl+ ++p+er+ +i++  +a+v++t+++ +   ++ +  + +++  ++   ++k     + + + ++   +++++ +++ +  ++++p +   +ayii+TSG+TG PKGV + h++  +++  + er+g+t++drvlsl++l+fd+s+++l++ l   G+ vv+++p + k p+ +ld++e+++vt ++++p v+ +ll+ +       ++  + +lr+++++g+ +s +  + l++ +++++++ + G tE+++++++++++  +  + + + Gr+l++ +++++  eg ++vp  ++GE++i+g g+a GY++d+++t++af+  +     +yrTGDlgr++++G++ei+GR++ q+ki+G++ie g++E+al++ +gv+ea+V
  MMETSP1325-20131115|4199_1 176 TFSSLTESAAMYAGQLEALVPNQYSPVPILLHKGAEQVVAVMAALLSGRSYVPLNVSWPEERILQIISILDARVVLTTEKAAGPYEKGQVWQRVQRIDVDLGlEQKrrkrmK-SsDPKKGPAETMHDVMQRLKGMNQASPEELMRTAYIIFTSGSTGVPKGVTIRHEGASNTCIDCVERYGITASDRVLSLASLSFDLSVFDLFGILSQaGGSVVMPDPAQEKMPEHWLDLMERHQVTLWNTAPPVMSMLLEYVLHtpgmiDRFRKLKLRVVMLSGDFISLAIPRHLHAMLPDCEVISMGGATEASIWSCWHRISRLReyQGSIPYGRALANQSLHVLSREGlQPVPMLVEGEIVIGGVGLAAGYHNDKAKTNAAFVWSDHlrqiVYRTGDLGRVHPNGEVEIMGRVDFQLKINGYRIEIGDVEAALRAADGVDEACV 612
                 78999999*************************************************************************9999998888877766666666444777642.257777888888888888888888888899999*************************************************************861566666666666********************************99**************************************************************999*******************************************************855559*******************************************************9 PP

>> PF00975.15  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.0   6.6e-30   9.1e-27       2     196 ..     840    1082 ..     839    1107 .. 0.79

  Alignments for each domain:
  == domain 1    score: 94.6 bits;  conditional E-value: 6.6e-30
                  EEEES------HHCCHHHHHHHSSSEEEEEECCSTTC----TTTTHHHHHHHHHHHHHHHH--...S-...SEEEE------HHHHHHHHHHHHHS--CEEEEEESS-ESSS-CGGGTT-CCHHT................................HHHHHCCHHHH.CCCCTTCCHCCHHHHHHHHHHHHHHTCC-........-CTSECCHHCEEEEEEGCS-SCCCCCCCCC-S....TTTT CS
  PF00975.15    2 pLfcfppagGsasvyrklarklpdplveflaiqlpgrerdepllesieelaeeyaealrqiqp...eg...PyaLfGySlGGllAfevArqLerqgeevasLiliDapapsekakeashllgdee................................lvaelrdiggt.pealledeellsellpalradkralenys........irpiaaqkvdatlfygsddplneldtllaaar....wrey 196 
                  pLf + p +G+ s+y++l++ lpd+  +f+a+q pg e++e++ +++ee+a+ ++ +++++      g    + L+G+S+GG++A evA qL +qg +v+s++l+D+paps +    s l + +e                                 va l+ ++++ p+ + +  e + ++l +++a+ ral  y+        + ++a++++  ++++++++++ +l+ +  a++    wre 
  MMETSP1325-20131115|4199_1  840 PLFFVAPVSGTISCYYHLSKLLPDQ--PFYALQHPGLEEGEEVFTTVEEMAASFVTSIKKLLAtlpGGidgNFSLGGWSMGGVIACEVALQLLEQGVAVRSVVLVDSPAPSGETIDMSNLSTTAElalsyanditayrienllptidelmglsddevEVAVLESLRHNePALVTMTRERFGRALQVYAANTRALAAYTpsrtsalfQSQSANPRL-TLYLLRAETTNPHLSRYPGASSigfgWREL 1082
                  9***********************6..***************************999887654222444449**************************************96555555555555599*****************************988888888988899999***********************776664444333333322.333335555555555555555466666665 PP

>> PF10442.4  FIST C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.46   6.3e+02      64     104 ..    1209    1255 ..    1205    1274 .. 0.77
   2 !   48.6   0.0   4.7e-16   6.4e-13       1     135 [.    1462    1620 ..    1462    1621 .. 0.76

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.46
   PF10442.4   64 lmlrdaealiadarraleea.....agrepagallfdCagR.kllfg 104 
                   m++d e+l++dar  l++a       r+  ++  f C+++ +++  
  MMETSP1325-20131115|4199_1 1209 AMHTDGEQLKDDARVRLATAdayssLIRKLMAVPHFVCVAAaAGVNM 1255
                  69******************999985589999999999999665444 PP

  == domain 2    score: 48.6 bits;  conditional E-value: 4.7e-16
   PF10442.4    1 Alevyrealgeeseeelel....aqls.......lplgle........r.geeyesvrhpigvdpeegslafaedveeGtelqlmlrdaealiadarraleea........agrepagallfdCagRkllfgeaedde.veivrealgddvplaGfftyGEigp 135 
                  A++vy +++ge + e+ ++       +       + lg+           +++  s+ hp  + p +g+la++++veeG+++ +m+++ ++l++++ +a++e           ++ +gal ++C g +l  g +  +   + ++ al+++ p+  +ftyGE+g 
  MMETSP1325-20131115|4199_1 1462 AADVYGQWVGEALPEYQNAlrnfH--EnkptapvHILGVTslrpigrvPtQGDATSLIHPECIMP-DGGLALFAAVEEGEKIMMMEATIDDLVDQMSEATKEEyddgivsfM-PQLKGALAIYCGGCSLTVGHDRLESvGTNISAALSRK-PFLTCFTYGEVGT 1620
                  678888888877664444422220..133333335555543333333342444444********9.*******************************************964.69*********999999996666663566******98.**********985 PP

>> PF08495.5  FIST N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.3   1.8e+03       6      40 ..     445     478 ..     441     480 .. 0.84
   2 !   45.9   1.8   2.3e-15   3.2e-12       3     197 ..    1243    1460 ..    1241    1461 .. 0.80
   3 ?   -0.7   0.0      0.44     6e+02      19      50 ..    1596    1625 ..    1586    1628 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.3
   PF08495.5   6 lvFvssaydeeaellealrealpgvpvvGcstage 40 
                 +v  s+++ + a + ++l + lp++ v+ + +a e
  MMETSP1325-20131115|4199_1 445 VVMLSGDFISLA-IPRHLHAMLPDCEVISMGGATE 478
                 577889999999.99*************9877765 PP

  == domain 2    score: 45.9 bits;  conditional E-value: 2.3e-15
   PF08495.5    3 dlvlvFvssaydeeaellealrealp.gvpvvGcstageittedegepalsvtllalpsaelrvfsgliedlslddlesaaeageelvealrsdg........dpfalllvdglsgneeelleglddaagpsvpivGGlAgdglrfe.rtvvfan............gqvyed.......gavvvllsgslkfgtavaqgfepi.gepfvVTkaegnvvleLdge 197 
                   +v v + +  + +a +l+a+   +p +++v+  s++++  +  +g ++ s + ++ ++  + +  + i+  s +  ++ +eag+ + +a+ + +        + + l++v  ++g ee +l+g+ +    +vp +GG+A+d++    + +v a                  +       g+vv+l+ +s++ + ++++ ++ + + + ++Tkaeg+v++e+dg+
  MMETSP1325-20131115|4199_1 1243 HFVCVAAAAGVNMNA-MLDAIDGVVPeHTQVHVVSSCKGSLS-SDGLHEISMMGICDARGAYSTHYAPIDMSSASQWSEKFEAGRAAGSAAAKAAwaksgrklEFPDLCMVNSTTGVEEGVLAGI-ADVLGNVPCFGGSAADDGTLDgGGWVGALsnespngsgsfvA----KstddngdGVVVTLMWPSVETRMIFSSCYTGVdSLKGTITKAEGRVIHEIDGK 1460
                  566777777777778.9999999**********999999998.79999999998888777777777777666665555555555555555555556666**************************.99999***********98765145666544567777765551....14445666************************99*****************97 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 0.44
   PF08495.5   19 llealrealpgvpvvGcstageittedegepa 50  
                  +   +++al + p+ +c t ge++t   g+++
  MMETSP1325-20131115|4199_1 1596 VGTNISAALSRKPFLTCFTYGEVGT--VGDTE 1625
                  778899999999*************..87765 PP

>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   7.5e-12     1e-08       2      67 .]     743     810 ..     742     810 .. 0.86

  Alignments for each domain:
  == domain 1    score: 35.1 bits;  conditional E-value: 7.5e-12
  PF00550.20   2 klleivaevlgldpdeidld.tdlfelGlDSllaveliarleeefgv....eipvedlfelptlaelaayl 67 
                 ++++i+ +vl    ++++   ++ f+lG+DSl ++  ++ l+ +fg     +i  ++l+e++t+++laa++
  MMETSP1325-20131115|4199_1 743 EICDIWGTVLS---TPVNNVfANWFDLGGDSLKMIGAMSLLNAKFGSklggAIKSSTLMEHQTVSSLAAHI 810
                 6999******7...556444499**********************65345588888*************98 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.2   1.7e+03     146     225 ..     401     488 ..     378     491 .. 0.64
   2 !   32.4   0.0   5.6e-11   7.6e-08      19     161 ..     859    1045 ..     841    1086 .. 0.65

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 1.2
                 HHHHH--GGGG....GG...........------HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTTEEEEE---SSSS-...-HHHH CS
   PF12697.2 146 alvradaaalaellraa...........lldadlrealarldvPvlviageaDrvvppeearrlaealpgarvvvlpgagHllfleapdev 225
                 ++++   ++ ++l++ a           l+ + + +++++l++ v +++g+   ++ p+++ ++   lp+++v+ + ga     ++ ++++
  MMETSP1325-20131115|4199_1 401 HWLDLMERHQVTLWNTAppvmsmlleyvLHTPGMIDRFRKLKLRVVMLSGDFISLAIPRHLHAM---LPDCEVISMGGATEASIWSCWHRI 488
                 3333322222333333344444444557788888899999999999999887666556666655...799999999998887777777665 PP

  == domain 2    score: 32.4 bits;  conditional E-value: 5.6e-11
                  HHHTTTSEEEEE-----------S...S--HHHHHH....HHHHHHHH--....--EEEE--------HHHHHH----....EEEEEEE------STT.............................................---TTHHHHHHHHHH----....--H..HHHHH-..----HHHHHH--GGGG....G CS
   PF12697.2   19 eaLaagyrvvapDlpGhGrSdrppdydpdtledlaa....dlaalldalgl...rpvvlvGHSlGgavalaaaarrpd...lvrglvlidppgplpas.............................................alrpagpsllrrllagraaalrdlaarafarlfd..gdelealvradaaalaellra 161 
                  ++L  + + +a+  pG  + +      ++t+e++aa     + +ll++l +   + + l G+S+Gg++a ++a +  +    vr++vl+d+p+p+ +                                              a        + + l++ ++al  +++++f+r+++  ++  +al++++  ++ +l+++
  MMETSP1325-20131115|4199_1  859 KLL-PDQPFYALQHPGLEEGEE----VFTTVEEMAAsfvtSIKKLLATLPGgidGNFSLGGWSMGGVIACEVALQLLEqgvAVRSVVLVDSPAPSGETidmsnlsttaelalsyanditayrienllptidelmglsddevevA--------VLESLRHNEPALVTMTRERFGRALQvyAANTRALAAYTPSRTSALFQS 1045
                  444.344566666665544443....46788888883333445566666669999******************99666778************888889999999999999998888888888877777777765544332220........223334555566666666666666333333333333333333333333 PP

>> PF08415.5  Nonribosomal peptide synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   9.4e-08   0.00013       8      49 ..       2      46 ..       1      55 [. 0.89

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 9.4e-08
   PF08415.5  8 eVlRelarr.rggaaalmPVVFTSaLgldgdgl..gaaadllgep 49
                +V+ +l++r +  ++a++P VF S+Lgl+ +g+  +++++++g++
  MMETSP1325-20131115|4199_1  2 DVMQDLNQRdKSPGRAVAPFVFASVLGLERRGGskQNPFNWFGKT 46
                79*******999999***************99999999***9987 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   1.9e-06    0.0026      42     100 ..     905     964 ..     887    1049 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.9e-06
                 TSSS.EEEEE-B---HHHHHHHHHCGG...GEEEEEEESB--HHSHCSHSTTCHCHHHHHHHH CS
  PF00561.15  42 glkk.ltlvGhSmGGmialayaaeypd...rvkamvllgtvavlsdglssdvlnrgstltlla 100
                 g++  + l G+SmGG ia+++a++  +    v+++vl+ ++   + g + d+ n  st   la
  MMETSP1325-20131115|4199_1 905 GIDGnFSLGGWSMGGVIACEVALQLLEqgvAVRSVVLVDSP--APSGETIDMSNL-STTAELA 964
                 566679999**************999999***********8..555555555554.4444444 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   3.3e-06    0.0045      44     102 ..     881     957 ..     847    1014 .. 0.69

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 3.3e-06
   PF12695.2  44 a............aakrvlaadll...dleriilvGhSlGGgvalelag...rd.drvkglvllap.fpdgedlakltl 102
                                k++l a l+   d ++  l+G+S+GG +a+e+a    ++   v+++vl+++  p+ge+++  +l
  MMETSP1325-20131115|4199_1 881 FttveemaasfvtSIKKLL-ATLPggiD-GNFSLGGWSMGGVIACEVALqllEQgVAVRSVVLVDSpAPSGETIDMSNL 957
                 2333333334444455555.66667654.699*****************666234799999999975688887765555 PP

>> PF11187.3  Protein of unknown function (DUF2974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0    0.0001      0.14      75     137 ..     899     960 ..     881     970 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.0001
   PF11187.3  75 lnkileesegkiylgGHSKGGnlAvyaaan.aeddlqeriskiysfDgpGlskevveseeykki 137
                 l+++   ++g++ lgG+S GG +A  +a++ +e+ ++  ++ ++ +D+p  s e+++ ++ +++
  MMETSP1325-20131115|4199_1 899 LATLPGGIDGNFSLGGWSMGGVIACEVALQlLEQGVA--VRSVVLVDSPAPSGETIDMSNLSTT 960
                 33333345669*******************7888888..9*********999888887776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1708 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 2.44u 0.37s 00:00:02.81 Elapsed: 00:00:01.03
# Mc/sec: 3973.76
//
Query:       MMETSP1325-20131115|4204_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-32  113.6   0.1    1.2e-32  113.4   0.1    1.0  1  PF00112.18 Papain family cysteine protease
    0.00068   18.1   0.3    0.00086   17.8   0.2    1.1  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   0.1   1.8e-36   1.2e-32     110     219 ..      13     122 ..       2     123 .. 0.91

  Alignments for each domain:
  == domain 1    score: 113.4 bits;  conditional E-value: 1.8e-36
                 CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCT.TC-EEEEE-SB-TT------EEEESSSS...SGGGTTSSEEEE CS
  PF00112.18 110 vakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygven.gkkyWivkNSWgtdwGekGYiriargkn...necgieseavyp 219
                  ++ +gy++v+e+ eeal++a+a+ +Pvsvai+a++ +fqlY+sGv+++ +c + +l+h+vl+ Gyg+   g++yW vkNSWg++wG++GYi i+rg++   ++cgi ++a+yp
  MMETSP1325-20131115|4204_1  13 GTTPTGYTDVEES-EEALMSAVAQ-QPVSVAIQANQLSFQLYSSGVLTG-RCGT-SLDHGVLAAGYGTYTdGTDYWKVKNSWGDSWGMDGYILIERGNSqtgGQCGILMSASYP 122
                 56778999**997.*********9.************************.9*95.9***********9765**************************889999********997 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2   1.3e-07   0.00086     359     397 ..      65     102 ..      53     106 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.3e-07
  PF03051.10 359 mtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfvm 397
                 ++H ++ +g     ++ +  wkv nsWG+  G +Gy  +
  MMETSP1325-20131115|4204_1  65 LDHGVLAAGYGT-YTDGTDYWKVKNSWGDSWGMDGYILI 102
                 567777777776.6667789****************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.30s 00:00:00.68 Elapsed: 00:00:00.45
# Mc/sec: 660.33
//
Query:       MMETSP1325-20131115|4205_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-09   36.1   0.0      5e-09   35.7   0.0    1.2  1  PF00149.23 Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   3.7e-13     5e-09     136     200 ..       3     102 ..       1     103 [. 0.95

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 3.7e-13
                 HHHHHHHHHCCEEESEEEEEESSSSCHHHCTTTTH.....................................SCCHHHHHHHHHHHHTTSSEEEE-SSSS CS
  PF00149.23 136 qleeflalplralvdgkilltHgplsssggssddi...................................gggelfgpdalekllekygvdlvlrGHeHv 200
                 +l +f   pl+a ++ k++++Hg+l s+++   d+                                   g+g  fgpd+++ +lek++++lv+r+He +
  MMETSP1325-20131115|4205_1   3 FLVVFSHIPLCACIESKVFVVHGGLASTDDVTIDDiqaldrireppesglmcdlmwadpqplpgrspskrGVGLSFGPDVTAAFLEKNDLKLVIRSHEVR 102
                 5667889999******************9999999**************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|4207_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-17   61.4   6.7    0.00021   20.9   0.0    6.9  7  PF13516.1  Leucine Rich repeat
    6.5e-11   41.4   0.7    6.2e-05   22.4   0.0    3.5  4  PF12799.2  Leucine Rich repeats (2 copies)
    6.2e-07   28.9   1.9     0.0021   17.6   0.1    2.7  3  PF13855.1  Leucine rich repeat
    1.3e-05   24.4   9.6        6.2    7.1   0.1    6.2  6  PF00560.28 Leucine Rich Repeat
    0.00047   19.7   7.8        1.9    8.9   0.0    5.9  6  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.12   3.2e+02       8      21 ..      20      34 ..      13      37 .. 0.74
   2 !    6.9   0.2    0.0025       6.8       1      22 [.      39      61 ..      39      64 .. 0.87
   3 ?    1.2   0.0      0.18     5e+02       7      19 ..      71      84 ..      65      88 .. 0.82
   4 !   11.8   0.0   6.6e-05      0.18       1      21 [.      91     112 ..      91     115 .. 0.87
   5 ?    2.3   0.0     0.079   2.2e+02       3      23 ..     119     140 ..     117     141 .. 0.76
   6 !   12.9   0.0   2.9e-05     0.078       5      24 .]     149     169 ..     146     169 .. 0.92
   7 !   20.9   0.0   7.7e-08   0.00021       1      21 [.     171     192 ..     171     193 .] 0.95

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.12
   PF13516.1  8 dLsnNq.igdeGlsa 21
                +L ++  i+d+G+ +
  MMETSP1325-20131115|4207_1 20 NLTGCAeITDKGVHM 34
                7777867****9865 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0025
   PF13516.1  1 lknLtsLdLsnN.qigdeGlsaL 22
                +++L+ L L ++ +i+d  +s+L
  MMETSP1325-20131115|4207_1 39 CTSLQALILDGCtKITDSSMSSL 61
                99*******99736***999887 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.18
   PF13516.1  7 LdLsnNq.igdeGl 19
                L L++++ i+d G+
  MMETSP1325-20131115|4207_1 71 LSLQRCHrITDVGV 84
                78999*88***997 PP

  == domain 4    score: 11.8 bits;  conditional E-value: 6.6e-05
   PF13516.1   1 lknLtsLdLsnNq.igdeGlsa 21 
                 + ++++L+L++++ ++de l+ 
  MMETSP1325-20131115|4207_1  91 CRKIRVLNLNYCKqVTDETLKT 112
                 899*********77****9986 PP

  == domain 5    score: 2.3 bits;  conditional E-value: 0.079
   PF13516.1   3 nLtsLdLsnN.qigdeGlsaLa 23 
                  ++ L+++++ q +d Gl ++a
  MMETSP1325-20131115|4207_1 119 LIELLHVGFCtQMTDAGLYSFA 140
                 567789999846*****97776 PP

  == domain 6    score: 12.9 bits;  conditional E-value: 2.9e-05
   PF13516.1   5 tsLdLsnNq.igdeGlsaLan 24 
                 +sLd+s++  i+d+ ++aLa+
  MMETSP1325-20131115|4207_1 149 KSLDISYCRsISDDSIEALAK 169
                 79******88*********96 PP

  == domain 7    score: 20.9 bits;  conditional E-value: 7.7e-08
   PF13516.1   1 lknLtsLdLsn.NqigdeGlsa 21 
                 ++nL+ L+Ls+ N i+deG+++
  MMETSP1325-20131115|4207_1 171 CTNLEFLNLSGvNRITDEGAKS 192
                 9*********9999******86 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.5   0.0    0.0088        24      23      42 ..      39      61 ..      13      63 .. 0.69
   2 !   10.1   0.0   0.00016      0.43       1      39 [.      40      82 ..      40      88 .. 0.82
   3 !   10.3   0.0   0.00014      0.37       3      37 ..      68     106 ..      66     115 .. 0.78
   4 !   22.4   0.0   2.3e-08   6.2e-05       4      38 ..     149     187 ..     149     190 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.0088
   PF12799.2 23 LpnLktLnLsnN.pisd..lsaL 42
                +++L+ L L+++ +i+d  +s+L
  MMETSP1325-20131115|4207_1 39 CTSLQALILDGCtKITDssMSSL 61
                79999999999878986446766 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00016
   PF12799.2  1 tnLevLdLsn.NnIkdlppe.l.anLpnLktLnLsnNp.isdl 39
                t+L+ L L + ++I+d + + l  n+  L +L+L++++ i+d+
  MMETSP1325-20131115|4207_1 40 TSLQALILDGcTKITDSSMSsLkRNCAGLNLLSLQRCHrITDV 82
                689******9459**9887449558999********9549986 PP

  == domain 3    score: 10.3 bits;  conditional E-value: 0.00014
   PF12799.2   3 LevLdLsnN.nIkdlp..pelanLpnLktLnLsnNp.is 37 
                 L  L+L+++ +I+d++  p l  +++ ++LnL++++ ++
  MMETSP1325-20131115|4207_1  68 LNLLSLQRChRITDVGvvPMLVACRKIRVLNLNYCKqVT 106
                 77799**9966**965224599************96255 PP

  == domain 4    score: 22.4 bits;  conditional E-value: 2.3e-08
   PF12799.2   4 evLdLsnN.nIkd..lppel.anLpnLktLnLsn.Npisd 38 
                 ++Ld+s++ +I+d  +++ l ++++nL+ LnLs+ N+i+d
  MMETSP1325-20131115|4207_1 149 KSLDISYCrSISDdsIEA-LaKKCTNLEFLNLSGvNRITD 187
                 589*****55*9556***.8589***********789998 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.5   6.7e+03       5      14 ..      14      22 ..      13      28 .. 0.66
   2 !   17.6   0.1   7.5e-07    0.0021       1      60 [.      40     103 ..      40     103 .. 0.89
   3 !   10.1   0.0   0.00017      0.48      28      61 .]     149     185 ..     140     185 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 2.5
   PF13855.1  5 eLdLsnNrlk 14
                +L L +N l+
  MMETSP1325-20131115|4207_1 14 RLSLAFN-LT 22
                5667777.54 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 7.5e-07
   PF13855.1   1 pnLkeLdLsnN.rlkvipdgaFk.glsnLkvLdLs.gnnlksispe.afkgLpsLreLnLsgNr 60 
                 ++L+ L+L+++ ++++ + +++k ++  L  L+L+ +++++ +    ++  ++++r LnL +++
  MMETSP1325-20131115|4207_1  40 TSLQALILDGCtKITDSSMSSLKrNCAGLNLLSLQrCHRITDVGVVpMLVACRKIRVLNLNYCK 103
                 589******88799999999999999**************977443389***********9985 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 0.00017
   PF13855.1  28 kvLdLs.gnnlk..sispeafkgLpsLreLnLsg.Nrl 61 
                 k+Ld+s + +++  si++ + k++++L+ LnLsg Nr+
  MMETSP1325-20131115|4207_1 149 KSLDISyCRSISddSIEA-LAKKCTNLEFLNLSGvNRI 185
                 578888777775225544.3589999999999987765 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.52   1.4e+03       6      14 ..      20      29 ..      13      39 .. 0.75
   2 ?    4.4   0.0     0.018        48       1      14 [.      41      55 ..      41      68 .. 0.76
   3 ?    2.6   0.0     0.066   1.8e+02       2      15 ..      68      82 ..      67      89 .. 0.80
   4 !    6.0   0.1    0.0052        14       1      14 [.      93     107 ..      93     139 .. 0.77
   5 ?    4.6   0.0     0.015        42       3      14 ..     149     161 ..     147     169 .. 0.79
   6 !    7.1   0.1    0.0023       6.2       1      13 [.     173     186 ..     173     188 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.52
                EETSS.BCBC CS
  PF00560.28  6 dLsgN.nlts 14
                +L g+  +t+
  MMETSP1325-20131115|4207_1 20 NLTGCaEITD 29
                7888888875 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.018
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                +L+ L L+g+ ++t+
  MMETSP1325-20131115|4207_1 41 SLQALILDGCtKITD 55
                6999*********96 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.066
                ESEEEETSS.BCBCH CS
  PF00560.28  2 LeeLdLsgN.nltsl 15
                L  L+L+++ ++t++
  MMETSP1325-20131115|4207_1 68 LNLLSLQRChRITDV 82
                5679*****999984 PP

  == domain 4    score: 6.0 bits;  conditional E-value: 0.0052
                 TESEEEETSS.BCBC CS
  PF00560.28   1 nLeeLdLsgN.nlts 14 
                 ++++L+L+++ ++t+
  MMETSP1325-20131115|4207_1  93 KIRVLNLNYCkQVTD 107
                 579*******99995 PP

  == domain 5    score: 4.6 bits;  conditional E-value: 0.015
                 SEEEETSS.BCBC CS
  PF00560.28   3 eeLdLsgN.nlts 14 
                 ++Ld+s++ ++++
  MMETSP1325-20131115|4207_1 149 KSLDISYCrSISD 161
                 68******99985 PP

  == domain 6    score: 7.1 bits;  conditional E-value: 0.0023
                 TESEEEETS.SBCB CS
  PF00560.28   1 nLeeLdLsg.Nnlt 13 
                 nLe L+Lsg N++t
  MMETSP1325-20131115|4207_1 173 NLEFLNLSGvNRIT 186
                 8********77988 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.6     7e+03       5      11 ..      14      20 ..      13      29 .. 0.61
   2 ?    2.6   0.0     0.081   2.2e+02       1      14 [.      40      54 ..      40      61 .. 0.85
   3 ?    0.5   0.1      0.41   1.1e+03       5      15 ..      70      81 ..      67      83 .. 0.78
   4 ?    3.3   0.0     0.049   1.3e+02       4      14 ..      95     106 ..      92     112 .. 0.80
   5 ?    3.0   0.0     0.064   1.7e+02       4      13 ..     149     159 ..     146     165 .. 0.84
   6 !    8.9   0.0   0.00068       1.9       1      14 [.     172     186 ..     172     188 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 2.6
   PF13504.1  5 eLdLsgn 11
                +L+L+ n
  MMETSP1325-20131115|4207_1 14 RLSLAFN 20
                6777655 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.081
   PF13504.1  1 pnLkeLdLsgnr.Lt 14
                ++L+ L L g+  +t
  MMETSP1325-20131115|4207_1 40 TSLQALILDGCTkIT 54
                68********96677 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.41
   PF13504.1  5 eLdLsgnr.Lts 15
                 L+L +++ +t+
  MMETSP1325-20131115|4207_1 70 LLSLQRCHrITD 81
                589999988987 PP

  == domain 4    score: 3.3 bits;  conditional E-value: 0.049
   PF13504.1   4 keLdLsgnr.Lt 14 
                 ++L+L++++  t
  MMETSP1325-20131115|4207_1  95 RVLNLNYCKqVT 106
                 89******8555 PP

  == domain 5    score: 3.0 bits;  conditional E-value: 0.064
   PF13504.1   4 keLdLsgnr.L 13 
                 k Ld+s++r +
  MMETSP1325-20131115|4207_1 149 KSLDISYCRsI 159
                 78******855 PP

  == domain 6    score: 8.9 bits;  conditional E-value: 0.00068
   PF13504.1   1 pnLkeLdLsg.nrLt 14 
                 +nL++L+Lsg nr+t
  MMETSP1325-20131115|4207_1 172 TNLEFLNLSGvNRIT 186
                 79********99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 924.99
//
Query:       MMETSP1325-20131115|4206_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.0   0.3       0.69    9.8   0.0    2.5  2  PF13405.1  EF-hand domain
      0.031   13.7   2.1       0.29   10.6   1.4    2.1  1  PF13833.1  EF-hand domain pair
       0.13   12.3   0.6       0.27   11.3   0.4    1.5  1  PF13499.1  EF-hand domain pair
       0.13   11.5   1.0       0.57    9.5   0.5    2.1  2  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.04   1.4e+02      13      28 ..     145     160 ..     136     168 .. 0.77
   2 ?    9.8   0.0    0.0002      0.69       2      26 ..     190     214 ..     189     221 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.04
                 ----B---HHHHHHH. CS
   PF13405.1  13 gdGkidaeELrdaLrk 28 
                 + G i++ EL++aL++
  MMETSP1325-20131115|4206_1 145 RGGNITRIELMRALKT 160
                 6689**********96 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0002
                 HH---GCC-------B---HHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaL 26 
                 ++++F+++D+  +  i+ e ++d+ 
  MMETSP1325-20131115|4206_1 190 FERVFEMMDTEDNQSISVENFLDFA 214
                 789*****************99986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.4   8.4e-05      0.29       2      52 ..     146     215 ..     145     217 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 8.4e-05
   PF13833.1   2 kGlItreeLkralallglkg.....................lseee.vdilfrefDtdgdGkisfeEFcvlle 52 
                 +G Itr eL+ral   ++++                     +++ e ++ +f ++Dt+++  is e F+++ +
  MMETSP1325-20131115|4206_1 146 GGNITRIELMRAL---KTDRdlatvlqiprvhnyyadneeaTEAREtFERVFEMMDTEDNQSISVENFLDFAT 215
                 699********99...4444557799999999999999999999999*******************9998865 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   7.8e-05      0.27      34      65 ..     166     213 ..     138     214 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 7.8e-05
   PF13499.1  34 s................deevrevldyifkelDkngdGvlsfeEflqa 65 
                 +                  e re  +++f+++D+  +  +s e fl +
  MMETSP1325-20131115|4206_1 166 TvlqiprvhnyyadneeATEARETFERVFEMMDTEDNQSISVENFLDF 213
                 366666666666666664455556677799999998889999988875 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.37   1.3e+03      15      28 ..     147     160 ..     147     161 .. 0.84
   2 ?    9.5   0.5   0.00017      0.57       2      26 ..     190     214 ..     189     216 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.37
                 SEBEHHHHHHHHHH CS
  PF00036.27  15 GkIsfeEfkealkk 28 
                 G I+  E+++alk+
  MMETSP1325-20131115|4206_1 147 GNITRIELMRALKT 160
                 778999***99985 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00017
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 ++++F+++D+  +  Is+e f+++ 
  MMETSP1325-20131115|4206_1 190 FERVFEMMDTEDNQSISVENFLDFA 214
                 789******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       557  (0.0407402); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1268.07
//
Query:       MMETSP1325-20131115|4208_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0035   16.6   0.0     0.0043   16.3   0.0    1.2  1  PF00685.22 Sulfotransferase domain


Domain annotation for each model (and alignments):
>> PF00685.22  Sulfotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   3.1e-07    0.0043     169     200 ..      49      85 ..      20     119 .. 0.79

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 3.1e-07
                 CEEEEEHHHHHH-HHHHHHHHHHHTT--.....HHHH CS
  PF00685.22 169 nvlflrYEdlkkdpakeikeiaeFlGip.....leki 200
                 ++++l+YEdl++++a++++ +++F G +      e+i
  MMETSP1325-20131115|4208_1  49 KLHVLKYEDLQRNTASSLQGMLRFVGESqladdSERI 85 
                 6899**********************99875553333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1018.45
//
Query:       MMETSP1325-20131115|4209_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-58  197.4   2.1      3e-58  197.2   1.4    1.0  1  PF00478.20 IMP dehydrogenase / GMP reductase domain
    3.5e-05   23.0   0.2    4.7e-05   22.5   0.2    1.2  1  PF03060.10 Nitronate monooxygenase
    0.00011   21.2   0.2    0.00017   20.6   0.2    1.3  1  PF05690.9  Thiazole biosynthesis protein ThiG
     0.0057   15.4   1.4      0.008   14.9   0.9    1.2  1  PF01070.13 FMN-dependent dehydrogenase
  ------ inclusion threshold ------
      0.057   12.2   0.3      0.076   11.8   0.2    1.1  1  PF04481.7  Protein of unknown function (DUF561)
      0.069   12.0   1.2       0.14   11.0   0.8    1.5  1  PF01180.16 Dihydroorotate dehydrogenase
      0.094   11.8   2.0      0.086   11.9   0.4    1.7  2  PF00977.16 Histidine biosynthesis protein


Domain annotation for each model (and alignments):
>> PF00478.20  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.2   1.4   1.6e-61     3e-58     164     350 ..       2     191 ..       1     192 [. 0.92

  Alignments for each domain:
  == domain 1    score: 197.2 bits;  conditional E-value: 1.6e-61
                 HHHHH----SEEE------GCCHHHHC-----HHHHHHHHHHHHTTCC-EEEE-----SHHHHHHHHH----EEEE--TTTTSTTSSS-EEE----EEEEE-----TTTH--.TTGGGG-----S-SS-----EEEE----HHHHHHHHHHHHHHHHHH----BHHHHHHHH......EEEEBCHHHHCTTS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxx RF
  PF00478.20 164 eeLieagadavkvGiGpGsiCtTrevagvGvpqltAvlevaeaakklgvpviaDGGirnsgdiakAlaaGAsavMlGsllAgteespgelilkngkklkeyrGmgSleAmekkgskdryfqeeekklvaegvegavpykGsvkkvieqllgglrssmgyvGakslkelreka......kfvrvtsaglkesgv 350
                 ++L++agad+++vG+G Gs+ t + v +vG++ql+Av+++a++a+ ++vp+iaDGGi n+g   kAl +GAs+vM+GsllAg eespg+++++n+ +lk+yrGmgSl+  +k  ++d   + ee+  v++gv+gav +kG++ k+++++++ +r++++++G++sl +lr+        +++r  +a+  e+gv
  MMETSP1325-20131115|4209_1   2 RKLLDAGADGLRVGMGVGSVSTSQNVKAVGRAQLSAVYHCAKIASLYNVPCIADGGIGNTGSAIKALTMGASCVMMGSLLAGVEESPGQYFFENNMRLKAYRGMGSLHNRSK-VNSDAA-SPEEDIVVNTGVSGAVVDKGTMMKFMPYFAQSVRHGLQDMGINSLPSLRQGLydgslrFEIRSPNAQK-EGGV 191
                 689*******************************************************************************************************998666.555555.44579********************************************9877777766777777766.6665 PP

>> PF03060.10  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.2   2.4e-08   4.7e-05     178     229 ..      37      88 ..       1     104 [. 0.79

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.4e-08
  PF03060.10 178 llllvetvkdavdiPviAAGGiadgrgiaaaLalGaeGVqiGTrfLatkeat 229
                  +    ++++  ++P iA GGi++  +   aL++Ga+ V +G+ +  ++e++
  MMETSP1325-20131115|4209_1  37 AVYHCAKIASLYNVPCIADGGIGNTGSAIKALTMGASCVMMGSLLAGVEESP 88 
                 4445567888888**************999***************9999997 PP

>> PF05690.9  Thiazole biosynthesis protein ThiG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.2   8.5e-08   0.00017     165     211 ..      39      85 ..       2      91 .. 0.84

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 8.5e-08
                 HHHHHHHHH-SS-BEEE-----HHHHHHHHH----EEE-SCCCHTSS CS
   PF05690.9 165 enlkiiieeakvPvivDAGigtpsdaaqamelGadavllntavaeak 211
                 +    i +  +vP i D Gig++  a +a+ +Ga+ v++ + +a  +
  MMETSP1325-20131115|4209_1  39 YHCAKIASLYNVPCIADGGIGNTGSAIKALTMGASCVMMGSLLAGVE 85 
                 45556777789****************************99888765 PP

>> PF01070.13  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.9   4.1e-06     0.008     273     309 ..      44      78 ..       3      84 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 4.1e-06
                 HHHHHT.SS--EE--------HHHHHHH----EEEE- CS
  PF01070.13 273 ivaavgdklevlvDgGirrGsDvlkalAlGAdavlvG 309
                 i+     +++ ++DgGi +    +kal +GA++v++G
  MMETSP1325-20131115|4209_1  44 IAS--LYNVPCIADGGIGNTGSAIKALTMGASCVMMG 78 
                 222..24599**************************9 PP

>> PF04481.7  Protein of unknown function (DUF561)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   3.9e-05     0.076     141     218 ..       4      82 ..       1      89 [. 0.80

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.9e-05
   PF04481.7 141 LeslgvdliqteGkitsiskakkvndliekslstlastyeiskkvslPvicasGlsdvtvpl.alslgasGiGigsavs 218
                 L ++g+d ++   ++ s+s +++v+ + +  ls++    +i++  ++P i+  G+ +  + + al++gas + +gs + 
  MMETSP1325-20131115|4209_1   4 LLDAGADGLRVGMGVGSVSTSQNVKAVGRAQLSAVYHCAKIASLYNVPCIADGGIGNTGSAIkALTMGASCVMMGSLLA 82 
                 566666666666667788888888888888888888888899999**********999877769********9999765 PP

>> PF01180.16  Dihydroorotate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.8     7e-05      0.14     236     274 ..      45      81 ..      14      87 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 7e-05
                 HHHTTTTSEEEE--------HHHHHHH----SEEESHHH CS
  PF01180.16 236 ykrlkkeipiIgvGGiesgeDalekieaGAslvqvytal 274
                 ++    ++p I+ GGi +   a+  ++ GAs v +++ l
  MMETSP1325-20131115|4209_1  45 ASLY--NVPCIADGGIGNTGSAIKALTMGASCVMMGSLL 81 
                 3333..59**************************99976 PP

>> PF00977.16  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.4   4.4e-05     0.086     168     222 ..      27      81 ..      14      85 .. 0.80
   2 ?   -3.0   0.0       1.7   3.2e+03      79      89 ..     238     248 ..     235     258 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.4e-05
                 TTC--------HHHHHHHHHHHSSEEEEE----SHHHHHHHHC----EEEESHCC CS
  PF00977.16 168 idrdGtlsGpdlellkklaeavkipviasGGvgsledlkelksegvdavlvgsal 222
                 ++++G  +   +    k+a+ +++p ia GG+g+     ++ ++g++ v++gs+l
  MMETSP1325-20131115|4209_1  27 VKAVGRAQLSAVYHCAKIASLYNVPCIADGGIGNTGSAIKALTMGASCVMMGSLL 81 
                 5566666666667778888889999999999999999999999999999998876 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 1.7
                 E----SHHHHH CS
  PF00977.16  79 GgGIrsledve 89 
                 GgG+r+++  +
  MMETSP1325-20131115|4209_1 238 GGGVRQMDGEQ 248
                 88888887555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.58u 0.36s 00:00:00.94 Elapsed: 00:00:00.66
# Mc/sec: 969.44
//
Query:       MMETSP1325-20131115|4211_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 385.13
//
Query:       MMETSP1325-20131115|4214_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 412.17
//
Query:       MMETSP1325-20131115|4210_1  [L=281]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-44  151.8   0.0    4.5e-44  150.0   0.0    1.7  1  PF01088.16 Ubiquitin carboxyl-terminal hydrolase, family 1


Domain annotation for each model (and alignments):
>> PF01088.16  Ubiquitin carboxyl-terminal hydrolase, family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.0   0.0   3.3e-48   4.5e-44       1     210 [.      23     260 ..      23     265 .. 0.90

  Alignments for each domain:
  == domain 1    score: 150.0 bits;  conditional E-value: 3.3e-48
                 --------HHHHHHHHHH---.-SEEEEEE----C.CCHTTS-SSEEEEEEEEE--HHHHHHHHHHHHHH.....................-------TTS-----..-STTG---HHHHHHHHT..TTTTS---TTSHHHHHHHHCTTS-CCCHHHCCCT-HHHHHHHCCHHH.---SSTH..HHCT--EEEEEEEE----EEEE----S......S-EEEE---STTHHHHHHHHHHHC CS
  PF01088.16   1 swlplEsdpevftelleklGv.kgvqfedvysldeeellamlprpvyalillFklteeleekreeedeelk....................ekekeesekvfFakQ..tiqNACgtiAlLhallN..nkdkeeieegseLkkfleetkalspeergkalenseeireahnsfaregqteakeekkeeevalHFiafvkvdgklyELDGlke......gPiehgelsdedlledaaevikkr 210
                 +wlplEs+p+v++ +++klG+  ++ f dv++lde ell m+p+p+ a+ llF++ + ++++ +e +++++                          ++++f+ +Q   i+NACgtiA +ha++N   +d+ +++e   L  f+++t ++++++rg+ l+ + e++ +  ++a+ g+t+     +++ ++ HF+afv++ g lyELDG  +      +P+  g+++ +++l daa+vi++ 
  MMETSP1325-20131115|4210_1  23 GWLPLESNPDVLNPFVHKLGLpPNWGFADVWGLDE-ELLMMVPQPCVAVCLLFPCANIHHKRVAELRARIEggkcwdpdkaaageaqevpaPVLPTPPDGLFYCQQhdGIGNACGTIASIHAVANavADDTFALDEAAALGMFVANTYTMDADARGRELQMTRELQVLSDATAAAGETDGAG--THNADDGHFVAFVRKGGVLYELDGTITtedglgFPVAWGATTADSFLADAARVIRES 260
                 6*********************99**********9.88******************88888888888888889999999999998877776334567999******666****************98888899*********************************************9877..57999*******************8643344558********************964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.62
# Mc/sec: 1086.09
//
Query:       MMETSP1325-20131115|4215_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 929.62
//
Query:       MMETSP1325-20131115|4212_1  [L=451]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-10   40.3   0.0    5.4e-10   39.5   0.0    1.4  1  PF04055.16 Radical SAM superfamily


Domain annotation for each model (and alignments):
>> PF04055.16  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   3.9e-14   5.4e-10       5     165 ..     164     324 ..     160     325 .. 0.86

  Alignments for each domain:
  == domain 1    score: 39.5 bits;  conditional E-value: 3.9e-14
                 CEESS--TT-CCCTCHHHHHHHHHHHHHHHHHHHHHHTCS-CEEEEE---SGGGTTTHHHHHHHHHHCH....EECCEEEEEE-SSCH.HHHHHHHHHTT-SEEEEEEESSSHHHHHHCCT.CTS-HHHHHHHHHHHHHHSSET..EEEEEEEECTTTCHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxx RF
  PF04055.16   5 rgCnlrCsfCanpetsregrgrsrsveeileevkelkeekgvkevtltGgepllypdfvellerlakla....lpgirialetngtlpdeeileelaelgvdrvslglesgdeekvlklmr.rghtfeevlealeklreagikr..vvdfivglpgetdeeleellel 165
                   C+++C+fCa++++s+++ +    + + ++ v e     gv +v+lt+ + ++ pd     ++l  +     +p+ir+    + +  de  +e+la   +d++++++e++ +  ++  +r ++  + + l al ++++a  +   +++ ++++ ge+d+e++e +++
  MMETSP1325-20131115|4212_1 164 DTCTRGCRFCAVKTSSTPPPPDAFEPFSTAKAVSEW----GVSYVVLTSVDRDDLPDGGAAHFALTVEMikrtTPDIRVECLVSDFQGDEASIEALATSPLDVYAHNVETVER--LTPFVRdKRAGYVQSLLALAAAKKA-RPSlyTKTSLMLGLGESDDEVREAIRD 324
                 67***********87666666666666666666555....5**************9999999999999999999***************************************..5666655777788888888888888.6779******************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.44s 00:00:01.12 Elapsed: 00:00:00.74
# Mc/sec: 1460.48
//
Query:       MMETSP1325-20131115|4216_1  [L=345]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.35s 00:00:00.98 Elapsed: 00:00:00.62
# Mc/sec: 1333.46
//
Query:       MMETSP1325-20131115|4217_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       733  (0.0536132); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 962.75
//
Query:       MMETSP1325-20131115|4218_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 945.47
//
Query:       MMETSP1325-20131115|4219_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-05   23.0   0.0    5.5e-05   22.8   0.0    1.2  1  PF12695.2  Alpha/beta hydrolase family
      0.001   18.2   0.0     0.0015   17.6   0.0    1.2  1  PF00326.16 Prolyl oligopeptidase family
     0.0058   16.4   0.0     0.0069   16.1   0.0    1.2  1  PF12697.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.015   14.6   0.0       0.02   14.2   0.0    1.2  1  PF02230.11 Phospholipase/Carboxylesterase
      0.078   12.0   0.0       0.13   11.4   0.0    1.3  1  PF10503.4  Esterase PHB depolymerase


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0     2e-08   5.5e-05     102     142 .]     124     175 ..      50     175 .. 0.77

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 2e-08
   PF12695.2 102 l......pvllihGtrDgvvppeeaeklakalp.....gdaelvviegasHf 142
                 +      pv ++hG +D+v+ p++a kl+kal+     +d +l ++ ga+H+
  MMETSP1325-20131115|4219_1 124 VekmqglPVTIVHGRCDHVCQPHAAYKLYKALNpkgdrADIRLEIVSGAGHS 175
                 0334445**************************8877777799********6 PP

>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   5.7e-07    0.0015     139     188 ..     122     175 ..     116     192 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 5.7e-07
                 G---..----EEEEEETT-SSS-THHHHHHHHHHH..--S..EEEEEES----- CS
  PF00326.16 139 dnvk..aypplllihGeeDdrvppaealklvaaLqkagkn..vlllifpdegHg 188
                 dnv+  +  p+ ++hG  D  ++p  a+kl++aL+ +g+   ++l i  ++gH+
  MMETSP1325-20131115|4219_1 122 DNVEkmQGLPVTIVHGRCDHVCQPHAAYKLYKALNPKGDRadIRLEIVSGAGHS 175
                 555556778999***********************5555537999999*****5 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.5e-06    0.0069     162     216 ..      78     175 ..      10     178 .. 0.64

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.5e-06
                 G....................................------HHHHTT-.-S-EEEEE-----HHHHHHHHHHHHHSTTE......EEEE---SSSS CS
   PF12697.2 162 a....................................lldadlrealarl.dvPvlviageaDrvvppeearrlaealpga......rvvvlpgagHl 216
                                                      l + +l ++++++ ++Pv++++g+ D+v+ p++a +l +al  +      r+++++gagH+
  MMETSP1325-20131115|4219_1  78 IsktfpdptklnhtletpsilipfalfechymlnngfLRRGELLDNVEKMqGLPVTIVHGRCDHVCQPHAAYKLYKALNPKgdradiRLEIVSGAGHS 175
                 23333333444444444456666666666666555554445555666666679**************888877777764423444559*********6 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   7.4e-06      0.02     144     201 ..     118     177 ..      92     183 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 7.4e-06
  PF02230.11 144 qkleqsatkvakipilqlHgeeDevvplalgkaakellktlln..kvelksyeglgHsil 201
                  +l ++  k++ +p+  +Hg +D v + + +++++++l  ++   +  l+++ g gHs +
  MMETSP1325-20131115|4219_1 118 GELLDNVEKMQGLPVTIVHGRCDHVCQPHAAYKLYKALNPKGDraDIRLEIVSGAGHSDS 177
                 556677888899****************************99988888999999999865 PP

>> PF10503.4  Esterase PHB depolymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.6e-05      0.13     166     205 ..     126     165 ..     118     178 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.6e-05
   PF10503.4 166 aypglpalvvqGdadtvvavknaeslvvalrrlsGladar 205
                  + glp  +v+G +d+v +++ a +l  al     +ad r
  MMETSP1325-20131115|4219_1 126 KMQGLPVTIVHGRCDHVCQPHAAYKLYKALNPKGDRADIR 165
                 4689**********************99999888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|4220_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-07   28.8   1.1    4.1e-07   28.7   0.0    1.5  1  PF05783.6 Dynein light intermediate chain (DLIC)


Domain annotation for each model (and alignments):
>> PF05783.6  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0     3e-11   4.1e-07      92     154 ..      72     133 ..      65     149 .. 0.90

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 3e-11
   PF05783.6  92 ltrlnvwildGdlyhkgllkfaleaeslkdtlvilvvdlsrPWtileslqkWasvlrehidkl 154
                  tr++vw l  d    ++l   l+ +slk +  ++++d+s+PW+i   l++W+ v+++h + l
  MMETSP1325-20131115|4220_1  72 ATRVSVWSLS-DAEFAEMLTPVLKPDSLKAAAFVVMLDMSKPWSIPAALERWSAVIEKHAAGL 133
                 79******95.899999******************************************8776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 705.08
//
Query:       MMETSP1325-20131115|4213_1  [L=913]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-28   96.2  17.6    8.1e-06   25.2   0.0    8.3  8  PF07719.12 Tetratricopeptide repeat
    1.8e-26   91.4  13.8    1.6e-07   30.7   0.2    5.1  4  PF13414.1  TPR repeat
    2.6e-20   72.0  12.9    6.2e-05   22.7   0.1    5.9  5  PF13424.1  Tetratricopeptide repeat
      3e-20   70.7  10.0     0.0065   15.9   0.0    7.5  7  PF00515.23 Tetratricopeptide repeat
    1.7e-18   64.7   0.9     0.0019   17.7   0.0    6.8  6  PF13181.1  Tetratricopeptide repeat
    6.3e-18   63.5  19.5      0.057   13.9   0.1   10.0  8  PF13428.1  Tetratricopeptide repeat
    8.5e-16   58.0  38.8    5.3e-05   23.6   0.3    7.9  5  PF13432.1  Tetratricopeptide repeat
    1.4e-13   50.6   1.5    0.00014   21.8   0.0    4.4  4  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    2.4e-13   49.4  11.8      0.014   15.6   0.0    8.1  6  PF13174.1  Tetratricopeptide repeat
    6.6e-13   47.2   6.1      0.014   15.0   0.1    7.2  7  PF13176.1  Tetratricopeptide repeat
    5.7e-12   45.0  13.1      0.068   12.9   0.3    8.0  7  PF13374.1  Tetratricopeptide repeat
    9.3e-10   38.8  18.4    2.4e-08   34.2   9.1    3.9  2  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
      8e-08   31.7   6.1        3.7    7.8   0.0    7.5  7  PF13431.1  Tetratricopeptide repeat
    2.2e-07   30.5  14.2       0.22   11.2   0.4    7.0  5  PF13371.1  Tetratricopeptide repeat
    2.4e-05   23.5   2.8       0.32   10.0   0.0    4.1  4  PF04733.9  Coatomer epsilon subunit
      0.001   17.6   0.1     0.0083   14.6   0.0    2.2  3  PF10300.4  Protein of unknown function (DUF3808)
     0.0012   18.5   1.4       0.72    9.6   0.1    3.9  4  PF04212.13 MIT (microtubule interacting and transport) domain
  ------ inclusion threshold ------
       0.23   10.8   2.6         35    3.8   0.0    4.0  4  PF12854.2  PPR repeat
       0.53   10.7  19.7        4.5    7.8   0.1    7.6  7  PF07721.9  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   1.7e-05     0.012       2      32 ..      42      72 ..      41      74 .. 0.91
   2 !   13.3   0.1   7.5e-05     0.054      13      33 ..      97     117 ..      96     117 .. 0.93
   3 !   11.0   0.0   0.00041       0.3       2      34 .]     121     153 ..     120     153 .. 0.94
   4 !   11.4   0.0    0.0003      0.21       3      29 ..     156     182 ..     154     184 .. 0.93
   5 !   17.8   0.0   2.7e-06    0.0019       5      34 .]     191     220 ..     188     220 .. 0.95
   6 !    8.1   0.0    0.0033       2.4       8      34 .]     235     261 ..     228     261 .. 0.87
   7 !   25.2   0.0   1.1e-08   8.1e-06       4      34 .]     264     294 ..     262     294 .. 0.96
   8 ?   -2.7   0.2        10   7.2e+03      10      25 ..     671     686 ..     670     688 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.7e-05
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldP 32
                 +l n Gl++ +lg+ e+A++ +e+Al+l  
  MMETSP1325-20131115|4213_1 42 TILANKGLCLDQLGRAEDAVAVLEEALALKE 72
                57899***********************976 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 7.5e-05
                 HTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  13 klgdyeeAleafekAleldPn 33 
                 ++g+yeeA+++f +++e dP+
  MMETSP1325-20131115|4213_1  97 ERGQYEEAADLFTECIEKDPE 117
                 68*****************96 PP

  == domain 3    score: 11.0 bits;  conditional E-value: 0.00041
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                  +l+n +l   +lg++eeA ++fe + + dP n
  MMETSP1325-20131115|4213_1 121 FWLFNKALMIHRLGRLEEATALFEDVYRSDPSN 153
                 589*************************99986 PP

  == domain 4    score: 11.4 bits;  conditional E-value: 0.0003
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAle 29 
                 ++ +lG+ + kl++++eA   +e Al+
  MMETSP1325-20131115|4213_1 156 VYSLLGNNLCKLKRWAEASPVLEAALA 182
                 7999*********************97 PP

  == domain 5    score: 17.8 bits;  conditional E-value: 2.7e-06
                 HHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAleldPnn 34 
                 yn + ++++ ++  eA++afek+le dP++
  MMETSP1325-20131115|4213_1 191 YNYAVCLLNTDKRPEAKDAFEKVLEEDPDY 220
                 99**************************85 PP

  == domain 6    score: 8.1 bits;  conditional E-value: 0.0033
                 HHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   8 GlayyklgdyeeAleafekAleldPnn 34 
                 G  + ++gd++ A+ ++e+A+  +P++
  MMETSP1325-20131115|4213_1 235 GSELCQKGDFAAAIPLLEQAIGRNPKD 261
                 566889***************999986 PP

  == domain 7    score: 25.2 bits;  conditional E-value: 1.1e-08
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                 lynlG a ++ ++y eA+e+f k+le  P++
  MMETSP1325-20131115|4213_1 264 LYNLGAAMMREKHYHEAKECFAKVLEMTPDH 294
                 9****************************97 PP

  == domain 8    score: -2.7 bits;  conditional E-value: 10
                 HHHHTT-HHHHHHHHH CS
  PF07719.12  10 ayyklgdyeeAleafe 25 
                 a+++ gd ++A++   
  MMETSP1325-20131115|4213_1 671 AAMADGDDKKAAKKAL 686
                 6778888888887654 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.4   1.1e-06   0.00078       7      67 ..       7      70 ..       5      72 .. 0.88
   2 !   22.5   0.0   8.2e-08   5.9e-05       7      69 .]      89     151 ..      84     151 .. 0.87
   3 !   25.3   0.4   1.1e-08   7.6e-06       3      69 .]     154     218 ..     152     218 .. 0.92
   4 !   30.7   0.2   2.3e-10   1.6e-07       8      69 .]     233     292 ..     226     293 .. 0.89

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1.1e-06
   PF13414.1  7 kelGnalfkegdydeAieayekAlel....dpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                + ++ +l++ gd  +A+++++k l+     + + a +++n +l++ +lg + e+A++ +e+Al+l
  MMETSP1325-20131115|4213_1  7 NDKATKLLNDGDAIGALALLDKILASpdmtEQQKATILANKGLCLDQLG-RAEDAVAVLEEALAL 70
                678999******************974444677899*************.58***********98 PP

  == domain 2    score: 22.5 bits;  conditional E-value: 8.2e-08
   PF13414.1   7 kelGnalfkegdydeAieayekAleldpnnaely.ynlAlaylklgkdyeeAledyekAleldP 69 
                   ++ +  ++g+y+eA +++++++e dp+  + + +n Al   +lg + eeA + +e + + dP
  MMETSP1325-20131115|4213_1  89 TDKAVRTAERGQYEEAADLFTECIEKDPEGQNFWlFNKALMIHRLG-RLEEATALFEDVYRSDP 151
                 567778889********************999665***********.58***999988777766 PP

  == domain 3    score: 25.3 bits;  conditional E-value: 1.1e-08
   PF13414.1   3 AealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                  +++  lGn+l k+++++eA   +e Al+    + +  yn A ++l+  +++ eA +++ek+le dP
  MMETSP1325-20131115|4213_1 154 TQVYSLLGNNLCKLKRWAEASPVLEAALAEG-ADLNTRYNYAVCLLNT-DKRPEAKDAFEKVLEEDP 218
                 578999**********************976.4899***********8.6789***********998 PP

  == domain 4    score: 30.7 bits;  conditional E-value: 2.3e-10
   PF13414.1   8 elGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                 + G +l ++gd++ Ai ++e+A+  +p+    +ynl++a ++  k+y+eA e++ k+le  P
  MMETSP1325-20131115|4213_1 233 RFGSELCQKGDFAAAIPLLEQAIGRNPK-DTTLYNLGAAMMRE-KHYHEAKECFAKVLEMTP 292
                 67999**********************6.567889*******6.6*************9866 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.5   1.9e-07   0.00014      14      77 ..      12      72 ..       7      73 .. 0.82
   2 ?    4.0   0.0     0.057        41      49      74 ..      88     113 ..      79     117 .. 0.67
   3 ?    6.3   0.0     0.011       8.1       8      31 ..     123     146 ..     115     149 .. 0.77
   4 !   22.7   0.1   8.6e-08   6.2e-05       5      74 ..     154     215 ..     150     217 .. 0.91
   5 !   20.9   0.0     3e-07   0.00022       9      76 ..     232     291 ..     223     293 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.9e-07
   PF13424.1 14 vlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77
                 l+  gd   Al+l+ k l+       +  + a++l n + ++ +lg+ ++A++ le+Al++ e
  MMETSP1325-20131115|4213_1 12 KLLNDGDAIGALALLDKILASPDM---TEQQKATILANKGLCLDQLGRAEDAVAVLEEALALKE 72
                566678888899999999988433...45689*****************************976 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.057
   PF13424.1  49 lnnlanlylalgdydeAleylekAle 74 
                 l++ a   +++g+y+eA +++ +++e
  MMETSP1325-20131115|4213_1  88 LTDKAVRTAERGQYEEAADLFTECIE 113
                 44555555677777777777777665 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.011
   PF13424.1   8 lnnlalvlrrlgdydeAlelyeka 31 
                 l+n al+ +rlg+++eA +l+e +
  MMETSP1325-20131115|4213_1 123 LFNKALMIHRLGRLEEATALFEDV 146
                 678888888888888888888754 PP

  == domain 4    score: 22.7 bits;  conditional E-value: 8.6e-08
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                  ++++ l+++l++l+++ eA   +e al+         +d +++ +n+a ++l   +  eA++ +ek+le
  MMETSP1325-20131115|4213_1 154 TQVYSLLGNNLCKLKRWAEASPVLEAALAE-------GAD-LNTRYNYAVCLLNTDKRPEAKDAFEKVLE 215
                 5799************************54.......467.8**************************97 PP

  == domain 5    score: 20.9 bits;  conditional E-value: 3e-07
   PF13424.1   9 nnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                  + +  l+++gd+  A+ l+e+a+      g+++ d  ++l+nl+ + ++ + y eA+e++ k+le+ 
  MMETSP1325-20131115|4213_1 232 ARFGSELCQKGDFAAAIPLLEQAI------GRNPKD--TTLYNLGAAMMREKHYHEAKECFAKVLEMT 291
                 466777899**************7......999999..69*************************985 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0     1e-05    0.0075       2      33 ..      42      73 ..      41      74 .. 0.92
   2 !   11.0   0.1    0.0003      0.22      14      33 ..      98     117 ..      96     117 .. 0.93
   3 ?    2.7   0.0      0.13        92       4      33 ..     123     152 ..     122     153 .. 0.82
   4 ?    2.9   0.0      0.11        80       3      28 ..     156     181 ..     154     183 .. 0.87
   5 !   12.4   0.1   0.00011     0.079       5      34 .]     191     220 ..     188     220 .. 0.90
   6 !    9.5   0.0   0.00092      0.66      10      34 .]     237     261 ..     235     261 .. 0.89
   7 !   15.9   0.0     9e-06    0.0065       3      34 .]     263     294 ..     262     294 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1e-05
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALelnPn 33
                 +l n+G+++ +lg+ ++A++  e+AL l ++
  MMETSP1325-20131115|4213_1 42 TILANKGLCLDQLGRAEDAVAVLEEALALKED 73
                5789************************9876 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.0003
                 TT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  14 lgkydeAleyyekALelnPn 33 
                  g+y+eA + + +++e +P+
  MMETSP1325-20131115|4213_1  98 RGQYEEAADLFTECIEKDPE 117
                 79****************95 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.13
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23   4 lynlGnaylklgkydeAleyyekALelnPn 33 
                 l+n++++ ++lg+++eA + +e + + +P+
  MMETSP1325-20131115|4213_1 123 LFNKALMIHRLGRLEEATALFEDVYRSDPS 152
                 6788888899*******9999977666666 PP

  == domain 4    score: 2.9 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekAL 28 
                 ++  lGn + kl+++ eA    e AL
  MMETSP1325-20131115|4213_1 156 VYSLLGNNLCKLKRWAEASPVLEAAL 181
                 7999**************88777777 PP

  == domain 5    score: 12.4 bits;  conditional E-value: 0.00011
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALelnPnn 34 
                 yn ++++l+  k  eA +++ek+Le +P++
  MMETSP1325-20131115|4213_1 191 YNYAVCLLNTDKRPEAKDAFEKVLEEDPDY 220
                 55589999999*****************97 PP

  == domain 6    score: 9.5 bits;  conditional E-value: 0.00092
                 HHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  10 aylklgkydeAleyyekALelnPnn 34 
                  + ++g++  A+   e+A+  nP++
  MMETSP1325-20131115|4213_1 237 ELCQKGDFAAAIPLLEQAIGRNPKD 261
                 56799******************86 PP

  == domain 7    score: 15.9 bits;  conditional E-value: 9e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekALelnPnn 34 
                 +lynlG+a ++ + y eA e++ k+Le  P++
  MMETSP1325-20131115|4213_1 263 TLYNLGAAMMREKHYHEAKECFAKVLEMTPDH 294
                 69*************************98875 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.6e-06    0.0019       3      33 ..      43      73 ..      41      74 .. 0.92
   2 ?    3.8   0.0     0.073        52      14      32 ..      98     116 ..      96     119 .. 0.90
   3 ?    3.3   0.0       0.1        75      12      33 ..     131     153 ..     123     154 .. 0.81
   4 !   11.3   0.0    0.0003      0.21       2      34 .]     188     220 ..     187     220 .. 0.93
   5 ?    2.6   0.0      0.17   1.2e+02      13      32 ..     240     259 ..     233     262 .. 0.89
   6 !   17.2   0.0   3.6e-06    0.0026       3      33 ..     263     293 ..     261     294 .. 0.94

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 2.6e-06
                -TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekalelkpr 33
                ++ n+G+++ qlG+ + A + le+al lk +
  MMETSP1325-20131115|4213_1 43 ILANKGLCLDQLGRAEDAVAVLEEALALKED 73
                689************************9975 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.073
                 TT-HHHHHHHHH---HHHH CS
   PF13181.1  14 lGdydkAkeylekalelkp 32 
                  G+y++A   + +++e +p
  MMETSP1325-20131115|4213_1  98 RGQYEEAADLFTECIEKDP 116
                 59**************988 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.1
                 HHTT-HHHHHHHHH---HHHH.. CS
   PF13181.1  12 rqlGdydkAkeylekalelkp.r 33 
                   lG+ ++A + +e +   +p +
  MMETSP1325-20131115|4213_1 131 HRLGRLEEATALFEDVYRSDPsN 153
                 679*************9999944 PP

  == domain 4    score: 11.3 bits;  conditional E-value: 0.0003
                 --TTT---HHHHTT-HHHHHHHHH---HHHH.H CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelkprn 34 
                 +++yn + +++++ +  +Ak ++ek+le +p++
  MMETSP1325-20131115|4213_1 188 NTRYNYAVCLLNTDKRPEAKDAFEKVLEEDPDY 220
                 679*************************99976 PP

  == domain 5    score: 2.6 bits;  conditional E-value: 0.17
                 HTT-HHHHHHHHH---HHHH CS
   PF13181.1  13 qlGdydkAkeylekalelkp 32 
                 q+Gd+ +A+  le+a+  +p
  MMETSP1325-20131115|4213_1 240 QKGDFAAAIPLLEQAIGRNP 259
                 89*************98887 PP

  == domain 6    score: 17.2 bits;  conditional E-value: 3.6e-06
                 -TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkpr 33 
                 ++ynlG +++  + y++Ake++ k+le+ p+
  MMETSP1325-20131115|4213_1 263 TLYNLGAAMMREKHYHEAKECFAKVLEMTPD 293
                 69*************************9987 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0       1.5   1.1e+03      11      32 ..      13      33 ..       8      45 .. 0.83
   2 !   10.1   0.4    0.0013      0.95      10      39 ..      50      81 ..      41      86 .. 0.77
   3 !    9.7   0.0    0.0018       1.3      13      38 ..      97     122 ..      88     129 .. 0.86
   4 !    9.9   0.0    0.0015       1.1      13      42 ..     132     161 ..     126     162 .. 0.91
   5 !    8.7   0.0    0.0037       2.7       3      42 ..     156     194 ..     154     196 .. 0.85
   6 !   13.9   0.1   7.9e-05     0.057       3      44 .]     189     230 ..     187     230 .. 0.93
   7 !   11.8   0.0   0.00039      0.28      11      37 ..     238     264 ..     232     267 .. 0.87
   8 !    9.2   0.0    0.0026       1.9       3      34 ..     263     294 ..     261     298 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 1.5
   PF13428.1 11 llalGdpdeAiallrralalaP 32
                ll+ Gd  +A+all+++la +P
  MMETSP1325-20131115|4213_1 13 LLNDGDAIGALALLDKILA-SP 33
                577899999*******998.45 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.0013
   PF13428.1 10 allalGdpdeAiallrrala..laPddaeall 39
                 l +lG+ ++A+a+l++ala   +P+ ae++ 
  MMETSP1325-20131115|4213_1 50 CLDQLGRAEDAVAVLEEALAlkEDPGIAEVRD 81
                56789************987335777777775 PP

  == domain 3    score: 9.7 bits;  conditional E-value: 0.0018
   PF13428.1  13 alGdpdeAiallrralalaPddaeal 38 
                 ++G+++eA++l+ + ++++P+   ++
  MMETSP1325-20131115|4213_1  97 ERGQYEEAADLFTECIEKDPEGQNFW 122
                 79******************855555 PP

  == domain 4    score: 9.9 bits;  conditional E-value: 0.0015
   PF13428.1  13 alGdpdeAiallrralalaPddaealllLa 42 
                 +lG+++eA al++++ + +P++ +++ lL+
  MMETSP1325-20131115|4213_1 132 RLGRLEEATALFEDVYRSDPSNTQVYSLLG 161
                 79**********************998886 PP

  == domain 5    score: 8.7 bits;  conditional E-value: 0.0037
   PF13428.1   3 allalarallalGdpdeAiallrralalaPddaealllLa 42 
                 ++ +l++ l  l +++eA  +l++ala + d +  ++++a
  MMETSP1325-20131115|4213_1 156 VYSLLGNNLCKLKRWAEASPVLEAALAEGAD-LNTRYNYA 194
                 68899**********************8876.67777666 PP

  == domain 6    score: 13.9 bits;  conditional E-value: 7.9e-05
   PF13428.1   3 allalarallalGdpdeAiallrralalaPddaealllLarl 44 
                 +++ +a  ll+     eA ++++++l+ +Pd + al +La l
  MMETSP1325-20131115|4213_1 189 TRYNYAVCLLNTDKRPEAKDAFEKVLEEDPDYDLALDALAML 230
                 78999999******************************9975 PP

  == domain 7    score: 11.8 bits;  conditional E-value: 0.00039
   PF13428.1  11 llalGdpdeAiallrralalaPddaea 37 
                 l + Gd+++Ai ll++a+ ++P+d ++
  MMETSP1325-20131115|4213_1 238 LCQKGDFAAAIPLLEQAIGRNPKDTTL 264
                 5678*******************9876 PP

  == domain 8    score: 9.2 bits;  conditional E-value: 0.0026
   PF13428.1   3 allalarallalGdpdeAiallrralalaPdd 34 
                 +l+ l++a+++  ++ eA +++ ++l+  Pd+
  MMETSP1325-20131115|4213_1 263 TLYNLGAAMMREKHYHEAKECFAKVLEMTPDH 294
                 5899**************************97 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.3   7.4e-08   5.3e-05       2      61 ..       8      73 ..       7      76 .. 0.93
   2 !   16.7   0.0   1.1e-05     0.008       9      64 ..      97     153 ..      90     154 .. 0.83
   3 !   23.1   0.2   1.1e-07   7.6e-05       3      64 ..     160     220 ..     158     221 .. 0.96
   4 !   21.2   0.2   4.3e-07   0.00031      12      64 ..     202     261 ..     197     262 .. 0.93
   5 !    7.6   0.0    0.0076       5.5       1      32 [.     265     296 ..     265     299 .. 0.92

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 7.4e-08
   PF13432.1  2 alArallraGdydeAlaaleaalala....PeaaeallllaeallrlgrldeAaallraal..ala 61
                ++A  ll++Gd   Ala+l+++la +     + a +l + + +l +lgr ++A+a+l++al  +++
  MMETSP1325-20131115|4213_1  8 DKATKLLNDGDAIGALALLDKILASPdmteQQKATILANKGLCLDQLGRAEDAVAVLEEALalKED 73
                68999************************999*****************************55555 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 1.1e-05
   PF13432.1   9 raGdydeAlaaleaalalaPeaaeall.llaeallrlgrldeAaallraalalaPdd 64 
                 ++G+y+eA++++ + ++++Pe  +++l + a + +rlgrl+eA al++  ++ +P++
  MMETSP1325-20131115|4213_1  97 ERGQYEEAADLFTECIEKDPEGQNFWLfNKALMIHRLGRLEEATALFEDVYRSDPSN 153
                 79*****************987776651566666688*************9999987 PP

  == domain 3    score: 23.1 bits;  conditional E-value: 1.1e-07
   PF13432.1   3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPdd 64 
                 l+++l ++++++eA ++leaala+   + + ++++a++ll   + +eA  ++++ l+++Pd+
  MMETSP1325-20131115|4213_1 160 LGNNLCKLKRWAEASPVLEAALAEGA-DLNTRYNYAVCLLNTDKRPEAKDAFEKVLEEDPDY 220
                 899**********************7.9********************************96 PP

  == domain 4    score: 21.2 bits;  conditional E-value: 4.3e-07
   PF13432.1  12 dydeAlaaleaalalaPeaaeallllaeallrl.......grldeAaallraalalaPdd 64 
                 +  eA +a+e++l+++P++  al +la++ +r        g++++A+ ll++a++++P+d
  MMETSP1325-20131115|4213_1 202 KRPEAKDAFEKVLEEDPDYDLALDALAMLNARFgselcqkGDFAAAIPLLEQAIGRNPKD 261
                 6789******************************************************87 PP

  == domain 5    score: 7.6 bits;  conditional E-value: 0.0076
   PF13432.1   1 lalArallraGdydeAlaaleaalalaPeaae 32 
                 + l+ a +r ++y eA +++ ++l+  P++  
  MMETSP1325-20131115|4213_1 265 YNLGAAMMREKHYHEAKECFAKVLEMTPDHKM 296
                 689999*********************99876 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0036       2.6       8      83 ..      22      66 ..       9      79 .. 0.53
   2 !   21.8   0.0   1.9e-07   0.00014       2      83 ..      98     179 ..      97     180 .. 0.91
   3 ?    4.1   0.1     0.064        46      24      50 ..     188     212 ..     176     233 .. 0.59
   4 !   13.2   0.0   9.3e-05     0.067       2      52 ..     241     289 ..     240     299 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0036
                HHHHHHHHCCC-ST-H..HHHCHHHHHHHHHH---HHHHHHHHHCTSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2  8 Alflaekllaespkdp..edaylyalAlclylngeykrAyellrkleldssslgcryllArcllklgkydeAiavLek 83
                Al l++k+la+ + ++  +++ l +++lcl ++g+ + A+ +l                                 e+
  MMETSP1325-20131115|4213_1 22 ALALLDKILASPDMTEqqKATILANKGLCLDQLGRAEDAVAVL---------------------------------EE 66
                4445555555544422323333333555555555555555555.................................44 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 1.9e-07
                 TT-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2   2 qhnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83 
                 +++y++A  l+ + ++++p+  ++  l+++Al   ++g+ ++A  l+++    d+s+ +   ll+  l kl+++ eA  vLe+
  MMETSP1325-20131115|4213_1  98 RGQYEEAADLFTECIEKDPEG-QNFWLFNKALMIHRLGRLEEATALFEDvYRSDPSNTQVYSLLGNNLCKLKRWAEASPVLEA 179
                 689***************942.7778888******************999888889999999******************997 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.064
                 HHHCHHHHHHHHHH---HHHHHHHHHC CS
   PF12895.2  24 edaylyalAlclylngeykrAyellrk 50 
                 ++ y y  A cl+++ +  +A ++++k
  MMETSP1325-20131115|4213_1 188 NTRYNY--AVCLLNTDKRPEAKDAFEK 212
                 444555..6666666666666666644 PP

  == domain 4    score: 13.2 bits;  conditional E-value: 9.3e-05
                 TT-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TS CS
   PF12895.2   2 qhnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.le 52 
                 ++++  A+ l+e+++  +pk   d+ ly+l+ ++++ ++y++A e + k le
  MMETSP1325-20131115|4213_1 241 KGDFAAAIPLLEQAIGRNPK---DTTLYNLGAAMMREKHYHEAKECFAKvLE 289
                 678899***********984...589*****************999966544 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1     0.014        10       5      27 ..      46      68 ..      43      70 .. 0.89
   2 ?    7.1   0.0     0.011       7.6      11      32 ..      97     117 ..      88     117 .. 0.85
   3 ?    3.9   0.0      0.11        77       3      32 ..     123     152 ..     122     153 .. 0.77
   4 !   15.6   0.0     2e-05     0.014       3      32 ..     190     219 ..     189     220 .. 0.93
   5 ?    5.1   0.0     0.047        34       7      32 ..     228     260 ..     222     261 .. 0.76
   6 !   11.0   0.0   0.00058      0.41       3      33 .]     264     294 ..     262     294 .. 0.93

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.014
                HHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAlealerli 27
                + +l++++lg++++A+++le+ +
  MMETSP1325-20131115|4213_1 46 NKGLCLDQLGRAEDAVAVLEEAL 68
                679*****99**********987 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  11 yklgdtdeAlealerlikeyPd 32 
                 ++ g+++eA +++ ++i++ P+
  MMETSP1325-20131115|4213_1  97 ER-GQYEEAADLFTECIEKDPE 117
                 44.5***************995 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   3 lyklalsyyklgdtdeAlealerlikeyPd 32 
                 l++ al   +lg+ +eA +++e++ ++ P 
  MMETSP1325-20131115|4213_1 123 LFNKALMIHRLGRLEEATALFEDVYRSDPS 152
                 677774444567************998885 PP

  == domain 4    score: 15.6 bits;  conditional E-value: 2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   3 lyklalsyyklgdtdeAlealerlikeyPd 32 
                  y++a +++++++  eA++a+e++++e Pd
  MMETSP1325-20131115|4213_1 190 RYNYAVCLLNTDKRPEAKDAFEKVLEEDPD 219
                 59********98888**************8 PP

  == domain 5    score: 5.1 bits;  conditional E-value: 0.047
                 HHHHHH.H......HHHHHHHHHHHHHHHH-TT CS
   PF13174.1   7 alsyyk.l......gdtdeAlealerlikeyPd 32 
                 a++  + +      gd+++A+ +le+ i + P+
  MMETSP1325-20131115|4213_1 228 AMLNARfGselcqkGDFAAAIPLLEQAIGRNPK 260
                 555555446666668***************997 PP

  == domain 6    score: 11.0 bits;  conditional E-value: 0.00058
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT- CS
   PF13174.1   3 lyklalsyyklgdtdeAlealerlikeyPdS 33 
                 ly+l+ ++ + +++ eA+e + ++++  Pd+
  MMETSP1325-20131115|4213_1 264 LYNLGAAMMREKHYHEAKECFAKVLEMTPDH 294
                 9*********88*************998885 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1     2e-05     0.014       3      36 .]      45      78 ..      43      78 .. 0.89
   2 !    9.3   0.1    0.0013      0.95      11      35 ..      97     119 ..      94     120 .. 0.90
   3 ?   -0.9   0.0       2.3   1.7e+03      11      33 ..     132     152 ..     124     154 .. 0.84
   4 ?    3.1   0.0      0.12        89       2      27 ..     157     183 ..     156     193 .. 0.84
   5 ?   -0.4   0.0       1.7   1.2e+03       4      32 ..     192     218 ..     189     219 .. 0.81
   6 !    8.4   0.0    0.0025       1.8       9      32 ..     238     259 ..     235     262 .. 0.83
   7 ?    6.2   0.0     0.012       8.8       1      31 [.     263     293 ..     263     297 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2e-05
   PF13176.1  3 lnLarlysrlgdyekAielyeraLaltkdpldae 36
                 n + +  +lg+ e+A+ ++e+aLal++dp++ae
  MMETSP1325-20131115|4213_1 45 ANKGLCLDQLGRAEDAVAVLEEALALKEDPGIAE 78
                667778899*********************9985 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0013
   PF13176.1  11 rlgdyekAielyeraLaltkdplda 35 
                 ++g+ye+A++l+++   ++kdp++ 
  MMETSP1325-20131115|4213_1  97 ERGQYEEAADLFTE--CIEKDPEGQ 119
                 57************..******985 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 2.3
   PF13176.1  11 rlgdyekAielyeraLaltkdpl 33 
                 rlg+ e+A  l+e   + ++dp+
  MMETSP1325-20131115|4213_1 132 RLGRLEEATALFED--VYRSDPS 152
                 89999***999998..7777776 PP

  == domain 4    score: 3.1 bits;  conditional E-value: 0.12
   PF13176.1   2 llnLarlysrlgdyekAielyeraL.a 27 
                 ++ L++  ++l ++ +A  ++e+aL +
  MMETSP1325-20131115|4213_1 157 YSLLGNNLCKLKRWAEASPVLEAALaE 183
                 778888899**************7744 PP

  == domain 5    score: -0.4 bits;  conditional E-value: 1.7
   PF13176.1   4 nLarlysrlgdyekAielyeraLaltkdp 32 
                 n a++  +  ++ +A +++e+  +l++dp
  MMETSP1325-20131115|4213_1 192 NYAVCLLNTDKRPEAKDAFEK--VLEEDP 218
                 56777777788899*******..999998 PP

  == domain 6    score: 8.4 bits;  conditional E-value: 0.0025
   PF13176.1   9 ysrlgdyekAielyeraLaltkdp 32 
                  ++ gd+  Ai l+e+  a+ + p
  MMETSP1325-20131115|4213_1 238 LCQKGDFAAAIPLLEQ--AIGRNP 259
                 5789************..887766 PP

  == domain 7    score: 6.2 bits;  conditional E-value: 0.012
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkd 31 
                 +l+nL+ + +r   y +A e++ + L++t d
  MMETSP1325-20131115|4213_1 263 TLYNLGAAMMREKHYHEAKECFAKVLEMTPD 293
                 799*********************6666544 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.3   9.4e-05     0.068       2      33 ..      41      72 ..      41      73 .. 0.94
   2 ?    5.9   0.0     0.016        11       9      28 ..      92     111 ..      86     114 .. 0.83
   3 ?    6.5   0.0      0.01       7.4       9      28 ..     127     146 ..     123     148 .. 0.88
   4 !    8.8   0.0    0.0019       1.4       5      30 ..     157     182 ..     155     182 .. 0.93
   5 ?    3.5   0.0     0.085        61       3      30 ..     188     215 ..     187     215 .. 0.92
   6 ?    2.3   0.0      0.21   1.5e+02      12      28 ..     238     254 ..     227     257 .. 0.87
   7 ?    6.1   0.0     0.013       9.6       3      31 ..     262     290 ..     262     291 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.4e-05
   PF13374.1  2 aaalnnLAlalrargryeeAlaleeealairr 33
                a+ l n +l l ++gr e+A+a +eeala+++
  MMETSP1325-20131115|4213_1 41 ATILANKGLCLDQLGRAEDAVAVLEEALALKE 72
                78899************************986 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.016
   PF13374.1   9 AlalrargryeeAlaleeea 28 
                 A++ ++rg+yeeA +l+ e+
  MMETSP1325-20131115|4213_1  92 AVRTAERGQYEEAADLFTEC 111
                 666789**********9987 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.01
   PF13374.1   9 AlalrargryeeAlaleeea 28 
                 Al+ +++gr+eeA al+e++
  MMETSP1325-20131115|4213_1 127 ALMIHRLGRLEEATALFEDV 146
                 788899***********987 PP

  == domain 4    score: 8.8 bits;  conditional E-value: 0.0019
   PF13374.1   5 lnnLAlalrargryeeAlaleeeala 30 
                 ++ L++ l++++r++eA + +e+ala
  MMETSP1325-20131115|4213_1 157 YSLLGNNLCKLKRWAEASPVLEAALA 182
                 5679********************97 PP

  == domain 5    score: 3.5 bits;  conditional E-value: 0.085
   PF13374.1   3 aalnnLAlalrargryeeAlaleeeala 30 
                  ++ n A+ l +++++ eA + +e++l+
  MMETSP1325-20131115|4213_1 188 NTRYNYAVCLLNTDKRPEAKDAFEKVLE 215
                 678899*******************996 PP

  == domain 6    score: 2.3 bits;  conditional E-value: 0.21
   PF13374.1  12 lrargryeeAlaleeea 28 
                 l++ g++++A +l+e+a
  MMETSP1325-20131115|4213_1 238 LCQKGDFAAAIPLLEQA 254
                 6677************8 PP

  == domain 7    score: 6.1 bits;  conditional E-value: 0.013
   PF13374.1   3 aalnnLAlalrargryeeAlaleeealai 31 
                 ++l nL+ a ++ + y eA + + ++l++
  MMETSP1325-20131115|4213_1 262 TTLYNLGAAMMREKHYHEAKECFAKVLEM 290
                 699******************99999987 PP

>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.83     6e+02      64      92 ..     330     357 ..     280     401 .. 0.72
   2 !   34.2   9.1   3.3e-11   2.4e-08      99     148 .]     672     795 ..     461     795 .. 0.71

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.83
   PF10152.4  64 aaarrsggpppppgaraeaaaqeaeaara 92 
                 ++ r +gg+ppp + r+ ++++++e+a++
  MMETSP1325-20131115|4213_1 330 VKIRGKGGRPPPRE-RVVPSPAQQEEAQT 357
                 45566677777777.66666555555544 PP

  == domain 2    score: 34.2 bits;  conditional E-value: 3.3e-11
   PF10152.4  99 e..........................................................................pealaegrltvrkdpryakYfkmlklgVpaeavknKmqaeGldpelldt 148
                 +                                                                                 ++tv++dp +akYfkmlk+g+p +av +Km +eGld+++l++
  MMETSP1325-20131115|4213_1 672 AmadgddkkaakkalaaklgaklggkfgggaggmpaggdgsfwgmvqmqgdrlkdleelvtggsgikvmpkagegGDDADSLPMTVAEDPAFAKYFKMLKMGLPPPAVAQKMAMEGLDSQILNN 795
                 0222333333334555667788888888888888888888888888888888888888888888888888777774444667899************************************985 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.22   1.6e+02      13      33 ..      41      61 ..      37      62 .. 0.87
   2 ?   -0.8   0.0       3.1   2.2e+03       5      32 ..      69     104 ..      64     105 .. 0.73
   3 !    7.8   0.0    0.0051       3.7       1      32 [.     107     139 ..     107     141 .. 0.94
   4 ?    5.7   0.0     0.025        18       7      32 ..     148     173 ..     142     173 .. 0.86
   5 ?    1.7   0.0      0.48   3.4e+02      14      31 ..     188     205 ..     181     208 .. 0.80
   6 ?    5.2   0.0     0.036        26       1      32 [.     209     247 ..     209     249 .. 0.81
   7 ?    3.3   0.0      0.15   1.1e+02       1      18 [.     250     267 ..     250     282 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.22
   PF13431.1 13 adaynnLAelllnnGdleeAe 33
                a  + n++++l  +G+ e+A 
  MMETSP1325-20131115|4213_1 41 ATILANKGLCLDQLGRAEDAV 61
                66789**************96 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 3.1
   PF13431.1   5 aleldPnnadaynnLAelll........nnGdleeA 32 
                 al+ dP  a+++ + A+  l        ++G++eeA
  MMETSP1325-20131115|4213_1  69 ALKEDPGIAEVRDQIAVSILtdkavrtaERGQYEEA 104
                 556688889998888874444777777788888887 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0051
   PF13431.1   1 lyekaleldPnnadayn.nLAelllnnGdleeA 32 
                 l+ +++e+dP+  +++  n+A+  +++G+leeA
  MMETSP1325-20131115|4213_1 107 LFTECIEKDPEGQNFWLfNKALMIHRLGRLEEA 139
                 6899************99*************98 PP

  == domain 4    score: 5.7 bits;  conditional E-value: 0.025
   PF13431.1   7 eldPnnadaynnLAelllnnGdleeA 32 
                 + dP n+++y  L++ l+++++++eA
  MMETSP1325-20131115|4213_1 148 RSDPSNTQVYSLLGNNLCKLKRWAEA 173
                 679****************9999987 PP

  == domain 5    score: 1.7 bits;  conditional E-value: 0.48
   PF13431.1  14 daynnLAelllnnGdlee 31 
                 + ++n+A++lln  +  e
  MMETSP1325-20131115|4213_1 188 NTRYNYAVCLLNTDKRPE 205
                 679********9876555 PP

  == domain 6    score: 5.2 bits;  conditional E-value: 0.036
   PF13431.1   1 lyekaleldPnnadaynnLAelll.......nnGdleeA 32 
                 ++ek le dP++  a+ +LA l +        +Gd++ A
  MMETSP1325-20131115|4213_1 209 AFEKVLEEDPDYDLALDALAMLNArfgselcQKGDFAAA 247
                 599*************99999998666666666776666 PP

  == domain 7    score: 3.3 bits;  conditional E-value: 0.15
   PF13431.1   1 lyekaleldPnnadaynn 18 
                 l+e+a+ ++P+++ +yn 
  MMETSP1325-20131115|4213_1 250 LLEQAIGRNPKDTTLYNL 267
                 5799999***99888874 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.4   0.00031      0.22      34      66 ..      46      78 ..      13      85 .. 0.80
   2 ?    6.0   0.0     0.014       9.9      34      63 ..      90     119 ..      81     123 .. 0.88
   3 ?    2.0   0.0      0.24   1.7e+02      34      65 ..     125     156 ..     119     160 .. 0.83
   4 !    7.6   0.4    0.0042         3      26      73 .]     184     231 ..     164     231 .. 0.82
   5 ?    3.6   0.0     0.074        53      41      66 ..     240     265 ..     235     272 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00031
   PF13371.1 34 DrGlllaqlgclaaAaedLeaflelcpdapdae 66
                  Gl+l qlg+ + A++ Le +l+l +d+  ae
  MMETSP1325-20131115|4213_1 46 NKGLCLDQLGRAEDAVAVLEEALALKEDPGIAE 78
                68*********************9998666554 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.014
   PF13371.1  34 DrGlllaqlgclaaAaedLeaflelcpdap 63 
                 D +   a++g++++Aa+ ++ ++e++p+++
  MMETSP1325-20131115|4213_1  90 DKAVRTAERGQYEEAADLFTECIEKDPEGQ 119
                 77777899*******************987 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.24
   PF13371.1  34 DrGlllaqlgclaaAaedLeaflelcpdapda 65 
                   +l+ ++lg+l++A + +e    ++p+  ++
  MMETSP1325-20131115|4213_1 125 NKALMIHRLGRLEEATALFEDVYRSDPSNTQV 156
                 679999*************9999998877665 PP

  == domain 4    score: 7.6 bits;  conditional E-value: 0.0042
   PF13371.1  26 PddpyerRDrGlllaqlgclaaAaedLeaflelcpdapdaeliraqln 73 
                   d+  r+ ++ +l  ++   +A +++e  le +pd + a  + a+ln
  MMETSP1325-20131115|4213_1 184 GADLNTRYNYAVCLLNTDKRPEAKDAFEKVLEEDPDYDLALDALAMLN 231
                 4588899****************************9999999999886 PP

  == domain 5    score: 3.6 bits;  conditional E-value: 0.074
   PF13371.1  41 qlgclaaAaedLeaflelcpdapdae 66 
                 q g++aaA+  Le+++ + p + + +
  MMETSP1325-20131115|4213_1 240 QKGDFAAAIPLLEQAIGRNPKDTTLY 265
                 789*****************998765 PP

>> PF04733.9  Coatomer epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.17   1.2e+02     192     230 ..      34      70 ..      27      80 .. 0.81
   2 !   10.0   0.0   0.00044      0.32     201     255 ..      85     140 ..      77     156 .. 0.86
   3 !    8.7   0.0    0.0011       0.8     183     261 ..     136     212 ..     134     234 .. 0.73
   4 ?    1.4   0.0      0.18   1.3e+02     213     248 ..     240     274 ..     224     299 .. 0.68

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.17
                 HHHHHS---HHHH---HHHHHH---HHHH---HHHHHHH CS
   PF04733.9 192 elsekykstplllngkAvvslllgryeeAeslLkeaLdk 230
                 +++e+  +   +l  k  +  +lgr e+A  +L+eaL  
  MMETSP1325-20131115|4213_1  34 DMTEQ--QKATILANKGLCLDQLGRAEDAVAVLEEALAL 70 
                 56666..55667888899999**************9964 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00044
                 HHHH---HHHHHH---HHHH---HHHHHHH----HH.HHHHHHHHHHH----HHHH CS
   PF04733.9 201 plllngkAvvslllgryeeAeslLkeaLdkdakdee.tLiNlvvaaqhlgkdaevs 255
                   +l+ kAv     g+yeeA  l  e ++kd++ ++  L N   +++ lg+ +e++
  MMETSP1325-20131115|4213_1  85 VSILTDKAVRTAERGQYEEAADLFTECIEKDPEGQNfWLFNKALMIHRLGRLEEAT 140
                 6799***************************9987735999999999999987765 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHS---HHH..H---HHHHHH---HHHH---HHHHHHH----HHHHHHHHHHHHH----HHHHHHHHHH CS
   PF04733.9 183 iqdAyyifqelsekykstpll..lngkAvvslllgryeeAeslLkeaLdkdakdeetLiNlvvaaqhlgkdaevsernlsq 261
                 +++A  +f+++    +s++ +  l g+  ++  l+r++eA  +L+ aL     d +t  N  v+ ++++k +e+++  +++
  MMETSP1325-20131115|4213_1 136 LEEATALFEDVYRSDPSNTQVysLLGNNLCK--LKRWAEASPVLEAALAEG-ADLNTRYNYAVCLLNTDKRPEAKD-AFEK 212
                 5677777888766655665552255666665..68*************865.6899**************977654.3444 PP

  == domain 4    score: 1.4 bits;  conditional E-value: 0.18
                 H---HHHH---HHHHHHH----HHHHHHHHHHHHH- CS
   PF04733.9 213 llgryeeAeslLkeaLdkdakdeetLiNlvvaaqhl 248
                 + g++++A  lL++a+ +++kd  tL Nl  a+   
  MMETSP1325-20131115|4213_1 240 QKGDFAAAIPLLEQAIGRNPKDT-TLYNLGAAMMRE 274
                 3579***************9996.899986554433 PP

>> PF10300.4  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.017        12     272     330 ..      51     114 ..      39     121 .. 0.72
   2 !   14.6   0.0   1.2e-05    0.0083     240     360 ..      97     208 ..      82     222 .. 0.77
   3 ?   -3.0   0.0       2.6   1.9e+03     275     329 ..     241     289 ..     238     292 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.017
   PF10300.4 272 eslkgnldeAlelleeiid.....esqselkqvkalclfelalclvllheyeeaaesfleLlel 330
                 +   g+ ++A+++lee+++       ++   q+   +l ++a+  + + +yeeaa+ f+e+ e+
  MMETSP1325-20131115|4213_1  51 LDQLGRAEDAVAVLEEALAlkedpGIAEVRDQIAVSILTDKAVRTAERGQYEEAADLFTECIEK 114
                 4455556666666666553000003456778******************************986 PP

  == domain 2    score: 14.6 bits;  conditional E-value: 1.2e-05
   PF10300.4 240 leapleeleelLeksrkrfPksa.lwllfearieslkgnldeAlelleeiidesqselkqvkalclfelalclvllheyeeaaesfleLlelskwSkalYaYlaaacllelgreekkaeake 360
                 + ++ ee+ +l+ +  ++ P+++  wl+++a +    g+l+eA +l+e+++  s+ +  qv +l+      +l+ l+++ ea    +  l +     + Y+Y  a+cll++ +    +eak+
  MMETSP1325-20131115|4213_1  97 ERGQYEEAADLFTECIEKDPEGQnFWLFNKALMIHRLGRLEEATALFEDVY-RSDPSNTQVYSLLG----NNLCKLKRWAEASPVLEAALAEGADLNTRYNY--AVCLLNTDKR---PEAKD 208
                 5677899999999999999**97589************************9.89999999999975....45667788999988888888888888888888..5566655554...33333 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 2.6
   PF10300.4 275 kgnldeAlelleeiidesqselkqvkalclfelalclvllheyeeaaesfleLle 329
                 kg++  A+ lle++i       +  k   l++l+ +++ +++y+ea e f ++le
  MMETSP1325-20131115|4213_1 241 KGDFAAAIPLLEQAI------GRNPKDTTLYNLGAAMMREKHYHEAKECFAKVLE 289
                 566666666666665......3555778899999999999999999999988776 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.2     0.035        25       3      32 ..      39      68 ..      38      70 .. 0.90
   2 !    9.6   0.1     0.001      0.72      10      33 ..      90     113 ..      86     114 .. 0.92
   3 ?   -2.3   0.0       5.2   3.7e+03       8      26 ..     123     141 ..     121     144 .. 0.86
   4 ?   -2.9   0.0       8.3     6e+03      18      32 ..     241     255 ..     240     256 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.035
                HHHHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF04212.13  3 skAlelikkAveaDeagkyeeAlelYkeAl 32
                +kA  l++k++  D+ g+ e+A+   +eAl
  MMETSP1325-20131115|4213_1 39 QKATILANKGLCLDQLGRAEDAVAVLEEAL 68
                69999*****************99888887 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.001
                 HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF04212.13  10 kkAveaDeagkyeeAlelYkeAle 33 
                 +kAv+  e g+yeeA +l +e++e
  MMETSP1325-20131115|4213_1  90 DKAVRTAERGQYEEAADLFTECIE 113
                 79*******************998 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 5.2
                 HHHHHHHHHHTT-HHHHHH CS
  PF04212.13   8 likkAveaDeagkyeeAle 26 
                 l++kA+ + + g++eeA  
  MMETSP1325-20131115|4213_1 123 LFNKALMIHRLGRLEEATA 141
                 6899************976 PP

  == domain 4    score: -2.9 bits;  conditional E-value: 8.3
                 TT-HHHHHHHHHHHH CS
  PF04212.13  18 agkyeeAlelYkeAl 32 
                 +g++++A+ l ++A+
  MMETSP1325-20131115|4213_1 241 KGDFAAAIPLLEQAI 255
                 899999999988888 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.46   3.3e+02      21      32 ..      55      66 ..      47      67 .. 0.84
   2 ?    2.8   0.1     0.099        71      19      31 ..     132     144 ..     132     145 .. 0.88
   3 ?   -1.8   0.0       2.9   2.1e+03      15      31 ..     162     178 ..     153     179 .. 0.78
   4 ?    3.8   0.0     0.049        35      17      32 ..     238     253 ..     236     255 .. 0.93

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.46
   PF12854.2 21 GrvdeAvellde 32
                Gr ++Av +l+e
  MMETSP1325-20131115|4213_1 55 GRAEDAVAVLEE 66
                999*******98 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.099
   PF12854.2  19 raGrvdeAvelld 31 
                 r Gr++eA  l++
  MMETSP1325-20131115|4213_1 132 RLGRLEEATALFE 144
                 56**********8 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 2.9
   PF12854.2  15 dGlCraGrvdeAvelld 31 
                 + lC+  r  eA  +l+
  MMETSP1325-20131115|4213_1 162 NNLCKLKRWAEASPVLE 178
                 679*****999977765 PP

  == domain 4    score: 3.8 bits;  conditional E-value: 0.049
   PF12854.2  17 lCraGrvdeAvellde 32 
                 lC++G+   A+ ll++
  MMETSP1325-20131115|4213_1 238 LCQKGDFAAAIPLLEQ 253
                 8************997 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       2.8     2e+03      12      25 ..      14      27 ..      13      28 .. 0.83
   2 ?    7.8   0.1    0.0063       4.5       5      26 .]      45      66 ..      41      66 .. 0.86
   3 ?    1.9   0.1      0.52   3.7e+02      12      23 ..      96     107 ..      91     108 .. 0.89
   4 ?    7.7   0.0     0.007         5       6      25 ..     125     144 ..     123     145 .. 0.86
   5 ?   -1.0   0.0       4.3   3.1e+03       3      25 ..     189     211 ..     188     212 .. 0.88
   6 ?   -0.8   0.0       3.8   2.7e+03      15      26 .]     242     253 ..     241     253 .. 0.93
   7 ?   -1.9   0.3       8.7   6.2e+03      18      26 .]     353     361 ..     351     361 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 2.8
                HH-------HHHHH CS
   PF07721.9 12 lalGdldeAralle 25
                l  Gd+  A+all+
  MMETSP1325-20131115|4213_1 14 LNDGDAIGALALLD 27
                5679********98 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0063
                ---HHHHHH-------HHHHHT CS
   PF07721.9  5 laLArallalGdldeAraller 26
                ++ +  l +lG++++A a+le+
  MMETSP1325-20131115|4213_1 45 ANKGLCLDQLGRAEDAVAVLEE 66
                67788899************97 PP

  == domain 3    score: 1.9 bits;  conditional E-value: 0.52
                 HH-------HHH CS
   PF07721.9  12 lalGdldeAral 23 
                 +++G+++eA++l
  MMETSP1325-20131115|4213_1  96 AERGQYEEAADL 107
                 689******987 PP

  == domain 4    score: 7.7 bits;  conditional E-value: 0.007
                 --HHHHHH-------HHHHH CS
   PF07721.9   6 aLArallalGdldeAralle 25 
                 + A   ++lG+l+eA al+e
  MMETSP1325-20131115|4213_1 125 NKALMIHRLGRLEEATALFE 144
                 668888***********988 PP

  == domain 5    score: -1.0 bits;  conditional E-value: 4.3
                 HH---HHHHHH-------HHHHH CS
   PF07721.9   3 allaLArallalGdldeAralle 25 
                 +++++A  ll     +eA +++e
  MMETSP1325-20131115|4213_1 189 TRYNYAVCLLNTDKRPEAKDAFE 211
                 5899*************988876 PP

  == domain 6    score: -0.8 bits;  conditional E-value: 3.8
                 ------HHHHHT CS
   PF07721.9  15 GdldeAraller 26 
                 Gd+++A  lle+
  MMETSP1325-20131115|4213_1 242 GDFAAAIPLLEQ 253
                 9*****999997 PP

  == domain 7    score: -1.9 bits;  conditional E-value: 8.7
                 ---HHHHHT CS
   PF07721.9  18 deAraller 26 
                 +eA+++l++
  MMETSP1325-20131115|4213_1 353 EEAQTWLAE 361
                 89****975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (913 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 1.51u 0.37s 00:00:01.88 Elapsed: 00:00:00.89
# Mc/sec: 2458.29
//
Query:       MMETSP1325-20131115|4221_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.042   13.1   0.3      0.043   13.1   0.2    1.0  1  PF10230.4 Uncharacterised conserved protein (DUF2305)


Domain annotation for each model (and alignments):
>> PF10230.4  Uncharacterised conserved protein (DUF2305)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   3.2e-06     0.043     175     218 ..      16      61 ..       3      77 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.2e-06
   PF10230.4 175 se.aveetaaelksprvvrqalhlakdEmreikedd.qdelikaae 218
                 s  +v++++  +++++ v q+l l ++Em  i+e + ++ + ++++
  MMETSP1325-20131115|4221_1  16 SAvSVDDATLLARHKEHVGQMLALLETEMVMIAEVEaNQSFNQQHR 61 
                 33589999**************************995555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|4222_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       689  (0.050395); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 584.71
//
Query:       MMETSP1325-20131115|4224_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|4225_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-16   58.7   0.1    1.5e-15   57.6   0.1    1.5  1  PF00856.23 SET domain


Domain annotation for each model (and alignments):
>> PF00856.23  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.1   1.1e-19   1.5e-15      10     163 ..       4     101 ..       2     102 .. 0.82

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 1.1e-19
                 B----EEEEECCCEEECCCCHH...............----TTCHHHHHHHHHHHTHHHHHHH.TTTS.GGG..HHHHHHHHHHHHHH.EE--SS-TCCEECCEECEE-TCGGGTEE-SS.SEEEEEEES.TTSSEEEEEESS-B-TT-B-EE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00856.23  10 ipkGefvceyvgelltddeaekaddagtilqakkelaadeakkstakskrqkagksvlsfaalsarsgmlksalaasvaasesaavpkatsdeleeeeseyvidakllgpvarflNHSCdpNltvqfvfv.trgprvalrAtrdIpkGeEltidY 163
                 +pk ++++ey ge ++++ a+ +           e+                                                 + +  s +l++ + ++++da+ +g  arf+NH C+pN +++ +    +++r++++A+r  ++GeE+++dY
  MMETSP1325-20131115|4225_1   4 VPKHSMIVEYMGETVRTAIADLR-----------EKMY----------------------------------------------EEEGHGSCYLFRLDRNEIVDATKKGCHARFINHCCSPNSYAKVITLeGGSKRIVFFALRTLEPGEEIFYDY 101
                 56666666777777777777762...........1222..............................................23345589**********************************9999************************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 560.66
//
Query:       MMETSP1325-20131115|4227_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 803.78
//
Query:       MMETSP1325-20131115|4223_1  [L=664]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       463  (0.0338648); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.98u 0.33s 00:00:01.31 Elapsed: 00:00:00.65
# Mc/sec: 2447.97
//
Query:       MMETSP1325-20131115|4229_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-12   47.8   0.1    1.6e-12   47.4   0.1    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
    1.5e-11   44.3   0.5    1.1e-05   25.6   0.0    2.2  2  PF13637.1  Ankyrin repeats (many copies)
    8.8e-11   40.9   0.4    8.8e-06   25.1   0.0    3.1  3  PF00023.25 Ankyrin repeat
    1.9e-10   40.5   0.3    4.9e-10   39.2   0.1    1.7  2  PF13857.1  Ankyrin repeats (many copies)
    9.6e-07   28.3   0.1     0.0085   16.1   0.0    3.3  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.1     6e-16   1.6e-12       1      80 [.      44     134 ..      44     139 .. 0.85

  Alignments for each domain:
  == domain 1    score: 47.4 bits;  conditional E-value: 6e-16
   PF12796.2   1 LhlAaengnlelvklLlekgadvdl..get.......pLhlAaeagnleivklLleagadvnakdkegntpLhlAvr..nghlelvklLle 80 
                 L  Aa  g+   v++ l+++ad++   ++t       +Lh A+e g++++v +L+++gad+ ++d +g+tpL l  +    ++e+++ Ll+
  MMETSP1325-20131115|4229_1  44 LGEAAGLGDTAQVMWCLAHKADINAasNSTtdksmksALHRACEGGHVNTVLVLMQNGADLLQRDFNGRTPLDLTSQtrPANYEVLEKLLT 134
                 5689*********************983335777888***********************************9986611446777777776 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.1     2e-08   5.4e-05       8      53 ..      47      97 ..      46      98 .. 0.76
   2 !   25.6   0.0   4.1e-09   1.1e-05       3      54 .]      80     133 ..      79     133 .. 0.94

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 2e-08
   PF13637.1  8 aaisgrlelvklLlekgidinrt.desGn....taLhiAalrgnieilklL 53
                aa  g++  v+++l++++din+  ++  +    +aLh+A+++g+++ +  L
  MMETSP1325-20131115|4229_1 47 AAGLGDTAQVMWCLAHKADINAAsNSTTDksmkSALHRACEGGHVNTVLVL 97
                5557888889*********999964332233337***********988766 PP

  == domain 2    score: 25.6 bits;  conditional E-value: 4.1e-09
   PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrg..nieilklLl 54 
                 +aLh+a+  g++ +v  L ++g+d+ ++d +G+t+L++  ++   n+e+l+ Ll
  MMETSP1325-20131115|4229_1  80 SALHRACEGGHVNTVLVLMQNGADLLQRDFNGRTPLDLTSQTRpaNYEVLEKLL 133
                 69**************************999******99988889999999886 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0038        10       9      32 ..      47      70 ..      46      71 .. 0.86
   2 !   25.1   0.0   3.2e-09   8.8e-06       4      32 ..      80     108 ..      78     109 .. 0.95
   3 !    6.6   0.0    0.0023       6.3       1      23 [.     110     134 ..     110     140 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0038
                HHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  9 AalrgnlevvklLlsqGAdlnaqd 32
                Aa  g++  v + l + Ad+na  
  MMETSP1325-20131115|4229_1 47 AAGLGDTAQVMWCLAHKADINAAS 70
                7778888999999********975 PP

  == domain 2    score: 25.1 bits;  conditional E-value: 3.2e-09
                 BHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   4 TPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 ++LH A++ g+++ v  L ++GAdl  +d
  MMETSP1325-20131115|4229_1  80 SALHRACEGGHVNTVLVLMQNGADLLQRD 108
                 79***********************9998 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0023
                 TSCBHHHHHHHTT..HHHHHHHHHH CS
  PF00023.25   1 dGfTPLHlAalrg..nlevvklLls 23 
                 +G+TPL l ++    n+ev++ Ll 
  MMETSP1325-20131115|4229_1 110 NGRTPLDLTSQTRpaNYEVLEKLLT 134
                 7***********9999999999986 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.1   1.8e-13   4.9e-10       3      55 ..      63     117 ..      60     117 .. 0.88
   2 ?   -1.8   0.0       1.4   3.9e+03      28      37 ..     125     135 ..     124     140 .. 0.74

  Alignments for each domain:
  == domain 1    score: 39.2 bits;  conditional E-value: 1.8e-13
   PF13857.1   3 ehg.padvnatdeggn.tpLhlAakggalevvrlLlapgadlnlrdsdgltaldl 55 
                 +++ +a+ n+t  +++ ++Lh A++gg+++ v  L ++gadl  rd++g+t+ldl
  MMETSP1325-20131115|4229_1  63 KADiNAASNSTTDKSMkSALHRACEGGHVNTVLVLMQNGADLLQRDFNGRTPLDL 117
                 55666666777777778*************************************7 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.4
   PF13857.1  28 alevvrlLl.a 37 
                 + ev+++Ll +
  MMETSP1325-20131115|4229_1 125 NYEVLEKLLtM 135
                 67999999942 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.06   1.6e+02       9      30 .]      47      68 ..      44      68 .. 0.85
   2 !   16.1   0.0   3.1e-06    0.0085       4      28 ..      80     104 ..      77     106 .. 0.93
   3 !    5.7   0.0    0.0069        19       1      22 [.     110     133 ..     110     136 .. 0.80

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.06
   PF13606.1  9 AasngrielveaLlengadina 30
                Aa  g ++ v ++l + adina
  MMETSP1325-20131115|4229_1 47 AAGLGDTAQVMWCLAHKADINA 68
                7888888889999*******96 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 3.1e-06
   PF13606.1   4 TpLhlAasngrielveaLlengadi 28 
                 ++Lh A++ g+++ v  L +ngad+
  MMETSP1325-20131115|4229_1  80 SALHRACEGGHVNTVLVLMQNGADL 104
                 79**********************8 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.0069
   PF13606.1   1 nGnTpLhlAasng..rielveaLl 22 
                 nG+TpL+l  + +  ++e++e Ll
  MMETSP1325-20131115|4229_1 110 NGRTPLDLTSQTRpaNYEVLEKLL 133
                 89****9986644349****9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 642.04
//
Query:       MMETSP1325-20131115|4226_1  [L=1097]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-16   58.1  88.6    3.1e-05   23.3   6.4    9.6 10  PF07699.8 GCC2 and GCC3
     0.0078   15.8  65.1      0.029   13.9   1.7    9.2 10  PF07562.9 Nine Cysteines Domain of family 3 GPCR
  ------ inclusion threshold ------
        3.3    7.4  16.6       0.99    9.1   0.9    3.9  4  PF11143.3 Protein of unknown function (DUF2919)


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   2.9   2.6e-05      0.12      13      38 ..     105     130 ..     104     139 .. 0.85
   2 !    4.9   0.1    0.0037        17       1      20 [.     126     145 ..     126     149 .. 0.81
   3 !   23.3   6.4   6.8e-09   3.1e-05       1      48 []     142     189 ..     142     189 .. 0.94
   4 !   13.4   6.5   8.5e-06     0.039       1      38 [.     192     227 ..     192     237 .. 0.82
   5 !   12.8   4.0   1.3e-05     0.057       1      36 [.     240     274 ..     224     281 .. 0.85
   6 !   22.0   5.5   1.7e-08   7.7e-05       1      48 []     256     302 ..     256     302 .. 0.93
   7 !   20.5   4.7   5.2e-08   0.00024       1      43 [.     272     314 ..     272     319 .. 0.95
   8 !    9.5   3.6   0.00014      0.63       1      48 []     288     336 ..     288     336 .. 0.74
   9 ?    3.3   4.8     0.012        55       8      33 ..     350     375 ..     341     407 .. 0.65
  10 !    6.0   1.0    0.0017       7.6      10      33 ..     446     474 ..     435     480 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.6e-05
   PF07699.8  13 pCprGtYkneegqkkCiaCppgttTs 38 
                  C  G++ ++egq+ C aC  gt  +
  MMETSP1325-20131115|4226_1 105 FCAPGYFTDKEGQGRCSACEEGTMSL 130
                 6*******************997655 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0037
   PF07699.8   1 GtylkkgnkkCepCprGtYk 20 
                 Gt + + ++ C  C++GtY 
  MMETSP1325-20131115|4226_1 126 GTMSLADHSDCGQCGQGTYV 145
                 6777778899*********6 PP

  == domain 3    score: 23.3 bits;  conditional E-value: 6.8e-09
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttT.skkgsksesdC 48 
                 Gty  +g+  Ce Cp G Y ++++ ++C+ C +g +T  + g+++ s C
  MMETSP1325-20131115|4226_1 142 GTYVANGT-SCESCPFGRYAPTAQTDECLRCLSGFSTgVSSGATTCSSC 189
                 99997777.*************************9997889***99999 PP

  == domain 4    score: 13.4 bits;  conditional E-value: 8.5e-06
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTs 38 
                 Gty++    +C+ C+ GtY+ +++   C++C +g++ s
  MMETSP1325-20131115|4226_1 192 GTYSEGLAVNCTTCSSGTYSGSSSAS-CTMCDSGKF-S 227
                 9***9999************998877.******975.3 PP

  == domain 5    score: 12.8 bits;  conditional E-value: 1.3e-05
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgtt 36 
                 G y+ +g+ +C++C  GtY+n +   +C aC +gt+
  MMETSP1325-20131115|4226_1 240 GRYSAAGSRNCSACVGGTYSNPGAA-SCVACLSGTF 274
                 88999999***********987655.5****99954 PP

  == domain 6    score: 22.0 bits;  conditional E-value: 1.7e-08
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 Gty++ g   C +C  Gt+++  g  +Ci+C +g++ ++ g++s s+C
  MMETSP1325-20131115|4226_1 256 GTYSNPGAASCVACLSGTFSEM-GASSCIKCDSGRYSEHSGASSCSNC 302
                 9******************865.6667********************* PP

  == domain 7    score: 20.5 bits;  conditional E-value: 5.2e-08
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsk 43 
                 Gt+++ g + C+ C  G Y++ +g  +C +C +g++ s+ g++
  MMETSP1325-20131115|4226_1 272 GTFSEMGASSCIKCDSGRYSEHSGASSCSNCTKGRYSSSSGAS 314
                 99********************************999999986 PP

  == domain 8    score: 9.5 bits;  conditional E-value: 0.00014
   PF07699.8   1 Gtylkkgn.kkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 G y++++  + C+ C +G Y++++g   C a  +g +  ++g + e +C
  MMETSP1325-20131115|4226_1 288 GRYSEHSGaSSCSNCTKGRYSSSSGASACDAAAAGYFCPEQGLSAEYKC 336
                 66777444499******************98666666666665555555 PP

  == domain 9    score: 3.3 bits;  conditional E-value: 0.012
   PF07699.8   8 nkkCepCprGtYkneegqkkCiaCpp 33 
                 + +C +C+ G+Y +      C +C  
  MMETSP1325-20131115|4226_1 350 SDECALCEVGFYMDIKTPPRCHSCEN 375
                 369*********76666666666653 PP

  == domain 10    score: 6.0 bits;  conditional E-value: 0.0017
   PF07699.8  10 kCepCprGtY.....kneegqkkCiaCpp 33 
                  C+ C  G+Y     ++ +g   C  C  
  MMETSP1325-20131115|4226_1 446 ACSVCDMGYYetrraSEVQGGARCRDCAE 474
                 7*********6664435555559999976 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   1.6   0.00031       1.4       9      52 ..     106     143 ..     104     146 .. 0.83
   2 !    8.3   3.7   0.00037       1.7       8      52 ..     122     158 ..     119     161 .. 0.78
   3 !    7.6   0.6    0.0006       2.7      27      51 ..     150     174 ..     149     177 .. 0.92
   4 !    8.7   2.5   0.00027       1.2       9      54 .]     171     211 ..     170     211 .. 0.78
   5 !    8.4   2.2   0.00034       1.6      27      53 ..     201     226 ..     200     227 .. 0.88
   6 !    4.0   0.6    0.0078        35      27      53 ..     217     242 ..     216     243 .. 0.87
   7 !    6.7   2.1    0.0011       5.2      27      52 ..     249     273 ..     234     275 .. 0.80
   8 !   13.9   1.7   6.3e-06     0.029      27      54 .]     281     308 ..     280     309 .. 0.94
   9 ?    1.7   1.1     0.042   1.9e+02      27      50 ..     352     375 ..     351     378 .. 0.92
  10 ?    0.6   0.5     0.095   4.3e+02      28      53 ..     447     477 ..     446     480 .. 0.46

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00031
   PF07562.9   9 CkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeq 52 
                 C pG+   + +g+      C  C+eg++s   d  +C +C +++
  MMETSP1325-20131115|4226_1 106 CAPGYFTDK-EGQG----RCSACEEGTMSL-ADHSDCGQCGQGT 143
                 888887755.7777....89********99.7889*****9875 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00037
   PF07562.9   8 pCkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeq 52 
                  C++G++      ++    dC +C +g+++   + t+C++Cp ++
  MMETSP1325-20131115|4226_1 122 ACEEGTMSLA--DHS----DCGQCGQGTYVA--NGTSCESCPFGR 158
                 5888888855..333....8***********..7799****9876 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0006
   PF07562.9  27 dCvpCpegeisnetdettCkkCpee 51 
                 +C++Cp g +  + ++++C +C ++
  MMETSP1325-20131115|4226_1 150 SCESCPFGRYAPTAQTDECLRCLSG 174
                 5***********99********876 PP

  == domain 4    score: 8.7 bits;  conditional E-value: 0.00027
   PF07562.9   9 CkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeqws 54 
                 C  G+   v  g +    +C +C++g++s+   +++C++C+++++s
  MMETSP1325-20131115|4226_1 171 CLSGFSTGVSSGAT----TCSSCDAGTYSEG-LAVNCTTCSSGTYS 211
                 66666666666666....8**********94.589******98775 PP

  == domain 5    score: 8.4 bits;  conditional E-value: 0.00034
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C+ C+ g++s ++ + +C++C++++ 
  MMETSP1325-20131115|4226_1 201 NCTTCSSGTYSGSS-SASCTMCDSGKF 226
                 6***********66.88*****99876 PP

  == domain 6    score: 4.0 bits;  conditional E-value: 0.0078
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C+ C+ g++s   ++ +C +C  +++
  MMETSP1325-20131115|4226_1 217 SCTMCDSGKFSG-GGAASCDSCAGGRY 242
                 5*********99.7799*****87765 PP

  == domain 7    score: 6.7 bits;  conditional E-value: 0.0011
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeq 52 
                 +C  C  g++sn  ++ +C++C +++
  MMETSP1325-20131115|4226_1 249 NCSACVGGTYSN-PGAASCVACLSGT 273
                 6999******99.88999***98876 PP

  == domain 8    score: 13.9 bits;  conditional E-value: 6.3e-06
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqws 54 
                 +C++C+ g +s+++++ +C +C+++++s
  MMETSP1325-20131115|4226_1 281 SCIKCDSGRYSEHSGASSCSNCTKGRYS 308
                 5**********************99775 PP

  == domain 9    score: 1.7 bits;  conditional E-value: 0.042
   PF07562.9  27 dCvpCpegeisnetdettCkkCpe 50 
                 +C  C+ g + + +    C++C++
  MMETSP1325-20131115|4226_1 352 ECALCEVGFYMDIKTPPRCHSCEN 375
                 6999********99999*****85 PP

  == domain 10    score: 0.6 bits;  conditional E-value: 0.095
   PF07562.9  28 CvpCpegeisnet.det....tCkkCpeeqw 53 
                 C  C+ g + +++  e+     C++C ee+ 
  MMETSP1325-20131115|4226_1 447 CSVCDMGYYETRRaSEVqggaRCRDCAEEEL 477
                 5555555554443222212225666666654 PP

>> PF11143.3  Protein of unknown function (DUF2919)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.3     0.065     3e+02      61     113 ..     488     540 ..     482     547 .. 0.80
   2 ?   -0.8   0.2      0.23   1.1e+03      56      96 ..     587     623 ..     577     639 .. 0.61
   3 ?    9.1   0.9   0.00022      0.99      54     107 ..     767     819 ..     759     824 .. 0.81
   4 ?    6.0   0.1    0.0019       8.8      54     103 ..     826     876 ..     818     882 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.065
   PF11143.3  61 aigvpalllllligrrkksrkwlrklwrylrwllllllvvdlvllllrlalqh 113
                 +++++ +l +ll+  +k   +w+++ +r+l  l   ++v+ +++++l l+ q+
  MMETSP1325-20131115|4226_1 488 LVAAIIMLGYLLCKYKKTFLRWMHENRRSLNVLGDTTTVLWVTMQTLVLVVQN 540
                 5677888999*************999999999988888888888777666655 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.23
   PF11143.3  56 fylgLaigvpalllllligrrkksrkwlrklwrylrwllll 96 
                 ++  L++   a+++ l+++ r+k++      w+ l+ ++++
  MMETSP1325-20131115|4226_1 587 LMTTLLCITCAMMAGLIYLVRRKDEG----AWKILKRVVWV 623
                 55566666667776666665555555....34444444443 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.00022
   PF11143.3  54 ssfylgLaigvpallll.lligrrkksrkwlrklwrylrwllllllvvdlvllll 107
                 +s++l  ++ ++a+l+l +    r+++++ ++++++++ w +ll+++v l++ ++
  MMETSP1325-20131115|4226_1 767 ESLVL--FSLCIAILFLlFHTQARPHDNDVMDNIVAMMHWQTLLAIIVLLIMDAQ 819
                 55554..77788999996778889999999999***************9998766 PP

  == domain 4    score: 6.0 bits;  conditional E-value: 0.0019
   PF11143.3  54 ssfylgLaigvpallll.lligrrkksrkwlrklwrylrwllllllvvdlv 103
                 +s++ g ++gv  l+l+ l+i+  ++ r++lr ++++ + +l  ++vv+  
  MMETSP1325-20131115|4226_1 826 TSLLGGVLAGVNTLMLMmLFIPVIPQMRETLRDVVKSAKHTLFPTQVVKGD 876
                 5788899*********99***************************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1097 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       720  (0.0526624); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.75u 0.39s 00:00:02.14 Elapsed: 00:00:00.84
# Mc/sec: 3129.53
//
Query:       MMETSP1325-20131115|4230_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 465.18
//
Query:       MMETSP1325-20131115|4228_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.6    7.7   9.7        1.9    7.4   6.7    1.2  1  PF02601.10 Exonuclease VII, large subunit
        4.1    7.3  14.1        1.6    8.6   1.4    2.4  2  PF07334.8  Interferon-induced 35 kDa protein (IFP 35) N-terminus
        6.1    6.4  15.4        8.9    5.9  10.7    1.2  1  PF05279.6  Aspartyl beta-hydroxylase N-terminal region


Domain annotation for each model (and alignments):
>> PF02601.10  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   6.7   0.00042       1.9     156     243 ..       5      97 ..       1     200 [. 0.54

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00042
  PF02601.10 156 eqrlsralksklekekaklnllknrltlksrrkplskleqeeerleelkerlek....sleqllqskesqleklnaslaknnpdyklnkkl.e 243
                 +++l+  + ++  +++akl+ ++++++++  +  ++ ++++++ l+++ke+ +k    +leq+ ++k+++l+   +++++ +++++ + k+ +
  MMETSP1325-20131115|4228_1   5 QAQLQAEIVKQEAEYQAKLEAADETKQKEMVSLFERDMKRHRDSLTQQKETNRKklqaKLEQRKRKKQAELDAKLEKMQADSVEEIASIKSdA 97 
                 555555555555666666666666666666555556666666666666665555333344444444445555444444444444444433321 PP

>> PF07334.8  Interferon-induced 35 kDa protein (IFP 35) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   3.1      0.01        46       6      26 ..       2      22 ..       1      34 [. 0.87
   2 ?    8.6   1.4   0.00036       1.6      14      49 ..      55      90 ..      47     109 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.01
   PF07334.8  6 qkenirLkeeiqkLeaELQel 26
                ++++++L+ ei k eaE Q +
  MMETSP1325-20131115|4228_1  2 EQKQAQLQAEIVKQEAEYQAK 22
                689***************975 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00036
   PF07334.8 14 eeiqkLeaELQelkrefqikediPetKikftsvEvP 49
                ++ +kL a L + kr+ q   d+  +K++  svE  
  MMETSP1325-20131115|4228_1 55 TNRKKLQAKLEQRKRKKQAELDAKLEKMQADSVEEI 90
                4558999*************************9975 PP

>> PF05279.6  Aspartyl beta-hydroxylase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  10.7     0.002       8.9     144     233 ..       2      92 ..       1     100 [. 0.76

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.002
   PF05279.6 144 derqeeleagkvkeevEeslkveetvseeakkdmkekasee.enekskepveeaekekaeakeveeedkeeeaeedekveeskai.eeelae 233
                 +++q++l+a+ vk+e+E ++k e + + ++k+ m+   +++ + +  + + +++++ k+ + ++e+++++++ae d+k+e+ +a  +ee+a 
  MMETSP1325-20131115|4228_1   2 EQKQAQLQAEIVKQEAEYQAKLEAADETKQKE-MVSLFERDmKRHRDSLTQQKETNRKKLQAKLEQRKRKKQAELDAKLEKMQADsVEEIAS 92 
                 688999***************99887776666.66665555155566677779999999999**********99999999987641455544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2248  (0.164424); expected 273.4 (0.02)
Passed bias filter:                      806  (0.0589526); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.79u 0.40s 00:00:01.19 Elapsed: 00:00:00.74
# Mc/sec: 803.10
//
Query:       MMETSP1325-20131115|4231_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 892.26
//
Query:       MMETSP1325-20131115|4232_1  [L=437]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   14.3   0.0       0.43   11.0   0.0    2.3  2  PF12681.2 Glyoxalase-like domain


Domain annotation for each model (and alignments):
>> PF12681.2  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.063   8.6e+02      53      85 ..     149     181 ..      72     197 .. 0.72
   2 ?   11.0   0.0   3.2e-05      0.43       3      77 ..     263     338 ..     262     353 .. 0.71

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.063
   PF12681.2  53 pggggvhlafevedldalvarlkaaGakvlgep 85 
                 ++   +++ + +++ld+++ +l a  +++l++ 
  MMETSP1325-20131115|4232_1 149 DAFMDYSVGLYTTNLDQYITALDADSVDYLTST 181
                 334447778888999999999998888887754 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 3.2e-05
   PF12681.2   3 vsdleaaraFYeklLGfevae....eegdfvtlslglalgsgvrellgldepeapggggvhlafevedldalvarlkaa 77 
                 ++dl+a   FY++++G +++     ++ +  ++++++   s+v+ +++++ +e+ +++ +++a + +  +a++a l+a+
  MMETSP1325-20131115|4232_1 263 TADLDAIDTFYQDAMGATLDIdattDHFERHCFKYSS--SSTVDICFTKR-DESATSSDFSVADMEAQMNAVHANLLAN 338
                 78*******************5433333334444433..37788888864.4566667677776667777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.38s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 2053.35
//
Query:       MMETSP1325-20131115|4233_1  [L=435]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-67  227.1   2.7    2.8e-67  226.6   1.9    1.2  1  PF00112.18 Papain family cysteine protease
      0.002   18.2   0.0     0.0034   17.5   0.0    1.4  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)
     0.0022   16.4   0.1       0.14   10.5   0.0    2.1  2  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.6   1.9   6.2e-71   2.8e-67       1     218 [.     123     341 ..     123     343 .. 0.92

  Alignments for each domain:
  == domain 1    score: 226.6 bits;  conditional E-value: 6.2e-71
                 -TSB--CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-TTTS-.....TT----HHHHHHHHHHC---BBTTTS---SSC-...S--CCCC--C.CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSS..SGGGTTSSEEE CS
  PF00112.18   1 lpesvDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCskeene.....gCnGGlmenafeyikknggivtekdypYkakeg..gkCkkkkkkekevakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygvengkkyWivkNSWgtdwGekGYiriargkn..necgieseavy 218
                 lp+svDwre+ g +tpvk+qg CGsCWafs ++ale+++ai+t ++l++lSeqe v+C ++ +e     gC+G +me  f+++++ +gi+te +ypY++  g  g+C+++ +   +va+i+gy+++++n+ e+l++a+a++gPv++++das++  ++Y+sG+y++ + +s el+h+v++vGyg+e+gk+yW+v+NSWg +wGe+GYir+ar  +    cg+++++ +
  MMETSP1325-20131115|4233_1 123 LPDSVDWRES-GVITPVKNQGGCGSCWAFSGTEALESHIAIAT-GTLFTLSEQEYVSCVENPDEcggtgGCSGATMELLFQHAVD-NGIATEWTYPYTSYYGdsGNCSSSLT---SVATISGYKMIESNNYEELMEAVATVGPVAITVDASTW--SSYTSGIYDGCNQESPELDHGVQLVGYGSEDGKDYWLVRNSWGPTWGENGYIRLARTADeaALCGVDTDPAM 341
                 69*******7.59******************************.7*************99555578999***************9.9***********55543378887754...369**********************************5..9*********877778****************************************9887789999988765 PP

>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   7.4e-07    0.0034       1      57 [.      33      89 ..      33      90 .. 0.95

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 7.4e-07
   PF08246.7  1 FeswmdaygkkY.rhsseinerfenFkeNlrqiqehNanknvtftlglNkfsDlsheE 57
                F +++++++k Y   sse ++r+++F+  l+ i + N +   + + g+N + Dl  eE
  MMETSP1325-20131115|4233_1 33 FAEYVADFKKGYvPGSSEWKSRQAIFEAALEAIITTN-KAGLSWRAGVNDMTDLRAEE 89
                899*********77799********************.****************9999 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.7   0.0    0.0036        16      57      80 ..     137     160 ..     130     177 .. 0.81
   2 !   10.5   0.0     3e-05      0.14     357     396 ..     285     322 ..     278     327 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0036
  PF03051.10  57 evtnqkqsGRCWlFaalnvlRlkl 80 
                 +v nq   G CW F+ + +l  ++
  MMETSP1325-20131115|4233_1 137 PVKNQGGCGSCWAFSGTEALESHI 160
                 799************999887665 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 3e-05
  PF03051.10 357 slmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfv 396
                  +++H + l+g     ++    w v nsWG   Ge+Gy  
  MMETSP1325-20131115|4233_1 285 PELDHGVQLVGYGS--EDGKDYWLVRNSWGPTWGENGYIR 322
                 57899999999988..344567****************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.34s 00:00:01.06 Elapsed: 00:00:00.60
# Mc/sec: 1737.36
//
Query:       MMETSP1325-20131115|4236_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-41  138.5   0.5    9.2e-20   70.0   0.0    2.3  3  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.57   7.7e+03      79      92 ..       6      19 ..       4      21 .. 0.72
   2 !   66.8   0.0   6.7e-23   9.2e-19       5      92 ..      35     124 ..      31     126 .. 0.91
   3 !   70.0   0.0   6.7e-24   9.2e-20       6      92 ..     136     221 ..     131     225 .] 0.94

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.57
                HHHHHHHHHHHHHH CS
  PF00153.22 79 aikfvtyetlkkll 92
                +i+f++y  + + l
  MMETSP1325-20131115|4236_1  6 SITFGSYGNCLDAL 19
                78899998877666 PP

  == domain 2    score: 66.8 bits;  conditional E-value: 6.7e-23
                 HHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---...GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   5 vlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGi...rglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                 ++  ++ G+++g++ ++v++P d+vK+++q  a+s+++++kg++d+ k i+ +eG+   +gl+rG++++ lr+vp  + +  +ye +kk+ 
  MMETSP1325-20131115|4236_1  35 LIDLFIGGCVGGLACTVVMAPSDRVKVQMQ-LAKSEGKPFKGVIDCAKFIINKEGVftkTGLFRGWSATALRDVPGMSGYYIVYELVKKYW 124
                 556688899999999***************.99**********************76669****************************986 PP

  == domain 3    score: 70.0 bits;  conditional E-value: 6.7e-24
                 HHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   6 lksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                 l++l+aG++Ag +++l ++P+dv+K r q ++a+ ++ y+++ +a  +++k+eG+  +y+G+ p+l++ +p ++  f++ye   + +
  MMETSP1325-20131115|4236_1 136 LQNLTAGGLAGQVSWLPVYPMDVIKSRYQ-ARAGTANAYTSLSHAAMTMLKTEGPFIFYKGFAPTLVQAFPLHGSVFMVYELWLRAF 221
                 799**************************.999999*********************************************877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 1123.29
//
Query:       MMETSP1325-20131115|4235_1  [L=541]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-13   48.5   0.8    5.9e-05   22.4   0.0    5.4  5  PF12799.2  Leucine Rich repeats (2 copies)
    2.6e-10   39.8   8.8    0.00012   21.6   0.1    4.4  4  PF13855.1  Leucine rich repeat
    6.9e-07   28.5   1.3        4.7    7.4   0.0    5.8  5  PF13516.1  Leucine Rich repeat
    1.1e-05   24.6   6.4         14    6.1   0.0    7.0  7  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.025   14.1   0.2       0.29   10.7   0.1    2.6  2  PF13306.1  Leucine rich repeats (6 copies)
      0.042   13.9   5.7         31    5.2   0.0    5.5  5  PF13504.1  Leucine rich repeat
      0.064   12.7   0.9         39    3.7   0.1    4.3  4  PF07873.6  YabP family


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.037        73      24      34 ..     289     299 ..     267     311 .. 0.67
   2 !   22.4   0.0     3e-08   5.9e-05       2      42 ..     314     355 ..     313     357 .. 0.89
   3 !    5.6   0.0    0.0055        11       3      37 ..     385     420 ..     383     429 .. 0.90
   4 !    9.8   0.0   0.00027      0.53       2      27 ..     431     456 ..     430     457 .. 0.91
   5 ?    0.5   0.0      0.22   4.3e+02      16      34 ..     472     489 ..     459     501 .. 0.73

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.037
   PF12799.2  24 pnLktLnLsnN 34 
                 +nL+tL+L  +
  MMETSP1325-20131115|4235_1 289 RNLRTLDLHKC 299
                 46777777655 PP

  == domain 2    score: 22.4 bits;  conditional E-value: 3e-08
   PF12799.2   2 nLevLdLsnNnIk.dlppelanLpnLktLnLsnNpis.dlsaL 42 
                  Le L+Ls++++  d+++ l +L+ L++L+Ls  +++ d+s++
  MMETSP1325-20131115|4235_1 314 RLERLNLSQSSVVgDISA-LEQLTHLTSLDLSEMKLEgDISVF 355
                 59*******99765****.***************997688875 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.0055
   PF12799.2   3 LevLdLsnNnIkd..lppelanLpnLktLnLsnNpis 37 
                 L+vL+L +++  d  ++  l+++ +L  L L++++++
  MMETSP1325-20131115|4235_1 385 LQVLSLVSCSMVDghISV-LSSCEQLVKLQLESTKVT 420
                 9*********99888**9.*************99986 PP

  == domain 4    score: 9.8 bits;  conditional E-value: 0.00027
   PF12799.2   2 nLevLdLsnNnIk.dlppelanLpnLk 27 
                 + ++L+L++++Ik d+ + l+ +++L 
  MMETSP1325-20131115|4235_1 431 KIQHLNLRETKIKgDIAH-LGACQDLH 456
                 789**********99***.*9999986 PP

  == domain 5    score: 0.5 bits;  conditional E-value: 0.22
   PF12799.2  16 lppelanLpnLktLnLsnN 34 
                 l++ ++++ +L+++nL  +
  MMETSP1325-20131115|4235_1 472 LEA-FKQCFQLREINLKQC 489
                 667.8999999**999877 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   1.1   1.5e-06    0.0029       1      57 [.     289     344 ..     289     348 .. 0.81
   2 !   14.7   0.3   8.8e-06     0.017       2      38 ..     314     349 ..     313     363 .. 0.75
   3 !   21.6   0.1   5.9e-08   0.00012       2      61 .]     384     442 ..     383     442 .. 0.93
   4 ?    1.9   0.0     0.084   1.6e+02      43      58 ..     473     488 ..     464     492 .. 0.77

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.5e-06
   PF13855.1   1 pnLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnnl.ksispeafkgLpsLreLnLs 57 
                 +nL++LdL ++ ++  ++   a++   +L+ L+Ls  +    is  a+++L++L++L+Ls
  MMETSP1325-20131115|4235_1 289 RNLRTLDLHKCfKIGgEL--AALQEAARLERLNLSQSSVvGDIS--ALEQLTHLTSLDLS 344
                 59*********5555444..59*************777745666..7************8 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 8.8e-06
   PF13855.1   2 nLkeLdLsnNrlkvipd.gaFkglsnLkvLdLsgnnlk 38 
                 +L++L+Ls++  +v++d +a+++l++L++LdLs+ +l+
  MMETSP1325-20131115|4235_1 314 RLERLNLSQS--SVVGDiSALEQLTHLTSLDLSEMKLE 349
                 7999****98..55544469************998885 PP

  == domain 3    score: 21.6 bits;  conditional E-value: 5.9e-08
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                  L++L L ++++ + + +++++++ L +L L +++ +    ++f++L+++++LnL+ +++
  MMETSP1325-20131115|4235_1 384 GLQVLSLVSCSMVDGHISVLSSCEQLVKLQLESTKVTGTT-DVFAKLRKIQHLNLRETKI 442
                 799**********9999***************99998886.5*************98876 PP

  == domain 4    score: 1.9 bits;  conditional E-value: 0.084
   PF13855.1  43 eafkgLpsLreLnLsg 58 
                 eafk++ +Lre+nL++
  MMETSP1325-20131115|4235_1 473 EAFKQCFQLREINLKQ 488
                 5777777888888765 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0024       4.7       2      19 ..     289     307 ..     288     311 .. 0.83
   2 ?    1.3   0.0      0.24   4.6e+02       4      17 ..     315     329 ..     313     334 .. 0.76
   3 !    7.4   0.0    0.0025       4.8       1      17 [.     335     351 ..     335     359 .. 0.83
   4 ?   -1.0   0.0       1.3   2.5e+03       1      15 [.     406     420 ..     406     423 .. 0.87
   5 ?    5.0   0.0     0.015        30       2      19 ..     430     447 ..     429     455 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0024
   PF13516.1   2 knLtsLdLsnN.qigdeGl 19 
                  nL++LdL ++ +ig+e +
  MMETSP1325-20131115|4235_1 289 RNLRTLDLHKCfKIGGELA 307
                 69*********55999865 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.24
   PF13516.1   4 LtsLdLsnNq.igde 17 
                 L+ L+Ls+   +gd+
  MMETSP1325-20131115|4235_1 315 LERLNLSQSSvVGDI 329
                 99*****97756775 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0025
   PF13516.1   1 lknLtsLdLsnNqigde 17 
                 l++LtsLdLs  ++ ++
  MMETSP1325-20131115|4235_1 335 LTHLTSLDLSEMKLEGD 351
                 689*******9999665 PP

  == domain 4    score: -1.0 bits;  conditional E-value: 1.3
   PF13516.1   1 lknLtsLdLsnNqig 15 
                 + +L  L+L +++++
  MMETSP1325-20131115|4235_1 406 CEQLVKLQLESTKVT 420
                 78999*****99987 PP

  == domain 5    score: 5.0 bits;  conditional E-value: 0.015
   PF13516.1   2 knLtsLdLsnNqigdeGl 19 
                  ++++L+L  ++i ++ +
  MMETSP1325-20131115|4235_1 430 RKIQHLNLRETKIKGDIA 447
                 689*********988765 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       6.6   1.3e+04       3      11 ..     267     275 ..     267     281 .. 0.77
   2 ?    3.8   0.0     0.039        75       1      13 [.     290     303 ..     290     311 .. 0.82
   3 ?    3.8   0.0     0.039        76       1      21 [.     314     334 ..     314     335 .. 0.81
   4 !    6.1   0.0     0.007        14       1      22 []     337     358 ..     337     358 .. 0.93
   5 ?    1.5   0.0      0.22   4.2e+02       2      21 ..     385     405 ..     384     415 .. 0.75
   6 ?    3.2   0.0      0.06   1.2e+02       1      19 [.     431     449 ..     431     453 .. 0.82
   7 ?    2.4   0.0      0.11   2.2e+02       1      15 [.     480     496 ..     480     501 .. 0.80

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 6.6
                 SEEEETSSB CS
  PF00560.28   3 eeLdLsgNn 11 
                 e+L L g+n
  MMETSP1325-20131115|4235_1 267 ETLLLTGCN 275
                 679999994 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.039
                 TESEEEETSS.BCB CS
  PF00560.28   1 nLeeLdLsgN.nlt 13 
                 nL++LdL  + ++ 
  MMETSP1325-20131115|4235_1 290 NLRTLDLHKCfKIG 303
                 8********98876 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.039
                 TESEEEETSSBCB.CHHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnlt.slppslsn 21 
                 +Le+L+Ls  ++  +++  l++
  MMETSP1325-20131115|4235_1 314 RLERLNLSQSSVVgDISA-LEQ 334
                 59*******988888887.665 PP

  == domain 4    score: 6.1 bits;  conditional E-value: 0.007
                 TESEEEETSSBCB.CHHHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnlt.slppslsnL 22 
                 +L++LdLs  +l+ +++  +++L
  MMETSP1325-20131115|4235_1 337 HLTSLDLSEMKLEgDISV-FGHL 358
                 79***************9.9987 PP

  == domain 5    score: 1.5 bits;  conditional E-value: 0.22
                 ESEEEETSSBCBC..HHHHHHH CS
  PF00560.28   2 LeeLdLsgNnlts..lppslsn 21 
                 L++L+L ++++ +  ++  ls+
  MMETSP1325-20131115|4235_1 385 LQVLSLVSCSMVDghISV-LSS 405
                 899999999776645554.554 PP

  == domain 6    score: 3.2 bits;  conditional E-value: 0.06
                 TESEEEETSSBCB.CHHHHH CS
  PF00560.28   1 nLeeLdLsgNnlt.slppsl 19 
                 ++++L+L+ ++++ ++ + l
  MMETSP1325-20131115|4235_1 431 KIQHLNLRETKIKgDIAH-L 449
                 589*******99988876.5 PP

  == domain 7    score: 2.4 bits;  conditional E-value: 0.11
                 TESEEEETSS.BCB.CH CS
  PF00560.28   1 nLeeLdLsgN.nlt.sl 15 
                 +L+e++L  + +l+ s 
  MMETSP1325-20131115|4235_1 480 QLREINLKQCfRLEgSM 496
                 69********9998665 PP

>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.87   1.7e+03      55      89 ..     310     344 ..     286     361 .. 0.59
   2 ?   10.7   0.1   0.00015      0.29      30     111 ..     402     487 ..     375     495 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.87
   PF13306.1  55 sncssltsitipssltsigenaFsncsslksinip 89 
                 ++   l+ +++++s    + +a ++ ++l+s++++
  MMETSP1325-20131115|4235_1 310 QEAARLERLNLSQSSVVGDISALEQLTHLTSLDLS 344
                 34444555555555555555555555555555554 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00015
   PF13306.1  30 aFsncsslksitlpsslteigeyaFsncssltsitipssltsigenaFsncsslksinipss.lttigs..saFsnc.slksitip 111
                 + s+c++l +++l+s+  +  + +F++ ++++++++ ++  + +      c+ l++  +       +g+  +aF++c +l++i+++
  MMETSP1325-20131115|4235_1 402 VLSSCEQLVKLQLESTKVTGTTDVFAKLRKIQHLNLRETKIKGDIAHLGACQDLHTAILDARdSALVGNvlEAFKQCfQLREINLK 487
                 45778888888888888888888888888888888888777888888888888888888654233333322578888888888875 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.016        31       2      11 ..     290     299 ..     289     307 .. 0.84
   2 ?   -0.1   0.0      0.89   1.7e+03       2      12 ..     314     324 ..     313     334 .. 0.82
   3 ?    3.8   0.0     0.046        90       1      14 [.     336     349 ..     336     353 .. 0.85
   4 ?    2.0   0.1      0.19   3.7e+02       2      13 ..     384     395 ..     383     414 .. 0.81
   5 ?   -3.5   0.0         7   1.4e+04       3      11 ..     481     489 ..     480     493 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.016
   PF13504.1   2 nLkeLdLsgn 11 
                 nL++LdL+ +
  MMETSP1325-20131115|4235_1 290 NLRTLDLHKC 299
                 9*******99 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.89
   PF13504.1   2 nLkeLdLsgnr 12 
                 +L++L+Ls  +
  MMETSP1325-20131115|4235_1 314 RLERLNLSQSS 324
                 799****9876 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.046
   PF13504.1   1 pnLkeLdLsgnrLt 14 
                 ++L+ LdLs  +L+
  MMETSP1325-20131115|4235_1 336 THLTSLDLSEMKLE 349
                 79*******88875 PP

  == domain 4    score: 2.0 bits;  conditional E-value: 0.19
   PF13504.1   2 nLkeLdLsgnrL 13 
                  L++L+L +++ 
  MMETSP1325-20131115|4235_1 384 GLQVLSLVSCSM 395
                 699****99874 PP

  == domain 5    score: -3.5 bits;  conditional E-value: 7
   PF13504.1   3 LkeLdLsgn 11 
                 L+e +L  +
  MMETSP1325-20131115|4235_1 481 LREINLKQC 489
                 888888888 PP

>> PF07873.6  YabP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       0.2   3.9e+02      38      63 ..     283     309 ..     276     310 .. 0.86
   2 ?    2.4   0.0     0.053     1e+02      45      61 ..     337     353 ..     334     355 .. 0.91
   3 ?    3.7   0.1      0.02        39      14      62 ..     396     448 ..     393     450 .. 0.64
   4 ?   -1.5   0.0      0.86   1.7e+03      43      63 ..     478     499 ..     477     500 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.2
                 EEE-------SSSS--.EEE-----EE CS
   PF07873.6  38 iIkGenLkikklnlee.lvieGkIksl 63 
                 +I+G+  ++++l+l +  +i G++ +l
  MMETSP1325-20131115|4235_1 283 SITGSARNLRTLDLHKcFKIGGELAAL 309
                 79999999**************98776 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.053
                 ---SSSS--EEE----- CS
   PF07873.6  45 kikklnleelvieGkIk 61 
                 ++++l+l+e+++eG I+
  MMETSP1325-20131115|4235_1 337 HLTSLDLSEMKLEGDIS 353
                 7899***********96 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.02
                 E----EEEEEETTEEEEE-----EE....EE-------SSSS--EEE-----E CS
   PF07873.6  14 ienvkgvlsfdeeeirletkkgkli....IkGenLkikklnleelvieGkIks 62 
                 ++++ +vls  e+ ++l++++ k++    +  +  ki++lnl e +i+G I  
  MMETSP1325-20131115|4235_1 396 VDGHISVLSSCEQLVKLQLESTKVTgttdVFAKLRKIQHLNLRETKIKGDIAH 448
                 56666666666666666666554431111333333799999999999999976 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 0.86
                 -----SSSS--.EEE-----EE CS
   PF07873.6  43 nLkikklnlee.lvieGkIksl 63 
                 +++++++nl++   +eG +++l
  MMETSP1325-20131115|4235_1 478 CFQLREINLKQcFRLEGSMEEL 499
                 6899999*999999***99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.87u 0.34s 00:00:01.21 Elapsed: 00:00:00.52
# Mc/sec: 2493.13
//
Query:       MMETSP1325-20131115|4237_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.2e-09   36.6   0.3    2.5e-09   36.4   0.2    1.1  1  PF06454.6 Protein of unknown function (DUF1084)


Domain annotation for each model (and alignments):
>> PF06454.6  Protein of unknown function (DUF1084)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.2   1.8e-13   2.5e-09      61     144 ..      36     122 ..       3     124 .. 0.82

  Alignments for each domain:
  == domain 1    score: 36.4 bits;  conditional E-value: 1.8e-13
   PF06454.6  61 qkvfhllnflvngvRavvfvvr...kevfklkpkvle.aillDlpglaffstyalLvLfWaeiyyqaRaletdklrpafyavngvvyv 144
                    fh l++l n+ R v+ +++    +   + p +l  + +  +p l f+sty+lL LfWa++ yq  +++  +lr+ f+  n+++y 
  MMETSP1325-20131115|4237_1  36 RMWFHGLLLLGNSTRGVAVGIElvlWQAG-MCPSSLAcTQVRVFPNLFFLSTYSLLTLFWAQLTYQVMNVQFLHLRALFFGGNALLYT 122
                 55699999999999999888883333333.4455555489999****************************************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|4238_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 649.01
//
Query:       MMETSP1325-20131115|4239_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.042   13.4   0.0      0.084   12.5   0.0    1.4  1  PF07498.7 Rho termination factor, N-terminal domain


Domain annotation for each model (and alignments):
>> PF07498.7  Rho termination factor, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.2e-06     0.084      21      40 ..      23      42 ..      22      44 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.2e-06
   PF07498.7 21 nysrlrKqeLIfaILkaqae 40
                ++s ++K+e++  I+k  +e
  MMETSP1325-20131115|4239_1 23 GASAMTKSEIVDMIIKHNSE 42
                89**************8776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       921  (0.067364); expected 273.4 (0.02)
Passed bias filter:                      756  (0.0552955); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.59
# Mc/sec: 300.56
//
Query:       MMETSP1325-20131115|4234_1  [L=594]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       579  (0.0423493); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.96u 0.38s 00:00:01.34 Elapsed: 00:00:00.66
# Mc/sec: 2156.72
//
Query:       MMETSP1325-20131115|4240_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 732.73
//
Query:       MMETSP1325-20131115|4242_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|4241_1  [L=339]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.53
# Mc/sec: 1532.76
//
Query:       MMETSP1325-20131115|4243_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       581  (0.0424956); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|4244_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 420.41
//
Query:       MMETSP1325-20131115|4245_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-61  206.8  27.7    2.3e-61  206.4  19.2    1.2  1  PF13851.1  Growth-arrest specific micro-tubule binding
     0.0085   14.2  24.5       0.02   12.9  16.5    1.8  1  PF06160.7  Septation ring formation regulator, EzrA
  ------ inclusion threshold ------
        1.4    7.8  28.7         17    4.3  19.9    2.3  1  PF09728.4  Myosin-like coiled-coil protein
          2    7.9   7.9       0.48   10.0   1.3    2.2  2  PF03135.9  CagE, TrbE, VirB family, component of type IV transporter system
          5    6.9  15.9        5.7    6.7   0.8    3.8  3  PF06103.6  Bacterial protein of unknown function (DUF948)
          6    5.5  26.1       0.27    9.9  11.2    2.4  3  PF04111.7  Autophagy protein Apg6
        7.7    5.9   8.8        1.8    8.0   1.9    2.4  2  PF04120.7  Low affinity iron permease
        9.2    3.8  19.1         19    2.7  11.9    2.2  1  PF01496.14 V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.4  19.2   1.3e-64   2.3e-61       7     201 .]       2     196 ..       1     196 [. 0.99

  Alignments for each domain:
  == domain 1    score: 206.4 bits;  conditional E-value: 1.3e-64
   PF13851.1   7 HekafeeiKnYYnditknnLelIkslkeeiaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErdelykkfeaaiqdvqqktelknllLekKlealneelekkeaqLeevlaaanldpaaleavsekledvleeKnqeIkdL 201
                 H+kaf+eiKnYYndit+nnL+lIkslkee++e++kke  +ek+m+ i++en r++ep ++a+++ve+L+ +l+ y+ +k++L+++ka+l   e+e ++lkwe+ev   rf++v+  rd+l +kf+a+++++qqk++++nl+LekK ++l+e l  keaqL+evla+anl+  ++ +++ k++d+l++Knq + dL
  MMETSP1325-20131115|4245_1   2 HKKAFAEIKNYYNDITHNNLDLIKSLKEEVEEMRKKEHLDEKQMQHISQENTRMNEPFRQAKQDVENLRAELDRYNWEKEELRSTKARLLVVEDEQRQLKWEYEVAALRFDEVKAQRDKLAEKFQATVYETQQKSGFRNLILEKKYSSLQEVLQAKEAQLNEVLARANLESGSAGNMRTKVDDLLQKKNQAVLDL 196
                 **********************************************************************************************************************************************************************************************99877 PP

>> PF06160.7  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9  16.5   1.2e-05      0.02     310     492 ..       8     204 ..       2     210 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.2e-05
   PF06160.7 310 klkeklehakeqn....keLkeelerlkqsYtLnekelekvrelekqleelekqleeleekiaekkaaYSelqeeleeiekqleeiekeqeels..eelqsLrkeekeArek..lkelkkklseikRkleksnLPGlPedylelfeevsdeieklakeLeevri......nme.evnkqleeaeedvetlkekteelv 492
                 ++k++ + ++++n    k+Lkee+e+++++ +L+ek++++ ++ +++++e  +q ++++e+++++  +Y   +eel++++ +l  +e+eq++l+   e+++Lr +e +A+++  +++++ +++e++ k   +nL  l ++y +l e+ +++  +l++ L +  +      nm  +v++ l++ +++v +l+ + e++v
  MMETSP1325-20131115|4245_1   8 EIKNYYNDITHNNldliKSLKEEVEEMRKKEHLDEKQMQHISQENTRMNEPFRQAKQDVENLRAELDRYNWEKEELRSTKARLLVVEDEQRQLKweYEVAALRFDEVKAQRDklAEKFQATVYETQQKSGFRNLI-LEKKYSSLQEVLQAKEAQLNEVLARANLesgsagNMRtKVDDLLQKKNQAVLDLQAEVERVV 204
                 55555555555553334889*********************************************************************998863268***********86433789**********99999995.89999999999999999999999998884444445532566666666666666666666665 PP

>> PF09728.4  Myosin-like coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  19.9    0.0097        17      12     169 ..      19     172 ..      10     221 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0097
   PF09728.4  12 kslskldspeekletlikklaellkeskrlkkelkklkkkleqlqkekdklqselskaalakskLekL.CRel..qkenkklk...eEnkkrikeeeekrkeltekfqstLkdiqaqleeksnknkklleeneeLreKlkelieqyelreehlekllktkelel 169
                 ++l+ ++s++e++e + kk    +k++++ ++e+  ++  + q++++ ++l++el++ +  k++L +   R l    e+++lk   e ++ r++e + +r +l+ekfq+t+++ q+          k+   n  L++K ++l+e  + +e +l+++l   +le 
  MMETSP1325-20131115|4245_1  19 NNLDLIKSLKEEVEEMRKKEHLDEKQMQHISQENTRMNEPFRQAKQDVENLRAELDRYNWEKEELRSTkARLLvvEDEQRQLKweyEVAALRFDEVKAQRDKLAEKFQATVYETQQ----------KSGFRNLILEKKYSSLQEVLQAKEAQLNEVLARANLES 172
                 66777888999999999999999999999999999999999999999999999999999999999875233222244556666443778899******************998765..........45566788888888888888888888888888877775 PP

>> PF03135.9  CagE, TrbE, VirB family, component of type IV transporter system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.3   0.00028      0.48      67     165 ..       5     102 ..       2     113 .. 0.92
   2 ?    1.5   0.3      0.11     2e+02     104     147 ..     179     222 ..     110     227 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00028
   PF03135.9  67 gilsikeYpeetesglldslleldfefiltqsfsflskqkaksflkkkqkkllsaedkaksqieeleealdelrsgdfvlGehhlslvvfaedkekLdk 165
                 ++ +ik Y  +++ + ld +++l++e   + + + l++++++  +++ ++++ +   +ak+++e+l + ld  + ++ +l + +  l+v+++++ +L+ 
  MMETSP1325-20131115|4245_1   5 AFAEIKNYYNDITHNNLDLIKSLKEEVEEMRKKEHLDEKQMQH-ISQENTRMNEPFRQAKQDVENLRAELDRYNWEKEELRSTKARLLVVEDEQRQLKW 102
                 6789*********************************999876.6669********************************99999******99999975 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.11
   PF03135.9 104 kqkaksflkkkqkkllsaedkaksqieeleealdelrsgdfvlG 147
                 ++k+ + l+kk++  l+++ ++   +++ +++   ++s+++++G
  MMETSP1325-20131115|4245_1 179 RTKVDDLLQKKNQAVLDLQAEVERVVAAHNQLTMVVKSKMQEFG 222
                 56777788888888888888888888888888888888888887 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.8    0.0033       5.7      20      71 ..      23      74 ..      16      83 .. 0.89
   2 ?    1.8   0.4      0.11   1.9e+02      54      75 ..     145     166 ..     104     174 .. 0.60
   3 ?    6.5   1.0    0.0039       6.6      29      68 ..     180     219 ..     169     228 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0033
   PF06103.6 20 tlkklkktldevnktvkkltkqvdgitketeellaktnelleDvneKvetld 71
                ++k+lk+ ++e++k     +kq++ i++e +++ +  ++  +Dv++  ++ld
  MMETSP1325-20131115|4245_1 23 LIKSLKEEVEEMRKKEHLDEKQMQHISQENTRMNEPFRQAKQDVENLRAELD 74
                56788888999999988889************************99998888 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.11
   PF06103.6  54 aktnelleDvneKvetldpvfq 75 
                 +k  +l+e ++ K ++l++v +
  MMETSP1325-20131115|4245_1 145 KKYSSLQEVLQAKEAQLNEVLA 166
                 3445566666777777777665 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.0039
   PF06103.6  29 devnktvkkltkqvdgitketeellaktnelleDvneKve 68 
                  +v++ ++k ++ v  +  e+e+++a  n+l+  v++K++
  MMETSP1325-20131115|4245_1 180 TKVDDLLQKKNQAVLDLQAEVERVVAAHNQLTMVVKSKMQ 219
                 3455555555555556666666666666666666666655 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9  11.2   0.00016      0.27      49     153 ..      10     115 ..       2     125 .. 0.82
   2 ?    2.4   1.1     0.031        53     101     151 ..     112     163 ..     108     174 .. 0.81
   3 ?   -0.8   1.5       0.3   5.1e+02     251     291 ..     166     206 ..     130     222 .. 0.47

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00016
                 XXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  49 kqylekLesqnkeeenvealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkf...klkklelekelkslelqleyskrqLdkLr 153
                 k+y + +   n +   ++ l++e++e++k+e+  +++++++++e+ +++e +++ +++ e+l +e  +y  e++++   k + l +e+e++ l+ ++e +  + d ++
  MMETSP1325-20131115|4245_1  10 KNYYNDITHNNLD--LIKSLKEEVEEMRKKEHLDEKQMQHISQENTRMNEPFRQAKQDVENLRAELDRYNWEKEELrstKARLLVVEDEQRQLKWEYEVAALRFDEVK 115
                 4555555555555..478999********************************************999976665551116677899************9999888766 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.031
                 XXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7 101 eelqeekekleee.eeqylrelnkfklkklelekelkslelqleyskrqLdk 151
                  e++++++kl e+ ++  ++ ++k   ++l lek+++sl+  l+  + qL+ 
  MMETSP1325-20131115|4245_1 112 DEVKAQRDKLAEKfQATVYETQQKSGFRNLILEKKYSSLQEVLQAKEAQLNE 163
                 577888899887724567888899999*************999999999975 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.3
                 .XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7 251 kpkeldlyssgglkffkdtkFDkalvafLdilsqfkeevek 291
                    +l+  s+g+++  +d    k   a+Ld+  ++++ v++
  MMETSP1325-20131115|4245_1 166 ARANLESGSAGNMRTKVDDLLQKKNQAVLDLQAEVERVVAA 206
                 22333333444444444444444444444444444444444 PP

>> PF04120.7  Low affinity iron permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   1.9    0.0011       1.8      75     121 ..      20      66 ..      10      89 .. 0.84
   2 ?    1.1   0.3      0.14   2.5e+02      70      85 ..     177     192 ..     141     221 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0011
   PF04120.7  75 ldeLiaavknaknkligleelteeeleelakeyerlaeaaeereevd 121
                   +Li++ k++ +++ + e+l+e++++++++e +r++e  +++++ +
  MMETSP1325-20131115|4245_1  20 NLDLIKSLKEEVEEMRKKEHLDEKQMQHISQENTRMNEPFRQAKQDV 66 
                 5689*******************************998766655443 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.14
   PF04120.7  70 alqlkldeLiaavkna 85 
                 ++ +k+d+L++ +++a
  MMETSP1325-20131115|4245_1 177 NMRTKVDDLLQKKNQA 192
                 4445555555444422 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7  11.9     0.011        19     112     260 ..      25     169 ..       3     195 .. 0.74

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.011
                 XXXXXXXXXXXX.....XXXXXXXX.XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14 112 efleenkveelrelssldeefkalraaeglklgfvaGvikreklealerllwralrgnlyikqaeiee.vledpkekvekevfiiffvgeellekvkkilesfgaelyevpeteeersellskvnkriedlktvleeteselekvlakia 260
                 ++l+e+ vee+r+ + lde++++  ++e ++++       ++ +e+l+++l r + ++  +++ +    v+ed++ + ++e  ++ +  +e + +  k++e+f+a++ye +++++ r+ +   ++k+ ++l++vl+  e +l++vla++ 
  MMETSP1325-20131115|4245_1  25 KSLKEE-VEEMRKKEHLDEKQMQHISQENTRMN-EPFRQAKQDVENLRAELDRYNWEKEELRSTKARLlVVEDEQRQLKWEYEVAALRFDEVKAQRDKLAEKFQATVYETQQKSGFRNLI---LEKKYSSLQEVLQAKEAQLNEVLARAN 169
                 334443.68888888888887777666666665.22233456789999999999888777777776651556666899*******************************88888755544...456777778888888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2003  (0.146504); expected 273.4 (0.02)
Passed bias filter:                      555  (0.0405939); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.93u 0.38s 00:00:01.31 Elapsed: 00:00:00.63
# Mc/sec: 939.52
//
Query:       MMETSP1325-20131115|4247_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   13.8   0.3       0.05   13.1   0.2    1.3  1  PF07282.6  Putative transposase DNA-binding domain
      0.032   13.5   1.7      0.088   12.1   1.2    1.7  1  PF02132.10 RecR protein
      0.034   13.9   3.2       0.44   10.4   0.3    2.2  2  PF09723.5  Zinc ribbon domain
      0.095   11.9   1.9          1    8.6   1.3    2.1  1  PF00320.22 GATA zinc finger


Domain annotation for each model (and alignments):
>> PF07282.6  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   1.5e-05      0.05      30      56 ..      49      78 ..      39      81 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.5e-05
   PF07282.6 30 tCsvCgsknke...alsgrlfkCpnCgfea 56
                 Cs+Cg+++     +++  +++C++C+ e+
  MMETSP1325-20131115|4247_1 49 SCSKCGATSDLdpdEDNPGVYYCNACWEEY 78
                7********999999************986 PP

>> PF02132.10  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.2   2.6e-05     0.088       9      31 ..      39      61 ..      38      75 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.6e-05
  PF02132.10  9 aLseakekvrhCsvCgnlteedp 31
                a  ea +kv  Cs Cg+ ++ dp
  MMETSP1325-20131115|4247_1 39 AVDEAGDKVDSCSKCGATSDLDP 61
                8899***************9774 PP

>> PF09723.5  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.012        41      24      34 ..      45      55 ..      39      60 .. 0.71
   2 ?   10.4   0.3   0.00013      0.44       6      24 ..      69      88 ..      68      92 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.012
   PF09723.5 24 ddeteCPeCgs 34
                d+   C +Cg+
  MMETSP1325-20131115|4247_1 45 DKVDSCSKCGA 55
                56667888887 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00013
   PF09723.5  6 YrCekCgkefevlqsisd.d 24
                Y C++C +e+e+ q +++ d
  MMETSP1325-20131115|4247_1 69 YYCNACWEEYEQEQQMHEaD 88
                9****************955 PP

>> PF00320.22  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.3   0.00031         1       1      34 [.      50      82 ..      50      84 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00031
                -SSS--S--SS----SS-----SSHHHHHHHHHH CS
  PF00320.22  1 CsnCgttkTplWRrgpsgnrtLCnaCglyyrkkg 34
                Cs Cg+t+     +++ g +  CnaC+  y    
  MMETSP1325-20131115|4247_1 50 CSKCGATSDLDPDEDNPGVY-YCNACWEEYEQEQ 82
                66677666666666666777.8*****9987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       676  (0.0494441); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 608.31
//
Query:       MMETSP1325-20131115|4248_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.61
# Mc/sec: 416.42
//
Query:       MMETSP1325-20131115|4246_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.44s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 662.52
//
Query:       MMETSP1325-20131115|4252_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   14.5   3.9      0.023   14.5   2.7    2.2  3  PF03729.8 Short repeat of unknown function (DUF308)
      0.081   12.8   0.1       0.18   11.8   0.0    1.6  1  PF14118.1 YfzA-like protein


Domain annotation for each model (and alignments):
>> PF03729.8  Short repeat of unknown function (DUF308)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       0.4   2.8e+03      24      33 ..      16      25 ..       6      32 .. 0.57
   2 ?   14.5   2.7   3.4e-06     0.023      24      71 ..      62     110 ..      59     111 .. 0.90
   3 ?   -1.5   0.0      0.35   2.4e+03      26      41 ..     121     136 ..     115     147 .. 0.60

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.4
   PF03729.8 24 lvlliGilll 33
                +++l +++l+
  MMETSP1325-20131115|4252_1 16 SAVLNAVVLI 25
                3333333333 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 3.4e-06
   PF03729.8  24 lvlliGilllvsGilqliaafarrkggg.grwlglllGilsiiaGilll 71 
                 +  l+G+++++++ ++li+ f +++g+  ++ l++ +Gi ++i+++++l
  MMETSP1325-20131115|4252_1  62 IFQLFGAFMFMAATTKLITLFGHSEGTFlRKKLFMCWGIADLILAAIVL 110
                 6789******************6666556*****************987 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 0.35
   PF03729.8  26 lliGilllvsGilqli 41 
                 + +++l  + G++ l 
  MMETSP1325-20131115|4252_1 121 IGFAVLHALEGAAFLA 136
                 4555555555555444 PP

>> PF14118.1  YfzA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.6e-05      0.18      39      88 ..      30      79 ..       9      84 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.6e-05
   PF14118.1 39 nfkdlgklaekiveseiftewlaiYkepqfnlltvflgilllidvligai 88
                n+   g+  + i e ++f+ ++   ++p++  ++ ++g+++++ + +++i
  MMETSP1325-20131115|4252_1 30 NMASPGQPLVVIPEDDVFQAHFGAAEDPKMGFIFQLFGAFMFMAATTKLI 79
                4444466677788999**************************99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:01.00
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|4249_1  [L=371]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-23   80.2   1.0    8.5e-23   79.6   0.7    1.3  1  PF04117.7  Mpv17 / PMP22 family
    0.00015   21.3   0.0    0.00025   20.6   0.0    1.3  1  PF00173.23 Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
      0.034   13.3   1.8      0.055   12.7   1.3    1.2  1  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.7   1.9e-26   8.5e-23       2      68 .]     167     232 ..     166     232 .. 0.96

  Alignments for each domain:
  == domain 1    score: 79.6 bits;  conditional E-value: 1.9e-26
   PF04117.7   2 sllegksleeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvnlvslgWntyLSliknk 68 
                 s leg+  +ei ++l+e++ +t  anw vW+++q+ nFa++P++y+vlf+n+v+++Wn+++S+ +nk
  MMETSP1325-20131115|4249_1 167 SALEGRA-HEIPARLRENWASTVYANWGVWVPAQAANFALIPPQYQVLFSNVVGFVWNIIMSYQANK 232
                 6788888.*******************************************************9986 PP

>> PF00173.23  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   5.6e-08   0.00025       2      54 ..     259     351 ..     258     367 .. 0.78

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 5.6e-08
                 BEHHHHHTCE...CTTEEEEECTTEEEETTTTTTTHTST....THHHHTT---BHHHHH.................................H CS
  PF00173.23   2 ftleevskhn...kekdswvvirgkVYDvskflkdhpgg....asailafaGkDaTeaf.................................e 54 
                 +t++e+++++   ++ +++++ +g ++Dv+   +++ +      s + a+aG+ +T+a+                                 e
  MMETSP1325-20131115|4249_1 259 MTAKELRQYDgsdPSRPILLACKGDIFDVTHSGPNNEPSmyapGSGYAALAGRPCTRALalmstdedaltddmsgltpeqlksxgqlahvpdE 351
                 799*********999***************97777777779999***************8888877777666666666666666655555444 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.3   1.2e-05     0.055     176     224 ..      22      93 ..      18     111 .. 0.59

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.2e-05
   PF05308.6 176 visdpteepelevppppppPpPlpavslqqsasai........................elikerkekksaee 224
                 +i++ t+   l++ppppppPpP+p  ++ +++ a+                        +l + ++e++s+e 
  MMETSP1325-20131115|4249_1  22 PIVPTTRRW-LSSPPPPPPPPPPPKHAIFSQYDALleshplltkavtsglicgagdcacQLLQSSSERSSSES 93 
                 555554444.566777777788877777666666566666666666666666666555544444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.65
# Mc/sec: 1367.77
//
Query:       MMETSP1325-20131115|4250_1  [L=324]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-07   28.7   0.1     0.0015   18.1   0.0    3.1  3  PF13405.1  EF-hand domain
    9.5e-06   25.5   0.6     0.0032   17.4   0.1    2.8  3  PF13499.1  EF-hand domain pair
     0.0035   16.4   0.5       0.39   10.0   0.0    3.6  4  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   3.3e-07    0.0015       2      29 ..     155     181 ..     154     188 .. 0.90
   2 !    7.0   0.0    0.0012       5.6       2      26 ..     230     259 ..     229     264 .. 0.84
   3 ?   -2.2   0.0       1.1   4.8e+03      17      27 ..     268     278 ..     266     284 .. 0.67

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 3.3e-07
                 HH---GCC-------B---HHHHHHH.H CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrks 29 
                 lr +F ++D+d+d  i++++L+d+++ +
  MMETSP1325-20131115|4250_1 155 LRGIFAAHDHDHDHMITRAQLVDVMS-M 181
                 7889*********************9.4 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0012
                 HH---GCC---.....----B---HHHHHH CS
   PF13405.1   2 lreaFklfDkd.....gdGkidaeELrdaL 26 
                 l e+F+ fD       ++G i+++ Lr+++
  MMETSP1325-20131115|4250_1 230 LIELFEVFDPPaedgsRSGMITLKTLRHIM 259
                 6788888888888888***********998 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 1.1
                 B---HHHHHHH CS
   PF13405.1  17 idaeELrdaLr 27 
                 ++++E+  +++
  MMETSP1325-20131115|4250_1 268 LTRAEFEEFIT 278
                 67777766554 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.7   7.7e+03      27      52 ..     116     137 ..     104     141 .. 0.58
   2 !   17.4   0.1   6.9e-07    0.0032       1      41 [.     154     194 ..     153     240 .. 0.89
   3 !    5.6   0.0    0.0035        16      10      46 ..     243     273 ..     229     285 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 1.7
   PF13499.1  27 khlgselsdeevrevldyifkelDkn 52 
                 +h++     + v++ ld+  + +D+n
  MMETSP1325-20131115|4250_1 116 DHHL----TDLVEDALDARKGGVDLN 137
                 3333....555666665556666666 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 6.9e-07
   PF13499.1   1 klkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrev 41 
                 +l+ +F ++D d+d  ++++ L+ ++  +g + +d+ ++++
  MMETSP1325-20131115|4250_1 154 QLRGIFAAHDHDHDHMITRAQLVDVMSMIGLKATDKLIQKF 194
                 6888**************************77776665554 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.0035
   PF13499.1  10 DkdgdgyldkeeLlrllkhlgselsdeevrevldyif 46 
                 D +++g ++   L++++   +++  d+ +r +    f
  MMETSP1325-20131115|4250_1 243 DGSRSGMITLKTLRHIMLEVLTP--DRLTRAE----F 273
                 7889*****************99..5555554....2 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   8.6e-05      0.39       2      28 ..     155     181 ..     154     182 .. 0.92
   2 ?   -0.1   0.0      0.15   6.6e+02       1      10 [.     229     238 ..     229     239 .. 0.87
   3 ?    1.2   0.0     0.054   2.5e+02      12      26 ..     245     259 ..     243     262 .. 0.85
   4 ?   -1.2   0.0      0.32   1.5e+03      18      25 ..     272     279 ..     268     282 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 8.6e-05
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 l+ +F+  D D+d  I+   +++++++
  MMETSP1325-20131115|4250_1 155 LRGIFAAHDHDHDHMITRAQLVDVMSM 181
                 6789********************986 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.15
                 HHHHHHHHHC CS
  PF00036.27   1 elkeaFkefD 10 
                 el e+F++fD
  MMETSP1325-20131115|4250_1 229 ELIELFEVFD 238
                 6889*****9 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.054
                 TTSSEBEHHHHHHHH CS
  PF00036.27  12 DgdGkIsfeEfkeal 26 
                  ++G I+++ +++++
  MMETSP1325-20131115|4250_1 245 SRSGMITLKTLRHIM 259
                 589*********999 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 0.32
                 EHHHHHHH CS
  PF00036.27  18 sfeEfkea 25 
                 +feEf+++
  MMETSP1325-20131115|4250_1 272 EFEEFITV 279
                 57888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.67
# Mc/sec: 1158.84
//
Query:       MMETSP1325-20131115|4253_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-22   76.7   7.6      3e-09   36.3   0.0    4.3  3  PF13374.1  Tetratricopeptide repeat
    6.1e-17   61.2   7.2    2.7e-12   46.3   0.1    3.2  3  PF13424.1  Tetratricopeptide repeat
    5.5e-07   29.9  11.7    1.3e-05   25.5   0.1    2.2  2  PF13432.1  Tetratricopeptide repeat
    2.9e-06   26.6   4.5      0.058   13.2   0.0    3.6  3  PF07719.12 Tetratricopeptide repeat
    3.8e-06   26.1   4.5      0.087   12.5   0.0    3.5  3  PF13176.1  Tetratricopeptide repeat
    6.5e-06   25.9   0.8       0.93   10.0   0.0    4.3  4  PF07721.9  Tetratricopeptide repeat
     0.0012   19.2  11.4      0.092   13.3   0.0    3.8  4  PF13428.1  Tetratricopeptide repeat
     0.0033   16.9   4.9        8.9    5.9   0.0    2.9  3  PF13414.1  TPR repeat
      0.009   15.4   6.2        1.2    8.7   0.0    3.6  4  PF00515.23 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.032   14.3   2.0        3.5    7.9   0.0    3.5  4  PF13431.1  Tetratricopeptide repeat
      0.057   13.2   0.7       0.64    9.8   0.0    2.4  3  PF09543.5  Protein of unknown function (DUF2379)
      0.064   13.6   7.3       0.14   12.5   0.0    3.8  4  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   2.7e-12     3e-09       4      41 ..       4      41 ..       2      42 .. 0.95
   2 !   34.4   0.1     1e-11   1.2e-08       1      41 [.      43      83 ..      43      84 .. 0.97
   3 ?    4.7   1.1     0.023        26      15      33 ..     106     124 ..      85     128 .. 0.82

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 2.7e-12
   PF13374.1  4 alnnLAlalrargryeeAlaleeealairrrllGddHP 41
                +  nLA++ r++g+ + A++l+e++l + ++ lG++HP
  MMETSP1325-20131115|4253_1  4 SKGNLAIVMRKQGDNDSARDLYEAVLRVEEATLGAEHP 41
                567**********************************9 PP

  == domain 2    score: 34.4 bits;  conditional E-value: 1e-11
   PF13374.1  1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41
                t+++  nLA++l ++g++  Al+lee++l  ++  lG+dHP
  MMETSP1325-20131115|4253_1 43 TLRTKGNLANVLKEQGDLKGALELEEAVLRGQEMQLGADHP 83
                78999***********************************9 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.023
   PF13374.1  15 rgryeeAlaleeealairr 33 
                  g+++eA al+ +a+++++
  MMETSP1325-20131115|4253_1 106 NGERAEAAALYLRAAEMWE 124
                 5889999999999999886 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.1   2.4e-15   2.7e-12      10      76 ..       7      74 ..       3      76 .. 0.95
   2 !   24.0   1.8   2.2e-08   2.5e-05      10      75 ..      49     122 ..      49     124 .. 0.81
   3 !    6.1   0.4    0.0083       9.5      15      39 ..     103     128 ..      94     149 .. 0.76

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 2.4e-15
   PF13424.1 10 nlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                nla v r++gd d+A++lye +l +  ++lg +hp t+r+  nlan++ ++gd++ Ale+ e +l+  
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDNDSARDLYEAVLRVeEATLGAEHPSTLRTKGNLANVLKEQGDLKGALELEEAVLRGQ 74
                9************************9999*******************************99999865 PP

  == domain 2    score: 24.0 bits;  conditional E-value: 2.2e-08
   PF13424.1  10 nlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgd.......ydeAleylekAlei 75 
                 nla+vl+++gd++ Alel e +l     +lg dhp ++++  nl++++++  +        +eA +++ +A e+
  MMETSP1325-20131115|4253_1  49 NLANVLKEQGDLKGALELEEAVLRGqEMQLGADHPSVLMTKGNLGITLQEVAKeaesngeRAEAAALYLRAAEM 122
                 8*****************999999977799*****************999764233322257777777777776 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.0083
   PF13424.1  15 lrrlgdydeAlelyekalel.lrelg 39 
                  +  g+  eA +ly +a e+   ++g
  MMETSP1325-20131115|4253_1 103 AESNGERAEAAALYLRAAEMwEPQYG 128
                 56678888999999999999555666 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.1   1.2e-08   1.3e-05       4      59 ..       9      72 ..       7      83 .. 0.91
   2 !    7.7   4.4    0.0046       5.2       4      51 ..     100     148 ..      98     163 .. 0.86

  Alignments for each domain:
  == domain 1    score: 25.5 bits;  conditional E-value: 1.2e-08
   PF13432.1  4 ArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraala 59
                A    ++Gd d A++++ea+l+ +        P   + + +la +l ++g+l++A++l +a l+
  MMETSP1325-20131115|4253_1  9 AIVMRKQGDNDSARDLYEAVLRVEeatlgaehPSTLRTKGNLANVLKEQGDLKGALELEEAVLR 72
                556679******************************************************9984 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0046
   PF13432.1   4 ArallraGdydeAlaaleaalala.PeaaeallllaeallrlgrldeAa 51 
                 A+++  +G+ +eA+a++ +a + + P++    ++ a a +++ +l +A 
  MMETSP1325-20131115|4253_1 100 AKEAESNGERAEAAALYLRAAEMWePQYGKGNQYSAGARAQAQKLSQAK 148
                 89999*************************9999999999999999886 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   5.1e-05     0.058       6      30 ..       7      31 ..       5      34 .. 0.92
   2 !    6.7   0.0    0.0058       6.6       6      22 ..      49      65 ..      46      71 .. 0.93
   3 !    6.2   0.5    0.0085       9.7       8      29 ..     100     121 ..      94     122 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.1e-05
                HHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAleafekAlel 30
                nl+ + +k+gd + A++++e +l+ 
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDNDSARDLYEAVLRV 31
                89*******************9985 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0058
                HHHHHHHHTT-HHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAle 22
                nl++++ ++gd++ Ale
  MMETSP1325-20131115|4253_1 49 NLANVLKEQGDLKGALE 65
                89*************98 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.0085
                 HHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   8 GlayyklgdyeeAleafekAle 29 
                 ++ ++ +g+ +eA++++ +A e
  MMETSP1325-20131115|4253_1 100 AKEAESNGERAEAAALYLRAAE 121
                 6667889*************87 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   7.7e-05     0.087       4      34 ..       7      37 ..       6      39 .. 0.82
   2 ?    5.5   0.1     0.013        15       4      24 ..      49      69 ..      48      80 .. 0.85
   3 !    8.3   0.1    0.0017         2      10      34 ..     104     128 ..      95     130 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.7e-05
   PF13176.1  4 nLarlysrlgdyekAielyeraLaltkdpld 34
                nLa + +++gd + A +lye+ L+++++ l+
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDNDSARDLYEAVLRVEEATLG 37
                67777799*************8888777665 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.013
   PF13176.1  4 nLarlysrlgdyekAielyer 24
                nLa++  ++gd + A+el e+
  MMETSP1325-20131115|4253_1 49 NLANVLKEQGDLKGALELEEA 69
                9**************998665 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0017
   PF13176.1  10 srlgdyekAielyeraLaltkdpld 34 
                 ++ g++ +A+ ly ra ++++ +++
  MMETSP1325-20131115|4253_1 104 ESNGERAEAAALYLRAAEMWEPQYG 128
                 568************9999988876 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00081      0.93       5      25 ..       6      26 ..       2      27 .. 0.90
   2 !    9.1   0.0    0.0015       1.7       2      23 ..      45      66 ..      44      66 .. 0.88
   3 ?    1.6   0.3      0.42   4.8e+02      15      24 ..     107     116 ..     106     123 .. 0.84
   4 ?   -1.5   0.0       4.1   4.7e+03      19      24 ..     136     141 ..     133     143 .. 0.56

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00081
                ---HHHHHH-------HHHHH CS
   PF07721.9  5 laLArallalGdldeAralle 25
                 +LA ++  +Gd d Ar+l e
  MMETSP1325-20131115|4253_1  6 GNLAIVMRKQGDNDSARDLYE 26
                69****************998 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0015
                HHH---HHHHHH-------HHH CS
   PF07721.9  2 rallaLArallalGdldeAral 23
                r+  +LA +l ++Gdl  A++l
  MMETSP1325-20131115|4253_1 45 RTKGNLANVLKEQGDLKGALEL 66
                56679**************986 PP

  == domain 3    score: 1.6 bits;  conditional E-value: 0.42
                 ------HHHH CS
   PF07721.9  15 GdldeArall 24 
                 G+ +eA+al 
  MMETSP1325-20131115|4253_1 107 GERAEAAALY 116
                 8899999985 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 4.1
                 --HHHH CS
   PF07721.9  19 eArall 24 
                  Ara +
  MMETSP1325-20131115|4253_1 136 GARAQA 141
                 555554 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0     8e-05     0.092       6      30 ..       7      31 ..       5      47 .. 0.87
   2 ?    6.2   0.0     0.015        17       5      23 ..      48      66 ..      42      87 .. 0.83
   3 ?    3.4   2.3      0.13   1.4e+02       7      30 ..      99     122 ..      94     143 .. 0.80
   4 ?   -1.2   0.1       3.6   4.1e+03      19      28 ..     136     145 ..     126     160 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8e-05
   PF13428.1  6 alarallalGdpdeAiallrralal 30
                 la++++ +Gd d A++l++++l+ 
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDNDSARDLYEAVLRV 31
                59********************984 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.015
   PF13428.1  5 lalarallalGdpdeAial 23
                  la++l ++Gd+++A++l
  MMETSP1325-20131115|4253_1 48 GNLANVLKEQGDLKGALEL 66
                579*************994 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.13
   PF13428.1   7 larallalGdpdeAiallrralal 30 
                  a   + +G+ +eA+al+ ra++ 
  MMETSP1325-20131115|4253_1  99 VAKEAESNGERAEAAALYLRAAEM 122
                 56667889*********9999874 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 3.6
   PF13428.1  19 eAiallrral 28 
                 +A+a+++++ 
  MMETSP1325-20131115|4253_1 136 GARAQAQKLS 145
                 4555555543 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0078       8.9      42      67 ..       7      31 ..       5      33 .. 0.80
   2 !    5.6   0.0    0.0096        11       8      30 ..      49      71 ..      42     103 .. 0.76
   3 ?    5.0   0.8     0.014        16      10      36 ..     100     127 ..      91     149 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0078
   PF13414.1 42 nlAlaylklgkdyeeAledyekAlel 67
                nlA + +k+g++ ++A++ ye +l+ 
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDN-DSARDLYEAVLRV 31
                888999999965.8999999988875 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0096
   PF13414.1  8 elGnalfkegdydeAieayekAl 30
                +l+n+l ++gd+++A+e+ e  l
  MMETSP1325-20131115|4253_1 49 NLANVLKEQGDLKGALELEEAVL 71
                68888889999999988765555 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.014
   PF13414.1  10 GnalfkegdydeAieayekAleld.pnn 36 
                 + ++ ++g+ +eA ++y +A e++ p++
  MMETSP1325-20131115|4253_1 100 AKEAESNGERAEAAALYLRAAEMWePQY 127
                 6677889**************9963555 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0029       3.3       6      30 ..       7      31 ..       4      33 .. 0.88
   2 !    8.7   0.0     0.001       1.2       5      22 ..      48      65 ..      45      66 .. 0.91
   3 ?    0.3   0.3      0.49   5.6e+02      13      29 ..     105     121 ..     100     124 .. 0.78
   4 ?   -3.7   0.1       8.6   9.8e+03       5      11 ..     127     133 ..     126     134 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0029
                HHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23  6 nlGnaylklgkydeAleyyekALel 30
                nl+ + +k+g+ d A + ye +L++
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDNDSARDLYEAVLRV 31
                7888889**************9987 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.001
                HHHHHHHHHTT-HHHHHH CS
  PF00515.23  5 ynlGnaylklgkydeAle 22
                 nl+n++ ++g+++ Ale
  MMETSP1325-20131115|4253_1 48 GNLANVLKEQGDLKGALE 65
                69**************98 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.49
                 HTT-HHHHHHHHHHHHH CS
  PF00515.23  13 klgkydeAleyyekALe 29 
                 ++g+  eA + y +A e
  MMETSP1325-20131115|4253_1 105 SNGERAEAAALYLRAAE 121
                 67888899999999866 PP

  == domain 4    score: -3.7 bits;  conditional E-value: 8.6
                 HHHHHHH CS
  PF00515.23   5 ynlGnay 11 
                 y++Gn y
  MMETSP1325-20131115|4253_1 127 YGKGNQY 133
                 7889877 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.077        88      18      33 ..       7      22 ..       6      23 .. 0.93
   2 ?    7.9   0.0    0.0031       3.5      18      33 ..      49      64 ..      40      65 .. 0.92
   3 ?   -1.3   0.0       2.6     3e+03      18      28 ..      91     108 ..      83     114 .. 0.67
   4 ?   -1.3   0.1       2.7   3.1e+03       2       8 ..     116     122 ..     115     149 .. 0.55

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.077
   PF13431.1 18 nLAelllnnGdleeAe 33
                nLA +  ++Gd + A+
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDNDSAR 22
                9***********9997 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0031
   PF13431.1 18 nLAelllnnGdleeAe 33
                nLA++l+++Gdl+ A+
  MMETSP1325-20131115|4253_1 49 NLANVLKEQGDLKGAL 64
                9************997 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 2.6
   PF13431.1  18 nLAelll.......nnGd 28 
                 nL+ +l+       +nG+
  MMETSP1325-20131115|4253_1  91 NLGITLQevakeaeSNGE 108
                 788888765555554554 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 2.7
   PF13431.1   2 yekalel 8  
                 y++a e 
  MMETSP1325-20131115|4253_1 116 YLRAAEM 122
                 5555554 PP

>> PF09543.5  Protein of unknown function (DUF2379)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00056      0.64      83     106 ..      10      33 ..       2      37 .. 0.88
   2 ?    1.0   0.0      0.31   3.5e+02      83     102 ..      52      71 ..      42      76 .. 0.80
   3 ?   -0.1   0.1      0.67   7.7e+02      91     102 ..      60      71 ..      55     121 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00056
   PF09543.5  83 lrlrdagDldgArqelrevLavEv 106
                 + +r++gD d+Ar   + vL vE 
  MMETSP1325-20131115|4253_1  10 IVMRKQGDNDSARDLYEAVLRVEE 33 
                 56899*****************96 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.31
   PF09543.5  83 lrlrdagDldgArqelrevL 102
                   l+++gDl gA +  + vL
  MMETSP1325-20131115|4253_1  52 NVLKEQGDLKGALELEEAVL 71 
                 56899******987766666 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.67
   PF09543.5  91 ldgArqelrevL 102
                 l gA +  + vL
  MMETSP1325-20131115|4253_1  60 LKGALELEEAVL 71 
                 444443333333 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00012      0.14       5      28 ..       7      30 ..       7      31 .. 0.93
   2 ?    2.2   0.0      0.23   2.6e+02       5      25 ..      49      69 ..      49      72 .. 0.81
   3 ?   -0.2   0.1       1.4   1.6e+03      13      25 ..     106     118 ..      92     123 .. 0.70
   4 ?   -0.8   0.4       2.2   2.5e+03      26      26 ..     144     144 ..     126     158 .. 0.57

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00012
                HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAlealerlik 28
                +la +++k+gd d A++++e +++
  MMETSP1325-20131115|4253_1  7 NLAIVMRKQGDNDSARDLYEAVLR 30
                6999****************9985 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.23
                HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAlealer 25
                +la +++++gd   Ale+ e 
  MMETSP1325-20131115|4253_1 49 NLANVLKEQGDLKGALELEEA 69
                6899999*99*****997555 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHH CS
   PF13174.1  13 lgdtdeAlealer 25 
                 +g+ +eA +++ r
  MMETSP1325-20131115|4253_1 106 NGERAEAAALYLR 118
                 4677777776644 PP

  == domain 4    score: -0.8 bits;  conditional E-value: 2.2
                 H CS
   PF13174.1  26 l 26 
                 l
  MMETSP1325-20131115|4253_1 144 L 144
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.72
# Mc/sec: 595.76
//
Query:       MMETSP1325-20131115|4254_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.7e-06   25.4   0.3      1e-05   25.1   0.2    1.2  1  PF12159.3 Protein of unknown function (DUF3593)


Domain annotation for each model (and alignments):
>> PF12159.3  Protein of unknown function (DUF3593)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.2   7.4e-10     1e-05       4      39 ..      44      80 ..      41      81 .] 0.88

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 7.4e-10
   PF12159.3  4 dalfalSllpYlvFLvllkksks.lpklallGfaltL 39
                 ++f+ Sl pY++FL++l+ +k+ +p l+++Gf+ +L
  MMETSP1325-20131115|4254_1 44 GKFFQGSLPPYVAFLYFLSYEKNqTPPLMKFGFSYLL 80
                689***************766666*********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.31s 00:00:00.63 Elapsed: 00:00:00.50
# Mc/sec: 388.21
//
Query:       MMETSP1325-20131115|4256_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   12.2   2.5       0.12   12.1   1.7    1.2  1  PF08595.6  RXT2-like, N-terminal
       0.36    9.8   8.1       0.42    9.6   5.6    1.1  1  PF07222.7  Proacrosin binding protein sp32
       0.45   10.2   7.8       0.48   10.1   5.4    1.1  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
       0.51    9.7   7.4       0.57    9.5   5.1    1.1  1  PF03286.9  Pox virus Ag35 surface protein
       0.63    9.4  10.2       0.79    9.1   7.1    1.2  1  PF03066.10 Nucleoplasmin
       0.81    8.5   5.5       0.95    8.2   3.8    1.1  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
        1.4    8.2  11.2        1.7    8.0   7.8    1.1  1  PF11861.3  Domain of unknown function (DUF3381)
        2.5    8.4   5.4          4    7.7   3.8    1.3  1  PF13882.1  C-terminal domain of Fibronectin type III
        2.7    8.1   9.4        4.3    7.5   6.5    1.3  1  PF09026.5  Centromere protein B dimerisation domain
        2.8    8.0  22.1        3.8    7.6  15.3    1.3  1  PF03247.9  Prothymosin/parathymosin family
        3.1    5.5   6.2        3.5    5.4   4.3    1.1  1  PF02724.9  CDC45-like protein


Domain annotation for each model (and alignments):
>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.7   9.3e-05      0.12      50      85 ..      56      91 ..      22     104 .. 0.61

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 9.3e-05
   PF08595.6 50 kkepridedenelddededdeeeededeeeaeenpl 85
                + ++++ e+e+e  + +e++  e++++eee+ee p 
  MMETSP1325-20131115|4256_1 56 RGRKKVVEEEEEVHEVEEEEAVEDEDEEEEEEETPR 91
                444555555555554444444444444444444443 PP

>> PF07222.7  Proacrosin binding protein sp32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   5.6   0.00034      0.42     179     233 ..      36      89 ..      19      98 .. 0.62

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00034
   PF07222.7 179 llksslsldekekvkaakp..keeqllekkqeqleehkteekkkqeeqeeeekeeea 233
                   +++l+ +++ek+++ak   ++++++e   e+ e h+ ee++ +e+ +eee+eee+
  MMETSP1325-20131115|4256_1  36 TCEAALEGGGNEKKPKAKSrrGRKKVVE---EEEEVHEVEEEEAVEDEDEEEEEEET 89 
                 4567888899988887554004444333...44455777777777766666655554 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   5.4   0.00039      0.48     162     203 ..      47      87 ..       7      95 .. 0.44

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00039
   PF11705.3 162 lsalekkekeldaedeeeedkkee.eeeeeeeeedddfeDddd 203
                  ++ ++k++++ ++ +eee++++e eeee  e+ed++   +++
  MMETSP1325-20131115|4256_1  47 EKKPKAKSRRGRKKVVEEEEEVHEvEEEEAVEDEDEEE--EEE 87 
                 22222233333333333333333212222222222222..222 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.1   0.00046      0.57      50     102 ..      48      93 ..      24     103 .. 0.51

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00046
   PF03286.9  50 kkpkkkrkttkrkpvkkkkskkkekekeeeeekkeeededkdteenendddek 102
                 kkpk k    +      kk   +e+e +e+ee++  eded+++ee+e+ + ++
  MMETSP1325-20131115|4256_1  48 KKPKAKSRRGR------KKVVEEEEEVHEVEEEEAVEDEDEEEEEEET-PRSN 93 
                 22222222222......2222223333334444444444443333333.2222 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   7.1   0.00064      0.79     104     140 ..      58      93 ..      42     101 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00064
                 EEE...........----XXXXXXXXXXXXXXXXXXX CS
  PF03066.10 104 qhlvaleedesldeeddeedeeeeddeedddeeeeee 140
                 ++ v+ ee+e+++e ++ee  e+ed+ee+++e   ++
  MMETSP1325-20131115|4256_1  58 RKKVV-EEEEEVHEVEEEEAVEDEDEEEEEEETPRSN 93 
                 55444.4556667777777777776666666655444 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.8   0.00077      0.95      43      76 ..      58      93 ..      30     103 .. 0.54

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00077
  PF03896.11 43 ddvvdedeedeaeveedekteaeeeedee.ea.gev 76
                 ++v e+ee+  evee+e  e e+ee+ee e+ ++ 
  MMETSP1325-20131115|4256_1 58 RKKVVEEEEEVHEVEEEEAVEDEDEEEEEeETpRSN 93
                334445555555565655555333333331333333 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   7.8    0.0014       1.7      91     143 ..      41      99 ..      27     101 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0014
   PF11861.3  91 rkelgekekkkek......eeeeeeeeveekdeeeqideelkellekelakekreerre 143
                  +  g+++k+k+k      +  eeeeev e +eee +++e +e+ e+e+ + +r ++r+
  MMETSP1325-20131115|4256_1  41 LEGGGNEKKPKAKsrrgrkKVVEEEEEVHEVEEEEAVEDEDEEEEEEETPRSNRMSKRA 99 
                 55556677777766655555555688888889999999888888888888877777765 PP

>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.8    0.0032         4      29      68 ..      53      94 ..      51     103 .. 0.55

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0032
   PF13882.1 29 krsrggkysvkekedakldpeeqpkkd..eefeeysreedek 68
                k++rg+k  v+e+e+++  +ee+  +d  ee ee + + +++
  MMETSP1325-20131115|4256_1 53 KSRRGRKKVVEEEEEVHEVEEEEAVEDedEEEEEEETPRSNR 94
                678888888888888876666655444222222333333332 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.5    0.0035       4.3      16      42 ..      64      90 ..      55     101 .. 0.63

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0035
   PF09026.5 16 seeeeedeeedeededeedeeeddevp 42
                 eee ++ ee+e  ede++eee++e p
  MMETSP1325-20131115|4256_1 64 EEEEVHEVEEEEAVEDEDEEEEEEETP 90
                233333444555567777777777776 PP

>> PF03247.9  Prothymosin/parathymosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  15.3     0.003       3.8      41      88 ..      52     100 ..      23     101 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.003
   PF03247.9  41 eNgedeaddeedeeeekeeedeeeegegeeeeeeeee.eeegatvkraa 88 
                   +     + ++eeee++e +eee  e+e+eeeeeee    +   kraa
  MMETSP1325-20131115|4256_1  52 AKSRRGRKKVVEEEEEVHEVEEEEAVEDEDEEEEEEEtPRSNRMSKRAA 100
                 4455666788999999999999999999888888887323444556665 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   4.3    0.0028       3.5     116     154 ..      57      95 ..      33     101 .. 0.55

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0028
   PF02724.9 116 eerdayealvemkeeeeeesdedsdseddeeeeessase 154
                   ++ +e+ +e +e+eeee  ed+d+e++eee++ s++ 
  MMETSP1325-20131115|4256_1  57 GRKKVVEEEEEVHEVEEEEAVEDEDEEEEEEETPRSNRM 95 
                 333444444444445555555555555555555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1104  (0.080749); expected 273.4 (0.02)
Passed bias filter:                      632  (0.0462259); expected 273.4 (0.02)
Passed Vit filter:                       137  (0.0100205); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.50u 0.46s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 483.88
//
Query:       MMETSP1325-20131115|4255_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   12.2   0.2       0.35   10.9   0.1    1.8  1  PF06985.6 Heterokaryon incompatibility protein (HET)
        4.9    7.1  12.0       0.66   10.0   0.8    2.9  3  PF05835.7 Synaphin protein


Domain annotation for each model (and alignments):
>> PF06985.6  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   5.1e-05      0.35      57     105 ..      42      90 ..      38     196 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 5.1e-05
   PF06985.6  57 daekseqvqsmgdiYskaelvivwlgeesedsllalealralkkeslee 105
                   e++ ++qsmg+++ +++lv ++ g++ +++++a + +r++ +e +++
  MMETSP1325-20131115|4255_1  42 RREREGKLQSMGSMFGSSQLVSAMGGSTGAQDTVAKQLPRNQFDEIQKQ 90 
                 579999****************999999876655555555544444444 PP

>> PF05835.7  Synaphin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.14   9.6e+02      33      55 ..      28      50 ..      11      54 .. 0.60
   2 ?   10.0   0.8   9.6e-05      0.66       4      64 ..      75     136 ..      72     139 .. 0.88
   3 ?    1.9   1.3     0.029     2e+02      34      65 ..     156     187 ..     146     191 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.14
                ----------------HHHHHHH CS
   PF05835.7 33 eeeeeevqealreaeerRkekyr 55
                  +++++++ lr +  +R+ k +
  MMETSP1325-20131115|4255_1 28 STQAAAAAAELRRQRREREGKLQ 50
                34444555556666666666655 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 9.6e-05
                 XXXXXXXXXXXXXXXXXXXX------..------------------HHHHHHHHHHHHHHHH CS
   PF05835.7   4 lakqlvGnqlkevkgalggkedegde.ekaeeeeeevqealreaeerRkekyrkmeeERekm 64 
                 +akql  nq +e++++l+g++d  d+ ++a e ++ ++     +  +  + + + e E e m
  MMETSP1325-20131115|4255_1  75 VAKQLPRNQFDEIQKQLEGGKDGADGgSAAPEVDPGMDMMATVQVVKETAEHERAETELEAM 136
                 799999**************888888788889999999999999999999999999999988 PP

  == domain 3    score: 1.9 bits;  conditional E-value: 0.029
                 ---------------HHHHHHHHHHHHHHHHH CS
   PF05835.7  34 eeeeevqealreaeerRkekyrkmeeERekmR 65 
                  ee + ++a+r   ++R +   + eeE e++R
  MMETSP1325-20131115|4255_1 156 AEEMAKKKARRPVTDQRSNSVFQLEEEVEQLR 187
                 45666789999*******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       676  (0.0494441); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1091.20
//
Query:       MMETSP1325-20131115|4251_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       631  (0.0461527); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.32s 00:00:01.03 Elapsed: 00:00:00.55
# Mc/sec: 1660.02
//
Query:       MMETSP1325-20131115|4258_1  [L=409]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0031   16.8  51.9      0.032   13.5   9.9    4.6  4  PF02412.13 Thrombospondin type 3 repeat


Domain annotation for each model (and alignments):
>> PF02412.13  Thrombospondin type 3 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.3   1.9e-05      0.26      15      33 ..      78      96 ..      76      99 .. 0.85
   2 ?   -0.7   0.9     0.067   9.1e+02       4      10 ..     107     113 ..     106     115 .. 0.53
   3 !    7.6  10.2   0.00017       2.3       6      29 ..     126     155 ..     124     157 .. 0.88
   4 !   13.5   9.9   2.3e-06     0.032       4      31 ..     166     198 ..     164     203 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 1.9e-05
  PF02412.13 15 DfDnDgvqddlDNCprnan 33
                D DnDg+ d  D C ++ +
  MMETSP1325-20131115|4258_1 78 DRDNDGIADEHDFCVNSHK 96
                99************88765 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.067
  PF02412.13   4 DsDgvGD 10 
                 D+Dg GD
  MMETSP1325-20131115|4258_1 107 DRDGDGD 113
                 4555555 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.00017
  PF02412.13   6 DgvGDaC......dkDfDnDgvqddlDNCp 29 
                 D  GD C      d+D DnDgv+d+ D C+
  MMETSP1325-20131115|4258_1 126 DHDGDGCrdgsieDTDRDNDGVDDVDDMCA 155
                 66788888888******************7 PP

  == domain 4    score: 13.5 bits;  conditional E-value: 2.3e-06
  PF02412.13   4 DsDgvGDaC.....dkDfDnDgvqddlDNCprn 31 
                 + D  GD C     d+D D+Dgv++ +D Cp +
  MMETSP1325-20131115|4258_1 166 NTDYDGDGCqdggeDQDDDGDGVNNPVDLCPHT 198
                 77889999*9999******************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 1884.83
//
Query:       MMETSP1325-20131115|4259_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|4261_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.62
# Mc/sec: 324.67
//
Query:       MMETSP1325-20131115|4260_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.57
# Mc/sec: 1404.76
//
Query:       MMETSP1325-20131115|4262_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.81
# Mc/sec: 795.83
//
Query:       MMETSP1325-20131115|4264_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 766.83
//
Query:       MMETSP1325-20131115|4263_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0018   17.8   6.7       0.03   13.9   2.0    2.3  2  PF13903.1 PMP-22/EMP/MP20/Claudin tight junction
  ------ inclusion threshold ------
      0.021   14.5   0.5      0.039   13.6   0.3    1.5  1  PF07284.6 2-vinyl bacteriochlorophyllide hydratase (BCHF)
      0.042   13.1   1.5        0.2   10.9   0.6    2.0  2  PF13567.1 Domain of unknown function (DUF4131)
      0.045   13.3   7.2      0.021   14.4   1.4    2.0  2  PF07695.6 7TM diverse intracellular signalling
      0.057   11.4   1.3          2    6.3   0.9    2.0  2  PF10131.4 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
      0.075   12.1   0.2        0.2   10.7   0.0    1.7  2  PF12768.2 Cortical protein marker for cell polarity
       0.11   12.2   7.4       0.26   11.0   5.2    1.6  1  PF12822.2 Protein of unknown function (DUF3816)
       0.12   11.3   3.0      0.048   12.5   0.2    1.6  2  PF12698.2 ABC-2 family transporter protein
       0.22   10.3   2.8       0.27   10.0   1.5    1.4  2  PF03239.9 Iron permease FTR1 family


Domain annotation for each model (and alignments):
>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   2.0     2e-05      0.03      60     123 ..      30     115 ..       3     134 .. 0.69
   2 !    5.8   0.1    0.0059       8.9      99     141 ..     146     188 ..     123     197 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2e-05
   PF13903.1  60 s.....................atalldltrvvivflllglvlillaavlallaslk.ksktlllltgvllllagilillavvlyv 123
                                       +++++++++ vivf+++gl++++l   l+  ++   k k++++++g++ll+a++  + +v + +
  MMETSP1325-20131115|4263_1  30 AapqlmnlanicfvffvistgiVFSRPNTAKGVIVFCCFGLIAACLLPYLVYTGLKHhKGKRIYMAFGCSLLMAFVNAVMFVDQIL 115
                 1334444555666677777788899999************999888877655554442446**************98887775544 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0059
   PF13903.1  99 tlllltgvllllagilillavvlyvqkvqleikrnvqtwqsel 141
                  +++ +g++  +++++i+l ++l   +++++   + ++ ++ +
  MMETSP1325-20131115|4263_1 146 GVYRSSGIAVGTTFLMIFLSLILCRASYKYNRLGYSSQSNQKQ 188
                 78999999*********************98655444444433 PP

>> PF07284.6  2-vinyl bacteriochlorophyllide hydratase (BCHF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.3   2.6e-05     0.039      19      72 ..      35      88 ..      20     124 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.6e-05
   PF07284.6 19 liLaPiqflvflvslvlvllylatgegfllvtvsiliktlllalllitGaifek 72
                + La i f++f++s ++v+   +t +g+++  +  li ++ll  l++tG  + k
  MMETSP1325-20131115|4263_1 35 MNLANICFVFFVISTGIVFSRPNTAKGVIVFCCFGLIAACLLPYLVYTGLKHHK 88
                349**********************************************87654 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.6   0.00013       0.2       2      62 ..      49     113 ..      48     130 .. 0.84
   2 ?    0.4   0.0      0.23   3.4e+02      14      34 ..     155     175 ..     146     193 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00013
   PF13567.1   2 lGillaalaslplgllllalllalllllllflkr....rkrrrlllllglllllaglylllrapq 62 
                 +Gi+++++++ +  +++ +++l++++ll +++++     k +r+ +++g+ ll+a++ + + ++q
  MMETSP1325-20131115|4263_1  49 TGIVFSRPNTAKGVIVFCCFGLIAACLLPYLVYTglkhHKGKRIYMAFGCSLLMAFVNAVMFVDQ 113
                 69999988888888888888888888887777778888999999999999999999999988877 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.23
   PF13567.1  14 lgllllalllalllllllflk 34 
                 +g  +l+++l l+l+ + +++
  MMETSP1325-20131115|4263_1 155 VGTTFLMIFLSLILCRASYKY 175
                 444555555555555555533 PP

>> PF07695.6  7TM diverse intracellular signalling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.4   1.4e-05     0.021      95     177 ..      30     115 ..      14     132 .. 0.50
   2 ?    1.8   0.2     0.093   1.4e+02       6      22 ..     152     168 ..     146     180 .. 0.58

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.4e-05
   PF07695.6  95 rllklllllavllsllllllpll...pyteslslaqllallvilfllligikaw..rkgnkparyfl.lawlllligvlidilsllgll 177
                   ++l+ l  ++++++++++ ++   p t    +++    l++ +ll  ++  +  +k++k+ r+++ ++ +ll+++v   +  + ++l
  MMETSP1325-20131115|4263_1  30 AAPQLMNLANICFVFFVISTGIVfsrPNTAKGVIVFCCFGLIAACLLPYLV--YtgLKHHKGKRIYMaFGCSLLMAFVNAVM-FVDQIL 115
                 444555555555555555544442223333333333333333333333333..35699999999999777776666544433.333332 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.093
   PF07695.6   6 glllGillalalynlfl 22 
                 g+ +G+ +++++ +l+l
  MMETSP1325-20131115|4263_1 152 GIAVGTTFLMIFLSLIL 168
                 44444444444444444 PP

>> PF10131.4  6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.9    0.0013         2      58     115 ..      39     105 ..      33     121 .. 0.85
   2 ?    3.2   0.0     0.011        17     285     320 ..     157     192 ..     137     211 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0013
   PF10131.4  58 avLwllfpenlrvafseGniprvla.........iaLvpllllflyvfvekrekrslialallmsla 115
                  + +++f     ++fs  n ++ ++           L+p+l++++++ ++ ++   ++  +llm+ +
  MMETSP1325-20131115|4263_1  39 NICFVFFVISTGIVFSRPNTAKGVIvfccfgliaACLLPYLVYTGLKHHKGKRIYMAFGCSLLMAFV 105
                 567788888888889999999998889998998889****************988888888888765 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.011
   PF10131.4 285 avllaillaillvdsvisfnyigyeakkltqvaeql 320
                   +l+i+l+++l +++ + n +gy+++ +++  ++ 
  MMETSP1325-20131115|4263_1 157 TTFLMIFLSLILCRASYKYNRLGYSSQSNQKQHKKA 192
                 5789**********************9998877765 PP

>> PF12768.2  Cortical protein marker for cell polarity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.67     1e+03     223     249 ..      85     111 ..      80     143 .. 0.81
   2 ?   10.7   0.0   0.00013       0.2     234     271 ..     151     188 ..     122     196 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.67
   PF12768.2 223 klsrgiVVlIsLaiAlgtvfLlgllgi 249
                 k+++g+ +  +++++l + f+ +++++
  MMETSP1325-20131115|4263_1  85 KHHKGKRIYMAFGCSLLMAFVNAVMFV 111
                 678888899999999988887665554 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00013
   PF12768.2 234 LaiAlgtvfLlgllgiilalirrkrqkysyapqkqrid 271
                  +iA+gt+fL+  l++il++++ k ++ +y +q+++ +
  MMETSP1325-20131115|4263_1 151 SGIAVGTTFLMIFLSLILCRASYKYNRLGYSSQSNQKQ 188
                 58*******************99988888877765443 PP

>> PF12822.2  Protein of unknown function (DUF3816)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   5.2   0.00017      0.26      69     125 ..      43     115 ..      33     169 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00017
   PF12822.2  69 iflgf................llsfvpriligviagllykkhkkkkkkekvlsiiisgvlgtivatlllilii 125
                 +f+++                +++ +  i+  ++++l+y + k++k k+++++++ s+++ ++ a+ ++  i+
  MMETSP1325-20131115|4263_1  43 VFFVIstgivfsrpntakgviVFCCFGLIAACLLPYLVYTGLKHHKGKRIYMAFGCSLLMAFVNAVMFVDQIL 115
                 444444444556667777766788888888999999********************98877766666643333 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   3.2e-05     0.048     248     343 ..      38     166 ..      34     171 .. 0.71
   2 ?   -1.6   1.3      0.62   9.5e+02      32      75 ..     176     212 ..     153     216 .. 0.45

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.2e-05
   PF12698.2 248 fglayialgyllsslfksestaqlvisililllsgfflglfp.leslp......sflkwifsiiPffslgdgllriitgd.lse.........................illsliiLllfavvylllal 343
                   ++++++    + +f+++ ta +vi+++ + l++++l+ ++  + l        ++++  s++ +f  ++++ + i +  + +                         +++s +i + ++++++ l+l
  MMETSP1325-20131115|4263_1  38 ANICFVFFVISTGIVFSRPNTAKGVIVFCCFGLIAACLLPYLvYTGLKhhkgkrIYMAFGCSLLMAFVNAVMFVDQILNIlNLQlidisnyaspcedvkhvnklecergVYRSSGIAVGTTFLMIFLSL 166
                 445666677777999**********9999996666666666524445556665555888899*************997776666777778888899999999999999955555555555555555443 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.62
   PF12698.2  32 lpvavvdednsslskqlvealeasptvkikevdseeeakkalkn 75 
                  ++++  ++n+      +++ +a ++++ +e++ +ee k+ ++n
  MMETSP1325-20131115|4263_1 176 NRLGYSSQSNQ------KQHKKAAEDFS-EEYKQTEEYKQNYAN 212
                 34555555532......23333344444.555666666665555 PP

>> PF03239.9  Iron permease FTR1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.5   0.00018      0.27     155     214 ..      49     110 ..      42     128 .. 0.76
   2 ?   -3.1   0.0       1.7   2.5e+03     202     217 ..     157     172 ..     148     199 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00018
   PF03239.9 155 aaivaytvkrvsalilgvvlGaliavvlglliyrglvklslqsffilegf..lLllvaagLf 214
                 ++iv + ++ +  +i+    G+++a++l +l+y gl    +++  ++ g+  l+++v a+ f
  MMETSP1325-20131115|4263_1  49 TGIVFSRPNTAKGVIVFCCFGLIAACLLPYLVYTGLKHHKGKRIYMAFGCslLMAFVNAVMF 110
                 34555555577889999999***********************9999887225556666666 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 1.7
   PF03239.9 202 egflLllvaagLfsvg 217
                 ++fl+++++  L  ++
  MMETSP1325-20131115|4263_1 157 TTFLMIFLSLILCRAS 172
                 4555555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       980  (0.0716793); expected 273.4 (0.02)
Passed bias filter:                      567  (0.0414716); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.42s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 1004.63
//
Query:       MMETSP1325-20131115|4266_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   14.1   5.5      0.084   12.3   2.0    2.3  2  PF01391.13 Collagen triple helix repeat (20 copies)


Domain annotation for each model (and alignments):
>> PF01391.13  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.0   6.1e-06     0.084       7      46 ..       5      45 ..       3      56 .. 0.49
   2 ?    8.6   3.3   8.3e-05       1.1       1      56 [.      14      70 ..      14      74 .. 0.57

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 6.1e-06
  PF01391.13  7 GepGppGppGkrGepGeaGekGekGpaGekGppGaa.GkpG 46
                G +G+  ++G +G  G +G   e+G aG  G +G + G +G
  MMETSP1325-20131115|4266_1  5 GMKGQVRHDGYAGVMGYEGTGEEDGYAGVMGYEGTDxGMMG 45
                44444444555555555555555555555555543213333 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 8.3e-05
  PF01391.13  1 GppGepGepGppGppGkrGepGeaGe.kGekGpaGekGppGaaGkpGapGekGeaGa 56
                G +G +G +G   ++G +G  G +G   G+ G + + G + +  ++G +G  G +G+
  MMETSP1325-20131115|4266_1 14 GYAGVMGYEGTGEEDGYAGVMGYEGTdXGMMGTQESWGMKEQVRHDGYAGVMGYEGT 70
                556666666666666666666666642466666666665555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 968.53
//
Query:       MMETSP1325-20131115|4267_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.5   0.8      0.013   15.4   0.0    1.4  2  PF02109.11 DAD family
       0.04   13.4   0.0      0.063   12.8   0.0    1.3  1  PF09733.4  VEFS-Box of polycomb protein
       0.35    9.5   4.5       0.39    9.3   3.1    1.3  1  PF01757.17 Acyltransferase family


Domain annotation for each model (and alignments):
>> PF02109.11  DAD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1         2   9.2e+03      56      68 ..      40      52 ..      39      55 .. 0.64
   2 ?   15.4   0.0   2.8e-06     0.013      18      73 ..      86     141 ..      69     148 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 2
  PF02109.11 56 flsgfistvgqfv 68
                f  +f++t g +v
  MMETSP1325-20131115|4267_1 40 FAVAFLATAGVMV 52
                6666777777666 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 2.8e-06
  PF02109.11  18 kktpkklkliDafllflvlvgviqflycllvgtfPfnsflsgfistvgqfvltvsL 73 
                 +  ++ +kli af+    + g++  +++ lv ++P n +  g+ + v  + + ++L
  MMETSP1325-20131115|4267_1  86 DVDKETTKLIMAFVGLAAFAGLMCTVWMSLVMKYPENYITCGYYTYVCLVAVSAGL 141
                 4456889***********************************99999877777766 PP

>> PF09733.4  VEFS-Box of polycomb protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.4e-05     0.063      37      83 ..      73     119 ..      68     133 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.4e-05
   PF09733.4  37 lsdrDSEdevDddildleerqmldefvdvneeekrlmklWNlfvrkq 83 
                  s +DSE   Ddd +d e+++++  fv+ +  +  +  +W ++v+k+
  MMETSP1325-20131115|4267_1  73 TSSIDSELWGDDDDVDKETTKLIMAFVGLAAFAGLMCTVWMSLVMKY 119
                 6899*****************************************97 PP

>> PF01757.17  Acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.1   8.6e-05      0.39     222     276 ..      97     151 ..      38     153 .] 0.88

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 8.6e-05
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01757.17 222 kislllslallalillalfgqtdggglvasvliqsasllllslgimllllllfal 276
                  ++ l+++a+l +++++ ++++++ ++    +++++ l+++s+g+m+ + +++++
  MMETSP1325-20131115|4267_1  97 AFVGLAAFAGLMCTVWMSLVMKYPENYITCGYYTYVCLVAVSAGLMCTVWMSLVM 151
                 56678999999************************************99998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.69
# Mc/sec: 531.37
//
Query:       MMETSP1325-20131115|4265_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-17   62.2   0.0    7.7e-17   60.8   0.0    1.6  1  PF04928.12 Poly(A) polymerase central domain
    5.6e-05   22.5   0.0    7.1e-05   22.2   0.0    1.2  1  PF04926.10 Poly(A) polymerase predicted RNA binding domain


Domain annotation for each model (and alignments):
>> PF04928.12  Poly(A) polymerase central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.0   1.1e-20   7.7e-17      86     235 ..      39     193 ..      31     204 .. 0.83

  Alignments for each domain:
  == domain 1    score: 60.8 bits;  conditional E-value: 1.1e-20
                 xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF04928.12  86 svrslngvrvtdeilklvpnk..evFrtaLravklWakrrgiYsnvlgflgGvawaiLvarvcq...lyPnasast..........lvekfFrifsqWkwpePvlLkeieeeelqlkvwdprekksdrahlmpiitPayPsmnsthnvtkstlkvlleelkrake 235
                 sv  + gv  +  + ++v  +    Fr++ r vklWa+  g+Y++++g++gG+aw +Lva        +P+ + +             ++f  ++sq  w+ Pvl + +e              +    + m ++tPa   +n+t++vt+stl v+++el ra+ 
  MMETSP1325-20131115|4265_1  39 SVLVIEGVLDAVCLSECVGPQrlPLFRQLCRLVKLWASCAGVYGTAYGYPGGFAWCVLVAAFLNshhAQPAMTTAAagggsevlyeCFARFLDLYSQQAWHLPVLAEGVEGMG---------AVEGGTTAPMLVLTPARG-RNATRSVTRSTLAVVVSELRRASI 193
                 6777888999999999997775779***********************************9876111467766655778888766667789999**********986555543.........456778899*******85.79*******************975 PP

>> PF04926.10  Poly(A) polymerase predicted RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0     1e-08   7.1e-05       1      57 [.     223     279 ..     223     354 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 1e-08
                 -TTTS-S-EEEEEEEE---HHHHHH---HHHHHHHHHHHHHT-----B----SS-EE CS
  PF04926.10   1 dFFekYkhYlqvkasskteeahlkWsGlveSklRlLvqkLErvegialAhpfpkgfe 57 
                 dF e +  Y ++++s+ ++ a+ +  G+  S++  Lv  LErv+g+a  +p+ + ++
  MMETSP1325-20131115|4265_1 223 DFCEAFELYASIEMSAPSARAYAELVGFAVSRVVGLVVALERVPGVAAVRPWSSPIR 279
                 68999*******************************************9***88765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 1862.83
//
Query:       MMETSP1325-20131115|4270_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-06   25.8   0.0    6.3e-06   25.6   0.0    1.0  1  PF01612.15 3'-5' exonuclease


Domain annotation for each model (and alignments):
>> PF01612.15  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   4.6e-10   6.3e-06      40     139 ..       8     122 ..       3     123 .] 0.93

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 4.6e-10
                 BEEEEEEE-SSEEEEECTTTTTTT..........HHHHHHHHT-TTSEEEE--HHHHHHHHHHH.....-----SSEEEHHHHHHHCCHHCT.-SHHHHHHHHCS.---GCTTTTS CS
  PF01612.15  40 rlaliqigtkeeayiidpleledd..........lellkklledenitkVghnakfDlevlard.....fgielenlfdtmlaaavldyees.hsLasLaekllgeleldkeeqia 139
                   al q+ ++  ++++d ++l +            +l+ +l++++ i k g++  +Dl+vl+r          ++++++   a +vl++ e+  sL++ ++ +lg  +ldk+eq++
  MMETSP1325-20131115|4270_1   8 FAALLQVANHRSVWLFDLVALLQPgpgtpaaeafDGLFVALFDSQRIVKLGFGFAQDLRVLKRSfpfarAFQRVRSALEVGDALRVLKPAETgQSLSTACQGWLG-KKLDKTEQCS 122
                 678999999***********999999****9999999***************************99888888999999998899999999999************.*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 669.89
//
Query:       MMETSP1325-20131115|4268_1  [L=426]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.05   13.6   0.2       0.11   12.5   0.1    1.6  1  PF00536.25 SAM domain (Sterile alpha motif)
      0.071   12.9   0.6        1.9    8.3   0.0    2.4  2  PF03245.8  Bacteriophage lysis protein


Domain annotation for each model (and alignments):
>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.7e-05      0.11      12      46 ..     288     323 ..     286     337 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.7e-05
                 HHHTT-GGGHHHH.HCT--SHHHHTT--HHHHHHH- CS
  PF00536.25  12 LesiglgqYvdnF.rageidgdallllteedLeklg 46 
                 L+s+ l++Y++   r+ + ++++l++lt+ +   lg
  MMETSP1325-20131115|4268_1 288 LKSLNLQHYAHALeRERFENIEELMELTDTEVTTLG 323
                 99***************************9954444 PP

>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00028       1.9      42      92 ..     324     374 ..     291     378 .. 0.81
   2 ?    2.4   0.1     0.019   1.3e+02      75     100 ..     386     411 ..     379     421 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00028
   PF03245.8  42 eeLadaksendrLradvaaGrrRLr..vkatCpavpeaasaaglgdaasarLs 92 
                 ++L+  + e  rLr+ +++Gr R++  ++a +p   ++++a++ g  as+ L+
  MMETSP1325-20131115|4268_1 324 KDLNMKRGELMRLRRWLREGRARINngIQALAPL--TSTAAGRPGAIASPGLA 374
                 799999*******************999999997..66666666666666665 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.019
   PF03245.8  75 peaasaaglgdaasarLsdaaerdyl 100
                 + ++sa+gl d++sa L ++a+   +
  MMETSP1325-20131115|4268_1 386 KGSGSARGLTDEGSAGLRAQAKHTGV 411
                 6789***************9987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      478  (0.034962); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.38s 00:00:01.14 Elapsed: 00:00:00.82
# Mc/sec: 1244.94
//
Query:       MMETSP1325-20131115|4269_1  [L=495]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-05   22.8   5.7    2.7e-05   22.4   4.0    1.1  1  PF06011.7  Transient receptor potential (TRP) ion channel
     0.0026   16.6   0.8     0.0042   16.0   0.5    1.2  1  PF14351.1  Domain of unknown function (DUF4401)
  ------ inclusion threshold ------
      0.023   13.9   0.4      0.077   12.2   0.3    1.9  2  PF13567.1  Domain of unknown function (DUF4131)
      0.042   12.7   0.3      0.065   12.1   0.2    1.2  1  PF03419.8  Sporulation factor SpoIIGA
      0.066   13.0   4.2       0.15   11.9   2.9    1.6  1  PF13515.1  Fusaric acid resistance protein-like
       0.11   12.0   0.0       0.25   10.8   0.0    1.6  1  PF01191.14 RNA polymerase Rpb5, C-terminal domain


Domain annotation for each model (and alignments):
>> PF06011.7  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   4.0   1.2e-08   2.7e-05     407     516 ..      92     200 ..       4     209 .. 0.72

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 1.2e-08
   PF06011.7 407 arksvrlkknkaslLytdlktllkyGflYnqyradavwfvivdlaylfvr.slfIgllqssGiaQvvallviEllylilllwirPymdkrsnalniiisvvrlltallsla 516
                 +++  rl++++ + L   +++++ +GflY qy++  +wf +v+    ++  +l++ l+ + ++ Q  + + i +  + +++++rPy+++    + ++  v +++t +  ++
  MMETSP1325-20131115|4269_1  92 IKNGYRLNEQQLYQLRATDPVTRSFGFLYSQYNDRNYWFEVVECGRKMLLcGLVVLLAPGTPS-QYTLCMLIFFCLFTFIAYFRPYHSNLDSQIALVCYVTTFVTYVV-TF 200
                 45555666777888888899************************9865551666655555665.55555555577788999*******99887777666666665544.33 PP

>> PF14351.1  Domain of unknown function (DUF4401)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.5   1.8e-06    0.0042      94     202 ..     140     245 ..     136     260 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.8e-06
   PF14351.1  94 lilallyflrpdvllrfLsavllllallvllaelllsglissn..lelallllalllgllllnlalkeill...eaarrsalleplayglllsllaillvlsgnslllgltalf 202
                 l+  l+++l p    ++ +++l+ ++l+ ++a++  +++   n   ++al+ +++ ++  ++++     l+   e ++  a+l p+  + ll+++++l +l+g ++++++++++
  MMETSP1325-20131115|4269_1 140 LLCGLVVLLAPGTPSQYTLCMLIFFCLFTFIAYFRPYHS---NldSQIALVCYVTTFVTYVVTF-----LIsyeEDGKGVAKLPPWSISALLFAATMLPLLAGLQCFYEQASDQ 245
                 6677889999999999999*****************654...4343333333333333332222.....2234599******************************99933333 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.2   2.8e+03      77     101 ..      85     108 ..      41     114 .. 0.61
   2 ?   12.2   0.3   3.4e-05     0.077       2      70 ..     142     251 ..     140     275 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.2
   PF13567.1  77 evtveGvvestprvtgsgrrfvlkv 101
                  + ++G + +  r+++++  ++l++
  MMETSP1325-20131115|4269_1  85 YTYYRGHIKNGYRLNEQQL-YQLRA 108
                 3347778888888887777.66665 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 3.4e-05
   PF13567.1   2 lGillaalaslplgllllalllalllllllflkr.........................................rkrrrlllllglllllaglylllrapqpssndlsr 70 
                 +G+++   ++ p+++ l +l++++l++++ +++                                          ++ + ll+++++l llagl +++ +++ +++ + +
  MMETSP1325-20131115|4269_1 142 CGLVVLLAPGTPSQYTLCMLIFFCLFTFIAYFRPyhsnldsqialvcyvttfvtyvvtflisyeedgkgvaklppWSISALLFAATMLPLLAGLQCFYEQASDQYKAYKQ 251
                 78888888999999999999999999999998889999999999999999999999999999999999888877777777778888888888888877777777665555 PP

>> PF03419.8  Sporulation factor SpoIIGA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   2.9e-05     0.065      48     158 ..     145     260 ..     141     275 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.9e-05
   PF03419.8  48 lvlliplleilltllvkllvsvvivliafgkkrlkkflktllvfylvtflfgGalfalhyllktksvvkngivlt.....pvswkflliglailyiiikrlveyikkkkikekllv 158
                 +vll+p+ +  +tl + + + ++ +++ f++ +     +  lv y+ tf++  ++f+++y    k+v k             +++ ll+gl ++y   +  ++ +k+kk + ++ +
  MMETSP1325-20131115|4269_1 145 VVLLAPGTPSQYTLCMLIFFCLFTFIAYFRPYHSNLDSQIALVCYVTTFVTYVVTFLISYEEDGKGVAKLPPWSIsallfAATMLPLLAGLQCFYEQASDQYKAYKQKKRHFNNAI 260
                 5667799998787777777777777777999999999************************9999997765444456676778888888888888888888888888888777665 PP

>> PF13515.1  Fusaric acid resistance protein-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.9   6.4e-05      0.15      49      99 ..     142     204 ..     139     235 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.4e-05
   PF13515.1  49 lallllallpgn..lalillvfll.aflillfkkrny.........alafifltllalllyal 99 
                 ++l++l++  ++  + l++l+f++ +++i++f+ +++          + ++f+t+++++l+++
  MMETSP1325-20131115|4269_1 142 CGLVVLLAPGTPsqYTLCMLIFFClFTFIAYFRPYHSnldsqialvCYVTTFVTYVVTFLISY 204
                 555555444444448888666555266668999988755554433334445566777777766 PP

>> PF01191.14  RNA polymerase Rpb5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00011      0.25      23      49 ..      92     118 ..      81     122 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00011
                 HHHH----TTSSS---TT-TTTTTTT- CS
  PF01191.14  23 llkeykikeeqLPrilstDPiarylgl 49 
                 + + y+++e+qL ++++tDP+ r +g+
  MMETSP1325-20131115|4269_1  92 IKNGYRLNEQQLYQLRATDPVTRSFGF 118
                 66789******************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       777  (0.0568315); expected 273.4 (0.02)
Passed bias filter:                      552  (0.0403745); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.95u 0.38s 00:00:01.33 Elapsed: 00:00:00.70
# Mc/sec: 1694.57
//
Query:       MMETSP1325-20131115|4274_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-33  113.3   0.0      7e-33  113.1   0.0    1.0  1  PF00071.17 Ras family
    1.5e-19   70.5   0.0    1.7e-19   70.3   0.0    1.0  1  PF08477.8  Miro-like protein
    5.8e-11   41.8   0.0    6.8e-11   41.6   0.0    1.0  1  PF00025.16 ADP-ribosylation factor family
    0.00097   18.2   0.0     0.0011   18.0   0.0    1.0  1  PF04670.7  Gtr1/RagA G protein conserved region
     0.0016   17.7   0.0     0.0022   17.3   0.0    1.3  1  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.096   11.8   0.0        0.1   11.7   0.0    1.1  1  PF13204.1  Protein of unknown function (DUF4038)


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.1   0.0   3.1e-36     7e-33       9     138 ..       2     129 ..       1     130 [] 0.97

  Alignments for each domain:
  == domain 1    score: 113.1 bits;  conditional E-value: 3.1e-36
                 ----HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE CS
  PF00071.17   9 avGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkf 138
                 + GK++l+ rf e++F ++y+sTigvd  +k  +vdg ++k++ wD  G  ef  +r+ +y+da+g+llv+d+t+++sf+ ++ wv+e k++  ++ p+v+++nKvD +  ra++++eg+e+a++lg+++
  MMETSP1325-20131115|4274_1   2 GSGKSCLIKRFCEGRFVSKYISTIGVDYGVKPHTVDGVTLKMNFWDLSGSPEFFDVRNEFYKDAQGCLLVFDVTDQSSFDALDGWVQEAKKYGLKSAPVVVCANKVDQK--RAITEREGREWADSLGYAY 129
                 67********************************************************************************************9************76..8*************99988 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0   7.6e-23   1.7e-19       9     119 .]       2     108 ..       1     108 [. 0.97

  Alignments for each domain:
  == domain 1    score: 70.3 bits;  conditional E-value: 7.6e-23
   PF08477.8   9 gvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                 g+GKs l+++++++ f+  + +  ++g +++vk  +vd+ t ++++wdl+g++e+    + + k+a++ llv+d+td++s++ +     w +e++k+g k  pv++++nk D
  MMETSP1325-20131115|4274_1   2 GSGKSCLIKRFCEGRFV--SKYISTIGVDYGVKPHTVDGVTLKMNFWDLSGSPEFFDVRNEFYKDAQGCLLVFDVTDQSSFDAL---DGWVQEAKKYGLKsAPVVVCANKVD 108
                 89***************..99************************************99************************8...679**********9*********98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0     3e-14   6.8e-11      25     138 ..       3     120 ..       1     125 [. 0.88

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 3e-14
                 ---HHHHHHHHHS-EEE.E-S--S-EE....EEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHH CS
  PF00025.16  25 aGKtTilkklkleelvt.tvPTigfnv....eeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelre 138
                 +GK+ ++k++ ++++v+  + Tig +     +++   +lk+++wD+ G  +   + ++++++ ++ + v D++d++ ++     +++  ++  lk+++++v aNK D + a++e+e re
  MMETSP1325-20131115|4274_1   3 SGKSCLIKRFCEGRFVSkYISTIGVDYgvkpHTVDGVTLKMNFWDLSGSPEFFDVRNEFYKDAQGCLLVFDVTDQSSFDALDGWVQE-AKKYGLKSAPVVVCANKVDQKRAITEREGRE 120
                 8***********99886578898764322228999999****************************************998888777.57889********************998765 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   4.8e-07    0.0011       9     123 ..       2     109 ..       1     123 [. 0.84

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 4.8e-07
   PF04670.7   9 gsGKtSmrsiiFsn.ylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqys.peakvfvlihKmDl 123
                 gsGK+++ +   +  ++ + + ++g+   v+ ++v     lk+n wD+ G  ef++      ++e +++ +  + VfD++  + +++++ +   ++ +++y  + a v v  +K+D 
  MMETSP1325-20131115|4274_1   2 GSGKSCLIKRFCEGrFVSKYISTIGVDYGVKPHTVD-GVTLKMNFWDLSGSPEFFDV-----RNEFYKDAQGCLLVFDVT--D-QSSFDALDGWVQEAKKYGlKSAPVVVCANKVDQ 109
                 89****999988862567778899999999999997.5569***************9.....799***************..4.788999999999999996356778888888885 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   9.7e-07    0.0022      67     141 ..      38     116 ..      14     129 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 9.7e-07
                 ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-S-HHH.HHHHHHHHHTT--...EEEEEE-TTSTCHHHHH CS
  PF00009.22  67 tkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqT.eevlrlakklgvk...iivviNKiDrveaelee 141
                 + + ++n+ D  G  +F +   +  + + g++lv+d+++          ++ akk+g+k   ++v+ NK+D+ +a  e+
  MMETSP1325-20131115|4274_1  38 GVTLKMNFWDLSGSPEFFDVRNEFYKDAQGCLLVFDVTDQSSFDAlDGWVQEAKKYGLKsapVVVCANKVDQKRAITER 116
                 5567899*******************************997666515566789****99998999******98655444 PP

>> PF13204.1  Protein of unknown function (DUF4038)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.5e-05       0.1      77     128 ..      70     115 ..      40     130 .] 0.74

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.5e-05
   PF13204.1  77 ldltklneeYfdhvdkiveeaeekGlvialvplwgskvvketwgsksellpe 128
                 l ++  +++ fd++d  v+ea+++Gl  a v++ ++kv ++        ++e
  MMETSP1325-20131115|4274_1  70 LVFDVTDQSSFDALDGWVQEAKKYGLKSAPVVVCANKVDQKR------AITE 115
                 6677788999************************99996663......4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 556.30
//
Query:       MMETSP1325-20131115|4271_1  [L=635]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-21   75.2   0.2    1.4e-20   74.0   0.1    1.6  1  PF02338.14 OTU-like cysteine protease
    1.2e-05   24.6  12.6    2.4e-05   23.6   8.7    1.5  1  PF02810.10 SEC-C motif
     0.0061   15.9   0.0     0.0099   15.2   0.0    1.3  1  PF02845.11 CUE domain
  ------ inclusion threshold ------
      0.041   13.1   0.1       0.45    9.7   0.0    2.1  2  PF10275.4  Peptidase C65 Otubain


Domain annotation for each model (and alignments):
>> PF02338.14  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   0.1     4e-24   1.4e-20       1     126 []     112     225 ..     112     225 .. 0.85

  Alignments for each domain:
  == domain 1    score: 74.0 bits;  conditional E-value: 4e-24
                 -----HHHHHHHHHH-----HHHHHHHHHHSS--HHHH-------------..............-HHHHHHHHHHHHHHTS-EEE-----------------B--TTS-GGGS--S-EEE--BTTB- CS
  PF02338.14   1 pgDGnCLfhavsqqlwldhdgrkekheelrealveylrehrelfeefleeee..eeYlkeiskdgewgeeieifalahilrrpiivlkssggealvyikfggkylplekppsiclsspgvlgydgaHy 126
                 +gDGnC+f+++++ql     g+  kh e r a+++y+   re+fe+f+e++e  + Y++++ +dgewg++ e+fa+++++++++++ +   ++  +  +      p+     +++s++g     + Hy
  MMETSP1325-20131115|4271_1 112 KGDGNCMFRSIADQLE----GNPTKHAEYRAAIMQYIYDRREDFEPFMEDDEkfDAYIARMGRDGEWGGHQELFAASQHYNCNFVIHQLAAPRFEIHAP-----IPSLARATLHMSYHG-----EMHY 225
                 69**************....9999****************************99********************************3334343222222.....256777778888887.....7777 PP

>> PF02810.10  SEC-C motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   8.7   6.9e-09   2.4e-05       5      20 ..     445     460 ..     442     461 .. 0.93

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 6.9e-09
  PF02810.10   5 CPCGSGkKYKkCCgpy 20 
                 CPCGSG KYKkCC + 
  MMETSP1325-20131115|4271_1 445 CPCGSGIKYKKCCRKK 460
                 *************985 PP

>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   2.9e-06    0.0099      13      38 ..     285     310 ..     285     313 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 2.9e-06
                 TTS-HHHHHHHHHHSTTTHHHHHHHH CS
  PF02845.11  13 PdldeevIravLrasngnvEaainaL 38 
                 Pd ++e+Ir+vLr+  g+ Eaai+ L
  MMETSP1325-20131115|4271_1 285 PDATPEQIRSVLRDVAGDAEAAIELL 310
                 999********************988 PP

>> PF10275.4  Peptidase C65 Otubain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00013      0.45      45      58 ..     110     123 ..      55     127 .. 0.84
   2 ?    1.0   0.0     0.058     2e+02     143     171 ..     137     163 ..     134     170 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00013
   PF10275.4  45 rvrgDGnCfYrafa 58 
                  v+gDGnC +r++a
  MMETSP1325-20131115|4271_1 110 VVKGDGNCMFRSIA 123
                 699*********97 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.058
   PF10275.4 143 Rlltsaeikenadeykpfideldlltvee 171
                 R  + ++i++++++++pf++++  ++ ++
  MMETSP1325-20131115|4271_1 137 RAAIMQYIYDRREDFEPFMEDD--EKFDA 163
                 778899*************876..55555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1212  (0.0886483); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.19u 0.39s 00:00:01.58 Elapsed: 00:00:00.75
# Mc/sec: 2028.92
//
Query:       MMETSP1325-20131115|4275_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-08   32.2   0.0    9.1e-08   32.2   0.0    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
      7e-06   25.4   0.0      0.053   13.2   0.0    2.0  2  PF00023.25 Ankyrin repeat
    0.00043   20.1   0.0       0.39   10.9   0.0    2.1  2  PF13606.1  Ankyrin repeat
     0.0047   17.0   0.1      0.094   12.8   0.0    2.0  2  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.012   15.9   0.0      0.027   14.8   0.0    1.5  2  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   3.3e-11   9.1e-08      37      86 ..       1      50 [.       1      53 [. 0.95

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 3.3e-11
   PF12796.2 37 gnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86
                g++e+v++L e ga+v+ ++k  +tp ++ +rng  elv+lL   +a+v 
  MMETSP1325-20131115|4275_1  1 GHVEVVRVLHELGANVEFQNKILETPVFVSARNGYDELVRLLHRLKANVG 50
                89*****************************************9999985 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   1.9e-05     0.053      13      33 .]       1      21 [.       1      21 [. 0.94
   2 !   10.8   0.0   0.00011       0.3       3      29 ..      24      50 ..      23      54 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.9e-05
                THHHHHHHHHHTTSSTTHBHT CS
  PF00023.25 13 gnlevvklLlsqGAdlnaqdd 33
                g++evv+ L + GA++  q++
  MMETSP1325-20131115|4275_1  1 GHVEVVRVLHELGANVEFQNK 21
                89**************99986 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00011
                CBHHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25  3 fTPLHlAalrgnlevvklLlsqGAdln 29
                +TP  + a++g+ e v+lL    A++ 
  MMETSP1325-20131115|4275_1 24 ETPVFVSARNGYDELVRLLHRLKANVG 50
                59999*******************996 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0018       4.9      13      28 ..       1      16 [.       1      18 [. 0.93
   2 !   10.9   0.0   0.00014      0.39       3      28 ..      24      49 ..      23      51 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0018
   PF13606.1 13 grielveaLlengadi 28
                g++e+v+ L e ga++
  MMETSP1325-20131115|4275_1  1 GHVEVVRVLHELGANV 16
                79************98 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00014
   PF13606.1  3 nTpLhlAasngrielveaLlengadi 28
                +Tp ++ a+ng  elv++L +  a++
  MMETSP1325-20131115|4275_1 24 ETPVFVSARNGYDELVRLLHRLKANV 49
                7******************9988876 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0     0.002       5.5      27      47 ..       1      21 [.       1      29 [. 0.78
   2 !   12.8   0.0   3.4e-05     0.094       1      46 [.       9      53 ..       9      55 .] 0.87

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.002
   PF13857.1 27 galevvrlLlapgadlnlrds 47
                g++evvr L++ ga+   +++
  MMETSP1325-20131115|4275_1  1 GHVEVVRVLHELGANVEFQNK 21
                89********99998765555 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 3.4e-05
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrd 46
                L+e g a+v  +++  +tp  + a++g+ e+vrlL++  a+ ++ +
  MMETSP1325-20131115|4275_1  9 LHELG-ANVEFQNKILETPVFVSARNGYDELVRLLHRLKANVGTPN 53
                78899.9999999999********************7776666655 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   9.9e-06     0.027      12      54 .]       1      43 [.       1      45 [. 0.92
   2 ?    5.9   0.0    0.0063        17       3      27 ..      25      49 ..      23      54 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 9.9e-06
   PF13637.1 12 grlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                g++e+v+ L+e g+++  +++  +t++ + a++g+ e+++lL+
  MMETSP1325-20131115|4275_1  1 GHVEVVRVLHELGANVEFQNKILETPVFVSARNGYDELVRLLH 43
                89**************999**9************988888875 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0063
   PF13637.1  3 taLhyaaisgrlelvklLlekgidi 27
                t++++ a+ g  elv+lL+  ++++
  MMETSP1325-20131115|4275_1 25 TPVFVSARNGYDELVRLLHRLKANV 49
                6788889999999999998667775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 263.60
//
Query:       MMETSP1325-20131115|4276_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1306.25
//
Query:       MMETSP1325-20131115|4277_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 791.65
//
Query:       MMETSP1325-20131115|4272_1  [L=410]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   7.3e-107  356.4   0.0   8.8e-107  356.1   0.0    1.0  1  PF00676.15 Dehydrogenase E1 component
    6.6e-19   67.2   2.0    7.7e-19   66.9   0.4    1.9  2  PF00364.17 Biotin-requiring enzyme
    4.2e-05   22.4   0.0    7.4e-05   21.6   0.0    1.4  1  PF13292.1  1-deoxy-D-xylulose-5-phosphate synthase
    0.00011   21.7   0.8    0.00026   20.4   0.5    1.6  1  PF02775.16 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
     0.0031   17.0   0.0     0.0071   15.8   0.0    1.6  1  PF13533.1  Biotin-lipoyl like
     0.0082   14.8   0.0      0.011   14.3   0.0    1.1  1  PF00456.16 Transketolase, thiamine diphosphate binding domain


Domain annotation for each model (and alignments):
>> PF00676.15  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  356.1   0.0  3.9e-110  8.8e-107       2     299 ..      31     328 ..      30     329 .. 0.98

  Alignments for each domain:
  == domain 1    score: 356.1 bits;  conditional E-value: 3.9e-110
                 HHHHHHHHHHHHHHHHHHTTSSS--------HHHHHHHHHCS-TTSEEE--SS-HHHHHHTT--HHHHHHHHHT-T....T-TT----TT---BTT--B----S--SHHTTHHH--HHHHHH------EEEEE----TTSHHHHHHHHHHHHCT--EEEEEEE-SEETTECGGHC-S-S-CGGGGGG---EEEEE----HHHHHHHHHHHHHHHH-----EEEEEE-------STT--GGGTS-CHHHHHHHHCC-HHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHHHHTS----H CS
  PF00676.15   2 klmllrrmedalaalykrkkrigfvhlsagqealqvgiaaalekeDlvistYRehgvllargvsleevlaeltgke....kgkggsmheisyaekksrflggngivgaqvplvaGialaakyegkkevailliGDGatnqGqffealnlAalwklpvifvveNNqyaisteaerssaskelakkargvgipgirVdGnDvlAvyqAvkeAaeraregkgPvLielvtYRyggHsesDdpstyrtreeveevrkkkdpikrlkehlvkkgvvseeelkeiekevrkeieeavkkaeekkepev 299
                 ++ l+rr+e+++ +ly   k+ gf+hl+ gqea+ +g++a l+++D vi++YR+hg++la +++++ v+aeltg++    +gkggsmh +++ ek+  f+gg+givgaqvp+++G+a+  ky gk++v+++++GDGa+nqGq++ea+n+A+lw+lpv++v+eNN+ya++t+ +r ++ +el+k+++ ++i g +VdG+Dv Av++A + A+++ar+gkgP ++e+ tYRy+gHs+sD p +yr+reev++vr+++dpi +lke+++++g+++e+ lk+i+ke+r+++++a +++ e++ep++
  MMETSP1325-20131115|4272_1  31 DMLLIRRFEERAGQLYGMGKIAGFCHLYIGQEAVVTGMQACLKDGDQVITGYRDHGHMLACDLDPKGVMAELTGRAgglsRGKGGSMH-MFSREKN--FFGGHGIVGAQVPIGTGLAFSNKYLGKDNVCLAYFGDGAANQGQVYEAFNMASLWDLPVVYVIENNMYAMGTSIARHASETELYKRGISFEIKGEEVDGMDVYAVKKAGERAVKHARSGKGPYILEMKTYRYRGHSMSD-PAKYRKREEVDDVRSHHDPIDGLKEQIIEAGLATEADLKAIDKEIRAIVKDAADFSLESPEPDP 328
                 799*************************************************************************************.8866666..*******************************************************************************************************************************************.788999******************************************************9987 PP

>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.3   2.9e+03      16      30 ..      66      80 ..      61      81 .. 0.72
   2 !   66.9   0.4   3.4e-22   7.7e-19       2      63 ..     347     408 ..     346     410 .] 0.97

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.3
                -ECCESS-------C CS
  PF00364.17 16 tvvevlvkvGdkVka 30
                t ++   k+Gd+V  
  MMETSP1325-20131115|4272_1 66 TGMQACLKDGDQVIT 80
                466778899999865 PP

  == domain 2    score: 66.9 bits;  conditional E-value: 3.4e-22
                 EES-S----EEEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEESS-TT- CS
  PF00364.17   2 eiksPmiGesvkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGd 63 
                 +i +P+++ +++egt +++l+ +Gdk++ag+++ae+e++K++me+ea ++G++++il++eG+
  MMETSP1325-20131115|4272_1 347 DILMPALSPTMEEGTLAKWLKGEGDKIEAGDIIAEIETDKATMEVEAVDEGTLAKILIPEGT 408
                 689**********************************************************7 PP

>> PF13292.1  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   3.3e-08   7.4e-05     113     181 ..     133     201 ..     102     264 .. 0.74

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 3.3e-08
   PF13292.1 113 sstsisaalGlakardlkgekekvvaviGDgaltgGmafealnnagelkkklivilNdNemsisenvga 181
                  ++ + + +Gla ++++ g+++ ++a  GDga   G  +ea+n a+  +  ++ ++ +N  ++ +++  
  MMETSP1325-20131115|4272_1 133 VGAQVPIGTGLAFSNKYLGKDNVCLAYFGDGAANQGQVYEAFNMASLWDLPVVYVIENNMYAMGTSIAR 201
                 466788899**********************************************99998877765554 PP

>> PF02775.16  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.5   1.2e-07   0.00026      16     152 ..     121     251 ..     113     252 .. 0.67

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 1.2e-07
                 STT-EEEE--SS-----HHCCCHHHCC....TSTTS-EEEEE----TTTT.GGGHHHHHHC.T--EEEEEEE-SB---HHHHHHHH-SS--GGGCB..-----HHHHHCC-.--EEEEESSH..HHHHHHHHHHHCSSS-EEEE CS
  PF02775.16  16 krprsyltsgglgtmGyglpaAiGakl....akpdrevvaivGDGgflmi.lqelatavrr.nlpitvvvlnNegygmtggqqepfggkrksgpdgkklkpvdfaklaeal.Gakgarvekadveeleealkealekkgpalie 152
                 +r ++++   g+g  G ++p+++G ++    + +d+   a+ GDG+     + e  +++   +lp+++v+ nN + + t    +       ++ +   ++ ++f+   e + G++++   ++  +  e+a+k a++ kgp ++e
  MMETSP1325-20131115|4272_1 121 SREKNFFG--GHGIVGAQVPIGTGLAFsnkyLGKDNVCLAYFGDGAANQGqVYEAFNMASLwDLPVVYVIENNMYAMGTSIARHASE----TELY---KRGISFEIKGEEVdGMDVYA--VK--KAGERAVKHARSGKGPYILE 251
                 45666666..*****************7644334778899******88877777777777647799999988877766655533322....2222...45566665555554555555..45..55788888888888888776 PP

>> PF13533.1  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   3.1e-06    0.0071      10      46 ..     359     395 ..     348     400 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3.1e-06
   PF13533.1  10 sGrVeevlVkeGqeVkkGDvLleldsekleaaleqak 46 
                  G+++++l  eG+  ++GD+++e++ +k   ++e++ 
  MMETSP1325-20131115|4272_1 359 EGTLAKWLKGEGDKIEAGDIIAEIETDKATMEVEAVD 395
                 69999********************999877776665 PP

>> PF00456.16  Transketolase, thiamine diphosphate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0     5e-06     0.011     144     249 ..     153     260 ..     141     289 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 5e-06
                 S--EEEEE----TT---HHHHHHHHHHTT-TTEEEEEEE-S----S-GCCTT-CHHHHHHHH---EEEEE.E----HHHHHHHHHHHCCST...TS-EEEEEE------- CS
  PF00456.16 144 dhyvyvllgDgclmEGvssEaislagvlkLgkLialyDdNkisidgeteisftedvakrfeaygWhviev.edgedveeiakAieeAkaek...dkPtlikvktviGfgs 249
                 d+   +  gDg  + G ++Ea ++a++  L  + +   +N++   g++   ++++++   + + +++  +  dg dv +++kA e+A ++    + P ++++kt   +g 
  MMETSP1325-20131115|4272_1 153 DNVCLAYFGDGAANQGQVYEAFNMASLWDLPVVYV--IENNMYAMGTSIARHASETELYKRGISFEIKGEeVDGMDVYAVKKAGERAVKHArsgKGPYILEMKTYRYRGH 260
                 66777889*******************99974444..36777777777777777776666677777776557********998777643321115699999999876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.51
# Mc/sec: 1926.48
//
Query:       MMETSP1325-20131115|4279_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 727.17
//
Query:       MMETSP1325-20131115|4280_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.036   13.9   0.2        8.9    6.6   0.0    2.5  2  PF00560.28 Leucine Rich Repeat
      0.051   13.5   0.2        6.4    7.0   0.0    2.5  2  PF13516.1  Leucine Rich repeat
       0.14   11.7   0.7       0.72    9.4   0.6    2.1  2  PF12799.2  Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.002       8.9       2      15 ..      10      36 ..       9      43 .. 0.70
   2 ?    5.8   0.0    0.0035        16       2      16 ..      40      56 ..      39      61 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.002
                ESEEEETSSBCB.C............H CS
  PF00560.28  2 LeeLdLsgNnlt.s............l 15
                Le+L++ ++ +  +            l
  MMETSP1325-20131115|4280_1 10 LEVLNMEYCGFNrNtgeskitgnikdL 36
                99*******998446666644444444 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0035
                ESEEEETSS.BCB.CHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slp 16
                ++ L+L ++ +l+ +l 
  MMETSP1325-20131115|4280_1 40 ITDLNLAHCkKLEgNLE 56
                678******99997765 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0    0.0096        44       4      15 ..      10      21 ..       9      36 .. 0.87
   2 ?    7.0   0.0    0.0014       6.4       2      13 ..      38      49 ..      37      57 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0096
   PF13516.1  4 LtsLdLsnNqig 15
                L++L++ ++++ 
  MMETSP1325-20131115|4280_1 10 LEVLNMEYCGFN 21
                89*****99975 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0014
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L +++
  MMETSP1325-20131115|4280_1 38 QSITDLNLAHCK 49
                689********8 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.011        51      26      36 ..      10      20 ..       1      37 [. 0.59
   2 ?    9.4   0.6   0.00016      0.72       3      26 ..      10      51 ..      10      60 .. 0.56

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.011
   PF12799.2 26 LktLnLsnNpi 36
                L++Ln++++ +
  MMETSP1325-20131115|4280_1 10 LEVLNMEYCGF 20
                66666665544 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00016
   PF12799.2  3 LevLdLsnN.............nIkdlppe.....lanLpnL 26
                LevL+  ++             nIkdlp +     la +++L
  MMETSP1325-20131115|4280_1 10 LEVLNMEYCgfnrntgeskitgNIKDLPQSitdlnLAHCKKL 51
                788886666333445555555566666655334444444554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.59
# Mc/sec: 255.88
//
Query:       MMETSP1325-20131115|4278_1  [L=639]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-32  110.5  17.4    2.6e-23   82.0   7.3    2.4  2  PF01699.19 Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.4   3.5e-12   4.8e-08      43     138 ..       2     110 ..       1     111 [. 0.89
   2 !   82.0   7.3   1.9e-27   2.6e-23       5     138 ..     488     629 ..     483     630 .. 0.80

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 3.5e-12
  PF01699.19  43 issiiaalkgagdlalgsivGSalfnlllviglcvlisplgekriqkvlvfkvtldfsflllvllllllivll.................sdgrltvweglvllllyilylvl 138
                 +++ ++++  + +l++g+i+GS +fn l++ + +vl+s  ge    +++ + + ++++f++l++  ll+                     ++  +++w++l+l++ y++y+v+
  MMETSP1325-20131115|4278_1   2 FAAFVSLFITHTSLGIGTIIGSEIFNHLCICAGSVLYSKSGEL---TLDPRILAREVVFYALAIGGLLFSE-SytegkdgpnyddgigddKRIFIHWWQALLLIVGYLMYVVV 110
                 67888899999*****************************975...9999999999999999955444444.369*************8888889****************98 PP

  == domain 2    score: 82.0 bits;  conditional E-value: 1.9e-27
  PF01699.19   5 lladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkgagdlalgsivGSalfnlllviglcvlisplgekr........iqkvlvfkvtldfsflllvllllllivll...sdgrltvweglvllllyilylvl 138
                 + + +++ ++e++a+ +g+s+tv+glt+ A+gts+p +++s+i+a++g g++a+g+++GS++fn+++++g++++++ ++  +           +++   ++ f++l+l++ll+l+i+ l   + ++l    + ++++lyi +lv+
  MMETSP1325-20131115|4278_1 488 CWSFLMSVTVENLAEWVGISQTVAGLTISAAGTSFPNILASMIVARQGMGNMAVGNAFGSNVFNVFMGLGFPWFLYCFFGDSdvhqeshtYHGLDK--DGVIFPTLVLLALLILFII-LlwcTNMKLYTYHAYMFIALYIGFLVW 629
                 567789999********************************************************************9977799986543222222..2222333333322222222.1467*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       964  (0.0705091); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.05u 0.36s 00:00:01.41 Elapsed: 00:00:00.56
# Mc/sec: 2734.41
//
Query:       MMETSP1325-20131115|4281_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.19   11.4   0.0    1.4  1  PF04566.8 RNA polymerase Rpb2, domain 4
       0.66    9.8   4.9       0.98    9.2   3.4    1.2  1  PF14265.1 Domain of unknown function (DUF4355)


Domain annotation for each model (and alignments):
>> PF04566.8  RNA polymerase Rpb2, domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.7e-05      0.19      12      51 ..      34      77 ..      26      80 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.7e-05
                SSHHHHHHHH..HHHHH-----TTSEEEE..ETTTTEEEEE--- CS
   PF04566.8 12 rnpeeLvetl..RelRRkgkiseevsvvr..neeekeiristDa 51
                ++ eeL+++l  +e+RRk  +s +v ++   ++++++++ +tD+
  MMETSP1325-20131115|4281_1 34 EDVEELMAELaaKEMRRKAAESMYVEIYAhlDDHHEQLKEHTDG 77
                567899999855789*******9999975226777888888886 PP

>> PF14265.1  Domain of unknown function (DUF4355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.4   0.00014      0.98      36      76 ..      14      54 ..       2      57 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00014
   PF14265.1 36 eklakmsaeekaekeleklkkeleelkaelarrelkaeakk 76
                e+++ m   e+++  ++ +k++ eel aela +e++ +a++
  MMETSP1325-20131115|4281_1 14 ERVEAMDTPEQRALHAQHEKEDVEELMAELAAKEMRRKAAE 54
                7899999999999***********************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1132  (0.082797); expected 273.4 (0.02)
Passed bias filter:                      772  (0.0564658); expected 273.4 (0.02)
Passed Vit filter:                        76  (0.00555881); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.61
# Mc/sec: 353.56
//
Query:       MMETSP1325-20131115|4282_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.45
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|4273_1  [L=595]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-08   33.6   0.0    4.2e-08   32.9   0.0    1.3  1  PF03031.13 NLI interacting factor-like phosphatase
  ------ inclusion threshold ------
      0.041   12.6   0.5      0.073   11.8   0.3    1.4  1  PF04321.12 RmlD substrate binding domain


Domain annotation for each model (and alignments):
>> PF03031.13  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   6.2e-12   4.2e-08       2     128 ..     385     539 ..     384     561 .. 0.65

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 6.2e-12
  PF03031.13   2 tLVLDLDet........Lvhsk.sekdee........eektkasvkk...RPgldeFLkelska......yevviftasske..yadavldkldpkkklf....kkrlyresctleng.ky.vKdLsllgrdlskvvivDdsprsfelqpdnlipiepfyg 128
                 +LVLD Det        L+ s+      +        ++  + ++kk   RPgl+++++++++         +v++ta+s++  ++  + + l++   ++    +++l+ e++t + +    +KdL++l++d s +v+vDd+p  +  q+  ++++ ++ +
  MMETSP1325-20131115|4273_1 385 CLVLDNDETtgayqlgsLLFSMfV----NlcatpppvDYFVERYLKKggaRPGLAQLIQTAAELkasgriEHIVVWTAASNRngWVTFLSQCLERLAGVVpgtiDRVLTCEHSTKRHRtGRvIKDLRVLTTDTSGIVMVDDKPSFV--QHGRVVQVNEYTQ 539
                 899999999555555554444430....1333444331233344444677*******998866556666689*******96522455555555533333334449999888888555533326*******************9844..5566666666655 PP

>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   1.1e-05     0.073     204     254 ..     197     251 ..     169     254 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.1e-05
                 ...---EE---B----HHHHHHHHHHH-----.....EEEEE-GGGS--SS---S CS
  PF04321.12 204 ealagvyHlansgetswfdfAraifkelgadg....eevkpissaefptpakrPa 254
                  + ag++  an+++t + +fArai+++l+  +    +++ p s a+ ++pa+rP+
  MMETSP1325-20131115|4273_1 197 GEFAGLFTTANEQATRKRGFARAIVSALAQGEheaaQQLAPGSAAKRARPASRPS 251
                 4569**********************9988778899******************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.37s 00:00:01.26 Elapsed: 00:00:00.64
# Mc/sec: 2227.86
//
Query:       MMETSP1325-20131115|4285_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-61  202.6   7.8    1.5e-24   85.9   0.5    2.5  3  PF12796.2  Ankyrin repeats (3 copies)
    7.1e-44  145.3   3.6    3.3e-09   35.9   0.0    5.0  5  PF00023.25 Ankyrin repeat
    5.3e-35  118.5   5.1    1.2e-09   37.9   0.1    4.0  4  PF13857.1  Ankyrin repeats (many copies)
    3.1e-34  116.6   0.1      1e-13   51.3   0.0    3.1  3  PF13637.1  Ankyrin repeats (many copies)
    5.2e-34  112.7   0.1    7.6e-07   28.6   0.0    5.0  5  PF13606.1  Ankyrin repeat
    0.00011   21.7   2.1          3    7.6   0.0    3.9  4  PF00627.26 UBA/TS-N domain
      0.001   19.1   1.3        6.4    7.0   0.0    3.4  3  PF14001.1  YdfZ protein
  ------ inclusion threshold ------
       0.04   13.3   0.7         14    5.2   0.0    3.2  3  PF02845.11 CUE domain
      0.091   12.8   1.1         19    5.3   0.0    2.8  3  PF04978.7  Protein of unknown function (DUF664)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   9.7e-21   1.5e-17      26      87 ..       7      68 ..       1      70 [. 0.94
   2 !   85.9   0.5   9.9e-28   1.5e-24       4      87 ..      47     134 ..      47     136 .. 0.97
   3 !   68.7   0.2   2.4e-22   3.6e-19       1      69 [.      77     149 ..      77     153 .. 0.96

  Alignments for each domain:
  == domain 1    score: 63.5 bits;  conditional E-value: 9.7e-21
   PF12796.2 26 getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87
                g tpL+ Aa+ g+le+v++L+eaga+v++ d++g tpL++A+ nghl++v+ L+e ga+v++
  MMETSP1325-20131115|4285_1  7 GATPLFMAAQEGHLEVVRALVEAGASVDQADEDGDTPLIMAAHNGHLKVVRALVEPGASVDQ 68
                789*******************************************************9986 PP

  == domain 2    score: 85.9 bits;  conditional E-value: 9.9e-28
   PF12796.2   4 AaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87 
                 Aa ng+l++v+ L+e ga+vd     g t L++Aa +g++e+v++Lleaga+v++ +k+g tpL+ A+++ghle+v++L+e+ga+ ++
  MMETSP1325-20131115|4285_1  47 AAHNGHLKVVRALVEPGASVDQarenGATLLFIAAHNGHVEVVRALLEAGASVDQATKDGATPLFTAAQYGHLEVVRVLVEAGANMDQ 134
                 89*********************999999********************************************************986 PP

  == domain 3    score: 68.7 bits;  conditional E-value: 2.4e-22
   PF12796.2   1 LhlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrn 69 
                 L++Aa ng++e+v+ Lle+ga+vd     g tpL+ Aa++g+le+v++L+eaga++++ +++g tpL++A++ 
  MMETSP1325-20131115|4285_1  77 LFIAAHNGHVEVVRALLEAGASVDQatkdGATPLFTAAQYGHLEVVRVLVEAGANMDQAMENGLTPLIIAAQE 149
                 789*********************99999999**************************************985 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   2.1e-12   3.3e-09       1      32 [.       6      37 ..       6      38 .. 0.96
   2 !   33.0   0.0   1.9e-11   2.8e-08       1      30 [.      39      68 ..      39      69 .. 0.96
   3 !   34.0   0.1   8.9e-12   1.4e-08       1      33 []      72     104 ..      72     104 .. 0.95
   4 !   33.4   0.0   1.4e-11   2.2e-08       1      30 [.     105     134 ..     105     136 .. 0.95
   5 !    6.2   0.0    0.0056       8.5       1      11 [.     138     148 ..     138     151 .. 0.91

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 2.1e-12
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                dG TPL +Aa+ g+levv+ L+++GA+++  d
  MMETSP1325-20131115|4285_1  6 DGATPLFMAAQEGHLEVVRALVEAGASVDQAD 37
                8***************************9987 PP

  == domain 2    score: 33.0 bits;  conditional E-value: 1.9e-11
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlna 30
                dG+TPL +Aa++g+l+vv+ L++ GA+++ 
  MMETSP1325-20131115|4285_1 39 DGDTPLIMAAHNGHLKVVRALVEPGASVDQ 68
                8**************************985 PP

  == domain 3    score: 34.0 bits;  conditional E-value: 8.9e-12
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 +G T L +Aa++g++evv+ Ll++GA+++  ++
  MMETSP1325-20131115|4285_1  72 NGATLLFIAAHNGHVEVVRALLEAGASVDQATK 104
                 799**************************9875 PP

  == domain 4    score: 33.4 bits;  conditional E-value: 1.4e-11
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlna 30 
                 dG TPL  Aa++g+levv+ L+++GA+ + 
  MMETSP1325-20131115|4285_1 105 DGATPLFTAAQYGHLEVVRVLVEAGANMDQ 134
                 8**************************985 PP

  == domain 5    score: 6.2 bits;  conditional E-value: 0.0056
                 TSCBHHHHHHH CS
  PF00023.25   1 dGfTPLHlAal 11 
                 +G TPL +Aa+
  MMETSP1325-20131115|4285_1 138 NGLTPLIIAAQ 148
                 79*******97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0     3e-10   4.6e-07      15      56 .]       6      47 ..       2      47 .. 0.94
   2 !   37.9   0.1   7.9e-13   1.2e-09       1      56 []      26      80 ..      26      80 .. 0.96
   3 !   31.7   0.1   7.2e-11   1.1e-07       7      56 .]      64     113 ..      63     113 .. 0.93
   4 !   37.3   0.0   1.3e-12   1.9e-09       1      56 []      92     146 ..      92     146 .. 0.92

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 3e-10
   PF13857.1 15 ggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                 g tpL +Aa  g+levvr L+++ga+ +  d+dg+t+l +A
  MMETSP1325-20131115|4285_1  6 DGATPLFMAAQEGHLEVVRALVEAGASVDQADEDGDTPLIMA 47
                456************************************988 PP

  == domain 2    score: 37.9 bits;  conditional E-value: 7.9e-13
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                L+e+g a+v++ de g tpL +Aa++g+l vvr L++pga+ +   ++g t l +A
  MMETSP1325-20131115|4285_1 26 LVEAG-ASVDQADEDGDTPLIMAAHNGHLKVVRALVEPGASVDQARENGATLLFIA 80
                899**.99999999999***********************************9988 PP

  == domain 3    score: 31.7 bits;  conditional E-value: 7.2e-11
   PF13857.1   7 advnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 a+v++ +e+g t+L +Aa++g++evvr Ll++ga+ +  ++dg t+l  A
  MMETSP1325-20131115|4285_1  64 ASVDQARENGATLLFIAAHNGHVEVVRALLEAGASVDQATKDGATPLFTA 113
                 67888899999***********************************9776 PP

  == domain 4    score: 37.3 bits;  conditional E-value: 1.3e-12
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 Lle+g a+v++  + g tpL +Aa +g+levvr L+++ga+ +   ++glt+l +A
  MMETSP1325-20131115|4285_1  92 LLEAG-ASVDQATKDGATPLFTAAQYGHLEVVRVLVEAGANMDQAMENGLTPLIIA 146
                 8****.77777777777************************************998 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   6.6e-17     1e-13       3      54 .]       9      60 ..       7      60 .. 0.97
   2 !   44.3   0.0   9.7e-15   1.5e-11       3      54 .]      75     126 ..      73     126 .. 0.97
   3 !   29.9   0.0   3.4e-10   5.1e-07       3      43 ..     108     148 ..     106     151 .. 0.95

  Alignments for each domain:
  == domain 1    score: 51.3 bits;  conditional E-value: 6.6e-17
   PF13637.1  3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                t+L++aa+ g+le+v+ L+e g+++++ de+G+t+L+ Aa +g++++++ L+
  MMETSP1325-20131115|4285_1  9 TPLFMAAQEGHLEVVRALVEAGASVDQADEDGDTPLIMAAHNGHLKVVRALV 60
                89***********************************************995 PP

  == domain 2    score: 44.3 bits;  conditional E-value: 9.7e-15
   PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 t+L+ aa+ g++e+v+ Lle g+++++  ++G t+L  Aa++g++e+++ L+
  MMETSP1325-20131115|4285_1  75 TLLFIAAHNGHVEVVRALLEAGASVDQATKDGATPLFTAAQYGHLEVVRVLV 126
                 89***********************************************995 PP

  == domain 3    score: 29.9 bits;  conditional E-value: 3.4e-10
   PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAal 43 
                 t+L+ aa++g+le+v+ L+e g++ ++  e+G t+L+iAa+
  MMETSP1325-20131115|4285_1 108 TPLFTAAQYGHLEVVRVLVEAGANMDQAMENGLTPLIIAAQ 148
                 89**************************999********96 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   4.6e-09     7e-06       1      29 [.       6      34 ..       6      35 .. 0.94
   2 !   24.1   0.0   1.4e-08   2.1e-05       1      29 [.      39      67 ..      39      68 .. 0.94
   3 !   28.6   0.0     5e-10   7.6e-07       1      29 [.      72     100 ..      72     101 .. 0.94
   4 !   24.9   0.0   7.9e-09   1.2e-05       1      27 [.     105     131 ..     105     134 .. 0.93
   5 ?    3.3   0.0     0.077   1.2e+02       1      11 [.     138     148 ..     138     152 .. 0.90

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 4.6e-09
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +G TpL++Aa+ g++e+v+aL+e+ga ++
  MMETSP1325-20131115|4285_1  6 DGATPLFMAAQEGHLEVVRALVEAGASVD 34
                688***********************986 PP

  == domain 2    score: 24.1 bits;  conditional E-value: 1.4e-08
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +G+TpL +Aa+ng++++v+aL+e ga ++
  MMETSP1325-20131115|4285_1 39 DGDTPLIMAAHNGHLKVVRALVEPGASVD 67
                79*********************999876 PP

  == domain 3    score: 28.6 bits;  conditional E-value: 5e-10
   PF13606.1   1 nGnTpLhlAasngrielveaLlengadin 29 
                 nG T+L++Aa+ng++e+v+aLle+ga ++
  MMETSP1325-20131115|4285_1  72 NGATLLFIAAHNGHVEVVRALLEAGASVD 100
                 789***********************986 PP

  == domain 4    score: 24.9 bits;  conditional E-value: 7.9e-09
   PF13606.1   1 nGnTpLhlAasngrielveaLlengad 27 
                 +G TpL++Aa++g++e+v+ L+e+ga+
  MMETSP1325-20131115|4285_1 105 DGATPLFTAAQYGHLEVVRVLVEAGAN 131
                 688**********************98 PP

  == domain 5    score: 3.3 bits;  conditional E-value: 0.077
   PF13606.1   1 nGnTpLhlAas 11 
                 nG TpL +Aa+
  MMETSP1325-20131115|4285_1 138 NGLTPLIIAAQ 148
                 89*******97 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.019        29      18      33 ..      21      36 ..      18      36 .. 0.88
   2 ?   -0.5   0.0       0.7   1.1e+03       6      20 ..      56      70 ..      52      71 .. 0.52
   3 !    7.6   0.0     0.002         3      17      35 ..      86     104 ..      83     105 .. 0.89
   4 !    6.3   0.0    0.0053         8      17      35 ..     119     137 ..     115     138 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.019
                HHHHHHHHTTTSHHHH CS
  PF00627.26 18 eakkALratnnnvErA 33
                e+++AL +++ +v++A
  MMETSP1325-20131115|4285_1 21 EVVRALVEAGASVDQA 36
                7999**9999999988 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.7
                HHHHHH----HHHHH CS
  PF00627.26  6 iqqLreMGfsreeak 20
                +  L+e G+s ++a+
  MMETSP1325-20131115|4285_1 56 VRALVEPGASVDQAR 70
                444555555555554 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.002
                 HHHHHHHHHTTTSHHHHHH CS
  PF00627.26  17 eeakkALratnnnvErAve 35 
                  e+++AL +++ +v++A++
  MMETSP1325-20131115|4285_1  86 VEVVRALLEAGASVDQATK 104
                 69***************85 PP

  == domain 4    score: 6.3 bits;  conditional E-value: 0.0053
                 HHHHHHHHHTTTSHHHHHH CS
  PF00627.26  17 eeakkALratnnnvErAve 35 
                  e+++ L +++ n+++A+e
  MMETSP1325-20131115|4285_1 119 LEVVRVLVEAGANMDQAME 137
                 589**************98 PP

>> PF14001.1  YdfZ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.024        37      17      41 ..      13      37 ..       7      43 .. 0.91
   2 !    7.0   0.0    0.0042       6.4      16      43 ..      45      72 ..      40      78 .. 0.91
   3 ?    5.3   0.0     0.014        21      18      43 ..      80     105 ..      73     125 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.024
   PF14001.1 17 MiagtgevgvikaihadgltaeQir 41
                M a+ g+ +v++a    g + +Q+ 
  MMETSP1325-20131115|4285_1 13 MAAQEGHLEVVRALVEAGASVDQAD 37
                99*****************999986 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0042
   PF14001.1 16 VMiagtgevgvikaihadgltaeQirra 43
                +M a +g+  v++a    g + +Q+r +
  MMETSP1325-20131115|4285_1 45 IMAAHNGHLKVVRALVEPGASVDQAREN 72
                7************************975 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.014
   PF14001.1  18 iagtgevgvikaihadgltaeQirra 43 
                  a +g+v+v++a    g + +Q+ + 
  MMETSP1325-20131115|4285_1  80 AAHNGHVEVVRALLEAGASVDQATKD 105
                 4789******************9875 PP

>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.44   6.7e+02      20      34 ..      22      36 ..      19      36 .. 0.78
   2 ?    4.3   0.0     0.017        25      17      35 ..      86     103 ..      82     104 .. 0.88
   3 ?    5.2   0.0     0.009        14      20      37 ..     121     138 ..     120     138 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.44
                HHHHHHHSTTTHHHH CS
  PF02845.11 20 IravLrasngnvEaa 34
                ++++L + + +v++a
  MMETSP1325-20131115|4285_1 22 VVRALVEAGASVDQA 36
                456777999999987 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.017
                 HHHHHHHHHHSTTTHHHHH CS
  PF02845.11  17 eevIravLrasngnvEaai 35 
                 +ev+ra+L + + +v++a+
  MMETSP1325-20131115|4285_1  86 VEVVRALL-EAGASVDQAT 103
                 68999999.*******996 PP

  == domain 3    score: 5.2 bits;  conditional E-value: 0.009
                 HHHHHHHSTTTHHHHHHH CS
  PF02845.11  20 IravLrasngnvEaaina 37 
                 +++vL + + n+++a+++
  MMETSP1325-20131115|4285_1 121 VVRVLVEAGANMDQAMEN 138
                 789*************96 PP

>> PF04978.7  Protein of unknown function (DUF664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.1   3.2e+03     138     148 ..      17      27 ..      13      39 .. 0.80
   2 ?    5.1   0.0     0.014        22     135     148 ..      47      60 ..      46      62 .. 0.88
   3 ?    5.3   0.0     0.012        19     135     148 ..      80      93 ..      78      95 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 2.1
                 ---HHHHHHHH CS
   PF04978.7 138 aGhaDilRell 148
                  Gh+ ++R l+
  MMETSP1325-20131115|4285_1  17 EGHLEVVRALV 27 
                 58888888776 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.014
                 HHH---HHHHHHHH CS
   PF04978.7 135 arHaGhaDilRell 148
                 a H+Gh+ ++R l+
  MMETSP1325-20131115|4285_1  47 AAHNGHLKVVRALV 60 
                 89*********986 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.012
                 HHH---HHHHHHHH CS
   PF04978.7 135 arHaGhaDilRell 148
                 a H+Gh+ ++R ll
  MMETSP1325-20131115|4285_1  80 AAHNGHVEVVRALL 93 
                 89*********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 636.27
//
Query:       MMETSP1325-20131115|4283_1  [L=817]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-82  271.6   0.9    1.3e-15   57.0   0.0    7.6  8  PF13041.1  PPR repeat family
      6e-49  160.5   3.8      1e-06   28.1   0.0    7.9  8  PF01535.15 PPR repeat
    5.2e-47  154.0   0.0    1.8e-06   27.6   0.0    7.6  7  PF13812.1  Pentatricopeptide repeat domain
    2.8e-39  132.1   0.0    0.00028   20.1   0.0    7.7  7  PF12854.2  PPR repeat
    2.1e-06   27.8   1.0         17    5.4   0.2    6.3  7  PF13579.1  Glycosyl transferase 4-like domain
      4e-05   22.7   0.0        1.7    7.4   0.0    3.2  3  PF13429.1  Tetratricopeptide repeat
    7.6e-05   22.2   0.0       0.56    9.6   0.0    3.3  3  PF00637.15 Region in Clathrin and VPS
    0.00036   20.2   0.3         13    5.4   0.0    5.6  7  PF03013.9  Pyrimidine dimer DNA glycosylase
     0.0009   18.7   2.2         43    4.1   0.0    5.3  5  PF13176.1  Tetratricopeptide repeat
     0.0023   17.6   0.0         11    5.8   0.0    5.3  8  PF01900.14 Rpp14/Pop5 family
     0.0092   16.4  19.0        5.7    7.7   0.1    7.6  7  PF13428.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.09   12.7   0.1         94    3.0   0.0    4.2  4  PF08967.5  Domain of unknown function (DUF1884)
       0.29    9.8   0.0         37    2.9   0.0    3.9  6  PF06239.6  Evolutionarily conserved signalling intermediate in Toll pathway
        0.3   11.5   8.0         47    4.6   0.0    6.1  7  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.7   5.6e+03      32      42 ..      47      57 ..      40      67 .. 0.55
   2 !   51.2   0.0   8.2e-17   8.1e-14       1      48 [.      91     138 ..      91     140 .. 0.97
   3 !   49.4   0.0   2.9e-16   2.9e-13       1      48 [.     126     173 ..     126     175 .. 0.97
   4 !   38.9   0.0   5.7e-13   5.6e-10       3      48 ..     163     208 ..     163     210 .. 0.97
   5 !   44.8   0.0     8e-15   7.8e-12       2      48 ..     197     243 ..     196     245 .. 0.97
   6 !   44.1   0.0   1.4e-14   1.4e-11       1      48 [.     231     278 ..     231     278 .. 0.99
   7 !   57.0   0.0   1.3e-18   1.3e-15       1      49 [.     266     314 ..     266     315 .. 0.97
   8 !   27.8   0.0   1.6e-09   1.6e-06       1      36 [.     301     336 ..     301     339 .. 0.97

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 5.7
   PF13041.1 32 rgikPnvyTYs 42
                +g+ P+vy  s
  MMETSP1325-20131115|4283_1 47 EGRGPDVYHIS 57
                55556665544 PP

  == domain 2    score: 51.2 bits;  conditional E-value: 8.2e-17
   PF13041.1   1 pnvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikgl 48 
                 pnvvt+ t Is++ k ++++ A++l++eM+ rg++Pnv+TY+  i+++
  MMETSP1325-20131115|4283_1  91 PNVVTFSTAISACEKGRQWKRALELLREMQARGLEPNVITYNATISAC 138
                 8**********************************************8 PP

  == domain 3    score: 49.4 bits;  conditional E-value: 2.9e-16
   PF13041.1   1 pnvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikgl 48 
                 pnv+tYN+ Is++ k g+++  ++l++eMk  g++Pnv+TYs  i+++
  MMETSP1325-20131115|4283_1 126 PNVITYNATISACEKGGQWQRGLELLREMKAQGLEPNVITYSASISAC 173
                 8*********************************************98 PP

  == domain 4    score: 38.9 bits;  conditional E-value: 5.7e-13
   PF13041.1   3 vvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikgl 48 
                 v+tY + Is++ k g++e+A++l++eM+ rg+k nv+T+s  i+++
  MMETSP1325-20131115|4283_1 163 VITYSASISACEKGGQWEMALELLHEMEGRGLKANVITFSASISAC 208
                 79******************************************98 PP

  == domain 5    score: 44.8 bits;  conditional E-value: 8e-15
   PF13041.1   2 nvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikgl 48 
                 nv+t+ + Is++ k g++e A++l++e k+rg++Pnv+TY+  i+++
  MMETSP1325-20131115|4283_1 197 NVITFSASISACEKGGQWERALELLDEIKSRGLEPNVITYNAAISAC 243
                 9*********************************************8 PP

  == domain 6    score: 44.1 bits;  conditional E-value: 1.4e-14
   PF13041.1   1 pnvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikgl 48 
                 pnv+tYN+ Is++ k g+++  ++l++eM+ r ++P+v+TY+  i+++
  MMETSP1325-20131115|4283_1 231 PNVITYNAAISACEKGGQWQRGLELLREMEGRSLRPDVITYNAAISAC 278
                 8*********************************************97 PP

  == domain 7    score: 57.0 bits;  conditional E-value: 1.3e-18
   PF13041.1   1 pnvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikglc 49 
                 p+v+tYN+ Is++ + g++e+A+kl++eM+ rg++Pnv+TY+  i+++ 
  MMETSP1325-20131115|4283_1 266 PDVITYNAAISACEQGGQWEMALKLLREMEARGLEPNVITYNAAISACQ 314
                 8**********************************************85 PP

  == domain 8    score: 27.8 bits;  conditional E-value: 1.6e-09
   PF13041.1   1 pnvvtYNtlIsglckkgkveeAfklfneMkkrgikP 36 
                 pnv+tYN+ Is++ k  ++e A +l++eM+ rg+kP
  MMETSP1325-20131115|4283_1 301 PNVITYNAAISACQKGVQWEHAAQLLREMEARGLKP 336
                 8**********************************9 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.6   2.5e+03      17      28 ..      57      68 ..      55      70 .. 0.83
   2 !   22.8   0.0   5.2e-08   5.1e-05       1      31 []      94     124 ..      94     124 .. 0.97
   3 !   22.5   0.0   6.6e-08   6.4e-05       1      31 []     129     159 ..     129     159 .. 0.95
   4 !   22.8   0.1   5.4e-08   5.2e-05       1      31 []     164     194 ..     164     194 .. 0.94
   5 !   18.7   0.0     1e-06     0.001       2      31 .]     200     229 ..     199     229 .. 0.91
   6 !   21.7   0.0   1.2e-07   0.00012       1      29 [.     234     262 ..     234     264 .. 0.94
   7 !   28.1   0.0     1e-09     1e-06       1      31 []     269     299 ..     269     299 .. 0.96
   8 !   16.9   0.0   3.9e-06    0.0038       1      31 []     304     334 ..     304     334 .. 0.96

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 2.6
  PF01535.15 17 eeAlelfkeMke 28
                ++A++l+ +M+ 
  MMETSP1325-20131115|4283_1 57 SMAVSLISRMRG 68
                689*******96 PP

  == domain 2    score: 22.8 bits;  conditional E-value: 5.2e-08
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkekGv 31 
                 vt+++ Is++ k ++++ Alel++eM+ +G+
  MMETSP1325-20131115|4283_1  94 VTFSTAISACEKGRQWKRALELLREMQARGL 124
                 8***************************996 PP

  == domain 3    score: 22.5 bits;  conditional E-value: 6.6e-08
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkekGv 31 
                 +tyn+ Is++ k G+++  lel++eMk  G+
  MMETSP1325-20131115|4283_1 129 ITYNATISACEKGGQWQRGLELLREMKAQGL 159
                 69*************************9885 PP

  == domain 4    score: 22.8 bits;  conditional E-value: 5.4e-08
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkekGv 31 
                 +ty++ Is++ k G++e+Alel++eM+ +G+
  MMETSP1325-20131115|4283_1 164 ITYSASISACEKGGQWEMALELLHEMEGRGL 194
                 589999**********************996 PP

  == domain 5    score: 18.7 bits;  conditional E-value: 1e-06
  PF01535.15   2 tynslIsgyckaGkleeAlelfkeMkekGv 31 
                 t+++ Is++ k G++e Alel++e+k++G+
  MMETSP1325-20131115|4283_1 200 TFSASISACEKGGQWERALELLDEIKSRGL 229
                 666679**********************96 PP

  == domain 6    score: 21.7 bits;  conditional E-value: 1.2e-07
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkek 29 
                 +tyn+ Is++ k G+++  lel++eM+ +
  MMETSP1325-20131115|4283_1 234 ITYNAAISACEKGGQWQRGLELLREMEGR 262
                 69************************986 PP

  == domain 7    score: 28.1 bits;  conditional E-value: 1e-09
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkekGv 31 
                 +tyn+ Is++ + G++e+Al+l++eM+ +G+
  MMETSP1325-20131115|4283_1 269 ITYNAAISACEQGGQWEMALKLLREMEARGL 299
                 69**************************996 PP

  == domain 8    score: 16.9 bits;  conditional E-value: 3.9e-06
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkekGv 31 
                 +tyn+ Is++ k  ++e A +l++eM+ +G+
  MMETSP1325-20131115|4283_1 304 ITYNAAISACQKGVQWEHAAQLLREMEARGL 334
                 69**************************996 PP

>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   1.8e-07   0.00018       1      34 []      93     126 ..      93     126 .. 0.97
   2 !   25.8   0.0   7.2e-09     7e-06       1      34 []     128     161 ..     128     161 .. 0.97
   3 !   17.0   0.0   4.8e-06    0.0046       2      33 ..     164     195 ..     163     196 .. 0.93
   4 !   15.8   0.0   1.1e-05     0.011       2      34 .]     199     231 ..     198     231 .. 0.94
   5 !   18.3   0.0   1.7e-06    0.0017       1      34 []     233     266 ..     233     266 .. 0.93
   6 !   27.6   0.0   1.9e-09   1.8e-06       1      34 []     268     301 ..     268     301 .. 0.97
   7 !   18.4   0.0   1.7e-06    0.0017       1      34 []     303     336 ..     303     336 .. 0.97

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 1.8e-07
   PF13812.1   1 vetyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 v+t++t i a+ k  ++++Al+ll+eM+++g++P
  MMETSP1325-20131115|4283_1  93 VVTFSTAISACEKGRQWKRALELLREMQARGLEP 126
                 68******************************99 PP

  == domain 2    score: 25.8 bits;  conditional E-value: 7.2e-09
   PF13812.1   1 vetyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 v+tyn+ i a+ k g++++ l+ll+eM++qg++P
  MMETSP1325-20131115|4283_1 128 VITYNATISACEKGGQWQRGLELLREMKAQGLEP 161
                 57******************************99 PP

  == domain 3    score: 17.0 bits;  conditional E-value: 4.8e-06
   PF13812.1   2 etyntlitalaksgrpeaAlalleeMeqqgvk 33 
                 +ty++ i a+ k g++e+Al+ll+eMe +g+k
  MMETSP1325-20131115|4283_1 164 ITYSASISACEKGGQWEMALELLHEMEGRGLK 195
                 799999*********************99987 PP

  == domain 4    score: 15.8 bits;  conditional E-value: 1.1e-05
   PF13812.1   2 etyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 +t+++ i a+ k g++e+Al+ll+e +++g++P
  MMETSP1325-20131115|4283_1 199 ITFSASISACEKGGQWERALELLDEIKSRGLEP 231
                 6888889************************99 PP

  == domain 5    score: 18.3 bits;  conditional E-value: 1.7e-06
   PF13812.1   1 vetyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 v+tyn+ i a+ k g++++ l+ll+eMe + ++P
  MMETSP1325-20131115|4283_1 233 VITYNAAISACEKGGQWQRGLELLREMEGRSLRP 266
                 57**************************888877 PP

  == domain 6    score: 27.6 bits;  conditional E-value: 1.9e-09
   PF13812.1   1 vetyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 v+tyn+ i a+   g++e+Al+ll+eMe++g++P
  MMETSP1325-20131115|4283_1 268 VITYNAAISACEQGGQWEMALKLLREMEARGLEP 301
                 57******************************99 PP

  == domain 7    score: 18.4 bits;  conditional E-value: 1.7e-06
   PF13812.1   1 vetyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 v+tyn+ i a+ k  ++e A +ll+eMe++g+kP
  MMETSP1325-20131115|4283_1 303 VITYNAAISACQKGVQWEHAAQLLREMEARGLKP 336
                 57*******************************9 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0     1e-06     0.001       2      34 .]      88     120 ..      87     120 .. 0.90
   2 !   18.4   0.0   9.9e-07   0.00097       1      34 []     122     155 ..     122     155 .. 0.97
   3 !   18.0   0.0   1.3e-06    0.0013       1      34 []     157     190 ..     157     190 .. 0.97
   4 !   11.5   0.0   0.00015      0.14       1      32 [.     192     223 ..     192     225 .. 0.96
   5 !   20.1   0.0   2.9e-07   0.00028       1      34 []     227     260 ..     227     260 .. 0.97
   6 !   19.5   0.0   4.5e-07   0.00044       3      34 .]     264     295 ..     262     295 .. 0.96
   7 !   16.3   0.0   4.5e-06    0.0044       1      34 []     297     330 ..     297     330 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1e-06
   PF12854.2   2 GlkPdvvTYNtLIdGlCraGrvdeAvelldeMe 34 
                 +++P+vvT++t I++  +    ++A+ell+eM+
  MMETSP1325-20131115|4283_1  88 NVEPNVVTFSTAISACEKGRQWKRALELLREMQ 120
                 589***********977777799*********6 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 9.9e-07
   PF12854.2   1 kGlkPdvvTYNtLIdGlCraGrvdeAvelldeMe 34 
                 +Gl+P+v+TYN  I++  + G   + +ell+eM+
  MMETSP1325-20131115|4283_1 122 RGLEPNVITYNATISACEKGGQWQRGLELLREMK 155
                 79*******************************6 PP

  == domain 3    score: 18.0 bits;  conditional E-value: 1.3e-06
   PF12854.2   1 kGlkPdvvTYNtLIdGlCraGrvdeAvelldeMe 34 
                 +Gl+P+v+TY+  I++  + G  + A+ell eMe
  MMETSP1325-20131115|4283_1 157 QGLEPNVITYSASISACEKGGQWEMALELLHEME 190
                 59*******************************7 PP

  == domain 4    score: 11.5 bits;  conditional E-value: 0.00015
   PF12854.2   1 kGlkPdvvTYNtLIdGlCraGrvdeAvellde 32 
                 +Glk +v+T++  I++  + G  ++A+ellde
  MMETSP1325-20131115|4283_1 192 RGLKANVITFSASISACEKGGQWERALELLDE 223
                 69*****************************9 PP

  == domain 5    score: 20.1 bits;  conditional E-value: 2.9e-07
   PF12854.2   1 kGlkPdvvTYNtLIdGlCraGrvdeAvelldeMe 34 
                 +Gl+P+v+TYN  I++  + G   + +ell+eMe
  MMETSP1325-20131115|4283_1 227 RGLEPNVITYNAAISACEKGGQWQRGLELLREME 260
                 79*******************************7 PP

  == domain 6    score: 19.5 bits;  conditional E-value: 4.5e-07
   PF12854.2   3 lkPdvvTYNtLIdGlCraGrvdeAvelldeMe 34 
                 l+Pdv+TYN  I++  + G  + A++ll+eMe
  MMETSP1325-20131115|4283_1 264 LRPDVITYNAAISACEQGGQWEMALKLLREME 295
                 89*****************************7 PP

  == domain 7    score: 16.3 bits;  conditional E-value: 4.5e-06
   PF12854.2   1 kGlkPdvvTYNtLIdGlCraGrvdeAvelldeMe 34 
                 +Gl+P+v+TYN  I++  +    + A +ll+eMe
  MMETSP1325-20131115|4283_1 297 RGLEPNVITYNAAISACQKGVQWEHAAQLLREME 330
                 79************99666668999999999996 PP

>> PF13579.1  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.4   1.4e+03      54      81 ..      28      58 ..      21      98 .. 0.81
   2 ?    5.3   0.0     0.018        18       4      29 ..     109     134 ..     106     139 .. 0.89
   3 ?    4.8   0.0     0.026        25       1      29 [.     141     169 ..     141     181 .. 0.90
   4 ?   -1.5   0.0       2.3   2.2e+03       1      27 [.     176     202 ..     176     208 .. 0.90
   5 ?    2.7   0.0      0.12   1.1e+02       1      31 [.     211     241 ..     211     265 .. 0.82
   6 ?    0.6   0.0      0.51     5e+02       1      29 [.     246     274 ..     246     279 .. 0.89
   7 ?    5.4   0.2     0.017        17       1      31 [.     281     311 ..     281     382 .. 0.81

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 1.4
   PF13579.1 54 ladlaalralrrll...rqrrerpdvvhahs 81
                l++++++ +l  +l   r++ ++pdv h+  
  MMETSP1325-20131115|4283_1 28 LKSAKSPSQLDYVLeniRAEGRGPDVYHISM 58
                66777888888888888999999***99876 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.018
   PF13579.1   4 eryvrelaeaLaarGheVtvltpaaa 29 
                 +++++el+++++arG e  v+t+ a+
  MMETSP1325-20131115|4283_1 109 WKRALELLREMQARGLEPNVITYNAT 134
                 6899******************8765 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.026
   PF13579.1   1 gGieryvrelaeaLaarGheVtvltpaaa 29 
                 gG +++ +el++++ a+G e  v+t++a 
  MMETSP1325-20131115|4283_1 141 GGQWQRGLELLREMKAQGLEPNVITYSAS 169
                 89***********************8765 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 2.3
   PF13579.1   1 gGieryvrelaeaLaarGheVtvltpa 27 
                 gG +  ++el++++  rG    v+t +
  MMETSP1325-20131115|4283_1 176 GGQWEMALELLHEMEGRGLKANVITFS 202
                 8999***************99999965 PP

  == domain 5    score: 2.7 bits;  conditional E-value: 0.12
   PF13579.1   1 gGieryvrelaeaLaarGheVtvltpaaapg 31 
                 gG + +++el+ +  +rG e  v+t+ aa +
  MMETSP1325-20131115|4283_1 211 GGQWERALELLDEIKSRGLEPNVITYNAAIS 241
                 89***********************877655 PP

  == domain 6    score: 0.6 bits;  conditional E-value: 0.51
   PF13579.1   1 gGieryvrelaeaLaarGheVtvltpaaa 29 
                 gG +++ +el++++  r  + +v+t+ aa
  MMETSP1325-20131115|4283_1 246 GGQWQRGLELLREMEGRSLRPDVITYNAA 274
                 89999*******************98765 PP

  == domain 7    score: 5.4 bits;  conditional E-value: 0.017
   PF13579.1   1 gGieryvrelaeaLaarGheVtvltpaaapg 31 
                 gG +  ++ l++++ arG e  v+t+ aa +
  MMETSP1325-20131115|4283_1 281 GGQWEMALKLLREMEARGLEPNVITYNAAIS 311
                 89999********************877665 PP

>> PF13429.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0036       3.5     102     171 ..      85     153 ..      78     165 .. 0.87
   2 ?    4.9   0.0      0.01        10     113     171 ..     166     223 ..     160     227 .. 0.87
   3 !    7.4   0.0    0.0018       1.7     112     171 ..     235     293 ..     230     301 .. 0.92

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0036
   PF13429.1 102 eayrryksprlLqsalellerakdykrieellasleekeaaeqsalfllaraellrqegqkkkAlrllrr 171
                 ++y+   ++  ++ a+   e+ +++kr  ell++ ++ + +e +  ++ a +++ ++ gq+++ l+llr+
  MMETSP1325-20131115|4283_1  85 AKYNVEPNVVTFSTAISACEKGRQWKRALELLRE-MQARGLEPNVITYNATISACEKGGQWQRGLELLRE 153
                 56666667778899********************.66666**************************9997 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.01
   PF13429.1 113 LqsalellerakdykrieellasleekeaaeqsalfllaraellrqegqkkkAlrllrr 171
                 +++ +   e+ ++++   ell ++e +  ++ +  +++a +++ ++ gq+++Al+ll++
  MMETSP1325-20131115|4283_1 166 YSASISACEKGGQWEMALELLHEMEGRG-LKANVITFSASISACEKGGQWERALELLDE 223
                 5667788888999999999**9977776.9*************************9875 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0018
   PF13429.1 112 lLqsalellerakdykrieellasleekeaaeqsalfllaraellrqegqkkkAlrllrr 171
                  +++a+   e+ ++++r  ell+++e ++ ++ +  ++ a +++ +q gq++ Al+llr+
  MMETSP1325-20131115|4283_1 235 TYNAAISACEKGGQWQRGLELLREMEGRS-LRPDVITYNAAISACEQGGQWEMALKLLRE 293
                 67899*******************88777.9**************************997 PP

>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0017       1.6      10      94 ..      96     187 ..      88     191 .. 0.87
   2 !    9.6   0.0   0.00057      0.56       8      96 ..     199     294 ..     194     331 .. 0.81
   3 ?   -2.9   0.0       4.2   4.1e+03      61      87 ..     611     637 ..     606     640 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0017
                 STTTHHHHHTTT-GGGGTGGGTS--...-S--HHHHHHHHHHHHHTT--HHHHHTTS.......S---S-TTHHHHHHHT-SSHHHHHHHH- CS
  PF00637.15  10 lsevvklfekaglleelieyLekvlketsrenpavqtallelyakyedpekleeflk.......knnnydlekvaklcekadlyeeavilyk 94 
                  s  ++++ek  +++  +e+L++ ++++ + n++ ++a + +  k ++ ++  e l+       + n +     ++ cek + +e+a++l+ 
  MMETSP1325-20131115|4283_1  96 FSTAISACEKGRQWKRALELLREMQARGLEPNVITYNATISACEKGGQWQRGLELLRemkaqglEPNVITYSASISACEKGGQWEMALELLH 187
                 6788999******************9998889***********9999999999999987778777777888999999999999999999875 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00057
                 --STTTHHHHHTTT-GGGGTGGGTS--...-S--HHHHHHHHHHHHHTT--HHHHHTTS.......S---S-TTHHHHHHHT-SSHHHHHHHH--- CS
  PF00637.15   8 idlsevvklfekaglleelieyLekvlketsrenpavqtallelyakyedpekleeflk.......knnnydlekvaklcekadlyeeavilykki 96 
                 i  s+ ++++ek g++e  +e+L ++ +++ + n++ ++a + +  k ++ ++  e l+       + + +  + +++ ce+ + +e+a+ l++ +
  MMETSP1325-20131115|4283_1 199 ITFSASISACEKGGQWERALELLDEIKSRGLEPNVITYNAAISACEKGGQWQRGLELLRemegrslRPDVITYNAAISACEQGGQWEMALKLLREM 294
                 667778999******************9998889**************99999999999888887777789999*************999998874 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 4.2
                 HHHTTSS---S-TTHHHHHHHT-SSHH CS
  PF00637.15  61 leeflkknnnydlekvaklcekadlye 87 
                 + + ++++++yd+e++ + +  a ly+
  MMETSP1325-20131115|4283_1 611 VSSLMNQSSTYDRERLNDNLGRATLYN 637
                 566788888899999988887777776 PP

>> PF03013.9  Pyrimidine dimer DNA glycosylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.014        13      63      85 ..     110     132 ..     105     149 .. 0.85
   2 ?   -1.2   0.0       1.5   1.5e+03      63      84 ..     145     166 ..     138     175 .. 0.86
   3 ?   -0.7   0.0         1     1e+03      66      83 ..     183     200 ..     179     210 .. 0.83
   4 ?    2.1   0.0      0.14   1.4e+02      63      85 ..     215     237 ..     214     252 .. 0.84
   5 ?   -1.9   0.0       2.4   2.4e+03      63      84 ..     250     271 ..     245     278 .. 0.85
   6 ?    2.3   0.0      0.12   1.2e+02      66      85 ..     288     307 ..     284     322 .. 0.84
   7 ?    1.0   0.0       0.3   2.9e+02      66      81 ..     323     338 ..     318     347 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.014
   PF03013.9  63 krhlllieEmlkRgynvneewkd 85 
                 kr l+l++Em++Rg ++n  +++
  MMETSP1325-20131115|4283_1 110 KRALELLREMQARGLEPNVITYN 132
                 78999************998776 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 1.5
   PF03013.9  63 krhlllieEmlkRgynvneewk 84 
                 +r l+l++Em++ g ++n  ++
  MMETSP1325-20131115|4283_1 145 QRGLELLREMKAQGLEPNVITY 166
                 68899**********9998665 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1
   PF03013.9  66 lllieEmlkRgynvneew 83 
                 l+l++Em+ Rg + n  +
  MMETSP1325-20131115|4283_1 183 LELLHEMEGRGLKANVIT 200
                 6899*******9998765 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.14
   PF03013.9  63 krhlllieEmlkRgynvneewkd 85 
                 +r l+l++E+++Rg ++n  +++
  MMETSP1325-20131115|4283_1 215 ERALELLDEIKSRGLEPNVITYN 237
                 58899************988776 PP

  == domain 5    score: -1.9 bits;  conditional E-value: 2.4
   PF03013.9  63 krhlllieEmlkRgynvneewk 84 
                 +r l+l++Em+ R  +++  ++
  MMETSP1325-20131115|4283_1 250 QRGLELLREMEGRSLRPDVITY 271
                 68889********999987665 PP

  == domain 6    score: 2.3 bits;  conditional E-value: 0.12
   PF03013.9  66 lllieEmlkRgynvneewkd 85 
                 l+l++Em++Rg ++n  +++
  MMETSP1325-20131115|4283_1 288 LKLLREMEARGLEPNVITYN 307
                 6899**********988776 PP

  == domain 7    score: 1.0 bits;  conditional E-value: 0.3
   PF03013.9  66 lllieEmlkRgynvne 81 
                 ++l++Em++Rg +++ 
  MMETSP1325-20131115|4283_1 323 AQLLREMEARGLKPKA 338
                 6899********9986 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.17   1.6e+02       8      24 ..     102     118 ..     100     127 .. 0.88
   2 ?    2.8   0.0      0.11   1.1e+02       7      24 ..     171     188 ..     165     189 .. 0.84
   3 ?    3.9   0.0     0.051        50       8      23 ..     207     222 ..     202     225 .. 0.89
   4 ?   -2.5   0.0       5.6   5.4e+03       4      17 ..     238     251 ..     235     259 .. 0.61
   5 ?    4.1   0.0     0.044        43       2      24 ..     271     293 ..     270     302 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.17
   PF13176.1   8 lysrlgdyekAielyer 24 
                 ++++ +++++A+el+++
  MMETSP1325-20131115|4283_1 102 ACEKGRQWKRALELLRE 118
                 789999********998 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.11
   PF13176.1   7 rlysrlgdyekAielyer 24 
                 +++++ g++e A+el+ +
  MMETSP1325-20131115|4283_1 171 SACEKGGQWEMALELLHE 188
                 6899**********9865 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.051
   PF13176.1   8 lysrlgdyekAielye 23 
                 ++++ g++e+A+el+ 
  MMETSP1325-20131115|4283_1 207 ACEKGGQWERALELLD 222
                 8999*********985 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 5.6
   PF13176.1   4 nLarlysrlgdyek 17 
                 +  +++++ g++++
  MMETSP1325-20131115|4283_1 238 AAISACEKGGQWQR 251
                 44456777777776 PP

  == domain 5    score: 4.1 bits;  conditional E-value: 0.044
   PF13176.1   2 llnLarlysrlgdyekAielyer 24 
                 +++  +++++ g++e A++l+++
  MMETSP1325-20131115|4283_1 271 YNAAISACEQGGQWEMALKLLRE 293
                 55566899************987 PP

>> PF01900.14  Rpp14/Pop5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.1   1.1e+03      71     102 ..      56     105 ..      51     108 .. 0.77
   2 ?    2.3   0.0      0.14   1.4e+02      69     102 ..     107     140 ..      83     143 .. 0.85
   3 ?    0.1   0.0      0.69   6.7e+02      75     102 ..     148     175 ..     145     178 .. 0.90
   4 ?    5.8   0.0     0.012        11      73     102 ..     181     210 ..     177     213 .. 0.94
   5 ?   -1.5   0.0       2.1   2.1e+03      74     102 ..     217     245 ..     214     247 .. 0.92
   6 ?   -2.4   0.0       4.1     4e+03      75     102 ..     253     280 ..     252     283 .. 0.91
   7 ?   -0.6   0.0       1.1   1.1e+03      73     102 ..     286     315 ..     278     318 .. 0.91
   8 ?   -3.5   0.0       9.1   8.9e+03      14      31 ..     626     643 ..     617     645 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 1.1
  PF01900.14  71 vwaaLtlitsieg..................kpviirvlkvSGTikkaee 102
                 + +a++li++++g                   +v ++v+  S +i+++e+
  MMETSP1325-20131115|4283_1  56 ISMAVSLISRMRGpgggwkgavwllqsasakYNVEPNVVTFSTAISACEK 105
                 66677777777777777777777777777779999*************97 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.14
  PF01900.14  69 rlvwaaLtlitsiegkpviirvlkvSGTikkaee 102
                 r+   aL l+++++ +   ++v+   +Ti+++e+
  MMETSP1325-20131115|4283_1 107 RQWKRALELLREMQARGLEPNVITYNATISACEK 140
                 55667999************************97 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.69
  PF01900.14  75 LtlitsiegkpviirvlkvSGTikkaee 102
                 L l+++++ +   ++v+  S++i+++e+
  MMETSP1325-20131115|4283_1 148 LELLREMKAQGLEPNVITYSASISACEK 175
                 7788999999999*************97 PP

  == domain 4    score: 5.8 bits;  conditional E-value: 0.012
  PF01900.14  73 aaLtlitsiegkpviirvlkvSGTikkaee 102
                 +aL l++++eg+    +v+  S++i+++e+
  MMETSP1325-20131115|4283_1 181 MALELLHEMEGRGLKANVITFSASISACEK 210
                 79**************************97 PP

  == domain 5    score: -1.5 bits;  conditional E-value: 2.1
  PF01900.14  74 aLtlitsiegkpviirvlkvSGTikkaee 102
                 aL l+++i+ +   ++v+   ++i+++e+
  MMETSP1325-20131115|4283_1 217 ALELLDEIKSRGLEPNVITYNAAISACEK 245
                 899***********************997 PP

  == domain 6    score: -2.4 bits;  conditional E-value: 4.1
  PF01900.14  75 LtlitsiegkpviirvlkvSGTikkaee 102
                 L l++++eg++  + v+   ++i+++e+
  MMETSP1325-20131115|4283_1 253 LELLREMEGRSLRPDVITYNAAISACEQ 280
                 788999******************9997 PP

  == domain 7    score: -0.6 bits;  conditional E-value: 1.1
  PF01900.14  73 aaLtlitsiegkpviirvlkvSGTikkaee 102
                 +aL l++++e +   ++v+   ++i+++++
  MMETSP1325-20131115|4283_1 286 MALKLLREMEARGLEPNVITYNAAISACQK 315
                 79**************************97 PP

  == domain 8    score: -3.5 bits;  conditional E-value: 9.1
  PF01900.14  14 sseelspkellkaireav 31 
                  +++l +++l++++r+++
  MMETSP1325-20131115|4283_1 626 LNDNLGRATLYNTVRSEC 643
                 568899999999999986 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1      0.14   1.3e+02       9      31 ..     101     123 ..      95     131 .. 0.80
   2 ?    3.2   0.0      0.17   1.7e+02       7      31 ..     134     158 ..     128     168 .. 0.81
   3 ?    0.3   0.0       1.4   1.4e+03       8      27 ..     170     189 ..     163     195 .. 0.82
   4 ?    4.2   0.0      0.08        78       9      29 ..     206     226 ..     200     233 .. 0.82
   5 ?    3.6   0.0      0.12   1.2e+02       4      28 ..     236     260 ..     233     272 .. 0.81
   6 !    7.7   0.1    0.0058       5.7       4      31 ..     271     298 ..     268     310 .. 0.83
   7 ?    0.9   0.1       0.9   8.8e+02      15      32 ..     316     334 ..     303     340 .. 0.72

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.14
   PF13428.1   9 rallalGdpdeAiallrralala 31 
                  a++   ++++A++llr++ a++
  MMETSP1325-20131115|4283_1 101 SACEKGRQWKRALELLREMQARG 123
                 56777889**********97765 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.17
   PF13428.1   7 larallalGdpdeAiallrralala 31 
                    a++  G+++++++llr++ a++
  MMETSP1325-20131115|4283_1 134 TISACEKGGQWQRGLELLREMKAQG 158
                 56788999***********996654 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 1.4
   PF13428.1   8 arallalGdpdeAiallrra 27 
                   a++  G+++ A++ll ++
  MMETSP1325-20131115|4283_1 170 ISACEKGGQWEMALELLHEM 189
                 5788899*********9876 PP

  == domain 4    score: 4.2 bits;  conditional E-value: 0.08
   PF13428.1   9 rallalGdpdeAiallrrala 29 
                  a++  G++++A++ll+++ +
  MMETSP1325-20131115|4283_1 206 SACEKGGQWERALELLDEIKS 226
                 577889**********99855 PP

  == domain 5    score: 3.6 bits;  conditional E-value: 0.12
   PF13428.1   4 llalarallalGdpdeAiallrral 28 
                 + a   a++  G+++++++llr++ 
  MMETSP1325-20131115|4283_1 236 YNAAISACEKGGQWQRGLELLREME 260
                 56778899999***********984 PP

  == domain 6    score: 7.7 bits;  conditional E-value: 0.0058
   PF13428.1   4 llalarallalGdpdeAiallrralala 31 
                 + a   a+++ G+++ A++llr++ a++
  MMETSP1325-20131115|4283_1 271 YNAAISACEQGGQWEMALKLLREMEARG 298
                 567788999**************99876 PP

  == domain 7    score: 0.9 bits;  conditional E-value: 0.9
   PF13428.1  15 G.dpdeAiallrralalaP 32 
                 G +++ A++llr++ a++ 
  MMETSP1325-20131115|4283_1 316 GvQWEHAAQLLREMEARGL 334
                 448999*******999875 PP

>> PF08967.5  Domain of unknown function (DUF1884)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.81   7.9e+02      18      32 ..     116     130 ..     111     135 .. 0.86
   2 ?    3.0   0.0     0.096        94      18      32 ..     151     165 ..     148     191 .. 0.88
   3 ?    2.0   0.0      0.19   1.9e+02      17      32 ..     220     235 ..     215     241 .. 0.86
   4 ?   -0.1   0.0      0.91   8.9e+02      18      32 ..     291     305 ..     285     311 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.81
   PF08967.5  18 ineLkeeGfePdiiL 32 
                 + e+++ G+eP++i 
  MMETSP1325-20131115|4283_1 116 LREMQARGLEPNVIT 130
                 6899*********95 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.096
   PF08967.5  18 ineLkeeGfePdiiL 32 
                 + e+k++G+eP++i 
  MMETSP1325-20131115|4283_1 151 LREMKAQGLEPNVIT 165
                 689**********96 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.19
   PF08967.5  17 kineLkeeGfePdiiL 32 
                  ++e+k+ G+eP++i 
  MMETSP1325-20131115|4283_1 220 LLDEIKSRGLEPNVIT 235
                 578***********95 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 0.91
   PF08967.5  18 ineLkeeGfePdiiL 32 
                 + e+++ G+eP++i 
  MMETSP1325-20131115|4283_1 291 LREMEARGLEPNVIT 305
                 67999********95 PP

>> PF06239.6  Evolutionarily conserved signalling intermediate in Toll pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.27   2.7e+02     117     143 ..     106     132 ..     102     143 .. 0.83
   2 ?   -1.4   0.0      0.77   7.5e+02     119     141 ..     143     165 ..     138     172 .. 0.84
   3 ?   -2.3   0.0       1.5   1.4e+03     119     138 ..     178     197 ..     173     201 .. 0.84
   4 ?   -1.9   0.0       1.1   1.1e+03     119     142 ..     248     271 ..     244     277 .. 0.82
   5 ?    2.9   0.0     0.038        37     119     143 ..     283     307 ..     279     329 .. 0.86
   6 ?   -2.0   0.0       1.2   1.2e+03     119     138 ..     318     337 ..     311     339 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.27
   PF06239.6 117 prqqelaidvLeqmeeygvmPdketea 143
                  rq + a+++L +m+  g+ P+  t++
  MMETSP1325-20131115|4283_1 106 GRQWKRALELLREMQARGLEPNVITYN 132
                 688889999**********99987665 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.77
   PF06239.6 119 qqelaidvLeqmeeygvmPdket 141
                 q + ++++L +m+ +g+ P+  t
  MMETSP1325-20131115|4283_1 143 QWQRGLELLREMKAQGLEPNVIT 165
                 6678899************9766 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 1.5
   PF06239.6 119 qqelaidvLeqmeeygvmPd 138
                 q e+a+++L +me  g++ +
  MMETSP1325-20131115|4283_1 178 QWEMALELLHEMEGRGLKAN 197
                 7899*********9988755 PP

  == domain 4    score: -1.9 bits;  conditional E-value: 1.1
   PF06239.6 119 qqelaidvLeqmeeygvmPdkete 142
                 q + ++++L +me   + Pd  t+
  MMETSP1325-20131115|4283_1 248 QWQRGLELLREMEGRSLRPDVITY 271
                 6677899********999997665 PP

  == domain 5    score: 2.9 bits;  conditional E-value: 0.038
   PF06239.6 119 qqelaidvLeqmeeygvmPdketea 143
                 q e+a+++L +me  g+ P+  t++
  MMETSP1325-20131115|4283_1 283 QWEMALKLLREMEARGLEPNVITYN 307
                 77999**************987765 PP

  == domain 6    score: -2.0 bits;  conditional E-value: 1.2
   PF06239.6 119 qqelaidvLeqmeeygvmPd 138
                 q e a ++L +me  g++P+
  MMETSP1325-20131115|4283_1 318 QWEHAAQLLREMEARGLKPK 337
                 6677889***********97 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.97   9.5e+02      11      25 ..     104     118 ..      96     122 .. 0.78
   2 ?   -1.5   0.0       4.3   4.2e+03      11      25 ..     139     153 ..     135     156 .. 0.83
   3 ?   -1.9   0.0       5.6   5.5e+03      11      23 ..     174     186 ..     171     188 .. 0.81
   4 ?    4.6   0.0     0.048        47      11      26 ..     209     224 ..     205     227 .. 0.83
   5 ?    1.1   0.0      0.63   6.2e+02       4      25 ..     236     258 ..     235     259 .. 0.84
   6 ?    2.7   0.0      0.19   1.9e+02       4      25 ..     271     293 ..     268     296 .. 0.87
   7 ?   -2.6   0.1       9.6   9.4e+03       4      25 ..     306     328 ..     306     329 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.97
                 HHHHHHHHHHHHHHH CS
   PF13174.1  11 yklgdtdeAlealer 25 
                 +k+ ++ +Ale+l++
  MMETSP1325-20131115|4283_1 104 EKGRQWKRALELLRE 118
                 4577********987 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 4.3
                 HHHHHHHHHHHHHHH CS
   PF13174.1  11 yklgdtdeAlealer 25 
                 +k+g++++ le+l++
  MMETSP1325-20131115|4283_1 139 EKGGQWQRGLELLRE 153
                 6799****9999986 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 5.6
                 HHHHHHHHHHHHH CS
   PF13174.1  11 yklgdtdeAleal 23 
                 +k+g+++ Ale+l
  MMETSP1325-20131115|4283_1 174 EKGGQWEMALELL 186
                 6799*****9987 PP

  == domain 4    score: 4.6 bits;  conditional E-value: 0.048
                 HHHHHHHHHHHHHHHH CS
   PF13174.1  11 yklgdtdeAlealerl 26 
                 +k+g++++Ale+l+++
  MMETSP1325-20131115|4283_1 209 EKGGQWERALELLDEI 224
                 6799*********987 PP

  == domain 5    score: 1.1 bits;  conditional E-value: 0.63
                 HHHHHHHHH.HHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyk.lgdtdeAlealer 25 
                 y++a s  + +g++++ le+l++
  MMETSP1325-20131115|4283_1 236 YNAAISACEkGGQWQRGLELLRE 258
                 888877777699*****999985 PP

  == domain 6    score: 2.7 bits;  conditional E-value: 0.19
                 HHHHHHHHH.HHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyk.lgdtdeAlealer 25 
                 y++a s  + +g+++ Al++l++
  MMETSP1325-20131115|4283_1 271 YNAAISACEqGGQWEMALKLLRE 293
                 899988888578*******9986 PP

  == domain 7    score: -2.6 bits;  conditional E-value: 9.6
                 HHHHHHHHHHH.HHHHHHHHHHH CS
   PF13174.1   4 yklalsyyklg.dtdeAlealer 25 
                 y++a s  + g +++ A ++l++
  MMETSP1325-20131115|4283_1 306 YNAAISACQKGvQWEHAAQLLRE 328
                 78888888888899999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (817 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 1.33u 0.38s 00:00:01.71 Elapsed: 00:00:00.67
# Mc/sec: 2922.12
//
Query:       MMETSP1325-20131115|4286_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-05   23.7   9.1    1.7e-05   23.4   6.3    1.0  1  PF00999.16 Sodium/hydrogen exchanger family
  ------ inclusion threshold ------
        1.5    9.0   6.9        1.9    8.7   4.8    1.2  1  PF03203.9  MerC mercury resistance protein
        9.2    4.9   9.7         11    4.6   6.7    1.1  1  PF12805.2  FUSC-like inner membrane protein yccS


Domain annotation for each model (and alignments):
>> PF00999.16  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   6.3   3.7e-09   1.7e-05      86     167 ..      38     117 ..      28     120 .. 0.79

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 3.7e-09
                 XXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXGGGXXHHHHHHHH.HHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF00999.16  86 lgvlisflliGlllallllilglslleallfgallsatdpvvvlavlkeegrvnkrlgtlilgesvlnDavavvllavlial 167
                 l v+  f++  l+l   + +    + e+ l++++++++++ vv+ +l++ ++ ++ +gt+++ + +++D+++ +lla+  a+
  MMETSP1325-20131115|4286_1  38 LFVVMLFVI-TLILVQ-AASISSTWMEGTLLALAMALSSTSVVMETLVHTRLRDSLYGTVVIEIMAVQDLFMAPLLAIPTAI 117
                 222222222.444442.2456779*****************************************************97766 PP

>> PF03203.9  MerC mercury resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   4.8   0.00042       1.9      20      90 ..      43     112 ..      36     121 .] 0.79

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00042
   PF03203.9  20 plllallpalgglllleelfhelllvvalliallalllgyrkhrsllvlvlgliGlvllllalfleealep 90 
                  +++ l+ ++ +  + + +++ +ll++a+ ++ +++++ ++ h +l+  + g++ + +++++++++ +l +
  MMETSP1325-20131115|4286_1  43 LFVITLI-LVQAASISSTWMEGTLLALAMALSSTSVVMETLVHTRLRDSLYGTVVIEIMAVQDLFMAPLLA 112
                 2222222.2223347999*********************************************99999876 PP

>> PF12805.2  FUSC-like inner membrane protein yccS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   6.7    0.0025        11       3      69 ..      44     109 ..      37     118 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0025
   PF12805.2   3 lvtllcfalaslsvqllfpypwlfllglalstflfimlgalGqryatiafatLlvaiytmlgasesp 69 
                 +v++l   + ++s+  + +   l++l++als+ +++m + +  r +    +t+++ i+++  ++++p
  MMETSP1325-20131115|4286_1  44 FVITLIL-VQAASISSTWMEGTLLALAMALSSTSVVMETLVHTRLRDSLYGTVVIEIMAVQDLFMAP 109
                 3333333.566666677778999************************************99988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       858  (0.062756); expected 273.4 (0.02)
Passed bias filter:                      415  (0.030354); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 616.93
//
Query:       MMETSP1325-20131115|4284_1  [L=623]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.9e-255  847.3   9.8   4.4e-255  847.1   6.8    1.0  1  PF00012.15 Hsp70 protein
    1.4e-14   53.3   0.6    2.2e-14   52.6   0.4    1.2  1  PF06723.8  MreB/Mbl protein
     0.0036   16.3   1.3     0.0077   15.2   0.2    1.9  2  PF01968.13 Hydantoinase/oxoprolinase
     0.0076   15.8   0.0      0.032   13.7   0.0    2.1  2  PF02782.11 FGGY family of carbohydrate kinases, C-terminal domain
  ------ inclusion threshold ------
        0.2   11.8   2.6       0.25   11.5   0.1    2.3  2  PF07319.6  Primosomal protein DnaI N-terminus
        0.4    9.5   5.1       0.25   10.1   0.3    2.1  2  PF04518.7  Effector from type III secretion system
       0.81    9.6   6.3        1.5    8.8   0.1    3.7  3  PF11964.3  Protein of unknown function (DUF3478)


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  847.1   6.8  2.3e-258  4.4e-255      10     602 .]       2     601 ..       1     601 [. 0.99

  Alignments for each domain:
  == domain 1    score: 847.1 bits;  conditional E-value: 2.3e-258
                 EEBXEEEXXXXEEEXXXTTXXSSEESEEEEXXX.SEEXXXCCCTTTTTTGGGEEEXGGGTXXXBTTSTTHHHHHHHXSSEEEEETTTEEEEEEEXX..EEEEXHHHHHHHHHHHHHHHHHHHHSS.XXEEEEEEXTTXXHHHHHHHHHHHHHXXXEEEEEEEHHHHHHHHXXXTTSX.XEEEEEEEEXXXXEEEEEEEEEXXEEEEEEEEEETTXXXXHHHHHHHHHHHHHHHHHSS.XGGGSHHHHHHHHHHHHHHHHHTTCSSCSEEEEEEEEEETXTEEEEEEEEHHHHHHHCHHHHCTTTHHHHHHHHHCTXXCCCESEEEEEXXETTSHHHHHHHHHHTX.XXEEXSSXTTTTTTXXXTTCHHHCSSS..SXXXXXXECEEESS-E-EEEEE--EEEEESTTCESSEEEEEEEEESCCCESSEEEEEEES-GSSGGGSEEEEEEEEE---S-------EEEEEEE-----EEEEEEESE---EEEEEE-TT--.--HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC....GGGSSHHHH...HHHHHHHHHHHHHHT----HHHHHHHHHHHHHCHHHHHHHHHH CS
  PF00012.15  10 nsvvavmeggkvevianeegnrttPsvvaFtkk.erlvGeaAkrqavtnpkntvfsvkrliGrkfsdpevqkeikhlpykvvkkengkavvevealgekkkftpeeisamvLkklketaeaylgekvtdavitvPaYFndaqRqatkdAgkiAGLnvlRivneptaaalaYGldkkdkernvlvfDlGggtfdvSileiedGvfevkatagDthlGGedfDealvehlveefkkkegidlskdkkalqrLreaaekaKkeLSsssqteinleietldedgkdlsekltRakfeeLvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsksvnpDeavAiGaAvqaavlsge..eevkdllllDvtpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelakdnkllgkfeltgippaprGvpqieVtfdidanGiltvsakdkstgkeekitieaseg.lsedeiekmvkeaeesaeedkkkkeaieakneleelvyslekkleee....kekvseaek...ekkveeaieelkeelegedkeeieakleelekvvekiveklye 602
                 +s+v+v+++g+ve+i n++gnr+tPs+v+++++ erl+G+aAk+qa++np++tvf+vkrliGrk+sd++vq+++k lp+k+++k ++k++vev+++ge k+f+pee+samvL k+++taea++g+++++av+tvPaYFndaqRqatkdAg+i G+ v Ri+neptaaa+aYG+dkk  e+n+lvfDlGggtfdv +l+i++Gvfev+at+gDthlGGedfD+++++++++ +kkke++d+++dk+a+q+Lr+++e++K++LSs  q++++leie++ + g+d+se+ltRa+feeL++dl+++tl pv k+l+d++lkk e+de+vlvGGstRiPkvq+l+k++f+ keps+++npDeavA+GaAvq+++lsge  ee++dllllDvtpLs giet ggvmtkli+rnt+iptkk+q+fst++dnq+av i+v++ger+++kdn+llgkfeltgippaprGvpqieVtf+idanGil+vsa+dk+tgk e+iti+a++g lse++ie+mv+eaee+aeedkk k++i+akn le ++y+l+++le++    ++k+se++k    ++++ea+++l+e+  + ++ee+ +k++e+e+v+++i+++ly+
  MMETSP1325-20131115|4284_1   2   601
                 8**********************************************************************************9.99********************************************************************************************************************************************************************************..9************.*****************************************************************99**************************98899***********************************************************************************************************************************************************************998899999999999888899***********5.8889******************99986 PP

>> PF06723.8  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.4   1.1e-17   2.2e-14      92     315 ..     126     360 ..     105     365 .. 0.81

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 1.1e-17
                 S--EEEE-------HHHHHHHHH--------EEEE--HHHHHH------TTS----.EEEE-----EEEEEE----EE.....EEEEES----HHHHHHHHH....HHHHHSB---..-HHHHHHHHH----S--HHHH.-EEE---BTT------EEE----HHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHH---EEE---------HHHHHHH----.-EE-SSTTTTTT--- CS
   PF06723.8  92 skprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpveepsgn.mvvdiGggttevavislggiv.....tsksvrvaGdeldeaiiky....irkkynlliG..ertaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLektppeLaadivdrgivltGGgallkgldkllseetglp.vkvaedpltcvakGt 315
                   ++ v++vP   ++ +r+A k+a +  G +   +i+ep aAAi  g++ +  + n +v d+Gggt +v+++++ + v     t    +++G+++d+ i++y    ++kk ++ i   +r  +k++ e+  ++   +++ + +++   ++ g+  + +++ ++ +e   + +++ +  v +vLe+   +L +  vd+ +vl+GG++ +  +++ll++ ++ +  + + +p ++va G+
  MMETSP1325-20131115|4284_1 126 DIKHAVVTVPAYFNDAQRQATKDAGTISGMTVQRIINEPTAAAIAYGMDKKGGEKNiLVFDLGGGTFDVTLLTIDNGVfevlaTNGDTHLGGEDFDQRIMQYfikmLKKKEDVDIAsdKRAMQKLRREVERVKRALSSQhQARLEIESILDGVDVSETLTRARFEELNMDLFKKTLVPVGKVLED--GDLKKAEVDE-LVLVGGSTRIPKVQQLLKDYFNGKePSRGINPDEAVAYGA 360
                 456789*******************************************99877663688*************9764412222456789**********9995444577888888622567789999999988776655588888899************************************8..5888887876.6778***************987541456677777777776 PP

>> PF01968.13  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.2   3.9e-06    0.0077      51      95 ..     153     198 ..     145     215 .. 0.79
   2 ?   -1.8   0.0      0.58   1.1e+03     197     251 ..     246     328 ..     223     363 .. 0.49

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 3.9e-06
  PF01968.13  51 rekpvetilSGPaagvvgaaa.elaglknaivvDvGGTstDvalis 95 
                 ++  v+ i   P+a ++++ + +  g+kn++v+D GG ++Dv l++
  MMETSP1325-20131115|4284_1 153 SGMTVQRIINEPTAAAIAYGMdKKGGEKNILVFDLGGGTFDVTLLT 198
                 556677777889999999999999******************8753 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.58
  PF01968.13 197 afeelakelslk............................veevaegllsvagetmadairvlsvqrgkdkkelplvlfGGag 251
                 a+++l+ e+++                                ++e  +++  +t+    +vl +   k+ +   lvl+GG+ 
  MMETSP1325-20131115|4284_1 246 AMQKLRREVERVkralssqhqarleiesildgvdvsetltRARFEELNMDLFKKTLVPVGKVLEDGDLKKAEVDELVLVGGST 328
                 33333333332222222223344444455555554455554444444444444555555555555555666666666666665 PP

>> PF02782.11  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.7e-05     0.032     134     195 ..     285     366 ..     252     368 .. 0.84
   2 ?   -2.8   0.0       1.9   3.8e+03      78     109 ..     414     445 ..     391     453 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.7e-05
  PF02782.11 134 lrailealekd..................sgaplsrlavdGGgsrndllmqllAdilg..vpVerprtaeatalGaAllAav 195
                 +ra++e+l+ d                  ++a++++l+++GG +r + ++qll d ++   p + + ++ea+a GaA+ +++
  MMETSP1325-20131115|4284_1 285 TRARFEELNMDlfkktlvpvgkvledgdlKKAEVDELVLVGGSTRIPKVQQLLKDYFNgkEPSRGINPDEAVAYGAAVQGGI 366
                 566666666667777777777777777778889*************************9999888899**********9875 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 1.9
  PF02782.11  78 aaaavedaggvvfvpafsGlrapywdpdargt 109
                   ++ +d++  v++  f G+r+   d+++ g 
  MMETSP1325-20131115|4284_1 414 TFSTYQDNQPAVLIQVFEGERSMTKDNHLLGK 445
                 44566777778888899999999999887665 PP

>> PF07319.6  Primosomal protein DnaI N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.3       1.3   2.6e+03       1      36 [.     247     282 ..     225     302 .. 0.64
   2 ?   11.5   0.1   0.00013      0.25      39      80 ..     491     533 ..     488     540 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.3
                 ---------------HHHHHHHHHHHHHTT-HHHHH CS
   PF07319.6   1 MesigetlkkllkkrklekryeklkkevlkdpdVqa 36 
                 M++++++++++++  + +++ +  ++++l+  dV +
  MMETSP1325-20131115|4284_1 247 MQKLRREVERVKRALSSQHQARLEIESILDGVDVSE 282
                 566666666666666666666655666666666655 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00013
                 HHSTTT--HHHHHHTHHHHHHHHHS-SS-TT.TTS--S----E CS
   PF07319.6  39 kehkeeltqeeierslsklyeyveekkkiae.edeknlakGYe 80 
                  ++k +l++e ier +++  e++ee kk++   d kn ++GY 
  MMETSP1325-20131115|4284_1 491 TAEKGRLSEEDIERMVQEAEEFAEEDKKVKArIDAKNGLEGYL 533
                 57889************************9988999*****95 PP

>> PF04518.7  Effector from type III secretion system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.3   0.00013      0.25     198     250 ..     242     294 ..     226     301 .. 0.88
   2 ?    1.0   0.3     0.077   1.5e+02     203     254 ..     509     565 ..     494     573 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00013
   PF04518.7 198 syeealaklekEkeqirsdikscerakavleellakvkadakltseqkkelld 250
                 s ++a++kl +E e++++ + s ++a+ ++e +l+ v   ++lt ++ +el+ 
  MMETSP1325-20131115|4284_1 242 SDKRAMQKLRREVERVKRALSSQHQARLEIESILDGVDVSETLTRARFEELNM 294
                 56789****************************************99998876 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.077
   PF04518.7 203 laklekEkeqirsdikscerakavleellakvkada.....kltseqkkelldtlns 254
                 ++++++E +++++ i+  +  +  l +l +  + d+     kl++e k+el +t+n+
  MMETSP1325-20131115|4284_1 509 AEEFAEEDKKVKARIDAKNGLEGYLYNLKNTLEDDEkgladKLSEEDKEELDNTINE 565
                 456889999999999999999999999999999998888889*********999986 PP

>> PF11964.3  Protein of unknown function (DUF3478)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.27   5.3e+02      11      48 ..     205     243 ..     196     255 .. 0.83
   2 ?    8.8   0.1   0.00075       1.5      18      55 ..     494     532 ..     479     548 .. 0.84
   3 ?    0.2   0.1      0.34   6.7e+02      19      38 ..     549     568 ..     545     576 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.27
                 EEEEEE------HHHH.HHHHHHH---GG--SS--EEEE CS
   PF11964.3  11 nvlaievsGklteedy.eelipaleekleehgkvrllvd 48 
                  vla + + +l  ed+ +++ + + ++l++++ v++  d
  MMETSP1325-20131115|4284_1 205 EVLATNGDTHLGGEDFdQRIMQYFIKMLKKKEDVDIASD 243
                 578888899999************9****9999998765 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00075
                 -----HHHHHHHHHHH---GG--SS--EEEE-T.T---- CS
   PF11964.3  18 sGklteedyeelipaleekleehgkvrllvdle.efegw 55 
                 +G+l+eed+e+++++ ee  ee +kv+  +d++  +eg+
  MMETSP1325-20131115|4284_1 494 KGRLSEEDIERMVQEAEEFAEEDKKVKARIDAKnGLEGY 532
                 69**************************99999888886 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 0.34
                 ----HHHHHHHHHHH---GG CS
   PF11964.3  19 Gklteedyeelipaleekle 38 
                 +kl+eed eel ++++e+l+
  MMETSP1325-20131115|4284_1 549 DKLSEEDKEELDNTINEALD 568
                 78999999999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1126  (0.0823581); expected 273.4 (0.02)
Passed bias filter:                      503  (0.0367905); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.14u 0.37s 00:00:01.50 Elapsed: 00:00:00.63
# Mc/sec: 2369.73
//
Query:       MMETSP1325-20131115|4290_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-14   52.5   2.3      4e-14   51.9   1.6    1.3  1  PF13639.1  Ring finger domain
    4.3e-09   35.9   1.0    6.5e-09   35.3   0.7    1.3  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    3.3e-06   27.0   2.3      9e-06   25.6   1.6    1.8  1  PF12678.2  RING-H2 zinc finger
    8.8e-06   25.4   1.5    1.5e-05   24.7   1.1    1.4  1  PF11793.3  FANCL C-terminal domain
    4.6e-05   23.2   1.4    8.1e-05   22.4   1.0    1.4  1  PF12906.2  RING-variant domain
    0.00014   21.3   0.1    0.00035   20.0   0.1    1.7  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
     0.0016   17.9   1.1     0.0028   17.1   0.8    1.4  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
     0.0022   17.5   0.0     0.0033   16.9   0.0    1.2  1  PF10208.4  Degradation arginine-rich protein for mis-folding
     0.0023   17.6   0.1     0.0035   17.0   0.1    1.2  1  PF05883.6  Baculovirus U-box/Ring-like domain
  ------ inclusion threshold ------
       0.01   15.8   1.0      0.017   15.1   0.7    1.4  1  PF13771.1  PHD-like zinc-binding domain
      0.016   15.0   0.9      0.024   14.4   0.6    1.3  1  PF13832.1  PHD-zinc-finger like domain
      0.036   13.7   3.0       0.11   12.2   1.9    2.0  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   1.6   3.5e-17     4e-14       2      45 ..     116     177 ..     115     178 .] 0.85

  Alignments for each domain:
  == domain 1    score: 51.9 bits;  conditional E-value: 3.5e-17
   PF13639.1   2 eCaiCldelsegeevvrlpC.....gHvfHeeCldewlrssn.............sCPlCrk 45 
                 +C+iC+++++eg+++++l+C     +H fH +C+d+wl ++               CPlC+k
  MMETSP1325-20131115|4290_1 116 QCVICMEDYEEGDSLRVLRCgkagaHHRFHLTCIDQWLYTQAnrepalgeeykapGCPLCQK 177
                 8*******************666666************66533567788888889*****86 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.7   5.7e-12   6.5e-09       2      45 ..     114     176 ..     113     177 .. 0.82

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 5.7e-12
   PF13923.1   2 rfsCpiCleelen..pviltpCg.....HlyCkkCieqwleks............kkkCPiCr 45 
                 +  C+iC+e++e+   + +++Cg     H ++ +Ci+qwl ++             + CP+C+
  MMETSP1325-20131115|4290_1 114 DTQCVICMEDYEEgdSLRVLRCGkagahHRFHLTCIDQWLYTQanrepalgeeykAPGCPLCQ 176
                 678********99997778****9***777**********998777666665554445****7 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   1.6   7.9e-09     9e-06      19      75 .]     113     176 ..      88     176 .. 0.74

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 7.9e-09
   PF12678.2  19 edn.CaiCrneleelcpeckapgksdecpv.awge..CgHaFHlhCiskWlktrk.............tCPlcr 75 
                 +d+ C+iC +++         +g  d+  v   g+   +H FHl Ci +Wl t+               CPlc+
  MMETSP1325-20131115|4290_1 113 SDTqCVICMEDY--------EEG--DSLRVlRCGKagAHHRFHLTCIDQWLYTQAnrepalgeeykapGCPLCQ 176
                 4545********........233..34333222222289************88877889999999888899985 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   1.1   1.3e-08   1.5e-05       3      63 ..     115     177 ..     113     178 .] 0.87

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 1.3e-08
                 -S-SSS--SS--------B--S-TT----B-SGGGHHHHHHHH----TTT---..---TTT-S CS
   PF11793.3   3 veCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrslkesrqsfdvlf..GeCPyCkk 63 
                 ++C iC+    + +++ +  C  +   ++fH +C+ +Wl ++ + +  +   +    CP C+k
  MMETSP1325-20131115|4290_1 115 TQCVICMEDYEEGDSLRVLRCGKAGAHHRFHLTCIDQWLYTQANREPALGEEYkaPGCPLCQK 177
                 79****************************************999998865541156999986 PP

>> PF12906.2  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   1.0   7.1e-08   8.1e-05       1      47 []     117     175 ..     117     175 .. 0.82

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 7.1e-08
                 ETTTTEE-----...---------TTS--HHHHHHHHHHHT-SB...........-S-- CS
   PF12906.2   1 CriCleeeeesepl.irpCkCkGslklvHesCleeWlkesaktk...........CelC 47 
                 C+iC+e+ ee ++l +  C   G  + +H +C+++Wl ++a+++           C lC
  MMETSP1325-20131115|4290_1 117 CVICMEDYEEGDSLrVLRCGKAGAHHRFHLTCIDQWLYTQANREpalgeeykapgCPLC 175
                 *******98888663789999*****************977776666666666777777 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1     3e-07   0.00035       1      41 []     117     175 ..     117     175 .. 0.87

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 3e-07
                 -TTTSSS-SSEE...BSCTS.....-EE-CHHHHHHHCS...........T-----TTT CS
  PF00097.20   1 CpiCleeakepn..elleCk.....HsfCskCirkilks...........rkkvkCPlC 41 
                 C iC+e ++e +  ++l C+     H+f+ +Ci+++l +            k+  CPlC
  MMETSP1325-20131115|4290_1 117 CVICMEDYEEGDslRVLRCGkagahHRFHLTCIDQWLYTqanrepalgeeYKAPGCPLC 175
                 9*********99999999966666599**********99999*****97555566***9 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.8   2.4e-06    0.0028       2      45 ..     114     177 ..     113     178 .] 0.85

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 2.4e-06
   PF13920.1   2 kktCvvCle...readvlllpCg....HlclCeeCaerllk.............rkkkCpiCrs 45 
                 +++Cv+C+e   +  +  +l+Cg    H  +  +C +++l              +   Cp+C++
  MMETSP1325-20131115|4290_1 114 DTQCVICMEdyeEGDSLRVLRCGkagaHHRFHLTCIDQWLYtqanrepalgeeyKAPGCPLCQK 177
                 789******43224569999**88888666*********9899*******************97 PP

>> PF10208.4  Degradation arginine-rich protein for mis-folding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   2.9e-06    0.0033     104     144 ..      74     114 ..      64     123 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 2.9e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF10208.4 104 lkklkvkelkkilaeWgeeckgcleksdfikkieelkpkya 144
                 ++ + +kelk  la  +   +gc+eks++++k++e+ p  +
  MMETSP1325-20131115|4290_1  74 FEAMSAKELKSALATKQVPFHGCVEKSELLEKLKENSPSSD 114
                 67899*******************************99766 PP

>> PF05883.6  Baculovirus U-box/Ring-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   3.1e-06    0.0035      11      73 ..      99     161 ..      91     163 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 3.1e-06
   PF05883.6  11 keyleklfkelfkevsveCaiCldeieenkGvvavtekgtldleklfhkeClkrf.krekkrDP 73 
                 k+ l + +ke  +++ ++C iC+++ ee    + v   g++   + fh +C++++   + +r+P
  MMETSP1325-20131115|4290_1  99 KSELLEKLKENSPSSDTQCVICMEDYEE-GDSLRVLRCGKAGAHHRFHLTCIDQWlYTQANREP 161
                 566667778888999************9.667888899999**************435666666 PP

>> PF13771.1  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.7   1.4e-05     0.017       5      74 ..      85     157 ..      82     177 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.4e-05
   PF13771.1   5 alwipevvfenakelemepvesvekiakerrklkCslCkkk..kG...aciqCskkkCkrafHvtCakeagllle 74 
                 al +++v f++  e ++e +e++++ ++ + +++C++C +   +G    +++C k+  +++fH+tC  +  +++ 
  MMETSP1325-20131115|4290_1  85 ALATKQVPFHGCVE-KSELLEKLKE-NSPSSDTQCVICMEDyeEGdslRVLRCGKAGAHHRFHLTCIDQWLYTQA 157
                 56666666666665.4666666655.5557788******6655453336789**************988666555 PP

>> PF13832.1  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.6   2.1e-05     0.024      31      87 ..      89     151 ..      77     177 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.1e-05
   PF13832.1  31 pevsfs.neaemepvdvekivkerlklkcvlCkkk.....kGaciqCskgeCktafHvtCalk 87 
                 ++v f+  +++ e ++  k ++  +  +cv+C +      +   ++C k+  ++ fH tC+ +
  MMETSP1325-20131115|4290_1  89 KQVPFHgCVEKSELLEKLKENSPSSDTQCVICMEDyeegdSLRVLRCGKAGAHHRFHLTCIDQ 151
                 555554233334444422333334789******9999554345679**************987 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.9   9.5e-05      0.11      41      71 ..     126     159 ..     106     177 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 9.5e-05
   PF12861.2  41 pGddcplv.lGk..ckhnfhlhcilkwletetsk 71 
                  Gd   ++  Gk   +h fhl ci +wl t++ +
  MMETSP1325-20131115|4290_1 126 EGDSLRVLrCGKagAHHRFHLTCIDQWLYTQANR 159
                 4666554425665579************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.54
# Mc/sec: 789.91
//
Query:       MMETSP1325-20131115|4287_1  [L=450]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1925.64
//
Query:       MMETSP1325-20131115|4291_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-43  148.3   0.0    2.3e-43  148.0   0.0    1.0  1  PF00069.20 Protein kinase domain
    9.7e-19   67.3   0.0    1.3e-18   66.9   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    0.00039   19.6   0.0    0.00053   19.1   0.0    1.1  1  PF02241.13 Methyl-coenzyme M reductase beta subunit, C-terminal domain
     0.0074   15.9   0.0      0.013   15.1   0.0    1.4  1  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.025   14.6   0.1      0.048   13.7   0.1    1.5  1  PF00433.19 Protein kinase C terminal domain
      0.085   11.7   0.0       0.14   11.0   0.0    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.0   0.0     1e-46   2.3e-43      95     260 .]      12     181 ..       3     181 .. 0.93

  Alignments for each domain:
  == domain 1    score: 148.0 bits;  conditional E-value: 1e-46
                 B-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE.....CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--.....HHHHHTSGGH CS
  PF00069.20  95 lseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl.....eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRlt.....aeeilkhpwl 260
                 + e  + ++a  ++++ +y+H++g+++rDLKpeN+L+d+ g++ki+DFG+ak +      k   k  t++gt+eY++PE+++ +++++k+vD W+lG+++yell g++pf+++   +q+e+++ki + k + + pk  +  +++ dli++ll+++pa Rl      +++i+ hpw+
  MMETSP1325-20131115|4291_1  12 FIESAAMFYAGCVISAFQYVHDKGVAYRDLKPENLLIDSAGYCKIIDFGFAKRIpyekdGKVCAKSFTICGTPEYLSPELIQ-SSGHDKSVDYWALGCLVYELLVGSTPFQDD---NQREIFRKITNSKKHLSFPKGMN--PNAVDLIRRLLTPNPAFRLGnlsgaVDDIMDHPWF 181
                 567788999**********************************************86554555567789*************.******************************...*******************9977..*******************9999999********8 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   5.7e-22   1.3e-18     109     249 ..      21     164 ..       5     167 .. 0.88

  Alignments for each domain:
  == domain 1    score: 66.9 bits;  conditional E-value: 5.7e-22
                 HHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEES.TTTSCE.EESTT-E.ECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---TTSBHHHHHHHHHHT-SSGGGS CS
  PF07714.12 109 alqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardi.ekddyy.kkkeeak.lpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekpekcpeelyelmkqCweeepeeR 249
                 a  + ++ +y ++k +  rdL   N L+++   +ki DfG a++i +++d    +k+ +     ++++pE+++++   +  D W+ G+l++E++  g++p+++ +++e+++++ +++k+l+ p+ ++++  +l+++ ++ +p+ R
  MMETSP1325-20131115|4291_1  21 AGCVISAFQYVHDKGVAYRDLKPENLLIDSAGYCKIIDFGFAKRIpYEKDGKvCAKSFTIcGTPEYLSPELIQSSGHDKSVDYWALGCLVYELLV-GSTPFQDDNQREIFRKItNSKKHLSFPKGMNPNAVDLIRRLLTPNPAFR 164
                 55677899*************************************85555552333333336789*****************************9.99************999788999***************99999998877 PP

>> PF02241.13  Methyl-coenzyme M reductase beta subunit, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   2.3e-07   0.00053      19      66 ..       2      49 ..       1      54 [. 0.93

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 2.3e-07
                -HHHHHHHHHHHHHHHHHH--------HHHHH---------GGGHHHH CS
  PF02241.13 19 ntlnavalasileqtamfemgdavgaferlhllglayqglnadnlvld 66
                n+++ +al   +e +amf  g  + af+ +h  g+ay+ l+ +nl++d
  MMETSP1325-20131115|4291_1  2 NLIRRTALGGFIESAAMFYAGCVISAFQYVHDKGVAYRDLKPENLLID 49
                56778899*************************************998 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.7e-06     0.013     168     203 ..      36      70 ..      29      95 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 5.7e-06
                 EB-SS-SGGGEEEE.TTTTEEEE---TT-BBE-TCHH CS
  PF01636.18 168 llHgDlhpgNllvd.pddgrvgviDfedaglgpplyD 203
                 +  +Dl+p Nll+d ++     +iDf++a   p++ D
  MMETSP1325-20131115|4291_1  36 VAYRDLKPENLLIDsAGYC--KIIDFGFAKRIPYEKD 70 
                 6679**********33333..5*******99998766 PP

>> PF00433.19  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.1e-05     0.048       2      18 ..     207     223 ..     206     232 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.1e-05
                 -SSTTXXTCCTCCCCTS CS
  PF00433.19   2 vksptDTsNFDpeFtee 18 
                 ++ p DTsNFDp  +e 
  MMETSP1325-20131115|4291_1 207 IRDPLDTSNFDPYAEED 223
                 789*********65554 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.1e-05      0.14     131     170 ..      28      64 ..      20      73 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.1e-05
   PF06293.9 131 iakmhragvnHtdlnahnilldeeeekakvwliDldkarr 170
                 ++ +h+ gv+++dl + n+l+d  +    + +iD+  a+r
  MMETSP1325-20131115|4291_1  28 FQYVHDKGVAYRDLKPENLLIDSAG---YCKIIDFGFAKR 64 
                 6778********************9...******976665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.43s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 1123.00
//
Query:       MMETSP1325-20131115|4292_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1056.35
//
Query:       MMETSP1325-20131115|4293_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.5e-05   22.8   0.7    0.00031   20.4   0.0    2.3  2  PF12451.3 Vacuolar protein sorting protein 11 C terminal
  ------ inclusion threshold ------
      0.044   13.7   0.1       0.18   11.7   0.0    2.0  2  PF09687.5 Plasmodium RESA N-terminal


Domain annotation for each model (and alignments):
>> PF12451.3  Vacuolar protein sorting protein 11 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.11   7.8e+02      13      33 ..      82     102 ..      78     104 .. 0.83
   2 !   20.4   0.0   4.5e-08   0.00031       8      43 ..     220     255 ..     218     256 .] 0.93

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.11
   PF12451.3  13 aqeeskenhdlFknaLdsseD 33 
                 ++ee  e h+++++ L + eD
  MMETSP1325-20131115|4293_1  82 DEEELEECHEELIDLLTEIED 102
                 68999999*****99976665 PP

  == domain 2    score: 20.4 bits;  conditional E-value: 4.5e-08
   PF12451.3   8 kalkraqeeskenhdlFknaLdsseDrFkvVsdyfG 43 
                 ++++r+  + +  h++ + +L++s+D+F +V+ +fG
  MMETSP1325-20131115|4293_1 220 EEMQRSMTNAASHHEQNIRELEQSQDGFATVAGFFG 255
                 5788899999999**********************9 PP

>> PF09687.5  Plasmodium RESA N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.6e-05      0.18      64     129 .]      79     148 ..      46     148 .. 0.92
   2 ?   -1.0   0.1      0.22   1.5e+03      70      88 ..     218     236 ..     214     239 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.6e-05
   PF09687.5  64 eeikkklweeckkdltkelkklekeynknfynll....kkksvsldefkeflnscrkswkkllkklekkw 129
                 +   ++ +eec+++l + l ++e++ +   y+ +     + s+ l+  k+f+ +++++  + ++++e+k+
  MMETSP1325-20131115|4293_1  79 KCSDEEELEECHEELIDLLTEIEDHQELAPYQVVgilcSNPSLPLSVAKRFITKFMRAAVDAIRDNEEKC 148
                 5567999**************************999977779**************************98 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.22
   PF09687.5  70 lweeckkdltkelkkleke 88 
                 +wee + ++t+  + +e++
  MMETSP1325-20131115|4293_1 218 KWEEMQRSMTNAASHHEQN 236
                 69*******9999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       712  (0.0520772); expected 273.4 (0.02)
Passed bias filter:                      601  (0.0439585); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 1278.06
//
Query:       MMETSP1325-20131115|4295_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-13   49.9   0.0    2.2e-13   49.7   0.0    1.1  1  PF00933.16 Glycosyl hydrolase family 3 N terminal domain
     0.0038   16.6   0.0     0.0084   15.5   0.0    1.5  2  PF01915.17 Glycosyl hydrolase family 3 C-terminal domain


Domain annotation for each model (and alignments):
>> PF00933.16  Glycosyl hydrolase family 3 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.0   3.3e-17   2.2e-13     219     298 ..       2      84 ..       1      85 [. 0.89

  Alignments for each domain:
  == domain 1    score: 49.7 bits;  conditional E-value: 3.3e-17
                 --TTTT------EEES-TTSHHHHHH--....-HHHHHHHHH----BEES-S---SSHHHHHHHHH-----HHHHHHHHHHHHH CS
  PF00933.16 219 klLreelgFdGfVvsDwlamkeiadhgg....aaesavealkAGlDiempgeerteelealkeavkngkvpeerlddsvrrilr 298
                 ++Lr+ +gFdGfVvsD+ a  ++ + ++    +ae+a+  l+AG+D+e +  ++ + +ea+ ea+ +g+++ee++ ++ +r++r
  MMETSP1325-20131115|4295_1   2 GILRDAWGFDGFVVSDYDAWVNLVTTHQyvdtYAEAATVGLNAGMDQEGGFGTY-SVIEAMPEALAAGNITEEAITNAFTRLMR 84 
                 79**************99666665555559999999999*********999987.579***********************997 PP

>> PF01915.17  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.19   1.3e+03      23      62 ..      40      71 ..      28     127 .. 0.51
   2 !   15.5   0.0   1.2e-06    0.0084       1      24 [.     129     156 ..     129     157 .] 0.90

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.19
                EESSHH................HHHHHHHHHHHHHHTTSS CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01915.17 23 iGpnadgtvksgggsgavnpsylvtplegirarlskakvv 62
                +G na+  +  g+g+         +++e++ ++l++ + +
  MMETSP1325-20131115|4295_1 40 VGLNAGMDQEGGFGT--------YSVIEAMPEALAAGNIT 71
                555555423333322........34444444444444433 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 1.2e-06
                 -EEEEEGGG--S------....EEEEEE CS
                 xxxxxxxxxxxxxxxxxx....xxxxxx RF
  PF01915.17   1 iVLLkNegnlLPLkkkkk....kiaviG 24 
                 +VLLkN+g++LPL+ ++     ++a+iG
  MMETSP1325-20131115|4295_1 129 VVLLKNDGGALPLDASAFteegSLALIG 156
                 7**************9988888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 723.52
//
Query:       MMETSP1325-20131115|4294_1  [L=445]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     9e-111  370.9   0.0     1e-110  370.7   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  370.7   0.0  7.4e-115    1e-110     282     707 ..       1     441 [.       1     442 [. 0.93

  Alignments for each domain:
  == domain 1    score: 370.7 bits;  conditional E-value: 7.4e-115
  PF03028.10 282 gplGWnksYeFnegDlrisldvldnyleanapekvpwealryllgeimYGGritddfDrrllrtyleelfteelldeelelapkdesfkvPek...keyeeyleyieeLpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksreekvkqvlkdileklp..klfdkeelkekltaeeekdplvvvlvqEiermnillkeirrslkelskglkGeltiteeleellkallkdkvPasWakkaypslkgLaswlsdllkRikqlekwtedllkpktvwlsglfnpqsfltairQsvarknkwpLdklalqvevtkkekeetesapeegvyveGlfleGarwdlkekllaesklkellsalpviwvkaveadkkeeksvyecPvYktkaRke..................ltlvltlklktkekkskwilagvalll 707
                 gplGWn++YeFn++Dl isl +l+++l+++  e++p+ +l +l + i YGGr+td+ D r+++ +++ ++++e+l+e +++  ++++   P     + +++y+ey+e+Lp +  P ++GLh+Na+i+  + et  +++tll lq++  +   g++ +r+e++ + +k+i e+l     fd+++++  ++   +++++++vlvqE+ r n+l+  +++sl  l+k+lkG +++++ele+++++++++ vPa W++kayps+k+L++w  dl+ R++++ +w e+  +p ++w+sg+++pq+flt++rQ++ark ++++d++ +++ + ++  e+ +++p++g+y+ Gl++eGarw+ +   + +s +k+l+ + pv+ + +v+ ++  ek vy+cP+Yk   R++                   + +  l+ + + ++++wi+agva ++
  MMETSP1325-20131115|4294_1   1 GPLGWNIPYEFNDTDLDISLGQLEMFLDQY--EHIPFAELVFLSSYINYGGRVTDYIDLRTIDIIMRDFYRPEVLEEGHKFSDDGTY-VSPTFdpaNPHKSYTEYVEQLPLIAGPNVFGLHENANITCANAETFGMFDTLLSLQSKAGG---GKSDARDEMIGSHAKEIEERLMkrGMFDMDAIRLMYP-IMYNESMNTVLVQECIRYNKLIDVMEESLPMLQKALKGLVVLSKELEAMANSVAMNSVPAAWENKAYPSMKPLGAWADDLMARLDFIIDWVEH-NAPPVFWISGFYFPQAFLTGTRQNYARKMQYAIDTISFDYPIIDQPWETLKTKPADGAYIRGLYMEGARWNPEIRSIDDSLPKQLFTSFPVMLMSPVKDRQPTEKGVYRCPIYKILSRRGvlattghstnfvmwtevpSNRTHVLNYEKQADQEEWIKAGVACFC 441
                 8*****************************..*************************************************995544.46654333899*********************************************66555...6667799*************996778**********7.8899****************************************************************************************9.9*******************************************************************************************************************************6666655533333333333344488999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.63
# Mc/sec: 1692.66
//
Query:       MMETSP1325-20131115|4296_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-45  155.7   0.0    1.6e-45  155.1   0.0    1.3  1  PF00069.20 Protein kinase domain
    4.9e-18   62.8   2.2    3.6e-06   25.7   0.1    3.8  3  PF00036.27 EF hand
    7.4e-18   64.4   0.0    1.3e-17   63.6   0.0    1.4  1  PF07714.12 Protein tyrosine kinase
    1.9e-15   56.6   0.3    1.1e-09   38.1   0.0    2.7  2  PF13499.1  EF-hand domain pair
    9.5e-14   49.8   1.0    0.00012   21.5   0.0    4.4  4  PF13405.1  EF-hand domain
    2.8e-12   45.2   1.7    4.4e-05   22.5   0.0    3.7  3  PF13202.1  EF hand
    2.9e-11   42.7   6.4    0.00055   19.3   0.1    4.3  4  PF13833.1  EF-hand domain pair
    1.8e-05   24.4   0.4     0.0001   22.0   0.2    2.1  2  PF01636.18 Phosphotransferase enzyme family
    1.9e-05   24.2   0.2      0.078   12.6   0.0    3.0  3  PF12763.2  Cytoskeletal-regulatory complex EF hand
      0.003   16.5   0.1      0.011   14.7   0.0    1.8  2  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0035   16.5   0.0      0.011   14.9   0.0    1.8  1  PF10707.4  PhoP regulatory network protein YrbL
  ------ inclusion threshold ------
      0.029   13.8   0.3      0.069   12.6   0.1    1.7  2  PF01633.15 Choline/ethanolamine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.1   0.0   1.4e-48   1.6e-45      94     260 .]       2     170 ..       1     170 [. 0.91

  Alignments for each domain:
  == domain 1    score: 155.1 bits;  conditional E-value: 1.4e-48
                 CB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E...EE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20  94 klseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel...kiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 ++se+++ +++++il +l+y+H+ +iiHrDLKpeN+L+ +k++     i+DFGl++   + + e ++t+vgt++Y+APEvl   k+ytk++D+Ws+Gvi+y ll+g +pf+ge+++    +i+   ++    d   + s see+k+lik+ll+k+p++R+ta e++++p++
  MMETSP1325-20131115|4296_1   2 HYSEDDAARLMYSILDALDYCHNLNIIHRDLKPENFLFRDKSDEsdlVIIDFGLSRFGpQDEAEFMKTRVGTPYYIAPEVLG--KHYTKACDLWSVGVIMYILLSGVPPFYGETDQAIFDMIKAADTTLEFPDDLGWGSVSEEAKNLIKSLLQKNPDRRPTAPEAKTDPFF 170
                 5799**********************************966554566********977999999****************99..*****************************7777777777776666666677788999****************************97 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0     6e-08   6.9e-05       1      27 [.     220     246 ..     220     248 .. 0.93
   2 !   12.9   0.2     4e-05     0.046       2      26 ..     256     280 ..     255     283 .. 0.88
   3 !   25.7   0.1   3.1e-09   3.6e-06       2      26 ..     326     350 ..     325     353 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 6e-08
                 HHHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealk 27 
                 el+++Fk +D+Dg+G +s+ E+ +al+
  MMETSP1325-20131115|4296_1 220 ELEQVFKAIDTDGSGSLSLAELTTALE 246
                 799*******************99985 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 4e-05
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 +++++  +D Dgd  ++++Ef++a 
  MMETSP1325-20131115|4296_1 256 IEQIMIGIDFDGDQELDYQEFLAAT 280
                 7889999**************9986 PP

  == domain 3    score: 25.7 bits;  conditional E-value: 3.1e-09
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 ++e+++++D Dg G+I+feEfk+++
  MMETSP1325-20131115|4296_1 326 AREIMAKVDADGGGTIDFEEFKAMI 350
                 68********************996 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.0   1.2e-20   1.3e-17     102     252 ..       5     161 ..       1     167 [. 0.85

  Alignments for each domain:
  == domain 1    score: 63.6 bits;  conditional E-value: 1.2e-20
                 HHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---TT.....SBHHHHHHHHHHT-SSGGGS--H CS
  PF07714.12 102 lkdllkfalqiakGmeyLeskklvHrdLaarNvLlee...ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekpek.....cpeelyelmkqCweeepeeRptf 252
                  +d  ++++ i ++++y ++ +++HrdL   N L  +   e+   i DfGL+r    +d+ + ++++     ++apE+l  k++t++ D Ws Gv+++ +++ g  p+ g +++ +++++  +++ le p++     ++ee ++l+k+ ++++p++Rpt 
  MMETSP1325-20131115|4296_1   5 EDDAARLMYSILDALDYCHNLNIIHRDLKPENFLFRDksdESDLVIIDFGLSRFG-PQDEAEFMKTRVGTPYYIAPEVLG-KHYTKACDLWSVGVIMYILLS-GVPPFYGETDQAIFDMIkAADTTLEFPDDlgwgsVSEEAKNLIKSLLQKNPDRRPTA 161
                 567788999**************************98554568999*******99.55555566666667779****885.68***************9998.88***************66688899998633333699******************96 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   9.6e-13   1.1e-09       2      65 ..     221     279 ..     218     280 .. 0.93
   2 !   15.7   0.0   9.7e-06     0.011      39      66 .]     323     350 ..     285     350 .. 0.76

  Alignments for each domain:
  == domain 1    score: 38.1 bits;  conditional E-value: 9.6e-13
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 l+++Fk++D+dg+g+l+ +eL+ +l ++        +  ++++i+  +D +gd  l+++Efl+a
  MMETSP1325-20131115|4296_1 221 LEQVFKAIDTDGSGSLSLAELTTALEGA-----TPLLAAQIEQIMIGIDFDGDQELDYQEFLAA 279
                 7899*********************998.....57888899999*****************987 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 9.7e-06
   PF13499.1  39 revldyifkelDkngdGvlsfeEflqai 66 
                  e +++i++++D +g G+++feEf ++i
  MMETSP1325-20131115|4296_1 323 AEHAREIMAKVDADGGGTIDFEEFKAMI 350
                 3467888*****************9885 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.1e-07   0.00012       1      27 [.     220     246 ..     220     251 .. 0.93
   2 !    8.1   0.0    0.0021       2.4       9      25 ..     263     279 ..     257     286 .. 0.90
   3 ?   -0.6   0.0       1.3   1.5e+03       3      26 ..     293     320 ..     291     322 .. 0.55
   4 !   14.9   0.1   1.4e-05     0.016       3      27 ..     327     351 ..     325     359 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 1.1e-07
                 HHH---GCC-------B---HHHHHHH CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrdaLr 27 
                 el+++Fk++D+dg+G ++++EL  aL 
  MMETSP1325-20131115|4296_1 220 ELEQVFKAIDTDGSGSLSLAELTTALE 246
                 6899******************99996 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0021
                 C-------B---HHHHH CS
   PF13405.1   9 fDkdgdGkidaeELrda 25 
                 +D+dgd ++d +E+++a
  MMETSP1325-20131115|4296_1 263 IDFDGDQELDYQEFLAA 279
                 7*************886 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 1.3
                 H---GCC------....-B---HHHHHH CS
   PF13405.1   3 reaFklfDkdgdG....kidaeELrdaL 26 
                 ++aF+ + +  dG    +id+e L  ++
  MMETSP1325-20131115|4296_1 293 KSAFNGLTTMADGtkreEIDIEILTEIM 320
                 5666666555555333377776666555 PP

  == domain 4    score: 14.9 bits;  conditional E-value: 1.4e-05
                 H---GCC-------B---HHHHHHH CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                 re+  + D dg G+id+eE+++++ 
  MMETSP1325-20131115|4296_1 327 REIMAKVDADGGGTIDFEEFKAMIL 351
                 6777899*************99664 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   3.9e-08   4.4e-05       1      23 [.     221     243 ..     221     245 .. 0.91
   2 ?    0.3   0.1      0.39   4.5e+02       8      21 ..     263     276 ..     263     281 .. 0.79
   3 !   19.0   0.1   4.8e-07   0.00054       6      24 ..     331     349 ..     327     351 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 3.9e-08
                 HHHHHHHH--S----B-HHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkr 23 
                 l+++F+a+D++g+G +s  EL +
  MMETSP1325-20131115|4296_1 221 LEQVFKAIDTDGSGSLSLAELTT 243
                 6889*****************87 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.39
                 H--S----B-HHHH CS
   PF13202.1   8 fDlNgDGkIsreEL 21 
                 +D++gD  ++ +E+
  MMETSP1325-20131115|4296_1 263 IDFDGDQELDYQEF 276
                 79999977777777 PP

  == domain 3    score: 19.0 bits;  conditional E-value: 4.8e-07
                 HHH--S----B-HHHHHHH CS
   PF13202.1   6 rafDlNgDGkIsreELkrl 24 
                  ++D++g G+I++eE+k++
  MMETSP1325-20131115|4296_1 331 AKVDADGGGTIDFEEFKAM 349
                 689**************96 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       1.3   1.5e+03      23      36 ..     113     126 ..     113     127 .. 0.88
   2 !   16.9   0.0   2.8e-06    0.0031      26      52 ..     220     246 ..     198     248 .. 0.86
   3 !    6.9   0.0    0.0037       4.3      26      50 ..     255     279 ..     251     283 .. 0.85
   4 !   19.3   0.1   4.8e-07   0.00055      22      52 ..     321     351 ..     305     353 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 1.3
   PF13833.1  23 seeevdilfrefDt 36 
                 +++ + ++++++Dt
  MMETSP1325-20131115|4296_1 113 TDQAIFDMIKAADT 126
                 678899******98 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 2.8e-06
   PF13833.1  26 evdilfrefDtdgdGkisfeEFcvlle 52 
                 e++ +f+++Dtdg+G +s++E  ++le
  MMETSP1325-20131115|4296_1 220 ELEQVFKAIDTDGSGSLSLAELTTALE 246
                 68999****************988876 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0037
   PF13833.1  26 evdilfrefDtdgdGkisfeEFcvl 50 
                 +++ ++  +D+dgd  +++ EF+++
  MMETSP1325-20131115|4296_1 255 QIEQIMIGIDFDGDQELDYQEFLAA 279
                 567777789*************975 PP

  == domain 4    score: 19.3 bits;  conditional E-value: 4.8e-07
   PF13833.1  22 lseeevdilfrefDtdgdGkisfeEFcvlle 52 
                  s+e +++++ ++D+dg G i+feEF+++  
  MMETSP1325-20131115|4296_1 321 GSAEHAREIMAKVDADGGGTIDFEEFKAMIL 351
                 577779*********************9965 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.2   8.8e-08    0.0001     167     199 ..      26      60 ..       6      62 .. 0.88
   2 ?   -0.7   0.0      0.73   8.3e+02      56      94 ..     226     259 ..     210     262 .. 0.82

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 8.8e-08
                 EEB-SS-SGGGEEEE...TTTTEEEE---TT-BBE- CS
  PF01636.18 167 vllHgDlhpgNllvd...pddgrvgviDfedaglgp 199
                  ++H+Dl+p N l++   ++ + v +iDf+++++gp
  MMETSP1325-20131115|4296_1  26 NIIHRDLKPENFLFRdksDESDLV-IIDFGLSRFGP 60 
                 69**************87777777.*********98 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.73
                 BEEE..E-CSSCSCEEEEEE---HHBCCTCSHHHHHHHH CS
  PF01636.18  56 evlagdtdddvlgllfalleyvpgevlerklnarqlpal 94 
                 + ++  td+ +++ l++l + ++g++++    a+q++++
  MMETSP1325-20131115|4296_1 226 KAID--TDGSGSLSLAELTTALEGATPLL---AAQIEQI 259
                 4555..99999999************998...7777765 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.5   1.7e+03      71     100 ..     116     147 ..     113     149 .. 0.67
   2 !   12.6   0.0   6.9e-05     0.078       5      68 ..     214     279 ..     209     295 .. 0.79
   3 !    8.2   0.0    0.0015       1.7      16      69 ..     296     350 ..     281     360 .. 0.71

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.5
   PF12763.2  71 lifdlvngeik..dvPselPewlvpeskahlv 100
                  ifd++    +  + P++l    v+e  ++l+
  MMETSP1325-20131115|4296_1 116 AIFDMIKAADTtlEFPDDLGWGSVSEEAKNLI 147
                 699*9986544116688887777777777776 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 6.9e-05
   PF12763.2   5 eeleikkyweifsglkpe.dnkltgdkvapvlkns.kleedklekiwdladidedgkldfeefcia 68 
                    ei +  ++f++++ + +  l+  ++++ l+ +  l   ++e+i    d d d +ld++ef  a
  MMETSP1325-20131115|4296_1 214 TVNEIGELEQVFKAIDTDgSGSLSLAELTTALEGAtPLLAAQIEQIMIGIDFDGDQELDYQEFLAA 279
                 5567888889999987642678999999999986516999***********************754 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.0015
   PF12763.2  16 fsglkpednkltgdkv.apvlknskleedklekiwdladidedgkldfeefciam 69 
                 f+gl+   +  + +++   +l +   + ++  +i    d d  g++dfeef  ++
  MMETSP1325-20131115|4296_1 296 FNGLTTMADGTKREEIdIEILTEIMGSAEHAREIMAKVDADGGGTIDFEEFKAMI 350
                 5566555554444444145667777777788889899999999********7554 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   9.6e-06     0.011     133     166 ..      21      54 ..       3      65 .. 0.87
   2 ?   -1.6   0.0      0.91     1e+03      37      76 ..     171     209 ..     163     211 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 9.6e-06
   PF06293.9 133 kmhragvnHtdlnahnilldeeeekakvwliDld 166
                   h+ ++ H+dl + n+l++++ ++ ++ +iD+ 
  MMETSP1325-20131115|4296_1  21 YCHNLNIIHRDLKPENFLFRDKSDESDLVIIDFG 54 
                 5799****************************96 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.91
   PF06293.9  37 rggllgklvrdlyrfklgetrs.vrEfrllkrLreagvpvp 76 
                 +  ++g l++d++++  g  ++ ++ f+ +++L++  ++v+
  MMETSP1325-20131115|4296_1 171 LAHQAGTLSKDALQM--GDMKArFEKFMGMNKLKKMALKVM 209
                 567889999995554..444441455999999999999998 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0     1e-05     0.011     126     165 ..      14      52 ..       3      62 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1e-05
   PF10707.4 126 aLeefleallenrIvardlkpknivvgrrsegeeelvlvD 165
                 ++ + l+++ +++I+ rdlkp+n++++++s+++ +lv++D
  MMETSP1325-20131115|4296_1  14 SILDALDYCHNLNIIHRDLKPENFLFRDKSDES-DLVIID 52 
                 5667899*********************99999.*****9 PP

>> PF01633.15  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1     6e-05     0.069     142     169 ..      22      53 ..       5      61 .. 0.77
   2 ?   -3.0   0.0       3.4   3.9e+03      45      63 ..     189     207 ..     183     221 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6e-05
                 -..EEEE-S------EEE..-------EE--- CS
  PF01633.15 142 p..vvfCHnDlqegNill..nkeekklvlIDF 169
                    +++ H Dl ++N+l+  +++e++lv+IDF
  MMETSP1325-20131115|4296_1  22 ChnLNIIHRDLKPENFLFrdKSDESDLVIIDF 53 
                 334788899*********8788899******* PP

  == domain 2    score: -3.0 bits;  conditional E-value: 3.4
                 ---EE----EEE--TTGGG CS
  PF01633.15  45 ngrieefiesrtlstedlr 63 
                 + r+e+f++ ++l++  l+
  MMETSP1325-20131115|4296_1 189 KARFEKFMGMNKLKKMALK 207
                 5688888888888876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.77u 0.38s 00:00:01.14 Elapsed: 00:00:00.56
# Mc/sec: 1816.19
//
Query:       MMETSP1325-20131115|4298_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.044   13.7   0.3        0.2   11.6   0.0    2.1  2  PF04837.7 MbeB-like, N-term conserved region
      0.068   12.6   0.8       0.13   11.7   0.6    1.4  1  PF11037.3 Insulin-resistance promoting peptide in skeletal muscle
      0.089   12.4   1.2       0.77    9.4   0.8    2.1  1  PF14223.1 gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> PF04837.7  MbeB-like, N-term conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.4e-05       0.2      14      33 ..      63      82 ..      61      86 .. 0.87
   2 ?   -1.0   0.0      0.37   1.7e+03      12      20 ..     116     124 ..     109     130 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.4e-05
   PF04837.7 14 kskeqaeSteemvksafekh 33
                ++ e+a Steemv++ ++ +
  MMETSP1325-20131115|4298_1 63 TLMEEANSTEEMVRAKIQAL 82
                7789***********99876 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.37
   PF04837.7  12 eqkskeqae 20 
                 e+ +k+ ae
  MMETSP1325-20131115|4298_1 116 EKALKKMAE 124
                 444455555 PP

>> PF11037.3  Insulin-resistance promoting peptide in skeletal muscle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.6   2.9e-05      0.13      37     116 ..      53     127 ..      38     134 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.9e-05
   PF11037.3  37 sealdleapptaseeksate..laaklllldelvslendvietkkkrsfsGfGspldrlsagsvdakGkqrkvvdlpkkrfG 116
                  +++ ++a  t  ee  +te  + ak+  ld+ +   ++v +tkk  s+s        l   +v++k k  k++++    fG
  MMETSP1325-20131115|4298_1  53 DKVAFIKAWETLMEEANSTEemVRAKIQALDDTMFSHDHVKQTKKVTSLST-------LHGMAVEHKPKVEKALKKMAESFG 127
                 566677888898888777764467*********************999875.......455667777777777777776666 PP

>> PF14223.1  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.8   0.00017      0.77       5      81 ..      59     126 ..      57     129 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00017
   PF14223.1   5 eiWdaLkkeyegsdrvkearlqtLrkefenlkmkegesvdeyldrlkeivnklrslGekisdekvveklLrslpeky 81 
                 ++W++L +e + ++++ +a++q+L            +  +++++++k++++    +G  ++ + +vek L+ + e++
  MMETSP1325-20131115|4298_1  59 KAWETLMEEANSTEEMVRAKIQALDDT---------MFSHDHVKQTKKVTSLSTLHGMAVEHKPKVEKALKKMAESF 126
                 589999998888888666666666554.........44567999999999999999999999999999999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       698  (0.0510532); expected 273.4 (0.02)
Passed bias filter:                      554  (0.0405208); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.61
# Mc/sec: 538.20
//
Query:       MMETSP1325-20131115|4297_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.23   11.1   5.2        6.1    6.4   3.6    2.1  1  PF02104.10 SURF1 family


Domain annotation for each model (and alignments):
>> PF02104.10  SURF1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   3.6   0.00045       6.1      57     124 ..      58     140 ..      27     264 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.00045
  PF02104.10  57 rvtltGrfdpeqevllgnrtregqaGylvvtplrltdgeviLVnrGwvprekrdrsrlpe.qtparka..............g 124
                 rv +  +++++++v+l+  +  g++G  v tpl + + ++ LV++G  +r    +++ +  +  ++++               
  MMETSP1325-20131115|4297_1  58 RVPVYAEMREKDSVVLRLERAMGDVGLDVSTPLPPGELKAALVKLGLKSRTAGVKDAMRSlEGSNAASaevaevelriwmtrC 140
                 7888899999*******888889*************99**********99999998888865555444555433333333330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1302  (0.0952311); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.51
# Mc/sec: 1367.33
//
Query:       MMETSP1325-20131115|4300_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 352.67
//
Query:       MMETSP1325-20131115|4299_1  [L=425]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.49
# Mc/sec: 2078.47
//
Query:       MMETSP1325-20131115|4303_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.62
# Mc/sec: 900.57
//
Query:       MMETSP1325-20131115|4305_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|4306_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-28   99.8   0.0    1.7e-28   99.3   0.0    1.2  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
    4.6e-14   52.4   0.0    6.5e-14   51.9   0.0    1.1  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
        0.1   12.1   2.1       0.19   11.3   1.4    1.4  1  PF08646.5  Replication factor-A C terminal domain
       0.12   11.2   0.0       0.18   10.7   0.0    1.2  1  PF08715.5  Papain like viral protease


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.3   0.0     5e-32   1.7e-28     145     272 .]      40     179 ..      23     179 .. 0.91

  Alignments for each domain:
  == domain 1    score: 99.3 bits;  conditional E-value: 5e-32
                 EEEEEETTCEEE.....EEEECCB-SEEEEEEE-E........EEETTTTEEEE-----B--SEEE-GGGBSCHHH--BTTSSCEEEEEEEEEE---TT---EEEEEE..SS-TT-EEEEETTEEEEE-HHHHTTC..EEEEEEE CS
                 xxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxx RF
  PF00443.24 145 ksrlkclecknv.....kvklkrlPeiLiihlkRf........kyseerssnkKlnekvefpleLdlssyvneekkeeseskpkkYeLvavvvHsGslssGHYvayvk..nneknkWlkfdDetvtevkeeevlke..saYvlfY 272
                 +++ kc++c+++     k++++++P+iL+i++kRf           ++   ++K++e v+fp   d+  +++      +++ + +Y+L++vv+H+G lssGHY+a +   ++ k++W++++D +v++++e evl    +aY+lf+
  MMETSP1325-20131115|4306_1  40 TETWKCEHCNKQcrafkKISVWSTPDILCINFKRFsttigkskVKGRSVARRRKIDEAVDFPMSFDMGGMIKG-----GQDASSTYDLFGVVYHMGDLSSGHYTARAVdrSSGKSQWFNYNDASVSACDEREVLARskHAYMLFF 179
                 6789*******************************99998876555666778*******************96.....599***********************96655699*********************98888******6 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0   1.9e-17   6.5e-14     162     295 .]      21     159 ..       3     159 .. 0.83

  Alignments for each domain:
  == domain 1    score: 51.9 bits;  conditional E-value: 1.9e-17
   PF13423.1 162 giklenileeslnseknke...ikcesckkkssaevakkftslPpiLgIclkrynek.........efg.akrlntkvdiplelrlphfiqddeqenekplsgefkyeLqavVchigdsltsghlvSlirvaeseksqWylFnDfrv 295
                 + +l ++l ++ ++e+  +   +kce+c+k+  a  ++++ s P+iL I+ kr + +         ++   ++ ++ vd+p +++++  i+       ++++ +  y L +vV h+gd l+sgh+ + +  ++s ksqW  +nD +v
  MMETSP1325-20131115|4306_1  21 RADLMSCLSKYTEQEQLGStetWKCEHCNKQCRAFKKISVWSTPDILCINFKRFSTTigkskvkgrSVArRRKIDEAVDFPMSFDMGGMIK-------GGQDASSTYDLFGVVYHMGD-LSSGHYTARAVDRSSGKSQWFNYNDASV 159
                 678899*****99999877788*********************************998854333321112344555999999999999994.......4567899*************.*******9998888999********876 PP

>> PF08646.5  Replication factor-A C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.4   5.5e-05      0.19      24      52 ..      25      57 ..      21      63 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 5.5e-05
                TT---B-EE---....--EEETTTTEEESS--E CS
   PF08646.5 24 ekCnkKvveeed....gewrCekCdkeveepky 52
                ++C  K +e+e+    ++w+Ce+C+k++  +k+
  MMETSP1325-20131115|4306_1 25 MSCLSKYTEQEQlgstETWKCEHCNKQCRAFKK 57
                57999*****87766667*********988765 PP

>> PF08715.5  Papain like viral protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   5.3e-05      0.18     168     284 ..      23     145 ..      13     166 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5.3e-05
   PF08715.5 168 etltkLseyldldsakallkksvckeCgvkkselagve..aaivvasvkkdglkvgysic.....cvcgakatsrvvevegrvvllsatdgpaaesklesgvalvafsGsvdsGHYtydaakka 284
                 ++++ Ls+y ++++    +    c++C+ +   ++++   +   +  ++   + + + ++      v ++ + ++ v+   ++ +    +g    s   +  ++v ++G + sGHYt  a++++
  MMETSP1325-20131115|4306_1  23 DLMSCLSKYTEQEQLGSTET-WKCEHCNKQCRAFKKISvwSTPDILCINFKRFSTTIGKSkvkgrSVARRRKIDEAVDFPMSFDMGGMIKGGQDASSTYDLFGVVYHMGDLSSGHYTARAVDRS 145
                 78999********9999998.89****988888877651144335555555555555555001114444455555555555555544444444444444445566689*********8888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       583  (0.0426419); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.60
# Mc/sec: 1062.38
//
Query:       MMETSP1325-20131115|4301_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-10   38.9   1.1    5.1e-10   38.4   0.0    1.7  2  PF00709.16 Adenylosuccinate synthetase


Domain annotation for each model (and alignments):
>> PF00709.16  Adenylosuccinate synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   3.7e-14   5.1e-10     334     421 .]       3     116 ..       1     116 [. 0.84
   2 ?   -2.1   0.9     0.074     1e+03     219     244 ..     125     151 ..     124     154 .. 0.84

  Alignments for each domain:
  == domain 1    score: 38.4 bits;  conditional E-value: 3.7e-14
  PF00709.16 334 deldeikvctaYel...egk...............eie.evpaeeeelekvepvyeelpgw.kediskvke.......fedlpenakeyvkaieellgvpiklisvGpdreqiii 421
                 d++de  +c+aY +   +gk               ++  ++p+ ++ +++++p+++++ gw +++i + ++         +lp  ++e +++ie+++g+++ +i++Gp+ ++ii+
  MMETSP1325-20131115|4301_1   3 DDYDEYGLCIAYIYhhpQGKtmysngrefksgtiiKCGeQLPT-QPIMAHCQPIIKKVSGWrDTPIFARSKewqardvGGELPGPVCEIIDTIEHFTGTKVLSIGNGPRGDDIIY 116
                 889***********8787779***********97644434554.59***************77777655545544445669********************************96 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.074
  PF00709.16 219 Egaqgvll.didhgtypyvTssnttag 244
                 E aqg +l  i  g  +++T ++tt++
  MMETSP1325-20131115|4301_1 125 EVAQGKVLsKITQGSGESTTTTTTTTS 151
                 789999997899999999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 700.82
//
Query:       MMETSP1325-20131115|4304_1  [L=459]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-67  226.8   0.0    2.9e-67  226.4   0.0    1.1  1  PF01370.16 NAD dependent epimerase/dehydratase family
      2e-07   30.0   0.0    3.4e-07   29.3   0.0    1.3  1  PF04321.12 RmlD substrate binding domain
    2.6e-05   23.1   0.0    3.9e-05   22.5   0.0    1.2  1  PF02719.10 Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.042   13.7   0.0      0.097   12.5   0.0    1.6  1  PF13460.1  NADH(P)-binding
      0.043   12.9   0.0      0.072   12.2   0.0    1.3  1  PF05368.8  NmrA-like family


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.4   0.0   1.1e-70   2.9e-67       1     235 [.      37     283 ..      37     284 .. 0.97

  Alignments for each domain:
  == domain 1    score: 226.4 bits;  conditional E-value: 1.1e-70
                 EEEE--------HHHHHHHHH-TEEEEESSCSTCCCCCCHHH............TBEEEB--TT-HHHHHHHHHHHT.SEEEE--S---HHHCCCSHHHHHHHHT---HHHHHHHHHHTT....EEEEEEEGGG---BSSSCB-TTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEE-TT...-SHHCHHHHHHHHHH---S.EEEE--TT-EEEEEEHHHHHHHHHHHHHSSS.--EEEEE CS
  PF01370.16   1 ilVtGatGfiGsalveallekgyevvnlirrtrseslatvri............rvelveldltdkdalerlfaeeqpdaVihlAaesgvdassedpadfieanvegtlnlleaarkagv...krflfasSsevygkdaeqpikEetplgplspYaaaKlageklveayaeeyglnaiilrlfnvyGprnfdeevshvipalirkilegee.vtllgdGtqlRdflyveDvaealllvlehgdvageiyni 235
                 +l+tG+tG++Gs+l+e ll+kgye  ++++ +rs+s++t ri            ++ l+++dltd+++l +++a+ +pd++++l+a+s+v+ s+e  ++++ea+ +gtl+ll+a+r +g+    r+++as+se+ygk++e p +E+tp++p+spY++aK+++++++ +y+e+yg++ ++++lfn+++pr++ ++v+++i++++ +i +g + v+ lg+ +++Rd+++++D+++++++++++++  ++++++
  MMETSP1325-20131115|4304_1  37 ALITGITGQDGSYLAEFLLDKGYE--VHGIIRRSSSFNTYRIeniykdrhdedvKLFLHYGDLTDSTNLVQIVADCRPDEIYNLGAMSHVKVSFEMSEYTAEADGVGTLRLLNAIRSCGMektCRLYQASTSELYGKVREIPQTETTPFYPRSPYGVAKQYAYWMIVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVCRISKGLQdVLFLGNIDSQRDWGHARDYVKGMWMMVQRDE--PDDFVL 283
                 59**********************..7777777778888888889*******9999****************************************************************999***************99999********************************************************************9*******************************..998876 PP

>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   1.2e-10   3.4e-07       4     130 ..      38     194 ..      35     207 .. 0.93

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 1.2e-10
                 EEE--------HHHHHH----EEEEE--TT..........................T--TT-HHHHHHHHHHH--SEEEE------HHHHHH-HHHHHHHHT---HHHHHHHHH---....EEEEEEEGGG-----SS-B-TTS-----S----TTT CS
  PF04321.12   4 lvtGanGqlGteLaralkeegvevvaldre..........................eldltdpeavaalvkeakpdvvvnaAAytavdkaEseeeeayavnaegpenlAeaaaavga....llihiSTdyVFdGekkrpYeeddetaPlnvYGrtKl 130
                 l+tG +Gq G+ La+ l ++g+ev+ + r+                            dltd++++ ++v++ +pd ++n++A   v    + +e ++++   g+ +l +a +++g+    +l + ST   +   ++ p +e+ +  P++ YG +K 
  MMETSP1325-20131115|4304_1  38 LITGITGQDGSYLAEFLLDKGYEVHGIIRRsssfntyrieniykdrhdedvklflhYGDLTDSTNLVQIVADCRPDEIYNLGAMSHVKVSFEMSEYTAEADGVGTLRLLNAIRSCGMektcRLYQASTSELYGKVREIPQTETTPFYPRSPYGVAKQ 194
                 8**************************66669***********************99*********************************999******************9999963333699********999******************9996 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   1.4e-08   3.9e-05       2     123 ..      38     157 ..      37     165 .. 0.85

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 1.4e-08
  PF02719.10   2 lvtGagGsiGselvrqilkkkpkki.illerdElklyeiekeleeelkkeklkveivpvigdvrdkerleealeelkvdvvfhaAAlKhVPlveenpleavktNvlgtenvieaaieagvekv 123
                 l+tG +G  Gs l + +l+k  +   i+  ++ ++ y+ie+  +++++ e++k++     gd++d+++l +++ + ++d +++  A+ hV +  e    + +   +gt  +++a  ++g+ek 
  MMETSP1325-20131115|4304_1  38 LITGITGQDGSYLAEFLLDKGYEVHgIIRRSSSFNTYRIENIYKDRHD-EDVKLF--LHYGDLTDSTNLVQIVADCRPDEIYNLGAMSHVKVSFEMSEYTAEADGVGTLRLLNAIRSCGMEKT 157
                 8******************966544155666789******99755554.466555..789******************************99888888888999999*999999999998875 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.6e-05     0.097       2      50 ..      38      85 ..      37     111 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.6e-05
   PF13460.1  2 aviGAtGktGrrivkellarghevtalvRnpsklpessgvtivkkDlfd 50
                +++G tG+ G+ +++ ll++g+ev  ++R+ s+ +   +++ + kD +d
  MMETSP1325-20131115|4304_1 38 LITGITGQDGSYLAEFLLDKGYEVHGIIRRSSSFNT-YRIENIYKDRHD 85
                79999*************************997763.455555555555 PP

>> PF05368.8  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.7e-05     0.072       2      62 ..      38     107 ..      37     112 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 2.7e-05
                 EESS----HHHHHHHHHHH---EEEEE-S--.......---HHHHHHHSTTEEE..---TT-HHHHHHHH CS
   PF05368.8   2 lviGaTGrqGksvvraslkaghkvralvRdl.......kselakslkaaGvelv..egdlddkeslveal 62 
                 l++G TG+ G+++++++l++g++v  ++R +        +++ k   ++ v+l    gdl d + lv+++
  MMETSP1325-20131115|4304_1  38 LITGITGQDGSYLAEFLLDKGYEVHGIIRRSssfntyrIENIYKDRHDEDVKLFlhYGDLTDSTNLVQIV 107
                 799*************************999777766655566666666666655567777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.34s 00:00:01.09 Elapsed: 00:00:00.55
# Mc/sec: 1999.87
//
Query:       MMETSP1325-20131115|4307_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0055   15.9   0.3     0.0069   15.5   0.2    1.2  1  PF05285.7 SDA1


Domain annotation for each model (and alignments):
>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   5.1e-07    0.0069     142     218 ..      96     195 ..      29     222 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 5.1e-07
   PF05285.7 142 eeeeeesekkkkeesdeekseeeeeeaaeeeeee.......................akeekiselassriLTdaDfakleelrtekevekalkgkkker 218
                  +++ +++kk k   d ek++ +e++ a  +e                         a   + + +  + iL++aDf+kl + r +k+ +++ k+ ++++
  MMETSP1325-20131115|4307_1  96 PSSSTKKKKKTKPLYDWEKQDGDEDKGAGVMERMpietsygmfvpshniagfyeqqqALPVSQQYVDFQVILSEADFQKLAARRRAKKKSESAKQPSQDS 195
                 4455556666666667777777666666665555888999999999999999876333333445566779***************999999999877444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       531  (0.0388385); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1419.02
//
Query:       MMETSP1325-20131115|4308_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-09   35.2   3.9    8.5e-09   34.8   2.7    1.1  1  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   2.7   6.2e-13   8.5e-09     102     199 .]       3     113 ..       1     113 [. 0.94

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 6.2e-13
                 XXXXXXXXX-----S-SSSS-----TTT.......-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX...........XXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  PF00520.26 102 lllfvlfifaiigvqlfggklrkkcvke.......kagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatl......ragskigyiyfvifiilgsflllnlliavi 199
                 + l+v++i+ +ig ++ +g+l +k v +       + + n  ++   ++t+g ++l+l++++   +w+d+++a +         +++  +yf++f++l++++  n+l+a+i
  MMETSP1325-20131115|4308_1   3 ISLIVFYIYTCIGISILHGDLPDKFVYDaddaasaSDDANIGQSVVVMNTYGDCYLALLQIAVDNNWQDILWAHIisanlgLRDGFFVSLYFCSFFVLVGWFTHNILVALI 113
                 6799*****************9998888*****9999999999999***********************************888999999999****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|4309_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-15   54.2  10.2    6.9e-12   44.1   2.4    2.2  2  PF00132.19 Bacterial transferase hexapeptide (six repeats)


Domain annotation for each model (and alignments):
>> PF00132.19  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.4   1.6e-06     0.022       1      23 [.       3      25 ..       2      26 .. 0.78
   2 !   44.1   2.4   5.1e-16   6.9e-12       1      35 [.      37      71 ..      37      71 .. 0.97

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.6e-06
                CEEE-TTEEE-TTEEEESSEBE- CS
  PF00132.19  1 gtvIGenvlIgpnvvigggviIG 23
                g+vIGe ++Ig  ++ ++gv++G
  MMETSP1325-20131115|4309_1  3 GVVIGETAVIGERTTMLHGVTLG 25
                57888888888888888888877 PP

  == domain 2    score: 44.1 bits;  conditional E-value: 5.1e-16
                CEEE-TTEEE-TTEEEESSEBE-TTEEE-TTEEEE CS
  PF00132.19  1 gtvIGenvlIgpnvvigggviIGdnviIgagvvig 35
                +++IG++++Ig++++i+g++ IGd+++Iga++vi+
  MMETSP1325-20131115|4309_1 37 HPTIGDDCVIGAGSTILGDIMIGDRCVIGAQAVIT 71
                689******************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 620.23
//
Query:       MMETSP1325-20131115|4311_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   10.4   4.9       0.26   10.0   3.4    1.2  1  PF10882.3 Protein of unknown function (DUF2679)


Domain annotation for each model (and alignments):
>> PF10882.3  Protein of unknown function (DUF2679)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.4   1.9e-05      0.26      12      51 ..      67     107 ..      61     110 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 1.9e-05
   PF10882.3  12 lladallillillvdsylvlellkvsl.iilniyqlyyill 51 
                 l + + ++ l++lv  yl ++l+ ++l ++l++y lyyi +
  MMETSP1325-20131115|4311_1  67 LSMKQNVLYLQQLVALYLDMYLVPIVLlVLLALYVLYYIAK 107
                 67788999***************87651678*******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       507  (0.0370831); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.31s 00:00:00.69 Elapsed: 00:00:00.60
# Mc/sec: 451.31
//
Query:       MMETSP1325-20131115|4312_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0002   20.9   2.0      0.018   14.7   0.4    2.2  2  PF00514.18 Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0   0.00086        12      25      40 ..       5      20 ..       3      21 .. 0.85
   2 !   14.7   0.4   1.3e-06     0.018       7      40 ..      29      64 ..      23      65 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.00086
                SHHHHHHHHHHHHHHH CS
  PF00514.18 25 deevqeeAawALsNLa 40
                d +v +++++A++NL+
  MMETSP1325-20131115|4312_1  5 DVSVMKASLCAIRNLS 20
                6777799********8 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 1.3e-06
                HHHHCHHHHHHHHHHC..-SSHHHHHHHHHHHHHHH CS
  PF00514.18  7 avieaGavppLvqLLk..sgdeevqeeAawALsNLa 40
                ++ + G+ ++ v+ L+   +  e++++A+wA++NLa
  MMETSP1325-20131115|4312_1 29 TLYKLGISEQVVNALQlhPTEAELVTAALWAMCNLA 64
                5667888888999999999****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 298.62
//
Query:       MMETSP1325-20131115|4310_1  [L=545]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-88  297.0   0.0    1.6e-88  296.7   0.0    1.1  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.7   0.0   1.1e-92   1.6e-88       2     418 .]      58     474 ..      57     474 .. 0.89

  Alignments for each domain:
  == domain 1    score: 296.7 bits;  conditional E-value: 1.1e-92
                 HHHHHHHHHHHHHHHHH----...TT-EEEEE-SSSHHHHHHHHHHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHHHHHHHHHHHCTTCTTECCS-EECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTSEEEEES-.TTCCHHCTTTHHHHTTT-EEEEESSCCTT-HHHHHHHHHHC.T-SEEE--HHHHHHHHHHCHC........CCTTTTT--EEEE-----THHHHHHHHHHTT.SEEEEEE--CGGSSESEECCS-HHH.CCH---EBSTTTEEEEEBSTT.-BEE-S----EEEESTTS--B-TT-HHHHHHHBCCSTTEEE---EEEE-TT...--EEEE--GG.GEEE----EEEHHHHHHHHHTSTTEEEEEE CS
  PF00501.23   2 YreldervnrlaagLrklGvk...pgdrVaillpnspewviaflaclkaGavyvplyptlpaerlayilndseakvlitddelltklleaaskelakekliivrtdkeedsvgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpddrvlsllp.lhfdgsilellaplllGatvvlvspedlkdpalllddieky.kvtvlalvptvlelllkaiek........kkldlsslrlilsggeplspellerlreafggirivngYGltEttgvvtvslpgdeetkpgsiGrplpgvevkivdeeg.kevppgevGEllirgpgvakGYlkdpeltaeafdedgwlyrTGDlgrlded...GyleiiGRkk.dqikirGeniepgeiEsallehpgvaeaaV 418
                 Y +l +++ + a  Lr+ + +   +g rV il+p+s+++ +++l++++aG+v+vp+   +p ++l+y  ++se+++++++ e+++++++ ++   ++  +             ++ ++ ++e++ ++  +  + + d    a+i+yTSGtTG+PKGV++th ++ + +  ++ +++ t++d+ l++lp +h +g +  l++pl +Gatv +++ +  k  a++l   +++  +t++++vptv+ +l ++ +k        +++  + lrl++sg ++l+ +++ r++e  g  ++++ YG+tE +++ +  l+g+     g++G plp v +++vde++   v++ge+GEl ++gpg+++ Y+++pe+t++ fdedgw ++TGD++ +  d     ++i+GR+  d+ik++G+ i+  ++E  +lehp +ae+aV
  MMETSP1325-20131115|4310_1  58 YDQLLREASATADRLRQWNGGddlEGKRVSILCPPSADFAVSLLGTWMAGGVVVPMHYKHPSDELQYYADQSESSLVLAHPEFHDTAKALNKLVMTSNNK-------------DDGVDVNAELDVDRLLALDATS-DVARRALILYTSGTTGRPKGVVHTHNGINHAADDLITAWEWTANDKLLHFLPlHHMHGILNKLICPLRVGATVEFTEASAAKIWARMLASSDALpAPTTFMAVPTVYAKLNEHYDKmdpadqaaASKACKELRLFVSGSAALPSSVMTRFKEISG-HTLLERYGMTEVCMALSNPLHGER--LEGHVGLPLPSVNARVVDEATgAVVADGETGELRLKGPGIFSEYFNNPEATEKEFDEDGW-FKTGDIVQRSIDeegAPYKICGRASvDIIKSGGYKISALDVEREILEHPSIAEVAV 474
                 888888888888888844443222799**************************************************************99988766332.............2233333333333333333333.44678***********************************************666666778899****************6666666666666647********************************************************997.************************..9***********************************************************.*******988776655699***********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.82u 0.34s 00:00:01.15 Elapsed: 00:00:00.57
# Mc/sec: 2251.75
//
Query:       MMETSP1325-20131115|4313_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.55
# Mc/sec: 588.20
//
Query:       MMETSP1325-20131115|4314_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-13   49.2   0.0    4.5e-13   48.6   0.0    1.3  1  PF00173.23 Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.19   11.1   0.0    1.3  1  PF07883.6  Cupin domain


Domain annotation for each model (and alignments):
>> PF00173.23  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   6.6e-17   4.5e-13       1      75 [.     100     199 ..     100     200 .. 0.85

  Alignments for each domain:
  == domain 1    score: 48.6 bits;  conditional E-value: 6.6e-17
                 EBEHHHHHTCE....CTTEEEEECTTEEEETTTTTTTHTSTTHHHHTT---BHHHHH......................HHHHHHHHHHHHHHGCGBE--B CS
  PF00173.23   1 vftleevskhn....kekdswvvirgkVYDvskflkdhpggasailafaGkDaTeaf......................enashseaaekllekyyrvGrl 75 
                 v+t ee+++ +    ++ + w+++rg+VYDvsk  +++ +g + ++af GkDaT+af                      ++a++ +++ +   ky +vG+l
  MMETSP1325-20131115|4314_1 100 VVTHEELAQMDgltdPNAPLWLAVRGRVYDVSKGTSFYAPG-KNYHAFVGKDATRAFctgclepaclisstlglsdaqvKEADRWAEYYEHHDKYTFVGKL 199
                 5799**********9******************99999999.9*****************************99888654444444444444447888876 PP

>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.8e-05      0.19      33      58 ..     122     147 ..     119     157 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.8e-05
                 EE-TEEEEE-TT-EEEE-TT-EBEEB CS
   PF07883.6  33 tvdgeeveleaGdsvyfpagtpHrfr 58 
                  v g+++++++G s+y p +  H+f+
  MMETSP1325-20131115|4314_1 122 AVRGRVYDVSKGTSFYAPGKNYHAFV 147
                 589*********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       466  (0.0340843); expected 273.4 (0.02)
Passed bias filter:                      415  (0.030354); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 1193.48
//
Query:       MMETSP1325-20131115|4320_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-08   34.7   0.0    5.6e-08   32.6   0.0    2.0  2  PF00651.26 BTB/POZ domain
  ------ inclusion threshold ------
       0.08   12.3  11.1       0.12   11.6   7.7    1.2  1  PF08474.6  Myelin transcription factor 1
        1.9    6.3  16.8        2.5    5.9  11.7    1.0  1  PF07218.6  Rhoptry-associated protein 1 (RAP-1)
        3.9    7.3  15.4        5.7    6.8  10.7    1.3  1  PF06112.6  Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0   1.6e-11   5.6e-08      61     109 ..       3      51 ..       1      53 [. 0.91
   2 ?   -1.1   0.0      0.49   1.7e+03      87     106 ..     107     126 ..      95     130 .. 0.81

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 1.6e-11
                 HHHHHHHHHHHCCSEEEC.ECCHHHHHHHHHHHHT-HHHHCHHHHHHHH CS
  PF00651.26  61 pevfealLefiYtgeleitseenveelLaaadllqiprlkdaceeflke 109
                 + vf++lL+f+Yt+el+ +   +++ lL aad++q++rl+  ce++l +
  MMETSP1325-20131115|4320_1   3 APVFKELLRFLYTDELTSEGALMADRLLVAADKYQLERLRWLCETSLVN 51 
                 679***************9888899999999*************99975 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.49
                 HHHHHHHHT-HHHHCHHHHH CS
  PF00651.26  87 lLaaadllqiprlkdaceef 106
                  L aa +l +++ +dac+++
  MMETSP1325-20131115|4320_1 107 QLFAAAKLGVKHGRDACKSI 126
                 578899999**999999875 PP

>> PF08474.6  Myelin transcription factor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   7.7   3.6e-05      0.12      52     107 ..     162     217 ..     153     227 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 3.6e-05
   PF08474.6  52 pkayqdakpfpkdssPessssssyvksssssssagasasstvrkssfdysqdaeaa 107
                  k++ d+k+ p + +P+ssssss   ssssss++gas++ ++ +ss   + + e+a
  MMETSP1325-20131115|4320_1 162 GKGHGDSKKRPPADAPSSSSSSSSSSSSSSSSASGASSEEAAASSSSSSGGNXEEA 217
                 68999*******************99999999999999988888877777666665 PP

>> PF07218.6  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  11.7   0.00072       2.5     102     201 ..     132     223 ..     116     228 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00072
   PF07218.6 102 vrsasaaaileeddskddlefkasqsvvktskpkststeslksssdskskasaksnvksaskyGesssseesatdsskasasvagivGadeeeppapknt 201
                 + sa a+++   +ds +d    + ++v + +k +++s +   + ++s+s++s+ s++ s+s   + +ssee+a  ss++s       G  ee+ pa kn+
  MMETSP1325-20131115|4320_1 132 IPSARAVCVSLTNDSGEDSGGCSVDAVGRGGKGHGDSKKRPPADAPSSSSSSSSSSSSSSSSASG-ASSEEAAASSSSSSG------GNXEEA-PAGKNA 223
                 668888889999999999999999999999*9999999998888888888777776666555444.446666665555554......666666.777775 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  10.7    0.0017       5.7     107     135 ..     166     208 ..     108     224 .. 0.49

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0017
   PF06112.6 107 a..............lSsssvsalsSgpsslsssssesssdas 135
                 +               Ssss s+ sS+++s++ss+++++s +s
  MMETSP1325-20131115|4320_1 166 GdskkrppadapsssSSSSSSSSSSSSSASGASSEEAAASSSS 208
                 0334444433322112222222222222222222111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.39s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 1158.24
//
Query:       MMETSP1325-20131115|4318_1  [L=715]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-05   22.4   0.0    5.8e-05   21.7   0.0    1.2  1  PF00201.13 UDP-glucoronosyl and UDP-glucosyl transferase
      9e-05   22.0   0.0    0.00016   21.2   0.0    1.3  1  PF04101.11 Glycosyltransferase family 28 C-terminal domain


Domain annotation for each model (and alignments):
>> PF00201.13  UDP-glucoronosyl and UDP-glucosyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   8.5e-09   5.8e-05     340     421 ..     217     299 ..     212     308 .. 0.90

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 8.5e-09
  PF00201.13 340 pktkAFvtHaGangvyEaissGvPmvglPlFgdQtdNakrm.eakgaavtlnvkemtsedllnAlkevindksYkenimrLss 421
                 p+ +A v H+Ga ++  ++  G P v+ P+  dQ+     +  +k + +t   +e+t e+l +A+ +v  d+  + n+  +ss
  MMETSP1325-20131115|4318_1 217 PRCGAVVHHGGAGTLAAGLKAGCPTVICPFIFDQQYFGGLVtDNKLGLMTSPARELTVEELSEAITTVTTDDEMRANASSISS 299
                 8899*************************9888877666551679999************************9****999887 PP

>> PF04101.11  Glycosyltransferase family 28 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   2.3e-08   0.00016      76     154 ..     222     297 ..     219     309 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 2.3e-08
                 EEEE-----HHHHHHTT--EEEE--TT....S-HHHHHHHHHHHHH---EEEE-S--------THHHCS---S---SSC CS
  PF04101.11  76 vIsrAGagtiaellalgkplIlvPlpeaaenhqdnnakelakagagrvllqkeltpekLeeallelaaekkrlaekska 154
                 v+ ++Gagt+a  l++g+p++++P+ +   ++q+   +   ++++ +    +elt e+L ea++ + ++++  a+ s+ 
  MMETSP1325-20131115|4318_1 222 VVHHGGAGTLAAGLKAGCPTVICPFIF---DQQYFGGLVTDNKLGLMTSPARELTVEELSEAITTVTTDDEMRANASSI 297
                 788************************...4555555555556777777899999**********99998876665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (715 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.06u 0.38s 00:00:01.44 Elapsed: 00:00:00.69
# Mc/sec: 2483.18
//
Query:       MMETSP1325-20131115|4319_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-38  131.6   0.1    3.5e-38  131.2   0.0    1.2  1  PF11264.3 Thylakoid formation protein


Domain annotation for each model (and alignments):
>> PF11264.3  Thylakoid formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.2   0.0   2.6e-42   3.5e-38       8     214 ..       3     200 ..       2     233 .. 0.95

  Alignments for each domain:
  == domain 1    score: 131.2 bits;  conditional E-value: 2.6e-42
   PF11264.3   8 aFyaayprvipslYrrvvdelLVelhLlsvqkefkydplfalGlvtvfdslmegYkpeeekealfealcsaleedpeqlrkdaekleeaaksksleeikellsekeaeaeealkkslqaiaseekfkySrllavGllklleeakeekekdeeklkkalkelseslglskekvekDlelYksnlekleqakelleetleaerrkrekr 214
                  F ++y  +i + Yr ++ +lL   hL +v+ +f ydp+falG+ ++f ++ ++Y p ++  ++ +a+++al+ d++q ++da+++ e+a++k++  +++l +e    +++a+ + ++ai+++++f y r++ vGl+kl+++a       e+ +++ l++ +++lg+s++k ++D +lY+ +l+kl++  +l +e+  +e++k + r
  MMETSP1325-20131115|4319_1   3 DFTSNYNTPIVPAYRSIIMDLLTTTHLARVDDRFVYDPIFALGMEQIFAEFFKAY-PGTDAGKIETAMVQALDLDSAQAKADAKAVVEWASGKDAAGLEALFDEP---DSSAVGSAVAAIKANKDFLYNRVFGVGLFKLFADAGI-----ETIDNELLTKYATKLGYSATKFQQDYDLYSESLSKLRSVEQLFKEIEIREKKKLAAR 200
                 6999***************************************************.****************************************999999664...666799*****************************88.....6778999**************************************988999986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       940  (0.0687537); expected 273.4 (0.02)
Passed bias filter:                      525  (0.0383996); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.41s 00:00:00.96 Elapsed: 00:00:00.69
# Mc/sec: 850.88
//
Query:       MMETSP1325-20131115|4322_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 935.05
//
Query:       MMETSP1325-20131115|4323_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 565.95
//
Query:       MMETSP1325-20131115|4315_1  [L=400]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-13   48.0  30.7    1.6e-12   47.2  21.2    1.3  1  PF00487.19 Fatty acid desaturase
  ------ inclusion threshold ------
       0.14   11.7   1.9        1.6    8.3   0.1    2.7  2  PF05545.6  Cbb3-type cytochrome oxidase component FixQ
       0.15   11.3   5.2       0.39    9.9   3.2    1.9  2  PF01925.14 Sulfite exporter TauE/SafE


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2  21.2   3.6e-16   1.6e-12       2     228 ..      63     270 ..      62     278 .. 0.86

  Alignments for each domain:
  == domain 1    score: 47.2 bits;  conditional E-value: 3.6e-16
  PF00487.19   2 gwlllllalllaalllsilvnlaHealHgalfrsrrlnrvlglllalllgisslawrrsHlrhHhytgnaekDpdsalrrlirlaerrpllklrrllyrlllglllggllfllalerrklrkrrrrkg.......lalllallilalllalaglllllsglgalllyvvplalaltvlllvn.yle.HygletednnaardfyenqlltssnsegswvlnllsgnlnyHieHHlfP 228
                 +  ll++++l+   +l+i++++++ ++H++++   ++  +l+l  +   ++s ++w r H++hH+++ +   Dp+ a+r              + +++++ + l+  +   + a +  ++++ +  +          +    +++++   +a  +++ s+++++++++++++ +++ ++++    + H +++ ++++  ++  en+++           +l + + ++H+ HH +P
  MMETSP1325-20131115|4315_1  63 WQTLLWAFILWPISGLGITAGVHRLWAHRSYNAHWTVRLWLMLANSIANQGSIYHWARDHRVHHKHSETNA-DPHNATR--------------GFFYAHVGWLLIKKHKDVVAAGRLLDFSDLHEDGFvmfqkrlDPWFTLFMCYLFPGYVAQHCWGDSFWPSVWVAGALRYCIVLHFTWCVnS-AaHLYGD-HPYDPSSWPSENPFV-----------SLGAIGEGWHNWHHKYP 270
                 67789****************************999999999999999***********************.*******..............****************999999999999999987799998844444444444444444444888988888888888888888888888833.3699988.888888888888866...........****************9 PP

>> PF05545.6  Cbb3-type cytochrome oxidase component FixQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.04   1.8e+02      21      35 ..     142     156 ..     141     160 .. 0.86
   2 ?    8.3   0.1   0.00035       1.6       6      27 ..     178     199 ..     175     205 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.04
   PF05545.6  21 fFigivfWayspkrk 35 
                 fF++ v W++ +k k
  MMETSP1325-20131115|4315_1 142 FFYAHVGWLLIKKHK 156
                 9*********88876 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00035
   PF05545.6   6 lqgfarswgtlllfvfFigivf 27 
                 +q+ ++ w+tl++  +F g+v+
  MMETSP1325-20131115|4315_1 178 FQKRLDPWFTLFMCYLFPGYVA 199
                 677899**************97 PP

>> PF01925.14  Sulfite exporter TauE/SafE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.025   1.1e+02      51      70 ..      26      45 ..      22      48 .. 0.85
   2 ?    9.9   3.2   8.6e-05      0.39     171     219 ..      41      90 ..      36     109 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.025
  PF01925.14 51 galahrrkgnvdwrlllpll 70
                ++++h+++gn++w++++++ 
  MMETSP1325-20131115|4315_1 26 ATVRHYKQGNFNWPMIIYMT 45
                5899**********998875 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 8.6e-05
  PF01925.14 171 llvflvislagllgyallgyvdwpllllvllllpgallGallGar.larr 219
                 ++++++++ ++ lg++  g+v+w++ll++++l p + lG+ +G++ l ++
  MMETSP1325-20131115|4315_1  41 IIYMTFVHYTACLGLVNMGNVTWQTLLWAFILWPISGLGITAGVHrLWAH 90 
                 678999********999**************************9975444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       726  (0.0531012); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.50
# Mc/sec: 1917.09
//
Query:       MMETSP1325-20131115|4321_1  [L=335]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-26   92.8   2.6    8.1e-25   86.8   0.4    2.1  2  PF02028.12 BCCT family transporter
  ------ inclusion threshold ------
      0.011   16.1   0.2      0.011   16.1   0.1    1.8  2  PF04749.12 PLAC8 family


Domain annotation for each model (and alignments):
>> PF02028.12  BCCT family transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.8   0.4   1.2e-28   8.1e-25     378     481 ..      43     153 ..      26     157 .. 0.90
   2 !    6.2   0.0   0.00034       2.3     207     263 ..     206     262 ..     192     308 .. 0.69

  Alignments for each domain:
  == domain 1    score: 86.8 bits;  conditional E-value: 1.2e-28
  PF02028.12 378 eaalfalleql...plssilsilavvliitffvtsaDSatlvlatltsggdenpprkqrvfWgvllgavalvlllagg....leaLqsasiiaalPfalvlllmlvsllka 481
                 e  lf  l+++    ++ +ls++++++++++fvts+DS++lv++ + ++g ++pp+ qr+fW++ +ga+a vll  g     l aLq+++i+++lP+++vl+lm+ sl+ +
  MMETSP1325-20131115|4321_1  43 EDILFDQLASYgqqGFGDFLSVVTMICLVLYFVTSSDSGSLVIDIIGANGIQDPPTLQRIFWALSEGATASVLLNFGTdgnaLRALQTVAIVGGLPYTFVLFLMCQSLYYV 153
                 555666666666669*************************************************************888899*************************9865 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.00034
  PF02028.12 207 selfgiensltvqlliivvitvlatvsavsGldkGikrLSnlnlvlallLllfvlll 263
                 ++l+g++ +  ++++  v ++ ++++ +++G+++ +k+L+ +  +l + L++   + 
  MMETSP1325-20131115|4321_1 206 AKLWGVDFKGQWTVAASVPFATIILFLSLTGIERQMKMLAAAVYILYVTLIAAARFS 262
                 678888544444555555555555666789*******************99876655 PP

>> PF04749.12  PLAC8 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1         2   1.4e+04      55      55 ..     145     145 ..     123     156 .. 0.52
   2 ?   16.1   0.1   1.6e-06     0.011      17     104 ..     191     294 ..     185     296 .. 0.66

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 2
  PF04749.12  55 g 55 
                 +
  MMETSP1325-20131115|4321_1 145 L 145
                 1 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 1.6e-06
  PF04749.12  17 lslf.cpcvlfgknaerlgngsksehsa....lgscllaflllglla..........ll..al..lll.ysallRtkiRekynieg.sacdDclvhlfcppcalcQesr 104
                 l+++ +pc  +g+++ +l   + + +++    +   ++ ++l+              +l  a+  l + + a  R+  R+k +++  ++++D++  l++++++l Q + 
  MMETSP1325-20131115|4321_1 191 LEAMlLPCLPLGRICAKLWGVDFKGQWTvaasV--PFATIILF---LsltgierqmkMLaaAVyiLYVtLIAAARFSARDKCGVKRgDFITDWMLSLVLYFLVLPQLEC 294
                 556669********9999765544444464331..22222222...12346788887333344323343559************6538***************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       540  (0.0394968); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.54
# Mc/sec: 1486.63
//
Query:       MMETSP1325-20131115|4324_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-20   71.8   0.4    5.7e-20   71.4   0.3    1.2  1  PF00924.13 Mechanosensitive ion channel


Domain annotation for each model (and alignments):
>> PF00924.13  Mechanosensitive ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.3   4.2e-24   5.7e-20      15     103 ..     160     248 ..     154     249 .] 0.96

  Alignments for each domain:
  == domain 1    score: 71.4 bits;  conditional E-value: 4.2e-24
  PF00924.13  15 ivlsllgvnvsallavlGalglalglalqdlisnlvaGiillfekpfkiGDlveiggieGtVediglrttkirtfdgrivtiPnsslvt 103
                 +v +  g++vs+++++lG++gl  glal+++ ++ +++++l++++ f+iGD++ ++g    V+ igl+tt++r  +g+i+++ ns+lv+
  MMETSP1325-20131115|4324_1 160 VVVDRAGYDVSTVVSSLGVTGLLTGLALKNYAEDALSSFTLMTDRRFRIGDWIMFNGQFQVVQRIGLLTTRLRLSSGQIHYVSNSMLVK 248
                 567889********************************************************************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 1147.49
//
Query:       MMETSP1325-20131115|4325_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0044   16.6   1.8     0.0045   16.6   1.3    1.2  1  PF10099.4 Anti-sigma-K factor rskA
  ------ inclusion threshold ------
      0.058   13.0   2.1      0.085   12.5   1.5    1.3  1  PF11298.3 Protein of unknown function (DUF3099)


Domain annotation for each model (and alignments):
>> PF10099.4  Anti-sigma-K factor rskA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   1.3   6.6e-07    0.0045      32      67 ..      56      91 ..      18      95 .. 0.65

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 6.6e-07
   PF10099.4 32 lrrWrglalaaaAaaavlalalllvqataaaaqpaa 67
                l++W + +++aa+a+av+a+a+++++++ a aqp+a
  MMETSP1325-20131115|4325_1 56 LPHWWWRTAVAASAVAVVAVAVVVGKRRGASAQPEA 91
                445555555666666666666666634444444443 PP

>> PF11298.3  Protein of unknown function (DUF3099)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.5   1.2e-05     0.085      30      69 ..      49      87 ..      40      91 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.2e-05
   PF11298.3 30 clilaavvyslgwlalliivlavpLPwiAVvlANdrppre 69
                +++ + ++ + +w++ ++++ av    +AVv+   r  + 
  MMETSP1325-20131115|4325_1 49 VVLSVRFLPH-WWWRTAVAASAVAVVAVAVVVGKRRGASA 87
                5556666776.********************998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       764  (0.0558806); expected 273.4 (0.02)
Passed bias filter:                      613  (0.0448362); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|4326_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-09   35.0   0.0    9.9e-09   34.5   0.0    1.1  1  PF01494.14 FAD binding domain
    3.3e-06   26.0   0.0    4.5e-06   25.5   0.0    1.1  1  PF08491.5  Squalene epoxidase


Domain annotation for each model (and alignments):
>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.0   1.5e-12   9.9e-09     285     345 ..       5      65 ..       2      73 .. 0.92

  Alignments for each domain:
  == domain 1    score: 34.5 bits;  conditional E-value: 1.5e-12
                 ECSSEETTEE-----SEE--S------HHHHHHHHHHHHHHHHHHH--B-GGGGGHHHHHH CS
  PF01494.14 285 aeryrkgrvflaGDAaHihpPtgGqGlNtaiqDaynLawkLaavlkGeAkeelLdtYeeer 345
                  +++++g v l+GDA+H + P  GqG   ai+Day L   L  v +  A +e L ++ ++r
  MMETSP1325-20131115|4326_1   5 LRSWSDGSVTLMGDAVHPMMPNLGQGGCQAIEDAYVLTEVLKGVNDTAAVPEALSSFYRKR 65 
                 689*******************************************999999999988877 PP

>> PF08491.5  Squalene epoxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   6.6e-10   4.5e-06     132     204 ..      13      82 ..       6      89 .. 0.90

  Alignments for each domain:
  == domain 1    score: 25.5 bits;  conditional E-value: 6.6e-10
   PF08491.5 132 lillGDalnmRHPltggGmtvalsDivllskllkpledlsdeekvleelksfyvkRkeldavvnvLsialykl 204
                 + l+GDa+    P  g G   a++D+++l+++lk++   +d+++v e+l+sfy+kR    +++  Ls    +l
  MMETSP1325-20131115|4326_1  13 VTLMGDAVHPMMPNLGQGGCQAIEDAYVLTEVLKGV---NDTAAVPEALSSFYRKRIVRTTIIQFLSRLASDL 82 
                 679*****9999***********************9...9************************999766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 826.50
//
Query:       MMETSP1325-20131115|4331_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.33s 00:00:00.63 Elapsed: 00:00:00.60
# Mc/sec: 163.75
//
Query:       MMETSP1325-20131115|4327_1  [L=395]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-31  106.6   0.1      1e-30  106.2   0.0    1.2  1  PF00650.15 CRAL/TRIO domain
    1.6e-06   28.0   0.0    2.3e-06   27.4   0.0    1.2  1  PF13716.1  Divergent CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   0.0   1.5e-34     1e-30       4     159 .]      88     253 ..      85     253 .. 0.87

  Alignments for each domain:
  == domain 1    score: 106.2 bits;  conditional E-value: 1.5e-34
  PF00650.15   4 leggkvgihgrDkngrpvlylrlgrfdpk.......klseeelvrllllvlerllklleedgqiegvtvviDmkglslskmlwkp.i....sllkkilkilqdnyPerlkkilivnaPklfkvafklvkpfldektreKikfvspsntpatlekyidpeqlpkelGGt 159
                 + +++ +ih++ +ng  ++y r+g+            ++ +++vr+  +++e++ + l++ +++++++ ++D +g+++s+++  p      +l+ k+++++q++yPer +k++ivnaP++f+ ++++++p +de+t++Ki+++++ n  a+l++yidp ++pke+GG+
  MMETSP1325-20131115|4327_1  88 KANYPHYIHKQARNGMYCYYERPGLASFPnlitneqGFTPADIVRHYNFITEYIWEVLDP-QEEAKMVSIWDVTGVKMSDLSGGPyAsrtrKLMIKTMQTMQQHYPERSGKLFIVNAPSWFTNLWRMISPHVDEATKKKISILGK-NYHAELFEYIDPANVPKEFGGE 253
                 567899******************55544477776566677**************88887.9****************99987774422224678899*********************************************66.5669*****************6 PP

>> PF13716.1  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   3.3e-10   2.3e-06      32     142 ..     136     252 ..     117     258 .. 0.82

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 3.3e-10
   PF13716.1  32 kllkyllhtledeivgkpyvlVyfhtglss........enkpslswlkklyktlprrykknlkkvylvhpstflksilstllslfvskkflrkkviyi..sslseLseyiditqlkkslpg 142
                  +  y+++ l d+ +++++v + + tg++           +   ++++k+++t++++y+++  k+++v++ +++  +   + s+ v +   +kk+  +  ++++eL+eyid+++++k+++g
  MMETSP1325-20131115|4327_1 136 FITEYIWEVL-DPQEEAKMVSIWDVTGVKMsdlsggpyA-SRTRKLMIKTMQTMQQHYPERSGKLFIVNAPSWFTNLW-RMISPHVDEAT-KKKISILgkNYHAELFEYIDPANVPKEFGG 252
                 5566888888.5546666888888888877888888853.4478999999********************99999999.66688889999.99988853378*****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.36s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1660.63
//
Query:       MMETSP1325-20131115|4329_1  [L=350]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00023   20.7   6.3    0.00065   19.2   0.5    3.1  3  PF02183.13 Homeobox associated leucine zipper
  ------ inclusion threshold ------
      0.094   11.5   0.3       0.25   10.1   0.1    1.6  2  PF02016.10 LD-carboxypeptidase
       0.11   12.2   7.4       0.19   11.4   0.9    3.1  4  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.59    7.4   8.3       0.72    7.1   0.6    2.1  2  PF05478.6  Prominin
       0.62    9.9  20.9       0.49   10.2   0.2    3.5  3  PF13863.1  Domain of unknown function (DUF4200)
       0.82    8.6   5.8       0.17   10.8   0.8    2.0  2  PF02331.10 Apoptosis preventing protein
          1    8.3   4.2         13    4.7   0.9    2.3  2  PF04582.7  Reovirus sigma C capsid protein
        1.2    8.7   6.1        0.2   11.2   1.4    1.7  2  PF14367.1  Domain of unknown function (DUF4411)
        1.7    8.1  17.8        1.7    8.0   4.4    2.7  3  PF04156.9  IncA protein
          2    6.6  18.7        2.1    6.5   3.5    2.7  3  PF03961.8  Protein of unknown function (DUF342)
        3.6    7.0  15.7      0.057   12.7   1.2    3.9  4  PF04977.10 Septum formation initiator
        7.3    6.9   8.6          3    8.1   0.8    3.0  3  PF02465.13 Flagellar hook-associated protein 2 C-terminus
        8.8    6.1  22.5        5.1    6.8   0.0    4.6  4  PF12329.3  TATA element modulatory factor 1 DNA binding


Domain annotation for each model (and alignments):
>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.5   6.1e-07   0.00065       7      43 ..      36      72 ..      36      74 .. 0.96
   2 ?   -3.5   0.0       7.5   7.8e+03      11      19 ..     150     158 ..     145     164 .. 0.50
   3 ?    3.3   0.1     0.058        61      26      43 ..     225     242 ..     216     244 .. 0.86

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 6.1e-07
  PF02183.13  7 YelLKrnydaLkaendsLqkEkekLraevlsLkeklq 43
                Y+ +K++ daL+++ d L +E  +L ae+ +L++k++
  MMETSP1325-20131115|4329_1 36 YNEMKKQVDALTEQEDGLASEMTSLEAEKNALTDKVE 72
                899******************************9985 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 7.5
  PF02183.13  11 KrnydaLka 19 
                  ++ ++L a
  MMETSP1325-20131115|4329_1 150 NKQVENLEA 158
                 444444444 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.058
  PF02183.13  26 kEkekLraevlsLkeklq 43 
                 +E+e+L ++++ L + +q
  MMETSP1325-20131115|4329_1 225 SENERLVTQLKDLEGSVQ 242
                 799999999999988776 PP

>> PF02016.10  LD-carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00024      0.25     189     253 ..     128     201 ..     109     212 .. 0.74
   2 ?   -2.1   0.0       1.2   1.3e+03      11      41 ..     221     251 ..     211     265 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00024
  PF02016.10 189 p....kdlkgkILfLE....dveekpyridrmLtqLklagilekvkgiilGrftec.eededegeeleevlkev 253
                 +    k+++++I f+E     +++++++++ ++t L+l ++ + +++i+ G+ ++   e+ ++ e+  e+lk+v
  MMETSP1325-20131115|4329_1 128 IlhriKKFRKSINFMEwehaYMNKQVENLEAYFTDLQLLKVTKSIQAIMKGDTQNKaREKMEKAEARIEILKRV 201
                 44444677888888883332356669***************************999766666666666666665 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.2
  PF02016.10  11 aedeerleraikrleslglevvvgenalark 41 
                 +e++++ er +++l++l  +v+v e++++++
  MMETSP1325-20131115|4329_1 221 RERRSENERLVTQLKDLEGSVQVREAIYRSR 251
                 3344577999999999999999999999874 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.9   0.00018      0.19      25      64 ..      33      72 ..      21      83 .. 0.85
   2 ?   -0.9   0.0       1.2   1.3e+03      44      52 ..     127     135 ..     108     164 .. 0.46
   3 ?   -0.8   0.0       1.2   1.2e+03      21      51 ..     132     162 ..     120     182 .. 0.60
   4 ?    2.5   0.2      0.11   1.2e+02      31      85 ..     209     242 ..     163     246 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00018
   PF06103.6 25 kktldevnktvkkltkqvdgitketeellaktnelleDvn 64
                + + +e++k v+ lt+q dg+ +e++ l a+ n+l++ v+
  MMETSP1325-20131115|4329_1 33 TAVYNEMKKQVDALTEQEDGLASEMTSLEAEKNALTDKVE 72
                456899******************************9986 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 1.2
   PF06103.6  44 gitketeel 52 
                 +i++ +++ 
  MMETSP1325-20131115|4329_1 127 QILHRIKKF 135
                 333333332 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 1.2
   PF06103.6  21 lkklkktldevnktvkkltkqvdgitketee 51 
                 +kk++k ++ ++   + ++kqv+++    ++
  MMETSP1325-20131115|4329_1 132 IKKFRKSINFMEWEHAYMNKQVENLEAYFTD 162
                 4455555555555555566666655554443 PP

  == domain 4    score: 2.5 bits;  conditional E-value: 0.11
   PF06103.6  31 vnktvkkltkqvdgitketeellaktnelleDvneKvetldpvfqavadlgesvs 85 
                 ++                         +l + v e+ ++ + ++++ +dl  sv+
  MMETSP1325-20131115|4329_1 209 IKGL---------------------IAKLSQGVRERRSENERLVTQLKDLEGSVQ 242
                 2222.....................335667777777777777777777766665 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   1.0    0.0049       5.1     218     280 ..       6      67 ..       4      80 .. 0.84
   2 ?    7.1   0.6   0.00069      0.72     610     703 ..     150     246 ..     110     259 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0049
   PF05478.6 218 eagenlgkrikdelksevlpvLeevvelgqvlkemkeaLesvsktvkelkeegsqlesglssv 280
                 ++ e++ +++++  k++++++ +ev++ ++v +emk++++ +++ +  l +e + le++ +++
  MMETSP1325-20131115|4329_1   6 SIDEMVWDKLQELRKAKIVKE-AEVKTQTAVYNEMKKQVDALTEQEDGLASEMTSLEAEKNAL 67 
                 688899999999999999999.88999899999999999999999999999999988775554 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.00069
   PF05478.6 610 skflkqlkkeltevnLnslaeeLeelanalsegklkkelkn...eakdlrslqqnlveplesllekLnssvksLdekssklqeavkdvLaeveaaea 703
                 +k +++l+  +t + L ++++++++  +  ++ k+++++++     + l+ ++ +++++++ l++kL++ v++  ++++ l  + kd+  +v+  ea
  MMETSP1325-20131115|4329_1 150 NKQVENLEAYFTDLQLLKVTKSIQAIMKGDTQNKAREKMEKaeaRIEILKRVHGDKADKIKGLIAKLSQGVRERRSENERLVTQLKDLEGSVQVREA 246
                 4557899999***************999888888666665411145678999*********************999999999999998888776665 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   2.6      0.03        31      50     105 ..      19      72 ..       7      76 .. 0.74
   2 ?   10.2   0.2   0.00046      0.49      75     115 ..     124     164 ..     110     173 .. 0.87
   3 ?    4.3   2.5     0.031        33      58     108 ..     184     235 ..     173     238 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.03
   PF13863.1  50 kfnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekleekle 105
                 +  k++k++e k++ a+  ++e kk+ + ++e+   l +++++l+ae+++l +k+e
  MMETSP1325-20131115|4329_1  19 RKAKIVKEAEVKTQTAV--YNEMKKQVDALTEQEDGLASEMTSLEAEKNALTDKVE 72 
                 34566666666666665..7788888889999999999999999999999999987 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00046
   PF13863.1  75 ekkekeeeikklkaqleelkaeiekleekleeyqkYeefLe 115
                  k+++ + ikk++++++ ++ e++ + +++e+++ Y++ L+
  MMETSP1325-20131115|4329_1 124 DKVQILHRIKKFRKSINFMEWEHAYMNKQVENLEAYFTDLQ 164
                 688999******************************98665 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.031
   PF13863.1  58 neakreraekkaeeekkekkekeeeikklkaqlee.lkaeiekleekleeyq 108
                 + +k e+ae ++e  k+ +  k  +ik l a+l++  +++++++e+ + +++
  MMETSP1325-20131115|4329_1 184 AREKMEKAEARIEILKRVHGDKADKIKGLIAKLSQgVRERRSENERLVTQLK 235
                 5678999*************************97548888999999888876 PP

>> PF02331.10  Apoptosis preventing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2      0.57     6e+02     237     261 ..      19      43 ..       3      93 .. 0.50
   2 ?   10.8   0.8   0.00016      0.17     211     275 ..     124     187 ..     110     208 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.57
  PF02331.10 237 nkslivlaeelktesmyeksekdnw 261
                  k  iv++ e kt++      k++ 
  MMETSP1325-20131115|4329_1  19 RKAKIVKEAEVKTQTAVYNEMKKQV 43 
                 3444445555554433222222222 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00016
  PF02331.10 211 kpvqslellkefidseevlrydeasknkslivlaeelktesmyeksekdnwkiingnieDkdskv 275
                   vq l+++k+f +s++ +++++a  nk++  l+  ++  +   k+ k    i+ g  + k +++
  MMETSP1325-20131115|4329_1 124 DKVQILHRIKKFRKSINFMEWEHAYMNKQVENLEAYFTDLQ-LLKVTKSIQAIMKGDTQNKAREK 187
                 689**************************999999887655.56666777777766666655554 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.9     0.012        13      33     111 ..      11      89 ..       7     140 .. 0.78
   2 ?    4.1   0.1     0.019        19      18      96 ..     167     244 ..     161     275 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.012
   PF04582.7  33 vyerltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahd 111
                 v ++l++l  a+   +  v++ ++   +++ +++ +t+  d + +e+++l++e +al + v+    +l  l  l ++++
  MMETSP1325-20131115|4329_1  11 VWDKLQELRKAKIVKEAEVKTQTAVYNEMKKQVDALTEQEDGLASEMTSLEAEKNALTDKVELADRNLEMLVWLKQGQN 89 
                 6788888888888888888888888889999999999999999999999999999999999988888888776666554 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.019
   PF04582.7  18 sltssv.tinpGdlt.avyerltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdsl 96 
                  +t s+ +i +Gd   + +e++ + ea  + l++  ++   k+  l a+l    + + + ++e + l t+++ l+ sv+  
  MMETSP1325-20131115|4329_1 167 KVTKSIqAIMKGDTQnKAREKMEKAEARIEILKRVHGDKADKIKGLIAKLS---QGVRERRSENERLVTQLKDLEGSVQVR 244
                 455554167889864268999*************99999999999988876...566778888888888888888888764 PP

>> PF14367.1  Domain of unknown function (DUF4411)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.4   0.00019       0.2      24     118 ..      11     114 ..       5     118 .. 0.79
   2 ?   -2.1   0.1       2.3   2.5e+03      69      86 ..     162     179 ..     130     208 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00019
   PF14367.1  24 fWewleqlve.....egklisikeVleElekg.......edelakwakenedkkslistddlavleevaevlkwvivnsekykkaakkeflsvADpwLiAlAkaena 118
                 +W++l++l +     e ++ +  +V++E++k+       ed la+ + ++e+ ++   td+ ++ ++  e+l w ++ +++ ++  ++  ++++D  Li +  + ++
  MMETSP1325-20131115|4329_1  11 VWDKLQELRKakivkEAEVKTQTAVYNEMKKQvdalteqEDGLASEMTSLEA-EKNALTDKVELADRNLEMLVWLKQGQNELQQ--EAMVTDWSDGLLIPTSRVSKC 114
                 799998887766777999**************99999999999988888888.5666677779999999999996444444444..456669999999988877665 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 2.3
   PF14367.1  69 stddlavleevaevlkwv 86 
                 + + l+v++++++++k  
  MMETSP1325-20131115|4329_1 162 DLQLLKVTKSIQAIMKGD 179
                 333344444444444443 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   4.0     0.056        59     112     183 ..      37      90 ..       5      98 .. 0.43
   2 ?    8.0   4.4    0.0016       1.7      85     182 ..     127     242 ..      85     248 .. 0.76
   3 ?    6.9   2.0    0.0036       3.8     122     182 ..     185     242 ..     179     299 .. 0.64

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.056
   PF04156.9 112 edleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqeklae 183
                 +              + ++++++l+e+ + la+e++ l+     +k+++ ++++ ++r+ e l +l++ ++e
  MMETSP1325-20131115|4329_1  37 N--------------EMKKQVDALTEQEDGLASEMTSLE----AEKNALTDKVELADRNLEMLVWLKQGQNE 90 
                 2..............223444444444444444444444....33334444444333443333334443333 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0016
   PF04156.9  85 esesqlseleeeleqleerlaeleseledleedlellq.....................eelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqekla 182
                  +  +++++ + +  +e + a   +++e+le ++++lq                     e  ++ e+r+e l++ + ++a++i+ l+    +l + v+e rse erl ++l +l+ +++
  MMETSP1325-20131115|4329_1 127 QILHRIKKFRKSINFMEWEHAYMNKQVENLEAYFTDLQllkvtksiqaimkgdtqnkarEKMEKAEARIEILKRVHGDKADKIKGLI---AKLSQGVRERRSENERLVTQLKDLEGSVQ 242
                 44456666666666666666666666666666666666666666688888998999999****************************...88999999999999999999999998887 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0036
   PF04156.9 122 qeelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqekla 182
                 +e  ++ e+r+e l++ + ++a++i+ l+    +l + v+e rse erl ++l +l+ +++
  MMETSP1325-20131115|4329_1 185 REKMEKAEARIEILKRVHGDKADKIKGLI---AKLSQGVRERRSENERLVTQLKDLEGSVQ 242
                 45666666666666666666666666666...55566666666666666666666665555 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   2.9     0.003       3.1     348     408 ..      13      74 ..       3      92 .. 0.82
   2 ?    0.7   0.1      0.12   1.2e+02     351     408 ..     112     163 ..      78     178 .. 0.69
   3 ?    6.5   3.5     0.002       2.1     341     408 ..     179     244 ..     150     273 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.003
   PF03961.8 348 eeleklkkk.lkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                 ++l++l+k+ + k  + k + ++  e+k+q++ l+e+   l +e+++leae+++l +++e  
  MMETSP1325-20131115|4329_1  13 DKLQELRKAkIVKEAEVKTQTAVYNEMKKQVDALTEQEDGLASEMTSLEAEKNALTDKVELA 74 
                 4566666666777777788999999*******************************999876 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.12
   PF03961.8 351 eklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                  k+++++k        g+ + ++   ++k +++ + ++ e + ++++ ++l++ + + 
  MMETSP1325-20131115|4329_1 112 SKCNDTIKA------LGADKVQILHRIKKFRKSINFMEWEHAYMNKQVENLEAYFTDL 163
                 444444444......4445667888899999999999999999999999999988877 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.002
   PF03961.8 341 eeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                 +  ++ +e++ek +++++ l+  +   +  +++k  ++kl +   + ++e e l ++lk+l+ +++ +
  MMETSP1325-20131115|4329_1 179 DTQNKAREKMEKAEARIEILKRVHG--DKADKIKGLIAKLSQGVRERRSENERLVTQLKDLEGSVQVR 244
                 3567779***********9999655..5579*******************************999988 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.2   5.4e-05     0.057      14      57 ..      31      73 ..      28      89 .. 0.87
   2 ?   -1.6   0.0       1.6   1.7e+03      35      44 ..     148     157 ..     116     180 .. 0.60
   3 ?   -0.8   0.1      0.88   9.2e+02      33      51 ..     181     199 ..     168     206 .. 0.77
   4 ?    2.3   0.3       0.1   1.1e+02      26      52 ..     213     239 ..     205     253 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.4e-05
  PF04977.10 14 sgllalyqlkqeiaalqaelaklkaeneeLeaevkdLksdedyi 57
                 +   ++++k++++al+++ + l  e ++Leae + L+ d+  +
  MMETSP1325-20131115|4329_1 31 TQTAVYNEMKKQVDALTEQEDGLASEMTSLEAEKNALT-DKVEL 73
                567789*******************************5.77655 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.6
  PF04977.10  35 klkaeneeLe 44 
                  ++++ e+Le
  MMETSP1325-20131115|4329_1 148 YMNKQVENLE 157
                 3333333333 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.88
  PF04977.10  33 laklkaeneeLeaevkdLk 51 
                  +k +++ e+ ea+++ Lk
  MMETSP1325-20131115|4329_1 181 QNKAREKMEKAEARIEILK 199
                 5677777888888888775 PP

  == domain 4    score: 2.3 bits;  conditional E-value: 0.1
  PF04977.10  26 iaalqaelaklkaeneeLeaevkdLks 52 
                 ia+l + + + + ene+L  ++kdL+ 
  MMETSP1325-20131115|4329_1 213 IAKLSQGVRERRSENERLVTQLKDLEG 239
                 788888899999999999999999953 PP

>> PF02465.13  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.8    0.0029         3      27      63 ..      25      62 ..       5      78 .. 0.65
   2 ?    1.2   0.3      0.41   4.3e+02      15      62 ..     122     170 ..     113     187 .. 0.70
   3 ?    0.7   0.2      0.57     6e+02       6      42 ..     168     202 ..     164     232 .. 0.67

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0029
  PF02465.13 27 qeqkleaklsaygtlksalsdlqsalkalkst.safnt 63
                +e++++++   y+++k+++++l ++ + l+s+ +++ +
  MMETSP1325-20131115|4329_1 25 KEAEVKTQTAVYNEMKKQVDALTEQEDGLASEmTSLEA 62
                56777888888888888888888777777664333322 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.41
  PF02465.13  15 aaerapl.drlkqqeqkleaklsaygtlksalsdlqsalkalkstsafn 62 
                  a++ ++  r+k+ +++++    + + +++++++l  ++++l++ + ++
  MMETSP1325-20131115|4329_1 122 GADKVQIlHRIKKFRKSINFMEWEHAYMNKQVENLEAYFTDLQLLKVTK 170
                 4555555588888888888888888889999999999999997654333 PP

  == domain 3    score: 0.7 bits;  conditional E-value: 0.57
  PF02465.13   6 teslvkklmaaerapldrlkqqeqkleaklsaygtlk 42 
                 +++ ++++m+ +++++    ++ +k ea+++ ++ + 
  MMETSP1325-20131115|4329_1 168 VTKSIQAIMKGDTQNK--AREKMEKAEARIEILKRVH 202
                 5566677777776655..4566666666666666654 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   4.1     0.019        20      20      71 ..      14      65 ..       8      80 .. 0.78
   2 ?    6.8   0.0    0.0048       5.1      30      68 ..     127     165 ..     116     171 .. 0.85
   3 ?    1.9   0.5      0.16   1.7e+02      48      69 ..     180     201 ..     173     206 .. 0.70
   4 ?    1.1   0.3      0.29     3e+02      34      60 ..     212     238 ..     204     246 .. 0.55

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.019
   PF12329.3 20 EgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerlk 71
                ++++L+k +  +++++k  ++  +e+ k+++ l+++ + l +e+ +le+++ 
  MMETSP1325-20131115|4329_1 14 KLQELRKAKIVKEAEVKTQTAVYNEMKKQVDALTEQEDGLASEMTSLEAEKN 65
                5677777777788888888888888888888888888888888888887765 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0048
   PF12329.3  30 khnntikkLrkknkelekeieelkkkleklekeleelee 68 
                 +    ikk rk+++ +e e +  +k++e le+ + +l+ 
  MMETSP1325-20131115|4329_1 127 QILHRIKKFRKSINFMEWEHAYMNKQVENLEAYFTDLQL 165
                 55568***************************9999985 PP

  == domain 3    score: 1.9 bits;  conditional E-value: 0.16
   PF12329.3  48 eieelkkkleklekeleeleer 69 
                 +++++ +k+ek e+ +e l++ 
  MMETSP1325-20131115|4329_1 180 TQNKAREKMEKAEARIEILKRV 201
                 5666677777777777777665 PP

  == domain 4    score: 1.1 bits;  conditional E-value: 0.29
   PF12329.3  34 tikkLrkknkelekeieelkkklekle 60 
                  i kL + ++e  +e e+l  +l++le
  MMETSP1325-20131115|4329_1 212 LIAKLSQGVRERRSENERLVTQLKDLE 238
                 455555555555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1173  (0.0857958); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.92u 0.41s 00:00:01.33 Elapsed: 00:00:00.63
# Mc/sec: 1331.31
//
Query:       MMETSP1325-20131115|4332_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 576.15
//
Query:       MMETSP1325-20131115|4330_1  [L=532]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   6.3e-140  465.5   2.1   9.4e-140  465.0   1.4    1.2  1  PF00224.16 Pyruvate kinase, barrel domain
    3.5e-13   49.0   1.5    9.3e-13   47.6   1.0    1.7  1  PF02887.11 Pyruvate kinase, alpha/beta domain
    0.00015   20.6   1.0    0.00034   19.4   0.7    1.6  1  PF03328.9  HpcH/HpaI aldolase/citrate lyase family


Domain annotation for each model (and alignments):
>> PF00224.16  Pyruvate kinase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  465.0   1.4  2.1e-143  9.4e-140       2     345 ..      58     400 ..      57     403 .. 0.98

  Alignments for each domain:
  == domain 1    score: 465.0 bits;  conditional E-value: 2.1e-143
                 --SEEEEEE--TTTSHHHHHHHHH----EEEEETT---HHHHHHHHHHHHHHHHTTTTS.-EEEEE----------B-----SB------EEEEE--CCCTTB--TTEEE-S-TTHHHHS----EEEE----EEEEEEE----E.EEEEEEE---B------B---------SS-HHHHHHH.H---TT--SEEEETTE-SHHHHHHHHHH-------SEEEEEE-S----TTHHHHHHH----EEE-------S-CCCHHHHHHHH---TTT-----EEESSTTGGGGTSSS--CHHHHHHHHHHH----EEEE---------HHHHHHHHHHHHHHHHHCS-HH CS
  PF00224.16   2 rrtkivctlGPasesvekleklieaGlnvvRlnfshGsheehkeridnvreaeeklgkk.vaillDtkGpeiRtgllkdgkkeielkegdkllvstdeklkkegdkekiavdyknlvkdvevGktilvdDGvlslkvlevddekelkvevenegvlssrkgvnlpgtkvdlpalsekDkadl.kfgvkqgvdliaasfvRkaedvkevRevleekgkeikiiakienqegvenldeileasdgimvaRGDlGieipaekvvlaqkllikkcnlagkpvitatqmlesmiknPrptRaevsDvanavldGaDavmLsgetakGkyPveavkamaevaleaekalkel 345
                 r+tk+vct+GPa  +ve+l k+++ G+nv RlnfshG+he h ++i+++rea+++  +  ++illDtkGpeiRtg+++d   +i+l+ g++l++ td ++   gd++ ia +y+ l ++v +G++il++DG ++++v+++ ++  + ++ven++ +++rk++nlpg+kvdlp l  kD +dl +fg+ qgvd++aasfv + ed++ +Re l+e+g +ikiiakienqeg+en+deilea+dgimvaRGDlG+eip e+v++aqkl+i++cnlagk vitatqmlesm+  PrptRae+sDvanavldG+DavmLsgeta G++P eav+ m ++++eaek+++++
  MMETSP1325-20131115|4330_1  58 RNTKVVCTMGPACWDVETLGKMMDIGMNVCRLNFSHGDHEAHGATIARIREAAAARPHLnIGILLDTKGPEIRTGFFQDKGGKIKLTCGQTLRIVTDYSFL--GDANCIACTYEALPQAVVPGNKILMADGSVTVTVTAIGENY-VDTRVENDAAIGERKNMNLPGVKVDLPVLQPKDVDDLvNFGIPQGVDYVAASFVQSKEDIAMIRETLGEAGANIKIIAKIENQEGLENFDEILEATDGIMVARGDLGMEIPPEEVFIAQKLMIERCNLAGKSVITATQMLESMTGAPRPTRAEASDVANAVLDGTDAVMLSGETAGGAFPLEAVQCMVSTSMEAEKMINYE 400
                 89**************************************************99998877*******************8889**************9998..77***********************************9999.**********************************99648**************************************************************************************************************************************************************9875 PP

>> PF02887.11  Pyruvate kinase, alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   1.0     2e-16   9.3e-13       2     101 ..     418     516 ..     417     521 .. 0.89

  Alignments for each domain:
  == domain 1    score: 47.6 bits;  conditional E-value: 2e-16
                 HHHHHHHHHHHHHHT-SEEEEE-----HHHHHHHT--SSEEEEEES-HHHHH--T.EEE--ETTE-SHHCHCHHHHHHHHHHHHHHTTS--SSSEEEEEE- CS
  PF02887.11   2 eaiaeaaveaAkelgakaIvvltesGstarlvskyrpgvpIlavtpseetarqla.lvwGvhplvgkeraistdeviaealraalkkglikkgdevvvtag 101
                 e++  aav+++ e+gakaI+v+ +  +  +l  kyrp+vp++  t+ ++ arq +    +v+++v++e +  +  +   a++ ++++g++++gd vv++  
  MMETSP1325-20131115|4330_1 418 ESTTAAAVKTSLETGAKAIIVVNDNERILELTVKYRPQVPVILATTIAQKARQTSgYNKNVYAVVVDEAD--PSTMGGSAIAQITEQGFVEAGDVVVMIMQ 516
                 68899***********************************6666666666666666*******7777766..**************************976 PP

>> PF03328.9  HpcH/HpaI aldolase/citrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.7   7.5e-08   0.00034      93     158 ..     253     309 ..     226     369 .. 0.76

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 7.5e-08
                 --SHHHHHHHHHHTSHTT-----CHHH-EEEEB--SHHHHHTHHHHH.TSTTEEEEB---HHHHHH- CS
   PF03328.9  93 vetaeevrevvkilrypekgirganketcllaqiESaegvknadeIa.avegldgvalGaeDlsadl 158
                 v+++e+++ + + l         a ++++++a iE +eg++n deI+ a    dg++++  Dl +++
  MMETSP1325-20131115|4330_1 253 VQSKEDIAMIRETLG-------EAGANIKIIAKIENQEGLENFDEILeA---TDGIMVARGDLGMEI 309
                 444444444433333.......3579********************944...567777788877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       496  (0.0362785); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.88u 0.36s 00:00:01.24 Elapsed: 00:00:00.56
# Mc/sec: 2236.60
//
Query:       MMETSP1325-20131115|4334_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.32s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 910.62
//
Query:       MMETSP1325-20131115|4335_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-32  112.2   0.5      3e-32  111.9   0.3    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.9   0.3   2.2e-36     3e-32       8     155 ..      46     202 ..      40     203 .. 0.78

  Alignments for each domain:
  == domain 1    score: 111.9 bits;  conditional E-value: 2.2e-36
                 XXXXXXXXXXXXX.---.-TTTTT--------TTT--------------.----S--TT--..STT.--.....---.....--S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT------- CS
  PF00504.16   8 slpgdlgfDplglskdp.tlkrlreaEliHGRvAMlavlGalvpelltk.lsaaskfaelpa.wae.ag.....gls.....lptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                  l+g++gfDpl+l+kd+ +l+++r aE++HGR+AM+a+ G++++el  + +    +  ++p+ ++e +g       +      p + ++++ ++ +++e   e+ +   +s      +  G+lgfdplgl  +d+e kae++l+E+k+GRlAM+a+++f++ +
  MMETSP1325-20131115|4335_1  46 MLAGNVGFDPLMLAKDApALAQYRDAEVKHGRLAMVAAFGWVAAELWDDdI---AAAFKIPSvLQEnNGlnpslL-DgglelPPVAYWAAVAAFTAWVENVGEKCK--RDSLVRDGTYLAGDLGFDPLGLYpTDAEGKAEMQLAELKHGRLAMLAITSFALDE 202
                 3799***********999***************************997742...344577886555344544330.133445666778788899999998643333..233335567889***************************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.42s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 986.19
//
Query:       MMETSP1325-20131115|4333_1  [L=396]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-52  173.9   0.8    2.7e-25   88.1   0.0    2.1  2  PF02847.12 MA3 domain


Domain annotation for each model (and alignments):
>> PF02847.12  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.1   0.0     2e-29   2.7e-25       1     113 []      17     128 ..      17     128 .. 0.98
   2 !   84.2   0.4   3.3e-28   4.5e-24       2     107 ..     177     282 ..     176     285 .. 0.96

  Alignments for each domain:
  == domain 1    score: 88.1 bits;  conditional E-value: 2e-29
  PF02847.12   1 lkrkiflileeylssgdyeeavskleeLklpkqhheivkillecaleekktyneyyalLlsklceknlisskqfekgfsrvlesledleldipeairnlaeflarliaedilp 113
                 +kr + + l+ey+ss+d+ e +  ++eL+ p++h e+vk+++++a+++k +++e +++Lls     +l +++q+ kgf+r++e ++dle+d+p a ++ a flar+++++i+p
  MMETSP1325-20131115|4333_1  17 FKRRVVEALNEYFSSEDVTETIGTIQELGCPEYHYEVVKRAISMAMDRKERERELVSKLLSASS-PDLMTTDQLGKGFERLFEFIDDLEIDTPGATEITAAFLARAVVDEIIP 128
                 79999*********************************************************99.*********************************************986 PP

  == domain 2    score: 84.2 bits;  conditional E-value: 3.3e-28
  PF02847.12   2 krkiflileeylssgdyeeavskleeLklpkqhheivkillecaleekktyneyyalLlsklceknlisskqfekgfsrvlesledleldipeairnlaeflarli 107
                 k +i  +l+eyl s+ ++ea ++++e+k+p++hhe+vk+++e +l++ + ++++++ Ll++l++++ +s+ q+e+gf ++ ++l dl+ld+p+a + +  fla + 
  MMETSP1325-20131115|4333_1 177 KVAIDQLLNEYLLSKQFSEAERCVREMKVPHFHHELVKRAVEAVLDKPSDEQRAMSELLAHLYKSEAVSPAQLEQGFRKLSDKLSDLVLDSPNAASVIDAFLADAN 282
                 668999*****************************************999****************************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       608  (0.0444705); expected 273.4 (0.02)
Passed bias filter:                      507  (0.0370831); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.51s 00:00:01.17 Elapsed: 00:00:00.50
# Mc/sec: 1897.91
//
Query:       MMETSP1325-20131115|4338_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.1   1.8      0.028   14.0   1.3    1.1  1  PF01636.18 Phosphotransferase enzyme family
      0.051   13.3   0.6      0.051   13.3   0.4    1.7  2  PF03310.8  Caulimovirus DNA-binding protein
      0.052   12.7   3.4      0.061   12.5   2.3    1.2  1  PF00698.16 Acyl transferase domain
      0.054   13.8   0.4      0.054   13.8   0.3    2.1  2  PF11365.3  Protein of unknown function (DUF3166)
      0.056   13.2   6.6       0.59    9.9   0.6    2.2  2  PF05823.7  Nematode fatty acid retinoid binding protein (Gp-FAR-1)
      0.095   12.8   4.8       0.12   12.6   0.6    2.1  2  PF12998.2  Inhibitor of growth proteins N-terminal histone-binding
       0.34   10.5   1.7        1.4    8.5   0.5    2.1  2  PF11803.3  UDP-glucuronate decarboxylase N-terminal
       0.37   10.9   8.9       0.77    9.9   6.1    1.5  1  PF03234.9  Cdc37 N terminal kinase binding
        1.2    9.3   5.7        9.4    6.4   0.3    2.3  2  PF01503.12 Phosphoribosyl-ATP pyrophosphohydrolase
        1.3    9.2  16.3       0.52   10.5   4.6    2.4  2  PF00435.16 Spectrin repeat
        2.4    7.5   7.8       0.89    8.9   1.2    2.3  2  PF07352.7  Bacteriophage Mu Gam like protein
        2.4    6.9   7.2        2.5    6.8   0.7    2.1  2  PF05559.6  Protein of unknown function (DUF763)
        2.8    7.8   9.4        2.9    7.7   1.7    2.1  2  PF07956.6  Protein of Unknown function (DUF1690)


Domain annotation for each model (and alignments):
>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.3   2.6e-05     0.028      70     161 ..      59     145 ..      21     151 .] 0.76

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.6e-05
                 EEEEEE---HHBCCTCSHHHHHHHHHHHHHHHHHHHHHS--TTSHGGHCTBCTHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHH CS
  PF01636.18  70 lfalleyvpgevlerklnarqlpallealaellaalhqadpaadpladflapyltllrllesataalvasellelleeleervlaalaallp 161
                 ++a+l++++g++++     + ++++++ lae +  + + ++a d+    ++ ++++    ++a++a++a e +  + ++ +++  +l+++++
  MMETSP1325-20131115|4338_1  59 VTAVLTSIEGRTISA----NAQGEVVDLLAEQQTTIARSHKAIDARIASHKARMNQIEEAANAKLAQLAEEEQA-RVAAGRAAVLELLQQRH 145
                 7899**********9....89******************98877777777788888888888877888877777.33333332222222222 PP

>> PF03310.8  Caulimovirus DNA-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       1.8   1.9e+03      21      24 ..      34      37 ..      10      64 .. 0.53
   2 ?   13.3   0.4   4.8e-05     0.051       5      69 ..      76     143 ..      72     148 .. 0.68

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 1.8
                HHHH CS
   PF03310.8 21 eika 24
                +i++
  MMETSP1325-20131115|4338_1 34 KIDK 37
                2222 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 4.8e-05
                 HHHHHHHH.HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHC..-TTHHHHHHH--- CS
   PF03310.8   5 aseieevl.sdqkkieaeikaileklgstkpekesleevaakiikdltkkide..cecnkeiveildk 69 
                 + e+ ++l ++q++i+   kai ++++s+k   +++ee+a   +  l+++ +         ++e+l++
  MMETSP1325-20131115|4338_1  76 QGEVVDLLaEQQTTIARSHKAIDARIASHKARMNQIEEAANAKLAQLAEEEQArvAAGRAAVLELLQQ 143
                 566665551667889999********************997666777665332112333455666665 PP

>> PF00698.16  Acyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.3   5.8e-05     0.061     144     222 ..      54     135 ..      19     147 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.8e-05
                 .....---EEE-.-----TT--HHHHHHHHHH-----..----EEEEEEETTTEEEEE--HHHHHHHH.HHHHHHHHTT--H CS
  PF00698.16 144 wddrvvvaivns.pssvvvsgseealrelvervekeg.vralveavdyavhspqveaiadalalelak.iaprkpkvpkist 222
                  +  vv a+  s ++++ ++  + ++ +l+++ ++      +++++++a+h + +++i++a  ++la+   +++++v+   +
  MMETSP1325-20131115|4338_1  54 DRAAVVTAVLTSiEGRTISANAQGEVVDLLAEQQTTIaRSHKAIDARIASHKARMNQIEEAANAKLAQlAEEEQARVAAGRA 135
                 5556777776654677777777777777777666555488999*************************55566777776555 PP

>> PF11365.3  Protein of unknown function (DUF3166)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.3   5.1e-05     0.054       3      40 ..       3      40 ..       2      68 .. 0.89
   2 ?    0.4   0.2      0.79   8.3e+02      23      23 ..     118     118 ..      74     147 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.1e-05
   PF11365.3  3 sadLrcqLqfvkeEaaLlrkklaklekEkdkveeELqk 40
                s+dL+ qL +vke  + +r k +++  E ++  + Lq 
  MMETSP1325-20131115|4338_1  3 SDDLQNQLALVKEGDEKVRSKTTEVRDEAKRKIDKLQE 40
                689*************************9998777774 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.79
   PF11365.3  23 k 23 
                 k
  MMETSP1325-20131115|4338_1 118 K 118
                 2 PP

>> PF05823.7  Nematode fatty acid retinoid binding protein (Gp-FAR-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.6   0.00056      0.59      43      78 ..       7      42 ..       4      56 .. 0.88
   2 ?    6.7   0.4    0.0053       5.6      47      97 ..      95     145 ..      67     149 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00056
   PF05823.7 43 dellaalKekspsLyekaeklrellkkKidaLseea 78
                ++ la +Ke  ++  +k  ++r+  k+Kid+L+ee+
  MMETSP1325-20131115|4338_1  7 QNQLALVKEGDEKVRSKTTEVRDEAKRKIDKLQEES 42
                5668899*************************9987 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0053
   PF05823.7  47 aalKekspsLyekaeklrellkkKidaLseeakafvkkviakgrklraqll 97 
                 +a+ ++  s  +++++++e+  +K+++L ee +a v    a++ +l +q++
  MMETSP1325-20131115|4338_1  95 KAIDARIASHKARMNQIEEAANAKLAQLAEEEQARVAAGRAAVLELLQQRH 145
                 567777778899**********************99999999999888876 PP

>> PF12998.2  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.6   0.00011      0.12      13      58 ..       2      48 ..       1      57 [. 0.84
   2 ?    2.2   0.1      0.18   1.9e+02      25      46 ..      95     119 ..      72     148 .. 0.54

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00011
   PF12998.2 13 LPlelqrnltelreiDakvqkrlkelderiekfikengskkltke.k 58
                L ++lq +l +++e D kv++++ e+++++++ i++ +++++++  +
  MMETSP1325-20131115|4338_1  2 LSDDLQNQLALVKEGDEKVRSKTTEVRDEAKRKIDKLQEESMQEAvE 48
                889****************************9999987766665543 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.18
   PF12998.2  25 reiDak...vqkrlkelderiekfi 46 
                 ++iDa+    + r+++++e ++  +
  MMETSP1325-20131115|4338_1  95 KAIDARiasHKARMNQIEEAANAKL 119
                 2333333333333333333333333 PP

>> PF11803.3  UDP-glucuronate decarboxylase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.5    0.0014       1.4      41      74 ..      11      43 ..       6      46 .. 0.88
   2 ?    0.5   0.0      0.44   4.7e+02      37      57 ..     105     125 ..      79     132 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0014
   PF11803.3 41 rsIqEnGevKieqkieeavaplrekirdleksfv 74
                + ++E G+ K+ +k  e+    + ki +l++  +
  MMETSP1325-20131115|4338_1 11 ALVKE-GDEKVRSKTTEVRDEAKRKIDKLQEESM 43
                56888.***********************98765 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.44
   PF11803.3  37 yvnmrsIqEnGevKieqkiee 57 
                  + m+ I E  + K+ q  ee
  MMETSP1325-20131115|4338_1 105 KARMNQIEEAANAKLAQLAEE 125
                 456778888888888776665 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   6.1   0.00073      0.77      50     165 ..       5     130 ..       2     134 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00073
   PF03234.9  50 elekelkinkkllervdkllselkeeeelssekvlkklneeadkedka.............sveeeeeeqpkynemledLldqvkdevdekkaaklieelkkhrkklkkeekelekkleelekeekkki 165
                 +l+ +l+  k+  e+v+++ +e+++e++ + +k+ + + +ea ++                ++ e  +  ++ +  + dLl + ++ + +++++++  ++ +h++++++ e+ ++ kl++l +ee++++
  MMETSP1325-20131115|4338_1   5 DLQNQLALVKEGDEKVRSKTTEVRDEAKRKIDKLQEESMQEAVEK--KgpsdraavvtavlTSIEGRTISANAQGEVVDLLAEQQT-TIARSHKAIDARIASHKARMNQIEEAANAKLAQLAEEEQARV 130
                 566666666666677777777777776555555544433333222..122455688875432222222233333444455544333.33446889999**************************99876 PP

>> PF01503.12  Phosphoribosyl-ATP pyrophosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.3    0.0089       9.4      12      54 ..      20      62 ..      12      65 .. 0.81
   2 ?    5.3   0.4      0.02        21       5      40 ..      94     132 ..      90     148 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0089
                --SS-----CCHHHHHHHHHHHHHHHHHHHT-SSHHHHHHHHH CS
  PF01503.12 12 keetpeasdpelaalraallvEElvElleAasqgdlveladal 54
                  ++ +   +e+++++++l +E ++E +e   ++d++ ++ a+
  MMETSP1325-20131115|4338_1 20 VRSKTTEVRDEAKRKIDKLQEESMQEAVEKKGPSDRAAVVTAV 62
                455556667888888999999999******9999999999886 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.02
                 HHHTT----SS----.-CCHHHH..HHHHHHHHHHHHHH CS
  PF01503.12   5 hrtfdlrkeetpeas.dpelaal..raallvEElvElle 40 
                 h+++d+r+++    + ++e+aa+   a+l++EE + +++
  MMETSP1325-20131115|4338_1  94 HKAIDARIASHKARMnQIEEAANakLAQLAEEEQARVAA 132
                 8899999988555554666665555999**9*9876665 PP

>> PF00435.16  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   1.3     0.034        36      26      77 ..       3      57 ..       1      70 [. 0.83
   2 ?   10.5   4.6   0.00049      0.52      39     104 ..      89     149 ..      61     150 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.034
                CCCHSSSHHHHHHHHHHHHHHHHHHHH.HHHHHHHHH..HHHHHHHHTTSTTHHH CS
  PF00435.16 26 sedlgkdleevqallkkhkaleaelaa.qqervealn..elaeklideghsasee 77
                s+dl ++l+ v++  +k +    e+++ +++++++l+   ++e+++++g+s+  +
  MMETSP1325-20131115|4338_1  3 SDDLQNQLALVKEGDEKVRSKTTEVRDeAKRKIDKLQeeSMQEAVEKKGPSDRAA 57
                7888899999999999**********9999*******877888888888777655 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00049
                 HHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00435.16  39 llk.khkaleaelaaqqervealnelaeklideghsaseeieerleelnerWeeLlelaaerkqkLe 104
                  +   hka+ a +a+++ r+++++e a++ ++         ee ++ +    +++lel+++r+++L+
  MMETSP1325-20131115|4338_1  89 TIArSHKAIDARIASHKARMNQIEEAANAKLAQ------LAEEEQARVAAGRAAVLELLQQRHEALR 149
                 33359*******************877766443......4666667778899999999999999886 PP

>> PF07352.7  Bacteriophage Mu Gam like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.3     0.086        90      18      40 ..      23      45 ..       3      62 .. 0.55
   2 ?    8.9   1.2   0.00085      0.89      11      43 ..     100     132 ..      73     149 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.086
   PF07352.7 18 eieeieeeandeiarieekykae 40
                + +e + ea+++i++++e+  +e
  MMETSP1325-20131115|4338_1 23 KTTEVRDEAKRKIDKLQEESMQE 45
                33344444444444444444433 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00085
   PF07352.7  11 kigelkreieeieeeandeiarieekykaelep 43 
                 +i+ +k  +++iee an++ a++ e+++a +++
  MMETSP1325-20131115|4338_1 100 RIASHKARMNQIEEAANAKLAQLAEEEQARVAA 132
                 799999999999999999999999999998854 PP

>> PF05559.6  Protein of unknown function (DUF763)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.5     0.015        16     207     252 ..       8      55 ..       3      72 .. 0.66
   2 ?    6.8   0.7    0.0024       2.5     201     253 ..      72     124 ..      60     147 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.015
   PF05559.6 207 livdlvregpskivreveelkeklkg..eelelkekhevreedvklkr 252
                  +++lv+eg +k++++++e+++++k    +l++++++e  e++   +r
  MMETSP1325-20131115|4338_1   8 NQLALVKEGDEKVRSKTTEVRDEAKRkiDKLQEESMQEAVEKKGPSDR 55 
                 568899999999999999988887764445555555555555554444 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0024
   PF05559.6 201 seearklivdlvregpskivreveelkeklkgeelelkekhevreedvklkrl 253
                 s++a+  +vdl+ e++++i+r+ +++++ ++ +++++++ +e  + ++ +  +
  MMETSP1325-20131115|4338_1  72 SANAQGEVVDLLAEQQTTIARSHKAIDARIASHKARMNQIEEAANAKLAQLAE 124
                 6788999*******************999998777777777776666544333 PP

>> PF07956.6  Protein of Unknown function (DUF1690)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.7    0.0027       2.9      37      69 ..      17      50 ..       3      70 .. 0.80
   2 ?    4.7   0.4     0.023        24      72     121 ..      89     142 ..      63     148 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0027
   PF07956.6 37 qkkvserlkqlevetlkkfeetlnssllsd.ddk 69
                ++kv ++  + + e+++k+++ +++s+++  ++k
  MMETSP1325-20131115|4338_1 17 DEKVRSKTTEVRDEAKRKIDKLQEESMQEAvEKK 50
                79*************************9865443 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.023
   PF07956.6  72 edelsssklneklesLkekLeefkkleekkkkkkldeveda.....rselvkCLl 121
                   + s ++++++++s k+++++ ++ +++k+++ l e e+a     r+ +++ L+
  MMETSP1325-20131115|4338_1  89 TIARSHKAIDARIASHKARMNQIEEAANAKLAQ-LAEEEQArvaagRAAVLELLQ 142
                 444467788888888888888444444444444.222222223334777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1717  (0.125585); expected 273.4 (0.02)
Passed bias filter:                      771  (0.0563926); expected 273.4 (0.02)
Passed Vit filter:                        89  (0.00650965); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.58u 0.47s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 723.70
//
Query:       MMETSP1325-20131115|4336_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|4339_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-39  133.9   0.0      6e-39  133.3   0.0    1.2  1  PF00326.16 Prolyl oligopeptidase family


Domain annotation for each model (and alignments):
>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.3   0.0   4.4e-43     6e-39       6     211 ..      31     261 ..      26     263 .. 0.89

  Alignments for each domain:
  == domain 1    score: 133.3 bits;  conditional E-value: 4.4e-43
                 HHHHHHH----EEEE----------TTT----GGGGHHHHHHHHHHHHHHHH-----GGGEEE--------HHHHHHH..H-GGG---EEEE-----TTTGGGS-..---GGGGT---TTSHHH.HHHHHHH-GGG---.....................----EEEEEETT-SSS-THHHHHHHHHHH........--SEEEEEES---------HHHH.HHHHHHHHHHHHHHT CS
  PF00326.16   6 elqlladrGyvvvvanirGsggyGekwhdagkrklgqnefdDfiaaaealakegyvdpdrlaitGgSyGGylvgaaln..qrpdlFkaavaqvgvvdwltymsdtsllteaeymeygnpeeneegyeelspyspadnvk.....................aypplllihGeeDdrvppaealklvaaLq......kagknvlllifpdegHgigkprakv.eelarllaFllkalg 211
                  +++l +rG+v v+anirG+g+yG +wh+a  + ++ ++++D+ a+a+ l+++++ +p +la+ GgS+GG+lvg  ++    ++lF +av+qv+ +d+  + +   l +++++ eyg+p+ +e  +  l   sp++ ++                     + p++l+++++ Ddrv+p +a k+v+aLq       +  +v +  +++ gHg++ +++++ +  a +++Fl ++lg
  MMETSP1325-20131115|4339_1  31 GAAWL-ERGGVKVIANIRGGGEYGPAWHQAALKANRYKCYEDMEAVAQDLIDRKISSPPKLACIGGSNGGLLVGNLITrpLSSKLFGCAVCQVPLLDMKVFNKL--LAGASWVAEYGDPDTDEWTF--LRRHSPYHLLRhdnlglpeeggselvnvnsdwVCPKVLFTTSTRDDRVHPGHARKMVRALQveakpvGKAPDVWYWENTEGGHGGAADNKQRaHMWALTYEFLGQHLG 261
                 57899.************************************************************************66678******************888..49999********7755444..5555555555455699***************999****************************99965445558899999****9999999999*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.52
# Mc/sec: 1451.64
//
Query:       MMETSP1325-20131115|4340_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 564.48
//
Query:       MMETSP1325-20131115|4341_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 1155.04
//
Query:       MMETSP1325-20131115|4344_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0056   16.2   0.0     0.0099   15.4   0.0    1.4  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   7.2e-07    0.0099       5      36 ..     143     174 ..     140     196 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 7.2e-07
                 HTT--TT--HHHHHHHHHHHHHHT-TTT--SC CS
  PF00226.26   5 iLgvpkdasdeeIkkaYrklalkyHPDknkdd 36 
                 i gv + a  +e +ka +k+ l++HPDk+ ++
  MMETSP1325-20131115|4344_1 143 IVGVAPAAGRSEKRKALKKYLLRWHPDKFMQK 174
                 77999999999*****************9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.65
# Mc/sec: 833.19
//
Query:       MMETSP1325-20131115|4342_1  [L=430]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-55  186.9   0.7    2.7e-55  186.4   0.5    1.2  1  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
    2.9e-16   58.8   0.0    5.7e-16   57.9   0.0    1.5  1  PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
      0.002   17.5   0.4       0.27   10.5   0.0    2.2  2  PF00009.22 Elongation factor Tu GTP binding domain
     0.0071   16.6   0.1      0.025   14.8   0.0    1.9  2  PF13191.1  AAA ATPase domain
     0.0073   15.9   0.2      0.023   14.2   0.0    2.0  2  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
  ------ inclusion threshold ------
      0.011   15.5   0.1      0.034   14.0   0.1    1.8  1  PF01926.18 50S ribosome-binding GTPase
      0.014   14.8   0.1      0.067   12.6   0.1    2.0  2  PF13555.1  P-loop containing region of AAA domain
      0.014   14.9   0.0      0.029   13.9   0.0    1.5  1  PF01637.13 Archaeal ATPase
      0.017   14.9   0.2      0.089   12.6   0.0    2.2  2  PF13521.1  AAA domain
      0.021   14.8   0.0      0.041   13.9   0.0    1.5  1  PF13401.1  AAA domain
      0.034   14.3   1.3      0.071   13.3   0.0    2.1  3  PF13238.1  AAA domain
      0.038   13.7   0.1       0.11   12.2   0.0    1.8  2  PF13173.1  AAA domain
      0.039   13.5   0.3      0.087   12.4   0.2    1.5  1  PF13245.1  Part of AAA domain
      0.053   12.6   0.0       0.12   11.4   0.0    1.6  1  PF12846.2  AAA-like domain
      0.058   13.6   1.3        0.2   11.8   0.8    1.8  1  PF13476.1  AAA domain
      0.068   11.9   0.0       0.12   11.1   0.0    1.3  1  PF00437.15 Type II/IV secretion system protein
       0.12   11.8   0.1       0.26   10.7   0.1    1.5  1  PF05729.7  NACHT domain


Domain annotation for each model (and alignments):
>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.4   0.5   3.4e-58   2.7e-55       1     177 [.      19     214 ..      19     215 .. 0.93

  Alignments for each domain:
  == domain 1    score: 186.4 bits;  conditional E-value: 3.4e-58
                 EEEEEE-------HHHHHHHHCHS---S-EEEEES-----HCCCCCHHT-S-......EEEE----ECC-TTS-HHHHHCCCHHHCH......-T-SEEEEE----SGGGGH..HHH.SHHHHHHEEE-EEEEEEETTTH......CHHHHHHHHHHHHHCT-SEEEEE-CCCTTTT..HHHHHHHHHHH-TTSEEE CS
  PF02492.14   1 pvtvltGflGsGKTtLleklleknreglkiaVivndfgetkiDaellretgve.....ivelnnGciCctlredllmelealeelke......erldvlliEttGlaepapl..tft.eeelksdlgldavvtvvdvknl......tegedkpekledqlaaAdlivlnKiDlldaeadlekleedlrklnpeakvl 177
                 pvtvltGflGsGKTtLl+++l + ++g +ia+i+n+fge++iD +llr++ +e     ++e+ nGc+Cct+r+dl+ +l++l+++++       +ld+++iEttG+a+pap+  tf  +ee+++ ++ld++vt+vd+k++      ++ e  +++  +q+a+Ad i+lnKiDl+++e dl ++ee+l+++n+ a+++
  MMETSP1325-20131115|4342_1  19 PVTVLTGFLGSGKTTLLNHIL-TAKHGWRIAIIENEFGEVGIDDALLRKNVKEhteeeVIEMLNGCVCCTVRDDLIVTLKKLVSNSSvmkpggYKLDAVVIETTGMADPAPVaqTFFvDEEVQTYFKLDGIVTLVDAKHIeqhldeEKPEGAENESVEQVAFADRIILNKIDLVPEESDLVRIEERLKSINSFAQII 214
                 79*******************.889**********************88733334556****************************888888899*****************775557************************99887788899999*********************999*************9998 PP

>> PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0     7e-19   5.7e-16       2      93 ..     258     350 ..     257     351 .. 0.92

  Alignments for each domain:
  == domain 1    score: 57.9 bits;  conditional E-value: 7e-19
   PF07683.9   2 ssfvfrarrpfdperleallee....lpegvlRaKGivwlagkpdalvlqgvggrlrlepagawwaaledgdrrseLVfIGrdldkealeeaLdac 93 
                 ss  ++ ++++d +++++++++    ++++++R+KG++ ++g pd++v q+v++ ++ + ++++w++   ++r  +L fIG+++dkeal++++ +c
  MMETSP1325-20131115|4342_1 258 SSTGVNVPGEVDMSAFQDYMSTilreQGNDMFRMKGVLAVEGVPDKFVYQAVHMIFNSN-FDEAWKE--GEERCCRLTFIGKNIDKEALRNGFLEC 350
                 6777788899999999999999999899*******************************.7777777..7************************99 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.013        10       7      28 ..      22      43 ..      16      74 .. 0.80
   2 !   10.5   0.0   0.00033      0.27      83     147 ..     134     205 ..     131     320 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.013
                EEEESTT---HHHHHHHHHHCC CS
  PF00009.22  7 giighvDhGKtTltdallykag 28
                ++ g + +GKtTl++++l++ +
  MMETSP1325-20131115|4342_1 22 VLTGFLGSGKTTLLNHILTAKH 43
                56677789*********98776 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00033
                 GHHHHHHHHHT-SEEEEEEETTS-S-HHHHHHHHHHHHTT--EEE.....EEE-TTST..CHHHHHHHHHHH CS
  PF00009.22  83 FskevirglrvlDgavlvvdaveGvepqTeevlrlakklgvkiiv.....viNKiDrv..eaeleeiveelk 147
                 F++e  ++   lDg v +vda++  +   ee  + a+++ v+ +      ++NKiD+v  e++l +i e lk
  MMETSP1325-20131115|4342_1 134 FVDEEVQTYFKLDGIVTLVDAKHIEQHLDEEKPEGAENESVEQVAfadriILNKIDLVpeESDLVRIEERLK 205
                 78888899999***********999999999999999999995542333379******77555555555544 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.1e-05     0.025      14      45 ..       3      40 ..       1      72 [. 0.80
   2 ?   -1.3   0.0       2.8   2.2e+03      99     129 ..     177     218 ..     136     247 .. 0.61

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.1e-05
   PF13191.1 14 aalrrvsegsp......lllvtGpsGiGKSsLlrelak 45
                aa+++ ++g++      + ++tG  G+GK++Ll+++++
  MMETSP1325-20131115|4342_1  3 AAIEETTAGGSadaripVTVLTGFLGSGKTTLLNHILT 40
                67777777777788888999***************664 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 2.8
   PF13191.1  99 aalga...........lipelegiiglqalvalldaalartr 129
                  a ++            +++l +i++    ++   ++++ tr
  MMETSP1325-20131115|4342_1 177 VAFADriilnkidlvpEESDLVRIEERLKSINSFAQIIRSTR 218
                 444444444444444444444444444444444444444444 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   2.9e-05     0.023       1      45 [.      19      60 ..      19      62 .. 0.83
   2 ?   -2.5   0.0       4.3   3.4e+03      32      58 ..      94     117 ..      87     165 .. 0.62

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2.9e-05
                -EEEEE-------HHHHHHHHHHHHH-------EEE-SS.-TTSS CS
   PF03205.9  1 pivavvGpkdsGKTtlieklvnklkergyrvavvkhldhGqgeid 45
                p+ +++G+ +sGKTtl+ +++    + g+r+a + + + G+ +id
  MMETSP1325-20131115|4342_1 19 PVTVLTGFLGSGKTTLLNHIL--TAKHGWRIA-IIENEFGEVGID 60
                567889**************5..4568*****.778888887776 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 4.3
                 --EEE-SS.-TTSS----TTHHHH--- CS
   PF03205.9  32 avvkhldhGqgeidkpGkDtwrlkaga 58 
                 +++k l + ++++ kpG   ++l a+ 
  MMETSP1325-20131115|4342_1  94 VTLKKLVS-NSSVMKPGG--YKLDAVV 117
                 45666767.777777777..6664432 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   4.2e-05     0.034       3      90 ..      22     160 ..      20     196 .. 0.58

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 4.2e-05
                 EEE--TT---HHHHHHHHCST....CTE......................................ETS-TT-SSSESEEEE..................ETTE.....EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS...H CS
  PF01926.18   3 aivGrpNvGKStLinaLtgek....aak......................................vsdypgtTrditenev..................kkek.....iilvDtPGiiegasedkeiegikkylekveradvlllvvdasa...v 90 
                 ++ G   +GK+tL+n ++ +k    +a+                                      v                                 +         +++ t G++++a+ ++   ++++  +   ++d+++ +vda++   +
  MMETSP1325-20131115|4342_1  22 VLTGFLGSGKTTLLNHILTAKhgwrIAIienefgevgiddallrknvkehteeeviemlngcvcctV--------------RddlivtlkklvsnssvmkP--GgykldAVVIETTGMADPAPVAQT-FFVDEEVQTYFKLDGIVTLVDAKHieqH 160
                 688999***********95433333333666666677777777444444444444444444444433..............04444433333332234431..033344489999999998888874.3566666666777999999998874331 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   8.3e-05     0.067      24      44 ..      19      39 ..       8      46 .. 0.81
   2 ?   -1.8   0.0       2.6   2.1e+03       5      21 ..     225     242 ..     222     245 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 8.3e-05
   PF13555.1 24 kntlltGasGsGKSTllDAiq 44
                 +t+ltG  GsGK+Tll  i 
  MMETSP1325-20131115|4342_1 19 PVTVLTGFLGSGKTTLLNHIL 39
                479*************96554 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 2.6
   PF13555.1   5 qlvNWgtfdg.htveidp 21 
                 +++N g+fd  +t+e+dp
  MMETSP1325-20131115|4342_1 225 NVLNLGSFDLkRTLEMDP 242
                 68899****999999987 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.5e-05     0.029      21      49 ..      19      47 ..      13     105 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.5e-05
                SEEEEE--TT---HHHHHHHHHH-..--- CS
  PF01637.13 21 siiviyGprrsGKTaLlkeileelkekgk 49
                +++v+ G  +sGKT+Ll++il  +  + +
  MMETSP1325-20131115|4342_1 19 PVTVLTGFLGSGKTTLLNHILTAKHGWRI 47
                689******************99977765 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00011     0.089       3      39 ..      22      63 ..      20      85 .. 0.72
   2 ?   -1.4   0.0       2.1   1.7e+03      51      83 ..     153     185 ..     134     188 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00011
   PF13521.1  3 vitGgpstGKTtlleaL..aargypvv...pEvarevleekl 39
                v+tG  ++GKTtll+++  a++g++++    E++   ++++l
  MMETSP1325-20131115|4342_1 22 VLTGFLGSGKTTLLNHIltAKHGWRIAiieNEFGEVGIDDAL 63
                899*************95447899955457888877777766 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 2.1
   PF13521.1  51 dllafaeavleaqleqeaaaaaskllfcDrgll 83 
                 d+ ++++++ e++ e +++++ +++ f Dr +l
  MMETSP1325-20131115|4342_1 153 DAKHIEQHLDEEKPEGAENESVEQVAFADRIIL 185
                 666777887777778888888899999999776 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     5e-05     0.041       6      35 ..      20      49 ..      16     119 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 5e-05
   PF13401.1  6 ilvvtGesGvGKTtllrrlarqldeeaeaa 35
                ++v+tG  G+GKTtll++++  ++ + +a 
  MMETSP1325-20131115|4342_1 20 VTVLTGFLGSGKTTLLNHILTAKHGWRIAI 49
                589*****************9988776654 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   8.8e-05     0.071       2      42 ..      22      74 ..      22     104 .. 0.75
   2 ?   -2.4   0.0       6.2     5e+03      48      48 ..     173     173 ..     138     216 .. 0.51
   3 ?   -2.7   0.0       7.8   6.3e+03     100     110 ..     352     362 ..     320     367 .. 0.69

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8.8e-05
   PF13238.1  2 litGtpGvGKtTlakeL..aerl..........gdvlrdlakengleeevddk 42
                ++tG  G+GKtTl++ +  a+++          g+v +d a  +  ++e++++
  MMETSP1325-20131115|4342_1 22 VLTGFLGSGKTTLLNHIltAKHGwriaiienefGEVGIDDALLRKNVKEHTEE 74
                59**************9877766776667677766655555555555555554 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 6.2
   PF13238.1  48 s 48 
                 s
  MMETSP1325-20131115|4342_1 173 S 173
                 1 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 7.8
   PF13238.1 100 adpeelarRle 110
                 a+pe l++R++
  MMETSP1325-20131115|4342_1 352 ATPENLQKRIK 362
                 56677777766 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00014      0.11       3      42 ..      19      64 ..      17      87 .. 0.68
   2 ?   -2.4   0.0       4.5   3.6e+03      50      57 ..     180     187 ..     133     234 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00014
   PF13173.1  3 kilvitGpRrvGKttllkqlakell......keesilyinlddeel 42
                +++v+tG  ++GKttll++++  +        e+++ ++  dd+ l
  MMETSP1325-20131115|4342_1 19 PVTVLTGFLGSGKTTLLNHILTAKHgwriaiIENEFGEVGIDDALL 64
                589****************986666555555445555555555444 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 4.5
   PF13173.1  50 llelflek 57 
                  ++++l+k
  MMETSP1325-20131115|4342_1 180 ADRIILNK 187
                 22333333 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   0.00011     0.087      10      32 ..      18      39 ..      11      50 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00011
   PF13245.1 10 npllvvtGgPGtGKTttlaaiia 32
                 p++v+tG  G+GKT tl++ i 
  MMETSP1325-20131115|4342_1 18 IPVTVLTGFLGSGKT-TLLNHIL 39
                589************.7766554 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00015      0.12       2      23 ..      19      40 ..      19      53 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00015
   PF12846.2  2 pntlilGppGsGKSvllkklvl 23
                p t+++G +GsGK++ll++++ 
  MMETSP1325-20131115|4342_1 19 PVTVLTGFLGSGKTTLLNHILT 40
                57899**************976 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.8   0.00024       0.2      20      68 ..      19      70 ..      17     239 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00024
   PF13476.1 20 gltlItGpNGsGKTTildAiclaL.ygktsrlkksrgrgilkddveiek...e 68
                ++t++tG  GsGKTT+l+ i  a  +++++ ++++ g ++++dd  ++k   e
  MMETSP1325-20131115|4342_1 19 PVTVLTGFLGSGKTTLLNHILTAKhGWRIAIIENEFG-EVGIDDALLRKnvkE 70
                689*****************99986788888888755.666666666663322 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00015      0.12     132     164 ..      22      52 ..      15      76 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00015
  PF00437.15 132 lvsGgTgsGKttllnallaeinkdderivtiED 164
                 +++G  gsGKttlln +l+  +    ri +iE 
  MMETSP1325-20131115|4342_1  22 VLTGFLGSGKTTLLNHILTAKH--GWRIAIIEN 52 
                 789**************98644..458888885 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00032      0.26       3      23 ..      21      41 ..      19      48 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00032
   PF05729.7  3 vilqGeaGsGKTtLlqklasa 23
                 +l+G  GsGKTtLl ++ +a
  MMETSP1325-20131115|4342_1 21 TVLTGFLGSGKTTLLNHILTA 41
                68999*************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       402  (0.0294032); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.79u 0.36s 00:00:01.14 Elapsed: 00:00:00.55
# Mc/sec: 1873.52
//
Query:       MMETSP1325-20131115|4345_1  [L=312]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-08   34.6   0.0    2.3e-08   33.9   0.0    1.4  1  PF13508.1  Acetyltransferase (GNAT) domain
    3.7e-08   33.1   0.0    8.4e-08   32.0   0.0    1.6  2  PF00583.19 Acetyltransferase (GNAT) family
    0.00043   20.0   0.0    0.00098   18.8   0.0    1.6  1  PF13527.1  Acetyltransferase (GNAT) domain
     0.0014   18.6   0.0     0.0031   17.4   0.0    1.6  1  PF13673.1  Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.027   14.1   0.0      0.047   13.3   0.0    1.4  1  PF08445.5  FR47-like protein


Domain annotation for each model (and alignments):
>> PF13508.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   8.6e-12   2.3e-08      22      77 ..     215     273 ..     179     275 .. 0.85

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 8.6e-12
   PF13508.1  22 edgetayiggvavdpeyrgkGlGskllnklkeey..gekpivllar.parkkFYeklGF 77 
                   ge++y+  +av+p+++gkG  s+l++ +++ +  ++ p++l+a  ++ +++Y +lG+
  MMETSP1325-20131115|4345_1 215 APGEHVYVAVMAVHPDFQGKGACSRLMRTVERAAdnKQLPCYLEASgERNVAIYSHLGY 273
                 568999************************99993344579***9835678*******9 PP

>> PF00583.19  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0         3   8.3e+03      23      36 ..     140     153 ..     125     155 .. 0.67
   2 !   32.0   0.0   3.1e-11   8.4e-08      22      82 ..     215     273 ..     192     274 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 3
                 TTEEEEEEEEESGG CS
  PF00583.19  23 ertayieglaVspe 36 
                 + +++++ + Vs++
  MMETSP1325-20131115|4345_1 140 GENGELHAVLVSRR 153
                 47888999988875 PP

  == domain 2    score: 32.0 bits;  conditional E-value: 3.1e-11
                 S.TTEEEEEEEEESGGGTTTT-HHHHHHHHHHHHHHTTHSEEEEEEETTCHHHHHHHHHTT- CS
  PF00583.19  22 a.ertayieglaVspeyrgqGiGkaLleallekarerglerielevesgndraiklYeklGF 82 
                 a + ++y+  +aV+p+++g+G  ++L++++++ a +   + + ++ e + +r ++ Y +lG+
  MMETSP1325-20131115|4345_1 215 ApGEHVYVAVMAVHPDFQGKGACSRLMRTVERAADN---KQLPCYLEASGERNVAIYSHLGY 273
                 2579********************************...99999999999999999999998 PP

>> PF13527.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   3.6e-07   0.00098      75     126 ..     221     274 ..     206     275 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 3.6e-07
   PF13527.1  75 gvtgVatapehrgrgllrkLlarlleemrergqplsilfP...ssypiYrrfGye 126
                 +v+ +a++p+ +g+g+ ++L++++ e++++++q   +l +   ++++iY ++Gy+
  MMETSP1325-20131115|4345_1 221 YVAVMAVHPDFQGKGACSRLMRTV-ERAADNKQLPCYLEAsgeRNVAIYSHLGYD 274
                 78899****************986.556668999999999787788********6 PP

>> PF13673.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.1e-06    0.0031      63     117 .]     216     273 ..     206     273 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.1e-06
   PF13673.1  63 pdas..lsllyvrpeargrGigraLldaieaeark.gikvltte.asklarplyerlGf 117
                 p+++  ++  +v+p+++g+G+++ L++++e++a+   +++ ++e +  +  ++y +lG+
  MMETSP1325-20131115|4345_1 216 PGEHvyVAVMAVHPDFQGKGACSRLMRTVERAADNkQLPC-YLEaSGERNVAIYSHLGY 273
                 56664466689*********************95548887.788466667999999998 PP

>> PF08445.5  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.7e-05     0.047      22      80 ..     220     276 ..     203     280 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.7e-05
                 ------EE-GGG--------HHHHHHHHHH---S-EEEEEETT-HHHHHHHHH---B-- CS
   PF08445.5  22 gelgalqvlpehrrrGlgsrlvkalakeiaergktvllvvvasNtpsirlyeklGfeki 80 
                  ++  + v+p+++++G  srl + + ++  + +k++  +  as ++  ++y+ lG+   
  MMETSP1325-20131115|4345_1 220 VYVAVMAVHPDFQGKGACSRLMRTVERA--ADNKQLPCYLEASGERNVAIYSHLGYDSK 276
                 5677899*****************9985..677788899999999**********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       573  (0.0419105); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.47
# Mc/sec: 1590.77
//
Query:       MMETSP1325-20131115|4337_1  [L=1390]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-36  122.9   0.0    7.6e-17   61.6   0.0    2.6  2  PF00005.22 ABC transporter
    1.6e-24   87.2   0.0    4.2e-10   39.9   0.0    4.2  4  PF13304.1  AAA domain
    2.2e-17   62.9  31.7      4e-09   35.8   3.4    2.3  2  PF12698.2  ABC-2 family transporter protein
    6.5e-08   33.0   3.9    0.00035   20.8   0.4    2.3  2  PF13476.1  AAA domain
    3.4e-07   29.6   0.1       0.62    9.1   0.0    4.1  4  PF02463.14 RecF/RecN/SMC N terminal domain
    1.7e-06   27.3   2.6      0.015   14.7   0.0    3.2  3  PF13555.1  P-loop containing region of AAA domain
    2.7e-05   23.2   0.1      0.002   17.2   0.0    2.4  2  PF03193.11 Protein of unknown function, DUF258
    0.00011   21.5   0.5        4.5    6.5   0.1    4.0  4  PF01695.12 IstB-like ATP binding protein
     0.0017   17.8   1.5      0.053   13.0   0.1    2.5  2  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
     0.0021   17.8   0.2       0.41   10.4   0.0    3.5  2  PF13558.1  Putative exonuclease SbcCD, C subunit
     0.0041   15.8   1.6        0.1   11.2   0.1    2.1  2  PF03215.10 Rad17 cell cycle checkpoint protein
     0.0093   15.5   2.8          1    9.0   0.2    2.6  2  PF13245.1  Part of AAA domain
     0.0097   14.8   0.0        6.1    5.6   0.0    3.6  4  PF13175.1  AAA ATPase domain
  ------ inclusion threshold ------
       0.02   14.2   0.3       0.73    9.1   0.2    2.6  2  PF00009.22 Elongation factor Tu GTP binding domain
      0.027   14.5   0.0         12    6.0   0.0    2.7  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.033   14.0   0.0        1.8    8.4   0.0    2.5  2  PF01926.18 50S ribosome-binding GTPase
      0.041   13.2   4.5       0.43    9.8   0.0    2.3  2  PF00448.17 SRP54-type protein, GTPase domain
      0.042   12.8   0.2        1.2    8.0   0.0    2.2  2  PF06414.7  Zeta toxin
      0.049   13.8   5.3       0.36   11.0   0.0    3.0  2  PF13191.1  AAA ATPase domain
       0.06   12.6   0.2         13    4.9   0.0    2.5  2  PF13481.1  AAA domain
      0.073   12.1   1.1        3.3    6.7   0.1    2.9  3  PF12846.2  AAA-like domain
      0.077   12.9   2.2         12    5.8   0.0    3.0  3  PF13401.1  AAA domain
       0.14   11.2  27.0      0.057   12.4   9.1    3.2  3  PF01061.19 ABC-2 type transporter
       0.17   11.6   0.4         21    4.8   0.1    2.5  2  PF13671.1  AAA domain
       0.17   12.2   0.2         22    5.4   0.1    2.4  2  PF08477.8  Miro-like protein
       0.46    9.9   1.3         13    5.2   0.2    2.4  2  PF05729.7  NACHT domain
          1    7.7   2.7        3.8    5.8   0.1    2.5  3  PF09818.4  Predicted ATPase of the ABC class
        1.1    8.6   3.4        7.2    5.8   0.3    2.5  2  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
        1.8    7.9   2.7         34    3.8   0.1    2.8  3  PF13479.1  AAA domain
        4.2    5.5   3.3        7.9    4.6   0.2    2.3  2  PF13166.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.0   1.7e-19   7.6e-17       1     118 []     294     412 ..     294     412 .. 0.90
   2 !   58.8   0.0   1.3e-18   5.7e-16       1     117 [.    1078    1200 ..    1078    1201 .. 0.89

  Alignments for each domain:
  == domain 1    score: 61.6 bits;  conditional E-value: 1.7e-19
                 HHHHHHHTTSS------EEE-....--BGGGB-HHHHHEEEE-------.--BHHHHHH----S--...-HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievdn..drkdlesdkleklrigyipqdpllfpeltvrenldmakeekk...tdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 +TL++++tg++  t g+ ++ +  +r     ++ ++++++++pq+++  p+l+v+e l  +         +++i+ vle++g++++++  ++s+LSgGqk+r+  A +ll +++++ LDEPt+
  MMETSP1325-20131115|4337_1 294 TTLVNCITGMTGITGGDASILGfsCR---DAIEQCRWNLSVCPQENPMYPDLSVDEHLTLFAGLRGvvsPEDEITTVLEQLGMTAKRHA-KCSNLSGGQKRRLWVATCLLGDAPVVFLDEPTS 412
                 8******************9966666...334556667********************887666549999***************8888.*******************************96 PP

  == domain 2    score: 58.8 bits;  conditional E-value: 1.3e-18
                  HHHHHHHTTSS-.-----EEE-...--BGGGB-HHHHH.EEEE-------.--BHHHHHH----S--.....-HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTT CS
                  xxxxxxxxxxxx.xxxxxxxxx.xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22    1 STLlklltgelk.ptegeievd.ndrkdlesdkleklr.igyipqdpllfpeltvrenldmakeekk.....tdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPt 117 
                  +T l++ltgel+ pt+g++ +d +++ + e    ++ + +g++pq  +lfp l+ r+ l +  + k      + ++++++l+++g++++ +++ ++t+SgG+k++++lA al+  +++l+LDEP 
  MMETSP1325-20131115|4337_1 1078 TTTLACLTGELRpPTSGQVFIDgDEV-TGE-GMFRAYKkLGFCPQVDPLFPYLSGRNHLIFYGRLKGvpknaAAAEADRLLRRLGFNARDSEKTAETYSGGMKRKLSLAIALIGASDMLMLDEPS 1200
                  799*********899*******4444.333.33444446********************999888879********************99999*******************************7 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0028       1.3       2      24 ..     283     305 ..     282     338 .. 0.77
   2 !   39.9   0.0   9.2e-13   4.2e-10     235     298 ..     382     442 ..     359     446 .. 0.94
   3 !    8.0   0.0    0.0047       2.1       3      21 ..    1068    1086 ..    1066    1116 .. 0.74
   4 !   24.9   0.0   3.3e-08   1.5e-05     196     298 ..    1160    1230 ..    1134    1233 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0028
   PF13304.1   2 nviiGpNgsGKSnlLkaldflfr 24 
                  ++ G Ng+GK++l  ++ ++ +
  MMETSP1325-20131115|4337_1 283 FALLGHNGAGKTTLVNCITGMTG 305
                 5899**************99865 PP

  == domain 2    score: 39.9 bits;  conditional E-value: 9.2e-13
   PF13304.1 235 sdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHS 298
                 s+lS G+kr l  +t ll +    +v+++DEp +g++P+  r+l++ll + +++g +++fTTH 
  MMETSP1325-20131115|4337_1 382 SNLSGGQKRRLWVATCLLGDA---PVVFLDEPTSGMDPSSRRELWQLLLDMRDRGRTIVFTTHY 442
                 789******************...************************999999*********6 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.0047
   PF13304.1    3 viiGpNgsGKSnlLkaldf 21  
                  ++ GpNg+GK++ L +l +
  MMETSP1325-20131115|4337_1 1068 GLLGPNGAGKTTTLACLTG 1086
                  589*********9988865 PP

  == domain 4    score: 24.9 bits;  conditional E-value: 3.3e-08
   PF13304.1  196 eielsdlkkvlklsllidedllekdviflkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQl.ifTTHS 298 
                  +++ +d +k+ + +                            S G+kr l+l+ al+ a    ++l++DEp +  +  + r+l++++k       Q  ++TTHS
  MMETSP1325-20131115|4337_1 1160 GFNARDSEKTAETY----------------------------SGGMKRKLSLAIALIGAS---DMLMLDEPSAAVDVGAKRHLWKVIKGRGA--HQTvVLTTHS 1230
                  44444444444444............................******************...************************66666..4444*****9 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8  13.0   7.1e-11   3.2e-08     185     320 ..       1     135 [.       1     191 [. 0.83
   2 !   35.8   3.4   8.7e-12     4e-09     170     329 ..     711     908 ..     700     923 .. 0.71

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 7.1e-11
   PF12698.2 185 Ekesrikelqlvsgvspfaywlskilgdllvgliqlllilllafglegipfg.nlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfp.leslpsflkwifsiiPffslgdgllriitgd 320
                 Ekes++k +q+v gv+p+ ywl  ++  + +++  ++l+ ++++g+  i f+ + ll+++ ++l  + + a+g+++ ++ ++  +a ++++i+ l l ++ l+lf   ++lp  + ++f ++P + +++    ++++ 
  MMETSP1325-20131115|4337_1   1 EKESKMKMVQIVNGVPPWLYWLTYFFQFMCLAFCACILWTGVFLGT--IAFDcGPLLVFIPLILSHIQVFAIGVIVCAVANKMQDAVGMANIMQL-LALIPLVLFNlASKLPPGFVYLFGFVPCSGITLWTASVLFTS 135
                 9********************************************5..****************************************9999999.666666666647889999*****9999888888777777544 PP

  == domain 2    score: 35.8 bits;  conditional E-value: 8.7e-12
   PF12698.2 170 lifigaliialsiveEkesrikelqlvsgvspfaywlskilgdllvgliqlllilll...afglegipfgnlllllllfllfglayia.lgyllsslfksestaqlvisililllsgfflglfpleslp............sflkwifsiiPffslgdgllriitgdlse........................illsli 329
                 ++ ++++ +a+ + +E+ +++k+++++ g+sp++y+++ +l++++ + i+ ++  ++   + + ++++ g  +l++l+  +f+ + i+ lg  ls + ++e+++  v+s +++  +++ ++ +p++ l             ++l+ ifs+i  +++++g+   ++ d+++                        ++++++
  MMETSP1325-20131115|4337_1 711 AFCLPVIRFAVTLMRERVNKAKHVMIAQGLSPTSYIFGSLLFVVIQMTIIGAFVPIVewnLMQAANLTNGRDGLVWLMDCVFAPIGIClLGINLSHAADKEEQGWKVVSGVMF--MMAVIPPIPINILYnidnnddtlkvgDILHGIFSFIDPVYPIVGVQLGAYRDGFPtenkngtnvlpdtdgtfewfggwrVWITFA 908
                 567788899999**********************************99999999997667555556****777777777777666555579999*******999888888887..5555555554444433345578888888999*****9999999997666544223335555555555555555554444554444 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.4   7.7e-07   0.00035      12      43 ..     272     304 ..     267     319 .. 0.82
   2 !   12.9   0.1    0.0002     0.092      22      40 ..    1067    1085 ..    1048    1094 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 7.7e-07
   PF13476.1  12 dqeidFskg.ltlItGpNGsGKTTildAiclaL 43 
                 d+ ++  kg ++++ G+NG+GKTT+ ++i+ ++
  MMETSP1325-20131115|4337_1 272 DLSLEIRKGeIFALLGHNGAGKTTLVNCITGMT 304
                 5566675544*******************9876 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 0.0002
   PF13476.1   22 tlItGpNGsGKTTildAic 40  
                  + + GpNG+GKTT l +++
  MMETSP1325-20131115|4337_1 1067 FGLLGPNGAGKTTTLACLT 1085
                  6689***********9986 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1     0.014       6.3      25      45 ..     281     301 ..     267     310 .. 0.82
   2 !    9.1   0.0    0.0014      0.62     120     197 ..     361     440 ..     352     458 .. 0.83
   3 ?    2.2   0.0      0.17        79      28      42 ..    1068    1082 ..    1046    1088 .. 0.80
   4 !    6.6   0.0    0.0077       3.5     136     204 ..    1172    1236 ..    1092    1246 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.014
                 SEEEE--------HHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14  25 sftaivGpNGSGKsnvldAil 45 
                 ++ a++G+NG+GK+ +++ i 
  MMETSP1325-20131115|4337_1 281 EIFALLGHNGAGKTTLVNCIT 301
                 46789************9985 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0014
                 HHHHHHHHHCTT--TT......G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S CS
                 xxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 120 kkevaellesagiske......lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivisl 197
                 + e++ +le+ g++ +      +LSgG+k      L +A+     ap+++lDe  + +D + ++++ +ll   +++   iv + 
  MMETSP1325-20131115|4337_1 361 EDEITTVLEQLGMTAKrhakcsNLSGGQKR----RLWVATCLLGDAPVVFLDEPTSGMDPSSRRELWQLLLDMRDRGRTIVFTT 440
                 56777777777777777777779******8....677888899***************************99999999998764 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.17
                  EE--------HHHHH CS
                  xxxxxxxxxxxxxxx RF
  PF02463.14   28 aivGpNGSGKsnvld 42  
                   ++GpNG+GK+  l 
  MMETSP1325-20131115|4337_1 1068 GLLGPNGAGKTTTLA 1082
                  589*******98765 PP

  == domain 4    score: 6.6 bits;  conditional E-value: 0.0077
                  G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14  136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlek 204 
                  + SgG k  +     +Ai  +  + + +lDe  aa D    + + +++k +  +  ++ ++++ e  e 
  MMETSP1325-20131115|4337_1 1172 TYSGGMKRKL----SLAIALIGASDMLMLDEPSAAVDVGAKRHLWKVIKGRGAHQTVVLTTHSMEEAEA 1236
                  6677777644....455667888999************************9966666666666555544 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       2.4   1.1e+03       8      30 ..     142     164 ..     139     167 .. 0.83
   2 !   14.7   0.0   3.3e-05     0.015      17      43 ..     275     300 ..     268     304 .. 0.83
   3 !   10.6   0.0    0.0006      0.27      22      50 ..    1063    1091 ..    1055    1097 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 2.4
   PF13555.1   8 NWgtfdg.htveidpkgkntlltG 30 
                  W+tf     ++ dp g  + +tG
  MMETSP1325-20131115|4337_1 142 TWYTFFTsSIMPTDPGG-DFKITG 164
                 6*****98888999988.888888 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 3.3e-05
   PF13555.1  17 veidpkgkntlltGasGsGKSTllDAi 43 
                 +ei+ kg+ ++l G++G+GK+Tl+  i
  MMETSP1325-20131115|4337_1 275 LEIR-KGEIFALLGHNGAGKTTLVNCI 300
                 5664.7889**************9876 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 0.0006
   PF13555.1   22 kgkntlltGasGsGKSTllDAiqtlLvpa 50  
                  kg+ + l G++G+GK+T l  ++  L p+
  MMETSP1325-20131115|4337_1 1063 KGECFGLLGPNGAGKTTTLACLTGELRPP 1091
                  5667789***********98777666665 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   4.4e-06     0.002      15      59 ..     259     304 ..     242     326 .. 0.77
   2 ?    3.5   0.0     0.069        32      34      60 ..    1062    1089 ..    1040    1106 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 4.4e-06
                 EEEEECHHHTT-HHHHHHCTT.SBEEEE-------HHHHHHH---- CS
  PF03193.11  15 vlvlsvktkegleelaellkd.ktsvlvGqSGvGKSsLinallpel 59 
                 v+   ++ ++++++l+ ++++ ++ +l+G+ G+GK++L+n +++ +
  MMETSP1325-20131115|4337_1 259 VCEKITEVHKAVNDLSLEIRKgEIFALLGHNGAGKTTLVNCITGMT 304
                 3333344778999999999998*******************98765 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.069
                  TT.SBEEEE-------HHHHHHH----- CS
  PF03193.11   34 kd.ktsvlvGqSGvGKSsLinallpeld 60  
                  ++ ++  l+G+ G+GK++ +  l++el+
  MMETSP1325-20131115|4337_1 1062 RKgECFGLLGPNGAGKTTTLACLTGELR 1089
                  44477889***********999998865 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.028        13      44      73 ..     277     307 ..     260     327 .. 0.76
   2 ?   -0.5   0.0       1.4   6.3e+02     110     149 ..     403     441 ..     390     454 .. 0.78
   3 !    6.5   0.1      0.01       4.5      31      65 ..    1047    1083 ..    1039    1087 .. 0.74
   4 ?    4.3   0.0     0.045        21     103     148 ..    1185    1229 ..    1172    1238 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.028
  PF01695.12  44 veqaenlvllGpsGvGKthlAial.gveavr 73 
                 +++ e ++llG+ G+GKt l   + g+  ++
  MMETSP1325-20131115|4337_1 277 IRKGEIFALLGHNGAGKTTLVNCItGMTGIT 307
                 7889999***********9976552666666 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 1.4
  PF01695.12 110 dllilDdlgllplseeeakllfellskryerrsiiltsnl 149
                  ++ lD+ +   +++ ++  l++ll ++ +r ++i+ +  
  MMETSP1325-20131115|4337_1 403 PVVFLDEPT-SGMDPSSRRELWQLLLDMRDRGRTIVFTTH 441
                 667777764.578999********9999999888886654 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.01
  PF01695.12   31 dkrlikelaslsf.veqaenlvllGpsGvGKth.lAi 65  
                  d + +k++++ s  +++ e++ llGp G+GKt  lA+
  MMETSP1325-20131115|4337_1 1047 DLKSVKAVRGISLgIRKGECFGLLGPNGAGKTTtLAC 1083
                  55666666666654899**************842665 PP

  == domain 4    score: 4.3 bits;  conditional E-value: 0.045
  PF01695.12  103 lkrlakvdllilDdlgllplseeeakllfellskryerrsiiltsn 148 
                  ++ +   d+l+lD+   ++++  ++ +l+++++ r  ++ ++lt+ 
  MMETSP1325-20131115|4337_1 1185 IALIGASDMLMLDEPS-AAVDVGAKRHLWKVIKGRGAHQTVVLTTH 1229
                  55667889******86.67999999*******************96 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.1   0.00012     0.053       9      42 ..     274     307 ..     267     312 .. 0.83
   2 ?    3.1   0.1      0.13        60      12      34 ..    1061    1083 ..    1054    1093 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00012
  PF02367.12   9 aellkagdvvlLsGdlGaGKTtlvkglakglgvk 42 
                   ++++g+++ L G  GaGKTtlv  +    g++
  MMETSP1325-20131115|4337_1 274 SLEIRKGEIFALLGHNGAGKTTLVNCITGMTGIT 307
                 557899******************9987666665 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.13
  PF02367.12   12 lkagdvvlLsGdlGaGKTtlvkg 34  
                  +++g+ + L G+ GaGKTt +  
  MMETSP1325-20131115|4337_1 1061 IRKGECFGLLGPNGAGKTTTLAC 1083
                  57899999**********97655 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0    0.0009      0.41      65      88 ..     403     426 ..     363     428 .. 0.70
   2 ?    2.1   0.1      0.37   1.7e+02      26      72 ..    1166    1199 ..    1154    1216 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0009
   PF13558.1  65 rlvfLDEAFsklDeeniasllell 88 
                   vfLDE++s++D+ ++++l +ll
  MMETSP1325-20131115|4337_1 403 PVVFLDEPTSGMDPSSRRELWQLL 426
                 479****************99987 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.37
   PF13558.1   26 lsrrtgtlSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEA 72  
                   +++ +t SGG k++l   + + ++++++              LDE+
  MMETSP1325-20131115|4337_1 1166 SEKTAETYSGGMKRKLSLAIALIGASDMLM-------------LDEP 1199
                  567778888888865555555555555544.............4444 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.1   0.00022       0.1      26      69 ..     261     304 ..     241     309 .. 0.87
   2 ?    3.6   0.1     0.044        20      47      70 ..    1066    1089 ..    1049    1096 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00022
  PF03215.10  26 kKikeveewlkadflesakkrillltGPsGcgKsTtvkvlskel 69 
                 +Ki ev+++++  +le +k  i+ l G  G+gK+T v+ ++   
  MMETSP1325-20131115|4337_1 261 EKITEVHKAVNDLSLEIRKGEIFALLGHNGAGKTTLVNCITGMT 304
                 69***********************************9887655 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.044
  PF03215.10   47 illltGPsGcgKsTtvkvlskelg 70  
                   + l GP G+gK+Tt+  l+ el 
  MMETSP1325-20131115|4337_1 1066 CFGLLGPNGAGKTTTLACLTGELR 1089
                  56688************9998875 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1      0.02       8.9      10      31 ..     280     300 ..     272     316 .. 0.86
   2 !    9.0   0.2    0.0023         1      13      34 ..    1067    1088 ..    1059    1100 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.02
   PF13245.1  10 npllvvtGgPGtGKTttlaaii 31 
                   ++++ G  G+GKT tl+++i
  MMETSP1325-20131115|4337_1 280 GEIFALLGHNGAGKT-TLVNCI 300
                 678999*********.999988 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0023
   PF13245.1   13 lvvtGgPGtGKTttlaaiiaal 34  
                  + + G+ G+GKTttla++  +l
  MMETSP1325-20131115|4337_1 1067 FGLLGPNGAGKTTTLACLTGEL 1088
                  6679************987665 PP

>> PF13175.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.013       6.1      20      42 ..     277     300 ..     247     325 .. 0.77
   2 ?    0.4   0.0      0.51   2.3e+02     372     410 ..     404     441 ..     398     442 .. 0.92
   3 ?   -0.8   0.0       1.1   5.2e+02      27      42 ..    1069    1084 ..    1052    1113 .. 0.86
   4 ?    2.8   0.0     0.097        44     372     411 ..    1193    1230 ..    1185    1232 .. 0.93

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.013
   PF13175.1  20 lde.slnviiGeNgsGKttILeal 42 
                 + +  +  + G+Ng+GKtt+  ++
  MMETSP1325-20131115|4337_1 277 IRKgEIFALLGHNGAGKTTLVNCI 300
                 333455599***********9999 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.51
   PF13175.1 372 IlliDEPeahlhptlqkellefLkelakknniqiiitTH 410
                 ++ +DEP   ++p+ ++el   L +  +  + +i+ tTH
  MMETSP1325-20131115|4337_1 404 VVFLDEPTSGMDPSSRRELWQLLLDMRD-RGRTIVFTTH 441
                 6789*********************988.9********* PP

  == domain 3    score: -0.8 bits;  conditional E-value: 1.1
   PF13175.1   27 iiGeNgsGKttILeal 42  
                  + G Ng+GKtt L +l
  MMETSP1325-20131115|4337_1 1069 LLGPNGAGKTTTLACL 1084
                  6799********9999 PP

  == domain 4    score: 2.8 bits;  conditional E-value: 0.097
   PF13175.1  372 IlliDEPeahlhptlqkellefLkelakknniqiiitTHs 411 
                   l++DEP a  ++ +++ l + +k      + ++++tTHs
  MMETSP1325-20131115|4337_1 1193 MLMLDEPSAAVDVGAKRHLWKVIKGRGA--HQTVVLTTHS 1230
                  6899************************..*********9 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.2    0.0016      0.73       6      30 ..     283     307 ..     279     317 .. 0.88
   2 ?    1.9   0.0      0.25   1.1e+02       6      27 ..    1067    1088 ..    1065    1102 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0016
                 EEEEESTT---HHHHHHHHHHCCCC CS
  PF00009.22   6 igiighvDhGKtTltdallykagai 30 
                 ++++gh  +GKtTl+++++  +g++
  MMETSP1325-20131115|4337_1 283 FALLGHNGAGKTTLVNCITGMTGIT 307
                 6889***************999875 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.25
                  EEEEESTT---HHHHHHHHHHC CS
  PF00009.22    6 igiighvDhGKtTltdallyka 27  
                  +g++g   +GKtT++++l+ ++
  MMETSP1325-20131115|4337_1 1067 FGLLGPNGAGKTTTLACLTGEL 1088
                  67888999**********9765 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.031        14       3      35 ..     285     322 ..     283     440 .. 0.84
   2 ?    6.0   0.0     0.026        12       3      35 ..    1069    1104 ..    1067    1136 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.031
                 EE-------HHHHHHHHHHCT.....HEEEEEECCSSS CS
  PF00004.24   3 lyGppGtGKTllakavakelg.....vefleisgsell 35 
                 l G  G GKT+l++ +   +g     +++l +s+ + +
  MMETSP1325-20131115|4337_1 285 LLGHNGAGKTTLVNCITGMTGitggdASILGFSCRDAI 322
                 88*************99998633333556666666555 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.026
                  EE-------HHHHHHHHHHCT...HEEEEEECCSSS CS
  PF00004.24    3 lyGppGtGKTllakavakelg...vefleisgsell 35  
                  l Gp G GKT++   +  el    +  + i+g e++
  MMETSP1325-20131115|4337_1 1069 LLGPNGAGKTTTLACLTGELRpptSGQVFIDGDEVT 1104
                  78***********99999985322334555555555 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0     0.004       1.8       2      22 ..     283     303 ..     282     392 .. 0.91
   2 ?    2.9   0.0       0.2        93       2      22 ..    1067    1087 ..    1066    1106 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.004
                 EEEE--TT---HHHHHHHHCS CS
  PF01926.18   2 vaivGrpNvGKStLinaLtge 22 
                 +a++G+  +GK+tL+n +tg 
  MMETSP1325-20131115|4337_1 283 FALLGHNGAGKTTLVNCITGM 303
                 589***************973 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.2
                  EEEE--TT---HHHHHHHHCS CS
  PF01926.18    2 vaivGrpNvGKStLinaLtge 22  
                  ++++G   +GK+t +  Ltge
  MMETSP1325-20131115|4337_1 1067 FGLLGPNGAGKTTTLACLTGE 1087
                  589***************985 PP

>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   1.4     0.097        44       3      18 ..     282     297 ..     280     309 .. 0.87
   2 ?    9.8   0.0   0.00095      0.43       6      23 ..    1069    1086 ..    1065    1102 .. 0.84

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.097
                 EEEEE-------TTTH CS
  PF00448.17   3 villvGlqGaGKTTtl 18 
                 +++l+G +GaGKTT +
  MMETSP1325-20131115|4337_1 282 IFALLGHNGAGKTTLV 297
                 6789**********87 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00095
                  EE-------TTTHHHHHH CS
  PF00448.17    6 lvGlqGaGKTTtlaKLAa 23  
                  l+G++GaGKTTtla L  
  MMETSP1325-20131115|4337_1 1069 LLGPNGAGKTTTLACLTG 1086
                  79************8865 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.16        71      20      40 ..     284     304 ..     269     316 .. 0.80
   2 ?    8.0   0.0    0.0027       1.2      23      52 ..    1071    1102 ..    1066    1113 .. 0.93

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.16
   PF06414.7  20 llgGqpGAGKtslaellleel 40 
                  l G  GAGKt+l + + + +
  MMETSP1325-20131115|4337_1 284 ALLGHNGAGKTTLVNCITGMT 304
                 57799********99887765 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0027
   PF06414.7   23 GqpGAGKtslaellleela..agnivridaDe 52  
                  G+ GAGKt+++  l +el+  + + v id+De
  MMETSP1325-20131115|4337_1 1071 GPNGAGKTTTLACLTGELRppTSGQVFIDGDE 1102
                  99*******************999*******9 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00078      0.36      19      42 ..     277     299 ..     261     330 .. 0.81
   2 ?    4.1   0.1       0.1        48      25      43 ..    1066    1084 ..    1051    1097 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00078
   PF13191.1  19 vsegsplllvtGpsGiGKSsLlre 42 
                 ++ g+ ++ ++G+ G GK++L+++
  MMETSP1325-20131115|4337_1 277 IRKGE-IFALLGHNGAGKTTLVNC 299
                 45666.99**************99 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.1
   PF13191.1   25 lllvtGpsGiGKSsLlrel 43  
                  ++ ++Gp G GK++ l +l
  MMETSP1325-20131115|4337_1 1066 CFGLLGPNGAGKTTTLACL 1084
                  66699**********9884 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.031        14      31      50 ..     278     297 ..     259     321 .. 0.87
   2 ?    4.9   0.0     0.029        13      30      57 ..    1061    1088 ..    1040    1157 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.031
   PF13481.1  31 prgsltllaGapgtGKStla 50 
                  +g++ +l G  g+GK+tl+
  MMETSP1325-20131115|4337_1 278 RKGEIFALLGHNGAGKTTLV 297
                 5899**************98 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.029
   PF13481.1   30 lprgsltllaGapgtGKStlalqlaaav 57  
                  + +g+   l G+ g+GK+t ++ l + +
  MMETSP1325-20131115|4337_1 1061 IRKGECFGLLGPNGAGKTTTLACLTGEL 1088
                  56899999***********998876655 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1    0.0073       3.3       4      34 ..     283     313 ..     281     321 .. 0.87
   2 ?   -1.3   0.0         2   9.3e+02      15      67 ..     913     963 ..     909    1000 .. 0.78
   3 ?    2.4   0.0      0.15        67       6      25 ..    1069    1088 ..    1066    1121 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0073
   PF12846.2   4 tlilGppGsGKSvllkklvlqllargprvvi 34 
                 +++lG  G+GK++l++ ++      g++  i
  MMETSP1325-20131115|4337_1 283 FALLGHNGAGKTTLVNCITGMTGITGGDASI 313
                 6899**************9998888887766 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 2
   PF12846.2  15 SvllkklvlqllargprvviiDpggeysglaralggqvidlgegkgislNPfd 67 
                 S+ + +l+l +  rg+  + +D+++    la+a gg +++ ++++    NP+ 
  MMETSP1325-20131115|4337_1 913 STVMLYLALVYRDRGYVFIAPDTEDKIGALAQAEGG-AVNADGTNSN-DNPLS 963
                 899999999999999999999******999999955.4444444444.47766 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.15
   PF12846.2    6 ilGppGsGKSvllkklvlql 25  
                  +lGp G+GK+++l  l+ +l
  MMETSP1325-20131115|4337_1 1069 LLGPNGAGKTTTLACLTGEL 1088
                  79**********99987655 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2      0.05        23       3      23 ..     279     299 ..     276     312 .. 0.88
   2 ?   -1.0   0.0       3.6   1.6e+03      18      59 ..     365     427 ..     365     455 .. 0.76
   3 ?    5.8   0.0     0.027        12       6      28 ..    1066    1088 ..    1061    1112 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.05
   PF13401.1   3 sagilvvtGesGvGKTtllrr 23 
                 +  i ++ G  G+GKTtl++ 
  MMETSP1325-20131115|4337_1 279 KGEIFALLGHNGAGKTTLVNC 299
                 567999***********9875 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 3.6
   PF13401.1  18 Ttllrrlarqldeeaeaae.................karvvfveapast....spkellqkll 59 
                 Tt+l++l ++++++a+  +                 +a+vvf + p s+    s +el+q ll
  MMETSP1325-20131115|4337_1 365 TTVLEQLGMTAKRHAKCSNlsggqkrrlwvatcllgDAPVVFLDEPTSGmdpsSRRELWQLLL 427
                 677777777777777777788888888888888888999999999999888866666666555 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.027
   PF13401.1    6 ilvvtGesGvGKTtllrrlarql 28  
                  +  + G+ G+GKTt+l  l  +l
  MMETSP1325-20131115|4337_1 1066 CFGLLGPNGAGKTTTLACLTGEL 1088
                  56688**********99887665 PP

>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   9.1   0.00012     0.057      85     173 ..      10      97 ..       1     137 [. 0.88
   2 ?   -1.3   0.4         2     9e+02     105     127 ..     175     196 ..     171     211 .. 0.69
   3 ?    7.9   0.4    0.0029       1.3      79     173 ..     720     827 ..     618     835 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00012
  PF01061.19  85 elvsplyslsaivlakvlvelpvsllqaiifllivyflvgldlsfflflllllltalfasslgllisalapsfedasqlasllllplll 173
                 ++v+++ +++ + l +++  ++++++++i+++ +++ ++ +d   +l+++ l+l+++  +++g +++a+a++++da+ +a+++ l+ l+
  MMETSP1325-20131115|4337_1  10 QIVNGV-PPWLYWLTYFFQFMCLAFCACILWTGVFLGTIAFDCGPLLVFIPLILSHIQVFAIGVIVCAVANKMQDAVGMANIMQLLALI 97 
                 678899.*******************************9****669*9*******************************9998776554 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 2
  PF01061.19 105 lpvsllqaiifllivyflvgldl 127
                 +++++ q++ ++l++y++   ++
  MMETSP1325-20131115|4337_1 175 FLWMFPQTLFWVLFAYWV-DQTW 196
                 567788888888888886.5444 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.0029
  PF01061.19  79 rgvlerelvsplyslsaiv.....lakvlvelpvsllqaiifllivyflvgldls..........fflflllllltalfasslgllisalapsfedasqlasllllplll 173
                   +l+re+v+++ ++ +i+     +++++++l++ ++q +i+ ++v ++  ++l           +++ l+ +++  + ++ lg+ +s  a ++e+  +++s +++++ +
  MMETSP1325-20131115|4337_1 720 AVTLMRERVNKA-KHVMIAqglspTSYIFGSLLFVVIQMTIIGAFVPIV-EWNLMqaanltngrdGLVWLMDCVFAPIGICLLGINLSHAADKEEQGWKVVSGVMFMMAV 827
                 444444444444.333332122224455555566666666666655554.444445455556555466677788888888889*********************999965 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.046        21       3      17 ..     284     298 ..     282     307 .. 0.85
   2 ?    4.2   0.0     0.071        33       4      24 ..    1069    1089 ..    1068    1164 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.046
   PF13671.1   3 llvGlpGsGKstlae 17 
                  l G+ G+GK+tl++
  MMETSP1325-20131115|4337_1 284 ALLGHNGAGKTTLVN 298
                 689*********986 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.071
   PF13671.1    4 lvGlpGsGKstlaerllkklg 24  
                  l G+ G+GK+t +  l  +l 
  MMETSP1325-20131115|4337_1 1069 LLGPNGAGKTTTLACLTGELR 1089
                  57*********9988866664 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.048        22       3      23 ..     284     304 ..     283     313 .. 0.87
   2 ?    4.1   0.0      0.12        56       3      31 ..    1068    1096 ..    1067    1112 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.048
   PF08477.8   3 vvvGdkgvGKssllsqlvgee 23 
                 +++G  g+GK++l++ ++g++
  MMETSP1325-20131115|4337_1 284 ALLGHNGAGKTTLVNCITGMT 304
                 689***********9888776 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.12
   PF08477.8    3 vvvGdkgvGKssllsqlvgeefpkkklpe 31  
                   ++G  g+GK++ l+ l+ge +p+ + + 
  MMETSP1325-20131115|4337_1 1068 GLLGPNGAGKTTTLACLTGELRPPTSGQV 1096
                  57999************999888555555 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.027        13       4      20 ..     284     300 ..     281     305 .. 0.86
   2 ?    3.1   0.0      0.12        55       5      25 ..    1069    1089 ..    1066    1097 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.027
   PF05729.7   4 ilqGeaGsGKTtLlqkl 20 
                 +l G +G GKTtL+  +
  MMETSP1325-20131115|4337_1 284 ALLGHNGAGKTTLVNCI 300
                 799**********9765 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.12
   PF05729.7    5 lqGeaGsGKTtLlqklasawa 25  
                  l G++G GKTt l+ l  +++
  MMETSP1325-20131115|4337_1 1069 LLGPNGAGKTTTLACLTGELR 1089
                  68*********9998876665 PP

>> PF09818.4  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1    0.0082       3.8     239     265 ..     274     301 ..     254     306 .. 0.82
   2 ?    0.9   0.1      0.27   1.2e+02     230     264 ..    1047    1084 ..    1019    1088 .. 0.87
   3 ?   -2.5   0.0       2.7   1.2e+03     316     353 ..    1166    1203 ..    1154    1205 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0082
   PF09818.4 239 GlgipkG.itlIvGggyhGKsTLLeAle 265
                  l i+kG i+++ G +  GK+TL++ + 
  MMETSP1325-20131115|4337_1 274 SLEIRKGeIFALLGHNGAGKTTLVNCIT 301
                 46799*******************9985 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.27
   PF09818.4  230 elpnkgkvsG..lgipkG.itlIvGggyhGKsTLLeAl 264 
                  +l++ ++v+G  lgi+kG  + + G +  GK+T L  l
  MMETSP1325-20131115|4337_1 1047 DLKSVKAVRGisLGIRKGeCFGLLGPNGAGKTTTLACL 1084
                  56777888885579*******************99876 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 2.7
   PF09818.4  316 tefstedASGStsqAanimealeagakllLiDEDtsAt 353 
                  +e + e+ SG ++   +++ al   +++l++DE ++A+
  MMETSP1325-20131115|4337_1 1166 SEKTAETYSGGMKRKLSLAIALIGASDMLMLDEPSAAV 1203
                  5667788899999999*****************99997 PP

>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.3     0.016       7.2       3      21 ..     283     301 ..     281     307 .. 0.86
   2 ?    2.7   0.1      0.14        64       3      20 ..    1067    1084 ..    1065    1094 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.016
                 EEEE-------HHHHHHHH CS
  PF02492.14   3 tvltGflGsGKTtLlekll 21 
                 + l G  G+GKTtL++ ++
  MMETSP1325-20131115|4337_1 283 FALLGHNGAGKTTLVNCIT 301
                 5689999********9775 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.14
                  EEEE-------HHHHHHH CS
  PF02492.14    3 tvltGflGsGKTtLlekl 20  
                  + l G+ G+GKTt l  l
  MMETSP1325-20131115|4337_1 1067 FGLLGPNGAGKTTTLACL 1084
                  6799*********98765 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.2      0.15        67       6      21 ..     283     298 ..     278     307 .. 0.86
   2 ?   -1.8   0.0       3.8   1.7e+03     120     166 ..     428     474 ..     418     488 .. 0.73
   3 ?    3.8   0.1     0.075        34       8      23 ..    1069    1084 ..    1063    1093 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.15
   PF13479.1   6 vliYGkpGiGKTslak 21 
                 ++++G  G+GKT+l+ 
  MMETSP1325-20131115|4337_1 283 FALLGHNGAGKTTLVN 298
                 7899*********975 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 3.8
   PF13479.1 120 tkllsalgknvvftAhederkd..edggaytrfelklgkkvanelpgiv 166
                 +   +++g ++vft h  e+ d   d +a ++  +     +++el+  +
  MMETSP1325-20131115|4337_1 428 D--MRDRGRTIVFTTHYLEEADllADRKAVMVKGQIKAMGTSRELKHEF 474
                 4..5789*********999999887777777766666666666666655 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.075
   PF13479.1    8 iYGkpGiGKTslaktl 23  
                  ++G+ G+GKT++++ l
  MMETSP1325-20131115|4337_1 1069 LLGPNGAGKTTTLACL 1084
                  68*********99865 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.2     0.017       7.9      23      39 ..     287     303 ..     280     313 .. 0.87
   2 ?    0.5   0.0      0.31   1.4e+02      23      32 ..    1071    1080 ..    1069    1092 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.017
   PF13166.1  23 GrNGsGKtTlSrllrsl 39 
                 G+NG+GKtTl + ++ +
  MMETSP1325-20131115|4337_1 287 GHNGAGKTTLVNCITGM 303
                 9*********9988765 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.31
   PF13166.1   23 GrNGsGKtTl 32  
                  G+NG+GKtT 
  MMETSP1325-20131115|4337_1 1071 GPNGAGKTTT 1080
                  9*******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1390 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        88  (0.00643651); expected 13.7 (0.001)
Passed Fwd filter:                        30  (0.00219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 2.24u 0.42s 00:00:02.66 Elapsed: 00:00:00.84
# Mc/sec: 3965.40
//
Query:       MMETSP1325-20131115|4347_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0034   17.7   0.0     0.0099   16.2   0.0    1.7  2  PF13637.1 Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   7.3e-07    0.0099      15      51 ..       2      39 ..       1      42 [. 0.91
   2 ?   -1.6   0.0      0.28   3.8e+03      36      45 ..      50      59 ..      46      66 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 7.3e-07
   PF13637.1 15 elvklLlek.gidinrtdesGntaLhiAalrgnieilk 51
                elv+ L+e+ g+d+ ++d++G+ta + A  +g++++++
  MMETSP1325-20131115|4347_1  2 ELVRVLVETdGVDPLKKDDDGMTARDHAMFMGFPNLVR 39
                89******989*************99999999988887 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.28
   PF13637.1 36 taLhiAalrg 45
                 aLh+ +++g
  MMETSP1325-20131115|4347_1 50 RALHCPLRFG 59
                5888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 635.77
//
Query:       MMETSP1325-20131115|4343_1  [L=405]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-35  120.7   6.3      8e-35  120.3   4.4    1.0  1  PF00654.15 Voltage gated chloride channel
  ------ inclusion threshold ------
      0.037   13.8   0.1      0.072   12.8   0.0    1.5  1  PF00482.18 Type II secretion system (T2SS), protein F
       0.29   10.4   4.1       0.17   11.2   0.6    2.0  2  PF14187.1  Domain of unknown function (DUF4310)


Domain annotation for each model (and alignments):
>> PF00654.15  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.3   4.4   1.8e-38     8e-35     131     353 ..       7     293 ..       2     295 .. 0.86

  Alignments for each domain:
  == domain 1    score: 120.3 bits;  conditional E-value: 1.8e-38
                 ---HHHHHHHHHHSTT--S.........-.T---............--GGGHHHHHH----------CCCHHHHHHHHHHHCH-.CHHHH.HHH-----------TTTSSCC..C-----TC..................................................HHHHC.TS---HHHHHH...HHHHHHHHHHHHHT-------HHHHHH-HHHHHHHHHHHHHHH-CTSST...HHCCC-----HHHHCCS-CCHHHHHHHHCC--GCCHHHHHHHHHHHHHHH CS
  PF00654.15 131 vaslvaalvlrlllgsepa.........fgevtalf.........alsllelilfvllGilgGllGalFvrlllkveklfrklk.klkvp.krlepalvglltgllalllpansvlgggyal..................................................lasll.sgstlllsllllllllvlkllataltlgsglpgGifvPsLviGAalGrlvglvlallfpgdassdpgayaliGaaaflagvtrapltaivilfEltgslelllplmlavaiAklva 353
                 +a+++a+lv+  l+    +         f++ +++f          +++ +++ f+l++i +G+ +++  r+ +++++++r+ + + ++  k+le+al++llt+l+  llpa  v+ g ++                                                   +++ll  + tl +++++l+++l++++ a +l++g++lp+G+fvP L  G ++Grl+g+v+     +d +s+pg++a+iGa+a l++ tr+++++++++ E+tg+l+l++p++l++a+A+ va
  MMETSP1325-20131115|4343_1   7 IAAATATLVIGGLF----NlsegslsvnFNS-VVIFdpkdsfgslLWTYADVPSFLLAAIGAGVQAGVLGRIGVFLTRYRRRAEwRQSTVaKVLEAALLALLTALIFALLPA--VVDGCEGVpeddhydddhrrlsgrqlggaaprryvswtcedetfsplasltlvgeegaIRHLLaRDGTLNFTPASLVIFLLAYFTACSLAMGLSLPAGTFVPNLLAGCCWGRLIGEVAVRTSLRDYCSNPGVVAAIGAGAQLGAWTRTSMAITCLIAEVTGDLSLVVPTLLSIALAREVA 293
                 44555555555554....3222244444442.33337888889999*******************************99999987777774555*****************9..999999889999**********************************999999999999777766666789*********************************************8888887788777************************************************9886 PP

>> PF00482.18  Type II secretion system (T2SS), protein F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.6e-05     0.072      56     122 ..      49     115 ..      21     117 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.6e-05
                 TT.TS-HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXX CS
  PF00482.18  56 ps.efpdlvaaliaagesgGnlaevLerladyleerrelrkkllaalleplllvivallillillavv 122
                 +  ++p +++a i ag + G l+ +  +l + +++r e r+   a  le +ll+++++li+++l avv
  MMETSP1325-20131115|4343_1  49 TYaDVPSFLLAAIGAGVQAGVLGRIGVFLTR-YRRRAEWRQSTVAKVLEAALLALLTALIFALLPAVV 115
                 334789********************99998.889999999********************9997776 PP

>> PF14187.1  Domain of unknown function (DUF4310)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.13   6.2e+02      66      84 ..      55      73 ..       3     114 .. 0.69
   2 ?   11.2   0.6   3.8e-05      0.17      95     173 ..     197     272 ..     185     297 .. 0.70

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.13
   PF14187.1 66 sfllarileGslvGildiG 84
                sflla i  G   G+l   
  MMETSP1325-20131115|4343_1 55 SFLLAAIGAGVQAGVLGRI 73
                3334433333333333333 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 3.8e-05
   PF14187.1  95 vpalllsaglealvenfalslltGavlGliiGlviilirkftinqsnstfGadimmGaGnasGrflGpliilsavaasi 173
                 ++a  l++gl+ +  +f+  ll+G   G +iG v +  r  ++ +  s  G    +GaG + G +    + ++ + a++
  MMETSP1325-20131115|4343_1 197 FTACSLAMGLSLPAGTFVPNLLAGCCWGRLIGEVAV--RT-SLRDYCSNPGVVAAIGAGAQLGAWTRTSMAITCLIAEV 272
                 67899***************************9865..44.55555555555556666666555555555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.82
# Mc/sec: 1183.57
//
Query:       MMETSP1325-20131115|4346_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.9   1.0      0.011   15.9   0.0    2.3  2  PF08232.7  Striatin family
  ------ inclusion threshold ------
       0.34   10.3   2.1        2.1    7.7   0.0    2.2  2  PF04977.10 Septum formation initiator
        3.8    7.6  10.0       0.17   11.9   1.0    2.9  3  PF07941.6  Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.4e-06     0.011      29      89 ..      52     114 ..      50     156 .. 0.75
   2 ?    1.1   0.2     0.091   4.1e+02      73      93 ..     272     295 ..     256     324 .. 0.45

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.4e-06
   PF08232.7  29 EmkarIakLeGerrglenlkedLkrrvkmLekalkqeraklksl..kagveseskqeskssae 89 
                 Em+a I+ L+ e+r+l++++ + +  v+  +++l++ ra   s   +ag++ + +q+++ +++
  MMETSP1325-20131115|4346_1  52 EMRAMIMALQAEVRTLTQTNAEVRAMVQTKDAELNRLRAGGSSQhqSAGTTPNAQQRRAPPQH 114
                 9***********************************999644420022222222333333333 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.091
   PF08232.7  73 kagveses...kqeskssaeeeel 93 
                 ++g +++    +q++++++++++ 
  MMETSP1325-20131115|4346_1 272 TYGYQQQAqayQQQRQQQEHADAA 295
                 444333332221111111111111 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0   0.00045       2.1      19      51 ..      57      89 ..      53      94 .. 0.88
   2 ?    1.6   0.5     0.038   1.7e+02      13      27 ..     276     290 ..     267     301 .. 0.55

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00045
  PF04977.10 19 lyqlkqeiaalqaelaklkaeneeLeaevkdLk 51
                +++l++e+ +l++++a+++a  +  +ae+++L+
  MMETSP1325-20131115|4346_1 57 IMALQAEVRTLTQTNAEVRAMVQTKDAELNRLR 89
                678999**************9999999999996 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.038
  PF04977.10  13 ksgllalyqlkqeia 27 
                 +++ +a++q++q+ +
  MMETSP1325-20131115|4346_1 276 QQQAQAYQQQRQQQE 290
                 333344444444433 PP

>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.71   3.2e+03      45      60 ..      28      43 ..       8      49 .. 0.61
   2 ?   -0.1   0.1      0.22     1e+03      58      74 ..      98     114 ..      59     128 .. 0.73
   3 ?   11.9   1.0   3.8e-05      0.17      18      52 ..     272     308 ..     262     315 .. 0.69

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.71
                HHSSXSXXXXXXXXXX CS
   PF07941.6 45 aaataaveGeGGsGGG 60
                 aa+a ve   G  GG
  MMETSP1325-20131115|4346_1 28 GAASARVEPLVGHDGG 43
                3455666666565444 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.22
                 XXXXXXXSXXXXXXXXX CS
   PF07941.6  58 GGGagvnaqtrqvyesq 74 
                   G+  naq+r ++ ++
  MMETSP1325-20131115|4346_1  98 SAGTTPNAQQRRAPPQH 114
                 45666677888887776 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 3.8e-05
                 ----CCCHHHHHHHHH..TTSSTTXXXHHHHSSXSXX CS
   PF07941.6  18 PyGyaaqararererl..ahsraaaaaavaaataave 52 
                  yGy  qa+a +++r+   h+ aa  a +aa  + ve
  MMETSP1325-20131115|4346_1 272 TYGYQQQAQAYQQQRQqqEHADAARPALAAARPSEVE 308
                 59**999999776665115666666566665555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.34s 00:00:01.08 Elapsed: 00:00:00.49
# Mc/sec: 1662.78
//
Query:       MMETSP1325-20131115|4348_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-54  183.6   1.6    6.7e-54  182.6   1.1    1.5  1  PF04641.7 Replication termination factor 2
  ------ inclusion threshold ------
       0.41   10.5  12.9       0.03   14.2   4.2    2.2  2  PF05501.6 Domain of unknown function (DUF755)
       0.86    8.9  29.3       0.24   10.7  11.0    2.5  3  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.6   1.1   1.5e-57   6.7e-54       1     221 [.       1     263 [.       1     332 [. 0.83

  Alignments for each domain:
  == domain 1    score: 182.6 bits;  conditional E-value: 1.5e-57
   PF04641.7   1 mGnDGGsipkRdeLvke...........kkkkekvdkeeekearwklCaLskepLek..PivadrlGkLYnkdavleaLldkskeealskalshikglkdvvelkltknpaeeeska...........arkdtkeapfiCpvtglelngktkfvalrkcGcVfsekalkevkeekvCpvCnkefkeedvvplnptkeelellkarleeekakkkkkkkkkkkkkaeakgekaeaeaksksskee........................s 221
                 mG+DGG  p+ +++++            k++  ++dk+e+   r ++CaL++epL    P+vad+lG+L++k++++eaL+dk    +++ ++ hi+glkdv+ +++t np + e++              +++  +p++Cpv++ e+ngk+ fv++r+ G+V+se+alk+v    +      +f eed ++l p++ee ++l +r++e++a+k +kk++kk+kk + ++++a+++ +s+ss ++                        +
  MMETSP1325-20131115|4348_1   1 MGGDGGCHPNGRKFMRPgmlqdadarakKARDAQADKREQTLIRTRTCALTNEPLVMdsPVVADELGNLFSKQHLIEALMDK----KIPTEFDHIRGLKDVTSCRFTANPSWVEATDngskaeaaggfYWSTDVASPYACPVSQVEMNGKNPFVVVRTTGWVLSERALKQVG-LANLQEEYGPFAEEDCIKLAPNEEERAALVTRMNEARAAKAAKKAAKKDKKRKLAAAEASSSSSSSSS-NSgsgataaedasavvagpvfdakaaA 263
                 9*********9999999999999998877777888*******************97556***********************....68***********************9988888999999999777888899***********************************8.333356689***************************************99997766665555555443.444666666666666665555554441 PP

>> PF05501.6  Domain of unknown function (DUF755)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   4.2   6.6e-06      0.03      89     117 ..     208     240 ..     187     245 .. 0.56
   2 ?   -0.4   0.4      0.22   9.9e+02     102     117 ..     281     301 ..     269     307 .. 0.38

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 6.6e-06
   PF05501.6  89 vssrsakkksakkr....kksssSSssssssss 117
                  ++++a kk +k++    + sssSSssss+s s
  MMETSP1325-20131115|4348_1 208 KAAKKAAKKDKKRKlaaaEASSSSSSSSSNSGS 240
                 234555555555557865444444444444444 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.22
   PF05501.6 102 r.....kksssSSssssssss 117
                        k+  S   sss ss
  MMETSP1325-20131115|4348_1 281 TgtdgvGKRAVSGLASSSASS 301
                 133355333333222222222 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.53   2.4e+03      86      96 ..      29      39 ..      20      66 .. 0.48
   2 ?   10.7  11.0   5.4e-05      0.24      36      83 ..     200     247 ..     188     252 .. 0.72
   3 ?    6.0   1.7    0.0014       6.6      52      96 ..     274     322 ..     255     341 .. 0.56

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.53
   PF10500.4 86 kkrkkkkkkre 96
                k r+++ +kre
  MMETSP1325-20131115|4348_1 29 KARDAQADKRE 39
                22222222222 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 5.4e-05
   PF10500.4  36 rkksksskesrkkrekkkkkrrerssssssssssssssssssssksee 83 
                 r +++ + ++ kk +kk kkr+  ++  sssssssss s s   ++e+
  MMETSP1325-20131115|4348_1 200 RMNEARAAKAAKKAAKKDKKRKLAAAEASSSSSSSSSNSGSGATAAED 247
                 555566666788888888888888888888888888888887766654 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.0014
   PF10500.4  52 kkkkrrers......ssssssssssssssssssskseekrkkrkkkkkkre 96 
                  kkk++  s       +++ s  +sss+ss  ss  +e +k r+++++  +
  MMETSP1325-20131115|4348_1 274 PKKKKK--StgtdgvGKRAVSGLASSSASSMASSILDEVAKVREAQSDLYK 322
                 233333..2235666666666666666666677777777777777776543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1020  (0.074605); expected 273.4 (0.02)
Passed bias filter:                      452  (0.0330603); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.38s 00:00:01.21 Elapsed: 00:00:00.62
# Mc/sec: 1472.60
//
Query:       MMETSP1325-20131115|4349_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 498.07
//
Query:       MMETSP1325-20131115|4350_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       698  (0.0510532); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 786.01
//
Query:       MMETSP1325-20131115|4351_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       553  (0.0404476); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.64
# Mc/sec: 490.50
//
Query:       MMETSP1325-20131115|4353_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|4355_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.064   13.0   0.0      0.064   13.0   0.0    1.1  1  PF04003.7 Dip2/Utp12 Family


Domain annotation for each model (and alignments):
>> PF04003.7  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   4.7e-06     0.064      44      73 ..      33      61 ..       1      67 [. 0.68

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 4.7e-06
   PF04003.7 44 edsphlefllrwlkallsaHgkalqaqaps 73
                   +h+e++lr+++al ++H++++    ++
  MMETSP1325-20131115|4355_1 33 LLKTHAELMLRCCEALRRSHAAQFEGV-ST 61
                3345*******************9876.55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|4356_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|4357_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 762.04
//
Query:       MMETSP1325-20131115|4358_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   14.5   0.0      0.027   14.1   0.0    1.1  1  PF04513.7 Baculovirus polyhedron envelope protein, PEP, C terminus


Domain annotation for each model (and alignments):
>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0     2e-06     0.027       9      66 ..      26      80 ..      18      90 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2e-06
   PF04513.7  9 ggggnqfldLtnvLnairlqnvqilaqlatlldaietqLnalsedlksllaeldtrld 66
                +ggg++  +L +vL+a+r  n+ ++++l++  d i++++ +++ +  +l ++ld+ l+
  MMETSP1325-20131115|4358_1 26 VGGGGG--NLQPVLDALRKHNTIMSTALENVAD-IAKRFFTFEIEEDDLRSQLDACLK 80
                445554..9*******************99887.777777766655565556555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       772  (0.0564658); expected 273.4 (0.02)
Passed bias filter:                      541  (0.0395699); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 548.98
//
Query:       MMETSP1325-20131115|4354_1  [L=354]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.5e-47  156.9   0.0      4e-13   48.5   0.0    4.3  4  PF13475.1 Domain of unknown function (DUF4116)


Domain annotation for each model (and alignments):
>> PF13475.1  Domain of unknown function (DUF4116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   4.3e-13   5.9e-09       5      49 .]     181     225 ..     177     225 .. 0.95
   2 !   32.7   0.0   2.4e-12   3.3e-08       1      38 [.     227     264 ..     227     271 .. 0.94
   3 !   35.6   0.0     3e-13     4e-09      15      49 .]     279     313 ..     267     313 .. 0.91
   4 !   48.5   0.0   2.9e-17     4e-13       1      38 [.     315     352 ..     315     354 .] 0.98

  Alignments for each domain:
  == domain 1    score: 35.1 bits;  conditional E-value: 4.3e-13
   PF13475.1   5 vleavkkngsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49 
                 v +av++ ++ l  +s+eL+nD+ +v++Av  ng al+yas +L+
  MMETSP1325-20131115|4354_1 181 VIAAVERKPYELALASDELRNDRGVVMAAVGGNGMALYYASRDLK 225
                 789**************************************9997 PP

  == domain 2    score: 32.7 bits;  conditional E-value: 2.4e-12
   PF13475.1   1 DrEivleavkkngsalkylseeLknDkeivlkAvkqng 38 
                 Dr ++leav++ng+al ++s++L +D e+vl+A ++n 
  MMETSP1325-20131115|4354_1 227 DRSFALEAVQRNGKALLHVSDKLLRDHEFVLAAAQRNL 264
                 99*******************************99995 PP

  == domain 3    score: 35.6 bits;  conditional E-value: 3e-13
   PF13475.1  15 alkylseeLknDkeivlkAvkqngsalsyaseeLr 49 
                 +  y+s++L++++eivl+Av+q+ sal+yas eLr
  MMETSP1325-20131115|4354_1 279 CMLYASNKLRSNREIVLAAVEQDWSALEYASVELR 313
                 677******************************98 PP

  == domain 4    score: 48.5 bits;  conditional E-value: 2.9e-17
   PF13475.1   1 DrEivleavkkngsalkylseeLknDkeivlkAvkqng 38 
                 DrEivl+av++ng al+y+s eL++D+eiv +Av+qng
  MMETSP1325-20131115|4354_1 315 DREIVLAAVEQNGRALEYASVELRSDREIVQAAVEQNG 352
                 9************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 1731.25
//
Query:       MMETSP1325-20131115|4359_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-13   49.2   0.0    5.3e-13   48.6   0.0    1.2  1  PF01121.15 Dephospho-CoA kinase


Domain annotation for each model (and alignments):
>> PF01121.15  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   3.9e-17   5.3e-13      96     178 ..      15      98 ..       3     100 .. 0.87

  Alignments for each domain:
  == domain 1    score: 48.6 bits;  conditional E-value: 3.9e-17
                 HHHHH--S.SEEEEE-TTTTTTTGGGG-SCEEEEE--HHHHHHHHHHCH.TSTHHHHHHHHHHS--HHHHHHH-SEEEE-.S-H CS
  PF01121.15  96 kelaaleseayvlldvPLLvEsqlekliervlvvdvdlelqveRlverd.glseeevkaiiaaQaseeerlaladvvldNdssl 178
                 ++l+a  + +++l++  LLvE+++ +l+++v+ v vd+e  +eRl++rd  l+e+ ++a++++Q+s++er a+ d  l N +++
  MMETSP1325-20131115|4359_1  15 SALSAPDAPPCILVEAALLVEAGWVDLVDEVWGVCVDPECALERLLKRDpRLDEDAARARLQSQMSNAERAAHCDLELLNTGDM 98 
                 444445555899*************************************8899999**********************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 759.60
//
Query:       MMETSP1325-20131115|4361_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        60  (0.00438853); expected 273.4 (0.02)
Passed bias filter:                       57  (0.0041691); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 324.51
//
Query:       MMETSP1325-20131115|4352_1  [L=1075]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-14   53.0   3.7    4.2e-14   52.1   2.5    1.3  1  PF00722.16 Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> PF00722.16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   2.5     3e-18   4.2e-14      18     166 ..     808     969 ..     799     981 .. 0.80

  Alignments for each domain:
  == domain 1    score: 52.1 bits;  conditional E-value: 3e-18
                 --.-EEEEEEEEE.TCEEEEEEEEESSEEEE-EEEEEEE..-------EEEEEEE-TTT.----EEEEEEEE---TTE......EEEEEE------...........----EEEE-SS-TTTS-EEEEEEE.ETTEEEEEETTEEEEEEECSHHHGGGS-EECEEEEEEEE CS
  PF00722.16  18 ngekltltldkes.kveytsgglkskksylyGkvearik..aakgaGvvtafwlssede.wdqhdEIDiEflGndtgk......vqtnvygngkgg...........rtgekrlelwfdptedfHtYaieW.tpdkitwyVDgepvrtvkkkeaeeakyPqytpmnlavsl 166
                 +g +l++ +d    + ey +g +  ++    G ++a++     + +G+v+af++ s+d+   +hdEID+Ef  +  g       v+tnv+++ + +             +++r++   + +++ H+Y +e+ + ++i+w+VDg ++r+ ++        P+ + mn+ +s+
  MMETSP1325-20131115|4352_1 808 DG-NLVIAIDDWGnDAEYYGGCVYGQTLHGSGNYSATMApfSRTDTGFVSAFYMYSDDDdYYNHDEIDFEFRSQSYGSydsapcVWTNVFTDYNPDyhwgksedvclD-SDSRFNWDDQSQTEDHEYRLEYvQGEYIKWFVDGLLIREERDF------VPT-KKMNVRFSI 969
                 34.8888888855788888999999**************988999*********6644449***********99999999**********877777555544344321.577777666677899*****9736689**********986554......377.888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1075 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       606  (0.0443242); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.49u 0.35s 00:00:01.84 Elapsed: 00:00:00.97
# Mc/sec: 2655.76
//
Query:       MMETSP1325-20131115|4362_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|4365_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.33s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|4364_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-19   68.5   0.0    8.2e-19   68.0   0.0    1.3  1  PF00005.22 ABC transporter
    0.00083   18.5   0.0    0.00098   18.2   0.0    1.1  1  PF02463.14 RecF/RecN/SMC N terminal domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.0   0.0   1.2e-22   8.2e-19       6     118 .]       2     122 ..       1     122 [. 0.92

  Alignments for each domain:
  == domain 1    score: 68.0 bits;  conditional E-value: 1.2e-22
                 HHTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S--........-HHHHHHHHHH-..--HHHH------------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   6 lltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekk........tdkrieevlekv..gldelldksrvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 +l+++++  +g+i++d  ++d ++  le++r  ++ ipqdp lf   t+renld++ e+++        +++ ++e++e +  gl++++ +  ++++S Gq+q ++lArall+kpk+l++DE+t+
  MMETSP1325-20131115|4364_1   2 ALYRLVQLCKGTIYID--GHDTSQLGLETIRraLAIIPQDPVLF-VGTMRENLDAFGEYEDhelwtaidQTENLRETIEGLpdGLSSKVAE-GGENFSVGQRQLICLARALLRKPKILIMDEATA 122
                 688999999*******..677888889999999***********.************9988999999999999999999887778888888.*******************************96 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.4e-07   0.00098     113     210 ..      16     163 ..       5     170 .. 0.72

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 1.4e-07
                 E---EE-HHHHHHHHHCTT--TT......................................................G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEEE- CS
                 xxxxxxxxxxxxxxxxxxxxxxx......................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 113 ingkevtkkevaellesagiske......................................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadklvg 210
                 i+g++ ++  ++ + +   i ++                                                      ++S G+++L+ la        ++  + ++De  a++D    +++ ++++ek   + ++ i++r +++ ++dk++ 
  MMETSP1325-20131115|4364_1  16 IDGHDTSQLGLETIRRALAIIPQdpvlfvgtmrenldafgeyedhelwtaidqtenlretieglpdglsskvaeggeNFSVGQRQLICLARA----LLRKPKILIMDEATANIDLDTDNLIQKMVREKLGGCTILTIAHRLHTIMDSDKILV 163
                 555555555555555555555555666666666666666666666666666666666666666666666666666669999****9887644....455566899***************************************99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 1044.81
//
Query:       MMETSP1325-20131115|4360_1  [L=624]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-29  101.8   1.7    1.9e-28   99.1   0.4    2.7  2  PF06965.7 Na+/H+ antiporter 1


Domain annotation for each model (and alignments):
>> PF06965.7  Na+/H+ antiporter 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.08   1.1e+03      12      35 ..       7      29 ..       4      36 .. 0.73
   2 !   99.1   0.4   1.4e-32   1.9e-28      52     373 ..      85     524 ..      77     528 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.08
                --HHHHHHHHHHHHHH------HH CS
   PF06965.7 12 gillliaavlAlvlansalsesye 35
                ++ ll+ +vlAl+l n+  s++y+
  MMETSP1325-20131115|4360_1  7 ALPLLFGVVLALILENAD-SSWYT 29
                667899999999999985.44444 PP

  == domain 2    score: 99.1 bits;  conditional E-value: 1.4e-32
                 EEEHHHHHHHHHHHHHHHH---HHHHHHH-.---SSTTTSHHHHHHH-----TTHHHHGGG..........--SS......TTTT----SSS---HHHH---.-TT----S-SSSHHHHHHHHHHHH---HHHHHHHS--.....---TTT---HHHHHHHHHHHHH----.......----TTT---HH.HHHTTT---HHHH--------S---TT--....................................................................................................--HHHHHHHHHHHHHHHTHHHHHHHHH-------------TTTS----------------TTTTTTTSS-TTT-------GGGGTT---------HHHHHHHHHH----SSHHHHH--------TTS-- CS
   PF06965.7  52 elslkewindglmalFFllvglEikrelle.GeLrskkqallpviAalggmivPaliylll..........naed......pesvsGwaipaatDiAFalgv.lallgkrvPaslkifllalaivDDlgailiiAlfyse.....elslaalllallallvlallnrlgvr.......sllvylvlgvvl.WvavlksGvhatlagvilglliplkkkkse................................................................................................eeaesplerlehalhplvaflilPlFalanaGvslsgveldeltspltlgivlglvlGKpiGifllsflavklklaklpegiswkqilgvallaGigFtmslfiaeLafeseelleeaklgilvgslvsall 373
                 +l+l+   nd+lm++ F l   E+   ll  G+L+ +++a+ p++ ++gg + P  +y++l           +e+       e ++Gw+ ++atD+  a     +++g   Pa    +ll +a+  D   +++iA+fy +     +++ ++lll ++++++ ++l++ + r       ++l+y+vlg  l W+ + k+ +h+ la v +  ++p  ++k                                                                                                    ++  l+++e++++  v f  l  FalanaGv+l+g+ l ++       i+l+l++GK++G++ +  l+ +++    p g+   +i  ++l+a ++ t+slf+a++afe+e+++   k+g l++++v+ l+
  MMETSP1325-20131115|4360_1  85 SLTLHFVANDILMVFHFGLAMKEVTEALLPgGSLNPPSKAINPIMTTIGGSLGPIGVYFILlrlfieagmfDREQeaglgyDELMKGWGAVTATDVLLAWPTgRMVFGDGHPAID--YLLLMAVASDAIGMMVIAVFYPDpnshaAVEPVWLLLVIAGMACSFALRKWHYRkprithqNWLPYVVLGGTLsWIGFIKAHLHPSLALVPIVPFMPGPNRKVLedleeevehefedeavdghadeeiekarhsltkmpsfdgsadedvhvpeigdileehhdhgrgraltiqaglysgllghgvdnalkvqeydddgrlILHTTTLDEFEQFMKFPVDFG-LGFFALANAGVKLDGT-LGAM----AGLIILSLMIGKTLGVVIMYKLTKRFGYP-APFGVRGRHIRMIGLIASMSLTVSLFVADIAFEDESVKGDCKMGALLSAFVGVLC 524
                 67888999*****999999999***99986269************************98752222222222122211122245789*********988875525789**999865..5666788899999********7522222577788998888888888887655431111122699****987666****************887777776666446899***************************************************************************************999887788999************98.79************94.4433....3348899*******************986.699*******************************************988887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (624 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       557  (0.0407402); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.08u 0.40s 00:00:01.48 Elapsed: 00:00:00.64
# Mc/sec: 2336.45
//
Query:       MMETSP1325-20131115|4368_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.62
# Mc/sec: 401.97
//
Query:       MMETSP1325-20131115|4369_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-13   48.8   4.0     0.0015   17.5   0.0    4.4  4  PF00036.27 EF hand
    1.2e-12   46.4   0.2    0.00013   21.4   0.0    4.0  4  PF13405.1  EF-hand domain
    3.5e-12   46.1   1.0    8.1e-05   22.5   0.0    2.6  3  PF13499.1  EF-hand domain pair
    0.00028   19.9   0.5       0.05   12.8   0.0    2.9  2  PF13202.1  EF hand
     0.0038   16.6  11.8          4    7.0   0.7    4.4  4  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   5.6e-07    0.0015       1      18 [.      11      28 ..      11      38 .. 0.88
   2 ?    3.4   0.0     0.018        48      16      28 ..      70      82 ..      65      83 .. 0.82
   3 !   13.9   0.0     8e-06     0.022       2      28 ..      89     115 ..      88     116 .. 0.90
   4 !   12.4   0.2   2.3e-05     0.064       4      28 ..     130     154 ..     128     155 .. 0.93

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 5.6e-07
                HHHHHHHHHCTTTSSEBE CS
  PF00036.27  1 elkeaFkefDkDgdGkIs 18
                e k+aF++fD+Dg+G I+
  MMETSP1325-20131115|4369_1 11 EYKNAFAIFDRDGSGSIE 28
                679*************97 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.018
                EBEHHHHHHHHHH CS
  PF00036.27 16 kIsfeEfkealkk 28
                 ++ ++f++++++
  MMETSP1325-20131115|4369_1 70 ALTEDDFVAMMAE 82
                6899*******85 PP

  == domain 3    score: 13.9 bits;  conditional E-value: 8e-06
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++eaF+ +D Dg+G +  +  k+++++
  MMETSP1325-20131115|4369_1  89 FREAFAALDEDGNGWVPASSIKDLMRE 115
                 79*************999999999986 PP

  == domain 4    score: 12.4 bits;  conditional E-value: 2.3e-05
                 HHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkealkk 28 
                 ++++ fD    G+I++e f++++++
  MMETSP1325-20131115|4369_1 130 KMMQRFDIGEEGHIDYEAFVNLMMS 154
                 8**********************87 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   4.9e-08   0.00013       1      27 [.      11      37 ..      11      44 .. 0.91
   2 ?    0.2   0.0      0.31   8.5e+02      14      26 ..      68      80 ..      66      83 .. 0.81
   3 !   17.7   0.0   7.4e-07     0.002       2      27 ..      89     114 ..      88     122 .. 0.93
   4 ?    1.4   0.0      0.13   3.6e+02       7      27 ..     133     153 ..     127     156 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 4.9e-08
                HHH---GCC-------B---HHHHHHH CS
   PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLr 27
                e++ aF +fD+dg+G i+  E++++L+
  MMETSP1325-20131115|4369_1 11 EYKNAFAIFDRDGSGSIESWEIKRVLN 37
                5789*********************98 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.31
                ---B---HHHHHH CS
   PF13405.1 14 dGkidaeELrdaL 26
                +  ++ +++++++
  MMETSP1325-20131115|4369_1 68 NTALTEDDFVAMM 80
                55799*****998 PP

  == domain 3    score: 17.7 bits;  conditional E-value: 7.4e-07
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 +reaF ++D dg+G + a+ ++d++r
  MMETSP1325-20131115|4369_1  89 FREAFAALDEDGNGWVPASSIKDLMR 114
                 8***********************99 PP

  == domain 4    score: 1.4 bits;  conditional E-value: 0.13
                 GCC-------B---HHHHHHH CS
   PF13405.1   7 klfDkdgdGkidaeELrdaLr 27 
                 + fD    G id e +++++ 
  MMETSP1325-20131115|4369_1 133 QRFDIGEEGHIDYEAFVNLMM 153
                 56888889*****99999886 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0     3e-08   8.1e-05       2      66 .]      12      80 ..      11      80 .. 0.85
   2 !   21.5   0.1   6.1e-08   0.00017       3      66 .]      90     152 ..      88     152 .. 0.87
   3 ?    4.4   0.0     0.014        37       8      31 ..     134     157 ..     130     159 .. 0.79

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 3e-08
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels..deevrevldyifkelDkn..gdGvlsfeEflqai 66
                +k aF  +D+dg+g+++  e++r+l+      s  +e++++ + + ++ ++    g+  l+ ++f++++
  MMETSP1325-20131115|4369_1 12 YKNAFAIFDRDGSGSIESWEIKRVLNLQAAGASrrREMSDDDILDMINXANPEisGNTALTEDDFVAMM 80
                6789********************8754444335599999999999**9999988888*******9987 PP

  == domain 2    score: 21.5 bits;  conditional E-value: 6.1e-08
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgsels...deevrevldyifkelDkngdGvlsfeEflqai 66 
                 +eaF +lD dg+g++    ++ l++ +++e     d ++ ++    ++++D    G +++e f++++
  MMETSP1325-20131115|4369_1  90 REAFAALDEDGNGWVPASSIKDLMREFNEESDvmsDINMVKM----MQRFDIGEEGHIDYEAFVNLM 152
                 789************************988767555555557....***************999876 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.014
   PF13499.1   8 llDkdgdgyldkeeLlrllkhlgs 31 
                 ++D    g++d+e +++l+  +g+
  MMETSP1325-20131115|4369_1 134 RFDIGEEGHIDYEAFVNLMMSTGE 157
                 567777899999999999998884 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   1.8e-05      0.05       4      23 ..      15      34 ..      12      36 .. 0.80
   2 !    4.4   0.1    0.0086        23       2      14 ..      90     102 ..      89     102 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.8e-05
                HHHHH--S----B-HHHHHH CS
   PF13202.1  4 tFrafDlNgDGkIsreELkr 23
                +F  fD +g+G I   E kr
  MMETSP1325-20131115|4369_1 15 AFAIFDRDGSGSIESWEIKR 34
                5************8766666 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0086
                 HHHHHHH--S--- CS
   PF13202.1   2 kdtFrafDlNgDG 14 
                 +++F a+D +g G
  MMETSP1325-20131115|4369_1  90 REAFAALDEDGNG 102
                 567********98 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0015       4.2      31      44 ..      16      29 ..      10      39 .. 0.79
   2 !    6.0   0.2    0.0028       7.8      20      52 ..      44      81 ..      31      83 .. 0.72
   3 ?    2.2   0.1     0.044   1.2e+02      27      40 ..      89     102 ..      86     115 .. 0.83
   4 !    7.0   0.7    0.0015         4      22      51 ..     123     152 ..     106     155 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0015
   PF13833.1 31 frefDtdgdGkisf 44
                f  fD+dg+G i  
  MMETSP1325-20131115|4369_1 16 FAIFDRDGSGSIES 29
                899*******9965 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0028
   PF13833.1 20 kg...lseeevdilfrefDtdgdG..kisfeEFcvlle 52
                ++   +s++++ ++++ +  + +G  ++++++F+++++
  MMETSP1325-20131115|4369_1 44 SRrreMSDDDILDMINXANPEISGntALTEDDFVAMMA 81
                4455688888888888887766664479********97 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.044
   PF13833.1  27 vdilfrefDtdgdG 40 
                 +++ f ++D dg+G
  MMETSP1325-20131115|4369_1  89 FREAFAALDEDGNG 102
                 567799*******9 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.0015
   PF13833.1  22 lseeevdilfrefDtdgdGkisfeEFcvll 51 
                 +s+  +  ++  fD+   G i++e F++l+
  MMETSP1325-20131115|4369_1 123 MSDINMVKMMQRFDIGEEGHIDYEAFVNLM 152
                 555566679*******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.61
# Mc/sec: 632.48
//
Query:       MMETSP1325-20131115|4363_1  [L=408]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00034   20.2   0.2    0.00059   19.5   0.1    1.4  1  PF00787.19 PX domain


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   4.3e-08   0.00059      15      57 ..     301     342 ..     287     398 .. 0.68

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 4.3e-08
                 .CETSSEEEEEEEECS-SCEEEEEEEHHHHHHHHHHHHHHTT.T CS
  PF00787.19  15 gskkhsyylievelktgakewtvkRrYsdFeeLhskLlrkfp.r 57 
                 g+  h+ +l+ v  ++  +++ v+RrYs+F eL + L   ++ r
  MMETSP1325-20131115|4363_1 301 GGQTHAEFLVVVNIGS--FTFGVWRRYSEFRELAESLAVSKEkR 342
                 5777888888888886..5******************9887752 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.40s 00:00:01.10 Elapsed: 00:00:00.61
# Mc/sec: 1602.81
//
Query:       MMETSP1325-20131115|4366_1  [L=384]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1411  (0.103204); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.62
# Mc/sec: 1484.20
//
Query:       MMETSP1325-20131115|4370_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-09   35.9   0.0    1.3e-08   34.6   0.0    1.8  1  PF00583.19 Acetyltransferase (GNAT) family
    8.1e-09   35.4   0.0      3e-08   33.6   0.0    1.9  1  PF13508.1  Acetyltransferase (GNAT) domain
    4.3e-05   23.4   0.0    0.00022   21.1   0.0    2.0  2  PF13673.1  Acetyltransferase (GNAT) domain
    0.00059   19.4   0.0      0.001   18.6   0.0    1.4  1  PF08445.5  FR47-like protein
  ------ inclusion threshold ------
      0.011   15.4   0.0      0.062   13.0   0.0    2.0  2  PF13527.1  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> PF00583.19  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   4.6e-12   1.3e-08      22      83 .]     174     238 ..     115     238 .. 0.71

  Alignments for each domain:
  == domain 1    score: 34.6 bits;  conditional E-value: 4.6e-12
                 S......TTEEEEEEEEESGGGTTTT-HHHHHHHHHHHHHHTTHSEEEEEEETTCHHHHHHHHHTT-E CS
  PF00583.19  22 a......ertayieglaVspeyrgqGiGkaLleallekarerglerielevesgndraiklYeklGFk 83 
                         ++a++e+++V+p  +g+G+G++ l+a+l++a +    +  +    + +r + +Y +lGFk
  MMETSP1325-20131115|4370_1 174 IraavgdRPVAHLERMCVAPHTQGMGVGTKALKAALDEAVR---AGWVVLLATQEERNVVFYSRLGFK 238
                 034455579********************************...666666777777788********7 PP

>> PF13508.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   1.1e-11     3e-08      26      78 ..     183     238 ..     112     239 .. 0.70

  Alignments for each domain:
  == domain 1    score: 33.6 bits;  conditional E-value: 1.1e-11
   PF13508.1  26 tayiggvavdpeyrgkGlGskllnkl.keeygekpivlla..rparkkFYeklGFk 78 
                  a++++++v+p+ +g G+G+k l+ +  e  +   +vlla  +++ + FY +lGFk
  MMETSP1325-20131115|4370_1 183 VAHLERMCVAPHTQGMGVGTKALKAAlDEAVRAGWVVLLAtqEERNVVFYSRLGFK 238
                 3499*********************9445557777788764256789********8 PP

>> PF13673.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.43   1.2e+03      44      62 ..     110     128 ..      85     163 .. 0.67
   2 !   21.1   0.0   8.1e-08   0.00022      51     117 .]     170     237 ..     157     237 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.43
   PF13673.1  44 stivvaerggevvGfaglk 62 
                 ++  v +++g++v+f ++ 
  MMETSP1325-20131115|4370_1 110 CNRCVFDEEGRLVCFFMFV 128
                 6677889999999998864 PP

  == domain 2    score: 21.1 bits;  conditional E-value: 8.1e-08
   PF13673.1  51 rggevvGfaglkpdaslsllyvrpeargrGigraLldaieaea.rkgikvltteasklarplyerlGf 117
                 +++e+ +++g  p a+l   +v+p  +g+G+g++ l+a+++ea r+g  vl ++ + +   +y rlGf
  MMETSP1325-20131115|4370_1 170 VENEIRAAVGDRPVAHLERMCVAPHTQGMGVGTKALKAALDEAvRAGWVVLLATQEERNVVFYSRLGF 237
                 67888899999999*******************9999999987577*********************9 PP

>> PF08445.5  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   3.7e-07     0.001       8      83 ..     170     243 ..     166     246 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 3.7e-07
                 ----EEEEEE--TT------EE-GGG--------HHHHHHHHHH---S-EEEEEETT-HHHHHHHHH---B----E CS
   PF08445.5   8 elgelaawilrkdggelgalqvlpehrrrGlgsrlvkalakeiaergktvllvvvasNtpsirlyeklGfekieet 83 
                   +e+ a +  +++  l  ++v p  +++G g++  ka   e +++g   +++ ++++++   +y++lGf+  +++
  MMETSP1325-20131115|4370_1 170 VENEIRAAVGDRPVAHLERMCVAPHTQGMGVGTKALKAALDEAVRAGW--VVLLATQEERNVVFYSRLGFKTVRKE 243
                 556677777789999*****************9887777777777775..555667788999********998765 PP

>> PF13527.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.24   6.5e+02      36      62 ..      99     130 ..      53     164 .. 0.53
   2 ?   13.0   0.0   2.3e-05     0.062      71     128 .]     181     240 ..     170     240 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.24
   PF13527.1  36 rnlleegrvlgaed.....ngklvgqlallpf 62 
                 r+ +e  +  g+ +     +g+lv+ +++++ 
  MMETSP1325-20131115|4370_1  99 RRNFEMRDGTGCNRcvfdeEGRLVCFFMFVSP 130
                 33333333333333333358888887777665 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 2.3e-05
   PF13527.1  71 lpaagvtgVatapehrgrgllrkLlarlleemrergqplsilfP...ssypiYrrfGyeia 128
                  p+a+++ +++ap  +g g+ +k l+++l+e+     ++++l     +++ +Y r+G++++
  MMETSP1325-20131115|4370_1 181 RPVAHLERMCVAPHTQGMGVGTKALKAALDEAVR-AGWVVLLATqeeRNVVFYSRLGFKTV 240
                 58999**************************995.4455555555667789*******975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.31s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1330.74
//
Query:       MMETSP1325-20131115|4367_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-13   48.6   4.6    0.00017   21.2   0.0    5.4  5  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   5.7e-06     0.078      16      39 .]       2      26 ..       1      26 [. 0.85
   2 !    6.4   0.0   0.00056       7.6      13      30 ..      44      61 ..      42      65 .. 0.79
   3 !   21.2   0.0   1.2e-08   0.00017      13      39 .]     102     128 ..      97     128 .. 0.94
   4 ?    0.8   0.0     0.033   4.5e+02      11      26 ..     142     157 ..     135     159 .. 0.84
   5 !    4.0   0.0    0.0032        43       8      30 ..     251     273 ..     247     282 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.7e-06
                EEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27 16 cvafspd.gpllasgSrDgtirlWd 39
                ++a +p+ + l a++++Dg +r+W+
  MMETSP1325-20131115|4367_1  2 SLATHPTdPDLYATAGDDGAVRVWS 26
                566777778899************7 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.00056
                SEEEEEEESSSTEEEEEE CS
  PF00400.27 13 pVtcvafspdgpllasgS 30
                +++++a+ pdg+ l+ g+
  MMETSP1325-20131115|4367_1 44 AIRAMAWYPDGSGLVVGC 61
                79********77777776 PP

  == domain 3    score: 21.2 bits;  conditional E-value: 1.2e-08
                 SEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  13 pVtcvafspdgpllasgSrDgtirlWd 39 
                 p+t++af+pdg+++a +S+D+ +++ d
  MMETSP1325-20131115|4367_1 102 PITDIAFCPDGSMFAIASEDCRVYIHD 128
                 79*********************9976 PP

  == domain 4    score: 0.8 bits;  conditional E-value: 0.033
                 SSSEEEEEEESSSTEE CS
  PF00400.27  11 tspVtcvafspdgpll 26 
                 tsp +++++s d ++l
  MMETSP1325-20131115|4367_1 142 TSPSRSLDWSTDAKYL 157
                 78899*****997776 PP

  == domain 5    score: 4.0 bits;  conditional E-value: 0.0032
                 ESSSSSEEEEEEESSSTEEEEEE CS
  PF00400.27   8 rgHtspVtcvafspdgpllasgS 30 
                 +gH   V  v+f+ d ++l++++
  MMETSP1325-20131115|4367_1 251 EGHATHVAKVRFNADDSRLITCG 273
                 589999999******88888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 1607.56
//
Query:       MMETSP1325-20131115|4371_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.082   12.2   1.4      0.079   12.2   1.0    1.0  1  PF06810.6 Phage minor structural protein GP20


Domain annotation for each model (and alignments):
>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.0   5.8e-06     0.079      23      51 ..       9      37 ..       3      44 .] 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.8e-06
   PF06810.6 23 dkaeeeldslkeqlkerdkqiedLkkkvk 51
                ++ ++ + ++k ql++ dk i dLk++  
  MMETSP1325-20131115|4371_1  9 KTENKAKPNMKAQLTQQDKAILDLKASRD 37
                445778899****************9764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.27u 0.46s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 181.79
//
Query:       MMETSP1325-20131115|4373_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.44s 00:00:00.84 Elapsed: 00:00:00.68
# Mc/sec: 676.62
//
Query:       MMETSP1325-20131115|4372_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-10   41.1   0.1    1.9e-06   28.2   0.4    2.7  3  PF13432.1  Tetratricopeptide repeat
    6.6e-10   38.3   0.4    2.5e-05   23.6   0.3    2.8  3  PF13414.1  TPR repeat
    1.5e-08   33.8   0.1       0.54   10.1   0.0    4.0  4  PF07719.12 Tetratricopeptide repeat
    2.1e-07   30.6   2.8     0.0013   18.4   1.3    3.0  3  PF13424.1  Tetratricopeptide repeat
      6e-06   26.3   0.4       0.18   12.4   0.0    3.3  3  PF13428.1  Tetratricopeptide repeat
    2.4e-05   24.0   0.2      0.018   15.1   0.1    3.4  3  PF13431.1  Tetratricopeptide repeat
    0.00012   21.5   0.0        3.9    7.3   0.0    3.7  4  PF13181.1  Tetratricopeptide repeat
    0.00035   19.9   0.2        5.5    6.6   0.0    4.0  4  PF00515.23 Tetratricopeptide repeat
     0.0065   16.6   2.8      0.088   13.1   0.1    2.9  2  PF07721.9  Tetratricopeptide repeat
     0.0071   14.8   0.6     0.0084   14.5   0.4    1.1  1  PF04348.8  LppC putative lipoprotein
     0.0073   15.2   0.2      0.015   14.3   0.1    1.5  1  PF13429.1  Tetratricopeptide repeat
     0.0096   14.5   0.1       0.76    8.3   0.0    2.8  3  PF12569.3  NMDA receptor-regulated protein 1
  ------ inclusion threshold ------
      0.017   15.1   0.1       0.29   11.1   0.2    2.3  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      0.062   12.1   0.2      0.079   11.7   0.1    1.2  1  PF04910.9  Transcriptional repressor TCF25
      0.086   11.7   0.4        0.3    9.9   0.1    2.0  2  PF02259.18 FAT domain
       0.19   11.6   1.8        4.7    7.1   0.1    2.7  3  PF13374.1  Tetratricopeptide repeat
       0.19   12.1   0.7         57    4.3   0.1    3.2  3  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0    0.0022       1.7      19      64 ..       3      48 ..       1      49 [. 0.92
   2 !   28.2   0.4   2.3e-09   1.9e-06       1      57 [.      53     112 ..      53     117 .. 0.91
   3 ?   -1.2   0.0       4.1   3.3e+03       3      24 ..     138     159 ..     136     161 .] 0.73

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0022
   PF13432.1 19 aleaalalaPeaaeallllaeallrlgrldeAaallraalalaPdd 64
                +l++++   P+ +ea+l  a a +  ++l+ A + +++ l+l+P++
  MMETSP1325-20131115|4372_1  3 VLNKVVSMVPGLVEAHLVTAKANFGINQLEVAQRTINRCLELDPSY 48
                688899999************************9999999***986 PP

  == domain 2    score: 28.2 bits;  conditional E-value: 2.3e-09
   PF13432.1   1 lalArallraGdydeAlaaleaalala...PeaaeallllaeallrlgrldeAaallraa 57 
                 l lA+ +l +++ + A + le+al ++      + ++l +a++l ++g+ d A+  l++a
  MMETSP1325-20131115|4372_1  53 LLLAQIALVQQNHRLANQSLEQALSYNfqiRSSPTYHLVRAQVLSEQGDTDLALGQLQEA 112
                 579************************99988**********************666665 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 4.1
   PF13432.1   3 lArallraGdydeAlaaleaal 24 
                  A+ l ++ ++ eA a+ ++a+
  MMETSP1325-20131115|4372_1 138 MANVLGKLSRVSEAKAIVDEAR 159
                 5777777888888888887776 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.4   1.6e-07   0.00013       8      67 ..      20      78 ..      13      79 .. 0.87
   2 !   23.6   0.3   3.1e-08   2.5e-05       8      67 ..      54     115 ..      52     117 .. 0.92
   3 ?    0.9   0.0       0.4   3.2e+02       2      28 ..     131     157 ..     130     161 .] 0.58

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 1.6e-07
   PF13414.1  8 elGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                  + a f  ++++ A +  +++leldp++ + ++ lA++ l +  + + A + +e+Al++
  MMETSP1325-20131115|4372_1 20 VTAKANFGINQLEVAQRTINRCLELDPSYSDGHLLLAQIALVQQ-NHRLANQSLEQALSY 78
                556667778899999999************************86.679**********86 PP

  == domain 2    score: 23.6 bits;  conditional E-value: 3.1e-08
   PF13414.1   8 elGnalfkegdydeAieayekAleld...pnnaelyynlAlaylklgkdyeeAledyekAlel 67 
                  l++ ++ ++++  A + +e+Al+++    +++ +++ +A+++ ++g d + Al  +++A+el
  MMETSP1325-20131115|4372_1  54 LLAQIALVQQNHRLANQSLEQALSYNfqiRSSPTYHLVRAQVLSEQG-DTDLALGQLQEAMEL 115
                 68999999*****************9777889***************.69***********98 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.4
   PF13414.1   2 nAealkelGnalfkegdydeAieayek 28 
                 +A+ + e++n+l k+ +  eA +  ++
  MMETSP1325-20131115|4372_1 131 RADIFVEMANVLGKLSRVSEAKAIVDE 157
                 566666677777666666666554444 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0034       2.7       2      33 ..      16      47 ..      15      48 .. 0.88
   2 !    9.7   0.1   0.00094      0.76       3      31 ..      51      79 ..      49      81 .. 0.92
   3 !   10.1   0.0   0.00067      0.54       3      30 ..      88     115 ..      86     115 .. 0.85
   4 ?    1.0   0.0      0.55   4.4e+02       3      28 ..     134     159 ..     132     161 .] 0.79

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0034
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldPn 33
                ea+   ++a +  +++e A +  +++leldP 
  MMETSP1325-20131115|4372_1 16 EAHLVTAKANFGINQLEVAQRTINRCLELDPS 47
                67777889999999*****************7 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00094
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleld 31
                ++ +l+++++ ++++  A + +e+Al+++
  MMETSP1325-20131115|4372_1 51 GHLLLAQIALVQQNHRLANQSLEQALSYN 79
                7899**********************987 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 0.00067
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAlel 30 
                 ++  +++++ ++gd + Al  +++A el
  MMETSP1325-20131115|4372_1  88 YHLVRAQVLSEQGDTDLALGQLQEAMEL 115
                 6778999999999999999999999887 PP

  == domain 4    score: 1.0 bits;  conditional E-value: 0.55
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAl 28 
                 +  ++++++ kl +  eA++  ++A 
  MMETSP1325-20131115|4372_1 134 IFVEMANVLGKLSRVSEAKAIVDEAR 159
                 6678899999999999**99888775 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.7    0.0048       3.8      20      73 ..      30      76 ..      12      79 .. 0.51
   2 !   18.4   1.3   1.6e-06    0.0013       7      67 ..      51     114 ..      45     115 .. 0.84
   3 !   17.6   0.0   3.1e-06    0.0025       6      72 ..      87     158 ..      83     161 .] 0.85

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0048
   PF13424.1 20 dydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAl 73
                +++ A+  ++++lel  ++ d h+ +a +        l ++++  A + le+Al
  MMETSP1325-20131115|4372_1 30 QLEVAQRTINRCLELDPSYSDGHLLLAQI-------ALVQQNHRLANQSLEQAL 76
                55666666666666655555555544433.......222333333333333332 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 1.6e-06
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalel.lrel..gddhpdtaralnnlanlylalgdydeAle 67 
                  +  la++ + ++++  A + +e+al   ++    +  h+ +a +l + +++ lalg+++eA e
  MMETSP1325-20131115|4372_1  51 GHLLLAQIALVQQNHRLANQSLEQALSYnFQIRssPTYHLVRAQVLSEQGDTDLALGQLQEAME 114
                 57889***********************987653355788889999999999999999999976 PP

  == domain 3    score: 17.6 bits;  conditional E-value: 3.1e-06
   PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalel..lrelgdd...hpdtaralnnlanlylalgdydeAleylekA 72 
                 t++   a+vl ++gd d Al  +++a+el  +r+  d+     ++a++  ++an++ +l + +eA++   +A
  MMETSP1325-20131115|4372_1  87 TYHLVRAQVLSEQGDTDLALGQLQEAMELpgIRVGMDEsvsVVQRADIFVEMANVLGKLSRVSEAKAIVDEA 158
                 678889***********************9666554533436799********************9987777 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   0.00022      0.18       4      44 .]      18      58 ..      14      58 .. 0.85
   2 ?    4.6   0.0     0.071        57       3      29 ..      51      77 ..      49      81 .. 0.91
   3 !   10.1   0.0    0.0012      0.97       5      29 ..      90     114 ..      86     117 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00022
   PF13428.1  4 llalarallalGdpdeAiallrralalaPddaealllLarl 44
                +l  a a +  ++++ A +  +r l+l+P+  + +llLa++
  MMETSP1325-20131115|4372_1 18 HLVTAKANFGINQLEVAQRTINRCLELDPSYSDGHLLLAQI 58
                55556666777899*************************96 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.071
   PF13428.1  3 allalarallalGdpdeAiallrrala 29
                 +l+la++ l ++++  A + l++al+
  MMETSP1325-20131115|4372_1 51 GHLLLAQIALVQQNHRLANQSLEQALS 77
                5789********************996 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 0.0012
   PF13428.1   5 lalarallalGdpdeAiallrrala 29 
                 l +a++l ++Gd+d A+ +l++a +
  MMETSP1325-20131115|4372_1  90 LVRAQVLSEQGDTDLALGQLQEAME 114
                 6689*****************9965 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   2.2e-05     0.018       3      32 ..      39      68 ..      37      76 .. 0.87
   2 ?    4.5   0.0     0.054        43      15      33 ..      88     106 ..      72     112 .. 0.81
   3 ?    0.3   0.0       1.2   9.6e+02      13      33 ..     132     152 ..     130     153 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.2e-05
   PF13431.1  3 ekaleldPnnadaynnLAelllnnGdleeA 32
                +++leldP ++d +  LA++ l +++++ A
  MMETSP1325-20131115|4372_1 39 NRCLELDPSYSDGHLLLAQIALVQQNHRLA 68
                79******************9988777655 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.054
   PF13431.1  15 aynnLAelllnnGdleeAe 33 
                  +  +A++l+++Gd++ A+
  MMETSP1325-20131115|4372_1  88 YHLVRAQVLSEQGDTDLAL 106
                 445789********99885 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 1.2
   PF13431.1  13 adaynnLAelllnnGdleeAe 33 
                 ad + ++A++l ++ +  eA+
  MMETSP1325-20131115|4372_1 132 ADIFVEMANVLGKLSRVSEAK 152
                 788999*****9999988887 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.24   1.9e+02      15      33 ..      29      47 ..      16      48 .. 0.77
   2 !    7.3   0.0    0.0049         4       4      31 ..      52      79 ..      49      81 .. 0.91
   3 !    7.3   0.0    0.0049       3.9       3      30 ..      88     115 ..      86     119 .. 0.87
   4 ?   -2.0   0.0       4.4   3.6e+03       6      22 ..     137     153 ..     132     158 .. 0.71

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.24
                T-HHHHHHHHH---HHHH. CS
   PF13181.1 15 GdydkAkeylekalelkpr 33
                ++ + A    +++lel+p 
  MMETSP1325-20131115|4372_1 29 NQLEVAQRTINRCLELDPS 47
                66677888889******95 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0049
                TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1  4 yynlGdiYrqlGdydkAkeylekalelk 31
                +++l++i +   ++ +A ++le+al+++
  MMETSP1325-20131115|4372_1 52 HLLLAQIALVQQNHRLANQSLEQALSYN 79
                78999999999***************96 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.0049
                 -TTT---HHHHTT-HHHHHHHHH---HH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalel 30 
                 +++ +++++ + Gd+d+A+  l++a el
  MMETSP1325-20131115|4372_1  88 YHLVRAQVLSEQGDTDLALGQLQEAMEL 115
                 567899************9999999887 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 4.4
                 T---HHHHTT-HHHHHH CS
   PF13181.1   6 nlGdiYrqlGdydkAke 22 
                 +++ ++ +l + ++Ak+
  MMETSP1325-20131115|4372_1 137 EMANVLGKLSRVSEAKA 153
                 56777778888888876 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.046        37      25      34 .]      39      48 ..      28      48 .. 0.90
   2 ?    3.0   0.1     0.091        73       2      31 ..      50      79 ..      49      80 .. 0.88
   3 !    6.6   0.0    0.0068       5.5       6      30 ..      91     115 ..      86     115 .. 0.87
   4 ?    1.0   0.0      0.39   3.2e+02       1      21 [.     132     152 ..     132     158 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.046
                HHHHHHHTTH CS
  PF00515.23 25 ekALelnPnn 34
                +++Lel+P++
  MMETSP1325-20131115|4372_1 39 NRCLELDPSY 48
                79******97 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.091
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALeln 31
                + +  l+++ l ++++  A +  e+AL+ n
  MMETSP1325-20131115|4372_1 50 DGHLLLAQIALVQQNHRLANQSLEQALSYN 79
                568899*************99999999865 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0068
                 HHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   6 nlGnaylklgkydeAleyyekALel 30 
                  +++++ ++g+ d Al   ++A el
  MMETSP1325-20131115|4372_1  91 VRAQVLSEQGDTDLALGQLQEAMEL 115
                 6899************999999886 PP

  == domain 4    score: 1.0 bits;  conditional E-value: 0.39
                 HHHHHHHHHHHHHTT-HHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAl 21 
                 a+++  ++n++ kl +  eA 
  MMETSP1325-20131115|4372_1 132 ADIFVEMANVLGKLSRVSEAK 152
                 6677889*******9999996 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.3      0.26   2.1e+02       4      25 ..      52      73 ..      50      74 .. 0.82
   2 !   13.1   0.1   0.00011     0.088       3      25 ..      88     110 ..      86     113 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.26
                H---HHHHHH-------HHHHH CS
   PF07721.9  4 llaLArallalGdldeAralle 25
                +l+LA+ +l + ++  A + le
  MMETSP1325-20131115|4372_1 52 HLLLAQIALVQQNHRLANQSLE 73
                899********99988866666 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00011
                 HH---HHHHHH-------HHHHH CS
   PF07721.9   3 allaLArallalGdldeAralle 25 
                  +l++A++l ++Gd d A+  l+
  MMETSP1325-20131115|4372_1  88 YHLVRAQVLSEQGDTDLALGQLQ 110
                 799***************98776 PP

>> PF04348.8  LppC putative lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4     1e-05    0.0084      28     114 ..      19     102 ..      15     131 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1e-05
   PF04348.8  28 llAarvlieenkiaqaqallrelavqeLtdeqkldkslleaelaaakeqneeAlqqlslqsls.eLspsqksryyelraailearkda 114
                 l  a++ +  n+++ aq  +++    eL + +  d  ll a++a+++++ + A+q l+ q+ls +        y+ +ra++l  ++d+
  MMETSP1325-20131115|4372_1  19 LVTAKANFGINQLEVAQRTINRCL--ELDP-SYSDGHLLLAQIALVQQNHRLANQSLE-QALSyNFQIRSSPTYHLVRAQVLSEQGDT 102
                 566777778888888999999888..8877.567999*********************.44441555566667999******999885 PP

>> PF13429.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   1.8e-05     0.015     131     176 ..      70     116 ..      48     120 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.8e-05
   PF13429.1 131 ellaslee.keaaeqsalfllaraellrqegqkkkAlrllrralalk 176
                 + l+++ + + ++++s+++ l+ra++l+++g+++ Al +l++a++l+
  MMETSP1325-20131115|4372_1  70 QSLEQALSyNFQIRSSPTYHLVRAQVLSEQGDTDLALGQLQEAMELP 116
                 44555443255788*****************************9987 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.011       9.2     209     255 ..      29      75 ..      16      81 .. 0.71
   2 !    8.3   0.0   0.00094      0.76     209     258 ..      70     115 ..      52     118 .. 0.70
   3 ?    0.5   0.0      0.21   1.7e+02     230     257 ..     133     160 ..     122     161 .] 0.63

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.011
   PF12569.3 209 gsrekaleyidkaiehtptlvelymtkarilkhaGdlekAaelmeea 255
                 ++ e a ++i++++e +p+  + ++  a+i   + + + A + +e+a
  MMETSP1325-20131115|4372_1  29 NQLEVAQRTINRCLELDPSYSDGHLLLAQIALVQQNHRLANQSLEQA 75 
                 45667777777777777777777777777776666666666666665 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00094
   PF12569.3 209 gsrekaleyidkaiehtptlvelymtkarilkhaGdlekAaelmeearkl 258
                 +s e+al+y + +i+++pt   +++++a++l ++Gd++ A   ++ea +l
  MMETSP1325-20131115|4372_1  70 QSLEQALSY-NFQIRSSPT---YHLVRAQVLSEQGDTDLALGQLQEAMEL 115
                 334455555.555666666...9*****************9999999776 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.21
   PF12569.3 230 elymtkarilkhaGdlekAaelmeeark 257
                 ++++  a++l +   +++A ++++ear+
  MMETSP1325-20131115|4372_1 133 DIFVEMANVLGKLSRVSEAKAIVDEARS 160
                 5666666666666666666666666666 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0059       4.7      27      83 ..      18      74 ..       3      75 .. 0.79
   2 ?   11.1   0.2   0.00036      0.29      10      83 ..      36     111 ..      29     115 .. 0.76
   3 ?    4.8   0.0     0.033        27      26      80 ..      87     154 ..      76     158 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0059
                CHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2 27 ylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83
                +l+  A++ +  ++ + A   +++ leld+s  + ++llA+ +l ++ +  A + Le+
  MMETSP1325-20131115|4372_1 18 HLV-TAKANFGINQLEVAQRTINRcLELDPSYSDGHLLLAQIALVQQNHRLANQSLEQ 74
                444.5888888888888999998899****98899**********9999999999886 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00036
                 HHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC....TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2  10 flaekllaespkdpedaylyalAlclylngeykrAyellrk....leldssslgcryllArcllklgkydeAiavLek 83 
                   +++ l+++p+  +d +l+ lA+  + +++++ A + l++    + +  ss++++++ A++l ++g+ d A+  L++
  MMETSP1325-20131115|4372_1  36 RTINRCLELDPS-YSDGHLL-LAQIALVQQNHRLANQSLEQalsyNFQIRSSPTYHLVRAQVLSEQGDTDLALGQLQE 111
                 556777788874.2455555.7*************999999988444444668999999*******999999988776 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.033
                 HCHHHHHHHHHH---HHHHHHHHHC............TSHCH.CBHHHHHHH.HHHHHHTT-HHHHCCC CS
   PF12895.2  26 aylyalAlclylngeykrAyellrk............lelds.sslgcryll.ArcllklgkydeAiav 80 
                 +y +  A++l ++g+ + A+  l++            + ++  +  +  ++  A +l kl++++eA a+
  MMETSP1325-20131115|4372_1  87 TYHLVRAQVLSEQGDTDLALGQLQEamelpgirvgmdESVSVvQ-RADIFVEmANVLGKLSRVSEAKAI 154
                 47777899999999998888888777766665544433333312.233334447777777777777665 PP

>> PF04910.9  Transcriptional repressor TCF25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   9.9e-05     0.079      27      75 ..      36      85 ..      19     100 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.9e-05
   PF04910.9 27 ealvnllkkyPYHvdtLlqlsevyreqgdfevAndlieraL.filervfh 75
                  ++++l+  P + d+ l l++++  q+++  An+ +e+aL + ++    
  MMETSP1325-20131115|4372_1 36 RTINRCLELDPSYSDGHLLLAQIALVQQNHRLANQSLEQALsYNFQIRSS 85
                5789999999*******************************666765555 PP

>> PF02259.18  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00037       0.3     152     212 ..      55     114 ..      22     128 .. 0.89
   2 ?   -1.3   0.0      0.97   7.8e+02      17      57 ..     122     160 ..     118     161 .] 0.56

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00037
  PF02259.18 152 fanlcRksgrlslAeksLkellgedkseeddlpqvtyaylkylWakgeqeeAlqkLrefts 212
                 +a+++  + +  lA++sL ++l ++ +  + +p  ++ ++++l ++g+++ Al +L+e  +
  MMETSP1325-20131115|4372_1  55 LAQIALVQQNHRLANQSLEQALSYNFQIRS-SPTYHLVRAQVLSEQGDTDLALGQLQEAME 114
                 6889999999************99966666.9*************************9766 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.97
  PF02259.18  17 meeylssmkeespdrsffqallal.hrnqfeeaeeyIdkare 57 
                 m+e +s+++++    ++ +    l + ++ +ea+ ++d+ar+
  MMETSP1325-20131115|4372_1 122 MDESVSVVQRADIFVEMANV---LgKLSRVSEAKAIVDEARS 160
                 55555555544442233333...2444777788888888886 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       5.6   4.5e+03      25      31 ..      72      78 ..      55      79 .. 0.63
   2 ?    7.1   0.1    0.0059       4.7       9      30 ..      93     114 ..      87     115 .. 0.89
   3 ?    3.2   0.0     0.097        78       8      30 ..     138     160 ..     132     161 .] 0.87

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 5.6
   PF13374.1 25 eeealai 31
                +e+al++
  MMETSP1325-20131115|4372_1 72 LEQALSY 78
                5666665 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0059
   PF13374.1   9 AlalrargryeeAlaleeeala 30 
                 A +l+++g+++ Al  ++ea++
  MMETSP1325-20131115|4372_1  93 AQVLSEQGDTDLALGQLQEAME 114
                 789****************987 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.097
   PF13374.1   8 LAlalrargryeeAlaleeeala 30 
                  A++l ++ r  eA a++ ea++
  MMETSP1325-20131115|4372_1 138 MANVLGKLSRVSEAKAIVDEARS 160
                 79****************99975 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       3.9   3.1e+03       7      31 ..      22      46 ..      16      47 .. 0.71
   2 ?    4.3   0.1     0.071        57       2      28 ..      51      77 ..      50      79 .. 0.85
   3 ?    4.2   0.0     0.076        61       7      26 ..      93     112 ..      89     115 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 3.9
                HHHHHHHHHHHHHHHHHHHHHHH-T CS
   PF13174.1  7 alsyyklgdtdeAlealerlikeyP 31
                a++ +  ++ + A ++ +r+++  P
  MMETSP1325-20131115|4372_1 22 AKANFGINQLEVAQRTINRCLELDP 46
                6666764588888999888888766 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.071
                HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  2 AlyklalsyyklgdtdeAlealerlik 28
                  ++la++ + +++++ A + le+ ++
  MMETSP1325-20131115|4372_1 51 GHLLLAQIALVQQNHRLANQSLEQALS 77
                5789999999877**********9886 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.076
                 HHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   7 alsyyklgdtdeAlealerl 26 
                 a+++ ++gdtd Al  l++ 
  MMETSP1325-20131115|4372_1  93 AQVLSEQGDTDLALGQLQEA 112
                 78888999*****9999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.39u 0.51s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 741.95
//
Query:       MMETSP1325-20131115|4375_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 365.99
//
Query:       MMETSP1325-20131115|4374_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 727.95
//
Query:       MMETSP1325-20131115|4376_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   13.3   0.0       0.11   13.0   0.0    1.1  1  PF06877.6 Protein of unknown function (DUF1260)


Domain annotation for each model (and alignments):
>> PF06877.6  Protein of unknown function (DUF1260)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.7e-06      0.11      12      77 ..       2      69 ..       1      80 [. 0.90

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7.7e-06
   PF06877.6 12 aLledGddlskpyeiehhfvfedeedlekaaeeleksgyevesaees..eedgegvwcldveremtld 77
                +++e G+ +  ++e e  f  e+e+d ++aa++ +    ev+ ++e+  eedg+++ + ++++++  d
  MMETSP1325-20131115|4376_1  2 QIEEGGISPLLSHEYESPFGTENEDDGRSAADWRKGGRSEVQGDKEEteEEDGDDITIGNASQVELSD 69
                6889999999********************************9999999999****999999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 426.02
//
Query:       MMETSP1325-20131115|4377_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.001   18.2   0.0     0.0012   17.9   0.0    1.1  1  PF01026.16 TatD related DNase
  ------ inclusion threshold ------
      0.051   12.9   1.5      0.062   12.6   1.0    1.2  1  PF05387.6  Chorion family 3


Domain annotation for each model (and alignments):
>> PF01026.16  TatD related DNase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.8e-07    0.0012     172     252 ..      18      98 ..      11     102 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.8e-07
                 --B-----TT-TT....T-S....HHHHHHHS-GGGB-----TTSS-----------GGGHHHHHHHHHHH-SS-HHHHHHHHHHHHHH CS
  PF01026.16 172 yyislsglltfkn....akk....lrelvkavpldrlLiETDaPyltpkpyrgkrnepanvayvveklaelkgltleevaaitaeNakr 252
                 +y+++s +++       ++k    l ++++avp dr++iE+D           +     + a+ v  +a+++g++ e+ a +ta+N  +
  MMETSP1325-20131115|4377_1  18 IYFGFSYTVNVAMggseGSKgreiLNSAIRAVPADRIMIESDVS--------SDHDTHRACARAVGLVATARGWSYEHAAITTARNGMA 98 
                 57777777776665333444555566666*************52........2444556667777778888999998888888888655 PP

>> PF05387.6  Chorion family 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.0     9e-06     0.062      22      73 ..       2      52 ..       1      73 [. 0.72

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 9e-06
   PF05387.6 22 sagggGGkGsgdlgagasagleelvnaaaGGaassgGaiegadaeivaspee 73
                ++gggGG+G +  + +   g+   vn+a+GG + s G  + + a i a p++
  MMETSP1325-20131115|4377_1  2 GSGGGGGGGRSAPACAIYFGFSYTVNVAMGGSEGSKGREILNSA-IRAVPAD 52
                4567777777777777788****************987665444.4455544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 487.83
//
Query:       MMETSP1325-20131115|4378_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 786.01
//
Query:       MMETSP1325-20131115|4379_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   13.5   0.0      0.021   13.3   0.0    1.0  1  PF02119.11 Flagellar P-ring protein


Domain annotation for each model (and alignments):
>> PF02119.11  Flagellar P-ring protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.5e-06     0.021     205     249 ..      11      56 ..       7      59 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.5e-06
  PF02119.11 205 peeaeqrveflaelenlevep.dakakvvinertGtivigedvris 249
                 p++ +++v+f+ +le l++    +++k ++++++G++v++++v+++
  MMETSP1325-20131115|4379_1  11 PKHLRDPVRFVIRLEALRLARhVEHPKRLVDAADGVVVCDGEVSLD 56 
                 778889*************9988999999**************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.60
# Mc/sec: 247.62
//
Query:       MMETSP1325-20131115|4382_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00088   18.8   0.0     0.0013   18.3   0.0    1.3  1  PF05047.11 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain


Domain annotation for each model (and alignments):
>> PF05047.11  Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   9.5e-08    0.0013       1      33 [.      28      60 ..      28      84 .. 0.94

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 9.5e-08
  PF05047.11  1 aRkFwrknLprlkyhNPavpivvkrrsgdgPal 33
                +R F+ +n+ ++   NP++++++++ ++ +P++
  MMETSP1325-20131115|4382_1 28 TRAFVLNNYHEFTDLNPSFKFMIREADEIEPSI 60
                59*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 729.33
//
Query:       MMETSP1325-20131115|4385_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       604  (0.0441779); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.66
# Mc/sec: 577.30
//
Query:       MMETSP1325-20131115|4381_1  [L=489]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-38  131.5   0.0    4.2e-38  130.9   0.0    1.1  1  PF00067.17 Cytochrome P450
      0.003   15.9   0.5     0.0042   15.5   0.4    1.1  1  PF01150.12 GDA1/CD39 (nucleoside phosphatase) family


Domain annotation for each model (and alignments):
>> PF00067.17  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.9   0.0   6.2e-42   4.2e-38     260     439 ..     125     317 ..     113     335 .. 0.91

  Alignments for each domain:
  == domain 1    score: 130.9 bits;  conditional E-value: 6.2e-42
                 HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHC.CCTS--HHHHTTS-HHHHHHHHHHHHHS-SSSTEEEEE-SS-EECT..T.......EEE-TT-EEEEETTTHHT-TTTS.SSTTS--GGGGC-STT...-C.SCCTT--TT-----S----HHHHHHHHHHHHHHHHHEEEEETC CS
  PF00067.17 260 deelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevl.gdkreptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvir..g.......ylipkGtevivnlyalhrdpevf.pnPeeFdpeRFldekg...nskrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqp 439
                  +el at+ ++ +a+ +  +s+++ a+++  + ++v++k++eE+d+v+ + + e+  +   ++ y+ avi E++R   ++   ++Re+ +d++++  g        +i++Gt+v ++++a+h +++v+ ++ eeF+p+R+l e++     k+   af+PF+aG+R C+G+ +  m +k+++a++++ +e+e  +
  MMETSP1325-20131115|4381_1 125 TNELIATAANFVVAAAESPASGMAHAMALVCESKDVMAKIKEEVDTVMdKYNGEMNKEFCRDMVYTSAVIDEAFRVKAPAT-MVSREAIEDCELPikGtgknaetIKIKAGTKVNLCIHAVHLNKDVWgEDCEEFKPDRWLGENAktgGAKGGGQAFMPFSAGARGCPGKAITVMWMKVLFAMVFHSYEMEEAS 317
                 46899*******************************************88888****************************.999******998644355778899***************************************999445999************************************9755 PP

>> PF01150.12  GDA1/CD39 (nucleoside phosphatase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.4   6.2e-07    0.0042     266     410 ..      81     216 ..      39     232 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 6.2e-07
  PF01150.12 266 kvfkirgkgnyeqCsksikellnknkvcneeqClfngvhapsidaeqkkigassyfyttgdflklvsevevakkekltkkikeacs..esweqikssakktkeknvseelkeacfklayvlslLhdgFsldkeveliqsvkkieese 410
                 ++ +  ++  +e C++ ++ +l+++ +c+e +C f   +a +      +  + + + t+ +f+   +e+   ++  +++++  +c+    +++ik++++ + +k+  e  ke+c +  y   ++ + F +++    + s + ie+ e
  MMETSP1325-20131115|4381_1  81 NDHESYSSCVWEPCKVAVEWALKNSDKCPE-TCGFSKMMAQG------FSDTNELIATAANFVVAAAES---PASGMAHAMALVCEskDVMAKIKEEVDTVMDKYNGEMNKEFCRDMVYTSAVIDEAFRVKAP-ATMVSREAIEDCE 216
                 4556667889*************99***95.8***9999988......555566666777777778888...999999999999997556799***********999889******************99988.6666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.32s 00:00:01.13 Elapsed: 00:00:00.86
# Mc/sec: 1362.58
//
Query:       MMETSP1325-20131115|4387_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-23   82.9   0.0    2.4e-23   82.8   0.0    1.0  1  PF00450.17 Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> PF00450.17  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.8   0.0   1.8e-27   2.4e-23     327     417 ..       2      95 ..       1      96 [. 0.94

  Alignments for each domain:
  == domain 1    score: 82.8 bits;  conditional E-value: 1.8e-27
                 HHHHTT--EEEEE----STT-----HHHHCC--STTHHHHHHS--B.B..TT-SB---EEEETTEEEEE-------HHHH-HHHHHHHHHHHH- CS
  PF00450.17 327 kllesglrvliysGdvDlicnflgteawikklnlsgkkefrpwevs.l..edgqvaGyvkeyrnltfltvkgaGHmvpedqPeaalqmikrfls 417
                 +ll++g+ vl+y+G+ D+icn+lg++aw+++l +s ++e+ ++  + +   +g++aG + + +++tfl+v +aGHmvp dqPe+al+m+ + ++
  MMETSP1325-20131115|4387_1   2 DLLDGGIDVLVYAGEFDFICNWLGNKAWTQTLSWSRANEYANAVNTtWttASGEIAGSYLSGGGMTFLKVFDAGHMVPRDQPEKALDMVLKHVN 95 
                 68999************************************999987467**************************************977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.63
# Mc/sec: 384.18
//
Query:       MMETSP1325-20131115|4386_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-20   73.7   8.8    1.8e-20   73.5   6.1    1.2  1  PF02156.10 Glycosyl hydrolase family 26


Domain annotation for each model (and alignments):
>> PF02156.10  Glycosyl hydrolase family 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.5   6.1   1.3e-24   1.8e-20     152     284 ..       2     143 ..       1     194 [. 0.77

  Alignments for each domain:
  == domain 1    score: 73.5 bits;  conditional E-value: 1.3e-24
                 -EEEE-S-S-----S-----ST.....CHHHHHHHHHHHHHHHHHCT----SEEEE---BTTSS-T.CCC...-----S-SEE-EE---S-GCC-HHHHHHHHCT-CHCCCCCCHHH---EEHHHCCCCCHHHHC.EECCHSG CS
  PF02156.10 152 pvlfRplHEanGeWFWWGakgy.....erpeaykklwkllyerlvdtrglnnliwvyspdnsrdva.eaf...yPgdeyvDivglDiYaedaassadaynelvalkkakklvelteanGsipdsevikeikikyp.yFsiwad 284
                 p++fR++HE++G+W+WWG ++y        ++yk l+    +++    g++n++w y+p +  d+  +af   yPg++ +Div++D Y +d   + d  ++++++ + +   +l  a+G+   s+ i+++  +y  ++ +  +
  MMETSP1325-20131115|4386_1   2 PIIFRLFHENTGGWYWWGVDSYddvqtCSDDEYKALFNFTQDYIH-DAGVHNILWEYAPAKPSDDYdSAFydrYPGSDRIDIVAFDRYSTDSDYKDDVLSDCQTVAEWAENHNLLAAIGETGISSGIQDETSSYKdWYYTDFG 143
                 9*********************77655455678888888888865.57**********988766540455888*****************98888888777777655444444444455555566888888888777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 940.79
//
Query:       MMETSP1325-20131115|4388_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.3   0.2      0.014   14.8   0.1    1.2  1  PF10812.3  Protein of unknown function (DUF2561)
      0.099   12.1   0.2      0.099   12.1   0.1    2.2  2  PF04420.9  CHD5-like protein
       0.56    9.8   6.9        1.1    8.9   4.8    1.4  1  PF07226.6  Protein of unknown function (DUF1422)
        8.3    4.7  13.1       0.28    9.5   3.9    2.1  3  PF04791.11 LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> PF10812.3  Protein of unknown function (DUF2561)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   4.2e-06     0.014      85     201 ..       7     121 ..       2     126 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 4.2e-06
   PF10812.3  85 LraRraaeaepaarsvklarrage.svragaaearaekesvavekaparteagelsseavdriWLRgtvaltaalGvaliavaaatyLmavghdgasWvaYglagvvtlgmvviewly 201
                 +r Rr+a++e  + + k++r a+  +++++ +++   + ++      ++   + l+se++dr++L  +  +++ +  + ++  ++ +L  v++ + sW  Y    + t+++v i +++
  MMETSP1325-20131115|4388_1   7 MRYRRVAQNEEEIEERKRKRDAAVdQISTKIQAMFWVSLAAF-VVYMTDLPRTVLESEKIDRVYLNIS--IVCLVINSCLIFYLTVWLPYVQKITLSWEVYCPRVIPTVTVVGILFFF 121
                 689***********9999999988456666555555555555.56677888899***********755..55555566677788999999***********98888888888776665 PP

>> PF04420.9  CHD5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   2.9e-05     0.099      73     115 ..      10      52 ..       2      58 .. 0.90
   2 ?   -0.2   0.6      0.18   6.1e+02      97     128 ..      69     100 ..      53     130 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHXXXXXXXXXXXX CS
   PF04420.9  73 Rkldklekeleklkkelkaqkekfkkvlkklrlllttvlfivl 115
                 R++ + e+e+e+ k +++a+ +++++ ++ +++++++++ +++
  MMETSP1325-20131115|4388_1  10 RRVAQNEEEIEERKRKRDAAVDQISTKIQAMFWVSLAAFVVYM 52 
                 999999******************************9988765 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.18
                 HHHHHHHXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04420.9  97 kkvlkklrlllttvlfivlklwyrktpvfklp 128
                    ++++ l++ + l+++l +w  +   ++l+
  MMETSP1325-20131115|4388_1  69 YLNISIVCLVINSCLIFYLTVWLPYVQKITLS 100
                 45578888888888999999887666655555 PP

>> PF07226.6  Protein of unknown function (DUF1422)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.8   0.00031       1.1      28     105 ..      69     144 ..      64     152 .. 0.91

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00031
   PF07226.6  28 altssvvafsifplialvLavyalyqeYlkkaleeglpllalacfllGvllysalvraeyPeiGsnflplvlvlvlvl 105
                  l  s+v   i + + + L+v+  y +  + + e  +p +  ++ ++G+l + ++++a +P  G  fl+ ++vlvl +
  MMETSP1325-20131115|4388_1  69 YLNISIVCLVINSCLIFYLTVWLPYVQKITLSWEVYCPRVIPTVTVVGILFFFTVLKALWPVYG--FLSPLIVLVLFM 144
                 578899********************************************************99..898888888764 PP

>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.18   6.1e+02     194     222 ..       8      36 ..       2      53 .. 0.63
   2 ?    9.5   3.9   8.2e-05      0.28     118     174 ..      67     121 ..      59     130 .. 0.88
   3 ?   -0.9   0.1      0.12     4e+02     319     347 ..     128     156 ..     121     173 .. 0.65

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.18
  PF04791.11 194 reekaekledekeeaessvddilesvdrl 222
                 r+ + ++ e+e ee + + d+ +++++  
  MMETSP1325-20131115|4388_1   8 RYRRVAQNEEEIEERKRKRDAAVDQISTK 36 
                 56666666666666666666666666544 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 8.2e-05
  PF04791.11 118 rvyeavvyllllalvllvllavisavldnsesllslwevflplvyScvsflGllLll 174
                 rvy +  ++++++ +  +l+ ++ + l + ++ + +wev+ p v+  v+++G+l++ 
  MMETSP1325-20131115|4388_1  67 RVYLN--ISIVCLVINSCLIFYLTVWLPYVQKITLSWEVYCPRVIPTVTVVGILFFF 121
                 55544..678899999************************************99875 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.12
  PF04791.11 319 lLvltflsillvvtntlsllvvvselpll 347
                 + v+ fls l+v+++++ +l+  + +p +
  MMETSP1325-20131115|4388_1 128 WPVYGFLSPLIVLVLFMGFLFSTHFIPGG 156
                 44556666677777777777776666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1086  (0.0794324); expected 273.4 (0.02)
Passed bias filter:                      656  (0.0479813); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 1007.45
//
Query:       MMETSP1325-20131115|4389_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-08   32.5   0.0    5.3e-08   32.2   0.0    1.1  1  PF01079.15 Hint module
  ------ inclusion threshold ------
      0.063   12.4   0.0      0.086   12.0   0.0    1.3  1  PF09995.4  Uncharacterized protein conserved in bacteria (DUF2236)


Domain annotation for each model (and alignments):
>> PF01079.15  Hint module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   7.8e-12   5.3e-08      75     174 ..      49     155 ..      42     173 .. 0.88

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 7.8e-12
                 XXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX CS
  PF01079.15  75 ekltlTaaHLifvaesekeeseee.....eavfAskvrkgdyvlvekekskklrpskVvsvsteektGvyAPLTehGtivVdgvlascYavies..hslahtafapl 174
                 +++tl++aH+i+v  +e+e++ee      +   A++vr+gd +l  + +++  +p++V +++  +++   A   ++  ++Vd++ as Y  ++    +++h+ f+ +
  MMETSP1325-20131115|4389_1  49 TSITLSHAHFIYVFPEEEESDEEGkmaapKLLHARDVRAGDRLLHYDPSTAVSKPVRVARIEPDVRRTKRAFFLSSPYVLVDNISASPYMGFDPaiAEWQHALFSLV 155
                 789**********999988887778999999**************9*******************************************999862246788887766 PP

>> PF09995.4  Uncharacterized protein conserved in bacteria (DUF2236)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.3e-05     0.086      68     108 ..     102     156 ..      60     162 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.3e-05
   PF09995.4  68 laarVrlmHasvrgtlpd..............GepynaldpelllWvhatfsllf 108
                   +rV ++  +vr+t ++                py  +dp ++ W ha fsl++
  MMETSP1325-20131115|4389_1 102 KPVRVARIEPDVRRTKRAfflsspyvlvdnisASPYMGFDPAIAEWQHALFSLVA 156
                 55799999999***9666999999999999999*******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 881.86
//
Query:       MMETSP1325-20131115|4383_1  [L=669]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-71  240.2   0.0    2.3e-71  239.6   0.0    1.2  1  PF01761.15 3-dehydroquinate synthase
    3.5e-09   36.2   0.0    6.4e-09   35.3   0.0    1.5  1  PF13685.1  Iron-containing alcohol dehydrogenase
     0.0078   14.7   0.6      0.024   13.1   0.4    1.7  1  PF00465.14 Iron-containing alcohol dehydrogenase
  ------ inclusion threshold ------
      0.051   12.0   0.0      0.082   11.3   0.0    1.2  1  PF12097.3  Protein of unknown function (DUF3573)


Domain annotation for each model (and alignments):
>> PF01761.15  3-dehydroquinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.6   0.0   6.9e-75   2.3e-71       2     255 ..     310     565 ..     309     570 .. 0.96

  Alignments for each domain:
  == domain 1    score: 239.6 bits;  conditional E-value: 6.9e-75
                 EEE----TTSSCCCHHHHHHHHHCSS--TT-EEEEE----TTT----HHHHTT---EEEE---SHHHHHCTT------BB-------B------SEEEEEGGGGCCS-HHHHH---HHHHHHHHTT-HHHHHHHHHCCHHCHH--THCCHHHHHHHHHHHHHHHHHHTTT----GGGGG-------CCCHHCTT.....TS----TTT---HHHHHHHHH-----HHHHHHHHHHHHH-----STT-H--HHHHHHHHT CS
  PF01761.15   2 lvvpdgEksKsletlekllealleaklerksliialGGGvvgDlaGfvAatylRGvrfiqvPTtllaqvDssvGgKtginlpegKNliGaFyqPkaVlidlevLktlpkrelraGlaEviKyaliadaelfelleeeaeallkekeeealeeliarsvevkaevveeDekekglralLnlGHtigHaiEallgy.....kllHGeaVaiGmvlaaelseklgllkeeeverllkllkklglptslkelldveellealk 255
                 +v+pdgE+ K+le++ kl + +l+ +++++s++i+lGGG+v +++Gf+A+t++RG+ +i+ PTtllaq D+s++ K+++n p+gKNl+G++y P  +++d++vL+tl++  l +G++E++K+al++da+l+++le+ +  l   +++  l+++++r++e+k ev+  D+ke+++  +L +GHt+gH iE++++       l+HG+aVaiG v+aa+++  +gl++e+ +er+++l++k++lp  ++ + +v++++++l 
  MMETSP1325-20131115|4383_1 310 IVLPDGEDAKTLEVYGKLADHVLSIGIDKSSVLISLGGGAVANVCGFIASTLHRGIGLIHFPTTLLAQCDASISHKQAVNAPHGKNLVGSYYAPIRIVVDTDVLQTLEDWLLPDGMGEILKHALCQDADLLKYLEDYDGPL---NDPVFLDYVVRRTIELKCEVIDIDPKENKEAVVLIYGHTLGHPIESISHRmgtacCLSHGQAVAIGCVIAARVAVLMGLADESIIERTEQLCAKYELPYLIPCDQSVDRIMAKLP 565
                 789**************************************************************************************************************************************9777...4799******************************************988766667799**********************************************99999998875 PP

>> PF13685.1  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.9e-12   6.4e-09      20     168 ..     278     434 ..     261     513 .. 0.82

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 1.9e-12
   PF13685.1  20 kkvlvvadentykaagekveeslkeagveve..vleeleeeadleaveklvealrekdad...lvvavGsGtinDlaKyvsakl..gkpyisvpTa..aSmDGyaspgasltvdngkkktlspaklPiaiiaDldiikkAPkrliasGfGDllgkita 168
                 + ++v++de++++++g++ ++ ++e g+ ++  vl + e+ ++le   kl++++ + ++d   +++++G+G +  ++ +++++l  g+ +i +pT+  a  D+  s + ++   +gk+    +  +Pi i++D+d++++  + l+  G+G++l    +
  MMETSP1325-20131115|4383_1 278 SPLFVFTDETVNELYGDAFVQGFEEMGYVMHkiVLPDGEDAKTLEVYGKLADHVLSIGIDkssVLISLGGGAVANVCGFIASTLhrGIGLIHFPTTllAQCDASISHKQAVNAPHGKNLVG-SYYAPIRIVVDTDVLQTLEDWLLPDGMGEILKHALC 434
                 6789************************99965566677778999999999999764444444******************97611567899***95457899999999999986666544.5678************99999999999888876655 PP

>> PF00465.14  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.4   7.1e-06     0.024      80     328 ..     340     548 ..     269     559 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.1e-06
                 -EEE------HHHHHHHHHHHTT...................--BEE--SS..-S-S-TT-SEEEEE-----EE.EEEE-S.--SEEE--HHHHHHS-HHHHH-----HHHHHHHHHHH.....--.---.....HHHHHHHHHHHHHHH.HH----HH.HHHH.HHHHTT....-----------HHHHHH---G-GGGS----TTT--HHHHH.............................HTTHHHHHHHHHHHHTT-- CS
  PF00465.14  80 dvivAvGGGsviDtAKaiallltnpgelldyegkakkkkkpalpliaiPTt..aGtGsevtplavitdeetkrklslaspkllPdlaivDpeltltlPkrvtaatglDalthaiEayvs.....kk.anp.....lsdalaeeairliaenlpravadp.edleareqmllastlAGlafsnaglgaaHalahalgglfgipHGeavaillpavlrfnaeaaperyarlaralgvdsegsdeealaeeliealrellkelglp 328
                  v++ +GGG v  ++  ia +l+ +                 + li  PTt  a  ++ +++   +   + + k  ++s+   P  ++vD++++ tl   ++ ++++ +l ha+ + +      ++   p     + d + ++ i+l +e ++    dp e+ e    + ++ tl+         + + +++h +g  + ++HG+avai+ +  +            r+a ++g++          e++ie+ ++l+++  lp
  MMETSP1325-20131115|4383_1 340 SVLISLGGGAVANVCGFIASTLHRG-----------------IGLIHFPTTllAQCDASISHKQAVN--APHGKNLVGSYY-APIRIVVDTDVLQTLEDWLLPDGMGEILKHALCQDADllkylEDyDGPlndpvFLDYVVRRTIELKCEVIDI---DPkENKE-AVVLIYGHTLG---------HPIESISHRMGTACCLSHGQAVAIGCVIAA------------RVAVLMGLA---------DESIIERTEQLCAKYELP 548
                 6899999999999999999999943.................8899999983233456666666666..444554455555.8******************************98888777776334566222234445555555555553333...2324433.33344444444.........7799*********************88777............566666544.........356777777777777776 PP

>> PF12097.3  Protein of unknown function (DUF3573)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.4e-05     0.082      37      93 ..     152     207 ..     125     236 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.4e-05
   PF12097.3  37 elidkkeilkLqkqikelqaqinqleeqkksnessefatysskveddtlvgvgetkk 93 
                 +  ++ke+++L++q++  +a+i+qle++ +  es +f t  s+++++ l+g +  ++
  MMETSP1325-20131115|4383_1 152 NDHEAKELAELRHQLALAKARIAQLEKI-ELGESKDFNTPDSDLNESQLLGRQMCRE 207
                 667889**********************.99***************98777665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (669 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.07u 0.40s 00:00:01.47 Elapsed: 00:00:00.72
# Mc/sec: 2226.62
//
Query:       MMETSP1325-20131115|4391_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 681.32
//
Query:       MMETSP1325-20131115|4390_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-41  141.4   0.0    2.6e-41  141.1   0.0    1.1  1  PF00121.13 Triosephosphate isomerase


Domain annotation for each model (and alignments):
>> PF00121.13  Triosephosphate isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.1   0.0   1.9e-45   2.6e-41     121     242 ..       2     123 ..       1     125 [. 0.98

  Alignments for each domain:
  == domain 1    score: 141.1 bits;  conditional E-value: 1.9e-45
                 EEEESCEHHHHHTTHHHHHHHHHHHHHHHTSSTGGGGGEEEEEEEGGG------HHHHHHHHHHHHHHHHHHHHTHHHHHCCSEEE------TTTHHHHHTSTT----EE-HGTTSCHHHHH CS
  PF00121.13 121 vlCvgEtleereagktkevlkeqlkailekldeealknliiAYePvwAIGtgkvatpeeaqevhaairkelaekfskevaeevrilyGGsvnaenakellkqkdvdGlLvGgaslkaesfla 242
                 +lC+gEt+ee+eag  +++++ q+++ l+++++e+++n++iAYePvwAIGtg v+ ++ aqevh  ir+ la+++++eva+++ri+yGGsv+++ + +l++++d+dG LvGgasl++ +f a
  MMETSP1325-20131115|4390_1   2 ILCIGETKEEYEAGLCQAICAVQIAKDLDGVSKEDMANVVIAYEPVWAIGTGLVCPSDVAQEVHVGIREFLAKMYDQEVADATRIQYGGSVTPDSVDDLMSKPDIDGCLVGGASLDPAKFXA 123
                 9**********************************************************************************************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.53
# Mc/sec: 972.11
//
Query:       MMETSP1325-20131115|4392_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-40  133.8   4.4    1.2e-09   37.0   0.0    4.4  4  PF01239.17 Protein prenyltransferase alpha subunit repeat
  ------ inclusion threshold ------
      0.066   12.6   0.0       0.11   11.9   0.0    1.3  1  PF03332.8  Eukaryotic phosphomannomutase
       0.29   10.4  10.9       0.72    9.2   2.6    3.7  3  PF13961.1  Domain of unknown function (DUF4219)


Domain annotation for each model (and alignments):
>> PF01239.17  Protein prenyltransferase alpha subunit repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   6.3e-13   2.9e-09       1      31 []       4      34 ..       4      34 .. 0.95
   2 !   37.0   0.0   2.6e-13   1.2e-09       1      30 [.      39      68 ..      39      69 .. 0.95
   3 !   35.9   0.2   5.7e-13   2.6e-09       3      30 ..      75     102 ..      73     103 .. 0.93
   4 !   24.3   0.0   2.7e-09   1.2e-05       2      29 ..     108     135 ..     107     137 .. 0.94

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 6.3e-13
  PF01239.17  1 eELelteklieldpkNysaWnyRrwlleklg 31
                + L+lt ++ie++p Ny+aW++Rr +le lg
  MMETSP1325-20131115|4392_1  4 RALDLTAEVIENNPANYTAWQFRRRCLEALG 34
                68*************************9985 PP

  == domain 2    score: 37.0 bits;  conditional E-value: 2.6e-13
  PF01239.17  1 eELelteklieldpkNysaWnyRrwllekl 30
                +EL++te+++ + pkNy++W++Rr +++ l
  MMETSP1325-20131115|4392_1 39 KELRYTEEKAYDTPKNYQIWFHRRAIVQTL 68
                6**************************988 PP

  == domain 3    score: 35.9 bits;  conditional E-value: 5.7e-13
  PF01239.17   3 LelteklieldpkNysaWnyRrwllekl 30 
                 L+++++++++d kNy+aW++R+w+l+ +
  MMETSP1325-20131115|4392_1  75 LQFVSNVLLEDGKNYHAWSHRQWVLKTY 102
                 9************************876 PP

  == domain 4    score: 24.3 bits;  conditional E-value: 2.7e-09
  PF01239.17   2 ELelteklieldpkNysaWnyRrwllek 29 
                 EL+ +++l+ +d +N+saWn R +++e+
  MMETSP1325-20131115|4392_1 108 ELDVVDELLTQDVRNNSAWNQRWFVIEN 135
                 9*********************999998 PP

>> PF03332.8  Eukaryotic phosphomannomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.4e-05      0.11     160     219 ..      22      82 ..      18      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.4e-05
                 ---.GGGGGGGTTT----EEEEE-----------HHHHSTTEE----SSHHHHHHHH.HHH CS
   PF03332.8 160 gWd.ktyclqhvekdsfdeihffGdktaeGGndyeifadprtighsvtspedtvkkleell 219
                 +W+ ++ cl+ + +d ++e+ +  +k+++   +y+i+ + r+i +++  p    + ++++l
  MMETSP1325-20131115|4392_1  22 AWQfRRRCLEALGSDLYKELRYTEEKAYDTPKNYQIWFHRRAIVQTLGDPASDLQFVSNVL 82 
                 6764678**************************************9999988888887776 PP

>> PF13961.1  Domain of unknown function (DUF4219)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1     0.054   2.5e+02       5      12 ..      19      26 ..      16      26 .. 0.83
   2 ?    2.3   0.0     0.023     1e+02       4       9 ..      53      58 ..      51      61 .. 0.86
   3 ?    9.2   2.6   0.00016      0.72       2      24 ..      85     106 ..      85     106 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.054
   PF13961.1  5 NYdvWkir 12
                NY+ W +r
  MMETSP1325-20131115|4392_1 19 NYTAWQFR 26
                *****776 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.023
   PF13961.1  4 tNYdvW 9 
                +NY++W
  MMETSP1325-20131115|4392_1 53 KNYQIW 58
                6***** PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.00016
   PF13961.1   2 dGtNYdvWkirMksyLqaqdlWd 24 
                 dG+NY+ W++r ++ L++ +lW+
  MMETSP1325-20131115|4392_1  85 DGKNYHAWSHR-QWVLKTYNLWE 106
                 8**********.99999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 741.95
//
Query:       MMETSP1325-20131115|4394_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-15   56.5   0.0    2.8e-15   56.1   0.0    1.2  1  PF00471.15 Ribosomal protein L33


Domain annotation for each model (and alignments):
>> PF00471.15  Ribosomal protein L33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.1   0.0     2e-19   2.8e-15       4      48 .]      33      77 ..      30      77 .. 0.97

  Alignments for each domain:
  == domain 1    score: 56.1 bits;  conditional E-value: 2e-19
  PF00471.15  4 itLeCtecggrnYtttKNkrntperLelkKfcpkcrkhtlhkEiK 48
                ++L +t+++g++Y+t+KN+r+ + +L+++K++p++++h+++ E+K
  MMETSP1325-20131115|4394_1 33 VKLLSTAGTGFFYMTRKNPRQIQHKLQFRKYDPVVQQHVMFAETK 77
                89******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 421.97
//
Query:       MMETSP1325-20131115|4393_1  [L=369]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 1607.74
//
Query:       MMETSP1325-20131115|4395_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 640.66
//
Query:       MMETSP1325-20131115|4399_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|4398_1  [L=437]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-12   45.8   0.0    5.5e-12   45.2   0.0    1.2  1  PF00069.20 Protein kinase domain
    1.7e-05   23.9   0.0    2.5e-05   23.4   0.0    1.2  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   8.1e-16   5.5e-12     136     256 ..      15     180 ..       7     182 .. 0.88

  Alignments for each domain:
  == domain 1    score: 45.2 bits;  conditional E-value: 8.1e-16
                 -EEE------EEE....CEESS-CSS----GGGS-HHHHH..................................TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH.......HHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20 136 elkiaDFGlakkl....eksseklttlvgtreYmAPEvll..................................kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks.......eelkdlikkllekdpakRltaeeilk 256
                 ++++aDFG a+++      s+ +l+   gt+   +PE+ll                                  ++++ + ++DvWs+G++lyellt +++++ +++e   +++   l+k++ e   + + +        ++l+ l+++ll ++pa+R++a+++++
  MMETSP1325-20131115|4398_1  15 SMCLADFGEACVVeagrVASGMRLQRARGTECIQSPEMLLvhtsaapemaeepssaesateaestapataavstRRQYVSCASDVWSMGCLLYELLTAQFLYDITETEGGWARLFVMLTKSNAELFLERQLELlrtlpmaDQLETLLRQLLVRNPANRPSAKDVIQ 180
                 569********99999888999****************9999*******************************99999*************************8877777777777776655555554444447789999**********************9976 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   3.7e-09   2.5e-05     163     257 ..      74     180 ..      60     182 .. 0.81

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 3.7e-09
                 TT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GT............TTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12 163 eeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgesp............ypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeRptfkelve 257
                 +ea+     +a  s +++ ++ +sDvWs G+ll+E++t                 +  l+++++  +l+++ +l +   + ++l++l++q + ++p++Rp+ k++++
  MMETSP1325-20131115|4398_1  74 TEAESTAPATAAVSTRRQYVSCASDVWSMGCLLYELLTAQFLYditeteggwarlFVMLTKSNAELFLERQLELLRTLPMADQLETLLRQLLVRNPANRPSAKDVIQ 180
                 45555555567777888889******************65444777888888886666677777788899999****************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.54
# Mc/sec: 1939.27
//
Query:       MMETSP1325-20131115|4397_1  [L=903]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-69  232.6   0.1      5e-69  232.2   0.1    1.1  1  PF00069.20 Protein kinase domain
    6.7e-41  139.9   0.1    9.4e-41  139.5   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    4.7e-29  100.5   0.1    2.3e-13   50.1   0.0    2.5  2  PF00169.24 PH domain
  ------ inclusion threshold ------
      0.033   13.1   0.0      0.058   12.3   0.0    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
       0.07   12.7   0.0       0.14   11.7   0.0    1.4  1  PF01636.18 Phosphotransferase enzyme family
        0.1   12.6   0.0       0.23   11.5   0.0    1.5  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.2   0.1   2.2e-72     5e-69       2     260 .]     475     736 ..     474     736 .. 0.95

  Alignments for each domain:
  == domain 1    score: 232.2 bits;  conditional E-value: 2.2e-72
                 EEEEEEE----EEEEEEEETTCCE...EEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE..CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--.....HHHHHTSGGH CS
  PF00069.20   2 elleklGsGsfGkVykakkkktgk...kvAvKilkkeeekskkektavr.ElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl..eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRlt.....aeeilkhpwl 260
                 +l++ +G+G+fGkV+ ++kk   +   ++AvK+l k+    kk+ ++++ E kil +++Hp+iv+l  +f+++d+lylv++y++gg+lf +l+k++++ e+ ++++a +++ ++e+lH++gii+rDLK eNiL+d++g++ ++DFGl+k+   +   e+l+t++gt eY+APE+l+ +  y+++vD+Ws+G+++ye+l+ k+pf+++   +++ ++++i +++ + +++ +    +e+k+li + l+kd++kRl      a++i++hp++
  MMETSP1325-20131115|4397_1 475 TLMKVVGKGAFGKVMMCRKKAGDDagqIYAVKVLIKSVIAAKKQVEHTKsERKILMEINHPFIVRLRYAFQSEDKLYLVTDYYNGGSLFYHLRKSRCFPENRARFYAAELMLAIEHLHQHGIIYRDLKLENILMDHQGHIALTDFGLSKENvvSVFAEQLKTFCGTAEYIAPELLK-GMRYGAAVDWWSFGILIYEMLNLKTPFYDK---NRKLMFHSIINQNPKMPKEFT----PEAKNLILQFLNKDAKKRLGcgedgADQIMSHPFF 736
                 67899**********999987655555**********9999998888878***************************************************************************************************9888999********************.******************************...999999999999999888877....9*******************99999********97 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.5   0.0   4.1e-44   9.4e-41       2     249 ..     475     719 ..     474     723 .. 0.88

  Alignments for each domain:
  == domain 1    score: 139.5 bits;  conditional E-value: 4.1e-44
                 EEEEEE-------EEEEEEETTTTSSEEEEEEEEE.CT.TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS CS
  PF07714.12   2 elgkklGeGafGkVvegtlkgekekkevkVavKtl.ke.saeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeR 249
                 +l+k +G+GafGkV+ ++ k   +++ +  avK+l k+  a++++ e+  +e ki+++++hp iv+l  ++ +e++l++vt+y +gG+L   Lrk+  + +  ++   +a+++  ++e+L+++ ++ rdL   N+L++++ ++ ++DfGL+++   +   ++ ++     +++apE+lk +++  + D WsfG+l++E+++l  +p+ + + + +++ + + ++ ++p++ ++e ++l+ q +++++++R
  MMETSP1325-20131115|4397_1 475 TLMKVVGKGAFGKVMMCRKK-AGDDAGQIYAVKVLiKSvIAAKKQVEHTKSERKILMEINHPFIVRLRYAFQSEDKLYLVTDYYNGGSLFYHLRKS--RCFPENRARFYAAELMLAIEHLHQHGIIYRDLKLENILMDHQGHIALTDFGLSKENVVSVFAEQLKTFCGTAEYIAPELLKGMRYGAAVDWWSFGILIYEMLNLK-TPFYDKNRKLMFHSIIN-QNPKMPKEFTPEAKNLILQFLNKDAKKR 719
                 57899**************9.66666666777777533367777789999*********************************************8..9999999999********************************************996666666666666899*******************************76.88888877777777644.345667889*****************99 PP

>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0     1e-16   2.3e-13       2      97 ..     199     289 ..     198     293 .. 0.94
   2 !   48.0   0.0   4.6e-16     1e-12       3     104 .]     300     392 ..     298     392 .. 0.96

  Alignments for each domain:
  == domain 1    score: 50.1 bits;  conditional E-value: 1e-16
                 SBEEEEEEEETSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTT...CEEEEEESSHHHHHHHHH CS
  PF00169.24   2 ikeGyllkksellktwkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdv...esyllsaeseeerkrWvq 97 
                 ++eG+l k+++ +k+wkkryfvL++++L+y+ ++ ++ +++++g+ipl + t++  +++         + f+++  d+   +s+ ++a+++ +r+ Wv+
  MMETSP1325-20131115|4397_1 199 QMEGWLEKQGHVNKSWKKRYFVLKTGRLEYYTDEPSNPNSSLQGVIPLAGSTLYSLQEP--------ACAFVVQSIDNgvkKSFPIKATNDASRECWVE 289
                 79********************************************************8........68888888888889****************96 PP

  == domain 2    score: 48.0 bits;  conditional E-value: 4.6e-16
                 BEEEEEEEETSSSCEEEEEEEEET.TEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTT..CEEEEEESSHHHHHHHHHHHHHHHH CS
  PF00169.24   3 keGyllkksellktwkkryfvLts.nyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdv..esyllsaeseeerkrWvqalknlls 104
                 + G+l+k+++  ++w+kr+fvL    +L+yf s+      + kg+i l+++t++   ++        +  f++++ d+  + + l+aes+ +r +Wv++ +n++s
  MMETSP1325-20131115|4397_1 300 MTGWLVKQGHIIPSWRKRWFVLEPpAKLHYFTSPA----GEWKGTIKLTGATITPSNAN--------PKLFQVHTLDGddKDFNLKAESSSDRDQWVRSCRNVTS 392
                 67**********************9*********5....9******************7........9********************************99986 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.6e-05     0.058     106     166 ..     563     620 ..     551     630 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.6e-05
   PF06293.9 106 aeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDld 166
                   +l+k + ++e++ r    ++  +i+ +h+ g+ ++dl   nil+d ++   +++l D+ 
  MMETSP1325-20131115|4397_1 563 FYHLRKSRCFPENRARFYAAELMLAIEHLHQHGIIYRDLKLENILMDHQG---HIALTDFG 620
                 5566665557777777777788889************************9...99999996 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     6e-05      0.14     158     194 ..     589     621 ..     561     623 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 6e-05
                 HHHHCSS--EEB-SS-SGGGEEEETTTTEEEE---TT CS
  PF01636.18 158 allpgaeppvllHgDlhpgNllvdpddgrvgviDfed 194
                 ++l    +++++ +Dl++ N+l+d ++g++++ Df++
  MMETSP1325-20131115|4397_1 589 EHL---HQHGIIYRDLKLENILMD-HQGHIALTDFGL 621
                 333...589***************.99999*****97 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0    0.0001      0.23      34      72 ..     106     146 ..     103     153 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.0001
                 TT.HHTTTTS.BSTTCEEEEETTEBGTTSHHHHHHHHHHTH CS
  PF00595.19  34 pg.gaaeagg.lkeGDkIlsvNgvdvenvshdeavqaikgk 72 
                  g g+ae +g + + D + +vNg+++++++  +a  ai++ 
  MMETSP1325-20131115|4397_1 106 NGaGPAESSGqIAPLDCLSAVNGKPLAGMAFKDAMTAIQEE 146
                 5889******************************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (903 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       580  (0.0424225); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.34u 0.35s 00:00:01.69 Elapsed: 00:00:00.85
# Mc/sec: 2545.78
//
Query:       MMETSP1325-20131115|4400_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-05   24.1   0.6       0.15   11.9   0.2    2.2  2  PF07719.12 Tetratricopeptide repeat
    2.9e-05   23.4   0.5    3.6e-05   23.2   0.3    1.1  1  PF13414.1  TPR repeat
    0.00035   20.0   0.2     0.0042   16.6   0.1    2.1  2  PF13181.1  Tetratricopeptide repeat
     0.0007   19.3   0.6     0.0028   17.4   0.4    1.8  1  PF13424.1  Tetratricopeptide repeat
     0.0051   17.3   0.2      0.009   16.5   0.1    1.4  1  PF13432.1  Tetratricopeptide repeat
     0.0066   16.4   0.1        5.4    7.3   0.0    2.2  2  PF13431.1  Tetratricopeptide repeat
     0.0079   15.6   0.4       0.89    9.1   0.0    2.2  2  PF00515.23 Tetratricopeptide repeat
     0.0094   15.7   0.4        2.7    7.9   0.1    2.2  2  PF13374.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.031   14.6   0.1        3.8    8.0   0.0    2.2  2  PF13174.1  Tetratricopeptide repeat
      0.043   13.8   0.1       0.11   12.5   0.1    1.5  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
       0.05   13.7   0.4      0.052   13.7   0.3    1.2  1  PF03704.12 Bacterial transcriptional activator domain


Domain annotation for each model (and alignments):
>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00028      0.34       2      24 ..      28      50 ..      27      60 .. 0.80
   2 !   11.9   0.2   0.00012      0.15       2      30 ..      62      90 ..      61      91 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00028
                HHHHHHHHHHHHTT-HHHHHHHH CS
  PF07719.12  2 ealynlGlayyklgdyeeAleaf 24
                +a +n+Gl ++kl +ye+A   f
  MMETSP1325-20131115|4400_1 28 DAQHNWGLTLLKLERYEDAGLIF 50
                5789**************96555 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00012
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAlel 30
                e + +lGl+ +kl + e Al++ ++++++
  MMETSP1325-20131115|4400_1 62 ESWAALGLCMAKLEQEEAALACQRQVVKI 90
                6799********************99986 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.3   2.9e-08   3.6e-05       4      67 ..      28      90 ..      25      92 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 2.9e-08
   PF13414.1  4 ealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                +a  + G  l+k+ +y++A   +e  +  +pn  e +++l+l+  kl  + e+Al++ ++++++
  MMETSP1325-20131115|4400_1 28 DAQHNWGLTLLKLERYEDAGLIFESIINDEPNAEESWAALGLCMAKLE-QEEAALACQRQVVKI 90
                57899******************************************8.558888888887776 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.25   3.1e+02       8      22 ..      34      48 ..      28      55 .. 0.78
   2 !   16.6   0.1   3.4e-06    0.0042       2      31 ..      62      91 ..      60      94 .. 0.93

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.25
                --HHHHTT-HHHHHH CS
   PF13181.1  8 GdiYrqlGdydkAke 22
                G+++++l +y+ A  
  MMETSP1325-20131115|4400_1 34 GLTLLKLERYEDAGL 48
                889999****99855 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 3.4e-06
                --TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelk 31
                +++ +lG+++++l + ++A+++ ++++++ 
  MMETSP1325-20131115|4400_1 62 ESWAALGLCMAKLEQEEAALACQRQVVKIR 91
                5799***********************985 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.4   2.2e-06    0.0028       6      76 ..      28      91 ..      23      93 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 2.2e-06
   PF13424.1  6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                ++ +n++l+l++l++y++A         ++++  +d p+   ++  l+ + ++l++ ++Al++ +++++i+
  MMETSP1325-20131115|4400_1 28 DAQHNWGLTLLKLERYEDAGL-------IFESIINDEPNAEESWAALGLCMAKLEQEEAALACQRQVVKIR 91
                6789***************93.......46666688899889**************************997 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   7.3e-06     0.009       4      52 ..      34      82 ..      31      91 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 7.3e-06
   PF13432.1  4 ArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaa 52
                ++ ll++ +y++A  ++e ++ ++P a e + +l+ + ++l + ++A+a
  MMETSP1325-20131115|4400_1 34 GLTLLKLERYEDAGLIFESIINDEPNAEESWAALGLCMAKLEQEEAALA 82
                7899*************************************88888875 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0048       5.9      13      32 ..      27      46 ..      15      46 .. 0.91
   2 !    7.3   0.0    0.0044       5.4       5      33 ..      53      81 ..      49      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0048
   PF13431.1 13 adaynnLAelllnnGdleeA 32
                +da +n +++ll++ ++e+A
  MMETSP1325-20131115|4400_1 27 TDAQHNWGLTLLKLERYEDA 46
                6899**************98 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0044
   PF13431.1  5 aleldPnnadaynnLAelllnnGdleeAe 33
                 ++ +Pn  +++ +L+++ +++ + e A+
  MMETSP1325-20131115|4400_1 53 IINDEPNAEESWAALGLCMAKLEQEEAAL 81
                577789999*************9999987 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00072      0.89       2      20 ..      28      46 ..      27      47 .. 0.92
   2 ?    4.9   0.1     0.015        18       2      23 ..      62      83 ..      61      91 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00072
                HHHHHHHHHHHHTT-HHHH CS
  PF00515.23  2 kalynlGnaylklgkydeA 20
                +a  n G+++lkl++y++A
  MMETSP1325-20131115|4400_1 28 DAQHNWGLTLLKLERYEDA 46
                577899***********99 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.015
                HHHHHHHHHHHHTT-HHHHHHH CS
  PF00515.23  2 kalynlGnaylklgkydeAley 23
                +++  lG++  kl++ + Al++
  MMETSP1325-20131115|4400_1 62 ESWAALGLCMAKLEQEEAALAC 83
                57999***************99 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0077       9.6       3      27 ..      28      52 ..      27      55 .. 0.88
   2 !    7.9   0.1    0.0022       2.7       7      32 ..      66      91 ..      62      93 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0077
   PF13374.1  3 aalnnLAlalrargryeeAlaleee 27
                +a++n +l+l ++ rye+A  ++e 
  MMETSP1325-20131115|4400_1 28 DAQHNWGLTLLKLERYEDAGLIFES 52
                689999*************888876 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0022
   PF13374.1  7 nLAlalrargryeeAlaleeealair 32
                 L+l  +++ + e+Ala +++++ ir
  MMETSP1325-20131115|4400_1 66 ALGLCMAKLEQEEAALACQRQVVKIR 91
                699999999999***********998 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0     0.003       3.8       1      32 [.      28      59 ..      28      60 .. 0.93
   2 ?    4.7   0.1     0.036        45       6      22 ..      67      83 ..      62      90 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.003
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  1 dAlyklalsyyklgdtdeAlealerlikeyPd 32
                dA+ + +l ++kl ++++A  ++e +i++ P+
  MMETSP1325-20131115|4400_1 28 DAQHNWGLTLLKLERYEDAGLIFESIINDEPN 59
                799999******88***************998 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.036
                HHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAlea 22
                l+l++ kl + ++Al+ 
  MMETSP1325-20131115|4400_1 67 LGLCMAKLEQEEAALAC 83
                89*****8688888775 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   8.5e-05      0.11      17      80 ..      17      83 ..      12      87 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 8.5e-05
                CC-ST-H..HHHCHHHHHHHHHH---HHHHHHHHHCTSHCHCBHHHHHHH.HHHHHHTT-HHHHCCC CS
   PF12895.2 17 aespkdp..edaylyalAlclylngeykrAyellrkleldssslgcryll.ArcllklgkydeAiav 80
                + +p+++  e+++ ++ +l+l+++++y+ A  +++   +d+ +++ ++ + + c  kl++ + A+a+
  MMETSP1325-20131115|4400_1 17 THTPQRQrkETDAQHNWGLTLLKLERYEDAGLIFESIINDEPNAEESWAAlGLCMAKLEQEEAALAC 83
                5555533346666666688888888888887777665556666677776667888888877777765 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   4.2e-05     0.052      70     124 ..      35      89 ..       7     100 .] 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.2e-05
  PF03704.12  70 eadlrlgrheellaelealvalhPlrErlhrqlmrAlyrsGrqaeALevYrrlrr 124
                    l+l+r+e++    e++++ +P  E+ +++l ++ +++++ ++AL++ r++ +
  MMETSP1325-20131115|4400_1  35 LTLLKLERYEDAGLIFESIINDEPNAEESWAALGLCMAKLEQEEAALACQRQVVK 89 
                 467899999999999*********************************9888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|4396_1  [L=1171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.9e-131  438.0   0.0   2.5e-131  437.6   0.0    1.2  1  PF00022.14 Actin
    1.5e-09   38.0  10.1    1.5e-09   38.0   7.0    2.4  2  PF13519.1  von Willebrand factor type A domain
    3.5e-05   23.4   0.6    6.6e-05   22.5   0.4    1.5  1  PF00397.21 WW domain
    6.4e-05   22.3   0.0    0.00014   21.1   0.0    1.5  1  PF04811.10 Sec23/Sec24 trunk domain
     0.0014   18.9   0.0     0.0042   17.4   0.0    1.8  1  PF08033.7  Sec23/Sec24 beta-sandwich domain
     0.0039   16.8   0.0        3.5    7.2   0.0    3.0  2  PF00092.23 von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> PF00022.14  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  437.6   0.0  1.1e-134  2.5e-131       2     391 ..      81     449 ..      80     451 .. 0.98

  Alignments for each domain:
  == domain 1    score: 437.6 bits;  conditional E-value: 1.1e-134
  PF00022.14   2 devsavVlDnGssttkaGfagedaPkavipsvvgkprgekvea.....klyvgdealekrpelevrnpvedGvvedwdameelwehvlkeelkvdpeehpllltepplnppanrekateivfEkfkvpalylaksavlsayasgkatglvvDsGasvtsvvpvleGlvLkkairrldlgGkalteqlkellsskkvevtprylikkkkavetesfktleeeevleeiKesvcevsddpegekaeasseepessYeLPDgseiilgeerfrvpEilFdpsligsesaleekkllgiaelivaainacdvdlrkeLlanivvtGGtsllpglteRlekelaqlapsgvkvkiiapeaerkysaWiGGSiLAslgtfqqlwvskqeYeEkGssvverk 391
                 ++v+++V+ +Gs++++aGfag+daP++v  +v+g+p++ +v++     + yvgdea++kr+ l++++p+e+G+v++wd+me++w+h++++el+v+peehp+l+t p +np++n+e++ +i+ E+f+vpa + ++ +vl++yasg++tg+v+D+Ga++ +++pv+eG+ L++a+    +gG+++t++l+++ +++                 ++sf+t++e+ +++++Ke++c+v+ d+++ + ++++ee++++YeLPDg++i +g+erfr+pEilF+pslig+e +       gia++ + ai++cdvd+rk+L+an++++GG+s +pgl+eRl  el++laps++kvk++ap+ erkys+WiGGSiL+sl++f+ +w++k++Y+E G+++v++ 
  MMETSP1325-20131115|4396_1  81 EDVQPIVIHFGSEFVQAGFAGDDAPRSVNKAVIGRPKHPGVMVgmdqkDGYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLFTCPLTNPKSNKERMFQILYETFNVPAAFPCTPQVLALYASGRTTGVVLDIGATNVTATPVYEGYELPHAYSFNGFGGRDVTDYLMKITTER-----------------GYSFTTTAERDIVRDVKEKTCYVALDFDA-EMAKPHEELARNYELPDGNVIAVGNERFRAPEILFTPSLIGKEAQ-------GIADMAFMAIMKCDVDIRKDLYANVIICGGSSCFPGLAERLTYELTALAPSTMKVKVVAPP-ERKYSSWIGGSILGSLSSFNPMWMTKEQYDEAGPAIVHKA 449
                 5799************************************9999999999***********************************************************************************************************************************************6.................9***************************5.999999************************************977.......*************************************************************.**************************************96 PP

>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   7.0   6.8e-13   1.5e-09       2     155 ..     617     881 ..     616     896 .. 0.72
   2 ?   -2.3   0.0       1.7   3.8e+03      54      78 ..    1034    1058 ..    1018    1136 .. 0.66

  Alignments for each domain:
  == domain 1    score: 38.0 bits;  conditional E-value: 6.8e-13
   PF13519.1   2 lvlvlDvSgSMnaedv.......................................sptrldaakaalkdlldel....pgdrvglvafsgsaelva....................................pltsdraalkaalnsldprl...........................mpgggtnlaaalalalellakad..grraaivlvtDGedn...........ssdieaas................alkragikiyvvgvgsdegaeallkelaeatggry 155
                 +v+v+D+SgSM  +                                           +rl+ ++aa+   l+el    +g++v lv+f+g++ l++                                                                                     +g t+l+ al +a++l+++++  +++a ivl tDG  n                  s                ++++ag+++ vv++ +     +++ ++a+atgg +
  MMETSP1325-20131115|4396_1 617 VVFVVDISGSMGVTTEvagkhvlegdrsaslttlrgagdaamhqqrlpgekanvtYISRLQSVQAAILLQLKELglsaNGANVDLVTFNGEVTLISgdgsepvvlagdrlqnpaelrqsvaafadataaagqG------------------QheaegrgaaaaasqdrlaglaervkglEETGPTALGPALVAAIDLANRRSsgKGGARIVLCTDGLSNvglgsiedyasM------SeaqqeevdgfytslgaTAREAGVTVSVVSIEGAACRLENIGAVADATGGSV 881
                 8**********9884468999999999*****************99999999887799*********88888755554788*********9877765555555455555555444444444444444444440..................144444444444444444444444444478899**************988766888*********777666443222220......123345555777777768999**********99988889**********985 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.7
   PF13519.1   54 apltsdraalkaalnsldprlmpgg 78  
                  +p+t+dra+ ++ +ns  p l++ +
  MMETSP1325-20131115|4396_1 1034 QPVTTDRAIAEECINSDVPALAAIQ 1058
                  5888888888888888777664333 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.4   2.9e-08   6.6e-05       2      31 .]       4      33 ..       3      33 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.9e-08
                --SEEE.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21  2 ppgWeersddd.dGrvYYyNheTgetqWekP 31
                +pgW+ ++ d+ ++  YY+++++ge +W+kP
  MMETSP1325-20131115|4396_1  4 APGWKPKY-DTvTQAMYYVHTKSGEISWTKP 33
                79***778.5777*****************9 PP

>> PF04811.10  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   6.2e-08   0.00014     116     223 ..     783     884 ..     773     902 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 6.2e-08
                 -----HHHHHHHHHT..T...S-EEEEEEE-S------.--S-SSTTS-CCCHHTT.-TTHHCHCHHHHHHHHHHCCCT-EEEEEEE-SC---CTTCHHHHHCC---EEEE CS
  PF04811.10 116 ralgpalkaavellkave...tggkiivfagslptvgaggklksredeslldidkekaklvkkadkfYkkLakecvkqgisvDlFlfsldyvdlaelkqlaeltgGqvvly 223
                 +algpal aa +l +  +    g++i++ + +l++vg+ g +++    s+++ ++e      + d fY++L+  + + g++v +  +  +   l +++ +a+ tgG+v + 
  MMETSP1325-20131115|4396_1 783 TALGPALVAAIDLANRRSsgkGGARIVLCTDGLSNVGL-GSIEDYA--SMSEAQQE------EVDGFYTSLGATAREAGVTVSVVSIEGAACRLENIGAVADATGGSVDIV 884
                 799**********99777787889**************.6665544..55554455......6788****************************************99765 PP

>> PF08033.7  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.8e-06    0.0042      44      96 .]     963    1037 ..     941    1037 .. 0.79

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.8e-06
                  ESCE-TT--EEEEEEE......................SS-TTS-SEEEEEEEEEEE-----EEEEEEEEEEEEE CS
   PF08033.7   44 lcsldpdstlavyfdi......................deklqsgkqayiQfatlYthssgerrlRVttvslpva 96  
                  l++++++s +a+ f                           l+sg+++ +Q++++Y++ sge++lRV + s pv+
  MMETSP1325-20131115|4396_1  963 LGNITSESDVAFSFRGdfpssaipntgsglgaelsdvkVPALTSGETLPVQVQIRYKDVSGEEHLRVLNASQPVT 1037
                  6667777777777766667777777777777777766533588999************************99985 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0044        10       2      13 ..     617     628 ..     616     651 .. 0.91
   2 !    7.2   0.0    0.0015       3.5      18     118 ..     677     819 ..     668     871 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0044
                 EEEEEE-STTS- CS
  PF00092.23   2 ivfvlDgSgSig 13 
                 +vfv+D+SgS+g
  MMETSP1325-20131115|4396_1 617 VVFVVDISGSMG 628
                 8**********9 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHHHHH.CCTTTEEEEEEEESSSEE..................EEE-TCCHHCCSSCGGHH....................................-CCGGSTTS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE-----C-- CS
  PF00092.23  18 ekvkefikkliekldigpdsvrvglvqyssdak..................tevslndfkskeellsav....................................sknlkylgggtntgkALkyalenlfssaagsrenapkvvillTDGksndg 118
                 ++v+ +i   ++ l  + ++ +v lv+++++++                              el++ v                                    + +    +g t++g AL +a++  +++   s  +    ++l TDG sn g
  MMETSP1325-20131115|4396_1 677 QSVQAAILLQLKELGLSANGANVDLVTFNGEVTlisgdgsepvvlagdrlqN---------PAELRQSVaafadataaagqgqheaegrgaaaaasqdrlaglaeRVKGLEETGPTALGPALVAAIDLANRR---SSGKGGARIVLCTDGLSNVG 819
                 5566666666666778888888888888888888888888774444444442.........333333334444444445666666777777777777788888887788888999*************9988...66666666999****99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       473  (0.0345963); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.62u 0.40s 00:00:02.02 Elapsed: 00:00:00.90
# Mc/sec: 3117.93
//
Query:       MMETSP1325-20131115|4402_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 586.86
//
Query:       MMETSP1325-20131115|4401_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-06   27.0   0.0      6e-06   26.3   0.0    1.3  1  PF13692.1 Glycosyl transferases group 1
    0.00045   19.8   4.0     0.0006   19.4   2.7    1.3  1  PF04360.7 Serglycin


Domain annotation for each model (and alignments):
>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   8.8e-10     6e-06      36     104 ..      93     162 ..      70     182 .. 0.81

  Alignments for each domain:
  == domain 1    score: 26.3 bits;  conditional E-value: 8.8e-10
   PF13692.1  36 elviiGkgpdelarllepnveflgfv..eelaellasadvglaplrfgeglplKlleylaaGlPvvasdi.g 104
                 + +++ + p++ +rll +++++l+++  +++ +ll++a+v+l p+   +++ + ++ ++a+G+Pvv+ +  +
  MMETSP1325-20131115|4401_1  93 RARVARRLPTRTRRLLMRRLIWLPPLppPQYMSLLKHASVVLDPYP--VTSTVTTINAFAVGTPVVTQPSaQ 162
                 45555566666666667799******766****************6..67899**************98733 PP

>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   2.7   8.8e-08    0.0006      87     109 ..     186     208 ..     132     211 .] 0.72

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 8.8e-08
   PF04360.7  87 lsedysgsgsgsGsGsGsgsGsG 109
                 +s   sgsg gsGsGsGsgsG G
  MMETSP1325-20131115|4401_1 186 ISSGGSGSGDGSGSGSGSGSGGG 208
                 33333555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 991.43
//
Query:       MMETSP1325-20131115|4404_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-39  134.2   0.0    4.4e-39  134.0   0.0    1.0  1  PF00069.20 Protein kinase domain
    9.8e-18   64.0   0.0      1e-17   63.9   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
    3.7e-05   23.4   0.0      0.022   14.3   0.0    2.1  2  PF01636.18 Phosphotransferase enzyme family
    0.00012   21.1   0.0    0.00016   20.6   0.0    1.1  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.024   13.7   0.0      0.049   12.7   0.0    1.5  2  PF06176.6  Lipopolysaccharide core biosynthesis protein (WaaY)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.0   0.0   1.6e-42   4.4e-39      63     193 ..       2     146 ..       1     148 [] 0.91

  Alignments for each domain:
  == domain 1    score: 134.0 bits;  conditional E-value: 1.6e-42
                 EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEE..TT--E...EE------EEE.CEESS-CSS----GGGS-HHH..HH......TSHHHHHHHHHHHHHHHHHHHH CS
  PF00069.20  63 llevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLld..kkgel...kiaDFGlakkl.eksseklttlvgtreYmAPEv..ll......kakeytkkvDvWslGvilyell 193
                 l+ev++e+d ++lv+ey+eg++lfd++ ++g+++e+++k+++ qi+ +l++lHs++i+HrD+KpeNi l   ++ge    k+ DFGl+k++  + +++++t+vgt+ Y+APE+  l+      ++  y+ +vD WslG++l  +l
  MMETSP1325-20131115|4404_1   2 LHEVYQENDVFLLVMEYCEGTELFDAIIRRGRFTEDDAKDVLAQIADALAHLHSHNIAHRDVKPENIQLVpaSDGEPavvKLLDFGLSKVIdPEVGSEARTMVGTPCYIAPEIetLKerrardRNATYGIEVDCWSLGCVLLVML 146
                 6899***************************************************************8884455555888*********99989999***************96533778888999***************9998 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.0   3.8e-21     1e-17      69     198 ..       5     145 ..       1     148 [] 0.83

  Alignments for each domain:
  == domain 1    score: 63.9 bits;  conditional E-value: 3.8e-21
                 EBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET.....TTEEEE-----CEESTTTSCE.EESTT-EECGGGS-HHHHHHSE.........EEHHHHHHH---HHHHH CS
  PF07714.12  69 vctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee.....ekvvkisDfGLardiekddyy.kkkeeaklpvkWmapEslkekk.........ftsksDvWsfGvllwEi 198
                 v+ +++ +l+v+ey++g +L + + ++   ++t +d  ++ +qia+++++L+s+++ Hrd+   N+ l         vvk+ DfGL++ i  d +  ++ ++      ++apE+ + k+         + ++ D Ws G++l  +
  MMETSP1325-20131115|4404_1   5 VYQENDVFLLVMEYCEGTELFDAIIRR--GRFTEDDAKDVLAQIADALAHLHSHNIAHRDVKPENIQLVPasdgePAVVKLLDFGLSKVI--DPEVgSEARTMVGTPCYIAPEIETLKErrardrnatYGIEVDCWSLGCVLLVM 145
                 556677799**************9998..9************************************66533555477*************..44442555566677899***8644444569******************99755 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   8.1e-06     0.022      71     108 ..      13      56 ..       3      59 .. 0.91
   2 !    8.0   0.0    0.0007       1.9     168     201 ..      58      95 ..      55      96 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 8.1e-06
                 EEEEE---HHBCCT......CSHHHHHHHHHHHHHHHHHHHHHS CS
  PF01636.18  71 falleyvpgevler......klnarqlpallealaellaalhqa 108
                   ++ey++g+ l +      + ++++++++l+++a++la lh++
  MMETSP1325-20131115|4404_1  13 LLVMEYCEGTELFDaiirrgRFTEDDAKDVLAQIADALAHLHSH 56 
                 679*****************99********************97 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0007
                 EB-SS-SGGGEEEE...TTTTEE.EE---TT-BBE-TC CS
  PF01636.18 168 llHgDlhpgNllvd...pddgrv.gviDfedaglgppl 201
                 + H+D +p N+ +    ++++ v  ++Df+++ + +p+
  MMETSP1325-20131115|4404_1  58 IAHRDVKPENIQLVpasDGEPAVvKLLDFGLSKVIDPE 95 
                 77*********99889988888899*********9997 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   5.9e-08   0.00016      93     166 ..      13      87 ..      10     100 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 5.9e-08
   PF06293.9  93 dllteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeee..ekakvwliDld 166
                 +l++e  eg++  ++i+++   + e   + +l +++ + a +h+ +++H+d  + ni l      e a v l+D+ 
  MMETSP1325-20131115|4404_1  13 LLVMEYCEGTELFDAIIRR-GRFTEDDAKDVLAQIADALAHLHSHNIAHRDVKPENIQLVPASdgEPAVVKLLDFG 87 
                 5899999999999999997.6688899999***************************9887775566777888885 PP

>> PF06176.6  Lipopolysaccharide core biosynthesis protein (WaaY)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.8e-05     0.049     115     163 ..       9      65 ..       3      84 .. 0.75
   2 ?   -2.7   0.0       0.9   2.5e+03     185     214 ..     118     144 ..     115     145 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.8e-05
   PF06176.6 115 vkvyimlieyieGvelndlpe.....i...sedlkdkikesikelhehgmvsGdphk 163
                  +v+++++ey eG el d  +          +d+ ++i +++ +lh h++   d + 
  MMETSP1325-20131115|4404_1   9 NDVFLLVMEYCEGTELFDAIIrrgrfTeddAKDVLAQIADALAHLHSHNIAHRDVKP 65 
                 5789*************97642222221113467789999*********98877655 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.9
   PF06176.6 185 aerkakdridlerhygiknevkdlGyylli 214
                 +er+a+dr      ygi+ +   lG  ll+
  MMETSP1325-20131115|4404_1 118 KERRARDRN---ATYGIEVDCWSLGCVLLV 144
                 578888884...468888777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 695.41
//
Query:       MMETSP1325-20131115|4405_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00046   19.8   0.0     0.0005   19.7   0.0    1.0  1  PF09038.5 Tumour suppressor p53-binding protein-1 Tudor
     0.0029   17.6   0.0     0.0032   17.4   0.0    1.2  1  PF05641.7 Agenet domain


Domain annotation for each model (and alignments):
>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   7.2e-08    0.0005       5      41 ..       1      37 [.       1      50 [. 0.90

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 7.2e-08
                -----EEE-ST---BB---EEEE-----EEEE----- CS
   PF09038.5  5 vglrvvakwssngyfysgkitkdagegkykllfddgy 41
                vg rv a+++    +y g+it   g+g + + +ddg 
  MMETSP1325-20131115|4405_1  1 VGARVEAQFAKASAWYPGRITTVHGDGSFDIAYDDGD 37
                799********************************95 PP

>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   4.7e-07    0.0032      17      48 ..      12      43 ..       1      55 [. 0.77

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 4.7e-07
   PF05641.7 17 rgaWfrAkVlkelkeskykveyddlsledges 48
                  aW+++ +++++++  + + ydd ++e+  +
  MMETSP1325-20131115|4405_1 12 ASAWYPGRITTVHGDGSFDIAYDDGDSETKVD 43
                78********************9988776544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|4403_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0042   15.1  11.0      0.005   14.8   7.6    1.0  1  PF10174.4  RIM-binding protein of the cytomatrix active zone
  ------ inclusion threshold ------
      0.089   12.7   8.8       0.12   12.3   6.1    1.1  1  PF05103.8  DivIVA protein
       0.09   12.5   0.7       0.18   11.5   0.2    1.7  1  PF01084.15 Ribosomal protein S18
       0.16   11.5   3.0       0.51   10.0   0.1    2.0  2  PF02787.14 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
       0.27   11.3   6.1        1.4    8.9   4.3    1.9  1  PF05837.7  Centromere protein H (CENP-H)
       0.37    9.0   1.7       0.41    8.8   1.2    1.1  1  PF04906.8  Tweety
       0.94    9.5   7.7        2.7    8.0   2.7    2.3  2  PF13747.1  Domain of unknown function (DUF4164)
        5.7    5.7  10.6        3.5    6.4   6.4    1.3  1  PF07767.6  Nop53 (60S ribosomal biogenesis)
        6.8    6.5   9.2       0.67    9.7   3.2    1.8  2  PF10779.4  Haemolysin XhlA
        9.4    6.1  11.0         95    2.8   7.6    2.1  1  PF12757.2  Protein of unknown function (DUF3812)


Domain annotation for each model (and alignments):
>> PF10174.4  RIM-binding protein of the cytomatrix active zone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   7.6   3.6e-06     0.005     657     748 ..       6      94 ..       2     101 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.6e-06
   PF10174.4 657 aasnhlEkqveklesdlkqlkaEleqlklqleksqeslmekqqeLqaleaElrkqlEevlklkqeallaaisekdaniallelqaskkkitq 748
                  a+ + Ek + kle++lkq ++E+e ++  ++++q + m kqq+L    +E  +++    +l   a l+a+s +d ++al e+     +  q
  MMETSP1325-20131115|4403_1   6 EANRNTEKALAKLEKQLKQKNEEIEYMQ-AIKRNQTESMIKQQQLMFSMVETARKMGASPELI--AELQAQSSPDFGAALDEMDEEVERTRQ 94 
                 578899**********************.8*******************************96..77999***********97665444444 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   6.1   8.7e-05      0.12      37     121 ..      11      97 ..       2     101 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.7e-05
   PF05103.8  37 llkeneelkeeieeleekleeykeleeslkkslvvaqetaeevkanakkeaeliikeaekkaekive..eaeeeakkleteldelkr 121
                   k  ++l++++++++e++e+++ ++++  +s++ +q+    + ++a+k        ae +a++  +   a +e+ +  +++ + kr
  MMETSP1325-20131115|4403_1  11 TEKALAKLEKQLKQKNEEIEYMQAIKRNQTESMIKQQQLMFSMVETARKMGASPELIAELQAQSSPDfgAALDEMDEEVERTRQAKR 97 
                 5677899****************************************9987777666666666653222555555554444444444 PP

>> PF01084.15  Ribosomal protein S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   0.00013      0.18      26      52 ..      35      61 ..      29      61 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00013
                -TTTT----HHHHHHHHHHHHHHHH-- CS
  PF01084.15 26 lprriTglcakqQrklakaIKrARila 52
                + r +T    kqQ ++   + +AR+++
  MMETSP1325-20131115|4403_1 35 IKRNQTESMIKQQQLMFSMVETARKMG 61
                7899*********************98 PP

>> PF02787.14  Carbamoyl-phosphate synthetase large chain, oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.5     0.058        79      44      68 ..      13      37 ..      10      40 .. 0.87
   2 ?   10.0   0.1   0.00037      0.51      48      89 ..      39      91 ..      31      98 .. 0.73

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.058
  PF02787.14 44 keiveleeelkkeelleellreaKk 68
                k++++le++lk+++++ e ++ +K+
  MMETSP1325-20131115|4403_1 13 KALAKLEKQLKQKNEEIEYMQAIKR 37
                67999*******9999999999997 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00037
  PF02787.14 48 eleeelkkeelleellreaKklGfsDaqiakl...........lgvteeevrk 89
                ++e ++k+++l+ ++++ a+k+G s + ia+l           l+  +eev +
  MMETSP1325-20131115|4403_1 39 QTESMIKQQQLMFSMVETARKMGASPELIAELqaqsspdfgaaLDEMDEEVER 91
                6889999999********************99544444444443445555555 PP

>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.3     0.001       1.4       4      74 ..      17      96 ..       3     106 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.001
   PF05837.7  4 eilnlqqasretreeLsdvekerlqlkqknrelvrellelkkkkesdre.........deelkeklekleaelkkskkkw 74
                +++++ ++ +e  e ++ +++++ +   k+++l+ ++ e+++k  +  e         +++  ++l+++++e++++++  
  MMETSP1325-20131115|4403_1 17 KLEKQLKQKNEEIEYMQAIKRNQTESMIKQQQLMFSMVETARKMGASPEliaelqaqsSPDFGAALDEMDEEVERTRQAK 96
                34555556666666678899999999999************999999999999*999999*************9999854 PP

>> PF04906.8  Tweety
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   1.2    0.0003      0.41     119     165 ..       7      54 ..       1      76 [. 0.67

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0003
   PF04906.8 119 leekleqeLtkleeifakrtdlletlrllqeq.veeivqqlseipfwk 165
                  +++ e+ L+kle++++++++ +e +++++++ +e++++q + +  + 
  MMETSP1325-20131115|4403_1   7 ANRNTEKALAKLEKQLKQKNEEIEYMQAIKRNqTESMIKQQQLMFSMV 54 
                 567788999999999999999888888877651455555555444332 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.7     0.002       2.7       6      39 ..       4      37 ..       1      73 [. 0.83
   2 ?    3.6   0.1     0.049        66      14      33 ..      79      98 ..      68     106 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.002
   PF13747.1  6 leaalkrLeaaldsLesaverrleaerkrdelea 39
                l++a ++ e+al +Le+++++++e+ +  +++++
  MMETSP1325-20131115|4403_1  4 LKEANRNTEKALAKLEKQLKQKNEEIEYMQAIKR 37
                78999999***************99887765554 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.049
   PF13747.1 14 eaaldsLesaverrleaerk 33
                 aald++++ ver ++a+r 
  MMETSP1325-20131115|4403_1 79 GAALDEMDEEVERTRQAKRG 98
                689*********99999875 PP

>> PF07767.6  Nop53 (60S ribosomal biogenesis)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   6.4    0.0025       3.5     285     339 ..       5      59 ..       3      77 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0025
   PF07767.6 285 kekrrkelekeakeekelkkkeeqlarlkeikkevaekekeraekkeerkekaek 339
                 ke+ r  ++++ak ek+lk+k+e+++ +++ik+++ e   ++++   ++ e a+k
  MMETSP1325-20131115|4403_1   5 KEANRNTEKALAKLEKQLKQKNEEIEYMQAIKRNQTESMIKQQQLMFSMVETARK 59 
                 78999999*************************9999887777665555555555 PP

>> PF10779.4  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.2   0.00049      0.67      19      48 ..       5      34 ..       1      40 [. 0.89
   2 ?   -2.7   0.1       3.7     5e+03       3      12 ..      84      93 ..      82      97 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00049
   PF10779.4 19 ekaenalEkadaalekqiknlnkdLskIkk 48
                ++a+++ Eka a+lekq k+ n++++ +++
  MMETSP1325-20131115|4403_1  5 KEANRNTEKALAKLEKQLKQKNEEIEYMQA 34
                799**********************98875 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 3.7
   PF10779.4  3 dikerlnrie 12
                +++e+++r+ 
  MMETSP1325-20131115|4403_1 84 EMDEEVERTR 93
                5666666654 PP

>> PF12757.2  Protein of unknown function (DUF3812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   7.6     0.069        95       4     100 ..       2      96 ..       1     100 [. 0.63

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.069
   PF12757.2   4 allaaAqrnvkasLqdidkkiyaetgrvslktqkeweekaleraqkn..sekrsenagkvdlG...gglfvdqaevdaiArsrvqPvLdeIderaeaqRard 100
                  +l++A+rn ++ L++++k+  ++       + +  + +a++r q +   ++++   ++v+     g      ae++a  +     +Lde+de++e++R+++
  MMETSP1325-20131115|4403_1   2 RVLKEANRNTEKALAKLEKQLKQK-------NEEIEYMQAIKRNQTEsmIKQQQLMFSMVETArkmGASPELIAELQAQSSPDFGAALDEMDEEVERTRQAK 96 
                 689****************99885.......33333444444444442222233333344333333333344567777777788889999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2123  (0.155281); expected 273.4 (0.02)
Passed bias filter:                     1297  (0.0948654); expected 273.4 (0.02)
Passed Vit filter:                       172  (0.0125805); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.60u 0.49s 00:00:01.08 Elapsed: 00:00:00.84
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|4406_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|4407_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|4408_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   13.9   0.0      0.024   13.5   0.0    1.3  1  PF01493.14 GXGXG motif


Domain annotation for each model (and alignments):
>> PF01493.14  GXGXG motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.8e-06     0.024     155     197 ..       1      52 [.       1      65 [. 0.83

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.8e-06
                 -B--------EEEE----...........-HHHHB-TTT-EEEES-S.----H CS
  PF01493.14 155 nvGagmsgGtiyvlgeie..........sgldkkvnleiveeerlealaeeek 197
                 n+Ga m+gG++y+l   e          + ++ ++n+ +v  +r+++   +++
  MMETSP1325-20131115|4408_1   1 NIGAAMTGGVAYFLEGAEmdardederlAAMQRRLNPGTVRAKRITS-TIGKQ 52 
                 89***********9988888999999999999999999999998887.34444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       694  (0.0507607); expected 273.4 (0.02)
Passed bias filter:                      460  (0.0336454); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.59
# Mc/sec: 515.83
//
Query:       MMETSP1325-20131115|4409_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-19   67.6   0.0    7.3e-19   67.5   0.0    1.0  1  PF01031.15 Dynamin central region
  ------ inclusion threshold ------
      0.083   12.5   0.2       0.12   12.0   0.1    1.2  1  PF05192.13 MutS domain III


Domain annotation for each model (and alignments):
>> PF01031.15  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.0   1.1e-22   7.3e-19      46     125 ..       7      87 ..       6      88 .] 0.96

  Alignments for each domain:
  == domain 1    score: 67.5 bits;  conditional E-value: 1.1e-22
                 TXTTGGGCGGGXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTXXXXXXXXXXXXXXX.-HHHHHHHHHHHHHHHHHHHH CS
  PF01031.15  46 nhpsyrtlaercgtpyLakkLnkeLvehIrksLPdlkeqinkklqetekeLekyGesvp.edeeeklalllelitkFsedf 125
                 +hp+yr++ +rc tp+La++Ln++L++hIr++LPd+k++i+ +  ++ +e+e++G  +   ++ + + +ll+l+++++++f
  MMETSP1325-20131115|4409_1   7 THPAYRNMLNRCTTPTLARMLNQILMHHIRDCLPDIKNRITGMTIDIAQEIEALGVPTDsMNPGHLGGILLSLLSNYAANF 87 
                 7******************************************************998867899999**********9998 PP

>> PF05192.13  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.7e-05      0.12      24      55 ..      13      45 ..       7      49 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.7e-05
                HHH---SS----HHHHHHHHS-B--.---HHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
  PF05192.13 24 glldrtvTpmGkRlLrqwllsPltd.iaeinaR 55
                + l+r+ Tp  +R+L q l++ ++d + +i+ R
  MMETSP1325-20131115|4409_1 13 NMLNRCTTPTLARMLNQILMHHIRDcLPDIKNR 45
                689******************999966666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|4410_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      382  (0.0279403); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.59
# Mc/sec: 341.18
//
Query:       MMETSP1325-20131115|4412_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.072   12.6   1.2      0.072   12.6   0.8    1.8  2  PF11471.3 Maltoporin periplasmic N-terminal extension


Domain annotation for each model (and alignments):
>> PF11471.3  Maltoporin periplasmic N-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   1.3       0.1   1.4e+03      15      26 ..      31      42 ..      25      48 .. 0.52
   2 ?   12.6   0.8   5.2e-06     0.072      12      37 ..      49      74 ..      43      77 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.1
   PF11471.3 15 illalsssAmaa 26
                + +a++++A aa
  MMETSP1325-20131115|4412_1 31 ATAAAAATAAAA 42
                333333344444 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 5.2e-06
   PF11471.3 12 slLillalsssAmaakLTvEQRLelL 37
                + L+ll++sss++a++ ++  RLe+L
  MMETSP1325-20131115|4412_1 49 LSLLLLTFSSSSSATSFSLQDRLEQL 74
                2334444479**************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.67
# Mc/sec: 300.44
//
Query:       MMETSP1325-20131115|4411_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-22   79.3   0.2    2.4e-22   79.1   0.1    1.0  1  PF00344.15 SecY translocase


Domain annotation for each model (and alignments):
>> PF00344.15  SecY translocase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.1   1.8e-26   2.4e-22     258     342 .]       1      81 [.       1      81 [. 0.99

  Alignments for each domain:
  == domain 1    score: 79.1 bits;  conditional E-value: 1.8e-26
                 HH.H-SS-HHHHHHHCCH----------.-HCCCCCCCCCHHHHH---HCHHHCCCHHHHHHHH-..GG-----TTT---HHHHHH CS
  PF00344.15 258 yt.aigfnpkeiAknlkksggfIpGirpgkstekylekvipritviGgiflallavlpdllgalgslsfggtslliaVgvaldtie 342
                 ++ ++g++p+++Ak+l++++++++G+r+  ++  +l+++ip+++++Gg+++++l+v++d+lga+g    +gt++l+aV+++++++e
  MMETSP1325-20131115|4411_1   1 WIeVSGSSPRDVAKQLRDQQMVMKGHRD-VAMITVLNRYIPTAAAFGGMCIGALTVMADFLGAIG----SGTGILLAVTIIYQYYE 81 
                 8999************************.************************************....***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|4413_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.3   10.5   2.5       0.38   10.2   1.7    1.2  1  PF00769.14 Ezrin/radixin/moesin family


Domain annotation for each model (and alignments):
>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.7   2.7e-05      0.38      74     143 ..      10      68 ..       4     101 .. 0.50

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 2.7e-05
  PF00769.14  74 ekekeeLekevdeaeaevakleeerekkeaeteqlqkelreareaeeeakeellevlaaptapsaavsep 143
                 ++e+  L + +   eae++ l+ + +++++ ++ +q  + +a +a            aa+ a+ aav+ p
  MMETSP1325-20131115|4413_1  10 AEEQLALLQNMSGSEAEAHALQAQAQAQAQAAAAAQVAATAAAAAV-----------AAQAAAAAAVPPP 68 
                 4455555555555555555555444444444433333333333322...........2221111222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1443  (0.105544); expected 273.4 (0.02)
Passed bias filter:                      526  (0.0384728); expected 273.4 (0.02)
Passed Vit filter:                        89  (0.00650965); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.39s 00:00:01.17 Elapsed: 00:00:00.77
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|4416_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 554.45
//
Query:       MMETSP1325-20131115|4417_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|4415_1  [L=325]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-24   85.4   0.0    2.1e-13   50.5   0.0    2.4  2  PF01416.15 tRNA pseudouridine synthase


Domain annotation for each model (and alignments):
>> PF01416.15  tRNA pseudouridine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0   5.1e-12     7e-08       2      77 ..      52     121 ..      51     168 .. 0.82
   2 !   50.5   0.0   1.5e-17   2.1e-13       1     105 []     210     323 ..     210     323 .. 0.87

  Alignments for each domain:
  == domain 1    score: 32.7 bits;  conditional E-value: 5.1e-12
                 HHHH---B------SS...--..----B---EEEEEEE-----EEE---------------TTT-------CCHHHHH...........H CS
  PF01416.15   2 aelydGthdFsgfqkq...ktvegsleralekigiekeeevvveikgnaFlrnqvrimvgalsrtdkgvhaleqveel...........L 77 
                  ++ydGt d sg+q+q   +t+++sle +l+ +                     v   +++++rtd+gvha++qv ++           L
  MMETSP1325-20131115|4415_1  52 VVSYDGT-DWSGWQTQshgRTIQDSLEARLSGLLR-------------------VQTTIAGAGRTDAGVHAKAQVFHFdlpttslsslgL 121
                 689****.********999************9987...................99*********************9888888655552 PP

  == domain 2    score: 50.5 bits;  conditional E-value: 1.5e-17
                 HHHHH---B------SS--...----B---EEEE.......EEE-----.EEE---------------TTT-------CCHHHHHHHH--GGG---....-------EEEEEE-- CS
  PF01416.15   1 aaelydGthdFsgfqkqktve.gsleralekigi.......ekeeevvv.eikgnaFlrnqvrimvgalsrtdkgvhaleqveelLnsklrpkape.rvlkapavgLklfdvryd 105
                 aa +++Gth+F +f   + +   ++++ l +++i       ++ ++ v+ + ++++Fl+++ r++ g+l+r++ g++++++v+ lL +k r   ++  + kapa+gL+  ++ yd
  MMETSP1325-20131115|4415_1 210 AAAHLIGTHNFASFGVLRDGDpRDPVKNLRRLEIqrissdpSEGGDRVIiTAEADRFLYHMMRMISGTLVRVGLGKMKASDVKTLLLAKGRT-GGPvSAHKAPAQGLCMEEAFYD 323
                 6889***********88555558888888888887777788777777778****************************************77.4457***********9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.80
# Mc/sec: 973.52
//
Query:       MMETSP1325-20131115|4419_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-21   73.7   0.0    9.8e-21   73.3   0.0    1.1  1  PF03129.15 Anticodon binding domain
  ------ inclusion threshold ------
      0.025   14.4   0.0      0.032   14.1   0.0    1.2  1  PF13659.1  Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF03129.15  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.3   0.0   1.4e-24   9.8e-21       1      90 [.      49     137 ..      49     141 .. 0.94

  Alignments for each domain:
  == domain 1    score: 73.3 bits;  conditional E-value: 1.4e-24
                 SEEEEESSSSHHHHHHHHHHHHHHHHC----EEE--SSS----HHHHHHH----EEEEE-HHHHCTTEEEEEETTTTBEEEEETTTHHHH CS
  PF03129.15   1 qvvviplgekaeeledyakklaeeLreagirvelddrsesigkklrradllgipfavvvGekelekgtvtvrdrdtgeqervsleelvek 90 
                 +++v +l+++ + + ++++++a+ L +ag++ + d +++sigk+++r+d++g+p+ v+v++++l+++tvt+r+rd+++q rv++++++  
  MMETSP1325-20131115|4419_1  49 KCAVFNLQSNGD-FLPVVRQVAASLTAAGLSNKTDTSGQSIGKRYARTDEVGTPYGVTVDFDTLKDNTVTLRERDSQSQLRVPIADIPPL 137
                 689999999655.9**************************************************99******************998765 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   4.7e-06     0.032       3      47 ..       7      59 ..       6     137 .. 0.54

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.7e-06
   PF13659.1  3 rvldpgcGsGtfllaalel...l...aalllgvEldpr.....aaalaarnlarag 47
                +v++p+ G+G +l+a+le+   +   +++++++  +++     +   a +nl+++g
  MMETSP1325-20131115|4419_1  7 SVIEPSFGMGRILYALLEHsfyVpedNKEAVVMRFNANvapvkC---AVFNLQSNG 59
                79***************995541344555555555555332220...223333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 756.50
//
Query:       MMETSP1325-20131115|4414_1  [L=497]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.043   13.7   0.3        0.2   11.5   0.2    2.2  1  PF04568.7  Mitochondrial ATPase inhibitor, IATP
        0.1   11.9   0.0       0.22   10.8   0.0    1.6  1  PF02149.14 Kinase associated domain 1


Domain annotation for each model (and alignments):
>> PF04568.7  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   2.9e-05       0.2      23      58 ..     317     352 ..     303     356 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.9e-05
   PF04568.7  23 svaarsssegetgsGagkggGgGsireaggaFgkrE 58 
                 +   r+s +   g Gag ggGgG++ +++g F++ +
  MMETSP1325-20131115|4414_1 317 APKKRRSIDAAAGVGAGAGGGGGAVGANSGMFERLQ 352
                 4455566666677799999999**********9976 PP

>> PF02149.14  Kinase associated domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   3.3e-05      0.22      17      46 ..     465     494 ..     462     495 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 3.3e-05
  PF02149.14  17 lglygvdfkRlsGpqwlykdlatkilkeLr 46 
                 + ly +d++R  G++  + ++++++++ L+
  MMETSP1325-20131115|4414_1 465 DKLYVLDMQRKQGGPVEFMRFCAQVMENLK 494
                 679************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       544  (0.0397894); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.37s 00:00:01.19 Elapsed: 00:00:00.67
# Mc/sec: 1777.60
//
Query:       MMETSP1325-20131115|4421_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.70
# Mc/sec: 280.72
//
Query:       MMETSP1325-20131115|4422_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.55
# Mc/sec: 936.76
//
Query:       MMETSP1325-20131115|4420_1  [L=463]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-15   54.5  23.7    6.2e-09   35.4   8.7    2.6  2  PF01485.16 IBR domain


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   2.3   1.5e-09   2.1e-05      19      64 .]       6      67 ..       2      67 .. 0.95
   2 !   35.4   8.7   4.5e-13   6.2e-09      15      58 ..      91     130 ..      72     138 .. 0.81

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 1.5e-09
  PF01485.16 19 kwCprpdCeaiiekekgakks.................svtCskCgfefCflCkkewHeglsC 64
                + Cp+p+C++++++++  +                   ++ C+ Cg+++C  C+ e H g+ C
  MMETSP1325-20131115|4420_1  6 RFCPNPKCGRALRLTSTTAAAgellsnmgrsqacglapMFFCE-CGTSVCGACGGEGHLGVVC 67
                58*****************99**********************.**************99888 PP

  == domain 2    score: 35.4 bits;  conditional E-value: 4.5e-13
  PF01485.16  15 ekelkwCprpdCeaiiekekgakkssvtCskCgfefCflCkkew 58 
                 +k+++ Cp+  C+++i+k++g+++  ++C++C++ fC++C+ + 
  MMETSP1325-20131115|4420_1  91 RKNTRGCPK--CNYPIQKNGGCNH--MRCQQCNYYFCWKCGGPG 130
                 466679*77..*************..**************9874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       658  (0.0481276); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.33s 00:00:01.14 Elapsed: 00:00:00.61
# Mc/sec: 1818.87
//
Query:       MMETSP1325-20131115|4424_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       87  (0.00636337); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|4418_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.079   10.8   0.2        0.1   10.5   0.1    1.0  1  PF01175.13 Urocanase


Domain annotation for each model (and alignments):
>> PF01175.13  Urocanase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   7.4e-06       0.1     261     306 ..      35      80 ..      30      85 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 7.4e-06
  PF01175.13 261 legYlPagltleeakelrekdpeelvkaakeslarhveailelqek 306
                 + gY+P glt +++k+l++k+ ++ +++ k++++   e++++ q++
  MMETSP1325-20131115|4418_1  35 MAGYVPDGLTPAQYKALKAKEAAAAKANKKKAMKGSAETLTTWQAR 80 
                 67**********************************9999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       789  (0.0577092); expected 273.4 (0.02)
Passed bias filter:                      565  (0.0413253); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 517.78
//
Query:       MMETSP1325-20131115|4425_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          3    7.6   5.9       0.53    9.9   0.4    2.2  3  PF13209.1 Protein of unknown function (DUF4017)


Domain annotation for each model (and alignments):
>> PF13209.1  Protein of unknown function (DUF4017)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0     0.076     1e+03      27      37 ..      68      78 ..      66      83 .. 0.81
   2 ?   -3.4   0.1      0.58   7.9e+03      48      48 ..     103     103 ..      95     112 .. 0.46
   3 ?    9.9   0.4   3.9e-05      0.53      16      55 ..     163     203 ..     158     208 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.076
   PF13209.1 27 yntvgWklfvG 37
                y t  W +fv 
  MMETSP1325-20131115|4425_1 68 YATTCWAFFVA 78
                88999****96 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 0.58
   PF13209.1  48 t 48 
                 t
  MMETSP1325-20131115|4425_1 103 T 103
                 2 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 3.9e-05
   PF13209.1  16 viaiiiPa.segyntvgWklfvGqayaiPiflitaiitfyi 55 
                 +i +ii a s+ yn + + + vG+      f+i     fyi
  MMETSP1325-20131115|4425_1 163 IIGMIIAAfSKDYNDLYFEFLVGKCQGYAYFFIFDAPRFYI 203
                 7877777669*************988888899988888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       586  (0.0428613); expected 273.4 (0.02)
Passed bias filter:                      406  (0.0296957); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1203.17
//
Query:       MMETSP1325-20131115|4428_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 589.87
//
Query:       MMETSP1325-20131115|4427_1  [L=495]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   15.0   0.1       0.63   10.1   0.1    2.5  2  PF07499.8  RuvA, C-terminal domain
      0.093   12.1   4.3        3.7    6.9   1.1    2.3  2  PF03066.10 Nucleoplasmin
          1    7.2   4.1        1.5    6.7   2.9    1.1  1  PF05053.8  Menin


Domain annotation for each model (and alignments):
>> PF07499.8  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00014      0.63      23      46 ..      18      43 ..      15      44 .. 0.68
   2 ?    2.3   0.0     0.036   1.7e+02       6      17 ..     437     448 ..     434     450 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00014
   PF07499.8 23 Avakvle..dpgasveelIRaALklL 46
                A a + +  + ++ v++++R+AL+l+
  MMETSP1325-20131115|4427_1 18 AKACIEAfqGLDLGVSQWVREALALI 43
                33444443366666*********997 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.036
   PF07499.8   6 aveALlaLGYke 17 
                 a ++L aLG+k+
  MMETSP1325-20131115|4427_1 437 ASDGLKALGFKA 448
                 6789******96 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   1.1   0.00082       3.7     118     140 ..     168     190 ..     122     204 .. 0.64
   2 ?    5.6   0.0    0.0021       9.4     118     137 ..     370     389 ..     313     396 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00082
                 ----XXXXXXXXXXXXXXXXXXX CS
  PF03066.10 118 eddeedeeeeddeedddeeeeee 140
                 +d+e+++e+e+++e  de+  e 
  MMETSP1325-20131115|4427_1 168 NDQEDESEDESEDEPGDESGRER 190
                 33333333333333333332222 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0021
                 ----XXXXXXXXXXXXXXXX CS
  PF03066.10 118 eddeedeeeeddeedddeee 137
                 +++eed++ee d e dd+ e
  MMETSP1325-20131115|4427_1 370 KKEEEDSDEETDGEGDDDGE 389
                 55666666666666666544 PP

>> PF05053.8  Menin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.9   0.00033       1.5     474     554 ..     138     219 ..     112     229 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00033
   PF05053.8 474 eareGrrrgarkeekseepsgsesdn.pelpannknsnskknanegadkkeaaatagkaattengssasvqlpvsseapevk 554
                 e r  ++r++rk   + +psg++ +  p++++++++s+ + +++ g +     a  ++aa  e+  +  v++p++   pe++
  MMETSP1325-20131115|4427_1 138 ENRVPKKRAPRKTGGATKPSGGKKKAcPKKNDQEDESEDESEDEPGDESGRERAEEADAAAMEKARTDAVKIPATQVKPETQ 219
                 4555689**************987652666666666665555555666666667778888888999999****999999855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       502  (0.0367174); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.88u 0.36s 00:00:01.24 Elapsed: 00:00:00.57
# Mc/sec: 2045.17
//
Query:       MMETSP1325-20131115|4429_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|4426_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 936.35
//
Query:       MMETSP1325-20131115|4430_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|4432_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-06   26.8   0.5    2.2e-06   26.6   0.4    1.0  1  PF05462.6 Slime mold cyclic AMP receptor
    0.00018   21.0   0.9    0.00021   20.9   0.6    1.1  1  PF11710.3 G protein-coupled glucose receptor regulating Gpa2


Domain annotation for each model (and alignments):
>> PF05462.6  Slime mold cyclic AMP receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.4   3.2e-10   2.2e-06     116     170 ..       7      69 ..       3      75 .. 0.80

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 3.2e-10
   PF05462.6 116 ekyyyllcwglplistivmlakevvevvgnwcwig.....eeyv...gyrfglfygpfliifa 170
                 ++ y  +++g+pl+++ +  +++    +g wcwi+     ++y+   ++rf ++y+p+++i a
  MMETSP1325-20131115|4432_1   7 DRLYLAVAFGFPLVISTLPWSTDNFGSTGAWCWITsgpddDKYTsgtVWRFLVLYVPIWLIIA 69 
                 6889******************************6333335786322699******9877654 PP

>> PF11710.3  G protein-coupled glucose receptor regulating Gpa2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.6     3e-08   0.00021     123     185 ..       9      71 ..       2      76 .. 0.78

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 3e-08
   PF11710.3 123 vyvisv.lvPlllasLafinkregykplgawcylparpvwyrlvlswipryliv.vaivaiYisi 185
                 +y +++  +Pl+++ L        + ++gawc++++ p + ++    ++r+l++ v i  i ++i
  MMETSP1325-20131115|4432_1   9 LYLAVAfGFPLVISTLPWST--DNFGSTGAWCWITSGPDDDKYTSGTVWRFLVLyVPIWLIIAYI 71 
                 45544449*********988..899*************************987514454444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 292.89
//
Query:       MMETSP1325-20131115|4431_1  [L=392]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-10   40.6   1.0    6.1e-10   38.7   0.7    1.8  1  PF00149.23 Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.7   4.4e-14   6.1e-10      22     200 ..      23     260 ..       9     261 .. 0.83

  Alignments for each domain:
  == domain 1    score: 38.7 bits;  conditional E-value: 4.4e-14
                 HHHHHHHHTTTSEEEEE-TTSSGHHCHHHHHHHHH....HCCHHHHTTSCEEEE---TTTHHHHHHHHHSTTHHHHCHSTCSSTCCCEES..................................................T.......EEEEETTEEEEEEETTSHCSTCHHHHHHHHHHHHHHCCEEESEEEEEESSSSCHHHCTTTTH..SCCHHHHHHHHHHHHTTS..SEEEE-SSSS CS
  PF00149.23  22 illeiaaeekpdlvlflGDlvdrgdwssetlalld....ylvlklllpipvfllrGNHEsdpgnsaygflkeqakdprglanaeeeyeel..................................................s.......itllttsgelgglsglypllggeiqeeqleeflalplralvdgkilltHgplsssggssddigggelfgpdalekllekygv..dlvlrGHeHv 200
                  +  i +e  p ++l lGD+ +    ss    l+      +    +l +p+++++GNH++++g+    + +  ++   + +++ e y ++                                                  +       + ll+  +e       + + + +   eql + ++ ++ +++d++++++H p++s +  ++     + +    l ++le+ g   +l+++GH+H 
  MMETSP1325-20131115|4431_1  23 NVASIMGEYSPEFILALGDNMYDSGVSSVDDPLFKenyeDMFTADSLQVPWYVCAGNHDYYGGTAGIDAEMQYSD-KSDRWIYPELYYNKevtgsdgttfniisidtwrlnsgdtyvlhdpktgrnalrnesmihdhyarGmmnkgkrDVLLKQFKEEPKDTPIEARIQSSGDPEQLAWINETLATSKADWNLVIGHFPVYSATTGEHG---DTASLVADLMPILEESGGanTLYFSGHDHI 260
                 4667788999**********************999****9*********************98777666666665.555555555555556***********************9999999999999888888777766615666789999999999999999***************************************9877764...4667777777777776653469*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.61
# Mc/sec: 1539.95
//
Query:       MMETSP1325-20131115|4434_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-75  252.0   0.1    8.1e-75  251.9   0.1    1.0  1  PF00421.14 Photosystem II protein


Domain annotation for each model (and alignments):
>> PF00421.14  Photosystem II protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.9   0.1   5.9e-79   8.1e-75     165     330 ..       1     170 [.       1     171 [] 0.99

  Alignments for each domain:
  == domain 1    score: 251.9 bits;  conditional E-value: 5.9e-79
  PF00421.14 165 rlitgkvlnvavifgyelkspfnggg....vdnledivggHiavgilliigGifHllvrPlerlkkalvgsieavLsyslaavalaaFvaagtvwynnaayPielfGptryeadqaqeierrvrdaslseavssiqeklalykylgnsPakeilfrGemnkgddiaepwl 330
                 r+it+++ln+ vifgy l+spf+g+g    ++n+ed+vggHi+vg+l+++gGi+H++++P+ ++++a+v+s+ea+Lsyslaa++l+++ aa++ wynn+ayP+e++Gpt++ea+q+q+++++vrd++l+++v+s+q++++l+kyl++sP++ei+f+Ge+++++d+++pw+
  MMETSP1325-20131115|4434_1   1 RIITNPTLNPFVIFGYVLRSPFGGDGwimaINNMEDLVGGHIWVGVLCLTGGIWHITTKPFPWARRAFVWSGEAYLSYSLAALSLMGYSAAVYSWYNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDLRAPWV 170
                 68***********************************************************************************************************************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.57
# Mc/sec: 706.51
//
Query:       MMETSP1325-20131115|4437_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-21   73.3   0.1    9.9e-21   73.1   0.1    1.1  1  PF02229.11 Transcriptional Coactivator p15 (PC4)


Domain annotation for each model (and alignments):
>> PF02229.11  Transcriptional Coactivator p15 (PC4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.1   7.2e-25   9.9e-21      14      83 .]      21      94 ..       8      94 .. 0.84

  Alignments for each domain:
  == domain 1    score: 73.1 bits;  conditional E-value: 7.2e-25
  PF02229.11 14 s..esdaegdevlelskkrrvtvrefkgktlvdiReyYek..dGellPgkkGISLtleqwkkLkenieeiddal 83
                +   ++ ++  +++l+kk+   v+ fk+++lvdiRe+Ye+  + el+PgkkGISLtl+qw +L + ++ i+da+
  MMETSP1325-20131115|4437_1 21 KvvGVQTDDGIAFDLGKKKLLRVKTFKKMVLVDIREFYEDkqTEELKPGKKGISLTLAQWGELTKAMSGIQDAI 94
                233556666667***************************9878899************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|4435_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|4438_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 330.06
//
Query:       MMETSP1325-20131115|4438_2  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 328.39
//
Query:       MMETSP1325-20131115|4436_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-30  105.5   0.0    4.1e-30  104.8   0.0    1.3  1  PF00621.15 RhoGEF domain
    0.00065   19.7   0.0     0.0011   18.9   0.0    1.4  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00621.15  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.8   0.0     6e-34   4.1e-30       2     180 .]       5     192 ..       4     192 .. 0.84

  Alignments for each domain:
  == domain 1    score: 104.8 bits;  conditional E-value: 6e-34
                 HHHHHHHHHHHHHHHHHHHHHTHHHHHHC.TSS-HHHHHHHSTTHHHHHHHHHHHHHHHHH.......HHH--........------HHHHHHHH-HHHHHHHHHCTHHHHHHHHHHHHHH-HH..HHHHHH..HHGGG.TT--HHHHCTHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00621.15   2 ieElietErsYvrdLevlvevyieplkesksilseeeiksiFsnieeilklhkeflekLee.......rlkek........kdaqkigdvflkleeflkvYseYisnydkalkllkelskknsk..fkkflkeceespecskldLeslLikPvqRlprYplLLkellkqtpedhpdyedlekaleaikevasqiNe 180
                 ++E+ie+Er Yv+  +++v +  +++   ks +++++ ++iF+ +  +l++++++l++L e                     ++ +igd +  + +++k+Y++Y  +yd++   l++l+ ++++  f++ l e+ +  +++   ++ lLi+P+qR+prYplLL++l++ tpedh+d+ +l ka e i  va++ N+
  MMETSP1325-20131115|4436_1   5 LKEIIESERRYVEVVSTIVGI-GNDV---KSAMPADKYRMIFGTCGMLLNVNTQLLQHLDEvctshvaD---GvgagaavdWSSVCIGDKLNMFFPMFKLYTQYSDQYDAMALCLSQLMGDDDDtaFAQRLHEAMQ-AHQQTGAFQGLLIQPIQRIPRYPLLLDRLIELTPEDHSDHAALVKANEWITGVAQHLNK 192
                 79****************854.5777...568*****************************66665440...144444444667779999888************************9988885557666665555.3344555*************************************************996 PP

>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.7e-07    0.0011       2     103 ..     224     316 ..     223     317 .. 0.90

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1.7e-07
                 SBEEEEEEEETSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHHH CS
  PF00169.24   2 ikeGyllkksellktwkkryfvLtsnyLlyfksskkksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknll 103
                 ++ G l k   + +t +k++f+L+++ ++y k+      +   ++  l ++  +k+ + t+      +nn f++  +++ ++ l a s+e + +Wv+a +++l
  MMETSP1325-20131115|4436_1 224 VLRGDLIKIAAKDETEQKYHFFLFNDAIMYGKKIM----EGFYKIHRLMNLqGIKELPYTD-----GQNNRFVVIGDKK-EVMLGAASLEIKMQWVNAVQKSL 316
                 577899999999**********************7....7888888888887788888875.....89**********9.******************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 1935.88
//
Query:       MMETSP1325-20131115|4440_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.7   0.6      0.033   13.9   0.4    1.4  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.4   2.4e-06     0.033       3      21 ..      67      84 ..      66      85 .] 0.74

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.4e-06
                -SEEE.E.E----EEEEET CS
  PF00397.21  3 pgWeersddddGrvYYyNh 21
                p+W ++ d++ G +YY+N+
  MMETSP1325-20131115|4440_1 67 PEWLAAEDES-GETYYWNT 84
                5686544456.*******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.60
# Mc/sec: 339.48
//
Query:       MMETSP1325-20131115|4439_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   14.9   0.2      0.067   12.5   0.0    2.0  2  PF13713.1 Transcription factor BRX N-terminal domain
       0.64    9.7   5.8       0.83    9.3   4.0    1.2  1  PF05887.6 Procyclic acidic repetitive protein (PARP)


Domain annotation for each model (and alignments):
>> PF13713.1  Transcription factor BRX N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.084   5.7e+02       2      12 ..      14      24 ..      13      24 .. 0.86
   2 ?   12.5   0.0   9.8e-06     0.067      19      36 ..      65      82 ..      62      85 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.084
   PF13713.1  2 eEaakskaAKE 12
                eE ++ kaA E
  MMETSP1325-20131115|4439_1 14 EEKSNLKAALE 24
                9999****977 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 9.8e-06
   PF13713.1 19 aQLKdMaeKLsgayrhck 36
                + L+dM  KL+g y++ck
  MMETSP1325-20131115|4439_1 65 NKLHDMNGKLPGPYSECK 82
                679**************9 PP

>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   4.0   0.00012      0.83      51      86 ..      89     124 ..      69     125 .] 0.61

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00012
   PF05887.6  51 gaddtngtdrddepeeeeetepeeegeeetepeeeg 86 
                  ++d    d+++  +e  +tepe++ ee+++ e+e+
  MMETSP1325-20131115|4439_1  89 TTQDGHDMDHEPSDDELSDTEPEPTDEEQSDGEPEP 124
                 444444444444445555666666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 637.33
//
Query:       MMETSP1325-20131115|4433_1  [L=451]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-24   84.2  10.5    1.1e-23   83.7   6.9    1.6  2  PF07200.8  Modifier of rudimentary (Mod(r)) protein
    0.00059   19.1   0.1     0.0011   18.1   0.1    1.4  1  PF00179.21 Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.084   12.3   3.1      0.098   12.1   1.3    1.8  1  PF14379.1  MYB-CC type transfactor, LHEQLE motif


Domain annotation for each model (and alignments):
>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.9   8.5e+03      29      45 ..     108     124 ..     101     126 .. 0.75
   2 !   83.7   6.9   2.4e-27   1.1e-23       1     145 [.     266     411 ..     266     415 .. 0.96

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 1.9
                 -TTT---HHHHHHHHHH CS
   PF07200.8  29 vqdlneekeellaqnes 45 
                 +q l+  k+e+++qn++
  MMETSP1325-20131115|4433_1 108 LQLLKPLKHEWVNQNNQ 124
                 67788889999999987 PP

  == domain 2    score: 83.7 bits;  conditional E-value: 2.4e-27
                 --S-TTHHHHHHHHH-HHHHHHGGGGS--TTT---HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HH----HHHHHHHHHHHHHHHHHHHHHS-S----HHHHHHHHHHHHHHHHHHHHHH. CS
   PF07200.8   1 lkdlsldeLkeLlqdedkleefvkeldqvqdlneekeellaqnesLaeenlekepqleelkaqlqdkleelkkleekyeekkqkldel.sskyspealkelLqaaakkadeeseelaekflegeidletFlkkykekRtlyhlRrv 145
                 ++ ++ld+ ++Ll+d+ ++++ ++++d+v+++++ +e+++++n ++a+  l+ + +le+l+a++  +  el++l+e +++k q +     ++ s++a++++++ a++ a+eese++a +f++g+   ++F+kky+ +R +yh R +
  MMETSP1325-20131115|4433_1 266 IEAMTLDQVERLLRDDVAFSAHLMNMDSVKTMRDLREQVIEENAKIAQSTLQHRDELEALRAETLTLQLELQQLKEAFDAKAQVQIDAdAHRSSDNAVLNTIRLAVEVAEEESEDVASEFNNGDLTADAFVKKYLPLRAKYHQRNA 411
                 5789*****************************************************************************99776666*******************************************************75 PP

>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1   2.5e-07    0.0011      47     113 ..      91     159 ..      83     165 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 2.5e-07
                 EEEEEE--TTTTTS--EEEESS--SCTTB-----B.-HGGGSTTT--TT--HHHHHH.HHHHHHHS--T CS
  PF00179.21  47 FklkikfpeeYPfkPPkvkfvtkifHPnvdetGei.cldiLkeekWspaltlesvLl.siqsllaepnp 113
                 ++l+i +p+++P  PP +++ +++ H  v+++ ++     L + +W+ + +l + +   + +l+++pn+
  MMETSP1325-20131115|4433_1  91 YTLRIFLPRNFPEFPPVLQLLKPLKHEWVNQNNQVvGHAYLAKGTWNEHFELAQLVKeVLNELMNTPNT 159
                 899***************************777772557899999*********999567789999997 PP

>> PF14379.1  MYB-CC type transfactor, LHEQLE motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.3   2.2e-05     0.098       5      35 ..     327     356 ..     323     368 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.2e-05
   PF14379.1   5 aeaLrlQlEvQkrLhEQLEvqrdlqlrieaq 35 
                 ae+L lQlE+Q +L+E  ++  ++q+  +a+
  MMETSP1325-20131115|4433_1 327 AETLTLQLELQ-QLKEAFDAKAQVQIDADAH 356
                 58999******.*******999999886655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       678  (0.0495904); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.38s 00:00:01.16 Elapsed: 00:00:00.55
# Mc/sec: 1965.01
//
Query:       MMETSP1325-20131115|4444_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       610  (0.0446167); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.33s 00:00:00.95 Elapsed: 00:00:00.64
# Mc/sec: 1224.39
//
Query:       MMETSP1325-20131115|4445_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-22   79.9   0.2    1.6e-22   79.8   0.1    1.0  1  PF00149.23 Calcineurin-like phosphoesterase
     0.0074   16.0   0.0     0.0084   15.8   0.0    1.0  1  PF12850.2  Calcineurin-like phosphoesterase superfamily domain


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.1   2.3e-26   1.6e-22       3      94 ..       5      91 ..       3      99 .. 0.94

  Alignments for each domain:
  == domain 1    score: 79.8 bits;  conditional E-value: 2.3e-26
                EEEEEEBTBBHHHHHHHHHHHHHHHHHTTTSEEEEE-TTSSGHHCHHHHHHHHHHCCHHHHTTSCEEEE---TTTHHHHHHHHHSTTHHHHC CS
  PF00149.23  3 ilvigDlHgglddleglllilleiaaeekpdlvlflGDlvdrgdwssetlalldylvlklllpipvfllrGNHEsdpgnsaygflkeqakdp 94
                 +v+gDlHg+ +dl   l+i++  +a+e++  ++f+GD+vdrg+ s e+l  l  ++l  ++p++v+l+rGNHE++ + s ygf ke+ + +
  MMETSP1325-20131115|4445_1  5 CTVVGDLHGQIEDL---LHIIDVCGAPEQNLSYVFNGDFVDRGNTSVEILTVL--FALACAFPDNVYLNRGNHEDGDVCSMYGFAKECKSKY 91
                68************...************************************..*********************************9765 PP

>> PF12850.2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.2e-06    0.0084       4      61 ..       6      76 ..       4     101 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.2e-06
   PF12850.2  4 aiiSDlHgnldaleavledi...kevdlilhaGDlvep........eevvelledi..pvlavrGnhDeae 61
                 +++DlHg++++l  +++ +   ++   +++ GD+v++        + +++l+ ++  +v+  rGnh++ +
  MMETSP1325-20131115|4445_1  6 TVVGDLHGQIEDLLHIIDVCgapEQNLSYVFNGDFVDRgntsveilTVLFALACAFpdNVYLNRGNHEDGD 76
                699***********999999876667778889*****6666666634445555666777********9544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|4446_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 742.40
//
Query:       MMETSP1325-20131115|4447_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-07   30.2   0.0    4.8e-07   29.4   0.0    1.3  1  PF08190.7 pre-RNA processing PIH1/Nop17
  ------ inclusion threshold ------
       0.77    8.5   3.1        1.2    7.9   2.2    1.2  1  PF07466.6 Protein of unknown function (DUF1517)


Domain annotation for each model (and alignments):
>> PF08190.7  pre-RNA processing PIH1/Nop17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0     7e-11   4.8e-07     256     326 ..     204     274 ..     197     275 .. 0.87

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 7e-11
   PF08190.7 256 segvpkelvieieLPgv.ksvaevdLrvsedrlllevekekYrLdlkLpypvdeeeaeAkFnkkkktLtvtl 326
                 ++g+ +  vi++++ gv + +++vdL+v+ + + +++  ++  L ++Lp +v+ + ++AkF kkk  L+vt+
  MMETSP1325-20131115|4447_1 204 KDGSADVAVITVNMNGVvNGMSDVDLEVGGQAVRVVAAGKQ-PLLVDLPFTVNADVTKAKFSKKKGELKVTV 274
                 666777779999999863789*****************955.577*************************97 PP

>> PF07466.6  Protein of unknown function (DUF1517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   2.2   0.00017       1.2       6      89 ..     146     229 ..     141     247 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00017
   PF07466.6   6 GriGGgsfrap.srssssprssspsgggygsssssy.gggysgggfgfpflipifgfGggflglfgllilvaivgvlvnalrsagg 89 
                 G + G+  +ap +  + +++   p+++g++ s++++ +gg +ggg gf+   p++       g + + ++ + ++ +vn +     
  MMETSP1325-20131115|4447_1 146 GAMAGSAASAPsPAAADTGAPTMPKPSGGNLSPKGAaDGGVKGGGGGFA--PPTYLLNTSKDGSADVAVITVNMNGVVNGMSDVDL 229
                 99********964556667777777777777775565888888887877..68888888888999999999999999999876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1301.55
//
Query:       MMETSP1325-20131115|4441_1  [L=738]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.5    8.8   3.4          1    7.8   2.4    1.5  1  PF05502.8 Dynactin p62 family


Domain annotation for each model (and alignments):
>> PF05502.8  Dynactin p62 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.4   7.6e-05         1     127     203 ..      82     159 ..      56     213 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 7.6e-05
   PF05502.8 127 kerkerkeesstvseaeesssae.eeerskeateaeeaeaaaldvekrlaelkafyksqlaatesaesdplkldelka 203
                  + +er  + +  se ee+++a  ee+ + ++t++e   ++  d++ ++ael a++k+q+ + + + s+pl+ de++ 
  MMETSP1325-20131115|4441_1  82 TASTERAGKMEDDSEDEEVPPAVmEEDAPRRKTKSELRDQQIQDLKDQVAELMALIKDQMVQPAGVVSAPLQDDETAD 159
                 2222444444444555555555415666788888899999999**********************9999999877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (738 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       737  (0.0539058); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.22u 0.38s 00:00:01.60 Elapsed: 00:00:00.66
# Mc/sec: 2679.56
//
Query:       MMETSP1325-20131115|4442_1  [L=481]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-38  129.7   0.0    1.1e-37  128.8   0.0    1.5  1  PF05201.10 Glutamyl-tRNAGlu reductase, N-terminal domain
    1.9e-24   86.1   0.0    5.6e-24   84.6   0.0    1.8  1  PF01488.15 Shikimate / quinate 5-dehydrogenase
    8.3e-23   80.1   0.4    1.5e-22   79.3   0.3    1.4  1  PF00745.15 Glutamyl-tRNAGlu reductase, dimerisation domain
  ------ inclusion threshold ------
       0.44   10.7   7.6       0.14   12.3   2.4    2.2  2  PF06005.7  Protein of unknown function (DUF904)


Domain annotation for each model (and alignments):
>> PF05201.10  Glutamyl-tRNAGlu reductase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.8   0.0   3.2e-41   1.1e-37       2     152 .]      27     187 ..      26     187 .. 0.94

  Alignments for each domain:
  == domain 1    score: 128.8 bits;  conditional E-value: 3.2e-41
  PF05201.10   2 gvnhktapvelreklafseeeleealaql..keeegieevvilsTCnRtEiylasedaeaaveelsellaefkqlsleeleeylyvlegeeavrhlfrVasGLdSmvlGEpqIlgQvkrAyelak........eagtlgkiLerlfqkafavakrvrtete 152
                 g++h++a v++rekla++++++ +a a+l   ++ +iee+++lsTCnR+E+y++++d ++a ++ ++++ae ++ls   l+++l++l ge+a  hl+rV++GLdS+v+GE qIl+Qv + +++a+         ag  gk+L+r++++a+a +krvr+et+
  MMETSP1325-20131115|4442_1  27 GLSHHNAAVDVREKLAIPGDQWVAAAAELvaWSNGAIEEAAVLSTCNRFEVYFSARDSRQAMRAATTFFAERSGLSQGVLRRNLFMLAGEDASWHLLRVSAGLDSIVVGEGQILSQVSKCFQAATqvvddenpIAGSGGKVLSRMLNTAVASGKRVRSETS 187
                 89*****************99999999996567889*****************999999999***************************************************************7777766668999*********************95 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.6   0.0   1.6e-27   5.6e-24       9     135 .]     214     349 ..     207     349 .. 0.91

  Alignments for each domain:
  == domain 1    score: 84.6 bits;  conditional E-value: 1.6e-27
                 ...--EEEEE----HHHHHGGG--TTT-E.EEE----H...HHHHHHHHHH...T-EE---S-HHHHHHT-SEEEE-S--SS-SB-GGG-----.........EEEE-----SB-......-..---SEEHHHHHHH CS
  PF01488.15   9 slkgkkvlviGAGemarlvakhLlekgvkkiviaNRta...ekakeLaeelggeevealpleeleellaeadvvisatsapepiiekeaveeakkk.....lgllvDiavPRdvepevaele..dvrvynvddlkev 135
                  lk++ v ++GAG m rl+++hL+++gv ki+++NR++   ++a+eL+ee +++  e+ + +++ + +a advv  +ts++ pi+ +  + ea  +     +  +vDi+vPR+v+++v++le  +++ ynvddlk v
  MMETSP1325-20131115|4442_1 214 PLKECGVAIVGAGTMTRLLVTHLKSHGVDKITLINRSIgpgSRAAELVEENPDVAWELATPDQMYDKIAGADVVYMSTSSEVPIVDRAGLAEAGLNardrpI-DIVDISVPRNVDADVSDLEgdGIFSYNVDDLKAV 349
                 488999*******************************86668********************************************9999998844567765.79**************9973369********975 PP

>> PF00745.15  Glutamyl-tRNAGlu reductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   0.3   4.3e-26   1.5e-22       2     101 .]     363     463 ..     362     463 .. 0.97

  Alignments for each domain:
  == domain 1    score: 79.3 bits;  conditional E-value: 4.3e-26
  PF00745.15   2 eAeaIIeeeveefeewlkslevvplIralrekaeeireeelekalkkla.lgedpeevleklarsltnkllhaptkalreaaadgdadellealrrlfdld 101
                 eAe++ +ee + +  w +sl + p+I +l+e+ae +ree ++k  kkl+ l+e++++++++l+r+++nkllh+p+++lr+ ++++d+ + l++l ++f+l+
  MMETSP1325-20131115|4442_1 363 EAEKLLREEHQGYHGWHQSLGAIPTITKLQERAEVMREEVMKKENKKLRdLSEKERDAVDRLSRGIVNKLLHGPMSHLRSPESAEDKRRSLNTLGSMFKLE 463
                 7**********************************************555********************************99999***********986 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.42   1.4e+03      38      57 ..     355     374 ..     342     382 .. 0.75
   2 ?   12.3   2.4   4.2e-05      0.14      16      69 ..     384     432 ..     379     434 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.42
                 HHHHHHHHHHHHHHHHHH-- CS
   PF06005.7  38 keeneeLeeenkklkeerea 57 
                 +  ++e+ e  k l+ee++ 
  MMETSP1325-20131115|4442_1 355 AARRKEIIEAEKLLREEHQG 374
                 36788999999999999985 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 4.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....HHH---TTHHHHH---- CS
   PF06005.7  16 AvdtialLqmeieeLkeeneqlkeeneeLeeenkklk....eereawqerlralLgkl 69 
                 A+ ti++Lq++ e  +ee          +++enkkl+    +er+a+++  r++++kl
  MMETSP1325-20131115|4442_1 384 AIPTITKLQERAEVMREE---------VMKKENKKLRdlseKERDAVDRLSRGIVNKL 432
                 899*************96.........99********999999999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       559  (0.0408865); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.61
# Mc/sec: 1889.59
//
Query:       MMETSP1325-20131115|4448_1  [L=439]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-29  101.3   0.1      7e-29  100.8   0.1    1.2  1  PF00557.19 Metallopeptidase family M24


Domain annotation for each model (and alignments):
>> PF00557.19  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.8   0.1   5.1e-33     7e-29       2     184 ..      36     247 ..      35     272 .. 0.80

  Alignments for each domain:
  == domain 1    score: 100.8 bits;  conditional E-value: 5.1e-33
                 HHHHHHHHHHHHHHHHHHH-----BHHHHHHHHHHH...HHHTT...........TTCGCS-SCCEEEECCCCE----..-S-B..-----EEEEEEEEEETTEEEEEEEEEE--....GHH-......HHHHHHHHHHHHHHHHHH-----BHHHHHHHHHHHHHT..-E.E--S-------.-SS-S---SS.......TT---B-----EEEE-- CS
  PF00557.19   2 lirkAgriaaaaleavlreikpgvterelaalieaa...lkreg...........akgqafppivasgenaallhytp..ndrv..lkdgdlvlldvgaeydgyasditrTvvvg....ftpe......qrelyeavleaqeaaiaavkpGvtlseihaaaekvleegGlseffphglGHgvglevhdepsvsr.......kgrgrkleegmvftieP 184
                 ++r+Ag+ia+++le v++++  g+++++++++++     l   g           +kg afp  ++++ n++l+h +p  +d++  l +gd+v++d+g+++dg+++ +++T+vvg    +  e        ++++a   a e a+++++pG+t ++++ a  kv+e+ G +  ++  l H + + v d   v         k +++++e ++++++  
  MMETSP1325-20131115|4448_1  36 KYREAGKIANKVLEGVIQQCTVGASVKDICEFGDTVigsL-TAGiyqkkvngqaiDKGCAFP--TCISLNECLCHNSPlsSDAPtlLAEGDVVKIDLGVHIDGFIAVVAHTMVVGatpsA--EtptdgpLGNIMKASHIASEVATKMIRPGNTNQQVTSALAKVAETFGVN-LCAGVLSHQMKRYVIDGNKVILlkedqdqKVDDQVFEVNETYSVDI 247
                 8***************999***************664432.222444556678899999***..************99864444779****************************66330..2555778888**********************************98885.7788999**9997776644311122332222677777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.39s 00:00:01.14 Elapsed: 00:00:00.60
# Mc/sec: 1753.33
//
Query:       MMETSP1325-20131115|4449_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-24   84.7   1.0    1.4e-15   56.6   0.0    2.0  2  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   1.6e-10   2.1e-06      48      92 ..       5      49 ..       2      53 .. 0.90
   2 !   56.6   0.0     1e-19   1.4e-15       9      94 ..      62     145 ..      57     147 .. 0.94

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 1.6e-10
                HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22 48 ldalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkll 92
                ++++k+++ ++G rg+y Gl ++ +r+ p  a+ f++ye    ll
  MMETSP1325-20131115|4449_1  5 FKMMKTVWAKQGARGFYTGLEAQAMRDGPFYAVFFGSYEISVYLL 49
                57899**********************************876666 PP

  == domain 2    score: 56.6 bits;  conditional E-value: 1e-19
                 HH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH-G CS
  PF00153.22   9 llaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkllsk 94 
                 +++G+iAg++++ ++ P+d  K  +q  a+  +     + +++k ++++ G+ gly G+ p++ r +pa+a+ f+ ye +k+ l++
  MMETSP1325-20131115|4449_1  62 FISGGIAGMVGWGAVIPFDGPKSIIQ--ASWTTGVTGDFASTFKDVVRQRGFGGLYAGFAPAMCRAFPANAALFLGYEITKRGLND 145
                 89************************..7777888899********************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 791.84
//
Query:       MMETSP1325-20131115|4450_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-36  124.4   0.0    3.7e-36  124.4   0.0    1.0  1  PF00310.16 Glutamine amidotransferases class-II
  ------ inclusion threshold ------
       0.13   12.0   0.0       0.19   11.5   0.0    1.3  1  PF13522.1  Glutamine amidotransferase domain


Domain annotation for each model (and alignments):
>> PF00310.16  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.4   0.0   5.4e-40   3.7e-36     159     239 ..      15      99 .]       1      99 [] 0.90

  Alignments for each domain:
  == domain 1    score: 124.4 bits;  conditional E-value: 5.4e-40
                 H....BEES...SSEEE......GGG....BHGGCCCEEEECEEEB--C--SSSS-SCTTSSSEEEEEEE---TTHHHHHHHHHH CS
  PF00310.16 159 v....fYicslssrtivYKGlltpeqlkkyyeDLkdeefksalaivHvRfsTntspswenahPfrvlahNGeintikgnknllka 239
                      +Yicsl ++t+ YKG++++ +l ++y+DL+d++fk ++ai+H+RfsTnt p+w++a+P+r+l hNGeint+ gn n+++a
  MMETSP1325-20131115|4450_1  15 LgpdgLYICSLGEKTVTYKGMVNSYSLGTFYKDLEDPRFKCRFAIYHRRFSTNTTPKWPLAQPMRMLGHNGEINTLLGNVNWMRA 99 
                 244458*****************************************************************************85 PP

>> PF13522.1  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.8e-05      0.19      13      51 ..      56      88 ..      31      93 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.8e-05
   PF13522.1 13 evvlgHvRlatvglseeegaqPfssedgrvvlvhNGeiy 51
                + ++ H+R +t+  ++   aqP+       +l hNGei 
  MMETSP1325-20131115|4450_1 56 RFAIYHRRFSTNTTPKWPLAQPM------RMLGHNGEIN 88
                4899*******************......7899***996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|4443_1  [L=644]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.5e-192  639.1   0.0   4.1e-192  638.9   0.0    1.0  1  PF00463.16 Isocitrate lyase family
    7.7e-12   44.8   0.0    1.5e-11   43.8   0.0    1.4  1  PF13714.1  Phosphoenolpyruvate phosphomutase
  ------ inclusion threshold ------
       0.07   12.4   2.2       0.23   10.8   1.5    1.9  1  PF06568.6  Domain of unknown function (DUF1127)


Domain annotation for each model (and alignments):
>> PF00463.16  Isocitrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  638.9   0.0    9e-196  4.1e-192       1     524 [.     107     629 ..     107     631 .. 0.94

  Alignments for each domain:
  == domain 1    score: 638.9 bits;  conditional E-value: 9e-196
  PF00463.16   1 eveevkkwWsdsrwrktkrpysaedivkkrGtlkieyasseqakklfkllekeekkk..tvsstfgaldpvqvtqmakyldtvyvsGWqssstastsnepsPdladyPmdtvPnkvehlfkaqlfhdrkqkeerlelskeerekl.ayvdylrPivadadtGfGGltavlkltklfierGaagihiedqasgtkkcGhmaGkvlvpiqehinrlvairlaadilgsdlllvartdaeaatlitstidtrdhefivGatnpdleeladllseaeaegksgaelqaiedewlkkaglklfeeavvdeieksk....lsnkkelikkftkkvkplselsnkearklakellg.kd.i.ffdwelprvreGyyrykggvecaisrglayaPyadliWmesklPdleqakefaegvkakyPeqllaynlsPsfnWkkals.sdeqetfikrlaklGyvwqfitlaGlhttalivddfakayakeGmkayvekvqqpeiddGvdvvkhqkwsGaeyidkllklvqGGvsstaalgkgvted 524
                 +v ++k+ Ws+++w+ ++rpysae+++++r  +  ++  + ++k+l +ll + ++++    s+t+galdpvqv+ ma +l t+yvsGWq+sstas+s ep+Pd adyPmdtvP+kv++l  a+l+h+r+q+++  +l+ eer++   +  +lrPi+ad+d+G+GGltav+kltk+fie+Gaag+h+edq +gtkkcGhm+Gkvlv++qehi+rlva+rl+ad +g++++ vartdae atl+ s+id+rdh +i+Gat + + +l++ l+       +g +     ++wl++a+l++f eav ++++++      ++ +e ++ + ++  p + ls  +ar  a++llg  + + ffdwe+pr+reGyy+++gg+e++ +rg+a++P++dl+Wme++ P l++akefae vkakyP+q+laynlsPsfnW+++ + ++e+++f   l+kl y+wqfitlaG+ht+ l++ +fakaya++Gm  yv  vq+ e++ G+++++hq wsGae +d  + +++GG sstaalg+g te 
  MMETSP1325-20131115|4443_1 107   629
                 6899**********************************************9876664226799***********************************************************************9999988887736799************************************************************************************************************.66777776666.......33333....57*******************99866667788999********************998888763332359***************************************************************************98650556*********************************************************************************************996 PP

>> PF13714.1  Phosphoenolpyruvate phosphomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.0   3.3e-15   1.5e-11      47     146 ..     208     342 ..     182     353 .. 0.80

  Alignments for each domain:
  == domain 1    score: 43.8 bits;  conditional E-value: 3.3e-15
   PF13714.1  47 pDgelltleelleavrriaevvd............................lPlivDledGygespedvaetvkrliaaGavGvniEDk.....kdnr.aerqllsieefaekiaaaraaakeag..fvinARtda 146
                 pD  + +++++ + v ++++++                              P+i+D ++G g     v ++ k +i+aGa+Gv++ED+     k+++ +++ l+s++e+ +++ aar +a++ g   v +ARtda
  MMETSP1325-20131115|4443_1 208 PDFADYPMDTVPKKVDQLTRAMLhhnrrqrqalsrltpeeraehpmpsqflRPIIADGDAGHGG-LTAVMKLTKMFIEAGAAGVHFEDQkagtkKCGHmGGKVLVSTQEHIDRLVAARLQADAMGaeTVFVARTDA 342
                 6777777777777777777765556677777777777777777777777779**********99.99**********************7765444445777888***************9999999999*****9 PP

>> PF06568.6  Domain of unknown function (DUF1127)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.5     5e-05      0.23      11      27 ..     231     247 ..     224     247 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 5e-05
   PF06568.6  11 rerRrtrreLseLsDre 27 
                 +++Rr+r++Ls+L+++e
  MMETSP1325-20131115|4443_1 231 HHNRRQRQALSRLTPEE 247
                 79************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (644 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.00u 0.37s 00:00:01.37 Elapsed: 00:00:00.93
# Mc/sec: 1659.41
//
Query:       MMETSP1325-20131115|4453_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 688.95
//
Query:       MMETSP1325-20131115|4452_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.2    5.9  21.9        2.8    5.6  15.2    1.0  1  PF04147.7 Nop14-like family


Domain annotation for each model (and alignments):
>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  15.2    0.0002       2.8     260     415 ..      55     248 ..      53     268 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0002
   PF04147.7 260 ferRaqpadRtKTeeElakeeaerlkklEeeRlrRmrgeeeddeeeedse..........kesaddlddefe...........................edddenfglgsaeeeeeeee.eegvededeeeddddee......eeeedvdedeeeedeedeesddeeeeeeeee....aseeeaeakkkkkktkkkkksaeetk 415
                 fe +a+  dRt + +E  + + +r++  Eee  +R     ++d  + +            +                                      +d ++n+  + +++e+e ee e g++++ e+ +d + e      ++e  +   e+ e   ++++   + e +++e    a+++e +a+ ++++ ++ + +++++ 
  MMETSP1325-20131115|4452_1  55 FEDKAADDDRTFSTDETLRANLKRVESMEEENRKRSGSGSKADTFKAAAAekaaqlkqgaA----------RsaerfregaaiaatnfkngsarlvkqvSDMAHNLTASPENSEDEAEEeEGGKATSGEAAKDGEGEgeteagATEGGAVAAEDTEGGAKASEGTTDGEATASEagepAAAAEPTAAAEDTAAAATADATDAAP 248
                 99***************************99999975544444333333224455533332..........1334444666688888888888999998777777766655444444442333444444444433332111132222222222222222222222222222222232322222222222222222222233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       774  (0.0566121); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.46s 00:00:01.00 Elapsed: 00:00:00.57
# Mc/sec: 1156.86
//
Query:       MMETSP1325-20131115|4455_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.44s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 511.53
//
Query:       MMETSP1325-20131115|4451_1  [L=974]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   12.6   0.5      0.097   11.7   0.3    1.4  1  PF07569.6 TUP1-like enhancer of split
       0.18   11.3   0.0       0.56    9.7   0.0    1.8  2  PF13589.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase


Domain annotation for each model (and alignments):
>> PF07569.6  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.3   1.4e-05     0.097     146     195 ..     605     654 ..     571     668 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.4e-05
   PF07569.6 146 graktlqrlakallskegfesleetvtiahLEnriaaaelLgskeefrkw 195
                  r++ lq+  +a ++k+ +++ e++ +++ LE+r+aaa +L  + e +++
  MMETSP1325-20131115|4451_1 605 ARERVLQESLEACRMKQVSTEQEHLRSLKRLEERVAAADTLAMQLEVQRM 654
                 78999*************************************99998764 PP

>> PF13589.1  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.72   4.9e+03       4      21 ..      26      43 ..      25      60 .. 0.74
   2 ?    9.7   0.0   8.2e-05      0.56      52      99 ..     102     148 ..      96     181 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 0.72
   PF13589.1  4 edAiaelvdNsldAdatn 21
                ++ + e+v+N +d+++++
  MMETSP1325-20131115|4451_1 26 WEGVREMVQNWYDGQLET 43
                56789********99887 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 8.2e-05
   PF13589.1  52 n.alklgrsskdeekeektlGrkGiGmklAslklgrkvtviskkegeks 99 
                 + al lg s+k+  +++k +G +G Gmk  +l l r+   +s   g++ 
  MMETSP1325-20131115|4451_1 102 RqALLLGFSKKA--ENRKAVGHFGEGMKVGALALLRNGCSVSMDTGDER 148
                 447888899888..589****************9998777776665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (974 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       732  (0.0535401); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.32u 0.42s 00:00:01.74 Elapsed: 00:00:00.69
# Mc/sec: 3382.68
//
Query:       MMETSP1325-20131115|4456_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-41  141.0   0.0    5.1e-41  140.7   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.7   0.0   3.7e-45   5.1e-41     139     309 ..      27     202 ..       6     206 .. 0.91

  Alignments for each domain:
  == domain 1    score: 140.7 bits;  conditional E-value: 3.7e-45
                 ---B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE...----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--......-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT CS
  PF00632.20 139 anipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteyd...ggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrks.....ededrLPtasTCfnyLkLpdYsskeilkekLltAieeg 309
                 ++ p   +n+ e+++++ + +lk  +++ l+af+ G+ + +p   l lftpeele l+cG+++ id+e l+++teyd   +g +++ p+i+++w +l+++++ +r++f+ Fv++ srlP   + e+  +f+i+  +     +++++LP+++TCf +L Lp Yss+++++++Ll+Aie++
  MMETSP1325-20131115|4456_1  27 HEEPLSAANRAEFVRQVEHRHLKA-MNPVLTAFLTGLGTAVPAPFLPLFTPEELEVLLCGKPE-IDIELLKKVTEYDtsvEGVTEDAPHIQYFWAALEQMDQVQRANFINFVSARSRLPN-SVDEFPMNFKIQGPKpgaksDPDKHLPSSQTCFFTLSLPFYSSQQVCYQRLLYAIENA 202
                 56788999*********9988888.9*************************************.************96566777***********************************8.78888889**999888998777779*******************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 945.71
//
Query:       MMETSP1325-20131115|4457_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-63  213.1   0.0    6.6e-63  212.4   0.0    1.3  1  PF00112.18 Papain family cysteine protease
    1.8e-05   23.3   0.2      0.015   13.7   0.0    2.1  2  PF03051.10 Peptidase C1-like family
    0.00013   22.0   0.1    0.00023   21.2   0.1    1.4  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.4   0.0   1.4e-66   6.6e-63       1     218 [.     100     322 ..     100     324 .. 0.92

  Alignments for each domain:
  == domain 1    score: 212.4 bits;  conditional E-value: 1.4e-66
                 -TSB--CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-TTTS-.....TT----HHHHHHHHHHC---BBTTTS---....SSC-.S--CCCC--C.CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCT..TC-EEEEE-SB-TT------EEEESSSS..SGGGTTSSEEE CS
  PF00112.18   1 lpesvDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCskeene.....gCnGGlmenafeyikknggivtekdypYk....akeggkCkkkkkkekevakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygven..gkkyWivkNSWgtdwGekGYiriargkn..necgieseavy 218
                 lp svDwrek+  v+pvk+qg+CGsCWaf++++++e+++a+++ ++l+slS q+lv C  + ++     gC G ++e a++y+++ gg+++e +ypY     a+ +g+C ++ +  k   +i+gy+k++en+ +a+++ala++gP++++idas +  +lY+sGv+++ + ++ e++h v +vGyg+++  g++yW+v+NSW+ ++Ge+GYir++r+    + cg+++++++
  MMETSP1325-20131115|4457_1 100 LPPSVDWREKG-VVSPVKNQGHCGSCWAFATTATVESHVALNS-GNLFSLSPQQLVACAPNDDKcggvgGCMGSIPELAYDYLVSAGGMAEEWSYPYVsysgAT-NGTCLEEPEV-K--ITIDGYVKLPENNATAVMAALAHVGPLAINIDASVW--HLYESGVFDGCSYDDMEIDHVVELVGYGTDDesGVDYWLVRNSWSPTFGENGYIRLKRDPVdeTPCGVDDQPTM 322
                 699******85.*******************************.7*************995555899*****************************99666333.3899998653.4..79********************************95..9*********98899**************99889************************8665678999988765 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00024       1.1      57      79 ..     114     136 ..     105     149 .. 0.85
   2 !   13.7   0.0   3.2e-06     0.015     354     399 ..     261     306 ..     256     312 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00024
  PF03051.10  57 evtnqkqsGRCWlFaalnvlRlk 79 
                 +v nq + G CW Fa++ ++  +
  MMETSP1325-20131115|4457_1 114 PVKNQGHCGSCWAFATTATVESH 136
                 899*************9988655 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 3.2e-06
  PF03051.10 354 ygeslmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfvmsd 399
                 y++ +++H + l+g   dd+  v  w v nsW    Ge+Gy  +  
  MMETSP1325-20131115|4457_1 261 YDDMEIDHVVELVGYGTDDESGVDYWLVRNSWSPTFGENGYIRLKR 306
                 778899***********************************87665 PP

>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1     5e-08   0.00023       2      53 ..      19      65 ..      18      68 .. 0.79

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 5e-08
   PF08246.7  2 eswmdaygkkYrhsseinerfenFkeNlrqiqehNanknvtftlglNkfsDl 53
                e+w+++++ k  +++e     + F +Nl  i ehNan++ +++ g+N+f  +
  MMETSP1325-20131115|4457_1 19 EEWCEHFNAK--PTEEGR---KEFAKNLAMILEHNANPSASYKRGVNQFTAM 65
                6677777776..333333...459*************************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.59
# Mc/sec: 1454.06
//
Query:       MMETSP1325-20131115|4460_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0029   17.0   4.9      0.003   17.0   3.4    1.2  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
     0.0084   15.5   1.8       0.01   15.3   1.2    1.2  1  PF08216.6  Eukaryotic domain of unknown function (DUF1716)
  ------ inclusion threshold ------
       0.03   14.1   1.9       0.03   14.1   1.3    2.1  1  PF14197.1  Centrosome localisation domain of PPC89
       0.04   13.2   5.0      0.047   13.0   3.0    1.6  1  PF04977.10 Septum formation initiator
      0.046   13.7   2.7       0.18   11.8   1.8    1.8  2  PF03670.8  Uncharacterised protein family (UPF0184)
      0.077   13.1   5.6      0.087   13.0   3.9    1.1  1  PF03234.9  Cdc37 N terminal kinase binding
       0.11   12.0   6.5       0.12   11.9   4.5    1.2  1  PF06476.7  Protein of unknown function (DUF1090)
       0.17   11.5   1.4       0.21   11.2   0.8    1.3  1  PF02787.14 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
       0.21   11.1   1.9       0.23   11.0   1.3    1.0  1  PF03041.9  lef-2
       0.21   11.2   8.9       0.22   11.2   6.2    1.1  1  PF10211.4  Axonemal dynein light chain
        0.3   10.5   9.8       0.32   10.4   6.8    1.1  1  PF04156.9  IncA protein
       0.82    9.9   5.1        2.2    8.5   3.2    2.0  1  PF04102.7  SlyX
       0.82    9.0   4.7       0.93    8.8   2.7    1.5  2  PF04521.8  ssRNA positive strand viral 18kD cysteine rich protein
        1.2    9.4   6.5        1.7    8.8   4.5    1.5  1  PF06156.8  Protein of unknown function (DUF972)
        1.4    8.4   9.6        1.5    8.3   6.7    1.1  1  PF03962.10 Mnd1 family
        1.6    6.3   6.5        1.5    6.4   4.5    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
        2.9    7.4   7.3        3.7    7.1   5.1    1.2  1  PF08286.6  Spc24 subunit of Ndc80
          6    5.6   7.6        5.9    5.6   5.3    1.1  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   3.4   3.9e-06     0.003      63     110 ..      25      72 ..       3      80 .] 0.84

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 3.9e-06
   PF07106.8  63 qdqlellsdeelnkldaeieelreevqelkqeiselekelkkLtselt 110
                 +++ +++ +ee++k++a+i+ l+e +qel+++++e  +  + +t+++ 
  MMETSP1325-20131115|4460_1  25 DEEAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNRIITQAMR 72 
                 457899*****************************9999998888753 PP

>> PF08216.6  Eukaryotic domain of unknown function (DUF1716)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.2   1.3e-05      0.01      10      54 ..      20      62 ..      12      78 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.3e-05
   PF08216.6 10 ealeadeedevevldesslKklvlalekrlrkNqelRikfpddpe 54
                +++++dee  ++v+ ++++Kk+  +++  +++Nqel  kf++  e
  MMETSP1325-20131115|4460_1 20 NKMQQDEE--AKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGE 62
                34444444..68****************************98654 PP

>> PF14197.1  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.3   3.9e-05      0.03       2      23 ..      38      59 ..      37      79 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.9e-05
   PF14197.1  2 rLeaevktLrnrldsltrkvqv 23
                ++ea++ktL +r+ +l+rk + 
  MMETSP1325-20131115|4460_1 38 KMEAQIKTLSERNQELQRKFEE 59
                9******************875 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.0   6.1e-05     0.047      22      59 ..      32      68 ..      15      74 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 6.1e-05
  PF04977.10 22 lkqeiaalqaelaklkaeneeLeaevkdLksdedyiee 59
                 ++e+++ +a++++l+++n+eL+++ ++   + ++i  
  MMETSP1325-20131115|4460_1 32 RNEEMKKMEAQIKTLSERNQELQRKFEET-GESNRIIT 68
                699********************999988.55555554 PP

>> PF03670.8  Uncharacterised protein family (UPF0184)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.68   5.2e+02      45      63 ..       4      22 ..       2      32 .. 0.83
   2 ?   11.8   1.8   0.00024      0.18      31      71 ..      31      72 ..      19      79 .. 0.78

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.68
   PF03670.8 45 lEernDdlnskLrELlesn 63
                 Ee+   l ++L  Ll+  
  MMETSP1325-20131115|4460_1  4 AEEKVKTLGGRLSFLLNKM 22
                5899999999999999865 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00024
   PF03670.8 31 i.nsmLDqinsaLDalEernDdlnskLrELlesnRqiRlefa 71
                + n+ + ++++ +  l ern +l+ k +E  esnR i + ++
  MMETSP1325-20131115|4460_1 31 VrNEEMKKMEAQIKTLSERNQELQRKFEETGESNRIITQAMR 72
                347889999999***********************9877666 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.9   0.00011     0.087      28      82 ..      16      70 ..      13      80 .] 0.84

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00011
   PF03234.9 28 Sfirwkqqaihekreqrkkeieelekelkinkkllervdkllselkeeeelssek 82
                Sf+  k q+  e +  r++e++++e+++k+ ++++++++++ +e+ e++   +++
  MMETSP1325-20131115|4460_1 16 SFLLNKMQQDEEAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNRIITQA 70
                89999999************************************99886554443 PP

>> PF06476.7  Protein of unknown function (DUF1090)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   4.5   0.00016      0.12      52     109 ..      19      77 ..       2      80 .] 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00016
   PF06476.7  52 LkevkanCtdagllaereakveekeeevaerekeLkea.kakgdadkiekkqkKLaeaq 109
                 L++++++ + + +++e+++k+e++ + ++er++eL+   +++g++++i ++  +L+e++
  MMETSP1325-20131115|4460_1  19 LNKMQQDEEAKVVRNEEMKKMEAQIKTLSERNQELQRKfEETGESNRIITQAMRLKEEE 77 
                 5666666677788999*******************8651677999***********987 PP

>> PF02787.14  Carbamoyl-phosphate synthetase large chain, oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.8   0.00028      0.21      44      87 ..      34      78 ..      29      80 .] 0.90

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00028
  PF02787.14 44 keiveleeelkk.eelleellreaKklGfsDaqiakllgvteeev 87
                +e+ ++e+++k+ +e ++el r++ + G s++ i ++++ +eee 
  MMETSP1325-20131115|4460_1 34 EEMKKMEAQIKTlSERNQELQRKFEETGESNRIITQAMRLKEEEM 78
                57889*******8888899*******************9999986 PP

>> PF03041.9  lef-2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.3    0.0003      0.23      44     109 ..       7      72 ..       2      79 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0003
   PF03041.9  44 yvlvsglrllnLlkkkkeeeesekkkkkkkskrnvCfkdvaksrkevikllrkklklpaciekalk 109
                  v+  g rl+ Ll+k +++ee++ +++++ +k +  +k+ ++ ++e+ +++++  +++  i++a++
  MMETSP1325-20131115|4460_1   7 KVKTLGGRLSFLLNKMQQDEEAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNRIITQAMR 72 
                 5778899*******************99999***********99*******999999999998886 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   6.2   0.00029      0.22     107     161 ..      14      68 ..       2      80 .] 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00029
   PF10211.4 107 svafglrkaleaeqgkselekeikkleeekeeLekevkelekkleeiekreeeer 161
                 ++ f l+k  + e+ k   ++e+kk+e +++ L+++++el++k ee+ +++    
  MMETSP1325-20131115|4460_1  14 RLSFLLNKMQQDEEAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNRIIT 68 
                 6788899999999999999999999999999999999999999999876655433 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   6.8   0.00042      0.32      91     164 ..       2      74 ..       1      80 [] 0.53

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00042
   PF04156.9  91 seleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelr 164
                 +++ee++ +l  rl+ l  + ++ ee++   +ee k+ e+++++l+e+ +el+++++e+  e  +   ++ +l+
  MMETSP1325-20131115|4460_1   2 QQAEEKVKTLGGRLSFLLNKMQQDEEAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETG-ESNRIITQAMRLK 74 
                 455556666666666666666666666666666666666666666666666666666666.3333333333333 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.2    0.0029       2.2       3      57 ..       5      58 ..       3      69 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0029
   PF04102.7  3 eerieeLEiklafqedtieeLNevvaeqqkeidrlqrqlrllaerlkeleessne 57
                ee+++ L  +l+f  +  ++  e+ +  ++e++++++q++ l+er +el+  + e
  MMETSP1325-20131115|4460_1  5 EEKVKTLGGRLSFLLNKMQQDEEAKVVRNEEMKKMEAQIKTLSERNQELQ-RKFE 58
                66666666777777666666667777778999999999999999999999.4433 PP

>> PF04521.8  ssRNA positive strand viral 18kD cysteine rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.43   3.3e+02      77     103 ..       4      29 ..       2      38 .. 0.59
   2 ?    8.8   2.7    0.0012      0.93      66     114 ..      28      76 ..      20      80 .] 0.80

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.43
   PF04521.8  77 leleLekLerreeqLktqiqkltaaak 103
                 +e++ ++L  r   L+ ++q+  ++ak
  MMETSP1325-20131115|4460_1   4 AEEKVKTLGGRLSFLLNKMQQ-DEEAK 29 
                 566777777777777777777.33333 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0012
   PF04521.8  66 slawrsaqlseleleLekLerreeqLktqiqkltaaaklakaekevkak 114
                 +  +r++++++ e+++++L +r+++L+ ++++  +++++++ +  +k++
  MMETSP1325-20131115|4460_1  28 AKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNRIITQAMRLKEE 76 
                 55678999999*******************9988888877776666654 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   4.5    0.0023       1.7       8      42 ..      34      68 ..       2      80 .] 0.56

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0023
   PF06156.8  8 dklseleeqleelleeleelkkelkelleenaelk 42
                ++++++e q+++l e  +el+++++e+ e n  ++
  MMETSP1325-20131115|4460_1 34 EEMKKMEAQIKTLSERNQELQRKFEETGESNRIIT 68
                34444555555555555555555555544444433 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   6.7    0.0019       1.5      73     145 ..       3      76 ..       1      80 [] 0.65

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0019
  PF03962.10  73 klkkeleelkqrikelqaeiekekkkreet.eereelleelkeleeelkklkkeleklakldpekveklkeete 145
                 +++++++ l  r++ l ++++++++ +    ee +++  ++k+l+e++++l++++e++ +++    + ++ + e
  MMETSP1325-20131115|4460_1   3 QAEEKVKTLGGRLSFLLNKMQQDEEAKVVRnEEMKKMEAQIKTLSERNQELQRKFEETGESNRIITQAMRLKEE 76 
                 55666666666666666666666544444436667778888888888888888888888887777777765555 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   4.5     0.002       1.5      65     116 ..      24      76 ..       2      80 .] 0.69

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.002
                 XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14  65 esk.evedleeeleeleeelkeveeslesLekelneleelrnvlreekeflee 116
                 +++     ++ee++++e+++k + e +++L+++++e  e + +++++ +  ee
  MMETSP1325-20131115|4460_1  24 QDEeAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNRIITQAMRLKEE 76 
                 32213344677889999999999999999999999999999998888776665 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   5.1    0.0049       3.7       2      45 ..      23      66 ..      22      80 .] 0.83

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0049
   PF08286.6  2 eeldnekvrlakelndleselenlqseleelkeeleeleeqene 45
                ++ ++ kv   +e++++e++++ l++  +el+++ ee+ e+++ 
  MMETSP1325-20131115|4460_1 23 QQDEEAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNRI 66
                678999999****************************9887765 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   5.3    0.0077       5.9      35     101 ..       7      65 ..       1      79 [. 0.73

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0077
   PF10186.4  35 eketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkeala 101
                 + +tl+ +++ +l+        + qq   +++ ++e+++++ ++i++l e+ ++++++ ee  e+++
  MMETSP1325-20131115|4460_1   7 KVKTLGGRLSFLLN--------KMQQDEEAKVVRNEEMKKMEAQIKTLSERNQELQRKFEETGESNR 65 
                 44455555555554........777777888888889999999999999999999999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2334  (0.170714); expected 273.4 (0.02)
Passed bias filter:                     1342  (0.0981568); expected 273.4 (0.02)
Passed Vit filter:                       202  (0.0147747); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.50u 0.51s 00:00:01.01 Elapsed: 00:00:00.56
# Mc/sec: 342.34
//
Query:       MMETSP1325-20131115|4458_1  [L=371]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       591  (0.043227); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.39s 00:00:01.08 Elapsed: 00:00:00.73
# Mc/sec: 1217.87
//
Query:       MMETSP1325-20131115|4465_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 406.52
//
Query:       MMETSP1325-20131115|4466_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.37s 00:00:00.62 Elapsed: 00:00:00.49
# Mc/sec: 146.72
//
Query:       MMETSP1325-20131115|4464_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 1217.74
//
Query:       MMETSP1325-20131115|4468_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-24   83.8   9.8    1.2e-23   83.3   6.8    1.2  1  PF00335.15 Tetraspanin family
     0.0061   15.5   1.6       0.56    9.1   0.0    2.1  2  PF05884.7  Interactor of ZYG-11
  ------ inclusion threshold ------
      0.021   14.4   0.4      0.047   13.2   0.2    1.5  1  PF08592.6  Domain of unknown function (DUF1772)
      0.045   13.2   0.1       0.15   11.5   0.0    1.9  1  PF08510.7  PIG-P
       0.25   11.0   2.1        1.3    8.7   0.0    2.3  2  PF06724.6  Domain of Unknown Function (DUF1206)


Domain annotation for each model (and alignments):
>> PF00335.15  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   6.8   4.5e-27   1.2e-23       2     220 ..      35     277 ..      34     278 .. 0.80

  Alignments for each domain:
  == domain 1    score: 83.3 bits;  conditional E-value: 4.5e-27
  PF00335.15   2 lkyllfllnllfllvGlallgvgvwlkvsldllaeasnssksavilliiviGviililgilGcigal........keskcllliyailllllflaelalailafvlrsqleaslksgl................vqykdksdskrdylkealdllqekleCCGvtgpsdwaqsqwiskrsldm...............asacsnadnsnsnlnlytegCkealqeflkenlkiigivalgiaviellgvilacl.lcrs 220
                 lk+++f+ n +++lvG+al+g+ ++     d +a  + ++ +++ +++i++G++ili+ ++Gc+ga+        ++ + ll +y ++ll l+ +++  ++ ++ + ++l++  ++ l                +            l++ ++++  +   +G  + + w  +  ++++s+ m               +++ +nad++n+  n + + C+ a    + ++   ig  ++ ++++e  ++il+c+ +c++
  MMETSP1325-20131115|4468_1  35 LKFTFFVVNSMYCLVGVALIGLSIYC--LTDAWADLDPDIYRSAATILISTGAVILIIVMCGCFGAVyqeqrtgsCRGRRLLSFYQLCLLTLIGLQFYTTVYMLNTAESLQTVKDE-LasarsnetvayvdaeeS------------LSNKFNDYYFDTV-TGSQDGYFWDFIDGNCPQSSGMgsddcnvetyastcpDEDACNADDDNAMENCPYDMCRRAAVTRFLGIVEPIGDYGIFVCIFETALMILTCClICFN 277
                 8************************9..5677777778899999*************************************************************99999976554.447775333333333331............3333333333333.34444444444444444444447777777777777779*******************************************************77766 PP

>> PF05884.7  Interactor of ZYG-11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0002      0.56     238     271 ..      31      64 ..      24      73 .. 0.89
   2 !    5.4   0.3    0.0027       7.3     134     183 ..      79     127 ..      75     138 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0002
   PF05884.7 238 vegaltgsylvlsalYtlaalaliQiAfrdqtda 271
                 ++g l+++++v+  +Y l  +ali +   ++tda
  MMETSP1325-20131115|4468_1  31 LNGLLKFTFFVVNSMYCLVGVALIGLSIYCLTDA 64 
                 57889********************999999886 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0027
   PF05884.7 134 iilrvGAailatlVlPliaaYylnaevgslaekRlalvilalvQgvLiGa 183
                 i+   GA+il+ +      a y +++ gs  + Rl l    l    LiG 
  MMETSP1325-20131115|4468_1  79 ILISTGAVILIIVMCGCFGAVYQEQRTGSCRGRRL-LSFYQLCLLTLIGL 127
                 56679******9999999999**************.55555555556665 PP

>> PF08592.6  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   1.7e-05     0.047      35     114 ..      83     161 ..      37     164 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.7e-05
   PF08592.6  35 afmpvlalltalafaylav.......aalsgsrg.paarll..laaaaalllgivpvTllanvPtNnkLaaadvakkkeaaaadwveell 114
                 + ++ l+++         +       ++ ++  + +++rll  + +++++l+g++ +T + ++ t ++L++++  ++ ++a + ++ +++
  MMETSP1325-20131115|4468_1  83 TGAVILIIV---------McgcfgavYQEQRTGScRGRRLLsfYQLCLLTLIGLQFYTTVYMLNTAESLQTVK--DELASARSNETVAYV 161
                 222222222.........2344554444444444355555511556778899*****************9999..788888887778776 PP

>> PF08510.7  PIG-P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   5.5e-05      0.15      56     100 ..     119     164 ..     113     201 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5.5e-05
   PF08510.7  56 lllfaylvlallnl.vltppldsletitDekarvakedeeedfeke 100
                 l+l ++++l+++++ ++ +  +sl+t+ De a+ + +++ +  ++e
  MMETSP1325-20131115|4468_1 119 LCLLTLIGLQFYTTvYMLNTAESLQTVKDELASARSNETVAYVDAE 164
                 799***********9***************9999988877665554 PP

>> PF06724.6  Domain of Unknown Function (DUF1206)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00047       1.3      50      71 ..      46      67 ..      43      69 .. 0.90
   2 ?    0.9   0.5      0.13   3.5e+02      45      60 ..      83      98 ..      75     101 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00047
   PF06724.6 50 lgavglgllayglyrlvkaitr 71
                  +vg++l+++ +y+l  a+ +
  MMETSP1325-20131115|4468_1 46 YCLVGVALIGLSIYCLTDAWAD 67
                679*****************86 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.13
   PF06724.6 45 fGrvllgavglgllay 60
                 G v+l++v  g++++
  MMETSP1325-20131115|4468_1 83 TGAVILIIVMCGCFGA 98
                4999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       606  (0.0443242); expected 273.4 (0.02)
Passed bias filter:                      382  (0.0279403); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.34s 00:00:00.99 Elapsed: 00:00:00.49
# Mc/sec: 1476.94
//
Query:       MMETSP1325-20131115|4470_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 723.61
//
Query:       MMETSP1325-20131115|4469_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-35  121.9   0.0    2.5e-35  121.7   0.0    1.1  1  PF01987.12 Mitochondrial biogenesis AIM24


Domain annotation for each model (and alignments):
>> PF01987.12  Mitochondrial biogenesis AIM24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.7   0.0   1.8e-39   2.5e-35       1     215 []      14     218 ..      14     218 .. 0.96

  Alignments for each domain:
  == domain 1    score: 121.7 bits;  conditional E-value: 1.8e-39
                 EEE-SS-SS--EEEE------EEEE---EEEE-TTEEEE-TT----.--------TTT----TTEEEEEE.-----EEE--S----EEEE-----..-EEEE---EEEE----EEEEEE-.------------EEEEEE----EEEE----EEEE---.---EEEEGGGEEEEETTSEEEEE----....-TTT-------EE.EEE----EEEES-- CS
  PF01987.12   1 yeielgdnasllevtLkpgeevyaeaGamvamsgkvefetklstgglggllkalkralggeslfqteftaatgpgevllapsspgdisvleLdgg.eallvqkgaflaaspgvqldlsfa.glgkglfggeglfltkltGrGlvalssyGaivelelaegeelvvdpghvvAwsgtlnyevekvkgslsglksalfsGeglfl.eftGpGkVllqsre 215
                 yei+ gd+++++  +++p++ ++ e+G+m+ ms +++ e         ++     r+ gge     ++t++  +g v + p++p +i++++Ld+  +++ +qkga++ ++++v+ + s+    ++   +g g   +kl+G+G ++l++ G+++++ela ge lvvd++ +vAw++++   v+   g   g   a ++Geg  + ++tGpG V++qs++
  MMETSP1325-20131115|4469_1  14 YEIL-GDDMQVITLEMQPDQVMISEPGTMLTMSKDIKTEV--------VWDDCCARMCGGEPPMNVKYTNEGEKGFVGFTPNMPAKIIPMNLDQYpNGMNAQKGAYMSSQGQVKAGFSLDcCSATCCCSGMGCCRQKLEGDGVAFLNATGTVIKKELASGEMLVVDTESLVAWDAGVGLGVQAT-G---GCCVACLGGEGCCNtTVTGPGDVWIQSMN 218
                 6887.9**********************************........4999*********999999999999***********************************************866678999**************************************************99998.5...6999999******99************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 1165.29
//
Query:       MMETSP1325-20131115|4471_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.65
# Mc/sec: 210.14
//
Query:       MMETSP1325-20131115|4463_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.57
# Mc/sec: 185.92
//
Query:       MMETSP1325-20131115|4475_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.2   11.2   0.7        0.4   10.2   0.5    1.5  1  PF05456.6 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP)


Domain annotation for each model (and alignments):
>> PF05456.6  Eukaryotic translation initiation factor 4E binding protein (EIF4EBP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.5     3e-05       0.4      28      46 ..      39      57 ..      15      59 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 3e-05
   PF05456.6 28 edysttpGGtlysttPGGt 46
                ++y+ t GG+lys  P Gt
  MMETSP1325-20131115|4475_1 39 NNYAFTVGGALYSSNPTGT 57
                78****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1000.22
//
Query:       MMETSP1325-20131115|4477_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|4476_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.054   13.5   0.0       0.18   11.8   0.0    1.8  2  PF02659.10 Domain of unknown function DUF


Domain annotation for each model (and alignments):
>> PF02659.10  Domain of unknown function DUF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.33   4.5e+03      43      63 ..       3      24 ..       2      26 .. 0.77
   2 ?   11.8   0.0   1.3e-05      0.18      32      66 ..      42      77 ..      34      77 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.33
  PF02659.10 43 lGsalgk.llgryaeiiGgilL 63
                +G++++  ++   ++++++ +L
  MMETSP1325-20131115|4476_1  3 AGRMIQVdYFDDDDPLFAFSVL 24
                6888885588888999999888 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 1.3e-05
  PF02659.10 32 fqalmpliGyllGsalgk.llgryaeiiGgilLili 66
                +++ m+++ y++G++++  ++   ++++G++lL+++
  MMETSP1325-20131115|4476_1 42 MATHMITLCYFAGRMIQVdYFDDDDPLVGCLLLLFV 77
                667899***********66**************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       526  (0.0384728); expected 273.4 (0.02)
Passed bias filter:                      467  (0.0341574); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 1033.10
//
Query:       MMETSP1325-20131115|4478_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|4481_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0001   21.2   0.0    0.00012   21.0   0.0    1.1  1  PF06814.8 Lung seven transmembrane receptor


Domain annotation for each model (and alignments):
>> PF06814.8  Lung seven transmembrane receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   8.5e-09   0.00012       1      39 [.      23      58 ..      23      59 .] 0.90

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 8.5e-09
   PF06814.8  1 ikktGlYslifskcdeelsksksslklkvkvnwknpeGy 39
                + ktGlY+l  ++cd+e+    + + ++++++w+np+G+
  MMETSP1325-20131115|4481_1 23 VRKTGLYTLLLANCDNEN---PADIMVTGQTVWMNPYGF 58
                579************997...677889**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 252.47
//
Query:       MMETSP1325-20131115|4484_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-30  101.6   6.4    8.8e-07   28.3   0.1    4.0  4  PF00023.25 Ankyrin repeat
    3.8e-28   97.5   5.8    9.6e-18   64.1   0.4    2.0  2  PF12796.2  Ankyrin repeats (3 copies)
    1.1e-23   83.0   5.2    2.6e-11   43.6   0.1    2.6  3  PF13637.1  Ankyrin repeats (many copies)
    3.6e-23   80.9   5.7    1.9e-10   40.4   0.3    3.9  4  PF13857.1  Ankyrin repeats (many copies)
    2.2e-17   61.3   1.2    0.00038   20.3   0.0    4.1  4  PF13606.1  Ankyrin repeat
     0.0081   15.8   1.5        1.3    8.7   0.2    2.1  2  PF04486.7  SchA/CurD like domain


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.1   3.9e-10   8.8e-07       2      32 ..       3      33 ..       2      34 .. 0.95
   2 !   24.7   0.1   5.4e-09   1.2e-05       1      33 []      35      67 ..      35      67 .. 0.95
   3 !   27.5   0.0   6.9e-10   1.6e-06       2      32 ..      69      99 ..      68     100 .. 0.95
   4 !   22.8   0.1   2.1e-08   4.8e-05       1      26 [.     101     126 ..     101     129 .] 0.92

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 3.9e-10
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                G T+L +Aa++g++ +v+ Ll +GAd+++ +
  MMETSP1325-20131115|4484_1  3 GVTALAVAAHKGRAHMVRELLAAGADVDIPN 33
                89**************************987 PP

  == domain 2    score: 24.7 bits;  conditional E-value: 5.4e-09
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                +G T+L  A++ g++++v++L+ + A ++  +d
  MMETSP1325-20131115|4484_1 35 NGSTALIQASHFGHADIVTDLIHARAQVDRPND 67
                79**************************98876 PP

  == domain 3    score: 27.5 bits;  conditional E-value: 6.9e-10
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                G T+L+ Aa+ g+l+vv  Ll+  +d+n ++
  MMETSP1325-20131115|4484_1 69 GTTALMRAAQEGHLNVVARLLKEQCDVNRRN 99
                89**************************998 PP

  == domain 4    score: 22.8 bits;  conditional E-value: 2.1e-08
                 TSCBHHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGA 26 
                 dG+ +L+l ++rg++e+v+lL++ +A
  MMETSP1325-20131115|4484_1 101 DGMNALMLGSQRGHAEIVSLLIDDNA 126
                 8*********************9666 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.4   2.9e-14   6.6e-11      28      87 ..       5      64 ..       2      66 .. 0.95
   2 !   64.1   0.4   4.2e-21   9.6e-18       4      83 ..      43     126 ..      42     129 .] 0.95

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 2.9e-14
   PF12796.2 28 tpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87
                t+L +Aa +g+  +v+ Ll+agadv+  +++g t+L+ A  +gh+++v  L+++ a v++
  MMETSP1325-20131115|4484_1  5 TALAVAAHKGRAHMVRELLAAGADVDIPNHNGSTALIQASHFGHADIVTDLIHARAQVDR 64
                89***************************************************9999875 PP

  == domain 2    score: 64.1 bits;  conditional E-value: 4.2e-21
   PF12796.2   4 AaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83 
                 A   g++++v  L+++ a vd+    g t+L+ Aa+ g+l++v  Ll+ ++dvn ++++g+++L+l  + gh+e+v lL++  a
  MMETSP1325-20131115|4484_1  43 ASHFGHADIVTDLIHARAQVDRpndkGTTALMRAAQEGHLNVVARLLKEQCDVNRRNEDGMNALMLGSQRGHAEIVSLLIDDNA 126
                 7889*******************999999***************************************************9876 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.1   2.4e-11   5.4e-08       1      54 []       3      56 ..       3      56 .. 0.96
   2 !   19.6   0.1   3.8e-07   0.00086      22      54 .]      57      89 ..      54      89 .. 0.89
   3 !   43.6   0.1   1.1e-14   2.6e-11       1      54 []      69     122 ..      69     122 .. 0.98

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 2.4e-11
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                g+taL +aa++gr  +v+ Ll+ g+d++  + +G taL+ A  +g+ +i+  L+
  MMETSP1325-20131115|4484_1  3 GVTALAVAAHKGRAHMVRELLAAGADVDIPNHNGSTALIQASHFGHADIVTDLI 56
                5799*********************************************98876 PP

  == domain 2    score: 19.6 bits;  conditional E-value: 3.8e-07
   PF13637.1 22 ekgidinrtdesGntaLhiAalrgnieilklLl 54
                  +++++r +++G+taL +Aa+ g+++++  Ll
  MMETSP1325-20131115|4484_1 57 HARAQVDRPNDKGTTALMRAAQEGHLNVVARLL 89
                458999**********************99886 PP

  == domain 3    score: 43.6 bits;  conditional E-value: 1.1e-14
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 g+taL++aa+ g+l +v+ Ll+   d+nr++e+G++aL +  +rg+ ei+ lL+
  MMETSP1325-20131115|4484_1  69 GTTALMRAAQEGHLNVVARLLKEQCDVNRRNEDGMNALMLGSQRGHAEIVSLLI 122
                 589*******************9*****************************98 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.2     8e-12   1.8e-08      15      55 ..       2      42 ..       1      43 [. 0.95
   2 !   16.9   0.1   2.1e-06    0.0048       5      40 ..      26      60 ..      25      64 .. 0.85
   3 !   40.4   0.3   8.5e-14   1.9e-10       3      54 ..      57     107 ..      55     108 .. 0.92
   4 !    9.1   0.0   0.00063       1.4      16      41 ..     102     127 ..     101     129 .] 0.89

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 8e-12
   PF13857.1 15 ggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldl 55
                +g+t+L +Aa++g++++vr+Lla+gad ++ + +g tal  
  MMETSP1325-20131115|4484_1  2 KGVTALAVAAHKGRAHMVRELLAAGADVDIPNHNGSTALIQ 42
                699***********************************975 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 2.1e-06
   PF13857.1  5 gpadvnatdeggntpLhlAakggalevvrlLlapga 40
                g adv+  + +g+t+L +A + g++++v  L++++a
  MMETSP1325-20131115|4484_1 26 G-ADVDIPNHNGSTALIQASHFGHADIVTDLIHARA 60
                5.789999999*****************99995544 PP

  == domain 3    score: 40.4 bits;  conditional E-value: 8.5e-14
   PF13857.1   3 ehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltald 54 
                  ++ a+v++ + +g+t+L+ Aa  g+l+vv  Ll+ ++d n r++dg +al 
  MMETSP1325-20131115|4484_1  57 HAR-AQVDRPNDKGTTALMRAAQEGHLNVVARLLKEQCDVNRRNEDGMNALM 107
                 555.8999*****************************************995 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.00063
   PF13857.1  16 gntpLhlAakggalevvrlLlapgad 41 
                 g+++L+l   +g++e+v lL++ +a+
  MMETSP1325-20131115|4484_1 102 GMNALMLGSQRGHAEIVSLLIDDNAA 127
                 899******************77765 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.7e-07   0.00038       2      29 ..       3      30 ..       2      31 .. 0.94
   2 !    8.4   0.0    0.0012       2.6       1      28 [.      35      62 ..      35      64 .. 0.91
   3 !   18.2   0.0   7.6e-07    0.0017       2      29 ..      69      96 ..      68      97 .. 0.96
   4 !   10.9   0.0   0.00018      0.41       1      27 [.     101     127 ..     101     129 .] 0.90

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.7e-07
   PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                G T+L +Aa++gr  +v++Ll +gad++
  MMETSP1325-20131115|4484_1  3 GVTALAVAAHKGRAHMVRELLAAGADVD 30
                78************************98 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0012
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadi 28
                nG T+L  A ++g+ ++v  L+ ++a++
  MMETSP1325-20131115|4484_1 35 NGSTALIQASHFGHADIVTDLIHARAQV 62
                799***************9999998877 PP

  == domain 3    score: 18.2 bits;  conditional E-value: 7.6e-07
   PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                G T+L+ Aa+ g++++v  Ll+  +d+n
  MMETSP1325-20131115|4484_1 69 GTTALMRAAQEGHLNVVARLLKEQCDVN 96
                88************************99 PP

  == domain 4    score: 10.9 bits;  conditional E-value: 0.00018
   PF13606.1   1 nGnTpLhlAasngrielveaLlengad 27 
                 +G ++L+l  ++g+ e+v++L++  a 
  MMETSP1325-20131115|4484_1 101 DGMNALMLGSQRGHAEIVSLLIDDNAA 127
                 6999******************98775 PP

>> PF04486.7  SchA/CurD like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.2   0.00059       1.3       4      57 ..       5      59 ..       3      64 .. 0.86
   2 !    6.5   0.0    0.0027       6.2      56      97 ..      78     121 ..      71     128 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00059
   PF04486.7  4 hAltYpvkpGseeevaella.sreseaaagdpagrllrttlFlrddvvVRvveve 57
                 Al   ++ G+ ++v ella   ++   +++ ++ l+ ++ F + d+v  +++ +
  MMETSP1325-20131115|4484_1  5 TALAVAAHKGRAHMVRELLAaGADVDIPNHNGSTALIQASHFGHADIVTDLIHAR 59
                58888999************5566677889999***************9999987 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0027
   PF04486.7  56 veGdlaavlrhvaeqpevrevee..alapyLeeprdladlesll 97 
                  eG+l+ v+r + eq+ v+ ++e  + a++L  +r +a+  sll
  MMETSP1325-20131115|4484_1  78 QEGHLNVVARLLKEQCDVNRRNEdgMNALMLGSQRGHAEIVSLL 121
                 48999999999999999965433115567888888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 672.02
//
Query:       MMETSP1325-20131115|4487_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|4486_1  [L=449]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.4    6.7   7.6        2.2    6.1   5.3    1.2  1  PF09586.5 Bacterial membrane protein YfhO


Domain annotation for each model (and alignments):
>> PF09586.5  Bacterial membrane protein YfhO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.3   0.00016       2.2     276     390 ..     225     336 ..     211     348 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00016
   PF09586.5 276 gslpniyvgllvllllllyfvlkkiklkekllfalillflilsfllpplnlvwhgfqapqgfpyRfsfllsflilllaaealdelkelkklkilllllllvlllllilllknkks 390
                 +s+ ++ ++   ll+++++f++ +  + ++++f+ i++++i s   p++n + + f+          +l+++++lll  ++ + ++++    +l+l+ ++++++++++   +k++
  MMETSP1325-20131115|4486_1 225 WSMEVYAMMRRLLLTCAVLFCRTLAETTVFVVFVAIVTLVIESETKPYINPFINAFTHVC---CWQILLFVLYLLLLDSQMTSGRQAIVISALLMLANVVMAIFIFFADTTLKDQ 336
                 555555566667899999***************************************999...8899999999999999999999999544444455555555555544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       655  (0.0479081); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.36s 00:00:01.19 Elapsed: 00:00:00.67
# Mc/sec: 1605.92
//
Query:       MMETSP1325-20131115|4488_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.0   0.3      0.026   14.3   0.2    1.5  1  PF05377.6 Flagella accessory protein C (FlaC)


Domain annotation for each model (and alignments):
>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   1.9e-06     0.026       1      36 [.     128     163 ..     128     182 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.9e-06
   PF05377.6   1 kideLEnklsklstvvatvrkeleelsksvekiken 36 
                 +i e E+  +k+++v+a  r+e+  l+ +ve +k++
  MMETSP1325-20131115|4488_1 128 RIAESEQASNKIEAVLADRRAEVAALRLEVEGLKKE 163
                 79999****************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       476  (0.0348157); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 982.51
//
Query:       MMETSP1325-20131115|4489_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|4490_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   11.8  14.2       0.03   11.5   9.8    1.1  1  PF12128.3  Protein of unknown function (DUF3584)
      0.029   12.7   2.1      0.045   12.1   1.4    1.3  1  PF02994.9  L1 transposable element
      0.056   11.4   2.4      0.062   11.3   1.6    1.0  1  PF01763.11 Herpesvirus UL6 like
      0.067   13.2   0.4       0.16   11.9   0.2    1.8  2  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
      0.096   12.4   3.8       0.12   12.1   2.4    1.4  1  PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
       0.13   12.5   2.3       0.17   12.1   1.4    1.4  1  PF06156.8  Protein of unknown function (DUF972)
       0.13   11.7  11.5       0.87    9.0   0.8    2.1  2  PF04156.9  IncA protein
       0.33    9.7  10.0       0.39    9.5   6.9    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.39   10.0   7.1       0.63    9.4   1.7    2.6  3  PF04977.10 Septum formation initiator
        0.4   10.4  10.0      0.092   12.5   2.0    3.0  3  PF08826.5  DMPK coiled coil domain like
       0.95    9.2  10.6       0.93    9.2   1.9    3.4  4  PF12329.3  TATA element modulatory factor 1 DNA binding
       0.98    8.8   4.5        2.3    7.6   2.8    1.8  1  PF05266.9  Protein of unknown function (DUF724)
        1.6    8.2   6.7        4.6    6.7   4.6    1.7  1  PF03962.10 Mnd1 family
        1.9    8.2  10.3          5    6.8   3.9    2.0  2  PF11559.3  Afadin- and alpha -actinin-Binding
        2.2    8.5   8.8        4.6    7.4   5.8    1.8  1  PF13935.1  Ead/Ea22-like protein
        2.7    7.3   6.3        5.8    6.2   4.4    1.8  1  PF06810.6  Phage minor structural protein GP20
        3.3    5.6   6.8        3.7    5.4   4.7    1.1  1  PF11336.3  Protein of unknown function (DUF3138)
        4.2    6.3   7.4        5.4    5.9   4.4    1.7  1  PF06251.6  Capsule biosynthesis GfcC
        4.6    7.1   8.7        1.2    9.1   2.0    2.0  2  PF11068.3  Protein of unknown function (DUF2869)
        8.1    6.3  12.8        1.1    9.2   5.0    1.9  2  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit


Domain annotation for each model (and alignments):
>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   9.8   4.5e-05      0.03     630     749 ..       7     126 ..       2     130 .] 0.74

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 4.5e-05
   PF12128.3 630 lkqlnaeleeakravaeakqalkqarlelqrlkneqqslkdklekalaerkqqaeeqlqkldaelkqleekkkaaleelkddlreerlekkakwqevegeldeqlaqlkaaieaartqak 749
                 l++l++  ++a ra     q+l    +el   +  q  + +  +++  er ++   q+ +l+++l++l++  +a ++el+d +r e+   +a+++ v + +++ +++l +a+++a+++ +
  MMETSP1325-20131115|4490_1   7 LQELRERGQAALRASDAEVQQLVVCLEELDTRSRRQIDALRDANRVAMERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALAQANVASVAAVREKGETALRQALAQANVASA 126
                 44444444443333333333333333344433444444445567788899999***********************************************************99987765 PP

>> PF02994.9  L1 transposable element
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.4   6.5e-05     0.045      65     139 ..      19      96 ..       4     113 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.5e-05
                 XXXXXXXXX...XXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXX..................... CS
   PF02994.9  65 eakakevqk...vlkelkeiitkqvevlieeeekslkelmelkkklkelkeeveaikkeqseatldietlkkksgvvd 139
                 +a   evq+    l el+    +q+++l++ ++ ++ +  el  ++ +l+e++ a+kk ++ +  ++ + k+++ ++ 
  MMETSP1325-20131115|4490_1  19 RASDAEVQQlvvCLEELDTRSRRQIDALRDANRVAMERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALA 96 
                 23344555511156777777889************************************9999999999888876654 PP

>> PF01763.11  Herpesvirus UL6 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.6   9.1e-05     0.062     349     430 ..      11      96 ..       2     123 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 9.1e-05
  PF01763.11 349 ketveqalrks..vsnsvikcLeeqineqfdtiekLkeenedlekklkeleseLerlree....ekasasleaedaeletldtlealr 430
                 +e+ + alr+s   +++++ cLee       +i+ L+++n+  +++++el +++ +l+e+    +ka+a++eae a+ +  +  +al 
  MMETSP1325-20131115|4490_1  11 RERGQAALRASdaEVQQLVVCLEELDTRSRRQIDALRDANRVAMERNRELGDQVVQLHEQlgalKKANAASEAELADSKRRE--QALA 96 
                 55666666654225688999**************************************997765333333333322211111..2222 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.9   1.3e+03      72      90 ..      22      40 ..       5      44 .. 0.62
   2 ?   11.9   0.2   0.00024      0.16      19      65 ..      39      85 ..      23      97 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 1.9
   PF10046.4 72 eeqvtkLeeavkeLDeysk 90
                +++v++L    +eLD  s 
  MMETSP1325-20131115|4490_1 22 DAEVQQLVVCLEELDTRSR 40
                4566666666666666655 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00024
   PF10046.4 19 saedlklLeklNeataekykeleqkakslekeleklkqkyeelkpyl 65
                s  +++ L   N++++e+  el++ + +l+++l +lk+ +   + +l
  MMETSP1325-20131115|4490_1 39 SRRQIDALRDANRVAMERNRELGDQVVQLHEQLGALKKANAASEAEL 85
                5678899******************************9998877666 PP

>> PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.4   0.00017      0.12      54     119 ..      20      84 ..       4     103 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00017
   PF05852.6  54 kkekelkekvssleteieekkkelelLkkfdrkklerleaLtdrveelkeelefelerleaeegee 119
                  +++e++++v+ le   +++++++ +L+  +r  +er  +L d+v +l+e+l  +l++ +a++++e
  MMETSP1325-20131115|4490_1  20 ASDAEVQQLVVCLEELDTRSRRQIDALRDANRVAMERNRELGDQVVQLHEQLG-ALKKANAASEAE 84 
                 4678999999999999999*******************************995.466665443332 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.4   0.00025      0.17       6      73 ..      25      90 ..      20     114 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00025
   PF06156.8  6 lfdklseleeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkkekkkkkkklge 73
                + + +  lee  ++  +++++l++     +e+n el  ++ +l+e+l  l+++++++e++ + +  ++
  MMETSP1325-20131115|4490_1 25 VQQLVVCLEELDTRSRRQIDALRDANRVAMERNRELGDQVVQLHEQLGALKKANAASEAELADS--KR 90
                555666677777778899******************************9988433333332222..22 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.4    0.0025       1.7     146     187 ..       7      52 ..       3      56 .. 0.85
   2 ?    9.0   0.8    0.0013      0.87      85     122 ..      59      96 ..      53     122 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0025
   PF04156.9 146 irelr....eeisdlkeevqelrselerlqedlqrlqeklaelqrl 187
                 ++elr    ++++ +++evq+l+ +le+l+++++r+  +l + +r+
  MMETSP1325-20131115|4490_1   7 LQELRergqAALRASDAEVQQLVVCLEELDTRSRRQIDALRDANRV 52 
                 556666667999*************************999998876 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0013
   PF04156.9  85 esesqlseleeeleqleerlaeleseledleedlellq 122
                 e+ +q+ +l+e+l +l + +a++e+el d ++ ++ l 
  MMETSP1325-20131115|4490_1  59 ELGDQVVQLHEQLGALKKANAASEAELADSKRREQALA 96 
                 66789999*******************99999888877 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   6.9   0.00056      0.39      36     127 ..       7     112 ..       4     128 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00056
   PF10186.4  36 ketlkkkveealeeaene..............kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqee 127
                  ++l+++ ++al  +++e              +++++++l+ +     er++++ +++ ql e++ ++++  ++ +++la+ +++ +a aq      + ++++ e+
  MMETSP1325-20131115|4490_1   7 LQELRERGQAALRASDAEvqqlvvcleeldtrSRRQIDALRDANRVAMERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALAQANVASVAAVREKGET 112
                 45666666666665555566677777777777*************************************************9999885555555555555554443 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1      0.13        86      14      41 ..      13      40 ..      10      61 .. 0.63
   2 ?    6.6   0.2    0.0066       4.5      23      52 ..      40      69 ..      38      76 .. 0.88
   3 ?    9.4   1.7   0.00092      0.63      20      57 ..      58      95 ..      54     100 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.13
  PF04977.10 14 sgllalyqlkqeiaalqaelaklkaene 41
                +g+ al++ ++e+++l   l++l  + +
  MMETSP1325-20131115|4490_1 13 RGQAALRASDAEVQQLVVCLEELDTRSR 40
                6677777777777777777777666543 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0066
  PF04977.10 23 kqeiaalqaelaklkaeneeLeaevkdLks 52
                +++i+al + +    ++n+eL ++v +L+ 
  MMETSP1325-20131115|4490_1 40 RRQIDALRDANRVAMERNRELGDQVVQLHE 69
                79*************************964 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.00092
  PF04977.10 20 yqlkqeiaalqaelaklkaeneeLeaevkdLksdedyi 57
                ++l  ++++l ++l +lk+ n++ eae++d k  e ++
  MMETSP1325-20131115|4490_1 58 RELGDQVVQLHEQLGALKKANAASEAELADSKRREQAL 95
                57778*************************97555544 PP

>> PF08826.5  DMPK coiled coil domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.2       0.9   6.2e+02      45      57 ..      22      34 ..       3      41 .. 0.59
   2 ?    5.8   0.5     0.017        11      39      55 ..      55      71 ..      15      74 .. 0.85
   3 ?   12.5   2.0   0.00013     0.092      16      46 ..      67      97 ..      63     117 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.9
   PF08826.5 45 eeeleqLkkemEe 57
                 +e++qL   +Ee
  MMETSP1325-20131115|4490_1 22 DAEVQQLVVCLEE 34
                3566666555555 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.017
   PF08826.5 39 kknreLeeeleqLkkem 55
                 +nreL +++ qL++++
  MMETSP1325-20131115|4490_1 55 ERNRELGDQVVQLHEQL 71
                69***********9987 PP

  == domain 3    score: 12.5 bits;  conditional E-value: 0.00013
   PF08826.5 16 lqeeLekvkaanlafeskLkeaEkknreLee 46
                l+e+L + k+an a e  L ++  + ++L +
  MMETSP1325-20131115|4490_1 67 LHEQLGALKKANAASEAELADSKRREQALAQ 97
                89***************************75 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2      0.32   2.2e+02       6      16 ..      17      27 ..       4      42 .. 0.54
   2 ?    6.5   0.2    0.0092       6.3       7      66 ..      18      74 ..      14      75 .. 0.82
   3 ?    9.2   1.9    0.0014      0.93      21      60 ..      57      96 ..      40     102 .. 0.83
   4 ?    0.5   0.1      0.69   4.7e+02      13      33 ..     102     122 ..      93     124 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.32
   PF12329.3  6 klkeKdeqIaq 16
                 l++ d++++q
  MMETSP1325-20131115|4490_1 17 ALRASDAEVQQ 27
                23333444444 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0092
   PF12329.3  7 lkeKdeqIaqLmeEgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleel 66
                l++ d++++qL      L+  + + + +i+ Lr  n+ + +  +el +++ +l ++l  l
  MMETSP1325-20131115|4490_1 18 LRASDAEVQQLVV---CLEELDTRSRRQIDALRDANRVAMERNRELGDQVVQLHEQLGAL 74
                7788888888884...455557789999***********999999999999999988877 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.0014
   PF12329.3 21 gekLskkelkhnntikkLrkknkelekeieelkkklekle 60
                  +L ++  ++ +++  L+k n+++e+e+++ k++ + l 
  MMETSP1325-20131115|4490_1 57 NRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALA 96
                5678899999999999999999999999999997766554 PP

  == domain 4    score: 0.5 bits;  conditional E-value: 0.69
   PF12329.3  13 qIaqLmeEgekLskkelkhnn 33 
                  +a+ +e+ge    + l++ n
  MMETSP1325-20131115|4490_1 102 SVAAVREKGETALRQALAQAN 122
                 578999999998888888765 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.8    0.0033       2.3     130     175 ..      54      99 ..       7     109 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0033
   PF05266.9 130 eseiaelerkilelrrkeallkekkeaedkeiarlkseasklkqel 175
                  +  +el  ++++l ++  +lk++++a+++e+a +k  +++l q+ 
  MMETSP1325-20131115|4490_1  54 MERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALAQAN 99 
                 33456888999999999999*****************999998874 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   4.6    0.0067       4.6      76     145 ..      16      99 ..       3     126 .. 0.44

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0067
  PF03962.10  76 keleelkqrikelqaeiekekkkreet...........ee.reelleelkeleeelkklkkele..klakldpekveklkeete 145
                 + l  +++++++l   +e+  ++ + +            e  +el +++ +l e+l +lkk  +  +++  d+++ e+  ++ +
  MMETSP1325-20131115|4490_1  16 AALRASDAEVQQLVVCLEELDTRSRRQidalrdanrvaMErNRELGDQVVQLHEQLGALKKANAasEAELADSKRREQALAQAN 99 
                 333333333333333333332221111223432222222202234444444444444444443333444444444444444444 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   1.1     0.018        12      52     111 ..       9      65 ..       4      71 .. 0.60
   2 ?    6.8   3.9    0.0073         5      58     124 ..      54     120 ..      42     128 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.018
   PF11559.3  52 eqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklk 111
                 e re  ++ lr ++ae ++l  ++e l t++ +   ++++l  + r +  ++++l  ++ 
  MMETSP1325-20131115|4490_1   9 ELRERGQAALRASDAEVQQLVVCLEELDTRSRR---QIDALRDANRVAMERNRELGDQVV 65 
                 557777788999999999999999999987654...444444444444444444333333 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0073
   PF11559.3  58 eetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlknii 124
                  e++r+l     +l+ ++  lk+ ++++e ela ++++e++l + +    ++++++ e + r+  + 
  MMETSP1325-20131115|4490_1  54 MERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALAQANVASVAAVREKGETALRQALAQ 120
                 5677788888889999999999999999999999999999998888888888877777777765554 PP

>> PF13935.1  Ead/Ea22-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.8    0.0068       4.6      68     130 ..      30      95 ..       3     113 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0068
   PF13935.1  68 tvlaLLDelekkqqrikaldev.....qenedialtvgklrveLeaaekrlekenveqaeaaegvita 130
                 + l+ LD + ++q  i+al+++       n ++ + v +l ++L a +k +++ ++e a+++ ++ + 
  MMETSP1325-20131115|4490_1  30 VCLEELDTRSRRQ--IDALRDAnrvamERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQAL 95 
                 4456666666444..45555555999999*********************988888888877766554 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   4.4    0.0085       5.8      14      98 ..      42     125 ..       4     130 .] 0.57

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0085
   PF06810.6  14 diqeeKskldkaeeeldslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkkeeyeaklkdlklnnaielalkkakakn 98 
                 +i++ ++    a e + +l  q+ +  +q+  Lkk ++ +e   +  +  +++ + + + +      +k ++a+ +al++a++  
  MMETSP1325-20131115|4490_1  42 QIDALRDANRVAMERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALA-QANVASVAAVREKGETALRQALAQANVAS 125
                 3444444444445555566666666666666666643333322222333344444.22233333344555666666666666655 PP

>> PF11336.3  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   4.7    0.0054       3.7      23      96 ..      53     122 ..      28     128 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0054
   PF11336.3  23 kaeqikalqaqlaalqqqvkelraalaakpaaagggakiqsaaaaaaaapaadaaaalteddvtelkeqvanae 96 
                   e+ + l  q+ +l +q+ +l++a aa +a  + + + +    a a a ++ + aa+ e   t l++ +a a+
  MMETSP1325-20131115|4490_1  53 AMERNRELGDQVVQLHEQLGALKKANAASEAELADSKRRE---QALAQA-NVASVAAVREKGETALRQALAQAN 122
                 456778999****************999888764422222...222222.245677888888899999888765 PP

>> PF06251.6  Capsule biosynthesis GfcC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.4     0.008       5.4      60     121 ..       4      64 ..       1     117 [. 0.81

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.008
   PF06251.6  60 qavlaqLaelessadsdqaaaiaqLrqqLealklagRifvnlDpDlvRiaeesNpplngeyl 121
                 ++ l++L e +++a  +  a+++qL   Le+l +  R ++    D++R+a e N+ l    +
  MMETSP1325-20131115|4490_1   4 EEALQELRERGQAALRASDAEVQQLVVCLEELDTRSRRQIDALRDANRVAMERNRELGD-QV 64 
                 5679999999999************************999999*************943.34 PP

>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.0    0.0017       1.2      19      94 ..       8      82 ..       3      87 .. 0.77
   2 ?    6.0   2.1     0.015       9.9      22      85 ..      57     120 ..      50     126 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0017
   PF11068.3 19 eelqeelqeqleqleqelqqLefqkkkalkeikkqsaqqieeiqqqvekekakreeqkkqllqqleqvqeLelgse 94
                +el+e  q++l++ ++e+qqL      + +  ++q + +++++++   +   ++ +q  ql +ql ++++ +  se
  MMETSP1325-20131115|4490_1  8 QELRERGQAALRASDAEVQQLVVCLEELDTRSRRQ-IDALRDANRVAMERNRELGDQVVQLHEQLGALKKANAASE 82
                788888999**************999999997755.3666666666666667788888888888888877766665 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.015
   PF11068.3  22 qeelqeqleqleqelqqLefqkkkalkeikkqsaqqieeiqqqvekekakreeqkkqllqqleq 85 
                 ++el +q+ ql ++l  L++ +   ++e+  ++  +++ +q +v+   a re+    l+q l q
  MMETSP1325-20131115|4490_1  57 NRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALAQANVASVAAVREKGETALRQALAQ 120
                 6899999************999999999998887888888888888888888888888888777 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.2       0.9   6.1e+02     132     143 ..      16      27 ..       3      52 .. 0.39
   2 ?    9.2   5.0    0.0015       1.1      26      96 ..      54     125 ..      52     129 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.9
   PF13094.1 132 khleslqgnlaq 143
                   l +  ++ +q
  MMETSP1325-20131115|4490_1  16 AALRASDAEVQQ 27 
                 222222222222 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0015
   PF13094.1  26 lqekralerqlaaelksielLqeeirreeaelekdeekleeLek.nakalererkeesknlhpvlqelesev 96 
                  +++r+l  q+    +++ +L++  ++ eael++++++ + L + n+   +++r++ ++ l++ l++++  +
  MMETSP1325-20131115|4490_1  54 MERNRELGDQVVQLHEQLGALKKANAASEAELADSKRREQALAQaNVASVAAVREKGETALRQALAQANVAS 125
                 689***************************************753788888888888888899999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1261  (0.0922323); expected 273.4 (0.02)
Passed bias filter:                      612  (0.044763); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.65u 0.43s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|4492_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 644.02
//
Query:       MMETSP1325-20131115|4495_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1172.69
//
Query:       MMETSP1325-20131115|4498_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 390.71
//
Query:       MMETSP1325-20131115|4496_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|4503_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 536.96
//
Query:       MMETSP1325-20131115|4505_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 243.99
//
Query:       MMETSP1325-20131115|4507_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-10   41.5   0.3    7.2e-07   29.1   0.1    1.7  2  PF13499.1  EF-hand domain pair
    1.4e-10   39.8   0.1    5.1e-05   22.3   0.0    2.3  2  PF13202.1  EF hand
    2.6e-08   32.4   0.0     0.0014   17.6   0.0    2.2  2  PF00036.27 EF hand
    6.1e-08   31.7   0.0     0.0025   17.4   0.0    2.2  2  PF13405.1  EF-hand domain
    6.4e-07   28.7   0.1      0.015   14.7   0.0    2.1  2  PF13833.1  EF-hand domain pair
     0.0015   18.4   0.1     0.0095   15.8   0.0    1.9  1  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   3.9e-06    0.0089      44      62 ..      27      45 ..       4      49 .. 0.76
   2 !   29.1   0.1   3.1e-10   7.2e-07       5      58 ..      28      75 ..      22      77 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 3.9e-06
   PF13499.1 44 yifkelDkngdGvlsfeEf 62
                  fk lD n+dGvls++E 
  MMETSP1325-20131115|4507_1 27 STFKSLDANNDGVLSRDEV 45
                5588899999999999886 PP

  == domain 2    score: 29.1 bits;  conditional E-value: 3.1e-10
   PF13499.1  5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvls 58
                 Fk+lD ++dg l+++e  + + +++ +      + ++ ++f++lD+n+dGvl+
  MMETSP1325-20131115|4507_1 28 TFKSLDANNDGVLSRDEVIAGAWRFNMQ------PAEASALFDRLDTNKDGVLT 75
                4*********************999943......4455577***********98 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   2.3e-08   5.1e-05       3      20 ..      27      44 ..      23      47 .. 0.91
   2 !   15.7   0.0   2.7e-06    0.0061       3      17 ..      61      75 ..      59      77 .. 0.89

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 2.3e-08
                HHHHHH--S----B-HHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreE 20
                +tF+ +D+N+DG +sr+E
  MMETSP1325-20131115|4507_1 27 STFKSLDANNDGVLSRDE 44
                49***************9 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 2.7e-06
                HHHHHH--S----B- CS
   PF13202.1  3 dtFrafDlNgDGkIs 17
                ++F+++D+N+DG ++
  MMETSP1325-20131115|4507_1 61 ALFDRLDTNKDGVLT 75
                58**********998 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   6.1e-07    0.0014       5      25 ..      28      48 ..      24      52 .. 0.85
   2 !   13.2   0.0   1.6e-05     0.037       3      18 ..      60      75 ..      58      77 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 6.1e-07
                HHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27  5 aFkefDkDgdGkIsfeEfkea 25
                 Fk +D ++dG +s +E ++ 
  MMETSP1325-20131115|4507_1 28 TFKSLDANNDGVLSRDEVIAG 48
                7****************9865 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 1.6e-05
                HHHHHHHCTTTSSEBE CS
  PF00036.27  3 keaFkefDkDgdGkIs 18
                  +F+ +D+++dG ++
  MMETSP1325-20131115|4507_1 60 SALFDRLDTNKDGVLT 75
                679**********998 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.1e-06    0.0025       4      24 ..      27      47 ..      24      51 .. 0.89
   2 !   12.4   0.0   4.3e-05     0.098       4      18 ..      61      75 ..      58      77 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.1e-06
                ---GCC-------B---HHHH CS
   PF13405.1  4 eaFklfDkdgdGkidaeELrd 24
                + Fk +D ++dG ++++E+++
  MMETSP1325-20131115|4507_1 27 STFKSLDANNDGVLSRDEVIA 47
                67****************976 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 4.3e-05
                ---GCC-------B- CS
   PF13405.1  4 eaFklfDkdgdGkid 18
                ++F+ +D+++dG ++
  MMETSP1325-20131115|4507_1 61 ALFDRLDTNKDGVLT 75
                79***********99 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   2.6e-05      0.06      23      49 ..      21      47 ..       4      52 .. 0.83
   2 !   14.7   0.0   6.5e-06     0.015      22      42 ..      54      74 ..      46      75 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.6e-05
   PF13833.1 23 seeevdilfrefDtdgdGkisfeEFcv 49
                s+ e+   f+ +D+++dG +s +E ++
  MMETSP1325-20131115|4507_1 21 SKFEAASTFKSLDANNDGVLSRDEVIA 47
                55566677999*************775 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 6.5e-06
   PF13833.1 22 lseeevdilfrefDtdgdGki 42
                + + e+ +lf+ +Dt++dG +
  MMETSP1325-20131115|4507_1 54 MQPAEASALFDRLDTNKDGVL 74
                55789**************98 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.2e-06    0.0095      51     106 ..      20      75 ..       3      77 .. 0.76

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4.2e-06
   PF10591.4  51 eckeaveWkFnqlDtnkdkvlsksElaplraplvklehCikeffksCDadkdkkis 106
                   k ++   F++lD n+d+vls+ E+ +    +    +  + +f++ D++kd+ ++
  MMETSP1325-20131115|4507_1  20 YSKFEAASTFKSLDANNDGVLSRDEVIAGAWRFNMQPAEASALFDRLDTNKDGVLT 75 
                 556677889****************9876665433333457899999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|4494_1  [L=422]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-35  120.8   0.4    7.9e-35  120.4   0.3    1.1  1  PF00884.18 Sulfatase
      5e-06   25.9   0.0    9.1e-06   25.1   0.0    1.4  1  PF01663.17 Type I phosphodiesterase / nucleotide pyrophosphatase
  ------ inclusion threshold ------
       0.02   13.2   0.2      0.061   11.6   0.0    1.7  2  PF02995.12 Protein of unknown function (DUF229)
      0.041   12.6   0.0      0.068   11.8   0.0    1.3  1  PF07394.7  Protein of unknown function (DUF1501)


Domain annotation for each model (and alignments):
>> PF00884.18  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.4   0.3   2.3e-38   7.9e-35      81     377 ..      16     387 ..       2     389 .. 0.81

  Alignments for each domain:
  == domain 1    score: 120.4 bits;  conditional E-value: 2.3e-38
                 TS--HHHHCCCGT-EEEEE----TCGGGHHCCCH.......H----CCC-....CCCCGGGCSC-EEETTTE.S.GGGSHHHHHHHHHHHHH.HHCT.TSSEEEEEE--TTSSS----TTTTTSS-GGGS...............................................HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEEE-----GGGHHH-TT----HHHHHHCCBEEEEEEE----TT..EE-S-EEGGGHHHHHHHH---...........--TTST-----THHHH----..............................S.TT..CCEEEEEEECTB.CCCCCTS.CCCSCCCE......EETTT-TCC- CS
  PF00884.18  81 teetLpellkqaGYntaaigkwhlgwlsrqsvyk.......nrGFdrflgfptgednlknpedveynnsvlr.ppeggysdealldealefl.larn.dkPfflylatlgpHappyapdeyaekyatffddgeeka.........................................rqleaylnsveyvDdaigrvlaaLeenglldnTlvvftSDHgasleegngplrggkgvnayeggtrvPllvwwpggkap.rvseelvshvDlaptildlagi....l.pk.vegpkdrlldgksllptlegka..............................qaddlkavrllnsraivkagweavnldpadasgcs......ydltaDpgel 377
                 ++ t+pel+k+ GY+t     w++g +      +           +++ + p + d+ +n  d + ++  +  + e+ + d+++l + le l  a++ ++P+f  + ++ pH  + +p++y + y++++ ++ +++                                          +++ay+++v+ +D +ig+++++L+ +g++d T++++++DHg  l+e   +  + k+ ++ + +t +P++++ pg        ++lv hvDl+p+i+++agi    + p  +     r  +g+s++p+  ++a                              +addl+ +        v  ++ ++++ +a+  +c       y+ t+Dp e+
  MMETSP1325-20131115|4494_1  16 DCKTIPELFKDEGYRT-----WNNGKIFH----PgkecggeDTDVQSWTEEPFYGDDAYNDGDASITMVTEEmEAENACQDTQILANSLEALqNATAsGDPWFVAVGFHKPHLSFAVPKQYFDLYPNETIELADNPyapaglpavayaswelqnyddvadtgfsggvnetlvdwkayAERQAYQAAVSFTDANIGSLMDELKSLGVWDSTVIAMVGDHGFKLGE---HGAWCKH-TNFDLDTTTPFFLRIPGVTDGgILTDALVEHVDLMPSIAEAAGIplveTcPEdEPWLTSRCTEGVSVVPLITNGAltkadwknasysqyprdasgsmpimgysmtTADDLRFTA------WVEFDYSTNTTEWAMSDDCGrcalelYNHTTDPDEN 387
                 689*************.....66665533....3334456644444455544455555555555555444447889****************956666*********************************99998888999999999999999********************************************************************87...9999999.9********************999********************8555333377778899999******999999988888888888888888888888777776333333322......234444555556666666668889999999999876 PP

>> PF01663.17  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   2.7e-09   9.1e-06     207     258 ..     189     245 ..     172     285 .. 0.81

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 2.7e-09
                 CHHHHHHHHHH--------TTTT-CCCEEEEEE-------B.....-TTSEEEHHHC CS
  PF01663.17 207 vedalrrvDraigqLlealdergllentniilvSDHGmadv.....lnkkvidlnel 258
                  + a++  D +ig L+++l++ g++++t i  v+DHG++       +++ ++dl++ 
  MMETSP1325-20131115|4494_1 189 YQAAVSFTDANIGSLMDELKSLGVWDSTVIAMVGDHGFKLGehgawCKHTNFDLDTT 245
                 4569999*******************************9887777666666666655 PP

>> PF02995.12  Protein of unknown function (DUF229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.16   5.4e+02     196     219 ..       8      31 ..       4      34 .. 0.83
   2 ?   11.6   0.0   1.8e-05     0.061     306     349 ..     188     231 ..     179     252 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.16
  PF02995.12 196 tekkvslDklnfiWkefkekGYeT 219
                 ++ +v   +++ i + fk++GY+T
  MMETSP1325-20131115|4494_1   8 YFREVGCADCKTIPELFKDEGYRT 31 
                 67777888899999*********9 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 1.8e-05
  PF02995.12 306 dkfnllealDedllkfLkklekkgllenslvlllsDHGlrfgkl 349
                  + + ++ +D ++ +++ +l+  g+ + +++ +++DHG + g++
  MMETSP1325-20131115|4494_1 188 AYQAAVSFTDANIGSLMDELKSLGVWDSTVIAMVGDHGFKLGEH 231
                 566778999*******************************9986 PP

>> PF07394.7  Protein of unknown function (DUF1501)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     2e-05     0.068     270     302 ..     193     225 ..     183     233 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2e-05
   PF07394.7 270 akelDqalaaLlkdLkqrGllddTlVvwggEFG 302
                 +  +D ++  L+++Lk  G +d+T++ ++g+ G
  MMETSP1325-20131115|4494_1 193 VSFTDANIGSLMDELKSLGVWDSTVIAMVGDHG 225
                 4679**************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.39s 00:00:01.14 Elapsed: 00:00:00.57
# Mc/sec: 1743.56
//
Query:       MMETSP1325-20131115|4512_1  [L=350]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-98  328.2   0.0    4.8e-98  327.8   0.0    1.2  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  327.8   0.0  3.5e-102   4.8e-98      42     335 .]       2     289 ..       1     289 [. 0.93

  Alignments for each domain:
  == domain 1    score: 327.8 bits;  conditional E-value: 3.5e-102
                 EEEESEEEETTS-HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-.TTTTC---HHHHHHHHHHHHHCCTTTHTEEEEEEEEEEEEETTEEEETTSTTT.......TS-SS.BEEEECTTTCCEEECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EE..EEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT.TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
  PF00225.18  42 eftFdkvfdeeatqeevyeelakplvesvleGynvtifaYGqtgsGKTytmeGkeeeeekGiipraleelFeeieeekeekekefsvkvsylEiYnekiyDLLesek.......ekkkkklkiredskkgkvyvkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekee..vklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaenkkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakni 335
                 +f+Fd+++ ++++q+ev+e + kp+++s+ +Gynv+ifaYGqtgsGKTytmeG    e++G+  r+leelF+ ++e+ ++  +e+++++sylEiYne+++DLL++++       + ++kkl++r+ ++    +v gltev+v+++e+v++l+++g++nr+v+s+++n       a+  + l + ++   ++ ++  +  skl+L+DLAGsEr+skt a+ ++rlkEa+nINkSL+aLg+vI+aL+ + k++hvpYR+SkLT lLqdsL+gnsk+lm++++sp+s n++et++tL+fa+r++++
  MMETSP1325-20131115|4512_1   2 RFEFDAAYRQTSQQAEVFEGV-KPIITSFTDGYNVCIFAYGQTGSGKTYTMEGP--PEDRGVNFRSLEELFRLCQERADK--TEYTLTLSYLEIYNETVRDLLDDTPrgrsgpgAAEEKKLDVRQTADG--NVVPGLTEVTVQNIEDVMALMARGTENRAVGSHDMNX------ALEPLALDHDDQPLGNNIQDagSVRSKLHLIDLAGSERVSKTDAT-GERLKEAQNINKSLSALGDVINALSGK-KAAHVPYRNSKLTFLLQDSLSGNSKVLMFCNISPASYNCAETMCTLNFAARCRSV 289
                 7*******************5.*******************************6..6779***************99988..889********************999***999666667*****9984..69***********************************......777888888775554444445799*******************65.666***********************9.***************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.69
# Mc/sec: 1215.54
//
Query:       MMETSP1325-20131115|4513_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.21   11.1   9.0       0.29   10.6   6.2    1.1  1  PF10278.4  Mediator of RNA pol II transcription subunit 19
       0.85    8.4   2.7        1.1    8.0   1.9    1.2  1  PF02535.17 ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> PF10278.4  Mediator of RNA pol II transcription subunit 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   6.2   4.3e-05      0.29     107     166 ..      84     158 ..      74     166 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 4.3e-05
   PF10278.4 107 qePkkkskekhkkskvkdals................eetlsdseteegfekkkkkkkkedDkerkkkkkekkkkk 166
                 q P++++++ h++++  +a +                 +t++  +++++ +k +k +kk ++k  kkkk++ k+k 
  MMETSP1325-20131115|4513_1  84 Q-PNHNHNHNHNHNHPSHAGQcrdgtdgggsgvaggdGNTPAKGKSKSALKKERKMQKKMKEKMEKKKKEQEKEKG 158
                 4.88888888888887776666677778888877777777777777778888888788777776666666666554 PP

>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   1.9   0.00016       1.1     105     166 ..      77     156 ..      47     166 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00016
  PF02535.17 105 s.........dahshgegrghdkehsettsdeaskskes...................kvenaeseeeeteeeesdhdheskeksesdke 166
                 +         ++h h++ ++h+++  +  + ++ + +                     +          ++ +++ +++ +k+k+e++ke
  MMETSP1325-20131115|4513_1  77 WcardmiqpnHNHNHNHNHNHPSHAGQCRDGTDGGGSGVaggdgntpakgksksalkkE----------RKMQKKMKEKMEKKKKEQEKE 156
                 25555544346666666666666666666666666666599999999876444433221..........222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1657  (0.121197); expected 273.4 (0.02)
Passed bias filter:                      867  (0.0634143); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.42s 00:00:01.03 Elapsed: 00:00:00.55
# Mc/sec: 745.05
//
Query:       MMETSP1325-20131115|4514_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-27   94.4   0.1    7.9e-27   94.2   0.1    1.0  1  PF01593.19 Flavin containing amine oxidoreductase


Domain annotation for each model (and alignments):
>> PF01593.19  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.2   0.1   5.8e-31   7.9e-27     300     450 .]       2     151 ..       1     151 [. 0.88

  Alignments for each domain:
  == domain 1    score: 94.2 bits;  conditional E-value: 5.8e-31
                 SCCSGGT-CEECEECCCSCCS-EEEEECECCCCCHCCSEEEEEEEECCCHHHTTS-HHHHHHHHHHHHHHHHHH...SSB--S.....EEEEEETTTSTTT---ECCHBHHHHHHHHHHHHS-BB.SSEEE--GTT-TTTTTS---TTT---HHHHHHH CS
  PF01593.19 300 rpfwpenldlfgllvsdsasrgelvldwskssgspkrpvllsyvlgdaareleslsdeellervledLrkllgn..edvpdpk.....dtvvtrWstdplargsysyvsvgssgddrpalaepvg.prlffAGehtsrgypgtveGAvlSGlraAaril 450
                 r+fwp+    f  +v d+  +  ++l+ +k++g   +p+l  +++g +   +es+ d+e++  + + L++l+++  e     +     ++   rW+td++arg+ysy +v +  d +++la+p    rlff+Geht r+ pgt +GA++SG raA+++l
  MMETSP1325-20131115|4514_1   2 RVFWPN--VDFIGGVADTSPNCSYFLNMYKHTG---SPILSWMIAGSHVAMMESMEDDEVAVLANKILAGLFPEqwE-R---QpwsivKMKFKRWGTDRFARGAYSYDAVDAHPDQYDDLAAPDPdARLFFCGEHTNREAPGTTNGALRSGQRAAREVL 151
                 78**88..466667777789**********999...7777777777777************************7431.2...23347866688******************************99********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 910.62
//
Query:       MMETSP1325-20131115|4517_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1416  (0.103569); expected 273.4 (0.02)
Passed bias filter:                      695  (0.0508338); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.44s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 474.28
//
Query:       MMETSP1325-20131115|4518_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.44s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|4516_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-17   60.6   9.8    1.2e-16   59.9   6.8    1.3  1  PF00468.12 Ribosomal protein L34


Domain annotation for each model (and alignments):
>> PF00468.12  Ribosomal protein L34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   6.8   8.9e-21   1.2e-16       2      44 .]     142     184 .]     141     184 .] 0.97

  Alignments for each domain:
  == domain 1    score: 59.9 bits;  conditional E-value: 8.9e-21
                 --S----HHHHCT----HHHCTS----HHHHHHTT------CC CS
  PF00468.12   2 krtyqpskrkRkrthGFraRmrtknGRkvLkrRraKGRkrLtv 44 
                 krt+qps+++Rkr+hGF+ R r+k GR + krR +KGRkrL++
  MMETSP1325-20131115|4516_1 142 KRTFQPSTVRRKRQHGFLVRKRSKDGRDIMKRRFLKGRKRLSC 184
                 9****************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 899.86
//
Query:       MMETSP1325-20131115|4519_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.40s 00:00:00.68 Elapsed: 00:00:00.60
# Mc/sec: 203.69
//
Query:       MMETSP1325-20131115|4520_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.82
# Mc/sec: 286.39
//
Query:       MMETSP1325-20131115|4508_1  [L=520]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.86u 0.33s 00:00:01.19 Elapsed: 00:00:00.77
# Mc/sec: 1618.32
//
Query:       MMETSP1325-20131115|4523_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.051   13.4   0.2        2.2    8.2   0.0    2.2  2  PF13041.1  PPR repeat family
        1.2    9.1   4.0         35    4.5   0.0    2.3  2  PF01535.15 PPR repeat


Domain annotation for each model (and alignments):
>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1    0.0041        28      19      48 ..       2      31 ..       1      33 [. 0.84
   2 ?    8.2   0.0   0.00032       2.2       9      38 ..      27      56 ..      19      60 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0041
   PF13041.1 19 veeAfklfneMkkrgikPnvyTYsilikgl 48
                +e+A+++ +eM ++   P++  +  l + l
  MMETSP1325-20131115|4523_1  2 MEKALEMKDEMMRSVDNPDAEVFGNLVRKL 31
                799**********98899988888777766 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00032
   PF13041.1  9 lIsglckkgkveeAfklfneMkkrgikPnv 38
                l++ l+ + ++eeA+ l++e  + g+kP +
  MMETSP1325-20131115|4523_1 27 LVRKLAGQQRIEEALALMDEAADAGLKPRE 56
                5556677889*****************966 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   1.9    0.0076        52      16      28 ..       2      14 ..       1      15 [. 0.91
   2 ?    4.5   0.0    0.0052        35       4      27 ..      25      48 ..      22      52 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.0076
  PF01535.15 16 leeAlelfkeMke 28
                +e+Ale+ +eM +
  MMETSP1325-20131115|4523_1  2 MEKALEMKDEMMR 14
                89*********98 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0052
  PF01535.15  4 nslIsgyckaGkleeAlelfkeMk 27
                  l++ ++   ++eeAl l++e  
  MMETSP1325-20131115|4523_1 25 GNLVRKLAGQQRIEEALALMDEAA 48
                5666677777799*******9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 534.19
//
Query:       MMETSP1325-20131115|4524_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-12   47.8   2.2    1.2e-12   47.6   1.5    1.1  1  PF03151.11 Triose-phosphate Transporter family
    0.00091   19.1   0.9     0.0012   18.7   0.6    1.1  1  PF00892.15 EamA-like transporter family
     0.0016   17.3   1.1     0.0019   17.0   0.7    1.0  1  PF08449.6  UAA transporter family


Domain annotation for each model (and alignments):
>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   1.5   2.7e-16   1.2e-12     101     153 .]       2      54 ..       1      54 [. 0.95

  Alignments for each domain:
  == domain 1    score: 47.6 bits;  conditional E-value: 2.7e-16
  PF03151.11 101 llervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGvvlYsy 153
                 +l  ++++++sv++ +krv+vi+lsv+ f++++++ln+lG+ +al Gv+lY++
  MMETSP1325-20131115|4524_1   2 ILAIITPVSHSVMNSLKRVVVITLSVLYFRNTVSALNGLGICMALGGVFLYER 54 
                 577789*********************************************85 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.6   2.6e-07    0.0012      77     123 ..       5      51 ..       2      54 .. 0.92

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 2.6e-07
  PF00892.15  77 ktsasnaslitslePvftillsvlllgekltlkqllgivlillGvll 123
                  ++++  s+++sl  v++i lsvl+++ +++    lgi+++l Gv+l
  MMETSP1325-20131115|4524_1   5 IITPVSHSVMNSLKRVVVITLSVLYFRNTVSALNGLGICMALGGVFL 51 
                 56777889*************************************98 PP

>> PF08449.6  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.7   4.1e-07    0.0019     251     297 ..       8      54 ..       2      59 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 4.1e-07
   PF08449.6 251 altvtlvttlRKfvslllSvllFgnpltlqqwlGvllVflgillkal 297
                 ++  ++   l ++v + lSvl+F+n++++   lG+ + ++g++l+  
  MMETSP1325-20131115|4524_1   8 PVSHSVMNSLKRVVVITLSVLYFRNTVSALNGLGICMALGGVFLYER 54 
                 5556677788999******************************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 616.93
//
Query:       MMETSP1325-20131115|4522_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0085   16.2   0.1      0.014   15.5   0.1    1.4  1  PF08066.7 PMC2NT (NUC016) domain
  ------ inclusion threshold ------
      0.012   15.4   0.2      0.029   14.2   0.1    1.6  1  PF08654.5 DASH complex subunit Dad2


Domain annotation for each model (and alignments):
>> PF08066.7  PMC2NT (NUC016) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   2.1e-06     0.014      29      89 ..     147     206 ..     122     208 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2.1e-06
   PF08066.7  29 sldeqserLlslinkllksaasksrikkrkdeesvedqwkavvdvlDsllEkvdtllDelk 89 
                 s   ++e+Ll+ i++l  +++s  ++      +++ed+ +++++v+ + +E++++ lDe +
  MMETSP1325-20131115|4522_1 147 STTVTNEQLLRYIKELSGQMDSIADELAVR-MSKMEDSLEGLSNVMRDEFEEIHIKLDERN 206
                 445578899999999999999999999998.9**************************976 PP

>> PF08654.5  DASH complex subunit Dad2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   4.2e-06     0.029      15      52 ..     155     192 ..     151     200 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4.2e-06
   PF08654.5  15 nLkelrelsddLakqleeLeeklstlkdgteavasvla 52 
                  L+ ++els ++ +  +eL+ ++s+++d  e  ++v++
  MMETSP1325-20131115|4522_1 155 LLRYIKELSGQMDSIADELAVRMSKMEDSLEGLSNVMR 192
                 5899********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       565  (0.0413253); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1024.33
//
Query:       MMETSP1325-20131115|4525_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.2   1.3       0.13   12.0   0.9    1.1  1  PF13838.1 Clathrin-H-link


Domain annotation for each model (and alignments):
>> PF13838.1  Clathrin-H-link
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.9   9.5e-06      0.13      23      53 ..      14      44 ..      11      47 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9.5e-06
   PF13838.1 23 eeAAkvAansprgiLRtpetiqrFkqvpaqp 53
                + AA  Aa+sp ++ + p t++ + +v++ p
  MMETSP1325-20131115|4525_1 14 ATAAVSAATSPTSAAKSPTTMSTLCKVKQTP 44
                579*********************9999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 212.51
//
Query:       MMETSP1325-20131115|4521_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-12   47.6   0.0    1.9e-12   47.1   0.0    1.2  1  PF00089.21 Trypsin
    3.1e-11   43.1   0.1    6.2e-11   42.2   0.1    1.5  1  PF13365.1  Trypsin-like peptidase domain
    1.9e-09   37.1   1.3    6.2e-09   35.5   0.9    1.9  1  PF13180.1  PDZ domain
    0.00019   21.4   0.3      0.026   14.5   0.0    2.6  2  PF00595.19 PDZ domain (Also known as DHR or GLGF)
     0.0018   17.6   0.2      0.004   16.5   0.1    1.6  1  PF02907.10 Hepatitis C virus NS3 protease
  ------ inclusion threshold ------
      0.015   13.6   0.4      0.022   13.0   0.3    1.1  1  PF10459.4  Peptidase S46


Domain annotation for each model (and alignments):
>> PF00089.21  Trypsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   8.4e-16   1.9e-12      86     218 ..      25     145 ..       5     147 .. 0.82

  Alignments for each domain:
  == domain 1    score: 47.1 bits;  conditional E-value: 8.4e-16
                 TTTEEEEEESSSS--BSTB-EEBBSSTTHHTTTTSEEEECCHHBSSSTSBESBCBCEEEEEBEHHHHHHTTTTTSTTTEEEEESTSSSB---------EEEEETEB---BEEE.TTCCBTTB-EEEEEGGGGHH CS
  PF00089.21  86 dnDiallklkepvklgdtvrpiclpaassslkvgttclvsGwgrtkekgksdtlqevevpvvsretcksayggkvtenmlcagakggkdacqGDSGGPlvcsdgelvGivswg.kgcakgnrpgvytkvssyld 218
                 d+D+a+l++ ++   ++   pi+l ++ss+l vg+++l+  +g+++     +tl+++ v+++ re      gg+  +  ++++a    ++++G+SGGPl+ s+g l+G++++  +  +    +g++++v++++ 
  MMETSP1325-20131115|4521_1  25 DKDLAVLRIVAS---KSLLTPIQLSRSSSDLLVGQKVLA--IGNPFGLD--HTLTTGIVSALGREVSGA--GGRPLKGCVQTDA----AINPGNSGGPLLDSQGNLIGVNTAIlSASGASAGIGFAIPVDTVRR 145
                 78*********9...999***********99***66655..56665566..99***********74444..3444589999999....*************************7555555569******98765 PP

>> PF13365.1  Trypsin-like peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.1   2.7e-14   6.2e-11      33     120 .]       4     120 ..       1     120 [. 0.80

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 2.7e-14
                 xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF13365.1  33 vrvvsldgrk.edhkakvvkvsaeqlDlAllqve................................sedivgkggvkagsksssskqstkgnrvliitdaathpGsSGgPvldsdGrvvGl 120
                 + v+  ++++  d  a++v++ ++  DlA+l++                                   ++ + g v+a  ++ s   ++  +  ++ tdaa++pG+SGgP+lds+G+++G+
  MMETSP1325-20131115|4521_1   4 IKVTLQGSATpFD--AELVGAEPD-KDLAVLRIVaskslltpiqlsrsssdllvgqkvlaignpfgLDHTLTTGIVSALGREVSGAGGRPLKGCVQ-TDAAINPGNSGGPLLDSQGNLIGV 120
                 5556666666566..*********.********************999999999999999988777555556666666666666655555555555.9**********************8 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.9   2.7e-12   6.2e-09       2      81 ..     160     267 ..     159     268 .. 0.85

  Alignments for each domain:
  == domain 1    score: 35.5 bits;  conditional E-value: 2.7e-12
   PF13180.1   2 diGvsvsqlen...........trgvlvvsVkessPaakaglkp................GDiilkvdgkkvksltdlkslllkkkpGdtvkltvlR..dgkkktvevk 81 
                  +Gv+v +++             +gv v++++ ssPaa+                     GD+i++vd ++v +++dl  ++    +G tv ltv R   gk ++v+vk
  MMETSP1325-20131115|4521_1 160 SLGVQVADDQImrnierqinaqLNGVMVTEINASSPAANPVS-GkglrgmsrradgsmslGDVITMVDKVPVRKVEDLLCAIEESAVGGTVVLTVRRqgTGKLEEVKVK 267
                 688888888888888888888899*********999987633.246777************************************************444556666665 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.018        41       9      39 ..     158     197 ..     149     200 .. 0.79
   2 !   14.5   0.0   1.1e-05     0.026      34      80 ..     206     253 ..     203     254 .. 0.92

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.018
                 TSH---EEEESSTTS.........SSSEEEEESTTTHHTT CS
  PF00595.19   9 rgglGfslkggsdkr.........dkgifvsevvpggaae 39 
                 r +lG++++ ++  r          +g+ v+e+++ ++a+
  MMETSP1325-20131115|4521_1 158 RPSLGVQVADDQIMRnierqinaqLNGVMVTEINASSPAA 197
                 5678888888777778888899889***********6664 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 1.1e-05
                 TTHHTTTTS.BSTTCEEEEETTEBGTTSHHHHHHHHHHTHHSEEEEEE CS
  PF00595.19  34 pggaaeagg.lkeGDkIlsvNgvdvenvshdeavqaikgkkgevtLti 80 
                 +g++  a+g  + GD+I+ v+ v+v++v+++ ++++    +g+v Lt+
  MMETSP1325-20131115|4521_1 206 RGMSRRADGsMSLGDVITMVDKVPVRKVEDLLCAIEESAVGGTVVLTV 253
                 6777789999******************************99999998 PP

>> PF02907.10  Hepatitis C virus NS3 protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   1.8e-06     0.004     104     147 ..     100     144 ..      84     146 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.8e-06
  PF02907.10 104 selkGssGsPilCdsGhvvGllvaavcsggvvkavrfv.Pvetle 147
                 +   G sG+P+l ++G  +G+ +a++ + g    + f  Pv+t+ 
  MMETSP1325-20131115|4521_1 100 AINPGNSGGPLLDSQGNLIGVNTAILSASGASAGIGFAiPVDTVR 144
                 55679********************************98*99875 PP

>> PF10459.4  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   9.7e-06     0.022     624     650 ..      95     121 ..      88     124 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 9.7e-06
   PF10459.4 624 FlstnDitGGNsGSPvlnakgeLvGla 650
                   +++ i  GNsG P+l+++g+L+G++
  MMETSP1325-20131115|4521_1  95 VQTDAAINPGNSGGPLLDSQGNLIGVN 121
                 567888999****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 1281.13
//
Query:       MMETSP1325-20131115|4526_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   13.8   1.5      0.032   13.6   1.0    1.1  1  PF11939.3  Protein of unknown function (DUF3457)
      0.032   14.4   2.6      0.038   14.2   1.8    1.3  1  PF02465.13 Flagellar hook-associated protein 2 C-terminus
      0.034   12.9   0.7      0.041   12.6   0.5    1.1  1  PF03223.10 V-ATPase subunit C
      0.041   12.1   2.5      0.043   12.0   1.7    1.0  1  PF05872.7  Bacterial protein of unknown function (DUF853)
      0.051   13.0   0.3      0.053   13.0   0.2    1.0  1  PF12902.2  Ferritin-like
      0.071   13.0   3.4      0.088   12.7   2.4    1.1  1  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
      0.078   11.7   4.0      0.082   11.6   2.8    1.0  1  PF14362.1  Domain of unknown function (DUF4407)
       0.14   12.3   2.5       0.19   11.9   1.7    1.3  1  PF06005.7  Protein of unknown function (DUF904)
       0.38   10.1   4.9       0.46    9.9   3.4    1.3  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF11939.3  Protein of unknown function (DUF3457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.0   2.1e-05     0.032      78     143 ..       9      75 ..       4      93 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.1e-05
   PF11939.3  78 lalpsgslefivneldgvGayks.cSLfSPmfefadqaaavatAeavlaallspeereeadaaaeap 143
                  +lps+  e++++el++  +++   SL S + +  +q +a+a A + l++  +  +r+++++ a++ 
  MMETSP1325-20131115|4526_1   9 SELPSKVEEWVMSELQASETVNYlASLESKVAQRDEQMQAQARAYQSLKTAYESLQRQAQSKXAASG 75 
                 5799999999999998777766426****************************88888876666532 PP

>> PF02465.13  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.8   2.5e-05     0.038      22      66 ..      37      83 ..      20     110 .] 0.64

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2.5e-05
  PF02465.13 22 drlkqqeqkleaklsaygtlksalsdlqs.alkalkst.safntkka 66
                ++ +q+ ++++a+  ay++lk+a ++lq  a ++ +++ ++  +++a
  MMETSP1325-20131115|4526_1 37 SKVAQRDEQMQAQARAYQSLKTAYESLQRqAQSKXAASgDSGRQRQA 83
                6789999*********************9444444333234444444 PP

>> PF03223.10  V-ATPase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.5   2.7e-05     0.041     104     156 ..      17      68 ..       4      74 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.7e-05
                 ---TTTS-TTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT- CS
  PF03223.10 104 qWdmakypikqslreivdiiskeiaqidtdlktksqaYnnlkanlqnlekkkt 156
                 +W m+  ++++++ + ++++++++aq d+++++++ aY++lk+  ++l+++ +
  MMETSP1325-20131115|4526_1  17 EWVMSELQASETV-NYLASLESKVAQRDEQMQAQARAYQSLKTAYESLQRQAQ 68 
                 5888888888776.5667899****************************9876 PP

>> PF05872.7  Bacterial protein of unknown function (DUF853)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.7   2.8e-05     0.043     359     444 ..       2      88 ..       1     109 [. 0.73

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.8e-05
   PF05872.7 359 alvsvLdekGaPsiveralvv.pPas.rlgplseeeraalvqespvagkydeeidresayevLakkvaeaaeaaeqaaaeeekeeesg 444
                 alvs+L+ +  Ps ve  ++    as  ++ l++ e++ + ++++++++ +     ++aye L+++++++ +a+ ++  ++++ ++s+
  MMETSP1325-20131115|4526_1   2 ALVSMLESE-LPSKVEEWVMSeLQASeTVNYLASLESKVAQRDEQMQAQARAYQSLKTAYESLQRQAQSKXAASGDSGRQRQAWQQSE 88 
                 99****886.6666665555414455257889999999999999***********************999888877665555433333 PP

>> PF12902.2  Ferritin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   3.5e-05     0.053      96     169 ..       6      90 ..       1     105 [. 0.60

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.5e-05
   PF12902.2  96 FlaiEaPeellaeak...........lseeekkkakeeaveaaeseeystigefYeairegletleeeakeekgeelftgep.ekq 169
                 +l+ E P+++ + +            l + e+k a++++ ++a++++y+++ + Ye +++++++    a+ ++g++ ++ ++ e++
  MMETSP1325-20131115|4526_1   6 MLESELPSKVEEWVMselqasetvnyLASLESKVAQRDEQMQAQARAYQSLKTAYESLQRQAQSK-XAASGDSGRQRQAWQQsEHR 90 
                 66667777443333366666666667555666677777777788888888888898887777544.33444455444333322444 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   2.4   5.8e-05     0.088      33     101 ..      29      96 ..      19     107 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.8e-05
   PF13094.1  33 erqlaaelksielLqeeirreeaelekdeekleeLeknakalererkeesknlhpvlqelesevleena 101
                  ++la  ++ +++  e+ +++  ++++ +   e+L+++a+ + +   +  ++ ++  q++e+ v++++a
  MMETSP1325-20131115|4526_1  29 VNYLASLESKVAQRDEQMQAQARAYQSLKTAYESLQRQAQSKXAASGDSGRQ-RQAWQQSEHRVASDDA 96 
                 468999999999*********************************9999999.9999999999998865 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.8   5.4e-05     0.082     121     193 ..      23      95 ..       4     109 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5.4e-05
   PF14362.1 121 eqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealda 193
                  qa+   ++ asl++k a+++++++a  +++++++++++ +++++q+    +g +g++ +   + e + a d+
  MMETSP1325-20131115|4526_1  23 LQASETVNYLASLESKVAQRDEQMQAQARAYQSLKTAYESLQRQAQSKXAASGDSGRQRQAWQQSEHRVASDD 95 
                 3333334444468899999999999999999999999999999999999988777777766555555555444 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.7   0.00012      0.19      10      60 ..      22      86 ..       9      91 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00012
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..............HHH---TT CS
   PF06005.7 10 eskiqqAvdtialLqmeieeLkeeneqlkeeneeLeeenkklk..............eereawqe 60
                e + +++v+  a L+ ++++  e+ ++++++ ++L+   + l+              ++r+awq+
  MMETSP1325-20131115|4526_1 22 ELQASETVNYLASLESKVAQRDEQMQAQARAYQSLKTAYESLQrqaqskxaasgdsgRQRQAWQQ 86
                667899******************99999**************8888888888888888888886 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.4   0.00031      0.46     142     186 ..      25      72 ..       5      92 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00031
   PF04156.9 142 lakeirelr...eeisdlkeevqelrselerlqedlqrlqeklaelqr 186
                 +++ +  l    +++ + +e++q +  ++++l+++++ lq++ +++ +
  MMETSP1325-20131115|4526_1  25 ASETVNYLAsleSKVAQRDEQMQAQARAYQSLKTAYESLQRQAQSKXA 72 
                 333333333444888889999999999999999999999999988755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1225  (0.0895992); expected 273.4 (0.02)
Passed bias filter:                      657  (0.0480544); expected 273.4 (0.02)
Passed Vit filter:                        76  (0.00555881); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 560.85
//
Query:       MMETSP1325-20131115|4529_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-10   40.3   0.0    2.1e-10   40.2   0.0    1.0  1  PF01426.13 BAH domain


Domain annotation for each model (and alignments):
>> PF01426.13  BAH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.0   1.6e-14   2.1e-10      23     111 ..      10     105 ..       2     107 .] 0.79

  Alignments for each domain:
  == domain 1    score: 40.2 bits;  conditional E-value: 1.6e-14
                 EEEEEEEEECHHHHCEEEEEEEESGGGS........HCCHCSTT......TEEEEEEEEEEEEGGGEEEEEEEEEHHHHTTCHHHHH-CCCEEEEEEEEETTT CS
  PF01426.13  23 rrieelkenakneeatvlvdwflrPeet........sllklrqk......rEvfltreseilplaairgkcrVvllsdgeeaqnylpklddtFycslvydpea 111
                 +ri  l+  +    +t++++w++rP ++               +      +E+f+++ ++ + +++i ++crV    + +     +++++ +Fyc+++y  ++
  MMETSP1325-20131115|4529_1  10 ARIMDLWGHDRSR-ETARCRWYARPADIaddvlsthP------HadelapNEIFVSNAEANVRITSIVRVCRVAFPPEENPDPDAKENDPPVFYCRSQYFDKK 105
                 7899999999998.**************764433222......2666777***********************8766655555455349*********96655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 557.41
//
Query:       MMETSP1325-20131115|4530_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 449.32
//
Query:       MMETSP1325-20131115|4531_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-10   39.3   0.0    3.8e-10   39.2   0.0    1.0  1  PF00069.20 Protein kinase domain
    7.7e-07   28.3   0.0      8e-07   28.3   0.0    1.0  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.0   5.5e-14   3.8e-10     168     250 ..       1      78 [.       1      81 [] 0.93

  Alignments for each domain:
  == domain 1    score: 39.2 bits;  conditional E-value: 5.5e-14
                 HHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS-- CS
  PF00069.20 168 EvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRlt 250
                 Ev++ +++y++++DvWs+G +++e++t + p++     ++   i +i + + +  +p++ s  ++ +d+++  l  dp++R +
  MMETSP1325-20131115|4531_1   1 EVIK-QSGYGRSSDVWSIGATVIEMATAHHPWPAL--SNNFTAIFEIANATSPPAIPETLS--DDGRDFLRCALVIDPKARAS 78 
                 8999.****************************99..899999999999999999998866..******************98 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   1.2e-10     8e-07     175     251 ..       1      78 [.       1      81 [] 0.87

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 1.2e-10
                 HHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTS.HHHHHHHHH.HTT-BS---TTSBHHHHHHHHHHT-SSGGGS-- CS
  PF07714.12 175 EslkekkftsksDvWsfGvllwEiftlgespypgl.sneevlell.kegkrlekpekcpeelyelmkqCweeepeeRpt 251
                 E++k++ +   sDvWs G ++ E++t +++p+p l +n +++  + +++   + pe+ +++  ++++  +  +p+ R +
  MMETSP1325-20131115|4531_1   1 EVIKQSGYGRSSDVWSIGATVIEMAT-AHHPWPALsNNFTAIFEIaNATSPPAIPETLSDDGRDFLRCALVIDPKARAS 78 
                 899***********************.77******6555666666488888999*******999999999999999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 404.39
//
Query:       MMETSP1325-20131115|4534_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0019   17.9   1.2     0.0023   17.6   0.9    1.1  1  PF03656.8 Pam16


Domain annotation for each model (and alignments):
>> PF03656.8  Pam16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.9   1.6e-07    0.0023      14      58 ..      21      65 ..      13      71 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.6e-07
   PF03656.8 14 tqvvgkalaralrqeiaaaraaadartsasereaaksnlk.Gisle 58
                 qv+ + l +alr++  aar a+da++ a++ e+++++   G+ l 
  MMETSP1325-20131115|4534_1 21 WQVMVRNLRKALREAG-AARSAKDAGNAAGKAENGAAEXAsGVRLT 65
                59999********998.889999********999998876699875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 374.70
//
Query:       MMETSP1325-20131115|4535_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 436.48
//
Query:       MMETSP1325-20131115|4536_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|4539_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 207.38
//
Query:       MMETSP1325-20131115|4540_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 655.33
//
Query:       MMETSP1325-20131115|4527_1  [L=441]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-56  191.2   0.0    1.6e-56  190.6   0.0    1.2  1  PF00009.22 Elongation factor Tu GTP binding domain
    7.7e-36  122.1   0.1      1e-34  118.5   0.0    2.3  2  PF03143.12 Elongation factor Tu C-terminal domain
    2.1e-16   59.6   0.2    5.4e-16   58.3   0.1    1.8  1  PF03144.20 Elongation factor Tu domain 2
    1.1e-05   25.2   0.0    2.8e-05   23.9   0.0    1.7  1  PF01926.18 50S ribosome-binding GTPase
    0.00081   18.4   0.0     0.0016   17.5   0.0    1.4  1  PF04670.7  Gtr1/RagA G protein conserved region
     0.0033   17.7   0.3      0.041   14.2   0.2    2.6  1  PF08477.8  Miro-like protein
     0.0037   17.0   0.4     0.0093   15.7   0.1    1.8  2  PF02774.13 Semialdehyde dehydrogenase, dimerisation domain


Domain annotation for each model (and alignments):
>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.6   0.0     8e-60   1.6e-56       2     184 ..       6     222 ..       5     226 .. 0.92

  Alignments for each domain:
  == domain 1    score: 190.6 bits;  conditional E-value: 8e-60
                 GEEEEEEEESTT---HHHHHHHHHHCCCCEHHHHHH.HC-..............HHHCCHHHH---BBSSEEEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.......S-HHHHHHHHHHHHTT--.EEEEEE-TTST.....CHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHH............HHHHHHHH CS
  PF00009.22   2 kirnigiighvDhGKtTltdallykagaiskrgeea.egerl............ldklkeerergiTiksaaisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.......vepqTeevlrlakklgvk.iivviNKiDrv.....eaeleeiveelkekllekylekgeeevpvvpgSalkgegid............aLleaive 184
                  ++n+++ighvD+GK+T+t++l+yk+g i+kr+ e+ e+e++            ld+lk+erergiTi++a +++e  + ++ +++iD+PGH+dF+k++i+g++++D+a+lv+d+++G          qT+e++ la +lgvk +iv++NK+D++     ea+++ei++e++  +l+k+++k   ++p+vp+S++ g+++              Llea+++
  MMETSP1325-20131115|4527_1   6 VHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKfEKEAAelgkgsfkyawvLDNLKAERERGITIDIALWKFE--SPSYYFTVIDAPGHRDFIKNMITGTSQADVAILVIDSSQGgfeagisKDGQTREHALLAFTLGVKqMIVCMNKMDDTtvmygEARYKEIKQEVS-GYLKKVGYKPM-KIPFVPISGWAGDNMIdkstnmpwykgpYLLEALDN 222
                 599*******************************99733444678999999*************************..**********************************************9***********************************************.788******95.*************88767777777777677877776 PP

>> PF03143.12  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.24   4.6e+02      27      66 ..     266     301 ..     255     309 .. 0.67
   2 !  118.5   0.0   5.3e-38     1e-34       5      96 ..     325     429 ..     321     430 .. 0.95

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.24
  PF03143.12  27 pvlyvrTadvtgkivellkkldsekkefvkpGdnvkveve 66 
                 +++    ++ ++k ve++    +e  e ++pGdnv ++v+
  MMETSP1325-20131115|4527_1 266 CTFAPTGVSTEVKSVEMH----HEALEQATPGDNVGFNVK 301
                 444444555556666662....45559999***9988876 PP

  == domain 2    score: 118.5 bits;  conditional E-value: 5.3e-38
  PF03143.12   5 htkfkAqvyvlnkptpikagYrpvlyvrTadvtgkivellkkld..sekk.....efvkpGdnvkvevelikpiavekgk......rFaiReggrTvavGvvtev 96 
                 +++f+Aqv+++n+p++i+agY+pvl+++Ta+v++k++e+ +k+d  s+k+     +fvk+Gd++++++e++kp++ve ++      rFa+R++++TvavGv+++v
  MMETSP1325-20131115|4527_1 325 CANFTAQVIIMNHPGQISAGYAPVLDCHTAHVACKFKEISEKMDrrSGKVteenpKFVKNGDACIATLEPTKPMCVEAFTdspplgRFAVRDMRQTVAVGVIKAV 429
                 789*****************************************97666688899***********************************************987 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.1   2.8e-19   5.4e-16       1      73 [.     248     314 ..     248     315 .. 0.95

  Alignments for each domain:
  == domain 1    score: 58.3 bits;  conditional E-value: 2.8e-19
                 EEEEEEEEEE--EETTEEEEEETTTCTEEEEEEEEEEEEETTCEESEEECEE--EEEESSSGGGGGTT---EE CS
  PF03144.20   1 GtvatgrvysGtlkkGdtvrilgndtskkeivtrvrsletfngdldeavaganaGvivaikgledaiikGdtl 73 
                 Gtv  grv++G++k+G+   +    t+ +   t+v+s+e++++ l++a +g+n+G++v+   ++d i++G + 
  MMETSP1325-20131115|4527_1 248 GTVPVGRVETGIIKPGMVCTF--APTGVS---TEVKSVEMHHEALEQATPGDNVGFNVKNLSVKD-IKRGYVA 314
                 9********************..777667...*********************************.****985 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.4e-08   2.8e-05       2     114 .]      10     154 ..       9     154 .. 0.63

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 1.4e-08
                 EEEE--TT---HHHHHHHH.........CSTCTE.........................ETS-TT-SSSESEEEEETTE..EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS.......HHHH....HHHHHHHHHHTCCCEEEEEEC CS
  PF01926.18   2 vaivGrpNvGKStLinaLt.........gekaak.........................vsdypgtTrditenevkkek..iilvDtPGiiegasedkeiegikkylekveradvlllvvdasa.......vlke....adkellneleakkplilvlnk 114
                 ++++G+  +GKSt    L+              +                          +   g T di   ++++    ++++D PG        +   +ik+++    +adv++lv+d+s+          +     +++ll+ +   k++i+++nk
  MMETSP1325-20131115|4527_1  10 LVVIGHVDAGKSTTTGHLIykcggidkrT----IekfekeaaelgkgsfkyawvldnlkAERERGITIDIALWKFESPSyyFTVIDAPGHR------D---FIKNMITGTSQADVAILVIDSSQggfeagiS--KdgqtREHALLAFTLGVKQMIVCMNK 154
                 689***************85444332220....13344444445555555555555555677777777774444444435579******42......3...7889999*************88776655431..13443333333333366788888887 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   8.3e-07    0.0016      19     152 ..      59     186 ..      47     198 .. 0.73

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 8.3e-07
   PF04670.7  19 iFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeil.eallqyspeak.vfvlihKmDlisedereeifeerkeeireeiedleieel 152
                 +++n+ a+   + g+Tid+   +++  +  ++ ++D +G  +f++n +     +  s+ +v i V+D+++  +e+ ++k  ++  +all +   +k + v ++KmD  + ++ e  ++e+k+e++  +++++++ +
  MMETSP1325-20131115|4527_1  59 VLDNLKAER--ERGITIDIALWKFESPS-YYFTVIDAPGHRDFIKNMI-----TGTSQADVAILVIDSSQGGFEAGISKDGQTReHALLAFTLGVKqMIVCMNKMDDTTVMYGEARYKEIKQEVSGYLKKVGYKPM 186
                 556665554..55899999999998555.9****************75.....6678999*********665555555443333033444444443156789***********************99999988743 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2   2.1e-05     0.041       2      86 ..      10     121 ..       9     156 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2.1e-05
   PF08477.8   2 vvvvGdkgvGKssllsqlvgeefp...........................kkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltde 86 
                 +vv+G  ++GKs+    l+++                              ++   e   g t+ + +   +  + ++ + d  g+ ++ k+ +    +ad+++lv+d++++
  MMETSP1325-20131115|4527_1  10 LVVIGHVDAGKSTTTGHLIYKCGGidkrtiekfekeaaelgkgsfkyawvlDNLKAERERGITIDIALWKFESPSYYFTVIDAPGHRDFIKNMITGTSQADVAILVIDSSQG 121
                 68999999999998888876655566678888887777777777777766655555556666666666666666777**************75555*************985 PP

>> PF02774.13  Semialdehyde dehydrogenase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.5   2.9e+03     155     169 ..     247     261 ..     237     269 .. 0.74
   2 !   15.7   0.1   4.8e-06    0.0093      85     173 ..     331     421 ..     272     432 .. 0.64

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.5
                 --SEEEE-EEEETTC CS
  PF02774.13 155 tnsvsVGRirkdemg 169
                   +v+VGR+++  + 
  MMETSP1325-20131115|4527_1 247 IGTVPVGRVETGIIK 261
                 5689*****987655 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 4.8e-06
                 HHHCCETE.CEEEEEEEESCEC--EEEEEEEESCSHHHHHHHHHHHHTTSSCEEEES-...CCCCCCHHHHTT-.--SEEEE-EEEETTCCEEE CS
  PF02774.13  85 kkilefte.kvsatcvrVPvlrGhseavtiklklkdveveeveellaaapevkvvvne...eedrPtpaavagg.tnsvsVGRirkdemgdegl 173
                 ++i+ +++ ++sa    +Pvl++h++ v +k+k+  +++++   ++++++ ++v   +    + +Pt  + ++  t+s + GR+ +  m+++ +
  MMETSP1325-20131115|4527_1 331 QVIIMNHPgQISAGY--APVLDCHTAHVACKFKEISEKMDRRSGKVTEENPKFVKNGDaciATLEPTKPMCVEAfTDSPPLGRFAVRDMRQT-V 421
                 344444445888766..8***************6666777777777777555666555777566666666665568*********9999986.2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.76u 0.35s 00:00:01.10 Elapsed: 00:00:00.52
# Mc/sec: 2032.30
//
Query:       MMETSP1325-20131115|4542_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|4543_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.001   18.5   0.1     0.0015   18.0   0.1    1.2  1  PF12799.2 Leucine Rich repeats (2 copies)
     0.0039   16.9   0.2      0.015   15.2   0.0    2.0  3  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   2.1e-07    0.0015       3      38 ..       2      37 ..       1      44 [. 0.88

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2.1e-07
   PF12799.2  3 LevLdLsnNnIk.dlppelanLpnLktLnLsnNpisd 38
                L+++ L +N ++  ++  la+Lp L+  +L nN+++d
  MMETSP1325-20131115|4543_1  2 LTSVCLPSNLLEgGIEV-LASLPVLEDVDLRNNQLTD 37
                67777899999966999.******************9 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.1   7.6e+03       4      13 ..       2      11 ..       2      20 .. 0.60
   2 !   15.2   0.0   2.1e-06     0.015       1      22 [.      22      43 ..      22      46 .. 0.89
   3 ?   -3.0   0.0       1.6   1.1e+04       8      16 ..      53      61 ..      52      63 .. 0.67

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.1
   PF13516.1  4 LtsLdLsnNq 13
                Lts +L +N 
  MMETSP1325-20131115|4543_1  2 LTSVCLPSNL 11
                5666665554 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 2.1e-06
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaL 22
                l+ L++ dL nNq++d G+  +
  MMETSP1325-20131115|4543_1 22 LPVLEDVDLRNNQLTDAGADEI 43
                5789**************9765 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 1.6
   PF13516.1  8 dLsnNqigd 16
                +L +N+  d
  MMETSP1325-20131115|4543_1 53 RLDDNPGFD 61
                578887555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 525.16
//
Query:       MMETSP1325-20131115|4545_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 797.25
//
Query:       MMETSP1325-20131115|4548_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00044   19.8   0.1    0.00046   19.7   0.0    1.0  1  PF07574.8 Nse1 non-SMC component of SMC5-6 complex


Domain annotation for each model (and alignments):
>> PF07574.8  Nse1 non-SMC component of SMC5-6 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   3.4e-08   0.00046      53     108 ..       7      64 ..       2      65 .] 0.87

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 3.4e-08
   PF07574.8  53 iNeklsplkykikkvrygqpng.eryYvyvntsaddemkla.ttfsaeelefikklie 108
                 iN  l+ +++++++ + ++ +g +   ++vn+++dd++k++ t++ ++el+  k++++
  MMETSP1325-20131115|4548_1   7 INRSLKVMNMEVRSTIVPDSEGnQLVHAVVNLVNDDIAKMNgTKLQPAELDVYKQAVQ 64 
                 9************99998666516689*************7699********999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 278.15
//
Query:       MMETSP1325-20131115|4547_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.035   12.2   3.7      0.036   12.2   2.5    1.1  1  PF06375.6  Bovine leukaemia virus receptor (BLVR)
      0.071   11.1   6.9      0.075   11.0   4.8    1.1  1  PF03154.10 Atrophin-1 family
       0.31   10.3   9.7       0.37   10.1   6.8    1.1  1  PF03064.11 HSV U79 / HCMV P34
       0.83    8.1  11.0       0.87    8.1   7.6    1.0  1  PF12569.3  NMDA receptor-regulated protein 1
        1.7    7.6   6.5          2    7.4   4.5    1.1  1  PF07222.7  Proacrosin binding protein sp32
          2    7.0   7.9        2.4    6.8   5.4    1.0  1  PF01698.11 Floricaula / Leafy protein


Domain annotation for each model (and alignments):
>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.5   1.6e-05     0.036     268     310 ..      44      88 ..       6     119 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.6e-05
   PF06375.6 268 dakaeeskkssktkkkkqrkekeekkkkkkkskkr..chqseeaa 310
                   ++   +++ k  kk  +k+k+e++++k  +++r    +++++ 
  MMETSP1325-20131115|4547_1  44 RQRNRAKRQAIKMEKKAAKKQKREEERQKVAEHERekGTEKDGGQ 88 
                 222333344444444444444444433333333330023333333 PP

>> PF03154.10  Atrophin-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   4.8   3.3e-05     0.075     575     625 ..      36      86 ..      22     120 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.3e-05
  PF03154.10 575 lassklakkreeavekakreaeqkareererekekekerererereaeraa 625
                  a+ kl+k++ + +++   + e+ka ++++re e++k  e ere+ +e+  
  MMETSP1325-20131115|4547_1  36 AAGGKLSKRQRNRAKRQAIKMEKKAAKKQKREEERQKVAEHEREKGTEKDG 86 
                 578899988776666666678999999999999999988888888777654 PP

>> PF03064.11  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   6.8   0.00016      0.37     149     213 ..      30      94 ..      11     110 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00016
  PF03064.11 149 vaekvcra.lsrkksdderkkksakqkekRrdedskkkkedrkkkqeekrtsdedkrsgkgdesGs 213
                 va++   a  ++ k+  +r k+ a + ek+  +  +k++e+r+k  e++r+++++k +g++ +   
  MMETSP1325-20131115|4547_1  30 VAAATTAAgGKLSKRQRNRAKRQAIKMEKKAAK-KQKREEERQKVAEHEREKGTEKDGGQDMGIEK 94 
                 333333220344445566666666666666666.68999999999999999999888877655422 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   7.6   0.00038      0.87     399     458 ..      24      84 ..       2     103 .. 0.50

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00038
   PF12569.3 399 eeeeaanaelsaaerkklrkkakkaekkaekeeaekaekeeekk.aaekkakkedeetkkk 458
                 ++ +aa+a+ + a   kl k+++  +k+++ + ++ka+k+++++ +++k a++e e+  +k
  MMETSP1325-20131115|4547_1  24 AAMDAAVAAATTAAGGKLSKRQRNRAKRQAIKMEKKAAKKQKREeERQKVAEHEREKGTEK 84 
                 3334444455555555666655555444444444443333332212222222222222222 PP

>> PF07222.7  Proacrosin binding protein sp32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.5   0.00087         2     187     242 ..      38      83 ..       3      95 .. 0.46

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00087
   PF07222.7 187 dekekvkaakpkeeqllekkqeqleehkteekkkqeeqeeeekeeeakqeegeGed 242
                 ++k  +++          +++++ ++ k+e+k  ++++ eee+++ a+ e  +G++
  MMETSP1325-20131115|4547_1  38 GGKLSKRQ----------RNRAKRQAIKMEKKAAKKQKREEERQKVAEHEREKGTE 83 
                 22222222..........22233334444444444444444444444444444443 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.4     0.001       2.4     163     215 ..      31      86 ..       4     102 .. 0.32

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.001
  PF01698.11 163 s.....ggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeede 215
                 +     +g++l++++   a+++   + +kka +kkqkr++++++++e++ ++ +e+d 
  MMETSP1325-20131115|4547_1  31 AaattaAGGKLSKRQRNRAKRQAI-KMEKKA-AKKQKREEERQKVAEHEREKGTEKDG 86 
                 111111111111111111111111.122222.11222222222222222222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2199  (0.16084); expected 273.4 (0.02)
Passed bias filter:                     1183  (0.0865272); expected 273.4 (0.02)
Passed Vit filter:                       170  (0.0124342); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.43s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 610.84
//
Query:       MMETSP1325-20131115|4551_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|4552_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0027   16.6   0.0     0.0031   16.4   0.0    1.1  1  PF00144.19 Beta-lactamase


Domain annotation for each model (and alignments):
>> PF00144.19  Beta-lactamase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.3e-07    0.0031     220     317 ..      63     162 ..      12     173 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 2.3e-07
                 ..EEEHHHHHHHHHHHHHTGGGSSSHHHHHH.HCHCHSEEEE--SEEE--EEESSEEHHHHH..SEEEEE..SSTCEEEEEEGGGTEEEEEEESSSS.HHH CS
  PF00144.19 220 glistardlarflglalegglllsaetlaql.taklssgttrpagiraglglGwvladktga..pgtfghtGggygtyvfvdpeanlvvavltnrdppned 317
                 +   +a  la  +  ++ +g++ ++++l++   a+l++   r +  +++++lG++   + g     +fg+ G   +    +dp+++  +av++n+  p + 
  MMETSP1325-20131115|4552_1  63 NTHFSAYGLATIYAALAHDGSVHGRRVLSADyVARLKRDIERAPHRKESWPLGFRKFRHVGRskVAAFGFNG-ISNLTGLADPATGTSMAVMVNQVSPKPT 162
                 555555556666644445555555555555435666788888888899999999999999999999******.7777788***************998443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 943.25
//
Query:       MMETSP1325-20131115|4554_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.069   14.1   0.0      0.071   14.1   0.0    1.1  1  PF04134.7 Protein of unknown function, DUF393


Domain annotation for each model (and alignments):
>> PF04134.7  Protein of unknown function, DUF393
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.2e-06     0.071      62     108 ..      20      66 ..       6      71 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.2e-06
   PF04134.7  62 vlsgsdAalel.wrklpgllrllawllrlprirpvldavYrliarnRy 108
                 ++  +dA+l+l ++ ++++ r l++ ++lp + +vld++++l a++R 
  MMETSP1325-20131115|4554_1  20 LFNHLDAVLLLlMSLTSVSVRALLLTVFLPDV-EVLDETFELRADRRS 66 
                 67889****999999999**************.8***********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 301.61
//
Query:       MMETSP1325-20131115|4557_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-06   25.8   0.1    3.1e-06   25.8   0.1    1.0  1  PF00999.16 Sodium/hydrogen exchanger family


Domain annotation for each model (and alignments):
>> PF00999.16  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.1   2.2e-10   3.1e-06      27      91 ..      11      71 ..       1      72 [] 0.80

  Alignments for each domain:
  == domain 1    score: 25.8 bits;  conditional E-value: 2.2e-10
                XXXXXXXXXXXXX.....X---S-SSHHHHS--SSTT----GGGGXXXXXXXXXXXXXXXXXXXX CS
  PF00999.16 27 ilaGlllGpsglglvepsleldlevlselglplllFlaGleldlrelrkngksilllallgvlis 91
                 + G  lG s+     +  ++d++v+++  lp+l+F++++++d+  + +++ +il+la++gv +s
  MMETSP1325-20131115|4557_1 11 KVWGEELGTSLDA--WE--TIDPHVVLTAMLPILIFESAFSTDVHIFLHELPQILALAVPGVMFS 71
                5555555555555..23..58*****************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|4553_1  [L=307]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.60
# Mc/sec: 1226.14
//
Query:       MMETSP1325-20131115|4559_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0052   16.5   0.0     0.0072   16.1   0.0    1.3  1  PF13424.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.017   14.5   0.0       0.04   13.4   0.0    1.7  2  PF00515.23 Tetratricopeptide repeat
      0.041   13.3   0.1        4.6    6.8   0.1    2.2  2  PF09182.5  Bacterial purine repressor, N-terminal


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.6e-06    0.0072      19      61 ..       2      43 ..       1      60 [. 0.87

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.6e-06
   PF13424.1 19 gdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgd 61
                g+yd+A +++e+  e+ ++++   h+d  ++l +++++yl + +
  MMETSP1325-20131115|4559_1  2 GQYDKAVDCFERNFEIaRSSVSGGHGD--TSLVDISRVYLGMAK 43
                99**************99999999***..58*******987755 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.8e-06      0.04      15      31 ..       2      18 ..       1      21 [. 0.85
   2 ?   -2.9   0.0       1.3   5.7e+03       3      11 ..      64      72 ..      63      74 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 8.8e-06
                T-HHHHHHHHHHHHHHH CS
  PF00515.23 15 gkydeAleyyekALeln 31
                g+yd+A++++e+  e+ 
  MMETSP1325-20131115|4559_1  2 GQYDKAVDCFERNFEIA 18
                9**********977775 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.3
                HHHHHHHHH CS
  PF00515.23  3 alynlGnay 11
                +++ +G ++
  MMETSP1325-20131115|4559_1 64 VWKTRGTLH 72
                699999887 PP

>> PF09182.5  Bacterial purine repressor, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0    0.0047        21      24      38 ..       9      23 ..       6      33 .. 0.90
   2 ?    6.8   0.1     0.001       4.6      44      65 ..      59      80 ..      54      82 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0047
                HHHHHHHT--HHHHH CS
   PF09182.5 24 tkfaerfesAKSsiS 38
                + f   fe A+Ss+S
  MMETSP1325-20131115|4559_1  9 DCFERNFEIARSSVS 23
                57999*********9 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.001
                HHHHHHH-----EE-------- CS
   PF09182.5 44 vkevlekeglGkletiaGaaGG 65
                +k +l  +  G+l+t  Ga+GG
  MMETSP1325-20131115|4559_1 59 IKALLVWKTRGTLHTADGAGGG 80
                6778888899***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 430.46
//
Query:       MMETSP1325-20131115|4560_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00063   18.8   0.0     0.0007   18.7   0.0    1.0  1  PF00069.20 Protein kinase domain
  ------ inclusion threshold ------
      0.034   13.5   0.0       0.19   11.1   0.0    1.9  2  PF03017.9  TNP1/EN/SPM transposase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0     1e-07    0.0007       6      52 ..       8      52 ..       3      61 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1e-07
                EEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHH CS
  PF00069.20  6 klGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkil 52
                 lG+G++G+++ka +  t + vAvK+l   +++++ +   ++Elk+l
  MMETSP1325-20131115|4560_1  8 PLGAGASGVCVKALHLPTMRLVAVKTLPIFDAHKRRQM--ISELKLL 52
                79****************************99997764..5798887 PP

>> PF03017.9  TNP1/EN/SPM transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.7e-05      0.19      32      51 ..       3      22 ..       1      28 [. 0.86
   2 ?    0.3   0.0     0.066   4.5e+02       9      34 ..      36      61 ..      30      67 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.7e-05
   PF03017.9 32 lvnriPLGpnaakVlVdvvl 51
                lv+ +PLG  a+ V+V+++ 
  MMETSP1325-20131115|4560_1  3 LVHVCPLGAGASGVCVKALH 22
                8***************9865 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.066
   PF03017.9  9 llDwkssddvVaegrvcssdpdelvn 34
                ++D  ++++++ e +++ ++ +++v 
  MMETSP1325-20131115|4560_1 36 IFDAHKRRQMISELKLLYQNMAAIVS 61
                78888999999999998888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 442.81
//
Query:       MMETSP1325-20131115|4555_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 640.77
//
Query:       MMETSP1325-20131115|4561_1  [L=536]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-64  215.7   0.0    1.1e-63  215.2   0.0    1.1  1  PF05577.7  Serine carboxypeptidase S28
    0.00011   22.0   2.1    0.00013   21.7   0.8    1.6  1  PF12697.2  Alpha/beta hydrolase family
    0.00031   19.9   0.2    0.00055   19.1   0.1    1.4  1  PF00326.16 Prolyl oligopeptidase family
     0.0029   17.0   0.1     0.0049   16.3   0.0    1.4  1  PF00561.15 alpha/beta hydrolase fold
     0.0045   16.6   0.6     0.0087   15.7   0.1    1.8  2  PF12695.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF05577.7  Serine carboxypeptidase S28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.2   0.0     4e-67   1.1e-63      11     432 ..      67     521 ..      64     522 .. 0.81

  Alignments for each domain:
  == domain 1    score: 215.2 bits;  conditional E-value: 4e-67
   PF05577.7  11 krtfqqryfvndqytkng.gpifLyiGgegsesassvrngeilklAkefgAlvlslEHRfYGqSkPvkdlsta...nlrylsseqalaDvasfikalk....qkfklsssskwivfGgSYsgsLaawaRkkyPelvvgavaSSaPllakvdfk..............eylevveeslaktag...ecakavekgfaeveellktkegrqalseelqlcskldek..tdkd.....ikkffs...niaaefqgvvqysydgkanaalsalsikelCkllsnasktdlilrvevliqlfkslnqkslnlstadisyqlavaekkdssgeladdrqWlyqtCtEfGfyqttds...eaqlfgskvpaslfidlCedvFgasanskkvklrvkatnsk.YGgadnysatnvvfvnGalDPWhalg..ltkstdssvvpllikgaahcaDmypasssdsaelkaaral 432
                 ++t+++ryf   +y+     pi++y+G+e++ +++  ++g +++ A  ++A++++ EHRfYGqS+P ++ ++a    ++ l++eqa+aD ++  +++k      +     s++i+fGgSY+g+L+aw+R kyP+   ga+++SaP+l + +                 y ++v+++ ++++g    c ++ + gf+ ++++   ++gr alse+++ c++++    +d d     ++ +f+     ++++  +  y +  +a ++l+ + ++++C++l +as       ++ l  l   +n  +l++s+ +++   ++ + +d+      d  W yq CtE+ +  t  s   ++ + + ++ ++  ++ C + +g+++  ++++ + ++   +   g     ++n+vf+nG++DPW+a g    + t+  +v++++ ++ah+ D++ a ++ds+++k +r+l
  MMETSP1325-20131115|4561_1  67 EDTWSMRYFTHTEYWGGPgHPIWFYTGNEANVEQYVNATGLMWEHAASHQAMLVFAEHRFYGQSWPCGGAENAqkdCIHLLTTEQAMADYVELLAQIKggssGAVPPTPTSPVIAFGGSYGGMLSAWIRMKYPASFNGAISASAPILGTPNTAldatgrgfyddggaTYWDIVQADTSEDKGaapACSANLDAGFDLIAKMSADEAGRAALSEAFSFCPDAHVLdeSDADgyrlgLWVLFAfddYAMGNYPFASTYLEGPDALSPLPPYPMRAACDYLADASLSTPEAETALLDGLAAAVN--LLYNSSGATECYSSIPARDDEL-----DGIWDYQWCTEMACQETYFSrraGSIWPEYTFNLTWVTERCQNKYGPHVFPRTTHVAEQYGGWAgLAG-PAATVSNIVFSNGEFDPWRAAGvnGLNVTERGIVSVIVADGAHHLDLMFATDEDSQSVKDVRKL 521
                 589*******999998755************************************************9988874335888*****************94322234556899***********************************8766555555588888999999**********99997666*********************************9887622344411111233332111233444445555566667899**************9988777344444444444444..5566666666555555555555.....789*********98777655555999**********************99988888888777764444.677889****************544688999****************************99985 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.8   4.9e-08   0.00013      25     130 ..     117     242 ..      82     324 .. 0.69

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 4.9e-08
                 SEEEEE-----------S...........S--HHHHHHHHHHHHHH--............--EEEE--------HHHHHH----.EEEEEEE------STT.---TTHHHHHHHHHH----....- CS
   PF12697.2  25 yrvvapDlpGhGrSdrppd........ydpdtledlaadlaalldalgl...........rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpas.alrpagpsllrrllagraaalrdl 130
                    v  + + +G+S ++ +            t e+  ad+++ll+++ +            pv+ +G S+Gg++++ +  ++p  + g +  ++p+  ++  al + g+ + ++  a +++  ++ 
  MMETSP1325-20131115|4561_1 117 AMLVFAEHRFYGQSWPCGGaenaqkdcIHLLTTEQAMADYVELLAQIKGgssgavpptptSPVIAFGGSYGGMLSAWIRMKYPASFNGAISASAPILGTPNtALDATGRGFYDDGGATYWDIVQAD 242
                 445556778888888777644433333223455888999*******9999******998889****************************888888444434444444555555555555554332 PP

>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1     2e-07   0.00055      64      96 ..     177     209 ..     150     241 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 2e-07
                 GGEEE--------HHHHHHHH-GGG---EEEE- CS
  PF00326.16  64 drlaitGgSyGGylvgaalnqrpdlFkaavaqv 96 
                 + ++++GgSyGG+l++++ ++ p  F +a++++
  MMETSP1325-20131115|4561_1 177 SPVIAFGGSYGGMLSAWIRMKYPASFNGAISAS 209
                 56899**********************999764 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.8e-06    0.0049      46      80 ..     179     243 ..     173     386 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.8e-06
                 EEEEE-B---HHHHHHHHHCGGGEEEEEEESB--..............................H CS
  PF00561.15  46 ltlvGhSmGGmialayaaeypdrvkamvllgtva..............................v 80 
                 ++++G+S+GGm++++   +yp+++ ++++ +++                                
  MMETSP1325-20131115|4561_1 179 VIAFGGSYGGMLSAWIRMKYPASFNGAISASAPIlgtpntaldatgrgfyddggatywdivqadT 243
                 899*************************9999877877777777777777555554444444440 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.5   6.8e+03      21      49 ..      19      47 ..      13      59 .. 0.71
   2 !   15.7   0.1   3.2e-06    0.0087       2      90 ..      88     210 ..      87     271 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 2.5
   PF12695.2 21 alakrgfavvavdlpghgasegaaaakrv 49
                alakr ++v +++ +  ++ + a++++r+
  MMETSP1325-20131115|4561_1 19 ALAKRPVRVSVPAARLASKPSTANCTERW 47
                68888888888888877776666666655 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 3.2e-06
   PF12695.2   2 vvlvhGaggdssay....eplaealakrgfavvavdlpghgas....egaa...............aakrvl......aadll..........dleriilvGhSlGGgvalelagrd.drvkglvllap 90 
                 + ++ G+ ++ ++y      ++e+ a++    v  +++++g+s       a               a    +       a+ +           ++++i +G S+GG++++++  ++ +++ g++  ++
  MMETSP1325-20131115|4561_1  88 IWFYTGNEANVEQYvnatGLMWEHAASHQAMLVFAEHRFYGQSwpcgG--AenaqkdcihlltteqA----MadyvelLAQIKggssgavpptPTSPVIAFGGSYGGMLSAWIRMKYpASFNGAISASA 210
                 5677888888877744323556788888999999999*****999651..33445556666644441....2444444144446667777899899****************99999999999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.88u 0.33s 00:00:01.21 Elapsed: 00:00:00.47
# Mc/sec: 2732.87
//
Query:       MMETSP1325-20131115|4563_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 327.67
//
Query:       MMETSP1325-20131115|4564_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|4565_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.62
# Mc/sec: 247.37
//
Query:       MMETSP1325-20131115|4566_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.072   13.1   2.4       0.14   12.2   0.6    2.4  2  PF00672.20 HAMP domain
       0.21   12.1   0.1       0.21   12.1   0.1    2.1  3  PF07704.6  Rv0623-like transcription factor


Domain annotation for each model (and alignments):
>> PF00672.20  HAMP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.4   9.7e+03      30      40 ..      66      76 ..      64      83 .. 0.73
   2 ?   12.2   0.6   2.1e-05      0.14       6      68 ..     197     271 ..     192     273 .. 0.71

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.4
                HHHHHHHHH-- CS
  PF00672.20 30 LaeaarriaeG 40
                ++eaa r+ eG
  MMETSP1325-20131115|4566_1 66 IEEAALRLKEG 76
                78899999988 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 2.1e-05
                 HHHHHHHHHHHHHHXHTTHHHHHHHHHHHHH.HH.-.......--TT....S...TTT..SS----HHHHCCCHHHHC CS
  PF00672.20   6 llalllalvlawllarrilrPlrrLaeaarr.ia.e.......Gdld....drv.pvd.grdEigeLarafnamlerL 68 
                 + ++++al++aw+++r++  + +r+++a+ + +a e       G           ++   + E+ ++ +a+n+++++ 
  MMETSP1325-20131115|4566_1 197 VSGWAVALAFAWRFMRTVWLSEQRIRDAMAEqLAtEaaqaegeG--LpkavR-EfTPFaDTPEVKAVFEALNETADEV 271
                 6789***********************98651563355555441..144431.2344446779999999999999876 PP

>> PF07704.6  Rv0623-like transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.2      0.81   5.5e+03      37      53 ..      52      66 ..      45      83 .. 0.42
   2 ?   12.1   0.1     3e-05      0.21       5      31 ..     221     247 ..     220     248 .. 0.96
   3 ?   -2.4   0.0       1.1   7.4e+03      27      38 ..     258     269 ..     254     282 .. 0.58

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.81
   PF07704.6 37 Lerrrrkkrlverlaai 53
                L    r++++ ++ + i
  MMETSP1325-20131115|4566_1 52 LR--ARADASCDQQRII 66
                32..2222223322222 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 3e-05
   PF07704.6   5 IKdpevdrLarelaaltgeskteAvre 31 
                 I+d  +++La+e a++ ge++ +Avre
  MMETSP1325-20131115|4566_1 221 IRDAMAEQLATEAAQAEGEGLPKAVRE 247
                 9************************96 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 1.1
   PF07704.6  27 eAvreAleerLe 38 
                 +Av eAl+e  +
  MMETSP1325-20131115|4566_1 258 KAVFEALNETAD 269
                 466666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.40s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1334.44
//
Query:       MMETSP1325-20131115|4569_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0063   16.5   0.3      0.037   14.0   0.1    2.2  2  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.031   13.4   0.6       0.14   11.4   0.2    2.2  2  PF00036.27 EF hand
      0.044   13.0   0.1       0.14   11.4   0.1    1.8  1  PF13202.1  EF hand
        1.1    7.4  10.4       0.57    8.2   6.0    1.4  2  PF01499.11 Herpesvirus UL25 family


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1   1.1e-05     0.037      25      63 ..      65      99 ..      58     101 .. 0.89
   2 ?   -0.2   0.0       0.3     1e+03      38      52 ..     209     223 ..     142     227 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.1e-05
   PF13499.1 25 llkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63
                +l+++g  ++  + +++    ++++D n+dG +sf E+l
  MMETSP1325-20131115|4569_1 65 FLQKHGKTRTGTQRKNE----LDDVDINNDGIISFLEYL 99
                78899988889999999....****************97 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.3
   PF13499.1  38 vrevldyifkelDkn 52 
                 v+  l++ ++++Dk 
  MMETSP1325-20131115|4569_1 209 VELTLQAAMRRADKR 223
                 445788888888886 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2     4e-05      0.14       7      23 ..      83      99 ..      79     101 .. 0.86
   2 ?   -1.5   0.0      0.54   1.8e+03       2      11 ..     213     222 ..     212     223 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4e-05
                HHHCTTTSSEBEHHHHH CS
  PF00036.27  7 kefDkDgdGkIsfeEfk 23
                + +D ++dG Isf E++
  MMETSP1325-20131115|4569_1 83 DDVDINNDGIISFLEYL 99
                789**********9975 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.54
                 HHHHHHHHCT CS
  PF00036.27   2 lkeaFkefDk 11 
                 l+ a++ +Dk
  MMETSP1325-20131115|4569_1 213 LQAAMRRADK 222
                 78999*9998 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   4.1e-05      0.14       5      21 ..      82      98 ..      79     104 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.1e-05
                HHHH--S----B-HHHH CS
   PF13202.1  5 FrafDlNgDGkIsreEL 21
                ++ +D N+DG Is+ E+
  MMETSP1325-20131115|4569_1 82 LDDVDINNDGIISFLEY 98
                6789**********997 PP

>> PF01499.11  Herpesvirus UL25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0      0.64   2.2e+03     422     436 ..      91     105 ..      57     112 .. 0.48
   2 ?    8.2   6.0   0.00017      0.57      22     119 ..     159     256 ..     144     260 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 0.64
  PF01499.11 422 srdnnfeFLvenYvv 436
                 + ++ +e+L+ +Y v
  MMETSP1325-20131115|4569_1  91 GIISFLEYLLLHYKV 105
                 445555555555533 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00017
  PF01499.11  22 aeesleetrerfalrlrkeaeevkleklkkralkaeLdnleaksqtrseeiearLreieaeleevadaldlletaaaaaeeadaaesdataaeaaage 119
                 a es++e+++  +++ ++ + ++ +  +k +a+++eL  +e +  t+ + +e  L+++ ++ ++   +++l+e++a+a+ e + a ++++a+ aa+++
  MMETSP1325-20131115|4569_1 159 AIESFTEAKKAREQKIKTLKAKADKGGVKGMAAQQELTIMESEDSTEINRVELTLQAAMRRADKRRGSQALNEQKAKAEAELKKAAEEKRAKLAAKRA 256
                 567888999999999999999999*********************************************99999999999999999988888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1294  (0.094646); expected 273.4 (0.02)
Passed bias filter:                      538  (0.0393505); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.57
# Mc/sec: 1082.49
//
Query:       MMETSP1325-20131115|4571_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 514.22
//
Query:       MMETSP1325-20131115|4570_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-53  178.9   0.3    3.7e-53  178.3   0.2    1.2  1  PF00833.13 Ribosomal S17


Domain annotation for each model (and alignments):
>> PF00833.13  Ribosomal S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.3   0.2   2.7e-57   3.7e-53       4     118 ..      28     142 ..      26     146 .. 0.97

  Alignments for each domain:
  == domain 1    score: 178.3 bits;  conditional E-value: 2.7e-57
                 ----HHHHHHHTTTSSS---S--STTTTTSTTTTTTSS--SS-GGGT---HHHHHHTT---------S----------------------------------------.------ CS
  PF00833.13   4 vrtktvKraarviiekyyskltldFqtnkkiveevaiipSkrLrnkiAGyvthlmkriqkgpvrgislklqeeererrddyvpekseldveaievdqetkemlkslgleeipnvk 118
                 vrtktvKr +r+i+ekyys+ltldF+tnk+iv+eva++pSkr+rnkiAG++thlmkri+ gpvrgislklqeeererr d+vpe s+l++e+ ++d+ tk+ml++l+++++p ++
  MMETSP1325-20131115|4570_1  28 VRTKTVKRHSRMIVEKYYSRLTLDFHTNKRIVDEVAVVPSKRMRNKIAGFTTHLMKRINAGPVRGISLKLQEEERERRLDFVPEISALEAEEFTIDPSTKDMLDELNFKDLPVNV 142
                 9************************************************************************************************************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.34s 00:00:00.89 Elapsed: 00:00:00.55
# Mc/sec: 1172.04
//
Query:       MMETSP1325-20131115|4562_1  [L=713]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   9.7e-122  405.8   1.6   1.4e-121  405.3   1.1    1.1  1  PF00456.16 Transketolase, thiamine diphosphate binding domain
    3.3e-33  114.5   0.0    7.5e-33  113.3   0.0    1.6  1  PF02779.19 Transketolase, pyrimidine binding domain
    1.8e-10   40.1   0.0    1.3e-06   27.4   0.0    2.5  2  PF13292.1  1-deoxy-D-xylulose-5-phosphate synthase
    7.4e-09   35.4   0.0    2.1e-08   34.0   0.0    1.9  1  PF02780.15 Transketolase, C-terminal domain
      1e-05   25.0   0.2    0.00016   21.1   0.1    2.7  1  PF02775.16 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
     0.0024   16.5   0.1     0.0047   15.5   0.1    1.4  1  PF00676.15 Dehydrogenase E1 component
  ------ inclusion threshold ------
      0.032   13.8   0.1      0.056   13.1   0.1    1.4  1  PF02811.14 PHP domain


Domain annotation for each model (and alignments):
>> PF00456.16  Transketolase, thiamine diphosphate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  405.3   1.1    7e-125  1.4e-121       4     331 ..      48     379 ..      45     380 .. 0.96

  Alignments for each domain:
  == domain 1    score: 405.3 bits;  conditional E-value: 7e-125
                 HHHHHHHHHHHHHHHHHT---HHHHHTTHHHHHHHHHTT-BB-TTBTT-TTS-EEEE-----HHHHHHHHHH---.--HHHHTTTTSTT-S------T....TTTT-.SS---------TTT...HHHHHHHHHHH----SS--S--EEEEE----TT---HHHHHHHHHHTT-TTEEEEEEE-S----S-GCCTT-CHHHHHHHH---EEEEEE----HHHHHHHHHHHCCST.TS-EEEEEE-------TTTTT-GGG------HHHHHHHHHH..HHT.TCHHHHHHHHHHHHCTT...HHHHHHHHHHHHHHHHSCCHHHHHHHHH--- CS
  PF00456.16   4 kavnaiRvlavdavekaksGHPgaplglaeiaevlfkktlkhnpkdpkwidrDRFvLSnGHaslllYallhltGydlsleelksfrqlgsktpGHPel....keaagvevttGpLGqGianavglalaekalaatynkpgfdivdhyvyvllgDgclmEGvssEaislagvlkLgkLialyDdNkisidgeteisftedvakrfeaygWhvievedgedveeiakAieeAkaek.dkPtlikvktviGfgspnkegkedvHGapLgedevaalkkklGfdeksfeipqevydaikekeaegakaeeeWeellaaykkaapeeaaelerrlnge 331
                 +a+n  R la+d++++aksGH g plg+aei +vl+ + +++np++pkw++rDRFvLS+GH+s++lY+ lh++Gyd++++e+k+frq++s+tpGHPe+    ++++g+e ttGpLG Gi+navgla  ek+ aat+n ++++i+dh+vy+l+gDgcl+EGvs Ea+s+a++ kL++Li l+D+N++++d  +e + +ed akrf+aygW+vi+ +dg+d+++i++AieeAk+++  kPt+i++kt+iG+g+ +++g++++HG++   + v+ +++ lG+ +++ ++ ++ y+ +kek+a ++++ +eW+++++a+k+a pe+a  l++ lng+
  MMETSP1325-20131115|4562_1  48 TAANEARGLAMDSIAAAKSGHLGLPLGAAEIGAVLWGQSMMYNPEEPKWCNRDRFVLSAGHGSMFLYSWLHMAGYDIPMDEVKNFRQWHSATPGHPEFpnseHTTPGIEATTGPLGAGISNAVGLAASEKMAAATFNTEEHTIFDHHVYALCGDGCLQEGVSAEAMSFAAHEKLDNLILLFDSNDVTLDKMAEFTQSEDHAKRFDAYGWDVITLTDGHDLKAINEAIEEAKSNNnGKPTAIICKTIIGKGIDEVAGTNAAHGEAGV-EFVDGARESLGLPAEKWHVSDDTYAFMKEKQAANKAVYDEWTKTFEAWKEANPEKATILDDALNGK 379
                 6899*********************************************************************************************844434579*****************************************************************************************************************************87527***************************955.55*******************************************************999999886 PP

>> PF02779.19  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.3   0.0   3.8e-36   7.5e-33       6     175 ..     400     577 ..     395     579 .. 0.89

  Alignments for each domain:
  == domain 1    score: 113.3 bits;  conditional E-value: 3.8e-36
                 HHHHHHHHHHHHCC-TTEEEEESS-HHHHTTHHHHHHEGG-......-EGEEE--S-HHHHHHHH---TTCGTSEEEEEECEHHHHG..HHGGHHHHHHHHHHTT---E.EEEEEE--------TSS-SSHHHHHCTSTT-EEE--SSHHHHHHHHHHHHH......-.S-..-EEEEE-SSEE CS
  PF02779.19   6 rkaeaealaellkedpevvllgaDvargtfsvrkgllhdqg......egrvidsgisEqamlgfavGaalagpllviweaqfgdFangAqiyadqairsgeakgklpvg.vvtrlpigvgedGpehqsaeleaflrlipglkvvrPsdpaetkgllrraie......r.edrkPvvlrlpkqll 175
                 r+  +  ++ + ++ p+ v ++aD+ +++   +kg  ++ +      +g+++ +gi+E++m g+++G+a+ g  +++ +a+f++Fa+    y+++ +r  +a+ +lpv  ++t+++igvgedGp+hq++e+++ lr  p++ v+rP+d +et++++  +i+      + ++ +Pv l+l++q++
  MMETSP1325-20131115|4562_1 400 RASGSSIINYISEALPTYVSGSADLHGSNKNYIKGAGDFGSgfgksySGKNFYYGIREHGMGGIMNGIAYGG-IFTPSGATFLVFAD----YMRATMR-IAALAELPVSyILTHDSIGVGEDGPTHQPVETVSGLRVFPNMDVMRPADYEETAAAYAYSITkgmacgTvQTTGPVSLILTRQNV 577
                 555566677788899999*********************99*******************************.7*************....*******.*********************************************************9999722222223456677777777765 PP

>> PF13292.1  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   6.6e-10   1.3e-06      16     175 ..      44     235 ..      35     244 .. 0.75
   2 !   11.0   0.0   6.9e-05      0.13     219     262 ..     238     282 ..     233     292 .. 0.76

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 6.6e-10
   PF13292.1  16 eelkelaeeirefliekvs.ktggHlgsnLgvvEltvalh...yvfdspk......DklvwDvgHQa...YvhKiLtgRk...ekfetlrqkgg.lsgfpkreEseyDa....fevgHsstsisaalGlakardlkge..........kekvvaviGDgaltgGmafealnnagelkkklivilNd.Nemsi 175
                 + l + a+e r   +++++ +++gHlg  Lg+ E+   l     +++ ++      D++v   gH +   Y +  ++g     +++++ rq +    g+p+   se+ +     ++g  ++ is a+Gla++++++            +++v a+ GDg l  G++ ea+  a+++k + +++l d N+ + 
  MMETSP1325-20131115|4562_1  44 SALATAANEARGLAMDSIAaAKSGHLGLPLGAAEIGAVLWgqsMMYNPEEpkwcnrDRFVLSAGHGSmflYSWLHMAGYDipmDEVKNFRQWHSaTPGHPEFPNSEHTTpgieATTGPLGAGISNAVGLAASEKMAAAtfnteehtifDHHVYALCGDGCLQEGVSAEAMSFAAHEKLDNLILLFDsNDVTL 235
                 67888999999999998851689***********9988753335777532224444*********876668888899986333666777776651459999999*9998332245677899**********999887667778888888************************9988665555555165544 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 6.9e-05
   PF13292.1 219 leeslkel.vpnlfeelglkyigpidGhdleelikvleevkklkg 262
                 + e +++  + + f+++g + i  +dGhdl+++ +++ee+k+ ++
  MMETSP1325-20131115|4562_1 238 MAEFTQSEdHAKRFDAYGWDVITLTDGHDLKAINEAIEEAKSNNN 282
                 4444444434489***************************98643 PP

>> PF02780.15  Transketolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.1e-11   2.1e-08      11     107 ..     607     695 ..     596     708 .. 0.77

  Alignments for each domain:
  == domain 1    score: 34.0 bits;  conditional E-value: 1.1e-11
                 CEEEEEESTHHHHHHHHHHHHHTTT-EEEEEEESEEESSBHHHHHHHHHHHSCEEEEESSEC.EEEEHCHHHHHHHH.HSGGG-SSEEEEEEEESSSHH CS
  PF02780.15  11 dvtivayGsmveealeAaeeLakegisaevidlrtvkPlDeetidesvkktgrlvvveeavk.igGigaevaaalae.egftkldapvrrvggpdvpip 107
                 + +i+a Gs+v++a +Aa+eL k    ++v+++ +++++D     + + ++++  +++  ++ +++++a+v+ ++++  g++ + ++v+r+g  ++p +
  MMETSP1325-20131115|4562_1 607 EQIIIAAGSEVQFAEAAAKELGKG---VRVVSMPCMSLFD-----K-QSAEYKEEILPSSCTnRVAMEAGVSGLWYKyVGLEGKVVGVDRFGF-SAPGD 695
                 5589******************64...8888777777777.....4.5556666666666666****************************98.88877 PP

>> PF02775.16  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.1   8.1e-08   0.00016      24     152 ..     156     289 ..     138     290 .. 0.72

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 8.1e-08
                 --SS-----HHCCCHHHCC.....T.......ST..TS-EEEEE----TTTT..GGGHHHHHHCT--EEEEEEE-SB---HHHHHHHH-SS--GGGCB..-----HHHHHCC---EEE.EESSH..HHHHHHHHHHH..CSSS-EEEE CS
  PF02775.16  24 sgglgtmGyglpaAiGakl.....a.......kp..drevvaivGDGgflmi..lqelatavrrnlpitvvvlnNegygmtggqqepfggkrksgpdgkklkpvdfaklaealGakga.rvekadveeleealkeal..ekkgpalie 152
                 ++++g +G g++ A+G ++     a       +   d +v+a++GDG+++     ++++ a+ ++l+ ++++++ +   + ++         +++       + d+ak   a+G +++   + +d++ ++ea++ea   ++++p+ i 
  MMETSP1325-20131115|4562_1 156 EATTGPLGAGISNAVGLAAsekmaAatfnteeHTifDHHVYALCGDGCLQEGvsAEAMSFAAHEKLDNLILLFDSNDVTLDKM--AE-----FTQ------SE-DHAKRFDAYGWDVItLTDGHDLKAINEAIEEAKsnNNGKPTAII 289
                 6799**************98877615666654224579***********9876356677788888899999999666533332..22.....222......22.78899999999988444567889999999999988778888775 PP

>> PF00676.15  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   2.4e-06    0.0047      99     210 ..     158     280 ..     132     292 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2.4e-06
                 --S--SHHTTHHH--HHHHH..........H------EEEEE----TTSHHHHHHHHHHHHCT--E.EEEEEE-SEETTECGGHC-S-S-CGGGGGG---EEEEE.----HHHHHHHHHHHHHH CS
  PF00676.15  99 gngivgaqvplvaGialaak..........yegkkevailliGDGatnqGqffealnlAalwklpv.ifvveNNqyaisteaerssaskelakkargvgipgirV.dGnDvlAvyqAvkeAaer 210
                   g++ga+ + + G+a   k              ++ + +l+GDG   +G  +ea+ +Aa  kl   i+    N   +  + ++ ++s++ ak+  ++g   i+  dG D+ A+ +A++eA+  
  MMETSP1325-20131115|4562_1 158 TTGPLGAGISNAVGLAASEKmaaatfnteeHTIFDHHVYALCGDGCLQEGVSAEAMSFAAHEKLDNlILLFDSNDVTLD-KMAEFTQSEDHAKRFDAYGWDVITLtDGHDLKAINEAIEEAKSN 280
                 56677777666667777777777766532222224456799***********************8769******98765.55667889999999999999888754***************964 PP

>> PF02811.14  PHP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   2.9e-05     0.056      19      61 ..     245     295 ..     241     424 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHH----EEE---E-TTTCGGHCHHHHHH.........--.EEE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxx RF
  PF02811.14  19 eelvkqakelgveaialTDHdnvagapefyeaakk.........agikpiiG 61 
                 e+ +k+  ++g+++i+lTD +++ ++ e+ e+ak            +k iiG
  MMETSP1325-20131115|4562_1 245 EDHAKRFDAYGWDVITLTDGHDLKAINEAIEEAKSnnngkptaiI-CKTIIG 295
                 8999******************************97766444320.555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.13u 0.33s 00:00:01.46 Elapsed: 00:00:00.65
# Mc/sec: 2628.62
//
Query:       MMETSP1325-20131115|4575_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|4568_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.091   11.9   0.0       0.15   11.3   0.0    1.3  1  PF00240.18 Ubiquitin family


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.1e-05      0.15      14      59 ..     115     161 ..     111     170 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.1e-05
                 TTSBHHHHHHHHHHHHTS-GGGEEEEE---BE.TTTSBTTTTTT-TT CS
  PF00240.18  14 psdtvselKekieekegipvdqqrLiysGkvL.eDdrtlseyniqdg 59 
                 p++t  +l ++++++++     + ++y+Gk++ +  +tl+e +++++
  MMETSP1325-20131115|4568_1 115 PDETLWQLEARLANRYDRIKTGIEFVYKGKIIkDKTTTLREIGVKPE 161
                 5666667777777777777778899*******444568999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.31s 00:00:00.78 Elapsed: 00:00:00.70
# Mc/sec: 691.52
//
Query:       MMETSP1325-20131115|4577_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.65
# Mc/sec: 206.46
//
Query:       MMETSP1325-20131115|4578_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.26   11.2   2.9       0.31   11.0   1.3    1.7  1  PF11808.3 Domain of unknown function (DUF3329)


Domain annotation for each model (and alignments):
>> PF11808.3  Domain of unknown function (DUF3329)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.3   2.3e-05      0.31       7      49 ..      78     120 ..      73     145 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 2.3e-05
   PF11808.3   7 kllrrLlllllaalllGlligelawvlllallallvwhlrqll 49 
                 ++++ L+ + ++++++G+++ +++ +  l++l++l wh r+l 
  MMETSP1325-20131115|4578_1  78 EHVSALVEVRVPVVIVGAVVLAILIAQHLGVLLVLPWHARKLG 120
                 678899999******************************9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 866.38
//
Query:       MMETSP1325-20131115|4584_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.60
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|4583_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-19   70.0   2.6    2.7e-11   43.4   0.1    2.1  2  PF05608.7 Protein of unknown function (DUF778)
  ------ inclusion threshold ------
       0.16   12.1   0.8       0.21   11.7   0.5    1.3  1  PF03150.9 Di-haem cytochrome c peroxidase


Domain annotation for each model (and alignments):
>> PF05608.7  Protein of unknown function (DUF778)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.1   3.9e-15   2.7e-11       6      48 ..      24      66 ..      21      72 .. 0.93
   2 !   27.3   0.1   3.6e-10   2.4e-06      77     109 ..      74     106 ..      67     132 .. 0.85

  Alignments for each domain:
  == domain 1    score: 43.4 bits;  conditional E-value: 3.9e-15
   PF05608.7  6 wlfPlvGHvgisnseGsiydFegsyyvsaddmafgspvriwdl 48
                +l+PlvGH+gi +seG i+dF+g+y ++ d++++g++ r+  +
  MMETSP1325-20131115|4583_1 24 MLLPLVGHMGIGDSEGKIHDFNGPYSIGIDHFMVGTVWRYAVI 66
                699**********************************999765 PP

  == domain 2    score: 27.3 bits;  conditional E-value: 3.6e-10
   PF05608.7  77 efydralnatireFksadyslfsnnshsfvafv 109
                 + +d+a+++t+++++++ +++++nn+h++ a +
  MMETSP1325-20131115|4583_1  74 SGWDAAIRETDQSYQKQFHNICCNNCHHHTADA 106
                 67***************************9987 PP

>> PF03150.9  Di-haem cytochrome c peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.5   3.1e-05      0.21      21      46 ..      92     117 ..      71     132 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.1e-05
                 S---HHHHS-GGGTSS---------- CS
   PF03150.9  21 gnisCasCHspslgftdglsvskGad 46 
                 +ni C+ CH+ ++  +dg++ s+G+ 
  MMETSP1325-20131115|4583_1  92 HNICCNNCHHHTADAADGKRSSTGTR 117
                 689**************999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.64
# Mc/sec: 520.46
//
Query:       MMETSP1325-20131115|4581_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-46  159.2   0.0    1.5e-46  158.7   0.0    1.2  1  PF00459.20 Inositol monophosphatase family
    0.00038   19.2   0.0    0.00072   18.3   0.0    1.4  2  PF00316.15 Fructose-1-6-bisphosphatase


Domain annotation for each model (and alignments):
>> PF00459.20  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.7   0.0   2.2e-50   1.5e-46       9     250 ..      23     278 ..      17     297 .. 0.81

  Alignments for each domain:
  == domain 1    score: 158.7 bits;  conditional E-value: 2.2e-50
                 HHHHHHHHHHHHHHHCC.-HCCHSEEEH..-HHHHHHHHHHHHHHHHHHHHHHSTTSEEEHCHHHHC--B...---.EEEEEEEEE--HHHH------EEEEEEEETTEEEEEEEEETTTTE..EEE-------EEE-...........EEEE----S...-GGG-CCBEE--SSSSSCHHHCCCHHHHCCHHCCHEEEBE-SHHHHHHHHH----SEEEEEEEEBHHHH----HHHHH---EEEECSS-.....S.CSS-EEE CS
  PF00459.20   9 avelaakagevlreafs.nslvveekeksgeedlvtaadkaveelilealaakfpgdkilgeetlaagekselgesgltwvvDPiDGTknFirgipqfavsiglleegkpvlGviaaPllnq..lysaakgkGaflng...........qklkvsrap...ptseallatlfavssvkdtseaellekvlsavsspgvrrvgssalklalvAeGkadayiefgrekkWDhaAGvaiveeaGGvvtdlkge.....gltllkkgv 250
                 a ela++ag +++e ++ ++++ + k  + +  ++t ad a++e+i+e l++++p+++i++ee+ a     e+++++ +w+vDP+DGTk+Fi+++  f+v+igl e+ kpv+G++++P+l+   +y+++      + +             +k++  +   ++++ l++ +++++s++ t +  +++k+   ++++   + gss lk ++vAeG+a++y ++g++ +WD++A++aive  GG+v+  +       +l ++k +v
  MMETSP1325-20131115|4581_1  23 AAELAKQAGAKIMEIYNsDDFAEKIKDPKADGSPLTMADLAANEIICEGLKKLYPTIPIISEENKAVPY-EERKDWKCFWCVDPLDGTKEFINRNGEFTVNIGLCEDNKPVAGIVYCPALDPpvIYKGVTSSPPAIREncddlgggmgyDSFKAVFPKvfdEADSGLTFVASKSHSNEATDK--FIAKYK--NPKT--ISKGSS-LKFLMVAEGSAHIYPRMGPTSEWDTCAAQAIVECGGGKVVKDTPAgfngpSLEYNKESV 278
                 6799************99999999999667777******************************999888.8888888*****************************************9774447777777655555545555556665334444444556789999999888888888888..888884..5555..567776.**************************************997666545555555555554 PP

>> PF00316.15  Fructose-1-6-bisphosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   1.1e-07   0.00072      55     113 ..      52     109 ..      10     121 .. 0.84
   2 ?   -3.8   0.0      0.58     4e+03     207     226 ..     195     214 ..     193     224 .. 0.76

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 1.1e-07
  PF00316.15  55 vtGdeqkklDvladdilieaLkaseavkvlaSEEeeelvvlegekegkyavaiDPlDGS 113
                 ++G      D+ a++i+ e Lk+   +  ++SEE++++    ++k  k   ++DPlDG 
  MMETSP1325-20131115|4581_1  52 ADGSPLTMADLAANEIICEGLKKLYPTIPIISEENKAVPYE-ERKDWKCFWCVDPLDGT 109
                 566667778*************************9877665.679999999*******7 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 0.58
  PF00316.15 207 rkwdkavrkyidklkeekeg 226
                  + ++a+ k+i+k+k++k  
  MMETSP1325-20131115|4581_1 195 SHSNEATDKFIAKYKNPKTI 214
                 57789999999999997754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       566  (0.0413985); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1442.09
//
Query:       MMETSP1325-20131115|4586_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 705.59
//
Query:       MMETSP1325-20131115|4587_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 850.47
//
Query:       MMETSP1325-20131115|4589_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-22   78.6   6.7    1.1e-12   47.3   0.4    3.7  4  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.8e-10   2.4e-06      46      91 ..       2      47 ..       1      52 [. 0.91
   2 !   47.3   0.4     8e-17   1.1e-12       6      91 ..      57     137 ..      54     142 .. 0.91
   3 !    5.9   0.1   0.00068       9.3       3      25 ..     142     164 ..     140     167 .. 0.89
   4 ?    0.3   0.0     0.038   5.2e+02      73      92 ..     165     184 ..     162     186 .] 0.87

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 1.8e-10
                --HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22 46 gildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkl 91
                ++l++l++++ ++G++glyrGll  l+ +vp +a+kf++  ++k  
  MMETSP1325-20131115|4589_1  2 SVLGTLREVVGKHGVLGLYRGLLSPLVSEVPRRALKFGANGFYKAR 47
                57899*********************************99998875 PP

  == domain 2    score: 47.3 bits;  conditional E-value: 8e-17
                 HHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH--.-GGGG---HHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   6 lksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeG.irglyrGllpnllrvvpaaaikfvtyetlkkl 91 
                 l+++++Ga+Aga ++lv tP ++vK+ +q      +  +++   a+k+++  +G +rglyrG+++ + r+++ +++ f++  + k++
  MMETSP1325-20131115|4589_1  57 LANVMCGAAAGASETLVHTPAERVKILVQ------GGTFSSPTAAVKELVVADGaVRGLYRGMGAYMARQAVWNGAFFGCLGAGKEI 137
                 6789*************************......88999999*****99888846***********************98887775 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.00068
                 HHHHHHHH----HHHCCHHHCHH CS
  PF00153.22   3 lsvlksllaGaiAgaiaalvttP 25 
                 +++  ++++G+++g++a+++ +P
  MMETSP1325-20131115|4589_1 142 PNFGTNFAIGMASGCFATVMNNP 164
                 678999**************998 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.038
                 HHHHHHHHHHHHHHHHHHHH CS
  PF00153.22  73 rvvpaaaikfvtyetlkkll 92 
                 r++p +++  ++ye++ + l
  MMETSP1325-20131115|4589_1 165 RSAPGHGLLVMSYEYFEQAL 184
                 7899***********98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 781.97
//
Query:       MMETSP1325-20131115|4591_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 484.06
//
Query:       MMETSP1325-20131115|4598_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 733.88
//
Query:       MMETSP1325-20131115|4601_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                       71  (0.0051931); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|4599_1  [L=391]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-11   44.7  12.3    1.2e-11   44.7   8.5    2.3  2  PF01694.17 Rhomboid family


Domain annotation for each model (and alignments):
>> PF01694.17  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   8.5   8.8e-16   1.2e-11      12     144 ..       2     154 ..       1     156 [. 0.71
   2 ?   -1.0   1.5       0.1   1.4e+03      69      99 ..     271     320 ..     240     350 .. 0.50

  Alignments for each domain:
  == domain 1    score: 44.7 bits;  conditional E-value: 8.8e-16
                 HGGG--S.HHHHHHHHHHHHH----HHHH---HHHHHHH...HHHHHH---HHHHH----..........-------HHHH---CCCHHHCCTTS.............--------HCCCCCHHH.........----S---HH-------HHHHHHHHH CS
  PF01694.17  12 tsmflHagvlHllfNmlallvfGiplerelGsvrflllY...llsglagsllsslfspags........plvGaSgaifgllgallvllllnrkqlra........ipaallllliiiainlllgf........lpgidnfaHlgGfivGlllgflllkr 144
                 t+ + H +v+HllfNm++l+ +G +le ++G++ +l ++   l+  +a++++ + +             p+vG S+++f+++ +l++ +++    +                l+++ +a+n++ +f        +p +++++H +G++ G+ l++ ll++
  MMETSP1325-20131115|4599_1   2 TASLAHYDVMHLLFNMMSLYNLG-ELELVFGTFAYLYYTcdlLVLTIAAAIAIYHVLITRFhqeryvsqPSVGYSCVLFAWMTVLCIRVPRYC-AFNIeylcfdtyH-----LPVLGTAFNFAPVFlvfatsfiMPRASMVGHGAGIVLGYPLAWGLLSW 154
                 78899*****************9.69******9999887333344444544444333333355777************************983.3333578566662.....444444444443332112244578888888************999875 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.1
                 ...............-------HHHH---CCCHHHCCTTS.......... CS
  PF01694.17  69 s.............plvGaSgaifgllgallvllllnrkqlra......i 99 
                               +++   + ++++ +a lv +  +++ lr        
  MMETSP1325-20131115|4599_1 271 GiiapksssplaltFSASFGCMMAAYHAATLVAIAARYELLRGsgltsqT 320
                 03333333665544444444555555555555555555555545554442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.35s 00:00:01.08 Elapsed: 00:00:00.51
# Mc/sec: 1837.21
//
Query:       MMETSP1325-20131115|4604_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-41  142.3   0.0    2.1e-41  142.1   0.0    1.0  1  PF08540.5 Hydroxymethylglutaryl-coenzyme A synthase C terminal


Domain annotation for each model (and alignments):
>> PF08540.5  Hydroxymethylglutaryl-coenzyme A synthase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.1   0.0   1.5e-45   2.1e-41     118     279 ..       2     164 .]       1     164 [] 0.93

  Alignments for each domain:
  == domain 1    score: 142.1 bits;  conditional E-value: 1.5e-45
                 -GGGGGT-HHHHHHHHHHHHHHHHHHTGGGGHHHHH----GGGS----HHHHHHHS-HHHH---EE-EEE-----EEEEEEEEE-S------H.HHHHHHTTTTHHHHHHTSEEE-HHHHHHHHHHHHHHTT--SB-----GGGS----EEEEEE-TTS-EEE CS
   PF08540.5 118 kledsytdrdlekallelskelfkkkvkpslllpkqvGnmYtaslyaalasllsskkadelagkrvllfsYGsGlaaslfslkvkqdasaksi.ldkliakvldlkkkldsRkkvsPeefeealelrekahlkkefkpkgsidsLfpgtyyLeevDdlyRRsY 279
                 ++e+s+ +r+l++a+  l++  f   v p+ +l+k++Gn Yt +++  l+sl++ +++del gkrv++fsYGsG  a+l+s++ +  ++ +++ +   ia+++ ++ +ld+R + +Peef+ea+ +re+a+ k++ +p g +d+++ g+yyLe +D+++RR+Y
  MMETSP1325-20131115|4604_1   2 TYEKSLESRELDAAFRPLAAAGFASAVGPTSFLSKNIGNCYTGAVFFNLLSLVNDVSEDELIGKRVGMFSYGSGSVATLYSIRPRVPTADGAAfTLGRIAQTTAMRVRLDTRAECTPEEFAEAMGMREQAYDKAPHTPVGPTDHMAAGVYYLEGIDEQHRRTY 164
                 799*******************************************************************************866544444330233599999***********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 770.59
//
Query:       MMETSP1325-20131115|4605_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 367.44
//
Query:       MMETSP1325-20131115|4608_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|4606_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1254.26
//
Query:       MMETSP1325-20131115|4597_1  [L=502]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.07u 0.34s 00:00:01.41 Elapsed: 00:00:01.05
# Mc/sec: 1145.69
//
Query:       MMETSP1325-20131115|4611_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 343.01
//
Query:       MMETSP1325-20131115|4612_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.68
# Mc/sec: 877.49
//
Query:       MMETSP1325-20131115|4616_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|4618_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 402.59
//
Query:       MMETSP1325-20131115|4619_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-22   79.4   0.2    1.9e-22   79.3   0.2    1.0  1  PF01055.21 Glycosyl hydrolases family 31


Domain annotation for each model (and alignments):
>> PF01055.21  Glycosyl hydrolases family 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   0.2   1.4e-26   1.9e-22     299     369 ..       1      70 []       1      70 [] 0.99

  Alignments for each domain:
  == domain 1    score: 79.3 bits;  conditional E-value: 1.4e-26
                 HHHHHH----SSSEEE----S-..SSGGGT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----SSBEHH CS
  PF01055.21 299 liRwmqlgaFlPffRnHnekktrkqepwafgeeveeaarkalelRyrllpylytlmyeaaetglpvvrplf 369
                 ++Rw+++gaF+Pf+RnHn++++ +qe+++++ +v+eaar al lRy+llp++yt +y+a ++ + vvrpl+
  MMETSP1325-20131115|4619_1   1 CARWIEVGAFHPFSRNHNTIGAMPQELYRWD-TVAEAARSALGLRYQLLPVMYTSFYNAQSEAELVVRPLW 70 
                 89*****************************.999**********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|4622_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-11   41.6  11.3      1e-07   31.1   0.1    3.0  3  PF00654.15 Voltage gated chloride channel


Domain annotation for each model (and alignments):
>> PF00654.15  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.7     0.037     5e+02     135     143 ..      29      37 ..      13      87 .. 0.47
   2 !   16.8   0.3   1.7e-07    0.0023      56      98 ..     111     153 ..      87     155 .. 0.91
   3 !   31.1   0.1   7.6e-12     1e-07      93     143 ..     180     232 ..     179     257 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.037
                 HHHHHHHHH CS
  PF00654.15 135 vaalvlrll 143
                 ++a v +ll
  MMETSP1325-20131115|4622_1  29 CGATVGTLL 37 
                 222222222 PP

  == domain 2    score: 16.8 bits;  conditional E-value: 1.7e-07
                 --------TTT-------HHHHHTT.---HHHHHHHH------ CS
  PF00654.15  56 lslGreGplvqiGAavgsglsrllklsrndrrrrlvaaGaAAG 98 
                 +++G e+plv iG+  +  l  + kl+++++rr+  ++G +AG
  MMETSP1325-20131115|4622_1 111 GCAGPEAPLVAIGGGTAGKLMAWIKLKDEHERRIGTICGLGAG 153
                 799**********************998886666********9 PP

  == domain 3    score: 31.1 bits;  conditional E-value: 7.6e-12
                 -------HHHHT-ST---TTTTTTTS-TT.--.TTHHHHH---HHHHHHHHHH CS
  PF00654.15  93 aGaAAGlAaaFnaPlgGvlfalEelsrdl.sl.rallpvlvaslvaalvlrll 143
                 +  + GlAa F+ PlgG+lf +E+++r   ++ +al+p++va ++ + v+r l
  MMETSP1325-20131115|4622_1 180 CTGGTGLAAFFGEPLGGALFGCEVIHRYGiEYfEALIPSVVAGITCNSVFRYL 232
                 56799*******************98322233677777777777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.47
# Mc/sec: 1509.20
//
Query:       MMETSP1325-20131115|4623_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.038   13.4   0.4      0.038   13.4   0.3    1.0  1  PF03482.8 sic protein


Domain annotation for each model (and alignments):
>> PF03482.8  sic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3   2.8e-06     0.038      87     138 ..       6      57 ..       1      72 [. 0.85

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.8e-06
   PF03482.8  87 gtgyekrddwggpgtvatdpytppyggalgtgyekrddwggpgtvatdpytp 138
                  t    r     pgt  tdp++   ++a  t    r     pgt  tdp++ 
  MMETSP1325-20131115|4623_1   6 PTTKPARSPQFDPGTFETDPFAADTADAARTTKPARSPQFDPGTYQTDPFAA 57 
                 556666777778*************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 357.28
//
Query:       MMETSP1325-20131115|4625_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 213.49
//
Query:       MMETSP1325-20131115|4615_1  [L=431]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.63    7.6   6.1       0.85    7.1   4.2    1.1  1  PF05086.7  Dictyostelium (Slime Mold) REP protein
          9    3.8  12.0         13    3.2   8.3    1.1  1  PF04931.8  DNA polymerase phi


Domain annotation for each model (and alignments):
>> PF05086.7  Dictyostelium (Slime Mold) REP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   4.2   0.00012      0.85     871     907 ..     177     211 ..     171     214 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00012
   PF05086.7 871 lnklteleeylisefseaeddkedededededEdede 907
                 + +lt+++  +++  se +d++edededededEd  +
  MMETSP1325-20131115|4615_1 177 MSELTDVDGWVCEGESEDGDEDEDEDEDEDEDED--D 211
                 6789999999999876666655555555555554..3 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   8.3    0.0019        13     672     694 ..     189     211 ..     184     223 .. 0.74

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.0019
   PF04931.8 672 eseseddsEdgeedEkedddeav 694
                 e esed +Ed++edE+ed+de+ 
  MMETSP1325-20131115|4615_1 189 EGESEDGDEDEDEDEDEDEDEDD 211
                 55777777777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.28s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1844.34
//
Query:       MMETSP1325-20131115|4626_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.75    9.5   0.1       0.75    9.5   0.0    2.2  2  PF03789.8 ELK domain


Domain annotation for each model (and alignments):
>> PF03789.8  ELK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   1.5      0.68   9.3e+03       9      13 ..      61      65 ..      61      65 .. 0.91
   2 ?    9.5   0.0   5.5e-05      0.75       6      14 ..      88      96 ..      88      97 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.68
   PF03789.8  9 KYsgy 13
                +Y+gy
  MMETSP1325-20131115|4626_1 61 GYGGY 65
                7***9 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 5.5e-05
   PF03789.8  6 LlrKYsgyL 14
                L++KY+gy 
  MMETSP1325-20131115|4626_1 88 LMQKYGGYV 96
                9*******5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 731.30
//
Query:       MMETSP1325-20131115|4627_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.043   13.8   0.2      0.052   13.6   0.1    1.1  1  PF04626.8  Dec-1 protein, C terminal region
      0.061   12.3   3.9      0.064   12.2   2.7    1.0  1  PF11067.3  Protein of unknown function (DUF2868)
      0.065   13.2   0.2      0.081   12.9   0.1    1.3  1  PF01141.13 Gag polyprotein, inner coat protein p12
       0.71   10.2   3.7       0.91    9.8   2.6    1.2  1  PF14357.1  Domain of unknown function (DUF4404)


Domain annotation for each model (and alignments):
>> PF04626.8  Dec-1 protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.5e-05     0.052      10      68 ..      22      80 ..      14      85 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.5e-05
   PF04626.8 10 edednkaeddlvgeagpqmpenegtarhkvdalgvggnkrkksksksapptvinyyyaa 68
                 ded +a+   +    p m e  g+ar + da  v   k    +s  a   v     aa
  MMETSP1325-20131115|4627_1 22 LDEDTNADAVRLEVQLPSMRERAGAAREHQDAEQVAAAKEAADRSEVASRLVAAVEMAA 80
                5899999888888899****************************999998887776666 PP

>> PF11067.3  Protein of unknown function (DUF2868)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.7   1.9e-05     0.064     152     227 ..       2      83 ..       1      87 [] 0.76

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.9e-05
   PF11067.3 152 rlrralarlrldlslpyyqrLlqrlqppsvelgvkdadeaaapkaeaaaaraeese......prsqleqallaalelddawp 227
                 r +r+++++++ ++l+ +qrL +  + ++v+l v+ ++    + a+ +++ ae+        +rs++ ++l+aa+e++++++
  MMETSP1325-20131115|4627_1   2 RCTRKHEAVPSETELAKAQRLDEDTNADAVRLEVQLPSMRERAGAAREHQDAEQVAaakeaaDRSEVASRLVAAVEMAASEL 83 
                 678999999************************955554444444444343333334688999999**********998855 PP

>> PF01141.13  Gag polyprotein, inner coat protein p12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.4e-05     0.081      29      76 ..      34      80 ..       7      86 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.4e-05
  PF01141.13 29 tedpPPYrepepsppageedeeeaattsevpepsPmasrlrgrrepPa 76
                  ++P  re  + ++++++d e++a+++e+++ s +asrl    e  a
  MMETSP1325-20131115|4627_1 34 EVQLPSMRER-AGAAREHQDAEQVAAAKEAADRSEVASRLVAAVEMAA 80
                4567777777.56667779999******************87766555 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.6   0.00027      0.91      11      63 ..      14      67 ..      13      82 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00027
   PF14357.1 11 eeLeqtdsldeetraeLkelrddieealee.edaseaedeslaerlneaverFe 63
                +eL++ + lde+t a+  +l+ ++ ++ e+  +a+e++d++ +   +ea++r e
  MMETSP1325-20131115|4627_1 14 TELAKAQRLDEDTNADAVRLEVQLPSMRERaGAAREHQDAEQVAAAKEAADRSE 67
                79************************9999889999999999999998888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       585  (0.0427882); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.65
# Mc/sec: 320.74
//
Query:       MMETSP1325-20131115|4624_1  [L=368]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-54  183.1   0.0    5.6e-54  182.9   0.0    1.1  1  PF00069.20 Protein kinase domain
    2.1e-21   76.1   0.0    2.9e-21   75.6   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
     0.0031   16.7   0.0     0.0053   16.0   0.0    1.3  1  PF10707.4  PhoP regulatory network protein YrbL
  ------ inclusion threshold ------
        4.4    6.4   6.2        8.4    5.5   4.3    1.4  1  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.9   0.0   1.6e-57   5.6e-54      80     260 .]       2     180 ..       1     180 [. 0.96

  Alignments for each domain:
  == domain 1    score: 182.9 bits;  conditional E-value: 1.6e-57
                 -SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEE...TT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20  80 veggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLld...kkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 + gg++fd + k+  ++e+e++k++ q++ +l+y+Hs+gi+HrD+KpeN+L      ++++kiaDFGla    k++e+l+t +gt+ Y+APEvl  +++y+++vD+Ws+Gv++y ll+g +pf+++   +   l+++i+k++++++ + ++  s+e+kd+i+kll+ d ++Rl+a+++++h w+
  MMETSP1325-20131115|4624_1   2 CVGGEMFDRIVKKSMYTEDEARKCVAQMADALDYCHSKGIVHRDIKPENLLYArpdPDETVKIADFGLAHL-LKKDEHLKTACGTPGYVAPEVLT-GEGYGTEVDMWSIGVVVYILLCGYPPFYDD---STAILFNMIKKGEYDFNPQYWDAVSDEAKDFISKLLCVDSTQRLSAAQVKEHVWM 180
                 8899*******99999************************************843356777********97.***********************.******************************...999999**********************************************997 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   0.0   8.4e-25   2.9e-21      83     257 ..       2     176 ..       1     178 [. 0.83

  Alignments for each domain:
  == domain 1    score: 75.6 bits;  conditional E-value: 8.4e-25
                 --B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TT...SBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12  83 vkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee...ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpek...cpeelyelmkqCweeepeeRptfkelve 257
                 + gG++ + + kk  +  t ++  k+++q+a++++y +sk +vHrd+   N L ++   +++vki+DfGLa+ ++kd++ k+   a     ++apE+l+ + + ++ D+Ws Gv+++ +++ g  p+ + s++ +++++k+g+   +p++   +++e ++++++ +  + ++R + +++ e
  MMETSP1325-20131115|4624_1   2 CVGGEMFDRIVKK--SMYTEDEARKCVAQMADALDYCHSKGIVHRDIKPENLLYARpdpDETVKIADFGLAHLLKKDEHLKT---ACGTPGYVAPEVLTGEGYGTEVDMWSIGVVVYILLC-GYPPFYDDSTAILFNMIKKGEYDFNPQYwdaVSDEAKDFISKLLCVDSTQRLSAAQVKE 176
                 5566666666665..7788888999******************************988788*************66555543...3445689*************************8888.99***************998876666651116789999999999999999998888776 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.5e-06    0.0053     115     175 ..      13      75 ..       4      84 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.5e-06
   PF10707.4 115 kedglta....alaeaLeefleallenrIvardlkpknivvgrrsegeeelvlvDGlGdkelipl 175
                 k++ +t+    +  +++ + l+++  ++Iv rd+kp+n+++ r + +e ++ + D +G  +l++ 
  MMETSP1325-20131115|4624_1  13 KKSMYTEdearKCVAQMADALDYCHSKGIVHRDIKPENLLYARPDPDE-TVKIAD-FGLAHLLKK 75 
                 555554430023446788999*************************99.888888.777777765 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   4.3    0.0025       8.4     187     214 ..     324     351 ..     312     360 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0025
   PF05308.6 187 evppppppPpPlpavslqqsasaielik 214
                  +p  pppPpP+p+   ++sasai+l +
  MMETSP1325-20131115|4624_1 324 PEPLAPPPPPPPPFFLKRPSASAISLSE 351
                 4556788888888888899999997764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.39s 00:00:01.05 Elapsed: 00:00:00.52
# Mc/sec: 1695.88
//
Query:       MMETSP1325-20131115|4628_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-28   98.6   0.0    2.9e-28   98.3   0.0    1.0  1  PF00171.17 Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> PF00171.17  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.3   0.0   2.1e-32   2.9e-28     324     460 ..       6     141 ..       2     143 .. 0.92

  Alignments for each domain:
  == domain 1    score: 98.3 bits;  conditional E-value: 2.1e-32
                 HHHHHH---EEEE--EE.EE---ETTEEEEEEEES--TTSGGGTS---SSEEEEEEESSHHHHHHHHHSSSB-.--EEEE-SBHHHHHHHHHHS----EEESS-TT--TTTS-B---TTTEE--BSSHHHHHHTEEEE CS
  PF00171.17 324 ieeakeegaklllGGeeekaglekgyfvePtvladvtpdmriaqeEiFGPVlsvikfkdeeeaielaNdteyG.LaaavftedleraervaerleaGnvwiNdsstgdaealpfgGvkqSglGreggkegleeytevk 460
                 + ea+e ga++l+GG  + + +  + +++Ptvl + ++d+r+++eEiFGP+l++ +++++e+ai ++N+ e   La ++ft++++ + +v ++  +G    Nd  ++ a+++pfgG + Sg+G+ ++k++++ +t  +
  MMETSP1325-20131115|4628_1   6 LLEAEEGGATVLCGG--SAKCDPANRYIAPTVLINAPTDSRVLTEEIFGPILVIREVDHVEQAISVVNEMEGTpLALYIFTTNKSVCDKVLDACPSGGAVRNDVLIHFASSMPFGGLGTSGYGNAHSKWSWRTFTHER 141
                 5689999********..455667789*******************************************986449***********************************9*********************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1183.51
//
Query:       MMETSP1325-20131115|4631_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 366.24
//
Query:       MMETSP1325-20131115|4614_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|4636_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-05   23.9   0.0    0.00019   20.9   0.0    2.0  2  PF00514.18 Armadillo/beta-catenin-like repeat
     0.0023   17.7   0.0      0.012   15.5   0.0    1.9  2  PF02985.17 HEAT repeat
      0.003   17.6   0.0     0.0036   17.4   0.0    1.2  1  PF13646.1  HEAT repeats
  ------ inclusion threshold ------
      0.036   12.8   0.0      0.042   12.6   0.0    1.1  1  PF00490.16 Delta-aminolevulinic acid dehydratase
       0.11   12.2   0.0       0.12   12.0   0.0    1.1  1  PF13581.1  Histidine kinase-like ATPase domain


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   7.1e-08   0.00019       5      41 .]      11      47 ..       9      47 .. 0.96
   2 ?    0.8   0.0      0.16   4.3e+02       9      22 ..      53      66 ..      52      75 .. 0.80

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 7.1e-08
                HHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHHT CS
  PF00514.18  5 kqavieaGavppLvqLLksgdeevqeeAawALsNLaa 41
                ++a++eaG vp L++L ks  e+v+  +  AL NL++
  MMETSP1325-20131115|4636_1 11 REALVEAGMVPTLIRLSKSATEKVRISCSEALKNLSS 47
                789********************************96 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.16
                HHCHHHHHHHHHHC CS
  PF00514.18  9 ieaGavppLvqLLk 22
                ie+G v  L+++  
  MMETSP1325-20131115|4636_1 53 IEEGTVSTLISMSL 66
                79999***999855 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.64   1.7e+03      11      23 ..       5      17 ..       2      17 .. 0.75
   2 !   15.5   0.0   4.2e-06     0.012       2      29 ..      20      47 ..      19      48 .. 0.93

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.64
                SSSHHHHHHHHHH CS
  PF02985.17 11 DpspeVReaAaea 23
                ++++ +Rea +ea
  MMETSP1325-20131115|4636_1  5 SKAALIREALVEA 17
                5677899998876 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 4.2e-06
                HHHHHHHHTSSSHHHHHHHHHHHHHHHH CS
  PF02985.17  2 lPlllkllnDpspeVReaAaeaLgalae 29
                +P l++l+++ +++VR ++ eaL +l++
  MMETSP1325-20131115|4636_1 20 VPTLIRLSKSATEKVRISCSEALKNLSS 47
                8***********************9975 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.3e-06    0.0036      29      70 ..      16      64 ..       4      75 .. 0.74

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.3e-06
   PF13646.1 29 seealpaLlelLkdsdpevRraAaeaLgklg.......dpealpaLlkl 70
                ++ ++p+L++l k+  ++vR+++ eaL +l+       ++  +++L+ +
  MMETSP1325-20131115|4636_1 16 EAGMVPTLIRLSKSATEKVRISCSEALKNLSssggdgiEEGTVSTLISM 64
                4678**************************5222333335567777665 PP

>> PF00490.16  Delta-aminolevulinic acid dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.5e-05     0.042      85     145 ..       6      57 ..       3      79 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.5e-05
                 ------GGG-----HHHHHHHHHHHSTTS--EEEE-SCCCS-------B..----B-CHHH CS
  PF00490.16  85 kdeagsealnedglvqrairaikeevpellvitDvcldeYtshGhcGilkeeegevlndet 145
                 k +  +eal e g+v++ ir  k++++++ + +  +l + +s+G +Gi +          t
  MMETSP1325-20131115|4636_1   6 KAALIREALVEAGMVPTLIRLSKSATEKVRISCSEALKNLSSSGGDGIEEG---------T 57 
                 666678999**************************************9853.........2 PP

>> PF13581.1  Histidine kinase-like ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.2e-05      0.12       9      59 ..      11      61 ..       4      82 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.2e-05
   PF13581.1  9 rtarsvlaavlrraglseealdeielavdEaltNavrhgyredpdgpvevr 59
                r+a   +  v + ++ls++a++++++  +Eal N    g ++ ++g+v   
  MMETSP1325-20131115|4636_1 11 REALVEAGMVPTLIRLSKSATEKVRISCSEALKNLSSSGGDGIEEGTVSTL 61
                555555555556689***************************999999655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.62
# Mc/sec: 324.67
//
Query:       MMETSP1325-20131115|4639_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|4638_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-07   29.3   0.5      0.015   15.1   0.2    2.3  2  PF13516.1  Leucine Rich repeat
    0.00011   21.6   0.1       0.69   10.0   0.0    2.2  2  PF00560.28 Leucine Rich Repeat
     0.0029   17.0   0.1      0.011   15.2   0.1    1.8  1  PF12799.2  Leucine Rich repeats (2 copies)
     0.0067   16.0   0.3      0.051   13.2   0.3    1.9  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
       0.02   14.3   1.3       0.86    9.0   0.3    1.9  2  PF04528.8  Adenovirus early E4 34 kDa protein conserved region
      0.043   13.9   0.2         15    6.2   0.1    2.3  2  PF13504.1  Leucine rich repeat
        7.3    6.0   6.7         32    3.9   0.1    3.4  4  PF02132.10 RecR protein


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.2   7.9e-06     0.015       1      19 [.       9      28 ..       9      38 .. 0.73
   2 !   12.5   0.0   5.5e-05      0.11       1      23 [.      40      63 ..      40      64 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 7.9e-06
   PF13516.1  1 lknLtsLdLsn.NqigdeGl 19
                + nLt++dL+  N+++d+ l
  MMETSP1325-20131115|4638_1  9 CANLTTIDLGEcNNLTDDIL 28
                77*******97256999986 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 5.5e-05
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + nLt++ L ++  i+d  + aLa
  MMETSP1325-20131115|4638_1 40 CANLTTIYLRRCEnITDAAVIALA 63
                77**********55******9998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00038      0.74       1      15 [.      11      27 ..      11      36 .. 0.84
   2 !   10.0   0.0   0.00035      0.69       1      14 [.      42      56 ..      42      66 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00038
                TESEEEETSS.BCB.CH CS
  PF00560.28  1 nLeeLdLsgN.nlt.sl 15
                nL+++dL  + nlt ++
  MMETSP1325-20131115|4638_1 11 NLTTIDLGECnNLTdDI 27
                8*********9**9554 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00035
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL++++L+++ n+t+
  MMETSP1325-20131115|4638_1 42 NLTTIYLRRCeNITD 56
                8************97 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   5.5e-06     0.011       2      41 ..      11      59 ..      10      63 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 5.5e-06
   PF12799.2  2 nLevLdLsn.NnIkd..lppe....la.nLpnLktLnLsnN.pisdlsa 41
                nL+++dL + Nn++d  l       la  + nL+t++L ++ +i+d  +
  MMETSP1325-20131115|4638_1 11 NLTTIDLGEcNNLTDdiLTDAaviaLAtHCANLTTIYLRRCeNITDAAV 59
                9*******967899666432234335358***********977999765 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.3   2.6e-05     0.051      23      59 ..       8      51 ..       4      54 .. 0.83
   2 !    5.4   0.0    0.0071        14      24      38 ..      40      55 ..      33      63 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.6e-05
   PF13855.1 23 glsnLkvLdLs.gnnlk.sispea.....fkgLpsLreLnLsgN 59
                ++ nL+++dL+ +nnl+  i ++a       ++ +L+ ++L+ +
  MMETSP1325-20131115|4638_1  8 HCANLTTIDLGeCNNLTdDILTDAavialATHCANLTTIYLRRC 51
                799*************6577777668888999999999999876 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0071
   PF13855.1 24 lsnLkvLdLs.gnnlk 38
                + nL++++L  + n++
  MMETSP1325-20131115|4638_1 40 CANLTTIYLRrCENIT 55
                5666666666444444 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.003         6      80     110 ..       2      32 ..       1      37 [. 0.86
   2 ?    9.0   0.3   0.00044      0.86      77     111 ..      30      64 ..      28      68 .] 0.80

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.003
   PF04528.8  80 vvlvCksCaelseisvrcCarrtrellrral 110
                 v+ + ++Ca+l+ i +  C + t  +l  a+
  MMETSP1325-20131115|4638_1   2 VIALATHCANLTTIDLGECNNLTDDILTDAA 32 
                 6777899****************99998876 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00044
   PF04528.8  77 nnlvvlvCksCaelseisvrcCarrtrellrralk 111
                 +  v+ + ++Ca+l+ i++r+C + t + +  +++
  MMETSP1325-20131115|4638_1  30 DAAVIALATHCANLTTIYLRRCENITDAAVIALAT 64 
                 567899999*************9998877666555 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0077        15       2      15 ..      11      25 ..      10      29 .. 0.86
   2 ?    5.7   0.0     0.011        22       2      14 ..      42      55 ..      41      60 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0077
   PF13504.1  2 nLkeLdLsgnr.Lts 15
                nL++ dL  ++ Lt+
  MMETSP1325-20131115|4638_1 11 NLTTIDLGECNnLTD 25
                8******99887985 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.011
   PF13504.1  2 nLkeLdLsgnr.Lt 14
                nL++ +L++++ +t
  MMETSP1325-20131115|4638_1 42 NLTTIYLRRCEnIT 55
                8*********8787 PP

>> PF02132.10  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.37   7.2e+02      23      28 ..       9      14 ..       7      17 .. 0.74
   2 ?    3.9   0.1     0.017        32      22      29 ..      19      26 ..      18      30 .. 0.88
   3 ?   -1.4   0.0      0.72   1.4e+03      23      27 ..      40      44 ..      36      45 .. 0.75
   4 ?    3.9   0.1     0.017        33      21      30 ..      49      58 ..      49      68 .] 0.80

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.37
  PF02132.10 23 Cgnlte 28
                C nlt+
  MMETSP1325-20131115|4638_1  9 CANLTT 14
                999997 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.017
  PF02132.10 22 vCgnltee 29
                +C+nlt++
  MMETSP1325-20131115|4638_1 19 ECNNLTDD 26
                6*****97 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.72
  PF02132.10 23 Cgnlt 27
                C nlt
  MMETSP1325-20131115|4638_1 40 CANLT 44
                88887 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.017
  PF02132.10 21 svCgnlteed 30
                ++C n+t+  
  MMETSP1325-20131115|4638_1 49 RRCENITDAA 58
                58*****975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 285.88
//
Query:       MMETSP1325-20131115|4643_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        66  (0.00482738); expected 273.4 (0.02)
Passed bias filter:                       58  (0.00424225); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|4646_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 235.20
//
Query:       MMETSP1325-20131115|4645_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.047   13.0   0.0      0.082   12.2   0.0    1.4  1  PF11547.3  E3 ubiquitin ligase EDD
      0.056   13.2   1.4      0.074   12.8   0.1    1.9  3  PF10902.3  Protein of unknown function (DUF2693)
        1.2    7.3   8.0        1.4    7.1   5.6    1.2  1  PF03961.8  Protein of unknown function (DUF342)
        2.6    7.5   7.0       0.86    9.0   2.7    1.7  2  PF12470.3  Suppressor of Fused Gli/Ci N terminal binding domain
        3.5    6.8  21.4        5.5    6.2  14.8    1.4  1  PF09756.4  DDRGK domain


Domain annotation for each model (and alignments):
>> PF11547.3  E3 ubiquitin ligase EDD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     3e-05     0.082      22      48 ..     150     176 ..     138     177 .] 0.85

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3e-05
                 ---HHHHHHHHHHTTT-HHHHHHHHHH CS
   PF11547.3  22 GksRnviiRELqRtnLDvnLAvnnLLs 48 
                    R vi+R L+   +D+n  v +LLs
  MMETSP1325-20131115|4645_1 150 SDLRAVIVRGLKDKHIDINATVGDLLS 176
                 5569**********************9 PP

>> PF10902.3  Protein of unknown function (DUF2693)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       0.9   2.5e+03      37      45 ..      37      45 ..      17      71 .. 0.57
   2 ?   -1.6   0.0      0.83   2.3e+03      32      32 ..      80      80 ..      45      98 .. 0.55
   3 ?   12.8   0.1   2.7e-05     0.074       3      74 ..      95     169 ..      93     177 .] 0.73

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.9
   PF10902.3 37 ekaekeerk 45
                e+a +e+r+
  MMETSP1325-20131115|4645_1 37 EAAFEEKRR 45
                333333222 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.83
   PF10902.3 32 g 32
                 
  MMETSP1325-20131115|4645_1 80 V 80
                1 PP

  == domain 3    score: 12.8 bits;  conditional E-value: 2.7e-05
   PF10902.3   3 helvFeKadgti.RvmkatrdealveveekgkklfekaekeerkEskes.vrvy..dvelkawRsFrldklisvng 74 
                 hel  +K++++i R +ka++ +   e +ek+  l+++ae++ r E      ++y  d+ +   R+ + dk i +n+
  MMETSP1325-20131115|4645_1  95 HELAAKKKQDEIdRKAKAAQAKLNAEAAEKEALLLQAAEEQRRAEAAAAaQQAYlsDLRAVIVRGLK-DKHIDINA 169
                 7888777776665****************************99998766433442255555556655.66666665 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   5.6   0.00051       1.4     337     420 ..      38     121 ..      10     162 .. 0.57

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00051
   PF03961.8 337 keleeeleeleeeleklkkk.lkklpklka.egqlesekkeqleklletkeklkeeleeleaelkelkeeleskkkeakikvnkei 420
                 +++ee+ +++e++l   + +  +++ +++a ++ql++ + + +++l+++k + +++ +el a++k  ++e+++k+k+a+ k n e+
  MMETSP1325-20131115|4645_1  38 AAFEEKRRQFEAQLAAKETAqAQRIAEMEAhQKQLPELHAKRVAELKKAKDEEERKAHELAAKKK--QDEIDRKAKAAQAKLNAEA 121
                 33333333333333222222222222222225577788888888888888888888777777777..6666666444444444443 PP

>> PF12470.3  Suppressor of Fused Gli/Ci N terminal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.21   5.7e+02      44      73 ..      36      65 ..      15      82 .. 0.54
   2 ?    9.0   2.7   0.00032      0.86      25     116 ..      81     177 .]      59     177 .] 0.65

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.21
   PF12470.3 44 edkdteeirealseskeikeeaslpptlsq 73
                 + + ee r+ ++ +++ ke a+ + + + 
  MMETSP1325-20131115|4645_1 36 LEAAFEEKRRQFEAQLAAKETAQAQRIAEM 65
                244555555555555555555555544433 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00032
   PF12470.3  25 kelsktaidkeesrsillgedkdteei.realseskeikeeaslpptlsqssnslakdsevsaadvpselvr.....trqLegielklaqeaakllll 116
                  el+k+  d+ee +   l+++k+++ei r+a   + + + ea ++++l  +  + ++ +e +aa  +  l++     +r L+  ++ ++ +++ ll +
  MMETSP1325-20131115|4645_1  81 AELKKA-KDEEERKAHELAAKKKQDEIdRKAKAAQAKLNAEAAEKEALLLQAAEEQRRAEAAAAAQQAYLSDlraviVRGLKDKHIDINATVGDLLSM 177
                 466766.6666666666777666666515666667778888988888766665555554555555554444311122778999999999999998865 PP

>> PF09756.4  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  14.8     0.002       5.5       8     104 ..      48     152 ..      30     166 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.002
                 XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.-HHHH CS
   PF09756.4   8 akkleekearkqqreaeee.ereerkkkeekrekerkee......eekeeekekkkeeeerkeeeekerkeqeeyeklksefvveeegeekesseeeek.lleef 104
                 +++l++ke  ++qr ae+e ++++   +++kr +e k++      + +e +++kk+ e++rk+++ +++ ++e+ ek    ++  ee   +e +  +++  l+++
  MMETSP1325-20131115|4645_1  48 EAQLAAKETAQAQRIAEMEaHQKQLPELHAKRVAELKKAkdeeerKAHELAAKKKQDEIDRKAKAAQAKLNAEAAEKEALLLQAAEEQRRAEAAAAAQQaYLSDL 152
                 578888999999998875514455556666666665555222111444445567788899999999999999999999999988888888777777666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2120  (0.155061); expected 273.4 (0.02)
Passed bias filter:                      648  (0.0473961); expected 273.4 (0.02)
Passed Vit filter:                       112  (0.00819193); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.40s 00:00:01.19 Elapsed: 00:00:00.68
# Mc/sec: 623.76
//
Query:       MMETSP1325-20131115|4644_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 785.47
//
Query:       MMETSP1325-20131115|4650_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        69  (0.00504681); expected 273.4 (0.02)
Passed bias filter:                       66  (0.00482738); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|4653_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 831.68
//
Query:       MMETSP1325-20131115|4659_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|4655_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.4e-33  113.8   0.0    6.9e-33  113.4   0.0    1.1  1  PF03982.8 Diacylglycerol acyltransferase


Domain annotation for each model (and alignments):
>> PF03982.8  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   0.0   5.1e-37   6.9e-33      55     296 ..      25     250 ..      20     251 .] 0.89

  Alignments for each domain:
  == domain 1    score: 113.4 bits;  conditional E-value: 5.1e-37
   PF03982.8  55 ktaeletdrnYliGyhPhgilsvgafvalatdatgvkekfpgirfnlatLagqfrtpfrreillllGlievsresieyvLdkeekGravvlvvGGaeealeahpgketltLkkrkGfvkialktGadLvPvysfGendvykqvenpkgsklrkvqeklkkvlglsppilyGrglfnsltlGllPf..rkpittvvGkPievtkteePtkeeidelhakYveaLaeLfeehkekfgvskdtkLvl 296
                 +t++ ++ +  ++  hPhg++++   ++++       +kf g  +  ++ ++  ++pf r+++ +lG++ ++  ++++ +++   G+ +++++GG+ee + a  + e   + krkGf+k+al++G dLvP+y  Ge  +++ + +    +  kv+ +l k++ l+  i +G ++f      l+P    k   tvvG+ i ++ +eeP++e ++++ha YveaL++L+ eh+e + + +d +L+l
  MMETSP1325-20131115|4655_1  25 ETEDKSKAKPTMFCHHPHGVVAINP-CSMG-------SKF-GRNPRAVVAPACLKMPFCRQLMECLGMVSSAGPAMKSFMKQ---GQDMAIIPGGVEEVVLASSKVERSYILKRKGFIKYALQNGYDLVPLYHLGETSLFDVMYPLDTPTALKVRLWLAKKVSLATGIGFGWSFFP-----LVPKpdMKC-VTVVGNRIAMPIVEEPSREMVEQYHAAYVEALKKLYYEHRELHPLYRDRDLEL 250
                 677778888899********99988.5555.......443.33477788899*************************99876...5559*****************************************************9998888888*******************99999.....566410455.5799********************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.44s 00:00:00.90 Elapsed: 00:00:00.55
# Mc/sec: 1093.61
//
Query:       MMETSP1325-20131115|4661_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 244.16
//
Query:       MMETSP1325-20131115|4662_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-12   47.6   0.0    1.4e-12   47.1   0.0    1.2  1  PF01250.12 Ribosomal protein S6


Domain annotation for each model (and alignments):
>> PF01250.12  Ribosomal protein S6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0     1e-16   1.4e-12       3      91 ..      11     108 ..       9     109 .. 0.97

  Alignments for each domain:
  == domain 1    score: 47.1 bits;  conditional E-value: 1e-16
                 EEEEEEE-TTS-HHHHHHHHHHHHHHHHHT--EEEEEEE------SSSBTTB.........----EEEEEEEE-GGGCHHHHHHHCTSTTEEEEEEEE CS
  PF01250.12   3 YEtmlilrpdlseeevkaliekvkklleenggeivkveewgkrkLaYpIkkk.........keGyYvlinfeaepeavaelerklrinedvlRflivk 91 
                 Y  ++i  +d+ ++ev+++++k  +++ +ngg +   e+ g r+L Y+I+           k + Y+ ++f+a p++  ++e +lr+ne+vlRf +++
  MMETSP1325-20131115|4662_1  11 YHSLIITLADMPKKEVADMLKKSCHTIFDNGGWVRAAENHGVRDLPYRIRSPyspeesryqKSARYLSLYFDAHPNTKGDMELALRLNEKVLRFNTFR 108
                 88899999*******************************************99*****************************************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 818.76
//
Query:       MMETSP1325-20131115|4660_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-08   33.9   0.0    4.6e-07   29.8   0.0    2.2  2  PF03143.12 Elongation factor Tu C-terminal domain


Domain annotation for each model (and alignments):
>> PF03143.12  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   3.4e-11   4.6e-07       6      73 ..     123     190 ..     118     194 .. 0.76
   2 ?    1.7   0.0     0.021   2.8e+02      49      69 ..     229     252 ..     214     256 .. 0.69

  Alignments for each domain:
  == domain 1    score: 29.8 bits;  conditional E-value: 3.4e-11
  PF03143.12   6 tkfkAqvyvlnkptpikagYrpvlyvrTadvtgkivellkkldsekkefvkpGdnvkvevelikpiav 73 
                  +f+A+v++l++p +i+ +Y+pv++v+T+++ ++i+ ++     e+ +   +G ++ +  +l+kp ++
  MMETSP1325-20131115|4660_1 123 FEFTAEVLLLHHPAAINVKYEPVVHVHTISQCAQITAIDCPPAAEQGDAEVEGGTTAAASKLTKPAVI 190
                 58*******************************99999665553333444455555555666666665 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.021
  PF03143.12  49 sekk...efvkpGdnvkvevelik 69 
                 +e+k    ++++G++++v+++++ 
  MMETSP1325-20131115|4660_1 229 KEGKgggMVIREGQRATVRFKFMY 252
                 222245589999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1520.95
//
Query:       MMETSP1325-20131115|4664_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 206.74
//
Query:       MMETSP1325-20131115|4666_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.045   13.2   0.0      0.056   12.9   0.0    1.2  1  PF04456.7 Protein of unknown function (DUF503)
        0.2   10.9   7.5       0.23   10.7   5.2    1.1  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF04456.7  Protein of unknown function (DUF503)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.2e-06     0.056       6      33 ..      26      53 ..      22      71 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 8.2e-06
   PF04456.7  6 elelrlpgvhSLKeKRsvvksllarlrn 33
                + ++rl+ ++ LK KR+ +  +++++ +
  MMETSP1325-20131115|4666_1 26 TTDIRLQAAQRLKSKRQSMAGVVTQASA 53
                6799*****************9998765 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   5.2   3.4e-05      0.23      30      87 ..      14      75 ..       6      86 .. 0.52

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 3.4e-05
   PF10500.4 30 srseksrkksksskesrkkrekkkkkrrers....ssssssssssssssssssskseekrkk 87
                ++ e++rk+  ++ + r + +++ k +r+      ++ s+sssss ss    +s + ++++k
  MMETSP1325-20131115|4666_1 14 EQMERERKSIMNTTDIRLQAAQRLKSKRQSMagvvTQASASSSSSRSSGTGADSRRFASARK 75
                55667777667777766555555444443335777344444444444433333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       686  (0.0501755); expected 273.4 (0.02)
Passed bias filter:                      466  (0.0340843); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.59
# Mc/sec: 398.04
//
Query:       MMETSP1325-20131115|4667_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.45
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|4668_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   14.3   0.8      0.022   14.3   0.5    1.2  1  PF00997.13 Kappa casein
      0.035   13.6   0.5      0.047   13.2   0.3    1.2  1  PF09141.5  Talin, middle domain
      0.076   12.7   0.0        1.5    8.5   0.0    2.2  2  PF06698.6  Protein of unknown function (DUF1192)


Domain annotation for each model (and alignments):
>> PF00997.13  Kappa casein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.5   4.9e-06     0.022     112     151 ..      66     109 ..      13     116 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.9e-06
  PF00997.13 112 ptintiatveptp....vpttepiVntvvtpeassefitstPeT 151
                   +++ia++ +tp    v + e++V t + ++as++ + +  eT
  MMETSP1325-20131115|4668_1  66 AEVDAIAAARSTPvveeVMAEEAVVTTTAVTDASPKEMPKMKET 109
                 5789*********66666788*************9988544444 PP

>> PF09141.5  Talin, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.3     1e-05     0.047       5      86 ..       9      98 ..       6     111 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1e-05
   PF09141.5  5 llgtisagidavekAeeeLee...kaqlpelgsDl....askkWrenkldvskqevasrlaalsAat.Asvvnltagepadvdydavgaa 86
                +++t++ag+d v+kA e  ++   ++q+ ++g+ +    +s    ++++d    +v+ +++a++Aa    vv+   +e+a v ++av+ a
  MMETSP1325-20131115|4668_1  9 YVATVKAGVDFVSKAREARSKpltEQQIAAYGDYPpyadRSFGISKEEVDAYIANVKAEVDAIAAARsTPVVEEVMAEEAVVTTTAVTDA 98
                7899********9998877652226779999986433225666789*****************998615699999999999999998755 PP

>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.041   1.9e+02      21      48 ..       1      28 [.       1      32 [. 0.84
   2 ?    8.5   0.0   0.00033       1.5      22      44 ..      53      75 ..      51      78 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.041
   PF06698.6 21 LSveELeeRIalLqaEIaRleaalakkk 48
                +S  E++e++a  +a ++ + +a+++++
  MMETSP1325-20131115|4668_1  1 MSKAEIDEYVATVKAGVDFVSKAREARS 28
                6889*******99999988888888776 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00033
   PF06698.6 22 SveELeeRIalLqaEIaRleaal 44
                S eE +++Ia  +aE++ + aa+
  MMETSP1325-20131115|4668_1 53 SKEEVDAYIANVKAEVDAIAAAR 75
                889**************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 724.01
//
Query:       MMETSP1325-20131115|4669_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 1040.24
//
Query:       MMETSP1325-20131115|4672_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   14.1   1.5      0.038   13.8   1.0    1.1  1  PF11683.3  Protein of unknown function (DUF3278)
       0.06   12.2   9.9      0.073   11.9   6.9    1.0  1  PF04633.7  Herpesvirus BMRF2 protein
      0.068   12.6   3.3      0.076   12.4   2.3    1.1  1  PF02660.10 Glycerol-3-phosphate acyltransferase
      0.074   12.2   6.1      0.086   12.0   4.3    1.0  1  PF03824.11 High-affinity nickel-transport protein
       0.13   11.6   4.5       0.15   11.4   3.1    1.1  1  PF02361.11 Cobalt transport protein
       0.23    9.7   3.1       0.24    9.6   2.1    1.0  1  PF09531.5  Nucleoporin protein Ndc1-Nup
       0.24   11.5   5.0       0.32   11.1   3.5    1.2  1  PF13571.1  Domain of unknown function (DUF4133)
       0.31   10.7   5.7       0.33   10.6   3.9    1.1  1  PF11023.3  Protein of unknown function (DUF2614)
       0.33   10.5   5.9       0.37   10.3   4.1    1.1  1  PF12351.3  Ca2+ regulator and membrane fusion protein Fig1
       0.33   10.4   4.0       0.36   10.3   2.8    1.0  1  PF06687.7  SUR7/PalI family
       0.35    8.6   4.4       0.37    8.5   3.1    1.0  1  PF03699.8  Uncharacterised protein family (UPF0182)
       0.49    7.9   4.2        0.5    7.8   2.9    1.0  1  PF13779.1  Domain of unknown function (DUF4175)
       0.53    9.1   4.0       0.57    9.0   2.8    1.0  1  PF03186.8  CobD/Cbib protein
       0.74    8.2   5.1       0.86    8.0   3.5    1.0  1  PF04547.7  Calcium-activated chloride channel
        1.1    8.1   4.6        1.4    7.6   3.2    1.2  1  PF01616.11 Orbivirus NS3
        1.2    7.4   8.4        1.3    7.2   5.8    1.0  1  PF03169.10 OPT oligopeptide transporter protein
        1.3    8.4   8.9        1.5    8.2   6.2    1.1  1  PF11241.3  Protein of unknown function (DUF3043)
        1.3    9.1   4.6        1.5    8.9   3.2    1.1  1  PF12676.2  Protein of unknown function (DUF3796)
        1.6    7.9   7.6        1.9    7.6   5.3    1.1  1  PF08006.6  Protein of unknown function (DUF1700)
        5.5    6.4   8.7        6.9    6.0   6.0    1.1  1  PF10777.4  sigma70 family sigma factor YlaC


Domain annotation for each model (and alignments):
>> PF11683.3  Protein of unknown function (DUF3278)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.0   5.5e-05     0.038      38     108 ..      14      84 ..       2      88 .. 0.48

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.5e-05
   PF11683.3  38 iilflililaslialllaskype.evalillstlllllilivsvyilyqskkkkltdlevekkde.skakkkl 108
                 ++l ++++++ ++++++ +++    v +  l+ ++lll ++++v++++q+ ++++++ +v ++++ s+++k++
  MMETSP1325-20131115|4672_1  14 LVLVMVMVVIMVLVVVFKQVSVLsMVVVERLVVSFLLL-VMAAVVMAIQQVRDGVQK-DVAHQSTrSETEKAF 84 
                 23333333333333333222222133333333444444.445678889999999976.555555504455544 PP

>> PF04633.7  Herpesvirus BMRF2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   6.9   0.00011     0.073     265     323 ..      12      71 ..       7      75 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00011
   PF04633.7 265 itlvllllalvllilvhvlge..gldllakrvllvsllllsyfqaigceleiirkkLkrai 323
                  +lvl+++ +v+++lv+v+++   l +  ++ l+vs lll + +a+   ++ +r   ++++
  MMETSP1325-20131115|4672_1  12 TVLVLVMVMVVIMVLVVVFKQvsVLSMVVVERLVVSFLLLVM-AAVVMAIQQVRDGVQKDV 71 
                 678999999999999999987225677788889999888855.9**********9999987 PP

>> PF02660.10  Glycerol-3-phosphate acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   2.3   0.00011     0.076     109     148 ..      11      50 ..       4      81 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00011
  PF02660.10 109 lsplvalillivflivllltryvslasliaalllpllvll 148
                 +++lv++++++v++++++++++vs+ s++++  l++ +ll
  MMETSP1325-20131115|4672_1  11 VTVLVLVMVMVVIMVLVVVFKQVSVLSMVVVERLVVSFLL 50 
                 5666777777788888999999999999955444443333 PP

>> PF03824.11  High-affinity nickel-transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   4.3   0.00013     0.086      49     119 ..      14      81 ..       9      87 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00013
  PF03824.11  49 lvqvlvalllvllaklvlrltslsetgatigteisgsfllvigllnllllrkllklfrklrrgrapaadle 119
                 lv v+v +++++l+++++   ++s  ++++  ++++sfll+++++ ++ +++++   +k  + ++  +++e
  MMETSP1325-20131115|4672_1  14 LVLVMVMVVIMVLVVVFK---QVSVLSMVVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVAHQSTRSETE 81 
                 233333333444444444...57777778888888***************999988776655555555555 PP

>> PF02361.11  Cobalt transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   3.1   0.00022      0.15      26      86 ..      12      70 ..       4      85 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00022
  PF02361.11 26 lpigfvflsvifllvlfvfliaklpsaiksitlllllllfvlwfifllfgnyqdnvfsgvf 86
                 +  +v++ v+++++++vf  +++ s + +  l++ +ll+v+  +++++  +q+ +  ++ 
  MMETSP1325-20131115|4672_1 12 TVLVLVMVMVVIMVLVVVFKQVSVLSMVVVERLVVSFLLLVMAAVVMAI--QQVRDGVQKD 70
                3333333333444444444444444888888999999999999999988..6655555544 PP

>> PF09531.5  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.1   0.00035      0.24      13      81 ..      14      76 ..       8      88 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00035
   PF09531.5 13 allllllyllllvflllskfsiqwsslslsllpsgstgirllllflalllililrkeqlhveyrisssl 81
                ++l+++++++++++++     ++ +s  ls+++  ++++++lll++a++++ i  ++   ++ + ++s+
  MMETSP1325-20131115|4672_1 14 LVLVMVMVVIMVLVVV-----FKQVSV-LSMVVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVAHQST 76
                3444444444444455.....456666.6666666****************999988888777777654 PP

>> PF13571.1  Domain of unknown function (DUF4133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.5   0.00046      0.32      22      81 ..      16      75 ..       9      85 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00046
   PF13571.1 22 laggllavlvvvvvlylagvnqliciglgvvsasllvlktfrlnkkyGehGlmkllakkk 81
                l+  +++++v+vvv+  + v +++++   vvs  llv++   +  +  + G+ k  a+++
  MMETSP1325-20131115|4672_1 16 LVMVMVVIMVLVVVFKQVSVLSMVVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVAHQS 75
                555678888888999999999999999999**********99999999999999998875 PP

>> PF11023.3  Protein of unknown function (DUF2614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.9   0.00048      0.33      15      58 ..      13      59 ..       3      80 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00048
   PF11023.3 15 alslvfvgllvmyvgilfkeseiilvil...lllglllviastvvyf 58
                 l+lv+v +++m + ++fk+ +++ +++   l++ +ll+++++vv  
  MMETSP1325-20131115|4672_1 13 VLVLVMVMVVIMVLVVVFKQVSVLSMVVverLVVSFLLLVMAAVVMA 59
                5889999999***99***99887643331337889998888888764 PP

>> PF12351.3  Ca2+ regulator and membrane fusion protein Fig1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.1   0.00054      0.37      79     145 ..      10      72 ..       2      82 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00054
   PF12351.3  79 lmaaivLtllsflllayfpggsevpllPfksrpvskvalvlsflavllwlvgalwqhvasvaastvv 145
                 +++++vL+++++++++++ + ++v +l +    v    lv+sfl++++++v ++ q v     + v+
  MMETSP1325-20131115|4672_1  10 PVTVLVLVMVMVVIMVLVVVFKQVSVLSM----VVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVA 72 
                 46677777777777766665556666644....4445677788887777777777777655555555 PP

>> PF06687.7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.8   0.00052      0.36     127     183 ..      12      66 ..       5      84 .. 0.68

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00052
   PF06687.7 127 ialvlsvlllllslllavcsspeplsflnlllsllsflstllaalldtllfvivrgq 183
                 + lvl ++++++++l+ v+ + ++ls+++    ++sfl++++aa+++    v  r+ 
  MMETSP1325-20131115|4672_1  12 TVLVLVMVMVVIMVLVVVFKQVSVLSMVVVERLVVSFLLLVMAAVVMAIQQV--RDG 66 
                 4456777777776666667765577777777778888888888887765555..554 PP

>> PF03699.8  Uncharacterised protein family (UPF0182)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.1   0.00054      0.37      16      76 ..      13      74 ..       4      88 .. 0.54

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00054
   PF03699.8 16 lllvslvlarllvellwfkelgyls.vfltrlltkillfvlvfllvalvvllnlllakrarp 76
                +l++++v++ ++v ++ fk++++ls v+++rl++++ll+v++++++a+  +   +  + a +
  MMETSP1325-20131115|4672_1 13 VLVLVMVMVVIMVLVVVFKQVSVLSmVVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVAHQ 74
                22222234556666677777775442566777777777777777777665555444443333 PP

>> PF13779.1  Domain of unknown function (DUF4175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.9   0.00073       0.5       6      65 ..      13      72 ..       6      88 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00073
   PF13779.1  6 alwpllsvlllflalsllglwdllpplvvlallvlfalaalaalvlpllrfrwpsraeal 65
                +l+++++++++++ ++++   ++l+++vv  l+v f+l+++aa+v+++ ++r   +++++
  MMETSP1325-20131115|4672_1 13 VLVLVMVMVVIMVLVVVFKQVSVLSMVVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVA 72
                455666666777777888889999999999999999999999999999999987776655 PP

>> PF03186.8  CobD/Cbib protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.8   0.00084      0.57      50     105 ..      18      74 ..       3      87 .. 0.41

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00084
   PF03186.8  50 allvlllvllalllallllallklspllgllvealllkttlalrsLaehaka.vaka 105
                 +++v+++vl++++  + +l+++ ++ l+  ++  +++++++a+++ ++ +++ va++
  MMETSP1325-20131115|4672_1  18 MVMVVIMVLVVVFKQVSVLSMVVVERLVVSFLLLVMAAVVMAIQQVRDGVQKdVAHQ 74 
                 122222222222222222222233444444444445555555555555544313333 PP

>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   3.5    0.0013      0.86     126     194 ..      13      81 ..       4      86 .. 0.56

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0013
   PF04547.7 126 pvvllcivlvfllmlgvfelrelvseikeakekptlasflpkilnavlitilnevYkklAkwltdlEnh 194
                 ++vl+++++v++++++vf    ++s +  +  + +++ ++++++ + + ++ + v k +A   t+ E  
  MMETSP1325-20131115|4672_1  13 VLVLVMVMVVIMVLVVVFKQVSVLSMVVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVAHQSTRSETE 81 
                 233333333333333444333333333333335555566666666777778888899999988888865 PP

>> PF01616.11  Orbivirus NS3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.2    0.0021       1.4      98     161 ..      11      73 ..       4      86 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0021
  PF01616.11  98 liaavvalltsavmalsevekelksvlrekekvsitlhvvnlllttlllfaskiaeslkeeikr 161
                 ++++v+++++ ++m l  v k++          ++ ++++ l+++ ++++++++++ +++ + +
  MMETSP1325-20131115|4672_1  11 VTVLVLVMVMVVIMVLVVVFKQVSVLSM-VVVERLVVSFLLLVMAAVVMAIQQVRDGVQKDVAH 73 
                 5566666666666666666665544333.34557788888888888999999998888887754 PP

>> PF03169.10  OPT oligopeptide transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.8    0.0019       1.3     353     408 ..       7      60 ..       2      69 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0019
  PF03169.10 353 evpmwwylallvlslvlgvilvealfgqtqlpvwglllalllaallaipsaiiaGl 408
                 ev   ++l+l+++++v++v++v +    +++  ++++  l++++ll++++a+++++
  MMETSP1325-20131115|4672_1   7 EVAPVTVLVLVMVMVVIMVLVVVFKQ--VSVLSMVVVERLVVSFLLLVMAAVVMAI 60 
                 77778888888888877777776666..99999999999*************9998 PP

>> PF11241.3  Protein of unknown function (DUF3043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   6.2    0.0023       1.5      81     136 ..      16      73 ..       9      86 .. 0.49

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0023
   PF11241.3  81 llpvalvvlvlmlvlpnael.qliasllmlvlllvvvi.dgillgrkvkravaekfpe 136
                 l++v++v++vl++v ++ ++ ++++   ++v +l++v+  +++   +v+  v++   +
  MMETSP1325-20131115|4672_1  16 LVMVMVVIMVLVVVFKQVSVlSMVVVERLVVSFLLLVMaAVVMAIQQVRDGVQKDVAH 73 
                 3445555566666644443303333333444444444404444556677777766665 PP

>> PF12676.2  Protein of unknown function (DUF3796)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.2    0.0022       1.5      64     109 ..      14      61 ..       3      74 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0022
   PF12676.2  64 ivalvllsilllivvllenleiirlli..aislaialltfliklllye 109
                  v ++++++++++vv+++++++  +++   ++++++ll+ +  +++ +
  MMETSP1325-20131115|4672_1  14 LVLVMVMVVIMVLVVVFKQVSVLSMVVveRLVVSFLLLVMAAVVMAIQ 61 
                 344444455555568899999955555356777777766665555544 PP

>> PF08006.6  Protein of unknown function (DUF1700)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.3    0.0027       1.9      81     134 ..      14      61 ..       2      75 .. 0.44

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0027
   PF08006.6  81 ailavlgLgllnliiilipliilillvlslliiglvlllspliLlvkgilkgfv 134
                  +l+++   ++ l++++  + +l ++v+        l++s l+L++++++ +++
  MMETSP1325-20131115|4672_1  14 LVLVMVMVVIMVLVVVFKQVSVLSMVVVE------RLVVSFLLLVMAAVVMAIQ 61 
                 22223333333333333333333333333......3444444444444444443 PP

>> PF10777.4  sigma70 family sigma factor YlaC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   6.0      0.01       6.9      37      83 ..      13      61 ..       6      70 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.01
   PF10777.4 37 ylflamlvsylavlvvll.qseylglesllalvv.llvllsalllldik 83
                 l+l m++  ++vlvv++ q++ l++  +  lvv +l+l+ a++++ i+
  MMETSP1325-20131115|4672_1 13 VLVLVMVMVVIMVLVVVFkQVSVLSMVVVERLVVsFLLLVMAAVVMAIQ 61
                6888898888888888773578888888888887344445666777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1508  (0.110298); expected 273.4 (0.02)
Passed bias filter:                      767  (0.0561001); expected 273.4 (0.02)
Passed Vit filter:                       158  (0.0115565); expected 13.7 (0.001)
Passed Fwd filter:                        35  (0.00255998); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:01.09
# Mc/sec: 195.67
//
Query:       MMETSP1325-20131115|4673_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 202.77
//
Query:       MMETSP1325-20131115|4657_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-05   23.2   2.5    1.7e-05   23.0   1.8    1.0  1  PF02460.13 Patched family
     0.0064   15.3   1.6     0.0085   14.9   1.1    1.1  1  PF03125.13 C. elegans Sre G protein-coupled chemoreceptor
  ------ inclusion threshold ------
      0.011   15.1   6.2      0.015   14.6   4.3    1.2  1  PF12349.3  Sterol-sensing domain of SREBP cleavage-activation


Domain annotation for each model (and alignments):
>> PF02460.13  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   1.8   3.6e-09   1.7e-05     708     786 ..      11      87 ..       4     105 .. 0.77

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 3.6e-09
  PF02460.13 708 iimsi..GFsvDlsaHiayhfvrsegdetakeRvadalealgwPvvqaalSTilcvlvLlfvdsymvevFvK.tvvLvvvlg 786
                 i++si  GFsvD+  H a++ v+++   + + R++++ +++g  v+ + + T ++ ++ lf     ++ F+K   +L++++ 
  MMETSP1325-20131115|4657_1  11 ILISItaGFSVDYVVHLAHAMVEKDM--DLDGRIRESFAEMGVSVFSG-MFTSVGASIFLFL--CKIQFFFKfGTFLCMTIV 87 
                 6666666*****************99..8*****************86.6677777777764..458888884466766653 PP

>> PF03125.13  C. elegans Sre G protein-coupled chemoreceptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   1.1   1.9e-06    0.0085      24      76 ..      46      94 ..      35     101 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.9e-06
  PF03125.13 24 faqlllsivelllyiltayivvvslkvilkirlFHkNllilfiplfviwfeli 76
                fa++ +s+++ +++ + a i ++++    ki++F+k+ ++l +++++ w++ +
  MMETSP1325-20131115|4657_1 46 FAEMGVSVFSGMFTSVGASIFLFLC----KIQFFFKFGTFLCMTIVFSWTFSN 94
                47788999**********9999977....********************9765 PP

>> PF12349.3  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   4.3   3.3e-06     0.015      52     132 ..      22     100 ..      12     104 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3.3e-06
   PF12349.3  52 dnmfllvkavqrtskslsveeriaealgevgpsilltsltellafligaltdvpavqeFclfaavavlfdFllqitfFvav 132
                 d +  l +a+   +k+ + + ri e + e+g+s++  ++t++ a ++ +l +++    F +f ++ ++f++ +  ++F ++
  MMETSP1325-20131115|4657_1  22 DYVVHLAHAM--VEKDMDLDGRIRESFAEMGVSVFSGMFTSVGASIFLFLCKIQFFFKFGTFLCMTIVFSWTFSNFLFPTL 100
                 5555555555..56666777****************999999887777799**************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       547  (0.0400088); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 762.04
//
Query:       MMETSP1325-20131115|4674_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-10   40.7   0.0      2e-10   40.5   0.0    1.1  1  PF00557.19 Metallopeptidase family M24


Domain annotation for each model (and alignments):
>> PF00557.19  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   1.5e-14     2e-10       2      72 ..      41     116 ..      40     117 .] 0.88

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 1.5e-14
                 HHHHHHHHHHHHHHHHHHH-----BHHHHHHHHHHHHHHTT.....TTCGCS-SCCEEEECCCCE-----S-B--- CS
  PF00557.19   2 lirkAgriaaaaleavlreikpgvterelaalieaalkreg.....akgqafppivasgenaallhytpndrvlkd 72 
                  +r+Ag++a+++le  +  +kpgvt++e++al++a +   g      ++ +fp  v+s +n  ++h++p+dr+l+d
  MMETSP1325-20131115|4674_1  41 ALRRAGQLARKMLELSCFLAKPGVTTNEIDALVHAQIVGAGaypapLNYRGFPKSVCSAVNREICHGIPSDRPLQD 116
                 78************776559**************7745555688889999***********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.88
# Mc/sec: 318.61
//
Query:       MMETSP1325-20131115|4675_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.6   0.3      0.043   13.4   0.2    1.7  1  PF09397.5 Ftsk gamma domain
      0.072   10.2   5.2      0.086   10.0   3.6    1.0  1  PF12128.3 Protein of unknown function (DUF3584)
      0.075   12.3   0.0       0.13   11.5   0.0    1.4  1  PF12641.2 Flavodoxin domain
       0.11   12.0   0.5       0.29   10.7   0.1    1.6  2  PF03978.8 Borrelia burgdorferi REV protein


Domain annotation for each model (and alignments):
>> PF09397.5  Ftsk gamma domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   1.3e-05     0.043      36      61 ..     121     146 ..     119     152 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.3e-05
   PF09397.5  36 nrAarlieqlEeegiVgpaegskpRe 61 
                 nr+ r++e++E++ i g+ +g+++R+
  MMETSP1325-20131115|4675_1 121 NRSRRILEDMENNTIMGAIKGTGRRR 146
                 9*********************9995 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.6   2.5e-05     0.086     292     403 ..      19     133 ..       2     156 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 2.5e-05
   PF12128.3 292 elkeqlrtledelkeasdelnqelsaanakleakeselealeeqkkkfed...kdieklkadldqlpsirseleeveaeldaltekvqdvqekferrkqkikeqleeeleknker 403
                 +  ++ ++ e+el+ea d ++   +   +k  a   ++e le+q+k+  d   +d  ++++   ++  +++ +  + a+l+a+++k++d+   ++ ++  ++++  + le+++++
  MMETSP1325-20131115|4675_1  19 ADLASRDAREAELHEALDGARRTAEMSLEKAGAMAGRVETLEAQHKQQIDtlsNDYVSREQVVAMENLFQETVDRLAARLAAMEDKQEDLAMGHKMDRGTMDNRSRRILEDMENN 133
                 22234556666677777766666666677777788899999999888765222688888999999999************************************99999999887 PP

>> PF12641.2  Flavodoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.7e-05      0.13      37      71 ..     102     136 ..      80     147 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.7e-05
   PF12641.2  37 leeadvvfvGfwvdkGtadeeakkfletlknkkia 71 
                  ++++ +++G  +d+Gt+d++++++le+++n  i+
  MMETSP1325-20131115|4675_1 102 EDKQEDLAMGHKMDRGTMDNRSRRILEDMENNTIM 136
                 35567899***********************9986 PP

>> PF03978.8  Borrelia burgdorferi REV protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.35   1.2e+03      54      75 ..      12      35 ..       6      73 .. 0.58
   2 ?   10.7   0.1   8.4e-05      0.29      60     103 ..      64     111 ..      51     129 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.35
   PF03978.8 54 ekinkLkedl..kdvgnaeleekl 75
                e+i +L  dl  +d+  ael+e l
  MMETSP1325-20131115|4675_1 12 ERIAELLADLasRDAREAELHEAL 35
                556666655533466666666654 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 8.4e-05
   PF03978.8  60 kedlkdvgna.eleeklLaLeslfq...dkLaakLaaLkaakediegl 103
                 k+++  ++n    +e+++a+e+lfq   d+Laa+Laa+   +ed+   
  MMETSP1325-20131115|4675_1  64 KQQIDTLSNDyVSREQVVAMENLFQetvDRLAARLAAMEDKQEDLAMG 111
                 566666777755689**********444589*******9999887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       978  (0.0715331); expected 273.4 (0.02)
Passed bias filter:                      595  (0.0435196); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.88
# Mc/sec: 577.30
//
Query:       MMETSP1325-20131115|4656_1  [L=401]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-07   29.2   0.2      1e-06   28.2   0.1    1.5  1  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.1   7.6e-11     1e-06       4      36 ..     120     152 ..     118     153 .. 0.90

  Alignments for each domain:
  == domain 1    score: 28.2 bits;  conditional E-value: 7.6e-11
                 HHHHHHHH----HHHHHHHHHHTTTSHHHHHHH CS
  PF00627.26   4 eaiqqLreMGfsreeakkALratnnnvErAvey 36 
                 ++  +L++MGf++  a+ AL at+n++E A   
  MMETSP1325-20131115|4656_1 120 AQATELVAMGFEEGVAVAALTATDNDFESALTL 152
                 56789*************************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       745  (0.0544909); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.53
# Mc/sec: 1813.09
//
Query:       MMETSP1325-20131115|4677_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 377.20
//
Query:       MMETSP1325-20131115|4679_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 338.06
//
Query:       MMETSP1325-20131115|4680_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.34s 00:00:00.62 Elapsed: 00:00:00.44
# Mc/sec: 234.19
//
Query:       MMETSP1325-20131115|4681_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.05   13.3   0.9      0.054   13.2   0.6    1.1  1  PF01453.19 D-mannose binding lectin
       0.11   12.6   9.3       0.12   12.6   6.5    1.0  1  PF03229.8  Alphavirus glycoprotein J


Domain annotation for each model (and alignments):
>> PF01453.19  D-mannose binding lectin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.6   7.9e-06     0.054      46      89 ..      16      62 ..       3      73 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 7.9e-06
                STTSTT...EEEEEE--T--CEEE.-GGTEEEEE.TTHH.CCEEEEE CS
  PF01453.19 46 vtsskss.kntravLqdsGnLvlrdssgavlWqS.fdhp.tdtlLpg 89
                ++++ ++ +nt a+ + +G  vlr++s++ + +S  + p t t+Lp+
  MMETSP1325-20131115|4681_1 16 ANANANAnTNTNANANATGRVVLRSNSNTSVGSSsGSTPsTTTILPI 62
                33333334899*************99888888885444458889986 PP

>> PF03229.8  Alphavirus glycoprotein J
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   6.5   1.7e-05      0.12      27      99 ..       5      73 ..       1      75 [] 0.70

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.7e-05
   PF03229.8 27 tgttatvgaanaaavanatganatsaaaastiaatvgapptdstvaaetPgpflptdfalPlviGGlcaltla 99
                +  + +++++na a ana+++  t a+a +t   +  + ++ s   +   g+ ++t   lP+   Gl   t+ 
  MMETSP1325-20131115|4681_1  5 A--EGAATNTNANANANANANTNTNANANATGRVVLRSNSNTS--VGSSSGSTPSTTTILPISFHGLDISTMQ 73
                3..3445555666677777777778877777777666655555..88899999999999**999999777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       711  (0.0520041); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|4682_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.078   13.2   0.1       0.24   11.6   0.0    1.8  2  PF11078.3 Optomotor-blind protein N-terminal region


Domain annotation for each model (and alignments):
>> PF11078.3  Optomotor-blind protein N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.26   3.6e+03      47      62 ..      42      57 ..      35      67 .. 0.69
   2 ?   11.6   0.0   1.8e-05      0.24       7      66 ..     114     174 ..     109     179 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.26
   PF11078.3 47 hhplGaayttaedvvl 62
                hh+ G + t + +v  
  MMETSP1325-20131115|4682_1 42 HHASGGSITGSGNVGT 57
                8888888887777644 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 1.8e-05
   PF11078.3   7 pyfPaaalaalaGsqagghpglyPGalllkl..pphiahPhPhhplGaayttaedvvlaava 66 
                 + f  a++a+++Gs++gg     P +    +  pp  a P    ++ + +t aed + +a a
  MMETSP1325-20131115|4682_1 114 GSFAGASFASFSGSSSGGNVS-MPTTKQTEIdePPSSAPPKRDRSVLTIFTNAEDALRSATA 174
                 67999**********997654.5766655543399999999999***********9876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 855.17
//
Query:       MMETSP1325-20131115|4683_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|4685_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   12.7   0.0      0.058   12.6   0.0    1.0  1  PF10786.4 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)


Domain annotation for each model (and alignments):
>> PF10786.4  Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.3e-06     0.058     155     194 ..       9      48 ..       2      53 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.3e-06
   PF10786.4 155 flalkeylsdtekeeelkleaeedsfllGkliekddleve 194
                   ++k++l d + e +l +e    ++++G ++ +++++ +
  MMETSP1325-20131115|4685_1   9 VEKVKQLLADRKVEADLAKERLTAFWTVGPTLVRKEDDSK 48 
                 5789**************************9999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 235.28
//
Query:       MMETSP1325-20131115|4686_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-05   22.6   5.6    5.4e-05   22.5   3.9    1.0  1  PF04012.7 PspA/IM30 family


Domain annotation for each model (and alignments):
>> PF04012.7  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   3.9     4e-09   5.4e-05      77     135 ..       2      60 ..       1      68 [. 0.94

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 4e-09
   PF04012.7  77 ALtkgeeeLArealaeikslekqaealetqlaqqrsaveqlrkqlealetkieelkakk 135
                 A ++g+++ Are+l+++k+++ ++e++ +q++ +rs ++q+ +++ea +++ +e+++ +
  MMETSP1325-20131115|4686_1   2 AVEAGDDDTAREMLEKRKRAQADLEKKIEQVKLARSRRDQMDGAVEAMARRANEYEQLM 60 
                 7899**************************************************99855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1108  (0.0810415); expected 273.4 (0.02)
Passed bias filter:                      699  (0.0511264); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.43s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|4691_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.4   0.1      0.052   13.2   0.0    1.1  1  PF02600.11 Disulfide bond formation protein DsbB


Domain annotation for each model (and alignments):
>> PF02600.11  Disulfide bond formation protein DsbB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.8e-06     0.052      31      55 ..      45      69 ..      41      71 .] 0.88

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.8e-06
  PF02600.11 31 lePCpLCiyqRiallalalilllal 55
                ++PCpLC   Ri+ ++l + +++ +
  MMETSP1325-20131115|4691_1 45 FTPCPLCDSSRIVTMGLPVTGGVVA 69
                79***************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.61
# Mc/sec: 278.92
//
Query:       MMETSP1325-20131115|4692_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0018   17.4   3.3      0.002   17.3   2.3    1.0  1  PF00520.26 Ion transport protein
  ------ inclusion threshold ------
      0.018   13.3   0.7      0.019   13.2   0.5    1.0  1  PF08016.7  Polycystin cation channel


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   2.3   2.9e-07     0.002      62     121 ..       3      59 ..       1      61 [] 0.77

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 2.9e-07
                 XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS CS
  PF00520.26  62 avlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggk 121
                  vlr +r++R+l ++ r++ l    +++ +   +ll v+   ++ +++++ +g+q+fgg+
  MMETSP1325-20131115|4692_1   3 VVLRQIRLVRFLHYYDRFRLLTATAQAISMVGGPLLGVA---FCYFYAYGFLGMQVFGGY 59 
                 478888888888888888877777777777777776665...566899**********98 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.5   2.8e-06     0.019     304     362 ..       2      60 ..       1      61 [] 0.86

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.8e-06
   PF08016.7 304 llflvllkllkvlrfnktlslftktlsralkellgfalvi.villlayaqlgvllfgsqv 362
                 +++l  ++l+++l +  +++l+t t ++a++ + g  l + + ++ ay++lg+ +fg ++
  MMETSP1325-20131115|4692_1   2 MVVLRQIRLVRFLHYYDRFRLLTAT-AQAISMVGGPLLGVaFCYFYAYGFLGMQVFGGYI 60 
                 89999******************98.67888888888866257999**********9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|4690_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1188.59
//
Query:       MMETSP1325-20131115|4693_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|4696_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|4695_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-15   54.9   0.0    5.9e-15   54.7   0.0    1.0  1  PF00503.15 G-protein alpha subunit
      0.002   17.2   0.5     0.0025   16.9   0.4    1.1  1  PF00025.16 ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.049   12.6   0.1      0.058   12.4   0.1    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
      0.062   12.6   0.1      0.079   12.2   0.1    1.2  1  PF01370.16 NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0   1.7e-18   5.9e-15     187     280 ..       3     120 ..       2     139 .. 0.87

  Alignments for each domain:
  == domain 1    score: 54.7 bits;  conditional E-value: 1.7e-18
                 TTHHHHHSTTXXXXHHHHHHXXXXXXXXEEEEEXX.........................XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEGGGTTXBXSSXTTSBHHHHHHHH CS
  PF00503.15 187 dnleriaspdYvPtddDilrarlkttGiseikfeve........................sktefrlvDvGGqrserkkWipcfedvdaiiFlvslsefdqvlyedesvnrleeSlkl 280
                 d l r+ + dYv t++D+lr+++ +tG+  +++e+                            +++l+D++  r++r+kWi + ++vd+++++v l ++++    ++s+n   e +k+
  MMETSP1325-20131115|4695_1   3 DTLGRVLDYDYVATEEDVLRSHTISTGVVVTEVEMPaegtraagagagagvdedgaggggAIWKMQLYDLATGRNQRRKWIYVVDGVDVLVYVVDLTAYQKAHVMEDSINVCTELIKM 120
                 56789*****************************************************9866899************************************88877777766665543 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.4   7.3e-07    0.0025      59     123 ..      66     135 ..      63     140 .] 0.68

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 7.3e-07
                 EEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHH......HHHHHHHTSGGGTTSEEEEEEE CS
  PF00025.16  59 kftvwDvGGqeklRplWknYfektdavifvvDsadreRleeak......eeLkalleeeelkevallvlaN 123
                 k++++D+   ++ R+ W    + +d++++vvD +  ++ + ++      +eL +++ + + +++ llv+  
  MMETSP1325-20131115|4695_1  66 KMQLYDLATGRNQRRKWIYVVDGVDVLVYVVDLTAYQKAHVMEdsinvcTELIKMIVRYT-ARCRLLVVFT 135
                 799*****9999********************9887765544411111134445554443.4555555544 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.7e-05     0.058      72     122 ..      84     138 ..      66     140 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.7e-05
   PF04670.7  72 eifsnvevliyVfDiesre....leedlekfqeileallqyspeakvfvlihKmD 122
                 ++   v+vl+yV+D +  +    +e++++  +e+++ +++y    ++ v  ++ D
  MMETSP1325-20131115|4695_1  84 YVVDGVDVLVYVVDLTAYQkahvMEDSINVCTELIKMIVRYTARCRLLVVFTRPD 138
                 677889*********9653356799****************99999988877766 PP

>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   2.3e-05     0.079     201     228 ..      74     106 ..      54     114 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 2.3e-05
                 --TT-EEEEEEHHHHHHHHHHHHHSSS...... CS
  PF01370.16 201 gdGtqlRdflyveDvaealllvlehgd.....v 228
                 +  +q+R ++yv D +++l++v++        v
  MMETSP1325-20131115|4695_1  74 TGRNQRRKWIYVVDGVDVLVYVVDLTAyqkahV 106
                 45578*****************98666444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 633.00
//
Query:       MMETSP1325-20131115|4694_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-11   42.7   0.1    5.7e-11   41.7   0.0    1.6  1  PF04117.7 Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   4.2e-15   5.7e-11       3      67 ..      76     140 ..      73     141 .. 0.97

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 4.2e-15
   PF04117.7   3 llegksleeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvnlvslgWntyLSlikn 67 
                 lleg++l+ +kekl + f+p++ka++ ++ + +l+ F+++P+  r     + s+++ +yLS++++
  MMETSP1325-20131115|4694_1  76 LLEGEDLDFVKEKLTNRFVPVMKAELSTFLPYNLVSFSMIPPLIRPFSTGFLSMCFAVYLSIVSH 140
                 79************************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 745.05
//
Query:       MMETSP1325-20131115|4689_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 571.44
//
Query:       MMETSP1325-20131115|4699_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 534.57
//
Query:       MMETSP1325-20131115|4700_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 365.16
//
Query:       MMETSP1325-20131115|4702_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.047   13.8   3.3        1.4    8.9   0.1    2.5  2  PF10768.4 Class II flagellar assembly regulator


Domain annotation for each model (and alignments):
>> PF10768.4  Class II flagellar assembly regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00011       1.4      47      78 ..      14      43 ..       6      54 .. 0.83
   2 ?    4.9   0.3    0.0019        26      22      75 ..     106     157 ..      86     161 .. 0.51

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00011
   PF10768.4 47 aaavagvdALLalQevedplerrrravrrgee 78
                 +a+a+vdAL+al  +ed  err  av+ g+ 
  MMETSP1325-20131115|4702_1 14 RIACAAVDALVALAVEED--ERREEAVADGSA 43
                57899********99999..999999998864 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0019
   PF10768.4  22 agasaFalaeeaaaeeaseaaaasaaaavagvdALLalQeved.plerrrravrr 75 
                 +g+sa a    aa++  +  ++ ++a+      A+L+l +ve  ++ rrrr ++r
  MMETSP1325-20131115|4702_1 106 DGGSATAS---AAENGSDIPRSSHSASVALEAQAVLVLEAVEMvEAARRRRWTQR 157
                 33333333...33333333334444444445579999999955477788887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 1308.01
//
Query:       MMETSP1325-20131115|4705_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.9e-25   87.0   0.0    9.4e-25   86.7   0.0    1.1  1  PF09127.6 Leukotriene A4 hydrolase, C-terminal
  ------ inclusion threshold ------
       0.62    9.8   4.5        3.1    7.5   0.0    2.2  2  PF11240.3 Protein of unknown function (DUF3042)


Domain annotation for each model (and alignments):
>> PF09127.6  Leukotriene A4 hydrolase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.7   0.0   1.4e-28   9.4e-25      67     143 .]       2      79 ..       1      79 [. 0.96

  Alignments for each domain:
  == domain 1    score: 86.7 bits;  conditional E-value: 1.4e-28
                 --HHHHHHHHHHHHHTT-G..GGHHHHHHH------HHHH----HHHHT.T-HHHHHHHHHHHGGGS-HHHHHHHHHHT CS
   PF09127.6  67 kNaEikfrwlrlairakye..evlpevakflgsvgRmkfvrPlYraLakeedkelAietFekakdfyHpicralvekdL 143
                 kN+E++f+w+ +++r++y+  + +++v +f++++gRmkf+rPlYr+L+  ++ +lA++tFe +k+ yHpic+++v++dL
  MMETSP1325-20131115|4705_1   2 KNSELRFKWVVMCMRCGYTpqSIIDDVVNFATTQGRMKFTRPLYRELVL-VAPDLAVSTFEAHKNVYHPICKKMVKADL 79 
                 8*****************855789*************************.***************************98 PP

>> PF11240.3  Protein of unknown function (DUF3042)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0   0.00046       3.1      19      38 ..      55      74 ..      48      79 .. 0.84
   2 ?    2.4   1.6     0.018   1.3e+02       8      28 ..     109     128 ..     109     130 .] 0.61

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00046
   PF11240.3 19 vAgavlafKkkviePieeke 38
                +A + + ++k+v+ Pi +k 
  MMETSP1325-20131115|4705_1 55 LAVSTFEAHKNVYHPICKKM 74
                6778999*********9986 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.018
   PF11240.3   8 flvGvlatvaavAgavlafKk 28 
                 fl+G  + vaa+A+ v+ f+k
  MMETSP1325-20131115|4705_1 109 FLIGIGVAVAAAAAFVV-FRK 128
                 67887777777665554.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       717  (0.0524429); expected 273.4 (0.02)
Passed bias filter:                      601  (0.0439585); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 610.84
//
Query:       MMETSP1325-20131115|4707_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.46s 00:00:00.70 Elapsed: 00:00:00.59
# Mc/sec: 251.82
//
Query:       MMETSP1325-20131115|4706_1  [L=454]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-20   72.6  10.2    2.7e-20   72.4   6.2    1.6  2  PF00520.26 Ion transport protein
  ------ inclusion threshold ------
      0.017   13.4   5.2      0.023   12.9   3.6    1.2  1  PF08016.7  Polycystin cation channel
       0.23   11.0   4.2       0.73    9.4   1.0    2.4  2  PF07871.6  Protein of unknown function (DUF1658)


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.36   1.7e+03     136     158 ..     252     274 ..     215     279 .. 0.71
   2 !   72.4   6.2   5.9e-24   2.7e-20       7     166 ..     300     441 ..     298     449 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.36
                 ----HHHHH-XXXXXXXXXXXXX CS
  PF00520.26 136 nngntnfdtfgeafltlfrlmtg 158
                 + g+  f+t+++ ++ ++ + tg
  MMETSP1325-20131115|4706_1 252 VVGTRLFSTYISMVIIVVGISTG 274
                 45566666666666666666665 PP

  == domain 2    score: 72.4 bits;  conditional E-value: 5.9e-24
                 XXXXXXXXXXXXXXXXXXXXXXXXX...XXXX.XXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXX CS
  PF00520.26   7 tiiftlemllkiialgfklkftylr...dpwnilDflvvlpslvslilrllnkasgllavlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvkekagenpnngntnfdtfgeafltlfrlmtgegwgdlmy 166
                 ++if+ e++lk++++    ++++++    ++n +Df vv++s v +  ++ +     + ++rl+r+lRll l++ i++lr+++i l++ ++a  +++lll++v++ fai+g  +fg++                +  +f +++ea+l+lf+++t  +w+++ +
  MMETSP1325-20131115|4706_1 300 FVIFAAECMLKLLSESTR-PWEFFQgddGFFNTFDFGVVVVSCVFFGSESSQ----AVVIVRLVRLLRLLSLVRGIPELRVIIIGLVQGIAAVKYIVLLLFLVIYLFAILGRVIFGDN----------------DPHHFGSIPEAMLFLFQIATLSSWNTIAA 441
                 68***********99974.99999843359************7766665555....699*********************************************************96................689**********************9975 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.6   5.1e-06     0.023     253     386 ..     300     437 ..     235     450 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.1e-06
   PF08016.7 253 vvlsvvvivlailrevlakkllkkvvaekedFldFrevarl.dqll..riilavllflvllkllkvlrfnktlslftktlsralkellgfalvivillla...yaqlgvllfgsqvd.nfsnlvksiltlfrlllgafsyt 386
                 +v++++ ++l +l  ++ ++ ++++  ++  F  F+    + + ++    ++  ++++ l++ll++l++++ +  +   +   +++++++  ++++l+l+   +a+lg ++fg + +  f ++ +++l lf++   + s++
  MMETSP1325-20131115|4706_1 300 FVIFAAECMLKLL--SESTRPWEFFQGDDGFFNTFDFGVVVvSCVFfgSESSQAVVIVRLVRLLRLLSLVRGIPELRVIIIGLVQGIAAVKYIVLLLFLViylFAILGRVIFGDNDPhHFGSIPEAMLFLFQIATLS-SWN 437
                 5555555555554..445666777766666666666432220222211344556788999**********9999999999888888888877766666652227899999***8875279**********8876554.344 PP

>> PF07871.6  Protein of unknown function (DUF1658)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.0   0.00016      0.73       9      22 ..      85      98 ..      84     101 .. 0.91
   2 ?    1.5   0.0     0.048   2.2e+02      14      24 ..     406     417 ..     399     420 .. 0.70

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00016
   PF07871.6  9 lafprrPlhGndgp 22
                +++p++P hG++ +
  MMETSP1325-20131115|4706_1 85 PSRPCAPMHGSGSH 98
                89*********976 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.048
   PF07871.6  14 rPlhG.ndgpft 24 
                 r++ G nd++++
  MMETSP1325-20131115|4706_1 406 RVIFGdNDPHHF 417
                 66666489***8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       655  (0.0479081); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.55s 00:00:01.17 Elapsed: 00:00:00.59
# Mc/sec: 1843.98
//
Query:       MMETSP1325-20131115|4710_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|4708_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 652.62
//
Query:       MMETSP1325-20131115|4711_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       636  (0.0465184); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.32s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 1210.79
//
Query:       MMETSP1325-20131115|4718_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-53  179.1   0.0    8.6e-53  179.0   0.0    1.0  1  PF01268.14 Formate--tetrahydrofolate ligase


Domain annotation for each model (and alignments):
>> PF01268.14  Formate--tetrahydrofolate ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.0   0.0   6.3e-57   8.6e-53     416     557 .]       1     143 []       1     143 [] 0.98

  Alignments for each domain:
  == domain 1    score: 179.0 bits;  conditional E-value: 6.3e-57
  PF01268.14 416 avelAekvveavleekesefkllyeeeasleekietiakeiYgaeevelseeakkklkelekqgldklpvciaKtqySlsddpklkgapkgftlpvrevrlsaGagfivalageimtmPGlpkkpaaekidid.eegeieGlf 557
                 a++lA++vv+a+  ++ ++fk+ly+ ++s+++kieti+keiYga++ e+s++a+++++ ++++g+d+lp+c+aKtqySls+d+k kg+p+gft+p+re+r+s+Gagf++++++++mt+PGl+++p++ ++did e+g++ Glf
  MMETSP1325-20131115|4718_1   1 AKKLAQAVVDACEASSVDDFKYLYDLNTSIKSKIETICKEIYGADGCEFSDKANEQIEAYTAAGYDNLPICMAKTQYSLSTDAKRKGVPTGFTIPIREIRASVGAGFLYPICADMMTVPGLATRPGFFDVDIDtETGRVIGLF 143
                 579*********999999*******************************************************************************************************************999*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.69
# Mc/sec: 496.64
//
Query:       MMETSP1325-20131115|4719_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.061   12.8   0.0      0.065   12.7   0.0    1.0  1  PF01215.14 Cytochrome c oxidase subunit Vb


Domain annotation for each model (and alignments):
>> PF01215.14  Cytochrome c oxidase subunit Vb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.7e-06     0.065      64      99 ..      14      51 ..       3      57 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.7e-06
                --S--B-----TSS-C..EEEESSSCEEE----STT-S CS
  PF01215.14 64 dikaldaskGtlkdPi..lvesiddkRivgCtgseaes 99
                ++ ++d+s Gt++dP   lv++id   iv  t++eae 
  MMETSP1325-20131115|4719_1 14 NMTVVDTSAGTITDPYtgLVTAIDGTPIVVATAEEAET 51
                68999**********7669**************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|4721_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 544.17
//
Query:       MMETSP1325-20131115|4725_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 507.70
//
Query:       MMETSP1325-20131115|4726_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   12.7   1.7        0.2   11.7   1.2    1.5  1  PF12666.2 PrgI family protein


Domain annotation for each model (and alignments):
>> PF12666.2  PrgI family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.2   1.5e-05       0.2      28      81 ..      60     120 ..      55     129 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.5e-05
   PF12666.2  28 avlvgvgvflllrlylg.......tsialilmilvvlpfallafykkkglkfekylkaiik 81 
                  v ++++v+ l+++yl          i ++l+++ ++ ++ll + k + ++f k++k + k
  MMETSP1325-20131115|4726_1  60 PVPIAMLVMYLVHDYLPngdmpetFAIGCVLLLVSMALAMLLVWLKFSVVTFAKVVKIVPK 120
                 567888999999****6667776677888888899999*****************998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1147.49
//
Query:       MMETSP1325-20131115|4714_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-55  185.6   0.0    4.3e-55  185.4   0.0    1.1  1  PF00071.17 Ras family
    9.9e-19   67.8   0.0    1.8e-18   67.0   0.0    1.4  1  PF08477.8  Miro-like protein
    6.5e-08   31.8   0.0      9e-08   31.4   0.0    1.2  1  PF00025.16 ADP-ribosylation factor family
    3.5e-05   23.1   0.0    0.00032   20.0   0.0    1.9  2  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
       0.11   11.3   0.0       0.13   11.0   0.0    1.1  1  PF07034.6  Origin recognition complex (ORC) subunit 3 N-terminus


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.4   0.0   1.6e-58   4.3e-55       1     160 [.       5     176 ..       5     178 .. 0.98

  Alignments for each domain:
  == domain 1    score: 185.4 bits;  conditional E-value: 1.6e-58
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHH.HHHHHHHHHSTTTSSEEEE---TTGGG............G-SS-HHHHHHHHHHTT.EEE---BTTTTTTHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvk.kwveeikrvaeenvpivLvGnKvDlee............kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 K+v+vGd+avGKt+ll++++++ F+ ey++T+ +d+y+++++vdgk ++l +wDTAGqe++++lr+l+y +++++ll+++its  sfenv+ kw+ eik++a++ vp++LvG+K Dl++            +  v+++ g + a+elg +k+le+SA t+++++++f+e++r +
  MMETSP1325-20131115|4714_1   5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITSPPSFENVSsKWWPEIKHHAPK-VPFILVGTKLDLRDdqttierlrqkhQTPVQNSVGTAKAQELGaFKYLECSALTQDGLKQVFDEAIRCV 176
                 89******************************.**********************************************************9***********6.*************************999***************9********************99866 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0   6.6e-22   1.8e-18       1     119 []       5     118 ..       5     118 .. 0.90

  Alignments for each domain:
  == domain 1    score: 67.0 bits;  conditional E-value: 6.6e-22
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 k+vvvGd  vGK+ ll ++++  fp    + ++  d+++   + vd++   l lwd++g+e+ ++  +l   ++d++ll +++t++ s+e+vs+   w +e++  + k+p ilvg+klD
  MMETSP1325-20131115|4714_1   5 KCVVVGDGAVGKTCLLISYTTNAFP--GEYIPTVFDNYS-ANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITSPPSFENVSSK--WWPEIKHHAPKVPFILVGTKLD 118
                 89***********************..555555555555.35689999999**************77777**********************988..********************98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   3.3e-11     9e-08      13     170 ..       2     171 ..       1     176 [. 0.83

  Alignments for each domain:
  == domain 1    score: 31.4 bits;  conditional E-value: 3.3e-11
                 SEEEEEEE--TT---HHHHHHHHHS-EE.EE-S--S-EEE.EEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST..........SSSEEEEEEBTTTTB--HHHHHH CS
  PF00025.16  13 kelrilllGLDnaGKtTilkklkleelv.ttvPTigfnve.elei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelk.........gkrkleiqkcsavkgeglkeglew 170
                 ++++++++G  + GKt +l  ++++ +  + +PT+  n   ++++  k +++ +wD  Gqe   +l    +++td+ + +   +    +e+ +++    ++++   +v++++++ K Dl+++ ++ e  ++ + + ++             ++  +csa++++glk+ ++ 
  MMETSP1325-20131115|4714_1   2 QNIKCVVVGDGAVGKTCLLISYTTNAFPgEYIPTVFDNYSaNVMVdgKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITSPPSFENVSSKWWPEIKHH-APKVPFILVGTKLDLRDDQTTIERLRQKHQTPVQnsvgtakaqELGAFKYLECSALTQDGLKQVFDE 171
                 689******9999************996269***988864255555599*************9999999***********************99998877765.568**************99988887777777766555555332334567789*********999875 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.076   2.1e+02       3      21 ..       3      21 ..       1      31 [. 0.83
   2 !   20.0   0.0   1.2e-07   0.00032      64     185 ..      47     175 ..      34     178 .. 0.76

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.076
                EEEEEEEESTT---HHHHH CS
  PF00009.22  3 irnigiighvDhGKtTltd 21
                ++ ++++g+   GKt+l+ 
  MMETSP1325-20131115|4714_1  3 NIKCVVVGDGAVGKTCLLI 21
                6889************975 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 1.2e-07
                 ET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-..S-HHHHHHHHHHHHT..T--EEEEEE-TTST..CHHHHHHHHHHHHHHHHHCTTGCT...CGEEEEEE-STCCHHHHHHHHHHHHH CS
  PF00009.22  64 eketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG..vepqTeevlrlakkl..gvkiivviNKiDrv..eaeleeiveelkekllekylekge...eevpvvpgSalkgegidaLleaivel 185
                 +  +k  ++ l Dt G +d+ +    +  ++D+ +l ++ +     e+ + + +  +k +  +v++i+v +K+D+   ++ +e++ ++ ++ + +++++ +      ++ + +Sal+++g++++++  +++
  MMETSP1325-20131115|4714_1  47 D--GKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITSPpsFENVSSKWWPEIKHHapKVPFILVGTKLDLRddQTTIERLRQKHQTPVQNSVGTAKAqelGAFKYLECSALTQDGLKQVFDEAIRC 175
                 4..667778889****************************9886678889999998887622566**********998444444444444444222322222444789***************99988876 PP

>> PF07034.6  Origin recognition complex (ORC) subunit 3 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.9e-05      0.13      81     156 ..     101     189 ..      74     201 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 4.9e-05
   PF07034.6  81 skvkareiptaalltgvnvtDheltFesLtesLkksvtahVvlLqskdlsa.............lkaalekllrqlveeksdveeeeee 156
                  k +a ++p  ++ t ++  D+++t e L ++ +  v+  V   ++++l a             lk+++++ +r +++ +++++++++ 
  MMETSP1325-20131115|4714_1 101 IKHHAPKVPFILVGTKLDLRDDQTTIERLRQKHQTPVQNSVGTAKAQELGAfkylecsaltqdgLKQVFDEAIRCVISTTASQKSKKKS 189
                 3444588999999999***********************************99999999999999999998888888888877766544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.57
# Mc/sec: 880.04
//
Query:       MMETSP1325-20131115|4727_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 470.40
//
Query:       MMETSP1325-20131115|4717_1  [L=512]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-10   40.1   0.6    4.1e-10   39.0   0.4    1.6  1  PF02209.14 Villin headpiece domain
    2.6e-09   36.4   2.7    1.7e-06   27.4   0.3    2.5  2  PF13414.1  TPR repeat
    1.2e-08   35.2   3.5    4.8e-08   33.3   0.7    2.6  2  PF13432.1  Tetratricopeptide repeat
    1.1e-06   28.2   2.1      0.032   14.2   0.1    3.7  3  PF13431.1  Tetratricopeptide repeat
    1.4e-06   27.6   8.3       0.02   14.6   0.0    4.3  4  PF07719.12 Tetratricopeptide repeat
    1.6e-06   27.8   2.2     0.0024   17.6   0.3    2.4  2  PF13424.1  Tetratricopeptide repeat
    1.5e-05   24.2   4.8      0.029   13.8   0.0    3.7  3  PF00515.23 Tetratricopeptide repeat
    7.1e-05   22.8   5.4      0.019   15.2   0.0    4.3  4  PF13174.1  Tetratricopeptide repeat
    0.00013   22.1   1.4    0.00082   19.6   0.1    2.7  2  PF13428.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.025   14.2   6.2        0.4   10.4   0.1    3.8  4  PF13181.1  Tetratricopeptide repeat
      0.041   13.5   0.0      0.089   12.5   0.0    1.4  1  PF14004.1  Protein of unknown function (DUF4227)
      0.084   12.6   2.2        1.1    9.0   0.4    2.8  3  PF13371.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.4   3.6e-13   4.1e-10       1      36 []     477     512 .]     477     512 .] 0.99

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 3.6e-13
                 GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT-- CS
  PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgLF 36 
                 Y s+e+F+ v g tk+++   P+WK+ + Kkk+gLF
  MMETSP1325-20131115|4717_1 477 YMSEEEFQAVMGTTKDAWLLVPKWKRANAKKKKGLF 512
                 99********************************** PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.3   1.5e-09   1.7e-06       7      66 ..      17      75 ..      14      78 .. 0.93
   2 !    8.5   0.1    0.0012       1.3      33      51 ..      80      98 ..      78     117 .. 0.82

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 1.5e-09
   PF13414.1  7 kelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66
                ++++ al+ ++++de+  ++++ ++l p+++++y +l+++ l+l  ++e A+e ++ Al 
  MMETSP1325-20131115|4717_1 17 FNKALALLDLNRLDESMTLLKRIIKLYPDYWKAYEALGQLALMLE-QWELAVEVLSVALD 75
                799*****************************************7.68*****9998885 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0012
   PF13414.1 33 dpnnaelyynlAlaylklg 51
                 p+ a+l ynl+ ay+klg
  MMETSP1325-20131115|4717_1 80 TPDKADLVYNLGIAYYKLG 98
                6999**************9 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.7   4.2e-11   4.8e-08       2      61 ..      18      77 ..      17      84 .. 0.92
   2 ?    2.5   0.1      0.19   2.2e+02      27      50 ..      80     103 ..      77     103 .. 0.85

  Alignments for each domain:
  == domain 1    score: 33.3 bits;  conditional E-value: 4.2e-11
   PF13432.1  2 alArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalala 61
                 +A+all+++++de   +l+++++l+P+++ a+ +l++++l+l +++ A+++l  al+++
  MMETSP1325-20131115|4717_1 18 NKALALLDLNRLDESMTLLKRIIKLYPDYWKAYEALGQLALMLEQWELAVEVLSVALDGD 77
                78*******************************************************654 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.19
   PF13432.1  27 aPeaaeallllaeallrlgrldeA 50 
                  P+ a+  ++l+ a+++lg  +eA
  MMETSP1325-20131115|4717_1  80 TPDKADLVYNLGIAYYKLGIAAEA 103
                 4999**************988776 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.15   1.8e+02      15      31 ..      15      31 ..      14      33 .. 0.88
   2 !   14.2   0.1   2.8e-05     0.032       1      33 [.      35      67 ..      35      68 .. 0.93
   3 !    8.8   0.0    0.0016       1.8       9      27 ..      80      98 ..      73     105 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.15
   PF13431.1 15 aynnLAelllnnGdlee 31
                 ++n+A++ll++++l+e
  MMETSP1325-20131115|4717_1 15 IMFNKALALLDLNRLDE 31
                589**********9987 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 2.8e-05
   PF13431.1  1 lyekaleldPnnadaynnLAelllnnGdleeAe 33
                l+++ ++l+P+++ ay +L++l l + ++e A 
  MMETSP1325-20131115|4717_1 35 LLKRIIKLYPDYWKAYEALGQLALMLEQWELAV 67
                5799*************************9986 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.0016
   PF13431.1  9 dPnnadaynnLAelllnnG 27
                 P+ ad+ +nL+ +++++G
  MMETSP1325-20131115|4717_1 80 TPDKADLVYNLGIAYYKLG 98
                59**************999 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.8e-05      0.02       4      34 .]      16      46 ..      14      46 .. 0.94
   2 !    7.3   0.1    0.0039       4.4       2      28 ..      48      74 ..      47      75 .. 0.89
   3 !    7.7   0.3    0.0028       3.2       2      20 ..      85     103 ..      84     105 .. 0.85
   4 ?   -1.1   0.0       1.9   2.2e+03      19      30 ..     138     149 ..     137     151 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.8e-05
                HHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  4 lynlGlayyklgdyeeAleafekAleldPnn 34
                 +n +la++ l++++e   ++++ ++l+P++
  MMETSP1325-20131115|4717_1 16 MFNKALALLDLNRLDESMTLLKRIIKLYPDY 46
                79***************************85 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0039
                HHHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAl 28
                +a+ +lG++++ l ++e A+e +  Al
  MMETSP1325-20131115|4717_1 48 KAYEALGQLALMLEQWELAVEVLSVAL 74
                799*****************9887666 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0028
                 HHHHHHHHHHHHTT-HHHH CS
  PF07719.12   2 ealynlGlayyklgdyeeA 20 
                 ++ ynlG ayyklg  +eA
  MMETSP1325-20131115|4717_1  85 DLVYNLGIAYYKLGIAAEA 103
                 5679**********88887 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHH CS
  PF07719.12  19 eAleafekAlel 30 
                 +A++a+++ l+l
  MMETSP1325-20131115|4717_1 138 KARDAMNELLRL 149
                 8*********98 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0006      0.69      42      77 ..       9      44 ..       3      45 .. 0.80
   2 !   17.6   0.3   2.1e-06    0.0024       6      64 ..      48     102 ..      44     105 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0006
   PF13424.1 42 hpdtaralnnlanlylalgdydeAleylekAleiae 77
                ++ t  +++n a ++l l+++de+  +l++ +++++
  MMETSP1325-20131115|4717_1  9 NGATRIIMFNKALALLDLNRLDESMTLLKRIIKLYP 44
                556677889999999999999999999999999885 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 2.1e-06
   PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdyde 64 
                 +++  l+++ ++l++++ A e +  al+      ++ pd a++ +nl+++y++lg  +e
  MMETSP1325-20131115|4717_1  48 KAYEALGQLALMLEQWELAVEVLSVALDGD----RATPDKADLVYNLGIAYYKLGIAAE 102
                 678889999999999999998888888884....256899*************996555 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   2.6e-05     0.029       5      34 .]      17      46 ..      14      46 .. 0.95
   2 ?    2.7   0.1     0.085        97       2      22 ..      48      68 ..      47      71 .. 0.90
   3 !    7.8   0.2     0.002       2.2       5      15 ..      88      98 ..      84     103 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2.6e-05
                HHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  5 ynlGnaylklgkydeAleyyekALelnPnn 34
                +n+++a+l l+++de     ++ ++l+P++
  MMETSP1325-20131115|4717_1 17 FNKALALLDLNRLDESMTLLKRIIKLYPDY 46
                8***************************97 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.085
                HHHHHHHHHHHHTT-HHHHHH CS
  PF00515.23  2 kalynlGnaylklgkydeAle 22
                ka+  lG++ l l++++ A+e
  MMETSP1325-20131115|4717_1 48 KAYEALGQLALMLEQWELAVE 68
                78899**************97 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.002
                HHHHHHHHHTT CS
  PF00515.23  5 ynlGnaylklg 15
                ynlG ay+klg
  MMETSP1325-20131115|4717_1 88 YNLGIAYYKLG 98
                9*********9 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.7e-05     0.019       3      32 ..      16      45 ..      15      46 .. 0.96
   2 ?    0.8   0.1      0.69   7.8e+02       6      24 ..      53      71 ..      48      75 .. 0.79
   3 ?    5.8   0.1     0.017        19       4      21 ..      88     105 ..      85     127 .. 0.80
   4 ?   -1.2   0.0       2.8   3.2e+03      18      28 ..     138     148 ..     130     149 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.7e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  3 lyklalsyyklgdtdeAlealerlikeyPd 32
                +++ al+++ l++ de++++l+r+ik yPd
  MMETSP1325-20131115|4717_1 16 MFNKALALLDLNRLDESMTLLKRIIKLYPD 45
                899*******99*****************9 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.69
                HHHHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAleale 24
                l+++ ++l +++ A+e+l 
  MMETSP1325-20131115|4717_1 53 LGQLALMLEQWELAVEVLS 71
                799999977*****99986 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyklgdtdeAle 21 
                 y+l+ +yyklg ++eA +
  MMETSP1325-20131115|4717_1  88 YNLGIAYYKLGIAAEADR 105
                 99*******988888765 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 2.8
                 HHHHHHHHHHH CS
   PF13174.1  18 eAlealerlik 28 
                 +A++a+++l++
  MMETSP1325-20131115|4717_1 138 KARDAMNELLR 148
                 8******9986 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.1   7.2e-07   0.00082       8      44 .]      20      56 ..      17      56 .. 0.96
   2 ?    6.2   0.2     0.015        17       2      41 ..      48      90 ..      47      93 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 7.2e-07
   PF13428.1  8 arallalGdpdeAiallrralalaPddaealllLarl 44
                a all+l+++de + ll+r+++l+Pd + a+ +L++l
  MMETSP1325-20131115|4717_1 20 ALALLDLNRLDESMTLLKRIIKLYPDYWKAYEALGQL 56
                789********************************97 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.015
   PF13428.1  2 eallalarallalGdpdeAiallrrala...laPddaealllL 41
                +a+ al+++ l l++++ A+++l  al    + Pd a++ ++L
  MMETSP1325-20131115|4717_1 48 KAYEALGQLALMLEQWELAVEVLSVALDgdrATPDKADLVYNL 90
                68999******************99986333456666666665 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00035       0.4       5      34 .]      17      46 ..      15      46 .. 0.94
   2 ?    4.0   0.0      0.04        46       2      24 ..      48      70 ..      48      79 .. 0.83
   3 ?    0.2   0.1      0.62   7.1e+02       4      15 ..      87      98 ..      84     103 .. 0.85
   4 ?   -3.2   0.0       7.7   8.8e+03      19      32 ..     138     151 ..     138     153 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00035
                TT---HHHHTT-HHHHHHHHH---HHHH.H CS
   PF13181.1  5 ynlGdiYrqlGdydkAkeylekalelkprn 34
                +n+++++++l++ d+++  l+++++l p++
  MMETSP1325-20131115|4717_1 17 FNKALALLDLNRLDESMTLLKRIIKLYPDY 46
                89************************9976 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.04
                --TTT---HHHHTT-HHHHHHHH CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeyl 24
                kay +lG++ + l ++++A e l
  MMETSP1325-20131115|4717_1 48 KAYEALGQLALMLEQWELAVEVL 70
                57889999999999999998865 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 0.62
                TTT---HHHHTT CS
   PF13181.1  4 yynlGdiYrqlG 15
                 ynlG +Y +lG
  MMETSP1325-20131115|4717_1 87 VYNLGIAYYKLG 98
                699*****9998 PP

  == domain 4    score: -3.2 bits;  conditional E-value: 7.7
                 HHHHHHH---HHHH CS
   PF13181.1  19 kAkeylekalelkp 32 
                 kA  ++++ l l  
  MMETSP1325-20131115|4717_1 138 KARDAMNELLRLRE 151
                 78899999999876 PP

>> PF14004.1  Protein of unknown function (DUF4227)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.8e-05     0.089      33      56 ..     349     372 ..     346     380 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.8e-05
   PF14004.1  33 syhrYdePeGsAvkvvqeeeeeds 56 
                  y+ Y  P+GsA+kvv++ ++ ++
  MMETSP1325-20131115|4717_1 349 AYNVYGRPNGSAIKVVEKTNSGRD 372
                 6899*************9998744 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.4   0.00096       1.1       9      64 ..      27      82 ..      19      87 .. 0.83
   2 ?    3.6   0.0     0.048        54      26      48 ..      81     103 ..      78     104 .. 0.91
   3 ?   -3.1   0.0       5.9   6.7e+03       2      13 ..     474     485 ..     473     488 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00096
   PF13371.1  9 edferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapd 64
                ++ ++ +  + r++ l Pd +  +   G l   l++++ A+e L+ +l+ ++  pd
  MMETSP1325-20131115|4717_1 27 NRLDESMTLLKRIIKLYPDYWKAYEALGQLALMLEQWELAVEVLSVALDGDRATPD 82
                56677778899**********************************99976664433 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.048
   PF13371.1  26 PddpyerRDrGlllaqlgclaaA 48 
                 Pd + +++  G+++++lg  a+A
  MMETSP1325-20131115|4717_1  81 PDKADLVYNLGIAYYKLGIAAEA 103
                 99****************88877 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 5.9
   PF13371.1   2 kaiylreedfer 13 
                 +++y++ee+f++
  MMETSP1325-20131115|4717_1 474 RELYMSEEEFQA 485
                 789******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.85u 0.36s 00:00:01.21 Elapsed: 00:00:00.71
# Mc/sec: 1728.08
//
Query:       MMETSP1325-20131115|4729_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-31  107.4   0.0    4.4e-31  107.3   0.0    1.0  1  PF04051.11 Transport protein particle (TRAPP) component


Domain annotation for each model (and alignments):
>> PF04051.11  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.3   0.0   3.2e-35   4.4e-31      25     139 ..       2     118 ..       1     129 [] 0.87

  Alignments for each domain:
  == domain 1    score: 107.3 bits;  conditional E-value: 3.2e-35
  PF04051.11  25 kLeklGyrvGlrliErllarakaskrfkdildvlkfickdlWklvFgkqadnlktnhergeyvlldneppl..sefvelve.ersklsylafvcGiirGaLeslgfkaevtaevsel...r 139
                 k+e++G+ +G r iEr+ +++       d+l+ +kf+ckd+W+ +Fgk +d+l+tnh rg +vl dn++++  +   ++++ +r+    l+f+cG+irGaLe+lg+++ v+a+ s++   +
  MMETSP1325-20131115|4729_1   2 KIESMGHSIGYRFIERIAFQR---MLPADPLELIKFLCKDVWQELFGKPIDKLQTNH-RGVFVLKDNDFKWlaQHSGSEPQfQRAASLLLNFPCGMIRGALENLGIRSLVSADFSPEeasK 118
                 89******************6...8899*****************************.*************75333344677888889*************************99995441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 618.26
//
Query:       MMETSP1325-20131115|4730_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       740  (0.0541252); expected 273.4 (0.02)
Passed bias filter:                      523  (0.0382534); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 401.02
//
Query:       MMETSP1325-20131115|4728_1  [L=586]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-09   35.7  13.9    1.1e-08   34.7   0.2    2.8  3  PF01554.13 MatE


Domain annotation for each model (and alignments):
>> PF01554.13  MatE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.2     8e-13   1.1e-08      56     155 ..       2     100 ..       1     107 [. 0.95
   2 !    9.0   1.7   6.3e-05      0.85       6      49 ..     228     271 ..     224     279 .. 0.81
   3 ?   -2.9   0.2       0.3   4.1e+03     122     152 ..     411     441 ..     397     459 .. 0.60

  Alignments for each domain:
  == domain 1    score: 34.7 bits;  conditional E-value: 8e-13
  PF01554.13  56 vgqalGagnperakvsvrvtvilsllisvviailillfredilslftedeevlklaakylrililgipllslqlvlsgvlrgagdtkpplyinlislyll 155
                 +g+a+G+++++ ++v vr++++l+l+++ ++  +++l+r  ++ l++ + +v+ +a  y  + +l +p+ +l+ v+ g+l g+++ ++++ +n+ ++ ++
  MMETSP1325-20131115|4728_1   2 TGKAVGEKDWRLVGVRVRQALFLALVCGGAAGGVTMLLRSAVFGLMGLKSDVRDAAGVYWWLRCLMVPAVFLSKVVLGALTGCKHLMAVTCLNVGRA-AI 100
                 6899**************************************************************************************9999887.65 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 6.3e-05
  PF01554.13   6 qllqvlsslidtlvvgrlgasalaavsialsilsfifipllglg 49 
                 +l+ ++s  ++ + +g lg+ alaa+++ + +++++ +++ g++
  MMETSP1325-20131115|4728_1 228 SLCLQTSVWALAVCAGNLGSAALAAHQVLILLWMLTSYVVDGFA 271
                 44555555577899**********************99988875 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 0.3
  PF01554.13 122 ipllslqlvlsgvlrgagdtkpplyinlisl 152
                 +  +sl +++ g l ++++ +++  + li++
  MMETSP1325-20131115|4728_1 411 QMTNSLVFTYDGLLLATQQFRFVRNMFLIGT 441
                 4555555555555555555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.89u 0.38s 00:00:01.27 Elapsed: 00:00:00.64
# Mc/sec: 2194.16
//
Query:       MMETSP1325-20131115|4731_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   21.7   0.0    0.00024   20.7   0.0    1.5  2  PF00334.14 Nucleoside diphosphate kinase


Domain annotation for each model (and alignments):
>> PF00334.14  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.8e-08   0.00024      85     130 ..      42      98 ..       6     102 .. 0.86
   2 ?   -2.3   0.0      0.24   3.2e+03      76      89 ..     148     161 .]     145     161 .] 0.83

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.8e-08
                 HH----STTCS------------G...........GG-SEEE--SHHHHHHHHHHHS CS
  PF00334.14  85 ellGatnpaeaapgtiRgdfavsl...........geNlvHgSdseesaereiklfF 130
                 ++lGat+p++a++g+ R+d  +++           g+N vH+S+s+++a  e   ++
  MMETSP1325-20131115|4731_1  42 KILGATDPTTAEEGSARSDIFKQWkklglksvpntGDNGVHASASPAEALFERMNWL 98 
                 689***************9999998888888888777***********998877665 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.24
                 ---CHHHHHHH--- CS
  PF00334.14  76 genavekvrellGa 89 
                 ++++vek  +++G+
  MMETSP1325-20131115|4731_1 148 AKDVVEKSLKIMGK 161
                 68999999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 756.50
//
Query:       MMETSP1325-20131115|4732_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       100  (0.00731422); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 230.59
//
Query:       MMETSP1325-20131115|4733_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-18   66.1   0.0    1.7e-18   65.4   0.0    1.2  1  PF09735.4 Membrane-associated apoptosis protein


Domain annotation for each model (and alignments):
>> PF09735.4  Membrane-associated apoptosis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.0   1.2e-22   1.7e-18     825    1067 ..       5     257 ..       2     278 .. 0.74

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 1.2e-22
   PF09735.4  825 fsDvkElralvellGpYGvklldeklmvhvasqvaelkklvvenkdvlealrssfdkpdrveallkrlsdvdtvlkrmiiiGqilsFrdllqealrevleekvpfllssiedlkenlp....eedd...kkvilrikelasavGveck.....vDpalvaallaeksepee.eyknsclLlvfvavslptlaaketsay..nielegfsNNiHClakainavvaalfrvsaeaniesrlkeflalassslLklgqetd 1067
                  ++ v E+ al +l+G+YG   l+++l   +      +k  +++n   l++ + +  kpd+ e+  +r+  + + l+ ++ iG++l+ r++++ea+r    + vpf   s+   +  +     ++ d   ++   + +e+a  + + +k      D++ +++ ++     e+ +    ++Ll++   +      ++++a   + e +  +NN+H  a +i +++    +v +     +   e+l +as +lL++g+e  
  MMETSP1325-20131115|4733_1    5 YAGVAEMTALYRLIGGYGFAHLERELLAIIVGHARSIKAFLNTNAGHLNNFKLNYAKPDKWEEGARRVEGMAAFLSHTTVIGNALALRKVMAEAIRRSQRQVVPFASRSLALATLAVGglerGKSDsgsVRAPGSAHEVAEDIELLGKggcglEDTNACTTRRELLVLGENiQELSLWSLLPYAYGAAFLADEWNKAACtaEGEQGVLTNNLHVAALTIHELF----SVYKMG-NTDMHTEYLRVASLILLRIGSEPA 257 
                  77899****************************************************************************************************999887766666531022222000222334566666554433311111344444444444333444488999*****99876666666666655115667789**********99865....553333.3455579*************9954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.55
# Mc/sec: 1280.96
//
Query:       MMETSP1325-20131115|4736_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-07   28.7   0.4    5.4e-05   22.8   0.1    2.8  3  PF02985.17 HEAT repeat
    0.00011   22.2   0.0      0.038   14.1   0.0    1.6  2  PF13646.1  HEAT repeats
  ------ inclusion threshold ------
      0.079   12.1   0.0       0.12   11.6   0.0    1.5  1  PF12348.3  CLASP N terminal


Domain annotation for each model (and alignments):
>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.023     1e+02       2      29 ..      13      40 ..      12      42 .. 0.84
   2 ?   -2.5   0.0       1.6   7.3e+03      10      21 ..      64      75 ..      62      77 .. 0.78
   3 !   22.8   0.1   1.2e-08   5.4e-05       1      30 [.      94     123 ..      94     124 .. 0.96

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.023
                HHHHHHHHTSSSHHHHHHHHHHHHHHHH CS
  PF02985.17  2 lPlllkllnDpspeVReaAaeaLgalae 29
                + +ll+++ D++   Re +++++  la+
  MMETSP1325-20131115|4736_1 13 FEPLLTGFGDTAKVLRELTLKSMLCLAD 40
                56899************99999877776 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.6
                TSSSHHHHHHHH CS
  PF02985.17 10 nDpspeVReaAa 21
                +Dp p+ R a +
  MMETSP1325-20131115|4736_1 64 KDPFPHARLAGI 75
                699999998866 PP

  == domain 3    score: 22.8 bits;  conditional E-value: 1.2e-08
                 HHHHHHHHHTSSSHHHHHHHHHHHHHHHHC CS
  PF02985.17   1 llPlllkllnDpspeVReaAaeaLgalaev 30 
                 +lP l++ll Dp   VReaA+e++  l+ev
  MMETSP1325-20131115|4736_1  94 ILPTLCQLLLDPFGPVREAAFECVQKLLEV 123
                 8**************************997 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   2.6e-05      0.12      26      83 ..      41     113 ..      13     117 .. 0.62
   2 !   14.1   0.0   8.3e-06     0.038       9      58 ..      63     120 ..      52     151 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.6e-05
   PF13646.1  26 qlgseealpaLlelL........kdsdpevRraAaeaLgklg........dpealpaLlklldddedavvreaa 83 
                 +l+++++ ++L+++L        kd+ p  R a ++a + ++        +++ lp+L++ll d+    vreaa
  MMETSP1325-20131115|4736_1  41 KLNERNLNDKLVRALlmapptaxKDPFPHARLAGIRATSSCKsyfdapliTNKILPTLCQLLLDPF-GPVREAA 113
                 455556666666666666666666777777777777777776444445555667777777776543.3346655 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 8.3e-06
   PF13646.1   9 ekdpdpevraaaieaLgqlgse........ealpaLlelLkdsdpevRraAaeaLgkl 58 
                  kdp p+ r+a i+a + ++s         ++lp+L +lL d+   vR+aA e+ +kl
  MMETSP1325-20131115|4736_1  63 XKDPFPHARLAGIRATSSCKSYfdaplitnKILPTLCQLLLDPFGPVREAAFECVQKL 120
                 47999************888877666777788*********************99987 PP

>> PF12348.3  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.6e-05      0.12     164     217 ..      80     134 ..       5     145 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.6e-05
   PF12348.3 164 sdkskleasglldliekslkkgleDanpeVReaaRatfweffkvwPsrAksll.s 217
                 s ks+++a ++ + i ++l ++l D+   VReaa +++ ++ +v   rA ++  +
  MMETSP1325-20131115|4736_1  80 SCKSYFDAPLITNKILPTLCQLLLDPFGPVREAAFECVQKLLEVVQVRAGEMAvE 134
                 4578899999999999************************999999999888654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 783.81
//
Query:       MMETSP1325-20131115|4734_1  [L=369]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-41  140.2   0.0    6.3e-41  139.5   0.0    1.4  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    2.7e-07   31.0   0.1    2.8e-06   27.7   0.0    2.2  2  PF13191.1  AAA ATPase domain
    6.3e-06   26.2   0.0    0.00074   19.5   0.0    2.5  1  PF13401.1  AAA domain
      2e-05   24.1   0.1    0.00027   20.5   0.1    2.7  1  PF07728.9  AAA domain (dynein-related subfamily)
    7.9e-05   21.7   0.0    0.00014   20.8   0.0    1.3  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    0.00012   21.4   0.3     0.0014   17.9   0.1    2.3  2  PF13481.1  AAA domain
     0.0002   21.1   0.0    0.00054   19.7   0.0    1.7  1  PF07724.9  AAA domain (Cdc48 subfamily)
    0.00037   19.8   0.0    0.00067   19.0   0.0    1.4  1  PF01695.12 IstB-like ATP binding protein
    0.00048   19.6   0.1     0.0019   17.7   0.1    2.0  2  PF13245.1  Part of AAA domain
    0.00053   20.6   0.3     0.0014   19.2   0.1    2.1  1  PF13207.1  AAA domain
    0.00064   19.9   0.0      0.002   18.3   0.0    2.0  1  PF13238.1  AAA domain
    0.00067   19.6   0.0     0.0013   18.7   0.0    1.5  1  PF00910.17 RNA helicase
    0.00075   18.3   0.0     0.0016   17.3   0.0    1.5  2  PF05673.8  Protein of unknown function (DUF815)
      0.002   17.2   0.0     0.0035   16.4   0.0    1.4  1  PF01078.16 Magnesium chelatase, subunit ChlI
     0.0032   16.1   0.1     0.0067   15.0   0.0    1.5  1  PF06068.8  TIP49 C-terminus
     0.0035   17.1   0.0     0.0068   16.2   0.0    1.5  1  PF13521.1  AAA domain
     0.0067   16.2   0.0      0.015   15.0   0.0    1.8  1  PF13671.1  AAA domain
     0.0071   15.8   0.0      0.025   14.0   0.0    1.9  2  PF05729.7  NACHT domain
     0.0088   15.8   0.0      0.018   14.8   0.0    1.5  1  PF13173.1  AAA domain
  ------ inclusion threshold ------
       0.01   15.2   0.1       0.02   14.3   0.1    1.4  1  PF13479.1  AAA domain
      0.013   14.9   0.0      0.032   13.7   0.0    1.6  1  PF07726.6  ATPase family associated with various cellular activities (AAA)
      0.015   14.6   0.0      0.035   13.4   0.0    1.6  1  PF01176.14 Translation initiation factor 1A / IF-1
       0.02   14.2   0.0      0.051   12.9   0.0    1.8  1  PF00158.21 Sigma-54 interaction domain
      0.023   13.7   0.1      0.053   12.6   0.0    1.6  1  PF02562.11 PhoH-like protein
      0.024   13.6   0.0       0.11   11.5   0.0    1.9  2  PF06745.8  KaiC
      0.031   13.0   0.0      0.051   12.3   0.0    1.2  1  PF01057.12 Parvovirus non-structural protein NS1
      0.044   12.7   0.0      0.084   11.8   0.0    1.4  1  PF06414.7  Zeta toxin
      0.052   13.2   0.0       0.17   11.5   0.0    1.9  1  PF04851.10 Type III restriction enzyme, res subunit
      0.067   12.7   0.0       0.12   11.9   0.0    1.3  1  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
       0.07   12.6   0.2       0.17   11.3   0.0    1.7  2  PF13604.1  AAA domain
      0.073   12.6   0.0        0.6    9.6   0.0    2.2  1  PF01637.13 Archaeal ATPase
       0.11   12.0   0.0       0.19   11.2   0.0    1.3  1  PF07931.7  Chloramphenicol phosphotransferase-like protein


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.5   0.0   1.5e-43   6.3e-41       1     132 []     150     283 ..     150     283 .. 0.96

  Alignments for each domain:
  == domain 1    score: 139.5 bits;  conditional E-value: 1.5e-43
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE--S CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 vllyGppGtGKTlla+a+a+++ ++fl++ +s +++ky+ges++ ire+f  ak ++ p+++f+DE+da+++sr    +s+++e +r++ +Ll++ldg++   ++v +++atnrpd ldpallr gR+drkiei+l
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAATFLKVVASAIVDKYIGESARIIREMFGFAKDHQ-PCVIFMDEVDAIGGSRfseGTSADREIQRTLMELLNQLDGFEGL-GQVKMVMATNRPDILDPALLRpGRMDRKIEIPL 283
                 79******************************************************9.****************986666888889***************7.66****************************985 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   6.5e-09   2.8e-06      15      64 ..     138     188 ..     133     206 .. 0.84
   2 ?   -0.1   0.0       2.2   9.2e+02     128     157 ..     205     243 ..     188     253 .. 0.68

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 6.5e-09
   PF13191.1  15 alrrvsegsp.lllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllr 64 
                 +++rv    p  +l++Gp+G+GK+ L+r+la +i++  l + a+ +++ + 
  MMETSP1325-20131115|4734_1 138 LFNRVGIKPPkGVLLYGPPGTGKTLLARALASNIAATFLKVVASAIVDKYI 188
                 67888888889******************9999999999998888777665 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 2.2
   PF13191.1 128 trrpklvlvlDD...........lqwadresldlLealler 157
                 ++  ++v++ D+              adre +  L +ll++
  MMETSP1325-20131115|4734_1 205 HQ--PCVIFMDEvdaiggsrfseGTSADREIQRTLMELLNQ 243
                 33..4999999766777777777666666666666666655 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   1.7e-06   0.00074       7      28 ..     150     171 ..     145     265 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 1.7e-06
   PF13401.1   7 lvvtGesGvGKTtllrrlarql 28 
                 ++++G++G+GKT+l+r la++ 
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNI 171
                 799***************9964 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   6.2e-07   0.00027       1      33 [.     149     181 ..     149     271 .. 0.80

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 6.2e-07
                 EEEEE------HHHHHHHGGGGBS--EEEEE-- CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqlt 33 
                 +vlL GppGtgK+ la+ la+ + ++++ v  +
  MMETSP1325-20131115|4734_1 149 GVLLYGPPGTGKTLLARALASNIAATFLKVVAS 181
                 59*******************998888777665 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   3.4e-07   0.00014      52     110 ..     149     215 ..     140     221 .. 0.73

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 3.4e-07
   PF05496.7  52 hvllyGpPGlGkttlakiiakelgve.lkvtsgPvleka.gdlaalltnl......eekdvlfidei 110
                  vllyGpPG Gkt la+ +a+++ ++ lkv ++ +++k  g+ a ++ ++      ++  v+f+de+
  MMETSP1325-20131115|4734_1 149 GVLLYGPPGTGKTLLARALASNIAATfLKVVASAIVDKYiGESARIIREMfgfakdHQPCVIFMDEV 215
                 59********************998735778888888743677777776633332223347777777 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   3.3e-06    0.0014      31      63 ..     146     175 ..     122     186 .. 0.81
   2 ?    0.7   0.0      0.62   2.7e+02     128     170 ..     193     235 ..     184     249 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 3.3e-06
   PF13481.1  31 prgsltllaGapgtGKStlalqlaaavatGepf 63 
                 p+++ +ll+G+pgtGK+ la +la ++a+  +f
  MMETSP1325-20131115|4734_1 146 PPKG-VLLYGPPGTGKTLLARALASNIAA--TF 175
                 5555.89********************95..44 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.62
   PF13481.1 128 adlerllaaieelegpdlvviDtlsrlvgg...densnsdv.gavia 170
                  +++++  ++++ ++p ++  D ++++ g+   +    +++ +++ +
  MMETSP1325-20131115|4734_1 193 RIIREMFGFAKD-HQPCVIFMDEVDAIGGSrfsE---GTSAdREIQR 235
                 57899999****.89*******999998885431...3333233333 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.3e-06   0.00054       6     104 ..     150     242 ..     145     249 .. 0.78

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.3e-06
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT---EEEETGGG----------------HHHHHHHH- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpkessgadvSregVqrdLLqile 104
                 +ll gp g+Gkt+la+ala+ + +    ++  + as++    +     +r i +  g  +  +  ++++DE+d i  ++ s+      ++qr L+ +l 
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAA----TFLKVVASAIVD--KYIGESARIIREMFGFAKDHQPCVIFMDEVDAIGGSRFSEGTSADREIQRTLMELLN 242
                 6899******************95....888888888888..22223355666666777888888***********96444444445699999999986 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.6e-06   0.00067      48      73 ..     148     173 ..     137     187 .. 0.84

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 1.6e-06
  PF01695.12  48 enlvllGpsGvGKthlAialgveavr 73 
                 + ++l Gp+G+GKt lA al+ + + 
  MMETSP1325-20131115|4734_1 148 KGVLLYGPPGTGKTLLARALASNIAA 173
                 689*****************987655 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       8.1   3.5e+03      52      62 ..     119     129 ..     116     137 .. 0.81
   2 !   17.7   0.1   4.5e-06    0.0019      11      35 ..     149     172 ..     140     197 .. 0.75

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 8.1
   PF13245.1  52 graakrlserl 62 
                 ++++++++e++
  MMETSP1325-20131115|4734_1 119 NEQVREMRETI 129
                 689****9998 PP

  == domain 2    score: 17.7 bits;  conditional E-value: 4.5e-06
   PF13245.1  11 pllvvtGgPGtGKTttlaaiiaall 35 
                 + +++ G+PGtGKT ++ a+++ ++
  MMETSP1325-20131115|4734_1 149 G-VLLYGPPGTGKTLLARALASNIA 172
                 4.5569********66666666555 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1   3.3e-06    0.0014       2      23 ..     150     171 ..     150     341 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 3.3e-06
                 E--B--TT---HHHHHHHHHHS CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerl 23 
                 ++++GppG+GK+ la++La   
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNI 171
                 789****************974 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   4.6e-06     0.002       1      23 [.     150     185 ..     150     278 .. 0.73

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 4.6e-06
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl.............g 23 
                 +l+ G+pG+GKt la++La+++              
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIaatflkvvasaivD 185
                 6899***************99876666555543331 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   3.1e-06    0.0013       1      48 [.     150     188 ..     150     218 .. 0.68

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 3.1e-06
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYt 48 
                 ++lyGp+g+GK++la+ La++++ ++          + +++ ++d+Y 
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAATF---------LKVVASAIVDKYI 188
                 689*****************999766.........2223344444444 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.3   3.1e+03     118     131 ..      20      33 ..      18      61 .. 0.57
   2 !   17.3   0.0   3.7e-06    0.0016      51     115 ..     145     214 ..     114     237 .. 0.85

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 7.3
   PF05673.8 118 FeeeeeeyksLksv 131
                 F+e+e++ k+L+sv
  MMETSP1325-20131115|4734_1  20 FNETEDALKALQSV 33 
                 66677777777765 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 3.7e-06
   PF05673.8  51 lpannvLLwGarGtGKSslvkallneyaeegLrlie..vekedlkdlpkivellr...erperfilfvDD 115
                 +p + vLL+G  GtGK  l +al +++a++ L+++   +  + + +  +i++++    + ++ +++f+D 
  MMETSP1325-20131115|4734_1 145 KPPKGVLLYGPPGTGKTLLARALASNIAATFLKVVAsaIVDKYIGESARIIREMFgfaKDHQPCVIFMDE 214
                 56788******************************64477788999888888874333778899999997 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   8.3e-06    0.0035      25      46 ..     150     171 ..     142     197 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 8.3e-06
  PF01078.16  25 lllvGppGsGKtmlakrlpsll 46 
                 +ll+GppG+GKt+la++l+s +
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNI 171
                 89***************98755 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.6e-05    0.0067      51      90 ..     148     185 ..     142     199 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.6e-05
   PF06068.8  51 ravLlaGppgtGktalaiaiskelgedvpfvalsgsevys 90 
                 ++vLl GppgtGkt la a++ +++    f ++++s +  
  MMETSP1325-20131115|4734_1 148 KGVLLYGPPGTGKTLLARALASNIA--ATFLKVVASAIVD 185
                 89**********************9..6789999988765 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.6e-05    0.0068       2      27 ..     150     179 ..     149     206 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.6e-05
   PF13521.1   2 ivitGgpstGKTtlleaLaar....gypvv 27 
                 + + G+p+tGKT l++aLa++      +vv
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNiaatFLKVV 179
                 6799***************76433333344 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.6e-05     0.015       2      28 ..     150     176 ..     150     281 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 3.6e-05
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrl 28 
                 vll G+pG+GK+ la++l+ +  +++l
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAATFL 176
                 7899**************987764444 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   5.9e-05     0.025       3      27 ..     150     174 ..     148     184 .. 0.89
   2 ?   -2.2   0.0       5.8   2.5e+03      73     115 ..     198     242 ..     174     246 .. 0.60

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.9e-05
   PF05729.7   3 vilqGeaGsGKTtLlqklasawakg 27 
                 v+l G++G GKT L++ las +a+ 
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAAT 174
                 799*****************99975 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 5.8
   PF05729.7  73 wivllelperlLlilDglDelvsdlgq..lkekqpvrtlLselir 115
                 +  +++  +  ++++D +D +         +  +++++ L el++
  MMETSP1325-20131115|4734_1 198 MFGFAKDHQPCVIFMDEVDAIGGSRFSegTSADREIQRTLMELLN 242
                 555566677778888888887753322455555666666666665 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   4.2e-05     0.018       4      73 ..     149     218 ..     146     247 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 4.2e-05
   PF13173.1   4 ilvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpellelflek...lke.kkkylflDEiqev 73 
                  ++++Gp ++GKt l++ la++      +l +      ++ + ++  +++++e+   +k+ +  ++f+DE+  +
  MMETSP1325-20131115|4734_1 149 GVLLYGPPGTGKTLLARALASNIA--ATFLKVVASAIVDKYIGES--ARIIREMfgfAKDhQPCVIFMDEVDAI 218
                 689****************98877..7777776666655555554..466666644234446677******987 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   4.8e-05      0.02       6      25 ..     150     169 ..     147     176 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.8e-05
   PF13479.1   6 vliYGkpGiGKTslaktlpk 25 
                 vl+YG+pG+GKT la+ l +
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALAS 169
                 79************998854 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   7.4e-05     0.032       2      30 ..     150     178 ..     149     187 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 7.4e-05
   PF07726.6   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vll g PG++ktll++ala+ + ++f ++
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAATFLKV 178
                 8999*******************999877 PP

>> PF01176.14  Translation initiation factor 1A / IF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.1e-05     0.035       3      52 ..      34      82 ..      32      98 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 8.1e-05
                --BE-EEE--------EEEEE---EEE-------HHHH------EEEE-- CS
  PF01176.14  3 gevigqVtkllGnglfeVeledGkerlahipgKfrkkiwikrGDfVlVel 52
                g++ig V+k l  ++f V+  +G ++++  + K+ k+ + k+G +V  ++
  MMETSP1325-20131115|4734_1 34 GQIIGEVLKQLDENRFIVKASSGPRYVVGCRNKLDKS-KLKPGTRVALDM 82
                8********************************7665.678888887776 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00012     0.051      23      61 ..     148     183 ..     137     261 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.00012
                 S-EEEE-------HHHHHHHHHTSTTTTS--EEEETTTS CS
  PF00158.21  23 ltvlitGesGtGKellAraiheaskrkkkpfvavncaai 61 
                   vl+ G  GtGK+llAra+ ++ +   + f++v  +ai
  MMETSP1325-20131115|4734_1 148 KGVLLYGPPGTGKTLLARALASNIA---ATFLKVVASAI 183
                 679****************987665...44555555544 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00012     0.053      22      43 ..     150     171 ..     142     202 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00012
  PF02562.11  22 vfaiGpaGtGKTylavalavea 43 
                 v++ Gp GtGKT+la ala + 
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNI 171
                 7889***********9999765 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00025      0.11      14      39 ..     142     167 ..     136     179 .. 0.81
   2 ?   -1.7   0.0       2.6   1.1e+03     114     149 ..     205     244 ..     176     246 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00025
   PF06745.8  14 gGipegrvvlitGepGtGKtifalqF 39 
                  Gi   + vl++G pGtGKt++a   
  MMETSP1325-20131115|4734_1 142 VGIKPPKGVLLYGPPGTGKTLLARAL 167
                 58888889**************9765 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 2.6
   PF06745.8 114 ikakrvviDsitgl....yeekeavaReilrqlvrvlkkl 149
                  +   + +D ++++     +e ++  Rei r+l++ l++l
  MMETSP1325-20131115|4734_1 205 HQPCVIFMDEVDAIggsrFSEGTSADREIQRTLMELLNQL 244
                 4555555566666655466777777888888888888776 PP

>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00012     0.051     117     138 ..     150     171 ..     144     180 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00012
  PF01057.12 117 vwfyGpantGktnlaeaIakav 138
                 v++yGp+ tGkt la+a+a  +
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNI 171
                 89****************9875 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0002     0.084      15      43 ..     146     173 ..     135     182 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.0002
   PF06414.7  15 kpkavllgGqpGAGKtslaellleelaag 43 
                  pk vll G+pG GKt la++l   + a 
  MMETSP1325-20131115|4734_1 146 PPKGVLLYGPPGTGKTLLARALASNI-AA 173
                 699******************99887.44 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0    0.0004      0.17      23      63 ..     145     185 ..     114     206 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.0004
  PF04851.10  23 dekkrglivmaTGtGKTlvaasliarlarkflflvprkell 63 
                 +  k +l+  + GtGKTl+a +l++++a  fl +v + ++ 
  MMETSP1325-20131115|4734_1 145 KPPKGVLLYGPPGTGKTLLARALASNIAATFLKVVASAIVD 185
                 5678899999******************9999999877665 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00028      0.12      17      42 ..     149     174 ..     138     195 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00028
  PF02367.12  17 vvlLsGdlGaGKTtlvkglakglgvk 42 
                  vlL G+ G+GKT l+++la+++  +
  MMETSP1325-20131115|4734_1 149 GVLLYGPPGTGKTLLARALASNIAAT 174
                 599******************99765 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       7.6   3.2e+03     164     191 ..      11      36 ..       2      39 .. 0.61
   2 ?   11.3   0.0    0.0004      0.17      21      54 ..     150     183 ..     137     192 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 7.6
   PF13604.1 164 eeeraasealregepeealealadrgrv 191
                 ++ ++a+++++e  +e+al+al+  g++
  MMETSP1325-20131115|4734_1  11 DAVKDAVKEFNE--TEDALKALQSVGQI 36 
                 445555555554..44468888887776 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.0004
   PF13604.1  21 avvqGpAGtGKttvlkalrealeaagkrvvglAp 54 
                 +++ Gp+GtGKt + +al+  ++a+  +vv+ A 
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAATFLKVVASAI 183
                 6778******************999999998885 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0014       0.6      23      61 ..     150     187 ..     139     245 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0014
                 EEEE--TT---HHHHHHHHHH-..---HHHHH------H CS
  PF01637.13  23 iviyGprrsGKTaLlkeileelkekgkrvvyyinlreef 61 
                 +++yGp ++GKT L + ++++     + +v  ++  +++
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNI-AATFLKVVASAIVDKY 187
                 799************9999998.3344444444444444 PP

>> PF07931.7  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00044      0.19       4      40 ..     150     186 ..     148     217 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00044
                 EEE-----------HHHHHHHSSS-EEEE--HHHHHH CS
   PF07931.7   4 ilLnGgsssGKsslaralqevldepwlhlgvDafvea 40 
                 +lL G + +GK+ laral + +++++l++   a v++
  MMETSP1325-20131115|4734_1 150 VLLYGPPGTGKTLLARALASNIAATFLKVVASAIVDK 186
                 89*************************9987666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       563  (0.0411791); expected 273.4 (0.02)
Passed bias filter:                      525  (0.0383996); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                        32  (0.00234055); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.86u 0.35s 00:00:01.21 Elapsed: 00:00:00.63
# Mc/sec: 1403.58
//
Query:       MMETSP1325-20131115|4737_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.2    8.5   4.5        6.3    7.1   3.1    1.7  1  PF13882.1 C-terminal domain of Fibronectin type III


Domain annotation for each model (and alignments):
>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.1   0.00046       6.3       5      73 ..      11      80 ..       8      85 .] 0.65

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00046
   PF13882.1  5 egWFIglvsaiallllillivclikrsrggkysvkekeda..kldpeeqpkkd.eefeeysreedekelkre 73
                ++WF g+++a+a+ ll+     +     +g ++v  +     +++  e+ +++ +++++ s+e++ ke+++ 
  MMETSP1325-20131115|4737_1 11 AQWFTGVIIALAITLLVSQPASMLAM--KGVVPVFTRRLLrrNGNFAERVMEQaQKIHAESQEDEAKEAEKA 80
                68******999888888665554444..57777766665422566666666666777777777776666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1018  (0.0744587); expected 273.4 (0.02)
Passed bias filter:                      665  (0.0486396); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.44s 00:00:00.85 Elapsed: 00:00:00.54
# Mc/sec: 377.20
//
Query:       MMETSP1325-20131115|4738_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 642.22
//
Query:       MMETSP1325-20131115|4742_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        78  (0.00570509); expected 273.4 (0.02)
Passed bias filter:                       74  (0.00541252); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.62
# Mc/sec: 177.79
//
Query:       MMETSP1325-20131115|4743_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0039   16.7   0.3     0.0046   16.4   0.2    1.0  1  PF06791.8 Prophage tail length tape measure protein


Domain annotation for each model (and alignments):
>> PF06791.8  Prophage tail length tape measure protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   3.4e-07    0.0046     109     148 ..       4      45 ..       2      49 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 3.4e-07
   PF06791.8 109 gnaaGvtasqLadmarkisa..vggtqgaaaealtaLaaaGk 148
                 ++a Gvta++La+ ar++      +  g+a ++l++L +aG+
  MMETSP1325-20131115|4743_1   4 AGAGGVTAEELASTARRVVTqgKSTECGTALNVLDKLYDAGR 45 
                 5789***********9987745566679*********99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 206.58
//
Query:       MMETSP1325-20131115|4747_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|4749_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 311.98
//
Query:       MMETSP1325-20131115|4753_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|4752_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.63
# Mc/sec: 281.48
//
Query:       MMETSP1325-20131115|4754_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   27.4   0.0    1.3e-06   27.3   0.0    1.0  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   9.3e-11   1.3e-06     100     156 ..       2      70 ..       1      72 [] 0.91

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 9.3e-11
  PF00248.16 100 lDllllhrpdpslp.........sieevlealeelkkeGkirhiGvSnfsveileka...kkkkkvkiv 156
                 +Dl+++h pd   p           e  ++ l+e+  +G  +++GvSn+++  le+a   + k++v+++
  MMETSP1325-20131115|4754_1   2 VDLMQVHMPDIIQPfarfgvenrREEAHWDGLAECYHSGIAKNVGVSNYGPTLLERAhdhLAKRGVPLA 70 
                 8*********************888889*****************************877777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.60
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|4755_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 216.14
//
Query:       MMETSP1325-20131115|4756_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.62
# Mc/sec: 649.34
//
Query:       MMETSP1325-20131115|4758_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|4760_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 454.48
//
Query:       MMETSP1325-20131115|4745_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 369.04
//
Query:       MMETSP1325-20131115|4759_1  [L=297]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-12   44.6   0.9    1.4e-11   43.9   0.6    1.3  1  PF00134.18 Cyclin, N-terminal domain
    8.9e-09   35.8   0.0    9.6e-09   35.6   0.0    1.3  1  PF08613.6  Cyclin


Domain annotation for each model (and alignments):
>> PF00134.18  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   0.6     2e-15   1.4e-11      25     127 .]     174     286 ..     156     286 .. 0.89

  Alignments for each domain:
  == domain 1    score: 43.9 bits;  conditional E-value: 2e-15
                 S--HHHHHHHHHHHHHHHHCTT--CCCHHHHHHHHHHHHCC-.....--CCCCTT---HHHHHHHCCC-SS---CHHHHCHTTSSS-......CCHHHHHHHHHHHHCTT--- CS
  PF00134.18  25 elnpemrsilidwlvevsekfklspetlylavnyldRflskrs....vkrkklqlvgvtcLllAaKveeirppeledlvyitdgayt......keeilqmErliLstLnfdls 127
                  ++   r+ l d+lv++ ++ + ++e+  la  yl R+l++ +     +r++ +l++++ L++A K+ ++r  +++d+ ++ ++a t       ++++++E +iL++++++l+
  MMETSP1325-20131115|4759_1 174 AVEGDLREDLHDYLVRLYKVCQWTEECNLLAFVYLLRLLANTVapvqLRRDNCKLLMLGTLMIAQKFWDDRSLRNQDMPVAWQRATTgekrvnLKQVNSLEIEILRAIEWELY 286
                 566789***********************************96689999****************************9988866666667777*****************995 PP

>> PF08613.6  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   1.4e-12   9.6e-09      53     149 .]     182     285 ..       9     285 .. 0.82

  Alignments for each domain:
  == domain 1    score: 35.6 bits;  conditional E-value: 1.4e-12
                 -HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH..H-TT---STTTHHHHHHHHHHHHH----SS---HH....HHHH---....--HHHHHHHHHHHHHHTTT-- CS
   PF08613.6  53 slgsylsrlqkfgesaplvllgaliYldrivkrcdkeassvtsanvyRLllvallvatKflvDlsysne....kfakvgg....islkeLnkLEidFlflvdFdl 149
                 +l +yl rl k ++ ++ + l a++Yl r+        + + + n+  L+l  l++a Kf +D+s+ n+    ++ +++     + lk+ n LEi+ l  ++++l
  MMETSP1325-20131115|4759_1 182 DLHDYLVRLYKVCQWTEECNLLAFVYLLRLLA-NTVAPVQLRRDNCKLLMLGTLMIAQKFWDDRSLRNQdmpvAWQRATTgekrVNLKQVNSLEIEILRAIEWEL 285
                 899****************************9.66777899**************************984444698887445669***********999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 1368.69
//
Query:       MMETSP1325-20131115|4761_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 577.94
//
Query:       MMETSP1325-20131115|4762_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-14   51.1   6.7    5.5e-06   25.9   0.4    4.2  3  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
       0.05   13.1   0.0      0.066   12.8   0.0    1.2  1  PF08662.6  Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.1   0.00046       3.2      26      39 .]       1      14 [.       1      14 [. 0.93
   2 !   18.0   0.1   2.4e-07    0.0017       4      39 .]      67     104 ..      64     104 .. 0.86
   3 !   25.9   0.4     8e-10   5.5e-06      11      39 .]     119     148 .]     109     148 .] 0.93

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00046
                EEEEETTSEEEEEE CS
  PF00400.27 26 lasgSrDgtirlWd 39
                ++s S+D++i +W+
  MMETSP1325-20131115|4762_1  1 FVSTSDDKKILIWE 14
                79***********6 PP

  == domain 2    score: 18.0 bits;  conditional E-value: 2.4e-07
                 EEEEESSSSSEEEEEEESS..STEEEEEETTSEEEEEE CS
  PF00400.27   4 katlrgHtspVtcvafspd..gpllasgSrDgtirlWd 39 
                 k++++gHt++ +++ +  +  g+++asg   g ++ Wd
  MMETSP1325-20131115|4762_1  67 KKVFKGHTNAGYACQITFSpnGKYMASGDGEGRCYFWD 104
                 678888888888888777777****************9 PP

  == domain 3    score: 25.9 bits;  conditional E-value: 8e-10
                 SSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  11 tspVtcvafspd.gpllasgSrDgtirlWd 39 
                  +p+ ++ ++p  ++l+as+++Dg i+lWd
  MMETSP1325-20131115|4762_1 119 DGPCIDMQWHPLqPSLVASCGWDGVIKLWD 148
                 578999***********************9 PP

>> PF08662.6  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   9.6e-06     0.066      81     157 ..      49     133 ..      44     147 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 9.6e-06
   PF08662.6  81 mpakislfdlk......vnvisk..lkekkrNtifwspqgrlvllaGfgnlaGeleiydvkklkkiakaeasn...atlvewspdgry 157
                 m+++i+++  +       ++++k  ++++++  i +sp+g++++    g+ +G+  ++d k++k+i +++a +   + +++w+p    
  MMETSP1325-20131115|4762_1  49 MENEIHVYAARdrfkriRKKVFKghTNAGYACQITFSPNGKYMAS---GDGEGRCYFWDWKSTKQIRRFRAHDdgpCIDMQWHPLQPS 133
                 667777777744444443344431155667889*********987...5789**************9999876555889999986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 754.60
//
Query:       MMETSP1325-20131115|4751_1  [L=394]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.4e-110  367.0   6.8   5.6e-110  366.7   4.7    1.1  1  PF00297.17 Ribosomal protein L3


Domain annotation for each model (and alignments):
>> PF00297.17  Ribosomal protein L3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  366.7   4.7  4.1e-114  5.6e-110       1     263 []      50     339 ..      50     339 .. 0.99

  Alignments for each domain:
  == domain 1    score: 366.7 bits;  conditional E-value: 4.1e-114
                 ----EEEEEE-------STTSEEE-EE-EBE---EE----B----S-----------SS---TSSSTTBSS-................-------HTTTTGGGS-S---EE--EE-TTSSSSS-SS-----EE-----CHHHHHHHHTTTT..S-B-TTSS--SS-BEEEEE----------TTT-------TTTT--.--S-S-----SSSS--SSS----------EEETTEB-SB---..............S-SSS-----TT-----S-EBE-B-------STS--B- CS
  PF00297.17   1 KaGMthivreldkpgsktekkeeveavTvietppmvvvqvktyeetprGlrslktvwaehlseevkrrlykn................edgkkaievelekikkkasvkrvlahtqkrklklkqkkahlaeirvnggtiaekvdfareelevgktvkvedvFeegelvdvigvtkGkGfeGvvkRwgvkklprkhgrgllRkvgsiGawhparvlktvkraGqkGyekrtelnkkivridk..............ekeitPmGGfvhyGevendlllvkGsvpGpkkrlvtlr 263
                 KaGMth+vre+++pgskt++ke+v avT++etppmvvv++++y+ t++Glr+l+tv+a+hls+evkrr+ykn                 d  + i++e+e++k+ ++v+rvlahtq+ k+ l+qkkah++ei++ngg+ a+kvdf r+ +e  k+v+v++vF+++e +dv g +kG+G+eGvv+Rwgv++lprk++rg lRkv++iGawhparv+++v+r Gq Gy++rte+nkki+ri+               ek itPmGGf+hyG+v++d +++kG+++G kkr vtlr
  MMETSP1325-20131115|4751_1  50 KAGMTHVVREVERPGSKTHHKEVVDAVTILETPPMVVVGLVGYVRTAQGLRTLNTVFAQHLSKEVKRRFYKNwyaskqkaftkyqkkyVDAPQDIDAEIERMKADCQVIRVLAHTQIGKIGLRQKKAHMMEIQINGGSSADKVDFGRALFE--KEVPVSSVFAKDENIDVLGASKGRGNEGVVTRWGVTRLPRKTHRG-LRKVACIGAWHPARVSFSVARSGQHGYHHRTEMNKKIYRIGLkddkasaktdadltEKGITPMGGFPHYGVVNEDWIMIKGCCVGVKKRCVTLR 339
                 9**************************************************************************************99**************************************************************..*********************************************.*****************************************999************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       520  (0.0380339); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.41s 00:00:01.14 Elapsed: 00:00:00.56
# Mc/sec: 1656.43
//
Query:       MMETSP1325-20131115|4767_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|4768_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-18   64.6   0.1    4.1e-08   32.5   0.0    2.0  2  PF00023.25 Ankyrin repeat
      1e-17   64.1   0.1    1.1e-17   64.0   0.0    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
    1.3e-13   49.6   0.0    1.9e-05   24.3   0.0    2.0  2  PF13606.1  Ankyrin repeat
    6.5e-12   45.5   0.0    7.8e-12   45.2   0.0    1.2  1  PF13637.1  Ankyrin repeats (many copies)
    8.5e-09   35.2   0.1    6.6e-06   26.0   0.0    2.0  2  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   5.7e-11   1.6e-07       4      30 ..       1      27 [.       1      29 [. 0.96
   2 !   32.5   0.0   1.5e-11   4.1e-08       2      27 ..      32      57 ..      31      58 .] 0.96

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 5.7e-11
                BHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25  4 TPLHlAalrgnlevvklLlsqGAdlna 30
                TPL +Aa+ g+levv+ L+++GA+++ 
  MMETSP1325-20131115|4768_1  1 TPLFMAAQLGHLEVVRTLVEAGASVDQ 27
                9************************96 PP

  == domain 2    score: 32.5 bits;  conditional E-value: 1.5e-11
                SCBHHHHHHHTTHHHHHHHHHHTTSS CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAd 27
                G TPL +Aa+ g+levv+ L+++GA+
  MMETSP1325-20131115|4768_1 32 GATPLFIAAQEGHLEVVRVLVEAGAN 57
                89***********************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.0   0.0   3.9e-21   1.1e-17      28      84 ..       1      57 [.       1      58 [] 0.98

  Alignments for each domain:
  == domain 1    score: 64.0 bits;  conditional E-value: 3.9e-21
   PF12796.2 28 tpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgad 84
                tpL+ Aa+ g+le+v+ L+eaga+v++ +++g tpL++A++ ghle+v++L+e+ga+
  MMETSP1325-20131115|4768_1  1 TPLFMAAQLGHLEVVRTLVEAGASVDQAHESGATPLFIAAQEGHLEVVRVLVEAGAN 57
                7******************************************************98 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0     7e-09   1.9e-05       4      29 ..       1      26 [.       1      27 [. 0.96
   2 !   23.8   0.0   9.8e-09   2.7e-05       2      27 ..      32      57 ..      31      58 .] 0.95

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 7e-09
   PF13606.1  4 TpLhlAasngrielveaLlengadin 29
                TpL++Aa+ g++e+v+ L+e+ga ++
  MMETSP1325-20131115|4768_1  1 TPLFMAAQLGHLEVVRTLVEAGASVD 26
                9**********************986 PP

  == domain 2    score: 23.8 bits;  conditional E-value: 9.8e-09
   PF13606.1  2 GnTpLhlAasngrielveaLlengad 27
                G TpL++Aa+ g++e+v+ L+e+ga+
  MMETSP1325-20131115|4768_1 32 GATPLFIAAQEGHLEVVRVLVEAGAN 57
                77**********************97 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   2.8e-15   7.8e-12       3      54 .]       1      52 [.       1      56 [. 0.98

  Alignments for each domain:
  == domain 1    score: 45.2 bits;  conditional E-value: 2.8e-15
   PF13637.1  3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                t+L++aa+ g+le+v+ L+e g+++++  esG t+L iAa+ g++e+++ L+
  MMETSP1325-20131115|4768_1  1 TPLFMAAQLGHLEVVRTLVEAGASVDQAHESGATPLFIAAQEGHLEVVRVLV 52
                79***********************************************995 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   4.9e-05      0.13      18      42 ..       1      25 [.       1      27 [. 0.90
   2 !   26.0   0.0   2.4e-09   6.6e-06       1      41 [.      18      57 ..      18      58 .] 0.94

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.9e-05
   PF13857.1 18 tpLhlAakggalevvrlLlapgadl 42
                tpL +Aa  g+levvr L+++ga+ 
  MMETSP1325-20131115|4768_1  1 TPLFMAAQLGHLEVVRTLVEAGASV 25
                8999***************999875 PP

  == domain 2    score: 26.0 bits;  conditional E-value: 2.4e-09
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgad 41
                L+e+g a+v++ +e+g tpL +Aa  g+levvr L+++ga+
  MMETSP1325-20131115|4768_1 18 LVEAG-ASVDQAHESGATPLFIAAQEGHLEVVRVLVEAGAN 57
                89***.99999999**********************88876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|4766_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-63  213.5   0.1    1.3e-63  213.3   0.1    1.0  1  PF00025.16 ADP-ribosylation factor family
    9.7e-13   47.7   0.0    1.2e-12   47.3   0.0    1.1  1  PF00071.17 Ras family
    8.6e-12   44.5   0.0    1.1e-11   44.1   0.0    1.1  1  PF09439.5  Signal recognition particle receptor beta subunit
    2.4e-11   42.8   1.1    7.6e-08   31.3   0.1    2.1  2  PF00503.15 G-protein alpha subunit
    1.7e-09   38.1   0.0    2.2e-09   37.7   0.0    1.2  1  PF08477.8  Miro-like protein
    1.9e-09   36.8   0.0    2.3e-09   36.6   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    3.4e-05   23.7   0.0    4.8e-05   23.2   0.0    1.2  1  PF01926.18 50S ribosome-binding GTPase
      0.004   16.1   0.2     0.0067   15.4   0.1    1.3  1  PF01591.13 6-phosphofructo-2-kinase
  ------ inclusion threshold ------
      0.042   13.6   0.1      0.094   12.4   0.0    1.7  1  PF13671.1  AAA domain
       0.12   11.6   0.1       0.27   10.5   0.1    1.5  1  PF00448.17 SRP54-type protein, GTPase domain


Domain annotation for each model (and alignments):
>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.3   0.1   9.3e-67   1.3e-63       5     135 ..      39     168 ..      33     169 .] 0.96

  Alignments for each domain:
  == domain 1    score: 213.3 bits;  conditional E-value: 9.3e-67
                 HHCC--.TSEEEEEEE--TT---HHHHHHHHHS-EEEE-S--S-EEEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHH CS
  PF00025.16   5 laklklkkkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseee 135
                 + ++++ kke+ril++GLD+aGKtTil+klkl+e+vtt+PTigfnve++e+kn++ftvwDvGGq+k+RplW++Y+++t+++ifvvDs+dr+R++ a++e++++l+e+el+e +llv+aNKqDlp+a+s++e
  MMETSP1325-20131115|4766_1  39 MGRMFG-KKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDEMHRMLNEDELRESVLLVFANKQDLPNAMSAAE 168
                 455666.9************************************************************************************************************************987 PP

>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.0   9.1e-16   1.2e-12       2     118 ..      50     162 ..      49     168 .. 0.86

  Alignments for each domain:
  == domain 1    score: 47.3 bits;  conditional E-value: 9.1e-16
                 EEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHH.HHHHHHHHHSTTTSSEEEE---TTGGG CS
  PF00071.17   2 lvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvk.kwveeikrvaeenvpivLvGnKvDlee 118
                 +++vG  a GKt++l++   ++  ++ ++Tig++    +  v+ k++++++wD  Gq++ + l + yy++++g++ v d ++r+  + ++ ++++ +++   ++ ++++ +nK Dl +
  MMETSP1325-20131115|4766_1  50 ILMVGLDAAGKTTILYKLKLGEVVTT-IPTIGFNVE--T--VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARdEMHRMLNEDELRESVLLVFANKQDLPN 162
                 899*******************8875.9***87654..4..55689******************************************9955555555555577899999*****976 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   7.9e-15   1.1e-11       2     129 ..      46     165 ..      45     168 .. 0.83

  Alignments for each domain:
  == domain 1    score: 44.1 bits;  conditional E-value: 7.9e-15
                 ---EEEEE--TT---HHHHHHHHHSS-------S.S-EEETT-...-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT--- CS
   PF09439.5   2 skpavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflaks 129
                 ++ ++l+vGl  +GKT+++ +L  ++v +t   +  +  + ++   k+ ++t+ D+ G++k+r  l  +  + ++ +gl+fvvDS  d  ++    + +  +l + e l+++v +l+  nKq+l  a s
  MMETSP1325-20131115|4766_1  46 KEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIgFNVETVEY---KNISFTVWDVGGQDKIRP-LWRH--YYQNTQGLIFVVDSN-DRDRIDAARDEMHRMLNEDE-LRESV-LLVFANKQDLPNAMS 165
                 6679******************************889999999...*****************7.5555..58899********97.55556666677888888888.55555.566679999977765 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   9.1e-05      0.12      54      80 ..      43      69 ..       2      75 .. 0.76
   2 !   31.3   0.1   5.5e-11   7.6e-08     208     290 ..      75     146 ..      71     160 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 9.1e-05
                XXXXEEEEEEEXXXXXXXHHHHHHHHH CS
  PF00503.15 54 kkkkevklLlLGqgeSGKsTilkqfkl 80
                  kke+++L++G +  GK+Til ++kl
  MMETSP1325-20131115|4766_1 43 FGKKEMRILMVGLDAAGKTTILYKLKL 69
                5689******************98875 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 5.5e-11
                 XXXXXXXEEEEEXX.XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEGGGTTXBXSSXTTSBHHHHHHHHHHHHHTXGGG CS
  PF00503.15 208 rlkttGiseikfevesktefrlvDvGGqrserkkWipcfedvdaiiFlvslsefdqvlyedesvnrleeSlklFksicnnkll 290
                  ++t+G++  ++e+ +++ f ++DvGGq + r  W +++++++ +iF+v   + d + +  ++  r+          +n+  l
  MMETSP1325-20131115|4766_1  75 TIPTIGFNVETVEY-KNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDEMHRM----------LNEDEL 146
                 57889999899999.***********************************88888887777777666..........444444 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.0   1.6e-12   2.2e-09       1     119 []      49     159 ..      49     159 .. 0.88

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 1.6e-12
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 +++ vG   +GK+++l +l  +e +       ++  t++ + ++v+ ++ ++ +wd+gg++++     +  +++++ ++v+d++d++ ++ ++  + ++ +  +l +++++ +++nk+D
  MMETSP1325-20131115|4766_1  49 RILMVGLDAAGKTTILYKLKLGEVV-------TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDEMHRMLNEDEL-RESVLLVFANKQD 159
                 78999***************9*999.......4444455555678888888**********999998999**********************9999999999975.67899******98 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.0   1.7e-12   2.3e-09       1     103 [.      49     142 ..      49     168 .. 0.79

  Alignments for each domain:
  == domain 1    score: 36.6 bits;  conditional E-value: 1.7e-12
   PF04670.7   1 klLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesre.leedlekfqeile 103
                 ++L++G   +GKt+    i+ ++   ++++   Ti  + ++v+  +n+++ +wD+gGq+++          + ++n + li+V+D++ r+ ++++ ++++++l+
  MMETSP1325-20131115|4766_1  49 RILMVGLDAAGKTT----ILYKLKLGEVVTTIPTIGFNVETVE-YKNISFTVWDVGGQDKIRPL-----WRHYYQNTQGLIFVVDSNDRDrIDAARDEMHRMLN 142
                 69***********9....899999******************7.889***********998877.....4899**************76544444444444443 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   3.5e-08   4.8e-05       2     103 ..      50     142 ..      49     157 .. 0.68

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 3.5e-08
                 EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSE.SEEEEETTEEEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTS..HHHHHHHHHHHHHH CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrdi.tenevkkekiilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasa..vlkeadkellnele 103
                 + +vG+  +GK+t++ +L   +++ +  + g   ++ ++++     ++++D+ G       d     i+  +++  +++++l++vvd+++  ++++a  e+ ++l+
  MMETSP1325-20131115|4766_1  50 ILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETvEYKN---ISFTVWDVGGQ------D----KIRPLWRHYyQNTQGLIFVVDSNDrdRIDAARDEMHRMLN 142
                 789***************96667566565566666634433...2389******2......2....478899***9***********8776655556666666662 PP

>> PF01591.13  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   4.9e-06    0.0067       8      51 ..      42      85 ..      36      98 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 4.9e-06
  PF01591.13  8 nlknsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgk 51
                 + ++++ i++vGL a gKt+i  kl      ++++t  Fnv  
  MMETSP1325-20131115|4766_1 42 MFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVET 85
                56677899*****************9888888888999998865 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.8e-05     0.094       2      38 ..      50      84 ..      50     150 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 6.8e-05
   PF13671.1  2 vllvGlpGsGKstlaerllkklgyvrlsqdtlrkrlf 38
                +l+vGl ++GK+t + +l  klg v+ + +t+   ++
  MMETSP1325-20131115|4766_1 50 ILMVGLDAAGKTTILYKL--KLGEVVTTIPTIGFNVE 84
                79***********99985..47777777777665554 PP

>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00019      0.27       3      21 ..      49      67 ..      47      73 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00019
                EEEEE-------TTTHHHH CS
  PF00448.17  3 villvGlqGaGKTTtlaKL 21
                 il+vGl  aGKTT l KL
  MMETSP1325-20131115|4766_1 49 RILMVGLDAAGKTTILYKL 67
                59*************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 861.67
//
Query:       MMETSP1325-20131115|4769_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0019   18.5   2.0        5.4    7.8   0.0    3.7  4  PF13428.1  Tetratricopeptide repeat
     0.0046   16.4   0.0       0.22   11.0   0.0    3.2  3  PF13414.1  TPR repeat
     0.0079   15.9   1.2       0.22   11.4   0.0    3.5  4  PF07719.12 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.022   14.5   0.0       0.07   12.9   0.0    1.9  1  PF13424.1  Tetratricopeptide repeat
      0.086   12.3   0.1       0.47   10.0   0.0    2.3  2  PF00515.23 Tetratricopeptide repeat
      0.089   12.5   0.1       0.34   10.6   0.0    2.1  2  PF06628.7  Catalase-related immune-responsive
        0.1   12.5   0.2       0.51   10.2   0.0    2.2  3  PF00040.14 Fibronectin type II domain


Domain annotation for each model (and alignments):
>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.042        81      30      43 ..       7      20 ..       2      21 .. 0.63
   2 !    6.8   0.1    0.0056        11       1      39 [.      12      50 ..      12      52 .. 0.90
   3 !    7.8   0.0    0.0027       5.4       7      40 ..      82     115 ..      76     119 .. 0.80
   4 ?   -3.4   0.0         7   1.4e+04      25      29 ..     166     170 ..     163     177 .. 0.53

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.042
   PF13428.1 30 laPddaealllLar 43
                ++P++ae++l+  r
  MMETSP1325-20131115|4769_1  7 KNPKNAELWLEAIR 20
                57777777777665 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0056
   PF13428.1  1 peallalarallalGdpdeAiallrralalaPddaeall 39
                +e++l+  r+  ++ + + +i+l  +al+ +Pd+  ++ 
  MMETSP1325-20131115|4769_1 12 AELWLEAIRLEKEASNEKMGINLMAKALQECPDSGVLWA 50
                5789999999999999999**************988885 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0027
   PF13428.1   7 larallalGdpdeAiallrralalaPddaealll 40 
                  a ++ +   + +A+++++ra+ l+ +  +++ +
  MMETSP1325-20131115|4769_1  82 VAGLFVDERKYPKARKWYNRAVTLDDKIGDVWAA 115
                 57788899999***********998776666654 PP

  == domain 4    score: -3.4 bits;  conditional E-value: 7
   PF13428.1  25 rrala 29 
                 +ra++
  MMETSP1325-20131115|4769_1 166 DRAAR 170
                 33332 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.17   3.3e+02      24      40 ..      33      49 ..      10      51 .. 0.66
   2 !   11.0   0.0   0.00011      0.22      11      42 ..      84     115 ..      74     127 .. 0.85
   3 ?   -2.3   0.0       1.6   3.1e+03      29      44 ..     136     151 ..     133     152 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.17
   PF13414.1 24 eayekAleldpnnaely 40
                 +  kAl+ +p++ +l+
  MMETSP1325-20131115|4769_1 33 NLMAKALQECPDSGVLW 49
                44457777777777776 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00011
   PF13414.1  11 nalfkegdydeAieayekAleldpnnaelyyn 42 
                   +  e++y +A + y++A+ ld +  +++++
  MMETSP1325-20131115|4769_1  84 GLFVDERKYPKARKWYNRAVTLDDKIGDVWAA 115
                 5678899****************998886654 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 1.6
   PF13414.1  29 AleldpnnaelyynlA 44 
                 +   dp++ el++ ++
  MMETSP1325-20131115|4769_1 136 CSGADPKYGELWCSIS 151
                 5567999****99875 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.77   1.5e+03      22      30 ..      13      21 ..       3      25 .. 0.61
   2 ?    0.5   0.0      0.35   6.8e+02      22      33 ..      33      44 ..      30      45 .. 0.83
   3 ?   -3.1   0.0       4.9   9.6e+03       8      25 ..      63      70 ..      61      72 .. 0.43
   4 !   11.4   0.0   0.00011      0.22      14      32 ..      89     107 ..      81     109 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.77
                HHHHHHHHH CS
  PF07719.12 22 eafekAlel 30
                e++ +A++l
  MMETSP1325-20131115|4769_1 13 ELWLEAIRL 21
                455666666 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.35
                HHHHHHHHH-TT CS
  PF07719.12 22 eafekAleldPn 33
                +++ kAl+ +P+
  MMETSP1325-20131115|4769_1 33 NLMAKALQECPD 44
                67889****998 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 4.9
                HHHHHHTT-HHHHHHHHH CS
  PF07719.12  8 GlayyklgdyeeAleafe 25
                ++++++l          +
  MMETSP1325-20131115|4769_1 63 AKSLEAL----------K 70
                4444443..........3 PP

  == domain 4    score: 11.4 bits;  conditional E-value: 0.00011
                 TT-HHHHHHHHHHHHHH-T CS
  PF07719.12  14 lgdyeeAleafekAleldP 32 
                  ++y +A++++++A+ ld 
  MMETSP1325-20131115|4769_1  89 ERKYPKARKWYNRAVTLDD 107
                 579************9996 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.6e-05      0.07      10      40 ..      81     111 ..      74     122 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.6e-05
   PF13424.1  10 nlalvlrrlgdydeAlelyekalellrelgd 40 
                   a+++  +++y +A+++y++a++l  + gd
  MMETSP1325-20131115|4769_1  81 AVAGLFVDERKYPKARKWYNRAVTLDDKIGD 111
                 578999999***************9888886 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       2.4   4.6e+03      26      33 ..      37      44 ..      37      45 .. 0.84
   2 ?   10.0   0.0   0.00024      0.47      15      31 ..      90     106 ..      85     108 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 2.4
                HHHHHHTT CS
  PF00515.23 26 kALelnPn 33
                kAL+  P+
  MMETSP1325-20131115|4769_1 37 KALQECPD 44
                89999997 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00024
                 T-HHHHHHHHHHHHHHH CS
  PF00515.23  15 gkydeAleyyekALeln 31 
                  ky +A + y++A++l+
  MMETSP1325-20131115|4769_1  90 RKYPKARKWYNRAVTLD 106
                 69*************98 PP

>> PF06628.7  Catalase-related immune-responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00018      0.34      31      61 ..     116     145 ..      88     146 .. 0.86
   2 ?   -2.2   0.0       1.8   3.5e+03      24      41 ..     160     177 ..     158     181 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00018
                 HHHHCGCCS-HHCHHHHHHHHHHHH-ST-HH CS
   PF06628.7  31 niafelskvseeeirervvshfskvDpdlGq 61 
                  +afels+ ++e  ++ vv  +s +Dp++G+
  MMETSP1325-20131115|4769_1 116 YYAFELSHGEDE-HQKDVVTRCSGADPKYGE 145
                 589*******99.7***************96 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHCGCCS-H CS
   PF06628.7  24 eqerlveniafelskvse 41 
                 e+++l ++ a+ l  ++e
  MMETSP1325-20131115|4769_1 160 EKKELLDRAARKLIEIQE 177
                 889999999999877765 PP

>> PF00040.14  Fibronectin type II domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.9   3.7e+03      23      39 ..      76      92 ..      70      93 .. 0.71
   2 ?   -1.8   0.0       1.5     3e+03       9      26 ..      96     113 ..      95     117 .. 0.77
   3 ?   10.2   0.0   0.00026      0.51       9      34 ..     130     155 ..     127     159 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 1.9
  PF00040.14 23 gklWCattknydkdgkw 39
                 +  Ca+   + +++k+
  MMETSP1325-20131115|4769_1 76 PHVICAVAGLFVDERKY 92
                55669998888877777 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.5
  PF00040.14   9 gktyssCtsegredgklW 26 
                 +k+y++ ++ +++ g  W
  MMETSP1325-20131115|4769_1  96 RKWYNRAVTLDDKIGDVW 113
                 589999888888877777 PP

  == domain 3    score: 10.2 bits;  conditional E-value: 0.00026
  PF00040.14   9 gktyssCtsegredgklWCattknyd 34 
                 +   ++C  ++ + g lWC+++k+  
  MMETSP1325-20131115|4769_1 130 KDVVTRCSGADPKYGELWCSISKDPA 155
                 667789999*************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.56
# Mc/sec: 795.93
//
Query:       MMETSP1325-20131115|4771_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 417.14
//
Query:       MMETSP1325-20131115|4776_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 235.03
//
Query:       MMETSP1325-20131115|4778_1  [L=309]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-18   64.8   0.9    1.4e-10   40.5   0.2    4.6  5  PF00571.23 CBS domain


Domain annotation for each model (and alignments):
>> PF00571.23  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00019       2.7       7      55 ..      48      99 ..      34     101 .. 0.90
   2 !    8.2   0.0   0.00013       1.8      15      56 ..     140     182 ..     138     183 .. 0.89
   3 !   40.5   0.2     1e-14   1.4e-10       8      52 ..     207     251 ..     199     255 .. 0.94
   4 ?   -3.2   0.0      0.47   6.4e+03      15      23 ..     267     275 ..     266     276 .. 0.86
   5 !    2.9   0.0    0.0056        77       6      27 ..     285     306 ..     281     308 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00019
                S..SCCEEETTSBHHHHHHHHHHHTTSEEEEEEET.TEB---EEHHHHHHHH CS
  PF00571.23  7 k..dvvtvppdetlsealeilrktgvsrlpVvDed.grlvGiitlrDllkal 55
                   +vv+ + + +++ a+  l +++  ++p  D     +vG+ + +D +  l
  MMETSP1325-20131115|4778_1 48 DsgKVVVFDTNIPIQLAFYALLEHDMPAAPLWDSAsRGFVGLMSVTDFIDIL 99
                45689***************************999************99876 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00013
                 TSBHHHHHHHHHHHTTSEEEEEEET.TEB---EEHHHHHHHHH CS
  PF00571.23  15 detlsealeilrktgvsrlpVvDed.grlvGiitlrDllkall 56 
                 d+ + ea  +l++++ + lp++  d   ++ i++  D+l++l+
  MMETSP1325-20131115|4778_1 140 DTLVYEACTTLQQHHQRFLPIIPPDgSGVLSILSYYDVLNFLV 182
                 77799*****************86669999********99986 PP

  == domain 3    score: 40.5 bits;  conditional E-value: 1e-14
                 SCCEEETTSBHHHHHHHHHHHTTSEEEEEEETTEB---EEHHHHH CS
  PF00571.23   8 dvvtvppdetlsealeilrktgvsrlpVvDedgrlvGiitlrDll 52 
                 +vvtv++ ++l+++l++++++++s++pVvD+d+r + + +++D+ 
  MMETSP1325-20131115|4778_1 207 QVVTVDRKARLGDVLDLMEERDISAVPVVDDDKRAINLYSRSDIT 251
                 89*****************************************96 PP

  == domain 4    score: -3.2 bits;  conditional E-value: 0.47
                 TSBHHHHHH CS
  PF00571.23  15 detlseale 23 
                 d+t++++le
  MMETSP1325-20131115|4778_1 267 DMTVGQVLE 275
                 899*99998 PP

  == domain 5    score: 2.9 bits;  conditional E-value: 0.0056
                 CSSCCEEETTSBHHHHHHHHHH CS
  PF00571.23   6 tkdvvtvppdetlsealeilrk 27 
                    ++t++++++l+ ++e++++
  MMETSP1325-20131115|4778_1 285 KDHMHTCSAETSLQGIFELFAE 306
                 55789*************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.35s 00:00:00.94 Elapsed: 00:00:00.55
# Mc/sec: 1346.32
//
Query:       MMETSP1325-20131115|4770_1  [L=950]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-08   34.6   0.1      1e-08   34.6   0.1    2.2  2  PF13926.1 Domain of unknown function (DUF4211)


Domain annotation for each model (and alignments):
>> PF13926.1  Domain of unknown function (DUF4211)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.4      0.38   5.3e+03      13      35 ..     388     410 ..     382     419 .. 0.75
   2 !   34.6   0.1   7.5e-13     1e-08      18     136 ..     799     924 ..     780     941 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 0.38
   PF13926.1  13 lgepdedededelpleksfestk 35 
                  ++p+++ + +++p+e++ es +
  MMETSP1325-20131115|4770_1 388 RSKPKQARNRAKEPVESESESES 410
                 46788888888888888887765 PP

  == domain 2    score: 34.6 bits;  conditional E-value: 7.5e-13
   PF13926.1  18 edededelpleksfestktlkehFkiyvealvsnaldpd...flqelee.ekdeyflsalkkvddevegrkdsllkssaWksrfkealetyPelkvaelsek...egkkCqaCnrkkhpatvrirl 136
                 + +d++e +++   ++  + ++ F  yve+l   + d++   f+ +  +  +  ++ +a   +++ + + ++s l   aWk   +++l+ +P  + ++ls+    + +kC+aC+r++hpa+++++ 
  MMETSP1325-20131115|4770_1 799 ALSDDEEGQAQAGSHRRVSVRKAFGLYVELLCNAVHDQKgeaFMLRMAKdRNHAHLSDAASLIEKLLCSPRESILGTMAWKAGWLTDLKSRPCGRCVRLSQRelrSSGKCEACGRTNHPARFKMVK 924
                 45566666777777888999999999999998877775443465555552666**********************************************999999*****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (950 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1257  (0.0919397); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.98u 0.37s 00:00:02.35 Elapsed: 00:00:01.03
# Mc/sec: 2210.23
//
Query:       MMETSP1325-20131115|4781_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.073   12.7   2.1       0.11   12.2   1.4    1.3  1  PF05886.6  Orthopoxvirus F8 protein
       0.31   10.9   4.4       0.46   10.3   3.0    1.3  1  PF01543.12 Hepatitis C virus capsid protein


Domain annotation for each model (and alignments):
>> PF05886.6  Orthopoxvirus F8 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.4   1.6e-05      0.11       2      28 ..      33      59 ..      32      70 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.6e-05
   PF05886.6  2 eGskrkhesrrpqqeqeqhrprtppsy 28
                + sk+k+++rr   +++q+r ++pp  
  MMETSP1325-20131115|4781_1 33 QNSKKKKDARREAANRKQPRAKSPPLS 59
                579*********************965 PP

>> PF01543.12  Hepatitis C virus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.0   6.7e-05      0.46      47     108 ..      41     103 ..      35     117 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 6.7e-05
  PF01543.12  47 avrktsersqprgrrqpipkarrr..earswlspGtlgpstalralvGrdGscglagallsprg 108
                 a r + +r qpr +  p+ k r++  ++rs+   G      + ra+ G +     +ga  + +g
  MMETSP1325-20131115|4781_1  41 ARREAANRKQPRAKSPPLSKDRQKaaDGRSGGASGANAAKSSGRAAGGVEMHT-RSGAAETQKG 103
                 567899*************9987622678999999999999999999998855.5555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|4782_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       502  (0.0367174); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|4783_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00094   17.0  11.0    0.00094   17.0   7.6    1.0  1  PF04147.7  Nop14-like family
     0.0092   15.4   4.4       0.01   15.2   3.1    1.1  1  PF03286.9  Pox virus Ag35 surface protein
  ------ inclusion threshold ------
      0.036   13.2   8.8      0.032   13.4   6.1    1.1  1  PF05285.7  SDA1
      0.047   11.9   9.1      0.044   12.0   6.3    1.1  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
       0.25    9.6  18.0       0.28    9.5  12.5    1.1  1  PF03344.10 Daxx Family
        1.7    8.0  15.8        2.2    7.6  11.0    1.1  1  PF09184.6  PPP4R2
        3.7    7.0  16.7        5.8    6.3  11.6    1.3  1  PF04546.8  Sigma-70, non-essential region
        4.4    6.5  13.2        5.9    6.0   9.1    1.2  1  PF07423.6  Protein of unknown function (DUF1510)
        5.6    6.8  11.5        7.5    6.4   8.0    1.2  1  PF08432.5  Fungal protein of unknown function (DUF1742)
          7    5.9  11.5        8.5    5.6   8.0    1.1  1  PF14153.1  Spore coat protein CotO


Domain annotation for each model (and alignments):
>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   7.6   6.9e-07   0.00094     341     394 ..     100     160 ..      18     166 .] 0.49

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 6.9e-07
   PF04147.7 341 e..............eegvededeeeddddeeeeeedvdedeeeedeedeesddeeeeeeeeeaseee 394
                 +              ++g+++ +eee+d+d       +dede+ee e+ +++ddeeeee+eeea++++
  MMETSP1325-20131115|4783_1 100 KariglaaplxelfsNSGKTQAEEEEEDED-------EDEDEDEEGEQAGQDDDEEEEEAEEEAAAAA 160
                 044444444433333334444444444444.......3444555556666666666666555522222 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   3.1   7.5e-06      0.01      71     117 ..     115     161 ..      77     166 .] 0.84

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 7.5e-06
   PF03286.9  71 kkekekeeeeekkeeededkdteenendddekeeskdskesasaneq 117
                  + k ++eeee++e+eded+d+e +++++d++ee+++++e+a+a + 
  MMETSP1325-20131115|4783_1 115 NSGKTQAEEEEEDEDEDEDEDEEGEQAGQDDDEEEEEAEEEAAAAAA 161
                 56788999999999999999999999999999999999999887765 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   6.1   2.3e-05     0.032     102     168 ..     124     157 ..      40     166 .] 0.60

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.3e-05
   PF05285.7 102 dvdsdeededeDeegewvdvesdeeeessDsedeeeeseeeeeeeesekkkkeesdeekseeeeeea 168
                 ++++++ededeDeege+   ++                                 dee++e+eee+a
  MMETSP1325-20131115|4783_1 124 EEEDEDEDEDEDEEGEQAGQDD---------------------------------DEEEEEAEEEAA 157
                 0111111112222222222222.................................222222222222 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   6.3   3.3e-05     0.044     290     328 ..     117     155 ..      52     165 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.3e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF05793.7 290 dsasendpeeredklseEeeekkeieqdedeeekeeekk 328
                  +++ +++ee+ed+ ++E+ee ++ +qd+deee+e e++
  MMETSP1325-20131115|4783_1 117 GKTQAEEEEEDEDEDEDEDEEGEQAGQDDDEEEEEAEEE 155
                 344555666666666677777666666666666555543 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  12.5    0.0002      0.28     437     480 ..     114     157 ..      88     166 .] 0.55

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0002
  PF03344.10 437 qeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadn 480
                  +s +++  e+eede++de+e+e+ ++++++++eeeee+ee++ 
  MMETSP1325-20131115|4783_1 114 SNSGKTQAEEEEEDEDEDEDEDEEGEQAGQDDDEEEEEAEEEAA 157
                 34444444444445555555555555555555555544444332 PP

>> PF09184.6  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  11.0    0.0016       2.2     246     284 ..     118     156 ..      99     161 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0016
   PF09184.6 246 knkkaddeedddedsdyieekelkedeeedeteeeeeee 284
                 k + +++eed+ded+d+ ee e+  +++++e+ee eee+
  MMETSP1325-20131115|4783_1 118 KTQAEEEEEDEDEDEDEDEEGEQAGQDDDEEEEEAEEEA 156
                 344455555555555544555555555555555555544 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  11.6    0.0042       5.8      35      71 ..     121     157 ..     103     166 .] 0.34

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0042
   PF04546.8  35 aaeeeeaeeeseddeeeeed.....dddddededeeeeseea 71 
                 a+eeee e+e+ed++e   +     +ddd+e+e+ e  +e+a
  MMETSP1325-20131115|4783_1 121 AEEEEEDEDEDEDEDE---EgeqagQDDDEEEEEAE--EEAA 157
                 1111111111111122...12334322222222222..1111 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   9.1    0.0043       5.9      60      99 ..     120     156 ..     103     166 .] 0.36

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0043
   PF07423.6  60 teeeevkeeekeaakdedkeddsesekkdeeseeeeeeek 99 
                 + eee+++e++++ +de+ e+   + ++d+e+eee+eee 
  MMETSP1325-20131115|4783_1 120 QAEEEEEDEDEDEDEDEEGEQ---AGQDDDEEEEEAEEEA 156
                 111111111111111111111...2222222222222221 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   8.0    0.0055       7.5      84     126 ..     119     161 ..     107     166 .] 0.42

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0055
   PF08432.5  84 akkekkkkkkekdkekekkkdkkddksekekekeeeekaeelk 126
                  ++e++++ +++d++++++ +++++++++e+e++eee+a+++ 
  MMETSP1325-20131115|4783_1 119 TQAEEEEEDEDEDEDEDEEGEQAGQDDDEEEEEAEEEAAAAAA 161
                 2222233334444444444444443333333333333333332 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   8.0    0.0062       8.5      62     100 ..     118     156 ..      92     166 .] 0.45

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0062
   PF14153.1  62 aeveseeeaeeaesedeqesseqeeiaqeveeeeeeeee 100
                 +++++eee++e e ede e+ eq+   +++eeee+eee 
  MMETSP1325-20131115|4783_1 118 KTQAEEEEEDEDEDEDEDEEGEQAGQDDDEEEEEAEEEA 156
                 222222222222222222222222222222222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       988  (0.0722645); expected 273.4 (0.02)
Passed bias filter:                      590  (0.0431539); expected 273.4 (0.02)
Passed Vit filter:                       166  (0.0121416); expected 13.7 (0.001)
Passed Fwd filter:                        32  (0.00234055); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.66u 0.41s 00:00:01.07 Elapsed: 00:00:00.56
# Mc/sec: 710.35
//
Query:       MMETSP1325-20131115|4784_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-08   32.1   0.0    2.4e-07   30.1   0.0    1.8  2  PF00023.25 Ankyrin repeat
    7.4e-07   29.2   0.0      8e-07   29.1   0.0    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
    8.4e-06   25.7   0.2    0.00059   19.8   0.1    2.0  2  PF13857.1  Ankyrin repeats (many copies)
    0.00025   20.8   0.0    0.00091   19.1   0.0    1.7  2  PF13606.1  Ankyrin repeat
    0.00055   20.2   0.1    0.00068   19.9   0.1    1.3  1  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   8.6e-11   2.4e-07       3      32 ..      10      39 ..       9      40 .. 0.92
   2 ?   -0.0   0.0       0.3   8.1e+02       6      10 ..      49      53 ..      46      54 .] 0.82

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 8.6e-11
                CBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  3 fTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                +T+L++Aa+ ++l+v+ lL+s GA+ +  d
  MMETSP1325-20131115|4784_1 10 RTALMWAAEENHLDVAALLVSEGASKDSGD 39
                7***********************988755 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 0.3
                HHHHH CS
  PF00023.25  6 LHlAa 10
                L++Aa
  MMETSP1325-20131115|4784_1 49 LMWAA 53
                9***9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   2.9e-10     8e-07      25      67 ..       7      53 ..       1      54 [] 0.75

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 2.9e-10
   PF12796.2 25 l.getpLhlAaeagnleivklLleagadvnakd...kegntpLhlAv 67
                  ++t+L++Aae ++l+++ lL++ ga+ ++ d      ++ L++A+
  MMETSP1325-20131115|4784_1  7 AgRRTALMWAAEENHLDVAALLVSEGASKDSGDsnrVGWRNSLMWAA 53
                24678999999999999999999999998888777666677788887 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   2.2e-07   0.00059      11      36 ..       4      29 ..       1      42 [. 0.82
   2 !    5.5   0.0    0.0071        20      10      24 ..      39      53 ..      31      54 .] 0.78

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 2.2e-07
   PF13857.1 11 atdeggntpLhlAakggalevvrlLl 36
                +td g++t+L++Aa+ ++l+v+ lL+
  MMETSP1325-20131115|4784_1  4 TTDAGRRTALMWAAEENHLDVAALLV 29
                5788899***************9999 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0071
   PF13857.1 10 natdeggntpLhlAa 24
                ++++ g+++ L++Aa
  MMETSP1325-20131115|4784_1 39 DSNRVGWRNSLMWAA 53
                55667788******9 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   3.3e-07   0.00091       3      27 ..      10      34 ..       8      37 .. 0.91
   2 ?   -0.7   0.0       0.8   2.2e+03       4      10 ..      47      53 ..      44      54 .] 0.80

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 3.3e-07
   PF13606.1  3 nTpLhlAasngrielveaLlengad 27
                +T+L++Aa+ ++++++ +L++ ga 
  MMETSP1325-20131115|4784_1 10 RTALMWAAEENHLDVAALLVSEGAS 34
                8********************9986 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.8
   PF13606.1  4 TpLhlAa 10
                + L++Aa
  MMETSP1325-20131115|4784_1 47 NSLMWAA 53
                6799998 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   2.5e-07   0.00068       1      27 [.       9      40 ..       9      54 .] 0.77

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 2.5e-07
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgid.....i 27
                ++taL++aa  ++l++++lL++ g++      
  MMETSP1325-20131115|4784_1  9 RRTALMWAAEENHLDVAALLVSEGASkdsgdS 40
                68*******************98876444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.33u 0.31s 00:00:00.64 Elapsed: 00:00:00.44
# Mc/sec: 294.10
//
Query:       MMETSP1325-20131115|4772_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-56  191.5  23.5    1.4e-56  191.5  16.3    1.6  2  PF04515.7 Plasma-membrane choline transporter


Domain annotation for each model (and alignments):
>> PF04515.7  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.4     0.085   1.2e+03     265     322 ..      67     129 ..      54     136 .. 0.56
   2 !  191.5  16.3     1e-60   1.4e-56       1     333 [.     152     467 ..     152     468 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.085
   PF04515.7 265 lvsaltgllaylllkktkp.....kedlnyyavpvilvfiiayliasvffsvyesavdtlfvc 322
                   ++++g la+++  ++ +     +++++  + +  l+  +a++++++ + v+ s+   l+ c
  MMETSP1325-20131115|4772_1  67 GSVGAMGALAFVYGLDEIEsgsgsEKGKSGIMKIFGLCLAVAIVVSQLWVRVMISCGGLLLKC 129
                 444445555555544444456665555555555556666666667666666666665555555 PP

  == domain 2    score: 191.5 bits;  conditional E-value: 1e-60
   PF04515.7   1 ivaiiltilalvlllliiflrkRirlaiallkeaskavskvpslvlvpiltfvlllafivlwivvavalytsgepkeknsskstsegessgvevkldkklilllvyllfgllWtsevikavsqvtiagvvaswYfagkkrdvpkfpvlasfkraltyslGSiafGSLivaiiqliRilleylneklkeaenklvkfllcclkcclwclekfvkflNrnAYvmiaiyGksFctsAkdafellkrnglralvldkltdfvlflgkllvsaltgllaylllkktkp...kedlnyyavpvilvfiiayliasvffsvyesavdtlfvcfaedpelernd 333
                 ++ai + +++l+++ ++++++++i la + l++a+k+v+ +ps+ l++++++v+++++++l+++++ ++   +++++ +s+                    ++++++++ ++W ++v k+++ +t+ag+ a w+fa+++   p +p++++f ra+t +lGSi++GS++va+ q++  ++  +++k  e++n++  + +cc+ c+ +cl k+ +++  +A++++++yG +F ++  ++ +l+++ g+  l +d+l+++vl +g+++v+++tg +  l+++k      +   + +++  ++ +i+++ +++  +sv+esa  ++++  +e+p+  +++
  MMETSP1325-20131115|4772_1 152 YFAIPFGVMTLLIITYFCCITNKIDLASQCLRTACKIVRAYPSTQLIALVMTVVSMVWSCLFAMALYGIHDFFDAEDMSSG-----------------RRAITWIMIILIYFWGINVCKNIVVCTTAGTAAEWWFARSS---PVHPTWSAFDRAVTVNLGSICYGSFFVAVTQTVAKVVTKIKKKVDENGNRWLGAAMCCCVCLANCLAKIAEVFSSYAFIIVGMYGYGFGKAGGHTAKLFRESGILLLEMDGLVELVLAMGSVVVALITGAAGALIAEKGPDswtDGVSDATLICGTIGAIMGFGVCQTCMSVVESANNSVLISWMENPHALEQN 467
                 58999**************************************************88888888888888888777665543.................567888999999***************************98...***********************************************************************************************************************************9999997776996666677778888899****************************9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       920  (0.0672908); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.37s 00:00:01.25 Elapsed: 00:00:00.55
# Mc/sec: 2213.36
//
Query:       MMETSP1325-20131115|4786_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00092   18.1   0.0    0.00092   18.1   0.0    1.0  1  PF02005.11 N2,N2-dimethylguanosine tRNA methyltransferase


Domain annotation for each model (and alignments):
>> PF02005.11  N2,N2-dimethylguanosine tRNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   6.8e-08   0.00092       9      42 ..      10      40 ..       2      46 .. 0.76

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 6.8e-08
                --.SSTTT.SSS---GGGHHHHHHHHHH...HHH CS
  PF02005.11  9 dkevtvskkeeVFYNPvmefnRDlsvlvirqlel 42
                d+   + ++++VF+NP++++ R  sv+v+ q++ 
  MMETSP1325-20131115|4786_1 10 DE---LMQANDVFFNPIQKLQRSWSVAVLTQFAH 40
                43...77889******************765543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 216.59
//
Query:       MMETSP1325-20131115|4785_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-69  232.1   0.0    3.8e-69  232.0   0.0    1.0  1  PF01269.12 Fibrillarin
     0.0023   16.9   0.1     0.0034   16.3   0.0    1.3  1  PF08704.5  tRNA methyltransferase complex GCD14 subunit


Domain annotation for each model (and alignments):
>> PF01269.12  Fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.0   0.0   5.5e-73   3.8e-69      31     164 ..       2     142 ..       1     143 [] 0.97

  Alignments for each domain:
  == domain 1    score: 232.0 bits;  conditional E-value: 5.5e-73
                 ----EEEE----...........EEEEE-TTT-S---TTT------S------EEEE------HHHHHHHHH-----EE--BS-HHHHHHHHHHHCT-TTB---BS-TTSGGGCTTC---BSEEEEE--STTHHHHHHHHH CS
  PF01269.12  31 vygEklikveee.......eekvEyRvWnpfrsKlaaailkglkeipikkgskvLYLGaasGttvsHvsDivgeegvvyavefsprvgrelievakkRknivPileDArkPekYrmlvekvDvifaDvaqpdqarilalna 164
                 vygEk+i+v++          k+EyRvWnpfrsK+aaail+g+++i++ +gskvLYLGaa+GttvsHvsDivg++g+vyavefs+r gr+li++ak+R+n++Pi+eDAr+P kYrmlv++vD++faDvaqpdq ri+aln+
  MMETSP1325-20131115|4785_1   2 VYGEKRIQVDGPanadgtaGPKIEYRVWNPFRSKIAAAILQGIDNIYMGPGSKVLYLGAAAGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQGRIVALNS 142
                 9********9988888877789*********************************************************************************************************************97 PP

>> PF08704.5  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     5e-07    0.0034      97     188 ..      46     134 ..      32     142 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 5e-07
   PF08704.5  97 kLevkpGsvvvesGtGsgslshaiartvaPtGhlytfefheqRaekareeFrehelsslvtvthrdvc.keGFdeevenkaDavFLDlPaPwe 188
                 ++ + pGs+v+  G  +g   + ++  v+PtG +y++ef ++  +   +  ++ +  ++v     d+     + + + + +D vF D+ +P++
  MMETSP1325-20131115|4785_1  46 NIYMGPGSKVLYLGAAAGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKS-R--TNVIPIIEDARhPLKY-RMLVGMVDCVFADVAQPDQ 134
                 566789************99999****************87554444433333.2..3333333344313334.4566999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 761.51
//
Query:       MMETSP1325-20131115|4787_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 545.05
//
Query:       MMETSP1325-20131115|4788_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.8   0.3      0.052   13.5   0.1    1.7  2  PF13516.1  Leucine Rich repeat
      0.024   14.4   0.0       0.03   14.2   0.0    1.3  1  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.38   2.6e+03      14      23 ..       3      12 ..       2      13 .. 0.78
   2 ?   13.5   0.1   7.6e-06     0.052       1      17 [.      15      32 ..      15      39 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.38
   PF13516.1 14 igdeGlsaLa 23
                ++d  + aLa
  MMETSP1325-20131115|4788_1  3 FTDAAVIALA 12
                6888888997 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 7.6e-06
   PF13516.1  1 lknLtsLdLsnNq.igde 17
                + nLt++dLs++  ++d 
  MMETSP1325-20131115|4788_1 15 CANLTTIDLSGCTsLTDA 32
                78*********9768885 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.4e-06      0.03       1      14 [.      17      31 ..      17      45 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4.4e-06
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL+++dLsg+ +lt+
  MMETSP1325-20131115|4788_1 17 NLTTIDLSGCtSLTD 31
                8************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 220.46
//
Query:       MMETSP1325-20131115|4789_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 489.05
//
Query:       MMETSP1325-20131115|4792_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.027   14.3   0.2      0.031   14.1   0.1    1.2  1  PF09078.6 CheY binding


Domain annotation for each model (and alignments):
>> PF09078.6  CheY binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   2.2e-06     0.031      33      56 ..      21      44 ..      15      53 .] 0.85

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.2e-06
   PF09078.6 33 adslevtLetsvseDDIvAVlCFv 56
                +++++++L+ +v  DDI+ ++ F 
  MMETSP1325-20131115|4792_1 21 QEAYQAWLDLEVRTDDITMICVFL 44
                6789******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|4793_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 540.36
//
Query:       MMETSP1325-20131115|4790_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 213.96
//
Query:       MMETSP1325-20131115|4794_1  [L=317]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 1550.30
//
Query:       MMETSP1325-20131115|4795_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-16   59.1   0.0      8e-16   58.2   0.0    1.5  1  PF08241.7  Methyltransferase domain
    4.6e-10   39.3   0.0    1.9e-09   37.3   0.0    1.9  2  PF13489.1  Methyltransferase domain
    8.7e-09   34.7   0.0    1.6e-08   33.8   0.0    1.4  1  PF01209.13 ubiE/COQ5 methyltransferase family
    1.3e-07   31.2   0.0      2e-07   30.6   0.0    1.3  1  PF13847.1  Methyltransferase domain
    4.5e-07   30.1   0.0    9.6e-07   29.0   0.0    1.6  1  PF08242.7  Methyltransferase domain
    3.8e-05   22.1   0.0      5e-05   21.7   0.0    1.1  1  PF03141.11 Putative S-adenosyl-L-methionine-dependent methyltransferase
    0.00014   22.0   0.0    0.00029   21.0   0.0    1.6  1  PF13649.1  Methyltransferase domain
  ------ inclusion threshold ------
      0.014   14.9   0.0      0.023   14.1   0.0    1.3  1  PF05148.10 Hypothetical methyltransferase
      0.017   13.7   0.0      0.024   13.2   0.0    1.1  1  PF03492.10 SAM dependent carboxyl methyltransferase
      0.067   11.9   0.0      0.094   11.4   0.0    1.2  1  PF03291.11 mRNA capping enzyme


Domain annotation for each model (and alignments):
>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.0   5.8e-19     8e-16      49      94 ..      27      72 ..       5      73 .. 0.92

  Alignments for each domain:
  == domain 1    score: 58.2 bits;  conditional E-value: 5.8e-19
   PF08241.7 49 adaeelpfednsfDvvvssevlehledpekalkeiaRvLkpgGllv 94
                 d e+lpf+dn+fD+v+ss +l++++d+ +al+ei+RvLkp+G+++
  MMETSP1325-20131115|4795_1 27 FDEEHLPFPDNTFDMVTSSLALHWVNDLPRALREIKRVLKPDGVFI 72
                5789***************************************997 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   1.4e-12   1.9e-09      66     158 ..      25     122 ..      12     126 .. 0.73
   2 ?   -2.1   0.0       1.8   2.5e+03     150     161 ..     177     188 ..     162     189 .. 0.82

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 1.4e-12
   PF13489.1  66 sqfdeedaaepagkfdlivarevlehvpdpeellrqiaellkpgGylllstpnaslasdeafakwdylvprg.....thi.sffsaeslkelleeaGfe 158
                  +fdee   +p+++fd ++++  l++v d++++lr+i++ lkp+G+++      s   +e+ +++  ++++       h+    + +++  l+  aGf+
  MMETSP1325-20131115|4795_1  25 LMFDEEHLPFPDNTFDMVTSSLALHWVNDLPRALREIKRVLKPDGVFIGAMLGGS-TLTELRQSMLIAEQEReggvsPHVsPAANVADVGSLMTSAGFS 122
                 5799999****************************************99998765.2333333332222211222332332444778888888888886 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.8
   PF13489.1 150 elleeaGfeive 161
                  +le++Gf+i++
  MMETSP1325-20131115|4795_1 177 AWLEDNGFDIHD 188
                 578999998875 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   1.2e-11   1.6e-08     106     150 ..      28      72 ..      15      89 .. 0.89

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 1.2e-11
  PF01209.13 106 naeeLpfeddsfDvvtvsfGlrnvtDklkaLkeayrvlkpGGrlv 150
                 + e+Lpf d++fD+vt s  l  v D ++aL+e+ rvlkp G ++
  MMETSP1325-20131115|4795_1  28 DEEHLPFPDNTFDMVTSSLALHWVNDLPRALREIKRVLKPDGVFI 72 
                 5689**************************************886 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   1.4e-10     2e-07      66     107 ..      29      72 ..      20     120 .. 0.82

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 1.4e-10
   PF13847.1  66 lekl.le.esfDlvisnevlnaladpqkvlkeiervlkpggrli 107
                  e l ++ ++fD+v+s  +l+ ++d++ +l+ei+rvlkp+g++i
  MMETSP1325-20131115|4795_1  29 EEHLpFPdNTFDMVTSSLALHWVNDLPRALREIKRVLKPDGVFI 72 
                 44444999**********************************98 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0     7e-10   9.6e-07      64      99 .]      31      71 ..       9      71 .. 0.83

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 7e-10
   PF08242.7 64 g.....ssfDvvvasnvlhhlkdirevldnirklLkpgGvl 99
                      ++fD+v++s +lh+++d+ ++l++i+++Lkp+Gv+
  MMETSP1325-20131115|4795_1 31 HlpfpdNTFDMVTSSLALHWVNDLPRALREIKRVLKPDGVF 71
                1334568********************************86 PP

>> PF03141.11  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   3.7e-08     5e-05     161     217 ..      12      73 ..       5      93 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 3.7e-08
  PF03141.11 161 Rgvpavlavl......gtkrlpyPsraFdlahCsrClipwteedgilllevdRvlRpgGyfvl 217
                 R v a  a+l        ++lp+P ++Fd++  s   ++w ++    l e++Rvl+p+G f+ 
  MMETSP1325-20131115|4795_1  12 RVVVAAAAALrxslmfDEEHLPFPDNTFDMVTSS-LALHWVNDLPRALREIKRVLKPDGVFIG 73 
                 55555555544444447899***********866.578**********************985 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   2.1e-07   0.00029      59     101 .]      30      69 ..       5      69 .. 0.81

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 2.1e-07
   PF13649.1  59 ralpfeegefdlvvcaglslehlspkqlealleeiarvlkpgG 101
                 ++lpf++++fd+v+++   l+  +  +l+++l+ei rvlkp+G
  MMETSP1325-20131115|4795_1  30 EHLPFPDNTFDMVTSS---LALHWVNDLPRALREIKRVLKPDG 69 
                 6789***********4...56668889**************99 PP

>> PF05148.10  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.7e-05     0.023     112     155 ..      28      72 ..      15      86 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.7e-05
  PF05148.10 112 dlakvPledesvdvavfclslm.gtnladflkeanrvlkvGGllk 155
                 d  ++P  d++ d++   l+l  +++l   l+e++rvlk+ G++ 
  MMETSP1325-20131115|4795_1  28 DEEHLPFPDNTFDMVTSSLALHwVNDLPRALREIKRVLKPDGVFI 72 
                 66789***************964899**************99875 PP

>> PF03492.10  SAM dependent carboxyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.8e-05     0.024     103     129 ..      34      60 ..      32      80 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.8e-05
                 S-TT-BS-EEEES-TTB-SS------- CS
  PF03492.10 103 fPrkslhlvhssyslhwlSkvPkeved 129
                 fP +++++v ss +lhw+ ++P+ + +
  MMETSP1325-20131115|4795_1  34 FPDNTFDMVTSSLALHWVNDLPRALRE 60 
                 9*********************99987 PP

>> PF03291.11  mRNA capping enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   6.9e-05     0.094     138     200 ..      30      87 ..      18     104 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.9e-05
  PF03291.11 138 evfedqekkFdivswQfaiHYsFeseekaktilnnlaellasGgkviiTtpdgdkiikkLeak 200
                 e + +++  Fd+v   +a+H+    +   + +l+ ++++l++ g++i+ ++ g  +  +L++ 
  MMETSP1325-20131115|4795_1  30 EHLPFPDNTFDMVTSSLALHWV---NDLPR-ALREIKRVLKPDGVFIGAMLGGSTL-TELRQS 87 
                 566677899***********85...44455.899**********************.888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 982.04
//
Query:       MMETSP1325-20131115|4796_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|4798_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|4797_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0002   21.4  10.2    0.00033   20.7   7.1    1.3  1  PF09026.5  Centromere protein B dimerisation domain
  ------ inclusion threshold ------
      0.044   11.5   1.5      0.052   11.2   1.0    1.0  1  PF05642.6  Sporozoite P67 surface antigen
       0.18   11.3   6.1       0.23   10.9   4.2    1.1  1  PF04546.8  Sigma-70, non-essential region
       0.75    8.2  18.5          1    7.8  12.8    1.1  1  PF10446.4  Protein of unknown function (DUF2457)
        1.5    8.2  15.7       0.89    8.9   9.2    1.7  2  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   7.1   1.2e-07   0.00033      18      50 ..      18      50 ..       8      63 .. 0.79

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.2e-07
   PF09026.5 18 eeeedeeedeededeedeeeddevpvpsfgeam 50
                 +++d+++d++d+d++d+++dd+vp p+ g ++
  MMETSP1325-20131115|4797_1 18 ADDDDDDDDDDDDDDDDDDDDDDVPAPAPGASV 50
                456677777778899999999******988765 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.0   1.9e-05     0.052     227     286 ..      10      65 ..       2     107 .. 0.43

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.9e-05
   PF05642.6 227 lggvpgvgvlesnssseGeedddeeeeeenksiepgvGvpGvrv....gaatssssttspssst 286
                  g   g g  + +   + ++ddd+++++++ +  p  G + ++v              ++s+s+
  MMETSP1325-20131115|4797_1  10 AGAGAGAGADDDDDDDDDDDDDDDDDDDDDDVPAPAPGASVISVssapP--------FAASASA 65 
                 3333444444444444444444444444555555544444433322220........2222222 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   4.2   8.3e-05      0.23      46      72 ..      19      39 ..       8      59 .. 0.51

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8.3e-05
   PF04546.8 46 eddeeeeeddddddededeeeeseead 72
                +dd+++++dddddd+d+d++      d
  MMETSP1325-20131115|4797_1 19 DDDDDDDDDDDDDDDDDDDD------D 39
                22222222212222222222......1 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  12.8   0.00037         1      58      78 ..      19      39 ..      11      53 .. 0.48

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00037
   PF10446.4 58 ddeeddddeDeddddddddeD 78
                dd++dddd+D+dddddddd+D
  MMETSP1325-20131115|4797_1 19 DDDDDDDDDDDDDDDDDDDDD 39
                111111111111111122111 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   9.2   0.00032      0.89     116     136 ..      19      39 ..       8      46 .. 0.49
   2 ?   -1.2   0.0      0.42   1.1e+03      38      65 ..     112     140 ..     107     151 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00032
                 ..----XXXXXXXXXXXXXXX CS
  PF03066.10 116 deeddeedeeeeddeedddee 136
                 d++dd++d++++dd++ddd++
  MMETSP1325-20131115|4797_1  19 DDDDDDDDDDDDDDDDDDDDD 39 
                 333333333333333333333 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.42
                 E----S-B.-EEEEEEEE..GGGT.EEEE CS
  PF03066.10  38 clgeeAkd.elnvVeveaqdyegkkvkvp 65 
                  l+e+      + Ve e+   e + ++v+
  MMETSP1325-20131115|4797_1 112 FLEEGGHHlAAHRVEYEGVPLEVDATTVT 140
                 55555555566666666655555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       737  (0.0539058); expected 273.4 (0.02)
Passed bias filter:                      449  (0.0328408); expected 273.4 (0.02)
Passed Vit filter:                        93  (0.00680222); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.60
# Mc/sec: 607.08
//
Query:       MMETSP1325-20131115|4799_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00053   19.8   0.2       0.14   12.0   0.0    2.4  2  PF02754.11 Cysteine-rich domain


Domain annotation for each model (and alignments):
>> PF02754.11  Cysteine-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0     1e-05      0.14       1      80 [.      51     143 ..      51     148 .. 0.67
   2 !    5.6   0.0     0.001        14       1      52 [.     184     231 ..     184     249 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1e-05
  PF02754.11   1 vayfdgChllraa........ypevrkalkkvlealgveleel...ekesCCGagggrsgkee...laealakrnvetleetgadaivtacpgC 80 
                 v+y ++C + r +        + +v++ l  +l++ gv+ + +    +++CCG ++  +g  +    + +  +  + ++ + g  +i+   + C
  MMETSP1325-20131115|4799_1  51 VVYLPSC-VTRVMgpakgdaeQGNVHEHLLSLLKKGGVQKVSYvpkVNAQCCGLMFSSRGASDaanASIEALEPALLAASDGGRIPILCDTSPC 143
                 6788889.88877788888889999999999999888764443312689*******99999884323335555555555555555555555555 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.001
  PF02754.11   1 vayfdgChllraaypevrkalkkvlealgveleelekesCCGagggrsgkee 52 
                 va++++C     ++ +++ +++ +l+    e+++  +  CCG +g r ++ +
  MMETSP1325-20131115|4799_1 184 VAVHVPC---SSKKMKLEPIFESLLGQCADEVHFS-GIPCCGMAGDRGMRYP 231
                 7899999...4556667778888888777777765.899****999877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.57
# Mc/sec: 1322.13
//
Query:       MMETSP1325-20131115|4800_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-30  104.3   0.2    6.1e-30  103.9   0.1    1.1  1  PF00225.18 Kinesin motor domain
  ------ inclusion threshold ------
      0.029   14.6   7.1        1.1    9.5   0.6    2.6  2  PF10824.3  Protein of unknown function (DUF2580)
        6.7    6.0   6.8         23    4.2   0.2    3.7  3  PF08940.6  Domain of unknown function (DUF1918)


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.9   0.1   1.3e-33   6.1e-30     184     286 ..       2      96 ..       1      97 [. 0.91

  Alignments for each domain:
  == domain 1    score: 103.9 bits;  conditional E-value: 1.3e-33
                 HHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT.TTSS-C CS
  PF00225.18 184 ellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaenkkskhvp 286
                 +++e+g +nr++ast++n++SSRSH+i+ + ++++++          +++l LvDLAGsEr+ k+g ++++ +kEa++INkSL aLg+v+++L ++  s+h+p
  MMETSP1325-20131115|4800_1   2 DVFETGMQNRTTASTNMNADSSRSHCIMLVDVTTRSNGGAP-----STGRLYLVDLAGSERVVKSGVTGKE-MKEAQHINKSLAALGDVMASLDQK--SEHIP 96 
                 6899******************************9844332.....48******************87555.************************..***99 PP

>> PF10824.3  Protein of unknown function (DUF2580)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.5   0.00075       3.4      11      60 ..      80     129 ..      71     143 .. 0.89
   2 ?    9.5   0.6   0.00024       1.1       9      57 ..     153     201 ..     145     203 .] 0.89

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00075
   PF10824.3  11 hlrelAakhdevAaeiasavaaaagvaaavaathGpicaafnaalaeaee 60 
                 +l ++ a+ d+ ++ i sa +a+ g+++a++  +G+++a   + l++ ++
  MMETSP1325-20131115|4800_1  80 ALGDVMASLDQKSEHIPSAXRADVGDSRAAEGNLGQVAARAGDRLRAHVG 129
                 6777778899999****************************999998765 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00024
   PF10824.3   9 pahlrelAakhdevAaeiasavaaaagvaaavaathGpicaafnaalae 57 
                  + +r++   +d+vAa++ +  +a+ g+ ++++  +G+++a   + l++
  MMETSP1325-20131115|4800_1 153 VGDVRAVEVNCDQVAARAGERLRAHIGDLREAEVNLGQVAARAGDRLRA 201
                 57899999*********************************99998876 PP

>> PF08940.6  Domain of unknown function (DUF1918)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.2     0.011        49       1      24 [.     124     147 ..     116     147 .. 0.84
   2 ?    4.2   0.2    0.0051        23       1      24 [.     149     172 ..     149     180 .. 0.86
   3 ?   -1.2   0.0      0.26   1.2e+03       2      10 ..     192     200 ..     191     202 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.011
   PF08940.6   1 mkAkvGDrLvvkgrtvgepdrkge 24 
                 ++A+vGD  vvk ++ + + r ge
  MMETSP1325-20131115|4800_1 124 LRAHVGDLRVVKVNRGQVAARAGE 147
                 579999999999888888888775 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0051
   PF08940.6   1 mkAkvGDrLvvkgrtvgepdrkge 24 
                 m+A+vGD   v+ +  + + r ge
  MMETSP1325-20131115|4800_1 149 MRAHVGDVRAVEVNCDQVAARAGE 172
                 9*******9999999999999988 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 0.26
   PF08940.6   2 kAkvGDrLv 10 
                  A++GDrL 
  MMETSP1325-20131115|4800_1 192 AARAGDRLR 200
                 5999***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.59
# Mc/sec: 824.51
//
Query:       MMETSP1325-20131115|4802_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.1    7.4  11.6        2.7    7.1   8.0    1.1  1  PF03353.10 Ras-mediated vulval-induction antagonist


Domain annotation for each model (and alignments):
>> PF03353.10  Ras-mediated vulval-induction antagonist
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   8.0    0.0002       2.7     163     258 ..      52     158 ..       8     167 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0002
  PF03353.10 163 eqdevdeveveEvkeeysanlaereeeesnlsrpeavkqsskneqapktqqqpdls.....assesaniksastares.qpas..krteapksdnt....eaeqiteq 258
                 + de  +v ++E+++e  + +a++ee+ + +   +a++++ ++ ++p++ ++ ++      + +e+a+++sast ++  ++ +  ++++ ++ +++    ea q++eq
  MMETSP1325-20131115|4802_1  52 KVDEIVSVLEDEDEDEDDEAIAKEEEMAAVYAAMSAEEREAAMAEMPTSARMLMVDvdkreRDAEAAALESASTDKSDtTD-TikESDPVEAAQEVwdgaEAAQVAEQ 158
                 223333344445555555566666779999999999999999999999999999889999888999999999999999533.33555555555555778899999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1102  (0.0806027); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 782.21
//
Query:       MMETSP1325-20131115|4805_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|4806_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 388.21
//
Query:       MMETSP1325-20131115|4808_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|4810_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 619.44
//
Query:       MMETSP1325-20131115|4814_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.066   13.4   1.0      0.093   12.9   0.7    1.2  1  PF10824.3 Protein of unknown function (DUF2580)


Domain annotation for each model (and alignments):
>> PF10824.3  Protein of unknown function (DUF2580)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.7   6.8e-06     0.093       1      46 [.      19      63 ..      19      75 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.8e-06
   PF10824.3  1 mtdeLsVdpahlrelAakhdevAaeiasavaaaagvaaavaathGp 46
                m  eL+V   ++r++ + h+ +Aa+  + v+ +  +a++++++hG+
  MMETSP1325-20131115|4814_1 19 MLSELHVAERKVRRALKGHKSAAATQETKVERD-SAASNSSESHGS 63
                7789*****************************.9**********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       612  (0.044763); expected 273.4 (0.02)
Passed bias filter:                      424  (0.0310123); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 675.77
//
Query:       MMETSP1325-20131115|4816_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 305.74
//
Query:       MMETSP1325-20131115|4815_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 316.32
//
Query:       MMETSP1325-20131115|4818_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00024   20.7   0.3    0.00041   20.0   0.0    1.5  2  PF13374.1  Tetratricopeptide repeat
    0.00065   19.4   0.1    0.00072   19.3   0.0    1.1  1  PF13424.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.049   13.4   1.1       0.06   13.1   0.2    1.5  2  PF07719.12 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   9.1e-08   0.00041      14      41 ..       5      32 ..       2      33 .. 0.93
   2 ?   -2.1   0.0      0.81   3.7e+03      10      37 ..      39      42 ..      36      45 .. 0.50

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 9.1e-08
   PF13374.1 14 argryeeAlaleeealairrrllGddHP 41
                + ++ e+A++++ +ala+ ++l G++HP
  MMETSP1325-20131115|4818_1  5 QADDQEQARKWLKKALALSKKLKGREHP 32
                66899**********************9 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.81
   PF13374.1 10 lalrargryeeAlaleeealairrrllG 37
                ++l                        G
  MMETSP1325-20131115|4818_1 39 RLL------------------------G 42
                444........................4 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.6e-07   0.00072      17      55 ..       5      44 ..       1      50 [. 0.79

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 1.6e-07
   PF13424.1 17 rlgdydeAlelyekalel.lrelgddhpdtaralnnlanl 55
                +  d ++A+++++kal+l  ++ g++hp t ++ + l+++
  MMETSP1325-20131115|4818_1  5 QADDQEQARKWLKKALALsKKLKGREHPGTKNVGRLLGDY 44
                67899*************666669****987776666665 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   1.3e-05      0.06      12      32 ..       4      24 ..       2      26 .. 0.88
   2 ?   -2.2   0.0       1.1   4.9e+03      14      17 ..      41      44 ..      39      48 .. 0.69

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.3e-05
                HHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12 12 yklgdyeeAleafekAleldP 32
                ++++d e+A+++++kAl+l  
  MMETSP1325-20131115|4818_1  4 MQADDQEQARKWLKKALALSK 24
                678999************986 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 1.1
                TT-H CS
  PF07719.12 14 lgdy 17
                lgdy
  MMETSP1325-20131115|4818_1 41 LGDY 44
                6777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|4819_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0047   17.0   1.7     0.0047   17.0   1.2    1.7  2  PF05130.7  FlgN protein
  ------ inclusion threshold ------
      0.046   12.3   0.1      0.056   12.0   0.1    1.2  1  PF03097.13 BRO1-like domain
      0.057   11.3   2.9      0.076   10.9   2.0    1.1  1  PF07111.7  Alpha helical coiled-coil rod protein (HCR)
      0.069   13.2   1.3       0.58   10.2   0.1    2.2  2  PF08581.5  Tup N-terminal
       0.63    9.9   4.4       0.92    9.4   1.1    2.2  2  PF09403.5  Adhesion protein FadA
       0.67    9.5   4.8        7.2    6.3   0.1    3.0  4  PF02183.13 Homeobox associated leucine zipper
        1.8    7.5   6.5       0.26   10.3   1.4    1.8  2  PF06008.9  Laminin Domain I


Domain annotation for each model (and alignments):
>> PF05130.7  FlgN protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.72   1.4e+03      22      38 ..       2      18 ..       1      28 [. 0.70
   2 !   17.0   1.2   2.4e-06    0.0047      19      82 ..      44     115 ..      38     133 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.72
   PF05130.7 22 elleeEqeaLkagdiea 38
                e+l++E eaL ++  + 
  MMETSP1325-20131115|4819_1  2 ETLKAEFEALGKRHEDV 18
                67888999998884333 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 2.4e-06
   PF05130.7  19 eLlelleeEqeaLkagdieaLeelteeKeellaeleeleeerqklleelgle..aeeatlsella......e 82 
                  L e+l++E eaL ++    +e+ t+ K+e+ ++l++l ++   l+++ ++   +e++ +++ll+       
  MMETSP1325-20131115|4819_1  44 DLMETLKAEFEALGKRHETHFESHTQTKNEHGRALAALSAAVMGLTDAKNEAekKEAREVEKLLKrgaflrG 115
                 699*************99****************************99999888888888888885554443 PP

>> PF03097.13  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   2.8e-05     0.056     243     289 ..      62     107 ..      12     112 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.8e-05
  PF03097.13 243 yyqalaleekkkyGeaiarLqeAlellkealklakkckskselledl 289
                  +   + ++k+++G a+a L +A   l++a+++a+k k++ e+++ l
  MMETSP1325-20131115|4819_1  62 THFESHTQTKNEHGRALAALSAAVMGLTDAKNEAEK-KEAREVEKLL 107
                 344455699**********************99999.6666666555 PP

>> PF07111.7  Alpha helical coiled-coil rod protein (HCR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.0   3.9e-05     0.076     133     192 ..      44     106 ..      39     123 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.9e-05
   PF07111.7 133 nleegkqkeleevqrlhqeqlssltqahee...alsslaskaeglekslssletrrageakel 192
                 +l e+ + e+e++ + h+ +  s tq+++e   al +l++ + gl ++ ++ e + a e  +l
  MMETSP1325-20131115|4819_1  44 DLMETLKAEFEALGKRHETHFESHTQTKNEhgrALAALSAAVMGLTDAKNEAEKKEAREVEKL 106
                 57789999******************85543339*************************9887 PP

>> PF08581.5  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.14   2.8e+02       7      20 ..       2      15 ..       1      27 [. 0.73
   2 ?   10.2   0.1    0.0003      0.58       4      61 ..      44      98 ..      42     110 .. 0.58

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.14
   PF08581.5  7 dairaEfealsrea 20
                + ++aEfeal +  
  MMETSP1325-20131115|4819_1  2 ETLKAEFEALGKRH 15
                67999**9998743 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.0003
   PF08581.5  4 eLLdairaEfealsreassykaqkedyelk...iqqqiqEleqirqtvyeLeqahrkikek 61
                +L++ ++aEfeal +        +  +e++    +++   l+++   v+ L  a+++  +k
  MMETSP1325-20131115|4819_1 44 DLMETLKAEFEALGKRH------ETHFESHtqtKNEHGRALAALSAAVMGLTDAKNEAEKK 98
                8************9832......23333320113334445566666666666666555555 PP

>> PF09403.5  Adhesion protein FadA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.25   4.9e+02      32      49 ..       4      21 ..       2      29 .. 0.60
   2 ?    9.4   1.1   0.00047      0.92      22      73 ..      39      90 ..      35     109 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.25
   PF09403.5 32 leaeYqdLvkkeeaRfee 49
                l+ae+++L k+ e+  +e
  MMETSP1325-20131115|4819_1  4 LKAEFEALGKRHEDVLKE 21
                566666666665554444 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00047
   PF09403.5 22 aaevvselkaleaeYqdLvkkeeaRfeeekeekeaaekevaklkelkaelee 73
                aae    +++l+ae+++L k+ e  fe   + k+   +++a l    ++l +
  MMETSP1325-20131115|4819_1 39 AAECYDLMETLKAEFEALGKRHETHFESHTQTKNEHGRALAALSAAVMGLTD 90
                455556678899***************9999888777766666555554443 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1    0.0037       7.2       8      27 ..       2      21 ..       2      26 .. 0.70
   2 ?    4.3   0.0     0.016        30      15      25 ..      47      57 ..      41      62 .. 0.74
   3 ?   -3.1   0.0       3.2   6.2e+03      30      40 ..      80      90 ..      78      93 .. 0.79
   4 ?   -2.5   0.1         2   3.9e+03      26      32 ..     101     107 ..     100     109 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0037
  PF02183.13  8 elLKrnydaLkaendsLqkE 27
                e+LK+ ++aL  +++ ++kE
  MMETSP1325-20131115|4819_1  2 ETLKAEFEALGKRHEDVLKE 21
                56777777777777776666 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.016
  PF02183.13 15 daLkaendsLq 25
                ++Lkae+++L 
  MMETSP1325-20131115|4819_1 47 ETLKAEFEALG 57
                57788887774 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 3.2
  PF02183.13 30 kLraevlsLke 40
                +L a v+ L++
  MMETSP1325-20131115|4819_1 80 ALSAAVMGLTD 90
                78899999986 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 2
  PF02183.13  26 kEkekLr 32 
                 +E+ekL+
  MMETSP1325-20131115|4819_1 101 REVEKLL 107
                 5777775 PP

>> PF06008.9  Laminin Domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       0.4   7.8e+02      54      78 ..       2      26 ..       1      28 [. 0.74
   2 ?   10.3   1.4   0.00013      0.26     154     216 ..      50     109 ..      42     131 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.4
   PF06008.9 54 skLaqdaenLqkkankalakaqkvn 78
                ++L++++e+L k+   +l ++  ++
  MMETSP1325-20131115|4819_1  2 ETLKAEFEALGKRHEDVLKETRLTR 26
                5788899999998888887776655 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00013
   PF06008.9 154 lkaAeeLlsrvqtlfqklqeenegllealkddLneyeakLsDlrelldeaqak.trdAerlnla 216
                 ++++e+L++r +t f+++ +  +       + L+ ++a ++ l ++ +ea++k +r++e+l+++
  MMETSP1325-20131115|4819_1  50 KAEFEALGKRHETHFESHTQTKNEH----GRALAALSAAVMGLTDAKNEAEKKeAREVEKLLKR 109
                 6899**********97765554444....778*********************99*****9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       785  (0.0574166); expected 273.4 (0.02)
Passed bias filter:                      592  (0.0433002); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.55
# Mc/sec: 697.12
//
Query:       MMETSP1325-20131115|4821_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.29s 00:00:00.60 Elapsed: 00:00:00.57
# Mc/sec: 256.16
//
Query:       MMETSP1325-20131115|4822_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.70
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|4813_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-07   29.0   0.0    2.1e-06   27.6   0.0    1.7  2  PF02469.17 Fasciclin domain
  ------ inclusion threshold ------
      0.053   12.7   0.0      0.077   12.2   0.0    1.1  1  PF03505.9  Clostridium enterotoxin


Domain annotation for each model (and alignments):
>> PF02469.17  Fasciclin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.2   8.1e+03      25      31 ..      19      25 ..       2      27 .. 0.60
   2 !   27.6   0.0   3.1e-10   2.1e-06       3     120 ..      74     186 ..      72     191 .. 0.75

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.2
                CEEEEEE CS
  PF02469.17 25 glTvFaP 31
                g T FaP
  MMETSP1325-20131115|4813_1 19 GATAFAP 25
                6799999 PP

  == domain 2    score: 27.6 bits;  conditional E-value: 3.1e-10
                 HHHHHHHHHTT-HCHHHGHTSSCEEEEEE-HHHHHHHHHCHCHCCHCGHHHHHHHHHCTEECCSS-HHHHHHHHHEEBCCC-EEEEEEE---EEEEEE...........EEEEEEEEE------EEEES CS
  PF02469.17   3 fstfvsllekaglaeeLnkkqgglTvFaPtneAfaklppetlafllkdkkklkaiLkyHvvpetvsssdlkkaeqlatlegaklrvnikgngtvtvng...........karvvrsdieatngvihvid 120
                 f++f+++l k+g+ +      g++T+ aPt+ A           l ++++   +++kyH+++++v + ++   +   tl g+ ++ ++  + + ++++           + +    d++ +ng+ih+i 
  MMETSP1325-20131115|4813_1  74 FNKFADALAKSGVDTSS----GEYTIYAPTDTAC---------DLVNSPELTPDVVKYHITEGRVPKGSIAGDQ--MTLTGKAMTYKYF-SRQTFLDDavigqvpqgaaTGQSYPVDVAFDNGLIHTIA 186
                 89999999999988554....68**********9.........67789***********************985..4455666666666.333444443333366666655556679999999999996 PP

>> PF03505.9  Clostridium enterotoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.1e-05     0.077      77     132 ..      67     124 ..      62     130 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.1e-05
   PF03505.9  77 yikvYntYekYelieyqnGnisdkaey..Ylpslgylevtdapslgaevvetpideds 132
                  ik Y+t++k+     + G  + ++ey  Y p+   ++ ++ p l  +vv+ +i e+ 
  MMETSP1325-20131115|4813_1  67 EIKGYDTFNKFADALAKSGVDTSSGEYtiYAPTDTACDLVNSPELTPDVVKYHITEGR 124
                 589********999999998888887555*************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1028.44
//
Query:       MMETSP1325-20131115|4820_1  [L=349]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      9e-37  126.7   0.0    1.9e-36  125.7   0.0    1.4  1  PF14323.1 GxGYxY sequence motif in domain of unknown function


Domain annotation for each model (and alignments):
>> PF14323.1  GxGYxY sequence motif in domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.7   0.0   1.4e-40   1.9e-36     176     449 ..      10     303 ..       2     313 .. 0.88

  Alignments for each domain:
  == domain 1    score: 125.7 bits;  conditional E-value: 1.4e-40
                 EE---TTS----HHHHHH---EE---TT---HHHHTT--------..................-----------TT-EEEEEEE-----HHHHH..------TTSTT--------B--TTHHHH-HHHHHHHHHH-------BB------B--GGGS-HHHHHHHHHHHHHHHHH----EEEEE-SSGGG-HHHHHHHHHSTT--EEEEE-------......--EEE-----EEEE--EEE-----------HHHHHHHHHHS---TTS----EEEEE-TTT--HHHHHHHH----TT CS
   PF14323.1 176 vlGWwgkdegqgvklaSkygistiasdwlaNlsvlsgisrtvnlk..................qkpakpeklelenkvYvafilsDGDnlqylq..hakkklwdsparGkiplgWtispslvdlaPavlnyyyesatpndnfiagpSGvGYmypskipkekLdelvkktneymeradlrvvtIldnseganrevgnkylkqpnidglfyedygeqne.....kgritvsrnskpvisergllwekldsenelkeeeitaqinsaaaniekapsFllvqvhvWskntdkvkevinsLnen 449
                  +GW   de++ v +  k g  + asd++ N++++++ ++ v  +                  ++++ + ++e+ +++ vafi+sDGDnlq+lq  +  +  ++sp+rG++p+ W+ +p ++ l+P +l++  ++ t nd + agpSG GY++p+ +p+   ++  + t  +m+ ++++ v+++      +re  ++ + q+ i+ ++y  +g ++      +g+++++ ++ pv++ r  lw++  s +e+ ++ + ++++   +n++    +++v v + s+n+++v+ + ++L e+
  MMETSP1325-20131115|4820_1  10 AFGW-TGDEHEFVAIXDKSGAVVHASDFFLNMAFFANLPNDVYEEvneprysatnareevvvfENEKENVQEEERDVHTVAFIMSDGDNLQILQndFVTERFFNSPERGHLPVSWSYAPCMAVLMPNALEWARSQLTANDTLSAGPSGIGYAFPQLFPQGVDQAHAQATSLLMRASGQSLVNVIGVVP--SRESLSQLVVQDAIKSVVYFTFGPASMgysalHGNVDMQ-QGVPVVAPRLNLWGEDASGDEVGVQGLVDELSTMPKNANLTSGYSIVVVTP-SHNYSDVVRAGEMLMEQ 303
                 69**.789******************************99776556688999999999998873333333348899******************889999***********************************************************9999*********************9888..445788899999999999999998776788889999888.9************8888878889**********9999999****7777766.56688888888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.32s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1520.60
//
Query:       MMETSP1325-20131115|4825_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0013   18.6   0.9     0.0028   17.6   0.0    1.9  3  PF13273.1 Protein of unknown function (DUF4064)
  ------ inclusion threshold ------
      0.029   13.9   0.0       0.14   11.7   0.0    2.0  2  PF13903.1 PMP-22/EMP/MP20/Claudin tight junction


Domain annotation for each model (and alignments):
>> PF13273.1  Protein of unknown function (DUF4064)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2       1.2   8.1e+03      67      95 ..       7      13 ..       2      22 .. 0.44
   2 !   17.6   0.0     4e-07    0.0028       7      81 ..      32      98 ..      31     105 .. 0.80
   3 ?   -2.9   0.1         1   6.9e+03      63      76 ..     147     160 ..     122     166 .. 0.61

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1.2
   PF13273.1 67 ilsilgiigsilvkkkpklsGilfiiaai 95
                                       ++i++i
  MMETSP1325-20131115|4825_1  7 A----------------------IVISGI 13
                2......................222222 PP

  == domain 2    score: 17.6 bits;  conditional E-value: 4e-07
   PF13273.1  7 vLgliGgilgilagllalvigilgsselkkeeqeeaeeleeetildllstlvlilgvlaiilsilgiigsilvkk 81
                + g+i+g+ +il++l+++++ + ++ e ++++       e++++ d + +l ++++v + + ++lgi +s++++ 
  MMETSP1325-20131115|4825_1 32 IVGTISGVSMILFSLMIMFFPSTDE-EDDDDT-------ESDKDDDEVTKLPWTFYVAVALPCVLGILISLFISS 98
                6799999999999999999999987.322222.......2344567899*********************99975 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 1
   PF13273.1  63 vlaiilsilgiigs 76 
                  +a+ + ++gi  +
  MMETSP1325-20131115|4825_1 147 YGAVEVAVVGIFCF 160
                 34444555555554 PP

>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     2e-05      0.14      76     160 ..       3      85 ..       2      97 .. 0.72
   2 ?   -2.5   2.1      0.46   3.2e+03      91      91 ..     131     131 ..      82     205 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2e-05
   PF13903.1  76 llglvlillaavlallaslkksktlllltgvllllagilillavvlyvqkvqleikrnvqtwqselqnnvlaslgwSfylvvvgi 160
                 l++++ ++ ++ ++l as kk+    +++ v ++ ++++il  +++++    +e +++ +t+++ + ++   +l w fy++v+  
  MMETSP1325-20131115|4825_1   3 LISVAIVISGITCGLTASHKKPDWRSKFNIVGTISGVSMILFSLMIMFFPSTDE-EDDDDTESDKDDDE-VTKLPWTFYVAVALP 85 
                 8999999****************8788887777766666666665555555444.56667777777666.779*******99744 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.46
   PF13903.1  91 l 91 
                 +
  MMETSP1325-20131115|4825_1 131 M 131
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       671  (0.0490784); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.40s 00:00:01.05 Elapsed: 00:00:00.56
# Mc/sec: 1223.85
//
Query:       MMETSP1325-20131115|4826_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-24   83.6   0.0    1.1e-23   83.4   0.0    1.0  1  PF00815.15 Histidinol dehydrogenase


Domain annotation for each model (and alignments):
>> PF00815.15  Histidinol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.4   0.0   7.9e-28   1.1e-23      11     148 ..      11     149 ..       3     153 .] 0.90

  Alignments for each domain:
  == domain 1    score: 83.4 bits;  conditional E-value: 7.9e-28
                 ---HHHHHHHHHHHHHHH---HHHHHHHHHSSSS-.-SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHTT-.---EEEES----EEEEEEEE-SEE-EE--------THHHHHHHHHHHH----EEEEEE-SS CS
  PF00815.15  11 kvdeilkkvkeiieavkeeGdkalleytekfdgve.leklrvsaeeleealeeldeelkealevaieniekfHaaqleskelkvetepgvvvgqvvrpiekvGlYvPgGkavlpStvlmlavPAkvAGvkkivlasPpk 148
                  ++++ ++ k i+ +vk++G+++lle + ++   +      +s++ +e+a+++l ++ +  l++++ +i++f +aql s + +    pg ++g+++ p+++ G+Y PgG+ +lpS+vlm+av A++AG+ ++ +asP  
  MMETSP1325-20131115|4826_1  11 VNAKAREQAKAILAEVKSKGEEGLLEAAVRLGDLTeGAPHLLSKDDCEAAYRALPKDQQGLLDRTAARIRTFAEAQLASVSSTEIDIPGGRAGHTIAPVNAAGCYAPGGRYPLPSSVLMTAVTARTAGCGEVWVASPRP 149
                 45678999********************999766615556899**********************************87777777789*************************************************65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 705.08
//
Query:       MMETSP1325-20131115|4828_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00066   19.6   0.4     0.0028   17.6   0.3    2.0  1  PF05837.7 Centromere protein H (CENP-H)
  ------ inclusion threshold ------
      0.017   14.7   3.7      0.023   14.2   2.6    1.2  1  PF10721.4 Protein of unknown function (DUF2514)


Domain annotation for each model (and alignments):
>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.3   4.1e-07    0.0028      52     102 ..      92     152 ..      55     156 .. 0.62

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 4.1e-07
   PF05837.7  52 e.....deelkeklekleaelkks.....kkkwevvknvaqalivgSgvnWaeDpkLrdlv 102
                 +     +++++ + ++  +++++      ++   ++++ +  l  g+gvnWa+Dp Lr+l 
  MMETSP1325-20131115|4828_1  92 DscrelQQSNRDAFARGPENVEERppcrdQDENMILRHLLLSLAGGTGVNWAADPTLRELL 152
                 255556666666666666666543222115566788999999999*************996 PP

>> PF10721.4  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.6   3.3e-06     0.023      55      98 ..      61     104 ..      54     132 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.3e-06
   PF10721.4  55 eeqrRqaaaeeaakdAqeeaaaaradAadAeaaadrLrqeadkl 98 
                  e rR +a++e+a +  ++++aara+A dAe++   L+q  ++ 
  MMETSP1325-20131115|4828_1  61 VEVRRRDAKNEEALRLVKQLEAARAAARDAEDSCRELQQSNRDA 104
                 58899*********************************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       607  (0.0443973); expected 273.4 (0.02)
Passed bias filter:                      474  (0.0346694); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 772.70
//
Query:       MMETSP1325-20131115|4824_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.43s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1143.26
//
Query:       MMETSP1325-20131115|4827_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.47s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1217.35
//
Query:       MMETSP1325-20131115|4830_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.43s 00:00:00.68 Elapsed: 00:00:00.64
# Mc/sec: 123.56
//
Query:       MMETSP1325-20131115|4832_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.64
# Mc/sec: 235.89
//
Query:       MMETSP1325-20131115|4829_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-20   71.1   4.3    5.7e-20   71.1   3.0    2.1  2  PF01569.16 PAP2 superfamily
    0.00017   21.0   3.4     0.0038   16.6   2.3    2.5  1  PF14378.1  PAP2 superfamily
     0.0045   17.1   1.4     0.0045   17.1   0.9    2.6  2  PF14360.1  PAP2 superfamily C-terminal


Domain annotation for each model (and alignments):
>> PF01569.16  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   3.0   1.3e-23   5.7e-20       9     122 ..      70     185 ..      62     192 .. 0.89
   2 ?   -1.3   0.3      0.31   1.4e+03     106     122 ..     202     218 ..     201     225 .. 0.83

  Alignments for each domain:
  == domain 1    score: 71.1 bits;  conditional E-value: 1.3e-23
                 H---GGG...HHHTTT---TTT----HHHHH--------S-SS----TTT---HHHHHHHH--------.......-B----HHHHHHHHH---TT-----TT----------HHHHHHHH CS
  PF01569.16   9 lllaalistvlKalfgrpRPdvlarddilldptegkaslfpsfPSgHaafafaaalllalllkrklgkr.......vllallllilallvalsRvylgvHfpsDvlaGlllgiliallvyl 122
                 l+ +  +  ++K ++ r RP+++ +   +  p+e++     sfPSgHa  +f+++  l+   ++    r       ++   +l+++a+lv++sRv  g H+p+Dv++G+ +g+++++l+  
  MMETSP1325-20131115|4829_1  70 LGVCCSVECFFKLIWRRVRPEYAKQSASYVLPGEKF-----SFPSGHALRVFCLVHWLRSSHHSVALLRisslpaqSVETPWLWVWAALVGWSRVAKGKHYPFDVVVGAAIGWAVGALLEG 185
                 34444445679*****************99998876.....***********************************9999***********************************998765 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.31
                 ---------HHHHHHHH CS
  PF01569.16 106 vlaGlllgiliallvyl 122
                 vl+G++l ++++l++ +
  MMETSP1325-20131115|4829_1 202 VLGGVMLTTAWGLWYCV 218
                 79999999999998865 PP

>> PF14378.1  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.3   8.3e-07    0.0038     126     188 ..     105     179 ..      88     182 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 8.3e-07
   PF14378.1 126 iafpSlHvavavlvalalrrlqrlrllr.avfi............alnvlmtvsvlatggHYviDlvaGaavalll 188
                  +fpS+H+   v++ + ++r + + +++ ++++            ++++l+  s +a g+HY  D+v+Gaa+++++
  MMETSP1325-20131115|4829_1 105 FSFPSGHA-LRVFCLVHWLRSSHHSVALlRISSlpaqsvetpwlwVWAALVGWSRVAKGKHYPFDVVVGAAIGWAV 179
                 58999996.56899999999666666541222112222222333379999999*******************9986 PP

>> PF14360.1  PAP2 superfamily C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.9   9.9e-07    0.0045       8      67 ..     109     178 ..     107     184 .. 0.76
   2 ?   -0.8   0.6      0.36   1.6e+03      14      49 ..     207     242 ..     205     249 .. 0.75

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 9.9e-07
   PF14360.1   8 SGHtvvltlavlfiteyspkrlkl...........lkvillllslvgvfliiasreHYtvDVllglyistl 67 
                 SGH++ ++ +v+++ + ++++  l              +l++++++     +a+ +HY  DV++g  i+ +
  MMETSP1325-20131115|4829_1 109 SGHALRVFCLVHWLRSSHHSVA-LlrisslpaqsvETPWLWVWAALVGWSRVAKGKHYPFDVVVGAAIGWA 178
                 7887766655555554444443.3477777777767889**************************999765 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.36
   PF14360.1  14 ltlavlfiteyspkrlkllkvillllslvgvfliia 49 
                 ++++++ ++++ p++   +++ +l++ ++++f++ +
  MMETSP1325-20131115|4829_1 207 MLTTAWGLWYCVPQMQRAVNLRSLYVPAAIYFVFYL 242
                 667777888888888888888888888888877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.31s 00:00:00.87 Elapsed: 00:00:00.63
# Mc/sec: 1023.21
//
Query:       MMETSP1325-20131115|4833_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   16.8   0.3     0.0028   16.8   0.2    1.7  2  PF01595.15 Domain of unknown function DUF21
     0.0067   15.9   0.0     0.0093   15.5   0.0    1.3  1  PF04341.7  Protein of unknown function, DUF485


Domain annotation for each model (and alignments):
>> PF01595.15  Domain of unknown function DUF21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.13     9e+02     116     136 ..      25      45 ..      17      48 .. 0.50
   2 !   16.8   0.2   4.1e-07    0.0028       4      33 ..      68      97 ..      65     100 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.13
  PF01595.15 116 erialllapplrvllkllyPl 136
                 ++ +++  +++  ll  ++P+
  MMETSP1325-20131115|4833_1  25 LASSSVALRFTLPLLMAVTPA 45 
                 444445555555554444444 PP

  == domain 2    score: 16.8 bits;  conditional E-value: 4.1e-07
  PF01595.15  4 liivlllllsaffsaaEtAlvslsrsrlee 33
                l++v+l++ls++fs+++++l+ l+ + l++
  MMETSP1325-20131115|4833_1 68 LLMVVLICLSGLFSGLTLGLLGLDMNGLRI 97
                899********************9988875 PP

>> PF04341.7  Protein of unknown function, DUF485
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.4e-06    0.0093      24      70 ..      28      75 ..      14      81 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.4e-06
   PF04341.7 24 lmlvlYfgfillvafapellgtklaeG.aitvgillglgqfvltfllt 70
                  ++l f+++ll+a++p++ +   +++  +t g++++++ +++ +l++
  MMETSP1325-20131115|4833_1 28 SSVALRFTLPLLMAVTPAVQADDCGDDgGMTQGMPAAFAYLLMVVLIC 75
                5677889******************988**************999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 484.06
//
Query:       MMETSP1325-20131115|4834_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00072   19.2   0.1    0.00097   18.7   0.1    1.2  1  PF00627.26 UBA/TS-N domain
     0.0048   16.2   0.0     0.0072   15.7   0.0    1.2  1  PF02845.11 CUE domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.1   1.4e-07   0.00097      12      37 .]       1      26 [.       1      26 [. 0.97

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1.4e-07
                ----HHHHHHHHHHTTTSHHHHHHHH CS
  PF00627.26 12 MGfsreeakkALratnnnvErAveyL 37
                M++s e a+ AL+at+ nv +A+eyL
  MMETSP1325-20131115|4834_1  1 MNVSSEVARTALQATGHNVRAAMEYL 26
                89999********************9 PP

>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0     1e-06    0.0072      14      40 ..       2      28 ..       2      28 .. 0.96

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1e-06
                TS-HHHHHHHHHHSTTTHHHHHHHHHH CS
  PF02845.11 14 dldeevIravLrasngnvEaainaLLe 40
                ++++ev r +L+a++ nv aa+++LLe
  MMETSP1325-20131115|4834_1  2 NVSSEVARTALQATGHNVRAAMEYLLE 28
                6899**********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.59
# Mc/sec: 219.33
//
Query:       MMETSP1325-20131115|4835_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 403.60
//
Query:       MMETSP1325-20131115|4837_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 368.67
//
Query:       MMETSP1325-20131115|4838_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 633.00
//
Query:       MMETSP1325-20131115|4839_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.28   11.6   3.0       0.44   11.0   2.1    1.4  1  PF13470.1 PIN domain


Domain annotation for each model (and alignments):
>> PF13470.1  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.1   3.2e-05      0.44      48     106 ..      54     121 ..      10     123 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.2e-05
   PF13470.1  48 l.......areldknqfkasaeekalllekvalera..kavepdeelrpllklrDpdDahvlaaAlaa 106
                 l       ar++++ + +a++++ +++++  +le++    v+  +elr+  +  D+ Da ++ +A++a
  MMETSP1325-20131115|4839_1  54 LearllarARRQPRAELGAQRGRHEAEEAAGLLEQVlrFLVDSLKELRVGQQDHDRSDARHARCAVRA 121
                 333334334444444444555555555444447776787788888999999889***********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|4840_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 355.32
//
Query:       MMETSP1325-20131115|4842_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   56.7   0.0    1.6e-15   56.5   0.0    1.1  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.5   0.0   1.2e-19   1.6e-15     282     335 .]       4      57 ..       1      57 [. 0.96

  Alignments for each domain:
  == domain 1    score: 56.5 bits;  conditional E-value: 1.2e-19
                 TSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
  PF00225.18 282 skhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakni 335
                 +kh+pYR+  LT+l+ ds+gg++kt+m+v++sp++ n+ e++++L+fa r+kn+
  MMETSP1325-20131115|4842_1   4 TKHIPYRNHTLTTLMSDSIGGSAKTVMMVCCSPADYNAVESVNALSFALRCKNV 57 
                 79**************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       726  (0.0531012); expected 273.4 (0.02)
Passed bias filter:                      613  (0.0448362); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.61
# Mc/sec: 381.06
//
Query:       MMETSP1325-20131115|4836_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.33    9.0  15.1       0.38    8.8  10.4    1.1  1  PF09770.4  Topoisomerase II-associated protein PAT1
        7.7    6.2   9.6      0.091   12.2   1.1    2.1  2  PF02809.15 Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  10.4   5.6e-05      0.38      99     254 ..      76     239 ..      21     269 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 5.6e-05
   PF09770.4  99 tstqspkqsggekstdpesipdlqldeslwgtakkpe....qqpaqapesqpqaaakakkllsleeveaqlqqrqqaqqlpqppaqvlpqqspprqaalpqqakpelpsqypqppq....qlqqevqqqlqqapsqapaqaplpaqlpqqlqnlqqqqlpqlsq 254
                  st s + ++ +++ d+++  +++l+ sl++ +++ +    + pa+  +s  +aa+ a   ++  e ea+++++++ +  + + a+ + q++pp+ aa p+ ++p+ p++ p +      + + + q+ + +a+++a  + ++ +++p+++++ +++++++ + 
  MMETSP1325-20131115|4836_1  76 PSTMSASGQEIDQQYDDDYMLQMALQMSLQQPEPAVAtadaETPAADASSTSEAATDAAAAMEVAEAEAEAAPATADDTSAGAGAMDVVQEAPPPAAATPAASAPPTPPAAPAATCtsstPVPAASQPVVAEAEAAAATTTAAATEAPSPVKQPKKKKVKKSKF 239
                 22234455555566666788888888888876666667766555555566666666666777777777777777777777777777777777777777777777777766665322232111222222233333333333333444444444444444433333 PP

>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.1   1.3e-05     0.091       2      17 ..      91     106 ..      91     107 .. 0.90
   2 ?   -5.0   0.9         2   1.4e+04       3       5 ..     254     256 ..     253     257 .. 0.47

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.3e-05
                 CCHHHHHHHHHHHHHH CS
  PF02809.15   2 sEEedLqlALalSlee 17 
                 +++ +Lq AL++Sl+ 
  MMETSP1325-20131115|4836_1  91 DDDYMLQMALQMSLQQ 106
                 6889**********96 PP

  == domain 2    score: -5.0 bits;  conditional E-value: 2
                 CHH CS
  PF02809.15   3 EEe 5  
                 EEe
  MMETSP1325-20131115|4836_1 254 EEE 256
                 555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       964  (0.0705091); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.38s 00:00:01.25 Elapsed: 00:00:00.54
# Mc/sec: 1238.12
//
Query:       MMETSP1325-20131115|4843_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 904.75
//
Query:       MMETSP1325-20131115|4844_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0025   17.6   0.1      0.015   15.1   0.0    2.0  2  PF01833.19 IPT/TIG domain


Domain annotation for each model (and alignments):
>> PF01833.19  IPT/TIG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.1e-06     0.015      11      59 ..      34      86 ..      32     101 .. 0.76
   2 ?   -0.2   0.0     0.067   9.2e+02      20      28 ..     140     148 ..     126     155 .. 0.61

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.1e-06
  PF01833.19 11 gsssg.GttititGsnFgtdsedssvtiggtectvtv....svsstsivcttPp 59
                g++++ G+ +t++G++F +++ + +v i++   +  +     + s  +v+t P+
  MMETSP1325-20131115|4844_1 34 GTFCAaGDELTLQGTGF-IETANAKVSIDSGVEEKAYveaaVSPSGGVVFTMPE 86
                566666***********.********9998776666555655555566666665 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.067
  PF01833.19  20 titGsnFgt 28 
                   +G+nFg+
  MMETSP1325-20131115|4844_1 140 AMNGQNFGG 148
                 346666633 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 855.84
//
Query:       MMETSP1325-20131115|4831_1  [L=656]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.7e-257  853.9   3.6   4.2e-257  853.7   2.5    1.0  1  PF00012.15 Hsp70 protein
    1.7e-15   56.3   0.1    1.7e-13   49.7   0.0    2.3  2  PF06723.8  MreB/Mbl protein
     0.0034   16.9   0.1      0.013   15.0   0.0    2.0  1  PF02782.11 FGGY family of carbohydrate kinases, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  853.7   2.5  9.3e-261  4.2e-257       2     600 ..       4     617 ..       3     619 .. 0.98

  Alignments for each domain:
  == domain 1    score: 853.7 bits;  conditional E-value: 9.3e-261
                 EXEEXXXXEEBXEEEXXXXEEEXXXTTXXSSEESEEEEXXXSEEXXXCCCTTTTTTGGGEEEXGGGTXXXBTTSTTHHHHHHHXSSEEEEETTTEEEEEEEXX..EEEEXHHHHHHHHHHHHHHHHHHHHSS.XXEEEEEEXTTXXHHHHHHHHHHHHHXXXEEEEEEEHHHHHHHHXXXTTSX.......XEEEEEEEEXXXXEEEEEEEEEXXEEEEEEEEEETTXXXXHHHHHHHHHHHHHHHHHSS.XGGGSHHHHHHHHHHHHHHHHHTTCSSCSEEEEEEEEEETXTEEEEEEEEHHHHHHHCHHHHCTTTHHHHHHHHHCTXXCCCESEEEEEXXETTSHHHHHHHHHHTX.XXEEXSSXTTTTTTXXXTTCHHHCSSS...SXXXXXXECEEESS-E-EEEEE--EEEEESTTCESSEEEEEEEEESCCCESSEEEEEEES-GSSGGGSEEEEEEEEE---S-------EEEEEEE-----EEEEEEESE---EEEEEE-TT--.--HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC.....GGGSSHHHH...HHHHHHHHHHHHHHT----HHHHHHHHHHHHHCHHHHHHHH CS
  PF00012.15   2 iGiDLGttnsvvavmeggkvevianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvkrliGrkfsdpevqkeikhlpykvvkkengkavvevealgekkkftpeeisamvLkklketaeaylgekvtdavitvPaYFndaqRqatkdAgkiAGLnvlRivneptaaalaYGldkkd......kernvlvfDlGggtfdvSileiedGvfevkatagDthlGGedfDealvehlveefkkkegidlskdkkalqrLreaaekaKkeLSsssqteinleietldedgkdlsekltRakfeeLvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsksvnpDeavAiGaAvqaavlsge...eevkdllllDvtpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelakdnkllgkfeltgippaprGvpqieVtfdidanGiltvsakdkstgkeekitieaseg.lsedeiekmvkeaeesaeedkkkkeaieakneleelvyslekkleee.....kekvseaek...ekkveeaieelkeelegedkeeieakleelekvvekivekl 600
                 iGiDLGtt+s+v+v+ +++ve++an++gnrttPs+vaF+++er++G+aAk+qa+tn+ ntvf++krliGr+f+dp++q+++kh+p++vv+ +  k+++ev+++ge+k+f++eeis+mvL+k+ketaeaylg+ v +avitvPaYFnd+qRqatkdAg+iAGLnv+Ri+neptaaa+aYGldkk+       e+nvl+fD GggtfdvS+l+i+dG+fevkatagDthlGGedfD++lv+++ +efk+++++d+s +++al+rLr+a+e+aK++LSs   t++ lei++l + g d++ +ltRakfe+L++dl+++++ pve++l+dak++k +++evvlvGGstR+Pk+q+l++++fg ke++k++npDeavA+Ga+vqaa+l+g+   +   dll+ D tpLslg+et+ggvmt li+r t +p+kksqvfst+adnq+ v i+v++ger+++kdn++lg+f+l+gip +prG+pqieVtfdid nGil+vsa +ks+gk ++i+i+++++ lse e+e m  +ae++++ed+++k ++eakn le+++y l+++++++       k+ +++k   ++k++e+i+++++++   +kee+eak++ele v++++ +++
  MMETSP1325-20131115|4831_1   4   617
                 9********************************************************************************************************************************************************************************************99*************************************************************************************..8***********9.*********************************************************************************************955455679**********************************************************************************************************************9*********************************************997767766777777789999************7.7789***************999876 PP

>> PF06723.8  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.2   0.0    0.0026        12       3      57 ..       3      78 ..       1      87 [. 0.62
   2 !   49.7   0.0   3.7e-17   1.7e-13      92     317 ..     136     378 ..     112     386 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0026
                EE--B----EEEE..------.--EEE......ES-EEEEST..........---EEE---..TTCCG----GTTE CS
   PF06723.8  3 dlgiDLGtantlv..yvkgkg.ivlne......psvvAikkk..........tkkvlavGe..eAkkmlgktpgni 57
                ++giDLGt+   v  + +++  iv n+      ps vA++ +          + +  av +  +Ak+++g+t ++ 
  MMETSP1325-20131115|4831_1  3 SIGIDLGTTYSCVgvWSNDRVeIVANDqgnrttPSYVAFNDTeriigdaaknQAATNAVNTvfDAKRLIGRTFDDP 78
                79*******9887446677652555423444449999998876777776655223333433236888888887665 PP

  == domain 2    score: 49.7 bits;  conditional E-value: 3.7e-17
                 S--EEEE-------HHHHHHHHH--------EEEE--HHHHHH------TTS.......----EEEE-----EEEEEE----.EEEEEE....ES----HHHHHHHHHHHHHHSB--.....--.HHHHHHHHH----S--HHHH.-EEE---BTT------EEE----HHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHH---EEE---------HHHHHHH----.-EE-SSTTTTTT----- CS
   PF06723.8  92 skprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpvee.......psgnmvvdiGggttevavislgg.ivtsks....vrvaGdeldeaiikyirkkynlli.....Ge.rtaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLektppeLaadivdrgivltGGgallkgldkllseetglp.vkvaedpltcvakGtgk 317
                   ++ vi+vP   ++ +r+A k+a   aG +   +i+ep aAAi  gl+ ++        +  ++ d+Gggt +v+++++ + i + k+     +++G+++d+ +++y  ++++        G+ r  ++++++   a+ + ++  +  ++   l  gl  +++++ ++ ++  ++ +++ +  v++vL++++  +++  v+  +vl+GG++ +  l++lls+ +g +    a +p ++va G+  
  MMETSP1325-20131115|4831_1 136 GVANAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKKgsngagaEQNVLIFDCGGGTFDVSLLTIDDgIFEVKAtagdTHLGGEDFDNRLVDYFSQEFKRRTkkdisGNpRALRRLRTACERAKRTLSSGtTAMLEIDALCDGLDFNATLTRAKFEDLCADLFRKCMAPVESVLRDAK--MSKGQVH-EVVLVGGSTRVPKLQQLLSDFFGGKeLCKAINPDEAVAYGATV 378
                 45789*******************************************98762222221345699**************97526544432222689*************99987654111113314456677777777666665534445556789*********************************9875..6666655.48889***************998652667899*****999865 PP

>> PF02782.11  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.7e-06     0.013     144     195 ..     322     382 ..     263     383 .. 0.72

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.7e-06
  PF02782.11 144 d.......sgaplsrlavdGGgsrndllmqllAdilg....vpVerprtaeatalGaAllAav 195
                 +       s+ ++ +++++GG +r + l+qll d +g    +  + + ++ea+a Ga + Aa+
  MMETSP1325-20131115|4831_1 322 SvlrdakmSKGQVHEVVLVGGSTRVPKLQQLLSDFFGgkelC--KAINPDEAVAYGATVQAAI 382
                 145555557888*************************95333..355559*********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       789  (0.0577092); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.11u 0.39s 00:00:01.50 Elapsed: 00:00:00.68
# Mc/sec: 2311.78
//
Query:       MMETSP1325-20131115|4841_1  [L=361]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-20   73.6   1.9    2.2e-20   72.5   1.3    1.5  1  PF00505.14 HMG (high mobility group) box
    1.6e-14   53.9   3.9    3.5e-14   52.8   2.7    1.5  1  PF09011.5  Domain of unknown function (DUF1898)
    2.6e-14   52.9   0.5    5.4e-14   51.8   0.3    1.6  1  PF00808.18 Histone-like transcription factor (CBF/NF-Y) and archaeal histone
    2.4e-06   27.4   0.1    5.9e-06   26.1   0.1    1.6  1  PF00125.19 Core histone H2A/H2B/H3/H4
  ------ inclusion threshold ------
      0.013   15.1   0.0      0.029   14.0   0.0    1.5  1  PF02269.11 Transcription initiation factor IID, 18kD subunit


Domain annotation for each model (and alignments):
>> PF00505.14  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   1.3   7.9e-24   2.2e-20       2      66 ..     126     190 ..     125     191 .. 0.97

  Alignments for each domain:
  == domain 1    score: 72.5 bits;  conditional E-value: 7.9e-24
                 --S--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHTTTTS-HCCHHHHHHHHHHHHHHHHHHHG CS
  PF00505.14   2 kRplsaFflfskeqraklkaenPdlkvaeiskklgekWkelseeeKkpYeekaekekeeyekekp 66 
                 k++lsa+++f++++r+++k+e P+l+  e +k+lg+kW +lseeeKkpYe+ a+++ke+y++e++
  MMETSP1325-20131115|4841_1 126 KKNLSAYMIFCNANRERVKEEQPGLTMGEQAKALGAKWANLSEEEKKPYEATAAEDKERYQREVA 190
                 99************************************************************986 PP

>> PF09011.5  Domain of unknown function (DUF1898)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   2.7   1.3e-17   3.5e-14       2      69 ..     123     188 ..     122     189 .. 0.96

  Alignments for each domain:
  == domain 1    score: 52.8 bits;  conditional E-value: 1.3e-17
   PF09011.5   2 kkpkrkrnAYflFvqtmrpelkregpqvpvglaevsklcsekWkalseeeKekYeekAkedkkrydre 69 
                 kk k++ +AY++F    r+  k+e p  +  ++e  k++++kW++lseeeK++Ye  A+edk+ry+re
  MMETSP1325-20131115|4841_1 123 KKLKKNLSAYMIFCNANRERVKEEQPGLT--MGEQAKALGAKWANLSEEEKKPYEATAAEDKERYQRE 188
                 5777789*********************7..************************************9 PP

>> PF00808.18  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.3     2e-17   5.4e-14       3      65 .]     217     279 ..     215     279 .. 0.97

  Alignments for each domain:
  == domain 1    score: 51.8 bits;  conditional E-value: 2e-17
                 --HHHHHHHHHHHTT--.B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH CS
  PF00808.18   3 LPiarvkkImksdpdarkiskdAkeliaecveefieelaseAaeickkekrKTikaediklav 65 
                 +P++rvk+  k dp++++++k+A  ++a+++e+f+ ++a+++++i   ++r+T+k+edi+ +v
  MMETSP1325-20131115|4841_1 217 IPLSRVKRTCKLDPEVKNMTKEATAMVAKATEHFLAHMAEQSYKISALSGRRTVKPEDIRDCV 279
                 8**********************************************************9886 PP

>> PF00125.19  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1   2.2e-09   5.9e-06       8      69 ..     216     276 ..     212     279 .. 0.94

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 2.2e-09
  PF00125.19   8 klpvsRvvrelkegfyaelrisaealvalqealedlleeiledAgllaehakrktitprdiq 69 
                  +p sRv r  k + + +  +++ea  ++++a+e +l++++e +++++  ++r+t++p+di 
  MMETSP1325-20131115|4841_1 216 VIPLSRVKRTCKLDPEVK-NMTKEATAMVAKATEHFLAHMAEQSYKISALSGRRTVKPEDIR 276
                 6899*********98887.*****************************************95 PP

>> PF02269.11  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.1e-05     0.029      16      60 ..     231     275 ..     229     281 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.1e-05
  PF02269.11  16 dvkePlqetvqlledlvrgyliellqqaakvaklrgsrkitlEDl 60 
                 +vk+  +e++ ++ +  +++l  + +q+ k++ l+g+r +++ED+
  MMETSP1325-20131115|4841_1 231 EVKNMTKEATAMVAKATEHFLAHMAEQSYKISALSGRRTVKPEDI 275
                 57788899999*********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       685  (0.0501024); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.39s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 1663.62
//
Query:       MMETSP1325-20131115|4847_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 723.80
//
Query:       MMETSP1325-20131115|4848_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 868.01
//
Query:       MMETSP1325-20131115|4849_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 352.67
//
Query:       MMETSP1325-20131115|4850_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.3    9.5   4.9        1.6    9.3   3.4    1.1  1  PF02957.10 TT viral ORF2


Domain annotation for each model (and alignments):
>> PF02957.10  TT viral ORF2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.4   0.00011       1.6      65     110 ..      33      75 ..       7      79 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00011
  PF02957.10  65 lpaakeekkklakwlettgedaetgpseegdgttgdaededldegd 110
                 l  +  + + ++k + +++ d+++  +++gdg+ ++a+++  ++gd
  MMETSP1325-20131115|4850_1  33 LVHRSSTTEPEQKGDHDGDGDGDSKADGDGDGD-SKADGD--GDGD 75 
                 345556667778888888999998444444444.555544..4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 330.53
//
Query:       MMETSP1325-20131115|4851_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-22   78.6   0.1    2.8e-22   78.3   0.0    1.2  1  PF08783.6 DWNN domain


Domain annotation for each model (and alignments):
>> PF08783.6  DWNN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.0   2.1e-26   2.8e-22       1      74 []      13      87 ..      13      87 .. 0.98

  Alignments for each domain:
  == domain 1    score: 78.3 bits;  conditional E-value: 2.1e-26
   PF08783.6  1 vyYkFksekd..tsrvefdgtgisvsdLKreIiekeklgkgtdfdLklynaqtkeeyeddnalIprsssVivrRip 74
                v+Y+Fks+kd   s ++f g  i++s+LKr I+e+++   g d dL++ n+qt++ y+ddn+ Ip++++V+v+Rip
  MMETSP1325-20131115|4851_1 13 VHYRFKSQKDegFSPIPFSGMVIRLSELKRAIAERKNS-TGLDYDLQVENSQTGQVYTDDNESIPKNTHVVVKRIP 87
                8*********999*******************999998.9***********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 714.11
//
Query:       MMETSP1325-20131115|4853_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0051   16.4   0.0     0.0082   15.8   0.0    1.4  1  PF12525.3 Protein of unknown function (DUF3726)
  ------ inclusion threshold ------
      0.096   11.6   0.0       0.12   11.3   0.0    1.0  1  PF07058.6 Myosin II heavy chain-like


Domain annotation for each model (and alignments):
>> PF12525.3  Protein of unknown function (DUF3726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.2e-06    0.0082       5      27 ..      35      57 ..      34      74 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.2e-06
   PF12525.3  5 NEiealvkKAfrGaglewGeAee 27
                 Ei+alvkK+ +Ga+ + ++ e+
  MMETSP1325-20131115|4853_1 35 QEIIALVKKCIEGARSSSALSED 57
                6*****************99998 PP

>> PF07058.6  Myosin II heavy chain-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.8e-05      0.12     289     335 ..      26      73 ..      21      76 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.8e-05
   PF07058.6 289 Gvlydl.lqkevialrkaaeekdqslkdkdeaiemlakkvetltkale 335
                 Gvl d  l +e+ial k + e  +s  +  e+ e ++  +etltk ++
  MMETSP1325-20131115|4853_1  26 GVLLDVdLLQEIIALVKKCIEGARSSSALSEDGEHVLGEIETLTKHVD 73 
                 7777644667***********************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 412.17
//
Query:       MMETSP1325-20131115|4854_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   15.1   0.5      0.021   14.7   0.4    1.1  1  PF09849.4 Uncharacterized protein conserved in bacteria (DUF2076)


Domain annotation for each model (and alignments):
>> PF09849.4  Uncharacterized protein conserved in bacteria (DUF2076)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.4   1.6e-06     0.021     148     229 ..      85     162 ..      85     180 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.6e-06
   PF09849.4 148 VaGGmlLanglenlfgghsqpeeiveaikesspwggagdasasalaedagennfgdddsdaaglgdqgsngddddagfdDsg 229
                 Va G +L+++l++   g+s +++i  a+k+    + a+ ++a+al++d + +  g +++++  +gd g +   ++a++d ++
  MMETSP1325-20131115|4854_1  85 VASGFVLVDMLSGAVTGNSVANSITRAMKQ----SVAEAQEAEALSTDGVAETGGRNQERRPVAGDAGTEPGASNARVDTES 162
                 89*****************99999999998....555556666666665555555555555444777777665555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1035.02
//
Query:       MMETSP1325-20131115|4856_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   13.9   0.1       0.24   11.1   0.0    2.0  2  PF12945.2 Flagellar protein YcgR
      0.068   12.6   0.1        7.1    6.1   0.0    2.3  2  PF08972.6 Domain of unknown function (DUF1902)


Domain annotation for each model (and alignments):
>> PF12945.2  Flagellar protein YcgR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.6e-05      0.24      52      77 ..       1      26 [.       1      34 [. 0.88
   2 ?    0.5   0.0     0.075   5.1e+02      51      65 ..      43      57 ..      36      61 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3.6e-05
   PF12945.2 52 tevivrfvsedgvyaFkskvlsrisd 77
                ++v +rfv+e +v+aF++  lsr ++
  MMETSP1325-20131115|4856_1  1 EKVQIRFVDEATVWAFETDFLSRARQ 26
                5899*****************99765 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.075
   PF12945.2 51 gtevivrfvsedgvy 65
                 ++v +rfv+e +v+
  MMETSP1325-20131115|4856_1 43 SEKVQIRFVDEATVW 57
                688999999998765 PP

>> PF08972.6  Domain of unknown function (DUF1902)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.001       7.1       2      19 ..       2      19 ..       2      33 .. 0.87
   2 ?    4.5   0.0    0.0032        22       2      14 ..      45      57 ..      44      65 .. 0.90

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.001
                EEEEEE------EEEE-S CS
   PF08972.6  2 kiqavwDeEAgVWvAesd 19
                k+q+ + +EA VW  e d
  MMETSP1325-20131115|4856_1  2 KVQIRFVDEATVWAFETD 19
                6999999******86665 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0032
                EEEEEE------E CS
   PF08972.6  2 kiqavwDeEAgVW 14
                k+q+ + +EA VW
  MMETSP1325-20131115|4856_1 45 KVQIRFVDEATVW 57
                69999******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 448.68
//
Query:       MMETSP1325-20131115|4859_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 552.20
//
Query:       MMETSP1325-20131115|4860_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.22   10.8   2.1        1.4    8.2   0.4    2.0  2  PF13363.1 Beta-galactosidase, domain 3


Domain annotation for each model (and alignments):
>> PF13363.1  Beta-galactosidase, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.4    0.0001       1.4      31      59 ..       3      30 ..       1      36 [. 0.81
   2 ?    4.9   0.1    0.0011        15      32      59 ..      27      53 ..      25      59 .] 0.77

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0001
                E---EEEEEEEBSS---EEEE-------E CS
   PF13363.1 31 lsgstLsLtGDfnatttleviappksvkt 59
                 +g+tL++tG +  +ttl v ++  + +t
  MMETSP1325-20131115|4860_1  3 ATGTTLKMTGAITGDTTLSVGGA-ATGTT 30
                579*****************999.44455 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0011
                ---EEEEEEEBSS---EEEE-------E CS
   PF13363.1 32 sgstLsLtGDfnatttleviappksvkt 59
                +g+tL++tG +   +tl v ++  + +t
  MMETSP1325-20131115|4860_1 27 TGTTLKMTGAITGGSTLSVGGA-ATGTT 53
                7999999999999999999888.44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.61
# Mc/sec: 231.78
//
Query:       MMETSP1325-20131115|4866_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.66
# Mc/sec: 515.58
//
Query:       MMETSP1325-20131115|4867_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 417.14
//
Query:       MMETSP1325-20131115|4868_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.62
# Mc/sec: 224.18
//
Query:       MMETSP1325-20131115|4870_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.056   12.8   0.4      0.092   12.1   0.3    1.4  1  PF08201.6  BssC/TutF protein
       0.35   10.4   2.5       0.75    9.3   1.7    1.6  1  PF04438.11 HIT zinc finger


Domain annotation for each model (and alignments):
>> PF08201.6  BssC/TutF protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   1.3e-05     0.092       3      27 ..       2      26 ..       1      34 [. 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.3e-05
   PF08201.6  3 tCkdCsfffavPedadDyeagkgDC 27
                tC++C++ f + e+   ye+    C
  MMETSP1325-20131115|4870_1  2 TCRNCENTFFIRENMLQYERQGPYC 26
                9******************864444 PP

>> PF04438.11  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.7   0.00011      0.75      15      28 ..       2      30 ..       2      32 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00011
  PF04438.11 15 kCpkCntr...............yCSLrC 28
                +C++C+                 yCS++C
  MMETSP1325-20131115|4870_1  2 TCRNCENTffirenmlqyerqgpYCSVDC 30
                79999999999999999999999****** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 407.80
//
Query:       MMETSP1325-20131115|4871_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 727.78
//
Query:       MMETSP1325-20131115|4869_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0066   16.3   1.8        1.8    9.0   0.1    3.4  3  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.022   14.5   1.3       0.88    9.7   0.2    2.7  2  PF00560.28 Leucine Rich Repeat
      0.052   13.5   1.2        4.2    7.6   0.1    2.9  2  PF13516.1  Leucine Rich repeat
      0.057   12.9   1.0       0.22   11.0   0.7    2.0  1  PF12799.2  Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.1   0.00053       1.8       3      14 ..       7      19 ..       6      26 .. 0.71
   2 ?    3.3   0.0      0.04   1.4e+02       3      14 ..      29      41 ..      27      46 .. 0.77
   3 ?    2.4   0.0     0.077   2.6e+02       4      16 ..      43      56 ..      38      59 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00053
   PF13504.1  3 LkeLdLsgnr.Lt 14
                L++LdLs++r L+
  MMETSP1325-20131115|4869_1  7 LQTLDLSYCRsLN 19
                89*******8754 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.04
   PF13504.1  3 LkeLdLsgnr.Lt 14
                 ++L+L +++ L+
  MMETSP1325-20131115|4869_1 29 ITVLNLEWCGqLE 41
                589******8774 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.077
   PF13504.1  4 keLdLsgnr.LtsL 16
                ++L L++++ L  L
  MMETSP1325-20131115|4869_1 43 TTLALASCPeLVKL 56
                799*****988765 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.2   0.00026      0.88       2      15 ..       7      22 ..       6      30 .. 0.78
   2 ?    3.3   0.0     0.032   1.1e+02       2      13 ..      29      41 ..      28      60 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00026
                ESEEEETSS.BCB.CH CS
  PF00560.28  2 LeeLdLsgN.nlt.sl 15
                L++LdLs++ +l  ++
  MMETSP1325-20131115|4869_1  7 LQTLDLSYCrSLNgNI 22
                9*******98888664 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.032
                ESEEEETSS.BCB CS
  PF00560.28  2 LeeLdLsgN.nlt 13
                +++L+L  + +l+
  MMETSP1325-20131115|4869_1 29 ITVLNLEWCgQLE 41
                789******9997 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1    0.0012       4.2       4      13 ..       7      16 ..       5      25 .. 0.83
   2 ?    3.9   0.0     0.019        66       2      13 ..      27      38 ..      26      53 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0012
   PF13516.1  4 LtsLdLsnNq 13
                L++LdLs++ 
  MMETSP1325-20131115|4869_1  7 LQTLDLSYCR 16
                9*******96 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.019
   PF13516.1  2 knLtsLdLsnNq 13
                +++t+L+L  ++
  MMETSP1325-20131115|4869_1 27 QSITVLNLEWCG 38
                689******996 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.7   6.5e-05      0.22       3      31 ..       7      34 ..       7      57 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.5e-05
   PF12799.2  3 LevLdLsnN.....nIkdlppelanLpnLktLnL 31
                L++LdLs++     nIkdlp +       ++LnL
  MMETSP1325-20131115|4869_1  7 LQTLDLSYCrslngNIKDLPQS------ITVLNL 34
                9********6666667777764......444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.61
# Mc/sec: 569.63
//
Query:       MMETSP1325-20131115|4857_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:01.09
# Mc/sec: 312.19
//
Query:       MMETSP1325-20131115|4874_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00073   18.6   0.0    0.00077   18.5   0.0    1.0  1  PF01593.19 Flavin containing amine oxidoreductase


Domain annotation for each model (and alignments):
>> PF01593.19  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   5.6e-08   0.00077     342     449 ..       2     101 ..       1     102 [. 0.89

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 5.6e-08
                 EEEECCCHHHTTS-HHHHHHHHHHHHHHHHHH.SSB--SEEEEEETTTSTTT---ECCHBHHHHHHHHHHHHS-BBSSEEE--GTT-TTTTTS---TTT---HHHHHH CS
  PF01593.19 342 yvlgdaareleslsdeellervledLrkllgnedvpdpkdtvvtrWstdplargsysyvsvgssgddrpalaepvgprlffAGehtsrgypgtveGAvlSGlraAari 449
                 y++g  + +l++l++ee++  v +  r++l ++d+p pk      W t +++++  ++    s+    +a ae v p+l ++G++ s++    ++++v  G++ A  +
  MMETSP1325-20131115|4874_1   2 YIGGSRDVGLADLPEEEIISEVDKGCRQVLLKSDAPPPKVLGLKIWPT-AIPQYELGHQELISD--LEKAEAE-V-PGLWVCGNYRSGV---AFPDCVTFGYEHAKVV 101
                 88999999*******************************555668999.999999999999999..9999999.4.8**********99...8999999888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|4878_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.3   0.3      0.013   15.2   0.2    1.1  1  PF01613.13 Flavin reductase like domain


Domain annotation for each model (and alignments):
>> PF01613.13  Flavin reductase like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.2   9.5e-07     0.013      13      65 ..      15      75 ..       6      79 .] 0.84

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 9.5e-07
                EE----EE-........--B---EEEETTTTEEEE-EESSSHHHHHHHH---EEEEE-BTT CS
  PF01613.13 13 tvppgsplg........atlssftslsldPplvafslrlpsstasalkeagsftinllsed 65
                + ++ +++g        + l+sf+sls+ P   + s++ ++  +  l+ ++s+ i +l++ 
  MMETSP1325-20131115|4878_1 15 ASSSANRNGllvlevcdVALASFASLSHRPDSPMRSIGSSKAAVVVLATTSSCSIRILTRR 75
                4556666666666777799***************************************983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.44s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 364.06
//
Query:       MMETSP1325-20131115|4880_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 505.90
//
Query:       MMETSP1325-20131115|4881_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.45s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 361.90
//
Query:       MMETSP1325-20131115|4879_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-13   50.4   0.0    1.7e-13   50.2   0.0    1.0  1  PF00923.14 Transaldolase


Domain annotation for each model (and alignments):
>> PF00923.14  Transaldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   1.3e-17   1.7e-13     209     287 .]      28     118 ..      18     118 .. 0.84

  Alignments for each domain:
  == domain 1    score: 50.2 bits;  conditional E-value: 1.3e-17
                 SHHHHHHH----EEEE-HHHHHHHT--HHH...........................................H---HHHHHHHHHHHH-- CS
  PF00923.14 209 nveeveelagcdtvTippdllealakhgkt.......seklek...eeiek..lleklfrlginedavaeelldegikkFakdlekllasl 287
                 +++e+ +lag d++Tipp +l+ la++++        +e++++    ei+   + e++frl +n+d +++e+l+eg+++F +d+ekl+a++
  MMETSP1325-20131115|4879_1  28 ETDEIVALAGVDRMTIPPGILKMLADSTEPlprileaEEAAAAydgPEIDGgdIKETTFRLAMNQDGCTNEKLAEGLRAFIADTEKLEAAI 118
                 689***********************9999887775322222233444444999*********************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 649.68
//
Query:       MMETSP1325-20131115|4882_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 464.89
//
Query:       MMETSP1325-20131115|4883_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 328.39
//
Query:       MMETSP1325-20131115|4884_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       400  (0.0292569); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 746.56
//
Query:       MMETSP1325-20131115|4877_1  [L=613]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   5.9e-153  510.6   0.0   7.9e-126  420.8   0.0    2.0  2  PF10266.4 Hereditary spastic paraplegia protein strumpellin
  ------ inclusion threshold ------
        0.2   10.6   1.0       0.45    9.5   0.1    2.0  2  PF06816.8 NOTCH protein


Domain annotation for each model (and alignments):
>> PF10266.4  Hereditary spastic paraplegia protein strumpellin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.0   0.0   3.6e-29   2.4e-25     514     607 ..       2      95 ..       1      99 [. 0.96
   2 !  420.8   0.0  1.2e-129  7.9e-126     654    1081 .]     125     553 ..     112     553 .. 0.98

  Alignments for each domain:
  == domain 1    score: 88.0 bits;  conditional E-value: 3.6e-29
   PF10266.4 514 nikekvlielatvadfsYawellssyvellQekikkqpklvvklravFlKLasilelpllridqaesedlesvseyYSeelvkfvrkVlqiiPe 607
                 ni ++ l+++++++d+sY +e+l++y++ +  +++++p+  v lra F+KLasil++pl ri+q+ s+d+ sv+e+YS+elv+f+r+ l+  P 
  MMETSP1325-20131115|4877_1   2 NIRHSDLSKMEVISDLSYGFEILNDYTQVMHDRVRSEPNYSVLLRAGFVKLASILDVPLTRINQVDSPDALSVAEFYSSELVDFMRRLLDXDPA 95 
                 8999************************************************************************************987765 PP

  == domain 2    score: 420.8 bits;  conditional E-value: 1.2e-129
   PF10266.4  654 sisvftegilamettlvGvievdpkqLLedGirkeLvkqiakalhaslifdekkkskaseleekLkklaeriegirrsfeyiqDyvnvqGlkiwqeefsRivefnvekEcnaflkkkvyeweseyqsesipiPkfepl....ekesvnfigrLarellriTdpkesvyleslgswydrktlkevlglklfsrieeavgvaglagldrllsfmlakelqelleklkeklelekekrdaleelekelepessvpekslkaYeqlikkikkssaellkvllkiGqiqllrqqiaaelrlkckldsksLeaaletlnkalladlkrhykspdskdlpeee..llaelsklLesvglsdplrkvyvtkkplpelvlllfllvlaklpklqyskkldslvpkkkkdkvdpealvvglltlLrQfhseetslflsylgqvv 1081
                  + s+fteg+lame+t +G+i+vd +q+L+dG+rkeLv+q+++a+h++l+        a+e+e+ ++ l++++eg+rrs+eyiqDyv + Glk+wqee+sRi+++n+e+Ecn++lkkkv e +s+yqs+ ipiP+f++     +  svnf+gr+++ ll +T   ++v+ + + +w+++++ +ev g+k+f+ +++ + v+glagldrll+f ++++l  +l+  k ++   ++    le++ + l pe+svp++s + Y++ +kk++k +a +l ++lkiGq+qllr+q++  l+++c+ld++ L +al+t+n+a+l+d+++hy++pd++++p+e+  ll +l+klL+++g+sdp+ k+y+ ++p+++l+ ll+ +v++ ++kl++++++++lv +k+++ +d  ++vvg+ tlL+Qfh + t+++l+ylgq+v
  MMETSP1325-20131115|4877_1  125 EASNFTEGVLAMEKTALGIIQVDARQVLQDGLRKELVRQVSEAMHSTLTLR-AGVDLATEFERVMSLLGQQMEGFRRSIEYIQDYVDIAGLKMWQEEVSRIINYNIEQECNKYLKKKVLEHNSKYQSKVIPIPRFRSPagplNAGSVNFMGRVMNALLLMTSSDTTVFAPESVAWFNQDG-TEVAGIKTFALLNSGLSVTGLAGLDRLLAFRIVHHLGAFLRFHKDSV---TSYLPLLEQIRDGLFPENSVPRHSSNLYSKSLKKLEKLMAPILSLVLKIGQAQLLRRQMNFVLKFSCRLDANLLYQALTTANTAVLNDVREHYRHPDTAPYPSESnpLLGQLNKLLSASGMSDPFCKIYTVTEPVESLPALLLFFVITYMQKLHFDHQFSTLVRRKQSYPLDGMPFVVGVWTLLKQFHPSYTRQLLAYLGQFV 553 
                  5699**********************************************9.788999*****************************************************************************8766777999*********************************99.9****************************************999999...56789***************************************************************************************************99***********************************************************************************************97 PP

>> PF06816.8  NOTCH protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1      0.58     4e+03      29      42 ..     162     175 ..     159     176 .. 0.85
   2 ?    9.5   0.1   6.6e-05      0.45       6      40 ..     390     424 ..     386     431 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 0.58
   PF06816.8  29 relSavLrttvrik 42 
                 r++S + ++t+ ++
  MMETSP1325-20131115|4877_1 162 RQVSEAMHSTLTLR 175
                 89999****99876 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 6.6e-05
   PF06816.8   6 eGtLvivVlippeelrnnsvqFLrelSavLrttvr 40 
                 +  L++v++i  ++l++++++F  ++S  L++++ 
  MMETSP1325-20131115|4877_1 390 APILSLVLKIGQAQLLRRQMNFVLKFSCRLDANLL 424
                 55699**************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.06u 0.37s 00:00:01.43 Elapsed: 00:00:00.92
# Mc/sec: 1596.70
//
Query:       MMETSP1325-20131115|4886_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|4887_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|4888_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0048   16.6   0.0     0.0069   16.1   0.0    1.3  1  PF00271.26 Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   5.1e-07    0.0069      45      78 .]       1      34 [.       1      34 [. 0.95

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 5.1e-07
                S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26 45 rGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78
                +G++l + +  + fd +++++   Q++ R++R g
  MMETSP1325-20131115|4888_1  1 MGLNLIGGSRLVLFDSDWNPAIDKQAMARVWREG 34
                69999999************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|4889_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-18   66.6   4.1    1.6e-13   50.2   0.3    2.2  2  PF12907.2  Zinc-binding
    0.00016   21.9   1.7    0.00016   21.9   1.2    2.2  2  PF00428.14 60s Acidic ribosomal protein
     0.0034   16.9   0.2          3    7.5   0.1    2.2  2  PF12662.2  Complement Clr-like EGF-like
     0.0045   16.7   2.9        0.3   10.9   0.1    2.3  2  PF13912.1  C2H2-type zinc finger
  ------ inclusion threshold ------
      0.071   13.2   0.3      0.071   13.2   0.2    1.6  2  PF12013.3  Protein of unknown function (DUF3505)
      0.075   12.7   0.5       0.35   10.5   0.0    2.0  2  PF02892.10 BED zinc finger
      0.083   12.8   0.0       0.11   12.4   0.0    1.2  1  PF07422.8  Sexual stage antigen s48/45 domain
       0.77    9.6   4.5       0.21   11.4   1.1    1.6  1  PF04823.7  Herpesvirus UL49 tegument protein
        1.6    9.3   6.6       0.36   11.3   0.9    2.1  2  PF13007.2  Transposase C of IS166 homeodomain
        6.9    6.9   7.0         26    5.1   0.1    3.4  3  PF12874.2  Zinc-finger of C2H2 type


Domain annotation for each model (and alignments):
>> PF12907.2  Zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2   1.5e-06    0.0021       3      20 ..       2      19 ..       1      21 [. 0.85
   2 !   50.2   0.3   1.1e-16   1.6e-13       2      39 ..      53      90 ..      52      91 .. 0.94

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.5e-06
   PF12907.2  3 iCkiCrqtFmcttseklL 20
                +Ck+Crq Fm++ +++  
  MMETSP1325-20131115|4889_1  2 TCKVCRQGFMVNSTRAEV 19
                7***********987765 PP

  == domain 2    score: 50.2 bits;  conditional E-value: 1.1e-16
   PF12907.2  2 iiCkiCrqtFmcttseklLkeHaenKHpktdveeCFPe 39
                i+Ck+Crq Fm++ + ++L+ H ++KH k +++eCF +
  MMETSP1325-20131115|4889_1 53 ITCKVCRQGFMVNSTIVQLQAHLTSKHAKLQPTECFSN 90
                89***************************77*****66 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   2.5     0.039        54      51      65 ..      36      50 ..      11      54 .. 0.56
   2 !   21.9   1.2   1.1e-07   0.00016      35      81 ..      71     125 ..      60     133 .. 0.57

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.039
  PF00428.14 51 aaaaaaaaaaaaaaa 65
                a +aaaa+a+a+a+a
  MMETSP1325-20131115|4889_1 36 AGGAAAAQAKAQADA 50
                333333334443333 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 1.1e-07
  PF00428.14  35 ikeliangsakla.........aaaaaaaaaaaaaaaaaaaeeekkeeeeeEeedd 81 
                 +++ +++ +akl+         + +aa  aa aa+aaa+ ++++kk + e E  dd
  MMETSP1325-20131115|4889_1  71 LQAHLTSKHAKLQptecfsnwaQMVAAEEAAKAAPAAAPVKKKKKKPKQE-ESLDD 125
                 55556666667668888877744445555555555555555555555544.34444 PP

>> PF12662.2  Complement Clr-like EGF-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.1    0.0022         3       3      15 ..       2      13 ..       2      24 .. 0.82
   2 !    7.4   0.0    0.0023       3.1       3      11 ..      54      63 ..      52      73 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0022
   PF12662.2  3 tC.sCppGYqlspd 15
                tC  C++G+   ++
  MMETSP1325-20131115|4889_1  2 TCkVCRQGFM--VN 13
                8967*****9..44 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0023
   PF12662.2  3 tC.sCppGYq 11
                tC  C++G+ 
  MMETSP1325-20131115|4889_1 54 TCkVCRQGFM 63
                8967*****9 PP

>> PF13912.1  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.2    0.0063       8.6       3      12 ..       2      11 ..       1      17 [. 0.85
   2 !   10.9   0.1   0.00022       0.3       3      25 ..      54      79 ..      53      81 .. 0.90

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0063
   PF13912.1  3 tCgrCgktFs 12
                tC++C++ F+
  MMETSP1325-20131115|4889_1  2 TCKVCRQGFM 11
                8******994 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00022
   PF13912.1  3 tCgrCgktF...sslqaLggHKkshC 25
                tC++C++ F   s++  L +H +s +
  MMETSP1325-20131115|4889_1 54 TCKVCRQGFmvnSTIVQLQAHLTSKH 79
                8********************98755 PP

>> PF12013.3  Protein of unknown function (DUF3505)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1         3   4.1e+03      14      25 ..       3      14 ..       2      21 .. 0.71
   2 ?   13.2   0.2   5.2e-05     0.071      12      71 ..      53     117 ..      45     129 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 3
   PF12013.3 14 CrqCkyavlpse 25
                C+ C+ + ++++
  MMETSP1325-20131115|4889_1  3 CKVCRQGFMVNS 14
                888888877755 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 5.2e-05
   PF12013.3  12 iiCrqCkyavlp....sevetHLrkkhhel.kqaatkelaqaieqwddlerdpeavslpsalsep 71 
                 i C+ C+ + ++     +++ HL +kh +l +++  ++ aq+++  +  ++ p+a+ +++++++p
  MMETSP1325-20131115|4889_1  53 ITCKVCRQGFMVnstiVQLQAHLTSKHAKLqPTECFSNWAQMVAAEEAAKAAPAAAPVKKKKKKP 117
                 6799999998886666789********99845666789999996666556666666666666655 PP

>> PF02892.10  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.51     7e+02      18      26 ..       2      10 ..       1      17 [. 0.76
   2 ?   10.5   0.0   0.00026      0.35      14      44 ..      50      79 ..      43      80 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.51
  PF02892.10 18 rCkyCgkil 26
                +Ck C++ +
  MMETSP1325-20131115|4889_1  2 TCKVCRQGF 10
                6****9765 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00026
  PF02892.10 14 kqkarCkyCgkilsrgkngTsnLkrHLrkkC 44
                   ++Ck C++ +  + + +  L  HL++k+
  MMETSP1325-20131115|4889_1 50 AAGITCKVCRQGFMVN-STIVQLQAHLTSKH 79
                56789**********7.***********999 PP

>> PF07422.8  Sexual stage antigen s48/45 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.1e-05      0.11      37      90 ..      47     119 ..      38     134 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.1e-05
   PF07422.8  37 endivGfkCpkk.....................fklepenCFesvyvdkenkkkkledllkgakifknkkdkkkn 90 
                 + d  G++C+                        kl+p++CF++    +    ++  +  + a ++k+kk+k k+
  MMETSP1325-20131115|4889_1  47 QADAAGITCKVCrqgfmvnstivqlqahltskhAKLQPTECFSNWA--QMVAAEEAAKAAPAAAPVKKKKKKPKQ 119
                 567788888888888999999999999999999************6..566666666666666666433333333 PP

>> PF04823.7  Herpesvirus UL49 tegument protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.1   0.00016      0.21      42      78 ..      89     129 ..      57     132 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00016
   PF04823.7  42 ceAvarvAaaharlaAaal....WdknkPrtneeLekllea 78 
                  +  ++vAa++a +aA a+     +k+kP+++e+L++ll+a
  MMETSP1325-20131115|4889_1  89 SNWAQMVAAEEAAKAAPAAapvkKKKKKPKQEESLDDLLNA 129
                 4545556666555554443111256789**********986 PP

>> PF13007.2  Transposase C of IS166 homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.2       0.5   6.8e+02      38      49 ..      38      49 ..      17      59 .. 0.60
   2 ?   11.3   0.9   0.00026      0.36      39      73 ..      95     126 ..      71     128 .. 0.58

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.5
   PF13007.2 38 aaaaeaeaeaee 49
                 aaa+++ ++++
  MMETSP1325-20131115|4889_1 38 GAAAAQAKAQAD 49
                233333333222 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00026
   PF13007.2  39 aaaeaeaeaeeaaaetaarrrkrrkpgRkpLpahL 73 
                  aae+ a+ +++aa+++  ++k++kp++++  ++L
  MMETSP1325-20131115|4889_1  95 VAAEE-AAKAAPAAAPV--KKKKKKPKQEESLDDL 126
                 33333.22332233333..5677777776655555 PP

>> PF12874.2  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.2      0.17   2.4e+02       2       7 ..       2       7 ..       1      11 [. 0.79
   2 ?    2.2   0.1      0.15     2e+02       2       7 ..      54      59 ..      53      63 .. 0.79
   3 ?    5.1   0.1     0.019        26      14      23 ..      69      78 ..      66      79 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.17
               EETTTT CS
   PF12874.2 2 yCelCn 7
               +C++C 
  MMETSP1325-20131115|4889_1 2 TCKVCR 7
               6****7 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.15
                EETTTT CS
   PF12874.2  2 yCelCn 7 
                +C++C 
  MMETSP1325-20131115|4889_1 54 TCKVCR 59
                7****7 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.019
                HHHHHHH--- CS
   PF12874.2 14 sqlksHlqGK 23
                 ql++Hl +K
  MMETSP1325-20131115|4889_1 69 VQLQAHLTSK 78
                69*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       712  (0.0520772); expected 273.4 (0.02)
Passed bias filter:                      454  (0.0332066); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 584.37
//
Query:       MMETSP1325-20131115|4891_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0017   17.4   1.1     0.0018   17.3   0.7    1.0  1  PF01061.19 ABC-2 type transporter
  ------ inclusion threshold ------
        0.1   12.1   2.5       0.12   11.9   1.8    1.2  1  PF13190.1  PDGLE domain
       0.74    8.9   3.7       0.85    8.7   2.6    1.0  1  PF00924.13 Mechanosensitive ion channel


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.7   3.9e-07    0.0018     142     185 ..       4      47 ..       1      56 [. 0.89

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 3.9e-07
  PF01061.19 142 fasslgllisalapsfedasqlasllllpllllsGvfipldsmp 185
                 ++  +++ i+al  s  + +++++l++++++l++G+++ +++++
  MMETSP1325-20131115|4891_1   4 TFALWSMGIGALRLSTVVSNVVGGLVTMVFMLTGGFMVDREALK 47 
                 678899999999999*************************9983 PP

>> PF13190.1  PDGLE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.8   2.7e-05      0.12      64      87 ..      16      39 ..       4      40 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.7e-05
   PF13190.1 64 nagtsvsgivGvlltlalagligf 87
                +++t+vs +vG+l+t+++++  gf
  MMETSP1325-20131115|4891_1 16 RLSTVVSNVVGGLVTMVFMLTGGF 39
                689**************9998887 PP

>> PF00924.13  Mechanosensitive ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.6   0.00019      0.85      23      58 ..       2      37 ..       1      41 [. 0.91

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00019
  PF00924.13 23 nvsallavlGalglalglalqdlisnlvaGiillfe 58
                nv+  l+++G+++l l+ ++ +++ +lv+ +++l+ 
  MMETSP1325-20131115|4891_1  2 NVTFALWSMGIGALRLSTVVSNVVGGLVTMVFMLTG 37
                688899**************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 289.56
//
Query:       MMETSP1325-20131115|4893_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 344.74
//
Query:       MMETSP1325-20131115|4894_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 244.07
//
Query:       MMETSP1325-20131115|4896_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 683.22
//
Query:       MMETSP1325-20131115|4898_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.70
# Mc/sec: 246.48
//
Query:       MMETSP1325-20131115|4900_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.82
# Mc/sec: 225.02
//
Query:       MMETSP1325-20131115|4901_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        86  (0.00629023); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.55
# Mc/sec: 248.35
//
Query:       MMETSP1325-20131115|4876_1  [L=534]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   21.9   8.5    0.00014   21.5   3.7    2.4  2  PF01485.16 IBR domain
  ------ inclusion threshold ------
        0.5   10.7   0.0        0.5   10.7   0.0    3.1  3  PF00096.21 Zinc finger, C2H2 type
        5.1    6.8  13.5        2.3    7.9   0.2    3.2  3  PF13639.1  Ring finger domain


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.12   5.6e+02      19      36 ..      77      92 ..      56      99 .. 0.57
   2 !   21.5   3.7   3.1e-08   0.00014      14      59 ..     276     316 ..     261     321 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.12
  PF01485.16 19 kwCprpdCeaiiekekga 36
                + Cp   C++++   ++ 
  MMETSP1325-20131115|4876_1 77 TECPV--CGEAYSRPHDL 92
                46655..66666665555 PP

  == domain 2    score: 21.5 bits;  conditional E-value: 3.1e-08
  PF01485.16  14 sekelkwCprpdCeaiiekekgakkssvtCskCgfefCflCkkewH 59 
                  +k +k Cpr  C++    + g +   +tC  Cg++fC++C+ +  
  MMETSP1325-20131115|4876_1 276 MSKVAKPCPR--CHRLGSRSAGGDS--MTCL-CGQAFCYRCGLDRF 316
                 4555679*99..************9..****.*********97655 PP

>> PF00096.21  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00011       0.5       2      17 ..      78      93 ..      77      94 .. 0.92
   2 ?   -0.1   0.1      0.31   1.4e+03       3      13 ..     283     293 ..     282     295 .. 0.81
   3 ?   -4.0   1.3         3   1.4e+04       5      12 ..     302     309 ..     301     313 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00011
                E------EESSHHHHH CS
  PF00096.21  2 qCpdCgksFsrksnLl 17
                +Cp Cg  +sr+++L+
  MMETSP1325-20131115|4876_1 78 ECPVCGEAYSRPHDLK 93
                6*************97 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.31
                 ------EESSH CS
  PF00096.21   3 CpdCgksFsrk 13 
                 Cp C++  sr+
  MMETSP1325-20131115|4876_1 283 CPRCHRLGSRS 293
                 *****987776 PP

  == domain 3    score: -4.0 bits;  conditional E-value: 3
                 ----EESS CS
  PF00096.21   5 dCgksFsr 12 
                 +Cg+ F  
  MMETSP1325-20131115|4876_1 302 LCGQAFCY 309
                 58887764 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.2   0.00051       2.3       2      22 ..      78      98 ..      77     103 .. 0.91
   2 ?    0.7   5.3     0.089     4e+02       3      31 ..     283     314 ..     281     321 .. 0.77
   3 ?   -2.1   0.0      0.65     3e+03       3      14 ..     318     329 ..     316     331 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00051
   PF13639.1  2 eCaiCldelsegeevvrlpCg 22
                eC++C + +s+ +++ + pC 
  MMETSP1325-20131115|4876_1 78 ECPVCGEAYSRPHDLKTAPCA 98
                8********999***9*9996 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.089
   PF13639.1   3 CaiCldelse..geevvrlpCgHvfHeeC.ld 31 
                 C+ C +  s+  g + +++ Cg  f+++C ld
  MMETSP1325-20131115|4876_1 283 CPRCHRLGSRsaGGDSMTCLCGQAFCYRCgLD 314
                 77787777667777788899*********444 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.65
   PF13639.1   3 CaiCldelsege 14 
                  ++C d ++e++
  MMETSP1325-20131115|4876_1 318 GCVCEDRFQEDD 329
                 589***999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       558  (0.0408133); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.35s 00:00:01.20 Elapsed: 00:00:00.57
# Mc/sec: 2206.30
//
Query:       MMETSP1325-20131115|4902_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|4895_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.4e-35  118.8   0.1    1.2e-34  118.5   0.0    1.0  1  PF12707.2 Protein of unknown function (DUF3804)
      2e-05   24.4   0.1    3.6e-05   23.6   0.0    1.4  1  PF13474.1 SnoaL-like domain
     0.0043   16.8   0.1     0.0077   16.0   0.0    1.5  2  PF08332.5 Calcium/calmodulin dependent protein kinase II Association


Domain annotation for each model (and alignments):
>> PF12707.2  Protein of unknown function (DUF3804)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.5   0.0   2.6e-38   1.2e-34       2     122 ..      15     134 ..      14     138 .. 0.97

  Alignments for each domain:
  == domain 1    score: 118.5 bits;  conditional E-value: 2.6e-38
   PF12707.2   2 dkeeiesllegfanreknksfliknvtedflairpsGnpidakglegmydskdlvlesselvkihrlellgedialavftlkekfsykGeknddlstvtlifkkidetwkiswmqrssGtt 122
                 ++++i +++e++ n+ +   fl +n+t+df +irpsGnp +   ++ m++ +dlv+    l+ki +le++g+ +a+a +t    f ykG+ n+d  + t+i++++d++wk+ wm rs+G+ 
  MMETSP1325-20131115|4895_1  15 NRQTITTMIEEYGNSMQFVEFLENNTTSDFQFIRPSGNPANLTLFKAMFSGADLVVTDHSLIKIQKLEVVGD-MAFACMTESAVFEYKGTPNNDRYSTTAILRRVDGVWKFCWMHRSTGDQ 134
                 6899*****************************************************************776.**********************************************86 PP

>> PF13474.1  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   7.9e-09   3.6e-05      67     117 ..      80     130 ..      50     132 .. 0.85

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 7.9e-09
   PF13474.1  67 rvtvsgdvawvteeldlqakadgseaegqvrgtgvlrktdggWkivhyhlS 117
                 +++v gd+a+++++++  ++ +g++++ ++ +t +lr+ dg Wk++ +h S
  MMETSP1325-20131115|4895_1  80 KLEVVGDMAFACMTESAVFEYKGTPNNDRYSTTAILRRVDGVWKFCWMHRS 130
                 335779***************************************999977 PP

>> PF08332.5  Calcium/calmodulin dependent protein kinase II Association
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   5.2e+03      44      52 ..      27      35 ..      16      46 .. 0.56
   2 !   16.0   0.0   1.7e-06    0.0077      69     126 ..      76     131 ..      56     133 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.1
   PF08332.5 44 veglefhrf 52
                 ++++f +f
  MMETSP1325-20131115|4895_1 27 GNSMQFVEF 35
                345555555 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 1.7e-06
   PF08332.5  69 ilnkkvqllgddaAviayvrllqlldkeGkkhtvqseetrvwekrdgkWkivhvHrSa 126
                 i  +k++++gd    +a +    + + +G++++     t + ++ dg Wk   +HrS+
  MMETSP1325-20131115|4895_1  76 IKIQKLEVVGD--MAFACMTESAVFEYKGTPNNDRYSTTAILRRVDGVWKFCWMHRST 131
                 66688999999..44666677789999******************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.32s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 743.87
//
Query:       MMETSP1325-20131115|4904_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.50
# Mc/sec: 162.95
//
Query:       MMETSP1325-20131115|4907_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.55
# Mc/sec: 261.42
//
Query:       MMETSP1325-20131115|4909_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        86  (0.00629023); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|4908_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-14   53.3   0.8    1.6e-07   30.7   0.0    2.2  2  PF13833.1  EF-hand domain pair
    3.2e-13   47.8   7.4    6.1e-06   25.0   0.1    3.5  4  PF00036.27 EF hand
    6.1e-12   44.1   6.2    5.7e-06   25.3   0.1    3.3  3  PF13202.1  EF hand
    1.8e-11   43.8   4.4    1.4e-05   25.0   0.1    2.5  3  PF13499.1  EF-hand domain pair
    5.3e-10   38.2   2.5     0.0025   17.4   0.1    3.4  3  PF13405.1  EF-hand domain
     0.0016   18.0   1.2       0.33   10.6   0.1    2.2  2  PF12763.2  Cytoskeletal-regulatory complex EF hand
  ------ inclusion threshold ------
       0.27   10.7   3.8       0.31   10.5   2.6    1.1  1  PF04546.8  Sigma-70, non-essential region


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   6.3e-08   0.00012      30      52 ..       2      24 ..       1      26 [. 0.91
   2 !   30.7   0.0     8e-11   1.6e-07       5      54 .]      89     137 ..      85     137 .. 0.92

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 6.3e-08
   PF13833.1 30 lfrefDtdgdGkisfeEFcvlle 52
                +++ +D +gdG i+feEF ++++
  MMETSP1325-20131115|4908_1  2 IINTLDENGDGSIDFEEFFAYVT 24
                7999***************9986 PP

  == domain 2    score: 30.7 bits;  conditional E-value: 8e-11
   PF13833.1   5 ItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvllerl 54 
                 I+ +eL+++l l+g++ l ++ev ++++ +D +gdG ++++EF++ll+rl
  MMETSP1325-20131115|4908_1  89 ISIKELQDMLELTGQN-LPADEVLEIVSDIDVNGDGHLDKDEFYTLLRRL 137
                 7778****99777999.******************************985 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.2   1.2e-08   2.4e-05       5      27 ..       2      24 ..       1      26 [. 0.89
   2 ?   -3.0   0.0       2.9   5.6e+03       5      10 ..      41      46 ..      39      47 .. 0.78
   3 ?    2.7   0.0     0.044        85      17      27 ..      89      99 ..      88     101 .. 0.88
   4 !   25.0   0.1   3.1e-09   6.1e-06       1      29 []     109     137 ..     109     137 .. 0.92

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 1.2e-08
                HHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  5 aFkefDkDgdGkIsfeEfkealk 27
                +++ +D +gdG I+feEf ++++
  MMETSP1325-20131115|4908_1  2 IINTLDENGDGSIDFEEFFAYVT 24
                68899*************99876 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 2.9
                HHHHHC CS
  PF00036.27  5 aFkefD 10
                +F+++D
  MMETSP1325-20131115|4908_1 41 IFSLVD 46
                899999 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.044
                BEHHHHHHHHH CS
  PF00036.27 17 IsfeEfkealk 27
                Is +E++++l+
  MMETSP1325-20131115|4908_1 89 ISIKELQDMLE 99
                9********96 PP

  == domain 4    score: 25.0 bits;  conditional E-value: 3.1e-09
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkkl 29 
                 e+ e+ + +D++gdG+++++Ef ++l++l
  MMETSP1325-20131115|4908_1 109 EVLEIVSDIDVNGDGHLDKDEFYTLLRRL 137
                 678999*******************9975 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.2   2.6e-07    0.0005       8      21 ..       6      19 ..       3      23 .. 0.88
   2 ?    1.2   0.0      0.12   2.3e+02      16      24 ..      89      97 ..      88      98 .. 0.84
   3 !   25.3   0.1   2.9e-09   5.7e-06       7      25 .]     116     134 ..     112     134 .. 0.91

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 2.6e-07
                H--S----B-HHHH CS
   PF13202.1  8 fDlNgDGkIsreEL 21
                +D NgDG I++eE+
  MMETSP1325-20131115|4908_1  6 LDENGDGSIDFEEF 19
                79***********9 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.12
                B-HHHHHHH CS
   PF13202.1 16 IsreELkrl 24
                Is++EL+ +
  MMETSP1325-20131115|4908_1 89 ISIKELQDM 97
                9*****976 PP

  == domain 3    score: 25.3 bits;  conditional E-value: 2.9e-09
                 HH--S----B-HHHHHHHH CS
   PF13202.1   7 afDlNgDGkIsreELkrlv 25 
                  +D+NgDG ++++E+++l+
  MMETSP1325-20131115|4908_1 116 DIDVNGDGHLDKDEFYTLL 134
                 79**************985 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2   2.2e-07   0.00042      45      65 ..       2      22 ..       1      23 [. 0.92
   2 ?   -3.3   0.0       4.8   9.3e+03      41      50 ..      37      46 ..      25      48 .. 0.58
   3 !   25.0   0.1     7e-09   1.4e-05      16      65 ..      88     133 ..      88     134 .. 0.92

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 2.2e-07
   PF13499.1 45 ifkelDkngdGvlsfeEflqa 65
                i+++lD+ngdG ++feEf ++
  MMETSP1325-20131115|4908_1  2 IINTLDENGDGSIDFEEFFAY 22
                79****************987 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 4.8
   PF13499.1 41 vldyifkelD 50
                + d if  +D
  MMETSP1325-20131115|4908_1 37 ISDGIFSLVD 46
                4444555555 PP

  == domain 3    score: 25.0 bits;  conditional E-value: 7e-09
   PF13499.1  16 yldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 +++  eL+ +l  +g +l  +ev e+    + ++D ngdG l+ +Ef+++
  MMETSP1325-20131115|4908_1  88 SISIKELQDMLELTGQNLPADEVLEI----VSDIDVNGDGHLDKDEFYTL 133
                 5999***********99988888888....*****************987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1     7e-06     0.014       8      24 ..       5      21 ..       3      27 .. 0.87
   2 ?    3.7   0.0     0.032        63      17      27 ..      89      99 ..      86     104 .. 0.87
   3 !   17.4   0.1   1.3e-06    0.0025       7      28 ..     115     136 ..     109     139 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 7e-06
                CC-------B---HHHH CS
   PF13405.1  8 lfDkdgdGkidaeELrd 24
                 +D +gdG id+eE+ +
  MMETSP1325-20131115|4908_1  5 TLDENGDGSIDFEEFFA 21
                58************976 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.032
                B---HHHHHHH CS
   PF13405.1 17 idaeELrdaLr 27
                i+++EL+d+L 
  MMETSP1325-20131115|4908_1 89 ISIKELQDMLE 99
                99*******97 PP

  == domain 3    score: 17.4 bits;  conditional E-value: 1.3e-06
                 GCC-------B---HHHHHHH. CS
   PF13405.1   7 klfDkdgdGkidaeELrdaLrk 28 
                   +D +gdG +d++E+  +Lr+
  MMETSP1325-20131115|4908_1 115 SDIDVNGDGHLDKDEFYTLLRR 136
                 568*****************94 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.1    0.0031       6.1      53      68 ..       7      22 ..       2      45 .. 0.79
   2 !   10.6   0.1   0.00017      0.33      36      70 ..     101     135 ..      82     140 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0031
   PF12763.2 53 didedgkldfeefcia 68
                d + dg++dfeef   
  MMETSP1325-20131115|4908_1  7 DENGDGSIDFEEFFAY 22
                5678********9755 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00017
   PF12763.2  36 knskleedklekiwdladidedgkldfeefciamr 70 
                    +l+ d++ +i +  d++ dg+ld +ef   +r
  MMETSP1325-20131115|4908_1 101 TGQNLPADEVLEIVSDIDVNGDGHLDKDEFYTLLR 135
                 5567888888888888999***********88776 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.6   0.00016      0.31       6      65 ..      21      86 ..      16     111 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00016
   PF04546.8  6 aelleqydrveagelrlsdlisGfidpaaaaeeeeaeeeseddeeeeed........dddddededee 65
                a++ e  +++ + ++++sd i  ++d++ +aeeee+e +++ +e+eee+        +  ++e+e+  
  MMETSP1325-20131115|4908_1 21 AYVTEITENTVESDRQISDGIFSLVDQP-DAEEEEEERAKHGEEKEEEEgfnllgccEGAEEEEEE-G 86
                567777888889999************3.3333323333333333333367899885333333333.2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      458  (0.0334991); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 614.34
//
Query:       MMETSP1325-20131115|4903_1  [L=1584]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-51  173.4   3.4    5.4e-51  172.7   2.3    1.4  1  PF00122.15 E1-E2 ATPase
    2.5e-41  141.0   0.0    1.5e-40  138.5   0.0    2.2  1  PF00689.16 Cation transporting ATPase, C-terminus
    3.7e-25   89.5   0.1    7.7e-23   81.9   0.2    3.5  2  PF00702.21 haloacid dehalogenase-like hydrolase
    4.2e-12   46.5   0.0    1.5e-11   44.6   0.0    2.0  1  PF12710.2  haloacid dehalogenase-like hydrolase
    2.7e-10   39.9   0.0    6.2e-10   38.7   0.0    1.6  1  PF13246.1  Putative hydrolase of sodium-potassium ATPase alpha subunit
    8.1e-06   25.1   0.0    1.5e-05   24.2   0.0    1.4  1  PF00690.21 Cation transporter/ATPase, N-terminus
  ------ inclusion threshold ------
      0.015   14.7   6.5       0.14   11.5   4.2    2.4  2  PF08282.7  haloacid dehalogenase-like hydrolase
      0.016   14.5   2.7        4.3    6.6   0.1    3.0  2  PF14248.1  Domain of unknown function (DUF4345)


Domain annotation for each model (and alignments):
>> PF00122.15  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.7   2.3   3.2e-54   5.4e-51       1     230 []     162     394 ..     162     394 .. 0.99

  Alignments for each domain:
  == domain 1    score: 172.7 bits;  conditional E-value: 3.2e-54
  PF00122.15   1 viilavllnalvefvqeykaekalesLkrlspetaatvirdgkeqeipakeLvvGDiviiktGdrvpaDgrlieagslevdesalTGEslpvtksve.....laergnkvfsgtvvlsgegkaiVtatgketeigkiarlvqeaksaetplqkkldrlaklllilvlavailifiislvtdvaeklleallialallvvaiPegLplavtltlavgaqrlakkgvlvrklsaiEt 230
                 v++++v+l+  +e+ qe  ++k++e  +++ p++ a+v+rdgk+q+ipa +LvvGD+  ++ Gd+vpaD+r+++ ++l+v++s+lTGE ++++k+v      + e +n++f gt    g+++a V+ +g++t +g ia+l+   +++ tp++k+++r++k+ + ++++++++  i+ ++ d   + +++l++ + ++v+ +PegL ++vt++l++ a rl kk+v v++l+ +Et
  MMETSP1325-20131115|4903_1 162 VLAVVVFLTGCFEYAQEAESAKTMEGFAGMLPQQ-ANVVRDGKSQQIPATDLVVGDVMTVNMGDKVPADLRMLSVTNLKVEQSSLTGEPDAIAKDVTsfeenPLESKNIAFFGTSAEAGNCTAAVVLIGDDTIMGNIASLAAGGERPPTPINKEIHRFIKIVSGIAVMLGVVFGIVCII-DDPANYVRTLVFVIGIIVANVPEGLLATVTVSLTLTAVRLGKKNVNVKDLEGVET 394
                 6899*****************************9.*************************************************************9*************************************************************************999999999.99999************************************************98 PP

>> PF00689.16  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.5   0.0   8.6e-44   1.5e-40       1     182 []     950    1309 ..     950    1309 .. 0.88

  Alignments for each domain:
  == domain 1    score: 138.5 bits;  conditional E-value: 8.6e-44
  PF00689.16    1 plplsaiqiLwinLvtDslpalaLaleppekdimkrkPr.kkkeplfskkmllri.liqgllqalvtllafflgll..........................................................................................................................................gfgisekenkls..................................................snfaqtaaFitlvlsqifnalnlrsrkeslfkfsgifsnkllllavllslllqvlivyvpglnavfgtaplsleewlialllalvvllvdelrkll 182 
                  pl ls++ iL+++L+tD++pa++La+e++e+dim+r+Pr ++ ++l++ k++  + l++g++qal ++++ff++++                                                                                                                                          +                                                             ++ aqtaaF+++v++q++ ++ +++r  s+ + +g++ n+++l+++  ++ll ++++y+pgl++ + t++l +++w+ +++++++++l+de rk+l
  MMETSP1325-20131115|4903_1  950 PLSLSTVLILCVDLGTDMIPAISLAYEKAESDIMERPPRdQHVDHLVTVKLVSFAyLQIGVFQALGGFYSFFVVMNdygfkmrtlfgnadalggssgipfakdvssisskcpcgggeswdtyvkgldftvsslgmvectgskcngagsndyypeiytpvdggsrywkdtdayedlldkaeqkqggttaatawiaevcdltdddkfgvaftknddW----------YpkeddknkwspnnwpygwgcpygalrptqyckypdiefvgpnpcykgieaLRHAQTAAFVSIVIVQWADLIICKTRILSIYH-QGMQ-NTVMLFGLCSETLLCCALCYIPGLHQGLFTRDLIFWHWCPSMPFSILIFLYDETRKYL 1309
                  6779***********************************9999*********************************9999999999999999999999999999999999999999999999999999999999999999999999998888888888888888888888888888888887777777777777777777777777776666653..........03333333444777778899999999999999999999999999999999999***********************9999999.9995.********************************************************96 PP

>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.9   0.2   4.5e-26   7.7e-23       2     204 .]     399     880 ..     398     880 .. 0.68
   2 ?   -4.0   0.0         8   1.4e+04      87     107 ..    1120    1140 ..    1040    1165 .. 0.62

  Alignments for each domain:
  == domain 1    score: 81.9 bits;  conditional E-value: 4.5e-26
                 CEEEEECCTTTBETHHHH..............................................................HHHHHHHHHHHHHCCCCCSCCHHHHHHHHHHHHHH......................................CEECTCCHCCEECEEEE..........EE...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...................................................................H........................HHHHHHHHHTGEBHHHHHHHHHHHHHTTC.EEEEESSCHHHHHHHHHHTTC............SEEEEHHH......................................................................TTSHHHHHHHHHHHTS-GG.GEEEEESSCTTHHHHHHTS CS
                 xxxxxxxxxxxxxxxxxx..............................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................................xxxxxxxxxxxxxxxxx..........xx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................................................................x........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx............xxxxxxxx......................................................................xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
  PF00702.21   2 ktvvfDktGTLtegepsv..............................................................lgnkaalalaaaletgsehpigkavvaaakanstr......................................tgfatfigrgvsgkvdg..........av...gnpewmtalglrviapdlvaaegqskgrtvvvla...................................................................q........................aralgviafadpvkpeaaeavasLkaagi.vvlltgdnpetaeaiakqagi............dslvfaev......................................................................kPepklfvaaieeLqidpg.evamvGDgvnDapalaaAg 204
                 +++++DktGTLt+++++                                                               +g+  +++ ++a e +     ++a+ ++a    ++                                        f +  + +vs +             av   g  e + +    +  +d+v +++q+k ++ v+++                                                                   +                        + ++g+i+ +dp+++ + + v ++++ag+ vv++tgd+p+ta+aia+ + i            +                                                                             +Pe+k  ++++ + q d g  va++GDgvnD+pal+ A+
  MMETSP1325-20131115|4903_1 399 TCICSDKTGTLTQNKMTSnhiyvefgtatdpdstyevnaitssslgdptpgfdfgdlalakllmtcnlvnatvfntgkvgAGEDNLSRHIQARECLNGNASDIAFFKFAEGCLWKkdgitvgtqpnepmaesmrlanptatvanstgtpskliIPFNSKYKFMVSVNWVAdpsqggklrpAVlmkGAAEQIFQRCGTYVKGDEVVPIDQAKVDHFVKVYdkfgsagervigfamkyldedpayncaqtdedtpdtmevngvpldtsgepikpdasgyyaigsqqflDwggpenvtncmdkcpppatpafdaLTFVGLISLIDPPREVVPDSVLKCRRAGVkVVMVTGDHPKTAAAIARMVNIieqdaetidmyaE------RngfgkdyaaayaaanaefmkkdsnsdenrhmrytksvieakvipghelktmtpdqvkeafmyrdlvfartSPEQK--LKIVNAAQ-DMGhVVAVTGDGVNDSPALRGAD 880
                 78****************88888888888888888888888888888888888888888888888888888888888888666666666666666666666666666666555554443333333333333333333322222222222333322222222222222222343334444322444333333333333355555555555555555555588888888888888888888777777777777777777777777666666666666666666665550555555556666666666677777******************************************************9997755551......45555556666667777777788888888888888888888889999999999999999999999999999*****..********.8888****************997 PP

  == domain 2    score: -4.0 bits;  conditional E-value: 8
                  HHHHHHHHHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxx RF
  PF00702.21   87 iapdlvaaegqskgrtvvvla 107 
                    +dl+++ +q +g+t++++a
  MMETSP1325-20131115|4903_1 1120 AYEDLLDKAEQKQGGTTAATA 1140
                  445666777788888888776 PP

>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   9.1e-15   1.5e-11       1     191 []     401     877 ..     401     877 .. 0.83

  Alignments for each domain:
  == domain 1    score: 44.6 bits;  conditional E-value: 9.1e-15
                 EEE------B---...................HHHHHHHHH--H...HHH.....................................................................................................................................................................................HHHHHHHHHHHHT...-..HHHH----HHHHHHHHHH.........................................................................H--B..........HHHHHHH......HTTEEEE-SS-HHHHHHHHH---EE--B--GGG-----..............................................................HH----HHHHHHHHHSHHHHHHHH---TT----S--EE---GGGHHHHH CS
   PF12710.2   1 avFDkDGTLtedd..tdflryllk........lldvlgealakdaslaslkdst.............................................................................................................................................................................cltlsdpkdllellaey...g..girviglaarylealakeieea..................................................................klfegfi..........pdaaellkelheaglrvvvlsgdprliakpvakelgidevnvlateledeg..............................................................ggkvdgritgkldgKaraverlvvlaykqvggrivvaiGDsanDlpalk 191
                 +++Dk+GTLt+++  +   + +++        ++                                                                                                                                                                                                 +       + +++ + y   g  g+rvig+a +yl++     + +                                                                  ++f g+i          p   + + + ++ag +vv+++gd   +a ++a+ ++i e +  ++++++e                                                               +++v++r +++ + K+ +v++       q+ g+ v++ GD+ nD pal+
  MMETSP1325-20131115|4903_1 401   877
                 79***********532..2222223344443333...................123333333444444788888999999*****************************************************************************************************************************************99998554332.....2.33334443333345788999999999994442.23.2577899999999999999999999999999999999999999999999999*******99988888444444444444432333...333335799********************999999888888884444699999********************************************************999********.9.********......566888*************97 PP

>> PF13246.1  Putative hydrolase of sodium-potassium ATPase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.0   3.6e-13   6.2e-10      18      91 .]     485     596 ..     464     596 .. 0.77

  Alignments for each domain:
  == domain 1    score: 38.7 bits;  conditional E-value: 3.6e-13
   PF13246.1  18 e........ilGdptEaALlvlaeklgvgkd.......................veelreeykkvaelpFnserKrmsvvhk......eke.ylllfvKGAperilerCtki 91 
                 +        ++G+++++A  ++ae +  +kd                         +  + ++    +pFns+ K+m++v+        ++   ++++KGA+e+i++rC ++
  MMETSP1325-20131115|4903_1 485 SrhiqarecLNGNASDIAFFKFAEGCLWKKDgitvgtqpnepmaesmrlanptaTVANSTGTPSKLIIPFNSKYKFMVSVNWvadpsqGGKlRPAVLMKGAAEQIFQRCGTY 596
                 0445556669****************88888************999999988654445678889999*************7455666433345777*************875 PP

>> PF00690.21  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0     9e-09   1.5e-05      31      69 .]     105     143 ..      77     143 .. 0.84

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 9e-09
  PF00690.21  31 kkyGpNelpepkkksllrlflrqfkdplvilLlvaaivs 69 
                    G N+l++p++++ +++fl++   ++ +lL+++ai++
  MMETSP1325-20131115|4903_1 105 NGVGGNQLTPPPEEPCWWKFLKHQLGIFSLLLWGGAILC 143
                 55799********************************97 PP

>> PF08282.7  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.27   4.6e+02      26      54 ..     732     760 ..     728     777 .. 0.83
   2 ?   11.5   4.2   8.4e-05      0.14      85     252 ..     755     911 ..     742     913 .. 0.59

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.27
                 HHHHTT-EEEEEESS-HHHHHCCHCHTTC CS
   PF08282.7  26 klqekgikvviaTGRslsevlplleelgl 54 
                 k++ +g+kvv +TG +++++  +++ +++
  MMETSP1325-20131115|4903_1 732 KCRRAGVKVVMVTGDHPKTAAAIARMVNI 760
                 78999***********9999999887774 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 8.4e-05
                 HHHHHHHHHCTSEEEEE---EEEEC-TT-HHHHHHHCCCTSCEEEES-HCCHS-S--SEEEEE--GGGHHHHHHHHHCCTTTTCEEEEEETTEEEEEE----HHHHHHHHHHHTT--GGGEEEE----TTHHHHHH-TEEEE-TTS-HHH.HHH-SEE---GGG---HH CS
   PF08282.7  85 keiikllkennleillytedkvyvinkksekkakeeeknkkkkeekkeeeelededinkililedkedldelekelkeelnklititsssegsleiipkgvsKgtalkklakalnisleeviafGDgeNDieMLelaglgvAmgnaspev.kaaAdyvtdsnnedGvak 252
                  ++++++++   +i +y e++ + +++     a ++  n+++++++++++e+ +   +k +i+++     el++  +++++           + +++ + +s  + lk ++ a ++    v++ GDg ND + L+ a++g+Amg a   v k+aAd++  + + +++++
  MMETSP1325-20131115|4903_1 755 ARMVNIIEQDAETIDMYAERNGFGKDY----AAAYAAANAEFMKKDSNSDENRHMRYTKSVIEAKVIPGHELKTMTPDQVK-------EAFMYRDLVFARTSPEQKLKIVNAAQDM-GHVVAVTGDGVNDSPALRGADIGCAMGIAGTDVsKEAADMILMTDDFSAIVD 911
                 555666666666666666666666666....44445555555555555555555555555555555555555444444432.......2344445555555555555444433333.2357889********************8765552777787777776688876 PP

>> PF14248.1  Domain of unknown function (DUF4345)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.3    0.0029         5      13      83 ..     283     357 ..     278     360 .. 0.84
   2 ?    6.6   0.1    0.0025       4.3      84     119 ..    1236    1271 ..    1212    1274 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0029
   PF14248.1  13 lvviviGlagvlggastlasgggvlaaa..asldsefRflaGlylalGlll..lagiikikkrrpalallalvif 83 
                 ++v++iG  +++g ++ la+gg+ +++    ++   ++ ++G+ ++lG+++  + +i +++ + ++l++++ +i+
  MMETSP1325-20131115|4903_1 283 AAVVLIGDDTIMGNIASLAAGGERPPTPinKEIHRFIKIVSGIAVMLGVVFgiVCIIDDPANYVRTLVFVIGIIV 357
                 78999********************999767777888999*********98324456688888889999888886 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0025
   PF14248.1   84 igGlgRllSllldglpspalvlalilElvlgpllll 119 
                  i    R+lS+ ++g+ ++ ++++l  E +l   l++
  MMETSP1325-20131115|4903_1 1236 IICKTRILSIYHQGMQNTVMLFGLCSETLLCCALCY 1271
                  45568***********************99877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1584 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 2.18u 0.38s 00:00:02.56 Elapsed: 00:00:01.61
# Mc/sec: 2357.66
//
Query:       MMETSP1325-20131115|4916_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-18   63.4   0.0      1e-17   63.3   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.3   0.0   7.4e-22     1e-17      24     101 ..       6      83 ..       1      84 [] 0.95

  Alignments for each domain:
  == domain 1    score: 63.3 bits;  conditional E-value: 7.4e-22
  PF03028.10  24 lseleefkgleddleksekrwkkwldseapeeeklpkewkkrksalekLlllralrpDrlllavknfveeklgekfve 101
                  +++ +f+++ +++++++++w +++++eape  ++p +  k + +lek+++lralrpDrl+ a+k+f+++++g+ fv+
  MMETSP1325-20131115|4916_1   6 FEAVPAFQDFGEKISSDAEEWMNFYNHEAPETVEIPSSEMKGLGELEKMVILRALRPDRLTFALKKFIKDAMGDTFVT 83 
                 577889**********************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.66
# Mc/sec: 304.99
//
Query:       MMETSP1325-20131115|4917_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|4913_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-09   35.0   3.4    6.4e-09   34.8   2.4    1.0  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
          2    6.6   5.5         19    3.3   3.8    1.9  1  PF11700.3  Vacuole effluxer Atg22 like


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   2.4   9.4e-13   6.4e-09      39     175 ..       2     141 ..       1     168 [. 0.82

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 9.4e-13
  PF07690.11  39 tlyslgyaiasllaGrlsdrfGrrr.vlllglllfalglllllfasslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslg......WravFlilailsllaav.lvllllpr 175
                 ++ ++ +a +s+l+G  +d++G r  v ll++ +++l  ++l f + +    +v  v qGl+++++++a    +  ++ ++  g+a+g+++a  ++G +  pl+ ++++           +++F++++++++l+a+ l    +++
  MMETSP1325-20131115|4913_1   2 SIPYFMSACLSPLLGGTVDKVGGRAiVCLLSASILVLVHYILGFMPDVN--PAVPMVGQGLAYSMFASALWPSVPYTVDENSVGLAYGVITAVQNAGLAGLPLIVSAVYNDSDnlyipyVEVLFIAFGAVGVLSALgL---NILA 141
                 7888999***************9999************55555535655..688899999999999999999999999999****************************555579*9999999**********98832...3333 PP

>> PF11700.3  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   3.8    0.0028        19     339     462 ..      14     130 ..       6     142 .. 0.68

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.0028
   PF11700.3 339 alsrrfglktkqtiiaiivlfeliplyGllGfipavlGlqqpwemyvlavlyglvlgglssysrsmfseliPrGkeaaFFaLfaitdkgssviGpllvglitdrtgniriaflflavLlllplp 462
                 +l  ++ +   ++i++ +++ +l+ +  +lGf+p v   +  + m+  +  y ++ ++l+++     +  +++ + ++ ++  + +++++ +  pl+v+++ + + n+ i+++ ++++ + +++
  MMETSP1325-20131115|4913_1  14 LLGGTVDKVGGRAIVCLLSASILVLVHYILGFMPDV---NPAVPMVGQGLAYSMFASALWPSV----PYTVDENSVGLAYGVITAVQNAGLAGLPLIVSAVYNDSDNLYIPYVEVLFIAFGAVG 130
                 444444444446778888888888888888888886...566668888888888888876654....556888888999999999999999999999999999999988885544433333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.31s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|4919_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1093.34
//
Query:       MMETSP1325-20131115|4924_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0037   15.9   0.0     0.0037   15.9   0.0    1.1  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.7e-07    0.0037      88     108 ..       3      23 ..       1      52 [. 0.91

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.7e-07
  PF00248.16  88 leksLkrlgtdylDllllhrp 108
                 ++k L+ lg+dy+Dl+l+h p
  MMETSP1325-20131115|4924_1   3 MQKTLDDLGLDYVDLYLIHFP 23 
                 7899***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|4927_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-11   42.6   0.0    5.2e-11   42.2   0.0    1.1  1  PF04998.12 RNA polymerase Rpb1, domain 5
    5.1e-07   29.1 106.7      0.002   17.9   7.7    8.7  6  PF05001.8  RNA polymerase Rpb1 C-terminal repeat


Domain annotation for each model (and alignments):
>> PF04998.12  RNA polymerase Rpb1, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   7.6e-15   5.2e-11     227     274 ..       2      48 ..       1      51 [. 0.92

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 7.6e-15
                 HHHHHHHHHH------HHHHHHHHHHHHC------SS----TTS.--- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF04998.12 227 lkeieevfkeegievnrrhlalladlmtakgvllgitraglnkekesf 274
                 ++ ++ev++++g +vn+rh+a l+d+mt++g+l++itr+g+n++ +s+
  MMETSP1325-20131115|4927_1   2 INMLKEVIQFDGNYVNNRHYAVLCDVMTYRGHLMAITRHGINRT-DSG 48 
                 67899**************************************9.554 PP

>> PF05001.8  RNA polymerase Rpb1 C-terminal repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -17.8  17.5         2   1.4e+04       1      14 []     169     184 ..     129     185 .. 0.84
   2 !    8.9   1.2   0.00023       1.6       1      11 [.     186     196 ..     186     199 .. 0.92
   3 !   10.2   3.6   8.7e-05       0.6       3      14 .]     202     213 ..     200     213 .. 0.94
   4 !   17.8   7.8   3.3e-07    0.0022       1      14 []     214     227 ..     214     227 .. 0.98
   5 !   17.9   7.7   2.9e-07     0.002       1      14 []     228     241 ..     228     241 .. 0.98
   6 !   16.2   8.9   1.1e-06    0.0072       1      14 []     242     255 ..     242     255 .. 0.98

  Alignments for each domain:
  == domain 1    score: -17.8 bits;  conditional E-value: 2
   PF05001.8   1 SPa.SPa.YSPtSPgy 14 
                 SPa SPa  ++ SPgy
  MMETSP1325-20131115|4927_1 169 SPAwSPApSGGASPGY 184
                 5555555455588888 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00023
   PF05001.8   1 SPaSPaYSPtS 11 
                 S aSP YSP S
  MMETSP1325-20131115|4927_1 186 SMASPMYSPAS 196
                 679******98 PP

  == domain 3    score: 10.2 bits;  conditional E-value: 8.7e-05
   PF05001.8   3 aSPaYSPtSPgy 14 
                 aSPa+SP SP+y
  MMETSP1325-20131115|4927_1 202 ASPAFSPASPAY 213
                 9*********99 PP

  == domain 4    score: 17.8 bits;  conditional E-value: 3.3e-07
   PF05001.8   1 SPaSPaYSPtSPgy 14 
                 SP+SPaYSPtSP+y
  MMETSP1325-20131115|4927_1 214 SPTSPAYSPTSPAY 227
                 9***********99 PP

  == domain 5    score: 17.9 bits;  conditional E-value: 2.9e-07
   PF05001.8   1 SPaSPaYSPtSPgy 14 
                 SP+SPaYSPtSP+y
  MMETSP1325-20131115|4927_1 228 SPTSPAYSPTSPAY 241
                 9***********99 PP

  == domain 6    score: 16.2 bits;  conditional E-value: 1.1e-06
   PF05001.8   1 SPaSPaYSPtSPgy 14 
                 SP+SPaYSPtSP+y
  MMETSP1325-20131115|4927_1 242 SPTSPAYSPTSPAY 255
                 9***********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.69
# Mc/sec: 889.08
//
Query:       MMETSP1325-20131115|4930_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.62
# Mc/sec: 243.50
//
Query:       MMETSP1325-20131115|4929_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-06   25.2   1.5    1.1e-05   24.9   1.0    1.1  1  PF00038.16 Intermediate filament protein
     0.0013   18.6   0.7     0.0016   18.3   0.5    1.1  1  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
     0.0046   16.0   1.6       0.14   11.2   0.9    1.9  2  PF13851.1  Growth-arrest specific micro-tubule binding
  ------ inclusion threshold ------
       0.01   13.4   0.6      0.014   13.0   0.4    1.2  1  PF01576.14 Myosin tail
      0.014   15.3   1.0        4.9    7.2   0.0    2.3  2  PF11598.3  Cartilage oligomeric matrix protein
      0.016   14.8   1.0       0.25   11.0   0.5    1.9  1  PF07889.7  Protein of unknown function (DUF1664)
      0.016   14.6   0.4      0.019   14.4   0.3    1.1  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
      0.017   15.0   0.7      0.022   14.6   0.5    1.3  1  PF14071.1  Putative coat protein
      0.023   14.3   0.2      0.047   13.3   0.1    1.6  1  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.025   14.7   0.9      0.047   13.9   0.6    1.5  1  PF06156.8  Protein of unknown function (DUF972)
       0.03   12.4   0.4      0.038   12.1   0.3    1.0  1  PF05911.6  Plant protein of unknown function (DUF869)
      0.033   14.1   1.7      0.076   12.9   1.1    1.5  1  PF02050.11 Flagellar FliJ protein
      0.044   13.0   1.0       0.24   10.6   0.8    1.8  2  PF13870.1  Domain of unknown function (DUF4201)
      0.076   11.4   0.4      0.089   11.2   0.3    1.0  1  PF05701.6  Plant protein of unknown function (DUF827)
      0.084   12.6   0.6        0.1   12.3   0.4    1.2  1  PF06428.6  GDP/GTP exchange factor Sec2p
      0.098   10.7   0.3       0.18    9.8   0.1    1.3  1  PF07902.6  gp58-like protein
       0.12   12.3   0.8       0.17   11.9   0.5    1.3  1  PF08702.5  Fibrinogen alpha/beta chain family
       0.24   10.9   1.1        1.6    8.3   0.2    2.2  2  PF07544.8  RNA polymerase II transcription mediator complex subunit 9


Domain annotation for each model (and alignments):
>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   1.0   1.4e-08   1.1e-05     215     288 ..       4      83 ..       2      88 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 1.4e-08
  PF00038.16 215 keeitelrrqiqsleieleslkkqkeslerqlaeleer...leeelkklqekiseleeelqelkeema...rqlreYqeL 288
                 ++ei+++r+q++++  ele+++k++++l   + +l  +   +++e+++ +  is ++e +++ + +++   r+l++Y++L
  MMETSP1325-20131115|4929_1   4 ENEIADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKmdgMQKEITHQKGVISTVSEYVSRFRRDLQassRHLDDYKQL 83 
                 68********************************986611156778888889************99874448999**998 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.5   2.1e-06    0.0016      47     116 ..       7      76 ..       4      94 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 2.1e-06
   PF10473.4  47 aenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervseLeklnsslknlLeekeqe 116
                  ++ +++ve +  ++e+  ++ ++L l + ++r + + ++ke+ ++++ +s   +  s +++ L+   + 
  MMETSP1325-20131115|4929_1   7 IADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSRH 76 
                 677899********************************************************99876653 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.9   0.00019      0.14      33      80 ..       4      51 ..       3      54 .. 0.84
   2 !    6.5   0.0    0.0051       3.9      49      98 ..      41      90 ..      36      95 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00019
   PF13851.1 33 keeiaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkklkq 80
                ++eia+++k+ e+ + +++++ k n+ l   +  ++ +++ ++k++  
  MMETSP1325-20131115|4929_1  4 ENEIADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITH 51
                578999999999999999999999999999999999999999988865 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0051
   PF13851.1 49 lmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkel 98
                +m+ ++ke+   k  + ++ e v   +++l+  +++  ++k+lk +++ l
  MMETSP1325-20131115|4929_1 41 KMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSRHLDDYKQLKVSVRGL 90
                57888889999999999999999999999999999999999999877665 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.4   1.9e-05     0.014     159     240 ..       5      86 ..       2      90 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.9e-05
  PF01576.14 159 aevddlaaqldsiakakleaekkakqlesqlselkvkldelqrqlndltskksrlqsEnseLtrqleeaeaqvsnlsklksq 240
                 +e++d++ q++++  +  +  k  ++l+  + +l+ k+d +q++++  +   s +++  s   r+l++   +++ +++lk +
  MMETSP1325-20131115|4929_1   5 NEIADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSRHLDDYKQLKVS 86 
                 5666777777777777777777777777777777777777777777776666666666666666666666666666666665 PP

>> PF11598.3  Cartilage oligomeric matrix protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1     0.009       6.8      23      33 ..       9      19 ..       8      19 .. 0.89
   2 ?    7.2   0.0    0.0064       4.9      15      32 ..      33      50 ..      29      58 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.009
   PF11598.3 23 direQvkEtal 33
                d+r+Qv+E+ l
  MMETSP1325-20131115|4929_1  9 DMRKQVEEMDL 19
                9********75 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0064
   PF11598.3 15 qilgeLredireQvkEta 32
                 ++g+Lr+ +  + kE++
  MMETSP1325-20131115|4929_1 33 LMIGDLRLKMDGMQKEIT 50
                699*************97 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.5   0.00033      0.25      64     115 ..      36      90 ..       9      94 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00033
   PF07889.7  64 khLsqridnlddkldeqkeiskeikeevteiredlsaik...edvkslkqvvegL 115
                  +L  ++d +++++ +qk ++ +++e v + r+dl+a +   +d k+lk  v+gL
  MMETSP1325-20131115|4929_1  36 GDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSrhlDDYKQLKVSVRGL 90 
                 5677789999999999999999999999999999988762224566666666666 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.3   2.4e-05     0.019      69     141 ..       2      72 ..       1      93 [. 0.84

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.4e-05
   PF07106.8  69 lsdeelnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeanke 141
                 + ++e++++ +++ee+  e+++ +++ s l+  + +L  ++  + +++ei + k  ++ ++e +  ++++ + 
  MMETSP1325-20131115|4929_1   2 PRENEIADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKM--DGMQKEITHQKGVISTVSEYVSRFRRDLQA 72 
                 56789999999999999999999999999999999997555..9************99999999999887655 PP

>> PF14071.1  Putative coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.5   2.9e-05     0.022      54     111 ..      18      74 ..       3      85 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2.9e-05
   PF14071.1  54 seekeeeeekndlleklvelvkkldvnelqehlnklsqaissvqellqqfqeekekks 111
                 + e e+ +++n+ l+ ++  + +l ++ +q+++++ + +is+v e +++f+++ + +s
  MMETSP1325-20131115|4929_1  18 DLELEQYHKSNSALDLMIGDL-RLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASS 74 
                 223333455566666555555.6999************************99877765 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   6.2e-05     0.047      10      70 ..      10      70 ..       3      74 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 6.2e-05
   PF12329.3 10 KdeqIaqLmeEgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerl 70
                 + q+++   E+e++ k++ ++   i  Lr k+  ++kei+ +k  ++ +++ +++ ++ l
  MMETSP1325-20131115|4929_1 10 MRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDL 70
                4578888888999999999999999999999999999999988887777777777766665 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.6   6.2e-05     0.047      14      63 ..       4      53 ..       3      94 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 6.2e-05
   PF06156.8 14 eeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkke 63
                e+++ ++ +++ee+  el++  + n++l+l +  lr +++ +++e ++++
  MMETSP1325-20131115|4929_1  4 ENEIADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQK 53
                688999**********************************9988433332 PP

>> PF05911.6  Plant protein of unknown function (DUF869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3     5e-05     0.038     452     540 ..       6      88 ..       2      93 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5e-05
   PF05911.6 452 eveeieeiledieaeldsverskkkskeqeekv.aenaslveevsaveerseelegavsriselvsslekevkacqdllsgkadlekkve 540
                 e       + d +++ +++  + ++++++++   ++   l  ++  ++++  + +g++s +se+vs++++ ++a +  l++ ++l+ +v+
  MMETSP1325-20131115|4929_1   6 E-------IADMRKQVEEMDLELEQYHKSNSALdLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSRHLDDYKQLKVSVR 88 
                 3.......4444555555555555555555543466669999*******999****************************9999998776 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.1    0.0001     0.076      12      96 ..       5      84 ..       3      87 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.0001
  PF02050.11 12 qeleeaeekleelqqyreeyrqqlsgsmqglsaaelrnyqafisaldeaiaqqqqeleqaekqveqareewqeanqelkklekLe 96
                +e+ ++++++ee+  ++e+y++ +s+         +   +  ++ ++++i +q+  ++   + v++ r+++q+  + l  +++L+
  MMETSP1325-20131115|4929_1  5 NEIADMRKQVEEMDLELEQYHKSNSALD-----LMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSRHLDDYKQLK 84
                6788999999999999999988888888.....78888888999***********************************999997 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.8   0.00032      0.24      49     125 ..       5      81 ..       3      88 .. 0.86
   2 ?    1.7   0.0      0.17   1.3e+02      40      54 ..      76      90 ..      72      93 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00032
   PF13870.1  49 ienqalnekieernkeLkkLkkkttktvhalthlkeklhfleeeleelkkelkekeeklaklrkelykvklerdklr 125
                 +e+  + +++ee + eL++ +k+ +    ++  l+ k+  +++e+ ++k  + +  e   + r+ l     + d ++
  MMETSP1325-20131115|4929_1   5 NEIADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSRHLDDYK 81 
                 789999999********999999999999999****************99999999999999999877666655555 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.17
   PF13870.1 40 hlvdfeqlqienqal 54
                hl+d++ql++ +  l
  MMETSP1325-20131115|4929_1 76 HLDDYKQLKVSVRGL 90
                899******998766 PP

>> PF05701.6  Plant protein of unknown function (DUF827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   0.00012     0.089     260     332 ..       6      78 ..       2      87 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00012
   PF05701.6 260 svasvtkELeeakanlekaaeeekslrslvesLkqeLeeekkeleelkekekeaeeavssLeaelsrtksele 332
                  +a ++k+ ee+  +le+  + +++l  +++ L+ +++ ++ke+ + k   +  +e vs    +l+ +   l+
  MMETSP1325-20131115|4929_1   6 EIADMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFRRDLQASSRHLD 78 
                 57788999**************************************999999999999999999988877665 PP

>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   0.00014       0.1      37      90 ..      12      65 ..       6      84 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00014
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT------- CS
   PF06428.6 37 kmVanArkekeaveeknekleeqLkekelllevlqaqlkeLKelleslekekng 90
                k V++   e e++++ n+ l  ++ + +l+++ +q++++  K +++++++  + 
  MMETSP1325-20131115|4929_1 12 KQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSR 65
                78999999*************************************998765544 PP

>> PF07902.6  gp58-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00024      0.18     260     303 ..      46      92 ..      37      96 .] 0.91

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00024
   PF07902.6 260 sqeiknregavsrvqqdldsyqrrlqdae...dnyssltqTvkGlqs 303
                 ++ei  ++g +s v++ +  ++r lq+     d+y +l+  v+Gl +
  MMETSP1325-20131115|4929_1  46 QKEITHQKGVISTVSEYVSRFRRDLQASSrhlDDYKQLKVSVRGLYK 92 
                 689************************99999************975 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.5   0.00022      0.17      33     107 ..       9      81 ..       4      94 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00022
                 CCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  33 dvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekkiililekkilaqesqir 107
                 d++k++e+++ +Leq++++++  + ++ ++  ++ + qk+   ++ + s vs+ +++    +l +  +++    +
  MMETSP1325-20131115|4929_1   9 DMRKQVEEMDLELEQYHKSNSALDLMIGDLRLKMDGMQKEITHQKGVISTVSEYVSRFR-RDL-QASSRHLDDYK 81 
                 899*************************************9999999999988866544.443.44444444445 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.2    0.0022       1.6      46      79 ..       6      39 ..       5      43 .. 0.91
   2 ?    2.4   0.0      0.15   1.1e+02      47      66 ..      42      61 ..      35      84 .. 0.52

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0022
   PF07544.8 46 elpdisrsveeqeaeIeeleeqiarkrevLkklk 79
                e+ d+ + vee+  e+e+  + ++++  ++ +l+
  MMETSP1325-20131115|4929_1  6 EIADMRKQVEEMDLELEQYHKSNSALDLMIGDLR 39
                789**********************999999987 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.15
   PF07544.8 47 lpdisrsveeqeaeIeelee 66
                ++++++ +  q+  I    e
  MMETSP1325-20131115|4929_1 42 MDGMQKEITHQKGVISTVSE 61
                44444444444444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       821  (0.0600497); expected 273.4 (0.02)
Passed bias filter:                      668  (0.048859); expected 273.4 (0.02)
Passed Vit filter:                        81  (0.00592452); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.52u 0.42s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|4931_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 361.63
//
Query:       MMETSP1325-20131115|4932_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.41s 00:00:00.69 Elapsed: 00:00:00.61
# Mc/sec: 204.28
//
Query:       MMETSP1325-20131115|4933_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 293.35
//
Query:       MMETSP1325-20131115|4934_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-10   39.6   0.0    4.4e-10   39.4   0.0    1.1  1  PF05118.10 Aspartyl/Asparaginyl beta-hydroxylase


Domain annotation for each model (and alignments):
>> PF05118.10  Aspartyl/Asparaginyl beta-hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   3.2e-14   4.4e-10      90     148 ..       2      66 ..       1      77 [. 0.85

  Alignments for each domain:
  == domain 1    score: 39.4 bits;  conditional E-value: 3.2e-14
                 -EEEEEE----TTEEEEEE-EE--..---...-EEEETTEEE----.---EEE-TTS-EEEE--S CS
  PF05118.10  90 gaeiipHrdptnlslrlHLgLatp..deg...cairvdeerkswre.GellifDesfeHeaanes 148
                 +a++  H  p n +l+lH+gL tp   +g   +++rv++ + +w +   +l+fD+s+eHea+n  
  MMETSP1325-20131115|4934_1   2 DAHLQVHAAPSNTRLKLHVGLETPrcADGspsASLRVANTTQTWSKrDSVLFFDDSYEHEAWNSC 66 
                 699********************96544333379**********76267899**********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 350.90
//
Query:       MMETSP1325-20131115|4937_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 508.03
//
Query:       MMETSP1325-20131115|4938_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   12.1   1.4      0.078   11.8   1.0    1.1  1  PF06707.6 Protein of unknown function (DUF1194)


Domain annotation for each model (and alignments):
>> PF06707.6  Protein of unknown function (DUF1194)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.0   5.7e-06     0.078      73     132 ..       6      67 ..       2      75 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 5.7e-06
   PF06707.6  73 saedaeafaarlaaapraaarr..taigeAlefaaallaenpveglrrviDvSGDGpnnegl 132
                 ++++a+a aar+++a+r+aa +     ++A+++a+a+ ++  + g++++   S DGp  eg 
  MMETSP1325-20131115|4938_1   6 EEAKAAAEAARVEEAKRVAAAEeeATAAAAIAAAEAASQDYTCVGWKQTGACSPDGPREEGG 67 
                 456677778888888887665544666778899999999999999************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       852  (0.0623171); expected 273.4 (0.02)
Passed bias filter:                      516  (0.0377414); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 582.64
//
Query:       MMETSP1325-20131115|4936_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 696.30
//
Query:       MMETSP1325-20131115|4939_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 368.67
//
Query:       MMETSP1325-20131115|4941_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.045   13.7   0.0      0.048   13.6   0.0    1.1  1  PF12020.3 TAFA family


Domain annotation for each model (and alignments):
>> PF12020.3  TAFA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.5e-06     0.048      29      63 ..       7      41 ..       3      54 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.5e-06
   PF12020.3 29 sclsgkvagttrakpscvdasivlqkwwcemepcl 63
                +c++g   gt r +ps +  s + + w  ++ep  
  MMETSP1325-20131115|4941_1  7 TCYNGGDNGTLRGNPSQISKSRLSSDWALQLEPMK 41
                69******************************974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.76
# Mc/sec: 176.57
//
Query:       MMETSP1325-20131115|4943_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 387.77
//
Query:       MMETSP1325-20131115|4946_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.18   11.6   7.7       0.18   11.6   5.3    1.1  1  PF05680.7 ATP synthase E chain
        0.2   11.0  13.5       0.23   10.8   9.4    1.0  1  PF06658.7 Protein of unknown function (DUF1168)
       0.22   11.2   7.9       0.24   11.1   5.5    1.1  1  PF09831.4 Uncharacterized protein conserved in bacteria (DUF2058)
       0.56    9.8   7.7       0.62    9.7   5.3    1.0  1  PF08496.5 Peptidase family S49 N-terminal
       0.62    8.1   8.5       0.63    8.1   5.9    1.0  1  PF06375.6 Bovine leukaemia virus receptor (BLVR)
        1.2    9.4   3.7        1.5    9.1   2.5    1.2  1  PF04277.8 Oxaloacetate decarboxylase, gamma chain
        6.9    6.3   7.3        7.9    6.1   5.1    1.1  1  PF05620.6 Protein of unknown function (DUF788)


Domain annotation for each model (and alignments):
>> PF05680.7  ATP synthase E chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   5.3   9.2e-05      0.18      29      68 ..      17      52 ..       7      56 .] 0.73

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.2e-05
   PF05680.7 29 qrslkakakkeekereyeaqekliekakaayakkkqakse 68
                +r+ +     ee++++ e++ek  +kak+ ++kk++a+++
  MMETSP1325-20131115|4946_1 17 KRKFT----GEEEQARREKEEKAAKKAKKKEKKKRAAQEK 52
                44444....4566666689999999999999999988885 PP

>> PF06658.7  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   9.4   0.00012      0.23      65     100 ..      17      52 ..      13      55 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00012
   PF06658.7  65 deefqqkreekekkdeektaKkrekRekkkqkkkkk 100
                 + +f+ + e++++++eek aKk +k ekkk ++++k
  MMETSP1325-20131115|4946_1  17 KRKFTGEEEQARREKEEKAAKKAKKKEKKKRAAQEK 52 
                 5689999***********************999876 PP

>> PF09831.4  Uncharacterized protein conserved in bacteria (DUF2058)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   5.5   0.00012      0.24       9      49 ..      12      52 ..       2      55 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00012
   PF09831.4  9 aGLvdkkkakkakkekrkkkkkakkaaaeeedeakeaveea 49
                +GLv+k+k +  ++++r++k+++  ++a++++++k+a++e+
  MMETSP1325-20131115|4946_1 12 SGLVTKRKFTGEEEQARREKEEKAAKKAKKKEKKKRAAQEK 52
                5899*****99999998888777666555555555555553 PP

>> PF08496.5  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   5.3   0.00032      0.62      60      93 ..      18      51 ..       9      55 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00032
   PF08496.5 60 ealldkeelkalekeekkeekekkkaekkkakka 93
                ++++ +ee+ ++ekeek+++k+kkk++kk+a ++
  MMETSP1325-20131115|4946_1 18 RKFTGEEEQARREKEEKAAKKAKKKEKKKRAAQE 51
                5667788888999999999999999888877665 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.9   0.00032      0.63      84     114 ..      22      52 ..       7      55 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00032
   PF06375.6  84 leeerrhrerlekdkrkkkkrekekrgkrrk 114
                  eee+ +re+ ek  +k kk+ek+kr+ + k
  MMETSP1325-20131115|4946_1  22 GEEEQARREKEEKAAKKAKKKEKKKRAAQEK 52 
                 58999999******99999999999987655 PP

>> PF04277.8  Oxaloacetate decarboxylase, gamma chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.5   0.00077       1.5      34      54 ..      27      47 ..       9      55 .. 0.36

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00077
   PF04277.8 34 kkaapeekaekkaeeaakaes 54
                ++  +eeka+kka++++k ++
  MMETSP1325-20131115|4946_1 27 ARREKEEKAAKKAKKKEKKKR 47
                222222333333333322222 PP

>> PF05620.6  Protein of unknown function (DUF788)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.1    0.0041       7.9     132     168 ..      12      46 ..       9      51 .. 0.53

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0041
   PF05620.6 132 yglvkklgsnasaseeqeaeteeeekskrqeklekrk 168
                 +glv  ++ +++ +eeq   ++ee++ k+ +k+ek+k
  MMETSP1325-20131115|4946_1  12 SGLV--TKRKFTGEEEQARREKEEKAAKKAKKKEKKK 46 
                 6677..3444444444444444466666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1852  (0.135459); expected 273.4 (0.02)
Passed bias filter:                     1102  (0.0806027); expected 273.4 (0.02)
Passed Vit filter:                       167  (0.0122147); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.39u 0.49s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 258.07
//
Query:       MMETSP1325-20131115|4947_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|4948_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-22   76.5   0.0    9.8e-22   76.5   0.0    3.7  3  PF02020.13 eIF4-gamma/eIF5/eIF2-epsilon
     0.0099   15.5   4.3      0.015   14.9   3.0    1.2  1  PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
  ------ inclusion threshold ------
      0.037   13.5   1.7      0.058   12.8   1.2    1.2  1  PF12882.2  NUT protein C terminal
       0.04   12.9   6.2      0.072   12.1   4.3    1.4  1  PF01056.13 Myc amino-terminal region
       0.17   10.9  12.9       0.31   10.1   9.0    1.4  1  PF05432.6  Bone sialoprotein II (BSP-II)
        3.5    5.8  10.6          4    5.6   7.4    1.1  1  PF03344.10 Daxx Family
        9.4    5.6  14.7       0.99    8.8   7.0    1.7  2  PF04546.8  Sigma-70, non-essential region


Domain annotation for each model (and alignments):
>> PF02020.13  eIF4-gamma/eIF5/eIF2-epsilon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -17.4  15.2         7   1.4e+04      77      79 ..      26      28 ..      17      38 .. 0.56
   2 ?    0.7   0.0      0.24   4.6e+02      24      47 ..      91     114 ..      71     130 .. 0.72
   3 !   76.5   0.0     5e-25   9.8e-22       5      83 ..     131     216 .]     127     216 .] 0.89

  Alignments for each domain:
  == domain 1    score: -17.4 bits;  conditional E-value: 7
  PF02020.13 77 eeE 79
                eeE
  MMETSP1325-20131115|4948_1 26 EEE 28
                222 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.24
  PF02020.13  24 llakilklLYdaDiieEeailkWa 47 
                  +  ++++L+d+ ii+  ++ k+a
  MMETSP1325-20131115|4948_1  91 CAYIMVQVLFDENIIKGGQLAKYA 114
                 4456789999*9999988877776 PP

  == domain 3    score: 76.5 bits;  conditional E-value: 5e-25
  PF02020.13   5 vellgalerlc.keneellkllakilklLYdaDiieEeailkWaek..skkyvakegskk....vrkqakpfveWLeeaeeEseee 83 
                 ++l+ga+e+++ k+++++ k+++ +lk+LYd+D++eEe+il Wa++  ++++++ + s+     +r ++++f++WL+ea+eE+++e
  MMETSP1325-20131115|4948_1 131 RHLIGAFEEFFcKHHPSIGKVFPLVLKMLYDEDVLEEEVILDWAAAgvTHQFSPTSVSAPeinaLRASCETFITWLKEADEEEDDE 216
                 5799*****96599********************************955555588888878999*******************876 PP

>> PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   3.0   7.6e-06     0.015      10      75 ..      18      83 ..      10      92 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 7.6e-06
   PF05320.7 10 yesdddeeeeyeeeeedeedaeslessdvsslkqsdykvesaseeiedaessskqvsekikaikkr 75
                ++++++e+ee ee+ee+eeda ++++s+  +l ++++ ++s++   ++++  +  + e+++a +++
  MMETSP1325-20131115|4948_1 18 AAEEEEEDEEEEEDEEEEEDATAAATSSTDELSSTEIVMNSFQAFLDNESPDPAAMVEHVRANQQK 83
                456666667778888888999999999999999999999*********999999999999876665 PP

>> PF12882.2  NUT protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.2     3e-05     0.058      41      88 ..      14      61 ..       5      74 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3e-05
   PF12882.2 41 atGeseekeeeglakqsqEeeelpsdaellsyidkLcsqklfvskVea 88
                 +G + e eee++ +++ Eeee  + a   s++d+L s    ++  +a
  MMETSP1325-20131115|4948_1 14 KSGAAAEEEEEDEEEEEDEEEEEDATAAATSSTDELSSTEIVMNSFQA 61
                679999999999999999********************9888777666 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   4.3   3.7e-05     0.072     216     261 ..       9      50 ..       2      92 .. 0.58

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.7e-05
  PF01056.13 216 pnsssssgedseseeeeeeeeeeeeeeeiDvvtvekrrsssrekes 261
                  +++  sg  +e eeee+eeeee+eeee D  + +    ss  + s
  MMETSP1325-20131115|4948_1   9 GAAAEKSGAAAE-EEEEDEEEEEDEEEEEDATAAAT---SSTDELS 50 
                 345556666666.66777777888888888766655...2222222 PP

>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   9.0   0.00016      0.31     122     165 ..       8      45 ..       2      80 .. 0.46

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00016
   PF05432.6 122 aGdigkkaakedesdedeeeeeeeeeeeeaeveeneqsvnGtst 165
                 +G++ +k+    e   +eee   +eeeee+e ee++ +   ts+
  MMETSP1325-20131115|4948_1   8 GGAAAEKSGAAAE---EEEE---DEEEEEDEEEEEDATAAATSS 45 
                 3333333322222...2222...222222222222222222222 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   7.4    0.0021         4     464     497 ..      16      49 ..       1      89 [. 0.50

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0021
  PF03344.10 464 eeeeeeeeeeeeeeadneeeedleassegegdde 497
                     eeeee+eeee+d+eeeed+ a++ ++ d+ 
  MMETSP1325-20131115|4948_1  16 GAAAEEEEEDEEEEEDEEEEEDATAAATSSTDEL 49 
                 2222233444444444444444444444443333 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   7.0   0.00051      0.99      42      86 ..      12      61 ..       2      88 .. 0.50
   2 ?   -2.1   0.1       1.1   2.1e+03      54      62 ..     202     214 ..     159     216 .] 0.47

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00051
   PF04546.8 42 eeeseddeeeeeddddddededeee.....eseeadegpdpeearerFae 86
                +e+s +++eeee+d++++ede+eee     +++++de    e + + F++
  MMETSP1325-20131115|4948_1 12 AEKSGAAAEEEEEDEEEEEDEEEEEdataaATSSTDELSSTEIVMNSFQA 61
                22222222222221122222222212233555666666666666666655 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.1
   PF04546.8  54 d....dddddede 62 
                      ++ d+e++
  MMETSP1325-20131115|4948_1 202 FitwlKEADEEED 214
                 1334322222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       943  (0.0689731); expected 273.4 (0.02)
Passed bias filter:                      621  (0.0454213); expected 273.4 (0.02)
Passed Vit filter:                       130  (0.00950848); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.72
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|4949_1  [L=551]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   13.3   4.2     0.0075   14.4   1.2    1.6  2  PF06011.7 Transient receptor potential (TRP) ion channel


Domain annotation for each model (and alignments):
>> PF06011.7  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.2   5.5e-07    0.0075     428     495 ..     146     213 ..      93     220 .. 0.91
   2 ?   -1.7   0.0     0.041   5.6e+02     298     362 ..     277     338 ..     225     342 .. 0.66

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5.5e-07
   PF06011.7 428 llkyGflYnqyradavwfvivdlaylfvrslfIgllqssGiaQvvallviEllylilllwirPymdkr 495
                  ++yG lY ++++ +++++i +++  f+   +    ++++  Q +++l i + + ++   ++P+m++ 
  MMETSP1325-20131115|4949_1 146 RKRYGRLYYNFKPIYWYWIILTILRKFCIVSAALIFRDNPTFQLCVILLIMFGAYVVQTKYQPWMSNA 213
                 589******************99999976666666799**************************9876 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.041
   PF06011.7 298 dfwtgfiiflivvalivvvvlqlklilella.rfvkkakeeklaefrkkwlsflkgtllrlvliff 362
                 +f ++   +  v+++++vvv+++ +++e  +  ++++ ++e+l++++   l  + g+ l ++++++
  MMETSP1325-20131115|4949_1 277 EFFWNYNTCESVLLCCAVVVAAMGVMFESQYlSSGSI-EQETLSYLT---LLTIGGSTLYYFVVMW 338
                 4555666666677777777777777777776455554.777766554...5556666666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       590  (0.0431539); expected 273.4 (0.02)
Passed bias filter:                      415  (0.030354); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.92u 0.35s 00:00:01.27 Elapsed: 00:00:00.61
# Mc/sec: 2164.58
//
Query:       MMETSP1325-20131115|4951_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 374.43
//
Query:       MMETSP1325-20131115|4955_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-19   70.1   0.8    1.3e-19   69.9   0.6    1.0  1  PF00472.15 RF-1 domain


Domain annotation for each model (and alignments):
>> PF00472.15  RF-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9   0.6   9.8e-24   1.3e-19      22     100 ..      12      90 ..       6      97 .. 0.89

  Alignments for each domain:
  == domain 1    score: 69.9 bits;  conditional E-value: 9.8e-24
  PF00472.15  22 ssGpGGQnVNkvesaVrlthkptgivvkaqeeRsqeqNrekAlerLkallaeaelkkkrektketrkskkrrlerkski 100
                 s  pGGQ++Nkv ++V+l h+ptg++v++q++Rs ++Nr++A+ +L+++l+ ++  k+ ++  ++ k++k++ ++k++ 
  MMETSP1325-20131115|4955_1  12 SDSPGGQKINKVMNCVQLVHRPTGTTVTCQQFRSLTENRKRARSLLQEKLDLLAFGKESKAGMRIAKAQKKKAAAKRRS 90 
                 7789**************************************************8888888888888888877777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       635  (0.0464453); expected 273.4 (0.02)
Passed bias filter:                      458  (0.0334991); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 469.87
//
Query:       MMETSP1325-20131115|4950_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-63  213.8  15.2    2.6e-63  213.5  10.5    1.0  1  PF01151.13 GNS1/SUR4 family
  ------ inclusion threshold ------
       0.08   12.7   0.2       0.08   12.7   0.2    2.4  2  PF14007.1  YtpI-like protein


Domain annotation for each model (and alignments):
>> PF01151.13  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.5  10.5   3.8e-67   2.6e-63       4     243 ..      37     284 ..      34     295 .. 0.91

  Alignments for each domain:
  == domain 1    score: 213.5 bits;  conditional E-value: 3.8e-67
  PF01151.13   4 sspkvplliallYlllvllgnklmk.....nrkpfklkalvivhNlflavlSlvtfvgmvksllevltk.....aglvdllckddssdegrlrngllaflvllfylsKfvEllDTvflvlkkkqvsfLhvYHHatvmllmwaglryatsspiwffvllNsfvHaimYtYYflaalg.....akklvvpwkrliTtlQilQfvvgllaavyllvsytlkkvgcdtsqapkaaialnllyllslllLFlnffvksyl 243
                 + + +p++++++Y++ +++g k+m      +rk+f+l++ +++++lfl+++S+++++++v++ll ++       +glv +lc   ++ e  + +g ++++v lf++sK++El+DT+f+v+++ +++fLh+YHH+tv+l++w+++ ++ ++++++f+++N+ vHaimY+YYfl +++     +kk+ + ++ +iT++Q+ Q+vvg+++ v +++  + ++++c+ +   k++++ + l++ s++lLFl+ffvk+y 
  MMETSP1325-20131115|4950_1  37 KYWLIPIVLVCFYMASIYFGLKYMGtkkepKRKAFNLRNELAAWSLFLSIFSFCGAIRTVPQLLLNMYDsmskpEGLVFTLC---QHGELGWGDGSTGLWVQLFVYSKIPELFDTFFIVARQSPLIFLHWYHHVTVLLYCWHSYATE-APQALYFIAMNYSVHAIMYMYYFLMMVAkpdsgLKKFLKSIAGMITAMQLSQMVVGIIVQVSSMMVFQEGSESCALN---KENLIAGALMYGSYFLLFLEFFVKRYF 284
                 56789*******************97777677899*************************855544433556689*******...88999*********************************************************.77777777*****************99899999999999******************888888888789999**555...99***********************95 PP

>> PF14007.1  YtpI-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   1.2e-05      0.08       3      48 ..      43      89 ..      41     100 .. 0.88
   2 ?   -1.5   1.7      0.32   2.2e+03      11      59 ..     198     232 ..     188     253 .. 0.58

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.2e-05
   PF14007.1  3 ilivlslvfyvyykvkafrtkdplekkllsakasia.lGlflilfgi 48
                i++v+  ++++y+ +k++ tk++ ++k ++ + ++a  +lfl++f++
  MMETSP1325-20131115|4950_1 43 IVLVCFYMASIYFGLKYMGTKKEPKRKAFNLRNELAaWSLFLSIFSF 89
                789999************************99998627999999987 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.32
   PF14007.1  11 fyvyykvkafrtkdplekkllsakasialGlflilfginqlfllrstvt 59 
                 +y+yy +  + + d+  kk+l++ a +  ++ l+              +
  MMETSP1325-20131115|4950_1 198 MYMYYFLMMVAKPDSGLKKFLKSIAGMITAMQLS--------------Q 232
                 5666666666666666666666655554444333..............3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       575  (0.0420568); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.34s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1351.91
//
Query:       MMETSP1325-20131115|4957_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.56
# Mc/sec: 179.73
//
Query:       MMETSP1325-20131115|4958_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.40s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 173.53
//
Query:       MMETSP1325-20131115|4945_1  [L=409]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-91  304.0   0.0    8.6e-91  303.8   0.0    1.0  1  PF01116.15 Fructose-bisphosphate aldolase class-II
  ------ inclusion threshold ------
      0.078   12.2   0.0       0.15   11.2   0.0    1.4  1  PF13260.1  Protein of unknown function (DUF4051)


Domain annotation for each model (and alignments):
>> PF01116.15  Fructose-bisphosphate aldolase class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.8   0.0   1.3e-94   8.6e-91       2     285 ..      58     407 ..      57     409 .] 0.96

  Alignments for each domain:
  == domain 1    score: 303.8 bits;  conditional E-value: 1.3e-94
  PF01116.15   2 lvslkellkkAkengyAvpafnvnnletinavleaaeekksPvIlqvsegaakya...............gaealaalveaaaekasvpvalhlDHgak.....ledlleaiea........gfsSvMiDgSelpleeNiaitkevverahalgvsvEaElGriggeedgveneee.kealyTdpeeaeefvertgvda...........lAvaiGnvHGvykpglepkldlellkeiqkavs.........dvpLvlHGgsgvpdeeiqeaiklGvvKiNidtdlqlaftkav.......rkylaeqpge...........ydprkllreaeeamkerveekievlgsag 285
                 ++ lk+ll++Ak n++A+p +n++ +++ina++eaa+++  P+++ +s+g+ +++               ga a a +v+++ae ++vpv+lh+DH+ k     ++++l+a e+        +fsS+M+D+Se+pleeNi+i+  +++r++++++++E+ElG++ggeedgv+n+++ +++lyT+pee+++++e++               +A+a+GnvHGvy pg + +l+ e+l++ qk++s         +v +v+HGgsg++ e+iq aik+Gv+K+Nidtd+q+af+++v       r+yl+ q g+           ydpr +lr++ee+m++r+ +++++l++ +
  MMETSP1325-20131115|4945_1  58 GTALKDLLQYAKDNEFAIPGVNIVGTSSINACMEAAKKTGGPIMVTFSRGGGQFIagkaadnsddaaciaGAVAGALHVRTVAELYGVPVILHTDHCCKawlpwFDGMLDANEKyfekngepLFSSHMLDLSEEPLEENIDICYDYLKRMSKVNLLLEMELGITGGEEDGVDNTDVdSSKLYTQPEEVWQVYEKLTSVGkaangddamftVAAAFGNVHGVYAPG-NVRLEPEILHNTQKYISeklgdgnkkPVSFVFHGGSGSSVEDIQYAIKAGVIKMNIDTDTQWAFWDGVreyeatnRDYLQGQIGNpdgddkpnkkyYDPRMMLRSGEESMADRLCDAMKDLNCVD 407
                 57899************************************************************************************************************************************************************************99999***************987666689**********************5.5677888*********999*************************************************77777777777777777************************************9975 PP

>> PF13260.1  Protein of unknown function (DUF4051)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.2e-05      0.15      19      49 ..     148     178 ..     141     182 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 2.2e-05
   PF13260.1  19 flhlkRyCkaFRqDRDaLLeaRnkllrrsde 49 
                 +lh   +Cka+    D +L+a +k++++++e
  MMETSP1325-20131115|4945_1 148 ILHTDHCCKAWLPWFDGMLDANEKYFEKNGE 178
                 79**************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.81
# Mc/sec: 1210.01
//
Query:       MMETSP1325-20131115|4962_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-15   56.8  56.5    0.00086   18.7   5.5    6.0  5  PF07699.8  GCC2 and GCC3
  ------ inclusion threshold ------
      0.058   13.3  48.9       0.78    9.7   0.5    8.1 11  PF00020.13 TNFR/NGFR cysteine-rich region
        0.3    9.5  72.9          3    6.2  23.9    2.7  3  PF03302.8  Giardia variant-specific surface protein
          4    7.5  62.8        2.1    8.3   3.7    6.0  5  PF09463.5  Opy2 protein


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   6.9   3.2e-06     0.011       6      48 .]       4      44 ..       1      44 [. 0.86
   2 !   18.4   2.0   3.1e-07     0.001       1      34 [.      31      63 ..      31      64 .. 0.88
   3 !   17.7   2.1   5.2e-07    0.0018       1      35 [.      63      96 ..      63      97 .. 0.88
   4 !   18.7   5.5   2.5e-07   0.00086       1      35 [.      95     128 ..      95     140 .. 0.77
   5 !   15.3   4.5   2.9e-06      0.01       1      31 [.     143     172 .]     143     172 .] 0.90

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3.2e-06
   PF07699.8  6 kgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48
                +g + C+ C  G+Y+  ++  +C++C  g t s+ g++  sdC
  MMETSP1325-20131115|4962_1  4 TGAESCTDCDSGYYSGAGE-ASCTKCDGG-TYSGAGATACSDC 44
                67789*********98655.56*******.6799*******99 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 3.1e-07
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppg 34
                Gty+ +g   C+ C+ GtY+  +  + C  C +g
  MMETSP1325-20131115|4962_1 31 GTYSGAGATACSDCGAGTYSGAG-ADACSDCEAG 63
                9******************9865.556****875 PP

  == domain 3    score: 17.7 bits;  conditional E-value: 5.2e-07
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgt 35
                G y+++g + C+ C  GtY+  +g  +C +C  gt
  MMETSP1325-20131115|4962_1 63 GDYSSAGASSCTSCAGGTYSA-AGASSCDSCDGGT 96
                89*****************86.56677****9886 PP

  == domain 4    score: 18.7 bits;  conditional E-value: 2.5e-07
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgt 35 
                 Gt++++g+  C++C+ GtY +  g+  C++C  g 
  MMETSP1325-20131115|4962_1  95 GTFSSSGSASCTACEAGTYAEA-GSSACTKCDGGE 128
                 9******************865.5566****9984 PP

  == domain 5    score: 15.3 bits;  conditional E-value: 2.9e-06
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaC 31 
                 Gty+ +g + C+ C  G+Y+  ++  +C++C
  MMETSP1325-20131115|4962_1 143 GTYSGTGAESCTDCDSGYYSGAGEA-SCTKC 172
                 9******************986555.59999 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   1.0     0.076   2.6e+02      17      25 ..       8      16 ..       6      27 .. 0.72
   2 ?    8.8   1.3   0.00044       1.5       1      26 [.      12      33 ..      12      36 .. 0.84
   3 ?    5.7   0.4    0.0041        14       1      22 [.      28      45 ..      28      50 .. 0.70
   4 ?    7.0   0.1    0.0016       5.6       1      24 [.      44      63 ..      44      69 .. 0.75
   5 ?    9.7   0.5   0.00023      0.78       1      26 [.      60      81 ..      60      84 .. 0.77
   6 ?    9.2   1.3   0.00033       1.1       1      27 [.      76      98 ..      76     107 .. 0.75
   7 ?    8.7   1.4   0.00047       1.6       1      28 [.      92     115 ..      92     123 .. 0.78
   8 ?    8.3   0.6    0.0006       2.1       1      24 [.     108     127 ..     108     129 .. 0.81
   9 ?    4.3   2.3     0.011        37       1      26 [.     124     145 ..     124     155 .. 0.74
  10 ?    6.5   1.3    0.0023       7.9       1      23 [.     140     158 ..     140     162 .. 0.74
  11 ?    2.0   1.5     0.057     2e+02       1      21 [.     156     172 .]     156     172 .] 0.69

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.076
                EEE-B-TTC CS
  PF00020.13 17 sCskCepgt 25
                sC+ C++g 
  MMETSP1325-20131115|4962_1  8 SCTDCDSGY 16
                788888864 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00044
                C-TTEEEESSCSEEEEEEE-B-TTCE CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepgtv 26
                C  g+Y+   + +   sC+kC+ gt+
  MMETSP1325-20131115|4962_1 12 CDSGYYSG-AG-E--ASCTKCDGGTY 33
                99999999.66.5..568******97 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.0041
                C-TTEEEESSCSEEEEEEE-B- CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCe 22
                C  gtY+   +   C +C    
  MMETSP1325-20131115|4962_1 28 CDGGTYSG-AGATACSDC---G 45
                999*****.554667555...4 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.0016
                C-TTEEEESSCSEEEEEEE-B-TT CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepg 24
                C  gtY+   + + C   s Ce g
  MMETSP1325-20131115|4962_1 44 CGAGTYSG-AGADAC---SDCEAG 63
                999*****.665888...666665 PP

  == domain 5    score: 9.7 bits;  conditional E-value: 0.00023
                C-TTEEEESSCSEEEEEEE-B-TTCE CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepgtv 26
                Ce g Y++  + + C   ++C  gt+
  MMETSP1325-20131115|4962_1 60 CEAGDYSS-AGASSC---TSCAGGTY 81
                99******.554655...88888886 PP

  == domain 6    score: 9.2 bits;  conditional E-value: 0.00033
                C-TTEEEESSCSEEEEEEE-B-TTCEE CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepgtvl 27
                C  gtY++  + + C    +C+ gt+ 
  MMETSP1325-20131115|4962_1 76 CAGGTYSA-AGASSC---DSCDGGTFS 98
                99******.554655...888888765 PP

  == domain 7    score: 8.7 bits;  conditional E-value: 0.00047
                 C-TTEEEESSCSEEEEEEE-B-TTCEEE CS
  PF00020.13   1 CeegtYtdsknhrqClsCskCepgtvlv 28 
                 C  gt+++ ++ +   sC+ Ce gt++ 
  MMETSP1325-20131115|4962_1  92 CDGGTFSS-SG-S--ASCTACEAGTYAE 115
                 9999****.77.4..457*****99974 PP

  == domain 8    score: 8.3 bits;  conditional E-value: 0.0006
                 C-TTEEEESSCSEEEEEEE-B-TT CS
  PF00020.13   1 CeegtYtdsknhrqClsCskCepg 24 
                 Ce gtY +  + + C   +kC+ g
  MMETSP1325-20131115|4962_1 108 CEAGTYAE-AGSSAC---TKCDGG 127
                 9*******.886766...888877 PP

  == domain 9    score: 4.3 bits;  conditional E-value: 0.011
                 C-TTEEEESSCSEEEEEEE-B-TTCE CS
  PF00020.13   1 CeegtYtdsknhrqClsCskCepgtv 26 
                 C  g+ +d ++++    Cs+C +gt+
  MMETSP1325-20131115|4962_1 124 CDGGEWSDASATS----CSSCGSGTY 145
                 8899999977744....677777765 PP

  == domain 10    score: 6.5 bits;  conditional E-value: 0.0023
                 C-TTEEEESSCSEEEEEEE-B-T CS
  PF00020.13   1 CeegtYtdsknhrqClsCskCep 23 
                 C  gtY+  ++ + C   + C++
  MMETSP1325-20131115|4962_1 140 CGSGTYSG-TGAESC---TDCDS 158
                 999*****.776767...55555 PP

  == domain 11    score: 2.0 bits;  conditional E-value: 0.057
                 C-TTEEEESSCSEEEEEEE-B CS
  PF00020.13   1 CeegtYtdsknhrqClsCskC 21 
                 C  g+Y+   +   C   +kC
  MMETSP1325-20131115|4962_1 156 CDSGYYSG-AGEASC---TKC 172
                 99999*99.563446...555 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  23.1    0.0016       5.6     267     343 ..       4      81 ..       1      90 [. 0.80
   2 ?    1.6  23.0     0.022        74     259     339 ..      28     109 ..      28     115 .. 0.85
   3 ?    6.2  23.9   0.00088         3     258     338 ..      91     172 .]      86     172 .] 0.85

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0016
   PF03302.8 267 tsstvcttcldGyvks..sdacakcdsscetctGaattcktcatGyyksatkevactssesd.kgvtGvkdclscappss 343
                 t + +ct c  Gy       +c+kcd +  + +Ga t+c  c +G y s+++  ac+++e+   +  G + c sca  + 
  MMETSP1325-20131115|4962_1   4 TGAESCTDCDSGYYSGagEASCTKCDGGTYSGAGA-TACSDCGAGTY-SGAGADACSDCEAGdYSSAGASSCTSCAGGTY 81 
                 56779********98855679******99888885.68********9.567788999998754899**********7653 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.022
   PF03302.8 259 csegckectsstvcttcldGyvks..sdacakcdsscetctGaattcktcatGyyksatkevactssesd.kgvtGvkdclsca 339
                 c  g  + + +t+c+ c  G      +dac+ c+++  + +Ga ++c +ca G y  a++ ++c+s+++   +  G + c  c 
  MMETSP1325-20131115|4962_1  28 CDGGTYSGAGATACSDCGAGTYSGagADACSDCEAGDYSSAGA-SSCTSCAGGTYS-AAGASSCDSCDGGtFSSSGSASCTACE 109
                 66778888999*******9977665799*******99988886.68********95.678999*****9967889999999995 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.00088
   PF03302.8 258 vcsegckectsstvcttcldGyvks..sdacakcdsscetctGaattcktcatGyyksatkevactssesd.kgvtGvkdclsc 338
                  c  g  + + s++ct+c  G   +  s+ac+kcd + e    +at+c +c +G y s+t+  +ct+++s   +  G + c +c
  MMETSP1325-20131115|4962_1  91 SCDGGTFSSSGSASCTACEAGTYAEagSSACTKCDGG-EWSDASATSCSSCGSGTY-SGTGAESCTDCDSGyYSGAGEASCTKC 172
                 5777888888999*****999766658999****976.788999**********99.789999******997788899999988 PP

>> PF09463.5  Opy2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.0   0.00066       2.2       8      31 ..       6      29 ..       3      33 .. 0.91
   2 ?    7.1   3.6    0.0015       5.1       9      31 ..      55      77 ..      50      81 .. 0.91
   3 ?    8.3   3.7   0.00063       2.1       9      31 ..      87     109 ..      81     113 .. 0.90
   4 ?    6.2   3.9    0.0029        10       9      31 ..     119     141 ..     114     145 .. 0.89
   5 ?    7.0   3.2    0.0016       5.5       8      30 ..     150     172 .]     146     172 .] 0.93

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00066
   PF09463.5  8 apsCPsCasgetCvltsqtCdeCa 31
                a sC +C+sg++     ++C++C 
  MMETSP1325-20131115|4962_1  6 AESCTDCDSGYYSGAGEASCTKCD 29
                569********************5 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0015
   PF09463.5  9 psCPsCasgetCvltsqtCdeCa 31
                 +C +C+ g + +  + +C++Ca
  MMETSP1325-20131115|4962_1 55 DACSDCEAGDYSSAGASSCTSCA 77
                58********************8 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.00063
   PF09463.5   9 psCPsCasgetCvltsqtCdeCa 31 
                  sC sC+ g+  +  s++C++C 
  MMETSP1325-20131115|4962_1  87 SSCDSCDGGTFSSSGSASCTACE 109
                 59********************6 PP

  == domain 4    score: 6.2 bits;  conditional E-value: 0.0029
   PF09463.5   9 psCPsCasgetCvltsqtCdeCa 31 
                  +C +C+ ge    ++ +C++C 
  MMETSP1325-20131115|4962_1 119 SACTKCDGGEWSDASATSCSSCG 141
                 48********************5 PP

  == domain 5    score: 7.0 bits;  conditional E-value: 0.0016
   PF09463.5   8 apsCPsCasgetCvltsqtCdeC 30 
                 a sC +C+sg++     ++C++C
  MMETSP1325-20131115|4962_1 150 AESCTDCDSGYYSGAGEASCTKC 172
                 569******************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.87u 0.35s 00:00:01.22 Elapsed: 00:00:00.61
# Mc/sec: 675.69
//
Query:       MMETSP1325-20131115|4963_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 350.58
//
Query:       MMETSP1325-20131115|4961_1  [L=467]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 2152.11
//
Query:       MMETSP1325-20131115|4966_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 288.54
//
Query:       MMETSP1325-20131115|4968_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 221.20
//
Query:       MMETSP1325-20131115|4970_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 331.41
//
Query:       MMETSP1325-20131115|4973_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   13.4   0.0      0.021   13.2   0.0    1.0  1  PF09214.6 Bacteriophage Prd1, adsorption protein P2


Domain annotation for each model (and alignments):
>> PF09214.6  Bacteriophage Prd1, adsorption protein P2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.5e-06     0.021     401     461 ..      42     100 ..      29     119 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.5e-06
                 --HHHHHHHHHHH----------EESSSEEEEHHHHH-S----------EEEES------T CS
   PF09214.6 401 gskaaidewlanntglyplsfgldksalleiprrsleaiqpqdvpgqddlfildesaayas 461
                  s  ++d+  a + g  pls  l + +l+e+pr +l      d+ g+  l+ ld+s+ y s
  MMETSP1325-20131115|4973_1  42 DSTDPLDDATAADGG--PLSNPLCNVTLIELPRLKLRLKPRTDADGEVRLYLLDHSGWYVS 100
                 677788888888777..99*****************9888899****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.31s 00:00:00.69 Elapsed: 00:00:00.64
# Mc/sec: 468.04
//
Query:       MMETSP1325-20131115|4974_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 354.85
//
Query:       MMETSP1325-20131115|4977_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 317.88
//
Query:       MMETSP1325-20131115|4969_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-26   90.9   5.3    5.6e-26   90.2   3.7    1.3  1  PF01158.13 Ribosomal protein L36e


Domain annotation for each model (and alignments):
>> PF01158.13  Ribosomal protein L36e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   3.7   4.1e-30   5.6e-26       3      98 ..       2      98 ..       1      99 [. 0.90

  Alignments for each domain:
  == domain 1    score: 90.2 bits;  conditional E-value: 4.1e-30
  PF01158.13  3 rsglavGlnkGhkvtkkkkkprp.srrkgklskrtklvrelirevaGfapyEkrvieLlkvskd...kralkfakkrlGthkrakrkreelsnvlaaqrk 98
                ++g+avGlnkG+ v k   k rp  r kg+++ +++l re++rev+G+  yE+r++++lk++ +   kr  kfakkrlGthkra +k+e++++v+a++r 
  MMETSP1325-20131115|4969_1  2 STGIAVGLNKGFPVEK---KARPaGRCKGAKTAKAELCREVVREVSGLLAYERRLMDMLKIGGAsaeKRMYKFAKKRLGTHKRANKKKEDVKDVYARMRA 98
                579***********97...444405669********************************9876677******************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       590  (0.0431539); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 939.37
//
Query:       MMETSP1325-20131115|4978_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.8   0.6       0.18   11.5   0.4    1.1  1  PF10947.3 Protein of unknown function (DUF2628)


Domain annotation for each model (and alignments):
>> PF10947.3  Protein of unknown function (DUF2628)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.4   1.3e-05      0.18      46      99 ..      33      88 ..      17      90 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.3e-05
   PF10947.3 46 gfl.wllyrrlwlka.aiylllsvalaivllllev..akglallllllialvlglean 99
                +++ ++++r+  +++ ++++l++ + a+vl  +e+  a+ + +ll+++++ +lg+ a 
  MMETSP1325-20131115|4978_1 33 YPFeFAVMRSSFVAGiICIILATGLKAVVL--FEPqlAMEVGVLLTITMITILGFVAD 88
                444377777777777555555555556655..44455999999***********9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 470.71
//
Query:       MMETSP1325-20131115|4980_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 878.66
//
Query:       MMETSP1325-20131115|4981_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 390.98
//
Query:       MMETSP1325-20131115|4982_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-26   91.5   0.1    6.1e-26   91.3   0.0    1.0  1  PF02138.13 Beige/BEACH domain


Domain annotation for each model (and alignments):
>> PF02138.13  Beige/BEACH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.3   0.0   4.4e-30   6.1e-26      85     164 ..       8      87 .]       2      87 .] 0.96

  Alignments for each domain:
  == domain 1    score: 91.3 bits;  conditional E-value: 4.4e-30
                 ----B---S--HHHHHHHTTTSTTHHHHHHHH-------TTTSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS-TT- CS
  PF02138.13  85 kpflysshysspltvlsylvrlePftslaielqsgkfdeadrlfssieealesvleskndvkEliPEffylpeflknkne 164
                  pf+y+shys++++v+++l+r+ePftsla+++q+g+fd +drlf s+++a++ + +++ d+kEliPE+fy+p++++n+n+
  MMETSP1325-20131115|4982_1   8 IPFMYGSHYSNAGIVVHFLIRQEPFTSLAVNFQGGHFDCPDRLFISMQSAWHACNTNSLDFKELIPELFYDPDVFVNSNQ 87 
                 589**************************************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|4983_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 256.16
//
Query:       MMETSP1325-20131115|4984_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|4986_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 396.13
//
Query:       MMETSP1325-20131115|4987_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       75  (0.00548566); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 140.16
//
Query:       MMETSP1325-20131115|4989_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-07   31.1   0.9    1.4e-07   30.8   0.7    1.2  1  PF07699.8 GCC2 and GCC3
    0.00012   21.6   0.9    0.00015   21.2   0.6    1.3  1  PF07562.9 Nine Cysteines Domain of family 3 GPCR
  ------ inclusion threshold ------
        0.3   11.1   1.7        3.7    7.6   0.2    2.1  2  PF08779.5 SARS coronavirus X4 like
       0.51    9.7   4.2        2.4    7.5   0.4    2.1  2  PF11781.3 RNA polymerase I-specific transcription initiation factor Rrn7


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.7     4e-11   1.4e-07       6      39 ..      10      43 ..       6      51 .. 0.82

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 4e-11
   PF07699.8  6 kgnkkCepCprGtYkneegqkkCiaCppgttTsk 39
                 ++  C +Cp G Y  ++g  +Ci Cp+gt+ + 
  MMETSP1325-20131115|4989_1 10 DEEADCDACPAGKYVGTTGASECIDCPSGTYEED 43
                55679************************76555 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.6   4.5e-08   0.00015      27      52 ..      14      39 ..      13      48 .. 0.95

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 4.5e-08
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeq 52
                dC  Cp+g+++ +t++ +C +Cp+++
  MMETSP1325-20131115|4989_1 14 DCDACPAGKYVGTTGASECIDCPSGT 39
                7**********************986 PP

>> PF08779.5  SARS coronavirus X4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.019        65      19      34 ..      17      32 ..      14      34 .. 0.77
   2 ?    7.6   0.2    0.0011       3.7      20      28 ..      35      43 ..      31      50 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.019
                SS----EE------EE CS
   PF08779.5 19 pcpsGtyeGnspfapl 34
                 cp+G y G +  + +
  MMETSP1325-20131115|4989_1 17 ACPAGKYVGTTGASEC 32
                7******998766555 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0011
                S----EE-- CS
   PF08779.5 20 cpsGtyeGn 28
                cpsGtye +
  MMETSP1325-20131115|4989_1 35 CPSGTYEED 43
                ******965 PP

>> PF11781.3  RNA polymerase I-specific transcription initiation factor Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.2     0.009        31       7      19 ..      13      23 ..       8      29 .. 0.75
   2 ?    7.5   0.4    0.0007       2.4      11      26 ..      32      47 ..      26      47 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.009
   PF11781.3  7 pniaCgvCrarwf 19
                 +  C+ C+a ++
  MMETSP1325-20131115|4989_1 13 AD--CDACPAGKY 23
                34..****99865 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0007
   PF11781.3 11 CgvCrarwfrsddGfy 26
                C  C++  + +ddG y
  MMETSP1325-20131115|4989_1 32 CIDCPSGTYEEDDGEY 47
                667***********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|4990_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0027   17.1   0.2     0.0033   16.8   0.1    1.2  1  PF12516.3 Protein of unknown function (DUF3719)


Domain annotation for each model (and alignments):
>> PF12516.3  Protein of unknown function (DUF3719)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   2.4e-07    0.0033      10      47 ..      10      46 ..       7      65 .. 0.73

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2.4e-07
   PF12516.3 10 qtqeLqeEcqeWaasfpHLRilGrqlvipkdegfqyyp 47
                q+++L + c  W++  pHL   G q+++   + ++  p
  MMETSP1325-20131115|4990_1 10 QDPSLHSACAVWTTECPHLVTRGWQITRE-PRFVRVAP 46
                799********************999654.55555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|4992_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00032   20.7   0.1    0.00047   20.2   0.1    1.3  1  PF06985.6 Heterokaryon incompatibility protein (HET)


Domain annotation for each model (and alignments):
>> PF06985.6  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   3.4e-08   0.00047       4      58 ..      30      76 ..      28      82 .. 0.82

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 3.4e-08
   PF06985.6  4 LSYvWgdsedkeeielngkelsvtenledalrqlrkdgerylWiDaiCInqddda 58
                +S+ W d+ +k+          v e+  +  + ++k    ++W D++CI+q++ +
  MMETSP1325-20131115|4992_1 30 MSHSWHDDAKKK--------WAVLEKHVAQFKKTHKGRSPTFWLDKVCIDQSNIS 76
                799999887644........4577888888899999999************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 397.80
//
Query:       MMETSP1325-20131115|4993_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 216.59
//
Query:       MMETSP1325-20131115|4994_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 302.94
//
Query:       MMETSP1325-20131115|4996_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 488.31
//
Query:       MMETSP1325-20131115|4995_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 442.72
//
Query:       MMETSP1325-20131115|4997_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|4999_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|5001_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   12.1   0.3       0.11   12.0   0.2    1.1  1  PF01313.14 Bacterial export proteins, family 3


Domain annotation for each model (and alignments):
>> PF01313.14  Bacterial export proteins, family 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.2   8.1e-06      0.11      16      69 ..      15      68 ..       3      69 .] 0.88

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.1e-06
  PF01313.14 16 llsaplllvalvvGllvslfQAaTqiqEqTLsfvpKllavllvllllgpwmlat 69
                l++   +++a+   +++s +  +T  +  TL+f+ +l++ +  +ll++++ +++
  MMETSP1325-20131115|5001_1 15 LAVYWNVVTAVYLVIFISPLNKLTDGNGRTLAFATRLATQAKLFLLAAEVATSK 68
                566777999*****************************9999999998887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.60
# Mc/sec: 275.58
//
Query:       MMETSP1325-20131115|5003_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.065   12.6   0.3      0.079   12.3   0.2    1.2  1  PF06305.6 Protein of unknown function (DUF1049)


Domain annotation for each model (and alignments):
>> PF06305.6  Protein of unknown function (DUF1049)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   5.8e-06     0.079      39      66 ..      23      50 ..      17      52 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.8e-06
   PF06305.6 39 svlfllklrrqlrrlqkqlkklekeldq 66
                 + +++ ++++ rrl+k+ k +e+++++
  MMETSP1325-20131115|5003_1 23 VMARVFNHNVKQRRLEKEAKEAEEKAKA 50
                56789******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       882  (0.0645114); expected 273.4 (0.02)
Passed bias filter:                      584  (0.042715); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.50s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 231.08
//
Query:       MMETSP1325-20131115|5004_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-09   36.5   0.0    4.2e-09   36.5   0.0    1.0  1  PF00004.24 ATPase family associated with various cellular activities (AAA)


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   0.0   3.1e-13   4.2e-09      50      98 ..       2      50 ..       1      52 [] 0.91

  Alignments for each domain:
  == domain 1    score: 36.5 bits;  conditional E-value: 3.1e-13
                HHHHHHTS-SEEEEEETGGGC-HHH.SS..TTHCHHHHHHHHHHHHHTTT CS
  PF00004.24 50 fkeakekakpsilfiDEidalaksr.sgseseeeervvnqLlteldgvkk 98
                f+ a+  a ps +fiDEid++a+sr s++e+e ++rv  +L+ ++dgv +
  MMETSP1325-20131115|5004_1  2 FEMARYYA-PSTIFIDEIDSVAGSRgSDGEHEASRRVKTELMVQMDGVGS 50
                67788887.****************9999*****************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.67
# Mc/sec: 185.99
//
Query:       MMETSP1325-20131115|5005_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|5008_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        69  (0.00504681); expected 273.4 (0.02)
Passed bias filter:                       69  (0.00504681); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|5009_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0054   15.5   2.0     0.0061   15.3   1.4    1.0  1  PF02181.18 Formin Homology 2 Domain
     0.0068   16.3   3.5     0.0087   15.9   2.4    1.1  1  PF02050.11 Flagellar FliJ protein
  ------ inclusion threshold ------
      0.012   15.3   2.9      0.018   14.8   2.0    1.4  1  PF06657.8  Centrosome microtubule-binding domain of Cep57
      0.012   15.6   1.9      0.014   15.4   0.7    1.5  2  PF09537.5  Domain of unknown function (DUF2383)
      0.013   15.4   2.1      0.019   14.9   1.4    1.3  1  PF08702.5  Fibrinogen alpha/beta chain family
      0.016   14.9   7.1      0.023   14.3   0.9    2.2  2  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.022   13.6   2.4      0.024   13.5   1.7    1.1  1  PF13949.1  ALIX V-shaped domain binding to HIV
      0.032   12.2   2.1      0.036   12.0   1.5    1.0  1  PF08326.7  Acetyl-CoA carboxylase, central region
      0.034   13.5   4.4       0.11   11.9   0.2    2.8  3  PF09045.5  L27_2
      0.045   12.5   1.4       0.05   12.4   1.0    1.2  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
      0.048   12.2   2.0      0.055   11.9   1.4    1.0  1  PF12825.2  Domain of unknown function in PX-proteins (DUF3818)
      0.051   13.1   0.6      0.066   12.7   0.4    1.3  1  PF08656.5  DASH complex subunit Dad3
      0.061   13.2   3.9      0.068   13.1   2.1    1.5  2  PF02970.11 Tubulin binding cofactor A
      0.067   12.9   3.8       0.08   12.6   2.7    1.1  1  PF12130.3  Protein of unknown function (DUF3585)
       0.07   12.9   4.1      0.083   12.6   2.8    1.1  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein
      0.088   11.6   0.5        0.1   11.4   0.4    1.0  1  PF05023.9  Phytochelatin synthase
        0.1   11.9   3.4       0.12   11.8   2.3    1.1  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
       0.12   12.5   3.9       0.48   10.5   2.0    2.0  2  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.12   12.2   4.0       0.19   11.6   2.8    1.4  1  PF06133.6  Protein of unknown function (DUF964)
       0.15   11.5   1.0       0.17   11.3   0.7    1.1  1  PF02981.10 Restriction endonuclease FokI, recognition domain
       0.16   11.8   3.0        0.4   10.6   1.5    1.8  1  PF08738.5  Gon7 family
       0.21   11.0   4.0       0.25   10.7   2.8    1.2  1  PF04156.9  IncA protein
       0.24    9.3   1.0       0.26    9.3   0.7    1.2  1  PF11336.3  Protein of unknown function (DUF3138)
       0.27   10.7   3.8       0.39   10.2   2.7    1.3  1  PF04696.8  pinin/SDK/memA/ protein conserved region
       0.36   10.4   5.1       0.75    9.4   3.5    1.4  1  PF04859.7  Plant protein of unknown function (DUF641)
       0.97    9.7   6.7        4.4    7.6   0.3    2.3  2  PF04102.7  SlyX
        1.3    8.6   4.9        3.5    7.2   3.4    1.7  1  PF07544.8  RNA polymerase II transcription mediator complex subunit 9


Domain annotation for each model (and alignments):
>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.4   1.2e-05    0.0061     263     332 ..      13      77 ..       8      83 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.2e-05
                 HHHTTTHHHCCTS-HHHHHHHHHHHHHHHHHHHHHHHCHHTTSSTT-THHHHHHHHHHHHHHHHHHHHHH CS
  PF02181.18 263 sselsnvekaakvdleelekdvkklekglkklekelekseekeeesdkfvekleefleeaeeklkkleee 332
                  ++++ +ek+ ++++ +l+k++k+l+++++ ++ + +++ +     + ++++l+  ++e ee ++ l++ 
  MMETSP1325-20131115|5009_1  13 ADKIAALEKMHSMKVRALQKSLKTLQDQVQYFKSSSKEHRR-----SALIQQLRNAVKEQEEVVDVLKQR 77 
                 56789999999999999999999999999999999888887.....******************999986 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   2.4   1.7e-05    0.0087      12      75 ..      21      78 ..      10      83 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.7e-05
  PF02050.11 12 qeleeaeekleelqqyreeyrqqlsgsmqglsaaelrnyqafisaldeaiaqqqqeleqaekqv 75
                +       k+ +lq+++  ++ q +      s+++ +  +a+i++l+ a+++q++ ++ +++++
  MMETSP1325-20131115|5009_1 21 KMHSM---KVRALQKSLKTLQDQVQYFK---SSSKEHRRSALIQQLRNAVKEQEEVVDVLKQRL 78
                33333...33444444444433333333...6679999***********************987 PP

>> PF06657.8  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   2.0   3.5e-05     0.018      28      67 ..      29      68 ..      13      76 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.5e-05
   PF06657.8 28 hlkmeyqeladelkkldaslskrkrkeLaqeleellkrlE 67
                 l+  +++l+d+++  ++s+++++r  L+q+l++ +k+ E
  MMETSP1325-20131115|5009_1 29 ALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAVKEQE 68
                68999*******************************9876 PP

>> PF09537.5  Domain of unknown function (DUF2383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       2.3   1.2e+03      52      75 ..       3      26 ..       2      29 .. 0.75
   2 ?   15.4   0.7   2.8e-05     0.014       3      59 ..      27      83 ..      25      85 .] 0.95

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 2.3
   PF09537.5 52 aevralggepeesgslagklhraw 75
                +e+ a gg++ ++  ++ k+h + 
  MMETSP1325-20131115|5009_1  3 HEMVAAGGDAADKIAALEKMHSMK 26
                577888888888888888888775 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 2.8e-05
   PF09537.5  3 vnaLndLietlndgeegyekaaekvkdpelkalfqemaaereqaaaeLqaevralgg 59
                v+aL++ ++tl d ++ ++ + ++ ++++l + +++ ++e e+ ++ L++++ + g+
  MMETSP1325-20131115|5009_1 27 VRALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQRLVDKGE 83
                799************************************************999886 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   1.4   3.8e-05     0.019      77     130 ..      24      81 ..      10      84 .. 0.70

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.8e-05
                 HHHHHHHHHHHHHHH..HHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  77 dniesavskslekki..ililekkilaqe..sqirvLqevlrsneskiqrLeqdiaqk 130
                 ++++ a++ksl++    +++++ +  ++   + i++L++ ++++e+ +  L+q +++k
  MMETSP1325-20131115|5009_1  24 SMKVRALQKSLKTLQdqVQYFKSSSKEHRrsALIQQLRNAVKEQEEVVDVLKQRLVDK 81 
                 4666777777776666656666666555411569999999999999999999987765 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.4     0.062        31      27      50 ..      19      42 ..      11      47 .. 0.62
   2 ?   14.3   0.9   4.6e-05     0.023      24      58 ..      46      80 ..      44      84 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.062
   PF12329.3 27 kelkhnntikkLrkknkelekeie 50
                 e+ h+ +++ L+k++k l+ +++
  MMETSP1325-20131115|5009_1 19 LEKMHSMKVRALQKSLKTLQDQVQ 42
                455566666666666666666655 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 4.6e-05
   PF12329.3 24 LskkelkhnntikkLrkknkelekeieelkkklek 58
                 s+ke++ ++ i +Lr  +ke+e+ ++ lk++l +
  MMETSP1325-20131115|5009_1 46 SSSKEHRRSALIQQLRNAVKEQEEVVDVLKQRLVD 80
                699***************************99855 PP

>> PF13949.1  ALIX V-shaped domain binding to HIV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.7   4.7e-05     0.024     217     266 ..      28      76 ..      13      79 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4.7e-05
                 ---HHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHH- CS
   PF13949.1 217 esllkelkeaneeflqdkkskyekkerekvlqrleeaydkykelssnlek 266
                 ++l k lk++ +++  + ks++++  r+ ++q+l++a+++ +e+++ l++
  MMETSP1325-20131115|5009_1  28 RALQKSLKTLQDQVQYF-KSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQ 76 
                 45555566555555555.566789999*****************999987 PP

>> PF08326.7  Acetyl-CoA carboxylase, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.5   7.2e-05     0.036     253     317 ..      15      77 ..      12      84 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.2e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXX......XXXXXXXXXXXXXXXXXXXXXX CS
   PF08326.7 253 eiLiqsklpsleeRkaqleaiLrslesvteskygeseakrreakleslkelvdsktavfDvLasl 317
                 +i    k+ s++     l+++L+ l++ ++  +++s+++rr+a  ++l++ v+ +++v+DvL + 
  MMETSP1325-20131115|5009_1  15 KIAALEKMHSMK--VRALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQR 77 
                 555666788888..567999*******999999999**************************553 PP

>> PF09045.5  L27_2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   0.00021      0.11      43      57 ..      27      41 ..      12      42 .. 0.90
   2 ?   -1.2   0.0       2.7   1.4e+03      50      57 ..      57      64 ..      52      68 .. 0.73
   3 ?    2.5   0.1      0.18        92       8      22 ..      70      84 ..      65      85 .] 0.88

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00021
   PF09045.5 43 iLaLqkSiqqLkdqv 57
                + aLqkS++ L+dqv
  MMETSP1325-20131115|5009_1 27 VRALQKSLKTLQDQV 41
                569***********9 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 2.7
   PF09045.5 50 iqqLkdqv 57
                iqqL++ v
  MMETSP1325-20131115|5009_1 57 IQQLRNAV 64
                67777655 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.18
   PF09045.5  8 aveRLqakLkErGdv 22
                +v+ L+ +L ++G+ 
  MMETSP1325-20131115|5009_1 70 VVDVLKQRLVDKGEA 84
                8999*********95 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.0   9.9e-05      0.05     110     155 ..      16      62 ..       5      83 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 9.9e-05
   PF10186.4 110 saqlekrraeqlaklqeeikrtksklns.lesltaekRsqlcrelak 155
                  a lek+++ +++ lq+++k ++++++   +s+++++Rs l+++l++
  MMETSP1325-20131115|5009_1  16 IAALEKMHSMKVRALQKSLKTLQDQVQYfKSSSKEHRRSALIQQLRN 62 
                 56788999999999999999999999998888899999999998876 PP

>> PF12825.2  Domain of unknown function in PX-proteins (DUF3818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.4   0.00011     0.055      97     156 ..      22      80 ..      15      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00011
   PF12825.2  97 lqrifsmvLnddlkefekeikelekkikdeaksevlleklkkyveadedkkeeireeaek 156
                 ++++ +  L++ lk+++++++  ++++k+ ++ + l+++l++ v+++e++++ +++  ++
  MMETSP1325-20131115|5009_1  22 MHSMKVRALQKSLKTLQDQVQYFKSSSKE-HRRSALIQQLRNAVKEQEEVVDVLKQRLVD 80 
                 56777889***************998888.89******************9999987665 PP

>> PF08656.5  DASH complex subunit Dad3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   0.00013     0.066      13      45 ..      28      62 ..      17      76 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00013
   PF08656.5 13 qrLaenlkkLseelkeLestespte..elldnLRe 45
                + L+++lk+L+++++  +s++++++  +l+++LR+
  MMETSP1325-20131115|5009_1 28 RALQKSLKTLQDQVQYFKSSSKEHRrsALIQQLRN 62
                679999***********66666655559******8 PP

>> PF02970.11  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1       1.7   8.9e+02      62      71 ..      28      37 ..      12      42 .. 0.48
   2 ?   13.1   2.1   0.00013     0.068      23      66 ..      37      80 ..      28      84 .. 0.78

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 1.7
                HHHHHHHHHH CS
  PF02970.11 62 krlqkavadL 71
                + lqk+++ L
  MMETSP1325-20131115|5009_1 28 RALQKSLKTL 37
                2233333333 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00013
                HHHHHHHHHHHHH----HHHHHHHHHH---TTTHHHHHHHHHHH CS
  PF02970.11 23 veqqeerveklkaegedeydlkkqeeVlketekmlpdlkkrlqk 66
                +++q +  ++  +e+++++ +++ ++++ke e+++  lk+rl +
  MMETSP1325-20131115|5009_1 37 LQDQVQYFKSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQRLVD 80
                45555555555556789999*********************976 PP

>> PF12130.3  Protein of unknown function (DUF3585)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.7   0.00016      0.08      77     129 ..      25      77 ..      15      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00016
   PF12130.3  77 eeqadleqeLrallakeekeKteedkqkEeeLlkelvklVekRdelvdsleed 129
                  +  +l+++L++l  +    K+++++++  +L+++l + V++ +e+vd l ++
  MMETSP1325-20131115|5009_1  25 MKVRALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQR 77 
                 56789*******************************************99874 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.8   0.00016     0.083      61     122 ..      20      81 ..      11      84 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00016
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHS-S---- CS
   PF07200.8  61 kaqlqdkleelkkleekyeekkqkldelsskyspealkelLqaaakkadeeseelaekfleg 122
                  +  + k+  l+k  ++++++ q  +++s++   +al ++L++a+k+ +e  + l ++++++
  MMETSP1325-20131115|5009_1  20 EKMHSMKVRALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQRLVDK 81 
                 5555677888888888888888888899***************************9999886 PP

>> PF05023.9  Phytochelatin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.4    0.0002       0.1      93     154 ..       6      67 ..       1      69 [. 0.89

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0002
   PF05023.9  93 vkkeGltLdelselakankasvklfkasdlsleefrkllkealsrdgrfvivnysrkalgqt 154
                 v   G   d+++ l k ++++v++ + s  +l++ ++  k+++++++r  ++++ r+a++++
  MMETSP1325-20131115|5009_1   6 VAAGGDAADKIAALEKMHSMKVRALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAVKEQ 67 
                 6667777899***************99999999999999*******************9987 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.3   0.00023      0.12      74     133 ..      19      79 ..      12      84 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00023
   PF07106.8  74 lnkldae.ieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLe 133
                 l+k+    + +l++ ++ l+++++  ++  k+  ++  +++l++ ++e ++ v+  +++L 
  MMETSP1325-20131115|5009_1  19 LEKMHSMkVRALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQRLV 79 
                 5666544488899999999999999999888888888899999999999999888888885 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.0   0.00095      0.48      17      63 ..      24      69 ..      14      75 .. 0.82
   2 ?    5.3   0.5     0.041        21       6      27 ..      57      78 ..      53      83 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00095
   PF05531.7 17 ddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenIqd 63
                + kV alq++++ +q++++ ++  ++k  + sa +++l ++v++ ++
  MMETSP1325-20131115|5009_1 24 SMKVRALQKSLKTLQDQVQYFK-SSSKEHRRSALIQQLRNAVKEQEE 69
                679**************99977.567778999999999999987555 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.041
   PF05531.7  6 LlvIradikavddkVdalqqqv 27
                  + r+++k+ ++ Vd+l+q++
  MMETSP1325-20131115|5009_1 57 IQQLRNAVKEQEEVVDVLKQRL 78
                568999**********999876 PP

>> PF06133.6  Protein of unknown function (DUF964)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.8   0.00037      0.19      31      83 ..      23      73 ..      11      78 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00037
                HSHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHTSHHHHHH CS
   PF06133.6 31 adeeakklieefkklqeeiqekqqqgkeeakeeeqklqelkreidknekvaef 83
                +  ++++l +++k lq ++q ++ + ke+    ++ +q+l+ +++++e+v + 
  MMETSP1325-20131115|5009_1 23 HSMKVRALQKSLKTLQDQVQYFKSSSKEH--RRSALIQQLRNAVKEQEEVVDV 73
                567899**********************9..5666677777777777776654 PP

>> PF02981.10  Restriction endonuclease FokI, recognition domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.7   0.00034      0.17      20      66 ..      33      77 ..      16      81 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00034
  PF02981.10 20 dlkeLvkvvsifdedskvhkelkdtkieelvkeldlrkeLvsvlnqr 66
                 lk L + v+ f+  sk h+      i++l +  + ++e+v+vl+qr
  MMETSP1325-20131115|5009_1 33 SLKTLQDQVQYFKSSSKEHRRS--ALIQQLRNAVKEQEEVVDVLKQR 77
                6999***************975..56677777777789999999997 PP

>> PF08738.5  Gon7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.5   0.00079       0.4      43      97 ..      11      67 ..       3      75 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00079
   PF08738.5 43 edrdkpseakv...tyLseLRaslttlQddiNefLTermeedkkkeakkakekseeed 97
                +++dk ++  +       +L++sl+tlQd++  f     e+ +++  ++ +++  +e+
  MMETSP1325-20131115|5009_1 11 DAADKIAALEKmhsMKVRALQKSLKTLQDQVQYFKSSSKEHRRSALIQQLRNAV-KEQ 67
                4444444333334467789************99988888888877777655444.332 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.8    0.0005      0.25     125     173 ..      27      77 ..      11      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.0005
   PF04156.9 125 lksleerlesleesikelakeirelr..eeisdlkeevqelrselerlqed 173
                  ++l+++l++l+++++ + ++ +e r  + i++l+++v+e++++++ l+++
  MMETSP1325-20131115|5009_1  27 VRALQKSLKTLQDQVQYFKSSSKEHRrsALIQQLRNAVKEQEEVVDVLKQR 77 
                 478889999999998888888888888889**************9999665 PP

>> PF11336.3  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.7   0.00051      0.26      16      52 ..      16      52 ..       2      77 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00051
   PF11336.3 16 glaaaaskaeqikalqaqlaalqqqvkelraalaakp 52
                 +a ++ ++ +++alq+ l++lq qv+ ++++ + ++
  MMETSP1325-20131115|5009_1 16 IAALEKMHSMKVRALQKSLKTLQDQVQYFKSSSKEHR 52
                3455788999*****************9998855444 PP

>> PF04696.8  pinin/SDK/memA/ protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.7   0.00077      0.39      17      64 ..      34      80 ..      20      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00077
   PF04696.8 17 lgTLqkfkqeeskktekekrraeierkleeqekeereelekekrelle 64
                l+TLq+  q   k+ +ke+rr++  ++l +  ke++e ++  k+ l+ 
  MMETSP1325-20131115|5009_1 34 LKTLQDQVQY-FKSSSKEHRRSALIQQLRNAVKEQEEVVDVLKQRLVD 80
                78****9995.9999******************999999999997665 PP

>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.5    0.0015      0.75      48     107 ..      14      81 ..      10      84 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0015
   PF04859.7  48 DkavvaeLkkLselkrlyrrkeakgs..........akdailaaeiqeqrsllktyeivvkkLeaelrak 107
                 Dk  +a L+k+ ++k + ++k  k             k+++  a iq++r+++k+ e vv+ L++ l  k
  MMETSP1325-20131115|5009_1  14 DK--IAALEKMHSMKVRALQKSLKTLqdqvqyfkssSKEHRRSALIQQLRNAVKEQEEVVDVLKQRLVDK 81 
                 55..46777777777777766665555667777777788899999****************999988666 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.3    0.0088       4.4      32      57 ..      25      50 ..      16      56 .. 0.63
   2 ?    5.4   0.9     0.043        22      19      41 ..      56      78 ..      53      83 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0088
   PF04102.7 32 keidrlqrqlrllaerlkeleessne 57
                +++++lq+ l+ l+++++  ++ss+e
  MMETSP1325-20131115|5009_1 25 MKVRALQKSLKTLQDQVQYFKSSSKE 50
                55666677777777776666644433 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.043
   PF04102.7 19 tieeLNevvaeqqkeidrlqrql 41
                +i++L ++v eq++ +d l+++l
  MMETSP1325-20131115|5009_1 56 LIQQLRNAVKEQEEVVDVLKQRL 78
                68888888888888888888765 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   3.4    0.0069       3.5       9      71 ..      13      81 ..       7      84 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0069
   PF07544.8  9 fdllkeiekdpnldskdletatsslkhrlqkaraaveelpd......isrsveeqeaeIeeleeqiark 71
                +d + ++ek + + ++ l++++  l+ + q  ++  +e         + + v+eqe+ +  l++++  k
  MMETSP1325-20131115|5009_1 13 ADKIAALEKMHSMKVRALQKSLKTLQDQVQYFKSSSKEHRRsaliqqLRNAVKEQEEVVDVLKQRLVDK 81
                566677777788899999999999999999999999885557777778888888888888888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1707  (0.124854); expected 273.4 (0.02)
Passed bias filter:                     1102  (0.0806027); expected 273.4 (0.02)
Passed Vit filter:                       175  (0.0127999); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.55
# Mc/sec: 370.35
//
Query:       MMETSP1325-20131115|5006_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   13.7   0.6      0.021   13.7   0.4    1.7  2  PF08381.6 Transcription factor regulating root and shoot growth via Pin3


Domain annotation for each model (and alignments):
>> PF08381.6  Transcription factor regulating root and shoot growth via Pin3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.26   3.5e+03      44      48 ..     120     124 ..     116     129 .. 0.71
   2 ?   13.7   0.4   1.6e-06     0.021      33      53 ..     179     199 ..     156     204 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.26
   PF08381.6  44 kkWWe 48 
                 + WW+
  MMETSP1325-20131115|5006_1 120 EFWWK 124
                 56997 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 1.6e-06
   PF08381.6  33 FSrkrfsekeAkkWWeeNker 53 
                 F  +  +e++A +WW+eN+er
  MMETSP1325-20131115|5006_1 179 FDTSEWTEEKAFEWWQENHER 199
                 777778999**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 1260.69
//
Query:       MMETSP1325-20131115|5011_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.4   1.5       0.12   11.9   1.0    1.3  1  PF08134.6 cIII protein family


Domain annotation for each model (and alignments):
>> PF08134.6  cIII protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.0   8.6e-06      0.12      32      43 ..       2      13 ..       1      14 [. 0.91

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.6e-06
   PF08134.6 32 aakkqLeaLCam 43
                aakkqL a Ca+
  MMETSP1325-20131115|5011_1  2 AAKKQLSASCAV 13
                9**********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.26u 0.40s 00:00:00.66 Elapsed: 00:00:00.52
# Mc/sec: 152.08
//
Query:       MMETSP1325-20131115|5013_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-14   53.4   0.0    3.5e-14   53.1   0.0    1.1  1  PF00175.16 Oxidoreductase NAD-binding domain


Domain annotation for each model (and alignments):
>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.0   2.5e-18   3.5e-14      10      99 ..       2      98 .]       1      98 [] 0.96

  Alignments for each domain:
  == domain 1    score: 53.1 bits;  conditional E-value: 2.5e-18
                HHHHHHHHHHCC.HCCCEEEEEEEESSGGGSTTHHHHHHHHHHSTTEEEEEEC........TTTTCSSSSBB--HHHHHHHCHHHHHHCTTTEEEEEE- CS
  PF00175.16 10 plrsvlkalled.edetkvvlvyGvrteedlllreeleelakklpgrlkvvav........srtddgwkggkgyvtdalleelleeeidkeetdvyvCG 99
                p+++v++++l++ +d+tkv l++++ + +d+ll+e++++l +++p+r++v++v         +  + w+gg g++++++ + +l+  + +++ +v+vCG
  MMETSP1325-20131115|5013_1  2 PMLQVIEEVLRNkDDKTKVKLMFANVNPDDILLKEQIDALVAANPDRFEVFYVlnnppsgiMSMFSPWTGGVGFINEEMCKSHLP--APSDDIKVFVCG 98
                9**********999****************************************9999888888899******************..8899*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|5012_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.69
# Mc/sec: 531.37
//
Query:       MMETSP1325-20131115|5014_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   14.7   2.4       0.02   14.3   1.7    1.3  1  PF00800.13 Prephenate dehydratase
      0.074   12.1   0.3      0.099   11.7   0.2    1.1  1  PF04104.9  Eukaryotic and archaeal DNA primase, large subunit


Domain annotation for each model (and alignments):
>> PF00800.13  Prephenate dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.7   2.9e-06      0.02      92     153 ..     124     182 ..      71     193 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.9e-06
                 -TTT--EEEE-HHHHHHTHHHHHH-.TTSEEEE-S-----HHHHHHCT-TTEEEEE-S---- CS
  PF00800.13  92 kleeikkvyShpqalgQcskfLeenlpqaervavsStaaAaekvkassdetaaaIaselaae 153
                 +  e ++ y+h q  +Q++  L+++  + ++++ + t++Aa     ++ ++aaa a+ +aa+
  MMETSP1325-20131115|5014_1 124 QHPELHEEYAHFQRHQQVQYLLHQQDLEKRFREEEETSRAAGD--TDKADKAAAAAA-HAAS 182
                 44677888*****************788889************..333333333332.2222 PP

>> PF04104.9  Eukaryotic and archaeal DNA primase, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   1.4e-05     0.099      12      99 ..      82     166 ..      73     180 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.4e-05
                 HHTT-G---B----EEE-HHHH---HHHHHHHHHHH..........HCCCCHSS---HHHHHHHH---.............TTSSTTG CS
   PF04104.9  12 dlvkrrrvllkkGyaylpkeeleslllekfrkrlekalestkeslpeleeeieederekleelleelsesyvaedvqeeedskisakn 99 
                 dlv++ +  +   +a+ p + ++s l e  +  +++ + +t+++ pel+ee+ + +r++  +++  l+++ +++   eee+++  a +
  MMETSP1325-20131115|5014_1  82 DLVESAKA-MVSAMALAPSDGVISRLAEDLETYVSRTMTQTYQQHPELHEEYAHFQRHQ--QVQYLLHQQDLEKRFREEEETSRAAGD 166
                 55554433.347799***************************************99944..444444433455554444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1117  (0.0816998); expected 273.4 (0.02)
Passed bias filter:                      553  (0.0404476); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.62
# Mc/sec: 792.34
//
Query:       MMETSP1325-20131115|5017_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 387.77
//
Query:       MMETSP1325-20131115|5018_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-44  151.5   0.0    2.7e-44  151.4   0.0    1.0  1  PF04898.9  Glutamate synthase central domain
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.15   11.8   0.0    1.2  1  PF02325.12 YGGT family


Domain annotation for each model (and alignments):
>> PF04898.9  Glutamate synthase central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.4   0.0     4e-48   2.7e-44       6     105 ..       3     102 ..       1     105 [] 0.98

  Alignments for each domain:
  == domain 1    score: 151.4 bits;  conditional E-value: 4e-48
                 HH----HHHHHHTHHHHHH-----EEE----S--TTT-SS---GGGGEEE----SSS----TTTTGGG-B--EEE------SS--GGGG-EEEESSSB-- CS
   PF04898.9   6 kafgyteeelelllspmaeegkealgsMGdDtplavLsekprllydYFkQlFaqVTNPpiDplREelvmsletnlGkegnlleeseeqakrlklesPils 105
                 ++fgyt+e++++ll pma  gkealgsMG+D++lavLs++pr+++dYFkQlFaqVTNPpiDp+REe+vmsl + +G+e nll   +e++ rl +++Pil+
  MMETSP1325-20131115|5018_1   3 NMFGYTTETMDMLLYPMAVGGKEALGSMGNDAALAVLSTQPRNVFDYFKQLFAQVTNPPIDPIREEMVMSLVCPVGPEANLLVAGPEHCARLMVNHPILT 102
                 78*************************************************************************************************8 PP

>> PF02325.12  YGGT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.2e-05      0.15      16      46 ..      37      67 ..      34      78 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.2e-05
  PF02325.12 16 allsWvpanrynplvrflyqltePllrpfRr 46
                a+ls  p n    + ++  q+t+P++ p+R 
  MMETSP1325-20131115|5018_1 37 AVLSTQPRNVFDYFKQLFAQVTNPPIDPIRE 67
                566666644445555***************4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|5023_1  [L=236]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.5   0.2        1.3    8.8   0.0    2.9  2  PF00514.18 Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   9.5e-05       1.3      15      40 ..      50      77 ..      39      78 .. 0.75
   2 ?    3.8   0.0    0.0035        48       2      33 ..      80     113 ..      79     120 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 9.5e-05
                HHHHHHHC..-SSHHHHHHHHHHHHHHH CS
  PF00514.18 15 ppLvqLLk..sgdeevqeeAawALsNLa 40
                ++ + +L+   ++ ++qe  +wAL N+a
  MMETSP1325-20131115|5023_1 50 DAVLGCLRhnLEHAKIQEMGCWALVNMA 77
                555555555557899***********98 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.0035
                 HHHHHHHHHCHHHHHHHHHHC..-SSHHHHHHHH CS
  PF00514.18   2 penkqavieaGavppLvqLLk..sgdeevqeeAa 33 
                 +++kqa+ + G++++ v+ ++   ++++vq  A+
  MMETSP1325-20131115|5023_1  80 SSHKQALLHGGVIQVIVSAMDahPTNKKVQYRAL 113
                 5789****************99888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 1154.16
//
Query:       MMETSP1325-20131115|5024_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   25.4   0.0    1.5e-05   25.1   0.0    1.1  1  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   1.1e-09   1.5e-05      23      73 ..      22      73 ..      15      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 1.1e-09
                SEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEETTEEEEEEEESEEE.E CS
  PF00070.22 23 kkVtvierrdrllraldeeiakilqkklekngievllntkveeiegsadg.v 73
                 k+t++e+++r+l  + + ++++  ++le+ g+ v +++ v++++g  +  +
  MMETSP1325-20131115|5024_1 22 VKITLLEAAPRILGPFTKSLSDYAVEHLENVGVSVQTGSCVTKVTGPHKAtL 73
                599******************************************8777533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 382.58
//
Query:       MMETSP1325-20131115|5019_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 1010.23
//
Query:       MMETSP1325-20131115|5025_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-05   23.0   8.3    4.8e-05   23.0   5.8    1.9  2  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   5.8   3.5e-09   4.8e-05       4      31 .]       6      33 ..       3      33 .. 0.83
   2 ?   -0.6   0.1     0.084   1.1e+03      28      31 .]      39      42 ..      36      45 .. 0.70

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 3.5e-09
                SEEE.E..E----EEEEETTT--EESS-- CS
  PF00397.21  4 gWeersd.dddGrvYYyNheTgetqWekP 31
                +We++++ d+ +r+Y+y+++T +++W +P
  MMETSP1325-20131115|5025_1  6 DWEKHWSeDR-QRWYWYDPATDRSSWSDP 33
                6**5564266.***************999 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.084
                SS-- CS
  PF00397.21 28 WekP 31
                We P
  MMETSP1325-20131115|5025_1 39 WEVP 42
                6666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.55
# Mc/sec: 313.70
//
Query:       MMETSP1325-20131115|5020_1  [L=312]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0085   16.3   0.0      0.015   15.5   0.0    1.5  1  PF12680.2 SnoaL-like domain


Domain annotation for each model (and alignments):
>> PF12680.2  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-06     0.015      16      77 ..     139     216 ..     119     250 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.1e-06
                 HHHTEEEEEEEECTS--E---HHHHHHHTTHHHCEECEEEEEEEEESSTT..........EEEEEEEEE-E........E CS
   PF12680.2  16 laallapdvvwedpfgelrGrealraffrallaafpdlrfevedviadgd..........rvvvrwtvtgt........i 77 
                 + +l+a d+ ++dp  +l+G+ ++++ + ++++   + r++v+  +++g+           v+v w+ +g+        i
  MMETSP1325-20131115|5020_1 139 IPELFASDFKFQDPDVKLKGIRNYAQGVTKIFD--ATSRVQVVSTVVNGTrsddqgeladVVTVTWRISGGvnilgglkI 216
                 569***********99***************97..667777777777775445566666577778999987666555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.79
# Mc/sec: 946.41
//
Query:       MMETSP1325-20131115|5021_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.041   13.5   0.0      0.065   12.9   0.0    1.3  1  PF00531.17 Death domain


Domain annotation for each model (and alignments):
>> PF00531.17  Death domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.7e-06     0.065      40      71 ..      61      93 ..      47      96 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.7e-06
                HHHHHHHHHHHHHH..TTTSBHHHHHHHHTTTT CS
  PF00531.17 40 rsqtyelLqlWeqr.egenatlgaLleaLrklg 71
                 ++t ++Lq+W+ + eg  a+l +L e L  +g
  MMETSP1325-20131115|5021_1 61 VDPTGKMLQRWSLQgEGAAAKLMRLEERLANIG 93
                69************9999999999999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 710.19
//
Query:       MMETSP1325-20131115|5029_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 164.19
//
Query:       MMETSP1325-20131115|5034_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.64
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|5032_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.2e-49  166.1  10.2    1.2e-48  165.7   7.1    1.0  1  PF05346.6 Eukaryotic membrane protein family
  ------ inclusion threshold ------
       0.18   11.6   0.4       0.18   11.6   0.3    2.2  2  PF12564.3 Type III restriction/modification enzyme methylation subunit


Domain annotation for each model (and alignments):
>> PF05346.6  Eukaryotic membrane protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.7   7.1   1.7e-52   1.2e-48      95     240 ..       4     152 ..       2     155 .. 0.96

  Alignments for each domain:
  == domain 1    score: 165.7 bits;  conditional E-value: 1.7e-52
   PF05346.6  95 llaliyivlHalvlllqvvslNvavnSssnaLltlllsnqfvEiKstVFKkfekeslfqivaaDvvERfqlllmlliialrnlvelilpnsfti...svlspllvvlgsEvlvDwiKhayilkfNkikpevyrrfldvllkdvllsrsl 240
                 l+al+y+v+H+++ +++v +lNva+nS ++aLltll+sn+f+EiK +VFKkf++++lfq++ +Dv+ERf+l+l++ +++l nlv  + +  f+    s l+++ +v++ Ev+ DwiKha+i+kfN +++++y  f+ vl++dv+++r++
  MMETSP1325-20131115|5032_1   4 LVALVYVVCHSFLFFVNVATLNVAINSADQALLTLLISNNFAEIKTSVFKKFDENNLFQVASSDVTERFKLFLFMGLVLLLNLVTSSAEDDFIEvlkSHLYQISLVFIAEVFADWIKHAFITKFNVLSSDLYADFMFVLARDVTETRHN 152
                 589*****************************************************************************************9888899999*****************************************976654 PP

>> PF12564.3  Type III restriction/modification enzyme methylation subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   2.7e-05      0.18       2      31 ..      32      63 ..      31      66 .. 0.93
   2 ?   -1.5   0.1      0.34   2.3e+03      26      26 ..     107     107 ..      92     127 .. 0.55

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.7e-05
   PF12564.3  2 DekLlklLLenek..ikkrFfkkidgiliFki 31
                D++Ll+lL++n+   ik   fkk d+ ++F++
  MMETSP1325-20131115|5032_1 32 DQALLTLLISNNFaeIKTSVFKKFDENNLFQV 63
                99**********888***************87 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.34
   PF12564.3  26 i 26 
                 +
  MMETSP1325-20131115|5032_1 107 S 107
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       612  (0.044763); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 795.39
//
Query:       MMETSP1325-20131115|5035_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-10   39.7   2.2      0.012   15.5   0.0    3.1  3  PF13516.1  Leucine Rich repeat
    3.1e-06   26.3   0.1        1.8    8.7   0.0    3.2  3  PF00560.28 Leucine Rich Repeat
    4.5e-06   26.0   0.0     0.0037   16.7   0.0    2.2  2  PF12799.2  Leucine Rich repeats (2 copies)
     0.0024   17.6   0.1         12    6.5   0.0    3.3  3  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.012   15.2   0.1      0.048   13.3   0.1    1.8  1  PF13855.1  Leucine rich repeat
       0.08   12.3   3.5       0.47    9.8   2.4    2.0  1  PF10682.4  Glycoprotein of human cytomegalovirus HHV-5
        0.8    9.1   3.9        5.3    6.5   0.5    2.2  3  PF04528.8  Adenovirus early E4 34 kDa protein conserved region


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.1   4.4e-05     0.086       1      24 []      11      35 ..      11      35 .. 0.92
   2 !   10.1   0.0   0.00032      0.63       1      23 [.      37      60 ..      37      61 .. 0.90
   3 !   15.5   0.0   5.9e-06     0.012       1      23 [.      63      85 ..      63      86 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.4e-05
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLan 24
                + nLt+++L ++  ++d  + aLan
  MMETSP1325-20131115|5035_1 11 CANLTTIHLDGCRnLTDAAVIALAN 35
                77**********66*********97 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00032
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + nL + dL ++  ++d  + aLa
  MMETSP1325-20131115|5035_1 37 CANLVTVDLRDCRnLTDAAVIALA 60
                779*********66*****99998 PP

  == domain 3    score: 15.5 bits;  conditional E-value: 5.9e-06
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaLa 23
                + nL +++L++++i+d  + aLa
  MMETSP1325-20131115|5035_1 63 CANLVTIHLNGCDITDAAVIALA 85
                77*****************9998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00092       1.8       1      14 [.      13      27 ..      13      38 .. 0.85
   2 !    8.3   0.0    0.0013       2.6       1      14 [.      39      53 ..      39      63 .. 0.87
   3 !    6.0   0.0    0.0071        14       1      14 [.      65      78 ..      65      86 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00092
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL++++L+g+ nlt+
  MMETSP1325-20131115|5035_1 13 NLTTIHLDGCrNLTD 27
                8************97 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0013
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL + dL+++ nlt+
  MMETSP1325-20131115|5035_1 39 NLVTVDLRDCrNLTD 53
                899**********97 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.0071
                TESEEEETSSBCBC CS
  PF00560.28  1 nLeeLdLsgNnlts 14
                nL +++L+g+ +t+
  MMETSP1325-20131115|5035_1 65 NLVTIHLNGCDITD 78
                899*********96 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0016       3.2      23      41 ..      11      30 ..       6      35 .. 0.77
   2 !   16.7   0.0   1.9e-06    0.0037       2      42 ..      39      82 ..      37      85 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0016
   PF12799.2 23 LpnLktLnLsnN.pisdlsa 41
                + nL+t++L+++ +++d  +
  MMETSP1325-20131115|5035_1 11 CANLTTIHLDGCrNLTDAAV 30
                679*********55999654 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 1.9e-06
   PF12799.2  2 nLevLdLsnN.nIkdlppela...nLpnLktLnLsnNpisdlsaL 42
                nL ++dL+++ n++d    +a    + nL t++L+++ i+d  ++
  MMETSP1325-20131115|5035_1 39 NLVTVDLRDCrNLTDAAV-IAlatHCANLVTIHLNGCDITDAAVI 82
                99********77**9666.443358***************97655 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0061        12       2      15 ..      13      27 ..      12      32 .. 0.91
   2 ?    3.2   0.0     0.072   1.4e+02       2      15 ..      39      53 ..      38      57 .. 0.83
   3 ?    4.2   0.0     0.035        68       2      15 ..      65      78 ..      64      82 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0061
   PF13504.1  2 nLkeLdLsgnr.Lts 15
                nL++ +L g+r Lt+
  MMETSP1325-20131115|5035_1 13 NLTTIHLDGCRnLTD 27
                8*********99985 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.072
   PF13504.1  2 nLkeLdLsgnr.Lts 15
                nL + dL+++r Lt+
  MMETSP1325-20131115|5035_1 39 NLVTVDLRDCRnLTD 53
                666779****99985 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.035
   PF13504.1  2 nLkeLdLsgnrLts 15
                nL + +L+g+++t+
  MMETSP1325-20131115|5035_1 65 NLVTIHLNGCDITD 78
                788889*****995 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   2.5e-05     0.048       2      61 .]      13      76 ..      12      76 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.5e-05
   PF13855.1  2 nLkeLdLsnN.rlkvipdgaFk.glsnLkvLdLs.gnnlksisp.eafkgLpsLreLnLsgNrl 61
                nL++++L+++ +l++ +  a+  ++ nL + dL  + nl+      +  ++ +L  + L g+++
  MMETSP1325-20131115|5035_1 13 NLTTIHLDGCrNLTDAAVIALAnHCANLVTVDLRdCRNLTDAAViALATHCANLVTIHLNGCDI 76
                9*******9889****998887689*********999998775515689999999999999987 PP

>> PF10682.4  Glycoprotein of human cytomegalovirus HHV-5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.4   0.00024      0.47      50      95 ..      21      65 ..       3      89 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00024
   PF10682.4 50 kcqkvfegwvyavyhkgdmalmtldvyccrqkdsnsvvafshhped 95
                 c+ + +  v a+  +   +l+t+d++ cr+  + +v+a++ h ++
  MMETSP1325-20131115|5035_1 21 GCRNLTDAAVIALANHC-ANLVTVDLRDCRNLTDAAVIALATHCAN 65
                47778888888876554.699******************9999876 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.5    0.0027       5.3      80     116 ..       4      40 ..       1      51 [. 0.72
   2 ?    6.4   0.8    0.0028       5.5      74     114 ..      24      64 ..      22      73 .. 0.81
   3 ?    2.9   0.3     0.034        67      74     100 ..      50      76 ..      47      89 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0027
   PF04528.8  80 vvlvCksCaelseisvrcCarrtrellrralkllekr 116
                 v+ + ++Ca+l+ i+++ C + t + +  +++ +++ 
  MMETSP1325-20131115|5035_1   4 VIALATHCANLTTIHLDGCRNLTDAAVIALANHCANL 40 
                 6777788999999999999988888777777666654 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0028
   PF04528.8  74 gllnnlvvlvCksCaelseisvrcCarrtrellrralklle 114
                  l++  v+ + ++Ca+l  + +r C + t + +  +++ ++
  MMETSP1325-20131115|5035_1  24 NLTDAAVIALANHCANLVTVDLRDCRNLTDAAVIALATHCA 64 
                 56778899999**************9999988777776665 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.034
   PF04528.8  74 gllnnlvvlvCksCaelseisvrcCar 100
                  l++  v+ + ++Ca+l  i+++ C  
  MMETSP1325-20131115|5035_1  50 NLTDAAVIALATHCANLVTIHLNGCDI 76 
                 5677889999999*****999999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|5036_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 378.09
//
Query:       MMETSP1325-20131115|5038_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   12.3   0.0       0.19   11.7   0.0    1.3  1  PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00441.19  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.4e-05      0.19       1      26 [.      75     100 ..      75     101 .] 0.92

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.4e-05
                 ---...-HHHHHHHHHH--------H CS
  PF00441.19   1 gkGfavametlnheRlliaaaalgla 26 
                 +kGf+++m+ l  eRl iaa + + a
  MMETSP1325-20131115|5038_1  75 NKGFYYLMNELPQERLQIAAECQARA 100
                 79******************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|5031_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-61  205.5   4.2    9.7e-60  202.0   2.9    2.0  1  PF00112.18 Papain family cysteine protease
      4e-05   22.2   0.8      0.022   13.2   0.0    2.3  2  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.0   2.9   1.4e-63   9.7e-60       2     217 ..      73     321 ..      72     324 .. 0.90

  Alignments for each domain:
  == domain 1    score: 202.0 bits;  conditional E-value: 1.4e-63
                 TSB--CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-TTTS-TT----HHHHHHHHHHC---BBTTTS---SSC-.......S--CCCC--C.......CCCECEEEEEESS..-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE-..........................-BSSTCC-TTG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEE CS
  PF00112.18   2 pesvDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCskeenegCnGGlmenafeyikknggivtekdypYkakeg......gkCkkkkkkek......evakikgygkvken..seealkkalakngPvsvaidaseedfqlYksG..........................vyketecsstelnhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseav 217
                 p+++Dwre  gav++vk+q+ CGsCW+fs+++ +eg ++++t ++l+s+Seq+lv C++  n gC+GG+m  a++y+ + g +v+ + ypYk+         ++C+++  ++k      ++a+i+g+++v      e+ +++ + kngP+s+ai+a+ +   +Y +G                           +++ +c++t+l+h+vl+v yg+++g++yW++kNSW ++wGe+GY+ri+rg+n +cg+++ a+
  MMETSP1325-20131115|5031_1  73 PTNFDWREL-GAVSSVKNQKYCGSCWTFSTAQDIEGTHFLAT-GNLTSMSEQQLVACDT-YNYGCDGGWMFAAMQYVADFGVMVSAEAYPYKGVMMtydlptPSCDTDLLNSKmesdgdNIAHIEGFQMVGMGaeYEDLMATYMLKNGPLSIAINANGM--DYYVHGivgcetiagaeyceagvidapsdgstTMEH-TCNPTDLDHGVLLVAYGEQDGVDYWVIKNSWAETWGEDGYYRIERGVN-KCGVANFAS 321
                 99******7.5*******************************.7**************8.89*****************8888999******776667888888887733333346667789999999987776567788899999************6..89********************99999999855555.9*********************************************99.*****9887 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.1   0.00015         1      57      74 ..      86     103 ..      68     151 .. 0.90
   2 !   13.2   0.0   3.2e-06     0.022     358     397 ..     270     307 ..     252     311 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00015
  PF03051.10  57 evtnqkqsGRCWlFaaln 74 
                 +v nqk  G CW F++  
  MMETSP1325-20131115|5031_1  86 SVKNQKYCGSCWTFSTAQ 103
                 799************965 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 3.2e-06
  PF03051.10 358 lmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfvm 397
                  ++H ++l++  +  ++ v  w + nsW e  Ge+Gy+ +
  MMETSP1325-20131115|5031_1 270 DLDHGVLLVAYGE--QDGVDYWVIKNSWAETWGEDGYYRI 307
                 5789999999988..778999****************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.63
# Mc/sec: 1247.63
//
Query:       MMETSP1325-20131115|5037_1  [L=512]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1727  (0.126317); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.19u 0.39s 00:00:01.58 Elapsed: 00:00:00.70
# Mc/sec: 1752.76
//
Query:       MMETSP1325-20131115|5039_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.31s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 790.80
//
Query:       MMETSP1325-20131115|5041_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-11   43.1   0.1    5.1e-11   42.0   0.0    1.6  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   0.0   3.7e-15   5.1e-11       1      44 [.      74     114 ..      74     119 .. 0.89

  Alignments for each domain:
  == domain 1    score: 42.0 bits;  conditional E-value: 3.7e-15
                 HHHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHH CS
  PF00226.26   1 dyYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekf 44 
                 d+Y  L+v ++a+++eIk  Yrkl+lk+HPDk+ +d    +e f
  MMETSP1325-20131115|5041_1  74 DHYLALKVAQTATAKEIKLGYRKLSLKFHPDKSGGDT---AELF 114
                 89******************************99988...4555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 611.84
//
Query:       MMETSP1325-20131115|5044_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|5046_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|5043_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-05   24.4   0.0    3.3e-05   23.8   0.0    1.3  1  PF13499.1  EF-hand domain pair
     0.0002   20.8   0.1    0.00039   19.9   0.0    1.4  1  PF13405.1  EF-hand domain
    0.00066   18.7   0.0     0.0012   17.9   0.0    1.4  1  PF00036.27 EF hand
     0.0042   17.2   8.5     0.0042   17.2   5.9    1.4  2  PF01769.11 Divalent cation transporter
     0.0043   16.0   2.8     0.0053   15.7   1.9    1.1  1  PF05231.9  MASE1
  ------ inclusion threshold ------
      0.038   13.2   0.0      0.067   12.4   0.0    1.4  1  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   1.5e-08   3.3e-05       2      45 ..     134     177 ..     124     180 .] 0.89

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 1.5e-08
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyi 45 
                 ++  F  +D+d++g l+k+e++rl++++g  ++ +e++ ++ ++
  MMETSP1325-20131115|5043_1 134 MRSFFAHYDSDHSGGLEKQEFTRLIRGFGVTMTASESESLIAEL 177
                 5668999************************9999999887665 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.7e-07   0.00039       1      27 [.     133     159 ..     133     165 .. 0.92

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.7e-07
                 HHH---GCC-------B---HHHHHHH CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrdaLr 27 
                 ++r++F ++D d++G ++++E+ +++r
  MMETSP1325-20131115|5043_1 133 KMRSFFAHYDSDHSGGLEKQEFTRLIR 159
                 59**********************998 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   5.1e-07    0.0012       2      27 ..     134     159 ..     133     161 .. 0.90

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 5.1e-07
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 ++ +F+++D D++G ++++Ef ++++
  MMETSP1325-20131115|5043_1 134 MRSFFAHYDSDHSGGLEKQEFTRLIR 159
                 5789*****************99987 PP

>> PF01769.11  Divalent cation transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   5.9   1.8e-06    0.0042      65     133 ..      20      87 ..      13      90 .. 0.85
   2 ?   -3.3   0.0       3.9   8.9e+03       7      26 ..     144     163 ..     143     174 .. 0.70

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.8e-06
  PF01769.11  65 allvvelegvatllaivvavalvvslvlatilavlipillkklglDPdnvagPliTtlaDivgllilll 133
                 ++ +v l g+++  +i +av+l+v ++++ ++++ +p++l+ + +DP+ +++ +i  + Di+g+li+ +
  MMETSP1325-20131115|5043_1  20 GFVRVLLFGTDLGECIAIAVSLYVVVLTSILIGAALPLMLNAVSIDPAHAST-TIQVIMDIMGVLIVCV 87 
                 45555666777888999*******************************9999.899*********9854 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 3.9
  PF01769.11   7 glaGNvgaqlasrlsrklal 26 
                 + +G ++ q  +rl+r+  +
  MMETSP1325-20131115|5043_1 144 DHSGGLEKQEFTRLIRGFGV 163
                 56777788888888887654 PP

>> PF05231.9  MASE1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   1.9   2.3e-06    0.0053     102     177 ..      15     102 ..       2     116 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.3e-06
   PF05231.9 102 rletl............dvllflvaaaliaalllaiiglalllllgllplasfseswltwwlgsatGvlvlaPlllllrrylrqrhrl 177
                 ++ t+              +++++  + ++ l++ +ig+al l+l++++ ++  +s+ + ++ +++Gvl++  +  ++ +  + +++l
  MMETSP1325-20131115|5043_1  15 TVTTVgfvrvllfgtdlGECIAIAVSLYVVVLTSILIGAALPLMLNAVSIDPAHASTTIQVIMDIMGVLIVCVVSAVVLEGGWLPQWL 102
                 55555555555555555456788888999999******************************************************98 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.9e-05     0.067       1      24 [.     134     157 ..     134     158 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.9e-05
                 HHHHHHHH--S----B-HHHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkrl 24 
                 ++++F  +D + +G + ++E+ rl
  MMETSP1325-20131115|5043_1 134 MRSFFAHYDSDHSGGLEKQEFTRL 157
                 5789*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       562  (0.0411059); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.67
# Mc/sec: 643.80
//
Query:       MMETSP1325-20131115|5047_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.9    7.2  10.7        1.9    7.2   7.4    1.0  1  PF13971.1 Microtubule-binding domain of katanin
        3.3    7.6  28.0        4.4    7.2  19.4    1.2  1  PF13892.1 DNA-binding domain


Domain annotation for each model (and alignments):
>> PF13971.1  Microtubule-binding domain of katanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   7.4   0.00028       1.9      39     107 ..      16      91 ..      12     109 .] 0.83

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00028
   PF13971.1  39 areyteaLakklkeedegwkkkaeeLeaevlqlrqel.......Lesrllagkaksgkkelikklldqdktksend 107
                  r+  e+L+ k  ++ ++++ k ++L ae ++ r+ +       L sr++a ka+  +++  k+ ++ +   + + 
  MMETSP1325-20131115|5047_1  16 GRNQKEHLRRKNAQQRQKELEKRKKLDAEEKEARERVeketkdwLDSRIVARKAAREEAKAAKEAEAAAAHAERER 91 
                 5777899************************************************998888887777666555544 PP

>> PF13892.1  DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  19.4   0.00064       4.4       8     107 ..       8     107 ..       2     109 .] 0.78

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00064
   PF13892.1   8 qrkiwkdivrkdipkvarivaqlkqkklsnakklaqlcarearrkqsksqkivkdiqlrakrlvremllfwkknekeere.lrkkaekeaaeqakkeeeer 107
                  r i  ++ r + + + r +++++++k  + +k  ++ ++ear++ +k +k   d  + a++++re +   k  e   ++  r + eke + ++k+ ee +
  MMETSP1325-20131115|5047_1   8 NRDIMDQLGR-NQKEHLRRKNAQQRQKELEKRKKLDAEEKEARERVEKETKDWLDSRIVARKAAREEAKAAKEAEAAAAHaERERREKERMAKRKHAEESK 107
                 5566666677.5555555555555555555566667889************************************98765157799*********999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2213  (0.161864); expected 273.4 (0.02)
Passed bias filter:                      768  (0.0561732); expected 273.4 (0.02)
Passed Vit filter:                       136  (0.00994734); expected 13.7 (0.001)
Passed Fwd filter:                        42  (0.00307197); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.46s 00:00:01.24 Elapsed: 00:00:00.64
# Mc/sec: 408.13
//
Query:       MMETSP1325-20131115|5048_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|5049_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 275.14
//
Query:       MMETSP1325-20131115|5040_1  [L=319]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-44  151.1   0.1    2.8e-44  150.8   0.1    1.1  1  PF00149.23 Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.8   0.1   2.1e-48   2.8e-44       2     200 ..      49     242 ..      48     243 .. 0.99

  Alignments for each domain:
  == domain 1    score: 150.8 bits;  conditional E-value: 2.1e-48
                 EEEEEEEBTBBHHHHHHHHHHHHHHHHHTTTSEEEEE-TTSSGHHCHHHHHHHHHHCCHHHHTTSCEEEE---TTTHHHHHHHHHSTTHHHHCHSTCSSTCCCEESTEEEEETTEEEEEEETTSHCSTCHHHHHHHHHHHHHHCCEEESEEEEEESSSSCHHHCTTTTH.....................................SCCHHHHHHHHHHHHTTSSEEEE-SSSS CS
  PF00149.23   2 rilvigDlHgglddleglllilleiaaeekpdlvlflGDlvdrgdwssetlalldylvlklllpipvfllrGNHEsdpgnsaygflkeqakdprglanaeeeyeelsitllttsgelgglsglypllggeiqeeqleeflalplralvdgkilltHgplsssggssddi...................................gggelfgpdalekllekygvdlvlrGHeHv 200
                 +i ++gD+Hg+++dl    l+l+e ++ ++  ++lflGD+vdrg++s et++ll  l++k+++p ++f+lrGNHE+ ++n+ ygf++e+                                    +++ + ++ + ++f++lp +a+vd ki ++Hg+ls+++   ++i                                   g+++ fg+d ++ +l+++++dl++r+H+ v
  MMETSP1325-20131115|5040_1  49 PIKICGDIHGQYYDL----LRLFEYGGFPPEANYLFLGDYVDRGKQSMETICLL--LAYKIKYPENFFILRGNHECASINRIYGFYDECK----------------------------------RRYNIKLWKTFIDCFNCLPVAAIVDEKIMCMHGGLSPELSQMEQIkrimrptdvpdtgllcdllwsdpdkdivgwgendrGVSFTFGEDIVAQFLRRHDLDLICRAHQVV 242
                 799************....***********************************..*********************************9..................................699********************************************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 1341.12
//
Query:       MMETSP1325-20131115|5050_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        57  (0.0041691); expected 273.4 (0.02)
Passed bias filter:                       53  (0.00387654); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 244.07
//
Query:       MMETSP1325-20131115|5052_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-14   52.8   0.0    3.5e-14   52.6   0.0    1.0  1  PF02880.11 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III


Domain annotation for each model (and alignments):
>> PF02880.11  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   2.6e-18   3.5e-14       1      70 [.      14      90 ..      14      92 .] 0.86

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 2.6e-18
                HHHHHHHHHHCHHHC....H.--.-EEEETTS-CHHHHHHHH----EEEE----CCG--TTT-.-..-S-B--TT-- CS
  PF02880.11  1 dgdqllallakylle....kpga.kvvktvmtslalervakklgvklvetkvGdkyvkekmreeg..avlGgEeSgh 70
                +gd++++l+a+   +    ++g  +v+++++ts+al+ va++l+  ++et++G+k+++++m+  +    ++gEeS +
  MMETSP1325-20131115|5052_1 14 PGDSVAILAANGKDAipefAGGIqGVARSMPTSRALDVVAEALDFSFFETPTGWKFFGNLMDCDQytPFICGEESFG 90
                69********976556666445558*************************************9984448******54 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.60
# Mc/sec: 367.44
//
Query:       MMETSP1325-20131115|5052_2  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.44s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 449.93
//
Query:       MMETSP1325-20131115|5053_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.64    9.8   3.8       0.94    9.2   2.7    1.4  1  PF04212.13 MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.7   6.9e-05      0.94      10      42 ..      20      52 ..      15      82 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 6.9e-05
                HHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHC CS
  PF04212.13 10 kkAveaDeagkyeeAlelYkeAlelLlqalkye 42
                k+A+ea+ +g+ ++A  lY  A++ ++  ++ +
  MMETSP1325-20131115|5053_1 20 KMAIEAESKGERAAAAALYLRAADTYELRMALD 52
                89*********************9887666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 501.88
//
Query:       MMETSP1325-20131115|5054_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|5057_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 192.65
//
Query:       MMETSP1325-20131115|5057_2  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|5055_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        88  (0.00643651); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.32s 00:00:00.61 Elapsed: 00:00:00.52
# Mc/sec: 161.29
//
Query:       MMETSP1325-20131115|5056_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.73
# Mc/sec: 305.29
//
Query:       MMETSP1325-20131115|5060_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-06   26.2   0.1    3.9e-05   23.6   0.0    2.1  2  PF01713.16 Smr domain
     0.0027   17.5   0.0     0.0058   16.4   0.0    1.5  1  PF13041.1  PPR repeat family
  ------ inclusion threshold ------
      0.013   15.6   0.1        1.4    9.2   0.0    2.6  2  PF13812.1  Pentatricopeptide repeat domain


Domain annotation for each model (and alignments):
>> PF01713.16  Smr domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   8.5e-09   3.9e-05       1      64 [.      72     145 ..      72     158 .. 0.86
   2 ?    0.1   0.0      0.18   8.4e+02      70      81 ..     169     180 ..     157     182 .. 0.81

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 8.5e-09
                 EE-----HHHHHHHHHHHHHHHHHHHH......-EEEEE----....---....HHHHHHHHHHTTHCECCEEE CS
  PF01713.16   1 lDLHgltveeAlealeefldrarskgl......rtvliitGkGshseggv....LkkavkewLdesrkaeevsa 64 
                 lDLH+ t++ A+ a++ +   + ++          ++iitG G+h +gg+    + ++++ +L+    ++ v+a
  MMETSP1325-20131115|5060_1  72 LDLHHSTLAVARVATRHACTVLAARPDdggcnrGGLTIITGIGHHTPGGTqnavIPQEIRAFLSADLAYPPVQA 145
                 8***************99999998888889**99***************88999*********76666666554 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.18
                 --------EEEE CS
  PF01713.16  70 prhGgsGalyVl 81 
                 + +G++G +yV 
  MMETSP1325-20131115|5060_1 169 EVEGNAGRVYVS 180
                 4589******97 PP

>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.3e-06    0.0058      13      48 ..       5      40 ..       2      41 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.3e-06
   PF13041.1 13 lckkgkveeAfklfneMkkrgikPnvyTYsilikgl 48
                +  +g+ + A+++++ M   g++Pn + Y  +i +l
  MMETSP1325-20131115|5060_1  5 CKGAGRGDRALEILQMMSHHGVEPNGHCYDNVIGAL 40
                4448999***********************999886 PP

>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00031       1.4      12      34 .]       5      28 ..       1      28 [. 0.85
   2 ?    3.9   0.0     0.016        72       2      26 ..      31      56 ..      30      62 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00031
   PF13812.1 12 ak.sgrpeaAlalleeMeqqgvkP 34
                +k +gr ++Al++l +M  +gv+P
  MMETSP1325-20131115|5060_1  5 CKgAGRGDRALEILQMMSHHGVEP 28
                44499*****************99 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.016
   PF13812.1  2 etyntlitala.ksgrpeaAlallee 26
                ++y+ +i al  ++ ++++A++++++
  MMETSP1325-20131115|5060_1 31 HCYDNVIGALEaSRSDWALAERVYRQ 56
                5799999999845777999***9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 832.19
//
Query:       MMETSP1325-20131115|5062_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-07   30.1   0.0     0.0042   16.8   0.0    2.5  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.1e-07    0.0042       4      39 .]      14      50 ..      11      50 .. 0.90
   2 !   10.9   0.0   2.2e-05       0.3      10      39 .]      69     102 ..      63     102 .. 0.93

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.1e-07
                EEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  4 katlrgHtspVtcvafspd.gpllasgSrDgtirlWd 39
                  t  +H+s   cva++p+ ++l+a gS +g + l+d
  MMETSP1325-20131115|5062_1 14 PETTIEHSSCLMCVACHPEqPSLVAAGSFNGEVLLFD 50
                567889*************************999887 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 2.2e-05
                 SSSSEEEEEEESS....STEEEEEETTSEEEEEE CS
  PF00400.27  10 HtspVtcvafspd....gpllasgSrDgtirlWd 39 
                 H  pV  +++  d      ll s S+Dg++  W+
  MMETSP1325-20131115|5062_1  69 HREPVAQLRWVYDpnalDYLLSSVSSDGKVLFWS 102
                 9999999**************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.60
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|5063_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.56
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|5064_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-21   76.0   0.3    2.7e-21   75.7   0.2    1.1  1  PF02544.11 3-oxo-5-alpha-steroid 4-dehydrogenase


Domain annotation for each model (and alignments):
>> PF02544.11  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.7   0.2     2e-25   2.7e-21      79     140 ..       2      63 ..       1      65 [. 0.97

  Alignments for each domain:
  == domain 1    score: 75.7 bits;  conditional E-value: 2e-25
  PF02544.11  79 gglFelvsapnyfgEilewigyalvtkslaalaFalftvlnltvraaahhkwykkkfekYpk 140
                 gglFelvs +n+ gEi+ew g+a++ +s+a+++Fa+ft+ln ++r aahhkwy+ kf++Y +
  MMETSP1325-20131115|5064_1   2 GGLFELVSGANFCGEIIEWTGFAIAGWSVASFTFAIFTFLNTAPRGAAHHKWYLSKFDDYXE 63 
                 99**********************************************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.29s 00:00:00.67 Elapsed: 00:00:00.67
# Mc/sec: 382.70
//
Query:       MMETSP1325-20131115|5066_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|5068_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.51
# Mc/sec: 230.24
//
Query:       MMETSP1325-20131115|5070_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-10   39.5  13.4    5.7e-10   38.8   9.3    1.3  1  PF01363.16 FYVE zinc finger


Domain annotation for each model (and alignments):
>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   9.3   4.2e-14   5.7e-10       2      64 ..     142     212 ..     141     216 .. 0.87

  Alignments for each domain:
  == domain 1    score: 38.8 bits;  conditional E-value: 4.2e-14
  PF01363.16   2 kwvpdaeakkCeiCakkFsl..........trrrhhCrlCGkvvCskCsskrvekleeeaaeekevrvCkeCl 64 
                 +w + ++++ C++C++ F++               hC+ CG v+C++Cs++  +++  e a  ++vrvC++C+
  MMETSP1325-20131115|5070_1 142 PWTSFTACDVCMSCKHDFTWastsssaaqrCLDMFHCHSCGGVFCNSCSQHERAMP--ELAMVTPVRVCDACY 212
                 6999999***********97777776654456679******************888..999***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       641  (0.0468841); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 1042.86
//
Query:       MMETSP1325-20131115|5071_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-12   46.2   0.0    6.5e-12   45.6   0.0    1.3  1  PF08241.7  Methyltransferase domain
    1.8e-11   43.7   0.0    2.1e-11   43.5   0.0    1.1  1  PF13847.1  Methyltransferase domain
    6.9e-08   32.9   0.0    1.1e-07   32.3   0.0    1.2  1  PF12847.2  Methyltransferase domain
      2e-06   28.0   0.1      4e-06   26.9   0.0    1.6  1  PF13649.1  Methyltransferase domain
    4.9e-06   26.4   0.0    6.8e-06   25.9   0.0    1.2  1  PF13659.1  Methyltransferase domain
    2.7e-05   24.4   0.0    4.6e-05   23.7   0.0    1.4  1  PF08242.7  Methyltransferase domain
    9.6e-05   21.7   0.0    0.00013   21.2   0.0    1.1  1  PF05175.9  Methyltransferase small domain
     0.0079   15.4   0.0       0.01   15.1   0.0    1.2  1  PF05401.6  Nodulation protein S (NodS)
  ------ inclusion threshold ------
      0.013   14.8   0.0      0.026   13.8   0.0    1.7  1  PF05724.6  Thiopurine S-methyltransferase (TPMT)
      0.077   11.8   0.0       0.14   10.9   0.0    1.5  1  PF07942.7  N2227-like protein
       0.09   11.4   0.0       0.12   11.1   0.0    1.1  1  PF00316.15 Fructose-1-6-bisphosphatase
        0.1   11.5   0.0       0.16   10.9   0.0    1.4  1  PF01209.13 ubiE/COQ5 methyltransferase family


Domain annotation for each model (and alignments):
>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.0   5.7e-15   6.5e-12       3      95 .]      52     152 ..      50     152 .. 0.92

  Alignments for each domain:
  == domain 1    score: 45.6 bits;  conditional E-value: 5.7e-15
   PF08241.7   3 vGcGtglllealaerpaarvtgvDlseemlatakerlkeegle.lvvadaeelpfednsfDvvvssevlehl.......edpekalkeiaRvLkpgGllvi 95 
                  GcG+ +l + l +  + ++t++D+s+ +++++ +r+++++ + + v+d++++  +d+ fD+++  +++          + + ++++e +RvLkpgG+ ++
  MMETSP1325-20131115|5071_1  52 PGCGNSRLGAELYDFGFVNLTCIDTSPVVINQMSDRYADKEEMeFTVMDVRRMEIPDACFDLIIDKALFDAQlcgednlNFVTEMVAETCRVLKPGGMYIC 152
                 6*********************************9999988778*********************999966667977778889999999********9886 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.0   1.8e-14   2.1e-11       4     112 ..      46     156 ..      43     191 .. 0.88

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 1.8e-14
   PF13847.1   4 gikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfenveFiqgdieeleklle.esfDlvisnevl.......naladpqkvlkeiervlkpggrlivesps 112
                 + ++l  GCG+ +l+ el++  g   ++++iD s+  i+ +  r      e++eF + d+  +e  ++ + fDl+i+++++       ++l++  +++ e +rvlkpgg +i+ s+ 
  MMETSP1325-20131115|5071_1  46 NFEILIPGCGNSRLGAELYD-FGF-VNLTCIDTSPVVINQMSDR--YADKEEMEFTVMDVRRME--IPdACFDLIIDKALFdaqlcgeDNLNFVTEMVAETCRVLKPGGMYICISHG 156
                 5567778************4.333.67****************6..778889************..9***********88899999**99***********************9987 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   9.3e-11   1.1e-07       9     109 ..      53     152 ..      47     155 .. 0.85

  Alignments for each domain:
  == domain 1    score: 32.3 bits;  conditional E-value: 9.3e-11
   PF12847.2   9 GcGtGslslelarlrpgakvvgvDpseeslelarenaksldleeriellqgdakeelsller.fDavllkg.l....tldallaldeprrvlealpkllkpggrlvi 109
                 GcG+ +l++el + ++  +++ +D s+  ++++ ++    +  e++e+   d+ ++ ++ ++ fD++++k  +    +++++l    +++++++  + lkpgg ++ 
  MMETSP1325-20131115|5071_1  53 GCGNSRLGAELYD-FGFVNLTCIDTSPVVINQMSDRY---ADKEEMEFTVMDV-RRMEIPDAcFDLIIDKAlFdaqlCGEDNLNF--VTEMVAETCRVLKPGGMYIC 152
                 9************.79999******************...567999*******.666666666********77888877777777..777788888*******8875 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   3.5e-09     4e-06       4     101 .]      52     148 ..      49     148 .. 0.79

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 3.5e-09
   PF13649.1   4 lGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskglkvkfvqadaralpfeegefdlvvcaglsle.......hlspkqlealleeiarvlkpgG 101
                  GCG+ r +++l++    g   +++++D s+  +++   r+++k+ +++f ++d+r ++ +++ fdl++   l ++        l+     ++++e++rvlkpgG
  MMETSP1325-20131115|5071_1  52 PGCGNSRLGAELYDF---GF-VNLTCIDTSPVVINQMSDRYADKE-EMEFTVMDVRRMEIPDACFDLIIDKAL-FDaqlcgedNLN-F-VTEMVAETCRVLKPGG 148
                 69***********87...66.********************9998.*************99999999998444.552222221222.2.3456788889999998 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0     6e-09   6.8e-06       3     115 ..      48     154 ..      46     156 .. 0.90

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 6e-09
   PF13659.1   3 rvldpgcGsGtfllaalellaalllgvEldpraaalaarnlaraglaervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrdlydafleaaarllkpgGvlvliv 115
                  +l pgcG+  + + +++ +  +l++++ +p  ++  + ++a +   e++++++ d+r+++  +++++fdl++    +  +    +++ + +++ +++ +r+lkpgG+  +i+
  MMETSP1325-20131115|5071_1  48 EILIPGCGNSRLGAELYDFGFVNLTCIDTSPVVINQMSDRYADK---EEMEFTVMDVRRME--IPDACFDLIIDKALFDAQ-LCGEDNLNFVTEMVAETCRVLKPGGMYICIS 154
                 6899****************9************99888888765...789**********9..***************865.45567778999***************99997 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0     4e-08   4.6e-05       4      98 ..      53     149 ..      50     150 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 4e-08
   PF08242.7   4 GcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl.......kdirevldnirklLkpgGv 98 
                 GcG+++l  +l +    +++t++D sp +i++   + a++e+  ++ +++++ ++ d      fD+++   ++ +        + ++e++++  ++LkpgG+
  MMETSP1325-20131115|5071_1  53 GCGNSRLGAELYDF-GFVNLTCIDTSPVVINQMSDRYADKEEMEFTVMDVRRMEIPDA----CFDLIIDKALFDAQlcgednlNFVTEMVAETCRVLKPGGM 149
                 9*********9776.9**************************************9887....9**********9999999665555577778889*****97 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.2e-07   0.00013      23     141 ..      37     154 ..      28     168 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.2e-07
                 HHHHS-TT------B-------HHHHHHHH-TT----EEESBHHHHHHHHHHHHH----.--EEE-STTT.T--.--BS-EEE--------..HHHHHHHHHHH---GGGB-----EEEEEE CS
   PF05175.9  23 LletlpkklagkvlDlGcGaGvlgaalakespelevtlvDinarAvesakanleanklenvevlasdlle.eveekkfdlivsNPPfhagk..atelevaerliaeAkkhLkegGeLllVan 141
                 Ll +l+++++ ++l  GcG+  lga+l + +   ++t++D +   ++     +++++   +e++  d+   e++++ fdli+    f a+   + +l+ +++++ae  ++Lk+gG  +++ +
  MMETSP1325-20131115|5071_1  37 LLPYLQNHQNFEILIPGCGNSRLGAELYDFGFV-NLTCIDTSPVVINQMSDRYADKEE--MEFTVMDVRRmEIPDACFDLIIDKALFDAQLcgEDNLNFVTEMVAETCRVLKPGGMYICI-S 154
                 8899999999999*9************998876.8***********998888887774..578888887525668***************9888899******************88655.4 PP

>> PF05401.6  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   9.1e-06      0.01      51     112 ..      53     116 ..      37     156 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 9.1e-06
                 ------HHHHHGGGB.SSEEEEES-TTT---HHHHTTT-SSEEEEES-TTT---.SS-BS-EEE CS
   PF05401.6  51 GcaaGafteklapyc.krltvidvvpeaierarervkksshisWvvsdvqqfst.eekfdlivv 112
                 Gc    +  +l  +   +lt id  p  i++   r  ++ ++ ++v dv++++  ++ fdli+ 
  MMETSP1325-20131115|5071_1  53 GCGNSRLGAELYDFGfVNLTCIDTSPVVINQMSDRYADKEEMEFTVMDVRRMEIpDACFDLIID 116
                 555555555554443157**********************************963789***984 PP

>> PF05724.6  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   2.3e-05     0.026       3      81 ..       9      90 ..       7     181 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2.3e-05
                ----HHHHHTT-.-TT--SSSTHHHH.HHHHCHT-S---EEE-TT----HHHHHH-BTT.BEEE---S-HHHHHHHHHH--- CS
   PF05724.6  3 edfWekrweeeq.ipfhqeevnpllk.kfldalkakaglrvlvPlCGkaldlvwlAeqg.revvGvelselAvekffeeanl 81
                e+ W++r++++   +f+  +    l+ ++l+ l+++++  +l+P+CG++   + l + g  ++  ++ s+  ++++ + +  
  MMETSP1325-20131115|5071_1  9 EAYWDERYAAQDgSNFDWYQDFGTLRpHLLPYLQNHQNFEILIPGCGNSRLGAELYDFGfVNLTCIDTSPVVINQMSDRYAD 90
                678999998753255665555555551555669999999********99766666666623566677777777776555444 PP

>> PF07942.7  N2227-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00012      0.14      52      81 ..      40      69 ..       3      78 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00012
   PF07942.7 52 eskerekvkilvPGaGlGrlavelatkgyq 81
                  +++++ +il+PG+G  rl  el   g++
  MMETSP1325-20131115|5071_1 40 YLQNHQNFEILIPGCGNSRLGAELYDFGFV 69
                5678899****************9988875 PP

>> PF00316.15  Fructose-1-6-bisphosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0    0.0001      0.12     194     258 ..      91     155 ..      74     166 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.0001
  PF00316.15 194 eegkifsinegnarkwdkavrkyidklkeekegsrkkyslRyigslVadvhrillkgGiflypgd 258
                 +e+ +f++ + ++++ + a  ++i +    + + + + +l ++  +Va++ r+l  gG+++ ++ 
  MMETSP1325-20131115|5071_1  91 KEEMEFTVMDVRRMEIPDACFDLIIDKALFDAQLCGEDNLNFVTEMVAETCRVLKPGGMYICISH 155
                 677888898899999888888877665555677778999*********************97765 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00014      0.16      98     156 ..      92     157 ..      54     177 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00014
  PF01209.13  98 inieflqanaeeLpfeddsfDvvt..vsf.....GlrnvtDklkaLkeayrvlkpGGrlvvlefsk 156
                  ++ef + +  +++  d  fD++     f     G  n+   ++ + e  rvlkpGG  +++    
  MMETSP1325-20131115|5071_1  92 EEMEFTVMDVRRMEIPDACFDLIIdkALFdaqlcGEDNLNFVTEMVAETCRVLKPGGMYICISHGL 157
                 3555666666666666666665531111211122566777788889999************97654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 935.94
//
Query:       MMETSP1325-20131115|5074_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 422.89
//
Query:       MMETSP1325-20131115|5075_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 253.73
//
Query:       MMETSP1325-20131115|5076_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 574.13
//
Query:       MMETSP1325-20131115|5072_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 183.55
//
Query:       MMETSP1325-20131115|5077_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00059   19.4   0.0     0.0013   18.2   0.0    1.5  1  PF00226.26 DnaJ domain
  ------ inclusion threshold ------
       0.15   11.9   2.1       0.23   11.3   1.5    1.2  1  PF13025.1  Protein of unknown function (DUF3886)
        1.3    7.1   4.1        1.6    6.8   2.8    1.0  1  PF09726.4  Transmembrane protein


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.9e-07    0.0013       7      37 ..      89     119 ..      87     129 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 2.9e-07
                 T--TT--HHHHHHHHHHHHHHT-TTT--SCC CS
  PF00226.26   7 gvpkdasdeeIkkaYrklalkyHPDknkdde 37 
                  ++++ + +e+kk Y k ++  HPDk ++++
  MMETSP1325-20131115|5077_1  89 TLTESPTPAEVKKGYMKAVRVIHPDKLSGKA 119
                 566777899*****************99987 PP

>> PF13025.1  Protein of unknown function (DUF3886)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.5   4.9e-05      0.23      15      58 ..      12      59 ..      10      66 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4.9e-05
   PF13025.1 15 nedllakLkakkkeLkeeeekrkeeeearkreerkerek....nksfe 58
                 +d+ a+ +a k+ + e+ ++r++e  a+k  e+   e+     k++e
  MMETSP1325-20131115|5077_1 12 AADIEARIRAEKDAMDEAIQRRRAEMDAKKAAEQASSERadviTKDLE 59
                58999*****************************99999655555555 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   2.8   0.00035       1.6     499     538 ..      13      52 ..       6      65 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00035
   PF09726.4 499 eerearvsvekqLaeekkrkkeeeetaaravalaaasree 538
                 ++ ear  +ek   +e  +++++e  a++a+ +a ++r +
  MMETSP1325-20131115|5077_1  13 ADIEARIRAEKDAMDEAIQRRRAEMDAKKAAEQASSERAD 52 
                 67799*************************9998887763 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       701  (0.0512727); expected 273.4 (0.02)
Passed bias filter:                      504  (0.0368637); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 655.33
//
Query:       MMETSP1325-20131115|5079_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 252.71
//
Query:       MMETSP1325-20131115|5082_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.005   16.7   2.1     0.0059   16.5   1.5    1.1  1  PF08810.5 Kinase associated protein B
  ------ inclusion threshold ------
       0.38   10.5   4.4       0.51   10.1   2.9    1.5  1  PF06103.6 Bacterial protein of unknown function (DUF948)
       0.52    9.8   3.0       0.62    9.6   1.0    1.7  2  PF04895.7 Archaeal protein of unknown function (DUF651)
       0.57   10.2   8.8       0.75    9.8   6.1    1.2  1  PF05837.7 Centromere protein H (CENP-H)
        6.9    6.2   9.1        8.7    5.9   5.1    1.8  2  PF12938.2 M domain of GW182


Domain annotation for each model (and alignments):
>> PF08810.5  Kinase associated protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   1.5   2.1e-06    0.0059      51     107 ..      20      76 ..       8      81 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.1e-06
   PF08810.5  51 LsykektnvkksavkeyevevpdYeesLkqalekleeklkednsefakksLenleel 107
                 L ++e +++++++vk+ +++ ++ +  ++ a++k++  l++d s++++  +++ + +
  MMETSP1325-20131115|5082_1  20 LMKQELKYIEEETVKSMQEQQVELHRDMQDAMAKQQMTLRQDISKWSNSVVKQQHVV 76 
                 788999*****************************************9988876655 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.9   0.00019      0.51      20      74 ..       3      58 ..       1      75 [. 0.78

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00019
   PF06103.6 20 tlkklkktldevnktvkkltkqvdgitketeellaktn.elleDvneKvetldpvf 74
                +l+ ++++++e ++ ++ +++++++i +et + +++++ el  D+++ +++ + + 
  MMETSP1325-20131115|5082_1  3 MLSTVQEAIAEQQAGTRLMKQELKYIEEETVKSMQEQQvELHRDMQDAMAKQQMTL 58
                67889999999999999999999999999998888765379999999888766544 PP

>> PF04895.7  Archaeal protein of unknown function (DUF651)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.049   1.3e+02      58      84 ..       6      32 ..       3      36 .. 0.84
   2 ?    9.6   1.0   0.00023      0.62      57      95 ..      31      69 ..      26      82 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.049
   PF04895.7 58 tvrealkskpakfetleealeavsekl 84
                tv+ea+++++a +  ++++l++++e++
  MMETSP1325-20131115|5082_1  6 TVQEAIAEQQAGTRLMKQELKYIEEET 32
                789999999999999999999999875 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00023
   PF04895.7 57 etvrealkskpakfetleealeavseklkvslkewlkks 95
                etv+++ +++ +   ++++a+ + + +l+ ++++w ++ 
  MMETSP1325-20131115|5082_1 31 ETVKSMQEQQVELHRDMQDAMAKQQMTLRQDISKWSNSV 69
                89*********************************8753 PP

>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   6.1   0.00027      0.75       2      67 ..       8      69 ..       7      82 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00027
   PF05837.7  2 sseilnlqqasretreeLsdvekerl.qlkqknrelvrellelkkkkesdredeelkeklekleael 67
                +++i+++q  +r +++eL+ +e+e   +++++++el r ++++++k++   +     + ++k  + +
  MMETSP1325-20131115|5082_1  8 QEAIAEQQAGTRLMKQELKYIEEETVkSMQEQQVELHRDMQDAMAKQQMTLR-----QDISKWSNSV 69
                68999****************9998526888999********9999987766.....6666654443 PP

>> PF12938.2  M domain of GW182
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.3      0.19   5.3e+02     194     206 ..       4      16 ..       3      26 .. 0.87
   2 ?    5.9   5.1    0.0032       8.7     152     207 ..      21      75 ..      14      82 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.19
   PF12938.2 194 isqlqnqiaaqqa 206
                 +s++q+ ia+qqa
  MMETSP1325-20131115|5082_1   4 LSTVQEAIAEQQA 16 
                 6899*****9998 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0032
   PF12938.2 152 LnqLLsqik.....qLqqaqqsLqrkgnavrveevqlnveinklkqqisqlqnqiaaqqal 207
                 ++q L+ i       +q +q +L+r ++       +++ +   l+q+is+  n++  qq +
  MMETSP1325-20131115|5082_1  21 MKQELKYIEeetvkSMQEQQVELHRDMQD------AMAKQQMTLRQDISKWSNSVVKQQHV 75 
                 55666666566666*************98......44444445567777777777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1711  (0.125146); expected 273.4 (0.02)
Passed bias filter:                      717  (0.0524429); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 432.39
//
Query:       MMETSP1325-20131115|5081_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 464.60
//
Query:       MMETSP1325-20131115|5080_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 343.63
//
Query:       MMETSP1325-20131115|5083_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-59  201.1   0.1    2.3e-59  200.9   0.1    1.0  1  PF01222.12 Ergosterol biosynthesis ERG4/ERG24 family
      8e-05   21.9   0.0    9.5e-05   21.6   0.0    1.1  1  PF06966.7  Protein of unknown function (DUF1295)
  ------ inclusion threshold ------
      0.087   12.4   0.2      0.095   12.3   0.2    1.3  1  PF02544.11 3-oxo-5-alpha-steroid 4-dehydrogenase


Domain annotation for each model (and alignments):
>> PF01222.12  Ergosterol biosynthesis ERG4/ERG24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.9   0.1   4.9e-63   2.3e-59     287     432 .]       2     146 .]       1     146 [] 0.98

  Alignments for each domain:
  == domain 1    score: 200.9 bits;  conditional E-value: 4.9e-63
  PF01222.12 287 qtlYLsvhPselgwstvlvailvvlligyyiFrsansqknnFRtnPedpklkllkyiqtktGskLlvsGWyglarkinYlgDwlqslswsLatgfqsvlpyfyvlyFlvlLvhRelRDeekCkkkYGedweeYkkkvpykiipyvy 432
                 q++YL+ h  +l  +  l+ai v++++gy++Fr an+qk++FR+ P+ p++ +lky++t++G++LlvsG++glarkinY+gDw + lsw+L tgf+s++pyfy +yF vlLvhR+ RD+  C +kYG+dw +Yk  vpy ++p+++
  MMETSP1325-20131115|5083_1   2 QARYLVHHDPDLPLP-ALAAIAVLNMMGYFVFRGANGQKDAFRRDPNAPEVAHLKYMPTERGTRLLVSGYWGLARKINYTGDWCMGLSWCLLTGFNSLVPYFYAIYFGVLLVHRAIRDDGFCAAKYGADWPKYKSAVPYMFVPGLF 146
                 99******8899999.59*****************************************************************************************************************************987 PP

>> PF06966.7  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   2.1e-08   9.5e-05     116     198 ..      14     109 ..       3     134 .. 0.78

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 2.1e-08
   PF06966.7 116 alkaldviglalwlvgivlealaDqQlsaf............kkdpankgk.vldsGLwrysRHPNYfgealiWwglflia.lealeglealaiagp 198
                 +l al+ i++ l ++g  +   a  Q+ af            k+ p+ +g  +l sG w ++R  NY g++++ ++ +l++ +++l ++ +++ +g 
  MMETSP1325-20131115|5083_1  14 PLPALAAIAV-LNMMGYFVFRGANGQKDAFrrdpnapevahlKYMPTERGTrLLVSGYWGLARKINYTGDWCMGLSWCLLTgFNSLVPYFYAIYFGV 109
                 4555555554.5667777778899**************************98*********************999887651555555544444443 PP

>> PF02544.11  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   2.1e-05     0.095      71     150 .]      60     141 ..       2     141 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.1e-05
  PF02544.11  71 etkykiprgglFelvsapnyfgEilewigyalvt..kslaalaFalftvlnltvraaahhkwykkkf.ekYpksRkiliPfvf 150
                 e + ++   g++ l    ny+g+ +  +++ l+t   sl  + +a++  + l+ ra++   +  +k+  ++pk + + +P++f
  MMETSP1325-20131115|5083_1  60 ERGTRLLVSGYWGLARKINYTGDWCMGLSWCLLTgfNSLVPYFYAIYFGVLLVHRAIRDDGFCAAKYgADWPKYKSA-VPYMF 141
                 556666777888899999*************99733688888899999999***********999998889987665.68876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 744.40
//
Query:       MMETSP1325-20131115|5085_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|5086_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.1   0.0      0.023   14.6   0.0    1.3  1  PF14289.1 Domain of unknown function (DUF4369)


Domain annotation for each model (and alignments):
>> PF14289.1  Domain of unknown function (DUF4369)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.7e-06     0.023      48      86 ..      31      71 ..      23      72 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.7e-06
   PF14289.1 48 GkFsfsgkvdeptlayl..aikkgdndriplflepgkitik 86
                G+ +f g+++e t  +l  +  +g+++++ ++l  g iti+
  MMETSP1325-20131115|5086_1 31 GSVTFAGTTTEMTDGFLvdFGADGGEYNYDFYLADGPITIE 71
                899***********9998888888999************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.61
# Mc/sec: 286.78
//
Query:       MMETSP1325-20131115|5087_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 352.67
//
Query:       MMETSP1325-20131115|5084_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 1085.41
//
Query:       MMETSP1325-20131115|5088_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0022   17.6   0.0     0.0041   16.7   0.0    1.4  1  PF09596.5 MamL-1 domain


Domain annotation for each model (and alignments):
>> PF09596.5  MamL-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0     3e-07    0.0041       7      29 ..      72      94 ..      68     105 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 3e-07
   PF09596.5  7 vveRLRrRielcRrhhvsCesRY 29
                +v+RL +Ri+ +R   v+Ce R 
  MMETSP1325-20131115|5088_1 72 IVDRLLERIAHYRSSMVTCEWRG 94
                9*******************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 903.63
//
Query:       MMETSP1325-20131115|5090_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|5091_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 456.23
//
Query:       MMETSP1325-20131115|5093_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|5092_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 264.60
//
Query:       MMETSP1325-20131115|5094_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.099   11.2   0.0       0.11   11.1   0.0    1.0  1  PF05035.7 2-keto-3-deoxy-galactonokinase


Domain annotation for each model (and alignments):
>> PF05035.7  2-keto-3-deoxy-galactonokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.8e-06      0.11      65     113 ..       4      55 ..       2      75 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 7.8e-06
   PF05035.7  65 qGWaeapylavPaslaalaaalvrve.aeeeevaivpGls..eadeapdVmR 113
                 +GW+ea+  ++P++l+ala+++++ + +++  ++++  l+  + de +d+ R
  MMETSP1325-20131115|5094_1   4 HGWIEADTHHLPLALQALANDMASEAaRRALFIRLLHALAvaRFDEFHDIWR 55 
                 6********************9998867778888898888745555668877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|5095_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-27   94.0   0.0    7.1e-27   93.9   0.0    1.0  1  PF03031.13 NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> PF03031.13  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.9   0.0   5.2e-31   7.1e-27      34     141 ..       1     108 [.       1     109 [] 0.95

  Alignments for each domain:
  == domain 1    score: 93.9 bits;  conditional E-value: 5.2e-31
  PF03031.13  34 gldeFLkelskayevviftasskeyadavldkldpkkklfkkrlyresctlengkyvKdLsllgrdlskvvivDdsprsfelqpdnlipiepfygds.dkdtellkllp 141
                 g+d+FL e+s++ye+v f+   + +a ++++ ld+ ++++ +rl+res+++ ng +vKdLs+++r+++k+v++Dd+p +++lqp n+i++epf +    +d++l++l+p
  MMETSP1325-20131115|5095_1   1 GVDKFLLEMSRYYEIVFFSPNIEGNAGPIMNLLDK-NHVVYHRLFRESTKFVNGVHVKDLSYMNRNMKKMVLIDDDPAAYQLQPGNAIQVEPFSNPLdRSDSTLEDLIP 108
                 79********************************6.8999**************99*************************************9877656889999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 458.25
//
Query:       MMETSP1325-20131115|5098_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-53  178.9   1.2    8.7e-53  178.8   0.8    1.0  1  PF00378.15 Enoyl-CoA hydratase/isomerase family
     0.0022   17.7   0.2      0.047   13.3   0.0    2.3  2  PF01343.13 Peptidase family S49
     0.0064   16.5   0.0     0.0093   15.9   0.0    1.2  1  PF13766.1  2-enoyl-CoA Hydratase C-terminal region


Domain annotation for each model (and alignments):
>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.8   0.8   1.9e-56   8.7e-53      90     245 .]       2     157 ..       1     157 [. 0.99

  Alignments for each domain:
  == domain 1    score: 178.8 bits;  conditional E-value: 1.9e-56
                 SS--EEEE---B-----HHHHHSSEEEEETT-EE--CCCC-----------HHHHH---HHHHHHHH----EEHHHHHHTTSSSEEE-GCC---HHHHHHHHHH--S--SS-HHHHHHH..HHHH------------HCHHHHHHHHHHCCG---H CS
  PF00378.15  90 ekpvvAavnGaalGGGlelalacdyriaadeakfglpevklGilpgaggtqrlprlvGvsaAlemiltgrriradeAlkvGlvdkvvpeeelveeaielakrladkpklalallkkamraalekalsevrkqelklypallakedvkegvqaflek 245
                 +kpv+AavnG+alGGG+ela++cd+++a ++akfg+pe+klG++pg ggtqrl+r++G+++A+emiltg+ i+a++Al  Glv++v+p+e+lv+ea+++a ++a+ ++  +a++k++++aa e  l+e   +e++l+++l+a ed keg+ af ek
  MMETSP1325-20131115|5098_1   2 NKPVIAAVNGYALGGGCELAMMCDMMVAGENAKFGQPEIKLGVIPGCGGTQRLIRAIGKAKAMEMILTGNLIGAEQALSDGLVSRVFPTETLVDEAVAIADQIASFSQPVVAVAKETVNAAEELPLTEGIRFERRLFHSLFALEDQKEGMGAFIEK 157
                 89*******************************************************************************************************************************************************986 PP

>> PF01343.13  Peptidase family S49
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0     1e-05     0.047       6      37 ..       2      33 ..       1      38 [. 0.91
   2 ?    2.0   0.0      0.03   1.4e+02     112     147 ..      62      97 ..      56     105 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1e-05
  PF01343.13  6 kkPvvasagnvaaSggyylasaadkivanpst 37
                +kPv+a ++++a  gg  la+ +d  va +++
  MMETSP1325-20131115|5098_1  2 NKPVIAAVNGYALGGGCELAMMCDMMVAGENA 33
                7*************************998776 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.03
  PF01343.13 112 dqvkklAegrvltgqqAveagLvdelgtlddavael 147
                 ++++ + +g+   ++qA++ gLv ++   +++v+e+
  MMETSP1325-20131115|5098_1  62 KAMEMILTGNLIGAEQALSDGLVSRVFPTETLVDEA 97 
                 556667788888999*********998888888776 PP

>> PF13766.1  2-enoyl-CoA Hydratase C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0     2e-06    0.0093      34     102 ..      98     164 ..      85     165 .] 0.91

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2e-06
   PF13766.1  34 aktlktlrkkSplslkvtleqlrrgrelslaealrlElrlaarlmaegDfveGVralliDKdknPkWkp 102
                  ++++++++ S   ++v+ e ++ ++el l e +r E rl ++l+a +D  eG  a  i+K ++P+Wk+
  MMETSP1325-20131115|5098_1  98 VAIADQIASFSQPVVAVAKETVNAAEELPLTEGIRFERRLFHSLFALEDQKEGMGA-FIEK-RAPEWKH 164
                 56788999999999***************************************998.5777.89***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.60
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|5096_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 648.43
//
Query:       MMETSP1325-20131115|5100_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 779.99
//
Query:       MMETSP1325-20131115|5101_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.59
# Mc/sec: 1011.34
//
Query:       MMETSP1325-20131115|5102_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-09   36.4   0.2      3e-09   36.1   0.2    1.1  1  PF00295.12 Glycosyl hydrolases family 28


Domain annotation for each model (and alignments):
>> PF00295.12  Glycosyl hydrolases family 28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.2   2.2e-13     3e-09     202     320 ..       3     130 ..       1     141 [. 0.80

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 2.2e-13
                 -EEEEEEEEEEEES-----EEEEET..T----EEEEEEEEEEEE---.---EE..EEEE----..B----..-----EEEEEEE-EE----T.--S-EEE-----.EEEEEE-----------S--BS- CS
  PF00295.12 202 tVsnvtvkdctvtgtdngvRiKtak..gatgtvsnityenielknva.npivi..dqdYedkk..pcgkp..tsgvkisditfknitgtvas.aeavkllcskgspcsgvtledvdltgGkktascknv 320
                  ++++ +k++ ++    +v iKt++  ++ g ++nitye+ ++++    pi i  +q+ e+++      p  +  ++isdi ++nit+      +a +l c+ + pc+++++edv +++   ++s++++
  MMETSP1325-20131115|5102_1   3 CIKDILFKGASFKYPFKAVYIKTNSgdEGDGIIQNITYEDMTIQEPVlWPIYIgpQQQKEPNGigDGIWPntQPLITISDIHLRNITSKGGFiPHAGVLRCNASNPCTNIVVEDVIIES-RYSTSLNYI 130
                 578899999999999999*****99888999************99666*****5534444422111112212459*************999999************************9.666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.60
# Mc/sec: 635.03
//
Query:       MMETSP1325-20131115|5106_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   57.0   0.1    1.6e-15   56.8   0.1    1.0  1  PF03144.20 Elongation factor Tu domain 2


Domain annotation for each model (and alignments):
>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.1   1.2e-19   1.6e-15       1      74 []      17      84 ..      17      84 .. 0.97

  Alignments for each domain:
  == domain 1    score: 56.8 bits;  conditional E-value: 1.2e-19
                EEEEEEEEEE--EETTEEEEEETTTCTEEEEEEEEEEEEETTCEESEEECEE--EEEESSSGGGGGTT---EEE CS
  PF03144.20  1 GtvatgrvysGtlkkGdtvrilgndtskkeivtrvrsletfngdldeavaganaGvivaikgledaiikGdtlt 74
                Gt+++ r+ysG+l  G tv +  + ++k    +rv++++ +n++ + ++++a aG+iva+ gl+d+  +G tl+
  MMETSP1325-20131115|5106_1 17 GTLTFTRIYSGVLTAGSTVFN--SVKQKN---ERVGRMLQMNANDRTEIKEARAGDIVALCGLKDT-TTGETLC 84
                89*******************..998888...*********************************6.*****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 363.73
//
Query:       MMETSP1325-20131115|5105_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.30s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|5107_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 604.08
//
Query:       MMETSP1325-20131115|5109_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.032   13.4   0.0      0.033   13.4   0.0    1.1  1  PF02431.10 Chalcone-flavanone isomerase


Domain annotation for each model (and alignments):
>> PF02431.10  Chalcone-flavanone isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.4e-06     0.033     114     158 ..      19      60 ..       3      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.4e-06
  PF02431.10 114 eeeeealeefkelfksrgsvpkgssllltrsakgslkvsfskegk 158
                  + e a e+f+++f    sv+ g  l+++++ +g+l+++ sk g 
  MMETSP1325-20131115|5109_1  19 GASEDAAEDFQQTF---VSVKEGAYLVFRLEGRGKLEIVWSKSGR 60 
                 6788999*******...69********************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.64
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|5110_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-08   31.9   0.1    2.5e-07   30.2   0.1    1.8  2  PF13855.1  Leucine rich repeat
    0.00029   20.3   0.0       0.91    9.6   0.0    3.2  3  PF00560.28 Leucine Rich Repeat
    0.00086   18.7   0.0       0.23   11.0   0.0    2.5  2  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.021   14.9   3.7       0.05   13.7   2.6    1.7  1  PF00066.12 LNR domain


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.1   7.2e-11   2.5e-07      11      61 .]       3      54 ..       1      54 [. 0.92
   2 !    5.8   0.0     0.003        10      16      46 ..      33      63 ..      31      76 .. 0.88

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 7.2e-11
   PF13855.1 11 NrlkvipdgaFkglsnLkvLdLsgnnl.ksispeafkgLpsLreLnLsgNrl 61
                +++++i  ++F gl++L+ +dLs++n+ + i++++f++ + L   +L ++++
  MMETSP1325-20131115|5110_1  3 TSIRNITSDTFRGLHHLTAIDLSHTNIsHPIHAGTFANNKDLGFMSLAYTQI 54
                689************************668**********999999999876 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.003
   PF13855.1 16 ipdgaFkglsnLkvLdLsgnnlksispeafk 46
                i+ g+F + + L  ++L ++ ++ ++++af 
  MMETSP1325-20131115|5110_1 33 IHAGTFANNKDLGFMSLAYTQIQAVEAGAFP 63
                67899*********************99985 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0         1   3.5e+03       9      22 .]       2      16 ..       1      16 [. 0.78
   2 !    9.6   0.0   0.00027      0.91       1      21 [.      18      40 ..      18      41 .. 0.86
   3 !    6.9   0.0    0.0021       7.1       3      15 ..      67      88 ..      65      94 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 1
                SSBCBCHHHH.HHHH CS
  PF00560.28  9 gNnltslpps.lsnL 22
                g+++ ++ ++ +++L
  MMETSP1325-20131115|5110_1  2 GTSIRNITSDtFRGL 16
                567888999999876 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00027
                TESEEEETSSBCB.CHHHH.HHH CS
  PF00560.28  1 nLeeLdLsgNnlt.slpps.lsn 21
                +L+ +dLs++n++  ++ + + n
  MMETSP1325-20131115|5110_1 18 HLTAIDLSHTNIShPIHAGtFAN 40
                6999*********6699998877 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0021
                SEEEETSSBCBC.........H CS
  PF00560.28  3 eeLdLsgNnlts.........l 15
                e+L L g+ lt+         l
  MMETSP1325-20131115|5110_1 67 EHLWLTGCGLTCaelegvdgaL 88
                8*********975655555555 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   6.8e-05      0.23      10      37 ..       2      30 ..       1      40 [. 0.90
   2 !    5.4   0.0    0.0038        13       7      37 ..      48      77 ..      42      86 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.8e-05
   PF12799.2 10 nNnIkdlpp.elanLpnLktLnLsnNpis 37
                +++I ++   ++ +L  L+ ++Ls+++is
  MMETSP1325-20131115|5110_1  2 GTSIRNITSdTFRGLHHLTAIDLSHTNIS 30
                68999998856*****************8 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0038
   PF12799.2  7 dLsnNnIkdlppelanLp.nLktLnLsnNpis 37
                +L++++I+ +++  + +p + ++L+L+++ ++
  MMETSP1325-20131115|5110_1 48 SLAYTQIQAVEA--GAFPgSFEHLWLTGCGLT 77
                677777777777..777767889999999887 PP

>> PF00066.12  LNR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   2.6   1.5e-05      0.05      17      37 ..     110     134 ..      92     135 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.5e-05
                 T-------....--SCCCTT---TT CS
  PF00066.12  17 gdgvCDee....CnnaeCqfDGgDC 37 
                 g+g C+e+     n a+C+ DGgDC
  MMETSP1325-20131115|5110_1 110 GNGLCNEKsdplYNKAACLRDGGDC 134
                 89999999777779*********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 656.60
//
Query:       MMETSP1325-20131115|5104_1  [L=626]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-41  139.3   0.0    2.6e-40  137.8   0.0    1.7  2  PF00326.16 Prolyl oligopeptidase family
    1.9e-10   40.5   0.4    1.2e-09   37.8   0.3    2.0  2  PF02129.13 X-Pro dipeptidyl-peptidase (S15 family)
    1.9e-10   40.5   0.0    3.8e-10   39.5   0.0    1.5  1  PF12695.2  Alpha/beta hydrolase family
    3.4e-10   39.4   0.1    9.8e-08   31.4   0.0    2.4  2  PF01738.13 Dienelactone hydrolase family
    1.5e-07   31.4   0.0      3e-07   30.4   0.0    1.5  1  PF12697.2  Alpha/beta hydrolase family
     0.0032   16.8   0.0     0.0062   15.8   0.0    1.4  1  PF00756.15 Putative esterase
     0.0032   17.1   0.0     0.0097   15.5   0.0    1.8  2  PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
     0.0061   16.2   0.0      0.013   15.2   0.0    1.6  1  PF12146.3  Putative lysophospholipase
  ------ inclusion threshold ------
      0.012   15.0   0.5       0.95    8.8   0.0    2.8  2  PF07859.8  alpha/beta hydrolase fold
      0.016   14.2   1.0        1.4    7.8   0.6    2.2  2  PF03583.9  Secretory lipase
      0.036   12.5   0.1         11    4.3   0.0    3.1  4  PF00930.16 Dipeptidyl peptidase IV (DPP IV) N-terminal region


Domain annotation for each model (and alignments):
>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.1   1.3e+03     119     156 ..     297     333 ..     285     371 .. 0.55
   2 !  137.8   0.0   2.1e-43   2.6e-40       1     212 [.     380     594 ..     380     595 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.1
                 ---TTSHHH.HHHHHHH-GGG-------EEEEE.ETT-S CS
  PF00326.16 119 ygnpeeneegyeelspyspadnvkaypplllih.GeeDd 156
                 +  + +  +g +e s+y+ a++  ++ pl++++ +++D+
  MMETSP1325-20131115|5104_1 297 WVVSVRRDDGPTEYSTYDRATK--KTSPLFVTQkSLLDY 333
                 5555555555566677777777..445554443233333 PP

  == domain 2    score: 137.8 bits;  conditional E-value: 2.1e-43
                 ----HHHHHHHH----EEEE----------TTT----GGGGHHHHH.HHHHHHHHHHH-----GGGEEE--------HHHHHHHH-GGG---EEEE-----TTTGGGS-.....---GGGG...T---TTSHHH.HHHHHHH-GGG-------EEEEEETT-SSS-THHHHHHHHHHH..--SEEEEEES---------HHHHHHHHHHHHHHHHHHT- CS
  PF00326.16   1 psfsselqlladrGyvvvvanirGsggyGekwhdagkrklgqnefd.DfiaaaealakegyvdpdrlaitGgSyGGylvgaalnqrpdlFkaavaqvgvvdwltymsdtsl...lteaeym...eygnpeeneegyeelspyspadnvkaypplllihGeeDdrvppaealklvaaLqkagknvlllifpdegHgigkprakveelarllaFllkalgk 212
                 + f+s +q++a+rGy+v+++n+rGs+gy++++ ++g++++g  +++ D+ + +++++++g++ +d++ai+GgSyGGy  +a l+  pdl++++v  vg ++  t   +  +   +++ + +   + g+ +++ +  e +sp++++d+  + +pll+ +G +D+rv  ae+ +++ a+ ++g +v+++ +pdegHg+++p ++++  ar  aFl+k+lg+
  MMETSP1325-20131115|5104_1 380 WGFNSSAQWFANRGYAVLQVNYRGSSGYSKTFLHKGDKEWGIGSMQhDLTDSVKWAVEQGIAIEDKVAIYGGSYGGYACLAGLTFTPDLYACGVDIVGPSNIKTLLDS--IppyWGPMRNDmlkKIGDVDNDAAFNESISPLFHIDA--ISKPLLIGQGANDPRVKQAESDQIAVAMCDRGIPVEYVLYPDEGHGFARPVNRIDFNARAEAFLAKHLGG 594
                 6899*************************************988744*****************************************************99988655..4457666444311144555557777778899999999..*******************************************************************996 PP

>> PF02129.13  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.3   9.7e-13   1.2e-09       1     138 [.     347     481 ..     347     488 .. 0.82
   2 ?   -0.1   0.0      0.37   4.5e+02     201     244 ..     499     542 ..     490     549 .. 0.84

  Alignments for each domain:
  == domain 1    score: 37.8 bits;  conditional E-value: 9.7e-13
                 ---EEEEEEEEE..TTSSSBEEEE..EEESS-TTH.HHHHHCTCHHCCH...HHHHC---EEEEEE----.TT-.....-----TTTCCHHHHHHHHHHHHHHC.TTBE-EEEE---TT---HHHHHTTS--TTB-EBEEBSB-SBC CS
  PF02129.13   1 DGvrLavdiyrPetkskkklPvll..trtpYnksdelaatlasalgekelqdkafvarGYavVvvdvrGt.gaS.....eGeftvgsedevedgadvidWlakq.pwsnGkVGmtGiSYdGttqlaaaatgvpalkaivpesaisdl 138
                 DG +L + + r   +++k++P +l  +  p+ +++ + ++++  +         f++rGYav+ v+ rG+ g+S     +G+ ++g    + d  d ++W+++q    ++kV+++G SY+G+++la ++  ++  ++ v ++++s+ 
  MMETSP1325-20131115|5104_1 347 DGLELVAYLTRA--DTSKPTPLILfvHGGPWARDT-WGFNSSAQW---------FANRGYAVLQVNYRGSsGYSktflhKGDKEWGIGSMQHDLTDSVKWAVEQgIAIEDKVAIYGGSYGGYACLAGLTFTPDLYACGVDIVGPSNI 481
                 778888888888..999999999722457999755.888888777.........***************635562222257777779999*************************************99888888887777777765 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.37
                 HHHCCCC--SSSHHHHTTBHGGGHHG--SEEEEEE--B-SSS-H CS
  PF02129.13 201 vlselletgdydafwkernlsedadkvkvpvllvsGwnDwnvkr 244
                 +l+++ + ++  af +++++  ++d++  p+l+ +G nD  vk+
  MMETSP1325-20131115|5104_1 499 MLKKIGDVDNDAAFNESISPLFHIDAISKPLLIGQGANDPRVKQ 542
                 677788889999999999*9999****************66554 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   3.1e-13   3.8e-10       1     141 [.     366     569 ..     366     570 .. 0.72

  Alignments for each domain:
  == domain 1    score: 39.5 bits;  conditional E-value: 3.1e-13
   PF12695.2   1 lvvlvhGagg..dssayeplaealakrgfavvavdlpghgasegaa...................aakrvlaadlldleriilvGhSlGGgvalelag................................rddrvkglvllap...f.....pdgedlakltlpvllihGtrDgvvppeeaeklakalp...gdaelvviegasH 141
                 l+++vhG+    d +++++ a+ +a+rg+av+ v+++g++  +++                     +k++++++ +  ++++++G S+GG++ l+                                   r+d +k++  ++    f     p   +++++++p+l+ +G++D  v+++e++++a a+     ++e+v+ ++ +H
  MMETSP1325-20131115|5104_1 366 LILFVHGGPWarDTWGFNSSAQWFANRGYAVLQVNYRGSSGYSKTFlhkgdkewgigsmqhdltdSVKWAVEQGIAIEDKVAIYGGSYGGYACLAGLTftpdlyacgvdivgpsniktlldsippywgpmRNDMLKKIGDVDNdaaFnesisPL-FHIDAISKPLLIGQGANDPRVKQAESDQIAVAMCdrgIPVEYVLYPDEGH 569
                 599****96611555668*******************998863333344455677777777666545554534333457*************99966699999999*99997777777777777777776445555555555444332222221.24667778***************999998877766678889999999998 PP

>> PF01738.13  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0057       7.1       4     110 ..     354     456 ..     351     474 .. 0.66
   2 !   31.4   0.0   7.9e-11   9.8e-08     136     203 ..     517     585 ..     501     591 .. 0.90

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0057
  PF01738.13   4 ylatpknagkapavvviq......eifGvnknirdiarrlaeeGyvalapdlYarqgldandtaeaasalrellkkreeavlddlkaainylkslpevstkkvgvvGfClGGa 110
                 yl   +++++ p ++ ++      + +G n+      +++a+ Gy +l  ++    g     +++ + + + + +     ++ dl+++++++ ++    ++kv++ G   GG 
  MMETSP1325-20131115|5104_1 354 YLTRADTSKPTPLILFVHggpwarDTWGFNSSA----QWFANRGYAVLQVNYRGSSG-----YSKTFLHKGDKEWG-IGSMQHDLTDSVKWAVEQGIAIEDKVAIYGGSYGGY 456
                 555666666666666655444444888888777....8********99887544444.....22222222222222.356778888889999999988889999888777775 PP

  == domain 2    score: 31.4 bits;  conditional E-value: 7.9e-11
  PF01738.13 136 kpleeaakikapilahlgeeDpfipaeaaedleealakankdlelkiYpgagHaFaadsre.sydeaaa 203
                 +pl  +++i++p+l+  g +Dp +++++ +++  a+ +++ ++e  +Yp+ gH+Fa++ ++ ++++ a 
  MMETSP1325-20131115|5104_1 517 SPLFHIDAISKPLLIGQGANDPRVKQAESDQIAVAMCDRGIPVEYVLYPDEGHGFARPVNRiDFNARAE 585
                 6778899***************************************************99977777664 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   2.4e-10     3e-07       1     216 [.     367     570 ..     367     573 .. 0.73

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 2.4e-10
                 EEE------------H..HHHHHT.TTSEEEEE-----.----.....--S...S--H......HHHHHHHHHHHHH--....--EEEE--------HHHHHH----.EEEEEEE------STT---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH--GGGG....GG------HHHHTT--S-EEEEE-----HHH....HHHHHHHHHHSTTEEEEE---SSSS CS
   PF12697.2   1 vvllHGlggsaeswrp..laeaLa.agyrvvapDlpGh.GrSd.....rppdydpdtl......edlaadlaalldalgl...rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpasalrpagpsllrrllagraaalrdlaarafarlfdgdelealvradaaalaellraalldadlrealarldvPvlviageaDrvvp....peearrlaealpgarvvvlpgagHl 216
                 ++++HG+++  + w     a+ +a +gy v+ ++++G  G S      +     +  +      +dl++ +  ++++ g+   ++v + G S+Gg + la +   pd      l+++++        + gps +++ll + ++ + +++++ + + + + + +a +++                ++  ++ +++ P l+ +g++D+ v     ++ a ++ +++  +++v +p+ gH 
  MMETSP1325-20131115|5104_1 367 ILFVHGGPWARDTWGFnsSAQWFAnRGYAVLQVNYRGSsGYSKtflhkG-----DKEWgigsmqHDLTDSVKWAVEQ-GIaieDKVAIYGGSYGGYACLAGLTFTPD------LYACGV-------DIVGPSNIKTLLDSIPPYWGPMRNDML-KKIGDVDNDAAFNE--------------SISPLFHIDAISKPLLIGQGANDPRVKqaesDQIAVAMCDRGIPVEYVLYPDEGHG 570
                 79******999666653378888879**********9635554333221.....33345555567777777777777.334679****************9999***......555555.......555667778888888887777765544.45666666666653..............3344479999*****************66666666666777788***********6 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     5e-06    0.0062      13     160 ..     354     507 ..     349     556 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 5e-06
                 E..TTTSSGTTB-EEEE-------TCCHHHHCHHCCHHHC...EEEEEECCE----S-TTSB-SS-....BB--SHHCHTCHCHHHHTCHHHHHHHHH-B----EEEE--THHHHHHHHHHHH-TTT-SEEEEES----TT.........CCH---............T CS
  PF00756.15  13 yLPedyspgrkypvvylldGltgwdqnfrakelleslaregeiaeviivvvprggessfysdwdlgarfyenategpgaeayetfltqeLlplldanfrtapdgravaGqSmGGlgALilalkhpdrFgsvssfSpivnps.........namWgq............e 160
                 yL++  +++++ p++++ +G   w +++  +    +  + +     ++  v + g s     +   + f +++ ++ g    ++ lt+ +   +++   ++++  a+ G S GG++ L   +  pd++++      iv ps         +++Wg+             
  MMETSP1325-20131115|5104_1 354 YLTRA-DTSKPTPLILFVHG-GPWARDTWGFNSSAQWFANR---GYAVLQVNYRGSS----GYS--KTFLHKGDKEWGIGSMQHDLTDSVKWAVEQGIAIEDK-VAIYGGSYGGYACLAGLTFTPDLYACGVD---IVGPSniktlldsiPPYWGPmrndmlkkigdvD 507
                 56666.67777777777777.77777654444443333332...3566666666666....333..45777888888888889999999999***********.************************65444...455555669999999999995555554444433 PP

>> PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       6.5     8e+03     104     128 ..     211     235 ..     206     236 .. 0.86
   2 !   15.5   0.0   7.8e-06    0.0097      19     199 ..     441     606 ..     429     617 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 6.5
                 -STTS--GGG----EEEEE----SS CS
   PF08840.6 104 aekalipverakgpillvvgedDkn 128
                 + +al++v+ a g+ l vv+e Dk+
  MMETSP1325-20131115|5104_1 211 ETTALLKVDMATGETLEVVAESDKC 235
                 5678999999999999999999987 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 7.8e-06
                 B-------B------HHHHHHHHHSSS---E.EEE----------EEETTE..EE------GGG-EE-----EE-TT-S--------STTS--GGG----EEEEE----SSS-HHHHHHHHHHHHHH----.--EEEE---------STT---.--EEEETTTTEEEE----HHHHHHHHHHH CS
   PF08840.6  19 vkkdkigllGiSkGgelalllasflkkisav.vlingsavvvegkllykeeskvlpelkesleklkvnenglldildtlallksklaekalipverakgpillvvgedDknwpSkesaekaserLkkagkkvevqlltYpkaGHliepPyfpl.craslaklvgekvlyGGetkahakAqeds 199
                   +dk++++G S Gg  +l+  +f ++  a+ v i+g++ +     l +     +p+ +  +++   ++ g +d   ++++         l+ ++ ++ p+l+ +g +D  ++ +es ++a++ +   g +  v+++ Yp+ GH ++ P   + ++a  ++++    + GG  ++   Aq +s
  MMETSP1325-20131115|5104_1 441 AIEDKVAIYGGSYGGYACLAGLTFTPDLYACgVDIVGPSNIK---TLLD----SIPPYWGPMRNDMLKKIGDVDNDAAFNESI-----SPLFHIDAISKPLLIGQGANDPRVKQAESDQIAVA-MCDRGIP--VEYVLYPDEGHGFARPVNRIdFNARAEAFLA--KHLGGRAEPITDAQSQS 606
                 5579***********999998888886655438899988776...4444....69999*999998777777777777777663.....4489************************9966665.5666777..9999*********999765414444444444..45566555555555554 PP

>> PF12146.3  Putative lysophospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     1e-05     0.013       9      57 ..     356     408 ..     348     433 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1e-05
   PF12146.3   9 wlpeep.pkaavvlvhgl..aEhsgrYqelaedLaaqGyavyayDhrGh.Gks 57 
                   ++++ p+ ++++vhg+  a  ++ ++  a+++a++Gyav+   +rG  G s
  MMETSP1325-20131115|5104_1 356 TRADTSkPTPLILFVHGGpwARDTWGFNSSAQWFANRGYAVLQVNYRGSsGYS 408
                 4444556899********8889999***********************52455 PP

>> PF07859.8  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.6     0.077        95      49      82 ..     425     455 ..     367     463 .. 0.66
   2 ?    8.8   0.0   0.00077      0.95     151     210 ..     511     572 ..     489     573 .. 0.79

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.077
                 HHHHHHHHHHHHHTTTTHTCC.CCEEEEE------ CS
   PF07859.8  49 vedalaalrwlaeqawelgad.psrivvaGdSaGG 82 
                   d  + ++w +eq     +   +++++ G S GG
  MMETSP1325-20131115|5104_1 425 QHDLTDSVKWAVEQG----IAiEDKVAIYGGSYGG 455
                 567888888888884....3325689999999998 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00077
                 G.STTTSGGGS.S-HTT---EEEEEEEE-TTS----..HHHHHHHH----EEEEEEE-EE--TC CS
   PF07859.8 151 d.dplasplla.sdlsglpptlvvvaelDplrdege..ayaerlraagvevelveyegmvHgfa 210
                 + ++ +spl++ + +s  +p l+  + +Dp  +++e  + a ++ + g +ve+v y+++ Hgfa
  MMETSP1325-20131115|5104_1 511 AfNESISPLFHiDAIS--KPLLIGQGANDPRVKQAEsdQIAVAMCDRGIPVEYVLYPDEGHGFA 572
                 3367889999933354..9**********99887763378999999*****************8 PP

>> PF03583.9  Secretory lipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.6    0.0012       1.4      24      99 ..     391     473 ..     386     479 .. 0.81
   2 ?    4.1   0.0     0.016        20     221     264 ..     527     569 ..     509     577 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0012
   PF03583.9  24 kqGvyVvvpDYeGpks...........tftvgrqsgkavLdsirAalkskkvsgitsdakvalwGYsgGslAsawAaelqpe.YApel 99 
                 ++G++V    Y G  +            +++g  + +   ds++ a       gi+ + kva++G s+G+ A  +  +  p+ YA  +
  MMETSP1325-20131115|5104_1 391 NRGYAVLQVNYRGSSGysktflhkgdkEWGIGSMQ-HDLTDSVKWAV----EQGIAIEDKVAIYGGSYGGYACLAGLTFTPDlYACGV 473
                 58999999999999888888888888888888776.66779999888....35899999*************9988888876577665 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.016
   PF03583.9 221 iPvlvyhgvldeivpiadakklakswcdkgiasvefaedlingH 264
                  P+l+ +g+ d  v  a+++++a   cd+gi  ve++    +gH
  MMETSP1325-20131115|5104_1 527 KPLLIGQGANDPRVKQAESDQIAVAMCDRGI-PVEYVLYPDEGH 569
                 69****************************8.9**987666666 PP

>> PF00930.16  Dipeptidyl peptidase IV (DPP IV) N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.025        31      48      84 ..       2      45 ..       1      65 [. 0.80
   2 ?    4.3   0.0    0.0088        11     240     282 ..      37      85 ..      23     100 .. 0.64
   3 ?    0.0   0.0      0.18   2.2e+02     166     265 ..      79     185 ..      70     193 .. 0.63
   4 ?    3.0   0.0     0.022        28     192     280 ..     279     375 ..     247     397 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.025
                EEE------EEEEETT.....EEEEESSTTS..--EECE---TT CS
  PF00930.16 48 akwSPdgdklafvrnn.....nLyvrelatg..ketqltsdGea 84
                +++SP g+klaf   +     n++vr+la g  + +q+t d+  
  MMETSP1325-20131115|5104_1  2 PDLSPCGTKLAFLKPSpsgvlNVWVRDLAVGetSDRQVTADEYR 45
                68899999999998766666699999999998888999999843 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0088
                 -EE-.---SEEEEEEE.---EEEEEEEESS--C......CCBS------E CS
  PF00930.16 240 vvflkrdeseflwise.rdGykhLylfdldgkk......ikalTsGeweV 282
                   ++  de + ++i +  ++ khL +++ dg+       ++ +T+G+  V
  MMETSP1325-20131115|5104_1  37 RQVT-ADEYRGIRIFSwAEDNKHLLYMQDDGGDenfhlwKIEITEGAVAV 85 
                 3333.555666666666777777777777777766666666777777766 PP

  == domain 3    score: 0.0 bits;  conditional E-value: 0.18
                 CGGGC-.EE---HHHHGTTEEEEEEEESSSSEEEEEEEEETTSTEEEEEEEETT.TTEEEEE..EEE-SS--......-S-S--EE-.---SEEEEEEE---..EEEEEEE CS
  PF00930.16 166 asgktv.eiqppdslsekdeyiarvkWtsdekrllvqwlnRsqnrlklvlvdaetgravvkl..eetsdgWv......elhdevvflkrdeseflwiserdG..ykhLylf 265
                 ++g++  +++p+   ++++++i++  + +d  +ll+ + +R+   ++++ ++ +tg+ ++++    +  gW       e+++ +v+ + d+s+ +++ ++++  ++ L+ f
  MMETSP1325-20131115|5104_1  79 TEGAVAvDLTPF-PGAKAQNLITNKRF-PD--ELLIGVNKRDAAMFDMYRCNIATGELTLDTtnPGDVVGWGaedesfEVREATVVNQADSSQTVRVRDSKDaeWRELATF 185
                 555544444444.45667777777777.55..38999999***********999999999985422333455333333444444444677777777777444357777766 PP

  == domain 4    score: 3.0 bits;  conditional E-value: 0.022
                 SSSSEEEEEEEEETTSTEEEEEEE....ETT.TTEEEEEEEE-SS---S-S--EE-.---SEEEEEEE---EEEEEEEESS--C.....CCBS----- CS
  PF00930.16 192 tsdekrllvqwlnRsqnrlklvlv....daetgravvkleetsdgWvelhdevvflkrdeseflwiserdGykhLylfdldgkk.....ikalTsGew 280
                 ++++ +++++  nR+ ++ ++++      +e ++ + ++++ts+ +v +++   +    + e ++i  rdG + ++++++ +++     i  +  G w
  MMETSP1325-20131115|5104_1 279 APEGSEVSMVSYNRDDTKWVVSVRrddgPTEYSTYDRATKKTSPLFVTQKSLLDYK-FAHMEDVRITARDGLELVAYLTRADTSkptplILFVHGGPW 375
                 46777799999999999998888876332344666666699999999999999987.99999999999999999999998888754443224444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.05u 0.37s 00:00:01.42 Elapsed: 00:00:00.65
# Mc/sec: 2307.88
//
Query:       MMETSP1325-20131115|5115_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       570  (0.041691); expected 273.4 (0.02)
Passed bias filter:                      473  (0.0345963); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 871.87
//
Query:       MMETSP1325-20131115|5114_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.22   10.6   1.4       0.28   10.3   1.0    1.1  1  PF01885.11 RNA 2'-phosphotransferase, Tpt1 / KptA family


Domain annotation for each model (and alignments):
>> PF01885.11  RNA 2'-phosphotransferase, Tpt1 / KptA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.0   2.1e-05      0.28      82     153 ..       3      74 ..       2      78 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 2.1e-05
                 ----S-.--....---...------SEEEE-E.EGGGHHHHHH--.------SSEEEES-HHHHHH-------EE CS
  PF01885.11  82 qGhSiklvea.alleklkleeeelpellvhGT.yeealdsilesG.LkkmsRnhvhlstgeekavisGmrrdaev 153
                  GhS ++ ++ ++ ++ ++++++   l vh    +  ++s+l+sG L+    + vhl  + ++++i Gm r++++
  MMETSP1325-20131115|5114_1   3 HGHSHSHSHShGHGHR-TQARSQ--ILPVHILpVHFCVRSLLSSGlLQSTCESDVHLFCSMKASTILGMSRTSSI 74 
                 5888886666444444.333333..334444304556899*****99999*******************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 453.78
//
Query:       MMETSP1325-20131115|5116_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.81    9.4   7.3       0.33   10.6   0.7    2.2  2  PF06645.8 Microsomal signal peptidase 12 kDa subunit (SPC12)


Domain annotation for each model (and alignments):
>> PF06645.8  Microsomal signal peptidase 12 kDa subunit (SPC12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.7   2.4e-05      0.33      48      65 ..      17      34 ..       3      46 .. 0.71
   2 ?    1.8   1.1     0.014   1.9e+02      11      47 ..      46      82 ..      40      87 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 2.4e-05
   PF06645.8 48 tlllvvPpWPfYnknplk 65
                 +++vvPp+ +Y++  l 
  MMETSP1325-20131115|5116_1 17 LAIVVVPPYRLYRRPALG 34
                35899*********8775 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.014
   PF06645.8 11 klvqiillivavisfivGyilqdlsltvyillagtvl 47
                 l+ +   +++  s  +G ++  ++++v+++l+g ++
  MMETSP1325-20131115|5116_1 46 SLTAAYTGLFVTTSADYGAYVYLFDQVVLTCLVGPFI 82
                5566667777888888888888888888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|5119_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 270.70
//
Query:       MMETSP1325-20131115|5121_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       70  (0.00511995); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 257.72
//
Query:       MMETSP1325-20131115|5117_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   10.4   6.2       0.24    9.9   4.1    1.5  1  PF08317.6 Spc7 kinetochore protein


Domain annotation for each model (and alignments):
>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.1   1.8e-05      0.24     179     269 ..      51     144 ..      19     154 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 1.8e-05
   PF08317.6 179 lpklrekkealkeelasLrqlkde...leecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekilee 269
                  +++ + + +l + la+  +l++e   + ++   +++klr eL + + k++ + ++l  l++e+++ + +i + +     l+e+++ +++++e+
  MMETSP1325-20131115|5117_1  51 RQSVADVHVELGRVLAQRCTLEEElakISQAGLGKVNKLRLELDQFKRKLTLELSNLRSLTDEKDHWTLEIRKEEVRTVPLRERVSRLKSQVER 144
                 445555555555555555566666333566666799**************************************************99998874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       918  (0.0671445); expected 273.4 (0.02)
Passed bias filter:                      568  (0.0415448); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.53
# Mc/sec: 1189.14
//
Query:       MMETSP1325-20131115|5120_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.61
# Mc/sec: 931.04
//
Query:       MMETSP1325-20131115|5122_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.55
# Mc/sec: 243.99
//
Query:       MMETSP1325-20131115|5123_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.047   12.3   0.0      0.055   12.1   0.0    1.1  1  PF14336.1 Domain of unknown function (DUF4392)


Domain annotation for each model (and alignments):
>> PF14336.1  Domain of unknown function (DUF4392)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     4e-06     0.055     167     206 ..      19      58 ..       3      75 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4e-06
   PF14336.1 167 lflkakeegiptiaiGDgGNEiGMGnvkdavkkhipngdd 206
                 l+ + +++g ++i+ G gG E+G   v++av++++p +++
  MMETSP1325-20131115|5123_1  19 LLADGESPGSESIGTGAGGAEAGARSVIEAVSRFLPVTAR 58 
                 55566779999************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.33s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 549.17
//
Query:       MMETSP1325-20131115|5124_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 334.66
//
Query:       MMETSP1325-20131115|5125_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 351.81
//
Query:       MMETSP1325-20131115|5126_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.045   13.1   8.2      0.049   13.0   5.7    1.0  1  PF03064.11 HSV U79 / HCMV P34
       0.68    9.4  12.9       0.71    9.3   8.9    1.0  1  PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
        1.9    6.5   7.3        1.8    6.6   5.1    1.0  1  PF06375.6  Bovine leukaemia virus receptor (BLVR)


Domain annotation for each model (and alignments):
>> PF03064.11  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   5.7   1.1e-05     0.049     147     209 ..       5      67 ..       1      70 [. 0.70

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.1e-05
  PF03064.11 147 aevaekvcralsrkksdderkkksakqkekRrdedskkkkedrkkkqeekrtsdedkrsgkgd 209
                 a++ +++  a+s   s+de   + + + +  + +d kk+ke rk k+e+k +++++  +g + 
  MMETSP1325-20131115|5126_1   5 AALKAAEVAAASTEASGDEALAPVGGSAKDNKRRDGKKEKEGRKEKKERKERENSKDVPGSKS 67 
                 455566777999999999987776654443344445899999999999888888877777664 PP

>> PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   8.9   0.00016      0.71     128     186 ..       8      62 ..       2      71 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00016
                 X..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..... CS
   PF08208.6 128 kppeelgseseesekektakkekeaeveeeekkekkkkkevkkekkekKsKkektekek 186
                 k++e  ++++e+s++e  a++  +a+ ++  +++ kk+ke +kekke+K+++++  k  
  MMETSP1325-20131115|5126_1   8 KAAEVAAASTEASGDEALAPVGGSAKDNK--RRDGKKEKEGRKEKKERKERENS--KDV 62 
                 56788889999999999999999999864..55666667777778888888777..222 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.1    0.0004       1.8     243     293 ..       7      60 ..       1      71 [. 0.36

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0004
   PF06375.6 243 leedevslavtvl..keaqeeereenkdakaeeskkssk.tkkkkqrkekeekk 293
                 l++ ev+ a+t +  +ea       +kd+k+ + kk  + +k kk+rke+e+ k
  MMETSP1325-20131115|5126_1   7 LKAAEVAAASTEAsgDEALAPVGGSAKDNKRRDGKKEKEgRKEKKERKERENSK 60 
                 444444443332200222222223334444433333322022233333333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       878  (0.0642188); expected 273.4 (0.02)
Passed bias filter:                      526  (0.0384728); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 302.70
//
Query:       MMETSP1325-20131115|5127_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|5129_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0015   17.4   0.0     0.0018   17.2   0.0    1.1  1  PF08610.5 Peroxisomal membrane protein (Pex16)
  ------ inclusion threshold ------
      0.045   13.5   0.1      0.054   13.2   0.1    1.1  1  PF11846.3 Domain of unknown function (DUF3366)


Domain annotation for each model (and alignments):
>> PF08610.5  Peroxisomal membrane protein (Pex16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.6e-07    0.0018     276     322 ..       2      48 ..       1      61 [. 0.86

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.6e-07
   PF08610.5 276 ereelkrrtkklalyllRgpfYdkytkskiesllrrlervPllglvg 322
                 er+e +rr++++a yllR p++d  +k+    + ++l  vPl+g ++
  MMETSP1325-20131115|5129_1   2 ERDEKERRKMLYACYLLRTPLWDTAVKPVAGTIHSALAPVPLVGGMA 48 
                 89**************************9999999999999998554 PP

>> PF11846.3  Domain of unknown function (DUF3366)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   7.9e-06     0.054      41      95 ..      21      80 ..      11      89 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 7.9e-06
   PF11846.3 41 arlrripfrva....lllravallvaiavlaymlsdyhrverltryegs.rpasieelrr 95
                + ++ + ++va     +l +v l++++a +a+m+  y+    ++ + ++ +p + ++++r
  MMETSP1325-20131115|5129_1 21 PLWDTAVKPVAgtihSALAPVPLVGGMASYAFMMLEYMQKHHFYTAARDwAPRKVKHRYR 80
                444444444444445*************************99976653313333333444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.61
# Mc/sec: 400.70
//
Query:       MMETSP1325-20131115|5131_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.059   12.9   0.0       0.12   11.9   0.0    1.6  1  PF04325.8  Protein of unknown function (DUF465)
      0.078   12.6   0.1       0.11   12.2   0.1    1.3  1  PF01253.17 Translation initiation factor SUI1


Domain annotation for each model (and alignments):
>> PF04325.8  Protein of unknown function (DUF465)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.7e-05      0.12       3      23 ..      36      56 ..      34      66 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.7e-05
   PF04325.8  3 tLeaeHeeLDkeIkaleanpv 23
                +  +++ +LDkeIk +e++ +
  MMETSP1325-20131115|5131_1 36 AVTNKYPQLDKEIKMMERRIA 56
                56789*************987 PP

>> PF01253.17  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.6e-05      0.11      13      53 ..      18      64 ..       6      76 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.6e-05
  PF01253.17 13 krrgrKtvTvvegleleei......dlkkllkalkkkfacggtvvkd 53
                +rr +K vT +++l+++        +l k  k + +++a+ g   k+
  MMETSP1325-20131115|5131_1 18 QRRLGKLVTQIDNLGAFMAvtnkypQLDKEIKMMERRIAVTGILHKK 64
                99*************877789999999999********999998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 511.53
//
Query:       MMETSP1325-20131115|5130_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        57  (0.0041691); expected 273.4 (0.02)
Passed bias filter:                       56  (0.00409596); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.35s 00:00:00.62 Elapsed: 00:00:00.49
# Mc/sec: 156.50
//
Query:       MMETSP1325-20131115|5134_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       575  (0.0420568); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|5132_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-13   50.8   0.0    1.4e-13   50.5   0.0    1.1  1  PF08811.6 Protein of unknown function (DUF1800)


Domain annotation for each model (and alignments):
>> PF08811.6  Protein of unknown function (DUF1800)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.0   9.9e-18   1.4e-13      91     164 ..     186     259 ..     145     260 .] 0.89

  Alignments for each domain:
  == domain 1    score: 50.5 bits;  conditional E-value: 9.9e-18
   PF08811.6  91 rllravysprqLrerlvdfwsnhfvvsaekglevralagayerdairphalGnFrdLLeavakspaMliYLdna 164
                 + + a+++p+qLr+r+++++s++ v   ++g++ ++     ++d++ +ha+Gn  d L++v+ sp+M++YL+ +
  MMETSP1325-20131115|5132_1 186 HNSIALKAPDQLRQRMAWALSQIYVAAPTDGQSGELEEWVTYYDIFVRHAFGNLLDVLREVSYSPIMGRYLTYV 259
                 556799********************999988888888889******************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 1175.57
//
Query:       MMETSP1325-20131115|5135_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.65
# Mc/sec: 416.60
//
Query:       MMETSP1325-20131115|5136_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|5137_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-16   59.1   0.0    4.5e-16   58.9   0.0    1.1  1  PF02597.15 ThiS family


Domain annotation for each model (and alignments):
>> PF02597.15  ThiS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   3.3e-20   4.5e-16       1      78 []      15      95 .]      15      95 .] 0.98

  Alignments for each domain:
  == domain 1    score: 58.9 bits;  conditional E-value: 3.3e-20
                EEECTEECHHCC....TEEEEESSHCBHHHHHHHHCCTTCHHHHTSSTCEEEETTEEEGTCTTTSB--SSSEEEEEEEB--- CS
  PF02597.15  1 vllfaelrelag....eeelelaegstvaelleaLgerypelaelerrvavavNgeivprlwldtelkdgDevailppVaGG 78
                vl+fa +re ag    e el  a++ t ael+  ++e yp+ a  ++ + +a+N+e++++ ++++ l+dgDeva++pp++GG
  MMETSP1325-20131115|5137_1 15 VLFFAAAREMAGtggaEVELSGADAHTTAELRTRIAELYPGTADVIPSITLALNQEYLSH-GEEATLNDGDEVALIPPISGG 95
                89************999999999*********************99**************.********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.74
# Mc/sec: 307.64
//
Query:       MMETSP1325-20131115|5138_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.74
# Mc/sec: 226.68
//
Query:       MMETSP1325-20131115|5139_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.098   12.4   1.3       0.14   12.0   0.9    1.2  1  PF06614.6 Neuromodulin


Domain annotation for each model (and alignments):
>> PF06614.6  Neuromodulin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.9     1e-05      0.14      86     133 ..       5      53 ..       2      58 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1e-05
   PF06614.6  86 dnsPslkadeaplkeeskkadvplltalaattpaaedata.kaaaqkeq 133
                 +nsP  +a+++p+   ++ a v  +t   ++ p ae+a   k ++ ++q
  MMETSP1325-20131115|5139_1   5 QNSPVPHAENTPVPAHKDAAMVTRITLTMSAXPDAEEAPVhKESPAPQQ 53 
                 6************************************964144555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|5143_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.35s 00:00:00.61 Elapsed: 00:00:00.44
# Mc/sec: 190.62
//
Query:       MMETSP1325-20131115|5140_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 277.47
//
Query:       MMETSP1325-20131115|5145_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        4.8    7.1  19.3        5.8    6.8  13.4    1.2  1  PF00992.15 Troponin


Domain annotation for each model (and alignments):
>> PF00992.15  Troponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  13.4   0.00042       5.8      22      84 ..       2      61 ..       1      70 [. 0.93

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00042
                HHCHHHHHHHCCCSXSXXXXX.XHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF00992.15 22 kkeeekekaLkerieklklsgasraelqeickklheriarleEerydieekvakkdaEiedlk 84
                +k++e+ ka +e  e+ k   a +ae q++++++ + +a+ eE +  +e+k ++++ E e++ 
  MMETSP1325-20131115|5145_1  2 AKAAEEAKAAAEAAEAAK---AAEAEKQRLAEEEAAAMAAEEEAKRVAEAKAEQERLEAEAKA 61
                58999*************...999**********************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1941  (0.141969); expected 273.4 (0.02)
Passed bias filter:                      873  (0.0638531); expected 273.4 (0.02)
Passed Vit filter:                       192  (0.0140433); expected 13.7 (0.001)
Passed Fwd filter:                        42  (0.00307197); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.46s 00:00:01.06 Elapsed: 00:00:00.69
# Mc/sec: 250.05
//
Query:       MMETSP1325-20131115|5146_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.28   10.4   1.8        0.4   10.0   1.2    1.3  1  PF11511.3 Intrinsic membrane protein PufX


Domain annotation for each model (and alignments):
>> PF11511.3  Intrinsic membrane protein PufX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.2   2.9e-05       0.4      28      47 ..      35      54 ..      26      59 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 2.9e-05
                -----------TTT---TTT CS
   PF11511.3 28 AgyAavfvlvllfllvalal 47
                Ag+Aav+++v+l  lv  ++
  MMETSP1325-20131115|5146_1 35 AGLAAVVIIVILWHLVYAYV 54
                9*********9999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       655  (0.0479081); expected 273.4 (0.02)
Passed bias filter:                      475  (0.0347425); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.44s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|5148_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.59
# Mc/sec: 134.03
//
Query:       MMETSP1325-20131115|5149_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-22   78.6   0.2    1.9e-08   33.7   0.0    3.5  3  PF00400.27 WD domain, G-beta repeat
    0.00013   21.6   0.0     0.0006   19.4   0.0    1.8  1  PF08662.6  Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
       0.13   10.8   0.0       0.16   10.6   0.0    1.2  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   6.6e-05       0.3      23      38 ..       4      19 ..       1      20 [. 0.88
   2 !   30.3   0.1   4.8e-11   2.2e-07       3      39 .]      26      65 ..      24      65 .. 0.95
   3 !   33.7   0.0   4.3e-12   1.9e-08       3      39 .]     114     150 ..     112     150 .. 0.96

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 6.6e-05
                STEEEEEETTSEEEEE CS
  PF00400.27 23 gpllasgSrDgtirlW 38
                 + lasg+ D+++ +W
  MMETSP1325-20131115|5149_1  4 ETQLASGGNDNKLFIW 19
                578************* PP

  == domain 2    score: 30.3 bits;  conditional E-value: 4.8e-11
                EEEEEESSSSSEEEEEEESS.STEEEEEE..TTSEEEEEE CS
  PF00400.27  3 ckatlrgHtspVtcvafspd.gpllasgS..rDgtirlWd 39
                +++ + +Ht++V ++a+sp+   llasg+  +D++ir W+
  MMETSP1325-20131115|5149_1 26 PVSRFNEHTAAVKAIAWSPHqHGLLASGGgtADRCIRFWN 65
                7889***********************************7 PP

  == domain 3    score: 33.7 bits;  conditional E-value: 4.3e-12
                 EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   3 ckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                  +atl+gHt  V  +a spdg+ +++g  D t+r W+
  MMETSP1325-20131115|5149_1 114 KVATLTGHTYRVLYLAMSPDGQTIVTGAGDETLRFWN 150
                 589*********************************7 PP

>> PF08662.6  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.3e-07    0.0006      33     169 ..       8     148 ..       1     153 [. 0.67

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 1.3e-07
   PF08662.6  33 ksyygetelylikekkkeievvelkkegp.ihdvaWspkskefaviyG.kmpakislfdlk...vnvisklkekkrNtifwspqgrlvllaGfgnlaGeleiydvkklkkiaka..easnatlvewspdgryvlTattsprlrv 169
                 +s    ++l+   + ++ + v + +++   ++++aWsp+++ ++   G +++++i++++         ++++++  N +   + ++lv + G+ +l  ++ ++    ++k+a+   + +   ++  spdg+ ++T      lr 
  MMETSP1325-20131115|5149_1   8 ASGGNDNKLFIW-TAQSTSPVSRFNEHTAaVKAIAWSPHQHGLLASGGgTADRCIRFWNTLtsvPLNCVDTGSQVCNLMWSRNVNELVSTHGY-SL-NQIIVWRYPFMSKVATLtgHTYRVLYLAMSPDGQTIVTGAGDETLRF 148
                 444555677777.55555555555555444*************9998879999******9523222345666666665554555666666666.45.49999999988888876214566778999********9876666665 PP

>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   3.4e-05      0.16     172     236 ..      26     105 ..      12     144 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 3.4e-05
  PF00248.16 172 gllelcaek.gvgiiaysplggGlltgkylseerkedkeprkd..............aqdaleelselakehgvslaqla 236
                  + ++ ++   v+ ia+sp ++Gll       +r  ++++                 ++ + + ++el++ hg+sl q++
  MMETSP1325-20131115|5149_1  26 PVSRFNEHTaAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTsvplncvdtgsqvcNLMWSRNVNELVSTHGYSLNQII 105
                 5555555634899*************999999999999888779********************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 860.73
//
Query:       MMETSP1325-20131115|5152_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0006   19.6   0.1    0.00066   19.5   0.1    1.0  1  PF01145.20 SPFH domain / Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   4.8e-08   0.00066      37     105 ..      20      92 ..       3      98 .. 0.67

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 4.8e-08
  PF01145.20  37 vvstrvqtldvsdesvtvptkDglnvtvdvtvryrv...sdakkliaav..........aqeeenlenllrrllesalrevl 105
                 ++ +++qt d+++  +++ ++D+++++v++tv++r+        ++++                ++ + + +l ++ l++++
  MMETSP1325-20131115|5152_1  20 FITLKIQTDDLEK--IEAASADNIIMRVNSTVVWRIvnvQ---TAATMAaetmastgrdG----DVTADIVKLRRDVLKQAI 92 
                 6778999999999..*********************6663...43333333356633333....444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       560  (0.0409596); expected 273.4 (0.02)
Passed bias filter:                      431  (0.0315243); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 452.14
//
Query:       MMETSP1325-20131115|5153_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       638  (0.0466647); expected 273.4 (0.02)
Passed bias filter:                      470  (0.0343768); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|5154_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-16   59.9   0.0    5.6e-16   58.3   0.0    1.8  1  PF00155.16 Aminotransferase class I and II
  ------ inclusion threshold ------
      0.072   11.6   0.0       0.19   10.1   0.0    1.7  2  PF04864.8  Allinase


Domain annotation for each model (and alignments):
>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.0   8.1e-20   5.6e-16      91     361 ..      11     322 ..       1     324 [. 0.76

  Alignments for each domain:
  == domain 1    score: 58.3 bits;  conditional E-value: 8.1e-20
                 SS--EEEEECS--TCHHHHHHH---EEEEEE-EETTTTEE-HHHHH...HHHTT--SS-E...EEE-SSS-S-------HHHHHHHHHHHHH..........T.T-EEEEEES-------.-HHHHHHHHHHH-S-..EEEEE--CCCC.TBGGG----EEE.E-HHHHHHHHHCCTTTS.-----CCHHHHCTSHHHHHH.HHHHHHHHHHHHHHHHHHCC.CC......-TCHHHH----EE-----HH..............HH........HCCH---BE--...........---EE-----TTTHHHHHH CS
  PF00155.16  91 npgdeilvpdptyasyknilrlsggevvryplyseedfhldleale...ealkeapegnkktkvvlvesphNPtGtvatleeleklldlakk..........y.nlllfvDeaYagfvfgsldavatranveeepn..llivgslsKaf.GlaGeRvGyilg.naavvsqlrklsrpfls.ssllqaavaaalsdallkqs.eleemrqrlqkrrkelrdeLael......glkvlasqsgmflltdlsae........takelskk........Lleevgvyvtpgtsftv...pgrlRitvAglteeeleelve 361
                  p+d++  p p y+ y++   + +g++ ++     + +  + e+l    +a +  pe ++k +v++++ p+NPtG+++t +e ++l ++ ++            ++ +++De+Y g  +++ +a +++a ++e+    +++v+s+sK + +++G R ++i++ na+ +  l+k++   +   s l+++ ++   d+l+ +  +++e  + +q r+  ++ +L+e+      g +  +s+++++++  +  +        t+ e+            + +vg++ +pg+ f++   + rlR+++A  + ++l  +++
  MMETSP1325-20131115|5154_1  11 GPDDVVATPLPAYSIYQQQTSMLRGTFTTFGGG--ALRVPTPESLRelfRATNCKPESSQKLRVLVLCLPNNPTGAMLTVDEARELCETLDElweqyyvcdpAgGFSVILDEVYVGITSKP-SA-SLLAYASERLRnaIFLVSSCSKGLgAMPGARAAWITApNADAIPELAKIQLVCTGnASTLSQVGLKGSLDFLRANPgQMDEIWRYYQVRTALVVRRLQEIsakfglGPIAEESEATFYVWCNFGSLprvagkseTDLEFTGFlkslcgdsATGYVGLAAVPGSAFEMpgsELRLRLSCAREDLADLSDAMR 322
                 577888888888888888888888888877621..222222333330003334456777799********************99999877653333333333336789***********94.44.4455555555567***********5589*********************9987779777888888888888887779***************************5555556677***********98888887744444333666888889999*************887779999999888888877766 PP

>> PF04864.8  Allinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   2.8e-05      0.19      94     142 ..      10      56 ..       3      92 .. 0.68
   2 ?   -2.8   0.0      0.24   1.7e+03      10      33 ..     209     232 ..     203     235 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 2.8e-05
   PF04864.8  94 skpvkvvaa.vPyysvykeqtslldsklykweGdaaayvkkknpeefiel 142
                 + p +vva+  P ys+y++qts+l+ +   + G a       +pe+  el
  MMETSP1325-20131115|5154_1  10 EGPDDVVATpLPAYSIYQQQTSMLRGTFTTFGGGALRVP---TPESLREL 56 
                 56677776439**********************997763...23333333 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.24
   PF04864.8  10 fleeyWkkkkertavvisgwhrls 33 
                  ++e W+  + rta+v++  +++s
  MMETSP1325-20131115|5154_1 209 QMDEIWRYYQVRTALVVRRLQEIS 232
                 67899999999***9999888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.56
# Mc/sec: 1416.79
//
Query:       MMETSP1325-20131115|5155_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   13.7   0.5      0.048   13.7   0.3    1.8  2  PF10631.4 Protein of unknown function (DUF2477)


Domain annotation for each model (and alignments):
>> PF10631.4  Protein of unknown function (DUF2477)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.25   3.4e+03      45      74 ..      63      92 ..      45     131 .. 0.58
   2 ?   13.7   0.3   3.5e-06     0.048      85     134 ..     186     236 ..     166     239 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.25
   PF10631.4 45 lpvgscilepvgllqtteapgpkgikgikg 74
                l +++   e v+ ++ + +  p g   + +
  MMETSP1325-20131115|5155_1 63 LIISAASSEIVSCFDGQAVSAPEGHASTAA 92
                555555566666666666666666544333 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 3.5e-06
   PF10631.4  85 qqpcnpyssgqrpagltyaglppagrgddiahh.ccccpccscchcprfcr 134
                 ++ ++ ++s+ +++ + ya +  a  gd +     ++c c+++c c r c 
  MMETSP1325-20131115|5155_1 186 RTDSRGITSSPKQSDVMYASVFAAASGDRVPPGgLIVCVCVRVCACVRVCV 236
                 556778899*********************865167899*********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1130.36
//
Query:       MMETSP1325-20131115|5163_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 493.37
//
Query:       MMETSP1325-20131115|5161_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        8.4    6.4  13.0       0.76    9.8   2.5    2.1  2  PF09440.5 eIF3 subunit 6 N terminal domain


Domain annotation for each model (and alignments):
>> PF09440.5  eIF3 subunit 6 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.5   5.5e-05      0.76      30     109 ..      12      89 ..       3      91 .. 0.78
   2 ?    3.0   2.2    0.0068        93      24      93 ..      85     153 ..      83     166 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 5.5e-05
   PF09440.5  30 ekellkaklellkkTnmvDyvadlekeleneeeipaelaekreevlkelkeleeevakilklledeevvknlrsdkkanl 109
                  k l + k ++ +   mv+ va++e+  e+++   +e +++++e++ + +   ++++ il+ l++e+ +++lr++k+a +
  MMETSP1325-20131115|5161_1  12 TKKLSRWKHKMSNSPFMVNLVAETERIDEEHQIRLHEEERRQQEIVRRQHA--AKQEIILRALQEESDLEALRREKRAIH 89 
                 4788999999999999********877766666777777777777766544..556789****************99876 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.0068
   PF09440.5  24 akeiydekellkaklellkkTnmvDyvadlekeleneeeipaelaekreevlkelkeleeevakilklle 93 
                 ++ i++e+  lka l+l +kTn    +  l ++ ++++ + ++ + +r+e + +l+ l++ + ++l+l++
  MMETSP1325-20131115|5161_1  85 KRAIHEEERRLKALLDL-EKTNGHRKADRLAAQRAEKQRHQTKREYRRKENMTTLASLQQRETEALRLKH 153
                 56788888888888885.6788888888888888888999999999999999999999999998888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1657  (0.121197); expected 273.4 (0.02)
Passed bias filter:                      505  (0.0369368); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 1038.42
//
Query:       MMETSP1325-20131115|5162_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       585  (0.0427882); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 928.59
//
Query:       MMETSP1325-20131115|5164_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-13   50.5   0.1    1.6e-07   31.2   0.1    2.1  2  PF00307.26 Calponin homology (CH) domain


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.8e-07    0.0024      76     107 ..       6      36 ..       2      38 .. 0.90
   2 !   31.2   0.1   1.2e-11   1.6e-07       1      71 [.      69     141 ..      69     142 .] 0.86

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.8e-07
                 HCT-TTTS-HHHHHTST-HHHHHHHHHHHHHH CS
  PF00307.26  76 klgvscvltledllysgnkknvlaflaeLfrr 107
                  +gv+ +l++ d++ +gn k++++fla+Lf++
  MMETSP1325-20131115|5164_1   6 RMGVQALLKPADIV-KGNTKLNMGFLAQLFNT 36 
                 48999999******.***************96 PP

  == domain 2    score: 31.2 bits;  conditional E-value: 1.2e-11
                 HHHHHHHHHHHHTTSTCTSSHS.....HHHHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSS.SHHHHHHHHHHHHH CS
  PF00307.26   1 edallrWinkvlekleqsrqve.....nlskdlsDGvaLaallhkycpdlvdlediskclke.svadsleNlqlale 71 
                 e+++ +W+n+++  +e + +v      nl+ +l++G+ L+++++++  + v+++++  ++k+ +  ++++N+++++e
  MMETSP1325-20131115|5164_1  69 ERTFRMWMNSLNISEE-ESPVGalyvdNLFASLCNGLPLLQVMDRMEAG-VNWKKV--HKKPkMRHHQIDNCNTVVE 141
                 7899********9885.3444456666*********************9.6*****..7677899********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 694.45
//
Query:       MMETSP1325-20131115|5167_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|5165_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       845  (0.0618051); expected 273.4 (0.02)
Passed bias filter:                      554  (0.0405208); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.51s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 465.18
//
Query:       MMETSP1325-20131115|5168_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 777.69
//
Query:       MMETSP1325-20131115|5170_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-11   44.1   0.0    1.8e-11   43.7   0.0    1.2  1  PF09696.5 Ctf8
  ------ inclusion threshold ------
      0.077   12.3   0.0       0.13   11.6   0.0    1.4  1  PF10419.4 TFIIIC subunit


Domain annotation for each model (and alignments):
>> PF09696.5  Ctf8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.0   2.7e-15   1.8e-11       7      94 ..      19      92 ..       7     108 .. 0.83

  Alignments for each domain:
  == domain 1    score: 43.7 bits;  conditional E-value: 2.7e-15
   PF09696.5  7 sglallElqGelelpeeeeaeeeesslsesesleetkiGkLefdkkdekkvtLyvGkkqrLtGevkkLkkPlavlkkrkkedeeeede 94
                 ++ ++ElqG+le  +           +es s + + +GkL+f   ++++++L++G  + L+GevkkL++Pl vl +++    ++ ++
  MMETSP1325-20131115|5170_1 19 REWSVVELQGNLEKVA----------GAESLSFDGLDVGKLKF---QQDTPVLTIG-PHILEGEVKKLPHPLLVLMREDGALMTTLET 92
                49***********998..........57899************...88899*****.********************98764444433 PP

>> PF10419.4  TFIIIC subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     2e-05      0.13       8      23 ..      53      68 ..      52      72 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2e-05
   PF10419.4  8 tdnPilkigdklyeGt 23
                +d+P+l+ig++++eG+
  MMETSP1325-20131115|5170_1 53 QDTPVLTIGPHILEGE 68
                69*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 591.75
//
Query:       MMETSP1325-20131115|5171_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 1202.79
//
Query:       MMETSP1325-20131115|5172_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 489.05
//
Query:       MMETSP1325-20131115|5174_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-23   80.6   0.0      1e-22   80.2   0.0    1.1  1  PF00754.20 F5/8 type C domain


Domain annotation for each model (and alignments):
>> PF00754.20  F5/8 type C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   0.0   7.3e-27     1e-22      27     129 .]      11     115 ..       3     115 .. 0.96

  Alignments for each domain:
  == domain 1    score: 80.2 bits;  conditional E-value: 7.3e-27
                 SSEECSSSSSTEEEEEEEEEEEEEEEEEEEE-BSTSTSEEEEEEEEEESSSSSEEEEEEC.....BEB-SSSSSSEEEEEEEEEEEEEEEEEEEEECCESS-EEEEEE CS
  PF00754.20  27 taWsskwgdapqwlqvdLgkekkitgvvtqgrqdggngyvksykiqysddgenWtevkde.....fegntdnstpvkntfdppikaryvrivptswksngniasraEl 129
                 +aW +  +d++q+lq+dL++++++tg++tqg  + +  +v+++k+++s+dg+ W + +       f++n dn+++v ++f+p++ +ryvr+ pt+w  +  ia+r+El
  MMETSP1325-20131115|5174_1  11 GAWLAGVKDTNQYLQMDLKEVTEVTGIATQGPAGESL-RVRQFKLEVSEDGKRWATAQLVdrsvlFPANADNKHVVAHRFSPSLLVRYVRVRPTKW--HSAIALRVEL 115
                 68*******************************9888.******************987799**********************************..********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 953.10
//
Query:       MMETSP1325-20131115|5173_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-31  108.7   9.0    5.1e-31  107.9   6.3    1.4  1  PF00487.19 Fatty acid desaturase
  ------ inclusion threshold ------
      0.057   12.4   0.0      0.086   11.8   0.0    1.2  1  PF13382.1  Adenine deaminase C-terminal domain


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.9   6.3   7.5e-35   5.1e-31      21     254 ..       2     223 ..       1     226 [. 0.82

  Alignments for each domain:
  == domain 1    score: 107.9 bits;  conditional E-value: 7.5e-35
  PF00487.19  21 vnlaHealHgalfrsrrlnrvlglllalllgissla.wrrsHlrhHhytgnaekDpdsalr.....rlirlaerrpllklrrllyrlllglllggllfllalerrklrkrrrrkglalllallilalllalaglllllsglgalllyvvplalaltvlllvnyleHyglet.ednnaardfyenqlltssn.segswvlnllsgnlnyHieHHlfPgvpwyrLpelhprlreelkehgvryn 254
                 +++aH+ +Hg     r+ +  ++++++ l g+ s++ w ++H++hH+ t+ ++ D d+        + +    + +l+k ++++++l +++l+  +++ ++     ++ ++            +la+++ +  l+ l  +l+a+ l ++++a+++tv        H  +++  d +++ d+ e ql+ +++  ++++v+ +lsg++ny+ieHHlfP +p+y++p+l+++l++++keh++ y+
  MMETSP1325-20131115|5173_1   2 GWIAHDYTHG-----RGKWCSFMRGFGELCGGMSTTwWSDKHNLHHALTNVVGIDEDLMVDpalylWQPAPENDSWLRKIQHWYWALPYSALFAIWRIDSFKVVLNRKLNGEL--------FRLLAHYAIWSMLFPLKVFLPAIILSGLLTATIVTVS-------HISEDLfFDGPHKVDYVEAQLRSTRDfKCSNPVFEYLSGGMNYQIEHHLFPIMPRYKYPALQKVLMQFAKEHNIEYR 223
                 79********.....9999999999999967777776****************6655555577766699999999*****************999999888888887777655........4555555555555555544466666666666665554.......555577799****************999**********************************************998 PP

>> PF13382.1  Adenine deaminase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.3e-05     0.086      43      69 ..      15      41 ..       4      59 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.3e-05
                E---EE--------EEES--TTT--EE CS
   PF13382.1 43 glglvkgfglkkgAiAssvahDshnii 69
                 + +++gfg  +g++++++ +D+hn+ 
  MMETSP1325-20131115|5173_1 15 WCSFMRGFGELCGGMSTTWWSDKHNLH 41
                5789*********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1109.89
//
Query:       MMETSP1325-20131115|5175_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.4    8.4   5.4        2.6    7.6   3.8    1.5  1  PF12436.3 Ubiquitin-specific protease 7


Domain annotation for each model (and alignments):
>> PF12436.3  Ubiquitin-specific protease 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.8   0.00019       2.6      12      28 ..     144     160 ..     142     160 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00019
   PF12436.3  12 rleeEreerErrrKERe 28 
                 +++++r+e E+rr+ER+
  MMETSP1325-20131115|5175_1 144 KAAWDRAEAEARRRERQ 160
                 899*************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1004.43
//
Query:       MMETSP1325-20131115|5177_1  [L=369]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-56  188.8   0.0    9.2e-56  188.3   0.0    1.1  1  PF00326.16 Prolyl oligopeptidase family
    6.6e-11   42.0   1.1    7.2e-09   35.3   1.7    2.1  2  PF02129.13 X-Pro dipeptidyl-peptidase (S15 family)
    7.2e-10   39.0   0.8    9.8e-10   38.5   0.1    1.6  2  PF12697.2  Alpha/beta hydrolase family
    1.2e-07   31.4   0.0    2.2e-07   30.6   0.0    1.5  1  PF12695.2  Alpha/beta hydrolase family
    3.4e-05   23.2   0.0    5.1e-05   22.7   0.0    1.4  1  PF00756.15 Putative esterase
    0.00023   20.6   0.0    0.00029   20.3   0.0    1.3  1  PF00561.15 alpha/beta hydrolase fold
    0.00031   19.9   0.0    0.00077   18.6   0.0    1.6  1  PF01738.13 Dienelactone hydrolase family
  ------ inclusion threshold ------
      0.022   14.0   0.0       0.56    9.4   0.0    2.1  2  PF02230.11 Phospholipase/Carboxylesterase
      0.034   12.5   0.2        0.1   10.9   0.2    1.8  1  PF05448.7  Acetyl xylan esterase (AXE1)
      0.036   13.5   0.0      0.068   12.6   0.0    1.4  1  PF07859.8  alpha/beta hydrolase fold
      0.058   11.8   0.0       0.08   11.3   0.0    1.1  1  PF05577.7  Serine carboxypeptidase S28


Domain annotation for each model (and alignments):
>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.3   0.0   7.4e-59   9.2e-56       5     209 ..     115     311 ..     111     314 .. 0.98

  Alignments for each domain:
  == domain 1    score: 188.3 bits;  conditional E-value: 7.4e-59
                 HHHHHHHH----EEEE----------TTT----GGGGHHHHHHHHHHHHHHHH-----GGGEEE--------HHHHHHHH-GGG---EEEE-----TTTGGGS-..---GGGGT---TTSHHH.HHHHHHH-GGG-------EEEEEETT-SSS-THHHHHHHHHHH..--SEEEEEES---------HHHHHHHHHHHHHHHHH CS
  PF00326.16   5 selqlladrGyvvvvanirGsggyGekwhdagkrklgqnefdDfiaaaealakegyvdpdrlaitGgSyGGylvgaalnqrpdlFkaavaqvgvvdwltymsdtsllteaeymeygnpeeneegyeelspyspadnvkaypplllihGeeDdrvppaealklvaaLqkagknvlllifpdegHgigkprakveelarllaFllka 209
                  + q+l+++G+ vv +++rGs+ +G+ ++  ++ k+g++e+dD++a++e+++ eg++d++r+ai G+SyGGy++++al++rpd+F+aav++++v+dw+ y++    +te +ym+ +++  n+egy + s++++++   ++ +lll+hG+ D++v + +++++++ L  a k+++ll fp+e+Hg ++p++++   +r+laFl+++
  MMETSP1325-20131115|5177_1 115 LRSQFLRAQGFCVVKVDNRGSDRRGHVFEVPIRYKMGSVEVDDQVAGVEYAVTEGIADKERVAISGWSYGGYMALTALAKRPDVFHAAVSGAPVTDWRFYDTC---YTE-RYMGLPQE--NQEGYATSSTLAHLEG--IEGSLLLCHGLIDENVLFRNSAMVINGLIAARKKYELLAFPNERHGPRRPGDRAFLEERILAFLQDY 311
                 5789***************************************************************************************************...***.****9986..****************..****************************************************************987 PP

>> PF02129.13  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   1.7   5.8e-12   7.2e-09       1     139 [.      67     212 ..      67     228 .. 0.86
   2 ?    3.5   0.0     0.029        36     211     253 ..     229     272 ..     215     289 .. 0.76

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 5.8e-12
                 --.-EEEEEEEEE....TTSSSBEEEEEEESS-..TTH.HHHHHCTCHHCCH...HHHHC---EEEEEE----TT------TT.....TCCHHHHHHHHHHHHHHC.TTBE-EEEE---TT---HHHHHTTS--TTB-EBEEBSB-SBCH CS
  PF02129.13   1 DG.vrLavdiyrP..etkskkklPvlltrtpYn..ksdelaatlasalgekelqdkafvarGYavVvvdvrGtgaSeGeftvg.....sedevedgadvidWlakq.pwsnGkVGmtGiSYdGttqlaaaatgvpalkaivpesaisdly 139
                 DG v L+  iy P     +++++P+++    Y+     ++ +++a++ g+  l ++ + a+G+ vV vd rG+     +f+v      ++ ev+d ++ ++ ++ +    + +V++ G SY+G+++l a+a++++   a+v+ ++++d+ 
  MMETSP1325-20131115|5177_1  67 DGaVTLQGAIYKPdpAVWGEGPWPCVVAT--YGgpHVMTITNSWAMTGGD--LRSQFLRAQGFCVVKVDNRGSDRRGHVFEVPirykmGSVEVDDQVAGVEYAVTEgIADKERVAISGWSYGGYMALTALAKRPDVFHAAVSGAPVTDWR 212
                 788999999****999999*******964..7764333456666655554..56667889*************9988888888999999*****************9*****************************************95 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.029
                 SSHHHHTTBHGGGHHG--SEEEEEE--B-SSS-.HHHHHHHHHH CS
  PF02129.13 211 ydafwkernlsedadkvkvpvllvsGwnDwnvk.rgviklyeal 253
                 +++ ++  ++  ++++++ ++ll +G+ D+nv+ r++  + + l
  MMETSP1325-20131115|5177_1 229 NQEGYATSSTLAHLEGIEGSLLLCHGLIDENVLfRNSAMVINGL 272
                 44556777777899******************988876665555 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       6.4   7.9e+03     184     205 ..      37      58 ..      16      73 .. 0.46
   2 !   38.5   0.1   7.9e-13   9.8e-10      20     107 ..     119     276 ..     105     357 .. 0.70

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 6.4
                 -----HHHHHHHHHHHHHSTTE CS
   PF12697.2 184 geaDrvvppeearrlaealpga 205
                 + +D ++++  + +la  l   
  MMETSP1325-20131115|5177_1  37 AIHDAAAADPRVLELASSLTPP 58 
                 2223333333333333333333 PP

  == domain 2    score: 38.5 bits;  conditional E-value: 7.9e-13
                 HH.TTTSEEEEE-----------S.........S--HHHHHHHHHHHHHH--...--EEEE--------HHHHHH----.EEEEEEE------STT.............................................................- CS
   PF12697.2  20 aL.aagyrvvapDlpGhGrSdrppd......ydpdtledlaadlaalldalgl..rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpas.............................................................a 107
                 +L a+g+ vv +D +G  r  +  +       +   ++d++a ++ ++++  +  ++v + G+S+Gg +al a+a+rpd +++ v  +p+ ++ +                                                              +
  MMETSP1325-20131115|5177_1 119 FLrAQGFCVVKVDNRGSDRRGHVFEvpirykMGSVEVDDQVAGVEYAVTEGIAdkERVAISGWSYGGYMALTALAKRPDVFHAAVSGAPVTDWRFYdtcyterymglpqenqegyatsstlahlegiegslllchglidenvlfrnsamvingliaaR 276
                 78569**************9998887777664456679*******99999333569***********************************6555588888888888888888877777777777777777777777777766666655555555441 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   1.8e-10   2.2e-07      20     141 ..     118     289 ..     105     301 .. 0.65

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 1.8e-10
   PF12695.2  20 ealakrgfavvavdlpghgasegaa...................aakrvl...aadlldleriilvGhSlGGgvalelagrd.drvkglvllap......f......................pdgedlakltlpvllihGtrDgvv...ppeeaeklakalpgdaelvviegasH 141
                 ++l ++gf vv vd++g+ ++ ++                             +++ +d er+++ G+S+GG++al++ +++ d + ++v  ap      +                       + ++l  ++  +ll hG  D+ v   + + + + + a+++++el+ +++  H
  MMETSP1325-20131115|5177_1 118 QFLRAQGFCVVKVDNRGSDRRGHVFevpirykmgsvevddqvagV----EyavTEGIADKERVAISGWSYGGYMALTALAKRpDVFHAAVSGAPvtdwrfYdtcyterymglpqenqegyatsSTLAHLEGIEGSLLLCHGLIDENVlfrNSAMVINGLIAARKKYELLAFPNERH 289
                 689999************998444444477766666444433321....13334555599*****************999995666777777776665541555555556665554444432211234444455888888888888844333333334444445566666666655 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   4.1e-08   5.1e-05     114     154 ..     173     243 ..     165     364 .. 0.66

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 4.1e-08
                 ---EEEE--THHHHHHHHHHHH-TTT-SEEEEES----TT..............................C CS
  PF00756.15 114 pdgravaGqSmGGlgALilalkhpdrFgsvssfSpivnps..............................n 154
                 +++ a+ G S GG++AL++ +k+pd F  + s +p+ + +                              +
  MMETSP1325-20131115|5177_1 173 KERVAISGWSYGGYMALTALAKRPDVFHAAVSGAPVTDWRfydtcyterymglpqenqegyatsstlahlE 243
                 3338****************************999977666666666555555555555555555555550 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   2.3e-07   0.00029      26      79 ..     154     209 ..     125     316 .. 0.84

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 2.3e-07
                 SHHHHHHHHHHHHHHSTSSS..EEEEE-B---HHHHHHHHHCGGGEEEEEEESB-- CS
  PF00561.15  26 ttddlardleavldalglkk..ltlvGhSmGGmialayaaeypdrvkamvllgtva 79 
                  +dd ++ +e+ + +   +k  +++ G+S+GG +al+++a+ pd + a+v+ ++v 
  MMETSP1325-20131115|5177_1 154 EVDDQVAGVEYAVTEGIADKerVAISGWSYGGYMALTALAKRPDVFHAAVSGAPVT 209
                 5677777777777777888889*****************************99984 PP

>> PF01738.13  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   6.2e-07   0.00077      77     198 ..     154     299 ..     117     316 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 6.2e-07
  PF01738.13  77 avlddlkaainylkslpevstkkvgvvGfClGGalall.lAaenpevdaavafYG........................altlekpleeaakikapilahlgeeDpfipaeaaedleealakankdlelkiYpgagHaFaadsresy 198
                 +v+d++ a ++y+ +    ++++v++ G+  GG +al  lA++ + + aav+  +                        +   +++l+  + i++++l  +g  D+ +   +   +++ l++a k++el  +p+  H+  +++++++
  MMETSP1325-20131115|5177_1 154 EVDDQV-AGVEYAVTEGIADKERVAISGWSYGGYMALTaLAKRPDVFHAAVSGAPvtdwrfydtcyterymglpqenqeGYATSSTLAHLEGIEGSLLLCHGLIDENVLFRNSAMVINGLIAARKKYELLAFPNERHGPRRPGDRAF 299
                 455555.99***************************972555558899999966677888888************999977899*****************************************************9877777755 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00045      0.56      94     128 ..     162     197 ..     157     209 .. 0.81
   2 ?    2.2   0.0     0.074        92     157     198 ..     248     289 ..     234     292 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00045
  PF02230.11  94 idaelkkg.ipssriiigGFSqGaalalylaltspk 128
                 +++ +++g  +++r++i G S G+ +al +  + p 
  MMETSP1325-20131115|5177_1 162 VEYAVTEGiADKERVAISGWSYGGYMALTALAKRPD 197
                 5677888844789***************99888776 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.074
  PF02230.11 157 pilqlHgeeDevvplalgkaakellktllnkvelksyeglgH 198
                 + l++Hg  De v ++ ++++ + l+++ +k+el  +++  H
  MMETSP1325-20131115|5177_1 248 SLLLCHGLIDENVLFRNSAMVINGLIAARKKYELLAFPNERH 289
                 568899999999999999999999999999888888887766 PP

>> PF05448.7  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   8.4e-05       0.1     158     200 ..     157     199 ..      61     214 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8.4e-05
                 HHHHHHHHHHCSTTB-TTG---B-------HHHHHHHH-S--S CS
   PF05448.7 158 DavrlveivlsldevDeervvvlGasqGGalalavaaleprvk 200
                 D v  ve ++     D+erv++ G+s GG +al + a  p+v 
  MMETSP1325-20131115|5177_1 157 DQVAGVEYAVTEGIADKERVAISGWSYGGYMALTALAKRPDVF 199
                 566778888888899******************9988887764 PP

>> PF07859.8  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.4e-05     0.068      49     112 ..     155     211 ..     152     242 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.4e-05
                 HHHHHHHHHHHHHTTTTHTCCCCEEEEE-------HHHHHHHHHHH-----EEEEEEES----T CS
   PF07859.8  49 vedalaalrwlaeqawelgadpsrivvaGdSaGGnLaaavalrardegepeiaaqvliyPgtdl 112
                 v+d +a +++ +++     ad++r+++ G S GG +a+ ++++  d       a+v   P+td 
  MMETSP1325-20131115|5177_1 155 VDDQVAGVEYAVTEG---IADKERVAISGWSYGGYMALTALAKRPDV----FHAAVSGAPVTDW 211
                 688888888888884...599****************9988877775....7777777777766 PP

>> PF05577.7  Serine carboxypeptidase S28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.5e-05      0.08     109     149 ..     170     209 ..     144     225 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 6.5e-05
   PF05577.7 109 lsssskwivfGgSYsgsLaawaRkkyPelvvgavaSSaPll 149
                 +++++++ + G SY+g +a  a +k P++  +av S aP++
  MMETSP1325-20131115|5177_1 170 IADKERVAISGWSYGGYMALTALAKRPDVFHAAV-SGAPVT 209
                 678999**********************999998.568875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.56
# Mc/sec: 1551.33
//
Query:       MMETSP1325-20131115|5178_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|5176_1  [L=1978]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-28   99.8   0.0    1.9e-15   57.1   0.0    2.6  2  PF00005.22 ABC transporter
    3.5e-28   98.5  53.4      2e-18   66.4   7.3    4.3  4  PF12698.2  ABC-2 family transporter protein
      2e-24   86.9   0.1    7.3e-09   35.8   0.0    4.3  4  PF13304.1  AAA domain
    3.4e-07   29.5   1.9     0.0044   16.4   0.2    2.5  2  PF13555.1  P-loop containing region of AAA domain
    3.1e-06   27.5   0.7     0.0012   19.1   0.0    2.3  2  PF13476.1  AAA domain
    3.1e-05   23.1   0.1        1.2    8.1   0.0    3.9  3  PF02463.14 RecF/RecN/SMC N terminal domain
    0.00051   19.0   0.0        1.1    8.1   0.0    3.2  3  PF13175.1  AAA ATPase domain
      0.001   18.1   0.4       0.58    9.2   0.1    2.3  2  PF03193.11 Protein of unknown function, DUF258
  ------ inclusion threshold ------
      0.011   15.7   1.0         17    5.5   0.0    4.2  4  PF00910.17 RNA helicase
      0.013   15.0   0.3        5.3    6.4   0.0    2.7  2  PF13604.1  AAA domain
      0.014   13.7   0.5        1.1    7.5   0.0    2.2  2  PF05783.6  Dynein light intermediate chain (DLIC)
      0.022   14.9   0.1          6    7.1   0.0    2.8  2  PF13191.1  AAA ATPase domain
      0.028   13.7   3.8       0.49    9.6   0.3    2.3  2  PF00448.17 SRP54-type protein, GTPase domain
       0.03   14.6   0.0        7.1    7.0   0.0    2.5  2  PF08477.8  Miro-like protein
      0.041   13.2   0.7        2.6    7.3   0.0    3.1  3  PF01695.12 IstB-like ATP binding protein
      0.049   13.4   0.0        7.2    6.4   0.0    3.6  3  PF13558.1  Putative exonuclease SbcCD, C subunit
      0.052   13.5   1.9        9.3    6.2   0.1    3.4  2  PF13401.1  AAA domain
       0.07   11.7   0.2       0.65    8.5   0.0    2.1  2  PF03215.10 Rad17 cell cycle checkpoint protein
       0.11   12.2   1.1         19    4.9   0.0    3.0  3  PF13671.1  AAA domain
       0.22   11.4   0.0         26    4.7   0.0    2.5  2  PF01926.18 50S ribosome-binding GTPase
       0.26   11.1   1.1         14    5.5   0.0    2.5  2  PF13521.1  AAA domain
       0.44    9.5   0.3         27    3.6   0.0    2.4  2  PF06414.7  Zeta toxin
       0.52    9.9   1.7         16    5.1   0.1    2.3  2  PF01935.12 Domain of unknown function DUF87


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.0   3.1e-18   1.9e-15       1     118 []     572     692 ..     572     692 .. 0.91
   2 !   40.2   0.0   5.6e-13   3.3e-10       1     117 [.    1477    1596 ..    1477    1597 .. 0.88

  Alignments for each domain:
  == domain 1    score: 57.1 bits;  conditional E-value: 3.1e-18
                 HHHHHHHTTSS------EEE-...--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S--.....-HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievd.ndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekk.....tdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 +T + +ltg+l+pt+g+ +v  +++    +  ++++r   g++pq+  lf  lt  e + ++ + k      ++++ +++l+++ l++++d     +LSgG+k++v+ A al  + ++++LDEPt+
  MMETSP1325-20131115|5176_1 572 TTTISMLTGLLTPTSGDAKVYgHSI---AD-GMATIRrmTGVCPQHDILFDYLTTGEHIEFFARLKGatlqeMEREKTAMLREFELEDRKDY-FSFGLSGGMKRKVCVAIALTGDTRFVVLDEPTA 692
                 799*****************94344...33.34445557********************9999998899*99****************9999.********************************6 PP

  == domain 2    score: 40.2 bits;  conditional E-value: 5.6e-13
                  HHHHHHHTTSS------EEE-...--BGGGB-HHHHH.EEEE-------.--BHHHHHH----S--.....-HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTT CS
                  xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22    1 STLlklltgelkptegeievdn.drkdlesdkleklr.igyipqdpllfpeltvrenldmakeekk.....tdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPt 117 
                  ST + +lt++++pt ge  v++ ++   +++ +++ + +g++ qd++l  +l++ + l  + +            ie++l  v l  ++dk   ++LSgG+k++++   al+ +p ++l+DEP 
  MMETSP1325-20131115|5176_1 1477 STTVSMLTRHTEPTRGEGLVKGySV---RDRFVDAAKhMGVVTQDNTLYSSLSCIDHLELFARVRGvpedeIGGLIEDILVVVELGPHKDK-ASYKLSGGMKRKLCTSLALIGNPSVVLMDEPS 1596
                  99*******************4344...4555555557***********99999999988877655887778899***************9.*******************************7 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3  11.5   2.9e-13   1.7e-10     166     286 ..     176     298 ..     171     306 .. 0.78
   2 !   11.6   0.2   0.00015     0.088     298     344 .]     413     460 ..     406     460 .. 0.91
   3 !   66.4   7.3   3.3e-21     2e-18     151     293 ..    1132    1285 ..    1049    1371 .. 0.78
   4 ?   -3.0   1.2       4.2   2.5e+03     273     291 ..    1799    1817 ..    1792    1834 .. 0.71

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 2.9e-13
   PF12698.2 166 llfilifigaliialsiveEkesrikelqlvsgvspfaywlskilgdllvgliqlllilll.....afglegipfgnlllllllfllfglayialgyllsslfksestaqlvisilill.lsgfflg 286
                 l   +++i++ +++  +v+Ek +++kel+ +sg+sp  + ls++++  +++l+++ll+ +l     +++   ++   ++ ++ l+ ++++a++a+   +ss+f+++sta + +++li++ l+++fl 
  MMETSP1325-20131115|5176_1 176 LPVAFVLIPVGQTV-VLVTEKDRGLKELMTMSGLSPAIFSLSWFIAESVISLVSSLLLAILarsteILK--VVDGVTFFCFFTLLWFYMMASAAFVSSISSIFSKPSTAAI-CTFLIYVaLCIVFLT 298
                 44566777777666.5899**************************************999955555555..4666677888899999*******************99964.555554304444433 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00015
   PF12698.2 298 kwifsiiPffslgdgllriitgd.lseillsliiLllfavvylllall 344
                 + ++++iP+f+l++g l ++t d    ++  +++L++ +++y++l+++
  MMETSP1325-20131115|5176_1 413 QRALCLIPTFALMYGELGLNTSDpVDGFGAVIGYLVADIIIYVILGWY 460
                 57899****************99777788****************996 PP

  == domain 3    score: 66.4 bits;  conditional E-value: 3.3e-21
   PF12698.2  151 l.......fnksknyasflaglllfilifigaliialsiveEkesrikelqlvsgvspfaywlskilgdllvgliqlllilllafglegipfgnl...llllllfllfglayialgyllsslfksestaqlvisilil....llsgfflglfplesl 293 
                          ++  +++a++la+l++ +  +++  ++a  +v+E+ ++++ l+ v+g++p+a+w++ + gd++++li++++i l++ g   ++++n+   ++l++++llfg  + +++y+ls+ fk++++a++++++++l    l++++ l+++++++l
  MMETSP1325-20131115|5176_1 1132 PkrrchqfQELYDGVADVLASLIFSVGWLFSPGFVAEVLVSERDCKLRNLLTVMGCDPRAFWTGQVAGDAVLYLIPTIIIWLYVGG---LGLENWlktGSLFWMMLLFGAEMHSFAYFLSFGFKTSASAMAFTPVITLgliiLPIFVVLVIVLTQNL 1285
                  14455543444489999****8887777777778******************************************9887776666...77776655599************************************997644344444444445555 PP

  == domain 4    score: -3.0 bits;  conditional E-value: 4.2
   PF12698.2  273 isililllsgfflglfple 291 
                  ++i++++++++f++++++ 
  MMETSP1325-20131115|5176_1 1799 LFIFGFTMMFIFGPTWFFG 1817
                  5778888888888887764 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.018        11       2      23 ..     561     582 ..     560     605 .. 0.85
   2 !   35.8   0.0   1.2e-11   7.3e-09     213     298 ..     638     721 ..     611     724 .. 0.81
   3 ?    6.5   0.0      0.01       6.1       3      19 ..    1467    1483 ..    1465    1508 .. 0.86
   4 !   33.3   0.0   7.1e-11   4.2e-08     224     297 ..    1556    1625 ..    1514    1628 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.018
   PF13304.1   2 nviiGpNgsGKSnlLkaldflf 23 
                  ++ G Ng+GK++ ++ l +l+
  MMETSP1325-20131115|5176_1 561 FALLGHNGAGKTTTISMLTGLL 582
                 5899*************99885 PP

  == domain 2    score: 35.8 bits;  conditional E-value: 1.2e-11
   PF13304.1 213 dedllek..dviflkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHS 298
                 +e ++ek  ++++++ +d +++  + lS G+kr    + al  +    +++++DEp +gL+P + r+l+  l  l++ g ++++TTH 
  MMETSP1325-20131115|5176_1 638 QEMEREKtaMLREFELEDRKDYFSFGLSGGMKRKVCVAIALTGDT---RFVVLDEPTAGLDPGARRKLWATLALLKR-GRTVLLTTHY 721
                 3333333669999********************866666666666...*****************************.*********5 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.01
   PF13304.1    3 viiGpNgsGKSnlLkal 19  
                  ++ GpNg+GKS+  + l
  MMETSP1325-20131115|5176_1 1467 GLLGPNGAGKSTTVSML 1483
                  799********987766 PP

  == domain 4    score: 33.3 bits;  conditional E-value: 7.1e-11
   PF13304.1  224 lkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTH 297 
                  ++ g  ++   + lS G+kr l   +al+ ++   sv+l DEp +gL+P   r+l++++ e+ +    +i+TTH
  MMETSP1325-20131115|5176_1 1556 VELGPHKDKASYKLSGGMKRKLCTSLALIGNP---SVVLMDEPSAGLDPVSRRNLWRIISETMK-SRSVILTTH 1625
                  55555566677889******999999999999...************************99999.9******** PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   7.4e-06    0.0044      17      51 ..     553     586 ..     546     594 .. 0.84
   2 !   11.9   0.0   0.00018      0.11      17      40 ..    1458    1480 ..    1452    1485 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 7.4e-06
   PF13555.1  17 veidpkgkntlltGasGsGKSTllDAiqtlLvpak 51 
                 v+++ +g+ ++l G++G+GK+T +  ++ lL+p++
  MMETSP1325-20131115|5176_1 553 VKMH-DGEIFALLGHNGAGKTTTISMLTGLLTPTS 586
                 5665.6779************************87 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00018
   PF13555.1   17 veidpkgkntlltGasGsGKSTll 40  
                  ++++ kg+ + l G++G+GKST +
  MMETSP1325-20131115|5176_1 1458 LRVK-KGECMGLLGPNGAGKSTTV 1480
                  5665.667899***********97 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0     2e-06    0.0012      17      52 ..     555     591 ..     533     671 .. 0.70
   2 ?    6.4   0.1     0.015       8.8      25      36 ..    1469    1480 ..    1456    1484 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 2e-06
   PF13476.1  17 F.skgltlItGpNGsGKTTildAiclaLygktsrlkk 52 
                   +  ++++ G+NG+GKTT +  ++ +L+  +++ k 
  MMETSP1325-20131115|5176_1 555 MhDGEIFALLGHNGAGKTTTISMLTGLLTPTSGDAKV 591
                 34446***********************987655544 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.015
   PF13476.1   25 tGpNGsGKTTil 36  
                   GpNG+GK+T  
  MMETSP1325-20131115|5176_1 1469 LGPNGAGKSTTV 1480
                  7*********86 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.13        79      25      42 ..     559     576 ..     531     590 .. 0.82
   2 ?    4.2   0.0     0.033        19     137     213 ..     664     736 ..     637     741 .. 0.82
   3 !    8.1   0.0     0.002       1.2     136     198 ..    1568    1626 ..    1452    1644 .. 0.75

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.13
                 SEEEE--------HHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
  PF02463.14  25 sftaivGpNGSGKsnvld 42 
                 ++ a++G+NG+GK+  + 
  MMETSP1325-20131115|5176_1 559 EIFALLGHNGAGKTTTIS 576
                 56789********98765 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.033
                 -----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEEE--EE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 137 LSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadklvgvtk 213
                 LSgG k  v +    Ai     + +++lDe  a LD   ++k+   l   ++   ++ +++  +  e     vg++k
  MMETSP1325-20131115|5176_1 664 LSGGMKRKVCV----AIALTGDTRFVVLDEPTAGLDPGARRKLWATLALLKRGRTVLLTTHYMDEAEVLGDRVGIMK 736
                 67777765544....555678899*******************9999999999999999998888777777777765 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.002
                  G-----HH.H.HHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S- CS
                  xxxxxxxx.x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14  136 lLSgGekt.L.valaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislr 198 
                  +LSgG k  L ++laL+         +++l+De  a LD   ++++ +++ e+ k+  +i +++ 
  MMETSP1325-20131115|5176_1 1568 KLSGGMKRkLcTSLALI------GNPSVVLMDEPSAGLDPVSRRNLWRIISETMKSRSVILTTHL 1626
                  68888664131345555......5667899************************99999999985 PP

>> PF13175.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0      0.02        12      25      43 ..     556     584 ..     535     652 .. 0.76
   2 ?    1.9   0.0      0.14        84     372     410 ..     684     720 ..     677     722 .. 0.91
   3 !    8.1   0.0    0.0018       1.1     372     410 ..    1589    1625 ..    1580    1626 .. 0.93

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.02
   PF13175.1  25 n.....viiGeNgsGKttILeal.....e 43 
                        + G+Ng+GKtt ++ l      
  MMETSP1325-20131115|5176_1 556 HdgeifALLGHNGAGKTTTISMLtglltP 584
                 34444499************999544440 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.14
   PF13175.1 372 IlliDEPeahlhptlqkellefLkelakknniqiiitTH 410
                 ++++DEP a l+p ++++l   L  l +  + ++++tTH
  MMETSP1325-20131115|5176_1 684 FVVLDEPTAGLDPGARRKLWATLALLKR--GRTVLLTTH 720
                 899********************99999..********9 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.0018
   PF13175.1  372 IlliDEPeahlhptlqkellefLkelakknniqiiitTH 410 
                  ++l+DEP a l+p  +++l + + e +k     +i+tTH
  MMETSP1325-20131115|5176_1 1589 VVLMDEPSAGLDPVSRRNLWRIISETMK--SRSVILTTH 1625
                  99**************************..********* PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1   0.00097      0.58      22      57 ..     544     580 ..     531     607 .. 0.85
   2 !    6.6   0.0    0.0059       3.5      33      60 ..    1460    1488 ..    1443    1518 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00097
                 HHTT-HHHHHHCTT.SBEEEE-------HHHHHHH-- CS
  PF03193.11  22 tkegleelaellkd.ktsvlvGqSGvGKSsLinallp 57 
                 t+ ++++l  +++d ++ +l+G+ G+GK++ i +l++
  MMETSP1325-20131115|5176_1 544 TNVSVDSLDVKMHDgEIFALLGHNGAGKTTTISMLTG 580
                 677899999999998*****************99986 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0059
                  CTT.SBEEEE-------HHHHHHH----- CS
  PF03193.11   33 lkd.ktsvlvGqSGvGKSsLinallpeld 60  
                  +k+ +++ l+G+ G+GKS+ + +l+ +++
  MMETSP1325-20131115|5176_1 1460 VKKgECMGLLGPNGAGKSTTVSMLTRHTE 1488
                  44448899***************998764 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.63   3.8e+02       3      23 ..     563     583 ..     561     603 .. 0.76
   2 ?   -0.0   0.0       1.5   8.9e+02      17      53 ..     988    1026 ..     985    1048 .. 0.83
   3 ?    5.5   0.0     0.028        17       3      24 ..    1468    1489 ..    1466    1524 .. 0.69
   4 ?    3.1   0.0      0.16        93      56      91 ..    1685    1717 ..    1677    1727 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.63
  PF00910.17   3 lyGpsgeGKStlakeLakall 23 
                 l G++g GK+t++  L+  l+
  MMETSP1325-20131115|5176_1 563 LLGHNGAGKTTTISMLTGLLT 583
                 78**********999876665 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 1.5
  PF00910.17   17 eLakall..kklklkkkdsvysrnpeddfwdgYtgqevv 53  
                  eL+++++  k l+++ ++++ s ++++++w  Y + ++ 
  MMETSP1325-20131115|5176_1  988 ELVRDIAqgKGLEFPPTKEMLSEGTTEQMWFIYASSTFA 1026
                  67778874445599999****************987765 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.028
  PF00910.17    3 lyGpsgeGKStlakeLakallk 24  
                  l Gp+g GKSt++  L+++ + 
  MMETSP1325-20131115|5176_1 1468 LLGPNGAGKSTTVSMLTRHTEP 1489
                  67*************9988773 PP

  == domain 4    score: 3.1 bits;  conditional E-value: 0.16
  PF00910.17   56 dDfgqvkdeenpsdlaelirlvsstpyplnmaslee 91  
                  d f q++ +   ++ + l+r +++++y+++m +++ 
  MMETSP1325-20131115|5176_1 1685 DSFVQSQFS---NEAKLLNRHANCFTYTVPMSKIDV 1717
                  556666544...799****************99985 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.016       9.7      16      51 ..     557     593 ..     551     608 .. 0.74
   2 ?    6.4   0.0    0.0089       5.3      16      61 ..    1461    1508 ..    1456    1556 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.016
   PF13604.1  16 sgdrvavvqGpAGtGKttvlkalrealeaa.g.krvvg 51 
                 +g+++a++ G+ G+GKtt+++ l+ +l+ + g  +v+g
  MMETSP1325-20131115|5176_1 557 DGEIFALL-GHNGAGKTTTISMLTGLLTPTsGdAKVYG 593
                 44555555.************99988876434456655 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0089
   PF13604.1   16 sgdrvavvqGpAGtGKttvlkalrealeaa.g.krvvglAptgkaakv 61  
                  ++  ++ + Gp G+GK+t+++ l++  e + g   v g++   + +++
  MMETSP1325-20131115|5176_1 1461 KKGECMGLLGPNGAGKSTTVSMLTRHTEPTrGeGLVKGYSVRDRFVDA 1508
                  455678888*************99998875454667777766666555 PP

>> PF05783.6  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1     0.022        13      41      74 ..     554     587 ..     532     595 .. 0.82
   2 ?    7.5   0.0    0.0018       1.1      47     105 ..    1465    1522 ..    1454    1527 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.022
   PF05783.6  41 klPsgksvlvlGedgsGkttliaklqGveenkkG 74 
                 k+  g    +lG++g+Gktt i+ l G+  +  G
  MMETSP1325-20131115|5176_1 554 KMHDGEIFALLGHNGAGKTTTISMLTGLLTPTSG 587
                 6677777889****************98777666 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0018
   PF05783.6   47 svlvlGedgsGkttliaklqGveenkkGrGleylyldvkdedrddltrlnvwildGdly 105 
                   + +lG +g+Gk+t ++ l    e+ +G Gl   y +v+d   d    ++v   d  ly
  MMETSP1325-20131115|5176_1 1465 CMGLLGPNGAGKSTTVSMLTRHTEPTRGEGLVKGY-SVRDRFVDAAKHMGVVTQDNTLY 1522
                  56689**************************9998.8**********999999988877 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.055        33      21      42 ..     557     577 ..     549     607 .. 0.84
   2 ?    7.1   0.0      0.01         6      19      55 ..    1460    1495 ..    1452    1545 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.055
   PF13191.1  21 egsplllvtGpsGiGKSsLlre 42 
                 +g+ ++ ++G+ G GK++ +  
  MMETSP1325-20131115|5176_1 557 DGE-IFALLGHNGAGKTTTISM 577
                 455.899***********9987 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.01
   PF13191.1   19 vsegsplllvtGpsGiGKSsLlrelakpillerlrfa 55  
                  v  g+ ++ ++Gp G GKS+ +  l ++    r++ +
  MMETSP1325-20131115|5176_1 1460 VKKGE-CMGLLGPNGAGKSTTVSMLTRHTEPTRGEGL 1495
                  67777.8889*************98877666555555 PP

>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.3   0.00083      0.49       3      24 ..     560     581 ..     558     592 .. 0.84
   2 ?    4.7   0.1     0.027        16       6      25 ..    1468    1487 ..    1464    1499 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00083
                 EEEEE-------TTTHHHHHHH CS
  PF00448.17   3 villvGlqGaGKTTtlaKLAal 24 
                 +++l+G +GaGKTTt++ L  l
  MMETSP1325-20131115|5176_1 560 IFALLGHNGAGKTTTISMLTGL 581
                 6789************988765 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.027
                  EE-------TTTHHHHHHHH CS
  PF00448.17    6 lvGlqGaGKTTtlaKLAall 25  
                  l+G++GaGK Tt++ L ++ 
  MMETSP1325-20131115|5176_1 1468 LLGPNGAGKSTTVSMLTRHT 1487
                  89***********9998765 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.012       7.1       3      63 ..     562     628 ..     561     654 .. 0.65
   2 ?    4.8   0.0     0.056        33       4      30 ..    1468    1491 ..    1466    1529 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.012
   PF08477.8   3 vvvGdkgvGKssllsqlvgeefp...kkklpeeikgdtlavk...tlevdvdtellelwdlggreel 63 
                 +++G  g+GK++ +s l+g   p   + k++  ++ d++a     t ++   + l+    +g+++e+
  MMETSP1325-20131115|5176_1 562 ALLGHNGAGKTTTISMLTGLLTPtsgDAKVYGHSIADGMATIrrmTGVCPQHDILFDYLTTGEHIEF 628
                 689***************9999844433333333333222212224444444444666666666665 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.056
   PF08477.8    4 vvGdkgvGKssllsqlvgeefpkkklp 30  
                  ++G  g+GKs+ +s l++ + p   ++
  MMETSP1325-20131115|5176_1 1468 LLGPNGAGKSTTVSMLTRHTEP---TR 1491
                  7899*************99999...33 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.2   7.3e+02      46      61 ..     557     572 ..     553     578 .. 0.86
   2 ?    1.9   0.1       0.2   1.2e+02      44      61 ..    1460    1477 ..    1456    1486 .. 0.89
   3 ?    7.3   0.0    0.0044       2.6     103     149 ..    1581    1626 ..    1572    1631 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 1.2
  PF01695.12  46 qaenlvllGpsGvGKt 61 
                 + e ++llG+ G+GKt
  MMETSP1325-20131115|5176_1 557 DGEIFALLGHNGAGKT 572
                 567789*********9 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.2
  PF01695.12   44 veqaenlvllGpsGvGKt 61  
                  v++ e++ llGp G+GK+
  MMETSP1325-20131115|5176_1 1460 VKKGECMGLLGPNGAGKS 1477
                  67899************8 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.0044
  PF01695.12  103 lkrlakvdllilDdlgllplseeeakllfellskryerrsiiltsnl 149 
                  l+ + +  ++ +D+   + l++ ++  l++++s+ +++rs+ilt+ l
  MMETSP1325-20131115|5176_1 1581 LALIGNPSVVLMDEPS-AGLDPVSRRNLWRIISETMKSRSVILTTHL 1626
                  5556667778888754.568888999******************976 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.012       7.2      64      88 ..     682     706 ..     663     707 .. 0.87
   2 ?   -2.0   0.0       5.4   3.2e+03      41      72 ..    1272    1301 ..    1269    1303 .. 0.80
   3 ?    2.2   0.0      0.25   1.5e+02      64      88 ..    1587    1611 ..    1561    1613 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.012
   PF13558.1  64 irlvfLDEAFsklDeeniasllell 88 
                  r+v+LDE++++lD+  +++l ++l
  MMETSP1325-20131115|5176_1 682 TRFVVLDEPTAGLDPGARRKLWATL 706
                 699************9999987765 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 5.4
   PF13558.1   41 lvylalaaAlaalyssaegrepsirlvfLDEA 72  
                  ++ ++l+  l + +s++  + + i+++ +DE 
  MMETSP1325-20131115|5176_1 1272 PIFVVLVIVLTQNLSRQ--SGEDIDTMGIDES 1301
                  67788888888888886..4799*******97 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.25
   PF13558.1   64 irlvfLDEAFsklDeeniasllell 88  
                  ++ v++DE+ ++lD+ ++++l +++
  MMETSP1325-20131115|5176_1 1587 PSVVLMDEPSAGLDPVSRRNLWRII 1611
                  7889************999998876 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.057        34       3      24 ..     557     578 ..     555     595 .. 0.87
   2 ?    6.2   0.1     0.016       9.3       5      28 ..    1464    1487 ..    1460    1648 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.057
   PF13401.1   3 sagilvvtGesGvGKTtllrrl 24 
                 +  i ++ G  G+GKTt++ +l
  MMETSP1325-20131115|5176_1 557 DGEIFALLGHNGAGKTTTISML 578
                 567999***********99776 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.016
   PF13401.1    5 gilvvtGesGvGKTtllrrlarql 28  
                   ++ + G+ G+GK+t++ +l r  
  MMETSP1325-20131115|5176_1 1464 ECMGLLGPNGAGKSTTVSMLTRHT 1487
                  677789***********9999964 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.29   1.7e+02      42      67 ..     553     580 ..     544     586 .. 0.77
   2 ?    8.5   0.0    0.0011      0.65      38      70 ..    1456    1488 ..    1447    1528 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.29
  PF03215.10  42 sakkr..illltGPsGcgKsTtvkvlsk 67 
                  + +   i+ l G  G+gK+Tt+ +l+ 
  MMETSP1325-20131115|5176_1 553 VKMHDgeIFALLGHNGAGKTTTISMLTG 580
                 45454559999************99975 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0011
  PF03215.10   38 dflesakkrillltGPsGcgKsTtvkvlskelg 70  
                  + l  +k   + l GP G+gKsTtv +l++   
  MMETSP1325-20131115|5176_1 1456 TNLRVKKGECMGLLGPNGAGKSTTVSMLTRHTE 1488
                  5556666679999***************98765 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       6.6   3.9e+03      99     121 ..     500     522 ..     498     540 .. 0.82
   2 ?    4.5   0.0     0.043        26       3      20 ..     562     579 ..     560     637 .. 0.88
   3 ?    4.9   0.0     0.032        19       5      23 ..    1469    1487 ..    1467    1517 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 6.6
   PF13671.1  99 vrivylevpeetlreRlakRern 121
                 +++v ++ +eet  +Rl+++e +
  MMETSP1325-20131115|5176_1 500 CSCVCCTESEETKMARLRRKEGQ 522
                 579***************99986 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.043
   PF13671.1   3 llvGlpGsGKstlaerll 20 
                  l G+ G+GK+t + +l 
  MMETSP1325-20131115|5176_1 562 ALLGHNGAGKTTTISMLT 579
                 689*********999875 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.032
   PF13671.1    5 vGlpGsGKstlaerllkkl 23  
                   G+ G+GKst + +l +++
  MMETSP1325-20131115|5176_1 1469 LGPNGAGKSTTVSMLTRHT 1487
                  7**********99987654 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.072        43       2      21 ..     561     580 ..     560     728 .. 0.83
   2 ?    4.7   0.0     0.043        26       2      22 ..    1466    1486 ..    1465    1523 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.072
                 EEEE--TT---HHHHHHHHC CS
  PF01926.18   2 vaivGrpNvGKStLinaLtg 21 
                 +a++G+  +GK+t i  Ltg
  MMETSP1325-20131115|5176_1 561 FALLGHNGAGKTTTISMLTG 580
                 589***************96 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.043
                  EEEE--TT---HHHHHHHHCS CS
  PF01926.18    2 vaivGrpNvGKStLinaLtge 22  
                  ++++G   +GKSt +  Lt++
  MMETSP1325-20131115|5176_1 1466 MGLLGPNGAGKSTTVSMLTRH 1486
                  689***************953 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.077        46       2      22 ..     561     581 ..     560     623 .. 0.83
   2 ?    5.5   0.0     0.023        14       4      24 ..    1468    1488 ..    1466    1524 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.077
   PF13521.1   2 ivitGgpstGKTtlleaLaar 22 
                 ++++G  ++GKTt+++ L+ +
  MMETSP1325-20131115|5176_1 561 FALLGHNGAGKTTTISMLTGL 581
                 6899***********999855 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.023
   PF13521.1    4 itGgpstGKTtlleaLaargy 24  
                  ++G+ ++GK+t+++ L+++  
  MMETSP1325-20131115|5176_1 1468 LLGPNGAGKSTTVSMLTRHTE 1488
                  78***************9833 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.046        27      21      40 ..     563     582 ..     559     592 .. 0.81
   2 ?    3.1   0.0     0.066        39      22      41 ..    1469    1488 ..    1455    1522 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.046
   PF06414.7  21 lgGqpGAGKtslaellleel 40 
                 l G  GAGKt+++++l + l
  MMETSP1325-20131115|5176_1 563 LLGHNGAGKTTTISMLTGLL 582
                 66999*********998766 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.066
   PF06414.7   22 gGqpGAGKtslaellleela 41  
                   G+ GAGK+++ ++l + ++
  MMETSP1325-20131115|5176_1 1469 LGPNGAGKSTTVSMLTRHTE 1488
                  599**********9998876 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.2     0.073        43      26      44 ..     561     579 ..     542     588 .. 0.82
   2 ?    5.1   0.1     0.026        16      26      45 ..    1466    1485 ..    1457    1488 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.073
  PF01935.12  26 lAilgsTGsGKSntvavLl 44 
                 +A lg  G+GK++t++ L 
  MMETSP1325-20131115|5176_1 561 FALLGHNGAGKTTTISMLT 579
                 9*************99885 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.026
  PF01935.12   26 lAilgsTGsGKSntvavLle 45  
                  ++ lg  G+GKS+tv+ L +
  MMETSP1325-20131115|5176_1 1466 MGLLGPNGAGKSTTVSMLTR 1485
                  6899999*********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1978 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       779  (0.0569778); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 3.08u 0.38s 00:00:03.46 Elapsed: 00:00:01.33
# Mc/sec: 3563.91
//
Query:       MMETSP1325-20131115|5179_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       87  (0.00636337); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.34s 00:00:00.62 Elapsed: 00:00:00.46
# Mc/sec: 197.96
//
Query:       MMETSP1325-20131115|5169_1  [L=534]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.041   13.4   0.1        6.6    6.2   0.0    3.2  3  PF02146.12 Sir2 family


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.013   1.8e+02       1      15 [.      63      77 ..      63      85 .. 0.92
   2 ?    6.2   0.0   0.00048       6.6      81     115 ..     202     238 ..     194     266 .. 0.76
   3 ?    1.2   0.0     0.017   2.3e+02     132     151 ..     367     386 ..     344     398 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.013
                -----TT-------. CS
  PF02146.12  1 GAGiStesGipdfRs 15
                GAG S++sG+  +R+
  MMETSP1325-20131115|5169_1 63 GAGFSADSGLAIYRD 77
                9*************7 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.00048
                 EEEE--SS-HHHH-.---SEEE----TTEEEETT.TS CS
  PF02146.12  81 rliTQNidnLekka.GskkvvelHGslakakcvk.Ce 115
                  l+T N+d    +    +++ e+HG++  ++c + C 
  MMETSP1325-20131115|5169_1 202 YLFTSNVDAHSFDHfEASEIRECHGNIECFQCDQpCI 238
                 6789999986544304459*******99888866454 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.017
                 -.B-ST---BEEESS--B-- CS
  PF02146.12 132 veecekcgkllkpdvvfFGe 151
                 ++ c++cg+  +p + +F +
  MMETSP1325-20131115|5169_1 367 IPMCPSCGEPARPSILMFED 386
                 569*************9966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       701  (0.0512727); expected 273.4 (0.02)
Passed bias filter:                      494  (0.0361322); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.94u 0.41s 00:00:01.35 Elapsed: 00:00:00.59
# Mc/sec: 2168.91
//
Query:       MMETSP1325-20131115|5182_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.50
# Mc/sec: 249.22
//
Query:       MMETSP1325-20131115|5181_1  [L=321]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     6e-111  368.8   8.6   8.2e-111  368.4   5.9    1.2  1  PF01680.12 SOR/SNZ family
      1e-07   31.1   5.6    3.2e-06   26.2   0.2    2.7  3  PF05690.9  Thiazole biosynthesis protein ThiG
    0.00013   20.8   0.9      0.033   12.9   0.0    2.4  2  PF01207.12 Dihydrouridine synthase (Dus)
     0.0029   16.8   0.3      0.054   12.6   0.0    2.3  2  PF00977.16 Histidine biosynthesis protein
     0.0073   15.3   0.1     0.0073   15.3   0.1    2.4  2  PF03060.10 Nitronate monooxygenase
  ------ inclusion threshold ------
      0.012   14.5   0.2       0.17   10.8   0.0    2.3  2  PF00218.16 Indole-3-glycerol phosphate synthase
      0.047   12.5   1.2       0.17   10.7   0.0    2.4  2  PF04131.9  Putative N-acetylmannosamine-6-phosphate epimerase
      0.059   11.7   0.0        0.1   10.9   0.0    1.4  1  PF00290.15 Tryptophan synthase alpha chain


Domain annotation for each model (and alignments):
>> PF01680.12  SOR/SNZ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  368.4   5.9  4.8e-114  8.2e-111       2     209 .]       7     214 ..       6     214 .. 0.99

  Alignments for each domain:
  == domain 1    score: 368.4 bits;  conditional E-value: 4.8e-114
                 --HHHH---GGGG----EEEESSHHHHHHHHH----EEEE-SS-HHHHHC------S--HHHHHHHHCC-SS-EEEEEE---HHHHHHHHHTT-SEEEEETTS--S-SS----GGG-SS-EEE-------HHHHHH----EEE---------THHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHHTS-HHHHHHHHH----SSEEE-- CS
  PF01680.12   2 gtekvkkglakmlkgGvimdvvnaeqariaeeaGavavmalervpadiraaGgvarmsdpklikeimdavsipvmakvriGhfveaqilealgvdyidesevltpadeefhidkkkfkvpfvcGarnlGealrriaeGaamirtkGeaGtGdvveavrhlrlvneeirkvqklsedelykvakelaapvelvkevkkegklpvvnfaa 209
                 gt+ vkkgla+ lkgGvimdv+n+eqariae+aGavavmaler+padir++Ggvarmsdp++i ei+ av+ipvmak+riGhfveaq+l+a+++dyidesevlt adee+hi+k++f+vpfvcG+rnlGealrriaeGaam+rtkGeaGtG++veavrh r+v++ei++vq+++edel++vak+++ap+elvk v+++gklpvvnfaa
  MMETSP1325-20131115|5181_1   7 GTAPVKKGLAQCLKGGVIMDVMNVEQARIAEQAGAVAVMALERIPADIRTDGGVARMSDPDMILEIKRAVTIPVMAKARIGHFVEAQVLQAIEIDYIDESEVLTMADEENHINKNNFEVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNIVEAVRHARAVHREIKRVQSMDEDELFVVAKNMQAPLELVKYVHDNGKLPVVNFAA 214
                 6788**********************************************************************************************************************************************************************************************************96 PP

>> PF05690.9  Thiazole biosynthesis protein ThiG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.6    0.0021       3.6     137     196 ..      33     100 ..      19     112 .. 0.76
   2 ?   -1.9   0.0      0.74   1.3e+03      63      81 ..     122     140 ..      95     151 .. 0.74
   3 !   26.2   0.2   1.9e-09   3.2e-06     165     224 ..     196     257 ..     188     271 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0021
                 HHHHHC----EEEEB...-----------...-HHHHHHHHHH-SS-BEEE-----HHHH..HHHHH- CS
   PF05690.9 137 akrleevGcaavmPl...aapiGsgkGlk...nkenlkiiieeakvPvivDAGigtpsda..aqamel 196
                 a+  e++G+ avm l    a i +  G++   ++ ++  i +++++Pv+  A ig+  +a   qa+e+
  MMETSP1325-20131115|5181_1  33 ARIAEQAGAVAVMALeriPADIRTDGGVArmsDPDMILEIKRAVTIPVMAKARIGHFVEAqvLQAIEI 100
                 6677899******9733368999999976111567788888899***********8665511566665 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.74
                 SEEEEE-----SHHHHHHH CS
   PF05690.9  63 ltlLPntaGaktaeeAvri 81 
                    +P   G+++  eA+r 
  MMETSP1325-20131115|5181_1 122 NFEVPFVCGCRNLGEALRR 140
                 3346888999999999874 PP

  == domain 3    score: 26.2 bits;  conditional E-value: 1.9e-09
                 HHHHHHHHH-SS-BEEE-..----HHHHHHHHH----EEE-SCCCHTSSSHHHHHHHHHHHH CS
   PF05690.9 165 enlkiiieeakvPvivDA..GigtpsdaaqamelGadavllntavaeakdpvamArafklav 224
                 e +k + ++ k+Pv+  A  G+ tp daa  m+lG+d+v++ + + ++ +p + A+a  +a+
  MMETSP1325-20131115|5181_1 196 ELVKYVHDNGKLPVVNFAagGVATPADAALMMQLGMDGVFIGSGIFKSGNPLERAKACVQAT 257
                 4578888999****9654459************************************98886 PP

>> PF01207.12  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.1    0.0019       3.2      97     195 ..      56      89 ..      27     100 .. 0.51
   2 !   12.9   0.0   1.9e-05     0.033     169     232 ..     192     256 ..     153     283 .. 0.78

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0019
  PF01207.12  97 ggaGaaLlrkpdlvaqivkavvkaveipvtvkirigiddskenalelarrveaaGaqaltvHgRtraqnyegtadweaIkevkqavsipviaNGdikda 195
                  ++G a + +p                                                                 + I e+k+av+ipv+a   i ++
  MMETSP1325-20131115|5181_1  56 TDGGVARMSDP-----------------------------------------------------------------DMILEIKRAVTIPVMAKARIGHF 89 
                 33344444444.................................................................44555555555555554444444 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 1.9e-05
  PF01207.12 169 tadweaIkevkqavsipv..iaNGdikdaedaqailaetGadgvMigrgalgnPwlfaestavktg 232
                 +a +e +k+v ++ ++pv  +a G++ ++ da  +++  G+dgv ig g  +  + +++ +a+ + 
  MMETSP1325-20131115|5181_1 192 QAPLELVKYVHDNGKLPVvnFAAGGVATPADAALMMQL-GMDGVFIGSGIFKSGNPLERAKACVQA 256
                 5667889999999886662379***********99999.**********87544444433333333 PP

>> PF00977.16  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.061     1e+02      70     192 ..      48      79 ..      17     102 .. 0.63
   2 !   12.6   0.0   3.2e-05     0.054     179     224 ..     195     242 ..     190     245 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.061
                 TT-SSEEEEE----SHHHHHHHHH----EEEESHHHHH-THHHHHHHHH--TTTEEEEEEEEEEEEEE---TEEEGEEHHHHHHHHHH----EEEEEETTC--------HHHHHHHHHHHSSE CS
  PF00977.16  70 eevfiplqvGgGIrsledveelleagadkviigtaavknpelikelaekfgsqkivvaiDakkgkvaikgwreetgldavelakkleelgageilltdidrdGtlsGpdlellkklaeavkip 192
                 e++ +++  +gG+ +++d + +le                                                                                           +++av+ip
  MMETSP1325-20131115|5181_1  48 ERIPADIRTDGGVARMSDPDMILE-------------------------------------------------------------------------------------------IKRAVTIP 79 
                 444445555555555555555555...........................................................................................44444444 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 3.2e-05
                 HHHHHHHHHHHSSEEE..EE----SHHHHHHHHC----EEEESHCCCT CS
  PF00977.16 179 lellkklaeavkipvi..asGGvgsledlkelksegvdavlvgsalhe 224
                 lel+k + ++ k+pv+  a+GGv++++d + + + g+d+v +gs +++
  MMETSP1325-20131115|5181_1 195 LELVKYVHDNGKLPVVnfAAGGVATPADAALMMQLGMDGVFIGSGIFK 242
                 6899999999999995559************************98876 PP

>> PF03060.10  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.8      0.23   3.9e+02     139     162 ..      23      46 ..      19      84 .. 0.58
   2 !   15.3   0.1   4.3e-06    0.0073     179     220 ..     195     238 ..     185     253 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.23
  PF03060.10 139 viplvssakearkaaaagaDalva 162
                 vi+ v ++++ar a++aga a+ a
  MMETSP1325-20131115|5181_1  23 VIMDVMNVEQARIAEQAGAVAVMA 46 
                 677788888888888888665554 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 4.3e-06
  PF03060.10 179 lllvetvkdavdiPvi..AAGGiadgrgiaaaLalGaeGVqiGT 220
                 l lv+ v d+ ++Pv+  AAGG+a+  + a +++lG  GV iG+
  MMETSP1325-20131115|5181_1 195 LELVKYVHDNGKLPVVnfAAGGVATPADAALMMQLGMDGVFIGS 238
                 568888999999***888*************************8 PP

>> PF00218.16  Indole-3-glycerol phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1     0.086   1.5e+02      61      86 ..      20      45 ..       8     101 .. 0.74
   2 ?   10.8   0.0   9.7e-05      0.17     197     247 ..     192     246 ..     180     252 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.086
                ----BSS--HHHHHHHHTTT.-SEEE CS
  PF00218.16 61 kgliredfdpaeiakayeeagAsaiS 86
                kg + +d+  +e+a+  e+agA a+ 
  MMETSP1325-20131115|5181_1 20 KGGVIMDVMNVEQARIAEQAGAVAVM 45
                56667777788888888888887764 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 9.7e-05
                 HHHHHHCCTS....-T.SEEEEE----SHHHHHHHCCT.--EEEE--CCCC-TTH CS
  PF00218.16 197 etteeLaelvp...kd.vllvaeSGiktredveklkkaganalLvGesLmraedv 247
                 +   eL+++v+   k  v+ +a  G+ t++d+  + + g++++ +G+ + ++ ++
  MMETSP1325-20131115|5181_1 192 QAPLELVKYVHdngKLpVVNFAAGGVATPADAALMMQLGMDGVFIGSGIFKSGNP 246
                 5556677777765433488899*************************99998775 PP

>> PF04131.9  Putative N-acetylmannosamine-6-phosphate epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2      0.28   4.8e+02     126     126 ..      58      58 ..      20     114 .. 0.55
   2 ?   10.7   0.0   9.9e-05      0.17     134     178 ..     195     242 ..     186     259 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.28
   PF04131.9 126 e 126
                  
  MMETSP1325-20131115|5181_1  58 G 58 
                 1 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 9.9e-05
   PF04131.9 134 falvkalseag.lk..viaeGrintPekakkaieiGvdavvvGsaitr 178
                 ++lvk + ++g l     a G + tP+ a+ ++++G+d v +Gs i +
  MMETSP1325-20131115|5181_1 195 LELVKYVHDNGkLPvvNFAAGGVATPADAALMMQLGMDGVFIGSGIFK 242
                 66777777665233224699************************9965 PP

>> PF00290.15  Tryptophan synthase alpha chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     6e-05       0.1     187     249 ..     196     259 ..     186     269 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 6e-05
                 HHHHHHHHH-SS-EE..------SHHHHHHHHH------EE--CCCCC--.--SSS----HHHHH CS
  PF00290.15 187 elvervkkltavpva..vGFGistpeqvkkvaekvadGvivGSalvdkieeeleekekkleklee 249
                 elv+ v++  ++pv+     G+ tp++++ +++ + dGv +GS + +  +  le+++++++  ++
  MMETSP1325-20131115|5181_1 196 ELVKYVHDNGKLPVVnfAAGGVATPADAALMMQLGMDGVFIGSGIFKSGN-PLERAKACVQATTH 259
                 56777777777776422234************************998765.56666666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.67u 0.38s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 1508.30
//
Query:       MMETSP1325-20131115|5183_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.043   13.7   0.1      0.049   13.5   0.1    1.0  1  PF05222.10 Alanine dehydrogenase/PNT, N-terminal domain


Domain annotation for each model (and alignments):
>> PF05222.10  Alanine dehydrogenase/PNT, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.6e-06     0.049      12      35 ..      12      35 ..       8      36 .. 0.95

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.6e-06
                --SS-HHHHHHHHH---EEEEETT CS
  PF05222.10 12 RvaltPatvkkLvkaGhevlVEsg 35
                Rv++ P+ v++Lv++  evl+E++
  MMETSP1325-20131115|5183_1 12 RVSVRPEIVSRLVAQESEVLIEAD 35
                9*********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 193.75
//
Query:       MMETSP1325-20131115|5185_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-20   72.6   0.1    3.1e-20   71.6   0.1    1.6  1  PF02824.16 TGS domain


Domain annotation for each model (and alignments):
>> PF02824.16  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   0.1   2.2e-24   3.1e-20       1      60 []     128     202 ..     128     202 .. 0.95

  Alignments for each domain:
  == domain 1    score: 71.6 bits;  conditional E-value: 2.2e-24
                 EEEES.---EEEE.......EETTT-HHHHHHHH-S--GGG--EEEETS.......SEE-SSS---TTEEEEEES CS
  PF02824.16   1 irvyt.pdGkvpd.......lprgstveDfAykIhrslakkfiyAlVnG.......qrvglshvLedgDvVeIvt 60 
                 +r+yt p+G++pd            tveDf++++hr+l k+f yA V+G       qrvg  h L d+DvV++v+
  MMETSP1325-20131115|5185_1 128 MRIYTkPKGQIPDydepvvlHAVKPTVEDFCNRLHRGLIKQFHYAWVWGssvkhqpQRVGKQHILHDEDVVQLVK 202
                 79****************96566778***********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       438  (0.0320363); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 1033.43
//
Query:       MMETSP1325-20131115|5186_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.3    9.7   1.0       0.36    9.5   0.7    1.1  1  PF01698.11 Floricaula / Leafy protein


Domain annotation for each model (and alignments):
>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.7   2.6e-05      0.36     146     223 ..      59     130 ..      35     140 .. 0.39

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 2.6e-05
  PF01698.11 146 qeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkse.ededeeeeededeegsged 223
                 +++ s++   ++ ++++sgg g +  ++v  e     +++++ +++k  r++  e++s+ edede e+ed de+ +g+ 
  MMETSP1325-20131115|5186_1  59 SDVQSDDGAVSSVKSQASGGLG-SVPGSVSFE-----ASSSSSTNRKPPRRRVIESSSSsEDEDEGEDEDGDED-EGAA 130
                 1222223222233333333333.223333333.....2222222223333333333333144444444444444.3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 748.25
//
Query:       MMETSP1325-20131115|5187_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0047   16.7   0.6        0.5   10.4   0.0    2.0  2  PF13516.1 Leucine Rich repeat
  ------ inclusion threshold ------
       0.22   11.7   1.0        2.7    8.4   0.4    2.1  2  PF13504.1 Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   7.3e-05       0.5       4      20 ..       2      19 ..       1      23 [. 0.88
   2 !    5.3   0.1    0.0032        22       1       9 [.      25      33 ..      25      34 .] 0.90

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 7.3e-05
   PF13516.1  4 LtsLdLsnNq.igdeGls 20
                LtsL L +++ ++d+ +s
  MMETSP1325-20131115|5187_1  2 LTSLKLRSCPdLTDDSIS 19
                9********88***9876 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.0032
   PF13516.1  1 lknLtsLdL 9 
                ++ LtsL+L
  MMETSP1325-20131115|5187_1 25 CTALTSLNL 33
                899*****9 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.4   0.00039       2.7       3      15 ..       2      15 ..       1      32 [. 0.85
   2 ?    1.9   0.0     0.057   3.9e+02       2       8 ..      27      33 ..      26      34 .] 0.78

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00039
   PF13504.1  3 LkeLdLsgnr.Lts 15
                L+ L L++++ Lt+
  MMETSP1325-20131115|5187_1  2 LTSLKLRSCPdLTD 15
                99****99988884 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.057
   PF13504.1  2 nLkeLdL 8 
                 L+ L+L
  MMETSP1325-20131115|5187_1 27 ALTSLNL 33
                7999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        82  (0.00599766); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.26u 0.37s 00:00:00.63 Elapsed: 00:00:00.51
# Mc/sec: 159.76
//
Query:       MMETSP1325-20131115|5189_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-08   31.7   4.2    7.8e-08   31.5   2.9    1.1  1  PF02535.17 ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   2.9   5.7e-12   7.8e-08     202     316 ..       4     111 ..       1     114 [. 0.89

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 5.7e-12
  PF02535.17 202 gislflAvllHelphelglgaiLlkagasrkkavllnllfaltaplGaliGiavsaadnsgrsdlvsgillalaaGtflYvalvellpeelanekslkqnllqllglllGfalml 316
                 g+++++++++H++p++l++ ++L  +g+s++  +l++++++l  p+ a+ +++              +i l++aaG +  va+ el+pe l++ +   +  + +    +G+++m+
  MMETSP1325-20131115|5189_1   4 GLFISMSLAIHNVPEGLAVALVLQPSGLSNIDTALWSIFTSLPQPVFAVPAFMS-----VNKFTPFLPIGLGFAAGAMGNVAIRELIPEALEELSL--ELAVTTTTAAFGIMTMC 111
                 8999******************************************99999999.....77888899************************99885..66666666677777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|5190_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.60
# Mc/sec: 275.58
//
Query:       MMETSP1325-20131115|5192_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|5191_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.5e-108  361.8   5.8     5e-108  361.7   4.0    1.0  1  PF02233.11 NAD(P) transhydrogenase beta subunit
     0.0013   18.3   2.7       0.02   14.5   1.1    2.6  2  PF00205.17 Thiamine pyrophosphate enzyme, central domain


Domain annotation for each model (and alignments):
>> PF02233.11  NAD(P) transhydrogenase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  361.7   4.0  7.3e-112    5e-108     233     443 ..       1     211 [.       1     212 [] 0.99

  Alignments for each domain:
  == domain 1    score: 361.7 bits;  conditional E-value: 7.3e-112
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX------HHHHHHHHHT-SEEEEE-----TTTT-HHHHHHHHHHHHH---EEEEEE-TT-------HHHHHHHTT--GGGEEEHHHHGGGGGG-SEEEE----GGG-GGGTSSTTSTT-------GGG---EEEE-SSS---------GGGGS CS
  PF02233.11 233 GflLnnsllivaGalvgssGaiLsyimckamnrsllsvilGgfgeegskaaakekaeekevkeisaeevaellleassviivPGYGlavaqaqhavaelakeLeergvevrfaihPvaGrlPGhlnvLLaeanvpYdivleleeinedlaetDvvlviGanDtvnpaakedpnspiaGmPvlevekakqvivlkrslasGyagvdnplffk 443
                 Gf+L+n ll+v+Gal+gssGaiL++imc amnr + svilGg+g++++ ++++ +  e+ ++ei  ++ +e l+ea+sviivPGYGlava+aq+a+a+++++L+++g +vrf+ihPvaGr+PG+lnvLLaea+vpYd+v+e+eein+d+++tDvvlviGanDtvn+aa +dpns iaGmPvlev++ak+vi++krs+a+Gyagv+np+ffk
  MMETSP1325-20131115|5191_1   1 GFMLDNPLLTVVGALIGSSGAILTHIMCEAMNREISSVILGGMGTKSKGGETDMSIYEGVHTEIIVDQCVEALQEAKSVIIVPGYGLAVAKAQYAIADIVAKLTKKGAKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVEEMEEINDDFEDTDVVLVIGANDTVNSAAIDDPNSIIAGMPVLEVWNAKNVIIMKRSMAQGYAGVENPVFFK 211
                 9*********************************************88888888889*********************************************************************************************************************************************************8 PP

>> PF00205.17  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       1.2   8.4e+03      14      27 ..      37      50 ..      28      53 .. 0.71
   2 !   14.5   1.1   2.9e-06      0.02       1      87 [.      66     161 ..      66     177 .. 0.70

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 1.2
                EEEEE-CHHCHTTG CS
  PF00205.17 14 PvilvGggvrrsea 27
                 vil G g++++++
  MMETSP1325-20131115|5191_1 37 SVILGGMGTKSKGG 50
                58888888887766 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 2.9e-06
                 HHHHHHHHHH-SSEEEEE-CHHCHTTGHHHHHHHHHHH...T-EE.EECGGGCTSS-TTSTTB--B-SSCS.....CHHHHHHHHH-SEEEEES-- CS
  PF00205.17   1 ideaaellkaakrPvilvGggvrrseakeelralaekl...gipv.vttlmgkgvipedhplslgylgllg.....spaaneaieeaDlvlvlGar 87 
                 +d+ +e+l++ak ++i+ G+g + ++a+ ++++ + kl   g+ v +      g +p +    l+ +g++       +++n+ +e+ D+vlv+Ga+
  MMETSP1325-20131115|5191_1  66 VDQCVEALQEAKSVIIVPGYGLAVAKAQYAIADIVAKLtkkGAKVrFGIHPVAGRMPGQLNVLLAEAGVPYdvveeMEEINDDFEDTDVVLVIGAN 161
                 6899*************************999999999444444432222334444444443344444443666679999999999********65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       573  (0.0419105); expected 273.4 (0.02)
Passed bias filter:                      467  (0.0341574); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 1080.91
//
Query:       MMETSP1325-20131115|5193_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 306.20
//
Query:       MMETSP1325-20131115|5194_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   13.9   0.1        5.9    6.2   0.0    2.4  2  PF11344.3 Protein of unknown function (DUF3146)


Domain annotation for each model (and alignments):
>> PF11344.3  Protein of unknown function (DUF3146)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0   0.00043       5.9      38      54 ..       2      18 ..       1      24 [. 0.86
   2 ?    6.0   0.0   0.00052       7.2      37      51 ..      26      40 ..      20      59 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.00043
   PF11344.3 38 kgeLlvePslGraLikd 54
                + eL+v P lGr +++ 
  MMETSP1325-20131115|5194_1  2 QHELTVAPQLGRGVLQR 18
                679*********99875 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.00052
   PF11344.3 37 kkgeLlvePslGraL 51
                ++ eL+v P lGr +
  MMETSP1325-20131115|5194_1 26 RQHELTVAPQLGRGV 40
                6789*********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        66  (0.00482738); expected 273.4 (0.02)
Passed bias filter:                       60  (0.00438853); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.46
# Mc/sec: 322.99
//
Query:       MMETSP1325-20131115|5195_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.9e-06   25.7   0.7    1.1e-05   25.4   0.5    1.2  1  PF09440.5 eIF3 subunit 6 N terminal domain


Domain annotation for each model (and alignments):
>> PF09440.5  eIF3 subunit 6 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.5   8.1e-10   1.1e-05       1      22 [.      16      37 .]      16      37 .] 0.97

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 8.1e-10
   PF09440.5  1 dltqkllpyLDrHLifPLLefl 22
                dlt+++  yLD HL+fPLLef+
  MMETSP1325-20131115|5195_1 16 DLTNTISAYLDLHLMFPLLEFV 37
                9********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 177.33
//
Query:       MMETSP1325-20131115|5197_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.25s 00:00:00.55 Elapsed: 00:00:00.50
# Mc/sec: 301.94
//
Query:       MMETSP1325-20131115|5196_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-24   85.9   0.9    3.4e-24   85.8   0.6    1.0  1  PF00112.18 Papain family cysteine protease
     0.0068   14.8   0.2     0.0079   14.6   0.1    1.1  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   0.6     5e-28   3.4e-24      99     219 ..       3     111 ..       1     112 [. 0.90

  Alignments for each domain:
  == domain 1    score: 85.8 bits;  conditional E-value: 5e-28
                 S--CCCC--C.CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEEE CS
  PF00112.18  99 kCkkkkkkekevakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseavyp 219
                 +Ck++  +++    i+gy++++   e+a+++ + ++gP+sv++da++  f++Y+sGv++   c + +++h v++vG +++    yW v+NSWgt+wGe+G+ir+a g+n +c+i+++++y+
  MMETSP1325-20131115|5196_1   3 SCKSSLPSTS--CAITGYKTISG--ESAMASYVESTGPLSVCLDANN--FNSYTSGVMSV--CGN-SVDHCVQAVGVDTS--AGYWKVRNSWGTSWGESGFIRLAYGSN-TCDITNDPTYV 111
                 6777755444..78999999998..699******************9..9*********8..996.9********98887..88***********************98.******99986 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   1.2e-06    0.0079     358     395 ..      60      93 ..      40      98 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.2e-06
  PF03051.10 358 lmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyf 395
                  ++H +  +gvd     ++  wkv nsWG   Ge G+ 
  MMETSP1325-20131115|5196_1  60 SVDHCVQAVGVDT----SAGYWKVRNSWGTSWGESGFI 93 
                 5678777788877....6778***************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 525.36
//
Query:       MMETSP1325-20131115|5198_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.79
# Mc/sec: 321.54
//
Query:       MMETSP1325-20131115|5200_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|5201_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.061   12.4  30.5      0.068   12.3  21.1    1.0  1  PF05285.7  SDA1
       0.65    8.8  30.2       0.79    8.5  20.9    1.1  1  PF07767.6  Nop53 (60S ribosomal biogenesis)
        1.3    6.7  34.2        1.4    6.5  23.7    1.0  1  PF04147.7  Nop14-like family
        2.7    6.2  42.8        3.1    6.0  29.7    1.0  1  PF10243.4  Microtubule-binding protein MIP-T3
        4.7    6.0  32.2        7.3    5.4  22.3    1.3  1  PF09073.5  BUD22
        5.4    5.2  30.2        6.1    5.0  20.9    1.0  1  PF03344.10 Daxx Family
          6    6.6  37.4        6.8    6.4  25.9    1.0  1  PF07133.6  Merozoite surface protein (SPAM)
        6.7    6.0  34.9        8.1    5.8  24.2    1.1  1  PF05764.8  YL1 nuclear protein


Domain annotation for each model (and alignments):
>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  21.1     4e-05     0.068     107     191 ..      19     111 ..       5     112 .] 0.42

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4e-05
   PF05285.7 107 eededeDeegewvdvesdeeeessDsedeeeeseeeeeeeesekkkkeesdeekseeeeeeaaeeeeee.........akeekiselassriLT 191
                 eede+e+++ge+ + e+deeee++ +ede++  e eee ++ +kk k+++++ek+++++e + ++e++e          k++  ++ + + i+T
  MMETSP1325-20131115|5201_1  19 EEDENEENDGEEGESEDDEEEEIESEEDEDD-AEFEEEPSRPKKKPKKDTEKEKEKKTKEPKPKKEKKErvekgkvkePKKSDKAKESGDGIMT 111
                 2333333333333334433333333333322.22233333333333343444444444444433333333444444335555555566666666 PP

>> PF07767.6  Nop53 (60S ribosomal biogenesis)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  20.9   0.00046      0.79     220     308 ..      10      92 ..       5     107 .. 0.36

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00046
   PF07767.6 220 ekilekvaeeasrlkemeeglaeeeddeeeeesedesekegfdsekelsinkpvknkrKtkaqRnkekrrkelekeakeekelkkkeeq 308
                 +++++ v+   ++ +e+ee   ee ++e++ee+e ese++++d e e   ++p ++k+K k+   kek++k +e + k+ek+++ ++ +
  MMETSP1325-20131115|5201_1  10 KRARPVVE---AEEDENEENDGEEGESEDDEEEEIESEEDEDDAEFE---EEPSRPKKKPKKDTEKEKEKKTKEPKPKKEKKERVEKGK 92 
                 34455555...233344433333333333333333333223333333...333333333333333333333333333333333322222 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  23.7   0.00083       1.4     346     413 ..      18      87 ..       5     105 .. 0.39

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00083
   PF04147.7 346 ededeeeddddeeeeeedvdedeeeedeedeesddeeeeeeeee..aseeeaeakkkkkktkkkkksaee 413
                 ++ede+e+ d ee e+ed +e+e e++e+++++++eee +  ++  ++++e+e++kk+k++k kk+++e+
  MMETSP1325-20131115|5201_1  18 AEEDENEENDGEEGESEDDEEEEIESEEDEDDAEFEEEPSRPKKkpKKDTEKEKEKKTKEPKPKKEKKER 87 
                 2222222222333223333333333344444444444444333322222222222222222222222222 PP

>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  29.7    0.0018       3.1      93     190 ..       8     104 ..       2     108 .. 0.66

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0018
   PF10243.4  93 aktsrak.eekneskkeeekrkekkkeekkkkeekekeeekerkqkeelkekrkpkekeke.keKkkeeekdrekekererkkaserekkekkkdsknkk 190
                 +k+ + +  e++e ++ee+ ++e+++e+++++e++ +e   ++ + e  +e+++pk+k k+ +eK+ke++ +++k+k++++++ ++ ++ke+kk +k k+
  MMETSP1325-20131115|5201_1   8 SKKRARPvVEAEEDENEENDGEEGESEDDEEEEIESEE---DEDDAEFEEEPSRPKKKPKKdTEKEKEKKTKEPKPKKEKKERVEKGKVKEPKKSDKAKE 104
                 43333330344444555555555555555555555555...444557778888888888888999999999*****999999999999999976444443 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  22.3    0.0043       7.3     193     286 ..      19      99 ..       6     109 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0043
   PF09073.5 193 dsdeeeesdsedlsqydallvsssdeesgeeqdesddeeesesesesdeedeedsdsrsvsdseeseppskkaKkkkaktsstfLPsLmgGyfs 286
                 ++de+        ++ d++ ++s+d+e++     + + ee+e++ e +ee+++++++++++ ++e+e+++k++K kk+k++++++ + +  + s
  MMETSP1325-20131115|5201_1  19 EEDEN--------EENDGEEGESEDDEEE-----EIESEEDEDDAEFEEEPSRPKKKPKKDTEKEKEKKTKEPKPKKEKKERVEKGKVKEPKKS 99 
                 22222........3345555556665554.....467888888888899999999999999999999999999999986666655444444444 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  20.9    0.0035       6.1     430     531 ..      12      96 ..       2     110 .. 0.29

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0035
  PF03344.10 430 esPllasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedee.........kndevakgirvseeqqkressvqpesp 531
                 + P ++++e e+ee+  +e             + e++eeee e ee+e d e ee+    +++ ++d+e+e++++         k++ v kg                ++p
  MMETSP1325-20131115|5201_1  12 ARPVVEAEEDENEENDGEE------------GESEDDEEEEIESEEDEDDAEFEEEPSRPKKKPKKDTEKEKEKKtkepkpkkeKKERVEKGK--------------VKEP 96 
                 3443333332222222222............22222222233333333333333333333332222222222222111110000223333332..............1111 PP

>> PF07133.6  Merozoite surface protein (SPAM)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  25.9     0.004       6.8      47     143 ..      18     111 ..       9     112 .] 0.74

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.004
   PF07133.6  47 kqEdeeeeeeeeeneeieekeeeedeeEivEeeeeEeekkeeeekkeekdeekkqsneisneeikldskkDinaqnLisknykkndeskktaedivk 143
                  +E +e+ee++ e+ e e++eeee+e+E  E++ e ee+     kk +kd+ek+++   ++   k +++k ++  +   k+ kk d++k++ + i++
  MMETSP1325-20131115|5201_1  18 AEE-DENEENDGEEGESEDDEEEEIESEEDEDDAEFEEEPSRPKKKPKKDTEKEKEKKTKE--PKPKKEKKERVEKGKVKEPKKSDKAKESGDGIMT 111
                 333.344444445578888888999999999888888888888889999999999888888..5555555566666678999******999998886 PP

>> PF05764.8  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  24.2    0.0048       8.1      19     113 ..      17     100 ..      10     109 .. 0.35

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0048
   PF05764.8  19 eeeeeedevqkttsaldenllfeEeedDeefeeeeeeeeeeeDsdfddsedd.eeesddeeegekelekeekekkkk.rkkkkaykeplkkkkkkkk 113
                 e+ee+e+e  + +++        E edDee e e+ee+e+  D +f+++ +  +++ +++ e+eke++   ke k k +kk++  k ++k  +kk  
  MMETSP1325-20131115|5201_1  17 EAEEDENEENDGEEG--------ESEDDEEEEIESEEDED--DAEFEEEPSRpKKKPKKDTEKEKEKK--TKEPKPKkEKKERVEKGKVK-EPKKSD 100
                 344333333333333........44444444444433333..55666655533333333333333222..22122220122222222221.111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1583  (0.115784); expected 273.4 (0.02)
Passed bias filter:                      655  (0.0479081); expected 273.4 (0.02)
Passed Vit filter:                       200  (0.0146284); expected 13.7 (0.001)
Passed Fwd filter:                        94  (0.00687537); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.22u 0.37s 00:00:01.59 Elapsed: 00:00:00.61
# Mc/sec: 439.99
//
Query:       MMETSP1325-20131115|5205_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0004   18.4   0.0     0.0004   18.4   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.9e-08    0.0004     441     502 ..       4      74 ..       1      75 [] 0.80

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 2.9e-08
  PF03028.10 441 kqvlkdileklp.........klfdkeelkekltaeeekdplvvvlvqEiermnillkeirrslkelskgl 502
                  qv++di++k+p         +l+  ++l   ++  +  +p +vvl+qE+er+n l  ++  sl++l+k+l
  MMETSP1325-20131115|5205_1   4 GQVASDIASKVPlistdigtyDLMVTRKLLLDRNGGSAPTPCQVVLLQELERWNRLAIKMSVSLADLAKAL 74 
                 5677777777777776666665666666666676778889***************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|5202_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 690.15
//
Query:       MMETSP1325-20131115|5210_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1133  (0.0828701); expected 273.4 (0.02)
Passed bias filter:                      840  (0.0614394); expected 273.4 (0.02)
Passed Vit filter:                        88  (0.00643651); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 128.08
//
Query:       MMETSP1325-20131115|5209_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-11   42.5   0.0    1.1e-10   41.5   0.0    1.6  1  PF13524.1  Glycosyl transferases group 1
    2.6e-09   36.6   0.1    4.5e-09   35.8   0.1    1.4  1  PF00534.15 Glycosyl transferases group 1
    1.7e-07   31.3   0.0    2.3e-07   30.9   0.0    1.3  1  PF13692.1  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> PF13524.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   2.4e-14   1.1e-10       8      91 ..      83     186 ..      63     187 .. 0.93

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 2.4e-14
   PF13524.1   8 sespnlrlfEaaacGtpvvtddtsgleelfepgk....................eivlfe.dleelaeklryllanpeereaiaeaarervlaehtyehraeqll 91 
                 +e++nl ++Eaaa Gtpv+++ + g  + f+  +                    ++++ e + e+l +k++++++np  r++ a+aa e+v a++t e+  ++l+
  MMETSP1325-20131115|5209_1  83 AEGFNLPVLEAAAVGTPVICT-AGGPTDEFTRPEfalyveaqqvimedpdepewTAMVLEpSKEDLMAKMQFAIQNPMWRKKAAKAAVEFVHAKYTIEQITRRLM 186
                 389******************.8899999999999*******************9999999***************************************99998 PP

>> PF00534.15  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.1     1e-12   4.5e-09      73     167 ..      53     166 ..      45     171 .. 0.80

  Alignments for each domain:
  == domain 1    score: 35.8 bits;  conditional E-value: 1e-12
                 EE-----HHH....HHHHHTTECEEEE--SSB---HHHHHHHH----EEEE-TTBCCGGG-SSG....................GGEE-TT-HHHHHHHHHHHHH-HHHHHHHHH CS
  PF00534.15  73 dnvifvgevp.redleelyrnadifvlpsrsEgfGivllEAmaaglpviasnvggpaeivkdgv...................tGllvkpkdaealaeaiekllkdeelrerlge 167
                   v+++ge+    ++ el+ +ad +v   + Egf + +lEA a+g+pvi+++ g   e+ ++                     t  +++p   e+l ++++ +++++  r++ ++
  MMETSP1325-20131115|5209_1  53 GAVEYIGEQFsSAKIAELLAAADTYVSAYKAEGFNLPVLEAAAVGTPVICTAGGPTDEFTRPEFalyveaqqvimedpdepewTAMVLEPS-KEDLMAKMQFAIQNPMWRKKAAK 166
                 5788999998899***************999**********************99999999988777788777777777777666666664.67777777777777655555555 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0     5e-11   2.3e-07      48     129 ..      47     151 ..      22     157 .. 0.78

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 5e-11
   PF13692.1  48 arllep.nveflgfv...eelaellasadvglaplrfgeglplKlleylaaGlPvvasdigaegl...................peeegvgglv.addpeelaeal 129
                 ++l+e+  ve+ g+    + +aella+ad  +  ++ +eg++l +le++a+G+Pv+++  g+ ++                   p+e+++ ++v + ++e+l +++
  MMETSP1325-20131115|5209_1  47 RALFESgAVEYIGEQfssAKIAELLAAADTYVSAYK-AEGFNLPVLEAAAVGTPVICTAGGPTDEftrpefalyveaqqvimedPDEPEWTAMVlEPSKEDLMAKM 151
                 55633348999999887558***************5.99********************98777657777777777777776666666777766666777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.56
# Mc/sec: 885.80
//
Query:       MMETSP1325-20131115|5204_1  [L=455]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-28   96.4   0.0    3.9e-15   55.8   0.0    2.4  2  PF12796.2  Ankyrin repeats (3 copies)
    3.2e-23   80.2   0.0    4.6e-07   29.2   0.0    5.5  5  PF00023.25 Ankyrin repeat
    7.7e-19   67.5   0.0    1.3e-06   28.5   0.0    3.6  3  PF13637.1  Ankyrin repeats (many copies)
      1e-17   63.6   0.0    1.9e-09   37.3   0.0    4.5  5  PF13857.1  Ankyrin repeats (many copies)
      2e-17   61.4   0.0    1.8e-05   24.4   0.0    5.6  5  PF13606.1  Ankyrin repeat
     0.0091   15.0   0.1      0.015   14.3   0.1    1.4  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.0   5.1e-13   1.2e-09      16      82 ..     151     216 ..     123     223 .. 0.82
   2 !   55.8   0.0   1.7e-18   3.9e-15       2      82 ..     236     321 ..     235     327 .. 0.94

  Alignments for each domain:
  == domain 1    score: 38.2 bits;  conditional E-value: 5.1e-13
   PF12796.2  16 LlekgadvdlgetpLhlAaeagnleivklLle.agadvnakdkegntpLhlAvrnghlelvklLlekg 82 
                 L++ g+    ++tp h+ a+ g l+++k+Lle  gad+n  d  g tpL  A r++++e+v++L +kg
  MMETSP1325-20131115|5204_1 151 LVNLGDYD--NRTPAHISAAEGLLDVLKFLLEeCGADPNPVDRWGGTPLDDASRTEQIEVVEYLKTKG 216
                 34444444..599******************9778*****************************9886 PP

  == domain 2    score: 55.8 bits;  conditional E-value: 1.7e-18
   PF12796.2   2 hlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklL.leagadvnakdkegntpLhlAvrnghlelvklLlekg 82 
                 + Aa + n++ ++ L+ekga v++    ++tpLhlAa+  +le+vk+L leagad+n  d  g tpL  A+r +h ++v++L ++g
  MMETSP1325-20131115|5204_1 236 CDAAYTSNVDRLRELVEKGARVNIgdydKRTPLHLAASEAKLEVVKYLiLEAGADPNPLDRWGFTPLDDAMRGKHDDVVDFLDQHG 321
                 66999*******************9999999****************9568*******************************9997 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   3.3e-08   7.6e-05       1      32 [.     158     190 ..     158     191 .. 0.94
   2 !    6.8   0.0    0.0025       5.7       2      26 ..     193     217 ..     192     224 .. 0.83
   3 !    5.5   0.0    0.0062        14       9      32 ..     238     261 ..     235     262 .. 0.89
   4 !   29.2   0.0     2e-10   4.6e-07       1      32 [.     263     295 ..     263     296 .. 0.92
   5 !    9.6   0.0   0.00032      0.74       2      25 ..     298     321 ..     297     323 .. 0.94

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 3.3e-08
                 TSCBHHHHHHHTTHHHHHHHHHH.TTSSTTHBH CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLls.qGAdlnaqd 32 
                 d +TP H+ a  g l+v+k+Ll+ +GAd+n +d
  MMETSP1325-20131115|5204_1 158 DNRTPAHISAAEGLLDVLKFLLEeCGADPNPVD 190
                 689***************************887 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0025
                 SCBHHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGA 26 
                 G TPL  A++  ++evv++L  +G 
  MMETSP1325-20131115|5204_1 193 GGTPLDDASRTEQIEVVEYLKTKGG 217
                 56******************77765 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.0062
                 HHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   9 AalrgnlevvklLlsqGAdlnaqd 32 
                 Aa+  n++ ++ L+++GA +n+ d
  MMETSP1325-20131115|5204_1 238 AAYTSNVDRLRELVEKGARVNIGD 261
                 8888899999***********977 PP

  == domain 4    score: 29.2 bits;  conditional E-value: 2e-10
                 TSCBHHHHHHHTTHHHHHHHHHH.TTSSTTHBH CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLls.qGAdlnaqd 32 
                 d +TPLHlAa+   levvk+L+  +GAd+n  d
  MMETSP1325-20131115|5204_1 263 DKRTPLHLAASEAKLEVVKYLILeAGADPNPLD 295
                 568***************************766 PP

  == domain 5    score: 9.6 bits;  conditional E-value: 0.00032
                 SCBHHHHHHHTTHHHHHHHHHHTT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqG 25 
                 GfTPL  A +  + +vv +L ++G
  MMETSP1325-20131115|5204_1 298 GFTPLDDAMRGKHDDVVDFLDQHG 321
                 9*******************9988 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   7.7e-09   1.8e-05       2      53 ..     160     212 ..     159     212 .. 0.96
   2 !   25.9   0.0   3.9e-09   8.9e-06       5      54 .]     235     284 ..     232     284 .. 0.95
   3 !   28.5   0.0   5.9e-10   1.3e-06       2      39 ..     265     303 ..     264     317 .. 0.91

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 7.7e-09
   PF13637.1   2 ltaLhyaaisgrlelvklLlek.gidinrtdesGntaLhiAalrgnieilklL 53 
                 +t+ h  a+ g l+++k+Lle  g+d+n +d+ G t+L+ A ++++ie++++L
  MMETSP1325-20131115|5204_1 160 RTPAHISAAEGLLDVLKFLLEEcGADPNPVDRWGGTPLDDASRTEQIEVVEYL 212
                 8999999*************999****************************98 PP

  == domain 2    score: 25.9 bits;  conditional E-value: 3.9e-09
   PF13637.1   5 LhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 L  aa+ ++++ ++ L+ekg+ +n  d + +t+Lh+Aa+   +e++k+L+
  MMETSP1325-20131115|5204_1 235 LCDAAYTSNVDRLRELVEKGARVNIGDYDKRTPLHLAASEAKLEVVKYLI 284
                 567999*******************************************8 PP

  == domain 3    score: 28.5 bits;  conditional E-value: 5.9e-10
   PF13637.1   2 ltaLhyaaisgrlelvklLl.ekgidinrtdesGntaLh 39 
                 +t+Lh aa+   le+vk+L+ e g+d+n +d+ G+t+L+
  MMETSP1325-20131115|5204_1 265 RTPLHLAASEAKLEVVKYLIlEAGADPNPLDRWGFTPLD 303
                 79***************999799**************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   4.1e-07   0.00095       8      54 ..     153     198 ..     149     200 .. 0.87
   2 !    6.7   0.0    0.0035         8       4      35 ..     182     212 ..     181     229 .. 0.83
   3 !   37.3   0.0   8.4e-13   1.9e-09       1      54 [.     250     303 ..     250     305 .. 0.90
   4 !   15.4   0.0   6.3e-06     0.014       1      35 [.     284     317 ..     284     332 .. 0.93
   5 ?   -1.4   0.0       1.2   2.8e+03      14      28 ..     323     337 ..     318     339 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 4.1e-07
   PF13857.1   8 dvnatdeggntpLhlAakggalevvrlLl.apgadlnlrdsdgltald 54 
                 ++ ++d++  tp h+ a  g l+v+++Ll + gad+n  d +g t+ld
  MMETSP1325-20131115|5204_1 153 NLGDYDNR--TPAHISAAEGLLDVLKFLLeECGADPNPVDRWGGTPLD 198
                 33345555..************************************98 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0035
   PF13857.1   4 hgpadvnatdeggntpLhlAakggalevvrlL 35 
                 +g ad+n  d++g tpL  A +  + evv++L
  MMETSP1325-20131115|5204_1 182 CG-ADPNPVDRWGGTPLDDASRTEQIEVVEYL 212
                 66.77777788888****************99 PP

  == domain 3    score: 37.3 bits;  conditional E-value: 8.4e-13
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLl.apgadlnlrdsdgltald 54 
                 L+e+g a+vn  d  ++tpLhlAa+   levv++L+ ++gad+n  d +g t+ld
  MMETSP1325-20131115|5204_1 250 LVEKG-ARVNIGDYDKRTPLHLAASEAKLEVVKYLIlEAGADPNPLDRWGFTPLD 303
                 8999*.66666666666*************************************9 PP

  == domain 4    score: 15.4 bits;  conditional E-value: 6.3e-06
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlL 35 
                 +le+g ad+n +d++g+tpL  A +g + +vv++L
  MMETSP1325-20131115|5204_1 284 ILEAG-ADPNPLDRWGFTPLDDAMRGKHDDVVDFL 317
                 58999.**************************998 PP

  == domain 5    score: -1.4 bits;  conditional E-value: 1.2
   PF13857.1  14 eggntpLhlAakgga 28 
                 +++++pL lA ++ +
  MMETSP1325-20131115|5204_1 323 KSSTSPLQLAFHKKQ 337
                 56789****999765 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.4e-05     0.032       1      29 [.     158     187 ..     158     187 .. 0.92
   2 !    5.5   0.0    0.0095        22       2      25 ..     193     216 ..     192     220 .. 0.89
   3 ?    3.3   0.0     0.051   1.2e+02       9      30 .]     238     259 ..     235     259 .. 0.89
   4 !   24.4   0.0     8e-09   1.8e-05       2      29 ..     264     292 ..     263     292 .. 0.94
   5 !    6.1   0.0    0.0062        14       2      21 ..     298     317 ..     297     321 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.4e-05
   PF13606.1   1 nGnTpLhlAasngrielveaLle.ngadin 29 
                 +++Tp h+ a  g ++++++Lle +gad+n
  MMETSP1325-20131115|5204_1 158 DNRTPAHISAAEGLLDVLKFLLEeCGADPN 187
                 579*******************8589**98 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0095
   PF13606.1   2 GnTpLhlAasngrielveaLleng 25 
                 G TpL+ A +  +ie+ve+L  +g
  MMETSP1325-20131115|5204_1 193 GGTPLDDASRTEQIEVVEYLKTKG 216
                 669****************97665 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.051
   PF13606.1   9 AasngrielveaLlengadina 30 
                 Aa+  +++ +++L+e+ga +n+
  MMETSP1325-20131115|5204_1 238 AAYTSNVDRLRELVEKGARVNI 259
                 888899999*********9995 PP

  == domain 4    score: 24.4 bits;  conditional E-value: 8e-09
   PF13606.1   2 GnTpLhlAasngrielveaLl.engadin 29 
                  +TpLhlAas  ++e+v++L+ e+gad+n
  MMETSP1325-20131115|5204_1 264 KRTPLHLAASEAKLEVVKYLIlEAGADPN 292
                 59*******************889***98 PP

  == domain 5    score: 6.1 bits;  conditional E-value: 0.0062
   PF13606.1   2 GnTpLhlAasngrielveaL 21 
                 G TpL+ A++ ++ ++v++L
  MMETSP1325-20131115|5204_1 298 GFTPLDDAMRGKHDDVVDFL 317
                 89****************98 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   6.5e-06     0.015     220     259 .]       3      42 ..       1      42 [. 0.91

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 6.5e-06
                 TT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH CS
  PF07714.12 220 egkrlekpekcpeelyelmkqCweeepeeRptfkelvekl 259
                 +g r + ++++pe++ ++++ C+++ep++Rp+++e+ e+l
  MMETSP1325-20131115|5204_1   3 NGFRPRVQKHVPESISHMIEVCMSQEPQDRPNMREVLEFL 42 
                 567888899**************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.40s 00:00:01.14 Elapsed: 00:00:00.57
# Mc/sec: 1879.90
//
Query:       MMETSP1325-20131115|5211_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 301.94
//
Query:       MMETSP1325-20131115|5212_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.44s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|5214_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   13.5   0.0      0.057   13.4   0.0    1.1  1  PF10704.4 Protein of unknown function (DUF2508)


Domain annotation for each model (and alignments):
>> PF10704.4  Protein of unknown function (DUF2508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.2e-06     0.057      15      41 ..      20      46 ..       3      52 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.2e-06
   PF10704.4 15 eeLleliektkeeweeakkleensvdl 41
                +e+++l+++ k+++++a+++e+++ d 
  MMETSP1325-20131115|5214_1 20 AEMMALLDNSKKSLSSAQQAENKVRDG 46
                689*********************993 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.27u 0.44s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|5215_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.62
# Mc/sec: 274.42
//
Query:       MMETSP1325-20131115|5219_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-07   28.9   0.2      2e-06   27.2   0.2    1.6  2  PF00685.22 Sulfotransferase domain
    0.00025   20.9   0.0    0.00034   20.4   0.0    1.3  1  PF02026.11 RyR domain


Domain annotation for each model (and alignments):
>> PF00685.22  Sulfotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.2   2.9e-10     2e-06     152     215 ..       5      73 ..       2      90 .. 0.92
   2 ?   -1.4   0.0      0.17   1.1e+03       9      32 ..     125     148 ..     123     157 .. 0.80

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 2.9e-10
                 H-HHHHHHHHHHTCCCCCEEEEEHHHHHH-HHHHHHHHHHHTT--.....HHHHHHHTCHHHHHC-CCC CS
  PF00685.22 152 gsyfdhveewlklrkkgnvlflrYEdlkkdpakeikeiaeFlGip.....lekivkhlsfenmksnpvs 215
                 g+y++ + e++ +r++ nvl l +E +k d++ +i ++a F+G++     +ek+++ + ++ m +n+ +
  MMETSP1325-20131115|5219_1   5 GNYWEYMVEFYLCRNQSNVLCLPFEFMKDDLKAVIPKVATFMGVEcddalVEKVAELSHLDWMNKNEDK 73 
                 9************************************************99999999999999888865 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.17
                 STT---HHHHHHHHHHHTCCETTG CS
  PF00685.22   9 ypKSGttwlqellslitsegdfek 32 
                 +pK+G  + +++l++ + + d+++
  MMETSP1325-20131115|5219_1 125 TPKTGCATYKDMLDQCVADLDKST 148
                 7999*9999999999888887744 PP

>> PF02026.11  RyR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0     5e-08   0.00034      19      74 ..      52     110 ..      18     120 .. 0.85

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 5e-08
                 HTTHHHHHHHHHHHHHHHHH...T---B-----BTTTTB-TT-S-GGGS-HHHHHHHHH CS
  PF02026.11  19 eelveklAenyHeiWakkki...eegwtygevesekkkthplLvpYdtLtekekerdre 74 
                 ++lvek+Ae +H  W +k     +egw y e+ + ++   p L p  ++t+  k    e
  MMETSP1325-20131115|5219_1  52 DALVEKVAELSHLDWMNKNEdkfNEGWFYEEQLKYNRFDRPPLPPVAKVTKGSKVVPSE 110
                 479************9876556699********************99999888766544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 897.36
//
Query:       MMETSP1325-20131115|5222_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.60
# Mc/sec: 307.53
//
Query:       MMETSP1325-20131115|5223_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|5220_1  [L=500]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-40  139.1   0.0    2.5e-40  138.2   0.0    1.4  1  PF01915.17 Glycosyl hydrolase family 3 C-terminal domain
      5e-24   84.7   0.0    6.9e-24   84.2   0.0    1.2  1  PF00933.16 Glycosyl hydrolase family 3 N terminal domain
      7e-18   64.2   0.0    1.5e-17   63.1   0.0    1.5  1  PF14310.1  Fibronectin type III-like domain
  ------ inclusion threshold ------
      0.052   13.4   0.0        0.7    9.8   0.0    2.6  2  PF07705.6  CARDB


Domain annotation for each model (and alignments):
>> PF01915.17  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.2   0.0   7.4e-44   2.5e-40       2     226 ..     149     385 ..     148     386 .. 0.91

  Alignments for each domain:
  == domain 1    score: 138.2 bits;  conditional E-value: 7.4e-44
                 EEEEEGGG--S------......EEEEEESSHH................HHHHHHHHHHHHHHTTSS---EEEEEE.....T----HHHHHHHHH-SEEEE---......-S--B---B-SS--SGGGHHHHHHHHHHHHHT--EEEEE-SSGGGGGGGT.T-SEEEE------STTT---TTT----------SS-EE-SS..................................----EEE-------S- CS
                 xxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01915.17   2 VLLkNegnlLPLkkkkk......kiaviGpnadgtvksgggsgavnpsylvtplegirarlskakvvveekgseve.....ddeeiaeavaaakkaDvavvvvgewegegekeeeseegdrtdlalpenqdeLieavaaankpvvvvlhsggpvdmepwaekvkAilaawypGqegGnAiadvLfGdvnPsGkLPvtfpksledlpayynek................ekkrtyrydsedplypfgeGlsvg 226
                 VL kN++++LPL+kk+       ++av+G++a +++  gggsg+v ps l tpl+ i a l++a+   e+  +  +     dd++ ++ +a a+k Dv+ +++ + ++eg         dr++l+l++  d  +++va  + + v v+ + g+v m pwa++v+Ail  ++pG ++  A +dv +GdvnPs +LP+t+p  +++  +++++                    r y+ ++e+p++ fg Gls++
  MMETSP1325-20131115|5220_1 149 VLVKNDNGVLPLTKKSFwskddsSVAVFGNQASEPTVGGGGSGYVSPSWLPTPLATIHATLAQADYGAES--D--NvffgdDDTSVEDMQALASKVDVCFFFLATSSSEGG--------DRANLNLDA--DSYVSEVAPFCAQSVAVVTTPGAVLM-PWANQVDAILVNFMPGVAAAFATMDVVVGDVNPSARLPITMPMVENQEGMTTEQYpglddahnssytekwaFGYRYYHLHNEQPRFWFGDGLSYT 385
                 9***************99********************************************99764332..2..134788999999999**************8888887........*******86..789***********************.*********************************************777777665577777789999998876677788899*************8 PP

>> PF00933.16  Glycosyl hydrolase family 3 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.0     2e-27   6.9e-24     173     298 ..       2     107 ..       1     108 [. 0.87

  Alignments for each domain:
  == domain 1    score: 84.2 bits;  conditional E-value: 2e-27
                 ---HHHHHTTHHHHHHHH.H----EEEE--TTT---BGGG-HHHH---TTTT------EEES-TTSHHHHHH---HHHHHHHHH----BEES-S---SSHHHHHHHHH-----HHHHHHHHHHHHH CS
  PF00933.16 173 ideralreiyllpFeaavkkagvgsvMcaYnkvngspasenkklltklLreelgFdGfVvsDwlamkeiadhggaaesavealkAGlDiempgeerteelealkeavkngkvpeerlddsvrrilr 298
                 +der+  e+y +pF+aa+ +agvgs Mc+Ynk+n ++++en+++l+  L+ ++gF+GfV+sDw+          a++    +l+ GlD+em  +++ +   +l        +p e++d+sv+ril+
  MMETSP1325-20131115|5220_1   2 VDERTRYEMYYPPFQAAI-DAGVGSFMCSYNKINHVWSCENPETLKRDLKGKMGFEGFVMSDWG----------ATH--SPSLMEGLDQEMADADFMNY-GNLS------GMPIENIDESVKRILK 107
                 79999*************.*********************************************..........555..5699***********99643.3332......3477777777777775 PP

>> PF14310.1  Fibronectin type III-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.0   4.4e-21   1.5e-17       2      67 ..     417     481 ..     416     483 .. 0.97

  Alignments for each domain:
  == domain 1    score: 63.1 bits;  conditional E-value: 4.4e-21
   PF14310.1   2 vvQlYvsdpegsverpvkqLkgFekveLapGesetvtitldrkdlsvwdeeaqnwvveaGeytvlv 67 
                 v QlY+s+p++  ++p   LkgFek eL++Ges+tvt++l+ +dls+w+++a +w   +G+yt  v
  MMETSP1325-20131115|5220_1 417 VPQLYLSPPAA-CDEPLFMLKGFEKLELDAGESQTVTFKLTDRDLSTWSVDAFDWARCSGNYTARV 481
                 89********9.9*************************************************9887 PP

>> PF07705.6  CARDB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.28   9.7e+02      50      91 ..     229     270 ..     204     272 .. 0.67
   2 ?    9.8   0.0   0.00021       0.7      12      73 ..     391     461 ..     384     488 .. 0.76

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.28
                 EEEEES-B-BT-EEEEEEEEE----S-EEEEEEE-TT-SS-- CS
   PF07705.6  50 stvtvpsLaagesttvsftwtpategnvtlkvvvDpdnevaE 91 
                 s  + + La++  + + f  t ++eg  + +++ D d++v+E
  MMETSP1325-20131115|5220_1 229 SVEDMQALASKVDVCFFFLATSSSEGGDRANLNLDADSYVSE 270
                 333445666666666666666668899999999999999998 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00021
                 -SCE-TTSEEEEEEEEEE-----B--EEEEEEE---EEEEEEE........S-B-BT-EEEEEEEEE--..- CS
   PF07705.6  12 pseayagenvtitvtvkNqGtaasgsfkvrlylngelvstvtv........psLaagesttvsftwtpa..t 73 
                   +++ +++++it++v+N G++  g++  +lyl+   + + ++         +L ages+tv+f+ t +  +
  MMETSP1325-20131115|5220_1 391 TDSLSWNKDSKITAKVTNAGDS-RGAVVPQLYLSPPAACDEPLfmlkgfekLELDAGESQTVTFKLTDRdlS 461
                 56777899***********975.6899999*******9889999999999999***********98876441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.81u 0.37s 00:00:01.18 Elapsed: 00:00:00.99
# Mc/sec: 1210.28
//
Query:       MMETSP1325-20131115|5225_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-08   34.3   8.7    2.2e-08   33.9   6.1    1.2  1  PF00412.17 LIM domain
  ------ inclusion threshold ------
        0.4   10.2   4.3       0.19   11.2   0.5    1.9  2  PF07282.6  Putative transposase DNA-binding domain
       0.55    9.5   0.1       0.55    9.5   0.1    2.5  3  PF00320.22 GATA zinc finger
       0.84    9.3  12.7         11    5.7   8.8    2.5  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
        2.7    7.6   9.6         19    5.0   6.6    2.4  1  PF13639.1  Ring finger domain
        2.9    7.5  12.5       0.48   10.0   2.8    2.5  2  PF13920.1  Zinc finger, C3HC4 type (RING finger)
        3.9    7.0  11.2         45    3.7   7.8    2.6  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
        7.5    6.2  13.4        1.9    8.1   0.5    3.1  2  PF14446.1  Prokaryotic RING finger family 1
        8.4    6.1   9.1        9.6    5.9   0.3    2.3  2  PF00130.17 Phorbol esters/diacylglycerol binding domain (C1 domain)


Domain annotation for each model (and alignments):
>> PF00412.17  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   6.1   1.4e-11   2.2e-08       1      56 [.       4      58 ..       4      60 .. 0.88

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 1.4e-11
                -TTT-----TTSC.EEEETTEEEECCC-B-TTT-SB-----EEEETTEEEEHHHHHH CS
  PF00412.17  1 CagCnkkiadrel.vlkaldkvyHeeCFtCseCqkplkeksffekdgklyCkkdylk 56
                C++C+ ki +++    k++d +yH+ C++C+ C+ pl++    ek+g l+Ck++ lk
  MMETSP1325-20131115|5225_1  4 CKACKLKIDPTCQqGAKVKDATYHRTCLICAGCDAPLTQV--AEKEGHLLCKECLLK 58
                *********665414589********************98..7***********876 PP

>> PF07282.6  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.37   5.6e+02      48      57 ..       3      12 ..       2      13 .. 0.79
   2 ?   11.2   0.5   0.00013      0.19      15      55 ..      17      58 ..      10      61 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.37
   PF07282.6 48 kCpnCgfead 57
                +C++C++++d
  MMETSP1325-20131115|5225_1  3 TCKACKLKID 12
                5889988876 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00013
   PF07282.6 15 yGikvievnpayTSktCsvCgsknke.alsgrlfkCpnCgfe 55
                +G kv+ +  + T   C+ C +  ++ a+++  + C++C ++
  MMETSP1325-20131115|5225_1 17 QGAKVKDATYHRTCLICAGCDAPLTQvAEKEGHLLCKECLLK 58
                788999999999***************************987 PP

>> PF00320.22  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.17   2.5e+02      23      28 ..       4       9 ..       2      11 .. 0.82
   2 ?   -3.4   0.8       3.8   5.8e+03      22      26 ..      32      36 ..      27      37 .. 0.62
   3 ?    9.5   0.1   0.00036      0.55      16      30 ..      46      59 ..      44      64 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.17
                SSHHHH CS
  PF00320.22 23 CnaCgl 28
                C+aC l
  MMETSP1325-20131115|5225_1  4 CKACKL 9 
                9***77 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 3.8
                -SSHH CS
  PF00320.22 22 LCnaC 26
                +C  C
  MMETSP1325-20131115|5225_1 32 ICAGC 36
                56666 PP

  == domain 3    score: 9.5 bits;  conditional E-value: 0.00036
                SS-----SSHHHHHH CS
  PF00320.22 16 psgnrtLCnaCglyy 30
                ++g+  LC+ C l+y
  MMETSP1325-20131115|5225_1 46 KEGHL-LCKECLLKY 59
                689**.*******99 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   8.8    0.0076        11       3      36 ..      28      62 ..       1      71 [. 0.72

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0076
   PF13923.1  3 fsCpiC..leelenpviltpCgHlyCkkCieqwlek 36
                ++C iC  ++ +    ++ + gHl+Ck+C+ +++++
  MMETSP1325-20131115|5225_1 28 RTCLICagCDAPLTQ-VAEKEGHLLCKECLLKYMQT 62
                456666322222223.346668************98 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   6.6     0.012        19       3      37 ..      30      63 ..       2      68 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.012
   PF13639.1  3 CaiCldelsegeevvrlpC...........gHvfHeeCldewlrss 37
                C iC              C           gH+ ++eCl ++++++
  MMETSP1325-20131115|5225_1 30 CLICAG------------CdapltqvaekeGHLLCKECLLKYMQTK 63
                333322............355555555566************9985 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   5.0      0.55   8.3e+02      25      43 ..       3      33 ..       2      43 .. 0.78
   2 ?   10.0   2.8   0.00032      0.48       3      35 ..      28      61 ..      26      70 .. 0.77

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.55
   PF13920.1 25 lCeeCaerllk............rkkkCpiC 43
                +C++C  ++               +++C iC
  MMETSP1325-20131115|5225_1  3 TCKACKLKIDPtcqqgakvkdatYHRTCLIC 33
                5899998885577788888888878888888 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00032
   PF13920.1  3 ktCvvClerea..dvlllpCgHlclCeeCaerllk 35
                +tC +C   +a  + +  + gHl lC+eC  ++++
  MMETSP1325-20131115|5225_1 28 RTCLICAGCDAplTQVAEKEGHL-LCKECLLKYMQ 61
                68***997655115666689***.******99975 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   7.8      0.03        45      12      31 ..      43      61 ..       4      69 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.03
                E.BSCTS-EE-CHHHHHHHC CS
  PF00097.20 12 nelleCkHsfCskCirkilk 31
                + + + +H +C++C++k+++
  MMETSP1325-20131115|5225_1 43 V-AEKEGHLLCKECLLKYMQ 61
                3.45569***********99 PP

>> PF14446.1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   6.6       1.1   1.7e+03      28      37 ..      23      32 ..       2      40 .. 0.61
   2 ?    8.1   0.5    0.0013       1.9       7      31 ..      32      59 ..      31      62 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.1
   PF14446.1 28 gapyHreCwe 37
                 a+yHr+C  
  MMETSP1325-20131115|5225_1 23 DATYHRTCLI 32
                5899999983 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0013
   PF14446.1  7 rCavCgkklk...dkddivvCpeCgapy 31
                 Ca C+ +l+   +k+  + C+eC ++y
  MMETSP1325-20131115|5225_1 32 ICAGCDAPLTqvaEKEGHLLCKECLLKY 59
                599999876522268999******9999 PP

>> PF00130.17  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.3    0.0063       9.6      30      47 ..       3      20 ..       2      25 .. 0.83
   2 ?    4.0   1.9     0.024        37       9      36 ..      28      57 ..      22      60 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0063
                EETTT--B--STT----- CS
  PF00130.17 30 kCswCqllvHkkCfekvp 47
                +C++C+l++   C + ++
  MMETSP1325-20131115|5225_1  3 TCKACKLKIDPTCQQGAK 20
                59*******999988665 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.024
                SS--B-TTT-SB---.-----.-EETTT-- CS
  PF00130.17  9 kqptfCkhCgkflwg.kgkqg.lkCswCql 36
                + +  C+ C+ +l +  +k g l C++C l
  MMETSP1325-20131115|5225_1 28 RTCLICAGCDAPLTQvAEKEGhLLCKECLL 57
                55778********66655554389999966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.70
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|5226_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|5227_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.6e-36  121.6   0.0    1.2e-35  121.3   0.0    1.1  1  PF07109.6 Magnesium-protoporphyrin IX methyltransferase C-terminus
    6.5e-06   25.6   0.0    9.4e-06   25.1   0.0    1.3  1  PF13847.1 Methyltransferase domain
    0.00018   21.1   0.0    0.00025   20.6   0.0    1.3  1  PF13489.1 Methyltransferase domain
  ------ inclusion threshold ------
      0.027   14.8   0.0      0.047   14.0   0.0    1.4  1  PF08242.7 Methyltransferase domain
      0.036   14.3   0.0      0.053   13.7   0.0    1.3  1  PF13649.1 Methyltransferase domain
      0.067   12.9   0.0       0.62    9.8   0.0    2.1  2  PF13670.1 Peptidase propeptide and YPEB domain


Domain annotation for each model (and alignments):
>> PF07109.6  Magnesium-protoporphyrin IX methyltransferase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.3   0.0   5.3e-39   1.2e-35       1      97 []      40     136 ..      40     136 .. 0.99

  Alignments for each domain:
  == domain 1    score: 121.3 bits;  conditional E-value: 5.3e-39
   PF07109.6   1 alDvlIhYpaedaakvlshlasltkerivltfAPktallallkkiGklfprssrataiylhaekeleralselgwkiareervstgfyiskllelvr 97 
                 ++Dv+IhYp+e+++ ++shlasl +e+++++fAPkt+++ +lkkiG+lfp++s++t++ylh+e+++++al+++g+ki+r++ ++t+fy+s lle+vr
  MMETSP1325-20131115|5227_1  40 CIDVMIHYPTEKMTDMVSHLASLSDEKLLISFAPKTPAYVALKKIGELFPGPSKTTRAYLHPEEDVRAALEKAGFKIERSKLTATNFYFSTLLEAVR 136
                 9*********************************************************************************************997 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   4.1e-09   9.4e-06      36      94 ..       1      60 [.       1      96 [. 0.83

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 4.1e-09
   PF13847.1 36 iseeaielAkeraqklgfenveFiqgdieeleklleesfDlvisnevl.....naladpqkvlk 94
                is+ + + A++ra++lg++ ++F+++d+e+++     ++Dlv++ +v+     + ++d+ + l 
  MMETSP1325-20131115|5227_1  1 ISAAMAQEATRRAEELGVTGASFEASDLESVN----GKYDLVTCIDVMihyptEKMTDMVSHLA 60
                6788999***********************99....99*******9997666655555555444 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.1e-07   0.00025      66     160 ..      21     117 ..       2     119 .. 0.68

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 1.1e-07
   PF13489.1  66 sqfdeedaaepagkfdlivarevlehvp..dpeellrqiaellkpgGylllstpnasla.sdeafakw.dylvprgthisffsaeslkelleeaGfeiv 160
                  +f + d +  +gk+dl+++++v+ h p    + +++++a+ l ++ +l+   p  + + + ++  ++     +  t  +++ +e+++ +le+aGf+i+
  MMETSP1325-20131115|5227_1  21 ASFEASDLESVNGKYDLVTCIDVMIHYPteKMTDMVSHLAS-LSDEKLLISFAPKTPAYvALKKIGELfPGPSK-TTRAYLHPEEDVRAALEKAGFKIE 117
                 5566667778899**************84447788888888.55555554444543322244444444233333.2777999***************97 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.1e-05     0.047      30      90 ..       3      60 ..       1      64 [. 0.64

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.1e-05
   PF08242.7 30 psaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl..kdirevldnir 90
                +++    +e +++ e+  ++   +ea dl++  g  ++D+v++++v+ h   +++++++++++
  MMETSP1325-20131115|5227_1  3 AAMA---QEATRRAEELGVTGASFEASDLESVNG--KYDLVTCIDVMIHYptEKMTDMVSHLA 60
                4444...344444444445556666666555544..**********99987888877777766 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.3e-05     0.053      33      97 ..       2      63 ..       1      66 [. 0.72

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.3e-05
   PF13649.1 33 seealelakerlsskglkvkfvqadaralpfeegefdlvvcaglslehlspkqlealleeiarvl 97
                s+ + ++a +r+++ g  v+     a +l+  +g++dlv+c   ++ h+  +++ ++++++a++ 
  MMETSP1325-20131115|5227_1  2 SAAMAQEATRRAEELG--VTGASFEASDLESVNGKYDLVTC-IDVMIHYPTEKMTDMVSHLASLS 63
                6666677777775555..444444446688899********.56688889999999999999875 PP

>> PF13670.1  Peptidase propeptide and YPEB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.15   3.4e+02      31      52 ..       6      27 ..       2      52 .. 0.81
   2 ?    9.8   0.0   0.00027      0.62      25      53 ..      96     124 ..      70     128 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.15
   PF13670.1 31 reavqakleaqGykvkkievdd 52
                 +++ +++e+ G +  ++e+ d
  MMETSP1325-20131115|5227_1  6 AQEATRRAEELGVTGASFEASD 27
                5788889999998888888844 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00027
   PF13670.1  25 kadwlsreavqakleaqGykvkkievddg 53 
                 +a   ++e+v+a+le++G+k+++ +++  
  MMETSP1325-20131115|5227_1  96 RAYLHPEEDVRAALEKAGFKIERSKLTAT 124
                 5566799***************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 607.96
//
Query:       MMETSP1325-20131115|5217_1  [L=1005]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1005 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.36u 0.34s 00:00:01.70 Elapsed: 00:00:00.95
# Mc/sec: 2535.09
//
Query:       MMETSP1325-20131115|5229_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       845  (0.0618051); expected 273.4 (0.02)
Passed bias filter:                      605  (0.044251); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 630.88
//
Query:       MMETSP1325-20131115|5228_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-41  141.4   0.2    3.5e-41  140.8   0.2    1.2  1  PF00378.15 Enoyl-CoA hydratase/isomerase family


Domain annotation for each model (and alignments):
>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.8   0.2   2.5e-45   3.5e-41       4     237 ..       6     251 ..       3     259 .. 0.87

  Alignments for each domain:
  == domain 1    score: 140.8 bits;  conditional E-value: 2.5e-45
                 -----EEEEE-----S----HHHHHHHHHHHHHHHH-TT----EEE----SSB----HHHCHHH..........-CHHHH---HHHHHHHHHHHT-SS--EEEE---B-----HHHHHSSEEEEETT-EE--CCCC-----------HHHHH---HH.HHHHHH----EEHHHHHHTTSSSEEE-..GCC---HHHHHHHHHH--S--SS-HHHHHHH..HHHH------------HCHHHHHHHHH CS
  PF00378.15   4 lengvavikldrpekvNalsaelleelkealekleadksikaivlsggekaFsaGaDikelaae..........teaeqaqlseeaqklvekledlekpvvAavnGaalGGGlelalacdyriaadeakfglpevklGilpgaggtqrlprlvGvsa.AlemiltgrriradeAlkvGlvdkvvp..eeelveeaielakrladkpklalallkkamraalekalsevrkqelklypallakedvke 237
                   ++vavi l rpek Na++  + ++   +++++ ++   +aiv++g+ k+FsaG+D  + +                ++   + +q+ +++ e  ++pv+Aav G ++G+G+ l  acd+r+++ ++ f+  ev+lG+ ++ g  qrlp+ vG ++  +e++ tg+++ a+ A+++Glv++vv   ++e++++a++la+++ad+++ a+  +k+ +  a +++++  ++  ++ + a l++ed + 
  MMETSP1325-20131115|5228_1   6 CDGAVAVIELARPEKRNAMDSRFWRDYPLVIKACVESGA-RAIVVCGQGKCFSAGLDTSDESLTlfqedsdvarMGIAKRRQVQMMQDCLTAAEAAPVPVIAAVHGPCVGAGVDLITACDVRLCSSDSYFSVREVRLGLAADVGTLQRLPKVVGNASlLRELCFTGDDFDAAVAKDMGLVSRVVDggRDEVLAAALTLAEHIADQSPVAIVGTKANLLYARDHTVADGLDYVATWNMAGLQSEDLQV 251
                 6789********************************998.9****************87644333432343332222333444678899999999***********************************************************8752689***********************988999************************999988888888888888888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.55
# Mc/sec: 1167.68
//
Query:       MMETSP1325-20131115|5232_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-24   83.6   0.1    9.4e-24   83.5   0.1    1.0  1  PF01704.13 UTP--glucose-1-phosphate uridylyltransferase


Domain annotation for each model (and alignments):
>> PF01704.13  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.5   0.1   6.9e-28   9.4e-24      52     144 ..       4      97 ..       1      98 [] 0.93

  Alignments for each domain:
  == domain 1    score: 83.5 bits;  conditional E-value: 6.9e-28
                 HHTT-EEEEEEE----------S-----B-HHHH....HHHHHHHH..CC------EEEEE----HHHHHHHHHHT----GG.EEEEE---EE- CS
  PF01704.13  52 kllnklavlkLnGglgtslGvkgpkslievregitfLDlkvqqieelnkkynvdvPlllmnSfnTeeetkkilekYsglkve.iktfqQsryPr 144
                 +ll+  +vlkLnGglgt +G   +ksl+ v+ + tfLDl+ +q+ ++ k y+ +v ++lmnSf T+++t ++l+kY +   +    f Q + P+
  MMETSP1325-20131115|5232_1   4 SLLKESVVLKLNGGLGTGMGLDFAKSLLKVKGNDTFLDLTAKQVISMRKAYKQNVRFVLMNSFSTSSDTMEFLQKYPDIVSDpDLEFVQNKVPK 97 
                 678888**********************************************************************998877666788888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|5233_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.4   11.0   9.8       0.43   10.9   6.8    1.1  1  PF07172.6  Glycine rich protein family
        1.6    8.8   4.9        1.9    8.6   3.4    1.1  1  PF09806.4  Cyclin-dependent kinase 2-associated protein
        1.8    7.8   7.9        1.6    7.9   5.5    1.1  1  PF04592.9  Selenoprotein P, N terminal region


Domain annotation for each model (and alignments):
>> PF07172.6  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   6.8   9.4e-05      0.43      23      72 ..      13      62 ..       5      72 .] 0.52

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 9.4e-05
   PF07172.6 23 vaaaelskeeksekeeevkdekyggggkh.....ggGgygggggggngGGGykgg 72
                 +a++ ++ + +e+e+e +++ ++    h     g +g + ggg+g +GGG +++
  MMETSP1325-20131115|5233_1 13 SKAQDDEHAHEQEHEQEHQQTAQYQ---HdeltpG-SGSTSGGGNG-DGGGENKK 62
                3444445555555555555555544...3345633.3333333333.46665554 PP

>> PF09806.4  Cyclin-dependent kinase 2-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.4   0.00041       1.9      29      75 ..      19      68 ..      10      71 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00041
   PF09806.4 29 e...sqkqreerekqaqvesnhrgrssvsgsagssssnssalrarsskqs 75
                e   +q++++e+++ aq ++ + + +s s+s+g + ++ ++++   ++++
  MMETSP1325-20131115|5233_1 19 EhahEQEHEQEHQQTAQYQHDELTPGSGSTSGGGNGDGGGENKKAAERSN 68
                2343566666677788999****************999987776655544 PP

>> PF04592.9  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   5.5   0.00036       1.6     182     217 ..       5      40 ..       1      69 [. 0.60

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00036
   PF04592.9 182 rkdlekhhshrkldsekekhkhshehlgssslkesq 217
                  ++  +h+s+ + d ++++++h++eh+++++ ++++
  MMETSP1325-20131115|5233_1   5 LQEEYRHESKAQDDEHAHEQEHEQEHQQTAQYQHDE 40 
                 444455556666677777777777777755544432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1391  (0.101741); expected 273.4 (0.02)
Passed bias filter:                      949  (0.0694119); expected 273.4 (0.02)
Passed Vit filter:                       108  (0.00789936); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.45s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|5235_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 412.71
//
Query:       MMETSP1325-20131115|5236_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|5237_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.2   3.9       0.54    9.8   0.2    2.3  2  PF01304.12 Gas vesicles protein GVPc repeated domain
  ------ inclusion threshold ------
       0.49   10.1   2.1        2.3    8.0   0.1    2.1  2  PF10389.4  Bacteriophage coat protein B


Domain annotation for each model (and alignments):
>> PF01304.12  Gas vesicles protein GVPc repeated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.3   8.6e-05      0.59      19      30 ..       2      13 ..       1      14 [. 0.87
   2 !    9.8   0.2   7.9e-05      0.54      19      30 ..      23      34 ..      22      35 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 8.6e-05
  PF01304.12 19 RlaQAkkQaqeL 30
                R+aQAk+Q ++L
  MMETSP1325-20131115|5237_1  2 RSAQAKAQVTAL 13
                9*******7776 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 7.9e-05
  PF01304.12 19 RlaQAkkQaqeL 30
                R+aQAk+Q ++L
  MMETSP1325-20131115|5237_1 23 RSAQAKAQVTAL 34
                9*******7776 PP

>> PF10389.4  Bacteriophage coat protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1   0.00034       2.3      17      33 ..       5      21 ..       4      22 .. 0.93
   2 ?    1.9   0.1     0.027   1.9e+02      17      27 ..      26      36 ..      24      37 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00034
   PF10389.4 17 aAkadiatiGgaVLtvv 33
                 Aka ++++G a L+vv
  MMETSP1325-20131115|5237_1  5 QAKAQVTALGSARLSVV 21
                59*************98 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.027
   PF10389.4 17 aAkadiatiGg 27
                 Aka ++++G 
  MMETSP1325-20131115|5237_1 26 QAKAQVTALGL 36
                59******996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.32s 00:00:00.64 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|5238_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|5241_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.88
# Mc/sec: 220.57
//
Query:       MMETSP1325-20131115|5242_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-24   84.3   0.0      7e-24   84.0   0.0    1.0  1  PF02990.11 Endomembrane protein 70
  ------ inclusion threshold ------
      0.091   12.5   0.0       0.12   12.0   0.0    1.3  1  PF12550.3  Transcriptional activator of glycolytic enzymes
       0.21   11.3   1.1        2.1    8.1   0.1    2.0  2  PF12621.3  Phosphate metabolism protein


Domain annotation for each model (and alignments):
>> PF02990.11  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   0.0   1.5e-27     7e-24       1      89 [.      36     122 ..      36     129 .. 0.96

  Alignments for each domain:
  == domain 1    score: 84.0 bits;  conditional E-value: 1.5e-27
  PF02990.11   1 ltYeyyslpfcrpektikkksesLgevlrgdrivespyklkfleekecevlckkkltkeevkllkkaikeeyvvqwliddlpvatkvek 89 
                 ++Y+yyslp+c+p+  i+++se+Lge l+gdri +s ykl+++  + ce++ckk  +k++++++ +ai++ey  +w++d+lpv t v++
  MMETSP1325-20131115|5242_1  36 IPYDYYSLPYCHPH--IHEESENLGERLSGDRIENSLYKLEMKIPQACEIVCKKSYNKAQAAQFVEAIDQEYRAHWIVDNLPVSTVVIN 122
                 59**********98..79******************************************************************99876 PP

>> PF12550.3  Transcriptional activator of glycolytic enzymes
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.7e-05      0.12      17      80 ..      39     101 ..      23     102 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.7e-05
   PF12550.3  17 EwteglngqpsiksleekygsrWrrdskerktfsrRkriidfIerllkkkgiseeeaieilekl 80 
                 +++      p i++  e+ g+r++ d  e+++++  ++i ++ e  + kk +++ +a++ +e +
  MMETSP1325-20131115|5242_1  39 DYYSLPYCHPHIHEESENLGERLSGDRIENSLYKLEMKIPQACEI-VCKKSYNKAQAAQFVEAI 101
                 56666667899*********************************5.9999**********9976 PP

>> PF12621.3  Phosphate metabolism protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.1   0.00047       2.1       3      46 ..      12      55 ..      10      57 .. 0.92
   2 ?    2.3   0.0     0.031   1.4e+02       6      65 ..      66     124 ..      63     128 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00047
   PF12621.3  3 kpeiyasyralrkllpegynleeeyeeeveknaYlhPavtakep 46
                 p+ ya  ++++  +++ +++  +++ ++ +  Y+hP + ++ +
  MMETSP1325-20131115|5242_1 12 APHSYARKDKVKLFVNKLTSTHTQIPYDYYSLPYCHPHIHEESE 55
                69*******************99***************988765 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.031
   PF12621.3   6 iyasyralrkllpegynleeeyeeeveknaYlhPavtakepllWiprDpmglSrqeieet 65 
                 i++s+ +l  ++p+  +   +++ ++++ a +  a+ ++ +  Wi+ D++ +S+  i+e+
  MMETSP1325-20131115|5242_1  66 IENSLYKLEMKIPQACEIVCKKSYNKAQAAQFVEAIDQEYRAHWIV-DNLPVSTVVINEL 124
                 5666777778888888887788888889999999999999999997.9999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       559  (0.0408865); expected 273.4 (0.02)
Passed bias filter:                      494  (0.0361322); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 677.23
//
Query:       MMETSP1325-20131115|5243_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0057   16.7   0.3     0.0083   16.1   0.2    1.2  1  PF11488.3 Transcriptional regulatory protein LGE1


Domain annotation for each model (and alignments):
>> PF11488.3  Transcriptional regulatory protein LGE1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.2     6e-07    0.0083      24      66 ..       8      50 ..       4      53 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 6e-07
   PF11488.3 24 klrsrvkelesldkeleelksqklklelelalletqvdrdaln 66
                +++ +v++l+s+d+ l+  +++   +e+ l++  ++v +++l+
  MMETSP1325-20131115|5243_1  8 RFQGVVNDLQSKDQDLKRSQRKLAANEKKLKSQASEVMSLGLQ 50
                68999********************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       879  (0.064292); expected 273.4 (0.02)
Passed bias filter:                      746  (0.0545641); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.61
# Mc/sec: 408.56
//
Query:       MMETSP1325-20131115|5244_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|5240_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-09   37.4   0.0    3.5e-09   36.9   0.0    1.3  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   2.6e-13   3.5e-09      11      45 ..      32      75 .]      18      75 .] 0.85

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 2.6e-13
                XXXX.XXXXXX.---........-TTTTT--------TTT---- CS
  PF00504.16 11 gdlg.fDplglskdp........tlkrlreaEliHGRvAMlavl 45
                + lg +Dplg sk          t+ +lr+aE++HGRvAM+a+l
  MMETSP1325-20131115|5240_1 32 AGLGfWDPLGCSKMSfwtlsneeTIGYLRHAEIKHGRVAMAAFL 75
                44569*******888999999*********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.64
# Mc/sec: 280.82
//
Query:       MMETSP1325-20131115|5248_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00097   18.7   2.5        0.4   10.7   0.2    3.2  3  PF00560.28 Leucine Rich Repeat
     0.0022   17.6   0.5      0.018   14.6   0.3    2.2  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.028   13.9   1.7       0.36   10.4   0.8    2.5  2  PF12799.2  Leucine Rich repeats (2 copies)
      0.094   12.1   0.6        2.6    7.5   0.2    2.4  2  PF07873.6  YabP family
       0.22   11.5   2.3        9.8    6.4   0.1    3.0  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.4   3.9e+03      11      11 ..      11      11 ..       4      21 .. 0.54
   2 !   10.7   0.2   0.00014       0.4       1      21 [.      23      44 ..      23      45 .. 0.88
   3 !    6.7   0.0     0.003       8.1       2      13 ..      47      58 ..      46      75 .] 0.70

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.4
                B CS
  PF00560.28 11 n 11
                n
  MMETSP1325-20131115|5248_1 11 N 11
                3 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00014
                TESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.slppslsn 21
                n+e+L+L g+ +l+ ++ + l+ 
  MMETSP1325-20131115|5248_1 23 NIESLNLEGCrKLQgNIES-LKD 44
                799***********99998.765 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.003
                ESEEEETSSBCB CS
  PF00560.28  2 LeeLdLsgNnlt 13
                L++L+Lsg +++
  MMETSP1325-20131115|5248_1 47 LQVLNLSGYKMK 58
                9******97444 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0043        12      42      60 ..      16      33 ..       4      35 .. 0.73
   2 !   14.6   0.3   6.6e-06     0.018       2      49 ..      23      70 ..      23      75 .] 0.80

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0043
   PF13855.1 42 peafkgLpsLreLnLsgNr 60
                 e+fk++ ++++LnL+g+r
  MMETSP1325-20131115|5248_1 16 IEVFKDM-NIESLNLEGCR 33
                4678888.88899988875 PP

  == domain 2    score: 14.6 bits;  conditional E-value: 6.6e-06
   PF13855.1  2 nLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnnlk.sispeafkgLp 49
                n+++L+L ++ +l+ +i+  ++k+++ L+vL+Lsg + k + + e++k++p
  MMETSP1325-20131115|5248_1 23 NIESLNLEGCrKLQgNIE--SLKDCP-LQVLNLSGYKMKfTGDIESLKDCP 70
                6899****9977776666..9****9.*********999444558888885 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.8   0.00013      0.36       2      35 ..      23      56 ..       4      68 .. 0.68
   2 ?    5.3   0.0     0.005        14       3      25 ..      47      68 ..      47      75 .] 0.57

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00013
   PF12799.2  2 nLevLdLsnNn.Ik.dlppelanLpn..LktLnLsnNp 35
                n e+L+L +++ ++ +++     L++  L++LnLs+ +
  MMETSP1325-20131115|5248_1 23 NIESLNLEGCRkLQgNIES----LKDcpLQVLNLSGYK 56
                6777888887524444444....554449999999844 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.005
   PF12799.2  3 LevLdLsnNnIkdlppelanLpn 25
                L+vL+Ls+ + k  +  + +L++
  MMETSP1325-20131115|5248_1 47 LQVLNLSGYKMKFTGD-IESLKD 68
                7888888877664333.444443 PP

>> PF07873.6  YabP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.2   0.00095       2.6      42      63 ..      20      42 ..      11      43 .. 0.91
   2 ?    2.3   0.0      0.04   1.1e+02      44      63 ..      47      66 ..      46      67 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00095
                ------SSSS--.EEE-----EE CS
   PF07873.6 42 enLkikklnlee.lvieGkIksl 63
                ++++i++lnle   +++G+I+sl
  MMETSP1325-20131115|5248_1 20 KDMNIESLNLEGcRKLQGNIESL 42
                79**********9********98 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.04
                ----SSSS--EEE-----EE CS
   PF07873.6 44 LkikklnleelvieGkIksl 63
                L++ +l+  +++ +G I+sl
  MMETSP1325-20131115|5248_1 47 LQVLNLSGYKMKFTGDIESL 66
                7888899999*******998 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.6     7e+03       4      11 ..       5      14 ..       4      16 .. 0.50
   2 ?    6.4   0.1    0.0036       9.8       3      13 ..      23      33 ..      23      44 .. 0.83
   3 ?    4.1   0.0      0.02        56       4      11 ..      47      54 ..      45      72 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 2.6
   PF13516.1  4 LtsL..dLsn 11
                L++L  ++ +
  MMETSP1325-20131115|5248_1  5 LRVLrtNIEG 14
                5566444544 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0036
   PF13516.1  3 nLtsLdLsnNq 13
                n++sL+L ++ 
  MMETSP1325-20131115|5248_1 23 NIESLNLEGCR 33
                89******996 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.02
   PF13516.1  4 LtsLdLsn 11
                L++L+Ls+
  MMETSP1325-20131115|5248_1 47 LQVLNLSG 54
                99****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 315.31
//
Query:       MMETSP1325-20131115|5250_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-18   67.6   0.2    1.3e-18   67.4   0.1    1.0  1  PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain
    3.5e-08   33.6   0.1    4.1e-08   33.4   0.1    1.0  1  PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00441.19  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.1   1.8e-22   1.3e-18       8      82 ..       1      75 [.       1      77 [. 0.97

  Alignments for each domain:
  == domain 1    score: 67.4 bits;  conditional E-value: 1.8e-22
                HHHHHHHHHH--------HHHHHHHHHHHHHH-------GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TT CS
  PF00441.19  8 metlnheRlliaaaalglarraleealeyakqrkafgkplidfqlireklaemaaeleaarllvyraaealdagk 82
                m tl+ +R+ ia++alg+a+++++ +++ya +r+afg+p+    +i++k+ em ++le+arll++raa + d+g+
  MMETSP1325-20131115|5250_1  1 MMTLDAGRIGIASQALGIAQASIDISVKYASEREAFGAPIRKLYAIQHKISEMSCKLESARLLTWRAAVLKDRGE 75
                679******************************************************************999987 PP

>> PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.1   6.1e-12   4.1e-08       1      72 [.       9      74 ..       9      77 .. 0.93

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 6.1e-12
                ---HHHH---HHHHHHHHHHHHTT-B-S----B----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----- CS
   PF08028.6  1 lgfaavalGaargalaafierarervraaggaklaedpatqlrlAeaaaeldaAralleraaerlealadrg 72
                +g+a++alG+a++ ++  +++a er    +ga++ +  a+q++++e++ +l++Ar+l  raa       drg
  MMETSP1325-20131115|5250_1  9 IGIASQALGIAQASIDISVKYASEREA--FGAPIRKLYAIQHKISEMSCKLESARLLTWRAAVL----KDRG 74
                589************************..*****************************999976....5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 339.85
//
Query:       MMETSP1325-20131115|5247_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-28   99.5   0.0    2.5e-28   99.1   0.0    1.1  1  PF05028.9 Poly (ADP-ribose) glycohydrolase (PARG)


Domain annotation for each model (and alignments):
>> PF05028.9  Poly (ADP-ribose) glycohydrolase (PARG)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.1   0.0   1.9e-32   2.5e-28     152     326 ..      51     221 ..      19     234 .. 0.85

  Alignments for each domain:
  == domain 1    score: 99.1 bits;  conditional E-value: 1.9e-32
   PF05028.9 152 lIEdqskealqvDFAnkylGGGvLssGcvQEEIrFvinPEllvsmlflekledneaiiivGaerfssytGYassfrfegeyvdkkevdkfkr..rkteivaiDAlkfkeaklkqykkesllRelnKAfigFldqskesekkkgvatgnwgCgafgGdkeLktliqllaasqakRpli 326
                 + ++q +     +FAn ++G G +   c QEE++ v +PE  v+ml + +l+d++++++ +  r s+y+GY ++f+f+   +   ++ + +   r   i+ +DA+        +y + + lR++nKA  +F  +  e      v++g+wgCg+fgG    k++ q laa  +k +l+
  MMETSP1325-20131115|5247_1  51 SADEQ-RRWAFTNFANAVFGYGEMIPSCTQEEVLQVCCPEFNVGMLHFGTLSDQQVVVVRNVRRTSDYSGYMHTFKFKPLTDPLVPLASDGAlpRVGDIITMDAVM-----RAHYDTANQLRDINKAELAFGGAAMERAGRYCVSSGRWGCGIFGGYVPHKVVQQALAAHLSKTKLY 221
                 44444.6677789****************************************************************87777777777777666999********9.....789******************77777777777**************************97776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.39s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 1517.69
//
Query:       MMETSP1325-20131115|5253_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-11   42.1   0.0      1e-10   41.5   0.0    1.3  1  PF00350.18 Dynamin family


Domain annotation for each model (and alignments):
>> PF00350.18  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   7.7e-15     1e-10      29     103 ..       2     103 .]       1     103 [] 0.85

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 7.7e-15
                 -------EEEEEEE-----.......................-------E-EE....T-----CHHHHHHHHHHH-----------SS-EEEEEEETTS-SE CS
  PF00350.18  29 gptTrrplvlqlgeeeras.......................eravkeevkee....ekkledfdevreeieketeklagankgiskkvillkilsllvkgl 103
                 g++Trrplvlql++++  s                        +   +e++e+     +k+ dfd++ eei++et++++g+nkgis k+i+lki+s+ v +l
  MMETSP1325-20131115|5253_1   2 GIVTRRPLVLQLVQQPAGSqmgadaadagvagrsgggsgggsGGGGGDEWGEFlhlpDQKFFDFDQICEEIKRETDRVTGKNKGISRKPINLKIFSPAVLNL 103
                 89**********6666655566666666666666666666667889999************************************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 474.66
//
Query:       MMETSP1325-20131115|5252_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|5251_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-12   46.4   4.8      1e-11   44.1   3.3    1.8  1  PF03092.11 BT1 family


Domain annotation for each model (and alignments):
>> PF03092.11  BT1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   3.3   7.4e-16     1e-11     251     417 ..      10     180 ..       3     192 .. 0.78

  Alignments for each domain:
  == domain 1    score: 44.1 bits;  conditional E-value: 7.4e-16
  PF03092.11 251 nfsyeflgtvkvigsiagligvtlfnrllkklsyRlvfivttvlqvlaglfdlilvkrwnlklGisDhvyilgdsvvlevlymlkfmPlvv...llsrLCPrGsEsvvfAllasianlgqivSsslGalLmeylgvtedq.....fsnlsllllveslaallplpLlflllpsar 417
                 nf  + lg+ +++g++a+ +  +l++  l +++ R+ f+v+tv ++l+ ++ l  +++    l   D  y  + s++   +   + + + v   +   +C  G+E++ +A+l si+ +g+++S  +G  L ++  v++++     +s l+ l ++++++ ll++p+++l++ s r
  MMETSP1325-20131115|5251_1  10 NFGDSDLGVLEILGNLASWMCLWLYQGRLFNVNWRRFFVVSTVGSTLMNMLLLSSLSGDTELLFYQDG-Y--VASIITAWTHATHALQFCVayrMFINMC-DGYEATCMAVLSSILLIGTSTSRDIGTQLEQVWDVSSTTldvhnYSGLQKLTVLCAVLPLLAMPFIVLMPISSR 180
                 5889999***********************************98887777655555544444433444.2..3455555555555555555332778999.8***************************9888777666667899**********************88877555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 971.86
//
Query:       MMETSP1325-20131115|5255_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0055   16.3   0.0     0.0087   15.7   0.0    1.3  1  PF00334.14 Nucleoside diphosphate kinase
  ------ inclusion threshold ------
      0.068   12.9   0.0       0.12   12.1   0.0    1.3  1  PF09266.5  Viral DNA topoisomerase I, N-terminal


Domain annotation for each model (and alignments):
>> PF00334.14  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.3e-06    0.0087       2      51 ..      77     130 ..      76     145 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.3e-06
                 -EEEEE-HHHHCTT-HHHHHHHHHH---EEEEEEEE---....HHHHHHHTGGG CS
  PF00334.14   2 rtlvliKPdavkrgligeiisrleekglkivalkmlqlt....eeqaeehYaeh 51 
                 +++v iKP+av + + + + +++ ++glk+ ++  + ++    ++++ +hY   
  MMETSP1325-20131115|5255_1  77 QAFVFIKPHAVTEPVKNLVSEQFAARGLKVLSQGSIAAEaideKKLIDQHYYAI 130
                 799***************************998777664221245666777555 PP

>> PF09266.5  Viral DNA topoisomerase I, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.7e-05      0.12      16      39 ..     119     142 ..     109     145 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.7e-05
   PF09266.5  16 kkvsednptyeilkkikiPshLtd 39 
                 +k   d   y i  k+k P+hL++
  MMETSP1325-20131115|5255_1 119 EKKLIDQHYYAIASKYKTPEHLNE 142
                 455569999*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 689.48
//
Query:       MMETSP1325-20131115|5257_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 520.06
//
Query:       MMETSP1325-20131115|5260_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   12.2   0.0       0.19   11.3   0.0    1.4  1  PF01106.12 NifU-like domain


Domain annotation for each model (and alignments):
>> PF01106.12  NifU-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.4e-05      0.19      23      53 ..      50      79 ..      45      81 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.4e-05
  PF01106.12 23 dvdgkkVkvrlqGaCsgCssstvTlkagier 53
                dv+g+++ ++l+Ga +g + s  Tl + +e+
  MMETSP1325-20131115|5260_1 50 DVTGDDIDLALMGAGEGGPDSPNTL-FTVEH 79
                799**********************.77886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|5258_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 1184.35
//
Query:       MMETSP1325-20131115|5259_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 1020.85
//
Query:       MMETSP1325-20131115|5262_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|5261_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-35  119.6   2.0    4.5e-24   84.4   0.2    2.0  2  PF12796.2  Ankyrin repeats (3 copies)
    7.6e-26   89.4   1.5    8.5e-14   51.1   0.1    2.4  2  PF13857.1  Ankyrin repeats (many copies)
    1.3e-25   87.7   2.7    9.2e-10   37.7   0.0    3.6  4  PF00023.25 Ankyrin repeat
      4e-23   81.2   0.4    1.1e-07   32.0   0.0    3.1  3  PF13637.1  Ankyrin repeats (many copies)
    6.1e-16   56.8   0.9    1.2e-05   24.9   0.0    3.5  4  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.021   14.3   0.1         17    4.8   0.0    2.9  3  PF12790.2  Type VI secretion lipoprotein
      0.024   14.0   0.3        3.7    6.8   0.0    2.0  2  PF06128.6  Shigella flexneri OspC protein


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.4   0.2   2.3e-27   4.5e-24      13      89 .]       2      83 ..       1      83 [. 0.96
   2 !   40.8   0.1   9.2e-14   1.8e-10      24      76 ..      52     103 ..      49     108 .. 0.90

  Alignments for each domain:
  == domain 1    score: 84.4 bits;  conditional E-value: 2.3e-27
   PF12796.2 13 vklLlekgadvdl.....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89
                v+lL+++gadv+l      +t+L+ A+e+g+ e+v+lL++agadvn kd++g t+L+ A+++g+ e+v+lL+++gadvnl+d
  MMETSP1325-20131115|5261_1  2 VDLLIKAGADVNLtttngASTALMMAVEKGSPECVNLLIKAGADVNLKDDNGSTALMGAAKKGSPECVDLLIKAGADVNLKD 83
                899*********988777777**********************************************************997 PP

  == domain 2    score: 40.8 bits;  conditional E-value: 9.2e-14
   PF12796.2  24 dlgetpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvk 76 
                 + g+t+L+ Aa++g+ e+v+lL++agadvn kd++gn +L +A  ++++ l++
  MMETSP1325-20131115|5261_1  52 N-GSTALMGAAKKGSPECVDLLIKAGADVNLKDDRGNAALGYASDAKCFALLH 103
                 3.899**************************************9988887765 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.1   1.1e-14   2.1e-11       1      53 [.       5      57 ..       4      57 .. 0.89
   2 !   51.1   0.1   4.4e-17   8.5e-14       1      56 []      39      93 ..      39      93 .. 0.98

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 1.1e-14
   PF13857.1  1 Llehgpadvnatdeggn.tpLhlAakggalevvrlLlapgadlnlrdsdgltal 53
                L+++g advn t ++g  t+L++A+++g++e+v lL+++gad nl+d +g tal
  MMETSP1325-20131115|5261_1  5 LIKAG-ADVNLTTTNGAsTALMMAVEKGSPECVNLLIKAGADVNLKDDNGSTAL 57
                78999.666666666666**********************************98 PP

  == domain 2    score: 51.1 bits;  conditional E-value: 4.4e-17
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                L+++g advn  d +g+t+L+ Aak+g++e+v+lL+++gad nl+d +g+ al +A
  MMETSP1325-20131115|5261_1 39 LIKAG-ADVNLKDDNGSTALMGAAKKGSPECVDLLIKAGADVNLKDDRGNAALGYA 93
                88999.***********************************************998 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00014      0.28      18      32 ..       2      16 ..       1      17 [. 0.90
   2 !   37.7   0.0   4.7e-13   9.2e-10       4      33 .]      22      51 ..      21      51 .. 0.98
   3 !   37.7   0.0   4.8e-13   9.3e-10       1      33 []      52      84 ..      52      84 .. 0.98
   4 ?   -2.0   0.0       1.7   3.4e+03      16      24 ..      97     105 ..      86     107 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00014
                HHHHHHTTSSTTHBH CS
  PF00023.25 18 vklLlsqGAdlnaqd 32
                v lL+++GAd+n+++
  MMETSP1325-20131115|5261_1  2 VDLLIKAGADVNLTT 16
                789*********987 PP

  == domain 2    score: 37.7 bits;  conditional E-value: 4.7e-13
                BHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  4 TPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                T+L++A+++g++e+v lL+++GAd+n++dd
  MMETSP1325-20131115|5261_1 22 TALMMAVEKGSPECVNLLIKAGADVNLKDD 51
                9***************************97 PP

  == domain 3    score: 37.7 bits;  conditional E-value: 4.8e-13
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                +G T+L+ Aa++g++e+v lL+++GAd+n++dd
  MMETSP1325-20131115|5261_1 52 NGSTALMGAAKKGSPECVDLLIKAGADVNLKDD 84
                79*****************************97 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 1.7
                 HHHHHHHHT CS
  PF00023.25  16 evvklLlsq 24 
                 ++  lL  +
  MMETSP1325-20131115|5261_1  97 KCFALLHTA 105
                 444444445 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   5.8e-09   1.1e-05      17      54 .]       2      40 ..       1      40 [. 0.92
   2 !   31.8   0.0   6.5e-11   1.3e-07       2      45 ..      21      64 ..      20      65 .. 0.94
   3 !   32.0   0.0   5.8e-11   1.1e-07       2      41 ..      54      93 ..      53     103 .. 0.93

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 5.8e-09
   PF13637.1 17 vklLlekgidinrtdesGn.taLhiAalrgnieilklLl 54
                v lL++ g+d+n t  +G  taL  A+++g +e+++lL+
  MMETSP1325-20131115|5261_1  2 VDLLIKAGADVNLTTTNGAsTALMMAVEKGSPECVNLLI 40
                789***********7777769*****************8 PP

  == domain 2    score: 31.8 bits;  conditional E-value: 6.5e-11
   PF13637.1  2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrg 45
                 taL++a+ +g  e+v+lL++ g+d+n +d++G taL  Aa++g
  MMETSP1325-20131115|5261_1 21 STALMMAVEKGSPECVNLLIKAGADVNLKDDNGSTALMGAAKKG 64
                599**********************************9999887 PP

  == domain 3    score: 32.0 bits;  conditional E-value: 5.8e-11
   PF13637.1  2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiA 41
                 taL+ aa++g  e+v lL++ g+d+n +d++Gn aL +A
  MMETSP1325-20131115|5261_1 54 STALMGAAKKGSPECVDLLIKAGADVNLKDDRGNAALGYA 93
                69*************************************9 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0083        16      18      29 ..       2      13 ..       1      14 [. 0.90
   2 !   24.9   0.0   6.3e-09   1.2e-05       4      29 ..      22      47 ..      18      48 .. 0.95
   3 !   23.1   0.0   2.3e-08   4.6e-05       1      29 [.      52      80 ..      52      81 .. 0.96
   4 ?   -2.5   0.0       4.3   8.5e+03       5       6 ..     101     102 ..      86     105 .. 0.53

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0083
   PF13606.1 18 veaLlengadin 29
                v++L+++gad+n
  MMETSP1325-20131115|5261_1  2 VDLLIKAGADVN 13
                789********9 PP

  == domain 2    score: 24.9 bits;  conditional E-value: 6.3e-09
   PF13606.1  4 TpLhlAasngrielveaLlengadin 29
                T+L++A+++g++e v++L+++gad+n
  MMETSP1325-20131115|5261_1 22 TALMMAVEKGSPECVNLLIKAGADVN 47
                9************************9 PP

  == domain 3    score: 23.1 bits;  conditional E-value: 2.3e-08
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                nG T+L+ Aa++g++e v++L+++gad+n
  MMETSP1325-20131115|5261_1 52 NGSTALMGAAKKGSPECVDLLIKAGADVN 80
                799*************************9 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 4.3
   PF13606.1   5 pL 6  
                 +L
  MMETSP1325-20131115|5261_1 101 LL 102
                 24 PP

>> PF12790.2  Type VI secretion lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.03        58      23      48 ..       2      28 ..       1      30 [. 0.80
   2 ?    4.8   0.0    0.0087        17      17      44 ..      30      57 ..      25      60 .. 0.83
   3 ?    3.9   0.0     0.018        34      16      39 ..      62      85 ..      56      90 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.03
   PF12790.2 23 vtltltadadlNpna.egrpspvvvrv 48
                v+l ++a+ad+N  + +g ++++++ v
  MMETSP1325-20131115|5261_1  2 VDLLIKAGADVNLTTtNGASTALMMAV 28
                7899********987477777777765 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.0087
   PF12790.2 17 ekepkevtltltadadlNpnaegrpspv 44
                +  p+ v+l ++a+ad+N  +++ ++++
  MMETSP1325-20131115|5261_1 30 KGSPECVNLLIKAGADVNLKDDNGSTAL 57
                6678899************998877765 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.018
   PF12790.2 16 aekepkevtltltadadlNpnaeg 39
                ++  p+ v+l ++a+ad+N  ++ 
  MMETSP1325-20131115|5261_1 62 KKGSPECVDLLIKAGADVNLKDDR 85
                56678899***********98654 PP

>> PF06128.6  Shigella flexneri OspC protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0019       3.7     242     279 ..      10      45 ..       2      50 .. 0.81
   2 ?    6.0   0.0    0.0033       6.5     251     279 ..      50      78 ..      45      82 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0019
   PF06128.6 242 vdvnakfekvnsGdtmldnavkyenaemiklllknGai 279
                 +dvn  +  +n   t l  av  +  e ++ll+k Ga 
  MMETSP1325-20131115|5261_1  10 ADVN--LTTTNGASTALMMAVEKGSPECVNLLIKAGAD 45 
                 5665..5678999999999*****************94 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0033
   PF06128.6 251 vnsGdtmldnavkyenaemiklllknGai 279
                  + G t l  a k +  e ++ll+k Ga 
  MMETSP1325-20131115|5261_1  50 DDNGSTALMGAAKKGSPECVDLLIKAGAD 78 
                 4679999********************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 466.43
//
Query:       MMETSP1325-20131115|5265_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.63
# Mc/sec: 540.13
//
Query:       MMETSP1325-20131115|5267_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|5268_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 190.73
//
Query:       MMETSP1325-20131115|5269_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.67
# Mc/sec: 282.56
//
Query:       MMETSP1325-20131115|5270_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 304.30
//
Query:       MMETSP1325-20131115|5273_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00081   18.2   0.0    0.00088   18.1   0.0    1.0  1  PF01425.16 Amidase


Domain annotation for each model (and alignments):
>> PF01425.16  Amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   6.5e-08   0.00088     334     377 ..      26      71 ..      10      91 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 6.5e-08
  PF01425.16 334 eeyylkaqkvrrllrrefaklfee..lDvlllPtvptpaprlgele 377
                 ++ +++  ++r  l++++ ++++e  lD+ll+P++  pap +g++ 
  MMETSP1325-20131115|5273_1  26 TNELWALNARRSALQDKVFRAMSEqrLDALLCPATVFPAPSQGAAA 71 
                 233777777777**********999****************99864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.82
# Mc/sec: 312.70
//
Query:       MMETSP1325-20131115|5271_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-05   22.3   0.4    8.5e-05   21.8   0.3    1.2  1  PF14396.1 Cystic fibrosis TM conductance regulator (CFTR), regulator domain


Domain annotation for each model (and alignments):
>> PF14396.1  Cystic fibrosis TM conductance regulator (CFTR), regulator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.3   6.2e-09   8.5e-05      46     165 ..      58     184 ..      29     196 .. 0.70

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 6.2e-09
                 XXXXXXX.........XXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXX...XX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF14396.1  46 kqsfkqt.........gefgekrksslilnplasarkfslvqkselqangieees.delserrlslvPeseqgeealprsnllntgltlqgrrr..qsvLalmtrsqsqgqeerakssasvrklsvvpqsnl 165
                  +sf++t          ++g kr+ss+ + + ++ r +sl qk + +    e++  + + +  +++v + ++g+e +  +++++t+++l+ ++   +s+ +l+ +s s++++  +      r+lsv+++ + 
  MMETSP1325-20131115|5271_1  58 TESFRDTrdtspgidmKSMGPKRRSSIDVASNDTLREVSLDQKGMDELFFQEDDAgAGMADVDVTVVEDVDLGDEEIDVADVYSTKPELSKKKSslKSMKDLFSKSFSRSNSGTK-----NRQLSVASRQSA 184
                 467777544444333235999*****99*****************77766665543899****************************9987643225666666665443333332.....455555543332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1259.26
//
Query:       MMETSP1325-20131115|5277_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.39   10.3   3.3        1.1    8.9   0.2    2.8  2  PF07595.7 Planctomycete extracellular


Domain annotation for each model (and alignments):
>> PF07595.7  Planctomycete extracellular
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.2     0.029   3.9e+02      10      14 ..      60      64 ..      53      66 .. 0.72
   2 ?    8.9   0.2     8e-05       1.1      10      22 ..      73      85 ..      68      86 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.029
   PF07595.7 10 rRRRL 14
                 RRRL
  MMETSP1325-20131115|5277_1 60 ERRRL 64
                47887 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 8e-05
   PF07595.7 10 rRRRLrlEsLEsR 22
                r+ R ++EsLE+R
  MMETSP1325-20131115|5277_1 73 RQSRSMVESLEGR 85
                66699*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 408.27
//
Query:       MMETSP1325-20131115|5281_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.3e-05   22.4   0.0    6.3e-05   22.4   0.0    1.0  1  PF13621.1 Cupin-like domain


Domain annotation for each model (and alignments):
>> PF13621.1  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   4.6e-09   6.3e-05     143     177 ..       1      35 [.       1      47 [. 0.86

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 4.6e-09
   PF13621.1 143 sslHhDhyeNlycvvsGrKrftLfppsdapklyva 177
                 ++ H D  + ly++++G K+ft+++p++   +++ 
  MMETSP1325-20131115|5281_1   1 TRAHADSEDCLYVLLRGAKHFTVLSPAHHGAVKTI 35 
                 678***********************998877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|5282_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.63
# Mc/sec: 270.07
//
Query:       MMETSP1325-20131115|5283_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 268.98
//
Query:       MMETSP1325-20131115|5275_1  [L=477]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.35s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 2005.37
//
Query:       MMETSP1325-20131115|5279_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-13   50.5   0.0      3e-13   49.8   0.0    1.3  1  PF06925.6  Monogalactosyldiacylglycerol (MGDG) synthase
    7.6e-10   38.5   0.0    1.1e-09   38.0   0.0    1.2  1  PF04101.11 Glycosyltransferase family 28 C-terminal domain
     0.0094   15.0   0.0      0.012   14.6   0.0    1.2  1  PF13528.1  Glycosyl transferase family 1
  ------ inclusion threshold ------
      0.047   13.7   0.1      0.095   12.7   0.0    1.7  2  PF13692.1  Glycosyl transferases group 1
      0.062   12.8   0.0       0.16   11.5   0.0    1.8  1  PF14341.1  PilX N-terminal


Domain annotation for each model (and alignments):
>> PF06925.6  Monogalactosyldiacylglycerol (MGDG) synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   0.0   1.1e-16     3e-13      93     169 .]       2      85 ..       1      85 [. 0.83

  Alignments for each domain:
  == domain 1    score: 49.8 bits;  conditional E-value: 1.1e-16
   PF06925.6  93 iisthplvaelplsvLk.......skellkrvlvvtvvtDfellhktWlrkeidryyvaskevkkealekGidksnikvtGiPv 169
                 +is+hplv+ ++ ++L        s      v+++tvvtD+   h++W++++ d ++v+++ ++k a ++G+ +s+ik++G+Pv
  MMETSP1325-20131115|5279_1   2 VISVHPLVQDVTARLLDcpttdpqSSAHGLAVPFATVVTDLGSAHPMWFHQKCDTCFVPTEVLRKVASAQGLADSQIKTVGLPV 85 
                 89*******998887742222221122223699**************************************************9 PP

>> PF04101.11  Glycosyltransferase family 28 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0   4.1e-13   1.1e-09       2      96 ..     122     227 ..     121     244 .. 0.76

  Alignments for each domain:
  == domain 1    score: 38.0 bits;  conditional E-value: 4.1e-13
                 EEEE---SSHHHHHCCCTSHHHHHHHC........HHHHCHHHC----EC---STT..-----.....EEEE-EESSSSHHHHHHHH-EEEEE-----HHHHHHTT--EE CS
  PF04101.11   2 ifVtgGSqgaealnqlvleilkllelk........sreeqvlhqtGksnyeevkik..veklg.....lkvevfsysdkmaeiikaadlvIsrAGagtiaellalgkplI 96 
                 ++V+gG  g       +++i+k l+lk        +   q ++ +Gk++ +  + +    +l+     l+++ + ++++m+e ++aad+ ++ AG+gtiae++ +g+p+ 
  MMETSP1325-20131115|5279_1 122 VLVVGGGDGVGG----IEGIAKALALKlnrdgmnsGAMRQMVVVCGKNEGARRNLEalAGELEgggagLTMTCTGFVTNMDEWMSAADVLVTKAGPGTIAEAAIKGLPVM 227
                 566666555553....3333333333333446666667899999999988888888763333367799***************************************986 PP

>> PF13528.1  Glycosyl transferase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   4.5e-06     0.012     242     313 ..     195     265 ..     135     269 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 4.5e-06
   PF13528.1 242 egflqdLaeckavianaGfellsEalylgkpvllvpldgqfEQtsnAaaleelglgevldmedldpaklarf 313
                 +++ + ++ ++ ++++aG+ ++ Ea+  g+pv+l  +    ++  n+ +++e g+g+ +   +  +a++ ++
  MMETSP1325-20131115|5279_1 195 TNMDEWMSAADVLVTKAGPGTIAEAAIKGLPVMLSTF-LPGQEAGNVDFVKESGFGDYSPDPEVIAARVSEW 265
                 567788999************************9999.4457788***********9976555666666665 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.5e-05     0.095      38     104 ..     160     234 ..     123     268 .. 0.69
   2 ?   -4.0   0.0       4.9   1.3e+04      91     103 ..     279     291 ..     278     296 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.5e-05
   PF13692.1  38 viiGk..gpde.larl........lepnveflgfveelaellasadvglaplrfgeglplKlleylaaGlPvvasdi..g 104
                 v++Gk  g+++ l++l        ++   + +gfv  + e++++adv++   +  +g p+ + e++  GlPv  s +  g
  MMETSP1325-20131115|5279_1 160 VVCGKneGARRnLEALagelegggAGLTMTCTGFVTNMDEWMSAADVLVT--K--AG-PGTIAEAAIKGLPVMLSTFlpG 234
                 55666553332344444335553333356679*****************7..4..33.799***********99888443 PP

  == domain 2    score: -4.0 bits;  conditional E-value: 4.9
   PF13692.1  91 ylaaGlPvvasdi 103
                 +la G+P  + d+
  MMETSP1325-20131115|5279_1 279 ALASGRPAATLDV 291
                 6899999988876 PP

>> PF14341.1  PilX N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     6e-05      0.16      21      50 ..     188     221 ..     185     222 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 6e-05
   PF14341.1  21 atiqg..ssleermsandrdriqa..fyaAEagl 50 
                  t++g  + ++e+msa+d +++ a   + AEa++
  MMETSP1325-20131115|5279_1 188 MTCTGfvTNMDEWMSAADVLVTKAgpGTIAEAAI 221
                 6899999*************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 1433.21
//
Query:       MMETSP1325-20131115|5285_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 674.89
//
Query:       MMETSP1325-20131115|5280_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.53
# Mc/sec: 1351.91
//
Query:       MMETSP1325-20131115|5284_1  [L=373]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.56
# Mc/sec: 1596.14
//
Query:       MMETSP1325-20131115|5287_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.004   16.8   1.0         34    4.9   0.0    5.8  7  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.014   14.9   4.4       0.16   11.4   0.0    4.1  4  PF12799.2  Leucine Rich repeats (2 copies)
      0.033   14.2   0.1         11    6.1   0.0    3.3  4  PF09267.5  Dictyostelium STAT, coiled coil


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.0    0.0074        34       2      20 ..      22      41 ..      21      43 .. 0.86
   2 ?   -1.0   0.0      0.61   2.8e+03       7      17 ..      52      63 ..      48      68 .. 0.75
   3 ?    1.0   0.0      0.14   6.3e+02       7      22 .]      77      93 ..      73      93 .. 0.79
   4 ?    1.0   0.0      0.13     6e+02       6      21 ..     101     117 ..      99     118 .. 0.81
   5 ?    0.3   0.0      0.23     1e+03       5      16 ..     125     139 ..     124     145 .. 0.73
   6 ?   -1.6   0.0      0.95   4.3e+03       7      20 ..     213     227 ..     209     229 .. 0.73
   7 ?   -0.3   0.0      0.37   1.7e+03       6      22 .]     237     254 ..     234     254 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0074
                ESEEEETSSBCB.CHHHHHH CS
  PF00560.28  2 LeeLdLsgNnlt.slppsls 20
                L+eL L  N+l+  +p  ++
  MMETSP1325-20131115|5287_1 22 LTELVLEENSLSgPIPTQIG 41
                99**********99998665 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.61
                ETSSBCB.CHHH CS
  PF00560.28  7 LsgNnlt.slpp 17
                L+ N+l+ slp 
  MMETSP1325-20131115|5287_1 52 LDANSLSsSLPT 63
                778999977987 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.14
                ETSSBCB.CHHHHHHHH CS
  PF00560.28  7 LsgNnlt.slppslsnL 22
                +  N+l+ slp++l++L
  MMETSP1325-20131115|5287_1 77 MHMNSLSaSLPSELGAL 93
                56699**99**998876 PP

  == domain 4    score: 1.0 bits;  conditional E-value: 0.13
                 EETSSBCB.CHHHHHHH CS
  PF00560.28   6 dLsgNnlt.slppslsn 21 
                  L++N++t ++p+ +++
  MMETSP1325-20131115|5287_1 101 RLDSNSFTaEVPSQIGA 117
                 6999****999997665 PP

  == domain 5    score: 0.3 bits;  conditional E-value: 0.23
                 EEETSSBCBC...HH CS
  PF00560.28   5 LdLsgNnlts...lp 16 
                  +L++N+l+    +p
  MMETSP1325-20131115|5287_1 125 FYLNSNQLCGwnaIP 139
                 689****99435555 PP

  == domain 6    score: -1.6 bits;  conditional E-value: 0.95
                 ETSSBCB.CHHHHHH CS
  PF00560.28   7 LsgNnlt.slppsls 20 
                 L +N+lt  +p  l+
  MMETSP1325-20131115|5287_1 213 LFSNKLTgPVPTQLG 227
                 778999988887665 PP

  == domain 7    score: -0.3 bits;  conditional E-value: 0.37
                 EETSSBCB.CHHHHHHHH CS
  PF00560.28   6 dLsgNnlt.slppslsnL 22 
                 ++ +N++t  lp +l++L
  MMETSP1325-20131115|5287_1 237 NFFSNSFTgPLPTELGQL 254
                 667899998899988765 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.6e-05      0.16       1      27 [.      20      47 ..      11      48 .. 0.63
   2 ?   -2.6   0.0      0.87     4e+03      10      26 ..      54      71 ..      49      73 .. 0.63
   3 ?    2.1   0.2     0.031   1.4e+02       8      38 ..     102     134 ..      78     140 .. 0.64
   4 ?   -3.1   0.0       1.3     6e+03      10      23 ..     215     229 ..     213     233 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.6e-05
   PF12799.2  1 tnLevLdLsnNnIkd.lppelanLpnLk 27
                t L++L L +N+++  +p +++ L+ Lk
  MMETSP1325-20131115|5287_1 20 TELTELVLEENSLSGpIPTQIGALTALK 47
                4566667777777644666666666666 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.87
   PF12799.2 10 nNnIk.dlppelanLpnL 26
                 N+++ +lp e++ L +L
  MMETSP1325-20131115|5287_1 54 ANSLSsSLPTEVGLLVDL 71
                588874577766655555 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.031
   PF12799.2   8 LsnNnIk.dlppelanLpnLk.tLnLsnNpisd 38 
                 L +N+ + ++p +++ L+ L+   +L++N+++ 
  MMETSP1325-20131115|5287_1 102 LDSNSFTaEVPSQIGALSALTaKFYLNSNQLCG 134
                 455555555666555555554234566666655 PP

  == domain 4    score: -3.1 bits;  conditional E-value: 1.3
   PF12799.2  10 nNnIkd.lppelanL 23 
                 +N+++  +p +l++L
  MMETSP1325-20131115|5287_1 215 SNKLTGpVPTQLGQL 229
                 577775466667776 PP

>> PF09267.5  Dictyostelium STAT, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0025        11      44      80 ..      22      58 ..      14      75 .. 0.87
   2 ?    1.5   0.0     0.065   2.9e+02      51      77 ..      79     105 ..      71     109 .. 0.84
   3 ?    2.5   0.0     0.031   1.4e+02      53      85 ..     106     138 ..     100     144 .. 0.81
   4 ?   -2.3   0.0      0.99   4.5e+03      54      71 ..     218     235 ..     211     244 .. 0.61

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0025
                HHHHHHHHHHH---HHHHHHHHHHHH------HHHHH CS
   PF09267.5 44 lksLdseqitLkkqleaelsaLdqlkktliLePtela 80
                l  L  e + L++ + + + aL +lk++++L+ + l 
  MMETSP1325-20131115|5287_1 22 LTELVLEENSLSGPIPTQIGALTALKESVLLDANSLS 58
                556777899**********************999886 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.065
                 HHHH---HHHHHHHHHHHH------HH CS
   PF09267.5  51 qitLkkqleaelsaLdqlkktliLePt 77 
                  + L+  l +el aL  +k+ + L+ +
  MMETSP1325-20131115|5287_1  79 MNSLSASLPSELGALTGIKSWFRLDSN 105
                 57899*************998888766 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.031
                 HH---HHHHHHHHHHHH------HHHHHHHHHH CS
   PF09267.5  53 tLkkqleaelsaLdqlkktliLePtelakliiL 85 
                     ++ + + aL +l  ++ L+ ++l+   ++
  MMETSP1325-20131115|5287_1 106 SFTAEVPSQIGALSALTAKFYLNSNQLCGWNAI 138
                 5667788999*****************976665 PP

  == domain 4    score: -2.3 bits;  conditional E-value: 0.99
                 H---HHHHHHHHHHHH-- CS
   PF09267.5  54 LkkqleaelsaLdqlkkt 71 
                 L + + + l  Ldq+ + 
  MMETSP1325-20131115|5287_1 218 LTGPVPTQLGQLDQMTRA 235
                 555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 1231.73
//
Query:       MMETSP1325-20131115|5286_1  [L=452]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.33s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 2082.99
//
Query:       MMETSP1325-20131115|5291_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   11.0   0.0       0.14   11.0   0.0    1.0  1  PF07537.6  CamS sex pheromone cAM373 precursor
       0.16   11.5   3.1       0.15   11.6   2.2    1.1  1  PF11921.3  Domain of unknown function (DUF3439)
       0.78    7.3   4.6       0.73    7.4   3.2    1.0  1  PF05086.7  Dictyostelium (Slime Mold) REP protein
        1.2    8.7   8.9        1.2    8.8   6.1    1.1  1  PF01456.12 Mucin-like glycoprotein
        3.2    5.4   7.1        2.7    5.7   5.0    1.0  1  PF06933.6  Special lobe-specific silk protein SSP160


Domain annotation for each model (and alignments):
>> PF07537.6  CamS sex pheromone cAM373 precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.2e-05      0.14     132     171 ..       6      45 ..       1      50 [. 0.90

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.2e-05
                 ..-TTS-HHHHHH---HHHHHHHHHHHH-TT-----EEEE CS
   PF07537.6 132 tyekdisdeellaqgkkvaqevlkrlrkkdelkdvPitiA 171
                 t +++i++++ +   + va+e  ++ +k+++lkdvP + A
  MMETSP1325-20131115|5291_1   6 TTQTSINTTTNTTTTTSVADETPRTFKKNSNLKDVPAHWA 45 
                 55899*******************************9987 PP

>> PF11921.3  Domain of unknown function (DUF3439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.2   5.5e-05      0.15      41      90 ..       3      53 ..       1      56 [] 0.50

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5.5e-05
   PF11921.3 41 rsiicpttttttttttttmpttttlptt.tkmsmvkvplvppeafgrvmna 90
                 s+   t+  ttt tttt   +   p t  k s +k       a+ ++  a
  MMETSP1325-20131115|5291_1  3 ASLTTQTSINTTTNTTTTTSVADETPRTfKKNSNLKDVPAHWAALNKLWAA 53
                566666666566555555555555555415556555333334455555555 PP

>> PF05086.7  Dictyostelium (Slime Mold) REP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   3.2   0.00027      0.73     248     280 ..       6      38 ..       1      50 [. 0.78

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00027
   PF05086.7 248 qpskeknkttttttttttttsqartrkrkaidd 280
                   +++ n+tt+ttttt++ ++++rt k+++  +
  MMETSP1325-20131115|5291_1   6 TTQTSINTTTNTTTTTSVADETPRTFKKNSNLK 38 
                 567788999999999999999999999986544 PP

>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.1   0.00043       1.2      70      94 ..       6      30 ..       1      47 [. 0.60

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00043
  PF01456.12 70 tkttkattttttttttttateaPsd 94
                t+ t   ttt+ttttt  a e P +
  MMETSP1325-20131115|5291_1  6 TTQTSINTTTNTTTTTSVADETPRT 30
                4444555556666666666666653 PP

>> PF06933.6  Special lobe-specific silk protein SSP160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.0   0.00097       2.7     677     702 ..       6      31 ..       1      54 [. 0.55

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.00097
   PF06933.6 677 attttssttttttttttaaptttttk 702
                 +t t+  ttt ttttt+ a  t  t 
  MMETSP1325-20131115|5291_1   6 TTQTSINTTTNTTTTTSVADETPRTF 31 
                 33333334444444444444443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       526  (0.0384728); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.44s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|5292_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|5290_1  [L=662]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-45  151.6  46.6    5.8e-07   28.8   0.7   11.1 14  PF12799.2  Leucine Rich repeats (2 copies)
    3.4e-42  141.9  47.9    4.2e-12   45.5   1.8    9.5 11  PF13855.1  Leucine rich repeat
    8.1e-28   92.0  54.9     0.0099   15.6   0.1   18.3 19  PF00560.28 Leucine Rich Repeat
    2.7e-15   53.6  62.5       0.71   10.2   0.1   18.8 20  PF13504.1  Leucine rich repeat
    3.9e-10   38.6  44.2        2.1    8.5   0.1   16.2 18  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
        1.6    7.4   9.0        2.3    6.8   6.2    1.1  1  PF04684.8  BAF1 / ABF1 chromatin reorganising factor
        9.9    6.0  10.0         18    5.2   0.2    4.7  5  PF07725.7  Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   2.5   2.2e-06    0.0044       3      40 ..      29      66 ..      29      69 .. 0.97
   2 !   28.8   0.7     3e-10   5.8e-07       2      40 ..      51      89 ..      50      92 .. 0.95
   3 !   25.8   0.5   2.6e-09   5.1e-06       2      42 ..      74     114 ..      73     116 .. 0.94
   4 !    9.7   0.4    0.0003      0.59       5      39 ..     100     131 ..      96     132 .. 0.81
   5 !   16.7   0.6   1.8e-06    0.0036       5      37 ..     120     153 ..     116     160 .. 0.89
   6 !   24.4   1.7   7.5e-09   1.5e-05       5      43 ..     144     181 ..     141     185 .. 0.86
   7 !   26.7   0.2   1.4e-09   2.8e-06       2      43 ..     163     203 ..     162     205 .. 0.96
   8 !   11.3   0.6   9.4e-05      0.18       3      37 ..     186     219 ..     184     252 .. 0.90
   9 !   15.3   0.0   5.1e-06    0.0099       5      41 ..     236     275 ..     232     275 .. 0.89
  10 !   28.6   0.0   3.6e-10   7.1e-07       1      39 [.     258     296 ..     258     302 .. 0.94
  11 !   25.4   0.0   3.5e-09   6.8e-06       2      40 ..     376     414 ..     375     418 .. 0.94
  12 !   12.8   0.0   3.1e-05     0.061       2      36 ..     454     489 ..     453     495 .. 0.91
  13 !   17.8   1.3   8.8e-07    0.0017       3      36 ..     506     543 ..     504     550 .. 0.84
  14 !    7.2   1.7    0.0017       3.4       3      35 ..     533     565 ..     532     571 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 2.2e-06
   PF12799.2  3 LevLdLsnNnIkdlppelanLpnLktLnLsnNpisdls 40
                L++LdLs N ++ lp+ l  Lp L+ L   ++++s+l+
  MMETSP1325-20131115|5290_1 29 LRTLDLSLNDLSTLPAGLNELPALQKLLARSCRLSNLP 66
                99*********************************996 PP

  == domain 2    score: 28.8 bits;  conditional E-value: 3e-10
   PF12799.2  2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdls 40
                 L++L  +++++++lp++l +L  L +L+Ls+N++s ++
  MMETSP1325-20131115|5290_1 51 ALQKLLARSCRLSNLPHSLFGLEHLVVLDLSHNNLSQIP 89
                69**********************************986 PP

  == domain 3    score: 25.8 bits;  conditional E-value: 2.6e-09
   PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaL 42 
                  L vLdLs+Nn++++p    +L  L  L+Ls+N++  l++L
  MMETSP1325-20131115|5290_1  74 HLVVLDLSHNNLSQIPDGMWRLVALADLDLSHNQLAQLPEL 114
                 689**************9******************99988 PP

  == domain 4    score: 9.7 bits;  conditional E-value: 0.0003
   PF12799.2   5 vLdLsnNnIkdlppelanLpnLktLnLsnNpisdl 39 
                  LdLs+N++ +lp+ l+  ++   L Ls N++++l
  MMETSP1325-20131115|5290_1 100 DLDLSHNQLAQLPE-LG--SSVVRLCLSENRLTSL 131
                 599**********9.99..6688888888888876 PP

  == domain 5    score: 16.7 bits;  conditional E-value: 1.8e-06
   PF12799.2   5 vLdLsnNnIkdlppe.lanLpnLktLnLsnNpis 37 
                  L Ls+N++++lp + l ++ +L +L++s+N + 
  MMETSP1325-20131115|5290_1 120 RLCLSENRLTSLPSQcLQRMGKLSLLDISHNSLA 153
                 588***********879**************986 PP

  == domain 6    score: 24.4 bits;  conditional E-value: 7.5e-09
   PF12799.2   5 vLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43 
                  Ld+s+N++  lp+ +++L +L+tL+ ++N+++ l+ L+
  MMETSP1325-20131115|5290_1 144 LLDISHNSLAVLPE-IGGLLSLQTLHAQHNQLQTLPDLS 181
                 59************.*****************9665553 PP

  == domain 7    score: 26.7 bits;  conditional E-value: 1.4e-09
   PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43 
                 +L++L  ++N+++ lp  l+ L++L +++L  N++ ++++L+
  MMETSP1325-20131115|5290_1 163 SLQTLHAQHNQLQTLPD-LSPLRSLAVIDLRENRLASVPSLP 203
                 69***************.*******************99985 PP

  == domain 8    score: 11.3 bits;  conditional E-value: 9.4e-05
   PF12799.2   3 LevLdLsnNnIkdlppelanLpnLktLnLsnNpis 37 
                 L v+dL++N++ ++p  l   p L    Ls N+++
  MMETSP1325-20131115|5290_1 186 LAVIDLRENRLASVPS-LPASPHLAKVLLSFNQLT 219
                 7789************.999999999999999997 PP

  == domain 9    score: 15.3 bits;  conditional E-value: 5.1e-06
   PF12799.2   5 vLdLsnNnIk..dlppe.lanLpnLktLnLsnNpisdlsa 41 
                 ++ LsnN ++  +l+++ l+ Lp L tL++s + + dl+a
  MMETSP1325-20131115|5290_1 236 EVHLSNNHLTlgSLEGSlLGALPTLHTLDVSQCDVADLPA 275
                 678*****9999****8579**************999985 PP

  == domain 10    score: 28.6 bits;  conditional E-value: 3.6e-10
   PF12799.2   1 tnLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdl 39 
                 + L++Ld s++ + dlp++l+ Lp+L+ L +++Npi  +
  MMETSP1325-20131115|5290_1 258 PTLHTLDVSQCDVADLPADLGYLPKLQRLIVNGNPIKRI 296
                 689*********************************876 PP

  == domain 11    score: 25.4 bits;  conditional E-value: 3.5e-09
   PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdls 40 
                 nL +Ld +++ +  lp+e++ +++L++Ln+snN +  l+
  MMETSP1325-20131115|5290_1 376 NLVSLDMAGCGLRALPGEIGACRQLQSLNVSNNLLATLP 414
                 9********************************998876 PP

  == domain 12    score: 12.8 bits;  conditional E-value: 3.1e-05
   PF12799.2   2 nLevLdLsnNnIkdlppelanLpn.LktLnLsnNpi 36 
                 +L+ LdL++N++  +p+ +  L++ L +L L +N i
  MMETSP1325-20131115|5290_1 454 SLKDLDLRRNSLDAVPAFVFELSSaLHSLALGGNAI 489
                 69***************889**966********988 PP

  == domain 13    score: 17.8 bits;  conditional E-value: 8.8e-07
   PF12799.2   3 LevLdLsnNnIkdlppela.....nLpnLktLnLsnNpi 36 
                 L ++dLsn++I+dl+  l       L+ L++L+LsnN +
  MMETSP1325-20131115|5290_1 506 LGFIDLSNCRIEDLGS-LPicaaqHLNLLRSLDLSNNDL 543
                 6689***********9.55555668************87 PP

  == domain 14    score: 7.2 bits;  conditional E-value: 0.0017
   PF12799.2   3 LevLdLsnNnIkdlppelanLpnLktLnLsnNp 35 
                 L++LdLsnN +  +p+el+    L +L Ls+Np
  MMETSP1325-20131115|5290_1 533 LRSLDLSNNDLRLIPAELGLVGTLNSLQLSGNP 565
                 89**********999998766677777777776 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.7   6.4e-06     0.013      27      61 .]      29      62 ..      21      62 .. 0.92
   2 !   45.5   1.8   2.1e-15   4.2e-12       1      61 []      50     108 ..      50     108 .. 0.93
   3 !   32.7   2.3   2.1e-11   4.1e-08       4      61 .]     119     174 ..     116     174 .. 0.93
   4 !   15.6   1.0   4.7e-06    0.0091       2      61 .]     163     218 ..     163     218 .. 0.93
   5 !    8.6   0.7   0.00069       1.3       2      49 ..     185     228 ..     184     244 .. 0.73
   6 !    7.7   1.4    0.0013       2.5       1      59 [.     206     268 ..     206     269 .. 0.74
   7 !   17.3   0.1   1.3e-06    0.0025       3      61 .]     234     293 ..     232     293 .. 0.92
   8 !   16.0   0.0   3.4e-06    0.0066       1      49 [.     258     305 ..     258     306 .. 0.92
   9 !   14.5   0.1     1e-05      0.02       2      61 .]     376     432 ..     375     432 .. 0.80
  10 !   22.8   0.0   2.5e-08   4.9e-05       2      61 .]     454     516 ..     453     516 .. 0.86
  11 !   18.9   2.8   4.4e-07   0.00086       3      59 ..     506     564 ..     504     566 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.4e-06
   PF13855.1 27 LkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                L++LdLs n l+++++  ++ Lp+L++L  +++rl
  MMETSP1325-20131115|5290_1 29 LRTLDLSLNDLSTLPA-GLNELPALQKLLARSCRL 62
                99************98.55************9997 PP

  == domain 2    score: 45.5 bits;  conditional E-value: 2.1e-15
   PF13855.1   1 pnLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 p L++L  +++rl+++p+ ++ gl++L vLdLs+nnl+ i++++ + L++L  L+Ls+N+l
  MMETSP1325-20131115|5290_1  50 PALQKLLARSCRLSNLPH-SLFGLEHLVVLDLSHNNLSQIPDGM-WRLVALADLDLSHNQL 108
                 6799*************7.6666*****************9977.**************97 PP

  == domain 3    score: 32.7 bits;  conditional E-value: 2.1e-11
   PF13855.1   4 keLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                  +L Ls Nrl+++p  +++++ +L  Ld+s+n+l ++++  + gL sL+ L  ++N+l
  MMETSP1325-20131115|5290_1 119 VRLCLSENRLTSLPSQCLQRMGKLSLLDISHNSLAVLPE--IGGLLSLQTLHAQHNQL 174
                 578899*******************************99..56*************97 PP

  == domain 4    score: 15.6 bits;  conditional E-value: 4.7e-06
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 +L++L+ ++N l+++pd  ++ l +L v+dL +n+l s+++  +   p+L ++ Ls N+l
  MMETSP1325-20131115|5290_1 163 SLQTLHAQHNQLQTLPD--LSPLRSLAVIDLRENRLASVPS--LPASPHLAKVLLSFNQL 218
                 69**************9..9999****************96..78889999999999987 PP

  == domain 5    score: 8.6 bits;  conditional E-value: 0.00069
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLp 49 
                 +L ++dL+ Nrl ++p  ++   ++L +  Ls n l++++  +f++ +
  MMETSP1325-20131115|5290_1 185 SLAVIDLRENRLASVP--SLPASPHLAKVLLSFNQLTVLP--CFHDER 228
                 789999*********9..899999999999**99999985..554443 PP

  == domain 6    score: 7.7 bits;  conditional E-value: 0.0013
   PF13855.1   1 pnLkeLdLsnNrlkvipdgaFkgl....snLkvLdLsgnnlk..sispeafkgLpsLreLnLsgN 59 
                 p+L ++ Ls+N l+v+p  +F++     + L +  Ls+n l+  s++  ++  Lp L  L++s++
  MMETSP1325-20131115|5290_1 206 PHLAKVLLSFNQLTVLP--CFHDErllgTVLAEVHLSNNHLTlgSLEGSLLGALPTLHTLDVSQC 268
                 68888888888888888..7776655778888888888888655777777888888888887765 PP

  == domain 7    score: 17.3 bits;  conditional E-value: 1.3e-06
   PF13855.1   3 LkeLdLsnNrlk..vipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 L e++LsnN+l+  +++ + ++ l+ L++Ld s +    +++  +  Lp+L+ L + gN++
  MMETSP1325-20131115|5290_1 234 LAEVHLSNNHLTlgSLEGSLLGALPTLHTLDVSQCDVADLPA-DLGYLPKLQRLIVNGNPI 293
                 7899*****88777**************************98.56**************87 PP

  == domain 8    score: 16.0 bits;  conditional E-value: 3.4e-06
   PF13855.1   1 pnLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLp 49 
                 p L +Ld+s+++  ++p + +++l++L+ L  +gn +k+i +++++g +
  MMETSP1325-20131115|5290_1 258 PTLHTLDVSQCDVADLPAD-LGYLPKLQRLIVNGNPIKRIRRGLLEGPV 305
                 689*************976.599*********************99976 PP

  == domain 9    score: 14.5 bits;  conditional E-value: 1e-05
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 nL +Ld  ++ l+ +p ++ + +  L++L+ s+n l ++++ a+ g+  L+ L   +N+l
  MMETSP1325-20131115|5290_1 376 NLVSLDMAGCGLRALPGEI-GACRQLQSLNVSNNLLATLPA-ALLGC-PLTTLQAGSNQL 432
                 7999***********9877.66**********777788877.66777.477777777765 PP

  == domain 10    score: 22.8 bits;  conditional E-value: 2.5e-08
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispea...fkgLpsLreLnLsgNrl 61 
                 +Lk+LdL++N+l  +p  +F+  s L++L L+gn++  + + a     +L  L  ++Ls++r+
  MMETSP1325-20131115|5290_1 454 SLKDLDLRRNSLDAVPAFVFELSSALHSLALGGNAIRQVGRAAherWGSLSGLGFIDLSNCRI 516
                 7********************99*************988554444447788889999999887 PP

  == domain 11    score: 18.9 bits;  conditional E-value: 4.4e-07
   PF13855.1   3 LkeLdLsnNrlkvi...pdgaFkglsnLkvLdLsgnnlksispea.fkgLpsLreLnLsgN 59 
                 L  +dLsn+r++++   p  a ++l+ L++LdLs+n l  i++e+ + g+  L +L LsgN
  MMETSP1325-20131115|5290_1 506 LGFIDLSNCRIEDLgslPICAAQHLNLLRSLDLSNNDLRLIPAELgLVGT--LNSLQLSGN 564
                 66799******9998878899*************9999*****9658887..999999999 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.3    0.0015         3       2      19 ..      29      46 ..      28      49 .. 0.88
   2 !    6.5   0.1    0.0049       9.5       2      19 ..      52      70 ..      51      72 .. 0.87
   3 !   15.6   0.1   5.1e-06    0.0099       1      18 [.      74      91 ..      74      95 .. 0.88
   4 !    7.9   0.0    0.0018       3.5       4      20 ..     100     115 ..      97     117 .. 0.84
   5 !    7.9   0.2    0.0017       3.3       3      20 ..     119     137 ..     117     139 .. 0.84
   6 !    7.4   0.1    0.0025       4.9       1      22 []     141     161 ..     141     161 .. 0.87
   7 !    8.2   0.1    0.0014       2.7       1      20 [.     163     181 ..     163     183 .. 0.90
   8 ?    4.2   0.0     0.029        56       1      17 [.     185     201 ..     185     205 .. 0.85
   9 ?    4.2   0.0     0.028        56       4      19 ..     210     224 ..     207     226 .. 0.82
  10 ?    2.3   0.1      0.12   2.3e+02       4      14 ..     236     246 ..     234     257 .. 0.71
  11 ?    4.2   0.0     0.027        54       2      20 ..     260     278 ..     259     280 .. 0.87
  12 ?    3.9   0.0     0.035        69       1      18 [.     282     299 ..     282     304 .. 0.84
  13 !    6.0   0.0    0.0073        14       1      21 [.     376     396 ..     376     397 .. 0.88
  14 !    8.4   0.2    0.0012       2.4       1      19 [.     399     417 ..     399     421 .. 0.86
  15 !    6.1   0.0    0.0066        13       1      17 [.     454     470 ..     454     476 .. 0.85
  16 ?   -3.6   0.0         7   1.4e+04       2      12 ..     479     489 ..     478     492 .. 0.79
  17 !    6.0   0.0    0.0073        14       5      17 ..     509     521 ..     506     527 .. 0.82
  18 !    9.9   0.5   0.00037      0.72       2      19 ..     533     550 ..     532     552 .. 0.89
  19 ?   -0.5   0.0         1     2e+03       2      10 ..     556     564 ..     555     566 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0015
                ESEEEETSSBCBCHHHHH CS
  PF00560.28  2 LeeLdLsgNnltslppsl 19
                L++LdLs N l++lp +l
  MMETSP1325-20131115|5290_1 29 LRTLDLSLNDLSTLPAGL 46
                9**************976 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0049
                ESEEEETSSBCBCHHHH.H CS
  PF00560.28  2 LeeLdLsgNnltslpps.l 19
                L++L  ++++l++lp+s +
  MMETSP1325-20131115|5290_1 52 LQKLLARSCRLSNLPHSlF 70
                89999***********955 PP

  == domain 3    score: 15.6 bits;  conditional E-value: 5.1e-06
                TESEEEETSSBCBCHHHH CS
  PF00560.28  1 nLeeLdLsgNnltslpps 18
                +L +LdLs+Nnl+++p++
  MMETSP1325-20131115|5290_1 74 HLVVLDLSHNNLSQIPDG 91
                699*************97 PP

  == domain 4    score: 7.9 bits;  conditional E-value: 0.0018
                 EEEETSSBCBCHHHHHH CS
  PF00560.28   4 eLdLsgNnltslppsls 20 
                  LdLs+N+l +lp+ l+
  MMETSP1325-20131115|5290_1 100 DLDLSHNQLAQLPE-LG 115
                 69**********99.65 PP

  == domain 5    score: 7.9 bits;  conditional E-value: 0.0017
                 SEEEETSSBCBCHHHH.HH CS
  PF00560.28   3 eeLdLsgNnltslpps.ls 20 
                  +L Ls N+ltslp+  l+
  MMETSP1325-20131115|5290_1 119 VRLCLSENRLTSLPSQcLQ 137
                 6899**********98776 PP

  == domain 6    score: 7.4 bits;  conditional E-value: 0.0025
                 TESEEEETSSBCBCHHHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslppslsnL 22 
                 +L  Ld+s+N+l  lp+ +++L
  MMETSP1325-20131115|5290_1 141 KLSLLDISHNSLAVLPE-IGGL 161
                 5888************9.8776 PP

  == domain 7    score: 8.2 bits;  conditional E-value: 0.0014
                 TESEEEETSSBCBCHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslppsls 20 
                 +L++L+ ++N+l++lp+ ls
  MMETSP1325-20131115|5290_1 163 SLQTLHAQHNQLQTLPD-LS 181
                 79**************9.76 PP

  == domain 8    score: 4.2 bits;  conditional E-value: 0.029
                 TESEEEETSSBCBCHHH CS
  PF00560.28   1 nLeeLdLsgNnltslpp 17 
                 +L ++dL+ N+l s+p+
  MMETSP1325-20131115|5290_1 185 SLAVIDLRENRLASVPS 201
                 5889*********9887 PP

  == domain 9    score: 4.2 bits;  conditional E-value: 0.028
                 EEEETSSBCBCHHHHH CS
  PF00560.28   4 eLdLsgNnltslppsl 19 
                 +  Ls+N+lt lp+ +
  MMETSP1325-20131115|5290_1 210 KVLLSFNQLTVLPC-F 224
                 6679*********9.6 PP

  == domain 10    score: 2.3 bits;  conditional E-value: 0.12
                 EEEETSSBCBC CS
  PF00560.28   4 eLdLsgNnlts 14 
                 e +Ls+N+lt 
  MMETSP1325-20131115|5290_1 236 EVHLSNNHLTL 246
                 789*****984 PP

  == domain 11    score: 4.2 bits;  conditional E-value: 0.027
                 ESEEEETSSBCBCHHHHHH CS
  PF00560.28   2 LeeLdLsgNnltslppsls 20 
                 L +Ld+s + + +lp +l+
  MMETSP1325-20131115|5290_1 260 LHTLDVSQCDVADLPADLG 278
                 89*************9876 PP

  == domain 12    score: 3.9 bits;  conditional E-value: 0.035
                 TESEEEETSSBCBCHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslpps 18 
                 +L++L ++gN+++ +  +
  MMETSP1325-20131115|5290_1 282 KLQRLIVNGNPIKRIRRG 299
                 69**********998776 PP

  == domain 13    score: 6.0 bits;  conditional E-value: 0.0073
                 TESEEEETSSBCBCHHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslppslsn 21 
                 nL +Ld+ g+ l  lp ++++
  MMETSP1325-20131115|5290_1 376 NLVSLDMAGCGLRALPGEIGA 396
                 899**********99987765 PP

  == domain 14    score: 8.4 bits;  conditional E-value: 0.0012
                 TESEEEETSSBCBCHHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslppsl 19 
                 +L++L++s+N l +lp  l
  MMETSP1325-20131115|5290_1 399 QLQSLNVSNNLLATLPAAL 417
                 69*************9874 PP

  == domain 15    score: 6.1 bits;  conditional E-value: 0.0066
                 TESEEEETSSBCBCHHH CS
  PF00560.28   1 nLeeLdLsgNnltslpp 17 
                 +L+ LdL++N+l  +p 
  MMETSP1325-20131115|5290_1 454 SLKDLDLRRNSLDAVPA 470
                 6999********98887 PP

  == domain 16    score: -3.6 bits;  conditional E-value: 7
                 ESEEEETSSBC CS
  PF00560.28   2 LeeLdLsgNnl 12 
                 L +L L gN +
  MMETSP1325-20131115|5290_1 479 LHSLALGGNAI 489
                 78899999976 PP

  == domain 17    score: 6.0 bits;  conditional E-value: 0.0073
                 EEETSSBCBCHHH CS
  PF00560.28   5 LdLsgNnltslpp 17 
                 +dLs++++++l +
  MMETSP1325-20131115|5290_1 509 IDLSNCRIEDLGS 521
                 8********9776 PP

  == domain 18    score: 9.9 bits;  conditional E-value: 0.00037
                 ESEEEETSSBCBCHHHHH CS
  PF00560.28   2 LeeLdLsgNnltslppsl 19 
                 L++LdLs+N l  +p +l
  MMETSP1325-20131115|5290_1 533 LRSLDLSNNDLRLIPAEL 550
                 99**********999865 PP

  == domain 19    score: -0.5 bits;  conditional E-value: 1
                 ESEEEETSS CS
  PF00560.28   2 LeeLdLsgN 10 
                 L +L LsgN
  MMETSP1325-20131115|5290_1 556 LNSLQLSGN 564
                 889****** PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.4    0.0028       5.5       3      17 .]      29      43 ..      27      43 .. 0.95
   2 ?    1.7   0.1      0.23   4.5e+02       1      17 []      50      66 ..      50      66 .. 0.90
   3 !   10.2   0.1   0.00036      0.71       2      17 .]      74      89 ..      73      89 .. 0.94
   4 !    9.7   0.0   0.00051      0.99       3      17 .]      98     112 ..      96     112 .. 0.92
   5 !    6.0   0.1    0.0088        17       5      17 .]     120     132 ..     116     132 .. 0.87
   6 ?    2.9   0.1     0.095   1.9e+02       2      17 .]     141     156 ..     140     156 .. 0.82
   7 ?    4.4   0.1     0.029        57       2      17 .]     163     178 ..     163     178 .. 0.95
   8 ?    1.1   0.0      0.37   7.2e+02       2      17 .]     185     200 ..     183     203 .. 0.82
   9 ?    0.1   0.0      0.83   1.6e+03       7      17 .]     212     222 ..     206     222 .. 0.76
  10 ?    1.2   0.1      0.35   6.8e+02       7      14 ..     238     245 ..     230     253 .. 0.77
  11 ?    4.4   0.0     0.029        56       1      17 []     258     274 ..     258     274 .. 0.90
  12 ?    2.4   0.0      0.13   2.6e+02       1      15 [.     281     295 ..     281     297 .. 0.88
  13 ?    5.4   0.0     0.014        27       2      17 .]     376     391 ..     375     391 .. 0.94
  14 ?    5.4   0.4     0.014        27       2      17 .]     399     414 ..     398     414 .. 0.92
  15 ?   -0.5   0.0       1.2   2.4e+03       8      16 ..     417     425 ..     416     432 .. 0.80
  16 !    7.8   0.0    0.0022       4.4       2      17 .]     454     469 ..     453     469 .. 0.91
  17 ?   -0.3   0.0       1.1   2.2e+03       2      15 ..     478     491 ..     477     493 .. 0.83
  18 ?    5.2   0.0     0.016        32       3      16 ..     506     519 ..     504     523 .. 0.74
  19 ?    5.8   0.7      0.01        20       3      14 ..     533     544 ..     531     547 .. 0.85
  20 ?   -0.5   0.0       1.3   2.5e+03       2      12 ..     555     565 ..     554     569 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0028
   PF13504.1  3 LkeLdLsgnrLtsLP 17
                L++LdLs n+L +LP
  MMETSP1325-20131115|5290_1 29 LRTLDLSLNDLSTLP 43
                9*************9 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.23
   PF13504.1  1 pnLkeLdLsgnrLtsLP 17
                p L++L  +++rL  LP
  MMETSP1325-20131115|5290_1 50 PALQKLLARSCRLSNLP 66
                57999999******998 PP

  == domain 3    score: 10.2 bits;  conditional E-value: 0.00036
   PF13504.1  2 nLkeLdLsgnrLtsLP 17
                +L +LdLs+n+L ++P
  MMETSP1325-20131115|5290_1 74 HLVVLDLSHNNLSQIP 89
                799***********99 PP

  == domain 4    score: 9.7 bits;  conditional E-value: 0.00051
   PF13504.1   3 LkeLdLsgnrLtsLP 17 
                 L +LdLs+n+L +LP
  MMETSP1325-20131115|5290_1  98 LADLDLSHNQLAQLP 112
                 889***********9 PP

  == domain 5    score: 6.0 bits;  conditional E-value: 0.0088
   PF13504.1   5 eLdLsgnrLtsLP 17 
                 +L Ls nrLtsLP
  MMETSP1325-20131115|5290_1 120 RLCLSENRLTSLP 132
                 799*********9 PP

  == domain 6    score: 2.9 bits;  conditional E-value: 0.095
   PF13504.1   2 nLkeLdLsgnrLtsLP 17 
                 +L  Ld+s+n+L  LP
  MMETSP1325-20131115|5290_1 141 KLSLLDISHNSLAVLP 156
                 67789******98776 PP

  == domain 7    score: 4.4 bits;  conditional E-value: 0.029
   PF13504.1   2 nLkeLdLsgnrLtsLP 17 
                 +L++L+  +n+L++LP
  MMETSP1325-20131115|5290_1 163 SLQTLHAQHNQLQTLP 178
                 69*************9 PP

  == domain 8    score: 1.1 bits;  conditional E-value: 0.37
   PF13504.1   2 nLkeLdLsgnrLtsLP 17 
                 +L + dL+ nrL s+P
  MMETSP1325-20131115|5290_1 185 SLAVIDLRENRLASVP 200
                 6777799*****9876 PP

  == domain 9    score: 0.1 bits;  conditional E-value: 0.83
   PF13504.1   7 dLsgnrLtsLP 17 
                  Ls n+Lt LP
  MMETSP1325-20131115|5290_1 212 LLSFNQLTVLP 222
                 5899****998 PP

  == domain 10    score: 1.2 bits;  conditional E-value: 0.35
   PF13504.1   7 dLsgnrLt 14 
                 +Ls+n+Lt
  MMETSP1325-20131115|5290_1 238 HLSNNHLT 245
                 79****87 PP

  == domain 11    score: 4.4 bits;  conditional E-value: 0.029
   PF13504.1   1 pnLkeLdLsgnrLtsLP 17 
                 p L +Ld+s ++  +LP
  MMETSP1325-20131115|5290_1 258 PTLHTLDVSQCDVADLP 274
                 6799*******999988 PP

  == domain 12    score: 2.4 bits;  conditional E-value: 0.13
   PF13504.1   1 pnLkeLdLsgnrLts 15 
                 p+L++L ++gn+++ 
  MMETSP1325-20131115|5290_1 281 PKLQRLIVNGNPIKR 295
                 78*********9975 PP

  == domain 13    score: 5.4 bits;  conditional E-value: 0.014
   PF13504.1   2 nLkeLdLsgnrLtsLP 17 
                 nL  Ld +g++L  LP
  MMETSP1325-20131115|5290_1 376 NLVSLDMAGCGLRALP 391
                 8999*********998 PP

  == domain 14    score: 5.4 bits;  conditional E-value: 0.014
   PF13504.1   2 nLkeLdLsgnrLtsLP 17 
                 +L+ L++s+n L +LP
  MMETSP1325-20131115|5290_1 399 QLQSLNVSNNLLATLP 414
                 79**********9998 PP

  == domain 15    score: -0.5 bits;  conditional E-value: 1.2
   PF13504.1   8 LsgnrLtsL 16 
                 L g++Lt+L
  MMETSP1325-20131115|5290_1 417 LLGCPLTTL 425
                 568999887 PP

  == domain 16    score: 7.8 bits;  conditional E-value: 0.0022
   PF13504.1   2 nLkeLdLsgnrLtsLP 17 
                 +Lk+LdL++n+L+ +P
  MMETSP1325-20131115|5290_1 454 SLKDLDLRRNSLDAVP 469
                 7***********9877 PP

  == domain 17    score: -0.3 bits;  conditional E-value: 1.1
   PF13504.1   2 nLkeLdLsgnrLts 15 
                  L  L L gn + +
  MMETSP1325-20131115|5290_1 478 ALHSLALGGNAIRQ 491
                 6899******9876 PP

  == domain 18    score: 5.2 bits;  conditional E-value: 0.016
   PF13504.1   3 LkeLdLsgnrLtsL 16 
                 L + dLs++r+++L
  MMETSP1325-20131115|5290_1 506 LGFIDLSNCRIEDL 519
                 66789*****8765 PP

  == domain 19    score: 5.8 bits;  conditional E-value: 0.01
   PF13504.1   3 LkeLdLsgnrLt 14 
                 L+ LdLs+n+L 
  MMETSP1325-20131115|5290_1 533 LRSLDLSNNDLR 544
                 7********986 PP

  == domain 20    score: -0.5 bits;  conditional E-value: 1.3
   PF13504.1   2 nLkeLdLsgnr 12 
                  L  L Lsgn+
  MMETSP1325-20131115|5290_1 555 TLNSLQLSGNP 565
                 5789*****96 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.019        37       4      16 ..      29      41 ..      26      54 .. 0.84
   2 !    8.5   0.1    0.0011       2.1       2      16 ..      73      87 ..      72     100 .. 0.82
   3 ?    3.1   0.1     0.061   1.2e+02       6      14 ..     100     108 ..      95     112 .. 0.86
   4 ?    1.6   0.0      0.18   3.6e+02       5      17 ..     119     131 ..     115     138 .. 0.78
   5 ?    0.8   0.0      0.34   6.5e+02       3      14 ..     141     152 ..     139     157 .. 0.86
   6 ?    1.1   0.1      0.28   5.4e+02       3      15 ..     163     175 ..     161     196 .. 0.84
   7 ?   -1.7   0.0       2.2   4.3e+03       9      15 ..     213     219 ..     206     221 .. 0.76
   8 ?    0.8   0.1      0.35   6.8e+02       6      15 ..     236     245 ..     232     255 .. 0.74
   9 ?    5.1   0.0     0.013        26       1      16 [.     257     272 ..     257     277 .. 0.87
  10 ?    1.3   0.0      0.24   4.7e+02       1      14 [.     280     293 ..     280     296 .. 0.90
  11 ?    1.1   0.0      0.27   5.4e+02       3      14 ..     376     387 ..     375     396 .. 0.85
  12 !    7.5   0.2    0.0023       4.4       1      14 [.     397     410 ..     397     419 .. 0.88
  13 ?   -0.5   0.0      0.89   1.7e+03       4      14 ..     422     432 ..     420     448 .. 0.70
  14 ?    2.6   0.0     0.091   1.8e+02       3      15 ..     454     466 ..     452     470 .. 0.89
  15 ?   -2.5   0.0       3.9   7.6e+03       4      15 ..     479     490 ..     476     493 .. 0.78
  16 !    5.8   0.1    0.0079        16       7      20 ..     509     522 ..     502     527 .. 0.81
  17 !    6.7   0.5    0.0042       8.2       3      14 ..     532     543 ..     530     548 .. 0.87
  18 ?    2.3   0.0      0.11   2.2e+02       3      22 ..     555     581 ..     554     586 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.019
   PF13516.1  4 LtsLdLsnNqigd 16
                L++LdLs N+++ 
  MMETSP1325-20131115|5290_1 29 LRTLDLSLNDLST 41
                99********987 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0011
   PF13516.1  2 knLtsLdLsnNqigd 16
                 +L +LdLs+N++++
  MMETSP1325-20131115|5290_1 73 EHLVVLDLSHNNLSQ 87
                5899********997 PP

  == domain 3    score: 3.1 bits;  conditional E-value: 0.061
   PF13516.1   6 sLdLsnNqi 14 
                 +LdLs+Nq+
  MMETSP1325-20131115|5290_1 100 DLDLSHNQL 108
                 7******98 PP

  == domain 4    score: 1.6 bits;  conditional E-value: 0.18
   PF13516.1   5 tsLdLsnNqigde 17 
                   L+Ls N +++ 
  MMETSP1325-20131115|5290_1 119 VRLCLSENRLTSL 131
                 579******9986 PP

  == domain 5    score: 0.8 bits;  conditional E-value: 0.34
   PF13516.1   3 nLtsLdLsnNqi 14 
                 +L+ Ld+s+N +
  MMETSP1325-20131115|5290_1 141 KLSLLDISHNSL 152
                 6888******86 PP

  == domain 6    score: 1.1 bits;  conditional E-value: 0.28
   PF13516.1   3 nLtsLdLsnNqig 15 
                 +L++L+ ++Nq+ 
  MMETSP1325-20131115|5290_1 163 SLQTLHAQHNQLQ 175
                 6999999999984 PP

  == domain 7    score: -1.7 bits;  conditional E-value: 2.2
   PF13516.1   9 LsnNqig 15 
                 Ls+Nq++
  MMETSP1325-20131115|5290_1 213 LSFNQLT 219
                 999*997 PP

  == domain 8    score: 0.8 bits;  conditional E-value: 0.35
   PF13516.1   6 sLdLsnNqig 15 
                 + +LsnN+++
  MMETSP1325-20131115|5290_1 236 EVHLSNNHLT 245
                 569****975 PP

  == domain 9    score: 5.1 bits;  conditional E-value: 0.013
   PF13516.1   1 lknLtsLdLsnNqigd 16 
                 l++L +Ld+s++++ d
  MMETSP1325-20131115|5290_1 257 LPTLHTLDVSQCDVAD 272
                 799*********9866 PP

  == domain 10    score: 1.3 bits;  conditional E-value: 0.24
   PF13516.1   1 lknLtsLdLsnNqi 14 
                 l++L+ L +++N+i
  MMETSP1325-20131115|5290_1 280 LPKLQRLIVNGNPI 293
                 699**********9 PP

  == domain 11    score: 1.1 bits;  conditional E-value: 0.27
   PF13516.1   3 nLtsLdLsnNqi 14 
                 nL sLd+ ++++
  MMETSP1325-20131115|5290_1 376 NLVSLDMAGCGL 387
                 89********97 PP

  == domain 12    score: 7.5 bits;  conditional E-value: 0.0023
   PF13516.1   1 lknLtsLdLsnNqi 14 
                 + +L+sL++snN +
  MMETSP1325-20131115|5290_1 397 CRQLQSLNVSNNLL 410
                 89**********76 PP

  == domain 13    score: -0.5 bits;  conditional E-value: 0.89
   PF13516.1   4 LtsLdLsnNqi 14 
                 Lt+L+ ++Nq+
  MMETSP1325-20131115|5290_1 422 LTTLQAGSNQL 432
                 999*9999996 PP

  == domain 14    score: 2.6 bits;  conditional E-value: 0.091
   PF13516.1   3 nLtsLdLsnNqig 15 
                 +L++LdL +N ++
  MMETSP1325-20131115|5290_1 454 SLKDLDLRRNSLD 466
                 79********985 PP

  == domain 15    score: -2.5 bits;  conditional E-value: 3.9
   PF13516.1   4 LtsLdLsnNqig 15 
                 L sL L++N i 
  MMETSP1325-20131115|5290_1 479 LHSLALGGNAIR 490
                 889999999985 PP

  == domain 16    score: 5.8 bits;  conditional E-value: 0.0079
   PF13516.1   7 LdLsnNqigdeGls 20 
                 +dLsn+ i d G  
  MMETSP1325-20131115|5290_1 509 IDLSNCRIEDLGSL 522
                 69********9965 PP

  == domain 17    score: 6.7 bits;  conditional E-value: 0.0042
   PF13516.1   3 nLtsLdLsnNqi 14 
                  L+sLdLsnN++
  MMETSP1325-20131115|5290_1 532 LLRSLDLSNNDL 543
                 59********97 PP

  == domain 18    score: 2.3 bits;  conditional E-value: 0.11
   PF13516.1   3 nLtsLdLsnNq.......igdeGlsaL 22 
                 +L sL+Ls+N+       i d+G  a+
  MMETSP1325-20131115|5290_1 555 TLNSLQLSGNPqktvrtaILDQGTPAI 581
                 5789****9987777777777776655 PP

>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   6.2    0.0012       2.3     279     322 ..     589     633 ..     584     648 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0012
   PF04684.8 279 lptahqlsgadqhqvqlqhqhqhq.qqrdvqhqhqqqsqdqhqeq 322
                 lp+++ql    +hq q+q qhq+  qqrdv+ + q  s+ + q++
  MMETSP1325-20131115|5290_1 589 LPEGYQLPHEHHHQAQHQAQHQQPpQQRDVNVRMQPSSRSRPQNE 633
                 899999999989888888888776799999999888887766664 PP

>> PF07725.7  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.009        18       1      12 [.      74      85 ..      74      88 .. 0.91
   2 ?    1.8   0.0      0.11   2.2e+02       2      12 ..      98     108 ..      98     111 .. 0.88
   3 ?   -3.0   0.0       3.8   7.3e+03       8      15 ..     170     177 ..     170     177 .. 0.90
   4 ?   -3.4   0.0       4.8   9.3e+03       2      12 ..     186     196 ..     186     196 .. 0.84
   5 ?    2.1   0.1     0.086   1.7e+02       2      12 ..     455     465 ..     454     466 .. 0.90

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.009
   PF07725.7  1 nLVeLnlrySkl 12
                +LV L+l +++l
  MMETSP1325-20131115|5290_1 74 HLVVLDLSHNNL 85
                9**********9 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.11
   PF07725.7   2 LVeLnlrySkl 12 
                 L++L+l +++l
  MMETSP1325-20131115|5290_1  98 LADLDLSHNQL 108
                 89*******99 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 3.8
   PF07725.7   8 rySklekL 15 
                 ++++l++L
  MMETSP1325-20131115|5290_1 170 QHNQLQTL 177
                 79****98 PP

  == domain 4    score: -3.4 bits;  conditional E-value: 4.8
   PF07725.7   2 LVeLnlrySkl 12 
                 L+ ++lr ++l
  MMETSP1325-20131115|5290_1 186 LAVIDLRENRL 196
                 78899**9986 PP

  == domain 5    score: 2.1 bits;  conditional E-value: 0.086
   PF07725.7   2 LVeLnlrySkl 12 
                 L +L+lr++ l
  MMETSP1325-20131115|5290_1 455 LKDLDLRRNSL 465
                 99******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (662 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.09u 0.36s 00:00:01.45 Elapsed: 00:00:00.56
# Mc/sec: 2783.14
//
Query:       MMETSP1325-20131115|5295_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|5294_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 596.74
//
Query:       MMETSP1325-20131115|5296_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|5293_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.082   12.4   0.1         10    5.6   0.0    2.2  2  PF13679.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF13679.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0011        15     125     139 ..      17      31 ..       5      33 .. 0.75
   2 ?    5.6   0.0   0.00075        10      89     117 ..      44      72 ..      34      83 .. 0.70

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0011
   PF13679.1 125 akllvlvpCCyhels 139
                 a+   lv CC+h l+
  MMETSP1325-20131115|5293_1  17 ATSATLVLCCQHALR 31 
                 45567899****997 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.00075
   PF13679.1  89 gtiaeatpkesvdvviaLHaCdtltdeal 117
                  +  +++ k+s  + ++LH+C +   + l
  MMETSP1325-20131115|5293_1  44 SEEGGDDVKSSCPLCLGLHTCYNGRYNEL 72 
                 444555568888899******87665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 377.73
//
Query:       MMETSP1325-20131115|5297_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 408.27
//
Query:       MMETSP1325-20131115|5298_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 330.70
//
Query:       MMETSP1325-20131115|5300_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.64
# Mc/sec: 778.82
//
Query:       MMETSP1325-20131115|5301_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 449.32
//
Query:       MMETSP1325-20131115|5299_1  [L=662]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.054   12.0   0.6      0.094   11.2   0.0    1.6  2  PF10428.4 RAM signalling pathway protein


Domain annotation for each model (and alignments):
>> PF10428.4  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   6.9e-06     0.094     293     355 ..     115     270 ..      89     301 .. 0.83
   2 ?   -3.4   0.1      0.19   2.6e+03     240     267 ..     618     645 ..     534     653 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.9e-06
   PF10428.4 293 klvlrvlpqlteeisksaiastssrqltpslve..............................................................................................klkeLiekcrqalqlteaLrerLsllktke 355
                  +v++vl   t  +++s++++++ ++ + ++++                                                                                              +lk L+++c +++ +++ L++rL+  +t+ 
  MMETSP1325-20131115|5299_1 115 AAVVAVLATATVRLRSSSQNDETRSD-QMHVASgacgslvtmcrgrtavavdvvnaggltylvelaprlanaatllativfqtnvhrsaladgdgaacdnlvvstvsmlstgapavnaadaktihraALKMLTSLCADSDSMSARLGQRLRATNTRR 270
                 46778888888888888888888888.77777778889999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999**********************9887544 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 0.19
   PF10428.4 240 ssaissgatprsgesfrslptsstssvn 267
                 s+    +++pr+g s+ +l+ s+t  v 
  MMETSP1325-20131115|5299_1 618 SAYDALPSPPRTGASAAPLSPSNTDAVD 645
                 2333345677777777777777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (662 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       544  (0.0397894); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.06u 0.36s 00:00:01.42 Elapsed: 00:00:00.74
# Mc/sec: 2143.77
//
Query:       MMETSP1325-20131115|5302_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|5303_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 701.16
//
Query:       MMETSP1325-20131115|5304_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 323.95
//
Query:       MMETSP1325-20131115|5306_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 367.44
//
Query:       MMETSP1325-20131115|5307_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00074   18.6   0.2     0.0014   17.7   0.1    1.3  1  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.012   15.6   0.0      0.021   14.8   0.0    1.4  1  PF13499.1  EF-hand domain pair
       0.02   14.0   0.1      0.034   13.3   0.1    1.3  1  PF00036.27 EF hand
      0.023   14.4   0.1      0.045   13.5   0.0    1.4  1  PF13405.1  EF-hand domain


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1     4e-07    0.0014       5      23 ..      13      31 ..       9      33 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 4e-07
                HHHH--S----B-HHHHHH CS
   PF13202.1  5 FrafDlNgDGkIsreELkr 23
                F+ +D+ gDG+++re+Lk+
  MMETSP1325-20131115|5307_1 13 FQDLDASGDGTLTREDLKA 31
                *****************86 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   6.2e-06     0.021       4      32 ..      11      39 ..       7      60 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 6.2e-06
   PF13499.1  4 eaFkllDkdgdgyldkeeLlrllkhlgse 32
                 +F+ lD +gdg+l++e+L++ ++ + s 
  MMETSP1325-20131115|5307_1 11 MRFQDLDASGDGTLTREDLKAKIREHVST 39
                47*****************9877777655 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1     1e-05     0.034       3      24 ..      10      31 ..       8      35 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1e-05
                HHHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfke 24
                +  F+ +D  gdG+++ e++k+
  MMETSP1325-20131115|5307_1 10 EMRFQDLDASGDGTLTREDLKA 31
                5679***************996 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.3e-05     0.045       5      24 ..      12      31 ..       9      36 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.3e-05
                --GCC-------B---HHHH CS
   PF13405.1  5 aFklfDkdgdGkidaeELrd 24
                 F+ +D  gdG++++e+L++
  MMETSP1325-20131115|5307_1 12 RFQDLDASGDGTLTREDLKA 31
                5999**************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.41s 00:00:00.94 Elapsed: 00:00:00.57
# Mc/sec: 1053.57
//
Query:       MMETSP1325-20131115|5310_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 225.54
//
Query:       MMETSP1325-20131115|5311_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 535.36
//
Query:       MMETSP1325-20131115|5312_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0017   16.4   1.2      0.002   16.2   0.9    1.0  1  PF05557.8  Mitotic checkpoint protein
  ------ inclusion threshold ------
       0.19   11.8   1.4       0.22   11.6   1.0    1.1  1  PF09969.4  Uncharacterized conserved protein (DUF2203)
       0.26   11.0   4.8       0.32   10.7   3.3    1.1  1  PF02203.10 Tar ligand binding domain homologue
        4.6    7.1  11.7        6.2    6.7   5.8    2.1  2  PF01346.13 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
        9.9    6.0  18.1         18    5.1  12.2    1.6  1  PF14265.1  Domain of unknown function (DUF4355)


Domain annotation for each model (and alignments):
>> PF05557.8  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.9   7.2e-07     0.002     327     400 ..       4      75 ..       2      80 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 7.2e-07
   PF05557.8 327 laqdigLelrtPedlsrrivvLqneevklkekkssiessikqLettlqqLqeelekaaseilelkkkleelkal 400
                 l+  +g  + tPed+++ + +L n+     +kk+ +e + k     ++ L+++ +  +++i+++++kl +   +
  MMETSP1325-20131115|5312_1   4 LQHHHGEVMFTPEDVKNALAALDNRRQAEMKKKEAAEAKRK--ARYQEMLDQGKKAMQANIEKENEKLAKGASQ 75 
                 6667776678**************98666555555555555..59999*****999***********9876555 PP

>> PF09969.4  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.0     8e-05      0.22       2      71 ..      12      81 ..      11     100 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8e-05
   PF09969.4  2 yFtleeAnellpeieelleevkelkaeleel.eealeeaekeleaeelkeeleeleeqiraaieeieelGv 71
                +Ft e++++ l  ++++ +   ++k+ +e   +++++e+ +   ++++++++e+ +e++ +  ++ e lG+
  MMETSP1325-20131115|5312_1 12 MFTPEDVKNALAALDNRRQAEMKKKEAAEAKrKARYQEMLD-QGKKAMQANIEKENEKLAKGASQAEGLGL 81
                79***********9987665544444444440344444444.46888888999999999998888888886 PP

>> PF02203.10  Tar ligand binding domain homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.3   0.00012      0.32     107     170 ..      14      75 ..       9      78 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00012
                 .-GGGHHHHHHHHHHHHH.HHHHHHHHHHHHH---HHHHHHS-----TTT-------HHHHHHH CS
  PF02203.10 107 eaeeeealadelkakykqylksgleeliaaleagdldaffdqptqkmqdlfealtraweaqaae 170
                 ++e+ ++  ++l+ ++++  +   +e+++a ++ +++++ dq +++mq+  e+ + + ++ a++
  MMETSP1325-20131115|5312_1  14 TPEDVKNALAALDNRRQA--EMKKKEAAEAKRKARYQEMLDQGKKAMQANIEKENEKLAKGASQ 75 
                 454555666777777777..44557*****************************9999984443 PP

>> PF01346.13  Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.8    0.0023       6.2      60     103 ..       8      57 ..       3      66 .. 0.69
   2 ?    1.2   1.9      0.12   3.2e+02      70      97 ..      47      74 ..      43      80 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0023
  PF01346.13  60 gkesklteeeiqkvlqalqkklqakqeekakkk......aeenkaegeaF 103
                 ++e + t e+++++l+al+++ qa++++k++++       +e +++g++ 
  MMETSP1325-20131115|5312_1   8 HGEVMFTPEDVKNALAALDNRRQAEMKKKEAAEakrkarYQEMLDQGKKA 57 
                 5778899************9999999888776623333344445555555 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.12
  PF01346.13 70 iqkvlqalqkklqakqeekakkkaeenk 97
                +q++l + +k +qa+ e++ +k a+ + 
  MMETSP1325-20131115|5312_1 47 YQEMLDQGKKAMQANIEKENEKLAKGAS 74
                5666777777777777666666665544 PP

>> PF14265.1  Domain of unknown function (DUF4355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  12.2    0.0067        18       5      61 ..      10      72 ..       7     100 .. 0.58

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0067
   PF14265.1  5 ektftdkevdkaiakekakwekeqqek.keea...eklakmsaeekae..keleklkkeleel 61
                e +ft ++v+ a+a+ +++ ++e ++k   ea   +++++m ++ k++  + +ek++++l++ 
  MMETSP1325-20131115|5312_1 10 EVMFTPEDVKNALAALDNRRQAEMKKKeAAEAkrkARYQEMLDQGKKAmqANIEKENEKLAKG 72
                67899999*999998888888877632222221113344444444333234444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1955  (0.142993); expected 273.4 (0.02)
Passed bias filter:                     1180  (0.0863078); expected 273.4 (0.02)
Passed Vit filter:                       122  (0.00892335); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.44s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 465.45
//
Query:       MMETSP1325-20131115|5305_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.9   0.1       0.19   11.3   0.0    1.3  1  PF06563.6 Protein of unknown function (DUF1125)


Domain annotation for each model (and alignments):
>> PF06563.6  Protein of unknown function (DUF1125)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.4e-05      0.19       3      31 ..      99     127 ..      97     130 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.4e-05
   PF06563.6   3 vilKdeknriivrFkfGdDiEvFsasFLy 31 
                 v++K+   r  ++++fGd  + Fs  FL+
  MMETSP1325-20131115|5305_1  99 VMIKQSEHRTSMKYEFGDCTNRFSLYFLF 127
                 789*************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 713.91
//
Query:       MMETSP1325-20131115|5314_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 283.21
//
Query:       MMETSP1325-20131115|5316_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|5317_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        8.3    6.9   8.1         18    5.8   5.6    1.8  1  PF03964.10 Chorion family 2


Domain annotation for each model (and alignments):
>> PF03964.10  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   5.6    0.0013        18      15      65 ..      39      98 ..      11     109 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0013
  PF03964.10 15 qpaltvkaivsYgr.....argnsgygrs.......gslvssssdssAaaaAasalaalnaGs 65
                +pa+ + a v Y+          sg  ++           ss+s++ A+aaA  a aa ++G+
  MMETSP1325-20131115|5317_1 39 APASIPTACVEYRSitkepI---SGESTRatlssapLKPMSSPSEPGASAAACEATAAFASGR 98
                56666666666665443220...3333333333433445789*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|5318_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   14.7   0.2      0.025   13.7   0.1    1.6  2  PF00036.27 EF hand
      0.021   14.0   0.2       0.06   12.6   0.1    1.8  2  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.23   1.6e+03      13      20 ..      32      39 ..      32      40 .. 0.85
   2 ?   13.7   0.1   3.7e-06     0.025       4      18 ..      42      56 .]      39      56 .] 0.89

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.23
                TSSEBEHH CS
  PF00036.27 13 gdGkIsfe 20
                g+G ++fe
  MMETSP1325-20131115|5318_1 32 GTGNLDFE 39
                78999997 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 3.7e-06
                HHHHHHCTTTSSEBE CS
  PF00036.27  4 eaFkefDkDgdGkIs 18
                ++F+ +D+D++G+I+
  MMETSP1325-20131115|5318_1 42 RVFERADVDRNGRID 56
                79************8 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.18   1.2e+03      12      19 ..      32      39 ..      32      39 .. 0.83
   2 ?   12.6   0.1   8.7e-06      0.06       4      17 ..      43      56 .]      38      56 .] 0.91

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.18
                ----B-HH CS
   PF13202.1 12 gDGkIsre 19
                g G +++e
  MMETSP1325-20131115|5318_1 32 GTGNLDFE 39
                67999997 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 8.7e-06
                HHHHH--S----B- CS
   PF13202.1  4 tFrafDlNgDGkIs 17
                +F+++D+++ G+I+
  MMETSP1325-20131115|5318_1 43 VFERADVDRNGRID 56
                7************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|5323_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|5324_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.75
# Mc/sec: 255.61
//
Query:       MMETSP1325-20131115|5325_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.1e-15   54.6   0.3    7.2e-15   54.3   0.2    1.1  1  PF05486.7 Signal recognition particle 9 kDa protein (SRP9)
  ------ inclusion threshold ------
      0.025   13.7   0.1       0.03   13.4   0.0    1.1  1  PF04045.9 Arp2/3 complex, 34 kD subunit p34-Arc


Domain annotation for each model (and alignments):
>> PF05486.7  Signal recognition particle 9 kDa protein (SRP9)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.2     1e-18   7.2e-15       2      76 ..      13      80 ..      12      83 .. 0.94

  Alignments for each domain:
  == domain 1    score: 54.3 bits;  conditional E-value: 1e-18
   PF05486.7  2 lktwdeFleqSslLleanPstTrittkYshpskkkstatltlKttdpksGiclkYktnkakevsRllkflgklgv 76
                +++ +eF ++ ++L+ ++P++Tr+++kY+h     ++a ++l++t++++  clkY  n+  +v++ +k+++  + 
  MMETSP1325-20131115|5325_1 13 FENFEEFADRCKELYTESPDKTRMVVKYKH-----NNAMIYLRCTNDRV--CLKYYSNQHVDVKKYEKLNSWIMA 80
                6799**************************.....9*************..*****************9987765 PP

>> PF04045.9  Arp2/3 complex, 34 kD subunit p34-Arc
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.4e-06      0.03      71     118 ..      10      58 ..       4      68 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.4e-06
   PF04045.9  71 aapfekafeklaeleeeaekaeeeevlvikyRd.dEtiyikpskdrvtv 118
                 +a fe++ e+ ++ +e ++++ +++++v+ky++ +  iy++ ++drv +
  MMETSP1325-20131115|5325_1  10 SADFENFEEFADRCKELYTESPDKTRMVVKYKHnNAMIYLRCTNDRVCL 58 
                 5678877777788888888889**********977789*********76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.44s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 508.03
//
Query:       MMETSP1325-20131115|5322_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-43  149.0   0.0    2.6e-43  148.2   0.0    1.3  1  PF05021.10 NPL4 family
    2.1e-05   24.1   0.0    3.7e-05   23.3   0.0    1.4  1  PF01398.16 JAB1/Mov34/MPN/PAD-1 ubiquitin protease


Domain annotation for each model (and alignments):
>> PF05021.10  NPL4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.2   0.0   3.8e-47   2.6e-43       1     285 [.      41     283 ..      41     295 .. 0.90

  Alignments for each domain:
  == domain 1    score: 148.2 bits;  conditional E-value: 3.8e-47
  PF05021.10   1 RfGflyGryeedekvplGikavveaIYEPpQedeedgvtlledeeekkvdeiakklGLervGvIftdltdagakdgtvlckrhkdsyfLsslEvitaAklqlkhpkatkysetgefgskfvtcvisgd.eegeieieayqvSdqaeaLvkadiiepstdpsvlyvresskkryvpevfykkkneYgkevkenakPfpveyllVtvthgfpkepkplFksskFpieNRealgesqdlsalkkylksskkkeslerlsdFhlLlylakl.eild.keevkllleavkekd 285
                 R+G+lyG++e+d+       +vv+++YEPpQe++ +g++l+ed+ +++v+++a++lG++rvG+If +                ++ ++ s++Ev++aA+ ql+         +g   + fvt+  + d e+g+ +++ +qvS q++ +v ++ +    d + + + +       p +   k    gk  ++    ++ +++l t++ +++++p     + +Fp+ NR    ++q+ ++lk+ l++   k++ e lsdFhlLl+l+ + ++++  +++ +++eavk+ d
  MMETSP1325-20131115|5322_1  41 RIGYLYGTFEDDN------SVVVHTVYEPPQECTAEGFELMEDPRAEQVERLAEMLGMRRVGWIFAHPP-------------REEGFMFSAEEVMFAAMEQLEA-------AQGVDKTPFVTIRCTVDpEDGSASVDPFQVSLQCMDMVAEGALGADPDNRSAVMVS-------PTFTAIKE---GKRAET----IESQFFLLTIPIKDHTSPI---LRRHFPMANRIG--STQSTDELKDLLSNPGGKSVTECLSDFHLLLFLMDFqDMFNwTNDMPKICEAVKNPD 283
                 9************......99**********************************************98.............5689****************99.......688889999999999865899************************99988888888.......44444422...555555....999**********999988...699*******87..7*********************************98679**************9644 PP

>> PF01398.16  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   5.4e-09   3.7e-05      28      92 ..      41     103 ..      22     122 .. 0.83

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 5.4e-09
  PF01398.16  28 vmGlliGelnddttveitnvfalprsetekdvdaveldqeekksellkklrgrervVGWYhshph 92 
                  +G+l+G+ +dd++v ++ v++ p++ t++ ++  e  + e+ ++l+++l   +r VGW+  hp 
  MMETSP1325-20131115|5322_1  41 RIGYLYGTFEDDNSVVVHTVYEPPQECTAEGFELMEDPRAEQVERLAEML--GMRRVGWIFAHPP 103
                 58*****************************7766666665555555555..5**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1476.94
//
Query:       MMETSP1325-20131115|5326_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 390.52
//
Query:       MMETSP1325-20131115|5327_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-05   22.7   0.0    7.8e-05   22.5   0.0    1.1  1  PF03372.18 Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> PF03372.18  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   5.7e-09   7.8e-05     148     234 ..      11     104 ..       2     135 .. 0.68

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 5.7e-09
                 HHHHHHCCHHHH....SEEEE---S--BSSGHTTTBHHHHHSH.HCBHBCCHHHHCBTT-C--SB--TC-TTTCC.CHHB..............--S--EEBHHHCC CS
  PF03372.18 148 eidkladdsrgs....pvilaGDfNsrpdspdkgfrenaadfl.pgdgfddglrallphlllptspgttdtyeka.gepa..............rlDyilvssgwpa 234
                 +id++ +   g+    +++++GD+N+++        e+  + +  ++gf d+ ra++p+    +s  +++ty ++ + p               r+D+ +v+s+ ++
  MMETSP1325-20131115|5327_1  11 RIDQEQTIASGAsvetDMFIVGDLNAAS--------EYEDEQYeLPNGFIDAWRACHPD----ASAQQGYTYDPRmN-PLaalnsppgkvalskRCDRMMVRSRVWV 104
                 44444444444467778********777........33333335666666666666665....56677777777742.3335666778999999*******444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 733.29
//
Query:       MMETSP1325-20131115|5329_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.59
# Mc/sec: 284.31
//
Query:       MMETSP1325-20131115|5328_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|5331_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 385.30
//
Query:       MMETSP1325-20131115|5330_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   14.3   0.0      0.025   14.2   0.0    1.1  1  PF09229.6 Activator of Hsp90 ATPase, N-terminal


Domain annotation for each model (and alignments):
>> PF09229.6  Activator of Hsp90 ATPase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.9e-06     0.025      47     105 ..       7      81 ..       3     120 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.9e-06
                 ---EEEEEEEEEEEEEEEE...........ETT---.......EE----EEEEEEECCCCTT----EE--SS-SHHH CS
   PF09229.6  47 KGKkiflfelklklewege...........kkeeee.......kkvkGtveipelsseneeedyeieikvtdkkkes 105
                  GK  + f+++++l we++           k +  +        ++kG +  p+++s ++ +dy++e    ++ +++
  MMETSP1325-20131115|5330_1   7 QGKWDHNFDFSFTLPWEAKigrprvqtvevKGK--KqkmfkgiPTFKGFLRFPDVTSLTDPSDYDVELIWGGDGPKK 81 
                 6888899************99999999876333..2347788899*********************98766665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|5332_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-06   27.6   1.0    2.9e-06   27.1   0.7    1.2  1  PF04191.8  Phospholipid methyltransferase
    2.4e-06   26.8   1.6    3.3e-06   26.4   1.1    1.2  1  PF06966.7  Protein of unknown function (DUF1295)
    4.3e-05   23.2   0.2    5.8e-05   22.7   0.1    1.2  1  PF02544.11 3-oxo-5-alpha-steroid 4-dehydrogenase
     0.0005   20.1   0.1    0.00076   19.5   0.1    1.2  1  PF04140.9  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
  ------ inclusion threshold ------
      0.087   12.1   1.2       0.17   11.2   0.1    2.0  2  PF09005.5  Domain of unknown function (DUF1897)


Domain annotation for each model (and alignments):
>> PF04191.8  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.7   1.1e-09   2.9e-06      39      87 ..       7      55 ..       1      69 [. 0.79

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 1.1e-09
   PF04191.8 39 sdelvtsGiYrvlrNPmyvgstlgflGlaLitgslaglllallvllvyl 87
                ++ l+t+G +  +r+P y g ++++ G a+++++++ ++++++v+l ++
  MMETSP1325-20131115|5332_1  7 KRGLITTGLFALVRHPNYSGEMMLYGGFAVMVPHWIPMAVLAWVWLQVF 55
                4559*******************************96555555554444 PP

>> PF06966.7  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   1.1   1.2e-09   3.3e-06     154     234 ..       9      78 ..       2      79 .. 0.74

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 1.2e-09
   PF06966.7 154 kvldsGLwrysRHPNYfgealiWwglflialealeglealaiagpllltlllvfvsgipllEkkalkkykdkeeyreYqkk 234
                  ++++GL+ + RHPNY ge++++ g+ ++   +      ++ ++ l  ++l vfv  +   E+++ ++    +e++eY ++
  MMETSP1325-20131115|5332_1   9 GLITTGLFALVRHPNYSGEMMLYGGFAVMV-PH------WIPMAVLAWVWLQVFVPNMMRKEASMSRY----PEWAEYYAR 78 
                 5789******************98887653.33......33344455788999999998999888884....456666555 PP

>> PF02544.11  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.1   2.1e-08   5.8e-05      72     134 ..       6      68 ..       3      85 .. 0.72

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 2.1e-08
  PF02544.11  72 tkykiprgglFelvsapnyfgEilewigyalvtkslaalaFalftvlnltvraaahhkwykkk 134
                 +k+ + + glF lv  pny gE++ + g+a++++ +  +a   ++ l+++v  +   +    +
  MMETSP1325-20131115|5332_1   6 YKRGLITTGLFALVRHPNYSGEMMLYGGFAVMVPHWIPMAVLAWVWLQVFVPNMMRKEASMSR 68 
                 566677899*************************99888777777776666555444433333 PP

>> PF04140.9  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   2.8e-07   0.00076      34      81 ..       9      55 ..       3      67 .. 0.65

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 2.8e-07
   PF04140.9 34 klvksglykylrHPnYllfvilelatllLlcnakltalvllalvalll 81
                 l+++gl++ +rHPnY + ++l  + ++++ +   +a vl  + + ++
  MMETSP1325-20131115|5332_1  9 GLITTGLFALVRHPNYSGEMMLYGGFAVMVPHWIPMA-VLAWVWLQVF 55
                589***************7777666666666553333.3333333333 PP

>> PF09005.5  Domain of unknown function (DUF1897)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   6.2e-05      0.17      14      24 ..      71      81 ..      70      82 .. 0.92
   2 ?   -2.4   0.0       1.1     3e+03      25      33 ..     106     114 ..     104     118 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.2e-05
   PF09005.5 14 qWaEYYrqiGd 24
                +WaEYY + G+
  MMETSP1325-20131115|5332_1 71 EWAEYYARTGM 81
                7********98 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 1.1
   PF09005.5  25 heeAeaveq 33 
                   +Ae+  +
  MMETSP1325-20131115|5332_1 106 KXQAEMSSE 114
                 568888555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 728.89
//
Query:       MMETSP1325-20131115|5335_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.3   0.6       0.26   10.7   0.4    1.3  1  PF10371.4 Domain of unknown function


Domain annotation for each model (and alignments):
>> PF10371.4  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.4   1.9e-05      0.26      37      59 ..       5      27 ..       3      28 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 1.9e-05
                GGGS-----B----GGGT----- CS
   PF10371.4 37 VSafpedGtfplGTaayEKRgiA 59
                +S+++e Gt+++ T+    R iA
  MMETSP1325-20131115|5335_1  5 ISTLTEVGTIETTTTTTQPRAIA 27
                79********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|5338_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 378.37
//
Query:       MMETSP1325-20131115|5339_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|5341_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-34  117.7   0.2    3.9e-34  117.5   0.2    1.0  1  PF00311.12 Phosphoenolpyruvate carboxylase


Domain annotation for each model (and alignments):
>> PF00311.12  Phosphoenolpyruvate carboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5   0.2   2.8e-38   3.9e-34     613     721 ..       2     113 ..       1     115 [. 0.92

  Alignments for each domain:
  == domain 1    score: 117.5 bits;  conditional E-value: 2.8e-38
  PF00311.12 613 glesLRAIPWvFsWtqsRlllpaWyGvgtalkevlekeeeklklLremykkwpffrtliskvemvlaKadleiaeeYvellvdkeller......lfeeireelertrelvlkit 721
                 g+e+LRAIPWvF+Wtq+Rl l+aW+Gvg+al+++   e+ + ++L++my++wp+f++l++ v+m++aK++ eia++Y+++lv + + ++      l+e++r+el+ tr+ +l++ 
  MMETSP1325-20131115|5341_1   2 GVETLRAIPWVFAWTQTRLNLTAWLGVGSALQQL---EPAQKDTLKAMYDSWPWFQALVDLVDMIMAKSEPEIAANYDRQLVAPLASAEtpelmaLGERLRDELSATRDELLELR 113
                 689******************************8...778899*************************************998765555577888***************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 567.30
//
Query:       MMETSP1325-20131115|5320_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 619.06
//
Query:       MMETSP1325-20131115|5342_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   14.6   0.3      0.023   13.9   0.2    1.3  1  PF11354.3 Protein of unknown function (DUF3156)


Domain annotation for each model (and alignments):
>> PF11354.3  Protein of unknown function (DUF3156)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   1.7e-06     0.023      10      78 ..     108     176 ..     102     201 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.7e-06
   PF11354.3  10 dsaesallrledgvrvevserverqflmhivsvefrlkvaaplaaqgsirvrqtGwlrRtgvaaalskg 78 
                 ++++ +++ l + +  +  +r  + +l +i s ++ ++++ +++  ++++ + +G+l R g+    +  
  MMETSP1325-20131115|5342_1 108 VTEDRRRAELAKSLTRRDAQREATYLLKSIYSAQLLVQGNLRRSDALRLSSQLEGALNRAGLKLDRKAV 176
                 56778888888999999999999**************************************98765443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       823  (0.060196); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1345.32
//
Query:       MMETSP1325-20131115|5344_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|5343_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-20   71.4   0.1    5.6e-20   70.9   0.0    1.3  1  PF13950.1 UDP-glucose 4-epimerase C-term subunit


Domain annotation for each model (and alignments):
>> PF13950.1  UDP-glucose 4-epimerase C-term subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   0.0   4.1e-24   5.6e-20       2      62 .]      59     119 ..      58     119 .. 0.98

  Alignments for each domain:
  == domain 1    score: 70.9 bits;  conditional E-value: 4.1e-24
   PF13950.1   2 fekasgkkipyeiverRpGDvaecyAdpskAekeLgWkaersleemcrDaWrWqsknPnGY 62 
                 ++k+sg +ipy++ +rRpGD+a +yAd++ A++  + + e   e+mc D+WrWq++nP+G+
  MMETSP1325-20131115|5343_1  59 LQKVSGMHIPYKFGPRRPGDLAMVYADATAANRXAQMEGEPLTEAMCMDMWRWQQANPQGF 119
                 689*********************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 759.70
//
Query:       MMETSP1325-20131115|5349_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|5348_1  [L=394]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-17   63.5   0.0    2.4e-17   62.9   0.0    1.2  1  PF01171.15 PP-loop family
     0.0011   18.7   0.1      0.092   12.4   0.0    2.5  3  PF01507.14 Phosphoadenosine phosphosulfate reductase family


Domain annotation for each model (and alignments):
>> PF01171.15  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.0   3.5e-21   2.4e-17       1     160 [.      92     257 ..      92     261 .. 0.78

  Alignments for each domain:
  == domain 1    score: 62.9 bits;  conditional E-value: 3.5e-21
                 EEEEE-----HHHHHHHHHHHCCTTTT-..EEEEEEE---SSTCHHHHHHHHHHHHHHCT--EEEE---H......HHHTT--TTTHHHHHHHHHHHHCHHH-..-EEE----HHHHHHHHHHHHC------------SEEE---TCEE-CCCT--HHHHHHHHHHTT CS
  PF01171.15   1 kvlvAvSGGlDSmaLlkllkklkkklgi..klvavhvdhglreeskeeaelveelckklnipleiekvdv......akkkgknleeaARelRYellkelakkegaevlllAhhadDqaEtfllrllrgsglaglagikakrelagielvRPlLkvskeeleeylkekk 160
                 +++vAvSGG+DS ++l+ll  l++kl++  k+ +  v+   ++    + + +e++ k+ ++++++ + d       ++ +gk+      +lR  +l + a++ ga++l+l+hh dD +Et+ll+++ + +++++ +   ++e  +++++RPl+ ++ +++ ey+  k+
  MMETSP1325-20131115|5348_1  92 HIMVAVSGGKDSATMLHLLILLQRKLSHllKFKITAVNLDQQQ-PGWDGSSLEAWLKEEGVEYRMLSEDTysvvkaNTPEGKTYCSLCSRLRRGILYTCAHEIGANKLALGHHSDDAVETMLLNMIHQGQMKAMPAR-YYSEERDMHVIRPLMYCRESDILEYATLKG 257
                 589********************99999784444444444333.3334456677777777777777766666666677789999999999************************************96665444443.3444567******************98765 PP

>> PF01507.14  Phosphoadenosine phosphosulfate reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   1.3e-05     0.092       2      25 ..      93     116 ..      92     134 .. 0.83
   2 ?   -3.2   0.0      0.82   5.6e+03     139     164 ..     137     162 ..     136     164 .. 0.83
   3 !    3.6   0.0    0.0069        47     128     157 ..     232     262 ..     202     267 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.3e-05
                 EEEE-----HCHHHHHHHHHHCTT CS
  PF01507.14   2 lvvsvsgGkdslVllhLalkafkp 25 
                 ++v+vsgGkds+ +lhL++  +++
  MMETSP1325-20131115|5348_1  93 IMVAVSGGKDSATMLHLLILLQRK 116
                 799**************9987776 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 0.82
                 --HHHHHHHHHHCT--B-CCCC---- CS
  PF01507.14 139 WteedvwqyilrenipynpLydqgfr 164
                 W+     +++++e+++y  L +  ++
  MMETSP1325-20131115|5348_1 137 WDGSSLEAWLKEEGVEYRMLSEDTYS 162
                 88888889999999999999887776 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.0069
                 .S-EEE-.TTTT--HHHHHHHHHHCT--B-C CS
  PF01507.14 128 ekslrvf.PllnWteedvwqyilrenipynp 157
                 e+ ++v  Pl+   e d+ +y++ ++ p+ p
  MMETSP1325-20131115|5348_1 232 ERDMHVIrPLMYCRESDILEYATLKGFPILP 262
                 34688888****************9999866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.36s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 1656.43
//
Query:       MMETSP1325-20131115|5350_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|5351_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       641  (0.0468841); expected 273.4 (0.02)
Passed bias filter:                      522  (0.0381802); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 508.61
//
Query:       MMETSP1325-20131115|5353_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.2    4.6  24.1        7.5    4.1  16.7    1.3  1  PF05110.8 AF-4 proto-oncoprotein


Domain annotation for each model (and alignments):
>> PF05110.8  AF-4 proto-oncoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  16.7   0.00055       7.5     405     463 ..      93     151 ..      10     161 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.00055
   PF05110.8 405 EdsdeeqatekpksrsaPpsapsskpepaasasdsSsSeSeSeSsSgSDSesESSssdS 463
                  d+ +   t+  k++++  + +s   e + s+ ++S+S S+S+S+S+SDS+ E S+s  
  MMETSP1325-20131115|5353_1  93 NDEGQVAGTQSDKPENTAHENASDGEELSPSSPGGSGSASGSDSDSDSDSDLEGSASSV 151
                 333333345777888888899999999999***********************887653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.39s 00:00:01.03 Elapsed: 00:00:00.52
# Mc/sec: 1506.94
//
Query:       MMETSP1325-20131115|5354_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 289.22
//
Query:       MMETSP1325-20131115|5357_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-17   62.5   3.7    1.9e-17   62.3   2.5    1.1  1  PF01423.17 LSM domain
     0.0088   15.6   0.1      0.011   15.3   0.0    1.3  1  PF11095.3  Gem-associated protein 7 (Gemin7)
     0.0092   16.2   0.3       0.01   16.1   0.2    1.1  1  PF14438.1  SM domain found in Ataxin-2
  ------ inclusion threshold ------
      0.068   13.2   0.1      0.078   13.1   0.0    1.2  1  PF11607.3  Protein of unknown function (DUF3247)
        1.8    8.2   4.2       0.41   10.2   0.4    1.7  2  PF02237.12 Biotin protein ligase C terminal domain


Domain annotation for each model (and alignments):
>> PF01423.17  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   2.5   6.9e-21   1.9e-17       2      66 ..       6      68 ..       5      70 .. 0.96

  Alignments for each domain:
  == domain 1    score: 62.3 bits;  conditional E-value: 6.9e-21
                HHHHHTTS-EEEEETTTEEEE-EEEEEETTCEEEEEEEEEEE...EEE..EE.EEEEEGGGEEEE CS
  PF01423.17  2 elqelinkrVtvelkngreveGtLkafDkfmNlvLrdvtetwkrkkknkrelgqiliRGenivlv 66
                +l +l+n++Vt+elkng+ v+Gt+ ++D  mN  +r+v+ t+k+k+    +++++ iRG+ni+++
  MMETSP1325-20131115|5357_1  6 FLMKLNNETVTIELKNGTVVQGTVSGVDVAMNTYMRNVKVTVKGKNTV--NYDTLSIRGNNIRYY 68
                89*********************************************9..*************97 PP

>> PF11095.3  Gem-associated protein 7 (Gemin7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.1e-06     0.011      15      52 ..       3      40 ..       1      52 [. 0.92

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 4.1e-06
                HHHHHHHC---EEEEEE----EEEEE---B-TTS-EEE CS
   PF11095.3 15 ylrsllamvgkpveftlhervkvaavfratdldvenfl 52
                 +r+l ++ +  v+++l +++ v++++ ++d+ ++ ++
  MMETSP1325-20131115|5357_1  3 LVRFLMKLNNETVTIELKNGTVVQGTVSGVDVAMNTYM 40
                6899***************************9998875 PP

>> PF14438.1  SM domain found in Ataxin-2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.2   3.8e-06      0.01       3      71 ..       3      63 ..       1      74 [. 0.80

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.8e-06
   PF14438.1  3 llylltnliGskveVtlknGsvyeGilhaaspestnfdvvLkaakvlkkedskgaksksivetliiqak 71
                l+ +l++l  ++v+++lknG+v++G  + ++     ++  ++++kv+ k+     k++   +tl i+++
  MMETSP1325-20131115|5357_1  3 LVRFLMKLNNETVTIELKNGTVVQGTVSGVDVA---MNTYMRNVKVTVKG-----KNTVNYDTLSIRGN 63
                77788888889**********************...89999999998882.....44445555555555 PP

>> PF11607.3  Protein of unknown function (DUF3247)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.8e-05     0.078      21      58 ..       6      43 ..       1      66 [. 0.78

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.8e-05
   PF11607.3 21 lvslldGqervrielddGsmisGtva.vrpslqtyrdea 58
                ++ +l+ +e v iel++G++++Gtv+ v  +++ty+ + 
  MMETSP1325-20131115|5357_1  6 FLMKLN-NETVTIELKNGTVVQGTVSgVDVAMNTYMRNV 43
                555555.578***************65899999998765 PP

>> PF02237.12  Biotin protein ligase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.4   0.00015      0.41       3      23 ..      12      33 ..      12      33 .. 0.93
   2 ?   -2.1   0.1       1.1   2.9e+03       4      14 ..      41      51 ..      41      53 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00015
                ---EEEE----EE.---EEEE- CS
  PF02237.12  3 GqrVtltdeggkv.eGiavGID 23
                +++Vt+++++g+v +G++ G+D
  MMETSP1325-20131115|5357_1 12 NETVTIELKNGTVvQGTVSGVD 33
                899*****999999******98 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.1
                --EEEE----E CS
  PF02237.12  4 qrVtltdeggk 14
                ++V++t +g++
  MMETSP1325-20131115|5357_1 41 RNVKVTVKGKN 51
                56777775555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 454.31
//
Query:       MMETSP1325-20131115|5358_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-07   30.9   0.0    2.4e-07   30.1   0.0    1.4  1  PF01465.15 GRIP domain
  ------ inclusion threshold ------
       0.12   11.7   6.1       0.18   11.2   4.2    1.2  1  PF04156.9  IncA protein
       0.17   11.1   1.8       0.27   10.4   1.2    1.4  1  PF10444.4  Nbl1 / Borealin N terminal
       0.18   10.5   2.8        1.7    7.3   2.0    1.9  1  PF12805.2  FUSC-like inner membrane protein yccS
       0.72    9.0   7.6        1.1    8.4   5.2    1.3  1  PF11180.3  Protein of unknown function (DUF2968)


Domain annotation for each model (and alignments):
>> PF01465.15  GRIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   8.7e-11   2.4e-07       2      44 ..      72     114 ..      71     116 .. 0.93

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 8.7e-11
  PF01465.15   2 ganleYLKNVllqFLeqkesngreqllpVistlLkFseeekqk 44 
                 ++nl+YLK+ +l +  + +   +++llpV+++lL+++ +e q 
  MMETSP1325-20131115|5358_1  72 ATNLAYLKHCVLTYVQTTDAPTHKRLLPVLAQLLHLTTAEVQA 114
                 58*****************888888***************996 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   4.2   6.5e-05      0.18      73     123 ..       7      60 ..       1      69 [. 0.67

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.5e-05
   PF04156.9  73 kiee.srlqeelsesesqlseleeeleqleerlaeleseledleedlellq..e 123
                 ++ + s+l+++++e+++q ++l + l+q+ e  ++  +  +++ + le+lq  +
  MMETSP1325-20131115|5358_1   7 QLLYmSQLHGDVAELQQQKAQLLRSLDQEKEARKKDLKAHQLVIDKLESLQahH 60 
                 444467778888888888888888888877777777777777777777777432 PP

>> PF10444.4  Nbl1 / Borealin N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.2    0.0001      0.27       1      24 [.      23      46 ..      23      58 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0001
   PF10444.4  1 eklaalLqnfdlEveeRierlrsh 24
                +++a+lL  +d+E e R + l++h
  MMETSP1325-20131115|5358_1 23 QQKAQLLRSLDQEKEARKKDLKAH 46
                69*********************9 PP

>> PF12805.2  FUSC-like inner membrane protein yccS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   2.0   0.00062       1.7     107     195 ..      13      63 ..       6     140 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00062
   PF12805.2 107 elyeelAdYleaKaslfdpdredddeqlrleLaqqnskvvealnqareillsrlkskrgqpetksrrllrlyfvaqDihErassshydY 195
                 +l   +A+ +++Ka+l+  ++ d+ +++r++ +++ + v+++l++++++                                    h + 
  MMETSP1325-20131115|5358_1  13 QLHGDVAELQQQKAQLL--RSLDQEKEARKKDLKAHQLVIDKLESLQAH------------------------------------HARA 63 
                 55555666666666666..555555555555566666666666665554....................................4333 PP

>> PF11180.3  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.2   0.00041       1.1     142     186 ..      15      59 ..       6      65 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00041
   PF11180.3 142 eaqvaarqkqarkeaaaLeaqreaaqaqLrklqrqirqLqaqqee 186
                 +  va+ q+q+ + + +L++++ea ++ L++ q  i++L+  q++
  MMETSP1325-20131115|5358_1  15 HGDVAELQQQKAQLLRSLDQEKEARKKDLKAHQLVIDKLESLQAH 59 
                 5679*********************************99976655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       983  (0.0718988); expected 273.4 (0.02)
Passed bias filter:                      653  (0.0477618); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 649.19
//
Query:       MMETSP1325-20131115|5352_1  [L=828]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-09   38.2   4.1    1.5e-09   37.9   1.5    2.1  2  PF00059.16 Lectin C-type domain
    0.00045   19.2   0.0       0.18   10.6   0.0    2.3  2  PF00144.19 Beta-lactamase
  ------ inclusion threshold ------
      0.079   12.4   0.6        5.2    6.6   0.0    2.5  2  PF02817.12 e3 binding domain


Domain annotation for each model (and alignments):
>> PF00059.16  Lectin C-type domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   1.5   3.4e-13   1.5e-09       2      97 ..     221     327 ..     220     335 .. 0.85
   2 ?   -1.4   0.0      0.54   2.5e+03       8      57 ..     579     631 ..     577     660 .. 0.61

  Alignments for each domain:
  == domain 1    score: 37.9 bits;  conditional E-value: 3.4e-13
                 EEEHHHHHHHHHHTT-EBS-HSSHHHHHHHHHHHCH..CSSEEEESEEESSTT.......TCEB.TTT-B-STTCBSTTCSTSSCCTEEEEEEETTTT..TSEEEEE CS
  PF00059.16   2 sktweeaekaCqkegakLvsiqseeeqkflkslvkk..snssaWiGlsdekke.......gefvwtdgssveytnwaegepnnkkskedCvelskkte..gkwndes 97 
                 +++w++ e a  + g++L+si+s ee++ + ++++      + W+G ++++ +       +++ w+dg++++++ w +gepnn++++ed v++ +     +kwnd +
  MMETSP1325-20131115|5352_1 221 QMNWQKHEDAAVEWGGHLTSITSMEEHEQVREMASGckDGGRCWLGGKRNEPHkgngpgpEHWSWVDGTPWDFEFWGPGEPNNRGNREDRVHMLEWFGaeMKWNDCP 327
                 89*****************************99987668899*****976543122222268*******************************98776679999965 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.54
                 HHHHHHHTT-EBS-HSSHHHH...HHHHHHHCHCSSEEEESEEESSTTTCEB. CS
  PF00059.16   8 aekaCqkegakLvsiqseeeq...kflkslvkksnssaWiGlsdekkegefvw 57 
                  +++C+++g++L+   + +++    +l +  k+   + Wi + d + +++  +
  MMETSP1325-20131115|5352_1 579 TQAMCEERGGRLAYRCELYDTdtkTLLVNDGKAFGGDKWIPVLDGDPKHNNSG 631
                 57899999999987666555533355555555566667777666666665555 PP

>> PF00144.19  Beta-lactamase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0     4e-05      0.18      53      79 ..     177     203 ..     172     235 .. 0.84
   2 !    6.0   0.0   0.00099       4.5      56      83 ..     530     557 ..     526     587 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 4e-05
                 GGTHHHHHHHHHHTTTCTGG..TTSBG CS
  PF00144.19  53 aSvtKtftaaavlqlveeGkldLddpV 79 
                 + + K+ taaa+l+lvee++l++d+  
  MMETSP1325-20131115|5352_1 177 GTMAKPATAAAALRLVEEKGLSIDEAM 203
                 5689********************866 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.00099
                 HHHHHHHHHHTTTCTGG..TTSBGGGGS CS
  PF00144.19  56 tKtftaaavlqlveeGkldLddpVskyl 83 
                  K  taaa+l+lvee++l++d+ ++  l
  MMETSP1325-20131115|5352_1 530 AKRSTAAAALRLVEEKGLEIDESLALAL 557
                 5778*****************9886655 PP

>> PF02817.12  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0011       5.2       8      28 ..     187     213 ..     187     214 .. 0.90
   2 ?    3.5   0.1     0.011        50       8      21 ..     537     550 ..     537     560 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0011
                 HHHHHHHHTT--GG......G------ CS
  PF02817.12   8 aaRkLAaekgidLs......qvkGTGp 28 
                 aa++L++ekg++++       ++GTG 
  MMETSP1325-20131115|5352_1 187 AALRLVEEKGLSIDeamvttLLTGTGV 213
                 89************9998888999985 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.011
                 HHHHHHHHTT--GG CS
  PF02817.12   8 aaRkLAaekgidLs 21 
                 aa++L++ekg++++
  MMETSP1325-20131115|5352_1 537 AALRLVEEKGLEID 550
                 89*********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (828 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.13u 0.36s 00:00:01.48 Elapsed: 00:00:00.71
# Mc/sec: 2794.62
//
Query:       MMETSP1325-20131115|5360_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-41  140.2   0.1    2.8e-41  139.7   0.1    1.2  1  PF03764.13 Elongation factor G, domain IV
    2.9e-26   91.0   0.0    5.9e-26   90.0   0.0    1.5  1  PF00679.19 Elongation factor G C-terminus


Domain annotation for each model (and alignments):
>> PF03764.13  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.7   0.1     4e-45   2.8e-41       1     119 [.      52     171 ..      52     172 .. 0.99

  Alignments for each domain:
  == domain 1    score: 139.7 bits;  conditional E-value: 4e-45
                 -EEB-----SS-EE.E-----------------EEEEEE--..----EEEE--------GGGHHHHH---TTTT-----------SEEEEEEE----TTT--HHHHHH---HHHHHHHH-- CS
  PF03764.13   1 pqVayretigkdvkerekklkkqsggdgqyakvilriePle..gggnefvdetkggqvpkefkeavekGfqealkeGplagepvtdvkvtLtdgslhevdsseaafkpaarralkeallkA 119
                 pqVayre i+++++ +++++kkqsgg+gq+a++ + +eP++  ++ +ef +e+kgg+vpke+++ v+kG++++l++Gp+ag+pv ++k+tL+dg +h+vdss +af++a+r+a +e+l+k+
  MMETSP1325-20131115|5360_1  52 PQVAYREAITQKAE-IDYTHKKQSGGSGQFARIKMIFEPKDttESDFEFQEEIKGGVVPKEYIPGVQKGIESVLSSGPIAGFPVLGMKATLIDGAYHDVDSSVMAFEIAGRMAAREGLRKG 171
                 8*************.*******************************************************************************************************986 PP

>> PF00679.19  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.0   8.6e-30   5.9e-26       1      86 [.     174     258 ..     174     261 .. 0.97

  Alignments for each domain:
  == domain 1    score: 90.0 bits;  conditional E-value: 8.6e-30
  PF00679.19   1 vllEPimeveievpeeylgkvisdltkrrGeilsmenagenrvvieaevPlaeligysteLrslTsGrgsfslefsgYepvpgekl 86 
                 +l+EP+m+v++++peey+g+v++d+++rrG + +  ++ +n+++iea vPl ++++y ++Lrs+++Gr+++s+++++Ye vp ++ 
  MMETSP1325-20131115|5360_1 174 RLMEPLMQVDVSTPEEYMGDVLGDINSRRGMVVELGER-GNTKTIEALVPLGNMFQYVSQLRSMSKGRANYSMKLAKYELVPPNVE 258
                 69************************************.*******************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.34s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1391.93
//
Query:       MMETSP1325-20131115|5361_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 577.08
//
Query:       MMETSP1325-20131115|5363_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|5364_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-09   34.8   0.1      1e-08   34.4   0.1    1.2  1  PF00023.25 Ankyrin repeat
    2.1e-06   27.8   0.0    2.4e-06   27.6   0.0    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
      1e-05   25.4   0.0    1.3e-05   25.1   0.0    1.2  1  PF13857.1  Ankyrin repeats (many copies)
    1.4e-05   24.7   0.0    2.2e-05   24.1   0.0    1.3  1  PF13606.1  Ankyrin repeat
    0.00068   19.9   0.0    0.00092   19.5   0.0    1.2  1  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.1   3.7e-12     1e-08       1      28 [.      34      61 ..      34      62 .] 0.97

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 3.7e-12
                TSCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdl 28
                dG+T+L lAa++g+l++++ L+++GAdl
  MMETSP1325-20131115|5364_1 34 DGYTALILAAMYGHLSCLEVLVEKGADL 61
                8**************************8 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   8.7e-10   2.4e-06      57      85 ..      33      61 ..      23      62 .] 0.87

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 8.7e-10
   PF12796.2 57 kegntpLhlAvrnghlelvklLlekgadv 85
                ++g+t+L+lA+++ghl ++++L+ekgad+
  MMETSP1325-20131115|5364_1 33 QDGYTALILAAMYGHLSCLEVLVEKGADL 61
                58*************************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   4.7e-09   1.3e-05      15      42 ..      34      61 ..      28      62 .] 0.92

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 4.7e-09
   PF13857.1 15 ggntpLhlAakggalevvrlLlapgadl 42
                 g+t+L lAa++g+l++++ L+++gadl
  MMETSP1325-20131115|5364_1 34 DGYTALILAAMYGHLSCLEVLVEKGADL 61
                588***********************97 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0     8e-09   2.2e-05       1      28 [.      34      61 ..      34      62 .] 0.96

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 8e-09
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadi 28
                +G+T+L lAa +g+++ +e L+e+gad+
  MMETSP1325-20131115|5364_1 34 DGYTALILAAMYGHLSCLEVLVEKGADL 61
                79*************************7 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.4e-07   0.00092      34      54 .]      35      55 ..      25      61 .. 0.66

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 3.4e-07
   PF13637.1 34 GntaLhiAalrgnieilklLl 54
                G taL++Aa++g++++l+ L+
  MMETSP1325-20131115|5364_1 35 GYTALILAAMYGHLSCLEVLV 55
                566666666666666666553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|5355_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.5    8.6   4.0        1.6    8.5   2.8    1.1  1  PF10138.4 Tellurium resistance protein


Domain annotation for each model (and alignments):
>> PF10138.4  Tellurium resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.8   0.00012       1.6       4      43 ..       5      45 ..       1      55 [. 0.65

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00012
   PF10138.4  4 papapapaaapapapv.paaakvslskitLtkekpsvsLek 43
                 a+a+a+aaa+a+ +v +++a v+ s ++ t +++ vs+  
  MMETSP1325-20131115|5355_1  5 AAAAAAAAAAAAAVAVaASSAAVAASAVSATSAASAVSVAA 45
                3333333444444444355556***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1383  (0.101156); expected 273.4 (0.02)
Passed bias filter:                      460  (0.0336454); expected 273.4 (0.02)
Passed Vit filter:                       100  (0.00731422); expected 13.7 (0.001)
Passed Fwd filter:                        30  (0.00219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.45s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 248.19
//
Query:       MMETSP1325-20131115|5359_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-15   55.2   3.3    7.2e-15   54.7   2.3    1.1  1  PF08507.5  COPI associated protein
  ------ inclusion threshold ------
        4.7    6.3  23.2        5.9    6.0  16.1    1.1  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF08507.5  COPI associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   2.3   1.1e-18   7.2e-15       2     112 ..     135     250 ..     134     274 .. 0.82

  Alignments for each domain:
  == domain 1    score: 54.7 bits;  conditional E-value: 1.1e-18
   PF08507.5   2 lskifrivnivvgvllilagilqlikvlslksiilsvYvIlfGlliillEfklki....lykyasFlfsflGRGlfyiflgtlllsssvlsiiiglllflv.Gliyivlhfvssie 112
                 l + +r++n+v+++l+++ +il+   + +l++ +l++Yv +fG l+   E +lk     + +   Fl+s  GR +f i+++tl++s +v   i g l + v  l   v+  ++++e
  MMETSP1325-20131115|5359_1 135 LVTYMRLANVVIAILMVTSAILNSLGNADLSTLVLGCYVSCFGCLLCCFETHLKQvsimIADNCGFLYSAKGRCVFLILIATLCFSLNVIGKITGGLTVAVaCLNLYVICKFPQYE 250
                 56789*******************999************************9888899*****************************99987776555544044444444444444 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  16.1   0.00087       5.9     228     328 ..      24     119 ..       2     151 .. 0.58

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00087
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....................................................XXXXXXXXXXXHHH CS
  PF04652.11 228 aspseapssspgvpsfpspdeseasnkdsqlPsaPtyaqknssssqsvfPpsseeeetssssppsteapssppvqapsapakpslssakPtaqsassaqaq 328
                 +++ ++p ++p+v+ + s++  ++s++ ++ P++P  +  +sss   ++Pp   ++ ++ ++p+++ +p++++ q p++    ++  ++Pt+++++ a+ +
  MMETSP1325-20131115|5359_1  24 PPNPSNPFADPAVSLV-SAAPPSQSAPVVEYPPPPASQPPPSSSVSGTQPPWLAQSAQQEPPPSAYAQPQEAHSQPPQS----APFFSQPTNTNQPPAAPP 119
                 3333334444444444.33333444445555555555999999999999999996666666667777777776655553....233344444443332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       603  (0.0441047); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.38s 00:00:01.06 Elapsed: 00:00:00.57
# Mc/sec: 1235.36
//
Query:       MMETSP1325-20131115|5362_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.6e-31  106.3   0.1    1.5e-30  105.5   0.1    1.4  1  PF07047.7 Optic atrophy 3 protein (OPA3)
  ------ inclusion threshold ------
       0.05   13.3   0.7      0.074   12.7   0.5    1.2  1  PF12718.2 Tropomyosin like
      0.056   12.8   0.0      0.078   12.3   0.0    1.2  1  PF13942.1 YfhG lipoprotein
      0.057   13.2   0.5      0.081   12.7   0.4    1.1  1  PF13863.1 Domain of unknown function (DUF4200)


Domain annotation for each model (and alignments):
>> PF07047.7  Optic atrophy 3 protein (OPA3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5   0.1   4.3e-34   1.5e-30       1     131 [.      37     171 ..      37     181 .. 0.87

  Alignments for each domain:
  == domain 1    score: 105.5 bits;  conditional E-value: 4.3e-34
   PF07047.7   1 PlaKLgsLairqiSKpiAnriKkqAkehekFrkfiirlaqvyhaletriqrrllgkkqkevkirpLneekavelgadllgelfifsvaaalliyEyqRssrkeakKeeelkeelee....lkkrveeLeeeeekq 131
                 PlaKL++Lai+++SKp+A+ iK++  + ++ r+  i ++q++h++ t+++  + g+ +  ++++pL+e+ a + g++ ++e+fif va+++++ Ey R+s k++ Ke++++++ +e     ++++++Le +++++
  MMETSP1325-20131115|5362_1  37 PLAKLAALAIKTLSKPVAKGIKSRVITYPSLRQGCIHMGQMSHRIMTNVTILAAGHPRSRIQVKPLEESDALNRGTEFISEAFIFGVAGGTIVWEYARTSDKNKLKEARKAAQEQEyrdyTHAHIGQLEARVAEM 171
                 9*****************************************************************************************************666666555554440000555666676666655 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.5   2.2e-05     0.074      18      68 ..     134     185 ..     128     194 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.2e-05
   PF12718.2  18 eleeklKeleqenekkEeeiksLqk.KnqqlEeevekleeqlkeakekleek 68 
                    +k+K +e++++ +E+e+++ ++  + qlE  v ++ +ql+ +++kl e 
  MMETSP1325-20131115|5362_1 134 RTSDKNKLKEARKAAQEQEYRDYTHaHIGQLEARVAEMGAQLERVETKLGEL 185
                 5678999999999999999999987357899999999999999999988775 PP

>> PF13942.1  YfhG lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.3e-05     0.078     116     170 ..     145     199 ..     123     209 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.3e-05
   PF13942.1 116 eerarykrlqqesdskldalreqqakLqaeLetttrKLenLtdiERqLssRkqaq 170
                  + a+ ++ ++ + +++ +l  + a++ a+Le ++ KL +L   ER+L  R  ++
  MMETSP1325-20131115|5362_1 145 RKAAQEQEYRDYTHAHIGQLEARVAEMGAQLERVETKLGELAGRERKLGERAVDG 199
                 3334556677788999*********************************997655 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   2.4e-05     0.081      55     107 ..     133     185 ..     129     187 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.4e-05
   PF13863.1  55 lkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekleekleey 107
                  + +++ + +  +ka++e++ ++   ++i +l+a ++e+ a+ e++e kl e+
  MMETSP1325-20131115|5362_1 133 ARTSDKNKLKEARKAAQEQEYRDYTHAHIGQLEARVAEMGAQLERVETKLGEL 185
                 56678888888999***********************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       574  (0.0419836); expected 273.4 (0.02)
Passed bias filter:                      454  (0.0332066); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.49
# Mc/sec: 1046.57
//
Query:       MMETSP1325-20131115|5366_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00015   21.8   0.6    0.00031   20.8   0.4    1.6  1  PF00415.13 Regulator of chromosome condensation (RCC1) repeat
  ------ inclusion threshold ------
       0.12   11.8   2.3       0.16   11.5   0.5    1.9  2  PF13540.1  Regulator of chromosome condensation (RCC1) repeat


Domain annotation for each model (and alignments):
>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.4   4.5e-08   0.00031       1      50 [.      11      70 ..      11      71 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 4.5e-08
                TTEEEEE---------..--------S-EE..-GGG--.......----EEE-----EEE CS
  PF00415.13  1 dGrVysWGrndyGqLG.kggseenvlvPvk..veglsg.......vrvvqvacGgsHtla 50
                dG++++WG n + +LG + ++ + v +Pv+    g+ +         v +va G  +t++
  MMETSP1325-20131115|5366_1 11 DGELWTWGSNMNNCLGrQIDEMDVVYTPVPghCGGFGSivervgrGMVRSVAVGKEFTIV 70
                9***************98888888888865543333336666666888888888888875 PP

>> PF13540.1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.5   2.3e-05      0.16      16      26 ..      10      20 ..       2      24 .. 0.78
   2 ?   -1.2   0.0      0.23   1.6e+03       1      11 [.      58      68 ..      58      71 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.3e-05
                .---EEEE--- CS
   PF13540.1 16 sdGaVlcWGsN 26
                 dG++++WGsN
  MMETSP1325-20131115|5366_1 10 HDGELWTWGSN 20
                59********8 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.23
                --EEE-----E CS
   PF13540.1  1 VvsvsaGgyHt 11
                V+sv+ G  +t
  MMETSP1325-20131115|5366_1 58 VRSVAVGKEFT 68
                89***997666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1025  (0.0749707); expected 273.4 (0.02)
Passed bias filter:                      536  (0.0392042); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.42s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 847.94
//
Query:       MMETSP1325-20131115|5368_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-12   46.4   0.1    3.5e-12   46.3   0.1    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
    8.7e-12   44.1   0.1    4.8e-07   29.1   0.0    2.0  2  PF00023.25 Ankyrin repeat
    1.1e-09   38.0   0.8    3.5e-07   30.1   0.1    1.7  2  PF13857.1  Ankyrin repeats (many copies)
    7.3e-07   29.4   0.0    8.3e-07   29.2   0.0    1.2  1  PF13637.1  Ankyrin repeats (many copies)
    1.7e-06   27.6   0.0    0.00015   21.5   0.0    2.0  2  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.044   13.6   0.0      0.046   13.6   0.0    1.0  1  PF04519.8  Polymer-forming cytoskeletal
      0.052   11.1   0.1      0.052   11.1   0.1    1.0  1  PF07095.6  Intracellular growth attenuator protein IgaA


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.1   1.8e-15   3.5e-12      36      85 ..       2      51 .]       1      51 [] 0.97

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 1.8e-15
   PF12796.2 36 agnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadv 85
                 g++e++++L++ gadvn  d+e++t+L+ A+ +g++e+v+lL+++gad+
  MMETSP1325-20131115|5368_1  2 EGKVECLEVLVAGGADVNVADDEQWTALMNAADKGSAECVDLLIKAGADL 51
                699*********************************************95 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.9e-05     0.038      12      33 .]       2      23 ..       1      23 [. 0.91
   2 !   29.1   0.0   2.5e-10   4.8e-07       2      28 ..      25      51 .]      24      51 .] 0.95

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.9e-05
                TTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25 12 rgnlevvklLlsqGAdlnaqdd 33
                 g +e+++ L+  GAd+n+ dd
  MMETSP1325-20131115|5368_1  2 EGKVECLEVLVAGGADVNVADD 23
                5789***************997 PP

  == domain 2    score: 29.1 bits;  conditional E-value: 2.5e-10
                SCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdl 28
                 +T+L+ Aa +g++e+v lL+++GAdl
  MMETSP1325-20131115|5368_1 25 QWTALMNAADKGSAECVDLLIKAGADL 51
                59************************7 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00013      0.25      26      53 ..       2      29 ..       1      29 [. 0.93
   2 !   30.1   0.1   1.8e-10   3.5e-07       1      42 [.      11      51 .]      10      51 .] 0.87

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00013
   PF13857.1 26 ggalevvrlLlapgadlnlrdsdgltal 53
                 g +e+++ L+a gad n+ d + +tal
  MMETSP1325-20131115|5368_1  2 EGKVECLEVLVAGGADVNVADDEQWTAL 29
                5899*******************9**98 PP

  == domain 2    score: 30.1 bits;  conditional E-value: 1.8e-10
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadl 42
                L++ g++++ a de++ t+L++Aa +g++e+v+lL+++gadl
  MMETSP1325-20131115|5368_1 11 LVAGGADVNVADDEQW-TALMNAADKGSAECVDLLIKAGADL 51
                4555678888888888.**********************996 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   4.3e-10   8.3e-07      12      54 .]       3      45 ..       1      50 [. 0.97

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 4.3e-10
   PF13637.1 12 grlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                g +e+++ L++ g+d+n  d++++taL  Aa +g  e++ lL+
  MMETSP1325-20131115|5368_1  3 GKVECLEVLVAGGADVNVADDEQWTALMNAADKGSAECVDLLI 45
                899**************************************98 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.022        44      13      29 ..       3      19 ..       1      20 [. 0.87
   2 !   21.5   0.0   7.8e-08   0.00015       2      28 ..      25      51 .]      24      51 .] 0.95

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.022
   PF13606.1 13 grielveaLlengadin 29
                g++e +e L+  gad+n
  MMETSP1325-20131115|5368_1  3 GKVECLEVLVAGGADVN 19
                6788999*********9 PP

  == domain 2    score: 21.5 bits;  conditional E-value: 7.8e-08
   PF13606.1  2 GnTpLhlAasngrielveaLlengadi 28
                 +T+L+ Aa +g+ e v++L+++gad+
  MMETSP1325-20131115|5368_1 25 QWTALMNAADKGSAECVDLLIKAGADL 51
                59***********************96 PP

>> PF04519.8  Polymer-forming cytoskeletal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.4e-05     0.046      46      94 ..       2      50 ..       1      51 [] 0.96

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.4e-05
   PF04519.8 46 eGeikaeeviinGeveGnveakekleikstakveGdvkyksleieegaq 94
                eG++++ ev ++G  + nv  +e+++   +a  +G+ ++ +l i++ga 
  MMETSP1325-20131115|5368_1  2 EGKVECLEVLVAGGADVNVADDEQWTALMNAADKGSAECVDLLIKAGAD 50
                79*********************************************96 PP

>> PF07095.6  Intracellular growth attenuator protein IgaA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   2.7e-05     0.052     509     540 ..      16      47 ..       2      50 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.7e-05
   PF07095.6 509 aLvnLgnakdWetlvkraesGkLdGvnvlLrp 540
                 a vn+++ ++W++l++ a++G+ + v++l+++
  MMETSP1325-20131115|5368_1  16 ADVNVADDEQWTALMNAADKGSAECVDLLIKA 47 
                 67*************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.45
# Mc/sec: 271.59
//
Query:       MMETSP1325-20131115|5369_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       617  (0.0451287); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 258.81
//
Query:       MMETSP1325-20131115|5370_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-37  125.3  17.9    1.7e-23   82.3   4.2    2.1  2  PF01169.14 Uncharacterized protein family UPF0016
  ------ inclusion threshold ------
      0.094   12.0   9.9       0.27   10.6   0.3    2.1  2  PF04893.12 Yip1 domain
        0.5    9.6  14.6        4.6    6.4  10.1    2.0  1  PF01925.14 Sulfite exporter TauE/SafE
       0.53   10.0   7.9         12    5.7   5.5    2.4  1  PF13515.1  Fusaric acid resistance protein-like


Domain annotation for each model (and alignments):
>> PF01169.14  Uncharacterized protein family UPF0016
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   2.8   1.2e-16   4.1e-13      22      78 .]       2      56 ..       1      56 [. 0.97
   2 !   82.3   4.2   5.1e-27   1.7e-23       2      78 .]     121     195 ..     120     195 .. 0.97

  Alignments for each domain:
  == domain 1    score: 49.1 bits;  conditional E-value: 1.2e-16
  PF01169.14 22 llLAaryskkplaVflGatlAlllvtllavllGkllakllperllklvaallFlafG 78
                ++LA+r+s++  aV+lGa++Al+l+t+l++++G +l +llp+++++++aa+lFl+fG
  MMETSP1325-20131115|5370_1  2 AVLAMRHSRQ--AVWLGAVGALALMTVLSAAMGFALPNLLPKQYTHYAAAMLFLYFG 56
                69*****888..********************************************9 PP

  == domain 2    score: 82.3 bits;  conditional E-value: 5.1e-27
  PF01169.14   2 ltsflliflaElGDKTqlatllLAaryskkplaVflGatlAlllvtllavllGkllakllperllklvaallFlafG 78 
                 +++f+l+flaE+GD++q+at++LAa +  +p  V+lG +++++l+t++av++G++la++++e+++++v+++ Fl+f+
  MMETSP1325-20131115|5370_1 121 TQAFTLTFLAEWGDRSQIATIALAAAK--NPYGVTLGGIIGHALCTGIAVVGGRMLAARISEKTVATVGGITFLVFA 195
                 79***********************55..**********************************************97 PP

>> PF04893.12  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   2.5     0.003        10      18      75 ..       9      59 ..       2      60 .. 0.82
   2 ?   10.6   0.3   7.8e-05      0.27      29     116 ..     114     199 ..      84     201 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.003
  PF04893.12 18 ilrapdlyllllalltlllgllaslnlgqtlasgeevqgltlssllgaiiggllglll 75
                +++a++l+ + +++l+ +l+++++ +l++ l+ +          +++a++++++g++l
  MMETSP1325-20131115|5370_1  9 SRQAVWLGAVGALALMTVLSAAMGFALPNLLPKQ-------YTHYAAAMLFLYFGVIL 59
                4679********************9999999998.......77788888888888765 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 7.8e-05
  PF04893.12  29 lalltlllgllaslnlgqtlasg.eevqgltlssllga..iiggllglllgllllalllhliakllggkgsfkqtlsvvgyallPlilgal 116
                 +++ ++l  +++     ++la + ++ +++++++l++a  ++g  lg+++g +l +++  +++++l  ++s k + +v g ++l++++ ++
  MMETSP1325-20131115|5370_1 114 AIATGILTQAFTL----TFLA-EwGDRSQIATIALAAAknPYGVTLGGIIGHALCTGIAVVGGRMLAARISEKTVATVGGITFLVFAFYSF 199
                 4555555555555....2222.22344455555555558999*****************************99999999999999998876 PP

>> PF01925.14  Sulfite exporter TauE/SafE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  10.1    0.0013       4.6      51     232 ..       4     190 ..       1     201 [. 0.60

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0013
  PF01925.14  51 galahrrkgnvdw.rlllplllgallGallGallllllpskllkllfgvlllllallmllrkkraaek....................................grlrrpslilllllgglvvGflsgllgiggGvllvplllyllglplkkavatsllvflvislagllgyallgyvdwpllllvllllpgallGallGarlarrlsertlrrlfall 232
                  a++h r+    w  ++  l+l ++l a+ G  l +llp ++ + + ++l l++++ +l+ +k a +                                     +               +++G  +  +gi + +++   l++l  ++ +  +at +l+++  +  g++     g +    +l     +++++ G +l+ar++ +    t+ ++ ++ 
  MMETSP1325-20131115|5370_1   4 LAMRHSRQ--AVWlGAVGALALMTVLSAAMGFALPNLLPKQYTHYAAAMLFLYFGVILLRDAKDAGDGvsdelaeveeelihkkdegegdggdaesgnanagknA--------------SASGGPEAIATGILTQAFT---LTFLAEWGDRSQIATIALAAAK-NPYGVTL----GGIIGH-ALC---TGIAVVGGRMLAARISEK----TVATVGGIT 190
                 46777775..567479999**********************9999999999*****999966666666899999999*************988654322222220..............2224444445555555544...4444466666666666655433.3333333....111111.222...333333333333333333....333333333 PP

>> PF13515.1  Fusaric acid resistance protein-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.5    0.0035        12      25      78 ..       6     108 ..       1     203 [. 0.65

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0035
   PF13515.1  25 lsptigatatrav.qRllGTllGallallllallpgn.lalillvfllaflillf...............................................k 78 
                 ++ +  a++  av +  l T+l a+++++l  llp++  ++++++++l f  +l+                                                
  MMETSP1325-20131115|5370_1   6 MRHSRQAVWLGAVgALALMTVLSAAMGFALPNLLPKQyTHYAAAMLFLYFGVILLrdakdagdgvsdelaeveeelihkkdegegdggdaesgnanagknasA 108
                 55566666665551345789****************9445555555555555555666666666666666666666666666666666666666666655541 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       599  (0.0438122); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 997.67
//
Query:       MMETSP1325-20131115|5375_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.2   0.2       0.18   11.6   0.2    1.5  1  PF04726.8 Microvirus J protein


Domain annotation for each model (and alignments):
>> PF04726.8  Microvirus J protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   1.3e-05      0.18       8      17 ..      21      37 ..       9      41 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.3e-05
   PF04726.8  8 G.......GKrKGARLW 17
                G       +Kr G RLW
  MMETSP1325-20131115|5375_1 21 GrplgagdSKRRGPRLW 37
                355556679******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.25u 0.40s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 226.07
//
Query:       MMETSP1325-20131115|5374_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-07   28.9   1.1      0.028   14.3   0.1    2.1  2  PF13516.1  Leucine Rich repeat
    0.00039   19.9   0.0        1.2    9.3   0.0    2.2  2  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.019   14.5   0.1      0.038   13.6   0.1    1.5  1  PF13855.1  Leucine rich repeat
      0.034   13.6   0.0       0.17   11.4   0.0    1.8  1  PF12799.2  Leucine Rich repeats (2 copies)
      0.065   13.3   0.1         15    6.2   0.0    2.3  2  PF13504.1  Leucine rich repeat
      0.075   12.5   2.7       0.19   11.2   1.9    1.6  1  PF04528.8  Adenovirus early E4 34 kDa protein conserved region


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   1.2e-05     0.028       1      23 [.       8      31 ..       8      32 .. 0.91
   2 !   13.8   0.1   1.7e-05     0.039       1      23 [.      34      57 ..      34      58 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-05
   PF13516.1  1 lknLtsLdLsnN.qigdeGlsaLa 23
                + nLts++Ls + +++d  + aLa
  MMETSP1325-20131115|5374_1  8 CANLTSIHLSWCfNLTDAAVIALA 31
                78**********66*****99998 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 1.7e-05
   PF13516.1  1 lknLtsLdLsnN.qigdeGlsaLa 23
                + nLt++ Ls + +i+d  + aLa
  MMETSP1325-20131115|5374_1 34 CANLTTIVLSCCtNITDAAVIALA 57
                77********9846******9998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00053       1.2       1      14 [.      10      24 ..      10      34 .. 0.87
   2 !    8.9   0.0   0.00067       1.5       1      14 [.      36      50 ..      36      57 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00053
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL++++Ls + nlt+
  MMETSP1325-20131115|5374_1 10 NLTSIHLSWCfNLTD 24
                8************97 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00067
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL+++ Ls++ n+t+
  MMETSP1325-20131115|5374_1 36 NLTTIVLSCCtNITD 50
                8************96 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.7e-05     0.038       2      39 ..      10      50 ..       9      57 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.7e-05
   PF13855.1  2 nLkeLdLs..nNrlkvipdgaFk.glsnLkvLdLs.gnnlks 39
                nL++++Ls  +N l++ +  a+  ++ nL+++ Ls ++n++ 
  MMETSP1325-20131115|5374_1 10 NLTSIHLSwcFN-LTDAAVIALAtHCANLTTIVLScCTNITD 50
                99******6555.**9999888879**********8888875 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.3e-05      0.17       2      41 ..      10      53 ..       9      57 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.3e-05
   PF12799.2  2 nLevLdLsnN.nIkdlppela...nLpnLktLnLsnN.pisdlsa 41
                nL+++ Ls + n++d    +a    + nL+t+ Ls + +i+d  +
  MMETSP1325-20131115|5374_1 10 NLTSIHLSWCfNLTDAAV-IAlatHCANLTTIVLSCCtNITDAAV 53
                999999999999999666.44335899********9768999765 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0066        15       2      14 ..      10      23 ..       9      28 .. 0.88
   2 ?    5.2   0.0     0.014        33       2      14 ..      36      49 ..      35      54 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0066
   PF13504.1  2 nLkeLdLsgnr.Lt 14
                nL+  +Ls++  Lt
  MMETSP1325-20131115|5374_1 10 NLTSIHLSWCFnLT 23
                89********7688 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.014
   PF13504.1  2 nLkeLdLsgnr.Lt 14
                nL++  Ls++  +t
  MMETSP1325-20131115|5374_1 36 NLTTIVLSCCTnIT 49
                89*******97677 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.9   8.3e-05      0.19      70     106 ..      17      53 ..       2      59 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 8.3e-05
   PF04528.8  70 vvlkgllnnlvvlvCksCaelseisvrcCarrtrell 106
                  ++  l++  v+ + ++Ca+l+ i ++cC + t + +
  MMETSP1325-20131115|5374_1  17 SWCFNLTDAAVIALATHCANLTTIVLSCCTNITDAAV 53 
                 45667788899999***************98886655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.27u 0.43s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|5376_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        69  (0.00504681); expected 273.4 (0.02)
Passed bias filter:                       62  (0.00453482); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.42s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|5377_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       464  (0.033938); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.45s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|5380_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|5378_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 252.25
//
Query:       MMETSP1325-20131115|5384_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.4   0.4     0.0026   17.5   0.3    1.5  1  PF12907.2  Zinc-binding
     0.0085   16.7  12.3     0.0085   16.7   8.5    2.8  2  PF04419.9  4F5 protein family
  ------ inclusion threshold ------
      0.025   14.6   1.5      0.044   13.8   1.0    1.4  1  PF12874.2  Zinc-finger of C2H2 type
      0.067   13.3   0.0      0.099   12.7   0.0    1.3  1  PF12013.3  Protein of unknown function (DUF3505)
        9.1    6.6  17.4    1.1e+02    3.1  12.1    2.1  1  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF12907.2  Zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.3   9.6e-07    0.0026       2      30 ..      37      62 ..      36      67 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 9.6e-07
   PF12907.2  2 iiCkiCrqtFmcttseklLkeHaenKHpk 30
                i+C+iC+   +++ + k+Lk H ++ H +
  MMETSP1325-20131115|5384_1 37 IQCSICK---VSMPTCKQLKDHYDSRHSN 62
                8******...9999999**********87 PP

>> PF04419.9  4F5 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   8.5   3.1e-06    0.0085       1      37 [.       1      35 [.       1      36 [. 0.90
   2 ?   -4.6   4.7         5   1.4e+04      17      25 ..      93     101 ..      76     120 .] 0.66

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 3.1e-06
                ----GGGTTTSTTT---SS...-------S----TT- CS
   PF04419.9  1 MaRGnQReqaRERNaKKaakkkgkgaksqlkaaakal 37
                M+RG+ ++ a+++N+KK++   +k++  q  aa ka+
  MMETSP1325-20131115|5384_1  1 MVRGHAKADAQAKNQKKMEA--AKKNGTQRGAADKAM 35
                9*****************98..777889999999887 PP

  == domain 2    score: -4.6 bits;  conditional E-value: 5
                 -SS...--- CS
   PF04419.9  17 Kaakkkgkg 25 
                 K++kk+ ++
  MMETSP1325-20131115|5384_1  93 KKKKKAPAE 101
                 333222333 PP

>> PF12874.2  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.0   1.6e-05     0.044       2      23 ..      38      59 ..      37      60 .. 0.94

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.6e-05
                EETTTTEE-SSHHHHHHHH--- CS
   PF12874.2  2 yCelCnvtftSesqlksHlqGK 23
                 C++C+v++ + +qlk H+ ++
  MMETSP1325-20131115|5384_1 38 QCSICKVSMPTCKQLKDHYDSR 59
                6******************997 PP

>> PF12013.3  Protein of unknown function (DUF3505)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.6e-05     0.099       8      76 ..      33     104 ..      29     114 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.6e-05
   PF12013.3   8 elqviiCrqCkyavlp.sevetHLrkkhhelkqaatk.elaqai...eqwddlerdpeavslpsalsepipgLp 76 
                 +  vi C  Ck  +   ++++ H  ++h++l+  a+  ++       e+ +   +++++v  ++++++p +gL+
  MMETSP1325-20131115|5384_1  33 KAMVIQCSICKVSMPTcKQLKDHYDSRHSNLPFPAEYaAMLAPAgaaEEQE--PAQAKPVPKKKKKKAPAEGLD 104
                 567999*******99889*************76533212333222222222..455566666677777777775 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1  12.1      0.04   1.1e+02      24      81 ..       7     105 ..       2     114 .. 0.73

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.04
  PF00428.14  24 kllvkalegkdikeliangsakla.......................................aaaaaaaaaaaaaaaaaaaeeekkeeeee..Eeedd 81 
                 k++++a ++k+++++ +ng++ +a                                       aa  a+a aa++++ a+a+  +kk+++++  E  dd
  MMETSP1325-20131115|5384_1   7 KADAQAKNQKKMEAAKKNGTQRGAadkamviqcsickvsmptckqlkdhydsrhsnlpfpaeyAAMLAPAGAAEEQEPAQAKPVPKKKKKKApaEGLDD 105
                 667777777777777777777777777777777777777778888888888888888899988777888888888888888887777777766554454 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       736  (0.0538327); expected 273.4 (0.02)
Passed bias filter:                      524  (0.0383265); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|5381_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.51
# Mc/sec: 1606.97
//
Query:       MMETSP1325-20131115|5386_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 410.15
//
Query:       MMETSP1325-20131115|5387_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|5388_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0046   16.6   0.1     0.0073   15.9   0.1    1.4  1  PF06698.6  Protein of unknown function (DUF1192)
  ------ inclusion threshold ------
      0.041   13.8   0.1      0.046   13.6   0.1    1.3  1  PF09032.6  Siah interacting protein, N terminal
      0.082   11.7   0.0      0.082   11.7   0.0    1.1  1  PF01616.11 Orbivirus NS3


Domain annotation for each model (and alignments):
>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   1.6e-06    0.0073      31      53 ..      10      32 ..       1      34 [. 0.86

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.6e-06
   PF06698.6 31 alLqaEIaRleaalakkkasraA 53
                  L +EI+Rl+++l+kk+++ aA
  MMETSP1325-20131115|5388_1 10 DELNGEIDRLREELKKKNSGPAA 32
                579**************998777 PP

>> PF09032.6  Siah interacting protein, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1     1e-05     0.046      22      52 ..       3      33 ..       2      62 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1e-05
   PF09032.6 22 aeRkrVqdlLkqeirkieteieqkkqakaaq 52
                a+ krV+d L+ ei ++  e+++k+   aa 
  MMETSP1325-20131115|5388_1  3 AKIKRVRDELNGEIDRLREELKKKNSGPAAV 33
                5669********************9855554 PP

>> PF01616.11  Orbivirus NS3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.8e-05     0.082     148     183 ..       5      40 ..       1      64 [. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.8e-05
  PF01616.11 148 askiaeslkeeikrvkkeivKreaYisaartsadet 183
                 +++++++l+ ei+r++ e+ K+++  +a++  a+e+
  MMETSP1325-20131115|5388_1   5 IKRVRDELNGEIDRLREELKKKNSGPAAVTPGASES 40 
                 79*********************9877776655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       496  (0.0362785); expected 273.4 (0.02)
Passed bias filter:                      451  (0.0329871); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|5391_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.95
# Mc/sec: 254.77
//
Query:       MMETSP1325-20131115|5392_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.33s 00:00:00.61 Elapsed: 00:00:00.74
# Mc/sec: 123.06
//
Query:       MMETSP1325-20131115|5395_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.7   0.0      0.026   14.5   0.0    1.1  1  PF08748.6 Domain of unknown function (DUF1789)


Domain annotation for each model (and alignments):
>> PF08748.6  Domain of unknown function (DUF1789)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.9e-06     0.026      75     127 ..      20      72 ..      14      73 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.9e-06
   PF08748.6  75 aldaelikevatGWdldeefneenielLvekfpgaleailaaYdeallqaRlg 127
                 ++dael++e+ +  +  ++ ++e++ +Lv+k+ g l+ +l+  ++++++a+ +
  MMETSP1325-20131115|5395_1  20 KTDAELVQEIYEFYKKHAPAKVESVPKLVDKYKGQLSRLLERLHQKYAGAKTK 72 
                 5799*******************************************999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 403.83
//
Query:       MMETSP1325-20131115|5394_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   14.7   0.1      0.013   14.7   0.1    1.0  1  PF13567.1 Domain of unknown function (DUF4131)
        0.1   12.2   0.0       0.13   11.8   0.0    1.2  1  PF14155.1 Domain of unknown function (DUF4307)
       0.27   11.2   1.3       0.38   10.7   0.5    1.5  2  PF10829.3 Protein of unknown function (DUF2554)


Domain annotation for each model (and alignments):
>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   2.9e-06     0.013      21      68 ..       3      50 ..       1      66 [] 0.74

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.9e-06
   PF13567.1 21 lllalllllllflkrrkrrrlllllglllllaglylllrapqpssndl 68
                ++lal+l l+l + + +r+   ++++l+++l+++y+ +++ + +++d 
  MMETSP1325-20131115|5394_1  3 VILALVLQLALPKTHASRSAVVTIVLLACALFFGYCIYHQCCSEETDG 50
                667777777777777889999999999999999999999988877665 PP

>> PF14155.1  Domain of unknown function (DUF4307)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.9e-05      0.13       6      43 ..      20      57 ..      15      62 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.9e-05
   PF14155.1  6 llavgavllvvalvlvawvayqqlagqevsaevigfev 43
                + av++++l+++++++++  y+q  ++e ++ ++++++
  MMETSP1325-20131115|5394_1 20 RSAVVTIVLLACALFFGYCIYHQCCSEETDGGDAQYHT 57
                678999***********************999999976 PP

>> PF10829.3  Protein of unknown function (DUF2554)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.5   8.4e-05      0.38       5      21 ..      23      39 ..      20      49 .. 0.84
   2 ?   -1.5   0.0      0.55   2.5e+03      42      57 ..      47      62 ..      39      65 .. 0.50

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 8.4e-05
   PF10829.3  5 ilsvvlltcalfsGqll 21
                ++++vll+calf G  +
  MMETSP1325-20131115|5394_1 23 VVTIVLLACALFFGYCI 39
                678*********99766 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.55
   PF10829.3 42 eadsdelravaeesae 57
                e+d  + +  +e +ae
  MMETSP1325-20131115|5394_1 47 ETDGGDAQYHTELTAE 62
                4444444445555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       608  (0.0444705); expected 273.4 (0.02)
Passed bias filter:                      520  (0.0380339); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.80
# Mc/sec: 197.70
//
Query:       MMETSP1325-20131115|5385_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 150.88
//
Query:       MMETSP1325-20131115|5397_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00024   20.6   0.8    0.00041   19.9   0.6    1.3  1  PF07885.11 Ion channel
  ------ inclusion threshold ------
      0.022   14.0   0.1      0.025   13.8   0.1    1.1  1  PF01925.14 Sulfite exporter TauE/SafE
      0.059   12.5   0.9      0.078   12.1   0.6    1.1  1  PF00520.26 Ion transport protein
       0.43    9.3   3.1       0.12   11.2   0.2    1.4  1  PF12291.3  Protein of unknown function (DUF3623)


Domain annotation for each model (and alignments):
>> PF07885.11  Ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.6   1.2e-07   0.00041      20      74 ..      13      71 ..       2      75 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.2e-07
  PF07885.11 20 wegwsfldalYfsfvtltTi....GYGdivPgtdagrlfaivyillGlalfalllavlg 74
                 egw + +++Y  +  +t i    GY d  +++ +gr+f++v+++  la++a+l+ v++
  MMETSP1325-20131115|5397_1 13 IEGWEWDQSMYLIMGEITQIdvdmGYDDAEADSFWGRIFVCVIGIWCLAFLAMLIGVMA 71
                5788**************988888*******************************9986 PP

>> PF01925.14  Sulfite exporter TauE/SafE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   7.3e-06     0.025     123     162 ..      47      86 ..       4      96 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 7.3e-06
  PF01925.14 123 pslilllllgglvvGflsgllgiggGvllvplllyllglp 162
                 +++i++ ++g+ ++ fl+ l+g+++G+ll+p+  +++  p
  MMETSP1325-20131115|5397_1  47 WGRIFVCVIGIWCLAFLAMLIGVMAGPLLTPVQEMMMMTP 86 
                 5566677889999*******************98887666 PP

>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.6   2.3e-05     0.078     161     199 .]      18      70 ..       8      70 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.3e-05
                 XXXXXXX....................XXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  PF00520.26 161 wgdlmyatl...............ragskigyiyfvifiilgsflllnlliavi 199
                 w ++my ++               +a s++g i+  ++i +  + +l++li+v+
  MMETSP1325-20131115|5397_1  18 WDQSMYLIMgeitqidvdmgyddaEADSFWGRIFV-CVIGIWCLAFLAMLIGVM 70 
                 777777777777777777777777***********.99999999*********8 PP

>> PF12291.3  Protein of unknown function (DUF3623)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   3.4e-05      0.12      68      98 ..      51      81 ..      21      86 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.4e-05
   PF12291.3 68 FlsallvWgwiElafltgvitGprkeacpeg 98
                F++++ +W    la l+gv++Gp  ++ +e 
  MMETSP1325-20131115|5397_1 51 FVCVIGIWCLAFLAMLIGVMAGPLLTPVQEM 81
                9**********************98888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 774.99
//
Query:       MMETSP1325-20131115|5399_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 1224.80
//
Query:       MMETSP1325-20131115|5402_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.44
# Mc/sec: 484.72
//
Query:       MMETSP1325-20131115|5400_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-05   21.9   2.1    0.00015   20.4   1.5    1.9  1  PF04791.11 LMBR1-like membrane protein
  ------ inclusion threshold ------
        2.6    8.3   5.1       0.49   10.6   0.6    1.9  3  PF11024.3  Dispersed gene family protein 1 of Trypanosoma cruzi region 4


Domain annotation for each model (and alignments):
>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   1.5   2.1e-08   0.00015     144     214 ..      78     151 ..       1     214 [. 0.68

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 2.1e-08
  PF04791.11 144 ldnsesllslwevflplvyScvsflGllLlliltgyGlaelfsslwkllvr...eekaekledekeeaessvdd 214
                 +  ++s+++l   f  ++ +++ flG + +++++g+G+a ++  l+++ +        e+ + ek   +++  +
  MMETSP1325-20131115|5400_1  78 VSSKNSTIDLPCSFAIYILALTGFLGWFGFVVFGGVGIAAMPITLINNYIDrpkHMTREEVAGEKLRIQEKTAE 151
                 5558899999999************************************9944433333333333333333333 PP

>> PF11024.3  Dispersed gene family protein 1 of Trypanosoma cruzi region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.6   7.2e-05      0.49       7      47 ..      30      71 ..      29      86 .. 0.73
   2 ?   -3.3   0.1       1.6   1.1e+04      69      74 ..     163     168 ..     138     175 .. 0.70
   3 ?   -1.8   0.1      0.55   3.7e+03      41      64 ..     180     203 ..     157     209 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 7.2e-05
   PF11024.3  7 tpamPlLshtatLTetRsltptwtPsl.stthysptqysete 47
                t+++P   +tatL e+  +t   tPs+ s++ y + + ++++
  MMETSP1325-20131115|5400_1 30 TSEIPVTEYTATLSEMSDVTYVVTPSSvSAKDYYSVELTQSD 71
                8899*********************87566666554444433 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 1.6
   PF11024.3  69 stlwws 74 
                  ++wws
  MMETSP1325-20131115|5400_1 163 RAAWWS 168
                 467777 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 0.55
   PF11024.3  41 tqysetetlqvtetvalspTrtpt 64 
                  ++  t+  q+ + v ++ T+ +t
  MMETSP1325-20131115|5400_1 180 KREDRTNVNQLKQMVYILETELDT 203
                 345667777777777777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       790  (0.0577823); expected 273.4 (0.02)
Passed bias filter:                      529  (0.0386922); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.41s 00:00:01.02 Elapsed: 00:00:00.59
# Mc/sec: 954.48
//
Query:       MMETSP1325-20131115|5398_1  [L=465]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.38s 00:00:01.14 Elapsed: 00:00:00.73
# Mc/sec: 1526.45
//
Query:       MMETSP1325-20131115|5406_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-13   48.7   0.0    4.6e-13   48.5   0.0    1.0  1  PF04321.12 RmlD substrate binding domain
    5.2e-07   29.2   0.0    7.2e-07   28.7   0.0    1.2  1  PF01370.16 NAD dependent epimerase/dehydratase family
    6.5e-05   21.8   0.0    7.9e-05   21.5   0.0    1.1  1  PF02719.10 Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.017   13.9   0.1       0.76    8.5   0.0    2.0  2  PF07993.7  Male sterility protein
      0.086   12.2   0.0          5    6.6   0.0    2.5  3  PF13986.1  Domain of unknown function (DUF4224)


Domain annotation for each model (and alignments):
>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   0.0   1.7e-16   4.6e-13       2     110 ..      11     119 ..      10     123 .. 0.91

  Alignments for each domain:
  == domain 1    score: 48.5 bits;  conditional E-value: 1.7e-16
                 EEEEE--------HHHHHH----EEEEE--TTT--TT-HHHHHHHHHHH--SEEEE-----...-HHHHHH-HHHHHHHHT---HHHHHHHHH---EEEEEEEGGG-----S CS
  PF04321.12   2 rilvtGanGqlGteLaralkeegvevvaldreeldltdpeavaalvkeakpdvvvnaAAyt...avdkaEseeeeayavnaegpenlAeaaaavgallihiSTdyVFdGekk 110
                 +++++G+nG lG  L++ lk+ + e+v  +++    +++e++aa ++e+kp+ v+na+  t   +vd +E++++ea + n+ g++n+A++++++g++   + T  +F+ +++
  MMETSP1325-20131115|5406_1  11 KWMLIGKNGWLGGMLIELLKAGNKEYVLANSR---TQNRESIAAELDEHKPTHVLNASGQTgrpNVDWCETHQAEALRSNVIGAMNVADLCEERGTHHTLYATGCIFEYDAA 119
                 799*****************998888877555...5789*******************9997778**********************************999*999986665 PP

>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   2.6e-10   7.2e-07       3     121 ..      14     115 ..      12     123 .. 0.79

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 2.6e-10
                 EE--------HHHHHHHHH-TEEEEESSCSTCCCCCCHHHTBEEEB--TT-HHHHHHHHHHHT.SEEEE--S---..HHHCC.CSHHHHHHHHT---HHHHHHHHHHTT.EEEEEEEGGG-- CS
  PF01370.16   3 VtGatGfiGsalveallekgyevvnlirrtrseslatvrirvelveldltdkdalerlfaeeqpdaVihlAaesg..vdass.edpadfieanvegtlnlleaarkagvkrflfasSsevyg 121
                 ++G +G++G  l+e l++ ++e  +l++++ +                  +++++++ ++e++p++V+++ +++g  +  +  +++a+ +++nv+g+ n+ + + ++g+   l+a + ++++
  MMETSP1325-20131115|5406_1  14 LIGKNGWLGGMLIELLKAGNKE-YVLANSRTQ------------------NRESIAAELDEHKPTHVLNASGQTGrpNVDWCeTHQAEALRSNVIGAMNVADLCEERGTHHTLYA-TGCIFE 115
                 6788899999999888887777.444444443..................599**********************975556689*************************766665.455554 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   2.9e-08   7.9e-05      63     122 ..      43     105 ..      25     110 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 2.9e-08
  PF02719.10  63 vrdkerleealeelkvdvvfhaAAlK...hVPlveenpleavktNvlgtenvieaaieagvek 122
                  +++e+++  l+e+k+  v++a       +V  +e++ +ea++ Nv+g++nv++ + e g ++
  MMETSP1325-20131115|5406_1  43 TQNRESIAAELDEHKPTHVLNASGQTgrpNVDWCETHQAEALRSNVIGAMNVADLCEERGTHH 105
                 5789999***************87642338999************************998776 PP

>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0    0.0077        21       3      49 ..      16      57 ..      14      71 .. 0.65
   2 ?    8.5   0.0   0.00028      0.76     103     129 ..      79     105 ..      71     119 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.0077
   PF07993.7  3 GaTGfLGkvllekllrtqpevkiyllvRaksgesaleRleeelekke 49
                G  G LG +l+e l   ++e  + +  R ++     e + +el++++
  MMETSP1325-20131115|5406_1 16 GKNGWLGGMLIELLKAGNKE-YVLANSRTQNR----ESIAAELDEHK 57
                889********977777766.44444455444....44444544444 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00028
   PF07993.7 103 pykellrtNvlGtrevlelakklkklv 129
                 +  e+lr Nv G+++v +l++++   +
  MMETSP1325-20131115|5406_1  79 HQAEALRSNVIGAMNVADLCEERGTHH 105
                 34569****************876654 PP

>> PF13986.1  Domain of unknown function (DUF4224)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0018         5      14      38 ..      43      67 ..      41      75 .. 0.89
   2 ?    3.4   0.0     0.018        50      17      29 ..      77      89 ..      68      96 .. 0.84
   3 ?   -3.2   0.0       2.2   5.9e+03      27      38 ..     101     112 ..      99     113 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0018
   PF13986.1 14 ykrrskQaawLkrmGIpfvvnadGr 38
                +++r   aa+L++++  +v+na G 
  MMETSP1325-20131115|5406_1 43 TQNRESIAAELDEHKPTHVLNASGQ 67
                6789999***************995 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.018
   PF13986.1 17 rskQaawLkrmGI 29
                +++Qa++L+++ I
  MMETSP1325-20131115|5406_1 77 ETHQAEALRSNVI 89
                689******9855 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 2.2
   PF13986.1  27 mGIpfvvnadGr 38 
                 +G ++ + a G+
  MMETSP1325-20131115|5406_1 101 RGTHHTLYATGC 112
                 677888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 621.10
//
Query:       MMETSP1325-20131115|5405_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-12   45.4   0.0    6.9e-12   45.1   0.0    1.1  1  PF00685.22 Sulfotransferase domain


Domain annotation for each model (and alignments):
>> PF00685.22  Sulfotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.0   5.1e-16   6.9e-12     173     256 ..       1      87 [.       1      88 [. 0.92

  Alignments for each domain:
  == domain 1    score: 45.1 bits;  conditional E-value: 5.1e-16
                 EEHHHHHH-HHHHHHHHHHHTT--........HHHHHHHTCHHHHHC-CCCSSTCCHS-SSEE---TTGGGT--HHHHHHHHHHHHHHHTTS CS
  PF00685.22 173 lrYEdlkkdpakeikeiaeFlGip........lekivkhlsfenmksnpvsnksklsekffrkgqvgdWkneltveqaekldeifqeklkdt 256
                 l+YE++ +dpa++i +ia+F+G++        ++k v++++  +mk++  +         +r+g++g+W+++++ e ++ +de +++++++ 
  MMETSP1325-20131115|5405_1   1 LTYEEMVADPAGNICKIAKFIGMEdlepdselIQKTVEKSTVASMKASSGVY-----AGNVRQGGIGNWRKHFSDEDSALFDEEYRKQMEGV 87 
                 68***********************999999999999999999999888888.....799*****************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 840.90
//
Query:       MMETSP1325-20131115|5407_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   56.6   0.0    1.5e-15   56.5   0.0    1.0  1  PF00224.16 Pyruvate kinase, barrel domain
  ------ inclusion threshold ------
      0.015   14.1   0.0      0.016   14.0   0.0    1.1  1  PF00478.20 IMP dehydrogenase / GMP reductase domain


Domain annotation for each model (and alignments):
>> PF00224.16  Pyruvate kinase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.5   0.0   2.3e-19   1.5e-15       2      67 ..      32      97 ..      31      98 .] 0.97

  Alignments for each domain:
  == domain 1    score: 56.5 bits;  conditional E-value: 2.3e-19
                --SEEEEEE--TTTSHHHHHHHHH----EEEEETT---HHHHHHHHHHHHHHHHTTTTS-EEEEE- CS
  PF00224.16  2 rrtkivctlGPasesvekleklieaGlnvvRlnfshGsheehkeridnvreaeeklgkkvaillDt 67
                ++tk ++t+GPas +  +lekl  aG++v+RlnfshG hee++e ++ +r+ e+++++ ++il D+
  MMETSP1325-20131115|5407_1 32 KSTKQLATVGPASCTYAMLEKLFLAGVDVFRLNFSHGAHEEKAELVNLIRQLEANYNHPIGILADL 97
                78999**********************************************************996 PP

>> PF00478.20  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.3e-06     0.016      94     146 ..      31      83 ..       7      92 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.3e-06
                 TS-B--EEEE-SSTTHHHHHHHHHH----EEEE------BHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00478.20  94 ekrllvgaavgtreedlerveaLveagvdviviDsahghsesviemikkikek 146
                 +k +   a vg+ + ++  +e+L  agvdv  +  +hg  e+  e ++ i++ 
  MMETSP1325-20131115|5407_1  31 TKSTKQLATVGPASCTYAMLEKLFLAGVDVFRLNFSHGAHEEKAELVNLIRQL 83 
                 456667799*******************************9999999998874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 489.26
//
Query:       MMETSP1325-20131115|5403_1  [L=365]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-16   60.3   0.3    3.3e-16   59.5   0.2    1.4  1  PF00106.20 short chain dehydrogenase
    8.3e-08   31.9   0.2    1.5e-07   31.1   0.1    1.4  1  PF08659.5  KR domain
    2.3e-06   27.4   0.0    3.7e-06   26.8   0.0    1.3  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase
    0.00097   19.0   0.4      0.002   18.0   0.3    1.6  1  PF13460.1  NADH(P)-binding


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.2   9.8e-20   3.3e-16       1     138 [.      44     188 ..      44     193 .. 0.86

  Alignments for each domain:
  == domain 1    score: 59.5 bits;  conditional E-value: 9.8e-20
                 -EEEE---------HHHHHHHHHSSEEEEEEESS.SHHHHHHHHHHHHH--.-EEEEEE--TTSHHHHHHHHHHHHHH----SEEEEE---TT-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH........HH---EEEEEECHH CS
  PF00106.20   1 gtvliTGGlgglGlalArwLveegarhlvlvsrredapgaaeliaelealg.aevtvvacDvadrdalaallaeirkalgpldgvvhnagvlddgpleeltperlervlapkvtgawllheltld........adlgafvlfSSvag 138
                 +t+ +TG+++g G  lAr+ +++gar+++l   +++a++a + +a+l      ++  +acD+++ ++++ + ++ir+ +g+ld++  nagv+   + +  tp+ ++  ++p+  + +ll+ ++ d        ++ +++v+ SS+a 
  MMETSP1325-20131115|5403_1  44 KTIAVTGCTSGTGWVLARTAAARGARVILLNRPSPRADAALAKLAALPDVReDSIISIACDLSSFQSVRDAANAIRELGGELDVLCLNAGVMG--LTDGATPDGYDVQMQPNHLSQFLLTSCLWDlleataekHGESRVVTHSSGAR 188
                 7999*******************99888887777777777777788885444999************************************99..668899***********88888888888887777665555999999999885 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.1   4.5e-11   1.5e-07       3      93 ..      46     136 ..      45     188 .. 0.80

  Alignments for each domain:
  == domain 1    score: 31.1 bits;  conditional E-value: 4.5e-11
                 EEE----SHHHHHHHHHHHH-----EEEEE--.---------HHHHHH.----EEEEE--TTSHHHHHHHH----TTS.---EEEE------ CS
   PF08659.5   3 yLvtGGlgglGlelarwLaergarhlvllsrsaapdeeaeallaelea.lgaevtvvaaDvadrdavealleeveaeepplrGvvhaAgvlr 93 
                   vtG + g G +lar  a+rgar ++l   s + +++a a+la+l + ++ ++  +a+D+++ ++v+ + +++++ +++l+     Agv+ 
  MMETSP1325-20131115|5403_1  46 IAVTGCTSGTGWVLARTAAARGARVILLNRPS-PRADAALAKLAALPDvREDSIISIACDLSSFQSVRDAANAIRELGGELDVLCLNAGVMG 136
                 569********************999888888.7777777889999884588*****************************99999999864 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   1.1e-09   3.7e-06       6      85 ..      53     136 ..      50     191 .. 0.77

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 1.1e-09
                 -----HHHHHHHH---EEEE---HH---------------..--.-..----TT-SGGHHHHHHHHHHH.---BSEEEEEEE--- CS
   PF13561.1   6 nsigwaiakalaeaGaevilttwvpaklkkkvqelakelp..ad.v..vplDvtseedvselaekvkedlggkiDilvhsiansp 85 
                 ++ gw  a+ +a+ Ga+vil +++  + + ++++la+  +  +d +  + +D++s ++v   a++++e   g++D+l   ++++ 
  MMETSP1325-20131115|5403_1  53 SGTGWVLARTAAARGARVILLNRPSPRADAALAKLAALPDvrEDsIisIACDLSSFQSVRDAANAIRELG-GELDVLCLNAGVMG 136
                 799**********************999999999998666543365589********************7.****9976666554 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.3   5.9e-07     0.002       1      69 [.      46     116 ..      46     190 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 5.9e-07
   PF13460.1   1 IaviGAtGktGrrivkellarghevtalvRnpsklpe.ssgvtivkkDlfdl..edlaealagvdvvvdafg 69 
                 Iav+G+t+ tG+ +++ ++arg  v +l R   ++++ + ++ +   D+ +    ++a +l++++ v da++
  MMETSP1325-20131115|5403_1  46 IAVTGCTSGTGWVLARTAAARGARVILLNRPSPRADAaLAKL-AALPDVREDsiISIACDLSSFQSVRDAAN 116
                 9*****************************999988753333.33344433323446666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.60
# Mc/sec: 1457.78
//
Query:       MMETSP1325-20131115|5408_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|5409_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|5411_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   19.0   0.0     0.0013   18.8   0.0    1.2  1  PF03171.15 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF03171.15  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   9.7e-08    0.0013      51      87 ..      13      56 ..       1      74 [. 0.78

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 9.7e-08
                CECTSTT.EEEEEEEEHHCCCE---GTT-EEEE----......C CS
  PF03171.15 51 dvppdpv.allvnfgdvllvltngryksvlHrvlpnt......r 87
                  ++dp+  +lv +g++ +vlt+g yk+  Hrvl  +      +
  MMETSP1325-20131115|5411_1 13 EENCDPStDVLVLCGEFSQVLTGGVYKAAVHRVLRPEstavgdG 56
                567788889************************99876666651 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|5412_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-20   72.0   0.0    4.7e-20   71.6   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    1.5e-17   63.4   0.0    2.1e-17   63.0   0.0    1.1  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   0.0   6.9e-24   4.7e-20     165     259 .]      20     118 ..      10     118 .. 0.92

  Alignments for each domain:
  == domain 1    score: 71.6 bits;  conditional E-value: 6.9e-24
                 -EECGGGS-HHHHHHSE....EEHHHHHHH---HHHHHHTTT-GTTTTS.HHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH CS
  PF07714.12 165 aklpvkWmapEslkekk....ftsksDvWsfGvllwEiftlgespypgl.sneevlellkegkrlekpekcpeelyelmkqCweeepeeRptfkelvekl 259
                 +   v W apE++  ++    ++ k Dv+sfG++l+E+++  + p+++l s  ++++l+ +gkr e+  ++p++  elm++Cw+++p +Rp+f+++v+ l
  MMETSP1325-20131115|5412_1  20 NVGTVAWAAPEVFAGERaytsYSLKVDVYSFGMVLYELME-RKPPFNHLtSRFDIMDLVAQGKRPETTVDIPDDYRELMEKCWQQDPMRRPDFQTIVSSL 118
                 556799*******98888888999****************.569***998999*******************************************9876 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   0.0     3e-21   2.1e-17     153     256 ..      15     116 ..       7     118 .. 0.86

  Alignments for each domain:
  == domain 1    score: 63.0 bits;  conditional E-value: 3e-21
                 S-CSS----GGGS-HHHHH...TSHHHHHHHHHHHHHHHHHHHHC---TTTST.HHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20 153 eklttlvgtreYmAPEvll...kakeytkkvDvWslGvilyelltgklpfsge.seedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilk 256
                  +lt+ vgt  ++APEv       + y+ kvDv+s+G++lyel+++k+pf++  s+ d + l+++ +++++  d+p      ++ ++l++k++++dp +R+ ++ i++
  MMETSP1325-20131115|5412_1  15 LMLTSNVGTVAWAAPEVFAgerAYTSYSLKVDVYSFGMVLYELMERKPPFNHLtSRFDIMDLVAQGKRPETTVDIP------DDYRELMEKCWQQDPMRRPDFQTIVS 116
                 57899************884446677888**********************9856677788888888888888877......7799****************999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1336.43
//
Query:       MMETSP1325-20131115|5416_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       531  (0.0388385); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.53
# Mc/sec: 655.61
//
Query:       MMETSP1325-20131115|5417_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|5419_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   11.6   2.6       0.11   11.4   1.8    1.1  1  PF04817.7 Umbravirus long distance movement (LDM) family


Domain annotation for each model (and alignments):
>> PF04817.7  Umbravirus long distance movement (LDM) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.8   8.2e-06      0.11      23      83 ..       9      71 ..       3      81 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8.2e-06
   PF04817.7 23 svrrGdrertpgnkpr.sshprsRkpkGgvHPattsk.dskkairgtkavteHkeHrgsvvrr 83
                ++rr ++ r++  +p  s  + sR+++G  HP++++  ++      t+   +       vvrr
  MMETSP1325-20131115|5419_1  9 ALRRAKHLRSRHSRPPgSGGAASRERAGTAHPTAAPGlEPSXYATATQTFRTFTTTASGVVRR 71
                5789999999998875155789***********999525666666666666666655555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 459.30
//
Query:       MMETSP1325-20131115|5420_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 364.06
//
Query:       MMETSP1325-20131115|5418_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 739.93
//
Query:       MMETSP1325-20131115|5421_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0085   15.7  15.8      0.093   12.3   9.8    2.3  2  PF04360.7 Serglycin


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.0   0.0    0.0051        69      79     107 ..      19      47 ..       6      54 .. 0.81
   2 !   12.3   9.8   6.8e-06     0.093      91     109 ..      95     113 ..      68     123 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.0051
   PF04360.7  79 kdlnevfplsedysgsgsgsGsGsGsgsG 107
                 ++l++   + ed+   g+ sG G G   G
  MMETSP1325-20131115|5421_1  19 QELDKKAKMEEDMDMNGFNSGGGGGGRLG 47 
                 556666678999999******99987655 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 6.8e-06
   PF04360.7  91 ysgsgsgsGsGsGsgsGsG 109
                 +sgsgsgsGsGsGsgsGsG
  MMETSP1325-20131115|5421_1  95 FSGSGSGSGSGSGSGSGSG 113
                 4999999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.62
# Mc/sec: 552.71
//
Query:       MMETSP1325-20131115|5424_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-13   50.9   0.0      2e-13   50.7   0.0    1.0  1  PF05025.8 RbsD / FucU transport protein family


Domain annotation for each model (and alignments):
>> PF05025.8  RbsD / FucU transport protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   1.5e-17     2e-13      61     141 ..       2      88 ..       1      89 [. 0.87

  Alignments for each domain:
  == domain 1    score: 50.7 bits;  conditional E-value: 1.5e-17
                 HHHHS--SEEEEETHHHHH.......THHHHHHHHHHT........SSSEEEEE-HHHHHHHGGG-SEEEE----STT--EEEE---- CS
   PF05025.8  61 vlselpvekavlaeeikee.......npelleelekeleelkaeegseveieavereafkerakkakavirTGEtrpYaNiiLkkGVi 141
                 + s+lp++ +v ++  ++        +pe   e+ ++ +++ a++ +++++++++r af+++a+ka+av++  E+rpY++++L+kGV+
  MMETSP1325-20131115|5424_1   2 IGSVLPIDLFVEEPMRNMCpspglelPPEG-AEVLELSKSAMAAHCKTAAFTPLDRMAFYDEARKAFAVVQCAERRPYGCFLLQKGVV 88 
                 56899********99999998888855555.8888888888667777778*************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 576.15
//
Query:       MMETSP1325-20131115|5426_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-30  105.6   0.0    1.9e-30  105.5   0.0    1.0  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5   0.0   1.4e-34   1.9e-30      73     159 ..       2      80 ..       1      81 [] 0.91

  Alignments for each domain:
  == domain 1    score: 105.5 bits;  conditional E-value: 1.4e-34
                 ---EEEEEE--TT---HHHHH-.TTTTC---HHHHHHHHHHHHHCCTTTHTEEEEEEEEEEEEETTEEEETTSTTTTS-SS.BEEEE CS
  PF00225.18  73 GynvtifaYGqtgsGKTytmeGkeeeeekGiipraleelFeeieeekeekekefsvkvsylEiYnekiyDLLesekekkkkklkire 159
                 Gynv+ifaYGqtgsGKT+tmeG   ++++G+  ra+ elF +iee+++    +f++++s+lEiYne+i DLL+++    +kkl+ir+
  MMETSP1325-20131115|5426_1   2 GYNVCIFAYGQTGSGKTHTMEGP--DADPGVNRRAITELFAQIEERSSM--FDFELEMSMLEIYNEEIKDLLDPS----DKKLEIRK 80 
                 9*********************5..899***************998876..9*********************97....33477775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 396.13
//
Query:       MMETSP1325-20131115|5427_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-22   78.0   0.1      1e-21   77.0   0.1    1.5  1  PF00227.21 Proteasome subunit
  ------ inclusion threshold ------
      0.019   14.9   2.1      0.067   13.1   0.2    2.5  3  PF00288.21 GHMP kinases N terminal domain


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.0   0.1   1.5e-25     1e-21       3     189 ..      37     212 ..      36     213 .. 0.89

  Alignments for each domain:
  == domain 1    score: 77.0 bits;  conditional E-value: 1.5e-25
                 C--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEES......SSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEE CS
  PF00227.21   3 kGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieek......navaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknvevav 189
                 +Gtt+++i+ ++  vl+ d ++++gs +++++ ++K+++++d ++++faG++aDa+tl er++++++++        ++         ++ +++++++r + +++ l a +   +    ++i+ +G+v+e+k      +++ +Gsg  +a ++ ++l   d+   +a+++a+k+++ a++ + +++ n+ +++
  MMETSP1325-20131115|5427_1  37 HGTTILCIRKEGKTVLIGDGQVSQGSIVVKPN-AKKVRRLQDGVLAGFAGSTADAFTLLERLEERLEEHP------GQLT--------RACVDLAKAWRTDKYLRRLEAVLLVCDSKVAFEITGNGDVLEPKeteggvSVMGVGSGGSYALAAARALA--DMPGVDAETIARKSMEVAADMCVYTNHNFVIET 212
                 8***************************9999.7***********************************5......7777........8888889999999988888888888888899***********9965542224556688888888888888..*****************************9986 PP

>> PF00288.21  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       0.3   2.1e+03      17      32 ..       3      18 ..       2      39 .. 0.66
   2 ?   -0.3   0.0      0.15     1e+03      12      25 ..      81      94 ..      78     117 .. 0.82
   3 ?   13.1   0.2   9.8e-06     0.067      13      45 ..     163     193 ..     158     208 .. 0.76

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.3
                HHHHHHHHHHHHHHHT CS
  PF00288.21 17 SAalavalaaAllaly 32
                SAa ++ l + +++++
  MMETSP1325-20131115|5427_1  3 SAATTTMLGRLAARHL 18
                7777777777777766 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.15
                ----HHHHHHHHHH CS
  PF00288.21 12 aGLGSSAalavala 25
                aG ++S+a+a  l+
  MMETSP1325-20131115|5427_1 81 AGFAGSTADAFTLL 94
                79999999998876 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 9.8e-06
                 ---HHHHHHHHHHHHHHHHTT-SSHHHHHHHHH CS
  PF00288.21  13 GLGSSAalavalaaAllalyglpldeeelakla 45 
                 G GS++++a+a+a+Al+++ g+  d e +a+ +
  MMETSP1325-20131115|5427_1 163 GVGSGGSYALAAARALADMPGV--DAETIARKS 193
                 99*****************985..555664433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 1252.64
//
Query:       MMETSP1325-20131115|5431_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 469.49
//
Query:       MMETSP1325-20131115|5434_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.62
# Mc/sec: 297.61
//
Query:       MMETSP1325-20131115|5433_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-07   31.9   0.1    1.5e-07   31.5   0.1    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
    1.5e-06   27.5   0.2     0.0073   15.9   0.1    2.3  2  PF00023.25 Ankyrin repeat
    2.1e-05   24.7   0.0      3e-05   24.2   0.0    1.3  1  PF13637.1  Ankyrin repeats (many copies)
    7.1e-05   22.8   0.0    0.00014   21.9   0.0    1.5  1  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.039   14.0   8.1      0.052   13.6   5.6    1.3  1  PF07941.6  Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.1   5.4e-11   1.5e-07      40      83 ..       2      45 ..       1      49 [. 0.94

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 5.4e-11
   PF12796.2 40 eivklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83
                 ++++L+e+gad+nakd++g+t+L +A ++++ ++v  L  +ga
  MMETSP1325-20131115|5433_1  2 SCLEVLVEKGADLNAKDNSGKTALDFAKEYNEMDCVAALQRAGA 45
                699************************************99988 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   2.7e-06    0.0073      16      33 .]       2      19 ..       1      19 [. 0.93
   2 !    9.7   0.0   0.00025      0.69       2      27 ..      21      46 ..      20      50 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.7e-06
                HHHHHHHHTTSSTTHBHT CS
  PF00023.25 16 evvklLlsqGAdlnaqdd 33
                ++++ L+++GAdlna+d+
  MMETSP1325-20131115|5433_1  2 SCLEVLVEKGADLNAKDN 19
                799*************97 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00025
                SCBHHHHHHHTTHHHHHHHHHHTTSS CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAd 27
                G T+L  A +++ +++v  L  +GA 
  MMETSP1325-20131115|5433_1 21 GKTALDFAKEYNEMDCVAALQRAGAP 46
                99*******************99995 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.1e-08     3e-05      15      53 ..       2      40 ..       1      41 [. 0.86

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 1.1e-08
   PF13637.1 15 elvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                 +++ L+ekg+d+n++d+sG taL++A +++ ++++  L
  MMETSP1325-20131115|5433_1  2 SCLEVLVEKGADLNAKDNSGKTALDFAKEYNEMDCVAAL 40
                68999**********************777777777665 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   4.9e-08   0.00014      30      56 .]       2      28 ..       1      28 [. 0.95

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 4.9e-08
   PF13857.1 30 evvrlLlapgadlnlrdsdgltaldlA 56
                ++++ L+++gadln++d++g tald+A
  MMETSP1325-20131115|5433_1  2 SCLEVLVEKGADLNAKDNSGKTALDFA 28
                7999*********************98 PP

>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   5.6   1.9e-05     0.052      34      62 ..      39      67 ..      26      79 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.9e-05
                TTSSTTXXXHHHHSSXSXXXXXXXXXXXX CS
   PF07941.6 34 ahsraaaaaavaaataaveGeGGsGGGag 62
                a  ra a aa+ aata   G GG GGG g
  MMETSP1325-20131115|5433_1 39 ALQRAGAPAAAPAATAEAGGGGGGGGGHG 67
                66899999999999999888888777755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.34u 0.32s 00:00:00.66 Elapsed: 00:00:00.46
# Mc/sec: 442.81
//
Query:       MMETSP1325-20131115|5436_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 412.99
//
Query:       MMETSP1325-20131115|5439_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.035   13.8   1.2      0.047   13.4   0.8    1.2  1  PF01428.11 AN1-like Zinc finger
       0.27   11.1   2.4       0.44   10.4   1.7    1.3  1  PF12797.2  4Fe-4S binding domain


Domain annotation for each model (and alignments):
>> PF01428.11  AN1-like Zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.8   6.8e-06     0.047      13      28 ..      25      40 ..      19      43 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6.8e-06
                -EE-TTT--EE-GGG- CS
  PF01428.11 13 pfkCktCgknFClkHr 28
                  +C +Cg  FC +H 
  MMETSP1325-20131115|5439_1 25 AARCMDCGTPFCQTHT 40
                568************5 PP

>> PF12797.2  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.7   6.4e-05      0.44       6      22 .]      24      44 ..      20      44 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 6.4e-05
   PF12797.2  6 DlekCigCga..Cvs..aCPa 22
                +  +C+ Cg+  C++   CP+
  MMETSP1325-20131115|5439_1 24 QAARCMDCGTpfCQThtGCPV 44
                6789*********88889996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|5440_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       500  (0.0365711); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.59
# Mc/sec: 369.61
//
Query:       MMETSP1325-20131115|5438_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.57
# Mc/sec: 942.02
//
Query:       MMETSP1325-20131115|5442_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 805.58
//
Query:       MMETSP1325-20131115|5437_1  [L=275]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-15   56.3  11.3    0.00085   18.6   0.0    4.3  4  PF00132.19 Bacterial transferase hexapeptide (six repeats)


Domain annotation for each model (and alignments):
>> PF00132.19  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   6.2e-08   0.00085       8      35 ..      55      82 ..      53      83 .. 0.92
   2 !    8.5   0.3   9.7e-05       1.3      18      34 ..      86     102 ..      85     104 .. 0.80
   3 !   15.8   0.4   4.5e-07    0.0062      19      35 ..     112     128 ..     110     129 .. 0.74
   4 !   18.3   0.1   7.7e-08    0.0011       2      35 ..     130     163 ..     129     164 .. 0.95

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 6.2e-08
                EEE-TTEEEESSEBE-TTEEE-TTEEEE CS
  PF00132.19  8 vlIgpnvvigggviIGdnviIgagvvig 35
                +++ p ++++g+v+IG+++ I+ g++++
  MMETSP1325-20131115|5437_1 55 TFVAPTATLIGDVEIGPGSSIWYGARVR 82
                689999*******************997 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 9.7e-05
                 SSEBE-TTEEE-TTEEE CS
  PF00132.19  18 ggviIGdnviIgagvvi 34 
                 + ++IG+n+ +g ++ +
  MMETSP1325-20131115|5437_1  86 HSIKIGANSSVGDNAMV 102
                 77889999999998877 PP

  == domain 3    score: 15.8 bits;  conditional E-value: 4.5e-07
                 SEBE-TTEEE-TTEEEE CS
  PF00132.19  19 gviIGdnviIgagvvig 35 
                 +++IGdnv+Iga++ ++
  MMETSP1325-20131115|5437_1 112 PTVIGDNVTIGANALVH 128
                 57888888888888765 PP

  == domain 4    score: 18.3 bits;  conditional E-value: 7.7e-08
                 EEE-TTEEE-TTEEEESSEBE-TTEEE-TTEEEE CS
  PF00132.19   2 tvIGenvlIgpnvvigggviIGdnviIgagvvig 35 
                 +++++n+++g ++++++g+ + + + I++g+v++
  MMETSP1325-20131115|5437_1 130 CTLESNTVVGTGAQVLDGASVASTSMIAPGAVVT 163
                 7899****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.33s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 1292.15
//
Query:       MMETSP1325-20131115|5443_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|5445_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|5447_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.032   14.5   7.6      0.032   14.5   5.3    3.6  3  PF00428.14 60s Acidic ribosomal protein
        0.1   12.8  10.3       0.14   12.3   7.2    1.3  1  PF13476.1  AAA domain
       0.31    8.7   6.4       0.38    8.4   4.4    1.1  1  PF01496.14 V-type ATPase 116kDa subunit family
        1.6    5.8  21.6        2.1    5.4  14.9    1.1  1  PF12128.3  Protein of unknown function (DUF3584)
        3.1    7.8  15.8      0.033   14.2   1.2    2.8  2  PF12496.3  Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2
        6.1    6.2  10.7        9.1    5.7   7.4    1.4  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   5.3   1.4e-05     0.032      40      75 ..      97     139 ..      72     147 .. 0.60
   2 ?   -2.9   2.5       3.8   8.6e+03      70      76 ..     158     164 ..     153     183 .. 0.45
   3 ?  -13.7  14.4         6   1.4e+04      23      61 ..     182     220 ..     160     262 .. 0.53

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.4e-05
  PF00428.14  40 angsakla.......aaaaaaaaaaaaaaaaaaaeeekkeeee 75 
                 a+ s   +       a+ + +aaa+aaa  a+ ++e++ke+e+
  MMETSP1325-20131115|5447_1  97 ADTSREHQqgveaalAVTGNTAAAGAAATPAEVEKEKEKEKEK 139
                 4444443355554334444555555555555555555555554 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 3.8
  PF00428.14  70 kkeeeee 76 
                 k +eee+
  MMETSP1325-20131115|5447_1 158 KSKEEEQ 164
                 2222222 PP

  == domain 3    score: -13.7 bits;  conditional E-value: 6
  PF00428.14  23 lkllvkalegk..dikeliangsaklaaaaaaaaaaaaaaa 61 
                 ++ +v++le+   +i+e  ++ ++   + aa a  a+aa+a
  MMETSP1325-20131115|5447_1 182 MDKEVAQLEDRlrQIDETFEKNAQN--EKAANAQKAEAAEA 220
                 4444555554333455554444333..11111111111111 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   7.2   6.2e-05      0.14      69     201 ..      37     200 ..      13     219 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 6.2e-05
   PF13476.1  69 gkkkayvelsfeddkgrek.tylieeerektkkkgkkvkkeilellei.deleqfleellksdkeilpliaylgqer......................ekekfklkekkk.........rleelekelee.ledekellekllqeeekek.....eleeleeeleelleel 201
                 g  + + +++ +dd+++e+  y ++ e+ +++++ kk+ ++  e++++ +e    +e+ l       +    ++q+                       e  k+k+kek+k         rl  ++++ +  +e++ ++l+k+++e e  k     e  +le++l ++ e +
  MMETSP1325-20131115|5447_1  37 GVISLELKITVKDDDTGEDeDYDCSFEYDWKRDDPKKTAEDLVEEFGLpTEYVLRVEKILA------DTSREHQQGVeaalavtgntaaagaaatpaevE--KEKEKEKEKararkvhemRLNRIKESKKSkEEEQARILKKHEKEMEDIKrkmdkEVAQLEDRLRQIDETF 200
                 4445557788888666666799999999999999999999988888885333333333222......333333444444444444455666666776432..3333333334577778886666666655513445556777544444333456668888888888877765 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.4   0.00017      0.38      41     131 ..     134     218 ..      96     238 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00017
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXX CS
  PF01496.14  41 rkleseikkakielkdekekpdvpesk.......evedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrelssldee 131
                  k ++++++ k     +++       +       +  + ee++  l++  ke+e+++++++ke+++le +  +++e+ e+  +n  e++ ++++ + +
  MMETSP1325-20131115|5447_1 134 EKEKEKARARKV----HEM-------RlnrikesKKSKEEEQARILKKHEKEMEDIKRKMDKEVAQLEDRLRQIDETFEKNAQN--EKAANAQKAEAA 218
                 222222222222....222.......1333333266777888888899999999999999999999999999999988887776..344444444333 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  14.9   0.00091       2.1     631     730 ..     123     222 ..      93     226 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.00091
   PF12128.3 631 kqlnaeleeakravaeakqalkqarlelqrlkneqqslkdklekalaerkqqaeeqlqkldaelkqleekkkaaleelkddlreerlekkakwqevegel 730
                 ++  ae+e++k++++e+++a k ++ +l+r+k+ ++s +++  + l+++++++e   +k+d+e  qle   +++ e++++++++e+ +  +k ++ e+++
  MMETSP1325-20131115|5447_1 123 AATPAEVEKEKEKEKEKARARKVHEMRLNRIKESKKSKEEEQARILKKHEKEMEDIKRKMDKEVAQLEDRLRQIDETFEKNAQNEKAANAQKAEAAEATR 222
                 45668999***********************************************************************999999988888877777765 PP

>> PF12496.3  Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.2   1.4e-05     0.033      25      72 ..      26      78 ..       4     106 .. 0.72
   2 ?   -2.6   5.2       2.3   5.2e+03      34      73 ..     169     208 ..      92     229 .. 0.60

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.4e-05
   PF12496.3 25 sddvsessvdd......ldlslddldtpddedsldvegeleweddtpkagaase 72
                +  +s ssv d      l + + d dt +ded +d++ e +w+ d pk++a   
  MMETSP1325-20131115|5447_1 26 EARTSSSSVHDgvisleLKITVKDDDTGEDED-YDCSFEYDWKRDDPKKTAEDL 78
                4455666666677554455559999**99999.999999*********955443 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 2.3
   PF12496.3  34 ddldlslddldtpddedsldvegeleweddtpkagaases 73 
                    + +++d+  + d++  ++e+ l   d+t +++a +e+
  MMETSP1325-20131115|5447_1 169 KKHEKEMEDIKRKMDKEVAQLEDRLRQIDETFEKNAQNEK 208
                 2245557777777777777777755544444444222222 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   7.4     0.004       9.1      89     170 ..     125     210 ..      72     226 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.004
   PF04156.9  89 qlseleeeleqleerlaeleseledleedlellq....eelksleerlesleesikelakeirelreeisdlkeevqelrselerl 170
                 + +e e+e e++ e+  + + +   l++ +e+++    e+ + l+++ ++ e+   ++ ke+++l++ +++ +e++++  +  ++ 
  MMETSP1325-20131115|5447_1 125 TPAEVEKEKEKEKEKARARKVHEMRLNRIKESKKskeeEQARILKKHEKEMEDIKRKMDKEVAQLEDRLRQIDETFEKNAQNEKAA 210
                 55667777777777777777777777766666666668888888888888888888888888888866666666666555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2453  (0.179418); expected 273.4 (0.02)
Passed bias filter:                      734  (0.0536864); expected 273.4 (0.02)
Passed Vit filter:                       146  (0.0106788); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.03u 0.36s 00:00:01.39 Elapsed: 00:00:00.74
# Mc/sec: 880.82
//
Query:       MMETSP1325-20131115|5448_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       613  (0.0448362); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 215.18
//
Query:       MMETSP1325-20131115|5449_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.1e-25   87.2   0.0    6.5e-25   87.1   0.0    1.0  1  PF13537.1 Glutamine amidotransferase domain
    6.4e-18   64.8   0.0    6.7e-18   64.8   0.0    1.0  1  PF13522.1 Glutamine amidotransferase domain
    6.7e-06   25.3   0.1    8.9e-06   24.9   0.0    1.2  1  PF12481.3 Aluminium induced protein
    5.2e-05   22.6   0.0    5.8e-05   22.4   0.0    1.0  1  PF09147.5 Domain of unknown function (DUF1933)


Domain annotation for each model (and alignments):
>> PF13537.1  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.1   0.0   1.9e-28   6.5e-25      30     109 ..       1      77 [.       1      81 [] 0.95

  Alignments for each domain:
  == domain 1    score: 87.1 bits;  conditional E-value: 1.9e-28
   PF13537.1  30 GeiyNykelreeleakgykfrtesDtevllalleeleggeealkrlnGmfAfalwdkkekrlllaRDrlGikpLyygkde 109
                 GeiyN+kel++ l+++   frt sD+ev+++ ++e  +g ++ ++l+G fAf+++d +++++++aRD++G+  +y+g+ +
  MMETSP1325-20131115|5449_1   1 GEIYNHKELKAMLSDQ-TPFRTASDCEVIIHGYDE--WGVDVASKLDGDFAFVILDDQTGEVYAARDPVGVNSMYMGQGP 77 
                 9************986.79**************97..****************************************986 PP

>> PF13522.1  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.0     2e-21   6.7e-18      48     125 ..       1      77 [.       1      81 [] 0.96

  Alignments for each domain:
  == domain 1    score: 64.8 bits;  conditional E-value: 2e-21
   PF13522.1  48 GeiynyeelreelpakglafrtrsDsevllallkewGekalerldgmfafaiwdkrekklllardrlgikpLyygktg 125
                 Geiyn++el++ l++ + +frt sD ev+++ ++ewG +++++ldg+faf+i d +++++  ard +g+ ++y+g+  
  MMETSP1325-20131115|5449_1   1 GEIYNHKELKAMLSD-QTPFRTASDCEVIIHGYDEWGVDVASKLDGDFAFVILDDQTGEVYAARDPVGVNSMYMGQGP 77 
                 9*************9.9*********************************************************9864 PP

>> PF12481.3  Aluminium induced protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   2.6e-09   8.9e-06     125     167 ..      39      81 .]      35      81 .] 0.94

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 2.6e-09
   PF12481.3 125 vvkdleGsfafvlyDkkaktvfvaldadgkvplfWGiaadgsv 167
                 v ++l+G+fafv+ D ++  v++a d  g  +++ G   dgs+
  MMETSP1325-20131115|5449_1  39 VASKLDGDFAFVILDDQTGEVYAARDPVGVNSMYMGQGPDGSL 81 
                 7789*********************************999986 PP

>> PF09147.5  Domain of unknown function (DUF1933)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.7e-08   5.8e-05      55     130 ..       1      76 [.       1      80 [. 0.91

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 1.7e-08
                 ---S-HHHH----------GGG--HHHHHHHHHHH---GGGGG-----EEEE.E-----EEEEE-------EEEE-- CS
   PF09147.5  55 GslynksllrslagkieGeasvvndaeillllstklGaaalalaeGdfClfi.edknGeltvitesrGlnpvylvqa 130
                 G++yn++ l+ +++  +     ++d e+++   ++ G  + +  +Gdf + i +d+ Ge+    +  G+n +y+ q+
  MMETSP1325-20131115|5449_1   1 GEIYNHKELKAMLSDQTP-FRTASDCEVIIHGYDEWGVDVASKLDGDFAFVIlDDQTGEVYAARDPVGVNSMYMGQG 76 
                 899*******99998764.6789***************************876999****************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 373.28
//
Query:       MMETSP1325-20131115|5423_1  [L=582]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.68    7.6   2.5       0.96    7.1   1.7    1.1  1  PF05110.8 AF-4 proto-oncoprotein
        5.2    6.4   9.8         41    3.5   0.0    2.4  2  PF05568.6 African swine fever virus J13L protein


Domain annotation for each model (and alignments):
>> PF05110.8  AF-4 proto-oncoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   1.7   0.00014      0.96     413     462 ..     477     528 ..     466     534 .. 0.58

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00014
   PF05110.8 413 tekpksrsaP..psapsskpepaasasdsSsSeSeSeSsSgSDSesESSssd 462
                 +e ++++ +P   ++  + + p+a a d + +e e++ +S+SDS+s+S s d
  MMETSP1325-20131115|5423_1 477 AEAAEPPANPdlVPVVLPTAYPVAGAADAAVAEEEADPDSDSDSDSDSDSDD 528
                 5666677777433333344456666666666666666666666666555444 PP

>> PF05568.6  African swine fever virus J13L protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.006        41      99     148 ..     276     326 ..     260     355 .. 0.77
   2 ?    1.8   5.7     0.019   1.3e+02      76     144 ..     419     487 ..     415     516 .. 0.84

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.006
   PF05568.6  99 agkpvtdrpvtnrlvadkpvtnk.pvtdrlvmaaggpeaasatasaaasdp 148
                  g+   +r v+++lv d p      ++d   ++ ggp +a+a+  a a  +
  MMETSP1325-20131115|5423_1 276 GGHAAAGRIVSEHLVWDLPDQPDlVIVDTRFLTGGGPFCATAQRRARAVVS 326
                 5677889999999999999775515689999999*****999887666544 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.019
   PF05568.6  76 dqqwaevtpqpgiakpagastasagkpvtdrpvtnrlvadkpvtnkpvtdrlvmaaggpeaasatasaa 144
                 d +   vt +p + k a a+ ++ g  v+   +  r v    +t +  t + + a+   eaa  +a+  
  MMETSP1325-20131115|5423_1 419 DAKIVLVTGRPQLMKRAIAAGGARGVKVMRGKALMRAVKAAAATARTKTVDAGAATAAAEAAEPPANPD 487
                 5666779*****************************************9999****9999999998544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (582 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.92u 0.38s 00:00:01.30 Elapsed: 00:00:00.56
# Mc/sec: 2446.81
//
Query:       MMETSP1325-20131115|5453_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 464.29
//
Query:       MMETSP1325-20131115|5452_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-11   43.7   1.1    1.5e-11   43.6   0.7    1.0  1  PF02803.13 Thiolase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02803.13  Thiolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.7   1.1e-15   1.5e-11      81     123 .]       2      44 ..       1      44 [. 0.97

  Alignments for each domain:
  == domain 1    score: 43.6 bits;  conditional E-value: 1.1e-15
                 -------HHHHHHHHHHHHT..----EE---------EEEEE- CS
  PF02803.13  81 PlGasGaRilvtllselkkeggklglaalCigggqgvalviek 123
                 P+G+sGaRi+ ++l+ lkk+++ l+ a++C+ggg ++a+v+e+
  MMETSP1325-20131115|5452_1   2 PIGCSGARIMGSALTVLKKNDAGLATASICNGGGGASAIVLER 44 
                 9***************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.55
# Mc/sec: 200.42
//
Query:       MMETSP1325-20131115|5454_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       653  (0.0477618); expected 273.4 (0.02)
Passed bias filter:                      577  (0.042203); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|5451_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-05   22.6   3.7    7.2e-05   22.6   2.6    1.8  2  PF01145.20 SPFH domain / Band 7 family
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.018   14.4   0.0    1.2  1  PF13421.1  SPFH domain-Band 7 family
      0.013   13.8   0.2      0.015   13.6   0.1    1.1  1  PF07093.6  SGT1 protein
       0.22   11.4   7.8       0.51   10.2   5.4    1.7  1  PF05103.8  DivIVA protein


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   2.6   2.1e-08   7.2e-05      84     174 ..      16     106 ..       2     136 .. 0.86
   2 ?   -1.9   0.1      0.69   2.4e+03     159     174 ..     139     153 ..     115     160 .. 0.47

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 2.1e-08
  PF01145.20  84 qeeenlenllrrllesalrevlsqmtldeilsnrselaaelknelneqlqkyg.ievvdvritdvdpppevkqalakkqaaeaeaaeaeiar 174
                 + ++++e+  r+++  a+ ++ls+++  e+ +++++la+ l++++ ++l++y    v+++++  v++p+e+++a+ k q   + +  a+i+ 
  MMETSP1325-20131115|5451_1  16 FRPAKMERMFRNVAYWAALDALSKYSSYEANEQKEALASSLQDKIGQRLNQYFkASVTQLQLAGVTLPEEIAEAITKTQSVKENI-NAAINA 106
                 56778899999999999999********************************955599****************99988777666.555544 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.69
  PF01145.20 159 kkqaaeaeaaeaeiar 174
                    +a a+   a + +
  MMETSP1325-20131115|5451_1 139 TITTATADS-SAIVTK 153
                 222222222.333334 PP

>> PF13421.1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   5.4e-06     0.018     126     209 ..      14      96 ..       6      98 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5.4e-06
   PF13421.1 126 eeftteeiseqlrslivtrfsdllkeskipvldlaanseelseklreaikkel.aeyGleleellienislpeevekaldkrssm 209
                 ++f+  ++++ +r++   +  d+l  sk++  + + ++e+l+++l+++i ++l + +  ++++l+++ + lpee+ +a++k  s 
  MMETSP1325-20131115|5451_1  14 HTFRPAKMERMFRNVAYWAALDAL--SKYSSYEANEQKEALASSLQDKIGQRLnQYFKASVTQLQLAGVTLPEEIAEAITKTQSV 96 
                 566666777777777777777766..45677788889999*************5566899*******************998765 PP

>> PF07093.6  SGT1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   4.3e-06     0.015     163     215 ..      51     102 ..      30     145 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 4.3e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07093.6 163 laskeveaaikkRlkgypeaikenlhralvtlPakiakvLkqkPqliaaaVea 215
                    ++ ++ i +Rl++y +a  ++l+ a vtlP++ia+++++  + + + ++a
  MMETSP1325-20131115|5451_1  51 ALASSLQDKIGQRLNQYFKASVTQLQLAGVTLPEEIAEAITKTQS-VKENINA 102
                 4556899*********************************98533.3333332 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   5.4   0.00015      0.51      40     126 ..      85     175 ..      42     178 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00015
   PF05103.8  40 eneelkeeieeleekleeykelees...lkkslvvaqetaeev.kanakkeaeliikeaekkaekiveeaeeeakkleteldelkrqsrlf 126
                 e++e  ++ +  +e+++ + + +++     ++lv + e   +v   +a+  a+ +i++a++++++iv +a++ea   +  +delk ++  f
  MMETSP1325-20131115|5451_1  85 EIAEAITKTQSVKENINAAINAKDTaavAAQTLVYNAELDADVtIYAAEAAATATITTATADSSAIVTKAKAEADAYKVLFDELKTEYPDF 175
                 4444444444444444444333333111456677666665555056677788999******************************987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1272  (0.0930369); expected 273.4 (0.02)
Passed bias filter:                      623  (0.0455676); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.41s 00:00:00.99 Elapsed: 00:00:00.56
# Mc/sec: 882.87
//
Query:       MMETSP1325-20131115|5455_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 285.88
//
Query:       MMETSP1325-20131115|5457_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|5458_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.004   16.4   1.6     0.0047   16.2   1.1    1.1  1  PF12641.2  Flavodoxin domain
     0.0081   15.7   0.9     0.0092   15.5   0.6    1.1  1  PF04353.8  Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
  ------ inclusion threshold ------
       0.19   10.2   4.5       0.22   10.0   3.1    1.0  1  PF08317.6  Spc7 kinetochore protein
       0.25   11.0   6.3        0.4   10.3   4.3    1.4  1  PF12329.3  TATA element modulatory factor 1 DNA binding
       0.56   10.0   3.9       0.67    9.8   0.2    2.1  2  PF01166.13 TSC-22/dip/bun family


Domain annotation for each model (and alignments):
>> PF12641.2  Flavodoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.1   1.7e-06    0.0047      87     153 ..       3      63 ..       1      67 [. 0.82

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.7e-06
   PF12641.2  87 kilervkelleesnevlgeflcqGkidpkvrekykkmlkkdeehakleerlanfdeAlsHPdeeDle 153
                 +++e +ke ++ +n++l++  +qG i ++  ++++k    d++ ++le+  +++ + ++HPd + l+
  MMETSP1325-20131115|5458_1   3 TLIEDLKEKCNRNNKLLKK--AQGEITQATNKMLEK----DDKIRQLEKDNRKWRNQAEHPDISKLQ 63 
                 5678889999999999997..688887776665555....8999******************88776 PP

>> PF04353.8  Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.6   3.4e-06    0.0092      74     136 ..       2      66 ..       1      68 [. 0.79

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 3.4e-06
   PF04353.8  74 eqlvkeaeefgdkslelakelypkieetTevaldfndkyeekeedekeleel..dedLsklgell 136
                 e+l+++++e+ +++ +l k+   +i++ T+ +l+ +dk+++ e+d+++ ++   + d+skl + +
  MMETSP1325-20131115|5458_1   2 ETLIEDLKEKCNRNNKLLKKAQGEITQATNKMLEKDDKIRQLEKDNRKWRNQaeHPDISKLQQPM 66 
                 6789999999999***************************9666555544330145788877765 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.1   8.1e-05      0.22     225     284 ..       5      65 ..       1      68 [. 0.78

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 8.1e-05
   PF08317.6 225 ieekrkkleeleeelqelkkkiealkekkselleeiaeaekileecrgf.sakeisklkek 284
                 ie  ++k +  ++ l++ + +i+++++k+ e  ++i+++ek  ++ r+  +  +iskl++ 
  MMETSP1325-20131115|5458_1   5 IEDLKEKCNRNNKLLKKAQGEITQATNKMLEKDDKIRQLEKDNRKWRNQaEHPDISKLQQP 65 
                 6777788888888889999999999999999999999999998887765145589988875 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.3   0.00015       0.4      21      70 ..       5      54 ..       2      58 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00015
   PF12329.3 21 gekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerl 70
                +e+L  k +++n+ +kk + ++ ++++++ e ++k+ +lek+    ++ +
  MMETSP1325-20131115|5458_1  5 IEDLKEKCNRNNKLLKKAQGEITQATNKMLEKDDKIRQLEKDNRKWRNQA 54
                58999999*********************************987766655 PP

>> PF01166.13  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.6     0.087   2.4e+02      24      42 ..       6      21 ..       2      36 .. 0.57
   2 ?    9.8   0.2   0.00025      0.67      22      58 ..      32      68 ..      23      70 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.087
  PF01166.13 24 keLeeknsklerEnellks 42
                ++L+ek    +r n+llk+
  MMETSP1325-20131115|5458_1  6 EDLKEK---CNRNNKLLKK 21
                444433...4456666665 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00025
  PF01166.13 22 qIkeLeeknsklerEnellkslaspeqleqlqsqlql 58
                +  e  +k+++le+ n+  ++ a    +++lq+ +q+
  MMETSP1325-20131115|5458_1 32 KMLEKDDKIRQLEKDNRKWRNQAEHPDISKLQQPMQP 68
                56677899************************97775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1383  (0.101156); expected 273.4 (0.02)
Passed bias filter:                     1007  (0.0736542); expected 273.4 (0.02)
Passed Vit filter:                       140  (0.0102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.46s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 406.52
//
Query:       MMETSP1325-20131115|5459_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|5456_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-51  175.2   0.0    1.7e-51  174.7   0.0    1.1  1  PF00069.20 Protein kinase domain
    1.2e-38  132.6   0.0    1.4e-38  132.3   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    2.4e-05   24.0   0.4    0.00061   19.4   0.0    2.7  3  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.078   11.9   0.2        0.2   10.6   0.0    1.6  2  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
      0.091   12.6   0.0       0.19   11.5   0.0    1.5  1  PF03109.11 ABC1 family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.7   0.0   6.2e-55   1.7e-51       4     256 ..      49     303 ..      47     305 .. 0.93

  Alignments for each domain:
  == domain 1    score: 174.7 bits;  conditional E-value: 6.2e-55
                 EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE.CEESS-CSS----GGGS-HHHHH.......TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20   4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl.eksseklttlvgtreYmAPEvll.......kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilk 256
                 ++ l +G+ G+Vyk++  k +  vAvK +  +  + ++ ++  +E+ +l++l+Hp iv+l+++ ++   ly+v+e+v++ +l d++k + ++s++ + ++++ il  l++lH+++i+HrDLKp+N+L++ + e++i+D+Gla+ +      ++t   gt++Ym+PEv++       +++++ ++ Dv+s+Gv+++++ + + pf++ +  + + ++ ++++++  ++e+   +  + +  l+++++++dp +R+t++e+++
  MMETSP1325-20131115|5456_1  49 KKPLAAGGGGQVYKGTYGKAQ--VAVKSIFSQMVHASNLDEVHHEVTMLAQLHHPSIVRLFGITRNGPVLYIVTEFVDH-TLTDIMK-RPEYSTDVLIHLVEDILDVLSFLHDKSITHRDLKPQNVLVTGTMEVRICDLGLARIApVGAAATMTLGQGTPRYMPPEVMEgmtddgaEGRYDAAAWDVYSMGVMMWTMWFATEPFQSLNYFRLMTFVVQQQGRPPWSPEEPVPP--DAFVALVERMWATDPLERPTVHEVIE 303
                 57899************9998..*********999999999999*********************************99.8888888.*******************************************************989999999***************9999999999******************************88888888888777777777666655..99********************9987 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.3   0.0   5.2e-42   1.4e-38       4     258 ..      49     304 ..      45     305 .. 0.89

  Alignments for each domain:
  == domain 1    score: 132.3 bits;  conditional E-value: 5.2e-42
                 EEEE-------EEEEEEETTTTSSEEEEEEEEE.CTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE.......EEHHH.HHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-B...S---TTSBHHHHHHHHHHT-SSGGGS--HHHHHHH CS
  PF07714.12   4 gkklGeGafGkVvegtlkgekekkevkVavKtl.kesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk.......ftsks.DvWsfGvllwEiftlgespypglsneevlell.kegkr...lekpekcpeelyelmkqCweeepeeRptfkelvek 258
                 +k l +G  G+V++gt+       + +VavK++ ++  + ++ +e+ +e+ ++ +l+hp iv+l g+  ++  l+ivte+v++ +L +++++    + +++ l++++ +i + +++L++k++ HrdL  +NvL++ ++ v+i+D GLar         +++ ++   ++m+pE+++ ++       +  ++ Dv+s Gv++w +   + +p+++l+  ++++++ +++ r    ++    p+ +  l+++ w+++p eRpt +e++e 
  MMETSP1325-20131115|5456_1  49 KKPLAAGGGGQVYKGTYG------KAQVAVKSIfSQMVHASNLDEVHHEVTMLAQLHHPSIVRLFGITRNGPVLYIVTEFVDH-TLTDIMKRP---EYSTDVLIHLVEDILDVLSFLHDKSITHRDLKPQNVLVTGTMEVRICDLGLARIA-PVGAAATMTLGQGTPRYMPPEVMEGMTddgaegrYDAAAwDVYSMGVMMWTMWF-ATEPFQSLNYFRLMTFVvQQQGRppwSPEEPVPPDAFVALVERMWATDPLERPTVHEVIEA 304
                 467999************......99*******777888889**************************98888********99.79***9997...9999*************************************************88.777778888899999*********9999999999665545***********998.67********9999999766666232233344688999******************99875 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.039   1.1e+02       4     106 ..      51     156 ..      49     158 .. 0.70
   2 !   19.4   0.0   2.2e-07   0.00061     165     233 ..     157     224 ..     140     234 .. 0.71
   3 ?   -0.5   0.1      0.28   7.6e+02      70      99 ..     256     284 ..     208     334 .. 0.64

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.039
                 EEE--SSEEEEEEEETT.TEEEEEESSC....CHHHHHHHHHHHHHHHCCSSSB--BEEE..E-CSSCSCEEEEEE---HHBCCT.CSHHHHHHHHHHHHHHHHHHHH CS
  PF01636.18   4 elsgGasnrtyrvttgagryvlrrarpa....raaeelrrevallrlLakagipvPevlagdtdddvlgllfalleyvpgevler.klnarqlpallealaellaalh 106
                 +l++G   ++y  t g+ +++++ +  +     +  e+++ev +l++L+   i   +++ + +++ vl++++++++     ++ r + + + l +l+e++ ++l  lh
  MMETSP1325-20131115|5456_1  51 PLAAGGGGQVYKGTYGKAQVAVKSIFSQmvhaSNLDEVHHEVTMLAQLHHPSI--VRLFGITRNGPVLYIVTEFVDHTLTDIMKRpEYSTDVLIHLVEDILDVLSFLH 156
                 67888888999999999889998855554333377888888888888887666..48888777777777766666665555555565566777777777777777777 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 2.2e-07
                 --EEB-SS-SGGGEEEETTTTEEEE---TT-BBE-TCHHHHCCCTCHTCHHHHHHHHHHCHCHCS.HHH CS
  PF01636.18 165 ppvllHgDlhpgNllvdpddgrvgviDfedaglgpplyDlasllrrwreeldpellaallrayeleagp 233
                 +++++H+Dl+p+N+lv+ +  +v + D+++a+++p+ +   ++l   ++++ p    +++  +++e+ +
  MMETSP1325-20131115|5456_1 157 DKSITHRDLKPQNVLVT-GTMEVRICDLGLARIAPVGAAATMTLGQGTPRYMPPEVMEGMTDDGAEGRY 224
                 689**************.6677779**********9988888883345555444444444444444444 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.28
                 EEEEEE---HHBCCTCSHHHHHHHHHHHHH CS
  PF01636.18  70 lfalleyvpgevlerklnarqlpalleala 99 
                 l++++  ++g++++    ++  p+++ al+
  MMETSP1325-20131115|5456_1 256 LMTFVVQQQGRPPWS-PEEPVPPDAFVALV 284
                 333333344444444.44444444444443 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.72     2e+03     156     170 ..      33      47 ..      25      51 .. 0.73
   2 ?   10.6   0.0   7.2e-05       0.2      94     165 ..     118     183 ..     109     194 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 0.72
   PF06293.9 156 ekakvwliDldkarr 170
                 ++ + +l+D+dk + 
  MMETSP1325-20131115|5456_1  33 DNLNQYLLDFDKIKM 47 
                 677889999999765 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 7.2e-05
   PF06293.9  94 llteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDl 165
                 ++te ++++  L++i+++  e++  +   l+e++  + + +h+  + H+dl ++n+l+  +    +v + Dl
  MMETSP1325-20131115|5456_1 118 IVTEFVDHT--LTDIMKR-PEYSTDVLIHLVEDILDVLSFLHDKSITHRDLKPQNVLVTGTM---EVRICDL 183
                 566666654..7777776.668888888999999999999******************9987...6666666 PP

>> PF03109.11  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     7e-05      0.19      14      55 ..      47      87 ..      41     110 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 7e-05
  PF03109.11 14 fdeePlAaASiaQVHrAvlksgeeVavKvqrpgvkkriksDl 55
                ++++PlAa+  +QV++++   + +VavK    ++ ++ ++D 
  MMETSP1325-20131115|5456_1 47 MEKKPLAAGGGGQVYKGTYG-KAQVAVKSIFSQMVHASNLDE 87
                689**************876.578****98888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.68u 0.34s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 1769.23
//
Query:       MMETSP1325-20131115|5460_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-14   53.1   1.7    2.8e-14   52.7   0.1    1.8  2  PF01529.15 DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.4     0.067   9.1e+02      94     110 ..      29      45 ..      20      70 .. 0.50
   2 !   52.7   0.1     2e-18   2.8e-14       7     111 ..      75     164 ..      60     173 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.067
  PF01529.15  94 Fllfllyltlllviall 110
                 F++f  + t+l+v +++
  MMETSP1325-20131115|5460_1  29 FMVFCTFPTILFVSIVV 45 
                 44443333322222221 PP

  == domain 2    score: 52.7 bits;  conditional E-value: 2e-18
  PF01529.15   7 tyftdPgyvprssqdesneeeedkeekqraiqteaelknnekrfCkkCqtikpprshHCriCnkCvlkfDhHCpwvnncIGarNhkyFllfllyltlllvialll 111
                 + +tdPg ++r                +r+ + e+ + ++++++ ++ q ++pp + ++r+Cn  + +fDh Cpw++  IG +N + F +f+ +l+ l+++ ++l
  MMETSP1325-20131115|5460_1  75 VGLTDPGLFRRV---------------RRKPDDEDRDIEEQYIWSQQGQSWRPPTALYSRDCNVIISNFDHTCPWTGTAIGSGNMPAFDCFTKSLCALACFDICL 164
                 567888888888...............8899999999******************************************************99988887776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 853.10
//
Query:       MMETSP1325-20131115|5461_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|5466_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 278.15
//
Query:       MMETSP1325-20131115|5465_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        4.7    6.9   8.4        7.2    6.3   5.8    1.5  1  PF13885.1 Keratin, high sulfur B2 protein


Domain annotation for each model (and alignments):
>> PF13885.1  Keratin, high sulfur B2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.8   0.00052       7.2       8      44 ..       4      41 ..       1      54 [. 0.71

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00052
   PF13885.1  8 qpscCqpsCcrpscCqpscCq.psccrPsccvssccqP 44
                q+s+ qps+ ++s+ q+s+ q +++ +P  ++ +  +P
  MMETSP1325-20131115|5465_1  4 QSSSIQPSSMQSSSIQSSSIQlSTSVNPQPSTNPWPHP 41
                66666777777777777777766677777777655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 315.08
//
Query:       MMETSP1325-20131115|5463_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-06   26.9   0.0    3.3e-06   26.6   0.0    1.1  1  PF00578.16 AhpC/TSA family
     0.0052   16.2   0.0     0.0053   16.1   0.0    1.0  1  PF08534.5  Redoxin


Domain annotation for each model (and alignments):
>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   4.8e-10   3.3e-06      86     123 ..       1      38 [.       1      39 [. 0.97

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 4.8e-10
  PF00578.16  86 llsDeegevakaygvlneekglalratfvidkegkiry 123
                 llsDe+++++ ayg+++++++ a r t+v++k+g+ir+
  MMETSP1325-20131115|5463_1   1 LLSDESRAISLAYGAVKKKDQNARRMTVVVNKDGTIRE 38 
                 79**********************************97 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   7.8e-07    0.0053      90     134 ..       2      43 ..       1      53 [. 0.81

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 7.8e-07
                 E------HHHHHT..-EE------EE--EEEEEE---EEEEEE-S CS
   PF08534.5  90 lsDesasfakalglrltedasagirtpryavidedgkvvylevep 134
                 lsDes +++ a+g+   +++ ++ + + ++v+++dg +++++ e 
  MMETSP1325-20131115|5463_1   2 LSDESRAISLAYGAV--KKKDQN-ARRMTVVVNKDGTIRETIKEF 43 
                 89***********66..444444.889999*********998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 235.43
//
Query:       MMETSP1325-20131115|5467_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1003.47
//
Query:       MMETSP1325-20131115|5469_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.31s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 534.19
//
Query:       MMETSP1325-20131115|5468_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.083   12.5   0.3       0.16   11.6   0.0    1.5  2  PF08917.5 Transforming growth factor beta receptor 2 ectodomain


Domain annotation for each model (and alignments):
>> PF08917.5  Transforming growth factor beta receptor 2 ectodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.2e-05      0.16      35      86 ..      24      74 ..      10      76 .. 0.91
   2 ?   -2.9   0.0      0.36   4.9e+03      15      29 ..     134     148 ..     129     158 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.2e-05
                S--EEEEEEEETTEEEEEEE---TTS-------S-SSSSS-B-EEE------ CS
   PF08917.5 35 eevcvaiWrkedenvtletlchdPklklyglllddansskcvmkekksasgk 86
                ++ c  +W+ ++ ++tle  c +  + + + l+ +a++++ + kekk+asg 
  MMETSP1325-20131115|5468_1 24 QQHCTNVWKYKNIAFTLE-KCSNALKAVIERLIAEAEAKTREAKEKKRASGS 74
                677**************9.5999999999999***************99985 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 0.36
                 --S-SS-B------E CS
   PF08917.5  15 cdgkdscksncsits 29 
                  dg  +c  +c++  
  MMETSP1325-20131115|5468_1 134 LDGVFQCVRECQLGH 148
                 567778888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       662  (0.0484201); expected 273.4 (0.02)
Passed bias filter:                      540  (0.0394968); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 829.85
//
Query:       MMETSP1325-20131115|5471_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|5472_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 213.49
//
Query:       MMETSP1325-20131115|5473_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 218.62
//
Query:       MMETSP1325-20131115|5475_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 273.18
//
Query:       MMETSP1325-20131115|5476_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|5478_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-09   37.5   0.1    1.4e-09   37.4   0.1    1.0  1  PF13015.1 Glucosidase II beta subunit-like protein
  ------ inclusion threshold ------
      0.033   13.9   0.0      0.041   13.6   0.0    1.2  1  PF10609.4 ParA/MinD ATPase like
      0.096   11.7   0.3      0.098   11.7   0.2    1.1  1  PF09451.5 Autophagy-related protein 27


Domain annotation for each model (and alignments):
>> PF13015.1  Glucosidase II beta subunit-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.1   3.2e-13   1.4e-09      79     136 ..       1      59 [.       1      71 [. 0.83

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 3.2e-13
   PF13015.1  79 lkyekGakCWnG.PvRsaiveveCGdenelvsvseaekCeYllkvkspaaCsnvllkks 136
                 l ye+G+ C     +R + +++ CG+++ +vsv+e + C+Y++++ +p  C+   ++k+
  MMETSP1325-20131115|5478_1   1 LEYEDGTVCELTkEKRASTIQFLCGTSDTIVSVTEDHTCHYKVVITTPTLCKHPAFVKE 59 
                 679******75516788899*******************************77666655 PP

>> PF10609.4  ParA/MinD ATPase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.9e-06     0.041      11      45 ..      25      59 ..      20      70 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 8.9e-06
                ----HHHHHHHHH-----EEEE-CCC--HHHHHHH CS
   PF10609.4 11 GtgDehlslvqklpldgavivttpqevaladvrke 45
                Gt+D+ +s+++    +  v++ttp  +      ke
  MMETSP1325-20131115|5478_1 25 GTSDTIVSVTEDHTCHYKVVITTPTLCKHPAFVKE 59
                9***********************87766665555 PP

>> PF09451.5  Autophagy-related protein 27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   2.1e-05     0.098     131     175 ..      13      57 ..       6      74 .] 0.73

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.1e-05
   PF09451.5 131 ekeakaelefqCdkkksgdelelkvdddkkklklelktkaaClk...s 175
                 ++++  +++f C ++ +   ++   +d+++ +k+++ t+  C++    
  MMETSP1325-20131115|5478_1  13 KEKRASTIQFLCGTSDTIVSVT---EDHTCHYKVVITTPTLCKHpafV 57 
                 677788999***8876665555...5****************765541 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 328.39
//
Query:       MMETSP1325-20131115|5470_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       746  (0.0545641); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.40s 00:00:01.10 Elapsed: 00:00:00.51
# Mc/sec: 1588.17
//
Query:       MMETSP1325-20131115|5477_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.43   10.0   6.8       0.49    9.8   4.7    1.1  1  PF12071.3  Protein of unknown function (DUF3551)
        1.8    8.1   9.7        1.9    8.0   6.7    1.1  1  PF10099.4  Anti-sigma-K factor rskA
        3.5    7.5  11.2        3.2    7.6   7.8    1.1  1  PF06236.6  Tyrosinase co-factor MelC1
        7.3    6.0   7.7        6.7    6.2   5.4    1.1  1  PF07467.6  Beta-lactamase inhibitor (BLIP)


Domain annotation for each model (and alignments):
>> PF12071.3  Protein of unknown function (DUF3551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   4.7   0.00014      0.49       6      41 ..       6      42 ..       1      48 [. 0.73

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00014
   PF12071.3  6 laalalllaaaallaaatpaeArdypyClq.gggygy 41
                +aa+a+++a aa++aa+++a+A  y++ l+ + + ++
  MMETSP1325-20131115|5477_1  6 AAAAAAAAATAAATAATAAAAAAHYAFVLRlHXEIDM 42
                344444578888999999999999*999987777665 PP

>> PF10099.4  Anti-sigma-K factor rskA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   6.7   0.00056       1.9      39      89 ..       3      51 ..       1      56 [. 0.46

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00056
   PF10099.4 39 alaaaAaaavlalalllvqataaaaqpaaapalvavlasa.dgqpalvvsvd 89
                a+aaaAaaa++a+a++++   a+aa++aa  a+v  l  + d ++++ ++ d
  MMETSP1325-20131115|5477_1  3 AAAAAAAAAAAATAAATA---ATAAAAAAHYAFVLRLHXEiDMGGGMSMFGD 51
                223333333333333333...4555666666666666555666666666555 PP

>> PF06236.6  Tyrosinase co-factor MelC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.8   0.00095       3.2       3      28 ..       4      29 ..       1      53 [. 0.54

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00095
   PF06236.6  3 aAavvaaaaglaaaaeaaaaaeaaah 28
                aAa++aaaa ++aaa aa+aa+aaah
  MMETSP1325-20131115|5477_1  4 AAAAAAAAAAATAAATAATAAAAAAH 29
                22222222222333333333333333 PP

>> PF07467.6  Beta-lactamase inhibitor (BLIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.4     0.002       6.7      11      37 ..       5      31 ..       1      56 [. 0.49

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.002
                XXXXXXXXXXXXXXXXX-------HHH CS
   PF07467.6 11 laaaagavlatassanaasgftaekye 37
                +aaaa+a  ata+++ a+++ +a++y 
  MMETSP1325-20131115|5477_1  5 AAAAAAAAAATAAATAATAAAAAAHYA 31
                333333333444433344444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       920  (0.0672908); expected 273.4 (0.02)
Passed bias filter:                      568  (0.0415448); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.43s 00:00:00.84 Elapsed: 00:00:00.56
# Mc/sec: 248.19
//
Query:       MMETSP1325-20131115|5480_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.072   11.8   0.1      0.093   11.4   0.0    1.1  1  PF11902.3 Protein of unknown function (DUF3422)


Domain annotation for each model (and alignments):
>> PF11902.3  Protein of unknown function (DUF3422)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   6.8e-06     0.093     197     255 ..      33      93 ..      30     105 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.8e-06
   PF11902.3 197 iEtY.rlmallglplarelspelaeleerLaaltselaeskasae.elLseLtelaaevea 255
                 +EtY r+ma+  l la +l++++++l  rL +++++    +++   +lL+eL++ ++ v a
  MMETSP1325-20131115|5480_1  33 LETYhRNMAMRYLFLAADLAERCQTLGIRLPTMVEDTVLPSSTLPpALLEELSDHSSGVDA 93 
                 899989*****************************99998555555*******99988866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 704.24
//
Query:       MMETSP1325-20131115|5479_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.63
# Mc/sec: 521.11
//
Query:       MMETSP1325-20131115|5481_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.51
# Mc/sec: 540.36
//
Query:       MMETSP1325-20131115|5481_2  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 562.41
//
Query:       MMETSP1325-20131115|5482_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 701.48
//
Query:       MMETSP1325-20131115|5486_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.70
# Mc/sec: 701.79
//
Query:       MMETSP1325-20131115|5485_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.42s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|5489_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 323.95
//
Query:       MMETSP1325-20131115|5488_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 709.51
//
Query:       MMETSP1325-20131115|5490_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|5491_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-08   31.7  21.8    7.6e-08   31.6  15.1    1.0  1  PF12698.2  ABC-2 family transporter protein
  ------ inclusion threshold ------
       0.58    7.9  11.1       0.72    7.6   7.7    1.1  1  PF09586.5  Bacterial membrane protein YfhO
        3.8    6.6   9.4        6.4    5.8   6.5    1.6  1  PF00335.15 Tetraspanin family
        5.5    5.6  16.8        8.5    5.0  11.6    1.4  1  PF12679.2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6  15.1   2.2e-11   7.6e-08     209     344 .]       4     148 ..       1     148 [. 0.77

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 2.2e-11
   PF12698.2 209 ilgdllvgliql.llilll..afglegipfg.nlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfp.....leslp.sflkwifsiiPffslgdgllrii....tgd.lseillsliiLllfavvylllall 344
                 +l+d++v+ ++l l++ +l   f+   ++ g +++ ++++ + ++l+ +al+++lss+++s+ ta +v+++++++++++fl++f+     l  ++ ++ +++ ++ P  ++ +g++ ++    t +  +e+ +  +++ll +v+y  la++
  MMETSP1325-20131115|5491_1   4 LLADGVVMNLILtLFLSVLtvSFS---LFNGvDFGDIFFFVFSYCLSLTALAFALSSALDSPQTAGQVAFLVLVSGIAIFLVIFLggvttL--IDdETKQKAWCLYPPMAVQMGIYAAAsiplT-AtKIEMSTVSWFMLLDTVIYSFLAWY 148
                 566666654444144445522455...444459999**************************************99999999988886332..3336666677777777779999998889962.44689*******************96 PP

>> PF09586.5  Bacterial membrane protein YfhO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.7   0.00021      0.72     308     437 ..      12     135 ..       6     149 .. 0.66

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00021
   PF09586.5 308 falillflilsfllpplnlvwhgfqapqgfpyRfsfllsflilllaaealdelkelkklkilllllllvlllllilllknkksysfltsenlllsllllllylllllllll.......kkkrkklvilllllvlvle 437
                 ++++   l+ls +l+   ++++g  +   f++ fs+ ls++ l  a       ++      +++l+l+++++++ +++ ++ +++++  e+   +++l   +++ ++++++       +        + +  v  ++
  MMETSP1325-20131115|5491_1  12 NLIL--TLFLS-VLTVSFSLFNGVDFGDIFFFVFSYCLSLTALAFALSSALDSPQT--AGQVAFLVLVSGIAIFLVIF-LGGVTTLIDDETKQKAWCLYPPMAVQMGIYAAasipltaT-------KIEMSTVSWFM 135
                 4444..44443.36677799***********9999999999988887766655555..67777777777777754433.3456688888888999999999999999998855555442.......33322222222 PP

>> PF00335.15  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   6.5    0.0019       6.4      10      75 ..      36     103 ..       9     136 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0019
  PF00335.15  10 nllfllvG.lallgvgvwlkvsldllaeasnssksavilliiviGviililgilGcigal.....keskcll 75 
                  ++f++++ ++ l++ ++    ++ l+  s +++ +v +l++v G++i+++ +lG + +l     k++ ++l
  MMETSP1325-20131115|5491_1  36 DIFFFVFSyCLSLTALAFA--LSSALD--SPQTAGQVAFLVLVSGIAIFLVIFLGGVTTLiddetKQKAWCL 103
                 4677777754444444444..233333..33667888888888*************9887666665555555 PP

>> PF12679.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  11.6    0.0025       8.5     127     219 ..      13      97 ..       2     149 .. 0.55

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0025
   PF12679.2 127 lliailatvlltlvviaalgislalgdlllllllsvllllavlvflalgllvSsvlkssstaaaaalvl.lfllsllspilvlgiaklkaeelv 219
                 l++++         ++ +l++s++l + +++   + +++ + l  +al++++Ss l+s  ta ++a+ + +   +++  i++ g++ l  +e+ 
  MMETSP1325-20131115|5491_1  13 LILTL---------FLSVLTVSFSLFNGVDFGDIFFFVFSYCLSLTALAFALSSALDSPQTAGQVAFLVlVSGIAIFLVIFLGGVTTLIDDETK 97 
                 23333.........33333444444444444433333344334558******************996550556788888888887777665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       710  (0.051931); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|5493_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 474.75
//
Query:       MMETSP1325-20131115|5494_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 541.79
//
Query:       MMETSP1325-20131115|5498_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.45   11.0   6.2       0.67   10.5   4.3    1.3  1  PF08070.6 DTHCT (NUC029) region


Domain annotation for each model (and alignments):
>> PF08070.6  DTHCT (NUC029) region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.3   4.9e-05      0.67      14      83 ..      11      81 ..       2      93 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 4.9e-05
   PF08070.6 14 esdsdseagvskKpappkgkgkkkrkssssdesdsdfekkvsKsvtskKsKkdddddfevdlesav..apra 83
                + dsd+e++    +++  ++g+   + s+sd s s++e + s s  s  s   + dd+++d+e+a   a+ra
  MMETSP1325-20131115|5498_1 11 HLDSDTESDS-DYSEAESSQGSEASEISASDASSSEPEFEDSDSEGSEGSEDAETDDDPMDVEAAPeiAARA 81
                2344444443.4456666677899999***********************************9776335554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       472  (0.0345231); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 648.43
//
Query:       MMETSP1325-20131115|5496_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-09   35.3   0.4    1.2e-08   34.3   0.2    1.4  1  PF00013.24 KH domain
    8.7e-07   28.3   0.8    1.6e-06   27.5   0.6    1.5  1  PF13014.1  KH domain
  ------ inclusion threshold ------
      0.032   13.6   2.1      0.032   13.6   1.4    3.1  4  PF13696.1  Zinc knuckle
      0.041   13.7   3.9      0.041   13.7   2.7    3.0  3  PF00098.18 Zinc knuckle
      0.087   12.6   7.9       0.44   10.3   0.3    2.4  2  PF12353.3  Eukaryotic translation initiation factor 3 subunit G
       0.11   11.8   0.0       0.25   10.7   0.0    1.5  1  PF09438.5  Domain of unknown function (DUF2017)


Domain annotation for each model (and alignments):
>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.2   5.2e-12   1.2e-08       9      56 ..     133     198 ..     131     199 .. 0.84

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 5.2e-12
                 CCCHHH---TTHHHHHHHHHHT-EEEE--S................E..EEEEEE.SHHHHHHHHH CS
  PF00013.24   9 skigriIGkgGsnIkeIeeetgakIdvpkd................r.dtvtisG.dpesvekAkk 56 
                 ++ig iIG++G++ k++e+e+g+kI ++ +                +  +v i+G + e+ ++A +
  MMETSP1325-20131115|5496_1 133 NFIGLIIGPRGNTQKKMEKESGCKISIRGKgsvksgargpakgdeeDeLHVLITGdTEEQADRAVE 198
                 689************************5556666777777777765256******999**999987 PP

>> PF13014.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.6   7.2e-10   1.6e-06       1      43 []     134     187 ..     134     187 .. 0.85

  Alignments for each domain:
  == domain 1    score: 27.5 bits;  conditional E-value: 7.2e-10
   PF13014.1   1 lvgliIGkgGetIkeIreetGakIrfpk.........easpgsner..eitIrG 43 
                 ++gliIG++G t k++++e+G+kI++           +++ g++e+  ++ I+G
  MMETSP1325-20131115|5496_1 134 FIGLIIGPRGNTQKKMEKESGCKISIRGkgsvksgarGPAKGDEEDelHVLITG 187
                 69**************************99999999966666666645777776 PP

>> PF13696.1  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   1.3         6   1.4e+04       4       9 ..      66      71 ..      64      71 .. 0.83
   2 ?   -3.6   0.1       3.3   7.5e+03       5       9 ..     109     113 ..     108     114 .. 0.82
   3 ?   13.6   1.4   1.4e-05     0.032      11      30 ..     235     254 ..     233     256 .. 0.94
   4 ?    3.8   0.2     0.015        35      19      26 ..     268     275 ..     260     279 .. 0.74

  Alignments for each domain:
  == domain 1    score: -4.5 bits;  conditional E-value: 6
   PF13696.1  4 apPpkY 9 
                 pPp Y
  MMETSP1325-20131115|5496_1 66 SPPPTY 71
                599999 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 3.3
   PF13696.1   5 pPpkY 9  
                 pP+ Y
  MMETSP1325-20131115|5496_1 109 PPSDY 113
                 99999 PP

  == domain 3    score: 13.6 bits;  conditional E-value: 1.4e-05
   PF13696.1  11 CHlCfkkGHyIsDCPqasPk 30 
                 C +C +kGH  +DCP   Pk
  MMETSP1325-20131115|5496_1 235 CRICGEKGHKEHDCPTRDPK 254
                 9***************9998 PP

  == domain 4    score: 3.8 bits;  conditional E-value: 0.015
   PF13696.1  19 HyIsDCPq 26 
                 H  +DCPq
  MMETSP1325-20131115|5496_1 268 HATRDCPQ 275
                 889****9 PP

>> PF00098.18  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   2.7   1.8e-05     0.041       3      17 ..     235     249 ..     233     250 .. 0.93
   2 ?    1.1   0.1      0.17     4e+02       2       9 ..     260     267 ..     259     267 .. 0.86
   3 ?   -0.2   0.3      0.45     1e+03      14      18 .]     271     275 ..     271     275 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.8e-05
                 -S------------S CS
  PF00098.18   3 CynCGkeGHlardCp 17 
                 C+ CG+ GH   dCp
  MMETSP1325-20131115|5496_1 235 CRICGEKGHKEHDCP 249
                 **************9 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.17
                 --S----- CS
  PF00098.18   2 kCynCGke 9  
                 kC  CG++
  MMETSP1325-20131115|5496_1 260 KCAVCGEP 267
                 899***97 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.45
                 ---SS CS
  PF00098.18  14 rdCpe 18 
                 rdCp+
  MMETSP1325-20131115|5496_1 271 RDCPQ 275
                 9***7 PP

>> PF12353.3  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.1    0.0047        11     106     123 ..     234     252 ..     204     255 .. 0.86
   2 ?   10.3   0.3   0.00019      0.44     103     122 ..     257     276 ..     252     279 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0047
   PF12353.3 106 kCriCk.gdHfttkCPykd 123
                  CriC+ + H  + CP +d
  MMETSP1325-20131115|5496_1 234 YCRICGeKGHKEHDCPTRD 252
                 5****659********997 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00019
   PF12353.3 103 klvkCriCkgdHfttkCPyk 122
                  ++kC +C++ H t  CP +
  MMETSP1325-20131115|5496_1 257 GIIKCAVCGEPHATRDCPQR 276
                 589***************87 PP

>> PF09438.5  Domain of unknown function (DUF2017)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00011      0.25      42      97 ..     173     226 ..     162     231 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00011
   PF09438.5  42 apeDelaeltglrsgnaeaPedpaLaRLLPdfyrdddeasgdaselRrlteedlle 97 
                 a+ De  el  l +g++e+  d+a++  +P  ++ dd ++  + +lR+l+e ++++
  MMETSP1325-20131115|5496_1 173 AKGDEEDELHVLITGDTEEQADRAVELCMPLLQPVDDSTN--EHKLRQLKELSIIN 226
                 44455555556668********************999999..89*******99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.39s 00:00:01.02 Elapsed: 00:00:00.55
# Mc/sec: 1402.96
//
Query:       MMETSP1325-20131115|5499_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00052   19.5   0.8    0.00057   19.4   0.5    1.1  1  PF02683.10 Cytochrome C biogenesis protein transmembrane region
  ------ inclusion threshold ------
        4.1    7.2   7.6        2.8    7.7   0.5    2.7  3  PF09489.5  Probable cobalt transporter subunit (CbtB)


Domain annotation for each model (and alignments):
>> PF02683.10  Cytochrome C biogenesis protein transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.5   8.3e-08   0.00057     145     208 ..       6      70 ..       2      73 .. 0.68

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 8.3e-08
  PF02683.10 145 lasssesvllaalllvvYslglgiplllaglfaesllkfl.rslkknskaveiasGvllvllGll 208
                 +as + + +l+++ll+ Y+lg+++p++ ag f + +++ l  +  + s+ v  + G  lv +G++
  MMETSP1325-20131115|5499_1   6 AASGQANSALGLGLLLTYTLGYVTPVVAAGAFGTAATSALsDRGGEASELVVPVFGGGLVAYGVY 70 
                 344555589*********************99888774431333344455555545555666665 PP

>> PF09489.5  Probable cobalt transporter subunit (CbtB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.5   0.00041       2.8      14      35 ..       8      29 ..       4      34 .. 0.86
   2 ?    1.4   0.2      0.04   2.7e+02      15      26 ..      29      40 ..      27      46 .. 0.84
   3 ?    2.6   0.3     0.017   1.2e+02      18      39 ..      55      76 ..      38      77 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00041
   PF09489.5 14 llqavaaallGallvfavgfsq 35
                  qa  a+ lG+ll +++g++ 
  MMETSP1325-20131115|5499_1  8 SGQANSALGLGLLLTYTLGYVT 29
                578999*************975 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.04
   PF09489.5 15 lqavaaallGal 26
                +++vaa ++G++
  MMETSP1325-20131115|5499_1 29 TPVVAAGAFGTA 40
                6899*****985 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.017
   PF09489.5 18 vaaallGallvfavgfsqaeal 39
                +++ ++G +lv   ++s  eal
  MMETSP1325-20131115|5499_1 55 LVVPVFGGGLVAYGVYSGLEAL 76
                4556789999998888887775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 364.06
//
Query:       MMETSP1325-20131115|5492_1  [L=476]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-18   63.9  50.6    2.1e-05   23.8   3.0    6.9  7  PF02493.15 MORN repeat


Domain annotation for each model (and alignments):
>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0      0.77   1.1e+04       6      15 ..      53      62 ..      53      63 .. 0.77
   2 !   23.8   3.0   1.6e-09   2.1e-05       1      23 []     232     254 ..     232     254 .. 0.96
   3 !   20.9   1.1   1.3e-08   0.00018       1      22 [.     255     276 ..     255     277 .. 0.95
   4 !   13.2   1.7   3.7e-06      0.05       1      18 [.     278     295 ..     278     297 .. 0.93
   5 !   21.3   1.0   9.6e-09   0.00013       1      21 [.     304     324 ..     304     326 .. 0.97
   6 !    5.6   2.6   0.00091        12       1      14 [.     327     340 ..     327     341 .. 0.96
   7 !    7.0   0.1   0.00033       4.5       1      16 [.     351     366 ..     351     368 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 0.77
                ETTEEE-EEE CS
  PF02493.15  6 knGkrhGkGv 15
                k+Gkr+ +G+
  MMETSP1325-20131115|5492_1 53 KKGKRDASGK 62
                6799988887 PP

  == domain 2    score: 23.8 bits;  conditional E-value: 1.6e-09
                 EE-EEETTEEE-EEEB------- CS
  PF02493.15   1 YeGeWknGkrhGkGvytwpdGdr 23 
                 Y+GeWknG+++G G+y ++dG +
  MMETSP1325-20131115|5492_1 232 YDGEWKNGRMDGWGTYKFADGHT 254
                 9********************75 PP

  == domain 3    score: 20.9 bits;  conditional E-value: 1.3e-08
                 EE-EEETTEEE-EEEB------ CS
  PF02493.15   1 YeGeWknGkrhGkGvytwpdGd 22 
                 Y G Wk+G++hG Gv  +++G 
  MMETSP1325-20131115|5492_1 255 YKGKWKDGRMHGEGVAEYSSGH 276
                 99*****************997 PP

  == domain 4    score: 13.2 bits;  conditional E-value: 3.7e-06
                 EE-EEETTEEE-EEEB-- CS
  PF02493.15   1 YeGeWknGkrhGkGvytw 18 
                 Y G W +Gk hG G + +
  MMETSP1325-20131115|5492_1 278 YTGSWAHGKYHGRGLFEY 295
                 9*************9987 PP

  == domain 5    score: 21.3 bits;  conditional E-value: 9.6e-09
                 EE-EEETTEEE-EEEB----- CS
  PF02493.15   1 YeGeWknGkrhGkGvytwpdG 21 
                 Y+G Wk+G rhG+G +t p+G
  MMETSP1325-20131115|5492_1 304 YDGMWKEGHRHGYGELTLPSG 324
                 9******************99 PP

  == domain 6    score: 5.6 bits;  conditional E-value: 0.00091
                 EE-EEETTEEE-EE CS
  PF02493.15   1 YeGeWknGkrhGkG 14 
                 Y G+W  Gk +G G
  MMETSP1325-20131115|5492_1 327 YKGDWFWGKQQGIG 340
                 9***********99 PP

  == domain 7    score: 7.0 bits;  conditional E-value: 0.00033
                 EE-EEETTEEE-EEEB CS
  PF02493.15   1 YeGeWknGkrhGkGvy 16 
                 + G W +G+ +G G++
  MMETSP1325-20131115|5492_1 351 FVGRWEKGLINGTGTL 366
                 579***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       973  (0.0711673); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.84u 0.34s 00:00:01.18 Elapsed: 00:00:00.54
# Mc/sec: 2112.34
//
Query:       MMETSP1325-20131115|5500_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-08   33.6   3.7    3.9e-08   32.9   2.5    1.4  1  PF02575.11 YbaB/EbfC DNA-binding family
  ------ inclusion threshold ------
      0.029   13.3   0.6      0.044   12.6   0.3    1.2  1  PF00144.19 Beta-lactamase
      0.043   13.7   3.8       0.49   10.3   1.4    2.1  2  PF01346.13 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase


Domain annotation for each model (and alignments):
>> PF02575.11  YbaB/EbfC DNA-binding family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   2.5   8.6e-12   3.9e-08      12      90 ..      53     128 ..      43     131 .. 0.93

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 8.6e-12
  PF02575.11  12 eeaqeelaekevegesggglVkVtvnGkgevksveidpelldpedkemledlivaAindAlkkaeelakeemskltggl 90 
                 +++q++l++++ e +sgg  V+++ +G+g   +v +++ +l    +  + + +++A++dA  ++++ ++++m ++ ++l
  MMETSP1325-20131115|5500_1  53 DKMQKKLEAMTHESTSGG--VTAKYDGQGAPMEVVVSEGALA-GGPAKVGESVIQALKDARLASQKGMQQTMMEMQKEL 128
                 79**************99..*********************8.*****************************9998765 PP

>> PF00144.19  Beta-lactamase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.3   9.6e-06     0.044     203     261 ..      15      78 ..       2      94 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 9.6e-06
                 ...EE....HHHH..........EEEHHHHHHHH.HHHHHTGGGSSSHHHHHHHCHCHSEEEE- CS
  PF00144.19 203 earappanlpaeae....gagglistardlarfl.glalegglllsaetlaqltaklssgttrp 261
                  + +p ++ +++a+    gagg+ ++a+d  +++ + ++++++ l+a+t++ ++    + ++++
  MMETSP1325-20131115|5500_1  15 SPVEPSPPSQPPAAaggaGAGGVPGMAEDEIKLAmQYRDKMQKKLEAMTHESTSGGVTAKYDGQ 78 
                 333333333333334588****************888888888888888888877766666655 PP

>> PF01346.13  Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.016        73      60      90 ..      35      64 ..      31      77 .. 0.65
   2 ?   10.3   1.4   0.00011      0.49      54      89 ..     102     136 ..      95     139 .] 0.79

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.016
  PF01346.13 60 gkesklteeeiqkvlqalqkklqakqeekak 90
                g+ + + e+ei+ ++q ++ k+q+k e++  
  MMETSP1325-20131115|5500_1 35 GGVPGMAEDEIKLAMQ-YRDKMQKKLEAMTH 64
                6677788888887776.44455555544433 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00011
  PF01346.13  54 lqdalagkesklteeeiqkvlqalqkklqakqeeka 89 
                 + +al ++  + +++ +q++++++qk+l+a+ ++ a
  MMETSP1325-20131115|5500_1 102 VIQAL-KDARLASQKGMQQTMMEMQKELMAELQATA 136
                 34455.566699******************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       568  (0.0415448); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 666.19
//
Query:       MMETSP1325-20131115|5503_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-09   36.5   0.9    0.00047   19.5   0.0    2.7  3  PF01344.20 Kelch motif
    0.00069   19.5   0.0       0.19   11.8   0.0    2.4  2  PF13964.1  Kelch motif
     0.0032   17.4   0.2       0.31   11.1   0.0    2.4  2  PF13415.1  Galactose oxidase, central domain
  ------ inclusion threshold ------
      0.011   15.4   0.1       0.57    9.8   0.0    2.3  2  PF13418.1  Galactose oxidase, central domain
      0.025   14.5   0.1       0.17   11.9   0.0    2.4  3  PF07646.10 Kelch motif


Domain annotation for each model (and alignments):
>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   4.8e-06     0.013      14      46 ..      80     115 ..      80     116 .. 0.98
   2 ?   -1.9   0.0      0.83   2.3e+03       2      11 ..     119     128 ..     118     130 .. 0.80
   3 !   19.5   0.0   1.7e-07   0.00047       8      41 ..     136     169 ..     133     171 .] 0.94

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 4.8e-06
                 EEEE---BSTTS-TTEEEEEETT....TTEEEEECCS CS
  PF01344.20  14 iYviGGrdgdtnalnsVerYDpv....tntWeklpsm 46 
                 +Yv GG d   n+l+s+++ D+      n+W+++++m
  MMETSP1325-20131115|5503_1  80 VYVLGGKDK-DNVLSSCYQCDTDscgvHNEWMEMTPM 115
                 7********.**************************9 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.83
                 SSCEEEEEET CS
  PF01344.20   2 rssagvvvld 11 
                 r + g++v+ 
  MMETSP1325-20131115|5503_1 119 RMHPGAAVVY 128
                 8899999985 PP

  == domain 3    score: 19.5 bits;  conditional E-value: 1.7e-07
                 EEETTEEEEE---BSTTS-TTEEEEEETTTTEEE CS
  PF01344.20   8 vvldgkiYviGGrdgdtnalnsVerYDpvtntWe 41 
                 +vl+ +i+v+GG   d+ +l+s+e YD  t++W 
  MMETSP1325-20131115|5503_1 136 TVLNAQIFVVGGAGADGLPLDSIEYYDRPTDSWN 169
                 588999*******99******************6 PP

>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0067        18      14      38 ..      80     103 ..      74     119 .. 0.80
   2 !   11.8   0.0   6.8e-05      0.19      13      42 ..     141     170 ..     135     171 .] 0.92

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0067
   PF13964.1  14 iyifGGytnsgkylndvlvydpetk 38 
                 +y++GG +  ++ l++ + +d +++
  MMETSP1325-20131115|5503_1  80 VYVLGGKDK-DNVLSSCYQCDTDSC 103
                 8******99.899999999999886 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 6.8e-05
   PF13964.1  13 kiyifGGytnsgkylndvlvydpetksWeq 42 
                 +i+++GG++++g +l++++ yd  t+sW +
  MMETSP1325-20131115|5503_1 141 QIFVVGGAGADGLPLDSIEYYDRPTDSWNM 170
                 79**************************75 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00011      0.31       4      48 ..      80     126 ..      78     127 .. 0.87
   2 ?    4.2   0.0     0.017        45       4      20 ..     142     157 ..     139     170 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00011
   PF13415.1   4 lyvfGGlgddgqtrlndvyvldldtn....tweeigslPppRaghtata 48 
                 +yv GG +    + l+++y  d+d+     +w e+ ++ + R++ +a++
  MMETSP1325-20131115|5503_1  80 VYVLGGKD--KDNVLSSCYQCDTDSCgvhnEWMEMTPMLTQRMHPGAAV 126
                 79******..*************5555555*************988876 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.017
   PF13415.1   4 lyvfGGlgddgqtrlnd 20 
                 ++v+GG g d + +l +
  MMETSP1325-20131115|5503_1 142 IFVVGGAGAD-GLPLDS 157
                 8*******54.444444 PP

>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.021        58      15      41 ..      80     109 ..      74     122 .. 0.79
   2 ?    9.8   0.0   0.00021      0.57      13      42 ..     140     169 ..     136     171 .] 0.88

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.021
   PF13418.1  15 lylfGGenedggplnDlyvfDlst....ntW 41 
                 +y+ GG + d  +l+ +y+ D+++    n+W
  MMETSP1325-20131115|5503_1  80 VYVLGGKDKD-NVLSSCYQCDTDScgvhNEW 109
                 89*******9.6******9998775555677 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00021
   PF13418.1  13 grlylfGGenedggplnDlyvfDlstntWt 42 
                   ++++GG++ dg pl+ +  +D  t +W+
  MMETSP1325-20131115|5503_1 140 AQIFVVGGAGADGLPLDSIEYYDRPTDSWN 169
                 679**********9**99999999999997 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.74     2e+03      13      20 ..      79      86 ..      70     101 .. 0.72
   2 ?   -3.0   0.0       3.1   8.4e+03      39      48 ..     106     115 ..     105     115 .. 0.84
   3 ?   11.9   0.0   6.1e-05      0.17       9      42 ..     137     168 ..     119     169 .. 0.70

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.74
  PF07646.10 13 kiyvvGGa 20
                ++yv GG 
  MMETSP1325-20131115|5503_1 79 WVYVLGGK 86
                57888875 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 3.1
  PF07646.10  39 knvWeeltpl 48 
                 +n+W e+tp+
  MMETSP1325-20131115|5503_1 106 HNEWMEMTPM 115
                 7899999987 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 6.1e-05
  PF07646.10   9 vpggkiyvvGGahtdngllsssdlnvldpeknvW 42 
                 v++ +i+vvGGa++d+ +l+s+    +d  + +W
  MMETSP1325-20131115|5503_1 137 VLNAQIFVVGGAGADGLPLDSIEY--YDRPTDSW 168
                 4599********777777766655..66666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 871.87
//
Query:       MMETSP1325-20131115|5502_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 611.84
//
Query:       MMETSP1325-20131115|5505_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.47
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|5504_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-30  104.4  10.1      5e-30  104.0   7.0    1.1  1  PF13851.1  Growth-arrest specific micro-tubule binding
     0.0043   16.5   4.7     0.0073   15.7   3.3    1.5  1  PF01813.12 ATP synthase subunit D
     0.0066   16.4   7.6       0.18   11.8   0.7    2.2  2  PF00804.20 Syntaxin
     0.0093   14.7   2.5      0.016   13.9   1.6    1.4  1  PF02181.18 Formin Homology 2 Domain
  ------ inclusion threshold ------
      0.023   14.4   1.3      0.047   13.4   0.9    1.5  1  PF13769.1  Virulence factor
      0.027   14.1   1.4      0.038   13.6   1.0    1.2  1  PF00875.13 DNA photolyase
      0.028   14.5   4.8        2.3    8.3   3.3    2.2  1  PF09969.4  Uncharacterized conserved protein (DUF2203)
      0.086   12.7   7.6       0.33   10.8   3.6    2.1  2  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
       0.09   12.3   1.5       0.14   11.6   0.8    1.5  1  PF14136.1  Domain of unknown function (DUF4303)
       0.11   10.8   1.1       0.14   10.4   0.8    1.2  1  PF03599.11 CO dehydrogenase/acetyl-CoA synthase delta subunit
       0.12   12.4   5.3        1.2    9.2   0.1    2.5  2  PF08581.5  Tup N-terminal
       0.44   10.6   3.6        1.2    9.3   2.5    1.9  1  PF13616.1  PPIC-type PPIASE domain
       0.49    9.9   7.5        0.8    9.2   5.2    1.5  1  PF03962.10 Mnd1 family
          1    8.5  12.3       0.14   11.4   3.7    2.0  2  PF04012.7  PspA/IM30 family
        1.5    8.2   8.9        6.4    6.2   6.2    1.9  1  PF04156.9  IncA protein
        2.5    6.8   7.2       0.61    8.8   2.2    1.7  2  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        4.5    7.5   6.5        4.1    7.6   1.0    2.1  2  PF06156.8  Protein of unknown function (DUF972)
        6.1    6.9   7.6        4.6    7.3   2.0    2.7  2  PF05008.10 Vesicle transport v-SNARE protein N-terminus


Domain annotation for each model (and alignments):
>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.0   7.0   6.6e-33     5e-30      78     201 .]       1     124 [.       1     124 [. 0.99

  Alignments for each domain:
  == domain 1    score: 104.0 bits;  conditional E-value: 6.6e-33
   PF13851.1  78 lkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErdelykkfeaaiqdvqqktelknllLekKlealneelekkeaqLeevlaaanldpaaleavsekledvleeKnqeIkdL 201
                 lk+ +kdk sL+n+ka+l+  e++l+ lk++++ l  +   ve+Erd+ly  feaai++vqqkt++ n++Le+K+++ ++ +++ +aq e++ aaanldp ++e+++  + d l+++n +IkdL
  MMETSP1325-20131115|5504_1   1 LKDRDKDKLSLTNAKARLHVIENQLEGLKQKHKELGAQHLAVEKERDDLYHTFEAAIKEVQQKTDFSNIVLEQKIQQASRDVDEADAQAEQITAAANLDPMQMEQIRDSITDALRSRNGMIKDL 124
                 6899**********************************************************************************************************************98 PP

>> PF01813.12  ATP synthase subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   3.3   9.7e-06    0.0073       2      88 ..      10      92 ..       9     156 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 9.7e-06
  PF01813.12  2 eLirlkrrlklaqrghslLkkKrdaLilefrellkelkelreeleealkeayfslalaqasegediveavaesvketvevelkveni 88
                +L++ k+rl ++++ ++ Lk+K ++L ++ +++ ke  +l+ + e+a+ke++++    +++      + ++++   + e + + e+i
  MMETSP1325-20131115|5504_1 10 SLTNAKARLHVIENQLEGLKQKHKELGAQHLAVEKERDDLYHTFEAAIKEVQQKTDFSNIV----LEQKIQQASRDVDEADAQAEQI 92
                799*************************************************998888885....4444444445555666666655 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.5    0.0027         2      18      64 ..      20      63 ..      11      68 .. 0.87
   2 !   11.8   0.7   0.00024      0.18      13      69 ..      72     125 ..      66     145 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0027
  PF00804.20 18 kisekveelkrlhsrilaspdpdkqtkeeleeltaeikklankirsk 64
                 i++++e lk++h++++a +    ++++e ++l + +   ++++++k
  MMETSP1325-20131115|5504_1 20 VIENQLEGLKQKHKELGAQHL---AVEKERDDLYHTFEAAIKEVQQK 63
                58999***************9...89999999999999999888887 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00024
  PF00804.20  13 rgeiekisekveelkrlhsrilaspdpdkqtkeeleeltaeikklankirskLksle 69 
                 ++ i++ s +v+e + ++++i+a+ +    ++ ++e++   i++ +++ ++ +k+le
  MMETSP1325-20131115|5504_1  72 EQKIQQASRDVDEADAQAEQITAAAN---LDPMQMEQIRDSITDALRSRNGMIKDLE 125
                 5789**********************...68***********************987 PP

>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   1.6   2.1e-05     0.016     256     351 ..      47     146 ..      18     156 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.1e-05
                 SGGGGGHHHHTTTHHHCCTS-HHHHHHHHHHHHHHHHHHHHHHHCHHT....TSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---T CS
  PF02181.18 256 lpevldlsselsnvekaakvdleelekdvkklekglkklekeleksee....keeesdkfvekleefleeaeeklkkleeelkeakelfkelteYfgedp 351
                  +    ++  +++v++   ++   le+++++ +++++++  ++e+  +    ++ +++++++++++ l + +  +k le  l ++k+ f+++++ + e+ 
  MMETSP1325-20131115|5504_1  47 DDLYHTFEAAIKEVQQKTDFSNIVLEQKIQQASRDVDEADAQAEQITAaanlDPMQMEQIRDSITDALRSRNGMIKDLEYGLLRLKKGFNDALRTYSEQM 146
                 44455678999*****99999999*********************99999999*****************************************998764 PP

>> PF13769.1  Virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.9   6.2e-05     0.047      17      71 ..      43      94 ..      38     104 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6.2e-05
   PF13769.1 17 eearvqLperFeeaidraamkagakdsdnylaerkwaepgeryGdleeiaeevae 71
                e++r  L ++Fe+ai++++   +++d  n++ e k ++     ++ ++ ae++++
  MMETSP1325-20131115|5504_1 43 EKERDDLYHTFEAAIKEVQ---QKTDFSNIVLEQKIQQASRDVDEADAQAEQITA 94
                57899*************5...788899**********99999999999998776 PP

>> PF00875.13  DNA photolyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.0     5e-05     0.038      42     112 ..      12      89 ..       2     108 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5e-05
                 T--HHHHHHH---HHHHHHHHHH--.----EE---......HHHHHHHHHHHCT-SEEEEE---S---------HHHH CS
  PF00875.13  42 kvgaarrkfllesLedLkesLaklg.irLvvrrgd......paevlpelakelgvsavyanrdyepdererdeavkea 112
                 + ++ar + + ++Le Lk++ ++lg ++L v +++       +++++e+ ++++ s ++ +++++ + r+ dea ++a
  MMETSP1325-20131115|5504_1  12 TNAKARLHVIENQLEGLKQKHKELGaQHLAVEKERddlyhtFEAAIKEVQQKTDFSNIVLEQKIQQASRDVDEADAQA 89 
                 5689999******************667888777799***99*****************************9985444 PP

>> PF09969.4  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.3     0.003       2.3      10      81 ..      55     129 ..       8     142 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.003
   PF09969.4  10 ellpeieelleev.kelkaeleeleealeeaekeleaeelkeel.eeleeqiraaiee.ieelGvevkdldegLv 81 
                 + ++e+++++      l+++++++++ ++ea+ ++e+ + +++l  +  eqir++i + ++++ +++kdl+ gL+
  MMETSP1325-20131115|5504_1  55 AAIKEVQQKTDFSnIVLEQKIQQASRDVDEADAQAEQITAAANLdPMQMEQIRDSITDaLRSRNGMIKDLEYGLL 129
                 334444444433323345555555555555555556666666664566688888876658888888999988886 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.6   0.00044      0.33      40     129 ..       4      90 ..       1      96 [. 0.81
   2 ?    2.3   0.0      0.18   1.4e+02      73     113 ..      98     138 ..      89     149 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00044
   PF10473.4  40 qelvileaenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervseLeklnsslknl.Leekeqekvqikeesktave 129
                 +++  l + n+ka    +++++e ++++ k+L  +   v +e++ L +  +     ++e ++  +++ n+ Le+k+q+  +  +e+ +  e
  MMETSP1325-20131115|5504_1   4 RDKDKLSLTNAKARLHVIENQLEGLKQKHKELGAQHLAVEKERDDLYHTFEAA---IKEVQQ-KTDFSNIvLEQKIQQASRDVDEADAQAE 90 
                 555668899*************************************9998876...555544.5677777699999988887777776665 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.18
   PF10473.4  73 ldLvsvrsekenLakelqekqervseLeklnsslknlLeek 113
                 ld +++ + +++++  l+ + + +++Le  +  lk+  ++ 
  MMETSP1325-20131115|5504_1  98 LDPMQMEQIRDSITDALRSRNGMIKDLEYGLLRLKKGFNDA 138
                 6667788889******************9988888876665 PP

>> PF14136.1  Domain of unknown function (DUF4303)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.8   0.00019      0.14      82     129 ..      27      75 ..      13     101 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00019
   PF14136.1  82 llaerseelqneaedfeefreklleamvaaLreldeeglfgsg.eredi 129
                  l++ + el +++   e++r+ l+++++aa++e+ ++  f++   +++i
  MMETSP1325-20131115|5504_1  27 GLKQKHKELGAQHLAVEKERDDLYHTFEAAIKEVQQKTDFSNIvLEQKI 75 
                 3444555555444449*************************99555555 PP

>> PF03599.11  CO dehydrogenase/acetyl-CoA synthase delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.8   0.00019      0.14      38     131 ..       7      99 ..       5     123 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00019
  PF03599.11  38 DelseellkalaerieevvddwakkrvgekltldaiairlistdPakkfakavekvakavkvplvlggs....dpevlkaalevvederpllyaAtkd 131
                 D+ls   +ka+ + ie+  +   k++ +e l+++ +a+ ++ +d  + f++a+++v++++++  ++  +         ++  e+ +    + +aA++d
  MMETSP1325-20131115|5504_1   7 DKLSLTNAKARLHVIENQLEG-LKQKHKE-LGAQHLAVEKERDDLYHTFEAAIKEVQQKTDFSNIVLEQkiqqA---SRDVDEADAQAEQITAAANLD 99 
                 677777889999999998887.5555666.*******************************9655554423331...222223333333555666665 PP

>> PF08581.5  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   1.2      0.05        38       5      43 ..      24      62 ..      17      74 .. 0.89
   2 ?    9.2   0.1    0.0016       1.2      11      72 ..      73     134 ..      66     140 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.05
   PF08581.5  5 LLdairaEfealsreassykaqkedyelkiqqqiqEleq 43
                 L+ +++  ++l  +  +++++++d+ + +++ i+E++q
  MMETSP1325-20131115|5504_1 24 QLEGLKQKHKELGAQHLAVEKERDDLYHTFEAAIKEVQQ 62
                5899999999999999999****************9997 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0016
   PF08581.5  11 aEfealsreassykaqkedyelkiqqqiqEleqirqtvyeLeqahrkikekYeeeiarLkre 72 
                 + ++++sr++    aq e++    +     +eqir+++++  ++++ + +  e  + rLk+ 
  MMETSP1325-20131115|5504_1  73 QKIQQASRDVDEADAQAEQITAAANLDPMQMEQIRDSITDALRSRNGMIKDLEYGLLRLKKG 134
                 557788999999999999999999999***********************999999999975 PP

>> PF13616.1  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.5    0.0015       1.2      10      63 ..      58     112 ..      20     148 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0015
   PF13616.1  10 kqlpdsvkvshIlvdskg.kasrtkeeakakAdsilkalk.kgadFaalAkkySdD 63 
                 k+++++  +s I+++ k  +asr+ +ea a+A++i +a + ++ + +++      D
  MMETSP1325-20131115|5504_1  58 KEVQQKTDFSNIVLEQKIqQASRDVDEADAQAEQITAAANlDPMQMEQIRDSIT-D 112
                 55788999******9654899*****************9988888888877766.3 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.2     0.001       0.8      65     156 ..      26     122 ..       3     157 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.001
  PF03962.10  65 kklkteleklkkeleelkqrikelqaeieke.kkkreeteeree.lleelkeleeelkklkkele...klakldpekveklkeetevakesanrwtD 156
                 + lk+++++l ++   ++++ ++l   +e++ k+++++t+  +  l +++++ ++ +++  ++ e   ++a+ldp ++e++++++  a++s n +  
  MMETSP1325-20131115|5504_1  26 EGLKQKHKELGAQHLAVEKERDDLYHTFEAAiKEVQQKTDFSNIvLEQKIQQASRDVDEADAQAEqitAAANLDPMQMEQIRDSITDALRSRNGMIK 122
                 4566777777777777777777777777777555555554444346677778877777777766655588999999999999999999988776655 PP

>> PF04012.7  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.4      0.18   1.4e+02     117     141 ..      14      38 ..       4      49 .. 0.54
   2 ?   11.4   3.7   0.00018      0.14       8      66 ..      51     109 ..      47     115 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.18
   PF04012.7 117 lrkqlealetkieelkakkellkar 141
                 +++ l   e ++e lk+k ++l a+
  MMETSP1325-20131115|5504_1  14 AKARLHVIENQLEGLKQKHKELGAQ 38 
                 4444444444444444444444443 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.00018
   PF04012.7   8 rllraniselldkaeDPekileqairdmqselakarqalaqviarqkqlerkleeqkeq 66 
                   + a+i e+++k   ++ +leq i+ + +++++a  +++q+ a +    +++e+ ++ 
  MMETSP1325-20131115|5504_1  51 HTFEAAIKEVQQKTDFSNIVLEQKIQQASRDVDEADAQAEQITAAANLDPMQMEQIRDS 109
                 6789****************************************999999999888766 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.2    0.0084       6.4      81     168 ..       9      93 ..       2     149 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0084
   PF04156.9  81 eelsesesqlseleeeleqleerlaeleseledleedlellq....eelksleerlesleesikelakeirelreeisdlkeevqelrsele 168
                 ++l++++++l  +e +le l ++ +el ++ +++e+++++l      + k+++++ +  +  ++++ ++ ++         +e++ + ++++
  MMETSP1325-20131115|5504_1   9 LSLTNAKARLHVIENQLEGLKQKHKELGAQHLAVEKERDDLYhtfeAAIKEVQQKTDFSNIVLEQKIQQASRDV-------DEADAQAEQIT 93 
                 578999***********************************965553333344443333333333333333333.......34444444444 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.32   2.4e+02      60      89 ..       6      35 ..       2      39 .. 0.74
   2 ?    8.8   2.2   0.00081      0.61      27     101 ..      37     118 ..      33     146 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.32
   PF10186.4 60 qlklevaskkerieqirkrieqlkeeieqk 89
                + kl  ++ k+r++ i +++e lk++ +++
  MMETSP1325-20131115|5504_1  6 KDKLSLTNAKARLHVIENQLEGLKQKHKEL 35
                556666778889999999999998887765 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00081
   PF10186.4  27 lrlanlkaeketlkkkveealeeaene.......kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkeala 101
                  ++  + +e+++l +  e+a++e +++         +++qq + +v +  ++ eqi + + +   ++eq r +i    ++ +
  MMETSP1325-20131115|5504_1  37 AQHLAVEKERDDLYHTFEAAIKEVQQKtdfsnivLEQKIQQASRDVDEADAQAEQITAAANLDPMQMEQIRDSITDALRSRN 118
                 6788899***************8888899**9999999*******************9999999999999998876544444 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   1.0    0.0054       4.1      10      62 ..      11      63 ..       4      70 .. 0.82
   2 ?    2.5   0.1      0.22   1.7e+02      13      55 ..      71     113 ..      66     144 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0054
   PF06156.8 10 lseleeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkk 62
                l++ + +l+ + ++le lk++ kel  ++ +++ e + l++ +e   +e ++k
  MMETSP1325-20131115|5504_1 11 LTNAKARLHVIENQLEGLKQKHKELGAQHLAVEKERDDLYHTFEAAIKEVQQK 63
                66777889999999**************9999999999999988876655444 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.22
   PF06156.8  13 leeqleelleeleelkkelkelleenaelkleneklrerleel 55 
                 le+++++  ++++e  ++ ++++   +   ++ e++r+ +++ 
  MMETSP1325-20131115|5504_1  71 LEQKIQQASRDVDEADAQAEQITAAANLDPMQMEQIRDSITDA 113
                 7899999999999998888888887777777777777776654 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.6      0.36   2.7e+02      22      37 ..      45      60 ..       8      73 .. 0.56
   2 ?    7.3   2.0    0.0061       4.6      23      73 ..      71     124 ..      47     130 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.36
  PF05008.10 22 erkaalreiekkldea 37
                er  + + +e++++e 
  MMETSP1325-20131115|5504_1 45 ERDDLYHTFEAAIKEV 60
                4444444444444443 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0061
  PF05008.10  23 rkaalreiekkldeaeellkqMelEvr.nlps..serakykaklreykselkkl 73 
                  +++++++ +++dea++  +q    ++ +  +  ++r++++  lr+ +  +k+l
  MMETSP1325-20131115|5504_1  71 LEQKIQQASRDVDEADAQAEQITAAANlDPMQmeQIRDSITDALRSRNGMIKDL 124
                 579*********************999766445699999999999877766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1170  (0.0855764); expected 273.4 (0.02)
Passed bias filter:                      649  (0.0474693); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.68u 0.33s 00:00:01.01 Elapsed: 00:00:00.57
# Mc/sec: 739.57
//
Query:       MMETSP1325-20131115|5506_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.61
# Mc/sec: 404.63
//
Query:       MMETSP1325-20131115|5501_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 1649.80
//
Query:       MMETSP1325-20131115|5507_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.1   0.0      0.027   14.0   0.0    1.0  1  PF00967.12 Barwin family


Domain annotation for each model (and alignments):
>> PF00967.12  Barwin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     2e-06     0.027      48     105 ..      15      71 ..       4      77 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2e-06
  PF00967.12  48 fcgpagnrgqsscGkclrvtntatgasvivrivdqcsngGldldeavfkkldtdGaGy 105
                  cg+ ++r +++c      +n +   +  +r++   +++ ld+de v+   d  Ga  
  MMETSP1325-20131115|5507_1  15 VCGDMRDRFREACASA-ALRNPGGMRRDAARLLPAVADSSLDVDEEVMASADGAGASA 71 
                 6************875.67899999***********************9999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|5509_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.077   12.1   0.1      0.089   11.9   0.1    1.0  1  PF02515.12 CoA-transferase family III
       0.16   11.2   0.6       0.27   10.5   0.4    1.3  1  PF12427.3  Branched-chain amino acid aminotransferase


Domain annotation for each model (and alignments):
>> PF02515.12  CoA-transferase family III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.3e-05     0.089      88     135 ..      18      65 ..       4      68 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.3e-05
  PF02515.12  88 agepPvrvglpiaDiatGllaaaavlaAllerertGeGqrvdvsllea 135
                 ++ +   ++ +++D  +G  a+  +l  ll+ ++t +++++ v l+++
  MMETSP1325-20131115|5509_1  18 DAPTSSFHASSMVDEKAGSXAVPLILEVLLREAQTVRARHIAVELAGV 65 
                 33255778899*********************************9987 PP

>> PF12427.3  Branched-chain amino acid aminotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.4   3.9e-05      0.27       3      14 ..      11      22 ..      10      23 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 3.9e-05
   PF12427.3  3 eyTVTRTenPTS 14
                ey VT T+ PTS
  MMETSP1325-20131115|5509_1 11 EYVVTTTDAPTS 22
                899********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|5511_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 540.45
//
Query:       MMETSP1325-20131115|5512_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00028   20.2   0.0    0.00033   20.0   0.0    1.1  1  PF00207.17 Alpha-2-macroglobulin family


Domain annotation for each model (and alignments):
>> PF00207.17  Alpha-2-macroglobulin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.4e-08   0.00033       1      76 [.       6      83 ..       6      89 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.4e-08
  PF00207.17  1 swlwteievtdakgkarlslslpDsiTtWelqavalsaatglgvaepteirvfkeffvslrlPys..vrrgEqleika 76
                ++lw+ ++vtda+g a++s+s  D i+t+ +++ +   a  lg ++   +++ +++ v  ++ +s  v+ g+++ +++
  MMETSP1325-20131115|5512_1  6 TLLWSAVRVTDAQGIANFSFSASDAIATYTASVDGAAVAGVLGAVRVSLFSTQQPLTVFSKIGSSieVTAGDKILLPV 83
                789********************************************999999**99988887772244566666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|5514_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.37s 00:00:00.63 Elapsed: 00:00:00.52
# Mc/sec: 170.51
//
Query:       MMETSP1325-20131115|5518_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 549.75
//
Query:       MMETSP1325-20131115|5508_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|5519_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       557  (0.0407402); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 533.53
//
Query:       MMETSP1325-20131115|5520_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 496.09
//
Query:       MMETSP1325-20131115|5515_1  [L=389]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.8e-68  228.5   0.0    1.4e-67  227.9   0.0    1.3  1  PF00331.15 Glycosyl hydrolase family 10


Domain annotation for each model (and alignments):
>> PF00331.15  Glycosyl hydrolase family 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.9   0.0     1e-71   1.4e-67      24     318 ..       4     317 ..       1     319 [. 0.91

  Alignments for each domain:
  == domain 1    score: 227.9 bits;  conditional E-value: 1e-71
                 CHHHHHHHHHH-SEEEESSTTSHHHHBSBTTBEE-HHHHHHHHHHHHTT-EEEEEESBESSSS-HHHHTSTTCHHHHHHHHHHHHHHHHHHHHHHTHHCS-BSEEEEEES-B-SCC.................H.BSBTTSHHHHH--THHHHHHHHHHHHHST.....TSEEEEE-SSTTST......HHHHHHHHHHHHHHHTT----EE--EEEEESTCS.HHHHHHHHHHHHTT--EEEEECEEEESSTTTTC....HHHHHHHHHHHHHHHHHHHHCTTGTEEEEEB---BGGGSTTGGCTEG--SSB-TTSBB-HHHHHHHH CS
  PF00331.15  24 eskekeilkkefnsitaeNemKpdalepsegkfnfeeadeivdfakengikvrgHtLvWhsqlpkwvfkeengkkaskelllkrlenhiktvverykgkgkvyawDVvNEaldeng.................segklresvwyqilGedyiekaFeaAreadp.....nakLyyNDYnteee......akreaivklvkklkekgvpidGiGlQsHlsvdsp.iaeiekalkkfaklglevqiTELDisvkkssse....eekleaqakrykelfkallkvkkskikgvtvWGvsDkesWlssaakeapllfdenyqakpaykavvd 318
                 +s+++++ ++++  +taeN++K+ ++ ps+g +nf+++d i+++ak+ g+++rgH+L W +  p+wv      ++++    +++l ++i+ v++ry +    yawDV NE + ++                   +  +++s wy  +  d +e aF++A  a +      +kL++NDY+ e++      ak++ ++ l ++l +kg+p++GiG+Q Hl++ +   + +++++k++ +lglev++TELD+s++ ++++    +e++e+qak y+ l++++l+++   +++  +WGv+Dk++W+ +  +++pl fden++ k a  ++++
  MMETSP1325-20131115|5515_1   4 DSAYAALAAAQYSLVTAENACKWATISPSKGAYNFDDCDYIYNTAKASGQAFRGHNLAWGNYNPSWVDA---LSPDD---KRSALVEYISRVAARYPD---AYAWDVYNEPVCDDFpfaaaagleicdgtddgLNAIYKNSSWYPDVP-DALELAFTTAADALEsvnatGVKLFLNDYMAESStgvlyaAKADRVYTLAQQLLAKGIPLHGIGMQFHLDLTYSsFDGVRANMKRLGELGLEVHVTELDVSCSLTETTcswgDEDAEKQAKIYASLLQVCLDEP--ACTAFDTWGVTDKYTWRGT--SQHPLPFDENLNSKAAVASMLE 317
                 458899999**********************************************************97...56666...789**************5...7**********998777766666666554333223345599999885.88***********998988889**********999999999*************************************************************8887779999********************88..******************9..7***************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.36s 00:00:01.06 Elapsed: 00:00:00.60
# Mc/sec: 1553.64
//
Query:       MMETSP1325-20131115|5522_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 289.37
//
Query:       MMETSP1325-20131115|5525_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.4   10.7   4.0        2.1    8.4   0.4    2.2  2  PF03707.11 Bacterial signalling protein N terminal repeat
        4.9    5.2   6.5        5.9    5.0   4.5    1.1  1  PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus


Domain annotation for each model (and alignments):
>> PF03707.11  Bacterial signalling protein N terminal repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.4    0.0003       2.1      22      60 ..      53      91 ..      35      93 .. 0.82
   2 ?    3.5   0.1      0.01        68      20      60 ..     105     141 ..      95     142 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0003
  PF03707.11 22 eydpllvllSlliavaalavallalavtrltlrllaggl 60
                ++dp++++  + + va++a++++++av +  lr lag++
  MMETSP1325-20131115|5525_1 53 PPDPAPAPPPVGAVVAGAAAGAAVAAVVPPPLRPLAGAA 91
                45555555556699*******************999987 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.01
  PF03707.11  20 pieydpllvllSlliavaalavallalavtrltlrllaggl 60 
                 +  + p++v     +a a+++ ++ a++ + +  ++la++l
  MMETSP1325-20131115|5525_1 105 RRSHPPPAVA----VAEATTVETARAMSDADKGRVVLARAL 141
                 4555566666....*******************99999987 PP

>> PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   4.5   0.00087       5.9     261     343 ..      69     145 ..      51     152 .. 0.55

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.00087
   PF07462.6 261 gvtaeakvtavvtppsadaaaapdsvrpagasgaasgstsaptaesvlGegaaatelqvvvklqdydeeddklvvlp.lfgedd 343
                 g++a a+v+avv pp    a a+  +++a++++ +s  +++p+a  v+   +a+    +v  ++  ++ d   vvl+   +++d
  MMETSP1325-20131115|5525_1  69 GAAAGAAVAAVVPPPLRPLAGAAAVATGAAVASPSSRRSHPPPAVAVA---EAT----TVETARAMSDADKGRVVLArALSNND 145
                 455556666666666666666666666666666666666666666555...222....23333333333333333330334443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       520  (0.0380339); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.66
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|5524_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|5527_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 552.63
//
Query:       MMETSP1325-20131115|5529_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-16   57.1   0.1    9.8e-16   57.1   0.0    1.0  1  PF00982.16 Glycosyltransferase family 20


Domain annotation for each model (and alignments):
>> PF00982.16  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.0   7.1e-20   9.8e-16     368     435 ..       3      69 ..       1      71 [] 0.93

  Alignments for each domain:
  == domain 1    score: 57.1 bits;  conditional E-value: 7.1e-20
                 HHHHH--B--B--S-----HHHHHHHHHS-T-----EEETT---TTT-TTS.EEE-TT-HHHHHHHHH CS
  PF00982.16 368 alyaaadvllvtslRdGmnlvakeyvvcqqekkgvLiLSeFaGaaqsLkdaailvNPwdieevaeaik 435
                 a   a dvll t +R+G+nl ++e+v++++e  gv++ SeF  ++++L+ +ai++NP+d++++a +++
  MMETSP1325-20131115|5529_1   3 ATWLACDVLLNTTVREGLNLDCFEFVYVKEESAGVIVASEFGSTSSVLN-GAIRTNPFDVDAIALSLD 69 
                 677889*******************************************.88**********998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 298.49
//
Query:       MMETSP1325-20131115|5528_1  [L=369]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 1881.40
//
Query:       MMETSP1325-20131115|5532_1  [L=402]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-33  113.9   0.0    9.3e-33  113.1   0.0    1.4  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    6.8e-07   29.3   0.3     0.0026   17.7   0.0    2.6  2  PF13401.1  AAA domain
      1e-06   27.8   0.0    6.7e-06   25.2   0.0    2.0  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    1.6e-05   25.2   3.5     0.0022   18.2   0.0    3.1  3  PF13191.1  AAA ATPase domain
    0.00013   21.6   0.4     0.0045   16.5   0.3    2.4  1  PF07728.9  AAA domain (dynein-related subfamily)
    0.00048   20.7   0.0    0.00096   19.8   0.0    1.6  1  PF13207.1  AAA domain
    0.00084   18.9   2.4    0.00095   18.7   0.0    2.3  2  PF13245.1  Part of AAA domain
     0.0023   17.7   0.0     0.0059   16.3   0.0    1.8  1  PF13671.1  AAA domain
  ------ inclusion threshold ------
      0.012   14.9   0.0      0.018   14.3   0.0    1.2  1  PF01695.12 IstB-like ATP binding protein
      0.015   14.3   0.3       0.28   10.2   0.0    2.9  4  PF01078.16 Magnesium chelatase, subunit ChlI
      0.019   14.2   0.5       0.16   11.1   0.1    2.3  2  PF13481.1  AAA domain
      0.022   14.9   0.0      0.055   13.6   0.0    1.7  1  PF13238.1  AAA domain
      0.039   14.0   0.0      0.063   13.3   0.0    1.3  1  PF00910.17 RNA helicase
       0.04   13.3   0.0      0.063   12.7   0.0    1.3  1  PF13479.1  AAA domain
      0.053   12.6   0.0      0.086   11.9   0.0    1.2  1  PF06048.6  Domain of unknown function (DUF927)
       0.09   11.5   0.0         11    4.6   0.0    3.1  3  PF00437.15 Type II/IV secretion system protein
      0.093   12.5   0.0       0.14   11.9   0.0    1.3  1  PF13173.1  AAA domain
       0.12   11.7   0.1       0.56    9.5   0.0    1.8  2  PF00270.24 DEAD/DEAH box helicase
       0.15   11.5   0.0       0.19   11.1   0.0    1.4  1  PF13086.1  AAA domain
       0.27    9.5   0.0        0.4    8.9   0.0    1.1  1  PF13166.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.1   0.0   1.4e-35   9.3e-33       1     131 [.      87     214 ..      87     215 .. 0.97

  Alignments for each domain:
  == domain 1    score: 113.1 bits;  conditional E-value: 1.4e-35
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHHTTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkieie 131
                 +l+yGppGtGKT++a+  a ++  +++ + +  l+sk+ g++e+++++lf+++ +    ++lf+DE+dala+srs++ +e ++r+++ Ll+ ldg++ +  ++++++atnr  +ld+all +Rfd++++++
  MMETSP1325-20131115|5532_1  87 LLFYGPPGTGKTTAARIAAAQARLPLVYTPLEALMSKWYGKAEQQLAMLFDHCGALG-RCVLFLDELDALAGSRSREIDEASRRMLSVLLRRLDGMEAQ-PDITLVAATNRRTDLDSALL-SRFDVRVHFP 214
                 69**************************************************99987.9***************************************6.77******************.******9987 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   3.7e-06    0.0026       4      28 ..      84     108 ..      80     125 .. 0.81
   2 !    9.3   0.1    0.0015       1.1      71     119 ..     127     189 ..     112     197 .. 0.75

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 3.7e-06
   PF13401.1   4 agilvvtGesGvGKTtllrrlarql 28 
                 ++ l+++G++G+GKTt++r  a q+
  MMETSP1325-20131115|5532_1  84 SNALLFYGPPGTGKTTAARIAAAQA 108
                 67899**************999887 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0015
   PF13401.1  71 tteellealqealrrrrtrlliiDEaqrL...........seealeelrslldd...etgvkl 119
                 ++e+ l++l +++ + ++++l +DE++ L           s ++l+ l + ld    + +++l
  MMETSP1325-20131115|5532_1 127 KAEQQLAMLFDHCGALGRCVLFLDELDALagsrsreideaSRRMLSVLLRRLDGmeaQPDITL 189
                 677888999999999999***********8877555544449999988777776655555554 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   9.8e-09   6.7e-06      51     193 ..      85     230 ..      70     251 .. 0.73

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 9.8e-09
   PF05496.7  51 dhvllyGpPGlGkttlakiiakelgvelkvtsgPvl.....ek.agdlaalltnlee..kdvlfideihrlsraveevlysamedfkldivigkGpsarsvkldlpkftlvgattraglltsPlrdrfgivarlefyeveelkeivkrsak 193
                 + +l+yGpPG Gktt a+i a++    l  t   +l      k +++la l+ +  +  + vlf+de+  l+ +    +  a     l +++ +  + ++     p  tlv+at r + l s l +rf +  ++   e+   ++i+   ak
  MMETSP1325-20131115|5532_1  85 NALLFYGPPGTGKTTAARIAAAQARLPLVYTPLEALmskwyGKaEQQLAMLFDHCGAlgRCVLFLDELDALAGSRSREIDEASR-RMLSVLLRRLDGMEA----QPDITLVAATNRRTDLDSALLSRFDVRVHFPTPEAPARAKILALYAK 230
                 5689********************9999999877762222223145666666665442278**********9888777777754.457777765444333....3789*********************9988876666666666665555 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   3.2e-06    0.0022      16      48 ..      76     109 ..      61     119 .. 0.69
   2 ?    5.7   0.1     0.022        15     115     159 ..     130     179 ..     115     190 .. 0.79
   3 ?    0.3   0.1         1     7e+02      64     103 ..     261     317 ..     235     344 .. 0.54

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 3.2e-06
   PF13191.1  16 lrrvsegsp.....lllvtGpsGiGKSsLlrelakpil 48 
                  r+     +     +ll++Gp+G+GK++ +r  a++++
  MMETSP1325-20131115|5532_1  76 TRSF----SsdrsnALLFYGPPGTGKTTAARIAAAQAR 109
                 3331....1233459***************98665554 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.022
   PF13191.1 115 qalvalldaalartrrpklvlvlDD........lqwadresldlLeallerls 159
                 q+l+ l d + a +r   +vl+lD+          + d++s  +L  ll+rl 
  MMETSP1325-20131115|5532_1 130 QQLAMLFDHCGALGR---CVLFLDEldalagsrSREIDEASRRMLSVLLRRLD 179
                 555556666666667...9*****87799999999999999999999999865 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 1
   PF13191.1  64 rn.................lpysaiiqalrellrqlltelaaelggwreallaalga 103
                  +                 +p+s+   a+r  +++ +++++ +++g++++++aa++ 
  MMETSP1325-20131115|5532_1 261 NRwvsvllrggddfdgpllPPLSEYEAAVRRRVQSSADKEDGAEAGAEREKQAAAER 317
                 444444444555555555555555555555555555555554444444444444443 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.3   6.6e-06    0.0045       2     139 .]      87     207 ..      86     207 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 6.6e-06
                 EEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------..G-SEEEEESGGG---HHHHHHHHHHHSSEEE..-..---EEE---.......-EEEEE-SS--.-TT-TTHHHHTT- CS
   PF07728.9   2 vlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrlllpe..ggelvkaknddlleknfrviatanpldrslnelspalrsRf 139
                 +l  GppGtgK++ a+  a+  + +++y  l + ++      ++    g+++ + + l + +     ++l+lDE++    + ++s  + ++e  +++ +  +++l +      ++++++++a++n++     +l++al+sRf
  MMETSP1325-20131115|5532_1  87 LLFYGPPGTGKTTAARIAAAQARLPLVYTPLEALMS------KWY---GKAEQQLAMLFDHCGalGRCVLFLDELD----ALAGSRSREIDEASRRMLSvlLRRLDGM----EAQPDITLVAATNRRT----DLDSALLSRF 207
                 7899************999999******99999665......444...4444555666666666678899999999....7777777777775555333003333333....3466799999999999....8999999998 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.4e-06   0.00096       3      40 ..      88     125 ..      87     251 .. 0.70

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 1.4e-06
                 --B--TT---HHHHHHHHHHSTEEEEEGGG.B--GGGS- CS
   PF13207.1   3 aitGppGsGKsTlakeLaerlglpvlsldd.llreeglk 40 
                 +++GppG+GK+T+a+  a +  lp +++     +   ++
  MMETSP1325-20131115|5532_1  88 LFYGPPGTGKTTAARIAAAQARLPLVYTPLeA-LMSKWY 125
                 679**************997666654433321.444455 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.4e-06   0.00095      14      35 ..      88     108 ..      77     123 .. 0.81
   2 ?   -3.0   0.0       8.1   5.5e+03      45      53 ..     187     195 ..     165     198 .. 0.54

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1.4e-06
   PF13245.1  14 vvtGgPGtGKTttlaaiiaall 35 
                 +  G+PGtGKT t+a+i+aa +
  MMETSP1325-20131115|5532_1  88 LFYGPPGTGKT-TAARIAAAQA 108
                 447********.*****99876 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 8.1
   PF13245.1  45 vllvaptgr 53 
                 + lva t+r
  MMETSP1325-20131115|5532_1 187 ITLVAATNR 195
                 445555554 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   8.7e-06    0.0059       2      47 ..      87     158 ..      86     231 .. 0.59

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 8.7e-06
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrlsqdt..lrkrlfgtdqqskt........................d 47 
                 +l+ G+pG+GK+t a+  +++    ++ ++   l+++++g+  q+++                        +
  MMETSP1325-20131115|5532_1  87 LLFYGPPGTGKTTAARIAAAQARLPLVYTPLeaLMSKWYGKAEQQLAmlfdhcgalgrcvlfldeldalagS 158
                 5899************99988885555554333666777666665554444444444444444444444331 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   2.7e-05     0.018      46      91 ..      83     125 ..      70     165 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.7e-05
  PF01695.12  46 qaenlvllGpsGvGKthlAialgveavraglsvlfvrledLveeLk 91 
                 +++ l++ Gp+G+GKt   +a  ++a++a+l  +++ le L+++  
  MMETSP1325-20131115|5532_1  83 RSNALLFYGPPGTGKT---TAARIAAAQARLPLVYTPLEALMSKWY 125
                 44567889*******9...566789999999999999999998754 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00041      0.28      24      41 ..      86     103 ..      81     119 .. 0.84
   2 ?   -0.9   0.0      0.98   6.7e+02     108     119 ..     145     156 ..     142     196 .. 0.63
   3 ?   -0.9   0.0      0.97   6.6e+02     181     201 ..     195     215 ..     177     220 .. 0.78
   4 ?   -1.8   0.0       1.8   1.3e+03      45      72 ..     278     305 ..     277     319 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00041
  PF01078.16  24 nlllvGppGsGKtmlakr 41 
                  ll++GppG+GKt  a+ 
  MMETSP1325-20131115|5532_1  86 ALLFYGPPGTGKTTAARI 103
                 699**********98864 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.98
  PF01078.16 108 GvLfLDElpefk 119
                  vLfLDEl  + 
  MMETSP1325-20131115|5532_1 145 CVLFLDELDALA 156
                 699999997664 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.97
  PF01078.16 181 YlsklsgplldRidlqvevka 201
                  ++ l  +ll R+d++v+ ++
  MMETSP1325-20131115|5532_1 195 RRTDLDSALLSRFDVRVHFPT 215
                 55678899*******998865 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 1.8
  PF01078.16  45 llpplseeealevakiasvagkkeeekl 72 
                 llpplse ea   ++++s a+k+  +++
  MMETSP1325-20131115|5532_1 278 LLPPLSEYEAAVRRRVQSSADKEDGAEA 305
                 89*******9999999999986665554 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00024      0.16      33      55 ..      84     105 ..      81     141 .. 0.80
   2 ?    0.7   0.0      0.38   2.6e+02     128     172 ..     130     174 ..     101     192 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00024
   PF13481.1  33 gsltllaGapgtGKStlalqlaa 55 
                  + +l++G+pgtGK+t a  +aa
  MMETSP1325-20131115|5532_1  84 SNALLFYGPPGTGKTTAA-RIAA 105
                 66789***********88.4444 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.38
   PF13481.1 128 adlerllaaieelegpdlvviDtlsrlvggdensnsdv.gaviaal 172
                 ++l+ l +++ +  g  ++ +D l++l+g+ + + +++ +++++ l
  MMETSP1325-20131115|5532_1 130 QQLAMLFDHCGA-LGRCVLFLDELDALAGSRSREIDEAsRRMLSVL 174
                 556667777777.4688999********997777777667777665 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.1e-05     0.055       3      21 ..      89     107 ..      88     154 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 8.1e-05
   PF13238.1   3 itGtpGvGKtTlakeLaer 21 
                 + G+pG+GKtT+a++ a  
  MMETSP1325-20131115|5532_1  89 FYGPPGTGKTTAARIAAAQ 107
                 67************99765 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.2e-05     0.063       2      57 ..      88     137 ..      87     144 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 9.2e-05
  PF00910.17   2 wlyGpsgeGKStlakeLakallkklklkkkdsvys.rnpeddfwdgYtgqevvvidD 57 
                 ++yGp+g+GK+t+a+   +a      + + + vy+  ++  + w+g  +q+  + +D
  MMETSP1325-20131115|5532_1  88 LFYGPPGTGKTTAARI--AAA-----QARLPLVYTpLEALMSKWYGKAEQQLAMLFD 137
                 79*************9..222.....3344678888888888888888666666655 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   9.3e-05     0.063       6      21 ..      87     102 ..      82     111 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 9.3e-05
   PF13479.1   6 vliYGkpGiGKTslak 21 
                 +l YG+pG+GKT+ a+
  MMETSP1325-20131115|5532_1  87 LLFYGPPGTGKTTAAR 102
                 689**********987 PP

>> PF06048.6  Domain of unknown function (DUF927)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00013     0.086     195     253 ..      87     155 ..      79     163 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00013
   PF06048.6 195 fhlvgeSstGKttalklAaSvwGnpe......elvrsWrsTangleatasennd....vllilDEisea 253
                 + ++g  +tGKtta+++Aa  +  p        l+++W + a    a++  + +    ++l+lDE++  
  MMETSP1325-20131115|5532_1  87 LLFYGPPGTGKTTAARIAAAQARLPLvytpleALMSKWYGKAEQQLAMLFDHCGalgrCVLFLDELDAL 155
                 5699999*************9999999999999**********99999999998444457999999876 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       0.3     2e+02     232     248 ..       9      25 ..       6      35 .. 0.84
   2 ?    4.6   0.0     0.016        11     128     149 ..      84     105 ..      60     111 .. 0.85
   3 ?    1.5   0.0      0.14        99      64     120 ..     260     315 ..     257     323 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.3
  PF00437.15 232 ansaasalerLeqlgke 248
                 a+++ +a++rL+++g+ 
  MMETSP1325-20131115|5532_1   9 ARTPEEAIKRLQKMGAR 25 
                 78999*********965 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.016
  PF00437.15 128 rgnilvsGgTgsGKttllnall 149
                    +l+ G+ g+GKtt + ++ 
  MMETSP1325-20131115|5532_1  84 SNALLFYGPPGTGKTTAARIAA 105
                 4678999*********987665 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.14
  PF00437.15  64 krplldarlpekgerfrvvllPvveeeklviRkkssaslsledlaakgalkkklaev 120
                 ++ +++  l  +g +f + llP + e ++++R++ ++s + ed a++ga ++k+a++
  MMETSP1325-20131115|5532_1 260 ENRWVSVLLR-GGDDFDGPLLPPLSEYEAAVRRRVQSSADKEDGAEAGAEREKQAAA 315
                 5666777777.999************9999999999999999999888888877665 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0    0.0002      0.14       3      73 ..      85     155 ..      83     204 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.0002
   PF13173.1   3 kilvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe.llelfleklke..kkkylflDEiqev 73 
                 ++l+ +Gp ++GKtt ++  a +       +y  l+    + + + e  l +++++  +  ++ +lflDE   +
  MMETSP1325-20131115|5532_1  85 NALLFYGPPGTGKTTAARIAAAQAR--LPLVYTPLEALMSKWYGKAEqQLAMLFDHC-GalGRCVLFLDELDAL 155
                 678999**********988877766..89*******977744444332345555542.2458999*****9876 PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00081      0.56      17      70 ..      87     130 ..      79     141 .. 0.82
   2 ?   -0.8   0.0       1.2   8.2e+02     127     151 ..     147     170 ..     135     200 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00081
                 EEEEC-TT---HHHHHHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00270.24  17 vlvaaeTGsGKTlaflipvlqilletlkkttikkalivaPtreLaeqtlnnlkk 70 
                 +l  ++ G+GKT+a+ i++ q+ l           l+ +P+++L+ + + ++++
  MMETSP1325-20131115|5532_1  87 LLFYGPPGTGKTTAARIAAAQARL----------PLVYTPLEALMSKWYGKAEQ 130
                 6778999*************9763..........48889999998888877766 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 1.2
                 EEECTHHHHHCTTTHHHHHHHHHHS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00270.24 127 lVlDEadrllsqgfsdqlnqilqil 151
                 l lDE d l   ++s ++++  +++
  MMETSP1325-20131115|5532_1 147 LFLDELDALAG-SRSREIDEASRRM 170
                 66999999999.6666555533332 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00028      0.19      17      38 ..      84     105 ..      70     325 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00028
   PF13086.1  17 sgitliqGpPgtGKtttiveli 38 
                 s+  l  GpPgtGKtt    + 
  MMETSP1325-20131115|5532_1  84 SNALLFYGPPGTGKTTAARIAA 105
                 336799*********6543333 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   0.00058       0.4      20      39 ..      88     107 ..      74     114 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00058
   PF13166.1  20 lIYGrNGsGKtTlSrllrsl 39 
                 l+YG+ G+GKtT +r+ +++
  MMETSP1325-20131115|5532_1  88 LFYGPPGTGKTTAARIAAAQ 107
                 8**************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       508  (0.0371562); expected 273.4 (0.02)
Passed bias filter:                      390  (0.0285255); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.88u 0.36s 00:00:01.24 Elapsed: 00:00:00.67
# Mc/sec: 1437.81
//
Query:       MMETSP1325-20131115|5536_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-18   66.1   0.1    1.7e-18   66.0   0.0    1.0  1  PF01329.14 Pterin 4 alpha carbinolamine dehydratase


Domain annotation for each model (and alignments):
>> PF01329.14  Pterin 4 alpha carbinolamine dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.0   1.2e-22   1.7e-18      51      95 ..       1      45 [.       1      46 [. 0.97

  Alignments for each domain:
  == domain 1    score: 66.0 bits;  conditional E-value: 1.2e-22
                HHHHHT---EEEEETTEEEEEE--GGG----HHHHHHHHHHHHHH CS
  PF01329.14 51 laekenHHPelsleynkveveltThdigglsenDfklAakidela 95
                +aek++HHPe++++yn+vev+l+Thd ggls+ Df+lA+++de+a
  MMETSP1325-20131115|5536_1  1 VAEKMDHHPEWFNVYNRVEVTLSTHDTGGLSKLDFDLAKRMDEIA 45
                69*****************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.33s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 244.63
//
Query:       MMETSP1325-20131115|5537_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       77  (0.00563195); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|5535_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.9   0.3      0.012   15.9   0.2    1.1  1  PF00428.14 60s Acidic ribosomal protein
        1.1    8.6   4.0        1.1    8.7   2.8    1.1  1  PF08374.6  Protocadherin
        5.3    4.9   7.5        4.8    5.0   5.2    1.0  1  PF10214.4  RNA polymerase I-specific transcription-initiation factor


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.9   0.2   2.5e-06     0.012      49      76 ..      25      52 ..       6      54 .] 0.67

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.5e-06
  PF00428.14 49 aaaaaaaaaaaaaaaaaaeeekkeeeee 76
                   ++ a+ aa+++ ++++++kk+++++
  MMETSP1325-20131115|5535_1 25 RMMSPRAGRAAGGGREKKKKKKKKKKKK 52
                4456667777777777777777777765 PP

>> PF08374.6  Protocadherin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.8   0.00024       1.1      79     104 ..      23      53 ..       5      54 .] 0.54

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00024
   PF08374.6  79 eedfvsP.....kqedkqkkkkkkkkkksdk 104
                    ++sP      +  ++kkkkkkkkkk ++
  MMETSP1325-20131115|5535_1  23 GGRMMSPragraAGGGREKKKKKKKKKKKKR 53 
                 4567888655553344555555555555444 PP

>> PF10214.4  RNA polymerase I-specific transcription-initiation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   5.2    0.0011       4.8     771     790 ..      33      52 ..       9      53 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0011
   PF10214.4 771 rgksgsReasrkkkkKKKRk 790
                 r + g+Re+++kkkkKKK+k
  MMETSP1325-20131115|5535_1  33 RAAGGGREKKKKKKKKKKKK 52 
                 556699*9998887777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       724  (0.0529549); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|5540_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 337.45
//
Query:       MMETSP1325-20131115|5539_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.2   10.9   3.6       0.25   10.6   2.5    1.1  1  PF00487.19 Fatty acid desaturase


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.5   1.8e-05      0.25      92     191 ..       2      92 ..       1     105 [. 0.58

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 1.8e-05
  PF00487.19  92 lklrrllyrlllglllggllfllalerrklrkrrrrkglalllallilalllalaglllllsglgalllyvvplalaltvlllvnyleHyglet.ednnaa 191
                 ++l +ll+ + lgl+  +++f+++l+    + ++         ++++++ ++al + +++l   ++l+++++++a +++v+     + H+   + ++ ++a
  MMETSP1325-20131115|5539_1   2 RWLMQLLMNFTLGLIGALFVFVWRLWGLIAAYQPDP------FTAVMYFGAAALSATVCVL---SYLAIMYAAAAGTVGVVGKAL-VDHARRIEnDPQARA 92 
                 68999************************9888876......2233333333333333333...555555555554444443322.337665555333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       762  (0.0557343); expected 273.4 (0.02)
Passed bias filter:                      514  (0.0375951); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 616.93
//
Query:       MMETSP1325-20131115|5542_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|5541_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-25   89.7   0.7    1.9e-25   89.2   0.5    1.2  1  PF00861.17 Ribosomal L18p/L5e family
  ------ inclusion threshold ------
      0.012   15.6   0.1      0.039   14.0   0.0    1.9  1  PF06474.7  MltD lipid attachment motif
      0.053   13.0   2.2        3.1    7.2   0.1    2.2  2  PF05526.6  Rhodococcus equi virulence-associated protein
       0.11   11.7   0.2       0.15   11.3   0.1    1.1  1  PF10112.4  5-bromo-4-chloroindolyl phosphate hydrolysis protein


Domain annotation for each model (and alignments):
>> PF00861.17  Ribosomal L18p/L5e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.5   5.5e-29   1.9e-25       9     118 ..      64     170 ..      56     171 .] 0.88

  Alignments for each domain:
  == domain 1    score: 89.2 bits;  conditional E-value: 5.5e-29
                 HHHCCCCCCCCTSSS-CEEEEEESSCEEEEEEE-SS---EEEECCCSCCCTT----TT--SHHHHHH---HCCCHHHH----EEE---....-------HCHHHHHHHCC---B CS
  PF00861.17   9 krlvvqrknkgttekpRLvVrrsnkhiyaQiiddtkegdlvlasalskelkkyglkvgltntaaAklvGlllAkralkkgiavlvfdl....ggttyggrvfalakgareaGLk 118
                  + +++r +++++ k R++V+rsn+hiyaQ+i+d +++++++as+   +l+     +g++n+aaA  vG++lA+ a++kg ++l fd+    +++ y+grv++l++g+re+G++
  MMETSP1325-20131115|5541_1  64 MKVRTRRLAMNEKDKLRISVFRSNNHIYAQVINDAEGTTVASASSR--SLE-----GGGSNKAAAFEVGKALAEAAKAKGCTNLYFDRessnNKYMYHGRVASLIDGVREGGIE 170
                 56789999********************************999954..555.....6788****************************44334689****************97 PP

>> PF06474.7  MltD lipid attachment motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.1e-05     0.039      22      34 .]      18      30 ..      14      30 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.1e-05
   PF06474.7 22 ivfasaLLsGCQS 34
                +vfa+++L+GC+S
  MMETSP1325-20131115|5541_1 18 VVFAFLALVGCAS 30
                8***********8 PP

>> PF05526.6  Rhodococcus equi virulence-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1    0.0033        11      18      57 ..      17      56 ..       5      79 .. 0.67
   2 ?    7.2   0.1   0.00091       3.1      30      85 ..     106     161 ..      83     162 .. 0.67

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0033
   PF05526.6 18 aaivlllapagvanarvlassatsalqvdsaadsvelaka 57
                 ++ ++la++g+a+a + +s a sal+++ a++s++    
  MMETSP1325-20131115|5541_1 17 RVVFAFLALVGCASAFMSSSFAGSALATERASTSTSTITM 56
                4556678999999999999999999986665555443332 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.00091
   PF05526.6  30 anarvlassatsalqvdsaadsvelakaesnlkvlekkeaeqekqYdVhGvvvSav 85 
                 a++r l+ + ++ ++  +  +    a + ++ + l ++ ++++++Y  hG+v+S++
  MMETSP1325-20131115|5541_1 106 ASSRSLEGGGSNKAAAFEVGKALAEAAKAKGCTNLYFDRESSNNKYMYHGRVASLI 161
                 4444444444444443334444455555566677789999**************86 PP

>> PF10112.4  5-bromo-4-chloroindolyl phosphate hydrolysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   4.5e-05      0.15      32     108 ..      20      92 ..      12      95 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4.5e-05
   PF10112.4  32 sfllslliglgalvvvylakkrrarrkflkeaglsrkeykyirenLkeakkkikrlekalfrvrslkaikqvnellr 108
                 +++l+l+  ++a++ +++a++ +a+++    a  s + + ++r+ Lk  k   +rl ++ +    + +++++n++++
  MMETSP1325-20131115|5541_1  20 FAFLALVGCASAFMSSSFAGSALATER----ASTSTSTITMARNPLKAMKVRTRRLAMNEKDKLRISVFRSNNHIYA 92 
                 456778888888888888888888887....9999***************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       504  (0.0368637); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.46s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 836.28
//
Query:       MMETSP1325-20131115|5544_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.0   0.6       0.17   11.3   0.4    1.3  1  PF11475.3 Virion protein N terminal domain


Domain annotation for each model (and alignments):
>> PF11475.3  Virion protein N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   1.3e-05      0.17      12      27 ..      51      66 ..      49      68 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.3e-05
   PF11475.3 12 HsLtFeeCPKCSALQY 27
                H + F+ CP C AL +
  MMETSP1325-20131115|5544_1 51 HHFYFQLCPACAALNW 66
                8899*********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.27u 0.42s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 349.47
//
Query:       MMETSP1325-20131115|5545_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.085   11.5   0.0      0.098   11.3   0.0    1.0  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.2e-06     0.098     150     196 ..      10      55 ..       4      65 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 7.2e-06
  PF00248.16 150 kkkvkivvvqveynllneleeegllelcaekgvgiiaysplggGllt 196
                 +++ +i+vvq++  ++ + e+e +l +++e++  +  +s+lg+ ++ 
  MMETSP1325-20131115|5545_1  10 RASAPIAVVQNRADPM-MPEQEAVLAAVRELNATFQSFSTLGRQWFA 55 
                 56789***********.*************************98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.25u 0.45s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 353.15
//
Query:       MMETSP1325-20131115|5546_1  [L=383]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.7  21.7       0.13   11.4  15.0    1.2  1  PF04652.11 Vta1 like
       0.53    8.7   2.3       0.79    8.2   1.6    1.1  1  PF06785.6  Uncharacterised protein family (UPF0242)
        1.1    7.4  15.7        1.9    6.6  10.9    1.3  1  PF04632.7  Fusaric acid resistance protein family
        6.8    6.0  11.4         16    4.7   7.9    1.6  1  PF09184.6  PPP4R2


Domain annotation for each model (and alignments):
>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4  15.0   3.9e-05      0.13     195     326 ..     230     366 ..     110     380 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.9e-05
                 .XXXXXXXXXXXXXXXX.XXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.........................................................XXXXXXXXXXXH CS
  PF04652.11 195 ksaeesseslpsdplsa.edsdssap.gldadeasaspseapssspgvpsfpspdeseasnkdsqlPsaPtyaqknssssqsvfPpsseeeetssss.....ppsteapssppvqapsapakpslssakPtaqsassaq 326
                 + +++ + ++ps+ ++a + s+ s++ +++++ as+s s++ sss +++s++s++++++s+++s+++s+P+   ++ssss s +  +s ++ +sss+      p+  ++s++ ++   + +k+  + + P++q++++ +
  MMETSP1325-20131115|5546_1 230 RVSRRRHRPEPSSAVAAiTSSALSFTwSSPSSSASSSASSSASSSSSTSSTSSSTTTSSSSSSSSSSSPPSS--SSSSSSSSSTAATSSSTVSSSSKkrklkEPDDTTDSAKGTNGTGSASKKGRNGKTPKKQQDPTGK 366
                 333344444444445544444443331334444444444444444444444456666666666666666633..22222222222222222222222123322222223333333333333333333333333333322 PP

>> PF06785.6  Uncharacterised protein family (UPF0242)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.6   0.00023      0.79     138     191 ..       9      62 ..       3      75 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00023
   PF06785.6 138 rlkeenqclklqldalvqecrekeeesqelnrelaetlayqqalndeyqatfse 191
                  l ++n+ l  ql+ +  e +e e+e  + n  l+etl   + lnde qa    
  MMETSP1325-20131115|5546_1   9 ALANQNHSLSRQLEVVDFEWSECELELAQTNMALEETLMALNFLNDENQAMAQR 62 
                 577899*******************************************97654 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  10.9   0.00056       1.9     187     337 ..       7     157 ..       2     160 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00056
   PF04632.7 187 rarlaadilaleallsfaafesprlrarvralrallarllallallsslarllaalraaaaatppelaalldelaaalaaeeleaavaaLrarlaalrpeaeadsdtaaallarlaellaeladalaalralqaaiaa.rrparlarhrdhg 337
                 +++la +   l+ +l+ + fe ++   + ++ + +l+++l++l  l    + +a++ ++a++++++ a +l++++ ++a++    ++a + ++l +   e+e++s t ++l  +la++ +++++a ++++  +a+  + +++ar+++hrdh+
  MMETSP1325-20131115|5546_1   7 LMALANQNHSLSRQLEVVDFEWSECELELAQTNMALEETLMALNFLNDENQAMAQREREAQREWDA-AMALAKAEWSAAMANMTIDLAVANDALSQCGLELERASVTTEVLNDALATRSEHAMHAMRESKLDDADGMQtDDHARVTDHRDHT 157
                 678999999*************************************************99999875.444444444455666666666667777777777777778********************99999888877779**********97 PP

>> PF09184.6  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   7.9    0.0048        16     191     283 ..     267     360 ..     240     365 .. 0.56

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0048
   PF09184.6 191 deeed.dpkeslsngsslnespdssqdkekkleeyyekesseaaadeddeakdsdvknkkaddeedddedsdyieekelkedeeedeteeeeee 283
                 +   +   ++  s++ss++ s++ss+ ++++   + +++ss+++   +++++ s+  +k + +e+dd++ds++  + +   ++++ + ++ +++
  MMETSP1325-20131115|5546_1 267 ASSSAsSSSSTSSTSSSTTTSSSSSSSSSSSPPSSSSSSSSSSSTAATSSSTVSSSSKKRKLKEPDDTTDSAKGTNGTGSASKKGRNGKTPKKQ 360
                 3333312233344444455455555555555534433333333333333333455558888899999999998777777777776666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1384  (0.101229); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                       154  (0.0112639); expected 13.7 (0.001)
Passed Fwd filter:                        46  (0.00336454); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.40u 0.44s 00:00:01.84 Elapsed: 00:00:00.83
# Mc/sec: 1105.79
//
Query:       MMETSP1325-20131115|5550_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.60
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|5552_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        71  (0.0051931); expected 273.4 (0.02)
Passed bias filter:                       69  (0.00504681); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 235.20
//
Query:       MMETSP1325-20131115|5555_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 366.50
//
Query:       MMETSP1325-20131115|5554_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.066   13.0   0.0        0.1   12.4   0.0    1.3  1  PF00969.14 Class II histocompatibility antigen, beta domain


Domain annotation for each model (and alignments):
>> PF00969.14  Class II histocompatibility antigen, beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.6e-06       0.1      26      64 ..      46      83 ..      42      85 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.6e-06
                EEEETT---EEESS----HHHHHHHTSHHHHHHHCCCTT CS
  PF00969.14 26 vrFdsdvGefvavtelGrkeaeywNsqkelLeqkraevd 64
                + Fds++Ge++ ++++  ++a  w    + L+  r++ d
  MMETSP1325-20131115|5554_1 46 AIFDSELGEMREYSPFMDYNAMLWT-PATTLDAYRQAFD 83
                67**********************7.5566666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 666.19
//
Query:       MMETSP1325-20131115|5549_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-74  247.3  14.4    3.8e-42  142.5   2.8    3.3  3  PF03382.9 Mycoplasma protein of unknown function, DUF285
  ------ inclusion threshold ------
      0.059   12.6   1.7        6.5    5.9   0.0    3.1  3  PF03220.8 Tombusvirus P19 core protein


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.021   1.4e+02      36      50 ..      34      48 ..      31      65 .. 0.55
   2 !  117.9   1.9   2.2e-38   1.5e-34      22     117 ..      66     161 ..      53     162 .. 0.95
   3 !  142.5   2.8   5.5e-46   3.8e-42       2     117 ..     146     261 ..     145     265 .. 0.97

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.021
   PF03382.9 36 kkfnqdiskWdtsnV 50
                k++  +i +W+ts+ 
  MMETSP1325-20131115|5549_1 34 KQLYGPIASWNTSEA 48
                455556666666655 PP

  == domain 2    score: 117.9 bits;  conditional E-value: 2.2e-38
   PF03382.9  22 tsnvtdmssmFsgakkfnqdiskWdtsnVtnmsemFsgatsfnqdiskwntsnVtnmssmFkgatsfnqdissWnvskvtdmssmfenakafnqdl 117
                  s+vt+m+++F+++++fn d+s W t +Vt+m +mF+gatsfn d+s+w++ +V+nm++mF+gatsfn d+s+W+v +v dm  mf+na +fn dl
  MMETSP1325-20131115|5549_1  66 YSQVTSMQRLFERKTSFNGDLSRWSTGQVTDMYRMFHGATSFNGDLSSWDVGRVKNMRQMFQGATSFNGDLSRWDVGQVIDMYCMFANAPSFNGDL 161
                 699*****************************************************************************************9886 PP

  == domain 3    score: 142.5 bits;  conditional E-value: 5.5e-46
   PF03382.9   2 smksmFknassfnqdiskwdtsnvtdmssmFsgakkfnqdiskWdtsnVtnmsemFsgatsfnqdiskwntsnVtnmssmFkgatsfnqdissWnvskvtdmssmfenakafnqdl 117
                 +m+ mF+na sfn d+s wd+ +vt+m  mF+ga+ fn d+s Wd+ +Vt+m++mF++atsfn d+s+w++ +Vt+m++mF gatsfn d+ssW+v +vt+m++mf++a++fn +l
  MMETSP1325-20131115|5549_1 146 DMYCMFANAPSFNGDLSGWDVGRVTNMGIMFQGATLFNGDLSRWDVGQVTHMQYMFADATSFNCDLSNWDVGRVTHMHHMFIGATSFNCDLSSWDVGQVTHMQYMFADATSFNRQL 261
                 7999*************************************************************************************************************986 PP

>> PF03220.8  Tombusvirus P19 core protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.017   1.1e+02      62     105 ..      88     129 ..      72     154 .. 0.76
   2 ?    5.9   0.0   0.00095       6.5      62     113 ..     188     237 ..     181     238 .. 0.90
   3 ?    2.7   0.0     0.009        61      62      97 ..     238     272 ..     236     276 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.017
   PF03220.8  62 swsfGkvvfkrylrydrkeaslhrvlgswegdtvntaasrflGv 105
                  ws G+v     +r  +  +s++  l sw+  +v++    f G 
  MMETSP1325-20131115|5549_1  88 RWSTGQVT--DMYRMFHGATSFNGDLSSWDVGRVKNMRQMFQGA 129
                 57777764..3456666778888888999888888777777665 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.00095
   PF03220.8  62 swsfGkvvfkrylrydrkeaslhrvlgswegdtvntaasrflGvnqvgctys 113
                  w +G+v   +y+  d   +s++  l  w+  +v +    f+G    +c  s
  MMETSP1325-20131115|5549_1 188 RWDVGQVTHMQYMFADA--TSFNCDLSNWDVGRVTHMHHMFIGATSFNCDLS 237
                 6***********99886..699999*******************99999765 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.009
   PF03220.8  62 swsfGkvvfkrylrydrkeaslhrvlg.swegdtvnt 97 
                 sw +G+v   +y+  d   +s++r lg +w g t  +
  MMETSP1325-20131115|5549_1 238 SWDVGQVTHMQYMFADA--TSFNRQLGgAWGGGTAVD 272
                 8***********99886..799999963798877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.38s 00:00:01.02 Elapsed: 00:00:00.53
# Mc/sec: 1483.03
//
Query:       MMETSP1325-20131115|5553_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 412.99
//
Query:       MMETSP1325-20131115|5558_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 230.59
//
Query:       MMETSP1325-20131115|5557_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|5556_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.036   13.6   2.1      0.063   12.8   1.4    1.3  1  PF02788.11 Ribulose bisphosphate carboxylase large chain, N-terminal domain
       0.15   11.1   3.6       0.19   10.8   2.5    1.1  1  PF11593.3  Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF02788.11  Ribulose bisphosphate carboxylase large chain, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.4   9.3e-06     0.063      21      58 ..       8      46 ..       3      53 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 9.3e-06
                EEEE------HHHH.HHHHHHT----SS--SSTSS---. CS
  PF02788.11 21 rvtPqagvdpveaa.aavaaesstgtwtvvwtDlltald 58
                  tPq+  ++ +aa aa aa s+t+++ ++   ++t+l 
  MMETSP1325-20131115|5556_1  8 TTTPQHRRQQANAAaAAAAAASATAAVRTCCHHHFTSLH 46
                6789998877766515667889999***********984 PP

>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.5   2.8e-05      0.19     189     244 ..       6      63 ..       2     105 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.8e-05
   PF11593.3 189 ttakkprkprqtkkaaaaakkqasaqaqaqasaynqnssl.nvsqnasmqaqiPn.pt 244
                 +++  p+++rq+  aaaaa + asa a++ +  + + +sl  ++q +s + ++P  +t
  MMETSP1325-20131115|5556_1   6 AATTTPQHRRQQANAAAAAAAAASATAAVRTCCHHHFTSLhYTPQLTSPRHATPRyTT 63 
                 455568888899999******************99999*98899*********99522 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       712  (0.0520772); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.68
# Mc/sec: 736.53
//
Query:       MMETSP1325-20131115|5559_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 377.30
//
Query:       MMETSP1325-20131115|5560_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-09   34.9   0.1    1.1e-08   34.8   0.0    1.1  1  PF01900.14 Rpp14/Pop5 family


Domain annotation for each model (and alignments):
>> PF01900.14  Rpp14/Pop5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.0   7.9e-13   1.1e-08      53     106 ..       3      56 ..       1      57 [. 0.93

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 7.9e-13
  PF01900.14  53 spktstgilRcaresyrlvwaaLtlitsiegkpviirvlkvSGTikkaeekair 106
                 + +t+ +++Rc+re +r+vw +Ltl t ++g ++++rvl+  G+ ++++ +a+r
  MMETSP1325-20131115|5560_1   3 EARTGIFVVRCDREVVREVWGSLTLTTVVNGAEAALRVLNNAGSARTCRPAALR 56 
                 678999******************************************987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 371.20
//
Query:       MMETSP1325-20131115|5561_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|5564_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 291.73
//
Query:       MMETSP1325-20131115|5566_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   13.3   0.0      0.083   12.6   0.0    1.4  1  PF05026.8 Dcp2, box A domain


Domain annotation for each model (and alignments):
>> PF05026.8  Dcp2, box A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   6.1e-06     0.083      20      78 ..      30      91 ..      21      96 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.1e-06
                SS-HHHHHHHH..HHHHHHHHHTTTTT-TTS-----HHHHHHHHHH-THHHHH.HT--HHHH CS
   PF05026.8 20 lssvervlFqv..eeAhWfYeDflrelnpslpslslreFakqllekcpllqkf.kedleeal 78
                +++  r +F++  +  + f  D+l el+p+l ++ +   +k++lek+pl+ +  + ++e+al
  MMETSP1325-20131115|5566_1 30 IQENVREFFHLtyKDGQVFGRDVLDELTPQLRRQIVAYNSKEILEKVPLFAECeTGKVEQAL 91
                567788899873357899********************************999767777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       514  (0.0375951); expected 273.4 (0.02)
Passed bias filter:                      452  (0.0330603); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|5567_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 465.18
//
Query:       MMETSP1325-20131115|5569_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 893.64
//
Query:       MMETSP1325-20131115|5570_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|5571_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 244.33
//
Query:       MMETSP1325-20131115|5568_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-26   91.8   0.0    4.5e-26   91.0   0.0    1.4  1  PF08534.5  Redoxin
    1.1e-09   37.9   0.0    2.1e-09   36.9   0.0    1.5  2  PF00578.16 AhpC/TSA family


Domain annotation for each model (and alignments):
>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.0   6.5e-30   4.5e-26       1     145 [.      22     176 ..      22     177 .. 0.95

  Alignments for each domain:
  == domain 1    score: 91.0 bits;  conditional E-value: 6.5e-30
                 X--------S-----TT---EEHHH.HTTSEEEEE---------IIIIIH..HHHTHHHH.HH----EEEEE-SS-HHHHHHHHH.........TT.TSEEE------HHHHHT..-EE-----.-EE--EEEEEE---EEEEEE-SSTTS----TTT CS
   PF08534.5   1 kaGdkaPdftlplvatdgktvslsd.fkgkkvvlvfvpgafcptCsaehp..yleklaklakekgvdvvavvaqndafvkeawak.........eglkipvlsDesasfakalglrltedasag.irtpryavidedgkvvylevepepgeesdaeav 145
                 k+Gd+aP + l+ + +d +++++++ f   k+vlv vpgaf+ptCs++h+  +le+l +l +++gvd ++++a+nd fv++aw++          +lk  +++D+ + +a+++g  l  d++++  r+ r av+ edg+v y++v +  +ees+a+++
  MMETSP1325-20131115|5568_1  22 KVGDSAPPVGLTRAVDDVEDTTVNSlFGSGKTVLVNVPGAFTPTCSEKHVtgFLENLGAL-QDEGVDNLYIMAVNDRFVMRAWDDsleldsyreADLKPELIADGAGMIAASMG--LLVDKGDMgGRAIRSAVVFEDGVVQYVGVDAGQPEESSADTI 176
                 69************************999999*************************999.*********************************9999****************..6788888889*********************99779999986 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   3.1e-13   2.1e-09       1     123 [.      23     160 ..      23     161 .. 0.89
   2 ?   -3.2   0.0      0.81   5.5e+03      43      65 ..     203     225 ..     196     236 .. 0.70

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 3.1e-13
  PF00578.16   1 vgdkapdfelk..dtdgkkvslsdl..kgkpvvLffypkdfcpvCt.telpalaelyeefkkkgv.evigvsvdspeshkkfaekne........lnfpllsDeegevakaygvlnee...kglalratfvidkegkiry 123
                 vgd ap   l+    d ++ +++ l  +g ++vL+ +p++f+p C  +++  + e++  ++++gv +++++ v++ + ++++ ++ e        l+ +l++D  g +a ++g+l ++    g a+r+++v+  +g+++y
  MMETSP1325-20131115|5568_1  23 VGDSAPPVGLTraVDDVEDTTVNSLfgSG-KTVLVNVPGAFTPTCSeKHVTGFLENLGALQDEGVdNLYIMAVNDRFVMRAWDDSLEldsyreadLKPELIADGAGMIAASMGLLVDKgdmGGRAIRSAVVFE-DGVVQY 160
                 79999999999653345778888885566.8899999999*****999*****************77888888********************************************9998888999998887.799998 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 0.81
  PF00578.16  43 telpalaelyeefkkkgvevigv 65 
                 +e+ a a+++ e+++ +++ +++
  MMETSP1325-20131115|5568_1 203 AEAAAAAAAAAEMDEPDTKAVAI 225
                 56666677777777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1189  (0.0869661); expected 273.4 (0.02)
Passed bias filter:                      667  (0.0487858); expected 273.4 (0.02)
Passed Vit filter:                        81  (0.00592452); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.41s 00:00:01.05 Elapsed: 00:00:00.53
# Mc/sec: 1107.75
//
Query:       MMETSP1325-20131115|5573_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-11   41.3   1.7    4.3e-06   26.2   0.1    2.6  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.1   3.2e-10   4.3e-06      12      39 .]       4      31 ..       2      31 .. 0.96
   2 !   13.8   0.1   2.7e-06     0.036       4      38 ..      38      77 ..      35      78 .. 0.91

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 3.2e-10
                SSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27 12 spVtcvafspdgpllasgSrDgtirlWd 39
                ++Vt + ++p+ p+++++ +Dg +rlWd
  MMETSP1325-20131115|5573_1  4 AAVTKMVWHPTLPVVITSAADGVVRLWD 31
                68*************************9 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 2.7e-06
                EEEEESSSSSEEEEEEESS.....STEEEEEETTSEEEEE CS
  PF00400.27  4 katlrgHtspVtcvafspd.....gpllasgSrDgtirlW 38
                ++ ++gHt+ V +va +         l++s+S+D+t r++
  MMETSP1325-20131115|5573_1 38 VSDYKGHTDMVLDVAGCWGagqggVDLVLSASDDHTARVF 77
                677899999999999999999999**************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|5575_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.65
# Mc/sec: 291.25
//
Query:       MMETSP1325-20131115|5577_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 222.52
//
Query:       MMETSP1325-20131115|5579_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   11.5   0.0        0.2   10.9   0.0    1.2  1  PF00392.16 Bacterial regulatory proteins, gntR family


Domain annotation for each model (and alignments):
>> PF00392.16  Bacterial regulatory proteins, gntR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.5e-05       0.2       5      32 ..      51      78 ..      48      83 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.5e-05
  PF00392.16  5 vyerLredIlsgelrpGdkLPsereLaa 32
                v e L + + +g ++p  kLP+ ++La+
  MMETSP1325-20131115|5579_1 51 VRETLIRSLEAGKFTPCRKLPKTESLAD 78
                88999*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 526.16
//
Query:       MMETSP1325-20131115|5580_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 334.59
//
Query:       MMETSP1325-20131115|5581_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-15   53.7   0.5    3.3e-12   45.6   0.2    2.4  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.2   2.4e-16   3.3e-12       4      39 .]      44      79 ..      42      79 .. 0.96
   2 !    5.8   0.0   0.00089        12      16      35 ..     101     120 ..      96     121 .. 0.86

  Alignments for each domain:
  == domain 1    score: 45.6 bits;  conditional E-value: 2.4e-16
                EEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  4 katlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                + +lr+Ht+ V+c  fspdg++la++S+D t+ +Wd
  MMETSP1325-20131115|5581_1 44 VCVLRAHTDEVWCAEFSPDGRYLATASADLTVIIWD 79
                579********************************9 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.00089
                 EEEEESSSTEEEEEETTSEE CS
  PF00400.27  16 cvafspdgpllasgSrDgti 35 
                  va+sp +  l++ ++ +t+
  MMETSP1325-20131115|5581_1 101 MVAWSPKSDKLLTVGESSTV 120
                 59************998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 628.01
//
Query:       MMETSP1325-20131115|5583_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-28   98.0   0.0    3.8e-28   97.7   0.0    1.0  1  PF00719.14 Inorganic pyrophosphatase


Domain annotation for each model (and alignments):
>> PF00719.14  Inorganic pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   0.0   2.8e-32   3.8e-28      40     154 ..       2     132 ..       1     133 [. 0.93

  Alignments for each domain:
  == domain 1    score: 97.7 bits;  conditional E-value: 2.8e-32
                 --BTT---...........-----BEEEE--SS---TTEEEEEEE---EEEEE---BEEEEEEEETT-CCG.T..T--SGGGS-HHHHHHHHHHHHHTTTTS..TT--EEE--B--HHHHHHHHHHHHHHH CS
  PF00719.14  40 Gfipqtle...........gDgDplDvlvlgseplapgsvvkvrvlGvlaliDegetDdKilavpvedpey.k..dikdvedlppgllkeieefFetykdle..enkfvkvegwkdaeeAlkvieeaiery 154
                 G +pqt+e           gD+DplDv+++gs pla+gsvv+v+vlG+l+liDegetD K+++ +++dp + +  d+ ++e+++pg+++++ ++ ++yk++e    ++++ e+  + e++ +++ e+ er+
  MMETSP1325-20131115|5583_1   2 GLLPQTWEdpsncnaegicGDDDPLDVMEVGSGPLAMGSVVPVKVLGTLELIDEGETDYKVIVLRADDPDAyRinDMASLEQVKPGTTTRLVDWLKKYKTAEgkGLNTLASETPYSIERSYEIMAECNERW 132
                 89*****************************************************************998854679999**********************8754456689999999**********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.59
# Mc/sec: 613.30
//
Query:       MMETSP1325-20131115|5578_1  [L=438]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-10   38.3   5.2      1e-09   37.7   3.6    1.2  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    9.9e-09   34.7   5.6    1.5e-08   34.1   3.9    1.3  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    4.9e-08   32.4   6.2    7.5e-08   31.8   4.3    1.3  1  PF13639.1  Ring finger domain
    3.5e-07   29.6   7.4    5.3e-07   29.0   5.2    1.3  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
     0.0017   17.7   0.8     0.0032   16.9   0.6    1.4  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
  ------ inclusion threshold ------
       0.12   12.4   4.5        0.3   11.1   3.1    1.7  1  PF12678.2  RING-H2 zinc finger
       0.47   10.3   5.7        1.4    8.8   3.9    1.8  1  PF11793.3  FANCL C-terminal domain
       0.94    8.6  12.0        1.8    7.7   8.3    1.5  1  PF05308.6  Mitochondrial fission regulator
        6.3    6.3   7.6       0.48   10.0   1.2    2.1  2  PF04360.7  Serglycin


Domain annotation for each model (and alignments):
>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   3.6   6.9e-13     1e-09       2      48 ..     255     305 ..     254     306 .. 0.95

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 6.9e-13
   PF13920.1   2 kktCvvClereadvlllpCgHlclCeeCaerllk......rkkkCpiCrspie 48 
                 +++C++C++++ +v+l pC H+ +C++C +++lk      + ++Cp+C ++i+
  MMETSP1325-20131115|5578_1 255 DNECIICMDSPVEVVL-PCTHA-FCNQCLQEVLKdaetsaTGAECPYCSRDIS 305
                 689***********96.*****.***************************997 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   3.9     1e-11   1.5e-08       3      45 ..     256     301 ..     254     302 .. 0.90

  Alignments for each domain:
  == domain 1    score: 34.1 bits;  conditional E-value: 1e-11
   PF13923.1   3 fsCpiCleelenpviltpCgHlyCkkCieqwleks.....kkkCPiCr 45 
                  +C iC++ + +  + +pC H +C++C++++l+ +      ++CP C 
  MMETSP1325-20131115|5578_1 256 NECIICMDSPVEV-V-LPCTHAFCNQCLQEVLKDAetsatGAECPYCS 301
                 69*********97.4.9*****************888777778****7 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   4.3   4.9e-11   7.5e-08       1      45 [.     256     302 ..     256     303 .. 0.82

  Alignments for each domain:
  == domain 1    score: 31.8 bits;  conditional E-value: 4.9e-11
   PF13639.1   1 deCaiCldelsegeevvrlpCgHvfHeeCldewlrssn......sCPlCrk 45 
                 +eC iC+d+  e    v+lpC H f+ +Cl+e l+         +CP+C +
  MMETSP1325-20131115|5578_1 256 NECIICMDSPVE----VVLPCTHAFCNQCLQEVLKDAEtsatgaECPYCSR 302
                 59*******976....9*****************6532234556*****86 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   5.2   3.5e-10   5.3e-07       1      41 []     258     300 ..     258     300 .. 0.91

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 3.5e-10
                 -TTTSSS-SSEE.BSCTS-EE-CHHHHHHHCS....T-----TTT CS
  PF00097.20   1 CpiCleeakepnelleCkHsfCskCirkilks....rkkvkCPlC 41 
                 C+iC++ ++e +  l+C+H+fC++C++++lk+     +  +CP C
  MMETSP1325-20131115|5578_1 258 CIICMDSPVEVV--LPCTHAFCNQCLQEVLKDaetsATGAECPYC 300
                 **********77..*****************9987666666**99 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.6   2.1e-06    0.0032      27      58 .]     268     299 ..     255     299 .. 0.79

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 2.1e-06
                 EEES---EEEHHHHHHHHHHHHTTT--B---- CS
   PF13445.1  27 vvLpCGhvisrealeklakggrsnkgrfkCPy 58 
                 vvLpC h ++ ++l++ +k+   +++   CPy
  MMETSP1325-20131115|5578_1 268 VVLPCTHAFCNQCLQEVLKDAETSATGAECPY 299
                 59*****************6666677899998 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.1    0.0002       0.3      38      75 .]     263     301 ..     249     301 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.0002
   PF12678.2  38 apgksdecpvawgeCgHaFHlhCiskWlktrk......tCPlcr 75 
                  +     ++v++  C+HaF  +C+++ lk ++      +CP c+
  MMETSP1325-20131115|5578_1 263 DSP----VEVVL-PCTHAFCNQCLQEVLKDAEtsatgaECPYCS 301
                 333....44554.6**************9877788999****95 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   3.9   0.00091       1.4      28      67 ..     272     306 ..     255     308 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00091
                 ----B-SGGGHHHHHHHH----TTT------TTT-S---G CS
   PF11793.3  28 CnkkfHaaCLkeWlrslkesrqsfdvlfGeCPyCkkkisv 67 
                 C++ f ++CL+e l+  ++s +       eCPyC++ is 
  MMETSP1325-20131115|5578_1 272 CTHAFCNQCLQEVLKDAETSATG-----AECPYCSRDISA 306
                 9999999********99999775.....68******9986 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   8.3    0.0012       1.8     176     208 ..     121     155 ..     101     185 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0012
   PF05308.6 176 visdpteepelevp..pppppPpPlpavslqqsas 208
                  +s  + +p++ vp  pppppPpP+p++s  ++ s
  MMETSP1325-20131115|5578_1 121 SSSGSSGTPSSPVPppPPPPPPPPPPPPSRSPPLS 155
                 33333334444444113333444444444444444 PP

>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.2   0.00032      0.48      86     111 ..     227     252 ..     210     262 .. 0.79
   2 ?   -2.2   0.3       1.8   2.8e+03     100     110 ..     374     384 ..     344     391 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00032
   PF04360.7  86 plsedysgsgsgsGsGsGsgsGsGfl 111
                 p se      +   sGsGsgsGsG+l
  MMETSP1325-20131115|5578_1 227 PTSEGTGAQTFAELSGSGSGSGSGSL 252
                 66777766777777888888888887 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 1.8
   PF04360.7 100 sGsGsgsGsGf 110
                 sG Gs  Gs +
  MMETSP1325-20131115|5578_1 374 SGPGSSGGSPS 384
                 33333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.79u 0.35s 00:00:01.14 Elapsed: 00:00:00.60
# Mc/sec: 1749.34
//
Query:       MMETSP1325-20131115|5584_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 1038.42
//
Query:       MMETSP1325-20131115|5587_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 333.92
//
Query:       MMETSP1325-20131115|5586_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   16.1   0.8      0.017   15.4   0.6    1.4  1  PF09177.6  Syntaxin 6, N-terminal
      0.073   12.6   0.2      0.094   12.3   0.1    1.1  1  PF09933.4  Predicted small integral membrane protein (DUF2165)
        0.2   11.7   0.9       0.59   10.2   0.3    1.8  2  PF05008.10 Vesicle transport v-SNARE protein N-terminus


Domain annotation for each model (and alignments):
>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.6   3.7e-06     0.017       8      63 ..       5      60 ..       2      75 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.7e-06
   PF09177.6  8 eevqksidkleslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavs 63
                e+vq++++ +e+l++++  +  dst+ ++l++  + L+n   +i + l++++ + +
  MMETSP1325-20131115|5586_1  5 EKVQDTLEDMEDLIQEMNGEADDSTNGQTLSSVDSHLSNGQAQIHTHLDEMDTTLA 60
                68*************************************************98865 PP

>> PF09933.4  Predicted small integral membrane protein (DUF2165)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   2.1e-05     0.094      37      95 ..      50     105 ..      36     112 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.1e-05
   PF09933.4  37 qhvlsmdttfpaneikyrAitspllqqaayilIivlElltalllliGavallralkasa 95 
                  h+ +mdtt  +n++    ++s+l     +++I+v+ l++all+l+G+++ll ++ a+a
  MMETSP1325-20131115|5586_1  50 THLDEMDTTLASNAVVASDLQSTLS---SLMAITVTSLVVALLALAGVAKLLWSQSATA 105
                 5778899999999998888888765...567899*****************99887766 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.3   0.00013      0.59      27      62 ..       4      40 ..       1      50 [. 0.76
   2 ?    0.4   0.0      0.14   6.5e+02      34      45 ..      45      56 ..      28      76 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00013
  PF05008.10 27 lreiekkldeaeellkqMelEvrnl.psserakykak 62
                + +++  l+++e+l+++M  E+ +    ++ +++ + 
  MMETSP1325-20131115|5586_1  4 VEKVQDTLEDMEDLIQEMNGEADDStNGQTLSSVDSH 40
                789******************9855355666665555 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.14
  PF05008.10 34 ldeaeellkqMe 45
                + ++   l++M+
  MMETSP1325-20131115|5586_1 45 QAQIHTHLDEMD 56
                444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       984  (0.0719719); expected 273.4 (0.02)
Passed bias filter:                      734  (0.0536864); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 569.13
//
Query:       MMETSP1325-20131115|5585_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.67
# Mc/sec: 833.36
//
Query:       MMETSP1325-20131115|5589_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-10   41.0  12.4    1.8e-10   40.3   8.6    1.4  1  PF01753.13 MYND finger
  ------ inclusion threshold ------
       0.52    9.8   7.9        1.1    8.8   5.5    1.6  1  PF04438.11 HIT zinc finger


Domain annotation for each model (and alignments):
>> PF01753.13  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   8.6   2.7e-14   1.8e-10       5      40 .]       9      45 ..       3      45 .. 0.88

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 2.7e-14
                --..B----EE----S--EESSHHHHHHHHHHHTTTH CS
  PF01753.13  5 gk.aealkllrCsgCksvkYCskeCQradwkeHkkeC 40
                +   +  kll+Cs+C++++YCskeCQ+ + ++Hk+ C
  MMETSP1325-20131115|5589_1  9 EAhGRDVKLLKCSRCHNAWYCSKECQKLHYPAHKTIC 45
                4444578999*************************** PP

>> PF04438.11  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.5   0.00016       1.1      15      30 .]      19      35 ..       3      35 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00016
  PF04438.11 15 kCpkCntr.yCSLrCyk 30
                kC++C+   yCS +C k
  MMETSP1325-20131115|5589_1 19 KCSRCHNAwYCSKECQK 35
                8*****999******87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       723  (0.0528818); expected 273.4 (0.02)
Passed bias filter:                      472  (0.0345231); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 710.35
//
Query:       MMETSP1325-20131115|5591_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.64
# Mc/sec: 554.16
//
Query:       MMETSP1325-20131115|5593_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-05   23.6   0.8    3.1e-05   22.8   0.5    1.5  1  PF00036.27 EF hand
    0.00012   21.1   0.5    0.00024   20.1   0.4    1.5  1  PF13202.1  EF hand
    0.00025   20.5   0.8    0.00045   19.7   0.5    1.4  1  PF13405.1  EF-hand domain
     0.0024   17.8   0.0     0.0036   17.2   0.0    1.3  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.031   14.5   1.5      0.049   13.9   1.1    1.3  1  PF05957.8  Bacterial protein of unknown function (DUF883)
       0.13   11.2   0.0       0.16   10.9   0.0    1.0  1  PF13206.1  Trypanosomal VSG domain
       0.14   11.6   0.4       0.25   10.8   0.3    1.4  1  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.5   1.6e-08   3.1e-05       2      28 ..      74     100 ..      73     101 .. 0.92

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 1.6e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 ++e+F+e+D D++G ++  E+k++l +
  MMETSP1325-20131115|5593_1  74 ADEVFDEIDADKNGVLDHGELKTFLGR 100
                 79*********************9976 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.4   1.2e-07   0.00024       3      25 .]      76      98 ..      74      98 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.2e-07
                HHHHHH--S----B-HHHHHHHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreELkrlv 25
                ++F+++D+++ G +++ ELk+++
  MMETSP1325-20131115|5593_1 76 EVFDEIDADKNGVLDHGELKTFL 98
                48******************985 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.5   2.3e-07   0.00045       3      28 ..      75     100 ..      73     107 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 2.3e-07
                 H---GCC-------B---HHHHHHH. CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLrk 28 
                  e+F+ +D d++G +d  EL+ +L +
  MMETSP1325-20131115|5593_1  75 DEVFDEIDADKNGVLDHGELKTFLGR 100
                 69*********************997 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   1.9e-06    0.0036       3      35 ..      75     108 ..      68     132 .. 0.79

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.9e-06
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgsels.d 35 
                  e+F+++D d++g ld  eL+ +l +++  ++ d
  MMETSP1325-20131115|5593_1  75 DEVFDEIDADKNGVLDHGELKTFLGRMLLGKRdD 108
                 578********************99988877742 PP

>> PF05957.8  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   1.1   2.5e-05     0.049      22      87 ..       3      68 ..       1      70 [. 0.92

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.5e-05
   PF05957.8 22 adeageeaeelReraeealerarerlrdaedavrerakeaaeaadeyVrenPwqavGiAagvGlll 87
                ++ ++  a + +e+ ++a++++ +++  a  +v+++a++++ +++e V +n   ++  Aagv++++
  MMETSP1325-20131115|5593_1  3 EKLSKTAAPDWKEEWDHAAQEVVDSVLSALAQVQAQAQRVVVDVREQVLANSSSTLPEAAGVAIVA 68
                56778888889999999**********************************************996 PP

>> PF13206.1  Trypanosomal VSG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.1e-05      0.16      65     170 ..      11     113 ..       2     131 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8.1e-05
   PF13206.1  65 aewlkkfdeetddetwgekkkkkak......akWkaaakalkkkakekeekkssnsslstaakqkakqlaekAaklkeeiektrtkalaassaekkllkAlyGdakepeene 170
                 ++          +e+w++ +++  +      a+ +a+a+++  + +e+ + +ss++ +  a  + +++  + A ++ +ei+++++  l   ++++ l + l G+ ++++  +
  MMETSP1325-20131115|5593_1  11 PD---------WKEEWDHAAQEVVDsvlsalAQVQAQAQRVVVDVREQVLANSSSTLPEAAGVAIVASFKGDADEVFDEIDADKNGVLDHGELKTFLGRMLLGKRDDQPVRA 113
                 22.........2333333333333366666778888888888877789*********************************99999999999************99988776 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.3   0.00013      0.25      26      48 ..      73      95 ..      71     101 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00013
   PF13833.1 26 evdilfrefDtdgdGkisfeEFc 48
                ++d++f+e+D+d++G ++  E +
  MMETSP1325-20131115|5593_1 73 DADEVFDEIDADKNGVLDHGELK 95
                6899************9966655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       565  (0.0413253); expected 273.4 (0.02)
Passed bias filter:                      450  (0.032914); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 670.00
//
Query:       MMETSP1325-20131115|5594_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 336.41
//
Query:       MMETSP1325-20131115|5592_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-39  135.9   0.1    2.3e-39  135.4   0.1    1.2  1  PF11831.3 pre-mRNA splicing factor component
  ------ inclusion threshold ------
        0.1   11.4   0.2       0.59    8.9   0.0    2.0  2  PF10186.4 UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF11831.3  pre-mRNA splicing factor component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.4   0.1   3.4e-43   2.3e-39     186     364 .]       4     184 ..       1     184 [. 0.89

  Alignments for each domain:
  == domain 1    score: 135.4 bits;  conditional E-value: 3.4e-43
   PF11831.3 186 eelrkrsqviqrnLPRPseldksnLrpkenvedeeldeaeklikkEmllLlknDalkyPl......kgkkpkgk....aspledfedeeleeArklieaEleklkeemgeqeesleeideaweelneqvlflpsqnaytdaeeasekdrieslkekleklrkkiekeaekakklEkklkiltgGYqkRa 364
                 + l++r+ +++r+LPRPs +d s L  +  ++d++  +a+ l++ Em+ Ll++Da+kyP+      k+k    k    a+ l ++ d el++Ar++++aEl+ l   ++++e    ++ e+wee + ++ +lp ++ay   + as+ +r++sl++++e lr+++++ a++a+klE kl + t+GY+ Ra
  MMETSP1325-20131115|5592_1   4 AFLSRRNAAVRRDLPRPSTVDAS-LG-QARETDTDAGKADGLVRSEMVVLLNHDAAKYPVkkpgakKEK----KrkrkAEDLPQIPDAELAAAREMVAAELKLLV--ADNGEVPATKFAEVWEETKGEFAYLPDRKAYGPLSTASASERMSSLQHEFEALREHMAAHAQRAAKLEGKLRVKTAGYEGRA 184
                 5689****************977.55.5888999**************************764333333....355569**********************8766..5555666779*********************************************************************996 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   8.6e-05      0.59      65     113 ..     138     187 ..     118     196 .. 0.89
   2 ?   -0.1   0.0     0.048   3.3e+02     100     136 ..     219     255 ..     208     265 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 8.6e-05
   PF10186.4  65 vaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.asaql 113
                 +as +er++ +++  e+l+e++ +  +r ++l+ +l+ +    e + +ql
  MMETSP1325-20131115|5592_1 138 TASASERMSSLQHEFEALREHMAAHAQRAAKLEGKLRVKTAGYEgRADQL 187
                 68899*****************************9999988777666665 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.048
   PF10186.4 100 laqrrsdleasaqlekrraeqlaklqeeikrtkskln 136
                 l qr  dl   a+le++r+ +l+k + ++ + ++ l 
  MMETSP1325-20131115|5592_1 219 LPQRTADLYDLAKLEQERNMELQKEYSALIKERDYLY 255
                 5555555555666666666666666666666555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       544  (0.0397894); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1151.93
//
Query:       MMETSP1325-20131115|5596_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.59
# Mc/sec: 259.94
//
Query:       MMETSP1325-20131115|5598_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 357.35
//
Query:       MMETSP1325-20131115|5600_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:01.07
# Mc/sec: 206.04
//
Query:       MMETSP1325-20131115|5601_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.15s 00:00:00.43 Elapsed: 00:00:00.53
# Mc/sec: 230.59
//
Query:       MMETSP1325-20131115|5599_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-27   95.0   0.3    2.5e-27   94.3   0.2    1.3  1  PF00707.17 Translation initiation factor IF-3, C-terminal domain
    1.6e-22   79.1   0.2    4.2e-22   77.7   0.2    1.7  1  PF05198.11 Translation initiation factor IF-3, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00707.17  Translation initiation factor IF-3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.2   3.6e-31   2.5e-27       2      87 ..     122     206 ..     121     207 .. 0.96

  Alignments for each domain:
  == domain 1    score: 94.3 bits;  conditional E-value: 3.6e-31
  PF00707.17   2 vevKEiklrpkidehDlevKlkqakkFLekgdkVkvtirfrGReiahkelgkevldrvaeelediakvekkpklegrqmtmilapk 87 
                  e+KE+k+++ki++hD++v+ ++a+kFL++g +Vk +++frGRe+++ +lg ++l+++ae++++i++ ek pk eg++m+m+++p 
  MMETSP1325-20131115|5599_1 122 NELKEVKMSYKIESHDYQVRRRNAEKFLNSGSRVKAVVQFRGREQQYMNLGVDLLNKLAEDVSSIGNGEK-PKREGNRMIMFINPI 206
                 589****************************************************************998.58**********995 PP

>> PF05198.11  Translation initiation factor IF-3, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.7   0.2   6.2e-26   4.2e-22       5      74 ..      40     114 ..      36     116 .. 0.90

  Alignments for each domain:
  == domain 1    score: 77.7 bits;  conditional E-value: 6.2e-26
  PF05198.11   5 riNeeIrareVrli.....dedgeqlGvvstreAlrlAeekglDLVevspnakpPvckimdYgkfkYeqkkkkke 74 
                  +Ne+I+a+  r++     de +e+lGv+s++eA ++A+e + DLV++sp+++pPvcki+dYgk kY+  +kkk+
  MMETSP1325-20131115|5599_1  40 PMNEKIKADPLRVViakggDEGDEMLGVISLQEARAKAQELEKDLVMISPKSDPPVCKIVDYGKLKYQMDRKKKD 114
                 69***********95555444557888**********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       864  (0.0631949); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.65
# Mc/sec: 932.74
//
Query:       MMETSP1325-20131115|5603_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.66
# Mc/sec: 486.53
//
Query:       MMETSP1325-20131115|5606_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|5605_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-61  205.9   0.0    9.4e-61  205.3   0.0    1.3  1  PF04857.15 CAF1 family ribonuclease


Domain annotation for each model (and alignments):
>> PF04857.15  CAF1 family ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.3   0.0   6.9e-65   9.4e-61       1     262 []      51     277 ..      51     277 .. 0.98

  Alignments for each domain:
  == domain 1    score: 205.3 bits;  conditional E-value: 6.9e-65
                 EEE-TTTHHHHHHHHHHHTTTS-EEE---B------------SSSHHHHHHHHHHHHHHS---EE--EEE.-------TT-SEEEEE--.--TTTS---HHHHHHHHH----HHHHHH----HHHHH......HHH------S-T.T..-EEEES----HHHHHHHHHH-.---SSHHHHHHHHHHHSSSEEEHHHHHT..T....--HHHHHHTT---.......................---.TT----HHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF04857.15   1 teVnrsNfkeelkeirqaiksadfvaiDtEftGlvakaelsrkdtlderYealrknakslkilqlGlalfkkedskltdsveispfnfkefskeedfsstsslefLaeqgfdFnklireGveylrfneeeekkqllgvrllfdeiikskktvvghnglyDllylykllyg.dLPesldeFkkkltelFprvyDtkylaetnegssedlqelaeelkadrnekkktksketqnfieeknnmlivgeglheAGsDslltallfik 262
                 ++V++ N++ee+ +ir+ +++++fv++DtEf+G+va++++  +   d++Y+++r+n++ lki+qlG+ ++ +e+++ ++   +++fnfk fs  ed+++++s+++L+ +g+dF  ++ +G+++  f       +l+++++l++ + +  +++v+++++yD++yl+kll++  LP+s ++F++ l+ +Fp +yD+k +    +g + +lq++ e+ +a+r                       +g   h+AGsD+llt+ +f+k
  MMETSP1325-20131115|5605_1  51 RDVWKGNLEEEMCNIRKIVDDYPFVSMDTEFPGVVARPITD-QYAHDYQYQTVRCNVDLLKIIQLGIGFV-NEKGEHPEGCVAWQFNFK-FSLTEDMYAQDSIDLLKDAGIDFAMHESDGIDVTYFG------ELMITSGLVLMD-N--VRWVSFHSGYDFGYLLKLLTCtALPSSESDFFELLKLYFPYIYDIKFMIHGVDGLHGGLQKIGEDVGAQR-----------------------IGP-MHQAGSDALLTVDTFFK 277
                 58*************************************76.8999************************.*******9999*******.*************************************......9********999.7..9*************************************************999*****************.......................999.**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.63
# Mc/sec: 1281.86
//
Query:       MMETSP1325-20131115|5607_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 628.01
//
Query:       MMETSP1325-20131115|5609_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.0   0.0      0.086   11.9   0.0    1.0  1  PF09614.5 CRISPR-associated protein (Cas_Csy2)


Domain annotation for each model (and alignments):
>> PF09614.5  CRISPR-associated protein (Cas_Csy2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   6.3e-06     0.086      75     110 ..       6      41 ..       3      54 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.3e-06
   PF09614.5  75 ltrnpldkngktaaiieegrchlevsLvievsgkdk 110
                 +trn l+k      +  ++++hl++s +i v+g+d+
  MMETSP1325-20131115|5609_1   6 GTRNLLEKFDGEEDLWKDVSMHLKFSDLIDVHGNDD 41 
                 79******7777889******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.66
# Mc/sec: 203.33
//
Query:       MMETSP1325-20131115|5610_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-09   36.6   0.1      4e-09   36.5   0.1    1.1  1  PF00550.20 Phosphopantetheine attachment site


Domain annotation for each model (and alignments):
>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   0.1   2.9e-13     4e-09       6      65 ..      15      76 ..      10      78 .. 0.88

  Alignments for each domain:
  == domain 1    score: 36.5 bits;  conditional E-value: 2.9e-13
  PF00550.20  6 ivaevlgldpdei.dldtdlfelGlDSllaveliarleeefg.veipvedlfelptlaelaa 65
                ++ +++g+d+ ++  ld+ l ++GlDSl +++l+++l   fg  ++p+++l++ ptl+ ++a
  MMETSP1325-20131115|5610_1 15 ACVRIIGDDAGPVpPLDAQLLDYGLDSLGLADLVVQLDAIFGdDSVPIDELMADPTLKMIIA 76
                56778887777777899************************966**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 342.93
//
Query:       MMETSP1325-20131115|5611_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-15   55.5   0.0    4.5e-15   55.5   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0   3.3e-19   4.5e-15     273     310 ..      30      67 ..       8      69 .] 0.87

  Alignments for each domain:
  == domain 1    score: 55.5 bits;  conditional E-value: 3.3e-19
                 -TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT. CS
  PF00632.20 273 dedrLPtasTCfnyLkLpdYsskeilkekLltAieegq 310
                  +d LP+asTC+nyLkLp+Ys ke+++e+Ll+Ai+egq
  MMETSP1325-20131115|5611_1  30 IDDVLPSASTCTNYLKLPEYSGKEVMRERLLMAIHEGQ 67 
                 4567********************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 330.70
//
Query:       MMETSP1325-20131115|5614_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.3   1.4     0.0027   17.2   0.9    1.6  1  PF00642.19 Zinc finger C-x8-C-x5-C-x3-H type (and similar)


Domain annotation for each model (and alignments):
>> PF00642.19  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.9   1.9e-07    0.0027       3      27 .]     100     125 ..      98     125 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.9e-07
                 S---SGGGG--------.--SS---- CS
  PF00642.19   3 telCrffartGtCpyGd.rCkFaHge 27 
                 ++ C  ++rt +Cp+G+ rC++aH+e
  MMETSP1325-20131115|5614_1 100 QRVCVAHLRTNACPHGAaRCRYAHSE 125
                 57899***********549*****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.41s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 939.75
//
Query:       MMETSP1325-20131115|5615_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.071   12.6   0.1      0.094   12.2   0.0    1.3  1  PF09732.4 Cactus-binding C-terminus of cactin protein


Domain annotation for each model (and alignments):
>> PF09732.4  Cactus-binding C-terminus of cactin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.8e-06     0.094      45     101 ..      39      99 ..      19     124 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6.8e-06
   PF09732.4  45 FnifYpdLidkskapkykiek.....led.neetvllkfsagkpYediafkivnkeWdlskkk 101
                 F++ Yp+ ++ + +p+++  +     +e  ++++  l f   +pYe +afki n+  d+ + +
  MMETSP1325-20131115|5615_1  39 FEVDYPEAEE-GVQPRHRFMSayeqrVEApDKNYQYLLFA-CEPYETVAFKIPNHPIDKGEGR 99 
                 9999999866.67777777666777744446777777775.579********98876655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|5616_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|5618_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.047   11.6   0.0      0.053   11.4   0.0    1.0  1  PF01175.13 Urocanase


Domain annotation for each model (and alignments):
>> PF01175.13  Urocanase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.8e-06     0.053     412     461 ..      13      60 ..       8      71 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.8e-06
  PF01175.13 412 alafnelvkkGelkapvvigRDhlDsgsvasPnreteamkDGsdavaDwp 461
                 ala+ +++k G+++a v++  Dhl  g    P+  te   D  d   D++
  MMETSP1325-20131115|5618_1  13 ALAMATMIKLGQMRANVWL--DHLSLGLCGAPYSTTEPTVDSDDEYFDVA 60 
                 7999**************9..9*******************999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|5604_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.8e-20   71.6   0.0    5.3e-20   71.4   0.0    1.0  1  PF05277.7 Protein of unknown function (DUF726)


Domain annotation for each model (and alignments):
>> PF05277.7  Protein of unknown function (DUF726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.0   3.9e-24   5.3e-20     269     344 ..       2      74 ..       1      75 [. 0.96

  Alignments for each domain:
  == domain 1    score: 71.4 bits;  conditional E-value: 3.9e-24
   PF05277.7 269 kvrsVVsgRlvnvyskndwlLgflyRtasaqlrvaglgpidledvegveNvdvselvegHldYrkkvkkilkaigv 344
                 k+r VVsgR+vn ys++dw L++lyR++ + l+vag++p+d+   +gve +dvs+lv+gH +Y +k+++i++ +++
  MMETSP1325-20131115|5604_1   2 KARRVVSGRMVNCYSNRDWTLALLYRQQRWSLHVAGIRPVDT---PGVEDLDVSHLVSGHNKYIHKIPDIMDLVNL 74 
                 799*************************************77...89*************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 510.53
//
Query:       MMETSP1325-20131115|5619_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       624  (0.0456407); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 453.78
//
Query:       MMETSP1325-20131115|5620_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   13.1   0.0      0.039   12.7   0.0    1.2  1  PF00478.20 IMP dehydrogenase / GMP reductase domain


Domain annotation for each model (and alignments):
>> PF00478.20  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.8e-06     0.039       2      33 ..      46      75 ..      45      77 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.8e-06
                B--GGGEEEE---B-TTSGGGG-BEEEESSSS CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00478.20  2 gltfddvlllPkkstvlksrsevdlstkltkk 33
                g+tfdd+++lP+   +++  ++vdl+t++t++
  MMETSP1325-20131115|5620_1 46 GYTFDDLIVLPGS--IDFGVDDVDLTTRVTRN 75
                79***********..9**********999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 361.80
//
Query:       MMETSP1325-20131115|5623_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 415.97
//
Query:       MMETSP1325-20131115|5624_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 354.85
//
Query:       MMETSP1325-20131115|5613_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        75  (0.00548566); expected 273.4 (0.02)
Passed bias filter:                       71  (0.0051931); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.33s 00:00:00.60 Elapsed: 00:00:00.45
# Mc/sec: 165.08
//
Query:       MMETSP1325-20131115|5628_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00033   20.4   0.0     0.0021   17.9   0.0    2.2  1  PF00651.26 BTB/POZ domain
  ------ inclusion threshold ------
        0.1   12.7   0.0       0.15   12.2   0.0    1.3  1  PF12733.2  Cadherin-like beta sandwich domain


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   3.1e-07    0.0021      10     105 ..      45     145 ..      39     174 .] 0.75

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 3.1e-07
                 S--EEEEETT....TEEEEE-HHHHHH...H-HHHHHHTTTTTTTT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC.ECCHHHHHHHHH.HHHT-HHHHCHHHH CS
  PF00651.26  10 lcDvtlvvgd....gkefkahkavLaa...rSpyFkalftggeieestvseieledvepevfealLefiYtgeleitseenveelLaaa.dllqiprlkdacee 105
                 l+D  + v       k++ +hk  L     +  yF +lft+++   ++  ++++ d  +++f  +L+++Y++e + + +  + + L++   ++   +l d+  +
  MMETSP1325-20131115|5628_1  45 LSDFKITVTSksgsSKTYSVHKNQLGTgprANAYFVKLFTNSP-GSMH--QLTVLDSAADAFPVFLDYCYSSEGKLDATTHIGAALKHLaVFFGNSALFDEICQ 145
                 556666665555667888888888875332568*********4.5555..7899******************99997555555555433266665555555555 PP

>> PF12733.2  Cadherin-like beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.2e-05      0.15      58      84 ..      39      65 ..      21      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 2.2e-05
   PF12733.2 58 LevGknnt.itieVtaedgttkttYtlt 84
                L++Gk+ + ++i+Vt+++g++kt Y ++
  MMETSP1325-20131115|5628_1 39 LDPGKSLSdFKITVTSKSGSSKT-YSVH 65
                578999988**********8888.*997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 817.58
//
Query:       MMETSP1325-20131115|5625_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-22   77.3   0.0    1.2e-21   76.9   0.0    1.0  1  PF00891.13 O-methyltransferase
    1.5e-10   41.5   0.0    2.1e-10   41.0   0.0    1.2  1  PF12847.2  Methyltransferase domain
    8.6e-10   38.8   0.0    1.1e-09   38.4   0.0    1.2  1  PF08242.7  Methyltransferase domain
      2e-07   30.7   0.0    2.5e-07   30.3   0.0    1.1  1  PF13489.1  Methyltransferase domain
    2.6e-07   29.8   0.0    4.1e-07   29.2   0.0    1.2  1  PF01209.13 ubiE/COQ5 methyltransferase family
    2.5e-06   28.1   0.0    3.3e-06   27.7   0.0    1.2  1  PF13578.1  Methyltransferase domain
    4.5e-05   22.8   0.0     0.0001   21.6   0.0    1.5  1  PF05175.9  Methyltransferase small domain
      6e-05   22.5   0.0    7.1e-05   22.3   0.0    1.2  1  PF13847.1  Methyltransferase domain
    0.00073   19.8   0.0      0.001   19.3   0.0    1.2  1  PF08241.7  Methyltransferase domain
  ------ inclusion threshold ------
      0.011   15.9   0.0      0.019   15.1   0.0    1.4  1  PF13649.1  Methyltransferase domain
       0.02   14.1   0.0      0.026   13.7   0.0    1.1  1  PF05891.7  AdoMet dependent proline di-methyltransferase
      0.031   13.2   0.0       0.04   12.8   0.0    1.1  1  PF00398.15 Ribosomal RNA adenine dimethylase
      0.046   12.6   0.0      0.073   11.9   0.0    1.2  1  PF02390.12 Putative methyltransferase
      0.073   12.9   0.0       0.14   12.0   0.0    1.5  1  PF13659.1  Methyltransferase domain
      0.084   11.4   0.0       0.11   11.0   0.0    1.1  1  PF05958.6  tRNA (Uracil-5-)-methyltransferase


Domain annotation for each model (and alignments):
>> PF00891.13  O-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   0.0   1.3e-24   1.2e-21      96     229 ..      16     155 ..       8     159 .. 0.95

  Alignments for each domain:
  == domain 1    score: 76.9 bits;  conditional E-value: 1.3e-24
                 S-GTT-SEEEE--------HHHHHHHSTT-EEEEE-----HHHHHH.........TTTEEEE---TT.S--SS.BSEEEEES-GGGS-HHHHHHHHHHHCCTB---..--EEEEEE-B-GGG--CHHHH..HHHHHHHHHH---- CS
  PF00891.13  96 kdfeglsslvDVGGGtGalaaaivsayPhikgivfDlPhvvadake.........adrvefvgGDmf.esvPe.aDailLkwvLhdWsdedcvkiLkrcreAlppgkkGkvivveavlpeeeddseesetkllldlnmlvlneGk 229
                 +++ + ++l+D+GGG+G +  + ++++P+++++v+D P+v +  +e          drv+f+gG+   ++ P+  D++l++++    s +d++k+ k  +eAl+pg  G v+v+++++++++d ++      l  +++lv+++G 
  MMETSP1325-20131115|5625_1  16 DVLGEAKTLLDLGGGSGGFSMTLAQKFPNLNATVLDFPNVCKVGEEfaaksepyvGDRVKFMGGNALeTEYPKdQDMVLMSYISGSISGDDVKKMYKGAYEALRPG--GTVVVHDFMVEDTRDGPPLA---ALWACQHLVFTPGA 155
                 5678899***********************************9999999******9***********99***********************************99..*****************999...79999999999885 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   2.3e-13   2.1e-10       3     111 ..      22     128 ..      20     129 .. 0.85

  Alignments for each domain:
  == domain 1    score: 41.0 bits;  conditional E-value: 2.3e-13
   PF12847.2   3 krilDlGcGtGslslelarlrpgakvvgvDpseeslelarena..ksldleeriellqgdakeelsllerfDavllkgltldallal...deprrvlealpkllkpggrlvies 111
                 k++lDlG G+G +s  la+++p+ + + +D+ ++ +++ +e a  ++  +++r++++ g+a  e +   + D+vl++    +    +   d+++++ + ++++l+pgg++v++ 
  MMETSP1325-20131115|5625_1  22 KTLLDLGGGSGGFSMTLAQKFPNLNATVLDF-PNVCKVGEEFAakSEPYVGDRVKFMGGNA-LETEYPKDQDMVLMSY-ISG----SisgDDVKKMYKGAYEALRPGGTVVVHD 128
                 688****************************.6677776666654468999**********.99999999******99.333....2344799999***************985 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   1.2e-12   1.1e-09       1      98 [.      25     123 ..      25     124 .. 0.97

  Alignments for each domain:
  == domain 1    score: 38.4 bits;  conditional E-value: 1.2e-12
   PF08242.7   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl..kdirevldnirklLkpgGv 98 
                 L++G+G+G ++++l++k+p+++ t +D+ p++++  +e  ak e++  ++v++   ++l+++ ++  D+v++s     +  +d++++ + ++++L+pgG 
  MMETSP1325-20131115|5625_1  25 LDLGGGSGGFSMTLAQKFPNLNATVLDF-PNVCKVGEEFAAKSEPYVGDRVKFMGGNALETEYPKDQDMVLMSYISGSIsgDDVKKMYKGAYEALRPGGT 123
                 8**************************8.788889*************************9999***********************************7 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   2.8e-10   2.5e-07      13     158 ..      10     173 ..       5     177 .. 0.68

  Alignments for each domain:
  == domain 1    score: 30.3 bits;  conditional E-value: 2.8e-10
   PF13489.1  13 lerllar.lkpggrvLDiGcGtGillellaengfdvtgvDpspaaigkakqaqksqfdeed................aaepagkfdlivarevlehvp..dpeellrqiaellkpgGylllstpnas..lasdeafakwdylvprgthi.sffsaeslkelleeaGfe 158
                 l+r+ +  l + +++LD+G G+G ++  la++++++++  +++ ++    +++ + f + +                ++e  +  d +++++  +++   d++++ + ++e+l+pgG ++++++ ++   + + ++a w ++    t     +++  + + le aGfe
  MMETSP1325-20131115|5625_1  10 LARAMPDvLGEAKTLLDLGGGSGGFSMTLAQKFPNLNATVLDFPNV----CKVGEEFAAKSepyvgdrvkfmggnalETEYPKDQDMVLMSYISGSISgdDVKKMYKGAYEALRPGGTVVVHDFMVEdtRDGPPLAALWACQHLVFTPGaVSLTPGYVSQELEAAGFE 173
                 555554447899*****************99988655555544444....4455555333322222233333333335556669**************989***********************98633334444555655544332223445888888888888887 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   4.5e-10   4.1e-07      47     154 ..      20     129 ..      10     136 .. 0.84

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 4.5e-10
  PF01209.13  47 rgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekkl.keegki..nieflqanaeeLpfeddsfDvvtvsf..GlrnvtDklkaLkeayrvlkpGGrlvvlef 154
                 +++++lD+ gG+g ++++l+++   + + +vlD+ +n+ kvge+ + k e ++  +++f+ +na e ++ +d  D+v +s+  G     D +k  k ay  l+pGG++vv +f
  MMETSP1325-20131115|5625_1  20 EAKTLLDLGGGSGGFSMTLAQKFP-NLNATVLDF-PNVCKVGEEFAaKSEPYVgdRVKFMGGNALETEYPKD-QDMVLMSYisGSISGDDVKKMYKGAYEALRPGGTVVVHDF 129
                 45689***************9985.5678999*9.67899999966155555599*************9998.59999999555556679*******************9876 PP

>> PF13578.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   3.6e-09   3.3e-06       4     106 .]      28     129 ..      25     129 .. 0.81

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 3.6e-09
   PF13578.1   4 GvysGvstlvllqalkrngagrlysvdpdpgaeeaaalaee..agladrvrllkgdseea.lasladgsiDllfiDgghaaeavladleallprlapggvvlldDy 106
                 G  sG +++ l+q + + +a+ l     ++     +++a++   ++ drv+++ g+++e+ +++ + + + + +i g+ ++++v+++++ +++ l+pgg+v+++D+
  MMETSP1325-20131115|5625_1  28 GGGSGGFSMTLAQKFPNLNATVLDFPNVCK---VGEEFAAKsePYVGDRVKFMGGNALETeYPKDQ-DMVLMSYISGSISGDDVKKMYKGAYEALRPGGTVVVHDF 129
                 5569**************984444444455...33333333458*************996367777.8999**********************************5 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.1e-07    0.0001      21     137 ..       8     125 ..       5     135 .. 0.77

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.1e-07
                 HHHHHHS-TT..------B-------HHHHHHHH-TT----EEESBHHH.HHHHHHHHHH----..--EEE-STTTT--.--BS-EEE--------HHHHHHHHHHH---GGGB-----EE CS
   PF05175.9  21 elLletlpkk..lagkvlDlGcGaGvlgaalakespelevtlvDinarA.vesakanleanklen.vevlasdlleeveekkfdlivsNPPfhagkatelevaerliaeAkkhLkegGeLl 137
                 + L++++p+   +a+++lDlG G G  +++la++ p+l+ t++D      v    a  ++  + + v+++  ++le+  +k+ d++++         ++ + ++++ ++A ++L++gG+ +
  MMETSP1325-20131115|5625_1   8 RSLARAMPDVlgEAKTLLDLGGGSGGFSMTLAQKFPNLNATVLDFPNVCkVGEEFAAKSEPYVGDrVKFMGGNALETEYPKDQDMVLMSY---ISGSISGDDVKKMYKGAYEALRPGGTVV 125
                 5688889888767778*********************999999975433143333333334444579********99999******9973...3444567788999999999999999873 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   7.7e-08   7.1e-05       3     113 ..      20     131 ..      18     171 .. 0.86

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 7.7e-08
   PF13847.1   3 sgikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfe...nveFiqgdieeleklleesfDlvisnevl..naladpqkvlkeiervlkpggrlivespsl 113
                 +++++lDlG G+G ++  la +  p+ + + +D+ ++ +++ +e a+k +     +v+F  g++ e e  +++  D+v+           d +k++k + + l+pgg ++v+++ +
  MMETSP1325-20131115|5625_1  20 EAKTLLDLGGGSGGFSMTLA-QKFPNLNATVLDF-PNVCKVGEEFAAKSEPYvgdRVKFMGGNALETE--YPKDQDMVLMSYISgsISGDDVKKMYKGAYEALRPGGTVVVHDFMV 131
                 7899****************.7799********9.8999**99955555544488***********99..99999*****8777999999**********************9983 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.1e-06     0.001       1      95 []      25     126 ..      25     126 .. 0.86

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 1.1e-06
   PF08241.7   1 LdvGcGtglllealaer.paarvtgvDlseemlatakerlkeegle......lvvadaeelpfednsfDvvvssevlehl..edpekalkeiaRvLkpgGllvi 95 
                 Ld+G G+g ++  la++ p+ + t +D+ +  +++ +e ++++++       ++ ++a e+ ++ +  D+v++s     +  +d++k+ k ++  L+pgG +v+
  MMETSP1325-20131115|5625_1  25 LDLGGGSGGFSMTLAQKfPNLNATVLDFPNV-CKVGEEFAAKSEPYvgdrvkFMGGNALETEYP-KDQDMVLMSYISGSIsgDDVKKMYKGAYEALRPGGTVVV 126
                 8**************************9877.66555555555544667777***********8.666*******9999999******************9985 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   2.1e-05     0.019       2     101 .]      25     122 ..      24     122 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.1e-05
   PF13649.1   2 ldlGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskgl....kvkfvqadaralpfeegefdlvvcaglslehlspkqlealleeiarvlkpgG 101
                 ldlG GsG   + l++++   p+ + + +D+     + ++e ++++++    +vkf+ + a + + ++ + d+v++++     +s ++ +++++ + + l+pgG
  MMETSP1325-20131115|5625_1  25 LDLGGGSGGFSMTLAQKF---PNLNATVLDFPNV-CKVGEEFAAKSEPyvgdRVKFMGGNALETEYPK-DQDMVLMSYI-SGSISGDDVKKMYKGAYEALRPGG 122
                 9*****************...679******9654.588888888877788999******998877666.7788888766.455899999************998 PP

>> PF05891.7  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.8e-05     0.026      54     165 ..      19     132 ..       6     137 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.8e-05
   PF05891.7  54 revkvaldcGaGiGrvtknlLlkll....skvD...lvepvekflekakeelaeekkkvgkvyvvglqeftPeegrYdliWiqWcvghLtDedlvaflkrckkalkpnGlivvkenvak 165
                  e k+ ld G G G  + +l  k+     + +D   +  + e+f +k++ ++++   +v+ +   +l++  P++   d++ + ++ g ++ +d+ + +k + +al+p+G++vv + + +
  MMETSP1325-20131115|5625_1  19 GEAKTLLDLGGGSGGFSMTLAQKFPnlnaTVLDfpnVCKVGEEFAAKSEPYVGD---RVKFMGGNALETEYPKD--QDMVLMSYISGSISGDDVKKMYKGAYEALRPGGTVVVHDFMVE 132
                 567888999999999888887776545544455111445567899999988888...66666667788777766..58999********************************998765 PP

>> PF00398.15  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.3e-05      0.04      30     117 ..      20     110 ..       9     131 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.3e-05
  PF00398.15  30 ekdtvlEigpGkGalTeeLakrakqvvalEid.sklvkrlqkkla......kdenvevvhqDflkfstpedviheeflvvaniPynistplvkql 117
                 e +t+l++g G+G ++  La+ + ++ a  +d ++ +k+ + ++a       +++v+ + +++l+++ p+    + ++ ++ i ++is + vk++
  MMETSP1325-20131115|5625_1  20 EAKTLLDLGGGSGGFSMTLAQKFPNLNATVLDfPNVCKVGE-EFAaksepyVGDRVKFMGGNALETEYPK---DQDMVLMSYISGSISGDDVKKM 110
                 8899*******************666666666244555444.466677788899***************9...8999999999999998766665 PP

>> PF02390.12  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     8e-05     0.073      20      45 ..      21      46 ..       9      53 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8e-05
                B-EEEE--------HHHHHHH-TTSE CS
  PF02390.12 20 qklvleIGfGsGdflvalAkknPdkl 45
                +k++l++G GsG+f ++lA+k+P+ +
  MMETSP1325-20131115|5625_1 21 AKTLLDLGGGSGGFSMTLAQKFPNLN 46
                4589*******************987 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00016      0.14       3     113 ..      23     126 ..      21     128 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00016
   PF13659.1   3 rvldpgcGsGtfllaalell.aalllgvEldpraaalaarnlarag..laervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrdlydafleaaarllkpgGvlvl 113
                 ++ld+g GsG f  ++++   + ++++++  p+ +++ ++ +a+ +  + +rv +  g++++++  + ++  d v+++   g         +d+++   + a+++l+pgG +v+
  MMETSP1325-20131115|5625_1  23 TLLDLGGGSGGFSMTLAQKFpNLNATVLD-FPNVCKVGEEFAAKSEpyVGDRVKFMGGNALETE--Y-PKDQDMVLMSYISGS------ISGDDVKKMYKGAYEALRPGGTVVV 126
                 68*****************999*******.7888999998877753225689********9999..7.577899999655552......3457888888999999999999986 PP

>> PF05958.6  tRNA (Uracil-5-)-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00012      0.11     196     231 ..      20      55 ..       7      66 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00012
   PF05958.6 196 skgdllelycGnGnfslalaekfekvlateiakssv 231
                 + + ll+l  G G fs++la+kf  + at +  ++v
  MMETSP1325-20131115|5625_1  20 EAKTLLDLGGGSGGFSMTLAQKFPNLNATVLDFPNV 55 
                 4567*************************9988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 1010.64
//
Query:       MMETSP1325-20131115|5630_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.053   13.3   1.1      0.059   13.2   0.0    1.7  2  PF03931.10 Skp1 family, tetramerisation domain
       0.06   12.8   0.0       0.15   11.6   0.0    1.6  1  PF12123.3  N-acetylmuramoyl-l-alanine amidase
      0.079   13.1   0.1       0.27   11.4   0.0    1.9  2  PF12796.2  Ankyrin repeats (3 copies)
       0.13   10.8   7.9       0.18   10.3   5.5    1.1  1  PF10446.4  Protein of unknown function (DUF2457)
       0.19    9.6   1.7       0.23    9.3   1.2    1.1  1  PF02724.9  CDC45-like protein
       0.23    9.7   5.7        0.3    9.4   4.0    1.1  1  PF03344.10 Daxx Family
        1.5    9.3  13.2       0.36   11.3   6.5    1.9  2  PF11942.3  Spt5 transcription elongation factor, acidic N-terminal


Domain annotation for each model (and alignments):
>> PF03931.10  Skp1 family, tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.8       6.9   1.3e+04       7      12 ..      82      87 ..      73      93 .. 0.52
   2 ?   13.2   0.0     3e-05     0.059       3      32 ..     114     143 ..     112     149 .. 0.92

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 6.9
                E----E CS
  PF03931.10  7 SsDgee 12
                S+D++ 
  MMETSP1325-20131115|5630_1 82 SEDEDA 87
                555555 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 3e-05
                 EEEEE----EEEEEHHHHCTSHHHHHHTCT CS
  PF03931.10   3 ikLtSsDgeefeverevakqsktikamled 32 
                 + L+S+Dg + + +r+v+++ ++++aml++
  MMETSP1325-20131115|5630_1 114 VCLKSNDGLVVDLDRRVLEKMQFFSAMLSG 143
                 569*************************87 PP

>> PF12123.3  N-acetylmuramoyl-l-alanine amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.7e-05      0.15      14      36 ..     162     184 ..     158     186 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.7e-05
   PF12123.3  14 dGlayfvTeglsdaeLdkftaWL 36 
                  G + f  e+ls+++L++++aWL
  MMETSP1325-20131115|5630_1 162 GGPVCFAVEHLSGDALKRIKAWL 184
                 57788889**************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00014      0.27      48      81 ..       3      36 ..       1      76 [. 0.71
   2 ?   -1.6   0.0       1.5     3e+03      57      66 ..     312     321 ..     282     324 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00014
   PF12796.2 48 agadvnakdkegntpLhlAvrnghlelvklLlek 81
                 gad++  ++eg+t+ ++A r++h++l++ L+++
  MMETSP1325-20131115|5630_1  3 CGADIDLMTNEGETCAMIARRSKHHKLAEKLVQA 36
                4566666666666666666666666666666554 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.5
   PF12796.2  57 kegntpLhlA 66 
                   g+t+L lA
  MMETSP1325-20131115|5630_1 312 SAGRTALSLA 321
                 4677777776 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   5.5     9e-05      0.18      34      80 ..      56      99 ..      45     125 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 9e-05
   PF10446.4 34 kelairklgeeaeeealeeedededdeeddddeDeddddddddeDde 80
                    + kl+ ea+ ea+e++    +dee ++deD  d d++ +e de
  MMETSP1325-20131115|5630_1 56 AARMMAKLKAEAQAEAEEDD---GEDEESSEDEDAWDVDEEGEEGDE 99
                44455566655555554444...444444555666666665555544 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.2   0.00012      0.23     132     183 ..      56     112 ..      27     152 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00012
   PF02724.9 132 e.......eesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsne 183
                         + +++ + +edd e+eess++  +++++ ++e ++ de ++ +  +kr+++
  MMETSP1325-20131115|5630_1  56 AarmmaklKAEAQAEAEEDDGEDEESSED--EDAWDVDEEGEEGDEGRGAGGPKKRHRN 112
                 12223333333344444444444444443..3556655555555555555555555443 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   4.0   0.00015       0.3     425     504 ..      33     112 ..      11     136 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00015
  PF03344.10 425 ssestesPllasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedee 504
                  +++ ++P+ a+     +++  + +    + k e + + ee++ e+ee  e+e + +++e+ e+  eg+g +++++ + +
  MMETSP1325-20131115|5630_1  33 LVQAAQTPGGAATRVLRDQQRMSAARMMAKLKAEAQAEAEEDDGEDEESSEDEDAWDVDEEGEEGDEGRGAGGPKKRHRN 112
                 44555666555555555555555555556666777777777777888888999999999999999999999888877555 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       2.3   4.5e+03      75      75 ..      46      46 ..      10      67 .. 0.52
   2 ?   11.3   6.5   0.00019      0.36       5      40 ..      70     109 ..      68     134 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 2.3
   PF11942.3 75 s 75
                +
  MMETSP1325-20131115|5630_1 46 R 46
                2 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00019
   PF11942.3   5 EAevddeeeEeeeeedeeeelseeaefieea.......eddrr 40 
                 EAe+dd e+Ee +e++++ + +ee+e+ +e        +   r
  MMETSP1325-20131115|5630_1  70 EAEEDDGEDEESSEDEDAWDVDEEGEEGDEGrgaggpkK---R 109
                 9***********889899999999999998877764431...3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       603  (0.0441047); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.76u 0.39s 00:00:01.14 Elapsed: 00:00:00.50
# Mc/sec: 1754.13
//
Query:       MMETSP1325-20131115|5634_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0033   15.9   0.2     0.0033   15.9   0.1    1.1  1  PF06548.6  Kinesin-related
  ------ inclusion threshold ------
      0.051   13.8   1.5      0.073   13.3   1.0    1.2  1  PF06156.8  Protein of unknown function (DUF972)
      0.066   12.7   1.7       0.11   12.0   1.2    1.2  1  PF02996.12 Prefoldin subunit
       0.12   11.9   0.7       0.23   11.1   0.5    1.5  1  PF02183.13 Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> PF06548.6  Kinesin-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   9.7e-07    0.0033     212     252 ..      55      95 ..       7     109 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 9.7e-07
   PF06548.6 212 esfkkveldvdekEvLleEIqdLksqLklllssskstertr 252
                  s ++ +  ++   +LleE+++Lk+qL+++  ss+++++ +
  MMETSP1325-20131115|5634_1  55 MSIEEQTELINSNKALLEEVKSLKKQLQTVSASSQAVSKGK 95 
                 33444444488899**************8877777776644 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.0   2.1e-05     0.073      26      74 ..      56     103 ..      42     109 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.1e-05
   PF06156.8  26 elkkelkelleenaelkleneklrerleeleeeekkkekkkkkkklgeg 74 
                 +++ e +el++ n++l  e+++l+++l+++++++++ +k k +kk + g
  MMETSP1325-20131115|5634_1  56 SIE-EQTELINSNKALLEEVKSLKKQLQTVSASSQAVSKGKVTKKKKAG 103
                 444.45799********************99966555555555555554 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.2   3.1e-05      0.11       6      61 ..      48     102 ..      45     105 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--SS--B-EE-----EE----S-TTEE CS
  PF02996.12   6 eslqaeleqlkeaieelektletlktlkkedegkevlvplgaglyvkaevkdtdkv 61 
                 es+ +++ +++e+ e +++ ++ l+++k   ++++ +v  ++++  k++v++++k+
  MMETSP1325-20131115|5634_1  48 ESVVQSTMSIEEQTELINSNKALLEEVKS-LKKQLQTVSASSQAVSKGKVTKKKKA 102
                 56677777888888878888888888877.666888999***********999986 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.5   6.6e-05      0.23      20      43 ..      66      89 ..      61      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 6.6e-05
  PF02183.13 20 endsLqkEkekLraevlsLkeklq 43
                 n++L++E+++L++++++ ++ +q
  MMETSP1325-20131115|5634_1 66 SNKALLEEVKSLKKQLQTVSASSQ 89
                689999999999999998877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1221  (0.0893066); expected 273.4 (0.02)
Passed bias filter:                      817  (0.0597572); expected 273.4 (0.02)
Passed Vit filter:                        90  (0.0065828); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 576.15
//
Query:       MMETSP1325-20131115|5629_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-13   49.0   0.0    6.3e-13   48.4   0.0    1.4  1  PF08534.5  Redoxin
  ------ inclusion threshold ------
      0.025   14.1   0.0      0.053   13.0   0.0    1.5  1  PF00578.16 AhpC/TSA family


Domain annotation for each model (and alignments):
>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.0   9.2e-17   6.3e-13      45     137 ..      83     197 ..      38     208 .. 0.85

  Alignments for each domain:
  == domain 1    score: 48.4 bits;  conditional E-value: 9.2e-17
                 IIIIH.HHHTHHHH.HH----EEEEE-SS-HHHHHHHHH..................TT.TSEEE------HHHHHT..-EE-----....-EE--EEEEEE---EEEEEE-SSTT CS
   PF08534.5  45 saehp.yleklaklakekgvdvvavvaqndafvkeawak..................eglkipvlsDesasfakalglrltedasag....irtpryavidedgkvvylevepepg 137
                 s+++p ylek a+l kekgvd v+++ +nda v++aw+k                   +  +++l+D++a ++kal++++t    ++     r +r+a++ edg++++le+ ++++
  MMETSP1325-20131115|5629_1  83 STQVPgYLEKQAQL-KEKGVDEVIIYCVNDAAVMKAWSKdmgsedndkrtskgyvkrAESLVTYLADPNAFLTKALDMTITHEGPTAklgpNRCKRFAALYEDGVLKALEISASED 197
                 57888*********.*****************************************94558999*************9998765555899********************999873 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.8e-06     0.053      43     104 ..      84     163 ..      81     185 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7.8e-06
  PF00578.16  43 telpalaelyeefkkkgv.evigvsvdspeshkkfaekne.................lnfpllsDeegevakaygvlnee 104
                 t++p + e+  ++k+kgv evi+  v+++  +k+++++ +                   +++l+D++  ++ka+++  + 
  MMETSP1325-20131115|5629_1  84 TQVPGYLEKQAQLKEKGVdEVIIYCVNDAAVMKAWSKDMGsedndkrtskgyvkraeSLVTYLADPNAFLTKALDMTITH 163
                 68888889999*******77888888**************9999999999999999988999999999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.80
# Mc/sec: 650.01
//
Query:       MMETSP1325-20131115|5640_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-21   75.6   0.1    2.2e-21   75.2   0.1    1.1  1  PF05383.12 La domain
     0.0061   15.7   0.0     0.0077   15.4   0.0    1.2  1  PF01885.11 RNA 2'-phosphotransferase, Tpt1 / KptA family


Domain annotation for each model (and alignments):
>> PF05383.12  La domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.1   3.2e-25   2.2e-21       1      59 [.      18      73 ..      18      75 .. 0.94

  Alignments for each domain:
  == domain 1    score: 75.2 bits;  conditional E-value: 3.2e-25
                HHHHHHHHTSHHCHCC-CCCHHHHHHT----EEHHHHTTSHHHHCC-.S-HHHHHHHHC CS
  PF05383.12  1 ilkQvEyYFSdeNLpkDkFLrkqvdkdedgyVpisliasfkrikkltktdvklivealr 59
                +++Q++yYFS+eNL++D +L++++d+  dgyVp++ ia+f+r+k+lt t+++++v a++
  MMETSP1325-20131115|5640_1 18 VCRQIDYYFSEENLSHDTYLKSKMDR--DGYVPLTEIAQFNRVKALT-TQLSTLVTAVQ 73
                689***********************..9******************.78999998876 PP

>> PF01885.11  RNA 2'-phosphotransferase, Tpt1 / KptA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.1e-06    0.0077      26      82 ..      40      93 ..      30     116 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.1e-06
                -------B-HHHHH-------TT--HHHH---TTT-----EEE-.....---EEE-- CS
  PF01885.11 26 kldseGyvkladllaalklkslkvteeeilevVetndkkRFelkleekgeylIRAtq 82
                k+d++Gyv+l ++ + ++ k l+++++++ ++V+ ++     +  + +ge +IRA+ 
  MMETSP1325-20131115|5640_1 40 KMDRDGYVPLTEIAQFNRVKALTTQLSTLVTAVQLSQAL--DVL-DLDGECKIRARR 93
                89*******************************987542..333.234666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       546  (0.0399356); expected 273.4 (0.02)
Passed bias filter:                      467  (0.0341574); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 594.30
//
Query:       MMETSP1325-20131115|5641_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-12   44.5   0.0    8.4e-12   44.5   0.0    1.0  1  PF02181.18 Formin Homology 2 Domain


Domain annotation for each model (and alignments):
>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   6.1e-16   8.4e-12     114     198 ..       3      87 ..       1      88 [] 0.97

  Alignments for each domain:
  == domain 1    score: 44.5 bits;  conditional E-value: 6.1e-16
                 HHHHHHHHHCGGHHHHHHHHTTCCCGTTB-HHHHHHHCCCTCTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH-HHH CS
  PF02181.18 114 ellenLlkmlPtkeeleklkeykgdeskLseaeqFllelvkiprleeRleallfksefeeeveelkrkletleaaseeLresekl 198
                 + +++Ll  +Pt e+le ++ y+gd++ L+ +e F++ + ++p+++ Rlea + +  f++ + e    +e+l+aa  +L++++ +
  MMETSP1325-20131115|5641_1   3 DHVDSLLACAPTGEDLESVAPYDGDPELLATCEHFFYVVQDVPFFRRRLEAVQARQGFDRAIGEALGLIEALSAALAQLNTNNGF 87 
                 8899****************************************************************************99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|5643_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.37   10.6  12.3       0.47   10.2   8.6    1.0  1  PF05300.6  Protein of unknown function (DUF737)
        2.2    6.7   8.3        2.6    6.5   5.7    1.0  1  PF04388.7  Hamartin protein


Domain annotation for each model (and alignments):
>> PF05300.6  Protein of unknown function (DUF737)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   8.6   6.8e-05      0.47      20     128 ..      11     124 ..       8     126 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 6.8e-05
   PF05300.6  20 vnRMkepsapsskqqpsrasgass....vdeselrrkiaeelkkaleeakrkseeeaagllekekkedllkrleqeqaivqdelariakrEre.aaeeelkkavlrekasaeee 128
                 ++ Mke ++p+   + +++++a++     ++ +++   a+++ ++++++ +k+e++ + ++++ ++e+  ++++++++  +d  ++ ++  ++ aa+ + k ++  + a+ ++e
  MMETSP1325-20131115|5643_1  11 IKQMKEEETPTTTASATTTTTAATkkptPPKRTPNPLFAKTTATTTTTKATKKEPKVETVKKAVVEEAVEEAIAEAKVEAKDAAVKKVEAKKKvAAKATEKLSLSDKVAEWQKE 124
                 789***99999877766555555433334555666667777777778888888888899999999*****************87776665555055555566665555555555 PP

>> PF04388.7  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   5.7   0.00037       2.6     368     448 ..      17      98 ..       4     124 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00037
   PF04388.7 368 getgsgklelasestpstssp.pPaladd.ivraaaatirssaprkeelqselsfeklvrqeelqnveksaeeesldaaveeE 448
                  et      +++ +t++t++p pP ++ +     ++at  +++ +k+e + e+  + +v ++ +++   +a+ e+ daav++ 
  MMETSP1325-20131115|5643_1  17 EETPTTTASATTTTTAATKKPtPPKRTPNpLFAKTTATTTTTKATKKEPKVETVKKAVVEEA-VEEAIAEAKVEAKDAAVKKV 98 
                 33333333444445677888878888888777778888888888888877777666666554.55555566667777777653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2140  (0.156524); expected 273.4 (0.02)
Passed bias filter:                      826  (0.0604154); expected 273.4 (0.02)
Passed Vit filter:                       107  (0.00782621); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.41s 00:00:01.04 Elapsed: 00:00:00.52
# Mc/sec: 589.87
//
Query:       MMETSP1325-20131115|5645_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-13   49.6   1.0    1.1e-12   47.0   0.7    2.0  1  PF05899.7  Protein of unknown function (DUF861)
    5.5e-06   25.6   0.0      1e-05   24.8   0.0    1.5  1  PF07883.6  Cupin domain
    0.00025   20.4   0.0    0.00032   20.1   0.0    1.2  1  PF06249.7  Ethanolamine utilisation protein EutQ
  ------ inclusion threshold ------
      0.021   14.2   0.0      0.023   14.2   0.0    1.2  1  PF12852.2  Cupin
       0.13   11.6   0.0       0.21   10.9   0.0    1.3  1  PF00190.17 Cupin


Domain annotation for each model (and alignments):
>> PF05899.7  Protein of unknown function (DUF861)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.0   0.7   3.9e-16   1.1e-12      10      74 .]      47     111 ..      30     111 .. 0.76

  Alignments for each domain:
  == domain 1    score: 47.0 bits;  conditional E-value: 3.9e-16
                 EEEEE-SEEEEEE-SSEEEEEEEE-EEEEEE----EEEE-TT-EEEE----EEEEEEEEEEEEEE CS
   PF05899.7  10 giwectpGkfrleyeedEtcyileGevtvtpeggetvelgaGDlvvfpkglsgtwevaetvrKhY 74 
                 ++w ++  +   e +  E+ y+++G+ ++ p +ge+v +++GD+v+fp+g+ +tw+v e  + hY
  MMETSP1325-20131115|5645_1  47 PKWLVGNTNADKEMPYGELSYVISGKLEIIPPSGERVLVEEGDFVTFPQGFVATWTVLEELTWHY 111
                 33444444444455568899**************************************9988887 PP

>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   3.7e-09     1e-05      18      52 ..      62      96 ..      53     112 .. 0.90

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 3.7e-09
                T-EEEEEEEE--EEEE.E-TEEEEE-TT-EEEE-TT CS
   PF07883.6 18 gedeffyVleGegelt.vdgeeveleaGdsvyfpag 52
                +  e+ yV++G++e++   ge+v +e+Gd+v fp g
  MMETSP1325-20131115|5645_1 62 YG-ELSYVISGKLEIIpPSGERVLVEEGDFVTFPQG 96
                55.99*****************************98 PP

>> PF06249.7  Ethanolamine utilisation protein EutQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.2e-07   0.00032      86     146 ..      53     114 .]      43     114 .] 0.88

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.2e-07
   PF06249.7  86 ettfdwtlnydeidyvieGrldvli.dGrkvvaeaGdviliPkgskiefsvtdeakflyvay 146
                 +t  d  + y e+ yvi G+l+++   G +v  e Gd +  P+g    ++v +e  + y  y
  MMETSP1325-20131115|5645_1  53 NTNADKEMPYGELSYVISGKLEIIPpSGERVLVEEGDFVTFPQGFVATWTVLEELTWHYYLY 114
                 666777899*************99538*****************999999999988888765 PP

>> PF12852.2  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   8.2e-06     0.023      35      70 ..      59      96 ..      15     106 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 8.2e-06
   PF12852.2 35 a...aafhlvlrGscwlrvpgggepvrLsagdvvllprg 70
                +     +  v++G++ ++ p++ge v +++gd+v +p+g
  MMETSP1325-20131115|5645_1 59 EmpyGELSYVISGKLEII-PPSGERVLVEEGDFVTFPQG 96
                224578999*********.8889**************98 PP

>> PF00190.17  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   7.7e-05      0.21      57     104 ..      65     101 ..      62     109 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 7.7e-05
                 EEEEEE-EEEEEEEES.......EEEEEEEEE----EEEE-TT-EEEE CS
  PF00190.17  57 ilyvlqGrgrlgvvvpgcpeqsrrdehqkvrlreGdviviPagvahwl 104
                 + yv++G++    ++p  +         +v ++eGd + +P+g++  +
  MMETSP1325-20131115|5645_1  65 LSYVISGKLE---IIPPSG--------ERVLVEEGDFVTFPQGFVATW 101
                 6677777777...444322........33469************9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 593.88
//
Query:       MMETSP1325-20131115|5647_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|5648_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|5639_1  [L=708]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   28.1  12.7      0.027   13.9   0.0    7.0  8  PF00637.15 Region in Clathrin and VPS
  ------ inclusion threshold ------
      0.048   13.4   0.1      0.048   13.4   0.1    4.3  5  PF04212.13 MIT (microtubule interacting and transport) domain
      0.097   12.2   5.9       0.13   11.8   0.1    3.7  4  PF12931.2  Sec23-binding domain of Sec16


Domain annotation for each model (and alignments):
>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   5.9e-06     0.027      74     120 ..       2      48 ..       1      60 [. 0.94
   2 ?    0.6   0.0     0.077   3.5e+02      92     122 ..      75     105 ..      70     117 .. 0.77
   3 !    6.5   0.3    0.0011         5      79     124 ..     120     165 ..     114     175 .. 0.84
   4 ?    0.3   0.0     0.093   4.2e+02      85     108 ..     197     220 ..     179     239 .. 0.74
   5 ?   -0.9   0.0      0.22     1e+03     123     141 ..     257     275 ..     247     300 .. 0.62
   6 !    5.1   0.0    0.0031        14      63     116 ..     307     361 ..     291     384 .. 0.60
   7 ?   -0.9   0.0      0.22     1e+03      84     109 ..     382     407 ..     376     422 .. 0.61
   8 ?    1.6   0.0     0.037   1.7e+02      77     104 ..     557     584 ..     554     602 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 5.9e-06
                 THHHHHHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGGTTTT CS
  PF00637.15  74 ekvaklcekadlyeeavilykkinefkkaisllkklkdfddaieyak 120
                 +++a+ +e+++  +ea  +y   +e+  a+++++ ++ +d+ai++ak
  MMETSP1325-20131115|5639_1   2 QFLAQHLESEGNLREAEHHYCEAGEWLSAVNMYRSNDVWDEAIRVAK 48 
                 689*****************************************997 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.077
                 HH----THHHHSS-SSTT--TTGGGTTTTT- CS
  PF00637.15  92 lykkinefkkaisllkklkdfddaieyakka 122
                 l++k++ ++ ai+ + + ++fd+a+e a+ +
  MMETSP1325-20131115|5639_1  75 LLTKLGLIEPAIEYAMESGAFDHAFELARSS 105
                 6788888888888867778888888888765 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.0011
                 HHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGGTTTTT--- CS
  PF00637.15  79 lcekadlyeeavilykkinefkkaisllkklkdfddaieyakkasd 124
                 ++e++++y+ea   + + n+ ++ai+++ + +d+ +a+++a + + 
  MMETSP1325-20131115|5639_1 120 YLEDEEKYNEAEDEFINANKPREAIDMYVHQQDWANAMRVAETYDP 165
                 789999999999889999*********9999*******99887664 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.093
                 SHHHHHHHH----THHHHSS-SST CS
  PF00637.15  85 lyeeavilykkinefkkaisllkk 108
                 + e+a+  y+  +++++a+ l+++
  MMETSP1325-20131115|5639_1 197 KPELALAMYQEAQMWHEALALTQT 220
                 567888899999999999986554 PP

  == domain 5    score: -0.9 bits;  conditional E-value: 0.22
                 --TTHHHHHHHHHHHH-ST CS
  PF00637.15 123 sdpelwekllealldnkkf 141
                 ++++ w+ +++a+l+ +k+
  MMETSP1325-20131115|5639_1 257 ENSKQWSNAVDAYLNARKD 275
                 4445555555555544443 PP

  == domain 6    score: 5.1 bits;  conditional E-value: 0.0031
                 HTTSS---.S-TTHHHHHHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGG CS
  PF00637.15  63 eflkknnn.ydlekvaklcekadlyeeavilykkinefkkaisllkklkdfddai 116
                 e+ +++      e +a+++ +a+  e av++  + ++++ka +l++   +++d +
  MMETSP1325-20131115|5639_1 307 EVTRRLREvRRHEAAAEILREAQQLESAVECAMQGECWEKARELAQGQRALEDRV 361
                 4444444433345556666777777777777777777777666655555555555 PP

  == domain 7    score: -0.9 bits;  conditional E-value: 0.22
                 SSHHHHHHHH----THHHHSS-SSTT CS
  PF00637.15  84 dlyeeavilykkinefkkaisllkkl 109
                 +++++a+ ++ k +e++++ +++ k+
  MMETSP1325-20131115|5639_1 382 GHTDAALDVLAKGKEWDRLWEMTTKN 407
                 45555555666777777777764443 PP

  == domain 8    score: 1.6 bits;  conditional E-value: 0.037
                 HHHHHT-SSHHHHHHHH----THHHHSS CS
  PF00637.15  77 aklcekadlyeeavilykkinefkkais 104
                 + +c++++ +++a++l++++ + ++ai+
  MMETSP1325-20131115|5639_1 557 GMICKEQNQTNLAFVLLNRYVDLTEAIE 584
                 568*****************99999998 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   1.1e-05     0.048      12      52 ..       5      45 ..       4      48 .. 0.93
   2 ?   -0.2   0.1      0.18   8.2e+02       9      24 ..     115     130 ..     114     147 .. 0.85
   3 ?   -0.4   0.0      0.21   9.5e+02      19      32 ..     196     209 ..     186     215 .. 0.83
   4 ?   -3.6   0.0       2.1   9.5e+03      16      31 ..     257     272 ..     252     272 .. 0.77
   5 ?   -1.3   0.1      0.41   1.9e+03       9      25 ..     325     335 ..     317     350 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.1e-05
                HHHHHHTT-HHHHHHHHHHHHHHHHHHHHHCTTHHCHHHHH CS
  PF04212.13 12 AveaDeagkyeeAlelYkeAlelLlqalkyepnperrealr 52
                A   + +g++ eA ++Y+eA e L  +  y +n+ ++ea+r
  MMETSP1325-20131115|5639_1  5 AQHLESEGNLREAEHHYCEAGEWLSAVNMYRSNDVWDEAIR 45
                677899******************9999999********97 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.18
                 HHHHHHHHHTT-HHHH CS
  PF04212.13   9 ikkAveaDeagkyeeA 24 
                 +k A+  +++ ky+eA
  MMETSP1325-20131115|5639_1 115 LKHALYLEDEEKYNEA 130
                 5889999999999999 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.21
                 T-HHHHHHHHHHHH CS
  PF04212.13  19 gkyeeAlelYkeAl 32 
                  k e Al  Y+eA+
  MMETSP1325-20131115|5639_1 196 SKPELALAMYQEAQ 209
                 57789*******96 PP

  == domain 4    score: -3.6 bits;  conditional E-value: 2.1
                 HHTT-HHHHHHHHHHH CS
  PF04212.13  16 DeagkyeeAlelYkeA 31 
                 +++++ + A+++Y +A
  MMETSP1325-20131115|5639_1 257 ENSKQWSNAVDAYLNA 272
                 6777888888888765 PP

  == domain 5    score: -1.3 bits;  conditional E-value: 0.41
                 HHHHHHHHHTT-HHHHH CS
  PF04212.13   9 ikkAveaDeagkyeeAl 25 
                 +++A +      +e A+
  MMETSP1325-20131115|5639_1 325 LREAQQ------LESAV 335
                 444444......44444 PP

>> PF12931.2  Sec23-binding domain of Sec16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.48   2.2e+03     205     223 ..       5      24 ..       3      35 .. 0.86
   2 ?    0.4   0.1     0.084   3.8e+02     194     218 ..     107     131 ..      75     138 .. 0.65
   3 ?   11.8   0.1   2.9e-05      0.13      12      50 ..     141     179 ..     132     195 .. 0.83
   4 ?   -1.2   0.0      0.27   1.2e+03      23      65 ..     285     326 ..     282     360 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.48
   PF12931.2 205 AavLaeyGlkseaq.kYcda 223
                 A++L  +G+  ea+ +Yc+a
  MMETSP1325-20131115|5639_1   5 AQHLESEGNLREAEhHYCEA 24 
                 999******99997369997 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.084
   PF12931.2 194 iphLlayKlvhAavLaeyGlkseaq 218
                   +L  + l+hA++L ++ + +ea+
  MMETSP1325-20131115|5639_1 107 QRKLPEIHLKHALYLEDEEKYNEAE 131
                 3456667888888888888887775 PP

  == domain 3    score: 11.8 bits;  conditional E-value: 2.9e-05
   PF12931.2  12 ekAvelavdqrlWahAllisstlgkekwkqVvqefiree 50 
                  +A+++ v+q++Wa A+ +++t +++  ++V    +r  
  MMETSP1325-20131115|5639_1 141 REAIDMYVHQQDWANAMRVAETYDPSAVSDVYVAEARAA 179
                 689**************************9977666655 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 0.27
   PF12931.2  23 lWahAllisstlgkekwkqVvqefireevkvgknskkltelLa 65 
                  W  A  i++t  ++++ +Vv e  r+  +v+++ + ++e+L+
  MMETSP1325-20131115|5639_1 285 IWECAVRIARTELRSRYPEVVMEVTRRLREVRRH-EAAAEILR 326
                 5888999999999999999999999987777666.44556555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.07u 0.37s 00:00:01.44 Elapsed: 00:00:00.63
# Mc/sec: 2693.05
//
Query:       MMETSP1325-20131115|5636_1  [L=899]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-80  270.2   0.0    1.8e-80  269.8   0.0    1.2  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
    1.1e-25   90.6   0.0    5.3e-12   45.6   0.0    2.1  2  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
    3.4e-16   59.3   0.0    1.7e-15   57.1   0.0    2.3  2  PF06337.7  DUSP domain


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.8   0.0   3.9e-84   1.8e-80       2     272 .]     275     883 ..     274     883 .. 0.97

  Alignments for each domain:
  == domain 1    score: 269.8 bits;  conditional E-value: 3.9e-84
                 ----------THHHHHHHHHHHTSHHHHHHHHTTHCCH....H-TTHHTTTHHHHHHHHHHHHH.--HHH-SSS---HHHHHHHHHHBGGGGGCTTS-HHHHHHHHHHHHHHHHHHHCCHHHHSTTS-....................-SCHHHHC-EEEEEEEEETTCEEE.................................................................................................................................................................................................................................................................................................................................EEEECCB-SEEEEEEE-EEEETTTTEEEE-----B--SE.EE-GGGBSCHHH--BT..TSSCEEEEEEEEEE---TT---EEEEEESS-TT-EEEEETTEEEEE-HHHHTTCEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xx.............xxxxxxxxxxxxxxxxxxxxxxxxx.................................................................................................................................................................................................................................................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00443.24   2 gvtGleNlGntCYmnsvlQcLvsipelrdyllryeervaeineeneleeeaqlaraladlfkkl.venssekkavsPsefkktlkkineqfsgykQqDahEfllflLdqlhedlnrlnkkektekqkae...ds.............ndslitdlfkgqlksrlkclecknv.................................................................................................................................................................................................................................................................................................................................kvklkrlPeiLiihlkRfkyseerssnkKlnekvefple.Ldlssyvneekkeese..skpkkYeLvavvvHsGslssGHYvayvknneknkWlkfdDetvtevkeeevlkesaYvlfY 272
                 gv+Gl+NlGntC+mns+lQcL+++p+lr ++ +   ++aein++n+l++e++la+++ +l+k +  +  ++ ++v+P+ fk  ++++n++f+g++Q+D+ E+++flLd+lhedlnr+++k++ e+ +++   d+             nds i+dlf+gq+ks+l+c++c+nv                                                                                                                                                                                                                                                                                                                                 k++l+++P++L++hlkRf  s++r  ++Kl++ v+fpl  Ldls+yv + ++ee+   ++p +Y+ v+v +H+Gsl++GHY+a  +++e+++W+kf+D++ ++++ e v + +aY+lfY
  MMETSP1325-20131115|5636_1 275   883
                 799****************************8888.7779************************66677777889**************************************************999976522789999***********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************..888899**********************998877651156789******************************************************** PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0     8e-15   3.6e-11       1     167 [.     277     470 ..     277     527 .. 0.87
   2 !   45.6   0.0   1.2e-15   5.3e-12     160     293 ..     729     863 ..     689     866 .. 0.89

  Alignments for each domain:
  == domain 1    score: 42.9 bits;  conditional E-value: 8e-15
   PF13423.1   1 aGlennlnncYlnaLLqllfftldlfeailkhs.e........cskencllceLgflfnmLdsstkgtpcqa..snllralstipeaaalgeqqdvqeanrFileqlslelltlkvdifh................ererdkseaesslselfgtklisqnrciscqaekvkeesllnlelpyppsekgiklen 167
                 +Gl n +n+c++n+ Lq l  t++l+ +    + e          +e +l+   g l +m+  s+  t   +    +  +++t + ++a ++q d +e+  F+l+ l+ +l+    + +                   ++ k  ++s++++lf  ++ s+  c sc++ ++   + + ++lp+++ ++ ++++ 
  MMETSP1325-20131115|5636_1 277 VGLQNLGNTCFMNSTLQCLSNTPPLRAFFASGAyEaeinndnpLGHEGKLAESFGSLMKMMWPSGDETISSVapRGFKYQMGTSNPMFAGFQQHDSSELMNFLLDGLHEDLNRIRNKPYVestesdgrpddvvakeSMDNYKLRNDSQIHDLFRGQFKSTLVCPSCGNVSITFDPYTMVSLPLRTAQEEMQQSY 470
                 7*************************9998888745688887767999**************88776665552256888*********************************9976665577999999999999766677788999***************************************666555544 PP

  == domain 2    score: 45.6 bits;  conditional E-value: 1.2e-15
   PF13423.1 160 ekgiklenileeslnseknke...ikcesckkkssaevakkftslPpiLgIclkrynekefgakrlntkvdiple.lrlphfiqddeqenekplsgefkyeLqavVchigdsltsghlvSlirvaeseksqWylFnDf 293
                 e ++ l+++l+ ++ +ek      + c++c+++  a+ + ++ s P++L+++lkr ++ +    +l+t v +pl+ l+l+  + +  qe++++ ++  +y  ++v  h+g+ l  gh+ ++ r +  e+ qWy+FnD+
  MMETSP1325-20131115|5636_1 729 EGKLHLKQCLDLFSTEEKLSPedaWYCSKCQQHVEATKKMELWSTPKVLVLHLKRFSYSRYYRDKLETPVNFPLDdLDLSPYVLQPPQEEDGQPAQPPIYDCVGVSNHMGS-LGGGHYTACGRSS--EDGQWYKFNDS 863
                 34788999*****9999998888899*********************************999************99***********9999999999*************9.************6..888*******5 PP

>> PF06337.7  DUSP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.0   3.7e-19   1.7e-15       3      98 ..      61     143 ..      59     144 .. 0.92
   2 ?   -3.1   0.0       2.1   9.4e+03      34      61 ..     409     432 ..     384     438 .. 0.56

  Alignments for each domain:
  == domain 1    score: 57.1 bits;  conditional E-value: 3.7e-19
   PF06337.7   3 kwyliskkWleqwkdyvkydekeedsekssaqkpGpIdnssLveteeekakstllengrlkpqlqegkdyelvpeevweaLyewYgggpeiprkvi 98 
                  +yl+   W+ +w dyv y+++ e++ +    +p++Idn+sL+   +           +l+  + e++d+  +  e we+L++wYgggp++pr+ i
  MMETSP1325-20131115|5636_1  61 MYYLVDAAWWLSWTDYVGYNDNGESKGP----RPNEIDNTSLLAAGSA---------AKLRMAINEDNDFKFLLPEEWELLHSWYGGGPALPRRGI 143
                 69********************998775....6***********9985.........489999******************************865 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 2.1
   PF06337.7  34 qkpGpIdnssLveteeekakstllengr 61 
                 +  +++dn++L ++ +    +++l +g+
  MMETSP1325-20131115|5636_1 409 VAKESMDNYKLRNDSQ----IHDLFRGQ 432
                 3334778888877664....33445555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (899 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.29u 0.35s 00:00:01.64 Elapsed: 00:00:00.72
# Mc/sec: 2992.12
//
Query:       MMETSP1325-20131115|5649_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-26   90.5  10.4    8.5e-26   90.4   7.2    1.0  1  PF00083.19 Sugar (and other) transporter
    4.1e-05   22.3   4.8    5.3e-05   22.0   3.4    1.2  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.043   13.6   0.0      0.061   13.2   0.0    1.2  1  PF02838.10 Glycosyl hydrolase family 20, domain 2
        4.1    7.4   8.6       0.55   10.3   0.7    2.2  2  PF12666.2  PrgI family protein


Domain annotation for each model (and alignments):
>> PF00083.19  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   7.2   2.5e-29   8.5e-26     318     449 ..       1     128 [.       1     130 [. 0.95

  Alignments for each domain:
  == domain 1    score: 90.4 bits;  conditional E-value: 2.5e-29
  PF00083.19 318 llllGlagmaicavflgivvlllvakskaasivaivfillfiaffalgwgpvpwvlvsElfpqsvRpkalaiavaanwlanfligllfpiiteaigggyvflvfagllvlfilfvfffvpetkgrtleeiee 449
                 l++++ +gm+++++ l+  +++ ++k+   s +a++ ++ +i ff+lg+gpvp++++sEl+p+++R ++ +ia  +nw++ f++  +fp+++ ai++ + +l fa++++l++ f ++ +petkg++le+i++
  MMETSP1325-20131115|5649_1   1 LMIISTSGMTLFCLTLS--FFFFNDKE--PSALALISLIGYIIFFSLGYGPVPYLVMSELYPLEIRETCCSIAMLTNWVGAFAVTETFPSLVIAITAQGAYLAFAVVCALSCAFAVLVLPETKGKSLEQIQN 128
                 6899************9..77777765..6999*************************************************************************************************97 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   3.4   1.5e-08   5.3e-05      66     187 ..       3     129 ..       1     140 [. 0.74

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 1.5e-08
  PF07690.11  66 llglllfalglllll..f.a...sslwal...llvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGa.ilgpllggllasslgWravFlilailsllaavlvllllprepperkrkspae 187
                 +++  ++ l++l l+  f     +s   +   l+   ++ +lg   + p+ + ++++++p e r    +++++++ +Ga +++  + +l++ ++  ++++l++a++++l++ +++l+lp+++ ++  + + e
  MMETSP1325-20131115|5649_1   3 IISTSGMTLFCLTLSffFfNdkePSAL-AlisLIGYIIFFSLG---YGPVPYLVMSELYPLEIRETCCSIAMLTNWVGAfAVTETFPSLVI-AITAQGAYLAFAVVCALSCAFAVLVLPETKGKSLEQIQNE 129
                 555555555533333222325543322.312366666666666...69*******************************777788888888.889***************9998888888887777666555 PP

>> PF02838.10  Glycosyl hydrolase family 20, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.8e-05     0.061      77     116 ..      50      90 ..      41     103 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.8e-05
                 -TT----EEEEE-SSEEEEEESS--.------HHHHHH-EE CS
  PF02838.10  77 sLgsdEsYtLsiksdsivikantvw.GalrGletlsqLivq 116
                  L ++E Y L+i ++ ++i   t w Ga+   et+  L++ 
  MMETSP1325-20131115|5649_1  50 YLVMSELYPLEIRETCCSIAMLTNWvGAFAVTETFPSLVIA 90 
                 5889****************999988************985 PP

>> PF12666.2  PrgI family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.9     0.073   2.5e+02      29      62 ..      11      43 ..       1      58 [. 0.49
   2 ?   10.3   0.7   0.00016      0.55      17      75 ..      59     126 ..      54     131 .. 0.72

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.073
   PF12666.2 29 vlvgvgvflllrlylg...tsialilmilvvlpfall 62
                ++++ + f+++    +   +s+ +++ ++  + f+ l
  MMETSP1325-20131115|5649_1 11 LFCLTLSFFFF----NdkePSALALISLIGYIIFFSL 43
                22222222222....1223444444455555555544 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00016
   PF12666.2  17 ltlRQliclilavlvgvgvflllrlylg.....tsialilmilvvlp....fallafykkkglkfeky 75 
                 l +R  +c+i+++   vg+f+++  + +     t + ++l+++vv      fa+l + + kg ++e++
  MMETSP1325-20131115|5649_1  59 LEIRETCCSIAMLTNWVGAFAVTETFPSlviaiTAQGAYLAFAVVCAlscaFAVLVLPETKGKSLEQI 126
                 678999****************9999866666644444444444433334488888888888777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       530  (0.0387654); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|5652_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 953.44
//
Query:       MMETSP1325-20131115|5651_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-17   61.7   0.2    6.3e-17   60.8   0.1    1.5  1  PF09454.5 Vps23 core domain
    3.9e-13   49.0   0.0      6e-13   48.4   0.0    1.3  1  PF05743.8 UEV domain
  ------ inclusion threshold ------
      0.074   12.9   1.4       0.17   11.8   0.9    1.7  1  PF13659.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF09454.5  Vps23 core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.1   1.4e-20   6.3e-17       1      64 [.     219     282 ..     219     283 .. 0.95

  Alignments for each domain:
  == domain 1    score: 60.8 bits;  conditional E-value: 1.4e-20
                 GGTEE-S----HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHH---HHHHHHHHHHHHHH CS
   PF09454.5   1 devieaedplsnQllelvAedeAieDtiyvLeralkrgkidleeylkkvReLareqFlkRalik 64 
                 d+++++ d  s+++lelvAe  AieD++++L+r l++g ++l+ +l++vR+L+r+qFl  a+ k
  MMETSP1325-20131115|5651_1 219 DDLVQPRDACSQKMLELVAEAGAIEDALFALDRGLNNGMVELDLFLREVRKLSRQQFLILAHEK 282
                 789999***************************************************9888765 PP

>> PF05743.8  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.0   1.3e-16     6e-13      64     121 .]       2      60 ..       1      60 [. 0.97

  Alignments for each domain:
  == domain 1    score: 48.4 bits;  conditional E-value: 1.3e-16
                 --EEEE-GCC--TSGGGG.GB-----B--HHHHS--TTT--HHHHHHHHHH-------X CS
   PF05743.8  64 aPivyvkptksmvikkne.nvdaqGrvylpyLeeWkreksnlvslvqelaqafeeepPv 121
                 aPi+yv+pt++m++k+++ +v+a+G+v  pyL+eW+ ++s+l+ l  ++ ++f ++pPv
  MMETSP1325-20131115|5651_1   2 APICYVRPTSDMMVKPGHhSVNAEGLVDSPYLREWQAQQSSLIPLCASMRSVFGRDPPV 60 
                 7***************9989**************************************7 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.9   3.7e-05      0.17      50      88 ..      68     105 ..      33     188 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.7e-05
   PF13659.1  50 ervrvrqgdlrdlaellragsfdlvvtnpPygpragara 88 
                 ++ + +q+ l+++a +++++s+++ vt pPyg++a ++ 
  MMETSP1325-20131115|5651_1  68 DQQQAHQAALAQAA-QATPPSYTATVTPPPYGNTATTPP 105
                 55567777888877.799*************99854443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       526  (0.0384728); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 1473.50
//
Query:       MMETSP1325-20131115|5654_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.087   12.6   0.1      0.093   12.5   0.0    1.1  1  PF11209.3 Protein of unknown function (DUF2993)


Domain annotation for each model (and alignments):
>> PF11209.3  Protein of unknown function (DUF2993)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.8e-06     0.093      34      82 ..       2      47 ..       1      71 [. 0.80

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.8e-06
   PF11209.3 34 gfPfltqllgGevdrvtvaargvvydgpglriesveleltdvrlnlgdi 82
                g P  tq+ gG +++  va++g++ +gp++   + ++ +++ +l+  + 
  MMETSP1325-20131115|5654_1  2 GKP-STQVFGGTFSAPAVASPGTPRPGPNVA--DSSILVQGGSLRTWSY 47
                779.78*******************888877..8888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|5657_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        88  (0.00643651); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 263.13
//
Query:       MMETSP1325-20131115|5655_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.43s 00:00:00.80 Elapsed: 00:00:00.67
# Mc/sec: 253.94
//
Query:       MMETSP1325-20131115|5658_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-13   48.6   5.1    1.1e-12   48.2   3.5    1.2  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
       0.44    8.8   3.2       0.53    8.6   2.2    1.1  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   3.5   1.6e-16   1.1e-12     167     214 ..       2      49 ..       1      55 [. 0.88

  Alignments for each domain:
  == domain 1    score: 48.2 bits;  conditional E-value: 1.6e-16
                 -EEEEE---BSCT.TC-EEEEE-SB-TT------EEEESSSSSGGGTTS CS
  PF00112.18 167 nhavlivGygven.gkkyWivkNSWgtdwGekGYiriargknnecgies 214
                 +h v++vG+gv++ g+kyW ++NSWg+ wGe G+ ri+rg++ + ++es
  MMETSP1325-20131115|5658_1   2 DHEVAVVGWGVDEnGVKYWEMRNSWGEYWGEMGWARIERGRD-TLKLES 49 
                 8*********98769*************************98.655555 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.2   7.8e-05      0.53     360     394 ..       2      35 ..       1      40 [. 0.86

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 7.8e-05
  PF03051.10 360 tHamvltgvdvdddgkvtkwkvEnsWGedsGekGy 394
                 +H + ++g  vd+ + v+ w + nsWGe  Ge G+
  MMETSP1325-20131115|5658_1   2 DHEVAVVGWGVDE-NGVKYWEMRNSWGEYWGEMGW 35 
                 6999999999955.55789************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 691.26
//
Query:       MMETSP1325-20131115|5659_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00059   20.1   0.2    0.00077   19.7   0.1    1.2  1  PF07172.6  Glycine rich protein family
     0.0023   17.3   0.9      0.003   16.9   0.6    1.1  1  PF07219.8  HemY protein N-terminus
  ------ inclusion threshold ------
      0.012   14.8   0.4      0.013   14.7   0.3    1.1  1  PF06143.6  Baculovirus 11 kDa family
      0.028   14.2   0.4      0.031   14.0   0.3    1.1  1  PF06679.7  Protein of unknown function (DUF1180)
      0.034   14.4   0.0      0.042   14.1   0.0    1.2  1  PF10961.3  Protein of unknown function (DUF2763)
      0.043   13.9   1.8      0.051   13.6   1.3    1.1  1  PF11162.3  Protein of unknown function (DUF2946)
       0.12   11.5   0.6       0.14   11.3   0.4    1.0  1  PF06525.6  Sulfocyanin (SoxE)
       0.88    8.7   3.3       0.87    8.7   2.3    1.0  1  PF08006.6  Protein of unknown function (DUF1700)
        1.2    9.3   3.9        1.7    8.7   2.7    1.3  1  PF00895.15 ATP synthase protein 8
        7.2    4.7   7.9        7.6    4.6   5.5    1.0  1  PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
          9    4.9  13.1         11    4.6   9.1    1.1  1  PF12679.2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> PF07172.6  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   6.2e-07   0.00077       6      69 ..      12      73 ..       3      76 .. 0.56

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 6.2e-07
   PF07172.6  6 lilLglllaavlLissevaaaelskeeksekeeevkdekyggggkhggGgygggggggngGGGy 69
                lil+ l+l+++ L +s+  ++++ +++ + +++    +   g g + g g g   g g gGGG 
  MMETSP1325-20131115|5659_1 12 LILFVLVLVFLTLLTSAALTTAA-ATT-TSSSAAAAAAASAGAGAGAGAGAGARAGAGDGGGGF 73
                45666666666666666555554.333.333333444444566666666666666666677775 PP

>> PF07219.8  HemY protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.6   2.4e-06     0.003      19      79 ..       4      63 ..       2      69 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 2.4e-06
   PF07219.8 19 avillllllavlvllewllrliirlpsrvrryfrrrkrrrgrkalseGllalaeGdwakAe 79
                ++++l+l+l+++vl+ ++l+l++++  ++++   +   + + +a s G   +++G +a A+
  MMETSP1325-20131115|5659_1  4 SLFFLILVLILFVLVLVFLTLLTSAALTTAAATTTSSSAAAAAAASAGAG-AGAGAGAGAR 63
                57899999999999***********9999988888888888888887764.4555555554 PP

>> PF06143.6  Baculovirus 11 kDa family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.3     1e-05     0.013      34      71 ..       4      40 ..       1      51 [. 0.74

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1e-05
   PF06143.6 34 rdFvLvicglvvfvvivlfilLlvvilknaeaeeaeke 71
                  F L++  l++fv++++f++Ll + + ++ a++++ +
  MMETSP1325-20131115|5659_1  4 SLFFLIL-VLILFVLVLVFLTLLTSAALTTAAATTTSS 40
                5566665.6899***********998887777666655 PP

>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.3   2.5e-05     0.031      13      74 ..      15      75 ..       4      78 .] 0.60

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.5e-05
   PF06679.7 13 sallLlllalLaaeaallseaesaassePeprtlsalpPgptpanptalleadakkGkaset 74
                 +l+L++l+ L ++aal + a++++ss+  +   +++  g++++  +++  +++ +G++ ++
  MMETSP1325-20131115|5659_1 15 FVLVLVFLT-LLTSAALTTAAATTTSSSAAAAAAASAGAGAGAGAGAGARAGAGDGGGGFDS 75
                345555555.5566777777777777666666666666677766555555556655555554 PP

>> PF10961.3  Protein of unknown function (DUF2763)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   3.4e-05     0.042      28      82 ..      13      72 ..       2      77 .. 0.51

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.4e-05
   PF10961.3 28 ilefislFFrtllspev.ekarrknsss....kkkiddgrGgpgapgGgrrlgriggggg 82
                il +++l F tll   + ++a  +  ss        ++g G + ++g g r g + gggg
  MMETSP1325-20131115|5659_1 13 ILFVLVLVFLTLLTSAAlTTAAATTTSSsaaaAAAASAGAGAGAGAGAGARAGAGDGGGG 72
                444556677777754431333332222200003445566666666666666666666666 PP

>> PF11162.3  Protein of unknown function (DUF2946)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.3   4.1e-05     0.051       4      52 ..      12      59 ..       5      74 .. 0.48

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 4.1e-05
   PF11162.3  4 lallaillavlaPlisqalaaassasallsaeiCsadgsghtamdksas 52
                l l++++l +l  l s al+ +++a +++s++  +a++s+++   ++a 
  MMETSP1325-20131115|5659_1 12 LILFVLVLVFLTLLTSAALT-TAAATTTSSSAAAAAAASAGAGAGAGAG 59
                55677777777777777777.3333333222222222222222222222 PP

>> PF06525.6  Sulfocyanin (SoxE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   0.00011      0.14       4      43 ..       9      47 ..       6      60 .. 0.48

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00011
   PF06525.6  4 ivviivvvgvavyvatsitktssttstlssstsssttsss 43
                i+v+i+ v v v++++ ++++  tt   ++++ss++++++
  MMETSP1325-20131115|5659_1  9 ILVLILFVLVLVFLTLLTSAAL-TTAAATTTSSSAAAAAA 47
                6777777777777443333333.33333333333222222 PP

>> PF08006.6  Protein of unknown function (DUF1700)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.3    0.0007      0.87      99     130 ..       5      36 ..       1      58 [. 0.47

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0007
   PF08006.6  99 pliilillvlslliiglvlllspliLlvkgil 130
                  ++++++l+l +l+++++ ll++ +L  ++ +
  MMETSP1325-20131115|5659_1   5 LFFLILVLILFVLVLVFLTLLTSAALTTAAAT 36 
                 23333333333333333334444444333333 PP

>> PF00895.15  ATP synthase protein 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.7    0.0014       1.7      10      41 ..       7      38 ..       2      46 .. 0.51

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0014
  PF00895.15 10 fliflflwlsllvvlqlkilkhnprnspakkt 41
                fli+++++++l +v+  ++++   ++  a++t
  MMETSP1325-20131115|5659_1  7 FLILVLILFVLVLVFLTLLTSAALTTAAATTT 38
                45555555555555555555544333333333 PP

>> PF07462.6  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   5.5    0.0061       7.6     264     305 ..      26      67 ..      19      76 .. 0.51

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0061
   PF07462.6 264 aeakvtavvtppsadaaaapdsvrpagasgaasgstsaptae 305
                 ++a+ t++++ +++ +aaa+ ++++ +++ga++g +  + a+
  MMETSP1325-20131115|5659_1  26 TSAALTTAAATTTSSSAAAAAAASAGAGAGAGAGAGARAGAG 67 
                 344444444433333333344444445555666655555554 PP

>> PF12679.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   9.1    0.0089        11     154     192 ..      10      48 ..       3      54 .. 0.69

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0089
   PF12679.2 154 lllllllsvllllavlvflalgllvSsvlkssstaaaaa 192
                 l+l+l+  vl++l++l+ +al+ + ++ + ss++aaaaa
  MMETSP1325-20131115|5659_1  10 LVLILFVLVLVFLTLLTSAALTTAAATTTSSSAAAAAAA 48 
                 334444444444455599********9999999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1552  (0.113517); expected 273.4 (0.02)
Passed bias filter:                      933  (0.0682417); expected 273.4 (0.02)
Passed Vit filter:                       180  (0.0131656); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.47u 0.45s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|5661_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|5660_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 772.62
//
Query:       MMETSP1325-20131115|5663_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-22   80.1   0.0    1.5e-22   79.5   0.0    1.2  1  PF01764.20 Lipase (class 3)
    3.3e-06   27.0   0.8    3.8e-06   26.8   0.5    1.2  1  PF12697.2  Alpha/beta hydrolase family
    0.00099   18.7   0.1     0.0012   18.5   0.1    1.4  1  PF12695.2  Alpha/beta hydrolase family
     0.0015   18.0   0.2     0.0023   17.4   0.1    1.2  1  PF07819.8  PGAP1-like protein
     0.0068   15.5   0.0     0.0095   15.1   0.0    1.2  1  PF05057.9  Putative serine esterase (DUF676)
      0.007   15.6   0.0      0.011   15.1   0.0    1.2  1  PF08237.6  PE-PPE domain
  ------ inclusion threshold ------
       0.09   12.0   0.1       0.61    9.3   0.0    1.9  2  PF11187.3  Protein of unknown function (DUF2974)
       0.18   11.8   1.0       0.31   11.1   0.1    1.7  2  PF00975.15 Thioesterase domain


Domain annotation for each model (and alignments):
>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   0.0   8.5e-26   1.5e-22       1     137 [.      37     177 ..      37     181 .. 0.89

  Alignments for each domain:
  == domain 1    score: 79.5 bits;  conditional E-value: 8.5e-26
                 EEEEE-E-SHHHHHHHHHHTECCCTTCGGS.........TT-EEE---HHHHHHHHHHHHHHHHHHHHHSTTSEEEEE-------HHHHHHHHHHHT-...TTTEEEEEES-S----HHHHHHHHH------EEEEEETTBSGGG- CS
  PF01764.20   1 vvafRGtetaeewltdldislvevdellek.........eggkvhkgfleayksareqvlkelkrllekypdykivvtGHSLGGalAlLaaadlaenglnksslvtvytfGqPrvgnkefaelveeklkkskvlrvvnenDivprl 137
                 v +fRGt++a ++ltd+++  + +++             ++ kvh gfl a+ s++++v + +    +     ++ +tGHS+GGa+A La+a+l+ + ++   +  ++t+G+P +gn  f++ +e++   +  lr++ ++D+vpr+
  MMETSP1325-20131115|5663_1  37 VCSFRGTKDAVDVLTDIKFLSKTFEPRAPLhphtsnphaDDAKVHGGFLAAWLSIADEVCRVVDGARS----RHVLMTGHSMGGAVAQLASAYLLGSLPE-TTSTHLVTVGAPAIGNVGFKRILESAAVPRGGLRFTGHGDVVPRV 177
                 579****************999999876558899*******************766666666655555....558*********************8766.799*********************988888**************8 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.5   2.2e-09   3.8e-06      48     107 ..      87     162 ..      36     257 .. 0.66

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 2.2e-09
                 -HHHHHHHHHHHHHH--.--EEEE--------HHHHHH-....---..EEEEEEE------STT...........- CS
   PF12697.2  48 tledlaadlaalldalglrpvvlvGHSlGgavalaaaar....rpd.lvrglvlidppgplpas...........a 107
                  +   a+++++++d ++ r v   GHS+Ggava++a a+     p+    +lv +++p+    +           +
  MMETSP1325-20131115|5663_1  87 AWLSIADEVCRVVDGARSRHVLMTGHSMGGAVAQLASAYllgsLPEtTSTHLVTVGAPAIGNVGfkrilesaavpR 162
                 3566799***************************999874333344666778888877744433444444443330 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   6.8e-07    0.0012      44      88 ..      93     183 ..       8     259 .. 0.71

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 6.8e-07
   PF12695.2  44 aaakrvlaadlldleriilvGhSlGGgvalelag...............................................rd.drvkglvll 88 
                 +++ rv+ +++ + +++ + GhS+GG+va ++ +                                               +  +rv g+ ++
  MMETSP1325-20131115|5663_1  93 DEVCRVV-DGA-RSRHVLMTGHSMGGAVAQLASAyllgslpettsthlvtvgapaignvgfkrilesaavprgglrftghgDVvPRVGGVLAY 183
                 2555555.544.779***************988788888888887777777777777777777777777777777777665223555555554 PP

>> PF07819.8  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.1   1.4e-06    0.0023      84     124 ..     104     146 ..      91     155 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.4e-06
   PF07819.8  84 ptsviliGHSmGGlVArsa..ltlpnyikdsvntivtlasPha 124
                  + v + GHSmGG VA++a    l +  + + + +vt+++P  
  MMETSP1325-20131115|5663_1 104 SRHVLMTGHSMGGAVAQLAsaYLLGSLPETTSTHLVTVGAPAI 146
                 67899***********976114456666666777888888865 PP

>> PF05057.9  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.6e-06    0.0095      50     131 ..      78     151 ..      52     160 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 5.6e-06
   PF05057.9  50 sktfkgidvlgerlaeevlevvkkkkdknkkiSfvghSlGgliaraaiaklkesemkeeaikglepvtfitlasPhLGvlys 131
                 +k ++g+      +a+ev+ vv+ ++++  ++ + ghS+Gg +a+ a a+l  s        +     ++t+  P +G ++ 
  MMETSP1325-20131115|5663_1  78 AKVHGGFLAAWLSIADEVCRVVDGARSR--HVLMTGHSMGGAVAQLASAYLLGSL------PETTSTHLVTVGAPAIGNVGF 151
                 56677777778889*************9..9******************999654......445777888888888887765 PP

>> PF08237.6  PE-PPE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.2e-06     0.011      47     114 ..     104     169 ..      74     174 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.2e-06
   PF08237.6  47 gepvvvfGySqGalvaalekarlaasgdpeaddlsFvlignpnrpnggllarfpgglvipilgvtftg 114
                  + v+  G+S G++va+l+ a l+  + pe++++  v++g p   n g+ +++   + +p  g+ ftg
  MMETSP1325-20131115|5663_1 104 SRHVLMTGHSMGGAVAQLASAYLLG-SLPETTSTHLVTVGAPAIGNVGFKRILES-AAVPRGGLRFTG 169
                 5568999******************.788889*****************666655.*****9999986 PP

>> PF11187.3  Protein of unknown function (DUF2974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.19   3.3e+02      36      49 ..      33      46 ..      21      58 .. 0.77
   2 ?    9.3   0.0   0.00035      0.61      83     103 ..     104     124 ..      90     144 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.19
   PF11187.3 36 egtlvvaFRGTddt 49
                ++ +v +FRGT d 
  MMETSP1325-20131115|5663_1 33 RNATVCSFRGTKDA 46
                6778899****775 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00035
   PF11187.3  83 egkiylgGHSKGGnlAvyaaa 103
                 + +++++GHS GG +A+ a+a
  MMETSP1325-20131115|5663_1 104 SRHVLMTGHSMGGAVAQLASA 124
                 45799*************987 PP

>> PF00975.15  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00018      0.31      45     103 ..      85     144 ..      71     150 .. 0.77
   2 ?   -1.6   0.1       1.3   2.3e+03      75      84 ..     177     186 ..     159     188 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00018
                 TTHHHHHHHHHHHHHHHH--S-SEEEE------HHHHHHHHHHHHH..S--CEEEEEESS- CS
  PF00975.15  45 lesieelaeeyaealrqiqpegPyaLfGySlGGllAfevArqLerq..geevasLiliDap 103
                 l+ + ++a+e++  +    ++      G+S+GG +A   ++ L       +  +L+ ++ap
  MMETSP1325-20131115|5663_1  85 LAAWLSIADEVCRVVDGARSR-HVLMTGHSMGGAVAQLASAYLLGSlpETTSTHLVTVGAP 144
                 556667788888888888888.67789*********9999998887666666666666655 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.3
                 ---HHHHHHH CS
  PF00975.15  75 lGGllAfevA 84 
                  GG+lA+e A
  MMETSP1325-20131115|5663_1 177 VGGVLAYEHA 186
                 59*****977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.49u 0.45s 00:00:00.94 Elapsed: 00:00:00.55
# Mc/sec: 1158.97
//
Query:       MMETSP1325-20131115|5664_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|5666_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|5667_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 215.18
//
Query:       MMETSP1325-20131115|5665_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.6   1.5      0.029   14.0   1.1    1.4  1  PF00669.15 Bacterial flagellin N-terminal helical region


Domain annotation for each model (and alignments):
>> PF00669.15  Bacterial flagellin N-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.1   2.1e-06     0.029      40      89 ..      75     125 ..      65     154 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.1e-06
  PF00669.15  40 lgagtaisvslrsqinglsqlsrnnslgisrlqtaqgaleelkdalqr.lk 89 
                  + ++  s+++r+ ++  +q s  n+++ + ++++ + l+++ +a+q+ + 
  MMETSP1325-20131115|5665_1  75 MANNADTSFKMRNSSHIFDQRSMGNNVVVQSMSSMTTSLTQVYSAGQQsMA 125
                 57788899***************************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 898.63
//
Query:       MMETSP1325-20131115|5668_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-12   45.6   0.3      8e-12   45.2   0.2    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
    8.3e-11   41.0   0.3    2.7e-10   39.3   0.1    1.9  2  PF00023.25 Ankyrin repeat
    4.6e-08   32.9   0.1      3e-07   30.3   0.0    2.1  2  PF13857.1  Ankyrin repeats (many copies)
    4.8e-07   29.2   0.0    1.2e-06   28.0   0.0    1.7  1  PF13606.1  Ankyrin repeat
      7e-07   29.4   0.1     0.0021   18.4   0.0    1.8  2  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.2   2.9e-15     8e-12       7      89 .]      32     121 ..      29     121 .. 0.78

  Alignments for each domain:
  == domain 1    score: 45.2 bits;  conditional E-value: 2.9e-15
   PF12796.2   7 ngnlelvklLlekgadvdl.......get.pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89 
                  g ++ v+ +l ++++ d         +t +L l+a+ +nl+ ++  l++ + +++kd++gnt L+lA+++g++++vk++l +ga++++++
  MMETSP1325-20131115|5668_1  32 EGGVSSVERILMEKDNQDEaadlmdrLQTqAL-LCAKTNNLQGLEEVLDQDCFIDTKDEHGNTLLMLAAQQGSKKIVKMMLRRGANIHAQN 121
                 56666666555444333333445446444255.66899*************************************************9986 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         1   2.8e+03       8      24 ..      64      80 ..      62      88 .. 0.65
   2 !   39.3   0.1   9.9e-14   2.7e-10       1      33 []      90     122 ..      90     122 .. 0.98

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1
                HHHHTTHHHHHHHHHHT CS
  PF00023.25  8 lAalrgnlevvklLlsq 24
                l+a+ +nl+ ++  l+q
  MMETSP1325-20131115|5668_1 64 LCAKTNNLQGLEEVLDQ 80
                56677777766666665 PP

  == domain 2    score: 39.3 bits;  conditional E-value: 9.9e-14
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 +G+T L+lAa+ g++++vk+ l +GA+++aq+d
  MMETSP1325-20131115|5668_1  90 HGNTLLMLAAQQGSKKIVKMMLRRGANIHAQND 122
                 7******************************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0    0.0048        13      22      49 ..      64      91 ..      58      92 .. 0.93
   2 !   30.3   0.0   1.1e-10     3e-07      10      46 ..      85     121 ..      81     123 .] 0.93

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0048
   PF13857.1 22 lAakggalevvrlLlapgadlnlrdsdg 49
                l ak ++l+ +++ l++ + ++++d++g
  MMETSP1325-20131115|5668_1 64 LCAKTNNLQGLEEVLDQDCFIDTKDEHG 91
                5799**********************98 PP

  == domain 2    score: 30.3 bits;  conditional E-value: 1.1e-10
   PF13857.1  10 natdeggntpLhlAakggalevvrlLlapgadlnlrd 46 
                 ++ de+gnt+L+lAa +g+  +v+++l++ga++++++
  MMETSP1325-20131115|5668_1  85 DTKDEHGNTLLMLAAQQGSKKIVKMMLRRGANIHAQN 121
                 6789*****************************9998 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   4.3e-10   1.2e-06       1      30 []      90     119 ..      90     119 .. 0.96

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 4.3e-10
   PF13606.1   1 nGnTpLhlAasngrielveaLlengadina 30 
                 +GnT+L+lAa++g++++v+ +l++ga+i+a
  MMETSP1325-20131115|5668_1  90 HGNTLLMLAAQQGSKKIVKMMLRRGANIHA 119
                 69*************************975 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   7.5e-07    0.0021       8      54 .]      65     111 ..      59     111 .. 0.90
   2 !   15.2   0.0   7.7e-06     0.021       1      32 [.      91     122 ..      91     123 .] 0.92

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 7.5e-07
   PF13637.1   8 aaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 +a+ ++l+ ++  l+++  i+ +de Gnt+L +Aa+ g ++i+k+ l
  MMETSP1325-20131115|5668_1  65 CAKTNNLQGLEEVLDQDCFIDTKDEHGNTLLMLAAQQGSKKIVKMML 111
                 5678899999999999999*************************965 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 7.7e-06
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtde 32 
                 g+t+L+ aa++g  ++vk +l +g++i+++++
  MMETSP1325-20131115|5668_1  91 GNTLLMLAAQQGSKKIVKMMLRRGANIHAQND 122
                 689******************99******975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       466  (0.0340843); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 566.83
//
Query:       MMETSP1325-20131115|5669_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.073   12.4   0.2       0.11   11.9   0.1    1.3  1  PF03522.10 K-Cl Co-transporter type 1 (KCC1)


Domain annotation for each model (and alignments):
>> PF03522.10  K-Cl Co-transporter type 1 (KCC1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   7.9e-06      0.11       2      16 ..       5      19 ..       3      21 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 7.9e-06
  PF03522.10  2 KDRnSiLRLtSvgSD 16
                K R Si  L+S+gSD
  MMETSP1325-20131115|5669_1  5 KRRLSIIELESLGSD 19
                4589*********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 231.37
//
Query:       MMETSP1325-20131115|5670_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 154.76
//
Query:       MMETSP1325-20131115|5672_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|5673_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.23   10.7   1.1        1.1    8.5   0.2    2.4  2  PF02755.10 RPEL repeat


Domain annotation for each model (and alignments):
>> PF02755.10  RPEL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2   8.2e-05       1.1      16      24 ..      11      19 ..       3      21 .. 0.85
   2 ?   -0.1   0.0     0.041   5.7e+02      17      23 ..      47      53 ..      47      53 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 8.2e-05
                HHHCTSS-S CS
  PF02755.10 16 LvernILke 24
                Lv+r+IL++
  MMETSP1325-20131115|5673_1 11 LVQRGILQR 19
                9******97 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.041
                HHCTSS- CS
  PF02755.10 17 vernILk 23
                ++r++L+
  MMETSP1325-20131115|5673_1 47 EKRGVLE 53
                79***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        65  (0.00475424); expected 273.4 (0.02)
Passed bias filter:                       64  (0.0046811); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|5674_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|5675_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|5676_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 642.43
//
Query:       MMETSP1325-20131115|5678_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.069   12.0   0.0      0.081   11.8   0.0    1.0  1  PF05575.6  Vibrio cholerae RfbT protein
      0.072   11.8   0.0      0.081   11.6   0.0    1.0  1  PF02181.18 Formin Homology 2 Domain


Domain annotation for each model (and alignments):
>> PF05575.6  Vibrio cholerae RfbT protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.2e-05     0.081     158     202 ..      12      55 ..       6      60 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.2e-05
   PF05575.6 158 sslyfkkntdiadkvknsqvlvrklssldisptnsvvikidaega 202
                   lyf +  d  d+ +ns +l++k    d+      vik+dae a
  MMETSP1325-20131115|5678_1  12 FDLYFPHAID-KDRNQNSLILLKKGLFTDVEEVTDRVIKMDAEAA 55 
                 5789999888.6999****************************98 PP

>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.2e-05     0.081      77     110 ..      20      54 ..      16      61 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.2e-05
                 S-HHHHHHHHHHCHHH.TS-HHHHHHHHHTTTTCC CS
  PF02181.18  77 LdpkrsqnvaIllrkl.klpaeeivqaileldeev 110
                 +d++r+qn  Ill+k    + ee+++ ++++d+e+
  MMETSP1325-20131115|5678_1  20 IDKDRNQNSLILLKKGlFTDVEEVTDRVIKMDAEA 54 
                 89*************988999***********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 289.22
//
Query:       MMETSP1325-20131115|5679_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 187.95
//
Query:       MMETSP1325-20131115|5671_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-48  165.5  22.8    1.6e-48  165.1  15.8    1.1  1  PF01151.13 GNS1/SUR4 family


Domain annotation for each model (and alignments):
>> PF01151.13  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.1  15.8   1.1e-52   1.6e-48       4     248 ..      51     286 ..      49     288 .. 0.90

  Alignments for each domain:
  == domain 1    score: 165.1 bits;  conditional E-value: 1.1e-52
  PF01151.13   4 sspkvplliallYlllvllgnklmknrkpf....klkalvivhNlflavlSlvtfvgmvksllevltkaglvdllckddssdegrlrngllaflvllfylsKfvEllDTvflvlkkk..qvsfLhvYHHatvmllmwaglryatsspiwffvllNsfvHaimYtYYflaalgakklvvpwkrliTtlQilQfvvgllaavyllvsytlkkvgcdtsqapkaaialnllyllslllLFlnffvksylkkkkk 248
                 ++++++l + ++Yl + +++ ++mk+rk       +k++++v+N+++++l  +++vgm+  +++++      +++c+ + + ++    + +a+++++fy  Kf+E+ DT f++l++   qv+fLh++HH+++ +++ + l++ +s+++++ ++lN++vH++mY++Y+++alg+k    +w++++T+lQ++Qf++++l++++++        +c    ap +a ++ +ly++s+l+LF +ffvk+y++k ++
  MMETSP1325-20131115|5671_1  51 TNLSFLLWANVVYLSVTYILYSIMKDRKTGvndkMIKKVIMVYNAVCVFLAGYVVVGML--YYKMQD---PGKFVCNVSARVDDPDSANFIAWVFWVFYAQKFWEFCDTWFFILRRSfrQVTFLHIFHHSSITFVVGTILKFDYSGDMFLPIFLNALVHVLMYSHYLVTALGIK---SWWRQYLTSLQLAQFCLISLQSAVAYSR----GPSC---GAPDWAKVIMILYMFSMLFLFGKFFVKRYIQKDTS 286
                 5778899999***************9975457779************************..355553...4589995444444555556789999*********************999*****************************************************97...49*******************9998887....4799...78999*************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       694  (0.0507607); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.38s 00:00:01.12 Elapsed: 00:00:00.50
# Mc/sec: 1974.60
//
Query:       MMETSP1325-20131115|5681_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 311.02
//
Query:       MMETSP1325-20131115|5682_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-11   42.7   0.3    2.8e-11   42.6   0.2    1.0  1  PF00152.15 tRNA synthetases class II (D, K and N)


Domain annotation for each model (and alignments):
>> PF00152.15  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.2   2.1e-15   2.8e-11       3      49 ..      13      60 .]      11      60 .] 0.93

  Alignments for each domain:
  == domain 1    score: 42.6 bits;  conditional E-value: 2.1e-15
                HHHHHTHHHHTTSHHHHH.HHHHHHHHHHHHHHHHHHTT-EE----SC CS
                xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00152.15  3 elrlkyryldlrreklqk.nlklrskiikairefldergFleveTPiL 49
                  r+++r+ldl  + + + ++++r++i++ ir++lder+Fle+eTP+L
  MMETSP1325-20131115|5682_1 13 SKRYRQRHLDLIVNPEVRaTFRTRARITSWIRRYLDERDFLEIETPTL 60
                5799*******98887777***************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|5677_1  [L=367]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-26   92.6   4.2    2.3e-26   91.7   2.9    1.4  1  PF12756.2 C2H2 type zinc-finger (2 copies)
  ------ inclusion threshold ------
        1.1    9.3   9.0       0.65   10.0   3.5    2.4  2  PF12171.3 Zinc-finger double-stranded RNA-binding


Domain annotation for each model (and alignments):
>> PF12756.2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.7   2.9   3.4e-30   2.3e-26       2     100 ..      88     185 ..      87     186 .. 0.96

  Alignments for each domain:
  == domain 1    score: 91.7 bits;  conditional E-value: 3.4e-30
   PF12756.2   2 ClfcekeskeveellehmkkehgffipekeylvdleglleylrekieekleClyCekefkslealreHmkkkgHckinyeeeeekkeiekfYdflssde 100
                  lf ++++ +v++ l++m++++gffipe+ey+ d++glleyl++k++ ++ Cl+C+++f+s +a+++Hm +k+Hcki+y+e+++ +e+++fYdf ss++
  MMETSP1325-20131115|5677_1  88 SLFDSHTEPDVHSALDYMRRKYGFFIPEAEYIEDMDGLLEYLHSKVKIGCCCLFCNRTFRSSHACQQHMVDKSHCKIKYDEQADFDELSDFYDF-SSSY 185
                 5899999999************************************************************************************.7665 PP

>> PF12171.3  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.5   9.6e-05      0.65       4      26 ..     139     161 ..     139     161 .. 0.93
   2 ?   -0.2   0.1      0.16   1.1e+03      13      24 ..     315     328 ..     314     331 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 9.6e-05
                 -TTT--B-SSHHHHHHHTT-HHH CS
   PF12171.3   4 CvaCdkyFksenqlknHlksKkH 26 
                 C  C+++F s ++ ++H+  K H
  MMETSP1325-20131115|5677_1 139 CLFCNRTFRSSHACQQHMVDKSH 161
                 9*****************77777 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.16
                 SHHHHHHHTT-..H CS
   PF12171.3  13 senqlknHlks..K 24 
                 se+q+  H  +  +
  MMETSP1325-20131115|5677_1 315 SEKQFVGHQLTqaR 328
                 899**999877555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       496  (0.0362785); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.36s 00:00:01.03 Elapsed: 00:00:00.50
# Mc/sec: 1758.93
//
Query:       MMETSP1325-20131115|5683_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|5685_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.33s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 265.13
//
Query:       MMETSP1325-20131115|5688_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.65
# Mc/sec: 250.70
//
Query:       MMETSP1325-20131115|5686_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|5689_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 533.07
//
Query:       MMETSP1325-20131115|5690_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-20   73.2   0.0    4.9e-20   71.8   0.0    1.7  1  PF08292.7 RNA polymerase III subunit Rpc25


Domain annotation for each model (and alignments):
>> PF08292.7  RNA polymerase III subunit Rpc25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   0.0   3.6e-24   4.9e-20      10     108 ..       2     101 ..       1     141 [] 0.83

  Alignments for each domain:
  == domain 1    score: 71.8 bits;  conditional E-value: 3.6e-24
   PF08292.7  10 kikssseeGikvslgffddifvpkelLpepsefdeeeqaWvweyeeeee.lyldkgeevrfrVeeeifvdvkpkspeeaeeekaeeeeekkekkapyevi 108
                 +i +sse+Gi+vsl+ffdd+f+p   Lp+p+e+d++ ++Wvw+++e+e+  +++  e++r rV++ ++++++++++ ++++++++e++++  k ap++  
  MMETSP1325-20131115|5690_1   2 TIIASSEDGIQVSLDFFDDMFIPSYCLPQPAEYDSRAKLWVWRFDEGEDgGVFTLHEQIRCRVDSITYTSITNTDKGRQATKTSTENSATVAKLAPMQAA 101
                 6899*****************************************66552799***************99999999988866666666666666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|5692_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-05   22.0   0.0    0.00013   21.3   0.0    1.4  1  PF00585.13 C-terminal regulatory domain of Threonine dehydratase
  ------ inclusion threshold ------
      0.051   13.3   0.0      0.055   13.2   0.0    1.1  1  PF13670.1  Peptidase propeptide and YPEB domain


Domain annotation for each model (and alignments):
>> PF00585.13  C-terminal regulatory domain of Threonine dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   1.9e-08   0.00013      35      86 ..       3      60 ..       1      62 [] 0.84

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 1.9e-08
                B.-SEEEEE---SSB-EEEEEEE-......----HHHHHHHHHT----EEECTTT-HH CS
  PF00585.13 35 nniTlfeYrkagaknasiLvgvev......sqaeeldelierleklgykvedlsknea 86
                 n+T+f+Yr   ++ a +++ ++       ++ ++ +  +++l++ gy+v dl+ ne+
  MMETSP1325-20131115|5692_1  3 RNVTEFSYRWSTTNHADVIISFQTigssppKRVQDGEAVQADLRSAGYDVTDLESNEL 60
                56********************98555443344667899*****************96 PP

>> PF13670.1  Peptidase propeptide and YPEB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     8e-06     0.055      22      50 ..      29      57 ..      13      61 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 8e-06
   PF13670.1 22 dapkadwlsreavqakleaqGykvkkiev 50
                ++p++  ++ eavqa l+++Gy+v++ e 
  MMETSP1325-20131115|5692_1 29 SSPPKRVQDGEAVQADLRSAGYDVTDLES 57
                68999999*****************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|5693_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       784  (0.0573435); expected 273.4 (0.02)
Passed bias filter:                      483  (0.0353277); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.44s 00:00:00.92 Elapsed: 00:00:00.53
# Mc/sec: 669.17
//
Query:       MMETSP1325-20131115|5694_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 469.87
//
Query:       MMETSP1325-20131115|5695_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.5   1.0      0.016   15.4   0.7    1.0  1  PF07715.10 TonB-dependent Receptor Plug Domain


Domain annotation for each model (and alignments):
>> PF07715.10  TonB-dependent Receptor Plug Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.7   1.2e-06     0.016      61     108 .]       2      57 ..       1      57 [. 0.90

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.2e-06
                 EEE---BESS........-----TTSTT-BGCCEEEEEEEE------------S-E CS
  PF07715.10  61 vlvDGvpisn........ggsgsgdlssippediervevlkgpasalyGsdaigGv 108
                 +++DG   ++         ++g++++s i++++ie++++  +p  ++   +a g+v
  MMETSP1325-20131115|5695_1   2 IYIDGAVNNDvfglagsgTNGGQTGVSPISIDAIEQFQIQVAPFDVRVSGFAGGAV 57 
                 89****6555*****999999999**********************9999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|5700_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-09   35.0   0.0    5.9e-09   34.8   0.0    1.0  1  PF00852.14 Glycosyltransferase family 10 (fucosyltransferase)


Domain annotation for each model (and alignments):
>> PF00852.14  Glycosyltransferase family 10 (fucosyltransferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.0   4.3e-13   5.9e-09     284     335 ..       2      63 ..       1      67 [. 0.85

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 4.3e-13
  PF00852.14 284 dFsspkeLaeyLkkLdkndeeYrkYfeWrkkykvkalsewee..........plckvCkklq 335
                 dF++pkeLae+L ++ k++++Y+ Y+ W+ +++  +++++++           lc++C++l+
  MMETSP1325-20131115|5700_1   2 DFATPKELAEFLMAVGKDQAKYEAYLGWKINKSQADIDKFQNvidmtgykytSLCRICEQLA 63 
                 9****************************9999966666666666777766677****9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 290.99
//
Query:       MMETSP1325-20131115|5701_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|5703_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-20   72.5   0.0    2.9e-20   72.3   0.0    1.0  1  PF06294.6  Domain of Unknown Function (DUF1042)
    6.2e-06   25.6   0.0    8.3e-06   25.2   0.0    1.3  1  PF11971.3  CAMSAP CH domain
     0.0023   17.5   0.0     0.0036   16.9   0.0    1.3  1  PF08494.6  DEAD/H associated
  ------ inclusion threshold ------
      0.053   13.2   0.0      0.072   12.8   0.0    1.2  1  PF14332.1  Domain of unknown function (DUF4388)
       0.08   12.8   0.0       0.11   12.4   0.0    1.3  1  PF00307.26 Calponin homology (CH) domain


Domain annotation for each model (and alignments):
>> PF06294.6  Domain of Unknown Function (DUF1042)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.0     1e-23   2.9e-20      18     110 ..       2      95 ..       1     106 [. 0.92

  Alignments for each domain:
  == domain 1    score: 72.3 bits;  conditional E-value: 1e-23
   PF06294.6  18 ardFSdgllvaeilkkyyprlvdlsnyeekssvqlKLnnwsrlnekvLkklglk..ltkdvleqiitekpGvaelllhelyallqkkkkrgltsl 110
                 +rdFS+g+l+aei+ +yy ++++++++ ++ ++++K +nw++l  k+++k gl     +++++ ii+++ G++   l  +y +l+++k + + ++
  MMETSP1325-20131115|5703_1   2 KRDFSNGFLIAEIFSRYYDKDIQMHSFDNGIALRIKKDNWGQL-LKFMRKSGLAemTSQEEVNAIIHCEDGAVINFLNRIYEVLTHRKVQEVVKR 95 
                 69*****************************************.*******995435799***************************99988765 PP

>> PF11971.3  CAMSAP CH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0     3e-09   8.3e-06      17      68 ..       2      51 ..       1      69 [. 0.83

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 3e-09
   PF11971.3 17 trdlsDGvaLaalihfYcPklvplediclketmsvadslyNlqllqefceek 68
                +rd+s+G ++a+++++Y+ k +++++ +  +   ++ + +N+ +l +f+ ++
  MMETSP1325-20131115|5703_1  2 KRDFSNGFLIAEIFSRYYDKDIQMHSFD--NGIALRIKKDNWGQLLKFMRKS 51
                59***********************999..******************9875 PP

>> PF08494.6  DEAD/H associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.3e-06    0.0036      36      86 ..       8      56 ..       7      67 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.3e-06
   PF08494.6 36 glllakrlsrrygsevgvaandygivlslpeedaeeleellkelpeeleel 86
                g+l+a+ +sr+y++++++++ d+gi+l++++++  +l + +++  + l e+
  MMETSP1325-20131115|5703_1  8 GFLIAEIFSRYYDKDIQMHSFDNGIALRIKKDNWGQLLKFMRK--SGLAEM 56
                789*****************************63334444443..555444 PP

>> PF14332.1  Domain of unknown function (DUF4388)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.6e-05     0.072      14      49 ..      43      79 ..      42      97 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.6e-05
   PF14332.1 14 qllsqsrktGvLtltsegee.grlyfrdGqivaAesg 49
                qll+ +rk+G  ++ts++e  + ++ +dG +++  + 
  MMETSP1325-20131115|5703_1 43 QLLKFMRKSGLAEMTSQEEVnAIIHCEDGAVINFLNR 79
                99************888887455********987665 PP

>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     4e-05      0.11      26     105 ..       3      81 ..       1      85 [. 0.78

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4e-05
                 HHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS-HHHHHT..ST-HHHHHHHHHHHH CS
  PF00307.26  26 kdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvltledlly..sgnkknvlaflaeLf 105
                 +d+s+G ++a++  +y+ + ++++++  ++  ++  + +N  ++l+f+++  g+ ++++ e++    +     v++fl  ++
  MMETSP1325-20131115|5703_1   3 RDFSNGFLIAEIFSRYYDKDIQMHSF--DNGIALRIKKDNWGQLLKFMRK-SGLAEMTSQEEVNAiiHCEDGAVINFLNRIY 81 
                 79************************..4333788999************.5999999555554333666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 565.95
//
Query:       MMETSP1325-20131115|5704_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 136.93
//
Query:       MMETSP1325-20131115|5707_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.57
# Mc/sec: 925.49
//
Query:       MMETSP1325-20131115|5709_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 371.85
//
Query:       MMETSP1325-20131115|5711_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   11.9   0.0       0.16   11.3   0.0    1.3  1  PF02779.19 Transketolase, pyrimidine binding domain


Domain annotation for each model (and alignments):
>> PF02779.19  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.2e-05      0.16       3      24 ..      36      57 ..      34      58 .] 0.93

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.2e-05
                EEHHHHHHHHHHHHHCC-TTEE CS
  PF02779.19  3 iawrkaeaealaellkedpevv 24
                +a+r+a+++a++e++++d++v+
  MMETSP1325-20131115|5711_1 36 VAIRDALNMAIDEEMERDEKVF 57
                789*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.61
# Mc/sec: 227.85
//
Query:       MMETSP1325-20131115|5712_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|5708_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-11   40.8   0.4    0.00016   20.7   0.1    2.6  2  PF13202.1  EF hand
    7.5e-09   35.4   0.4    5.2e-08   32.8   0.2    2.3  1  PF13499.1  EF-hand domain pair
      1e-07   30.5   0.2    0.00094   18.2   0.1    2.5  2  PF00036.27 EF hand
    8.1e-07   28.3   0.4     0.0016   18.0   0.1    2.7  2  PF13405.1  EF-hand domain
    2.6e-06   26.8   0.9     0.0093   15.4   0.0    2.5  2  PF13833.1  EF-hand domain pair
    0.00028   20.7   4.3    0.00028   20.7   3.0    2.4  3  PF02403.17 Seryl-tRNA synthetase N-terminal domain
    0.00065   19.2   9.9     0.0011   18.5   6.8    1.3  1  PF04156.9  IncA protein
    0.00092   19.0  14.2      0.076   12.8   0.2    3.4  3  PF00170.16 bZIP transcription factor
     0.0035   16.6   4.2     0.0035   16.6   2.9    2.3  2  PF11180.3  Protein of unknown function (DUF2968)
     0.0036   15.3   9.8     0.0045   15.0   6.8    1.1  1  PF05557.8  Mitotic checkpoint protein
     0.0074   15.9   1.3     0.0074   15.9   0.9    2.3  2  PF07889.7  Protein of unknown function (DUF1664)
  ------ inclusion threshold ------
       0.01   14.6   3.3       0.01   14.6   2.3    2.0  2  PF04111.7  Autophagy protein Apg6
      0.011   14.8   2.2      0.039   13.0   0.2    2.0  2  PF04582.7  Reovirus sigma C capsid protein
      0.012   13.8   6.0      0.014   13.5   4.1    1.1  1  PF09726.4  Transmembrane protein
      0.013   15.2   3.2      0.013   15.2   2.2    2.2  2  PF11559.3  Afadin- and alpha -actinin-Binding
      0.027   13.7   2.6       0.16   11.2   1.3    2.1  2  PF05791.6  Bacillus haemolytic enterotoxin (HBL)
      0.032   12.7  12.2      0.066   11.7   5.3    2.0  2  PF08317.6  Spc7 kinetochore protein
      0.038   14.0   4.8       0.29   11.1   1.7    2.5  2  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
      0.039   13.6  18.7       0.15   11.7   5.3    2.5  2  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.048   11.8  11.8      0.063   11.4   8.2    1.1  1  PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
      0.051   11.2   6.1      0.068   10.8   4.2    1.2  1  PF10168.4  Nuclear pore component
      0.055   13.1   1.0      0.055   13.1   0.7    2.9  2  PF07716.10 Basic region leucine zipper
      0.059   12.6   0.0        0.1   11.8   0.0    1.4  1  PF11435.3  RNA binding protein She2p
      0.059   12.4   8.8      0.037   13.1   2.7    2.2  2  PF10234.4  Clusterin-associated protein-1
      0.074   12.9   4.0       0.21   11.5   0.1    2.7  3  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
      0.074   12.1   1.4        0.2   10.7   0.3    2.0  2  PF12017.3  Transposase protein
        0.1   12.5  19.2        1.2    9.0  13.4    2.1  1  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
        0.1   11.8   3.3        1.4    8.0   0.1    2.2  2  PF01452.11 Rotavirus non structural protein
        0.1   11.6  12.4       0.22   10.6   6.8    1.8  1  PF13851.1  Growth-arrest specific micro-tubule binding
       0.13   10.6   9.6       0.17   10.2   6.6    1.1  1  PF05667.6  Protein of unknown function (DUF812)
       0.15   11.9  16.4       0.28   11.0   3.7    2.3  2  PF13863.1  Domain of unknown function (DUF4200)
       0.15   12.0   3.6       0.29   11.1   0.5    2.0  2  PF08702.5  Fibrinogen alpha/beta chain family
       0.15   11.1   1.3       0.28   10.3   0.9    1.3  1  PF05549.6  Allexivirus 40kDa protein
       0.15   12.0   3.3        0.5   10.4   0.2    2.6  2  PF00700.16 Bacterial flagellin C-terminal helical region
       0.16   11.7   4.4        4.8    7.0   0.4    2.8  2  PF05377.6  Flagella accessory protein C (FlaC)
       0.18   11.5   6.7        0.2   11.4   1.0    2.9  2  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.21   11.8  12.7         11    6.2   8.8    2.6  1  PF06156.8  Protein of unknown function (DUF972)
       0.39   10.1  10.4       0.05   13.0   2.2    2.0  2  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
       0.41   10.8   5.0        3.9    7.6   0.4    3.1  2  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.41    8.9   8.7       0.72    8.1   5.7    1.3  1  PF02994.9  L1 transposable element
       0.42   10.8   6.3       0.36   11.0   2.5    2.0  1  PF11418.3  Phi29 scaffolding protein
       0.46    9.2  12.8        4.4    6.0   9.0    2.0  1  PF14362.1  Domain of unknown function (DUF4407)
       0.47    9.5  12.2      0.053   12.6   3.7    2.0  2  PF11932.3  Protein of unknown function (DUF3450)
       0.48    9.5   8.3          3    6.9   5.9    1.9  2  PF11802.3  Centromere-associated protein K
       0.49    8.6   8.0       0.67    8.2   4.5    1.6  1  PF13166.1  AAA domain
       0.58    9.0   6.9       0.25   10.2   2.8    1.5  2  PF11727.3  Invariant surface glycoprotein
       0.64    9.7   7.5        5.4    6.7   1.7    2.4  2  PF02520.12 Domain of unknown function DUF148
       0.66    9.6  11.3        1.1    8.9   6.2    2.0  2  PF09744.4  JNK_SAPK-associated protein-1
          1    7.6   9.0        1.9    6.7   6.2    1.4  1  PF04632.7  Fusaric acid resistance protein family
          1    9.1  12.5        2.4    7.9   8.7    1.7  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein
        1.3    8.9  13.1        2.2    8.1   8.4    1.8  2  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
        1.7    8.5  14.4          2    8.3   2.4    2.2  2  PF09403.5  Adhesion protein FadA
        1.7    8.2  10.8        1.2    8.7   0.1    3.5  2  PF02183.13 Homeobox associated leucine zipper
        2.2    8.0  18.7      1e+02    2.6  13.0    2.2  1  PF03938.9  Outer membrane protein (OmpH-like)
        2.5    7.6  10.1        3.6    7.1   6.2    1.7  2  PF13874.1  Nucleoporin complex subunit 54
        2.7    7.5   9.7       0.91    9.1   0.2    2.8  2  PF11471.3  Maltoporin periplasmic N-terminal extension
        2.8    7.3  18.1        5.3    6.4  12.5    1.4  1  PF00769.14 Ezrin/radixin/moesin family
        3.2    7.8  15.0      0.066   13.3   3.6    2.3  2  PF01519.11 Protein of unknown function DUF16
        3.4    8.0  12.2        1.4    9.2   1.2    2.4  2  PF14357.1  Domain of unknown function (DUF4404)
        4.6    7.1   5.6          6    6.7   0.1    3.3  3  PF06667.7  Phage shock protein B
        4.6    6.2  19.1       0.52    9.3   4.5    2.2  2  PF12072.3  Domain of unknown function (DUF3552)
        5.4    6.5   9.0       0.34   10.3   1.6    2.4  2  PF10224.4  Predicted coiled-coil protein (DUF2205)
        5.9    7.1  10.8        1.8    8.8   1.8    3.0  3  PF03131.12 bZIP Maf transcription factor
        6.1    6.2  16.9        1.2    8.5   0.9    3.3  3  PF04977.10 Septum formation initiator
        6.3    6.4  16.4        1.4    8.4   6.9    2.4  2  PF12325.3  TATA element modulatory factor 1 TATA binding
        7.4    5.3  11.5         13    4.4   8.0    1.4  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   6.6e-06    0.0014       2      22 ..     214     233 ..     213     236 .. 0.86
   2 !   20.7   0.1   7.9e-07   0.00016       3      21 ..     241     259 ..     239     262 .. 0.92

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 6.6e-06
                 HHHHHHH--S----B-HHHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreELk 22 
                 ++ F a+D + DG++sreE  
  MMETSP1325-20131115|5708_1 214 NE-FYAADSDHDGRVSREEAA 233
                 56.99**************65 PP

  == domain 2    score: 20.7 bits;  conditional E-value: 7.9e-07
                 HHHHHH--S----B-HHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreEL 21 
                 +tF+++D++gDG +++ EL
  MMETSP1325-20131115|5708_1 241 ETFDKMDKDGDGAVTMAEL 259
                 58****************9 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.2   2.5e-10   5.2e-08       5      64 ..     215     261 ..     159     263 .. 0.91

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 2.5e-10
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64 
                 +F++ D+d+dg++++ee  +l  h+          e     f+++Dk+gdG ++++E+l+
  MMETSP1325-20131115|5708_1 215 EFYAADSDHDGRVSREEAAKLGSHFT---------ET----FDKMDKDGDGAVTMAELLE 261
                 6****************999999988.........67....****************986 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0022      0.45       6      21 ..     216     231 ..     213     235 .. 0.90
   2 !   18.2   0.1   4.6e-06   0.00094       3      24 ..     240     261 ..     238     263 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0022
                 HHHHCTTTSSEBEHHH CS
  PF00036.27   6 FkefDkDgdGkIsfeE 21 
                 F  +D D+dG++s eE
  MMETSP1325-20131115|5708_1 216 FYAADSDHDGRVSREE 231
                 6679***********9 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 4.6e-06
                 HHHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfke 24 
                  e F+++DkDgdG ++  E++e
  MMETSP1325-20131115|5708_1 240 TETFDKMDKDGDGAVTMAELLE 261
                 689****************975 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0     0.016       3.3       6      21 ..     216     231 ..     214     235 .. 0.90
   2 !   18.0   0.1   7.8e-06    0.0016       2      23 ..     239     260 ..     238     262 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.016
                 -GCC-------B---H CS
   PF13405.1   6 FklfDkdgdGkidaeE 21 
                 F + D d+dG++++eE
  MMETSP1325-20131115|5708_1 216 FYAADSDHDGRVSREE 231
                 8899**********99 PP

  == domain 2    score: 18.0 bits;  conditional E-value: 7.8e-06
                 HH---GCC-------B---HHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELr 23 
                 + e F+++DkdgdG ++ +EL+
  MMETSP1325-20131115|5708_1 239 FTETFDKMDKDGDGAVTMAELL 260
                 6789****************96 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   4.5e-05    0.0093       9      46 ..     198     231 ..     195     239 .. 0.79
   2 !    9.6   0.2    0.0029      0.59      31      47 ..     243     259 ..     237     263 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 4.5e-05
   PF13833.1   9 eLkralallglkg.lseeevdilfrefDtdgdGkisfeE 46 
                 eL       ++++ ++ +++   f+++D d+dG++s eE
  MMETSP1325-20131115|5708_1 198 ELTA-----RQESlVEQQQAVNEFYAADSDHDGRVSREE 231
                 5555.....5666556667999***************99 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0029
   PF13833.1  31 frefDtdgdGkisfeEF 47 
                 f+++D dgdG+++ +E 
  MMETSP1325-20131115|5708_1 243 FDKMDKDGDGAVTMAEL 259
                 99**********98886 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   3.0   1.3e-06   0.00028      28      95 ..      99     170 ..      93     176 .. 0.74
   2 !   14.1   5.4   0.00016     0.032      22     101 ..     121     200 ..     119     207 .. 0.87
   3 ?   -0.0   1.0       3.8   7.8e+02      62      85 ..     189     212 ..     179     222 .. 0.54

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT......HHCCCHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  28 vdelleldeerrelqveleelqaerNelskeIgkakkkk....edaeeliaevkelkeelkaleaelkelea 95 
                  +++ el e r +l +++e l++er ++ k+++ +k++     +++++l ae  + +++++ale+ ++ l a
  MMETSP1325-20131115|5708_1  99 QAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEEResmgQQVNSLQAENTKFSKKVAALEKIVQSLGA 170
                 57899999****************************876555555666666666666666666665555544 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 0.00016
                 .TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  22 gedkedvdelleldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelekll 101
                  e ++  +++ +l eer ++ +++++lqae  + sk+++ + k  +   + + ev+ +   l+++ +e k+  ae+e+l 
  MMETSP1325-20131115|5708_1 121 SEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEELT 200
                 5667777899********************************99999999999999999999998888888877777765 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 3.8
                 TTT..HHCCCHHHHHHHHHHHHHH CS
  PF02403.17  62 akkkkedaeeliaevkelkeelka 85 
                  kk+  + eel a+ ++l e+ +a
  MMETSP1325-20131115|5708_1 189 QKKNLAEQEELTARQESLVEQQQA 212
                 333334555555555555544444 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   6.8   5.2e-06    0.0011      63     185 ..      83     211 ..      58     218 .. 0.51

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 5.2e-06
   PF04156.9  63 kapvqseedekieesrlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr..............eeisdlkeevqelrselerlqedlqrlqeklaelq 185
                 ++ v   + ++ie+        e+++ + el e  ++l +++++l se e+  ++   l+ee++s ++++ sl+ +  +++k+++ l+                 + l++ ++e+++ l++ +e+++r++  ++++q
  MMETSP1325-20131115|5708_1  83 LSLVGGDRMAEIEA--------ELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEkivqslgaslgeveGVERGLEQILDEQKKNLAEQEELTARQESLVEQQQ 211
                 45555555666666........5555555555555555555555555555555555555555555555555555555555555555555554444555555544444444444444444444444444444444444 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.2   0.00037     0.076      29      64 .]      96     131 ..      90     131 .. 0.92
   2 !   11.9   0.3    0.0007      0.14      25      61 ..     134     170 ..     133     173 .. 0.89
   3 ?    1.5   1.5       1.2   2.5e+02      23      43 ..     191     211 ..     189     216 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 0.00037
                 HHHHHHHHHHHHHH.......HHHHHHHHHHHHHH- CS
  PF00170.16  29 eeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                 +eL+ kv+eL + +++L k++e+l+ e +++ ++v+
  MMETSP1325-20131115|5708_1  96 AELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVH 131
                 59*****************************99985 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.0007
                 HHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHH CS
  PF00170.16  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                 k+e e   + v +L+aeN++  k++  l+k v++l +
  MMETSP1325-20131115|5708_1 134 KEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGA 170
                 5677888899***********************9976 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHHHHHHH. CS
  PF00170.16  23 RKkaeieeLeekvkeLeaeNk 43 
                 + +ae+eeL+ + ++L ++ +
  MMETSP1325-20131115|5708_1 191 KNLAEQEELTARQESLVEQQQ 211
                 5689************99876 PP

>> PF11180.3  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.9   1.7e-05    0.0035     108     187 ..      96     175 ..      89     182 .. 0.91
   2 ?   -1.8   2.8       7.2   1.5e+03     126     145 ..     194     213 ..     174     242 .. 0.56

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.7e-05
   PF11180.3 108 aqleaqkaqlerliaasearaerLqadlelareQeaqvaarqkqarkeaaaLeaqreaaqaqLrklqrqirqLqaqqeea 187
                 a+l+a+ ++l ++  +  +++e+L+++ e++ +Q ++++++++ + +++++L+a++++  +++ +l++ +++L a   e+
  MMETSP1325-20131115|5708_1  96 AELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEV 175
                 6799999999999999999******************************************************9887765 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 7.2
   PF11180.3 126 araerLqadlelareQeaqv 145
                 a+ e L a +e   eQ+++v
  MMETSP1325-20131115|5708_1 194 AEQEELTARQESLVEQQQAV 213
                 12222333333333333333 PP

>> PF05557.8  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   6.8   2.2e-05    0.0045     373     496 ..      95     211 ..      75     237 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.2e-05
   PF05557.8 373 lqqLqeelekaaseilelkkkleelkalvrRLqrrlilvtkErdllrailesydkeetetsesnqlskrLkeaedlvqkvqehkaklEsqleeleeevglqKdraktlekeikllkeqllsner 496
                   +Lq+++e+       l k+ e+l+   + + +++  + +Er+ + + ++s++ e+t+ s++ ++       e +vq + +++ ++E     le+ +  qK+  ++ ++e+   +e l+++++
  MMETSP1325-20131115|5708_1  95 EAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAA------LEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAE-QEELTARQESLVEQQQ 211
                 4566666666666666777899999999*********************************99888......99999999999999998556666666666655443.3345544444444444 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.9   3.6e-05    0.0074      50     123 ..     103     176 ..      88     179 .. 0.85
   2 ?    4.0   0.4      0.18        36      44      94 ..     160     210 ..     151     223 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 3.6e-05
   PF07889.7  50 kqlekvseavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLesklesle 123
                 ++l++v +++ +    L ++ + +++++ + ke  +++ ++v++++ + +++++ v +l+++v++L   l ++e
  MMETSP1325-20131115|5708_1 103 EELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVE 176
                 46778888888888888888999999999999999999999999999999999999999999999999998887 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.18
   PF07889.7  44 AvasvtkqlekvseavasakkhLsqridnlddkldeqkeiskeikeevtei 94 
                 A +++ + l+    +v++  + L q +d+  ++l eq+e++ + ++ v + 
  MMETSP1325-20131115|5708_1 160 ALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEELTARQESLVEQQ 210
                 555666666666677888999999999999999999999988766665554 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   2.3   4.9e-05      0.01      65     139 ..      95     169 ..      80     177 .. 0.92
   2 ?   -0.9   2.5       2.6   5.4e+02      68     115 ..     186     232 ..     171     258 .. 0.54

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 4.9e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  65 vealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklkklelekelksle 139
                  ++l+  ++eL      l +++e l++e++ + ++++ l+ee+e + ++ ++ + e +kf+ k   lek ++sl 
  MMETSP1325-20131115|5708_1  95 EAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLG 169
                 56789999*************************************************************999985 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 2.6
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  68 ldseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeee 115
                 ld+ +++L+ + e+l  + e l ++++ ++e  +   ++  +++ ee+
  MMETSP1325-20131115|5708_1 186 LDEQKKNLAEQ-EELTARQESLVEQQQAVNEFYAADSDHDGRVSREEA 232
                 23333333332.233444444444445555544444444444444444 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   0.00019     0.039      57     144 ..      90     174 ..      69     183 .. 0.61
   2 ?    6.1   0.1     0.024         5      43     115 ..     157     228 ..     151     241 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00019
   PF04582.7  57 klsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevdanstdisnlksdvsanglnitd 144
                 ++++++a+lq  ++ l++v+++l    ++v++l+s  +++  ++  l e  ++  + + slq e    s +++ l+  v + g ++ +
  MMETSP1325-20131115|5708_1  90 RMAEIEAELQAKVEELGEVRSTLG---KQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGE 174
                 566677777777777777776653...4555555555555566666666666666666666666666666666666666555554444 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.024
   PF04582.7  43 ataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaals 115
                  +a+l++ v+s+ ++l +++   +++ + ld+ k +l e ++e++a q+s+ +    ++++    s+hd  +s
  MMETSP1325-20131115|5708_1 157 KVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAE-QEELTARQESLVEQQQAVNEFYAADSDHDGRVS 228
                 456777888888888888888888888899999999988.678999999999999999999999999998877 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   4.1   6.8e-05     0.014     428     532 ..      96     207 ..      65     239 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.8e-05
   PF09726.4 428 kkLkaeLsaarkteselrskisllsslerslkselqqlkkendllqtklqelvsakqkekqslqslek.......rLkeerearvsvekqLaeekkrkkeeeetaaravala 532
                 + L+a++++  ++ s l +++++l s+  ++  ++++lk+e + + +++++l  +  k  +++  lek        L+e +     +e+ L+e+kk   e+ee  ar  +l 
  MMETSP1325-20131115|5708_1  96 AELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKivqslgaSLGEVEGVERGLEQILDEQKKNLAEQEELTARQESLV 207
                 5677777777888889999*********************************999999888888888722211113445555566788899999998887777666654443 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   2.2   6.4e-05     0.013      52     112 ..     107     167 ..      91     173 .. 0.89
   2 ?    9.3   7.1    0.0042      0.87      52     128 ..     135     211 ..     131     235 .. 0.96

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 6.4e-05
   PF11559.3  52 eqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklkn 112
                 e r +l +++ +l++e e + +++  lk+++e+  +++ +lq++ ++  kk++ le+ +++
  MMETSP1325-20131115|5708_1 107 EVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQS 167
                 6789999*************************************************99876 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0042
   PF11559.3  52 eqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkniiqsik 128
                 e+res+ ++++ l+ae+ + ++k++ l++ +++l   l  ++  er le+ l ++++ l ++ e  +r+++ +++ +
  MMETSP1325-20131115|5708_1 135 EERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEELTARQESLVEQQQ 211
                 89**********************************************************************99865 PP

>> PF05791.6  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.2     0.047       9.8     119     160 ..      91     132 ..      87     150 .. 0.67
   2 ?   11.2   1.3   0.00076      0.16     107     183 ..     111     193 ..     107     194 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.047
   PF05791.6 119 iqknqkevkqlleeLkafknklakdtksfksdvdeltsiLks 160
                 + +++ e ++++eeL + ++ l k ++++ s+ + + +  + 
  MMETSP1325-20131115|5708_1  91 MAEIEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHA 132
                 667888888889999999999999888888877665554444 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00076
   PF05791.6 107 tlkeglekLqeeiqknqkevkqlleeLkaf...knklakdtksfksdvdeltsiLksqg...adieklkkeieklqeeikedl 183
                 tl +++e+L++e  +  k+v++l ee + +    n+l+ + ++f+++v+ l +i +s g   +++e +++ +e++ +e+k++l
  MMETSP1325-20131115|5708_1 111 TLGKQVETLRSEREAMGKQVHALKEERESMgqqVNSLQAENTKFSKKVAALEKIVQSLGaslGEVEGVERGLEQILDEQKKNL 193
                 555666666666555555555555544433111456677778888888888777777663347899999*********99986 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.8     0.036       7.4     148     198 ..      92     142 ..      89     145 .. 0.77
   2 ?   11.7   5.3   0.00032     0.066     152     227 ..     138     215 ..     128     233 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.036
   PF08317.6 148 eglkeeLeenleelkedeellnkklelinsilpklrekkealkeelasLrq 198
                   +++eL+ ++eel e    l k++e + s  +++ ++ +alkee +s+ q
  MMETSP1325-20131115|5708_1  92 AEIEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQ 142
                 567788888888888888888888888888888888888888888777655 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00032
   PF08317.6 152 eeLeenleelkedeellnkklelinsilpklrekkealkeelasLrqlkde..leecdseeleklreeLssleekiee 227
                 e++ +++++l++++++ +kk++++++i+++l + + +++   + L+q+ de   + +++eel + +e L++ ++ ++e
  MMETSP1325-20131115|5708_1 138 ESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEqkKNLAEQEELTARQESLVEQQQAVNE 215
                 4567899*****************************************999889999**************9999985 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1      0.23        49      34      70 ..      99     135 ..      89     138 .. 0.83
   2 ?   11.1   1.7    0.0014      0.29      10      66 ..     131     187 ..     123     212 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.23
   PF10046.4  34 aekykeleqkakslekeleklkqkyeelkpylqqide 70 
                  +k++el+++ + l k++e+l ++ e + +++  ++e
  MMETSP1325-20131115|5708_1  99 QAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKE 135
                 5688999999999999999999999999999888875 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.0014
   PF10046.4  10 kyveaeleisaedlklLeklNeataekykeleqkakslekeleklkqkyeelkpylq 66 
                   +++e e++ ++++ L+  N++ ++k++ le++++sl  +l + ++ +  l++ l+
  MMETSP1325-20131115|5708_1 131 HALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILD 187
                 556778888889999999999999999999999999999999999888877776665 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.8    0.0017      0.36      15      68 ..      96     149 ..      92     150 .. 0.96
   2 ?   11.7   5.3   0.00074      0.15      12      72 ..     142     202 ..     141     211 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0017
   PF12329.3  15 aqLmeEgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleelee 68 
                 a+L+ + e+L      + +++  Lr++ +++ k++  lk++ e+  +++++l++
  MMETSP1325-20131115|5708_1  96 AELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQA 149
                 79*************************************************996 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00074
   PF12329.3  12 eqIaqLmeEgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerlkr 72 
                 +q++ L+ E  k skk +++++++ +L +++ e e   + l++ l+++ k l+e ee+  r
  MMETSP1325-20131115|5708_1 142 QQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEELTAR 202
                 6999*******************************99999999999999888888887655 PP

>> PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   8.2    0.0003     0.063     175     324 ..      97     243 ..      82     259 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0003
   PF07888.6 175 eLeaaLatsekkteeLkekykeissseeeiseerniLsaqraenrerileLeddiqtlskkvreqeklleqlkeikaelerekaelkqrlkektvqikdeeteaidlqleleslkekLrsaqelles.sqqkatllgeeLaslaslrdrti 324
                 eL+a ++   +    L ++++ + s +e + ++  +L+ +r    +++  L+ +   +skkv   ek++++l +   e e  +  l+q l e     k +++e+ +l +  esl e+ +++ e  ++ s++   + +ee a+l+s    t+
  MMETSP1325-20131115|5708_1  97 ELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDE----QKKNLAEQEELTARQESLVEQQQAVNEFYAAdSDHDGRVSREEAAKLGSHFTETF 243
                 3333444444455668899999999999999999*******99*******************999999888888777777777666666555....5667889999999**********99998655388888899999999999766665 PP

>> PF10168.4  Nuclear pore component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   4.2   0.00033     0.068     584     687 ..      98     211 ..      81     230 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00033
   PF10168.4 584 lreerkslseaaekLaekfeeikerqellvrrlkkllqslns...qLPvlseserdlkkelqrinkqlrslaaaleqvk.......kkldkqrkkiekqeslkkssleLsekqr 687
                 l+ + + l e    L  + e  + ++e++ +++++l ++ +s   q+  l   +  ++k + +++k ++sl+a+l +v+       + ld q+k++++qe+l      L e+q+
  MMETSP1325-20131115|5708_1  98 LQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESmgqQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEgvergleQILDEQKKNLAEQEELTARQESLVEQQQ 211
                 566667889999999999***********999999876544322145444445568*****************9877642222222568999*****99999999999988775 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.4      0.13        27      27      54 .]      95     122 ..      92     122 .. 0.93
   2 ?   13.1   0.7   0.00026     0.055      24      53 ..     134     163 ..     132     164 .. 0.95

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.13
  PF07716.10  27 eeeleervkeLeeeNaqLrqkveqLeke 54 
                 e+el+ +v+eL e  ++L ++ve+L+ e
  MMETSP1325-20131115|5708_1  95 EAELQAKVEELGEVRSTLGKQVETLRSE 122
                 689**********************976 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00026
  PF07716.10  24 kakeeeleervkeLeeeNaqLrqkveqLek 53 
                 k++ e++ ++v++L++eN ++ +kv++Lek
  MMETSP1325-20131115|5708_1 134 KEERESMGQQVNSLQAENTKFSKKVAALEK 163
                 8999************************97 PP

>> PF11435.3  RNA binding protein She2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00048       0.1      28      83 ..     113     172 ..      91     179 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00048
                 HTT-GGGHHHHHHHHHHHHHHH....HHHHHHHH--GG----TTTS-BHHHHHHHHHHHH CS
   PF11435.3  28 lrrvstlrferstlikyvkkLr....flndvllsyelaeeeldseeeslekvvkplgsyl 83 
                  ++v tlr er ++ k v  L+     + + + s ++ +++ +++   lek+v+ lg+ l
  MMETSP1325-20131115|5708_1 113 GKQVETLRSEREAMGKQVHALKeereSMGQQVNSLQAENTKFSKKVAALEKIVQSLGASL 172
                 489***************999733335777888888889999**************9865 PP

>> PF10234.4  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.7   0.00018     0.037     152     236 ..      97     184 ..      75     193 .. 0.81
   2 ?    1.4   0.1      0.64   1.3e+02     100     156 ..     206     262 ..     191     268 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 0.00018
   PF10234.4 152 kalsrplelaevekalkeaikelaeelqklkaelenlksdeanLeekiekkkqelertqkrLkalqsvr...PafleEyeklEeeLkk 236
                 +  ++  el ev  +l ++++ l +e + + +++++lk++++++ +++++ ++e ++ +k+  al+++     a l E e +E+ L++
  MMETSP1325-20131115|5708_1  97 ELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVqslGASLGEVEGVERGLEQ 184
                 4456788999999999999999999999999999999999999999999999999999999999998742224677777777777765 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.64
   PF10234.4 100 eeeeeeskakvdlssklsdlkaarqlaseitekgakLydlLekeldlkesrqkalsr 156
                   e++++ +++ +++  +d +  r+ a+++ ++ ++ +d ++k+ d   ++ + l++
  MMETSP1325-20131115|5708_1 206 LVEQQQAVNEFYAADSDHDGRVSREEAAKLGSHFTETFDKMDKDGDGAVTMAELLES 262
                 34666799999999999************************9998887777776655 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       6.8   1.4e+03      39      47 ..     131     139 ..      98     166 .. 0.50
   2 ?   11.5   0.1     0.001      0.21      63     109 ..     186     231 ..     183     235 .. 0.91
   3 ?    1.2   0.0       1.5   3.2e+02      60      76 ..     243     259 ..     237     265 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 6.8
   PF10591.4  39 elekeaekk 47 
                 + +ke+ ++
  MMETSP1325-20131115|5708_1 131 HALKEERES 139
                 222222111 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.001
   PF10591.4  63 lDtnkdkvlsksElaplraplvklehCikeffksCDadkdkkisleE 109
                 lD +k ++ +++El++ +++lv+ ++ ++ef  ++D d+d+++s eE
  MMETSP1325-20131115|5708_1 186 LDEQKKNLAEQEELTARQESLVEQQQAVNEFY-AADSDHDGRVSREE 231
                 899999999*********************97.58*********999 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 1.5
   PF10591.4  60 FnqlDtnkdkvlsksEl 76 
                 F+++D++ d+ ++ +El
  MMETSP1325-20131115|5708_1 243 FDKMDKDGDGAVTMAEL 259
                 77788888887777777 PP

>> PF12017.3  Transposase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.63   1.3e+02      19      50 ..     115     146 ..      95     149 .. 0.60
   2 ?   10.7   0.3   0.00096       0.2      14      59 ..     145     190 ..     132     198 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.63
   PF12017.3  19 enkslrkkiralekelkslrqqleeskqleks 50 
                 + ++lr + +a+ k+++ l+++ e + q  +s
  MMETSP1325-20131115|5708_1 115 QVETLRSEREAMGKQVHALKEERESMGQQVNS 146
                 44556666666666666666555554444444 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00096
   PF12017.3  14 kaillenkslrkkiralekelkslrqqleeskqlekslkkiftetq 59 
                 ++++ en+++ kk+ alek ++sl   l e + +e++l++i+ e++
  MMETSP1325-20131115|5708_1 145 NSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQK 190
                 56889************************************98765 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  13.4    0.0057       1.2      19     140 .]      95     215 ..      87     215 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0057
   PF10473.4  19 adlLkdkvenLErELelseenqelvileaenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervseLeklnsslknlLeekeqekvqikeesktavemLqtqlkeLnE 140
                 ++ L+ kve+L     ++ ++ e++  e e   ++v +Lk++ e m ++++ L+ +  + +++   L k +q     + e e +   l+++L+e+ ++++ ++ee+ +  e L  q + +nE
  MMETSP1325-20131115|5708_1  95 EAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQ-KKNLAEQEELTARQESLVEQQQAVNE 215
                 35566677777666666666667777777777777777777777777777777777777777777777777777777777777777777777665.45677788888888888888888777 PP

>> PF01452.11  Rotavirus non structural protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1    0.0069       1.4      55     137 ..      58     143 ..      47     168 .. 0.73
   2 ?    4.4   0.3     0.088        18      95     151 ..     178     234 ..     165     255 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0069
  PF01452.11  55 kvalkvskssykvikvvvvtilntllrlaGykeevvskdeleklidr...ivkelreqlkviekltkreleqvellkriydklvvk 137
                 +va + s+  + v+++ v  +l +ll l+G +     + el+++++    +   l +q++ +    +    qv+ lk+  + +  +
  MMETSP1325-20131115|5708_1  58 RVAFNASGGVWAVVQTLVASVLRVLLSLVGGDRMAEIEAELQAKVEElgeVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQ 143
                 78999999**********************99998889999888876111445566666665544444447888888877776544 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.088
  PF01452.11  95 leklidrivkelreqlkviekltkreleqvellkriydklvvkkaeeidmsketnrk 151
                 +e+ +++i+ e ++ l+  e+lt r+   ve  + + +     ++++  +s+e   k
  MMETSP1325-20131115|5708_1 178 VERGLEQILDEQKKNLAEQEELTARQESLVEQQQAVNEFYAADSDHDGRVSREEAAK 234
                 7888999*******************9999999999999999999999999998776 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   6.8     0.001      0.22      33     115 ..     127     209 ..     110     219 .. 0.36

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.001
   PF13851.1  33 keeiaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqr 115
                  +++ +lk++ e+  ++++++++en + +++++++e+ v+ L   l + e   + L+++  + k++  e ++l+ ++e+l ++
  MMETSP1325-20131115|5708_1 127 GKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEELTARQESLVEQ 209
                 22333333333333333333333333333333333333333333333333333333333333333333333333333333333 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   6.6    0.0008      0.17     321     466 ..      99     249 ..      87     267 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0008
   PF05667.6 321 drtkerekel.ealqeqidelessieeveeeikalkskikeveeeleevkeeneeleeevkikkrtvelledaeenv....akLqalveasserlleLaqqWeahrkpLidelrelkekarekedet.krkleeikklrekikeleselqtk 466
                 +++ e+  e+ + l +q++ l+s+ e + ++ +alk +++ + ++++  ++en++  ++v   +++v+ l ++  +v    + L++++++ +++l+e +++  a ++ L+++ ++ +e  +   d   +   ee +kl ++  e+ +++ ++
  MMETSP1325-20131115|5708_1  99 QAKVEELGEVrSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVegveRGLEQILDEQKKNLAE-QEELTARQESLVEQQQAVNEFYAADSDHDgRVSREEAAKLGSHFTETFDKMDKD 249
                 33333333432357789999999999999999999999999999999999999999999999999999999999999888899*******9999999.8999999*****999998887655444430334566666666666666666655 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.7    0.0014      0.28      30     107 ..      91     168 ..      89     169 .. 0.93
   2 ?    6.3   2.3     0.037       7.7      12      42 ..     182     212 ..     178     220 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0014
   PF13863.1  30 lkereeelekkqeelqeslikfnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekleekleey 107
                 ++e e+el++k eel e      k ++    +re+  k +++ k+e++++ +++++l+a+ ++  ++ ++le+ ++++
  MMETSP1325-20131115|5708_1  91 MAEIEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSL 168
                 78899999999999999999999**************************************************99975 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.037
   PF13863.1  12 vqlaldakreeierkeeelkereeelekkqe 42 
                 +++ ld+++++++++ee+ +++e+ +e++q+
  MMETSP1325-20131115|5708_1 182 LEQILDEQKKNLAEQEELTARQESLVEQQQA 212
                 578899********99999988888888876 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.47        98      23      64 ..     108     149 ..     106     153 .. 0.82
   2 ?   11.1   0.5    0.0014      0.29      27      91 ..     147     210 ..     144     228 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.47
                 HHHCHCCCCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHH CS
   PF08702.5  23 iqdlldkyekdvdkkieklenlLeqlanktkeieelvksike 64 
                 ++++l k+ ++++ + e + ++++ l+++ +++ ++v+s++ 
  MMETSP1325-20131115|5708_1 108 VRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQA 149
                 678888888999999999999999999999999999988876 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.0014
                 HCCCCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHH CS
   PF08702.5  27 ldkyekdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavskslekki 91 
                 l+  +++++kk+  le+ +++l ++  e+e + + ++++l e++k+  ++++   a ++sl ++ 
  MMETSP1325-20131115|5708_1 147 LQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEEL-TARQESLVEQQ 210
                 788899**********************************9999998877666.44555544433 PP

>> PF05549.6  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.9    0.0013      0.28      57     141 ..      94     179 ..      89     214 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0013
   PF05549.6  57 ishdvdsiinklnpvsllsqttlLselrdalrtltklldklksvekklelsae..tasdskllkklesietsleelhakldelssse 141
                 i+ +++  +++l++v   + ++++  lr++ +++ k+++ lk+  +++ ++ +  +a+++k  kk++++e+ +++l+a l e+   e
  MMETSP1325-20131115|5708_1  94 IEAELQAKVEELGEV-RSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNslQAENTKFSKKVAALEKIVQSLGASLGEVEGVE 179
                 666667777888888.4557889999****************999988777662256778999***************998876544 PP

>> PF00700.16  Bacterial flagellin C-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.2    0.0024       0.5       6      46 ..     100     140 ..      96     163 .. 0.86
   2 ?    1.4   0.2       1.6   3.3e+02      24      44 ..     185     205 ..     155     213 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0024
  PF00700.16   6 eaitqltevrsqlGavqnRlesaienlknqsenlkaaisri 46 
                   +++l evrs+lG   + l s  e++++q+  lk+++ ++
  MMETSP1325-20131115|5708_1 100 AKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESM 140
                 568899*****************************998877 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 1.6
  PF00700.16  24 Rlesaienlknqsenlkaais 44 
                  l+++ +nl+ q+e++++++s
  MMETSP1325-20131115|5708_1 185 ILDEQKKNLAEQEELTARQES 205
                 356666777777777777766 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.4     0.039       8.2       1      35 [.     101     135 ..      90     139 .. 0.79
   2 ?    7.0   0.4     0.023       4.8       7      40 ..     135     168 ..     129     175 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.039
   PF05377.6   1 kideLEnklsklstvvatvrkeleelsksvekike 35 
                 k++eL +  s l  +v+t+r+e e + k+v  +ke
  MMETSP1325-20131115|5708_1 101 KVEELGEVRSTLGKQVETLRSEREAMGKQVHALKE 135
                 55666666666667799999999999999999988 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.023
   PF05377.6   7 nklsklstvvatvrkeleelsksvekikenvkdv 40 
                 ++  ++  +v+++++e+   sk+v  +++ v+ +
  MMETSP1325-20131115|5708_1 135 EERESMGQQVNSLQAENTKFSKKVAALEKIVQSL 168
                 555677788*******************999875 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.0   0.00097       0.2      23      77 ..     111     168 ..      69     175 .. 0.84
   2 ?    3.0   0.8      0.39        81      34      60 ..     174     200 ..     152     218 .. 0.54

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00097
   PF06103.6  23 klkktldevnktvkkltkqvdgitketeellaktnelleD...vneKvetldpvfqav 77 
                  l k ++++++  + + kqv+ +++e e + ++ n+l+ +   +++Kv++l++++q+ 
  MMETSP1325-20131115|5708_1 111 TLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAEntkFSKKVAALEKIVQSL 168
                 567778999999999**********************976333677777777777764 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.39
   PF06103.6  34 tvkkltkqvdgitketeellaktnell 60 
                  v+++++ +++i+ e ++ la+++el+
  MMETSP1325-20131115|5708_1 174 EVEGVERGLEQILDEQKKNLAEQEELT 200
                 244555556666666666666666554 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   8.8     0.054        11       5      58 ..     111     186 ..      89     250 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.054
   PF06156.8   5 elfdklseleeqleelleeleelkkelkelleenaelkleneklrerleelee......................e 58 
                  l +++++l ++ e++ +++++lk+e +++ ++ ++l+ en+k+ ++++ le+                       
  MMETSP1325-20131115|5708_1 111 TLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKivqslgaslgevegvergleqiL 186
                 5678999999999999999999999999999999999999999999999998877677666655554544444431 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.2   0.00024      0.05      82     146 ..      96     158 ..      86     170 .. 0.82
   2 ?    9.7   5.3    0.0025      0.52      72     148 ..     121     198 ..     113     223 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00024
   PF07106.8  82 eelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtkee 146
                 +el+++v+el +  s+l k+ + L se   e + +++  lk+e e + ++++sl+++n++++k+ 
  MMETSP1325-20131115|5708_1  96 AELQAKVEELGEVRSTLGKQVETLRSER--EAMGKQVHALKEERESMGQQVNSLQAENTKFSKKV 158
                 5789999999999999999999999987..89999999999999999999999999999888764 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.0025
   PF07106.8  72 eelnkldaeieelreevqelkqeiselekelkkLtselt.teelleeiqelkkeveeieekLeslkeankevtkeeie 148
                 +e + + +++++l+ee +++ q++++l++e  k +++    e++ +++     eve +e  Le++ ++ k+  +e+ e
  MMETSP1325-20131115|5708_1 121 SEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAaLEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEE 198
                 5778999***************************99983134455555555556777778888776655543333222 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.4     0.019       3.9      15      34 ..     153     172 ..      71     187 .. 0.66
   2 ?    7.5   0.6      0.02       4.2      16      53 ..     154     195 ..     151     218 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.019
   PF05531.7  15 avddkVdalqqqvddvqenl 34 
                 + ++kV al++ v+++ + l
  MMETSP1325-20131115|5708_1 153 KFSKKVAALEKIVQSLGASL 172
                 22333333333333333333 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.02
   PF05531.7  16 vddkVdalqqqvddvqenlpdvteln....ekLdaqsaqLae 53 
                  ++kV al++ v+++ + l +v+ ++    + Ld+q ++Lae
  MMETSP1325-20131115|5708_1 154 FSKKVAALEKIVQSLGASLGEVEGVErgleQILDEQKKNLAE 195
                 689****************99997651111556666666665 PP

>> PF02994.9  L1 transposable element
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.7    0.0035      0.72      58     151 ..     117     208 ..     103     219 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0035
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXX..........................XXXXXXXX CS
   PF02994.9  58 kslredveakakevqkvlkelkeiitkqvevlieeeekslkelmelkkklkelkeeveaikkeqseatld.ietlkkksgvvdlsisnriqelee 151
                 + lr + ea +k+v+  lke +e + +qv+ l+ e+ k  k++  l+k ++ l   +  +    +e  l+ i + +kk+ + +  +++r + l e
  MMETSP1325-20131115|5708_1 117 ETLRSEREAMGKQVH-ALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVE--GVERGLEqILDEQKKNLAEQEELTARQESLVE 208
                 579999999999999.999*************************99999999987666555..34444432444555555555566666665555 PP

>> PF11418.3  Phi29 scaffolding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.5    0.0018      0.36       3      76 ..     136     210 ..     133     219 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0018
                 -HHHHHHHHHHHH-TTS-HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHH---HHHH CS
   PF11418.3   3 eleefeeiLnkLgdaeleeserteaLqklredygsflseyeeltealeklaa.ekedLivsnskLfrqvgltkkk 76 
                 e+e+  +++n L+  + + s +  aL k+ ++ g+ l+e e + + le++   +k++L    +   rq +l +++
  MMETSP1325-20131115|5708_1 136 ERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDeQKKNLAEQEELTARQESLVEQQ 210
                 5789999******999999**************************999876515556655555445888887766 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   9.0     0.021       4.4     147     255 ..      94     219 ..      89     241 .. 0.48

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.021
   PF14362.1 147 lqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaelean..................krkaaleeeraakvaeeqaansandGllaRleAlgeltke 255
                 ++ael+++ +e+ + + ++ +++e+  +++++  G+   + ke++++  +++++l+a++++  +++ a                   + ++++ +e+++++ae+++ ++++  l ++ +A +e+  +
  MMETSP1325-20131115|5708_1  94 IEAELQAKVEELGEVRSTLGKQVET-LRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALekivqslgaslgevegveRGLEQILDEQKKNLAEQEELTARQESLVEQQQAVNEFYAA 219
                 4455555555555555555555553.35555555555555555555555555555555444443333334445555666666666663344444444444444444444444444444444444322 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.7   0.00025     0.053      20     107 ..      92     185 ..      67     195 .. 0.58
   2 ?    1.2   1.3      0.79   1.6e+02      24      57 ..     182     215 ..     164     249 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00025
   PF11932.3  20 a......aasldqaqeaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieetrqeivPl 107
                 a      +a+++++ e+ +   ++ ++ +++ +++ +q  +l++e e++ ++v++l++ n + +k v+  ++ ++sl  ++ e+e +++++  +
  MMETSP1325-20131115|5708_1  92 AeieaelQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQI 185
                 1343344555555555555555566666666666666666666666666666666666666666777777777777777777777777766655 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.79
   PF11932.3  24 ldqaqeaeqkanaaaaqsqkkidkladqtqella 57 
                 l+q++++++k +a++++  ++ ++l +q+q++ +
  MMETSP1325-20131115|5708_1 182 LEQILDEQKKNLAEQEELTARQESLVEQQQAVNE 215
                 4555555555555555555555555555555443 PP

>> PF11802.3  Centromere-associated protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   1.6      0.17        36      94     153 ..      98     157 ..      33     166 .. 0.66
   2 ?    6.9   5.9     0.014         3      59     167 ..     142     247 ..      91     263 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.17
   PF11802.3  94 ldklksdLemvLssvkkknekLkedLereqkfldeqqqildslkelqkelknkvrtlses 153
                 l+   ++L  v s+  k+ e L+ + e   k    +++  +s++++ + l+++ +++s++
  MMETSP1325-20131115|5708_1  98 LQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKK 157
                 444444444444444444444444444444444444444444444444444444444443 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.014
   PF11802.3  59 mqvklLtaeleqWekkvpeiidlkkdvllilGkeeldklksdLemvLssvkkknekLkedLereqkfldeqqqildslkelqkelknkvrtlsesrifselkqkleklk 167
                  qv+ L+ae  ++ kkv+ + +  + +   lG  e++ +++ Le++L   +kkn   +e+L   q+ l eqqq ++ +   +++ + +v +++  ++ s+ ++   k+ 
  MMETSP1325-20131115|5708_1 142 QQVNSLQAENTKFSKKVAALEKIVQSLGASLG--EVEGVERGLEQILD-EQKKNLAEQEELTARQESLVEQQQAVNEFYAADSDHDGRVSREEAAKLGSHFTETFDKMD 247
                 5899999999*****99988888888888888..68999******998.578899999*************************99999999888877776666666555 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.5    0.0032      0.67     294     389 ..     124     230 ..     103     249 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0032
   PF13166.1 294 ekleskieklleelesilse....ekensefkedveelkaelealeeel.......eklekaleeKlkdpfsslelesiadeieeinelvdkinelirkhNekidnl 389
                 e + +++ +l+ee es+ ++    + en++f ++v++l++ ++ l  +l       ++le+ l+e++k++ ++ el++ +++++e +++v+++ +  ++h+ ++++ 
  MMETSP1325-20131115|5708_1 124 EAMGKQVHALKEERESMGQQvnslQAENTKFSKKVAALEKIVQSLGASLgevegveRGLEQILDEQKKNLAEQEELTARQESLVEQQQAVNEFYAADSDHDGRVSRE 230
                 33333333333332222222222256666666665555555555555444443333889999999999999999999999999999999999998888888887764 PP

>> PF11727.3  Invariant surface glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.8    0.0012      0.25      45     160 ..      79     187 ..      78     198 .. 0.73
   2 ?   -0.1   0.1       1.6   3.4e+02      59     114 ..     184     226 ..     175     261 .. 0.42

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0012
   PF11727.3  45 lkkladkvaeeradelvketekfaaeikealervkaylekveslsdsklsdsdkkkikelle...kakdkikealkeakkagreiekaaeevkeaAakalgeeekedtsnskgLskvLk 160
                 l+ l+ +v+ +r  e++ e + +++e+ e  + + + +e+++      + ++  k++ +l e      +++++  +e++k+ +++ +  ++v++ +a   ge e +     +gL+++L+
  MMETSP1325-20131115|5708_1  79 LRVLLSLVGGDRMAEIEAELQAKVEELGEVRSTLGKQVETLR-----SEREAMGKQVHALKEereSMGQQVNSLQAENTKFSKKVAALEKIVQSLGASL-GEVEGV----ERGLEQILD 187
                 678999****************************99999999.....3333344444333330003334455544459999999999999999988888.444333....578999886 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 1.6
   PF11727.3  59 elvketekfaaeikealervkaylekveslsdsklsdsdkkkikellekakdkike 114
                 ++++e +k++ae +e + r ++ +e+ +              ++e++ +  d+  +
  MMETSP1325-20131115|5708_1 184 QILDEQKKNLAEQEELTARQESLVEQQQ-------------AVNEFYAADSDHDGR 226
                 3333333333332222222222222222.............222333333333333 PP

>> PF02520.12  Domain of unknown function DUF148
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   1.0     0.053        11      49     107 ..      91     149 ..      88     156 .. 0.85
   2 ?    6.7   1.7     0.026       5.4      32      91 ..     145     202 ..     140     225 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.053
  PF02520.12  49 keeleknvtavisnLssvdaklsaIldnkslTrkqkkeaiqalkkqlpeevktlffirk 107
                  +e+e++ +a +++L +v + l + ++     r+++ +++ alk++ +   +++ ++++
  MMETSP1325-20131115|5708_1  91 MAEIEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQA 149
                 58999***************************************998876666655555 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.026
  PF02520.12  32 ygvadqyeeFkkkvkakkeeleknvtavisnLssvdaklsaIldnkslTrkqkkeaiqal 91 
                 ++++++ ++F kkv+ + e++ +   a + +   v+  l++Ild ++++ ++++e + a 
  MMETSP1325-20131115|5708_1 145 NSLQAENTKFSKKVA-ALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEE-LTAR 202
                 447777788888887.4556666666777777799********999998888765.4444 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   6.2    0.0055       1.1      23     123 ..      70     169 ..      68     203 .. 0.81
   2 ?    0.0   0.9       2.9     6e+02     107     138 ..     185     215 ..     171     223 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0055
   PF09744.4  23 vvkeLmPlvvrvLEnL...dalvsenqelelelelleedkerLskqyerekelrkqaeekllelEdeleqekkelekkieeleeevrqlelkaknlsdkvsrLe 123
                 vv++L+  v+rvL  L   d ++  + el+ ++e l e +  L kq+e  +++r++  ++++    +l++e+  + +++++l++e+ ++  k+  l++ v +L 
  MMETSP1325-20131115|5708_1  70 VVQTLVASVLRVLLSLvggDRMAEIEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVH----ALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLG 169
                 899999999**999998889999999999999999**************************9....66666777777888888888888888777777666664 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 2.9
   PF09744.4 107 qlelkaknlsdkvsrLeeretelkkeyeslhe 138
                 +l+ ++knl+++  +L+ r+++l ++ ++++e
  MMETSP1325-20131115|5708_1 185 ILDEQKKNLAEQ-EELTARQESLVEQQQAVNE 215
                 344445555554.3455555555555555555 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.2    0.0089       1.9     159     318 ..      72     249 ..      45     268 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0089
   PF04632.7 159 rarlrkrlrdaarllaaalagedaaaa................ararlaadilaleallsfaafesprlrarvralrallarllallallsslarllaalraaaaatppelaalldelaa.alaaeeleaavaaLrarlaalrpeae.adsdtaaallarlaellaeladalaalral 318
                 ++ ++++lr ++ l+ ++  +e +a+                 + ++l ++  a+ +++ +++ e +++ ++v+ l+a +++++  +a+l  + + l+a   + ++  ++l++ lde ++  +++eel a+ ++L ++ +a  +  + + ++  ++ ++++a l +++ ++ +++++ 
  MMETSP1325-20131115|5708_1  72 QTLVASVLRVLLSLVGGDRMAEIEAELqakveelgevrstlgkQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKnLAEQEELTARQESLVEQQQAVNEFYAaDSDHDGRVSREEAAKLGSHFTETFDKMDKD 249
                 5555555555555555555555555545555555566666777788888899999999999**********************************************999*********96334556666666666666666666664444445556666666666666666666655 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   8.7     0.011       2.4      12     129 ..      98     216 ..      90     222 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.011
                 HHHH-HHHHHHGGGG.S--TTT---HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HH----HHHHHHHHHHHHHHHHHHHHHS-S----HHHHHHH CS
   PF07200.8  12 Llqdedkleefvkel.dqvqdlneekeellaqnesLaeenlekepqleelkaqlqdkleelkkleekyeekkqkldel.sskyspealkelLqaaakkadeeseelaekflegeidletF 129
                 L+   ++l e+ + l +qv++l++e+e++ +q+  L ee  +  +q++ l+a+ ++  +++++le+ ++++   l e+   + ++e ++++ ++++++ +e + ++ e ++e ++ +++F
  MMETSP1325-20131115|5708_1  98 LQAKVEELGEVRSTLgKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVeGVERGLEQILDEQKKNLAEQEELTARQ-ESLVEQQQAVNEF 216
                 555556666655555257***********************************************************98899******************999998.9999999999998 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   8.4     0.011       2.2      54     149 ..      99     187 ..      89     219 .. 0.67
   2 ?   -0.3   1.6         4   8.4e+02      34      63 ..     184     212 ..     178     266 .. 0.48

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.011
   PF13094.1  54 eaelekdeekleeLeknakalererkeesknlhpvlqelesevleenalaekedlklseknleptldeellellkqlnkhleslqgnlaqleglke 149
                 +a  e+  e   +L k+++ l++er+ + k+  + l+e++++++++ ++++ e+      ++++++   l++++++l+ +l   +g ++ le++ +
  MMETSP1325-20131115|5708_1  99 QAKVEELGEVRSTLGKQVETLRSEREAMGKQ-VHALKEERESMGQQVNSLQAEN-----TKFSKKVA-ALEKIVQSLGASLGEVEGVERGLEQILD 187
                 445566677788999999*************.999***********99999888.....55666665.5666666666554444444443333322 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 4
   PF13094.1  34 rqlaaelksielLqeeirreeaelekdeek 63 
                 + l   +k +++ +e ++r+e+  e+ ++ 
  MMETSP1325-20131115|5708_1 184 QILDEQKKNLAEQEELTARQESLVEQ-QQA 212
                 33333333333322222222222222.222 PP

>> PF09403.5  Adhesion protein FadA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.4    0.0096         2      19      88 ..      88     156 ..      71     163 .. 0.77
   2 ?    5.3   2.5     0.079        16      35     107 ..     181     248 ..     159     257 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0096
   PF09403.5  19 aeeaaevvselkaleaeYqdLvkkeeaRfeeekeekeaaekevaklkelkaeleeklaklkeesktrfyk 88 
                  +  ae+ +el+a   e  ++     +  e  + e+ea+ k+v  lke + ++ +++  l++e +t+f k
  MMETSP1325-20131115|5708_1  88 GDRMAEIEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAE-NTKFSK 156
                 45566777777777777777777777788899999**************************98.688876 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.079
   PF09403.5  35 eYqdLvkkeeaRfeeekeekeaaekevaklkelkaeleeklaklkeesktrfykdeykkLlkkyeeylkklee 107
                   ++++++ +    ++ +e+e + ++   l e ++ ++e +a +  + + r  ++e  kL +++ e ++k+++
  MMETSP1325-20131115|5708_1 181 GLEQILDEQK----KNLAEQEELTARQESLVEQQQAVNEFYA-ADSDHDGRVSREEAAKLGSHFTETFDKMDK 248
                 4444443322....2234445555556667777777777665.678889999999999999999999999986 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.1    0.0058       1.2      12      38 ..     114     140 ..     110     145 .. 0.72
   2 ?    5.6   0.1     0.055        11      13      40 ..     143     170 ..     138     174 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0058
  PF02183.13  12 rnydaLkaendsLqkEkekLraevlsL 38 
                 ++ ++L++e +++ k++ +L+ e +s+
  MMETSP1325-20131115|5708_1 114 KQVETLRSEREAMGKQVHALKEERESM 140
                 566788888888888888888777665 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.055
  PF02183.13  13 nydaLkaendsLqkEkekLraevlsLke 40 
                 + ++L+aen +  k +++L + v+sL +
  MMETSP1325-20131115|5708_1 143 QVNSLQAENTKFSKKVAALEKIVQSLGA 170
                 6688888888888888888888888865 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6  13.0       0.5     1e+02      35     144 ..      96     195 ..      88     249 .. 0.55

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.5
   PF03938.9  35 kelqaklqeeak......ekqqelqakkkelqkeqknlqseraqlsae..aekakeeelqakeqelqayaqqlqaelqaeqqevlqklidkiadaikkvak.ekgltlVlttskvlyad 144
                 +elqak++e+ +      ++ ++l+++++++ k++++l++er+++ ++    +a+++++ +k+++                   l+k+++++ + + +v + e+gl  +l+++k + a+
  MMETSP1325-20131115|5708_1  96 AELQAKVEELGEvrstlgKQVETLRSEREAMGKQVHALKEERESMGQQvnSLQAENTKFSKKVAA-------------------LEKIVQSLGASLGEVEGvERGLEQILDEQKKNLAE 195
                 23333333332223333344444555555555555555555554444311233444444455555...................55555555555555532245555555555544443 PP

>> PF13874.1  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   1.6       0.1        22      78     126 ..      99     147 ..      90     161 .. 0.55
   2 ?    7.1   6.2     0.017       3.6      44     139 ..     114     209 ..     109     211 .. 0.92

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.1
   PF13874.1  78 kqkhqelshrllkvaakleilrnkgyalsaeeeelrnkleqlekelnap 126
                 ++k  el +    + +++e+lr+ + a+ ++ ++l+++ e++ +++n  
  MMETSP1325-20131115|5708_1  99 QAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSL 147
                 4444455554455666667777777765555555555555555544433 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.017
   PF13874.1  44 eevkqlrerlkeineklkelqkhdletskrieeakqkhqelshrllkvaakleilrnkgyalsaeeeelrnkleqlekelnapaqlkgrleelwar 139
                 ++v++lr+  +++ +++  l++   ++ ++++ +++++++ s+++ ++ + ++ l  +   +++ e+ l++ l++ +k l ++++l +r e+l+ +
  MMETSP1325-20131115|5708_1 114 KQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEELTARQESLVEQ 209
                 5788888888999999*****************************9999999999888889******************************99876 PP

>> PF11471.3  Maltoporin periplasmic N-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.2    0.0044      0.91      33      57 ..      90     114 ..      89     118 .. 0.88
   2 ?    1.0   2.6       1.4     3e+02      37      53 ..     182     198 ..     181     206 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0044
   PF11471.3  33 RLelLEkeLqenkqeLqktkdelkk 57 
                 R++ +E+eLq+  +eL + ++ l k
  MMETSP1325-20131115|5708_1  90 RMAEIEAELQAKVEELGEVRSTLGK 114
                 ****************988887766 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 1.4
   PF11471.3  37 LEkeLqenkqeLqktkd 53 
                 LE+ L+e+k+ L ++++
  MMETSP1325-20131115|5708_1 182 LEQILDEQKKNLAEQEE 198
                 9***********99875 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  12.5     0.026       5.3      13     161 ..      90     230 ..      88     266 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.026
  PF00769.14  13 rleqleeemrkaqkeleeseekaeeleeklkqeeeeaqklekkakeleeekerLeeeaaksekekeeLekevdeaeaevakleeerekkeaeteqlqkelreareaeeeakeellevlaaptapsaavsep..enseklvqgdngeeaskd 161
                 r++++e e++ + +el e  ++   l ++    ++e++++ k+ ++l+ee e + ++ +  + e  + +k+v+++e  v++l  +  + e + + l++ l e++++  e++e l    +a + +   v ++  +n+ +++++d ++ +s++
  MMETSP1325-20131115|5708_1  90 RMAEIEAELQAKVEELGEVRST---LGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLGEVEGVERGLEQILDEQKKNLAEQEE-L----TARQESL--VEQQqaVNEFYAADSDHDGRVSRE 230
                 7777777777777777777654...444555555555555667778888888888888888888888888888888888888888888888888888888888775544443.2....2221111..222233444444444444444443 PP

>> PF01519.11  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   3.6   0.00032     0.066      40     101 ..      92     162 ..      88     177 .. 0.79
   2 ?   -1.0   2.8       9.2   1.9e+03      64      91 ..     180     211 ..     152     251 .. 0.53

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.00032
  PF01519.11  40 tkiEtkvdql.........aqgeqikkltetvekqgeqikelqveqkaqgetlqlilktlekinkrldkle 101
                   iE++++ +         + g+q++ l    e  g+q++ l++e +++g++++++  + +k++k++  le
  MMETSP1325-20131115|5708_1  92 AEIEAELQAKveelgevrsTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALE 162
                 55666666555566777778888888888888889999999999999999999999988888888876666 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 9.2
  PF01519.11  64 k.....qgeqikelqveqkaqgetlqlilktle 91 
                 +       eq k+l  eq++   + ++++++ +
  MMETSP1325-20131115|5708_1 180 RgleqiLDEQKKNLA-EQEELTARQESLVEQQQ 211
                 133333333333332.33333333333333333 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.2    0.0069       1.4       2      81 ..      94     173 ..      93     178 .. 0.88
   2 ?    4.8   2.4      0.16        34      14      62 ..     173     216 ..     160     221 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0069
   PF14357.1   2 lrelLekLheeLeqtdsldeetraeLkelrddieealeeedaseaedeslaerlneaverFeaeHPklagtlrnildsLa 81 
                 ++++L++  eeL ++ s+  ++ + L++ r+ + ++++  +++ ++  + +++l++  ++F ++   l+++++++  sL 
  MMETSP1325-20131115|5708_1  94 IEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSLGASLG 173
                 677888888999999999999****************99777778888999999999999*9999999999999999886 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.16
   PF14357.1  14 eqtdsldeetraeLkelrddieealeeedaseaedeslaerlneaverF 62 
                  +++ ++      L+++ d+ ++ l+e+++  a++esl+e+ ++ v++F
  MMETSP1325-20131115|5708_1 173 GEVEGVER----GLEQILDEQKKNLAEQEELTARQESLVEQQQA-VNEF 216
                 44444333....34555555555555566667788888887655.5555 PP

>> PF06667.7  Phage shock protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       6.5   1.4e+03      33      61 ..      91     119 ..      88     126 .. 0.78
   2 ?    6.7   0.1     0.029         6      41      66 ..     141     166 ..     125     171 .. 0.83
   3 ?    0.5   0.0       2.6   5.3e+02      61      73 ..     182     194 ..     179     196 .. 0.81

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 6.5
   PF06667.7  33 sqglseedekeLeeLlekaekleeRietl 61 
                 ++++++e ++++eeL e  + l + +etl
  MMETSP1325-20131115|5708_1  91 MAEIEAELQAKVEELGEVRSTLGKQVETL 119
                 56677777888888888888888888887 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.029
   PF06667.7  41 ekeLeeLlekaekleeRietlErild 66 
                  +++++L+++  k+++++ +lE+i+ 
  MMETSP1325-20131115|5708_1 141 GQQVNSLQAENTKFSKKVAALEKIVQ 166
                 5899********************97 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 2.6
   PF06667.7  61 lErildaespnwr 73 
                 lE+ild+++ n  
  MMETSP1325-20131115|5708_1 182 LEQILDEQKKNLA 194
                 9*****9998765 PP

>> PF12072.3  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   4.5    0.0025      0.52      67     134 ..      92     159 ..      89     170 .. 0.86
   2 ?    2.3   3.4      0.35        74      91     124 ..     183     215 ..     174     235 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0025
   PF12072.3  67 eelEkelkerrkelqrqEkRllqkeetLdrkeeslekkeekleekekelkqkeqsleekeeeveelve 134
                 +e+E+el+ + +el ++   l ++ etL  + e++ k+ ++l+e+++++ q+ +sl++++++ ++ v+
  MMETSP1325-20131115|5708_1  92 AEIEAELQAKVEELGEVRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVA 159
                 68999***********999999999***9999999999999999999999999999999888887654 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.35
   PF12072.3  91 eetLdrkeeslekkeekleekekelkqkeqslee 124
                 e+ Ld+++++l ++ee l++++++l +++q ++e
  MMETSP1325-20131115|5708_1 183 EQILDEQKKNLAEQEE-LTARQESLVEQQQAVNE 215
                 4556666666655543.55555555555555543 PP

>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.6    0.0016      0.34       8      63 ..     114     168 ..      95     177 .. 0.80
   2 ?   -1.2   0.4       6.7   1.4e+03      11      29 ..     183     200 ..     174     217 .. 0.48

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0016
   PF10224.4   8 eeleklekeekqrlieqvleLqdsLedLseRveaVkeendKLeseNkvLqqYienL 63 
                 +++e l  e ++++ +qv +L++  e + + v++ + en K  +    L++ +  L
  MMETSP1325-20131115|5708_1 114 KQVETLRSE-REAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSL 168
                 566766555.8999999999999999999999999999999988887777766655 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 6.7
   PF10224.4  11 eklekeekqrlieqvleLq 29 
                 e++  e+k++l eq  eL 
  MMETSP1325-20131115|5708_1 183 EQILDEQKKNLAEQ-EELT 200
                 44444555555444.2222 PP

>> PF03131.12  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.3      0.17        36      56      87 ..     103     134 ..      90     135 .. 0.72
   2 ?    8.8   1.8    0.0085       1.8      53      88 ..     128     163 ..     114     170 .. 0.70
   3 ?    0.5   0.5       3.3   6.9e+02      57      84 ..     185     211 ..     176     222 .. 0.57

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.17
  PF03131.12  56 eelekekselaqeveklkeevarlarerdalk 87 
                 eel + +s+l ++ve l++e  ++ ++  alk
  MMETSP1325-20131115|5708_1 103 EELGEVRSTLGKQVETLRSEREAMGKQVHALK 134
                 56777777888888888888888777776665 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0085
  PF03131.12  53 qqkeelekekselaqeveklkeevarlarerdalke 88 
                 +q ++l++e++++ q+v+ l++e++++ +   al++
  MMETSP1325-20131115|5708_1 128 KQVHALKEERESMGQQVNSLQAENTKFSKKVAALEK 163
                 577788888888888888888888888777777665 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 3.3
  PF03131.12  57 elekekselaqeveklkeevarlarerd 84 
                  l+++k++la++ e+l++ + +l+++++
  MMETSP1325-20131115|5708_1 185 ILDEQKKNLAEQ-EELTARQESLVEQQQ 211
                 455566655554.444444444544444 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1     0.016       3.4      27      61 ..      96     130 ..      90     133 .. 0.90
   2 ?    8.5   0.9    0.0056       1.2      20      51 ..     131     162 ..     128     180 .. 0.70
   3 ?   -1.2   2.9       6.3   1.3e+03      33      53 ..     189     209 ..     171     219 .. 0.50

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.016
  PF04977.10  27 aalqaelaklkaeneeLeaevkdLksdedyieeqA 61 
                 a+lqa++++l + +  L ++v+ L+s++++  +q 
  MMETSP1325-20131115|5708_1  96 AELQAKVEELGEVRSTLGKQVETLRSEREAMGKQV 130
                 689**********************9999988876 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0056
  PF04977.10  20 yqlkqeiaalqaelaklkaeneeLeaevkdLk 51 
                 ++lk+e +   +++++l+aen++  ++v+ L+
  MMETSP1325-20131115|5708_1 131 HALKEERESMGQQVNSLQAENTKFSKKVAALE 162
                 56666666667777777777777666666663 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 6.3
  PF04977.10  33 laklkaeneeLeaevkdLksd 53 
                  +k  ae+eeL a+ + L   
  MMETSP1325-20131115|5708_1 189 QKKNLAEQEELTARQESLVEQ 209
                 333333333333333333222 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   6.9     0.007       1.4      20      78 ..     110     168 ..      93     193 .. 0.77
   2 ?   -1.1   1.6       6.3   1.3e+03      62      88 ..     187     213 ..     173     224 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.007
   PF12325.3  20 eklsstirrlEgElaslkeelarLekerdeareEivklteeneelkekkkeleelekel 78 
                 ++l++++  l +E+ ++ +++  L++er+++ +++  l  en ++++k ++le++ + l
  MMETSP1325-20131115|5708_1 110 STLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQSL 168
                 56788888888888888888888888888888888888888888877777766655544 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 6.3
   PF12325.3  62 eelkekkkeleelekeleeleqryett 88 
                 +e k++ +e eel+++ e+l ++++++
  MMETSP1325-20131115|5708_1 187 DEQKKNLAEQEELTARQESLVEQQQAV 213
                 444555555555555555555555544 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   8.0     0.065        13      36     145 ..      95     210 ..      87     235 .. 0.67

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.065
   PF10186.4  36 ketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle...asaqlekrraeqlaklqeeikrt...ksklns.lesltaek 145
                  ++l+ kvee+ e   ++  +++++l++e+++  ++ + +++  e   +++ +++++  + ++++a + + ++   as ++++  ++ l+++++e k+    +++l++ +esl++++
  MMETSP1325-20131115|5708_1  95 EAELQAKVEELGE-VRSTLGKQVETLRSEREAMGKQVHALKEERESMGQQVNSLQAENTKFSKKVAALEKIVQslgASLGEVEGVERGLEQILDEQKKNlaeQEELTArQESLVEQQ 210
                 5667777777776.4444677788888888888888888888888888888777777777777777777766655577777777777777777776665111233333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1197  (0.0875512); expected 273.4 (0.02)
Passed bias filter:                      605  (0.044251); expected 273.4 (0.02)
Passed Vit filter:                       146  (0.0106788); expected 13.7 (0.001)
Passed Fwd filter:                        79  (0.00577823); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              66  [number of targets reported over threshold]
# CPU time: 1.14u 0.74s 00:00:01.88 Elapsed: 00:00:00.85
# Mc/sec: 761.20
//
Query:       MMETSP1325-20131115|5716_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|5717_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.3   0.1       0.13   12.0   0.0    1.2  1  PF11837.3 Domain of unknown function (DUF3357)
       0.27   10.8   4.2       0.55    9.8   2.9    1.6  1  PF11021.3 Protein of unknown function (DUF2613)


Domain annotation for each model (and alignments):
>> PF11837.3  Domain of unknown function (DUF3357)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.9e-05      0.13      22      85 ..      39     105 ..      23     114 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.9e-05
   PF11837.3  22 sarrrrpl..kvllavlsslllllllvall.vvskgqspdgdeaaessseespesaapvsRGvseGV 85 
                  ++++rp+    ++ ++++ ++l + + ++  + +  +++ ++++++  e+++++  ++  Gv++GV
  MMETSP1325-20131115|5717_1  39 DEEKKRPFsdGEIAGLAVACAVLGVSIGVVfAKMTATHAAASSEGAKGVEKMTATHSATDSGVAKGV 105
                 567888886645555666666666665555435555555556667777777777777799******9 PP

>> PF11021.3  Protein of unknown function (DUF2613)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.9   8.1e-05      0.55       5      37 ..      52      85 ..      49     107 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 8.1e-05
   PF11021.3  5 lvpavASaVvGlaLGav.AvfGvtlvvqqdskpe 37
                ++ avA aV+G+++G+v A + +t ++ + +  +
  MMETSP1325-20131115|5717_1 52 AGLAVACAVLGVSIGVVfAKMTATHAAASSEGAK 85
                5679***********9868888888877766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 601.53
//
Query:       MMETSP1325-20131115|5718_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.054   13.4   0.4        1.9    8.6   0.0    3.0  3  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.061   8.3e+02       6      19 ..       8      22 ..       6      25 .. 0.78
   2 ?    8.6   0.0   0.00014       1.9       4      19 ..      31      47 ..      30      50 .. 0.85
   3 ?   -0.2   0.0      0.12   1.6e+03      10      21 ..      66      78 ..      59      79 .. 0.75

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.061
                EETSSBCB.CHHHHH CS
  PF00560.28  6 dLsgNnlt.slppsl 19
                ++ +N l+ +lp  +
  MMETSP1325-20131115|5718_1  8 SVKHNTLSgTLPTQF 22
                567999999999876 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00014
                EEEETSSBCB.CHHHHH CS
  PF00560.28  4 eLdLsgNnlt.slppsl 19
                 Ld+ +N+lt ++p  l
  MMETSP1325-20131115|5718_1 31 NLDFTNNKLTgEIPTQL 47
                69***********9865 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.12
                SBCB.CHHHHHHH CS
  PF00560.28 10 Nnlt.slppslsn 21
                N++  ++p  +++
  MMETSP1325-20131115|5718_1 66 NSFNgTIPTTFKS 78
                8888889998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 469.87
//
Query:       MMETSP1325-20131115|5719_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 222.52
//
Query:       MMETSP1325-20131115|5722_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 469.69
//
Query:       MMETSP1325-20131115|5723_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 366.79
//
Query:       MMETSP1325-20131115|5725_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-45  153.7   0.3    4.7e-45  153.5   0.2    1.1  1  PF00012.15 Hsp70 protein
    0.00019   20.0   0.0    0.00035   19.1   0.0    1.3  1  PF06723.8  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.5   0.2   6.8e-49   4.7e-45     111     303 ..       1     205 [.       1     208 [] 0.92

  Alignments for each domain:
  == domain 1    score: 153.5 bits;  conditional E-value: 6.8e-49
                 XHHHHHHHHHHHHHHHHHHHHSS.XXEEEEEEXTTXXHHHHHHHHHHHHHXXXEEEEEEEHHHHHHHHXXXTTSX...XEEEEEEEEXXXXEEEEEEEEE......X......XEEEEEEEEEETTXXXXHHHHHHHHHHHHHHHHHSS..XGGGSHHHHHHHHHHHHHHHHHTTCSSCSEEEEEEEEEETXTEEEEEEEEHHHHHHH CS
  PF00012.15 111 tpeeisamvLkklketaeaylgekvtdavitvPaYFndaqRqatkdAgkiAGLnvlRivneptaaalaYGldkkd..kernvlvfDlGggtfdvSileie......d......GvfevkatagDthlGGedfDealvehlveefkkkegi.dlskdkkalqrLreaaekaKkeLSsssqteinleietldedgkdlsekltRakfeeL 303
                 +pee++am+L++ +e ++++ g++++d+v+tvP++++ ++Rqa  +A +iA ++vl ++ e taaal YG d+     +++vl++ +G ++++vS+ + +      +      G+fev a   D +lGG dfD +l+e +++ef+++ g+ d+++ ++a+ +Lr +a k K  LS+  +tei+++i++l + + d+++++tRa fee 
  MMETSP1325-20131115|5725_1   1 SPEELTAMMLTHAREFTKDFGGKEIRDCVLTVPSFYTVHERQALVSAVEIAQMKVLSLIEENTAAALQYGKDRVFdeANHTVLFYNMGAASTQVSVATYGaysgkeNgknksiGIFEVNAKTWDANLGGTDFDMVLTELFADEFNTQWGKgDVREFPRAMAKLRAQALKTKHVLSA--NTEIPVKINSLHD-DLDFKTHITRAAFEEA 205
                 69********************************************************************9986545899****************9986443443233344489********************************8877*************************..9***********9.**************95 PP

>> PF06723.8  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   5.1e-08   0.00035      74     165 ..       6     100 ..       3     107 .. 0.79

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 5.1e-08
                 HHHHHHHHHHHH-----SS--EEEE-------HHHHHHHHH--------EEEE--HHHHHH------.T.TS----.EEEE-----EEEEEE--- CS
   PF06723.8  74 aeellkyfikkvkkkkslskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglp.v.eepsgn.mvvdiGggttevavislg 165
                 ++ +l +  + +k+    +    v++vPs  t  er+A+  a++ a  +   liee  aAA+  g + v +e++ + +  ++G+ +t+v+v ++g
  MMETSP1325-20131115|5725_1   6 TAMMLTHAREFTKDFGGKEIRDCVLTVPSFYTVHERQALVSAVEIAQMKVLSLIEENTAAALQYGKDrVfDEANHTvLFYNMGAASTQVSVATYG 100
                 666777766666666666777899*************************************97776534144443314569**********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 977.34
//
Query:       MMETSP1325-20131115|5727_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   12.5   0.1       0.06   12.0   0.1    1.1  1  PF00016.15 Ribulose bisphosphate carboxylase large chain, catalytic domain


Domain annotation for each model (and alignments):
>> PF00016.15  Ribulose bisphosphate carboxylase large chain, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   4.4e-06      0.06     108     148 ..      75     115 ..      62     122 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.4e-06
                 --GGGGEEEEE------BHHHHHHHHHSSEEEE-------- CS
  PF00016.15 108 geviimvdllvggytantslakwarknevlLhlhraghavv 148
                 +     +++  gg ta +++ ++ar   vl h hr+ h vv
  MMETSP1325-20131115|5727_1  75 EGHFLNHQVRRGGLTARQGVLRFARATRVLTHRHRSVHEVV 115
                 555666777789**************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 908.62
//
Query:       MMETSP1325-20131115|5724_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.3   0.0       0.12   12.0   0.0    1.6  1  PF02617.12 ATP-dependent Clp protease adaptor protein ClpS


Domain annotation for each model (and alignments):
>> PF02617.12  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   8.7e-06      0.12      18      62 ..      80     124 ..      76     135 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.7e-06
  PF02617.12  18 tmefVievLqkvfgmteeqAeqimlevhreGravvgvgtleeaet 62 
                 t+++V+  L+   +m e +A+++++ + ++G + +g+ +++e+  
  MMETSP1325-20131115|5724_1  80 TVSYVVGQLCYTLQMPETDAMEHATFAQEQGLSCLGTWSRKECLD 124
                 789*************************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.32s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1602.27
//
Query:       MMETSP1325-20131115|5728_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.4   1.6       0.63    9.8   0.6    2.1  2  PF10676.4 Spore germination protein gerPA/gerPF


Domain annotation for each model (and alignments):
>> PF10676.4  Spore germination protein gerPA/gerPF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.024   3.3e+02      31      54 ..      37      60 ..      33      65 .. 0.85
   2 ?    9.8   0.6   4.6e-05      0.63      35      59 ..     115     138 ..      99     151 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.024
   PF10676.4 31 ansKsyaGaGsfntGdflntnnav 54
                a s++++G ++ + +d++  +++v
  MMETSP1325-20131115|5728_1 37 ARSRVFGGRATTSSADVVGLHTSV 60
                67899***********99877765 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 4.6e-05
   PF10676.4  35 syaGaGsfntGdflntnnavsatnv 59 
                 + aGaG+++t+ f++t  + s t+ 
  MMETSP1325-20131115|5728_1 115 AGAGAGASTTASFSSTAAGTS-TTI 138
                 568999************999.554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 773.82
//
Query:       MMETSP1325-20131115|5729_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   11.6   0.1      0.047   11.6   0.1    1.0  1  PF03566.8 Peptidase family A21


Domain annotation for each model (and alignments):
>> PF03566.8  Peptidase family A21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   3.5e-06     0.047     573     607 ..       2      35 ..       1      41 [. 0.82

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 3.5e-06
                 CCG-XXXXHHHHHHXXXXXXXXXXXXHHHHXXXTT CS
   PF03566.8 573 atdNfagavsalaakilasilkseatasvikgvae 607
                 a++Nf g++   +a++ +s  k + t svik+v  
  MMETSP1325-20131115|5729_1   2 ADYNFLGTMLMCIATVASS-IKMVTTHSVIKQVRS 35 
                 79*******9888766555.599*********965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|5730_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   13.1   2.3      0.091   12.9   1.6    1.1  1  PF07336.6 Protein of unknown function (DUF1470)


Domain annotation for each model (and alignments):
>> PF07336.6  Protein of unknown function (DUF1470)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.6   6.7e-06     0.091      30      67 ..      13      49 ..      11      58 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.7e-06
   PF07336.6 30 laWlraaglvpagaaaaaallaaaraLRealrrlfaaa 67
                +  ++++g ++a+ a++ a   ++ + R++lr++f+a 
  MMETSP1325-20131115|5730_1 13 HPVFARHGHRVARLADEGAH-KQVEECRARLRQAFEAD 49
                567899*************9.***************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|5731_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.9    6.1  12.0        5.5    6.2   8.3    1.0  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   8.3    0.0004       5.5      62      78 ..       9      25 ..       2      39 .] 0.40

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0004
   PF10500.4 62 sssssssssssssssss 78
                ssss ssssss s s +
  MMETSP1325-20131115|5731_1  9 SSSSLSSSSSSCSTSAQ 25
                22222222222233322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 186.92
//
Query:       MMETSP1325-20131115|5735_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.43    9.8   4.5       0.16   11.2   1.5    1.4  2  PF13567.1 Domain of unknown function (DUF4131)
        2.1    8.6   5.3        1.8    8.8   0.7    2.2  2  PF03203.9 MerC mercury resistance protein


Domain annotation for each model (and alignments):
>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.78   5.3e+03      43      54 ..      24      35 ..      12      41 .. 0.53
   2 ?   11.2   1.5   2.4e-05      0.16      17      84 ..      85     153 ..      74     160 .. 0.68

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.78
   PF13567.1 43 lllglllllagl 54
                l++++++  +gl
  MMETSP1325-20131115|5735_1 24 LVIMVFVTSVGL 35
                223333333333 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 2.4e-05
   PF13567.1  17 lllalllalllllllflkr.rkrrrlllllglllllaglylllrapqpssndlsrllesgkevtveGvv 84 
                 +l+a l++ l++ l++ ++  ++ r + ll++l+ ++++++++r + p+  +l +  + + + +v  vv
  MMETSP1325-20131115|5735_1  85 VLAAGLILPLAYSLWVSFSrARSARQRSLLFVLMSVGAMWWGYRKHGPALLNLASTYPLEATSVVSFVV 153
                 334444444444433333337778889999999999999999999999998888887766555555555 PP

>> PF03203.9  MerC mercury resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1     0.044     3e+02      31      56 ..      11      36 ..       6      40 .. 0.72
   2 ?    8.8   0.7   0.00027       1.8      43      70 ..     111     138 ..      85     160 .. 0.65

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.044
   PF03203.9 31 glllleelfhelllvvalliallall 56
                g+ l+++ +++ llv+++ +  + l+
  MMETSP1325-20131115|5735_1 11 GVRLTSHDAEHGLLVIMVFVTSVGLW 36
                45568888888888888888877776 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00027
   PF03203.9  43 llvvalliallalllgyrkhrsllvlvl 70 
                   ++++l+++ a+++gyrkh+ +l+ + 
  MMETSP1325-20131115|5735_1 111 RSLLFVLMSVGAMWWGYRKHGPALLNLA 138
                 34578889999*********97766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 888.65
//
Query:       MMETSP1325-20131115|5740_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|5742_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   13.5   1.2       0.12   12.4   0.8    1.6  1  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.8   8.7e-06      0.12       1      18 [.      42      59 ..      36      64 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.7e-06
   PF13516.1  1 lknLtsLdLsnNqigdeG 18
                +++L  LdLs+N+++de 
  MMETSP1325-20131115|5742_1 42 NTSLLRLDLSRNDLTDEE 59
                46677889********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 311.98
//
Query:       MMETSP1325-20131115|5741_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.045   11.3   3.8      0.051   11.1   2.7    1.0  1  PF05758.7 Ycf1
       0.67    8.3   3.6       0.75    8.1   2.5    1.0  1  PF06082.6 Bacterial putative lipoprotein (DUF940)
          1    9.6   6.0       0.24   11.6   0.3    2.0  2  PF13882.1 C-terminal domain of Fibronectin type III


Domain annotation for each model (and alignments):
>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.7   1.1e-05     0.051     215     306 ..      26     126 ..       4     137 .. 0.51

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.1e-05
   PF05758.7 215 griPspiltkkl.kelseieerseeekkkeieaesekkrakqeqeeeeeedsslaseekedkdkideqeekkveek..........kekesilkkkisqekkk 306
                 g +     ++     +se +  + ++++++ ++  e+k+++++ +  e+e ++  +  k+  dki+++++++ +++          ++ ++++kkk   ekk 
  MMETSP1325-20131115|5741_1  26 GTTAAGSYNSDHeRANSEFQA-QVDKERNDYKRGLEAKEKAKKTKLAEKEAKKAHDAAKKLDDKIQKRKDIAARQAemrggavpnaHKAQKYRKKK-AAEKKA 126
                 444433333333122233333.34444444555555566666666666666777788888899999999999999966666666532222222222.222222 PP

>> PF06082.6  Bacterial putative lipoprotein (DUF940)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.5   0.00016      0.75     236     320 ..      37     131 ..      13     137 .. 0.66

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00016
   PF06082.6 236 lnfnelkap.kldkapapvksr.........paaaaesaesldtavrkvlaellakaglelerialdgdtltvelenvkyrdeaealgrvarvla 320
                  +  +++ + ++dk+++++k+           + a+++a+++ +a +k  ++ ++++++ +++ +++g ++    + +kyr+++ a +++a+ ++
  MMETSP1325-20131115|5741_1  37 HERANSEFQaQVDKERNDYKRGleakekakkTKLAEKEAKKAHDAAKKLDDKIQKRKDIAARQAEMRGGAVPNAHKAQKYRKKKAAEKKAAAKAK 131
                 3333333333444444444444321100000333333448888889999999**********************************999998665 PP

>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   5.3e-05      0.24      14      91 ..      10      85 ..       8      96 .. 0.62
   2 ?   -0.2   1.6      0.24   1.1e+03      56      71 ..     111     123 ..      80     137 .. 0.35

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5.3e-05
   PF13882.1 14 aiallllillivclikr.srggkysvkekedakldpeeqpkkdeefeeysreedekelkresqssedeekkkesseDsl 91
                 ++l l++ ++ c+       g y+ +++e a+ + ++q +k+   ++y+r  + ke+ ++++ +e+e kk ++    l
  MMETSP1325-20131115|5741_1 10 LLVLWLVVAMVACYLPGtTAAGSYN-SDHERANSEFQAQVDKE--RNDYKRGLEAKEKAKKTKLAEKEAKKAHDAAKKL 85
                4677788888889666514566777.78888888888876666..5667776666666555555555444444443333 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.24
   PF13882.1  56 eefeeysreedekelk 71 
                 ++ ++y++++    ++
  MMETSP1325-20131115|5741_1 111 HKAQKYRKKKA---AE 123
                 11222222111...11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1909  (0.139628); expected 273.4 (0.02)
Passed bias filter:                      690  (0.0504681); expected 273.4 (0.02)
Passed Vit filter:                        74  (0.00541252); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.40s 00:00:01.03 Elapsed: 00:00:00.53
# Mc/sec: 623.96
//
Query:       MMETSP1325-20131115|5744_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0011   18.8   0.0     0.0015   18.4   0.0    1.2  1  PF08669.6 Glycine cleavage T-protein C-terminal barrel domain


Domain annotation for each model (and alignments):
>> PF08669.6  Glycine cleavage T-protein C-terminal barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.1e-07    0.0015      55      93 ..       2      51 ..       1      53 [. 0.92

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.1e-07
                E-S----EEEEEEE.............ETT-----EEEEE----EEEEEEE CS
   PF08669.6 55 ySptlgknialayvr............teharigteveveirgkriratvv 93
                y++tlg+ ++l +++            +++ r+gt +ev+++g r++a+v+
  MMETSP1325-20131115|5744_1  2 YGHTLGGAVGLTMIEpqksssehvpitKAYIREGT-WEVDVAGVRYPAEVS 51
                99************8899********999999988.9************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 357.10
//
Query:       MMETSP1325-20131115|5746_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-13   50.3   0.0    1.7e-13   50.2   0.0    1.0  1  PF00069.20 Protein kinase domain
    1.3e-09   37.4   0.0    1.6e-09   37.1   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
     0.0038   16.5   0.0     0.0045   16.2   0.0    1.1  1  PF02145.10 Rap/ran-GAP


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   3.7e-17   1.7e-13       5      98 ..      23     126 ..      19     127 .] 0.87

  Alignments for each domain:
  == domain 1    score: 50.2 bits;  conditional E-value: 3.7e-17
                 EEEE----EEEEEEEETTCCE......EEEEEEEEGGGHHHHHHHHHHH....HHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HH CS
  PF00069.20   5 eklGsGsfGkVykakkkktgk......kvAvKilkkeeekskkektavr....ElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklsee 98 
                  ++G+G+fGkV  ++kk+t++       +A+K++ k++  +k +++ +     E ++l+ l+++++++++++f+++d++y+v++++ ggdl  +++++  +se+
  MMETSP1325-20131115|5746_1  23 IIIGEGGFGKVNAVIKKNTKTkegkdqWYAIKTMAKKQILKKSNNHGLDmlfnERNLLADLKSDFLINMHHCFQDEDSCYIVMDLMLGGDLRFHMARRDFFSEN 126
                 579********888888887777888889999999999998888776658888***************************************999988887775 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   3.4e-13   1.6e-09       4      94 ..      22     119 ..      19     125 .. 0.84

  Alignments for each domain:
  == domain 1    score: 37.1 bits;  conditional E-value: 3.4e-13
                 EEEE-------EEEEEEET..TTTSSEEEEEEEEE.CT....TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHH CS
  PF07714.12   4 gkklGeGafGkVvegtlkg..ekekkevkVavKtl.ke....saeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrk 94 
                 +  +GeG fGkV   + k+  +ke k++  a+Kt+ k+    +++++  +++++e +++ +lk + +++++ ++ +e++++iv++++ gGdL+  + +
  MMETSP1325-20131115|5746_1  22 QIIIGEGGFGKVNAVIKKNtkTKEGKDQWYAIKTMaKKqilkKSNNHGLDMLFNERNLLADLKSDFLINMHHCFQDEDSCYIVMDLMLGGDLRFHMAR 119
                 5679********988888887888889999***9953334423444448999****************************************987766 PP

>> PF02145.10  Rap/ran-GAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   9.9e-07    0.0045      92     164 ..      16      93 ..      12     104 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 9.9e-07
  PF02145.10  92 skefnpnii..ksqfnhvliviqplknsssks.klykvsivkksevpefgpllpekiisek..slpslvrtkainaer 164
                 +++f+++ii  ++ f +v++vi++ +++++ + ++y ++++ k+++ + +  +   +++++   l++l    +in ++
  MMETSP1325-20131115|5746_1  16 KHHFDFQIIigEGGFGKVNAVIKKNTKTKEGKdQWYAIKTMAKKQILKKSNNHGLDMLFNErnLLADLKSDFLINMHH 93 
                 5669999993345699*******9877655445*************99888888777777655666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       636  (0.0465184); expected 273.4 (0.02)
Passed bias filter:                      479  (0.0350351); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 585.26
//
Query:       MMETSP1325-20131115|5748_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-11   44.8   2.2      2e-11   43.9   1.5    1.5  1  PF12796.2  Ankyrin repeats (3 copies)
    1.2e-06   27.9   3.5      0.041   13.6   0.1    3.1  3  PF00023.25 Ankyrin repeat
    2.8e-06   27.5   0.2     0.0021   18.4   0.0    2.1  2  PF13637.1  Ankyrin repeats (many copies)
    3.9e-06   26.4   1.0      0.014   15.5   0.0    3.1  3  PF13606.1  Ankyrin repeat
    4.7e-06   26.5   0.1    6.6e-06   26.0   0.0    1.2  1  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.029   14.4   0.3      0.043   13.9   0.2    1.4  1  PF12375.3  Phage protein
       0.16   12.1   1.5       0.17   11.9   1.0    1.1  1  PF06078.6  Bacterial protein of unknown function (DUF937)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   1.5     1e-14     2e-11       4      69 ..       3      75 ..       1      77 [] 0.95

  Alignments for each domain:
  == domain 1    score: 43.9 bits;  conditional E-value: 1e-14
   PF12796.2  4 AaengnlelvklLlekgadvdl......getpLhlAaeagnleivklLle.agadvnakdkegntpLhlAvrn 69
                A++ g+l  ++ L+e+ga++ +      g+t+L +A e+g+ ++v  L+e +ga+v+a  k+g t+Lhl++++
  MMETSP1325-20131115|5748_1  3 AVQAGDLAQLNALIEAGAEIQRkhetrgGKTALLHAFENGQAAAVHELMEkHGANVQAVAKDGSTALHLCASA 75
                9*********************999999999******************989******************987 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1     0.005       9.9       9      28 ..       3      22 ..       2      25 .. 0.90
   2 !   13.6   0.1   2.1e-05     0.041       2      31 ..      31      61 ..      30      63 .. 0.94
   3 !    8.5   0.0   0.00085       1.7       1      11 [.      64      74 ..      64      76 .. 0.90

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.005
                HHHTTHHHHHHHHHHTTSST CS
  PF00023.25  9 AalrgnlevvklLlsqGAdl 28
                A++ g+l  +  L+++GA++
  MMETSP1325-20131115|5748_1  3 AVQAGDLAQLNALIEAGAEI 22
                899999999*********98 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 2.1e-05
                SCBHHHHHHHTTHHHHHHHHHH.TTSSTTHB CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLls.qGAdlnaq 31
                G T+L  A ++g++  v  L + +GA++ a+
  MMETSP1325-20131115|5748_1 31 GKTALLHAFENGQAAAVHELMEkHGANVQAV 61
                89**************************986 PP

  == domain 3    score: 8.5 bits;  conditional E-value: 0.00085
                TSCBHHHHHHH CS
  PF00023.25  1 dGfTPLHlAal 11
                dG T+LHl+a+
  MMETSP1325-20131115|5748_1 64 DGSTALHLCAS 74
                8*******996 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0     1e-06    0.0021       8      51 ..       3      48 ..       1      51 [. 0.91
   2 !    8.5   0.0    0.0013       2.6      18      44 ..      48      75 ..      45      76 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1e-06
   PF13637.1  8 aaisgrlelvklLlekgidinrt..desGntaLhiAalrgnieilk 51
                a+++g+l  ++ L+e g++i r+   + G taL  A ++g+  +++
  MMETSP1325-20131115|5748_1  3 AVQAGDLAQLNALIEAGAEIQRKheTRGGKTALLHAFENGQAAAVH 48
                788999******************99**************987775 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0013
   PF13637.1 18 klLlek.gidinrtdesGntaLhiAalr 44
                + L ek g+++ ++ ++G taLh++a++
  MMETSP1325-20131115|5748_1 48 HELMEKhGANVQAVAKDGSTALHLCASA 75
                55665449999999999*******9986 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.032        63       9      28 ..       3      22 ..       2      23 .. 0.80
   2 !   15.5   0.0   6.9e-06     0.014       2      28 ..      31      58 ..      30      60 .. 0.89
   3 ?    4.4   0.0     0.025        49       1      11 [.      64      74 ..      64      76 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.032
   PF13606.1  9 AasngrielveaLlengadi 28
                A++ g ++ ++aL+e+ga i
  MMETSP1325-20131115|5748_1  3 AVQAGDLAQLNALIEAGAEI 22
                66677777799******987 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 6.9e-06
   PF13606.1  2 GnTpLhlAasngrielveaLle.ngadi 28
                G T+L +A +ng+ ++v++L e +ga++
  MMETSP1325-20131115|5748_1 31 GKTALLHAFENGQAAAVHELMEkHGANV 58
                78*******************9458998 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.025
   PF13606.1  1 nGnTpLhlAas 11
                +G T+Lhl as
  MMETSP1325-20131115|5748_1 64 DGSTALHLCAS 74
                689*****997 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   3.4e-09   6.6e-06       1      55 [.      15      71 ..      15      72 .. 0.94

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 3.4e-09
   PF13857.1  1 Llehg.padvnatdeggntpLhlAakggalevvrlLl.apgadlnlrdsdgltaldl 55
                L+e+g  ++  ++ +gg t+L  A ++g++ +v +L  ++ga+  +  +dg tal+l
  MMETSP1325-20131115|5748_1 15 LIEAGaEIQRKHETRGGKTALLHAFENGQAAAVHELMeKHGANVQAVAKDGSTALHL 71
                788888888999999****************************************98 PP

>> PF12375.3  Phage protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   2.2e-05     0.043      16      54 ..       3      43 ..       2      73 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.2e-05
   PF12375.3 16 rltpkdlawlsltveqarewrrmmeearaa.sqagvats.r 54
                 ++++dla+l++++e ++e +r +e +    ++++   + +
  MMETSP1325-20131115|5748_1  3 AVQAGDLAQLNALIEAGAEIQRKHETRGGKtALLHAFENgQ 43
                589****************9999998887666666555532 PP

>> PF06078.6  Bacterial protein of unknown function (DUF937)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.0   8.7e-05      0.17      39      88 ..       9      58 ..       1      71 [. 0.72

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.7e-05
   PF06078.6 39 lpallgglgagaalggntaapgGlgallsalqqkghgdqlqswvg.gglnq 88
                l +l + ++aga  +++ ++ gG +all a+++ g  +++ +++  +g n 
  MMETSP1325-20131115|5748_1  9 LAQLNALIEAGAEIQRKHETRGGKTALLHAFEN-GQAAAVHELMEkHGANV 58
                55555666666888888****************.66677777777655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      446  (0.0326214); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.62
# Mc/sec: 297.61
//
Query:       MMETSP1325-20131115|5749_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 200.42
//
Query:       MMETSP1325-20131115|5750_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 135.79
//
Query:       MMETSP1325-20131115|5751_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0093   15.1   0.7      0.055   12.7   0.0    2.5  3  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.011   14.8   0.1       0.04   13.1   0.0    1.9  2  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       0.5   3.4e+03      19      24 ..      36      41 ..      35      42 .. 0.77
   2 ?   -0.3   0.0       0.1     7e+02       5      11 ..      58      64 ..      55      65 .. 0.80
   3 !   12.7   0.0   8.1e-06     0.055       4      20 ..      80      96 ..      76      99 .] 0.83

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 0.5
                HHHHHH CS
   PF13202.1 19 eELkrl 24
                eEL +l
  MMETSP1325-20131115|5751_1 36 EELAAL 41
                899887 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.1
                HHHH--S CS
   PF13202.1  5 FrafDlN 11
                 +++D+N
  MMETSP1325-20131115|5751_1 58 MDKADMN 64
                6899*99 PP

  == domain 3    score: 12.7 bits;  conditional E-value: 8.1e-06
                HHHHH--S----B-HHH CS
   PF13202.1  4 tFrafDlNgDGkIsreE 20
                ++ a+D+N DGk++ ++
  MMETSP1325-20131115|5751_1 80 ALAAMDVNADGKVDYKD 96
                5789*********9775 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.42   2.9e+03       4      12 ..      56      64 ..      56      65 .. 0.75
   2 ?   13.1   0.0   5.8e-06      0.04       7      23 ..      82      98 ..      80      99 .] 0.87

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.42
                HHHHHHCTT CS
  PF00036.27  4 eaFkefDkD 12
                e+++++D +
  MMETSP1325-20131115|5751_1 56 ELMDKADMN 64
                578888876 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 5.8e-06
                HHHCTTTSSEBEHHHHH CS
  PF00036.27  7 kefDkDgdGkIsfeEfk 23
                + +D++ dGk+++++++
  MMETSP1325-20131115|5751_1 82 AAMDVNADGKVDYKDMV 98
                679***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      406  (0.0296957); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 456.23
//
Query:       MMETSP1325-20131115|5752_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 364.66
//
Query:       MMETSP1325-20131115|5753_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 423.97
//
Query:       MMETSP1325-20131115|5754_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 229.85
//
Query:       MMETSP1325-20131115|5757_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 469.49
//
Query:       MMETSP1325-20131115|5756_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 974.17
//
Query:       MMETSP1325-20131115|5758_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-12   46.2   0.0    0.00017   21.2   0.0    3.2  3  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.2e-08   0.00017       1      39 []      45      83 ..      45      83 .. 0.94
   2 ?    0.3   0.0     0.047   6.5e+02      11      27 ..      96     113 ..      88     117 .. 0.67
   3 !   20.4   0.0   2.3e-08   0.00031       8      37 ..     149     178 ..     145     180 .. 0.94

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.2e-08
                TEEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  1 geckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                gec+ + + H ++++ ++f+ + +ll ++S+D++ r+ d
  MMETSP1325-20131115|5758_1 45 GECLLEDQVHDKSINRISFNKEKTLLYTASADCKARMVD 83
                68999999**************************99865 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.047
                 SSSEEEEEEESS.STEEE CS
  PF00400.27  11 tspVtcvafspd.gplla 27 
                   pV+++  +p+  ++++
  MMETSP1325-20131115|5758_1  96 DRPVNAIVQHPTkDHVIL 113
                 589********9444444 PP

  == domain 3    score: 20.4 bits;  conditional E-value: 2.3e-08
                 ESSSSSEEEEEEESSSTEEEEEETTSEEEE CS
  PF00400.27   8 rgHtspVtcvafspdgpllasgSrDgtirl 37 
                 +gH +p++++a++pdg+  +sg +Dg irl
  MMETSP1325-20131115|5758_1 149 KGHFGPINALAVNPDGSSYCSGAEDGYIRL 178
                 8****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.31s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 1042.86
//
Query:       MMETSP1325-20131115|5760_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-12   46.1   0.0    9.1e-12   45.2   0.0    1.5  1  PF00035.20 Double-stranded RNA binding motif


Domain annotation for each model (and alignments):
>> PF00035.20  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   6.7e-16   9.1e-12       1      67 []      13      84 ..      13      84 .. 0.85

  Alignments for each domain:
  == domain 1    score: 45.2 bits;  conditional E-value: 6.7e-16
                HHHHHHHHHHHCT.SECEEEEEEEECTTSSS-EEEEEEEE....--CEEE.E--BSSHHHHHHHHHHHHHHHH CS
  PF00035.20  1 pkskLqelcqkkg.kppnyeyvseegpphslkkFtvtvkv....ngklyg.tGvgssKKeAeqlAAekALqkL 67
                p+  L+ l+q ++ ++p++++  +eg +h+ ++F++++ v      +++  + ++s+KK+A+++AA+ AL+ L
  MMETSP1325-20131115|5760_1 13 PIAMLNHLAQGQRwHQPVFTVKRVEGEDHM-PRFKASCQVgpsgAVQTFSpADTASNKKDAKHAAAKVALNSL 84
                67889999999999****************.9********7764223333466669**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.70
# Mc/sec: 523.78
//
Query:       MMETSP1325-20131115|5738_1  [L=533]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.6e-175  583.7  19.6   3.1e-175  583.4  13.6    1.1  1  PF00183.13 Hsp90 protein
    1.6e-12   47.1   0.5    5.3e-12   45.4   0.3    1.9  1  PF13589.1  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
    4.7e-12   45.5   0.1    8.4e-12   44.6   0.0    1.4  1  PF02518.21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
  ------ inclusion threshold ------
      0.078   12.6   0.5        0.2   11.3   0.1    1.9  2  PF10158.4  Tumour suppressor protein


Domain annotation for each model (and alignments):
>> PF00183.13  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  583.4  13.6  9.2e-179  3.1e-175       1     350 [.     189     532 ..     189     533 .] 0.96

  Alignments for each domain:
  == domain 1    score: 583.4 bits;  conditional E-value: 9.2e-179
                 GGGSHHHHHHHHHHHHTT-SS-EEEEEEE---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXEXXXXXXXEEEEEEESXXSXGGGSXGGGSXHHHHHHHHHCCCTTTSXXSEEEEEEEXXXXXEEEEEEEXSSXXSTTTX..XXXXXXXSXEEETTEEEESSXTTSSXGGGTTXEXEEEESSSXSSSXCCCCCTXHHHHHHHHHHHHHHHHHHHCCHTCHHHHHCHHHHHHHCCCXXXXSXCCCHHHHHTTXEEEETTEEEEEEEHHHHHHCSXTTXXEEEEEXXXXHHHHCCSCCHHHHHHTTXXEEEXXSCCHHHHHHCHSBXXXXEEEETTBX.XXX CS
  PF00183.13   1 eyleekklkelvkkhsefisypiklvvekevekevpdeeeeeekeekeeeeekeeeekkeeeeeeeeeeeekkkktkkvkettteeellnktkpiWtrnpkdvteeeyaafyksltndwedplavkhfsveGqlefkallfvPkraPfdlfe..skkkknniklyvrrvfitddaedliPeylsfvkGvvdsedlPlnvsretlqqnkilkvirkklvkkalelikeiaedkedykkfyeefskniklGihedaanrkklakllrfestksedelvslkdyvtrmkeeqkkiyyitGeskkqvekspflerlkkknyevlyltdpvdeyaiqqlkefegkklvnvtkeGlel 350
                 eylee++lk+lvkkhsefi++pikl+vek++ekev+d+e+eee+ee e+       ++k+e++ +ee+ +ek+kktkk+ke++++++ ln +kpiW+r+++dvt eey afyksl+ndwed+ avkhfsveGqlef+++lf+P+raPfd+fe  +kkk+n iklyvrrvfi+d++edl+Pe+lsfvkGvvdsedlPln+sretlqqnkil+vi+k+l+kk++el++e+aed e+ykkfye+fskn+klGihed++nr+k+akllr++stks+++++sl+dyv+rm +eq  i+y+tGes+++ve+spfle+lkkk+yevl+++dp+deya+qqlke+egkkl + tkeG++l
  MMETSP1325-20131115|5738_1 189 EYLEERRLKDLVKKHSEFIGFPIKLYVEKTEEKEVTDDEAEEEDEEGED-------GPKIEDV-TEEDGKEKAKKTKKIKEVSHDWDHLNGQKPIWMRKSDDVTAEEYGAFYKSLSNDWEDHAAVKHFSVEGQLEFRSVLFIPRRAPFDMFEggNKKKHNAIKLYVRRVFIMDNCEDLMPEWLSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLIKKSIELFNELAEDDEKYKKFYEAFSKNLKLGIHEDSTNRAKIAKLLRYHSTKSGEDMTSLDDYVSRMTDEQAGIFYVTGESRRAVENSPFLEKLKKKGYEVLFMVDPIDEYAVQQLKEYEGKKLISATKEGMDL 532
                 8**************************************8875555543.......4677666.4557889********************************************************************************9445699999*********************************************************************************************************************************************************************************************98 PP

>> PF13589.1  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.3   1.5e-15   5.3e-12       2     118 ..      29     175 ..      28     193 .. 0.76

  Alignments for each domain:
  == domain 1    score: 45.4 bits;  conditional E-value: 1.5e-15
   PF13589.1   2 sl.edAiaelvdNsldAdatn................vkisidedkkekseisieDnGkGmskeelvnal.klgrsskdeekeekt.......lGrkGiGmklAslklgrkvtviskkegeks.tlt......ldvekiekeekwdlke 118
                 s+ e  + el+ Ns dA  +                  +i++  +  + ++++ieD G Gm+k++l+n+l ++++s +++  e+ t       +G++G+G  ++++ ++++v+v+sk++++++ t++      ++v++ ++++k d+ +
  MMETSP1325-20131115|5738_1  29 SNkEIFLRELISNSSDALDKIryqsltdpsvleaepsMEIHLIPN-AAANTLTIEDTGIGMTKADLINNLgTIAKSGTKAFMEALTagadismIGQFGVG-FYSAYLVADQVQVTSKNNDDEQhTWKssaggsFTVTADDENNKMDIGR 175
                 66677899********97666678899999999999999999997.5789******************6536777766655443335566666*******.9999*************9988855666677666666555555555544 PP

>> PF02518.21  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   2.5e-15   8.4e-12       3     110 ..      32     185 ..      30     186 .. 0.92

  Alignments for each domain:
  == domain 1    score: 44.6 bits;  conditional E-value: 2.5e-15
                 HHHHHHHHHHHHHHHHHHHHHH..........SEEEEEEEEECTCEEEEEEE-----TH...........HHHHHHCSTTTCCSCSSGGGTT----THHHHHHCCEEEEEEEEECTC.........................T-CEEEEEEEEC CS
  PF02518.21   3 edrlrqivselvdNavkatees..........geievrvkreegelvieVeDnGiGipe...........edlervfepffqtdddsrkvggtGlGlsivkklvellggeieveske.........................ggGttvtlrlpl 110
                 e +lr+++s+  d   k  ++s          +++e+++ ++   +++++eD+GiG+++           +   + f++  ++++d +++g++G+G++++ +++++++++ + ++ e                         g+Gt+++l+l+ 
  MMETSP1325-20131115|5738_1  32 EIFLRELISNSSDALDKIRYQSltdpsvleaePSMEIHLIPNAAANTLTIEDTGIGMTKadlinnlgtiaKSGTKAFMEALTAGADISMIGQFGVGFYSAYLVADQVQVTSKNNDDEqhtwkssaggsftvtaddennkmdiGRGTRIELTLKE 185
                 6789999999999999999999***************************************************************************************95555555999999999*********************9999975 PP

>> PF10158.4  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.6   5.6e+03      50      65 ..     251     266 ..     247     271 .. 0.75
   2 ?   11.3   0.1   5.8e-05       0.2      47      89 ..     382     425 ..     372     440 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 1.6
   PF10158.4  50 dqnklvkrikevdaki 65 
                 +++k +k+ikev+++ 
  MMETSP1325-20131115|5738_1 251 EKAKKTKKIKEVSHDW 266
                 6677788999998765 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 5.8e-05
   PF10158.4  47 vaadqnklvkrike.vdakietllaelrekqkryasyaeqlskv 89 
                  + +qnk+ + ik+ + +k ++l++el e  ++y+++ e++sk 
  MMETSP1325-20131115|5738_1 382 ETLQQNKILRVIKKnLIKKSIELFNELAEDDEKYKKFYEAFSKN 425
                 5678*****9997537788889*******************994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1251  (0.0915009); expected 273.4 (0.02)
Passed bias filter:                      502  (0.0367174); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.99u 0.42s 00:00:01.41 Elapsed: 00:00:00.92
# Mc/sec: 1388.32
//
Query:       MMETSP1325-20131115|5762_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-16   57.7   7.0    8.1e-16   57.5   4.9    1.0  1  PF12777.2  Microtubule-binding stalk of dynein motor
     0.0041   16.4   1.8     0.0048   16.2   1.2    1.0  1  PF10036.4  Putative carnitine deficiency-associated protein
     0.0065   15.8   4.4     0.0079   15.5   3.0    1.1  1  PF10123.4  Mu-like prophage I protein
     0.0075   15.0   0.6      0.009   14.8   0.4    1.2  1  PF10475.4  Protein of unknown function N-terminal domain (DUF2450)
  ------ inclusion threshold ------
       0.01   15.4   6.2      0.012   15.2   3.9    1.4  1  PF07926.7  TPR/MLP1/MLP2-like protein
      0.031   13.5   0.4        2.9    7.2   0.0    2.3  2  PF03118.10 Bacterial RNA polymerase, alpha chain C terminal domain
      0.065   13.1   0.7       0.15   12.0   0.3    1.7  1  PF12320.3  Type 5 capsule protein repressor C-terminal domain
      0.074   12.1   0.3      0.089   11.8   0.2    1.1  1  PF04582.7  Reovirus sigma C capsid protein
      0.078   12.6   7.2       0.11   12.2   5.0    1.3  1  PF01441.14 Lipoprotein
       0.13   10.9   3.3       0.16   10.7   2.3    1.0  1  PF04111.7  Autophagy protein Apg6
        0.2   10.5   4.9       0.26   10.2   3.4    1.2  1  PF08202.6  Mis12-Mtw1 protein family
       0.31   10.7   3.4        1.5    8.6   0.2    2.3  2  PF06103.6  Bacterial protein of unknown function (DUF948)


Domain annotation for each model (and alignments):
>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   4.9   7.1e-19   8.1e-16       2     131 ..      25     154 ..      24     158 .] 0.96

  Alignments for each domain:
  == domain 1    score: 57.5 bits;  conditional E-value: 7.1e-19
   PF12777.2   2 rlengllklqstaaqvddlkaklaaqevelkqknedadkliqvvgvetekvskekaiadeeekkvavinkevkkkqkdceedlakaepallaaqealntlnknnltelksfgsppsavvnvaaavmvlla 131
                 r +ngl+k+  t +qvd+++  l+  + +l    +++d l+  +  +t+     kai  ++e+  +   +e +  + +ce dla a pal  a +aln+l k+++ e+k +  pp av  v  ++ ++++
  MMETSP1325-20131115|5762_1  25 RYDNGLTKIFETQSQVDEMQKYLTDLQPKLDVATKETDALLVRIDKDTKEANASKAIVTKDEVECQKQADEANAIKESCEADLAEAIPALEGAVKALNSLSKADIFEVKMMKKPPGAVKLVMETICIMMS 154
                 899*********************************************************************************************************************9999888876 PP

>> PF10036.4  Putative carnitine deficiency-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.2   4.2e-06    0.0048      33     152 ..      16     132 ..       6     155 .. 0.73

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 4.2e-06
   PF10036.4  33 EdqkirlykiedreklrnvksadweealekYlkdleiPidlkerqevldwLlslAvrleykdnayddlskaekleeeekketklekkstnpldnldfnsaefeegvrklAkklgieahpd 152
                  d++ + +++ d++  +  +++   ++++kYl+dl++ +d++++++  d Ll +  +++ + na +++   ++  e++k++ ++++ +++ + +l+ + +++e +v++l+++++ ++ + 
  MMETSP1325-20131115|5762_1  16 RDEVLESKNRYDNGLTKIFETQSQVDEMQKYLTDLQPKLDVATKET--DALLVRIDKDTKEANA-SKAIVTKDEVECQKQADEANAIKESCEADLAEAIPALEGAVKALNSLSKADIFEV 132
                 577888888888887777777778999*********9988887775..6777665555555555.666666777777777777777777789********************99998553 PP

>> PF10123.4  Mu-like prophage I protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   3.0     7e-06    0.0079     142     219 ..      36     113 ..      21     131 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 7e-06
   PF10123.4 142 sqqeeeeenellekllkaLglaaaateeaalaalaeaalaalaalataaakldeqkeqlaaltakkan.evdlakyvpv 219
                 +q++ +e++++l  l+ +L++a ++t+  +l  + +++++a a  a + + + e+++q + ++a k++ e dla+ +p+
  MMETSP1325-20131115|5762_1  36 TQSQVDEMQKYLTDLQPKLDVATKETDA-LLVRIDKDTKEANASKAIVTKDEVECQKQADEANAIKEScEADLAEAIPA 113
                 5778899*******************98.899*********99999999999***********9665558999999986 PP

>> PF10475.4  Protein of unknown function N-terminal domain (DUF2450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.4   7.9e-06     0.009      50     113 ..      14      75 ..       4     129 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 7.9e-06
   PF10475.4  50 klsqlimekreefvkgmeeieeiekeLkeaavickngRraLdsakkeltrtaLevlakskkkql 113
                 k  ++++e+++ +++g+ +i e++ ++ e  + +++ + +Ld a+ke t  aL v   + +k++
  MMETSP1325-20131115|5762_1  14 KQRDEVLESKNRYDNGLTKIFETQSQVDEMQKYLTDLQPKLDVATKE-TD-ALLVRIDKDTKEA 75 
                 55689******************************************.55.5555555544443 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   3.9   1.1e-05     0.012      31     118 ..      10      97 ..       3      99 .. 0.95

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.1e-05
   PF07926.7  31 dDlenqaeiareaqdkYerelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevelselekkieeln 118
                   l++q++ + e +++Y++ l+k  et  ++ +++k l +lq +++  +ke+d+    +++  ++ +  k+   ++  e++k+ +e n
  MMETSP1325-20131115|5762_1  10 GLLNKQRDEVLESKNRYDNGLTKIFETQSQVDEMQKYLTDLQPKLDVATKETDALLVRIDKDTKEANASKAIVTKDEVECQKQADEAN 97 
                 55899********************************************************************************977 PP

>> PF03118.10  Bacterial RNA polymerase, alpha chain C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.023        26      33      53 ..       5      25 ..       3      38 .. 0.83
   2 ?    7.2   0.0    0.0026       2.9       8      36 ..     104     132 ..      97     135 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.023
  PF03118.10 33 iktvgdLlklseeeLlkikNf 53
                i+t + Ll+++++e l+ kN 
  MMETSP1325-20131115|5762_1  5 INTFKGLLNKQRDEVLESKNR 25
                99*****************95 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0026
  PF03118.10   8 kkllsisIeeLeLsvRsyNCLkragiktv 36 
                 ++ l  +I  Le  v+++N+L +a+i  v
  MMETSP1325-20131115|5762_1 104 EADLAEAIPALEGAVKALNSLSKADIFEV 132
                 5678889999999*************876 PP

>> PF12320.3  Type 5 capsule protein repressor C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   0.00013      0.15      36      79 ..      42      87 ..      39     106 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00013
   PF12320.3 36 tdedylpdlqqrlqellegknvevlrirrerkrteksle..eeene 79
                + ++yl+dlq +l+ ++++  + ++ri+ + k++++s++  ++++ 
  MMETSP1325-20131115|5762_1 42 EMQKYLTDLQPKLDVATKETDALLVRIDKDTKEANASKAivTKDEV 87
                5689*******************************99985444444 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   7.8e-05     0.089      66     179 ..      34     148 ..       9     155 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 7.8e-05
   PF04582.7  66 qdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevdanstdisnlksdvsan.glnitdleervkslesgsstglsfsdPlsladGvvsldldP 179
                  ++ s +d+++  l++l+ ++    +  d+l   + + ++ ++a +a +++ + e + ++ +   +k +  a  + +i  le  vk+l+s s  ++  ++ ++   G v l+++ 
  MMETSP1325-20131115|5762_1  34 FETQSQVDEMQKYLTDLQPKLDVATKETDALLVRIDKDTKEANASKAIVTKDEVECQKQADEANAIKESCEADlAEAIPALEGAVKALNSLSKADIFEVKMMKKPPGAVKLVMET 148
                 456677888888888888888888888888888888888888888888888888888888888888988877536789***************9999999999999999999975 PP

>> PF01441.14  Lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   5.0   9.5e-05      0.11      91     182 ..      41     123 ..      12     127 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 9.5e-05
                 HT-----TT.T---HHHHHHHHHHHHHHHHHTTTT---T.--HHHHHHHH-TT---------HHHHHHHHHHHHHHHHHHHHHHHHHHT--X CS
  PF01441.14  91 kkkeegiseeLkekvekakkkseaflkklkskhaelgkadatddnakkailktnatkkdkGakeLekLntavdeLlkAakeaveaaikeLts 182
                 ++ + +  ++L+ k++ a+k+++a+l ++ ++        ++++na kai  +++ + +k a+e ++++++ ++ l  a  a+e a+k+L s
  MMETSP1325-20131115|5762_1  41 DEMQ-KYLTDLQPKLDVATKETDALLVRIDKD--------TKEANASKAIVTKDEVECQKQADEANAIKESCEADLAEAIPALEGAVKALNS 123
                 2222.123345555555555555555554443........78899*******99999*****************999999*********986 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.3   0.00014      0.16      49     160 ..      14     132 ..       4     140 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00014
                 XXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  49 kqylekLesqnkeee...nvealdseldeLkkeeerlleeleelekeedkl....deeleelqeekekleeeeeqylrelnkfklkklelekelkslelqleyskrqLdkLrkinvFna 160
                 kq +e Les+n+  +   ++ + +s +de++k    l  +l+   ke+d l    d++ +e ++ k  + ++e + +++  + +  k + e +l  +   le + + L+ L k ++F+ 
  MMETSP1325-20131115|5762_1  14 KQRDEVLESKNRYDNgltKIFETQSQVDEMQKYLTDLQPKLDVATKETDALlvriDKDTKEANASKAIVTKDEVECQKQADEANAIKESCEADLAEAIPALEGAVKALNSLSKADIFEV 132
                 56788899998887666677788999999999999999999999999997633336667777778888999999999999999999999999999999999999999999999999975 PP

>> PF08202.6  Mis12-Mtw1 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.4   0.00022      0.26     160     254 ..      34     127 ..      13     137 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00022
   PF08202.6 160 ieneenlailkekikalk..nE..ikeWaklladskdpdkeiqkekklvdse.akidsdtqepdtaqrilsdnanveskletkvDeLqdsvhkLdsaska 254
                 +e + ++++++++++ l+   +   ke ++ll +  +  ke++++k  v +  ++ +++ +e ++       +++ e++l + + +L+++v+ L+s ska
  MMETSP1325-20131115|5762_1  34 FETQSQVDEMQKYLTDLQpkLDvaTKETDALLVRIDKDTKEANASKAIVTKDeVECQKQADEANAI------KESCEADLAEAIPALEGAVKALNSLSKA 127
                 566677777777777664212311455666666666667777777776666666666666666666......9***********************9886 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.2    0.0013       1.5      23      55 ..      35      67 ..      29      70 .. 0.88
   2 ?    4.7   0.2     0.021        24      20      82 ..      64     126 ..      63     128 .. 0.92

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0013
   PF06103.6 23 klkktldevnktvkkltkqvdgitketeellak 55
                ++++ +de++k +++l+ ++d+ tket+ ll +
  MMETSP1325-20131115|5762_1 35 ETQSQVDEMQKYLTDLQPKLDVATKETDALLVR 67
                56888************************9975 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.021
   PF06103.6  20 tlkklkktldevnktvkkltkqvdgitketeellaktnelleDvneKvetldpvfqavadlge 82 
                 +l +++k  +e+n++ + +tk+  +  k+++e  a  ++   D+ e + +l+  ++a + l++
  MMETSP1325-20131115|5762_1  64 LLVRIDKDTKEANASKAIVTKDEVECQKQADEANAIKESCEADLAEAIPALEGAVKALNSLSK 126
                 578999999*******************************************99999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1167  (0.0853569); expected 273.4 (0.02)
Passed bias filter:                      670  (0.0490053); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.54u 0.43s 00:00:00.97 Elapsed: 00:00:00.64
# Mc/sec: 591.60
//
Query:       MMETSP1325-20131115|5767_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   13.4   0.0      0.053   13.1   0.0    1.1  1  PF07825.6 Excisionase-like protein


Domain annotation for each model (and alignments):
>> PF07825.6  Excisionase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.9e-06     0.053      43      75 ..      16      48 ..      14      50 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.9e-06
                EEETT-EE--SS-....-XXXXXXXXXXXXXXX CS
   PF07825.6 43 lveedavkvelerlprvPvtsgllkriasakka 75
                lv+++++  ++  lprv v  + lkr+ +++++
  MMETSP1325-20131115|5767_1 16 LVNASSCLFQIPTLPRVDVQNPTLKRLGASQHG 48
                799***********************9988877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.61
# Mc/sec: 235.71
//
Query:       MMETSP1325-20131115|5766_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00067   19.8   0.0    0.00077   19.6   0.0    1.2  1  PF10718.4 Hypothetical chloroplast protein Ycf34


Domain annotation for each model (and alignments):
>> PF10718.4  Hypothetical chloroplast protein Ycf34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   5.7e-08   0.00077      39      76 ..      34      70 ..      15      71 .. 0.84

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 5.7e-08
   PF10718.4 39 PvihvnirdlkeeeveieWDvrsCesfveeagkWsrlr 76
                P  + +i++   ++v +e+Dv+ Ce f+ ++g W r+ 
  MMETSP1325-20131115|5766_1 34 PGYNGEIIT-VAGQVTTEYDVVRCEDFELDRGCWVRNM 70
                566666776.78899*******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.43s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|5768_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|5769_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.65    8.0  11.2        0.7    7.9   7.8    1.1  1  PF09770.4  Topoisomerase II-associated protein PAT1
       0.65    8.9  10.7       0.48    9.4   6.3    1.5  1  PF04582.7  Reovirus sigma C capsid protein
        3.5    6.3  23.5      0.052   12.3   7.6    2.8  3  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        8.8    3.3  31.0         11    3.0  21.5    1.3  1  PF12128.3  Protein of unknown function (DUF3584)


Domain annotation for each model (and alignments):
>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   7.8   0.00021       0.7      69     201 ..       7     146 ..       2     233 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00021
   PF09770.4  69 aklsrgieeeqvrqkpaaasvspaselsqktst.qspkqsggekstdpesipdlqldeslwgtakkpe........qqpaqapesqpqaaakakkllsleeveaqlqqrqqaqqlpqppaqvlpqqspprqaalpqqakpel 201
                 +kl+++ +e q   ++aaa++s a++l+++ ++ +s +++ ++++t++e++ +++lde   + a++ e         ++a+ + +q++aaa + k+ +le v a+l++ +q +  ++++  +++++ ++ +a l+     + 
  MMETSP1325-20131115|5769_1   7 SKLAAAEDEKQT--AVAAAEASAAEKLAAAEEKvASAESDVEQAKTAAEEERKAALDEAEKEKAEALEaaaadkdaAAAAAREDAQAAAAAMTAKEAELETVSAELEALKQDKSAEDAKLASVEEELAKVKAGLQGELDVAA 146
                 566666666664..888888888888888887777777777777888887777777777666655555777777656666667777888888899***********999999999999999999998888877773333332 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   6.3   0.00014      0.48      35     160 ..      15     142 ..       7     150 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00014
   PF04582.7  35 erltaleaataslsesvssissklsdlsadlqdvtss.lddvkaelkelste.vaalqssvdslsseladlselvsahdaalsslqtevdanstdisnlksdvsanglnitdleervkslesgsstgl 160
                 e+ ta+ aa as  e ++++ +k++  ++d+++  ++  ++ ka l+e ++e  +al+ + +   +  a   e ++a +aa++  + e ++ s+++  lk d sa+  +++++ee + ++++g   +l
  MMETSP1325-20131115|5769_1  15 EKQTAVAAAEASAAEKLAAAEEKVASAESDVEQAKTAaEEERKAALDEAEKEkAEALEAAAADKDAAAAAAREDAQAAAAAMTAKEAELETVSAELEALKQDKSAEDAKLASVEEELAKVKAGLQGEL 142
                 6778999***********************9877655056789****99876267999999999999999999999***************************************9999988866665 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   1.3     0.082   2.8e+02     102     148 ..       4      51 ..       2      58 .. 0.74
   2 ?   12.3   7.6   1.5e-05     0.052      33     162 ..      57     190 ..      44     212 .. 0.85
   3 ?    1.2   0.3     0.037   1.3e+02      84     105 ..     215     236 ..     207     249 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.082
   PF10186.4 102 qrrsdle.asaqlekrraeqlaklqeeikrtksklnslesltaekRsq 148
                 ++ s+l+ a +++++  a+  a+  e++  +++k++s es+++++++ 
  MMETSP1325-20131115|5769_1   4 ELESKLAaAEDEKQTAVAAAEASAAEKLAAAEEKVASAESDVEQAKTA 51 
                 567778878888888888888888888888888888888888877765 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 1.5e-05
   PF10186.4  33 kaeketlkkkveealeeaene.......kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklnslesltaekRsqlcrelaklfplrrv 162
                 ka+ ++ +k+  eale a ++       ++++aq+ +++ ++k++++e +++ +e+lk++ +++ +++++ +e+la+ +  l+   ++ +  a+ l++++++  + +++l++l+   +++ + ++ e+ k+  + ++
  MMETSP1325-20131115|5769_1  57 KAALDEAEKEKAEALEAAAADkdaaaaaAREDAQAAAAAMTAKEAELETVSAELEALKQDKSAEDAKLASVEEELAKVKAGLQ---GELDVAANTLRGQLASAAQVQADLHALHAAELAAVEAKLAEAEKINAIHKE 190
                 445556666666666655554999********************************************************999...9999999**********************9999999999999999999554 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.037
   PF10186.4  84 eeieqkrerieelkealaqrrs 105
                 +ei++ +  ie+ k+++a++r+
  MMETSP1325-20131115|5769_1 215 SEIKEHKGTIEQHKREIATLRE 236
                 5677777777777777777775 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0  21.5    0.0033        11     604     758 ..      19     177 ..       3     245 .. 0.68

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.0033
   PF12128.3 604 eLrerlqaleealqsaeakqkqaeeqlkqlnaeleeakravaeakqalkqarlelqrl.kneqqslkdklekalaerkqqaeeqlqkldaelkqleekkkaaleelkddlree...rlekkakwqevegeldeqlaqlkaaieaartqakarlkelkkq 758
                 ++ ++ + + e+l++ae+k ++ae+ ++q++ ++ee+++a+ + +++ k + le   + k++  +++++  +a a++  ++e++l+++ ael++l+++k a  ++l++  +e+   +   + ++ +   +l  qla++ +  +  ++ ++a+l++++ +
  MMETSP1325-20131115|5769_1  19 AVAAAEASAAEKLAAAEEKVASAESDVEQAKTAAEEERKAALDEAEKEKAEALEAAAAdKDAAAAAAREDAQAAAAAMTAKEAELETVSAELEALKQDKSAEDAKLASVEEELakvKAGLQGELDVAANTLRGQLASAAQVQADLHALHAAELAAVEAK 177
                 556666677788888888888888888888888877666655555555555444444414555566666677777778888888888888888888877665555554433330003333444455555666666666666666666666776666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2144  (0.156817); expected 273.4 (0.02)
Passed bias filter:                      544  (0.0397894); expected 273.4 (0.02)
Passed Vit filter:                       125  (0.00914277); expected 13.7 (0.001)
Passed Fwd filter:                        48  (0.00351083); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.58u 0.39s 00:00:01.97 Elapsed: 00:00:00.75
# Mc/sec: 923.40
//
Query:       MMETSP1325-20131115|5771_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 369.44
//
Query:       MMETSP1325-20131115|5773_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-09   37.2   0.0    3.8e-09   36.4   0.0    1.4  1  PF00651.26 BTB/POZ domain


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   2.8e-13   3.8e-09       3      55 ..     167     218 ..     165     221 .] 0.82

  Alignments for each domain:
  == domain 1    score: 36.4 bits;  conditional E-value: 2.8e-13
                 HHHHTT-S--EEEEETTTEEEEE-HHHHHHH-HHHHHHTTTTTTTT-SEE.EEE CS
  PF00651.26   3 elreqgelcDvtlvvgdgkefkahkavLaarSpyFkalftggeieestvs.eie 55 
                 +l++ g+ +Dv++ ++ g  ++ah+++Laa S++++al+t+g ++es+ + +i 
  MMETSP1325-20131115|5773_1 167 SLLDDGSCSDVVFCAE-GVDIPAHRCILAAQSSVMRALLTNG-MSESKGNsKIM 218
                 6889999*********.8************************.55544322554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1080.81
//
Query:       MMETSP1325-20131115|5770_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-84  283.9   0.0    2.6e-84  282.5   0.0    1.6  1  PF02219.12 Methylenetetrahydrofolate reductase
      2e-36  125.2   0.0    3.1e-36  124.6   0.0    1.3  1  PF05221.12 S-adenosyl-L-homocysteine hydrolase


Domain annotation for each model (and alignments):
>> PF02219.12  Methylenetetrahydrofolate reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.5   0.0   3.9e-88   2.6e-84      41     286 ..       2     283 ..       1     284 [. 0.99

  Alignments for each domain:
  == domain 1    score: 282.5 bits;  conditional E-value: 3.9e-88
  PF02219.12  41 plfvdvTwgaggstaeltssiakviqqelgleailhlTctdaskeeldkalekakelGirnilALrGDppkdedkleekeeefkyaldLvrlireeygdlfdigvaaYPevhp....................................eaksleadlkylkeKvdaGAdfiitQlffdvdkflkfvdqvreagidipiipgimpiksykslkrlaklskvkiPqelldrleeikdddeavkkigielavemvkkllaegvkglHlytlnkekaileileql 286
                 p++vdvTwgagg+tae t++i+ +++ ++gl   +hlTct+ + e++++ale++k  Gi ni+ALrGD p +++k+e++e++f++a+dLv++ir+ ygd+f ++va+YPe+hp                                    +++++  ++ ylkeKvdaGAdfiitQ+ffdv+ ++ f+ ++ +agi++p++pgim +++y  +k++  ++k+++P +l++++ee+kdd +avk++g e+  em k+l+a g +glH y ln+e  ++ il++l
  MMETSP1325-20131115|5770_1   2 PMYVDVTWGAGGTTAEATMDITVAAKRDFGLIPNMHLTCTNIESEKVKEALETCKREGITNIVALRGDAPAGQEKWEATEGGFECAKDLVKFIRDTYGDHFGVSVAGYPEGHPdkikpvtggydslsetekrrcsvqvaedgtetlsvcSDADFAVEMAYLKEKVDAGADFIITQMFFDVQVYTDFCAACVAAGINVPVVPGIMCLNAYGGFKKMGLMCKTRVPPKLTAKMEELKDDKDAVKAYGSEFGAEMSKELMAAGAPGLHYYCLNLEIVVMGILDRL 283
                 99**************************************************************************************************************************************************999********************************************************************************************************************************987 PP

>> PF05221.12  S-adenosyl-L-homocysteine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.6   0.0   4.5e-40   3.1e-36       2      83 ..     300     381 ..     299     382 .] 0.98

  Alignments for each domain:
  == domain 1    score: 124.6 bits;  conditional E-value: 4.5e-40
                 --B-S-GGGTT---HHHHHHGGG----HHHHHH-----TTTT-EEE-----SHHHHHHHHHHHH---EEEEE-SSTTT--HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05221.12   2 eykvkdislaefGrkelelaekemPGlmalreeygdskPlkgakiaGclhmtvqtavlietlkalGaevrwascnifstqda 83 
                 e++v+d++la+fGrke++ ae emPGlma r+eyg+ +P+ +++i+G+lhmt+qtavlietl+ lG ++rw+scnifstqd+
  MMETSP1325-20131115|5770_1 300 EHRVADLTLADFGRKEISQAEAEMPGLMAPRAEYGPIQPMANCRISGSLHMTIQTAVLIETLQYLGGDMRWCSCNIFSTQDH 381
                 689******************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.40s 00:00:01.12 Elapsed: 00:00:00.53
# Mc/sec: 1727.19
//
Query:       MMETSP1325-20131115|5775_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        81  (0.00592452); expected 273.4 (0.02)
Passed bias filter:                       78  (0.00570509); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 258.81
//
Query:       MMETSP1325-20131115|5776_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   14.7   0.1      0.067   12.7   0.0    1.9  2  PF13833.1 EF-hand domain pair
      0.056   13.2   0.0       0.42   10.5   0.0    2.1  2  PF13405.1 EF-hand domain
      0.067   13.2   0.0       0.11   12.5   0.0    1.3  1  PF13499.1 EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1      0.01        47      30      46 ..      36      52 ..      31      57 .. 0.80
   2 ?   12.7   0.0   1.5e-05     0.067       3      44 ..      46      86 ..      44      87 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.01
   PF13833.1 30 lfrefDtdgdGkisfeE 46
                l ++ D d++G+++ ++
  MMETSP1325-20131115|5776_1 36 LCDLSDSDRSGRLKPDD 52
                66889******998665 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 1.5e-05
   PF13833.1  3 GlItreeLkral.allglkglseeevdilfrefDtdgdGkisf 44
                G + +++L++   a +gl  ls  +v + + ++D+ gdG++ f
  MMETSP1325-20131115|5776_1 46 GRLKPDDLRKTFgA-VGLA-LSGADVAVAVEALDAVGDGRVPF 86
                88899*****9955.5999.*******************9955 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   9.3e-05      0.42       2      27 ..      33      58 ..      32      66 .. 0.85
   2 ?    0.1   0.0       0.2   9.1e+02       8      18 ..      75      85 ..      71      89 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 9.3e-05
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                l+++ +l D d++G++  ++Lr+ + 
  MMETSP1325-20131115|5776_1 33 LNDLCDLSDSDRSGRLKPDDLRKTFG 58
                77788888**************9876 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.2
                CC-------B- CS
   PF13405.1  8 lfDkdgdGkid 18
                ++D  gdG++ 
  MMETSP1325-20131115|5776_1 75 ALDAVGDGRVP 85
                689999**985 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.3e-05      0.11      10      59 ..      41      86 ..      32      89 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
   PF13499.1 10 DkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsf 59
                D+d++g+l +++L++ + + g  ls  +v       ++ lD  gdG++ f
  MMETSP1325-20131115|5776_1 41 DSDRSGRLKPDDLRKTFGAVGLALSGADVAVA----VEALDAVGDGRVPF 86
                9********************99998888888....88888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 436.14
//
Query:       MMETSP1325-20131115|5777_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 263.13
//
Query:       MMETSP1325-20131115|5778_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.078   12.3   0.5       0.11   11.8   0.4    1.2  1  PF10215.4 Oligosaccaryltransferase


Domain annotation for each model (and alignments):
>> PF10215.4  Oligosaccaryltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   8.3e-06      0.11       7      23 ..      11      27 ..      11      29 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 8.3e-06
                GGHHHHH---HHHHHHH CS
   PF10215.4  7 LnsLAntLGiaafllIV 23
                L + A++LG+ +f+l V
  MMETSP1325-20131115|5778_1 11 LQRAAIFLGALMFMLTV 27
                5667**********977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 214.67
//
Query:       MMETSP1325-20131115|5781_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-08   34.2   0.1    3.1e-08   33.5   0.0    1.4  1  PF08547.7 Complex I intermediate-associated protein 30 (CIA30)


Domain annotation for each model (and alignments):
>> PF08547.7  Complex I intermediate-associated protein 30 (CIA30)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   2.2e-12   3.1e-08       7     120 ..      29     162 ..      23     180 .. 0.76

  Alignments for each domain:
  == domain 1    score: 33.5 bits;  conditional E-value: 2.2e-12
   PF08547.7   7 esldk..wtavnDkvmGGlSksslelskedktavFsGnlsle...nrgGFasvrt....kkrkesldlsey..eglelrvkGdgrtYk.lnlktesk.........qsglsyqadfetk.kgewqtvkipfsdfvp 120
                 +++++  w+ +nD vmGG S+s++++  ed+++vF+G+  +       GF++  t      + +  d+s+    g+ l+++  + +Y+ +++  + +          s   ++a+f +  ++  q+v +pf++f  
  MMETSP1325-20131115|5781_1  29 DDSTNyvWQDMNDPVMGGASTSTFTI--EDGAGVFNGTCAIVeslAAPGFCKAYTyrplGHDASFADASAHieGGILLKLRTTTTSYTgFKVAFSATgipvvpgdhTSYGTFKANFMVAdTSDVQSVYVPFDSFSY 162
                 4444456*******************..569*******9888788999*******999844445555554322578888888777775455555544569999887777788888887746669999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.49
# Mc/sec: 1418.25
//
Query:       MMETSP1325-20131115|5783_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 705.08
//
Query:       MMETSP1325-20131115|5785_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.67
# Mc/sec: 218.18
//
Query:       MMETSP1325-20131115|5784_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-20   73.3   0.1    3.1e-20   72.7   0.0    1.3  1  PF00828.14 Ribosomal protein L18e/L15


Domain annotation for each model (and alignments):
>> PF00828.14  Ribosomal protein L18e/L15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.7   0.0   2.3e-24   3.1e-20       3     129 .]      50     176 ..      49     176 .. 0.84

  Alignments for each domain:
  == domain 1    score: 72.7 bits;  conditional E-value: 2.3e-24
                 CCSHHHHHHH---S-----STT-T......STSSSCHHH-----GGHSGGGGCEEEEHHHHHHCTTTCTTSB-...--TTTCEEEHHHTSSEEEEE------S-.-EEEESEE-HHHHHHHCC----EEEH CS
  PF00828.14   3 dgktrgrgnkggrgraGvhkhkriflgklvklyrrlgkrgfnrpklrksrrnvapvnlgkLdelikklksgkl...eeegktvvvlgevtgyvKvlGsGkltkp.ltVkalkfSkkArekIeaaGGevvll 129
                 +g t+g g++g+++raG+   +++f+g++ +lyrr++k   +      +r  ++p+ l+ L+  ++  +   +     e+k + + ++v   +K++G G+lt + ltV+ ++f+++Are+Ie  GG++v++
  MMETSP1325-20131115|5784_1  50 QGATCGFGMRGQKSRAGR-PARPGFEGGQQPLYRRIPKLRGRPLGPGHKRVIYNPIKLDVLNAAAEGSTV--TiesLLEQKALTKSTKV-PLNKIVGGGELTAKgLTVQMHAFTASAREAIEGNGGSCVVI 176
                 6899*************8.999****************74555455555999*********874433322..24666677777777777.99***********99***********************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 829.85
//
Query:       MMETSP1325-20131115|5787_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.026   14.4   0.0      0.039   13.8   0.0    1.2  1  PF11521.3 C-terminal general transcription factor TFIIE alpha


Domain annotation for each model (and alignments):
>> PF11521.3  C-terminal general transcription factor TFIIE alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   2.9e-06     0.039      49      74 ..       7      29 ..       3      32 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2.9e-06
   PF11521.3 49 pfplsevsqrpeLveqmteqEkeaYi 74
                +f +++v+   eL++qmt +Ek +Y+
  MMETSP1325-20131115|5787_1  7 AFAFQDVD---ELIAQMTLEEKITYL 29
                67777777...************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|5786_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   11.1   9.4       0.21   10.9   6.5    1.1  1  PF10500.4  Nuclear RNA-splicing-associated protein
        1.3    9.0   6.0        2.4    8.1   4.2    1.4  1  PF05501.6  Domain of unknown function (DUF755)


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   6.5   3.1e-05      0.21      44      74 ..      72     107 ..      32     112 .] 0.40

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.1e-05
   PF10500.4  44 e.....srkkrekkkkkrrersssssssssssssss 74 
                 +     +    e ++ + r+r +sssssssssss++
  MMETSP1325-20131115|5786_1  72 RpgdisTSPPIELERLRVRRRGTSSSSSSSSSSSAA 107
                 244443222223333344444433333333333332 PP

>> PF05501.6  Domain of unknown function (DUF755)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.2   0.00035       2.4     104     118 ..      91     105 ..      82     109 .. 0.52

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00035
   PF05501.6 104 ksssSSsssssssss 118
                 ++ +SSsssssssss
  MMETSP1325-20131115|5786_1  91 RRGTSSSSSSSSSSS 105
                 334444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 583.46
//
Query:       MMETSP1325-20131115|5788_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.8    6.0  14.2        1.8    6.0   9.9    1.2  1  PF13779.1  Domain of unknown function (DUF4175)


Domain annotation for each model (and alignments):
>> PF13779.1  Domain of unknown function (DUF4175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   9.9   0.00013       1.8     645     690 ..       7      52 ..       2     107 .. 0.61

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00013
   PF13779.1 645 gqqqgqqgeegqqeeeslaerqqalreeleklkkelkgeggeagea 690
                 +qqq+qq + + q++++++++qq+ +++  +  ++  g+gg +g +
  MMETSP1325-20131115|5788_1   7 QQQQQQQPTPQYQAQQQQQQQQQQYQQAAPQGYGDQGGMGGPPGYE 52 
                 2223333333333333333444444444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1560  (0.114102); expected 273.4 (0.02)
Passed bias filter:                      958  (0.0700702); expected 273.4 (0.02)
Passed Vit filter:                       122  (0.00892335); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.42s 00:00:01.00 Elapsed: 00:00:00.57
# Mc/sec: 462.74
//
Query:       MMETSP1325-20131115|5791_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-13   50.0   0.0    3.6e-13   49.7   0.0    1.1  1  PF00005.22 ABC transporter
    8.1e-06   25.8   0.0    9.5e-06   25.6   0.0    1.0  1  PF13304.1  AAA domain
     0.0068   16.1   0.2      0.062   13.1   0.1    2.1  1  PF13558.1  Putative exonuclease SbcCD, C subunit


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.0     8e-17   3.6e-13      63     118 .]      12      71 ..       3      71 .. 0.92

  Alignments for each domain:
  == domain 1    score: 49.7 bits;  conditional E-value: 8e-17
                 ---HHHHHHHHHH---HHHH--....----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  63 kktdkrieevlekvgldelldk....srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 +++++r+++vl+++gld+  ++    + ++++SgG+k+rv++A +ll  p ll LDEPt+
  MMETSP1325-20131115|5791_1  12 HIKQERVRNVLDELGLDHIQNSvigdEFIRGISGGEKRRVSIASELLAYPALLFLDEPTT 71 
                 45799*************88888**9*********************************6 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   2.1e-09   9.5e-06     201     280 ..       7      83 ..       2      86 .. 0.88

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 2.1e-09
   PF13304.1 201 dlkkvlklsllidedllekdviflkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrlie 280
                 d++  +++ ++++++l+e  + + +++  g+  ++  S G+kr  ++++ ll  +    +l++DEp +gL+ +   ++++
  MMETSP1325-20131115|5791_1   7 DKVPLHIKQERVRNVLDELGLDHIQNSVIGDEFIRGISGGEKRRVSIASELLAYP---ALLFLDEPTTGLDASNAINVVR 83 
                 5566677788888888888************************************...*************998887775 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   1.4e-05     0.062      64      87 ..      61      84 ..      28      87 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.4e-05
   PF13558.1 64 irlvfLDEAFsklDeeniasllel 87
                ++l+fLDE++++lD+ n+ +++++
  MMETSP1325-20131115|5791_1 61 PALLFLDEPTTGLDASNAINVVRI 84
                78**************99887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|5792_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.053   13.7   0.0       0.12   12.5   0.0    1.7  1  PF13437.1 HlyD family secretion protein


Domain annotation for each model (and alignments):
>> PF13437.1  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   8.9e-06      0.12      50      94 ..      69     113 ..      23     116 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 8.9e-06
   PF13437.1  50 ikkkgqkvtlklddgpektlegkvesisptv.dpeegtykveasld 94 
                 +   g++v+l+l+  +++ +eg+ + i + + + e+g ++v++++ 
  MMETSP1325-20131115|5792_1  69 V-AAGMSVRLQLAVSAKAGMEGTFTDIIQIIsEHETGEVEVRVRVR 113
                 4.58********977778***********77366999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.32s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 529.01
//
Query:       MMETSP1325-20131115|5790_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.8    7.3   8.3         17    5.8   3.0    2.5  2  PF07172.6 Glycine rich protein family


Domain annotation for each model (and alignments):
>> PF07172.6  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   3.0    0.0012        17      16      80 ..      22      91 ..      10      97 .. 0.54
   2 ?    2.7   0.0     0.012   1.6e+02      33      56 ..      99     122 ..      93     129 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0012
   PF07172.6 16 vlLissevaaaelskeeksekeeevkdekyggggkh......ggGgygggggggngGGGykgggGgygggg 80
                v+L s +v+ +e+++  + e + + ++e++ ggg        ++ g       g+ GGG  + gG y+  g
  MMETSP1325-20131115|5790_1 22 VVLKSAAVSFHEEQQALRDEMARKQEEEDEAGGGASttqlkeKEKGTDAVLDVGEVGGG-DDSGGLYDDFG 91
                55556666666665555555555444444444444456777633344444444445555.45566666533 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.012
   PF07172.6  33 ksekeeevkdekyggggkhggGgy 56 
                  +e+e+ev ++++ g g+++g + 
  MMETSP1325-20131115|5790_1  99 DEEDEDEVAPTEDVGAGNTEGVAV 122
                 57999**********999865544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      456  (0.0333528); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.63
# Mc/sec: 631.42
//
Query:       MMETSP1325-20131115|5793_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   11.7   0.6        0.1   11.7   0.4    1.7  2  PF08990.6 Erythronolide synthase docking


Domain annotation for each model (and alignments):
>> PF08990.6  Erythronolide synthase docking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.3      0.31   4.3e+03      21      24 ..      10      13 ..       9      13 .. 0.84
   2 ?   11.7   0.4   7.6e-06       0.1      14      25 ..      50      61 ..      49      62 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 0.31
   PF08990.6 21 tRqR 24
                +R+R
  MMETSP1325-20131115|5793_1 10 ARRR 13
                8998 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 7.6e-06
   PF08990.6 14 vTaDLhetRqRL 25
                + +DL+++R+RL
  MMETSP1325-20131115|5793_1 50 AVVDLRDARERL 61
                689********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|5794_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       794  (0.0580749); expected 273.4 (0.02)
Passed bias filter:                      446  (0.0326214); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.57
# Mc/sec: 495.80
//
Query:       MMETSP1325-20131115|5782_1  [L=566]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-38  130.7   0.0    6.7e-38  130.1   0.0    1.3  1  PF01369.15 Sec7 domain


Domain annotation for each model (and alignments):
>> PF01369.15  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.1   0.0   4.9e-42   6.7e-38      35     190 .]      81     372 ..      47     372 .. 0.79

  Alignments for each domain:
  == domain 1    score: 130.1 bits;  conditional E-value: 4.9e-42
                 --HHHHHHHHHHTTTT...S-TTT----TT--SHHHHHHHHHHHHTS------S----HHHHHTS-B---HHHHHHHHHHH---HHHH-T....................................................................................................................................TT.SSSHHHHHHHHHHHHHHHHHHH-TTS-GG..------TTTT----------HHHHHHHHHHHHHS-- CS
  PF01369.15  35 eetpksvakflkespe...ldkkkvgeyLgkndefneevlkeyvelfdfkglsllealRtflssfrlpgEaqqierileaFskrYfeqnpr...................................................................................................................................tavfkssdaifilaysiimLntDlHnpqvknk..mtledFiknnrgindgknlprefLediYesIkaeei 190
                 + +p++va+ l+  +e   +  + +g+ Lg+++ef +++ +e+   fdf++++++ a+R++l +frlpgE++qi+rile F+ +Y++ n++                                                                                                                                   +  f s+d++ +laysiimL t+lHn++v++k  m l  Fi+++++indg n+p ++L  iY +I++ee+
  MMETSP1325-20131115|5782_1  81 PMSPREVARELYAGSEagiVPVDLLGQCLGHHHEFFQALANEFPFFFDFQNMNIVPAIRLYLFRFRLPGESDQIQRILEGFAGAYYAANNNknvekpppgslsstrtdpqtrgwyveptiddngehccvhcgalesevdgdlracagcnivhfcrpcrylahrrghavvgmvgygracvqarrnagtlevdqetgmatmrfdrdgksfaasekvaaeydwprVSPFLSEDSVMVLAYSIIMLTTNLHNQNVRSKdrMDLHAFIQQCHKINDGTNFPGDMLTGIYADIRDEEL 372
                 5667777776643333355777889*************************************************************6554556666666666666666666677777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777888887889*************************986666*********************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.36s 00:00:01.23 Elapsed: 00:00:00.49
# Mc/sec: 2768.04
//
Query:       MMETSP1325-20131115|5799_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 162.95
//
Query:       MMETSP1325-20131115|5798_1  [L=620]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-33  113.0  13.4    3.1e-11   42.6   0.2    6.3  6  PF13414.1  TPR repeat
    1.5e-25   86.9  11.6    0.00046   19.7   0.0    9.1  9  PF07719.12 Tetratricopeptide repeat
    3.5e-24   84.7   7.0    4.4e-05   23.8   0.0    7.3  8  PF13432.1  Tetratricopeptide repeat
    2.9e-21   75.0   3.8    7.5e-09   35.2   0.0    5.8  6  PF13424.1  Tetratricopeptide repeat
    2.4e-20   71.1  12.7    0.00047   19.5   0.0    8.5  9  PF00515.23 Tetratricopeptide repeat
    1.9e-14   52.7  15.4       0.01   16.2   0.0    9.4 10  PF13428.1  Tetratricopeptide repeat
    3.8e-14   51.9   0.9    3.8e-14   51.9   0.7    2.0  2  PF02209.14 Villin headpiece domain
    1.4e-13   49.4   0.1       0.28   10.9   0.0    7.1  7  PF13181.1  Tetratricopeptide repeat
    1.4e-13   50.1   1.8       0.27   11.6   0.0    8.0  7  PF13174.1  Tetratricopeptide repeat
    2.2e-11   42.8   3.2       0.16   12.1   0.0    6.4  6  PF13431.1  Tetratricopeptide repeat
    8.4e-10   38.2  10.2    0.00062   19.4   0.0    5.3  6  PF13371.1  Tetratricopeptide repeat
    6.4e-08   31.7   5.6        4.4    7.2   0.0    7.0  7  PF13176.1  Tetratricopeptide repeat
    1.5e-05   24.6  10.2       0.29   10.9   0.0    5.8  6  PF13374.1  Tetratricopeptide repeat
    0.00014   21.8   2.3       0.41   11.1   0.0    4.7  5  PF07721.9  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.034   13.4   0.0        9.3    5.5   0.0    2.9  2  PF13525.1  Outer membrane lipoprotein
       0.11   12.1   0.6        1.7    8.3   0.0    2.9  3  PF04957.7  Ribosome modulation factor


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.1    0.0066       5.6       8      67 ..      22      82 ..      18      84 .. 0.71
   2 ?    1.6   0.0      0.23     2e+02       6      44 ..     104     142 ..     102     145 .. 0.83
   3 !   42.6   0.2   3.6e-14   3.1e-11       5      69 .]     141     204 ..     138     204 .. 0.95
   4 !   22.6   0.0   6.3e-08   5.4e-05      13      66 ..     217     269 ..     208     272 .. 0.90
   5 !   27.8   0.2   1.5e-09   1.3e-06       8      68 ..     291     358 ..     287     359 .. 0.84
   6 !   16.9   0.0   3.8e-06    0.0033      10      67 ..     369     427 ..     364     432 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0066
   PF13414.1  8 elGnalfkegdydeAieayekAleldpnnae.....lyynlAlaylklgkdyeeAledyekAlel 67
                +++ a+ + ++++eA+++    l+l  + ++     + +  + ++++  ++ e+Al++++  +e 
  MMETSP1325-20131115|5798_1 22 AEAAAAVQCKQFQEALDK---ILQLPDDAPQkldfqAQNIYCVCLWQT-DQLEDALKAFNTLIED 82
                566666677777777654...4555444444555779999*******8.789*******998886 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.23
   PF13414.1   6 lkelGnalfkegdydeAieayekAleldpnnaelyynlA 44 
                 l++++ +l +e++ +e+ + y++    +p ++el +n A
  MMETSP1325-20131115|5798_1 104 LFQKAGKLRQERKIKESSDVYQEIDLDEPATPELRFNVA 142
                 7899999**************995555689999999988 PP

  == domain 3    score: 42.6 bits;  conditional E-value: 3.6e-14
   PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                 ++++ G +l++++d+++A++++e Al+ +p++ e++ nl+l+ ++ +  ye+A+e+++kA++ +P
  MMETSP1325-20131115|5798_1 141 VANNYGIVLMEQKDFAQALQCFELALDVRPECVEAMHNLGLSCIRVN-LYEKAYENFSKAVAARP 204
                 57999****************************************97.************99877 PP

  == domain 4    score: 22.6 bits;  conditional E-value: 6.3e-08
   PF13414.1  13 lfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66 
                 l  + +yde ie++  A++  pn+   ++ ++++y ++g+  eeAl d+e  +e
  MMETSP1325-20131115|5798_1 217 LVAMARYDEVIEQCGIAIQQLPNDHRPLFMRGYSYAQQGR-HEEALPDLEAGME 269
                 566789*********************************6.6******997665 PP

  == domain 5    score: 27.8 bits;  conditional E-value: 1.5e-09
   PF13414.1   8 elGnalfkegdydeAieayekAleldpnnae...lyynlAlaylkl.....gkdyeeAledyekAleld 68 
                  +G+a+++eg++ eA+ +++kA++ dp+na    + +n Al+ l+l     g   ++A+  +++ l+ d
  MMETSP1325-20131115|5798_1 291 KKGEAALEEGRFGEALPLFQKAIDADPKNAAvnvVKFNKALCQLNLddgtnG-LNDAAISTLKEILKAD 358
                 68***************************99999***********9444433.4568888888777765 PP

  == domain 6    score: 16.9 bits;  conditional E-value: 3.8e-06
   PF13414.1  10 GnalfkegdydeAieayekAleld..pnnaelyynlAlaylklgkdyeeAledyekAlel 67 
                 G+ +  + dy  A  a++ Al++d  p++a+++yn + + l++  +++ Al+ ++++l l
  MMETSP1325-20131115|5798_1 369 GQLHCLLEDYITADSAFTTALSIDlePDDADVMYNHGVVILRNE-NRQGALDRFRQVLTL 427
                 77888899999**********98666****************76.789********9987 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.34   2.9e+02       4      23 ..      20      39 ..      17      43 .. 0.80
   2 !    9.4   0.0    0.0011      0.96       8      33 ..      60      85 ..      53      86 .. 0.87
   3 !   19.7   0.0   5.4e-07   0.00046       4      33 ..     142     171 ..     139     172 .. 0.91
   4 !   14.9   0.0   1.9e-05     0.016       2      33 ..     174     205 ..     173     206 .. 0.94
   5 ?   -1.2   0.0       2.7   2.3e+03      11      34 .]     217     240 ..     215     240 .. 0.82
   6 !   16.3   0.0   6.9e-06    0.0059       4      28 ..     244     268 ..     241     273 .. 0.87
   7 !   18.0   0.1     2e-06    0.0017       7      34 .]     292     319 ..     288     319 .. 0.94
   8 ?    3.1   0.0      0.11        96       8      31 ..     369     392 ..     364     394 .. 0.92
   9 ?    1.7   0.0      0.31   2.7e+02       5      31 ..     402     428 ..     398     431 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.34
                HHHHHHHHHHTT-HHHHHHH CS
  PF07719.12  4 lynlGlayyklgdyeeAlea 23
                l + + a+ + ++++eAl+ 
  MMETSP1325-20131115|5798_1 20 LVAEAAAAVQCKQFQEALDK 39
                667889999999*****986 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.0011
                HHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  8 GlayyklgdyeeAleafekAleldPn 33
                  ++++ +++e+Al+af+  +e +P+
  MMETSP1325-20131115|5798_1 60 CVCLWQTDQLEDALKAFNTLIEDFPD 85
                6799*****************98886 PP

  == domain 3    score: 19.7 bits;  conditional E-value: 5.4e-07
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAleldPn 33 
                  +n G ++++++d+++Al++fe Al   P+
  MMETSP1325-20131115|5798_1 142 ANNYGIVLMEQKDFAQALQCFELALDVRPE 171
                 5899*********************99997 PP

  == domain 4    score: 14.9 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                 ea +nlGl++++ + ye+A e f kA++  P+
  MMETSP1325-20131115|5798_1 174 EAMHNLGLSCIRVNLYEKAYENFSKAVAARPD 205
                 899************************99997 PP

  == domain 5    score: -1.2 bits;  conditional E-value: 2.7
                 HHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  11 yyklgdyeeAleafekAleldPnn 34 
                 + ++ +y+e +e +  A++  Pn+
  MMETSP1325-20131115|5798_1 217 LVAMARYDEVIEQCGIAIQQLPND 240
                 556679999999999999999986 PP

  == domain 6    score: 16.3 bits;  conditional E-value: 6.9e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAl 28 
                 l+++G++y+++g++eeAl ++e   
  MMETSP1325-20131115|5798_1 244 LFMRGYSYAQQGRHEEALPDLEAGM 268
                 89****************9998765 PP

  == domain 7    score: 18.0 bits;  conditional E-value: 2e-06
                 HHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   7 lGlayyklgdyeeAleafekAleldPnn 34 
                  G+a+++ g++ eAl +f+kA+  dP+n
  MMETSP1325-20131115|5798_1 292 KGEAALEEGRFGEALPLFQKAIDADPKN 319
                 699***********************97 PP

  == domain 8    score: 3.1 bits;  conditional E-value: 0.11
                 HHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   8 GlayyklgdyeeAleafekAleld 31 
                 G+++  l dy  A  af  Al++d
  MMETSP1325-20131115|5798_1 369 GQLHCLLEDYITADSAFTTALSID 392
                 8999*****************997 PP

  == domain 9    score: 1.7 bits;  conditional E-value: 0.31
                 HHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAleld 31 
                 yn G + +++ + + Al+ f+++l l+
  MMETSP1325-20131115|5798_1 402 YNHGVVILRNENRQGALDRFRQVLTLE 428
                 55577778999*************986 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.1    0.0011      0.97       3      63 ..      23      85 ..      21      87 .. 0.83
   2 ?   -2.1   0.0       7.2   6.1e+03       2      39 ..     106     143 ..     105     145 .. 0.79
   3 !   23.8   0.0   5.2e-08   4.4e-05       4      50 ..     146     192 ..     143     192 .. 0.92
   4 !   13.8   0.0   7.4e-05     0.063      13      63 ..     189     239 ..     184     241 .. 0.90
   5 ?    6.7   0.0     0.012        10       2      22 ..     246     266 ..     244     274 .. 0.72
   6 !   17.3   0.3   5.8e-06    0.0049       2      33 ..     291     322 ..     290     361 .. 0.82
   7 ?   -1.6   0.0       5.2   4.4e+03      14      27 ..     345     358 ..     340     375 .. 0.69
   8 !   12.2   0.0   0.00023       0.2      10      61 ..     375     428 ..     366     434 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0011
   PF13432.1  3 lArallraGdydeAlaaleaalalaPe..aaeallllaeallrlgrldeAaallraalalaPd 63
                +A a+++ ++++eAl+ + ++ ++aP+  + +a+  + ++l++  +l++A+++++ +++  Pd
  MMETSP1325-20131115|5798_1 23 EAAAAVQCKQFQEALDKILQLPDDAPQklDFQAQNIYCVCLWQTDQLEDALKAFNTLIEDFPD 85
                67777777888888877777777776677**********************999999999987 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 7.2
   PF13432.1   2 alArallraGdydeAlaaleaalalaPeaaeallllae 39 
                 ++A  l + ++ +e  ++++++  ++P  +e +++ a 
  MMETSP1325-20131115|5798_1 106 QKAGKLRQERKIKESSDVYQEIDLDEPATPELRFNVAN 143
                 67778888889999999998887778999998888876 PP

  == domain 3    score: 23.8 bits;  conditional E-value: 5.2e-08
   PF13432.1   4 ArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeA 50 
                 +  l++++d+++Al+++e al+  Pe++ea+ +l+ ++ r + +++A
  MMETSP1325-20131115|5798_1 146 GIVLMEQKDFAQALQCFELALDVRPECVEAMHNLGLSCIRVNLYEKA 192
                 56799********************************9999988877 PP

  == domain 4    score: 13.8 bits;  conditional E-value: 7.4e-05
   PF13432.1  13 ydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPd 63 
                 y++A++ +++a+a+ P+   al +  e+l ++ r+de ++    a++  P+
  MMETSP1325-20131115|5798_1 189 YEKAYENFSKAVAARPDLSIALIGKIECLVAMARYDEVIEQCGIAIQQLPN 239
                 99***********************************99887777777666 PP

  == domain 5    score: 6.7 bits;  conditional E-value: 0.012
   PF13432.1   2 alArallraGdydeAlaalea 22 
                 +++ ++ ++G+ +eAl+ lea
  MMETSP1325-20131115|5798_1 246 MRGYSYAQQGRHEEALPDLEA 266
                 567777777777777777665 PP

  == domain 6    score: 17.3 bits;  conditional E-value: 5.8e-06
   PF13432.1   2 alArallraGdydeAlaaleaalalaPeaaea 33 
                 ++++a+l+ G++ eAl+++++a++++P++a +
  MMETSP1325-20131115|5798_1 291 KKGEAALEEGRFGEALPLFQKAIDADPKNAAV 322
                 5799**********************998864 PP

  == domain 7    score: -1.6 bits;  conditional E-value: 5.2
   PF13432.1  14 deAlaaleaalala 27 
                 d+A+  l+++l+++
  MMETSP1325-20131115|5798_1 345 DAAISTLKEILKAD 358
                 78888888888887 PP

  == domain 8    score: 12.2 bits;  conditional E-value: 0.00023
   PF13432.1  10 aGdydeAlaaleaalala..PeaaeallllaeallrlgrldeAaallraalala 61 
                 + dy  A  a+ +al  +  P++a+++++ +++ lr  + ++A+  +r+ l l 
  MMETSP1325-20131115|5798_1 375 LEDYITADSAFTTALSIDlePDDADVMYNHGVVILRNENRQGALDRFRQVLTLE 428
                 56777788899999999999************************9999988544 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       0.6   5.2e+02      13      70 ..      61      77 ..      30      83 .. 0.51
   2 !   35.2   0.0   8.8e-12   7.5e-09       6      77 ..     140     204 ..     135     205 .. 0.94
   3 !   10.4   0.0   0.00051      0.44       2      74 ..     204     269 ..     203     273 .. 0.77
   4 !   16.8   0.0     5e-06    0.0043      12      77 ..     248     317 ..     244     318 .. 0.89
   5 ?   -1.9   0.0       3.4   2.9e+03      60      77 ..     342     359 ..     327     360 .. 0.72
   6 !   15.6   0.0   1.2e-05      0.01      11      75 ..     368     427 ..     359     430 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.6
   PF13424.1 13 lvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleyle 70
                 +l++  ++                                         ++Al+ ++
  MMETSP1325-20131115|5798_1 61 VCLWQTDQL-----------------------------------------EDALKAFN 77
                334444444.........................................55555543 PP

  == domain 2    score: 35.2 bits;  conditional E-value: 8.8e-12
   PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77 
                 ++ nn++ vl++++d+ +Al+++e al+++       p+++ a++nl+  + + + y++A e + kA+++++
  MMETSP1325-20131115|5798_1 140 NVANNYGIVLMEQKDFAQALQCFELALDVR-------PECVEAMHNLGLSCIRVNLYEKAYENFSKAVAARP 204
                 5789***********************998.......9*****************************99875 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 0.00051
   PF13424.1   2 pdlatilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                 pdl ++l    ++l ++ +yde +e +  a++    l++dh    r l+  ++ y+++g+++eAl+ le  +e
  MMETSP1325-20131115|5798_1 204 PDLSIALIGKIECLVAMARYDEVIEQCGIAIQQ---LPNDH----RPLFMRGYSYAQQGRHEEALPDLEAGME 269
                 566666667777888888899999777777754...68887....56899999************98887665 PP

  == domain 4    score: 16.8 bits;  conditional E-value: 5e-06
   PF13424.1  12 alvlrrlgdydeAlelyekalellrelgdd....hpdtaralnnlanlylalgdydeAleylekAleiae 77 
                 + ++ ++g+++eAl  +e  +e ++  + d      ++  +    +++ l+ g++ eAl++++kA+++++
  MMETSP1325-20131115|5798_1 248 GYSYAQQGRHEEALPDLEAGMECFKGSPTDykkfKRWIFHIAAKKGEAALEEGRFGEALPLFQKAIDADP 317
                 66899******************999887656668899999*************************9875 PP

  == domain 5    score: -1.9 bits;  conditional E-value: 3.4
   PF13424.1  60 gdydeAleylekAleiae 77 
                 g +d+A+  l++ l++++
  MMETSP1325-20131115|5798_1 342 GLNDAAISTLKEILKADR 359
                 447888888888888765 PP

  == domain 6    score: 15.6 bits;  conditional E-value: 1.2e-05
   PF13424.1  11 lalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                  +++++ l+dy  A + + +al + l       pd a++++n + + l+ ++ + Al+ ++++l++
  MMETSP1325-20131115|5798_1 368 FGQLHCLLEDYITADSAFTTALSIdL------EPDDADVMYNHGVVILRNENRQGALDRFRQVLTL 427
                 689999******************55......445599*************************987 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       1.5   1.3e+03       9      22 ..      25      38 ..      21      38 .. 0.80
   2 ?    2.3   0.0      0.15   1.3e+02       9      26 ..      61      78 ..      60      81 .. 0.85
   3 !   19.5   0.0   5.5e-07   0.00047       8      34 .]     146     172 ..     143     172 .. 0.93
   4 !   15.4   0.0   1.1e-05     0.009       2      33 ..     174     205 ..     173     206 .. 0.93
   5 ?    2.4   0.0      0.13   1.1e+02       3      34 .]     209     240 ..     207     240 .. 0.85
   6 !   13.8   0.0   3.4e-05     0.029       4      25 ..     244     265 ..     242     269 .. 0.89
   7 !   16.4   0.1   5.1e-06    0.0043       7      34 .]     292     319 ..     290     319 .. 0.95
   8 ?   -2.8   0.0       6.2   5.3e+03       5      15 ..     327     337 ..     326     338 .. 0.73
   9 ?    0.2   0.0       0.7     6e+02       8      31 ..     369     392 ..     369     393 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 1.5
                HHHHHTT-HHHHHH CS
  PF00515.23  9 naylklgkydeAle 22
                +a  + ++++eAl+
  MMETSP1325-20131115|5798_1 25 AAAVQCKQFQEALD 38
                56668899***996 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.15
                HHHHHTT-HHHHHHHHHH CS
  PF00515.23  9 naylklgkydeAleyyek 26
                +++ +  ++++Al++++ 
  MMETSP1325-20131115|5798_1 61 VCLWQTDQLEDALKAFNT 78
                5888999*********85 PP

  == domain 3    score: 19.5 bits;  conditional E-value: 5.5e-07
                 HHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   8 GnaylklgkydeAleyyekALelnPnn 34 
                 G ++++++++ +Al+++e AL ++P++
  MMETSP1325-20131115|5798_1 146 GIVLMEQKDFAQALQCFELALDVRPEC 172
                 899**********************85 PP

  == domain 4    score: 15.4 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALelnPn 33 
                 +a  nlG+ + + + y++A e ++kA+  +P+
  MMETSP1325-20131115|5798_1 174 EAMHNLGLSCIRVNLYEKAYENFSKAVAARPD 205
                 7889***********************99987 PP

  == domain 5    score: 2.4 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekALelnPnn 34 
                 al ++  ++  + +yde +e +  A++  Pn+
  MMETSP1325-20131115|5798_1 209 ALIGKIECLVAMARYDEVIEQCGIAIQQLPND 240
                 5666677888999*************999996 PP

  == domain 6    score: 13.8 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHHHTT-HHHHHHHHH CS
  PF00515.23   4 lynlGnaylklgkydeAleyye 25 
                 l+ +G+ y ++g+++eAl + e
  MMETSP1325-20131115|5798_1 244 LFMRGYSYAQQGRHEEALPDLE 265
                 6789**************9987 PP

  == domain 7    score: 16.4 bits;  conditional E-value: 5.1e-06
                 HHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   7 lGnaylklgkydeAleyyekALelnPnn 34 
                 +G a l+ g++ eAl  ++kA+  +P+n
  MMETSP1325-20131115|5798_1 292 KGEAALEEGRFGEALPLFQKAIDADPKN 319
                 79999*********************98 PP

  == domain 8    score: -2.8 bits;  conditional E-value: 6.2
                 HHHHHHHHHTT CS
  PF00515.23   5 ynlGnaylklg 15 
                 +n+++++l+l 
  MMETSP1325-20131115|5798_1 327 FNKALCQLNLD 337
                 68888888775 PP

  == domain 9    score: 0.2 bits;  conditional E-value: 0.7
                 HHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   8 GnaylklgkydeAleyyekALeln 31 
                 G+++  l++y  A  ++  AL+++
  MMETSP1325-20131115|5798_1 369 GQLHCLLEDYITADSAFTTALSID 392
                 78899999*************997 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.2       1.2     1e+03       8      33 ..      24      49 ..      18      56 .. 0.73
   2 !   10.2   0.0     0.001      0.89       5      33 ..      57      85 ..      53      92 .. 0.84
   3 !   14.3   0.0   5.1e-05     0.043       5      42 ..     143     180 ..     139     182 .. 0.91
   4 ?    3.1   0.0       0.2   1.7e+02       5      38 ..     177     210 ..     173     216 .. 0.82
   5 ?    3.5   0.0      0.15   1.2e+02       9      40 ..     215     246 ..     208     249 .. 0.85
   6 ?    6.2   0.0     0.021        18       4      28 ..     244     268 ..     241     278 .. 0.82
   7 !   16.2   0.0   1.2e-05      0.01       8      38 ..     293     323 ..     287     334 .. 0.90
   8 ?    0.8   0.0       1.1   9.3e+02      15      44 .]     342     371 ..     339     371 .. 0.85
   9 ?   -0.2   0.0       2.3     2e+03       8      39 ..     369     402 ..     363     407 .. 0.72
  10 ?    0.8   0.1       1.1   9.4e+02      13      37 ..     410     434 ..     405     443 .. 0.76

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 1.2
   PF13428.1  8 arallalGdpdeAiallrralalaPd 33
                a+a  +  +++eA++   ++  +aP+
  MMETSP1325-20131115|5798_1 24 AAAAVQCKQFQEALDKILQLPDDAPQ 49
                77888999999999988888666665 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.001
   PF13428.1  5 lalarallalGdpdeAiallrralalaPd 33
                  +   l++  ++++A+++++ +++++Pd
  MMETSP1325-20131115|5798_1 57 NIYCVCLWQTDQLEDALKAFNTLIEDFPD 85
                55667799********************8 PP

  == domain 3    score: 14.3 bits;  conditional E-value: 5.1e-05
   PF13428.1   5 lalarallalGdpdeAiallrralalaPddaealllLa 42 
                   ++++l+++ d+++A+++++ al   P+  ea ++L+
  MMETSP1325-20131115|5798_1 143 NNYGIVLMEQKDFAQALQCFELALDVRPECVEAMHNLG 180
                 5799*****************************99997 PP

  == domain 4    score: 3.1 bits;  conditional E-value: 0.2
   PF13428.1   5 lalarallalGdpdeAiallrralalaPddaeal 38 
                   l+  +++ + +++A + + +a+a+ Pd   al
  MMETSP1325-20131115|5798_1 177 HNLGLSCIRVNLYEKAYENFSKAVAARPDLSIAL 210
                 678889999999****************966665 PP

  == domain 5    score: 3.5 bits;  conditional E-value: 0.15
   PF13428.1   9 rallalGdpdeAiallrralalaPddaealll 40 
                 + l a+ ++de i+++  a+++ P+d + l++
  MMETSP1325-20131115|5798_1 215 ECLVAMARYDEVIEQCGIAIQQLPNDHRPLFM 246
                 568899*******************9887766 PP

  == domain 6    score: 6.2 bits;  conditional E-value: 0.021
   PF13428.1   4 llalarallalGdpdeAiallrral 28 
                 l +++  ++++G+++eA+  l++  
  MMETSP1325-20131115|5798_1 244 LFMRGYSYAQQGRHEEALPDLEAGM 268
                 7899**************9988865 PP

  == domain 7    score: 16.2 bits;  conditional E-value: 1.2e-05
   PF13428.1   8 arallalGdpdeAiallrralalaPddaeal 38 
                 ++a l+ G++ eA+ l+++a+ ++P++a++ 
  MMETSP1325-20131115|5798_1 293 GEAALEEGRFGEALPLFQKAIDADPKNAAVN 323
                 7999***********************9975 PP

  == domain 8    score: 0.8 bits;  conditional E-value: 1.1
   PF13428.1  15 GdpdeAiallrralalaPddaealllLarl 44 
                 G  d+Ai  l+++l+++ +   a+++ ++l
  MMETSP1325-20131115|5798_1 342 GLNDAAISTLKEILKADRTMKPAQIAFGQL 371
                 67799***********99998898888775 PP

  == domain 9    score: -0.2 bits;  conditional E-value: 2.3
   PF13428.1   8 arallalGdpdeAiallrrala..laPddaeall 39 
                 ++++  l+d+  A  ++  al+  l Pdda++ +
  MMETSP1325-20131115|5798_1 369 GQLHCLLEDYITADSAFTTALSidLEPDDADVMY 402
                 6677777888888888999988335699988765 PP

  == domain 10    score: 0.8 bits;  conditional E-value: 1.1
   PF13428.1  13 alGdpdeAiallrralalaPddaea 37 
                 ++++ ++A++ +r++l l  d+  a
  MMETSP1325-20131115|5798_1 410 RNENRQGALDRFRQVLTLEADHQMA 434
                 7788899999999999887776544 PP

>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1         6   5.1e+03       9      24 ..     269     284 ..     268     284 .. 0.87
   2 !   51.9   0.7   4.4e-17   3.8e-14       1      36 []     585     620 .]     585     620 .] 1.00

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 6
                 HHTSS-HHHHTTS-HH CS
  PF02209.14   9 evFgMtkeeFykLPaW 24 
                 e F+ + + + k + W
  MMETSP1325-20131115|5798_1 269 ECFKGSPTDYKKFKRW 284
                 7899999999999999 PP

  == domain 2    score: 51.9 bits;  conditional E-value: 4.4e-17
                 GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT-- CS
  PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgLF 36 
                 YL+ ++F+ vF M+ eeF + PaWK++ lKk +gLF
  MMETSP1325-20131115|5798_1 585 YLTNDEFQAVFEMSPEEFEAAPAWKKMTLKKNKGLF 620
                 9**********************************9 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.41   3.5e+02      10      28 ..      62      80 ..      61      81 .. 0.86
   2 !   10.9   0.0   0.00033      0.28       5      32 ..     143     170 ..     139     172 .. 0.90
   3 !    6.3   0.0    0.0097       8.3       3      32 ..     175     204 ..     173     206 .. 0.86
   4 !    9.8   0.0   0.00075      0.64       3      25 ..     243     265 ..     241     269 .. 0.88
   5 !    8.2   0.0    0.0025       2.1       7      33 ..     292     318 ..     287     319 .. 0.89
   6 ?    2.7   0.0      0.13   1.2e+02      15      32 ..     342     359 ..     339     361 .. 0.86
   7 ?   -2.4   0.0       5.7   4.9e+03      14      31 ..     375     392 ..     366     392 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.41
                HHHHTT-HHHHHHHHH--- CS
   PF13181.1 10 iYrqlGdydkAkeylekal 28
                +++q+ + + A+++++  +
  MMETSP1325-20131115|5798_1 62 CLWQTDQLEDALKAFNTLI 80
                68999**********9765 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00033
                 TT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekalelkp 32 
                 +n G ++++ +d+ +A++++e al+  p
  MMETSP1325-20131115|5798_1 143 NNYGIVLMEQKDFAQALQCFELALDVRP 170
                 78999*******************9877 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.0097
                 -TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkp 32 
                 a +nlG+     + y+kA+e + ka+   p
  MMETSP1325-20131115|5798_1 175 AMHNLGLSCIRVNLYEKAYENFSKAVAARP 204
                 66789999999999***********98777 PP

  == domain 4    score: 9.8 bits;  conditional E-value: 0.00075
                 -TTT---HHHHTT-HHHHHHHHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeyle 25 
                  ++++G+ Y+q G++++A+  le
  MMETSP1325-20131115|5798_1 243 PLFMRGYSYAQQGRHEEALPDLE 265
                 689***************98877 PP

  == domain 5    score: 8.2 bits;  conditional E-value: 0.0025
                 ---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1   7 lGdiYrqlGdydkAkeylekalelkpr 33 
                 +G++ ++ G++ +A+  ++ka++ +p+
  MMETSP1325-20131115|5798_1 292 KGEAALEEGRFGEALPLFQKAIDADPK 318
                 78999999*****************95 PP

  == domain 6    score: 2.7 bits;  conditional E-value: 0.13
                 T-HHHHHHHHH---HHHH CS
   PF13181.1  15 GdydkAkeylekalelkp 32 
                 G  d+A++ l+++l+ ++
  MMETSP1325-20131115|5798_1 342 GLNDAAISTLKEILKADR 359
                 66799**********987 PP

  == domain 7    score: -2.4 bits;  conditional E-value: 5.7
                 TT-HHHHHHHHH---HHH CS
   PF13181.1  14 lGdydkAkeylekalelk 31 
                 l dy  A +++  al+++
  MMETSP1325-20131115|5798_1 375 LEDYITADSAFTTALSID 392
                 778999999**9999986 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00031      0.27       9      32 ..      62      85 ..      58      86 .. 0.91
   2 ?    4.9   0.0     0.044        37       6      31 ..     145     170 ..     144     171 .. 0.81
   3 ?    6.4   0.0     0.015        13       1      32 [.     174     205 ..     174     205 .. 0.93
   4 !    7.1   0.0    0.0088       7.5       3      20 ..     244     261 ..     244     266 .. 0.89
   5 ?    5.1   0.0     0.039        33       6      32 ..     292     318 ..     290     319 .. 0.88
   6 ?    2.8   0.0      0.21   1.8e+02       4      28 ..     327     356 ..     324     358 .. 0.88
   7 ?    2.7   0.0      0.23   1.9e+02       1      28 [.     399     426 ..     399     431 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00031
                HHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  9 syyklgdtdeAlealerlikeyPd 32
                ++ ++++ ++Al+a++ li+++Pd
  MMETSP1325-20131115|5798_1 62 CLWQTDQLEDALKAFNTLIEDFPD 85
                778888*****************8 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.044
                 HHHHHHHHHHHHHHHHHHHHHHHH-T CS
   PF13174.1   6 lalsyyklgdtdeAlealerlikeyP 31 
                 ++ ++ +++d+++Al+ +e  ++  P
  MMETSP1325-20131115|5798_1 145 YGIVLMEQKDFAQALQCFELALDVRP 170
                 577777889**********9887666 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.015
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   1 dAlyklalsyyklgdtdeAlealerlikeyPd 32 
                 +A+ +l+ls ++ + +++A e + + ++  Pd
  MMETSP1325-20131115|5798_1 174 EAMHNLGLSCIRVNLYEKAYENFSKAVAARPD 205
                 79**********66*************99997 PP

  == domain 4    score: 7.1 bits;  conditional E-value: 0.0088
                 HHHHHHHHHHHHHHHHHH CS
   PF13174.1   3 lyklalsyyklgdtdeAl 20 
                 l+++++sy ++g+++eAl
  MMETSP1325-20131115|5798_1 244 LFMRGYSYAQQGRHEEAL 261
                 89***************8 PP

  == domain 5    score: 5.1 bits;  conditional E-value: 0.039
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   6 lalsyyklgdtdeAlealerlikeyPd 32 
                  +++ ++ g++ eAl ++++ i+  P+
  MMETSP1325-20131115|5798_1 292 KGEAALEEGRFGEALPLFQKAIDADPK 318
                 588899978**************9998 PP

  == domain 6    score: 2.8 bits;  conditional E-value: 0.21
                 HHHHHHHHHH.....HHHHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyykl.....gdtdeAlealerlik 28 
                 ++ al++++l     g  d+A+ +l++++k
  MMETSP1325-20131115|5798_1 327 FNKALCQLNLddgtnGLNDAAISTLKEILK 356
                 889999999889999999********9997 PP

  == domain 7    score: 2.7 bits;  conditional E-value: 0.23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   1 dAlyklalsyyklgdtdeAlealerlik 28 
                 d++y+ + + +++ + + Al+ ++++++
  MMETSP1325-20131115|5798_1 399 DVMYNHGVVILRNENRQGALDRFRQVLT 426
                 68999997777755***********997 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.043        36      13      34 .]     139     160 ..     134     160 .. 0.90
   2 ?    1.1   0.0      0.61   5.2e+02       2      31 ..     162     191 ..     161     194 .. 0.73
   3 ?   -2.4   0.0       8.1   6.9e+03       2      17 ..     196     211 ..     195     225 .. 0.79
   4 !   12.1   0.0   0.00018      0.16       5      33 ..     233     261 ..     230     262 .. 0.94
   5 !    7.9   0.0     0.004       3.4       1      25 [.     308     335 ..     308     346 .. 0.78
   6 !   10.8   0.0   0.00049      0.42       5      32 ..     390     417 ..     388     419 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.043
   PF13431.1  13 adaynnLAelllnnGdleeAeq 34 
                 +++ nn++ +l +++d+++A+q
  MMETSP1325-20131115|5798_1 139 FNVANNYGIVLMEQKDFAQALQ 160
                 57889***************97 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.61
   PF13431.1   2 yekaleldPnnadaynnLAelllnnGdlee 31 
                 +e al+  P+ ++a++nL++   + + +e+
  MMETSP1325-20131115|5798_1 162 FELALDVRPECVEAMHNLGLSCIRVNLYEK 191
                 6778888888899******87666555555 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 8.1
   PF13431.1   2 yekaleldPnnadayn 17 
                 + ka++  P+ + a+ 
  MMETSP1325-20131115|5798_1 196 FSKAVAARPDLSIALI 211
                 6799999999998875 PP

  == domain 4    score: 12.1 bits;  conditional E-value: 0.00018
   PF13431.1   5 aleldPnnadaynnLAelllnnGdleeAe 33 
                 a+++ Pn++  ++++++ ++ +G++eeA+
  MMETSP1325-20131115|5798_1 233 AIQQLPNDHRPLFMRGYSYAQQGRHEEAL 261
                 78888**********************96 PP

  == domain 5    score: 7.9 bits;  conditional E-value: 0.004
   PF13431.1   1 lyekaleldPnnadayn...nLAellln 25 
                 l++ka++ dP+na +     n+A++ ln
  MMETSP1325-20131115|5798_1 308 LFQKAIDADPKNAAVNVvkfNKALCQLN 335
                 69**********9876655566666665 PP

  == domain 6    score: 10.8 bits;  conditional E-value: 0.00049
   PF13431.1   5 aleldPnnadaynnLAelllnnGdleeA 32 
                 +++l+P++ad+++n +++ l+n + + A
  MMETSP1325-20131115|5798_1 390 SIDLEPDDADVMYNHGVVILRNENRQGA 417
                 699*************988877766655 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       7.9   6.7e+03      39      50 ..      27      38 ..      21      50 .. 0.62
   2 ?   -0.1   0.0      0.91   7.8e+02       5      27 ..      63      85 ..      61     106 .. 0.67
   3 !   19.4   0.0   7.3e-07   0.00062       5      64 ..     149     208 ..     147     213 .. 0.94
   4 !   15.7   0.1   1.1e-05    0.0092      25      54 ..     237     266 ..     219     273 .. 0.90
   5 ?    0.4   0.0      0.63   5.4e+02      38      65 ..     295     322 ..     292     326 .. 0.79
   6 ?    3.7   0.1      0.06        51      20      65 ..     389     434 ..     385     442 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 7.9
   PF13371.1 39 laqlgclaaAae 50
                 +q  ++++A++
  MMETSP1325-20131115|5798_1 27 AVQCKQFQEALD 38
                455555555554 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.91
   PF13371.1  5 ylreedferALavverllllaPd 27
                +++ ++ e AL++ + l++  Pd
  MMETSP1325-20131115|5798_1 63 LWQTDQLEDALKAFNTLIEDFPD 85
                45666777777776666666655 PP

  == domain 3    score: 19.4 bits;  conditional E-value: 7.3e-07
   PF13371.1   5 ylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapd 64 
                 +++++df++AL++ e+ l + P+ ++     Gl   + + ++ A e ++ +++  pd + 
  MMETSP1325-20131115|5798_1 149 LMEQKDFAQALQCFELALDVRPECVEAMHNLGLSCIRVNLYEKAYENFSKAVAARPDLSI 208
                 799***************************************************998665 PP

  == domain 4    score: 15.7 bits;  conditional E-value: 1.1e-05
   PF13371.1  25 aPddpyerRDrGlllaqlgclaaAaedLea 54 
                  P+d++ +  rG+ +aq+g++++A+ dLea
  MMETSP1325-20131115|5798_1 237 LPNDHRPLFMRGYSYAQQGRHEEALPDLEA 266
                 6999************************97 PP

  == domain 5    score: 0.4 bits;  conditional E-value: 0.63
   PF13371.1  38 llaqlgclaaAaedLeaflelcpdapda 65 
                 +  + g++ +A+  ++ +++ +p   ++
  MMETSP1325-20131115|5798_1 295 AALEEGRFGEALPLFQKAIDADPKNAAV 322
                 5566799**************9977766 PP

  == domain 6    score: 3.7 bits;  conditional E-value: 0.06
   PF13371.1  20 rllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapda 65 
                 +++ l Pdd+   +  G +  + ++ ++A++ +++ l l+ d++ a
  MMETSP1325-20131115|5798_1 389 LSIDLEPDDADVMYNHGVVILRNENRQGALDRFRQVLTLEADHQMA 434
                 567799*******************************888765544 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0     0.006       5.1       6      33 ..     146     171 ..     143     174 .. 0.80
   2 ?    4.0   0.0     0.053        45       1      29 [.     175     203 ..     175     210 .. 0.79
   3 ?   -3.0   0.0         9   7.7e+03      12      24 ..     220     232 ..     215     240 .. 0.67
   4 ?    2.9   0.0      0.12   1.1e+02       8      24 ..     250     266 ..     244     278 .. 0.84
   5 ?    5.6   0.0     0.016        14       8      35 ..     295     320 ..     292     321 .. 0.85
   6 !    7.2   0.0    0.0051       4.4       6      35 ..     369     398 ..     367     399 .. 0.94
   7 ?   -0.9   0.0       1.9   1.7e+03      13      31 ..     412     428 ..     409     433 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.006
   PF13176.1   6 arlysrlgdyekAielyeraLaltkdpl 33 
                 + + +++ d+ +A++++e   al+  p+
  MMETSP1325-20131115|5798_1 146 GIVLMEQKDFAQALQCFEL--ALDVRPE 171
                 55678999***********..8877776 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.053
   PF13176.1   1 allnLarlysrlgdyekAielyeraLalt 29 
                 a +nL+  + r++ yekA e + +a a +
  MMETSP1325-20131115|5798_1 175 AMHNLGLSCIRVNLYEKAYENFSKAVAAR 203
                 679***************99888854444 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 9
   PF13176.1  12 lgdyekAielyer 24 
                 + +y++ ie +  
  MMETSP1325-20131115|5798_1 220 MARYDEVIEQCGI 232
                 5688999888776 PP

  == domain 4    score: 2.9 bits;  conditional E-value: 0.12
   PF13176.1   8 lysrlgdyekAielyer 24 
                  y ++g++e+A+  +e+
  MMETSP1325-20131115|5798_1 250 SYAQQGRHEEALPDLEA 266
                 599********987776 PP

  == domain 5    score: 5.6 bits;  conditional E-value: 0.016
   PF13176.1   8 lysrlgdyekAielyeraLaltkdplda 35 
                 +  + g++ +A+ l+++  a++ dp +a
  MMETSP1325-20131115|5798_1 295 AALEEGRFGEALPLFQK--AIDADPKNA 320
                 55689************..**9999875 PP

  == domain 6    score: 7.2 bits;  conditional E-value: 0.0051
   PF13176.1   6 arlysrlgdyekAielyeraLaltkdplda 35 
                 ++l++ l dy +A ++++ aL ++ +p+da
  MMETSP1325-20131115|5798_1 369 GQLHCLLEDYITADSAFTTALSIDLEPDDA 398
                 79**********************999986 PP

  == domain 7    score: -0.9 bits;  conditional E-value: 1.9
   PF13176.1  13 gdyekAielyeraLaltkd 31 
                  +++ A++ +++  +lt +
  MMETSP1325-20131115|5798_1 412 ENRQGALDRFRQ--VLTLE 428
                 68999*******..55544 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         4   3.4e+03      12      23 ..      63      74 ..      61      76 .. 0.86
   2 !   10.9   0.0   0.00034      0.29       5      32 ..     142     169 ..     140     169 .. 0.93
   3 ?    4.5   0.0     0.036        31       4      30 ..     175     202 ..     173     203 .. 0.78
   4 ?    6.2   0.1      0.01       8.8      11      27 ..     250     266 ..     248     270 .. 0.83
   5 ?    4.5   0.1     0.037        32      16      29 ..     300     313 ..     293     315 .. 0.86
   6 ?   -1.1   0.0       2.1   1.8e+03      14      31 ..     410     427 ..     398     431 .. 0.74

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 4
   PF13374.1 12 lrargryeeAla 23
                l++++++e+Al+
  MMETSP1325-20131115|5798_1 63 LWQTDQLEDALK 74
                899*******86 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00034
   PF13374.1   5 lnnLAlalrargryeeAlaleeealair 32 
                 +nn +++l++++++++Al+ +e al++r
  MMETSP1325-20131115|5798_1 142 ANNYGIVLMEQKDFAQALQCFELALDVR 169
                 7********************9999876 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.036
   PF13374.1   4 alnnLAlalrargryeeA.laleeeala 30 
                 a++nL+l + + + ye+A +++  +++a
  MMETSP1325-20131115|5798_1 175 AMHNLGLSCIRVNLYEKAyENFSKAVAA 202
                 9*****************5555555544 PP

  == domain 4    score: 6.2 bits;  conditional E-value: 0.01
   PF13374.1  11 alrargryeeAlaleee 27 
                  ++++gr+eeAl+ +e+
  MMETSP1325-20131115|5798_1 250 SYAQQGRHEEALPDLEA 266
                 599*********97765 PP

  == domain 5    score: 4.5 bits;  conditional E-value: 0.037
   PF13374.1  16 gryeeAlaleeeal 29 
                 gr++eAl+l+++a 
  MMETSP1325-20131115|5798_1 300 GRFGEALPLFQKAI 313
                 9**********985 PP

  == domain 6    score: -1.1 bits;  conditional E-value: 2.1
   PF13374.1  14 argryeeAlaleeealai 31 
                 +  +++ Al+ ++++l++
  MMETSP1325-20131115|5798_1 410 RNENRQGALDRFRQVLTL 427
                 667889999999999986 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       6.3   5.4e+03       7      21 ..      59      73 ..      54      73 .. 0.80
   2 ?   -0.3   0.0       2.3     2e+03       6      25 ..     144     163 ..     141     163 .. 0.78
   3 !   11.1   0.0   0.00048      0.41       2      21 ..     242     261 ..     241     265 .. 0.91
   4 ?    5.9   0.0     0.022        19       8      24 ..     293     309 ..     289     311 .. 0.89
   5 ?   -2.3   0.0       9.7   8.3e+03       7      17 ..     436     446 ..     433     447 .. 0.74

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 6.3
                -HHHHHH-------H CS
   PF07721.9  7 LArallalGdldeAr 21
                ++  l++  +l++A+
  MMETSP1325-20131115|5798_1 59 YCVCLWQTDQLEDAL 73
                56789*******996 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 2.3
                 --HHHHHH-------HHHHH CS
   PF07721.9   6 aLArallalGdldeAralle 25 
                 +++ +l ++ d+++A++ +e
  MMETSP1325-20131115|5798_1 144 NYGIVLMEQKDFAQALQCFE 163
                 56777778889****99765 PP

  == domain 3    score: 11.1 bits;  conditional E-value: 0.00048
                 HHH---HHHHHH-------H CS
   PF07721.9   2 rallaLArallalGdldeAr 21 
                 r l++++  ++++G+++eA+
  MMETSP1325-20131115|5798_1 242 RPLFMRGYSYAQQGRHEEAL 261
                 67899**************8 PP

  == domain 4    score: 5.9 bits;  conditional E-value: 0.022
                 HHHHHH-------HHHH CS
   PF07721.9   8 ArallalGdldeArall 24 
                 ++a+l+ G++ eA+ l+
  MMETSP1325-20131115|5798_1 293 GEAALEEGRFGEALPLF 309
                 79***********9886 PP

  == domain 5    score: -2.3 bits;  conditional E-value: 9.7
                 -HHHHHH---- CS
   PF07721.9   7 LArallalGdl 17 
                  A  +l++Gd 
  MMETSP1325-20131115|5798_1 436 AAIRALERGDV 446
                 47778999996 PP

>> PF13525.1  Outer membrane lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.017        14     103     122 ..      66      85 ..      19      88 .. 0.89
   2 ?    5.5   0.0     0.011       9.3      51     126 ..     295     386 ..     239     448 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.017
   PF13525.1 103 pseakeafedfkeLveryPd 122
                 ++++++a++ f++L+e++Pd
  MMETSP1325-20131115|5798_1  66 TDQLEDALKAFNTLIEDFPD 85 
                 67899**************9 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.011
   PF13525.1  51 AyykskdyeaaiataerFirlyPrhpnvdYvlYmrgl..............snlkqdksllrsdrdpseakeafedfkeLvery..PdSeYa 126
                 A++++ ++ +a+   ++ i   P++  v+ v + ++l              ++++  k++l++dr ++ a+ af +++ L+e+y   dS+++
  MMETSP1325-20131115|5798_1 295 AALEEGRFGEALPLFQKAIDADPKNAAVNVVKFNKALcqlnlddgtnglndAAISTLKEILKADRTMKPAQIAFGQLHCLLEDYitADSAFT 386
                 666667777777778888888888899999999999955444444444444555557777799********************943455555 PP

>> PF04957.7  Ribosome modulation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0019       1.7      13      31 ..     245     263 ..     239     269 .. 0.87
   2 ?    0.3   0.0      0.61   5.2e+02       2      33 ..     279     310 ..     278     315 .. 0.87
   3 ?   -2.2   0.2       3.7   3.2e+03      37      46 ..     475     484 ..     470     487 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0019
   PF04957.7  13 fsrGYqaGvsGrskeacPy 31 
                 f rGY ++ +Gr++ea+P 
  MMETSP1325-20131115|5798_1 245 FMRGYSYAQQGRHEEALPD 263
                 89***************96 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.61
   PF04957.7   2 krqKRDrlerafsrGYqaGvsGrskeacPyqt 33 
                 k+ KR  ++ a ++G  a  +Gr  ea+P  +
  MMETSP1325-20131115|5798_1 279 KKFKRWIFHIAAKKGEAALEEGRFGEALPLFQ 310
                 88899999*******999999*****999755 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 3.7
   PF04957.7  37 rseWlgGWRe 46 
                 r  W++G R+
  MMETSP1325-20131115|5798_1 475 RPAWMKGLRK 484
                 789****985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (620 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 1.09u 0.35s 00:00:01.44 Elapsed: 00:00:00.64
# Mc/sec: 2321.47
//
Query:       MMETSP1325-20131115|5801_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 355.32
//
Query:       MMETSP1325-20131115|5802_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|5803_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 373.83
//
Query:       MMETSP1325-20131115|5804_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 364.06
//
Query:       MMETSP1325-20131115|5800_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 500.67
//
Query:       MMETSP1325-20131115|5808_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-05   23.1   0.1    3.3e-05   23.0   0.1    1.0  1  PF03224.9 V-ATPase subunit H
  ------ inclusion threshold ------
      0.066   12.5   0.0      0.078   12.3   0.0    1.2  1  PF10924.3 Protein of unknown function (DUF2711)


Domain annotation for each model (and alignments):
>> PF03224.9  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1   4.9e-09   3.3e-05      14      85 ..      17      88 ..       4      89 .] 0.80

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 4.9e-09
   PF03224.9 14 kipWegyvrsq.liseedlklikaldkkkkeqraklldedgpqyvklll..nLlskltskedtlqyiLvliddll 85
                ++pW+ +vr++  +se++++l+k+ ++  +e    +l +++++ + +++  ++l+ +ts+ +  qy L+ i+d+l
  MMETSP1325-20131115|5808_1 17 NVPWDDFVRAKgFLSEQEVNLLKKTEESGLEY---VLGDQAEAAELVYVlqKILNMITSDVSAQQYALTRIEDIL 88
                89******98549**************66666...7755555444444455**********************98 PP

>> PF10924.3  Protein of unknown function (DUF2711)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.1e-05     0.078      46     111 ..       8      73 ..       4      89 .] 0.78

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.1e-05
   PF10924.3  46 keeilkigkpvsWkkvmsksGlnslaelalalltsitalreeykredlaekLeenldedlYyPseD 111
                  ee+l+  + v+W +  +  G+ s++e+ l   t  ++l      +  a +L  +l++ l + + D
  MMETSP1325-20131115|5808_1   8 REEVLNSFSNVPWDDFVRAKGFLSEQEVNLLKKTEESGLEYVLGDQAEAAELVYVLQKILNMITSD 73 
                 79****************************999999998776666666666777776666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|5810_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 260.66
//
Query:       MMETSP1325-20131115|5811_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 508.03
//
Query:       MMETSP1325-20131115|5812_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.99    8.5   3.8        1.2    8.2   2.7    1.1  1  PF07420.6 Protein of unknown function (DUF1509)


Domain annotation for each model (and alignments):
>> PF07420.6  Protein of unknown function (DUF1509)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   2.7   8.7e-05       1.2     313     346 ..      36      69 ..      25      73 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 8.7e-05
   PF07420.6 313 elrrpshsesgerrvsrrnrsesrsrsrsrsger 346
                 + +++ +++s +r +s r  +++r r r+r ++r
  MMETSP1325-20131115|5812_1  36 KKKQVERAASLDREGSSRRARQNRNRDRARDRDR 69 
                 457889999*********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       483  (0.0353277); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 442.81
//
Query:       MMETSP1325-20131115|5813_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00017   21.2  12.1    0.00024   20.8   8.4    1.2  1  PF01363.16 FYVE zinc finger
     0.0071   16.0   5.8     0.0092   15.7   4.0    1.2  1  PF01485.16 IBR domain
  ------ inclusion threshold ------
      0.047   13.1   0.4      0.096   12.1   0.3    1.4  1  PF12551.3  Poly-beta-hydroxybutyrate polymerase N terminal
       0.51   10.0   6.9       0.88    9.2   4.8    1.4  1  PF13639.1  Ring finger domain


Domain annotation for each model (and alignments):
>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   8.4   7.1e-08   0.00024      10      42 ..      65      98 ..      57     107 .. 0.81

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 7.1e-08
  PF01363.16 10 kkCeiCakkFslt.rrrhhCrlCGkvvCskCssk 42
                 kC+iC ++F++  r +hhCr+C   +C+++ ++
  MMETSP1325-20131115|5813_1 65 GKCHICMRRFKFGrRSKHHCRVCFGEFCAEHGET 98
                58********9973669***********887655 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   4.0   2.7e-06    0.0092      19      60 ..      61     101 ..      36     110 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.7e-06
  PF01485.16  19 kwCprpdCeaiiekekgakkssvtCskCgfefCflCkkewHe 60 
                 + C + +C+  ++  k   +s+ +C++C  efC ++++  H+
  MMETSP1325-20131115|5813_1  61 NACKG-KCHICMRRFKFGRRSKHHCRVCFGEFCAEHGETKHS 101
                 46755.78888888888877788****************998 PP

>> PF12551.3  Poly-beta-hydroxybutyrate polymerase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   2.8e-05     0.096      21      35 ..      15      29 ..      13      29 .. 0.95

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.8e-05
   PF12551.3 21 TgGlSPaalalAylD 35
                Tg++SPaal++A +D
  MMETSP1325-20131115|5813_1 15 TGSVSPAALGTAGMD 29
                9***********998 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.8   0.00026      0.88       2      42 ..      66     108 ..      65     109 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00026
   PF13639.1   2 eCaiCldelsegeevvrlpCgHvfHeeCldewlrssn...sCPl 42 
                 +C iC++ ++ g +  + +C+ +f e C ++  ++++   sCP+
  MMETSP1325-20131115|5813_1  66 KCHICMRRFKFG-RRSKHHCRVCFGEFCAEHGETKHSwytSCPV 108
                 7********764.446889**********99988884555**97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 506.40
//
Query:       MMETSP1325-20131115|5815_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-10   39.2   0.0    3.1e-08   33.1   0.0    2.1  2  PF00085.15 Thioredoxin
  ------ inclusion threshold ------
      0.087   12.9   0.0       0.24   11.4   0.0    1.7  2  PF13098.1  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.0    0.0038        26      64      86 ..       3      25 ..       1      47 [. 0.83
   2 !   33.1   0.0   4.6e-12   3.1e-08       2     102 ..      63     167 ..      62     169 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0038
                HHHHTT--SSSEEEEESSSSEEE CS
  PF00085.15 64 laseygvegiPtlklfkngkkve 86
                + ++++++g P +k+f++g++ +
  MMETSP1325-20131115|5815_1  3 IGERFDIDGHPIFKWFPKGQTDA 25
                56899**************9865 PP

  == domain 2    score: 33.1 bits;  conditional E-value: 4.6e-12
                 EEESSHHHHHHHHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-..TSEEEE..EETTTTHHHHHHTT--SSSEEEEESSSSEEEEE---..-HHHHHHHHH CS
  PF00085.15   2 vlvltkenfeeevaksdklvlvefyApwCGhCkalaPeyeklaeelke..kvvlak..vdvdenkdlaseygvegiPtlklfkngkkveevega.rekeklvaflk 102
                 v++lt+++fee+v +++k+v+   y+pw    + ++  ++k+ +++++  +v+l+k  +++ +++d+a++++ + +P ++++ +++k e+++g+  +   +++fl+
  MMETSP1325-20131115|5815_1  63 VHKLTEDKFEEYVFDKSKHVMAYLYSPWA-DRQDIKLCMDKVGKAFENveSVQLVKlaIETIKERDIADRFDLKDYPGFLFYDANGKWEKYTGEfGDPRGMIDFLN 167
                 6899************************6.55999999999999999999666665116777999****************************9666666776666 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.65   4.4e+03      74      90 ..       3      19 ..       2      26 .. 0.76
   2 ?   11.4   0.0   3.5e-05      0.24      31     101 ..      69     154 ..      58     164 .. 0.63

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.65
   PF13098.1 74 lgrklgvrgtPtivfld 90
                +g++++++g P +  ++
  MMETSP1325-20131115|5815_1  3 IGERFDIDGHPIFKWFP 19
                78999999999887664 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 3.5e-05
   PF13098.1  31 ndvtkyl...kdkfeviyvnidkskerseavldkdge........kevkl.....eekelgrklgvrgtPtivfldgeGklvarlpG 101
                 +++++y+   ++++ ++  + + ++++ +  +dk g+        + vkl     +e++++ +++++  P ++f+d++Gk   +++G
  MMETSP1325-20131115|5815_1  69 DKFEEYVfdkSKHVMAYLYSPWADRQDIKLCMDKVGKafenvesvQLVKLaietiKERDIADRFDLKDYPGFLFYDANGK-WEKYTG 154
                 34555653334455555556677776666667766664433333322222323234458*******************98.556666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 892.76
//
Query:       MMETSP1325-20131115|5816_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|5817_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0029   17.3   0.2     0.0057   16.3   0.2    1.5  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.2   4.2e-07    0.0057       1      24 [.     117     140 ..     117     141 .] 0.89

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 4.2e-07
                 ---SEEE.E.E-.---EEEEETTT- CS
  PF00397.21   1 lppgWeersddd.dGrvYYyNheTg 24 
                 lp+gW++++d d     Y+yN ++g
  MMETSP1325-20131115|5817_1 117 LPEGWVVYFD-DaRREAYFYNSTNG 140
                 79*******5.669*******9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 675.77
//
Query:       MMETSP1325-20131115|5818_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|5789_1  [L=702]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-29  101.5   0.0    4.2e-29  101.0   0.0    1.2  1  PF04096.9 Nucleoporin autopeptidase


Domain annotation for each model (and alignments):
>> PF04096.9  Nucleoporin autopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.0   0.0   3.1e-33   4.2e-29       1     139 [.     563     700 ..     563     702 .] 0.93

  Alignments for each domain:
  == domain 1    score: 101.0 bits;  conditional E-value: 3.1e-33
                 S---BS-HHHHCCS-CCHHCCB-S-EE--TT---EEESS-B--TTS----TBTTTEEEETTEEEESTT-.......S----------S-EEEEEES---B-TTT--B---TTSTHHHHHHHHHCC.-TT-EEEEE-TT--EEEEEES CS
   PF04096.9   1 gYwtsPsieeLskmsleelksvenFtvgrkgyGsieFlepvdLseidldelfgkiveleskevevYpde.......ekkppvGegLNvpAeitlenvkpkdkktkkpikdeekealekkikklke.kkgaeFvsydpetgtwvfkvk 139
                 gY t+P ++eL++ s ++lk+ve+F v r g+Gsi++++pvdL+++dld      v++e+  v+vY++e       ++kp++Ge+LN pA++ l+n++p ++++ ++i+d     + +k++++++  +ga F+sy   tg  vf ++
  MMETSP1325-20131115|5789_1 563 GYSTTPDLKELKHSSVQDLKKVEGFSVTRAGVGSIRWTSPVDLVGVDLD----AHVTIEQGFVSVYEQEhgeespsSTKPRRGEKLNSPAVVVLHNIWPSNRASPQRIRD-----YPAKVESKTNgFPGASFLSYSLATGDLVFAIE 700
                 7************************************************....***************99*9999888**************************999976.....5556766665379****************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.09u 0.37s 00:00:01.46 Elapsed: 00:00:00.66
# Mc/sec: 2548.85
//
Query:       MMETSP1325-20131115|5821_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       705  (0.0515652); expected 273.4 (0.02)
Passed bias filter:                      614  (0.0449093); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 441.68
//
Query:       MMETSP1325-20131115|5824_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-06   25.3   0.1    8.2e-06   24.6   0.0    1.4  1  PF00036.27 EF hand
    5.5e-05   23.1   0.0    9.9e-05   22.3   0.0    1.4  2  PF13499.1  EF-hand domain pair
    9.4e-05   21.4   0.1    0.00016   20.7   0.1    1.4  1  PF13202.1  EF hand
    0.00061   19.2   0.0    0.00086   18.7   0.0    1.4  1  PF13833.1  EF-hand domain pair
    0.00084   18.9   0.3     0.0024   17.4   0.2    1.7  2  PF13405.1  EF-hand domain


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0     3e-09   8.2e-06       3      26 ..      18      41 ..      16      43 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 3e-09
                HHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkeal 26
                ++ +  +D+DgdG +s++Efk+++
  MMETSP1325-20131115|5824_1 18 EKSIMNMDTDGDGEVSLDEFKAWW 41
                677889***************986 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   3.6e-08   9.9e-05      37      65 ..      12      40 ..       2      41 .. 0.82
   2 ?   -2.5   0.0       1.9   5.1e+03      17      22 ..      49      54 ..      43      65 .. 0.54

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 3.6e-08
   PF13499.1 37 evrevldyifkelDkngdGvlsfeEflqa 65
                e+  ++++ + ++D++gdG +s++Ef ++
  MMETSP1325-20131115|5824_1 12 ETTSSVEKSIMNMDTDGDGEVSLDEFKAW 40
                56667888899***************976 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.9
   PF13499.1 17 ldkeeL 22
                l k+eL
  MMETSP1325-20131115|5824_1 49 LLKQEL 54
                333333 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   5.7e-08   0.00016       8      23 ..      24      39 ..      18      43 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 5.7e-08
                H--S----B-HHHHHH CS
   PF13202.1  8 fDlNgDGkIsreELkr 23
                +D++gDG +s +E+k+
  MMETSP1325-20131115|5824_1 24 MDTDGDGEVSLDEFKA 39
                8*************96 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   3.2e-07   0.00086      34      50 ..      24      40 ..       2      43 .. 0.90

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 3.2e-07
   PF13833.1 34 fDtdgdGkisfeEFcvl 50
                +DtdgdG +s++EF++ 
  MMETSP1325-20131115|5824_1 24 MDTDGDGEVSLDEFKAW 40
                8*************985 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.2   8.9e-07    0.0024       9      25 ..      24      40 ..      22      55 .. 0.88
   2 ?   -1.4   0.0         1   2.7e+03       4      15 ..      53      63 ..      49      65 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 8.9e-07
                C-------B---HHHHH CS
   PF13405.1  9 fDkdgdGkidaeELrda 25
                +D+dgdG+++++E++++
  MMETSP1325-20131115|5824_1 24 MDTDGDGEVSLDEFKAW 40
                7*************995 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 1
                ---GCC------ CS
   PF13405.1  4 eaFklfDkdgdG 15
                e+F  +  + +G
  MMETSP1325-20131115|5824_1 53 ELFARYAAT-TG 63
                789888765.55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|5823_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-22   77.4   0.2    1.1e-21   76.9   0.1    1.2  1  PF01789.11 PsbP


Domain annotation for each model (and alignments):
>> PF01789.11  PsbP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   0.1   8.1e-26   1.1e-21      16     173 ..      20     168 ..       6     170 .. 0.84

  Alignments for each domain:
  == domain 1    score: 76.9 bits;  conditional E-value: 8.1e-26
                 X---..---EEEE-S----EEEE----EEE--.TTE.EEEEE-SS-TT.SEEEEEEE--SS--.-STT---TTT---HHHHHTTS-TT---EEEEEEEEEEEETTEEEEEEEEEEE-----EEEEEEEEEE----EEEEEEEEEGGGHHHHHHHHHHHHHT- CS
  PF01789.11  16 ckaktaaglqayvdtkdgYeflyPsgWtevev.dGq.dvvfrDliesd.envsvvvssvdkkk.sledlGspeevgerllkkvlaeegstreaelleasereadgktYYdlevlvkladegdrhelatvtvergkLYtlklqtnekrwekvkkllervvdSF 173
                  k+k    l++y+d + g+++  PsgW + +  +G  ++ ++Dl+ ++ e + v+ ++v++++ s++ lG  +evg++l         +++++el++a++ +++g  +Y +e++++     d h+l  + v++gkL++++++++ekrw kv++l  +   SF
  MMETSP1325-20131115|5823_1  20 SKTKMGGLLESYSDVGKGWRINKPSGWNQFDTlPGVyEMKWEDLVATNrEVLMVTTTPVKSTTtSVDMLGDVTEVGKKL--------AGKQKKELVSAKAVDKEGILFYMFEFKTE-----DGHQLFQLCVNKGKLWSVDASAPEKRWGKVSELYTNSLLSF 168
                 33344445799********************997763789****99872555677777777768**************9........456799*******************9864.....479*******************************9999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 901.24
//
Query:       MMETSP1325-20131115|5820_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       514  (0.0375951); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 774.21
//
Query:       MMETSP1325-20131115|5827_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 937.70
//
Query:       MMETSP1325-20131115|5825_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-44  150.0   0.1    6.6e-44  149.7   0.1    1.1  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.7   0.1   4.9e-48   6.6e-44       2     154 ..       3     152 ..       2     153 .. 0.88

  Alignments for each domain:
  == domain 1    score: 149.7 bits;  conditional E-value: 4.9e-48
  PF00160.16   2 vdietsskGrivieLfedkaPktvenFlklakegfYdgtkfhrvikgfmiqgGdpsgkgangeekkagges.....ipdEikkkklkh.krGalamartgpepnsngsqFfItlgdaphlDgkytvFGkVvegmdvvekieavetde..kpeknvkiksvg 154
                 v+++t ++G+++ie+  d +Pk + nF+ l+ +g Ydgt+fhr +k+fmiqgGdp+g+g        gges     ++dE++ + l+h +rG+++ma++g   n+n  qFfIt++++phl++kytv+G+V++g+++++++e+v++++  +p +++ki++v+
  MMETSP1325-20131115|5825_1   3 VTLHT-TLGELKIEIACDIVPKSAFNFMALCASGQYDGTIFHRNMKNFMIQGGDPTGTGK-------GGESiwggtFDDEFSGE-LRHdRRGVVSMANKG--ANTNRAQFFITYSKQPHLNNKYTVIGRVIDGFEALDAMERVPVGKkdRPLSEIKINNVQ 152
                 67788.49**********************************************999977.......3332222339****755.677588******998..5***************************************7777777********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 1068.38
//
Query:       MMETSP1325-20131115|5829_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 626.74
//
Query:       MMETSP1325-20131115|5830_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.53
# Mc/sec: 777.69
//
Query:       MMETSP1325-20131115|5832_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-07   30.9   0.0    2.9e-07   30.4   0.0    1.2  1  PF02214.17 K+ channel tetramerisation domain


Domain annotation for each model (and alignments):
>> PF02214.17  K+ channel tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   2.1e-11   2.9e-07      41      92 ..      18      70 ..       4      72 .. 0.80

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 2.1e-11
  PF02214.17 41 eneyffDRspkaFetiLnyyrtg..gklhrpeelclksfleElefygleelaie 92
                 +++f+DR+p++F++iL+++r +      r++++ l+ +  E+ef gl+ l  +
  MMETSP1325-20131115|5832_1 18 VRKIFLDRDPDLFAIILQFMRANrlPAAVRSDSVLLDDLCGEAEFLGLDAL-SQ 70
                578*******************654344466789999***********998.55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|5831_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-54  182.3   0.0      1e-53  182.1   0.0    1.1  1  PF00022.14 Actin


Domain annotation for each model (and alignments):
>> PF00022.14  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.1   0.0   7.3e-58     1e-53       4     190 ..      22     209 ..      19     227 .. 0.89

  Alignments for each domain:
  == domain 1    score: 182.1 bits;  conditional E-value: 7.3e-58
  PF00022.14   4 vsavVlDnGssttkaGfagedaPkavipsvvgkprgekvea.klyvgdealekrpelevrnpvedGvvedwdameelwehvlkeelkvdp.....eehpllltepplnppanrekateivfEkfkvpalylaksavlsayasgkatglvvDsGasvtsvvpvleGlvLkkairrldlgGkalteqlkellssk 190
                 + ++VlD Gs++tk+G++ged+P++++psvv +p  ++ ++ +  v d a +     +  +pv++G+v+dwd+me+lw+h++  el++ p     +  p+llteppln ++ re++++++fE+fk pa+++++savls++asg++ g+v++sG++ ts+vp++eG++L++a+ r +l+G+++t++l+ +l ++
  MMETSP1325-20131115|5831_1  22 EGVIVLDAGSGSTKIGYSGEDTPRSIFPSVVDHPVLNEGTSrRPDVMDGADD-----SSVHPVKRGMVTDWDQMERLWDHTFGTELRTYPetgsvNGVPVLLTEPPLNDKKSREQMARLMFETFKAPAVCICNSAVLSLFASGRTRGVVLESGSGLTSAVPIFEGFSLPHATLRENLAGQDVTQHLQGTLAMQ 209
                 679*******************************998765543333333222.....4456****************************966666789****************************************************************************************9999884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1119.93
//
Query:       MMETSP1325-20131115|5833_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|5835_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.018   14.4   0.0    1.3  1  PF13683.1 Integrase core domain


Domain annotation for each model (and alignments):
>> PF13683.1  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.3e-06     0.018      17      47 ..     100     131 ..      87     133 .] 0.91

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.3e-06
   PF13683.1  17 glvEsfngtlkdellneel.frslaearekie 47 
                 +++Es  +tlk e++++e  +++laeareki+
  MMETSP1325-20131115|5835_1 100 AKAESSLQTLKAEIIQSETrQSRLAEAREKIT 131
                 89*****************999********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.45s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 612.91
//
Query:       MMETSP1325-20131115|5836_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-20   70.7  10.8    1.2e-13   50.3   2.1    2.6  3  PF13414.1  TPR repeat
    2.6e-10   39.3   7.4    1.4e-05   24.3   0.3    3.8  4  PF00515.23 Tetratricopeptide repeat
    5.3e-08   32.0  14.5      0.011   15.4   0.2    4.5  5  PF07719.12 Tetratricopeptide repeat
    5.9e-06   26.6   4.0    0.00013   22.3   0.5    3.2  3  PF13432.1  Tetratricopeptide repeat
    4.6e-05   22.7   2.5        1.1    9.0   0.0    3.8  4  PF13181.1  Tetratricopeptide repeat
    9.4e-05   22.0   2.3     0.0019   17.9   0.1    2.9  2  PF13371.1  Tetratricopeptide repeat
    0.00023   21.0   1.4      0.037   14.1   0.1    3.0  2  PF13431.1  Tetratricopeptide repeat
      0.002   17.9   5.5     0.0029   17.4   3.8    1.2  1  PF11208.3  Protein of unknown function (DUF2992)
  ------ inclusion threshold ------
      0.014   15.0   0.7      0.014   15.0   0.5    1.6  2  PF04534.7  Herpesvirus UL56 protein
      0.025   14.4   0.4      0.025   14.4   0.3    2.7  2  PF13424.1  Tetratricopeptide repeat
      0.035   13.7   0.3        1.1    9.1   0.0    3.1  3  PF13176.1  Tetratricopeptide repeat
      0.058   13.4   2.9       0.11   12.5   2.0    1.4  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
       0.48   11.0  10.1       0.85   10.3   0.0    3.7  3  PF13428.1  Tetratricopeptide repeat
       0.85   10.1   6.4        1.9    9.0   4.5    1.6  1  PF05318.7  Tombusvirus movement protein
        1.1    7.7   5.6        1.5    7.3   3.9    1.1  1  PF11917.3  Protein of unknown function (DUF3435)


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   2.1   1.3e-16   1.2e-13       2      69 .]      29      94 ..      28      94 .. 0.96
   2 !   32.4   0.7   5.2e-11   4.7e-08      22      68 ..      82     127 ..      81     128 .. 0.96
   3 ?   -3.0   0.3       5.6   5.1e+03      10      21 ..     171     182 ..     165     187 .. 0.48

  Alignments for each domain:
  == domain 1    score: 50.3 bits;  conditional E-value: 1.3e-16
   PF13414.1  2 nAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                +A ++k ++  + + gdy++A+++y+ Al+ +p +a  y+n+A ++lk+  ++ +Al+d++ A+el+P
  MMETSP1325-20131115|5836_1 29 KAGEHKMAAGDAKSSGDYAKAVDEYTAALACSP-SALTYANRADCLLKMK-RPCAALADCNAAIELNP 94
                78899****************************.9**************6.8**************99 PP

  == domain 2    score: 32.4 bits;  conditional E-value: 5.2e-11
   PF13414.1  22 AieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleld 68 
                 A++ ++ A+el+p++a+++  ++++ + lgk +e+A +d+ kA+++d
  MMETSP1325-20131115|5836_1  82 ALADCNAAIELNPDSAKALKIRGKCNRYLGK-WEAAQTDLAKAMSID 127
                 999***************************6.7***********997 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 5.6
   PF13414.1  10 Gnalfkegdyde 21 
                 +n++ +++  + 
  MMETSP1325-20131115|5836_1 171 ANEAARKKAQEA 182
                 444444433333 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       4.3   3.9e+03      15      20 ..      25      30 ..      24      33 .. 0.77
   2 ?    5.7   0.0     0.011        10      14      32 ..      43      61 ..      40      62 .. 0.87
   3 !   24.3   0.3   1.5e-08   1.4e-05       1      33 [.      63      95 ..      63      96 .. 0.95
   4 !   11.5   0.1   0.00018      0.16       1      31 [.      97     127 ..      97     129 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 4.3
                T-HHHH CS
  PF00515.23 15 gkydeA 20
                g++++A
  MMETSP1325-20131115|5836_1 25 GDFEKA 30
                889998 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.011
                TT-HHHHHHHHHHHHHHHT CS
  PF00515.23 14 lgkydeAleyyekALelnP 32
                 g+y +A++ y  AL   P
  MMETSP1325-20131115|5836_1 43 SGDYAKAVDEYTAALACSP 61
                69*************8777 PP

  == domain 3    score: 24.3 bits;  conditional E-value: 1.5e-08
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  1 akalynlGnaylklgkydeAleyyekALelnPn 33
                a ++ n++ ++lk++++  Al++++ A+elnP+
  MMETSP1325-20131115|5836_1 63 ALTYANRADCLLKMKRPCAALADCNAAIELNPD 95
                678*****************************8 PP

  == domain 4    score: 11.5 bits;  conditional E-value: 0.00018
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALeln 31 
                 akal+ +G + ++lgk++ A  +  kA +++
  MMETSP1325-20131115|5836_1  97 AKALKIRGKCNRYLGKWEAAQTDLAKAMSID 127
                 89**********************9998887 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.9   3.6e+03      14      21 ..      24      31 ..      23      33 .. 0.76
   2 !   11.6   0.1   0.00021      0.19      13      33 ..      42      62 ..      30      63 .. 0.88
   3 !   15.4   0.2   1.3e-05     0.011       1      33 [.      63      95 ..      63      96 .. 0.94
   4 !   13.6   0.0   4.6e-05     0.042       1      31 [.      97     127 ..      97     130 .. 0.93
   5 ?   -2.9   1.3       8.7     8e+03      18      29 ..     173     184 ..     169     188 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 3.9
                TT-HHHHH CS
  PF07719.12 14 lgdyeeAl 21
                +gd+e+A 
  MMETSP1325-20131115|5836_1 24 SGDFEKAG 31
                58999995 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00021
                HTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12 13 klgdyeeAleafekAleldPn 33
                 +gdy++A++ +  Al+  P 
  MMETSP1325-20131115|5836_1 42 SSGDYAKAVDEYTAALACSPS 62
                58***************9995 PP

  == domain 3    score: 15.4 bits;  conditional E-value: 1.3e-05
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  1 aealynlGlayyklgdyeeAleafekAleldPn 33
                a  + n++++++k++++  Al++++ A+el+P+
  MMETSP1325-20131115|5836_1 63 ALTYANRADCLLKMKRPCAALADCNAAIELNPD 95
                56799***************************8 PP

  == domain 4    score: 13.6 bits;  conditional E-value: 4.6e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a+al  +G++ ++lg++e A  ++ kA ++d
  MMETSP1325-20131115|5836_1  97 AKALKIRGKCNRYLGKWEAAQTDLAKAMSID 127
                 789999*********************9987 PP

  == domain 5    score: -2.9 bits;  conditional E-value: 8.7
                 HHHHHHHHHHHH CS
  PF07719.12  18 eeAleafekAle 29 
                 e A++  ++A +
  MMETSP1325-20131115|5836_1 173 EAARKKAQEAAK 184
                 568888888876 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.5   1.5e-07   0.00013       4      65 .]      37      97 ..      35      97 .. 0.94
   2 !   12.7   0.1   0.00016      0.14      15      57 ..      81     124 ..      81     133 .. 0.86
   3 ?   -1.9   2.2       5.8   5.3e+03      41      54 ..     173     186 ..     163     197 .. 0.48

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 1.5e-07
   PF13432.1  4 ArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPddp 65
                A ++  +Gdy++A++ + aala  P  a  + ++a++ll+++r+ +A+a  +aa++l+Pd++
  MMETSP1325-20131115|5836_1 37 AGDAKSSGDYAKAVDEYTAALACSP-SALTYANRADCLLKMKRPCAALADCNAAIELNPDSA 97
                6677789******************.9********************************986 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 0.00016
   PF13432.1  15 eAlaaleaalalaPeaaeallllaeallrlgrldeAa.allraa 57 
                 +Ala  +aa++l+P+ a al  ++ +   lg++++A   l +a+
  MMETSP1325-20131115|5836_1  81 AALADCNAAIELNPDSAKALKIRGKCNRYLGKWEAAQtDLAKAM 124
                 6999********************************97776665 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 5.8
   PF13432.1  41 llrlgrldeAaall 54 
                  +++++ +eAa+  
  MMETSP1325-20131115|5836_1 173 EAARKKAQEAAKRE 186
                 33333333333333 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       8.6   7.9e+03      15      20 ..      25      30 ..      24      33 .. 0.79
   2 ?    2.7   0.0      0.13   1.2e+02      13      32 ..      42      61 ..      40      64 .. 0.85
   3 !    8.9   0.0    0.0013       1.2       3      33 ..      65      95 ..      63      96 .. 0.94
   4 !    9.0   0.0    0.0012       1.1       2      31 ..      98     127 ..      97     130 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 8.6
                T-HHHH CS
   PF13181.1 15 GdydkA 20
                Gd++kA
  MMETSP1325-20131115|5836_1 25 GDFEKA 30
                899999 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.13
                HTT-HHHHHHHHH---HHHH CS
   PF13181.1 13 qlGdydkAkeylekalelkp 32
                + Gdy kA   +  al  +p
  MMETSP1325-20131115|5836_1 42 SSGDYAKAVDEYTAALACSP 61
                67*********999997776 PP

  == domain 3    score: 8.9 bits;  conditional E-value: 0.0013
                -TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekalelkpr 33
                +y n++d+++++++  +A++  + a+el+p+
  MMETSP1325-20131115|5836_1 65 TYANRADCLLKMKRPCAALADCNAAIELNPD 95
                699**************************96 PP

  == domain 4    score: 9.0 bits;  conditional E-value: 0.0012
                 --TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelk 31 
                 ka+  +G++ r lG++++A   l ka +++
  MMETSP1325-20131115|5836_1  98 KALKIRGKCNRYLGKWEAAQTDLAKAMSID 127
                 677789********************9987 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.19   1.8e+02      42      63 ..      43      64 ..      40      71 .. 0.82
   2 !   17.9   0.1   2.1e-06    0.0019       9      59 ..      77     127 ..      72     138 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.19
   PF13371.1 42 lgclaaAaedLeaflelcpdap 63
                 g++a A+++++a+l+ +p+a 
  MMETSP1325-20131115|5836_1 43 SGDYAKAVDEYTAALACSPSAL 64
                5899999999999999888764 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 2.1e-06
   PF13371.1   9 edferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelc 59 
                 +++ +ALa ++  ++l+Pd++  +  rG +   lg ++aA +dL  ++  +
  MMETSP1325-20131115|5836_1  77 KRPCAALADCNAAIELNPDSAKALKIRGKCNRYLGKWEAAQTDLAKAMSID 127
                 56679***************************************9988443 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.039        36       2      27 ..      53      77 ..      52      79 .. 0.86
   2 !   14.1   0.1     4e-05     0.037       2      33 ..      86     117 ..      85     118 .. 0.95

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.039
   PF13431.1  2 yekaleldPnnadaynnLAelllnnG 27
                y  al+++P +a  y n+A +ll+ +
  MMETSP1325-20131115|5836_1 53 YTAALACSP-SALTYANRADCLLKMK 77
                899999999.5*********999765 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 4e-05
   PF13431.1   2 yekaleldPnnadaynnLAelllnnGdleeAe 33 
                 ++ a+el+P++a a+  ++++   +G++e A+
  MMETSP1325-20131115|5836_1  86 CNAAIELNPDSAKALKIRGKCNRYLGKWEAAQ 117
                 689**************************997 PP

>> PF11208.3  Protein of unknown function (DUF2992)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   3.8   3.2e-06    0.0029      32     100 ..     129     192 ..     109     196 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 3.2e-06
   PF11208.3  32 ePkdeeilefilkklselkfteavkvkkkkekkknpKrlqRevkkevkkkkvstkAqealklelekkkk 100
                  P+++e+l+f++ k+ +++  +++k  k +ek+ + K ++R+++ e+ +     kAqea k e+e++++
  MMETSP1325-20131115|5836_1 129 DPDMQELLKFVQGKFAAIQGKATKKRLK-EEKEAKKKIAERKAANEAAR----KKAQEAAKREQEEQRR 192
                 7*****************9988888777.88888888889998887776....8999999999998765 PP

>> PF04534.7  Herpesvirus UL56 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         5   4.5e+03      61      84 ..      16      39 ..       5      67 .. 0.67
   2 ?   15.0   0.5   1.5e-05     0.014      71     121 ..     160     214 ..     151     257 .. 0.63

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 5
   PF04534.7 61 pvrPassgdgevsergrsrraaqr 84
                p  P+  g g+  + g  + aa  
  MMETSP1325-20131115|5836_1 16 PAMPSGEGSGDFEKAGEHKMAAGD 39
                556666666666666666666544 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 1.5e-05
   PF04534.7  71 evsergrsrraaqraarrarrraerra...rrrsfga.gglfvstPlflPetrla 121
                 e+ ++   r+aa  aar+  + a +r    +rr+ +a gg++   P ++P+ + +
  MMETSP1325-20131115|5836_1 160 EAKKKIAERKAANEAARKKAQEAAKREqeeQRRAAAAgGGMPGGMPGGMPGGMPG 214
                 5555555666666666666666555531224555554156666667766665433 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.4    0.0016       1.4      16      76 ..      41      93 ..      33      95 .. 0.82
   2 ?   14.4   0.3   2.7e-05     0.025       7      75 ..      65     126 ..      61     129 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0016
   PF13424.1 16 rrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                +  gdy +A + y  al+        +p  a ++ n a+++l++++  +Al+  + A+e+ 
  MMETSP1325-20131115|5836_1 41 KSSGDYAKAVDEYTAALAC-------SPS-ALTYANRADCLLKMKRPCAALADCNAAIELN 93
                5679999999999999976.......687.9999999999999999999998888888775 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.7e-05
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                 ++ n a++l+++++   Al+ ++ a+el       +pd a+al   + + ++lg+ ++A   l kA+ i
  MMETSP1325-20131115|5836_1  65 TYANRADCLLKMKRPCAALADCNAAIEL-------NPDSAKALKIRGKCNRYLGKWEAAQTDLAKAMSI 126
                 788***********************98.......6999***************************987 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.5   3.2e+03      12      18 ..      24      30 ..      23      33 .. 0.84
   2 ?    9.1   0.0    0.0012       1.1      11      28 ..      42      59 ..      36      67 .. 0.86
   3 ?    0.5   0.0      0.67   6.1e+02      11      26 ..     109     124 ..     103     131 .. 0.72

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 3.5
   PF13176.1 12 lgdyekA 18
                +gd+ekA
  MMETSP1325-20131115|5836_1 24 SGDFEKA 30
                69****9 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0012
   PF13176.1 11 rlgdyekAielyeraLal 28
                ++gdy kA++ y++aLa 
  MMETSP1325-20131115|5836_1 42 SSGDYAKAVDEYTAALAC 59
                68************8875 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.67
   PF13176.1  11 rlgdyekAielyeraL 26 
                  lg++e A + + +a+
  MMETSP1325-20131115|5836_1 109 YLGKWEAAQTDLAKAM 124
                 4899999988777744 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.0   0.00012      0.11       3      83 ..      44     122 ..      42     123 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00012
                 T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83 
                 ++y +A+  +  +la sp+   +  + + A cl++++++ +A+  ++   el++ s+++  + ++c   lgk++ A++ L k
  MMETSP1325-20131115|5836_1  44 GDYAKAVDEYTAALACSPS---ALTYANRADCLLKMKRPCAALADCNAaIELNPDSAKALKIRGKCNRYLGKWEAAQTDLAK 122
                 5677777778888888873...4566669*****************88999999998888888**************99887 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00093      0.85      10      37 ..      39      66 ..      30      72 .. 0.80
   2 ?    7.0   0.1      0.01       9.4       3      39 ..      65     101 ..      63     106 .. 0.86
   3 ?   -0.9   0.0       3.5   3.2e+03      14      29 ..     110     125 ..     100     138 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00093
   PF13428.1 10 allalGdpdeAiallrralalaPddaea 37
                    +Gd+++A++ + +ala +P+ +++
  MMETSP1325-20131115|5836_1 39 DAKSSGDYAKAVDEYTAALACSPSALTY 66
                56679*****************996654 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.01
   PF13428.1   3 allalarallalGdpdeAiallrralalaPddaeall 39 
                 +++ +a+ ll + +p +A+a +++a++l+Pd+a al+
  MMETSP1325-20131115|5836_1  65 TYANRADCLLKMKRPCAALADCNAAIELNPDSAKALK 101
                 57788999999999999****************9985 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 3.5
   PF13428.1  14 lGdpdeAiallrrala 29 
                 lG +++A   l +a +
  MMETSP1325-20131115|5836_1 110 LGKWEAAQTDLAKAMS 125
                 5666666666666644 PP

>> PF05318.7  Tombusvirus movement protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   4.5    0.0021       1.9      13      44 ..     149     181 ..     131     198 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0021
   PF05318.7  13 drtgkkkkagkrgkkk.akrsvAsdAvrkkres 44 
                 ++t k+ k +k  kkk a r+ A++A+rkk ++
  MMETSP1325-20131115|5836_1 149 KATKKRLKEEKEAKKKiAERKAANEAARKKAQE 181
                 7788888999999999************85444 PP

>> PF11917.3  Protein of unknown function (DUF3435)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   3.9    0.0016       1.5     243     348 ..      85     190 ..      74     195 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0016
   PF11917.3 243 dvqavvlglppqealiraatsmsrsiDprrPkeLtdeqkasveedpelqelkrkreelkkeleakygqvakakgtelyeelekakrevrnerqrlrrelkkkiree 348
                 d +a++   p   + +++ ++ +r   ++   +   ++  s++ dp++qel + ++   + ++ k+ + + ++++e+++++ ++k+  + +r+++++++k++  e+
  MMETSP1325-20131115|5836_1  85 DCNAAIELNPDSAKALKIRGKCNRYLGKWEAAQTDLAKAMSIDFDPDMQELLKFVQGKFAAIQGKATKKRLKEEKEAKKKIAERKAANEAARKKAQEAAKREQEEQ 190
                 7777777777788889999999999999999999999999****************9999999999999999999999****************999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1809  (0.132314); expected 273.4 (0.02)
Passed bias filter:                     1002  (0.0732885); expected 273.4 (0.02)
Passed Vit filter:                       169  (0.012361); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.76u 0.55s 00:00:01.31 Elapsed: 00:00:00.61
# Mc/sec: 1052.83
//
Query:       MMETSP1325-20131115|5840_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   15.1   0.1      0.031   14.5   0.1    1.3  1  PF00653.16 Inhibitor of Apoptosis domain
      0.052   11.9   0.0      0.063   11.6   0.0    1.1  1  PF05975.7  Bacterial ABC transporter protein EcsB
       0.13   11.7   0.0       0.19   11.2   0.0    1.2  1  PF04126.8  Cyclophilin-like


Domain annotation for each model (and alignments):
>> PF00653.16  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   6.9e-06     0.031      34      61 ..      16      43 ..       9      51 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 6.9e-06
  PF00653.16 34 kdnvrCfyCkleldgweeeddpleeHlk 61
                + +++Cf C+l+ +++++ed+ +e+H  
  MMETSP1325-20131115|5840_1 16 DMTTKCFICGLNASEFNREDSGFENHIS 43
                6789****************99999976 PP

>> PF05975.7  Bacterial ABC transporter protein EcsB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.4e-05     0.063     259     281 ..      42      63 ..      35      78 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.4e-05
   PF05975.7 259 lkknkkktflylylrsflRsgdy 281
                 ++k ++++f ylylr++lRs+d 
  MMETSP1325-20131115|5840_1  42 ISK-EHNMFYYLYLREYLRSKDP 63 
                 455.59**************995 PP

>> PF04126.8  Cyclophilin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.1e-05      0.19      57      80 ..      74      97 ..      61     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.1e-05
                B--------EEE----EEEEE--- CS
   PF04126.8 57 kevveagdiaYwppgkalciffGk 80
                  v+++g +aY p gkal+i  G 
  MMETSP1325-20131115|5840_1 74 AGVINQGSVAYVPIGKALAIGRGT 97
                56899***************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.55
# Mc/sec: 492.34
//
Query:       MMETSP1325-20131115|5841_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-07   29.8   0.0    4.9e-07   29.7   0.0    1.0  1  PF12697.2 Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   3.6e-11   4.9e-07     151     225 ..      11      86 ..       3      87 .] 0.75

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 3.6e-11
                 --GGGG....GG------HHHH...TT--S-EEEEE-----HHHHHHHHHHHHHSTTEEEEE---SSSS-...-HHHH CS
   PF12697.2 151 daaalaellraalldadlreal...arldvPvlviageaDrvvppeearrlaealpgarvvvlpgagHllfleapdev 225
                 +a+a+ ++l+   +  +l+e+l   + l++Pv+v+ ge+D+++pp  + +l + ++  rv+ l+  gH+++ e p  v
  MMETSP1325-20131115|5841_1  11 SAEAVFDTLSY--SAGPLPEQLlcdELLKAPVWVCFGEKDPWTPPKRVLALERFSSVERVIPLSRVGHCPMDESPSTV 86 
                 55666666665..4444444441223479**********************87555558999************9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        76  (0.00555881); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:01.02
# Mc/sec: 204.40
//
Query:       MMETSP1325-20131115|5837_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.009   15.6   0.7      0.015   14.8   0.5    1.3  1  PF13639.1 Ring finger domain
  ------ inclusion threshold ------
      0.038   13.6   0.4      0.071   12.8   0.3    1.4  1  PF13923.1 Zinc finger, C3HC4 type (RING finger)
      0.083   12.9   0.5       0.15   12.1   0.2    1.5  1  PF12678.2 RING-H2 zinc finger


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.5   3.4e-06     0.015      23      45 ..       3      28 ..       2      29 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.4e-06
   PF13639.1 23 HvfHeeCldewlrssn...sCPlCrk 45
                H+fH +Cl+ wl+  +    C +C +
  MMETSP1325-20131115|5837_1  3 HLFHGRCLKPWLQVAKgppLCLTCET 28
                9***********98643448888876 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   1.6e-05     0.071      23      45 ..       3      27 ..       2      28 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.6e-05
   PF13923.1 23 HlyCkkCieqwleks..kkkCPiCr 45
                Hl++ +C++ wl+ +   + C +C+
  MMETSP1325-20131115|5837_1  3 HLFHGRCLKPWLQVAkgPPLCLTCE 27
                **************876668****7 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   3.2e-05      0.15      54      74 ..       3      26 ..       1      27 [. 0.82

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.2e-05
   PF12678.2 54 HaFHlhCiskWlktrk...tCPlc 74
                H FH  C++ Wl+ +k    C +c
  MMETSP1325-20131115|5837_1  3 HLFHGRCLKPWLQVAKgppLCLTC 26
                9************99955666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.32s 00:00:00.78 Elapsed: 00:00:01.18
# Mc/sec: 351.33
//
Query:       MMETSP1325-20131115|5842_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.69
# Mc/sec: 340.35
//
Query:       MMETSP1325-20131115|5843_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 735.25
//
Query:       MMETSP1325-20131115|5845_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0026   17.0   0.1     0.0076   15.5   0.1    1.6  1  PF05175.9 Methyltransferase small domain
  ------ inclusion threshold ------
      0.028   14.3   0.1       0.14   12.0   0.0    1.9  2  PF13659.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   1.1e-06    0.0076       8      46 ..       1      55 [.       1      56 [] 0.81

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.1e-06
                ---TT--------HHHHHHS-TT.....----.............--B-------HH CS
   PF05175.9  8 pGVFskgklDaGselLletlpkk.....lagk.............vlDlGcGaGvlg 46
                pG F+ g lD+ ++ Ll++lp       +  +             v+D++cG G ++
  MMETSP1325-20131115|5845_1  1 PGLFAGGGLDIMTAALLQALPLMspvncP--DaadasgdwvrkprVMDFCCGSGTIA 55
                799*****************987554441..04456677888999*********997 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0     0.077   5.3e+02      92     107 ..      10      25 ..       3      35 .. 0.72
   2 ?   12.0   0.0     2e-05      0.14       2      15 ..      42      55 ..      41      56 .] 0.90

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.077
   PF13659.1  92 dlydafleaaarllkp 107
                 d+++a+l +a++l++p
  MMETSP1325-20131115|5845_1  10 DIMTAALLQALPLMSP 25 
                 4566777777777665 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 2e-05
   PF13659.1  2 drvldpgcGsGtfl 15
                +rv+d +cGsGt++
  MMETSP1325-20131115|5845_1 42 PRVMDFCCGSGTIA 55
                79**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 285.52
//
Query:       MMETSP1325-20131115|5847_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|5846_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-34  119.4   0.0    1.4e-34  119.2   0.0    1.0  1  PF04106.7 Autophagy protein Apg5


Domain annotation for each model (and alignments):
>> PF04106.7  Autophagy protein Apg5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.2   0.0     1e-38   1.4e-34       1     190 [.      36     205 .]      36     205 .] 0.96

  Alignments for each domain:
  == domain 1    score: 119.2 bits;  conditional E-value: 1e-38
   PF04106.7   1 WhlPvGvLyDllageeeltkseqlpwnltvhfsdyPeeelirleseesvkeafinslKeAdfvkngtskkimnLskedskqlwksvknhnldefkrinkkllpssskkfrniPvriylpsklkviqelieplkeegqeltledalsellpelfeskeeeelakvviqGievpleapleelvenlkypdnf 190
                 W+lP+Gv yDl+  ++       lpw+ltvhf+++Pe++l++ ++e    ++f ++lK++ f+ +g+s   m++ ke+++ lw +++ h+  ef+rin++l+   s++   +P+r+ ++ + +v qe++     +g+++tl+++l+ l p +      +     v++G++++l++p+ +l+  ++ypd +
  MMETSP1325-20131115|5846_1  36 WQLPMGVAYDLYQPTA-------LPWQLTVHFQSFPEKILLKGDAE----QHFYHQLKQSLFLEHGSSSVAMAITKEEQTSLWAALQRHESLEFSRINRRLK---SESPMTVPMRVLVKGE-PVSQEPVAAACADGEPTTLGSVLEGLFPGVD-----PASYDAVTHGVHLELDTPIADLWGAVCYPDHW 205
                 ***********96443.......48*****************9998....9***************************************************...99999***********.****************************985.....899999************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 963.24
//
Query:       MMETSP1325-20131115|5838_1  [L=578]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-31  106.3   0.0    1.1e-30  105.7   0.0    1.3  1  PF00179.21 Ubiquitin-conjugating enzyme
    4.7e-18   65.7   0.1    4.7e-18   65.7   0.1    2.9  4  PF13519.1  von Willebrand factor type A domain
    5.7e-13   48.8   0.0    1.2e-12   47.7   0.0    1.5  1  PF00092.23 von Willebrand factor type A domain
    0.00044   19.1   0.3     0.0019   17.0   0.0    2.0  2  PF06707.6  Protein of unknown function (DUF1194)
     0.0081   15.9   0.0      0.013   15.2   0.0    1.3  1  PF05773.17 RWD domain
  ------ inclusion threshold ------
       0.13   11.8   0.0       0.25   10.9   0.0    1.4  1  PF05743.8  UEV domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.7   0.0   4.9e-34   1.1e-30      15     126 ..     434     543 ..     413     560 .. 0.86

  Alignments for each domain:
  == domain 1    score: 105.7 bits;  conditional E-value: 4.9e-34
                 TCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-----B-HGGGSTTT--TT--HHHHHHHHHHHHHS--TTS-SSHHHHHHHH CS
  PF00179.21  15 egikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvdetGeicldiLkeekWspaltlesvLlsiqsllaepnpesplnkeaakllk 126
                 egi+  + ++ ++  +k++i+gp+g++++gg+F l+i++p++YPf++P+++f+t  +H+nv+e+G icldiL++  W p l++ + L si ++l++p++e++l++ +a+l+ 
  MMETSP1325-20131115|5838_1 434 EGIHLFPDNA-DVHLMKALIEGPAGSVFAGGVFALNIRVPQDYPFRAPHITFETVPYHCNVSESGAICLDILQSG-WGPQLSIPKALESIRVMLKDPDTENALRQWIAELTL 543
                 5667777775.99************************************************************77.***************************999997654 PP

>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.51   1.2e+03      36      78 ..      46      89 ..      28     128 .. 0.66
   2 !   65.7   0.1   2.1e-21   4.7e-18       2     161 ..     134     312 ..     134     320 .. 0.85
   3 ?   -3.0   0.0       2.6     6e+03     148     171 ..     394     417 ..     376     418 .. 0.79
   4 ?   -1.1   0.1       0.7   1.6e+03      60      92 ..     531     563 ..     519     570 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.51
   PF13519.1 36 lp.gdrvglvafsgsaelvapltsdraalkaalnsldprlmpgg 78
                ++ +d +++v+ +g  +++  +  d+++  +a +++  +++p++
  MMETSP1325-20131115|5838_1 46 MNlDDAMAVVGVTGATSVADLAMVDTQMAIDAATQAGLKMIPAQ 89
                44466777777777666555555666666666666666665544 PP

  == domain 2    score: 65.7 bits;  conditional E-value: 2.1e-21
   PF13519.1   2 lvlvlDvSgSMnae.dv.............sptrldaakaalkdlldel....pgd.rvglvafsgsaelvapltsdraalkaalnsldprlmpgggtnlaaalalalell....akadgrraaivlvtDGedn..ssdieaasalkragikiyvvgvgsdegaeallkelaeatggryfdassd 161
                 + +++D+SgSM++  d              +++r+da+k+++ ++ d+      g+ +vgl+ f++ +e  +plt+  ++++a +++++p    + +t+++ a+  a ++l    a ++++   ++ +tDG++n  + ++ea++a+ r g+ + ++ +g++ +  ++l+++a+ tgg +f+++s 
  MMETSP1325-20131115|5838_1 134 VAIAIDRSGSMRTGfDEakahgenaektleKRSRMDAVKQVFYAFRDRTetlgHGAhQVGLFQFDSIVEEMLPLTDALDTFEAVVDDMQP----RRQTAIYSAIIGACRMLepvhATSPDTDLRVLALTDGQNNtgAPPLEALRAANRIGAVVDAIIIGDKPD--DNLRKIAKCTGGSVFHIASL 312
                 5799*******7764336778888888887799***********9998444443336**************************9999997....5****************444334559999*********997666779*******************988..6***************9654 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 2.6
   PF13519.1 148 aeatggryfdassdaeeleaalre 171
                 + a+gg+  +a+s++ +++++++e
  MMETSP1325-20131115|5838_1 394 SNASGGASAKATSSGGSVKRIMKE 417
                 567888888888888888888876 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 0.7
   PF13519.1  60 raalkaalnsldprlmpgggtnlaaalalalel 92 
                  +al++++ +l+  ++ +g+ +++ a  +a+++
  MMETSP1325-20131115|5838_1 531 ENALRQWIAELTLAYRQSGDVRYETAARAATQQ 563
                 578999999999999999999999888888876 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0   5.4e-16   1.2e-12       2     171 ..     134     314 ..     134     321 .. 0.82

  Alignments for each domain:
  == domain 1    score: 47.7 bits;  conditional E-value: 5.4e-16
                 EEEEEE-STTS-H...................HHHHHHHHHHHHHHHHH..CCTTTEEEEEEEESSSEEEEE-TCCHHCCSSCGGHH-CCGGSTTS-B-HHHHHHHHHHHTTSTTSHHHTTSEEEEEEE-----C---STHHHHHHHHHH.GEEEEEEEE--SCCCHHHHHHCS-SSTTCCCB-STSSHHH CS
  PF00092.23   2 ivfvlDgSgSige...................enfekvkefikkliekld.igpdsvrvglvqyssdaktevslndfkskeellsavsknlkylgggtntgkALkyalenlfssaagsrenapkvvillTDGksndggspeaaaaklrek.klgitvfgvGvsdvdeeelrsiaskpdseghvfrltdfda 171
                 +++++D SgS++                    +++++vk++   + ++ +  g+   +vgl q++s +++  +l+d+    +  +av  ++ ++  +t++ +A+  a ++l+   +   +++   v+ lTDG++n+g  p+ +a +++++ +  +  + +G      ++lr+ia  ++++g vf++++ ++
  MMETSP1325-20131115|5838_1 134 VAIAIDRSGSMRTgfdeakahgenaektlekrSRMDAVKQVFYAFRDRTEtLGHGAHQVGLFQFDSIVEEMLPLTDA---LDTFEAV-VDDMQPRRQTAIYSAIIGACRMLEP-VHATSPDTDLRVLALTDGQNNTG-APPLEALRAANRiGAVVDAIIIGD--KPDDNLRKIA--KCTGGSVFHIASLSD 314
                 789*********977777777666655555544477777777777776647*************************7...4455555.6888999***************998.58999999999************.577777777777666666666665..9999******..888******999876 PP

>> PF06707.6  Protein of unknown function (DUF1194)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.33   7.6e+02       6      22 ..     134     150 ..     100     173 .. 0.73
   2 !   17.0   0.0   8.3e-07    0.0019      89     163 ..     221     296 ..     205     307 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.33
   PF06707.6   6 LvLavDvSgSvdeeelr 22 
                  ++a+D SgS+ +   +
  MMETSP1325-20131115|5838_1 134 VAIAIDRSGSMRTGFDE 150
                 45777777777665444 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 8.3e-07
   PF06707.6  89 raaarrtaigeAlefaaallaenpve...glrrviDvSGDGpnneglepvtaardaaeakgvtingLailekeeeasa 163
                 ++ +r+tai +A+  a ++l+   ++      rv+ +  DG+nn+g++p  +a +aa++ g ++ ++ i++k +++ +
  MMETSP1325-20131115|5838_1 221 MQPRRQTAIYSAIIGACRMLEPVHATspdTDLRVLAL-TDGQNNTGAPPL-EALRAANRIGAVVDAIIIGDKPDDNLR 296
                 4455669999999999999886655411156788887.5*******9999.999999*************99887655 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   5.6e-06     0.013      50      74 ..     464     488 ..     321     512 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 5.6e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05773.17  50 sleleirlpedYPeeaPiitlsste 74 
                  + l+ir+p+dYP +aP it+++ +
  MMETSP1325-20131115|5838_1 464 VFALNIRVPQDYPFRAPHITFETVP 488
                 689******************9865 PP

>> PF05743.8  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011      0.25      52     109 ..     467     519 ..     435     529 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00011
                 EEEE--TTTTTS--EEEE-GCC--TSGGGGGB-----B--HHHHS--TTT--HHHHHH CS
   PF05743.8  52 iliwvpesyPveaPivyvkptksmvikknenvdaqGrvylpyLeeWkreksnlvslvq 109
                 + i vp++yP++aP++  +     ++  ++nv ++G + l++L++ + ++ ++ ++++
  MMETSP1325-20131115|5838_1 467 LNIRVPQDYPFRAPHITFE-----TVPYHCNVSESGAICLDILQSGWGPQLSIPKALE 519
                 5689**********99654.....677899*************985555666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.90u 0.36s 00:00:01.26 Elapsed: 00:00:00.54
# Mc/sec: 2564.99
//
Query:       MMETSP1325-20131115|5850_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   0.1       0.13   11.8   0.0    1.1  1  PF14043.1 WVELL protein
       0.14   11.3   0.0       0.23   10.6   0.0    1.3  1  PF10516.4 SHNi-TPR


Domain annotation for each model (and alignments):
>> PF14043.1  WVELL protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.8e-05      0.13      29      49 ..      13      33 ..       1      38 [. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.8e-05
   PF14043.1 29 lLWeDFettyAkagreYkGee 49
                 LW++ e+++A+a +e++Ge 
  MMETSP1325-20131115|5850_1 13 SLWNEAEAALAQAMNEFQGEG 33
                59*****************85 PP

>> PF10516.4  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   3.3e-05      0.23       7      15 ..       9      17 ..       7      18 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 3.3e-05
   PF10516.4  7 LGEiSlEnE 15
                LGEiSl+nE
  MMETSP1325-20131115|5850_1  9 LGEISLWNE 17
                9*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 283.65
//
Query:       MMETSP1325-20131115|5852_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   12.8   1.6      0.078   12.5   0.0    1.9  2  PF09340.5 Histone acetyltransferase subunit NuA4


Domain annotation for each model (and alignments):
>> PF09340.5  Histone acetyltransferase subunit NuA4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.7e-06     0.078      58      79 ..       8      29 ..       4      30 .. 0.88
   2 ?   -1.5   0.5      0.13   1.7e+03      53      53 ..      77      77 ..      52      94 .. 0.58

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.7e-06
   PF09340.5 58 aqkrkskfkeedriFSlSSvty 79
                a+ +k+k+++++r+FS SS t+
  MMETSP1325-20131115|5852_1  8 AAGQKRKMEKDNRMFSYSSWTF 29
                567899*************998 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.13
   PF09340.5 53 s 53
                +
  MMETSP1325-20131115|5852_1 77 E 77
                0 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       774  (0.0566121); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 429.54
//
Query:       MMETSP1325-20131115|5844_1  [L=436]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-41  139.5   0.0    1.9e-40  138.0   0.0    1.8  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    1.2e-06   28.4   0.0      6e-06   26.1   0.0    2.2  2  PF07724.9  AAA domain (Cdc48 subfamily)
    2.6e-05   23.8   0.0     0.0002   20.9   0.0    2.5  1  PF07728.9  AAA domain (dynein-related subfamily)
    2.6e-05   24.2   0.0    0.00037   20.4   0.0    2.4  1  PF13401.1  AAA domain
     0.0011   19.2   0.1     0.0032   17.7   0.0    1.7  2  PF13191.1  AAA ATPase domain
     0.0032   17.0   0.1     0.0059   16.2   0.1    1.4  1  PF13245.1  Part of AAA domain
     0.0043   17.7   0.3      0.016   15.8   0.0    2.2  2  PF13207.1  AAA domain
     0.0052   15.6   0.0      0.009   14.8   0.0    1.4  1  PF05673.8  Protein of unknown function (DUF815)
  ------ inclusion threshold ------
      0.014   14.3   0.0      0.026   13.4   0.0    1.4  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
      0.016   15.0   0.0      0.026   14.3   0.0    1.3  1  PF13521.1  AAA domain
      0.021   14.6   0.0      0.038   13.7   0.0    1.4  1  PF13671.1  AAA domain
      0.031   14.0   0.0      0.061   13.1   0.0    1.5  1  PF13173.1  AAA domain
      0.037   13.0   0.0      0.062   12.2   0.0    1.3  1  PF06414.7  Zeta toxin
      0.066   12.5   0.0       0.11   11.7   0.0    1.3  1  PF01695.12 IstB-like ATP binding protein
      0.083   11.9   0.0       0.18   10.8   0.0    1.4  1  PF01078.16 Magnesium chelatase, subunit ChlI
      0.085   12.9   0.0       0.18   11.8   0.0    1.6  1  PF00910.17 RNA helicase
      0.098   12.1   0.0       0.18   11.2   0.0    1.4  1  PF07726.6  ATPase family associated with various cellular activities (AAA)


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.0   0.0   2.3e-43   1.9e-40       1     130 [.     213     346 ..     213     348 .. 0.96

  Alignments for each domain:
  == domain 1    score: 138.0 bits;  conditional E-value: 2.3e-43
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH.....SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr.....sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkiei 130
                 vllyGppGtGKTl a+ava+ +++ f+++ gsel++kyvge+++ +relf+ a++k+  +i+f+DE+da+++sr     +g++++e +r++ q++teldg++ + +++ v++atnrpd+ldpallr gR+drk+e+
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKK-ACIIFFDEVDAIGGSRtsggdDGGSDNEVQRTMLQIVTELDGFDAR-GNIKVLMATNRPDTLDPALLRpGRLDRKVEF 346
                 79****************************************************998.9****************999888899999****************7.66**************************987 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.6   2.1e+03      28      51 ..      87     112 ..      30     129 .. 0.63
   2 !   26.1   0.0   7.4e-09     6e-06       6     104 ..     213     307 ..     208     323 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 2.6
                 T-....--EEEEGGG---..----TH CS
   PF07724.9  28 fvkkekkliradaselle..eeeveh 51 
                  +++e++l +a +++++   +ee++ 
  MMETSP1325-20131115|5844_1  87 MMQEEQPLQVARCTKIIDaqSEEAKY 112
                 22456666666666666553333333 PP

  == domain 2    score: 26.1 bits;  conditional E-value: 7.4e-09
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG---..----THHHHHHHHHTTT-HHHHT---EEEETGGG----.------.------HHHHHHHH- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk.essgad.vSregVqrdLLqile 104
                 +ll gp g+Gkt+ a+a+a+  ++     +ir+  sel +    e     +r   +   + + ++  i+++DE+d i  + +s g d  S ++Vqr +Lqi+ 
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAVANRTDA----CFIRVIGSELVQkyVGEG----ARMVRELFTMARSKKACIIFFDEVDAIGGSrTSGGDDgGSDNEVQRTMLQIVT 307
                 6889****************9996....999999999999222222....33344444556677788***********99745444427999*********85 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.5e-07    0.0002       1      78 [.     212     282 ..     212     336 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 2.5e-07
                 EEEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------..G-SEEEEESGGG-- CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar..egeilvlDEverae 78 
                 +vlL GppGtgK+  a+ +a ++ + +  v +++      l++++   +g +  ++      ar  +++i+++DEv+ + 
  MMETSP1325-20131115|5844_1 212 GVLLYGPPGTGKTLSARAVANRTDACFIRVIGSE------LVQKYVG-EGARMVRELFT--MARskKACIIFFDEVDAIG 282
                 59*********************98888887765......8999882.44444444444..444459*********9765 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   4.6e-07   0.00037       7      29 ..     213     235 ..     208     324 .. 0.85

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 4.6e-07
   PF13401.1   7 lvvtGesGvGKTtllrrlarqld 29 
                 ++++G++G+GKT+++r +a++ d
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAVANRTD 235
                 799*****************753 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0     4e-06    0.0032      24      51 ..     210     233 ..     200     262 .. 0.79
   2 ?   -2.8   0.0       7.8   6.3e+03     127     141 ..     264     279 ..     241     284 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 4e-06
   PF13191.1  24 p.lllvtGpsGiGKSsLlrelakpiller 51 
                 p  +l++Gp+G+GK+  +r++a     +r
  MMETSP1325-20131115|5844_1 210 PkGVLLYGPPGTGKTLSARAVA-----NR 233
                 4589****************54.....44 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 7.8
   PF13191.1 127 rtrrpk.lvlvlDDlq 141
                 ++r++k +++++D+++
  MMETSP1325-20131115|5844_1 264 MARSKKaCIIFFDEVD 279
                 3334446999999865 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   7.3e-06    0.0059      11      34 ..     212     233 ..     204     255 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 7.3e-06
   PF13245.1  11 pllvvtGgPGtGKTttlaaiiaal 34 
                 + +++ G+PGtGKT + a+++a +
  MMETSP1325-20131115|5844_1 212 G-VLLYGPPGTGKT-LSARAVANR 233
                 3.5669********.999988875 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       3.8   3.1e+03      26      64 ..      24      63 ..      16     121 .. 0.51
   2 !   15.8   0.0     2e-05     0.016       2      28 ..     213     239 ..     213     378 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 3.8
                EEEEGGGB.-.....-GGGS-B-----B--SSGGGB-HHHHHHHH CS
   PF13207.1 26 pvlslddl.l.....reeglkelddgereskdadadllaaildgl 64
                pvl+ +d+ l       ++ ++++d+e e   ++    ++ l++l
  MMETSP1325-20131115|5844_1 24 PVLDEGDIaLlktygVGPYTNKIKDTEKEI-KEH----QEKLKDL 63
                567777731234432111111222222111.222....2222222 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 2e-05
                 E--B--TT---HHHHHHHHHHSTEEEE CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvl 28 
                 ++++GppG+GK+  a+++a+r +   +
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAVANRTDACFI 239
                 789******************985443 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.1e-05     0.009      52     115 ..     209     277 ..     164     280 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.1e-05
   PF05673.8  52 pannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkdlpkivellr...erperfilfvDD 115
                 p + vLL+G  GtGK    +a+ n++ +  +r+i  e+ ++ + +  ++v++l    ++++ +i+f+D 
  MMETSP1325-20131115|5844_1 209 PPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIgsELVQKYVGEGARMVRELFtmaRSKKACIIFFDE 277
                 5678******************************77788888988888888764232778899***997 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.2e-05     0.026      52      88 ..     212     249 ..     207     282 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.2e-05
   PF05496.7  52 hvllyGpPGlGkttlakiiakelgve.lkvtsgPvlek 88 
                  vllyGpPG Gkt  a+ +a+  ++  ++v  + +++k
  MMETSP1325-20131115|5844_1 212 GVLLYGPPGTGKTLSARAVANRTDACfIRVIGSELVQK 249
                 59*******************99875255555555555 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.3e-05     0.026       2      38 ..     213     254 ..     212     273 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.3e-05
   PF13521.1   2 ivitGgpstGKTtlleaLaar....gypvv.pEvarevleek 38 
                 + + G+p+tGKT  ++a+a+r     ++v+  E + +++ e+
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAVANRtdacFIRVIgSELVQKYVGEG 254
                 6799***************99544444444444444444443 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.7e-05     0.038       2      29 ..     213     240 ..     213     274 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.7e-05
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrls 29 
                 vll G+pG+GK+  a+++++++++++++
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAVANRTDACFIR 240
                 7899***************999966654 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   7.6e-05     0.061       4      73 ..     212     281 ..     209     321 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.6e-05
   PF13173.1   4 ilvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe...llelfleklkekkkylflDEiqev 73 
                  ++++Gp ++GKt  ++ +a++      ++ +   +   +k+  +    + elf    ++k  ++f+DE+  +
  MMETSP1325-20131115|5844_1 212 GVLLYGPPGTGKTLSARAVANRTD--ACFIRVIGSELV-QKYVGEGarmVRELFTMARSKKACIIFFDEVDAI 281
                 689*************99997766..555555444422.2332221343444444434456777******877 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   7.7e-05     0.062      15      53 ..     209     246 ..     197     273 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 7.7e-05
   PF06414.7  15 kpkavllgGqpGAGKtslaellleelaagnivridaDel 53 
                  pk vll G+pG GKt  a+++ +++ +  ++r+ + el
  MMETSP1325-20131115|5844_1 209 PPKGVLLYGPPGTGKTLSARAVANRT-DACFIRVIGSEL 246
                 5999*********************9.888888877665 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00014      0.11      48      69 ..     211     232 ..     207     273 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00014
  PF01695.12  48 enlvllGpsGvGKthlAialgv 69 
                 + ++l Gp+G+GKt  A a++ 
  MMETSP1325-20131115|5844_1 211 KGVLLYGPPGTGKTLSARAVAN 232
                 6799**********87777664 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00022      0.18      25      42 ..     213     230 ..     209     234 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00022
  PF01078.16  25 lllvGppGsGKtmlakrl 42 
                 +ll+GppG+GKt+ a+++
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAV 230
                 89************9986 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00023      0.18       1      62 [.     213     265 ..     213     281 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00023
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvk 62 
                 ++lyGp+g+GK++ a+            +++d +++r   ++ +++Y g+ + ++ ++  + 
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARA---------VANRTDACFIRVIGSELVQKYVGEGARMVRELFTMA 265
                 689*************9.........345667777788888888888887777777766655 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00022      0.18       2      30 ..     213     241 ..     212     259 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00022
   PF07726.6   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vll g PG++ktl ++a+a+  d+ f r+
  MMETSP1325-20131115|5844_1 213 VLLYGPPGTGKTLSARAVANRTDACFIRV 241
                 8999*********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      390  (0.0285255); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.83u 0.34s 00:00:01.17 Elapsed: 00:00:00.55
# Mc/sec: 1899.66
//
Query:       MMETSP1325-20131115|5854_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 244.33
//
Query:       MMETSP1325-20131115|5855_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-08   31.8   0.1    4.6e-07   29.2   0.0    2.0  2  PF13833.1  EF-hand domain pair
    3.4e-06   25.8   0.1    7.7e-06   24.7   0.1    1.7  1  PF00036.27 EF hand
      1e-05   25.4   0.1     0.0091   16.0   0.0    1.7  3  PF13499.1  EF-hand domain pair
     0.0053   16.4   0.0      0.012   15.3   0.0    1.7  1  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.011   14.8   0.0      0.027   13.7   0.0    1.7  1  PF13202.1  EF hand
      0.016   15.4   1.2      0.077   13.2   0.1    2.1  2  PF00428.14 60s Acidic ribosomal protein
      0.072   12.2   0.1      0.087   11.9   0.1    1.3  1  PF00767.13 Potyvirus coat protein
      0.079   12.4   0.1      0.091   12.2   0.1    1.1  1  PF09549.5  Bpu10I restriction endonuclease


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   2.7e-10   4.6e-07      17      53 ..       6      41 ..       2      42 .. 0.91
   2 ?    0.4   0.0      0.27   4.7e+02      22      37 ..      99     114 ..      90     115 .. 0.81

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 2.7e-10
   PF13833.1 17 lglkglseeevdilfrefDtdgdGkisfeEFcvller 53
                lg+  ++++ev +++r +D+dg+G i f+EF+ l+e+
  MMETSP1325-20131115|5855_1  6 LGYT-PTDDEVMAMVRRVDADGSGEIEFNEFLPLMED 41
                4777.9*****************************97 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.27
   PF13833.1  22 lseeevdilfrefDtd 37 
                  ++e+++++++++ ++
  MMETSP1325-20131115|5855_1  99 AKKEDLETMVSHLERN 114
                 57899*****998876 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.1   4.5e-09   7.7e-06       1      27 [.      14      40 ..      14      42 .. 0.91

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 4.5e-09
                HHHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealk 27
                e++ + + +D Dg+G I+f+Ef+ +++
  MMETSP1325-20131115|5855_1 14 EVMAMVRRVDADGSGEIEFNEFLPLME 40
                68899******************9997 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   5.3e-06    0.0091      26      65 ..       3      38 ..       2      39 .. 0.85
   2 !   13.8   0.0   2.5e-05     0.043       6      43 ..      19      52 ..      14      58 .. 0.70
   3 ?   -3.7   0.0       7.3   1.3e+04      19      29 ..     101     111 ..     100     115 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 5.3e-06
   PF13499.1 26 lkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65
                l++lg+  +d+ev  +    ++++D +g+G + f+Efl +
  MMETSP1325-20131115|5855_1  3 LRGLGYTPTDDEVMAM----VRRVDADGSGEIEFNEFLPL 38
                5667777789999999....*****************865 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 2.5e-05
   PF13499.1  6 FkllDkdgdgyldkeeLlrllkhlgselsdeevrevld 43
                 ++ D dg+g ++ +e+l l+  +g    d+ + ev++
  MMETSP1325-20131115|5855_1 19 VRRVDADGSGEIEFNEFLPLMEDIG----DKTISEVIE 52
                4667777777777777777777777....777777765 PP

  == domain 3    score: -3.7 bits;  conditional E-value: 7.3
   PF13499.1  19 keeLlrllkhl 29 
                 ke+L+ +  hl
  MMETSP1325-20131115|5855_1 101 KEDLETMVSHL 111
                 57777777765 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   7.1e-06     0.012       4      27 ..      17      40 ..      14      48 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 7.1e-06
                ---GCC-------B---HHHHHHH CS
   PF13405.1  4 eaFklfDkdgdGkidaeELrdaLr 27
                +  +  D dg+G+i+++E++ ++ 
  MMETSP1325-20131115|5855_1 17 AMVRRVDADGSGEIEFNEFLPLME 40
                556789*************99987 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.6e-05     0.027       6      21 ..      20      35 ..      15      39 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.6e-05
                HHH--S----B-HHHH CS
   PF13202.1  6 rafDlNgDGkIsreEL 21
                r++D++g+G I + E+
  MMETSP1325-20131115|5855_1 20 RRVDADGSGEIEFNEF 35
                899************9 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   4.5e-05     0.077      27      60 ..      39      75 ..       9      84 .. 0.66
   2 ?    1.1   0.1      0.27   4.6e+02      62      72 ..      92     102 ..      85     112 .. 0.53

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.5e-05
  PF00428.14 27 vkalegkdikeliangsakla...aaaaaaaaaaaaa 60
                ++ + +k+i e+i++++akla   a+++a ++  aaa
  MMETSP1325-20131115|5855_1 39 MEDIGDKTISEVIEEAAAKLAfnlASVSANTSRKAAA 75
                455669*************977553333333333333 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.27
  PF00428.14  62 aaaaaeeekke 72 
                 aaa+ + +kke
  MMETSP1325-20131115|5855_1  92 AAAEDKGAKKE 102
                 22222222222 PP

>> PF00767.13  Potyvirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   5.1e-05     0.087     186     218 ..      66      98 ..      51     130 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 5.1e-05
  PF00767.13 186 eahlqmkaaalrgkqnrlFgldgnvatqeEdte 218
                  a+++ kaaa+r++++r F++ g+v+++ Ed  
  MMETSP1325-20131115|5855_1  66 SANTSRKAAAVRSHKKRDFTISGRVSAAAEDKG 98 
                 677889************************974 PP

>> PF09549.5  Bpu10I restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   5.3e-05     0.091      10      90 ..      33     108 ..      30     134 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.3e-05
   PF09549.5  10 eEFlellvkrlvkeidetvkvgkkktfsslsfli.ssigelskepeatirtKdqDfaigkevdlklsiksefekeeesevvi 90 
                 +EFl+l+     k i+e ++   +k    l f+  s + + s+++ a+  +K++Df+i+ +v++ ++ k+   k+e+ e+++
  MMETSP1325-20131115|5855_1  33 NEFLPLMEDIGDKTISEVIEEAAAK----LAFNLaSVSANTSRKAAAVRSHKKRDFTISGRVSAAAEDKGA--KKEDLETMV 108
                 5777766554444566766666666....5554415567778888777778*******9888777666655..555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       556  (0.0406671); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.57
# Mc/sec: 574.30
//
Query:       MMETSP1325-20131115|5856_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.37s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 172.54
//
Query:       MMETSP1325-20131115|5857_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.50
# Mc/sec: 230.05
//
Query:       MMETSP1325-20131115|5858_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0066   14.6  25.1     0.0089   14.2  17.4    1.2  1  PF09770.4  Topoisomerase II-associated protein PAT1
      0.007   16.5   0.0      0.012   15.7   0.0    1.3  1  PF13437.1  HlyD family secretion protein


Domain annotation for each model (and alignments):
>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2  17.4   1.3e-06    0.0089     222     292 ..      35     105 ..      17     147 .. 0.59

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.3e-06
   PF09770.4 222 qapsqapaqaplpaqlpqqlqnlq.qqqlpqlsqqmppqpvqppqqqqqqvlklpqaqppplqqlsaspqla 292
                 q ++q+++q+ + +q+ +q+++ q q+ +++++qq++pq++qpp+q+q ++ +++ +++pp+ ++++ p l+
  MMETSP1325-20131115|5858_1  35 QWQQQQQQQMLFNQQQWNQMVHPQhQHVFQPPPQQQQPQQQQPPPQHQ-HQHQHQHQHQPPTPTPTPTPPLV 105
                 122222222223444445555544234444555555555555555444.33344445555555555555554 PP

>> PF13437.1  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.8e-06     0.012      26      77 ..     137     186 ..     130     194 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.8e-06
   PF13437.1  26 plaeiiptdelkveayvpakdigkikkkgqkvtlklddgpektlegkvesis 77 
                  ++e+  +d++k++ +v a++++++ ++g +v++k d   +++  g+v+s+ 
  MMETSP1325-20131115|5858_1 137 YIVEVDEDDNVKIRMKVKAENLRRL-DVGERVEVK-DHAETTWTAGTVTSFK 186
                 57888999*****************.6********.54556799*****975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1282  (0.0937683); expected 273.4 (0.02)
Passed bias filter:                      573  (0.0419105); expected 273.4 (0.02)
Passed Vit filter:                        74  (0.00541252); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.42s 00:00:01.17 Elapsed: 00:00:00.68
# Mc/sec: 944.45
//
Query:       MMETSP1325-20131115|5863_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|5862_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.8e-32  109.7   0.0    9.4e-32  109.5   0.0    1.1  1  PF05419.7 GUN4-like


Domain annotation for each model (and alignments):
>> PF05419.7  GUN4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   0.0   6.9e-36   9.4e-32       1     131 [.      16     158 ..      16     160 .. 0.87

  Alignments for each domain:
  == domain 1    score: 109.5 bits;  conditional E-value: 6.9e-36
                 HHHHHHTT-HHHHHHHHHHHHHHH---H..CHTS--HHHHCTS-HHHHHHHHHHHHHT-------HHHHHHHHH----.......HHHHHHH----.........-----SSTTTS--STTS-----S......--HHHHHHHTSCHH CS
   PF05419.7   1 LeelLaakkwkeAdeetarlllklagre..kegwltvedieklpcedLktiDqLWvkySkgkFGfsvQkkiyeslggkseykekvlekfgdrvgWr.........kegkwlsyseltfslsapeGhlP......gvallaallsllav 131
                 L ++Laa++++eAd+ t++ l+++ag++   ++++++++++++p +dL t+++LW+kyS+gkFG+svQ+ki++++  k +     +ekf++++ W+         ++++w+  se+ ++l+a +GhlP      g++ll+ +++++ +
  MMETSP1325-20131115|5862_1  16 LATALAAGDYQEADQITRDGLIHIAGEAarARKFVYFTEVKHIPKTDLATMERLWLKYSDGKFGYSVQRKIWRTTAIKGD-----FEKFCRKIDWNrisedgeteRKRRWFGDSEFIYNLDAARGHLPltsalrGTSLLKEIFAHPLW 158
                 6789**********************987789****************************************99987744.....69********76777766655578**9****************77766666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 868.68
//
Query:       MMETSP1325-20131115|5866_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.59
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|5869_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 642.43
//
Query:       MMETSP1325-20131115|5864_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   21.8   0.3    0.00033   20.2   0.0    2.0  2  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
       0.12   11.4  15.4       0.15   11.1  10.7    1.2  1  PF09507.5  DNA polymerase subunit Cdc27
        4.2    8.0  16.9         10    6.8  11.7    1.7  1  PF10349.4  WW-domain ligand protein


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       2.5   1.1e+04      21      26 ..     148     153 ..     147     156 .. 0.65
   2 !   20.2   0.0   7.2e-08   0.00033       6      33 ..     272     300 ..     267     302 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 2.5
                 HHHHHT CS
  PF00627.26  21 kALrat 26 
                 +AL+a+
  MMETSP1325-20131115|5864_1 148 EALEAA 153
                 677776 PP

  == domain 2    score: 20.2 bits;  conditional E-value: 7.2e-08
                 HHHHHH-.---HHHHHHHHHHTTTSHHHH CS
  PF00627.26   6 iqqLreM.GfsreeakkALratnnnvErA 33 
                 +qq++   G+s++ +++ L+ +n++v++A
  MMETSP1325-20131115|5864_1 272 LQQMLSHtGASMDVCRQYLQDANYDVNQA 300
                 44444445********************9 PP

>> PF09507.5  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1  10.7   3.4e-05      0.15     190     337 ..      90     223 ..      48     273 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3.4e-05
   PF09507.5 190 etktektekktsvkaasskkkaseksnamssffkkktkekkkkkeaseskvkeeseeesekedkaeedesaesle.keedekekeftksekkrqkrlessdseeeteekekekrkrlkkmmedededeemeivpespqeeeeseesepp 337
                 e+++ek+   +++++a+ ++   +++  +  +  +  k + ++++a ++ v++ + ee++ e++a+e +++++l  ++e+e++++              + ++ee+    +++ krl+     + +d++ + + e+p +  + + s+p+
  MMETSP1325-20131115|5864_1  90 EAEAEKKR-LAAEEEAEAQR---KQAAELRRLD-AERKREAAETQAAIERVANAEREEKRREEEALEAARQAELRrQREMEENQKAASL---------AVLAAEEEGRRLEAESKRLRDLALQDAKDARHQQAKEPP-PMYQARASPPA 223
                 22222222.22233333333...3333333333.3334444446667777777778888888888888888888856666666666665.........55666666677788899**********************.99999999886 PP

>> PF10349.4  WW-domain ligand protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  11.7    0.0022        10      52     113 ..     202     262 ..     149     264 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0022
   PF10349.4  52 dpaaavleplppyeavYgaPpagygappagygappggygappagneapmagyqapPPgYegp 113
                 d+  ++ +++pp+ ++ + Pp +y+a+p++y app +y+a  + n+a +a+ + +P +Y++ 
  MMETSP1325-20131115|5864_1 202 DARHQQAKEPPPMYQARASPP-AYTAAPPSYSAPPPAYSAANPFNDAGAAEAKSSPGPYDAM 262
                 333334444444444467799.599999999999999999999999999999*******985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1745  (0.127633); expected 273.4 (0.02)
Passed bias filter:                      522  (0.0381802); expected 273.4 (0.02)
Passed Vit filter:                        81  (0.00592452); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.92u 0.39s 00:00:01.31 Elapsed: 00:00:00.56
# Mc/sec: 1369.35
//
Query:       MMETSP1325-20131115|5868_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 710.03
//
Query:       MMETSP1325-20131115|5870_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 393.00
//
Query:       MMETSP1325-20131115|5873_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 560.75
//
Query:       MMETSP1325-20131115|5871_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-12   45.8   0.0    3.1e-12   45.8   0.0    1.0  1  PF01269.12 Fibrillarin


Domain annotation for each model (and alignments):
>> PF01269.12  Fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   2.3e-16   3.1e-12     187     228 ..       2      43 ..       1      44 [. 0.96

  Alignments for each domain:
  == domain 1    score: 45.8 bits;  conditional E-value: 2.3e-16
                 S-HHHHHHHHHHHHHCTTCEEEEEEE-TTTSTTEEEEEEEE- CS
  PF01269.12 187 aepeevfkeeveklkeeklkvleqvtlepyekdhalvvgkyk 228
                 a+pe+vf++evekl++e++k++eq+tlepye+dha+vvg+y+
  MMETSP1325-20131115|5871_1   2 ATPEAVFAREVEKLQTEHFKPKEQLTLEPYERDHAVVVGTYR 43 
                 579************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.66
# Mc/sec: 181.54
//
Query:       MMETSP1325-20131115|5876_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 650.44
//
Query:       MMETSP1325-20131115|5877_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 448.21
//
Query:       MMETSP1325-20131115|5881_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.62
# Mc/sec: 251.23
//
Query:       MMETSP1325-20131115|5879_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-16   59.4   0.0    2.5e-16   59.2   0.0    1.1  1  PF00179.21 Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.058   13.1   0.0      0.058   13.1   0.0    1.2  1  PF05773.17 RWD domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.0   3.6e-20   2.5e-16      19     116 ..      47     151 ..      29     158 .. 0.85

  Alignments for each domain:
  == domain 1    score: 59.2 bits;  conditional E-value: 3.6e-20
                 EEEEE..TTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-.----B-H.GGGSTTT-...-TT--HHHHHHHHHHHHHS--TTS- CS
  PF00179.21  19 aevve..dsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvd.etGeicl.diLkeekW...spaltlesvLlsiqsllaepnpesp 116
                 a++++  d  l+ w++ i gp+gt +++ +F l++   ++YP  PP v+f+t+i H  v+ +tGe+ + d+Lk  +W   sp   +e  L++i   +++++++s 
  MMETSP1325-20131115|5879_1  47 AGLTDpeDIFLTSWSCSIIGPQGTAFDNRFFSLTVVCTDQYPRVPPVVTFQTRINHASVNqTTGELDVnDVLKPGTWeglSPQPGIEALLTKIRDSMTNSKNRSK 151
                 5555532245789***********************************************9*****9989***999844468999********999988866654 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   8.6e-06     0.058      51      77 ..      77     103 ..      27     147 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 8.6e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05773.17  51 leleirlpedYPeeaPiitlsstelsl 77 
                 ++l++ ++ +YP ++P++t+++  +  
  MMETSP1325-20131115|5879_1  77 FSLTVVCTDQYPRVPPVVTFQTRINHA 103
                 799****************99977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.67
# Mc/sec: 572.26
//
Query:       MMETSP1325-20131115|5884_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 498.83
//
Query:       MMETSP1325-20131115|5883_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-07   30.7   3.6    3.7e-07   30.0   2.3    1.5  2  PF12678.2  RING-H2 zinc finger
    7.4e-06   25.4  10.7    1.4e-05   24.6   7.4    1.6  1  PF13639.1  Ring finger domain
     0.0031   17.1   9.2       0.01   15.5   6.5    1.8  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.026   14.2   3.4      0.026   14.2   2.4    1.5  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
      0.034   13.6   0.4      0.067   12.6   0.3    1.5  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
        0.1   12.1   7.1       0.25   10.9   4.9    1.7  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
        0.1   11.7   1.8        1.7    7.8   0.1    2.6  2  PF13248.1  zinc-ribbon domain
       0.67    9.5   7.5        2.8    7.5   5.2    1.9  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
        1.1    9.1   3.9         24    4.8   2.7    2.3  1  PF12660.2  Putative zinc-finger of transcription factor IIIC complex
        2.4    8.0  10.7        2.2    8.2   5.4    2.3  2  PF11793.3  FANCL C-terminal domain


Domain annotation for each model (and alignments):
>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       7.2   9.8e+03      15      31 ..      23      39 ..      17      48 .. 0.61
   2 !   30.0   2.3   2.7e-10   3.7e-07      10      75 .]      62     134 ..      55     134 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 7.2
   PF12678.2 15 wdisednCaiCrnelee 31
                +d+ +++ +i r++ e 
  MMETSP1325-20131115|5883_1 23 IDAHQEKRMIEREQAEA 39
                55556666666666654 PP

  == domain 2    score: 30.0 bits;  conditional E-value: 2.7e-10
   PF12678.2  10 valwkwdisednCaiCrneleelcp.eckapg..ksde.cpvawgeCgHaFHlhCiskWlktrk...tCPlcr 75 
                 v++++ +++e+ C  C +++  + p + ka+   ks+     + + CgH FH++C+ +Wl++     +CP c+
  MMETSP1325-20131115|5883_1  62 VSSFAARLPEESCQACGKAVLPADPnTTKAKTlaKSNHpERPMRVFCGHWFHHCCLDEWLRNPPfirSCPACE 134
                 566677889999****999955555144555587333334445678**************9998999****95 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   7.4     1e-08   1.4e-05      13      45 ..     100     135 ..      72     136 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 1e-08
   PF13639.1  13 geevvrlpCgHvfHeeCldewlrss...nsCPlCrk 45 
                  e+++r  CgH fH  Cldewlr+    +sCP C +
  MMETSP1325-20131115|5883_1 100 PERPMRVFCGHWFHHCCLDEWLRNPpfiRSCPACER 135
                 68899999***************864445*****86 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   6.5   7.6e-06      0.01      14      45 ..      98     134 ..      70     135 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 7.6e-06
   PF13923.1  14 n....pviltpCgHlyCkkCieqwleks..kkkCPiCr 45 
                 n    p+    CgH ++  C+++wl++    ++CP C+
  MMETSP1325-20131115|5883_1  98 NhperPMR-VFCGHWFHHCCLDEWLRNPpfIRSCPACE 134
                 05554754.78****************666669****8 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.4   1.9e-05     0.026      52      80 ..     108     136 ..     101     141 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.9e-05
   PF12861.2  52 ckhnfhlhcilkwletetskglcpmcrqt 80 
                 c h fh+ c+ +wl ++     cp c + 
  MMETSP1325-20131115|5883_1 108 CGHWFHHCCLDEWLRNPPFIRSCPACERR 136
                 *************************9654 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.3   4.9e-05     0.067      24      57 ..     101     131 ..      89     132 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.9e-05
                 ..EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
   PF13445.1  24 npPvvLpCGhvisrealeklakggrsnkgrfkCP 57 
                 + P++  CGh +   +l +++++     + + CP
  MMETSP1325-20131115|5883_1 101 ERPMRVFCGHWFHHCCLDEWLRN---PPFIRSCP 131
                 45*******************94...45788887 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   4.9   0.00018      0.25      13      41 .]     104     133 ..      74     133 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00018
                 .BSCTS-EE-CHHHHHHHCS.T-----TTT CS
  PF00097.20  13 elleCkHsfCskCirkilks.rkkvkCPlC 41 
                 +   C+H f++ C++++l++    ++CP C
  MMETSP1325-20131115|5883_1 104 MRVFCGHWFHHCCLDEWLRNpPFIRSCPAC 133
                 4677***************8767778***9 PP

>> PF13248.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1    0.0013       1.7       4      16 ..      73      91 ..      71     110 .. 0.66
   2 ?    2.5   0.1     0.057        78       4       9 ..     129     134 ..     128     140 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0013
   PF13248.1  4 tCPnCGa.vlevd.....a 16
                 C +CG+ vl++d     a
  MMETSP1325-20131115|5883_1 73 SCQACGKaVLPADpnttkA 91
                5******889988555551 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.057
   PF13248.1   4 tCPnCG 9  
                  CP+C 
  MMETSP1325-20131115|5883_1 129 SCPACE 134
                 599995 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   5.2     0.002       2.8      12      47 ..     100     137 ..      70     139 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.002
   PF13920.1  12 eadvlllpCgHlclCeeCaerllk...rkkkCpiCrspi 47 
                 +++ + + CgH  + + C +++l+     ++Cp C + i
  MMETSP1325-20131115|5883_1 100 PERPMRVFCGHW-FHHCCLDEWLRnppFIRSCPACERRI 137
                 44566677****.**********999999******9987 PP

>> PF12660.2  Putative zinc-finger of transcription factor IIIC complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   2.7     0.017        24      37      70 ..     109     142 ..      61     166 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.017
   PF12660.2  37 GHvwaRCaltflaiqepkvkvCsvcssevlseel 70 
                 GH ++ C+l   +   p ++ C  c++++ + e 
  MMETSP1325-20131115|5883_1 109 GHWFHHCCLDEWLRNPPFIRSCPACERRIWHPEW 142
                 99*******9998888888******999887765 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       5.8     8e+03      19      24 ..      70      75 ..      65      81 .. 0.58
   2 ?    8.2   5.4    0.0016       2.2      28      45 ..     108     125 ..      97     139 .. 0.85

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 5.8
                --B--S CS
   PF11793.3 19 pdisCd 24
                p+ sC+
  MMETSP1325-20131115|5883_1 70 PEESCQ 75
                555664 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0016
                 ----B-SGGGHHHHHHHH CS
   PF11793.3  28 CnkkfHaaCLkeWlrslk 45 
                 C++ fH+ CL eWlr+ +
  MMETSP1325-20131115|5883_1 108 CGHWFHHCCLDEWLRNPP 125
                 9*************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       634  (0.0463721); expected 273.4 (0.02)
Passed bias filter:                      435  (0.0318169); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 745.05
//
Query:       MMETSP1325-20131115|5885_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   14.2   0.0       0.02   13.9   0.0    1.1  1  PF04222.7 Protein of unknown function (DUF416)


Domain annotation for each model (and alignments):
>> PF04222.7  Protein of unknown function (DUF416)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.4e-06      0.02      63     132 ..      47     117 ..      37     120 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.4e-06
   PF04222.7  63 infekqlekleeiiPdved..fdiygvypAlDacvalsellhsllaeeeleeaveisklslatVaklielqe 132
                 ++++      ++  ++++d  fd+ gv +  +a+ a + +lh++ ++e  ++ +e+ k+s  t+ +li++++
  MMETSP1325-20131115|5885_1  47 LDIAPNASHCDAHRHNATDglFDSSGVATGNSAAAAWEGALHNISSRER-NTNFEVTKVSDYTILALINANS 117
                 5556666666777777777789********************9999988.7****************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       561  (0.0410328); expected 273.4 (0.02)
Passed bias filter:                      497  (0.0363517); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 677.23
//
Query:       MMETSP1325-20131115|5887_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.41s 00:00:00.67 Elapsed: 00:00:00.55
# Mc/sec: 165.57
//
Query:       MMETSP1325-20131115|5889_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.44s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 488.86
//
Query:       MMETSP1325-20131115|5890_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.63
# Mc/sec: 334.73
//
Query:       MMETSP1325-20131115|5888_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-34  117.8   0.6    1.4e-12   47.0   0.0    3.2  3  PF13855.1  Leucine rich repeat
    2.3e-17   62.7   0.0      2e-09   37.1   0.0    2.0  2  PF13306.1  Leucine rich repeats (6 copies)
      6e-16   57.5   0.1    4.4e-05   22.8   0.0    4.2  4  PF12799.2  Leucine Rich repeats (2 copies)
    6.9e-11   40.5   0.0        3.1    8.0   0.0    6.4  7  PF00560.28 Leucine Rich Repeat
    8.9e-09   34.0   0.5        5.5    7.5   0.0    6.4  7  PF13504.1  Leucine rich repeat
    5.3e-06   25.8   3.0        6.2    7.1   0.0    6.0  6  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
      0.084   13.2   0.9         65    4.1   0.0    4.1  4  PF07723.8  Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   7.5e-14   1.5e-10       6      61 .]       1      56 [.       1      56 [. 0.98
   2 !   39.9   0.0   1.1e-13   2.2e-10       2      61 .]      45     106 ..      44     106 .. 0.96
   3 !   47.0   0.0     7e-16   1.4e-12       2      61 .]      95     154 ..      94     154 .. 0.98

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 7.5e-14
   PF13855.1  6 LdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                LdL  N+++ i+ ga +gl++L  L L +n +++i  ++f+gL sL+ L L++N++
  MMETSP1325-20131115|5888_1  1 LDLMENDITGIESGAWEGLESLAWLHLAYNGISTIKNGTFDGLGSLETLQLDYNDI 56
                899***************************************************97 PP

  == domain 2    score: 39.9 bits;  conditional E-value: 1.1e-13
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLs..gnnlksispeafkgLpsLreLnLsgNrl 61 
                 +L++L+L+ N+++ i+ gaF+gl++L ++ +   +nn ++i+++a +gL sL+ L L ++++
  MMETSP1325-20131115|5888_1  45 SLETLQLDYNDIQAIERGAFGGLDSLVYFAFEgsCNNMTTIESGAWDGLGSLKTLILANSDI 106
                 79*****************************8779**********************99876 PP

  == domain 3    score: 47.0 bits;  conditional E-value: 7e-16
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 +Lk+L+L n+++ +i  g+F gl++L++L L gn ++s++++a +gL sL++L+++gN+l
  MMETSP1325-20131115|5888_1  95 SLKTLILANSDILTIKSGTFDGLDSLRTLWLFGNGITSVESGAWDGLGSLKYLYFWGNKL 154
                 79********************************************************98 PP

>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0     1e-12     2e-09      20     122 ..       5     114 ..       3     115 .. 0.88
   2 !   30.2   0.0   1.3e-10   2.6e-07      14     111 ..      46     150 ..      45     158 .. 0.85

  Alignments for each domain:
  == domain 1    score: 37.1 bits;  conditional E-value: 1e-12
   PF13306.1  20 pssvtsIgeyaFsncsslksitlpss.lteigeyaFsncssltsitip.ssltsigenaFsncsslksinip...sslttigssaFsnc.slksitips.svteigsnaF 122
                 ++ +t I++ a ++ +sl  ++l  + +++i++  F++  sl+++++  ++++ i+  aF + +sl  + ++   +++tti+s a  +  slk++++ + ++ +i+s +F
  MMETSP1325-20131115|5888_1   5 ENDITGIESGAWEGLESLAWLHLAYNgISTIKNGTFDGLGSLETLQLDyNDIQAIERGAFGGLDSLVYFAFEgscNNMTTIESGAWDGLgSLKTLILANsDILTIKSGTF 114
                 678999****************97655********************8369********************72225799*********99****9988548889998888 PP

  == domain 2    score: 30.2 bits;  conditional E-value: 1.3e-10
   PF13306.1  14 ltsitip.ssvtsIgeyaFsncsslksitl...psslteigeyaFsncssltsitips.sltsigenaFsncsslksini.psslttigssaFsnc.slksitip 111
                 l+++++  + ++ I+  aF +  sl  + +    +++t+i++ a ++  sl+++ + + ++ +i++ +F + +sl+++ +  + +t+++s a  +  slk++ + 
  MMETSP1325-20131115|5888_1  46 LETLQLDyNDIQAIERGAFGGLDSLVYFAFegsCNNMTTIESGAWDGLGSLKTLILANsDILTIKSGTFDGLDSLRTLWLfGNGITSVESGAWDGLgSLKYLYFW 150
                 566666646799*****************9333357********************7658*****************9972556***********999*999876 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.2e-06    0.0042       6      40 ..       1      36 [.       1      41 [. 0.91
   2 !    8.4   0.0   0.00077       1.5       2      28 ..      45      72 ..      45      87 .. 0.85
   3 !   22.8   0.0   2.2e-08   4.4e-05       2      40 ..      95     134 ..      95     139 .. 0.92
   4 ?    4.4   0.0     0.014        27       3      13 ..     144     154 ..     143     165 .. 0.54

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.2e-06
   PF12799.2  6 LdLsnNnIkdlppe.lanLpnLktLnLsnNpisdls 40
                LdL +N I+ ++     +L +L  L+L++N is ++
  MMETSP1325-20131115|5888_1  1 LDLMENDITGIESGaWEGLESLAWLHLAYNGISTIK 36
                9********9987549*****************987 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00077
   PF12799.2  2 nLevLdLsnNnIkdlppe.lanLpnLkt 28
                +Le+L L +N I+ ++   +++L +L +
  MMETSP1325-20131115|5888_1 45 SLETLQLDYNDIQAIERGaFGGLDSLVY 72
                69*************9644999998875 PP

  == domain 3    score: 22.8 bits;  conditional E-value: 2.2e-08
   PF12799.2   2 nLevLdLsnNnIkdlpp.elanLpnLktLnLsnNpisdls 40 
                 +L++L L+n+ I  ++  ++ +L +L+tL+L +N i++++
  MMETSP1325-20131115|5888_1  95 SLKTLILANSDILTIKSgTFDGLDSLRTLWLFGNGITSVE 134
                 69*************8768******************987 PP

  == domain 4    score: 4.4 bits;  conditional E-value: 0.014
   PF12799.2   3 LevLdLsnNnI 13 
                 L++L++ +N++
  MMETSP1325-20131115|5888_1 144 LKYLYFWGNKL 154
                 66666666665 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.5   2.9e+03       5      20 ..       1      17 [.       1      19 [. 0.76
   2 !    5.8   0.0    0.0082        16       2      22 .]      22      43 ..      21      43 .. 0.88
   3 !    7.8   0.0    0.0018       3.6       1      22 []      45      67 ..      45      67 .. 0.92
   4 ?    0.5   0.0      0.47   9.1e+02       8      19 ..      78      90 ..      78      93 .. 0.77
   5 ?    2.1   0.0      0.14   2.7e+02       1      22 []      95     117 ..      95     117 .. 0.86
   6 !    8.0   0.0    0.0016       3.1       1      18 [.     119     136 ..     119     141 .. 0.83
   7 !    6.8   0.0    0.0039       7.6       1      16 [.     143     164 ..     143     168 .. 0.71

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 1.5
                EEETSSBCBCHHHH.HH CS
  PF00560.28  5 LdLsgNnltslpps.ls 20
                LdL  N +t + ++  +
  MMETSP1325-20131115|5888_1  1 LDLMENDITGIESGaWE 17
                89999999988776555 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0082
                ESEEEETSSBCBCHHHH.HHHH CS
  PF00560.28  2 LeeLdLsgNnltslpps.lsnL 22
                L  L+L +N ++++ ++ + +L
  MMETSP1325-20131115|5888_1 22 LAWLHLAYNGISTIKNGtFDGL 43
                778***********99999876 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0018
                TESEEEETSSBCBCHHHH.HHHH CS
  PF00560.28  1 nLeeLdLsgNnltslpps.lsnL 22
                +Le+L L++N ++ +  + +++L
  MMETSP1325-20131115|5888_1 45 SLETLQLDYNDIQAIERGaFGGL 67
                79*************99999887 PP

  == domain 4    score: 0.5 bits;  conditional E-value: 0.47
                TSSBCBCHHHH.H CS
  PF00560.28  8 sgNnltslpps.l 19
                s+Nn+t++ ++  
  MMETSP1325-20131115|5888_1 78 SCNNMTTIESGaW 90
                789****998755 PP

  == domain 5    score: 2.1 bits;  conditional E-value: 0.14
                 TESEEEETSSBCBCHHHH.HHHH CS
  PF00560.28   1 nLeeLdLsgNnltslpps.lsnL 22 
                 +L++L L +  + ++ ++ + +L
  MMETSP1325-20131115|5888_1  95 SLKTLILANSDILTIKSGtFDGL 117
                 69********9999988888776 PP

  == domain 6    score: 8.0 bits;  conditional E-value: 0.0016
                 TESEEEETSSBCBCHHHH CS
  PF00560.28   1 nLeeLdLsgNnltslpps 18 
                 +L++L L gN +ts+ ++
  MMETSP1325-20131115|5888_1 119 SLRTLWLFGNGITSVESG 136
                 79***********98876 PP

  == domain 7    score: 6.8 bits;  conditional E-value: 0.0039
                 TESEEEETSS.BCBC.....HH CS
  PF00560.28   1 nLeeLdLsgN.nlts.....lp 16 
                 +L++L++ gN  ++s     lp
  MMETSP1325-20131115|5888_1 143 SLKYLYFWGNkLICSdveasLP 164
                 79********555545555555 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.29   5.6e+02       6      16 ..       1      11 [.       1      12 [. 0.89
   2 ?    2.3   0.0      0.14   2.8e+02       2      16 ..      21      35 ..      20      36 .. 0.83
   3 ?    4.4   0.0      0.03        58       1      15 [.      44      58 ..      44      60 .. 0.85
   4 ?   -2.5   0.0       5.7   1.1e+04       9      15 ..      78      84 ..      67      85 .. 0.69
   5 ?    3.1   0.0     0.081   1.6e+02       1      14 [.      94     108 ..      94     112 .. 0.83
   6 !    7.5   0.0    0.0028       5.5       2      15 ..     119     132 ..     118     134 .. 0.91
   7 !    6.5   0.0     0.006        12       1      13 [.     142     154 ..     142     164 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.29
   PF13504.1  6 LdLsgnrLtsL 16
                LdL+ n++t +
  MMETSP1325-20131115|5888_1  1 LDLMENDITGI 11
                9******9976 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.14
   PF13504.1  2 nLkeLdLsgnrLtsL 16
                +L  L+L++n++ ++
  MMETSP1325-20131115|5888_1 21 SLAWLHLAYNGISTI 35
                57779******9876 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.03
   PF13504.1  1 pnLkeLdLsgnrLts 15
                ++L++L L +n+++ 
  MMETSP1325-20131115|5888_1 44 GSLETLQLDYNDIQA 58
                58*********9875 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 5.7
   PF13504.1  9 sgnrLts 15
                s+n+ t+
  MMETSP1325-20131115|5888_1 78 SCNNMTT 84
                5677776 PP

  == domain 5    score: 3.1 bits;  conditional E-value: 0.081
   PF13504.1   1 pnLkeLdLsgnr.Lt 14 
                 ++Lk+L L++ + Lt
  MMETSP1325-20131115|5888_1  94 GSLKTLILANSDiLT 108
                 58*******998554 PP

  == domain 6    score: 7.5 bits;  conditional E-value: 0.0028
   PF13504.1   2 nLkeLdLsgnrLts 15 
                 +L++L L gn++ts
  MMETSP1325-20131115|5888_1 119 SLRTLWLFGNGITS 132
                 7***********98 PP

  == domain 7    score: 6.5 bits;  conditional E-value: 0.006
   PF13504.1   1 pnLkeLdLsgnrL 13 
                 ++Lk+L+ +gn+L
  MMETSP1325-20131115|5888_1 142 GSLKYLYFWGNKL 154
                 58*********97 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0       0.1     2e+02       7      17 ..       1      11 [.       1      23 [. 0.70
   2 !    5.8   0.0    0.0081        16       3      16 ..      21      34 ..      19      38 .. 0.85
   3 !    7.1   0.0    0.0032       6.2       3      14 ..      45      56 ..      43      65 .. 0.88
   4 ?    1.2   0.1      0.26     5e+02       3      14 ..      95     106 ..      93     112 .. 0.84
   5 ?    2.5   0.0     0.092   1.8e+02       3      16 ..     119     132 ..     117     138 .. 0.87
   6 ?    1.0   0.0      0.28   5.6e+02       3      14 ..     143     154 ..     141     162 .. 0.79

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.1
   PF13516.1  7 LdLsnNqigde 17
                LdL  N+i+++
  MMETSP1325-20131115|5888_1  1 LDLMENDITGI 11
                89******983 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0081
   PF13516.1  3 nLtsLdLsnNqigd 16
                +L +L+L +N+i+ 
  MMETSP1325-20131115|5888_1 21 SLAWLHLAYNGIST 34
                7889********86 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0032
   PF13516.1  3 nLtsLdLsnNqi 14
                +L++L+L +N+i
  MMETSP1325-20131115|5888_1 45 SLETLQLDYNDI 56
                8*********99 PP

  == domain 4    score: 1.2 bits;  conditional E-value: 0.26
   PF13516.1   3 nLtsLdLsnNqi 14 
                 +L++L L n +i
  MMETSP1325-20131115|5888_1  95 SLKTLILANSDI 106
                 8******99887 PP

  == domain 5    score: 2.5 bits;  conditional E-value: 0.092
   PF13516.1   3 nLtsLdLsnNqigd 16 
                 +L++L L +N+i++
  MMETSP1325-20131115|5888_1 119 SLRTLWLFGNGITS 132
                 79**********97 PP

  == domain 6    score: 1.0 bits;  conditional E-value: 0.28
   PF13516.1   3 nLtsLdLsnNqi 14 
                 +L++L + +N++
  MMETSP1325-20131115|5888_1 143 SLKYLYFWGNKL 154
                 89*****99995 PP

>> PF07723.8  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.033        65       1      12 [.      45      56 ..      45      65 .. 0.88
   2 ?   -2.7   0.0       4.6   8.9e+03       7      14 ..      67      74 ..      67      80 .. 0.57
   3 ?    2.8   0.6     0.086   1.7e+02       1       9 [.      95     103 ..      95     123 .. 0.73
   4 ?    0.9   0.0      0.36   6.9e+02       1      12 [.     119     130 ..     119     135 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.033
   PF07723.8  1 sLKtLhLdsvdf 12
                sL tL Ld++d+
  MMETSP1325-20131115|5888_1 45 SLETLQLDYNDI 56
                89******9987 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 4.6
   PF07723.8  7 Ldsvdfdd 14
                Lds +++ 
  MMETSP1325-20131115|5888_1 67 LDSLVYFA 74
                77877743 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.086
   PF07723.8   1 sLKtLhLds 9  
                 sLKtL L  
  MMETSP1325-20131115|5888_1  95 SLKTLILAN 103
                 899999955 PP

  == domain 4    score: 0.9 bits;  conditional E-value: 0.36
   PF07723.8   1 sLKtLhLdsvdf 12 
                 sL+tL L  + +
  MMETSP1325-20131115|5888_1 119 SLRTLWLFGNGI 130
                 89***9977655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 772.16
//
Query:       MMETSP1325-20131115|5891_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-12   45.6   0.1    1.6e-11   44.4   0.0    1.6  2  PF13640.1  2OG-Fe(II) oxygenase superfamily
    4.8e-11   42.7   0.0    1.9e-10   40.8   0.0    1.8  2  PF03171.15 2OG-Fe(II) oxygenase superfamily
      0.001   18.5   0.0     0.0019   17.6   0.0    1.4  1  PF13661.1  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         1   4.8e+03      89     100 .]       3      14 ..       2      14 .. 0.84
   2 !   44.4   0.0   3.5e-15   1.6e-11       2      99 ..      49     146 ..      48     147 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1
   PF13640.1  89 qgrrlaitgwft 100
                 +++r +++gw+t
  MMETSP1325-20131115|5891_1   3 SRTRTSLNGWLT 14 
                 589*******85 PP

  == domain 2    score: 44.4 bits;  conditional E-value: 3.5e-15
   PF13640.1   2 qlnrygpggflspHvDnse...sssrrltlllylndpeweeeGGelelypsdrsegvakevedeevvpkpgrlvlFks........drslHrvtpvgaqgrrlaitgwf 99 
                 q+ ry++++++ pH+D+s     ++r lt+lly+++pe   eGG + + +   ++g+   v+     p +g+ vlF+s        d slH+ +pv  +g +++ + w+
  MMETSP1325-20131115|5891_1  49 QVVRYQKNQEYQPHHDFSDqgrPEQRFLTFLLYISPPE---EGGYTSFPKA--NGGRGLRVK-----PPKGSGVLFYSmrpdgngdDLSLHAGEPV-RKGVKWICNLWV 146
                 899**************99**99************999...*******976..788888888.....******************999********.999****99996 PP

>> PF03171.15  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.51   2.3e+03      88      98 ..       4      14 ..       2      15 .. 0.84
   2 !   40.8   0.0   4.1e-14   1.9e-10       2      97 ..      45     146 ..      44     147 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.51
                SEEEEEEEEEE CS
  PF03171.15 88 geRislafflr 98
                ++R+sl+ +l+
  MMETSP1325-20131115|5891_1  4 RTRTSLNGWLT 14
                79*******86 PP

  == domain 2    score: 40.8 bits;  conditional E-value: 4.1e-14
                 -SEEEEEEEES--E-EEEEEEEESS......SCEEEEEEE....T--EEEEEE-EESCECECTSTT.EEEEEEEEHHCCCE---GTT-EEEE----CSEEEEEEEEE CS
  PF03171.15   2 peqlrvnrYpppekglglgpHtDne......nriltillq....ddggglqfrkedkwidvppdpv.allvnfgdvllvltngryksvlHrvlpntrgeRislaffl 97 
                 +e+l+v rY    k++ ++pH+D++      +r+lt+ll+    ++gg + f+k +     +++p  +  v f++  +   ++ +  +lH++ p+++g ++++++++
  MMETSP1325-20131115|5891_1  45 AEELQVVRYQ---KNQEYQPHHDFSdqgrpeQRFLTFLLYisppEEGGYTSFPKANGGRGLRVKPPkGSGVLFYS--MRPDGNGDDLSLHAGEPVRKGVKWICNLWV 146
                 689*******...*******************************************7777777777789999999..567*************************96 PP

>> PF13661.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.1e-07    0.0019      11      63 ..      46      94 ..      38      98 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 4.1e-07
   PF13661.1 11 hrfaltratrgdffdpHiDadpsqlgkprflsallYLNedwdadfdGgtlffd 63
                ++ +  r+ +++++ pH D    + + +rfl++llY +   ++++ Gg + f 
  MMETSP1325-20131115|5891_1 46 EELQVVRYQKNQEYQPHHDFSDQGRPEQRFLTFLLYIS---PPEE-GGYTSFP 94
                556668999**********999888*************...5555.7777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 876.96
//
Query:       MMETSP1325-20131115|5895_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 333.78
//
Query:       MMETSP1325-20131115|5894_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-22   79.0   0.0    3.6e-22   78.6   0.0    1.1  1  PF00069.20 Protein kinase domain
    1.5e-07   30.7   0.0    2.3e-07   30.0   0.0    1.3  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.6   0.0   5.3e-26   3.6e-22      56     257 ..       2     238 ..       1     239 [. 0.85

  Alignments for each domain:
  == domain 1    score: 78.6 bits;  conditional E-value: 5.3e-26
                 H-TTB--EEEEEEESTEEEEEEE--SC-...EHHHHHHHHCCB....-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E...........EE------EEE...CEESS-CSS----GGGS-HHHHH.TSHHHHHHHHHHHHHHHHHHHHC---TTTST.............HHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTS CS
  PF00069.20  56 sHpnivkllevfeekdelylvleyvegg...dlfdllkkegkl....seeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel...........kiaDFGlakkl...eksseklttlvgtreYmAPEvll.kakeytkkvDvWslGvilyelltgklpfsge.............seedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkh 257
                 +Hpni+ + ++ ++++++ylv+  + +    d  dll+++  l     +  + ++++ +l++l++lH +g++Hr +K+eN+L++ ++                 FGl+  +     +  + t  vg++ ++ PEv+      ++ k+DvW+++++l el++g+  f+ e                d++  + + l++k+   ++  +++++++  + ++ l   p++R+ta+e+l++
  MMETSP1325-20131115|5894_1   2 RHPNILYVDHALHSEQHVYLVMARIGQRgraDALDLLANSADLrnssADSIVLEVVTPVLSALSHLHARGFAHRNVKTENVLVEYREPAdxleqsagderAAHWFGLCSSAvaaLDPALTDTRPVGSPGFIDPEVMVrPVIADKVKSDVWGCACVLLELVKGRQWFRLEwldifreywprdvLALDNHVQFTNLLDPKIADVYSACQTTQPRAAAVFRNALLLVPNARMTAAELLNE 238
                 7**********************99988677777778877777222244444555666789***********************7777789***9999988888****9989877777788999***********65256778899*****************88887778888888887777778888888888888888888888889***********************9985 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   3.4e-11   2.3e-07      59     201 ..       2     163 ..       1     220 [. 0.79

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 3.4e-11
                 -BTTB--BEEEBESSSSEEEEEE---B-...-HHHHHHHT..GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...........TTEEEE-----CEES.TTTSCEEESTT-EECGGGS-HHHHHHSE..EEHHHHHHH---HHHHHHTT CS
  PF07714.12  59 khpnivkllgvctkeepllivteyvkgG...dLlefLrkk..ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee...........ekvvkisDfGLardi.ekddyykkkeeaklpvkWmapEslkekk..ftsksDvWsfGvllwEiftl 201
                 +hpni+ +  +  +e+++++v+  + +    d l++L ++   +++   + +l++++ + +++++L+++ + Hr++ + NvL+e            ++      fGL+++     d   ++++   +  ++ pE++ + +   ++ksDvW   ++l E+++ 
  MMETSP1325-20131115|5894_1   2 RHPNILYVDHALHSEQHVYLVMARIGQRgraDALDLLANSadLRNSSADSIVLEVVTPVLSALSHLHARGFAHRNVKTENVLVEYrepadxleqsaGDERAAHWFGLCSSAvAALDPALTDTRPVGSPGFIDPEVMVRPViaDKVKSDVWGCACVLLELVKG 163
                 79**********99999****99875433667778888773223334444589999****************************88899999888755666678****998445556677777778999********999444689*************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1223.14
//
Query:       MMETSP1325-20131115|5893_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-52  176.0   6.5    7.4e-52  175.7   4.5    1.1  1  PF01987.12 Mitochondrial biogenesis AIM24
  ------ inclusion threshold ------
      0.034   13.6   0.1      0.048   13.1   0.1    1.2  1  PF12328.3  Rpp20 subunit of nuclear RNase MRP and P


Domain annotation for each model (and alignments):
>> PF01987.12  Mitochondrial biogenesis AIM24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.7   4.5   1.1e-55   7.4e-52       2     213 ..      74     281 ..      73     283 .. 0.96

  Alignments for each domain:
  == domain 1    score: 175.7 bits;  conditional E-value: 1.1e-55
                 EE-SS-SS--EEEE------EEEE---EEEE-TTEEEE-TT----.--------TTT----TTEEEEE..E.-----EEE--S----EEEE-----..-EEEE---EEEE----EEEEEE-.------------EEEEEE----EEEE----EEEE---.---EEEEGGGEEEEETTSEEEEE----....-TTT-------EE.EEE----EEEES CS
  PF01987.12   2 eielgdnasllevtLkpgeevyaeaGamvamsgkvefetklstgglggllkalkralggeslfqteft..aatgpgevllapsspgdisvleLdgg.eallvqkgaflaaspgvqldlsfa.glgkglfggeglfltkltGrGlvalssyGaivelelaegeelvvdpghvvAwsgtlnyevekvkgslsglksalfsGeglfl.eftGpGkVllqs 213
                 +ie g +++++ v+L pg+ + ae+G +++ms+ ve++t++    +gg++ ++ r ++g s+f++ f+   ++g+g+v+l+++ p +i+ l++++   +l++qkgafla s+++++++ f  ++++g+fggeg++l+kltG+G+ ++++ Ga++ +el+ ge+l+v  g +vA++g+++y+ve + +   g+k+ +f+Geglf+ ++tGpG+V+lq 
  MMETSP1325-20131115|5893_1  74 KIE-GGDSQIVVVDLLPGQALRAESGNLIYMSEGVEMDTSA----TGGISAGFARYMAGGSVFLSSFRytGESGSGTVALGTDVPSKIMKLNVNDYeGGLMAQKGAFLAGSDTIDIEMGFSkSFTAGFFGGEGFVLQKLTGEGDCFVKATGALINKELKVGEKLRVTSGSIVAFEGSVEYDVEMQ-K---GMKNVVFGGEGLFItTLTGPGRVYLQG 281
                 577.779********************************55....345*******************9988889*******************998889**************************************************************************************.5...5************************95 PP

>> PF12328.3  Rpp20 subunit of nuclear RNase MRP and P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   7.1e-06     0.048      62      87 ..     211     236 ..     202     260 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.1e-06
   PF12328.3  62 eeVvvkatGraiekalsvgrwFqree 87 
                  + +vkatG+ i+k l+vg+++   +
  MMETSP1325-20131115|5893_1 211 GDCFVKATGALINKELKVGEKLRVTS 236
                 5789***************9985543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.63
# Mc/sec: 1087.87
//
Query:       MMETSP1325-20131115|5896_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00021   20.9   4.7       0.98    9.1   0.1    3.6  4  PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
  ------ inclusion threshold ------
       0.17   11.4   1.3        1.6    8.2   0.0    2.9  3  PF09465.5  Lamin-B receptor of TUDOR domain
        1.3    7.2  42.3        1.9    6.7  29.3    1.1  1  PF10243.4  Microtubule-binding protein MIP-T3
        3.6    6.6  26.4        5.2    6.0  18.3    1.2  1  PF04502.8  Family of unknown function (DUF572)
        5.3    5.4   9.2        6.5    5.1   6.4    1.2  1  PF04499.10 SIT4 phosphatase-associated protein


Domain annotation for each model (and alignments):
>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0      0.02        55      12      41 ..     155     184 ..     143     194 .. 0.79
   2 !    8.5   0.0   0.00057       1.5      17      44 ..     222     249 ..     210     275 .. 0.81
   3 ?   -3.6   0.0       3.1   8.6e+03      24      42 ..     288     307 ..     284     310 .. 0.71
   4 !    9.1   0.1   0.00036      0.98      15      44 ..     337     366 ..     328     373 .. 0.84

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.02
                 E-ST---BB---EEEE-----EEEE----- CS
   PF09038.5  12 kwssngyfysgkitkdagegkykllfddgy 41 
                 +      +y g+i +   +  + + +ddg 
  MMETSP1325-20131115|5896_1 155 RHGGGAQYYPGRIARAHPNNTFDIDYDDGD 184
                 45556689********************95 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00057
                 --BB---EEEE-----EEEE-----EEE CS
   PF09038.5  17 gyfysgkitkdagegkykllfddgyecd 44 
                  ++y gki +   +g + + +ddg e  
  MMETSP1325-20131115|5896_1 222 PHYYPGKIARAHPDGTFDIAYDDGDEES 249
                 579*********************8754 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 3.1
                 EEEE-----EEEE----.-E CS
   PF09038.5  24 itkdagegkykllfddg.ye 42 
                 i   +g   y++ +ddg ye
  MMETSP1325-20131115|5896_1 288 IDGCTGPDLYNIAYDDGdYE 307
                 55556777899999998455 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.00036
                 T---BB---EEEE-----EEEE-----EEE CS
   PF09038.5  15 sngyfysgkitkdagegkykllfddgyecd 44 
                   g +  gk+ k  g+g+y + fd g e++
  MMETSP1325-20131115|5896_1 337 DGGRYRPGKVAKVLGGGQYAIAFDHGXEAK 366
                 5678889*******************9986 PP

>> PF09465.5  Lamin-B receptor of TUDOR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0006       1.6       4      44 ..     144     183 ..     141     195 .. 0.79
   2 ?    0.4   0.0      0.16   4.5e+02       7      46 ..     209     247 ..     205     250 .. 0.76
   3 ?   -1.6   0.1      0.71   1.9e+03      36      44 ..     296     304 ..     293     306 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0006
   PF09465.5   4 rkyadGevvmGRWPGssLYYevkvlsfdsksqlYtviYkDG 44 
                 + +++G+vv  R  G + YY  ++    + ++ + + Y DG
  MMETSP1325-20131115|5896_1 144 AAFKQGDVVECRHGGGAQYYPGRIARA-HPNNTFDIDYDDG 183
                 679*****************9998653.4456677888877 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.16
   PF09465.5   7 adGevvmGRWPGssLYYevkvlsfdsksqlYtviYkDGte 46 
                 ++G+ +  R  G   YY  k+    + +  + + Y DG e
  MMETSP1325-20131115|5896_1 209 REGDSIECRHGGGPHYYPGKIARA-HPDGTFDIAYDDGDE 247
                 579999999999999999988643.445567888888865 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.71
   PF09465.5  36 lYtviYkDG 44 
                 lY++ Y DG
  MMETSP1325-20131115|5896_1 296 LYNIAYDDG 304
                 89******9 PP

>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  29.3   0.00069       1.9      92     218 ..       6     131 ..       2     140 .. 0.68

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00069
   PF10243.4  92 aaktsrakeekneskkeeekrkekkkeekkkkeekekeeekerkqkeelkekrkpkekekekeKkkeeekdrekekererkkaserekkekkkdsknkkkdkekekkkeksrksekgkeeerskdee 218
                 aa+++++ e++ +++ke e+r e++  e++++ee+e ee++ + ++e++ ++++++e++ ++eK+ e+e ++e+++ rer+ a++++ +ek+++ +  +++  ++++++++++ ++ ++++ +  ee
  MMETSP1325-20131115|5896_1   6 AAAAAAKLEQERREQKERESRLEQEMIERREREEREAEEKA-EAEREAARREARERERQLQEEKEAEAEAEAERQRTREREDAAAAAIREKEERMQRMARESAEKRAAQQQAEMAAINARRAAAAEE 131
                 556777889999999999*****************999666.5577888888999999999999999999999999999999999988877553333333322222222222222222222222222 PP

>> PF04502.8  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  18.3    0.0019       5.2     161     285 ..      15     130 ..       3     152 .. 0.61

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0019
   PF04502.8 161 qsrkadvavesmLealrreekkeeeeeeeedeelikslslgleseedrrlakdedkedekekkketseksakssssakatdiekksaakkseeessskakknsesklkskkalkslvvkkkaape 285
                 q+r+++ ++es Le+   e++++ee+e+ee +e  ++++   e  e++r +++ +ke e   + e++ +++++  +a a++i +k++ +++++ +s ++   +     ++ +++ +  ++ aa e
  MMETSP1325-20131115|5896_1  15 QERREQKERESRLEQEMIERREREEREAEEKAEAEREAARR-EARERERQLQE-EKEAE--AEAEAERQRTREREDAAAAAIREKEERMQRMARESAEKRAAQ-----QQAEMAAINARRAAAAE 130
                 66778888888888887777777777777777666666444.33333333333.23333..345666666667777777777776666666665555544443.....44555555444444444 PP

>> PF04499.10  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   6.4    0.0024       6.5     264     330 ..      29      99 ..       5     207 .. 0.54

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0024
  PF04499.10 264 eeeee.seeeaedtsadaeqdsaedkreleasnasedseeededdeeseeseesees...aaelteeklrs 330
                 +e +e  e+e+ + + +ae++ ++  re+++ + + ++e+e+e ++e e++++ e +   aa  +e++ r 
  MMETSP1325-20131115|5896_1  29 QEMIErREREEREAEEKAEAEREAARREARERERQLQEEKEAEAEAEAERQRTREREdaaAAAIREKEERM 99 
                 22222122222222222222222222222222222222222222222222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1988  (0.145407); expected 273.4 (0.02)
Passed bias filter:                      708  (0.0517847); expected 273.4 (0.02)
Passed Vit filter:                       228  (0.0166764); expected 13.7 (0.001)
Passed Fwd filter:                        73  (0.00533938); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.71u 0.42s 00:00:02.13 Elapsed: 00:00:00.85
# Mc/sec: 1124.88
//
Query:       MMETSP1325-20131115|5898_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.09   11.9   0.0       0.13   11.4   0.0    1.2  1  PF05182.8 Fip1 motif


Domain annotation for each model (and alignments):
>> PF05182.8  Fip1 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   9.4e-06      0.13       8      24 ..      20      36 ..      13      38 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 9.4e-06
   PF05182.8  8 feekPWrkpGadisdYF 24
                ++  PW  pGa    +F
  MMETSP1325-20131115|5898_1 20 VQLAPWAMPGAVFAGWF 36
                6779************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|5897_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 474.75
//
Query:       MMETSP1325-20131115|5901_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 499.67
//
Query:       MMETSP1325-20131115|5892_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-31  109.7   0.1    1.9e-31  109.2   0.0    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.2   0.0   1.4e-35   1.9e-31       5     155 ..      42     230 ..      37     231 .. 0.84

  Alignments for each domain:
  == domain 1    score: 109.2 bits;  conditional E-value: 1.4e-35
                 XXXXXXXXXX.XXXXXX.---................-TTTTT--------TTT------------------S--TT--.STT---...--...--S-TT.THHHH---HHHHHHHHTT---------------..................---------..-----------STTT----TTTTT------- CS
  PF00504.16   5 ldgslpgdlg.fDplglskdp................tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeagg...ls...lptllalqillligflelareqelkapesegsekraypGg..................lgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 l  +l++ +  +Dplgl++++                t+ +lr+aE++HGRvAM+a++G+l+  ++ +++  +   + p  + agg   ++   +p ++ +qi+ +i+flel+ e  l    ++ ++k ++pG                   ++fdp++l+   ++e+ka+   +Ei+nGRlAMi+++gf+++a
  MMETSP1325-20131115|5892_1  42 LAKELNPVVPfWDPLGLADQTfwatepwlalgstneaTIGWLRHAEIKHGRVAMAAFVGYLAGANGVQFPWPQTLKGDPFPY-AGGspeAQwdaIPLAAKWQIISVIAFLELWGECAL----DTHYMKGGKPGVypplvnnanmqiphpvplNLFDPFNLSakASPEKKAKGLIAEINNGRLAMIGIMGFLAEA 230
                 55566666778******96669******************************************999977765555555433.332233223459999999***********755544....3458899999999999**************89******99999**************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1286.21
//
Query:       MMETSP1325-20131115|5904_1  [L=297]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-59  200.0   0.0    3.7e-59  199.6   0.0    1.0  1  PF01761.15 3-dehydroquinate synthase
    0.00027   20.2   0.0     0.0011   18.2   0.0    1.9  1  PF13685.1  Iron-containing alcohol dehydrogenase
  ------ inclusion threshold ------
       0.14   10.6   0.5       0.84    8.0   0.3    2.1  1  PF00465.14 Iron-containing alcohol dehydrogenase


Domain annotation for each model (and alignments):
>> PF01761.15  3-dehydroquinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.6   0.0   8.2e-63   3.7e-59      28     247 ..       6     225 ..       3     237 .. 0.94

  Alignments for each domain:
  == domain 1    score: 199.6 bits;  conditional E-value: 8.2e-63
                 --TT-EEEEE----TTT----HHHHTT---EEEE---SHHHHHCTT------BB-------B------SEEEEEGGGGCCS-HHHHH---HHHHHHHHTT-HHHHHHHHHCCHHCHH..--THCCHHHHHHHHHHHHHHHHHHTTT----GGGGG-------CCCHHCTTTS----TTT---HHHHHHHHH-----HHHHHHHHHHHHH-----STT-H--H CS
  PF01761.15  28 lerksliialGGGvvgDlaGfvAatylRGvrfiqvPTtllaqvDssvGgKtginlpegKNliGaFyqPkaVlidlevLktlpkrelraGlaEviKyaliadaelfelleeeaeallk..ekeeealeeliarsvevkaevveeDekekglralLnlGHtigHaiEallgykllHGeaVaiGmvlaaelseklgllkeeeverllkllkklglptslkelldv 247
                 l+r++ +ia+GGGv++D+aGf+ a+++RG++  ++PTtll++vD+svG K++in+ + KN +G F  P+  ++d ++L t +k ++r+G++E++K al++d++lf+l+ee+ e+l++   +++  ++ +i+ sv +    +  D  e++l + +++GH+++ ++E+ +++kl+HGeaVai+ ++ + +++++gl+++e+++r+l++ +kl+lp s+    ++
  MMETSP1325-20131115|5904_1   6 LRRSEPVIAIGGGVLTDVAGFACALWRRGIPWCRMPTTLLGMVDASVGIKVAINY-KRKNGVGHFFSPTHTFVDASFLGTVSKPDIRSGCGEIMKAALVHDKRLFDLMEEHGEQLIEenFMNNVIADMVIKYSVDTMLMCIGPDLWEESLIRPMDFGHSFSRTLEQREDFKLRHGEAVAIDCIMSTMIAKQKGLVSPEQAQRVLDVYAKLKLPCSIAGI-TA 225
                 6899**************************************************9.68******************************************************999986545667778899************************************************************************************99877.44 PP

>> PF13685.1  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.3e-07    0.0011      76     249 ..       9     182 ..       3     183 .. 0.67

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 2.3e-07
   PF13685.1  76 adlvvavGsGtinDlaKyvsa..klgkpyisvpTaa..SmDGyaspgasltvdngkkktlspaklPiaiiaDldiikkAPkrliasGfGDllgkitaladwklaeevaeeiaekaaelvqealeklledekdeealkellealalsglam......srpaSgaeHllShalemea.kpllHGekV 249
                  + v+a+G+G + D+a ++ a  ++g+p   +pT++   +D+ +  ++++  +  +k  + +   P+  ++D +++ +  k  i+sG+G+++ k   + d +l + ++e+  + + e +++++   ++    ++++k+ ++++++++          rp     H +S +le++   +l HGe V
  MMETSP1325-20131115|5904_1   9 SEPVIAIGGGVLTDVAGFACAlwRRGIPWCRMPTTLlgMVDASVGIKVAINYK--RKNGVGHFFSPTHTFVDASFLGTVSKPDIRSGCGEIM-KAALVHDKRLFDLMEEHGEQLIEENFMNNV---IA----DMVIKYSVDTMLMCIGPDlweeslIRPM-DFGHSFSRTLEQREdFKLRHGEAV 182
                 5679**************998446899********844578888888888885..6777777889*************************98.455566777777777766666666665554...22....2233333333333322222222212333.334666666666643355566665 PP

>> PF00465.14  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.3   0.00018      0.84      82     221 ..      12     127 ..       7     254 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00018
                 EE------HHHHHHHHHHHTT...................--BEE--SS-S-S-TT-SEEEEE--.---EE.EEEE-S.--SEEE--HHHHHHS-HHHHH-----HHHHHHHHHHH-----HHHHHHHHHHHHHHH.HH-- CS
  PF00465.14  82 ivAvGGGsviDtAKaiallltnpgelldyegkakkkkkpalpliaiPTtaGtGsevtplavitde.etkrklslaspkllPdlaivDpeltltlPkrvtaatglDalthaiEayvskkanplsdalaeeairliaenlpra 221
                 ++A+GGG   D+A  + +l   +                 +p    PTt      v +   i    + krk ++++   +P+  +vD +++ t+ k  + ++ + ++  a+   v  +   l d + e++ +li en+ + 
  MMETSP1325-20131115|5904_1  12 VIAIGGGVLTDVAGFACALWRRG-----------------IPWCRMPTTLLG--MVDASVGIKVAiNYKRKNGVGHFF-SPTHTFVDASFLGTVSKPDIRSGCGEIMKAAL---V--HDKRLFDLMEEHGEQLIEENFMNN 127
                 9*************999999943.................888888888752..344444444332345666777755.88888888888888877777777776665443...3..444555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.34s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1452.49
//
Query:       MMETSP1325-20131115|5906_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        86  (0.00629023); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 424.35
//
Query:       MMETSP1325-20131115|5905_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2649  (0.193754); expected 273.4 (0.02)
Passed bias filter:                      757  (0.0553686); expected 273.4 (0.02)
Passed Vit filter:                       416  (0.0304272); expected 13.7 (0.001)
Passed Fwd filter:                       219  (0.0160181); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 3.02u 0.44s 00:00:03.46 Elapsed: 00:00:01.03
# Mc/sec: 290.82
//
Query:       MMETSP1325-20131115|5903_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-61  203.9   0.1    1.2e-60  203.4   0.1    1.2  1  PF00071.17 Ras family
    3.2e-18   66.2   0.0    5.5e-18   65.4   0.0    1.4  1  PF08477.8  Miro-like protein
    1.6e-12   46.9   0.0    2.2e-12   46.4   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    6.2e-06   25.4   0.0    7.9e-06   25.0   0.0    1.2  1  PF04670.7  Gtr1/RagA G protein conserved region
    0.00014   21.7   0.0    0.00024   20.9   0.0    1.3  1  PF01926.18 50S ribosome-binding GTPase
     0.0023   17.2   0.0     0.0087   15.3   0.0    1.8  1  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.021   14.8   0.0      0.051   13.5   0.0    1.6  1  PF13401.1  AAA domain
       0.11   12.8   0.0       0.49   10.6   0.0    1.9  2  PF13191.1  AAA ATPase domain
       0.12   11.4   0.0       0.23   10.5   0.0    1.5  1  PF03193.11 Protein of unknown function, DUF258


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.4   0.1   7.9e-64   1.2e-60       1     161 [.      90     250 ..      90     251 .. 0.99

  Alignments for each domain:
  == domain 1    score: 203.4 bits;  conditional E-value: 7.9e-64
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 K +++Gd++vGK++lll+f++++F+  ++ Tigv+f  + +++d++++kl+iwDTAGqe f+s++++yyr+a g+llvydit+r++f+++++w+ee k+  + n++i+L+GnK+Dl+ +ravs++ege++a+e+gl fletSAkt+ nve+af + +++i+
  MMETSP1325-20131115|5903_1  90 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDSRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEAKQNSNPNMVIMLIGNKSDLHMRRAVSFKEGEQFAEEHGLIFLETSAKTAANVEQAFIKTAEKIY 250
                 89**********************************************************************************************************************************************************99986 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.0   3.6e-21   5.5e-18       2     119 .]      91     204 ..      90     204 .. 0.86

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 3.6e-21
   PF08477.8   2 vvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                  +++Gd+gvGKs ll q++ + f+   +   ++g + +   +++d  + +l++wd++g+e + +      + a+++llvyd+t++++++++     wl+e+++  +  ++++l+gnk D
  MMETSP1325-20131115|5903_1  91 YIIIGDTGVGKSCLLLQFTDKRFQ--PVHDLTIGVEFGARMVNIDSRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHL---TRWLEEAKQNSNPnMVIMLIGNKSD 204
                 689*********************..666666666666668888888888**************88888*********************8...678888876444369********98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.0   1.4e-15   2.2e-12      15     145 ..      89     225 ..      81     254 .. 0.75

  Alignments for each domain:
  == domain 1    score: 46.4 bits;  conditional E-value: 1.4e-15
                 EEEEEE--TT---HHHHHHHHHS-EEE.E-S--S-E....EEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTST..T---HHHHHHHTTTTTS CS
  PF00025.16  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfn....veeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlp..ealseeelrellgleel 145
                 ++ +++G  + GK+ +l ++++++++  +  Tig +    + ++  +++k+++wD  Gqe+ R++ ++Y++   + + v D + r+ +++  + L++  ++  + ++++++++NK Dl+   a+s +e ++  + + l
  MMETSP1325-20131115|5903_1  89 FKYIIIGDTGVGKSCLLLQFTDKRFQPvHDLTIGVEfgarMVNIDSRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEAKQN-SNPNMVIMLIGNKSDLHmrRAVSFKEGEQFAEEHGL 225
                 688999*99***************99744557664411114566669************************************************997655.5566667778*****852267777776666666553 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   5.2e-09   7.9e-06       2     134 ..      91     214 ..      90     254 .. 0.79

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 5.2e-09
   PF04670.7   2 lLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrf.lgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspeakvfvli.hKmDlisedereeife 134
                  +++G +g GK+++    F +   + +  L++ ++     v++ ++++kl++wD+ Gqe+f + +    +++     ++l+ V Di+    +++++++++ le ++q+s    v +li +K Dl   + r  +f+
  MMETSP1325-20131115|5903_1  91 YIIIGDTGVGKSCL-LLQFTDKRFQPVHDLTIGVEFGARMVNIdSRQIKLQIWDTAGQESFRSIT----RSYYRGAAGALL-VYDIT---RRDTFNHLTRWLEEAKQNSNPNMVIMLIgNKSDLH--MRRAVSFK 214
                 5899********96.578888888888888888888888887725689**********9998875....555555666655.99***...6789*************998888888885788864..44555555 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   1.6e-07   0.00024       3     104 ..      92     189 ..      90     202 .. 0.66

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 1.6e-07
                 EEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE...ETTE...EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTSHHHHHHHHHHHHH...H.T CS
  PF01926.18   3 aivGrpNvGKStLinaLtgekaakvsdypgtTrditenev...kkek...iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasavlkeadkellnel...e.a 104
                 +i+G + vGKS L+ + t++   + + ++  T  ++ ++    ++++   ++++Dt+G           e++++++++  + a ++llv d+++   ++ ++l ++l   + +
  MMETSP1325-20131115|5903_1  92 IIIGDTGVGKSCLLLQFTDK---RFQPVHDLTIGVEFGARmvnIDSRqikLQIWDTAG----------QESFRSITRSYyRGAAGALLVYDITR--RDTFNHLTRWLeeaKqN 189
                 89****************65...45666666777744322344222245458******..........236777888888999********654..34566777777433132 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   5.7e-06    0.0087      63     176 ..     132     239 ..      88     258 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 5.7e-06
                 EET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.S-HHHHHHHHHHHHTT--...EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHH CS
  PF00009.22  63 leketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqTeevlrlakklgvk...iivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegid 176
                 +  ++++ ++++ Dt G ++F + + +  r + ga+lv d +     +   + l+ ak+   +   i+++ NK D+   ++   +e  +  + e++         ++ +Sa+++ +++
  MMETSP1325-20131115|5903_1 132 I--DSRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRdTFNHLTRWLEEAKQNSNPnmvIMLIGNKSDLHMRRAVSFKEGEQ--FAEEH------GLIFLETSAKTAANVE 239
                 3..47888999************99999************9976444455556667777766675344566****99666665555554..32222......3456666666666655 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.3e-05     0.051       8      49 ..      92     145 ..      84     201 .. 0.60

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.3e-05
   PF13401.1   8 vvtGesGvGKTtllrrlarqldeeaeaae...............karvvfveapast 49 
                 +++G +GvGK++ll ++ +++ + +   +               ++r+++ ++ + +
  MMETSP1325-20131115|5903_1  92 IIIGDTGVGKSCLLLQFTDKRFQ-PV--HdltigvefgarmvniDSRQIKLQIWDTA 145
                 89***************998632.22..13356666666666665555555555555 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00032      0.49      27      48 ..      92     113 ..      89     166 .. 0.76
   2 ?   -1.0   0.0       1.2   1.8e+03       5      31 ..     172     201 ..     169     203 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00032
   PF13191.1  27 lvtGpsGiGKSsLlrelakpil 48 
                 +++G+ G+GKS Ll ++ +  +
  MMETSP1325-20131115|5903_1  92 IIIGDTGVGKSCLLLQFTDKRF 113
                 69************99776644 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 1.2
   PF13191.1   5 RereleaLlaalrr.vsegsp..lllvtGp 31 
                 R + ++ L++ l++  ++++p  ++ ++G+
  MMETSP1325-20131115|5903_1 172 RRDTFNHLTRWLEEaKQNSNPnmVIMLIGN 201
                 556778899999995666666866778886 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00015      0.23      39      67 ..      92     120 ..      87     160 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00015
                 EEE-------HHHHHHH--------S--- CS
  PF03193.11  39 vlvGqSGvGKSsLinallpeldlkvgevs 67 
                 +++G +GvGKS L+ +++ +  + v++++
  MMETSP1325-20131115|5903_1  92 IIIGDTGVGKSCLLLQFTDKRFQPVHDLT 120
                 89************999888877766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.39s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 1367.33
//
Query:       MMETSP1325-20131115|5907_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 1093.99
//
Query:       MMETSP1325-20131115|5911_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   14.3   3.3      0.089   12.8   2.3    1.8  1  PF07898.8 Protein of unknown function (DUF1676)
      0.047   13.5   3.1        5.6    6.8   1.8    2.4  2  PF08293.6 Mitochondrial ribosomal subunit S27
       0.12   11.4   0.7       0.13   11.3   0.5    1.2  1  PF09468.5 Ydr279p protein family (RNase H2 complex component)
        3.6    6.1   8.3          4    5.9   5.8    1.2  1  PF03985.8 Paf1


Domain annotation for each model (and alignments):
>> PF07898.8  Protein of unknown function (DUF1676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.3   2.6e-05     0.089      56      97 ..     106     170 ..      59     178 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.6e-05
   PF07898.8  56 ldrlerflasHsLqvklpeatgagavsra................derreveeaR.......gkk 97 
                 ++rl++f+  H+ qv ++e+++ ga  ++                d+++e+eeaR       +kk
  MMETSP1325-20131115|5911_1 106 QERLATFMEHHADQVGFGELSAFGAEVAKrifrrfavstkrpgdkDTDEEEEEARqkeeeeeKKK 170
                 699****************998777655577************************8887643222 PP

>> PF08293.6  Mitochondrial ribosomal subunit S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0072        24      27      70 ..      34      78 ..      22      87 .. 0.71
   2 ?    6.8   1.8    0.0017       5.6      59      84 ..     149     174 ..     130     179 .. 0.70

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0072
   PF08293.6 27 kkiLrqrlkgpelaayYPkkvvtfkdlkklyp..dllfrDekedfr 70
                +++L+qrl+gp++ +  Pk+  + + l ++ +     +r+  e+ r
  MMETSP1325-20131115|5911_1 34 AQLLSQRLYGPQMGELKPKHR-YPQALAEWTRarRAAAREMAEQVR 78
                489*********998777666.555555555545556666666666 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0017
   PF08293.6  59 dllfrDekedfreeklelrklRgKga 84 
                 d  + +e+e+ r+++ e  k++gKg+
  MMETSP1325-20131115|5911_1 149 DKDTDEEEEEARQKEEEEEKKKGKGK 174
                 55566677777777777777777776 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.5   3.7e-05      0.13     247     290 ..     117     178 ..      38     186 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 3.7e-05
                 X......................XXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXX CS
   PF09468.5 247 a......................sdlskkreaeedaeaaesraekkrkkeeeekkkkakeskgvka 290
                 a                        +s kr  ++d +++e++a  ++k+eeeekkk ++  kg+ +
  MMETSP1325-20131115|5911_1 117 AdqvgfgelsafgaevakrifrrFAVSTKRPGDKDTDEEEEEA--RQKEEEEEKKKGKG--KGQAK 178
                 1334555555554444477775544555555555555555555..44444444444444..33332 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   5.8    0.0012         4     368     411 ..     144     187 ..     103     194 .] 0.57

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0012
   PF03985.8 368 iefeevdedeeeeeeqrseeeeeeeeedeeeeeseeeeeleske 411
                  + + +++ +eeeee r++eeeee+++++ + +++e+  + ++e
  MMETSP1325-20131115|5911_1 144 TKRPGDKDTDEEEEEARQKEEEEEKKKGKGKGQAKEKGGEGREE 187
                 33444455555555545555555555555555544444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1100  (0.0804564); expected 273.4 (0.02)
Passed bias filter:                      641  (0.0468841); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 877.16
//
Query:       MMETSP1325-20131115|5909_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-13   49.7   2.7    4.5e-13   49.5   1.9    1.1  1  PF01086.12 Clathrin light chain
     0.0017   17.8   3.5     0.0021   17.5   2.4    1.0  1  PF04286.7  Protein of unknown function (DUF445)
  ------ inclusion threshold ------
        1.4    6.6   7.9        1.5    6.5   5.5    1.0  1  PF00012.15 Hsp70 protein


Domain annotation for each model (and alignments):
>> PF01086.12  Clathrin light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   1.9   9.9e-17   4.5e-13     100     219 ..      80     200 ..      31     203 .. 0.76

  Alignments for each domain:
  == domain 1    score: 49.5 bits;  conditional E-value: 9.9e-17
  PF01086.12 100 iaqad.rveeeepesireWreerdkeieerdeasekkkeeliekAkkeiddfYenynekkektkaqtrkeeeeflaerddtskdgTe...WervakLvdfsdkgskqgkdksRfrelLlsLKkd 219
                 +++a+  v +e    i+e   + ++e+++++ea+++k +el+++A++ +d ++++  + k  + a++rkee e l+ r++  k  Te     rv  L+    k++ + +d+ R+  l +sLK +
  MMETSP1325-20131115|5909_1  80 ATDAPmGVVDE-NAKIKEFEAKFAAEMAKKEEAERAKAQELKDEAEQWLDSWHDKKTDEKVEKAATNRKEEAEGLEMREELLKAATEdnpYKRVYDLI--GAKDKADEEDTARMYGLVVSLKSK 200
                 23333033444.899***************************************9988888888999999999********99999944466777777..34444479**************55 PP

>> PF04286.7  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   2.4   4.5e-07    0.0021      71     147 ..     100     176 ..      89     202 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 4.5e-07
   PF04286.7  71 sklaewlknptnkeslaaiaeellkniledlddesikellkknlektleevipeplagkllellleeerhkkllddl 147
                 + +ae++k+++ +++ a++++++++++l+++ d++  e ++k+++++ ee +  ++ ++ll++++e++  k++ d +
  MMETSP1325-20131115|5909_1 100 KFAAEMAKKEEAERAKAQELKDEAEQWLDSWHDKKTDEKVEKAATNRKEEAEGLEMREELLKAATEDNPYKRVYDLI 176
                 3344555566666666999*************************************************999999877 PP

>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   5.5   0.00033       1.5     515     578 ..     102     168 ..      60     191 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00033
                 HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC.GGGSSHHHH..HHHHHHHHHHHHHHT---- CS
  PF00012.15 515 eaeesaeedkkkkeaieakneleelvyslekkleee.kekvseaek..ekkveeaieelkeeleged 578
                  ae  ++e++++++a e k+e+e+++ s ++k ++e  ek+  ++k   + +e  +e lk+++e++ 
  MMETSP1325-20131115|5909_1 102 AAEMAKKEEAERAKAQELKDEAEQWLDSWHDKKTDEkVEKAATNRKeeAEGLEMREELLKAATEDNP 168
                 46677788888889999***********998888776444444444346677777777777765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1523  (0.111396); expected 273.4 (0.02)
Passed bias filter:                      714  (0.0522235); expected 273.4 (0.02)
Passed Vit filter:                        88  (0.00643651); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.41s 00:00:01.06 Elapsed: 00:00:00.54
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|5913_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-11   42.8   5.8    6.1e-11   42.3   4.0    1.2  1  PF04178.7 Got1/Sft2-like family


Domain annotation for each model (and alignments):
>> PF04178.7  Got1/Sft2-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   4.0   4.4e-15   6.1e-11       2      93 ..      52     143 ..      46     149 .. 0.90

  Alignments for each domain:
  == domain 1    score: 42.3 bits;  conditional E-value: 4.4e-15
   PF04178.7   2 iGvlfmllsliflflpvlllkplkFavlftlGnllflgslafliGpkkqlkfmfskerlpaTliyivslvltlyvalilksylltvlfsllq 93 
                 +G l+++l+++++  +    +++ F+ ++ +Gn+++++++++ +Gpkk +k+mf+k+r ++T++ +  +++++ +a++    +l++ ++ ++
  MMETSP1325-20131115|5913_1  52 FGYLLTILATLTISEGYDEENMQRFCGFYIVGNFIAIFATGLWVGPKKLCKKMFKKKRRIGTVVWFSLMIAVFTTAMLKGPLGLVLGMMAAE 143
                 7899999998888888866999*******************************************************988888887776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       570  (0.041691); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 723.70
//
Query:       MMETSP1325-20131115|5915_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-21   75.2   1.1    5.7e-21   74.9   0.8    1.1  1  PF01593.19 Flavin containing amine oxidoreductase


Domain annotation for each model (and alignments):
>> PF01593.19  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.8   4.2e-25   5.7e-21     342     449 ..       2     136 ..       1     137 [. 0.90

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 4.2e-25
                 EEEECCC.HHHTTS-HHHHHHHHHHHHHHHHHH.SSB--S..........EEEEEETTTSTTT---ECCHBHHHHHHHHHHHHS-BB.................SSEEE--GTT-TTTTTS---TTT---HHHHHH CS
  PF01593.19 342 yvlgdaa.releslsdeellervledLrkllgnedvpdpk..........dtvvtrWstdplargsysyvsvgssgddrpalaepvg.................prlffAGehtsrgypgtveGAvlSGlraAari 449
                 +v g+aa r +++ sdee++e +   L  +   ++ ++             ++++rW++ p++rgsys+v+vg++ d+++ l  p+                  prl+fAGeht+r+y++t++ A+l+G r+ +r+
  MMETSP1325-20131115|5915_1   2 WVHGHAAaRAMHARSDEEVAEDIAATLTHFCS-AELLSGAggaggiprakCVIRSRWRASPWTRGSYSFVAVGADVDMIDELVRPLCgevgpeeqeqrqeadepPRLCFAGEHTHRTYYSTMHAAYLTGEREGRRV 136
                 5666666699***********99999999887.44444446777888888999********************************99*********************************************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 760.58
//
Query:       MMETSP1325-20131115|5916_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-15   56.8  33.8    2.5e-08   33.2   4.1    3.0  3  PF07699.8  GCC2 and GCC3
    4.5e-06   26.1  17.6    0.00049   19.6   3.4    2.9  3  PF07562.9  Nine Cysteines Domain of family 3 GPCR
     0.0069   16.3  17.3      0.053   13.4   2.1    3.9  4  PF00020.13 TNFR/NGFR cysteine-rich region
  ------ inclusion threshold ------
      0.016   13.7  21.1      0.025   13.1  14.6    1.4  1  PF03302.8  Giardia variant-specific surface protein
      0.016   14.9  16.5       0.61    9.9   0.8    4.2  4  PF00053.19 Laminin EGF-like (Domains III and V)
      0.035   13.7  12.0       0.25   11.0   0.9    2.6  2  PF10080.4  Predicted membrane protein (DUF2318)
       0.13   11.9   0.4       0.13   11.9   0.3    2.8  3  PF06677.7  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   6.8   2.4e-09   4.7e-06       9      48 .]       6      45 ..       2      45 .. 0.92
   2 !   33.2   4.1   1.3e-11   2.5e-08       1      43 [.      14      57 ..      14      58 .. 0.88
   3 !   20.8   1.7   9.3e-08   0.00018       1      42 [.      48      93 .]      48      93 .] 0.82

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 2.4e-09
   PF07699.8  9 kkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48
                + Ce C  G Y++e+g+ +C +C +gt+ +++gs+s + C
  MMETSP1325-20131115|5916_1  6 ESCESCAAGHYSKESGSSSCSSCASGTFQDQEGSTSCKVC 45
                68*********************************99988 PP

  == domain 2    score: 33.2 bits;  conditional E-value: 1.3e-11
   PF07699.8  1 Gtylk.kgnkkCepCprGtYkneegqkkCiaCppgttTskkgsk 43
                G+y+k +g++ C+ C  Gt++++eg+++C+ C pg++ +++++k
  MMETSP1325-20131115|5916_1 14 GHYSKeSGSSSCSSCASGTFQDQEGSTSCKVCAPGKYSASTEAK 57
                9999844559*************************988888776 PP

  == domain 3    score: 20.8 bits;  conditional E-value: 9.3e-08
   PF07699.8  1 Gtylkkgn.kkCepCprGtYkneegqkkCiaCppg...ttTskkgs 42
                G+y+ + + k C+ Cp + + ++ +++ C+ C  +    +Ts +gs
  MMETSP1325-20131115|5916_1 48 GKYSASTEaKDCTDCPVDQFAPKNESQLCELCATTyglDVTSNEGS 93
                677765445***********************99877777777776 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   1.8   1.5e-06     0.003      27      51 ..       7      31 ..       7      34 .. 0.92
   2 !   19.6   3.4   2.5e-07   0.00049       8      53 ..      27      67 ..      26      68 .. 0.91
   3 !    8.7   1.8   0.00063       1.2      27      51 ..      58      82 ..      58      84 .. 0.93

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.5e-06
   PF07562.9 27 dCvpCpegeisnetdettCkkCpee 51
                +C++C++g++s+e+++ +C +C ++
  MMETSP1325-20131115|5916_1  7 SCESCAAGHYSKESGSSSCSSCASG 31
                5*********************987 PP

  == domain 2    score: 19.6 bits;  conditional E-value: 2.5e-07
   PF07562.9  8 pCkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeqw 53
                +C  G+ + + +g++    +C  C+ g++s +t++ +C++Cp +q 
  MMETSP1325-20131115|5916_1 27 SCASGTFQDQ-EGST----SCKVCAPGKYSASTEAKDCTDCPVDQF 67
                7999999966.8888....8**********************9985 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.00063
   PF07562.9 27 dCvpCpegeisnetdettCkkCpee 51
                dC++Cp  ++  ++++  C+ C ++
  MMETSP1325-20131115|5916_1 58 DCTDCPVDQFAPKNESQLCELCATT 82
                7*********************876 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   1.0   5.2e-05       0.1       1      26 [.      11      33 ..      11      37 .. 0.81
   2 !   13.4   2.1   2.7e-05     0.053       1      27 [.      28      51 ..      28      61 .. 0.76
   3 !   11.0   0.4   0.00016      0.31       1      26 [.      45      67 ..      45      71 .. 0.75
   4 ?    2.4   0.4     0.075   1.5e+02       1      23 [.      62      81 ..      62      90 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.2e-05
                C-TTEEEESSCSEEEEEEE-B-TTCE CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepgtv 26
                C  g+Y+++++ +    Cs+C +gt+
  MMETSP1325-20131115|5916_1 11 CAAGHYSKESGSSS---CSSCASGTF 33
                9*******999665...588888886 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 2.7e-05
                C-TTEEEESSCSEEEEEEE-B-TTCEE CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepgtvl 27
                C  gt++d+++ +  +sC+ C pg++ 
  MMETSP1325-20131115|5916_1 28 CASGTFQDQEG-S--TSCKVCAPGKYS 51
                9*******999.5..567999998764 PP

  == domain 3    score: 11.0 bits;  conditional E-value: 0.00016
                C-TTEEEESSCSEEEEEEE-B-TTCE CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCepgtv 26
                C +g+Y++s+  +    C+ C+ +++
  MMETSP1325-20131115|5916_1 45 CAPGKYSASTEAKD---CTDCPVDQF 67
                ********866444...588887776 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.075
                C-TTEEEESSCS.EEEEEEE-B-T CS
  PF00020.13  1 CeegtYtdsknh.rqClsCskCep 23
                C+ +++   kn    C    +C  
  MMETSP1325-20131115|5916_1 62 CPVDQFAP-KNEsQLC---ELCAT 81
                78888888.7763455...55544 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1  14.6   1.3e-05     0.025     268     327 ..       4      66 ..       1      89 [. 0.81

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.3e-05
   PF03302.8 268 sstvcttcldGyvks...sdacakcdsscetctGaattcktcatGyyksatkevactssesdk 327
                 +  +c++c+ G+  +   s++c+ c+s+    +  +t+ck+ca G y ++t+   ct++  d+
  MMETSP1325-20131115|5916_1   4 ARESCESCAAGHYSKesgSSSCSSCASGTFQDQEGSTSCKVCAPGKYSASTEAKDCTDCPVDQ 66 
                 5678*****996544478899******99988888899*********************9884 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.8   0.00031      0.61      29      49 .]       6      25 ..       2      25 .. 0.83
   2 ?    6.9   2.0    0.0027       5.3      29      49 .]      23      42 ..      19      45 .. 0.80
   3 ?    6.1   1.5    0.0047       9.2      29      49 .]      40      59 ..      38      62 .. 0.76
   4 ?    3.1   1.0     0.042        82      27      45 ..      55      73 ..      51      92 .. 0.56

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00031
                --S-EE----B-TTTTGGGSS CS
  PF00053.19 29 rkCdrCkpgyyglpsdsgegC 49
                + C+ C+ g+y ++s s  +C
  MMETSP1325-20131115|5916_1  6 ESCESCAAGHYSKESGSS-SC 25
                68*********9977776.77 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0027
                --S-EE----B-TTTTGGGSS CS
  PF00053.19 29 rkCdrCkpgyyglpsdsgegC 49
                + C  C++g++++++ s+ +C
  MMETSP1325-20131115|5916_1 23 SSCSSCASGTFQDQEGST-SC 42
                58***********99555.55 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.0047
                --S-EE----B-TTTTGGGSS CS
  PF00053.19 29 rkCdrCkpgyyglpsdsgegC 49
                + C  C+pg y  ++ ++++C
  MMETSP1325-20131115|5916_1 40 TSCKVCAPGKYSAST-EAKDC 59
                57*********8755.44466 PP

  == domain 4    score: 3.1 bits;  conditional E-value: 0.042
                E---S-EE----B-TTTTG CS
  PF00053.19 27 eGrkCdrCkpgyyglpsds 45
                e ++C  C   ++  +++s
  MMETSP1325-20131115|5916_1 55 EAKDCTDCPVDQFAPKNES 73
                5555555555555432222 PP

>> PF10080.4  Predicted membrane protein (DUF2318)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.9   0.00013      0.25      33      66 ..       3      36 ..       1      41 [. 0.85
   2 ?    6.4   2.7    0.0033       6.4      37      68 ..      41      72 ..      36      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00013
   PF10080.4 33 vafdaCevCekkgYvqkgdklvCknCnvriales 66
                +a ++Ce C+   Y ++ ++  C +C    + ++
  MMETSP1325-20131115|5916_1  3 TARESCESCAAGHYSKESGSSSCSSCASGTFQDQ 36
                56789*********************98777665 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0033
   PF10080.4 37 aCevCekkgYvqkgdklvCknCnvrialesig 68
                +C+vC++  Y  + ++  C+ C v  + ++ +
  MMETSP1325-20131115|5916_1 41 SCKVCAPGKYSASTEAKDCTDCPVDQFAPKNE 72
                79999999999999999999999988777665 PP

>> PF06677.7  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.34   6.7e+02      18      23 ..       6      11 ..       4      14 .. 0.80
   2 ?   11.9   0.3   6.5e-05      0.13      19      40 ..      24      45 ..      22      46 .. 0.94
   3 ?    0.1   1.2       0.3   5.9e+02      18      40 ..      57      79 ..      56      80 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.34
   PF06677.7 18 ehCpkC 23
                e+C++C
  MMETSP1325-20131115|5916_1  6 ESCESC 11
                689999 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 6.5e-05
   PF06677.7 19 hCpkCgtpLfrlkdgkvfCpiC 40
                +C++C    f++  g ++C +C
  MMETSP1325-20131115|5916_1 24 SCSSCASGTFQDQEGSTSCKVC 45
                8********************9 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.3
   PF06677.7 18 ehCpkCgtpLfrlkdgkvfCpiC 40
                + C  C +  f +k+   +C  C
  MMETSP1325-20131115|5916_1 57 KDCTDCPVDQFAPKNESQLCELC 79
                56999999999999999999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       520  (0.0380339); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|5908_1  [L=744]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-33  115.8   0.0    1.8e-12   46.8   0.0    3.2  3  PF00071.17 Ras family
    8.3e-33  113.3   0.0    1.4e-32  112.5   0.0    1.4  1  PF05118.10 Aspartyl/Asparaginyl beta-hydroxylase
    5.8e-07   29.9   0.0    2.2e-06   28.0   0.0    1.9  2  PF08477.8  Miro-like protein
    2.9e-06   26.5   0.1    7.5e-06   25.2   0.1    1.6  1  PF07883.6  Cupin domain
    0.00082   18.9   0.1     0.0018   17.8   0.1    1.5  1  PF12937.2  F-box-like
  ------ inclusion threshold ------
      0.041   13.8   0.0       0.13   12.2   0.0    1.8  2  PF13401.1  AAA domain
      0.099   11.7   0.0        8.3    5.4   0.0    2.5  2  PF00025.16 ADP-ribosylation factor family
       0.13   11.5   0.0       0.28   10.4   0.0    1.5  1  PF05272.6  Virulence-associated protein E


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.1   2.1e-12   3.6e-09       1      53 [.     441     493 ..     441     495 .. 0.98
   2 !   46.8   0.0   1.1e-15   1.8e-12      51     102 ..     513     564 ..     501     571 .. 0.91
   3 !   29.0   0.0   3.1e-10   5.3e-07     106     155 ..     617     664 ..     591     670 .. 0.89

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 2.1e-12
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEE CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiw 53 
                 +l+l G  +vGK+s++lr+ +d F++++++Tigvdf++++++  ++  k++iw
  MMETSP1325-20131115|5908_1 441 RLILTGGAGVGKSSFVLRWADDFFTTSFIATIGVDFKMRSMKWGKEVFKVQIW 493
                 5899************************************************9 PP

  == domain 2    score: 46.8 bits;  conditional E-value: 1.1e-15
                 EEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST CS
  PF00071.17  51 eiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae 102
                 ++ DTAG e+f+sl+s yyr+a+g++l+yd ++r+sfe+v++w++++ ++++
  MMETSP1325-20131115|5908_1 513 HLKDTAGPERFRSLNSGYYRGANGCFLMYDKSNRASFEQVDEWFKQVLSKKR 564
                 689*******************************************998776 PP

  == domain 3    score: 29.0 bits;  conditional E-value: 3.1e-10
                 SEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHH CS
  PF00071.17 106 pivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafee 155
                 ++vL++nK+Dl++  avst+egee a  lg++++e+SAkt e+v++a   
  MMETSP1325-20131115|5908_1 617 ACVLLANKSDLAS--AVSTAEGEEKAAALGIPYFEVSAKTGEGVQNAARF 664
                 579********96..*****************************998655 PP

>> PF05118.10  Aspartyl/Asparaginyl beta-hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.0   8.4e-36   1.4e-32      26     163 .]     183     320 ..     168     320 .. 0.91

  Alignments for each domain:
  == domain 1    score: 112.5 bits;  conditional E-value: 8.4e-36
                 ---EE--SS-EEE-EEEEEEEE----B-HHHH---HHHHHHHTT-TTT--.-----EEEEEEEE-EEEEEE----TTEEEEEE-EE--.---.-EEEETTEEE-------EEE-TTS-EEEE--SSS-EEEEEEEEE-TT CS
  PF05118.10  26 eefsdagenlfakgkWkafvLksetgaqeealelvpktvalleelpeskgiaslrevrlsvlspgaeiipHrdptnlslrlHLgLatp.deg.cairvdeerkswreGellifDesfeHeaanesdqeRliLliDlehpe 163
                  + +d+  +  + g Wkaf L+ e++ +  +l+ +p t all++lp  k+  s++++ +svl+pg++i  H++ tn++lr+ L+L++    g   i+v++er+ + +G++++fD+s++H++an+sd+eR++Ll+Dl+hp+
  MMETSP1325-20131115|5908_1 183 SACEDITASVGEGGSWKAFALMDEGRLHRRNLASCPRTHALLKRLPLCKS--SMGYAYFSVLQPGTHIHTHTGVTNAKLRAQLVLSAGgTRGpGTITVNGERHVYVQGRAFVFDDSYPHSVANDSDEERVVLLVDLWHPD 320
                 455677777778899********************************996..**********************************997444168*******************************************96 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.3     4e+03      13     104 ..      95     180 ..      94     184 .. 0.58
   2 !   28.0   0.0   1.3e-09   2.2e-06       1     103 [.     441     563 ..     441     569 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 2.3
   PF08477.8  13 ssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrk 104
                 s+ l+q+++++ +  +++++ + + l+  +  v+  ++      + g++ l++         +a + v+ +tde+   ++ e++ ++a+lr+
  MMETSP1325-20131115|5908_1  95 SATLAQMLKGKLERGTITQDEHDAMLQTHERAVRHSDDA-ATDGTTGEAGLHH-----TGPLAALVAVLENTDESAGPTAAEIHREFAKLRS 180
                 566777777777755666666655555555555555544.2222333333444.....5667777888888888777777777777766665 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 1.3e-09
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefp..............kkklpeeikgdtlavktlevdvdtel..........lelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelr 103
                 ++++ G  gvGKss++ + + + f                 k  +e+++ ++ v  + +     +           +l d++g e++ + +    + a++  l+yd ++++s+e+v+e +++  + +
  MMETSP1325-20131115|5908_1 441 RLILTGGAGVGKSSFVLRWADDFFTtsfiatigvdfkmrSMKWGKEVFKVQIWVSRTPTS----IsrpsftskcpRHLKDTAGPERFRSLNSGYYRGANGCFLMYDKSNRASFEQVDEWFKQVLSKK 563
                 67899***************9988889999888855444333334444444444433344....25555999999899***********99999**********************99988765554 PP

>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   4.4e-09   7.5e-06      27      68 ..     271     313 ..     269     316 .. 0.89

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 4.4e-09
                 E--EEEEE-TEEEEE-TT-EEEE-TT-EBEEB--SSS.-EEEE CS
   PF07883.6  27 eGegeltvdgeeveleaGdsvyfpagtpHrfrNtgde.parll 68 
                 +G g++tv+ge++++ +G +++f+   pH ++N++de  ++ll
  MMETSP1325-20131115|5908_1 271 RGPGTITVNGERHVYVQGRAFVFDDSYPHSVANDSDEeRVVLL 313
                 6889*********************************555554 PP

>> PF12937.2  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1     1e-06    0.0018      11      45 ..     353     387 ..     347     389 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1e-06
                 HHHTTS-HHHHHHH----HHHHHHHHT-HHHHHHH CS
   PF12937.2  11 qIFsyLppsdLlrlalVCrrWrrvaldtlLWrrlv 45 
                 ++  +L+p d++r+++++ +W  + +d+++Wr+++
  MMETSP1325-20131115|5908_1 353 EVCTFLEPVDIVRATATSQQWKKFGRDDYVWRTMC 387
                 5667899**************************99 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         6     1e+04      51      84 ..      95     128 ..      80     132 .. 0.63
   2 ?   12.2   0.0   7.5e-05      0.13       7      66 ..     442     514 ..     441     564 .. 0.78

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 6
   PF13401.1  51 pkellqkllsalglpakgrltteellealqealr 84 
                 + +l+q+l ++l++++   ++++++l++ ++a+r
  MMETSP1325-20131115|5908_1  95 SATLAQMLKGKLERGTITQDEHDAMLQTHERAVR 128
                 5566677777777776665555555566555555 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 7.5e-05
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae............karvvfveapastspkel.lqkllsalglpa 66 
                 l++tG +GvGK+ ++ r+a+++   +++a+              +v++v++  s +p+++ +  + s+  + +
  MMETSP1325-20131115|5908_1 442 LILTGGAGVGKSSFVLRWADDFFTTSFIATigvdfkmrsmkwGKEVFKVQIWVSRTPTSIsRPSFTSKCPRHL 514
                 689*******************99999999*******999999999999999999999995555555555444 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.024        41      64     112 ..     516     564 ..     508     572 .. 0.91
   2 ?    5.4   0.0    0.0048       8.3     118     168 ..     618     662 ..     612     668 .. 0.76

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.024
                 E----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGG CS
  PF00025.16  64 DvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeee 112
                 D  G e+ R+l + Y++  ++   + D ++r  +e+  e +k++l++++
  MMETSP1325-20131115|5908_1 516 DTAGPERFRSLNSGYYRGANGCFLMYDKSNRASFEQVDEWFKQVLSKKR 564
                 788999***********************************99998875 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0048
                 EEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHH CS
  PF00025.16 118 llvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkegl 168
                  ++laNK Dl++a+s++e +e+ +   +        +++sa +geg++++ 
  MMETSP1325-20131115|5908_1 618 CVLLANKSDLASAVSTAEGEEKAAALGIP------YFEVSAKTGEGVQNAA 662
                 5789*************999887665555......5666777777777665 PP

>> PF05272.6  Virulence-associated protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00017      0.28      55      89 ..     442     476 ..     436     499 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00017
   PF05272.6  55 liLqGeqgigKstflkkLggewftdsikstegkda 89 
                 liL G+ g+gKs+f+   ++++ft s  +t g d+
  MMETSP1325-20131115|5908_1 442 LILTGGAGVGKSSFVLRWADDFFTTSFIATIGVDF 476
                 89***********************9888777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (744 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.07u 0.34s 00:00:01.41 Elapsed: 00:00:00.56
# Mc/sec: 3127.88
//
Query:       MMETSP1325-20131115|5918_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.09   13.0   5.0          1    9.5   0.2    2.3  2  PF03229.8 Alphavirus glycoprotein J


Domain annotation for each model (and alignments):
>> PF03229.8  Alphavirus glycoprotein J
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.5    0.0016        22      17      80 ..      34      96 ..      22     109 .. 0.63
   2 ?    9.5   0.2   7.5e-05         1      32      71 ..     200     239 ..     185     247 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0016
   PF03229.8 17 tdltpkaalatgttatvgaanaaavanatganatsaaaastiaatvgapptdstvaaetPgpfl 80
                +++t  a + ++ +  + + +  a +++ + ++t ++a + +++t+++ +t s  +   P p +
  MMETSP1325-20131115|5918_1 34 AKITERA-VDSDKAEPMVVEDIEAEPDSISKESTVPSAKACVTSTTASETTLSRDTVPRPPPQP 96
                4444443.33444444455566788899999999887777777777666666655555554444 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 7.5e-05
   PF03229.8  32 tvgaanaaavanatganatsaaaastiaatvgapptdstv 71 
                  ++a+++a+ a++ g+ + s +++sti ++v+ p +ds  
  MMETSP1325-20131115|5918_1 200 DISATTTASGADSDGDRSVSEHTGSTIGSAVTGPLNDSID 239
                 56677778899***********************999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 1427.40
//
Query:       MMETSP1325-20131115|5921_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|5923_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 525.36
//
Query:       MMETSP1325-20131115|5924_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.65
# Mc/sec: 342.86
//
Query:       MMETSP1325-20131115|5925_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.59
# Mc/sec: 288.38
//
Query:       MMETSP1325-20131115|5926_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.046   12.9   0.0      0.048   12.8   0.0    1.1  1  PF04669.8 Polysaccharide biosynthesis


Domain annotation for each model (and alignments):
>> PF04669.8  Polysaccharide biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.5e-06     0.048      77     117 ..      12      51 ..       3      69 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.5e-06
   PF04669.8  77 LlsaakeeeCrpvqnllfsdCkLalrdLPnevykekWDvil 117
                 Ll+a+ +++C ++  l+ +   L l+++P +v++ kWD+i+
  MMETSP1325-20131115|5926_1  12 LLTAS-TDRCVKMWGLDGQPMGLLLQGIPMNVKNPKWDLII 51 
                 44444.6899999999999999***************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|5930_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-05   24.5   0.1    1.3e-05   24.2   0.1    1.1  1  PF12780.2  P-loop containing dynein motor region D4
  ------ inclusion threshold ------
      0.052   13.1   0.0      0.059   12.9   0.0    1.2  1  PF00564.19 PB1 domain


Domain annotation for each model (and alignments):
>> PF12780.2  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1   1.9e-09   1.3e-05       1      30 [.      45      74 ..      45      75 .] 0.96

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 1.9e-09
   PF12780.2  1 ynevnavmnlvlfedavrhvcrinrilesp 30
                yne  a+m+lvlf+ a+ hv+ri ri++ p
  MMETSP1325-20131115|5930_1 45 YNETYAMMDLVLFDMAMFHVARISRIIKNP 74
                8**************************988 PP

>> PF00564.19  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.7e-06     0.059      47      68 ..      19      40 ..       5      58 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 8.7e-06
                EETTCSEEEE-SHHHHHHHHHH CS
  PF00564.19 47 pdedgdlvtitsdeDLkeavee 68
                  + gd+++its++DLk+++++
  MMETSP1325-20131115|5930_1 19 NSAQGDFLPITSTADLKKVMDA 40
                67899*************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.62
# Mc/sec: 289.88
//
Query:       MMETSP1325-20131115|5928_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.66
# Mc/sec: 363.08
//
Query:       MMETSP1325-20131115|5931_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00028   20.3   0.3    0.00044   19.6   0.2    1.3  1  PF03458.8 UPF0126 domain


Domain annotation for each model (and alignments):
>> PF03458.8  UPF0126 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.2   3.3e-08   0.00044      39      79 ..       2      40 ..       2      42 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 3.3e-08
   PF03458.8 39 vgGGilRDvllgeiPvvlrkdeiyalaallgalivvllarl 79
                ++GG++RD+++++   + +  + ya a+ +ga ++v+l++l
  MMETSP1325-20131115|5931_1  2 CFGGVIRDMMCQREARIGM--DSYAFATGVGASTFVALRQL 40
                69***********777776..79***********9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 596.74
//
Query:       MMETSP1325-20131115|5932_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 395.19
//
Query:       MMETSP1325-20131115|5935_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 275.14
//
Query:       MMETSP1325-20131115|5934_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-28   97.7   4.2    5.4e-28   97.4   2.9    1.0  1  PF02460.13 Patched family


Domain annotation for each model (and alignments):
>> PF02460.13  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.4   2.9   3.9e-32   5.4e-28     700     801 ..       3     102 ..       2     104 .. 0.98

  Alignments for each domain:
  == domain 1    score: 97.4 bits;  conditional E-value: 3.9e-32
  PF02460.13 700 LDpismitiimsiGFsvDlsaHiayhfvrsegdetakeRvadalealgwPvvqaalSTilcvlvLlfvdsymvevFvKtvvLvvvlgllHGLiflPilLslf 801
                 +D++s+i+++++iG +vD++aH+ + f++++g  t +eR+ ++l+ +g  v+++++ST+l+vl+L   +sy+ +v ++  +L+vvlgl HG+i+lP+lL+++
  MMETSP1325-20131115|5934_1   3 IDSVSVIQTVIAIGLCVDYAAHVGHCFMTKAG--TKEERITACLADVGAAVLNGGVSTFLAVLLLSQSQSYVFRVLFQQFFLTVVLGLGHGMILLPVLLATV 102
                 59******************************..9****************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 657.82
//
Query:       MMETSP1325-20131115|5936_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.049   11.9   0.8      0.058   11.7   0.5    1.1  1  PF13166.1  AAA domain


Domain annotation for each model (and alignments):
>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.5   4.2e-06     0.058     389     466 ..      12      87 ..       4     117 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.2e-06
   PF13166.1 389 lkeeknkakkklwlhlvaelkedideyekklkklekkinslekeleklekeikklekeikelekelkneeptaeeink 466
                  ++e++++ +k+ + l + +  d+ +   + ++lek +++++++ + + +e++kl+++i+ele++l+  e++a+  ++
  MMETSP1325-20131115|5936_1  12 SQSETQELDSKILSTLGNVA-GDLYNDPSNAEALEKVVQEKTTSGDGAGAELAKLDAQIAELEAQLS-LETAASAATT 87 
                 57899999999977777755.6666778899***********************************9.6666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       648  (0.0473961); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.47
# Mc/sec: 1177.78
//
Query:       MMETSP1325-20131115|5922_1  [L=477]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-13   50.6   0.0    5.9e-13   48.7   0.0    2.0  2  PF10377.4  Autophagy-related protein 11
     0.0083   14.6   1.8     0.0083   14.6   1.3    2.5  2  PF03148.9  Tektin family
  ------ inclusion threshold ------
      0.099   12.6  10.1       0.06   13.3   4.0    2.1  2  PF08702.5  Fibrinogen alpha/beta chain family
       0.32   10.5  12.4        1.7    8.1   1.3    3.2  3  PF04048.9  Sec8 exocyst complex component specific domain
       0.35    9.1  11.3       0.57    8.4   7.8    1.2  1  PF13166.1  AAA domain
       0.84    8.6  18.6        2.2    7.3   0.8    2.3  2  PF13851.1  Growth-arrest specific micro-tubule binding
        1.5    8.0   9.3        1.3    8.2   3.2    2.3  2  PF04799.8  fzo-like conserved region
        1.5    8.6  16.3        4.1    7.2  11.3    1.8  1  PF10146.4  Zinc finger-containing protein
        1.6    8.0  13.2        2.1    7.6   0.6    2.5  2  PF06810.6  Phage minor structural protein GP20
        3.4    6.8  10.3        4.8    6.3   7.1    1.1  1  PF03904.8  Domain of unknown function (DUF334)
        3.6    7.2   9.7        3.5    7.3   2.7    2.4  2  PF07889.7  Protein of unknown function (DUF1664)
        3.6    4.6  22.0        5.1    4.1  15.3    1.1  1  PF12128.3  Protein of unknown function (DUF3584)
        3.8    6.9  16.3        3.8    6.9   5.7    2.2  2  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
        4.4    5.5  10.4        6.6    4.9   7.2    1.3  1  PF04632.7  Fusaric acid resistance protein family
        4.9    6.5  17.5        1.1    8.6   9.6    1.7  1  PF05335.8  Protein of unknown function (DUF745)
        5.4    6.5  20.1        3.9    6.9   8.0    2.2  2  PF03962.10 Mnd1 family
        7.9    6.1  22.9        0.3   10.7   9.5    2.7  2  PF12325.3  TATA element modulatory factor 1 TATA binding
        8.4    5.0  16.1         28    3.3  11.1    1.7  1  PF14362.1  Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF10377.4  Autophagy-related protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.4       3.6   2.7e+03       6      15 ..     233     242 ..     198     286 .. 0.61
   2 !   48.7   0.0   7.8e-16   5.9e-13      31     127 ..     345     472 ..     326     474 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 3.6
   PF10377.4   6 akrfkdveel 15 
                 ++  +++++l
  MMETSP1325-20131115|5922_1 233 VSLTSEINQL 242
                 3333333333 PP

  == domain 2    score: 48.7 bits;  conditional E-value: 7.8e-16
   PF10377.4  31 eklqkekialknfkvgdlvlflptreqa...........................ekkrpwaafna..saprYfLkeessaa.....eelktrewavGrivsieecvvkedkddNpfklsrgtvwYrvkaa 127
                 +  +++kial++f+ g+l+lf p  +++                           +  + + afn+  ++prY++ +essa       +  +r++++G i+++  +++ ++  + +++++ gt +Y + ++
  MMETSP1325-20131115|5922_1 345 RARECRKIALEGFAIGELALFFPVPSKKsasssntsggvlppppqtpqgaaappiH--QNYLAFNVlpKQPRYYIADESSALigrkgVRHFNRKYVLGMIIEKTLHKA-DSAGAARYDIPVGTSYYTLLVN 472
                 344566***************98888876788888888888888887777766431..45********************878887778888****************.6****************98765 PP

>> PF03148.9  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   1.3   1.1e-05    0.0083     312     361 ..     134     183 ..     131     193 .. 0.89
   2 ?   -2.3   8.5       1.5   1.1e+03     219     303 ..     199     284 ..     186     286 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.1e-05
   PF03148.9 312 ElCrDeaqyrLvkEvkeleetieaLkeklaeaeaslkaLeetrakleeei 361
                 + C+D++++++ +E+++l+e i+++k++l++++a+l+     r++le+ +
  MMETSP1325-20131115|5922_1 134 DDCKDRVHEKMSNEIADLKEVIANMKSELEAKDAELNGERLARSALEKRL 183
                 56**********************************99888888888866 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.5
   PF03148.9 219 aSaqLReaidsileqtandlraqadavnealrkrieetkeakekL.enqlkktleeiaeaeknieeLekaikdkeaplkvaqtRLe 303
                 + ++ R++++  l++t+++l + +++ n a+++ ++ t e+++   e++ +++  +++  +++ ee++++++   ++ +    RLe
  MMETSP1325-20131115|5922_1 199 EVQAARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRkEQEDANLVSHLEAHTRHEEEIQRELQRVGHAHEQELRRLE 284
                 55667888999999999999999999999999999999888775414455678889999999999999988887776666666665 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1      0.46   3.5e+02      47      67 ..     143     163 ..     128     202 .. 0.54
   2 ?   13.3   4.0   7.9e-05      0.06      29     121 ..     202     295 ..     196     298 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.46
                 HHHCHCCHHHHHHHHHHHHHH CS
   PF08702.5  47 qlanktkeieelvksikeslk 67 
                 +++n+  + +e++ ++k +l+
  MMETSP1325-20131115|5922_1 143 KMSNEIADLKEVIANMKSELE 163
                 223333333333333333333 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 7.9e-05
                 CCCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  29 kyekdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdndniesavsksl..ekkiililekkilaqesqirvLqevlrsneskiq 121
                  ++++ + ++ + +++L++ +++ +++ + v+s++ ++++ +k+++d  n +s+++ +   e++i   l+++  a+e+++r L e +++ +s ++
  MMETSP1325-20131115|5922_1 202 AARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDA-NLVSHLEAHTrhEEEIQRELQRVGHAHEQELRRLEEAYAHAHSALT 295
                 5678888999999************************99999997766.6667666554014455899******************999888765 PP

>> PF04048.9  Sec8 exocyst complex component specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1     0.042        32      84     110 ..     144     170 ..     130     183 .. 0.77
   2 ?    8.1   1.3    0.0022       1.7      76     134 ..     185     244 ..     181     250 .. 0.89
   3 ?    4.7   0.3     0.024        18      46      83 ..     259     296 ..     245     303 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.042
   PF04048.9  84 sqekirelKesleeakkklstrkkeLk 110
                   ++i +lKe +++ k++l+++++eL+
  MMETSP1325-20131115|5922_1 144 MSNEIADLKEVIANMKSELEAKDAELN 170
                 457788999999999999999998886 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0022
   PF04048.9  76 kilssitesqekirelKesleeakkklstrkkeLkeLnaes.akykevielLdaieelkk 134
                  ++++++   +++ e++ + ++a+ +l t+k eL +  ++    ++ev++l ++i++l+k
  MMETSP1325-20131115|5922_1 185 DVTQQVQLGSSRTDEVQAARQQAEDELATTKRELAKTTERFnSAMQEVVSLTSEINQLRK 244
                 5788899999999***********************99986267899*********9987 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.024
   PF04048.9  46 eelkkqiekaLqevvnehhqgfnssigsYskilssite 83 
                  + +++i+++Lq v ++h+q++ +  ++Y ++ s +t+
  MMETSP1325-20131115|5922_1 259 TRHEEEIQRELQRVGHAHEQELRRLEEAYAHAHSALTQ 296
                 567899****************9999999998888875 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   7.8   0.00075      0.57     312     445 ..     145     285 ..     114     305 .. 0.41

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00075
   PF13166.1 312 seekensefkedveelkaelealeeelek...lekaleeKlkdpfsslelesi.adei....eeinelvdkinelirkhNekidnlkeeknkakkklwlhlvaelkedideyekklkklekkin.slekeleklekeikklek 445
                 s  +e  ++ke ++++k+elea + el++    ++ale++l d+ ++++l s+ +de+    ++ ++++++  ++++k  e+ +   +e+ ++++++++   ++ ++++ +  ++ ++ e++i+ +l++   ++e+e++ le+
  MMETSP1325-20131115|5922_1 145 S--NEIADLKEVIANMKSELEAKDAELNGerlARSALEKRLGDVTQQVQLGSSrTDEVqaarQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDANLVSHLEAHTRHEEEIQrELQRVGHAHEQELRRLEE 285
                 1..12223333344444444444444422222445555555555555555444122222222344444444444444444444444444444444444444444444433222222222222221222222333333444433 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.8    0.0028       2.2     135     187 ..     138     190 ..     128     194 .. 0.81
   2 ?    6.0   7.1    0.0073       5.6      31     111 ..     206     289 ..     197     298 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0028
   PF13851.1 135 qdvqqktelknllLekKlealneelekkeaqLe.evlaaanldpaaleavsekl 187
                 + v++k+ ++   L++ +++++ ele k+a+L+ e la++ l++  l  v++++
  MMETSP1325-20131115|5922_1 138 DRVHEKMSNEIADLKEVIANMKSELEAKDAELNgERLARSALEKR-LGDVTQQV 190
                 568888889999999999999999999999998578888888887.88888777 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0073
   PF13851.1  31 slkeeiaelkkkeekneklmaeikkenkrlkepLkkaeeeve..eLkkklkqyekdkqsLkn.lkaklkelekelknlkwesev 111
                 + ++e+a+ k++ +k+++++++ ++e  +l+ +++++++e e  +L   l+ + ++ ++ ++ l++  +  e+el++l+ ++  
  MMETSP1325-20131115|5922_1 206 QAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEdaNLVSHLEAHTRHEEEIQReLQRVGHAHEQELRRLEEAYAH 289
                 678999999999999999999999999999999999987664338999999999999888762566667888999999887665 PP

>> PF04799.8  fzo-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2      0.15   1.1e+02      98     133 ..     135     170 ..     122     189 .. 0.66
   2 ?    8.2   3.2    0.0018       1.3      97     149 ..     201     252 ..     185     270 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.15
   PF04799.8  98 ncshqvqqelastfarleqqvdvtkkdleeeikele 133
                 +c+  v+ ++++  a l++ + ++k++le + +el+
  MMETSP1325-20131115|5922_1 135 DCKDRVHEKMSNEIADLKEVIANMKSELEAKDAELN 170
                 455666666666666666666666666665555554 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0018
   PF04799.8  97 sncshqvqqelastfarleqqvdvtkkdleeeikelekeiekletiqskakll 149
                   +++q + ela+t  +l ++ +++++ ++ e+ +l++ei++l + q++a l+
  MMETSP1325-20131115|5922_1 201 QAARQQAEDELATTKRELAKTTERFNSAMQ-EVVSLTSEINQLRKEQEDANLV 252
                 45789999****************998886.6789********9999988765 PP

>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  11.3    0.0053       4.1      10     128 ..     148     289 ..     139     407 .. 0.65

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0053
   PF10146.4  10 vdeleklknkiikevealeae...Ekllke.ykkeleeLlkEkmsHvEelrqihaDindlEniikqseeekekrlekinrlyeeylrlkeeidekrkey...lglekLpe..leeeegskiskdrfe..................k 128
                 + +l+ + ++++ e+ea +ae   E+l ++  +k l  +++  +  +     ++a   + E++++ ++ e+ k++e  n +++e++ l +ei++ rke    + +++L+    +eee   i+ + ++                  +
  MMETSP1325-20131115|5922_1 148 IADLKEVIANMKSELEAKDAElngERLARSaLEKRLGDVTQQVQLGSSRTDEVQAARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQedaNLVSHLEAhtRHEEE---IQ-RELQrvghaheqelrrleeayaH 289
                 5555555555555555555443324433321344455555555555555556667777899***********************************998777778888751145555...33.33333445555555555555553 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.6    0.0027       2.1      52      93 ..     140     181 ..     134     191 .. 0.85
   2 ?    4.5   3.7     0.025        19       9      62 ..     205     257 ..     197     297 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0027
   PF06810.6  52 dneeLkkkieklkeknkkkkeeyeaklkdlklnnaielalkk 93 
                  +e+++++i++lke +++ k+e+eak ++l+ ++   +al+k
  MMETSP1325-20131115|5922_1 140 VHEKMSNEIADLKEVIANMKSELEAKDAELNGERLARSALEK 181
                 5799**********************9999988887777776 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.025
   PF06810.6   9 aekgkdiqeeKskldkaeeeldslkeqlkerdkqiedLkkkvkdneeLkkkiek 62 
                 ++ +++++ +K +l+k++e ++s+ +++   + +i++L+k+++d  +L   +e 
  MMETSP1325-20131115|5922_1 205 QQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDA-NLVSHLEA 257
                 556666777777777777777777777777777777777754443.33333333 PP

>> PF03904.8  Domain of unknown function (DUF334)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   7.1    0.0063       4.8       8     147 ..     146     283 ..     139     295 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0063
   PF03904.8   8 nsdkdikknketmntqtrskltgthsskiqksleneelselkkqnklvvkylaeikeqqdlrekelkeikselkkatkdfrdkskkvrndfvdllqkklkrvdaeelkiilrkdvykvreeidrmlrevkrshehyqkrq 147
                 n   d k+   +m+ ++++k +  + +++ +s  ++ l ++ +q +l      e++  ++  e el   k el k+t+ f+   + v     ++ q + ++ da+ +   l+    +  eei+r l+ v ++he   +r 
  MMETSP1325-20131115|5922_1 146 NEIADLKEVIANMKSELEAKDAELNGERLARSALEKRLGDVTQQVQLGSSRTDEVQAARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDANLVSH-LEAH-TRHEEEIQRELQRVGHAHEQELRRL 283
                 445678888889999999999999999999999999*********************************************9999998877777766655555543333.3322.3557999***********9877775 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.4       0.1        78      80     107 ..     137     164 ..     122     189 .. 0.77
   2 ?    7.3   2.7    0.0046       3.5      56     107 ..     197     248 ..     173     284 .. 0.66

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.1
   PF07889.7  80 qkeiskeikeevteiredlsaikedvks 107
                 +  + +++++e+++++e ++++k+++++
  MMETSP1325-20131115|5922_1 137 KDRVHEKMSNEIADLKEVIANMKSELEA 164
                 3457788888888888888888888875 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0046
   PF07889.7  56 seavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvks 107
                  ++v++a+++  +++ +  ++l +++e  ++  +ev ++ +++++++++ + 
  MMETSP1325-20131115|5922_1 197 TDEVQAARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQED 248
                 4566666666666666666666666666666666666666666666666554 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  15.3    0.0067       5.1     604     751 ..     150     297 ..     131     306 .. 0.64

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0067
   PF12128.3 604 eLrerlqaleealqsaeakqkqaeeqlkqlnaeleeakravaeakqalkqarlelqrlkneqqslkdklekalaerkqqaeeqlqkldaelkqleekkkaaleelkddlre.erlekkakwqevegeldeqlaqlkaaieaartqakar 751
                  L+e ++ ++++l+++ a+ +    + ++l++ l++  ++v+  ++   + +  +q++++e  + k++l k  +er ++a +++ +l +e++ql +++++a    + ++++ ++ e + ++q v  + +++l++l++a ++a+++  ++
  MMETSP1325-20131115|5922_1 150 DLKEVIANMKSELEAKDAELNGERLARSALEKRLGDVTQQVQLGSSRTDEVQAARQQAEDELATTKRELAKT-TERFNSAMQEVVSLTSEINQLRKEQEDANLVSHLEAHTrHEEEIQRELQRVGHAHEQELRRLEEAYAHAHSALTQQ 297
                 444555555555555555444444444455555555555555555555555555555566666666776654.5566777888999999999999998887654444444313346788999999999999999999999988887766 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   1.9     0.033        25      71     145 ..     138     210 ..     129     214 .. 0.71
   2 ?    6.9   5.7    0.0049       3.8      71     162 ..     208     295 ..     198     298 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.033
   PF07106.8  71 deelnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtke 145
                 d   +k+ +ei++l+e + ++k+e +  ++el+   + l    l + +  + ++v+  +++ +++++a++++++e
  MMETSP1325-20131115|5922_1 138 DRVHEKMSNEIADLKEVIANMKSELEAKDAELNG--ERLARSALEKRLGDVTQQVQLGSSRTDEVQAARQQAEDE 210
                 5556788888888888777777777777776663..667777788888888888888888777777777776665 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0049
   PF07106.8  71 deelnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtkeeiekvkkeykklkkewk 162
                 + el+  + e+++ +e  +++ qe+ +l +e+++L +e + ++l  +++    + eei+ +L+     + +++++e  ++++ y++++++++
  MMETSP1325-20131115|5922_1 208 EDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDANLVSHLEAHTRHEEEIQRELQR----VGHAHEQELRRLEEAYAHAHSALT 295
                 4577788888999999999999999999999999999999999999999999998888888876....456777788888888888887765 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   7.2    0.0087       6.6     494     619 ..     171     296 ..     139     314 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0087
   PF04632.7 494 aewaarrllralrrdlarlaagraaeararfesrmldrlaqlaprlaaapaasraalrdalaalrvgravlrLrralara.......lpaparaaidavlaalafraraaarkerrlaapaalldaldaalaa 619
                  e+ ar  l++ + d+ ++++  + ++ ++++++ ++   +la+   + +++++++ + + + +++ +++ +Lr+++++a        + +  + i++ l+++       +++e+ l+ ++++ +++ +al +
  MMETSP1325-20131115|5922_1 171 GERLARSALEKRLGDVTQQVQLGSSRT-DEVQAARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDAnlvshleAHTRHEEEIQRELQRVG------HAHEQELRRLEEAYAHAHSALTQ 296
                 466777777777788888888888776.4777777777888888888889999999999999999999999999999999999987666667777888888888......55555555555555555555443 PP

>> PF05335.8  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   9.6    0.0015       1.1      65     179 ..     137     251 ..     135     261 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0015
   PF05335.8  65 KqqlleqlekevreaeavveeeskslqaaeanakaaakaakqaqkqlktlkallkeaqenleniekvaseaqqelaektqLleaAkkrvevlerqlkearkDyektkkaAkkAac 179
                 K  + e++ +e+++ ++v+ +++++l+a +a  +  + a+++ +k+l  +++ ++  ++  ++++++ ++a+ ela  +  l++  +r ++ ++++ +  ++ ++ +k+ + A+ 
  MMETSP1325-20131115|5922_1 137 KDRVHEKMSNEIADLKEVIANMKSELEAKDAELNGERLARSALEKRLGDVTQQVQLGSSRTDEVQAARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDANL 251
                 67778999********************************************************************999999999**********************99999985 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   1.9     0.069        53      64     118 ..     141     189 ..     132     207 .. 0.50
   2 ?    6.9   8.0    0.0051       3.9      65     151 ..     205     294 ..     200     298 .. 0.69

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.069
  PF03962.10  64 kkklkteleklkkeleelkqrikelqaeiekekkkreeteereelleelkeleee 118
                 ++k+ +e++ lk+ ++++k++++  +ae++ e+  r+  e+r      l ++ ++
  MMETSP1325-20131115|5922_1 141 HEKMSNEIADLKEVIANMKSELEAKDAELNGERLARSALEKR------LGDVTQQ 189
                 344445555555555555555555555555444444444444......3333333 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0051
  PF03962.10  65 kklkteleklkkeleelkqrikelqaeiekekkkreet...eereelleelkeleeelkklkkeleklakldpekveklkeetevakesa 151
                 ++ ++el++ k+el+++++r +++ +e+ + +++ ++    +e ++l++ l++  ++ +++++el+ + +  ++++++l+e+  +a++++
  MMETSP1325-20131115|5922_1 205 QQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLrkeQEDANLVSHLEAHTRHEEEIQRELQRVGHAHEQELRRLEEAYAHAHSAL 294
                 5555555555555555555555555554444333222222245569**********************************9999998876 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   1.6      0.51   3.9e+02      17      65 ..     153     201 ..     134     208 .. 0.59
   2 ?   10.7   9.5   0.00039       0.3      10      98 ..     188     278 ..     179     285 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.51
   PF12325.3  17 qlveklsstirrlEgElaslkeelarLekerdeareEivklteeneelk 65 
                 +++ +++s++  ++ El+  +   + Lek    +++++      ++e++
  MMETSP1325-20131115|5922_1 153 EVIANMKSELEAKDAELNGERLARSALEKRLGDVTQQVQLGSSRTDEVQ 201
                 4566677777777777776666666666666666666655555555555 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00039
   PF12325.3  10 ssagpnvqlveklsstirrlEgElaslkeelarLekerdeareEivklteeneelkekkkeleele..keleeleqryettLellGEksEe 98 
                 ++ +  ++ +++ +++ ++ E Ela++k ela+ ++  ++a +E+v lt e ++l++++++ + ++  + +++ e++ +  L+  G   E+
  MMETSP1325-20131115|5922_1 188 QQVQLGSSRTDEVQAARQQAEDELATTKRELAKTTERFNSAMQEVVSLTSEINQLRKEQEDANLVShlEAHTRHEEEIQRELQRVGHAHEQ 278
                 556666777888999999*************************************888776543321123344566666777777776665 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3  11.1     0.036        28     123     229 ..     134     250 ..     127     312 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.036
   PF14362.1 123 aaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGt.ggtgvaGkG.pvykekkealdaaqaeletlkaqldaaqaelean........krkaaleeeraakv 229
                 ++ +++v ++ s+++a+l++ ia++++el++++ae+n ++ ++++ ++   + t+ +  G  +++e ++a+++a+ el+t+k++l+++ ++ +++        ++  +l++e+++++
  MMETSP1325-20131115|5922_1 134 DDCKDRVHEKMSNEIADLKEVIANMKSELEAKDAELNGERLARSALEKRLgDVTQQVQLGsSRTDEVQAARQQAEDELATTKRELAKTTERFNSAmqevvsltSEINQLRKEQEDAN 250
                 556777888899999999999********99999999888777776665565666666665999********************999999999778666666644444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1424  (0.104154); expected 273.4 (0.02)
Passed bias filter:                      576  (0.0421299); expected 273.4 (0.02)
Passed Vit filter:                       103  (0.00753365); expected 13.7 (0.001)
Passed Fwd filter:                        33  (0.00241369); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 1.45u 0.37s 00:00:01.81 Elapsed: 00:00:00.67
# Mc/sec: 1706.06
//
Query:       MMETSP1325-20131115|5940_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.008   15.8   0.8      0.011   15.3   0.5    1.3  1  PF01920.15 Prefoldin subunit


Domain annotation for each model (and alignments):
>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.5   7.9e-07     0.011      26      51 ..      30      55 ..      19      66 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 7.9e-07
                HHHHHHHHHHHHHCTS-TT-EEEEE- CS
  PF01920.15 26 tqlkeielvleelelldedtkvykli 51
                 ++ e++l+ +ele+lded ++++l+
  MMETSP1325-20131115|5940_1 30 DEKGEVQLTDQELEELDEDSDIMRLV 55
                6899********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       385  (0.0281597); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 336.41
//
Query:       MMETSP1325-20131115|5942_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-08   34.0   1.1    2.5e-08   33.9   0.8    1.0  1  PF00106.20 short chain dehydrogenase
     0.0059   16.1   0.2     0.0062   16.1   0.1    1.0  1  PF08659.5  KR domain
  ------ inclusion threshold ------
      0.054   13.1   0.0      0.054   13.1   0.0    1.0  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase
        6.3    6.6   6.1          5    6.9   3.2    1.6  1  PF10389.4  Bacteriophage coat protein B


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.8   7.3e-12   2.5e-08      40     111 ..       7      82 .]       3      82 .] 0.83

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 7.3e-12
                 HHHHHHHHH.H---EEEEEE.--TTSHHHHHHHHHHHHHH----SEEEEE---TT..-TTCCSC.HHHHHHHHHHH CS
  PF00106.20  40 aaeliaele.algaevtvva.cDvadrdalaallaeirkalgpldgvvhnagvld..dgpleeltperlervlapk 111
                 a+e++a+++ a ga + +   +Dva+ ++++ ++++++ ++g+ld++++nag+++  d +  +++++ ++ +++++
  MMETSP1325-20131115|5942_1   7 ANEVAAAINeASGAGTAIGMdVDVANVEQVKGMVDAAESEFGRLDVLFNNAGLMHgqDDDAVNTEEDIWDLTMNVN 82 
                 667778887566665555555********************************99778888888999999888886 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.8e-06    0.0062      38     100 ..       7      70 ..       2      81 .. 0.78

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.8e-06
                 -------HHHHHH----EEEEE--TTSHHHHHHHH----TTS.---EEEE------..---TTT- CS
   PF08659.5  38 deeaeallaelealgaevtvvaaDvadrdavealleeveaeepplrGvvhaAgvlr..dallaem 100
                 ++e +a+++e +  g+ +  +++Dva+ ++v+ +++++e e+++l+  ++ Ag ++  d    ++
  MMETSP1325-20131115|5942_1   7 ANEVAAAINEASGAGTAIG-MDVDVANVEQVKGMVDAAESEFGRLDVLFNNAGLMHgqDDDAVNT 70 
                 5667778888888888776.689*****************************9986324444444 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.6e-05     0.054      44      86 ..      20      62 ..       2      82 .] 0.70

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.6e-05
                -----.----TT-SGGHHHHHHHHHHH.---BSEEEEEEE---T CS
   PF13561.1 44 lpadv.vplDvtseedvselaekvkedlggkiDilvhsianspe 86
                 ++ + + +Dv++ e+v+ +++++ +++ g++D+l + ++ +  
  MMETSP1325-20131115|5942_1 20 AGTAIgMDVDVANVEQVKGMVDAAESEF-GRLDVLFNNAGLMHG 62
                223347899******************9.******999887765 PP

>> PF10389.4  Bacteriophage coat protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   3.2    0.0015         5       5      27 ..       4      26 ..       3      30 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0015
   PF10389.4  5 gidvgdVvtAisaAkadiatiGg 27
                g++  +V++Ai+ A ++ ++iG 
  MMETSP1325-20131115|5942_1  4 GAVANEVAAAINEASGAGTAIGM 26
                89999****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 370.76
//
Query:       MMETSP1325-20131115|5943_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00027   19.8   3.4    0.00036   19.4   2.4    1.2  1  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
      0.014   15.0  12.0      0.015   14.8   8.3    1.1  1  PF08648.7  Protein of unknown function (DUF1777)
        2.3    8.6  21.9        3.1    8.2  15.2    1.2  1  PF12871.2  Pre-mRNA-splicing factor 38-associated hydrophilic C-term


Domain annotation for each model (and alignments):
>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   2.4   7.8e-08   0.00036       2      23 ..      55      76 ..      54      76 .. 0.94

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 7.8e-08
  PF00641.13  2 egdWdCskClvqNfawstkCva 23
                 g+W+C kC++ N ++++ C++
  MMETSP1325-20131115|5943_1 55 PGSWTCGKCGNVNWPTRQICNR 76
                69******************97 PP

>> PF08648.7  Protein of unknown function (DUF1777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   8.3   3.4e-06     0.015      33      58 ..       2      26 ..       1      46 [. 0.51

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.4e-06
   PF08648.7 33 reRereRsrsreRdrarrrsRsrder 58
                r+R+r+R+r+r+Rdr ++r+R+r ++
  MMETSP1325-20131115|5943_1  2 RDRDRDRDRDRDRDR-NNRDRDRGRN 26
                234444444444444.3333333221 PP

>> PF12871.2  Pre-mRNA-splicing factor 38-associated hydrophilic C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  15.2   0.00067       3.1      64      90 ..       2      27 ..       1      33 [. 0.52

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00067
   PF12871.2 64 rdrrrdrsrddrdrdrkerdrdrsrsr 90
                rdr+rdr+r drdrdr +rdrdr r++
  MMETSP1325-20131115|5943_1  2 RDRDRDRDR-DRDRDRNNRDRDRGRNQ 27
                444445554.35555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 341.70
//
Query:       MMETSP1325-20131115|5944_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|5939_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-16   60.1   0.0    2.4e-16   59.7   0.0    1.1  1  PF13489.1 Methyltransferase domain
    1.5e-07   31.7   0.0    2.8e-07   30.8   0.0    1.5  1  PF08241.7 Methyltransferase domain
    2.1e-07   31.4   0.0      4e-07   30.4   0.0    1.4  1  PF12847.2 Methyltransferase domain
    3.8e-07   30.3   0.0    6.1e-07   29.7   0.0    1.3  1  PF08242.7 Methyltransferase domain
    8.9e-06   25.2   0.0    5.3e-05   22.7   0.0    1.9  1  PF13847.1 Methyltransferase domain
  ------ inclusion threshold ------
      0.054   13.4   0.0       0.11   12.3   0.0    1.5  1  PF13659.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   0.0   1.1e-19   2.4e-16      12     152 ..      68     220 ..      57     225 .. 0.79

  Alignments for each domain:
  == domain 1    score: 59.7 bits;  conditional E-value: 1.1e-19
   PF13489.1  12 llerllarlkpggrvLDiGcGtGillellaen...gfdvtgvDpspaaigk.............akqaqksqfdeedaaepagkfdlivarevlehvpdpeellrqiaellkpgGylllstpnasla.sdeafak....wdylvprgthisffsaeslkell 152
                 +l + l      grvLD+G+G+G++ ++ +++     +++ ++p++a++g+              ++ + s      +a+ +++fd i++ +vl+ v+dp ++l++i +llkpgG ++ s++  ++  + +a++k    w+ lv +g h+   + +++ e++
  MMETSP1325-20131115|5939_1  68 ELLKGL-----TGRVLDVGAGGGAYFKYGKRCencVTEYISIEPNRALQGAlrrevdrcqpctfPYRLHASGL----EAVRGEQFDRIILGNVLCEVDDPYSFLKTIDALLKPGGRVFYSEHVLEDGgWKRALQKfcapWWALVSDGCHCDRPTLQTIHEAC 220
                 444333.....59************999966532256********9999988887776654444222222222....678999**************************************977644388888889999************99999999887 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   1.2e-10   2.8e-07       1      94 [.      78     176 ..      78     177 .. 0.81

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 1.2e-10
   PF08241.7   1 LdvGcGtglllealaer..paarvtgvDlseemlatakerlkeegle...lvvadaeel.pfednsfDvvvssevlehledpekalkeiaRvLkpgGllv 94 
                 LdvG+G+g+++++ ++      +++ ++++ +     +++ ++ ++    + +  a  l  ++ ++fD +++ +vl+ ++dp ++lk i  +LkpgG+++
  MMETSP1325-20131115|5939_1  78 LDVGAGGGAYFKYGKRCenCVTEYISIEPNRALQGALRREVDRCQPCtfpY-RLHASGLeAVRGEQFDRIILGNVLCEVDDPYSFLKTIDALLKPGGRVF 176
                 8************99997777888888888885556666666655557853.3334555468899********************************986 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   1.7e-10     4e-07       3     111 ..      75     179 ..      74     180 .. 0.83

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 1.7e-10
   PF12847.2   3 krilDlGcGtGslslelar.lrpgakvvgvDpseeslelarenaksldleerie....llqgdakeelsllerfDavllkgltldallal.deprrvlealpkllkpggrlvies 111
                 +r+lD+G+G G +  +  r +++  ++++++p+++  + +r+ +   d+ + ++    l+ + +  e+  +e+fD ++l++     +l+  d+p ++l+ +  llkpggr++ ++
  MMETSP1325-20131115|5939_1  75 GRVLDVGAGGGAYFKYGKRcENCVTEYISIEPNRALQGALRREV---DRCQPCTfpyrLHASGL--EAVRGEQFDRIILGN-----VLCEvDDPYSFLKTIDALLKPGGRVFYSE 179
                 79***********6666667778888***************999...45555556666777777..7777777******99.....7777799*****************99876 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   2.7e-10   6.1e-07       1      99 []      78     175 ..      78     175 .. 0.82

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 2.7e-10
   PF08242.7   1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirevldnirklLkpgGvl 99 
                 L++G+G G+  ++  ++     ey+ ++++++    a ++  +r++ ++  ++l a  l+   g ++fD ++  nvl  ++d+ ++l+ i +lLkpgG++
  MMETSP1325-20131115|5939_1  78 LDVGAGGGAYFKYGKRCEnCVTEYISIEPNRALQ-GALRREVDRCQPCTFPYRLHASGLEAVRG-EQFDRIILGNVLCEVDDPYSFLKTIDALLKPGGRV 175
                 8*******99999888855577888888888777.77777777777777777777777555544.6********************************85 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   2.3e-08   5.3e-05       6     113 ..      76     187 ..      72     231 .. 0.67

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 2.3e-08
   PF13847.1   6 kvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfenveFiqgdiee.leklle.esfDlvisnevlnaladpqkvlkeiervlkpggrlivesps.....l 113
                 +vlD+G+G G++     +  +   +++ i+ +  a++ A +r +    + ++F      + le  +  e+fD +i  +vl+ + dp ++lk i  +lkpggr++ ++++     +
  MMETSP1325-20131115|5939_1  76 RVLDVGAGGGAYFKYGKRCENCVTEYISIEPNR-ALQGALRR-EVDRCQPCTFPYRLHASgLEA-VRgEQFDRIILGNVLCEVDDPYSFLKTIDALLKPGGRVFYSEHVledggW 187
                 677777777776665553222233477777654.55655552.333333334433333333442.23599*************************************99444433 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     5e-05      0.11       2     113 ..      75     177 ..      74     180 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5e-05
   PF13659.1   2 drvldpgcGsGtfllaalell..aalllgvEldpraaalaarnlaraglaervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrdlydafleaaarllkpgGvlvl 113
                 +rvld+g+G G +  +  +      + +++E +++   + +r+++r    +++++ +   +   e+ r+++fd ++     ++        +d    fl+ + +llkpgG++ +
  MMETSP1325-20131115|5939_1  75 GRVLDVGAGGGAYFKYGKRCEncVTEYISIEPNRALQGALRREVDRC---QPCTFPYRLHASGLEAVRGEQFDRIILGNVLCE-------VDDP-YSFLKTIDALLKPGGRVFY 177
                 69**********9988887634479*******************984...3444444444444445579****9998888884.......3344.49**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       564  (0.0412522); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.52
# Mc/sec: 1341.04
//
Query:       MMETSP1325-20131115|5948_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.3e-05   22.7   0.0    0.00014   22.0   0.0    1.3  1  PF08244.7 Glycosyl hydrolases family 32 C terminal


Domain annotation for each model (and alignments):
>> PF08244.7  Glycosyl hydrolases family 32 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   9.9e-09   0.00014      68      86 .]      11      29 ..       2      29 .. 0.85

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 9.9e-09
                .EEEEEEETTEEEEEETTT CS
   PF08244.7 68 lsLrilvDhssvEvFangG 86
                 +Lr+lvD s++E+Fa+gG
  MMETSP1325-20131115|5948_1 11 TTLRVLVDASIIESFADGG 29
                59***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|5945_1  [L=609]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-52  174.0 174.4    1.5e-07   30.7   5.4   17.5 24  PF07699.8  GCC2 and GCC3
    3.2e-22   77.8 139.3      0.023   14.2   0.4   16.6 16  PF07562.9  Nine Cysteines Domain of family 3 GPCR


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   5.9   2.2e-05      0.15       1      34 [.       6      38 ..       6      51 .. 0.81
   2 !    7.2   2.8   0.00048       3.3       1      36 [.      38      72 ..      38      74 .. 0.73
   3 !   11.1   3.1     3e-05      0.21       1      32 [.      70     100 ..      70     102 .. 0.87
   4 !   17.1   4.0   3.9e-07    0.0027       1      35 [.      86     119 ..      86     121 .. 0.92
   5 !   19.9   1.8   5.2e-08   0.00036       1      35 [.     102     135 ..     102     137 .. 0.89
   6 !   21.3   2.9   1.8e-08   0.00013       1      43 [.     118     159 ..     118     160 .. 0.87
   7 !   23.1   8.3   5.1e-09   3.5e-05       1      48 []     134     180 ..     134     180 .. 0.92
   8 !   16.4   4.3   6.6e-07    0.0045       1      37 [.     150     187 ..     150     191 .. 0.76
   9 !   12.8   2.5   8.7e-06      0.06       1      36 [.     167     201 ..     167     204 .. 0.90
  10 !   21.4   1.9   1.8e-08   0.00012       1      36 [.     183     217 ..     183     219 .. 0.85
  11 !   21.4   5.1   1.8e-08   0.00012       1      48 []     199     245 ..     199     245 .. 0.87
  12 !   12.3   2.4   1.2e-05     0.085       2      42 ..     217     256 ..     215     257 .. 0.82
  13 !   30.7   5.4   2.1e-11   1.5e-07       1      48 []     248     295 ..     248     295 .. 0.99
  14 !   16.1   2.3   8.1e-07    0.0055       3      34 ..     284     315 ..     283     316 .. 0.86
  15 !   14.2   7.9   3.1e-06     0.021       1      48 []     315     360 ..     315     360 .. 0.90
  16 !   25.6   2.1   8.9e-10   6.1e-06       1      37 [.     347     383 ..     347     388 .. 0.89
  17 !   15.8   3.3   9.8e-07    0.0067       1      35 [.     380     415 ..     380     416 .. 0.85
  18 !   24.7   7.8   1.7e-09   1.1e-05       1      48 []     414     461 ..     414     461 .. 0.97
  19 !   11.0   3.9   3.1e-05      0.21       4      35 ..     451     481 ..     450     493 .. 0.77
  20 !   13.3   0.5     6e-06     0.041       1      39 [.     464     503 ..     464     508 .. 0.88
  21 !    9.0   0.5   0.00013      0.91       9      48 .]     490     528 ..     480     528 .. 0.69
  22 !   12.5   0.1     1e-05     0.071       1      43 [.     498     543 ..     498     544 .. 0.86
  23 !   16.5   2.0     6e-07    0.0041       3      35 ..     537     571 ..     536     585 .. 0.79
  24 ?   -2.9   0.0      0.71   4.8e+03      16      34 ..     587     605 ..     586     607 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.2e-05
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppg 34
                Gty  +g+  C++C+ GtY +  g+  C++C  g
  MMETSP1325-20131115|5945_1  6 GTYATAGSPACTACEAGTYAEA-GSSACTKCDGG 38
                99*****************865.5566****987 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.00048
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgtt 36
                G+ ++++   C  C  G Y+ ++ + +C  C +g++
  MMETSP1325-20131115|5945_1 38 GEWSNASATSCGSCNAGRYSGTGAE-SCSDCEAGKY 72
                5667777788999999999876554.4988888765 PP

  == domain 3    score: 11.1 bits;  conditional E-value: 3e-05
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCp 32 
                 G+y+++g   C  C  Gt++n +   +C+ C 
  MMETSP1325-20131115|5945_1  70 GKYSSAGAPSCDSCDGGTFSNAGAR-NCTGCT 100
                 99*****************987655.5*9996 PP

  == domain 4    score: 17.1 bits;  conditional E-value: 3.9e-07
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgt 35 
                 Gt++++g  +C+ C  GtY+n ++ + C aC +g+
  MMETSP1325-20131115|5945_1  86 GTFSNAGARNCTGCTGGTYSNAGSAR-CYACSAGK 119
                 9******************9988777.****9987 PP

  == domain 5    score: 19.9 bits;  conditional E-value: 5.2e-08
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgt 35 
                 Gty+++g+ +C +C+ G Y++  g   C aC+ gt
  MMETSP1325-20131115|5945_1 102 GTYSNAGSARCYACSAGKYSSD-GASACVACGVGT 135
                 9******************865.5666*****996 PP

  == domain 6    score: 21.3 bits;  conditional E-value: 1.8e-08
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsk 43 
                 G+y++ g + C +C+ Gt++   g+ +C++C  gt+ s+ +s+
  MMETSP1325-20131115|5945_1 118 GKYSSDGASACVACGVGTFSLA-GNATCTPCSNGTYASESQST 159
                 99*****************865.5666*******988888887 PP

  == domain 7    score: 23.1 bits;  conditional E-value: 5.1e-09
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 Gt++ +gn +C+pC++GtY +e++++ C  Cp+g t s +g++  s C
  MMETSP1325-20131115|5945_1 134 GTFSLAGNATCTPCSNGTYASESQSTYCATCPSG-TFSRTGASACSTC 180
                 99999*****************************.6688888888888 PP

  == domain 8    score: 16.4 bits;  conditional E-value: 6.6e-07
   PF07699.8   1 Gtylkkgn.kkCepCprGtYkneegqkkCiaCppg.ttT 37 
                 Gty ++++   C  Cp Gt++ ++ +  C  Cp g  +T
  MMETSP1325-20131115|5945_1 150 GTYASESQsTYCATCPSGTFSRTGAS-ACSTCPGGkAST 187
                 88887666589*********977665.5*****993333 PP

  == domain 9    score: 12.8 bits;  conditional E-value: 8.7e-06
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgtt 36 
                 Gt++ +g + C+ Cp G   ++eg+++C  Cp+gt+
  MMETSP1325-20131115|5945_1 167 GTFSRTGASACSTCPGGK-ASTEGSDTCGLCPAGTY 201
                 9****************8.68889999******975 PP

  == domain 10    score: 21.4 bits;  conditional E-value: 1.8e-08
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgtt 36 
                 G+ + +g+ +C +Cp GtY + + +k Ci Cp+g++
  MMETSP1325-20131115|5945_1 183 GKASTEGSDTCGLCPAGTYGDVDDDK-CIDCPAGKY 217
                 667778889**********9887666.******986 PP

  == domain 11    score: 21.4 bits;  conditional E-value: 1.8e-08
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 Gty +  + kC+ Cp G Y + +gq +C++C +g   s  +++  s+C
  MMETSP1325-20131115|5945_1 199 GTYGDVDDDKCIDCPAGKYASDDGQSECTSCAAG-LFSADAATQCSNC 245
                 899999999***********************99.5566677766666 PP

  == domain 12    score: 12.3 bits;  conditional E-value: 1.2e-05
   PF07699.8   2 tylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgs 42 
                 + ++ g+++C+ C  G ++  +  + C +C +g++ + ++s
  MMETSP1325-20131115|5945_1 217 YASDDGQSECTSCAAGLFSADAATQ-CSNCTAGKYSAAEAS 256
                 3466888***********9877766.*******99888777 PP

  == domain 13    score: 30.7 bits;  conditional E-value: 2.1e-11
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 G+y+ ++ ++C+ C+ G+Y ++++   C+aC++g++ s++gs+  +dC
  MMETSP1325-20131115|5945_1 248 GKYSAAEASTCTDCSVGYYMSRQRASACLACGAGSYASSEGSTACTDC 295
                 99********************************************** PP

  == domain 14    score: 16.1 bits;  conditional E-value: 8.1e-07
   PF07699.8   3 ylkkgnkkCepCprGtYkneegqkkCiaCppg 34 
                  +++g+  C+ Cp G+  +++g  +C aC +g
  MMETSP1325-20131115|5945_1 284 ASSEGSTACTDCPAGYHASSTGASSCAACDSG 315
                 56677789*********************976 PP

  == domain 15    score: 14.2 bits;  conditional E-value: 3.1e-06
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 G+y+ +g+  C+ C+ G Y+      +C+ Cp g  Ts +g++  + C
  MMETSP1325-20131115|5945_1 315 GYYSGSGEASCTKCSGGEYSGVNAT-TCQLCPVG-RTSPTGASECDAC 360
                 9******************986655.5*******.7******988888 PP

  == domain 16    score: 25.6 bits;  conditional E-value: 8.9e-10
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttT 37 
                 G  +++g ++C +C  GtY ++eg+ +C++C+ gt+ 
  MMETSP1325-20131115|5945_1 347 GRTSPTGASECDACDAGTYADTEGSASCTSCGGGTFL 383
                 67889999************************99865 PP

  == domain 17    score: 15.8 bits;  conditional E-value: 9.8e-07
   PF07699.8   1 Gtylk.kgnkkCepCprGtYkneegqkkCiaCppgt 35 
                 Gt+l+ +g+  C++Cp G  ++++gq  C +C +g+
  MMETSP1325-20131115|5945_1 380 GTFLNaTGQAACNECPPGRAQSSTGQSACSECEAGK 415
                 788885677999999999999999999999999886 PP

  == domain 18    score: 24.7 bits;  conditional E-value: 1.7e-09
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 G+y+  gn +C+ C+ G +++  gq++C +C +g++ s++gs+s + C
  MMETSP1325-20131115|5945_1 414 GKYSRGGNTECSQCSAGHFQSMKGQTNCSSCAAGRIASSTGSSSCTIC 461
                 99*****************************************98877 PP

  == domain 19    score: 11.0 bits;  conditional E-value: 3.1e-05
   PF07699.8   4 lkkgnkkCepCprGtYkneegqkkCiaCppgt 35 
                 +++g++ C+ C +Gt+   +g+ +C +C +g+
  MMETSP1325-20131115|5945_1 451 SSTGSSSCTICDTGTFAA-AGSASCSKCDSGR 481
                 5688899*********86.56667****9995 PP

  == domain 20    score: 13.3 bits;  conditional E-value: 6e-06
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqk.kCiaCppgttTsk 39 
                 Gt+  +g+  C+ C  G  +ne++   +C   p+gt+T  
  MMETSP1325-20131115|5945_1 464 GTFAAAGSASCSKCDSGRWSNETNGAqNCSLAPKGTYTRV 503
                 899999*************99887666********99975 PP

  == domain 21    score: 9.0 bits;  conditional E-value: 0.00013
   PF07699.8   9 kkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 ++C++ p+GtY   +g  +  +C  g +T+  g++ +  C
  MMETSP1325-20131115|5945_1 490 QNCSLAPKGTYTR-VGASEPVPCDIGYYTDTVGASEQMPC 528
                 6888888888865.44555788888888888888776555 PP

  == domain 22    score: 12.5 bits;  conditional E-value: 1e-05
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppg...ttTskkgsk 43 
                 Gty   g ++  pC +G+Y +++g  +  +C +     tT++kgs+
  MMETSP1325-20131115|5945_1 498 GTYTRVGASEPVPCDIGYYTDTVGASEQMPCSALdslLTTLEKGST 543
                 788888888889**************98999887777899999997 PP

  == domain 23    score: 16.5 bits;  conditional E-value: 6e-07
   PF07699.8   3 ylkkgnkkCepCprGtYk..neegqkkCiaCppgt 35 
                  l+kg+ +C +C  G +   + eg+++C +Cp g 
  MMETSP1325-20131115|5945_1 537 TLEKGSTTCDACLSGHFIeyDDEGSVSCRNCPEGA 571
                 6889999**********623667777******984 PP

  == domain 24    score: -2.9 bits;  conditional E-value: 0.71
   PF07699.8  16 rGtYkneegqkkCiaCppg 34 
                 +G+ + +++++  ++Cp+ 
  MMETSP1325-20131115|5945_1 587 TGYWRTSSNSDAVLECPDP 605
                 5777778888888899986 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   1.5   9.4e-06     0.064      27      54 .]      15      41 ..       1      41 [. 0.83
   2 !    8.0   0.9    0.0003         2      27      54 .]      47      73 ..      46      74 .. 0.90
   3 !    9.4   0.6   0.00011      0.76      28      53 ..      80     104 ..      79     105 .. 0.88
   4 !    8.4   0.4   0.00023       1.6      28      52 ..     112     135 ..     110     137 .. 0.87
   5 !   14.0   2.8   3.9e-06     0.027      27      53 ..     143     169 ..     143     170 .. 0.93
   6 !    7.6   0.6   0.00041       2.8      28      52 ..     177     200 ..     175     202 .. 0.89
   7 !   14.1   0.7   3.8e-06     0.026      27      51 ..     208     232 ..     208     235 .. 0.91
   8 !   10.3   2.0   5.6e-05      0.38      27      52 ..     241     265 ..     241     268 .. 0.87
   9 !   14.2   0.4   3.4e-06     0.023      28      52 ..     275     299 ..     273     302 .. 0.93
  10 !    9.0   3.6   0.00014      0.97      27      53 ..     324     349 ..     307     350 .. 0.74
  11 !   10.4   1.3   5.2e-05      0.36      27      49 ..     356     378 ..     355     382 .. 0.92
  12 !   10.9   5.7   3.8e-05      0.26       7      52 ..     392     431 ..     388     433 .. 0.86
  13 !   13.3   5.4   6.5e-06     0.044       5      52 ..     424     465 ..     421     467 .. 0.89
  14 !    8.6   0.5    0.0002       1.3      27      52 ..     473     499 ..     472     501 .. 0.89
  15 ?   -3.2   0.0      0.95   6.5e+03      30      48 ..     510     528 ..     509     530 .. 0.64
  16 !    4.8   1.9    0.0031        21      27      51 ..     544     570 ..     537     573 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 9.4e-06
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeqws 54
                 C+ C++g++ +  ++  C+kC+ ++ws
  MMETSP1325-20131115|5945_1 15 ACTACEAGTYAE-AGSSACTKCDGGEWS 41
                6*********98.8899**********8 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0003
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeqws 54
                +C +C++g +s  t++ +C +C+ +++s
  MMETSP1325-20131115|5945_1 47 SCGSCNAGRYSG-TGAESCSDCEAGKYS 73
                599********9.8899*****998875 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.00011
   PF07562.9  28 CvpCpegeisnetdettCkkCpeeqw 53 
                 C +C+ g++sn  ++ +C+ C+ +++
  MMETSP1325-20131115|5945_1  80 CDSCDGGTFSN-AGARNCTGCTGGTY 104
                 ***********.8899*****98766 PP

  == domain 4    score: 8.4 bits;  conditional E-value: 0.00023
   PF07562.9  28 CvpCpegeisnetdettCkkCpeeq 52 
                 C  C++g++s+ +++  C++C  ++
  MMETSP1325-20131115|5945_1 112 CYACSAGKYSS-DGASACVACGVGT 135
                 **********9.7899*****8776 PP

  == domain 5    score: 14.0 bits;  conditional E-value: 3.9e-06
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C+pC++g++ +e+++t C +Cp+++ 
  MMETSP1325-20131115|5945_1 143 TCTPCSNGTYASESQSTYCATCPSGTF 169
                 6**********************9876 PP

  == domain 6    score: 7.6 bits;  conditional E-value: 0.00041
   PF07562.9  28 CvpCpegeisnetdettCkkCpeeq 52 
                 C  Cp g+ s+ ++++tC  Cp ++
  MMETSP1325-20131115|5945_1 177 CSTCPGGKAST-EGSDTCGLCPAGT 200
                 *********99.7799*****9875 PP

  == domain 7    score: 14.1 bits;  conditional E-value: 3.8e-06
   PF07562.9  27 dCvpCpegeisnetdettCkkCpee 51 
                 +C++Cp+g++ + +++ +C++C  +
  MMETSP1325-20131115|5945_1 208 KCIDCPAGKYASDDGQSECTSCAAG 232
                 6*********************876 PP

  == domain 8    score: 10.3 bits;  conditional E-value: 5.6e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeq 52 
                 +C +C++g++s   ++ tC++C+ ++
  MMETSP1325-20131115|5945_1 241 QCSNCTAGKYSAA-EASTCTDCSVGY 265
                 6***********5.588*****9876 PP

  == domain 9    score: 14.2 bits;  conditional E-value: 3.4e-06
   PF07562.9  28 CvpCpegeisnetdettCkkCpeeq 52 
                 C+ C +g++ +++++t C++Cp ++
  MMETSP1325-20131115|5945_1 275 CLACGAGSYASSEGSTACTDCPAGY 299
                 **********************886 PP

  == domain 10    score: 9.0 bits;  conditional E-value: 0.00014
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C++C+ ge+s   ++ttC+ Cp +++
  MMETSP1325-20131115|5945_1 324 SCTKCSGGEYSG-VNATTCQLCPVGRT 349
                 699*******99.66999****98765 PP

  == domain 11    score: 10.4 bits;  conditional E-value: 5.2e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCp 49 
                 +C  C++g++ +++++ +C++C 
  MMETSP1325-20131115|5945_1 356 ECDACDAGTYADTEGSASCTSCG 378
                 7*********************7 PP

  == domain 12    score: 10.9 bits;  conditional E-value: 3.8e-05
   PF07562.9   7 epCkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeq 52 
                 ++C+pG +++  +g++     C +C++g++s   ++t+C +C+ ++
  MMETSP1325-20131115|5945_1 392 NECPPGRAQSS-TGQS----ACSECEAGKYSR-GGNTECSQCSAGH 431
                 58****99988.8888....89********99.7789*****9876 PP

  == domain 13    score: 13.3 bits;  conditional E-value: 6.5e-06
   PF07562.9   5 CsepCkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeq 52 
                 Cs +C++G+ +++ kg++    +C +C++g i ++t++ +C+ C++++
  MMETSP1325-20131115|5945_1 424 CS-QCSAGHFQSM-KGQT----NCSSCAAGRIASSTGSSSCTICDTGT 465
                 55.6*******99.9999....8*********************9875 PP

  == domain 14    score: 8.6 bits;  conditional E-value: 0.0002
   PF07562.9  27 dCvpCpegeisnet.dettCkkCpeeq 52 
                 +C +C+ g  snet ++ +C  +p+++
  MMETSP1325-20131115|5945_1 473 SCSKCDSGRWSNETnGAQNCSLAPKGT 499
                 5*************9999**9998875 PP

  == domain 15    score: -3.2 bits;  conditional E-value: 0.95
   PF07562.9  30 pCpegeisnetdettCkkC 48 
                 pC+ g + ++ ++ + ++C
  MMETSP1325-20131115|5945_1 510 PCDIGYYTDTVGASEQMPC 528
                 7887777776666665555 PP

  == domain 16    score: 4.8 bits;  conditional E-value: 0.0031
   PF07562.9  27 dCvpCpegeisnet..dettCkkCpee 51 
                 +C  C  g++ + +  ++++C++Cpe+
  MMETSP1325-20131115|5945_1 544 TCDACLSGHFIEYDdeGSVSCRNCPEG 570
                 6999***9999988345679*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       562  (0.0411059); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 2.12u 0.35s 00:00:02.47 Elapsed: 00:00:01.20
# Mc/sec: 1216.15
//
Query:       MMETSP1325-20131115|5951_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 574.13
//
Query:       MMETSP1325-20131115|5952_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      390  (0.0285255); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|5955_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-10   38.7   4.8     0.0018   18.0   0.0    3.4  4  PF13516.1  Leucine Rich repeat
    4.2e-05   22.9   0.0        0.3   10.6   0.0    2.2  2  PF12799.2  Leucine Rich repeats (2 copies)
    6.3e-05   22.3   0.1        1.3    9.1   0.0    3.3  2  PF00560.28 Leucine Rich Repeat
    0.00072   19.1   0.1       0.66    9.6   0.0    2.0  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.016   15.1   0.0         11    6.6   0.0    3.0  3  PF13504.1  Leucine rich repeat
      0.056   12.9   2.2        2.6    7.4   0.2    2.1  2  PF04528.8  Adenovirus early E4 34 kDa protein conserved region


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       3.1   7.2e+03      12      23 ..       3      14 ..       1      15 [. 0.67
   2 !   18.0   0.0   7.8e-07    0.0018       1      23 [.      17      39 ..      17      40 .. 0.94
   3 !    6.0   0.1    0.0061        14       1      23 [.      42      65 ..      42      66 .. 0.89
   4 !   15.6   0.0   4.6e-06     0.011       1      23 [.      68      91 ..      68      92 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 3.1
   PF13516.1 12 NqigdeGlsaLa 23
                 +i d  + aLa
  MMETSP1325-20131115|5955_1  3 SNIPDAAVIALA 14
                467777777887 PP

  == domain 2    score: 18.0 bits;  conditional E-value: 7.8e-07
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaLa 23
                + nLt+++L+++ i+d  + aLa
  MMETSP1325-20131115|5955_1 17 CANLTTINLGRCAITDAAVIALA 39
                77*****************9998 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.0061
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + nL +++L +++ ++d  + aLa
  MMETSP1325-20131115|5955_1 42 CANLITIHLIDCDnLTDAAVIALA 65
                779*********76****999998 PP

  == domain 4    score: 15.6 bits;  conditional E-value: 4.6e-06
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + nLt++dLs+++ ++d  + aLa
  MMETSP1325-20131115|5955_1 68 CANLTTIDLSGCDdVTDAAVIALA 91
                77**********88*****99998 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00015      0.35      23      42 ..      17      36 ..       3      39 .. 0.82
   2 !   10.6   0.0   0.00013       0.3       2      35 ..      44      80 ..      43      90 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00015
   PF12799.2 23 LpnLktLnLsnNpisdlsaL 42
                + nL+t+nL ++ i+d  ++
  MMETSP1325-20131115|5955_1 17 CANLTTINLGRCAITDAAVI 36
                789***********997654 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00013
   PF12799.2  2 nLevLdLsnN.nIkdlppela...nLpnLktLnLsnNp 35
                nL ++ L+++ n++d    +a    + nL+t++Ls++ 
  MMETSP1325-20131115|5955_1 44 NLITIHLIDCdNLTDAAV-IAlatHCANLTTIDLSGCD 80
                889999999878999665.44335899*********94 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1    0.0016       3.6       1      15 [.      19      38 ..      19      66 .. 0.76
   2 !    9.1   0.0   0.00059       1.3       1      13 [.      70      83 ..      70      91 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0016
                TESEEEETSSBCBC.....H CS
  PF00560.28  1 nLeeLdLsgNnlts.....l 15
                nL++++L ++ +t+     l
  MMETSP1325-20131115|5955_1 19 NLTTINLGRCAITDaaviaL 38
                89999***999997666552 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00059
                TESEEEETSS.BCB CS
  PF00560.28  1 nLeeLdLsgN.nlt 13
                nL+++dLsg+  +t
  MMETSP1325-20131115|5955_1 70 NLTTIDLSGCdDVT 83
                8*********7777 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0     0.002       4.6      23      39 ..      16      32 ..      10      42 .. 0.85
   2 !    9.6   0.0   0.00029      0.66       2      35 ..      44      79 ..      43      85 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.002
   PF13855.1 23 glsnLkvLdLsgnnlks 39
                ++ nL++++L++++++ 
  MMETSP1325-20131115|5955_1 16 HCANLTTINLGRCAITD 32
                79999999999999986 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00029
   PF13855.1  2 nLkeLdLsnN.rlkvipdgaFk.glsnLkvLdLsgn 35
                nL +++L ++ +l++ +  a+  ++ nL+++dLsg+
  MMETSP1325-20131115|5955_1 44 NLITIHLIDCdNLTDAAVIALAtHCANLTTIDLSGC 79
                788899998878999999887779999999999976 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.021        47       2      15 ..      19      32 ..      18      36 .. 0.91
   2 ?   -0.6   0.0       1.2   2.7e+03       2      14 ..      44      57 ..      43      59 .. 0.71
   3 ?    6.6   0.0    0.0047        11       2      13 ..      70      82 ..      69      86 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.021
   PF13504.1  2 nLkeLdLsgnrLts 15
                nL++ +L ++ +t+
  MMETSP1325-20131115|5955_1 19 NLTTINLGRCAITD 32
                8*********9985 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 1.2
   PF13504.1  2 nLkeLdLsgnr.Lt 14
                nL + +L +++ Lt
  MMETSP1325-20131115|5955_1 44 NLITIHLIDCDnLT 57
                56667788887787 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0047
   PF13504.1  2 nLkeLdLsgnr.L 13
                nL++ dLsg++  
  MMETSP1325-20131115|5955_1 70 NLTTIDLSGCDdV 82
                9*********755 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.2    0.0012       2.6      77     113 ..       7      43 ..       2      51 .. 0.82
   2 ?    5.6   0.1    0.0043       9.9      72     106 ..      53      87 ..      48      95 .] 0.81

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0012
   PF04528.8  77 nnlvvlvCksCaelseisvrcCarrtrellrralkll 113
                 +  v+ + ++Ca+l+ i++ +Ca    +++  a ++ 
  MMETSP1325-20131115|5955_1   7 DAAVIALATHCANLTTINLGRCAITDAAVIALATHCA 43 
                 567899999**************98888888777765 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0043
   PF04528.8  72 lkgllnnlvvlvCksCaelseisvrcCarrtrell 106
                 ++ l++  v+ + ++Ca+l+ i ++ C   t + +
  MMETSP1325-20131115|5955_1  53 CDNLTDAAVIALATHCANLTTIDLSGCDDVTDAAV 87 
                 67788899999****************88776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 484.37
//
Query:       MMETSP1325-20131115|5958_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00034   19.3   0.2    0.00036   19.2   0.1    1.1  1  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1   2.7e-08   0.00036      10      62 ..      25      78 ..      11      79 .] 0.72

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 2.7e-08
  PF07690.11 10 larsilgpalplalaedlgispseigwlltlyslgyaiasllaGrlsdr.fGrr 62
                  ++i+++++  +la+d g+ +  +  + tl+++g++ +++++G +++r f rr
  MMETSP1325-20131115|5958_1 25 VPWGIINTFMNDYLAQDKGLGVMKATAVQTLFGIGSLGGQIVGGQWGQRlFNRR 78
                456777777777777777777777777777777777777777777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 386.35
//
Query:       MMETSP1325-20131115|5959_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-14   53.2   0.0    2.1e-14   53.1   0.0    1.0  1  PF13015.1 Glucosidase II beta subunit-like protein


Domain annotation for each model (and alignments):
>> PF13015.1  Glucosidase II beta subunit-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.0   1.5e-18   2.1e-14      81     133 ..       2      53 ..       1      70 [. 0.88

  Alignments for each domain:
  == domain 1    score: 53.1 bits;  conditional E-value: 1.5e-18
   PF13015.1  81 yekGakCWnGPvRsaiveveCGdenelvsvseaekCeYllkvkspaaCsnvll 133
                 +++G +CWnGP Rs  v + C  e++l  v e+  CeY +k  +paaC+    
  MMETSP1325-20131115|5959_1   2 FKHGDHCWNGPSRSLRVSLFCAAEEKLSEVDEPSTCEYVMKFGTPAACDLA-H 53 
                 899*********************************************543.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 357.19
//
Query:       MMETSP1325-20131115|5961_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-11   41.9   0.0    7.1e-11   41.7   0.0    1.0  1  PF00150.13 Cellulase (glycosyl hydrolase family 5)
    6.4e-05   21.2   0.0    7.2e-05   21.0   0.0    1.0  1  PF00232.13 Glycosyl hydrolase family 1
     0.0039   16.2   0.0     0.0047   15.9   0.0    1.1  1  PF02449.10 Beta-galactosidase
  ------ inclusion threshold ------
      0.018   14.2   0.0      0.023   13.9   0.0    1.1  1  PF01301.14 Glycosyl hydrolases family 35
      0.054   12.6   0.0      0.055   12.6   0.0    1.1  1  PF01261.19 Xylose isomerase-like TIM barrel


Domain annotation for each model (and alignments):
>> PF00150.13  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   2.6e-14   7.1e-11      13      85 ..      21      92 ..       8      98 .. 0.86

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 2.6e-14
                GCST-SSGCSHHHHHHHHHHH--SEEEEEEEHGGGG-STTTTC--HHHHHHHHHHHHHHHTTT-EEEEEEEES CS
  PF00150.13 13 lstswgnpyttkalidevkdagfntvRlpvswgelvennpdykvdenslerveevvkyakenglyvildiHse 85
                 +++  ++  ++a id++k++g +t+Rl v+w + ++ ++d   d++ l+r++++++++++ng+ v+ld H +
  MMETSP1325-20131115|5961_1 21 SNSCVACTTFNQADIDHIKEMGWDTIRLGVAWAGAQPRDEDA-LDPAFLQRLHAILDLCDDNGINVLLDNHGD 92
                44455555568999******************9999999997.****************************86 PP

>> PF00232.13  Glycosyl hydrolase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   2.6e-08   7.2e-05      44     115 ..      17      85 ..       2      90 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 2.6e-08
                 S--------TT-HHHHHHHHHHHHHH----EEEEE--HHHHSS------------HHHHHHHHHHHH---EE CS
  PF00232.13  44 vlegsagdvacdsYhrykeDvellkelgvkayrfSiaWsRilPkGkegeineaGldyYdrLidelleagiep 115
                   + s++ vac  +++  +D++ +ke+g +++r+ +aW+   P+  e  +++a l+  + ++d + ++gi+ 
  MMETSP1325-20131115|5961_1  17 ECQASNSCVACTTFNQ--ADIDHIKEMGWDTIRLGVAWAGAQPRD-EDALDPAFLQRLHAILDLCDDNGINV 85 
                 4556677899999986..79************************6.***********************985 PP

>> PF02449.10  Beta-galactosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.7e-06    0.0047      13      66 ..      32      88 ..      26      97 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.7e-06
                HHHHHHHHH----EEE-----HHHH-S-.--------...HHHHHHHHHC---EEE-- CS
  PF02449.10 13 eedirlmkeaglnvvrlgifaWaklePe.egkydFew...LdevldllekagikviLa 66
                + di+ +ke+g +++rlg +aWa  +P+ e++ d ++   L  +ldl  ++gi+v+L 
  MMETSP1325-20131115|5961_1 32 QADIDHIKEMGWDTIRLG-VAWAGAQPRdEDALDPAFlqrLHAILDLCDDNGINVLLD 88
                789*************99.69******73778998885567889***********995 PP

>> PF01301.14  Glycosyl hydrolases family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.5e-06     0.023      29      81 ..      34      87 ..      26      89 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 8.5e-06
  PF01301.14 29 rlkkakalGlnaietYveWnlhepeegq.ydfegeldlvkFiklaqeaglyvil 81
                 ++++k++G ++i++ v+W+  +p++++  d +  + l++ ++l++++g++v+l
  MMETSP1325-20131115|5961_1 34 DIDHIKEMGWDTIRLGVAWAGAQPRDEDaLDPAFLQRLHAILDLCDDNGINVLL 87
                5889*******************98776488888899*************9987 PP

>> PF01261.19  Xylose isomerase-like TIM barrel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     2e-05     0.055      73     134 ..      32      92 ..       3      98 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2e-05
                 HHHHHHHHH---EEEEEE-SS.SS--HHCHHHHHH.HHHHHHHHHHHHHHHTT-EEEEE--ST CS
  PF01261.19  73 kraielAkrlGaplvvvhpGgagagakgseaeale.rlaealnelaeyaeeaGvklaiEnhpg 134
                 +  i+  k++G +++ +++ +  aga+  +++al+  +  +l+++++ ++++G+ +++ nh  
  MMETSP1325-20131115|5961_1  32 QADIDHIKEMGWDTIRLGVAW--AGAQPRDEDALDpAFLQRLHAILDLCDDNGINVLLDNHGD 92 
                 55688889*********9883..45555555555527889********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 435.70
//
Query:       MMETSP1325-20131115|5946_1  [L=537]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-21   75.8   0.0    5.1e-21   75.2   0.0    1.3  1  PF03464.10 eRF1 domain 2
    9.7e-10   38.5   0.0    3.8e-05   23.7   0.0    2.5  2  PF03465.10 eRF1 domain 3
     0.0059   16.7   0.4     0.0059   16.7   0.3    2.4  3  PF10116.4  Protein required for attachment to host cells


Domain annotation for each model (and alignments):
>> PF03464.10  eRF1 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.0   1.1e-24   5.1e-21       2     131 ..     137     266 ..     136     268 .. 0.92

  Alignments for each domain:
  == domain 1    score: 75.2 bits;  conditional E-value: 1.1e-24
                 EEEEEETCCEEEEEEE-...SS-EEEEEEEE-G.GG-S----HHHHHH.....HHHHHHHHHHHHHHHHH...HTTT-SEEEEEE---HHHHHHHHHHHHHHHHTCCCEEEEE-SSSSGGGHHHHHHSTHHHHHH CS
  PF03464.10   2 vglvvldegealiallk...gsgieilekievslPkKhgrGgqsarrfe..reekreeflkkvaeaakeaFivdkdkvkgiilaGpGfaKeellesllldaelkkkkvivlvdvsyggeaGlnevlekpavakvl 131
                 +++vv+d++ a +a+ +   g+ +++l++++++  ++ +rGgqsa rf+  r++ +  f+++vae  +    + +d+v g++laGp+++K  l+es  l ++l++ kv+ +v++s+gg+ +++e+l++   a++l
  MMETSP1325-20131115|5946_1 137 FAVVVIDGQSAVFATARgpeGEAVKVLKTVTTHNRGRCRRGGQSALRFDriRDQVEAAFVREVAEVSNAL--FPSDEVAGVLLAGPANMKHLLAESSALAKPLQS-KVVATVETSQGGRTAVSEALRR--GAEAL 266
                 89************9762226899**********9*********************************99..689*****************************9.9********************9..65555 PP

>> PF03465.10  eRF1 domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   3.1e-05      0.14       4      30 ..     274     301 ..     271     305 .. 0.89
   2 !   23.7   0.0   8.4e-09   3.8e-05      32     112 ..     357     453 ..     350     454 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.1e-05
                 HHHHHHHHHHHHHT.TCSSEE---HHHH CS
  PF03465.10   4 ekklleefleelak.dtgkavYGveevl 30 
                 e+++l ef+++l++ dt ++vYG++e+l
  MMETSP1325-20131115|5946_1 274 EQSVLVEFFSKLQQdDTSRVVYGIKETL 301
                 88999********98899********97 PP

  == domain 2    score: 23.7 bits;  conditional E-value: 8.4e-09
                 HHHTT-EEEEEEEHHHHTSSSHHHHHS.................---.HHHHHH...HHHHHHHHHHTT-EEEEE-TTSTTHHHH.HHG---EEEESS- CS
  PF03465.10  32 alemgAvetLLvseelersrdtlkekv................ketgeelelve..lieelvenveesgakveiisseseeGeqlvkafgGiaaiLRyk 112
                 ale  Av++LLvs ++ +    +                    +++g+ + + +  l+ +l +++ + ga+++ i  ++eeG +++++fgG+aa+  ++
  MMETSP1325-20131115|5946_1 357 ALEAHAVKKLLVSRSVAEGTTYAP--GegtgsrakgvahrgaaEHEGSATCARTatLATHLQDSAAKCGAELVWINVKTEEGVRFTDGFGGLAAFCHWP 453
                 899**********99999863322..2457999999999998844453332222469*************************************97765 PP

>> PF10116.4  Protein required for attachment to host cells
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.3   1.3e-06    0.0059       3     122 ..     139     245 ..     137     248 .. 0.86
   2 ?   -1.5   0.0      0.52   2.4e+03      47      88 ..     380     421 ..     363     429 .. 0.58
   3 ?   -4.2   0.2         3   1.4e+04      36      43 ..     462     469 ..     455     481 .. 0.44

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 1.3e-06
   PF10116.4   3 vvVaDgekarlfrnegdeaeplleveelehpearlkerdlgsdrpGrsadsagqrhsseeetdakeeeeerFarevadyLnkaalkgefeeLvlvAaprfLGelRk..alskevkkrvvgei 122
                 vvV+Dg++a + +++g+e+e  +              + +++++ Gr ++++   +s+    +  ++ e++F reva+  n+   ++e++ ++l+ + ++  +l +  al k+++++vv+++
  MMETSP1325-20131115|5946_1 139 VVVIDGQSAVFATARGPEGEAVK------------VLKTVTTHNRGRCRRGG---QSALRFDRIRDQVEAAFVREVAEVSNALFPSDEVAGVLLAGPANMKHLLAEssALAKPLQSKVVATV 245
                 9****************994444............45567788999966665...39999999*************************************9999753379999999999887 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.52
   PF10116.4  47 pGrsadsagqrhsseeetdakeeeeerFar..evadyLnkaalk 88 
                 pG++  s+++   + ++  a +e  +++ar   +a +L++ a+k
  MMETSP1325-20131115|5946_1 380 PGEGTGSRAK--GVAHRGAAEHEGSATCARtaTLATHLQDSAAK 421
                 5554444333..44455555555555555422467777766665 PP

  == domain 3    score: -4.2 bits;  conditional E-value: 3
   PF10116.4  36 rlkerdlg 43 
                 +++e++ +
  MMETSP1325-20131115|5946_1 462 EEEEQEEA 469
                 22222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.93u 0.35s 00:00:01.28 Elapsed: 00:00:00.84
# Mc/sec: 1531.96
//
Query:       MMETSP1325-20131115|5962_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 425.48
//
Query:       MMETSP1325-20131115|5964_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 415.08
//
Query:       MMETSP1325-20131115|5965_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-18   66.1   0.0      3e-18   65.9   0.0    1.1  1  PF03178.10 CPSF A subunit region


Domain annotation for each model (and alignments):
>> PF03178.10  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.0   2.2e-22     3e-18     250     320 ..       2      68 ..       1      69 [. 0.97

  Alignments for each domain:
  == domain 1    score: 65.9 bits;  conditional E-value: 2.2e-22
  PF03178.10 250 vlygtldGsigvlvPllseeeyrflqsLqqqLrkelkhlggldprafRsyyspkskevknvlDgdllerfl 320
                 ++y+t+ Gs+g+l+P  ++e+ +f+++L++++r+e ++l g+d+ ++Rsy  p    vk v Dg+l+e f+
  MMETSP1325-20131115|5965_1   2 IVYVTVLGSLGALLPSQTREDKDFFTHLEMHMRQEYQPLTGRDHMSYRSYFAP----VKDVADGELCELFT 68 
                 89***************************************************....***********886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|5966_1  [L=389]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      446  (0.0326214); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.42s 00:00:01.13 Elapsed: 00:00:00.55
# Mc/sec: 1694.88
//
Query:       MMETSP1325-20131115|5969_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       100  (0.00731422); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 167.29
//
Query:       MMETSP1325-20131115|5970_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 443.77
//
Query:       MMETSP1325-20131115|5971_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-05   23.5   1.8       0.13   12.0   0.0    2.2  2  PF13424.1  Tetratricopeptide repeat
    0.00067   19.2   6.3       0.18   11.6   0.1    2.4  2  PF07719.12 Tetratricopeptide repeat
     0.0095   15.9   2.8       0.11   12.5   1.9    2.1  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
  ------ inclusion threshold ------
      0.011   15.4   0.1      0.011   15.4   0.1    2.6  2  PF07720.7  Tetratricopeptide repeat
      0.029   13.8   0.5      0.083   12.3   0.3    1.8  1  PF00637.15 Region in Clathrin and VPS
      0.038   13.6   3.8        3.1    7.6   0.0    2.5  2  PF13176.1  Tetratricopeptide repeat
      0.079   12.7   0.2       0.17   11.6   0.0    1.7  2  PF10372.4  Bacterial membrane-spanning protein N-terminus
       0.14   12.7   0.9         11    6.8   0.0    2.4  2  PF13428.1  Tetratricopeptide repeat
       0.17   11.6   4.3       0.52   10.1   0.1    2.6  3  PF04212.13 MIT (microtubule interacting and transport) domain
       0.29   11.7   4.4        1.6    9.3   2.9    2.0  1  PF13432.1  Tetratricopeptide repeat
        0.4   10.5   4.7        2.9    7.8   0.0    2.6  3  PF13374.1  Tetratricopeptide repeat
       0.49    9.9   0.2       0.49    9.9   0.2    2.8  2  PF00515.23 Tetratricopeptide repeat
        1.1    9.7   4.5         37    4.9   1.8    2.4  2  PF13174.1  Tetratricopeptide repeat
        1.2    9.8   8.2        2.9    8.5   1.8    2.3  2  PF08238.7  Sel1 repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00013      0.13      12      36 ..      24      48 ..      19      51 .. 0.79
   2 !   11.2   0.3   0.00025      0.25      44      71 ..      71      97 ..      52      98 .] 0.63

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00013
   PF13424.1 12 alvlrrlgdydeAlelyekalellr 36
                a+ ++  g+yd+A+ +y +a + ++
  MMETSP1325-20131115|5971_1 24 AGYCESIGQYDKARHFYHRAQNYFS 48
                6677788999999999999987765 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00025
   PF13424.1 44 dtaralnnlanlylalgdydeAleylek 71
                + a a + la++++ + + +eA++y+ +
  MMETSP1325-20131115|5971_1 71 N-AAAAYYLARYLEGMTEVQEAINYYAQ 97
                3.66667777777777777777777765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.1   0.00018      0.18       8      28 ..      24      44 ..      17      48 .. 0.79
   2 !    9.1   1.8    0.0012       1.1       1      26 [.      72      97 ..      72      98 .] 0.93

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00018
                HHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12  8 GlayyklgdyeeAleafekAl 28
                +  ++  g+y++A++++ +A 
  MMETSP1325-20131115|5971_1 24 AGYCESIGQYDKARHFYHRAQ 44
                5567778************96 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0012
                HHHHHHHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12  1 aealynlGlayyklgdyeeAleafek 26
                a a y+l++ ++ + + +eA++++ +
  MMETSP1325-20131115|5971_1 72 AAAAYYLARYLEGMTEVQEAINYYAQ 97
                6789********************87 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   1.9   0.00011      0.11      31      82 ..      49      96 ..       6      98 .] 0.66

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00011
                HHHHHHH---HHHHHHHHHCTSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHH CS
   PF12895.2 31 lAlclylngeykrAyellrkleldssslgcryllArcllklgkydeAiavLe 82
                l    + n e  rA +++  +e   ++++++y lAr l+ + +++eAi+ + 
  MMETSP1325-20131115|5971_1 49 LVRIACFNREIPRAKNIV--EET--NNAAAAYYLARYLEGMTEVQEAINYYA 96
                223333344446666666..333..4489*******************9986 PP

>> PF07720.7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.1   1.1e-05     0.011      15      33 ..      31      47 ..      29      48 .. 0.87
   2 ?    3.9   0.1     0.043        42      18      29 ..      89      98 .]      87      98 .] 0.86

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.1e-05
                T-HHHHHHH..HHHHHHH- CS
   PF07720.7 15 kkyqeArelfsYallaild 33
                ++y++Ar++  Y+ +++++
  MMETSP1325-20131115|5971_1 31 GQYDKARHF--YHRAQNYF 47
                8********..66999998 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.043
                HHHHHH..HHHH CS
   PF07720.7 18 qeArelfsYall 29
                qeA+++  Ya++
  MMETSP1325-20131115|5971_1 89 QEAINY--YAQS 98
                8*****..9875 PP

>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   8.5e-05     0.083      77     135 ..      24      82 ..       4      89 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.5e-05
                 HHHHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGGTTTTT---TTHHHHHHHHH CS
  PF00637.15  77 aklcekadlyeeavilykkinefkkaisllkklkdfddaieyakkasdpelweklleal 135
                 a +ce+ + y+ a+  y + +++  ++ ++  + ++++a +++ + ++  +++ l+ +l
  MMETSP1325-20131115|5971_1  24 AGYCESIGQYDKARHFYHRAQNYFSLVRIACFNREIPRAKNIVEETNNAAAAYYLARYL 82 
                 789*************************988889********************99987 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0032       3.1       9      24 ..      27      42 ..      24      62 .. 0.88
   2 ?    6.6   0.8     0.007       6.9       3      24 ..      76      97 ..      73      98 .] 0.89

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0032
   PF13176.1  9 ysrlgdyekAielyer 24
                +++ g+y+kA  +y r
  MMETSP1325-20131115|5971_1 27 CESIGQYDKARHFYHR 42
                6789**********99 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.007
   PF13176.1  3 lnLarlysrlgdyekAielyer 24
                ++Lar  + + + ++Ai++y +
  MMETSP1325-20131115|5971_1 76 YYLARYLEGMTEVQEAINYYAQ 97
                58999999999*********99 PP

>> PF10372.4  Bacterial membrane-spanning protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00017      0.17      47      68 ..      62      83 ..      53      85 .. 0.83
   2 ?   -2.9   0.1       5.8   5.7e+03      57      65 ..      90      98 .]      86      98 .] 0.70

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00017
   PF10372.4 47 lhhllaevqalAssyYLqsYle 68
                 +++++e ++ A++yYL  Yle
  MMETSP1325-20131115|5971_1 62 AKNIVEETNNAAAAYYLARYLE 83
                578899***************8 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 5.8
   PF10372.4 57 lAssyYLqs 65
                +A  yY qs
  MMETSP1325-20131115|5971_1 90 EAINYYAQS 98
                577888886 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.011        11       2      27 ..      18      43 ..      17      51 .. 0.88
   2 ?    4.0   0.5      0.09        88       1      25 [.      72      96 ..      71      98 .] 0.87

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.011
   PF13428.1  2 eallalarallalGdpdeAiallrra 27
                e+   +a +++  G++d+A+  + ra
  MMETSP1325-20131115|5971_1 18 ELIKWWAGYCESIGQYDKARHFYHRA 43
                677789999***********999988 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.09
   PF13428.1  1 peallalarallalGdpdeAiallr 25
                ++a + lar+l+ + +++eAi+++ 
  MMETSP1325-20131115|5971_1 72 AAAAYYLARYLEGMTEVQEAINYYA 96
                5789999****99999999999986 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       6.7   6.6e+03      54      62 ..       6      14 ..       4      16 .. 0.73
   2 ?   10.1   0.1   0.00053      0.52      15      36 ..      27      48 ..      24      51 .. 0.89
   3 ?    1.8   0.9      0.21     2e+02      20      30 ..      87      97 ..      65      98 .] 0.72

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 6.7
                HHHHHHHHH CS
  PF04212.13 54 kieeylkrA 62
                k+eey+++ 
  MMETSP1325-20131115|5971_1  6 KLEEYIAHS 14
                788888765 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00053
                HHHTT-HHHHHHHHHHHHHHHH CS
  PF04212.13 15 aDeagkyeeAlelYkeAlelLl 36
                ++  g+y++A + Y  A++++ 
  MMETSP1325-20131115|5971_1 27 CESIGQYDKARHFYHRAQNYFS 48
                6889****************96 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.21
                -HHHHHHHHHH CS
  PF04212.13 20 kyeeAlelYke 30
                + +eA+++Y +
  MMETSP1325-20131115|5971_1 87 EVQEAINYYAQ 97
                56788888866 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.9    0.0017       1.6      11      56 ..      31      97 ..      28      98 .] 0.88

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0017
   PF13432.1 11 GdydeAlaaleaalala............Pe.........aaeallllaeallrlgrldeAaallra 56
                G+yd+A++ + +a  ++            P+         +a a ++la+ l  + +++eA+ ++++
  MMETSP1325-20131115|5971_1 31 GQYDKARHFYHRAQNYFslvriacfnreiPRakniveetnNAAAAYYLARYLEGMTEVQEAINYYAQ 97
                999*************988888888766655889999999**********************99975 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0     0.003       2.9      11      30 ..      26      45 ..      24      46 .. 0.81
   2 ?   -1.9   0.0       3.2   3.1e+03      17      28 ..      58      69 ..      52      71 .. 0.79
   3 ?    2.9   1.2       0.1     1e+02       2      27 ..      72      97 ..      71      98 .] 0.89

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.003
   PF13374.1 11 alrargryeeAlaleeeala 30
                ++   g+y++A+ ++++a+ 
  MMETSP1325-20131115|5971_1 26 YCESIGQYDKARHFYHRAQN 45
                56667***********9975 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 3.2
   PF13374.1 17 ryeeAlaleeea 28
                +  +A +++ee+
  MMETSP1325-20131115|5971_1 58 EIPRAKNIVEET 69
                567899999986 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.1
   PF13374.1  2 aaalnnLAlalrargryeeAlaleee 27
                aaa+  LA++l  + + +eA +++ +
  MMETSP1325-20131115|5971_1 72 AAAAYYLARYLEGMTEVQEAINYYAQ 97
                799999*****999999999999877 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.2    0.0005      0.49      13      27 ..      29      43 ..      26      45 .. 0.89
   2 ?    0.1   1.3      0.62   6.1e+02      16      24 ..      87      95 ..      72      98 .] 0.70

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0005
                HTT-HHHHHHHHHHH CS
  PF00515.23 13 klgkydeAleyyekA 27
                + g+yd+A  +y +A
  MMETSP1325-20131115|5971_1 29 SIGQYDKARHFYHRA 43
                679***********9 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.62
                -HHHHHHHH CS
  PF00515.23 16 kydeAleyy 24
                + +eA+ yy
  MMETSP1325-20131115|5971_1 87 EVQEAINYY 95
                568999999 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.057        56       6      29 ..      24      46 ..      20      49 .. 0.73
   2 ?    4.9   1.8     0.038        37       2      25 ..      74      97 ..      73      97 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.057
                HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAlealerlike 29
                ++++    g++d+A+  + r  + 
  MMETSP1325-20131115|5971_1 24 AGYCES-IGQYDKARHFYHRAQNY 46
                556655.46******999887665 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.038
                HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  2 AlyklalsyyklgdtdeAlealer 25
                A y+la+ ++ +++ +eA+ ++ +
  MMETSP1325-20131115|5971_1 74 AAYYLARYLEGMTEVQEAINYYAQ 97
                78*****999999********975 PP

>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.2     0.051        49      23      34 ..      32      43 ..      22      45 .. 0.77
   2 ?    8.5   1.8     0.003       2.9       1      33 [.      72      97 ..      72      98 .] 0.82

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.051
   PF08238.7 23 dpekAleWyekA 34
                 ++kA++ y++A
  MMETSP1325-20131115|5971_1 32 QYDKARHFYHRA 43
                389********9 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.003
   PF08238.7  1 aeAqynLGlyymylnGlgGvpkdpekAleWyek 33
                a A+y+L++y+   +G   +    ++A+ +y +
  MMETSP1325-20131115|5971_1 72 AAAAYYLARYL---EGM--T--EVQEAINYYAQ 97
                68******988...**7..6..4679**99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.71
# Mc/sec: 330.76
//
Query:       MMETSP1325-20131115|5973_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   17.5   0.0     0.0028   16.7   0.0    1.4  1  PF00036.27 EF hand
  ------ inclusion threshold ------
       0.03   14.3   0.0      0.049   13.6   0.0    1.3  1  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0     4e-07    0.0028       4      28 ..      28      52 ..      26      53 .. 0.93

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 4e-07
                HHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  4 eaFkefDkDgdGkIsfeEfkealkk 28
                ++++++D+ gd +Is  E+++++k+
  MMETSP1325-20131115|5973_1 28 KMIQKMDTKGDHRISPTEYQQFVKA 52
                79*******************9985 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   7.1e-06     0.049      44      65 ..      28      49 ..       9      50 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 7.1e-06
   PF13499.1 44 yifkelDkngdGvlsfeEflqa 65
                + ++++D+ gd ++s +E+ q+
  MMETSP1325-20131115|5973_1 28 KMIQKMDTKGDHRISPTEYQQF 49
                5599***************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 369.87
//
Query:       MMETSP1325-20131115|5974_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-12   45.1   0.1      6e-12   44.8   0.0    1.1  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   4.4e-16     6e-12     258     327 ..       1      73 [.       1      79 [. 0.91

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 4.4e-16
                 HHHHHHHHHHHHHHHHHHHHHT...TTSS-CGGGSHHHHHTGGCH--.--EEEEEEEE--BGGGHHHHHHHHH CS
  PF00225.18 258 EaanINkSLlaLgrvIsaLaen..kkskhvpYRdSkLTrlLqdsLgg.nsktlmivtvspsssnleetlstLr 327
                 E+++IN SL aL+++++a a     k+  vp+R S+LT++L +sL   +++ ++i+tvsp  +++e+++ tL+
  MMETSP1325-20131115|5974_1   1 ESTEINASLYALKECVRARAIAlrGKRVKVPFRASNLTKVLMESLVRpEAHLAVIATVSPIPTDTEHSIATLK 73 
                 7899************9866555588*******************88799*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 814.76
//
Query:       MMETSP1325-20131115|5978_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-16   58.0   0.0    7.4e-16   57.9   0.0    1.0  1  PF00069.20 Protein kinase domain
    0.00012   21.1   0.0    0.00014   21.0   0.0    1.0  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   1.1e-19   7.4e-16     181     258 ..       2      79 ..       1      80 [] 0.98

  Alignments for each domain:
  == domain 1    score: 57.9 bits;  conditional E-value: 1.1e-19
                 HHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSG CS
  PF00069.20 181 DvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhp 258
                 D+WslGv++y +l g  pf+ +++++++e++++ilk+++  + + +++ s+e k+l+  ll +dp++R+ta+e+l+hp
  MMETSP1325-20131115|5978_1   2 DMWSLGVVMYIVLAGAHPFDLQNDASDEEVVKRILKGDVVLSGEGWDQVSPEGKQLLVALLSHDPKQRPTATEVLEHP 79 
                 *****************************************************************************8 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0     2e-08   0.00014     187     257 ..       2      77 ..       1      78 [. 0.81

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 2e-08
                 HHHH---HHHHHHTTT-GT...TTTSHHHHHHHHHHTT-BS--...-TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12 187 DvWsfGvllwEiftlgesp...ypglsneevlellkegkrlek...pekcpeelyelmkqCweeepeeRptfkelve 257
                 D+Ws Gv+++ ++  g++p    ++ s+eev++++ +g  +      +++++e ++l+   ++++p++Rpt +e+ e
  MMETSP1325-20131115|5978_1   2 DMWSLGVVMYIVLA-GAHPfdlQNDASDEEVVKRILKGDVVLSgegWDQVSPEGKQLLVALLSHDPKQRPTATEVLE 77 
                 9*********8777.889944445679999*****887776551114678899******************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|5975_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-45  153.8   0.0    2.7e-45  153.5   0.0    1.1  1  PF00071.17 Ras family
    4.8e-18   65.6   0.0    9.3e-18   64.7   0.0    1.4  2  PF08477.8  Miro-like protein
    1.9e-11   43.4   0.0    2.6e-11   42.9   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    1.9e-07   30.9   0.0    3.3e-07   30.1   0.0    1.3  1  PF01926.18 50S ribosome-binding GTPase
    5.3e-07   29.1   0.1    1.3e-06   27.8   0.1    1.6  1  PF00009.22 Elongation factor Tu GTP binding domain
    2.2e-06   26.9   0.0    2.8e-06   26.5   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
      0.004   16.7   0.1      0.016   14.8   0.0    1.9  2  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
  ------ inclusion threshold ------
      0.017   15.1   0.0      0.033   14.2   0.0    1.6  1  PF13401.1  AAA domain
      0.037   13.1   0.0      0.059   12.4   0.0    1.2  1  PF09439.5  Signal recognition particle receptor beta subunit
      0.068   12.7   0.2       0.16   11.4   0.0    1.9  2  PF01637.13 Archaeal ATPase
      0.091   11.8   0.9        4.1    6.4   0.7    2.5  1  PF02421.13 Ferrous iron transport protein B


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.5   0.0   2.2e-48   2.7e-45       4     158 ..       3     168 ..       2     172 .. 0.96

  Alignments for each domain:
  == domain 1    score: 153.5 bits;  conditional E-value: 2.2e-48
                 EE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGH..HHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST...TTSSEEEE---TTGGG......G-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHH CS
  PF00071.17   4 lvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefk..slrslyyrdaegillvyditsresfenvkkwveeikrvae...envpivLvGnKvDlee......kravsteegeelakelglkfletSAktnenveeafeellr 158
                 ++G s+vGKtsl+ r+ ++ +++e  +T g+df tk+i ++++ + l+iwDTAGqe+f+  +l s++yr+a+g++lvyd+t+++sfe+v++w ee+ +  +   +++p+v+vGnKvD+e+      ++ v++ee+ +++++ g+ ++etSAk+n++v+ a+e+++ 
  MMETSP1325-20131115|5975_1   3 VLGCSNVGKTSLMKRYCNNAYSDERRATTGADFATKRIVLQDTPMVLQIWDTAGQERFHhgTLGSAFYRGADGAVLVYDVTNAKSFEQVEQWREELMQRIDsdpDQFPVVVVGNKVDMESnvamdgTEGVDKEEVLRWCSDRGIGHIETSAKENTGVQAAMEAIAM 168
                 79********************************************************844699**********************************99999989**************9****99*********************************999875 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.0   7.5e-21   9.3e-18       4     119 .]       3     119 ..       2     119 .. 0.90
   2 ?   -3.4   0.0       9.3   1.1e+04      65      82 ..     154     172 ..     131     180 .. 0.58

  Alignments for each domain:
  == domain 1    score: 64.7 bits;  conditional E-value: 7.5e-21
   PF08477.8   4 vvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehell..lkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                 v+G ++vGK+sl ++++   ++    ++ ++g++ a k ++++     l++wd++g+e++++        + ad+++lvyd+t+ +s+e+v++  ++l +  +++    pv++vgnk D
  MMETSP1325-20131115|5975_1   3 VLGCSNVGKTSLMKRYCNNAYS--DERRATTGADFATKRIVLQDTPMVLQIWDTAGQERFHHGTLGSafYRGADGAVLVYDVTNAKSFEQVEQWREELMQRIDSDPDqFPVVVVGNKVD 119
                 8999**************9999..999999999999888877777777*************98655457************************999998887777777*********98 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 9.3
   PF08477.8  65 kehell.lkkadaillvyd 82 
                 ke+  +   + + ++l yd
  MMETSP1325-20131115|5975_1 154 KENTGVqAAMEAIAMLAYD 172
                 3333333444444455554 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   2.1e-14   2.6e-11      19     171 ..       3     166 ..       2     169 .. 0.82

  Alignments for each domain:
  == domain 1    score: 42.9 bits;  conditional E-value: 2.1e-14
                 EE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE..TTEEEEEEE----GGGGG..CGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGT..TSEEEEEEE-TTSTT---HHHHHHHTTTTTST...SSSEEEEEEBTTTTB--HHHHHHH CS
  PF00025.16  19 llGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRp..lWknYfektdavifvvDsadreRleeakeeLkalleeeelk..evallvlaNKqDlpealseeelrellgleelk..gkrkleiqkcsavkgeglkeglewl 171
                 +lG  n GKt ++k++ ++  ++    T+g  f ++++      + +++wD  Gqe+  +  l + +++  d+ + v D+++ + +e+ ++  ++l+++ +    + +++v++NK D+++ +  +  +   + e l+  ++r +  +++sa +++g++ ++e +
  MMETSP1325-20131115|5975_1   3 VLGCSNVGKTSLMKRYCNNAYSDeRRATTGadFATKRIVLqdTPMVLQIWDTAGQERFHHgtLGSAFYRGADGAVLVYDVTNAKSFEQVEQWREELMQRIDSDpdQFPVVVVGNKVDMESNVAMDGTEGVDKEEVLRwcSDRGIGHIETSAKENTGVQAAMEAI 166
                 6999************9998765456666622667776662255889*********99743389*********************999999999999975554449************99888777666666666666689*****************999876 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   2.6e-10   3.3e-07       4     113 ..       3     116 ..       2     117 .. 0.56

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 2.6e-10
                 EE--TT---HHHHHHHHC.....STCTEETS-TT-SSSESEEEEETTE...EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS.HHHHHHHHHHHHH....H...TCCCEEEEEE CS
  PF01926.18   4 ivGrpNvGKStLinaLtg.....ekaakvsdypgtTrditenevkkek...iilvDtPGiiegasedkeiegikkylekveradvlllvvdasa.vlkeadkellnel....e...akkplilvln 113
                 ++G +NvGK++L+++ ++     e++  ++   + T+ i+ +     +   ++++Dt+G  e+ +++          +  + ad+++lv d+++ +  e++++  +el         + p+++v n
  MMETSP1325-20131115|5975_1   3 VLGCSNVGKTSLMKRYCNnaysdERR-ATTGADFATKRIVLQD----TpmvLQIWDTAGQ-ERFHHGT------LGSAFYRGADGAVLVYDVTNaKSFEQVEQWREELmqriDsdpDQFPVVVVGN 116
                 68***************733332333.4444446677774432....234346******3.3333333......2235559999999999954433333344444444332223445566666665 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.1   1.1e-09   1.3e-06      63     184 ..      42     168 ..       3     172 .. 0.75

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 1.1e-09
                 EET.ESCEEEEEEE----GGGHHHHHHH..HHT-SEEEEEEETTS-.....S-HHHHHHHHHHHHT..T--EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHH CS
  PF00009.22  63 leketkkrlinliDtPGHvdFskevirg..lrvlDgavlvvdaveG.....vepqTeevlrlakkl..gvkiivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaive 184
                 l  +     +++ Dt G + F   ++ +   r +Dgavlv d+++      ve+  ee+++ +++   + +++vv NK+D+  + +    e + ++ + +   +  + +  + +Sa++++g++a +eai  
  MMETSP1325-20131115|5975_1  42 L--QDTPMVLQIWDTAGQERFHHGTLGSafYRGADGAVLVYDVTNAksfeqVEQWREELMQRIDSDpdQFPVVVVGNKVDMESNVAMDGTEGVDKEEVLRWCSD--RGIGHIETSAKENTGVQAAMEAIAM 168
                 3..4777889999************99977899**********96655554666666666666554225669999******98888777777776665555444..37999***************99975 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   2.2e-09   2.8e-06       5     159 ..       4     153 ..       3     177 .. 0.78

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 2.2e-09
   PF04670.7   5 mGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrflg.nlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfq.eileallqyspeakvfvlihKmDlisedereeifeerkeeireeiedleieeleffaTSi 159
                 +G s+ GKtS+ +   +n    + +r ++  d   +++ + +  ++l++wD+ Gqe+f + +l    +  ++  +  + V D++  +  e++e+++ e+++++     +  v v  +K+D+ s+ + + +    kee+ + ++d +i+     +TS+
  MMETSP1325-20131115|5975_1   4 LGCSNVGKTSLMKRYCNNAYSDE-RRATTGADFATKRIVLQDtPMVLQIWDTAGQERFHHGTL---GSAFYRGADGAVLVYDVTNAKSFEQVEQWReELMQRIDSDPDQFPVVVVGNKVDMESNVAMDGTEGVDKEEVLRWCSDRGIG---HIETSA 153
                 899**********9888877666.788888888877776554169***************976...77788888888888899988766777777615666666666677889999******99999999999999999999988844...555555 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.2e-05     0.016       5      33 ..       3      31 ..       2      42 .. 0.90
   2 ?   -1.0   0.0      0.92   1.1e+03      79     102 ..      92     118 ..      62     162 .. 0.57

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.2e-05
                EE-------HHHHHHHHHHHHH------- CS
   PF03205.9  5 vvGpkdsGKTtlieklvnklkergyrvav 33
                v G++++GKT+l+++ +n + ++++r ++
  MMETSP1325-20131115|5975_1  3 VLGCSNVGKTSLMKRYCNNAYSDERRATT 31
                67*******************99999876 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.92
                 ----HHHHHHCS-..-S..-EEEE---S CS
   PF03205.9  79 keadLeallsvls..vD..lvlveGfks 102
                 +++  e+l+++++   D   v+v G k 
  MMETSP1325-20131115|5975_1  92 EQWR-EELMQRIDsdPDqfPVVVVGNKV 118
                 4444.55555554331111244444444 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.6e-05     0.033       9      37 ..       3      37 ..       3     121 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2.6e-05
   PF13401.1  9 vtGesGvGKTtllrrlarqldeeaeaae......k 37
                v G+s vGKT l++r+ ++++  +  a+      +
  MMETSP1325-20131115|5975_1  3 VLGCSNVGKTSLMKRYCNNAYSDERRATtgadfaT 37
                57****************98765555445554442 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.7e-05     0.059       9     124 ..       4     120 ..       3     129 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.7e-05
                 E--TT---HHHHHHHHHSS-------S..S-EEETT-....-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTS CS
   PF09439.5   9 vGlsdsGKTslftrLttdsvkktvtSq..essaalkv.ksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqel 124
                 +G s+ GKTsl++r  ++++ +   +   +  a++++  ++    l++ D  G+e++ +  l +    + + g v v D t + k  ++v  +  e++    + +++ ++++  nK ++
  MMETSP1325-20131115|5975_1   4 LGCSNVGKTSLMKRYCNNAYSDERRATtgADFATKRIvLQDTPMVLQIWDTAGQERFHHGTLGS-AFYRGADGAVLVYDVT-NAKSFEQVEQWREELMQRIDSDPDQFPVVVVGNKVDM 120
                 799***************7776655554255555565456667788999*********999988.6777899999999987.78999999999999999999999*******9999886 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00013      0.16      25      48 ..       3      26 ..       2     114 .. 0.86
   2 ?   -2.5   0.0       2.5   3.1e+03     210     232 ..     201     224 ..     196     225 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00013
                EE--TT---HHHHHHHHHH-..-- CS
  PF01637.13 25 iyGprrsGKTaLlkeileelkekg 48
                ++G  ++GKT+L+k+  ++  + +
  MMETSP1325-20131115|5975_1  3 VLGCSNVGKTSLMKRYCNNAYSDE 26
                79****************995444 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.5
                 ..---HHHHHHHHHHH------TT CS
  PF01637.13 210 l.pgskeefeevysylGGkPkyLv 232
                 l + +ke++ e y+   G +++L 
  MMETSP1325-20131115|5975_1 201 LlETQKEDLLELYERDPGQVQWLS 224
                 445689999999999888888885 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.7    0.0033       4.1     133     164 ..     143     174 ..       2     195 .. 0.55

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0033
                 H----EEEEBCCGTB--HHHHHHHHHHCTCG- CS
  PF02421.13 133 lLgvpvvktvarkkkgieelleaiievaekee 164
                   g+  ++t+a++++g+++ +eai+ +a +++
  MMETSP1325-20131115|5975_1 143 DRGIGHIETSAKENTGVQAAMEAIAMLAYDQQ 174
                 33666777777777777777777765555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       448  (0.0327677); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.60u 0.42s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 1007.36
//
Query:       MMETSP1325-20131115|5979_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-05   21.3   0.1    8.9e-05   21.2   0.1    1.0  1  PF07690.11 Major Facilitator Superfamily
     0.0012   16.9   0.0     0.0014   16.6   0.0    1.0  1  PF03137.15 Organic Anion Transporter Polypeptide (OATP) family


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   1.3e-08   8.9e-05     199     274 ..      26     100 ..       3     105 .. 0.68

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.3e-08
  PF07690.11 199 awklllkppvlwillialllfffvfsglltllplylqevlglspglllaglllgllaligaigalllgrlsdrlgr 274
                 a  +++k++  ++l++a+ + f++++ + ++lp +    +  + +  ++++   +++++ga +++l+gr++dr+ +
  MMETSP1325-20131115|5979_1  26 AVCEICKSRLCMLLFAASSVRFMGTYVFAAFLPRFYAIAFPAD-NMKYSYISAVVVSFGGALSSFLGGRVVDRWEK 100
                 45567777733368889999999***********755555555.4444444466666666666**********976 PP

>> PF03137.15  Organic Anion Transporter Polypeptide (OATP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   2.1e-07    0.0014     296     371 ..      25     100 ..      19     105 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 2.1e-07
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF03137.15 296 kvlkrlltnklfmlvvlasvleslviaglstFlpKylEtqyslsaskAnlliGvvalpaaavgillgGlivkkfkl 371
                 +++ ++ +  l+ml+ +as + +++   +++Flp++    +     k +++++vv+    a++ +lgG +v +++ 
  MMETSP1325-20131115|5979_1  25 EAVCEICKSRLCMLLFAASSVRFMGTYVFAAFLPRFYAIAFPADNMKYSYISAVVVSFGGALSSFLGGRVVDRWEK 100
                 67889999*********************************************9999999***********99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 461.84
//
Query:       MMETSP1325-20131115|5980_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        82  (0.00599766); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 262.24
//
Query:       MMETSP1325-20131115|5977_1  [L=661]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-11   43.6   0.6     0.0023   17.9   0.0    4.4  3  PF00041.16 Fibronectin type III domain
     0.0043   16.5   0.0      0.012   15.1   0.0    1.8  1  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
       0.15   10.6   0.0       0.21   10.1   0.0    1.2  1  PF14199.1  Domain of unknown function (DUF4317)


Domain annotation for each model (and alignments):
>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   5.1e-07    0.0023      26      85 .]      94     153 ..      90     153 .. 0.76
   2 !    6.8   0.0    0.0015       6.7      55      78 ..     357     380 ..     322     387 .. 0.79
   3 !   13.6   0.0   1.1e-05     0.049      46      85 .]     456     495 ..     397     495 .. 0.66

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 5.1e-07
                 HSSTBSEEEEEEEEE-TTCCEEEEEECCTTSEEEEES--TT-EEEEEEEEEC---.---BE CS
  PF00041.16  26 gggpitgYeveyrekgggeewkeftvprtttsvtltgLkpgteYefrVqavngag.egpeS 85 
                 +g+p ++Y v+ + ++++++wke+ +++   + t++gL  g +Y+frV a+n++  e+ +S
  MMETSP1325-20131115|5977_1  94 DGSPQVRYIVQQCLSETTRKWKEVLTTKFG-QSTVNGLASGVPYRFRVIALNRNNlESAPS 153
                 578888999976666666556665555554.89*******************998777665 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0015
                 TSEEEEES--TT-EEEEEEEEEC- CS
  PF00041.16  55 ttsvtltgLkpgteYefrVqavng 78 
                 ++  t++gL p+t Y f+++  + 
  MMETSP1325-20131115|5977_1 357 KPYGTVRGLAPNTLYYFTLRLSTS 380
                 55679*************986655 PP

  == domain 3    score: 13.6 bits;  conditional E-value: 1.1e-05
                 EEEEEECCTTSEEEEES--TT-EEEEEEEEEC---.---BE CS
  PF00041.16  46 wkeftvprtttsvtltgLkpgteYefrVqavngag.egpeS 85 
                 w+++  +++++++++ +L +++ Y frV  +n++g  g++S
  MMETSP1325-20131115|5977_1 456 WVTYF-EGHENTAKVVKLLANSAYYFRVSCLNTKGvAGMPS 495
                 33333.345669***********************999887 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.6e-06     0.012      27      53 ..      53      79 ..      36      80 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.6e-06
   PF13833.1 27 vdilfrefDtdgdGkisfeEFcvller 53
                 + l++++D  +d+ i++++F+++l+r
  MMETSP1325-20131115|5977_1 53 STSLLDAIDSSDDNNITWADFHAFLQR 79
                5789*********************98 PP

>> PF14199.1  Domain of unknown function (DUF4317)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   4.7e-05      0.21     233     323 ..     201     289 ..     191     397 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 4.7e-05
   PF14199.1 233 keqketFqeivkevlgedeekevvkeiqeelnelieeekeeeeepltLdkkevkkvLkesGveeektekveksyeeefgedtellaenlid 323
                 ++ k+++++i++e  ++  + e   +++ + ++    +k ++++  +++++++ ++L++ Gv++ + ekv++++    +e++ l+ e  ++
  MMETSP1325-20131115|5977_1 201 EQRKHAIDNILSEWTDAGPDDEGAVSVKKTFRRQTTFRK-TDNDMEIISSSDMANILRDLGVPD-TREKVQETFLALKAEEERLVDEATAR 289
                 566899999999999999999999999999999999999.55666699****************.889*****998887777776665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.07u 0.37s 00:00:01.44 Elapsed: 00:00:00.53
# Mc/sec: 2988.66
//
Query:       MMETSP1325-20131115|5983_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 674.53
//
Query:       MMETSP1325-20131115|5981_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   11.5   0.2       0.38    9.3   0.1    1.9  1  PF03405.9 Fatty acid desaturase
      0.094   12.3   0.0       0.15   11.7   0.0    1.4  1  PF06891.6 P2 phage tail completion protein R (GpR)


Domain annotation for each model (and alignments):
>> PF03405.9  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   5.5e-05      0.38     134     206 ..       8      79 ..       4     156 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 5.5e-05
   PF03405.9 134 ektiqyligsGmdpgtennpylgfiytsfqeratfvshgntarlakekgdtklaqicgkiasDekrhetaytk 206
                 +++ q+++  G ++   +++y  f y  +   +t v+ +  + +++ +g  ++aq+ ++i++  k  + a + 
  MMETSP1325-20131115|5981_1   8 DHITQEVVHGGRNSTCPEQGYEEFCYHNYLMNSTTVAARRRS-ASQLTGGATIAQVQTRICAYYKYSARAMRS 79 
                 67899*****************************99877654.445679999******999988777666555 PP

>> PF06891.6  P2 phage tail completion protein R (GpR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.2e-05      0.15      80     118 ..      99     137 ..      48     149 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.2e-05
   PF06891.6  80 nqpdlreekrlkdpefdvdindddsadleieieLtErvv 118
                 + p l++++ +k+p fd++ n    ad++i ++L+E+v+
  MMETSP1325-20131115|5981_1  99 HSPPLNRALTSKAPLFDAAKNKIGVADVAIGLDLVEDVS 137
                 677789999***************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1163.94
//
Query:       MMETSP1325-20131115|5986_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 474.75
//
Query:       MMETSP1325-20131115|5989_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-12   47.0   0.1    2.5e-12   46.9   0.0    1.0  1  PF00106.20 short chain dehydrogenase
     0.0081   15.7   0.0     0.0081   15.7   0.0    1.1  1  PF08659.5  KR domain
  ------ inclusion threshold ------
      0.013   15.2   0.0      0.014   15.1   0.0    1.0  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase
      0.075   13.0   0.1      0.092   12.7   0.0    1.1  1  PF12788.2  YmaF family


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   7.3e-16   2.5e-12      78     153 ..       4      83 ..       1      84 [] 0.95

  Alignments for each domain:
  == domain 1    score: 46.9 bits;  conditional E-value: 7.3e-16
                 ----SEEEEE---TT-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH....HH---EEEEEECHHHHSSTT.HHHHHHHC CS
  PF00106.20  78 lgpldgvvhnagvlddgpleeltperlervlapkvtgawllheltld....adlgafvlfSSvagvlgspgqaaYaaaka 153
                 +gp +++++nag+++ + l e +++  + ++++++t+ + + + +l+    +++g +v+++S ag++g pg a Y+a+ka
  MMETSP1325-20131115|5989_1   4 AGPCTMLFNNAGIVTGKKLLEGKDHMQDLTMQVNATSHFWTVKSVLPammdKNHGHIVTIASSAGMVGTPGLADYCASKA 83 
                 699*******************9************************997666**************************8 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.4e-06    0.0081     116     154 ..      42      83 ..       2      84 .] 0.66

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.4e-06
                 HHHHHHHHCC...----EEEEEEEGGGT-------------H CS
   PF08659.5 116 awnLhellad...epldffvlfSSiagvlgsagqanyaaana 154
                  w ++ +l+    ++  ++v+++S ag++g++g a+y+a++a
  MMETSP1325-20131115|5989_1  42 FWTVKSVLPAmmdKNHGHIVTIASSAGMVGTPGLADYCASKA 83 
                 455555554444499999*********************876 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0     4e-06     0.014      89     154 ..      18      83 ..       4      84 .] 0.90

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 4e-06
                 TTS-GGG------HHHHHHHTHHHHHHHHHHGG..GB-----EEEEEE------------------ CS
   PF13561.1  89 vekplletsrkgllaalsisayslvsllkaalpknlmneggSivalsylaservipgyggmsvaKA 154
                  +k+lle + +  + +++++a+s   ++k +lp+++ ++ g iv++  +a    +pg  ++ ++KA
  MMETSP1325-20131115|5989_1  18 TGKKLLEGKDHMQDLTMQVNATSHFWTVKSVLPAMMDKNHGHIVTIASSAGMVGTPGLADYCASKA 83 
                 57999****************************8888888************99*****9999998 PP

>> PF12788.2  YmaF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.7e-05     0.092      28      79 ..      15      65 ..       3      73 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.7e-05
   PF12788.2 28 agvtgeaikigkshvhkieektdffdhfheicittgpaiklgngkhihlvkg 79
                 +vtg+ +  gk+h+  ++ +++   hf ++  +  pa+   n  hi  + +
  MMETSP1325-20131115|5989_1 15 GIVTGKKLLEGKDHMQDLTMQVNATSHFWTVKSV-LPAMMDKNHGHIVTIAS 65
                579**************************99765.58876666556555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 379.80
//
Query:       MMETSP1325-20131115|5990_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   14.1   0.0      0.055   13.2   0.0    1.5  1  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     4e-06     0.055       5      19 ..      56      70 ..      54      72 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4e-06
                HHHHHHH----HHHH CS
  PF00627.26  5 aiqqLreMGfsreea 19
                ++++L+eMG+s+++ 
  MMETSP1325-20131115|5990_1 56 LLKRLVEMGWSEDDL 70
                589*********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.32s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 606.74
//
Query:       MMETSP1325-20131115|5988_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-08   32.5   0.2    2.5e-07   30.6   0.0    2.1  2  PF13499.1  EF-hand domain pair
    1.6e-06   27.4   2.8     0.0018   17.9   0.1    2.9  2  PF13405.1  EF-hand domain
      2e-06   26.5   8.0    0.00027   19.9   0.7    4.2  5  PF00036.27 EF hand
    9.5e-06   24.6   1.3      0.058   12.6   1.0    3.2  2  PF13202.1  EF hand
     0.0099   15.3   3.8        1.8    8.1   0.0    3.7  4  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
        0.1   12.3   0.0         13    5.5   0.0    2.3  2  PF08100.6  Dimerisation domain
       0.12   11.8   0.1       0.35   10.3   0.1    1.8  1  PF12108.3  Splicing factor SF3a60 binding domain


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.4   4.7e+03      57      64 ..       3      10 ..       3      12 .. 0.80
   2 !   30.6   0.0   1.3e-10   2.5e-07       2      66 .]      24      93 ..      19      93 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 2.4
   PF13499.1 57 lsfeEflq 64
                + +eEfl+
  MMETSP1325-20131115|5988_1  3 IGYEEFLA 10
                78999987 PP

  == domain 2    score: 30.6 bits;  conditional E-value: 1.3e-10
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels...deevrevldyifkelDkn..gdGvlsfeEflqai 66
                +++aF+ +Dkdg+g ++++++l +++++ ++      +   ev +++++++D    +dG+++ +E  +++
  MMETSP1325-20131115|5988_1 24 AMQAFDIMDKDGSGIIEPDDILDAFDASKHPEViagKKTPNEVFREFLDTFDVGgvHDGKVTKDEWKNYY 93
                5689*************************9999**988888899999******************99886 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   9.1e-07    0.0018       3      27 ..      25      49 ..      23      53 .. 0.91
   2 !    8.8   0.2   0.00072       1.4       2      26 ..      67      93 ..      65     105 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 9.1e-07
                H---GCC-------B---HHHHHHH CS
   PF13405.1  3 reaFklfDkdgdGkidaeELrdaLr 27
                ++aF+++Dkdg+G i+ ++++da+ 
  MMETSP1325-20131115|5988_1 25 MQAFDIMDKDGSGIIEPDDILDAFD 49
                579******************9986 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00072
                HH---GCC---..----B---HHHHHH CS
   PF13405.1  2 lreaFklfDkd..gdGkidaeELrdaL 26
                +re+ + fD    +dGk++++E ++ +
  MMETSP1325-20131115|5988_1 67 FREFLDTFDVGgvHDGKVTKDEWKNYY 93
                789999999999**********99865 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.22   4.3e+02      17      26 ..       3      12 ..       2      14 .. 0.83
   2 !   19.9   0.7   1.4e-07   0.00027       3      26 ..      25      48 ..      23      50 .. 0.91
   3 ?   -1.8   0.0       1.2   2.3e+03       2      10 ..      67      75 ..      65      78 .. 0.64
   4 !    6.9   0.0     0.002       3.9      13      25 ..      80      92 ..      80      96 .. 0.87
   5 ?   -2.1   0.1       1.5   2.9e+03      17      26 ..     100     109 ..      97     111 .. 0.78

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.22
                BEHHHHHHHH CS
  PF00036.27 17 IsfeEfkeal 26
                I +eEf++ +
  MMETSP1325-20131115|5988_1  3 IGYEEFLAGV 12
                88****9876 PP

  == domain 2    score: 19.9 bits;  conditional E-value: 1.4e-07
                HHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkeal 26
                ++aF+++DkDg+G I+ ++ ++a+
  MMETSP1325-20131115|5988_1 25 MQAFDIMDKDGSGIIEPDDILDAF 48
                78*****************99986 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 1.2
                HHHHHHHHC CS
  PF00036.27  2 lkeaFkefD 10
                ++e+ + fD
  MMETSP1325-20131115|5988_1 67 FREFLDTFD 75
                466666666 PP

  == domain 4    score: 6.9 bits;  conditional E-value: 0.002
                TSSEBEHHHHHHH CS
  PF00036.27 13 gdGkIsfeEfkea 25
                +dGk++++E+k++
  MMETSP1325-20131115|5988_1 80 HDGKVTKDEWKNY 92
                6*********986 PP

  == domain 5    score: -2.1 bits;  conditional E-value: 1.5
                 BEHHHHHHHH CS
  PF00036.27  17 IsfeEfkeal 26 
                 I+ +++ e++
  MMETSP1325-20131115|5988_1 100 IDEDDYFELM 109
                 8899988887 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   1.0     3e-05     0.058       2      20 ..      26      43 ..      25      48 .. 0.87
   2 !    8.2   0.0   0.00071       1.4      13      23 ..      81      91 ..      80      93 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 3e-05
                HHHHHHH--S----B-HHH CS
   PF13202.1  2 kdtFrafDlNgDGkIsreE 20
                ++ F+ +D++g+G I +++
  MMETSP1325-20131115|5988_1 26 QA-FDIMDKDGSGIIEPDD 43
                66.************9875 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00071
                ---B-HHHHHH CS
   PF13202.1 13 DGkIsreELkr 23
                DGk++++E+k+
  MMETSP1325-20131115|5988_1 81 DGKVTKDEWKN 91
                *********85 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.62   1.2e+03      42      51 ..       3      12 ..       3      14 .. 0.82
   2 !    5.5   0.3    0.0057        11      31      48 ..      28      45 ..      26      51 .. 0.81
   3 !    8.1   0.0   0.00093       1.8      22      50 ..      62      92 ..      55      95 .. 0.76
   4 ?   -1.8   0.0       1.2   2.3e+03      42      53 ..     100     111 ..      99     112 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.62
   PF13833.1 42 isfeEFcvll 51
                i++eEF++ +
  MMETSP1325-20131115|5988_1  3 IGYEEFLAGV 12
                89****9865 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0057
   PF13833.1 31 frefDtdgdGkisfeEFc 48
                f+ +D dg+G+i  ++ +
  MMETSP1325-20131115|5988_1 28 FDIMDKDGSGIIEPDDIL 45
                99*********9766665 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.00093
   PF13833.1 22 lseeevdilfrefDt..dgdGkisfeEFcvl 50
                + +e +++ ++ fD    +dGk++++E++++
  MMETSP1325-20131115|5988_1 62 TPNEVFREFLDTFDVggVHDGKVTKDEWKNY 92
                4555577888888875579*********997 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 1.2
   PF13833.1  42 isfeEFcvller 53 
                 i+++++ +l+ r
  MMETSP1325-20131115|5988_1 100 IDEDDYFELMIR 111
                 899999999987 PP

>> PF08100.6  Dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.014        28       4      38 ..      20      55 ..      20      58 .. 0.86
   2 ?    5.5   0.0    0.0066        13      15      46 ..     132     163 ..     130     163 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.014
   PF08100.6  4 KaAiELglldiiakaggkplspselaskLpt.knpe 38
                ++A+ +  +di+ k g+  + p ++  +    k+pe
  MMETSP1325-20131115|5988_1 20 RTAMAMQAFDIMDKDGSGIIEPDDILDAFDAsKHPE 55
                68999999********99999999999888658887 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0066
   PF08100.6  15 iakaggkplspselaskLptknpeapvlldRl 46 
                 ++ + +   s++e+ + L  k  +++ +++Rl
  MMETSP1325-20131115|5988_1 132 LVTHSDGSQSVEEIHNDLGLKADDKAGMIKRL 163
                 6677777889*********************8 PP

>> PF12108.3  Splicing factor SF3a60 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   0.00018      0.35       5      16 ..      85      96 ..      82      97 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00018
   PF12108.3  5 ggDefeEFYeRL 16
                ++De++++Y+++
  MMETSP1325-20131115|5988_1 85 TKDEWKNYYDNV 96
                79*******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 967.76
//
Query:       MMETSP1325-20131115|5985_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-65  218.7   0.1    1.4e-64  217.2   0.1    1.7  2  PF01571.16 Aminomethyltransferase folate-binding domain
    3.4e-22   78.1   0.1    5.8e-22   77.4   0.1    1.4  1  PF08669.6  Glycine cleavage T-protein C-terminal barrel domain
     0.0015   18.2   0.0     0.0048   16.6   0.0    1.7  2  PF04268.7  Sarcosine oxidase, gamma subunit family


Domain annotation for each model (and alignments):
>> PF01571.16  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.2   0.1   3.1e-68   1.4e-64       1     211 []      84     296 ..      84     296 .. 0.96
   2 ?   -1.4   0.0      0.25   1.1e+03     104     161 ..     299     357 ..     297     361 .. 0.58

  Alignments for each domain:
  == domain 1    score: 217.2 bits;  conditional E-value: 3.1e-68
                 -EE-TT---EEEE-E-HHHHHHHHCSS-TTSS-S-E-EEEEEE-----EEEEEEEEE-----EEEEE-TTTHHHHHHHHHCTTS-..--EEEEE-TTTEEEEE-----HHHHHHHH-..---GGGS-TT-EEEE..---.EEEEE----------EEEE--HHHHHHHHHHHH---------B----HHHHHHH--------SS-.SS-TTTTT-GGG CS
  PF01571.16   1 lfdvshmgkievsGpdalkfLqrlltndvsklkpgsatytlllnekGgilddlivyrlgedefllvvnaaaaekllawlekylvk..skveledltdelallalqGpkarellqelv..dldleelpffqarev..lgg.kvlvsrtgytgedGfeiyvpaekalalwealleagkeagvkpaglgardtlRleaglplygndldeettPleaglewa 211
                 lfdvshmg+i+ +G d+++fL+++l  d+++l +g+++++l+++++G i+dd+++ + g+  +++vvn+a++ k++aw+e+++++   +v++e ++d lal+alqGp a++ +++lv  ++dl+++ f++  ++  +g   ++++r+gytgedGfe++vp++ka+ l++all++ +   v p glgard+lRleagl+lygnd+d++++P+ea+l w+
  MMETSP1325-20131115|5985_1  84 LFDVSHMGQIRWRGADRVAFLEKVLVGDIAGLGDGEGRLSLITTNEGTIIDDTVLCNAGDS-VYMVVNGACKHKDMAWFEEQMADfgGDVSMEYCDD-LALVALQGPGAAATVAKLVpsSVDLSKMDFMTGFDTtlAGIeGCRLTRCGYTGEDGFELSVPNDKAELLAQALLDDAS---VLPTGLGARDSLRLEAGLCLYGNDIDDTINPVEANLTWT 296
                 8************************************************************.******************9999989*********9.*******************5555*********99999855568******************************99986...*************************************96 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.25
                 ---HHHHHHHH---.-GGGS-TT-EEEE---EEEEE----------EEEE--HHHHHHH CS
  PF01571.16 104 Gpkarellqelvdl.dleelpffqarevlggkvlvsrtgytgedGfeiyvpaekalalw 161
                 Gpk+r+  ++ +++ d    p+ + +++ +++v ++       +G e+y+  e+  +++
  MMETSP1325-20131115|5985_1 299 GPKSRRRTEQGFNGaDKFLTPEGKLKKTTKKRVGLTGFKAPARQGAELYLGEEQIGHVT 357
                 77777777777732122222222222222224555556666679999999999998886 PP

>> PF08669.6  Glycine cleavage T-protein C-terminal barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   0.1   1.3e-25   5.8e-22       3      95 .]     310     401 ..     308     401 .. 0.87

  Alignments for each domain:
  == domain 1    score: 77.4 bits;  conditional E-value: 1.3e-25
                 ----HHHHCCHHC.-TT.EEEEEEECSTT---------EE.---B---EEEEEE-S----EEEEEEE.ETT-----EEEEE----EEEEEEE-S CS
   PF08669.6   3 fiGkeallrqkaegvar.rrlvgleleltaplregepvyaddgekvGevtsgtySptlgknialayvrteharigteveveirgkriratvvkl 95 
                 f G++  l  + +  +  +++vgl+  + ap+r+g+++y  ++e++G+vtsgt+Sp l+k+ia++yv +e a++gte++v+ir+k+ +a+v+k+
  MMETSP1325-20131115|5985_1 310 FNGADKFLTPEGKLKKTtKKRVGLTGFK-APARQGAELYL-GEEQIGHVTSGTFSPCLKKPIAMGYVAKELAKEGTEIQVKIRNKMQTAVVTKM 401
                 666666655555433333******6667.9**********.**************************************************986 PP

>> PF04268.7  Sarcosine oxidase, gamma subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.55   2.5e+03      49      94 ..      66     111 ..      60     114 .. 0.69
   2 !   16.6   0.0   1.1e-06    0.0048      32     144 ..     135     255 ..     120     257 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.55
   PF04268.7  49 gkelaaalaealae.lasvvdlShgrvlieisGakaeavLakstaiD 94 
                 +  ++++  +   e + s+ d+Sh    i+  Ga   a L+k    D
  MMETSP1325-20131115|5985_1  66 AGGVMNEHLHCRSEgKSSLFDVSHMG-QIRWRGADRVAFLEKVLVGD 111
                 55556655555555588999999964.67888888888888776665 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 1.1e-06
   PF04268.7  32 esvlwlgPde.flvidpegkel.aaalaealae.la.svvdlShgrvlieisGakaeavLaksta..iDlhadaFpvgaaattilakie.vvllr...tgedsfevlvfrsFaeslwkaLlda 144
                 ++vl  + d  ++v+++  k++ +a + e +a+  +   ++      l+ ++G+ a a++ak+++  +Dl+   F  g    t+la ie + l+r   tged fe+ v    ae l +aLld 
  MMETSP1325-20131115|5985_1 135 DTVLCNAGDSvYMVVNGACKHKdMAWFEEQMADfGGdVSMEYCDDLALVALQGPGAAATVAKLVPssVDLSKMDFMTG--FDTTLAGIEgCRLTRcgyTGEDGFELSVPNDKAELLAQALLDD 255
                 466666666527777755555559999999999655345678888999**************9752267777777766..45555555439999644499********999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.38s 00:00:01.10 Elapsed: 00:00:00.51
# Mc/sec: 1935.88
//
Query:       MMETSP1325-20131115|5993_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 321.21
//
Query:       MMETSP1325-20131115|5992_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 689.56
//
Query:       MMETSP1325-20131115|5994_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.069   12.5   3.5      0.076   12.4   2.4    1.0  1  PF06658.7 Protein of unknown function (DUF1168)


Domain annotation for each model (and alignments):
>> PF06658.7  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   2.4   5.5e-06     0.076      85     126 ..       1      41 [.       1      46 [. 0.61

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.5e-06
   PF06658.7  85 KkrekRekkkqkkkkkkkkkkeekkeekesekkseesseeee 126
                 +krekR   k+kk  +k k  +  + e+ +  ++++ +ee++
  MMETSP1325-20131115|5994_1   1 RKREKRLAAKAKKDAEKAKAAGA-GGEDAAATTADDAAEEQS 41 
                 68999999999888888887777.334444444444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       688  (0.0503218); expected 273.4 (0.02)
Passed bias filter:                      507  (0.0370831); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 205.40
//
Query:       MMETSP1325-20131115|5995_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-09   37.5   7.5    1.4e-09   37.4   5.2    1.1  1  PF07885.11 Ion channel
     0.0059   15.7   3.3     0.0079   15.3   2.3    1.2  1  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF07885.11  Ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   5.2     2e-13   1.4e-09      31      74 ..       2      45 ..       1      50 [. 0.91

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 2e-13
  PF07885.11 31 fsfvtltTiGYGdivPgtdagrlfaivyillGlalfalllavlg 74
                ++++t  T+GYGd+v++td+g++f+++++l+G +++a ++a  +
  MMETSP1325-20131115|5995_1  2 WATITAVTVGYGDVVATTDGGMIFSCFFMLFGATIMANVIALPT 45
                799**********************************9998755 PP

>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   2.3   1.2e-06    0.0079     151     195 ..       2      41 ..       1      43 [. 0.89

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.2e-06
                 XXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXX.XXXXXX CS
  PF00520.26 151 tlfrlmtgegwgdlmyatlragskigyiyfvifiilgsflllnll 195
                 +++ ++ ++g+gd++++     ++ g+i+ + f+++g+ ++ n++
  MMETSP1325-20131115|5995_1   2 WATITAVTVGYGDVVAT-----TDGGMIFSCFFMLFGATIMANVI 41 
                 78899***********9.....********999999998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       508  (0.0371562); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 334.59
//
Query:       MMETSP1325-20131115|5997_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-28   95.9   0.1    9.9e-28   95.7   0.0    1.0  1  PF00085.15 Thioredoxin
    1.2e-08   35.0   0.3    2.8e-07   30.5   0.2    2.1  1  PF13098.1  Thioredoxin-like domain
    2.4e-06   27.3   0.1    5.3e-06   26.2   0.1    1.6  1  PF13899.1  Thioredoxin-like
    0.00012   22.0   0.1    0.00093   19.2   0.0    1.9  2  PF13905.1  Thioredoxin-like
     0.0012   18.2   0.1     0.0014   18.0   0.1    1.1  1  PF08534.5  Redoxin
     0.0077   15.7   0.0     0.0087   15.6   0.0    1.2  1  PF00578.16 AhpC/TSA family
  ------ inclusion threshold ------
      0.028   14.0   0.0       0.21   11.2   0.0    1.8  2  PF13848.1  Thioredoxin-like domain
      0.037   13.8   0.0       0.05   13.4   0.0    1.4  1  PF00462.19 Glutaredoxin
      0.043   13.7   0.2       0.11   12.4   0.1    1.6  2  PF13462.1  Thioredoxin
      0.097   12.0   0.0       0.11   11.7   0.0    1.2  1  PF13728.1  F plasmid transfer operon protein


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.7   0.0   7.2e-31   9.9e-28       2      98 ..      11     107 ..      10     108 .] 0.95

  Alignments for each domain:
  == domain 1    score: 95.7 bits;  conditional E-value: 7.2e-31
                 EEESSHHHHHHHHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-..TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEEEE---.-HHHHH CS
  PF00085.15   2 vlvltkenfeeevaksdklvlvefyApwCGhCkalaPeyeklaeelke..kvvlakvdvdenkdlaseygvegiPtlklfkngkkveevegarekeklv 98 
                 v+++t++n ++++ak dk+v++efyApwCGhC++l+P+y+kla ++++  +v++a +d+++n ++++ ++v+g+Pt+++ +++++  +++gar+++++v
  MMETSP1325-20131115|5997_1  11 VVKVTDDNVDTVLAK-DKDVMIEFYAPWCGHCQQLKPVYKKLAAKFESvdSVTVAAMDATDN-TVPDGFDVQGYPTIYFSPANGEPISYDGARDEASMV 107
                 678999********9.*******************************999**********99.7****************************9998775 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.2   2.1e-10   2.8e-07       3     108 ..      24     106 ..      22     108 .] 0.80

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 2.1e-10
   PF13098.1   3 gngkrvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpGylpaeel 108
                 ++ k v++ f +p+C+ C++l++  kk   ++ +++  +  + v++ ++                  + +     ++v+g Pti+f +++G+++  + G+ +++ +
  MMETSP1325-20131115|5997_1  24 AKDKDVMIEFYAPWCGHCQQLKPVYKK---LAAKFE-SVDSVTVAAMDA------------------TDNTVPDGFDVQGYPTIYFSPANGEPIS-YDGARDEASM 106
                 67899******************9996...666664.555655555533..................33468899*****************995.9999888765 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.1   3.9e-09   5.3e-06       7      79 ..      16      87 ..      12      90 .. 0.68

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 3.9e-09
   PF13899.1  7 dealakareegkpllvifgadwcpdCqaldrdvlsdeevkaalaekfvllrvdvterdanleldr...qgvPvvvf 79
                d  +    +++k +++ f+a wc++Cq l+ +    + ++a + e +  + v   +  +n+ +d+   qg+P++ f
  MMETSP1325-20131115|5997_1 16 DDNVDTVLAKDKDVMIEFYAPWCGHCQQLKPVY---KKLAAKF-ESVDSVTVAAMDATDNTVPDGfdvQGYPTIYF 87
                5667788899*******************9875...2222212.33333344444555566666666699999887 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   6.8e-07   0.00093       4      42 ..      29      63 ..      25      75 .. 0.80
   2 ?    2.2   0.0      0.13   1.8e+02      65      88 ..      63      86 ..      57      93 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 6.8e-07
   PF13905.1  4 vllyfaaswcppckaftpelkelyeklkaskdkveivyV 42
                v++ f+a+wc++c++  p+ k+l  k++     v+ v V
  MMETSP1325-20131115|5997_1 29 VMIEFYAPWCGHCQQLKPVYKKLAAKFE----SVDSVTV 63
                7899***********************8....3444443 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.13
   PF13905.1 65 vpfndkrrnklkklykvkaiPtlv 88
                v+  d + n++   ++v+++Pt++
  MMETSP1325-20131115|5997_1 63 VAAMDATDNTVPDGFDVQGYPTIY 86
                5556777999999*********87 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1     1e-06    0.0014      22      77 ..      20      74 ..       7      93 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 1e-06
                EHHHHTTSEEEEE---------IIIIIHHHHTHHHH.HH----EEEEE-SS-HHHH CS
   PF08534.5 22 slsdfkgkkvvlvfvpgafcptCsaehpyleklaklakekgvdvvavvaqndafvk 77
                ++   k+k v++ f++  +c+ C++  p  +kla+++++ +   va + ++d++v 
  MMETSP1325-20131115|5997_1 20 DTVLAKDKDVMIEFYAP-WCGHCQQLKPVYKKLAAKFESVDSVTVAAMDATDNTVP 74
                4444689**********.*******9999999987777777777777666666554 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   6.4e-06    0.0087      23      65 ..      24      66 ..       9      93 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 6.4e-06
  PF00578.16 23 lkgkpvvLffypkdfcpvCttelpalaelyeefkkk.gvevigv 65
                 k+k v++ fy+  +c +C++  p +++l+ +f++   v+v ++
  MMETSP1325-20131115|5997_1 24 AKDKDVMIEFYAP-WCGHCQQLKPVYKKLAAKFESVdSVTVAAM 66
                38899********.********************7723455444 PP

>> PF13848.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00015      0.21      73     138 ..       5      71 ..       4      74 .. 0.86
   2 ?    6.9   0.0    0.0031       4.2       8      60 ..      44     100 ..      40     107 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00015
                 HH--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXX CS
   PF13848.1  73 knslplvgeltpenaeelfesglppllllflnkdseeteklknriekvakkf..kgkinfatvdadsf 138
                 + s +lv ++t++n++++  +++  +++ f+     + ++lk  ++k+a kf   +++++a +da+++
  MMETSP1325-20131115|5997_1   5 DDSESLVVKVTDDNVDTVLAKDKD-VMIEFYAPWCGHCQQLKPVYKKLAAKFesVDSVTVAAMDATDN 71 
                 56789*****************77.8888988788889**************5557899999998866 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0031
                 HHHHHHHHHHH--.-..-B-----..-HHHHHHTT---.--EEEEETTTTEEEEE-HH CS
   PF13848.1   8 lkeiFekaakelkgd..vtfgvts..ekevakklgike.pkvllfrkfdekrvkydge 60 
                 lk  ++k a+++++   vt+++ +  ++ v + ++++  p++  f + + ++++ydg+
  MMETSP1325-20131115|5997_1  44 LKPVYKKLAAKFESVdsVTVAAMDatDNTVPDGFDVQGyPTI-YFSPANGEPISYDGA 100
                 667899999999844446666655323335555*****6666.5999999******97 PP

>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.7e-05      0.05       6      54 ..      35      86 ..      21      95 .. 0.69

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.7e-05
                -STSHHHHHHHHHHHHTTHHEEEEE...TTTCHHHHHHHHHHHSSBSSSEEE CS
  PF00462.19  6 kptCpyCkkakrlLdelgvkyeeid...vdedpeireelkelsgwrtvPqvf 54
                 p+C++C++ k + ++l  k+e +d   v ++++  + + +  +++  P+++
  MMETSP1325-20131115|5997_1 35 APWCGHCQQLKPVYKKLAAKFESVDsvtVAAMDATDNTVPDGFDVQGYPTIY 86
                39******************87776111444445544454444666666665 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.8e-05      0.11      14      42 ..      27      55 ..      24      74 .. 0.83
   2 ?   -1.0   0.0         1   1.4e+03     125     143 ..      68      87 ..      59     104 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.8e-05
   PF13462.1 14 pvtvieyadltCphCarfheeveklleky 42
                + ++ie+  + C hC +++  ++kl +k+
  MMETSP1325-20131115|5997_1 27 KDVMIEFYAPWCGHCQQLKPVYKKLAAKF 55
                5689*********************9998 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 1
   PF13462.1 125 adseea.kaagiestPtfii 143
                 a ++++ +  ++++ Pt++ 
  MMETSP1325-20131115|5997_1  68 ATDNTVpDGFDVQGYPTIYF 87 
                 44555557788999999985 PP

>> PF13728.1  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.4e-05      0.11     123     189 ..      29      87 ..      13      99 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 8.4e-05
   PF13728.1 123 GlfffyrsdcpycealapilqafaekygievlpVsvDGkglpelpnsrkdtgqaqklgvkttPalvl 189
                  ++ fy   c  c++l+p+++++a k +      svD +++ ++  +  d+     + v+ +P++++
  MMETSP1325-20131115|5997_1  29 VMIEFYAPWCGHCQQLKPVYKKLAAKFE------SVDSVTVAAMDAT--DNTVPDGFDVQGYPTIYF 87 
                 5788********************9986......3333333333333..444445566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|5996_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.55
# Mc/sec: 226.56
//
Query:       MMETSP1325-20131115|6002_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 315.08
//
Query:       MMETSP1325-20131115|6003_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-15   57.3   0.1    1.4e-15   56.8   0.0    1.2  1  PF00202.16 Aminotransferase class-III


Domain annotation for each model (and alignments):
>> PF00202.16  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.0     1e-19   1.4e-15     272     338 ..       3      71 ..       1      72 [. 0.96

  Alignments for each domain:
  == domain 1    score: 56.8 bits;  conditional E-value: 1e-19
                 ..-SSTT-HHHHHHHHHHHHHHHHTTHHHHHHH---TTTHHHHHHHCC-..TTEEEEE-----EEEEEE CS
  PF00202.16 272 hgttfggnplacavalavlevieeeellenaqekgerlkkgLeeLkeky..dvikevRgkGlliaielv 338
                 +g+t+ gn +aca+a+a+levi+ e ll+n+++ ge++ +gL+++++k+    i++vRg+Gl+i+ e++
  MMETSP1325-20131115|6003_1   3 KGGTYAGNAVACAAANATLEVIRGEGLLANTKARGEQFMTGLRAIQAKHprGLISDVRGRGLMIGLEFN 71 
                 699**********************************************8779*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 584.37
//
Query:       MMETSP1325-20131115|5998_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-11   40.7   0.5    5.5e-06   25.1   0.1    2.5  2  PF00036.27 EF hand
    7.7e-10   37.7   0.9    3.8e-05   23.1   0.1    2.5  2  PF13405.1  EF-hand domain
      9e-10   37.3   2.5    3.8e-05   22.7   0.1    2.7  2  PF13202.1  EF hand
    1.5e-09   37.1   1.6      4e-05   23.0   0.1    2.4  2  PF13833.1  EF-hand domain pair
    6.1e-08   32.5   0.4    1.2e-07   31.6   0.2    1.5  1  PF13499.1  EF-hand domain pair
    0.00024   21.0   0.0    0.00054   19.9   0.0    1.6  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)
     0.0009   18.9   0.3     0.0037   17.0   0.2    1.9  2  PF13180.1  PDZ domain


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.3e-05     0.025       6      28 ..      47      69 ..      42      70 .. 0.87
   2 !   25.1   0.1   2.8e-09   5.5e-06       2      27 ..      81     106 ..      80     108 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.3e-05
                HHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  6 FkefDkDgdGkIsfeEfkealkk 28
                F e DkDg+G ++  E+k++l++
  MMETSP1325-20131115|5998_1 47 FVEGDKDGSGALDAFELKTLLET 69
                7899***************9975 PP

  == domain 2    score: 25.1 bits;  conditional E-value: 2.8e-09
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 l e+Fk++D +gdG + ++Efk++ k
  MMETSP1325-20131115|5998_1  81 LVELFKKYDANGDGVLGLDEFKNLAK 106
                 6699******************9977 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   3.4e-05     0.066       3      27 ..      44      68 ..      42      77 .. 0.83
   2 !   23.1   0.1   1.9e-08   3.8e-05       2      27 ..      81     106 ..      80     112 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.4e-05
                H---GCC-------B---HHHHHHH CS
   PF13405.1  3 reaFklfDkdgdGkidaeELrdaLr 27
                ++ F   Dkdg+G +da EL+ +L 
  MMETSP1325-20131115|5998_1 44 EAKFVEGDKDGSGALDAFELKTLLE 68
                5666677**************9997 PP

  == domain 2    score: 23.1 bits;  conditional E-value: 1.9e-08
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 l e+Fk++D +gdG + ++E++++ +
  MMETSP1325-20131115|5998_1  81 LVELFKKYDANGDGVLGLDEFKNLAK 106
                 679******************99766 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   9.7e-06     0.019       5      25 .]      47      67 ..      43      67 .. 0.85
   2 !   22.7   0.1   1.9e-08   3.8e-05       1      24 [.      81     104 ..      81     105 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 9.7e-06
                HHHH--S----B-HHHHHHHH CS
   PF13202.1  5 FrafDlNgDGkIsreELkrlv 25
                F + D++g+G +++ ELk+l+
  MMETSP1325-20131115|5998_1 47 FVEGDKDGSGALDAFELKTLL 67
                7788**************985 PP

  == domain 2    score: 22.7 bits;  conditional E-value: 1.9e-08
                 HHHHHHHH--S----B-HHHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkrl 24 
                 l+++F+++D+NgDG +  +E+k+l
  MMETSP1325-20131115|5998_1  81 LVELFKKYDANGDGVLGLDEFKNL 104
                 5689******************98 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   7.4e-06     0.014      21      52 ..      35      68 ..      26      70 .. 0.86
   2 !   23.0   0.1     2e-08     4e-05      11      52 ..      64     106 ..      62     108 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 7.4e-06
   PF13833.1 21 g..lseeevdilfrefDtdgdGkisfeEFcvlle 52
                   l++e++++ f e+D dg+G+++  E ++lle
  MMETSP1325-20131115|5998_1 35 LssLTDEQLEAKFVEGDKDGSGALDAFELKTLLE 68
                356*************************999986 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 2e-08
   PF13833.1  11 kralallglkg..lseeevdilfrefDtdgdGkisfeEFcvlle 52 
                 k  l +  +++  ++ +++ +lf++ D++gdG ++++EF++l +
  MMETSP1325-20131115|5998_1  64 KTLLET-VMPDrtFGTDQLVELFKKYDANGDGVLGLDEFKNLAK 106
                 554533.3455679999***********************9875 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.2     6e-11   1.2e-07       5      65 ..      46     104 ..      34     105 .. 0.86

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 6e-11
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgsels..deevrevldyifkelDkngdGvlsfeEflqa 65 
                  F + Dkdg+g ld  eL+ ll     +++   +++ e+    fk++D ngdGvl ++Ef ++
  MMETSP1325-20131115|5998_1  46 KFVEGDKDGSGALDAFELKTLLETVMPDRTfgTDQLVEL----FKKYDANGDGVLGLDEFKNL 104
                 57777*****************99876666887777777....*****************875 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   2.8e-07   0.00054       8      61 ..     127     177 ..     122     198 .. 0.72

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 2.8e-07
                 TTSH---EEEESSTTSSSSEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTSH CS
  PF00595.19   8 krgglGfslkggsdkrdkgifvsevvpggaaeagglkeGDkIlsvNgvdvenvs 61 
                  +++lGfs+k + ++ ++ ++vs+v   +    + ++++D I ++Ngv+++  s
  MMETSP1325-20131115|5998_1 127 ANEKLGFSVKNDLND-ANLVVVSKVKD-SELVGQ-INPDDEIYAINGVPIAHQS 177
                 6899******75554.46666666665.444444.9***********9998765 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.89   1.7e+03       4      40 ..       4      37 ..       2      48 .. 0.67
   2 !   17.0   0.2   1.9e-06    0.0037       3      50 ..     131     177 ..     129     193 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.89
   PF13180.1  4 GvsvsqlentrgvlvvsVkessPaakaglkpGDiilk 40
                G  +s l++  ++l+ +  es Pa    +k+G  + +
  MMETSP1325-20131115|5998_1  4 GTALSSLTD--ELLIGKAGESAPATPX-VKMGTALSS 37
                556666666..7888888888888777.777655555 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 1.9e-06
   PF13180.1   3 iGvsvsqlentrgvlvvsVkessPaakaglkpGDiilkvdgkkvkslt 50 
                 +G sv+++ n+  ++vvs  ++s   ++ + p+D+i++++g+++  ++
  MMETSP1325-20131115|5998_1 131 LGFSVKNDLNDANLVVVSKVKDSELVGQ-INPDDEIYAINGVPIAHQS 177
                 8999999999888888888888888888.***************4433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.63
# Mc/sec: 779.77
//
Query:       MMETSP1325-20131115|6005_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       689  (0.050395); expected 273.4 (0.02)
Passed bias filter:                      465  (0.0340111); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 585.78
//
Query:       MMETSP1325-20131115|6004_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 782.81
//
Query:       MMETSP1325-20131115|6008_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.60
# Mc/sec: 251.62
//
Query:       MMETSP1325-20131115|6013_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.053   13.0   0.4      0.056   12.9   0.3    1.1  1  PF00293.23 NUDIX domain
       0.23   11.2   2.2       0.25   11.0   1.5    1.0  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
       0.27   10.6   5.6       0.31   10.4   3.9    1.1  1  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF00293.23  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   1.2e-05     0.056      45      78 ..      29      62 ..      14      73 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.2e-05
                HHHHHHHHHHHHHS-EEEEEEEEEEEEEEETTCC CS
  PF00293.23 45 peeaAvRElkEEtGidlekvrlvgvanydaptdd 78
                ++ aA+RE++ E+G+d e  + ++  +y++ ++ 
  MMETSP1325-20131115|6013_1 29 IVLAARREAEVEVGVDGEADDDEYEDEYEDEYEE 62
                567**************77777777777666554 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.5   5.5e-05      0.25     252     288 ..      38      68 ..      21      72 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.5e-05
                 ...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---- CS
   PF03153.8 252 kieiQvDGagddssdeseedeeadedeeekdkvieeD 288
                 + e+ vDG++dd++ e+e ++e +ed+      ie++
  MMETSP1325-20131115|6013_1  38 EVEVGVDGEADDDEYEDEYEDEYEEDD------IEDE 68 
                 333889********9998899999999......6655 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.9   6.9e-05      0.31     112     142 ..      40      70 ..      22      76 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 6.9e-05
                 ......----XXXXXXXXXXXXXXXXXXXXX CS
  PF03066.10 112 desldeeddeedeeeeddeedddeeeeeeee 142
                 +  +d e d++++e+e ++e ++++ e+e  
  MMETSP1325-20131115|6013_1  40 EVGVDGEADDDEYEDEYEDEYEEDDIEDEVF 70 
                 3344557777777777777777777777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.82
# Mc/sec: 225.02
//
Query:       MMETSP1325-20131115|6014_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.6e-14   51.0   0.1    1.1e-13   50.9   0.1    1.1  1  PF13896.1 Glycosyl-transferase for dystroglycan
  ------ inclusion threshold ------
       0.12   10.7   0.0       0.15   10.4   0.0    1.1  1  PF12044.3 Putative peptidase family


Domain annotation for each model (and alignments):
>> PF13896.1  Glycosyl-transferase for dystroglycan
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.1   1.6e-17   1.1e-13     230     313 ..      19     104 ..       2     116 .. 0.78

  Alignments for each domain:
  == domain 1    score: 50.9 bits;  conditional E-value: 1.6e-17
   PF13896.1 230 kksWEpfyiltr.kdplyderfrwegkdkisqvyelcllgYeFhvldnaFlVHkGiktkkakasrkeaek.ktnrlikkkilkelk 313
                 ++++Ep++i+++ ++p++derf+++gk+ki + y+++  g++F v + +F +H +++++kak  +  +++ ++n+  +    ++++
  MMETSP1325-20131115|6014_1  19 TRRYEPYVIVRKcASPKFDERFTGYGKNKIQHLYHMRWEGFRFGVFPRGFIIHVPHEKSKAKLMWDIKDSpDHNSAQRMSHRERMD 104
                 569*******9769*********************************************998877744331333333333333344 PP

>> PF12044.3  Putative peptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   2.2e-05      0.15     195     233 ..      86     124 ..      78     136 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 2.2e-05
   PF12044.3 195 aelrdlnlaQqnkkakdegeLfdiaaealkkygkpesee 233
                 +++ d n aQ  ++ ++ ++L++ + e++k+++ +e++ 
  MMETSP1325-20131115|6014_1  86 KDSPDHNSAQRMSHRERMDNLYSTFCEEIKRSSPFEKSP 124
                 678899*************************99885544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 605.62
//
Query:       MMETSP1325-20131115|6010_1  [L=436]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.64
# Mc/sec: 1632.52
//
Query:       MMETSP1325-20131115|6018_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 306.20
//
Query:       MMETSP1325-20131115|6012_1  [L=407]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       449  (0.0328408); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 1806.14
//
Query:       MMETSP1325-20131115|6017_1  [L=431]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-53  179.8   0.0    2.4e-53  179.2   0.0    1.3  1  PF08954.6  Domain of unknown function (DUF1900)
    9.7e-23   79.0   1.6    6.7e-07   28.8   0.0    4.3  4  PF00400.27 WD domain, G-beta repeat
    1.4e-13   50.1   0.0    2.3e-13   49.4   0.0    1.4  1  PF08953.6  Domain of unknown function (DUF1899)


Domain annotation for each model (and alignments):
>> PF08954.6  Domain of unknown function (DUF1900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.2   0.0   5.2e-57   2.4e-53       2     136 .]     250     383 ..     249     383 .. 0.98

  Alignments for each domain:
  == domain 1    score: 179.2 bits;  conditional E-value: 5.2e-57
   PF08954.6   2 laseelDtssgvlipfyDedtsllylagkGdtniryyevedeepyllelsefkssepqkglaflpkraldvkkcEiaralkltkskiepvsfivpRkkselfqeDlYpdtaatepaltaeeWlsGknkqpkkvsl 136
                 l++e++D+++gv+ip+yDedts+lylagkGd+n+ryye+  e+p l +lse++s++p kg+af+pkr+++v+kcE ar lklt++ iep+sfivpRk s+ fqeD++p+t+a  pa+t++eWl+G +k p k+sl
  MMETSP1325-20131115|6017_1 250 LKTEKIDQAAGVIIPYYDEDTSVLYLAGKGDGNVRYYEILPENPLLFKLSEYSSTTPAKGMAFIPKRGCNVMKCETARGLKLTSNAIEPLSFIVPRK-SDAFQEDIFPPTFAGVPACTSDEWLDGIDKMPGKISL 383
                 7899*********************************************************************************************.9********************************9996 PP

>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   2.3e-09     1e-05       7      38 ..      68     100 ..      66     101 .. 0.95
   2 !   28.8   0.0   1.5e-10   6.7e-07       2      39 .]     113     151 ..     112     151 .. 0.96
   3 !   20.7   0.0   5.2e-08   0.00024      10      39 .]     165     194 ..     161     194 .. 0.94
   4 ?   -0.3   0.0      0.22     1e+03      33      39 .]     236     242 ..     216     242 .. 0.76

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 2.3e-09
                 EESSSSSEEEEEEESS.STEEEEEETTSEEEEE CS
  PF00400.27   7 lrgHtspVtcvafspd.gpllasgSrDgtirlW 38 
                 + gH+s+V + +f+p   +l+a++S+D+t +++
  MMETSP1325-20131115|6017_1  68 IAGHKSAVLDFDFNPFhEHLIATASDDCTAKVF 100
                 67*****************************97 PP

  == domain 2    score: 28.8 bits;  conditional E-value: 1.5e-10
                 EEEEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27   2 eckatlrgHtspVtcvafspd.gpllasgSrDgtirlWd 39 
                 e++  l+gH   Vt ++f+p+ +++las S+D t++lWd
  MMETSP1325-20131115|6017_1 113 EPLVDLHGHGRKVTLLRFHPTaSNVLASISADFTVKLWD 151
                 678889********************************9 PP

  == domain 3    score: 20.7 bits;  conditional E-value: 5.2e-08
                 SSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  10 HtspVtcvafspdgpllasgSrDgtirlWd 39 
                 H+  + ++ +spdg+  a++++D+++r+ d
  MMETSP1325-20131115|6017_1 165 HEQLIQDINWSPDGKTYATSCKDKKVRIVD 194
                 99999**********************976 PP

  == domain 4    score: -0.3 bits;  conditional E-value: 0.22
                 SEEEEEE CS
  PF00400.27  33 gtirlWd 39 
                 + i++Wd
  MMETSP1325-20131115|6017_1 236 RQIKIWD 242
                 689***8 PP

>> PF08953.6  Domain of unknown function (DUF1899)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0     5e-17   2.3e-13       6      65 .]       1      59 [.       1      59 [. 0.94

  Alignments for each domain:
  == domain 1    score: 49.4 bits;  conditional E-value: 5e-17
   PF08953.6  6 SkfRhVfGqpakkeqcyenirisksawdsnliavnpkflaviveasgGGaflVlPlnktG 65
                Sk+RhV++++ k+++ +en+r+++++ ++++i+ n+kf+av++ a+gGG++ +  + k G
  MMETSP1325-20131115|6017_1  1 SKYRHVYCEAPKHDEKFENLRLATTTGEQQYIKGNTKFIAVAL-AGGGGPVGIFEHDKPG 59
                9*****************************************9.899***9888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.36s 00:00:01.08 Elapsed: 00:00:00.51
# Mc/sec: 2025.16
//
Query:       MMETSP1325-20131115|6020_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 973.21
//
Query:       MMETSP1325-20131115|6021_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|6023_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   19.2  20.6     0.0028   18.0  14.3    1.6  1  PF12871.2  Pre-mRNA-splicing factor 38-associated hydrophilic C-term
     0.0065   14.8   0.0     0.0084   14.5   0.0    1.1  1  PF11864.3  Domain of unknown function (DUF3384)
  ------ inclusion threshold ------
       0.14   11.0   5.0       0.17   10.7   3.5    1.1  1  PF10037.4  Mitochondrial 28S ribosomal protein S27
       0.16   10.5   1.3       0.21   10.0   0.9    1.1  1  PF06785.6  Uncharacterised protein family (UPF0242)
       0.26   10.9   8.7       0.43   10.2   6.1    1.5  1  PF11671.3  Complementary sex determiner protein
       0.66    9.5   6.3       0.68    9.5   4.3    1.2  1  PF03105.14 SPX domain
        1.5    7.4  14.3          2    7.0   9.9    1.1  1  PF07946.9  Protein of unknown function (DUF1682)
        5.6    4.7  11.4        5.9    4.6   7.9    1.1  1  PF02724.9  CDC45-like protein
        7.8    5.1  10.6        9.1    4.9   7.3    1.2  1  PF14362.1  Domain of unknown function (DUF4407)
        8.8    5.9   7.7         11    5.5   5.3    1.4  1  PF02862.12 DDHD domain


Domain annotation for each model (and alignments):
>> PF12871.2  Pre-mRNA-splicing factor 38-associated hydrophilic C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0  14.3     2e-06    0.0028      36      79 ..      65     109 ..      24     113 .. 0.42

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2e-06
   PF12871.2  36 gqrap.rastrrsskerkrsrerrkrerdrdrrrdrsrddrdrdr 79 
                  ++++  a +r+++ e++r+ er++++rdrdr+rdr+r+drdrdr
  MMETSP1325-20131115|6023_1  65 KETTKeMAAEREREWESEREYERDNERRDRDRERDRDRRDRDRDR 109
                 332222233333333333333333333333333333333333333 PP

>> PF11864.3  Domain of unknown function (DUF3384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   6.1e-06    0.0084     268     344 ..       7      80 ..       2      87 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 6.1e-06
   PF11864.3 268 ledinllrGAVfflgmllwgsaeqripalnlspalvlsaLynslkrrqeiidlevlllirrlle...kkygaellkeewd 344
                  +d++ l GA+++l+    ++  ++++ +++  + ++++L++ l+++ + ++ ev  +i+++++   k++ ae  ++ew+
  MMETSP1325-20131115|6023_1   7 SDDMKRLIGAISILK---HQV--DKLSRDTVDKTALHEELHKELAENRDSVQKEVTSNIESMFKettKEMAAE-REREWE 80 
                 458889999999999...455..7789999999******************************7776666666.777886 PP

>> PF10037.4  Mitochondrial 28S ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.5   0.00012      0.17     320     406 ..      19     105 ..       2     115 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00012
   PF10037.4 320 llleeveksklkeeellaeyaesfqelseklqalekvelesllsvkerleaiekedleleeerqkewffenkkliqrkkkkrekade 406
                 +l  +v+k      +  a   e+++el+e +++ +k++  +++s+ ++ ++  +  +e e e ++e++ +n+++   +++ r   d+
  MMETSP1325-20131115|6023_1  19 ILKHQVDKLSRDTVDKTALHEELHKELAENRDSVQKEVTSNIESMFKETTKEMAAEREREWESEREYERDNERRDRDRERDRDRRDR 105
                 455566666655566677778999999999999999999999986666655555566666666667777776666666666655555 PP

>> PF06785.6  Uncharacterised protein family (UPF0242)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.9   0.00016      0.21     137     193 ..      11      68 ..       2      78 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00016
   PF06785.6 137 arlkeenqclklqldalvqecrekeeesqelnrelaetl.ayqqalndeyqatfseqr 193
                 +rl      lk q+d l++++ +k+   +el +elae   + q+++  + ++ f e  
  MMETSP1325-20131115|6023_1  11 KRLIGAISILKHQVDKLSRDTVDKTALHEELHKELAENRdSVQKEVTSNIESMFKETT 68 
                 5556666789***************************863678899999999998864 PP

>> PF11671.3  Complementary sex determiner protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   6.1   0.00031      0.43       4      47 ..      69     112 ..      42     126 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00031
   PF11671.3   4 krysrsrereqksyknensyreyretsrersrdrkerersrekk 47 
                 k+ +  rere  s ++ +   e r+  rer rdr++r+r+r+  
  MMETSP1325-20131115|6023_1  69 KEMAAEREREWESEREYERDNERRDRDRERDRDRRDRDRDRDGD 112
                 566778999999988888888999999************99865 PP

>> PF03105.14  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.3    0.0005      0.68     135     211 ..      23     109 ..       2     173 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0005
  PF03105.14 135 rrtkksdeykarqeeql..........yieaksffsdheamagpsnsvqakeksqekndqlqkqsndeessqesdserrelsrdses 211
                 + +k s+++      ++           + +k   s+ e+m++++ +++a e+++e +++++ ++++e ++++ + +r++++rd ++
  MMETSP1325-20131115|6023_1  23 QVDKLSRDTVDKTALHEelhkelaenrDSVQKEVTSNIESMFKETTKEMAAEREREWESEREYERDNERRDRDRERDRDRRDRDRDR 109
                 444444433332222224444555555555566667777777777777776665555555555544444444444443333333332 PP

>> PF07946.9  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   9.9    0.0015         2     229     320 ..       9     105 ..       2     106 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0015
   PF07946.9 229 dleelkkllklvlyliDklk.....klelreevlkkvkklReevekkllkakeeerqEeaqekkeekkkeereaklaklsaeeqrKleeKerkkeer 320
                 d+++l   ++ + + +Dkl+     k  l ee  k + ++R+ v k++  + e   +E  +e ++e+++e + +++ + ++e+ ++  e++r ++ r
  MMETSP1325-20131115|6023_1   9 DMKRLIGAISILKHQVDKLSrdtvdKTALHEELHKELAENRDSVQKEVTSNIESMFKETTKEMAAEREREWESEREYERDNERRDRDRERDRDRRDR 105
                 455566666666677777777888899*******************************************999999999***********9999987 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   7.9    0.0043       5.9     109     187 ..      39     118 ..      17     174 .. 0.48

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0043
   PF02724.9 109 eelekeeeerdayealvemkeeeeeesdedsdseddeeeeessasekrksesdedeeddddeeded.eeqrkrsnessl.........a 187
                 eel+         ++l e++++ ++e  ++ +s  +e  +e++a+++r++es+++ e d++++d d e+ r r+ +++           
  MMETSP1325-20131115|6023_1  39 EELH---------KELAENRDSVQKEVTSNIESMFKETTKEMAAEREREWESEREYERDNERRDRDrERDRDRRDRDRDrdgdvtgvvI 118
                 2222.........2222223333344444444444444444444444444444333333332222202222222221113333344550 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   7.3    0.0067       9.1     111     226 ..      38     170 ..      12     176 .] 0.60

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0067
   PF14362.1 111 dtelkekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGt.........ggtgvaG..kGpvykekkealdaaqaeletlkaqldaaqaelean......krkaaleeera 226
                 ++el ++ +e+ ++ q++v++++++  ++ t+e+aa ++   e ++e+++ +e+++++ e +         +   v G   G + +++++ +++ + e ++++a+ ++a +++ +       +r a l+++++
  MMETSP1325-20131115|6023_1  38 HEELHKELAENRDSVQKEVTSNIESMFKETTKEMAAEREREWESEREYERDNERRDRDRERDrdrrdrdrdRDGDVTGvvIGSAVQQARAGQAEMKGEGTAVTANAASATESAISVararslARIAPLTRNKH 170
                 5555555555556666666666666666666666666666666666666666666666665566666666644444442246777777777777776666666664444444443334435545544444444 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   5.3    0.0082        11      84     151 ..      25     103 ..       6     173 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0082
  PF02862.12  84 kksklgaleekesltnigkavkqsvesltsslsegiasslrnsslslssedeeseeeseasklsqks...........k 151
                  k ++ +++++ + ++++k++ ++ +s+++++++ i s ++++ +++  e e + e++ + +++++            +
  MMETSP1325-20131115|6023_1  25 DKLSRDTVDKTALHEELHKELAENRDSVQKEVTSNIESMFKETTKEMAAEREREWESEREYERDNERrdrdrerdrdrR 103
                 4455555666677777777777777777777777777777777777776666666666655553222111111111110 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1582  (0.115711); expected 273.4 (0.02)
Passed bias filter:                      641  (0.0468841); expected 273.4 (0.02)
Passed Vit filter:                        89  (0.00650965); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.65u 0.40s 00:00:01.05 Elapsed: 00:00:00.52
# Mc/sec: 811.07
//
Query:       MMETSP1325-20131115|6025_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      425  (0.0310854); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 520.06
//
Query:       MMETSP1325-20131115|6026_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|6024_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-13   48.3   0.0    7.1e-13   48.0   0.0    1.1  1  PF00085.15 Thioredoxin
  ------ inclusion threshold ------
        0.1   12.5   0.0       0.13   12.1   0.0    1.2  1  PF07306.6  Protein of unknown function (DUF1455)
       0.14   12.2   0.1       0.78    9.8   0.1    2.0  1  PF13098.1  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   1.5e-16   7.1e-13       4      85 ..      28     110 ..      25     132 .. 0.89

  Alignments for each domain:
  == domain 1    score: 48.0 bits;  conditional E-value: 1.5e-16
                 ESSHHHHHHHHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-..TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEE CS
  PF00085.15   4 vltkenfeeevaksdklvlvefyApwCGhCkalaPeyeklaeelke..kvvlakvdvdenkdlaseygvegiPtlklfkngkkv 85 
                 +++++++++ +++++k+vl++fy+p C  C  + Pe+e +a++++e  ++ + +v+   ++d+++e+gv+g+P +k++k+g+  
  MMETSP1325-20131115|6024_1  28 EVDSDSYKS-ITDGSKNVLLKFYTPDCHMCDVIDPEFEYAASKYDEgdEMLFGRVNGYRERDIVDELGVTGYPVFKWWKKGESE 110
                 556666665.5666*********************************9********************************9875 PP

>> PF07306.6  Protein of unknown function (DUF1455)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     3e-05      0.13       1      18 [.       1      18 [.       1      43 [. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3e-05
   PF07306.6  1 mscrafslkgllifallp 18
                msc+af lkgll+  ll 
  MMETSP1325-20131115|6024_1  1 MSCKAFLLKGLLLVGLLS 18
                9************99984 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00017      0.78       4      29 ..      40      65 ..      37     111 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00017
   PF13098.1  4 ngkrvivvftdpdCpyCkklhkelkk 29
                  k v++ f +pdC  C  +++e + 
  MMETSP1325-20131115|6024_1 40 GSKNVLLKFYTPDCHMCDVIDPEFEY 65
                5799**************99999873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 685.36
//
Query:       MMETSP1325-20131115|6027_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 315.08
//
Query:       MMETSP1325-20131115|6029_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   13.8   0.0      0.042   13.1   0.0    1.3  1  PF00270.24 DEAD/DEAH box helicase


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.1e-06     0.042     138     173 .]       1      38 [.       1      38 [. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.1e-06
                 TTTHHHHHHHHHHSHHT.TTSE.EEEEESS-THHHHHH CS
                 xxxxxxxxxxxxxxxxx.xxxx.xxxxxxxxxxxxxxx RF
  PF00270.24 138 qgfsdqlnqilqilcdg.krlq.vivlSATlpkdvkkl 173
                 +gf++ql++i ++ + + k+l+ ++++SAT+ ++v+k+
  MMETSP1325-20131115|6029_1   1 MGFEPQLRRICEQADLPpKHLRiTLMFSATFADQVQKI 38 
                 58999****99996555466788*********999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|6030_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.4   0.0      0.011   15.3   0.0    1.1  1  PF04803.7  Cor1/Xlr/Xmr conserved region
      0.014   15.1   0.3      0.019   14.7   0.2    1.2  1  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
      0.024   14.2   0.4      0.027   14.1   0.3    1.0  1  PF05597.6  Poly(hydroxyalcanoate) granule associated protein (phasin)
      0.027   14.2   0.1       0.03   14.1   0.1    1.1  1  PF01109.12 Granulocyte-macrophage colony-stimulating factor
       0.11   11.7   0.5         21    4.4   0.0    2.9  3  PF10393.4  Trimeric coiled-coil oligomerisation domain of matrilin
       0.11   11.8   0.0       0.13   11.6   0.0    1.1  1  PF01442.13 Apolipoprotein A1/A4/E domain
       0.11   12.0   0.2       0.16   11.6   0.1    1.4  1  PF13758.1  Prefoldin subunit
       0.14   11.9   0.4       0.18   11.5   0.3    1.1  1  PF06103.6  Bacterial protein of unknown function (DUF948)


Domain annotation for each model (and alignments):
>> PF04803.7  Cor1/Xlr/Xmr conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.0   6.5e-06     0.011      18      65 ..      15      62 ..       3      76 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 6.5e-06
   PF04803.7 18 slkaseqkleqlwktqqeerqklnqeysqqfltllqqweadvqkleeq 65
                   + ++k++++ +t+++e +k+++e+  +++++ +++   + ++ e 
  MMETSP1325-20131115|6030_1 15 LTIEFQNKVDDMANTHKDEVAKITEEFEGKVTHITEHLGGKITHITEH 62
                5557899**************************999988777776664 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.2   1.1e-05     0.019      25      94 ..      10      74 ..       7      78 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.1e-05
   PF04513.7 25 irlqnvqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsil 94
                i l n +i  + ++ +d++++   + ++++ +  +e++ ++++ +++L  ++ ++++ l  +Lt ln  l
  MMETSP1325-20131115|6030_1 10 IALRNLTI--EFQNKVDDMAN---THKDEVAKITEEFEGKVTHITEHLGGKITHITEHLGGKLTQLNERL 74
                55555555..45555555555...4445666666677778888888888888888888888888888766 PP

>> PF05597.6  Poly(hydroxyalcanoate) granule associated protein (phasin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   1.6e-05     0.027      62     126 ..      11      75 ..       1      78 [. 0.81

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.6e-05
   PF05597.6  62 qveevkesvkskveevkekaeeqwdklekafdervakaLnrLgvpskkdveaLsakideLtakle 126
                 ++++++ + ++kv+++ ++ ++++ k+++ f+ +v+++ ++Lg    +  e+L  k+ +L+++l+
  MMETSP1325-20131115|6030_1  11 ALRNLTIEFQNKVDDMANTHKDEVAKITEEFEGKVTHITEHLGGKITHITEHLGGKLTQLNERLD 75 
                 44455566788999999999999999*****************99999999*******9999987 PP

>> PF01109.12  Granulocyte-macrophage colony-stimulating factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   1.7e-05      0.03      23      81 ..      17      78 ..       3      79 .] 0.81

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.7e-05
  PF01109.12 23 lsllnessdlaavlneevevvseefdlqept...clqtrlklykqGlrGsltklkgaltlla 81
                +++ n+ +d+a++  +ev  ++eef+ +       l  ++    + l G+lt+l++ l l++
  MMETSP1325-20131115|6030_1 17 IEFQNKVDDMANTHKDEVAKITEEFEGKVTHiteHLGGKITHITEHLGGKLTQLNERLDLMT 78
                5677999******************9875431124667889999**************9985 PP

>> PF10393.4  Trimeric coiled-coil oligomerisation domain of matrilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.012        21      14      23 ..      16      25 ..      14      39 .. 0.87
   2 ?    1.9   0.0     0.076   1.3e+02      16      39 ..      40      63 ..      37      74 .. 0.73
   3 ?    3.3   0.1     0.027        47      24      36 ..      66      78 ..      63      79 .] 0.87

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.012
   PF10393.4 14 ivaFQrkvee 23
                +++FQ+kv +
  MMETSP1325-20131115|6030_1 16 TIEFQNKVDD 25
                699*****76 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.076
   PF10393.4 16 aFQrkveeeiqkLtqKLeavtkrL 39
                +F+ kv+   + L  K+  +t+ L
  MMETSP1325-20131115|6030_1 40 EFEGKVTHITEHLGGKITHITEHL 63
                577888888888888888888754 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.027
   PF10393.4 24 eiqkLtqKLeavt 36
                ++ +L+ +L+ +t
  MMETSP1325-20131115|6030_1 66 KLTQLNERLDLMT 78
                6889******887 PP

>> PF01442.13  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.6e-05      0.13      71     125 ..      18      72 ..       5      77 .. 0.55

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.6e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHH------ CS
  PF01442.13  71 elrqrlkpyaeelreqlnrdveelreqLapvaeelrsrlrqnvealkerLaPyae 125
                 e +++++ +a+  ++++++ +ee+  ++++  e l  ++ + +e+l  +L  + e
  MMETSP1325-20131115|6030_1  18 EFQNKVDDMANTHKDEVAKITEEFEGKVTHITEHLGGKITHITEHLGGKLTQLNE 72 
                 4455555555555555555555555555555555555555555555444443333 PP

>> PF13758.1  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   9.1e-05      0.16      16      58 ..      14      54 ..       3      78 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.1e-05
   PF13758.1 16 elkeelee.lkeeddatkedllrirrdfegslvnekeikeilge 58
                +l  e+++ +++  ++ k+++++i+++feg++     i e lg 
  MMETSP1325-20131115|6030_1 14 NLTIEFQNkVDDMANTHKDEVAKITEEFEGKV---THITEHLGG 54
                5555554414446788999************4...456666643 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3    0.0001      0.18      16      72 ..      15      72 ..       9      77 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.0001
   PF06103.6 16 fliktlkklkktldevnktvkkltkqvdg.itketeellaktnelleDvneKvetldp 72
                 +i + +k++++ ++ ++ v+k+t++ +g +t+ te l  k   ++e + +K ++l++
  MMETSP1325-20131115|6030_1 15 LTIEFQNKVDDMANTHKDEVAKITEEFEGkVTHITEHLGGKITHITEHLGGKLTQLNE 72
                456778889999999999999999999864888889999999***********99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       790  (0.0577823); expected 273.4 (0.02)
Passed bias filter:                      683  (0.0499561); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.41u 0.41s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 338.06
//
Query:       MMETSP1325-20131115|6031_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.2    8.4   9.1        1.5    8.1   6.3    1.0  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   6.3   0.00011       1.5      61      94 ..       6      37 ..       2      50 .. 0.39

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00011
   PF10500.4 61 ssssssssssssssssssskseekrkkrkkkkkk 94
                s++ss+ sss sss+   s +++k kk  kk+++
  MMETSP1325-20131115|6031_1  6 SNNSSTNSSSLSSSN--YSVRSNKPKKASKKHDR 37
                333333333333333..22233333332222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       593  (0.0433733); expected 273.4 (0.02)
Passed bias filter:                      462  (0.0337917); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 300.63
//
Query:       MMETSP1325-20131115|6032_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       553  (0.0404476); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|6033_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 448.77
//
Query:       MMETSP1325-20131115|6034_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   13.4   0.1        0.1   12.6   0.0    1.5  2  PF04806.7 EspF protein repeat


Domain annotation for each model (and alignments):
>> PF04806.7  EspF protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.37     5e+03      36      41 ..      10      15 ..       3      20 .. 0.51
   2 ?   12.6   0.0   7.4e-06       0.1      24      44 ..      24      45 ..      21      47 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.37
   PF04806.7 36 aqrLvq 41
                  r+v 
  MMETSP1325-20131115|6034_1 10 DSRVVA 15
                344443 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 7.4e-06
   PF04806.7 24 vqneqsrPLPDvaqr.LvqhLa 44
                v  eq rP+ Dva r Lv h a
  MMETSP1325-20131115|6034_1 24 VTPEQLRPIADVALRfLVTHEA 45
                677**********995677755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 209.68
//
Query:       MMETSP1325-20131115|6035_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.71
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6037_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 162.77
//
Query:       MMETSP1325-20131115|6038_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 603.88
//
Query:       MMETSP1325-20131115|6040_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.32s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 763.49
//
Query:       MMETSP1325-20131115|6039_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.04   13.8   0.0      0.075   12.9   0.0    1.4  1  PF12591.3 Protein of unknown function (DUF3762)


Domain annotation for each model (and alignments):
>> PF12591.3  Protein of unknown function (DUF3762)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   5.5e-06     0.075      34      73 ..      92     132 ..      84     136 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.5e-06
   PF12591.3  34 ldyhaaetdfrdeekhvryvyndvssaanrprtvss.rkcg 73 
                 ldy   +t  ++ + hvr vy+ +s   n  rtv    kcg
  MMETSP1325-20131115|6039_1  92 LDYIDYDTRDKTFDAHVRKVYQIMSVLMNYKRTVKDfEKCG 132
                 78888899999999********************8647999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 1143.26
//
Query:       MMETSP1325-20131115|6044_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 382.50
//
Query:       MMETSP1325-20131115|6046_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.6   0.3        1.5    8.9   0.1    2.1  2  PF02377.10 Dishevelled specific domain


Domain annotation for each model (and alignments):
>> PF02377.10  Dishevelled specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00011       1.5      33      63 ..      17      46 ..       8      49 .. 0.80
   2 ?    4.0   0.0    0.0037        51      44      73 .]      59      88 ..      53      88 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00011
  PF02377.10 33 tdssstlLsSelestSlfdseeddtlsRlss 63
                  +s   L+S l s+  fd ee+d  + ls+
  MMETSP1325-20131115|6046_1 17 CRKSLVRLASPLKSS-YFDDEEEDPADFLSD 46
                556667799999998.9*******9999987 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0037
  PF02377.10 44 lestSlfdseeddtlsRlsssTeqSsasRL 73
                l+ +S+ ++ +dd   R+ +  e+  a+R+
  MMETSP1325-20131115|6046_1 59 LDVASFAGAIDDDEAARIKQAKEFDRAQRM 88
                8999**************999999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 450.52
//
Query:       MMETSP1325-20131115|6042_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0054   15.9   3.0      0.038   13.1   0.4    2.1  2  PF13136.1  Protein of unknown function (DUF3984)
  ------ inclusion threshold ------
        3.8    7.2   8.1        6.9    6.4   5.6    1.4  1  PF03032.10 Brevenin/esculentin/gaegurin/rugosin family


Domain annotation for each model (and alignments):
>> PF13136.1  Protein of unknown function (DUF3984)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.4   5.6e-06     0.038     164     221 ..      13     102 ..       3     118 .. 0.66
   2 !    3.0   0.1    0.0064        44     189     238 ..     214     265 ..     164     283 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 5.6e-06
   PF13136.1 164 deeeeaeerelarerel............................asrrasrrgr.sgvstpsaalsrrgSraaSrrgsradl....amtp 221
                 deee++ee+e  r+ ++                            +sr +sr +  s vs+  +  s  +S+aaSrrgsr+d     +mt+
  MMETSP1325-20131115|6042_1  13 DEEEDEEEEEGMRSVQElgggdmdvdeplshglgalgrglmlglgTSRPESRASYtSCVSSTGPEWS-PPSHAASRRGSRSDStaddSMTS 102
                 5555555555555555578888888899888888888888888877888888776555555534444.44888888888888733334444 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.0064
   PF13136.1 189 grsgvstp..saalsrrg..SraaSrrgsradlamtplearrldeeyfdssess 238
                 +rsg+ t+  s+a s     Sr +S  gs  +   ++ e+  +d++ f +  + 
  MMETSP1325-20131115|6042_1 214 SRSGSNTQlpSVASSSYTfvSRGSSSNGSIGHSNVSSYEL--VDDDAFLRGLAR 265
                 3344445444899998888999999999999988888877..345555544444 PP

>> PF03032.10  Brevenin/esculentin/gaegurin/rugosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.6     0.001       6.9      23      43 ..       8      28 ..       4      30 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.001
  PF03032.10 23 eekredeeeneeeeekeeqse 43
                eek edeee+eeeee++++ +
  MMETSP1325-20131115|6042_1  8 EEKAEDEEEDEEEEEGMRSVQ 28
                9******99998998887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.40s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 1527.68
//
Query:       MMETSP1325-20131115|6047_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|6049_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-12   47.9  13.9    4.6e-10   39.5   3.4    1.6  2  PF13517.1  Family description
  ------ inclusion threshold ------
      0.037   13.6   2.8      0.037   13.6   1.9    2.2  2  PF01839.18 FG-GAP repeat


Domain annotation for each model (and alignments):
>> PF13517.1  Family description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   3.4   6.8e-14   4.6e-10       5      60 ..       2      59 ..       1      60 [. 0.85
   2 !   19.2   1.1   1.5e-07     0.001       1      27 [.      49      75 ..      49      76 .. 0.82

  Alignments for each domain:
  == domain 1    score: 39.5 bits;  conditional E-value: 6.8e-14
   PF13517.1  5 DGdlDlvvag..dgglrlylnngdGtftdvaetslgaggggtgvafgDldgDGdlDll 60
                DGd D++ a+  d+++ +y n+g    +++++t  ++ +g+++v + D+dgDGd D+l
  MMETSP1325-20131115|6049_1  2 DGDVDVLSASysDDTIAWYENDGGSPPSFTTRTITTSANGARSVFAIDVDGDGDVDVL 59
                *********63367777777877777889999999999999***************97 PP

  == domain 2    score: 19.2 bits;  conditional E-value: 1.5e-07
   PF13517.1  1 DldgDGdlDlvvagdgglrlylnngdG 27
                D+dgDGd D++ a++   ++ +++ dG
  MMETSP1325-20131115|6049_1 49 DVDGDGDVDVLSASQYDDTIAWYESDG 75
                9************97777777776666 PP

>> PF01839.18  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.2     0.048   3.3e+02      13      21 ..       2      10 ..       1      27 [. 0.69
   2 ?   13.6   1.9   5.4e-06     0.037       4      21 ..      43      61 ..      40      76 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.048
                --S-EEEEE CS
  PF01839.18 13 DGrpDlavG 21
                DG+ D++  
  MMETSP1325-20131115|6049_1  2 DGDVDVLSA 10
                899999873 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 5.4e-06
                CEEEE.-TT---S-EEEEE CS
  PF01839.18  4 svavg.DfnGDGrpDlavG 21
                    + D++GDG+ D++  
  MMETSP1325-20131115|6049_1 43 RSVFAiDVDGDGDVDVLSA 61
                444555**********974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.67
# Mc/sec: 275.40
//
Query:       MMETSP1325-20131115|6053_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.004   16.4   0.0     0.0041   16.4   0.0    1.0  1  PF05473.7 UL45 protein
  ------ inclusion threshold ------
      0.037   13.6   0.9      0.043   13.4   0.6    1.1  1  PF07926.7 TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> PF05473.7  UL45 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0     6e-07    0.0041      85     149 ..       9      76 ..       1      91 [. 0.85

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 6e-07
   PF05473.7  85 CpaewiglgdsCvravgkpadtyeeakavCralseklissskakllltlldvlastsassseqk....v 149
                  p+++ g ++sC +a   p  t +  +  Cr+ s  ++++ + k+ l+ ++v+ +++++   ++    +
  MMETSP1325-20131115|6053_1   9 SPDGTTGTEESCTSAKTDPS-TLSTSGSECRDESDAVVTKKQLKQALKSIKVFKQQQQQLFDEFvllrS 76 
                 699***********999998.**********************************99998888854442 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.6   6.4e-06     0.043      59     121 ..      18      85 ..      13      93 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6.4e-06
   PF07926.7  59 qeLtklkkelaelqkeaselrkeads..akaelneleekwe...eeksmLevelselekkieelneqN 121
                 ++ t++k++ + l+++ se+r+e d+  +k++l+++ ++++   +++++L +e   l++k+++l+++ 
  MMETSP1325-20131115|6053_1  18 ESCTSAKTDPSTLSTSGSECRDESDAvvTKKQLKQALKSIKvfkQQQQQLFDEFVLLRSKYDDLKKKT 85 
                 5568889999999999999999999844589999999998622267889999************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1252  (0.091574); expected 273.4 (0.02)
Passed bias filter:                      902  (0.0659743); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.47s 00:00:00.90 Elapsed: 00:00:00.66
# Mc/sec: 355.82
//
Query:       MMETSP1325-20131115|6051_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-17   63.1   0.1      3e-17   62.8   0.0    1.1  1  PF02096.15 60Kd inner membrane protein
  ------ inclusion threshold ------
      0.017   14.3   1.4      0.025   13.8   1.0    1.2  1  PF05308.6  Mitochondrial fission regulator
      0.023   13.8   1.8      0.023   13.8   0.5    1.5  2  PF12312.3  Nepovirus subgroup A polyprotein
      0.038   13.1   1.8      0.054   12.6   1.2    1.2  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF02096.15  60Kd inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.0   8.8e-21     3e-17      99     194 ..       8     127 ..       2     129 .. 0.86

  Alignments for each domain:
  == domain 1    score: 62.8 bits;  conditional E-value: 8.8e-21
  PF02096.15  99 eeasflwiedL.......sapda................lipllilpilagltlflsqklssk.s.qkskdkqaaaqqkimnyimplmflfiflsfPaglllYwvvsnlfqilqqlllnke 194
                  +++flw+++L       +++d+                ++ +l lp+++++++ +sq+l +  + +++ d++aaa+q+i++ ++plm++f++l++P+gl +Ywv++n+++++ +l++++ 
  MMETSP1325-20131115|6051_1   8 LDEPFLWLPNLegpvygsQSSDWlfknwvdgapslgwhdTLCFLSLPVILVISQSISQRLLTPpKpAEELDEAAAASQQIVQ-YLPLMIGFFALNVPSGLAVYWVTNNFVSTASTLIVKSN 127
                 5789**9999977776655555599999999999999998999*****************7776666888899999999999.8*********************************9875 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.0   7.2e-06     0.025     170     218 ..     116     169 ..     100     193 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 7.2e-06
   PF05308.6 170 sstasvvisdpteepelevp........pppppPpPlpavslqqsasaielikerke 218
                 +stas++i++ + + ++e++          pppPpP+++    ++as++e+  e+  
  MMETSP1325-20131115|6051_1 116 VSTASTLIVKSNVAKQMEASgigtasvaTAPPPPPPPQS---SSPASFSEMMAESTP 169
                 488999999998888888889999988644444444444...345555555555544 PP

>> PF12312.3  Nepovirus subgroup A polyprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.78   2.7e+03     230     248 ..      95     113 ..      66     122 .. 0.59
   2 ?   13.8   0.5   6.6e-06     0.023     198     224 ..     142     168 ..     130     181 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.78
   PF12312.3 230 arafaletslGlnkawvgl 248
                    fal+   Gl + wv+ 
  MMETSP1325-20131115|6051_1  95 IGFFALNVPSGLAVYWVTN 113
                 3467888888888888765 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 6.6e-06
   PF12312.3 198 gpalpppppppliqkppsfeerlreac 224
                 +++ ppppppp+  +p sf e ++e  
  MMETSP1325-20131115|6051_1 142 VATAPPPPPPPQSSSPASFSEMMAEST 168
                 5678999**************998876 PP

>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.2   1.6e-05     0.054     211     258 ..     124     172 ..     100     182 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.6e-05
                 ---..--CSC--XXXXXXXXXXXXXXXXXXXX.........XXXXXX.. CS
  PF01213.14 211 kkgdaaaaksalaavsasktaaPppPpppppP.svdtikdsvesaksds 258
                  k ++a+++ a    +as ++aPppPppp +  ++++ +   es++++s
  MMETSP1325-20131115|6051_1 124 VKSNVAKQMEASGIGTASVATAPPPPPPPQSSsPASFSEMMAESTPTES 172
                 4556677777777667776666666655554425666666666666644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1095.48
//
Query:       MMETSP1325-20131115|6055_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|6052_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-09   38.0   0.0    1.8e-09   37.4   0.0    1.3  1  PF00535.21 Glycosyl transferase family 2
    7.9e-05   22.4   0.1    0.00018   21.2   0.0    1.6  1  PF13641.1  Glycosyltransferase like family 2
     0.0012   17.9   0.0     0.0017   17.4   0.0    1.2  1  PF10111.4  Glycosyltransferase like family 2


Domain annotation for each model (and alignments):
>> PF00535.21  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.0   3.9e-13   1.8e-09      17     128 ..      46     163 ..      40     224 .. 0.73

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 3.9e-13
                 HHHHHT-S---EEEEEEE-S--HHHHHHHGGGGG........E------HHHHHS-HHHHHHHHHHHH----EEEEEETTEEE-TTHHHHHHHHHHH.-T..T--EEEEEEEEEEE---- CS
  PF00535.21  17 lesllnqtypnfeiivvDDgStDetveileeyak........sdprvrvirleknvGkagarnaglkkatgdyilflDaDdepdpdwleklveklekdgadvvigsrvrifgetdpnkrn 128
                 le+ ++    + +iivv  gS ++ +++++e              ++ ++r++  + ++ +rn+g+++at+ +++f+DaDd+p++d++  l++ +e + +    +++ +++   d   ++
  MMETSP1325-20131115|6052_1  46 LECTARGVVLPRQIIVVLAGSDPNNPNLVQEETFrhrwqarmPQVDFLLLRNTGPQLPGFNRNMGIEAATSSILTFFDADDVPTRDRIATLLGIFELHSD--LDYVIHHFQRFSDASIPA 163
                 55555555567788888888877777777776556777774444556667777777899*************************************9988..555555544444444444 PP

>> PF13641.1  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0     4e-08   0.00018      42     202 ..      75     251 ..      38     275 .. 0.67

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 4e-08
   PF13641.1  42 daetldvaeelaaaypdvrvrvvvrprnpgptgkaralnealqaiksdlvlllDaDsvvdpdtlrrllpff.lskgvglvq..gpvlvla...rrsl...lsalqa......lefaerhlrfmalrra............lgva.plaGsgllirrsvleelggfdpgfilteDyelglrlrragyrta 202
                 ++et++   +++a+ p v+  +++++   gp   + + n +++a++s++++++DaD+v+ +d +  ll  f l+++ + v    +++++a   ++s+        +      +e +e + r m+ +++              ++ + +G+ + +rr+v++e  +f++ + ++eD  +g +++ +g++  
  MMETSP1325-20131115|6052_1  75 QEETFR--HRWQARMPQVDFLLLRNT---GPQLPGFNRNMGIEAATSSILTFFDADDVPTRDRIATLLGIFeLHSDLDYVIhhFQRFSDAsipAESWradN----RtvphlfFEKGETK-RKMPSKLRapwlfnwdgqvdRERLfFANGWPT-VRRHVVDEGIRFGG-GRVGEDSAFGIQAMLKGFEAN 251
                 355554..567888888887777665...5555666789*********************************88888877732344555433244444441....24555324444444.44555533366666665654345514578766.69999999999999.999******999999999865 PP

>> PF10111.4  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   3.7e-07    0.0017      76     111 ..     103     138 ..      75     154 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 3.7e-07
   PF10111.4  76 pakaRNrgaeksesdvilflDvDllisedllekiik 111
                 p+  RN g+e ++s ++ f+D+D +++ d ++ ++ 
  MMETSP1325-20131115|6052_1 103 PGFNRNMGIEAATSSILTFFDADDVPTRDRIATLLG 138
                 6778*************************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1286.93
//
Query:       MMETSP1325-20131115|6054_1  [L=446]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.34s 00:00:01.11 Elapsed: 00:00:00.54
# Mc/sec: 1979.21
//
Query:       MMETSP1325-20131115|6045_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 1113.86
//
Query:       MMETSP1325-20131115|6060_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.56
# Mc/sec: 193.39
//
Query:       MMETSP1325-20131115|6058_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 1063.98
//
Query:       MMETSP1325-20131115|6062_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       661  (0.048347); expected 273.4 (0.02)
Passed bias filter:                      421  (0.0307929); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.44s 00:00:01.05 Elapsed: 00:00:00.56
# Mc/sec: 1307.49
//
Query:       MMETSP1325-20131115|6064_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-11   43.4   0.1    2.6e-11   43.1   0.1    1.1  1  PF07647.12 SAM domain (Sterile alpha motif)
    5.4e-10   39.2   0.0    7.9e-10   38.6   0.0    1.2  1  PF00536.25 SAM domain (Sterile alpha motif)


Domain annotation for each model (and alignments):
>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.1   3.8e-15   2.6e-11       4      64 ..      35      96 ..      32      98 .. 0.94

  Alignments for each domain:
  == domain 1    score: 43.1 bits;  conditional E-value: 3.8e-15
                -HHHHHHHHHHHT--CCSHHHHHHHTS-SCTCC..CSSCHHHHHCCCHHCHHHHHHHHHHHHC CS
  PF07647.12  4 wsledvaeWLrsiglkqYtenFrdqgitggell..lrlteedLkrlGitsvghrkkilkkiqe 64
                 s++dv +WL + +l+ +++ + ++ i+g  +l  ++l e+dL++lGit+  hr++il+ ++e
  MMETSP1325-20131115|6064_1 35 LSFHDVRSWLCAENLETCANELARHRIDG-AMLadEELGEQDLQELGITLRLHRRRILSLVNE 96
                689**************************.9999************************97775 PP

>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.0   1.2e-13   7.9e-10       4      60 ..      36      94 ..      33      97 .. 0.93

  Alignments for each domain:
  == domain 1    score: 38.6 bits;  conditional E-value: 1.2e-13
                T-SSHHHHHHHTT-GGGHHHHHCT--SHHHHT..T--HHHHHHH-------HHHHHHHH CS
  PF00536.25  4 svedVgeWLesiglgqYvdnFrageidgdall..llteedLeklgvtllGHrkkIlssI 60
                s+ dV+ WL +  l+ ++++ ++++idg +l+  +l e+dL++lg+tl  Hr +Ils +
  MMETSP1325-20131115|6064_1 36 SFHDVRSWLCAENLETCANELARHRIDGAMLAdeELGEQDLQELGITLRLHRRRILSLV 94
                899****************************8557*********************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.43s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 853.70
//
Query:       MMETSP1325-20131115|6063_1  [L=401]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-45  152.7   0.3    1.3e-44  152.1   0.2    1.3  1  PF01434.13 Peptidase family M41


Domain annotation for each model (and alignments):
>> PF01434.13  Peptidase family M41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.1   0.2   9.3e-49   1.3e-44       1     213 []      78     281 ..      78     281 .. 0.95

  Alignments for each domain:
  == domain 1    score: 152.1 bits;  conditional E-value: 9.3e-49
                 -CHHHHHCCHHHH------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXX.XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01434.13   1 tmkeleeaidrvlaGlekksrvisekekklvAyHEaGHalvglllkeadpveKvtiiPRgqalGltlflpeedkllltkeqllariavllgGraaEelifgedevttGasnDlekvtklarqmvtefGms..eklGpvaleeeeeeevflgrelkkekelseetaeeideevkelveeayerakeilkenreelealaeaLlekEtldaeeieel 213
                 tm++++ea+dr+  Gl + srv+  ++++ +A HEaGHa+v+++  +a+p  K++i+ Rg++lG++++ p e  ++ t+  + ++++v+l+Gr++Ee+++g  + +tGasnDle+vt++a+ +v + G+s  +klG +al  + ++       + +e++lse t +++d+e ++lv+++y++++++++++ + +e+la aL e+++l + ++e++
  MMETSP1325-20131115|6063_1  78 TMTHFSEALDRMQGGLVR-SRVMAAQDRHRTAIHEAGHAVVAWFSTNANPPVKASIVWRGETLGFVQSKPLER-HSKTRIVYEDEMKVMLAGRVTEEVLLG--DSSTGASNDLERVTDMAYYLVGKVGLSgsDKLGLMALLGRRGR-------TPHESALSEVTSSALDAEARRLVNQQYKATTALVRSKVHLVEKLAAALEEHDVLLEPDLERI 281
                 699**************9.9**************************************************998.6899***********************..99************************54499*****9997773.......456889************************************************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.42s 00:00:01.06 Elapsed: 00:00:00.60
# Mc/sec: 1601.57
//
Query:       MMETSP1325-20131115|6059_1  [L=520]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   57.6   0.0    1.3e-14   54.4   0.0    2.2  1  PF00300.17 Histidine phosphatase superfamily (branch 1)
    2.1e-12   46.7   0.0    3.9e-12   45.8   0.0    1.4  1  PF00293.23 NUDIX domain
  ------ inclusion threshold ------
      0.053   12.7   0.3       0.13   11.5   0.2    1.7  1  PF03832.8  WSK motif
      0.077   12.7   0.0       0.14   11.9   0.0    1.3  1  PF05595.6  Domain of unknown function (DUF771)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   0.0   3.9e-18   1.3e-14       1      97 [.       4     102 ..       4     224 .. 0.70

  Alignments for each domain:
  == domain 1    score: 54.4 bits;  conditional E-value: 3.9e-18
                 EEEEEE---BHCC.CTTBGGGTCC...-.-B-----HHHHHHHTHHHHTTHCESEEEEESSHHHHHHHHHHCCCCEEEEEE.GGGSHHHH----TTCHHHHH CS
  PF00300.17   1 rlylvRHGeseln.kegrlqgwsd...v.pLtekGreqarelgkkLkradlqidavytSplkRaiqTaeilleeldipiiqeprLrerdfgeweglpkaevk 97 
                 r++l+RH++se + +++r + +s+   + p+t  G +qa+++  +L++ +  ++ v++Spl+Ra+qTa i+ +++++pii  p   e+d g   g+p++  +
  MMETSP1325-20131115|6059_1   4 RVVLIRHAQSEAQaCRDRAERKSErmlDcPITRSGVKQAEHVN-YLRQFGAAPELVVVSPLTRALQTACIIFKGMGCPIIAHPSCAELDSG--SGMPENTRR 102
                 699********5554444444444566449*************.**********************************************8..566664333 PP

>> PF00293.23  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   1.1e-15   3.9e-12       6     121 ..     341     458 ..     336     472 .. 0.80

  Alignments for each domain:
  == domain 1    score: 45.8 bits;  conditional E-value: 1.1e-15
                 EEEEEETTS.EEEEEEECSTTSSTTEEEESBEEETTTTSHHHHHHHHHHHHHHS-EEEEEEEEEEEEEEETTCCC......SEEEEEEEEEEEEETGGGCSTTTS.TEEEEEEEEHHHHHHHHH CS
  PF00293.23   6 svillnedg.kvLlvqrsrskltapglwefPgGkvdkgEspeeaAvRElkEEtGidlekvrlvgvanydaptddp......kreevifflaelpddepeiilntt.Evsevrwvpleelldlal 121
                 ++ ++n +g k +l+ ++r+     g+ + P+G+  kgEs+ + A RE +EEtG+d+ k ++ g+ + +a t+ +      +++ + ++ ++    + e+++ ++  v +vrwvp+e l+++  
  MMETSP1325-20131115|6059_1 341 IIAVANVQGrKYVLLTHNRK-----GVASYPKGGRNKGESIRANAMREWMEETGLDPLKLEFSGGHIDEAHTGCRylgakwPGKGQRVVTGATWTPP-EEDPLDDcPVVSVRWVPIEALPNQHG 458
                 45677788887777777777.....79*****************************99999999999999999889*****6666666666666666.455555558************99865 PP

>> PF03832.8  WSK motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   3.7e-05      0.13      16      31 .]     161     176 ..     161     176 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.7e-05
   PF03832.8  16 pRKkskssseqkpeea 31 
                 ++++s+++ eq+p+++
  MMETSP1325-20131115|6059_1 161 GKRRSRDPQEQDPADG 176
                 79***********985 PP

>> PF05595.6  Domain of unknown function (DUF771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.1e-05      0.14      58      85 ..     357     387 ..     348     390 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.1e-05
   PF05595.6  58 ng..gfvvyPkgkgkk.ylinakkmkkflee 85 
                 ++  g+  yPkg ++k  +i+a +m++++ee
  MMETSP1325-20131115|6059_1 357 HNrkGVASYPKGGRNKgESIRANAMREWMEE 387
                 44459******666666*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.38s 00:00:01.22 Elapsed: 00:00:00.71
# Mc/sec: 1755.08
//
Query:       MMETSP1325-20131115|6067_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-09   38.5   5.6    1.1e-09   38.5   3.9    1.9  2  PF04116.8 Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> PF04116.8  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.14   1.9e+03      42      57 ..      76      91 ..      56     110 .. 0.47
   2 !   38.5   3.9   8.3e-14   1.1e-09       2      48 ..     128     177 .]     127     177 .] 0.88

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.14
   PF04116.8 42 tafrihplealllall 57
                taf ++ +++l++a l
  MMETSP1325-20131115|6067_1 76 TAFSLSSVNMLFWAYL 91
                2222333333333332 PP

  == domain 2    score: 38.5 bits;  conditional E-value: 8.3e-14
   PF04116.8   2 llallladfveylvHrllH.evpf.lw.rfHkvHHssesltaltafrihp 48 
                 l ++++ df++y++Hr++H + p+ l+  +Hk+HH+++++ a++a ++hp
  MMETSP1325-20131115|6067_1 128 LGCAVVIDFWFYWTHRIMHwKEPInLYaLVHKIHHRYKTPAAVCATYAHP 177
                 6789***************66666999666**************999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 831.68
//
Query:       MMETSP1325-20131115|6066_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.3   0.1      0.057   12.5   0.0    1.3  1  PF03924.8 CHASE domain
      0.087   12.4   0.1       0.24   11.0   0.0    1.8  1  PF13855.1 Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF03924.8  CHASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   8.4e-06     0.057      37     117 ..     190     286 ..     175     292 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 8.4e-06
   PF03924.8  37 aaeraafeaelraeggpdfaik.peg...........erdeyfpityiePlagneralGlDmaseperrealer....ardtgepvlsgpveLvqeg 117
                 aa+ +++++ lr++ ++++++   e            +  +   i ++e l++ne a +lD+ ++ +  +a+++    a+++g++ + + ++L  +g
  MMETSP1325-20131115|6066_1 190 AAKAEEYVEGLRRKHRHERHVAaLEDatlvtvslsycDLRPADMIELVEALKKNEVATSLDLNANTHVDDAALQplllALANGAMPALEVLNLQGTG 286
                 567799999************755334799999********************************99999988877778888888777777776655 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.6e-05      0.24       5      51 ..     248     301 ..     244     303 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.6e-05
   PF13855.1   5 eLdLsnNrlkvipdgaFkgl.........snLkvLdLsgnnlksispeafkgLpsL 51 
                 +LdL+ N  ++++d a++ l         + L+vL+L+g+  ++is+++ kgL   
  MMETSP1325-20131115|6066_1 248 SLDLNAN--THVDDAALQPLllalangamPALEVLNLQGTGASVISRNMCKGLAMM 301
                 5666666..66666666666666666666***********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      406  (0.0296957); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.42s 00:00:01.06 Elapsed: 00:00:00.62
# Mc/sec: 1202.04
//
Query:       MMETSP1325-20131115|6068_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 235.28
//
Query:       MMETSP1325-20131115|6069_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-11   41.2   0.0    1.1e-06   27.3   0.0    3.4  3  PF00036.27 EF hand
    6.8e-08   31.6   0.1    0.00024   20.5   0.1    3.1  2  PF13405.1  EF-hand domain
      7e-08   32.3   0.1    0.00019   21.3   0.0    2.9  2  PF13499.1  EF-hand domain pair
    8.8e-08   31.0   0.3    0.00042   19.4   0.0    3.4  4  PF13202.1  EF hand
    1.4e-05   24.4   3.8      0.012   15.1   0.0    4.3  4  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00013      0.37      12      27 ..       1      16 [.       1      18 [. 0.90
   2 !   27.3   0.0   4.2e-10   1.1e-06       4      28 ..     141     165 ..     138     166 .. 0.90
   3 ?   -2.3   0.0       1.2   3.2e+03      16      26 ..     209     219 ..     197     221 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00013
                TTSSEBEHHHHHHHHH CS
  PF00036.27 12 DgdGkIsfeEfkealk 27
                DgdG Is+ Ef ++++
  MMETSP1325-20131115|6069_1  1 DGDGLISLAEFTAWYT 16
                9**********99876 PP

  == domain 2    score: 27.3 bits;  conditional E-value: 4.2e-10
                 HHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkealkk 28 
                  aF ++D+DgdG +sfeE++e+l++
  MMETSP1325-20131115|6069_1 141 FAFTIYDVDGDGLVSFEELVEYLAS 165
                 69*******************9986 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 1.2
                 EBEHHHHHHHH CS
  PF00036.27  16 kIsfeEfkeal 26 
                 +I + Ef +++
  MMETSP1325-20131115|6069_1 209 RIGKAEFSSFV 219
                 57788888776 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0011       3.1      12      29 ..       1      17 [.       1      20 [. 0.88
   2 !   20.5   0.1   8.9e-08   0.00024       5      27 ..     142     164 ..     138     183 .. 0.92

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0011
                -----B---HHHHHHH.H CS
   PF13405.1 12 dgdGkidaeELrdaLrks 29
                dgdG i+++E+ ++++ s
  MMETSP1325-20131115|6069_1  1 DGDGLISLAEFTAWYT-S 17
                8***********9987.4 PP

  == domain 2    score: 20.5 bits;  conditional E-value: 8.9e-08
                 --GCC-------B---HHHHHHH CS
   PF13405.1   5 aFklfDkdgdGkidaeELrdaLr 27 
                 aF+++D dgdG +++eEL+  L 
  MMETSP1325-20131115|6069_1 142 AFTIYDVDGDGLVSFEELVEYLA 164
                 8*****************99875 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00074         2      12      31 ..       1      20 [.       1      64 [. 0.77
   2 !   21.3   0.0     7e-08   0.00019       5      64 ..     142     217 ..      68     219 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00074
   PF13499.1 12 dgdgyldkeeLlrllkhlgs 31
                dgdg ++ +e++++ + +gs
  MMETSP1325-20131115|6069_1  1 DGDGLISLAEFTAWYTSAGS 20
                56666666666666666665 PP

  == domain 2    score: 21.3 bits;  conditional E-value: 7e-08
   PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgsels................deevrevldyifkelDkngdGvlsfeEflq 64 
                 aF  +D+dgdg ++ eeL+++l      l+                de     + + f+e+ +n   ++  +Ef +
  MMETSP1325-20131115|6069_1 142 AFTIYDVDGDGLVSFEELVEYLASVFKVLFvtspelrsqmdldmspDELAHSTASQAFAEAGLNLRTRIGKAEFSS 217
                 5888888888888888888888777755557777777777776665555555777777777777777777777766 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0   0.00064       1.8      11      22 ..       1      12 [.       1      15 [. 0.92
   2 !   19.4   0.0   1.5e-07   0.00042       4      23 ..     142     161 ..     139     164 .. 0.87
   3 ?   -3.8   0.0       3.2   8.7e+03       7      11 ..     180     184 ..     179     185 .. 0.77
   4 ?   -2.8   0.0       1.6   4.4e+03      16      25 .]     210     219 ..     209     219 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00064
                S----B-HHHHH CS
   PF13202.1 11 NgDGkIsreELk 22
                +gDG Is  E+ 
  MMETSP1325-20131115|6069_1  1 DGDGLISLAEFT 12
                9*********96 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 1.5e-07
                 HHHHH--S----B-HHHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELkr 23 
                 +F  +D++gDG +s+eEL +
  MMETSP1325-20131115|6069_1 142 AFTIYDVDGDGLVSFEELVE 161
                 5999**************76 PP

  == domain 3    score: -3.8 bits;  conditional E-value: 3.2
                 HH--S CS
   PF13202.1   7 afDlN 11 
                 ++Dl+
  MMETSP1325-20131115|6069_1 180 QMDLD 184
                 89998 PP

  == domain 4    score: -2.8 bits;  conditional E-value: 1.6
                 B-HHHHHHHH CS
   PF13202.1  16 IsreELkrlv 25 
                 I + E++ +v
  MMETSP1325-20131115|6069_1 210 IGKAEFSSFV 219
                 6689999875 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0023       6.2      37      48 ..       1      12 [.       1      16 [. 0.92
   2 ?    0.2   0.2      0.18     5e+02       7      24 ..      72      91 ..      66     115 .. 0.57
   3 !   15.1   0.0   4.2e-06     0.012      27      52 ..     139     164 ..     118     165 .. 0.86
   4 ?   -0.3   0.0      0.27   7.4e+02      41      50 ..     209     218 ..     172     222 .. 0.58

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0023
   PF13833.1 37 dgdGkisfeEFc 48
                dgdG is++EF 
  MMETSP1325-20131115|6069_1  1 DGDGLISLAEFT 12
                9**********7 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.18
   PF13833.1  7 reeLkral.allglkg.lse 24
                + +++ a+ +l++l+g l+e
  MMETSP1325-20131115|6069_1 72 KTAFMQAMlNLIRLGGnLTE 91
                56777777666677766332 PP

  == domain 3    score: 15.1 bits;  conditional E-value: 4.2e-06
   PF13833.1  27 vdilfrefDtdgdGkisfeEFcvlle 52 
                 v   f   D dgdG +sfeE +++l+
  MMETSP1325-20131115|6069_1 139 VSFAFTIYDVDGDGLVSFEELVEYLA 164
                 56668889**************9986 PP

  == domain 4    score: -0.3 bits;  conditional E-value: 0.27
   PF13833.1  41 kisfeEFcvl 50 
                 +i+++EF ++
  MMETSP1325-20131115|6069_1 209 RIGKAEFSSF 218
                 4666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 1017.32
//
Query:       MMETSP1325-20131115|6071_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.41s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|6072_1  [L=281]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   21.8   5.2     0.0011   18.8   3.6    2.2  1  PF02135.11 TAZ zinc finger


Domain annotation for each model (and alignments):
>> PF02135.11  TAZ zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   3.6   7.8e-08    0.0011       3      69 ..     169     238 ..     167     255 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 7.8e-08
  PF02135.11   3 lqeqlelLlHakkCkkreeakCklkaCkklkkllkHl...ksCkkkk.ckvgr..CasskqlikHakeCkdse 69 
                 +  q+ +L Ha+ C++r    Ck++ C + ++ l+ +   + C + +    ++    + k+l++H +eC++++
  MMETSP1325-20131115|6072_1 169 VAYQIAMLKHARACRDR---DCKVPGCVTTRAFLSRVlssQACPTASiTAKQGiaFDKVKRLLSHERECRQKR 238
                 667899**********5...5***********99986333679888843333311457899999*****9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1374.24
//
Query:       MMETSP1325-20131115|6073_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.091   13.3   0.9       0.13   12.8   0.6    1.2  1  PF02957.10 TT viral ORF2


Domain annotation for each model (and alignments):
>> PF02957.10  TT viral ORF2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.6   9.7e-06      0.13      35     114 ..      44     126 ..      37     129 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 9.7e-06
  PF02957.10  35 Hlidlatqlslee...pqgkrpkrklilrqspalp....aakeekkklakwlettgedaetgpseegdgttgdaededldegdlDeL 114
                 H  ++a + ++ e   +  ++p++++++ qs        + k++  ++++  + tg  ++tg++e++++  ++++d    +gd++ +
  MMETSP1325-20131115|6073_1  44 HAAHRAHEGQRDEpltTVKPNPQPTSPVAQSATSSfvrvFGKKVEDDEREYST-TGGGGGTGGEEDTEAGSSEEVD---SDGDMESM 126
                 77888888888888886666666666666666655111146788888888885.5556666666666666666665...56666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 702.93
//
Query:       MMETSP1325-20131115|6074_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-06   28.0   6.9    2.3e-06   28.0   4.8    1.6  2  PF04749.12 PLAC8 family


Domain annotation for each model (and alignments):
>> PF04749.12  PLAC8 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   4.8   1.7e-10   2.3e-06      24     105 ..      55     134 ..      40     135 .. 0.76
   2 ?   -3.1   0.0      0.76     1e+04      44      50 ..     205     211 ..     186     223 .. 0.48

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 1.7e-10
  PF04749.12  24 vlfgknaerlgngsksehsalgscllaflllglla..ll.allll.ysallRtkiRekyniegsacdDclvhlfcppcalcQesre 105
                  +fg++a++  + s       + c++ +l++g +a  ++ +  ++ + + +R+++ +kynie+++c  +l++++cp  +++Q++ e
  MMETSP1325-20131115|6074_1  55 XVFGRVAQVGADYS------SCPCCCVGLMVGAAAggYFfGAPVFpCVMQVRRRLVTKYNIEETWCCSLLHVVCCPGVSIAQMAME 134
                 56777777776544......3455555555555556744466555588***********************************988 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 0.76
  PF04749.12  44 lgsclla 50 
                 + sc+ +
  MMETSP1325-20131115|6074_1 205 FRSCASW 211
                 3333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.63
# Mc/sec: 950.94
//
Query:       MMETSP1325-20131115|6075_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       671  (0.0490784); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|6076_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-13   47.9   0.0    8.1e-13   47.9   0.0    1.0  1  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   5.9e-17   8.1e-13     191     242 ..      48      98 ..       5      99 .] 0.82

  Alignments for each domain:
  == domain 1    score: 47.9 bits;  conditional E-value: 5.9e-17
  PF01504.13 191 iesedekevlylgiIDiLqeYtlkKkleslvksllklkgkdisvvsPkeYak 242
                   ++ + e++y+giIDiLq Yt kK+le+ +k + ++++ +is+++P++Ya+
  MMETSP1325-20131115|6076_1  48 RIENGKYELYYFGIIDILQVYTHKKRLEHHAKGV-YVDKTTISACPPDMYAA 98 
                 33333789**************************.9999***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|6079_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 429.54
//
Query:       MMETSP1325-20131115|6080_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 572.19
//
Query:       MMETSP1325-20131115|6077_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1223.40
//
Query:       MMETSP1325-20131115|6081_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-07   29.0   0.6    9.6e-07   28.3   0.0    1.6  2  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.3      0.59     8e+03      11      20 ..      43      52 ..      36      56 .. 0.45
   2 !   28.3   0.0   7.1e-11   9.6e-07      13      75 ..     141     227 ..     135     236 .. 0.93

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.59
                ----HHHCCH CS
  PF00153.22 11 aGaiAgaiaa 20
                a+ +A a+aa
  MMETSP1325-20131115|6081_1 43 AATAAVAAAA 52
                3333333322 PP

  == domain 2    score: 28.3 bits;  conditional E-value: 7.1e-11
                 --HHHCCHHHCHHHHHHHHHHH........................-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHH CS
  PF00153.22  13 aiAgaiaalvttPldvvKtrlq........................ksaasasskykgildalkkiykeeGirglyrGllpnllrvv 75 
                 ++A+a+ +++ttP+ v++tr+                         + ++s + k +g+l+ l+++  +eG  +l+ G+ p+ll + 
  MMETSP1325-20131115|6081_1 141 IVAAALCSIATTPFAVARTRILlatdlgpspssyardggtiarrrrRRRRSPQPKTQGVLEFLRELQASEGRAALFAGWKPRLLYNG 227
                 5899999**************************************99999999999**************************99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       520  (0.0380339); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1222.14
//
Query:       MMETSP1325-20131115|6082_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 694.45
//
Query:       MMETSP1325-20131115|6083_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   14.7   1.7      0.029   13.5   0.9    1.7  2  PF14011.1 EspG family
       0.12   11.9   0.0         11    5.6   0.0    2.2  2  PF09465.5 Lamin-B receptor of TUDOR domain


Domain annotation for each model (and alignments):
>> PF14011.1  EspG family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.12   8.3e+02     203     219 ..      12      28 ..       8      32 .. 0.80
   2 ?   13.5   0.9   4.2e-06     0.029     143     220 ..      53     134 ..      43     148 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.12
   PF14011.1 203 vswfDtpqGRylvtprr 219
                  + fD + GRy v+  +
  MMETSP1325-20131115|6083_1  12 AAMFDPENGRYTVELVD 28 
                 6789*******998665 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 4.2e-06
   PF14011.1 143 laeale..agrsaaklasalrraglpaddarvvaaalsrprtrvgqvaasrrdgr..rarassavswfDtpqGRylvtprrg 220
                  a+a++  + +++a++ +  +r+g   ++a++ +  +  p+ rvg +++ ++ +r      s  v+ fD p+GR+lv+  +g
  MMETSP1325-20131115|6083_1  53 AAAARGagDSGGGASVCEDGSRGGDGGAAAEQDEVSAPLPPVRVGRTMVISGTKRedLNGQSCHVTTFDEPSGRWLVELADG 134
                 233333458888999999999998888888888889999*************888799999***************987665 PP

>> PF09465.5  Lamin-B receptor of TUDOR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0048        33      30      50 ..      15      35 ..      11      39 .. 0.88
   2 ?    5.6   0.0    0.0016        11      26      49 ..     116     139 ..     113     148 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0048
   PF09465.5 30 fdsksqlYtviYkDGteLeLk 50
                fd ++  Ytv   DG  ++Lk
  MMETSP1325-20131115|6083_1 15 FDPENGRYTVELVDGSMIKLK 35
                8999999***********999 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0016
   PF09465.5  26 kvlsfdsksqlYtviYkDGteLeL 49 
                 +v++fd+ s  + v   DGt L+L
  MMETSP1325-20131115|6083_1 116 HVTTFDEPSGRWLVELADGTMLKL 139
                 799******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 911.56
//
Query:       MMETSP1325-20131115|6084_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   13.3   2.8      0.084   12.8   2.0    1.2  1  PF13984.1 MsyB protein
        1.4    9.4   6.0        1.4    9.4   2.5    1.9  2  PF09538.5 Protein of unknown function (FYDLN_acid)


Domain annotation for each model (and alignments):
>> PF13984.1  MsyB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.0   1.2e-05     0.084       8      76 ..       8      81 ..       3      86 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.2e-05
   PF13984.1  8 aid.aareeflaeepeldedeaavsqlnlqkyvlqdGdilwqaeffedege.....egeclalrsgeaaqaifdg 76
                a + aar++ +++e e  + ea+ + ++ q  v+ dG+     ef  dege     ++++ ++ s++a+ a++d+
  MMETSP1325-20131115|6084_1  8 AEEaAARQAAIEAE-EAAAAEAEAEAVAQQTQVVADGEDELLGEFLVDEGEadvggDADTAPIASSAASGALLDS 81
                44415677777665.777788889999*******************99986333335789999999999999985 PP

>> PF09538.5  Protein of unknown function (FYDLN_acid)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.5   0.00021       1.4      39     100 ..       9      66 ..       2      74 .. 0.51
   2 ?    0.3   0.0      0.14   9.3e+02      21      42 ..      97     118 ..      89     126 .] 0.70

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00021
   PF09538.5  39 ekeakkkavaadeeeeaaeekeeeeeeeeddvledddeeedldddledeadd.dvdldeddDd 100
                 e ea ++++a ++ee+aa+e+e+e+ +++++v+ d ++e    + l d   + ++d++ d+D+
  MMETSP1325-20131115|6084_1   9 E-EAAARQAAIEAEEAAAAEAEAEAVAQQTQVVADGEDELL-GEFLVD---EgEADVGGDADT 66 
                 3.334444444444444455555555555555555555433.333333...235688888887 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.14
   PF09538.5  21 DLnkdPivcpkcgeevepekea 42 
                 DLn +P+ +    ++ + ++++
  MMETSP1325-20131115|6084_1  97 DLNATPVPSSSAATTATASNPT 118
                 8999999887777776666333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       890  (0.0650965); expected 273.4 (0.02)
Passed bias filter:                      471  (0.03445); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.66
# Mc/sec: 457.49
//
Query:       MMETSP1325-20131115|6085_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 483.55
//
Query:       MMETSP1325-20131115|6087_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-07   28.4   1.7    1.4e-06   27.7   0.4    1.8  2  PF07885.11 Ion channel
    7.6e-05   21.9   0.1    9.3e-05   21.6   0.1    1.0  1  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF07885.11  Ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.11   7.4e+02      53      61 ..      21      29 ..       8      54 .. 0.66
   2 !   27.7   0.4   2.1e-10   1.4e-06      23      58 ..      69     105 ..      55     106 .] 0.87

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.11
  PF07885.11 53 lfaivyill 61
                lfa+++ l+
  MMETSP1325-20131115|6087_1 21 LFACAFYLT 29
                333333333 PP

  == domain 2    score: 27.7 bits;  conditional E-value: 2.1e-10
  PF07885.11  23 wsfldalYfsfvtltTiGYGdivPg.tdagrlfaivy 58 
                   +l+a+Y+++ tltT+GYG ++ +  ++g ++ +++
  MMETSP1325-20131115|6087_1  69 TKYLQAFYWALYTLTTTGYGSVSYTvPTIGSWLLWLW 105
                 5799******************988888888888877 PP

>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.1   1.4e-08   9.3e-05      94     170 ..       6      96 ..       3     105 .. 0.90

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.4e-08
                 XXXXXXXXXXXXXXXXX-----S-SSSS-----TTT..............-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX... CS
  PF00520.26  94 kallnvlllllfvlfifaiigvqlfggklrkkcvke..............kagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatlr 170
                 ++l+ ++ +l+++ + fa+ +++   ++  k  + +              +++  p+ +    +++ +af++++ ++t+ g+g + y++ +
  MMETSP1325-20131115|6087_1   6 RRLVFFVPILVLMNHLFACAFYLTGTYSDGKGVDTWlgskitvpaeddgeDEEVLPVADAPVQTKYLQAFYWALYTLTTTGYGSVSYTVPT 96 
                 6788999999******************99999999*************99999*******************************998644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.61
# Mc/sec: 416.42
//
Query:       MMETSP1325-20131115|6088_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.35s 00:00:00.63 Elapsed: 00:00:00.52
# Mc/sec: 156.68
//
Query:       MMETSP1325-20131115|6089_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-26   93.0   0.0      2e-26   92.6   0.0    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
      4e-08   32.9   0.0    4.8e-08   32.6   0.0    1.0  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.6   0.0   2.9e-30     2e-26     146     271 ..      23     185 ..      11     186 .. 0.92

  Alignments for each domain:
  == domain 1    score: 92.6 bits;  conditional E-value: 2.9e-30
                 EEEEETTCEEE.....EEEECCB-SEEEEEEE-E...EEETTTTEEEE-----B--SE.EE-GGGBSCHHH--BTTSSCEEEEEEEEEE---TT---EEEEEESS-TT-................................EEEEETTEEEEE-HHHHTTCEEEEEE CS
                 xxxxxxxxxxx.....xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00443.24 146 srlkclecknv.....kvklkrlPeiLiihlkRf...kyseerssnkKlnekvefple.LdlssyvneekkeeseskpkkYeLvavvvHsGslssGHYvayvknneknk................................WlkfdDetvtevkeeevlkesaYvlf 271
                 ++++c +ck+       +++++  +++ii+lkRf   k  + r +++Kl+e+vefpl  Ld+ +y++++ +++ ++++++Y+L++vv+H+G +s GHY+a +++    +                                W ++dD++v+++++e v+++ aY+ f
  MMETSP1325-20131115|6089_1  23 NTYYCGKCKEHvrgtkVLGVWKPADVMIIQLKRFgmqK-YYGRHMPEKLTETVEFPLDgLDIGPYIADQAAAKAQPDKYIYDLFGVVNHIGHASFGHYTASIRKG---EwinnwaccdpgdpkeaaktaseglgkppaaclWEEYDDHRVRDIDAEAVVSKRAYIXF 185
                 789999999999999899****************8842.4567789*********************************************************33...2335888999***********************************************88 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0     7e-12   4.8e-08     163     295 .]       4     168 ..       2     168 .. 0.79

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 7e-12
   PF13423.1 163 iklenileeslnseknke...ikcesckkkssaevakkftslPpiLgIclkrynek....efgakrlntkvdiple.lrlphfiqddeqenekplsgefkyeLqavVchigdsltsghlvSlirvae.sek.........sq.................WylFnDfrv 295
                 i+le+++e + ++   +      c +ck++   +    + +  +++ I+lkr +++    +  + +l ++v++pl+ l+++  i+d+   +   +  +++y L +vV hig   + gh+ + ir+ e  ++         ++                 W  ++D rv
  MMETSP1325-20131115|6089_1   4 ITLEQCFELYTKKTILDGdntYYCGKCKEHVRGTKVLGVWKPADVMIIQLKRFGMQkyygRHMPEKLTETVEFPLDgLDIGPYIADQAAAKA--QPDKYIYDLFGVVNHIGH-ASFGHYTASIRKGEwINNwaccdpgdpKEaaktaseglgkppaaclWEEYDDHRV 168
                 6788888888886655556669999***999999999999999*************87766669********************99987666..999***************.99**********9753334555555541144455556666667777888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.33s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1213.47
//
Query:       MMETSP1325-20131115|6092_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|6086_1  [L=472]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-10   39.4   5.3    6.9e-10   38.4   3.7    1.5  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    6.8e-09   35.2  11.4    1.3e-08   34.2   7.9    1.5  1  PF13639.1  Ring finger domain
    1.2e-06   27.9   7.7    1.2e-06   27.9   5.3    1.7  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    1.3e-06   27.8   8.6    1.3e-06   27.8   6.0    1.8  2  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    9.2e-05   21.8   5.8    0.00027   20.3   4.0    1.8  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    0.00021   21.2   3.4     0.0005   20.0   2.4    1.6  1  PF12678.2  RING-H2 zinc finger
  ------ inclusion threshold ------
       0.02   14.6   4.2       0.02   14.6   2.9    1.9  2  PF01485.16 IBR domain
       0.17   11.8   2.8       0.47   10.4   2.0    1.8  1  PF10886.3  Protein of unknown function (DUF2685)
        2.6    7.7   8.8        7.8    6.2   6.1    1.8  1  PF07191.7  Protein of unknown function (DUF1407)


Domain annotation for each model (and alignments):
>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   3.7   4.6e-13   6.9e-10       3      45 ..     259     303 ..     257     304 .. 0.89

  Alignments for each domain:
  == domain 1    score: 38.4 bits;  conditional E-value: 4.6e-13
   PF13923.1   3 fsCpiCleelen....pviltpCgHlyCkkCieqwlekskkkCPiCr 45 
                 + CpiC+e +       v++tpCgH +C +C+++w +     CP Cr
  MMETSP1325-20131115|6086_1 259 DLCPICQEPMHPdqpdGVVTTPCGHTFCGPCAQRWTSD--LACPNCR 303
                 68******996667888899***************887..9*****9 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   7.9   8.8e-12   1.3e-08       2      44 ..     260     303 ..     259     305 .. 0.92

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 8.8e-12
   PF13639.1   2 eCaiCldelse..geevvrlpCgHvfHeeCldewlrssnsCPlCr 44 
                  C+iC++++     + vv++pCgH+f+  C ++w +    CP+Cr
  MMETSP1325-20131115|6086_1 260 LCPICQEPMHPdqPDGVVTTPCGHTFCGPCAQRWTS-DLACPNCR 303
                 5********77889********************75.88*****9 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   5.3   8.1e-10   1.2e-06       1      41 []     261     302 ..     261     302 .. 0.96
   2 ?   -3.6   0.1       5.4   8.2e+03      22      28 ..     322     328 ..     321     332 .. 0.59

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 8.1e-10
                 -TTTSSS-SSEE.....BSCTS-EE-CHHHHHHHCST-----TTT CS
  PF00097.20   1 CpiCleeakepn....elleCkHsfCskCirkilksrkkvkCPlC 41 
                 CpiC+e +   +     +++C+H+fC +C +++++      CP+C
  MMETSP1325-20131115|6086_1 261 CPICQEPMHPDQpdgvVTTPCGHTFCGPCAQRWTS---DLACPNC 302
                 *******9998899*********************...899**** PP

  == domain 2    score: -3.6 bits;  conditional E-value: 5.4
                 -CHHHHH CS
  PF00097.20  22 CskCirk 28 
                 C +C +k
  MMETSP1325-20131115|6086_1 322 CIACATK 328
                 5555544 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   6.0   8.6e-10   1.3e-06       3      45 ..     259     304 ..     257     308 .. 0.88
   2 ?   -2.5   0.1       2.4   3.7e+03       5      45 ..     322     327 ..     319     331 .. 0.49

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 8.6e-10
   PF13920.1   3 ktCvvCle.....readvlllpCgHlclCeeCaerllkrkkkCpiCrs 45 
                 + C++C+e     ++  v+ +pCgH  +C  Ca+r+  ++  Cp Cr 
  MMETSP1325-20131115|6086_1 259 DLCPICQEpmhpdQPDGVVTTPCGHT-FCGPCAQRW-TSDLACPNCRG 304
                 68******766655778*********.*********.79*******96 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.4
   PF13920.1   5 CvvClereadvlllpCgHlclCeeCaerllkrkkkCpiCrs 45 
                 C+ C                                    +
  MMETSP1325-20131115|6086_1 322 CIAC-----------------------------------AT 327
                 4433...................................33 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   4.0   1.8e-07   0.00027      12      57 ..     260     300 ..     258     307 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.8e-07
                 B-TTT-S.-SS....EEEES.---EEEHHHHHHHHHHHHTTT--B--- CS
   PF13445.1  12 aCpiske.qsteqnpPvvLp.CGhvisrealeklakggrsnkgrfkCP 57 
                  Cpi++e +  +q + vv + CGh+++  + +++++        + CP
  MMETSP1325-20131115|6086_1 260 LCPICQEpMHPDQPDGVVTTpCGHTFCGPCAQRWTS-------DLACP 300
                 5********999999998666*************98.......67777 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   2.4   3.3e-07    0.0005      16      75 .]     255     303 ..     241     303 .. 0.70

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 3.3e-07
   PF12678.2  16 disednCaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrktCPlcr 75 
                 +  ed C iC++++         p+  +   v+   CgH F   C ++W  +   CP cr
  MMETSP1325-20131115|6086_1 255 EWGEDLCPICQEPM--------HPD--QPDGVVTTPCGHTFCGPCAQRWT-SDLACPNCR 303
                 33577888888888........222..223567778*************8.4568**998 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   2.9   1.3e-05      0.02      19      64 .]     259     299 ..     236     302 .. 0.82
   2 ?   -0.9   0.7      0.92   1.4e+03      21      46 ..     299     325 ..     295     329 .. 0.61

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.3e-05
  PF01485.16  19 kwCprpdCeaiiekekgakkssvtCskCgfefCflCkkewHeglsC 64 
                   Cp   C++++ +++ +    vt + Cg+ fC  C ++w ++l C
  MMETSP1325-20131115|6086_1 259 DLCPI--CQEPMHPDQPDGV--VTTP-CGHTFCGPCAQRWTSDLAC 299
                 48977..***********99..**99.*************998887 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.92
  PF01485.16  21 CprpdCeaiiekekgakks...svtCskC 46 
                 Cp+  C   + ++ g         +C  C
  MMETSP1325-20131115|6086_1 299 CPN--CRGCMAHDRGFRSDgagPTNCIAC 325
                 765..888777777666555554555555 PP

>> PF10886.3  Protein of unknown function (DUF2685)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.0   0.00031      0.47       3      31 ..     260     291 ..     258     297 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00031
   PF10886.3   3 iCvvCKqPveka...lavdTekGpvhpGpCaq 31 
                 +C++C +P++      +v T+ G +  GpCaq
  MMETSP1325-20131115|6086_1 260 LCPICQEPMHPDqpdGVVTTPCGHTFCGPCAQ 291
                 7********8543457899************9 PP

>> PF07191.7  Protein of unknown function (DUF1407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.1    0.0052       7.8       3      40 ..     260     306 ..     258     325 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0052
   PF07191.7   3 kCPkCqseleskg.........eeahCeaCqkdfkkealCpdCeqeL 40 
                  CP Cq+ ++ ++         ++++C  C ++ +    Cp+C+  +
  MMETSP1325-20131115|6086_1 260 LCPICQEPMHPDQpdgvvttpcGHTFCGPCAQRWTSDLACPNCRGCM 306
                 6********998877888888889*******************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       944  (0.0690462); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.90u 0.39s 00:00:01.29 Elapsed: 00:00:00.68
# Mc/sec: 1663.35
//
Query:       MMETSP1325-20131115|6093_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-20   72.7   2.6    1.3e-20   72.7   1.8    1.8  2  PF05739.14 SNARE domain
    0.00014   21.4   0.6    0.00016   21.1   0.4    1.0  1  PF00015.16 Methyl-accepting chemotaxis protein (MCP) signalling domain
  ------ inclusion threshold ------
      0.038   13.1   2.0      0.044   12.9   1.4    1.2  1  PF11932.3  Protein of unknown function (DUF3450)
      0.048   13.7   0.5      0.062   13.3   0.3    1.3  1  PF00601.14 Influenza non-structural protein (NS2)
       0.24    9.4   2.0       0.27    9.2   1.4    1.0  1  PF00509.13 Haemagglutinin
       0.29   11.3   4.8        1.8    8.8   1.6    2.1  2  PF04102.7  SlyX


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.6      0.38   8.7e+02      29      40 ..       6      17 ..       5      19 .. 0.75
   2 !   72.7   1.8   5.7e-24   1.3e-20       1      63 []      20      82 ..      20      82 .. 0.99

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.38
                HHHHHHHHHHHH CS
  PF05739.14 29 eQgelldrIdnn 40
                +Q +++d++++ 
  MMETSP1325-20131115|6093_1  6 QQLQVVDNMEEL 17
                688899999875 PP

  == domain 2    score: 72.7 bits;  conditional E-value: 5.7e-24
                HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF05739.14  1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalryqk 63
                erdee++++ +si eL q+f++++++v +Qg++ldrId n+e++++r++++  +l ka++yqk
  MMETSP1325-20131115|6093_1 20 ERDEEITRIAKSIEELSQIFKELAVLVIDQGTILDRIDFNMEQVVERTQEGLVQLGKAEKYQK 82
                8*************************************************************8 PP

>> PF00015.16  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.4     7e-08   0.00016     118     183 ..       6      71 ..       2      83 .. 0.89

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 7e-08
                 .....-----HHHHH---CCCCHHHHCCCHHHH---HHHHHHHHH--------HHHHHHHHHHHHH CS
  PF00015.16 118 evrteveegselveetgealkeIveavaeiadlvqeiaaaseeqsasieevnqaveeidevtkena 183
                 +  + v++  elv+e  e++ +I+++++e +++ +e+a+ + +q + ++ +  ++e++ e t+e +
  MMETSP1325-20131115|6093_1   6 QQLQVVDNMEELVNERDEEITRIAKSIEELSQIFKELAVLVIDQGTILDRIDFNMEQVVERTQEGL 71 
                 5557799999*************************************************9999865 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.4   1.9e-05     0.044      42      97 ..       8      63 ..       3      80 .. 0.59

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.9e-05
   PF11932.3 42 qkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieei 97
                 + +d++++  +e  +ei ++ + +e+l+   ++l+ lv +q + l+ ++ ++e++
  MMETSP1325-20131115|6093_1  8 LQVVDNMEELVNERDEEITRIAKSIEELSQIFKELAVLVIDQGTILDRIDFNMEQV 63
                44556666666666666666666666666666666666666666666666666665 PP

>> PF00601.14  Influenza non-structural protein (NS2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   2.7e-05     0.062      31      71 ..      24      64 ..       3      74 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.7e-05
  PF00601.14 31 lrernrkareeLslkfeeirwlieevrtvlkktensfeqiv 71
                   r++k  eeLs+ f+e+  l+    t+l + +  +eq+v
  MMETSP1325-20131115|6093_1 24 EITRIAKSIEELSQIFKELAVLVIDQGTILDRIDFNMEQVV 64
                456999**************************999999997 PP

>> PF00509.13  Haemagglutinin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.4   0.00012      0.27     389     455 ..       5      72 ..       2      79 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00012
                 HHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC.CHCCCHHHHHHHHHHHHHHH CS
  PF00509.13 389 kqfeavekefselekrieelekkvdDsildvwsynaeLlvllenekt.ldleDsevknLyekvrrqLr 455
                 +q  +v ++++el ++ +e   ++  si ++     eL+vl+ ++ t ld  D +++++ e+ ++ L 
  MMETSP1325-20131115|6093_1   5 QQQLQVVDNMEELVNERDEEITRIAKSIEELSQIFKELAVLVIDQGTiLDRIDFNMEQVVERTQEGLV 72 
                 444555667777777777777788888899999999****9888876269***********9998775 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   1.6    0.0008       1.8      16      52 ..       7      43 ..       4      49 .. 0.91
   2 ?    5.2   0.1     0.011        25      22      51 ..      41      70 ..      38      82 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0008
   PF04102.7 16 qedtieeLNevvaeqqkeidrlqrqlrllaerlkele 52
                q ++++ + e v e ++ei+r+++ ++ l++ +kel 
  MMETSP1325-20131115|6093_1  7 QLQVVDNMEELVNERDEEITRIAKSIEELSQIFKELA 43
                7789***************************999975 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.011
   PF04102.7 22 eLNevvaeqqkeidrlqrqlrllaerlkel 51
                eL   v++q   +dr+  ++++++er +e 
  MMETSP1325-20131115|6093_1 41 ELAVLVIDQGTILDRIDFNMEQVVERTQEG 70
                777889********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1034  (0.075629); expected 273.4 (0.02)
Passed bias filter:                      780  (0.0570509); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.48s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|6096_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       584  (0.042715); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.69
# Mc/sec: 441.07
//
Query:       MMETSP1325-20131115|6094_1  [L=368]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-23   81.7   0.2    3.5e-23   81.2   0.1    1.3  1  PF04739.10 5'-AMP-activated protein kinase beta subunit, interation domain


Domain annotation for each model (and alignments):
>> PF04739.10  5'-AMP-activated protein kinase beta subunit, interation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.2   0.1   2.6e-27   3.5e-23      20      96 ..     174     249 ..     141     255 .. 0.82

  Alignments for each domain:
  == domain 1    score: 81.2 bits;  conditional E-value: 2.6e-27
                 SSSS.......ST-----B--GGGSS-CCCSSTTHCSHTTB-----GGGTTB-EEE------EEEEEEEEETTEEEEEE CS
  PF04739.10  20 dyfkekk..akeelkeppqlPphLnkvllnkasssndeasllsipnhVvLnHLlttsikndvlavacttRYkgKfvTqi 96 
                   +   +   +e +kepp lPphL++ +lnk     ++a +lsip+hV LnHL++t ik++++++++t RY++KfvT  
  MMETSP1325-20131115|6094_1 174 FTQV--RpeLEEYTKEPPPLPPHLRHIILNKV-PPVNDAAALSIPQHVALNHLYCTAIKDGMMVLGITQRYREKFVTXY 249
                 2222..23478999*****************6.6688899*************************************74 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.32s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 1695.88
//
Query:       MMETSP1325-20131115|6099_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-06   27.1   0.0      3e-06   26.7   0.0    1.1  1  PF00685.22 Sulfotransferase domain
  ------ inclusion threshold ------
      0.069   12.6   0.0        0.1   12.1   0.0    1.4  1  PF03567.9  Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF00685.22  Sulfotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   4.4e-10     3e-06     100     197 ..      62     192 ..      47     226 .. 0.78

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 4.4e-10
                 HHTT-EEEEEE--HHHHHHHHHHHHHHCT..................................CSTTT---HHHHHHHHH.HHHCCH-.HHHHHHHHHHTCCCCCEEEEEHHHHHH-HHHHHHHHHHHTT--..H CS
  PF00685.22 100 ldknlKiiylvRnpkdvavSryhfsrslk..................................llkepetpfeeffdlflegrvvcgs.yfdhveewlklrkkgnvlflrYEdlkkdpakeikeiaeFlGip..l 197
                  +k+l+ ++++R+p d++ S++++ ++++                                  ++k+pe+   ++    +  ++++gs y++++ ++ +++ +++v++++++ ++++  +++ ++a+ lG++  +
  MMETSP1325-20131115|6099_1  62 QSKQLRFVTILRDPVDRLFSYFVAAKKAGtldltgvdvdfstgdddltfdswaqyqlqragtcMSKNPEQ---DL-WPHCGTEGLFGSlYSKQIASFAEAFSPDQVYVVSFDSYTQNGPRTLSKLADELGLEfeA 192
                 57899*********************99999999999998776666666666666555554443333333...23.33445777777647899**********************************99998551 PP

>> PF03567.9  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.5e-05       0.1      77      97 ..      64      84 ..      35     136 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.5e-05
   PF03567.9 77 dkyfkfifvRdPfeRllSayr 97
                ++ + ++++RdP++Rl S++ 
  MMETSP1325-20131115|6099_1 64 KQLRFVTILRDPVDRLFSYFV 84
                2356899************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.67
# Mc/sec: 869.13
//
Query:       MMETSP1325-20131115|6100_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   14.7   0.0       0.14   12.2   0.0    2.2  2  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     1e-05      0.14       4      23 ..      35      54 ..      33      55 .. 0.91
   2 ?   -1.1   0.0       0.2   2.8e+03       8      22 ..      96     110 ..      91     112 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1e-05
   PF13516.1  4 LtsLdLsnNqigdeGlsaLa 23
                 ++L L ++ + d+G+++La
  MMETSP1325-20131115|6100_1 35 VSTLSLRYCSLKDDGAEMLA 54
                689**************998 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.2
   PF13516.1   8 dLsnNqigdeGlsaL 22 
                  + +  i+ +Gl aL
  MMETSP1325-20131115|6100_1  96 YVCSDTITEKGLTAL 110
                 555556999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 841.27
//
Query:       MMETSP1325-20131115|6101_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 267.83
//
Query:       MMETSP1325-20131115|6098_1  [L=669]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.3e-187  624.2  10.2   1.8e-187  623.8   7.0    1.1  1  PF02990.11 Endomembrane protein 70


Domain annotation for each model (and alignments):
>> PF02990.11  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  623.8   7.0  1.3e-191  1.8e-187      21     513 ..       2     531 ..       1     539 [. 0.93

  Alignments for each domain:
  == domain 1    score: 623.8 bits;  conditional E-value: 1.3e-191
  PF02990.11  21 sesLgevlrgdrivespyklkfleekecevlckkkltkeevkllkkaikeeyvvqwliddlpvatkvekveekkvgfesgfslgkk..deekiylfnhldleieyhaednddnrivevevkprsvkes..................scsla........eespqelkedeeel..eltftYsVkwkesevkwasRwdkylka..eedaqihwfsiinslvivlfLsglvavillRtlkkdlaryneedeee...dkqeesgwklvhgDvfreprk.skllsilvgsGvqllllvlvvlvlallgflspssrgslltaaillyvllgivagYvsarlyktlkgkkwkrnliltaillpgivfvilfvlNlvlwaksssgavPfstlvvllllwflvsvPLsllGgivgfrkeale.eapvrtnqiprqiPeqkwylktllsillaGilpfgaifielffifsslWlekiYylfGflflvfiiLvvvtaevsivltYfqLcaEdyrWwWrsflvsgstavYvflysiyyfvt 513
                 +e+Lge l+gdri +spy+l +++++ c+vlc++k tk+ev+ +kk i+e+y ++w+id+lp+a  + ++e  +++++ gf++g     +++++++nh++++++yh+ + d+nr+v++ v+p sv+++                  +c+++        +++++ ++   + +  ++ ftY+V w+ sev+wasRwd yl+       ++hwfsi+nsl+ivlfL+g+v +il+R l++d++ryn+  +ee   +++eesgwklvh+Dvfr+p + +++++++vg+ +ql+ +++v++++a++gflsp++rgsl+ a++llyv++g  agY sa+lykt++gk+w+++++lta+l+pg++f++++ +Nl lw+++ssgavPf ++v+l++lwf++svPL++lG+++gfrk  +e  +  r++++pr iP+q+wyl   ++++++Gilpfga f+elffi+ss+W+ + Yy+fGfl+lvfiiL +++aev++vl YfqLcaEdy+WwWrsfl+sgsta+Yvf+ys +yf+ 
  MMETSP1325-20131115|6098_1   2   531
                 69***************************************************************99999999*********99874356789**************************************************997466666777778755555555443333469************************976655689************************************8544443348999***************9648****************************************************************************************************************************************66555699*********************************************************************************************************9764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (669 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       897  (0.0656085); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.17u 0.37s 00:00:01.54 Elapsed: 00:00:00.75
# Mc/sec: 2137.55
//
Query:       MMETSP1325-20131115|6103_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.59
# Mc/sec: 158.40
//
Query:       MMETSP1325-20131115|6104_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   12.7   0.0      0.099   12.2   0.0    1.3  1  PF13946.1 Domain of unknown function (DUF4214)


Domain annotation for each model (and alignments):
>> PF13946.1  Domain of unknown function (DUF4214)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   7.3e-06     0.099      35      69 ..      10      44 ..       6      49 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 7.3e-06
   PF13946.1 35 RdaDaaGlaywagqLanGaetreevllgfseStEn 69
                R    +Gl++w  qL++ a + ee++ g+s+ +E 
  MMETSP1325-20131115|6104_1 10 RFVQDHGLQAWLSQLKEIADDAEELAEGLSDEAEL 44
                556679***********************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 433.19
//
Query:       MMETSP1325-20131115|6105_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.62
# Mc/sec: 197.12
//
Query:       MMETSP1325-20131115|6106_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 633.32
//
Query:       MMETSP1325-20131115|6107_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 326.78
//
Query:       MMETSP1325-20131115|6108_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-13   48.2   0.0    4.4e-07   29.4   0.0    2.1  2  PF00139.14 Legume lectin domain


Domain annotation for each model (and alignments):
>> PF00139.14  Legume lectin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   3.2e-11   4.4e-07      78     178 ..       9     104 ..       3     108 .. 0.84
   2 !   17.0   0.0     2e-07    0.0027     183     237 .]     146     200 ..     138     200 .. 0.81

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 3.2e-11
                 TSS-----EEEEEETT.S.---.---------TTTTTGGG---EEEE-B-S-.GGGTTT--SEE--EESSSS-SS-........EE--HHC..TSEEEEEEEEE CS
  PF00139.14  78 seeggdGlaFvlapsk.elpkassggyLGlfnssnngnssnhvvaVEfDtvknkelndiddnhvGidvnsikSvasesagyysfkelklks..gkpiqvwidYd 178
                 + +ggdGla v+++++ +  +a  g  LG +          + +aVEfDt+ n el +  +nhv++   + +  +s++ ++  + ++++++   ++++++i Y+
  MMETSP1325-20131115|6108_1   9 RARGGDGLALVVQSQSpRALGA-GGAGLGYTG-------IANSIAVEFDTYYNAELLEPYENHVAVHTRGWRHPNSANQSFALASSVNVRDlgRDEHTARIVYK 104
                 5689**********99654555.666677655.......5667*********************************9999998888888887799999999997 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 2e-07
                 EEEEEEEETTT.TTEEEEEEE--HHHHS-S...EEE---B----.T--EEEEEEEEEEE CS
  PF00139.14 183 rLsVtlayseskpkkpllsasvdLskvlke...kvyvGFsAstG.nateshyvlswsfs 237
                 +L+V++        +pll + ++L  +l+    ++ vGFs+stG  + ++ ++lsw f+
  MMETSP1325-20131115|6108_1 146 QLEVYVDDLG----TPLLITPLNLDGLLELhhgRAWVGFSGSTGhATWQTTDLLSWRFT 200
                 6777777763....79999999999998844449**********666799*******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.61
# Mc/sec: 907.47
//
Query:       MMETSP1325-20131115|6110_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.1e-09   35.6   0.1    2.1e-08   34.4   0.0    1.6  2  PF10152.4 Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   1.5e-12   2.1e-08     111     148 .]      10      47 ..       3      47 .. 0.92
   2 ?   -2.0   0.1      0.25   3.5e+03      78      78 ..      82      82 ..      52     116 .. 0.47

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 1.5e-12
   PF10152.4 111 rkdpryakYfkmlklgVpaeavknKmqaeGldpelldt 148
                 +  p  akYfkm+++ +p   v  Km+aeG+dp++ld+
  MMETSP1325-20131115|6110_1  10 AANPAHAKYFKMIQMHIPRHIVEIKMKAEGIDPSILDN 47 
                 568999******************************96 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.25
   PF10152.4 78 a 78
                +
  MMETSP1325-20131115|6110_1 82 E 82
                1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.75
# Mc/sec: 466.49
//
Query:       MMETSP1325-20131115|6109_1  [L=398]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-11   42.8   6.5    3.3e-11   42.8   4.5    2.6  2  PF01569.16 PAP2 superfamily


Domain annotation for each model (and alignments):
>> PF01569.16  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   4.5   2.4e-15   3.3e-11       3     122 ..      79     200 ..      77     206 .. 0.84
   2 ?    0.4   0.6     0.031   4.3e+02      55      77 ..     258     280 ..     233     313 .. 0.61

  Alignments for each domain:
  == domain 1    score: 42.8 bits;  conditional E-value: 2.4e-15
                 -HHHHHH---GGG...HHHTTT---TTT----HHHHH--------S-SS----TTT---HHHHHHHH--------........-B----HHHHHHHHH---TT-----TT----------HHHHHHHH CS
  PF01569.16   3 lalllalllaalistvlKalfgrpRPdvlarddilldptegkaslfpsfPSgHaafafaaalllalllkrklgkr........vllallllilallvalsRvylgvHfpsDvlaGlllgiliallvyl 122
                 +++++++l+ ++++++ K +++r RP+++ r + ++  t++      +fPS  ++ a++++ l+  l++   +             ++l++++all +l R++lgvH+ sD+++G+llg+++ l+ ++
  MMETSP1325-20131115|6109_1  79 ILAIYTMLAMTVLTQIPKRFMHRVRPFAAGRAECFSNVTTS------CFPSRAVVGAVVFVNLAESLVHDSASAScmprwfpsWSSLCLIIACALLASLCRIVLGVHYASDCVGGFLLGVIVNLIGTA 200
                 45566666667778889**************9877776543......*****99999999999999999888888******98777788889999*************************99877665 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.031
                 -TTT---HHHHHHHH-------- CS
  PF01569.16  55 Haafafaaalllalllkrklgkr 77 
                 Ha+ ++++al+++l++ +  g  
  MMETSP1325-20131115|6109_1 258 HAFSTLFVALIFSLVFLCPAGGQ 280
                 66666666666666666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       657  (0.0480544); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.39s 00:00:01.14 Elapsed: 00:00:00.61
# Mc/sec: 1563.52
//
Query:       MMETSP1325-20131115|6111_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1171.05
//
Query:       MMETSP1325-20131115|6113_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 174.73
//
Query:       MMETSP1325-20131115|6117_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00098   18.5   0.0    0.00098   18.5   0.0    1.1  1  PF05724.6 Thiopurine S-methyltransferase (TPMT)


Domain annotation for each model (and alignments):
>> PF05724.6  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   7.2e-08   0.00098      50      87 ..       1      38 [.       1      77 [. 0.80

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 7.2e-08
                HHHHHH-BTTBEEE---S-HHHHHHHHHH----CCCCC CS
   PF05724.6 50 ldlvwlAeqgrevvGvelselAvekffeeanlepkvke 87
                +d++ lA++g++vvGv+    A+ +  +e++ + ++  
  MMETSP1325-20131115|6117_1  1 VDMAYLASKGHTVVGVDGVSVALDDLVAEQGTQGESAA 38
                59****************************99554333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 393.00
//
Query:       MMETSP1325-20131115|6118_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|6116_1  [L=437]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   14.2   4.5       0.14   12.8   3.1    2.0  1  PF13469.1 Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF13469.1  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   3.1     1e-05      0.14       4      91 ..      40     110 ..      37     324 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1e-05
   PF13469.1   4 filGlpRSGttlLaraLlalhpaelgllapqapaladapkglaeraallpllradllsalrrwdalprlldardaallllgalllvae 91 
                  ++ ++R+G+tl++ ++l+++++ l  l +                ++++++  +   + +r++a + +++ + a ++ ++ ++  a+
  MMETSP1325-20131115|6116_1  40 WVWNTGRCGSTLMH-RMLSTQEETLASLSE----------------PYWYSFVLRDTVDXMRRHATHLARASPPAPSCVMTKADAAAW 110
                 68899*********.777555553333333................333333333333333333333333333333332222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.36s 00:00:01.10 Elapsed: 00:00:00.60
# Mc/sec: 1745.35
//
Query:       MMETSP1325-20131115|6119_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-17   60.9   1.2    9.3e-17   60.4   0.8    1.3  1  PF00840.15 Glycosyl hydrolase family 7


Domain annotation for each model (and alignments):
>> PF00840.15  Glycosyl hydrolase family 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.8   6.8e-21   9.3e-17     158     231 ..       9      69 ..       2      70 .] 0.89

  Alignments for each domain:
  == domain 1    score: 60.4 bits;  conditional E-value: 6.8e-21
                 TT------------BTT--S--SB----B-----...SS.TT......--EE-EEEEEEEESSEEEEEEE-BS- CS
  PF00840.15 158 ktnkaGakygtGyCdaqCprdlkfinGeanvegwepskndanaGvGklGsCCseldiweansiataltphpCtk 231
                 + n+aG   g GyCdaqCp d+kf +      gw          +G+l sCC e+d++ean  ++altphpC +
  MMETSP1325-20131115|6119_1   9 NVNQAGWTRGLGYCDAQCPTDIKFTQD----AGW---------NAGELKSCCPEMDLLEANRLSAALTPHPCMN 69 
                 679*********************875....578.........468999***********************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|6120_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00054   20.1   0.1    0.00062   19.9   0.0    1.1  1  PF01138.16 3' exoribonuclease family, domain 1


Domain annotation for each model (and alignments):
>> PF01138.16  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   4.5e-08   0.00062       5      61 ..      15      67 ..      11      74 .. 0.83

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 4.5e-08
  PF01138.16  5 lsietg.vlsranGSaylelgdtkvlatvtgpieerpseerddaegeldveveyapfa 61
                +++etg v ++anG ++ ++g+t v+ t+ +   +  ++  d+ +  l v+++    a
  MMETSP1325-20131115|6120_1 15 VTFETGvVGKQANGAVMTSCGGTVVYSTACATEDP--QDV-DFIP--LRVDYQERFSA 67
                789***889**********************9976..455.8888..99999977544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|6122_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.8   0.0       0.12   12.2   0.0    1.2  1  PF05247.8 Flagellar transcriptional activator (FlhD)


Domain annotation for each model (and alignments):
>> PF05247.8  Flagellar transcriptional activator (FlhD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   8.6e-06      0.12      15      52 ..      16      53 ..       7      58 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 8.6e-06
   PF05247.8 15 LsYLlLaqrliredkaealfrlgiseevadllaklsla 52
                 s++ L++r++++d a+a+   g++++  d l  ls a
  MMETSP1325-20131115|6122_1 16 ASWIQLVKRIVQRDGASAMAATGVTHQDEDGLLPLSRA 53
                6899***********************99999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 557.41
//
Query:       MMETSP1325-20131115|6126_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.33s 00:00:00.63 Elapsed: 00:00:00.45
# Mc/sec: 351.47
//
Query:       MMETSP1325-20131115|6125_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.32s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 921.68
//
Query:       MMETSP1325-20131115|6127_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|6129_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0016   17.9   0.0     0.0018   17.8   0.0    1.1  1  PF02617.12 ATP-dependent Clp protease adaptor protein ClpS


Domain annotation for each model (and alignments):
>> PF02617.12  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.3e-07    0.0018      31      67 ..       7      43 ..       2      53 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.3e-07
  PF02617.12 31 gmteeqAeqimlevhreGravvgvgtleeaetkveqv 67
                g ++++Ae++  e+ + G+++ +v ++e+ae++v+q 
  MMETSP1325-20131115|6129_1  7 GIERAKAEEVYNEAQNLGSSIAIVVPQEHAEHYVQQF 43
                67899*****************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|6131_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 294.55
//
Query:       MMETSP1325-20131115|6132_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-16   57.7   0.0      1e-15   57.5   0.0    1.0  1  PF00637.15 Region in Clathrin and VPS


Domain annotation for each model (and alignments):
>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.0   7.3e-20     1e-15      20     121 ..      11     111 ..       3     115 .] 0.90

  Alignments for each domain:
  == domain 1    score: 57.5 bits;  conditional E-value: 7.3e-20
                 TT-GGGGTGGGTS--...-S--HHHHHHHHHHHHHTT--HHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHH--..--THHHHSS-SSTT--TTGGGTTTTT CS
  PF00637.15  20 aglleelieyLekvlketsrenpavqtallelyakyedpekleeflkknnnydlekvaklcekadlyeeavilykk..inefkkaisllkklkdfddaieyakk 121
                 +g++e l+ yL +v++ +  ++p v+++++e++ak+++++++e++++ ++ +++e+v  ++++a+l + +++++++  ++++++++  + + +++ + ie++ +
  MMETSP1325-20131115|6132_1  11 TGSYEGLFMYLGQVVNFS--QDPVVHFKYIEAAAKMQQYKEVERVCRDSTVFNPEEVKTFLMDAKLPDPRPLIHVCdrFDFIDEMTA-YLYSSNLTKYIEVYCQ 111
                 899************433..77**************************************************999999******888.9999999999977655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|6133_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|6134_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-08   33.2   0.9    3.7e-08   32.8   0.6    1.2  1  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.6   2.7e-12   3.7e-08       3      37 .]      27      62 ..      25      62 .. 0.95

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 2.7e-12
                HHHHHHHHH----HHHHHHHHHHTTT.SHHHHHHHH CS
  PF00627.26  3 eeaiqqLreMGfsreeakkALratnn.nvErAveyL 37
                +e++ q+++MG+++ +a++AL at++ +v++A++ L
  MMETSP1325-20131115|6134_1 27 QEMLSQVMAMGVDETQARQALDATGWvSVQMAINAL 62
                799******************************966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 273.27
//
Query:       MMETSP1325-20131115|6135_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.75
# Mc/sec: 198.10
//
Query:       MMETSP1325-20131115|6136_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-09   36.5   0.0    2.9e-09   36.3   0.0    1.1  1  PF09258.5 Glycosyl transferase family 64 domain
  ------ inclusion threshold ------
      0.098   12.4   0.0       0.12   12.2   0.0    1.0  1  PF05037.8 Protein of unknown function (DUF669)


Domain annotation for each model (and alignments):
>> PF09258.5  Glycosyl transferase family 64 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   4.3e-13   2.9e-09      76     139 ..       2      78 ..       1      80 [] 0.77

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 4.3e-13
   PF09258.5  76 TdavlslDddvllstseldfAFevwrsfpdrivGfvarshv.lde........kkgewsYts....kwtneysmvLt 139
                 T+a+l+lDdd+ l+ ++++  F +w+++  ++vG  +r    + +         + e++Y+s    + +  ys+ Lt
  MMETSP1325-20131115|6136_1   2 TEAILILDDDIKLHLQDIHNLFVAWQANKRNLVGVSPRWVKaMTKqtlhttgpWEFEYKYQSedplNPHGGYSLMLT 78 
                 9*************************************765322234442222344566666888878888888888 PP

>> PF05037.8  Protein of unknown function (DUF669)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.7e-05      0.12      67     126 ..      10      68 ..       4      71 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.7e-05
   PF05037.8  67 etgkyaqrrLnaiakalgvpegtkfesledflnqllgkplkvtvkkekseynGktyknlk 126
                 ++ k++ ++++++ +a ++ +   +   + +++++++++l+ t  +e  ey+ +++++l+
  MMETSP1325-20131115|6136_1  10 DDIKLHLQDIHNLFVAWQANKRNLVGVSPRWVKAMTKQTLHTTGPWE-FEYKYQSEDPLN 68 
                 67899******************************************.999888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 391.24
//
Query:       MMETSP1325-20131115|6138_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00095   19.0   0.1     0.0011   18.7   0.1    1.1  1  PF13505.1  Outer membrane protein beta-barrel domain
     0.0027   17.0   0.5     0.0032   16.7   0.4    1.1  1  PF03797.14 Autotransporter beta-domain
  ------ inclusion threshold ------
      0.018   14.6   0.7       0.56    9.8   0.5    2.0  1  PF13568.1  Outer membrane protein beta-barrel domain


Domain annotation for each model (and alignments):
>> PF13505.1  Outer membrane protein beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.1   2.5e-07    0.0011      56     148 ..       2     101 ..       1     107 [] 0.66

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 2.5e-07
   PF13505.1  56 dvfglegsyny..sggdeatvevadvdintlsisvnvgyaf..plsds.vllYggaGlgstdlkldvdgng.....ssdsdsdfgfglgaGveyelndnfsld 148
                 ++f+++++ ++   ++de++      ++++ + + ++g +f  p+++s  +l + +G+ s   ++++ +         + d +fg+++  G+++ l+d ++l 
  MMETSP1325-20131115|6138_1   2 PHFSVYAGWGWnrFSSDESFA---GSNMDFEETGYTYGLQFihPIGQSdMSLLARLGALSNHIEVENEDGDiiadsGHGYDAGFGWQIETGLSIPLSDSWNLM 101
                 689*******96644455555...344445555555555554355666568888888887666666555447897755556779999999********99984 PP

>> PF03797.14  Autotransporter beta-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.4   7.1e-07    0.0032      47     146 ..       3     105 ..       2     107 .] 0.85

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 7.1e-07
                 EEEEEEEEEEEEEEE....E-SSEEEEEEEEEEEEEEEEE..ETTEEEEEEEEEEEEEE.EEEEEE-----EEEEEEEEEEEEEEEEEE--EEECCCCEEEE--EE CS
  PF03797.14  47 tlGvafgygfssskv....dsrggkgksdsyslglYatwk.ksgglyldgvlqygrfdn.dtrrdldlgtsdnakgsyrgngfgasleagypfklgenltlePfag 146
                 +++v++g g +++++     +++ +   ++y  gl   +  +++ + l + l+  +++  ++  d d  +    +g+ +  gfg ++e+g+ ++l+++++l P + 
  MMETSP1325-20131115|6138_1   3 HFSVYAGWGWNRFSSdesfAGSNMDFEETGYTYGLQFIHPiGQSDMSLLARLGALSNHIeVENEDGDIIA---DSGHGYDAGFGWQIETGLSIPLSDSWNLMPSIR 105
                 6889999999999997777888888888899999999888888888888888888888877777777776...999999************************886 PP

>> PF13568.1  Outer membrane protein beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.5   0.00012      0.56      29      60 ..      75     106 ..       1     107 [] 0.59

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00012
   PF13568.1  29 nsqygpklgfsvgviveyrlnkkfglqpglsy 60 
                    y+  +g++++ + +++l++ ++l p+++y
  MMETSP1325-20131115|6138_1  75 GHGYDAGFGWQIETGLSIPLSDSWNLMPSIRY 106
                 12566688888999999999999999998888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 512.82
//
Query:       MMETSP1325-20131115|6137_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-06   26.7   1.8        2.7    8.1   0.0    4.6  4  PF13516.1  Leucine Rich repeat
     0.0007   19.0   7.9      0.049   13.1   0.9    3.1  3  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.014   14.9   5.3       0.02   14.5   0.4    2.9  3  PF13855.1  Leucine rich repeat
      0.016   15.0   1.6         58    4.1   0.0    4.2  4  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.0    0.0094        32       3      22 ..      87     106 ..      86     108 .. 0.83
   2 !    7.4   0.0    0.0015         5       1      23 [.     114     137 ..     114     138 .. 0.73
   3 ?    1.7   0.1       0.1   3.4e+02       2      22 ..     143     163 ..     142     165 .. 0.84
   4 !    8.1   0.0    0.0008       2.7       2      19 ..     170     187 ..     169     192 .. 0.90

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0094
   PF13516.1   3 nLtsLdLsnNqigdeGlsaL 22 
                  L  LdLs+N +     saL
  MMETSP1325-20131115|6137_1  87 RLVALDLSRNLLNPASTSAL 106
                 6888******9998888887 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0015
   PF13516.1   1 lknLtsLdLsnNqi.gdeGlsaLa 23 
                 l+ L  L+Ls N++ g   +++L+
  MMETSP1325-20131115|6137_1 114 LPALVKLNLSENPLmGRLAMESLC 137
                 577999*******82445556777 PP

  == domain 3    score: 1.7 bits;  conditional E-value: 0.1
   PF13516.1   2 knLtsLdLsnNqigdeGlsaL 22 
                 ++L+ L L  ++ ++e + +L
  MMETSP1325-20131115|6137_1 143 SKLQILKLDACGMDNEAINSL 163
                 689*********999987666 PP

  == domain 4    score: 8.1 bits;  conditional E-value: 0.0008
   PF13516.1   2 knLtsLdLsnNqigdeGl 19 
                 k+L +++L +N i+d G+
  MMETSP1325-20131115|6137_1 170 KTLVEINLARNLITDTGA 187
                 68999***********98 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.9   1.4e-05     0.049       2      36 ..      87     127 ..      86     138 .. 0.71
   2 !    8.6   0.3   0.00036       1.2       2      38 ..     144     184 ..     143     195 .. 0.79
   3 ?   -2.1   0.0      0.81   2.8e+03      24      36 ..     202     214 ..     199     216 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.4e-05
   PF12799.2   2 nLevLdLsnNnIkdlppe......lanLpnLktLnLsnNpi 36 
                  L  LdLs+N +   + +      + +Lp L  LnLs Np+
  MMETSP1325-20131115|6137_1  87 RLVALDLSRNLLNPASTSalmqqvVLKLPALVKLNLSENPL 127
                 567799999999743322223334789*************8 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00036
   PF12799.2   2 nLevLdLsnNnIkd..lppelan..Lpn.LktLnLsnNpisd 38 
                 +L+ L L  +   +  ++  l++  Lp+ L ++nL++N i+d
  MMETSP1325-20131115|6137_1 144 KLQILKLDACGMDNeaINS-LKKtsLPKtLVEINLARNLITD 184
                 7888888888886444888.885559977***********98 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.81
   PF12799.2  24 pnLktLnLsnNpi 36 
                 ++L +  L+ Np+
  MMETSP1325-20131115|6137_1 202 TKLLMVELEDNPL 214
                 5777778888886 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.4   5.9e-06      0.02      14      61 .]      77     127 ..      73     127 .. 0.85
   2 ?   11.5   0.9   4.8e-05      0.16       2      49 ..      87     140 ..      86     155 .. 0.60
   3 ?    0.7   0.2      0.11   3.9e+02       3      38 ..     145     183 ..     143     187 .. 0.50

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 5.9e-06
   PF13855.1  14 kvipdgaFkglsnLkvLdLsgnnlksispea.....fkgLpsLreLnLsgNrl 61 
                 + +++++F+  ++L  LdLs+n l+  s+ a       +Lp+L +LnLs N+l
  MMETSP1325-20131115|6137_1  77 TQLGNRSFQ--PRLVALDLSRNLLNPASTSAlmqqvVLKLPALVKLNLSENPL 127
                 678899999..9************877776666666889***********987 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 4.8e-05
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkgl.....snLkvLdLsgnnl.ksispeafkgLp 49 
                 +L  LdLs+N l   +++a+ +      + L +L+Ls+n l  ++ +e++ ++ 
  MMETSP1325-20131115|6137_1  87 RLVALDLSRNLLNPASTSALMQQvvlklPALVKLNLSENPLmGRLAMESLCKFI 140
                 566677777766666666655444444477777777777776677777744444 PP

  == domain 3    score: 0.7 bits;  conditional E-value: 0.11
   PF13855.1   3 LkeLdLsnNrlkvipdgaFkgl...snLkvLdLsgnnlk 38 
                 L+ L L+ + + + + +++k+    + L +++L +n ++
  MMETSP1325-20131115|6137_1 145 LQILKLDACGMDNEAINSLKKTslpKTLVEINLARNLIT 183
                 566666655444433334443344444556666655554 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.027        93       2      13 ..      88      99 ..      87     113 .. 0.84
   2 ?    4.1   0.0     0.017        58       2      13 ..     117     128 ..     116     139 .. 0.80
   3 ?   -0.8   0.0      0.71   2.4e+03       1      13 [.     144     156 ..     144     169 .. 0.76
   4 ?    3.0   0.0     0.039   1.3e+02       2      15 ..     172     188 ..     171     199 .. 0.76

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.027
                ESEEEETSSBCB CS
  PF00560.28  2 LeeLdLsgNnlt 13
                L  LdLs+N l 
  MMETSP1325-20131115|6137_1 88 LVALDLSRNLLN 99
                778******886 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.017
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                 L +L+Ls N+l 
  MMETSP1325-20131115|6137_1 117 LVKLNLSENPLM 128
                 889******985 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.71
                 TESEEEETSSBCB CS
  PF00560.28   1 nLeeLdLsgNnlt 13 
                 +L++L L+ + + 
  MMETSP1325-20131115|6137_1 144 KLQILKLDACGMD 156
                 6999999988765 PP

  == domain 4    score: 3.0 bits;  conditional E-value: 0.039
                 ESEEEETSSBCBC...H CS
  PF00560.28   2 LeeLdLsgNnlts...l 15 
                 L e++L +N +t+   +
  MMETSP1325-20131115|6137_1 172 LVEINLARNLITDtgaI 188
                 899********964652 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1335.11
//
Query:       MMETSP1325-20131115|6139_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|6140_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|6141_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|6142_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 982.04
//
Query:       MMETSP1325-20131115|6144_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0016   18.6   0.0      0.002   18.3   0.0    1.1  1  PF00725.17 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00725.17  3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   1.5e-07     0.002      10      85 ..       2      83 ..       1      87 [. 0.87

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 1.5e-07
                HHHHHHHHHHHTTS.S-HHHHHHHHHH.----...---HHHHH.H---HHHHHHHHHHHCTCCCH.GG-..HHHHHHHHTT- CS
  PF00725.17 10 pllneairlveegv.atpediDaamkkglGlp...mGpfelsd.lvgldvakkilevlaeelger.ayapsplleklveagr 85
                pl+nea+  +ee + a+p d+D + ++g+G+p    Gp+ +++ +vgl    + ++ +++ +++  + +ps+ll +l+e ++
  MMETSP1325-20131115|6144_1  2 PLVNEAFLTLEESIyARPSDVDVIYTNGYGFPdwrGGPMFWAEtEVGLPELLATIRRYQKLHPNVpHWRPSQLLVNLAESNE 83
                899*******9986489**************98656999999836999999998888999998888*******999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 553.82
//
Query:       MMETSP1325-20131115|6143_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|6146_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.067   12.0   0.0      0.075   11.9   0.0    1.1  1  PF00884.18 Sulfatase


Domain annotation for each model (and alignments):
>> PF00884.18  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.5e-06     0.075     289     377 ..       6     113 ..       2     135 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 5.5e-06
                 -S-EEGGGHHHHHHHH---......--TTST-----THHHH----.............S.TT..CCEEEEEEECTB.CCCCCTS.CCCSCCCE.......................EETTT-TCC- CS
  PF00884.18 289 eelvshvDlaptildlagil.pkvegpkdrlldgksllptlegka.............qaddlkavrllnsraivkagweavnldpadasgcs.......................ydltaDpgel 377
                 ++ v + Dlapt+l+l+g+   +++++++    g s+ +tl  ++             +          ++raiv+++  a  +                                ++l+ Dp el
  MMETSP1325-20131115|6146_1   6 DTAVYLHDLAPTLLQLTGVHgASESLNGQVSTNGASFRATLTSEGapyfrryilsayrE----------MMRAIVDTSSGAKLI--------VylsagkgrpsylrgsatilraelFNLRDDPYEL 113
                 5566688************54448999**********9999999755544444333220..........333333333222222........1333333335555555566666667777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 823.75
//
Query:       MMETSP1325-20131115|6147_1  [L=318]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-18   65.0   2.2    8.3e-09   34.0   0.1    2.7  2  PF00036.27 EF hand
      4e-15   55.5   1.0    7.6e-15   54.7   0.7    1.4  1  PF13499.1  EF-hand domain pair
      1e-13   49.7   1.0    2.6e-07   29.8   0.1    2.6  2  PF13405.1  EF-hand domain
    2.3e-13   49.3   2.7    2.7e-13   49.1   0.9    1.8  2  PF13833.1  EF-hand domain pair
    1.9e-12   45.7   1.1    1.4e-05   24.0   0.2    2.7  2  PF13202.1  EF hand
    0.00018   21.3   0.2    0.00076   19.3   0.0    1.9  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
     0.0033   17.0   0.0      0.005   16.4   0.0    1.2  1  PF12763.2  Cytoskeletal-regulatory complex EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.2   6.6e-11   1.3e-07       4      29 .]      75     100 ..      72     100 .. 0.93
   2 !   34.0   0.1   4.2e-12   8.3e-09       1      28 [.     109     136 ..     109     137 .. 0.95

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 6.6e-11
                 HHHHHHCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkealkkl 29 
                  aF+e+DkDg+G++s +E++++++k+
  MMETSP1325-20131115|6147_1  75 AAFQEYDKDGSGFLSSDELRDVMSKM 100
                 79*********************986 PP

  == domain 2    score: 34.0 bits;  conditional E-value: 4.2e-12
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkk 28 
                 el+ +++e+D+DgdG+I+++Ef++++++
  MMETSP1325-20131115|6147_1 109 ELNTMMREADTDGDGQINYKEFVKVMTS 136
                 7899**********************86 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.7   3.9e-18   7.6e-15       2      66 .]      73     134 ..      68     134 .. 0.88

  Alignments for each domain:
  == domain 1    score: 54.7 bits;  conditional E-value: 3.9e-18
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels.deevrevldyifkelDkngdGvlsfeEflqai 66 
                 ++ aF+++Dkdg+g+l+ +eL+ ++ ++g+ ++ ++e+ ++    ++e+D++gdG++++ Ef++ +
  MMETSP1325-20131115|6147_1  73 MFAAFQEYDKDGSGFLSSDELRDVMSKMGHSMMsERELNTM----MREADTDGDGQINYKEFVKVM 134
                 4569*************************866666666666....*****************9976 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.1   1.3e-10   2.6e-07       1      30 [.      72     100 ..      72     105 .. 0.90
   2 !   18.2   0.1   7.3e-07    0.0014       3      27 ..     111     135 ..     109     143 .. 0.86

  Alignments for each domain:
  == domain 1    score: 29.8 bits;  conditional E-value: 1.3e-10
                 HHH---GCC-------B---HHHHHHH.H- CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrdaLrksl 30 
                 ++ +aF+ +Dkdg+G+++ +ELrd+++k +
  MMETSP1325-20131115|6147_1  72 RMFAAFQEYDKDGSGFLSSDELRDVMSK-M 100
                 5789**********************95.4 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 7.3e-07
                 H---GCC-------B---HHHHHHH CS
   PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                 +   +  D+dgdG+i+ +E++++++
  MMETSP1325-20131115|6147_1 111 NTMMREADTDGDGQINYKEFVKVMT 135
                 5566788****************98 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.1    0.0035       6.7      26      51 ..      71      97 ..      55      99 .. 0.76
   2 !   49.1   0.9   1.4e-16   2.7e-13       2      52 ..      85     135 ..      84     137 .. 0.94

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0035
   PF13833.1 26 e.vdilfrefDtdgdGkisfeEFcvll 51
                + + + f e D dg+G +s +E  +++
  MMETSP1325-20131115|6147_1 71 DrMFAAFQEYDKDGSGFLSSDELRDVM 97
                3355667778************98887 PP

  == domain 2    score: 49.1 bits;  conditional E-value: 1.4e-16
   PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvlle 52 
                 +G ++ +eL++ ++++g +++se e+ +++re+DtdgdG i+++EF+++++
  MMETSP1325-20131115|6147_1  85 SGFLSSDELRDVMSKMGHSMMSERELNTMMREADTDGDGQINYKEFVKVMT 135
                 6999*********9888888****************************997 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.2   7.4e-09   1.4e-05       3      25 .]      75      97 ..      73      97 .. 0.90
   2 !   19.8   0.0   1.6e-07   0.00031       4      25 .]     113     134 ..     110     134 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 7.4e-09
                HHHHHH--S----B-HHHHHHHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreELkrlv 25
                ++F+++D++g+G++s +EL+ ++
  MMETSP1325-20131115|6147_1 75 AAFQEYDKDGSGFLSSDELRDVM 97
                56*****************9875 PP

  == domain 2    score: 19.8 bits;  conditional E-value: 1.6e-07
                 HHHHH--S----B-HHHHHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELkrlv 25 
                 + r++D++gDG+I+ +E+ +++
  MMETSP1325-20131115|6147_1 113 MMREADTDGDGQINYKEFVKVM 134
                 6799**************8865 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.9e-07   0.00076      59     112 ..      76     132 ..      40     133 .. 0.91
   2 ?   -0.1   0.1      0.43   8.4e+02      29      72 ..     141     185 ..     131     188 .. 0.56

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 3.9e-07
   PF10591.4  59 kFnqlDtnkdkvlsksElaplrapl...vklehCikeffksCDadkdkkisleEWck 112
                  F++ D++  ++ls  El+++ +++   +  e+  +++++++D+d d++i+ +E+ k
  MMETSP1325-20131115|6147_1  76 AFQEYDKDGSGFLSSDELRDVMSKMghsMMSERELNTMMREADTDGDGQINYKEFVK 132
                 699*********************9999999***********************986 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.43
   PF10591.4  29 erdeekehseelekeaek.knskeckeaveWkFnqlDtnkdkvls 72 
                 ++de  eh +e e++a   +++k+  + ++W+  + +t+ +++l+
  MMETSP1325-20131115|6147_1 141 DKDEAAEHAAEAERRAMGwSHTKMKAKTAGWEDVRNETKGEGILD 185
                 334444556665555543256677777788876666666666665 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.6e-06     0.005       8      70 ..      69     135 ..      63     156 .. 0.79

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 2.6e-06
   PF12763.2   8 eikkyweifsglk.pednkltgdkvapvlk...nskleedklekiwdladidedgkldfeefciamr 70 
                 e ++ +  f+  + + +  l++d++  v+     s ++e +l+ +   ad d dg+++++ef+ +m 
  MMETSP1325-20131115|6147_1  69 ESDRMFAAFQEYDkDGSGFLSSDELRDVMSkmgHSMMSERELNTMMREADTDGDGQINYKEFVKVMT 135
                 556666667765414567888888887765222699***************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       597  (0.0436659); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1524.08
//
Query:       MMETSP1325-20131115|6149_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 566.41
//
Query:       MMETSP1325-20131115|6150_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.41    9.6   6.6       0.47    9.4   4.6    1.0  1  PF10488.4 Phosphatase-1 catalytic subunit binding region


Domain annotation for each model (and alignments):
>> PF10488.4  Phosphatase-1 catalytic subunit binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   4.6   3.4e-05      0.47      48     128 ..       5      85 ..       2      98 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 3.4e-05
   PF10488.4  48 sDssllesdlElddEgek.LWesleksvdpynplsftatlqtavtekpkeeseesdwsgeendssaedslasteevsssedd 128
                 sDss   sd E + Ege  L e+l  s + +++ ++   l +++ e+p  +  e   s++++d +a +   s++  s  + d
  MMETSP1325-20131115|6150_1   5 SDSSSDTSDDEEEGEGEGgLGEKLG-SFNDEEEDELRDELYDVWAEAPTSKYAEGPVSNSSGDATAGGDADSQPALSRESSD 85 
                 8999999999999999963666666.**************************9***********999999999988865443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 489.05
//
Query:       MMETSP1325-20131115|6152_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0049   16.3   2.5     0.0049   16.3   1.7    1.1  1  PF04156.9  IncA protein
  ------ inclusion threshold ------
      0.011   14.1   1.5      0.011   14.1   1.0    1.1  1  PF03148.9  Tektin family
      0.023   12.4   4.4      0.024   12.3   3.0    1.0  1  PF05622.7  HOOK protein
      0.064   13.3   0.9      0.065   13.3   0.6    1.1  1  PF07028.6  Protein of unknown function (DUF1319)
      0.064   13.0   0.4      0.092   12.5   0.3    1.3  1  PF05377.6  Flagella accessory protein C (FlaC)
      0.095   12.3   1.1       0.23   11.0   0.8    1.7  1  PF00126.22 Bacterial regulatory helix-turn-helix protein, lysR family
       0.11   12.4   2.5        6.5    6.7   0.1    2.1  2  PF00512.20 His Kinase A (phospho-acceptor) domain
       0.19   12.0   5.0        0.3   11.3   3.5    1.5  1  PF05400.8  Flagellar protein FliT
       0.38   10.0   3.9       0.45    9.7   2.7    1.1  1  PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
        0.5    9.8   3.7       0.95    8.9   2.5    1.6  1  PF10224.4  Predicted coiled-coil protein (DUF2205)
          5    7.1   8.0        2.7    8.0   1.2    2.3  2  PF14389.1  Leucine-zipper of ternary complex factor MIP1


Domain annotation for each model (and alignments):
>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   1.7     4e-06    0.0049     113     150 ..      25      65 .]       2      65 .] 0.74

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 4e-06
   PF04156.9 113 dleedlellq...eelksleerlesleesikelakeirelr 150
                 +++e +el++   + l+  ++rl++l+++i +l+kei++l 
  MMETSP1325-20131115|6152_1  25 LINEIFELEEgleTHLRTASQRLQELAKDILKLQKEIQDLD 65 
                 34444444444447779999999999999999999999986 PP

>> PF03148.9  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.0   8.9e-06     0.011     251     290 ..      24      63 ..       6      65 .] 0.59

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 8.9e-06
   PF03148.9 251 krieetkeakekLenqlkktleeiaeaeknieeLekaikd 290
                 + i+e+ e++e Le++l++  + ++e+ k+i +L+k+i+d
  MMETSP1325-20131115|6152_1  24 ELINEIFELEEGLETHLRTASQRLQELAKDILKLQKEIQD 63 
                 2344555555555555555555555555555555555554 PP

>> PF05622.7  HOOK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   3.0   1.9e-05     0.024     463     527 ..       4      63 ..       2      65 .] 0.77

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.9e-05
   PF05622.7 463 rLqrEnKmLrlqqegsekeriteLqqlLedanrrkeeLetekrlakerilelkaqvedlqkalqe 527
                 rL +E  +Lr + e+          +l+++  + +e Let++r+a +r++el + + +lqk++q+
  MMETSP1325-20131115|6152_1   4 RLTAEQGALRAARESG-----LVQRELINEIFELEEGLETHLRTASQRLQELAKDILKLQKEIQD 63 
                 5555555555555555.....223456788888999**************************997 PP

>> PF07028.6  Protein of unknown function (DUF1319)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.6   5.2e-05     0.065      44      83 ..      22      61 ..       3      64 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 5.2e-05
   PF07028.6 44 kleeikklskivkeqrkdlkelekeldklkkelkalrkey 83
                + e i+++ ++++ ++++l+ ++++l++l+k++ +l+ke+
  MMETSP1325-20131115|6152_1 22 QRELINEIFELEEGLETHLRTASQRLQELAKDILKLQKEI 61
                67899*********************************97 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.3   7.4e-05     0.092      12      40 ..      36      64 ..      24      64 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.4e-05
   PF05377.6 12 lstvvatvrkeleelsksvekikenvkdv 40
                l+t + t+ + l+el k++ k++++++d+
  MMETSP1325-20131115|6152_1 36 LETHLRTASQRLQELAKDILKLQKEIQDL 64
                7899***********************97 PP

>> PF00126.22  Bacterial regulatory helix-turn-helix protein, lysR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.8   0.00019      0.23      14      47 ..       9      42 ..       3      51 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00019
                TSHHHHHHHTTS-HHHHHHHHHHHHHH-----EE CS
  PF00126.22 14 gsftaAAerLglsqpavSrqikrLEeelgvpLfe 47
                +   +AA++ gl q  +   i +LEe l + L +
  MMETSP1325-20131115|6152_1  9 QGALRAARESGLVQRELINEIFELEEGLETHLRT 42
                55679***********************999865 PP

>> PF00512.20  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1    0.0053       6.5      33      63 ..       5      33 ..       1      38 [. 0.85
   2 ?    6.5   0.1    0.0057       7.1      46      65 ..      41      60 ..      36      63 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0053
  PF00512.20 33 lteeelrealeiirdeaerlraliedlLdls 63
                lt+e+   al+ +r++    r+li+++ +l+
  MMETSP1325-20131115|6152_1  5 LTAEQ--GALRAARESGLVQRELINEIFELE 33
                55555..99******************9986 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0057
  PF00512.20 46 rdeaerlraliedlLdlsri 65
                r +++rl++l +d+L l ++
  MMETSP1325-20131115|6152_1 41 RTASQRLQELAKDILKLQKE 60
                7889***********99986 PP

>> PF05400.8  Flagellar protein FliT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.5   0.00025       0.3      41      80 ..      21      60 ..       2      64 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00025
   PF05400.8 41 kkrellrrilandaairellqprldelekelkqlrrrkka 80
                 +rel+ +i ++++ ++++l++  ++l+++ k + + +k+
  MMETSP1325-20131115|6152_1 21 VQRELINEIFELEEGLETHLRTASQRLQELAKDILKLQKE 60
                589****************998777777766666555554 PP

>> PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.7   0.00036      0.45       2      42 ..      24      65 .]      23      65 .] 0.91

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00036
   PF10018.4  2 elaedLlaaddeLksalkel.eehqenqarikeLraeaeslD 42
                el++++ ++++ L+++l ++ ++ qe+ + i++L++e++ lD
  MMETSP1325-20131115|6152_1 24 ELINEIFELEEGLETHLRTAsQRLQELAKDILKLQKEIQDLD 65
                6899999**********9984679***************998 PP

>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.5   0.00077      0.95      19      54 ..      23      62 ..       4      65 .] 0.79

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00077
   PF10224.4 19 qrlieqvleLqdsLe....dLseRveaVkeendKLeseNk 54
                 +li+++ eL ++Le      s+R+++  ++ +KL++e +
  MMETSP1325-20131115|6152_1 23 RELINEIFELEEGLEthlrTASQRLQELAKDILKLQKEIQ 62
                5799999999988752111568999999999999999966 PP

>> PF14389.1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.4     0.052        64      57      69 ..      23      35 ..       1      43 [. 0.66
   2 ?    8.0   1.2    0.0021       2.7       5      26 ..      42      63 ..      38      64 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.052
   PF14389.1 57 kellkeiavlEae 69
                +el++ei  lE+ 
  MMETSP1325-20131115|6152_1 23 RELINEIFELEEG 35
                3555555555543 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0021
   PF14389.1  5 assekrsaLeqeVkkLqkqLqd 26
                + s++ ++L ++++kLqk+ qd
  MMETSP1325-20131115|6152_1 42 TASQRLQELAKDILKLQKEIQD 63
                4578889***********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       831  (0.0607812); expected 273.4 (0.02)
Passed bias filter:                      683  (0.0499561); expected 273.4 (0.02)
Passed Vit filter:                       132  (0.00965477); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|6153_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.3    8.5   3.5        1.3    8.5   2.1    1.3  1  PF00060.21 Ligand-gated ion channel


Domain annotation for each model (and alignments):
>> PF00060.21  Ligand-gated ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.1   9.9e-05       1.3      49      87 ..      13      48 ..       2      60 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 9.9e-05
                HHHHXXXTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00060.21 49 lwfvlgalvqqgcdesprsvsgRilvavwwffvlillss 87
                lw+    ++qq    ++++v++R lv + ++++l++ls 
  MMETSP1325-20131115|6153_1 13 LWL---CVMQQQNTTHLTCVMARTLVWCTLLLALMVLSK 48
                444...5799*************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       867  (0.0634143); expected 273.4 (0.02)
Passed bias filter:                      540  (0.0394968); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 370.76
//
Query:       MMETSP1325-20131115|6154_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 312.99
//
Query:       MMETSP1325-20131115|6155_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 469.87
//
Query:       MMETSP1325-20131115|6151_1  [L=461]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.74u 0.37s 00:00:01.10 Elapsed: 00:00:00.57
# Mc/sec: 1904.69
//
Query:       MMETSP1325-20131115|6159_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-07   29.0   0.3    9.9e-07   28.8   0.2    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
    1.9e-05   24.9   0.0    2.9e-05   24.3   0.0    1.3  1  PF13637.1  Ankyrin repeats (many copies)
    2.3e-05   23.8   0.1       0.14   11.8   0.0    2.2  2  PF00023.25 Ankyrin repeat
    0.00015   21.7   0.2    0.00048   20.1   0.0    1.8  2  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.2   2.9e-10   9.9e-07      43      85 ..       2      44 ..       1      49 [. 0.92

  Alignments for each domain:
  == domain 1    score: 28.8 bits;  conditional E-value: 2.9e-10
   PF12796.2 43 klLleagadvnakdkegntpLhlAvrnghlelvklLlekgadv 85
                ++L+e+gad+nak+++g+ +L +A  n+++++v +L e+ a v
  MMETSP1325-20131115|6159_1  2 EVLVEKGADLNAKNEDGQAALDYAKANNKTDCVAFLQERAAAV 44
                68**********************************9997766 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   8.6e-09   2.9e-05      19      53 ..       3      37 ..       2      38 .. 0.95

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 8.6e-09
   PF13637.1 19 lLlekgidinrtdesGntaLhiAalrgnieilklL 53
                 L+ekg+d+n+++e+G  aL++A  ++  +++ +L
  MMETSP1325-20131115|6159_1  3 VLVEKGADLNAKNEDGQAALDYAKANNKTDCVAFL 37
                699********************99999*****99 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   4.1e-05      0.14      20      32 ..       3      15 ..       2      16 .. 0.90
   2 !   10.3   0.0   0.00013      0.44       1      29 [.      17      45 ..      17      51 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.1e-05
                HHHHTTSSTTHBH CS
  PF00023.25 20 lLlsqGAdlnaqd 32
                 L+++GAdlna++
  MMETSP1325-20131115|6159_1  3 VLVEKGADLNAKN 15
                79*********98 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00013
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdln 29
                dG+ +L +A  ++ +++v +L ++ A + 
  MMETSP1325-20131115|6159_1 17 DGQAALDYAKANNKTDCVAFLQERAAAVQ 45
                8999*****************99877665 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.4e-07   0.00048      34      56 .]       3      25 ..       1      25 [. 0.93
   2 ?   -0.4   0.0      0.41   1.4e+03      31      36 ..      33      38 ..      26      56 .. 0.54

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.4e-07
   PF13857.1 34 lLlapgadlnlrdsdgltaldlA 56
                 L+++gadln++++dg+ ald+A
  MMETSP1325-20131115|6159_1  3 VLVEKGADLNAKNEDGQAALDYA 25
                6889******************9 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.41
   PF13857.1 31 vvrlLl 36
                +v +L 
  MMETSP1325-20131115|6159_1 33 CVAFLQ 38
                443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 252.71
//
Query:       MMETSP1325-20131115|6158_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0055   16.9   0.1     0.0095   16.1   0.1    1.4  1  PF12796.2  Ankyrin repeats (3 copies)
     0.0064   16.5   0.0      0.012   15.7   0.0    1.5  1  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
       0.41   10.4   1.7        2.5    7.9   0.3    2.7  2  PF00023.25 Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   2.1e-06    0.0095      47      81 ..       3      34 ..       2      45 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.1e-06
   PF12796.2 47 eagadvnakdkegntpLhlAvrnghlelvklLlek 81
                ++gadv+a  k+g t+Lhl++   ++el+k+Ll+ 
  MMETSP1325-20131115|6158_1  3 KHGADVQAMAKDGSTALHLCA---SAELAKYLLDL 34
                59*******************...57899999986 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.7e-06     0.012       4      54 ..       4      51 ..       3      52 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.7e-06
   PF13857.1  4 hg.padvnatdeggntpLhlAakggalevvrlLl.apgadlnlrdsdgltald 54
                hg +++++a d++  t+Lhl a+   +e++++Ll    a l+ +d++g+ +++
  MMETSP1325-20131115|6158_1  4 HGaDVQAMAKDGS--TALHLCAS---AELAKYLLdLDKAFLDKQDAQGRKPYE 51
                7855566666655..********...********9999999999999999998 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.23   1.1e+03      23      30 ..       3      10 ..       3      12 .. 0.84
   2 ?    7.9   0.3   0.00054       2.5       1      12 [.      14      25 ..      14      44 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.23
                HTTSSTTH CS
  PF00023.25 23 sqGAdlna 30
                ++GAd+ a
  MMETSP1325-20131115|6158_1  3 KHGADVQA 10
                59***987 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00054
                TSCBHHHHHHHT CS
  PF00023.25  1 dGfTPLHlAalr 12
                dG T+LHl+a+ 
  MMETSP1325-20131115|6158_1 14 DGSTALHLCASA 25
                89******7764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 543.94
//
Query:       MMETSP1325-20131115|6160_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   14.0   0.2      0.023   13.8   0.1    1.1  1  PF03976.9  Polyphosphate kinase 2 (PPK2)
      0.045   13.5   2.4      0.059   13.1   1.7    1.2  1  PF06667.7  Phage shock protein B
      0.045   11.9   0.5      0.045   11.9   0.4    1.1  1  PF09726.4  Transmembrane protein
      0.049   13.2   0.2      0.058   13.0   0.1    1.0  1  PF00875.13 DNA photolyase
        0.1   12.3   0.5       0.14   11.9   0.4    1.2  1  PF10157.4  Uncharacterized conserved protein (DUF2365)
       0.13   11.7   0.4       0.17   11.4   0.2    1.1  1  PF08861.5  Domain of unknown function DUF1828


Domain annotation for each model (and alignments):
>> PF03976.9  Polyphosphate kinase 2 (PPK2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1     1e-05     0.023       5      55 ..      27      77 ..      22      79 .] 0.77

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1e-05
   PF03976.9  5 deyeeelaklqielvklqekvkaegkklvvifegrDaAGKgGaikrvteal 55
                de++++++++  +l++  e ++++ +++ ++ ++ DaA K G ++ + ++l
  MMETSP1325-20131115|6160_1 27 DEKDKAKKEELEKLLQENETLQKKLHNMQILVDAEDAATKSGSMAPLHNTL 77
                44445555555677777888889999999**************99888877 PP

>> PF06667.7  Phage shock protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.7   2.6e-05     0.059      24      70 ..      20      63 ..      10      67 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.6e-05
   PF06667.7 24 LHYrskkkksqglseedekeLeeLlekaekleeRietlErildaesp 70
                LHY +   +++   +  ++eLe+Ll++ e l+++++ +  ++dae+ 
  MMETSP1325-20131115|6160_1 20 LHYANEVDEKD---KAKKEELEKLLQENETLQKKLHNMQILVDAEDA 63
                66666655543...345678************************986 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.4     2e-05     0.045     449     480 ..      24      55 ..       3      68 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2e-05
   PF09726.4 449 sllsslerslkselqqlkkendllqtklqelv 480
                 + +++++++ k+el++l +en+ lq+kl+++ 
  MMETSP1325-20131115|6160_1  24 NEVDEKDKAKKEELEKLLQENETLQKKLHNMQ 55 
                 678899***********************995 PP

>> PF00875.13  DNA photolyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   2.5e-05     0.058      79     141 ..       7      70 ..       3      74 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHCT-SEEEEE---S---------HHHHHH.-.--EEEEE--SSSS-CCCS-----.- CS
  PF00875.13  79 vlpelakelgvsavyanrdyepdererdeavkealr.kagievhsfddhllvepgevktkkgkp 141
                 v+++  + l ++++++ ++++   ++ +e++++ l+ ++ ++ + ++ ++lv+ +++ tk+g++
  MMETSP1325-20131115|6160_1   7 VMRQQTAMLYADHLHYANEVDEKDKAKKEELEKLLQeNETLQKKLHNMQILVDAEDAATKSGSM 70 
                 66777777889*************************446889999*************999976 PP

>> PF10157.4  Uncharacterized conserved protein (DUF2365)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.4   6.2e-05      0.14     116     147 ..      32      63 ..      29      65 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.2e-05
   PF10157.4 116 AkaeeiekslkpvekLaqrireikRlvdlles 147
                 Ak ee+ek l++ e+L +++++++ lvd+ ++
  MMETSP1325-20131115|6160_1  32 AKKEELEKLLQENETLQKKLHNMQILVDAEDA 63 
                 89**************************8765 PP

>> PF08861.5  Domain of unknown function DUF1828
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   7.6e-05      0.17      33      80 ..      19      67 ..      17      74 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.6e-05
   PF08861.5 33 nLesagidlekskkRkkilenilskfgielee.gelivkvteenlaqak 80
                +L +a++  ek+k +k++le++l+++   +++ +++ + v+ e+ a++ 
  MMETSP1325-20131115|6160_1 19 HLHYANEVDEKDKAKKEELEKLLQENETLQKKlHNMQILVDAEDAATKS 67
                8899988888999************99999999*****99999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2040  (0.14921); expected 273.4 (0.02)
Passed bias filter:                     1369  (0.100132); expected 273.4 (0.02)
Passed Vit filter:                       190  (0.013897); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.50s 00:00:00.96 Elapsed: 00:00:00.63
# Mc/sec: 300.50
//
Query:       MMETSP1325-20131115|6156_1  [L=397]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.36s 00:00:01.03 Elapsed: 00:00:00.56
# Mc/sec: 1669.04
//
Query:       MMETSP1325-20131115|6163_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|6162_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-10   40.0   0.8    2.1e-10   39.7   0.5    1.1  1  PF04685.8 Protein of unknown function, DUF608


Domain annotation for each model (and alignments):
>> PF04685.8  Protein of unknown function, DUF608
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.5   1.6e-14   2.1e-10     317     364 ..      36      83 ..      29      84 .. 0.95

  Alignments for each domain:
  == domain 1    score: 39.7 bits;  conditional E-value: 1.6e-14
   PF04685.8 317 ealkvakgvydrlserlglqfntpeaitaektyrgshYmrplaiwaiq 364
                  a+++akg+++  +++ g+++ tpe ++++++yr+++Ymrpl++wa+q
  MMETSP1325-20131115|6162_1  36 AAFETAKGIWESGWGEFGYWYATPEGWENSGNYRSLGYMRPLSVWAMQ 83 
                 59*********************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|6164_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|6165_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 416.76
//
Query:       MMETSP1325-20131115|6168_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.7   0.5       0.12   11.6   0.3    1.1  1  PF00320.22 GATA zinc finger


Domain annotation for each model (and alignments):
>> PF00320.22  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   8.8e-06      0.12      12      27 ..      18      32 ..      15      33 .] 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.8e-06
                ----SS-----SSHHH CS
  PF00320.22 12 WRrgpsgnrtLCnaCg 27
                W ++++ +  LCn+Cg
  MMETSP1325-20131115|6168_1 18 WFNSGDAEN-LCNPCG 32
                666777788.*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.26u 0.39s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 149.21
//
Query:       MMETSP1325-20131115|6167_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   14.7   0.4      0.038   14.1   0.3    1.3  1  PF12355.3 Down syndrome cell adhesion molecule C terminal


Domain annotation for each model (and alignments):
>> PF12355.3  Down syndrome cell adhesion molecule C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   2.8e-06     0.038      48      77 ..      23      53 ..      14      63 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.8e-06
   PF12355.3 48 grrsvgs.arnpvsgspepppppprnhdqsn 77
                g  ++ s a  p++ +peppppp r+    n
  MMETSP1325-20131115|6167_1 23 GDDAISSrAITPSAAAPEPPPPPTRQGTTHN 53
                55666652445**************876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 563.14
//
Query:       MMETSP1325-20131115|6169_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-08   34.5   0.0    1.8e-08   34.1   0.0    1.2  1  PF10409.4 C2 domain of PTEN tumour-suppressor protein


Domain annotation for each model (and alignments):
>> PF10409.4  C2 domain of PTEN tumour-suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.0   1.3e-12   1.8e-08       2      98 ..       3     121 ..       2     124 .] 0.81

  Alignments for each domain:
  == domain 1    score: 34.1 bits;  conditional E-value: 1.3e-12
                 ----EEEEEEEEES----TT-----EEEEEE----EEE.........E----GGGS---......................-TT---EEEEEEEEE---EEEEEEEEEEE--S--EEEEEEE------ CS
   PF10409.4   2 npkrlelksvileriPnfktrggckpkvevyngkkklf.........keekstkknked......................rakefivkedkpvpveGDvrveffhkgskklskekifrvwFNTsFie 98 
                 ++k++ l++++++  P++++ ++++p++e++   +++          +       ++++                            ++++ ++p  + vr++ +h+g    +++k f +wF+TsF++
  MMETSP1325-20131115|6169_1   3 PKKAIVLTGMTFSHAPSLSITNSFSPYFEISIPGTDKYmergtmgsfE------PSNKNalkstdflkagsykrvdsdggaVNTALHFPLP-RIPAINEVRIDAMHQG--ATQRNKAFTLWFHTSFLS 121
                 789999*************************99999988997666551......3333334445577777778888889876667777777.99**************..99**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 560.66
//
Query:       MMETSP1325-20131115|6171_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-08   33.8   0.1    1.8e-08   33.8   0.1    1.1  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.1   1.3e-12   1.8e-08     260     309 ..       9      58 ..       1      66 [. 0.80

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 1.3e-12
                 T----EEEEE--.-TT.S--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT CS
  PF00632.20 260 elhpkftivrkseded.rLPtasTCfnyLkLpdYsskeilkekLltAieeg 309
                  l+p  ti+ +  ++  + Pta+TC+++L Lp+Y+sk  l+  L  A+  +
  MMETSP1325-20131115|6171_1   9 RLKPDTTIELTL-KHGcKIPTAHTCTKQLNLPRYKSKAELEAALPEALASS 58 
                 456678888877.55548**************************9998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 352.67
//
Query:       MMETSP1325-20131115|6174_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.64
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|6177_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   14.2   0.0      0.031   14.1   0.0    1.0  1  PF07654.10 Immunoglobulin C1-set domain


Domain annotation for each model (and alignments):
>> PF07654.10  Immunoglobulin C1-set domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.2e-06     0.031      22      69 ..       2      52 ..       1      53 [. 0.88

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.2e-06
                SS-EEEEEEETTEEECTSEEEEEEEE.TTTSEEEEEEEEEEE..HHHSSEE CS
  PF07654.10 22 PpdievtWlkngkevtegvesteelp.nsdgtyqlsssLtvt..pesgdey 69
                P+d+ev+ +  g evt++++   + +  +d+    +  L++t   ++gd+y
  MMETSP1325-20131115|6177_1  2 PSDVEVQVMDTGAEVTSEEQAAAQKKaYEDNLAIQVTDLHFTyaTRDGDRY 52
                99*******************999997899999999999999766777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 244.16
//
Query:       MMETSP1325-20131115|6178_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        4.9    5.8   7.7        5.5    5.6   5.3    1.1  1  PF14362.1 Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   5.3    0.0004       5.5     146     213 ..      11      74 ..       2      90 .. 0.55

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0004
   PF14362.1 146 alqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaq.aeletlkaqldaaqaele 213
                  +++++++  a+ ++ e+++  + +G      +G+Gp++ +++++ +a+  a  +++ ++ +++   ++
  MMETSP1325-20131115|6178_1  11 MAKETAQATTARRKRXEQTLAHQGQG----HAPGQGPAAASAQTQAQAQLpAVNQRAMER-TETTVHVN 74 
                 34444555555555566666666555....69*****99999888777774333333333.33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       685  (0.0501024); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 423.97
//
Query:       MMETSP1325-20131115|6179_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 520.75
//
Query:       MMETSP1325-20131115|6180_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 385.30
//
Query:       MMETSP1325-20131115|6182_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   13.0   0.0      0.083   12.7   0.0    1.0  1  PF04725.7 Photosystem II 10 kDa polypeptide PsbR


Domain annotation for each model (and alignments):
>> PF04725.7  Photosystem II 10 kDa polypeptide PsbR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.1e-06     0.083      43      90 ..      10      56 ..       6      58 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 6.1e-06
   PF04725.7 43 yGanvdGyspiytadewsesGdvyvgGttGliiwavtllgllagGall 90
                y   vd y p+y + +    Gd+    ++ l+ ++v+++++   G+ll
  MMETSP1325-20131115|6182_1 10 YAGVVDPYPPLYLPPDGYGGGDTSNDWKHQLLRFSVVVVVIT-LGVLL 56
                7788******************************99887764.45555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|6184_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-08   31.7   0.1    0.00042   19.9   0.0    2.0  2  PF00989.19 PAS fold
     0.0011   18.8   0.2      0.011   15.6   0.0    1.9  2  PF08448.5  PAS fold
  ------ inclusion threshold ------
      0.032   14.5   0.1       0.32   11.3   0.0    2.0  2  PF13426.1  PAS domain


Domain annotation for each model (and alignments):
>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   8.2e-05      0.38      87     113 .]       3      29 ..       1      29 [. 0.95
   2 !   19.9   0.0   9.2e-08   0.00042       2      28 ..      38      64 ..      37      67 .] 0.90

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 8.2e-05
                 EEEEEEEEEECS-S-E-.CEEEEEEES CS
  PF00989.19  87 ihlevraspvrdaggeilgflgvlrdi 113
                 ++++++a+++rd +g + g +g+++di
  MMETSP1325-20131115|6184_1   3 VEVLLNATSRRDVEGSVVGMVGIGQDI 29 
                 799***********************8 PP

  == domain 2    score: 19.9 bits;  conditional E-value: 9.2e-08
                CHHHCCCT--SBEEEES----EEEETH CS
  PF00989.19  2 dlraileslpdpifvvDedgrilyvNa 28
                ++ ++++++ +pif+vD +g+++ +N+
  MMETSP1325-20131115|6184_1 38 EYIRLIDTANAPIFGVDTKGKVTVWNK 64
                6779**********************8 PP

>> PF08448.5  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.4e-06     0.011      81     108 ..       5      32 ..       2      34 .. 0.90
   2 ?    1.5   0.0     0.056   2.5e+02       2      22 ..      44      64 ..      43      67 .] 0.85

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 2.4e-06
   PF08448.5  81 yelrllPlrdesGevigvlvisrDiTer 108
                 ++l+++  rd +G v+g ++i++DiT+r
  MMETSP1325-20131115|6184_1   5 VLLNATSRRDVEGSVVGMVGIGQDITAR 32 
                 67889999******************99 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.056
   PF08448.5  2 dslpdalavldpdgrvlyaNa 22
                d  +++++ +d+ g+v+ +N+
  MMETSP1325-20131115|6184_1 44 DTANAPIFGVDTKGKVTVWNK 64
                567899999********9998 PP

>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.1e-05      0.32      76     104 .]       3      31 ..       1      31 [. 0.92
   2 ?    1.6   0.0     0.073   3.3e+02       3      19 ..      49      65 ..      47      67 .] 0.83

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 7.1e-05
   PF13426.1  76 fpvevtvtpvrdedgevvgiivilrDite 104
                 + v++++t  rd +g+vvg ++i +Dit+
  MMETSP1325-20131115|6184_1   3 VEVLLNATSRRDVEGSVVGMVGIGQDITA 31 
                 56899**********************95 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.073
   PF13426.1  3 gilildpdgtilfaNea 19
                +i+ +d++g+++ +N+ 
  MMETSP1325-20131115|6184_1 49 PIFGVDTKGKVTVWNKC 65
                6888999*******985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 349.03
//
Query:       MMETSP1325-20131115|6185_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-19   66.9   0.0    8.7e-19   66.9   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   6.4e-23   8.7e-19     190     246 ..       2      57 ..       1      58 [] 0.96

  Alignments for each domain:
  == domain 1    score: 66.9 bits;  conditional E-value: 6.4e-23
  PF03028.10 190 LekkleklsegshadFRlfLtaepapklPiglLqnsikltnEpptGlkanllralss 246
                 Le kle +++  h+dFRl++t+ p++k+P+g+Lq+s+k+++Epp+Glk n++ ++s+
  MMETSP1325-20131115|6185_1   2 LEGKLEGMKN-PHKDFRLWMTTDPTDKFPLGILQKSLKVVTEPPDGLKLNMRSTYSK 57 
                 899*****96.********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.32s 00:00:00.61 Elapsed: 00:00:00.46
# Mc/sec: 302.15
//
Query:       MMETSP1325-20131115|6181_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-74  249.9   5.4    1.6e-74  249.7   3.7    1.0  1  PF10211.4  Axonemal dynein light chain
  ------ inclusion threshold ------
      0.021   15.1   1.8      0.036   14.3   1.3    1.3  1  PF09177.6  Syntaxin 6, N-terminal
      0.035   13.4   6.3       0.09   12.1   2.7    2.3  2  PF04977.10 Septum formation initiator
      0.035   14.1   2.2      0.063   13.3   1.5    1.4  1  PF13339.1  Apoptosis antagonizing transcription factor
       0.11   12.2   4.1       0.19   11.5   2.8    1.2  1  PF03938.9  Outer membrane protein (OmpH-like)
        0.2   11.1   5.0       0.33   10.4   3.5    1.4  1  PF05266.9  Protein of unknown function (DUF724)
       0.22    9.1   1.5       0.27    8.8   1.0    1.1  1  PF01496.14 V-type ATPase 116kDa subunit family
       0.46    9.9   7.0       0.91    8.9   4.4    1.7  2  PF01025.14 GrpE


Domain annotation for each model (and alignments):
>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  249.7   3.7   9.5e-78   1.6e-74       2     183 ..      39     220 ..      38     225 .. 0.98

  Alignments for each domain:
  == domain 1    score: 249.7 bits;  conditional E-value: 9.5e-78
   PF10211.4   2 edvLnsilpprefeekgqlwiqyvssapasreDvvelqekLderlqerqAretgicpiReeLysqcFdElIRqvtidcaeRGlLLlrvrdelrmtiaaYqtLyessvafglrkaleaeqgkselekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadeiaflkkqnqqlk 183
                 +d++ns+lppre++++  +w+qyvs + a+r Dv++lqe+Ld+rl erqAretgicp+Re+LysqcFdElIRqvt+d +eRGlL lrvrde++mti+aY+ Lyessv+fg+rk+l+aeqg++ele+ei+ le +k+eLe++v el++k+e  ekr +e+++ e kk+++ei+flk+q q+ +
  MMETSP1325-20131115|6181_1  39 DDMVNSMLPPREWTQESGTWMQYVSKDSATRLDVINLQEMLDKRLLERQARETGICPVREDLYSQCFDELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEATKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHQT 220
                 6899*****************************************************************************************************************************************************************************99865 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.3   2.1e-05     0.036       5      77 ..     125     203 ..     124     216 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.1e-05
   PF09177.6   5 evkeevqksidkleslyrsweelrsdst.....sskelkeltkeLenalesiewdledLeeavsvvekn.pekfglsee 77 
                  v++e++ +id+ + ly+s  +   +++        el++  + Le++ +++e+++ +L + v+v+ek  +e+  l+++
  MMETSP1325-20131115|6181_1 125 RVRDEIKMTIDAYKILYESSVTFGVRKQlqaeqGMAELESEIEGLEATKKELENQVLELRNKVEVSEKRgNERKTLEDK 203
                 5899*********999999999888888777778888888888899999999999999999999988874333244443 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.15   2.5e+02      48      64 ..      73      90 ..      66      98 .. 0.79
   2 ?   12.1   2.7   5.3e-05      0.09      15      58 ..     148     191 ..     144     209 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.15
  PF04977.10 48 kdLks..dedyieeqARse 64
                 +L+   d+  +e+qAR e
  MMETSP1325-20131115|6181_1 73 INLQEmlDKRLLERQAR-E 90
                5664477999*******.4 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 5.3e-05
  PF04977.10  15 gllalyqlkqeiaalqaelaklkaeneeLeaevkdLksdedyie 58 
                 g+++  q +q +a+l+ e++ l+a+++eLe++v +L++  +  e
  MMETSP1325-20131115|6181_1 148 GVRKQLQAEQGMAELESEIEGLEATKKELENQVLELRNKVEVSE 191
                 6778889999**************************86555444 PP

>> PF13339.1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.5   3.7e-05     0.063      45     104 ..     156     221 ..     134     233 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.7e-05
   PF13339.1  45 kegneelqealksaekalkklldtlleLreaLleedkksseeeesesakkrkr.......aktekts 104
                  +g +el+++++ +e++ k+l +++leLr++   ++ k+ +e ++ + kkrk        + +++t+
  MMETSP1325-20131115|6181_1 156 EQGMAELESEIEGLEATKKELENQVLELRNKVEVSE-KRGNERKTLEDKKRKEeidflkyQGQHQTR 221
                 26789****************************333.333333333333444444444443333333 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.8   0.00011      0.19      21     104 ..     133     223 ..     131     238 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00011
   PF03938.9  21 vvdvqkvlkaspkykelqaklqee..akekqqe...lqakkkelqkeqknlqsera..qlsaeaekakeeelqakeqelqayaqqlqaelq 104
                 ++d  k+l +s  +  ++++lq+e  ++e+++e   l+a+kkel++++ +l+ + +    + +++k+ e +  ++e ++ +y+ q q + +
  MMETSP1325-20131115|6181_1 133 TIDAYKILYESSVTFGVRKQLQAEqgMAELESEiegLEATKKELENQVLELRNKVEvsEKRGNERKTLEDKKRKEEIDFLKYQGQHQTRSS 223
                 588999999999999999****9977556666655599**************9955557778889999999999999*****999997654 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.5   0.00019      0.33     110     187 ..     150     223 ..     142     226 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00019
   PF05266.9 110 eerkklekeiaekeieqqeleseiaelerkilelrrkeallkekkeaedkeiarlkseasklkqeledveleFqstaa 187
                 +++ ++e+ +ae e e + le+ ++ele+++lelr k + ++ek+ +e k ++  k    k +  + + + ++q+  +
  MMETSP1325-20131115|6181_1 150 RKQLQAEQGMAELESEIEGLEATKKELENQVLELRNK-VEVSEKRGNERKTLEDKKR---KEEIDFLKYQGQHQTRSS 223
                 56778999***************************96.6666666666655554333...223334444455555555 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   1.0   0.00016      0.27      67     124 ..     150     208 ..     122     242 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00016
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX. CS
  PF01496.14  67 kevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenk.veelre 124
                 ++ ++ e+ + ele+e++ +e+++++Le++++el ++ +v +++ ++ +  + ++  +e
  MMETSP1325-20131115|6181_1 150 RKQLQAEQGMAELESEIEGLEATKKELENQVLELRNKVEVSEKRGNERKTLEdKKRKEE 208
                 46678889999*****************************9998777666432122222 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.82   1.4e+03      51      73 ..      28      50 ..      19      92 .. 0.71
   2 ?    8.9   4.4   0.00053      0.91       7      62 ..     152     207 ..     148     214 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.82
  PF01025.14 51 kekeeakkyaiekflkelLpvlD 73
                 +ke+a + a ++++ ++Lp+ +
  MMETSP1325-20131115|6181_1 28 ARKEAATNPALDDMVNSMLPPRE 50
                56788888888888888888765 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00053
  PF01025.14   7 eeeeedeeeeleeeleeleeevkelkdkllrllaefenlrkrtekekeeakkyaie 62 
                 + ++e+  +ele+e+e le+  kel++++l+l++++e  +kr +++k    k+ +e
  MMETSP1325-20131115|6181_1 152 QLQAEQGMAELESEIEGLEATKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKE 207
                 567888899*********************99999998888887666644333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1117  (0.0816998); expected 273.4 (0.02)
Passed bias filter:                      671  (0.0490784); expected 273.4 (0.02)
Passed Vit filter:                       100  (0.00731422); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.52
# Mc/sec: 1235.05
//
Query:       MMETSP1325-20131115|6187_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-10   39.9   0.3     0.0029   17.3   0.0    3.8  4  PF13516.1 Leucine Rich repeat
  ------ inclusion threshold ------
      0.014   14.4   0.7      0.014   14.4   0.5    1.1  1  PF04476.8 Protein of unknown function (DUF556)
       0.62    9.8   4.5       0.62    9.8   0.3    2.3  2  PF09221.5 Bacteriocin class IId cyclical uberolysin-like


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.27   1.3e+03      16      23 ..       2       9 ..       1      10 [. 0.87
   2 !   11.6   0.0   4.6e-05      0.21       3      23 ..      13      33 ..      11      34 .. 0.90
   3 !    6.1   0.0    0.0027        12      11      23 ..      45      58 ..      44      59 .. 0.80
   4 !   17.3   0.0   6.3e-07    0.0029       1      23 [.      60      82 ..      60      83 .. 0.95

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.27
   PF13516.1 16 deGlsaLa 23
                d G++aLa
  MMETSP1325-20131115|6187_1  2 DAGVQALA 9 
                89*****8 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 4.6e-05
   PF13516.1  3 nLtsLdLsnNqigdeGlsaLa 23
                 Lt++ L ++++gd G++aLa
  MMETSP1325-20131115|6187_1 13 GLTEIGLMGTKVGDAGVQALA 33
                599999**************8 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.0027
   PF13516.1 11 nN.qigdeGlsaLa 23
                +N ++gd G++aL+
  MMETSP1325-20131115|6187_1 45 DNmKVGDAGVQALG 58
                55369*******97 PP

  == domain 4    score: 17.3 bits;  conditional E-value: 6.3e-07
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaLa 23
                + +Lt++ Ls++q+gd G++aLa
  MMETSP1325-20131115|6187_1 60 CGWLTVIALSDTQVGDAGVQALA 82
                789*******************8 PP

>> PF04476.8  Protein of unknown function (DUF556)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.5   3.2e-06     0.014      73     122 ..       4      54 ..       1      82 [. 0.72

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 3.2e-06
   PF04476.8  73 alGavvsGadyikvGlyGvknadeavevmkavvravkdidedkivv.aaGy 122
                  + a+ +      +Gl G+k  d +v+ + + vr v d ++d++ v  aG 
  MMETSP1325-20131115|6187_1   4 GVQALAACGGLTEIGLMGTKVGDAGVQALAGCVRRVDDDSSDNMKVgDAGV 54 
                 56667777778899**********************998776654414554 PP

>> PF09221.5  Bacteriocin class IId cyclical uberolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.3     0.048   2.2e+02      20      41 ..      10      31 ..       2      39 .. 0.50
   2 ?    9.8   0.3   0.00014      0.62      34      65 ..      49      80 ..      47      84 .] 0.80

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.048
                ----HHHHHHHHHH------HH CS
   PF09221.5 20 agstvvtiisiltailsgGvsa 41
                a + ++ i ++ t ++ +Gv+a
  MMETSP1325-20131115|6187_1 10 ACGGLTEIGLMGTKVGDAGVQA 31
                3333444444444455555555 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00014
                ------HHHHH-----HHHHHHHHHHH---HH CS
   PF09221.5 34 ilsgGvsallaiGwsafkatvkkkvakkgkaa 65
                ++ +Gv+al a Gw +++a+   +v   g +a
  MMETSP1325-20131115|6187_1 49 VGDAGVQALGACGWLTVIALSDTQVGDAGVQA 80
                66789999999999999999888887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 379.80
//
Query:       MMETSP1325-20131115|6188_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 298.32
//
Query:       MMETSP1325-20131115|6189_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00078   19.3   0.2    0.00091   19.1   0.1    1.2  1  PF00622.23 SPRY domain


Domain annotation for each model (and alignments):
>> PF00622.23  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   6.6e-08   0.00091       2      27 ..      32      57 ..      31      88 .. 0.75

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 6.6e-08
                --EEEEEE-TT-S-..EEE--EETTS CS
  PF00622.23  2 gkhyfevevddggeshirvGwatkea 27
                g+hy+ev+vd+ + +++++G+a+ + 
  MMETSP1325-20131115|6189_1 32 GIHYWEVTVDKCNHGSMYIGVARGDG 57
                89*********99999*******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 449.32
//
Query:       MMETSP1325-20131115|6190_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      518  (0.0378877); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 452.14
//
Query:       MMETSP1325-20131115|6193_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   13.9   0.0      0.033   13.3   0.0    1.3  1  PF06200.9 tify domain


Domain annotation for each model (and alignments):
>> PF06200.9  tify domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.4e-06     0.033      14      32 ..       5      23 ..       4      23 .. 0.95

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.4e-06
   PF06200.9 14 GqVlVFddvppeKAqeimr 32
                GqV V+dd+ +++++ei++
  MMETSP1325-20131115|6193_1  5 GQVRVYDDINVARVKEIIH 23
                9****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|6191_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-13   49.5   0.0    1.7e-12   46.5   0.0    1.9  1  PF05147.8 Lanthionine synthetase C-like protein


Domain annotation for each model (and alignments):
>> PF05147.8  Lanthionine synthetase C-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   0.0   1.2e-16   1.7e-12     184     309 ..       9     156 ..       1     173 [. 0.80

  Alignments for each domain:
  == domain 1    score: 46.5 bits;  conditional E-value: 1.2e-16
   PF05147.8 184 tksekllelikkllkyelslkfkdsgnwpdsrnneelss.rvaWChGapGillal.....................lkaakalkeeelleeaeealeqvlk...kglllknpslCHGlsGnleillllakltndekllelanklaekllsy 309
                 + + +++  i  +l+ + s++f+ sgn+p  + ne   + +v+W hGapG+l  l                     +++a +   ee+ ++++ a   + +    gl  k+ +lCHG+sGn ++ l + k+t + k+l++a ++ +++ s+
  MMETSP1325-20131115|6191_1   9 LSNATTKATIMATLDHIVSKQFP-SGNFPAEYFNETE-DeLVQWDHGAPGVLGCLalaasvytqaepeaagrymssAELAADCTWEEVGQDSQFAKLPMTNartPGLVVKGLMLCHGISGNTYMQLIMHKATTNDKYLYRALQFQRFV-SQ 156
                 567788999999*********99.***9988887733.35***********999999*****************9966666666666666666655444443337889**********************************994444.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 986.74
//
Query:       MMETSP1325-20131115|6194_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|6197_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 469.87
//
Query:       MMETSP1325-20131115|6186_1  [L=536]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-28   99.2   0.1    3.2e-28   98.3   0.1    1.4  1  PF00009.22 Elongation factor Tu GTP binding domain
    8.8e-14   51.4   0.0    2.4e-13   50.0   0.0    1.8  1  PF03143.12 Elongation factor Tu C-terminal domain
      3e-07   30.3   1.9    4.7e-06   26.5   1.2    2.9  2  PF03144.20 Elongation factor Tu domain 2
    6.5e-05   22.3   0.1        2.2    7.6   0.0    3.4  3  PF10662.4  Ethanolamine utilisation - propanediol utilisation
    0.00019   21.3   0.0    0.00034   20.4   0.0    1.5  1  PF01926.18 50S ribosome-binding GTPase
     0.0029   17.2   0.0     0.0077   15.8   0.0    1.7  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
  ------ inclusion threshold ------
      0.071   12.2   0.1       0.27   10.2   0.0    2.0  2  PF02421.13 Ferrous iron transport protein B
      0.071   13.4   0.1       0.43   10.9   0.0    2.3  2  PF08477.8  Miro-like protein
       0.11   11.6   0.0        4.1    6.4   0.0    2.3  1  PF09439.5  Signal recognition particle receptor beta subunit
       0.11   11.9   0.2       0.42   10.0   0.0    2.0  2  PF13555.1  P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.3   0.1   2.4e-31   3.2e-28       5     186 ..      96     313 ..      93     315 .. 0.80

  Alignments for each domain:
  == domain 1    score: 98.3 bits;  conditional E-value: 2.4e-31
                 EEEEEESTT---HHHHHHHHHHCCCCEHHHHHHHC-..HHHCCHHHH---BBSSEEEEEE...................T...ESCEEEEEEE----GGGHHHHHHH..HHT-SEEEEEEETTS-S-HHHHHHHHHHHHTT--EEEEEE-TTST.CHHHHHHHHHHHHHH..................HHHCTTGCT......CGEEEEEE-STCCHHHHHHHHHHHHHS CS
  PF00009.22   5 nigiighvDhGKtTltdallykagaiskrgeeaegerlldklkeerergiTiksaaisle...................k..etkkrlinliDtPGHvdFskevirg..lrvlDgavlvvdaveGvepqTeevlrlakklgvkiivviNKiDrv.eaeleeiveelkekl..................lekylekge......eevpvvpgSalkgegidaLleaivell 186
                  +++ig+vD+GK+Tl++ l+ ++ +  + g  a  + ++ ++ +e+e+g T  +++  +                    +  e+++r i+liD  GH+++ k++  g    + D+a+lvv a+ Gv+  T+e++ +a +l+++i vv++K+D + +  l+ + ++l + l                                 + +pv+ +S+++g+g++ Ll+a++ +l
  MMETSP1325-20131115|6186_1  96 RVAMIGNVDSGKSTLIGVLTNATLDDGR-GL-A--RSTVLRHRHEQENGRTSAVTVEIMGykegkqvvpqarqhnqrwaEvvEESDRAITLIDLCGHEKYLKTTVFGltGMMPDMALLVVGANMGVQLMTREHISIACALQLPIAVVVTKVDICpQPVLKTTRQSLAKYLrqnrkmpypvkdmsqveaA-------AeavasdRVTPVFAISSVTGMGLE-LLKAFLAKL 313
                 6899****************88866555.33.2..33588899999999988877766667799*99999998877665277*************************444577*****************************************77777777777775557777777776665554432.......045555579**************9.777776655 PP

>> PF03143.12  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   1.8e-16   2.4e-13       2      96 ..     433     521 ..     432     522 .. 0.93

  Alignments for each domain:
  == domain 1    score: 50.0 bits;  conditional E-value: 1.8e-16
  PF03143.12   2 ikahtkfkAqvyvlnkptpikagYrpvlyvrTadvtgkivellkkldsekkefvkpGdnvkvevelik.piavekgkrFaiReggrTvavGvvtev 96 
                 ++a+++f+A v++l++ t+i++gY+pv+++  +++ ++++ +      +++e +++G++++v+++++  + ++  g  F +Reg+   ++G+vt++
  MMETSP1325-20131115|6186_1 433 PQAVRHFEAAVVILHHSTTISEGYQPVVHCGVVRQSASMEAI------HGTESLRTGQRAQVKFKFMYySEYLLPGATFLFREGR-AKGIGKVTKL 521
                 78999********************************66666......689****************9899************99.9*******97 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       0.7   9.6e+02      30      57 ..     191     218 ..     181     222 .. 0.83
   2 !   26.5   1.2   3.4e-09   4.7e-06       1      70 [.     350     418 ..     350     425 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.7
                 EEEEEEEEEEETTCEESEEECEE--EEE CS
  PF03144.20  30 eivtrvrsletfngdldeavaganaGvi 57 
                   +t+v +l  +++d+  +v gan Gv 
  MMETSP1325-20131115|6186_1 191 YLKTTVFGLTGMMPDMALLVVGANMGVQ 218
                 466999999999************9986 PP

  == domain 2    score: 26.5 bits;  conditional E-value: 3.4e-09
                 EEEEEEEEEE--EETTEEEEEETTTCTEEEEEEEEEEEEETTCEESEEECEE--EEEESSSGGGGGTT-- CS
  PF03144.20   1 GtvatgrvysGtlkkGdtvrilgndtskkeivtrvrsletfngdldeavaganaGvivaikgledaiikG 70 
                 G v +g++ +G++k+++t+ +++ ++ +    ++vrs+et +  ++e+ ag+ a + v++ g   a+++G
  MMETSP1325-20131115|6186_1 350 GIVLGGTLTRGKVKVNQTLLVGPDRV-GGFLPVTVRSIETKRVGVQEVHAGQSATFAVRVLGRRPALRRG 418
                 67999****************99666.444*******************************999888888 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0021       2.9       3      26 ..      96     119 ..      94     123 .. 0.89
   2 ?    3.3   0.0     0.034        47      83     115 ..     226     257 ..     180     260 .. 0.75
   3 !    7.6   0.0    0.0016       2.2     103     142 ..     272     311 ..     267     312 .. 0.93

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0021
   PF10662.4   3 killiGkvgaGKTtLtqalkgeel 26 
                 ++ +iG+v++GK tL   l++ +l
  MMETSP1325-20131115|6186_1  96 RVAMIGNVDSGKSTLIGVLTNATL 119
                 799*************99998776 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.034
   PF10662.4  83 gfaslfnkpviGiiTkidlaedeenielveelL 115
                 ++a+ ++ p+  ++Tk+d++  +  ++++++ L
  MMETSP1325-20131115|6186_1 226 SIACALQLPIAVVVTKVDIC-PQPVLKTTRQSL 257
                 467888999999********.677777777776 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0016
   PF10662.4 103 edeenielveelLkaaGaekifevsavekegieellkyle 142
                 +d++++e++ e + +  ++ +f +s+v+  g+e l+++l+
  MMETSP1325-20131115|6186_1 272 KDMSQVEAAAEAVASDRVTPVFAISSVTGMGLELLKAFLA 311
                 6899*******************************99886 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   2.5e-07   0.00034       1      88 [.      96     186 ..      96     269 .. 0.56

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 2.5e-07
                 EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE...ETTE..EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETT CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev...kkek..iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdas 88 
                 +va++G+  +GKStLi  Lt++      d  g  r+++ ++    ++++   + v + G  eg++   +  + ++ +++v e++d ++ ++d+ 
  MMETSP1325-20131115|6186_1  96 RVAMIGNVDSGKSTLIGVLTNA---TLDDGRGLARSTVLRHRheqENGRtsAVTVEIMGYKEGKQVVPQARQHNQRWAEVvEESDRAITLIDLC 186
                 699*****************63...444444444444333321111112333455555533332222222233333333335555555555522 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   5.6e-06    0.0077       2      32 ..      96     126 ..      95     144 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 5.6e-06
                 EEEEE-------HHHHHHHHHHHHH------ CS
   PF03205.9   2 ivavvGpkdsGKTtlieklvnklkergyrva 32 
                 +va++G+ dsGK+tli  l n  +++g+  a
  MMETSP1325-20131115|6186_1  96 RVAMIGNVDSGKSTLIGVLTNATLDDGRGLA 126
                 799********************99998665 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0    0.0002      0.27       2      24 ..      96     118 ..      95     123 .. 0.91
   2 ?   -2.6   0.0       1.8   2.4e+03     136     163 ..     290     317 ..     275     326 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0002
                 EEEEE--TT---HHHHHHH---- CS
  PF02421.13   2 tvalvGnpnvGKttlfnaltgak 24 
                 +va++Gn ++GK+tl+  lt+a+
  MMETSP1325-20131115|6186_1  96 RVAMIGNVDSGKSTLIGVLTNAT 118
                 79******************986 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.8
                 --EEEEBCCGTB--HHHHHHHHHHCTCG CS
  PF02421.13 136 vpvvktvarkkkgieelleaiievaeke 163
                 +pv+++++ ++ g+e l++ ++++++++
  MMETSP1325-20131115|6186_1 290 TPVFAISSVTGMGLELLKAFLAKLQRNR 317
                 6899999999999999988887766654 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00032      0.43       1      87 [.      96     189 ..      96     243 .. 0.66
   2 ?   -0.3   0.0      0.96   1.3e+03      31     104 ..     247     318 ..     218     325 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00032
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefp..........kkklpeeikgdtlavktlevdvdtel.lelwdlggreelkkehelllkkadaillvydltdee 87 
                 +v+ +G+ ++GKs+l+  l+  + +               e+ +g t av+ +++  ++++ + +    ++ + ++    +++++d ++ ++dl+ +e
  MMETSP1325-20131115|6186_1  96 RVAMIGNVDSGKSTLIGVLTNATLDdgrglarstvLRHRHEQENGRTSAVTVEIMGYKEGKqV-V---PQARQHNQRWAEVVEESDRAITLIDLCGHE 189
                 7999***************99999888888877653333333344444444444444444421.2...222222222223577777777777766665 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.96
   PF08477.8  31 eeikgdtlavktlevdvdtel.lelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrk 104
                 +++ ++t ++  ++++ +++  + + d+++ e +++    +  ++   ++ +++ ++  le ++++la+l++ r+
  MMETSP1325-20131115|6186_1 247 QPVLKTTRQSLAKYLRQNRKMpYPVKDMSQVEAAAE---AVASDRVTPVFAISSVTGMGLELLKAFLAKLQRNRR 318
                 444445555555555556655666677777776666...356666666777777777777777777777777665 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.003       4.1      32      62 ..     161     191 ..      93     199 .. 0.69

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.003
                 ---SS-EEETT-...-----EEEE----GGG CS
   PF09439.5  32 vtSqessaalkvksekgkkltliDfPGhekl 62 
                 ++ q+++  ++v +e +  +tliD+ Ghek 
  MMETSP1325-20131115|6186_1 161 QARQHNQRWAEVVEESDRAITLIDLCGHEKY 191
                 3444444445556788888999999999885 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00031      0.42      23      40 ..      94     111 ..      78     119 .. 0.78
   2 ?   -1.9   0.0       1.6   2.2e+03      23      33 ..     364     374 ..     355     376 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00031
   PF13555.1  23 gkntlltGasGsGKSTll 40 
                 +  ++++G+  sGKSTl+
  MMETSP1325-20131115|6186_1  94 DVRVAMIGNVDSGKSTLI 111
                 445899***********9 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 1.6
   PF13555.1  23 gkntlltGasG 33 
                  ++tll+G+  
  MMETSP1325-20131115|6186_1 364 VNQTLLVGPDR 374
                 34699999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       559  (0.0408865); expected 273.4 (0.02)
Passed bias filter:                      424  (0.0310123); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.95u 0.39s 00:00:01.34 Elapsed: 00:00:00.70
# Mc/sec: 1834.92
//
Query:       MMETSP1325-20131115|6201_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|6195_1  [L=407]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-22   79.4   0.1    7.8e-22   77.4   0.0    2.0  2  PF01399.22 PCI domain
      2e-21   76.0   0.6    5.4e-21   74.6   0.4    1.7  1  PF08375.6  Proteasome regulatory subunit C-terminal
  ------ inclusion threshold ------
      0.082   12.4   0.0       0.16   11.5   0.0    1.4  1  PF01242.14 6-pyruvoyl tetrahydropterin synthase
       0.52   10.3   6.5       0.46   10.5   3.1    1.9  2  PF06741.8  LsmAD domain


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.92   3.1e+03      37      52 ..      97     113 ..      60     127 .. 0.57
   2 !   77.4   0.0   2.3e-25   7.8e-22       2     104 ..     203     305 ..     202     306 .. 0.97

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.92
                 X.------HHHHHHHHH CS
  PF01399.22  37 q.llesLekkvrerllr 52 
                   l + L +++ e++++
  MMETSP1325-20131115|6195_1  97 LlLRNLLSQNLVEQAYK 113
                 22233333444444443 PP

  == domain 2    score: 77.4 bits;  conditional E-value: 2.3e-25
                 XXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXX------HHHHHHHHHHHHHS-SEE-TTT----SSS-H.HHHHHHHHHHHH-------B-S----EE-- CS
  PF01399.22   2 sysdllkalrsgnlsgfseelkdleeelladdglsqllesLekkvrerllrqvskiyssislerlaklldlsv.devEkilvklIadgelrakidqpsgivvfk 104
                 +y  l++a+r g+l +f+ +++++ +  ++ d++++l+ +L ++v+++ lr++s +ys++s+e++ ++l+l++ + +E +++k+I+dg ++a id+++g +  k
  MMETSP1325-20131115|6195_1 203 PYLVLTQAVRAGDLLRFNDAVAEH-AATFKADKTYTLVIRLSHNVIKTGLRRISVSYSRVSMEDICTKLHLDSpQSAEFVCAKAIRDGVIDAVIDHENGWMTSK 305
                 7899********************.9***********************************************999***********************99876 PP

>> PF08375.6  Proteasome regulatory subunit C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.6   0.4   1.6e-24   5.4e-21       1      65 [.     309     374 ..     309     378 .. 0.90

  Alignments for each domain:
  == domain 1    score: 74.6 bits;  conditional E-value: 1.6e-24
   PF08375.6   1 DvYsTkePqqaFdeRIqfclqlHndavkAMRYpedkekkeeeka.eeerereelelelakelsegd 65 
                 +vY+T++Pq+aF++RI+fcl++Hn+av+AM Yp+ ++kk+++++ ++e+  ee+ +e+++el+e++
  MMETSP1325-20131115|6195_1 309 NVYATNDPQRAFHKRINFCLNVHNEAVRAMVYPPVSYKKKSDEKkDDEPTAEEIAKEIEAELAEEE 374
                 8*********************************99988876665889999999999999999886 PP

>> PF01242.14  6-pyruvoyl tetrahydropterin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.8e-05      0.16      49     116 ..     280     394 ..     272     400 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 4.8e-05
                 GGGGHHHHHH.HHHHTTT-EEETT-TTHHHHS............................................---HHHHHHHHHHHHHHHH..TT---EEEEEEEEEETTE CS
  PF01242.14  49 fkelkkilke.vleelDhkllneddpeleell............................................spTaEnlakliferlkekl..kekevklekvrvwEtpns 116
                 f  +k+i +  +++ +Dh++  ++ +el ++                                             +pTaE++ak i  +l+e+   ++++ +   v + E++++
  MMETSP1325-20131115|6195_1 280 FVCAKAIRDGvIDAVIDHENGWMTSKELSNVYatndpqrafhkrinfclnvhneavramvyppvsykkksdekkddEPTAEEIAKEIEAELAEEEwlDADRKRAGGVSIAEEQQQ 394
                 555666666756668999999889999998889999999999999999999999999999****************************999998777777777777887776665 PP

>> PF06741.8  LsmAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.9   6.4e+03       5      16 ..     190     201 ..     189     202 .. 0.84
   2 ?   10.5   3.1   0.00013      0.46      19      68 ..     349     396 ..     344     400 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.9
   PF06741.8   5 stFdeelYTtkL 16 
                 stF+ + Y t L
  MMETSP1325-20131115|6195_1 190 STFNQKEYRTAL 201
                 899999998876 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00013
   PF06741.8  19 skpeykekeakAerlArEIessktknihiaeergdleddsgvdeEdkysa 68 
                 s+ e k +e  Ae +A+EIe + +++  ++ +r++     ++ eE+  s+
  MMETSP1325-20131115|6195_1 349 SD-EKKDDEPTAEEIAKEIEAELAEEEWLDADRKR-AGGVSIAEEQQQSG 396
                 33.889999*************9999999999999.77777888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       643  (0.0470304); expected 273.4 (0.02)
Passed bias filter:                      439  (0.0321094); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.40s 00:00:01.16 Elapsed: 00:00:00.57
# Mc/sec: 1681.58
//
Query:       MMETSP1325-20131115|6202_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   21.7   0.1    0.00015   21.3   0.1    1.2  1  PF01329.14 Pterin 4 alpha carbinolamine dehydratase


Domain annotation for each model (and alignments):
>> PF01329.14  Pterin 4 alpha carbinolamine dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   1.1e-08   0.00015       6      46 ..      48      92 ..      44      93 .] 0.78

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 1.1e-08
                --TT-HHHHHHHT..TTSEE--.-.--EEEEEE-SSHHHH---HH CS
  PF01329.14  6 lseeeleellkel..pgWelee.e.kklerefkfkdfkealafvn 46
                +s+e+ +++ + l  +gW  +e e +++ ++f+f df ea+af++
  MMETSP1325-20131115|6202_1 48 ISDEDKASRWQGLtaSGWAQVEgErDAMAKTFTFGDFTEAWAFMS 92
                5666666777766447**6666457******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|6200_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-32  111.6   0.0    5.1e-17   61.5   0.0    2.3  2  PF00462.19 Glutaredoxin
    8.2e-06   25.5   0.2       0.15   11.8   0.0    2.8  2  PF04908.10 SH3-binding, glutamic acid-rich protein
    0.00015   21.6   0.0       0.35   10.8   0.0    2.2  2  PF03960.10 ArsC family
    0.00093   19.2   0.0       0.86    9.7   0.0    2.2  2  PF13417.1  Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   2.3e-16   7.9e-13       7      59 ..       5      57 ..       3      58 .. 0.97
   2 !   61.5   0.0   1.5e-20   5.1e-17       1      60 []     116     180 ..     116     180 .. 0.99

  Alignments for each domain:
  == domain 1    score: 48.0 bits;  conditional E-value: 2.3e-16
                STSHHHHHHHHHHHHTTHHEEEEETTTCHHHHHHHHHHHSSBSSSEEEETTEE CS
  PF00462.19  7 ptCpyCkkakrlLdelgvkyeeidvdedpeireelkelsgwrtvPqvfidgeh 59
                p+C++++++++lL+e ++++  +d+++d+e+r+ lk +s+w+t Pq+++ ge+
  MMETSP1325-20131115|6200_1  5 PRCKFSRQMVELLNEEKIPFGSFDILQDEEVRAGLKVYSDWQTYPQLYAQGEL 57
                89***********************************************9986 PP

  == domain 2    score: 61.5 bits;  conditional E-value: 1.5e-20
                 EEEEE-.....STSHHHHHHHHHHHHTTHHEEEEETTTCHHHHHHHHHHHSSBSSSEEEETTEEE CS
  PF00462.19   1 vvvftk.....ptCpyCkkakrlLdelgvkyeeidvdedpeireelkelsgwrtvPqvfidgehi 60 
                 v++f+k     p+C++++k++ lL+e +v ++ +d++ d+e+r+ lkel +w+t Pq+++dge++
  MMETSP1325-20131115|6200_1 116 VMLFMKgspdePRCGFSRKMVTLLKEERVGFDSFDILSDEEVRQRLKELFEWPTYPQLYVDGELV 180
                 89************************************************************987 PP

>> PF04908.10  SH3-binding, glutamic acid-rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   4.5e-05      0.15      21      98 ..      11      80 ..       3      81 .. 0.74
   2 !   10.8   0.0   9.4e-05      0.32      22      81 ..     134     184 ..     131     198 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.5e-05
                HHHHHHCTTTT---EEEETTT-HHHHHHHHHHS.-CCCS---TT--S-EEEETTEE---HHHH.HHHHCTT-HHHHHT- CS
  PF04908.10 21 qevlriLdakkiefdevDitkdeeerelmrenaapeekkpengkplPPqifnedeYcGDydaf.feakeentleefLkL 98
                ++++ +L+ +ki+f + Di +dee r  ++  +            + Pq++ + e +G  d   ++  ee+ l + L+L
  MMETSP1325-20131115|6200_1 11 RQMVELLNEEKIPFGSFDILQDEEVRAGLKVYS---------DWQTYPQLYAQGELLGGLDVVkDMQAEEESLAVQLGL 80
                46789*********************9988333.........4556678888888888777652455566666666665 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 9.4e-05
                 HHHHHCTTTT---EEEETTT-HHHHHHHHHHS.-CCCS---TT--S-EEEETTEE---HH CS
  PF04908.10  22 evlriLdakkiefdevDitkdeeerelmrenaapeekkpengkplPPqifnedeYcGDyd 81 
                 +++++L  +++ fd+ Di +dee r+ ++e           + p+ Pq++ + e +G  d
  MMETSP1325-20131115|6200_1 134 KMVTLLKEERVGFDSFDILSDEEVRQRLKELF---------EWPTYPQLYVDGELVGGLD 184
                 67899*********************999765.........3566666666666666655 PP

>> PF03960.10  ArsC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00047       1.6       3      32 ..       4      33 ..       3      43 .. 0.88
   2 !   10.8   0.0    0.0001      0.35       4      42 ..     127     165 ..     125     168 .. 0.94

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00047
                -TT-HHHHHHHHHHHHTT--EEEEETTTS- CS
  PF03960.10  3 spsCstcrkakawLeehgieyevidyletp 32
                +p+C+ +r++ ++L+e++i++   d+l+++
  MMETSP1325-20131115|6200_1  4 NPRCKFSRQMVELLNEEKIPFGSFDILQDE 33
                89********************99999876 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.0001
                 TT-HHHHHHHHHHHHTT--EEEEETTTS---HHHHHHHH CS
  PF03960.10   4 psCstcrkakawLeehgieyevidyletplskeeLkdil 42 
                 p+C+ +rk+ ++L+e+ + +   d+l+++  +++Lk+++
  MMETSP1325-20131115|6200_1 127 PRCGFSRKMVTLLKEERVGFDSFDILSDEEVRQRLKELF 165
                 89********************************99986 PP

>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0015         5       5      57 ..       5      58 ..       3      72 .. 0.83
   2 !    9.7   0.0   0.00025      0.86       5      63 ..     127     186 ..     125     191 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0015
                TTSHHHHHHHHHHHH----EEE----TTTT.HHHHHHH-TT--SSEEE----EE CS
   PF13417.1  5 pfSpyarkvrlaLeekglpyelvevtpgkk.rpellalnpkgkvPvLeddgevl 57
                p++ ++r +  +L+e ++p+   ++  ++  r+ l+  +  ++ P L+ +ge l
  MMETSP1325-20131115|6200_1  5 PRCKFSRQMVELLNEEKIPFGSFDILQDEEvRAGLKVYSDWQTYPQLYAQGELL 58
                89*******************999987766577787778888999888877755 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00025
                 TTSHHHHHHHHHHHH----EEE----TTTT.HHHHHHH-TT--SSEEE----EEESHHHH CS
   PF13417.1   5 pfSpyarkvrlaLeekglpyelvevtpgkk.rpellalnpkgkvPvLeddgevltdSlvI 63 
                 p++ ++rk+  +L+e ++ +   ++  ++  r++l++l    + P L+ dge + +  vI
  MMETSP1325-20131115|6200_1 127 PRCGFSRKMVTLLKEERVGFDSFDILSDEEvRQRLKELFEWPTYPQLYVDGELVGGLDVI 186
                 89**********************9877666*****************999977665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 972.92
//
Query:       MMETSP1325-20131115|6199_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-16   58.8   1.3    5.4e-16   58.5   0.9    1.1  1  PF00689.16 Cation transporting ATPase, C-terminus


Domain annotation for each model (and alignments):
>> PF00689.16  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.9     4e-20   5.4e-16      86     182 .]      41     142 ..      17     142 .. 0.88

  Alignments for each domain:
  == domain 1    score: 58.5 bits;  conditional E-value: 4e-20
  PF00689.16  86 s.......snfaqtaaFitlvlsqifnalnlrsrkeslfkfsgifsnkllllavllslllqvlivyvpglnavfgtaplsleewlialllalvvllvdelrkll 182
                 s       +++a+ta+ ++++++q+f a  +++r +s+++  g+  n+++ +++++ +++++  vy p++n++++t+pl +++wl  ++ a+v++++de+rk++
  MMETSP1325-20131115|6199_1  41 SrmsqreaLYMARTAFAVAVIICQLFAAVGVKTRWQSVIT-FGM-DNTYINFGIVIGCIVLAYGVYMPLMNDWIQTRPLRFTHWLPGIPWAFVIIAFDEVRKFV 142
                 14444456899**********************9999999.888.6********************************************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       560  (0.0409596); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1124.11
//
Query:       MMETSP1325-20131115|6204_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1    9.7   3.2        1.1    9.6   0.9    2.1  2  PF12752.2 SUZ domain


Domain annotation for each model (and alignments):
>> PF12752.2  SUZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.89   1.2e+04      21      38 ..      19      36 ..       9      39 .. 0.60
   2 ?    9.6   0.9   8.2e-05       1.1       6      26 ..     134     165 ..     131     183 .. 0.54

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 0.89
   PF12752.2 21 gssgssagakgakdrkak 38
                g+ g +aga+g   +++ 
  MMETSP1325-20131115|6204_1 19 GGAGMAAGAHGPAGQRHS 36
                445566666666555554 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 8.2e-05
   PF12752.2   6 kIlrRPskasses.............ergssgss 26 
                 kI++RP++ s+ s                ++g s
  MMETSP1325-20131115|6204_1 134 KIMKRPNARSRVSppsgagagagaggA--RGGPS 165
                 9****7777777755544433344321..11111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.33s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 1250.27
//
Query:       MMETSP1325-20131115|6205_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 224.96
//
Query:       MMETSP1325-20131115|6206_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-35  121.0   0.2    4.5e-35  120.9   0.1    1.0  1  PF06966.7  Protein of unknown function (DUF1295)
    8.1e-06   25.8   0.1    8.6e-05   22.5   0.0    2.1  2  PF04140.9  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
    8.7e-06   25.4   0.1      1e-05   25.2   0.1    1.2  1  PF02544.11 3-oxo-5-alpha-steroid 4-dehydrogenase
    7.1e-05   22.7   0.6    0.00011   22.1   0.4    1.4  1  PF04191.8  Phospholipid methyltransferase
     0.0077   14.6   0.2      0.013   13.9   0.1    1.5  1  PF01222.12 Ergosterol biosynthesis ERG4/ERG24 family


Domain annotation for each model (and alignments):
>> PF06966.7  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.9   0.1   1.6e-38   4.5e-35     119     224 ..       2     110 ..       1     113 [] 0.90

  Alignments for each domain:
  == domain 1    score: 120.9 bits;  conditional E-value: 1.6e-38
   PF06966.7 119 aldviglalwlvgivlealaDqQlsafkkdpankgkvldsGLwrysRHPNYfgealiWwglflialealeglealai...agpllltlllvfvsgipllEkkalkkykd 224
                 a+dv+g  +wlvg+++e++aD+Q++afk+  an+ k++++GLw +sRHPNYfge+l+W+g+f+ al +++  + +++   a+p ++ +ll+ +sgipllEk a+k+ +d
  MMETSP1325-20131115|6206_1   2 ATDVVGGLMWLVGFLIEYVADAQKTAFKSVEANEKKFITTGLWAWSRHPNYFGEILLWCGIFVGALGTISASTEWLLlgaASPCFTIFLLTSLSGIPLLEKAAKKRWGD 110
                 5799*************************************************************999776666655132679*****************999998776 PP

>> PF04140.9  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   3.1e-08   8.6e-05      30      55 ..      33      58 ..      16      79 .. 0.85
   2 ?    1.4   0.0      0.12   3.2e+02      47      66 ..      84     103 ..      71     105 .. 0.85

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 3.1e-08
   PF04140.9 30 lpdhklvksglykylrHPnYllfvil 55
                +++ k +++gl+++ rHPnY++ ++l
  MMETSP1325-20131115|6206_1 33 ANEKKFITTGLWAWSRHPNYFGEILL 58
                578899***************97764 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.12
   PF04140.9  47 PnYllfvilelatllLlcna 66 
                 P +++f++ +l++++Ll +a
  MMETSP1325-20131115|6206_1  84 PCFTIFLLTSLSGIPLLEKA 103
                 88899999999999999887 PP

>> PF02544.11  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   3.8e-09     1e-05      43     102 ..       5      64 ..       2      95 .. 0.92

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 3.8e-09
  PF02544.11  43 llgivlfvlgmliniksdiiLrelrkegetkykiprgglFelvsapnyfgEilewigyal 102
                 ++g +++++g+li+  +d +    +  + ++ k  + gl+ +   pnyfgEil w+g ++
  MMETSP1325-20131115|6206_1   5 VVGGLMWLVGFLIEYVADAQKTAFKSVEANEKKFITTGLWAWSRHPNYFGEILLWCGIFV 64 
                 67889*********************999999999999******************9765 PP

>> PF04191.8  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.4   3.9e-08   0.00011       4      68 ..       5      64 ..       2     102 .. 0.72

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 3.9e-08
   PF04191.8  4 ilGlllillgivlvlssvealgkfgtflgdffgelsdelvtsGiYrvlrNPmyvgstlgflGlaL 68
                ++G l+ l+g+++ + +  +   f+ +       ++++ +t+G + ++r+P y+g +l++ G+ +
  MMETSP1325-20131115|6206_1  5 VVGGLMWLVGFLIEYVADAQKTAFKSV-----EANEKKFITTGLWAWSRHPNYFGEILLWCGIFV 64
                567777777777776666666666665.....245677**********************99865 PP

>> PF01222.12  Ergosterol biosynthesis ERG4/ERG24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   4.7e-06     0.013     346     371 ..      33      58 ..       4      69 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 4.7e-06
  PF01222.12 346 ktGskLlvsGWyglarkinYlgDwlq 371
                 ++ +k +++G ++ +r++nY+g++l+
  MMETSP1325-20131115|6206_1  33 ANEKKFITTGLWAWSRHPNYFGEILL 58 
                 57799*****************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 564.14
//
Query:       MMETSP1325-20131115|6209_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 521.56
//
Query:       MMETSP1325-20131115|6210_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|6203_1  [L=428]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.3e-30  103.5   0.2    6.9e-30  103.2   0.1    1.0  1  PF09735.4 Membrane-associated apoptosis protein


Domain annotation for each model (and alignments):
>> PF09735.4  Membrane-associated apoptosis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.2   0.1     5e-34   6.9e-30     801    1108 ..      36     344 ..      17     351 .. 0.82

  Alignments for each domain:
  == domain 1    score: 103.2 bits;  conditional E-value: 5e-34
   PF09735.4  801 ivfspalkafv.......ssppeelsfla.eefsDvkElralvellGpYGvklldeklmvhvasqvaelkklvvenkdvlealrssfdkpdrveallkrlsdvdtvlkrmiiiGqilsFrdllqealrevleekvpfllssiedlkenlp...eeddkkvilrikelasavGveckvDpalvaallaeksepeeeyknsclLlvfvavslptlaaketsaynielegfsNNiHClakainavvaalfrvsaeaniesrlkeflalassslLklgqetdksk....lraresvlllldqlveespyLtmdvLEscfPYtllRna 1108
                  +v+s+   afv       ss+++e s  + e++ D +E++ l+ ++G  G+++ld +l   ++s +  ++ +v++nkd l alr  + ++ + e +++ + d+d+++   + +G++++ rd+++ a ++  ++++pf+l + +   ++           +  +++++  a Gv +  D  l ++++  + e       ++ ++++ +++  t++++  + yn e++gf NN H +  a+nav++  +          + +ef+ +++s+lLkl    + ++      + ++ l++l+   ++ p   ++vLE  +PY  +  a
  MMETSP1325-20131115|6203_1   36 LVYSEMSDAFVkralplsSSRRVEPSAAPfENYLDRREVQQLSSIVGLHGIRILDASLVQYMSSHIDTMQAVVRKNKDKLLALRNTVVDG-KWEPVVEGMEDLDQLVASSVRVGNACACRDMVARATNDAAQTHIPFVLECAQAASRTTSlmaMPRAPPELHSVNRVWRACGVLSCGDVPLWNVVQPMQVE------EVWAMFPAAFAATFTSSKWRGARYNSEIDGFANNEHVMMYAMNAVFSCAPDA------VAASEEFIRISASVLLKLRLSDSFQQdkgmQDTIHAQLVFLEDFAKRCP-AERSVLEQYIPYSAIHAA 344 
                  55555555554222222256666555554599****************************************************999887.789********************************************9998876554332112223346689*********************9987777......79999****************************************9987776......344579**********98643322221232333344599*****99999.69**********988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.36s 00:00:01.12 Elapsed: 00:00:00.61
# Mc/sec: 1681.38
//
Query:       MMETSP1325-20131115|6212_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 517.61
//
Query:       MMETSP1325-20131115|6214_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1364.46
//
Query:       MMETSP1325-20131115|6218_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   12.4   1.4       0.18   12.1   1.0    1.4  1  PF05710.7 Coiled coil


Domain annotation for each model (and alignments):
>> PF05710.7  Coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.0   1.3e-05      0.18      43      84 ..       3      46 ..       1      66 [. 0.83

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.3e-05
   PF05710.7 43 gsslsllvgnavgGvgvgvgvdlgavaktvsglvggklg...GkG 84
                g+sl ++  +++ Gv+v+  +d g+ a+tv+g++g++     G+G
  MMETSP1325-20131115|6218_1  3 GGSLRFVLRVLAHGVKVTYTID-GGEAQTVPGTSGSPDAdadGGG 46
                5568899999************.99*********99887655333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|6217_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00023   21.1   0.0    0.00038   20.4   0.0    1.3  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.032   13.4   0.1        3.6    6.9   0.1    2.4  2  PF00036.27 EF hand
      0.044   11.1   2.2      0.053   10.8   1.5    1.0  1  PF03753.8  Human herpesvirus 6 immediate early protein
      0.054   13.2   0.1        4.1    7.4   0.1    2.3  2  PF13405.1  EF-hand domain
       0.14   11.7   0.3       0.35   10.4   0.1    1.7  2  PF13833.1  EF-hand domain pair
       0.16   11.6   2.1       0.28   10.8   0.4    1.9  2  PF02789.12 Cytosol aminopeptidase family, N-terminal domain


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   1.7e-07   0.00038       3      64 ..      73     137 ..      64     139 .. 0.94

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 1.7e-07
   PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgsels...deevrevldyifkelDkngdGvlsfeEflq 64 
                  ++F + D+d++g l + eL+ ++++  +e+    +e +  +++  + ++D++++  l+ +Ef +
  MMETSP1325-20131115|6217_1  73 AKIFASSDSDKSGGLVVGELVVAMNAVRTEMAvecEEITNAQAETAVFDFDLDRSKALDADEFTK 137
                 468***************************99999999999**********************87 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.012        27       3      24 ..      73      94 ..      71      99 .. 0.75
   2 ?    6.9   0.1    0.0016       3.6       8      25 ..     121     138 ..     115     142 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.012
                HHHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfke 24
                 ++F+  D D++G + + E++ 
  MMETSP1325-20131115|6217_1 73 AKIFASSDSDKSGGLVVGELVV 94
                689**********765555555 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0016
                 HHCTTTSSEBEHHHHHHH CS
  PF00036.27   8 efDkDgdGkIsfeEfkea 25 
                  fD D++  ++ +Ef ++
  MMETSP1325-20131115|6217_1 121 DFDLDRSKALDADEFTKL 138
                 69*************876 PP

>> PF03753.8  Human herpesvirus 6 immediate early protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.5   2.3e-05     0.053     638     744 ..       8     123 ..       3     152 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.3e-05
   PF03753.8 638 vtPskkdykrdkkkdistkrkvkkrta..............krktvsiktdkskkiksdslskdtnvivissesedeedddniikkkllkkkikselksekskesddctsednelnlsdyd 744
                  tP+ ++ k+ ++ +++ k+k ++++a               +  v +  d +kk++s + s+++  i+ ss+s++   +  ++++ ++         +e + e ++ t+ + e  + d+d
  MMETSP1325-20131115|6217_1   8 ETPTAEQEKSARVIQVAAKKKDERKVAkvrvaeqkvinsigSKIAVEVSLDMQKKLHSSQFSEACAKIFASSDSDKS--GGLVVGELVVAM---NAVRTEMAVECEEITNAQAETAVFDFD 123
                 589999999999999999999999999999999999999988888999999**********************9764..555565544432...235566666666666666666666665 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.04        92       4      27 ..      74      97 ..      72     102 .. 0.89
   2 ?    7.4   0.1    0.0018       4.1       9      24 ..     122     137 ..     118     144 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.04
                ---GCC-------B---HHHHHHH CS
   PF13405.1  4 eaFklfDkdgdGkidaeELrdaLr 27
                ++F   D d++G +   EL+ a++
  MMETSP1325-20131115|6217_1 74 KIFASSDSDKSGGLVVGELVVAMN 97
                578888*************99987 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0018
                 C-------B---HHHH CS
   PF13405.1   9 fDkdgdGkidaeELrd 24 
                 fD d++  +da+E+ +
  MMETSP1325-20131115|6217_1 122 FDLDRSKALDADEFTK 137
                 9999**********87 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.29   6.6e+02      27      51 ..      72      96 ..      69      98 .. 0.74
   2 ?   10.4   0.1   0.00015      0.35       9      51 ..      91     139 ..      83     142 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.29
   PF13833.1 27 vdilfrefDtdgdGkisfeEFcvll 51
                +  +f   D d++G +   E +v++
  MMETSP1325-20131115|6217_1 72 CAKIFASSDSDKSGGLVVGELVVAM 96
                66688889******98666666665 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00015
   PF13833.1   9 eLkralallglkg......lseeevdilfrefDtdgdGkisfeEFcvll 51 
                 eL  a++++++++      +++ ++++ +  fD+d++ +++ +EF +l 
  MMETSP1325-20131115|6217_1  91 ELVVAMNAVRTEMaveceeITNAQAETAVFDFDLDRSKALDADEFTKLS 139
                 88999988888889999****************************9875 PP

>> PF02789.12  Cytosol aminopeptidase family, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.4   0.00012      0.28      44     108 ..       9      73 ..       3      80 .. 0.77
   2 ?   -0.6   0.0      0.42   9.5e+02      13      44 ..     114     144 ..      93     156 .. 0.52

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00012
  PF02789.12  44 lpslggekakrvllvGLGkeeeltaealrkaagaaaralkklkvatvavelpegknsaevaeaaa 108
                 +p+ ++ek+ rv+ v   k++e + +++r a ++++++++++ + +v +++ + ++s+ + ea+a
  MMETSP1325-20131115|6217_1   9 TPTAEQEKSARVIQVAAKKKDERKVAKVRVAEQKVINSIGSKIAVEVSLDMQKKLHSSQFSEACA 73 
                 67788899*********************************666666666664444444444443 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.42
  PF02789.12  13 aa..ekldaaldgklsellkeggfsgkagevlll 44 
                  a  + +d +ld   s++l + +f+ k  ++l+l
  MMETSP1325-20131115|6217_1 114 QAetAVFDFDLDR--SKALDADEFT-KLSKILIL 144
                 2222333333333..5555555555.55555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       645  (0.0471767); expected 273.4 (0.02)
Passed bias filter:                      431  (0.0315243); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 1284.86
//
Query:       MMETSP1325-20131115|6219_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|6220_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        3.4    7.8   5.5        2.6    8.2   0.6    2.0  2  PF01890.11 Cobalamin synthesis G C-terminus


Domain annotation for each model (and alignments):
>> PF01890.11  Cobalamin synthesis G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.6   0.00019       2.6      84      96 ..       2      14 ..       1      28 [. 0.87
   2 ?    2.6   0.2      0.01   1.4e+02      78      92 ..      37      52 ..      30      64 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00019
  PF01890.11 84 kevGvpsVAEaaA 96
                +++G++sVAEaaA
  MMETSP1325-20131115|6220_1  2 ATIGAGSVAEAAA 14
                689*********9 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.01
  PF01890.11 78 pSev.vkkevGvpsVA 92
                pS +   +++G++sVA
  MMETSP1325-20131115|6220_1 37 PSTSaTSATIGAGSVA 52
                4443045677999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 327.67
//
Query:       MMETSP1325-20131115|6211_1  [L=526]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-63  212.3   0.6    1.1e-62  211.6   0.4    1.4  1  PF00112.18 Papain family cysteine protease
    1.5e-08   34.6   2.4    2.9e-08   33.7   1.7    1.5  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.6   0.4   1.7e-66   1.1e-62       1     219 [.     309     524 ..     309     525 .. 0.97

  Alignments for each domain:
  == domain 1    score: 211.6 bits;  conditional E-value: 1.7e-66
                 -TSB--CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-T.TTS-TT----HHHHHHHHHHC---BBTTTS---SSC-.S--CCCC--C.CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSST.CC-T..TG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEEE CS
  PF00112.18   1 lpesvDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCsk.eenegCnGGlmenafeyikknggivtekdypYkakeggkCkkkkkkekevakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyket.ecss..telnhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseavyp 219
                 lp+svDw    gavtp kdqg+CGsCW+ +a+g++eg+l++kt +kl+ lS+q+l+dCs  e n+ C+GGl  + ++++  +gg++te++ypY +++ g C++++++    a+i+gy +++ +  e+l++ala++gP+sv++da +++f +Y +G y++t +c+s  ++l+h+vl+vGy + +g+ky  vkNSW+++wG+ G+i+++++ n  cg++++++y+
  MMETSP1325-20131115|6211_1 309 LPDSVDWVAA-GAVTPPKDQGSCGSCWSYGATGTTEGQLFLKT-GKLTPLSQQNLMDCSWpEGNHACDGGLDFRGYRWMLAHGGLATEATYPYLNSD-GFCRFSSSEVG--ATITGYANLSGT-VEDLNDALATVGPISVSVDAAADSFYYYAGGLYTDTdNCKSgmDDLDHTVLAVGYTTVDGQKYTTVKNSWSDHWGDGGFIHVTQQDN-CCGVATQPSYV 524
                 69*******7.5*******************************.8***************999**********************************.79****99866..***********8.99**********************************999998899**************************************9976.*******9996 PP

>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   1.7   4.2e-12   2.9e-08       1      57 [.     225     280 ..     225     281 .. 0.99

  Alignments for each domain:
  == domain 1    score: 33.7 bits;  conditional E-value: 4.2e-12
   PF08246.7   1 FeswmdaygkkYrhsseinerfenFkeNlrqiqehNanknvtftlglNkfsDlsheE 57 
                 Fe+w +++gk Y+ ++e+ +r+  +    +++++ N +k  ++ l+ N+++D++ eE
  MMETSP1325-20131115|6211_1 225 FEAWAAKHGKAYEGDDEKFHRASLYHATEKYVNSMN-RKRLSYWLETNHMADWTAEE 280
                 9***********************************.*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.47s 00:00:01.19 Elapsed: 00:00:00.50
# Mc/sec: 2520.97
//
Query:       MMETSP1325-20131115|6222_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-12   47.1   0.0    2.4e-12   46.6   0.0    1.2  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.0   1.7e-16   2.4e-12       3      93 ..      39     125 ..      37     126 .. 0.88

  Alignments for each domain:
  == domain 1    score: 46.6 bits;  conditional E-value: 1.7e-16
                 B---CT-EEEEEEEEEE.---EEEETTTTTCEEEEECCT...TS.S-HHHHHHHTTSBCTEEEEEEEEGGGT-S-TTCCTTTS.TT-EEEEEEEE CS
  PF00254.23   3 kkakegdtVtvhyegkledgtvfdssysrakpfefkvGs...gq.vikgleeglegmkvGekrtltippelaYgekglaggkippnatlvfevel 93 
                 + +k+g++V ++ ++++ d t+fd+   ++kp+ fk G+   ++ v++gleeg+ gmkvG+kr+l++  +la    g+   k pp+  +v++vel
  MMETSP1325-20131115|6222_1  39 S-PKPGNIVGFNAVVTIGDATLFDTY--KDKPVAFKFGQrpfQNiVCEGLEEGVRGMKVGGKRKLIVNQDLAPP--GV---KLPPGVPIVYTVEL 125
                 4.99*************9********..***********555236999*********************99977..33...46899999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.45s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 708.26
//
Query:       MMETSP1325-20131115|6224_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.5   0.1       0.15   11.6   0.0    2.2  3  PF13833.1 EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0     0.042   5.7e+02       2      11 ..      10      19 ..       9      20 .. 0.63
   2 ?   11.6   0.0   1.1e-05      0.15       5      34 ..      25      54 ..      24      56 .. 0.91
   3 ?   -3.4   0.0      0.51     7e+03      31      38 ..      71      78 ..      68      79 .. 0.64

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.042
   PF13833.1  2 kGlItreeLk 11
                kG ++++eL+
  MMETSP1325-20131115|6224_1 10 KGAVSADELR 19
                6667777776 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 1.1e-05
   PF13833.1  5 ItreeLkralallglkglseeevdilfref 34
                ++ +e+k  +++++lkgl+++++  +++++
  MMETSP1325-20131115|6224_1 25 LSVDEFKLTMQTIKLKGLKKKDINSILKCL 54
                788*******999***************98 PP

  == domain 3    score: -3.4 bits;  conditional E-value: 0.51
   PF13833.1 31 frefDtdg 38
                ++++D++g
  MMETSP1325-20131115|6224_1 71 VHMLDLNG 78
                45667665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.48s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 420.49
//
Query:       MMETSP1325-20131115|6223_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 320.94
//
Query:       MMETSP1325-20131115|6225_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-13   49.6   2.0    3.2e-13   49.3   1.4    1.1  1  PF00520.26 Ion transport protein
     0.0097   14.2   0.3      0.012   13.9   0.2    1.1  1  PF08016.7  Polycystin cation channel


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   1.4   4.6e-17   3.2e-13     143     198 ..       1      60 [.       1      61 [. 0.97

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 4.6e-17
                 HH-XXXXXXXXXXXXXXXXXXXXXX.........XXXXXXXXXXXXXXXX.XXXXXXXXX CS
  PF00520.26 143 dtfgeafltlfrlmtgegwgdlmyatl....ragskigyiyfvifiilgsflllnlliav 198
                 d fg a++t+f+++tge+w+ +my++      ++ +i+y+yf++++++g+f+++nl++++
  MMETSP1325-20131115|6225_1   1 DDFGKACMTIFQVLTGENWNAVMYDCRraktPENAWIAYFYFLMLMLVGGFVVMNLFLGI 60 
                 789***************************99**************************98 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.2   1.7e-06     0.012     367     424 ..       2      66 ..       1      67 [. 0.84

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.7e-06
   PF08016.7 367 nlvksiltlfrlllgafsyt........elesgnrvLGpllfltlvflvifillnlflavindsye 424
                 ++ k+++t+f++l g+ +++        + +  n ++   +fl+l+++  f+++nlfl +++ ++e
  MMETSP1325-20131115|6225_1   2 DFGKACMTIFQVLTGE-NWNavmydcrrAKTPENAWIAYFYFLMLMLVGGFVVMNLFLGILLAEFE 66 
                 5778999998887765.555588888876668899**************************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       660  (0.0482738); expected 273.4 (0.02)
Passed bias filter:                      495  (0.0362054); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|6226_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 572.19
//
Query:       MMETSP1325-20131115|6231_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|6228_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0041   16.5   0.2     0.0077   15.6   0.1    1.4  1  PF02744.12 Galactose-1-phosphate uridyl transferase, C-terminal domain
  ------ inclusion threshold ------
      0.091   12.4   3.8      0.095   12.3   0.0    2.6  3  PF04822.8  Takusan
        2.1    8.1   7.1          2    8.1   1.4    2.9  2  PF02185.11 Hr1 repeat


Domain annotation for each model (and alignments):
>> PF02744.12  Galactose-1-phosphate uridyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   1.7e-06    0.0077      66     122 ..     232     289 ..     204     294 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.7e-06
  PF02744.12  66 eladkekedlaaivkkiarrrdnlfe.....tsfeyslGihqaplnaeednswfHaHfevpl 122
                 e+    k+ l   +++i++ rd  +e      + +ysl   +apl+a +  + +H H+   l
  MMETSP1325-20131115|6228_1 232 EM----KRHLEKDITNIMIGRDMEYEasgssRDDPYSLSTTHAPLSARARTHTLHLHVATAL 289
                 33....455666679999********99988899***********************98765 PP

>> PF04822.8  Takusan
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.1e-05     0.095      19      51 ..      20      52 ..      12      66 .. 0.90
   2 ?   -0.1   0.1      0.16   7.3e+02      12      30 ..     132     150 ..     127     180 .. 0.82
   3 ?   -2.0   0.0      0.59   2.7e+03      47      68 ..     206     227 ..     204     248 .. 0.56

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.1e-05
   PF04822.8 19 kelEeLklelrkitqeRnelrdiLdlytegsln 51
                +++E Lk++lr+  ++  elr+ L+ ++ g+l 
  MMETSP1325-20131115|6228_1 20 EKVEYLKEQLRLTDNKIGELRRQLKKAMSGELW 52
                799************************999875 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.16
   PF04822.8  12 tekekkikelEeLklelrk 30 
                 tek k+ k+l e+  e+++
  MMETSP1325-20131115|6228_1 132 TEKTKNNKKLLEINQEIQL 150
                 7888998999999999997 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 0.59
   PF04822.8  47 egslnyrlnpeyeqlksqkekv 68 
                 +g l  r +++y ++k  ke+ 
  MMETSP1325-20131115|6228_1 206 NGTLHVRAHFQYSKVKPIKERM 227
                 5566666666666666555443 PP

>> PF02185.11  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   1.4   0.00043         2      34      57 ..      21      44 ..       2      50 .. 0.53
   2 ?   -0.9   0.2      0.28   1.3e+03      29      43 ..     136     149 ..     129     151 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00043
                XXXXXXXXXXXXXXXXXXXXXXXX CS
  PF02185.11 34 vlqeaesklreseqkielLkeqLe 57
                +++   ++lr  ++ki +L+ qL+
  MMETSP1325-20131115|6228_1 21 KVEYLKEQLRLTDNKIGELRRQLK 44
                244555555555555555555555 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.28
                 XXXXXXXXXXXXXXX CS
  PF02185.11  29 tdkksvlqeaesklr 43 
                 +++k+ l e++++++
  MMETSP1325-20131115|6228_1 136 KNNKK-LLEINQEIQ 149
                 44444.555555553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       621  (0.0454213); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 1437.81
//
Query:       MMETSP1325-20131115|6230_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.085   11.5   9.0      0.089   11.5   6.3    1.0  1  PF07946.9  Protein of unknown function (DUF1682)
        1.8    7.3  10.0          2    7.1   6.9    1.0  1  PF14362.1  Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF07946.9  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   6.3   1.3e-05     0.089     251     312 ..       8      66 ..       2      70 .] 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.3e-05
   PF07946.9 251 elreevlkkvkklReevekkllkakeeerqEeaqekkeekkkeereaklaklsaeeqrKlee 312
                 +l+++ ++ + ++R+e+e+  +ka e++++ +a+++ +e+++ ++e+ +++   eeqr   +
  MMETSP1325-20131115|6230_1   8 NLSKDPREVAANARAEAEEAKVKALEAQQEAAAAARVAEAERVRQEEARRA---EEQRLAAQ 66 
                 799999******************999999989888888888888885554...88876655 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   6.9   0.00029         2     177     236 ..       3      62 ..       1      69 [. 0.70

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00029
   PF14362.1 177 vaGkGpvykekkealdaaqaeletlkaqldaaqaeleankrkaaleeeraakvaeeqaan 236
                 +aG+G  +k  +e  ++a+ae e++k +  +aq+e+ a++r a+ e+ r+++++++++++
  MMETSP1325-20131115|6230_1   3 DAGCGNLSKDPREVAANARAEAEEAKVKALEAQQEAAAAARVAEAERVRQEEARRAEEQR 62 
                 689999999999999999988888888877777777777666666666666655555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1357  (0.0992539); expected 273.4 (0.02)
Passed bias filter:                      632  (0.0462259); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.48s 00:00:00.88 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|6232_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.026   14.4   0.5      0.043   13.7   0.4    1.3  1  PF10774.4 Domain of unknown function (DUF4226)
      0.079   12.3   0.1      0.095   12.0   0.1    1.2  1  PF12869.2 tRNA_anti-like


Domain annotation for each model (and alignments):
>> PF10774.4  Domain of unknown function (DUF4226)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.4   6.3e-06     0.043      20      64 ..      50      94 ..      46      98 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 6.3e-06
   PF10774.4 20 qhsalseadrqlveallsAhasavegrrrLdaiqqeieeavakqa 64
                + sa+ e+++q   a+++Ah++++  +++L   q+ +++a++k+ 
  MMETSP1325-20131115|6232_1 50 KDSAIVELEKQKKRAMRKAHEALATLAEQLGPTQEVVKAAIDKRC 94
                679999***********************************9986 PP

>> PF12869.2  tRNA_anti-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.4e-05     0.095      60      98 ..      26      64 ..       5      75 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.4e-05
   PF12869.2 60 aadqkYlgkiieVeGtvseikkgeadnyvvlartqsgka 98
                +a+q+Yl  +i V G+v+++   ++d+ +v +++q++ a
  MMETSP1325-20131115|6232_1 26 SAEQTYLAIVIGVYGSVENVPNVNKDSAIVELEKQKKRA 64
                799*****************************9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1025  (0.0749707); expected 273.4 (0.02)
Passed bias filter:                      812  (0.0593915); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 484.06
//
Query:       MMETSP1325-20131115|6227_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-44  151.1   4.8    1.7e-44  150.5   3.3    1.2  1  PF01283.14 Ribosomal protein S26e


Domain annotation for each model (and alignments):
>> PF01283.14  Ribosomal protein S26e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.5   3.3   1.3e-48   1.7e-44       1     103 [.       1     103 [.       1     112 [. 0.97

  Alignments for each domain:
  == domain 1    score: 150.5 bits;  conditional E-value: 1.3e-48
                 -----S-------------EEE-S----EEETTTSEE--EEE-SS-HHHHHHHHHSB-S-------EEE--EE-HHHHHHTTSS----TGGGG---------- CS
  PF01283.14   1 mtkKRrnnGrskknrGhvkvvrCtncgrlvpkdkaikrfvvrniveaaaardlseasvyeeyalpklyvklqYcvscaihskivrvrskeeRkkrtppkrark 103
                 mt+KRr++Gr+kk+rGhvk+vrC ++g+++pkdka++rf vrniv+a+++rd+++as+ye+yalpkly+k++Yc+++a+h++ivr rs+e+R++r+pp r++ 
  MMETSP1325-20131115|6227_1   1 MTVKRRSHGRNKKGRGHVKRVRCASTGKAIPKDKAVTRFIVRNIVDASSMRDIRDASAYEAYALPKLYIKQYYCIEAAVHQRIVRSRSAENRRNREPPARFQX 103
                 9*************************************************************************************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1507.71
//
Query:       MMETSP1325-20131115|6233_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.079   12.7   0.0       0.26   11.0   0.0    1.8  2  PF02824.16 TGS domain


Domain annotation for each model (and alignments):
>> PF02824.16  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.9e-05      0.26      22      59 ..      24      69 ..       3      70 .. 0.78
   2 ?   -1.3   0.0      0.14   1.9e+03      46      60 .]     106     120 ..     103     120 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.9e-05
                HHHHH-S--GGG--.EEEETS.......SEE-SSS---TTEEEEEE CS
  PF02824.16 22 fAykIhrslakkfi.yAlVnG.......qrvglshvLedgDvVeIv 59
                 A+ ++r+la ++  +++ ++       qrvgl  ++++ D+Ve++
  MMETSP1325-20131115|6233_1 24 EANDVSRDLAARLPeAVRLWDpaddvieQRVGLRFEIREPDTVELF 69
                499999999999962568999**********************986 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.14
                 SSS---TTEEEEEES CS
  PF02824.16  46 lshvLedgDvVeIvt 60 
                 + +vL ++ +++I++
  MMETSP1325-20131115|6233_1 106 MFRVLYNDGKIRIIK 120
                 567899999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 724.35
//
Query:       MMETSP1325-20131115|6234_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 737.70
//
Query:       MMETSP1325-20131115|6238_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.15   11.7   1.3       0.19   11.3   0.8    1.3  1  PF02330.11 Mitochondrial glycoprotein


Domain annotation for each model (and alignments):
>> PF02330.11  Mitochondrial glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.8   1.4e-05      0.19      51      82 ..      39      69 ..      25      71 .] 0.81

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.4e-05
                EEEECCCH------------------------ CS
  PF02330.11 51 vtfnvnqsvtlpydgeedesefeeqeeeqtse 82
                v+ +vn++ +++yd+e +ese e++ee + s 
  MMETSP1325-20131115|6238_1 39 VVPDVNNEYGTAYDDEAEESE-EDEEETGKSH 69
                888******************.6666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 315.08
//
Query:       MMETSP1325-20131115|6235_1  [L=372]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-88  297.2   1.1    1.7e-88  297.0   0.8    1.0  1  PF10255.4  RNA polymerase I-associated factor PAF67
    0.00075   18.8   0.0     0.0019   17.6   0.0    1.7  1  PF00515.23 Tetratricopeptide repeat
     0.0021   17.7   0.1       0.01   15.5   0.0    2.2  2  PF07719.12 Tetratricopeptide repeat
     0.0054   16.2   0.0      0.017   14.6   0.0    1.8  1  PF13414.1  TPR repeat
  ------ inclusion threshold ------
      0.058   13.2   0.5       0.66    9.8   0.0    2.5  2  PF13424.1  Tetratricopeptide repeat
      0.063   13.6   0.2        1.1    9.7   0.1    2.8  2  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF10255.4  RNA polymerase I-associated factor PAF67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  297.0   0.8   7.7e-92   1.7e-88      49     404 .]       2     364 ..       1     364 [. 0.94

  Alignments for each domain:
  == domain 1    score: 297.0 bits;  conditional E-value: 7.7e-92
   PF10255.4  49 ryrarlkkkteeelqelkkndqdvwsvesvlnvLeslvdkseikelleaekkg..eeesevadel...essslrkqlgYfsligllrvhvLlGdYyaalkvlenidlskka.lyskvaaayvsllyyvGfaylmlrrYkdAirvlsqillylaktk.qllssksyqqdaiaKkiekmyallaiclvlspqk.ldesisqqlkekysdkfeklqrg..dleafeelFskacPKfispvspldvkkeeenknkeplqrqlklFlkevkqqqklsklrsylkLYttikleklasllevddeelrsqllavksksrqlkkwksgasllsgelvsssdldfyidgdiihikekkvqkkygdiflrqinklk 404
                 +yr+ l+ ++ ee++ l++n + +w +++v  +L +l+  s++ ++l+++k++    +  +a e+     s+ +  lgYf++ g++r+++LlGdY+a+l vl +id++++   y kv+ ++ +l+y++Gfaylm+rrYkdAir +s+++ ++ +++ +   ++    d+ +K +++m allai  +++p   +d+ +++ +keky++++++l++g  + e +e+lF+kacPKfi p+  ++++++  n+ ++ +++q++ Flk+  + ++l k+rsylkLYt i+++kla +  ++d+++rs+lla+k+ ++q  + + g+ +l+g++ s  d+ f +++++ih++e    ++++ +f+ q+nk++
  MMETSP1325-20131115|6235_1   2 QYRTDLSARDAEEVELLQAN-KGAWATNKVAYYLDQLIRVSNVSNVLAQMKEAgiSTQRMNASEMgldTPSQATFDLGYFAIFGMARLECLLGDYHASLAVLAPIDVTSEHeRYHKVFSCHTNLYYHMGFAYLMMRRYKDAIRSFSTVIAFIYRMQkSGALQHVPGGDQGQKINDRMCALLAILISMTPGVkVDDMVLNIVKEKYGERIAQLESGnfNRELYENLFQKACPKFIVPS-IPNYDGPYINYSHDSVRQQVDAFLKQADHMSSLAKIRSYLKLYTAISVAKLARFNAISDDDFRSELLAIKHIMSQT-ESEPGMAALDGKTASALDIHFFVKDEMIHVDEADRVQRHEAFFMSQVNKCE 364
                 8*********99**999998.9**************************9999966444444555555777889999*******************************66666****************************************998835566777889*********************8766***********************888999****************.99**************************************************************************.888888****************************99999**********96 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   8.3e-07    0.0019       3      28 ..     124     149 ..     122     151 .. 0.92

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 8.3e-07
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekAL 28 
                  +y +G ayl + +y++A+  ++ ++
  MMETSP1325-20131115|6235_1 124 LYYHMGFAYLMMRRYKDAIRSFSTVI 149
                 6*********************9887 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.6   3.7e+03       5      21 ..      83      99 ..      80     102 .. 0.74
   2 !   15.5   0.0   4.4e-06      0.01       3      28 ..     124     149 ..     122     151 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.6
                HHHHHHHHHTT-HHHHH CS
  PF07719.12  5 ynlGlayyklgdyeeAl 21
                + ++++   lgdy   l
  MMETSP1325-20131115|6235_1 83 FGMARLECLLGDYHASL 99
                67888888999997665 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 4.4e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAl 28 
                 ++y +G ay+ +++y++A++ f  ++
  MMETSP1325-20131115|6235_1 124 LYYHMGFAYLMMRRYKDAIRSFSTVI 149
                 79*******************98876 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   7.5e-06     0.017      36      65 ..     121     149 ..     114     151 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7.5e-06
   PF13414.1  36 naelyynlAlaylklgkdyeeAledyekAl 65 
                 + +lyy ++ ayl++  +y++A++ ++ ++
  MMETSP1325-20131115|6235_1 121 HTNLYYHMGFAYLMMR-RYKDAIRSFSTVI 149
                 678************8.7******999887 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.23   5.2e+02      51      67 ..      84     100 ..      79     103 .. 0.51
   2 ?    9.8   0.0   0.00029      0.66       6      36 ..     123     154 ..     119     161 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.23
   PF13424.1  51 nlanlylalgdydeAle 67 
                  +a+l   lgdy ++l+
  MMETSP1325-20131115|6235_1  84 GMARLECLLGDYHASLA 100
                 44555555555554444 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00029
   PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalel.lr 36 
                 ++++ ++ +++++++y++A+  + ++++  +r
  MMETSP1325-20131115|6235_1 123 NLYYHMGFAYLMMRRYKDAIRSFSTVIAFiYR 154
                 689999*************9999988877555 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.47   1.1e+03       2      23 ..      81     102 ..      80     105 .. 0.86
   2 ?    9.7   0.1   0.00047       1.1       3      27 ..     125     149 ..     123     150 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.47
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   2 AlyklalsyyklgdtdeAleal 23 
                 A + +a++   lgd+ ++l++l
  MMETSP1325-20131115|6235_1  81 AIFGMARLECLLGDYHASLAVL 102
                 78999***99999**9999877 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00047
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   3 lyklalsyyklgdtdeAlealerli 27 
                 +y+++ +y+++ ++ +A++ +  +i
  MMETSP1325-20131115|6235_1 125 YYHMGFAYLMMRRYKDAIRSFSTVI 149
                 7*********99*********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.36s 00:00:01.08 Elapsed: 00:00:00.53
# Mc/sec: 1681.97
//
Query:       MMETSP1325-20131115|6239_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-12   44.2   0.1    9.7e-12   44.0   0.1    1.1  1  PF01423.17 LSM domain


Domain annotation for each model (and alignments):
>> PF01423.17  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.1   7.1e-16   9.7e-12       3      49 ..      40      86 ..      38      97 .] 0.83

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 7.1e-16
                HHHHTTS-EEEEETTTEEEE-EEEEEETTCEEEEEEEEEEE...EEE CS
  PF01423.17  3 lqelinkrVtvelkngreveGtLkafDkfmNlvLrdvtetwkrkkkn 49
                l e+++kr++v l++gr ++G++++fD+f N+vL+d++e+  ++  +
  MMETSP1325-20131115|6239_1 40 LVEQLDKRLLVVLRDGRHLVGVMRSFDQFSNMVLEDTHERNVSGGLK 86
                67899***********************************8776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|6240_1  [L=346]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-35  121.4   0.0      5e-35  120.9   0.0    1.1  1  PF00481.16 Protein phosphatase 2C
    4.4e-09   35.9   0.0    2.8e-07   30.0   0.0    2.5  1  PF13672.1  Protein phosphatase 2C
    0.00059   19.4   0.0     0.0014   18.2   0.0    1.6  2  PF07228.7  Stage II sporulation protein E (SpoIIE)


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.9   0.0   1.1e-38     5e-35      31     248 ..      81     311 ..      64     314 .. 0.89

  Alignments for each domain:
  == domain 1    score: 120.9 bits;  conditional E-value: 1.1e-38
                 CCHHCCCHCCCHHH..HHHHHHCHHHHHHHHHHHHHHTTXX.XXGGHCHHHHHH.HHCHHHHHHCCS..HTT---EEEEEEESSSEEEEEEE---EEEEEE---EE....EESS---STTSHHHHHHHHH----EE-T--EE---...............BSBSB----HHHC---ST-TSB---EEEEEEE-TT.--EEEEE----CCCCHHHHHHHHHHHHHHHHTHHHHHTS-SSHHH CS
  PF00481.16  31 kssvaffavfdghg..greaakyarehleeilkerksfleleklekalrksfladtdeelksseant.epsksGstavvalirgqklyvAnvGDSravLcrsdnak....keltedHkpsnedEreRIeeaggsvsngngRvngs...............LavsRalGdfelkpkekeqlvsaePdvtsvkidee.defliLasDGlwdvlsdqeavdlvrselskkkspmeaaeelvdea 248
                  s+  +++v+dghg  g+++++  +++ +++l   ++ l++  + kal +s  ++++++lk+   ++   + sG+t v+++irg+++   nvGDSr+  +++ ++      ++ted+kp+++ E+eRI +agg+v   +++  g                La++R+lGd+   +    + v++eP +t   +d+e + fl++asDGlw+ +sdq++++     + ++k+++ + +el++++
  MMETSP1325-20131115|6240_1  81 ASNSLLLCVMDGHGefGDKVSQDLKKNWPPLLFGHPDILTD--VPKALTESLNEAEQNMLKK---MAgNADFSGTTFVCVIIRGNEMWSGNVGDSRCTAGDRAEDGsfvfRTVTEDQKPDSPGEKERIIAAGGRVFA-VQYDDGIdgpqrvwlgnmdipgLAMARSLGDTIAHS----AGVISEPVITYEVLDPEkTAFLVIASDGLWEFMSDQDVISQTAAAVAEGKQLRPIVDELINTS 311
                 55666889999997668999999999999999999999988..9**********44555555...44458********************************999999****************************5.66666667778999999******************8....79***********************************************9**99999999876 PP

>> PF13672.1  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   6.1e-11   2.8e-07       8     196 ..      66     310 ..      60     319 .. 0.70

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 6.1e-11
   PF13672.1   8 kgkpcqDafaired.sdgwll.aVaDGaGsakrSdeGsrlaveaagealeelleeeeeqeeallrailneilaevklkaeaeaq..qeelkdyatTlllavitpgeivffqiGDgaivvrd..rdgev..qllgepdsgeyane.........ttfltsedaeeel...............................................rvrrlklepvdalllmTDGls.............nslrdeeafapllkellee 196
                  +k +qD++ ++ed ++ +ll  V DG+G  +++d+ s+ + ++    l  + +  +   +al ++++++ +         + +    +++  +tT+++++i+++e++++++GD+++ + d  +dg++  + ++e+++ +  +e                     +                                                ++ l+ e+   l++ +DGl+             +++++ ++++p+++el+++
  MMETSP1325-20131115|6240_1  66 PKKANQDSLVMWEDaASNSLLlCVMDGHG--EFGDKVSQDLKKNWPPLLFGHPDILTDVPKALTESLNEAEQ--------NMLKkmAGNADFSGTTFVCVIIRGNEMWSGNVGDSRCTAGDraEDGSFvfRTVTEDQKPDSPGEkeriiaaggR-----------VfavqyddgidgpqrvwlgnmdipglamarslgdtiahsagvisepviTYEVLDPEKTAFLVIASDGLWefmsdqdvisqtaAAVAEGKQLRPIVDELINT 310
                 57889****95555255566678*****9..58888777777777777777766555543333333332222........22221134777789***********************8877887888776779999997777774343444442...........22233444445567778888888888899999999999999******9999999***************66666666555555555555777777777665 PP

>> PF07228.7  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.1   5.1e+03      41      66 ..     127     154 ..     115     171 .. 0.55
   2 !   18.2   0.0     3e-07    0.0014     107     191 ..     250     331 ..     241     333 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1.1
                 HHHHHHHHHHG.GG----...TT--EEE CS
   PF07228.7  41 aevlerlnealarnleee..erfatavl 66 
                 +e l+++++ + ++++ +    ++t+v+
  MMETSP1325-20131115|6240_1 127 TESLNEAEQNMLKKMAGNadFSGTTFVC 154
                 4444444444444444444323333333 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 3e-07
                 --.--.----EEE------EEEEE-----S--HHHHHH....HHHHHT----------HHHHHHHHHHH..HCT----S-EEEEEEE CS
   PF07228.7 107 GilpeadyeeaelqlepgdllllyTDGvtEardpdgelfgkerllallaeaegesleelldalveelle..lgsgeleDDitllvlr 191
                 G+++e  ++ + l+ e+   l++++DG+ E +++++ +   + ++a++   eg++l  ++d+l+++  +  l+++e+ DD+t++v+ 
  MMETSP1325-20131115|6240_1 250 GVISEPVITYEVLDPEKTAFLVIASDGLWEFMSDQDVI--SQTAAAVA---EGKQLRPIVDELINTSNNlwLKEEEVIDDTTVCVAY 331
                 7888888888888999999*************888888..44444444...4667****************999**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.35s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1658.28
//
Query:       MMETSP1325-20131115|6236_1  [L=511]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-63  211.4   0.0    1.4e-62  210.9   0.0    1.2  1  PF00198.18 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
    2.6e-21   74.8   4.1    5.3e-12   45.0   0.1    3.1  3  PF02817.12 e3 binding domain
    8.4e-21   73.2   2.3    2.9e-20   71.5   1.6    2.0  1  PF00364.17 Biotin-requiring enzyme
    0.00026   20.4   0.3    0.00081   18.8   0.0    1.9  2  PF13533.1  Biotin-lipoyl like
  ------ inclusion threshold ------
      0.036   13.6   0.3      0.097   12.2   0.2    1.7  1  PF01597.14 Glycine cleavage H-protein
       0.11   11.5   0.5        3.9    6.4   0.1    2.2  2  PF12700.2  HlyD family secretion protein


Domain annotation for each model (and alignments):
>> PF00198.18  2-oxoacid dehydrogenases acyltransferase (catalytic domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.9   0.0   6.1e-66   1.4e-62       5     226 ..     290     505 ..     286     510 .. 0.96

  Alignments for each domain:
  == domain 1    score: 210.9 bits;  conditional E-value: 6.1e-66
                 XXXXXXXXXXXXXXX-----.---EEEEEEEEE-HHHHHHHHHHHHHHHH------HHHH---CCCHHHHH-GGGG-EE.EE-EEE--SS--E-EE--------EEEE--GGG-----HHHHHHHHHHHH------GGGT----SEE---------------------EE-----.B--TT.---------EEEEEEEEETTT--------HHHHHHHTT-HH CS
  PF00198.18   5 ervplsgirkaiakrlteskqtiPhftlsdevdvtallalrkklkedeakeekkltlldflikavalalkefPelnssvdeekeivlkksvnigiAvatpdGLlvPviknadkkslleiakelkdlaeraregklkpeeleggtftisNlGmlGvtsftPiinppqvaIlavgrikerpvv.kegeivirkvmtlslsaDHRvidGaeaarFlntlkellenp 226
                  +vp+sg+ ka+ak++++++  +P f +s+++  ++  al++klk +       +++ ++l+kava++l+++P++n+ +d  + i +++++n+++Ava++ GL++P i+++++++++ + +e+++l+++a++g+lkp+e++ gtf i+NlGm+Gv+sf +i++ +   Ila+g +k + v+ ++g + ++k mt+++++DHR i Ga+aa Fl++l +lle+ 
  MMETSP1325-20131115|6236_1 290 GTVPMSGMMKAVAKNMEATL-GTPIFRVSRTICTDKFDALYAKLKPKG------VSVSALLAKAVAMTLEKHPIVNAAYDPSGAIKYNDDINVAMAVALDGGLITPTIRKCNEMDIYTVGREWRELVNKAKDGSLKPDEYNSGTFAITNLGMFGVSSFEAILPAGMGSILAIGGTKPVVVAqENGFFGVEKQMTVTITCDHRHIYGADAALFLKDLGTLLEDE 505
                 579*****************.*************************85......9*************************999********************************************************************************************88888866667***********************************64 PP

>> PF02817.12  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.5   1.6e-13   3.6e-10       2      39 .]     158     195 ..     157     195 .. 0.93
   2 !   45.0   0.1   2.3e-15   5.3e-12       3      38 ..     213     248 ..     211     248 .. 0.95
   3 ?   -7.1   2.9         6   1.4e+04       6      11 ..     275     280 ..     272     284 .. 0.52

  Alignments for each domain:
  == domain 1    score: 39.1 bits;  conditional E-value: 1.6e-13
                 SSSBSHHHHHHHHHTT--GGG---------B-HHHHHH CS
  PF02817.12   2 rvfasPaaRkLAaekgidLsqvkGTGpgGRItkeDVea 39 
                 r+ as  a+k A+  g+dL+ v+GTGp+GRI+ eDV+a
  MMETSP1325-20131115|6236_1 158 RIVASGYAKKTAEATGVDLRVVAGTGPNGRIVSEDVKA 195
                 7788889*****************************86 PP

  == domain 2    score: 45.0 bits;  conditional E-value: 2.3e-15
                 SSBSHHHHHHHHHTT--GGG---------B-HHHHH CS
  PF02817.12   3 vfasPaaRkLAaekgidLsqvkGTGpgGRItkeDVe 38 
                 + a+P+a++LA+ kgid+  +kGTG  GR+t++DV+
  MMETSP1325-20131115|6236_1 213 IAATPMAKQLAKSKGIDVTTIKGTGNFGRVTEDDVL 248
                 789********************************7 PP

  == domain 3    score: -7.1 bits;  conditional E-value: 6
                 SHHHHH CS
  PF02817.12   6 sPaaRk 11 
                 +Paa  
  MMETSP1325-20131115|6236_1 275 APAAAT 280
                 555543 PP

>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5   1.6   1.3e-23   2.9e-20       1      72 [.      34     105 ..      34     107 .. 0.97

  Alignments for each domain:
  == domain 1    score: 71.5 bits;  conditional E-value: 1.3e-23
                 CEES-S----EEEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEESS-TT-EE----ECE CS
  PF00364.17   1 keiksPmiGesvkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdlla 72 
                 +ei++P+++++++eg++v++l++vGdkV+ag+++++ve++K+ m++ea ++G++++i  +eG+t  vg+ +a
  MMETSP1325-20131115|6236_1  34 TEITMPALSSTMTEGKIVQWLKSVGDKVEAGDAIMVVESDKADMDVEAFEEGYIAKIITDEGETAAVGSAVA 105
                 58******************************************************************9887 PP

>> PF13533.1  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   3.5e-07   0.00081      10      44 ..      47      81 ..      40      89 .. 0.86
   2 ?   -3.0   0.0       2.4   5.6e+03       6      14 ..     151     160 ..     151     161 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 3.5e-07
   PF13533.1 10 sGrVeevlVkeGqeVkkGDvLleldsekleaaleq 44
                 G+++++l + G+ V++GD +++++s+k   ++e+
  MMETSP1325-20131115|6236_1 47 EGKIVQWLKSVGDKVEAGDAIMVVESDKADMDVEA 81
                69************************997766665 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 2.4
   PF13533.1   6 appv.sGrVe 14 
                 a+pv sGr++
  MMETSP1325-20131115|6236_1 151 AAPVnSGRIV 160
                 578889**98 PP

>> PF01597.14  Glycine cleavage H-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   4.3e-05     0.097      32      73 ..      49      89 ..      28      99 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.3e-05
                -EEEE----------TT-B---EEESS-EE--B-S----EEE CS
  PF01597.14 32 dlvfvelpevgtevekgeslaavEsvKaasevyapvsGevve 73
                ++v   l+ vg++ve+g+++ +vEs Ka  +v a  +G + +
  MMETSP1325-20131115|6236_1 49 KIVQ-WLKSVGDKVEAGDAIMVVESDKADMDVEAFEEGYIAK 89
                4443.59*************************9999998865 PP

>> PF12700.2  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1    0.0017       3.9      26      57 ..      44      76 ..      39      80 .. 0.88
   2 ?    3.9   0.0    0.0098        22      22      57 ..      77     113 ..      73     121 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0017
   PF12700.2 26 aeesGyi.kylvkeGekVkkgqvlatldsseld 57
                + + G+i ++l + G+kV +g+ +++++s++ d
  MMETSP1325-20131115|6236_1 44 TMTEGKIvQWLKSVGDKVEAGDAIMVVESDKAD 76
                56789999********************99875 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.0098
   PF12700.2  22 evvsaeesGyi.kylvkeGekVkkgqvlatldsseld 57 
                  +v a e Gyi k+  +eGe  + g+ +a l ++e +
  MMETSP1325-20131115|6236_1  77 MDVEAFEEGYIaKIITDEGETAAVGSAVALLAETEDQ 113
                 5789999************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       583  (0.0426419); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.98u 0.34s 00:00:01.32 Elapsed: 00:00:00.56
# Mc/sec: 2148.31
//
Query:       MMETSP1325-20131115|6245_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 459.71
//
Query:       MMETSP1325-20131115|6241_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 1142.88
//
Query:       MMETSP1325-20131115|6246_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.31s 00:00:00.58 Elapsed: 00:00:00.43
# Mc/sec: 222.92
//
Query:       MMETSP1325-20131115|6242_1  [L=442]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-19   69.8   1.9    2.2e-19   69.7   0.2    1.8  2  PF04280.10 Tim44-like domain
  ------ inclusion threshold ------
          5    7.4   6.8         30    4.9   0.3    3.5  4  PF10404.4  Rad4 beta-hairpin domain 2


Domain annotation for each model (and alignments):
>> PF04280.10  Tim44-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.49   3.3e+03     108     128 ..     239     259 ..     233     264 .. 0.79
   2 !   69.7   0.2   3.3e-23   2.2e-19       2     145 ..     283     431 ..     282     432 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.49
  PF04280.10 108 asGevvegdedkvkevrevWt 128
                 a G+ ++  +d+ ++vre+W 
  MMETSP1325-20131115|6242_1 239 AAGDAKDRVNDRLEDVREAWE 259
                 667888888999999999996 PP

  == domain 2    score: 69.7 bits;  conditional E-value: 3.3e-23
  PF04280.10   2 asalaeikqadpsFdeeeFlegakeayep.ileafakgDletLrellteevyeelkaeikerakqgetleatl..vgireaelleakiegdeavvtvrfrtqqisvtddasGevvegdedkvkevrevWtfeRd..lgsedpnWrLvgi 145
                 a a++e+++adp+F+ e + +++ + + p +l a+ +gD++ L+++l e++++  +++i+ r+++++  +     v++ ++ +  a ie++++++ +    qqi+++++ +Ge+v+g ed+++  ++  +f+Rd  + ++  +W++v++
  MMETSP1325-20131115|6242_1 283 AMAVREFRRADPNFSLEVWEKEVSQDLLPeLLGAWLRGDMQFLKQWLLEDALKKVANDIRVRKEEKLLWDDHVlsVDFHQVIIDPALIENSTPMLGLYAAVQQINCIRNLDGEIVQGAEDNIQLNQYSLVFQRDydEVEGVLQWKVVEF 431
                 6799*********************99999********************************88886665554127788999****************************************************765555778999986 PP

>> PF10404.4  Rad4 beta-hairpin domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.3    0.0044        30      24      61 ..     125     163 ..     116     166 .. 0.85
   2 ?    4.1   0.1    0.0077        53      22      55 ..     165     197 ..     163     198 .. 0.65
   3 ?   -0.2   0.0      0.16   1.1e+03      29      48 ..     244     264 ..     239     309 .. 0.85
   4 ?   -3.6   0.0       1.9   1.3e+04      17      29 ..     330     342 ..     329     353 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0044
                 EE-..........-----.-------EEEEB-GGGEE-- CS
   PF10404.4  24 vksralqarikqltrare.wflskaedieLYgewQTepy 61 
                 v ++a+   +k+ + ++  w++ k   +eL+g+  T++ 
  MMETSP1325-20131115|6242_1 125 VTMAANEHWSKRGEYMTSfWEETKLAAQELFGKKETKLL 163
                 5677777888888889999*****************875 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0077
                 EEEE-..........-----.-------EEEEB-G CS
   PF10404.4  22 Kkvksralqarikqltrare.wflskaedieLYge 55 
                 K+v+  + +a + + +  +  ++++++e + LYge
  MMETSP1325-20131115|6242_1 165 KRVHDGNPNAAKPKDA--EDmEDEEEEEPLNLYGE 197
                 5555544444444443..334699*********98 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.16
                 ........-----.------- CS
   PF10404.4  29 lqarikqltrare.wflskae 48 
                 + + +++l++ re w++s+++
  MMETSP1325-20131115|6242_1 244 KDRVNDRLEDVREaWETSQNP 264
                 567789999999999999865 PP

  == domain 4    score: -3.6 bits;  conditional E-value: 1.9
                 ----SEEEE-... CS
   PF10404.4  17 geqPlKkvksral 29 
                 +e++lKkv    +
  MMETSP1325-20131115|6242_1 330 LEDALKKVANDIR 342
                 5788888876333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       721  (0.0527355); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.53
# Mc/sec: 1998.47
//
Query:       MMETSP1325-20131115|6247_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-12   45.2   0.0    7.4e-12   44.7   0.0    1.3  1  PF13740.1  ACT domain
    6.4e-12   44.8   0.4      1e-11   44.1   0.3    1.3  1  PF04117.7  Mpv17 / PMP22 family
  ------ inclusion threshold ------
      0.027   13.8   0.0      0.051   12.9   0.0    1.4  1  PF01842.20 ACT domain


Domain annotation for each model (and alignments):
>> PF13740.1  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0   1.6e-15   7.4e-12       2      64 ..     123     185 ..     122     193 .. 0.93

  Alignments for each domain:
  == domain 1    score: 44.7 bits;  conditional E-value: 1.6e-15
   PF13740.1   2 iLlitvtGpdrpGltasLtevlaefgcnildsrqavihgrltLgmlvsgpeeaierlekaLlf 64 
                 +L+it+ G+dr Gl+  ++e ++++g++i +s++++++g+++ +m vs++++a  + ++ L++
  MMETSP1325-20131115|6247_1 123 HLIITAHGADRVGLIHTFAEFCHSYGASISESKMVRMGGQFMVMMIVSMDPKATPEFRAGLQQ 185
                 79************************************************9999888888876 PP

>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.3   2.3e-15     1e-11       4      66 ..      22      84 ..      20      86 .. 0.94

  Alignments for each domain:
  == domain 1    score: 44.1 bits;  conditional E-value: 2.3e-15
   PF04117.7  4 legksleeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvnlvslgWntyLSlik 66
                + g +++e   k  e++ + ++a w+vW+++ ++nF+f P  +r++ v + sl+W+++LS ++
  MMETSP1325-20131115|6247_1 22 VAGGTAAEGLTKYSENYKEDMVALWKVWIPATIFNFTFSPMWMRIPTVATTSLLWTCILSAMR 84
                5689999*****************************************************875 PP

>> PF01842.20  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.1e-05     0.051       2      52 ..     125     174 ..     124     184 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.1e-05
                 EEEEEEESSTHHHHHHHHHHHHTT--ECEEEEEEESS.EEEEEEEEEECHH CS
  PF01842.20   2 vlevgvpDrPGlLaevfgaLadrgiNidsisqstsgdkagivfvtvvvdee 52 
                 +++ + +Dr+Gl+++++  +  +g++i      ++g+   +v+++v++d +
  MMETSP1325-20131115|6247_1 125 IITAHGADRVGLIHTFAEFCHSYGASISESKMVRMGG-QFMVMMIVSMDPK 174
                 688899*************************999999.6666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 997.67
//
Query:       MMETSP1325-20131115|6237_1  [L=876]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-15   53.7   8.3    7.4e-05   22.3   0.3    3.9  3  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
      0.036   14.1   0.0      0.091   12.8   0.0    1.6  1  PF10302.4  DUF2407 ubiquitin-like domain
      0.037   13.3   0.1      0.081   12.2   0.1    1.6  1  PF09280.6  XPC-binding domain
      0.053   12.9   0.9        2.1    7.7   0.0    2.8  3  PF02845.11 CUE domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.3   2.2e-08   7.4e-05       1      33 [.     468     500 ..     468     503 .. 0.96
   2 !   17.4   0.1   7.7e-07    0.0026       4      34 ..     536     566 ..     533     569 .. 0.91
   3 !   17.0   0.1   9.8e-07    0.0033       2      26 ..     594     618 ..     593     628 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 2.2e-08
                 CTHHHHHHHHH----HHHHHHHHHHTTTSHHHH CS
  PF00627.26   1 ideeaiqqLreMGfsreeakkALratnnnvErA 33 
                 +de+++ +L  +G+sr +a+ ALr++ +n +rA
  MMETSP1325-20131115|6237_1 468 VDEASVSMLTNLGASRAQATAALRRSEGNADRA 500
                 589*****************************9 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 7.7e-07
                 HHHHHHHH----HHHHHHHHHHTTTSHHHHH CS
  PF00627.26   4 eaiqqLreMGfsreeakkALratnnnvErAv 34 
                  ++ qL+ M+ ++  a  ALr tnn++ +A 
  MMETSP1325-20131115|6237_1 536 GLVTQLVNMNIDKKLACAALRHTNNDLAAAL 566
                 5799************************996 PP

  == domain 3    score: 17.0 bits;  conditional E-value: 9.8e-07
                 THHHHHHHHH----HHHHHHHHHHT CS
  PF00627.26   2 deeaiqqLreMGfsreeakkALrat 26 
                 de a+ qL+ MGf+   a +ALr++
  MMETSP1325-20131115|6237_1 594 DEMALCQLVSMGFEQAVAERALRES 618
                 7899******************987 PP

>> PF10302.4  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.7e-05     0.091      18      65 ..     182     230 ..     173     265 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.7e-05
   PF10302.4  18 inspnsltvaeLkrliRerl.pgdlsrrrLrlIyaGkvLndesalasdl 65 
                 i+     t a+ k+++R+++  +  +  +L +I aG++L+d+ +la++ 
  MMETSP1325-20131115|6237_1 182 IQAGFDATGAQVKSMVRQEVmAEIGAVATLSIISAGRSLDDRRSLADQG 230
                 55555678899*********55567899***************999875 PP

>> PF09280.6  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   2.4e-05     0.081       8      57 ..       2      57 ..       1      59 [. 0.85

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 2.4e-05
   PF09280.6  8 pqfqqlrqvvqqnPe...lLqplLqqL..gqsnP.qllqlIqqnqeeFlrlLnega 57
                pq q+lr+ + + Pe   +  ++L+qL  +   P +l++ I++++ +Fl+lL+e+ 
  MMETSP1325-20131115|6237_1  2 PQWQELRAFITSAPEpatVFAEMLRQLvaAGGEPlELAREIKKDPSQFLELLREPH 57
                899*********998666899*****94444677789999*************986 PP

>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0   0.00063       2.1      19      41 ..     485     507 ..     482     508 .. 0.85
   2 ?    2.6   0.0     0.026        88      14      34 ..     545     565 ..     545     569 .. 0.89
   3 ?   -2.3   0.0       0.9   3.1e+03      26      35 ..     626     635 ..     625     637 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00063
                 HHHHHHHHSTTTHHHHHHHHHHC CS
  PF02845.11  19 vIravLrasngnvEaainaLLeg 41 
                 +  a+Lr+s gn ++a+n    g
  MMETSP1325-20131115|6237_1 485 QATAALRRSEGNADRACNDFVDG 507
                 56799*************98777 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.026
                 TS-HHHHHHHHHHSTTTHHHH CS
  PF02845.11  14 dldeevIravLrasngnvEaa 34 
                 ++d+ + +a+Lr +n+++ aa
  MMETSP1325-20131115|6237_1 545 NIDKKLACAALRHTNNDLAAA 565
                 689999***********9987 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 0.9
                 HSTTTHHHHH CS
  PF02845.11  26 asngnvEaai 35 
                 as++ +E+ai
  MMETSP1325-20131115|6237_1 626 ASDNVIENAI 635
                 8999*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (876 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       586  (0.0428613); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.39u 0.36s 00:00:01.75 Elapsed: 00:00:00.68
# Mc/sec: 3087.07
//
Query:       MMETSP1325-20131115|6249_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 290.99
//
Query:       MMETSP1325-20131115|6248_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       857  (0.0626829); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.53
# Mc/sec: 1162.01
//
Query:       MMETSP1325-20131115|6250_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|6251_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       100  (0.00731422); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 153.37
//
Query:       MMETSP1325-20131115|6254_1  [L=458]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.3e-140  465.7   0.0   5.5e-140  465.3   0.0    1.1  1  PF00113.17 Enolase, C-terminal TIM barrel domain
    4.3e-23   81.5   0.0    7.8e-23   80.7   0.0    1.5  1  PF03952.11 Enolase, N-terminal domain
    2.6e-06   26.4   0.1    5.8e-06   25.3   0.1    1.5  1  PF07476.6  Methylaspartate ammonia-lyase C-terminus
     0.0017   18.2   0.0     0.0036   17.1   0.0    1.6  1  PF13378.1  Enolase C-terminal domain-like
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.22   11.4   0.0    1.5  1  PF02746.11 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00113.17  Enolase, C-terminal TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  465.3   0.0    2e-143  5.5e-140       2     294 ..      77     370 ..      76     372 .. 0.97

  Alignments for each domain:
  == domain 1    score: 465.3 bits;  conditional E-value: 2e-143
  PF00113.17   2 vvlPvPalnvinGGshagnklalqefmilPtGassfkealrlGaevyhklksvikkkygksatnvGdeGGfaPnlqsnkealdlikeaiekaGykgkvkialdvassefykekdgkydldfkn..eesdkskkltseeladlykelvkkyPivsiedpfdeddweawkklteelgdkiqivGddltvtnpkrlkkaiekkaanalllkvnqiGsvtesleavklakkagygvvvshrsGetedtfiadlavglkaGqiktGapcrserlakynqllrieeelgekakyaGkkfrk 294
                 +vlP P +nvinGGshagn+la+qe+ ++PtGa+sf+ea+++G+evyh+l+++ik+kyg +at +GdeGGfaP  + ++++++li+eai+kaGy+gk +++ldva+sef  + ++kydldfk   +++d+s +++ ++l  +y+el++++Piv+iedpfdeddw++w+ +t ++g k+q+vGddltvtnp++++ka+++k +n+lllkvnqiGs++es++avklak++g+gv+ shrsGeted++iadlavgl++GqiktGapcrserl+kynqllrieeelg+ka+yaGk++ +
  MMETSP1325-20131115|6254_1  77 FVLPTPCFNVINGGSHAGNRLAFQEYFVIPTGAESFSEAMQMGCEVYHNLAKIIKAKYGGDATLIGDEGGFAPPCD-QRSGVELIMEAINKAGYDGKCTVGLDVAASEFKVKGEDKYDLDFKTsgADKDPSLMISGSDLGSFYQELAADFPIVTIEDPFDEDDWSTWSAFTGDVGGKFQVVGDDLTVTNPTKIQKAVDEKSCNCLLLKVNQIGSISESINAVKLAKQNGWGVMTSHRSGETEDSYIADLAVGLCTGQIKTGAPCRSERLSKYNQLLRIEEELGDKATYAGKDSAR 370
                 89***********************************************************************986.5789****************************************972257788999**************************************************************************************************************************************************************9876 PP

>> PF03952.11  Enolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.0   2.8e-26   7.8e-23      67     132 .]       2      67 ..       1      67 [. 0.98

  Alignments for each domain:
  == domain 1    score: 80.7 bits;  conditional E-value: 2.8e-26
                 HHHHHT---------TT-HHHHHHHHHHH---TT------TTT---HHHHHHHHHHH----HHHHH CS
  PF03952.11  67 envneeiapaligldvedqkeiDkllieldgtenksklGanailavSlAvakaaAaakklplyryl 132
                 +nvn++iap l+g+d ++q+e+D+++ie+dgt+nk+klGanail+vSlA+ ka+Aaak++ply+++
  MMETSP1325-20131115|6254_1   2 ANVNDVIAPMLVGKDPTQQEELDNMMIEADGTPNKEKLGANAILGVSLALSKAGAAAKGVPLYQHF 67 
                 69**************************************************************95 PP

>> PF07476.6  Methylaspartate ammonia-lyase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.1   2.1e-09   5.8e-06     136     218 ..     249     332 ..     217     337 .. 0.85

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 2.1e-09
                 ----EEEEE-TT--S.HHHHHHHHHTT--SEEE--GGG----HHHHHHHHHHHH---EEEE---TTS-HHHHHHHHHHHHHH-- CS
   PF07476.6 136 rgvkvelvaDeWcnt.ledikefvdaeaadlvqiktPDlGginntieavlyckekgvgaylGGscnetdvsarvsvhvalatra 218
                  g k ++v D+ + t    i++ vd+++++ + +k+  +G+i+++i+av  +k++g g+++   + et+ s  +   v+l t+ 
  MMETSP1325-20131115|6254_1 249 VGGKFQVVGDDLTVTnPTKIQKAVDEKSCNCLLLKVNQIGSISESINAVKLAKQNGWGVMTSHRSGETEDSYIADLAVGLCTGQ 332
                 5667889999987662579****************************************************9999999998865 PP

>> PF13378.1  Enolase C-terminal domain-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.3e-06    0.0036       4      71 ..     262     331 ..     259     363 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.3e-06
                 SSSHHHHHHHHHTT--SEEEEBTTTCH-HHHHHHHHHHHHHTT-EEEEBS.C.SHHHHHHHHHHHHHTST CS
   PF13378.1   4 ltsrrdfrrlleagavdiiqpdlakvGGitealriaalaeayglpvaphs.m.espiglaaalhlaaalp 71 
                 +t++  ++++++++++ ++ +++ ++G i+e++ +++la+++g+ v+      e+  +  a l++  ++ 
  MMETSP1325-20131115|6254_1 262 VTNPTKIQKAVDEKSCNCLLLKVNQIGSISESINAVKLAKQNGWGVMTSHrSgETEDSYIADLAVGLCTG 331
                 6889999*********99***************************9987745677666666666666654 PP

>> PF02746.11  Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.9e-05      0.22      57     114 ..       2      65 ..       1      67 [. 0.84

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.9e-05
                 HHHHHHHHHHHCTTBCCHHHHHHHHHHHHCS-......HHHHHHHHHHHHHHHHHHTTTS-HHH CS
  PF02746.11  57 aelddhlapllvgkdaanisdlaqllkravlg......nmsAkaaidmAlwDlkakalnlplad 114
                 a+++d +ap+lvgkd+++ ++l +++  a          + A+ ++  Al  + a a+++pl++
  MMETSP1325-20131115|6254_1   2 ANVNDVIAPMLVGKDPTQQEELDNMMIEADGTpnkeklGANAILGVSLALSKAGAAAKGVPLYQ 65 
                 578999**********9999988777665444488887788999***************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.76u 0.39s 00:00:01.14 Elapsed: 00:00:00.57
# Mc/sec: 1892.30
//
Query:       MMETSP1325-20131115|6257_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-15   55.5   0.8    3.4e-15   55.5   0.6    1.0  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.6   2.5e-19   3.4e-15      40      92 ..      11      63 ..       3      65 .] 0.94

  Alignments for each domain:
  == domain 1    score: 55.5 bits;  conditional E-value: 2.5e-19
                EEEEEESEEEETTS-HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHH CS
  PF00225.18 40 ekeftFdkvfdeeatqeevyeelakplvesvleGynvtifaYGqtgsGKTytm 92
                 +ef +d  f+e +t++e y++ +++ v+sv +Gyn+t+faYGqtgsGK++tm
  MMETSP1325-20131115|6257_1 11 LREFDLDGGFEERVTTAEAYTASCSSTVSSVAAGYNGTVFAYGQTGSGKSHTM 63
                579************************************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 268.56
//
Query:       MMETSP1325-20131115|6253_1  [L=417]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   11.5   0.1       0.23   10.7   0.1    1.4  1  PF13392.1 HNH endonuclease


Domain annotation for each model (and alignments):
>> PF13392.1  HNH endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   1.7e-05      0.23      14      32 ..     376     394 ..     369     396 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 1.7e-05
   PF13392.1  14 piPdghvVdHkdgnklnnr 32 
                  + dg+ V+H + +k++n+
  MMETSP1325-20131115|6253_1 376 ALDDGMDVHHENEIKTDNS 394
                 6789**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.40s 00:00:01.12 Elapsed: 00:00:00.53
# Mc/sec: 1885.44
//
Query:       MMETSP1325-20131115|6256_1  [L=427]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   13.5   0.0      0.039   12.9   0.0    1.2  1  PF00732.14 GMC oxidoreductase


Domain annotation for each model (and alignments):
>> PF00732.14  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.9e-06     0.039     193     260 ..     119     182 ..      95     200 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.9e-06
                 -HHHHHTTTTTT-TTEEEE---------E..------EE---EE------.-EE-EEEEEEEE-----SH CS
  PF00732.14 193 starawLrpalerpnleiltgakaekiil..eegrkkravGVeasdkkgtvkrlvvaakevvvaaGalns 260
                 s+  + L+ a++r + +++ +a +eki +    g + +avGV+++  + t      a+  vv+ aGa n+
  MMETSP1325-20131115|6256_1 119 SSIAKTLVSAINRRGGHVMVRAPVEKINVepLPGGGWKAVGVTCKGVDIT------ARLGVVSNAGATNT 182
                 55566789999999*************9977346899*******988877......66778888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.35s 00:00:01.10 Elapsed: 00:00:00.48
# Mc/sec: 2131.76
//
Query:       MMETSP1325-20131115|6260_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-45  155.5   4.8    2.1e-45  155.2   3.3    1.0  1  PF00654.15 Voltage gated chloride channel
     0.0015   18.2   1.0     0.0015   18.2   0.7    3.1  2  PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
  ------ inclusion threshold ------
        3.8    6.6   6.8       0.38    9.8   0.8    2.2  2  PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal


Domain annotation for each model (and alignments):
>> PF00654.15  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.2   3.3   4.5e-49   2.1e-45       3     147 ..      11     189 ..       9     211 .. 0.87

  Alignments for each domain:
  == domain 1    score: 155.2 bits;  conditional E-value: 4.5e-49
                 HHHHHHCCCCC-CCG-----TTT---TTSSS--..-HHHHHHHHH------------------TTT-------HHH.........................HH......TT.---HHHHH.HHH-------HHHHT-ST---TTTTTTTS-TT--TTHHHHH---HHHHHHHHHHSTT- CS
  PF00654.15   3 gllagllvkrvapeaagsGipevkaalngvkgp..lslrtllvkvvalvlavgsGlslGreGplvqiGAavgsgls.........................rl......lklsrndrrrr.lvaaGaAAGlAaaFnaPlgGvlfalEelsrdlslrallpvlvaslvaalvlrlllgse 147
                 +++ + l  +vap+aagsGipevka+lngv+++  +s+ +++vk++++vlav+sGl +G eGp+v++GA+vgsg+                          r+      l  +r+dr+rr ++++GaAAG+AaaF+aP+gGv+falEe ++ +s  +++++l+a+l++ ++l +l   +
  MMETSP1325-20131115|6260_1  11 VAVGSALSLWVAPGAAGSGIPEVKAYLNGVRIRhfFSFYVFWVKLIGTVLAVSSGLVVGPEGPMVHLGAIVGSGFTsgrkqinlafpnilgprfgppwfvrRInfdmkfLMRFRSDRDRRdFISIGAAAGFAAAFGAPIGGVMFALEEAASFWSPTLMWRTLTATLMSIFTLLMLSNMD 189
                 56778888999*****************************************************************999999999998888888888877611555554444999999999*****************************999********************994333 PP

>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   2.3      0.43     2e+03      10      23 ..      15      28 ..       9      31 .. 0.80
   2 !   18.2   0.7   3.2e-07    0.0015       4      25 ..     129     150 ..     128     151 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.43
   PF10518.4 10 ggaaaaAaaalgga 23
                 ++ ++ a++++g 
  MMETSP1325-20131115|6260_1 15 SALSLWVAPGAAGS 28
                57888999999986 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 3.2e-07
   PF10518.4   4 RRqfLkggaaaaAaaalggala 25 
                 RR+f+  gaaa+ aaa+g++ +
  MMETSP1325-20131115|6260_1 129 RRDFISIGAAAGFAAAFGAPIG 150
                 ******************9976 PP

>> PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.3      0.34   1.5e+03      23      32 ..      11      20 ..       8      20 .. 0.73
   2 ?    9.8   0.8   8.4e-05      0.38       8      24 ..     126     144 ..     124     150 .. 0.66

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.34
                --------HH CS
   PF10399.4 23 gaVGaaaaaw 32
                 aVG a+ +w
  MMETSP1325-20131115|6260_1 11 VAVGSALSLW 20
                5888888888 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 8.4e-05
                 ----HHHHHHHHHH..--- CS
   PF10399.4   8 eptRRDFLylATaa..vga 24 
                 + +RRDF+ + +aa  ++a
  MMETSP1325-20131115|6260_1 126 DRDRRDFISIGAAAgfAAA 144
                 789*****98655422344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1059.19
//
Query:       MMETSP1325-20131115|6262_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-17   61.6   4.9    6.8e-17   61.0   3.4    1.2  1  PF01363.16 FYVE zinc finger
  ------ inclusion threshold ------
        6.1    6.6  10.1         10    5.9   4.4    2.4  2  PF01485.16 IBR domain
        7.3    6.4   9.6        3.5    7.4   4.1    2.2  2  PF00643.19 B-box zinc finger


Domain annotation for each model (and alignments):
>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   3.4   1.5e-20   6.8e-17       3      65 ..      93     153 ..      91     155 .. 0.96

  Alignments for each domain:
  == domain 1    score: 61.0 bits;  conditional E-value: 1.5e-20
  PF01363.16   3 wvpdaeakkCeiCakkFsltrrrhhCrlCGkvvCskCsskrvekleeeaaeekevrvCkeCle 65 
                 wvpd++a++C  C+k+F ++  rhhCr CG++vC++Cs  r++ +  + + ++++r+C  C++
  MMETSP1325-20131115|6262_1  93 WVPDQHANSCGRCDKPFGALLWRHHCRKCGSAVCNACSPFRAPLP--RIGLKAPQRICFVCKA 153
                 ******************************************888..99************87 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.4    0.0023        10      19      55 ..     100     130 ..      72     133 .. 0.62
   2 ?    1.7   0.1     0.048   2.2e+02      48      57 ..     145     154 ..     143     156 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0023
  PF01485.16  19 kwCprpdCeaiiekekgakkssvtCskCgfefCflCk 55 
                 + C r  C++++ +         +C+kCg ++C  C 
  MMETSP1325-20131115|6262_1 100 NSCGR--CDKPFGALLW----RHHCRKCGSAVCNACS 130
                 34433..4444444444....456************5 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.048
  PF01485.16  48 fefCflCkke 57 
                 +++Cf Ck+e
  MMETSP1325-20131115|6262_1 145 QRICFVCKAE 154
                 579****986 PP

>> PF00643.19  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.1   0.00076       3.5       4      30 ..     100     130 ..      97     131 .. 0.76
   2 ?   -0.5   0.1      0.24   1.1e+03       4      10 ..     146     152 ..     143     156 .. 0.59

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00076
  PF00643.19   4 rkCpeHeeke....lqlfCedCqqllCedCl 30 
                 + C ++++       + +C++C++ +C+ C+
  MMETSP1325-20131115|6262_1 100 NSCGRCDKPFgallWRHHCRKCGSAVCNACS 130
                 678888855444446789************5 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.24
  PF00643.19   4 rkCpeHe 10 
                 r+C  ++
  MMETSP1325-20131115|6262_1 146 RICFVCK 152
                 5555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       510  (0.0373025); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 984.59
//
Query:       MMETSP1325-20131115|6265_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 644.35
//
Query:       MMETSP1325-20131115|6259_1  [L=361]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       633  (0.046299); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.61
# Mc/sec: 1418.17
//
Query:       MMETSP1325-20131115|6270_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 825.41
//
Query:       MMETSP1325-20131115|6272_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.67
# Mc/sec: 211.02
//
Query:       MMETSP1325-20131115|6273_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.066   13.2   0.2        1.5    8.8   0.0    2.0  2  PF07037.6 Putative transcription regulator (DUF1323)


Domain annotation for each model (and alignments):
>> PF07037.6  Putative transcription regulator (DUF1323)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00011       1.5      76     109 ..      13      46 ..       3      50 .. 0.82
   2 ?    2.6   0.1    0.0097   1.3e+02       1      26 [.      58      84 ..      58      86 .. 0.66

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00011
   PF07037.6  76 vtedaeleallietleeltpseqkklaelllreG 109
                 v ++a+  + l+++++elt+ eq+kl++ ++  G
  MMETSP1325-20131115|6273_1  13 VLAPASTISHLTRAVRELTDLEQDKLHDAFVAYG 46 
                 5567788899****************98776655 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.0097
   PF07037.6  1 mtpeela.e..llGyarqtinrWvRkegW 26
                mtp+e+  e  + G+ +q   rW R  gW
  MMETSP1325-20131115|6273_1 58 MTPKEIMsEdtVHGMMAQ--VRWYRTIGW 84
                899887513114455555..69******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|6274_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|6269_1  [L=420]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-39  135.1   0.4    2.9e-39  134.1   0.1    1.6  2  PF00270.24 DEAD/DEAH box helicase
    7.4e-28   96.1   0.5    2.6e-27   94.3   0.3    1.9  2  PF00271.26 Helicase conserved C-terminal domain
    2.7e-06   26.9   0.4    1.2e-05   24.8   0.0    2.2  2  PF13245.1  Part of AAA domain
     0.0043   16.7   0.0     0.0073   16.0   0.0    1.4  1  PF04851.10 Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.016   13.5   0.1        3.5    5.7   0.0    2.1  2  PF06862.7  Protein of unknown function (DUF1253)
      0.028   14.0   0.2      0.058   13.0   0.1    1.5  1  PF03511.9  Fanconi anaemia group A protein
        0.1   11.5   0.0       0.21   10.5   0.0    1.5  1  PF00579.20 tRNA synthetases class I (W and Y)


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.1   0.1   1.5e-42   2.9e-39       2     170 ..      72     234 ..      71     237 .. 0.94
   2 ?   -2.3   0.0       1.2   2.3e+03      75     106 ..     309     343 ..     276     357 .. 0.61

  Alignments for each domain:
  == domain 1    score: 134.1 bits;  conditional E-value: 1.5e-42
                 HHHHHHHHHHHSS-EEEEEC-TT---HHHHHHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHHHTTTSS.EEEEETTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHHCCHHTTTEEEEEECTHHHHHCTTTHHHHHHHHHHSHHTTTSEEEEEESS-THHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00270.24   2 piQaeaiplilgggdvlvaaeTGsGKTlaflipvlqilletlkkttikkalivaPtreLaeqtlnnlkkfkkypklrvlliiggvalardqlsvldngvdivvgTpgrlddlvstgklnlsqvrllVlDEadrllsqgfsdqlnqilqilcdgkrlqvivlSATlpkdv 170
                 +iQ++ai+ +  g+d++++a+ G+GKT+ f++ +lq+l       ++ + li+aPtreLa+q+++ +  + + ++++v +++gg+a + d+ + l+ gv++vvgTpgr+ d+++++ l+l ++r++ lDEad++ls gf+dq++++ + l  ++++q++++SAT+p d+
  MMETSP1325-20131115|6269_1  72 AIQQRAIKPMTLGRDIIAQAQSGTGKTATFAVGILQMLDPM---VDDCQSLILAPTRELAQQIVKVIVAISDFMQVKVHACVGGTAVR-DDIRTLQSGVQVVVGTPGRVYDMINRRALRLDHMRIFALDEADEMLSRGFKDQIYDVFKFL--PENVQCCLFSATMPLDI 234
                 69*******9999*************************775...4789**************************************77.999999999*****************999*******************************9..777**********9554 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.2
                 SS.EEEEETTSSBHHHHHHHHH....T..-SEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxx RF
  PF00270.24  75 pklrvlliiggvalardqlsvl....dngvdivvgT 106
                 +++ v  ++g+++++ +++  +    ++  +++++T
  MMETSP1325-20131115|6269_1 309 KDFTVSSMHGDMDQR-ERDIIMrefrSGSSRVLITT 343
                 446777788887744.33333345666656666665 PP

>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.2   2.4e+03      10      38 ..     223     250 ..     215     253 .. 0.72
   2 !   94.3   0.3   1.4e-30   2.6e-27       3      78 .]     306     381 ..     304     381 .. 0.97

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.2
                 EEEE-TTS-HHHHHHHHHHHHTTTSSEEE CS
  PF00271.26  10 vailhgelpqnereeileqfnagkskvlv 38 
                 ++ + + +++ + +ei ++f ++  ++lv
  MMETSP1325-20131115|6269_1 223 CCLFSA-TMPLDILEITTRFMRDPIRILV 250
                 444444.5556668999999999999998 PP

  == domain 2    score: 94.3 bits;  conditional E-value: 1.4e-30
                 HHH----EEEE-TTS-HHHHHHHHHHHHTTTSSEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26   3 lekkgikvailhgelpqnereeileqfnagkskvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78 
                 +++k++ v  +hg++ q+er+ i+++f++g+s+vl++t+ ++rGid+++v++Vinfdlp+++++yi+riGR gR+g
  MMETSP1325-20131115|6269_1 306 MTEKDFTVSSMHGDMDQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTNRENYIHRIGRSGRFG 381
                 678999********************************************************************87 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0     6e-09   1.2e-05       7      62 ..      81     135 ..      75     164 .. 0.81
   2 ?   -0.7   0.1      0.55   1.1e+03       7      20 ..     159     174 ..     153     175 .. 0.74

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 6e-09
   PF13245.1   7 la.gnpllvvtGgPGtGKTttlaaiiaallaarekp.grsvllvaptgraakrlserl 62 
                  + g+ +++ ++  GtGKT+t a +i + l     + + + l++apt++ a+++ +++
  MMETSP1325-20131115|6269_1  81 MTlGRDIIA-QAQSGTGKTATFAVGILQML--DPMVdDCQSLILAPTRELAQQIVKVI 135
                 446789999.********************..66888999**************9888 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.55
   PF13245.1   7 la..gnpllvvtGgPG 20 
                 ++  ++++ vv G PG
  MMETSP1325-20131115|6269_1 159 IRtlQSGVQVVVGTPG 174
                 44445999999****9 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   3.7e-06    0.0073      26      70 ..      85     135 ..      42     169 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 3.7e-06
  PF04851.10  26 krglivmaTGtGKTlvaasliarlar......kflflvprkelleqaleef 70 
                 + ++ ++  GtGKT + a  i++++       + l+l+p++el +q  + +
  MMETSP1325-20131115|6269_1  85 RDIIAQAQSGTGKTATFAVGILQMLDpmvddcQSLILAPTRELAQQIVKVI 135
                 67889999**********99999999999*****************99877 PP

>> PF06862.7  Protein of unknown function (DUF1253)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.002       3.9      38      63 ..     116     141 ..      91     148 .. 0.86
   2 ?    5.7   0.0    0.0018       3.5     301     387 ..     287     371 ..     274     380 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.002
   PF06862.7  38 pkvLillpfrniakevvdllikllea 63 
                 ++ Lil p+r+ a+++v+ ++ ++  
  MMETSP1325-20131115|6269_1 116 CQSLILAPTRELAQQIVKVIVAISDF 141
                 6779****************998876 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0018
   PF06862.7 301 kgvlifipsYfdyvrirnylkkekisFaaiseytsekkisrarklFkkgrkkiLLvteRlhfyrRykikgvkkvifyslPefpefYs 387
                  + +i+  +  +   +++ +++++++  +++   ++++   + + F +g+ ++L++t+ l   r + +++v+ vi + lP+++e Y 
  MMETSP1325-20131115|6269_1 287 TQAIIYCNTRRKVDWLTDKMTEKDFTVSSMHGDMDQRERDIIMREFRSGSSRVLITTDLLA--RGIDVQQVSLVINFDLPTNRENYI 371
                 5556666665555567788999999999999999***********************9776..899***************999885 PP

>> PF03511.9  Fanconi anaemia group A protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1     3e-05     0.058      27      61 ..     278     311 ..     273     314 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3e-05
   PF03511.9  27 aellkavdvCaevleClekrkvsWlvlfqltekdl 61 
                 ++l  ++ +  +++ C  +rkv Wl   ++tekd 
  MMETSP1325-20131115|6269_1 278 CDLYETLTITQAIIYCNTRRKVDWLT-DKMTEKDF 311
                 577888999****************8.58999996 PP

>> PF00579.20  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00011      0.21      41     113 ..     311     384 ..     297     409 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00011
                 EEEEHHHHCCTTTT..SSHHHHHHHHHHHHHHHHHHHHHHCHCTTCEEEEGGGSTTCH.CHHHHHHHCCC--BHC CS
  PF00579.20  41 fliaDltAligdps.kaeerklrkreeelenaikaqlakgldpekaeivlnsdwlekl.elaellrdlgklgeln 113
                 f +  +++ +++ + +  +r++r+ + ++  + +++la+g+d +++++v+n d + +  +++  + + g++g+ +
  MMETSP1325-20131115|6269_1 311 FTVSSMHGDMDQRErDIIMREFRSGSSRVLIT-TDLLARGIDVQQVSLVINFDLPTNReNYIHRIGRSGRFGRKG 384
                 56667777777777778899999999998888.9********************987658888888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.75u 0.40s 00:00:01.14 Elapsed: 00:00:00.61
# Mc/sec: 1649.95
//
Query:       MMETSP1325-20131115|6276_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1080.71
//
Query:       MMETSP1325-20131115|6277_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.8e-08   31.7   0.0    1.5e-05   24.5   0.0    2.8  2  PF08240.7 Alcohol dehydrogenase GroES-like domain


Domain annotation for each model (and alignments):
>> PF08240.7  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.12   1.6e+03      55      82 ..      19      46 ..      12      64 .. 0.76
   2 !   24.5   0.0   1.1e-09   1.5e-05       3      61 ..      76     135 ..      74     162 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.12
                ---EEEE--EEE-SSSHHHHTT-GGG-S CS
   PF08240.7 55 vGdrvvvepliscgeCeaCkegeenlce 82
                 G + ++++ i+    ++  eg +++c+
  MMETSP1325-20131115|6277_1 19 LGGHLTISWYIGAAVAAKSMEGTSTMCA 46
                5777788888888888888888888883 PP

  == domain 2    score: 24.5 bits;  conditional E-value: 1.1e-09
                 EEEEEEEEB---HHHHHHH--...TTTT--SSEE----BE-EEEEE----B------EEEE CS
   PF08240.7   3 evlvkvkaaGiCgsDlhivkge..kelevklplilGhEivGiveevgegvkklkvGdrvvv 61 
                   l+++++a+++  D +++          +lp i+G +++G+ve+  ++   +kvGdrv+ 
  MMETSP1325-20131115|6277_1  76 TLLIRIHYAALNPVDAKTRARAneSAWMGNLPTIPGADLSGVVEQADKDS-PYKVGDRVMG 135
                 689*************88777655778899***************99886.8*******85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|6277_2  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.003   16.8   4.5      0.003   16.8   3.1    1.1  1  PF05308.6  Mitochondrial fission regulator
  ------ inclusion threshold ------
        1.2    8.2   7.8        1.4    8.0   5.4    1.1  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   3.1   4.4e-07     0.003     187     223 ..      19      55 ..       4      80 .. 0.65

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 4.4e-07
   PF05308.6 187 evppppppPpPlpavslqqsasaielikerkekksae 223
                 +++pppppPpP++++++  ++s +e++  +   +s +
  MMETSP1325-20131115|6277_2  19 QRTPPPPPPPPPSPPAVSVPMSVSECACASMSTRSGS 55 
                 4557777777777777777777776655444433333 PP

>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.4    0.0002       1.4     229     247 ..      20      38 ..       4      60 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0002
                 XXXXXXXXXXXXXX..... CS
  PF01213.14 229 ktaaPppPpppppPsvdti 247
                 +t+ PppPppp+pP v++ 
  MMETSP1325-20131115|6277_2  20 RTPPPPPPPPPSPPAVSVP 38 
                 4455556666666644332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       485  (0.035474); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 494.57
//
Query:       MMETSP1325-20131115|6281_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 155.32
//
Query:       MMETSP1325-20131115|6282_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 800.38
//
Query:       MMETSP1325-20131115|6283_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 535.36
//
Query:       MMETSP1325-20131115|6267_1  [L=684]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.088   12.4   0.3       0.15   11.6   0.2    1.3  1  PF07558.6 Shugoshin N-terminal coiled-coil region
        1.8    8.2   4.5       0.47   10.1   0.1    2.2  2  PF08614.6 Autophagy protein 16 (ATG16)


Domain annotation for each model (and alignments):
>> PF07558.6  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   2.2e-05      0.15      24      44 ..     346     366 ..     339     368 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.2e-05
   PF07558.6  24 selekevskLlnENvnLRell 44 
                 + ++ e+ +L+nEN++LR+ l
  MMETSP1325-20131115|6267_1 346 RSCQAEIVSLRNENAQLRSNL 366
                 789***************975 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   6.9e-05      0.47      45     104 ..     315     373 ..     302     376 .. 0.85
   2 ?   -2.5   0.5       0.5   3.4e+03      84      98 ..     577     590 ..     512     641 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 6.9e-05
   PF08614.6  45 aekkevqssassstsasgsgsdaaiaeleqklaklreelaelhkkrgelaqrllllneel 104
                 a +++ + s+s + s s++g+   ++++e++l + ++e+  l  ++++l ++l +++  +
  MMETSP1325-20131115|6267_1 315 A-AASGATSTSLHVSLSDMGNADFKQAMEAILRSCQAEIVSLRNENAQLRSNLAETDRRM 373
                 3.45556689999999************************************99988765 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.5
   PF08614.6  84 aelhkkrgelaqrll 98 
                 +el+ ++ +l+q+l 
  MMETSP1325-20131115|6267_1 577 TELQ-AQHDLQQMLP 590
                 3332.3334444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (684 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       754  (0.0551492); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.12u 0.36s 00:00:01.48 Elapsed: 00:00:00.60
# Mc/sec: 2731.85
//
Query:       MMETSP1325-20131115|6285_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 792.26
//
Query:       MMETSP1325-20131115|6289_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-10   40.9   0.0    2.6e-10   40.5   0.0    1.1  1  PF03372.18 Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> PF03372.18  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   1.9e-14   2.6e-10     108     240 ..      19     172 ..       6     180 .. 0.72

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 1.9e-14
                 TCEEEEEEEEEE...CTEEEEEEECHHHC........TSSTTSHHHHHHHHHHHHHHCCHHHHSEEEE---S--BSSGH.......TTTBHHHHHSHHCBHBCCHHHHCBTT-C..........--SB--TC-TTTCCCHHB.............--S--EEBHHHCCCCEEEE CS
  PF03372.18 108 sknkgdvpvrfr...ggktlalvntHltp........gnrlrqrderallaeidkladdsrgspvilaGDfNsrpdspd.......kgfrenaadflpgdgfddglrallphll..........lptspgttdtyekagepa.............rlDyilvssgwpalvvsga 240
                 ++n+ +v vr++    g ++++   H +         ++ +++   + l+++++k+a +++   +++aGDfN+ p++p+       + ++++ + ++ +++fdd ++++++ +           +++                            +lDyi+ s+ w+++    +
  MMETSP1325-20131115|6289_1  19 RRNNCVVMVRLKdksSGASFVVADYHMPClfgsdkkcSVMTAH--SALLFQHAQKWAGKDP---IVIAGDFNIKPRDPTyalmskgTLDPSHPWQPPSPAPFDDPFDKNHWRAEmkpmrsaylvKNGVE------------PeytnfgadgvfceTLDYIWLSPEWDVKS---V 172
                 4556666666667888889999999977777778877888889..99************99...********999888888888887778888888888888888888877777444444444333333............03455555556669*******66665554...3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 1086.01
//
Query:       MMETSP1325-20131115|6290_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-06   27.0   0.1    2.7e-06   26.8   0.0    1.1  1  PF04051.11 Transport protein particle (TRAPP) component
  ------ inclusion threshold ------
       0.11   12.6   0.0       0.13   12.4   0.0    1.1  1  PF03872.8  Anti sigma-E protein RseA, N-terminal domain


Domain annotation for each model (and alignments):
>> PF04051.11  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   3.9e-10   2.7e-06     114     149 ..       1      35 [.       1      38 [. 0.93

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 3.9e-10
  PF04051.11 114 vcGiirGaLeslgfkaevtaevselrkprtkfeikv 149
                 +cG irGaLe++g+k+e+ +++++lr++ ++ ei+v
  MMETSP1325-20131115|6290_1   1 LCGAIRGALEMVGIKVECRFVRDTLRGD-EVNEIQV 35 
                 6************************888.9999998 PP

>> PF03872.8  Anti sigma-E protein RseA, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.9e-05      0.13      39      62 ..      21      44 ..      18      52 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.9e-05
   PF03872.8 39 igdvlrgdapesleldiaarvaaa 62
                ++d+lrgd+++ ++++i +r+++ 
  MMETSP1325-20131115|6290_1 21 VRDTLRGDEVNEIQVAIVERIEET 44
                8*******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 230.92
//
Query:       MMETSP1325-20131115|6279_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-61  204.8   0.1      6e-61  204.4   0.0    1.1  1  PF00071.17 Ras family
    1.5e-19   70.5   0.0    5.3e-19   68.7   0.0    1.8  2  PF08477.8  Miro-like protein
    8.4e-15   54.3   0.0    1.1e-14   53.9   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    0.00022   20.3   0.0    0.00028   19.9   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    0.00098   18.4   0.0     0.0036   16.6   0.0    1.8  1  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.015   15.1   0.0    1.4  1  PF01926.18 50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.4   0.0   2.6e-64     6e-61       1     160 [.      10     169 ..      10     171 .. 0.99

  Alignments for each domain:
  == domain 1    score: 204.4 bits;  conditional E-value: 2.6e-64
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellrei 160
                 Klvl+Gd+avGK++l++rfv+d+F e +e+Tig++f+t+++ +++ +vk+eiwDTAGqe+++sl+++yyr+a ++++vydit+++sf+ +k+wv+e++r  + nv+i+L GnK+Dle+kr+v++ee++++a+e+++ ++etSAk+++nv+ +f e++r++
  MMETSP1325-20131115|6279_1  10 KLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALEDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKDSFNGAKSWVKELQRRGDPNVVIALAGNKMDLEHKRKVEFEEASAYAQENNILHMETSAKSATNVKALFVEIARKL 169
                 99***********************************************************************************************************************************************************997 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.0   2.3e-22   5.3e-19       1     119 []      10     124 ..      10     124 .. 0.93
   2 ?   -1.0   0.0      0.92   2.1e+03      31      61 ..     149     190 ..     134     198 .. 0.60

  Alignments for each domain:
  == domain 1    score: 68.7 bits;  conditional E-value: 2.3e-22
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                 k+v++Gd+ vGKs l++++v++ef   + +e+++g+    +t+ ++ +t ++e+wd++g+e+  +  ++  + a+a+++vyd+t+++s++ +   ++w +el+++g   +++ l gnk+D
  MMETSP1325-20131115|6279_1  10 KLVLLGDTAVGKSCLVVRFVRDEFF--EFQEPTIGAAFLTQTVALEDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKDSFNGA---KSWVKELQRRGDPnVVIALAGNKMD 124
                 899**********************..9*********************************999976777*********************8...67888877777766*********98 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.92
   PF08477.8  31 eeikgdtlavktlevdvdtel...........lelwdlggre 61 
                 e + ++ ++vk l+v+++++l           + +  ++gre
  MMETSP1325-20131115|6279_1 149 ETSAKSATNVKALFVEIARKLpknppetqreaFPIIPPKGRE 190
                 334566777888888888877555555555555555555555 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.0   4.9e-18   1.1e-14      14     133 ..       8     131 ..       2     168 .. 0.80

  Alignments for each domain:
  == domain 1    score: 53.9 bits;  conditional E-value: 4.9e-18
                 EEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---H CS
  PF00025.16  14 elrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealse 133
                 +++++llG  + GK+ ++ ++  +e+ + + PTig  f +++++    ++kf++wD  Gqe+ R+l   Y++   a i v D ++++ ++ ak+ +k+l ++ +  +v++ + +NK+Dl++  + 
  MMETSP1325-20131115|6279_1   8 HFKLVLLGDTAVGKSCLVVRFVRDEFFEfQEPTIGaaFLTQTVALedATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKDSFNGAKSWVKELQRRGD-PNVVIALAGNKMDLEHKRKV 131
                 789*****9999*************998578***9444456665543789***********************************************9876665.67888889******876543 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.2e-07   0.00028       1     142 [.      10     142 ..      10     167 .. 0.76

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.2e-07
   PF04670.7   1 klLLmGksgsGKtSmr.siiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallq.yspeakvfvlihKmDlisedereeifeerkeeire 142
                 kl+L+G +  GK+++    + +++   +  ++ga    +   +   + +k+++wD+ Gqe++ +      +   ++   + i V Di+    +++++  ++ ++ l++  +p++ +    +KmDl   ++r+  fee  +  +e
  MMETSP1325-20131115|6279_1  10 KLVLLGDTAVGKSCLVvRFVRDEFFEFQEPTIGAAFLTQTVAL-EDATVKFEIWDTAGQERYRSL-----APMYYRGAAAAIVVYDIT---NKDSFNGAKSWVKELQRrGDPNVVIALAGNKMDLE--HKRKVEFEEASAYAQE 142
                 899***********75267888999999999999985444444.58889**********998877.....5899999999999*****...467888888888888651588999999999***75..4555555555444433 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.6e-06    0.0036      58     187 ..      47     170 ..       7     171 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.6e-06
                 SEEEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.S-HHHHHHHHHHHHTT--...EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHHHSC CS
  PF00009.22  58 saaisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqTeevlrlakklgvk...iivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaivellp 187
                 ++++ le   ++ ++ + Dt G + + +      r + +a++v d ++    +  +  ++ +++ g +   i ++ NK+D+ +++  e  e         y ++  +++  + +Sa+++++++aL+  i ++lp
  MMETSP1325-20131115|6279_1  47 TQTVALE--DATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKdSFNGAKSWVKELQRRGDPnvvIALAGNKMDLEHKRKVEFEEASA------YAQE--NNILHMETSAKSATNVKALFVEIARKLP 170
                 4555566..9999********************************9876344445555566666666664355577****97554443333333......2233..3688899999999999999999998887 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   6.7e-06     0.015       2      89 ..      11      92 ..      10     163 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.7e-06
                EEEE--TT---HHHHHHHHCST....CTEETS-TT-SSSESEEEEETTE..EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTS CS
  PF01926.18  2 vaivGrpNvGKStLinaLtgek....aakvsdypgtTrditenevkkek..iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasa 89
                ++++G + vGKS L+ + ++++    +  +   ++ T+++  + +   +  ++++Dt+G            ++++      + a ++++v d+++
  MMETSP1325-20131115|6279_1 11 LVLLGDTAVGKSCLVVRFVRDEffefQEPTIGAAFLTQTVALEDA---TvkFEIWDTAGQE----------RYRSLAPMYyRGAAAAIVVYDITN 92
                689****************85544444456666778888844332...12379******21..........233333333366666666666332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.54
# Mc/sec: 1269.18
//
Query:       MMETSP1325-20131115|6292_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|6293_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 551.61
//
Query:       MMETSP1325-20131115|6294_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       761  (0.0556612); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.37s 00:00:01.00 Elapsed: 00:00:00.60
# Mc/sec: 1086.35
//
Query:       MMETSP1325-20131115|6296_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       84  (0.00614394); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6295_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00018   21.2   0.1    0.00028   20.6   0.0    1.2  1  PF08547.7  Complex I intermediate-associated protein 30 (CIA30)
     0.0063   16.3   0.0       0.01   15.7   0.0    1.3  1  PF02254.13 TrkA-N domain


Domain annotation for each model (and alignments):
>> PF08547.7  Complex I intermediate-associated protein 30 (CIA30)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   4.1e-08   0.00028      11      47 ..     116     152 ..     105     168 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 4.1e-08
   PF08547.7  11 kwtavnDkvmGGlSksslelskedktavFsGnlslen 47 
                 +w +++D vmGG+S ssl + +++++ +++G++  e+
  MMETSP1325-20131115|6295_1 116 EWGSLDDVVMGGVSWSSLMILNATEQSMLEGQIRFEK 152
                 6*******************98889*******98874 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.5e-06      0.01      41      71 ..      20      51 ..       9      60 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.5e-06
                -.-EEEE--TTSHHHHHHTT-----EEEE--S CS
  PF02254.13 41 g.levvvgdatdeevLeeagieeadaviaatg 71
                g l++vv+d t++++L +a  +++ a+i++t 
  MMETSP1325-20131115|6295_1 20 GgLDIVVADITKPSTLSRAAFKDVSAIIVTTA 51
                3489**************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 880.20
//
Query:       MMETSP1325-20131115|6297_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|6299_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.24    9.8   3.0       0.32    9.4   2.1    1.2  1  PF03601.9 Conserved hypothetical protein 698


Domain annotation for each model (and alignments):
>> PF03601.9  Conserved hypothetical protein 698
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.1   2.4e-05      0.32     113     157 ..      63     107 ..      57     118 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 2.4e-05
   PF03601.9 113 klalLvaaGssiCGasAilavepvikareeevalaiavivllgtv 157
                 k a L+aaG s+    A++a ++++ a ++e+  a+a +    +v
  MMETSP1325-20131115|6299_1  63 KWAELAAAGASVSDTDAVAAPANATPAATSETDSAVASVSETDAV 107
                 6789*********************************99765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       462  (0.0337917); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 611.32
//
Query:       MMETSP1325-20131115|6300_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        8.9    6.0   8.8         14    5.3   5.4    1.8  1  PF09719.5 Putative redox-active protein (C_GCAxxG_C_C)


Domain annotation for each model (and alignments):
>> PF09719.5  Putative redox-active protein (C_GCAxxG_C_C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.4    0.0011        14      31      49 ..      29      48 ..      24      58 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0011
   PF09719.5 31 gGvg.lagetCGaltGavma 49
                 G   + +++CGa++G++m+
  MMETSP1325-20131115|6300_1 29 SGADcTDEGVCGAVSGMAML 48
                566656789*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|6302_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|6304_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.002   17.7   0.1     0.0048   16.6   0.0    1.6  2  PF07719.12 Tetratricopeptide repeat
     0.0063   15.9   0.1      0.027   13.9   0.1    1.8  2  PF00515.23 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.031   13.8   0.0      0.034   13.6   0.0    1.1  1  PF13414.1  TPR repeat
      0.041   14.3   0.0       0.26   11.9   0.0    1.8  2  PF13428.1  Tetratricopeptide repeat
       0.12   12.9   0.0       0.14   12.7   0.0    1.0  1  PF13432.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.96   2.6e+03      25      33 ..      15      23 ..      13      24 .. 0.73
   2 !   16.6   0.0   1.7e-06    0.0048       3      32 ..      27      56 .]      25      56 .] 0.93

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.96
                HHHHHH-TT CS
  PF07719.12 25 ekAleldPn 33
                ++Al  +P+
  MMETSP1325-20131115|6304_1 15 DQALTTYPD 23
                688888886 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 1.7e-06
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldP 32
                ++++ G+a+  + d+e+A+ +++  l+ +P
  MMETSP1325-20131115|6304_1 27 LYMMAGQACTVKEDLEKARTYYQNGLRRCP 56
                78999*********************9988 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.29   7.9e+02      25      34 .]      15      24 ..      14      24 .. 0.76
   2 !   13.9   0.1   9.9e-06     0.027       7      32 ..      31      56 .]      26      56 .] 0.88

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.29
                HHHHHHHTTH CS
  PF00515.23 25 ekALelnPnn 34
                ++AL+ +P++
  MMETSP1325-20131115|6304_1 15 DQALTTYPDF 24
                5788888886 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 9.9e-06
                HHHHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23  7 lGnaylklgkydeAleyyekALelnP 32
                 G+a+  ++++++A  yy+  L+  P
  MMETSP1325-20131115|6304_1 31 AGQACTVKEDLEKARTYYQNGLRRCP 56
                599*******************9887 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.2e-05     0.034      27      69 .]      15      56 .]      12      56 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.2e-05
   PF13414.1 27 ekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                ++Al   p+  +ly   ++a   +  d e+A+++y+  l++ P
  MMETSP1325-20131115|6304_1 15 DQALTTYPDFDKLYMMAGQACTVKE-DLEKARTYYQNGLRRCP 56
                7999999999999999999999986.78999999999888766 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.012        32      24      44 .]      14      34 ..      12      34 .. 0.89
   2 ?   11.9   0.0   9.4e-05      0.26       3      32 ..      27      56 .]      25      56 .] 0.93

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.012
   PF13428.1 24 lrralalaPddaealllLarl 44
                 ++al ++Pd + ++++ +++
  MMETSP1325-20131115|6304_1 14 IDQALTTYPDFDKLYMMAGQA 34
                689************999985 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 9.4e-05
   PF13428.1  3 allalarallalGdpdeAiallrralalaP 32
                ++++ ++a+   +d+++A+ +++  l+++P
  MMETSP1325-20131115|6304_1 27 LYMMAGQACTVKEDLEKARTYYQNGLRRCP 56
                789999**********************99 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     5e-05      0.14      19      61 ..      13      55 ..      12      56 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5e-05
   PF13432.1 19 aleaalalaPeaaeallllaeallrlgrldeAaallraalala 61
                ++++al  +P+    ++  ++a+  + +l++A+ +++  l++ 
  MMETSP1325-20131115|6304_1 13 LIDQALTTYPDFDKLYMMAGQACTVKEDLEKARTYYQNGLRRC 55
                5799********************************9877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|6301_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1059.93
//
Query:       MMETSP1325-20131115|6303_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 528.18
//
Query:       MMETSP1325-20131115|6305_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 694.45
//
Query:       MMETSP1325-20131115|6307_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        90  (0.0065828); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.49
# Mc/sec: 317.88
//
Query:       MMETSP1325-20131115|6306_1  [L=307]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-51  175.2   0.6    1.9e-51  175.0   0.4    1.0  1  PF04547.7 Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.0   0.4   1.4e-55   1.9e-51     254     451 ..       2     191 ..       1     192 [. 0.91

  Alignments for each domain:
  == domain 1    score: 175.0 bits;  conditional E-value: 1.4e-55
   PF04547.7 254 llqnitevllPylkerlrkvkvkekkeeksedesekeeeekesleqaekeselqtyevs.gtfddylemviqfGyvvLFsaafPlapllalinniieirsdafklltelrRpvpqraesIGqWqkilellgvlavitNafliaftsdgqlqrllndlslaarlllvvvlehvvlllkyliavlipdipewvreelkree 451
                 +++ni ev  P lke+  ++k++ + + +          ++esl+ +e+++ +++y+   ++f+dylemv+qfGy +LFsaafPlap+lal+nn +eir+da+k++ + +R  p+ ae+IG+Wq ++e++ v+a++tN++li+ft +    ++ ++++  a+  +++++eh++l++k ++ +++ d+pe v+++l+r e
  MMETSP1325-20131115|6306_1   2 VVSNIVEVGKPALKEYKANLKARAADDGEL---------SDESLTAVEEQFVKPKYDILhDLFQDYLEMVLQFGYATLFSAAFPLAPVLALVNNHVEIRIDAWKITSTQQRVYPKGAEDIGTWQSVMEIICVFAIMTNCALIVFTGNYLEFEYPEEKLFVAQCTVFFMCEHFLLIMKGVLMMVVDDVPEAVKIQLARTE 191
                 578999999999999977776666655555.........7999**************8779************************************************************************************65444455556788899**********************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 1599.31
//
Query:       MMETSP1325-20131115|6311_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.6e-12   44.0   0.4      0.067   13.1   0.0    5.2  5  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.1   0.0    0.0087   1.2e+02      13      23 ..      49      59 ..      46      60 .. 0.90
   2 !   11.1   0.0   2.2e-05       0.3       1      23 [.      62      84 ..      62      85 .. 0.96
   3 ?    0.9   0.0     0.043   5.9e+02       4      23 ..     114     133 ..     111     134 .. 0.85
   4 !    8.5   0.0   0.00015       2.1       1      24 []     136     160 ..     136     160 .. 0.85
   5 !   13.1   0.0   4.9e-06     0.067       1      24 []     162     185 ..     162     185 .. 0.95

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.0087
   PF13516.1 13 qigdeGlsaLa 23
                +i+d G++aLa
  MMETSP1325-20131115|6311_1 49 GITDVGAKALA 59
                69********8 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 2.2e-05
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaLa 23
                ++ L++ +L+++ ++d G++aLa
  MMETSP1325-20131115|6311_1 62 CPDLEVVHLNQTLVSDAGAQALA 84
                999*******************8 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.043
   PF13516.1   4 LtsLdLsnNqigdeGlsaLa 23 
                 Lt++++ + +++de ++ L+
  MMETSP1325-20131115|6311_1 114 LTEIHIAKLGVTDENIQELS 133
                 89999999999**9998886 PP

  == domain 4    score: 8.5 bits;  conditional E-value: 0.00015
   PF13516.1   1 lknLtsLdLsnNq.igdeGlsaLan 24 
                 ++ L+   L++N+ i+d G++aLa+
  MMETSP1325-20131115|6311_1 136 CPGLSRVGLGGNDgISDSGVKALAS 160
                 66777778999*77*********95 PP

  == domain 5    score: 13.1 bits;  conditional E-value: 4.9e-06
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLan 24 
                 +++ t+  L n+ +gd+G+ aLa+
  MMETSP1325-20131115|6311_1 162 CPKMTHVYLDNTSVGDDGVLALAS 185
                 999*******************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1107.12
//
Query:       MMETSP1325-20131115|6312_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 630.88
//
Query:       MMETSP1325-20131115|6315_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 582.64
//
Query:       MMETSP1325-20131115|6317_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6319_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.41s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 778.82
//
Query:       MMETSP1325-20131115|6314_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.063   13.0   8.7         11    5.9   0.3    4.0  4  PF00400.27 WD domain, G-beta repeat
        3.7    8.2   9.1        2.6    8.7   5.2    1.5  2  PF08576.5  Eukaryotic protein of unknown function (DUF1764)


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.3    0.0017        11      22      39 .]       4      21 ..       1      21 [. 0.88
   2 ?    5.4   0.0    0.0024        16       9      38 ..      94     122 ..      92     122 .. 0.84
   3 ?    4.2   0.1    0.0054        37       3      39 .]     129     166 ..     127     166 .. 0.84
   4 ?   -0.2   0.0      0.14   9.6e+02      15      30 ..     186     201 ..     177     209 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0017
                SSTEEEEEETTSEEEEEE CS
  PF00400.27 22 dgpllasgSrDgtirlWd 39
                +g+++as S Dg    Wd
  MMETSP1325-20131115|6314_1  4 TGNHCASVSTDGQMLWWD 21
                699*********999998 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0024
                 SSSSSEEEEEEESS.STEEEEEETTSEEEEE CS
  PF00400.27   9 gHtspVtcvafspd.gpllasgSrDgtirlW 38 
                 +H +p++++  +p+  +++ + ++  t r+W
  MMETSP1325-20131115|6314_1  94 HH-GPIYAIERNPThNKFFMTVGD-WTARIW 122
                 45.***********7777777777.****** PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.0054
                 EEEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27   3 ckatlrgHtspVtcvafspd.gpllasgSrDgtirlWd 39 
                 ++ t + H++  t+ ++sp+   +++    Dg + +Wd
  MMETSP1325-20131115|6314_1 129 PIMTTKYHSAYLTSGCWSPTrAGVFFVTRMDGVVDIWD 166
                 677888899***********988888888888888887 PP

  == domain 4    score: -0.2 bits;  conditional E-value: 0.14
                 EEEEEESSSTEEEEEE CS
  PF00400.27  15 tcvafspdgpllasgS 30 
                 +c+a+s    +l+s +
  MMETSP1325-20131115|6314_1 186 SCIAVSNQAGRLVSVG 201
                 8999999966666665 PP

>> PF08576.5  Eukaryotic protein of unknown function (DUF1764)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0         2   1.4e+04      65      77 ..      76      88 ..      73      89 .. 0.65
   2 ?    8.7   5.2   0.00038       2.6       9      82 ..     220     295 ..     214     306 .. 0.78

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 2
   PF08576.5 65 krrrtedGlpvys 77
                k ++ ++G  vy+
  MMETSP1325-20131115|6314_1 76 KSKKQNNGITVYD 88
                5667777777775 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00038
   PF08576.5   9 ekeekkdidaifseakkkekkkkekaee..kakkpkatkkkkkkkkkkeekkeveeekkrrrtedGlpvyseeeLk 82 
                 +++ek  i+++f+  +k+ek+ + ++++  +ak+ +a+ +++++ +kk+ k+e+ ee  r+  +d l+ ++e+e  
  MMETSP1325-20131115|6314_1 220 QANEKTAISNMFDRETKQEKNLEVRERDlkRAKAAEAEARNRESADKKDGKDEKMEELLRKVDADFLAMIKEAEDD 295
                 56789999**********99999888877555555555578888999999999999999**999999999986644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1045  (0.0764336); expected 273.4 (0.02)
Passed bias filter:                      491  (0.0359128); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.40s 00:00:01.07 Elapsed: 00:00:00.59
# Mc/sec: 1259.10
//
Query:       MMETSP1325-20131115|6318_1  [L=439]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-22   80.6   2.0    1.2e-22   80.5   0.3    1.9  2  PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold
    1.3e-06   28.0   0.3    6.2e-06   25.8   0.0    2.1  2  PF02894.12 Oxidoreductase family, C-terminal alpha/beta domain
    5.9e-05   23.3   0.3    0.00016   21.9   0.2    1.8  1  PF03447.11 Homoserine dehydrogenase, NAD binding domain
     0.0004   19.1   0.4     0.0007   18.3   0.3    1.3  1  PF02423.10 Ornithine cyclodeaminase/mu-crystallin family
    0.00053   19.7   1.0     0.0014   18.4   0.1    2.1  2  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
     0.0043   17.2   0.1      0.012   15.9   0.0    1.7  1  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
     0.0065   16.8   0.0      0.019   15.3   0.0    1.8  1  PF08241.7  Methyltransferase domain
  ------ inclusion threshold ------
      0.021   14.7   0.0      0.052   13.4   0.0    1.6  1  PF13659.1  Methyltransferase domain
       0.12   12.8   1.6          9    6.8   0.0    2.9  3  PF13459.1  4Fe-4S single cluster domain
       0.13   12.2   0.9        0.2   11.6   0.1    1.7  2  PF01488.15 Shikimate / quinate 5-dehydrogenase


Domain annotation for each model (and alignments):
>> PF01408.17  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.5   0.3   8.5e-26   1.2e-22       2     112 ..      24     135 ..      23     148 .. 0.91
   2 ?   -3.0   0.0       6.6     9e+03      26      42 ..     391     407 ..     369     428 .. 0.67

  Alignments for each domain:
  == domain 1    score: 80.5 bits;  conditional E-value: 8.5e-26
                 EEEEE----HHHHHHHHHHHCHCSEEEEEEEGSSHCCHHHH.HHHCTHHCCSSHHHHHHSTT-SEEEE-S-GGGHHHHHHHHHHTT-.EEEEESSS-SSHHHHHHHHHHHHHH CS
  PF01408.17   2 rvgivGaGkigsrhlrplnesqrreelvalvdpdperaeav.aesfgveaysdleelledpkidavivatpngthadlalaaleagk.hvllEKPlattveeakelvelaekk 112
                  vgi+G G +g +h+++++   +++++v ++d+d+++ + + +e  ++ +++d+e ll+d+ +d+++v+tpn+ h ++ ++a+   + h+l+EKPl+ttve ++e++el++++
  MMETSP1325-20131115|6318_1  24 GVGIIGSGVMGLEHMQNIKLL-ENARVVMVADTDENSRQLAaKECPEARVVEDYEVLLADESVDVIVVCTPNCHHIHVLRKAIPSRVrHILVEKPLCTTVEHCQEVAELVAEH 135
                 59*******************.9***********987777636667777************************************************************9987 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 6.6
                 EEEEEEEGSSHCCHHHH CS
  PF01408.17  26 eelvalvdpdperaeav 42 
                 +e++al+d+  +++  +
  MMETSP1325-20131115|6318_1 391 QEVMALIDSTGPASAGA 407
                 36777777776666554 PP

>> PF02894.12  Oxidoreductase family, C-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         1   1.4e+03      48      85 ..      95     132 ..      82     146 .. 0.74
   2 !   25.8   0.0   4.5e-09   6.2e-06       4      80 ..     163     238 ..     161     265 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 1
                 HHHHHHHHHHHT-EEEEEEEEE-SCEECTCCCECCCE. CS
  PF02894.12  48 iHdiDllqwLfGeppsvvaalgrqrqvaeateledaav 85 
                 +H+i++l+   +++++      + ++++e++++    v
  MMETSP1325-20131115|6318_1  95 CHHIHVLRKAIPSRVRHILVEKPLCTTVEHCQEVAELV 132
                 79999999999998888888888888887776665554 PP

  == domain 2    score: 25.8 bits;  conditional E-value: 4.5e-09
                 HHTTGG--SSEEEEEEEEEEECCSCHHCTTSSC.CHHCHHCCTTCHHHHHHHHHHH.T-EEEEEEEEE-SCEECTCCCE CS
  PF02894.12   4 iengklGevvsvsvwflddragrpskkrwkrra.kkggGvlgdlgiHdiDllqwLf.Geppsvvaalgrqrqvaeatel 80 
                 ++ng++G++++v+  ++++r++   k++ ++r  +++gG+l+++++H+ Dl++ ++ G+  ++v+a+g  ++v++ +e 
  MMETSP1325-20131115|6318_1 163 VDNGEVGKLHMVH--IREHRFPFLLKVGNWNRFaENTGGTLVEKCCHFWDLMRRILqGAKAVRVYATG-GMDVNHIGET 238
                 79**********6..66666666666665544468*****************9777155555566665.5888888775 PP

>> PF03447.11  Homoserine dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.2   1.1e-07   0.00016       1      70 [.      24      95 ..      24     135 .. 0.82

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1.1e-07
                -------HHHHHHHH---S..SEEEEEEEEESSEEE-TTHHHHHT--CB---HHHHHHHHS-EEEEE-S--T CS
  PF03447.11  1 GlGaiGsallellkrqqee..iplelvavadrdsllskarkallgdeavtldlddlvadlrvdvvVEcasse 70
                G+G iGs+++ l   q  +   ++++v vad d+  ++ ++++ ++++v++d + l+ad+ vdv+V c++  
  MMETSP1325-20131115|6318_1 24 GVGIIGSGVMGLEHMQNIKllENARVVMVADTDENSRQLAAKECPEARVVEDYEVLLADESVDVIVVCTPNC 95
                99*******987777776688************6666679999*************************9865 PP

>> PF02423.10  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.3   5.1e-07    0.0007     132     212 ..      25     103 ..      17     136 .. 0.89

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 5.1e-07
                 B--B----HHHHHHHHHHHHS----EEE--SSCHHHHHHHHHHH..H----EEE-THHHHTSSSEEEE----SS..-SB-C CS
  PF02423.10 132 laiiGaGvqaetqlealsavlpieeiriydideeaaekfaenvqefefevvavksaeeavegadivvTvTaakeaapilka 212
                 ++iiG Gv++  +++ ++++ +++ + + d de+ ++  a+++ e  ++vv+  ++  a e  d++v +T++ ++  +l +
  MMETSP1325-20131115|6318_1  25 VGIIGSGVMGLEHMQNIKLLENARVVMVADTDENSRQLAAKECPE--ARVVEDYEVLLADESVDVIVVCTPNCHHIHVLRK 103
                 79*****************************************96..9***********************9886566665 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1     1e-06    0.0014       4      72 ..      25      99 ..      22     115 .. 0.80
   2 ?   -1.1   0.1      0.98   1.3e+03      51      64 ..     348     365 ..     317     438 .. 0.51

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1e-06
                BEEB-------HHHHHH.HH---EEEE--SSHHHHHHHHHTT...EEE-SSHHHHHHHB..SEEEE-SSSHHHHH CS
  PF03446.10  4 igfiGlGvMGspmalnl.lkagyevavynrtkekveelvaeg...akaaesieelvasl..dvvilmvkagkavd 72
                +g+iG GvMG + ++n+ l ++ +v+++  t e+ ++l+a++   a+++e+ e l+a+   dv++++ ++ +++ 
  MMETSP1325-20131115|6318_1 25 VGIIGSGVMGLEHMQNIkLLENARVVMVADTDENSRQLAAKEcpeARVVEDYEVLLADEsvDVIVVCTPNCHHIH 99
                89********999999964566666666667788888888877889999999987765556******99988765 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.98
                 HHHHHHHB....SEEEE- CS
  PF03446.10  51 ieelvasl....dvvilm 64 
                 +e++v+++    d+v+++
  MMETSP1325-20131115|6318_1 348 LEAFVNAVqnggDAVVTI 365
                 444444444333333332 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   8.4e-06     0.012       2      90 ..      25     113 ..      24     116 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 8.4e-06
  PF03807.12   2 igiiGaGnigealakglaaagaqkheviiaasrspekaeelaeelg.vkvtavsneeaae...eadvvilavkpedveevlaelkealkgklv 90 
                 +giiG+G +g   ++++      + +v+++a+ ++++++ +a+e   ++v++    e++    + dv++++ +  ++  vl+++  +  ++++
  MMETSP1325-20131115|6318_1  25 VGIIGSGVMGLEHMQNIKLLE--NARVVMVADTDENSRQLAAKECPeARVVE--DYEVLLadeSVDVIVVCTPNCHHIHVLRKAIPSRVRHIL 113
                 79********88887776665..46777787999999999999987544444..44433224599****************998555555555 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.4e-05     0.019      17      80 ..      41     105 ..      23     113 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.4e-05
   PF08241.7  17 r....paarvtgvDlseemlatakerlkeeglelvvadaeelpfednsfDvv.vssevlehledpekal 80 
                      +a+ v+  D++e++ + a ++ +e     vv+d e l ++d+s+Dv+ v++  ++h++ ++ka+
  MMETSP1325-20131115|6318_1  41 IklleNARVVMVADTDENSRQLAAKECPEA---RVVEDYEVL-LADESVDVIvVCTPNCHHIHVLRKAI 105
                 1445446788899*****999999999998...688888888.9******6649999999998888876 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.8e-05     0.052       9     107 ..      28     134 ..      21     137 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.8e-05
   PF13659.1   9 cGsGtfllaalel...l..aalllgvEldpraaalaarnlaraglaervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrd................lydafleaaarllkp 107
                  GsG++ l  +++   l  a  + +++ d+++ +laa+++++a++          ++d++ ll ++s+d++v   P +++ +    lr+                ++ +++++ a+l+++
  MMETSP1325-20131115|6318_1  28 IGSGVMGLEHMQNiklLenARVVMVADTDENSRQLAAKECPEARV----------VEDYEVLLADESVDVIVVCTPNCHHIH---VLRKaipsrvrhilvekplcTTVEHCQEVAELVAE 134
                 68999999888886643744556667****************988..........455666689**************7733...33333445566677777777777777777777765 PP

>> PF13459.1  4Fe-4S single cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0066         9      39      60 ..      48      69 ..      32      72 .. 0.77
   2 ?    4.1   0.0     0.046        62       1      21 [.     112     132 ..     112     146 .. 0.86
   3 ?   -3.3   0.0       9.4   1.3e+04      14      43 ..     267     291 ..     263     299 .. 0.51

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0066
   PF13459.1 39 gegevpddleedaqeAadaCPv 60
                    v+d++e+  q Aa++CP+
  MMETSP1325-20131115|6318_1 48 RVVMVADTDENSRQLAAKECPE 69
                334799***************7 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.046
   PF13459.1   1 vfvDrdtCigcgaCvelapdv 21 
                 + v++ +C++ + C e+a+ v
  MMETSP1325-20131115|6318_1 112 ILVEKPLCTTVEHCQEVAELV 132
                 6799************99754 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 9.4
   PF13459.1  14 Cvelapdvfeldedgkarvlvddqegegev 43 
                 C +l+   f+ d +   +v+v +++  g++
  MMETSP1325-20131115|6318_1 267 CLDLC--MFAEDRQ-HEEVHVVGST--GKI 291
                 55554..3555544.4556665443..444 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00015       0.2      14      88 ..      24      97 ..      13     132 .. 0.75
   2 ?   -3.3   0.0       5.7   7.9e+03      52     104 ..     376     395 ..     360     402 .. 0.50

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00015
                EEEEE----HHHHHGGG--TTT-E.EEE----HHHHHHHHHHH...T-EE---S-HHHHHHT-SEEEE-S--SS- CS
  PF01488.15 14 kvlviGAGemarlvakhLlekgvkkiviaNRtaekakeLaeelggeevealpleeleellaeadvvisatsapep 88
                 v +iG G m+ + +++++  + +++v +  t e+ ++La++    e+++++  e+  + + +dv++ +t   ++
  MMETSP1325-20131115|6318_1 24 GVGIIGSGVMGLEHMQNIKLLENARVVMVADTDENSRQLAAKEC-PEARVVEDYEVLLADESVDVIVVCTPNCHH 97
                578****************9977778877888888899887762.43566666666678899*****99876655 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 5.7
                 HHHHH...T-EE---S-HHHHHHT-SEEEE-S--SS-SB-GGG-----....E CS
  PF01488.15  52 Laeelggeevealpleeleellaeadvvisatsapepiiekeaveeakkklgl 104
                 +a+el+ +e ++++++e+                                   
  MMETSP1325-20131115|6318_1 376 VAAELSIKEKRVVEMQEVM---------------------------------A 395
                 3333333333444444433.................................3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.74u 0.40s 00:00:01.14 Elapsed: 00:00:00.51
# Mc/sec: 2062.75
//
Query:       MMETSP1325-20131115|6322_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.042   13.5   1.9      0.056   13.2   1.3    1.1  1  PF02218.10 Repeat in HS1/Cortactin


Domain annotation for each model (and alignments):
>> PF02218.10  Repeat in HS1/Cortactin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.3   4.1e-06     0.056      22      36 ..      28      42 ..      27      43 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.1e-06
  PF02218.10 22 YqgklekHeSqkDys 36
                ++gk++ HeSq+D s
  MMETSP1325-20131115|6322_1 28 HEGKVDEHESQQDKS 42
                89***********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|6326_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 282.77
//
Query:       MMETSP1325-20131115|6328_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|6329_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 1025.64
//
Query:       MMETSP1325-20131115|6330_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.46
# Mc/sec: 411.55
//
Query:       MMETSP1325-20131115|6333_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   13.0   0.6      0.065   12.6   0.4    1.2  1  PF12620.3 Protein of unknown function (DUF3778)


Domain annotation for each model (and alignments):
>> PF12620.3  Protein of unknown function (DUF3778)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.4   4.7e-06     0.065       6      45 ..      17      57 ..      12      61 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.7e-06
   PF12620.3  6 kvgwslkpssllflvS.sihvefvvRVElrpslqlrsaGlq 45
                + ++s+++  +l+  S s hv+ ++R+ ++p + l ++G +
  MMETSP1325-20131115|6333_1 17 RRSCSVSAGASLLADSiSAHVRALIRLSRPPTVWLTLSGNH 57
                67999999999999999***********9999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|6334_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-07   30.8   1.3    2.7e-07   30.5   0.9    1.2  1  PF03144.20 Elongation factor Tu domain 2


Domain annotation for each model (and alignments):
>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.9   1.9e-11   2.7e-07       1      42 [.      39      75 ..      39      76 .] 0.94

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 1.9e-11
                EEEEEEEEEE--EETTEEEEEET.TTCTEEEEEEEEEEEEETT CS
  PF03144.20  1 GtvatgrvysGtlkkGdtvrilg.ndtskkeivtrvrsletfn 42
                Gtv  grv++Gt+k G+ v +++   t      t+v+s+e+++
  MMETSP1325-20131115|6334_1 39 GTVPVGRVETGTIKGGMVVTFAPaGVT------TEVKSVEMHH 75
                9********************997766......*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 350.24
//
Query:       MMETSP1325-20131115|6331_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.3e-15   54.2   1.2    9.9e-15   53.9   0.8    1.1  1  PF06990.6 Galactose-3-O-sulfotransferase
    2.4e-07   30.5   0.7    3.2e-07   30.1   0.5    1.1  1  PF03567.9 Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF06990.6  Galactose-3-O-sulfotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.8   1.4e-18   9.9e-15     147     312 ..       2     170 ..       1     190 [. 0.75

  Alignments for each domain:
  == domain 1    score: 53.9 bits;  conditional E-value: 1.4e-18
   PF06990.6 147 tdtvyvtilrePaallessfsyykqyvPafrkvpaadleaflraPeayydasehravyaknllffdlGyd.......nerdprseeayvrerileverrfrlvli.aeyldeslvllrrllaWelddvlyfklnaraassvar..lsaelaeraraWnaldarlyehfnatlWrkv 312
                 +++ y++ilreP+  + s+f++ +++   +r +       f+ a +a   + +  + + +n+ +   G+d        e+d+ ++ea+  +ril   r  ++v++ ++ ++eslvll  l++W+l  v +  +  r +s+       +  aer r+ n++d+rly+h+   + + +
  MMETSP1325-20131115|6331_1   2 PNARYISILREPVSRFVSLFNFVGTVRDRYRTAER-----FVDALRAKQLPLQDANSFCNNMAWVVSGQDpsdtlayIETDAAADEAF--SRILATLRSHNVVMLmNDRMEESLVLLAYLMRWDLSAVRFKDMTERVQSQKKYqcKEGTCAERIRSCNTVDQRLYDHYRLVFEALL 170
                 5889**********************999988766.....555555555666666777777777777766222222245666677754..6788888999888762689*******************999999998876544114566788***************988776555 PP

>> PF03567.9  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.5   4.7e-11   3.2e-07      79     248 ..       4     167 ..       1     169 [. 0.74

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 4.7e-11
   PF03567.9  79 yfkfifvRdPfeRllSayrnkcvgdkrrgatwcgrlivckgrlpacyegd.dwsgvsfeeFleclsnla.perer..nnrhwap...acdlctrmladydlvgcyetleedlnailrllallnlknvavfgltefprktqtanttrrsnstrasevevdlseklrqrleelYelDfe 248
                  ++++++R+P++R++S ++++ + ++r   +  +++ v  +r     +++  ++  sf + + +++  + p+ +   +++ +a    ++++    l   ++v+ +++  e++  +l++l +  l +v+++ +te  +   ++ +++ ++ t a+++  + ++++ qrl++ Y+l fe
  MMETSP1325-20131115|6331_1   4 ARYISILREPVSRFVSLFNFVGTVRDR---YRTAERFVDALR----AKQLpLQDANSFCNNMAWVVSGQdPSDTLayIETDAAAdeaFSRIL-ATLRSHNVVMLMNDRMEESLVLLAYLMRWDLSAVRFKDMTERVQ---SQKKYQCKEGTCAERI--RSCNTVDQRLYDHYRLVFE 167
                 589******************975555...333467777777....6666555568888888888877743333344444433334444444.45668899****************************88888777...4566666677777777..89*************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 967.59
//
Query:       MMETSP1325-20131115|6336_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 381.64
//
Query:       MMETSP1325-20131115|6337_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|6335_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-41  139.7   0.2    4.1e-41  139.0   0.1    1.3  1  PF02777.13 Iron/manganese superoxide dismutases, C-terminal domain
    1.2e-24   86.2   0.1    1.9e-24   85.5   0.1    1.4  1  PF00081.17 Iron/manganese superoxide dismutases, alpha-hairpin domain


Domain annotation for each model (and alignments):
>> PF02777.13  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.0   0.1   5.9e-45   4.1e-41       1     104 [.     133     241 ..     133     243 .. 0.93

  Alignments for each domain:
  == domain 1    score: 139.0 bits;  conditional E-value: 5.9e-45
                 -S----HHHHHHHH---HHHHHHHHHHHHHT------EEEEEETTTTEEEEEE-STTTBGGGTT......EEEEEEE--SGGGTHHHHTTHHHHHHHHHGGGB-HHHHHH CS
  PF02777.13   1 gePkgelaeaieedfGsfdefkeefeaaaaalfgsgWawlvkdkeegklkivktenqdnplleg......ltplltiDvwEHayYldyknarpdyleafwnvvnWdevek 104
                 g+P+ +la+ai+e+fGsf++++eef+aa++++fgsgWawl ++ +++kl+i+kt nqdnpl+eg      + p+l++DvwEHayYldy+n+rp+y++afw+v+nW+ v+ 
  MMETSP1325-20131115|6335_1 133 GKPSAALAKAIDESFGSFEKMQEEFSAASTTVFGSGWAWLCVT-KDKKLAIAKTPNQDNPLMEGsaagavMYPILGLDVWEHAYYLDYQNRRPEYIKAFWSVINWEAVSG 241
                 68****************************************9.9****************998555555579*********************************9975 PP

>> PF00081.17  Iron/manganese superoxide dismutases, alpha-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.5   0.1   2.8e-28   1.9e-24       2      81 ..      46     126 ..      45     127 .. 0.87

  Alignments for each domain:
  == domain 1    score: 85.5 bits;  conditional E-value: 2.8e-28
                 ------SSSTTTTTTTS-HHHHHHHHHTHHHHHHHHHHHHHHCHHHHCCTHHHHHHHHCHHHHHHC.HHHHHHHHHHHHTB CS
  PF00081.17   2 yeLpeLpYaydaLePhisketlelHhdkHhktYvnnlNkalekleeakkkleelilkklekalrnn.agghvnHslfwknl 81 
                 y Lp+LpYaydaLeP i + t++lHhdkHh+ Y++n+Nka+ +++ + + le  +++   + l+ n +gg+ nH+lfw ++
  MMETSP1325-20131115|6335_1  46 YALPPLPYAYDALEPAIGAPTMKLHHDKHHQVYITNANKAVADMKDKPSLLELQTKAIEAGPLARNgGGGAYNHDLFWAEM 126
                 99******************************************9999988877766555666555167899******999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 1352.61
//
Query:       MMETSP1325-20131115|6340_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        3.3    7.4   7.0         11    5.7   4.8    2.0  1  PF01284.18 Membrane-associating domain


Domain annotation for each model (and alignments):
>> PF01284.18  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   4.8    0.0008        11      42      97 ..      22      84 ..       6     120 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0008
  PF01284.18 42 lnfavfvavfsflyalallvlylfk......nkyftsilwplidl.ivdalaallwlvafial 97
                ++f++++a++++++a++ll++ +f+         +++    li + ++d l ++ +l++ +++
  MMETSP1325-20131115|6340_1 22 CGFMTVMAWLGLIAAFVLLAMHAFRlqvtyqLPGLERVVQVLIAVnVLDQLSWIIFLIGVSIV 84
                789999999999999999999999876443322333333333322255666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       590  (0.0431539); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 748.86
//
Query:       MMETSP1325-20131115|6345_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-17   62.0   0.8    4.7e-07   29.3   0.0    3.1  3  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   3.5e-11   4.7e-07       3      39 .]       8      44 ..       6      44 .. 0.94
   2 !   28.1   0.6   8.4e-11   1.1e-06       3      35 ..      50      82 ..      48      84 .. 0.94
   3 ?    1.1   0.0     0.027   3.7e+02       9      22 ..      98     110 ..      91     148 .. 0.82

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 3.5e-11
                EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  3 ckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 ++++++Ht+ V+ ++ +p+g+++a gS+D+ + lW+
  MMETSP1325-20131115|6345_1  8 NVRSIQAHTDNVYTLDMDPTGQFMAVGSKDSLVSLWE 44
                67899*******************************6 PP

  == domain 2    score: 28.1 bits;  conditional E-value: 8.4e-11
                EEEEEESSSSSEEEEEEESSSTEEEEEETTSEE CS
  PF00400.27  3 ckatlrgHtspVtcvafspdgpllasgSrDgti 35
                c+++  +H  +V+ v+fsp g++las+S+D+ i
  MMETSP1325-20131115|6345_1 50 CLRSVGEHGTAVRTVSFSPCGCYLASSSYDHGI 82
                99999*************************976 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.027
                 SSSSSEEEEEEESS CS
  PF00400.27   9 gHtspVtcvafspd 22 
                  H  +++ +a+ p 
  MMETSP1325-20131115|6345_1  98 TH-CGINQLAWRPK 110
                 67.899999*9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 709.86
//
Query:       MMETSP1325-20131115|6342_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-19   67.2  15.1      1e-18   66.9  10.4    1.0  1  PF11700.3  Vacuole effluxer Atg22 like
    2.5e-07   29.6  13.7    2.5e-07   29.6   9.5    1.8  2  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.074   12.6   0.2      0.074   12.6   0.1    2.4  2  PF08592.6  Domain of unknown function (DUF1772)
        0.2    9.8  15.7       0.11   10.7   8.0    1.9  2  PF13347.1  MFS/sugar transport protein
        0.2   11.3   3.4       0.11   12.2   0.4    2.0  2  PF11742.3  Protein of unknown function (DUF3302)
        1.6    7.7   9.7       0.28   10.2   4.2    1.6  2  PF07672.8  Mycoplasma MFS transporter
        8.2    5.5   9.9        2.4    7.2   3.5    2.2  2  PF01595.15 Domain of unknown function DUF21


Domain annotation for each model (and alignments):
>> PF11700.3  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9  10.4   5.2e-22     1e-18     280     474 ..      12     206 ..       9     209 .. 0.91

  Alignments for each domain:
  == domain 1    score: 66.9 bits;  conditional E-value: 5.2e-22
   PF11700.3 280 lkdvllfLvawfllsdgiatvsslavlfaktelgmstaalillsilatlaavlGaflwsalsrrfglktkqtiiaiivlfeliplyGllGfipavlGlqqpwe.....myvlavlyglvlgglssysrsmfseliPrGkeaaFFaLfaitdkgssviGpllvglitdrtgniriaflflavLlllplpllllvdvergrr 474
                 ++ v+l L++ +++  ++ ++s++av+++k el   ++ +++++++  ++++  a++  +   rfg+   +t+i+ ++ + +i +++ + f+  ++   q  e       ++av  g+ +g  ++  +++++++iP+G+ea+  +L+ +  k+ s+  pll+ ++ ++tg++r++++ la+++l++++ + ++d+ ++r+
  MMETSP1325-20131115|6342_1  12 YPYVFLLLIGVMIIDAAFGAFSTIAVTYMKYELDADNTLVTVIILILLVVSLPSAIAARVAMDRFGPF--HTAIITALYMGVITFIAPF-FMNGSTEKAQ--EiarelAPIFAVCWGVGFGVYYPCIQATYTMIIPAGSEAEMMGLYYFCTKVLSWAPPLLFVVFNNWTGEQRAGLWVLAAFFLVGIIPYCMIDLVKARE 206
                 6789***************************************************************8..8888888888899999988.3443433333..2557877789**********************************************************************************999986 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   9.5   1.3e-10   2.5e-07     207     346 ..      13     157 ..       5     163 .. 0.80
   2 ?   -0.4   0.5      0.17   3.4e+02     286     313 ..     166     193 ..     156     205 .. 0.54

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 1.3e-10
  PF07690.11 207 pvlwillialllfffvfsglltllplylqevlglspglllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalglallaftssavwlll.......vlvliGfglglvfptllalasdlappeerGtasglfntag 346
                 p++++lli++ ++ ++f +++t   +y++  l+ + + +l+++++ +l ++++++a+++   +dr+g+  + +++ l + +++++  ++ + s+  ++ +       + v++G+g+g+++p+++a  +  +p+   + ++gl+ ++ 
  MMETSP1325-20131115|6342_1  13 PYVFLLLIGVMIIDAAFGAFSTIAVTYMKYELDAD-N-TLVTVIILILLVVSLPSAIAARVAMDRFGPFHTAIITALYMGVITFIAPFFMNGSTEKAQEIarelapiFAVCWGVGFGVYYPCIQATYTMIIPAGSEAEMMGLYYFCT 157
                 43334777777777788889999999999999999.4.6666568888888888887777777*****8888888888888888888888885555555556777677888********************************9885 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.17
  PF07690.11 286 llaalglallaftssavwlllvlvliGf 313
                 ll++++  +++     +w+l++++l+G+
  MMETSP1325-20131115|6342_1 166 LLFVVFNNWTGEQRAGLWVLAAFFLVGI 193
                 3444444444444445555555555554 PP

>> PF08592.6  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   2.4      0.37   7.2e+02      37      78 ..      51      91 ..      16     116 .. 0.53
   2 ?   12.6   0.1   3.8e-05     0.074      50      88 ..     159     203 ..     132     223 .. 0.78

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.37
   PF08592.6 37 mpvlalltalafaylavaalsgsrgpaarlllaaaaalllgi 78
                ++v++l+ +++ +  a+aa++  ++ ++  ++++ a+++  +
  MMETSP1325-20131115|6342_1 51 VTVIILILLVVSLPSAIAARVAMDRFGPFHTAIITALYMG-V 91
                3333333333323333333333333333333333333333.3 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 3.8e-05
   PF08592.6  50 ylav......aalsgsrgpaarlllaaaaalllgivpvTllanvP 88 
                 +l++      + ++++ g++++ l+++aa  l+gi+p+ ++  v+
  MMETSP1325-20131115|6342_1 159 VLSWappllfVVFNNWTGEQRAGLWVLAAFFLVGIIPYCMIDLVK 203
                 444455555567899***********************9886665 PP

>> PF13347.1  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   8.0   5.6e-05      0.11     226     340 ..      16     138 ..      13     158 .. 0.74
   2 ?    1.1   0.1     0.047        91     164     213 ..     167     219 ..     145     230 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5.6e-05
   PF13347.1 226 llillllvllvllalflsnglmlYyfkyvlgnt.glvkllaligtiaallalplipflakklgkkkifflglaiaiigylllfflst......eniwlllivvvvaglglgata..alvwsmla 340
                 +l+l++++++ + + ++s+ +++Y +ky l +   lv++++li+++++l ++++  ++  ++g  +++++ ++ + ++++++ f+        ++i+  l++++++ +g+g+ +   +  + ++
  MMETSP1325-20131115|6342_1  16 FLLLIGVMIIDAAFGAFSTIAVTY-MKYELDADnTLVTVIILILLVVSLPSAIAARVAMDRFGPFHTAIITALYMGVITFIAPFFMNgstekaQEIARELAPIFAVCWGVGFGVyyPCIQATYT 138
                 789999999999999999999997.78888887579999999999999999999999*****99886666666555555555444445799997777666666666665555550055555555 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.047
   PF13347.1 164 v.....aalgggetsgyrlaavvigilallsflitfigtkerraapekkekklpl 213
                 +     ++ g+++  g  + a+++ +  +  ++i     +e  +a++ k++ ++ 
  MMETSP1325-20131115|6342_1 167 LfvvfnNWTGEQRA-GLWVLAAFFLVGIIPYCMIDLVKARE-MVADTLKNRAVSP 219
                 22345577777666.44444555555555566667777777.5555555555555 PP

>> PF11742.3  Protein of unknown function (DUF3302)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.4   5.7e-05      0.11       8      53 ..      49      94 ..      42     102 .. 0.87
   2 ?   -2.1   0.1       1.6   3.1e+03      20      29 ..     188     197 ..     182     210 .. 0.55

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.7e-05
   PF11742.3  8 vliivvlvlvygvivihdiPyeiakkrnhPhqdaihvaGWvsLftl 53
                 l++v+++++++v +   i   +a  r  P++ ai +a ++ ++t 
  MMETSP1325-20131115|6342_1 49 TLVTVIILILLVVSLPSAIAARVAMDRFGPFHTAIITALYMGVITF 94
                6899999999999999*********************999888875 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.6
   PF11742.3  20 vivihdiPye 29 
                 +++++ iPy 
  MMETSP1325-20131115|6342_1 188 FFLVGIIPYC 197
                 3344444443 PP

>> PF07672.8  Mycoplasma MFS transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   4.2   0.00014      0.28     150     263 ..      23     138 ..       8     142 .. 0.76
   2 ?   -2.5   0.1         1     2e+03      41      56 ..     182     197 ..     160     214 .. 0.63

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00014
   PF07672.8 150 fvlgyvlglv..vlspfnKtiydrkrflvtllalgvvlvliailvayflglgtavglalvlIftFlaGaflWglqsviLilpqeqkeskpkkvgilfgliWGigY.vlytlvdillS 263
                 +++  + g++  +   + K   d  + lvt++ l +++v +   +a+ +++     +   +I +   G++ + + + +++   e  +  +++++ +f+++WG+g+ v y  ++++  
  MMETSP1325-20131115|6342_1  23 MIIDAAFGAFstIAVTYMKYELDADNTLVTVIILILLVVSLPSAIAARVAMDRFGPFHTAIITALYMGVITF-IAPFFMNGSTEKAQEIARELAPIFAVCWGVGFgVYYPCIQATYT 138
                 333333333321445788999999999999999888888888889999999988888889999999999987.89*****************************9455566666555 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1
   PF07672.8  41 viiltvlillifvili 56 
                  ++l+++ l+ +++++
  MMETSP1325-20131115|6342_1 182 LWVLAAFFLVGIIPYC 197
                 3455555555555544 PP

>> PF01595.15  Domain of unknown function DUF21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.2      0.18   3.5e+02      55      78 ..      14      37 ..       8      44 .. 0.79
   2 ?    7.2   3.5    0.0013       2.4      51     142 ..      45     134 ..      36     149 .. 0.74

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.18
  PF01595.15 55 llatlllgntlanillgalatlal 78
                +   ll+g++++  + ga++t+a+
  MMETSP1325-20131115|6342_1 14 YVFLLLIGVMIIDAAFGAFSTIAV 37
                566789999999999999998885 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0013
  PF01595.15  51 nperllatlllgntlanillgalatlalaellgellavllavlvltllilvfgEilPktlalrnperialllapplrvllkllyPlvwllsk 142
                 + +++l+t+++++ l+  l +a+a+ ++++ +g+  ++++ +++   +i++++ ++ ++ ++++++ ia+ lap++ v+  + + + +++ +
  MMETSP1325-20131115|6342_1  45 DADNTLVTVIILILLVVSLPSAIAARVAMDRFGP-FHTAIITALYMGVITFIAPFF-MNGSTEKAQEIARELAPIFAVCWGVGFGVYYPCIQ 134
                 5689******************************.666666666666555555444.56677888888888888888877666655555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       798  (0.0583675); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.62u 0.43s 00:00:01.05 Elapsed: 00:00:01.04
# Mc/sec: 603.70
//
Query:       MMETSP1325-20131115|6346_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.78
# Mc/sec: 298.01
//
Query:       MMETSP1325-20131115|6341_1  [L=517]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-40  137.1   0.0    2.5e-27   95.6   0.0    2.2  2  PF00155.16 Aminotransferase class I and II
  ------ inclusion threshold ------
      0.018   13.9   0.0      0.031   13.2   0.0    1.3  1  PF01041.12 DegT/DnrJ/EryC1/StrS aminotransferase family
      0.032   13.2   0.0      0.065   12.2   0.0    1.4  1  PF01212.16 Beta-eliminating lyase
       0.04   12.0   0.0      0.064   11.4   0.0    1.2  1  PF01053.15 Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.6   0.0   7.3e-31   2.5e-27     125     252 ..       3     131 ..       1     159 [. 0.85
   2 !   39.4   0.0     9e-14   3.1e-10     265     363 .]     199     303 ..     195     303 .. 0.95

  Alignments for each domain:
  == domain 1    score: 95.6 bits;  conditional E-value: 7.3e-31
                 TTTTEE-HHHHHHHHTT--SS-E...EEE-SSS-S-------HHHHHHHHHHHHHTT-EEEEEES-------.-HHHHHHHHHHH-S-EEEEE--CCCCTBGGG----EEEE-........HHHHHHHHHCCTTTS CS
  PF00155.16 125 eedfhldlealeealkeapegnkktkvvlvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavatranveeepnllivgslsKafGlaGeRvGyilgna........avvsqlrklsrpfls 252
                 e d+++d e le ++++      +t+ +lv++p+NP+G++++ + l+++l++a+k++ll+++De+Y+++ f++ ++++ +a + + + +l vg+++K f ++G+RvG+i +n+         +++ l +ls+ +l 
  MMETSP1325-20131115|6341_1   3 ERDWEVDCEVLESLIDD------RTRAILVNNPSNPCGSLFSDQNLKDILAVAEKHKLLIISDEIYGTMTFTGYEFTP-IAALTTTVPVLAVGGMAKMFCVPGWRVGWIMINDrnnvlthgGMRQGLMNLSQLILG 131
                 689**************......*************************************************999999.99999999************************9988666666444445444444444 PP

  == domain 2    score: 39.4 bits;  conditional E-value: 9e-14
                 TSHHHHHHHHHHHHHHHHHHHHHHHHCC.CC.-TCHHHH----EE-----HH............HHHCCH---BE--........---EE-----TTTHHHHHHHH CS
  PF00155.16 265 sdallkqseleemrqrlqkrrkelrdeLael.glkvlasqsgmflltdlsae......takelskkLleevgvyvtpgtsftvpgrlRitvAglteeeleelveal 363
                 sda++++ + +  +  l++ +k+ +d+L+++ gl+v+++ ++m++++ + +       +++ +++ Ll+e+ v v+pg  f++p+++R+ + +++e +l+e+ +++
  MMETSP1325-20131115|6341_1 199 SDAEQMEAFRQHYVGYLEQASKFTTDKLRKApGLSVVEPRGAMYVMVQVHPDsfvdlpDDQVFAQRLLKEEAVFVLPGAAFYAPNFFRVVF-SGPEGKLNEAYDRI 303
                 6778888888999999*****************************************99999*****************************.********999987 PP

>> PF01041.12  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     9e-06     0.031      97     146 ..       4      59 ..       1      61 [. 0.84

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 9e-06
  PF01041.12  97 etlnldpaaieaaitprtkaIl...pVhlyGqpa...dmdairaiaaehglkvieD 146
                  ++ +d + +e++i +rt+aIl   p +  G ++   +++ i a+a++h+l +i D
  MMETSP1325-20131115|6341_1   4 RDWEVDCEVLESLIDDRTRAILvnnPSNPCGSLFsdqNLKDILAVAEKHKLLIISD 59 
                 6899*****************933334567777666679***************99 PP

>> PF01212.16  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.9e-05     0.065     106     164 ..       8      59 ..       2      60 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.9e-05
                 --HHHHHCCSS-..STS..ECEEEEEES-TT-------HHHHHHHHHHHHH---EEEEE CS
  PF01212.16 106 ldleklealikevgaheenialisltitnntaGGqvvsleelreiaeiakeygiplhlD 164
                 +d e le+li+       ++++i++ ++ n  +G++ s ++l+ i ++a+++++ ++ D
  MMETSP1325-20131115|6341_1   8 VDCEVLESLIDD------RTRAILVNNPSNP-CGSLFSDQNLKDILAVAEKHKLLIISD 59 
                 567778888887......699*********5.9*******************9987766 PP

>> PF01053.15  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.9e-05     0.064     129     182 ..       9      64 ..       6      76 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.9e-05
                 CHHHHHHHTTTTEEEEEEESSBTTTTB-...--HHHHHHHHHHCSS-EEEEE-TTTH CS
  PF01053.15 129 dleelekaikpntklvylEtptnpllkv...vDieaiaklakkkgdvlvvvDntfas 182
                 d e le+ i+++t+++++  p+np  ++     +++i+++a+k++ +l++ D  + +
  MMETSP1325-20131115|6341_1   9 DCEVLESLIDDRTRAILVNNPSNPCGSLfsdQNLKDILAVAEKHK-LLIISDEIYGT 64 
                 5678999*****************8776222579**********8.99999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       720  (0.0526624); expected 273.4 (0.02)
Passed bias filter:                      424  (0.0310123); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.89u 0.42s 00:00:01.31 Elapsed: 00:00:00.64
# Mc/sec: 1935.81
//
Query:       MMETSP1325-20131115|6343_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 387.77
//
Query:       MMETSP1325-20131115|6351_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-16   58.1   0.2    8.6e-16   57.8   0.2    1.1  1  PF02543.10 Carbamoyltransferase
  ------ inclusion threshold ------
      0.023   13.8   0.0      0.028   13.5   0.0    1.1  1  PF01300.13 Telomere recombination


Domain annotation for each model (and alignments):
>> PF02543.10  Carbamoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8   0.2   1.3e-19   8.6e-16     296     360 .]       2      66 ..       1      66 [. 0.98

  Alignments for each domain:
  == domain 1    score: 57.8 bits;  conditional E-value: 1.3e-19
  PF02543.10 296 kdrlNekvkResfrPfaPsvleerapeifeldeespyMlivvkvreekrdklpavvHvDgtaRvQ 360
                 kdr+N  + Re+frP+aP+  +e ++ ++ ++  +pyM ++       ++ +pavvH D taR+Q
  MMETSP1325-20131115|6351_1   2 KDRMNRLKVREWFRPVAPVFTYEAREMFVGPEVDTPYMSFAPVLHDAVKESIPAVVHFDATARPQ 66 
                 9*****999*******************************************************9 PP

>> PF01300.13  Telomere recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.2e-06     0.028     101     149 ..      67     120 ..      42     135 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4.2e-06
  PF01300.13 101 GvrlPdhplarlLlealgep.....lvaTSanlsgepsltdaeeveeelgekvd 149
                  vr  d +  +++l ++ge      l+ TS n  g+p+l + +e+ e l++  d
  MMETSP1325-20131115|6351_1  67 TVRATDDAWLHRVLVLVGERmgypiLINTSFNTRGKPILNRVAEALELLQDLED 120
                 5777777777777776666455569********************999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 793.46
//
Query:       MMETSP1325-20131115|6352_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|6354_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.25    9.8   2.6       0.25    9.8   1.8    1.0  1  PF04636.8  PA26 p53-induced protein (sestrin)
       0.44    9.1  19.8       0.51    8.9  13.7    1.0  1  PF10310.4  Protein of unknown function (DUF2413)
        1.1    8.3   6.5        1.4    7.9   4.5    1.1  1  PF06224.7  Protein of unknown function (DUF1006)
        1.3    8.0  15.9        1.5    7.8  11.0    1.1  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)
          2    8.1  19.9        2.4    7.8  13.8    1.1  1  PF06459.7  Ryanodine Receptor TM 4-6
        2.7    7.7  10.1          3    7.6   7.0    1.1  1  PF06217.7  GAGA binding protein-like family
        2.9    6.6   8.6        3.1    6.5   6.0    1.1  1  PF04929.7  Herpes DNA replication accessory factor
        3.6    7.2   7.6        4.1    7.0   5.3    1.2  1  PF02862.12 DDHD domain
        7.2    6.0  27.7        9.7    5.6  19.2    1.3  1  PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5


Domain annotation for each model (and alignments):
>> PF04636.8  PA26 p53-induced protein (sestrin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.8   0.00016      0.25     219     268 ..      78     142 ..      13     155 .] 0.50

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00016
   PF04636.8 219 krkvadra...............tevealmermkkleekredeeasqeelttrfekekkesllvv 268
                 ++++a+++                  +al e+mkk  e+r+++e+ ++e +++  ke    ++  
  MMETSP1325-20131115|6354_1  78 GTAEAEEEedmgdfmaeilaeekAAKKALEEEMKKEAEERKEKETAEKEAAKQAAKEAAAGSKKK 142
                 22222222122222334444443777788888888888877777777777776666555544443 PP

>> PF10310.4  Protein of unknown function (DUF2413)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  13.7   0.00034      0.51       6      99 ..      60     152 ..      57     155 .] 0.60

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00034
   PF10310.4   6 dsLpeekkkkkkkkkskaskkstkkdediLefLdeleksekakkkkkaeeaekaetprvekkkskkkesekaskeekeakprkseeseesseek 99 
                 d+++ ++ +++++  ++a +++++++ed+ +f+ e+ ++eka kk  +ee++k+ ++r ek++++k+  ++a ++e++a ++k++ +++++++k
  MMETSP1325-20131115|6354_1  60 DDVDCTAIAAERAAAGEAGTAEAEEEEDMGDFMAEILAEEKAAKKALEEEMKKEAEERKEKETAEKEAAKQA-AKEAAAGSKKKKSKKKKKKKK 152
                 55566666667788899999******************9998888867777666555544444433333322.222333233322222222222 PP

>> PF06224.7  Protein of unknown function (DUF1006)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.5   0.00092       1.4      85     152 ..      69     132 ..      59     148 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00092
   PF06224.7  85 mapalaaearargldardaaalaaavlerlaaegpltareleaalarr.gwwgwkkpskaskralellf 152
                  ++a a+e   +g ++++ ++++ + ++++ ae+ +++++le++++++ +  ++k++++a k a+ ++ 
  MMETSP1325-20131115|6354_1  69 AERAAAGE---AGTAEAEEEEDMGDFMAEILAEEKAAKKALEEEMKKEaE--ERKEKETAEKEAAKQAA 132
                 33333333...8999999*****************************942..55555566666655554 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  11.0   0.00097       1.5     248     300 ..      99     151 ..      54     154 .. 0.59

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00097
                 XXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX------ CS
   PF09468.5 248 sdlskkreaeedaeaaesraekkrkkeeeekkkkakeskgvkalkkvnasGmk 300
                 ++  kk+  ee  ++ae+r+ek++ ++e +k+  +++++g+k++k + ++++k
  MMETSP1325-20131115|6354_1  99 EKAAKKALEEEMKKEAEERKEKETAEKEAAKQAAKEAAAGSKKKKSKKKKKKK 151
                 44555555555555566666444444444444444455555544444444444 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  13.8    0.0016       2.4      60     143 ..      82     152 ..      49     155 .] 0.48

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0016
   PF06459.7  60 hdaepgLgdvsevepeepptpeeaaaekk..........elkeeeeepkseaekadledgekeekaeeeseekpeeakaakkkaekkkekkaek 143
                  ++e+                                  e+k++++  ++e++k+ +e  eke  ++e  ++ ++ea+a +kk+++kk+kk++k
  MMETSP1325-20131115|6354_1  82 AEEEE-----------------------DmgdfmaeilaEEKAAKKALEEEMKKEAEERKEKETAEKEAAKQAAKEAAAGSKKKKSKKKKKKKK 152
                 22223.......................133334444445566666666666666666666632222222222333333333333333333333 PP

>> PF06217.7  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.0     0.002         3     124     177 ..      99     152 ..      58     155 .] 0.40

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.002
   PF06217.7 124 lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvk 177
                  +  +k  +++++++aee kek++ +k++ ++ +ke  a +kkkks+k+kkk+k
  MMETSP1325-20131115|6354_1  99 EKAAKKALEEEMKKEAEERKEKETAEKEAAKQAAKEAAAGSKKKKSKKKKKKKK 152
                 111222222222222233333333333333333333333333333333333222 PP

>> PF04929.7  Herpes DNA replication accessory factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   6.0     0.002       3.1     323     369 ..     107     152 ..      51     155 .] 0.48

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.002
   PF04929.7 323 ktsesdleeeteeeaslsakpsaalerplasslkrkreaekkkkkkk 369
                 ++++++ +ee +e++ ++++ +++ +++ a+  k+k++++k kkkkk
  MMETSP1325-20131115|6354_1 107 EEEMKKEAEERKEKETAEKEAAKQAAKEAAAGSKKKKSKKK-KKKKK 152
                 22333333333333333333334444443333333333333.22222 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   5.3    0.0027       4.1     110     172 ..     101     150 ..      52     155 .] 0.39

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0027
  PF02862.12 110 sltsslsegiasslrnsslslssedeeseeeseasklsqksksekkkeseeetkeeeeeakke 172
                 + ++ l+e+++++ ++++++++ e+e++++++++  +              ++k++++++kk+
  MMETSP1325-20131115|6354_1 101 AAKKALEEEMKKEAEERKEKETAEKEAAKQAAKEAAA-------------GSKKKKSKKKKKK 150
                 1111111111111111111111111111111111111.............1111111111111 PP

>> PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  19.2    0.0064       9.7     134     197 ..      96     151 ..      68     155 .] 0.52

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0064
                 XXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXX........XXXXXXXX CS
   PF08208.6 134 gseseeseke.ktakkekeaeveeeekkekkkkkevkke....kkekKsKkektekekkkskkkkkkkk 197
                  +e+++ +k  ++++k++++e +e+e  ek+ +k+++ke     k+kKsKk+k             kkk
  MMETSP1325-20131115|6354_1  96 LAEEKAAKKAlEEEMKKEAEERKEKETAEKEAAKQAAKEaaagSKKKKSKKKK-------------KKK 151
                 33333333333555555555555556666666666666632222222222222.............111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2694  (0.197045); expected 273.4 (0.02)
Passed bias filter:                     1033  (0.0755559); expected 273.4 (0.02)
Passed Vit filter:                       243  (0.0177736); expected 13.7 (0.001)
Passed Fwd filter:                        33  (0.00241369); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.77u 0.46s 00:00:01.23 Elapsed: 00:00:00.56
# Mc/sec: 651.64
//
Query:       MMETSP1325-20131115|6355_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.086   11.0   0.0      0.086   11.0   0.0    1.0  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.3e-06     0.086      43     234 ..       2      36 ..       1      54 [. 0.52

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.3e-06
                 HHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHHHHHHHHHHHCTTCTTECCS-EECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTSEEEEES-TTCCHHCTTTHHHHTTT-EEEEESSCCTT-HHHHHHHHHHCT-SEEE- CS
  PF00501.23  43 aclkaGavyvplyptlpaerlayilndseakvlitddelltklleaaskelakekliivrtdkeedsvgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpddrvlsllplhfdgsilellaplllGatvvlvspedlkdpalllddiekykvtvlal 234
                 a+                                                                                                                                                           l +Gatvvl+sp ++  +a+ ld++ +y++t+l++
  MMETSP1325-20131115|6355_1   2 AA-----------------------------------------------------------------------------------------------------------------------------------------------------------LESGATVVLPSPTPD--AAETLDALLNYEATILFA 36 
                 44...........................................................................................................................................................555555555555553..555555555555555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6358_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-10   38.2   3.7    8.3e-10   38.2   2.6    2.1  2  PF00397.21 WW domain
  ------ inclusion threshold ------
      0.033   13.3   0.1      0.033   13.3   0.0    1.2  1  PF10229.4  Uncharacterized conserved protein (DUF2246)


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.7   0.3    0.0073        50      24      31 .]       7      14 ..       4      14 .. 0.81
   2 !   38.2   2.6   1.2e-13   8.3e-10       2      31 .]      13      42 ..      12      42 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0073
                --EESS-- CS
  PF00397.21 24 getqWekP 31
                +  qWe+P
  MMETSP1325-20131115|6358_1  7 QSAQWEPP 14
                677****9 PP

  == domain 2    score: 38.2 bits;  conditional E-value: 1.2e-13
                --SEE.E.E.E----EEEEETTT--EESS-- CS
  PF00397.21  2 ppgWe.ersddddGrvYYyNheTgetqWekP 31
                pp W+  +++d +G vY+yN+eT e+ We+P
  MMETSP1325-20131115|6358_1 13 PPRWVdYVDPD-SGEVYFYNAETDESVWERP 42
                788**555544.6*****************9 PP

>> PF10229.4  Uncharacterized conserved protein (DUF2246)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.9e-06     0.033     205     230 ..      16      42 ..       9      64 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.9e-06
   PF10229.4 205 WaDFidPssGraffgpy.tnatlfetd 230
                 W D++dP sG  +f ++ t+++++e  
  MMETSP1325-20131115|6358_1  16 WVDYVDPDSGEVYFYNAeTDESVWERP 42 
                 **************8761566777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|6361_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 302.70
//
Query:       MMETSP1325-20131115|6362_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.065   12.1   0.2      0.078   11.9   0.1    1.1  1  PF01768.11 Birnavirus VP4 protein
        2.2    8.1   8.5        2.5    7.9   0.3    2.7  2  PF03875.8  Statherin


Domain annotation for each model (and alignments):
>> PF01768.11  Birnavirus VP4 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.1e-05     0.078      27      78 ..      32      82 ..       5      91 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.1e-05
  PF01768.11 27 llgdeasagryvsraAsGkardvserlrslseaadksyslkarLfevpqlpv 78
                +     s +r++sr  sG +r++s r ++ ++ a ++ + +a   + p +p+
  MMETSP1325-20131115|6362_1 32 ISAGAGSFARGTSRVQSGSYRSASAREKDKARVATYGEHEEAAF-QAPINPQ 82
                3334446689***************************9998886.8888886 PP

>> PF03875.8  Statherin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.3   0.00037       2.5      27      39 ..      76      88 ..      55      92 .. 0.80
   2 ?    3.5   1.5    0.0084        58      21      41 ..     106     126 ..     101     127 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00037
   PF03875.8 27 eqPLYPqPYqPyy 39
                + P+ PqP qP y
  MMETSP1325-20131115|6362_1 76 QAPINPQPAQPAY 88
                5799*******76 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.0084
   PF03875.8  21 PYqPvveqPLYPqPYqPyyqq 41 
                  Y P +++P +P P     qq
  MMETSP1325-20131115|6362_1 106 AYAPQPNPPSFPAPNTIAAQQ 126
                 599**********98766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 601.35
//
Query:       MMETSP1325-20131115|6359_1  [L=421]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0081   14.9   0.8      0.014   14.2   0.6    1.4  1  PF09755.4  Uncharacterized conserved protein H4 (DUF2046)
  ------ inclusion threshold ------
      0.022   14.4   0.6      0.062   12.9   0.4    1.8  1  PF04859.7  Plant protein of unknown function (DUF641)
      0.034   13.5   0.1      0.054   12.8   0.1    1.2  1  PF02442.12 Lipid membrane protein of large eukaryotic DNA viruses
      0.077   13.2   0.7       0.18   12.0   0.5    1.7  1  PF06156.8  Protein of unknown function (DUF972)
       0.16   12.2   1.7       0.26   11.5   0.3    2.0  2  PF10824.3  Protein of unknown function (DUF2580)
       0.49   10.2   4.1        1.6    8.6   0.1    3.3  4  PF04508.7  Viral A-type inclusion protein repeat
        6.6    6.3   6.9       0.26   10.9   0.2    2.1  3  PF07544.8  RNA polymerase II transcription mediator complex subunit 9


Domain annotation for each model (and alignments):
>> PF09755.4  Uncharacterized conserved protein H4 (DUF2046)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.6   7.1e-06     0.014     218     295 ..     118     201 ..      54     209 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 7.1e-06
   PF09755.4 218 aeeedtaenlashikalrseverlrknlaksekettekmeqyakee....rsireenirlqr..klkreverrealcrqlsese 295
                  ++   ++ l + +    ++v rl++++++  ++ +ek + y + +    r +r +n  ++r   l+re er   l+ + s+++
  MMETSP1325-20131115|6359_1 118 GSHMSEVSALKRTVANREENVARLKQQVSELTRQLSEKHQMYLQSDatlaRVVRGDNTEFKRiyELNREKERLMGLAHRNSDAK 201
                 34445566777778888899**********************998644447899****999966699*****999999888776 PP

>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.4   3.2e-05     0.062      33      83 ..      99     152 ..      91     190 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.2e-05
   PF04859.7  33 QeAhlPYdpekiqaADkavvaeLkkLselkrlyrrkeakgs...akdailaaei 83 
                 Qe hlPY+     + D++v + + ++s+lkr  ++ e++ +   ++ + l  ++
  MMETSP1325-20131115|6359_1  99 QENHLPYEISRATSIDALVGSHMSEVSALKRTVANREENVArlkQQVSELTRQL 152
                 999*****************************9998888773333333333332 PP

>> PF02442.12  Lipid membrane protein of large eukaryotic DNA viruses
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.8e-05     0.054      17      88 ..      92     164 ..      88     183 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.8e-05
  PF02442.12  17 rilnklaqsasatanqncvihigeisgdvnkncnvsvknlcvsnaslsfallleslkevlnnlpqeqkaav...a 88 
                 r +++l q+ +++  ++ + +i+ + g+ ++  +vs ++++v+n + ++a l + ++e++ +l+++ ++++   a
  MMETSP1325-20131115|6359_1  92 RSIHQLKQENHLPYEISRATSIDALVGSHMS--EVSALKRTVANREENVARLKQQVSELTRQLSEKHQMYLqsdA 164
                 567889999999999999999***9999955..5************************************94443 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.5   9.4e-05      0.18      13      69 ..     113     168 ..     105     210 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9.4e-05
   PF06156.8  13 leeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkkekkkkkk 69 
                 ++  +++ ++e+++lk+++++  e+ a+lk ++++l ++l+e ++    +++++ ++
  MMETSP1325-20131115|6359_1 113 IDALVGSHMSEVSALKRTVANREENVARLKQQVSELTRQLSEKHQ-MYLQSDATLAR 168
                 5666788899********************************988.23333333333 PP

>> PF10824.3  Protein of unknown function (DUF2580)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.7   3.3e+03      37      64 ..      25      52 ..      21      63 .. 0.67
   2 ?   11.5   0.3   0.00013      0.26      53      99 ..     125     171 ..     108     172 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.7
   PF10824.3 37 aaavaathGpicaafnaalaeaeearsa 64
                aaa+++++ +i  +fn + ++a   ++a
  MMETSP1325-20131115|6359_1 25 AAAMLESWNQIREEFNVSTSAAGSLMRA 52
                5677777777777777777766655554 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00013
   PF10824.3  53 aalaeaeearsaagealaaastdlaekLraAaaaYeatDeeaagald 99 
                 +al++ +++r++  ++l+++ ++l ++L    ++Y ++D++ a+ ++
  MMETSP1325-20131115|6359_1 125 SALKRTVANREENVARLKQQVSELTRQLSEKHQMYLQSDATLARVVR 171
                 589999***********************************999876 PP

>> PF04508.7  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       3.1   6.1e+03       2      11 ..     123     132 ..     122     133 .. 0.80
   2 ?    8.6   0.1   0.00083       1.6       5      20 ..     140     155 ..     136     156 .. 0.90
   3 ?    1.1   0.1      0.21   4.1e+02       2      11 ..     182     191 ..     181     193 .. 0.87
   4 ?   -2.3   0.0       2.5   4.9e+03       3      13 ..     327     337 ..     327     337 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 3.1
   PF04508.7   2 EldrlRrkIs 11 
                 E+  l+r++ 
  MMETSP1325-20131115|6359_1 123 EVSALKRTVA 132
                 8999999986 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00083
   PF04508.7   5 rlRrkIsdLekqLsdc 20 
                 rl++++s+L +qLs++
  MMETSP1325-20131115|6359_1 140 RLKQQVSELTRQLSEK 155
                 9************985 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.21
   PF04508.7   2 EldrlRrkIs 11 
                 El+r++++++
  MMETSP1325-20131115|6359_1 182 ELNREKERLM 191
                 99****9986 PP

  == domain 4    score: -2.3 bits;  conditional E-value: 2.5
   PF04508.7   3 ldrlRrkIsdL 13 
                 + r+Rr I +L
  MMETSP1325-20131115|6359_1 327 MSRARRAIQSL 337
                 689**998765 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       5.5   1.1e+04      59      68 ..      92     101 ..      90     103 .. 0.74
   2 ?   10.9   0.2   0.00013      0.26      43      77 ..     120     154 ..     117     159 .. 0.89
   3 ?   -2.8   0.2       2.5   4.9e+03      36      47 ..     326     337 ..     325     337 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 5.5
   PF07544.8  59 aeIeeleeqi 68 
                 + I++l++++
  MMETSP1325-20131115|6359_1  92 RSIHQLKQEN 101
                 5788888887 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00013
   PF07544.8  43 aveelpdisrsveeqeaeIeeleeqiarkrevLkk 77 
                 +++e+  + r+v+++e+ ++ l++q++++++ L++
  MMETSP1325-20131115|6359_1 120 HMSEVSALKRTVANREENVARLKQQVSELTRQLSE 154
                 6889999********************99987765 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 2.5
   PF07544.8  36 rlqkaraaveel 47 
                 r ++ar a+++l
  MMETSP1325-20131115|6359_1 326 RMSRARRAIQSL 337
                 8899****9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1039  (0.0759947); expected 273.4 (0.02)
Passed bias filter:                      698  (0.0510532); expected 273.4 (0.02)
Passed Vit filter:                        93  (0.00680222); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.92u 0.37s 00:00:01.29 Elapsed: 00:00:00.64
# Mc/sec: 1576.35
//
Query:       MMETSP1325-20131115|6363_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|6365_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   11.0   0.0      0.086   10.9   0.0    1.0  1  PF07575.8 Nup85 Nucleoporin


Domain annotation for each model (and alignments):
>> PF07575.8  Nup85 Nucleoporin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   6.3e-06     0.086     344     378 ..      19      54 ..       9      61 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 6.3e-06
   PF07575.8 344 adLlehkglLeeeeqedlg.ginlrelllleyAlvL 378
                 + Lle +++L +e +e+++  +nlr++ll ++A  L
  MMETSP1325-20131115|6365_1  19 VRLLEICEQLGTETEESFPvVENLRHFLLADLAVLL 54 
                 78*****************99************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|6367_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.55
# Mc/sec: 135.07
//
Query:       MMETSP1325-20131115|6368_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.049   13.4   0.9      0.058   13.2   0.6    1.3  1  PF00466.15 Ribosomal protein L10
      0.081   12.0   1.0      0.079   12.0   0.7    1.1  1  PF12063.3  Domain of unknown function (DUF3543)
      0.084   12.7   2.2        0.1   12.4   1.5    1.2  1  PF07334.8  Interferon-induced 35 kDa protein (IFP 35) N-terminus
       0.35   10.4   4.8       0.39   10.3   3.3    1.1  1  PF07926.7  TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> PF00466.15  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.6   1.7e-05     0.058      12      47 ..      17      52 ..       6      56 .] 0.89

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.7e-05
                HHHHHHCTTSEEEEE------HHHHHHHHHHHHHH- CS
  PF00466.15 12 elkellkkyssvlvvdydgltvkqlqelRkelrekg 47
                ++ke+lk+ +s lv + + l++++ ++lR+e r+k 
  MMETSP1325-20131115|6368_1 17 RVKERLKEKESELVSTKEALRAYEDEKLRREARQKV 52
                89*******************************984 PP

>> PF12063.3  Domain of unknown function (DUF3543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.7   2.3e-05     0.079     114     149 ..       1      36 [.       1      54 [. 0.88

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.3e-05
   PF12063.3 114 vqwlrerFnevlekaefvrlkleeaqkrlpedhpsh 149
                 v+ lr++F e+ e+a  v+++l+e +++l ++++ +
  MMETSP1325-20131115|6368_1   1 VNSLRKKFDEMREEAIRVKERLKEKESELVSTKEAL 36 
                 7889***********************999888765 PP

>> PF07334.8  Interferon-induced 35 kDa protein (IFP 35) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.5   2.9e-05       0.1       3      29 ..       9      35 ..       8      50 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.9e-05
   PF07334.8  3 aeiqkenirLkeeiqkLeaELQelkre 29
                +e+ +e ir ke+++  e+EL ++k  
  MMETSP1325-20131115|6368_1  9 DEMREEAIRVKERLKEKESELVSTKEA 35
                6999*****************998876 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.3   0.00011      0.39      69     109 ..       2      42 ..       1      54 [. 0.79

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00011
   PF07926.7  69 aelqkeaselrkeadsakaelneleekweeeksmLevelse 109
                 ++l+k+++e+r+ea   k+ l+e+e +  + k++L+   +e
  MMETSP1325-20131115|6368_1   2 NSLRKKFDEMREEAIRVKERLKEKESELVSTKEALRAYEDE 42 
                 78999999999999999999999999999999988654443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1260  (0.0921592); expected 273.4 (0.02)
Passed bias filter:                      881  (0.0644383); expected 273.4 (0.02)
Passed Vit filter:                       109  (0.0079725); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.48s 00:00:00.85 Elapsed: 00:00:00.56
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6360_1  [L=343]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-15   56.0   2.8    2.1e-15   56.0   2.0    3.3  4  PF05739.14 SNARE domain
    1.6e-10   40.9   3.0    1.9e-09   37.4   0.1    2.4  2  PF00804.20 Syntaxin
     0.0036   16.7   3.4     0.0036   16.7   2.3    2.1  1  PF00015.16 Methyl-accepting chemotaxis protein (MCP) signalling domain
     0.0045   15.0   0.2     0.0073   14.3   0.1    1.3  1  PF01601.11 Coronavirus S2 glycoprotein
  ------ inclusion threshold ------
      0.018   13.4   4.5      0.024   13.0   3.1    1.1  1  PF05667.6  Protein of unknown function (DUF812)
      0.019   13.7   1.6      0.095   11.4   0.1    2.0  2  PF05508.6  RanGTP-binding protein
      0.025   14.4   2.4       0.85    9.4   0.1    2.9  3  PF10392.4  Golgi transport complex subunit 5
      0.049   13.2   0.0        0.1   12.2   0.0    1.5  1  PF03840.9  Preprotein translocase SecG subunit
      0.052   13.3   0.4       0.17   11.6   0.0    2.1  2  PF09871.4  Uncharacterized protein conserved in archaea (DUF2098)


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.7   2.6e+03       6      43 ..      61      70 ..      59      77 .. 0.47
   2 ?    2.3   0.0     0.082   1.2e+02       1      16 [.      97     112 ..      97     113 .. 0.92
   3 ?   -1.7   0.1       1.4   2.1e+03      31      54 ..     138     161 ..     117     170 .. 0.68
   4 !   56.0   2.0   1.4e-18   2.1e-15       1      63 []     220     282 ..     220     282 .. 0.99

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1.7
                HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14  6 leelessigeLkqlfldmgeeveeQgelldrIdnnves 43
                +e++e+++                             +
  MMETSP1325-20131115|6360_1 61 VEQIEADMA----------------------------E 70
                344444333............................3 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.082
                 HHHHHHHHHHCCHHHH CS
  PF05739.14   1 erdeeleelessigeL 16 
                 ++d+e++++ +si+ L
  MMETSP1325-20131115|6360_1  97 DQDREIDMVAKSITAL 112
                 59***********987 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14  31 gelldrIdnnvesassrverankr 54 
                 g+++  + +  + ++ + +ra+k+
  MMETSP1325-20131115|6360_1 138 GNIVRTLAQRLQAVNVKFRRAQKE 161
                 555666666666666777777766 PP

  == domain 4    score: 56.0 bits;  conditional E-value: 1.4e-18
                 HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF05739.14   1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalryqk 63 
                 erd+e+ ++ ++i eL  +f++++++v +Qg++ldrId+n+e+++  +e++   l ka+ yqk
  MMETSP1325-20131115|6360_1 220 ERDQEISKIVQNIEELSAIFKELAVLVIDQGTILDRIDYNMEQVVQSTEDGVIALEKAEAYQK 282
                 8**********************************************************9997 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.1   1.3e-12   1.9e-09       2     102 ..      54     151 ..      53     152 .. 0.95
   2 ?    3.6   0.2     0.043        65       7      28 ..     216     237 ..     211     278 .. 0.82

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 1.3e-12
  PF00804.20   2 mseffeqveeIrgeiekisekveelkrlhsrilaspdpd...kqtkeeleeltaeikklankirskLksleqsieqeegqnrssadlrirktqhstlsrkFkev 102
                 ++ +++ ve+I+ ++++ ++k++ l  lh + l+ +++d   ++  +e++   + i+ l++++++ Lk+++ s       n s ++++ir + ++tl+++++ v
  MMETSP1325-20131115|6360_1  54 PPAWVDTVEQIEADMAEMDKKMDTLIGLHTKRLMVTFDDsseRDQDREIDMVAKSITALFRRCERTLKRIQGS------ANDSGSEQKIRGNIVRTLAQRLQAV 151
                 5789*****************************99997777799999**************************......7*********************987 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.043
  PF00804.20   7 eqveeIrgeiekisekveelkr 28 
                 +q+ e  +ei+ki +++eel+ 
  MMETSP1325-20131115|6360_1 216 KQAAERDQEISKIVQNIEELSA 237
                 5777778888888888888865 PP

>> PF00015.16  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   2.3   2.4e-06    0.0036     122     192 ..     210     280 ..     191     286 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 2.4e-06
                 .-----HHHHH---CCCCHHHHCCCHHHH---HHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH CS
  PF00015.16 122 eveegselveetgealkeIveavaeiadlvqeiaaaseeqsasieevnqaveeidevtkenaalveeaaaa 192
                  v+ + ++++e  +++++Iv++++e +++ +e+a+ + +q + ++ +  ++e++ ++t++ + + e a+a 
  MMETSP1325-20131115|6360_1 210 VVDDAEKQAAERDQEISKIVQNIEELSAIFKELAVLVIDQGTILDRIDYNMEQVVQSTEDGVIALEKAEAY 280
                 5788889999999***********************************************99988888775 PP

>> PF01601.11  Coronavirus S2 glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   4.8e-06    0.0073     450     565 ..     189     305 ..     148     308 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.8e-06
  PF01601.11 450 tesdvvqlescevnyvnvtetvleelvpdlidvnkeleeilknlkstapdlkeldkfNatllnltkei.eelqeviknlNeslidLeelnrvetyiKWpWyvWLaiilalvalvlll 565
                 + ++++ l+++ v+++  + +v+++  ++  + ++e+++i++n+++    +kel  + +    + + i  ++++v+++  + +i Le+ + +++  +  W + ++++l +v+l++l+
  MMETSP1325-20131115|6360_1 189 SGAQLTSLDTAGVQFTMEQLAVVDDAEKQAAERDQEISKIVQNIEELSAIFKELAVLVIDQGTILDRIdYNMEQVVQSTEDGVIALEKAEAYQKSARPRWCICILLFLITVLLTFLI 305
                 556777888899999999999999999****************987777777655555544445555535899****************************9999999998888776 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.1   1.6e-05     0.024     314     483 ..      97     266 ..      45     268 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.6e-05
   PF05667.6 314 aevkteedrtkerekelealqeqidelessieeveeeikalkskikeveeeleevkeeneeleeevkikkrtvelledaeenvakLqalveasserlleLaq...qWeahrkpLidelrelkekarekedetkrkleeikklrekikeleselqtkeelykqLlkeyenasks 483
                  ++ + +  +k  ++     ++ +++++ s++ + +e k     +++++++l++v+++  + ++e+  k+++ +  + a+     L +  + s+++l  L     q+   + +++d  ++ +   +e+ +e ++ +++i++l    kel+  +  +     +   ++e++ +s
  MMETSP1325-20131115|6360_1  97 DQDREIDMVAKSITALFRRCERTLKRIQGSANDSGSEQKIRGNIVRTLAQRLQAVNVKFRRAQKEYLSKRQAQKTGATADGTFDFLSETEKGSGAQLTSLDTagvQFTMEQLAVVDDAEKQA---AERDQEISKIVQNIEELSAIFKELAVLVIDQGTILDRIDYNMEQVVQS 266
                 344444444444455556678889999999999999999999****************************************************999999855559**********999887...88999*******************999999999888888888887665 PP

>> PF05508.6  RanGTP-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   6.3e-05     0.095      83     153 ..      58     135 ..      50     177 .. 0.80
   2 ?    1.4   0.1     0.072   1.1e+02      97     130 ..     202     235 ..     191     247 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.3e-05
   PF05508.6  83 velikeLkeeieeldekleeaaeaeee.......kkssekekesikkvekeikeLLkrieeaiPllnLslttsGanls 153
                 v  ++++++++ e+d+k+++++  + +       + s+++++++i  v k+i  L++r e+++  ++ s   sG + +
  MMETSP1325-20131115|6360_1  58 VDTVEQIEADMAEMDKKMDTLIGLHTKrlmvtfdDSSERDQDREIDMVAKSITALFRRCERTLKRIQGSANDSGSEQK 135
                 5668999*************99877778899998899999**********************9999999999997543 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.072
   PF05508.6  97 dekleeaaeaeeekkssekekesikkvekeikeL 130
                 + ++e++a    ++k++++++++i+k++++i+eL
  MMETSP1325-20131115|6360_1 202 QFTMEQLAVVDDAEKQAAERDQEISKIVQNIEEL 235
                 45677777777789999999**********9998 PP

>> PF10392.4  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00056      0.85      35      96 ..      61     124 ..      57     145 .. 0.80
   2 ?    0.5   0.0      0.32   4.9e+02      67      97 ..     133     164 ..     102     175 .. 0.73
   3 ?    3.3   0.0     0.045        68      56      98 ..     206     249 ..     198     270 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00056
   PF10392.4  35 lkrlnydiqeldkrlrqlitsnhleLlehlskskslss..vlselksslesLsasyerlkskvl 96 
                 +++++ d+ e+dk++++li  + + L+  +++s++ ++    +++ +s+ +L    er  + + 
  MMETSP1325-20131115|6360_1  61 VEQIEADMAEMDKKMDTLIGLHTKRLMVTFDDSSERDQdrEIDMVAKSITALFRRCERTLKRIQ 124
                 78999**************************999988766788888888888877777666665 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.32
   PF10392.4  67 skslss.vlselksslesLsasyerlkskvle 97 
                 +++ ++ ++ +l ++l++++  ++r +++ l 
  MMETSP1325-20131115|6360_1 133 EQKIRGnIVRTLAQRLQAVNVKFRRAQKEYLS 164
                 45555667778888888888888887776555 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.045
   PF10392.4  56 nhleLlehlskskslss.vlselksslesLsasyerlkskvlep 98 
                 ++l + + ++k++ +++   s++ +++e+Lsa ++ l   v++ 
  MMETSP1325-20131115|6360_1 206 EQLAVVDDAEKQAAERDqEISKIVQNIEELSAIFKELAVLVIDQ 249
                 34444455555555555566666666666666666666666655 PP

>> PF03840.9  Preprotein translocase SecG subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.8e-05       0.1       3      28 ..     289     314 ..     287     323 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6.8e-05
   PF03840.9   3 illvllvivailLivlVLlQsgkgag 28 
                  + +ll+++ +lL++l+L ++gk  g
  MMETSP1325-20131115|6360_1 289 CICILLFLITVLLTFLILKHQGKLEG 314
                 5789*******************776 PP

>> PF09871.4  Uncharacterized protein conserved in archaea (DUF2098)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.8   2.7e+03      49      62 ..      90     103 ..      60     130 .. 0.66
   2 ?   11.6   0.0   0.00011      0.17      20      79 ..     182     241 ..     174     250 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.8
   PF09871.4  49 vdkkkekkeeeeed 62 
                  d+++e+++++e+d
  MMETSP1325-20131115|6360_1  90 FDDSSERDQDREID 103
                 34555565555554 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00011
   PF09871.4  20 VkdikeeddeewvlldstdLyYrteyLevvdkkkekkeeeeedkeelierikkeeeelee 79 
                  ++ ++  +++   ld+ ++ +  e+L vvd+++++  e+ ++  + +++i++ +  ++e
  MMETSP1325-20131115|6360_1 182 LSETEKGSGAQLTSLDTAGVQFTMEQLAVVDDAEKQAAERDQEISKIVQNIEELSAIFKE 241
                 556667778888899****************99999999999999999999988766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       935  (0.0683879); expected 273.4 (0.02)
Passed bias filter:                      554  (0.0405208); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.80u 0.37s 00:00:01.17 Elapsed: 00:00:00.54
# Mc/sec: 1522.13
//
Query:       MMETSP1325-20131115|6366_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00034   19.8   1.5       0.99    8.7   0.1    3.0  3  PF04977.10 Septum formation initiator
     0.0017   17.9   2.6        1.1    8.9   0.2    2.4  2  PF07544.8  RNA polymerase II transcription mediator complex subunit 9
     0.0028   17.8   6.5      0.042   14.0   0.5    3.0  2  PF06005.7  Protein of unknown function (DUF904)
  ------ inclusion threshold ------
       0.01   15.5   1.4       0.01   15.5   1.0    2.6  2  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.021   14.6   0.0      0.059   13.1   0.0    1.6  2  PF01113.15 Dihydrodipicolinate reductase, N-terminus
      0.021   14.3   0.5        2.9    7.4   0.1    2.3  2  PF14063.1  Protein of unknown function (DUF4254)
       0.04   13.7   0.8        3.3    7.4   0.1    2.2  2  PF11559.3  Afadin- and alpha -actinin-Binding
      0.043   13.5   2.0        2.5    7.8   0.1    2.5  2  PF06698.6  Protein of unknown function (DUF1192)
      0.062   13.1   5.9       0.54   10.1   0.5    2.4  2  PF00170.16 bZIP transcription factor
      0.096   12.3   2.6        1.3    8.7   0.2    2.2  2  PF05812.7  Herpesvirus BLRF2 protein
       0.29   10.3   4.0          2    7.6   1.0    2.1  2  PF14335.1  Domain of unknown function (DUF4391)
       0.38    9.7   6.2        2.8    6.9   0.2    2.3  2  PF13851.1  Growth-arrest specific micro-tubule binding
       0.48   10.3   4.9        4.9    7.0   0.8    2.1  2  PF07798.6  Protein of unknown function (DUF1640)
       0.86    7.9   6.8       0.38    9.1   2.1    1.8  2  PF10267.4  Predicted transmembrane and coiled-coil 2 protein
        1.5    8.6   8.8        9.8    6.0   2.8    2.3  2  PF13863.1  Domain of unknown function (DUF4200)
        1.5    8.1   5.7         12    5.2   0.2    2.2  2  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
        1.9    8.1   7.9          3    7.5   0.5    2.3  2  PF01920.15 Prefoldin subunit
        3.1    7.2   8.7         18    4.7   3.5    2.2  2  PF01025.14 GrpE
        5.6    6.2   9.4        7.9    5.7   2.5    2.1  2  PF05529.7  B-cell receptor-associated protein 31-like


Domain annotation for each model (and alignments):
>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.62   4.5e+02      58      71 ..      21      34 ..      20      35 .. 0.88
   2 !    7.7   0.2     0.003       2.2      26      46 ..      53      73 ..      48      80 .. 0.74
   3 !    8.7   0.1    0.0014      0.99      19      45 ..     158     177 ..     152     190 .. 0.54

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.62
  PF04977.10 58 eeqARselglvkpg 71
                +++ Rs lg++ +g
  MMETSP1325-20131115|6366_1 21 DKRCRSALGMSSQG 34
                6899******9876 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.003
  PF04977.10 26 iaalqaelaklkaeneeLeae 46
                ia l++e+a l++en++L++ 
  MMETSP1325-20131115|6366_1 53 IASLKKEIALLEKENTSLKKD 73
                677777777777777777765 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.0014
  PF04977.10  19 lyqlkqeiaalqaelaklkaeneeLea 45 
                 + ++++eia l++e++k+k       +
  MMETSP1325-20131115|6366_1 158 MEEKDAEIASLKKEIQKMK-------D 177
                 3344444444444444443.......3 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1    0.0016       1.1      46      75 ..      45      74 ..      41      81 .. 0.88
   2 !    8.9   0.2    0.0015       1.1      48      74 ..     152     178 ..     146     186 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0016
   PF07544.8 46 elpdisrsveeqeaeIeeleeqiarkrevL 75
                e pdi + +++ ++eI+ le++++ +++ L
  MMETSP1325-20131115|6366_1 45 EKPDIGEMIASLKKEIALLEKENTSLKKDL 74
                67*********************9998765 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0015
   PF07544.8  48 pdisrsveeqeaeIeeleeqiarkrev 74 
                 pd + + ee  aeI++l+++i++ +++
  MMETSP1325-20131115|6366_1 152 PDKAATMEEKDAEIASLKKEIQKMKDH 178
                 6667899**************997765 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.5   5.8e-05     0.042      18      69 ..      51      97 ..      51      98 .. 0.72
   2 ?    5.7   0.4     0.022        16      19      36 ..     164     181 ..     124     219 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.8e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTHHHHH---- CS
   PF06005.7 18 dtialLqmeieeLkeeneqlkeeneeLeeenkklkeereawqerlralLgkl 69
                + ia L++ei+ L++en++lk+    L    +  k+  ++w+e+++a + kl
  MMETSP1325-20131115|6366_1 51 EMIASLKKEIALLEKENTSLKK---DLATALN--KSVPQSWKEHVDACVAKL 97
                679************9777764...3333332..356778888888888776 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHHHHHHHH CS
   PF06005.7  19 tialLqmeieeLkeeneq 36 
                 +ia L++ei++ k+ + +
  MMETSP1325-20131115|6366_1 164 EIASLKKEIQKMKDHQFK 181
                 578888888888875433 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.9    0.0012      0.85      49      72 ..      53      76 ..      42      80 .. 0.66
   2 ?   15.5   1.0   1.4e-05      0.01       5      27 ..     156     178 ..     153     182 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0012
   PF12329.3 49 ieelkkkleklekeleeleerlkr 72
                i++lkk+++ leke  +l++ l +
  MMETSP1325-20131115|6366_1 53 IASLKKEIALLEKENTSLKKDLAT 76
                556666666666666666665554 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 1.4e-05
   PF12329.3   5 kklkeKdeqIaqLmeEgekLskk 27 
                 ++++eKd++Ia L++E++k  + 
  MMETSP1325-20131115|6366_1 156 ATMEEKDAEIASLKKEIQKMKDH 178
                 679****************9876 PP

>> PF01113.15  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   8.2e-05     0.059      36     103 ..      41     109 ..      26     115 .. 0.84
   2 ?   -1.9   0.0       3.6   2.6e+03      51      52 ..     159     160 ..     127     188 .. 0.54

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 8.2e-05
                 -...........................-EE-.-S--BB-S-GGGHHHHHHHHHHHT---EE---S--H CS
  PF01113.15  36 eselegkdagellglgklgvavtddleevlek.advliDFTtpeavlenlklalekgvklViGTTGlse 103
                  +++e+ d+ge++ + k ++a+ ++ ++ l+k    ++  ++p++ +e+++++++k + +V+G+ G  +
  MMETSP1325-20131115|6366_1  41 AEAAEKPDIGEMIASLKKEIALLEKENTSLKKdLATALNKSVPQSWKEHVDACVAKLMCPVCGSPGTRS 109
                 4677889****9999999998886666666666999***************************999865 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 3.6
                 .. CS
  PF01113.15  51 gk 52 
                 ++
  MMETSP1325-20131115|6366_1 159 EE 160
                 22 PP

>> PF14063.1  Protein of unknown function (DUF4254)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.021        15      24      64 ..      46      85 ..      41      98 .. 0.79
   2 ?    7.4   0.1     0.004       2.9      17      50 ..     150     183 ..     141     198 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.021
   PF14063.1 24 rpdvddaeiaklKRaIdklnqeRndlveaiDelllealkdv 64
                +pd+ +  ia+lK++I+ l++e + l +++ ++l +++++ 
  MMETSP1325-20131115|6366_1 46 KPDIGE-MIASLKKEIALLEKENTSLKKDLATALNKSVPQS 85
                455555.8999999*99999999999999999999888765 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.004
   PF14063.1  17 hleDearrpdvddaeiaklKRaIdklnqeRndlv 50 
                 ++ D+a   + +daeia+lK++I+k+   + ++ 
  MMETSP1325-20131115|6366_1 150 EEPDKAATMEEKDAEIASLKKEIQKMKDHQFKFY 183
                 566889899999*************998876654 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.034        24      83     108 ..      54      79 ..      47      87 .. 0.64
   2 ?    7.4   0.1    0.0046       3.3      58      81 ..     155     178 ..     142     186 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.034
   PF11559.3  83 eqlerelallqekerqlekklktleq 108
                 ++l++e+all+++ ++l+k+l+t+ +
  MMETSP1325-20131115|6366_1  54 ASLKKEIALLEKENTSLKKDLATALN 79 
                 45566666666666666666665544 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0046
   PF11559.3  58 eetlrkleaeierlqskierlktq 81 
                 ++t+ +++aei++l+++i+++k+ 
  MMETSP1325-20131115|6366_1 155 AATMEEKDAEIASLKKEIQKMKDH 178
                 679999***************975 PP

>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1    0.0035       2.5      26      54 ..      49      77 ..      47      78 .. 0.82
   2 ?    4.9   0.1     0.027        20      24      43 ..     159     178 ..     133     181 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0035
   PF06698.6 26 LeeRIalLqaEIaRleaalakkkasraAA 54
                + e Ia L++EIa le++ ++ k+ +a+A
  MMETSP1325-20131115|6366_1 49 IGEMIASLKKEIALLEKENTSLKKDLATA 77
                6789************9988877766665 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.027
   PF06698.6  24 eELeeRIalLqaEIaRleaa 43 
                 eE ++ Ia L++EI+ ++++
  MMETSP1325-20131115|6366_1 159 EEKDAEIASLKKEIQKMKDH 178
                 66677888888888887665 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.5   0.00076      0.54      28      50 ..      53      75 ..      51      88 .. 0.79
   2 ?    5.2   0.3     0.024        18      39      61 ..     159     177 ..     146     180 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00076
                HHHHHHHHHHHHHHH.......H CS
  PF00170.16 28 ieeLeekvkeLeaeNkaLkkele 50
                i+ L+++++ Le+eN++Lkk l 
  MMETSP1325-20131115|6366_1 53 IASLKKEIALLEKENTSLKKDLA 75
                678999999********999875 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.024
                 HHHH.......HHHHHHHHHHHH CS
  PF00170.16  39 eaeNkaLkkeleelkkevaklks 61 
                 e++      e+ +lkke++k+k+
  MMETSP1325-20131115|6366_1 159 EEKD----AEIASLKKEIQKMKD 177
                 3333....477777777777776 PP

>> PF05812.7  Herpesvirus BLRF2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.2    0.0017       1.3       6      31 ..      54      79 ..      50      92 .. 0.81
   2 ?    3.6   0.1     0.069        50      26      58 ..     141     173 ..     131     190 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0017
                HHHHHHHHHHHHHHHHHHHCHHH--- CS
   PF05812.7  6 eeLaaelakLklENkaLkkklksstg 31
                  L++e+a L+ EN  Lkk l    +
  MMETSP1325-20131115|6366_1 54 ASLKKEIALLEKENTSLKKDLATALN 79
                6799***************9987654 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.069
                 HHH---..--TT--B--HHHHHHHHHHHHHH-- CS
   PF05812.7  26 lksstgpkespkdevLtprqkealitsavskLs 58 
                   ++t+ + +++d+  t ++k+a i+s+ +++ 
  MMETSP1325-20131115|6366_1 141 ASQGTEEAAEEPDKAATMEEKDAEIASLKKEIQ 173
                 555555566666777777777777776655544 PP

>> PF14335.1  Domain of unknown function (DUF4391)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.057        41     173     199 ..      48      75 ..      15      82 .. 0.64
   2 ?    7.6   1.0    0.0028         2     172     202 ..     143     176 ..     122     186 .. 0.76

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.057
   PF14335.1 173 slkerve.rlkqieelekeiaklkkklk 199
                 ++ e ++   k+i+ leke ++lkk+l+
  MMETSP1325-20131115|6366_1  48 DIGEMIAsLKKEIALLEKENTSLKKDLA 75 
                 3433333034567777777777777776 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0028
   PF14335.1 172 a...slkerverlkqieelekeiaklkkklkkek 202
                 +   +++e+ ++ + +ee+++eia+lkk+++k k
  MMETSP1325-20131115|6366_1 143 QgteEAAEEPDKAATMEEKDAEIASLKKEIQKMK 176
                 1445888899999999999999999999999977 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2    0.0039       2.8      27      53 ..      51      77 ..      49      85 .. 0.84
   2 ?    5.2   1.0     0.013       9.5      29      56 ..     165     192 ..     126     198 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0039
   PF13851.1 27 elIkslkeeiaelkkkeekneklmaei 53
                e+I slk+eia l+k+ ++ +k++a  
  MMETSP1325-20131115|6366_1 51 EMIASLKKEIALLEKENTSLKKDLATA 77
                689999999999999999999988765 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.013
   PF13851.1  29 Ikslkeeiaelkkkeekneklmaeikke 56 
                 I slk+ei+++k  + k  ++m ei+  
  MMETSP1325-20131115|6366_1 165 IASLKKEIQKMKDHQFKFYNDMPEIDDH 192
                 7888888888888888888888777765 PP

>> PF07798.6  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.034        24      65      91 ..      50      76 ..      48      89 .. 0.87
   2 ?    7.0   0.8    0.0068       4.9     117     156 ..     143     181 ..     134     184 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.034
   PF07798.6 65 selvsleksefsnlqaeneklksdlek 91
                +e++ + k+e+++l++en  lk+dl  
  MMETSP1325-20131115|6366_1 50 GEMIASLKKEIALLEKENTSLKKDLAT 76
                5899999*****************964 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0068
   PF07798.6 117 rireelaeqekkiketntkidteiagLktqlesaKldvik 156
                 + +ee+ae+ +k   +++k d eia+Lk++++++K    k
  MMETSP1325-20131115|6366_1 143 QGTEEAAEEPDKAATMEEK-DAEIASLKKEIQKMKDHQFK 181
                 5578999999999999988.99********9999976666 PP

>> PF10267.4  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.27     2e+02     220     244 ..      52      76 ..      21      91 .. 0.66
   2 ?    9.1   2.1   0.00053      0.38     159     243 ..     109     194 ..     101     196 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.27
   PF10267.4 220 eleeikeeqsrLeeslerLkeqlkk 244
                  ++++k+e + Le++  +Lk++l +
  MMETSP1325-20131115|6366_1  52 MIASLKKEIALLEKENTSLKKDLAT 76 
                 3455555555555555555555444 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00053
   PF10267.4 159 alsssatlvleskyksddssecssatsssadansnkggetg.slagsaaaaqselslkklleeleeikeeqsrLeeslerLkeqlk 243
                 + s+s+++  e  + + +s + s+ + +  +a s+ + e++ +  + a+ +++  ++  l++e++ +k++q ++ +++ ++ ++l+
  MMETSP1325-20131115|6366_1 109 SSSGSTMFGCECDWFEAESEDESEDEQELGKAASQGTEEAAeEPDKAATMEEKDAEIASLKKEIQKMKDHQFKFYNDMPEIDDHLQ 194
                 55556666666666555544444444333334444444455344557788899999*********************999988876 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.026        18      72     105 ..      42      75 ..      39      79 .. 0.83
   2 ?    6.0   2.8     0.014       9.8      60     102 ..     135     177 ..     123     191 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.026
   PF13863.1  72 ekkekkekeeeikklkaqleelkaeiekleekle 105
                 e+ ek  + e i++lk++++ l++e++ l++ l 
  MMETSP1325-20131115|6366_1  42 EAAEKPDIGEMIASLKKEIALLEKENTSLKKDLA 75 
                 6777778889999999999999999999999876 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.014
   PF13863.1  60 akreraekkaeeekkekkekeeeikklkaqleelkaeieklee 102
                 ++  +a     ee+ e   k + +++  a++++lk+ei+k+++
  MMETSP1325-20131115|6366_1 135 QELGKAASQGTEEAAEEPDKAATMEEKDAEIASLKKEIQKMKD 177
                 5555555555666777777777777777777777777777765 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.017        12      86     129 ..      51      94 ..      42      98 .. 0.63
   2 ?    5.2   0.7     0.017        12     108     131 ..     155     178 ..     119     199 .. 0.53

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.017
   PF07106.8  86 eevqelkqeiselekelkkLtseltteelleeiqelkkeveeie 129
                 e + +lk+ei  leke  +L+++l t+  +   q+ k++v++  
  MMETSP1325-20131115|6366_1  51 EMIASLKKEIALLEKENTSLKKDLATALNKSVPQSWKEHVDACV 94 
                 44566777777777777777777755544444466666666555 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.017
   PF07106.8 108 eltteelleeiqelkkeveeieek 131
                 + t+ee   ei++lkke++++++ 
  MMETSP1325-20131115|6366_1 155 AATMEEKDAEIASLKKEIQKMKDH 178
                 444444444555555555444432 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.5    0.0042         3      64      93 ..      46      75 ..      40      81 .. 0.85
   2 ?    4.4   0.9     0.038        27      60     100 ..     154     194 ..     134     199 .. 0.70

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0042
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15 64 keeLeerketlekeiktlekqleklekele 93
                k++  e++++l+kei  lek+ ++l+k+l+
  MMETSP1325-20131115|6366_1 46 KPDIGEMIASLKKEIALLEKENTSLKKDLA 75
                678889999999999999999999999886 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.038
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  60 keevkeeLeerketlekeiktlekqleklekeleelkeely 100
                 k+ + ee ++++++l+kei+++++ + k  +++ e+ ++l+
  MMETSP1325-20131115|6366_1 154 KAATMEEKDAEIASLKKEIQKMKDHQFKFYNDMPEIDDHLQ 194
                 55555666666666777777766666666666666666665 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.042        30      10      44 ..      42      76 ..      37      97 .. 0.68
   2 ?    4.7   3.5     0.024        18       4      42 ..     148     186 ..     124     197 .. 0.68

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.042
  PF01025.14 10 eedeeeeleeeleeleeevkelkdkllrllaefen 44
                e++e+ ++ e +++l++e++ l+++   l++++  
  MMETSP1325-20131115|6366_1 42 EAAEKPDIGEMIASLKKEIALLEKENTSLKKDLAT 76
                55666666666777777777776666666666654 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.024
  PF01025.14   4 eeeeeeeedeeeeleeeleeleeevkelkdkllrllaef 42 
                  +ee +++++ ee ++e+++l++e++++kd+  +  +++
  MMETSP1325-20131115|6366_1 148 AAEEPDKAATMEEKDAEIASLKKEIQKMKDHQFKFYNDM 186
                 344555566666666677778888888888766666555 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.039        28     151     184 ..      42      75 ..       8      81 .. 0.72
   2 ?    5.7   2.5     0.011       7.9     137     173 ..     138     176 ..     121     191 .. 0.53

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.039
   PF05529.7 151 keekekklkeeveklkkeleekekdlealkkqae 184
                 +++++ +  e ++ lkke++  ek+ + lkk ++
  MMETSP1325-20131115|6366_1  42 EAAEKPDIGEMIASLKKEIALLEKENTSLKKDLA 75 
                 5566677778899999999999999999999765 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.011
   PF05529.7 137 kkqaesatkaakkl.....keekekklkeeveklkkeleeke 173
                  k a++ t++   +     k+++ +++++e++ lkke+++ +
  MMETSP1325-20131115|6366_1 138 GKAASQGTEE---AaeepdKAATMEEKDAEIASLKKEIQKMK 176
                 2222222222...12223455666666667777777776632 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1290  (0.0943534); expected 273.4 (0.02)
Passed bias filter:                      791  (0.0578555); expected 273.4 (0.02)
Passed Vit filter:                       109  (0.0079725); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.71u 0.42s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 1046.10
//
Query:       MMETSP1325-20131115|6372_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-10   40.9   0.0    1.7e-10   40.5   0.0    1.1  1  PF00787.19 PX domain


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   1.3e-14   1.7e-10      36     107 ..      21      90 ..      10      94 .. 0.94

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 1.3e-14
                 EEEEEHHHHHHHHHHHHHHTTTSTSTS--TTSSSHHCGTTSHHHHHHHHHHHHHHHHHHHHSCHHHHSHHHH CS
  PF00787.19  36 tvkRrYsdFeeLhskLlrkfprlklPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrksevlt 107
                 ++ +rY+ F++L+++L +++   ++P +P+k+  +    + ++++++r+++L++yL  +++h+ lr++e ++
  MMETSP1325-20131115|6372_1  21 NLFHRYKAFHRLNKRLVERYGAGMVPRFPGKKFNQL--ISADRVAQSRQAKLNRYLDGIMEHERLRNCEDFK 90 
                 5679****************************9998..999***************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.67
# Mc/sec: 557.96
//
Query:       MMETSP1325-20131115|6375_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.5   2.6       0.12   12.2   1.8    1.3  1  PF10217.4 Uncharacterized conserved protein (DUF2039)


Domain annotation for each model (and alignments):
>> PF10217.4  Uncharacterized conserved protein (DUF2039)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.8   8.8e-06      0.12      20      68 ..      40      88 ..       8      89 .] 0.76

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 8.8e-06
   PF10217.4 20 eekkikslaltslCerCkekieWkvkygKYka.lkeekkCnkCeektvkk 68
                 +++ ++    ++C +C +  + k+ y+ Y + l+++  C+ C+ k v++
  MMETSP1325-20131115|6375_1 40 GKEEYEAGLNRKICPNCVQ-ADGKLVYQAYDEyLEKRDTCSVCSSKYVNQ 88
                4555666778899****86.699*******872568999*******9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       664  (0.0485664); expected 273.4 (0.02)
Passed bias filter:                      487  (0.0356202); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 410.15
//
Query:       MMETSP1325-20131115|6373_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-13   47.9   0.0    9.9e-13   47.5   0.0    1.1  1  PF01062.16 Bestrophin, RFP-TM, chloride channel


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.0   7.2e-17   9.9e-13     122     278 ..       7     174 ..       2     194 .. 0.86

  Alignments for each domain:
  == domain 1    score: 47.5 bits;  conditional E-value: 7.2e-17
  PF01062.16 122 rtia.yavllqvl.lrdisaavkkr.....lealveaglmteeee.kleksknkpywvpivwaeslqkarkegr..lddialkaldeelnelrealggleridwtpiPlaYtqlvhlavylyflllpfglqdeldlvt.plltvlqfyffvglekvaeeLenPFGedd 278
                  tia y+ l +vl + +++++ +       l++lv+ g +t++e+ +l +s+   + v+ ++++ l+ a ++gr    ++++  l ++++elr+  +++    +  +PlaY qlv+++v + + + p++l ++++ +  ++ t+l+ +f   ++ +a+  ++PF +++
  MMETSP1325-20131115|6373_1   7 ATIArYVRLFNVLlYASVTTRFAPLktpsgLSRLVKNGHLTADEKeALLQSSLGHNIVLEWIFTLLNSAVADGRlgGGSTLQLVLANKITELRATYATIPDALSGRMPLAYAQLVQILVDVLVSASPVALIHSVGGFGaIVGTALITLFHASILNLAKMFLDPFNNNE 174
                 567778888888855665555443356889***************7777999999999999999999999999965567889999*************************************************98886899**********************9864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1123.00
//
Query:       MMETSP1325-20131115|6379_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.7    8.0   7.7          3    7.9   5.3    1.1  1  PF04626.8 Dec-1 protein, C terminal region


Domain annotation for each model (and alignments):
>> PF04626.8  Dec-1 protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   5.3   0.00022         3      71     109 ..      21      59 ..       6      63 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00022
   PF04626.8  71 rpvvqsygtsyggggygsnaygvprpvnsyqsqgyraav 109
                      sy +syg     s +yg      sy s  y aa 
  MMETSP1325-20131115|6379_1  21 SSYGSSYSSSYGDESSYSSSYGESSSYSSYSSYAYAAAY 59 
                 55667999*****99999*****************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 288.45
//
Query:       MMETSP1325-20131115|6378_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-10   41.5   0.0    2.1e-10   41.4   0.0    1.1  1  PF13602.1 Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> PF13602.1  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   1.5e-14   2.1e-10      84     125 ..      42      87 ..      16      88 .. 0.87

  Alignments for each domain:
  == domain 1    score: 41.4 bits;  conditional E-value: 1.5e-14
   PF13602.1  84 l....eelaalveaGklkpvvdrvfpLeeaaeAhrrlesgrarGKi 125
                 l    +e+ +++++Gklk  +dr+fpL+e++e h +l+sg ++GK+
  MMETSP1325-20131115|6378_1  42 LlwrsSEVFGWYDEGKLKCSIDRTFPLSETPEGHLYLQSGASTGKV 87 
                 3355589**************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 417.14
//
Query:       MMETSP1325-20131115|6380_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   12.3   0.0       0.16   12.1   0.0    1.2  1  PF07327.6 Neuroparsin


Domain annotation for each model (and alignments):
>> PF07327.6  Neuroparsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.1e-05      0.16      22      61 ..      32      72 ..       9      86 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.1e-05
   PF07327.6 22 aeanpisrscegancvvd.ltrceygevtdffgrkvcakgp 61
                 e+npisr  eg +  +d     + g+ ++f+g++  a   
  MMETSP1325-20131115|6380_1 32 RENNPISRFFEGLDDFIDdAMDRKLGNGAEFYGKRKSAFYG 72
                599*********9877761567899********87766433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 504.76
//
Query:       MMETSP1325-20131115|6383_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 283.21
//
Query:       MMETSP1325-20131115|6386_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|6387_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 327.67
//
Query:       MMETSP1325-20131115|6388_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-53  178.3  12.9    1.4e-21   76.5   0.5    2.4  3  PF12796.2  Ankyrin repeats (3 copies)
    1.2e-35  119.4   2.7    1.2e-09   37.3   0.1    5.0  5  PF00023.25 Ankyrin repeat
    5.2e-30  103.1   2.3    2.2e-11   43.8   0.0    4.0  4  PF13637.1  Ankyrin repeats (many copies)
    2.8e-28   97.1   6.4    1.2e-09   37.9   0.3    4.0  4  PF13857.1  Ankyrin repeats (many copies)
      1e-26   90.1   0.1      3e-06   26.8   0.0    5.0  5  PF13606.1  Ankyrin repeat
    0.00037   20.1   5.3        4.2    7.2   0.1    3.8  4  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
       0.75    9.2   3.8          2    7.8   0.7    2.7  4  PF06821.8  Serine hydrolase


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.5   0.5     7e-25   1.4e-21       8      88 ..       2      89 ..       1      90 [. 0.95
   2 !   65.5   0.4   1.9e-21   3.6e-18      13      87 ..      43     121 ..      43     123 .. 0.94
   3 !   56.0   0.3   1.7e-18   3.3e-15       1      69 [.      64     138 ..      64     139 .] 0.86

  Alignments for each domain:
  == domain 1    score: 76.5 bits;  conditional E-value: 7e-25
   PF12796.2  8 gnlelvklLlekgadvdl.......getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88
                g++ +v+ Lle++adv++       g t+L++A+++g++++v++Ll+a+ dvn ++++g+t+L++A+ +gh+e+v  Ll++ adv+  
  MMETSP1325-20131115|6388_1  2 GHVAVVRALLEAKADVNRatpaadgGVTALMWASQNGHVAVVRALLAANSDVNKTSERGQTALMIAAGSGHVEVVTALLQANADVDKA 89
                89***************88888888888********************************************************9976 PP

  == domain 2    score: 65.5 bits;  conditional E-value: 1.9e-21
   PF12796.2  13 vklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87 
                 v+ Ll+++ dv+     g+t+L++Aa +g++e+v +Ll+a+adv+  d++g tpL++A ++gh+ +v+ Ll++  ++++
  MMETSP1325-20131115|6388_1  43 VRALLAANSDVNKtserGQTALMIAAGSGHVEVVTALLQANADVDKADDDGLTPLMAASEKGHIHVVNALLQANPKPDV 121
                 789*********88888888****************************************************9887775 PP

  == domain 3    score: 56.0 bits;  conditional E-value: 1.7e-18
   PF12796.2   1 LhlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakd..kegntpLhlAvrn 69 
                 L++Aa +g++e+v  Ll+++advd     g tpL++A+e+g++ +v++Ll+a+  ++  +  +eg+t+L++A  +
  MMETSP1325-20131115|6388_1  64 LMIAAGSGHVEVVTALLQANADVDKadddGLTPLMAASEKGHIHVVNALLQANPKPDVDKanEEGRTALMIASDS 138
                 89**********************88777777*******************987554433449********9765 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   3.4e-05     0.066      13      31 ..       2      20 ..       1      22 [. 0.90
   2 !   30.5   0.0     9e-11   1.8e-07       2      31 ..      27      56 ..      26      58 .. 0.94
   3 !   37.3   0.1     6e-13   1.2e-09       2      33 .]      60      91 ..      59      91 .. 0.96
   4 !   26.7   0.0   1.5e-09   2.9e-06       1      28 [.      92     119 ..      92     123 .. 0.90
   5 !    8.7   0.0   0.00072       1.4       2      13 ..     128     139 .]     127     139 .] 0.88

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.4e-05
                THHHHHHHHHHTTSSTTHB CS
  PF00023.25 13 gnlevvklLlsqGAdlnaq 31
                g++ vv+ Ll++ Ad+n  
  MMETSP1325-20131115|6388_1  2 GHVAVVRALLEAKADVNRA 20
                89***************76 PP

  == domain 2    score: 30.5 bits;  conditional E-value: 9e-11
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaq 31
                G T+L++A+++g++ vv+ Ll ++ d+n +
  MMETSP1325-20131115|6388_1 27 GVTALMWASQNGHVAVVRALLAANSDVNKT 56
                89*************************975 PP

  == domain 3    score: 37.3 bits;  conditional E-value: 6e-13
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                G+T+L++Aa +g++evv+ Ll+++Ad++  dd
  MMETSP1325-20131115|6388_1 60 GQTALMIAAGSGHVEVVTALLQANADVDKADD 91
                9***************************9987 PP

  == domain 4    score: 26.7 bits;  conditional E-value: 1.5e-09
                 TSCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdl 28 
                 dG TPL+ A+++g++ vv  Ll+++  +
  MMETSP1325-20131115|6388_1  92 DGLTPLMAASEKGHIHVVNALLQANPKP 119
                 8**********************76655 PP

  == domain 5    score: 8.7 bits;  conditional E-value: 0.00072
                 SCBHHHHHHHTT CS
  PF00023.25   2 GfTPLHlAalrg 13 
                 G+T+L++A+ +g
  MMETSP1325-20131115|6388_1 128 GRTALMIASDSG 139
                 9*******9876 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   8.1e-10   1.6e-06      12      54 .]       2      47 ..       1      47 [. 0.92
   2 !   43.8   0.0   1.1e-14   2.2e-11       1      54 []      27      80 ..      27      80 .. 0.97
   3 !   37.2   0.0   1.3e-12   2.6e-09       7      54 .]      66     113 ..      65     113 .. 0.96
   4 !    8.8   0.0    0.0011       2.1      24      41 ..     118     135 ..     111     139 .] 0.82

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 8.1e-10
   PF13637.1 12 grlelvklLlekgidinrt.d..esGntaLhiAalrgnieilklLl 54
                g++ +v+ Lle ++d+nr  +  + G taL  A ++g++ +++ Ll
  MMETSP1325-20131115|6388_1  2 GHVAVVRALLEAKADVNRAtPaaDGGVTALMWASQNGHVAVVRALL 47
                8999***************98545599*****************97 PP

  == domain 2    score: 43.8 bits;  conditional E-value: 1.1e-14
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                g+taL++a + g++ +v+ Ll+ + d+n+t e+G taL iAa  g++e++  Ll
  MMETSP1325-20131115|6388_1 27 GVTALMWASQNGHVAVVRALLAANSDVNKTSERGQTALMIAAGSGHVEVVTALL 80
                579***********************************************9997 PP

  == domain 3    score: 37.2 bits;  conditional E-value: 1.3e-12
   PF13637.1   7 yaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                  aa sg++e+v  Ll+ ++d+++ d++G t+L  A ++g+i++++ Ll
  MMETSP1325-20131115|6388_1  66 IAAGSGHVEVVTALLQANADVDKADDDGLTPLMAASEKGHIHVVNALL 113
                 5788******************************************97 PP

  == domain 4    score: 8.8 bits;  conditional E-value: 0.0011
   PF13637.1  24 gidinrtdesGntaLhiA 41 
                 ++d+++ +e+G+taL iA
  MMETSP1325-20131115|6388_1 118 KPDVDKANEEGRTALMIA 135
                 6899999*********99 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.073   1.4e+02      27      43 ..       2      18 ..       1      26 [. 0.81
   2 !   37.9   0.3   6.1e-13   1.2e-09      15      56 .]      26      67 ..      10      67 .. 0.90
   3 !   37.2   0.1     1e-12     2e-09       7      53 ..      51      97 ..      49      97 .. 0.97
   4 !   36.4   0.1   1.8e-12   3.6e-09       1      56 []      79     135 ..      79     135 .. 0.96

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.073
   PF13857.1 27 galevvrlLlapgadln 43
                g++ vvr Ll++ ad n
  MMETSP1325-20131115|6388_1  2 GHVAVVRALLEAKADVN 18
                8999******7777776 PP

  == domain 2    score: 37.9 bits;  conditional E-value: 6.1e-13
   PF13857.1 15 ggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                gg+t+L++A  +g++ vvr Lla+++d n + ++g+tal +A
  MMETSP1325-20131115|6388_1 26 GGVTALMWASQNGHVAVVRALLAANSDVNKTSERGQTALMIA 67
                688************************************998 PP

  == domain 3    score: 37.2 bits;  conditional E-value: 1e-12
   PF13857.1  7 advnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53
                 dvn t e+g+t+L++Aa  g++evv  Ll+++ad +  d dglt+l
  MMETSP1325-20131115|6388_1 51 SDVNKTSERGQTALMIAAGSGHVEVVTALLQANADVDKADDDGLTPL 97
                689*******************************************8 PP

  == domain 4    score: 36.4 bits;  conditional E-value: 1.8e-12
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLl..apgadlnlrdsdgltaldlA 56 
                 Ll+++ adv+  d  g tpL+ A ++g+ +vv  Ll  +p +d +  +++g+tal +A
  MMETSP1325-20131115|6388_1  79 LLQAN-ADVDKADDDGLTPLMAASEKGHIHVVNALLqaNPKPDVDKANEEGRTALMIA 135
                 78888.999999*******************************************998 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00036       0.7      13      29 ..       2      18 ..       1      19 [. 0.94
   2 !   22.6   0.0   3.4e-08   6.6e-05       2      30 .]      27      55 ..      26      55 .. 0.95
   3 !   26.8   0.0   1.5e-09     3e-06       2      30 .]      60      88 ..      59      88 .. 0.96
   4 !   20.2   0.0     2e-07    0.0004       1      28 [.      92     121 ..      92     123 .. 0.84
   5 ?    4.3   0.0     0.027        53       2      13 ..     128     139 .]     127     139 .] 0.86

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00036
   PF13606.1 13 grielveaLlengadin 29
                g++++v+aLle+ ad+n
  MMETSP1325-20131115|6388_1  2 GHVAVVRALLEAKADVN 18
                899*************9 PP

  == domain 2    score: 22.6 bits;  conditional E-value: 3.4e-08
   PF13606.1  2 GnTpLhlAasngrielveaLlengadina 30
                G T+L++A +ng++++v+aLl +  d+n+
  MMETSP1325-20131115|6388_1 27 GVTALMWASQNGHVAVVRALLAANSDVNK 55
                77*************************96 PP

  == domain 3    score: 26.8 bits;  conditional E-value: 1.5e-09
   PF13606.1  2 GnTpLhlAasngrielveaLlengadina 30
                G+T+L++Aa +g++e+v aLl++ ad+++
  MMETSP1325-20131115|6388_1 60 GQTALMIAAGSGHVEVVTALLQANADVDK 88
                9*************************985 PP

  == domain 4    score: 20.2 bits;  conditional E-value: 2e-07
   PF13606.1   1 nGnTpLhlAasngrielveaLleng..adi 28 
                 +G TpL+ A ++g+i +v+aLl++   +d+
  MMETSP1325-20131115|6388_1  92 DGLTPLMAASEKGHIHVVNALLQANpkPDV 121
                 799********************8512455 PP

  == domain 5    score: 4.3 bits;  conditional E-value: 0.027
   PF13606.1   2 GnTpLhlAasng 13 
                 G+T+L++A  +g
  MMETSP1325-20131115|6388_1 128 GRTALMIASDSG 139
                 9*******8776 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.1    0.0021       4.2      18      34 ..       5      21 ..       2      21 .. 0.90
   2 !    6.5   0.1    0.0034       6.6      17      32 ..      40      55 ..      37      59 .. 0.86
   3 !    6.7   0.0     0.003       5.8      15      33 ..      71      89 ..      61      89 .. 0.85
   4 ?   -1.5   0.0       1.2   2.3e+03      20      33 ..     109     124 ..     106     124 .. 0.59

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0021
                HHHHHHHHTTTSHHHHH CS
  PF00627.26 18 eakkALratnnnvErAv 34
                ++++AL +++ +v+rA+
  MMETSP1325-20131115|6388_1  5 AVVRALLEAKADVNRAT 21
                79*************95 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0034
                HHHHHHHHHTTTSHHH CS
  PF00627.26 17 eeakkALratnnnvEr 32
                 ++++AL a+n +v++
  MMETSP1325-20131115|6388_1 40 VAVVRALLAANSDVNK 55
                589**********986 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.003
                -HHHHHHHHHHTTTSHHHH CS
  PF00627.26 15 sreeakkALratnnnvErA 33
                +  e++ AL  +n +v++A
  MMETSP1325-20131115|6388_1 71 GHVEVVTALLQANADVDKA 89
                5679*************98 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 1.2
                 HHHH.HHTTT.SHHHH CS
  PF00627.26  20 kkAL.ratnn.nvErA 33 
                 + AL +a+   +v++A
  MMETSP1325-20131115|6388_1 109 VNALlQANPKpDVDKA 124
                 5566366666777766 PP

>> PF06821.8  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.88   1.7e+03      80      95 ..       5      20 ..       2      26 .. 0.72
   2 ?    7.8   0.7     0.001         2      65     111 ..      26      72 ..      23     108 .. 0.73
   3 ?    2.6   0.2      0.04        78      73     100 ..      67      93 ..      60     125 .. 0.62
   4 ?    0.1   0.0      0.24   4.7e+02      73      93 ..     100     120 ..      93     136 .. 0.61

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.88
                -E--EEEE----..S- CS
   PF06821.8 80 kvagalLVApadveee 95
                +v +alL A adv++ 
  MMETSP1325-20131115|6388_1  5 AVVRALLEAKADVNRA 20
                6888999999998633 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.001
                 --HHHHHHHH---SS-E--EEEE----..S--TT-GGGGGGT----- CS
   PF06821.8  65 gclavlhaaelqsrakvagalLVApadveeeaaalkklaefaplpre 111
                 g +++l +a+++ + +v +alL A  dv++++++ ++    a+ + +
  MMETSP1325-20131115|6388_1  26 GGVTALMWASQNGHVAVVRALLAANSDVNKTSERGQTALMIAAGSGH 72 
                 567899999999999*************8776666655555544443 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.04
                 HH---SS-E--EEEE----..S--TT-G CS
   PF06821.8  73 aelqsrakvagalLVApadveeeaaalk 100
                 a+   + +v +alL A adv+ +a+ + 
  MMETSP1325-20131115|6388_1  67 AAGSGHVEVVTALLQANADVD-KADDDG 93 
                 446677788999999999986.333333 PP

  == domain 4    score: 0.1 bits;  conditional E-value: 0.24
                 HH---SS-E--EEEE----.. CS
   PF06821.8  73 aelqsrakvagalLVApadve 93 
                 a+ + + +v +alL A ++++
  MMETSP1325-20131115|6388_1 100 ASEKGHIHVVNALLQANPKPD 120
                 334555567777777777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 679.78
//
Query:       MMETSP1325-20131115|6391_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.40s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 161.29
//
Query:       MMETSP1325-20131115|6393_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|6390_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0062   16.5   0.7     0.0083   16.1   0.5    1.2  1  PF01814.18 Hemerythrin HHE cation binding domain


Domain annotation for each model (and alignments):
>> PF01814.18  Hemerythrin HHE cation binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.5   6.1e-07    0.0083      45     123 ..       9      84 ..       5      93 .. 0.69

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 6.1e-07
                 HHHHHHHHHHHHHH...........-TTHH...........HHHHHHHHHHHH-----SS--HHH...........HHHHHHHHHHHH-- CS
  PF01814.18  45 eelerHhakEEell...........fPalerddpagrevldrlekeHdeirelleelkealrdlaaeeaaaelaelleelaewlrrHiak 123
                 ee++ H+++EE+l+           f a            +++ k+H +i ++l++  e++++++    a+  a  +++  + + +H a+
  MMETSP1325-20131115|6390_1   9 EEFKEHFTHEEDLMhehdfgteggqFSAA-----------ASHAKDHARILKVLSDEIERTKSVS---NAKISAGFIKRVVDEFGNHAAR 84 
                 7899**********644433333333333...........69**********9999988888888...5555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 474.38
//
Query:       MMETSP1325-20131115|6394_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-29  101.5   0.0    2.1e-29  101.3   0.0    1.1  1  PF00298.14 Ribosomal protein L11, RNA binding domain


Domain annotation for each model (and alignments):
>> PF00298.14  Ribosomal protein L11, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.3   0.0   1.5e-33   2.1e-29       2      69 .]       2      71 ..       1      71 [. 0.98

  Alignments for each domain:
  == domain 1    score: 101.3 bits;  conditional E-value: 1.5e-33
                ---TTTHHHHC-----------------EETTHHHHHHHHCTTTS..S-SSSTTHHHTT---TTT----E CS
  PF00298.14  2 tPpasvlLkkaagiekGsgkpgkekvGkitlkqvyeIAkiKksdl..naldleaavksiiGtArsmGikV 69
                +Pp+s++Lk+aag++kG ++pg+e vG++t kq+yeIAkiK++d+   +  l++ ++siiGtA smGi+V
  MMETSP1325-20131115|6394_1  2 SPPTSWFLKNAAGLDKGTTRPGHEMVGEVTTKQIYEIAKIKQQDEhlAHVPLKGLCRSIIGTAGSMGITV 71
                8********************************************9999*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 474.17
//
Query:       MMETSP1325-20131115|6395_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.8e-05   23.9   0.0    4.2e-05   23.4   0.0    1.3  1  PF03079.9 ARD/ARD' family


Domain annotation for each model (and alignments):
>> PF03079.9  ARD/ARD' family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   3.1e-09   4.2e-05     134     157 .]       1      24 [.       1      24 [. 0.96

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 3.1e-09
   PF03079.9 134 rFtltednkvkalRlFvekekwva 157
                 rFt ++dn+++a+RlF++ ++w++
  MMETSP1325-20131115|6395_1   1 RFTCDNDNYIHAMRLFKGVPVWTP 24 
                 8*********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 213.49
//
Query:       MMETSP1325-20131115|6396_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.60
# Mc/sec: 391.40
//
Query:       MMETSP1325-20131115|6398_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 408.27
//
Query:       MMETSP1325-20131115|6400_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 145.66
//
Query:       MMETSP1325-20131115|6397_1  [L=361]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   14.5   1.1      0.019   14.5   0.8    3.0  3  PF04360.7 Serglycin


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   6.7      0.43   5.8e+03      93     104 ..       2      13 ..       1      27 [. 0.46
   2 ?   -9.1   6.5         1   1.4e+04      92     104 ..      34      46 ..      13      56 .. 0.52
   3 ?   14.5   0.8   1.4e-06     0.019      80     120 ..      96     136 ..      70     162 .. 0.72

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 0.43
   PF04360.7  93 gsgsgsGsGsGs 104
                 gsgsgsG G G 
  MMETSP1325-20131115|6397_1   2 GSGSGSGGGGGP 13 
                 333333333332 PP

  == domain 2    score: -9.1 bits;  conditional E-value: 1
   PF04360.7  92 sgsgsgsGsGsGs 104
                 s s  g G G G 
  MMETSP1325-20131115|6397_1  34 SSSSNGGGGGGGR 46 
                 2233333333333 PP

  == domain 3    score: 14.5 bits;  conditional E-value: 1.4e-06
   PF04360.7  80 dlnev.fplsedysgsgsgsGsGsGsgsGsGflaeleqeyqp 120
                  l+ + fp+  d +g g gsG G G gsGsG   ++      
  MMETSP1325-20131115|6397_1  96 MLDSFaFPMDGDDAGQG-GSGHGNGNGSGSGHTDDFVDGEDG 136
                 4444339**99998887.899999999999998887554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.52
# Mc/sec: 1663.62
//
Query:       MMETSP1325-20131115|6402_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.095   11.7   0.0       0.13   11.2   0.0    1.2  1  PF06557.6 Protein of unknown function (DUF1122)


Domain annotation for each model (and alignments):
>> PF06557.6  Protein of unknown function (DUF1122)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   9.6e-06      0.13      77     107 ..      55      85 ..      48      91 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 9.6e-06
   PF06557.6  77 gpggrlfveYvkDketleelqkgvspadtrL 107
                 gp+ +++v++++Dk+t+ ++  g+ ++ + L
  MMETSP1325-20131115|6402_1  55 GPSFKIYVKHLWDKRTAASIGTGIDASRADL 85 
                 7889*******************99887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 535.36
//
Query:       MMETSP1325-20131115|6404_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0042   16.1   1.0     0.0046   15.9   0.7    1.1  1  PF00261.15 Tropomyosin
     0.0069   14.8   4.2     0.0088   14.5   2.9    1.1  1  PF03148.9  Tektin family
     0.0081   14.7   0.5     0.0081   14.7   0.3    1.0  1  PF08317.6  Spc7 kinetochore protein
     0.0086   16.0   1.4     0.0099   15.8   1.0    1.1  1  PF06818.10 Fez1
  ------ inclusion threshold ------
       0.01   15.6   1.7      0.013   15.3   1.2    1.1  1  PF10392.4  Golgi transport complex subunit 5
      0.012   14.4   1.4      0.015   14.1   1.0    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.02   14.5   4.6      0.028   14.1   1.3    2.0  2  PF12329.3  TATA element modulatory factor 1 DNA binding
       0.02   13.9   1.8      0.023   13.7   1.2    1.0  1  PF04582.7  Reovirus sigma C capsid protein
      0.024   14.3   1.2      0.027   14.1   0.8    1.1  1  PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
      0.037   14.0   5.5      0.052   13.5   3.8    1.3  1  PF13747.1  Domain of unknown function (DUF4164)
       0.04   12.5   0.2      0.046   12.3   0.1    1.1  1  PF12777.2  Microtubule-binding stalk of dynein motor
      0.044   13.6   0.9        0.4   10.5   0.1    2.0  2  PF06657.8  Centrosome microtubule-binding domain of Cep57
      0.052   13.4   2.1      0.063   13.1   1.4    1.1  1  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
      0.067   12.8   2.8      0.083   12.5   1.9    1.1  1  PF08614.6  Autophagy protein 16 (ATG16)
      0.075   12.7   1.6       0.09   12.4   1.1    1.1  1  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
      0.086   12.6   7.7        1.3    8.8   0.4    2.1  2  PF09486.5  Bacterial type III secretion protein (HrpB7)
      0.097   12.5   2.8       0.12   12.2   2.0    1.2  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.11   12.4   1.2       0.17   11.8   0.9    1.3  1  PF02050.11 Flagellar FliJ protein
       0.13   12.1   0.1       0.13   12.1   0.1    2.1  2  PF10458.4  Valyl tRNA synthetase tRNA binding arm
       0.17   11.0   3.0       0.19   10.8   2.1    1.0  1  PF00529.15 HlyD family secretion protein
       0.17   11.5   3.7       0.26   10.9   2.3    1.5  1  PF07321.7  Type III secretion protein YscO
       0.17   11.5   3.2        0.2   11.3   0.2    2.3  2  PF06698.6  Protein of unknown function (DUF1192)
        0.2   10.7   2.2       0.21   10.6   1.5    1.0  1  PF10234.4  Clusterin-associated protein-1
        0.2   11.2   3.0       0.55    9.8   2.0    1.7  1  PF12325.3  TATA element modulatory factor 1 TATA binding
       0.22   11.2   2.7       0.69    9.5   0.1    2.0  2  PF01920.15 Prefoldin subunit
       0.24   10.8   4.1       0.29   10.6   2.8    1.1  1  PF04156.9  IncA protein
       0.31   10.9   5.6        6.1    6.8   0.0    2.4  2  PF08898.5  Domain of unknown function (DUF1843)
        0.4    8.7   4.9       0.43    8.6   3.4    1.0  1  PF05911.6  Plant protein of unknown function (DUF869)
        0.4   10.5   3.0        1.7    8.4   0.1    2.0  2  PF13863.1  Domain of unknown function (DUF4200)
       0.49    7.5   4.3       0.52    7.4   3.0    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
       0.71   10.2   6.7        1.9    8.8   0.2    2.1  2  PF13600.1  N-terminal domain of unknown function (DUF4140)


Domain annotation for each model (and alignments):
>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.7     1e-05    0.0046       5      70 ..      13      78 ..       9      95 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1e-05
  PF00261.15  5 qleeeldkaeerleeakekleeaekraekaeaEvaslnrriqllEeelerseerleealekLeeae 70
                ++e  l++a+++l++ +++l   ++ + +   Eva ln  +  l++el +s   le+ ++ L+  e
  MMETSP1325-20131115|6404_1 13 EIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQASE 78
                688899999999999999999999999999999999999999999999999999999998887766 PP

>> PF03148.9  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   2.9     2e-05    0.0088     290     355 ..      13      75 ..       6      79 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 2e-05
   PF03148.9 290 dkeaplkvaqtRLenRtqRpnvElCrDeaqyrLvkEvkeleetieaLkeklaeaeaslkaLeetra 355
                 + ea+l+ aqt L++Rt   +v   r ++ y+L  Ev+ l++ +++L+++l ++ a+l++++ + +
  MMETSP1325-20131115|6404_1  13 EIEAALESAQTELAARTAELGV---RKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQ 75 
                 66899999********986665...99******************************999987765 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.3   1.8e-05    0.0081     209     268 ..      16      75 ..       2      96 .] 0.69

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.8e-05
   PF08317.6 209 eeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekile 268
                   le+++ eL++++ ++  +++ +  l+ e+  l+++++ l++++s+  + +++ +  l+
  MMETSP1325-20131115|6404_1  16 AALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQ 75 
                 467888888888888888888888888888888888888888877776666655554332 PP

>> PF06818.10  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.0   2.2e-05    0.0099      18      77 ..      17      76 ..       3      85 .. 0.68

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.2e-05
  PF06818.10 18 qLkesqaelaqkaseilsLraqlrearaelqeseeklqelkdalrtktleLevceneLqr 77
                 L  +q+ela +++e+ + +  +   r e+   + ++++l++ l+  t+ Le c+  Lq 
  MMETSP1325-20131115|6404_1 17 ALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQA 76
                456667777777777766666677777777777777777777777777777777777764 PP

>> PF10392.4  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   1.2   2.9e-05     0.013      44     110 ..       9      75 ..       4      79 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 2.9e-05
   PF10392.4  44 eldkrlrqlitsnhleLlehlskskslssvlselksslesLsasyerlkskvlepyeeaeklqsalk 110
                 e +++++  + s ++eL +++ +    ++v+ +l+ ++++L+  + rl++++++  + +e+ q++l+
  MMETSP1325-20131115|6404_1   9 EARSEIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQ 75 
                 567899******************************************************9999987 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.0   3.4e-05     0.015      35      96 ..       6      77 ..       2      80 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.4e-05
   PF10186.4 35 eketlkkkveealeeaene..........kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieel 96
                 k + ++++e+ale+a++e          +k+ +  l+leva+ +++ +++ + +++ ++ +e++++++++ 
  MMETSP1325-20131115|6404_1  6 TKVEARSEIEAALESAQTElaartaelgvRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQAS 77
                566789999999998888899999999999999999999999999999999999999999999999998865 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.2      0.58   2.6e+02      43      58 ..      16      31 ..       2      37 .. 0.53
   2 ?   14.1   1.3   6.3e-05     0.028      35      73 ..      39      77 ..      22      78 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.58
   PF12329.3 43 kelekeieelkkklek 58
                ++le+ ++el ++ ++
  MMETSP1325-20131115|6404_1 16 AALESAQTELAARTAE 31
                3344444444444433 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 6.3e-05
   PF12329.3 35 ikkLrkknkelekeieelkkkleklekeleeleerlkra 73
                + +Lr +++ l+ e+++l+++l+k+++ le+ +++l + 
  MMETSP1325-20131115|6404_1 39 VYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQAS 77
                668*******************************99876 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.2   5.2e-05     0.023      52     123 ..       5      76 ..       1      79 [. 0.88

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 5.2e-05
   PF04582.7  52 ssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevda 123
                 s+ ++  s+++a+l+   + l+  +ael   ++ v +l+  v+ l  e+a l +  s+ +a+l + q + +a
  MMETSP1325-20131115|6404_1   5 STKVEARSEIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQA 76 
                 556677799*******************99999999******************999999999999998876 PP

>> PF05852.6  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.8   6.2e-05     0.027      50     116 ..       5      71 ..       1      82 [. 0.84

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 6.2e-05
   PF05852.6  50 leklkkekelkekvssleteieekkkelelLkkfdrkklerleaLtdrveelkeelefelerleaee 116
                   k++ ++e+++ ++s++te+++++ el+  k++ +    ++ +L d+v+ l++el++  ++le+ +
  MMETSP1325-20131115|6404_1   5 STKVEARSEIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQ 71 
                 56789999**********************9998877777899**************9988887542 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   3.8   0.00012     0.052       8      66 ..       9      71 ..       2      76 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 0.00012
   PF13747.1  8 aalkrLeaaldsLesaverrleaerkr....deleaeiqaldadrsrLaqeLdkaearaerle 66
                +a  ++eaal+s  + +  r+ +   r     +l+ e+++l+++ +rL++eL k++a +e+ +
  MMETSP1325-20131115|6404_1  9 EARSEIEAALESAQTELAARTAELGVRkqvvYSLRLEVARLNDEVARLNNELSKSTATLENCQ 71
                678889999999999999999988888666688999*******************99888765 PP

>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1    0.0001     0.046     218     276 ..      20      78 ..       7      86 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.0001
   PF12777.2 218 pkrqalekanaelaaaqeklaaikakiaelnanlaeltarfekatadklkcqqeaeata 276
                   +  l   +ael   ++ +  ++  +a+ln+++a+l  ++ k+ta    cq   +a++
  MMETSP1325-20131115|6404_1  20 SAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQASE 78 
                 334445555666666666677788899*************************9877765 PP

>> PF06657.8  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.44     2e+02      45      66 ..       4      25 ..       2      33 .. 0.83
   2 ?   10.5   0.1    0.0009       0.4      19      52 ..      46      79 ..      35      81 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.44
   PF06657.8 45 aslskrkrkeLaqeleellkrl 66
                as +++ r e++  le  + +l
  MMETSP1325-20131115|6404_1  4 ASTKVEARSEIEAALESAQTEL 25
                6888999999999999998887 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.0009
   PF06657.8 19 lkeLeDElehlkmeyqeladelkkldaslskrkr 52
                ++ L DE++ l+ e+++  ++l+  +asl+ ++r
  MMETSP1325-20131115|6404_1 46 VARLNDEVARLNNELSKSTATLENCQASLQASER 79
                67899************************99998 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.4   0.00014     0.063      28      91 ..      13      76 ..       3      81 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 0.00014
   PF10473.4 28 nLErELelseenqelvileaenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqe 91
                ++E  Le+++++     +e+   k++v +L+ ++ +++ e+ +L+ +L + +   en + +lq 
  MMETSP1325-20131115|6404_1 13 EIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQA 76
                58999***********************************************999999999986 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.9   0.00019     0.083     113     169 ..      13      69 ..       2      79 .. 0.58

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00019
   PF08614.6 113 ekekelaelqseiksleeeikdleeelkekekaletlqDElaslnlelslleeklsk 169
                 e e+ l++ q+e+++ ++e+  +++++  +   +++l+DE a ln els  ++ l++
  MMETSP1325-20131115|6404_1  13 EIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLEN 69 
                 334556666666666666666666666666666666666666666666655444443 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.1    0.0002      0.09      51     117 ..      11      76 ..       1      79 [. 0.55

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.0002
   PF04513.7  51 sedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsiltnLlssvtNinstLnnllqalnn 117
                  ++++++l++ +t+l++ +++L    + +  +lr e   ln +++ L++++    +tL+n  ++l++
  MMETSP1325-20131115|6404_1  11 RSEIEAALESAQTELAARTAELGVRKQ-VVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQA 76 
                 344444444444444444444444322.225777777777777777777777777777776666554 PP

>> PF09486.5  Bacterial type III secretion protein (HrpB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   1.5    0.0084       3.7      86     116 ..       9      39 ..       4      50 .. 0.67
   2 ?    8.8   0.4    0.0029       1.3      18      48 ..      47      77 ..      42      80 .. 0.66

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0084
   PF09486.5  86 eelaaaeqavaaarqalqakvaelaavrrei 116
                 e+   +e+a+  a+ +l+a+ ael+  ++ +
  MMETSP1325-20131115|6404_1   9 EARSEIEAALESAQTELAARTAELGVRKQVV 39 
                 5556677777777777777777777777655 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0029
   PF09486.5 18 erlraelsalraalealdrelaecraaveak 48
                +rl++e++ l  +l +  + l++c+a ++a 
  MMETSP1325-20131115|6404_1 47 ARLNDEVARLNNELSKSTATLENCQASLQAS 77
                5677777777777777777777777766665 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.0   0.00028      0.12      36     103 ..       9      73 ..       1      76 [. 0.81

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00028
                 HHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
  PF02403.17  36 eerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelekllls 103
                 e+r e++++le++q+e  + ++e+g  k+    + +l+ ev+ l++e++ l++el++ +a le+   s
  MMETSP1325-20131115|6404_1   9 EARSEIEAALESAQTELAARTAELGVRKQ---VVYSLRLEVARLNDEVARLNNELSKSTATLENCQAS 73 
                 67889999999999999999999999986...578888888888888888888888888888876655 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.9   0.00038      0.17      30      91 ..      13      76 ..       2      81 .. 0.45

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00038
  PF02050.11 30 eyrqqlsgsm.q.glsaaelrnyqafisaldeaiaqqqqeleqaekqveqareewqeanqelkk 91
                e +  l++ + +  +  ael   ++ + +l+ ++a+   e++++++++++    +  ++  l++
  MMETSP1325-20131115|6404_1 13 EIEAALESAQtElAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQA 76
                3333333333333344455555555555555555555555555555555555555444444433 PP

>> PF10458.4  Valyl tRNA synthetase tRNA binding arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.4       1.1     5e+02      38      65 ..       5      32 ..       2      33 .. 0.68
   2 ?   12.1   0.1   0.00031      0.13       3      27 ..      50      74 ..      45      78 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 1.1
   PF10458.4 38 aeVVeeekaklaeleeqleklkerLsqL 65
                   Ve+  + +a+le+ ++ l +r ++L
  MMETSP1325-20131115|6404_1  5 STKVEARSEIEAALESAQTELAARTAEL 32
                5567777777777777777777776665 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00031
   PF10458.4  3 ekeraRLeKelaklekeierlqkKL 27
                 +e+aRL++el k ++ +e +q  L
  MMETSP1325-20131115|6404_1 50 NDEVARLNNELSKSTATLENCQASL 74
                6899**************9999766 PP

>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.1   0.00043      0.19     117     195 ..       3      79 ..       1      88 [. 0.83

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00043
                 TTEEE-S--.-----BSS-B---------S-SEEEEEESSEEEEEEE-HHHHHHHHHHHH-----B----EE-EEEEE- CS
  PF00529.15 117 saeaalpaslgsikasqatlgalltnlqaqglaakaqldeaklqlaqtaaelarsirapaqgervqeesklrsvqvgee 195
                 +a + ++a+  +i+a++ +++ +l++  a++ ++k+ +++++l++a+++ e+ar++ + ++   ++ e+ ++s+q  e+
  MMETSP1325-20131115|6404_1   3 AASTKVEAR-SEIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKS-TATLENCQASLQASER 79 
                 455555566.7799999999999999999999********************9999999999.8888888888887776 PP

>> PF07321.7  Type III secretion protein YscO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.3   0.00059      0.26      68     116 ..      31      79 ..      11      81 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00059
   PF07321.7  68 eleklqqqvgllrekeaelesqlaeakqrleaererlrqarkqlqeark 116
                 el   +q v +lr  +a+l+ ++a  +++l +  + l++++  lq+ ++
  MMETSP1325-20131115|6404_1  31 ELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQASER 79 
                 4555567777888888888888888888888888888888888887655 PP

>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.89   3.9e+02      23      32 ..      22      31 ..       8      39 .. 0.64
   2 ?   11.3   0.2   0.00046       0.2      28      52 ..      44      68 ..      36      79 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.89
   PF06698.6 23 veELeeRIal 32
                ++EL++R a 
  MMETSP1325-20131115|6404_1 22 QTELAARTAE 31
                3455555544 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00046
   PF06698.6 28 eRIalLqaEIaRleaalakkkasra 52
                  +a L +E+aRl+++l+k +a+++
  MMETSP1325-20131115|6404_1 44 LEVARLNDEVARLNNELSKSTATLE 68
                5578888888888888888888765 PP

>> PF10234.4  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.5   0.00048      0.21     151     217 ..      11      71 ..       1      81 [. 0.50

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00048
   PF10234.4 151 qkalsrplelaevekalkeaikelaeelqklkaelenlksdeanLeekiekkkqelertqkrLkalq 217
                 ++ ++ +le a++e a +      ++el   k+ + +l+ + a+L++ + + ++el ++   L++ q
  MMETSP1325-20131115|6404_1  11 RSEIEAALESAQTELAAR------TAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQ 71 
                 223333344444444443......3344444566666666666666666666666666666665554 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.0    0.0012      0.55      33      69 ..      39      75 ..       2      81 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0012
   PF12325.3 33 laslkeelarLekerdeareEivklteeneelkekkk 69
                + sl+ e+arL+ e  ++++E++k t ++e+ +++ +
  MMETSP1325-20131115|6404_1 39 VYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQ 75
                5677778888888888888888888888888776554 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.2       0.3   1.3e+02      61      80 ..       8      27 ..       3      39 .. 0.64
   2 ?    9.5   0.1    0.0016      0.69      65     101 ..      40      76 ..      33      79 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.3
                HHHHHHHHHHHHHHHHHHHH CS
  PF01920.15 61 eevkeeLeerketlekeikt 80
                 e+++e e+ +e++++e+ +
  MMETSP1325-20131115|6404_1  8 VEARSEIEAALESAQTELAA 27
                55666666666666666554 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.0016
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF01920.15  65 eeLeerketlekeiktlekqleklekeleelkeelyk 101
                   L  + ++l+ e+ +l+++l+k  ++le+ +++l++
  MMETSP1325-20131115|6404_1  40 YSLRLEVARLNDEVARLNNELSKSTATLENCQASLQA 76 
                 566777889999*********************9996 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.8   0.00065      0.29     109     176 ..       9      76 ..       2      81 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00065
   PF04156.9 109 seledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqr 176
                 +  +++e +le++q+el +  ++l   ++ +++l+ e+++l +e+ +l++e+ + + +le +q+ lq+
  MMETSP1325-20131115|6404_1   9 EARSEIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQASLQA 76 
                 55577888899999999999999999999999999999999977777777777777777777666664 PP

>> PF08898.5  Domain of unknown function (DUF1843)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   1.8     0.048        21      26      48 ..       4      26 ..       1      31 [. 0.83
   2 ?    6.8   0.0     0.014       6.1      36      51 ..      42      57 ..      35      63 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.048
   PF08898.5 26 aeqqlaeadelaaAlekLkaEIa 48
                a    + + e++aAle +++E a
  MMETSP1325-20131115|6404_1  4 ASTKVEARSEIEAALESAQTELA 26
                566678899************98 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.014
   PF08898.5 36 laaAlekLkaEIarlE 51
                l+ +++ L+ E+arl 
  MMETSP1325-20131115|6404_1 42 LRLEVARLNDEVARLN 57
                7889999999999986 PP

>> PF05911.6  Plant protein of unknown function (DUF869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.4   0.00097      0.43      82     147 ..       6      71 ..       1      79 [. 0.79

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00097
   PF05911.6  82 elekvkaeLekkleelekelaraaaendalsrsLeekeklivelseeksraeaeledlkakLesae 147
                  + ++++e+e+ le++++ela+ +ae     +++ +    + +l++e +r++ el + +a+Le ++
  MMETSP1325-20131115|6404_1   6 TKVEARSEIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTATLENCQ 71 
                 344566699999999999999999999988888888888888888888888888888888888876 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.3      0.28   1.2e+02      69      95 ..       4      30 ..       1      39 [. 0.60
   2 ?    8.4   0.1    0.0038       1.7      79     108 ..      42      71 ..      34      72 .. 0.91

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.28
   PF13863.1 69 aeeekkekkekeeeikklkaqleelka 95
                a ++ +++ e+e+ +++++++l++ +a
  MMETSP1325-20131115|6404_1  4 ASTKVEARSEIEAALESAQTELAARTA 30
                555666666666666666666655444 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0038
   PF13863.1  79 keeeikklkaqleelkaeiekleekleeyq 108
                 +  e+++l++++++l++e +k  ++le++q
  MMETSP1325-20131115|6404_1  42 LRLEVARLNDEVARLNNELSKSTATLENCQ 71 
                 67799***********************98 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   3.0    0.0012      0.52     617     678 ..       5      66 ..       1      79 [. 0.82

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0012
   PF12128.3 617 qsaeakqkqaeeqlkqlnaeleeakravaeakqalkqarlelqrlkneqqslkdklekalae 678
                  ++++ ++++e++l++++ el ++ +++  +kq +   rle+ rl++e  +l+++l k++a 
  MMETSP1325-20131115|6404_1   5 STKVEARSEIEAALESAQTELAARTAELGVRKQVVYSLRLEVARLNDEVARLNNELSKSTAT 66 
                 56788889999999999999999999999999999999999999999999999998888764 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.1     0.038        17      67      98 ..       6      37 ..       1      43 [. 0.77
   2 ?    8.8   0.2    0.0044       1.9      73     101 ..      40      68 ..      32      79 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.038
   PF13600.1 67 aaseelaeleaelraledelarleaekealea 98
                ++ e+ +e+ea+l++++ ela+  ae+ + ++
  MMETSP1325-20131115|6404_1  6 TKVEARSEIEAALESAQTELAARTAELGVRKQ 37
                55678899999999999999999998877765 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0044
   PF13600.1  73 aeleaelraledelarleaekealearia 101
                  +l+ e+ +l+de+arl++e++   a+++
  MMETSP1325-20131115|6404_1  40 YSLRLEVARLNDEVARLNNELSKSTATLE 68 
                 34444555555555555555554444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       866  (0.0633411); expected 273.4 (0.02)
Passed bias filter:                      736  (0.0538327); expected 273.4 (0.02)
Passed Vit filter:                       122  (0.00892335); expected 13.7 (0.001)
Passed Fwd filter:                        31  (0.00226741); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              31  [number of targets reported over threshold]
# CPU time: 0.45u 0.47s 00:00:00.92 Elapsed: 00:00:00.65
# Mc/sec: 353.92
//
Query:       MMETSP1325-20131115|6405_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.058   12.9   0.2       0.11   12.0   0.1    1.5  1  PF04480.7 Protein of unknown function (DUF559)


Domain annotation for each model (and alignments):
>> PF04480.7  Protein of unknown function (DUF559)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   8.3e-06      0.11      51      84 ..      10      43 ..       5      51 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.3e-06
   PF04480.7 51 lkaklivelDGaqhaeeeeyDaeRtelLeslGft 84
                +++k++++ DG+  +e e +Da+ +e+L s G +
  MMETSP1325-20131115|6405_1 10 CRKKVVMDQDGNVRDEIEPHDARADEILMSDGTK 43
                5789*************************99966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 415.97
//
Query:       MMETSP1325-20131115|6408_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 392.51
//
Query:       MMETSP1325-20131115|6409_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   14.5   0.1      0.025   13.5   0.0    1.6  1  PF08563.6 P53 transactivation motif


Domain annotation for each model (and alignments):
>> PF08563.6  P53 transactivation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.8e-06     0.025       8      15 ..      41      48 ..      41      50 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.8e-06
   PF08563.6  8 lPLSQETF 15
                +P+SQETF
  MMETSP1325-20131115|6409_1 41 APMSQETF 48
                5******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 370.76
//
Query:       MMETSP1325-20131115|6412_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.34s 00:00:00.61 Elapsed: 00:00:00.48
# Mc/sec: 184.72
//
Query:       MMETSP1325-20131115|6410_1  [L=265]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.005   15.8   3.7        4.7    6.3   0.0    3.6  3  PF10845.3  Protein of unknown function (DUF2576)
  ------ inclusion threshold ------
      0.011   15.1  20.6       0.38   10.1   0.9    3.4  3  PF12081.3  GldM N-terminal domain
      0.012   15.7   3.3      0.012   15.7   2.3    4.6  3  PF06005.7  Protein of unknown function (DUF904)
      0.048   13.2   0.3      0.048   13.2   0.2    3.3  3  PF03836.10 RasGAP C-terminus
       0.68    9.7  29.5      0.099   12.4   0.7    5.1  4  PF08826.5  DMPK coiled coil domain like
        2.6    7.7  30.3       0.27   10.8   1.3    6.1  7  PF02183.13 Homeobox associated leucine zipper
        3.5    5.6   9.8       0.16   10.1   2.1    2.0  2  PF01411.14 tRNA synthetases class II (A)
        3.5    6.2  11.1        4.7    5.7   7.7    1.4  1  PF12166.3  Protein of unknown function (DUF3595)
        3.7    7.2  11.4        1.6    8.3   0.0    4.6  5  PF07558.6  Shugoshin N-terminal coiled-coil region
        4.5    5.9  31.9       0.35    9.6   5.8    2.2  2  PF14362.1  Domain of unknown function (DUF4407)
          9    6.6  24.1         12    6.2   0.1    4.3  5  PF09177.6  Syntaxin 6, N-terminal


Domain annotation for each model (and alignments):
>> PF10845.3  Protein of unknown function (DUF2576)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.1    0.0076       9.4      17      26 ..     111     120 ..     108     130 .. 0.85
   2 ?    2.9   0.3     0.045        56      14      35 ..     146     166 ..     139     169 .. 0.84
   3 !    6.3   0.0    0.0038       4.7       2      30 ..     172     200 ..     171     206 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0076
   PF10845.3  17 kRelNSLRrs 26 
                 +Rel SLRr+
  MMETSP1325-20131115|6410_1 111 RRELESLRRE 120
                 8********7 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.045
   PF10845.3  14 eQlkRelNSLRrsVHeLCtRSt 35 
                 + lk +l  LR++  eL  RS+
  MMETSP1325-20131115|6410_1 146 QRLKQDLEALRHE-RELSRRSS 166
                 579********98.68998886 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.0038
   PF10845.3   2 apvvasqhDYDreQlkRelNSLRrsVHeL 30 
                 a+v  ++ D    +lk e+ SLR  V eL
  MMETSP1325-20131115|6410_1 172 AAVKLAESDAKVTKLKSEIKSLRAKVSEL 200
                 56666777888889************998 PP

>> PF12081.3  GldM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.9   0.00031      0.38      40      90 ..      32      81 ..      10      93 .. 0.74
   2 ?    7.0   3.7    0.0026       3.3      15     122 ..      93     199 ..      89     216 .. 0.81
   3 ?    7.6   0.4    0.0017       2.1     104     136 ..     230     260 ..     213     264 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00031
   PF12081.3 40 akykelikkaeqvkkktselidyleklkeqlikgaegedeeyesldksdel 90
                + ++   ++ + ++  +s +id le+ k ql++  e+ +     ldk d++
  MMETSP1325-20131115|6410_1 32 ETFRTQLSTLQDLQRESSHQIDILENEKAQLLQRLENSQS-GAMLDKIDQM 81
                4456667889**************************5554.4444444444 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0026
   PF12081.3  15 esntnlekkneellaaLdvkakenpakykelikkaeqvkkktselidyleklkeqlikgaegedeeyesldksdeldavekfmlgdklskeGk.eLkkklnkYrddlka 122
                 es + ++++ne++l++ d    e+ ++  +  +    + k++se +d l++ +++l ++ e    e e  ++s+  da   + l +    +   +Lk ++++ r+++ +
  MMETSP1325-20131115|6410_1  93 ESAAAANSNNEAALSSADRRELESLRRENAQLQASGTLAKASSETNDLLAAENQRLKQDLEALRHERELSRRSSSADAQAAVKLAE-SDAK-VtKLKSEIKSLRAKVSE 199
                 6778889999*******9999999999999999999*************************8888766666666666444444444.3344.45999999999999955 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0017
   PF12081.3 104 keGkeLkkklnkYrddlkallnkeysdlllael 136
                  ++ +L+++l++Yrd +k+++ + y++  ++el
  MMETSP1325-20131115|6410_1 230 AKKAALEQELKEYRDYMKKTV-ARYKK-TISEL 260
                 4667*************9999.55555.55555 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   4.3      0.42   5.2e+02      15      71 ..      26      80 ..      10      81 .. 0.84
   2 ?   15.7   2.3   9.8e-06     0.012      24      58 ..     111     155 ..     108     162 .. 0.90
   3 ?    2.4   2.6      0.14   1.7e+02      20      48 ..     183     239 ..     175     264 .. 0.58

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.42
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTHHHHH------ CS
   PF06005.7 15 qAvdtialLqmeieeLkeeneqlkeeneeLeeenkklkeereawqerlralLgklee 71
                +A++  ++ +  ++ L++ + +++++ + Le+e  +l +  e+ q+   a+L k+++
  MMETSP1325-20131115|6410_1 26 NALQVAETFRTQLSTLQDLQRESSHQIDILENEKAQLLQRLENSQS--GAMLDKIDQ 80
                6888888889999999999899999************999999888..578888877 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 9.8e-06
                 HHHHHHHHHHHHHHH..........HHHHHHHHHHHHHHHHH--- CS
   PF06005.7  24 qmeieeLkeeneqlk..........eeneeLeeenkklkeereaw 58 
                 ++e+e L++en+ql+          e+n+ L +en++lk++ ea 
  MMETSP1325-20131115|6410_1 111 RRELESLRRENAQLQasgtlakassETNDLLAAENQRLKQDLEAL 155
                 579999999999999999999***999************999875 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHHHHHHHHH............................HHHHHHHHHH CS
   PF06005.7  20 ialLqmeieeLkeeneqlk............................eeneeLeeen 48 
                 +++L+ ei+ L+ + ++l+                             ++ +Le+e 
  MMETSP1325-20131115|6410_1 183 VTKLKSEIKSLRAKVSELQavatrpvpvdgdasaqladaearcaalmAKKAALEQEL 239
                 445555555555554444444444556666555555555555555554455555555 PP

>> PF03836.10  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   3.1       1.5   1.9e+03      59     131 ..      74     128 ..       3     139 .. 0.45
   2 ?    0.3   1.1      0.35   4.4e+02      59     128 ..     126     194 ..      97     201 .. 0.60
   3 ?   13.2   0.2   3.9e-05     0.048      50      91 ..     215     256 ..     210     264 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.5
  PF03836.10  59 tlkkLreknkyleeqldqYksyleqvletlqkkkkkkkfskqklsvkkkkkkkgkkqkfgsykysakqLeekg 131
                  l+k++++++                +++l++++    +    +s+++ + ++ +  ++ s ++  +qL+ +g
  MMETSP1325-20131115|6410_1  74 MLDKIDQMKQE--------------LVKQLAVSE----SAAAANSNNEAALSSADRRELESLRRENAQLQASG 128
                 12222222222..............222222221....23334444444444455555555555555555555 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.35
  PF03836.10  59 tlkkLreknkyleeqldqYksyleqvletlqkkkkkkkfskqklsvkkkkkkkgkkqkfgsykysakqLe 128
                 +  +L + ++  +  l++ ++ l+q le l  + + +++s+  +++  +k   ++  k+ + k   k+L 
  MMETSP1325-20131115|6410_1 126 ASGTLAKASSETNDLLAAENQRLKQDLEALRHERELSRRSSSADAQAAVKLA-ESDAKVTKLKSEIKSLR 194
                 3445556666666666666677777777777555544455555555555555.66666666666666665 PP

  == domain 3    score: 13.2 bits;  conditional E-value: 3.9e-05
  PF03836.10  50 kkElkkleqtlkkLreknkyleeqldqYksyleqvletlqkk 91 
                 +++l+  e+ +++L+ k++ le++l++Y++y +++++ ++k+
  MMETSP1325-20131115|6410_1 215 SAQLADAEARCAALMAKKAALEQELKEYRDYMKKTVARYKKT 256
                 57888889999************************9988864 PP

>> PF08826.5  DMPK coiled coil domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   3.7       6.2   7.7e+03      44      60 ..      55      71 ..       5      90 .. 0.71
   2 ?    4.5   3.4     0.023        28      18      60 ..     112     157 ..     110     163 .. 0.77
   3 ?   12.4   0.7     8e-05     0.099      25      60 ..     167     202 ..     158     203 .. 0.90
   4 ?    8.0   0.1    0.0019       2.4      30      59 ..     214     243 ..     211     245 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 6.2
   PF08826.5 44 LeeeleqLkkemEelra 60
                Le+e +qL +++E++++
  MMETSP1325-20131115|6410_1 55 LENEKAQLLQRLENSQS 71
                55555555555555543 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.023
   PF08826.5  18 eeLekvk..aanlafeskLkeaEkknreLe.eeleqLkkemEelra 60 
                 +eLe  +  +a+l+++  L  a +   +L+ +e ++Lk+++E lr 
  MMETSP1325-20131115|6410_1 112 RELESLRreNAQLQASGTLAKASSETNDLLaAENQRLKQDLEALRH 157
                 566766633588999999988877766665279999******9995 PP

  == domain 3    score: 12.4 bits;  conditional E-value: 8e-05
   PF08826.5  25 aanlafeskLkeaEkknreLeeeleqLkkemEelra 60 
                  a+ ++  kL e+ +k   L++e+++L+ ++ el+a
  MMETSP1325-20131115|6410_1 167 SADAQAAVKLAESDAKVTKLKSEIKSLRAKVSELQA 202
                 57789999***********************99997 PP

  == domain 4    score: 8.0 bits;  conditional E-value: 0.0019
   PF08826.5  30 feskLkeaEkknreLeeeleqLkkemEelr 59 
                 ++ +L +aE++  +L ++ + L +e+ e+r
  MMETSP1325-20131115|6410_1 214 ASAQLADAEARCAALMAKKAALEQELKEYR 243
                 689***********************9987 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.1   2.6e+03      27      34 ..       5      12 ..       3      20 .. 0.61
   2 ?    1.6   0.2      0.17   2.1e+02      19      36 ..      50      67 ..      49      74 .. 0.80
   3 ?   -1.7   0.1       1.8   2.2e+03      26      36 ..      80      90 ..      75      97 .. 0.72
   4 ?    6.2   0.1    0.0062       7.7      19      33 ..     112     126 ..     111     135 .. 0.89
   5 ?   10.8   1.3   0.00022      0.27      15      35 ..     139     159 ..     136     167 .. 0.86
   6 ?    6.6   0.1    0.0045       5.5      23      39 ..     185     201 ..     181     207 .. 0.55
   7 ?    0.8   0.2      0.28   3.5e+02      21      42 ..     225     246 ..     222     249 .. 0.66

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 2.1
  PF02183.13 27 EkekLrae 34
                E+++Lr +
  MMETSP1325-20131115|6410_1  5 EVDRLRQL 12
                55555554 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.17
  PF02183.13 19 aendsLqkEkekLraevl 36
                ++ d L++Ek++L+  ++
  MMETSP1325-20131115|6410_1 50 HQIDILENEKAQLLQRLE 67
                57799*******988766 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 1.8
  PF02183.13 26 kEkekLraevl 36
                + k++L ++++
  MMETSP1325-20131115|6410_1 80 QMKQELVKQLA 90
                55889998886 PP

  == domain 4    score: 6.2 bits;  conditional E-value: 0.0062
  PF02183.13  19 aendsLqkEkekLra 33 
                 +e +sL++E+++L+a
  MMETSP1325-20131115|6410_1 112 RELESLRRENAQLQA 126
                 6889*********98 PP

  == domain 5    score: 10.8 bits;  conditional E-value: 0.00022
  PF02183.13  15 daLkaendsLqkEkekLraev 35 
                 d L+aen +L+++ e+Lr e 
  MMETSP1325-20131115|6410_1 139 DLLAAENQRLKQDLEALRHER 159
                 55999************9885 PP

  == domain 6    score: 6.6 bits;  conditional E-value: 0.0045
  PF02183.13  23 sLqkEkekLraevlsLk 39 
                 +L++E ++Lra v +L+
  MMETSP1325-20131115|6410_1 185 KLKSEIKSLRAKVSELQ 201
                 45555555555555554 PP

  == domain 7    score: 0.8 bits;  conditional E-value: 0.28
  PF02183.13  21 ndsLqkEkekLraevlsLkekl 42 
                 + +L++ k++L  e+++ ++++
  MMETSP1325-20131115|6410_1 225 CAALMAKKAALEQELKEYRDYM 246
                 5567777777777777766665 PP

>> PF01411.14  tRNA synthetases class II (A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.1   0.00013      0.16     369     464 ..       9     104 ..       5     127 .. 0.82
   2 ?   -0.9   0.2      0.28   3.4e+02     405     455 ..     143     193 ..     133     245 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00013
                 HHHHHHHHHCHSSB-HHHHHHHHHH----HHHHHHHHCT---BB---TTHHHHHHHTCTCTT------...-SSSTTTTS--GEETHCCC-..... CS
  PF01411.14 369 leelikklkksktlsgedafkLydtyGfPvdltkeiaeekglkvdiegfekameeqrerskkekkekkllekdvealkelkkteeflgyeeleaea 464
                 l++l+ +++++++ ++e+a+++ +t+   + + +++ +e+  ++di ++eka+  qr ++ ++ +  +++++  ++l ++ + +e+   ++ + ea
  MMETSP1325-20131115|6410_1   9 LRQLLDQAERRAATHQENALQVAETFRTQLSTLQDLQRESSHQIDILENEKAQLLQRLENSQSGAMLDKIDQMKQELVKQLAVSESAAAANSNNEA 104
                 78888999999999*******************************************999999888888888888877777776666655544444 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.28
                 HCT---BB---TTHHHHHHHTCTCTT------...-SSSTTTTS--GEETH CS
  PF01411.14 405 aeekglkvdiegfekameeqrerskkekkekkllekdvealkelkkteefl 455
                 ae++ lk d e+ ++++e +r++s +++++  +l+++  ++ +lk++ ++l
  MMETSP1325-20131115|6410_1 143 AENQRLKQDLEALRHERELSRRSSSADAQAAVKLAESDAKVTKLKSEIKSL 193
                 556666777777777777766666666666555555555555555553333 PP

>> PF12166.3  Protein of unknown function (DUF3595)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   7.7    0.0038       4.7     135     234 ..      19     132 ..       4     257 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0038
   PF12166.3 135 eslakdeaalqflkaaskedlqlvrlpssSeslWnisppsrqqlleeLnnntntvtltvtle....ftRseaskeatktvsseqslelseetraalakalegt..........s 234
                 +  +++e+alq+ ++++++ + l  l+++S+   +i ++ ++qll++L+n ++ ++l    +    + ++ a+ e + +++s++ + ls++ r++l+++ +++          +
  MMETSP1325-20131115|6410_1  19 RAATHQENALQVAETFRTQLSTLQDLQRESSHQIDILENEKAQLLQRLENSQSGAMLDKIDQmkqeLVKQLAVSESAAAANSNNEAALSSADRRELESLRRENaqlqasgtlaK 132
                 567889999********************************************66554443333357788888888888888999***********999888544444444330 PP

>> PF07558.6  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.6     2e+03      22      33 ..      51      62 ..      36      64 .. 0.68
   2 ?    3.4   0.1     0.046        57      29      40 ..     113     124 ..     111     126 .. 0.89
   3 ?   -1.0   0.0         1   1.3e+03       9      24 ..     138     153 ..     135     159 .. 0.70
   4 ?    8.3   0.0    0.0013       1.6      26      45 ..     179     198 ..     173     199 .. 0.84
   5 ?   -2.1   0.1       2.4     3e+03       4      14 ..     252     262 ..     251     264 .. 0.69

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.6
   PF07558.6 22 kiselekevskL 33
                +i +le+e  +L
  MMETSP1325-20131115|6410_1 51 QIDILENEKAQL 62
                455666665555 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.046
   PF07558.6  29 evskLlnENvnL 40 
                 e+++L++EN++L
  MMETSP1325-20131115|6410_1 113 ELESLRRENAQL 124
                 789******998 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 1
   PF07558.6   9 NaelaknNsalsikis 24 
                 N  la  N++l++ + 
  MMETSP1325-20131115|6410_1 138 NDLLAAENQRLKQDLE 153
                 7788888888887555 PP

  == domain 4    score: 8.3 bits;  conditional E-value: 0.0013
   PF07558.6  26 lekevskLlnENvnLRelll 45 
                    +v+kL++E+ +LR +++
  MMETSP1325-20131115|6410_1 179 SDAKVTKLKSEIKSLRAKVS 198
                 5579*************997 PP

  == domain 5    score: -2.1 bits;  conditional E-value: 2.4
   PF07558.6   4 kylkqNaelak 14 
                 +y+k ++el +
  MMETSP1325-20131115|6410_1 252 RYKKTISELQR 262
                 58888888744 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9  12.0      0.12   1.5e+02     116     244 ..      17     142 ..       8     156 .. 0.70
   2 ?    9.6   5.8   0.00028      0.35     118     225 ..     157     264 ..     144     265 .] 0.84

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.12
   PF14362.1 116 ekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaq..aeletlkaqldaaqaeleankrkaaleeeraakvaeeqaan..sandGlla 244
                 e++++  ++++ qva++++++l +l++   + + ++d +++e +++ ++++  ++G         +++ + k+e ++++   +  ++++++++aa ++++  ++++ l++e+a+ +a  + a+  s++++lla
  MMETSP1325-20131115|6410_1  17 ERRAATHQENALQVAETFRTQLSTLQDLQRESSHQIDILENEKAQLLQRLENSQSGA------MLDKIDQMKQELVKQLAvsESAAAANSNNEAALSSAD-RRELESLRRENAQLQASGTLAKasSETNDLLA 142
                 5666777778888999***************************************96......4445555555555554443444444444555555555.36667777777777776666665555555543 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00028
   PF14362.1 118 qqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqce..leGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaeleankrkaaleeer 225
                 +++e +   +  +a++  kla+ +a++++l++e+++++a+v ++++ +++   ++G++++++a +  ++ +  ++ +a+++el++++   ++++a+ +  k   +l+++r
  MMETSP1325-20131115|6410_1 157 HERELSRRSSSADAQAAVKLAESDAKVTKLKSEIKSLRAKVSELQAVATRPvpVDGDASAQLADAEARCAALMAKKAALEQELKEYRDYMKKTVARYK--KTISELQRNR 264
                 455555566667779999***************************999986226788999999999*********************99999999999..7777777765 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   3.3     0.088   1.1e+02      12      71 ..       4      61 ..       1      87 [. 0.82
   2 ?    0.1   0.8      0.78   9.7e+02       8      48 ..      46      89 ..      41     113 .. 0.63
   3 ?    4.1   4.2     0.045        56      15      96 ..     112     193 ..      99     194 .. 0.86
   4 ?    4.2   0.2     0.042        52      32      60 ..     171     202 ..     157     205 .. 0.74
   5 ?    6.2   0.1    0.0099        12       6      60 ..     210     262 ..     208     263 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.088
   PF09177.6 12 ksidkleslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpek 71
                +++d+l++l+++ e+   +++  +++ +  + ++++l++++    + +  +++ e+++++
  MMETSP1325-20131115|6410_1  4 AEVDRLRQLLDQAERRAATHQ--ENALQVAETFRTQLSTLQDLQRESSHQIDILENEKAQ 61
                6899********999999988..9999999999999999998888888888888887765 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.78
   PF09177.6  8 eevqksidkleslyrsweelrsdst...sskelkeltkeLenal 48
                 e +++id le+   ++ + +++s+     +++++ ++eL ++l
  MMETSP1325-20131115|6410_1 46 RESSHQIDILENEKAQLLQRLENSQsgaMLDKIDQMKQELVKQL 89
                55566677775555555555555553444566666666665544 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.045
   PF09177.6  15 dkleslyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrRkqfvaeireeikev 96 
                 ++lesl r+  +l+ ++t +k ++e+++ L ++ + +++dle L  + +++ ++++     + ++++ ++ v+++++eik++
  MMETSP1325-20131115|6410_1 112 RELESLRRENAQLQASGTLAKASSETNDLLAAENQRLKQDLEALRHERELSRRSSSADAQAAVKLAESDAKVTKLKSEIKSL 193
                 45789999999999999999999999999999**************999999988876777888999999999999999876 PP

  == domain 4    score: 4.2 bits;  conditional E-value: 0.042
   PF09177.6  32 t...sskelkeltkeLenalesiewdledLee 60 
                 +   +  e++ + ++L+++++s++ ++++L+ 
  MMETSP1325-20131115|6410_1 171 QaavKLAESDAKVTKLKSEIKSLRAKVSELQA 202
                 13357789999999***************986 PP

  == domain 5    score: 6.2 bits;  conditional E-value: 0.0099
   PF09177.6   6 vkeevqksidkleslyrsweelrsdstsskelkeltkeLenalesiewdledLee 60 
                 v  +++++++ +e  +  + + +   +  +elke+++ +++++   ++++++L++
  MMETSP1325-20131115|6410_1 210 VDGDASAQLADAEARCAALMAKKAALE--QELKEYRDYMKKTVARYKKTISELQR 262
                 667778888888888888888888866..9***********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2125  (0.155427); expected 273.4 (0.02)
Passed bias filter:                      535  (0.0391311); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        45  (0.0032914); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.48u 0.38s 00:00:01.86 Elapsed: 00:00:00.77
# Mc/sec: 824.72
//
Query:       MMETSP1325-20131115|6414_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   14.5   0.8      0.023   13.8   0.6    1.3  1  PF08693.5 Transmembrane alpha-helix domain
        2.5    5.9   9.3        2.6    5.8   6.5    1.0  1  PF02724.9 CDC45-like protein
        2.6    7.7   8.4          3    7.4   5.8    1.1  1  PF05466.7 Brain acid soluble protein 1 (BASP1 protein)
        7.7    4.9  24.6        9.1    4.7  17.0    1.1  1  PF10446.4 Protein of unknown function (DUF2457)


Domain annotation for each model (and alignments):
>> PF08693.5  Transmembrane alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.6   6.8e-06     0.023       3      19 ..      62      78 ..      60      78 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 6.8e-06
   PF08693.5  3 sdsslkttVaIAvgVvi 19
                + + + +tVa++v+Vv+
  MMETSP1325-20131115|6414_1 62 TGKENDETVAVVVAVVV 78
                8999************8 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   6.5   0.00077       2.6     107     147 ..      58      99 ..      35     102 .] 0.42

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.00077
   PF02724.9 107 ieeelekeeeerdayealvemkeeee.eesdedsdseddeee 147
                 ++ee  ke++e  a+   v  +ee++ e++d+d+d++dd+++
  MMETSP1325-20131115|6414_1  58 EDEETGKENDETVAVVVAVVVDEEDDdENEDDDDDDDDDDDD 99 
                 223333333333333333333333332222333333323222 PP

>> PF05466.7  Brain acid soluble protein 1 (BASP1 protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.8   0.00087         3      23      68 ..      50      95 ..      40     102 .] 0.75

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00087
   PF05466.7 23 kkaeGaateeegtPkeneeaqaaaettevkeakeekpekdaesten 68
                  ++G   e+e+t ken+e+ a + +  v e++++++e d ++ + 
  MMETSP1325-20131115|6414_1 50 VDTDGLDVEDEETGKENDETVAVVVAVVVDEEDDDENEDDDDDDDD 95
                5789****************99999999999666666665555433 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  17.0    0.0027       9.1      44      76 ..      58     101 ..      46     102 .] 0.69

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0027
   PF10446.4  44 eaeeealeee...........dededdeeddddeDedddddddd 76 
                 e ee   e++           de++dde++ddd+D+dddddddd
  MMETSP1325-20131115|6414_1  58 EDEETGKENDetvavvvavvvDEEDDDENEDDDDDDDDDDDDDD 101
                 34444444447888999999888888888888777766666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       683  (0.0499561); expected 273.4 (0.02)
Passed bias filter:                      467  (0.0341574); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 488.86
//
Query:       MMETSP1325-20131115|6416_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 755.37
//
Query:       MMETSP1325-20131115|6417_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-25   88.1   0.0    5.2e-25   88.0   0.0    1.0  1  PF01625.16 Peptide methionine sulfoxide reductase


Domain annotation for each model (and alignments):
>> PF01625.16  Peptide methionine sulfoxide reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.0   0.0   3.8e-29   5.2e-25      51     133 ..       2      83 ..       1      84 [] 0.97

  Alignments for each domain:
  == domain 1    score: 88.0 bits;  conditional E-value: 3.8e-29
  PF01625.16  51 aEaveveydpekvsyeellevffeihdptqlnrqgndigtqYrsaifytdeeqkkeaeelieklqkevkskkivteiepletF 133
                 +E v+v ydp+k+s+ ++l+ f+e hdpt+  +qgnd+gtqYrs+ +y+d+eqk+ +e++++k++++  +++i te+ +++++
  MMETSP1325-20131115|6417_1   2 TEGVRVVYDPDKISFVDILRWFWEAHDPTSGMGQGNDRGTQYRSGFYYFDDEQKQLIEASKAKYEQQ-LGRPITTEVAAASDY 83 
                 699****************************************************************.**********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|6415_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.058   13.4   0.0      0.097   12.7   0.0    1.3  1  PF04055.16 Radical SAM superfamily


Domain annotation for each model (and alignments):
>> PF04055.16  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   7.1e-06     0.097      89     153 ..      54     126 ..      28     127 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 7.1e-06
                 ....HHHHHHHHHTT-SEEEEEEESSSHH.....HHHHCCTCTS-HHHHHHHHHHHHHHSSET.EEEEEEEECT CS
                 x...xxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
  PF04055.16  89 d...eeileelaelgvdrvslglesgdee.....kvlklmrrghtfeevlealeklreagikr.vvdfivglpg 153
                 +   +++ + +ae+++dr+ lg + +++      ++ ++m r +++ ++++a  kl e  i+  v  f+++l+g
  MMETSP1325-20131115|6415_1  54 ScnsDDFPKQMAERHCDRIGLGGDDVHDFalpwdPIPRMMSREDPWGDFMRAQPKLVET-IEQrVGFFTPLLRG 126
                 155588899*******************************************9999999.99888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 1207.58
//
Query:       MMETSP1325-20131115|6420_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.7e-07   28.7   0.0    7.2e-07   28.6   0.0    1.0  1  PF11945.3 WAHD domain of WASH complex


Domain annotation for each model (and alignments):
>> PF11945.3  WAHD domain of WASH complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   5.3e-11   7.2e-07     150     239 ..       2      89 .]       1      89 [] 0.86

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 5.3e-11
   PF11945.3 150 eGlGsLprnlssvsslLLfnteenlykkYvt.lDplagvvtktrkalegeeeeklldaplsitkReqlerktaenyFYvPdlgdvPelDvP 239
                 eGl +Lp  l sv s+LLfn+++ +yk Y t  D l     k     e e ++ l  ap s+ +   l   +  +y Y P+lg++ +l  P
  MMETSP1325-20131115|6420_1   2 EGLARLPAYLPSVGSMLLFNSTKTPYKTYSTgFDNLMHGDAKE---QEDEGAKDLHAAPDSVLHGLALPDLSDIDYEYRPELGEMNNLGLP 89 
                 8****************************86379885544444...45567899999******99999999999**********9888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|6422_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 302.94
//
Query:       MMETSP1325-20131115|6421_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 535.91
//
Query:       MMETSP1325-20131115|6423_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-09   37.1   0.0    1.5e-09   37.1   0.0    1.0  1  PF00890.19 FAD binding domain


Domain annotation for each model (and alignments):
>> PF00890.19  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   1.1e-13   1.5e-09     293     350 ..       1      60 [.       1      63 [] 0.93

  Alignments for each domain:
  == domain 1    score: 37.1 bits;  conditional E-value: 1.1e-13
                 GS-HHHHHHHHH.HHHHH---....-.-EEEE-TT.S-HHHHCCH-HHHHHHHHHT--.... CS
  PF00890.19 293 lasrdvvsrailekeiaeggs....eanvyldadhgldaealeatleaineeaengldkdfg 350
                 lasrdvvsra++  ei+eg++    +++v+l +dh l+ae l+++l++i e+a+ ++++d  
  MMETSP1325-20131115|6423_1   1 LASRDVVSRAMT-MEIREGRGvgkeKDHVFLHLDH-LPAELLHERLPGISETAAIFAGVDVT 60 
                 69**********.*******9**************.**********************6644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|6424_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   13.1   0.5      0.067   12.7   0.3    1.1  1  PF07011.6 Protein of unknown function (DUF1313)


Domain annotation for each model (and alignments):
>> PF07011.6  Protein of unknown function (DUF1313)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3   4.9e-06     0.067      21      72 ..       3      51 ..       1      55 [. 0.86

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.9e-06
   PF07011.6 21 svLdqNrlLiqeineNhesrvadnlsrNVaLirelNgNisrVvslYsdLsas 72
                ++L++N l++ ++  N ++    +++ NVaL++    N+  V+s+ + L ++
  MMETSP1325-20131115|6424_1  3 QLLQENMLIVARMRANLQA---AQMGENVALMHKFHVNMNAVLSMVASLKVN 51
                5788888888888888775...68999******************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|6427_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.093   12.1   0.5       0.21   11.0   0.2    1.6  2  PF03020.10 LEM domain


Domain annotation for each model (and alignments):
>> PF03020.10  LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.18   2.4e+03       5      10 ..      11      16 ..      10      18 .. 0.74
   2 ?   11.0   0.2   1.5e-05      0.21       3      17 ..      35      49 ..      33      51 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.18
                CS-HHH CS
  PF03020.10  5 eLsdaE 10
                +Lsd E
  MMETSP1325-20131115|6427_1 11 QLSDPE 16
                899987 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 1.5e-05
                CCCS-HHHHHHHHCC CS
  PF03020.10  3 vaeLsdaELrseLrk 17
                +++Lsd+ELr++Lr 
  MMETSP1325-20131115|6427_1 35 LEDLSDGELRKKLRA 49
                689**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6428_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 293.89
//
Query:       MMETSP1325-20131115|6430_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 332.83
//
Query:       MMETSP1325-20131115|6431_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 235.11
//
Query:       MMETSP1325-20131115|6432_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 366.79
//
Query:       MMETSP1325-20131115|6433_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       729  (0.0533207); expected 273.4 (0.02)
Passed bias filter:                      496  (0.0362785); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 594.10
//
Query:       MMETSP1325-20131115|6429_1  [L=387]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.49
# Mc/sec: 1892.63
//
Query:       MMETSP1325-20131115|6434_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 226.56
//
Query:       MMETSP1325-20131115|6436_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 506.92
//
Query:       MMETSP1325-20131115|6437_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 341.70
//
Query:       MMETSP1325-20131115|6439_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-11   40.4   7.4    8.6e-11   40.3   5.1    1.0  1  PF00012.15 Hsp70 protein
     0.0065   15.6   1.9     0.0077   15.3   1.3    1.1  1  PF10098.4  Uncharacterized protein conserved in bacteria (DUF2336)
  ------ inclusion threshold ------
      0.064   12.8   1.5        3.9    7.1   0.0    2.3  2  PF12655.2  Domain of unknown function (DUF3787)
      0.084   11.9   0.4       0.11   11.5   0.3    1.1  1  PF09492.5  Pectic acid lyase
      0.095   12.6   1.0       0.11   12.3   0.7    1.1  1  PF13791.1  Sigma factor regulator C-terminal
       0.11   12.6   0.2       0.15   12.1   0.2    1.4  1  PF05003.7  Protein of unknown function (DUF668)
       0.15   11.7   0.2       0.18   11.3   0.1    1.1  1  PF13612.1  Transposase DDE domain
       0.25   10.6   1.2       0.29   10.4   0.8    1.1  1  PF12869.2  tRNA_anti-like
       0.27   10.6   1.8       0.31   10.4   1.2    1.0  1  PF04286.7  Protein of unknown function (DUF445)
       0.38    9.9   5.0       0.43    9.8   3.5    1.0  1  PF06246.7  Isy1-like splicing family
        0.5   10.3   2.9       0.44   10.5   1.2    1.5  1  PF09943.4  Uncharacterized protein conserved in archaea (DUF2175)


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   5.1   6.9e-14   8.6e-11     517     600 ..       2      88 ..       1      90 [. 0.95

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 6.9e-14
                 HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC.GGGSSHHHH...HHHHHHHHHHHHHHT----HHHHHHHHHHHHHCHHHHHHHH CS
  PF00012.15 517 eesaeedkkkkeaieakneleelvyslekkleee.kekvseaek...ekkveeaieelkeelegedkeeieakleelekvvekivekl 600
                 e++aeed+k++e++ea+n+le+++y l++++e++ k+k++e+++   +++v+ea+e+l+++ ++ dk+++ +k++e+e+v+ +i++k+
  MMETSP1325-20131115|6439_1   2 EQFAEEDAKNRERVEARNNLETYLYGLRSAVEDTlKDKLEEEDAeaiQTAVKEALEWLDSN-QDADKDTYDEKRKEVESVAAPIMTKV 88 
                 799*******************************99999999988999*************.7999******************9987 PP

>> PF10098.4  Uncharacterized protein conserved in bacteria (DUF2336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.3   6.2e-06    0.0077      78     158 ..       5      81 ..       2      90 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 6.2e-06
   PF10098.4  78 aaddealreallaRpdlpaavaraLlakvsealrakllaraalsaerlqravreaaeraaaelaadsrdeeeakrlvahlr 158
                 a++d++ re + aR+ l+ + +  L + v+++l++kl   + ++ae++q+av+ea e + ++ +ad+  ++e +++v+++ 
  MMETSP1325-20131115|6439_1   5 AEEDAKNRERVEARNNLE-TYLYGLRSAVEDTLKDKL---EEEDAEAIQTAVKEALEWLDSNQDADKDTYDEKRKEVESVA 81 
                 788999999999999885.68889************9...56*****************************9999999865 PP

>> PF12655.2  Domain of unknown function (DUF3787)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0031       3.9      38      51 ..      50      63 ..      48      64 .. 0.91
   2 ?    4.6   0.2     0.019        23      24      43 ..      72      91 ..      69      92 .. 0.93

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0031
   PF12655.2 38 eeVenAKeWVDnns 51
                + V++A eW D+n+
  MMETSP1325-20131115|6439_1 50 TAVKEALEWLDSNQ 63
                67***********8 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.019
   PF12655.2 24 eklkpesnVsiPseeeVenA 43
                ek k++  V++P  ++V++A
  MMETSP1325-20131115|6439_1 72 EKRKEVESVAAPIMTKVNEA 91
                7899**************99 PP

>> PF09492.5  Pectic acid lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   8.5e-05      0.11     193     228 ..      42      77 ..      30      92 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8.5e-05
                 SS--HHHHHHH-----HHHHS------------... CS
   PF09492.5 193 ekpseeilkaieaavawlekvkleglklektkeask 228
                 e+  e+i++a+++a++wl++++ +++++  +k+++ 
  MMETSP1325-20131115|6439_1  42 EEDAEAIQTAVKEALEWLDSNQDADKDTYDEKRKEV 77 
                 333489*************99999988655555433 PP

>> PF13791.1  Sigma factor regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.7   9.2e-05      0.11      49     113 ..      10      78 ..       3      92 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 9.2e-05
   PF13791.1  49 keedknlafk..ekevyGfk..aksdnleeaekkeeekkeeeFisaLkylsdheeiaekisgrkelelk 113
                 k+ +  +a++  e++ yG+    +++ +++ e++++e  ++ + +aL++l+++++ +++ + +k++e++
  MMETSP1325-20131115|6439_1  10 KNRERVEARNnlETYLYGLRsaVEDTLKDKLEEEDAEAIQTAVKEALEWLDSNQDADKDTYDEKRKEVE 78 
                 22222333335699*****9544444455556666677779999************9999888877743 PP

>> PF05003.7  Protein of unknown function (DUF668)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   0.00012      0.15      43      80 ..      27      59 ..       2      82 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00012
   PF05003.7 43 siraalrakLkevakesaldealaeewkdaleriLeWL 80
                 +r+a++  Lk+      l+e+ ae+++ a++  LeWL
  MMETSP1325-20131115|6439_1 27 GLRSAVEDTLKDK-----LEEEDAEAIQTAVKEALEWL 59
                4555555555544.....44467788888888888887 PP

>> PF13612.1  Transposase DDE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00015      0.18      69     138 ..      10      81 ..       3      89 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00015
   PF13612.1  69 dDrkpveelvkkltgklfgdkgyiskelaeeLaeqgielvtklrknmknkllslld...killrkRsiiEtvn 138
                 + r+ ve   ++l   l+g ++ ++ +l+++L+e++ e +++  k+  + l s  d    +  +kR+ +E v 
  MMETSP1325-20131115|6439_1  10 KNRERVE-ARNNLETYLYGLRSAVEDTLKDKLEEEDAEAIQTAVKEALEWLDSNQDadkDTYDEKRKEVESVA 81 
                 4444554.67899**********************99988765555444443333211146677888888875 PP

>> PF12869.2  tRNA_anti-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.8   0.00024      0.29      25      79 ..      30      84 ..       9      92 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00024
   PF12869.2 25 eayrakskadvekakaalavisaedLlaaykanevaadqkYlgkiieVeGtvsei 79
                +a++++ k + e+++a++ ++ +++ l+  ++n++a  ++Y +k+ eVe +++ i
  MMETSP1325-20131115|6439_1 30 SAVEDTLKDKLEEEDAEAIQTAVKEALEWLDSNQDADKDTYDEKRKEVESVAAPI 84
                56667777777888888778999*************************9999888 PP

>> PF04286.7  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.2   0.00025      0.31     241     309 ..      17      87 ..       2      93 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00025
   PF04286.7 241 sdlevqeseeklwealkdllkkklneee..llreilsklleklgeklaedpklreklnkflenaaakvler 309
                 ++ + ++++  l +a++d+lk+kl+ee+  ++++ ++++le+l ++   d++  +++ k++e+ aa ++++
  MMETSP1325-20131115|6439_1  17 ARNNLETYLYGLRSAVEDTLKDKLEEEDaeAIQTAVKEALEWLDSNQDADKDTYDEKRKEVESVAAPIMTK 87 
                 333444555559999**********988999************9999999999999999999999999887 PP

>> PF06246.7  Isy1-like splicing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.5   0.00034      0.43     147     214 ..       6      76 ..       1      92 [. 0.56

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00034
   PF06246.7 147 kkekkrksreelekkidadYYGyrDeedgvlleqEaeaekeaiekkveevkekkee...eeeeeekekeek 214
                 ++++k+++r e +++++   YG r   +++l ++ +e+  eai+++v+e  e  ++     +++ +ek+++
  MMETSP1325-20131115|6439_1   6 EEDAKNRERVEARNNLETYLYGLRSAVEDTLKDKLEEEDAEAIQTAVKEALEWLDSnqdADKDTYDEKRKE 76 
                 56788899999***********9766555555444444444444444444443333000333333333332 PP

>> PF09943.4  Uncharacterized protein conserved in archaea (DUF2175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.2   0.00035      0.44      55     100 ..      45      90 ..      27      91 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00035
   PF09943.4  55 delleiivlkkeleqvaeseei.kkvirqkrkelEklaakltrkiek 100
                  e  ++ v k+ le + +++++ k++ ++krke+E  aa +  k+++
  MMETSP1325-20131115|6439_1  45 AEAIQTAV-KEALEWLDSNQDAdKDTYDEKRKEVESVAAPIMTKVNE 90 
                 33444445.778888876655428899************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1175  (0.0859421); expected 273.4 (0.02)
Passed bias filter:                      874  (0.0639263); expected 273.4 (0.02)
Passed Vit filter:                       112  (0.00819193); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 523.65
//
Query:       MMETSP1325-20131115|6440_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-05   21.9   0.0      9e-05   21.7   0.0    1.2  1  PF09451.5 Autophagy-related protein 27


Domain annotation for each model (and alignments):
>> PF09451.5  Autophagy-related protein 27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   6.6e-09     9e-05     179     233 ..      35      89 ..       5     106 .. 0.86

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 6.6e-09
   PF09451.5 179 kkkdgsgddkkdgdkkgdksgswgfftWLfillvLfvaiYlivgswlnynrygar 233
                 +++++++d+++++d k+ ++++ g + +L ++++L+ ++++ + ++++yn  + +
  MMETSP1325-20131115|6440_1  35 SDGEEDEDEDEEEDAKEPQGEILGGIMTLAFIVFLGGLLFIAFIMYMEYNAESTQ 89 
                 5666777777788888888*******************************98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       705  (0.0515652); expected 273.4 (0.02)
Passed bias filter:                      579  (0.0423493); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.42s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 672.82
//
Query:       MMETSP1325-20131115|6443_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 220.07
//
Query:       MMETSP1325-20131115|6445_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 566.04
//
Query:       MMETSP1325-20131115|6444_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-07   28.5   0.1    2.1e-06   27.3   0.0    1.6  1  PF00787.19 PX domain


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   1.5e-10   2.1e-06      24     110 ..       9     100 ..       2     103 .. 0.72

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 1.5e-10
                 EEEEECS-................SCEEEEEEEHHHHHHHHHHHHHHTTTSTSTS--TTSSSHHCGTTSHHHHHHHHHHHHHHHHHHHHSCHHHHSHHHHHHH CS
  PF00787.19  24 ievelktg................akewtvkRrYsdFeeLhskLlrkfprlklPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrksevltsFL 110
                 iev+ k+                 +   +v+RrY++F +L ++L    p      lP+k +++s     ++ +++r ++L++yLqr++    + +  +l++FL
  MMETSP1325-20131115|6444_1   9 IEVQSKSRanssvdsaatatvppiEVNALVRRRYNEFLRLDHELHTGLP------LPPKLWMSS-----RSKLASRMRKLQKYLQRVCDSFAVDRLGILLQFL 100
                 44444444445555555555555566789***************87666......888888876.....9*****************9876555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.66
# Mc/sec: 711.65
//
Query:       MMETSP1325-20131115|6446_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   14.1   5.1      0.048   13.1   3.5    1.5  1  PF02361.11 Cobalt transport protein
       0.25   10.9   4.3        2.4    7.7   0.9    2.1  2  PF07332.6  Protein of unknown function (DUF1469)


Domain annotation for each model (and alignments):
>> PF02361.11  Cobalt transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   3.5     7e-06     0.048      20     138 ..      35     140 ..      29     146 .] 0.74

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7e-06
  PF02361.11  20 lvllvflpigfvflsvifllvlfvfliaklp.......saiksitlllllllfvlwfifllfgnyqdnvfsgvfvfnrgnlylirswGllravllalrvttlililllLtlTTssvelasglerll 138
                 l++++++ ++ ++  +i+ l  +++++a+ +       + i +i+ +  +l++++ +++ll          ++ +fn+ n      +G++ a++++l vt         +++Ts+v l+++++r++
  MMETSP1325-20131115|6446_1  35 LTCVTVMLSDQHATFFIVTLAAAILAVAAQTqlrphrdQDIDAIFTVSHWLVLLTTLTLLLR---------DTSMFNGKN--IWLADGVMLAIIFLLAVT---------VSSTSFVHLFHEVRRIG 140
                 6666777777777766777777777777776899****************************.........788999999..333455555555555555.........66777777777777766 PP

>> PF07332.6  Protein of unknown function (DUF1469)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0    0.0043        30      78      98 ..      48      68 ..      33      73 .. 0.69
   2 ?    7.7   0.9   0.00036       2.4      45      89 ..      77     124 ..      75     138 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0043
   PF07332.6 78 vavvllllAgilalvgkrrlk 98
                ++ ++ l+A+ila ++  +l+
  MMETSP1325-20131115|6446_1 48 TFFIVTLAAAILAVAAQTQLR 68
                455666677777777777766 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.00036
   PF07332.6  45 lvlalvallvllaalvaaLaealvl...pawlAalivavvllllAgil 89 
                 +++++  +lvll++l+++L +  ++   + wlA +++ ++++llA+ +
  MMETSP1325-20131115|6446_1  77 AIFTVSHWLVLLTTLTLLLRDTSMFngkNIWLADGVMLAIIFLLAVTV 124
                 678888999**********888887888899*************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       685  (0.0501024); expected 273.4 (0.02)
Passed bias filter:                      395  (0.0288912); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 699.74
//
Query:       MMETSP1325-20131115|6447_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.32s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 604.08
//
Query:       MMETSP1325-20131115|6450_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|6453_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-11   41.6   0.1    1.5e-10   40.8   0.1    1.5  1  PF00575.18 S1 RNA binding domain
    2.6e-10   39.6   0.5    6.6e-10   38.3   0.2    1.8  2  PF00013.24 KH domain
    0.00011   21.6   0.3    0.00021   20.7   0.2    1.5  1  PF13014.1  KH domain
     0.0098   15.3   0.0      0.025   14.0   0.0    1.7  1  PF13083.1  KH domain
  ------ inclusion threshold ------
       0.13   12.0   0.2        0.4   10.5   0.0    1.9  2  PF03725.10 3' exoribonuclease family, domain 2


Domain annotation for each model (and alignments):
>> PF00575.18  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.1   5.6e-14   1.5e-10       9      64 ..     151     209 ..     142     217 .. 0.87

  Alignments for each domain:
  == domain 1    score: 40.8 bits;  conditional E-value: 5.6e-14
                 E--EEEEETTEEEEE--....--EEEEEGGGS-CCEEEECCCCEETT----EEEEE-EE CS
  PF00575.18   9 kGtVtsvtkgGafVdlg...ngvegfipiseissdrvedpeevlkvgdevevkvlkvdk 64 
                 k +V+sv ++G+fV lg    g eg+++ise++ +r+++++  +k g++++vk l++ +
  MMETSP1325-20131115|6453_1 151 KCEVVSVKNFGVFVSLGdefPGLEGLVHISELHTERIRNINGFVKEGQRIDVKCLGMAD 209
                 679**************9999********************************888755 PP

>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.8   7.7e+03      42      56 ..      21      36 ..      21      37 .. 0.74
   2 !   38.3   0.2   2.4e-13   6.6e-10       2      56 ..      68     123 ..      67     125 .. 0.95

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 2.8
                EEEEE.SHHHHHHHHH CS
  PF00013.24 42 vtisG.dpesvekAkk 56
                ++++G + +  e+A++
  MMETSP1325-20131115|6453_1 21 IKCEGlSIDTLERALE 36
                5678888888888876 PP

  == domain 2    score: 38.3 bits;  conditional E-value: 2.4e-13
                 CEEEEECCCCHHH---TTHHHHHHHHHHT-E.EEE--SE.EEEEEE.SHHHHHHHHH CS
  PF00013.24   2 arvkvpnskigriIGkgGsnIkeIeeetgak.IdvpkdrdtvtisG.dpesvekAkk 56 
                 +++ vp + ig++IG+gG++I++I e+   +  dv++++  v isG ++ + e+Ak+
  MMETSP1325-20131115|6453_1  68 ITLNVPVNSIGKVIGPGGKTIRAIIEDHELQgLDVSEEG-AVAISGfNTTKMEQAKA 123
                 6799*******************************9989.***************97 PP

>> PF13014.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.2   7.6e-08   0.00021       2      20 ..      77      95 ..      76     112 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 7.6e-08
   PF13014.1  2 vgliIGkgGetIkeIreet 20
                +g++IG+gG+tI+ I e++
  MMETSP1325-20131115|6453_1 77 IGKVIGPGGKTIRAIIEDH 95
                89***************98 PP

>> PF13083.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   9.2e-06     0.025      30      54 ..      67      91 ..      59      92 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 9.2e-06
   PF13083.1 30 tinlnvdgedlGrlIGkrGktldAL 54
                 i+lnv  + +G++IG  Gkt++A+
  MMETSP1325-20131115|6453_1 67 MITLNVPVNSIGKVIGPGGKTIRAI 91
                688999999***************8 PP

>> PF03725.10  3' exoribonuclease family, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00015       0.4      29      66 ..       1      39 [.       1      41 [. 0.94
   2 ?   -1.9   0.0       1.1   2.9e+03      46      65 ..     207     226 ..     198     228 .] 0.69

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00015
                EEEEEEEETTSEEEEEEEE-S-...BEHHHHHHHHHHHH CS
  PF03725.10 29 sdldlavagtkdvvtlmqeggsq.eideeslleaielAk 66
                +++d++vag+  ++   q++ +  +++ ++l++a+e A+
  MMETSP1325-20131115|6453_1  1 GTMDFKVAGDATGISTFQLDIKCeGLSIDTLERALEQAR 39
                689*******************99************996 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 1.1
                 EE-S-..BEHHHHHHHHHHH CS
  PF03725.10  46 qeggsqeideeslleaielA 65 
                  ++g+ +++++ ++ea   A
  MMETSP1325-20131115|6453_1 207 MADGKLKLSRKAVFEAASAA 226
                 45666679999999997666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 1162.49
//
Query:       MMETSP1325-20131115|6449_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.6   0.0       0.15   12.1   0.0    1.5  1  PF10615.4 Protein of unknown function (DUF2470)


Domain annotation for each model (and alignments):
>> PF10615.4  Protein of unknown function (DUF2470)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.1e-05      0.15      40      82 ..      53      99 ..      11     100 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.1e-05
   PF10615.4 40 sarmtdidleglelev....gdkktlrvpFepplessedvrqrlvam 82
                s +m+d++++g+ l+      +  ++++ F++ ++++ed  q++ a+
  MMETSP1325-20131115|6449_1 53 SIEMRDLTPHGFWLTGqlegAGAISTQISFQKSCSNPEDFQQQIMAL 99
                679*********9998887557799******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       438  (0.0320363); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 502.46
//
Query:       MMETSP1325-20131115|6451_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 1990.02
//
Query:       MMETSP1325-20131115|6459_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.099   12.4   0.0       0.11   12.3   0.0    1.1  1  PF04003.7 Dip2/Utp12 Family


Domain annotation for each model (and alignments):
>> PF04003.7  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.8e-06      0.11      11      41 ..      19      49 ..      16      58 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 7.8e-06
   PF04003.7 11 ekippsdiedtlasLpfsyvpklLkfLaell 41
                ek   ++++++l++Lp+s + ++L+ L+ l 
  MMETSP1325-20131115|6459_1 19 EKPHRRHLKQALSQLPPSRISRVLSHLSPLA 49
                6667799********************9843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|6458_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-27   96.2   0.0    1.9e-27   95.9   0.0    1.0  1  PF00069.20 Protein kinase domain
      5e-06   25.7   0.0    6.1e-06   25.4   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.9   0.0   2.8e-31   1.9e-27     150     260 .]       6     111 ..       2     111 .. 0.97

  Alignments for each domain:
  == domain 1    score: 95.9 bits;  conditional E-value: 2.8e-31
                 EESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 150 ksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                  ++e+++++vgt++Y+APEvl   k+ytk++D+Ws+Gvi+y ll+g +pf g+   ++ ++++ki+ ++ +++e+++s  s+++k++i++ll  + ++R+ta+++l hpwl
  MMETSP1325-20131115|6458_1   6 DDEEHMSSRVGTPYYIAPEVLS--KQYTKACDIWSIGVICYILLCGYPPFFGD---NDTQIFRKIMAGSFSYPEREWSGISDSAKEFISSLLVVNYNQRPTATQALAHPWL 111
                 56799****************9..9****************************...******************************************************6 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0     9e-10   6.1e-06     164     254 ..      13     104 ..       2     108 .. 0.77

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 9e-10
                 T-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-B...S---TTSBHHHHHHHHHHT-SSGGGS--HHH CS
  PF07714.12 164 eaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkr...lekpekcpeelyelmkqCweeepeeRptfke 254
                 ++     ++apE+l+ k++t++ D+Ws Gv+++ +++ g  p+ g +++++++++ +g      ++ + ++++ +e++++ +  + ++Rpt ++
  MMETSP1325-20131115|6458_1  13 SRVGTPYYIAPEVLS-KQYTKACDIWSIGVICYILLC-GYPPFFGDNDTQIFRKIMAGSFsypEREWSGISDSAKEFISSLLVVNYNQRPTATQ 104
                 444555689***987.57***************8888.99**************9776541103444567899999999999999999999776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 714.02
//
Query:       MMETSP1325-20131115|6460_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.1e-08   31.2   0.0      0.018   14.9   0.0    4.3  4  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       0.1   1.4e+03      14      24 .]      32      42 ..      30      42 .. 0.85
   2 !   14.9   0.0   1.3e-06     0.018       1      24 []      44      68 ..      44      68 .. 0.96
   3 !    3.8   0.0    0.0052        71       7      24 .]      76      93 ..      70      93 .. 0.85
   4 !    6.6   0.0   0.00062       8.5       5      22 ..      99     116 ..      95     127 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.1
   PF13516.1 14 igdeGlsaLan 24
                i+d G+  La+
  MMETSP1325-20131115|6460_1 32 ITDAGALLLAQ 42
                99***998886 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 1.3e-06
   PF13516.1  1 lknLtsL.dLsnNqigdeGlsaLan 24
                ++nLt+L +L+++q++d+G+  Lan
  MMETSP1325-20131115|6460_1 44 CPNLTVLpQLQYTQVTDIGVIVLAN 68
                9*******************99986 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.0052
   PF13516.1  7 LdLsnNqigdeGlsaLan 24
                +dLs + ++d  +  Lan
  MMETSP1325-20131115|6460_1 76 IDLSWTRVTDASAIVLAN 93
                79********99988876 PP

  == domain 4    score: 6.6 bits;  conditional E-value: 0.00062
   PF13516.1   5 tsLdLsnNqigdeGlsaL 22 
                 +  +Ls++ ++d G+  +
  MMETSP1325-20131115|6460_1  99 KFVNLSFTRVTDAGAIEI 116
                 5679**********9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 700.47
//
Query:       MMETSP1325-20131115|6461_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.047   13.7   0.0      0.063   13.3   0.0    1.2  1  PF00403.21 Heavy-metal-associated domain


Domain annotation for each model (and alignments):
>> PF00403.21  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.6e-06     0.063       1      23 [.      32      54 ..      32      57 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.6e-06
  PF00403.21  1 tvrvpgmhCagCaakvekalsel 23
                t+ v+ ++C++Ca k+ +++++l
  MMETSP1325-20131115|6461_1 32 TLHVVALTCENCALKAFTSILAL 54
                68899***********9999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|6463_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|6462_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 214.67
//
Query:       MMETSP1325-20131115|6464_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 523.29
//
Query:       MMETSP1325-20131115|6466_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 632.23
//
Query:       MMETSP1325-20131115|6455_1  [L=594]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-16   59.1   0.0    9.7e-13   47.7   0.0    2.2  2  PF00071.17 Ras family
    4.6e-08   32.8   0.0      1e-07   31.6   0.0    1.7  1  PF01471.13 Putative peptidoglycan binding domain
    0.00032   21.0   0.0     0.0023   18.3   0.0    2.1  1  PF08477.8  Miro-like protein


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00014      0.63       2      27 ..     338     363 ..     337     368 .. 0.93
   2 !   47.7   0.0   2.1e-16   9.7e-13      67     148 ..     436     525 ..     416     538 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00014
                 EEEE-------HHHHHHHHHSSS-SS CS
  PF00071.17   2 lvlvGdsavGKtslllrfvedkFkee 27 
                 +v++G ++vG tsl+  f+  kF+e+
  MMETSP1325-20131115|6455_1 338 IVVIGGRQVGLTSLTDVFTGRKFPEK 363
                 89*********************997 PP

  == domain 2    score: 47.7 bits;  conditional E-value: 2.1e-16
                 HHHHT-SEEEEE--TT....-HHHHHTHHHHHHHHHHHST....TTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTT CS
  PF00071.17  67 lyyrdaegillvydit....sresfenvkkwveeikrvae....envpivLvGnKvDleekravsteegeelakelglkfletSAktnen 148
                 ly  +++++l+++d+t    s +s++  +++++e+ +  +    + +pi+LvG+K+D +e+r vs+ee+ ++a++ gl+++e+SAk+  +
  MMETSP1325-20131115|6455_1 436 LYSGNSTAVLICFDLTapadSPSSLTATDHFLREVLEARSpadgNPLPIILVGTKADDAEHRSVSEEEAADFARQRGLQYCEVSAKSGLH 525
                 6778899*******9833335689************9999999999****************************************9765 PP

>> PF01471.13  Putative peptidoglycan binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   2.3e-11     1e-07       2      57 .]     138     204 ..     137     204 .. 0.89

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 2.3e-11
                 --HHHHHHHHT..----.-----...-----HHHHHHHHHH.HH----..--....--B--HHHHHH CS
  PF01471.13   2 gedveelqryLsrlGyl.sgtad...gtfgpateeAvkefQ.rffgLp..vt....GildpaTlaal 57 
                 g+dv +lq+ L +lGyl ++++d   g+fgp t++Av  +Q r+  L   +t    G+++ +T++al
  MMETSP1325-20131115|6455_1 138 GDDVDALQEVLIQLGYLdPSAVDkwrGHFGPRTRDAVVNYQfRRVHLHdrATtdpiGEVGIETWEAL 204
                 89***************866777888***************98888876666789999999999997 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0     5e-07    0.0023       2     119 .]     338     492 ..     337     492 .. 0.70

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 5e-07
   PF08477.8   2 vvvvGdkgvGKssllsqlvgeefp...........................kkklpeeikgdtlavktlevdvdtel...........................lelwdlggr.eelkkehelllkkadaillvydlt....deesleevsellawlaelrklgkk..ipvilvgnklD 119
                 +vv+G  +vG +sl   ++g++fp                                                    +                           ++++d   +  +  ++ +l + +++a+l+ +dlt    +++sl   + +l +  e+r+ +    +p+ilvg+k D
  MMETSP1325-20131115|6455_1 338 IVVIGGRQVGLTSLTDVFTGRKFPekpskqelrlrscylhlkptkalahhhG------------------------SsaaaaataaettvealdgygqggvlvkVQVRDKRASaTRTPFSWKLYSGNSTAVLICFDLTapadSPSSLTATDHFLREVLEARSPADGnpLPIILVGTKAD 492
                 89**********************8888777777777776554444433331........................022222222222333344445666676666666544436677887888************984333578**********9999987654438*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.95u 0.34s 00:00:01.29 Elapsed: 00:00:00.66
# Mc/sec: 2156.72
//
Query:       MMETSP1325-20131115|6471_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6472_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|6469_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.057   13.3   2.0        2.9    7.8   0.0    2.5  2  PF09702.5  CRISPR-associated protein (Cas_Csa5)
      0.062   12.2   0.0        0.1   11.5   0.0    1.3  1  PF11675.3  Protein of unknown function (DUF3271)
      0.093   12.2   1.7       0.19   11.2   0.6    2.1  2  PF02734.12 DAK2 domain
       0.17   11.3   2.9       0.11   11.9   0.1    2.1  2  PF04156.9  IncA protein
          2    8.2   7.1       0.39   10.5   0.5    2.5  3  PF00640.18 Phosphotyrosine interaction domain (PTB/PID)


Domain annotation for each model (and alignments):
>> PF09702.5  CRISPR-associated protein (Cas_Csa5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.2    0.0096        26       6      45 ..      36      75 ..      17     106 .. 0.81
   2 ?    7.8   0.0    0.0011       2.9      17      80 ..     174     236 ..     157     242 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0096
   PF09702.5  6 esptyvDRianALskEavekvlyeaqRivrsgiesgeike 45
                e+ t +D + nA  k   +  + +++ +++ +i++  ++e
  MMETSP1325-20131115|6469_1 36 EQKTKIDIFENAFRKIKEATGVSDVNEVIQKIISQEGTTE 75
                77899**********999999**********998766655 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0011
   PF09702.5  17 ALskEavekvlyeaqRivrsgiesgeikeqtveegrkYiavkvkekegnyivvgklpsdedves 80 
                  L+ E+v+ vl+e +++v s +++ +  + + e+    +a+   e++ + + +g  ++ e+v++
  MMETSP1325-20131115|6469_1 174 ELTDETVVGVLLENEKVVLSLVNRMKAAK-AEEQALFDVALDDPEHDDEIMKLGATSTVEEVDE 236
                 489*********************99888.3334444566666778888888999999999875 PP

>> PF11675.3  Protein of unknown function (DUF3271)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.7e-05       0.1      12     117 ..      48     156 ..      43     167 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.7e-05
   PF11675.3  12 fsnvkaat.fqdannnnpksiayasvaqPtvtfekdekkhteyLdiindilrdesknikyayeggny.hwvitdfdisidnssrslkk.klskkkkealkkGssyfiaY 117
                 f  +k at   d n+ ++k i+ +  ++  + ++k+++ ++e L+  +  ++ + ++iky+  gg +   ++ d++ ++  s ++l++ +l+ ++  ++ +  +  i +
  MMETSP1325-20131115|6469_1  48 FRKIKEATgVSDVNEVIQKIISQEGTTENLMLLTKENQAKIEALNDTKGAMKARVEEIKYSGPGGGHrRKMVDDHEEQLTSSATRLERcRLKYERLAKMLISVKAGIKH 156
                 6678866537899***********************************************9887766156788888888888888876245555555555555555555 PP

>> PF02734.12  DAK2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.6   6.8e-05      0.19      72     129 ..      12      69 ..       1      90 [. 0.84
   2 ?   -1.9   0.0      0.76   2.1e+03      78      78 ..     159     159 ..     121     208 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.8e-05
  PF02734.12  72 daedlakaleaaleaikavGkakpgdkTmlDvlrpavealeaakdgedleealeaaak 129
                   e+l+ka++  + + ++v++ +  +kT +D+ + a +++++a+  +d++e++++++ 
  MMETSP1325-20131115|6469_1  12 GEETLKKAMAVNVMTSQRVTQERLEQKTKIDIFENAFRKIKEATGVSDVNEVIQKIIS 69 
                 557799************************************99999*****999876 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.76
  PF02734.12  78 k 78 
                 +
  MMETSP1325-20131115|6469_1 159 D 159
                 1 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   4.1e-05      0.11     120     183 ..      76     149 ..      27     157 .. 0.86
   2 ?   -1.1   0.2       0.4   1.1e+03     137     150 ..     280     293 ..     239     304 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.1e-05
   PF04156.9 120 llqeelksleerlesleesikelakeirelr..........eeisdlkeevqelrselerlqedlqrlqeklae 183
                 +l  + k+ ++++e+l++   ++ ++++e+           +++ d++e++    ++ler++  ++rl+++l +
  MMETSP1325-20131115|6469_1  76 NLMLLTKENQAKIEALNDTKGAMKARVEEIKysgpggghrrKMVDDHEEQLTSSATRLERCRLKYERLAKMLIS 149
                 3336678899999999999999999999999999************************************9866 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.4
   PF04156.9 137 esikelakeirelr 150
                 +++k+++++++ ++
  MMETSP1325-20131115|6469_1 280 DKVKKASQQLMSQQ 293
                 33333333333333 PP

>> PF00640.18  Phosphotyrosine interaction domain (PTB/PID)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.5   0.00014      0.39       5      91 ..      24     114 ..      21     125 .. 0.85
   2 ?    0.6   0.0      0.17   4.6e+02      17      69 ..     127     179 ..     118     193 .. 0.81
   3 ?   -1.7   0.2      0.87   2.4e+03      24      46 ..     276     298 ..     270     304 .. 0.56

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00014
                 EE-EEEESSSSSSSSTHHHHHHHHHHHHHHHH.....HSSS----CTTTT--EEEEEEECTTEEEEEESTTTSEEEEESCCCSSEEE--BTT CS
  PF00640.18   5 ylGsvevleerapdkstrmqvaqeaisrvkea.....klkkikkkegesqkgteidLeistdglklldektkevladhplrkIsfiadgdvd 91 
                  + s  v++e +++++t+ ++ ++a +++kea      ++ i+k  ++ ++  + +L  + ++ k+ + ++ +  ++ ++++I + + g  +
  MMETSP1325-20131115|6469_1  24 VMTSQRVTQE-RLEQKTKIDIFENAFRKIKEAtgvsdVNEVIQKIISQEGTTENLMLLTKENQAKIEALNDTKGAMKARVEEIKYSGPGGGH 114
                 5556678888.8999*******************99878888889999999999999999999999999999999**********9994443 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.17
                 SSSTHHHHHHHHHHHHHHHHHSSS----CTTTT--EEEEEEECTTEEEEEEST CS
  PF00640.18  17 pdkstrmqvaqeaisrvkeaklkkikkkegesqkgteidLeistdglklldek 69 
                  + +tr + ++ + +r++++ ++ +++ +  + k ++++ e+  ++++l+de 
  MMETSP1325-20131115|6469_1 127 TSSATRLERCRLKYERLAKMLISVKAGIKHLQDKLQPVVDEVGGRAIELTDET 179
                 56688999999999999999999999999999999999999999999888876 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 0.87
                 HHHHHHHHHHHHHHSSS----CT CS
  PF00640.18  24 qvaqeaisrvkeaklkkikkkeg 46 
                 +++++++++++++ +++ +kk+ 
  MMETSP1325-20131115|6469_1 276 ELTRDKVKKASQQLMSQQEKKKV 298
                 56777777777773333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1159  (0.0847718); expected 273.4 (0.02)
Passed bias filter:                      432  (0.0315974); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.42s 00:00:01.11 Elapsed: 00:00:00.53
# Mc/sec: 1379.04
//
Query:       MMETSP1325-20131115|6473_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-11   42.3   6.8    7.3e-11   42.1   4.7    1.0  1  PF13517.1  Family description
  ------ inclusion threshold ------
      0.027   14.0  17.1       0.14   11.8   2.4    2.4  2  PF01839.18 FG-GAP repeat
        0.3   10.3  11.0        2.1    7.7   1.3    2.3  2  PF13202.1  EF hand
       0.64    9.3   7.5        3.3    7.1   0.4    2.3  2  PF00036.27 EF hand
       0.89    9.5   3.4         15    5.6   0.1    2.4  2  PF13405.1  EF-hand domain
        3.5    7.3  17.5        8.9    6.0   3.2    3.0  3  PF00404.13 Dockerin type I repeat
        4.1    6.6   7.7        1.4    8.2   0.4    2.0  2  PF12256.3  Insecticide toxin TcdB middle/N-terminal region
        8.1    6.0   9.8        9.4    5.8   0.9    2.1  2  PF05279.6  Aspartyl beta-hydroxylase N-terminal region


Domain annotation for each model (and alignments):
>> PF13517.1  Family description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   4.7   4.3e-14   7.3e-11       1      60 [.       3      64 ..       3      65 .. 0.84

  Alignments for each domain:
  == domain 1    score: 42.1 bits;  conditional E-value: 4.3e-14
   PF13517.1  1 DldgDGdlDlvvagdgglrlylnngdGt..ftdvaetslgaggggtgvafgDldgDGdlDll 60
                D+dgDGd D++ a++g  ++ +++ dG    +++++t  ++ + ++ v + D+dgDGd D+l
  MMETSP1325-20131115|6473_1  3 DVDGDGDVDVLSASYGDDTIAWYESDGAspPSFTTRTITTSADFARCVFAIDVDGDGDVDVL 64
                9************8877777777777753377888888888899999*************97 PP

>> PF01839.18  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.4   8.1e-05      0.14       9      29 ..       3      20 ..       1      31 [. 0.79
   2 ?    8.9   3.6   0.00063       1.1       8      19 ..      52      64 ..      46      68 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 8.1e-05
                -TT---S-EEEEETEECTCE.- CS
  PF01839.18  9 DfnGDGrpDlavGpmggghn.G 29
                D++GDG+ D++      +++ +
  MMETSP1325-20131115|6473_1  3 DVDGDGDVDVLS----ASYGdD 20
                ***********9....666544 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00063
                E.-TT---S-EEE CS
  PF01839.18  8 g.DfnGDGrpDla 19
                + D++GDG+ D++
  MMETSP1325-20131115|6473_1 52 AiDVDGDGDVDVL 64
                44*********98 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.3    0.0012       2.1       7      17 ..       1      11 [.       1      12 [. 0.89
   2 ?    7.7   1.3    0.0012       2.1       7      17 ..      52      62 ..      52      63 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0012
                HH--S----B- CS
   PF13202.1  7 afDlNgDGkIs 17
                a+D++gDG ++
  MMETSP1325-20131115|6473_1  1 AIDVDGDGDVD 11
                79******987 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0012
                HH--S----B- CS
   PF13202.1  7 afDlNgDGkIs 17
                a+D++gDG ++
  MMETSP1325-20131115|6473_1 52 AIDVDGDGDVD 62
                79******987 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.9    0.0049       8.4       9      18 ..       2      11 ..       1      12 [. 0.87
   2 ?    7.1   0.4    0.0019       3.3       9      18 ..      53      62 ..      45      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0049
                HCTTTSSEBE CS
  PF00036.27  9 fDkDgdGkIs 18
                +D+DgdG ++
  MMETSP1325-20131115|6473_1  2 IDVDGDGDVD 11
                7******998 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0019
                HCTTTSSEBE CS
  PF00036.27  9 fDkDgdGkIs 18
                +D+DgdG ++
  MMETSP1325-20131115|6473_1 53 IDVDGDGDVD 62
                8******998 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.2     0.019        33       9      18 ..       2      11 ..       1      14 [. 0.85
   2 ?    5.6   0.1    0.0088        15       8      18 ..      52      62 ..      45      65 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.019
                C-------B- CS
   PF13405.1  9 fDkdgdGkid 18
                +D dgdG +d
  MMETSP1325-20131115|6473_1  2 IDVDGDGDVD 11
                8******988 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0088
                CC-------B- CS
   PF13405.1  8 lfDkdgdGkid 18
                ++D dgdG +d
  MMETSP1325-20131115|6473_1 52 AIDVDGDGDVD 62
                79******988 PP

>> PF00404.13  Dockerin type I repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   3.2    0.0052       8.9       1      10 [.       3      12 ..       3      13 .. 0.91
   2 ?   -0.6   0.0      0.66   1.1e+03       9      15 ..      42      48 ..      41      49 .. 0.83
   3 ?    6.0   3.2    0.0052       8.9       1      10 [.      54      63 ..      54      64 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0052
                -TT-SS--SH CS
  PF00404.13  1 DVNgDGkVna 10
                DV+gDG V+ 
  MMETSP1325-20131115|6473_1  3 DVDGDGDVDV 12
                9*******96 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.66
                SHHHHHH CS
  PF00404.13  9 nalDlal 15
                ++ D+a+
  MMETSP1325-20131115|6473_1 42 TSADFAR 48
                799**97 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.0052
                -TT-SS--SH CS
  PF00404.13  1 DVNgDGkVna 10
                DV+gDG V+ 
  MMETSP1325-20131115|6473_1 54 DVDGDGDVDV 63
                9*******96 PP

>> PF12256.3  Insecticide toxin TcdB middle/N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   1.2     0.033        57      30      46 ..       2      18 ..       1      34 [. 0.76
   2 ?    8.2   0.4    0.0008       1.4      19      42 ..      41      65 ..      25      69 .] 0.75

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.033
   PF12256.3 30 aDinGdGladlvlsvph 46
                +D++GdG +d++  +++
  MMETSP1325-20131115|6473_1  2 IDVDGDGDVDVLSASYG 18
                8*********9985554 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0008
   PF12256.3 19 gvryd.tcqlslaDinGdGladlvl 42
                +++ d ++ + ++D++GdG +d++ 
  MMETSP1325-20131115|6473_1 41 TTSADfARCVFAIDVDGDGDVDVLS 65
                4556667889*********999875 PP

>> PF05279.6  Aspartyl beta-hydroxylase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   1.2    0.0086        15      49      59 ..       3      13 ..       1      17 [. 0.85
   2 ?    5.8   0.9    0.0055       9.4      49      59 ..      54      64 ..      49      67 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0086
   PF05279.6 49 DaDGDGDFDVd 59
                D DGDGD DV 
  MMETSP1325-20131115|6473_1  3 DVDGDGDVDVL 13
                99*******96 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0055
   PF05279.6 49 DaDGDGDFDVd 59
                D DGDGD DV 
  MMETSP1325-20131115|6473_1 54 DVDGDGDVDVL 64
                99*******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.61
# Mc/sec: 271.06
//
Query:       MMETSP1325-20131115|6470_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-11   42.5   0.0    8.4e-11   41.4   0.0    1.4  2  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   6.2e-15   8.4e-11     225     293 ..      12      85 ..       4      92 .. 0.79
   2 ?   -2.3   0.0      0.13   1.7e+03     295     315 ..     114     133 ..     112     134 .. 0.82

  Alignments for each domain:
  == domain 1    score: 41.4 bits;  conditional E-value: 6.2e-15
                 HHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--......-TT....S--EEEGGGTEEEE---S CS
  PF00632.20 225 ienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrks.....eded....rLPtasTCfnyLkLpdYs 293
                    +we+++ + p+++rl+L+F+TG  +lP++G + +    ti+        ed+       P ++TC n L+Lp+Y 
  MMETSP1325-20131115|6470_1  12 QDAFWEVVDGLCPADKRLLLLFITGIAKLPAKGTEFM----TIEMPFlplglEDQRkilhMVPQSHTCDNILELPNYY 85 
                 568******************************9855....444433446653333223369**************95 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHHHHT.----- CS
  PF00632.20 295 keilkekLltAieegqegFel 315
                 + +l++k+++A e++  g++l
  MMETSP1325-20131115|6470_1 114 RHVLRRKIQIACENA-LGYGL 133
                 67899******9998.66766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 672.82
//
Query:       MMETSP1325-20131115|6474_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.033   13.2   6.2      0.034   13.2   0.8    2.2  2  PF12111.3 Polyribonucleotide phosphorylase C terminal


Domain annotation for each model (and alignments):
>> PF12111.3  Polyribonucleotide phosphorylase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2     0.004        54      17      28 ..       3      14 ..       2      22 .. 0.74
   2 ?   13.2   0.8   2.5e-06     0.034       6      34 ..      30      61 ..      26      65 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.004
   PF12111.3 17 GKGsAGghSAvs 28
                G Gs+Gg+ A  
  MMETSP1325-20131115|6474_1  3 GAGSGGGSFARP 14
                88*****97765 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 2.5e-06
   PF12111.3  6 seWqrprYyF...eGKGsAGghSAvshatapp 34
                +eW r++  F   +G Gs+Gg+ A   ++++ 
  MMETSP1325-20131115|6474_1 30 VEWRRSTSSFmeaDGAGSGGGSFAKPRVSTES 61
                89********8778********9998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|6476_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       503  (0.0367905); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 732.73
//
Query:       MMETSP1325-20131115|6477_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 691.26
//
Query:       MMETSP1325-20131115|6475_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.23   11.2  33.9       0.34   10.6  23.5    1.3  1  PF03153.8 Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6  23.5   2.5e-05      0.34      62     306 ..      75     332 ..      19     344 .. 0.42

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 2.5e-05
                 X..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXX....XXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXX............XXXX.XXXXXXXXXXXXXXXXXXX..........XXXXXXXXXXXXXXXX....XXXXXXXX.XXXXXX---------------------- CS
   PF03153.8  62 l.qqslqp.qaslavtaaaasqentpsssssaassaaaslpagvpaestiktepgqllkvevpvmvtqnsanselqqpaqqraaqqlqqslgapassqas.....slqqqpaplksneesqeqqqpgkeiqqqqtdgasdde....kasvarrreaaasqeaeldellksqleqr.ikeleagklskalkqkkkqkksekkskieiQvDGagddssdesee....deeadede.eekdkvieeDlddseDDvseedeedldd 306
                   ++s+++ ++s  + +++ s ++  s ss++++ + +s + ++p+ s+  t++g+l++ ++ + ++++ +   + q++ q      ++++g+++ss +s     sl+q+++ ++s++     q+ ++ ++     + s+de            e+   + +   + + +++  + ++++ +++   a +    ++k++ +++ + Q D +++ ++++ +     d e d+d  ++ d++ e+D   ++D++se+d   + +
  MMETSP1325-20131115|6475_1  75 DgPPSPASsTTSSSSGSSRRSASSRSSASSASSTDSSSSSRSQTPSTSRRSTASGTLSQSQSVTRSSMPESSAAQSQSQSQS-EAPSSARSGTSSSSASSsgsnqSLSQASTTVPSRSRAGSAQLGESGTTTATALSRSNDEtkgtF---NDMSEISRGEGSVAPSKISAETPFSaAEAKPSRGVDAAAEDVGADAKTAADAEERTQGDYTDGAETKDTQAtwrsDSESDSDSdSDSDSESESDSESESDSESESDSGTESE 332
                 2322222212222222222222222222222323333333333677788899999988888666665554444433333333.3333333333333333334455667777777663333333333333333333333333221110...1111111111112222222222222022222222222222222222333333333443333333333222223232222222222333334444444444444444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1117  (0.0816998); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                       132  (0.00965477); expected 13.7 (0.001)
Passed Fwd filter:                        71  (0.0051931); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 3.00u 0.48s 00:00:03.48 Elapsed: 00:00:01.35
# Mc/sec: 678.08
//
Query:       MMETSP1325-20131115|6480_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   13.9   0.5      0.029   13.9   0.3    2.7  3  PF07945.6  Janus-atracotoxin
       0.47    9.5   5.3         13    4.9   3.6    2.5  1  PF00649.13 Copper fist DNA binding domain


Domain annotation for each model (and alignments):
>> PF07945.6  Janus-atracotoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1      0.69   4.7e+03      13      16 ..      10      13 ..       6      16 .. 0.53
   2 ?   13.9   0.3   4.2e-06     0.029      12      25 ..      24      37 ..      22      43 .. 0.89
   3 ?   -0.0   1.6     0.095   6.5e+02      16      24 ..      62      70 ..      54      80 .. 0.75

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.69
   PF07945.6 13 CCPC 16
                C  C
  MMETSP1325-20131115|6480_1 10 CSKC 13
                3333 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 4.2e-06
   PF07945.6 12 ACCPCCPGtsCkap 25
                AC PC PG  C+ p
  MMETSP1325-20131115|6480_1 24 ACYPCVPGMDCREP 37
                9**********987 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 0.095
   PF07945.6 16 CCPGtsCka 24
                 CP   C++
  MMETSP1325-20131115|6480_1 62 SCPNNNCEG 70
                699999998 PP

>> PF00649.13  Copper fist DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   3.6    0.0019        13      11      18 ..      10      17 ..       9      48 .. 0.93

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0019
  PF00649.13 11 CeaCiRGH 18
                C++C++GH
  MMETSP1325-20131115|6480_1 10 CSKCVKGH 17
                ******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|6478_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-15   56.2   0.0    4.7e-15   55.2   0.0    1.4  1  PF00867.13 XPG I-region
    1.1e-05   25.4   0.0    2.8e-05   24.1   0.0    1.6  1  PF01367.15 5'-3' exonuclease, C-terminal SAM fold
  ------ inclusion threshold ------
      0.062   13.0   0.0       0.19   11.5   0.0    1.8  2  PF12826.2  Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> PF00867.13  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.0     1e-18   4.7e-15       4      94 .]     135     215 ..     133     215 .. 0.90

  Alignments for each domain:
  == domain 1    score: 55.2 bits;  conditional E-value: 1e-18
                 ---EEE-SS-HHHHHHHHHH----SEEE-SSTHHHH----EEEESCC--STTTT--SS-SCEEEEEHHHHHHHCTS-HHHHHHHHHH---T CS
  PF00867.13   4 gipyvvApgEAeaqcayLarsglvdavlseDsDlllfgapkvirnlskkkskkkkkkkekkvevidlekvleelgltreqfidlaillGcD 94 
                 g  + vA  ++e  ++ Lar g+vdavl++D+D+l+fg+p+++ ++   k          +++ i+l+  le l+l++ qf+dla+l+G+D
  MMETSP1325-20131115|6478_1 135 GWNVQVAAHDGEELASRLARDGVVDAVLTDDTDVLAFGSPVTYARVG--K-L-------RQLHRITLSTALEALQLSHAQFVDLAVLMGSD 215
                 6677899************************************9995..2.2.......347789999*********************98 PP

>> PF01367.15  5'-3' exonuclease, C-terminal SAM fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   6.1e-09   2.8e-05       4      50 ..     203     248 ..     200     259 .. 0.84

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 6.1e-09
  PF01367.15   4 eqiidlkaLvGDsSD.nipGvkgiGektAakLLkeygslenilenldk 50 
                  q++dl+ L+G  SD   +  +g+G ktA kL++e+gs++++ ++l  
  MMETSP1325-20131115|6478_1 203 AQFVDLAVLMG--SDyTASTLPGVGVKTAYKLIREHGSIDEVCAALPP 248
                 79*********..5624567999******************9987755 PP

>> PF12826.2  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.3   5.9e+03      12      21 ..     145     154 ..     143     155 .. 0.83
   2 ?   11.5   0.0   4.2e-05      0.19       8      32 ..     221     245 ..     217     248 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.3
   PF12826.2  12 GektAklLak 21 
                 Ge+ A +La+
  MMETSP1325-20131115|6478_1 145 GEELASRLAR 154
                 8999999997 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 4.2e-05
   PF12826.2   8 IrhVGektAklLakhFgsldaLaea 32 
                 ++ VG ktA +L ++ gs+d++ +a
  MMETSP1325-20131115|6478_1 221 LPGVGVKTAYKLIREHGSIDEVCAA 245
                 589*****************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       486  (0.0355471); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.47
# Mc/sec: 1386.83
//
Query:       MMETSP1325-20131115|6483_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|6482_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 656.39
//
Query:       MMETSP1325-20131115|6479_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-08   34.4   0.3     0.0023   17.6   0.0    3.1  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.7e-07    0.0023      19      39 .]     139     159 ..     126     159 .. 0.88
   2 !   13.7   0.0   2.9e-06     0.039      12      38 ..     255     282 ..     246     283 .] 0.75

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.7e-07
                 EESSSTEEEEEETTSEEEEEE CS
  PF00400.27  19 fspdgpllasgSrDgtirlWd 39 
                 +  + +++++gS D++ir Wd
  MMETSP1325-20131115|6479_1 139 IQSNNSYVITGSTDKNIRFWD 159
                 555678**************9 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 2.9e-06
                 SSEEEEEEESS.STEEEEEETTSEEEEE CS
  PF00400.27  12 spVtcvafspd.gpllasgSrDgtirlW 38 
                 ++V +++      ++++s+SrDg +++W
  MMETSP1325-20131115|6479_1 255 DAVLDLKSVGLpTKMMLSSSRDGVVKVW 282
                 4444444444467999************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.33s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 1474.28
//
Query:       MMETSP1325-20131115|6484_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-18   65.0   0.2    9.3e-18   63.4   0.1    1.8  2  PF00355.21 Rieske [2Fe-2S] domain
    4.5e-11   42.6   0.1    7.1e-11   42.0   0.1    1.2  1  PF02921.9  Ubiquinol cytochrome reductase transmembrane region


Domain annotation for each model (and alignments):
>> PF00355.21  Rieske [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0     0.074   5.1e+02       8      40 ..      72     103 ..      67     105 .. 0.80
   2 !   63.4   0.1   1.4e-21   9.3e-18      17      95 ..     106     181 ..      90     184 .. 0.75

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.074
                 GGGSCCTCEEEEEEGGSEEEEEECTCC-EEEEE CS
  PF00355.21   8 eeeipepgdgkttklgedlvvvrdkdgeivaln 40 
                  +ei e g++ t+k  +++v+++    e+ a++
  MMETSP1325-20131115|6484_1  72 LDEIGE-GQTITVKWRGKPVFIKRRTPEMIATE 103
                 577888.99999999888999988888888876 PP

  == domain 2    score: 63.4 bits;  conditional E-value: 1.4e-21
                 EEEEEG.GSEEEEEECTCC-EEEEESB-STSS-BTTECEBCSCTTCEEE-STTSSEEETT--EEEESTTCS-SCEEBEEE CS
  PF00355.21  17 gkttkl.gedlvvvrdkdgeivalnniCtHrgcplsegkaggekggvleCpcHgwaydlatgkvvkgpatkvlklypvke 95 
                 +   +l +++  +vr ++ e+ ++ +iCtH+gc++ +g     + g+++CpcHg++yd + g+++kgpa+ +l+ +p k 
  MMETSP1325-20131115|6484_1 106 VNIAELrDQETDAVRVQNPEWLVVMAICTHLGCVPISG---AGDYGGWFCPCHGSHYDGS-GRIRKGPAPLNLEVPPYKF 181
                 4444454444445566799*******************...455566***********99.*********5555555554 PP

>> PF02921.9  Ubiquinol cytochrome reductase transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   0.1     1e-14   7.1e-11      20      64 .]      17      61 ..      10      61 .. 0.92

  Alignments for each domain:
  == domain 1    score: 42.0 bits;  conditional E-value: 1e-14
                S-SHCCCCHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHCTS--HH CS
   PF02921.9 20 sraretddkrraFaYlmvgaagvlsaaaAKstVqtfvssmSaSAD 64
                + ++ t  + r F+Yl+ g++++++a+a +  V +fvssmSaS D
  MMETSP1325-20131115|6484_1 17 RAFASTGAEGREFTYLLLGGTRFVYASAIRLGVIQFVSSMSASKD 61
                4677888999*********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 910.62
//
Query:       MMETSP1325-20131115|6486_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 680.78
//
Query:       MMETSP1325-20131115|6485_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-07   29.3   4.8    5.7e-07   29.1   3.3    1.1  1  PF00487.19 Fatty acid desaturase
  ------ inclusion threshold ------
      0.092   12.7   0.1       0.25   11.3   0.0    1.6  2  PF12912.2  NLPC_P60 stabilising domain, N term


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   3.3   8.3e-11   5.7e-07     206     254 ..      25      74 ..       3      77 .. 0.76

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 8.3e-11
  PF00487.19 206 egswvlnllsgnln.yHieHHlfPgvpwyrLpelhprlreelkehgvryn 254
                 ++++ +++++++++ +H++HHlf ++p y+ +e+ ++l+++l+  g++ +
  MMETSP1325-20131115|6485_1  25 RPYHGFDWMHHHIGsTHVTHHLFSNLPCYHAQEATAALKAYLEPRGLYNF 74 
                 356689*************************************9998755 PP

>> PF12912.2  NLPC_P60 stabilising domain, N term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.7e-05      0.25      81     114 ..      52      86 ..      48      92 .. 0.88
   2 ?   -1.8   0.0      0.42   2.9e+03       9      26 ..      99     116 ..      98     120 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 3.7e-05
   PF12912.2  81 svkkkdvfwsfskykkkkg.Ygenlqpipqswfda 114
                  + ++++++++++y + +g Y ++ qp+p + ++ 
  MMETSP1325-20131115|6485_1  52 CYHAQEATAALKAYLEPRGlYNFDGQPWPLAAWKI 86 
                 57899*************************99975 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.42
   PF12912.2   9 lllaaCstkevkekpkkq 26 
                 ++++ C +k+ ke+++++
  MMETSP1325-20131115|6485_1  99 VCFWRCLSKDRKERAAER 116
                 578899999988887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 536.96
//
Query:       MMETSP1325-20131115|6487_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|6488_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|6489_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       575  (0.0420568); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|6491_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|6492_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|6494_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.042   13.9   0.1      0.066   13.2   0.0    1.3  1  PF08227.6 DASH complex subunit Hsk3 like


Domain annotation for each model (and alignments):
>> PF08227.6  DASH complex subunit Hsk3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   4.9e-06     0.066      10      30 ..      83     103 ..      81     112 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.9e-06
   PF08227.6  10 qLaqLqaNLadteelLettsi 30 
                 +L +L+ NLa  +e++ ++s 
  MMETSP1325-20131115|6494_1  83 ELGKLNENLAAIAEQIAVMST 103
                 899****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 594.10
//
Query:       MMETSP1325-20131115|6495_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.6   0.2        1.4    8.8   0.1    2.2  2  PF10135.4 Rod binding protein


Domain annotation for each model (and alignments):
>> PF10135.4  Rod binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.022     3e+02      15      30 ..      13      28 ..       9      30 .. 0.81
   2 ?    8.8   0.1    0.0001       1.4      26      47 ..      33      52 ..      33      53 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.022
   PF10135.4 15 ggfgedmfrdMldqql 30
                ++++e ++ +++  ql
  MMETSP1325-20131115|6495_1 13 KSSAEAWYSSLMLPQL 28
                567*******997776 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0001
   PF10135.4 26 ldqqlAkqlaksgGiGLAdaly 47
                +dq+  +++ak+  iGLA++l+
  MMETSP1325-20131115|6495_1 33 FDQEAVDKIAKQ--IGLAKLLV 52
                699*******96..*****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 379.80
//
Query:       MMETSP1325-20131115|6496_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-05   22.3  25.9    0.00028   20.8   5.4    3.5  4  PF07974.8  EGF-like domain
     0.0071   16.1  19.4      0.094   12.5   0.6    3.8  4  PF00008.22 EGF-like domain
  ------ inclusion threshold ------
      0.046   13.7   4.1      0.046   13.7   2.8    3.5  4  PF12661.2  Human growth factor-like EGF
       0.77    9.6  18.9       0.17   11.7   0.7    2.9  3  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   1.4   0.00011      0.38      20      32 .]       4      16 ..       2      16 .. 0.95
   2 ?   -3.1   0.0       2.4     8e+03      23      27 ..      21      27 ..      20      28 .. 0.64
   3 !   20.8   5.4   8.1e-08   0.00028       5      32 .]      40      70 ..      37      70 .. 0.90
   4 ?    2.7   0.2     0.038   1.3e+02       7      15 ..      83      92 ..      75      96 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00011
   PF07974.8 20 kCvCdsgyqGktC 32
                +C C++gy+G+ C
  MMETSP1325-20131115|6496_1  4 ICNCTQGYTGPAC 16
                6************ PP

  == domain 2    score: -3.1 bits;  conditional E-value: 2.4
   PF07974.8 23 Cdsg..y 27
                C++g  +
  MMETSP1325-20131115|6496_1 21 CPKGkaW 27
                8877665 PP

  == domain 3    score: 20.8 bits;  conditional E-value: 8.1e-08
   PF07974.8  5 gliCgghGtCvkqcgkCvCdsg...yqGktC 32
                g++C+++G+C ++ g+C+Cds    + G+ C
  MMETSP1325-20131115|6496_1 40 GSVCSNRGICSRSGGTCSCDSTysvFEGAAC 70
                568*******************999999999 PP

  == domain 4    score: 2.7 bits;  conditional E-value: 0.038
   PF07974.8  7 iCgg.hGtCv 15
                 Cg  +GtC 
  MMETSP1325-20131115|6496_1 83 ACGDtRGTCL 92
                49999****7 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.6   2.7e-05     0.094      19      31 ..       2      14 ..       1      15 [. 0.91
   2 ?   -0.1   0.0      0.24   8.3e+02      23      29 ..      20      29 ..      20      32 .. 0.74
   3 !   12.2   3.0   3.6e-05      0.12       5      29 ..      42      63 ..      37      71 .. 0.87
   4 ?   -1.1   0.1       0.5   1.7e+03       9      13 ..      88      92 ..      79      95 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.7e-05
                EEEEE--TTCTTT CS
  PF00008.22 19 gytCeCpeGytGk 31
                +++C C++GytG+
  MMETSP1325-20131115|6496_1  2 DFICNCTQGYTGP 14
                79**********6 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.24
                E--TT...CT CS
  PF00008.22 23 eCpeG...yt 29
                eCp+G   ++
  MMETSP1325-20131115|6496_1 20 ECPKGkawFD 29
                7****88554 PP

  == domain 3    score: 12.2 bits;  conditional E-value: 3.6e-05
                TCSS--EEEEECCTEEEEE--TTCT CS
  PF00008.22  5 pCsngGtCvdtpgggytCeCpeGyt 29
                 Csn+G+C +++    tC C + y+
  MMETSP1325-20131115|6496_1 42 VCSNRGICSRSG---GTCSCDSTYS 63
                7**********8...9****99864 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 0.5
                --EEE CS
  PF00008.22  9 gGtCv 13
                +GtC+
  MMETSP1325-20131115|6496_1 88 RGTCL 92
                46775 PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   2.8   1.3e-05     0.046       2      13 .]       5      16 ..       4      16 .. 0.95
   2 ?   -1.8   0.1       1.1   3.8e+03       3       7 ..      20      24 ..      20      24 .. 0.77
   3 ?    3.1   0.2     0.031   1.1e+02       1       9 [.      55      63 ..      55      63 .. 0.84
   4 ?   -2.0   0.0       1.3   4.4e+03       8      13 .]      65      70 ..      65      70 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.3e-05
   PF12661.2  2 CqCppGyTGdnC 13
                C C +GyTG+ C
  MMETSP1325-20131115|6496_1  5 CNCTQGYTGPAC 16
                **********99 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.1
   PF12661.2  3 qCppG 7 
                +Cp G
  MMETSP1325-20131115|6496_1 20 ECPKG 24
                6*977 PP

  == domain 3    score: 3.1 bits;  conditional E-value: 0.031
   PF12661.2  1 kCqCppGyT 9 
                +C C++ y+
  MMETSP1325-20131115|6496_1 55 TCSCDSTYS 63
                7***99885 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 1.3
   PF12661.2  8 yTGdnC 13
                ++G+ C
  MMETSP1325-20131115|6496_1 65 FEGAAC 70
                899999 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.7     5e-05      0.17      19      37 ..       4      24 ..       1      34 [. 0.81
   2 ?    4.0   5.8     0.012        41       3      32 ..      43      71 ..      37      84 .. 0.73
   3 ?   -1.4   1.0       0.6   2.1e+03      11      20 ..      82      91 ..      68      97 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5e-05
                -BSBSTTEE---S-..EE--- CS
  PF00053.19 19 qClCkenveGrkCd..rCkpg 37
                 C+C ++++G+ C+  +C +g
  MMETSP1325-20131115|6496_1  4 ICNCTQGYTGPACEymECPKG 24
                6************96667776 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.012
                STT-B-CC--B-S----BSBSTTE...E---S- CS
  PF00053.19  3 CnphgsssssCdsstgqClCkenv...eGrkCd 32
                C+++    + C +s g+C+C   +   eG  C+
  MMETSP1325-20131115|6496_1 43 CSNR----GICSRSGGTCSCDSTYsvfEGAACH 71
                4444....59**********9886222566665 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.6
                --B-S----B CS
  PF00053.19 11 ssCdsstgqC 20
                  C  + g+C
  MMETSP1325-20131115|6496_1 82 MACGDTRGTC 91
                5666677777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|6500_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0039   16.1  12.5     0.0047   15.9   8.7    1.1  1  PF00261.15 Tropomyosin
  ------ inclusion threshold ------
      0.053   13.3   5.6      0.052   13.3   3.0    1.7  1  PF14282.1  FlxA-like protein
      0.062   13.2   9.7       0.21   11.4   4.6    2.1  2  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
       0.12   12.0   7.5       0.13   11.9   0.9    2.0  2  PF06009.7  Laminin Domain II
       0.15   11.4   7.6        4.8    6.5   2.7    2.6  2  PF05529.7  B-cell receptor-associated protein 31-like
       0.18   11.3   6.9       0.16   11.4   4.3    1.3  1  PF13874.1  Nucleoporin complex subunit 54
       0.31   10.3   7.1       0.35   10.1   4.6    1.4  1  PF06810.6  Phage minor structural protein GP20
       0.39    8.8  10.6       0.42    8.7   7.3    1.0  1  PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
        0.4    9.0   9.7       0.45    8.8   6.7    1.0  1  PF05667.6  Protein of unknown function (DUF812)
       0.44    9.8   3.6         11    5.3   0.0    3.0  3  PF10393.4  Trimeric coiled-coil oligomerisation domain of matrilin
        0.5   10.2   5.0       0.36   10.7   1.7    1.9  2  PF02318.11 Rabphilin-3A effector domain N-terminal
       0.56    8.6   7.5       0.67    8.4   5.2    1.2  1  PF08317.6  Spc7 kinetochore protein
       0.67    9.9   5.4       0.87    9.5   3.7    1.3  1  PF08748.6  Domain of unknown function (DUF1789)
       0.86    9.4   9.4       0.73    9.6   3.2    2.4  2  PF14193.1  Domain of unknown function (DUF4315)
        1.1    8.3   8.7        1.4    8.0   6.1    1.2  1  PF11932.3  Protein of unknown function (DUF3450)
        1.2    8.8  10.5        7.1    6.4   2.7    2.2  2  PF11559.3  Afadin- and alpha -actinin-Binding
        1.3    7.1   4.7        1.4    7.1   3.3    1.1  1  PF10359.4  RNA pol II promoter Fmp27 protein domain
        1.5    7.0   6.8        1.6    6.9   4.7    1.0  1  PF13166.1  AAA domain
        1.7    8.8   5.6        2.3    8.3   3.9    1.3  1  PF03234.9  Cdc37 N terminal kinase binding
        2.4    7.5   9.0        4.3    6.7   6.3    1.5  1  PF04156.9  IncA protein
        2.5    8.3   7.3         15    5.9   0.2    3.0  3  PF04102.7  SlyX
          3    4.9  13.0        3.1    4.8   9.0    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
        3.5    6.3   6.2        4.5    6.0   4.3    1.3  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        3.8    7.0   9.0        5.9    6.3   6.2    1.5  1  PF03962.10 Mnd1 family
        4.8    5.3   8.5        4.9    5.3   5.9    1.0  1  PF04632.7  Fusaric acid resistance protein family


Domain annotation for each model (and alignments):
>> PF00261.15  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   8.7   8.6e-06    0.0047     134     233 ..       2     101 ..       1     109 [. 0.81

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 8.6e-06
  PF00261.15 134 eraeaaeskiaeLeeelkvvgnnlksLevseekaseredkyeekiklLtekLkeaetRaeeAErsvqkLekevdrledeleaekekykaiseeldqtlae 233
                 +r+e++ ++i+ L+ +l+ vg+  k+ e ++  a+   ++ e+ki +L+e+L      ae   ++ +  + ev+rl+ el+a     +a+  e+   ++ 
  MMETSP1325-20131115|6500_1   2 KRLESSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMTALRMEVSGQMSA 101
                 6999************************************************655555555455555556688888888888888888877777665555 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   3.0   9.5e-05     0.052      16      78 ..       6      71 ..       2      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 9.5e-05
   PF14282.1 16 ssdsqiksLqkqiqsltkqlkelssd...eeltaeekqkqqqliqqQIqalqaQiaqlqsqqseea 78
                ss+++i++L+ q++ + +  ke+++    ++ t ee + + + +q+Q++ +      + +q +  +
  MMETSP1325-20131115|6500_1  6 SSTTEIEALKAQLEGVGEHDKEVEQAaaaAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAK 71
                6799*******************9986655668899999999999999999888777777665554 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1      0.12        68      47      70 ..       4      27 ..       2      34 .. 0.76
   2 ?   11.4   4.6   0.00039      0.21      17      75 ..      37      95 ..      23     114 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.12
   PF10473.4 47 aenskaevetLktkieemaeelkd 70
                +e s  e+e+Lk+++e + e+ k+
  MMETSP1325-20131115|6500_1  4 LESSTTEIEALKAQLEGVGEHDKE 27
                678888999999998887776655 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.00039
   PF10473.4 17 readlLkdkvenLErELelseenqelvileaenskaevetLktkieemaeelkdLeldL 75
                r ++  +dk+ +L   Le+  ++ e  + + e +kaeve L++++ +   ++ +L++++
  MMETSP1325-20131115|6500_1 37 RTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMTALRMEV 95
                4555568*************************************999999999999886 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.9   0.00024      0.13      21      70 ..       6      55 ..       1      59 [. 0.90
   2 ?    4.6   0.5     0.044        24      15      75 ..      56     113 ..      53     119 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00024
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7 21 gistnventkaklsklngsveetnekvksankavrdarrsvrkleklapq 70
                   t++e++ka+l+++ ++ +e+++ + +a  + +++++++ kl+++++ 
  MMETSP1325-20131115|6500_1  6 SSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEI 55
                55799************999***************************985 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.044
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7  15 VlkelegistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkL 75 
                 V ++ eg +++ e  ka++++ln++     + v s++    +++ ++++l+ + +  l+++
  MMETSP1325-20131115|6500_1  56 VTRDAEGHAQQHELAKAEVERLNSE---LVASVASMTALRMEVSGQMSALTAENEAKLARI 113
                 6667777788888899999999996...555666666666666677777766655544444 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1     0.011       6.1     167     186 ..       2      21 ..       1      26 [. 0.89
   2 ?    6.5   2.7    0.0087       4.8     130     182 ..      43      94 ..      21     103 .. 0.49

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.011
   PF05529.7 167 keleekekdlealkkqaegl 186
                 k+le++++++ealk q+eg+
  MMETSP1325-20131115|6500_1   2 KRLESSTTEIEALKAQLEGV 21 
                 789**************987 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0087
   PF05529.7 130 eeklealkkqaesatkaakkl.............keekekklkeeveklkkeleekekdlealkkq 182
                 e+k+ +              l             ++++++ +k+eve+l  el ++  +++al+  
  MMETSP1325-20131115|6500_1  43 EDKIAK--------------LqeqleivtrdaegHAQQHELAKAEVERLNSELVASVASMTALRME 94 
                 222233..............1233333333333355555556666666666666666666666655 PP

>> PF13874.1  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   4.3    0.0003      0.16      45     130 ..       3      89 ..       1     104 [. 0.88

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0003
   PF13874.1  45 evkqlrerlkeineklkelqkhdletskrieeakqkhqelshrllkvaakleilrnkgyalsaeeeelrnkleqlekelnap.aqlk 130
                  +++ ++ +++++ +l+ + +hd e+++  ++a + h e + ++ k+  +lei  +      ++ e  ++++e l++el a+ a++ 
  MMETSP1325-20131115|6500_1   3 RLESSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASvASMT 89 
                 5778889999******************************************9999988888999999**********999866554 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.6   0.00063      0.35      21      86 ..       3      72 ..       1      91 [. 0.86

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00063
   PF06810.6 21 kldkaeeeldslkeqlk...erdkqiedLkk.kvkdneeLkkkieklkeknkkkkeeyeaklkdlklnna 86
                +l+++++e+++lk ql+   e dk++e+  +  + ++ee ++ki+kl+e+ +  + ++e   ++ +l +a
  MMETSP1325-20131115|6500_1  3 RLESSTTEIEALKAQLEgvgEHDKEVEQAAAaAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKA 72
                678889999****998655589****999886788999**********************9999999877 PP

>> PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   7.3   0.00076      0.42     179     288 ..       3     109 ..       1     119 [. 0.90

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00076
   PF07888.6 179 aLatsekkteeLkekykeissseeeiseerniLsaqraenrerileLeddiqtlskkvreqeklleqlkeikaelerekaelkqrlkektvqikdeeteaidlqlelesl 288
                  L+ s+ + e Lk + +++ + ++e+ +   +  + + e +++i +L+++ + +++     e   +q +  kae er ++el   +  +t+ + +  ++   l +e+e  
  MMETSP1325-20131115|6500_1   3 RLESSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDA---EGHAQQHELAKAEVERLNSELVASVASMTALRMEVSGQMSALTAENEAK 109
                 6899**********************************************99999888...66667888889*******************99999*****999999964 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.7   0.00082      0.45     330     430 ..       4     108 ..       1     118 [. 0.70

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00082
   PF05667.6 330 lealqeqidelessieeveeeikalkskikeveeeleevkeeneeleeevkikkrtvelled....aeenvakLqalveasserlleLaqqWeahrkpLidelre 430
                 le+   +i++l+ + e v e+ k+++++ ++++   ee + ++++l+e+++i +r +e  ++    a  +v++L++ ++as +++  L  +   + ++L +e ++
  MMETSP1325-20131115|6500_1   4 LESSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQqhelAKAEVERLNSELVASVASMTALRMEVSGQMSALTAENEA 108
                 566667777777777777777777777777777777777777777777777766655433221111345789999999999999999999998888888888765 PP

>> PF10393.4  Trimeric coiled-coil oligomerisation domain of matrilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.021        11      21      35 ..       7      21 ..       5      30 .. 0.87
   2 ?    4.1   0.1     0.049        27      22      37 ..      43      58 ..      40      59 .. 0.90
   3 ?   -1.8   0.0       3.2   1.8e+03      22      32 ..      71      81 ..      68      83 .. 0.76

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.021
   PF10393.4 21 veeeiqkLtqKLeav 35
                 ++ei++L+++Le v
  MMETSP1325-20131115|6500_1  7 STTEIEALKAQLEGV 21
                6899*********88 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.049
   PF10393.4 22 eeeiqkLtqKLeavtk 37
                e++i kL+ +Le vt+
  MMETSP1325-20131115|6500_1 43 EDKIAKLQEQLEIVTR 58
                57899*******9996 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 3.2
   PF10393.4 22 eeeiqkLtqKL 32
                + e+++L++ L
  MMETSP1325-20131115|6500_1 71 KAEVERLNSEL 81
                67899999876 PP

>> PF02318.11  Rabphilin-3A effector domain N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.7   0.00066      0.36      38      89 ..      13      63 ..       4      66 .. 0.79
   2 ?    1.8   0.1       0.4   2.2e+02      37      56 ..      60      79 ..      56     118 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00066
  PF02318.11 38 ekkrkkeslteeekeiikkviaraeklealeqeriGrlvdrLeklrknvaGn 89
                + k++ e + e++ke +++  a a + ++ ++++i +l ++Le + + + G 
  MMETSP1325-20131115|6500_1 13 ALKAQLEGVGEHDKE-VEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGH 63
                556667777777777.577788899999999****************99996 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.4
  PF02318.11 37 aekkrkkeslteeekeiikk 56
                ae ++++++l+++e e ++ 
  MMETSP1325-20131115|6500_1 60 AEGHAQQHELAKAEVERLNS 79
                56677888888888887764 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.2    0.0012      0.67     171     264 ..       7      99 ..       1     113 [. 0.75

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0012
   PF08317.6 171 klelinsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeae 264
                   ++i+ ++ +l+    +  +e+++  +++ ++ e d+++++kl+e+L+ ++ + e + ++ e  ++e++ l+ ++ a+  +++ l+ e++ + 
  MMETSP1325-20131115|6500_1   7 STTEIEALKAQLEGVG-EHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMTALRMEVSGQM 99 
                 4445555444444333.33566677777777799999999999999999999999999999999999999999999999999999999987655 PP

>> PF08748.6  Domain of unknown function (DUF1789)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.7    0.0016      0.87      47     114 ..      19      89 ..       3     112 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0016
   PF08748.6  47 eereqseakeeekaaae...edleasidkglaldaelikevatGWdldeefneenielLvekfpgaleail 114
                 e+ ++++++ e+ aaa+   ++  +   ++l+ + e++++ a+G   ++e+ ++ +e L +++++++  ++
  MMETSP1325-20131115|6500_1  19 EGVGEHDKEVEQAAAAAartHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMT 89 
                 3334444333333333355555555555678889*****************************99987655 PP

>> PF14193.1  Domain of unknown function (DUF4315)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.8      0.33   1.8e+02      51      71 ..       9      36 ..       2      48 .. 0.41
   2 ?    9.6   3.2    0.0013      0.73       2      60 ..      45     102 ..      40     120 .] 0.70

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.33
   PF14193.1 51 eeLaallkalke.......sgqeapkad 71
                +e++al+++l          +q+a +a 
  MMETSP1325-20131115|6500_1  9 TEIEALKAQLEGvgehdkeVEQAAAAAA 36
                4555555554333333221222222222 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0013
   PF14193.1   2 kiekieaeieKtkeKiaelqarlkeLekqktEaENleIvqiVRsldmspeeLaallkal 60 
                 ki k+++ +e +  + ae  a++ eL k+  E  N+e+v  V s+     e +  ++al
  MMETSP1325-20131115|6500_1  45 KIAKLQEQLEIVT-RDAEGHAQQHELAKAEVERLNSELVASVASMTALRMEVSGQMSAL 102
                 4445555554443.3356667************************98887777766666 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   6.1    0.0025       1.4      19     109 ..      13     100 ..       4     116 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0025
   PF11932.3  19 vaaasldqaqeaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieetrqeivPlml 109
                 + +a+l+ + e  ++  +aaa++    ++ +d+ ++l++++e +++++e+ + +++  +++ve  ++el +   ++++++ +r e++  m 
  MMETSP1325-20131115|6500_1  13 ALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVA---SVASMTALRMEVSGQMS 100
                 457899999999****************************************************9998765...55555556666655554 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   2.7     0.013       7.1      75     125 ..       4      54 ..       1      61 [. 0.60
   2 ?    5.9   0.5     0.018        10      55     105 ..      61     112 ..      56     118 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.013
   PF11559.3  75 ierlktqleqlerelallqekerqlekklktleqklknekeelqrlkniiq 125
                 +e  +t+ e+l+ +l+++ e +++ e+  + + +++ +  + +++l+  ++
  MMETSP1325-20131115|6500_1   4 LESSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLE 54 
                 455556666666666666666666666666666666666666666665543 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.018
   PF11559.3  55 esleetlrkleaeierlqskierlktqleqlerela.llqekerqlekklkt 105
                 e +++++   +ae erl+s++     +  +l++e++ ++ +  +++e+kl++
  MMETSP1325-20131115|6500_1  61 EGHAQQHELAKAEVERLNSELVASVASMTALRMEVSgQMSALTAENEAKLAR 112
                 56788999999************************97777777778887765 PP

>> PF10359.4  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.3    0.0025       1.4     171     237 ..       3      74 ..       1     111 [. 0.56

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0025
   PF10359.4 171 Rlkeleeqikkleeklkelel.....nkddeelqkdleelekelselkerleflekeleelekeeeesekss 237
                 Rl++ +++i+ l+ +l+         ++ + + + ++ee e+++++l+e+le+++ + e   ++ e ++++ 
  MMETSP1325-20131115|6500_1   3 RLESSTTEIEALKAQLEGVGEhdkevEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEV 74 
                 666666666666666666544333333444555556666666666666666666666665555554444333 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.7     0.003       1.6     391     504 ..       9     117 ..       2     120 .] 0.66

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.003
   PF13166.1 391 eeknkakkklwlhlvaelkedideyekklkklekkinslekeleklekeikklekeikelekelkneeptaeeinkeLkaygfgeleLeieeekkgyrivrkggeqaaenLSEG 504
                 +e +++k++l+   v e+++++   e++ ++ +++ ++ e++++kl+++++  + + +  +++ + ++  +e++n+eL a   ++  L++e  +++  ++ +++ + a+   +G
  MMETSP1325-20131115|6500_1   9 TEIEALKAQLE--GVGEHDKEV---EQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMTALRMEVSGQMSALTAENEAKLARITAQG 117
                 44444444443..355555554...34445555566666777777777777766667777777777788899999999999889999999998998888888877666655555 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.9    0.0042       2.3      40     126 ..       3      91 ..       1     119 [. 0.64

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0042
   PF03234.9  40 kreqrkkeieelekelkinkkllervdkllselkeeeelssekvlkklneeadkedka..sveeeeeeqpkynemledLldqvkdevde 126
                 + e+ + eie l+++l+   +  ++v++  +++ +++e +++k++k  ++ +  +  a  + +++e  +++ + + ++L+  v + +  
  MMETSP1325-20131115|6500_1   3 RLESSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAegHAQQHELAKAEVERLNSELVASVASMTAL 91 
                 5577889**********************999999988898888887776554443331245555555666777777888877333322 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.3    0.0079       4.3      80     173 ..      22     108 ..       1     118 [. 0.79

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0079
   PF04156.9  80 qeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrselerlqed 173
                  e+ +e e+  + +++  e+ e ++a+l+++le + +d e + ++ +  ++++e l++++ +  ++++ lr        ev  + s+l+++ e+
  MMETSP1325-20131115|6500_1  22 GEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMTALR-------MEVSGQMSALTAENEA 108
                 45778888888888899999999999999999999999999999999999999999999999999999999.......7777777777776444 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.2     0.028        15      31      61 ..       8      38 ..       2      43 .. 0.76
   2 ?    4.3   0.7     0.083        45      31      60 ..      43      72 ..      40      77 .. 0.73
   3 ?    1.8   0.2      0.51   2.8e+02      20      42 ..      74      96 ..      65     115 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.028
   PF04102.7 31 qkeidrlqrqlrllaerlkeleessneasea 61
                + ei++l++ql+ + e  ke+e+ +  a   
  MMETSP1325-20131115|6500_1  8 TTEIEALKAQLEGVGEHDKEVEQAAAAAART 38
                6799999999999999999999666554443 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.083
   PF04102.7 31 qkeidrlqrqlrllaerlkeleessnease 60
                +++i++lq+ql+ +++  +   ++ + a++
  MMETSP1325-20131115|6500_1 43 EDKIAKLQEQLEIVTRDAEGHAQQHELAKA 72
                578999999999999998887755555544 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.51
   PF04102.7 20 ieeLNevvaeqqkeidrlqrqlr 42
                +e+LN ++++    +++l+ +++
  MMETSP1325-20131115|6500_1 74 VERLNSELVASVASMTALRMEVS 96
                67888888887777777776665 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   9.0    0.0057       3.1     615     728 ..       3     115 ..       1     120 [] 0.62

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0057
   PF12128.3 615 alqsaeakqkqaeeqlkqlnaeleeakravaeakqalkqarlelqrlkneqqslkdklekalaerkqqaeeqlqkldaelkqleekkkaaleelkddlreerlekkakwqeveg 728
                  l+s + +++++ +ql+ + ++ +e ++a+a a+++ ++ ++++ +l+++ +   +  e    ++ + a+++++ l++el +  + + a+  e   +++ ++ e +ak++ + +
  MMETSP1325-20131115|6500_1   3 RLESSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEEDEDKIAKLQEQLEIVTRDAEGHA-QQHELAKAEVERLNSELVASVASMTALRMEVSGQMSALTAENEAKLARITA 115
                 56666666777777777766666666666666777777777777777766666555555443.344556667777777777777777777777777777777777766666554 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   4.3    0.0082       4.5      36     162 ..      11      94 ..       1     119 [. 0.39

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0082
   PF10186.4  36 ketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklnslesltaekRsqlcrelaklfplrrv 162
                  e+lk ++e   e++++   +aa + +  +++ +++i+++++                                          ql+ ++ + +   ++++  + ++++  s l+  +a+++ lr +
  MMETSP1325-20131115|6500_1  11 IEALKAQLEGVGEHDKE-VEQAAAAAARTHEEDEDKIAKLQE------------------------------------------QLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMTALRME 94 
                 23333333333331111.333333333334444444444444..........................................4444444444444444444444444444444444444444444 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   6.2     0.011       5.9      66     142 ..       6      79 ..       1     118 [. 0.56

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.011
  PF03962.10  66 klkteleklkkeleelkqrikelqaeiekekkkreeteereelleelkeleeelkklkkele...klakldpekveklke 142
                 +  te+e+lk++le + +  ke++++ ++++++ ee+       +++++l+e+l+ + ++ e   +  +l +++ve+l+ 
  MMETSP1325-20131115|6500_1   6 SSTTEIEALKAQLEGVGEHDKEVEQAAAAAARTHEED------EDKIAKLQEQLEIVTRDAEghaQQHELAKAEVERLNS 79 
                 4556677777777777777777766666665555555......3344444444444444433322222222333333333 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.9    0.0089       4.9     238     324 ..      14      97 ..       2     119 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0089
   PF04632.7 238 llaalraaaaatppelaalldelaaalaaeeleaavaaLrarlaalrpeaeadsdtaaallarlaellaeladalaalralqaaiaa 324
                 l a+l   ++++ +e++++ +++a+  + ee+e+++a L+++l+   ++ae ++ +++++ a++  l +el++  a+++al+ +++ 
  MMETSP1325-20131115|6500_1  14 LKAQLEGVGEHD-KEVEQAAAAAAR--THEEDEDKIAKLQEQLEIVTRDAEGHAQQHELAKAEVERLNSELVASVASMTALRMEVSG 97 
                 333333333333.236666666666..699999999999999999999999999999999999999999999999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1584  (0.115857); expected 273.4 (0.02)
Passed bias filter:                      836  (0.0611469); expected 273.4 (0.02)
Passed Vit filter:                       126  (0.00921592); expected 13.7 (0.001)
Passed Fwd filter:                        29  (0.00212112); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.69u 0.35s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 563.85
//
Query:       MMETSP1325-20131115|6502_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        93  (0.00680222); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|6501_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-29  100.6  17.4    7.5e-29  100.1  12.1    1.3  1  PF04178.7 Got1/Sft2-like family
  ------ inclusion threshold ------
        1.4    8.4  14.2       0.41   10.2   2.2    2.2  2  PF13903.1 PMP-22/EMP/MP20/Claudin tight junction


Domain annotation for each model (and alignments):
>> PF04178.7  Got1/Sft2-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.1  12.1   1.1e-32   7.5e-29       3     117 ..      39     152 ..      37     153 .. 0.97

  Alignments for each domain:
  == domain 1    score: 100.1 bits;  conditional E-value: 1.1e-32
   PF04178.7   3 GvlfmllsliflflpvlllkplkFavlftlGnllflgslafliGpkkqlkfmfskerlpaTliyivslvltlyvalilksylltvlfsllqvlalvwyllsylPggepllkllls 117
                 + +fm+l+ +f+ lpv++++p+kFa++ft+++++f++s+++l+Gp++++  m+ ++rl +T +y++s++ltly+al+++sy+++v  s lq++a+++y +s++Pgg++++k +l 
  MMETSP1325-20131115|6501_1  39 AGFFMFLA-FFVGLPVIVFRPHKFALCFTMSSVMFMASFGLLKGPRAHVLSMLAPDRLQFTGAYVGSMALTLYAALVVRSYVMVVASSSLQIAAMAYYFMSFIPGGTRGVKIFLA 152
                 5589****.9****************************************************************************************************99875 PP

>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.2     6e-05      0.41      68     112 ..      29      76 ..       9      80 .. 0.74
   2 ?    4.0   2.3    0.0048        33      87     120 ..     107     140 ..      95     176 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 6e-05
   PF13903.1  68 trvvivflllglvlillaavlallaslkksk..tllll.tgvllllag 112
                 ++++++ ll++ ++++la++++l   +++++  +l+ + ++v++ +++
  MMETSP1325-20131115|6501_1  29 FKWFVTTLLMAGFFMFLAFFVGLPVIVFRPHkfALCFTmSSVMFMASF 76 
                 466677788888******************977444441445555554 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0048
   PF13903.1  87 vlallaslkksktlllltgvllllagilillavv 120
                 +++ +a++ +s+++++++++l+++a +  +  ++
  MMETSP1325-20131115|6501_1 107 LTLYAALVVRSYVMVVASSSLQIAAMAYYFMSFI 140
                 334466788999*************999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       643  (0.0470304); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 875.40
//
Query:       MMETSP1325-20131115|6503_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 781.03
//
Query:       MMETSP1325-20131115|6505_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|6504_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 263.13
//
Query:       MMETSP1325-20131115|6508_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.49    9.3   5.4       0.57    9.1   3.7    1.1  1  PF01690.12 Potato leaf roll virus readthrough protein
        6.3    6.1  16.0    1.2e+02    1.9  11.1    2.6  1  PF04886.7  PT repeat


Domain annotation for each model (and alignments):
>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.7   8.3e-05      0.57       4      27 ..      15      38 ..      12      49 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 8.3e-05
  PF01690.12  4 epgPkPgPsPtPpppPqPtPePtP 27
                +++P+  P+P+P++  +PtPePt 
  MMETSP1325-20131115|6508_1 15 SAEPSGMPTPKPTLSFSPTPEPTV 38
                6899999999999*********95 PP

>> PF04886.7  PT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9  11.1     0.018   1.2e+02       2      23 ..      14      37 ..       5      39 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.018
   PF04886.7  2 pTaqPteqPTvqPTg..qPtaqPT 23
                p+a+P++ PT  PT    Pt++PT
  MMETSP1325-20131115|6508_1 14 PSAEPSGMPTPKPTLsfSPTPEPT 37
                677777777777775224666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 357.01
//
Query:       MMETSP1325-20131115|6507_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-08   33.7   0.0    1.7e-08   33.4   0.0    1.1  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.0   1.3e-12   1.7e-08     278     329 ..      17      68 ..       9      72 .. 0.86

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 1.3e-12
                 HT.TTSS-CGGGSHHHHHTGGCH--..--EEEEEEEE--BGGGHHHHHHHHHHH CS
  PF00225.18 278 enkkskhvpYRdSkLTrlLqdsLgg..nsktlmivtvspsssnleetlstLrfa 329
                 +    +  pYR S LTr+L+++++   ++ +++i +vsp+++++++tl+tL+  
  MMETSP1325-20131115|6507_1  17 DP--LAQAPYRASALTRVLRECFQPgtDQSIAVIGCVSPTTTDVQHTLNTLDHV 68 
                 44..6789***************754488999*******************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 496.09
//
Query:       MMETSP1325-20131115|6510_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.33s 00:00:00.63 Elapsed: 00:00:00.54
# Mc/sec: 213.01
//
Query:       MMETSP1325-20131115|6509_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   11.1   0.7       0.31   10.3   0.5    1.3  1  PF03743.9  Bacterial conjugation TrbI-like protein
          1    9.6   0.1          1    9.6   0.1    3.8  5  PF01851.17 Proteasome/cyclosome repeat


Domain annotation for each model (and alignments):
>> PF03743.9  Bacterial conjugation TrbI-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.5   4.5e-05      0.31      81     118 ..     197     233 ..     189     245 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 4.5e-05
   PF03743.9  81 lkgspgaDelGkaGirGrvdnhfgqrfggalllsllsg 118
                 l g  +++ +G aG+ G+v  +fg   +g ll+++ ++
  MMETSP1325-20131115|6509_1 197 L-GVDFVGLDGTAGFGGDVERRFGLAHAGCLLAGVGAA 233
                 5.6667789****************9999999987544 PP

>> PF01851.17  Proteasome/cyclosome repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.3         2   1.4e+04       1       9 [.      62      70 ..      62      70 .. 0.83
   2 ?   -2.1   0.8      0.75   5.2e+03       7      16 ..      76      85 ..      76      89 .. 0.74
   3 ?   -2.1   0.8      0.75   5.2e+03       7      16 ..      96     105 ..      96     109 .. 0.74
   4 ?    9.6   0.1   0.00015         1       4      18 ..     159     173 ..     159     176 .. 0.88
   5 ?   -1.3   0.2      0.43     3e+03       7      12 ..     219     224 ..     218     225 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 2
  PF01851.17  1 GAalALGli 9 
                G +lA G++
  MMETSP1325-20131115|6509_1 62 GGVLAFGVA 70
                789999986 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.75
  PF01851.17  7 GlihaGsgne 16
                Gl++aG g+ 
  MMETSP1325-20131115|6509_1 76 GLAGAGGGDL 85
                8999997664 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.75
  PF01851.17   7 GlihaGsgne 16 
                 Gl++aG g+ 
  MMETSP1325-20131115|6509_1  96 GLAGAGGGDL 105
                 8999997664 PP

  == domain 4    score: 9.6 bits;  conditional E-value: 0.00015
  PF01851.17   4 lALGlihaGsgneea 18 
                 lALG++++G+g e+a
  MMETSP1325-20131115|6509_1 159 LALGVANCGDGAERA 173
                 8**********9976 PP

  == domain 5    score: -1.3 bits;  conditional E-value: 0.43
  PF01851.17   7 GlihaG 12 
                 Gl+haG
  MMETSP1325-20131115|6509_1 219 GLAHAG 224
                 9****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.68
# Mc/sec: 870.44
//
Query:       MMETSP1325-20131115|6512_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-24   85.7   0.1    2.8e-24   85.4   0.0    1.2  1  PF03952.11 Enolase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF03952.11  Enolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.4   0.0     2e-28   2.8e-24       2      61 ..      41      98 .]      40      98 .] 0.98

  Alignments for each domain:
  == domain 1    score: 85.4 bits;  conditional E-value: 2e-28
                --EEE-EEEE-----EEEEEEEE----.-EEEE----------S--------TTTT---- CS
  PF03952.11  2 IekikareildSrGnpTvevevtlesgalgraavPsgaStgekealelrdgdkkrylgkg 61
                I+++kareildSrGnpTvev++t+++g l++a+vPsgaStg++ea+elrdg+ +ry+gkg
  MMETSP1325-20131115|6512_1 41 ITSVKAREILDSRGNPTVEVDLTTDQG-LFTASVPSGASTGAYEACELRDGG-SRYMGKG 98
                99*************************.99**********************.******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|6515_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|6517_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0023   18.1   4.6     0.0032   17.6   3.2    1.2  1  PF01620.11 Ribonuclease (pollen allergen)
  ------ inclusion threshold ------
       0.21   10.4   3.0       0.27   10.0   2.1    1.2  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF01620.11  Ribonuclease (pollen allergen)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   3.2   4.7e-07    0.0032      37     147 ..      22     137 ..      12     141 .. 0.64

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 4.7e-07
                 .........X---HHHHHHHHHHHHHHH.HHHHHHTTTS-HHHHHHHHHHHH.HHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHTS-TT...THHHHHHHHHHHHHHHH---- CS
  PF01620.11  37 tpaatpaaaagkatteeqkliedinagf.kaavaaaaevppadkfktFeeal.taaskaqvasasskaaklsskldaayklaYkaaqgatpe...aKydafvaalteaLrviagtl 147
                 t++a+   a  +  t e+ l+++ n +f +aa+ a+  v +    k+ e a+  + + +++a+a++ + + ++   a  + + ++aq a+ e   aK+da  aal e+L vi+g l
  MMETSP1325-20131115|6517_1  22 TSRASRSFAEARSPTLERVLVDERNRSFvQAARDATRAVVREAVGKAVERAMrEGLNDGAAAAAAAAHEEAKQTAMAGVRESCEQAQKAAIEalqAKFDAERAALKEELSVISGRL 137
                 444544444445568899999888888733444454455555566888888855555555555555333333334444555566666666552227******************87 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   2.1   3.9e-05      0.27      35     115 ..      61     142 ..      46     162 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 3.9e-05
   PF10186.4  35 eketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieq.lkeeieqkrerieelkealaqrrsdle.asaqlek 115
                 ++e+++k ve+a+ e+ n+++ aa + ++e+a k+  ++ +r+ +eq +k++ie+++++ ++ ++al++  s ++ +  ++ +
  MMETSP1325-20131115|6517_1  61 VREAVGKAVERAMREGLNDGAAAAAAAAHEEA-KQTAMAGVRESCEQaQKAAIEALQAKFDAERAALKEELSVISgRLHDKSD 142
                 57888899999999888865555555555544.44455666666654267889999999999999998887777665444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1291  (0.0944266); expected 273.4 (0.02)
Passed bias filter:                      658  (0.0481276); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.47s 00:00:00.99 Elapsed: 00:00:00.52
# Mc/sec: 751.17
//
Query:       MMETSP1325-20131115|6513_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       100  (0.00731422); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.84
# Mc/sec: 339.48
//
Query:       MMETSP1325-20131115|6518_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.66
# Mc/sec: 994.85
//
Query:       MMETSP1325-20131115|6519_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.099   12.2   0.0       0.15   11.6   0.0    1.3  1  PF12971.2 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain


Domain annotation for each model (and alignments):
>> PF12971.2  Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.1e-05      0.15      14      52 ..       3      42 ..       2      49 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.1e-05
                --TTGG.EEE---------EEEEEEE-----EEEE----- CS
   PF12971.2 14 pehvks.felevsesergldeFeissaksgkvlirGnsgv 52
                +e++++  ++++++++++++ +++ ++++ +  i G+s v
  MMETSP1325-20131115|6519_1  3 GEWMGAkAAVKIINDAWEKNVYRLITDEDEQMAILGSSTV 42
                578888899***************9999**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       473  (0.0345963); expected 273.4 (0.02)
Passed bias filter:                      437  (0.0319631); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.47s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 366.24
//
Query:       MMETSP1325-20131115|6516_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0002   20.9   1.7    0.00033   20.1   1.2    1.3  1  PF02183.13 Homeobox associated leucine zipper
     0.0078   15.5   0.0      0.011   15.0   0.0    1.3  1  PF04977.10 Septum formation initiator
  ------ inclusion threshold ------
       0.03   13.4   0.1       0.04   13.0   0.1    1.1  1  PF09789.4  Uncharacterized coiled-coil protein (DUF2353)
      0.051   13.4   0.9      0.051   13.4   0.6    1.5  2  PF00170.16 bZIP transcription factor
      0.078   12.5   0.0       0.12   12.0   0.0    1.3  1  PF10805.3  Protein of unknown function (DUF2730)
      0.098   12.4   0.6      0.098   12.4   0.4    2.0  2  PF05377.6  Flagella accessory protein C (FlaC)
        3.7    7.1   7.1       0.27   10.7   1.7    1.5  2  PF02344.10 Myc leucine zipper domain


Domain annotation for each model (and alignments):
>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   1.2   1.7e-07   0.00033      15      42 ..      98     125 ..      96     127 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.7e-07
  PF02183.13  15 daLkaendsLqkEkekLraevlsLkekl 42 
                 +a ++en+ L+kE e+Lra v++L+++ 
  MMETSP1325-20131115|6516_1  98 EAMRSENEQLRKEREELRATVEELNARI 125
                 7889********************9986 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.8e-06     0.011      26      51 ..      97     122 ..      88     132 .] 0.60

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5.8e-06
  PF04977.10  26 iaalqaelaklkaeneeLeaevkdLk 51 
                 ++a   e+++l++e+eeL a v++L+
  MMETSP1325-20131115|6516_1  97 VEAMRSENEQLRKEREELRATVEELN 122
                 45555666666666666666666662 PP

>> PF09789.4  Uncharacterized coiled-coil protein (DUF2353)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1     2e-05      0.04      73     102 ..      96     125 ..      90     127 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2e-05
   PF09789.4  73 lleesreeNkqLstdveeLrqrlkelqeDi 102
                 ++e +r eN+qL++++eeLr  ++el+  i
  MMETSP1325-20131115|6516_1  96 DVEAMRSENEQLRKEREELRATVEELNARI 125
                 7899*********************98765 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       3.6   7.1e+03      24      36 ..      47      59 ..      47      68 .. 0.57
   2 ?   13.4   0.6   2.6e-05     0.051      35      61 ..      97     123 ..      95     126 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 3.6
                HHHHHHHHHHHHH CS
  PF00170.16 24 KkaeieeLeekvk 36
                Kk+e  ++ ek+ 
  MMETSP1325-20131115|6516_1 47 KKEEFRKYLEKSG 59
                5566665555554 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 2.6e-05
                 HHHHHHHH.......HHHHHHHHHHHH CS
  PF00170.16  35 vkeLeaeNkaLkkeleelkkevaklks 61 
                 v+++ +eN++L+ke eel+ +v++l +
  MMETSP1325-20131115|6516_1  97 VEAMRSENEQLRKEREELRATVEELNA 123
                 89999******************9976 PP

>> PF10805.3  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     6e-05      0.12      58      93 ..      88     123 ..      76     126 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6e-05
   PF10805.3  58 leslPtakdvhaLkieltelrGelkelsaqiqslsh 93 
                 +   Pt  dv+a++ e ++lr e +el+a++++l+ 
  MMETSP1325-20131115|6516_1  88 YMGAPTGVDVEAMRSENEQLRKEREELRATVEELNA 123
                 5678***************************99986 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.71   1.4e+03      24      45 ..      49      73 ..      40      74 .. 0.61
   2 ?   12.4   0.4     5e-05     0.098      10      38 ..      98     126 ..      94     127 .. 0.72

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.71
   PF05377.6 24 eelsksvek...ikenvkdvlkLYE 45
                ee +k +ek   i+   k ++ LYE
  MMETSP1325-20131115|6516_1 49 EEFRKYLEKsgvIDALTKVLVGLYE 73
                5555555543334555577888888 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 5e-05
   PF05377.6  10 sklstvvatvrkeleelsksvekikenvk 38 
                   + ++ + +rke eel+++ve+++  +k
  MMETSP1325-20131115|6516_1  98 EAMRSENEQLRKEREELRATVEELNARIK 126
                 45566667788888888888888887777 PP

>> PF02344.10  Myc leucine zipper domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       2.9   5.6e+03       8      15 ..      46      53 ..      46      56 .. 0.74
   2 ?   10.7   1.7   0.00014      0.27       8      27 ..     102     121 ..      98     124 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 2.9
  PF02344.10  8 aEKdlLRk 15
                + K+  Rk
  MMETSP1325-20131115|6516_1 46 SKKEEFRK 53
                56888887 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00014
  PF02344.10   8 aEKdlLRkRREQLKHKLEQL 27 
                 +E ++LRk RE L+   E L
  MMETSP1325-20131115|6516_1 102 SENEQLRKEREELRATVEEL 121
                 8************8777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1037  (0.0758484); expected 273.4 (0.02)
Passed bias filter:                      913  (0.0667788); expected 273.4 (0.02)
Passed Vit filter:                       159  (0.0116296); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.44u 0.52s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 620.23
//
Query:       MMETSP1325-20131115|6524_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.34s 00:00:00.60 Elapsed: 00:00:00.47
# Mc/sec: 173.35
//
Query:       MMETSP1325-20131115|6523_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-19   69.9   0.0    1.8e-19   69.2   0.0    1.4  1  PF00027.24 Cyclic nucleotide-binding domain
  ------ inclusion threshold ------
          3    8.1   9.0         27    5.1   3.7    2.6  3  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   2.6e-23   1.8e-19       2      85 ..      98     176 ..      97     177 .] 0.97

  Alignments for each domain:
  == domain 1    score: 69.2 bits;  conditional E-value: 2.6e-23
                 EEE----EEE-TT-B--EEEEEEE-EEEEEEE-----EEEEEEE-TTEECSGGGCCSSSB-SSEEEEEEEEEEEEEEHHHHHHH CS
  PF00027.24   2 rsfkkgevifkeGdpadslyiilsGkvkvykndedgkesilaelgpGdffGelalltgeprsatvvaltdvevlvipredfrel 85 
                 ++f +g+vi+k+Gd +d++y++ sG++  +k+d +         ++G+ fGela++++ pr+at++a++++++++++r++f+++
  MMETSP1325-20131115|6523_1  98 KTFNAGDVIIKQGDDGDYFYVVDSGHIDCFKDDVKIT-----NYSKGGAFGELAIMYNAPRAATCQATEPTRLWALERKAFKAI 176
                 689*******************************998.....89*************************************976 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   3.7     0.004        27      63      82 ..       4      21 ..       1      26 [. 0.59
   2 ?    4.2   0.0    0.0076        52      15      36 ..      80     101 ..      62     111 .. 0.87
   3 ?   -3.3   0.0       1.6   1.1e+04      52      52 ..     151     151 ..     127     162 .. 0.43

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.004
  PF00428.14 63 aaaaeeekkeeeeeEeeddd 82
                 aaa++e +eeee   +ddd
  MMETSP1325-20131115|6523_1  4 DAAASDEDEEEEE--NSDDD 21
                4455555555554..78887 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0076
  PF00428.14  15 gveveaerlkllvkalegkdik 36 
                 ++ +e+++l++l++a+e+k+++
  MMETSP1325-20131115|6523_1  80 FKHLEPSQLNTLADAMESKTFN 101
                 7899**************9864 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 1.6
  PF00428.14  52 a 52 
                 a
  MMETSP1325-20131115|6523_1 151 A 151
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 922.08
//
Query:       MMETSP1325-20131115|6521_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-05   22.5   0.1       0.25   11.4   0.0    3.3  3  PF13516.1 Leucine Rich repeat
    0.00058   19.9  61.7     0.0017   18.4  22.0    2.3  2  PF13634.1 Nucleoporin FG repeat region


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0027        18      10      23 ..       1      14 [.       1      15 [. 0.88
   2 !   11.4   0.0   3.7e-05      0.25       2      23 ..      17      38 ..      16      39 .. 0.90
   3 ?    1.5   0.0     0.055   3.8e+02       4      24 .]      43      63 ..      40      63 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0027
   PF13516.1 10 snNqigdeGlsaLa 23
                +n+++gd G++aLa
  MMETSP1325-20131115|6521_1  1 NNTKVGDAGVQALA 14
                5789*********8 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 3.7e-05
   PF13516.1  2 knLtsLdLsnNqigdeGlsaLa 23
                  Lt + L n+++gd G++aL+
  MMETSP1325-20131115|6521_1 17 GALTKIYLDNTKVGDAGVQALG 38
                5699****************97 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.055
   PF13516.1  4 LtsLdLsnNqigdeGlsaLan 24
                Lt + L+n  ++  G++aLa+
  MMETSP1325-20131115|6521_1 43 LTKIWLGNSRVTHVGVQALAS 63
                8888899999*********95 PP

>> PF13634.1  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4  22.0   2.4e-07    0.0017       9     114 .]      81     192 ..      74     192 .. 0.74
   2 !    7.7  25.5   0.00053       3.6      16     102 ..     153     261 ..     153     289 .. 0.68

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 2.4e-07
   PF13634.1   9 aatsgglFGskpatggglFGasasqtast..aggglFGssntkats..ttggglFGssatttasstsggl..FGsstattqt..ttggglFGqaqaaqtqqssssttaggglFg 114
                 +++s+    ++p+ g ++FG+s+++t++t  + g+ FGss++ +++  + gg+ FGss++ ++++ sgg   FGss+a+ ++   +gg+ FG+++a+++  +s++  +g+++Fg
  MMETSP1325-20131115|6521_1  81 TNPSTPTVATQPKRGAFAFGSSPAPTPATvrGDGFTFGSSPAPTPApvSGGGFTFGSSPAPASAPVSGGGfrFGSSPAPASApvGSGGFRFGSSPASAS--ASAPVGSGAFAFG 192
                 45677777889999*******9988766666899*****998766666888999***998777766554434899998776634567777999999964..4666666666665 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.00053
   PF13634.1  16 FGskpa.......tggglFGasasqtast....aggglFGssntkats....ttggglFGssatttass....tsgglFGsstatt...qtttggglFGqaqaaqtqqs 102
                 FGs+pa       +gg+ FG+s+++++++    +g++ FGss+t+a++    + gg+ FGss++ ++++    ++ + FGss+++    +  +g + FG++++++++++
  MMETSP1325-20131115|6521_1 153 FGSSPApasapvgSGGFRFGSSPASASASapvgSGAFAFGSSPTSAPApapvSGGGFTFGSSPAPASAPapagSGAFAFGSSPTPApapAPVSGAFAFGSSASSSKSET 261
                 7887765566667789999998877655555667799999999886666666888999999996554332222445668888765532233457777888888754322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 1289.68
//
Query:       MMETSP1325-20131115|6525_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 414.37
//
Query:       MMETSP1325-20131115|6526_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-11   42.0   0.0    1.1e-10   41.5   0.0    1.2  1  PF01909.18 Nucleotidyltransferase domain
     0.0092   15.1   0.0      0.012   14.7   0.0    1.4  1  PF03710.10 Glutamate-ammonia ligase adenylyltransferase
  ------ inclusion threshold ------
       0.46   10.9   2.5        1.2    9.6   1.7    1.7  1  PF02045.10 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B


Domain annotation for each model (and alignments):
>> PF01909.18  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   2.5e-14   1.1e-10       1      67 [.      51     128 ..      51     133 .. 0.93

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 2.5e-14
                 HHHHHHHHHCT-TTSEEEEE-ETTTT---TT-EEEEEEEESTTSHH...........HHSHCHHHHHCCCHECCEEEE CS
  PF01909.18   1 lskllerlkelygvakvvlfGSyarGtllpgSDiDllvvlpkpldr...........iveeleelaeilkeleellgl 67 
                 lskl++++++l+++ +v ++GSy +++l  gSD+D++v++++ +d+           +++++ ++ae  +el++l ++
  MMETSP1325-20131115|6526_1  51 LSKLRQEVRKLWPDGSVRAYGSYETKLLGFGSDLDVVVFFERSDDDekgsraggapaKEQRQHNRAEAVYELQRLASV 128
                 689****************************************98899999999999999999999999999988765 PP

>> PF03710.10  Glutamate-ammonia ligase adenylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   2.7e-06     0.012     124     160 ..      60     103 ..      18     143 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.7e-06
                 -B-.--EEE-----------SS--EE-EEEE---TT-......- CS
  PF03710.10 124 evq.allvigmGKlGgrELnysSDiDlvfvyeeaeek......a 160
                 +   + +v ++G    + L+++SD+D+v+++e++++       +
  MMETSP1325-20131115|6526_1  60 KLWpDGSVRAYGSYETKLLGFGSDLDVVVFFERSDDDekgsraG 103
                 433467889999999999*************9988775544440 PP

>> PF02045.10  CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.7   0.00025       1.2      17      56 ..     111     161 ..     107     162 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00025
  PF02045.10  17 RRqkRakleeekk...........ldeksrkpylheSRhkhAlrRpRgsgG 56 
                 R+++Ra++  e +           ++++  + y h S h  A+r+ +g+gG
  MMETSP1325-20131115|6526_1 111 RQHNRAEAVYELQrlasvlrsccrVENERGQAYAHASAHAGAVRKGKGHGG 161
                 6666666655544567777777778888889*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      533  (0.0389848); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 706.29
//
Query:       MMETSP1325-20131115|6532_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 803.22
//
Query:       MMETSP1325-20131115|6530_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-08   34.2   0.2      2e-08   33.4   0.1    1.4  1  PF07766.8 LETM1-like protein


Domain annotation for each model (and alignments):
>> PF07766.8  LETM1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.1   1.5e-12     2e-08     181     254 ..     252     326 ..     224     338 .. 0.79

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 1.5e-12
   PF07766.8 181 kllelqplgt..dnllrfqLreklksikkdDkaikrEgvesLsveeLqsAcraRGlralglseealreqLqeWldl 254
                 + +++q ++   +  l+++L++ ++++ +dD+ +++Eg++ Ls++e++ A++aRGl  +   +  lr++L  W+ +
  MMETSP1325-20131115|6530_1 252 R-MNVQAIEQmpNFGLIRRLERIATELREDDRLLRAEGLDVLSEDEMRDAAVARGLVDVDDDAPVLRSKLAAWIAI 326
                 3.66666654213447899999999************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.57
# Mc/sec: 1512.18
//
Query:       MMETSP1325-20131115|6520_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.9e-110  367.4   1.4   2.2e-110  367.2   1.0    1.0  1  PF00244.15 14-3-3 protein
  ------ inclusion threshold ------
       0.04   13.6   0.0       0.15   11.8   0.0    1.9  2  PF07309.6  Flagellar protein FlaF


Domain annotation for each model (and alignments):
>> PF00244.15  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  367.2   1.0  3.2e-114  2.2e-110       1     232 [.       3     230 ..       3     234 .. 0.98

  Alignments for each domain:
  == domain 1    score: 367.2 bits;  conditional E-value: 3.2e-114
                 HHHHHHHHHHHHHTT-HHHHHHHH---TT---.--HHHHHHHHHHHHHH----HHHHHHHHHHHHHHT---------HHHHHHHHHHHHH---HHHH---TTTTHHHH---HHHHHHHHHH---HHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHS-TT-TTT---HHHHHHHHHHTSS-HHHHHHHHHHHHHHHHTTGGGSHHHHHHHHHHHHHHHHHHHHHHT--- CS
  PF00244.15   1 reelvylaklaeqaeryddmveamkklvelkeeLsveernLLsvayKnvigarRaswrilssieqkeeskgkekkvklikeyrkkiekeLkeiCedvlelldkklipkassseskvFylkmkgDyyRYlaEfssgeerkeaaekaleaYkeAleiaeselkpthpirLglaLnfsVFyYEilnspekAcelakqafdeaiaeldslseesykdstlimqLLrdNltlWtsee 232
                 r++lvy+akl+eqaer+d+mve+mk++++   eL+veernLLsvayKnvig+rRaswr+lssie k+++    +++ li++y+kkie+eL  iC+++l++++k+lipk++s+e kvFy+kmkgDy+RYlaEf+ g++rke ++kaleaY +A+  a++el+pthpirLglaLnfsVFyYEi+nsp++Ac+lakqafdeaiaeld+lseesykdstlimqLLrdNltlWts+ 
  MMETSP1325-20131115|6520_1   3 RDSLVYMAKLSEQAERFDEMVEHMKNVAQQAMELNVEERNLLSVAYKNVIGSRRASWRVLSSIEGKSDT----SQLPLIQDYKKKIEDELVAICDEILDIIEKELIPKSQSEEGKVFYYKMKGDYHRYLAEFQGGDTRKESSNKALEAYDNASRHAQHELPPTHPIRLGLALNFSVFYYEIMNSPDRACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDG 230
                 689***************************999********************************9876....59**********************************************************************************************************************************************************996 PP

>> PF07309.6  Flagellar protein FlaF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.39   2.7e+03      24      35 ..      19      30 ..       9      64 .. 0.60
   2 ?   11.8   0.0   2.2e-05      0.15       6      65 ..     176     236 ..     173     241 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.39
   PF07309.6 24 laratakLeqak 35
                ++++ +++++++
  MMETSP1325-20131115|6520_1 19 FDEMVEHMKNVA 30
                444444444444 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 2.2e-05
   PF07309.6   6 YaevaqstaspreiEaqalaratakLeqakeagkakleal.eAlkenrklWtilaadlsse 65 
                 Y e+++s   +  +  qa+++a+a+L++ +e++ ++ + + + l++n +lWt    d++++
  MMETSP1325-20131115|6520_1 176 YYEIMNSPDRACHLAKQAFDEAIAELDTLSEESYKDSTLImQLLRDNLTLWTSDGGDVEQP 236
                 7778888888888999**************88888887778**********9766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       875  (0.0639994); expected 273.4 (0.02)
Passed bias filter:                      649  (0.0474693); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.41s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1188.59
//
Query:       MMETSP1325-20131115|6534_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.6    8.1   6.2        2.9    8.4   0.3    2.1  2  PF13007.2 Transposase C of IS166 homeodomain


Domain annotation for each model (and alignments):
>> PF13007.2  Transposase C of IS166 homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.6     0.013   1.7e+02      40      64 ..       6      30 ..       3      35 .. 0.49
   2 ?    8.4   0.3   0.00021       2.9      16      50 ..      81     114 ..      81     116 .] 0.82

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.013
   PF13007.2 40 aaeaeaeaeeaaaetaarrrkrrkp 64
                aa++e + +++ + +++++ k r+ 
  MMETSP1325-20131115|6534_1  6 AAAVEKARAAPVKHATPDTDKSRRT 30
                4455555555555555534444443 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00021
   PF13007.2  16 GrkSEkldarqieQleLfeeleaaaaeaeaeaeea 50 
                 G++ E+  ++++++l L+++  +aaa+++ae e++
  MMETSP1325-20131115|6534_1  81 GARTETA-REETAELALAWDHVTAAAAVAAEIEAD 114
                 8999988.88899*****88888888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|6538_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 403.83
//
Query:       MMETSP1325-20131115|6535_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-09   37.8   0.2    2.3e-08   34.0   0.0    2.1  2  PF00106.20 short chain dehydrogenase
    1.6e-05   24.7   0.0     0.0018   18.0   0.0    2.2  2  PF13561.1  Enoyl-(Acyl carrier protein) reductase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   3.4e-12   2.3e-08      27     144 ..       6     123 ..       2     125 .. 0.83
   2 ?    1.5   0.1     0.032   2.2e+02     145     165 ..     163     183 ..     151     185 .. 0.78

  Alignments for each domain:
  == domain 1    score: 34.0 bits;  conditional E-value: 3.4e-12
                 EEEEEESS.SHHHHHHH.HHHHHH---EEEEEE--TTSHHHHHHHHHHHHHH----SEEEEE---TT-TTCCSC.HHHHHHHHHHHTHHHHHHHHHHHH.....HH---EEEEEECHHHHSSTT CS
  PF00106.20  27 hlvlvsrredapgaael.iaelealgaevtvvacDvadrdalaallaeirkalgpldgvvhnagvlddgpleeltperlervlapkvtgawllheltld.....adlgafvlfSSvagvlgspg 144
                 +++l+ r+      ael +a+ e+lg  ++++ +Dv++ ++++ + + +r+  g+ d +v+na+++ ++   +  + +   +l+++ +g+ ll+  +l+      +  a+v+++S+ag lg  g
  MMETSP1325-20131115|6535_1   6 RVILACRN------AELgRAAAETLGSPAEFAMLDVSSSESISSFASYMRETVGRCDTLVNNAAIAFKAADPTPFEGQTGPTLQTNYYGTSLLTDELLPlirstGEEPAIVFVASMAGRLGQLG 123
                 67777777......333334456889***************************************874444444588999*******************997644499***********99866 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.032
                 .HHHHHHHCHHHCCHHHHHHH CS
  PF00106.20 145 qaaYaaakaaldalaesrrae 165
                  ++Y+ +k a+ a ++  ++e
  MMETSP1325-20131115|6535_1 163 NSNYGVSKLAVIAYTKMIARE 183
                 579************998887 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.6e-07    0.0018      43      90 ..      25      71 ..       3     118 .. 0.70
   2 !    4.6   0.0    0.0032        22     148     186 ..     165     204 ..     155     210 .. 0.81

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2.6e-07
                ----------TT-SGGHHHHHHHHHHH.---BSEEEEEEE---T..TT CS
   PF13561.1 43 elpadvvplDvtseedvselaekvkedlggkiDilvhsianspeerve 90
                  pa++  lDv+s e++s++a +++e++ g++D lv+ +a++ + +  
  MMETSP1325-20131115|6535_1 25 GSPAEFAMLDVSSSESISSFASYMRETV-GRCDTLVNNAAIAFKAADP 71
                2468899********************7.********99998774433 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0032
                 --------THHHHHHHHHH.----S---EEEEEE------ CS
   PF13561.1 148 gmsvaKAaLEsltRvlAve.lgrkkgiRvntisaGplktr 186
                 +++v+K a+   t+++A+e ++   g+Rvn+   G   t 
  MMETSP1325-20131115|6535_1 165 NYGVSKLAVIAYTKMIAREeAAAGSGVRVNACCPGYCDTD 204
                 799999999999****975366779******999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 1208.16
//
Query:       MMETSP1325-20131115|6539_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-06   26.4   0.0      6e-06   25.6   0.0    1.3  1  PF02077.10 SURF4 family


Domain annotation for each model (and alignments):
>> PF02077.10  SURF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   4.4e-10     6e-06     229     262 ..      66      99 ..      61     102 .. 0.91

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 4.4e-10
  PF02077.10 229 lrdflkYdffqtlsviGGLLlvvatGpGelsvDe 262
                 + d+ +Y ffq ls+ G L+l+ + GpGe++v e
  MMETSP1325-20131115|6539_1  66 IYDLHRYYFFQGLSASGALMLLAQFGPGEIAVQE 99 
                 5799***************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 596.43
//
Query:       MMETSP1325-20131115|6541_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 586.86
//
Query:       MMETSP1325-20131115|6540_1  [L=427]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-35  119.7   3.1    1.5e-34  118.7   2.1    1.4  1  PF07479.9  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
    3.5e-29  101.4   0.2    3.9e-17   62.3   0.2    2.5  2  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
    1.5e-05   24.3   0.0    3.1e-05   23.3   0.0    1.5  1  PF02558.11 Ketopantoate reductase PanE/ApbA
    2.6e-05   24.0   0.0    5.3e-05   23.0   0.0    1.5  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
    3.7e-05   23.3   0.1     0.0001   21.9   0.1    1.8  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
    0.00025   20.3   0.1    0.00039   19.7   0.0    1.3  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
     0.0021   18.3   0.0      0.006   16.8   0.0    1.8  1  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
     0.0033   17.2   0.0      0.007   16.1   0.0    1.6  2  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.018   13.8   0.0       0.03   13.0   0.0    1.3  1  PF01266.19 FAD dependent oxidoreductase
       0.02   14.7   0.0      0.041   13.7   0.0    1.5  1  PF02254.13 TrkA-N domain
      0.029   14.3   0.1      0.065   13.2   0.1    1.6  1  PF01488.15 Shikimate / quinate 5-dehydrogenase
      0.033   14.0   0.0      0.099   12.5   0.0    1.9  1  PF13450.1  NAD(P)-binding Rossmann-like domain
      0.035   13.1   0.0      0.062   12.3   0.0    1.4  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
      0.035   14.3   0.1       0.18   12.1   0.0    2.2  2  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> PF07479.9  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   2.1   1.5e-37   1.5e-34       1     145 [.     283     423 ..     283     426 .. 0.97

  Alignments for each domain:
  == domain 1    score: 118.7 bits;  conditional E-value: 1.5e-37
                 S-----HHHHHHHHHHHHHHHHH---HHHTCCHHHHHHHHHHHHHHHHHH----GG.GG--------CCCCHT-TTSHHHH--------.--HHHHHHCH..SS-----CCHHHHHHHHHHCT-..--HHHHHHHHHHHS---HHHC CS
   PF07479.9   1 eDvvgveiagalKNViAiaaGivdglglgdntkaalitrglaEikklakllgeeeektflelaGlgDlivTclselgRNrrvgealakggksleeiekellegqvveGvktakevyellkkkel..kvplleavykilyeelkveev 145
                 +D+vgve++galKN +A++aG+++g+g+g nt aa++tr+++E+ kl +++g++ e t+++laG+gDl++T +++l+RNr++g+++ +g ++le+i +++    +veGv ta+ ++++ +  +l  ++p+++av  il   +k+ee+
  MMETSP1325-20131115|6540_1 283 QDTVGVELGGALKNPLAVGAGMIEGMGMGINTMAAMVTRATKELMKLCTAMGGKAE-TISGLAGIGDLMLTAFGDLSRNRTCGMRIIQG-EKLEDILATT----TVEGVPTAEVAMHFGQLCGLedELPIFTAVAGILAGTMKPEEA 423
                 699****************************************************9.********************************.9999999999....9******************9999*****************997 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   0.2     4e-20   3.9e-17       1      67 [.      41     108 ..      41     114 .. 0.95
   2 !   36.4   0.0   3.7e-12   3.6e-09      67     152 ..     172     260 ..     166     265 .. 0.92

  Alignments for each domain:
  == domain 1    score: 62.3 bits;  conditional E-value: 4e-20
                 EEEEE-------HHHHHHHTTEEEEEEE-S-HHHHHHHHHHTSBTTTBTT.-B--TTEEEES-HHHHH CS
  PF01210.18   1 kvavlGaGswGtalAkvlaenghevrlWvreeklieeinerrenvkylpg.iklpenlvattDleeal 67 
                 k++vlGaG++Gta+A+v a+n+hev++++r+++ +++in+++ n+ky  + ++lp+n++att+++e+ 
  MMETSP1325-20131115|6540_1  41 KICVLGAGAFGTAMAMVAARNNHEVVIYARDQAVVDSINNEHINPKYKMEtFTLPTNITATTNVAEVS 108
                 89*********************************************8888*************9986 PP

  == domain 2    score: 36.4 bits;  conditional E-value: 3.7e-12
                 H----CEEE-S-HHHHHHHCCCHCCCHHCT-EEEE-----BTTT-B-HHHHH..HHHS-GGG.EEEEE----HHHHHTT--EEEEEEES CS
  PF01210.18  67 lkgadiivlvVPsqflrevlkklkgllkkdailvsltKGieegtlkllsevi..eeelpiea.iavlsGpslAeEvakgkptavviask 152
                  +ga +i+ ++P q   +++k++k ++++++ + s++KG+   + +llse+i   + l+ e+ +a+lsGps+A  + ++ ptavv+++k
  MMETSP1325-20131115|6540_1 172 GSGAGLIMHALPAQKSPDFFKEHKDVIPDTVLICSTAKGLYLRSKCLLSEAIlgPDGLGREQpLAFLSGPSFAVQIMQETPTAVVVGAK 260
                 57999***********************************999*******9955578888888***********************986 PP

>> PF02558.11  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   3.2e-08   3.1e-05       1      76 [.      42     120 ..      42     138 .. 0.82

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 3.2e-08
                 EEEE-----------HHHHHHH-EEEE----.HHHHHH----EEE-SS-EEE---SEEES-T...TT----SEEEE--S CS
  PF02558.11   1 iailGaGaiGsllaakLakagadvtlilrsr.rlealkknglrlksdkgeeivrppealsee..kqelepidllivtvK 76 
                 i++lGaGa G+ +a   a+++++v++++r++  +++++++ ++ k + + ++++++ ++++   + + +++++ ++  K
  MMETSP1325-20131115|6540_1  42 ICVLGAGAFGTAMAMVAARNNHEVVIYARDQaVVDSINNEHINPKYKMETFTLPTNITATTNvaEVSHHHAQWHLLRWK 120
                 89*****************************99*********9999997777766666666677666677776666655 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   5.4e-08   5.3e-05       3      57 ..      41      95 ..      39     146 .. 0.81

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 5.4e-08
                EBEEB-------HHHHHHHH---EEEE--SSHHHHHHHHHTTEEE-SSHHHHHHH CS
  PF03446.10  3 kigfiGlGvMGspmalnllkagyevavynrtkekveelvaegakaaesieelvas 57
                ki ++G G  G+ ma   +++++ev++y r+++ v+++ +e++++ +++e ++  
  MMETSP1325-20131115|6540_1 41 KICVLGAGAFGTAMAMVAARNNHEVVIYARDQAVVDSINNEHINPKYKMETFTLP 95
                899***************************************9999999988655 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.1     1e-07    0.0001       1      42 [.      41      82 ..      41     113 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1e-07
                EEEEE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHS CS
  PF02737.13  1 kvaVvGaGtmGagiAavfaragleVvlvdiseealekaleri 42
                k+ V+GaG  G+ +A+v+ar+++eVv++ ++++ +++ +++ 
  MMETSP1325-20131115|6540_1 41 KICVLGAGAFGTAMAMVAARNNHEVVIYARDQAVVDSINNEH 82
                689******************************999876654 PP

>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0     4e-07   0.00039       2      45 ..      41      84 ..      40     110 .. 0.90

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 4e-07
                EEEEE------------TTT---EEE---S-HHHHHHHH----S CS
   PF03721.9  2 kiaviGlGYvGlptavvlaekghevvgvDineekvdklnsgkip 45
                ki+v+G+G  G  +a+v a+ +hevv+   +++ vd++n+++i 
  MMETSP1325-20131115|6540_1 41 KICVLGAGAFGTAMAMVAARNNHEVVIYARDQAVVDSINNEHIN 84
                8***************************************9875 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   6.2e-06     0.006       1      43 [.      41      79 ..      41     115 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 6.2e-06
  PF03807.12  1 kigiiGaGnigealakglaaagaqkheviiaasrspekaeela 43
                ki+++GaG +g+a+a  +a+++   hev+i   r++  + ++ 
  MMETSP1325-20131115|6540_1 41 KICVLGAGAFGTAMAMVAARNN---HEVVIY-ARDQAVVDSIN 79
                79********************...****66.88887766665 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   7.2e-06     0.007       1      57 [.      41      99 ..      41     155 .. 0.74
   2 ?   -3.5   0.0         7   6.9e+03     153     159 ..     253     282 ..     242     328 .. 0.60

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 7.2e-06
                SEEEE----HHHHHHHHHHHTTSEEEEE..CSSSSSTBTSGGHHHHHHHHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9  1 dvviiGgGpaGlsaakdlaqkglkvali..ekeggtcvnrgclpkkllvevaegreele 57
                +++++G+G+ G+++a  +a+++++v+++  ++    + n+ ++  k+  e+ + ++++ 
  MMETSP1325-20131115|6540_1 41 KICVLGAGAFGTAMAMVAARNNHEVVIYarDQAVVDSINNEHINPKYKMETFTLPTNIT 99
                689*************************5544444455777777777777777766654 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 7
                 EEEEE-.......................- CS
                 xxxxxx.......................x RF
   PF07992.9 153 kvvvvG.......................t 159
                 + vvvG                       t
  MMETSP1325-20131115|6540_1 253 TAVVVGakfmphavaiqrwlssmsfrvytT 282
                 456666555555555555554444443331 PP

>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.1e-05      0.03       2      31 ..      42      71 ..      41      84 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.1e-05
                EEEE----HHHHHHHHHHHTT-EEEEEESS CS
  PF01266.19  2 vviiGgGivGlstAyeLarrglkVtllekg 31
                +++ G+G++G + A  +ar +++V+++ ++
  MMETSP1325-20131115|6540_1 42 ICVLGAGAFGTAMAMVAARNNHEVVIYARD 71
                89************************9887 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.2e-05     0.041       1      43 [.      42      84 ..      42     107 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.2e-05
                EEEE---HHHHHHHCCCHH--..EEEEES-HHHHHHHHH---E CS
  PF02254.13  1 iiiiGlGrvGrslaeeLregekdvvvidkdeerveelreegle 43
                i+++G+G +G+++a    +++++vv+  +d+++v+++++e ++
  MMETSP1325-20131115|6540_1 42 ICVLGAGAFGTAMAMVAARNNHEVVIYARDQAVVDSINNEHIN 84
                78*****************5557*************9998765 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   6.6e-05     0.065      12      79 ..      39     105 ..      29     130 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 6.6e-05
                 --EEEEE----HHHHHGGG--TTT-E.EEE----HHHHHHHHHHH...T-EE---S-HHHHHHT-SEE CS
  PF01488.15  12 gkkvlviGAGemarlvakhLlekgvkkiviaNRtaekakeLaeelggeevealpleeleellaeadvv 79 
                 + k++v+GAG  ++++a + ++++ + +vi  R+++ ++ + +e+ + ++++ +++   ++ a  +v+
  MMETSP1325-20131115|6540_1  39 NIKICVLGAGAFGTAMAMVAARNNHE-VVIYARDQAVVDSINNEHINPKYKMETFTLPTNITATTNVA 105
                 6799**********999998887777.*****************977777777777666666666555 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0    0.0001     0.099       1      26 [.      44      69 ..      44     104 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.0001
   PF13450.1  1 IvGaGlsGlvaAylLakagkdvlvle 26
                ++GaG++G ++A  +a+++++v+++ 
  MMETSP1325-20131115|6540_1 44 VLGAGAFGTAMAMVAARNNHEVVIYA 69
                79**********************95 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.3e-05     0.062       9      80 ..      12      83 ..       4     128 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 6.3e-05
                TTCCCHHHCCCTT--.--GCG-B-.G..GGSEEE-B-------HHHHHHHH---EEEE--SS--...HHHH--- CS
  PF02826.14  9 rklkeadeevregewssekallgkel..sgktvGiiGlGrIGqavakrlkafgmkvlaydrskkkeeeeeelga 80
                 +l++a +e+++ ++    +l g++l  s+ +++++G+G+ G+a+a +++  + +v++y r +   ++ +++ +
  MMETSP1325-20131115|6540_1 12 DNLQHAMSELKSPKV--VTKLAGNNLteSNIKICVLGAGAFGTAMAMVAARNNHEVVIYARDQAVVDSINNEHI 83
                556666666666666..344445544005567899*************************99886664444433 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00018      0.18       1      49 [.      41      90 ..      41     115 .. 0.74
   2 ?   -1.2   0.0       2.5   2.4e+03      10      22 ..     286     299 ..     284     328 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00018
                EEEEE---HHHHHHHHHHHHTTSEEEEEESSSSSS.TTSSHHHHHHHHHH CS
  PF00070.22  1 rvvvvGGGyiGlElAaalaklgkkVtvierrdrll.raldeeiakilqkk 49
                +++v+G+G  G  +A ++a+ +++V +  r + +     +e i   ++++
  MMETSP1325-20131115|6540_1 41 KICVLGAGAFGTAMAMVAARNNHEVVIYARDQAVVdSINNEHINPKYKME 90
                699**********************9988888887444444466555555 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 2.5
                 HHHHHHHHHHH.TT CS
  PF00070.22  10 iGlElAaalak.lg 22 
                 +G+El++al++ l+
  MMETSP1325-20131115|6540_1 286 VGVELGGALKNpLA 299
                 89999999987555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       613  (0.0448362); expected 273.4 (0.02)
Passed bias filter:                      481  (0.0351814); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.83u 0.43s 00:00:01.26 Elapsed: 00:00:00.61
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|6543_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-11   42.1   9.7    1.7e-10   40.9   6.7    1.8  1  PF02466.14 Tim17/Tim22/Tim23/Pmp24 family
  ------ inclusion threshold ------
       0.27   11.3  12.7        3.8    7.6   0.5    3.2  3  PF10247.4  Reactive mitochondrial oxygen species modulator 1
        2.1    7.8  17.1       0.49    9.8   0.2    3.5  3  PF13441.1  YMGG-like Gly-zipper
        9.4    5.8  15.1        4.8    6.8   1.6    3.5  4  PF05433.10 Glycine zipper 2TM domain


Domain annotation for each model (and alignments):
>> PF02466.14  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   6.7   4.9e-14   1.7e-10      17     124 ..       6     164 ..       1     168 [. 0.70

  Alignments for each domain:
  == domain 1    score: 40.9 bits;  conditional E-value: 4.9e-14
  PF02466.14  17 GavyGlfmrsm.......ha............................................atklfrslplke..qlkavlramkqrspssaknfavvgaiYsgiecaleglrgkndllnsvaAGaltGavlarrg.gpqaaavgaag.faafsaaieal 124
                 Ga++G++++++        a                                            a+ ++ s+      + +av+ +m++    s   f+ + +i++g+ c +e +r+++d++ns+a+Ga++G + ++++  p+ ++ +a+g +a+ sa++ a+
  MMETSP1325-20131115|6543_1   6 GAIIGVAWGLVfdtfappGAalmdahvphgrsprgsqgprvaadpdaptgvdtkalkskvaggaAGSAEHSGWRYLlgKSRAVVSSMGR----SSLGFGLFLGIFNGVSCNFETIRQRKDWVNSFAGGAAAGTFAGLNTrDPRMIMYSALGtGAVTSAVFVAF 164
                 55555555544433344411444455555566677777777777777777777777777777754444444433336788999999**9....********************************************99889998888876255566666665 PP

>> PF10247.4  Reactive mitochondrial oxygen species modulator 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.2    0.0046        16      10      29 ..       2      21 ..       1      27 [. 0.90
   2 ?    7.6   0.5    0.0011       3.8      41      67 .]      85     111 ..      64     111 .. 0.78
   3 ?    5.5   0.5    0.0051        17      22      53 ..     129     160 ..     126     167 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0046
   PF10247.4 10 GfimGaaVGgafGllfGgya 29
                G++ Ga++G+a Gl+f ++a
  MMETSP1325-20131115|6543_1  2 GMARGAIIGVAWGLVFDTFA 21
                8889***********99986 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0011
   PF10247.4  41 lrtlgksvlgsaatFGffmsiGsviRc 67 
                  r + +s+  s+  FG+f++i  ++ c
  MMETSP1325-20131115|6543_1  85 SRAVVSSMGRSSLGFGLFLGIFNGVSC 111
                 46667788899999******9877766 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.0051
   PF10247.4  22 GllfGgyaalraglgprgllrtlgksvlgsaa 53 
                 G+  G++a l  + +++ + + lg  +++sa+
  MMETSP1325-20131115|6543_1 129 GAAAGTFAGLNTRDPRMIMYSALGTGAVTSAV 160
                 8889*********************9999996 PP

>> PF13441.1  YMGG-like Gly-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.2   0.00014      0.49       6      29 ..       2      26 ..       1      28 [. 0.85
   2 ?    2.2   0.3     0.033   1.1e+02      34      40 ..      66      72 ..      58      77 .. 0.59
   3 ?    3.1   3.3     0.018        62       6      22 ..     125     141 ..     121     161 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00014
                XXXXXXXXXXXXXXXXX.XXX---- CS
   PF13441.1  6 GAaiGAaaGAaiGaaaG.gggkGAa 29
                G a+GA++G a G +++  ++ GAa
  MMETSP1325-20131115|6543_1  2 GMARGAIIGVAWGLVFDtFAPPGAA 26
                899************9986777776 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.033
                ------- CS
   PF13441.1 34 aGalaGg 40
                aG++aG 
  MMETSP1325-20131115|6543_1 66 AGGAAGS 72
                2333332 PP

  == domain 3    score: 3.1 bits;  conditional E-value: 0.018
                 XXXXXXXXXXXXXXXXX CS
   PF13441.1   6 GAaiGAaaGAaiGaaaG 22 
                   a GAaaG  +G  + 
  MMETSP1325-20131115|6543_1 125 SFAGGAAAGTFAGLNTR 141
                 55888999988887665 PP

>> PF05433.10  Glycine zipper 2TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.3     0.095   3.2e+02      24      32 ..       4      12 ..       1      18 [. 0.57
   2 ?    4.5   0.1     0.007        24       8      16 ..      65      73 ..      58      81 .. 0.69
   3 ?    6.8   1.6    0.0014       4.8      24      38 ..     123     137 ..     116     141 .. 0.78
   4 ?    5.0   3.4    0.0051        17       4      25 ..     127     157 ..     125     163 .. 0.60

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.095
  PF05433.10 24 llgavvGAa 32
                ++ga++G a
  MMETSP1325-20131115|6543_1  4 ARGAIIGVA 12
                455555544 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.007
  PF05433.10  8 aaGavaGaa 16
                +aG++aG+a
  MMETSP1325-20131115|6543_1 65 VAGGAAGSA 73
                455555555 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0014
  PF05433.10  24 llgavvGAaaGalaG 38 
                 + + ++GAaaG++aG
  MMETSP1325-20131115|6543_1 123 VNSFAGGAAAGTFAG 137
                 566689999999999 PP

  == domain 4    score: 5.0 bits;  conditional E-value: 0.0051
  PF05433.10   4 liGAaaGavaGaaigg.........gggrll 25 
                 ++GAaaG  aG ++++         g+g+++
  MMETSP1325-20131115|6543_1 127 AGGAAAGTFAGLNTRDprmimysalGTGAVT 157
                 5788888888887777444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 901.24
//
Query:       MMETSP1325-20131115|6544_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 548.40
//
Query:       MMETSP1325-20131115|6546_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.4    7.3   7.5        3.9    6.6   0.6    2.5  2  PF00649.13 Copper fist DNA binding domain


Domain annotation for each model (and alignments):
>> PF00649.13  Copper fist DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.7   0.00098        13      19      32 ..      16      29 ..      13      37 .. 0.82
   2 ?    6.6   0.6   0.00029       3.9      13      28 ..      31      46 ..      28      53 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.00098
  PF00649.13 19 RsstCkHtdrplvk 32
                R s C+H  r  + 
  MMETSP1325-20131115|6546_1 16 RPSGCTHRSRSTTA 29
                7899***9998765 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.00029
  PF00649.13 13 aCiRGHRsstCkHtdr 28
                +Ci    ss+C Ht +
  MMETSP1325-20131115|6546_1 31 NCISMPMSSNCSHTRT 46
                67777789*****943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 289.56
//
Query:       MMETSP1325-20131115|6547_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.66
# Mc/sec: 272.31
//
Query:       MMETSP1325-20131115|6545_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1    8.6   4.4        2.2    7.6   2.0    1.9  2  PF07731.9 Multicopper oxidase


Domain annotation for each model (and alignments):
>> PF07731.9  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.0   0.00016       2.2     117     133 ..       2      18 ..       1      22 [. 0.83
   2 ?    0.3   0.0     0.029     4e+02     106     115 ..      66      75 ..      53     102 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00016
                 EES-HHHHHTT-EEEEE CS
   PF07731.9 117 HCHilwHlsaGlalqfv 133
                 HCHi  H++aG+   ++
  MMETSP1325-20131115|6545_1   2 HCHIYNHETAGMKEMVA 18 
                 ************75555 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.029
                 EE------EE CS
   PF07731.9 106 fkadnpGvWl 115
                  +adn+ +W+
  MMETSP1325-20131115|6545_1  66 ATADNTWPWM 75 
                 4567777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 446.22
//
Query:       MMETSP1325-20131115|6549_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0022   17.3  19.3      0.031   13.7   2.3    3.7  3  PF07699.8 GCC2 and GCC3
  ------ inclusion threshold ------
       0.47    9.5  12.3       0.94    8.6   8.5    1.7  1  PF03856.8 Beta-glucosidase (SUN family)
        1.2    9.5   4.1        2.5    8.4   0.8    2.6  2  PF13842.1 DDE_Tnp_1-like zinc-ribbon


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   2.2    0.0017       7.6      14      42 ..      27      64 ..      25      69 .. 0.54
   2 !    6.2   0.1    0.0014       6.6      10      43 ..      70     104 ..      64     108 .. 0.81
   3 !   13.7   2.3   6.8e-06     0.031       6      41 ..     111     145 ..     106     149 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0017
   PF07699.8 14 CprGtY......kneegqk....kCiaCppgttTskkgs 42
                Cp+G +      k ++g+     +C++C+ g++ +  g+
  MMETSP1325-20131115|6549_1 27 CPKGRFgvcatfK-NGGYScemdSCESCGIGKYGAMDGA 64
                7777665555532.3333223337777777776666665 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0014
   PF07699.8  10 kCepCprGtYkneegqkkCiaCppg.ttTskkgsk 43 
                  C    +G+Y n++g+ + +aC +g  +T+ +g k
  MMETSP1325-20131115|6549_1  70 GCVFADEGYYVNTSGSATQLACTSGsYVTDTPGDK 104
                 5777789**********999999997778888765 PP

  == domain 3    score: 13.7 bits;  conditional E-value: 6.8e-06
   PF07699.8   6 kgnkkCepCprGtYkneegqkkCiaCppgttTskkg 41 
                 +g   Ce+Cp+G   +e ++  C +C +g+ Ts++g
  MMETSP1325-20131115|6549_1 111 QGGVACELCPQGKVESEFSKAYCDSCEAGK-TSSEG 145
                 56679************************6.66666 PP

>> PF03856.8  Beta-glucosidase (SUN family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   8.5   0.00021      0.94      42      97 ..      82     141 ..      19     152 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00021
   PF03856.8  42 kegsyCsyaCkpgqsktqwPstqgstgesvGGlyCk...ngkleksnkd.skklCeegvg 97 
                 ++gs    aC++g   t+ P ++  +g s+GG+ C+   +gk+e  +++   + Ce+g+ 
  MMETSP1325-20131115|6549_1  82 TSGSATQLACTSGSYVTDTPGDKDGSGVSQGGVACElcpQGKVESEFSKaYCDSCEAGKT 141
                 67899999*************************998777899998888734455566555 PP

>> PF13842.1  DDE_Tnp_1-like zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.14   6.2e+02      18      24 ..      49      55 ..      48      58 .. 0.81
   2 ?    8.4   0.8   0.00056       2.5       3      23 ..     116     137 ..     114     151 .. 0.76

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.14
   PF13842.1 18 sCkkCpv 24
                sC++C++
  MMETSP1325-20131115|6549_1 49 SCESCGI 55
                7****86 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00056
   PF13842.1   3 CkvCkkknprke.trysCkkCp 23 
                 C  C++ ++  e ++++C +C+
  MMETSP1325-20131115|6549_1 116 CELCPQGKVESEfSKAYCDSCE 137
                 999***5555555********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 855.84
//
Query:       MMETSP1325-20131115|6548_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|6550_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 713.81
//
Query:       MMETSP1325-20131115|6551_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-10   39.2   0.0    6.5e-10   38.8   0.0    1.2  1  PF06974.8 Protein of unknown function (DUF1298)


Domain annotation for each model (and alignments):
>> PF06974.8  Protein of unknown function (DUF1298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   4.7e-14   6.5e-10       5     151 ..      80     226 ..      76     228 .. 0.89

  Alignments for each domain:
  == domain 1    score: 38.8 bits;  conditional E-value: 4.7e-14
   PF06974.8   5 crWGnligvvllPlsikleddpleyvrkakaiidrkkkslealltyviiklvlkvfGikvaaalvkrivsnttltfsnvvGPkEeisfvghpisyiaass.yghphaltihlqsYvnkiiislavdetvipDphklcddleeslklik 151
                  +  n +g ++l l +   + pl  ++  k+ +d  k   +  +t+ +i+l+ k++     + l++   s++tl+fsnv+G   e +f g ++s i   + +    +l + ++s+ + +   l  d++++ Dp+ +   l+e  ++++
  MMETSP1325-20131115|6551_1  80 HQLNNRVGALFLKLPVGA-ATPLRRLKLCKQRMDMLKLGPSVPVTMLFIRLTTKLLNNWLCNWLQQSYSSKATLIFSNVMGSPTEATFLGARVSGIMGFVpLPGHMSLGVTVTSFNGSMRFGLVADPNALTDPELFGRLLVEEYNILR 226
                 566799999999999976.56*************************************************************************99887625556689*************************988887777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.46
# Mc/sec: 1359.67
//
Query:       MMETSP1325-20131115|6553_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1363  (0.0996928); expected 273.4 (0.02)
Passed bias filter:                      741  (0.0541984); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.46s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|6555_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 1140.87
//
Query:       MMETSP1325-20131115|6552_1  [L=437]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.25   11.1   3.2       0.58    9.9   0.1    2.7  3  PF13858.1 Protein of unknown function (DUF4199)


Domain annotation for each model (and alignments):
>> PF13858.1  Protein of unknown function (DUF4199)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.026   3.5e+02     127     159 ..      34      65 ..       6      68 .. 0.78
   2 ?    9.9   0.1   4.2e-05      0.58      32      95 ..     147     208 ..     126     273 .. 0.84
   3 ?   -2.6   0.1       0.3   4.1e+03      78      92 ..     352     366 ..     347     377 .. 0.49

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.026
   PF13858.1 127 emkeklspisllfqgiignlifglilsliiali 159
                 +++e ++  s ++ +i++++++ +++sl + l+
  MMETSP1325-20131115|6552_1  34 TYQEDYAEGSGFL-SIAESILWCFVMSLSLKLF 65 
                 5666666677777.9999999999999987766 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 4.2e-05
   PF13858.1  32 llgllnllltlaviylaiksyrkkalggvisfkqafkfgllisliaallstlfqyiylnfidpd 95 
                 l+  +  +l+  ++y++  ++ + + + ++sf  a +f+ ++  +aa + t ++++  ++++ +
  MMETSP1325-20131115|6552_1 147 LI--FPTILAGTFVYIGSLQFENDSGQMEFSFPWAKTFTAVMLTVAAGVRTGSMFVAAYYLEKA 208
                 33..4577888888********999999*****************************9998764 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 0.3
   PF13858.1  78 allstlfqyiylnfi 92 
                  l+st++ +i+ ++ 
  MMETSP1325-20131115|6552_1 352 YLVSTALFIIFGYYC 366
                 344444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       460  (0.0336454); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.43
# Mc/sec: 2435.37
//
Query:       MMETSP1325-20131115|6554_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       584  (0.042715); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.59
# Mc/sec: 792.02
//
Query:       MMETSP1325-20131115|6556_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 415.08
//
Query:       MMETSP1325-20131115|6557_1  [L=435]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-22   77.2   0.2    1.6e-21   76.4   0.2    1.4  1  PF12806.2  Acetyl-CoA dehydrogenase C-terminal like
      1e-21   77.4   2.6    4.7e-21   75.3   0.4    2.7  2  PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain
     0.0021   18.2   0.0     0.0049   17.0   0.0    1.6  1  PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF12806.2  Acetyl-CoA dehydrogenase C-terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.2   3.5e-25   1.6e-21      18     127 ..     272     384 ..     256     386 .. 0.91

  Alignments for each domain:
  == domain 1    score: 76.4 bits;  conditional E-value: 3.5e-25
   PF12806.2  18 aealaalaerLeaalealeeatkallenaakdpeevlaaatpyLelfGdvvlGwlllrqalvakaalaea...daafyqgKiatarFfaanlLpraaalaaaieagddslmel 127
                 + al  +a+ L +   ++ ++t  ++ +a++++e + + +++yL++ G+v+l+  +l++ +va+++l+e+   +++fy++Ki+t  F +++lLpr++++ a + +  +s+ ++
  MMETSP1325-20131115|6557_1 272 TSALGTHARSLMRHTMEWHAMTYMIGFEAKSNKEWISSTSVDYLMYSGYVTLAAHWLQMEAVANQKLKEGgteEEEFYKAKIQTSAFMFDYLLPRTRGHKANMWTPIESITDM 384
                 457999*************************************************************998888899***********************99886666666655 PP

>> PF00441.19  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.3   0.4     1e-24   4.7e-21       1     144 [.      69     240 ..      69     247 .. 0.91
   2 ?   -1.9   0.0      0.62   2.8e+03      62      98 ..     321     358 ..     278     362 .. 0.64

  Alignments for each domain:
  == domain 1    score: 75.3 bits;  conditional E-value: 1e-24
                 ---...-HHHHHHHHHH--------HHHHHHHHHHHHHH-............------GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTS-................HHHHHHHHHHHHHHHHHHHHHHHHH---GGGBTTSSHHHHHHHHTTTTT-------HHHH CS
  PF00441.19   1 gkGfavametlnheRlliaaaalglarraleealeyakqr............kafgkplidfqlireklaemaaeleaarllvyraaealdagkpd................saeaslaKllaselaqevadeamqllGgrGyaeeyplerlyrdarvlrigeGtseiqrni 144
                 ++G++ + + +n +R+ +a++ +++a+ a++++l yak+r            +    p+i ++++r +l   ++  e  r++vy++a+++d + ++                +  ++++K + +e+  e+ad+ +q++Gg+Gy+++++ e+ yrd+r++ ++eGt++iq + 
  MMETSP1325-20131115|6557_1  69 NRGLNHMFTFINTSRVGTAVQGVAAAELAFQNSLWYAKERgsmralsgtkqpEKVADPIIYHPSVRTMLLTQKCISEGGRSMVYECAKMADYMMRAevngdhaeahrlderlGFLTPILKGFLTEAGKEAADLGIQVYGGHGYIKDNKAEQVYRDVRIAPVWEGTTQIQALD 240
                 79999***********************************888888877654444579******************************777766666677777999999***********************************************************9765 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.62
                 HHHHHHHHHHHHHHH.HHC-TTS-HHHHHHHHHHHHHH CS
  PF00441.19  62 aeleaarllvyraae.aldagkpdsaeaslaKllasel 98 
                 + l+a  l  + +a  +l++g++++ e   aK+++s +
  MMETSP1325-20131115|6557_1 321 VTLAAHWLQMEAVANqKLKEGGTEEEEFYKAKIQTSAF 358
                 44444444444444446667777788888888877765 PP

>> PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.1e-06    0.0049      86     131 ..     181     232 ..     150     235 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.1e-06
                 H......HHHHHHHHHHHHHHHHTT---GGGBTT-HHHHHHHHHHH----TT CS
   PF08028.6  86 d......aalavelavaavdrlfeaaGgsalfkesplqRfwRDahaaaaHal 131
                        + + +e+  +a+d  +++ Gg+++ k+++ +  +RD+++a + ++
  MMETSP1325-20131115|6557_1 181 GfltpilKGFLTEAGKEAADLGIQVYGGHGYIKDNKAEQVYRDVRIAPVWEG 232
                 24445668999**********************************9877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.39s 00:00:01.14 Elapsed: 00:00:00.54
# Mc/sec: 1930.40
//
Query:       MMETSP1325-20131115|6559_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 465.18
//
Query:       MMETSP1325-20131115|6558_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 466.66
//
Query:       MMETSP1325-20131115|6561_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|6562_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.58    9.1   5.3       0.61    9.1   3.7    1.0  1  PF04583.7  Baculoviridae p74 conserved region
        2.5    8.1   9.1        3.3    7.7   6.3    1.2  1  PF12666.2  PrgI family protein


Domain annotation for each model (and alignments):
>> PF04583.7  Baculoviridae p74 conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.7   8.9e-05      0.61      84     130 ..      15      62 ..       2      76 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 8.9e-05
   PF04583.7  84 riaiktvsavakal.vriaikaaSvvgivliiltiadlvLmlwDPfGy 130
                  ++++ v++ a +  + ++++aa+vv +v ++++++ ++L+   P+G 
  MMETSP1325-20131115|6562_1  15 AVVVEAVAVAAAVAvAVAVAAAAAVVVVVAVVFVVVCVLLAWLRPLGL 62 
                 444555554444330334667788888889999999999998899996 PP

>> PF12666.2  PrgI family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   6.3   0.00049       3.3      28      72 ..      20      64 ..       8      67 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00049
   PF12666.2 28 avlvgvgvflllrlylgtsialilmilvvlpfallafykkkglkf 72
                av+v+++v++++    +  + +++++++v+ ++lla+ ++ gl++
  MMETSP1325-20131115|6562_1 20 AVAVAAAVAVAVAVAAAAAVVVVVAVVFVVVCVLLAWLRPLGLPL 64
                5555555555555555678889999999999*********99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1783  (0.130413); expected 273.4 (0.02)
Passed bias filter:                      997  (0.0729228); expected 273.4 (0.02)
Passed Vit filter:                       196  (0.0143359); expected 13.7 (0.001)
Passed Fwd filter:                        29  (0.00212112); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.47s 00:00:01.01 Elapsed: 00:00:00.53
# Mc/sec: 357.19
//
Query:       MMETSP1325-20131115|6564_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        93  (0.00680222); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|6567_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.29s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|6563_1  [L=351]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00024   20.6   0.2    0.00066   19.2   0.1    1.8  1  PF00085.15 Thioredoxin


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1   4.9e-08   0.00066       5      82 ..     185     260 ..     181     271 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 4.9e-08
                 SSHHHHHHHHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTT--SSSEEEEESSS CS
  PF00085.15   5 ltkenfeeevaksdklvlvefyApwCGhCkalaPeyeklaeelkekvvlakvdvdenkdlaseygvegiPtlklfkng 82 
                 +++++f   v+  +k  + +fy +    Ck +  ++++la  +  + +++k+++++++  +++++++ +Pt++ f +g
  MMETSP1325-20131115|6563_1 185 IVQDEFLPSVMG-SKRTVCHFYHKDFERCKIMDMHLANLAAVHV-ETKFVKINAEKCPFFTHKLDIQILPTVVCFFEG 260
                 566777777777.899999**********************999.9**************************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       895  (0.0654623); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.39s 00:00:01.10 Elapsed: 00:00:00.60
# Mc/sec: 1401.87
//
Query:       MMETSP1325-20131115|6569_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 723.70
//
Query:       MMETSP1325-20131115|6571_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        59  (0.00431539); expected 273.4 (0.02)
Passed bias filter:                       57  (0.0041691); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.21u 0.47s 00:00:00.68 Elapsed: 00:00:00.59
# Mc/sec: 134.03
//
Query:       MMETSP1325-20131115|6570_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-16   59.7   0.0    1.7e-16   59.2   0.0    1.2  1  PF05186.8 Dpy-30 motif


Domain annotation for each model (and alignments):
>> PF05186.8  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.0   1.3e-20   1.7e-16       3      40 ..      60      97 ..      59      99 .. 0.97

  Alignments for each domain:
  == domain 1    score: 59.2 bits;  conditional E-value: 1.3e-20
   PF05186.8  3 rkYLnktvaPiLlqGLtelakeRPeDPiefLaeyLlkn 40
                r+YL+++v+P+L++G+ e++k++P+DPi+fL +yL+++
  MMETSP1325-20131115|6570_1 60 RDYLMQNVMPTLTHGMLEVIKSKPKDPIDFLSNYLIEQ 97
                9**********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.42s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 694.45
//
Query:       MMETSP1325-20131115|6572_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.078   12.7   0.0      0.082   12.7   0.0    1.0  1  PF00106.20 short chain dehydrogenase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     6e-06     0.082      38      90 ..      12      61 ..       2      68 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 6e-06
                HHHHHHHHHHHH---EEEEEE--TTSHHHHHHHHHHHHHH----SEEEEE--- CS
  PF00106.20 38 pgaaeliaelealgaevtvvacDvadrdalaallaeirkalgpldgvvhnagv 90
                p+    +ael+ +g + +++ +D ad   la+ll +++   +p  + +h ag+
  MMETSP1325-20131115|6572_1 12 PESLNRVAELTGKGDHLKFFNLDTADGPGLAHLLGAMP--SPP-ILCIHFAGL 61
                5555567******************************9..444.455577775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       100  (0.00731422); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 330.70
//
Query:       MMETSP1325-20131115|6573_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.19   10.3   1.3       0.21   10.2   0.9    1.1  1  PF12031.3  Domain of unknown function (DUF3518)


Domain annotation for each model (and alignments):
>> PF12031.3  Domain of unknown function (DUF3518)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.9   1.6e-05      0.21     122     197 ..      29     106 ..      26     117 .] 0.72

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 1.6e-05
   PF12031.3 122 saeaqdPfptagpnsvlspqrlvlealcklsild..anvdlilatppfsrleklfatlvrylgerknqvlrelavall 197
                 sa  +d ++ a    + s+   v  ++ k si    a + l +++p++s+l +l  t+v  l+   +   r +av   
  MMETSP1325-20131115|6573_1  29 SASQHDDVTVAPRVQAASSVSSVSGCVVKRSISTxrAAAALFVSSPAYSQLRHLLCTFVAALTAAAHAAARAIAVIAA 106
                 5555555544444455566677888999988875226789***************************99999987543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       912  (0.0667057); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 596.54
//
Query:       MMETSP1325-20131115|6575_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|6576_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        76  (0.00555881); expected 273.4 (0.02)
Passed bias filter:                       74  (0.00541252); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 185.38
//
Query:       MMETSP1325-20131115|6574_1  [L=459]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.34s 00:00:01.11 Elapsed: 00:00:00.52
# Mc/sec: 2115.25
//
Query:       MMETSP1325-20131115|6578_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 756.18
//
Query:       MMETSP1325-20131115|6579_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.16   11.4   0.3       0.16   11.4   0.2    1.4  2  PF02625.11 XdhC and CoxI family
        3.4    8.1   7.6        4.5    7.7   5.3    1.3  1  PF03964.10 Chorion family 2


Domain annotation for each model (and alignments):
>> PF02625.11  XdhC and CoxI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   2.4e-05      0.16      22      49 ..       3      29 ..       1      34 [. 0.90
   2 ?   -3.6   0.3       1.2     8e+03      53      53 ..      46      46 ..      41      51 .. 0.39

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.4e-05
                -SS----EEEEE----EE-------HHH CS
  PF02625.11 22 aprkaGakmlvsadgrivGtiGGGclEa 49
                ++ +aG +m+v a+g   G  G G ++a
  MMETSP1325-20131115|6579_1  3 TYGEAGIQMVVMANG-AMGANGAGRIDA 29
                899************.****99999987 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 1.2
                H CS
  PF02625.11 53 e 53
                +
  MMETSP1325-20131115|6579_1 46 A 46
                1 PP

>> PF03964.10  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.3   0.00066       4.5      29      60 ..      18      52 .]       3      52 .] 0.57

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00066
  PF03964.10 29 argnsgygrs...gslvssssdssAaaaAasalaa 60
                a g +g gr      ++s++ d  AaaaAa+a+aa
  MMETSP1325-20131115|6579_1 18 AMGANGAGRIdavAKSSSIDPDDPAAAAAAAAAAA 52
                45556666656565556666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 265.13
//
Query:       MMETSP1325-20131115|6581_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00065   19.1   0.8      0.025   14.0   0.1    2.4  3  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.014   15.2   0.1        2.2    8.5   0.0    3.3  4  PF13516.1  Leucine Rich repeat
      0.042   13.4   2.1        0.2   11.2   0.5    2.5  2  PF13855.1  Leucine rich repeat
      0.079   12.9   0.5          2    8.6   0.0    3.0  3  PF00560.28 Leucine Rich Repeat
        1.6    9.1   5.4        9.3    6.8   0.1    3.4  4  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00019      0.53      11      37 ..      33      62 ..      33      73 .. 0.70
   2 !   14.0   0.1   9.1e-06     0.025       1      35 [.      49      92 ..      49      97 .. 0.77
   3 ?   -3.3   0.1       2.4   6.6e+03       3       8 ..     112     117 ..     111     118 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00019
   PF12799.2 11 NnIkdlppe...lanLpnLktLnLsnNpis 37
                Nn+ +l+ +      Lp L  L+Ls+N + 
  MMETSP1325-20131115|6581_1 33 NNLGQLGTHlmhMPFLPHLVKLDLSRNLLR 62
                55666665522234589**********885 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 9.1e-06
   PF12799.2  1 tnLevLdLsnN........nIkd.lppel.anLpnLktLnLsnNp 35
                + L +LdLs+N         I+d  ++ + +++p L+tL L+ Np
  MMETSP1325-20131115|6581_1 49 PHLVKLDLSRNllrstdrgEIEDfFEA-IgSKMPALQTLLLDENP 92
                57999******5555555555554445.9779***********98 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 2.4
   PF12799.2   3 LevLdL 8  
                 L+vL L
  MMETSP1325-20131115|6581_1 112 LRVLQL 117
                 777766 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.85   2.3e+03      12      19 ..      33      40 ..      24      44 .. 0.80
   2 ?    8.5   0.0   0.00079       2.2       1      14 [.      48      61 ..      48      77 .. 0.87
   3 ?    2.7   0.0      0.06   1.6e+02       2      19 ..      81      99 ..      80     105 .. 0.84
   4 ?   -2.3   0.0       2.5   6.8e+03       3      10 ..     111     118 ..     110     120 .. 0.76

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.85
   PF13516.1 12 NqigdeGl 19
                N++g+ G 
  MMETSP1325-20131115|6581_1 33 NNLGQLGT 40
                89998885 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00079
   PF13516.1  1 lknLtsLdLsnNqi 14
                l++L  LdLs+N +
  MMETSP1325-20131115|6581_1 48 LPHLVKLDLSRNLL 61
                79**********87 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.06
   PF13516.1  2 knLtsLdLsnNq.igdeGl 19
                + L++L L  N+ +g+ G+
  MMETSP1325-20131115|6581_1 81 PALQTLLLDENPeFGSSGV 99
                779********98888776 PP

  == domain 4    score: -2.3 bits;  conditional E-value: 2.5
   PF13516.1   3 nLtsLdLs 10 
                 +L++L+L 
  MMETSP1325-20131115|6581_1 111 SLRVLQLR 118
                 68999885 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.5   7.5e-05       0.2      13      59 ..      35      91 ..      29      92 .. 0.64
   2 ?   -2.1   0.0       1.1   3.1e+03       2       8 ..     111     117 ..     107     120 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 7.5e-05
   PF13855.1 13 lkvipdgaFk..glsnLkvLdLsgnnlksispea........fkgLpsLreLnLsgN 59
                l  ++++  +   l++L +LdLs+n l s +++          +++p+L+ L L+ N
  MMETSP1325-20131115|6581_1 35 LGQLGTHLMHmpFLPHLVKLDLSRNLLRSTDRGEiedffeaiGSKMPALQTLLLDEN 91
                666665555533469999999999999877665445554444567777777777665 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.1
   PF13855.1   2 nLkeLdL 8  
                 +L++L+L
  MMETSP1325-20131115|6581_1 111 SLRVLQL 117
                 3444444 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00073         2       1      15 [.      50      69 ..      50      78 .. 0.75
   2 ?    0.6   0.0      0.31   8.6e+02       2      12 ..      83      94 ..      82     108 .. 0.80
   3 ?   -1.3   0.1       1.3   3.5e+03       1       8 [.     111     118 ..     111     120 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00073
                TESEEEETSSBCBC.....H CS
  PF00560.28  1 nLeeLdLsgNnlts.....l 15
                +L +LdLs+N l s     +
  MMETSP1325-20131115|6581_1 50 HLVKLDLSRNLLRStdrgeI 69
                699*******8885455554 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.31
                ESEEEETSS.BC CS
  PF00560.28  2 LeeLdLsgN.nl 12
                L++L L+ N  +
  MMETSP1325-20131115|6581_1 83 LQTLLLDENpEF 94
                999999999666 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 1.3
                 TESEEEET CS
  PF00560.28   1 nLeeLdLs 8  
                 +L++L L+
  MMETSP1325-20131115|6581_1 111 SLRVLQLR 118
                 69999997 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0         5   1.4e+04      11      16 ..      33      38 ..      33      39 .. 0.63
   2 ?    6.8   0.1    0.0034       9.3       1      13 [.      49      61 ..      49      66 .. 0.87
   3 ?    0.3   0.0       0.5   1.4e+03       1      12 [.      81      92 ..      81      97 .. 0.80
   4 ?    2.3   0.1       0.1   2.8e+02       1      11 [.     110     120 ..     110     121 .] 0.85

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 5
   PF13504.1 11 nrLtsL 16
                n+L +L
  MMETSP1325-20131115|6581_1 33 NNLGQL 38
                667666 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0034
   PF13504.1  1 pnLkeLdLsgnrL 13
                p+L +LdLs+n L
  MMETSP1325-20131115|6581_1 49 PHLVKLDLSRNLL 61
                79********966 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.5
   PF13504.1  1 pnLkeLdLsgnr 12
                p L++L L  n+
  MMETSP1325-20131115|6581_1 81 PALQTLLLDENP 92
                67999*999886 PP

  == domain 4    score: 2.3 bits;  conditional E-value: 0.1
   PF13504.1   1 pnLkeLdLsgn 11 
                 ++L++L L+ +
  MMETSP1325-20131115|6581_1 110 GSLRVLQLRLC 120
                 58*****9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 604.08
//
Query:       MMETSP1325-20131115|6583_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.5   1.2       0.12   11.4   0.8    1.1  1  PF12072.3 Domain of unknown function (DUF3552)


Domain annotation for each model (and alignments):
>> PF12072.3  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.8   8.6e-06      0.12      74     127 ..       5      58 ..       1      71 [. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8.6e-06
   PF12072.3  74 kerrkelqrqEkRllqkeetLdrkeeslekkeekleekekelkqkeqsleekee 127
                  e+  ++++ ++R +   e L+  ++ le+ke +l eke  l+ +e++l + e+
  MMETSP1325-20131115|6583_1   5 AEQALHVTNFQERAQSLIEGLSDMQTLLEEKEFQLWEKEGLLEYQEERLMNSED 58 
                 567778899999999999*************************99999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       481  (0.0351814); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 323.95
//
Query:       MMETSP1325-20131115|6584_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 330.70
//
Query:       MMETSP1325-20131115|6587_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 469.07
//
Query:       MMETSP1325-20131115|6589_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|6591_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   14.1   1.6      0.036   13.4   1.1    1.2  1  PF06842.7 Protein of unknown function (DUF1242)


Domain annotation for each model (and alignments):
>> PF06842.7  Protein of unknown function (DUF1242)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.1   2.7e-06     0.036       9      18 ..      46      55 ..      46      56 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.7e-06
   PF06842.7  9 ICTCtYirql 18
                ICTC+Y+r++
  MMETSP1325-20131115|6591_1 46 ICTCAYARRK 55
                9*******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 322.77
//
Query:       MMETSP1325-20131115|6586_1  [L=371]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-17   61.7   7.9    6.4e-17   60.9   5.5    1.5  1  PF13639.1  Ring finger domain
    1.7e-13   50.0   7.2    2.7e-13   49.3   5.0    1.3  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    7.6e-11   41.3   5.4    7.6e-11   41.3   3.8    1.6  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    1.5e-10   40.3   8.3    2.5e-10   39.7   5.8    1.3  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    7.2e-08   32.3   2.8    1.8e-07   31.0   2.0    1.7  1  PF12678.2  RING-H2 zinc finger
    1.9e-05   24.0   2.5    3.6e-05   23.1   1.7    1.4  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    7.5e-05   22.3   1.0    0.00014   21.4   0.7    1.4  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
      0.004   16.7   3.1     0.0088   15.7   2.1    1.5  1  PF07191.7  Protein of unknown function (DUF1407)
  ------ inclusion threshold ------
      0.019   14.3   2.6      0.034   13.5   1.8    1.3  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
       0.03   13.7   9.2       0.15   11.4   2.6    2.4  2  PF14447.1  Prokaryotic RING finger family 4
       0.16   11.8   7.2        1.2    9.0   5.0    2.2  1  PF11793.3  FANCL C-terminal domain
       0.32   10.3   8.0        1.2    8.5   5.5    1.9  1  PF03854.9  P-11 zinc finger
        1.7    7.8   6.7        1.1    8.4   0.1    2.8  3  PF13248.1  zinc-ribbon domain
        4.2    7.3   8.5          4    7.4   0.1    2.8  2  PF14369.1  zinc-finger
        6.5    6.0   8.1         30    3.8   3.2    2.6  2  PF08271.7  TFIIB zinc-binding


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   5.5     7e-20   6.4e-17       2      45 ..     288     331 ..     287     332 .. 0.97

  Alignments for each domain:
  == domain 1    score: 60.9 bits;  conditional E-value: 7e-20
   PF13639.1   2 eCaiCldelsegeevvrlpCgHvfHeeCldewlrssnsCPlCrk 45 
                 +C+iCl+e++e+++v+ lpC+H+f++ C+dewl+ +++CP+Cr+
  MMETSP1325-20131115|6586_1 288 TCPICLSEFDEEDDVRMLPCKHYFCKACIDEWLSVNSTCPNCRT 331
                 7******************************************8 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   5.0   2.9e-16   2.7e-13       2      46 .]     286     331 ..     285     331 .. 0.92

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 2.9e-16
   PF13923.1   2 rfsCpiCleel..enpviltpCgHlyCkkCieqwlekskkkCPiCrn 46 
                 + +CpiCl+e+  e+ v ++pC H++Ck Ci++wl+  +++CP Cr+
  MMETSP1325-20131115|6586_1 286 DMTCPICLSEFdeEDDVRMLPCKHYFCKACIDEWLSV-NSTCPNCRT 331
                 579********5555999*******************.*******96 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   3.8   8.4e-14   7.6e-11       2      48 ..     286     334 ..     285     336 .. 0.90

  Alignments for each domain:
  == domain 1    score: 41.3 bits;  conditional E-value: 8.4e-14
   PF13920.1   2 kktCvvCler...eadvlllpCgHlclCeeCaerllkrkkkCpiCrspie 48 
                 + tC++Cl++   e dv +lpC+H  +C++C +++l+ + +Cp Cr++i 
  MMETSP1325-20131115|6586_1 286 DMTCPICLSEfdeEDDVRMLPCKHY-FCKACIDEWLSVNSTCPNCRTNIL 334
                 579*****96444889*********.*********************996 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   5.8   2.7e-13   2.5e-10       1      41 []     289     329 ..     289     329 .. 0.97

  Alignments for each domain:
  == domain 1    score: 39.7 bits;  conditional E-value: 2.7e-13
                 -TTTSSS-SSEE...BSCTS-EE-CHHHHHHHCST-----TTT CS
  PF00097.20   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCPlC 41 
                 CpiCl+e+ e++  ++l+CkH fC++Ci+++l+   + +CP+C
  MMETSP1325-20131115|6586_1 289 CPICLSEFDEEDdvRMLPCKHYFCKACIDEWLS--VNSTCPNC 329
                 ***********999*******************..8888**** PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   2.0     2e-10   1.8e-07      11      75 .]     277     330 ..     269     330 .. 0.75

  Alignments for each domain:
  == domain 1    score: 31.0 bits;  conditional E-value: 2e-10
   PF12678.2  11 alwkwdisedn.CaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrktCPlcr 75 
                 a  +   s+d  C iC +e+          +++d++ ++   C+H F + Ci +Wl  ++tCP cr
  MMETSP1325-20131115|6586_1 277 AEGASASSVDMtCPICLSEF----------DEEDDVRML--PCKHYFCKACIDEWLSVNSTCPNCR 330
                 54444445564499999999..........323556665..5***********************8 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   1.7     4e-08   3.6e-05      11      47 ..     287     323 ..     280     331 .. 0.85

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 4e-08
                 -B-TTT-S.-SS....EEEES---EEEHHHHHHHHHHH CS
   PF13445.1  11 faCpiske.qsteqnpPvvLpCGhvisrealeklakgg 47 
                  +Cpi+   + +e+ +  +LpC h +++ ++ ++++ +
  MMETSP1325-20131115|6586_1 287 MTCPICLSeF-DEEDDVRMLPCKHYFCKACIDEWLSVN 323
                 68******88.8899988****************9843 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.7   1.6e-07   0.00014      26      81 ..     280     333 ..     268     337 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 1.6e-07
   PF12861.2  26 icrvsfdGtcpsckfpGddcplv.lGkckhnfhlhcilkwletetskglcpmcrqtf 81 
                     s d tcp c +  d+   v +  ckh f + ci +wl+    ++ cp cr ++
  MMETSP1325-20131115|6586_1 280 ASASSVDMTCPICLSEFDEEDDVrMLPCKHYFCKACIDEWLSV---NSTCPNCRTNI 333
                 55668899******9998876551556**************76...56799999865 PP

>> PF07191.7  Protein of unknown function (DUF1407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   2.1   9.6e-06    0.0088       2      44 ..     287     337 ..     286     345 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 9.6e-06
   PF07191.7   2 lkCPkCqseleskg.......eeahCeaCqkd.fkkealCpdCeqeLekLk 44 
                 ++CP C se+++++       ++++C+aC  + ++++ +Cp+C++++    
  MMETSP1325-20131115|6586_1 287 MTCPICLSEFDEEDdvrmlpcKHYFCKACIDEwLSVNSTCPNCRTNILASD 337
                 68*********99989999999*******65527999******99876555 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.8   3.7e-05     0.034       8      56 ..     283     329 ..     279     330 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.7e-05
                 XXXX-B-TTT-SB-..SSEEEES----EEEHHHHHHHHTTT--B------- CS
   PF11789.3   8 erislkCpltlkpf..kePvtskkCnHvFEkeaIlkmlkrkkkvkCPvaGC 56 
                 + ++++Cp+ l++f  ++ v+   C+H F k  I + l  + +  CP   C
  MMETSP1325-20131115|6586_1 283 SSVDMTCPICLSEFdeEDDVRMLPCKHYFCKACIDEWL--SVNSTCPN--C 329
                 6789**********3335677779**************..66778987..5 PP

>> PF14447.1  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.016        15      42      54 ..     289     301 ..     287     302 .. 0.88
   2 ?   11.4   2.6   0.00017      0.15      21      49 ..     303     333 ..     301     338 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.016
   PF14447.1  42 CPfCgtrletdsp 54 
                 CP+C   ++++++
  MMETSP1325-20131115|6586_1 289 CPICLSEFDEEDD 301
                 ********99886 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.00017
   PF14447.1  21 vllpCgHlvpdetFd..lerYsgCPfCgtrl 49 
                 ++lpC H+ ++++ d  l+  s CP C t +
  MMETSP1325-20131115|6586_1 303 RMLPCKHYFCKACIDewLSVNSTCPNCRTNI 333
                 579************666789******9987 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   5.0    0.0013       1.2       2      46 ..     286     325 ..     285     338 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0013
                 --S-SSS--SS--------B--S-TT----B-SGGGHHHHHHHH- CS
   PF11793.3   2 eveCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrslke 46 
                 ++ C+iC++++++++ v    C        f +aC+ eWl  +++
  MMETSP1325-20131115|6586_1 286 DMTCPICLSEFDEEDDVRMLPCKHY-----FCKACIDEWLSVNST 325
                 589*************999987665.....5579******87654 PP

>> PF03854.9  P-11 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.5    0.0013       1.2      16      43 ..     305     331 ..     286     335 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0013
                 EE-SS-EE-HHHHHHT-SSSSEETTTTE CS
   PF03854.9  16 veCsdHYLClrClqllLsvserCpiCkk 43 
                 + C  HY C+ C +  Lsv   Cp C++
  MMETSP1325-20131115|6586_1 305 LPC-KHYFCKACIDEWLSVNSTCPNCRT 331
                 445.5*********************86 PP

>> PF13248.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.095        87       3      15 ..     287     300 ..     285     303 .. 0.75
   2 ?   -2.4   0.5         3   2.7e+03       4       8 ..     311     315 ..     308     315 .. 0.72
   3 ?    8.4   0.1    0.0012       1.1       4      16 ..     325     338 ..     323     339 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.095
   PF13248.1   3 vtCPnCGa.vlevd 15 
                 +tCP C   ++e+d
  MMETSP1325-20131115|6586_1 287 MTCPICLSeFDEED 300
                 89****87556665 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 3
   PF13248.1   4 tCPnC 8  
                 +C +C
  MMETSP1325-20131115|6586_1 311 FCKAC 315
                 77777 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0012
   PF13248.1   4 tCPnCGa.vlevda 16 
                 tCPnC +  l +da
  MMETSP1325-20131115|6586_1 325 TCPNCRTnILASDA 338
                 9*****94477776 PP

>> PF14369.1  zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0044         4      18      33 ..     284     298 ..     274     299 .. 0.68
   2 ?    0.9   2.9      0.45   4.1e+02       3      29 ..     310     331 ..     308     334 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0044
   PF14369.1  18 edddvlCPhCgggFvE 33 
                 + d  +CP C + F E
  MMETSP1325-20131115|6586_1 284 SVDM-TCPICLSEFDE 298
                 3333.6*******955 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.45
   PF14369.1   3 yWChqCrrfvrispsedddvlCPhCgg 29 
                 y+C  C  ++      + +++CP+C+ 
  MMETSP1325-20131115|6586_1 310 YFCKACIDEWL-----SVNSTCPNCRT 331
                 55555555554.....33457****85 PP

>> PF08271.7  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   3.2     0.033        30       1      14 [.     287     300 ..     287     315 .. 0.86
   2 ?    2.6   0.0      0.08        73       2       8 ..     325     331 ..     323     341 .. 0.66

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.033
                 EE-SSS--EEHHB- CS
   PF08271.7   1 ykCPnCgstelvfD 14 
                 ++CP+C s++ ++D
  MMETSP1325-20131115|6586_1 287 MTCPICLSEFDEED 300
                 79******988887 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.08
                 E-SSS-- CS
   PF08271.7   2 kCPnCgs 8  
                 +CPnC +
  MMETSP1325-20131115|6586_1 325 TCPNCRT 331
                 5777753 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       505  (0.0369368); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.69u 0.39s 00:00:01.08 Elapsed: 00:00:00.57
# Mc/sec: 1532.84
//
Query:       MMETSP1325-20131115|6592_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 461.19
//
Query:       MMETSP1325-20131115|6588_1  [L=359]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-16   60.3   0.0    3.1e-16   59.6   0.0    1.4  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    3.6e-05   24.4   0.2    0.00041   21.0   0.1    2.3  1  PF13207.1  AAA domain
     0.0003   20.6   0.2    0.00095   18.9   0.0    1.9  2  PF07724.9  AAA domain (Cdc48 subfamily)
     0.0011   17.9   0.0     0.0017   17.2   0.0    1.2  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
     0.0014   18.6   0.0     0.0039   17.1   0.0    1.9  1  PF13401.1  AAA domain
     0.0018   18.0   0.0     0.0037   17.0   0.0    1.5  1  PF13671.1  AAA domain
     0.0022   16.7   0.0     0.0033   16.1   0.0    1.2  1  PF03215.10 Rad17 cell cycle checkpoint protein
     0.0024   18.1   0.0     0.0049   17.1   0.0    1.5  1  PF13191.1  AAA ATPase domain
     0.0038   17.4   0.0      0.029   14.5   0.0    2.2  2  PF13238.1  AAA domain
     0.0049   16.3   0.0     0.0084   15.6   0.0    1.3  1  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
  ------ inclusion threshold ------
      0.011   14.7   0.1      0.018   14.1   0.1    1.2  1  PF01078.16 Magnesium chelatase, subunit ChlI
      0.012   15.6   0.1      0.045   13.8   0.0    1.9  2  PF00910.17 RNA helicase
      0.012   15.1   0.0       0.02   14.4   0.0    1.4  1  PF01637.13 Archaeal ATPase
      0.017   14.5   0.1      0.034   13.6   0.0    1.4  1  PF05729.7  NACHT domain
      0.018   14.4   0.0      0.038   13.3   0.0    1.5  1  PF13555.1  P-loop containing region of AAA domain
       0.02   14.4   0.0      0.049   13.2   0.0    1.6  1  PF07728.9  AAA domain (dynein-related subfamily)
      0.037   12.8   0.1      0.068   11.9   0.0    1.4  1  PF05673.8  Protein of unknown function (DUF815)
      0.044   12.8   0.0      0.071   12.1   0.0    1.3  1  PF03193.11 Protein of unknown function, DUF258
      0.066   12.1   0.1       0.15   11.0   0.0    1.6  2  PF06414.7  Zeta toxin
      0.077   11.7   0.1       0.16   10.6   0.0    1.4  1  PF00931.17 NB-ARC domain
      0.086   11.6   0.0       0.13   11.0   0.0    1.2  1  PF00437.15 Type II/IV secretion system protein
        0.1   11.8   0.0       0.21   10.8   0.0    1.5  1  PF00625.16 Guanylate kinase
       0.11   12.2   0.0       0.25   11.1   0.0    1.6  1  PF13521.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.0   5.3e-19   3.1e-16       1     131 [.      73     219 ..      73     220 .. 0.80

  Alignments for each domain:
  == domain 1    score: 59.6 bits;  conditional E-value: 5.3e-19
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSS.SST-HHHHHHHHHHHHHHHHTS.............-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHHTTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsell.skyvgesekkirelfkeakeka.............kpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkieie 131
                 ++lyGp G GKT++++ava+elg+ +++is s++   k ++ +ek  ++l+  + e +             +p+i+ +D+ d+++++    s+ +++   +  ++L +  +g+k+  +++i+ig+t++pdk d++ +r+ fd+ ++++
  MMETSP1325-20131115|6588_1  73 IMLYGPSGSGKTMMVEAVASELGALLINISPSRIKeAKDFQGGEKGAQKLLHMIYEISredpekqpdgnpnAPVIVYMDDCDKFFEAGgkkSKVDKKGPVSFKKALGAYKKGFKHT-DRIIFIGTTTNPDKADKKEIRNFFDKFLFMP 219
                 68*********************************76755555555555555553333333677889999899***************6655556666666778888888888885.67**************999888898888776 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.1   6.8e-07   0.00041       2      64 ..      73     139 ..      72     321 .. 0.69

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 6.8e-07
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG.B-.-GGGS-B-----B..--SSGGGB-HHHHHHHH CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd.ll.reeglkelddger..eskdadadllaaildgl 64 
                 i ++Gp+GsGK+   +++a +lg   ++++   +  ++++ + ++g      +++ + + + + +++
  MMETSP1325-20131115|6588_1  73 IMLYGPSGSGKTMMVEAVASELGALLINISPsRIkEAKDFQGGEKGAQklLHMIYEISREDPEKQPD 139
                 899********************99999999432222333322233321122333333334444433 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.6e-06   0.00095       3      84 ..      70     160 ..      68     172 .. 0.83
   2 ?   -1.2   0.0       2.5   1.5e+03     117     134 ..     187     204 ..     181     298 .. 0.65

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1.6e-06
                 ---EEEE-------HHHHHHHHHHTT-......--EEEEGGG------.-THHHHHHHHHTTT-HHHHT--......-EEEETGGG----- CS
   PF07724.9   3 iisilllgptgvGktelakalaellfv..kkekkliradaselleeee.vehlvsrligappgyvgaeegG......ivllDEidKihpke 84 
                 i +i+l gp+g+Gkt++ +a+a+ l +   + ++  +++a++++ +e+ +++l+ +    +  + +++ +G      iv++D+ dK  + +
  MMETSP1325-20131115|6588_1  70 IKTIMLYGPSGSGKTMMVEAVASELGAllINISPSRIKEAKDFQGGEKgAQKLLHMIYEISREDPEKQPDGnpnapvIVYMDDCDKFFEAG 160
                 6689******************999987778889999999999996542788888888888888888889999*************88763 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 2.5
                 E-TT--EEEE------TT CS
   PF07724.9 117 dtknilfImtgafgsski 134
                 +t+ i+fI t+    +  
  MMETSP1325-20131115|6588_1 187 HTDRIIFIGTTTNPDKAD 204
                 577777776654333333 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.9e-06    0.0017      44      93 ..      64     113 ..      57     131 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.9e-06
   PF05496.7  44 kkreealdhvllyGpPGlGkttlakiiakelgvelkvtsgPvlekagdla 93 
                 k   + +  ++lyGp G Gkt + + +a+elg+ l   s   ++ a+d+ 
  MMETSP1325-20131115|6588_1  64 KLEANDIKTIMLYGPSGSGKTMMVEAVASELGALLINISPSRIKEAKDFQ 113
                 4555667889***********************99999999999998875 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   6.5e-06    0.0039       7      37 ..      73      95 ..      67     199 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 6.5e-06
   PF13401.1  7 lvvtGesGvGKTtllrrlarqldeeaeaaek 37
                ++++G+sG+GKT+ ++ +a++l         
  MMETSP1325-20131115|6588_1 73 IMLYGPSGSGKTMMVEAVASEL--------G 95
                79*****************987........3 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   6.2e-06    0.0037       2      29 ..      73     100 ..      72     133 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 6.2e-06
   PF13671.1   2 vllvGlpGsGKstlaerllkklgyvrls 29 
                 ++l G++GsGK+  +e+++ +lg+ +++
  MMETSP1325-20131115|6588_1  73 IMLYGPSGSGKTMMVEAVASELGALLIN 100
                 7999*******************87776 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   5.5e-06    0.0033      40      86 ..      65     110 ..      59     124 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 5.5e-06
  PF03215.10  40 lesakkrillltGPsGcgKsTtvkvlskelgikliewlnpvslkepd 86 
                 le +  + ++l GPsG+gK+  v+ ++ elg  li+  +p  +ke +
  MMETSP1325-20131115|6588_1  65 LEANDIKTIMLYGPSGSGKTMMVEAVASELGALLINI-SPSRIKEAK 110
                 566666777889********************99976.999988753 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   8.2e-06    0.0049      25      57 ..      72      99 ..      59     153 .. 0.69

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 8.2e-06
   PF13191.1 25 lllvtGpsGiGKSsLlrelakpillerlrfaag 57
                 + ++GpsG+GK+ ++++     ++++l  +  
  MMETSP1325-20131115|6588_1 72 TIMLYGPSGSGKTMMVEA-----VASELGALLI 99
                578***************.....6665555444 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   4.8e-05     0.029       1      42 [.      73     114 ..      73     164 .. 0.81
   2 ?    0.3   0.0       1.2     7e+02      78     117 ..     240     290 ..     194     301 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 4.8e-05
   PF13238.1   1 IlitGtpGvGKtTlakeLaerlgdvlrdlakengleeevddk 42 
                 I++ G++G+GKt   ++ a++lg  l+++ +++  e  +++ 
  MMETSP1325-20131115|6588_1  73 IMLYGPSGSGKTMMVEAVASELGALLINISPSRIKEAKDFQG 114
                 89************************9999998877777776 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 1.2
   PF13238.1  78 idghlaeleledlkdlkl...........vvLradpeelarRlekRgrkee 117
                 + g+  ++e +d++dl +            v r+ + +l +R  +R  k++
  MMETSP1325-20131115|6588_1 240 LSGGQLHKEIPDDFDLSTlarisegfsagAVHRCVKKTLTKRRVDRLDKRA 290
                 567777888888888888888888888888889999999999999886654 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.4e-05    0.0084       8      49 ..      61     104 ..      55     140 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.4e-05
  PF02367.12   8 laellkagdv..vlLsGdlGaGKTtlvkglakglgvkgevtSPt 49 
                 +  +l+a+d+  ++L G+ G+GKT++v ++a++lg     +SP+
  MMETSP1325-20131115|6588_1  61 VKAKLEANDIktIMLYGPSGSGKTMMVEAVASELGALLINISPS 104
                 5566777765559*********************9987667776 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1     3e-05     0.018      22      46 ..      70      94 ..      57     125 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3e-05
  PF01078.16 22 gHnlllvGppGsGKtmlakrlpsll 46
                   ++l+Gp+GsGKtm+ ++++s l
  MMETSP1325-20131115|6588_1 70 IKTIMLYGPSGSGKTMMVEAVASEL 94
                5679************977765433 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   7.5e-05     0.045       1      24 [.      73      96 ..      73     138 .. 0.84
   2 ?   -1.4   0.0       3.9   2.3e+03      24      70 ..     162     208 ..     147     220 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 7.5e-05
  PF00910.17  1 iwlyGpsgeGKStlakeLakallk 24
                i+lyGpsg GK+++++ +a++l  
  MMETSP1325-20131115|6588_1 73 IMLYGPSGSGKTMMVEAVASELGA 96
                78***************9999975 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 3.9
  PF00910.17  24 kklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdeenpsdl 70 
                 kk+k +kk+ v ++++   + +g+++ + +++     ++d+++++++
  MMETSP1325-20131115|6588_1 162 KKSKVDKKGPVSFKKALGAYKKGFKHTDRIIFIGTTTNPDKADKKEI 208
                 66677788888888888888888888888888888888887644343 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.4e-05      0.02      15      82 ..      65     126 ..      59     192 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 3.4e-05
                 HHH..-SEEEEE--TT---HHHHHHHHHH-..---HHHHH------HHHHHHHH....HHHS-SHHHH CS
  PF01637.13  15 lerepnsiiviyGprrsGKTaLlkeileelkekgkrvvyyinlreefeskleefieeeeekkklakal 82 
                 le +  + i++yGp +sGKT +++ +++el         +in +  ++++ ++f   e+ ++kl +++
  MMETSP1325-20131115|6588_1  65 LEANDIKTIMLYGPSGSGKTMMVEAVASEL------GALLINISPSRIKEAKDFQGGEKGAQKLLHMI 126
                 5555667799*******************9......56667777788888888855566666666555 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   5.7e-05     0.034       2      24 ..      72      94 ..      71      97 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5.7e-05
   PF05729.7  2 tvilqGeaGsGKTtLlqklasaw 24
                t++l G++GsGKT+++  +as++
  MMETSP1325-20131115|6588_1 72 TIMLYGPSGSGKTMMVEAVASEL 94
                899****************9987 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   6.5e-05     0.038      24      44 ..      71      91 ..      60      98 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 6.5e-05
   PF13555.1 24 kntlltGasGsGKSTllDAiq 44
                k+ +l G+sGsGK+ ++ A++
  MMETSP1325-20131115|6588_1 71 KTIMLYGPSGSGKTMMVEAVA 91
                4689**************987 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.2e-05     0.049       2      24 ..      73      95 ..      72     115 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 8.2e-05
                EEEE------HHHHHHHGGGGBS CS
   PF07728.9  2 vlLvGppGtgKselaerlaealn 24
                ++L Gp+G+gK++++e +a+ l+
  MMETSP1325-20131115|6588_1 73 IMLYGPSGSGKTMMVEAVASELG 95
                79**************9998775 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011     0.068      42      93 ..      59     107 ..      56     122 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00011
   PF05673.8  42 enteqflkglpannvLLwGarGtGKSslvkallneyaeegLrlievekedlk 93 
                 +n+++ l+ +  + ++L+G  G+GK  +v a+ +e+ +    li+++ +++k
  MMETSP1325-20131115|6588_1  59 RNVKAKLEANDIKTIMLYGPSGSGKTMMVEAVASELGA---LLINISPSRIK 107
                 57778888888899******************999865...46666666665 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00012     0.071      24      67 ..      60     102 ..      39     123 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00012
                 TT-HHHHHHCTT.SBEEEE-------HHHHHHH--------S--- CS
  PF03193.11  24 egleelaellkd.ktsvlvGqSGvGKSsLinallpeldlkvgevs 67 
                 +  ++l++  +d kt++l G+SG GK+ +++a+++el +   ++s
  MMETSP1325-20131115|6588_1  60 NVKAKLEA--NDiKTIMLYGPSGSGKTMMVEAVASELGALLINIS 102
                 44444443..33599******************999865555554 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00025      0.15      17      55 ..      71     108 ..      58     133 .. 0.88
   2 ?   -3.4   0.0       6.7     4e+03      96     111 ..     190     205 ..     182     211 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00025
   PF06414.7  17 kavllgGqpGAGKtslaellleelaagnivridaDelrk 55 
                 k ++l G+ G+GKt + e++  el +   ++i++ ++++
  MMETSP1325-20131115|6588_1  71 KTIMLYGPSGSGKTMMVEAVASEL-GALLINISPSRIKE 108
                 789999******************.99999999988876 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 6.7
   PF06414.7  96 niilegtlrspdkark 111
                  ii+ gt ++pdka+k
  MMETSP1325-20131115|6588_1 190 RIIFIGTTTNPDKADK 205
                 6888899999999987 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00027      0.16       7      40 ..      60      91 ..      58      95 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00027
                HHHHHHHTTTSSSEEEEEE-------HHHHHHHT CS
  PF00931.17  7 kviekLleeeeelkvvglvGmgGvGKttlakqvy 40
                +v+ kL    +++k + l+G  G+GKt ++++v 
  MMETSP1325-20131115|6588_1 60 NVKAKLEA--NDIKTIMLYGPSGSGKTMMVEAVA 91
                56777777..99****************999986 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00022      0.13     106     153 ..      50      95 ..      32     102 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00022
  PF00437.15 106 dlaakgalkkklaevlrqavqargnilvsGgTgsGKttllnallaein 153
                 ++   +  ++++++ l++     ++i++ G+ gsGKt +++a+ +e+ 
  MMETSP1325-20131115|6588_1  50 EYCVLPLGSRNVKAKLEAN--DIKTIMLYGPSGSGKTMMVEAVASELG 95 
                 5555555556666666666..7789*****************998876 PP

>> PF00625.16  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00036      0.21       3      26 ..      71      94 ..      69     110 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00036
                -EEEEE------HHHHHHHHHHH- CS
  PF00625.16  3 rpivlvGpsgvGkstlkkaLldel 26
                ++i l Gpsg+Gk+++ +a+ +el
  MMETSP1325-20131115|6588_1 71 KTIMLYGPSGSGKTMMVEAVASEL 94
                89****************998876 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00042      0.25       2      44 ..      73     116 ..      72     151 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00042
   PF13521.1   2 ivitGgpstGKTtlleaLaar.gypvvpEvarevleeklakgee 44 
                 i++ G++++GKT  +ea+a++ g   +     ++ e k ++g+e
  MMETSP1325-20131115|6588_1  73 IMLYGPSGSGKTMMVEAVASElGALLINISPSRIKEAKDFQGGE 116
                 899****************7557766666666666666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.75u 0.39s 00:00:01.14 Elapsed: 00:00:00.59
# Mc/sec: 1458.12
//
Query:       MMETSP1325-20131115|6593_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 609.51
//
Query:       MMETSP1325-20131115|6594_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 281.92
//
Query:       MMETSP1325-20131115|6597_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       77  (0.00563195); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|6599_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.096   11.4   0.2       0.13   11.0   0.1    1.2  1  PF12715.2  Abhydrolase family
       0.11   12.2   4.8       0.19   11.5   3.3    1.4  1  PF11166.3  Protein of unknown function (DUF2951)
       0.15   10.0   0.8       0.19    9.6   0.6    1.1  1  PF01601.11 Coronavirus S2 glycoprotein
        0.3   10.2   5.6       0.38    9.9   3.9    1.1  1  PF05549.6  Allexivirus 40kDa protein
       0.47    9.0   3.9       0.57    8.8   2.7    1.1  1  PF10337.4  Protein of unknown function (DUF2422)
       0.65    9.8  10.1      0.059   13.2   3.3    1.8  2  PF10986.3  Protein of unknown function (DUF2796)
        5.5    6.5  12.1        0.1   12.2   1.1    2.3  2  PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit


Domain annotation for each model (and alignments):
>> PF12715.2  Abhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   6.6e-05      0.13      45      84 ..      63     102 ..      46     118 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.6e-05
                 -HHHHHHHH---HHHHHHHH-----------EEEEEEE-- CS
   PF12715.2  45 skkefakwqekvrkamqeimkfpkikdspapvlvktvkre 84 
                 +++e ++wq+k+ ++m++im   + +++    + k+v+ +
  MMETSP1325-20131115|6599_1  63 THRESSQWQKKMNESMEQIMTALQTQSEAIEAISKQVHEN 102
                 578999**************99988887666655555444 PP

>> PF11166.3  Protein of unknown function (DUF2951)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.3   9.6e-05      0.19      20      78 ..      71     129 ..      60     145 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 9.6e-05
   PF11166.3  20 dkkifesldkikegqktqekvnqkldltldsikrereldkekkeenaknikdvkmwilG 78 
                 +kk+ es+++i ++++tq +  + + +++ + k++++   +++e n+++i+ +  + lG
  MMETSP1325-20131115|6599_1  71 QKKMNESMEQIMTALQTQSEAIEAISKQVHENKQQQQHLVRQEELNRREIRRLSHFALG 129
                 69***********************************99**************999998 PP

>> PF01601.11  Coronavirus S2 glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.6   9.9e-05      0.19     255     295 ..      72     112 ..      65     121 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 9.9e-05
  PF01601.11 255 nsFNkAlgniqegletvasAlskvqdvvNqqaeaLsklvkq 295
                 ++ N+ +++i ++l+t ++A++ + + v ++ ++ ++lv+q
  MMETSP1325-20131115|6599_1  72 KKMNESMEQIMTALQTQSEAIEAISKQVHENKQQQQHLVRQ 112
                 678***********************************998 PP

>> PF05549.6  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.9   0.00019      0.38      41     147 ..      58     158 ..      55     183 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00019
   PF05549.6  41 GqLhaLhqnsLeWLthishdvdsiinklnpvsllsqttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsssetseseg 147
                 G  h  h+ s  W   +++ +++i++ l++      +  +  + +++++ +++ ++l ++e+  + ++++ s+   l + e ++++l +l  k   +s+ e+++s  
  MMETSP1325-20131115|6599_1  58 GDGHETHRESSQWQKKMNESMEQIMTALQTQ-----SEAIEAISKQVHENKQQQQHLVRQEELNRREIRRLSHFA-LGDNEDLKRKLMTLESKESAVSQWESDSSVY 158
                 556999**********************998.....445556666666666666666666666666665555554.4455666666666666665555555554443 PP

>> PF10337.4  Protein of unknown function (DUF2422)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.7   0.00029      0.57     340     457 ..      37     151 ..      16     153 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00029
   PF10337.4 340 eekyaevgayetkesikllear.aaersltvseldevmkalhepfaelleavdeglehivewleaanrfriyslllpknkkkhkekqkelaaelkevkealeealakfkkakrlalltw 457
                 +++y+e ++ e+++++ +  +  + e +++ s++++ m +  e     l++  e++e i+++++ ++++     +l ++++ ++++   l++ + +  e+l+++l  + ++k+ a+ +w
  MMETSP1325-20131115|6599_1  37 DDTYSEGAEAENRHKVHGHGQGdGHETHRESSQWQKKMNESMEQIMTALQTQSEAIEAISKQVHENKQQQ---QHLVRQEELNRREIRRLSHFALGDNEDLKRKLMTL-ESKESAVSQW 151
                 5566666666666666666533566666777777776666666666677778888888888888877777...46777777777777777777799999999999888.7777776666 PP

>> PF10986.3  Protein of unknown function (DUF2796)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   3.3     3e-05     0.059      89     163 ..      38     112 ..      17     116 .. 0.76
   2 ?   -0.7   0.2      0.55   1.1e+03      46      85 ..     133     172 ..     129     187 .. 0.56

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3e-05
   PF10986.3  89 hhdhddhdhdhehdhdehddhdeHsdfeaeyqfeCekpaklkeidlklfkqFpatekievqlitdkgqkaaeltk 163
                 ++ ++ +++++ h+ + h + d+H+  + + q++ +  + +++i ++l +q +a+e i+ q+ ++k+q++  + +
  MMETSP1325-20131115|6599_1  38 DTYSEGAEAENRHKVHGHGQGDGHETHRESSQWQKKMNESMEQIMTALQTQSEAIEAISKQVHENKQQQQHLVRQ 112
                 2222222344458888899999999999999******************************99988888766555 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.55
   PF10986.3  46 aleaavakLekpeelfalpkaakCkleeaevessleeeee 85 
                  l++ + +Le++e+ ++  +++++  +e++++ s+ee e+
  MMETSP1325-20131115|6599_1 133 DLKRKLMTLESKESAVSQWESDSSVYTESDYTESEEEGEA 172
                 5555666676666666666666666666666665555432 PP

>> PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.1   5.3e-05       0.1      19      85 ..      63     128 ..      30     130 .. 0.63
   2 ?   -0.6   2.3      0.45   8.8e+02       7      38 ..     148     181 ..     139     188 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.3e-05
   PF05320.7  19 eyeeeeedeedaeslessdvsslkqsdyk.vesaseeiedaessskqvsekikaikkrytrrisLfel 85 
                  + e+ ++ +++ +++ ++++++ q++++ +e++s+++++++++++++  + +++ +r  rr+s f l
  MMETSP1325-20131115|6599_1  63 THRES-SQWQKKMNESMEQIMTALQTQSEaIEAISKQVHENKQQQQHL-VRQEELNRREIRRLSHFAL 128
                 22222.222333344445555555554441577777777666665555.56799*********99865 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.45
   PF05320.7   7 iedyesddd..eeeeyeeeeedeedaeslessdv 38 
                 +++ esd +  +e++y+e+ee+ e + +++ ++ 
  MMETSP1325-20131115|6599_1 148 VSQWESDSSvyTESDYTESEEEGEATIQEDGEEA 181
                 4455555541134566666666555545444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2386  (0.174517); expected 273.4 (0.02)
Passed bias filter:                      929  (0.0679491); expected 273.4 (0.02)
Passed Vit filter:                       128  (0.0093622); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.41s 00:00:01.09 Elapsed: 00:00:00.50
# Mc/sec: 905.82
//
Query:       MMETSP1325-20131115|6598_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.51
# Mc/sec: 1141.79
//
Query:       MMETSP1325-20131115|6602_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 244.16
//
Query:       MMETSP1325-20131115|6601_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 913.61
//
Query:       MMETSP1325-20131115|6604_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 568.55
//
Query:       MMETSP1325-20131115|6603_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 976.98
//
Query:       MMETSP1325-20131115|6605_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-25   87.1   2.6    5.3e-25   86.8   1.8    1.1  1  PF00226.26 DnaJ domain
  ------ inclusion threshold ------
      0.094   11.6   0.6       0.12   11.3   0.4    1.0  1  PF02510.9  Surface presentation of antigens protein


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.8   1.8   7.7e-29   5.3e-25       1      64 []       2      66 ..       2      66 .. 0.99

  Alignments for each domain:
  == domain 1    score: 86.8 bits;  conditional E-value: 7.7e-29
                HHHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCC.HHHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26  1 dyYeiLgvpkdasdeeIkkaYrklalkyHPDknkdde.eeaeekfkeineAyevLsdpekraeyd 64
                d+Y++Lgvp++a+++ IkkaY+k+al++HPDk + de e+ae+ f +i +Aye+Lsd+e+ra+yd
  MMETSP1325-20131115|6605_1  2 DHYKVLGVPRNADSKAIKKAYKKKALEFHPDKVPPDErEKAEQEFMKIGAAYEILSDDETRAKYD 66
                89********************************999999************************9 PP

>> PF02510.9  Surface presentation of antigens protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   1.7e-05      0.12      25      92 ..      15      85 ..       9      89 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.7e-05
   PF02510.9 25 sealkkalekhkteyiddk...kdreygdsfvmhketalpvllaalrqgapakseqhsgnvsglqhnvkge 92
                s+a+kka +k+  e+  dk    +re  +   m+  +a  +l     +    + e+ sgn  g qh  +g+
  MMETSP1325-20131115|6605_1 15 SKAIKKAYKKKALEFHPDKvppDEREKAEQEFMKIGAAYEILSDDETRAKYDRGEDVSGNNGGQQHHHQGH 85
                89****************955558*******************99999999***************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|6608_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.7   0.0       0.03   14.4   0.0    1.1  1  PF00435.16 Spectrin repeat
      0.029   13.0   0.1      0.031   13.0   0.1    1.0  1  PF02646.11 RmuC family
      0.042   13.3   0.3      0.042   13.3   0.2    1.1  1  PF06791.8  Prophage tail length tape measure protein
      0.061   13.0   0.0      0.065   12.9   0.0    1.1  1  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
      0.086   12.6   0.1       0.13   12.1   0.1    1.2  1  PF10749.4  Protein of unknown function (DUF2534)
       0.11   12.0   0.0       0.13   11.9   0.0    1.1  1  PF08856.6  Protein of unknown function (DUF1826)


Domain annotation for each model (and alignments):
>> PF00435.16  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.3e-05      0.03      15      61 ..      16      63 ..      13      66 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.3e-05
                HHHHHHHHHH.HCCCHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00435.16 15 eWieekeell.ssedlgkdleevqallkkhkaleaelaaqqervealn 61
                eW +  +++  +s + gk+++++++ ++k++ +e +++a   +ve+l 
  MMETSP1325-20131115|6608_1 16 EWVSSLMAMQsQSGQAGKTVDQLETIIRKLTSVEGDIKALGSKVENLH 63
                6777777777456666*****************************997 PP

>> PF02646.11  RmuC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.4e-05     0.031      23      65 ..      25      67 ..      19      70 .] 0.89

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.4e-05
  PF02646.11 23 eesfekeaeelerLeeelkqlqelngeiqqlakevknLkkiLk 65
                ++ ++++ +++ +Le  +++l  ++g+i++l ++v+nL +++ 
  MMETSP1325-20131115|6608_1 25 QSQSGQAGKTVDQLETIIRKLTSVEGDIKALGSKVENLHAAFL 67
                55677888999****************************9985 PP

>> PF06791.8  Prophage tail length tape measure protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.2   1.8e-05     0.042     102     144 ..      21      63 ..       2      69 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.8e-05
   PF06791.8 102 nkaliltgnaaGvtasqLadmarkisavggtqgaaaealtaLa 144
                  +a+++  ++aG+t +qL++++rk+++v g  +a  + +++L 
  MMETSP1325-20131115|6608_1  21 LMAMQSQSGQAGKTVDQLETIIRKLTSVEGDIKALGSKVENLH 63 
                 48999*********************99998888777777765 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.9e-05     0.065      26     106 ..      25      64 ..       8      69 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.9e-05
   PF04513.7  26 rlqnvqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsiltnLlssvtNins 106
                 ++q+ q                                          +++ +l+ t+  +Lt+++ ++  L s+v N+ +
  MMETSP1325-20131115|6608_1  25 QSQSGQA----------------------------------------GKTVDQLE-TIIRKLTSVEGDIKALGSKVENLHA 64 
                 3333333........................................33344443.4444555555555555555555554 PP

>> PF10749.4  Protein of unknown function (DUF2534)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   5.5e-05      0.13      36      58 ..       4      26 ..       1      29 [. 0.93

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.5e-05
   PF10749.4 36 eGvieqyniPlseWttsmfvlqs 58
                +Gv + y  P  eW +s+ ++qs
  MMETSP1325-20131115|6608_1  4 GGVASTYGGPSAEWVSSLMAMQS 26
                79********************8 PP

>> PF08856.6  Protein of unknown function (DUF1826)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.5e-05      0.13     119     158 ..       8      47 ..       6      63 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 5.5e-05
   PF08856.6 119 ttYrGagtewleedevdreklgagsaekpdeeeeiqqlet 158
                  tY G+  ew+++  + +++ g++ ++  + e+ i++l++
  MMETSP1325-20131115|6608_1   8 STYGGPSAEWVSSLMAMQSQSGQAGKTVDQLETIIRKLTS 47 
                 6************999999888666554444666777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.59
# Mc/sec: 284.31
//
Query:       MMETSP1325-20131115|6607_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 670.98
//
Query:       MMETSP1325-20131115|6609_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 262.24
//
Query:       MMETSP1325-20131115|6611_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00029   18.9   0.0    0.00029   18.9   0.0    1.0  1  PF01175.13 Urocanase
  ------ inclusion threshold ------
       0.12   11.8   0.0       0.16   11.4   0.0    1.2  1  PF00432.16 Prenyltransferase and squalene oxidase repeat


Domain annotation for each model (and alignments):
>> PF01175.13  Urocanase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   4.2e-08   0.00029     511     539 ..       1      29 [.       1      41 [. 0.85

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 4.2e-08
  PF01175.13 511 vltnDpalGviRhadagyeeakevakekg 539
                 +l+ D+ +Gv+R+a+ag+++a+e++++++
  MMETSP1325-20131115|6611_1   1 MLHFDVFNGVARRAWAGNDNAIEYVRDEQ 29 
                 6999*****************98887744 PP

>> PF00432.16  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.3e-05      0.16       5      26 ..      20      41 ..      19      47 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.3e-05
                HHHHHHHHHSH-----BS-TCC CS
  PF00432.16  5 kavdfLlscQnpdGGwggrpgs 26
                 a+++++  Q ++GG+   p s
  MMETSP1325-20131115|6611_1 20 NAIEYVRDEQEKNGGLVLTPAS 41
                69*************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|6610_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-05   24.3   0.0      0.021   14.2   0.0    2.9  3  PF00637.15 Region in Clathrin and VPS
    0.00033   18.8   0.0       0.26    9.2   0.0    2.1  2  PF04097.9  Nup93/Nic96
     0.0022   17.4   0.7          2    7.9   0.0    3.5  2  PF13414.1  TPR repeat
     0.0025   17.3   0.1      0.046   13.4   0.0    2.9  2  PF13176.1  Tetratricopeptide repeat
     0.0031   17.1   1.5        3.2    7.7   0.0    3.8  4  PF07719.12 Tetratricopeptide repeat
     0.0037   16.7   3.9       0.63    9.6   0.1    4.6  6  PF00515.23 Tetratricopeptide repeat
     0.0045   17.3   0.0        5.9    7.6   0.0    2.7  2  PF13428.1  Tetratricopeptide repeat
      0.009   15.7   0.0       0.15   11.8   0.0    2.7  3  PF04212.13 MIT (microtubule interacting and transport) domain
  ------ inclusion threshold ------
      0.012   15.2   0.0        4.3    7.0   0.0    2.3  2  PF10625.4  Universal stress protein B (UspB)
      0.013   15.2   0.0        0.7    9.7   0.0    3.0  2  PF13424.1  Tetratricopeptide repeat
      0.036   13.9   2.2         55    3.9   0.0    4.1  5  PF01535.15 PPR repeat
      0.041   13.7   1.2         20    5.1   0.0    3.4  3  PF13041.1  PPR repeat family
      0.075   12.2   0.1          3    7.0   0.0    2.3  2  PF10602.4  26S proteasome subunit RPN7


Domain annotation for each model (and alignments):
>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0036       3.8      93     134 ..       4      45 ..       1      48 [. 0.91
   2 !   14.2   0.0     2e-05     0.021      80     142 ..      45     116 ..      42     117 .. 0.89
   3 !    6.6   0.0    0.0046       4.8      74     110 ..     103     140 ..      84     150 .. 0.77

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0036
                 H----THHHHSS-SSTT--TTGGGTTTTT---TTHHHHHHHH CS
  PF00637.15  93 ykkinefkkaisllkklkdfddaieyakkasdpelwekllea 134
                 y + +++++ai l+k+ ++  + + ya+k++ + ++e+++ +
  MMETSP1325-20131115|6610_1   4 YAQSGCYNHAIRLAKNFGLDSELMSYAIKSRPSLMVECAVYF 45 
                 88899**************************99999998765 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 2e-05
                 HHT-SSHHHHHHHH----THHHHSS-.SSTT--TTGGG.TTTTT---.......TTHHHHHHHHHHHH-STT CS
  PF00637.15  80 cekadlyeeavilykkinefkkaisl.lkklkdfddai.eyakkasd.......pelwekllealldnkkfe 142
                  e+++ +e av ly+k +++ ka++l  k  ++ +  + e++k++++       p+++++ +e++++++ fe
  MMETSP1325-20131115|6610_1  45 FESKGEFEKAVQLYQKGGDIPKALDLcFKAGSQGRTSMfEVLKNIANdlddqtsPQTVARCAEFFIEHGHFE 116
                 5788899******************8688888888888*999999999999999**************9987 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0046
                 THHHHHHHT-SSHHHHHHHH----THHHHSS-.SSTT- CS
  PF00637.15  74 ekvaklcekadlyeeavilykkinefkkaisl.lkklk 110
                 ++ a++  +++++e av l+   +++ +ai+l ++++ 
  MMETSP1325-20131115|6610_1 103 ARCAEFFIEHGHFEKAVQLFMTGKRYVRAIDLcMQHKV 140
                 45677778999999999999999999999996455544 PP

>> PF04097.9  Nup93/Nic96
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00025      0.26     416     453 ..      37      74 ..      31      78 .. 0.88
   2 !    7.9   0.0   0.00061      0.64     403     450 ..      88     135 ..      72     139 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00025
   PF04097.9 416 iteqaAeeaeeegriedAilLyqlaeeydkvvslinkl 453
                 ++ + A  +e +g++e+A++Lyq  ++  k+++l  k+
  MMETSP1325-20131115|6610_1  37 LMVECAVYFESKGEFEKAVQLYQKGGDIPKALDLCFKA 74 
                 68899999**********************99987766 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00061
   PF04097.9 403 LikledeeeflrqiteqaAeeaeeegriedAilLyqlaeeydkvvsli 450
                  i+ + +++   q + + Ae + e g +e+A++L+   ++y ++++l 
  MMETSP1325-20131115|6610_1  88 NIANDLDDQTSPQTVARCAEFFIEHGHFEKAVQLFMTGKRYVRAIDLC 135
                 4667777888889999****************************9975 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0019         2       9      29 ..      41      61 ..      33      67 .. 0.85
   2 ?    4.0   0.0     0.032        34      16      50 ..     112     124 ..      87     137 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0019
   PF13414.1  9 lGnalfkegdydeAieayekA 29
                 + ++ ++g++++A+++y+k+
  MMETSP1325-20131115|6610_1 41 CAVYFESKGEFEKAVQLYQKG 61
                57778889**********996 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.032
   PF13414.1  16 egdydeAieayekAleldpnnaelyynlAlaylkl 50 
                  g +++A++++                        
  MMETSP1325-20131115|6610_1 112 HGHFEKAVQLFM----------------------T 124
                 444444444443......................3 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   4.3e-05     0.046       6      27 ..      42      61 ..      37      95 .. 0.87
   2 ?    0.2   0.0      0.73   7.7e+02      13      22 ..     113     122 ..     103     123 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.3e-05
   PF13176.1  6 arlysrlgdyekAielyeraLa 27
                a+ +++ g++ekA++ly++  +
  MMETSP1325-20131115|6610_1 42 AVYFESKGEFEKAVQLYQK--G 61
                677889************9..4 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.73
   PF13176.1  13 gdyekAiely 22 
                 g +ekA++l+
  MMETSP1325-20131115|6610_1 113 GHFEKAVQLF 122
                 889****986 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1      0.14   1.4e+02      10      23 ..       3      16 ..       2      20 .. 0.67
   2 !    7.7   0.0    0.0031       3.2       9      26 ..      43      60 ..      37      71 .. 0.88
   3 ?    3.5   0.0     0.069        73      13      24 ..     111     122 ..     103     125 .. 0.72
   4 ?   -3.0   0.0       8.5   8.9e+03      16      23 ..     127     134 ..     126     137 .. 0.54

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.14
                HHHHTT-HHHHHHH CS
  PF07719.12 10 ayyklgdyeeAlea 23
                 y+++g y+ A+++
  MMETSP1325-20131115|6610_1  3 YYAQSGCYNHAIRL 16
                57777777777765 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0031
                HHHHHTT-HHHHHHHHHH CS
  PF07719.12  9 layyklgdyeeAleafek 26
                   + +g++e+A+++++k
  MMETSP1325-20131115|6610_1 43 VYFESKGEFEKAVQLYQK 60
                5677899*********98 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.069
                 HTT-HHHHHHHH CS
  PF07719.12  13 klgdyeeAleaf 24 
                 + g++e+A+++f
  MMETSP1325-20131115|6610_1 111 EHGHFEKAVQLF 122
                 667777777766 PP

  == domain 4    score: -3.0 bits;  conditional E-value: 8.5
                 -HHHHHHH CS
  PF07719.12  16 dyeeAlea 23 
                 +y +A+++
  MMETSP1325-20131115|6610_1 127 RYVRAIDL 134
                 45555544 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.24   2.5e+02      23      33 ..       9      19 ..       2      20 .. 0.67
   2 !    9.6   0.1    0.0006      0.63      11      26 ..      45      60 ..      41      61 .. 0.87
   3 !    6.2   0.1    0.0068       7.1      10      27 ..      57      74 ..      56      74 .. 0.93
   4 ?   -3.3   0.0       6.9   7.3e+03       3       9 ..      85      91 ..      84      95 .. 0.76
   5 ?    0.5   0.0      0.43   4.5e+02      23      30 ..     114     121 ..     109     125 .. 0.66
   6 ?   -0.9   0.0       1.2   1.3e+03      15      24 ..     126     135 ..     120     137 .. 0.75

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.24
                HHHHHHHHHTT CS
  PF00515.23 23 yyekALelnPn 33
                +y+ A++l  n
  MMETSP1325-20131115|6610_1  9 CYNHAIRLAKN 19
                67777777665 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0006
                HHHTT-HHHHHHHHHH CS
  PF00515.23 11 ylklgkydeAleyyek 26
                + ++g++++A++ y+k
  MMETSP1325-20131115|6610_1 45 FESKGEFEKAVQLYQK 60
                7789***********9 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.0068
                HHHHTT-HHHHHHHHHHH CS
  PF00515.23 10 aylklgkydeAleyyekA 27
                +y+k g+  +Al+ + kA
  MMETSP1325-20131115|6610_1 57 LYQKGGDIPKALDLCFKA 74
                89*************998 PP

  == domain 4    score: -3.3 bits;  conditional E-value: 6.9
                HHHHHHH CS
  PF00515.23  3 alynlGn 9 
                +l+n++n
  MMETSP1325-20131115|6610_1 85 VLKNIAN 91
                7889998 PP

  == domain 5    score: 0.5 bits;  conditional E-value: 0.43
                 HHHHHHHH CS
  PF00515.23  23 yyekALel 30 
                 ++ekA++l
  MMETSP1325-20131115|6610_1 114 HFEKAVQL 121
                 45555554 PP

  == domain 6    score: -0.9 bits;  conditional E-value: 1.2
                 T-HHHHHHHH CS
  PF00515.23  15 gkydeAleyy 24 
                 ++y  A++ +
  MMETSP1325-20131115|6610_1 126 KRYVRAIDLC 135
                 7899999877 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0056       5.9       8      27 ..      42      61 ..      37      74 .. 0.84
   2 !    6.9   0.0    0.0098        10       4      24 ..     102     122 ..      99     134 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0056
   PF13428.1  8 arallalGdpdeAiallrra 27
                a +++  G++++A++l+++ 
  MMETSP1325-20131115|6610_1 42 AVYFESKGEFEKAVQLYQKG 61
                5678889**********986 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0098
   PF13428.1   4 llalarallalGdpdeAiall 24 
                  ++ a+++++ G++++A++l+
  MMETSP1325-20131115|6610_1 102 VARCAEFFIEHGHFEKAVQLF 122
                 56789**************98 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.1   4.3e+03      19      27 ..       8      16 ..       6      19 .. 0.55
   2 !   11.8   0.0   0.00014      0.15      12      33 ..      42      63 ..      36      65 .. 0.87
   3 ?    0.4   0.0      0.51   5.4e+02      29      38 ..     116     125 ..     111     143 .. 0.62

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 4.1
                T-HHHHHHH CS
  PF04212.13 19 gkyeeAlel 27
                g y+ A++l
  MMETSP1325-20131115|6610_1  8 GCYNHAIRL 16
                555555555 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00014
                HHHHHHTT-HHHHHHHHHHHHH CS
  PF04212.13 12 AveaDeagkyeeAlelYkeAle 33
                Av  + +g++e+A++lY+++ +
  MMETSP1325-20131115|6610_1 42 AVYFESKGEFEKAVQLYQKGGD 63
                88889**************965 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.51
                 HHHHHHHHHH CS
  PF04212.13  29 keAlelLlqa 38 
                 ++A++l++++
  MMETSP1325-20131115|6610_1 116 EKAVQLFMTG 125
                 3445555444 PP

>> PF10625.4  Universal stress protein B (UspB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0041       4.3      43      64 ..      38      59 ..      10      61 .. 0.88
   2 ?    6.3   0.0    0.0065       6.9      47      76 ..     106     133 ..      81     146 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0041
   PF10625.4 43 qvdGrgfftthGnlskqvrllh 64
                 v+  ++f ++G++ k v+l++
  MMETSP1325-20131115|6610_1 38 MVECAVYFESKGEFEKAVQLYQ 59
                48899***************97 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0065
   PF10625.4  47 rgfftthGnlskqvrllhyikskeyldhhd 76 
                   ff  hG++ k v+l+  ++ k+y    d
  MMETSP1325-20131115|6610_1 106 AEFFIEHGHFEKAVQLF--MTGKRYVRAID 133
                 57**************8..45666665555 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00067       0.7      46      71 ..      35      60 ..       4      67 .. 0.75
   2 ?    2.2   0.0      0.15   1.6e+02      50      69 ..     103     122 ..      84     131 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00067
   PF13424.1 46 aralnnlanlylalgdydeAleylek 71
                 +++ ++a +++ +g++++A+++++k
  MMETSP1325-20131115|6610_1 35 PSLMVECAVYFESKGEFEKAVQLYQK 60
                44589999999*************98 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.15
   PF13424.1  50 nnlanlylalgdydeAleyl 69 
                   +a+ + ++g +++A++++
  MMETSP1325-20131115|6610_1 103 ARCAEFFIEHGHFEKAVQLF 122
                 56777788888888888876 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.13   1.4e+02       7      22 ..       1      16 [.       1      18 [. 0.90
   2 ?    3.6   0.0     0.064        68      12      25 ..      47      60 ..      45      61 .. 0.87
   3 ?    0.3   0.0      0.72   7.6e+02      10      22 ..      58      70 ..      56      74 .. 0.83
   4 ?    3.9   0.0     0.053        55      12      23 ..     111     122 ..     109     126 .. 0.88
   5 ?   -3.1   0.0       8.9   9.3e+03      21      28 ..     141     148 ..     140     148 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.13
  PF01535.15  7 IsgyckaGkleeAlel 22
                I+ y+++G++  A++l
  MMETSP1325-20131115|6610_1  1 INYYAQSGCYNHAIRL 16
                788**********987 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.064
  PF01535.15 12 kaGkleeAlelfke 25
                ++G++e+A++l+++
  MMETSP1325-20131115|6610_1 47 SKGEFEKAVQLYQK 60
                589********985 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.72
  PF01535.15 10 yckaGkleeAlel 22
                y k G++ +Al+l
  MMETSP1325-20131115|6610_1 58 YQKGGDIPKALDL 70
                6689*******98 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.053
  PF01535.15  12 kaGkleeAlelf 23 
                  +G +e+A++lf
  MMETSP1325-20131115|6610_1 111 EHGHFEKAVQLF 122
                 69*********9 PP

  == domain 5    score: -3.1 bits;  conditional E-value: 8.9
  PF01535.15  21 elfkeMke 28 
                 +l +eM+e
  MMETSP1325-20131115|6610_1 141 KLTDEMVE 148
                 67789976 PP

>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.21   2.2e+02      10      25 ..       1      16 [.       1      19 [. 0.91
   2 ?    3.7   0.0     0.053        56      13      27 ..      45      59 ..      43      60 .. 0.86
   3 ?    5.1   0.0     0.019        20      13      27 ..     109     123 ..     107     133 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.21
   PF13041.1 10 IsglckkgkveeAfkl 25
                I+++++ g ++ A++l
  MMETSP1325-20131115|6610_1  1 INYYAQSGCYNHAIRL 16
                89***********998 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.053
   PF13041.1 13 lckkgkveeAfklfn 27
                + +kg++e+A++l++
  MMETSP1325-20131115|6610_1 45 FESKGEFEKAVQLYQ 59
                6689*********97 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.019
   PF13041.1  13 lckkgkveeAfklfn 27 
                 + ++g++e+A++lf+
  MMETSP1325-20131115|6610_1 109 FIEHGHFEKAVQLFM 123
                 7799**********8 PP

>> PF10602.4  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.05        53      38      61 ..      37      60 ..      22      73 .. 0.86
   2 ?    7.0   0.0    0.0029         3      23      66 ..      86     129 ..      81     144 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.05
   PF10602.4 38 aledlaehYlkigdleeAlkaysr 61
                ++ + a ++ + g++e+A+++y++
  MMETSP1325-20131115|6610_1 37 LMVECAVYFESKGEFEKAVQLYQK 60
                678889999999*******99986 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0029
   PF10602.4  23 lkdakenlikesirraledlaehYlkigdleeAlkaysrardyc 66 
                 lk+  ++l +    ++  + ae+++++g +e+A+++++    y+
  MMETSP1325-20131115|6610_1  86 LKNIANDLDDQTSPQTVARCAEFFIEHGHFEKAVQLFMTGKRYV 129
                 67777888888888889999**************9876544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.55
# Mc/sec: 736.34
//
Query:       MMETSP1325-20131115|6612_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 361.71
//
Query:       MMETSP1325-20131115|6613_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|6614_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-09   35.4   0.2    1.3e-08   34.3   0.1    1.6  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.1   9.7e-13   1.3e-08       2      29 ..      40      67 ..      39      68 .. 0.87

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 9.7e-13
                --S.EEE.E.E----EEEEETTT--EESS CS
  PF00397.21  2 ppg.WeersddddGrvYYyNheTgetqWe 29
                p+  W++++d+  Gr YYyN+ T+e+ W+
  MMETSP1325-20131115|6614_1 40 PECkWKVAFDSH-GRRYYYNADTRESRWN 67
                6666**99*766.***************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 524.20
//
Query:       MMETSP1325-20131115|6617_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.9   0.0      0.084   12.9   0.0    1.6  1  PF00004.24 ATPase family associated with various cellular activities (AAA)


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   6.1e-06     0.084      88     131 ..       3      45 ..       1      46 [. 0.80

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.1e-06
                 HHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHHTTSCCEEE-- CS
  PF00004.24  88 qLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkieie 131
                 +L ++l +  + ++k++++ a+n+p+++d a+  +R+d+ +e++
  MMETSP1325-20131115|6617_1   3 ALNAFLYRTGEPTDKFMLVYASNQPEQFDWAVN-DRIDEMVEFD 45 
                 455555555555668******************.*****99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 737.34
//
Query:       MMETSP1325-20131115|6619_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.058   12.2   0.0       0.07   11.9   0.0    1.1  1  PF14067.1 LssY C-terminus


Domain annotation for each model (and alignments):
>> PF14067.1  LssY C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.1e-06      0.07       5      65 ..      11      66 ..       7      73 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 5.1e-06
   PF14067.1  5 rlklralpgrtrtldglpgdpvnvvliGtedqlrkalaaaGWieadkltlrsslkaagsll 65
                r+  +++p++++   g +   +nv ++G  +      +a GW+ + ++t ++++  a+  +
  MMETSP1325-20131115|6619_1 11 RISQTRVPRYAMFHRGRRLRLLNVLFVGLVA-----TEAEGWTPTRPATPATVWSCATRAA 66
                667789**********************766.....9****************99988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 365.99
//
Query:       MMETSP1325-20131115|6623_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       481  (0.0351814); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|6616_1  [L=321]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-59  199.4  14.1    7.8e-59  199.0   9.8    1.0  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
      0.043   13.5   0.4      0.093   12.4   0.3    1.5  1  PF04422.8  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.0   9.8   1.1e-62   7.8e-59     138     397 ..       4     299 ..       2     301 .. 0.87

  Alignments for each domain:
  == domain 1    score: 199.0 bits;  conditional E-value: 1.1e-62
                 ---TTT----..............------TTHHHHHH----------------...........--S--GSBHHHHH---HHHH--------------SHHHHH...HHHHHHHHHHHHH-------TTT---......-----------------TTT------------------------CHHHHHHTS-HTTGG-----------------TTSTT--.......-----------...-HHHHHHHHHHHHHHH---TTT---HHHHHH---B-XHHHHHXXXHHHHXXXX CS
  PF00909.16 138 ggwlaklgvl.............iDfAgstvVHlvggvagLaaalvlgkregrfe........gkeeaikghnlpfavlGtllLwfgWfgFNagsaltankrara..raavtTllAaaagaltallisrlkegk......invlglanGilAGlVAiTaacavvepwgAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv.......askisggllsgeg.kqlvvqligilvilayafvvtlilllllklllgLrvseeeeevglDvaehget 397
                 ggw++ ++               iDfAgs+vVH++gg+a+L++  +lg r+ r +          ++  + +  +f +lG+l+Lw+gW+gFN++s+l + +      +++vtT++Aa +ga+t+l++ +l +gk      +++ ++ nG+lAGlVAiTa c++ ep+gA++iG++A ++++ g++++    kidD++++++vHg++G+ G+++ + fa+++ +        ++  +g+++g+  + + + ++  l+i+a++ v++ i++  l+++  Lrv+++ ee g+D +ehg t
  MMETSP1325-20131115|6616_1   4 GGWASAWKSAdtddnpllfgcgvIDFAGSGVVHMTGGIAALVGSSFLGARKARQPepngpllsLPSDYAPEYGPIFQTLGVLILWMGWYGFNGASTLYLVNYGLVaaKTMVTTTIAAGTGAVTTLFMGSLMTGKvdgsfvLKLEDANNGVLAGLVAITAPCSTCEPYGAFLIGFMA-AFVYKGANAVLIACKIDDVVNAIPVHGFCGFFGVIMAACFATQDNYsaayysdRAEACAGIFYGGDgSAIAAAIVFLLAIIAWVSVLSGIIFGALSAAKILRVEAQVEEDGMDKSEHGVT 299
                 678888877778888888888888****************************99866433332223334556789*********************987664333357**************************5555555678889*****************************.777777778*********************************99889***9995666666676666699************************************************965 PP

>> PF04422.8  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   1.4e-05     0.093      16      43 ..     118     145 ..     107     167 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.4e-05
   PF04422.8  16 kaqdGGiVTallayaLeeglvDgvivva 43 
                  a  +G+VT+l++  L +g vDg  v++
  MMETSP1325-20131115|6616_1 118 IAAGTGAVTTLFMGSLMTGKVDGSFVLK 145
                 56779******************99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       657  (0.0480544); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.51
# Mc/sec: 1508.30
//
Query:       MMETSP1325-20131115|6626_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 304.15
//
Query:       MMETSP1325-20131115|6627_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       84  (0.00614394); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|6631_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 253.73
//
Query:       MMETSP1325-20131115|6632_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|6630_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.84    8.6  30.8      0.042   12.9  13.9    2.0  2  PF09507.5 DNA polymerase subunit Cdc27


Domain annotation for each model (and alignments):
>> PF09507.5  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9  13.9   3.1e-06     0.042     233     337 ..       6     119 ..       2     139 .. 0.64
   2 ?    1.6   2.1     0.008   1.1e+02     269     302 ..     189     225 ..     157     237 .. 0.40

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.1e-06
   PF09507.5 233 keaseskvkeeseeesekedkaeedesaeslekeedekekeftks........ekkrqkrlessdseeete...ekekekrkrlkkmmedededeemeivpespqeeeeseesepp 337
                 + a+e+++++e++ +++ +++  +de+++++e++ +++e+  +          e   +++++ +d+eee +   e   ++rk l+  +ed d d  + i+p++++ee e  + + +
  MMETSP1325-20131115|6630_1   6 EPAKEEAPPAEKK-KKPRRRRMMDDEEPAKEEAKPKKEESTAKSGwgsptkggEAEGKEDGKAADEEEEAVtaaEAPTRRRKGLRDHEEDNDADV-VMIIPDLDEEEAEDLTAQVA 119
                 5677777788844.444455554666665555444444444333378887543222333444444444444777888889999***********9.9*******887777666554 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.008
   PF09507.5 269 ekekeftks..ekk.rqkrlessdseeeteekekekr 302
                 e++ e+  +  e+    k+ e  ++++e+ e  k+kr
  MMETSP1325-20131115|6630_1 189 ERKAEDAAAlkEEEgGDKEAENNNEAAEEAEGGKKKR 225
                 1111111111111111111111111111112222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1011  (0.0739468); expected 273.4 (0.02)
Passed bias filter:                      456  (0.0333528); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.39s 00:00:01.12 Elapsed: 00:00:00.48
# Mc/sec: 1203.17
//
Query:       MMETSP1325-20131115|6635_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-07   29.7   0.0    5.7e-07   29.1   0.0    1.3  1  PF00271.26 Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   4.2e-11   5.7e-07      36      78 .]      19      61 ..       4      61 .. 0.89

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 4.2e-11
                EEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26 36 vlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78
                 l+  + +++G++l+++++V+++d+ +++++++Q++ R++R+g
  MMETSP1325-20131115|6635_1 19 LLLPIKSGAEGLTLTEATHVMILDPLDNPAQMAQAVNRVHRIG 61
                56777899*********************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       506  (0.0370099); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.71
# Mc/sec: 347.64
//
Query:       MMETSP1325-20131115|6633_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 811.83
//
Query:       MMETSP1325-20131115|6636_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00026   20.2   0.0    0.00026   20.2   0.0    1.0  1  PF00026.18 Eukaryotic aspartyl protease


Domain annotation for each model (and alignments):
>> PF00026.18  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   1.9e-08   0.00026     104     145 ..       3      51 ..       1      59 [] 0.89

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 1.9e-08
                 S----B-E--GGG-S-B.........---HHHHHHHC--CSSSEEEE--- CS
                 xxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00026.18 104 kfdGilGlgfkeievge........tatpvfdtllsqglidepvFsvyln 145
                 +++Gi+Gl+f++++ ++        + tp+ dt++++g i+e +Fsv l 
  MMETSP1325-20131115|6636_1   3 NNKGIMGLAFSALSEDYcyddtcdvSSTPILDTMMDDGTIKE-AFSVQLC 51 
                 579************99*******99**************75.8**9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|6638_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.15   11.6   1.4       0.22   11.1   1.0    1.3  1  PF04360.7  Serglycin
       0.85    8.2   7.5          1    8.0   5.2    1.0  1  PF01611.11 Filovirus glycoprotein
        1.7    7.3  24.1          2    7.1  16.7    1.0  1  PF06075.7  Plant protein of unknown function (DUF936)
        1.7    7.7  20.8        2.5    7.1  14.4    1.3  1  PF10390.4  RNA polymerase II elongation factor ELL
        1.9    7.2   8.1        2.2    7.0   5.6    1.3  1  PF02535.17 ZIP Zinc transporter
        2.5    6.7  25.4        3.1    6.4  17.6    1.1  1  PF04514.7  Bluetongue virus non-structural protein NS2
        2.8    8.2  10.2        5.1    7.4   7.1    1.6  1  PF08316.6  Pal1 cell morphology protein
        3.3    5.7  30.9        4.1    5.4  21.4    1.1  1  PF06375.6  Bovine leukaemia virus receptor (BLVR)
        5.6    4.8  18.8        5.8    4.8  13.0    1.2  1  PF10221.4  Cell cycle and development regulator
        6.8    6.0  30.2         13    5.1  20.9    1.4  1  PF03286.9  Pox virus Ag35 surface protein
          7    4.6  19.5        7.9    4.4  13.5    1.1  1  PF09726.4  Transmembrane protein


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.0   0.00018      0.22      86     110 ..     124     149 ..      86     152 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00018
   PF04360.7  86 plsedysgsgsgsGsGsGs.gsGsGf 110
                 p   d s sgs s sGsGs g GsG+
  MMETSP1325-20131115|6638_1 124 PKRSDKSSSGSESDSGSGSdGEGSGS 149
                 66678899999999999983457776 PP

>> PF01611.11  Filovirus glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.2    0.0008         1     222     333 ..      19     126 ..       2     140 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0008
  PF01611.11 222 vdnttyvqlersltPqfLvqlnetikltnkrsnttgkliwtvdpsidsdiGewafwetkkvvtkqlqsesilstlslsprtknlsrqavaeldktrtslqpstnntteisti 333
                  d+++  + ++++ P+  ++++++        n     +  ++ +idsd  e +    kk+ +k+++s++  + + +++++k++ ++   +++++r + +p+ ++ ++ ++ 
  MMETSP1325-20131115|6638_1  19 RDKMEGERRKAEKRPREEMTAEQKAMALGSALNGQT--LLMMNEKIDSDDDEEERRREKKARKKEKKSKKSKKHKKEKKSKKEKKKK--KDKKRERSEKSPKRSSVERSPKR 126
                 555555555666666666666666655555555544..7889*******************99999999954444444444444443..45555555556655555554443 PP

>> PF06075.7  Plant protein of unknown function (DUF936)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  16.7    0.0016         2     193     294 ..      25     137 ..       5     147 .. 0.64

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0016
   PF06075.7 193 espkkrkslpsss..arrrseigs.kalrgsaslrkkvavksag........eskpkskskdaksaprkksssaksPsksekteekaekrlsklseraspkdtskssksekae 294
                 e++k  k+ + ++  +++++ +gs    ++  ++ +k ++++ +        ++k+++ksk++k+  ++k+s+++++ k++k++e++ek++++ s+++spk ++kss+ +++ 
  MMETSP1325-20131115|6638_1  25 ERRKAEKRPREEMtaEQKAMALGSaLNGQTLLMMNEKIDSDDDEeerrrekkARKKEKKSKKSKKHKKEKKSKKEKKKKKDKKRERSEKSPKRSSVERSPKRSDKSSSGSESD 137
                 33333333333333345667777756666555555555555544455444446666666666666666667777777777789999***************999998876655 PP

>> PF10390.4  RNA polymerase II elongation factor ELL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  14.4     0.002       2.5     114     187 ..      65     136 ..      52     153 .] 0.63

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.002
   PF10390.4 114 tdDsyqktrermaqaeeeeksketkeikpnqkdigkkvklkkplskasssspnaksskqssPkngssssrkang 187
                  dD  ++ r   +++ +e+ksk++k+ k+++k  ++k+k+k ++ ++s++sp  +ss + sPk++ +ss  +++
  MMETSP1325-20131115|6638_1  65 DDDE-EERRREKKARKKEKKSKKSKKHKKEKKSKKEKKKKKDKKRERSEKSP-KRSSVERSPKRSDKSSSGSES 136
                 3333.34444445577778888888888888888877777777777777777.667777777755554443333 PP

>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   5.6    0.0018       2.2     110     151 ..      74     118 ..      12     145 .. 0.46

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0018
  PF02535.17 110 hgegrghdkehsettsdeaskskes...kvenaeseeeeteeees 151
                  +++r+++k+++++++++++k++++   k++ ++ e++e++ + s
  MMETSP1325-20131115|6638_1  74 EKKARKKEKKSKKSKKHKKEKKSKKekkKKKDKKRERSEKSPKRS 118
                 111111111111111111111111111122222222222222222 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  17.6    0.0025       3.1     150     267 ..      11     137 ..       6     150 .. 0.55

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0025
   PF04514.7 150 sdvdvrelRqkireeRekekeklerklaikee.rlmespdsdedeakldeeakemtpetskqekeeerreavekrle.erveklkldleekredlkkeqeeeekvetesdde.......deegedse 267
                 s+ ++  +R k+  eR k++++ +++++ +++    +s+ + +    ++e+ ++   e +++ ++++r+++ + +   +++++ k + e+k++++kk++++e++ +++s +          +g++s+
  MMETSP1325-20131115|6638_1  11 SQKEIDGYRDKMEGERRKAEKRPREEMTAEQKaMALGSALNGQTLLMMNEKIDSDDDEEERRREKKARKKEKKSKKSkKHKKEKKSKKEKKKKKDKKRERSEKSPKRSSVERspkrsdkSSSGSESD 137
                 66788899*****999999888877777777634455666666667777777666555555555544444433333303333334455555555555555555544444443333322222222222 PP

>> PF08316.6  Pal1 cell morphology protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   7.1    0.0041       5.1      19     107 ..      16     106 ..       5     149 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0041
   PF08316.6  19 DGPfDAvtPhRNknkkkaPvaaFpkdsannslggagetnkksdlnevfgreeeedekevsslkkeksesssetkdaik...kkskevtefda 107
                 DG  D ++ +R k  +k P +   ++ ++++lg a + ++   +ne +  +++e+e++ ++++++k+++s+++k+  k   +k+++ ++ d 
  MMETSP1325-20131115|6638_1  16 DGYRDKMEGERRKA-EKRPREEMTAEQKAMALGSALNGQTLLMMNEKIDSDDDEEERRREKKARKKEKKSKKSKKHKKekkSKKEKKKKKDK 106
                 66667777777555.567999999999*******9999999999999999998888744444333333333333333200022222233333 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  21.4    0.0033       4.1     213     310 ..      21     118 ..       7     136 .. 0.61

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0033
   PF06375.6 213 erdkdkkkevekfkdlllalddspaaaasvleedevslav.tvlkeaqeeereenkdakaeeskkssktkkkkqrkekeekkkkkkkskkrchqseeaa 310
                 + + +++k  ek    +++ ++   a  s+l+ +   + +  + ++ +eeer ++k+a+++e k   ++k+kk++k k+ekkkkk+k+++r+++s ++ 
  MMETSP1325-20131115|6638_1  21 KMEGERRK-AEKRPREEMTAEQKAMALGSALNGQTLLMMNeKIDSDDDEEERRREKKARKKEKKSKKSKKHKKEKKSKKEKKKKKDKKRERSEKSPKRS 118
                 22222222.333334445666666666777776665554415566667777778888877777766777777888888888888888888877665543 PP

>> PF10221.4  Cell cycle and development regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  13.0    0.0047       5.8     563     638 ..      61     138 ..      12     149 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0047
   PF10221.4 563 ttrsadkele.eddeavdkrfvkeeffeksseaads.erlksvsdeeeeeleesekikdspdspeilekkkkvkveek 638
                 ++ s d e+e  ++++++k++ k ++ +k+++ ++s ++ k+ +d+  e  e+s+k    + sp++++k+++ + +++
  MMETSP1325-20131115|6638_1  61 KIDSDDDEEErRREKKARKKEKKSKKSKKHKKEKKSkKEKKKKKDKKRERSEKSPKRSSVERSPKRSDKSSSGSESDS 138
                 334444444445667777888887777775554444045667788888888999999999999999999988766655 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  20.9      0.01        13       9     118 ..       7     136 ..       3     150 .. 0.66

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.01
   PF03286.9   9 sggdnfktLeeiRahlrseaenad.kveddifpeDi..................eiPvsekkpkkkr.kttkrkpvkkkkskkkekekeeeeekkeeededkdteenendddekeeskdskesasaneqs 118
                 ++g + k ++  R+++  e  +a+ ++++++ +e                    +i + + +++++r k +++k+ k kkskk++kek+ ++ekk+++d++++  e++ + ++ e s + ++++s+ ++s
  MMETSP1325-20131115|6638_1   7 NTGTSQKEIDGYRDKMEGERRKAEkRPREEMTAEQKamalgsalngqtllmmneKIDSDDDEEERRReKKARKKEKKSKKSKKHKKEKKSKKEKKKKKDKKRERSEKSPKRSSVERSPKRSDKSSSGSES 136
                 5666666667777776666666653456666666333455666666666766667775444444444377888888999999999999999999999999998888888777777776666555555554 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  13.5    0.0064       7.9     310     388 ..      58     136 ..       6     152 .. 0.59

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0064
   PF09726.4 310 sseslagsaeelalkkdsnsssaeeksakskssksaktskrsksnsspkshksaagsvssssvkkneskdkkasksssg 388
                  +e + ++ +e + ++++++  +e+ks+ksk++k++k+sk++k +++ k+ ++++ s + ssv+++ ++++k+s+ s+ 
  MMETSP1325-20131115|6638_1  58 MNEKIDSDDDEEERRREKKARKKEKKSKKSKKHKKEKKSKKEKKKKKDKKRERSEKSPKRSSVERSPKRSDKSSSGSES 136
                 3444555566666666666777777777777777777777776666666666666666666666665554444443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2738  (0.200263); expected 273.4 (0.02)
Passed bias filter:                      961  (0.0702896); expected 273.4 (0.02)
Passed Vit filter:                       352  (0.0257461); expected 13.7 (0.001)
Passed Fwd filter:                       116  (0.00848449); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.70u 0.51s 00:00:02.21 Elapsed: 00:00:00.96
# Mc/sec: 381.92
//
Query:       MMETSP1325-20131115|6639_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|6640_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       564  (0.0412522); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.40s 00:00:01.07 Elapsed: 00:00:00.49
# Mc/sec: 1648.11
//
Query:       MMETSP1325-20131115|6647_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   13.2   5.8      0.066   13.1   4.0    1.1  1  PF13945.1 Splicing factor, salt tolerance regulator
       0.21   10.4   4.1       0.24   10.2   2.8    1.0  1  PF08214.6 Histone acetylation protein
       0.44    9.1  13.0       0.47    9.0   9.0    1.0  1  PF10310.4 Protein of unknown function (DUF2413)
       0.72    7.9   7.1       0.73    7.9   4.9    1.1  1  PF06375.6 Bovine leukaemia virus receptor (BLVR)
       0.78    9.1  13.0       0.88    8.9   9.0    1.1  1  PF11861.3 Domain of unknown function (DUF3381)
        1.5    7.5  15.8        1.6    7.5  11.0    1.0  1  PF07767.6 Nop53 (60S ribosomal biogenesis)
        4.2    7.5  14.0          6    7.0   9.7    1.3  1  PF07741.8 Brf1-like TBP-binding domain


Domain annotation for each model (and alignments):
>> PF13945.1  Splicing factor, salt tolerance regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   4.0   3.4e-05     0.066       4      60 ..      16      73 ..      11      82 .] 0.60

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.4e-05
   PF13945.1  4 eseenaqeqsqqqqqeln.tvaesdsssskkkkkkkkkskatseslnasddstsesls 60
                e+ee+a ++++q  +el+  ++   s++sk+kkkk+kk++a++++ + + +  +   +
  MMETSP1325-20131115|6647_1 16 ETEEEAAQREEQLLKELEgLEVGMGSNTSKNKKKKEKKRRAKEAAAKREAEAAAAEAE 73
                4555555555554566663445566788888888888888888887777765543333 PP

>> PF08214.6  Histone acetylation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.8   0.00012      0.24     249     308 ..      15      75 ..       4      81 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00012
   PF08214.6 249 dqfweelafrqEfslgrlvgfigl.vikpkklvkskkqykkikkaikkeeydseesaqelv 308
                 ++ +ee a+r+E  l++l g+      +++k++k+k++++++k+a+ k+e + + +++e+ 
  MMETSP1325-20131115|6647_1  15 EETEEEAAQREEQLLKELEGLEVGmGSNTSKNKKKKEKKRRAKEAAAKREAEAAAAEAEAA 75 
                 444677899***********86542445578888888999999998888887777776655 PP

>> PF10310.4  Protein of unknown function (DUF2413)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   9.0   0.00024      0.47      17      86 ..      11      77 ..       3      82 .] 0.51

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00024
   PF10310.4 17 kkkkskaskkstkkdediLefLdeleksekakkkkkaeeaekaetprvekkkskkkesekaskeekeakp 86
                 + k ++++++++ +e +L++L+ le    +++ k +++++ +++ r +k+ + k+e e+a++e ++a++
  MMETSP1325-20131115|6647_1 11 TTAKEETEEEAAQREEQLLKELEGLEVGMGSNTSK-NKKKK-EKKRR-AKEAAAKREAEAAAAEAEAAAA 77
                34566667789999***********9854444433.22222.22222.3333333333333333333322 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.9   0.00037      0.73     188     222 ..      33      67 ..       2      82 .] 0.42

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00037
   PF06375.6 188 ekedvplvekkskkkkkkekkekekerdkdkkkev 222
                 e  +v + ++ sk kkkkekk + ke   ++  e 
  MMETSP1325-20131115|6647_1  33 EGLEVGMGSNTSKNKKKKEKKRRAKEAAAKREAEA 67 
                 33333344444444444444443333333222222 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   9.0   0.00045      0.88     102     153 ..      10      66 ..       2      72 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00045
   PF11861.3 102 ekeeeeeeeeveekdeeeqideelk......ellekelakekreerrenerkqkeilk 153
                 + + ++ee+e+e+ + eeq+ +el+        ++ +++k+k+++rr++e + k++++
  MMETSP1325-20131115|6647_1  10 A-TTAKEETEEEAAQREEQLLKELEglevgmGSNTSKNKKKKEKKRRAKEAAAKREAE 66 
                 3.45566777777777777777777554443478888888888888888888888776 PP

>> PF07767.6  Nop53 (60S ribosomal biogenesis)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  11.0   0.00081       1.6     243     303 ..      13      75 ..       2      82 .] 0.48

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00081
   PF07767.6 243 eeddeeeeesedesekegfdseke..lsinkpvknkrKtkaqRnkekrrkelekeakeekelk 303
                 ++++ eee++++e++  ++ +  e     n ++++k+K k+ R+ke+++k++ + a++e+e+ 
  MMETSP1325-20131115|6647_1  13 AKEETEEEAAQREEQLLKELEGLEvgMGSNTSKNKKKKEKKRRAKEAAAKREAEAAAAEAEAA 75 
                 222222222233333223333333434445555566666666667777777666666666554 PP

>> PF07741.8  Brf1-like TBP-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   9.7    0.0031         6      26      66 ..      14      70 ..       7      81 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0031
                HHHHHHHHHCCCCT-XXXXXX.......XXXXXXXXXXXXXXXXXX.........XX CS
   PF07741.8 26 kdyleeqeakelkakadaatg.......nksrkkkkkrkakkkkne.........aa 66
                k+  ee++a+++++  ++ +g       n+s++kkkk+k++++k+          aa
  MMETSP1325-20131115|6647_1 14 KEETEEEAAQREEQLLKELEGlevgmgsNTSKNKKKKEKKRRAKEAaakreaeaaAA 70
                455566777777777777666999999877777777777777776444443322222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2123  (0.155281); expected 273.4 (0.02)
Passed bias filter:                     1088  (0.0795787); expected 273.4 (0.02)
Passed Vit filter:                       158  (0.0115565); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.49s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 385.30
//
Query:       MMETSP1325-20131115|6641_1  [L=645]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-17   61.7  22.0      0.023   14.8   0.0    8.8  9  PF01851.17 Proteasome/cyclosome repeat
    2.3e-15   56.5   6.6    2.9e-09   36.9   0.5    3.5  4  PF13646.1  HEAT repeats
    1.2e-05   24.9   0.3       0.93    9.6   0.0    4.5  4  PF02985.17 HEAT repeat
     0.0019   18.6   9.5      0.051   14.0   0.3    4.4  5  PF13513.1  HEAT-like repeat
  ------ inclusion threshold ------
      0.044   12.8   0.0      0.091   11.7   0.0    1.6  1  PF09268.5  Clathrin, heavy-chain linker
        2.4    8.0  20.9        3.8    7.3  14.5    1.2  1  PF08432.5  Fungal protein of unknown function (DUF1742)
        8.8    4.0   9.1         12    3.6   6.3    1.1  1  PF02724.9  CDC45-like protein
        9.1    5.4  11.2         14    4.8   7.8    1.2  1  PF03839.11 Translocation protein Sec62


Domain annotation for each model (and alignments):
>> PF01851.17  Proteasome/cyclosome repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.026        45       1      29 [.      57      86 ..      57      91 .. 0.85
   2 !    6.6   0.0    0.0054       9.2       1      11 [.      97     107 ..      97     127 .. 0.87
   3 !   11.0   0.2   0.00021      0.36       1      32 [.     137     168 ..     137     171 .. 0.92
   4 !   14.8   0.0   1.4e-05     0.023       1      34 [.     172     210 ..     172     211 .. 0.93
   5 ?   -0.6   0.0       1.1   1.8e+03      10      28 ..     220     238 ..     213     245 .. 0.70
   6 !   11.5   0.1   0.00015      0.26       2      34 ..     248     281 ..     247     282 .. 0.78
   7 ?   -1.8   0.0       2.4   4.2e+03      18      34 ..     302     314 ..     288     315 .. 0.69
   8 !   14.7   0.5   1.5e-05     0.025       1      35 []     317     355 ..     317     355 .. 0.86
   9 !    6.8   0.2    0.0045       7.6       1      22 [.     398     417 ..     398     429 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.026
  PF01851.17  1 GAalALGlihaGsgne.ealelLspylsdt 29
                +A++++G+ih   g   +  ++L+ yl+ +
  MMETSP1325-20131115|6641_1 57 SATASIGVIHRPKGLLsQSKQVLEAYLPRP 86
                69*********9999889999999998765 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0054
  PF01851.17   1 GAalALGliha 11 
                 G+++ALGliha
  MMETSP1325-20131115|6641_1  97 GSLYALGLIHA 107
                 889*******9 PP

  == domain 3    score: 11.0 bits;  conditional E-value: 0.00021
  PF01851.17   1 GAalALGlihaGsgneealelLspylsdtsne 32 
                 G +lA Gl  +G+ + + +e L+++l ++s+ 
  MMETSP1325-20131115|6641_1 137 GGCLAVGLSAMGTADKQLYETLKNILFNDSAI 168
                 89***********************9999886 PP

  == domain 4    score: 14.8 bits;  conditional E-value: 1.4e-05
  PF01851.17   1 GAalALGlihaGsgne.....ealelLspylsdtsnevr 34 
                 +Aa+++Gl+ +G  +      eal  L+ y++dt++e++
  MMETSP1325-20131115|6641_1 172 AAAYGIGLLLLGQSRPdgwtaEALTELLAYAHDTQHEKI 210
                 7***********77779*******************986 PP

  == domain 5    score: -0.6 bits;  conditional E-value: 1.1
  PF01851.17  10 haGsgneealelLspylsd 28 
                  a +g+eea e L + l+ 
  MMETSP1325-20131115|6641_1 220 LASYGREEAAETLIETLAR 238
                 4668888888888777665 PP

  == domain 6    score: 11.5 bits;  conditional E-value: 0.00015
  PF01851.17   2 AalALGlihaGsgne.ealelLspylsdtsnevr 34 
                 A + +Gl++aG+g + +++ lL+  +sd s++vr
  MMETSP1325-20131115|6641_1 248 AMYTIGLAYAGTGANgAVRRLLHVAVSDVSDDVR 281
                 55559**********8888888866777777776 PP

  == domain 7    score: -1.8 bits;  conditional E-value: 2.4
  PF01851.17  18 alelLspylsdtsnevr 34 
                  ++    +l++++n+++
  MMETSP1325-20131115|6641_1 302 LVA----LLAESYNPHV 314
                 444....5559999997 PP

  == domain 8    score: 14.7 bits;  conditional E-value: 1.5e-05
  PF01851.17   1 GAalALGlihaG.sgne...ealelLspylsdtsnevra 35 
                 GAalALG++ aG   +e    al +Ls++ +dt+++vr+
  MMETSP1325-20131115|6641_1 317 GAALALGIALAGqAATEagaTALTMLSSMHDDTVDFVRQ 355
                 9***********55555**99999999997799999885 PP

  == domain 9    score: 6.8 bits;  conditional E-value: 0.0045
  PF01851.17   1 GAalALGlihaGsgneealelL 22 
                 GA+lA Gl++aG g++ ++  L
  MMETSP1325-20131115|6641_1 398 GAVLAHGLLDAG-GRN-VTLSL 417
                 9***********.999.55555 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.019        33      12      76 ..      90     167 ..      79     178 .. 0.77
   2 !   16.7   0.3   3.3e-06    0.0057      31      87 ..     190     252 ..     118     253 .. 0.66
   3 !   27.1   1.8     2e-09   3.4e-06       3      88 .]     194     289 ..     191     289 .. 0.80
   4 !   36.9   0.5   1.7e-12   2.9e-09       4      84 ..     268     358 ..     265     363 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.019
   PF13646.1  12 pdpevraaaieaLgqlgseea.......lpaLlelLkd..sdpevRraAaeaLg..klg..dpealpaLlkllddded 76 
                 ++p+     ++aLg ++ ++a       +p Lle L++  +++ +++  + a g  ++g  d++ +++L+  l +d+ 
  MMETSP1325-20131115|6641_1  90 SSPYSEGGSLYALGLIHAAKAgdseegvIPYLLETLSNagPNEPLQHGGCLAVGlsAMGtaDKQLYETLKNILFNDSA 167
                 5666666778999988888777777777********654489999999999887557774467789999999999864 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 3.3e-06
   PF13646.1  31 ealpaLlelLkdsdpevRraAaeaLgkl......gdpealpaLlklldddedavvreaaaeaL 87 
                  + +aL+elL   +    +++++aLg        g +ea ++L++ l++d da++r  a++++
  MMETSP1325-20131115|6641_1 190 WTAEALTELLAYAHDTQHEKIIRALGIAaalasyGREEAAETLIETLARDRDAIIRYGAMYTI 252
                 336777777755555555555555553322233389999999999999999999998887765 PP

  == domain 3    score: 27.1 bits;  conditional E-value: 2e-09
   PF13646.1   3 aLlaaLekdpdpevraaaieaLg......qlgseealpaLlelL.kdsdpevRraAaeaLgkl....gdpealpaLlklldddedavvreaaaeaLg 88 
                 aL ++L   +++   +++i+aLg       +g eea ++L+e L +d d+ +R  A + +g      g + a++ Ll  + +d ++ vr+aa+ +Lg
  MMETSP1325-20131115|6641_1 194 ALTELL-AYAHDTQHEKIIRALGiaaalaSYGREEAAETLIETLaRDRDAIIRYGAMYTIGLAyagtGANGAVRRLLHVAVSDVSDDVRRAAVTNLG 289
                 555555.5555566666777777777666999**********8869************9994434447899**********************9985 PP

  == domain 4    score: 36.9 bits;  conditional E-value: 1.7e-12
   PF13646.1   4 LlaaLekdpdpevraaaieaLg..qlgseealpaLlelL.kdsdpevRraAaeaLgkl........gdpealpaLlklldddedavvreaaa 84 
                 Ll  +++d +++vr+aa+  Lg   +++++ lp+L++lL ++++p vR  Aa aLg          +   al  L   + dd+ + vr+ a+
  MMETSP1325-20131115|6641_1 268 LLHVAVSDVSDDVRRAAVTNLGfvLFRQADRLPPLVALLaESYNPHVRYGAALALGIAlagqaateAGATALTMLS-SMHDDTVDFVRQGAL 358
                 6777789***************9999999**********89***************74454432211233444444.588899999998876 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0       0.5   8.5e+02       4      25 ..     232     253 ..     230     254 .. 0.88
   2 !    8.2   0.1    0.0015       2.6       9      25 ..     273     289 ..     265     292 .. 0.86
   3 !    9.6   0.0   0.00055      0.93       2      25 ..     299     323 ..     299     326 .. 0.86
   4 ?   -1.2   0.0       1.6   2.7e+03       9      21 ..     346     358 ..     339     360 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.5
                 HHHHHHTSSSHHHHHHHHHHHH CS
  PF02985.17   4 lllkllnDpspeVReaAaeaLg 25 
                 l+++l +D ++ +R+ A +++g
  MMETSP1325-20131115|6641_1 232 LIETLARDRDAIIRYGAMYTIG 253
                 5778999**********99987 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0015
                 HTSSSHHHHHHHHHHHH CS
  PF02985.17   9 lnDpspeVReaAaeaLg 25 
                  +D s +VR+aA+++Lg
  MMETSP1325-20131115|6641_1 273 VSDVSDDVRRAAVTNLG 289
                 6899**********998 PP

  == domain 3    score: 9.6 bits;  conditional E-value: 0.00055
                 HHHHHHHHT.SSSHHHHHHHHHHHH CS
  PF02985.17   2 lPlllklln.DpspeVReaAaeaLg 25 
                 lP+l+ ll  + +p+VR+ Aa aLg
  MMETSP1325-20131115|6641_1 299 LPPLVALLAeSYNPHVRYGAALALG 323
                 789998888455************8 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 1.6
                 HTSSSHHHHHHHH CS
  PF02985.17   9 lnDpspeVReaAa 21 
                   D+   VR+ A+
  MMETSP1325-20131115|6641_1 346 HDDTVDFVRQGAL 358
                 34779****9887 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.58   9.9e+02       8      39 ..      99     127 ..      97     144 .. 0.59
   2 ?   -2.0   0.0       3.1   5.3e+03       4      41 ..     135     166 ..     132     168 .. 0.70
   3 ?   -3.2   0.1       7.7   1.3e+04       6      14 ..     172     181 ..     171     200 .. 0.58
   4 !    6.6   0.0    0.0062        11       8      53 ..     211     253 ..     205     254 .. 0.86
   5 !   14.0   0.3     3e-05     0.051       3      53 ..     280     323 ..     278     325 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.58
   PF13513.1   8 awaLGrlaggeprllepavpellpaLlelLed 39 
                 ++aLG      +  + +  + ++p+Lle L++
  MMETSP1325-20131115|6641_1  99 LYALGL---IHAAKAGDSEEGVIPYLLETLSN 127
                 677774...33445555556667777766654 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 3.1
   PF13513.1   4 RraAawaLGrlaggeprllepavpellpaLlelLeddd 41 
                 +++ ++a+G         + +a ++l++ L + L +d+
  MMETSP1325-20131115|6641_1 135 QHGGCLAVG------LSAMGTADKQLYETLKNILFNDS 166
                 566666665......55677888999999998886665 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 7.7
   PF13513.1   6 aAawaLGr.l 14 
                 aAa+++G  l
  MMETSP1325-20131115|6641_1 172 AAAYGIGLlL 181
                 7777776542 PP

  == domain 4    score: 6.6 bits;  conditional E-value: 0.0062
   PF13513.1   8 awaLGrlaggeprllepavpellpaLlelLeddddeV.ReaAawALg 53 
                 ++aL    g ++ l++   +e+ + L+e L+ d+d + R  A +++g
  MMETSP1325-20131115|6641_1 211 IRAL----GIAAALASYGREEAAETLIETLARDRDAIiRYGAMYTIG 253
                 6789....677789999999**********99999888****99987 PP

  == domain 5    score: 14.0 bits;  conditional E-value: 3e-05
   PF13513.1   3 vRraAawaLGrlaggeprllepavpellpaLlelL.edddd.eVReaAawALg 53 
                 vRraA+  LG   ++  r++       lp+L++lL e+  + +VR  Aa+ALg
  MMETSP1325-20131115|6641_1 280 VRRAAVTNLG---FVLFRQAD-----RLPPLVALLaESY-NpHVRYGAALALG 323
                 9********8...44455555.....5555555553444.36**********9 PP

>> PF09268.5  Clathrin, heavy-chain linker
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.3e-05     0.091       1      15 [.     114     128 ..     114     129 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5.3e-05
   PF09268.5   1 eetIiPYIlnqLnNp 15 
                 ee++iPY l +L+N 
  MMETSP1325-20131115|6641_1 114 EEGVIPYLLETLSNA 128
                 89************6 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  14.5    0.0022       3.8      47     125 ..     480     558 ..     473     586 .. 0.57

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0022
   PF08432.5  47 qFatPivdaeaeeakkkkkelkeeiekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekekekeeeekaeel 125
                 +Fa P+++++++e+kk++ e+ +  +  k++  +++k k ekk++   + ++ +++k+ ++d+++ke+e+e+++k  e 
  MMETSP1325-20131115|6641_1 480 KFAYPKMTEAKKEEKKERVETVKLSTTAKAQARAAKKEKDEKKAEDAMDADDGSEEKKAEGDEEKKEDEPEKKKKGPEP 558
                 7888888888888887777777777777777777777666666654333222333333334555555555544443332 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   6.3    0.0072        12     112     183 ..     491     557 ..     476     599 .. 0.46

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.0072
   PF02724.9 112 ekeeeerdayealvemkeeeeeesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsne 183
                 ++e++er    +l+++ + +    ++++d++  + e+ ++a+   + +++++ e+d++++++++e++k+  e
  MMETSP1325-20131115|6641_1 491 KEEKKERVETVKLSTTAKAQARAAKKEKDEK--KAEDAMDAD---DGSEEKKAEGDEEKKEDEPEKKKKGPE 557
                 2222222233333222222222222222222..222222222...222333333344444444444444444 PP

>> PF03839.11  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   7.8    0.0081        14      21      82 ..     487     553 ..     475     598 .. 0.57

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0081
  PF03839.11  21 ykkekdkkkaeiaetkkskkeeskekkkekakeekkdteaee.....vdkelkkeekkeekkkkkkk 82 
                 ++++k+ kk++++ +k s   + + ++ +k+k+ekk+++a++     ++k+++++e+k+e++ +kkk
  MMETSP1325-20131115|6641_1 487 TEAKKEEKKERVETVKLSTTAKAQARAAKKEKDEKKAEDAMDaddgsEEKKAEGDEEKKEDEPEKKK 553
                 2233333333333444455555555555555555555555440000034445555554444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (645 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1281  (0.0936951); expected 273.4 (0.02)
Passed bias filter:                      588  (0.0430076); expected 273.4 (0.02)
Passed Vit filter:                       111  (0.00811878); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.37u 0.36s 00:00:01.73 Elapsed: 00:00:00.59
# Mc/sec: 2619.75
//
Query:       MMETSP1325-20131115|6625_1  [L=743]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0084   15.7   0.0          3    7.7   0.0    2.8  2  PF00514.18 Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.0    0.0016        21       3      22 ..     368     387 ..     366     403 .. 0.79
   2 !    7.7   0.0   0.00022         3      28      40 ..     444     456 ..     440     457 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0016
                 HHHHHHHHCHHHHHHHHHHC CS
  PF00514.18   3 enkqavieaGavppLvqLLk 22 
                 e+++a+ ++G+v+ Lv++L 
  MMETSP1325-20131115|6625_1 368 EHRMAMHKCGVVDTLVKFLE 387
                 67777779***********8 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.00022
                 HHHHHHHHHHHHH CS
  PF00514.18  28 vqeeAawALsNLa 40 
                 +++eAa++L+NLa
  MMETSP1325-20131115|6625_1 444 IRREAARTLRNLA 456
                 89**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (743 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.07u 0.34s 00:00:01.41 Elapsed: 00:00:00.61
# Mc/sec: 2918.84
//
Query:       MMETSP1325-20131115|6648_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 418.27
//
Query:       MMETSP1325-20131115|6649_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.8   0.0       0.25   10.9   0.0    1.4  1  PF04367.8 Protein of unknown function (DUF502)


Domain annotation for each model (and alignments):
>> PF04367.8  Protein of unknown function (DUF502)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.9e-05      0.25      35      77 ..     129     171 ..     117     175 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.9e-05
   PF04367.8  35 PlvrsiYssvkqlvetllgdkkksfkkvvlveyprkgvwalgf 77 
                 P vrs+Y+++k+ v+++ +d+ + ++  + v +pr  ++ +g+
  MMETSP1325-20131115|6649_1 129 PHVRSLYEASKKYVAQIDKDNATGKHAIMKVLLPRIPLYGFGM 171
                 99********************999999999999988887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.42s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|6651_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-05   24.1   0.3    4.4e-05   23.0   0.1    1.6  2  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.019   13.7   0.0       0.02   13.6   0.0    1.0  1  PF07433.6  Protein of unknown function (DUF1513)


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.47   3.2e+03      12      17 ..      22      27 ..      14      28 .. 0.69
   2 !   23.0   0.1   6.5e-09   4.4e-05       7      29 ..      38      60 ..      32      60 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.47
                SSEEEE CS
  PF00400.27 12 spVtcv 17
                 +V+c+
  MMETSP1325-20131115|6651_1 22 VAVSCI 27
                467887 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 6.5e-09
                EESSSSSEEEEEEESSSTEEEEE CS
  PF00400.27  7 lrgHtspVtcvafspdgpllasg 29
                 +gH + +tc+a+s+d++++a+g
  MMETSP1325-20131115|6651_1 38 HSGHDDDITCLAISQDRQFVATG 60
                48********************8 PP

>> PF07433.6  Protein of unknown function (DUF1513)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     3e-06      0.02      12      53 ..      16      57 ..       8      62 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3e-06
   PF07433.6 12 aspsdeeavvvaRrPgtfalvldpqsgeelqtlaaeedrhFy 53
                ++++++ av   RrP++f+ v++  ++++++ la ++dr+F 
  MMETSP1325-20131115|6651_1 16 VDKASKVAVSCIRRPASFSQVFHSGHDDDITCLAISQDRQFV 57
                566788899999*****************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|6652_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|6653_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.3e-11   41.6   0.0    1.5e-10   40.8   0.0    1.4  1  PF04536.9 Repair protein


Domain annotation for each model (and alignments):
>> PF04536.9  Repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   1.1e-14   1.5e-10       6     119 .]       8     123 ..       3     123 .. 0.93

  Alignments for each domain:
  == domain 1    score: 40.8 bits;  conditional E-value: 1.1e-14
                 HHHHH---HHHHHHTT----EEEEESB---..--HHHHHHHHHHH------S-----EEEEETTTTEEEEE-------------HHHHHHHTHHHHH------------HHHHHHH CS
   PF04536.9   6 erarleaavaelekktsgeivvvtvdslgd..esiedyaldlfrewgigkteddtgvLlvvslaerkveievgrglegkvpdafwdeilaelvpgfkagryaeGlaaaveaigall 119
                  ++ +e a +++  + ++ +vvvt +++++    +++++++l ++w  +k +++tgv++++ +++r++e+ v r+l+g++++a ++++l++ v  + +    +Gl++ +eai+++l
  MMETSP1325-20131115|6653_1   8 SARAIEMASKRVRVHAGADVVVVTLPRIEGggPAAKRFSNELLKQWCGNKWHKQTGVVVLLLTEDRRIEVGVTRNLNGVMSRAWVETTLKRDVVPVLNAAPGAGLVTLLEAIEQKL 123
                 5688999*********************8777999************99*******************************************8888888*************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1212.56
//
Query:       MMETSP1325-20131115|6654_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       803  (0.0587332); expected 273.4 (0.02)
Passed bias filter:                      573  (0.0419105); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 354.85
//
Query:       MMETSP1325-20131115|6658_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        83  (0.0060708); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.37s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 186.92
//
Query:       MMETSP1325-20131115|6659_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   14.5   0.0        5.9    6.4   0.0    2.1  2  PF01465.15 GRIP domain


Domain annotation for each model (and alignments):
>> PF01465.15  GRIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0   0.00047       6.4       2      20 ..       5      23 ..       4      30 .. 0.80
   2 ?    6.4   0.0   0.00043       5.9      31      44 ..      53      66 ..      40      68 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00047
  PF01465.15  2 ganleYLKNVllqFLeqke 20
                 ++l++LK+ +l F+ ++ 
  MMETSP1325-20131115|6659_1  5 MVELAHLKCAVLEFMRSSA 23
                57999**********8875 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.00043
  PF01465.15 31 istlLkFseeekqk 44
                ++ lL+F+++e++ 
  MMETSP1325-20131115|6659_1 53 VARLLHFNKQEEKA 66
                789********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 523.29
//
Query:       MMETSP1325-20131115|6660_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 557.61
//
Query:       MMETSP1325-20131115|6655_1  [L=1125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-05   23.5   0.0    0.00011   22.3   0.0    1.7  1  PF13495.1  Phage integrase, N-terminal SAM-like domain
  ------ inclusion threshold ------
      0.088   12.8   2.5        1.2    9.2   0.1    3.0  3  PF02899.12 Phage integrase, N-terminal SAM-like domain


Domain annotation for each model (and alignments):
>> PF13495.1  Phage integrase, N-terminal SAM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.6e-08   0.00011      14      79 ..     534     616 ..     501     620 .. 0.86

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 1.6e-08
   PF13495.1  14 ysekTekaYlswvkrflrflkkk.........speelteedv..........eaylnyLanerkvspstvnqalsaLsflfrevl 79 
                   ++T ++ +s++krfl ++k +          p  lt + v          e+y+++L+ +r v +++v ++ ++L +l   v 
  MMETSP1325-20131115|6655_1 534 VLPTTVESDISTLKRFLGWMK-DyrdrsaddgDPPALTMAAVvgsphlgkwcEEYITWLR-SREVGWASVANYTNSLYSLLTFVA 616
                 5589****************9.334566666656777777779*****************.****************99988775 PP

>> PF02899.12  Phage integrase, N-terminal SAM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00018       1.2      37      82 ..     510     555 ..     496     557 .. 0.86
   2 ?    2.0   0.1      0.03     2e+02      13      47 ..     595     626 ..     585     650 .. 0.71
   3 ?   -2.5   0.0      0.78   5.3e+03      11      44 ..     641     673 ..     633     687 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00018
  PF02899.12  37 gksaleqltaddvraflaellakglsaaslarrlsalrsffqflar 82 
                  k+ +e+lta+  ++  ++++ + + ++++   +s+l++f+ + ++
  MMETSP1325-20131115|6655_1 510 LKREIEALTARRTSEVCRHRAGRAVLPTTVESDISTLKRFLGWMKD 555
                 456899****************99******************9875 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.03
  PF02899.12  13 glspnTvraYrrdLkaflkflaergksaleqltad 47 
                 ++   +v++Y++ L ++l+f a+   s+   lt++
  MMETSP1325-20131115|6655_1 595 EVGWASVANYTNSLYSLLTFVAT---SDEFELTHE 626
                 44667899************999...665555555 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 0.78
  PF02899.12  11 erglspnTvraYrrdLkaflkflaergksaleql 44 
                 +   ++ T ++Yr++   ++++ a  + +  +++
  MMETSP1325-20131115|6655_1 641 QAHGHASTDKMYRKRDPNWMEWSAV-QETRMNAI 673
                 5555677777888777777777776.44444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.45u 0.41s 00:00:01.86 Elapsed: 00:00:00.76
# Mc/sec: 3547.24
//
Query:       MMETSP1325-20131115|6661_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-18   65.5   2.5    2.3e-11   43.7   0.3    2.4  2  PF13637.1  Ankyrin repeats (many copies)
    6.5e-18   64.7   2.4    7.2e-17   61.3   1.0    2.6  3  PF12796.2  Ankyrin repeats (3 copies)
    1.9e-16   59.5   3.9    1.3e-08   34.7   0.3    3.1  4  PF13857.1  Ankyrin repeats (many copies)
    1.8e-14   52.5   1.4    5.6e-07   28.9   0.3    3.7  4  PF00023.25 Ankyrin repeat
    1.1e-13   49.7   2.5    2.5e-06   27.0   0.2    3.6  4  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   4.8e-10   1.3e-06       2      54 .]      26      78 ..      25      78 .. 0.90
   2 !   43.7   0.3   8.5e-15   2.3e-11       1      54 []      58     111 ..      58     111 .. 0.97

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 4.8e-10
   PF13637.1  2 ltaLhyaaisgrlelvklLlekg.idinrtdesGntaLhiAalrgnieilklLl 54
                + ++h a+++  l+ +k  l+ + i++   d +Gn ++hiAa++g+ eil+lL+
  MMETSP1325-20131115|6661_1 26 WKPIHSACRWAKLPELKEKLNAKtIELADPD-NGNRLVHIAAQNGHQEILELLV 78
                789*****************87549987775.5******************996 PP

  == domain 2    score: 43.7 bits;  conditional E-value: 8.5e-15
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 g++++h aa+ g+ e+++lL++++ d+n+++++G taLh A+++ +++i++ Ll
  MMETSP1325-20131115|6661_1  58 GNRLVHIAAQNGHQEILELLVKNNCDVNAQNKKGQTALHMAVEYDYYWIARTLL 111
                 5899**********************************************9987 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.41   1.1e+03      57      72 ..      23      38 ..      12      52 .. 0.74
   2 !   61.3   1.0   2.6e-20   7.2e-17      17      88 ..      45     120 ..      29     121 .. 0.82
   3 ?    1.2   0.0      0.15   4.1e+02      33      49 ..     171     187 ..     146     204 .. 0.67

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.41
   PF12796.2 57 kegntpLhlAvrnghl 72
                 e + p+h A+r  +l
  MMETSP1325-20131115|6661_1 23 SEAWKPIHSACRWAKL 38
                5668899999986654 PP

  == domain 2    score: 61.3 bits;  conditional E-value: 2.6e-20
   PF12796.2  17 lekg....advdlgetpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                 l+++    ad+d g++ +h+Aa++g+ ei++lL+++++dvna++k+g+t+Lh+Av++  + +++ Ll++ga+ +++
  MMETSP1325-20131115|6661_1  45 LNAKtielADPDNGNRLVHIAAQNGHQEILELLVKNNCDVNAQNKKGQTALHMAVEYDYYWIARTLLDNGANGQIK 120
                 3333355578887999*******************************************************97766 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.15
   PF12796.2  33 AaeagnleivklLleag 49 
                 Aae ++ eiv++ ++++
  MMETSP1325-20131115|6661_1 171 AAEIDKAEIVQAFMKHK 187
                 33333333333333332 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.2   3.4e+03      18      30 ..      27      40 ..      20      45 .. 0.71
   2 !   34.7   0.3   4.6e-12   1.3e-08      15      54 ..      57      96 ..      50      96 .. 0.93
   3 !   33.0   0.2   1.5e-11   4.1e-08       7      50 ..      82     125 ..      81     128 .. 0.94
   4 ?   -2.7   0.0       2.7   7.3e+03      23      36 ..     171     184 ..     170     191 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.2
   PF13857.1 18 tpLhlAak.ggale 30
                 p+h A++ +  +e
  MMETSP1325-20131115|6661_1 27 KPIHSACRwAKLPE 40
                69999998666655 PP

  == domain 2    score: 34.7 bits;  conditional E-value: 4.6e-12
   PF13857.1 15 ggntpLhlAakggalevvrlLlapgadlnlrdsdgltald 54
                +gn + h+Aa +g++e+++lL+++++d n++++ g+tal+
  MMETSP1325-20131115|6661_1 57 NGNRLVHIAAQNGHQEILELLVKNNCDVNAQNKKGQTALH 96
                6889**********************************96 PP

  == domain 3    score: 33.0 bits;  conditional E-value: 1.5e-11
   PF13857.1   7 advnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgl 50 
                  dvna++++g+t+Lh+A+++ + +++r Ll++ga+  +++ dg 
  MMETSP1325-20131115|6661_1  82 CDVNAQNKKGQTALHMAVEYDYYWIARTLLDNGANGQIKNVDGH 125
                 79***************************************994 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 2.7
   PF13857.1  23 AakggalevvrlLl 36 
                 Aa+   +e+v+ + 
  MMETSP1325-20131115|6661_1 171 AAEIDKAEIVQAFM 184
                 77778899999988 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.39   1.1e+03       5      13 ..      28      36 ..      28      52 .. 0.68
   2 !   28.9   0.3     2e-10   5.6e-07       2      33 .]      58      89 ..      57      89 .. 0.91
   3 !   19.4   0.0     2e-07   0.00056       2      32 ..      91     121 ..      90     122 .. 0.91
   4 ?   -1.1   0.0      0.64   1.8e+03       9      24 ..     171     186 ..     170     192 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.39
                HHHHHHHTT CS
  PF00023.25  5 PLHlAalrg 13
                P H A+++ 
  MMETSP1325-20131115|6661_1 28 PIHSACRWA 36
                899999986 PP

  == domain 2    score: 28.9 bits;  conditional E-value: 2e-10
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                G+   H+Aa++g+ e+++lL+++++d+naq++
  MMETSP1325-20131115|6661_1 58 GNRLVHIAAQNGHQEILELLVKNNCDVNAQNK 89
                55567*************************96 PP

  == domain 3    score: 19.4 bits;  conditional E-value: 2e-07
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G+T+LH+A++++++ +++ Ll++GA+  +++
  MMETSP1325-20131115|6661_1  91 GQTALHMAVEYDYYWIARTLLDNGANGQIKN 121
                 9************************976665 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 0.64
                 HHHTTHHHHHHHHHHT CS
  PF00023.25   9 AalrgnlevvklLlsq 24 
                 Aa+ + +e+v+ + ++
  MMETSP1325-20131115|6661_1 171 AAEIDKAEIVQAFMKH 186
                 77778899***99985 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.27   7.4e+02       4      14 ..      27      37 ..      25      49 .. 0.77
   2 !   27.0   0.2   9.1e-10   2.5e-06       1      30 []      57      86 ..      57      86 .. 0.97
   3 !   19.3   0.0   2.8e-07   0.00075       2      27 ..      91     116 ..      90     119 .. 0.94
   4 ?   -2.8   0.0         4   1.1e+04       9      21 ..     171     183 ..     170     188 .. 0.75

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.27
   PF13606.1  4 TpLhlAasngr 14
                 p+h A++  +
  MMETSP1325-20131115|6661_1 27 KPIHSACRWAK 37
                699****9655 PP

  == domain 2    score: 27.0 bits;  conditional E-value: 9.1e-10
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadina 30
                nGn + h+Aa+ng+ e++e+L++n +d+na
  MMETSP1325-20131115|6661_1 57 NGNRLVHIAAQNGHQEILELLVKNNCDVNA 86
                799*************************96 PP

  == domain 3    score: 19.3 bits;  conditional E-value: 2.8e-07
   PF13606.1   2 GnTpLhlAasngrielveaLlengad 27 
                 G+T+Lh+A+++  + +++ Ll+nga+
  MMETSP1325-20131115|6661_1  91 GQTALHMAVEYDYYWIARTLLDNGAN 116
                 9***********************98 PP

  == domain 4    score: -2.8 bits;  conditional E-value: 4
   PF13606.1   9 AasngrielveaL 21 
                 Aa+  + e+v+a 
  MMETSP1325-20131115|6661_1 171 AAEIDKAEIVQAF 183
                 7777888999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       694  (0.0507607); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 1065.61
//
Query:       MMETSP1325-20131115|6666_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.6e-35  119.7   0.0    8.5e-35  119.5   0.0    1.0  1  PF07933.9 Protein of unknown function (DUF1681)


Domain annotation for each model (and alignments):
>> PF07933.9  Protein of unknown function (DUF1681)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.5   0.0   6.2e-39   8.5e-35       1     113 [.       8     117 .]       8     117 .] 0.95

  Alignments for each domain:
  == domain 1    score: 119.5 bits;  conditional E-value: 6.2e-39
   PF07933.9   1 aiervLlikkevhvykiPplssskgykaadWkldeqiwtgrlrvvekkekvkvdivledkstgelfaaapyteeeavekvlDSsRyFalrvede..ngrkailGlGFedRseaFd 113
                 +ie++L++ ++vhv++iPp+sss g++a+dW+  +++w+g+l++v+k++++  +++l dk++g+ fa+ap+ +  avek++DSsRyF+lr  ++  + ++a++Gl F++R++aF+
  MMETSP1325-20131115|6666_1   8 EIETTLCMIHTVHVFQIPPRSSSGGHRANDWT--REVWDGKLKIVQKGSNA--TVYLLDKHNGNEFAQAPVVD-GAVEKCVDSSRYFVLRCVNQkdKNQRAFIGLAFNERNDAFE 117
                 5899****************************..99***************..89999************987.8***************9887456799**************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|6663_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1144.38
//
Query:       MMETSP1325-20131115|6667_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|6671_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|6672_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|6674_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-24   84.1   0.0    8.8e-24   83.8   0.0    1.1  1  PF02786.12 Carbamoyl-phosphate synthase L chain, ATP binding domain


Domain annotation for each model (and alignments):
>> PF02786.12  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.8   0.0   6.4e-28   8.8e-24     149     210 ..       1      62 [.       1      63 [. 0.98

  Alignments for each domain:
  == domain 1    score: 83.8 bits;  conditional E-value: 6.4e-28
                 HHH-------EEEEEE-TT---EEEEEEESS--TTHHHHHHH----HHHHHHHHH----CCC CS
  PF02786.12 149 vrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGldlvkeaakialgekLee 210
                 vr++g+vg+++++++l+p+s ey++iEvN+Rls++sala+kaTG++l+++aak++lg++L+e
  MMETSP1325-20131115|6674_1   1 VRHLGIVGECNIQYALNPHSLEYCIIEVNARLSRSSALASKATGYPLAFVAAKLSLGIELNE 62 
                 69**********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 536.58
//
Query:       MMETSP1325-20131115|6675_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.4   0.0      0.035   13.7   0.0    1.3  1  PF14085.1 Domain of unknown function (DUF4265)
        2.7    8.7   7.5        4.3    8.1   5.1    1.5  1  PF12609.3 Wound-induced protein


Domain annotation for each model (and alignments):
>> PF14085.1  Domain of unknown function (DUF4265)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.2e-06     0.035      44      92 ..      53      98 ..      39     103 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 5.2e-06
   PF14085.1 44 kkvvessGnstirvvveekaealaekvreelealgctleglsesllavd 92
                +k+ ++++n++i+v++ +++++l++++ +    l ++ ++++es++avd
  MMETSP1325-20131115|6675_1 53 TKRNRAADNFCIKVAAIRNHNELRATLAQL---LHLRFDQVQESYVAVD 98
                456799*************99666666666...889***********98 PP

>> PF12609.3  Wound-induced protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.1   0.00062       4.3      30      69 ..       8      47 ..       1      61 [. 0.69

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00062
   PF12609.3 30 aakanaarsasqakklssssssssaaaaeekrkqaEesLR 69
                +++an  rs+++a++   +++ ++a a+++k +q+Ee++R
  MMETSP1325-20131115|6675_1  8 NSQANKVRSSAKANAEVNTNANAKADANSTKLSQEEEEMR 47
                33344444444444444444444999999**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1120  (0.0819193); expected 273.4 (0.02)
Passed bias filter:                      638  (0.0466647); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.44s 00:00:00.87 Elapsed: 00:00:00.62
# Mc/sec: 409.70
//
Query:       MMETSP1325-20131115|6676_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|6668_1  [L=456]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-27   94.1   0.2    1.5e-26   93.1   0.2    1.5  1  PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold
    3.2e-07   30.0   0.0    8.7e-07   28.6   0.0    1.9  1  PF02894.12 Oxidoreductase family, C-terminal alpha/beta domain
    4.8e-05   22.3   0.1    7.2e-05   21.8   0.1    1.2  1  PF03435.13 Saccharopine dehydrogenase
    7.7e-05   22.7   0.0    0.00015   21.7   0.0    1.4  1  PF01488.15 Shikimate / quinate 5-dehydrogenase
    0.00025   21.2   0.0    0.00062   20.0   0.0    1.7  1  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
     0.0003   20.9   0.0    0.00059   20.0   0.0    1.5  1  PF01118.19 Semialdehyde dehydrogenase, NAD binding domain
  ------ inclusion threshold ------
      0.079   12.8   0.0       0.16   11.8   0.0    1.5  1  PF02254.13 TrkA-N domain


Domain annotation for each model (and alignments):
>> PF01408.17  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1   0.2   7.8e-30   1.5e-26       2     117 ..      36     151 ..      35     154 .. 0.93

  Alignments for each domain:
  == domain 1    score: 93.1 bits;  conditional E-value: 7.8e-30
                 EEEEE----HHHHHHHHHHHCHCSEEEEEEEGSSHCCHHHHHHHCTHHCCSSHH.HHHHSTT-SEEEE-S-GGGHHHHHHHHHHTT-EEEEESSS-SSHHHHHHHHHHHHHHT--EE CS
  PF01408.17   2 rvgivGaGkigsrhlrplnesqrreelvalvdpdperaeavaesfgveaysdle.elledpkidavivatpngthadlalaaleagkhvllEKPlattveeakelvelaekkgkivs 117
                  vg++GaG+ig  hl  + +s+++++ v + +p  ++ae++a++f+v++++  + e++++p++dav++++p+++had ++a+++agkhv++EKP+at++ e  e +++++ ++++++
  MMETSP1325-20131115|6668_1  36 GVGVIGAGRIGIVHL-EALASCPDAKPVIISNPTVSKAENAAKKFNVPNWTGDDmEVINHPDVDAVWICSPSSFHADQIKACAAAGKHVFCEKPIATDLPETIEAINACKIANVKLM 151
                 69*************.555666**************************9998776***************************************************99999888876 PP

>> PF02894.12  Oxidoreductase family, C-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   4.5e-10   8.7e-07       1      70 [.     166     229 ..     166     277 .. 0.79

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 4.5e-10
                 HHHHHTTGG--SSEEEEEEEEEEECCSCHHCTTSSCCHHCHHCCTTCHHHHHHHHHHHT-EEEEEEEEE- CS
  PF02894.12   1 keliengklGevvsvsvwflddragrpskkrwkrrakkggGvlgdlgiHdiDllqwLfGeppsvvaalgr 70 
                 +e+i n+++G + + +++++d  ++++s ++++      gG++ d+++Hd+D+ ++L+Ge+p+   a+g+
  MMETSP1325-20131115|6668_1 166 REAIVNNEVGSPIVAKLCSRDPAPPPFSYVEGS------GGIFKDMAVHDLDMSRFLMGEEPEAILAYGA 229
                 677778888888777766666666666666666......9*************************99974 PP

>> PF03435.13  Saccharopine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   3.7e-08   7.2e-05       1      96 [.      37     125 ..      37     157 .. 0.86

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 3.7e-08
  PF03435.13   1 vlvlGaGsvGqavaellarhgdvdeitvadrtlekaqalaakalglrveaialdvsnyeaLeallkegdlvvnlappilsltvlkaCietgvhyvd 96 
                 v v+GaG++G + +e la   d + +++  +t +ka+++a+k + ++ +   + v n+++        d+v  ++p +++++ +kaC+++g+h+ +
  MMETSP1325-20131115|6668_1  37 VGVIGAGRIGIVHLEALASCPDAKPVIISNPTVSKAENAAKKFNVPNWTGDDMEVINHPD-------VDAVWICSPSSFHADQIKACAAAGKHVFC 125
                 689********************9***************987777777777777777775.......577889********************976 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   7.8e-08   0.00015      10     112 ..      32     135 ..      23     154 .. 0.70

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 7.8e-08
                 ..--EEEEE----HHHHHGGG--TT.T-E.EEE----HHHHHHHHHHH...T-EE---S-HHHHHHT-SEEEE-S--SS-SB-GGG-----...........EEEE----- CS
  PF01488.15  10 lkgkkvlviGAGemarlvakhLlek.gvkkiviaNRtaekakeLaeelggeevealpleeleellaeadvvisatsapepiiekeaveeakkk.......lgllvDiavPR 112
                 +k+  v viGAG ++   +++L++   +k ++i N t +ka++ a++++  + +   +e ++  + ++d v  ++ ++   ++ ++++++ ++       + +  D+  P 
  MMETSP1325-20131115|6668_1  32 MKEIGVGVIGAGRIGIVHLEALASCpDAKPVIISNPTVSKAENAAKKFNVPNWTGDDMEVIN--HPDVDAVWICSPSS---FHADQIKACAAAgkhvfceKPIATDL--PE 135
                 6677789*****************99**********************77767777777777..67788777666665...55555555554343233332344444..43 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   3.2e-07   0.00062       2      77 ..      37     112 ..      36     124 .. 0.79

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 3.2e-07
  PF03807.12   2 igiiGaGnigealakglaaagaqkheviiaasrspekaeelaeelgvkvtavsneeaae..eadvvilavkpedveev 77 
                 +g+iGaG+ig   ++ la++  +++ vii+ +++ +kae +a++++v   + +  e+++  + d v ++ + + +++ 
  MMETSP1325-20131115|6668_1  37 VGVIGAGRIGIVHLEALASCP-DAKPVIIS-NPTVSKAENAAKKFNVPNWTGDDMEVINhpDVDAVWICSPSSFHADQ 112
                 79*****************98.88889866.***************777777******94444456666666655555 PP

>> PF01118.19  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0     3e-07   0.00059       2      94 ..      37     124 ..      36     145 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 3e-07
                 EEEB--------HHHHHHHCTSSEEEEEEEETTTT---BHHHHSGGGCCCCCEBEEEGCGCCCTC-SEEEE---HHHHHHHHHCHHHTTSEEE CS
  PF01118.19   2 vaivGatGyvGqellrlLeehpelelvalvassrsaGkklaeahkaleegkdlvledadeeelkevdivflalpagvskelapklleagvkvi 94 
                 v+++G  G +G + l+ L++ p+++ v ++    s+ +  a++++    + +++ +d++  +  +vd v  + p++ +++ ++++++ag++v+
  MMETSP1325-20131115|6668_1  37 VGVIG-AGRIGIVHLEALASCPDAKPVIISNPTVSKAENAAKKFN----VPNWTGDDMEVINHPDVDAVWICSPSSFHADQIKACAAAGKHVF 124
                 9****.9****************9999988877788888888877....778888887767789**************************998 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   8.2e-05      0.16       3      93 ..      39     130 ..      37     148 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 8.2e-05
                 EE---HHHHHHHCCCHH.--...EEEEES-HHHHHHHHH---EEEE--TTSHHHHHHTT-----EEEE--SSH..HHHHHHHHHH.CCC-TTSEEE CS
  PF02254.13   3 iiGlGrvGrslaeeLre.ge.kdvvvidkdeerveelreeglevvvgdatdeevLeeagieeadaviaatgdd..eanllavlla.kelnpkkkii 93 
                 +iG+Gr+G   +e+L +    k+v++     +++e ++++ ++v +  + d ev  +    ++dav +++++   ++ + a+++a k+ + +k+i 
  MMETSP1325-20131115|6668_1  39 VIGAGRIGIVHLEALAScPDaKPVIISNPTVSKAENAAKK-FNVPNWTGDDMEVINH---PDVDAVWICSPSSfhADQIKACAAAgKHVFCEKPIA 130
                 9****************76655566666666777777655.5777777766666555...588899999988888999999999988877776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.75u 0.40s 00:00:01.14 Elapsed: 00:00:00.52
# Mc/sec: 2101.42
//
Query:       MMETSP1325-20131115|6677_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 662.52
//
Query:       MMETSP1325-20131115|6678_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.68    9.9   5.4       0.53   10.2   3.1    1.3  1  PF02993.9 Minor capsid protein VI


Domain annotation for each model (and alignments):
>> PF02993.9  Minor capsid protein VI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.1   3.9e-05      0.53     108     195 ..      51     137 ..      39     147 .. 0.68

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 3.9e-05
   PF02993.9 108 krlgeeepatqeetvedlkqaeekkkrpeaeetlvpaapepPsleealkqkpapveepveesatavlaldkpvtlelppaeqkapkvv 195
                 kr++ ee++ + e++   k +    k+ +    lv+a+++pP+ +e+ k +     +  ++  + +  + k++  +l+pa++k ++++
  MMETSP1325-20131115|6678_1  51 KRKE-EEKQRAREKLRRSKLRDTSGKEHPWMTRLVTAEDKPPPPKETGKARDFRAGRAPKSATFVSKHTRKEMAKPLKPADAKIQEAI 137
                 3333.4444444444435555555666668899***************9998555554444444444478888999999998877764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       789  (0.0577092); expected 273.4 (0.02)
Passed bias filter:                      497  (0.0363517); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 756.50
//
Query:       MMETSP1325-20131115|6679_1  [L=333]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-93  311.3   0.0    3.7e-93  311.0   0.0    1.0  1  PF01115.12 F-actin capping protein, beta subunit


Domain annotation for each model (and alignments):
>> PF01115.12  F-actin capping protein, beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  311.0   0.0   2.7e-97   3.7e-93       2     242 .]      32     266 ..      31     266 .. 0.97

  Alignments for each domain:
  == domain 1    score: 311.0 bits;  conditional E-value: 2.7e-97
  PF01115.12   2 ldaaldLlrrlppkkveenlesliklapelaedllssvdqpLkvkkdsesgkeyllcdyNrdgdSyRSpwsnkYepeleeedeeegavpseklRklEikaNeafdvyrdlyyeggvssvYlwdldeedgfagvvllkkeek.keekksgkwdsihvfevteeasesasYkltstvilslkkkseakgelelsgsltrqkekdlkleddtshianiGrliEdmeaklrnllqevYfgktkdiv 242
                 ++++l+++rr+pp+k+e+nl+ l++l+pe +++ll++vdqpL+ +++s++g++yllcdyNrdgdSyRSpwsn+Yep l+     +g +ps+ lR +E++aN+ +d+yr+ yyeggvssvYlwdld+  gfag++l+kke k +   ++g wdsihv+evte+ +++a+Ykltst +l+++ +++  ge +lsg +t+qke +l+++d + hi+niG++iEdme  +r++++++Y++kt++iv
  MMETSP1325-20131115|6679_1  32 ITSSLSIMRRMPPNKIEQNLSGLLNLIPEQTDELLQRVDQPLEEATCSATGRKYLLCDYNRDGDSYRSPWSNTYEPALD-----DGFQPSDALRAMEVDANTLYDSYREQYYEGGVSSVYLWDLDT--GFAGCFLVKKEVKgHAFVSDGGWDSIHVVEVTETGNGKATYKLTSTLMLTMSVSKKVVGETNLSGCMTKQKELTLPVTDVKPHIVNIGSMIEDMEIDMRSNMDNLYIQKTREIV 266
                 6899***************************************************************************.....9***************************************99..8**********5514456789*******************************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       470  (0.0343768); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 1595.97
//
Query:       MMETSP1325-20131115|6682_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       545  (0.0398625); expected 273.4 (0.02)
Passed bias filter:                      446  (0.0326214); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 697.12
//
Query:       MMETSP1325-20131115|6680_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.71
# Mc/sec: 205.88
//
Query:       MMETSP1325-20131115|6687_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 249.22
//
Query:       MMETSP1325-20131115|6690_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.034   13.8   0.0      0.055   13.2   0.0    1.3  1  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     4e-06     0.055       5      19 ..       7      23 ..       7      24 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4e-06
                HHHHHHH-..---HHHH CS
  PF00627.26  5 aiqqLreM..Gfsreea 19
                aiq+L++M  Gf+ +++
  MMETSP1325-20131115|6690_1  7 AIQRLMDMfgGFPQSTC 23
                69*******88***999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 249.22
//
Query:       MMETSP1325-20131115|6691_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.97    8.8   5.7        1.3    8.3   0.8    2.0  2  PF13804.1  Retro-transcribing viruses envelope glycoprotein
          2    8.3  13.8       0.59   10.1   1.4    2.6  2  PF10203.4  Cytochrome c oxidase assembly protein PET191


Domain annotation for each model (and alignments):
>> PF13804.1  Retro-transcribing viruses envelope glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2    0.0079        54     123     163 ..       2      42 ..       1      49 [. 0.77
   2 ?    8.3   0.8   0.00019       1.3     113     163 ..      59     109 ..      51     114 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.0079
   PF13804.1 123 kntevlvweecvansavilqnnefgt.iidwaprgqfyhncs 163
                 kn +  v ++c  +++ ++q + f +  +d  p  +f   c 
  MMETSP1325-20131115|6691_1   2 KNLDCQVDDDCAGDTVCVIQSDGFYAqCVDCDPT-EFENSCG 42 
                 78899999************99986526777764.6777775 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00019
   PF13804.1 113 pcpkeipkeskntevlvweecvansavilqnn.efgtiidwaprgqfyhncs 163
                 +c  ++p   k  +  v e+c  +++ ++q + +f+  id +   +f+  cs
  MMETSP1325-20131115|6691_1  59 TCGDDVPCTEKGLDCCVDEDCDGETVCVIQSDgNFAQCIDCS-EPNFDNSCS 109
                 799*******************999888876538*****976.567888887 PP

>> PF10203.4  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.2   0.00092       6.3      14      44 ..      11      41 ..       9      48 .. 0.92
   2 ?   10.1   1.4   8.6e-05      0.59      14      45 ..      78     109 ..      77     114 .. 0.92

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00092
   PF10203.4 14 eCllesdCvkkekkspkeClkekkkelpeeC 44
                +C   + Cv +++  + +C++    e++++C
  MMETSP1325-20131115|6691_1 11 DCAGDTVCVIQSDGFYAQCVDCDPTEFENSC 41
                69999****************9999999999 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 8.6e-05
   PF10203.4  14 eCllesdCvkkekkspkeClkekkkelpeeCk 45 
                 +C  e+ Cv +++ ++ +C++ ++ +++++C 
  MMETSP1325-20131115|6691_1  78 DCDGETVCVIQSDGNFAQCIDCSEPNFDNSCS 109
                 58889**************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 629.63
//
Query:       MMETSP1325-20131115|6688_1  [L=388]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-41  140.2   0.0    7.4e-32  110.0   0.0    2.2  2  PF11288.3 Protein of unknown function (DUF3089)


Domain annotation for each model (and alignments):
>> PF11288.3  Protein of unknown function (DUF3089)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.0   0.0   5.4e-36   7.4e-32       2     119 ..      43     168 ..      42     171 .. 0.85
   2 !   28.1   0.0   6.7e-11   9.2e-07     122     206 ..     196     284 ..     191     286 .. 0.70

  Alignments for each domain:
  == domain 1    score: 110.0 bits;  conditional E-value: 5.4e-36
   PF11288.3   2 vdvFfvhPTvy..ldksewnadlddeearalarvvlaaqasafnevgrvfAPrYRqatlaafletdkee....aekalelaysDVkrAFaaylaeeneg..rpiiLaGhsQGsllllrLlreeiag 119
                 vdvF+vhPT+   ++++++  ++  + a++++ +++   asaf++vgr+fAP+YRqa+l  f+  +++     + +a++laysDV++AF +y++ ++eg  r++iLa hsQGs++l+rLlre  +g
  MMETSP1325-20131115|6688_1  43 VDVFYVHPTTAwtVHGHSGTGNVGIDAAKQMTMHTVGGHASAFSSVGRIFAPKYRQAKLDNFRTWSGDPhedpHCAAFDLAYSDVRAAFVEYVNTWSEGgtRGLILASHSQGSMHLTRLLRELRDG 168
                 8********974444456777777777777********************************854444344467899*****************99886669*******************97665 PP

  == domain 2    score: 28.1 bits;  conditional E-value: 6.7e-11
   PF11288.3 122 lqkrlvaAyligapvsveevgslaslpacatadqtgcvvsyvsfaeaa...dpealr....ervealegsrgksrdegeellcvnPlllaag 206
                 l+++lv Aylig+++      +++slp+ ++adqt c+v+y ++a+a+      al+     +++a eg+   ++ ++++ + vnP++++++
  MMETSP1325-20131115|6688_1 196 LREQLVCAYLIGWQLGR---DTFESLPLGERADQTDCFVTYCTLADAEgggASPALTlaggGSYHAEEGTWCSRTWHTATPVSVNPVTWTTQ 284
                 89************999...568*********************544311111222211113455555555566666778888899988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 1754.31
//
Query:       MMETSP1325-20131115|6694_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 512.82
//
Query:       MMETSP1325-20131115|6697_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 457.08
//
Query:       MMETSP1325-20131115|6698_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|6699_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 448.77
//
Query:       MMETSP1325-20131115|6700_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-05   23.8   0.0    2.1e-05   23.6   0.0    1.0  1  PF01041.12 DegT/DnrJ/EryC1/StrS aminotransferase family
  ------ inclusion threshold ------
      0.015   14.8   0.0      0.031   13.8   0.0    1.5  1  PF11310.3  Protein of unknown function (DUF3113)


Domain annotation for each model (and alignments):
>> PF01041.12  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   3.1e-09   2.1e-05     219     362 ..      12     153 ..       4     154 .. 0.82

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 3.1e-09
  PF01041.12 219 GynlrltelqAavglaqLekldeliarrreiaelykeelaelpgleeltepteeseaawhlfpvllkeeaavsrdelvealkeegigtrvhytnplhaqpvyeerkkeaagelpnaerlaeevlslplypelteeevdrvveav 362
                  y lr+  + Aa+++ q+  lde++++ +e +  +  ++++lp +  + + +e +  +   + ++l++ +  +  ++++a k++++ ++++   p +a+   ++++  a+  lp++e+l ++++ + +   +++ + d++ e v
  MMETSP1325-20131115|6700_1  12 NYSLRMHAVTAAILRPQILTLDERREKYNERYYKLVARFNKLPHVYIPDQYPEVT-IVGDSIQLTLQDMSPEQITKMMDACKARNLPVELFG-DPSNARYFKNWKFAPADCPLPQTEALIKSTIDIRMPLMWDDSDFDDMYEVV 153
                 5899***************************************986666666655.566666666666655689999999999999999888.5999777777777888889***********999988888888888777765 PP

>> PF11310.3  Protein of unknown function (DUF3113)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.5e-06     0.031       2      29 ..     124     151 ..     123     161 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.5e-06
   PF11310.3   2 qqqaYinatiDiRiPteveyvhfddvDk 29 
                 q  a i  tiDiR+P   +  +fdd+ +
  MMETSP1325-20131115|6700_1 124 QTEALIKSTIDIRMPLMWDDSDFDDMYE 151
                 7899********************9854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      485  (0.035474); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.47s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 776.42
//
Query:       MMETSP1325-20131115|6695_1  [L=435]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-12   46.8   0.3    1.3e-11   44.3   0.0    2.0  2  PF00899.16 ThiF family
  ------ inclusion threshold ------
       0.02   13.9   0.0       0.04   12.9   0.0    1.6  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF00899.16  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0   1.9e-15   1.3e-11       3      98 ..      24     115 ..      22     149 .. 0.86
   2 ?    0.2   0.0     0.077   5.3e+02      61      91 ..     356     386 ..     344     424 .. 0.69

  Alignments for each domain:
  == domain 1    score: 44.3 bits;  conditional E-value: 1.9e-15
  PF00899.16   3 skvlvvGaGglGseaaeaLaraGvgkltlvDkDtvelsNlnRqllfreedvgkpKaevakerlreinpeveveaveeriteenleellkdvDlvvd 98 
                 +kvl+vG+ g+G+e+a++++  G + +t++D   v +++l   ++ +e+d+gk++ ev   +l+e+ +e++v+ v+e ++e  ++  +    +v+ 
  MMETSP1325-20131115|6695_1  24 MKVLIVGMTGIGTEVAKNIILQGSRAVTFYDPTPVAMKDLGVNFCLSESDIGKRRDEVTVPKLQELSKECKVSMVNELTDEVVADHTV----VVIT 115
                 79*************************************************************************9999665555554....3333 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.077
  PF00899.16  61 akerlreinpeveveaveeriteenleellk 91 
                 a + ++e+ p+ +v a++++++e+ + ++ +
  MMETSP1325-20131115|6695_1 356 AMQVFNETTPNAKVAAIDNDVDEDVIRKVHN 386
                 6778899999999999999998887777663 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   5.8e-06      0.04      27      82 ..      14      67 ..       3     117 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.8e-06
                GCG-B-.GGGSEEE-B-------HHHHHHHH---.EEEE--SS--...HHHH---EE CS
  PF02826.14 27 kallgkelsgktvGiiGlGrIGqavakrlkafgm.kvlaydrskkkeeeeeelgaev 82
                 + + ++l +++v i+G+  IG++vak +   g   v++yd+++ +   +++lg+++
  MMETSP1325-20131115|6695_1 14 GEETVRKLVRMKVLIVGMTGIGTEVAKNIILQGSrAVTFYDPTPVA---MKDLGVNF 67
                4566778999*****************988666658999***9773...45555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.42s 00:00:01.09 Elapsed: 00:00:00.67
# Mc/sec: 1555.84
//
Query:       MMETSP1325-20131115|6704_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.44s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 545.05
//
Query:       MMETSP1325-20131115|6706_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-16   58.2   0.0    7.4e-16   57.9   0.0    1.1  1  PF00378.15 Enoyl-CoA hydratase/isomerase family


Domain annotation for each model (and alignments):
>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   5.4e-20   7.4e-16       5      92 ..      58     142 ..      55     143 .] 0.94

  Alignments for each domain:
  == domain 1    score: 57.9 bits;  conditional E-value: 5.4e-20
                 ----EEEEE-----S----HHHHHHHHHHHHHHHH-TT----EEE----SSB----HHHCHHH-CHHHH---HHHHHHHHHHHT-SS- CS
  PF00378.15   5 engvavikldrpekvNalsaelleelkealekleadksikaivlsggekaFsaGaDikelaaeteaeqaqlseeaqklvekledlekp 92 
                  + v +i+l+rp kvNa s+ ll+++++a + ++ad+ ++a+v++g+ek+Fs GaDik+++       ++++ ++ + ++ ++dl+kp
  MMETSP1325-20131115|6706_1  58 RDRVGLITLNRP-KVNAVSDPLLHDITAACKIFDADEGVGAVVITGNEKFFSGGADIKQMSTV--TYGEAIRTNMFHDWDFIKDLNKP 142
                 67899*******.************************************************99..77788999999*********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 729.10
//
Query:       MMETSP1325-20131115|6705_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-10   40.3   0.1    1.9e-10   39.6   0.0    1.2  1  PF01490.13 Transmembrane amino acid transporter protein


Domain annotation for each model (and alignments):
>> PF01490.13  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.0   1.4e-14   1.9e-10     317     370 ..      40      93 ..      35     101 .. 0.92

  Alignments for each domain:
  == domain 1    score: 39.6 bits;  conditional E-value: 1.4e-14
  PF01490.13 317 apkskllrlvirlllvvityliAlsvpslakvlslvGatsstslsfilPalfhl 370
                 ++++ ++r++ir++lv+it  +A+ vp++a++ +lvG +s t+ s++lP+l++ 
  MMETSP1325-20131115|6705_1  40 NWARCWVRNAIRICLVLITSSLAIAVPHFALLSGLVGGVSDTLQSLVLPPLLYV 93 
                 5677799*********************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 738.88
//
Query:       MMETSP1325-20131115|6703_1  [L=325]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-10   38.1   0.0    1.6e-09   37.3   0.0    1.5  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   1.2e-13   1.6e-09       8      90 ..     107     188 ..     103     189 .. 0.93

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 1.2e-13
                 -EEE-TT-B--EEEEEEE-EEEEEEE-----EEEEEEE-TTEECSGGGCCSSS...B-SSEEEEEEEEEEEEEEHHHHHHHHCC-H CS
  PF00027.24   8 evifkeGdpadslyiilsGkvkvykndedgkesilaelgpGdffGelalltge...prsatvvaltdvevlvipredfrelleknp 90 
                 ++i+++G+ + ++y++ +G +    +d+       +el +Gd+fGe+a++t++    r+ +v alt +e+ ++  +df+++++ +p
  MMETSP1325-20131115|6703_1 107 SYIYRKGELGMECYLLAKGDALHLDDDNVVV----NELPAGDMFGEMAVITHQethYREEDVFALTYCELETLTLTDFDKICKAFP 188
                 58*****************998777777765....9**********************************************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       508  (0.0371562); expected 273.4 (0.02)
Passed bias filter:                      441  (0.0322557); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.32s 00:00:01.00 Elapsed: 00:00:00.54
# Mc/sec: 1442.25
//
Query:       MMETSP1325-20131115|6708_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 355.17
//
Query:       MMETSP1325-20131115|6707_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 461.52
//
Query:       MMETSP1325-20131115|6710_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        55  (0.00402282); expected 273.4 (0.02)
Passed bias filter:                       50  (0.00365711); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 144.69
//
Query:       MMETSP1325-20131115|6709_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   11.7   0.3       0.44   10.1   0.1    1.9  2  PF03793.14 PASTA domain


Domain annotation for each model (and alignments):
>> PF03793.14  PASTA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   3.2e-05      0.44      42      62 ..      60      80 ..      59      81 .. 0.92
   2 ?   -1.6   0.0      0.14   1.9e+03      13      23 ..     130     140 ..     118     152 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 3.2e-05
                EESS-TTSEEETTSEEEEEEE CS
  PF03793.14 42 sQsPeaGtevskgskvtltvs 62
                 ++P++ t v+k +k++l+vs
  MMETSP1325-20131115|6709_1 60 YTNPPPETVVRKQDKIFLLVS 80
                589*****************9 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.14
                 HHHHHHHCTT- CS
  PF03793.14  13 eAkatLkalGl 23 
                  A++++++ Gl
  MMETSP1325-20131115|6709_1 130 KAVSQATSTGL 140
                 56666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       576  (0.0421299); expected 273.4 (0.02)
Passed bias filter:                      493  (0.0360591); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 816.72
//
Query:       MMETSP1325-20131115|6715_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-16   60.2   0.0    1.7e-16   60.0   0.0    1.0  1  PF02099.12 Josephin
  ------ inclusion threshold ------
        0.1   11.5   0.0       0.11   11.4   0.0    1.0  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF02099.12  Josephin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.0   2.5e-20   1.7e-16       1      59 [.      12      73 ..      12      74 .] 0.89

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 2.5e-20
  PF02099.12  1 kqelqlCalHclNnllQkeafteaeLaeiAkeLdqkernklee...esatpksllakeshNv 59
                +qe+ lC +HclNnllQ+++f+  +La+iA+eLd++er+ + e   ++  ++++la+es Nv
  MMETSP1325-20131115|6715_1 12 RQESALCGQHCLNNLLQGSYFSPGDLADIAQELDAMERQMMLEagvDTPEAIAFLAEESGNV 73
                7999************************************9986556666778888999997 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.5e-05      0.11      40      86 ..      22      70 ..       5      73 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.5e-05
   PF06293.9 40 llgklvrdlyrfklgetrsvrEfrllkr..Lreagvpvpkpvaaaaqkv 86
                 l++l + +y+ + + + +++E+++++r  + eagv++p ++a+ a+ +
  MMETSP1325-20131115|6715_1 22 CLNNLLQGSYFSPGDLADIAQELDAMERqmMLEAGVDTPEAIAFLAEES 70
                567888889999999***********9855679**********988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 328.39
//
Query:       MMETSP1325-20131115|6712_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-09   35.0   0.8    1.2e-08   34.4   0.6    1.3  1  PF00111.22 2Fe-2S iron-sulfur cluster binding domain
    2.6e-05   23.7   0.7    6.2e-05   22.6   0.5    1.6  1  PF13510.1  2Fe-2S iron-sulfur cluster binding domain
     0.0006   19.5   0.9    0.00086   19.0   0.6    1.3  1  PF13085.1  2Fe-2S iron-sulfur cluster binding domain


Domain annotation for each model (and alignments):
>> PF00111.22  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.6   2.7e-12   1.2e-08       4      49 ..      62     104 ..      60     125 .. 0.85

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 2.7e-12
                 SS-EEEEEEEETTCBHHHHHHHT-TTTGTTSS----SSTTEEEEEE CS
  PF00111.22   4 dgkevevevadgettlldaaeenggidipysCggggCgtClvevne 49 
                 +gk  +++v++g + +++a+++  gi +++ C+ g CgtC+v v  
  MMETSP1325-20131115|6712_1  62 NGK-KKINVPEGSS-MMAACKKL-GIKVKTNCKKGDCGTCTVNVGG 104
                 566.7899999999.******99.******************9874 PP

>> PF13510.1  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.5   1.4e-08   6.2e-05      11      70 ..      65     113 ..      56     121 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 1.4e-08
   PF13510.1  11 kevtvpeGdtvasallangvdvprsckyhrpRgilcaggecrnClVevdgepnvracstp 70 
                 k++ vpeG++ ++a+ + g++v + ck+          g+c +C V+v+g+  +rac+ +
  MMETSP1325-20131115|6712_1  65 KKINVPEGSSMMAACKKLGIKVKTNCKK----------GDCGTCTVNVGGKS-IRACVGK 113
                 569************************9..........9***********99.****865 PP

>> PF13085.1  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.6   1.9e-07   0.00086      47      76 ..      85     114 ..      61     124 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 1.9e-07
   PF13085.1  47 afrysCregvCGscavninGkptlaCsati 76 
                 + + +C++g CG+c+vn+ Gk+  aC  ++
  MMETSP1325-20131115|6712_1  85 KVKTNCKKGDCGTCTVNVGGKSIRACVGKV 114
                 56789*********************8665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       672  (0.0491516); expected 273.4 (0.02)
Passed bias filter:                      523  (0.0382534); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 667.92
//
Query:       MMETSP1325-20131115|6713_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00054   19.3   0.0    0.00096   18.4   0.0    1.3  1  PF01582.15 TIR domain
  ------ inclusion threshold ------
      0.028   14.4   1.6        0.2   11.6   0.0    2.7  2  PF06985.6  Heterokaryon incompatibility protein (HET)
      0.098   12.7   0.1       0.29   11.1   0.0    1.9  2  PF13676.1  TIR domain


Domain annotation for each model (and alignments):
>> PF01582.15  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.1e-07   0.00096      30     126 ..      19     112 ..      18     124 .. 0.78

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 2.1e-07
                 -EEEHHHHS-----HHHHHHHHHTTEEEEEEEESHHHHHHTHHHHHTTTCCCT-----.---EEEEESS---TTTS-T-HHHHHHHHCT-SEE--SSC CS
  PF01582.15  30 klfiderDllpgesiaenifeaIkkSrraivilssnyaesewcldElveavkealeqg.nkkviliifykvkesdvrpkqsgkfgkaflktlkwkgdk 126
                 k++id+++++ g   ++++  ++  ++ ++++  + y e  wc  El   +  a e++  ++v+l+ ++++++++    +++++ k+f  ++  + d 
  MMETSP1325-20131115|6713_1  19 KVCIDQDNIEDG---LKVLPINVMACKCMLILCGPSYPERLWCAWELCTLLSFAREEQtLQRVVLVPMESIENKHDA-VEQVERMKQFDVAQAHCYDP 112
                 79**********...5566679******9999999999999*******9998776555157899***********99.78888888887665555554 PP

>> PF06985.6  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.4e-05       0.2      41      59 ..      11      29 ..       2      41 .. 0.78
   2 ?    1.0   0.4     0.084   3.8e+02      87     124 ..      88     125 ..      73     257 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.4e-05
   PF06985.6 41 gerylWiDaiCInqdddae 59
                 + ++W D++CI+qd+ ++
  MMETSP1325-20131115|6713_1 11 RYPTFWLDKVCIDQDNIED 29
                45679**********8764 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.084
   PF06985.6  87 dsllalealralkkesleeeesekedkterksealeel 124
                 ++++a+e+++++k+ + ++ +  + +++ r ++a++++
  MMETSP1325-20131115|6713_1  88 NKHDAVEQVERMKQFDVAQAHCYDPNEEARLWRAIHTV 125
                 44556666666666665553333333333333333333 PP

>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   6.4e-05      0.29      46      84 ..      37      81 ..      10      99 .. 0.72
   2 ?   -3.3   0.0         2   9.2e+03      27      31 ..     160     164 ..     146     174 .. 0.52

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 6.4e-05
   PF13676.1 46 alrradvvlvllspaylasdwvrkEleaa....ke...lgkpvipv 84
                ++ +++++l+l++p+y ++ w+ +El +     +e   l+ +v+ v
  MMETSP1325-20131115|6713_1 37 NVMACKCMLILCGPSYPERLWCAWELCTLlsfaREeqtLQ-RVVLV 81
                5679*********************655544334422222.34444 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 2
   PF13676.1  27 vfldr 31 
                  ++dr
  MMETSP1325-20131115|6713_1 160 NWIDR 164
                 23333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 1427.83
//
Query:       MMETSP1325-20131115|6717_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|6718_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 220.84
//
Query:       MMETSP1325-20131115|6720_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       588  (0.0430076); expected 273.4 (0.02)
Passed bias filter:                      508  (0.0371562); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 585.26
//
Query:       MMETSP1325-20131115|6716_1  [L=361]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.51
# Mc/sec: 1696.24
//
Query:       MMETSP1325-20131115|6722_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0024   17.4   0.0     0.0053   16.3   0.0    1.6  1  PF00153.22 Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.029   13.7   3.1      0.032   13.5   2.1    1.1  1  PF10500.4  Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   7.7e-07    0.0053       6      32 ..     106     132 ..     100     133 .] 0.87

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 7.7e-07
                 HHHHH----HHHCCHHHCHHHHHHHHH CS
  PF00153.22   6 lksllaGaiAgaiaalvttPldvvKtr 32 
                 ++ l+aG++  ++ ++v +P+d++Ktr
  MMETSP1325-20131115|6722_1 106 IAGLAAGGATELVRSVVLHPIDTIKTR 132
                 56688999999999************9 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.1   4.7e-06     0.032      63      94 ..       1      32 [.       1      71 [. 0.65

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4.7e-06
   PF10500.4 63 ssssssssssssssssskseekrkkrkkkkkk 94
                ssssss+s+s+s ++ +++ +  + r +kk +
  MMETSP1325-20131115|6722_1  1 SSSSSSTSTSTSTTNAKSKASATRSRLAKKGQ 32
                45555666666666666665566666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       463  (0.0338648); expected 273.4 (0.02)
Passed bias filter:                      395  (0.0288912); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 708.26
//
Query:       MMETSP1325-20131115|6725_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 670.98
//
Query:       MMETSP1325-20131115|6727_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|6730_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.49
# Mc/sec: 180.95
//
Query:       MMETSP1325-20131115|6731_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0055   16.8   0.0     0.0098   16.0   0.0    1.5  1  PF01503.12 Phosphoribosyl-ATP pyrophosphohydrolase


Domain annotation for each model (and alignments):
>> PF01503.12  Phosphoribosyl-ATP pyrophosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   7.2e-07    0.0098      53      79 ..       2      28 ..       1      33 [. 0.88

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 7.2e-07
                HHHHHHHHH---TTT----HHHHHHHH CS
  PF01503.12 53 alaDllYvlygllvllGldldavfeeV 79
                ++aDllY++++++ + G+++ ++ + +
  MMETSP1325-20131115|6731_1  2 EAADLLYFALVRCTAAGVPVAEIEKHL 28
                89****************999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 344.74
//
Query:       MMETSP1325-20131115|6732_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-13   49.8   0.0    2.4e-13   49.3   0.0    1.2  1  PF03982.8 Diacylglycerol acyltransferase
  ------ inclusion threshold ------
      0.075   11.9   0.0        1.4    7.9   0.0    2.2  2  PF11569.3 Homeodomain leucine-zipper encoding, Homez


Domain annotation for each model (and alignments):
>> PF03982.8  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.0   3.5e-17   2.4e-13     237     290 ..      17      70 ..       4      74 .. 0.91

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 3.5e-17
   PF03982.8 237 lPfrkpittvvGkPievtkteePtkeeidelhakYveaLaeLfeehkekfgvsk 290
                 lPf  ++++vvGkP++ + + +Pt e++ e h+kY+ +L+ L++++k  fg++ 
  MMETSP1325-20131115|6732_1  17 LPFDESLNVVVGKPLQLPTIAKPTAEQVKEWHGKYMTELQALYDKYKGDFGLTG 70 
                 9*************************************************9865 PP

>> PF11569.3  Homeodomain leucine-zipper encoding, Homez
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.012        83      42      52 ..       2      12 ..       1      15 [. 0.77
   2 ?    7.9   0.0    0.0002       1.4      39      51 ..      40      52 ..      31      58 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.012
   PF11569.3 42 qVrdWFaerms 52
                qV++W  + m 
  MMETSP1325-20131115|6732_1  2 QVKEWHGKYMT 12
                9****876665 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0002
   PF11569.3 39 syeqVrdWFaerm 51
                ++eqV++W  + m
  MMETSP1325-20131115|6732_1 40 TAEQVKEWHGKYM 52
                89******87655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 366.79
//
Query:       MMETSP1325-20131115|6733_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|6728_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-57  193.8   0.2    2.9e-57  193.2   0.0    1.4  2  PF04493.9 Endonuclease V
  ------ inclusion threshold ------
       0.16   11.3   0.0        0.5    9.7   0.0    1.7  1  PF08459.6 UvrC Helix-hairpin-helix N-terminal


Domain annotation for each model (and alignments):
>> PF04493.9  Endonuclease V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.4       1.2   8.2e+03     106     116 ..      22      32 ..      21      33 .. 0.88
   2 !  193.2   0.0   4.2e-61   2.9e-57       6     205 ..      76     291 ..      71     292 .. 0.90

  Alignments for each domain:
  == domain 1    score: -4.3 bits;  conditional E-value: 1.2
                 ---TTT----S CS
   PF04493.9 106 lGlAshlgvll 116
                 +GlA+ +gvl+
  MMETSP1325-20131115|6728_1  22 VGLAATAGVLV 32 
                 69******986 PP

  == domain 2    score: 193.2 bits;  conditional E-value: 4.2e-61
                 GGG----------...SEEE--EE---..------EEEEEEETTTTEEEEEEEE-----S------GGGT---HHHHHHTT--S--S.....EEE-------STT----TTT----S-S-EE--BSS----...------SST.......TEEE--B----B---EEE-----.....--EE--------HHHHHHHHHHHS-----S-HHHHHHHHH CS
   PF04493.9   6 qkkislseklseeseikyvagvDvsye.ekeekavaalVvldlpslevvekkvsleevsfPYiPGfLafRElplllkalkkleeekd.....vllvDGnGilHprklGlAshlgvllnlPtiGVAKkllkvtgkdsveveqel.......gaitlilksgevlgvalrtlesv.....kpifvsvgnkislesalelvkklskkesrlpepirqadie 205
                 ++++   +  +    i++v+gvD+s+  ++e+ a+aalVvld ++ +vv+ +  +  ++ PYiPGfLafRE++ ll+++ +l++++       ++vDGnGilHp ++GlA+hlgvl+++PtiG++K+l++v+g++ ++ ++ +        a++l+++sg v+g+ lrt e+v     kp++vsvg+ +sl+sal lv++++++  r+pep+rqad++
  MMETSP1325-20131115|6728_1  76 RRRLIEVDLVDPSCGIRLVGGVDISFVkGSETDACAALVVLDSKTQKVVYSSLRRVVLTAPYIPGFLAFREVRFLLDLIDELRKKEPskvpdCIMVDGNGILHPARFGLACHLGVLAGIPTIGIGKSLHYVDGLTRERTNDLKraclragDAVNLVGDSGAVWGAMLRTTEGVgdtnfKPVIVSVGHGLSLDSALGLVRRCCQH--RIPEPVRQADLQ 291
                 55666666666667799**********999****************************************************9987667777***************************************9988888777557899999999***************98864333449*************************..**********86 PP

>> PF08459.6  UvrC Helix-hairpin-helix N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   7.3e-05       0.5      16     116 ..      96     204 ..      88     219 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 7.3e-05
                 --EEEEE---EE..EEEE--EE--..-B-----EEEEEE..-SS.-HHHHHHHH...HHHHHTTS-.....--SEEE-------HHHHHHHHH.H----..--EE--BSSSS CS
   PF08459.6  16 cfDiShiqgedt..vasmvvfedg..kpkkseYRkykikeiteg.dDyasmrev...ltrrfkrlleeeaklPdLiliDGGkgqlnaakevle.elgle..ipvvglaKkee 116
                  +DiS ++g++t   a++vv +++  k   s+ R+  ++  ++    + ++rev   l    +  ++e +k+Pd i++DG +g l+ a+  l+ +lg+   ip +g+ K+ +
  MMETSP1325-20131115|6728_1  96 GVDISFVKGSETdaCAALVVLDSKtqKVVYSSLRRVVLT--APYiPGFLAFREVrflLDLIDELRKKEPSKVPDCIMVDG-NGILHPARFGLAcHLGVLagIPTIGIGKSLH 204
                 678888888654115666666543113344566777777..233345566665511022222334455669********8.5667777777766888866799999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1410.16
//
Query:       MMETSP1325-20131115|6735_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 330.06
//
Query:       MMETSP1325-20131115|6736_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 606.43
//
Query:       MMETSP1325-20131115|6738_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1189  (0.0869661); expected 273.4 (0.02)
Passed bias filter:                      773  (0.0565389); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.46s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 760.38
//
Query:       MMETSP1325-20131115|6739_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 523.85
//
Query:       MMETSP1325-20131115|6741_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-08   32.6   0.2    4.7e-08   32.4   0.1    1.1  1  PF13414.1  TPR repeat
    1.9e-05   24.7   0.4       0.21   12.2   0.1    2.1  2  PF13428.1  Tetratricopeptide repeat
    8.7e-05   22.0   0.2      0.019   14.7   0.0    2.2  2  PF07719.12 Tetratricopeptide repeat
    0.00013   22.4   0.2    0.00022   21.6   0.1    1.4  1  PF13432.1  Tetratricopeptide repeat
      0.004   17.1   0.0      0.016   15.2   0.0    1.9  2  PF13431.1  Tetratricopeptide repeat
     0.0046   17.2   0.0      0.023   15.0   0.0    1.9  2  PF13174.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.026   13.9   0.1        2.7    7.6   0.0    2.6  2  PF00515.23 Tetratricopeptide repeat
      0.029   14.0   0.1       0.39   10.5   0.0    2.1  2  PF13176.1  Tetratricopeptide repeat
       0.14   12.0   0.6       0.25   11.2   0.4    1.4  1  PF13424.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.1   3.1e-11   4.7e-08      17      69 .]       9      61 ..       3      61 .. 0.93

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 3.1e-11
   PF13414.1 17 gdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                 d + A+e+++ Al+ld +na+++y ++l++  + +d e A+++ e  l ldP
  MMETSP1325-20131115|6741_1  9 ADTALAEEHLSTALRLDQSNAVAMYHMGLLLCDRKRDNEGAVKYWEALLVLDP 61
                56788*****************************9999*************99 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   0.00014      0.21      14      42 ..       8      36 ..       3      38 .. 0.87
   2 !   11.7   0.0   0.00019      0.29      13      42 ..      42      71 .]      35      71 .] 0.86

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00014
   PF13428.1 14 lGdpdeAiallrralalaPddaealllLa 42
                  d++ A+++l  al+l+ ++a a ++++
  MMETSP1325-20131115|6741_1  8 DADTALAEEHLSTALRLDQSNAVAMYHMG 36
                568999******************99987 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00019
   PF13428.1 13 alGdpdeAiallrralalaPddaealllLa 42
                +  d ++A+++ +++l l+P++  a ++L+
  MMETSP1325-20131115|6741_1 42 RKRDNEGAVKYWEALLVLDPGHINAKRRLG 71
                556889*******************99996 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0091        14      18      34 .]      12      28 ..       5      28 .. 0.85
   2 !   14.7   0.0   1.3e-05     0.019       3      34 .]      31      63 ..      29      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0091
                HHHHHHHHHHHHH-TTS CS
  PF07719.12 18 eeAleafekAleldPnn 34
                + A+e++  Al+ld  n
  MMETSP1325-20131115|6741_1 12 ALAEEHLSTALRLDQSN 28
                679**********9765 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 1.3e-05
                HHHHHHHHHHHTT-H.HHHHHHHHHHHHH-TTS CS
  PF07719.12  3 alynlGlayyklgdy.eeAleafekAleldPnn 34
                a y +Gl++  +++  e A++++e  l ldP++
  MMETSP1325-20131115|6741_1 31 AMYHMGLLLCDRKRDnEGAVKYWEALLVLDPGH 63
                7788888888888888***************86 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.1   1.5e-07   0.00022      11      64 ..       9      63 ..       4      64 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.5e-07
   PF13432.1 11 GdydeAlaaleaalalaPeaaeallllaeallrlgrldeAa.allraalalaPdd 64
                 d + A+++l++al+l+  +a a++  + +l +++r  e a ++ +a+l l+P++
  MMETSP1325-20131115|6741_1  9 ADTALAEEHLSTALRLDQSNAVAMYHMGLLLCDRKRDNEGAvKYWEALLVLDPGH 63
                57899***************************9999999999***********86 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     1e-05     0.016       3      32 ..      19      49 ..      17      51 .. 0.81
   2 ?   -0.9   0.0       1.5   2.3e+03       3      15 ..      54      66 ..      52      71 .] 0.67

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1e-05
   PF13431.1  3 ekaleldPnnadaynnLAelllnnG.dleeA 32
                  al+ld  na+a++ +++ll++++ d e A
  MMETSP1325-20131115|6741_1 19 STALRLDQSNAVAMYHMGLLLCDRKrDNEGA 49
                689******************9654156665 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 1.5
   PF13431.1  3 ekaleldPnnada 15
                e +l ldP + +a
  MMETSP1325-20131115|6741_1 54 EALLVLDPGHINA 66
                5678889988776 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.92   1.4e+03      14      23 ..       9      18 ..       2      24 .. 0.56
   2 !   15.0   0.0   1.5e-05     0.023       2      32 ..      31      62 ..      30      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.92
                HHHHHHHHHH CS
   PF13174.1 14 gdtdeAleal 23
                 dt+ A e l
  MMETSP1325-20131115|6741_1  9 ADTALAEEHL 18
                2666666666 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 1.5e-05
                HHHHHHHHHHH.HHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  2 Alyklalsyyk.lgdtdeAlealerlikeyPd 32
                A+y+++l++     d + A++++e l+   P+
  MMETSP1325-20131115|6741_1 31 AMYHMGLLLCDrKRDNEGAVKYWEALLVLDPG 62
                9*****99997577************988886 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0018       2.7      18      34 .]      12      28 ..       5      28 .. 0.89
   2 ?    4.0   0.0     0.024        36      12      33 ..      41      62 ..      29      63 .. 0.68

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0018
                HHHHHHHHHHHHHHTTH CS
  PF00515.23 18 deAleyyekALelnPnn 34
                  A+e+ + AL+l+ +n
  MMETSP1325-20131115|6741_1 12 ALAEEHLSTALRLDQSN 28
                57************987 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.024
                HHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23 12 lklgkydeAleyyekALelnPn 33
                 ++ + + A++y e  L l+P 
  MMETSP1325-20131115|6741_1 41 DRKRDNEGAVKYWEALLVLDPG 62
                4556667788888888888875 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.15   2.3e+02      11      34 ..       7      28 ..       5      32 .. 0.68
   2 ?   10.5   0.0   0.00025      0.39       5      33 ..      35      62 ..      31      65 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.15
   PF13176.1 11 rlgdyekAielyeraLaltkdpld 34
                ++ d+  A+e++    al+ d+++
  MMETSP1325-20131115|6741_1  7 SDADTALAEEHLST--ALRLDQSN 28
                56678889999999..55555544 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00025
   PF13176.1  5 Larl.ysrlgdyekAielyeraLaltkdpl 33
                ++ l + r +d e A+++ e+   l  dp+
  MMETSP1325-20131115|6741_1 35 MGLLlCDRKRDNEGAVKYWEA--LLVLDPG 62
                55553777*************..6666665 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   0.00016      0.25      20      71 ..      10      55 ..       3      60 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00016
   PF13424.1 20 dydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdyde.Aleylek 71
                d   A+e++ +al l +      +   a+a+++++ l+  +++  e A++y e 
  MMETSP1325-20131115|6741_1 10 DTALAEEHLSTALRLdQ------S--NAVAMYHMGLLLCDRKRDNEgAVKYWEA 55
                67789999999998822......3..3999********9999755549999775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|6740_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0054   16.1   0.0     0.0067   15.8   0.0    1.1  1  PF01063.14 Aminotransferase class IV


Domain annotation for each model (and alignments):
>> PF01063.14  Aminotransferase class IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.9e-07    0.0067     134     227 ..       2     112 ..       1     116 [. 0.78

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4.9e-07
  PF01063.14 134 dgnvtEgstsNvfilkg.gelytPslesgiLpGitrqvllelakelgie..........veersltlkdlqqadeafltnslrgilpvtsidgeivs.........sgpltkkl 227
                 +g vtE s++ v +l   g + +P+ e+ iL ++t+++ lel  e  ie           +  ++tl+++++a e+ + +     +p+t+id              +gpl++ l
  MMETSP1325-20131115|6740_1   2 TGLVTESSIACVGFLGPdGVFRCPRFET-ILESTTLRRGLELIDE-QIEsgggitgvdsTSLTDVTLDHVREAVEVIFFGG-GAATPITEIDYGNGTgmqrvggggVGPLCTYL 112
                 6889999999998776505555666665.*********9999874.555668888*9999999******************.899******96655456677777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 762.92
//
Query:       MMETSP1325-20131115|6743_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-09   36.1   0.1    3.7e-09   36.1   0.0    1.0  1  PF00650.15 CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   2.7e-13   3.7e-09      68     128 ..       2      62 ..       1      64 [] 0.89

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 2.7e-13
  PF00650.15  68 DmkglslskmlwkpisllkkilkilqdnyPerlkkilivnaPklfkvafklvkpfldektr 128
                 D+k+  +   + + ++ +k +  ++++nyPe+ ++ ++vn P++f ++f  +  f+++kt+
  MMETSP1325-20131115|6743_1   2 DYKDCVVIGKDARITEAVKLFTACMSNNYPEMKGQTVFVNFPWIFGALFAALAVFIPDKTK 62 
                 66666666667667999******************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.67
# Mc/sec: 228.91
//
Query:       MMETSP1325-20131115|6737_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-45  155.3   0.0    1.5e-45  155.2   0.0    1.0  1  PF00928.16 Adaptor complexes medium subunit family


Domain annotation for each model (and alignments):
>> PF00928.16  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.2   0.0   1.1e-49   1.5e-45      18     205 ..       2     194 ..       1     204 [] 0.89

  Alignments for each domain:
  == domain 1    score: 155.2 bits;  conditional E-value: 1.1e-49
                 EEEEEEEEEE-----EEEEEEE-EEEEEE------EEEE---SS-B------B-SEEEEETT-B-TTHHHH--EEE------EEEEEEEB-S-..S--SEEEEEEEE......-----EEEEEEEEE-......S-TT--BEEEEEEE------EEEEE--STTEEEE---..-EEEEE--B--.......-EE---EEEE CS
  PF00928.16  18 dviEkvsvlvdkdgkllnsevqGtialkskLsGmpevklsLndelniekkgielddvsfHpcVrlskfeservisFiPpdgefeLmrYrvsee..sklplklecqvk.....eeskgrievnvklesq......lkrklslenvkitiplPkevskpvlkvsdGkakydseenvleWsikklpgekehalsgelelsaeqe 205
                 d+iE+v+++vd++g++++sev G ++ +s+LsG p++++++ d+         +dd+sfHpcVr+++fe++rv+sF+Ppdg feLmrYrv+++  ++ p+ + +qv       +  gri+++v  + +      +k ++ +e+v +tip+Pk+v+  +l+v+ G++ yd++++v +W+i+kl + k++ l g++ l+    
  MMETSP1325-20131115|6737_1   2 DIIEEVDAIVDRNGQMVSSEVTGMVQANSRLSGIPDLTMTFIDP-------DVIDDCSFHPCVRYNRFERDRVVSFVPPDGAFELMRYRVNTKanVSAPIYCQSQVMfndsqNTGYGRISITVGQKPTsslimpSKGTMAIEEVALTIPFPKAVRTTNLSVNVGTCLYDEATKVAKWTIGKLTS-KNPQLTGTMVLQGGNT 194
                 9******************************************9.......78*************************************888779999999999987776435557888888887778899888889*********************************************9.7777777666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 905.29
//
Query:       MMETSP1325-20131115|6745_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 847.28
//
Query:       MMETSP1325-20131115|6746_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-12   46.0   4.2    4.7e-06   25.4   0.0    3.7  3  PF00036.27 EF hand
    1.5e-11   43.0   3.3    8.3e-06   25.1   0.0    3.5  3  PF13405.1  EF-hand domain
    5.7e-11   42.2   1.6    0.00029   20.7   0.1    3.1  3  PF13499.1  EF-hand domain pair
    3.3e-06   26.5   4.9    0.00025   20.4   0.0    3.9  4  PF13833.1  EF-hand domain pair
    0.00072   18.6   0.0    0.00072   18.6   0.0    3.1  3  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.027   14.1   0.1      0.035   13.7   0.1    1.1  1  PF07516.8  SecA Wing and Scaffold domain
      0.031   14.2   0.0      0.066   13.1   0.0    1.6  1  PF09068.6  EF hand
      0.059   13.5   0.0       0.11   12.6   0.0    1.6  1  PF07739.8  TipAS antibiotic-recognition domain
      0.091   12.3   0.8       0.12   11.9   0.5    1.3  1  PF05361.7  PKC-activated protein phosphatase-1 inhibitor


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.2    0.0038       5.7      10      26 ..       1      17 [.       1      19 [. 0.92
   2 !   14.0   0.1   1.3e-05      0.02       2      26 ..      54      78 ..      53      81 .. 0.87
   3 !   25.4   0.0   3.1e-09   4.7e-06       4      24 ..     151     171 ..     148     174 .] 0.88

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0038
                CTTTSSEBEHHHHHHHH CS
  PF00036.27 10 DkDgdGkIsfeEfkeal 26
                D+D  G+++++Ef ++l
  MMETSP1325-20131115|6746_1  1 DRDDRGFLTLKEFETLL 17
                999**********9887 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 1.3e-05
                HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkeal 26
                ++e+++++ +Dgd ++++eE  +++
  MMETSP1325-20131115|6746_1 54 FDEIWRHYNTDGDQFMDYEETSNLC 78
                79******************77666 PP

  == domain 3    score: 25.4 bits;  conditional E-value: 3.1e-09
                 HHHHHHCTTTSSEBEHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfke 24 
                  +F +fD+Dg+G+I+ +Efk 
  MMETSP1325-20131115|6746_1 151 ALFTMFDRDGSGYITASEFKY 171
                 68*****************96 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1     0.001       1.6      10      27 ..       1      18 [.       1      29 [. 0.87
   2 !    8.4   0.0    0.0013       1.9       2      21 ..      54      73 ..      53      83 .. 0.91
   3 !   25.1   0.0   5.5e-09   8.3e-06       4      26 ..     151     173 ..     148     174 .] 0.88

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.001
                -------B---HHHHHHH CS
   PF13405.1 10 DkdgdGkidaeELrdaLr 27
                D+d  G+++++E+  +L 
  MMETSP1325-20131115|6746_1  1 DRDDRGFLTLKEFETLLD 18
                99***********99886 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0013
                HH---GCC-------B---H CS
   PF13405.1  2 lreaFklfDkdgdGkidaeE 21
                + e+++++ +dgd + d eE
  MMETSP1325-20131115|6746_1 54 FDEIWRHYNTDGDQFMDYEE 73
                6799**************99 PP

  == domain 3    score: 25.1 bits;  conditional E-value: 5.5e-09
                 ---GCC-------B---HHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaL 26 
                 ++F++fD+dg+G+i+a+E++  L
  MMETSP1325-20131115|6746_1 151 ALFTMFDRDGSGYITASEFKYTL 173
                 79*****************9765 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   1.9e-07   0.00029      10      64 ..       1      76 [.       1      78 [. 0.89
   2 !   10.7   0.1   0.00026       0.4       4      46 ..      56     104 ..      55     133 .. 0.84
   3 !   18.8   0.0   7.8e-07    0.0012       2      26 ..     149     173 ..     143     174 .] 0.90

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.9e-07
   PF13499.1 10 DkdgdgyldkeeLlrllkhlgsels.....................deevrevldyifkelDkngdGvlsfeEflq 64
                D+d  g+l+  e++ ll+++  +                       +e ++   d+i++ ++++gd ++++eE  +
  MMETSP1325-20131115|6746_1  1 DRDDRGFLTLKEFETLLDGAYKKGGkrgggfslkgldmdddwkeemEEALEACFDEIWRHYNTDGDQFMDYEETSN 76
                99****************9986666*****************77777777779999999**************766 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00026
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgsels......deevrevldyif 46 
                 e+++ + +dgd + d+ee  +l+ +++  +       ++ev e++++++
  MMETSP1325-20131115|6746_1  56 EIWRHYNTDGDQFMDYEETSNLCEAMLRAINpgihptEDEVNELVRRLI 104
                 6899999***************999999988999999667666666655 PP

  == domain 3    score: 18.8 bits;  conditional E-value: 7.8e-07
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrll 26 
                 l+ +F ++D+dg+gy++  e+++ l
  MMETSP1325-20131115|6746_1 149 LCALFTMFDRDGSGYITASEFKYTL 173
                 6779*****************9865 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.071   1.1e+02      35      49 ..       1      15 [.       1      19 [. 0.85
   2 ?    3.2   0.0     0.039        60      13      33 ..      80     102 ..      74     103 .. 0.75
   3 ?   -2.7   0.0       2.8   4.3e+03       8      26 ..     115     130 ..     114     133 .. 0.60
   4 !   20.4   0.0   1.7e-07   0.00025      26      48 ..     148     170 ..     145     173 .. 0.92

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.071
   PF13833.1 35 DtdgdGkisfeEFcv 49
                D+d+ G ++++EF +
  MMETSP1325-20131115|6746_1  1 DRDDRGFLTLKEFET 15
                99**********955 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.039
   PF13833.1  13 al.all..glkglseeevdilfre 33 
                 a+ +++  g++ ++e+ev +l+r 
  MMETSP1325-20131115|6746_1  80 AMlRAInpGIH-PTEDEVNELVRR 102
                 55555555999.********9986 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 2.8
   PF13833.1   8 eeLkralallglkg..lseee 26 
                 e+L++     +l +  ++++e
  MMETSP1325-20131115|6746_1 115 EDLRD-----KLLEvlIEDYE 130
                 88888.....44333477776 PP

  == domain 4    score: 20.4 bits;  conditional E-value: 1.7e-07
   PF13833.1  26 evdilfrefDtdgdGkisfeEFc 48 
                 ++++lf +fD+dg+G+i+  EF+
  MMETSP1325-20131115|6746_1 148 DLCALFTMFDRDGSGYITASEFK 170
                 6899******************6 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.036        54      14      25 .]       6      17 ..       1      17 [. 0.84
   2 ?   -4.4   1.5         9   1.4e+04       8      13 ..      36      41 ..      36      41 .. 0.83
   3 !   18.6   0.0   4.8e-07   0.00072       4      22 ..     152     170 ..     151     173 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.036
                --B-HHHHHHHH CS
   PF13202.1 14 GkIsreELkrlv 25
                G+++ +E+++l+
  MMETSP1325-20131115|6746_1  6 GFLTLKEFETLL 17
                9********985 PP

  == domain 2    score: -4.4 bits;  conditional E-value: 9
                H--S-- CS
   PF13202.1  8 fDlNgD 13
                +D++ D
  MMETSP1325-20131115|6746_1 36 LDMDDD 41
                699998 PP

  == domain 3    score: 18.6 bits;  conditional E-value: 4.8e-07
                 HHHHH--S----B-HHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELk 22 
                 +F  fD +g+G I+++E+k
  MMETSP1325-20131115|6746_1 152 LFTMFDRDGSGYITASEFK 170
                 799***************6 PP

>> PF07516.8  SecA Wing and Scaffold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.3e-05     0.035      53     138 ..      39     137 ..      33     159 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.3e-05
                 -S.THHHHHHHHHHHHHHHHHHTS-TTSSC.TCSSHHHHHHHHHHHTS-..---CCCCS-...........----HHCCHHHHHHHHHHHHHHHHHHHH CS
   PF07516.8  53 gedlkeqilemiedviediveeyaeekkke.eewdlegleeelksllgl..elsieeeee..........keklkeeelkeklleeaekayeekeeele 138
                  +d ke++ e++e+ +++i ++y +++++  + +++ +l e++ + ++   +++ +e +e          ++k ++e+l++klle++++ ye+++ e +
  MMETSP1325-20131115|6746_1  39 DDDWKEEMEEALEACFDEIWRHYNTDGDQFmDYEETSNLCEAMLRAINPgiHPTEDEVNElvrrligskkSSKARQEDLRDKLLEVLIEDYEKRMVEAH 137
                 4579999***************99999766566667777666666665322444444444778999887555556777*************87554443 PP

>> PF09068.6  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.3e-05     0.066      73     123 ..     106     173 ..      43     174 .] 0.56

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.3e-05
   PF09068.6  73 y....................dginerlstlpsvpsdpvnvcvdlllnwLlnvyDrkrtgkirvlslkval 123
                                      +  ++r+ + +s p  ++++  dl++  L++++Dr+ +g i+  ++k +l
  MMETSP1325-20131115|6746_1 106 SkksskarqedlrdkllevliEDYEKRMVEAHSQP-PNMQTFSDLCA--LFTMFDRDGSGYITASEFKYTL 173
                 03333333333333333333355566666666555.38889999997..8899***************998 PP

>> PF07739.8  TipAS antibiotic-recognition domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   7.5e-05      0.11      20      70 ..      56     107 ..      41     146 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7.5e-05
                 --------.-----TTHHHHHHHHHHHHHHH----TT----HHHHHHHH--- CS
   PF07739.8  20 eklkslsk.edkeelkkeweelfaelaaamekgvdpdseevqelakehrdll 70 
                 e ++++++  d+    +e  +l +++ +a++ g+ p+ +ev+el+++++   
  MMETSP1325-20131115|6746_1  56 EIWRHYNTdGDQFMDYEETSNLCEAMLRAINPGIHPTEDEVNELVRRLIGSK 107
                 445555552566666678999**************************98655 PP

>> PF05361.7  PKC-activated protein phosphatase-1 inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.5     8e-05      0.12      77     135 ..      66     124 ..      33     137 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8e-05
                 HHHHCTSSTTHHHHHH----CCGTSTTCHHHHHHHHHH-----XX.....XXXXXXXXX CS
   PF05361.7  77 deLldLesdEertrklqellkscskntEaFiseLlsklkglrkqeelkneGiehpslev 135
                 d+ +d e+  +  + +   ++   ++tE+ ++eL+ +l g +k ++ ++e ++   lev
  MMETSP1325-20131115|6746_1  66 DQFMDYEETSNLCEAMLRAINPGIHPTEDEVNELVRRLIGSKKSSKARQEDLRDKLLEV 124
                 5666665555555544445556679*********************9999998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       576  (0.0421299); expected 273.4 (0.02)
Passed bias filter:                      523  (0.0382534); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 731.52
//
Query:       MMETSP1325-20131115|6742_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.4    9.0   7.8       0.42   10.7   0.6    2.3  2  PF11928.3 Domain of unknown function (DUF3446)


Domain annotation for each model (and alignments):
>> PF11928.3  Domain of unknown function (DUF3446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.7     0.014     2e+02      66      83 ..      10      26 ..       1      27 [. 0.74
   2 ?   10.7   0.6   3.1e-05      0.42      40      77 ..      51      89 ..      30      94 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.014
   PF11928.3 66 piYsaaPtYssacgdiyq 83
                 +Y aa +Yss + + +q
  MMETSP1325-20131115|6742_1 10 VVYGAASPYSS-TQPSFQ 26
                6899******9.666665 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 3.1e-05
   PF11928.3 40 ssssssssassqssslscsvsqsepe.piYsaaPtYssa 77
                 ++ +s +     ++ +++ +q+ ++   Ys+ P++s+a
  MMETSP1325-20131115|6742_1 51 NTAYASQTGGFGNPNAFGATQQQAMSfSGYSPTPAFSTA 89
                33335666777889999999*999999999*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1198  (0.0876243); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 694.45
//
Query:       MMETSP1325-20131115|6744_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.029   13.1   0.0      0.029   13.1   0.0    1.0  1  PF07507.6 WavE lipopolysaccharide synthesis


Domain annotation for each model (and alignments):
>> PF07507.6  WavE lipopolysaccharide synthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.1e-06     0.029     149     177 ..       6      35 ..       2      42 .] 0.85

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.1e-06
   PF07507.6 149 pvlfhiSDlfqfGl.tedllkiWdlelled 177
                  v+f   D f+fG+ t+++l iW +e l+ 
  MMETSP1325-20131115|6744_1   6 MVVFKANDPFHFGTiTKAMLSIWRIETLDT 35 
                 5899*********8689*******998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 201.29
//
Query:       MMETSP1325-20131115|6747_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 162.77
//
Query:       MMETSP1325-20131115|6750_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 628.38
//
Query:       MMETSP1325-20131115|6749_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 304.15
//
Query:       MMETSP1325-20131115|6751_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.0   0.0       0.03   13.9   0.0    1.1  1  PF02337.12 Retroviral GAG p10 protein


Domain annotation for each model (and alignments):
>> PF02337.12  Retroviral GAG p10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.2e-06      0.03      52      78 ..      20      47 ..       7      55 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.2e-06
  PF02337.12 52 lksWkrvGkelkryyakhgeeki.pvet 78
                +  W+r+G++l++  + hg  ++ p+++
  MMETSP1325-20131115|6751_1 20 SSVWQRIGDKLQTNLTSHGLHSVePISA 47
                357****************988755555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.25u 0.43s 00:00:00.68 Elapsed: 00:00:00.70
# Mc/sec: 195.13
//
Query:       MMETSP1325-20131115|6748_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-87  292.3   8.9    5.9e-87  292.1   6.1    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.1   6.1   4.3e-91   5.9e-87     278     547 ..       2     281 ..       1     282 [] 0.95

  Alignments for each domain:
  == domain 1    score: 292.1 bits;  conditional E-value: 4.3e-91
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14 278 etlnlfsidstktliaegWvpakeleelkkaleeateesgsevpsiln.rietneepPtylktnkftagfqsivdaYgiakYrEvnpalltiitFpflFgvmlGDlGyGlilllialllvlkekklkakk.dEifqmffkgryilllmgvfSiytGliyndvfskslnifgsgwknpaalkkkesltlakkeg........pypfgidpiwnlaenkLlflnsfkmklsvilGvihmtfglllsffnhvkekskldildafipqlifllsilgYlvilii 547
                 +tlnlf+ d+  +l aegWv + ++ ++++al +a ++ +   + +l+ + +   + Pty++tnkft +fq++vd+Yg+++Y+E npal+t++tFpflFgvm GD+G+G++++l +l+lvl+e+++++kk dE+ + +f  ry++llmg+f +y+G++ynd+f+  ln fgs+w++++ l +k   t++  eg         ypfg+dp+w++ +n+Llf ns+kmklsvi+G+++mt+g++l   n + ++++ld + +fip lif +  +gY+v+li+
  MMETSP1325-20131115|6748_1   2 HTLNLFKADVSGMLRAEGWVVESSMGKVQAALTKAHKNMDDGATALLEpVPKPWPTAPTYFETNKFTYPFQEFVDTYGVPRYKEANPALFTAVTFPFLFGVMYGDIGHGFVIFLGGLMLVLSERSMENKKmDEMSAGVFAARYMFLLMGAFGVYAGIVYNDFFAIGLNWFGSEWEWKHGLDTKSGTTANMTEGcsygdatcIYPFGVDPAWHISTNELLFFNSMKMKLSVIIGILQMTVGICLKGLNALFFEEQLDFFFEFIPMLIFDMAFFGYMVVLIF 281
                 89*********************************99998866666651556789**************************************************************************************************************************997777777777777788999999****************************************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.47s 00:00:00.93 Elapsed: 00:00:00.64
# Mc/sec: 1055.89
//
Query:       MMETSP1325-20131115|6752_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 776.21
//
Query:       MMETSP1325-20131115|6753_1  [L=343]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 1580.67
//
Query:       MMETSP1325-20131115|6758_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.06   13.2   0.0      0.092   12.6   0.0    1.3  1  PF00868.15 Transglutaminase family
       0.13   11.7   0.0       0.14   11.6   0.0    1.0  1  PF12852.2  Cupin


Domain annotation for each model (and alignments):
>> PF00868.15  Transglutaminase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.3e-05     0.092      25      50 ..      30      55 ..      19      62 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.3e-05
                -SEEEE---EEEEEEE----.----- CS
  PF00868.15 25 erlvvRRGqpFsiklelnrpflpskd 50
                + + +RRG+pF++ +++  p++p+ +
  MMETSP1325-20131115|6758_1 30 NVVAIRRGAPFQLGIDCIDPHRPALK 55
                56789************999887765 PP

>> PF12852.2  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     2e-05      0.14      37      81 ..       9      51 ..       4      68 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2e-05
   PF12852.2 37 afhlvlrGscwlrvpgggepvrLsagdvvllprgeahvla...dspgt 81
                +fh+ l G +w  + +     +L+ g vv ++rg++++l     +p++
  MMETSP1325-20131115|6758_1  9 SFHIQLNGGLWADMYE-----QLRWGNVVAIRRGAPFQLGidcIDPHR 51
                69***********665.....7*****************622233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.60
# Mc/sec: 275.58
//
Query:       MMETSP1325-20131115|6754_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 836.55
//
Query:       MMETSP1325-20131115|6757_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0001   22.3   5.9    0.00014   21.8   4.1    1.1  1  PF00804.20 Syntaxin
  ------ inclusion threshold ------
      0.078   12.8   1.2       0.11   12.3   0.8    1.2  1  PF08654.5  DASH complex subunit Dad2


Domain annotation for each model (and alignments):
>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   4.1   2.1e-08   0.00014       5     100 ..      53     144 ..      51     146 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 2.1e-08
  PF00804.20   5 ffeqveeIrgeiekisekveelkrlhsrilaspdpdkqtkeeleeltaeikklankirskLksleqsieqeegqnrssadlrirktqhstlsrkFk 100
                 ++++  +I   +ek++    e++r++ r ++s d+  ++++ + + ++  k+   ++r ++k  + +   +e  ++++++++++  ++ +l r+F+
  MMETSP1325-20131115|6757_1  53 VNSKLRDITTGLEKLQRVRAEVARMADRVGTSSDSM-ELRDNISKYIGMCKQAQVAVRERIKTEQAE---RERAQETEQVDKLQLQKVIKLEREFE 144
                 578899****************************76.9************************87777...78999*******************97 PP

>> PF08654.5  DASH complex subunit Dad2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.8   1.7e-05      0.11      18      88 ..      56     125 ..      53     140 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.7e-05
   PF08654.5  18 elrelsddLakqleeLeeklstlkdgteavasvlanWdnvlraislaslkllkyseedyeeeaedeeeeke 88 
                 +lr+++  L  +l+++ +++ +++d   + +  ++  dn+ ++i + + + + + e  ++e+ae e+++++
  MMETSP1325-20131115|6757_1  56 KLRDITTGLE-KLQRVRAEVARMADRVGTSSDSMELRDNISKYIGMCKQAQVAVRERIKTEQAERERAQET 125
                 7899999996.6*************888888***************9998888887655555544443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1119  (0.0818461); expected 273.4 (0.02)
Passed bias filter:                      529  (0.0386922); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 682.04
//
Query:       MMETSP1325-20131115|6760_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        83  (0.0060708); expected 273.4 (0.02)
Passed bias filter:                       62  (0.00453482); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 382.50
//
Query:       MMETSP1325-20131115|6761_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|6762_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.5   0.1       0.11   12.3   0.0    1.2  1  PF02975.9 Methylamine dehydrogenase, L chain


Domain annotation for each model (and alignments):
>> PF02975.9  Methylamine dehydrogenase, L chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.2e-06      0.11       7      55 ..      21      69 ..      14      99 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.2e-06
                --BSS-TTSTTBGGGTT----BGGG-----SS-----EE-S--EEEEEE CS
   PF02975.9  7 kpqdkdikacdywrhcsidgnlcdcsggsltscppgtklataswvascy 55
                +   ++++  dy  h++ d  l  c+  s t   p t+la     + c 
  MMETSP1325-20131115|6762_1 21 QASAHNTRVRDYHLHATSDAALWRCAASSETPLEPPTELAGRLISSVCS 69
                4556778899*****************************9865554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 637.21
//
Query:       MMETSP1325-20131115|6765_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0077   15.4   0.2     0.0082   15.3   0.2    1.1  1  PF10649.4 Protein of unknown function (DUF2478)


Domain annotation for each model (and alignments):
>> PF10649.4  Protein of unknown function (DUF2478)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2     6e-07    0.0082       7      49 ..      17      61 ..      11      74 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 6e-07
   PF10649.4  7 edgeeadalL..aefaerlaaaGvrvaGlvqrneeeeeakecdme 49
                 ++e+++++L  +e+a++l+ +G+r +G+vq+ +++++++  ++e
  MMETSP1325-20131115|6765_1 17 GAEEDVERTLdeQEVAKDLRVNGLRAGGVVQELRDHHADRVGEVE 61
                566777788833579*****************9777777665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 339.85
//
Query:       MMETSP1325-20131115|6767_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1073.37
//
Query:       MMETSP1325-20131115|6771_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.32s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|6773_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 366.50
//
Query:       MMETSP1325-20131115|6776_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.7    6.9   8.1       0.17   10.8   2.1    1.5  2  PF06626.7 Protein of unknown function (DUF1152)


Domain annotation for each model (and alignments):
>> PF06626.7  Protein of unknown function (DUF1152)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.1   1.3e-05      0.17     117     139 ..      15      37 ..       9      40 .. 0.89
   2 ?   -1.4   0.2     0.067   9.1e+02       6      16 ..      40      50 ..      37      67 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.3e-05
   PF06626.7 117 gidkivgvDvGGDvLakGceetl 139
                 g+ +ivgv vGGDv++ G+ e++
  MMETSP1325-20131115|6776_1  15 GVGMIVGVNVGGDVVGPGDGEKV 37 
                 7899**************99987 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.067
   PF06626.7  6 GGGGDvvsaav 16
                 GGG +v ++v
  MMETSP1325-20131115|6776_1 40 VGGGEMVGTLV 50
                56666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|6766_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 1103.32
//
Query:       MMETSP1325-20131115|6778_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 334.59
//
Query:       MMETSP1325-20131115|6777_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-07   28.8   0.0    1.1e-06   28.7   0.0    1.1  1  PF13460.1  NADH(P)-binding
     0.0092   14.6   0.1      0.011   14.3   0.1    1.1  1  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family


Domain annotation for each model (and alignments):
>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   1.6e-10   1.1e-06      39     153 ..      27     152 ..       5     154 .] 0.73

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 1.6e-10
   PF13460.1  39 sgvtivkkDlfdledlaealagvdvvvdafgarpe......d...regvkhlldalkaagvrrlvvvsaaglyr.dkpgl.felldkplfkeylrakaaaeelleasgldwtivrPaalfeaeett 153
                 ++  i+ +D++d ++l+ a +gv ++ +a+g + +      +     gv++++++l+a   +r   ++++ +   ++ g+ + +  + + +++l  k +ae++l asg++ t+v P +l + e+++
  MMETSP1325-20131115|6777_1  27 ESEGIYLGDVTDAATLEPATDGVTALAIAVGVGGNataevmEaveFHGVQNQVSSLAASARKRGAALTSLNVALiSSMGTtDPDPAPYEGGDVLFYKLNAEAFLGASGVPATVVKPCGLGDGEGSQ 152
                 5556889***********************9988866655515557788888888877555554444444433324444312222334449999************************99988765 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   1.6e-06     0.011      29     102 ..      11      81 ..       3     103 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.6e-06
  PF01073.14  29 ldlrespelleelsklqvktvlegDvtdkekleealegvdvvihtaaiidvlgkaerdeilkvnvkGTqnvlea 102
                  d++e +e+l  ++  + + +  gDvtd+++le a++gv +   +a ++ v g+a+ + + +v  +G qn +++
  MMETSP1325-20131115|6777_1  11 TDIDEAREVLGCTACDESEGIYLGDVTDAATLEPATDGVTA---LAIAVGVGGNATAEVMEAVEFHGVQNQVSS 81 
                 45555555544444334444899***************986...566799*******************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 709.69
//
Query:       MMETSP1325-20131115|6780_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   14.6   3.6      0.027   14.3   2.5    1.0  1  PF10146.4  Zinc finger-containing protein
      0.028   13.7   2.0      0.032   13.5   1.4    1.0  1  PF00566.13 Rab-GTPase-TBC domain
       0.06   12.4   0.7      0.065   12.3   0.5    1.0  1  PF05461.6  Apolipoprotein L
       0.23   10.8   4.6       0.28   10.5   3.2    1.1  1  PF07352.7  Bacteriophage Mu Gam like protein
       0.27    9.9   3.6       0.32    9.7   2.5    1.0  1  PF04111.7  Autophagy protein Apg6
       0.33   10.3   2.9       0.38   10.1   2.0    1.2  1  PF03112.9  Uncharacterized protein family (ORF7) DUF
        1.7    7.3   4.7          2    7.1   3.3    1.0  1  PF14362.1  Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   2.5   1.4e-05     0.027      22      82 ..      19      77 ..       9      84 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.4e-05
   PF10146.4 22 kevealeaeEkllkeykkeleeLlkEkmsHvEelrqihaDindlEniikqseeekekrlek 82
                + v+ l++e+k l+e  + ++eL++ k  H+   +qi+ D  + E++i+  ++ek+ +l++
  MMETSP1325-20131115|6780_1 19 QRVKRLDQEDK-LTEL-QAIDELNRTKDRHTAREKQIDRDLKATEKEIRAFQTEKQTKLNQ 77
                55666666555.6676.5689*****************************99999988775 PP

>> PF00566.13  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.4   1.7e-05     0.032       6      72 ..      11      77 ..       6      80 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.7e-05
  PF00566.13  6 evWklllgykpkvkrlksseekqeeskkqksklekeedskeesqIkkDvpRtfped..elfkneegqnq 72
                +v+   l++  +vkrl+++++  e +  ++ + +k+++   e+qI++D++ t  e   ++ +++ + nq
  MMETSP1325-20131115|6780_1 11 AVYESVLEQ--RVKRLDQEDKLTELQAIDELNRTKDRHTAREKQIDRDLKATEKEIraFQTEKQTKLNQ 77
                567777777..899***********************9999***********99553233333344455 PP

>> PF05461.6  Apolipoprotein L
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.5   3.3e-05     0.065     154     216 ..      12      74 ..       7      89 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.3e-05
   PF05461.6 154 vsnslaeakasrlvetskdelkelkevlkkiaeellslsenvlkalkgikknirairlakanp 216
                 v++s  e++++rl ++ k +  ++ + l++ + + +  ++++ ++lk+ +k+ira+++ k+ +
  MMETSP1325-20131115|6780_1  12 VYESVLEQRVKRLDQEDKLTELQAIDELNRTKDRHTAREKQIDRDLKATEKEIRAFQTEKQTK 74 
                 77888899999999988877777788899999*************************999654 PP

>> PF07352.7  Bacteriophage Mu Gam like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.2   0.00015      0.28      10      67 ..      19      76 ..      15      81 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00015
   PF07352.7 10 rkigelkreieeieeeandeiarieekykaeleplkkeieyleslveeYceanreelp 67
                ++++ l++e++ +e +a de +r +++++a  ++ ++ ++  e+++ ++ ++++++l 
  MMETSP1325-20131115|6780_1 19 QRVKRLDQEDKLTELQAIDELNRTKDRHTAREKQIDRDLKATEKEIRAFQTEKQTKLN 76
                57899*********************************************99999886 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.5   0.00016      0.32      51     111 ..      13      76 ..       7      85 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00016
                 XXXXXXXXXXX..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXX CS
   PF04111.7  51 ylekLesqnkeeenveal..dseldeLkkeeerlleeleelekeedkldeeleelqeeke.kle 111
                 y + Le++ k  ++ ++l   + +deL++ ++r   + ++++++ +  ++e++  q ek+ kl+
  MMETSP1325-20131115|6780_1  13 YESVLEQRVKRLDQEDKLteLQAIDELNRTKDRHTAREKQIDRDLKATEKEIRAFQTEKQtKLN 76 
                 7778888776655444331156789999999999999999999999999999998877651444 PP

>> PF03112.9  Uncharacterized protein family (ORF7) DUF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.0    0.0002      0.38      72     111 ..      26      64 ..      12      78 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0002
   PF03112.9  72 LekslveieslkvElnkienenkkkekpikdlLkikidei 111
                  e +l+e+++   Eln+ + +++ +ek+i   Lk   +ei
  MMETSP1325-20131115|6780_1  26 QEDKLTELQAID-ELNRTKDRHTAREKQIDRDLKATEKEI 64 
                 467899999885.9********************988777 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.3     0.001         2     107     234 ..      14      73 ..       7      80 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.001
   PF14362.1 107 ekeIdtelkekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaeleankrkaaleeeraakvaeeqa 234
                 e+ +++++k+  qe++ +  +++++                                                                  l+++k +++a++++++  + ++a+e+e+ a ++e+q+
  MMETSP1325-20131115|6780_1  14 ESVLEQRVKRLDQEDKLTELQAIDE------------------------------------------------------------------LNRTKDRHTAREKQID--RDLKATEKEIRAFQTEKQT 73 
                 5555555555555555555555555..................................................................3333333444444444..4444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1366  (0.0999122); expected 273.4 (0.02)
Passed bias filter:                      789  (0.0577092); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.45u 0.45s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|6779_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0036   17.1   0.0     0.0044   16.9   0.0    1.1  1  PF02204.13 Vacuolar sorting protein 9 (VPS9) domain


Domain annotation for each model (and alignments):
>> PF02204.13  Vacuolar sorting protein 9 (VPS9) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   3.2e-07    0.0044      79     103 ..       3      27 ..       1      28 [. 0.89

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 3.2e-07
  PF02204.13  79 kllsgeegYylttlqaavefienle 103
                 + l ++ gY++++l +a+efi +l+
  MMETSP1325-20131115|6779_1   3 QALMSKSGYCFVNLRSAIEFILTLD 27 
                 678899***************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|6781_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 230.59
//
Query:       MMETSP1325-20131115|6784_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 275.14
//
Query:       MMETSP1325-20131115|6786_1  [L=308]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.9   0.0       0.11   12.4   0.0    1.9  1  PF13659.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     8e-06      0.11      56      83 ..     158     185 ..      22     196 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8e-06
   PF13659.1  56 qgdlrdlaellragsfdlvvtnpPygpr 83 
                   d+ ++ e+ + + fd++vtnpPy  +
  MMETSP1325-20131115|6786_1 158 DEDFYKAIEENTVPDFDVLVTNPPYSSD 185
                 445555566778899**********855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       741  (0.0541984); expected 273.4 (0.02)
Passed bias filter:                      494  (0.0361322); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.42s 00:00:01.08 Elapsed: 00:00:00.51
# Mc/sec: 1447.21
//
Query:       MMETSP1325-20131115|6789_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|6785_1  [L=455]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-38  127.6  10.8    7.1e-09   35.1   0.0    9.9  9  PF00400.27 WD domain, G-beta repeat
    3.8e-06   26.4   0.3    0.00037   19.9   0.2    3.1  1  PF13360.1  PQQ-like domain
    7.2e-05   21.0   4.0      0.097   10.7   0.0    3.4  3  PF11715.3  Nucleoporin Nup120/160
      0.008   16.2   1.9        6.6    7.0   0.2    4.7  5  PF13570.1  YWTD domain
  ------ inclusion threshold ------
      0.015   13.9   0.2        3.7    6.1   0.0    3.3  2  PF08801.6  Nup133 N terminal like
      0.029   12.5   0.1       0.37    8.9   0.0    2.6  3  PF02239.11 Cytochrome D1 heme domain


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1      0.05   1.1e+02      22      35 ..      89     109 ..      47     113 .. 0.52
   2 ?    2.3   0.0     0.069   1.6e+02      12      23 ..     126     138 ..     125     150 .. 0.76
   3 !   29.1   0.1   2.3e-10   5.3e-07       4      39 .]     160     196 ..     157     196 .. 0.94
   4 ?    2.1   0.0     0.075   1.7e+02      15      36 ..     215     234 ..     211     236 .. 0.90
   5 !   19.3   0.0     3e-07   0.00069       8      39 .]     249     280 ..     246     280 .. 0.95
   6 !   15.3   0.1   5.5e-06     0.013       2      39 .]     285     322 ..     284     322 .. 0.93
   7 !    5.9   0.0    0.0048        11      12      39 .]     337     364 ..     331     364 .. 0.94
   8 !   11.4   0.0   9.1e-05      0.21      22      39 .]     379     409 ..     365     409 .. 0.70
   9 !   35.1   0.0   3.1e-12   7.1e-09       2      39 .]     414     451 ..     413     451 .. 0.95

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.05
                 S.......STEEEEEETTSEE CS
  PF00400.27  22 d.......gpllasgSrDgti 35 
                         +  l+ g+ Dgt+
  MMETSP1325-20131115|6785_1  89 GilsllcwPEGLVVGGGDGTV 109
                 033333334467777777877 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.069
                 SSEEEEEEESS.S CS
  PF00400.27  12 spVtcvafspd.g 23 
                 +pV +++fspd  
  MMETSP1325-20131115|6785_1 126 GPVASLSFSPDkV 138
                 7999******953 PP

  == domain 3    score: 29.1 bits;  conditional E-value: 2.3e-10
                 EEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27   4 katlrgHtspVtcvafspd.gpllasgSrDgtirlWd 39 
                 + +++ H ++V  ++f+pd + ++a+ S+D+tir+Wd
  MMETSP1325-20131115|6785_1 160 LLVCENHAAAVKRISFAPDaSDRFATLSSDCTIRVWD 196
                 678999******************************9 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.075
                 EEEEEESSSTEEEEEETTSEEE CS
  PF00400.27  15 tcvafspdgpllasgSrDgtir 36 
                 +c+a+  d  ++++g +Dg +r
  MMETSP1325-20131115|6785_1 215 NCLAYTLD--FIITGWEDGRVR 234
                 78999999..*********998 PP

  == domain 5    score: 19.3 bits;  conditional E-value: 3e-07
                 ESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   8 rgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 ++H ++V++++ s + +++ +g+  g +r+W+
  MMETSP1325-20131115|6785_1 249 QAHRAGVSALCLSNNERYIMTGGGEGDVRIWE 280
                 79*****************************6 PP

  == domain 6    score: 15.3 bits;  conditional E-value: 5.5e-06
                 EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   2 eckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 e+++ l++Ht pVt++a   d  + +s+SrD+    Wd
  MMETSP1325-20131115|6785_1 285 ELVSHLKEHTLPVTSLALYGDDVHALSCSRDRAFLCWD 322
                 67899***************************988887 PP

  == domain 7    score: 5.9 bits;  conditional E-value: 0.0048
                 SSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  12 spVtcvafspdgpllasgSrDgtirlWd 39 
                 ++++ +a s+d++++++ +  + +  Wd
  MMETSP1325-20131115|6785_1 337 GGINGIALSQDQTMVITVGQEKRLTCWD 364
                 689*****************99999998 PP

  == domain 8    score: 11.4 bits;  conditional E-value: 9.1e-05
                 S.............STEEEEEETTSEEEEEE CS
  PF00400.27  22 d.............gpllasgSrDgtirlWd 39 
                 d             g+++a+g+    ++lWd
  MMETSP1325-20131115|6785_1 379 DmsdealtvavsssGKYIATGGTAQMLKLWD 409
                 55555555555555********99******9 PP

  == domain 9    score: 35.1 bits;  conditional E-value: 3.1e-12
                 EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   2 eckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                 +++a+++gH++++++++fspd + l+s ++Dg i +W+
  MMETSP1325-20131115|6785_1 414 KLIASCEGHSGAINDLKFSPDDKQLVSVGADGIILVWN 451
                 678899*******************************7 PP

>> PF13360.1  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.2   1.6e-07   0.00037      81     234 ..     176     370 ..      19     374 .. 0.74

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.6e-07
   PF13360.1  81 vvtadnslvaldaetGkllWssqlrse.piarlrssaspaia...gdrvivgfssgklvaldlktGkvlWerpl.aapr................................gsselsrlgdiagrpviaggrvfassgsgr..llaldlatgrrl.W.skp.issinglpildgdvlyvvs.ddgelvaldlktGkv 234
                 + +a++++++l++    ++W s + s+  ++++r +++p       d +i g ++g++ a +  +G+ lW     ++                                    s+l + + + +++ + g++v a s s+   +l++dl++ rrl       +++ing+ +  +++++++  ++ +l+++dl +++ 
  MMETSP1325-20131115|6785_1 176 APDASDRFATLSSDCTIRVWDSSDYSVlTTVTVRDAGEPNCLaytLDFIITGWEDGRVRAHESDSGQFLWLIDQaHR-AgvsalclsnneryimtgggegdvriwemrsreLVSHLKEHTLPVTSLALYGDDVHALSCSRDraFLCWDLRNERRLtShV-QrMGGINGIALSQDQTMVITVgQEKRLTCWDLRDHNP 370
                 333555777777777777888666665566666666666655667999999999**************999988444.358999999999999999999888887774333222222444444555555899999998885569*********995444.45******7777777777777889********99875 PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1   0.00012      0.27     232     261 ..     181     215 ..     157     264 .. 0.73
   2 !   10.7   0.0   4.2e-05     0.097     224     276 ..     345     392 ..     337     404 .. 0.74
   3 ?   -1.0   0.0      0.14   3.3e+02     242     260 ..     404     422 ..     395     442 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00012
   PF11715.3 232 tfvftlsrDgkLRvWnletgqclrttdil.....e 261
                 +  +tls D ++RvW+ ++++ l+t++++     +
  MMETSP1325-20131115|6785_1 181 DRFATLSSDCTIRVWDSSDYSVLTTVTVRdagepN 215
                 4446**********************999544440 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 4.2e-05
   PF11715.3 224 sssevegqtfvftlsrDgkLRvWnletgqclrttdil.....eaaellpadslsyipe 276
                 s+    +qt+v+t+ + ++L  W+l+++  +++td++     e      a +++++++
  MMETSP1325-20131115|6785_1 345 SQ----DQTMVITVGQEKRLTCWDLRDHNPIKVTDLSpdmsdE------ALTVAVSSS 392
                 44....9******************************333322......333333332 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.14
   PF11715.3 242 kLRvWnletgqclrttdil 260
                  L++W+++t++++++ +  
  MMETSP1325-20131115|6785_1 404 MLKLWDYATMKLIASCEGH 422
                 59**********8887665 PP

>> PF13570.1  YWTD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.34   7.6e+02      15      33 ..      49      69 ..      40      75 .. 0.78
   2 !    7.0   0.2    0.0029       6.6      24      38 ..     100     114 ..      98     115 .. 0.89
   3 ?    3.0   0.0      0.05   1.1e+02       7      39 ..     122     155 ..     121     156 .. 0.79
   4 ?   -2.7   0.0       3.3   7.5e+03      25      35 ..     223     235 ..     223     236 .. 0.76
   5 ?   -1.2   0.0       1.1   2.4e+03      24      40 .]     351     367 ..     336     367 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.34
   PF13570.1 15 sspavdgg..lvyvgtgdGrl 33
                +++a++++  ++y +t+ G +
  MMETSP1325-20131115|6785_1 49 TGLAFSDDkeTIYCATTSGDF 69
                57789887346*****99976 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0029
   PF13570.1  24 vyvgtgdGrlyAlDa 38 
                 ++vg+gdG+++ +Da
  MMETSP1325-20131115|6785_1 100 LVVGGGDGTVTTFDA 114
                 689999********8 PP

  == domain 3    score: 3.0 bits;  conditional E-value: 0.05
   PF13570.1   7 ydtpgpvnsspavdggl..vyvgtgdGrlyAlDae 39 
                 ++++gpv +s++++ ++  v +gt+ G +y l ++
  MMETSP1325-20131115|6785_1 122 VQLSGPV-ASLSFSPDKveVIAGTSTGFVYRLRMD 155
                 7888888.78888866557999********99876 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 3.3
   PF13570.1  25 yvgtg..dGrlyA 35 
                 ++ tg  dGr++A
  MMETSP1325-20131115|6785_1 223 FIITGweDGRVRA 235
                 56666789**987 PP

  == domain 5    score: -1.2 bits;  conditional E-value: 1.1
   PF13570.1  24 vyvgtgdGrlyAlDaet 40 
                 v  ++   rl++ D ++
  MMETSP1325-20131115|6785_1 351 VITVGQEKRLTCWDLRD 367
                 45555589****99886 PP

>> PF08801.6  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0016       3.7     199     222 ..     179     200 ..     156     215 .. 0.77
   2 ?    3.6   0.0    0.0088        20     247     283 ..     343     395 ..     229     441 .. 0.59

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0016
   PF08801.6 199 ssrrilytlsskgtirvwdlspsg 222
                  s +   tlss++tirvwd s + 
  MMETSP1325-20131115|6785_1 179 AS-DRFATLSSDCTIRVWDSS-DY 200
                 44.4689************97.33 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.0088
   PF08801.6 247 a.....................atilsskslkildispvsaeessllllvaitsngvr 283
                 a                           + +k++d+sp +++e   +l va++s+g  
  MMETSP1325-20131115|6785_1 343 AlsqdqtmvitvgqekrltcwdL--RDHNPIKVTDLSPDMSDE---ALTVAVSSSGKY 395
                 04444444444444444443231..223567888888888775...888888888873 PP

>> PF02239.11  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.084   1.9e+02       9      75 ..     224     291 ..     222     310 .. 0.74
   2 ?    8.9   0.0   0.00016      0.37      43     115 ..     343     418 ..     325     433 .. 0.82
   3 ?   -0.1   0.0     0.087     2e+02      17      66 ..     404     453 ..     400     454 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.084
                 EEEBTT---EEEE-----SEEEEE-------EE.EE---.--EEEEE---SEEEEEETTSSSEEEEEE CS
  PF02239.11   9 vvverdagkvalidgdskeilavlesgyalHis.rvfasdgRyvyvigRDgkltliDLwakeivaevk 75 
                  ++  ++g+v+  ++ds + l  ++  +   +s    ++++Ry+ + g +g + + ++  +e v ++k
  MMETSP1325-20131115|6785_1 224 IITGWEDGRVRAHESDSGQFLWLIDQAHRAGVSaLCLSNNERYIMTGGGEGDVRIWEMRSRELVSHLK 291
                 56666777788888888888777777666644414567778999999988888888888777776665 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00016
                 E---.--EEEEE---SEEEEEETTSSS..EEEEEE..---B----EE--TTT-EEE--TBTTEEEEE------EEEE CS
  PF02239.11  43 vfasdgRyvyvigRDgkltliDLwake..ivaevk..aGlnarsvavSqedryvivgnYlPgqlvildaetLelvkv 115
                   ++d+  v ++g + +lt  DL  ++  +v ++   +  +a  vavS  ++y+++g      l++ d  t++l++ 
  MMETSP1325-20131115|6785_1 343 ALSQDQTMVITVGQEKRLTCWDLRDHNpiKVTDLSpdMSDEALTVAVSSSGKYIATGGT-AQMLKLWDYATMKLIAS 418
                 56899******************99998766666422677999***********99974.46678888888888765 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.087
                 -EEEE-----SEEEEE-------EEEE---.--EEEEE---SEEEEEETT CS
  PF02239.11  17 kvalidgdskeilavlesgyalHisrvfasdgRyvyvigRDgkltliDLw 66 
                  ++l d ++ + +a  e++       +f++d++ +  +g Dg + +  L+
  MMETSP1325-20131115|6785_1 404 MLKLWDYATMKLIASCEGHSGAINDLKFSPDDKQLVSVGADGIILVWNLY 453
                 567888889999999999988888999***************99988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.84u 0.37s 00:00:01.21 Elapsed: 00:00:00.51
# Mc/sec: 2137.93
//
Query:       MMETSP1325-20131115|6792_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0077   16.0   0.5          5    7.4   0.2    2.3  2  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
      0.035   13.9   0.0        3.5    7.8   0.0    2.4  2  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.2   0.00073         5       2      23 ..      50      72 ..      49      73 .. 0.90
   2 !    6.8   0.0    0.0011       7.6       3      23 ..      77      97 ..      76     102 .. 0.93

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00073
   PF13516.1  2 knLtsLdLsnNq.igdeGlsaLa 23
                +nLt  +L++++ i++  + aLa
  MMETSP1325-20131115|6792_1 50 SNLTIMNLGGCKnITNAAVIALA 72
                799999*****88****999998 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0011
   PF13516.1  3 nLtsLdLsnNqigdeGlsaLa 23
                nLt ++Ls+ +i+d  + a+a
  MMETSP1325-20131115|6792_1 77 NLTIIRLSGDDITDAAVVAMA 97
                8**************999986 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00052       3.5       1      14 [.      51      65 ..      51      72 .. 0.88
   2 ?    3.8   0.0     0.011        73       1      16 [.      77     109 ..      77     115 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00052
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL++ +L g+ n+t+
  MMETSP1325-20131115|6792_1 51 NLTIMNLGGCkNITN 65
                8***********996 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.011
                 TESEEEETSSBCBC.................HH CS
  PF00560.28   1 nLeeLdLsgNnlts.................lp 16 
                 nL+++ Lsg  +t+                 +p
  MMETSP1325-20131115|6792_1  77 NLTIIRLSGDDITDaavvamaglisgkqtqqIP 109
                 89*******999976766666665555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 628.38
//
Query:       MMETSP1325-20131115|6793_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 369.44
//
Query:       MMETSP1325-20131115|6794_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 192.65
//
Query:       MMETSP1325-20131115|6799_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|6800_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.8   0.4        0.2   10.9   0.1    1.5  2  PF12160.3 Fibrinogen alpha C domain


Domain annotation for each model (and alignments):
>> PF12160.3  Fibrinogen alpha C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   1.5e-05       0.2      27      51 ..      10      34 ..       9      41 .. 0.88
   2 ?   -1.9   0.0      0.15     2e+03      41      51 ..      40      50 ..      36      62 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.5e-05
   PF12160.3 27 gpdGrkevikEvvnsedGsdCgdlg 51
                +pdGr  v+ Evv   dGs+  ++g
  MMETSP1325-20131115|6800_1 10 QPDGRGRVMAEVVLELDGSEVDGGG 34
                59*****************987765 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.15
   PF12160.3 41 sedGsdCgdlg 51
                se+G  C ++g
  MMETSP1325-20131115|6800_1 40 SEGGEVCLGTG 50
                56666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.45
# Mc/sec: 420.69
//
Query:       MMETSP1325-20131115|6801_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 604.54
//
Query:       MMETSP1325-20131115|6796_1  [L=395]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-10   39.1   0.7    6.4e-10   38.4   0.5    1.4  1  PF02209.14 Villin headpiece domain
  ------ inclusion threshold ------
       0.51    9.1   3.0       0.73    8.6   2.1    1.1  1  PF00242.12 DNA polymerase (viral) N-terminal domain


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.5   9.4e-14   6.4e-10       1      35 [.     360     394 ..     360     395 .] 0.98

  Alignments for each domain:
  == domain 1    score: 38.4 bits;  conditional E-value: 9.4e-14
                 GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT- CS
  PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgL 35 
                 YLs e+F +vF + +  F   P+WK++++Kk++gL
  MMETSP1325-20131115|6796_1 360 YLSNEEFFDVFSIDRAKFSTYPQWKRDKMKKEVGL 394
                 9*********************************9 PP

>> PF00242.12  DNA polymerase (viral) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.1   0.00011      0.73     250     328 ..     222     300 ..     205     329 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00011
  PF00242.12 250 lglqakqgklakeqqgrslalrarkessarrsvgvedsssrvksnrasksssslsqsavretaysslstserasssesa 328
                 l++ +  g++a++  ++s +++ + ++s + s  + +ss +v++n+as ++  l  ++ r+ +  s+ + e+ +s+  +
  MMETSP1325-20131115|6796_1 222 LKSPSAGGRTASSDSSSSATSSVGDRGSRTSSALMMPSSITVDENTASMAAMALAAASRRKLSVASDGSAEESTSTVAS 300
                 66677889999999*************************************************9999999877666332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1660.63
//
Query:       MMETSP1325-20131115|6805_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 438.58
//
Query:       MMETSP1325-20131115|6808_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-12   45.8   0.0    5.5e-12   45.3   0.0    1.2  1  PF00534.15 Glycosyl transferases group 1
    1.3e-07   31.6   0.0    2.4e-07   30.8   0.0    1.4  1  PF13692.1  Glycosyl transferases group 1
    9.9e-07   28.8   0.0    1.8e-06   28.0   0.0    1.4  1  PF13524.1  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> PF00534.15  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   1.2e-15   5.5e-12      73     171 ..      59     169 ..      51     170 .. 0.89

  Alignments for each domain:
  == domain 1    score: 45.3 bits;  conditional E-value: 1.2e-15
                 EE-----HHH....HHHHHTTECEEEE--SSB---HHHHHHHH----EEEE-.TTBCCGGG-SSG.............GGEE-TT-HHHHHHHHHHHHH-HHHHHHHHHHHHH CS
  PF00534.15  73 dnvifvgevp.redleelyrnadifvlpsrsEgfGivllEAmaaglpviasn.vggpaeivkdgv............tGllvkpkdaealaeaiekllkdeelrerlgenark 171
                  +v ++ge   ++ +++l+ ++d fvlp r Eg+G+ ++EAma+g+pvia+  ++gp  ++++              tG+  ++   + l e ++++ +++ ++e+ g +ar+
  MMETSP1325-20131115|6808_1  59 PHVVWIGETLsKQGMRDLIYRCDSFVLPTRGEGWGLPIVEAMAMGKPVIATGdHSGPTAYMTEENsyplrsvgveeqTGFSMPSV--AHLRELMRRIYTQRAEAEARGARARR 169
                 578888888779999************************************99********999999999999998888888886..99999999999999888888888876 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   5.3e-11   2.4e-07      46     110 ..      54     120 ..      19     137 .. 0.77

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 5.3e-11
   PF13692.1  46 elarllepnveflgfv..ee.laellasadvglaplrfgeglplKlleylaaGlPvvasdi..gaeglpe 110
                 +l +l  p+v + g+    + + +l+ ++d +++p+r geg +l ++e++a+G+Pv+a+    g+ ++  
  MMETSP1325-20131115|6808_1  54 RLSQL--PHVVWIGETlsKQgMRDLIYRCDSFVLPTR-GEGWGLPIVEAMAMGKPVIATGDhsGPTAYMT 120
                 46665..89*****9986445***************8.**99999*************998766666554 PP

>> PF13524.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   3.9e-10   1.8e-06       4      90 ..      85     184 ..      82     186 .. 0.91

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 3.9e-10
   PF13524.1   4 npsrsespnlrlfEaaacGtpvvtddt.sgleelfepgk............eivlfedleelaeklryllanpeereaiaeaarervlaehtyehraeql 90 
                  p+r e+  l + Ea+a+G pv+++   sg   + ++++            +++  ++++ l e +r+ + +++e+ea +++ar++v  +++ e++ e l
  MMETSP1325-20131115|6808_1  85 LPTRGEGWGLPIVEAMAMGKPVIATGDhSGPTAYMTEENsyplrsvgveeqTGFSMPSVAHLRELMRRIYTQRAEAEARGARARRDVHLRFHPERVRELL 184
                 6888999999*************9966799999999999**********99999999******************************9999988766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.51
# Mc/sec: 1010.23
//
Query:       MMETSP1325-20131115|6811_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|6810_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0017   17.2   5.2     0.0062   15.4   3.1    1.8  2  PF02535.17 ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.9   0.2    0.0029        39     183     214 ..       7      38 ..       5      43 .. 0.86
   2 !   15.4   3.1   4.5e-07    0.0062      16     105 ..      25     113 ..      14     216 .. 0.54

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.0029
  PF02535.17 183 glHsfidGLAiGvsssedtgislflAvllHel 214
                 g++ ++ GLA+G++ +++   ++ +Av++ e 
  MMETSP1325-20131115|6810_1   7 GIDAATGGLAFGLTCAAGMCTTIGAAVVFNEK 38 
                 6788999***********99999999999775 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 4.5e-07
  PF02535.17  16 llgllgpllvplmsrl..sasklvlslllafavGvllgtaflhLlpealealeesdcveefeeshplkgllvllGffllllleelltmikes 105
                 ++ ++g+++v + ++l   a k +l   l  ++Gv+l+ +f+ ++ +++++ + +  +e  ++ h l+ l+++ G+ l  ll+ +++ + ++
  MMETSP1325-20131115|6810_1  25 MCTTIGAAVV-FNEKLaaYANKQFLAGSLGVSAGVMLYVSFIEIFFKSQGSFQDAGYLE--GQAHALAVLCFFSGIGLGNLLDFFVHWLEGK 113
                 2222222222.222222334455666666666777777777777777777665544433..4455677777777777777777777555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 1073.57
//
Query:       MMETSP1325-20131115|6807_1  [L=495]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0043   16.6   3.2     0.0043   16.6   2.2    5.3  5  PF04859.7 Plant protein of unknown function (DUF641)
     0.0053   16.7   1.5      0.038   14.0   1.0    2.6  1  PF05321.6 Haemolysin expression modulating protein
     0.0064   16.3   4.1     0.0064   16.3   2.8    4.7  5  PF10205.4 Predicted coiled-coil domain-containing protein
  ------ inclusion threshold ------
        4.5    7.4  42.4        1.3    9.2   9.4    3.1  3  PF03234.9 Cdc37 N terminal kinase binding


Domain annotation for each model (and alignments):
>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.2   1.3e-06    0.0043      47     106 ..      63     122 ..      56     132 .. 0.93
   2 !    8.7   0.1   0.00037       1.3      84     127 ..     163     206 ..     149     213 .. 0.82
   3 ?    0.8   2.5     0.098   3.4e+02      74     128 ..     252     306 ..     226     310 .. 0.81
   4 ?    3.6   0.6     0.014        46      93     127 ..     359     393 ..     304     399 .. 0.79
   5 ?   -2.3   4.9      0.92   3.1e+03      57     128 ..     395     466 ..     391     470 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.3e-06
   PF04859.7  47 ADkavvaeLkkLselkrlyrrkeakgsakdailaaeiqeqrsllktyeivvkkLeaelra 106
                  D a+ aeL++L++  +  r++ a+++  +  l+a +qeq + l+++e  +++L+++lr 
  MMETSP1325-20131115|6807_1  63 VDGAIMAELEQLRAQAQEAREQIANADRAQDDLKASLQEQEETLRNRENELQHLHRQLRY 122
                 599******************************************************985 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00037
   PF04859.7  84 qeqrsllktyeivvkkLeaelrakdseieelrekleeakkankk 127
                 +e  +l +   ++++ L+  +++k+  ie++r+klee  ++ ++
  MMETSP1325-20131115|6807_1 163 DEREKLQRVASTTINSLQGIVEEKNRMIEKMRRKLEETRAEMRR 206
                 55566667788999*********************988766554 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.098
   PF04859.7  74 akdailaaeiqeqrsllktyeivvkkLeaelrakdseieelrekleeakkankkl 128
                   +++l+ +++eq  + + +e vv++Le +l + + + ++++++ +ea+++ +k+
  MMETSP1325-20131115|6807_1 252 DMNRRLLDQLEEQADAARRREEVVNELELKLVTANNKTQRAEARCTEALQEIEKM 306
                 45678889999*****************999999999999999888888776665 PP

  == domain 4    score: 3.6 bits;  conditional E-value: 0.014
   PF04859.7  93 yeivvkkLeaelrakdseieelrekleeakkankk 127
                  ++ ++ L+++l akd+++  lr ++ ++k++ +k
  MMETSP1325-20131115|6807_1 359 VNKKIQYLQEQLGAKDKKVAALRLAIVNLKREFEK 393
                 4556788***************9999887776555 PP

  == domain 5    score: -2.3 bits;  conditional E-value: 0.92
   PF04859.7  57 kLselkrlyrrkeakgsakdailaaeiqeqrsllktyeivvkkLeaelrakdseieelrekleeakkankkl 128
                 ++++lk+  +++e+k + + + ++a  ++  +l  +   + k+L+++  + ++e+ ++r++ ++ k+++ +l
  MMETSP1325-20131115|6807_1 395 EVANLKQDLANEEEKEDSGAKDNEALRDQVIELNDKLGLMHKQLQKKQLQAEEEVVKARQQAKKFKVERDRL 466
                 577889999999999998888888888888888888889999999988888999999999999888887776 PP

>> PF05321.6  Haemolysin expression modulating protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   1.0   1.1e-05     0.038      12      48 ..     186     223 ..     176     225 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHHHHS-HH.HHHHHHHHHTHHHHHHHTTS-- CS
   PF05321.6  12 lekvieklryklsae.eleafnsAaDhRrAELtmgkLy 48 
                  +++iek+r kl+++   ++ n+AaD    EL ++k++
  MMETSP1325-20131115|6807_1 186 KNRMIEKMRRKLEETrAEMRRNAAADKHEIELLTNKMF 223
                 579**********99888999***************98 PP

>> PF10205.4  Predicted coiled-coil domain-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   2.8   1.9e-06    0.0064       5      53 ..      69     117 ..      66     144 .. 0.84
   2 ?   -0.2   2.8      0.27   9.2e+02      19      87 ..     180     254 ..     167     269 .. 0.67
   3 ?   -0.3   0.4      0.28   9.7e+02      30      54 ..     256     280 ..     249     324 .. 0.63
   4 ?    0.1   1.0      0.21   7.3e+02      60      79 ..     393     412 ..     355     424 .. 0.48
   5 ?    0.6   7.1      0.15   5.2e+02      34      86 ..     412     465 ..     391     479 .. 0.59

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.9e-06
   PF10205.4   5 qeYskLRaqakvLkkavldeqsksasLkeeLkqkeaslRkteqevdsLg 53 
                 +e  +LRaqa+  ++ + +    ++ Lk +L+++e++lR  e+e + L 
  MMETSP1325-20131115|6807_1  69 AELEQLRAQAQEAREQIANADRAQDDLKASLQEQEETLRNRENELQHLH 117
                 68889***************************************98874 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.27
   PF10205.4  19 kavldeqsks.asLkeeLkqkeaslRkt....eqevdsLg...FRnkqLerrvellqeelelsekkakkskssgdsn 87 
                 +++++e+++  ++++ +L +  a +R+     + e++ L+   FR    e  +++l++  +  e +ak ++ ++d+n
  MMETSP1325-20131115|6807_1 180 QGIVEEKNRMiEKMRRKLEETRAEMRRNaaadKHEIELLTnkmFRE--NEDAIDQLKTAAKHLEGAAKPGHGDEDMN 254
                 58999999853799***********997222234666666222333..34556666666666666666666555555 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 0.28
   PF10205.4  30 sLkeeLkqkeaslRkteqevdsLgF 54 
                  L ++L +++ + R+ e+ v+ L  
  MMETSP1325-20131115|6807_1 256 RLLDQLEEQADAARRREEVVNELEL 280
                 5667777777777776666665543 PP

  == domain 4    score: 0.1 bits;  conditional E-value: 0.21
   PF10205.4  60 errvellqeelelsekkakk 79 
                 +  v++l+++l+  e+k+  
  MMETSP1325-20131115|6807_1 393 KAEVANLKQDLANEEEKEDS 412
                 33456666666544444333 PP

  == domain 5    score: 0.6 bits;  conditional E-value: 0.15
   PF10205.4  34 eLkqkeaslRkteqe.vdsLgFRnkqLerrvellqeelelsekkakkskssgds 86 
                 +  + +++lR +  e +d Lg   kqL+++  +  ee+   +++akk k ++d+
  MMETSP1325-20131115|6807_1 412 SGAKDNEALRDQVIElNDKLGLMHKQLQKKQLQAEEEVVKARQQAKKFKVERDR 465
                 3334456788888774689********998555555555555666666633333 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.7     0.014        49      31      75 ..      75     119 ..      57     144 .. 0.62
   2 ?    5.4   8.9    0.0055        19      46     164 ..     174     310 ..     162     321 .. 0.62
   3 ?    9.2   9.4   0.00037       1.3      40     162 ..     355     485 ..     351     489 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.014
   PF03234.9  31 rwkqqaihekreqrkkeieelekelkinkkllervdkllselkee 75 
                 r++ q+  e+ ++ ++ +++l+++l+++++ l++ ++ l++l+++
  MMETSP1325-20131115|6807_1  75 RAQAQEAREQIANADRAQDDLKASLQEQEETLRNRENELQHLHRQ 119
                 455555555555555555555555555555555555555554433 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0055
   PF03234.9  46 keieelekelkinkkllervdkllselkee.eelss....ekvlkklneeadkedka.........sveeeeeeqpkynemledLldqvkdevdekk.....aaklieelkkhrkklkkeekelekkleelekeekkk 164
                   i++l+  ++++++ +e+++++l+e+++e    +     +++   +n+ + +++ a         + e + +     ++m   Lldq++++ d++       ++l  +l + ++k ++ e + ++ l+e+ek ++ +
  MMETSP1325-20131115|6807_1 174 TTINSLQGIVEEKNRMIEKMRRKLEETRAEmR-RNAaadkHEIELLTNKMFRENEDAidqlktaakHLEGAAKPGHGDEDMNRRLLDQLEEQADAARrreevVNELELKLVTANNKTQRAEARCTEALQEIEKMKADM 310
                 45677777777888888888888877776632.22234444443333333333333344446654433444555556789************9998874444444444555666777777777777777777766655 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.00037
   PF03234.9  40 kreqrkkeieelekelkinkkllervdkllselkee.eelssekvlkklneeadkedkasveee..eeeqpkynemledLldqvkdevdekk.....aaklieelkkhrkklkkeekelekkleelekeek 162
                 k +  +k+i+ l+ +l  ++k+++ ++  + +lk+e e+++  ++ + l++e++ked   +++e   ++  + n+ l  + +q+++++ +++     a+++ ++ k +r++l++e  + +++l ele  ++
  MMETSP1325-20131115|6807_1 355 KNAPVNKKIQYLQEQLGAKDKKVAALRLAIVNLKREfEKAEVANLKQDLANEEEKEDSGAKDNEalRDQVIELNDKLGLMHKQLQKKQLQAEeevvkARQQAKKFKVERDRLRTEADQNDRRLGELEGDKA 485
                 5667899***************************9999999999999999999999988444431256777889988888888844333333256668899999999******************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1989  (0.14548); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                        47  (0.00343768); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.99u 0.41s 00:00:02.40 Elapsed: 00:00:00.81
# Mc/sec: 1464.44
//
Query:       MMETSP1325-20131115|6812_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-38  132.5   0.1    1.2e-38  132.4   0.1    1.0  1  PF00464.14 Serine hydroxymethyltransferase
  ------ inclusion threshold ------
       0.11   12.0   0.1        3.2    7.3   0.0    2.1  2  PF11647.3  C-terminal region of Pasteurella multocida toxin residues 569-1285


Domain annotation for each model (and alignments):
>> PF00464.14  Serine hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.4   0.1   1.8e-42   1.2e-38     237     327 ..       2      92 .]       1      92 [] 0.99

  Alignments for each domain:
  == domain 1    score: 132.4 bits;  conditional E-value: 1.8e-42
                 -----EEES....EE.....EE.HHHHHHHHHHHTTTT-----HHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT-EETT-- CS
  PF00464.14 237 prgglillrkgvksvdktgkevleelekkinsavfPglqGGPlnhviaakavalkealepefkvyqkqvlknakalaealkekgyklvsgG 327
                 prg++i++rkgv+sv+k+g e++++le+kin+avfPglqGGP+nh+iaa+a+alk+a++pe+ +yqkqv+kn+ +la+ l+ kgy+lvsgG
  MMETSP1325-20131115|6812_1   2 PRGAMIFYRKGVRSVSKKGVETMYDLEDKINFAVFPGLQGGPHNHTIAALATALKQATTPEYVEYQKQVMKNSAQLAKSLQAKGYELVSGG 92 
                 9****************************************************************************************98 PP

>> PF11647.3  C-terminal region of Pasteurella multocida toxin residues 569-1285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0   0.00047       3.2      36      52 ..      16      32 ..      11      33 .. 0.86
   2 ?    2.8   0.0     0.012        80      22      47 ..      63      88 ..      47      90 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00047
   PF11647.3 36 LgrekvetlyeLnkkie 52
                 ++++vet+y+L+ ki+
  MMETSP1325-20131115|6812_1 16 VSKKGVETMYDLEDKIN 32
                5789***********97 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.012
   PF11647.3 22 silsklelihnmklLgrekvetlyeL 47
                 +  +++ ++n+  L+++ +++ yeL
  MMETSP1325-20131115|6812_1 63 YVEYQKQVMKNSAQLAKSLQAKGYEL 88
                5666899999**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       638  (0.0466647); expected 273.4 (0.02)
Passed bias filter:                      574  (0.0419836); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.45s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 408.27
//
Query:       MMETSP1325-20131115|6813_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 690.71
//
Query:       MMETSP1325-20131115|6814_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-09   36.6   0.7    4.1e-09   36.4   0.5    1.0  1  PF00106.20 short chain dehydrogenase
    4.2e-06   26.4   0.4    4.9e-06   26.2   0.3    1.1  1  PF08659.5  KR domain
    5.8e-05   22.8   0.0    6.3e-05   22.7   0.0    1.0  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase
  ------ inclusion threshold ------
      0.025   13.1   0.6      0.058   11.9   0.4    1.5  1  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family
      0.033   12.9   0.2       0.08   11.7   0.1    1.7  1  PF07993.7  Male sterility protein
       0.12   11.5   0.0       0.13   11.5   0.0    1.2  1  PF03361.9  Herpes virus intermediate/early protein 2/3
       0.13   11.7   0.1       0.23   11.0   0.0    1.3  1  PF03681.10 Uncharacterised protein family (UPF0150)


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.5   2.1e-12   4.1e-09      30     124 ..       8     104 ..       1     107 [. 0.78

  Alignments for each domain:
  == domain 1    score: 36.4 bits;  conditional E-value: 2.1e-12
                 EEESS.SHHHHHHHHHHHHH--.-EEEEEE--TTSHHHHHHHHHHHHHH--.--SEEEEE---TT.-TTCCSC....HHHHHHHHHHHTHHHHHHHHHHHH CS
  PF00106.20  30 lvsrredapgaaeliaelealg.aevtvvacDvadrdalaallaeirkalg.pldgvvhnagvld.dgpleel...tperlervlapkvtgawllheltld 124
                 +   + +++  +   + +++lg ++v+++ +Dv++ d++ a+l+ +++ lg +++ vv  ag++  + + ++    + +++ rv++++ tg++++ +l+++
  MMETSP1325-20131115|6814_1   8 CDLPT-AEASMK---KVVQELGpERVRYAGVDVTQADDVTAALDMAQETLGdTVNCVVSCAGIAVaQRTYSRKgahSLDDFSRVMHVNTTGTFNVLRLAAE 104
                 44433.333334...4456777799**********************655428**********88677777768889******************999876 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.3   2.5e-09   4.9e-06      42     125 ..      18     104 ..       2     107 .. 0.76

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 2.5e-09
                 ---HHHHHH---.-EEEEE--TTSHHHHHHHH----TTS..---EEEE------.---TTT-...-HHHHHHHHHHHHHHHHHHHHHHCC CS
   PF08659.5  42 eallaelealga.evtvvaaDvadrdavealleeveaee.pplrGvvhaAgvlr.dallaem...taedlaavlapKvtGawnLhellad 125
                 ++ ++   +lg  +v+++ +Dv+++d+v+a+l+ ++++   +++ vv +Ag+   +++ +++   + +d+++v++  +tG+ n+ +l a+
  MMETSP1325-20131115|6814_1  18 KKVVQ---ELGPeRVRYAGVDVTQADDVTAALDMAQETLgDTVNCVVSCAGIAVaQRTYSRKgahSLDDFSRVMHVNTTGTFNVLRLAAE 104
                 33334...444339**********************99999**********8652555555411266899***********999888776 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   3.2e-08   6.3e-05      20     122 ..       2     105 ..       1     108 [] 0.91

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 3.2e-08
                 --EEEE---HH---------------.---..----TT-SGGHHHHHHHHHHH.---BSEEEEEEE---T..TTS-GGG------HHHHHHHTHHHHHHHHHHGG. CS
   PF13561.1  20 Gaevilttwvpaklkkkvqelakelp.adv..vplDvtseedvselaekvkedlggkiDilvhsianspeervekplletsrkgllaalsisayslvsllkaalpk 122
                 Ga+v++  ++ a+   +++++ +el+ ++v    +Dvt+ +dv   ++ ++e+lg+++  +v +++++  +r   +    s +++++ ++++ +   ++l+ a ++
  MMETSP1325-20131115|6814_1   2 GASVLICDLPTAE--ASMKKVVQELGpERVryAGVDVTQADDVTAALDMAQETLGDTVNCVVSCAGIAVAQRTYSRKGAHSLDDFSRVMHVNTTGTFNVLRLAAER 105
                 99********998..6899999999856687579***********************************99988888899********************999884 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.4     3e-05     0.058      46     104 ..      29     103 ..       5     106 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3e-05
  PF01073.14  46 vktvlegDvtdkekleeale........gvdvvihtaaiidvlg.........kaerdeilkvnvkGTqnvleacv 104
                 v+ +  +Dvt+++++++al+         v++v+  a+i                 + ++++vn +GT nvl  ++
  MMETSP1325-20131115|6814_1  29 VR-YAGVDVTQADDVTAALDmaqetlgdTVNCVVSCAGIAVAQRtysrkgahsLDDFSRVMHVNTTGTFNVLRLAA 103
                 33.77888888888888885222222224677777777765544555666655778899************98765 PP

>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   4.1e-05      0.08     100     125 ..      80     105 ..      11     108 .] 0.61

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.1e-05
   PF07993.7 100 feepykellrtNvlGtrevlelakkl 125
                   ++ ++++ +N++Gt +vl+la+++
  MMETSP1325-20131115|6814_1  80 SLDDFSRVMHVNTTGTFNVLRLAAER 105
                 333556799**************964 PP

>> PF03361.9  Herpes virus intermediate/early protein 2/3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   6.4e-05      0.13      33      74 ..      37      76 ..      13     106 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 6.4e-05
   PF03361.9 33 trskevkeavealrekLlkipNltvsapfqiehtkpvvhepe 74
                t++ +v  a++ ++e+L+ ++N +vs++    +++ ++++++
  MMETSP1325-20131115|6814_1 37 TQADDVTAALDMAQETLGDTVNCVVSCAGIA-VAQ-RTYSRK 76
                78999*********************98654.333.344444 PP

>> PF03681.10  Uncharacterised protein family (UPF0150)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00012      0.23      25      46 ..      36      57 ..      36      59 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00012
                -B----HHHHHHHHHHHHHHHC CS
  PF03681.10 25 vtqGeTleEAlanakEAlelhl 46
                vtq++++  Al++a+E l+ ++
  MMETSP1325-20131115|6814_1 36 VTQADDVTAALDMAQETLGDTV 57
                7****************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|6816_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-09   35.4   0.7      0.011   15.5   0.0    4.0  4  PF13516.1  Leucine Rich repeat
    1.1e-05   25.0   0.8    0.00056   19.4   0.0    2.5  2  PF13855.1  Leucine rich repeat
    3.6e-05   23.0   0.1        1.1    9.4   0.0    4.1  4  PF00560.28 Leucine Rich Repeat
    0.00089   18.7   2.1       0.28   10.7   0.1    3.3  4  PF12799.2  Leucine Rich repeats (2 copies)
     0.0018   18.0   3.4       0.87    9.9   0.1    3.9  4  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.59   1.6e+03       4      23 ..      37      56 ..      35      57 .. 0.72
   2 !   15.5   0.0   4.1e-06     0.011       1      20 [.      59      80 ..      59      87 .. 0.83
   3 !    9.2   0.1   0.00045       1.2       7      24 .]      98     115 ..      94     115 .. 0.95
   4 !    5.9   0.0    0.0055        15       3      15 ..     122     134 ..     121     135 .] 0.90

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.59
   PF13516.1  4 LtsLdLsnNqigdeGlsaLa 23
                L +L Ls + +    + a++
  MMETSP1325-20131115|6816_1 37 LDVLSLSTCRLEPSAAVAMS 56
                66788999988777766665 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 4.1e-06
   PF13516.1  1 lknLtsLdLsnNqigdeGl..s 20
                l +Lt+LdLs N +++ G+  s
  MMETSP1325-20131115|6816_1 59 LHSLTWLDLSANRLTSGGAdqS 80
                579*************999554 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.00045
   PF13516.1   7 LdLsnNqigdeGlsaLan 24 
                 L+L nN i+  G+ aLa+
  MMETSP1325-20131115|6816_1  98 LNLANNAIDPTGAAALAE 115
                 9***************95 PP

  == domain 4    score: 5.9 bits;  conditional E-value: 0.0055
   PF13516.1   3 nLtsLdLsnNqig 15 
                 +Lt+ +L++Nq++
  MMETSP1325-20131115|6816_1 122 SLTHVNLGRNQVH 134
                 79********986 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   2.1e-07   0.00056      26      61 .]      36      72 ..      21      72 .. 0.87
   2 ?    3.6   0.1     0.019        51      26      59 ..      94     131 ..      86     133 .. 0.56

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 2.1e-07
   PF13855.1 26 nLkvLdLsgnnlk.sispeafkgLpsLreLnLsgNrl 61
                +L vL+Ls ++l+ s    + kgL+sL++L+Ls Nrl
  MMETSP1325-20131115|6816_1 36 SLDVLSLSTCRLEpSAAVAMSKGLHSLTWLDLSANRL 72
                899*********548888899**************98 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.019
   PF13855.1  26 nLkvLdLsgnnl.ksispea...fkgLpsLreLnLsgN 59 
                  L  L+L +n++  +  + +   +    sL+++nL  N
  MMETSP1325-20131115|6816_1  94 GLAGLNLANNAIdPTGAAALaegLRLHASLTHVNLGRN 131
                 56667777777742332323111444457777777776 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.024        65       1      13 [.      36      48 ..      36      60 .. 0.83
   2 !    9.4   0.0   0.00039       1.1       1      14 [.      61      74 ..      61      91 .. 0.83
   3 ?    0.4   0.0      0.35   9.6e+02       5      12 ..      98     105 ..      94     117 .. 0.84
   4 ?    4.0   0.0     0.024        65       1      12 [.     122     133 ..     122     135 .] 0.89

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.024
                TESEEEETSSBCB CS
  PF00560.28  1 nLeeLdLsgNnlt 13
                +L +L+Ls ++l+
  MMETSP1325-20131115|6816_1 36 SLDVLSLSTCRLE 48
                5889*******98 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00039
                TESEEEETSSBCBC CS
  PF00560.28  1 nLeeLdLsgNnlts 14
                +L+ LdLs N+lts
  MMETSP1325-20131115|6816_1 61 SLTWLDLSANRLTS 74
                69**********97 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.35
                 EEETSSBC CS
  PF00560.28   5 LdLsgNnl 12 
                 L+L +N +
  MMETSP1325-20131115|6816_1  98 LNLANNAI 105
                 99***976 PP

  == domain 4    score: 4.0 bits;  conditional E-value: 0.024
                 TESEEEETSSBC CS
  PF00560.28   1 nLeeLdLsgNnl 12 
                 +L++ +L +N++
  MMETSP1325-20131115|6816_1 122 SLTHVNLGRNQV 133
                 69********86 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.073     2e+02      17      36 ..      26      47 ..      21      53 .. 0.76
   2 !   10.7   0.1    0.0001      0.28       3      38 ..      37      74 ..      36      86 .. 0.73
   3 !    9.2   0.1    0.0003      0.82       2      36 ..      61     105 ..      60     117 .. 0.76
   4 !    5.5   0.1    0.0045        12       6      35 ..      98     132 ..      93     134 .. 0.67

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.073
   PF12799.2 17 ppelanLp..nLktLnLsnNpi 36
                p+ l++L   +L +L+Ls +++
  MMETSP1325-20131115|6816_1 26 PALLGKLDdgSLDVLSLSTCRL 47
                5557888755699999998877 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.0001
   PF12799.2  3 LevLdLsnNnIkdlppe.l.anLpnLktLnLsnNpisd 38
                L vL+Ls ++++   ++   ++L +L+ L+Ls N++++
  MMETSP1325-20131115|6816_1 37 LDVLSLSTCRLEPSAAVaMsKGLHSLTWLDLSANRLTS 74
                5577888888874444223268**************96 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.0003
   PF12799.2   2 nLevLdLsnNnIkd.......lppel.anLpn...LktLnLsnNpi 36 
                 +L+ LdLs N++++       + + + anL++   L  LnL+nN i
  MMETSP1325-20131115|6816_1  61 SLTWLDLSANRLTSggadqsaIVA-FaANLRSatgLAGLNLANNAI 105
                 799999999999986655555555.447888777799999999988 PP

  == domain 4    score: 5.5 bits;  conditional E-value: 0.0045
   PF12799.2   6 LdLsnNnIk..dlppel.anLp...nLktLnLsnNp 35 
                 L+L+nN I      + l  +L+   +L++ nL +N+
  MMETSP1325-20131115|6816_1  98 LNLANNAIDptGAAA-LaEGLRlhaSLTHVNLGRNQ 132
                 888888886323444.52356555589999999998 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.014        39       2      14 ..      36      48 ..      35      50 .. 0.88
   2 !    9.9   0.1   0.00032      0.87       1      15 [.      60      74 ..      60      76 .. 0.92
   3 ?    0.8   0.0      0.35   9.5e+02       5      13 ..      97     105 ..      93     109 .. 0.79
   4 ?   -0.6   0.0      0.99   2.7e+03       2      14 ..     122     134 ..     121     135 .] 0.77

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.014
   PF13504.1  2 nLkeLdLsgnrLt 14
                +L +L+Ls +rL+
  MMETSP1325-20131115|6816_1 36 SLDVLSLSTCRLE 48
                8999*******96 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00032
   PF13504.1  1 pnLkeLdLsgnrLts 15
                ++L+ LdLs nrLts
  MMETSP1325-20131115|6816_1 60 HSLTWLDLSANRLTS 74
                69***********97 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.35
   PF13504.1   5 eLdLsgnrL 13 
                  L+L++n +
  MMETSP1325-20131115|6816_1  97 GLNLANNAI 105
                 599***976 PP

  == domain 4    score: -0.6 bits;  conditional E-value: 0.99
   PF13504.1   2 nLkeLdLsgnrLt 14 
                 +L+  +L +n+ +
  MMETSP1325-20131115|6816_1 122 SLTHVNLGRNQVH 134
                 5777889999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 673.98
//
Query:       MMETSP1325-20131115|6817_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 185.38
//
Query:       MMETSP1325-20131115|6818_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 546.99
//
Query:       MMETSP1325-20131115|6821_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-23   80.9   0.0      9e-23   80.7   0.0    1.1  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.0   6.6e-27     9e-23      62     172 ..       3     114 ..       1     115 [] 0.93

  Alignments for each domain:
  == domain 1    score: 80.7 bits;  conditional E-value: 6.6e-27
                 HHHHCEEEESSGCCGGG-SEEEE-S-SSHHHHHHHHHHHHCCS.TTSEEEE--SSS-HHHHCTTSS.SGGGEE--EE-SSTTT--EEEEEE-TT--HHHHHHHHHHCCC--- CS
  PF02737.13  62 evlarisvttdleeavdadlviEavvEnlelKrelfaelekvakpeailasnTSslsitelaealk.rpervvglHffnPvhlmklVEvvrgekTseetvatvvellkklgk 172
                 + +a +s++t++++++d+d        +    re+f el+k+++p+a+l++nTS+l+++++a+a + r++rvvg+Hff+P+++m+l+E vr + +s + +atv++l kkl+k
  MMETSP1325-20131115|6821_1   3 AKMALLSTSTEYAAFADVDXGGGGGLREPGAQREIFGELAKATRPDALLCTNTSTLDVDAIAAAAHgREDRVVGMHFFSPANVMPLLENVRCSTSSADSIATVMALGKKLKK 114
                 67888999999999999999999999999999*****************************9877649999**************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 626.32
//
Query:       MMETSP1325-20131115|6822_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0029   17.3   0.1     0.0031   17.1   0.1    1.1  1  PF09038.5 Tumour suppressor p53-binding protein-1 Tudor


Domain annotation for each model (and alignments):
>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   2.3e-07    0.0031       9      42 ..       5      38 ..       1      50 [. 0.82

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 2.3e-07
                -EEE-ST---BB---EEEE-----EEEE-----E CS
   PF09038.5  9 vvakwssngyfysgkitkdagegkykllfddgye 42
                + a++  +  ++sgki+++  +g y +++ddg  
  MMETSP1325-20131115|6822_1  5 IEARYRGKEKYFSGKIVRERPDGTYDIRYDDGDS 38
                56788888999********************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 322.42
//
Query:       MMETSP1325-20131115|6823_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-10   40.5   0.1      2e-10   40.2   0.0    1.1  1  PF01612.15 3'-5' exonuclease


Domain annotation for each model (and alignments):
>> PF01612.15  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.0   1.5e-14     2e-10     131     173 ..       2      43 ..       1      44 [. 0.95

  Alignments for each domain:
  == domain 1    score: 40.2 bits;  conditional E-value: 1.5e-14
                 --GCTTTTS-TT.CSS-THHHHHHHHHHHHTHHHHHHHHHHHH CS
  PF01612.15 131 eldkeeqiakwqkarplleeqleYAaeDadvllrlfkkLekel 173
                 +l+k++q+++w   rpl++ ql+YA++Da+vllrl+++++ e+
  MMETSP1325-20131115|6823_1   2 TLNKKYQCSDWT-LRPLRRGQLRYAVADALVLLRLHDAIRAEV 43 
                 689*********.**************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|6825_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 420.59
//
Query:       MMETSP1325-20131115|6826_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|6830_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-10   41.0   1.5    1.4e-10   40.5   1.1    1.2  1  PF05739.14 SNARE domain
  ------ inclusion threshold ------
      0.069   12.3   0.1      0.087   11.9   0.1    1.1  1  PF11932.3  Protein of unknown function (DUF3450)


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   1.1     2e-14   1.4e-10       1      61 [.      53     113 ..      53     115 .. 0.96

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 2e-14
                 HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14   1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalry 61 
                 e+d +l+ l +s+++L+  +l++g+e+e Q+++l+++d+++++a+s ++  ++++k + ++
  MMETSP1325-20131115|6830_1  53 EQDADLGALADSVTRLGMHALEIGNEIETQNKMLNELDEDMDDAVSGLDLVTSKTKELIKK 113
                 89****************************************************9999876 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.3e-05     0.087      39      97 ..      38      96 ..      25     107 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.3e-05
   PF11932.3 39 aqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieei 97
                   qk+i+ + +q++e  a++ +l + v  l +   ++ +++e+q++ l++l+e++++ 
  MMETSP1325-20131115|6830_1 38 DFIQKQIKLSRQQMDEQDADLGALADSVTRLGMHALEIGNEIETQNKMLNELDEDMDDA 96
                5579****************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       620  (0.0453482); expected 273.4 (0.02)
Passed bias filter:                      526  (0.0384728); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.56
# Mc/sec: 701.79
//
Query:       MMETSP1325-20131115|6829_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.3   0.0      0.021   14.5   0.0    1.3  1  PF13561.1 Enoyl-(Acyl carrier protein) reductase


Domain annotation for each model (and alignments):
>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.5e-06     0.021     146     209 ..     142     203 ..     129     209 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.5e-06
                 ----------THHHHHHHHHH----S---EEEEEE----------------------------- CS
   PF13561.1 146 yggmsvaKAaLEsltRvlAvelgrkkgiRvntisaGplktraakaiggiekmieyseenapLgk 209
                     + aKAaL   tR+ A +l+ +  i +n +  G+++      i+   +  e+s+ ++pL +
  MMETSP1325-20131115|6829_1 142 HPHTNMAKAALNMMTRTCASNLAVQDHIYMNSVDTGWINDENPLDIA--ARTAETSNFMTPLDE 203
                 556678********************************976655553..666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.32s 00:00:00.88 Elapsed: 00:00:00.90
# Mc/sec: 774.82
//
Query:       MMETSP1325-20131115|6831_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 550.65
//
Query:       MMETSP1325-20131115|6828_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-26   90.6   2.3      1e-24   86.7   1.6    2.0  1  PF10032.4 Phosphate transport (Pho88)
  ------ inclusion threshold ------
       0.16   11.9   6.0        2.7    7.9   1.6    2.4  2  PF08706.6 D5 N terminal like


Domain annotation for each model (and alignments):
>> PF10032.4  Phosphate transport (Pho88)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.7   1.6   1.5e-28     1e-24      15     178 ..      27     220 ..      21     231 .. 0.85

  Alignments for each domain:
  == domain 1    score: 86.7 bits;  conditional E-value: 1.5e-28
   PF10032.4  15 lqvskridfedPevllyirilyvlsqvilllvylylrvkikkkn...........................Dlttlkyvepasplssee...eeklekttvkeYDlkelrkllksilmgvammgfmhlymkytnPLllQsisplksllesnlvkihllgkpaegdLkRPfkeasglfeaaeaaaaevktdkkai 178
                 l+v+  + ++   +++ +r+++++  + ++lvy  +r +ik+k                             +t + ++ +  ++ s e    e  +k+t +eYD   l++ l+++ + va+++ mh +++yt PL lQ +s+l +l++  lv i++  +paegdL+RP+ +    ++a+++ a++++++k+a 
  MMETSP1325-20131115|6828_1  27 LLVTNVLKVDLGGHIQALRMCFAMTILFVVLVYENIRPRIKRKAlrdkqeaeealeawkkatsrsrkksvtKKTHVDFQPTVVAMKSPEwgeDEVETKMTHTEYDAWMLNQKLQNLALQVAITVGMHWKLRYTTPLALQVVSQLLGLFQDHLVEIYIKHTPAEGDLERPWADDDDPMAAMKKRAEQAEKEKAAG 220
                 566666666666789999***********************99999999***************99999996677766666666666655535566789***********************************************************************887777788888777777776654 PP

>> PF08706.6  D5 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.6   0.00039       2.7      44      83 ..      66     105 ..      55     132 .. 0.76
   2 ?    5.1   0.1    0.0029        20      25      80 ..     150     224 ..     129     244 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00039
   PF08706.6  44 vaeliaeeaeeaksaakalkkfakssrskkkvknvlreak 83 
                 ++++ +++++ea++a++a+kk +++sr+k++ k +    +
  MMETSP1325-20131115|6828_1  66 IKRKALRDKQEAEEALEAWKKATSRSRKKSVTKKTHVDFQ 105
                 4566667779*******************99888776664 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0029
   PF08706.6  25 dgthWeede.keaareladkvaeliaeea..................eeaksaakalkkfakssrskkkvknvlr 80 
                 +g hW+ +  ++ a ++++++++l + ++                    +++ ++a+kk a++ ++ k +++v +
  MMETSP1325-20131115|6828_1 150 VGMHWKLRYtTPLALQVVSQLLGLFQDHLveiyikhtpaegdlerpwADDDDPMAAMKKRAEQAEKEKAAGEVKD 224
                 7899**9999************999999999999999*********99999999999999999999988888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       781  (0.057124); expected 273.4 (0.02)
Passed bias filter:                      462  (0.0337917); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.56
# Mc/sec: 1215.30
//
Query:       MMETSP1325-20131115|6832_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 387.77
//
Query:       MMETSP1325-20131115|6836_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-20   73.0   0.1    1.6e-20   73.0   0.0    1.0  1  PF00176.18 SNF2 family N-terminal domain


Domain annotation for each model (and alignments):
>> PF00176.18  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.0   1.2e-24   1.6e-20      22      76 ..       2      55 ..       1      56 [] 0.96

  Alignments for each domain:
  == domain 1    score: 73.0 bits;  conditional E-value: 1.2e-24
                --B---------HHHHHHHH.HHHHHHS----EEEE--TTTHHHHHHHHHHHSTT CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00176.18 22 giLademGLGKTlqvialitaeLkemkdrrqptLvVvPssllqqWlneiekhaga 76
                giLademGLGKTlq i+l++ ++ke+++ ++p++v++P+s++ +W++e++k+ ++
  MMETSP1325-20131115|6836_1  2 GILADEMGLGKTLQSISLLA-YMKEANSVSGPHIVIAPKSTISNWMRELKKWCPS 55
                9*******************.*******************************776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:01.06
# Mc/sec: 126.60
//
Query:       MMETSP1325-20131115|6833_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-05   22.0   0.0    6.8e-05   21.4   0.0    1.2  1  PF05935.6 Arylsulfotransferase (ASST)


Domain annotation for each model (and alignments):
>> PF05935.6  Arylsulfotransferase (ASST)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0     5e-09   6.8e-05     332     458 ..      17     146 ..       6     156 .. 0.75

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 5e-09
   PF05935.6 332 egdfdwtwgqHtavlipngtiielmvFDNgdgrskeqpalaspkdnySraveYkidekn......mTveqvweygkerGaefYSsivssveylsdkgnilvdsglagld......engkklea..........eiievdaktkevvvei 458
                 +++ ++  gqH++ ++p ++  +l+ FDN+ + ++       +    Sr v+Y++          + ++  w+y ++      S++++ ++yl++ +++l ++g++++       +      a          +i+ev +++ evv+++
  MMETSP1325-20131115|6833_1  17 ADQDRYDPGQHNINVVPGSNGSKLLAFDNSAYDARG------MG-VPSRLVIYELEDRPsgadapGAASVAWSYVDGG----KSPFLGGAQYLEN-DSVLGCFGALTNPdenwdqR------AcwdpsncnqaHIVEVSKQG-EVVFSV 146
                 56777888*********99778**************......44.78********8754111122678899***9984....7************.********997763333330......13555555555777776665.566655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.61
# Mc/sec: 758.19
//
Query:       MMETSP1325-20131115|6819_1  [L=491]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-11   44.0   8.8    1.4e-11   44.0   6.1    2.7  3  PF00170.16 bZIP transcription factor
    3.1e-05   23.5  18.5      7e-05   22.4   7.8    2.9  2  PF07716.10 Basic region leucine zipper
  ------ inclusion threshold ------
      0.066   12.8   0.4       0.12   11.9   0.3    1.4  1  PF02183.13 Homeobox associated leucine zipper
       0.47   10.1  18.3       0.11   12.2   3.9    2.2  2  PF03153.8  Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.8   1.0         4   1.4e+04      13      23 ..      13      23 ..       8      25 .. 0.76
   2 !    4.5   0.6     0.009        31      13      28 ..      75      91 ..      73      94 .. 0.87
   3 !   44.0   6.1     4e-15   1.4e-11       1      51 [.     137     187 ..     137     192 .. 0.95

  Alignments for each domain:
  == domain 1    score: -4.8 bits;  conditional E-value: 4
                HHHHHHHHHHH CS
  PF00170.16 13 NReAArrsRqR 23
                N + Arr R R
  MMETSP1325-20131115|6819_1 13 NSSNARRVRSR 23
                66679999988 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.009
                HHHHHHHH.HHHHHHHH CS
  PF00170.16 13 NReAArrs.RqRKkaei 28
                NR AArrs RqR +++ 
  MMETSP1325-20131115|6819_1 75 NRMAARRSlRQRPQKRY 91
                *******9899988875 PP

  == domain 3    score: 44.0 bits;  conditional E-value: 4e-15
                 XXXXCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HH CS
  PF00170.16   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                 ++++k e rk++NR +A +sR+RK  +ieeLe  v+ L +eN aLk e+ +
  MMETSP1325-20131115|6819_1 137 DRARKLELRKIRNRQSAAASRKRKSDRIEELEAQVARLLKENAALKAEMGR 187
                 5789******************************************99876 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.4    0.0083        28      11      22 ..      74      86 ..      69      93 .. 0.76
   2 !   22.4   7.8     2e-08     7e-05       9      47 ..     145     184 ..     130     188 .. 0.92

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0083
  PF07716.10 11 rNreAArrs.Rek 22
                +Nr+AArrs R++
  MMETSP1325-20131115|6819_1 74 GNRMAARRSlRQR 86
                7*******94444 PP

  == domain 2    score: 22.4 bits;  conditional E-value: 2e-08
  PF07716.10   9 Rr.rNreAArrsRekkkakeeeleervkeLeeeNaqLrqk 47 
                 R+ rNr++A+ sR++k  + eele +v +L +eNa+L+++
  MMETSP1325-20131115|6819_1 145 RKiRNRQSAAASRKRKSDRIEELEAQVARLLKENAALKAE 184
                 666**********************************987 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   3.6e-05      0.12      15      36 ..     165     186 ..     163     189 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.6e-05
  PF02183.13  15 daLkaendsLqkEkekLraevl 36 
                 + L a+  +L+kE+++L+ae+ 
  MMETSP1325-20131115|6819_1 165 EELEAQVARLLKENAALKAEMG 186
                 6799****************86 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   3.2    0.0097        33     113     265 ..      58     198 ..      37     216 .. 0.46
   2 ?   12.2   3.9   3.2e-05      0.11      95     180 ..     290     374 ..     222     440 .. 0.67

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.0097
                 XXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXX........XXXXXXXXXXXXX............XXXXXXXXXXXXXXXXXXXXXXX..........XXXXXXXXXXX CS
   PF03153.8 113 pgqllkvevpvmvtqnsanselqqpaqqraaqqlqqslgapassqasslqqqpaplksneesqeqqqpgkeiqqqqtdgasdde.....kasvarrreaaasqeaeldellksqleqrikeleagklskalkqkkkqkksekkskieiQvDGagddss 265
                 p+++   ++ +++++n  ++     a+    q  q+++ +p++++ +s ++++ap +++e  +  q + + ++++++ ++ d       +  + r+r+ aa        + +++   ri+elea+  ++ lk++   k +  +      vDG+   +s
  MMETSP1325-20131115|6819_1  58 PSHIHRHRTRSVEDENGNRMA----ARRSLRQRPQKRYVEPSTDEDESDSEPEAPTSEREVLSSVQGTAPRVTKPKSRSSRDMDrarklELRKIRNRQSAA--------ASRKRKSDRIEELEAQ-VARLLKENAALKAEMGR----SDVDGPQSHDS 198
                 455555555555555555555....4444445555666666666666555566666664444444444444444333333333212222222222222221........2222233333333332.22222222222111111....34555554444 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 3.2e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX....XXXXXX CS
   PF03153.8  95 aaaslpagvpaestiktepgqllkvevpvmvtqnsanselqqpaqqraaqqlqqslga.passqasslqqqpaplksneesqeqqqp 180
                 + +s+ +  + ++++  ++++ + v  pvm   +  +  +q+ + q++  ++q+++g  p+s q++  qqq+++ ++++  + qqq 
  MMETSP1325-20131115|6819_1 290 SHKSIGNDSTYGKRMRAASAEATRVPRPVMAADQHHQAMQQHQQHQQPWSAAQAHYGDyPHSGQQQ--QQQQQQHHQQRYHHGQQQH 374
                 233333335566677777777778888888766555554555555555566666665423333333..2222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1232  (0.0901112); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.02u 0.34s 00:00:01.36 Elapsed: 00:00:00.57
# Mc/sec: 2028.64
//
Query:       MMETSP1325-20131115|6839_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-22   78.5   0.0    4.4e-22   78.3   0.0    1.0  1  PF00069.20 Protein kinase domain
    0.00019   20.5   0.0    0.00022   20.3   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.0   6.5e-26   4.4e-22     153     260 .]       4     107 ..       1     107 [. 0.85

  Alignments for each domain:
  == domain 1    score: 78.3 bits;  conditional E-value: 6.5e-26
                 S-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 153 eklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 e+++++ gtr Y+APE+l+ ++ yt++vD+W+lGvi + l++g+lpf+++ ++ + e+i+ +    l+++ + + + s+ +kdl+ kll+ dp +R+ta+++l+h wl
  MMETSP1325-20131115|6839_1   4 ETTQSFLGTRGYLAPEMLK-RQAYTQSVDMWALGVIAFILVCGCLPFDDDATKISDETIKFKFV--LRFPGWAQ-NLSAPAKDLLGKLLHIDPMERITAAQALEHAWL 107
                 67899**************.****************************9966655555555444..55555544.44699*************************996 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   3.2e-08   0.00022     170     252 ..      14      98 ..       2     104 .. 0.69

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 3.2e-08
                 GGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---...TTSBHHHHHHHHHHT-SSGGGS--H CS
  PF07714.12 170 kWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekp...ekcpeelyelmkqCweeepeeRptf 252
                  ++apE+lk++ +t+  D+W+ Gv+ + +++ g  p+ +  ++   e++k +  l+ p   ++ ++  ++l+ + ++ +p eR t 
  MMETSP1325-20131115|6839_1  14 GYLAPEMLKRQAYTQSVDMWALGVIAFILVC-GCLPFDDDATKISDETIKFKFVLRFPgwaQNLSAPAKDLLGKLLHIDPMERITA 98 
                 589************************8888.558887765555455555555555442224455566666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 634.33
//
Query:       MMETSP1325-20131115|6840_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 400.93
//
Query:       MMETSP1325-20131115|6837_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-05   24.0   0.6    5.1e-05   24.0   0.4    1.5  2  PF13469.1 Sulfotransferase family
  ------ inclusion threshold ------
      0.025   13.7   0.0      0.044   12.9   0.0    1.3  1  PF08270.6 M protein trans-acting positive regulator (MGA) PRD domain


Domain annotation for each model (and alignments):
>> PF13469.1  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.4   7.4e-09   5.1e-05     119     206 ..      23     131 ..       1     137 [. 0.62
   2 ?   -2.4   0.0         1   7.1e+03      78      79 ..     196     197 ..     160     224 .. 0.54

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 7.4e-09
   PF13469.1 119 kdpahl.......lfpdrfvvllRdPlavlasllrlllas.....................llrrspyalrlalrkleallrllllgla...larlwlelne..............edlpadpeatlerllal 206
                 + p ++       l+    vv++ dPl +++s++r+ +a+                     +          ++ + +          +   l +lw ++n+              edl  +pe tl++++++
  MMETSP1325-20131115|6837_1  23 YAPSSTvknvslvLP----VVMVKDPLTWMRSMCRKPYAAsfnnrgvrcpspvektktnvaW----------QPTEHY----------FyksLIHLWSVWNRaymdletprimvryEDLLFNPEVTLQKVCRC 131
                 333333455555599....******************5554566666665533333333332..........222222..........1333777777777777777779999999************99986 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 1
   PF13469.1  78 aa 79 
                 a+
  MMETSP1325-20131115|6837_1 196 AQ 197
                 11 PP

>> PF08270.6  M protein trans-acting positive regulator (MGA) PRD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   6.4e-06     0.044      17      66 ..      74     123 ..      69     129 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.4e-06
   PF08270.6  17 ketdvpvnfeefrffkiLlal..nlkRkgfkveipnsklfkqlkklliysel 66 
                 ++t+v++ ++e++f+k+L+ l  ++ R  + +++++ +++ ++++ll+  e+
  MMETSP1325-20131115|6837_1  74 TKTNVAWQPTEHYFYKSLIHLwsVWNR-AY-MDLETPRIMVRYEDLLFNPEV 123
                 5799***************99778999.88.9****9***9****9998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1087.95
//
Query:       MMETSP1325-20131115|6842_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.7   2.1       0.15   11.7   1.5    1.1  1  PF11980.3 Domain of unknown function (DUF3481)


Domain annotation for each model (and alignments):
>> PF11980.3  Domain of unknown function (DUF3481)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.5   1.1e-05      0.15      30      49 ..       7      26 ..       2      31 .] 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.1e-05
   PF11980.3 30 vavclgvvLycaryhnatkk 49
                 avcl+vvL+ a + +++ +
  MMETSP1325-20131115|6842_1  7 LAVCLAVVLCVAASSTSAVS 26
                69*********999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.52
# Mc/sec: 142.86
//
Query:       MMETSP1325-20131115|6843_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   13.9   0.0      0.051   13.2   0.0    1.3  1  PF01160.13 Vertebrate endogenous opioids neuropeptide


Domain annotation for each model (and alignments):
>> PF01160.13  Vertebrate endogenous opioids neuropeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.7e-06     0.051      22      44 ..     145     167 ..     140     171 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.7e-06
  PF01160.13  22 plvCtLECEgklssakeWetCke 44 
                 +l Ct+ECE  +   ++W++ ++
  MMETSP1325-20131115|6843_1 145 TLRCTVECENDAHMLDAWKRVQK 167
                 799***************98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 937.24
//
Query:       MMETSP1325-20131115|6845_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|6847_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      402  (0.0294032); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.63
# Mc/sec: 988.97
//
Query:       MMETSP1325-20131115|6846_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.2    8.8   7.6       0.54    9.9   1.1    2.3  2  PF00430.13 ATP synthase B/B' CF(0)


Domain annotation for each model (and alignments):
>> PF00430.13  ATP synthase B/B' CF(0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.1     4e-05      0.54      18      60 ..      23      65 ..      21      73 .. 0.87
   2 ?    2.0   0.3     0.011   1.5e+02      37      61 ..     101     125 ..      89     136 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 4e-05
  PF00430.13 18 ylgykpLgkiLdeRkekIankikeaeerlkeaaellaeaeqql 60
                ++g+k L++ +++R++ +a++++  e++++e + +   ae+ l
  MMETSP1325-20131115|6846_1 23 KVGRKRLQQEMKKRQKLVAKDVQAGEATKREKETAVHGAEDTL 65
                789********************99999988888777777665 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.011
  PF00430.13  37 nkikeaeerlkeaaellaeaeqqle 61 
                 +++++a++ lk a+++l+++ ++l+
  MMETSP1325-20131115|6846_1 101 DNLSKAKRELKIADKALKASHAKLR 125
                 5666666666666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       871  (0.0637068); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.55
# Mc/sec: 1219.96
//
Query:       MMETSP1325-20131115|6851_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|6853_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 221.88
//
Query:       MMETSP1325-20131115|6850_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-57  193.4   0.5    2.2e-57  193.1   0.4    1.1  1  PF05351.6 GMP-PDE, delta subunit


Domain annotation for each model (and alignments):
>> PF05351.6  GMP-PDE, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.1   0.4   1.6e-61   2.2e-57       3     156 ..      28     183 ..      26     184 .. 0.96

  Alignments for each domain:
  == domain 1    score: 193.1 bits;  conditional E-value: 1.6e-61
   PF05351.6   3 eaniyeidftrfkirdletgkvlfeiakpess..aedkkeedpnagrvvryqftpkllklkavgaeveFtvgdkpvknfrlierhyfrdqllksfdFefGFciPsskNtwehiyefpalseelveemiegpyetrsdsfyfvdnkLvmhnkadyaY 156
                 +an+y+i+f +f+i d +t++ +fe++++       d ++ d+++ r +ry+f  ++l+l av+ ++ F+vg+++v++fr+ierhyfr+ql+ks+dF+fGFciP s+Ntw+++y +p+l+e lv+emi++p+et+sdsfyfv++kL+mhnka+y+Y
  MMETSP1325-20131115|6850_1  28 SANTYGIEFLSFIISDYDTKNLIFEVSRDRPPpmDFDMQNFDEDSMRKIRYTFSDDVLRLPAVATQLVFSVGQQEVNEFRMIERHYFRNQLIKSYDFTFGFCIPGSTNTWDAVYAVPPLDEGLVAEMIANPHETQSDSFYFVGDKLIMHNKASYQY 183
                 689***********************98766644678999*******************************************************************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 1359.67
//
Query:       MMETSP1325-20131115|6855_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-06   26.7  29.8     0.0023   17.3   3.5    3.5  4  PF07699.8  GCC2 and GCC3
    0.00032   20.2  26.6      0.097   12.2   1.6    3.7  3  PF07562.9  Nine Cysteines Domain of family 3 GPCR
     0.0076   14.8  37.1      0.032   12.7   6.6    2.1  2  PF03302.8  Giardia variant-specific surface protein
  ------ inclusion threshold ------
      0.056   13.5  20.0       0.46   10.6   2.8    2.8  2  PF13948.1  Domain of unknown function (DUF4215)
       0.43   10.3  27.2       0.94    9.2   5.2    2.7  2  PF12773.2  Double zinc ribbon
        8.9    6.3  31.9       0.34   10.9   2.9    3.5  4  PF09463.5  Opy2 protein


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   8.3   1.7e-05     0.038       8      48 .]       3      42 ..       1      42 [. 0.92
   2 !   10.4   6.8   0.00014      0.33       1      35 [.      12      46 ..      12      71 .. 0.91
   3 !   11.0   2.1   9.7e-05      0.22       1      33 [.      45      77 ..      45      78 .. 0.90
   4 !   17.3   3.5   9.9e-07    0.0023       7      35 ..      68      95 ..      64     104 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.7e-05
   PF07699.8  8 nkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48
                ++ C+ C++GtY+ +++   C  C  g++ s  gs+  ++C
  MMETSP1325-20131115|6855_1  3 SSSCSTCGTGTYSTSYSTE-CSVCDTGKIASDRGSSACTEC 42
                568*********9998876.******************999 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00014
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgt 35
                Gty+ + + +C+ C +G   +  g+  C++C +g+
  MMETSP1325-20131115|6855_1 12 GTYSTSYSTECSVCDTGKIASDRGSSACTECDAGR 46
                9****999***********************9985 PP

  == domain 3    score: 11.0 bits;  conditional E-value: 9.7e-05
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCpp 33
                G   ++++ +C +C  G   + ++q +C++C +
  MMETSP1325-20131115|6855_1 45 GRAANANHTQCVECAAGKPAEAGSQSSCTSCAD 77
                566788999**********************87 PP

  == domain 4    score: 17.3 bits;  conditional E-value: 9.9e-07
   PF07699.8  7 gnkkCepCprGtYkneegqkkCiaCppgt 35
                +++ C+ C  G+Y+++++++ C++C +g+
  MMETSP1325-20131115|6855_1 68 SQSSCTSCADGYYSSSGSDV-CTKCDAGK 95
                5679**********999999.*****996 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   2.2   9.4e-05      0.21      27      52 ..       5      29 ..       4      31 .. 0.87
   2 !   10.4   1.8   0.00016      0.37      28      51 ..      39      61 ..      37      64 .. 0.88
   3 !   12.2   1.6   4.3e-05     0.097      27      52 ..      71      95 ..      70      97 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 9.4e-05
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeq 52
                +C  C +g++s++  +t+C  C++++
  MMETSP1325-20131115|6855_1  5 SCSTCGTGTYSTS-YSTECSVCDTGK 29
                5**********95.599*****9886 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00016
   PF07562.9 28 CvpCpegeisnetdettCkkCpee 51
                C++C++g   n  + t+C++C  +
  MMETSP1325-20131115|6855_1 39 CTECDAGRAAN-ANHTQCVECAAG 61
                **********9.6799*****876 PP

  == domain 3    score: 12.2 bits;  conditional E-value: 4.3e-05
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeq 52
                +C++C++g +s+ ++++ C+kC+ ++
  MMETSP1325-20131115|6855_1 71 SCTSCADGYYSS-SGSDVCTKCDAGK 95
                5*********99.8899*****9875 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0  13.6   0.00037      0.85     256     340 ..       6      60 ..       2      66 .. 0.51
   2 !   12.7   6.6   1.4e-05     0.032     266     303 ..      66     104 ..      62     107 .] 0.79

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00037
   PF03302.8 256 lvvcsegckectsstvcttcldGyvkssdacakcdsscetctGaattcktcatGyyksatkevactssesd.kgvtGvkdclscap 340
                   +c  g  + +                                +t+c +c tG   s  + +act++++   +    ++c++ca 
  MMETSP1325-20131115|6855_1   6 CSTCGTGTYSTSY-------------------------------STECSVCDTGKIASDRGSSACTECDAGrAANANHTQCVECAA 60 
                 2334444444444...............................455666666666666666666666665333444556666654 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 1.4e-05
   PF03302.8 266 ctsstvcttcldGyvks..sdacakcdsscetctGaattc 303
                 + s+++ct+c+dGy  s  sd+c+kcd++ +  + + t+c
  MMETSP1325-20131115|6855_1  66 AGSQSSCTSCADGYYSSsgSDVCTKCDAGKA-ANANHTQC 104
                 568899********9987899******9855.45555566 PP

>> PF13948.1  Domain of unknown function (DUF4215)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.6    0.0017       3.8       1      43 [.       6      58 ..       6      61 .. 0.80
   2 ?   10.6   2.8    0.0002      0.46       1      32 [.      72     104 ..      72     106 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0017
   PF13948.1  1 CleCqegyylnqnnqkCesiCGDgiiagd......EqCddg.....nsvsndgC 43
                C +C +g y +++++ C s C  g ia+d       +Cd g     n  ++  C
  MMETSP1325-20131115|6855_1  6 CSTCGTGTYSTSYSTEC-SVCDTGKIASDrgssacTECDAGraanaNHTQCVEC 58
                999********999999.*********444455559***998876666666655 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0002
   PF13948.1   1 CleCqegyylnqnnqkCesiCGDgiia..gdEqC 32 
                 C++C +gyy ++ +  C ++C  g  a  +  qC
  MMETSP1325-20131115|6855_1  72 CTSCADGYYSSSGSDVC-TKCDAGKAAnaNHTQC 104
                 9**********999999.***9998886677887 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.2   0.00041      0.94      13      49 ..       4      42 ..       2      43 .. 0.85
   2 ?    8.2   6.4   0.00085       1.9       7      49 ..      47      91 ..      44      92 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00041
   PF12773.2 13 rfCpqCgaklkeataeevlCpsCge...svspkarfCpnC 49
                  C++Cg+    +t  +  C+ C++    ++ +++ C++C
  MMETSP1325-20131115|6855_1  4 SSCSTCGTGTY-STSYSTECSVCDTgkiASDRGSSACTEC 42
                57******999.7777888****99887799999999999 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00085
   PF12773.2  7 enpsgarfCpqCgaklkeataeevlCpsCge..svspkarfCpnC 49
                + +++   C +C a  +++  ++ +C sC     +s ++ +C++C
  MMETSP1325-20131115|6855_1 47 AANANHTQCVECAAGKPAEAGSQSSCTSCADgyYSSSGSDVCTKC 91
                56788899*********8899999*****77536*********** PP

>> PF09463.5  Opy2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   4.5     0.038        86       9      32 ..       4      27 ..       2      29 .. 0.90
   2 ?    7.1   1.7    0.0022       5.1       8      32 ..      36      60 ..      32      62 .. 0.88
   3 ?   10.9   2.9   0.00015      0.34       7      31 ..      69      92 ..      65      95 .. 0.89
   4 ?   -3.8   0.0       5.7   1.3e+04      33      35 .]     102     104 ..     100     105 .. 0.52

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.038
   PF09463.5  9 psCPsCasgetCvltsqtCdeCat 32
                 sC +C  g++ +  s  C+ C t
  MMETSP1325-20131115|6855_1  4 SSCSTCGTGTYSTSYSTECSVCDT 27
                49********************86 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0022
   PF09463.5  8 apsCPsCasgetCvltsqtCdeCat 32
                + +C +C+ g +    +  C eCa 
  MMETSP1325-20131115|6855_1 36 SSACTECDAGRAANANHTQCVECAA 60
                458********************95 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 0.00015
   PF09463.5  7 kapsCPsCasgetCvltsqtCdeCa 31
                ++ sC sCa+g++ +  s  C++C 
  MMETSP1325-20131115|6855_1 69 QS-SCTSCADGYYSSSGSDVCTKCD 92
                45.9********************6 PP

  == domain 4    score: -3.8 bits;  conditional E-value: 5.7
   PF09463.5  33 tyC 35 
                 t+C
  MMETSP1325-20131115|6855_1 102 TQC 104
                 444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       539  (0.0394236); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.54
# Mc/sec: 474.83
//
Query:       MMETSP1325-20131115|6852_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-19   68.0   0.0    6.2e-19   67.4   0.0    1.3  1  PF01521.15 Iron-sulphur cluster biosynthesis
  ------ inclusion threshold ------
       0.29   10.0   5.3       0.45    9.3   0.0    2.5  2  PF01993.13 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase


Domain annotation for each model (and alignments):
>> PF01521.15  Iron-sulphur cluster biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.0   9.1e-23   6.2e-19       1      91 []     150     242 ..     150     242 .. 0.98

  Alignments for each domain:
  == domain 1    score: 67.4 bits;  conditional E-value: 9.1e-23
  PF01521.15   1 itlteaAakklkelleleeeekalRlgVkygGcsGfsyglkle..neaeeddevleqdgvtvvvdekslpylegveldfveelegsgfkfsnp 91 
                 +t+++aAa+k+  ++e +++  ++RlgVk  Gc+G+sy l++   ne +++d+ +  +gv+v++++ ++ ++ g+e+d++e+ ++++f+f+np
  MMETSP1325-20131115|6852_1 150 LTISQAAAEKVLGMVEAKDGAVGVRLGVKRRGCNGMSYVLNYAmeNELDAKDIKVADKGVEVYIEPGAMFHIVGTEMDWEETALSAEFTFHNP 242
                 699**************************************9999***********************************************8 PP

>> PF01993.13  methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   1.8     0.025   1.7e+02      62     105 ..     122     165 ..      91     174 .. 0.65
   2 ?    9.3   0.0   6.6e-05      0.45       2      54 ..     173     225 ..     170     245 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.025
                 EEEE----TT----HHH..HHHHHTSSS-EEE-------TTHHHHH CS
  PF01993.13  62 fviyispnpaapGpkka..rellsdsevpaviigdapglkvkdele 105
                   +   p pa p pkk   r +l  +e+  + i++a + kv   +e
  MMETSP1325-20131115|6852_1 122 KAVDPEPTPAPPRPKKGnrRRIL--EEKAPLTISQAAAEKVLGMVE 165
                 34455688999999986324555..566667889999999876555 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 6.6e-05
                 EEEEEEE------TTTTTGGGSTTS--SSEEEEEE-ETT--SHHHHHHHHHHH CS
  PF01993.13   2 vkigiikcGniGtsllldlllderadredievrvvgsgakmdpesveevvkei 54 
                 v++g+ + G  G+s +l++++++  d +di+v   g  + ++p ++ ++v + 
  MMETSP1325-20131115|6852_1 173 VRLGVKRRGCNGMSYVLNYAMENELDAKDIKVADKGVEVYIEPGAMFHIVGTE 225
                 67888999**********************************99887776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       675  (0.049371); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.51
# Mc/sec: 1202.88
//
Query:       MMETSP1325-20131115|6854_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1281.13
//
Query:       MMETSP1325-20131115|6856_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 324.21
//
Query:       MMETSP1325-20131115|6859_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 393.00
//
Query:       MMETSP1325-20131115|6858_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 916.50
//
Query:       MMETSP1325-20131115|6861_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        72  (0.00526624); expected 273.4 (0.02)
Passed bias filter:                       66  (0.00482738); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|6860_1  [L=378]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-09   37.1  14.5    6.7e-08   31.9   3.7    2.7  2  PF13414.1  TPR repeat
  ------ inclusion threshold ------
      0.041   13.3   0.1      0.041   13.3   0.1    1.8  2  PF04072.9  Leucine carboxyl methyltransferase
       0.18   11.5   6.6        2.2    8.1   0.0    3.2  3  PF13176.1  Tetratricopeptide repeat
       0.18   11.0   6.8       0.31   10.2   4.7    1.3  1  PF07423.6  Protein of unknown function (DUF1510)
       0.37   10.1   5.6       0.16   11.3   1.4    1.9  2  PF03064.11 HSV U79 / HCMV P34
        1.5    8.5   8.8        2.4    7.8   6.1    1.3  1  PF06459.7  Ryanodine Receptor TM 4-6
        2.2    7.3   6.9          3    6.8   4.8    1.2  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)
        9.9    4.5   8.1         12    4.2   5.6    1.1  1  PF03430.8  Trans-activating transcriptional regulator


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   3.7   3.9e-11   6.7e-08       4      68 ..      99     171 ..      96     172 .. 0.91
   2 !   11.3   4.4    0.0001      0.18      17      59 ..     158     199 ..     156     223 .. 0.88

  Alignments for each domain:
  == domain 1    score: 31.9 bits;  conditional E-value: 3.9e-11
   PF13414.1   4 ealkelGnalfkegdydeAieayekAleldpnnae.........lyynlAlaylklgkdyeeAledyekAleld 68 
                 ++lk+ Gna fkegd +eA+++y  Al+ +++ a+         l++n A+++l+lg   e A+ +++ Ale +
  MMETSP1325-20131115|6860_1  99 LSLKADGNAKFKEGDCQEALKLYGAALQTWSSVANnddletasaLHANSAACLLQLG-GQENAALALKAALEAS 171
                 7899**************************999999999999***************.5699999999999875 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.0001
   PF13414.1  17 gdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAle 59 
                  + + A++a  +A +l p +a++y + A+a++ lg+  e+A+e
  MMETSP1325-20131115|6860_1 158 ENAALALKAALEASKLVPTYAKAYHRAAAALEALGE-VEAAAE 199
                 566779999999999********************6.577765 PP

>> PF04072.9  Leucine carboxyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   2.4e-05     0.041       5      37 ..      60      92 ..      58     127 .. 0.78
   2 ?   -2.7   1.0       1.9   3.3e+03      17      42 ..     206     239 ..     190     260 .. 0.44

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.4e-05
                HHHHHHHHHHHHHHH--SCCCHCCHHHHCCCHB CS
   PF04072.9  5 aaaralesrrpdplldDplaarlvraidldfsk 37
                a  +a+es++p p+++Dp a++l+++++ + s 
  MMETSP1325-20131115|6860_1 60 AILNAIESKQPVPIFTDPAAQKLLDQKAAAVSA 92
                6789**********************9433333 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 1.9
                 HHH--SCCCHCCHHH.........HCCCHBT.HCCC CS
   PF04072.9  17 plldDplaarlvrai.........dldfskf.erek 42 
                 +l+  + a++ + ++         d   +k+ ++ek
  MMETSP1325-20131115|6860_1 206 ALMAEEKAKKDAARAalaekraarD--AKKReKEEK 239
                 4444444444333332322224221..222112222 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0    0.0013       2.2       7      31 ..     106     130 ..     105     136 .. 0.82
   2 ?   -1.2   0.1       1.3   2.1e+03       6      27 ..     148     169 ..     143     175 .. 0.71
   3 ?    4.6   0.9     0.017        29       1      25 [.     180     206 ..     180     221 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0013
   PF13176.1   7 rlysrlgdyekAielyeraLaltkd 31 
                 ++ ++ gd ++A++ly +aL+ +++
  MMETSP1325-20131115|6860_1 106 NAKFKEGDCQEALKLYGAALQTWSS 130
                 667899************8877765 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 1.3
   PF13176.1   6 arlysrlgdyekAielyeraLa 27 
                 a +  +lg  e+A+ ++++aL+
  MMETSP1325-20131115|6860_1 148 AACLLQLGGQENAALALKAALE 169
                 5566677778999999999663 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.017
   PF13176.1   1 allnLarlysrlgdyekAielyer..a 25 
                 a+++ a + ++lg+ e A+e  ++  a
  MMETSP1325-20131115|6860_1 180 AYHRAAAALEALGEVEAAAESRKQgeA 206
                 789999**************9999554 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   4.7   0.00018      0.31      48     122 ..     195     268 ..     166     276 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00018
   PF07423.6  48 eeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkeeeseedeketeekeesnve 122
                 e ++e+ ++ e+  +ee+ +++   a+ ++k   ++++kk+e++e+e+  + +++e  +++++k t+++  s+++
  MMETSP1325-20131115|6860_1 195 EAAAESRKQGEALMAEEKAKKDAARAALAEKRA-ARDAKKREKEEKEAAAKAKRDEAAAKAKAKATSGSAPSTIK 268
                 444555555555555555555555555555555.56666666666666556666666999999999998888776 PP

>> PF03064.11  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.36   6.2e+02     137     169 ..      78     111 ..      71     117 .. 0.70
   2 ?   11.3   1.4   9.1e-05      0.16     114     216 ..     165     265 ..     147     274 .. 0.70

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.36
  PF03064.11 137 eikdvgdvklaev.aekvcralsrkksdderkkk 169
                  ++++ d+k+a+v a+k  r+ls+k +++++ k+
  MMETSP1325-20131115|6860_1  78 AAQKLLDQKAAAVsAAKKERVLSLKADGNAKFKE 111
                 5666778888776256777899999998887665 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 9.1e-05
  PF03064.11 114 TlvaengkLqvtyvtlskkaheaeikdvgdvklaevaekvcralsrkksdderkkksakqkekRrdedskkkkedrkkkqeekrtsdedkrsgkgdesGsggq 216
                     e +kL  ty + ++ a    ++ +g+v +a+   k+ +al   ++  +++   a   ekR  +d+kk++ ++k    ++++++   + + +  sGs  +
  MMETSP1325-20131115|6860_1 165 KAALEASKLVPTYAKAYHRAAA-ALEALGEVEAAAESRKQGEALM-AEEKAKKDAARAALAEKRAARDAKKREKEEKEAAAKAKRDEAAAKAKAKATSGSAPS 265
                 4556778888888887776654.4666888888888777775543.333344444445567899999998888888888889999888888888888888665 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   6.1    0.0014       2.4      59     135 ..     181     257 ..     133     271 .. 0.53

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0014
   PF06459.7  59 rhdaepgLgdvsevepeepptpeeaaaekkelkeeeeepkseaekadledgekeekaeeeseekpeeakaakkkaek 135
                 +h a ++L  ++eve+  ++ ++++a   +e++++ + +   aek    d +k ek+e+e  +k++ ++aa k+++k
  MMETSP1325-20131115|6860_1 181 YHRAAAALEALGEVEAAAESRKQGEALMAEEKAKKDAARAALAEKRAARDAKKREKEEKEAAAKAKRDEAAAKAKAK 257
                 48888888888888777666666655544433333333333333333333333222222222222222222222111 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   4.8    0.0018         3     247     299 ..     199     262 ..     133     264 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0018
                 X...........XXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX----- CS
   PF09468.5 247 a...........sdlskkreaeedaeaaesraekkrkkeeeekkkkakeskgvkalkkvnasGm 299
                 +           ++ +k+++++++ae+   r  kkr+kee+e + kak   +  + k +++sG 
  MMETSP1325-20131115|6860_1 199 EsrkqgealmaeEKAKKDAARAALAEKRAARDAKKREKEEKEAAAKAKRDEAAAKAKAKATSGS 262
                 1334444455556677777777777777777788888888888888886666666666688885 PP

>> PF03430.8  Trans-activating transcriptional regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   5.6    0.0071        12      59     174 ..     138     253 ..      87     268 .. 0.65

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0071
   PF03430.8  59 ktvenalasdalvellldkskkleeavsqdyeresvvspvvespqalearaeslaeslselkavtvskrkgs....eldsdvdesdsskGkkk.vkKpKkRekykkeviqskeklskeeky 174
                 +t + + a+ a   l+l  +++ + a + ++e  ++v     + +a ++  +   e+l e++a+ +s+++g     e + + d + +   +k+  + +KkRek +ke + +  k+++   +
  MMETSP1325-20131115|6860_1 138 ETASALHANSAACLLQLGGQENAALALKAALEASKLVP---TYAKAYHRA-AAALEALGEVEAAAESRKQGEalmaEEKAKKDAARAALAEKRaARDAKKREKEEKEAAAKA-KRDEAAAK 253
                 34444444444444444444444555555555444444...455555554.46677888887777777777667666666667777666665515679********998876.55544433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1296  (0.0947923); expected 273.4 (0.02)
Passed bias filter:                      501  (0.0366442); expected 273.4 (0.02)
Passed Vit filter:                        88  (0.00643651); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.88u 0.37s 00:00:01.25 Elapsed: 00:00:00.51
# Mc/sec: 1776.12
//
Query:       MMETSP1325-20131115|6865_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 760.58
//
Query:       MMETSP1325-20131115|6864_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-48  163.1   0.1    8.9e-48  162.2   0.1    1.4  1  PF00574.18 Clp protease


Domain annotation for each model (and alignments):
>> PF00574.18  Clp protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.2   0.1   6.5e-52   8.9e-48      13     181 ..       2     179 ..       1     180 [. 0.94

  Alignments for each domain:
  == domain 1    score: 162.2 bits;  conditional E-value: 6.5e-52
  PF00574.18  13 llkeriiflgeevddevankivaqLlfLesedsdkdislyinSpG.........GsvtaglaIydtlkfikpdvsticlGlaaSmaslilaaGekgkRialpnarimihqPlggaqgqasdieieaeelekikerlneiyaertgqseekiekdldrdtflsaeeAkeyGliDevles 181
                 ll++ri+ +g ++   v++ i+a+Ll+L+ e+++k++++yinS+G         G  t+ +aI d++k+ikp+v+ticlG+a  +a+++l+ G+kg+R+alpna im+hqP ++a+gqasdi+i+a+e++  +++   ++a+++++++e + +d  r ++ls++eA++yG+iD+vl+s
  MMETSP1325-20131115|6864_1   2 LLHNRIVYIGMPLVPAVTELIIAELLYLNYESDSKPVYMYINSSGtmnaqgqsvGFETEAFAIADCMKYIKPPVHTICLGQAYGAAAMLLSQGAKGHRFALPNASIMLHQPRSQARGQASDIAIKAREVLANRRVTCGLIAQACDKDIEAVMADAGRTKYLSPDEAVDYGMIDKVLTS 179
                 8899****************************************94444444444457889******************************************************************************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 1139.49
//
Query:       MMETSP1325-20131115|6870_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|6871_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-12   45.8   0.0    8.2e-12   44.9   0.0    1.5  1  PF07258.9 HCaRG protein
  ------ inclusion threshold ------
       0.11   12.1   0.1       0.19   11.3   0.1    1.4  1  PF14409.1 Ribosomally synthesized peptide in Herpetosiphon


Domain annotation for each model (and alignments):
>> PF07258.9  HCaRG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.0   1.2e-15   8.2e-12      69     178 .]      20     136 .]      18     136 .] 0.81

  Alignments for each domain:
  == domain 1    score: 44.9 bits;  conditional E-value: 1.2e-15
   PF07258.9  69 qlsaeL.eqlklpkehaealskvykenkkklr......eslaktslrlphLedlsWRvdvklssselqevnsPvilleLklqngggssetvtfelseeklqellkelkeaqkeleal 178
                 ql++ L   + l+   +e++++++ +   +        +++ak+ +++++L +++W+v+v ++ss+++ +  P++ l + +++ +g++et ++el+  ++q++ k l ++ + le+l
  MMETSP1325-20131115|6871_1  20 QLQEALqYHTELSAAAIECVVRCWTATEGARVasapdgAAAAKQAFTIGQLVGVEWKVGVSVASSQCENLLAPFVSLMFRVATVNGDVETRNIELTYTEFQDMNKTLVDVAALLETL 136
                 56666655666777777777777766544443111111457899999****************************************************************999986 PP

>> PF14409.1  Ribosomally synthesized peptide in Herpetosiphon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   2.8e-05      0.19      25      51 ..      32      57 ..      24      63 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.8e-05
   PF14409.1 25 eaaeindvVgclkaidGsysrtgCdds 51
                 aa i+ vV c+ a  G   + + +d+
  MMETSP1325-20131115|6871_1 32 SAAAIECVVRCWTATEG-ARVASAPDG 57
                6899*************.777778887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|6866_1  [L=374]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-27   93.7   0.0    1.6e-26   92.8   0.0    1.4  1  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   0.0   1.2e-30   1.6e-26      14     242 ..      66     330 ..      58     336 .. 0.71

  Alignments for each domain:
  == domain 1    score: 92.8 bits;  conditional E-value: 1.2e-30
  PF01504.13  14 sggksgslfylskddrFliKtlkkselkvllkilpkYfehvkenpn......tllskiyglyrvkkqgsekkiyfvvmenlf.............yserkihekyDLKGstvgRevk......ekekekk....................aavlkDldlleekellnlekekkkllleqlkkDtefLeslnimDYSLLlgih.....ekeeeeeeeekkeeeekekgiesed.ekevlylgiIDiLqeYtlkKkleslvksllklkgkdisvvsPkeYak 242
                  ggk g+l+ +     +++K+++++++++ll+i++ Y +h+  + +      t+l+k++  +      + ++ +f+ m n+              +s+r  + +yDLKG+  +++ +      +     +                    ++ +    l+  +  ++++ ++k+++   +k+D+ fL++l++mDYSL++++      + + e+  ++++ + ++   +++ d + +vl+lgiID+Lq++t  K++++++k l +++     +++P  Ya+
  MMETSP1325-20131115|6866_1  66 GGGKGGNLLAIHG--DYVVKEMNNTDHNTLLQIAKLYADHILMEDRhgntygTMLCKVLCHFHD---PR-TNKNFMAMDNVTpnpvppgasrdtrPSKRASRSTYDLKGCADDKTLTwdntkvN-----EvhkrvwnasmwcgqclwsqeRKKYYQGKLNAANVDFHVTADQKEKIEMWIKRDCTFLSDLGLMDYSLMVSCLvlerdDPDAEAWINASQGSADEVPFVSIYDgKVQVLHLGIIDFLQDWTCTKNIAMCIKFL-ECN---KATIPPGWYAA 330
                 5666666666655..5************************988777788999999999655544...23.5689********55555444444444445555********99977765432220.....133445666666665555544444566666666799************************************43322222222222222233344444444448889************************99.665...45677777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.34s 00:00:01.01 Elapsed: 00:00:00.52
# Mc/sec: 1723.53
//
Query:       MMETSP1325-20131115|6869_1  [L=449]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-09   37.2   0.0    2.8e-09   36.6   0.0    1.2  1  PF00689.16 Cation transporting ATPase, C-terminus


Domain annotation for each model (and alignments):
>> PF00689.16  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.0     2e-13   2.8e-09       9      80 ..       4      81 ..       2     111 .. 0.88

  Alignments for each domain:
  == domain 1    score: 36.6 bits;  conditional E-value: 2e-13
  PF00689.16  9 iLwinLvtDslpalaLaleppe....kdimkrkPr.kkkeplfskkmllri.liqgllqalvtllafflgllgfgise 80
                +L+i+ vt ++pa+++a+e++e     +im r Pr    ++l+++km++++ +++g++qa ++++a++++++ +g+  
  MMETSP1325-20131115|6869_1  4 VLLIDCVTNVVPAIGMAFEKKEvgarGGIMARDPRnTFLDRLLTGKMFFYSfFQLGMIQACAGFYAYLVVMNDYGYPP 81
                79*******************9888889*******6678********************************9887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.57
# Mc/sec: 1855.11
//
Query:       MMETSP1325-20131115|6876_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 211.99
//
Query:       MMETSP1325-20131115|6874_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 967.76
//
Query:       MMETSP1325-20131115|6873_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-26   93.1   0.1    1.6e-26   92.6   0.1    1.3  1  PF00650.15 CRAL/TRIO domain
  ------ inclusion threshold ------
       0.11   12.0   0.0       0.36   10.3   0.0    1.8  2  PF08040.6  MNLL subunit


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.6   0.1   2.3e-30   1.6e-26       2     159 .]     110     280 ..     109     280 .. 0.88

  Alignments for each domain:
  == domain 1    score: 92.6 bits;  conditional E-value: 2.3e-30
  PF00650.15   2 eileggkvgihgrDkngrpvlylrlgrfdpk..klsee.....elvrllllvlerllkllee........dgqiegvtvviDmkglslskmlwkpisllkkilkilqdnyPerlkkilivnaPklfkvafklvkpfldektreKikfvspsntpatlekyidpeqlpkelGGt 159
                  i++++  ++h+rDk+gr+v+y  l++   +  +l+ +     ++v+++ +++e++ + l++        + + ++++ ++D++ l+l +++ + +s   + +  l +nyPer+ kil++n+P  f +++k+v p+ld ++re+i++    + +a++++ id e++p+ +GGt
  MMETSP1325-20131115|6873_1 110 LIKQQFTHFYHKRDKQGRMVYYEALNSPRNAfkELKTHgigvdDVVQHMTFMTEFTHRVLNDdydevgkePLKTGQLIKIVDIQSLGLGDVGGD-VSQYFNKIGALGKNYPERIDKILVINVPAGFGMIWKIVAPMLDRNVRERISIFRA-DYKAAMQELIDIENIPAIYGGT 280
                 57899999***************99988777773433345566***********999855556777888899********************43.7777788899*******************************************66.6669*****************7 PP

>> PF08040.6  MNLL subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.56   3.8e+03      36      52 ..      82      97 ..      75      99 .. 0.75
   2 ?   10.3   0.0   5.3e-05      0.36      11      40 ..     224     258 ..     220     266 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.56
   PF08040.6 36 taFRdKSaLykrrelkp 52
                 +F +K + +   e +p
  MMETSP1325-20131115|6873_1 82 NMFWNKTIEFRT-ETQP 97
                689999999985.7666 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 5.3e-05
   PF08040.6  11 qwvwilvPlGFvvGk.....yLDrkederltaFRd 40 
                 + + i vP GF++ +     +LDr+  er+++FR 
  MMETSP1325-20131115|6873_1 224 KILVINVPAGFGMIWkivapMLDRNVRERISIFRA 258
                 56778899999755444444**************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       495  (0.0362054); expected 273.4 (0.02)
Passed bias filter:                      454  (0.0332066); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.39s 00:00:01.05 Elapsed: 00:00:00.54
# Mc/sec: 1428.94
//
Query:       MMETSP1325-20131115|6877_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0024   16.1   0.1     0.0029   15.9   0.1    1.1  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   2.1e-07    0.0029     394     418 .]       2      26 ..       1      26 [. 0.96

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 2.1e-07
                 ---EEEHHHHHHHHHTSTTEEEEEE CS
  PF00501.23 394 rGeniepgeiEsallehpgvaeaaV 418
                 +Ge+++ ++iE++++++p +a+a+V
  MMETSP1325-20131115|6877_1   2 QGEYVAAEKIENVIAQSPLIAQAFV 26 
                 6**********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|6879_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.075   12.6   0.6        1.4    8.5   0.1    2.3  2  PF09051.5 Stannin cytoplasmic


Domain annotation for each model (and alignments):
>> PF09051.5  Stannin cytoplasmic
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.012   1.7e+02      11      20 ..      11      21 ..      11      23 .. 0.79
   2 ?    8.5   0.1    0.0001       1.4       5      15 ..      45      55 ..      44      58 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.012
                HHHHHHH.HS- CS
   PF09051.5 11 rVEkKtK.LTP 20
                +VE+ +K LT+
  MMETSP1325-20131115|6879_1 11 HVEHTAKgLTA 21
                8*****94476 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0001
                HHH---HHHHH CS
   PF09051.5  5 YSAkGPrVEkK 15
                YS kGPrV  K
  MMETSP1325-20131115|6879_1 45 YSHKGPRVSSK 55
                ********777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|6881_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-09   37.9   0.1    2.3e-09   37.4   0.1    1.2  1  PF05721.8 Phytanoyl-CoA dioxygenase (PhyH)


Domain annotation for each model (and alignments):
>> PF05721.8  Phytanoyl-CoA dioxygenase (PhyH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.1   1.7e-13   2.3e-09     136     211 .]       2      88 ..       1      88 [. 0.86

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 1.7e-13
                 S----EEEE---------.................................-EEE----..............----.........- CS
   PF05721.8 136 eenGclrfiPGSHkweegplrrrlpeddteae..........ddeakkedeeeavpvevkaGdavlfhgrllHgsgaNrsdk.sRra 211
                 ee G   + PGSH+w++   +  + e  ++a           ++ a  e+    v ++v  G++v++h +++Hgs++N+s+  +Rra
  MMETSP1325-20131115|6881_1   2 EETGVVEYAPGSHRWPRASATGAAVESTFHASddylsalreaAQLAGVEPCPAPVRLPVPSGSVVFHHQDVWHGSARNSSATrPRRA 88 
                 6888999********77766666666666666******9998888888888999**************************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 687.84
//
Query:       MMETSP1325-20131115|6882_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 388.50
//
Query:       MMETSP1325-20131115|6883_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.46s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 392.13
//
Query:       MMETSP1325-20131115|6884_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.32s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 649.01
//
Query:       MMETSP1325-20131115|6887_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0019   17.8   4.7     0.0021   17.7   3.2    1.2  1  PF10914.3 Protein of unknown function (DUF2781)


Domain annotation for each model (and alignments):
>> PF10914.3  Protein of unknown function (DUF2781)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   3.2   1.6e-07    0.0021      40      98 ..       6      63 ..       3     104 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.6e-07
   PF10914.3 40 YiqqyeDyLldeppawfrlfvllelffqlPlflyavyallkkgckwlpllllvy.glava 98
                ++++y++ +l+  p w++l +   +   lPl+++ ++a+l++ ++ +++l++v+ g+++ 
  MMETSP1325-20131115|6887_1  6 FATKYNPLFLA-RPYWLKLATCFSAYGFLPLYIILLFAFLVG-WNGVRPLAFVFaGVKLY 63
                6899******9.******************************.55555555555055544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 539.18
//
Query:       MMETSP1325-20131115|6888_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.058   12.2   6.5       0.07   11.9   4.5    1.2  1  PF04004.8 Leo1-like protein
        2.1    7.2  12.5        2.4    7.0   8.7    1.0  1  PF09073.5 BUD22


Domain annotation for each model (and alignments):
>> PF04004.8  Leo1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   4.5     1e-05      0.07     224     328 ..       2      98 ..       1     125 [. 0.66

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1e-05
   PF04004.8 224 kskkvkltivgkdPelekeerekkeeeklrarrrrqkreklkkkkPdeddedyrsnegededeaqrerkiknrpgkeseseseeskaqttysededeesdeetrk 328
                 k++ ++++ + +dPe+ k  re++  ++ ra+ +++ r + +   P + +++y  ++g  +  a+  + ik +       ese +  ++   +++de++d+  ++
  MMETSP1325-20131115|6888_1   2 KTSRIREVATVNDPERLKADRERAAMKRQRAE-QSKGRGRSRASRP-GMKSNYLEDDGRYDVVAN-VGDIKSK-----ARESEYDSGDSFIASGSDEDADDFGSQ 98 
                 78889999999*************99999987.5788999999999.888888888876655443.3333333.....333333333333333333333333333 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   8.7   0.00035       2.4     136     252 ..       5     124 ..       2     128 .] 0.74

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00035
   PF09073.5 136 slkkllgiekkaekekkkkkkkkkkkkkedesedkdeeessesedssddeeseed...dsdsdeeeesdsedlsqydallvsssdeesgeeqdesddeeesesesesdeedeedsdsrsv 252
                 +++ ++ ++++ + +++ +++  k+++ e+++   ++++s  + +s+  e++++     +  d ++++ + +++  d  ++s+sde+ ++  +++ +  + +++ ++++  ++ s+ +s 
  MMETSP1325-20131115|6888_1   5 RIREVATVNDPERLKADRERAAMKRQRAEQSKGRGRSRASRPGMKSNYLEDDGRYdvvANVGDIKSKARESEYDSGDSFIASGSDEDADDFGSQQRSPGKAADSDSDSDGLSRESEYDSG 124
                 67888888899999999999999999999998888888888888888888887776775666777777777999**************99885555555555555555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.64
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|6885_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-27   95.6   0.0    1.8e-27   94.9   0.0    1.4  1  PF01588.15 Putative tRNA binding domain
  ------ inclusion threshold ------
       0.02   14.3   0.0      0.034   13.5   0.0    1.3  1  PF09205.5  Domain of unknown function (DUF1955)


Domain annotation for each model (and alignments):
>> PF01588.15  Putative tRNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.9   0.0   2.6e-31   1.8e-27       1      95 []     104     200 ..     104     200 .. 0.98

  Alignments for each domain:
  == domain 1    score: 94.9 bits;  conditional E-value: 2.6e-31
                 EEEEEEEEEEEETTSTTEEEEEEE----C..EEEEE-ETTTS-HCCCTT-EEEEETSSESEE----EE-SEB-EEETE-S--EEEEEESSS-----B CS
  PF01588.15   1 lrvGkvleaekhpnadkLlvlkvdvGeee..rqivsgaknvyapeelvaklvvvvanlkpkklrGveSeGMilsaeeleeeevellelpeeveaGek 95 
                 +rvG+ +e+ +hp+++kL+++k+dvG+++  r+++sg++ + + ee+ ++ v vv+nlkp+k+ G++S+GM+l+a++++++ ve++e+pe+v +G++
  MMETSP1325-20131115|6885_1 104 IRVGELVEVWNHPESNKLYCEKIDVGDAAgpREVCSGLAPYFSLEEMKNQRVLVVCNLKPAKMAGFVSNGMVLCAKSEDGSRVEFMEPPEGVAVGTR 200
                 79***************************************************************************99***************985 PP

>> PF09205.5  Domain of unknown function (DUF1955)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     5e-06     0.034      26      93 ..     107     174 ..      99     189 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5e-06
                 HHHHHHS-HHHHTHHHHHHHHH--HHHHHHHHHH----S-GGG-S-THHHHH---TT----HHHHHHH CS
   PF09205.5  26 kklvkssnkkeanWvicniidtidcdavvkvldkiGkifdlskcqnlkrvvecgvklnklseyvdlal 93 
                  +lv+  n+ e+n + c+ id  d +   +v   +  +f l++ +n + +v c +k  k++ +v   +
  MMETSP1325-20131115|6885_1 107 GELVEVWNHPESNKLYCEKIDVGDAAGPREVCSGLAPYFSLEEMKNQRVLVVCNLKPAKMAGFVSNGM 174
                 6788889999*****************************************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.60
# Mc/sec: 1054.40
//
Query:       MMETSP1325-20131115|6878_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0041   17.3   0.0      0.011   15.9   0.0    1.9  1  PF13529.1 Peptidase_C39 like family


Domain annotation for each model (and alignments):
>> PF13529.1  Peptidase_C39 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   8.2e-07     0.011      12     144 .]      43     191 ..      34     191 .. 0.58

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 8.2e-07
   PF13529.1  12 lpngCeptSlamvlsyl..gksvtkneladeigttp.............tgnpnegfvgnptdesgygvyaepiaklaekygl..........katdltgtsleevkkeidagrpvvvsvtitfkpleggkikftsngHavvltGydd.....ng..evyvnDPa 144
                  pngC++  +  + +++  + + t  ++   ++++                         +  ++ yg +a+ ++++ae+ +           +++      +++v+ +id g  v++ v+     l  ++++ + n+H+++++Gy++     ++   ++v DP+
  MMETSP1325-20131115|6878_1  43 RPNGCWIPPVVSIARFYelDSEATIASVLASYPSKDdedafevlerlfgV----------WAPSNVYGNDASCFETTAEHGVPwcgptsieeySTQRAHPDWFADVRATIDGGDLVLLLVE----RL--EGLRDKGNTHYLLVVGYQEvarrcGNvcSLFVKDPM 191
                 67777777777777777444444444444444444466654444444331..........2233333333333333333333333333333322244456667*****************5....44..346999************977665336778888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.52
# Mc/sec: 1327.21
//
Query:       MMETSP1325-20131115|6893_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 650.44
//
Query:       MMETSP1325-20131115|6894_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 751.58
//
Query:       MMETSP1325-20131115|6896_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 267.83
//
Query:       MMETSP1325-20131115|6897_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1244  (0.0909889); expected 273.4 (0.02)
Passed bias filter:                      565  (0.0413253); expected 273.4 (0.02)
Passed Vit filter:                       118  (0.00863078); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|6898_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.59
# Mc/sec: 264.01
//
Query:       MMETSP1325-20131115|6891_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-63  208.3   4.4    1.3e-20   72.7   0.1    3.0  3  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.1   1.5e-23   2.1e-19       4      93 ..       3      89 ..       1      92 [. 0.94
   2 !   72.7   0.1   9.4e-25   1.3e-20       3      95 ..      95     184 ..      93     185 .. 0.95
   3 !   67.7   0.0   3.5e-23   4.8e-19       5      92 ..     191     277 ..     188     281 .. 0.94

  Alignments for each domain:
  == domain 1    score: 68.8 bits;  conditional E-value: 1.5e-23
                HHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH- CS
  PF00153.22  4 svlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkklls 93
                +++k+++a++ +++ia+++++P+dvvKtrlq    +++    gi ++ + i keeG+ ++++G++p+++r+++++++++++y+ +k+ + 
  MMETSP1325-20131115|6891_1  3 GLVKEVAAAGGSAVIAVTFIHPIDVVKTRLQ---VGGKYASLGITGTAGVIAKEEGVISFWKGIGPAWMREASYTSLRLGLYNPIKHAFG 89
                578999*************************...88888999********************************************9886 PP

  == domain 2    score: 72.7 bits;  conditional E-value: 9.4e-25
                 HHHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH-GG CS
  PF00153.22   3 lsvlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkllskk 95 
                 ++++ ++laG++Agai++l+ +P+dv+Kt+++   + +++k  ++ +a + +yk++Gi g+yrGl +n+ r ++ ++ k+++y+++k++++k+
  MMETSP1325-20131115|6891_1  95 SPFILKFLAGSAAGAIGSLAGNPFDVLKTQMM---TADGEKVPTLGEAAGAMYKNQGIGGFYRGLEANIARAMVLNGTKMSCYDQIKQMIKKS 184
                 678899**************************...8888999***********************************************9985 PP

  == domain 3    score: 67.7 bits;  conditional E-value: 3.5e-23
                 HHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00153.22   5 vlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                 +  ++++++ Ag++ a+ ++P+d+v+trl+ +++ +++ y+g++d+++ki+  eG+ g+yrG+ p ++r +p++ +++ ++e l+ +l
  MMETSP1325-20131115|6891_1 191 IPTQFASAMGAGFFMATTVAPFDMVRTRLM-NQPPDAKIYSGAFDCFGKIMAAEGPGGFYRGFFPIWMRFAPTTCLQLIIFENLRGVL 277
                 567899************************.999999*********************************************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.33s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 1535.85
//
Query:       MMETSP1325-20131115|6899_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|6900_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|6901_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-10   38.7   0.0    7.3e-08   31.0   0.0    1.9  2  PF00996.13 GDP dissociation inhibitor
  ------ inclusion threshold ------
       0.78    8.9   9.1        2.1    7.5   6.3    1.7  1  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF00996.13  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   1.1e-11   7.3e-08      63     113 ..      16      66 ..       6      84 .. 0.88
   2 !    5.9   0.0   0.00043       2.9     115     142 ..     109     136 ..      99     139 .. 0.93

  Alignments for each domain:
  == domain 1    score: 31.0 bits;  conditional E-value: 1.1e-11
                 HHH---GGG--EESS--BEE----HHHHHHHTTGGGT--EEE----EEE-- CS
  PF00996.13  63 deklgksrdwnvDliPkfllanGeLvklLiktdvtrYlefkavegsyvyke 113
                 ++ l +sr+w++Dl  + ++a+Ge v l++ ++v  Ylefk++e+ +v++ 
  MMETSP1325-20131115|6901_1  16 ENALRQSRRWSLDLGAHAVYAAGESVDLMVSSGVGMYLEFKSMEALCVLEA 66 
                 567899*****************************************9975 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.00043
                 -EEE--SSHHHHHH-TT---HHHHHHHH CS
  PF00996.13 115 kivkvPanesealkskllgllekrrlkk 142
                 k+ +vP+ +++ ++s+ l+  ekr+l+k
  MMETSP1325-20131115|6901_1 109 KLWRVPCGKKDIFQSTALSAGEKRQLMK 136
                 7889*********************998 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.3   0.00031       2.1     155     209 ..      43      97 ..      35     136 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00031
   PF05308.6 155 llslsdesvslslkssstasvvisdpteepelevppppppPpPlpavslqqsasa 209
                 l+ +s   + l+ ks+++  v+  d ++++++ ++  +ppPpP+p++ l+q++s 
  MMETSP1325-20131115|6901_1  43 LMVSSGVGMYLEFKSMEALCVLEADTSTATSTAAETVEPPPPPPPSLLLRQETSG 97 
                 555566667777788888888889999999999999999999***99**999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 723.52
//
Query:       MMETSP1325-20131115|6904_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 404.09
//
Query:       MMETSP1325-20131115|6906_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 541.58
//
Query:       MMETSP1325-20131115|6907_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.2   0.3        4.1    7.2   0.0    2.5  3  PF09248.5 Domain of unknown function (DUF1965)
       0.28   11.3   3.1       0.63   10.2   2.1    1.5  1  PF13922.1 PHD domain of transcriptional enhancer, Asx


Domain annotation for each model (and alignments):
>> PF09248.5  Domain of unknown function (DUF1965)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.022   1.5e+02       9      37 ..      31      59 ..      27      78 .. 0.71
   2 ?   -1.6   0.0      0.33   2.2e+03       3      12 ..      71      80 ..      69      83 .. 0.83
   3 ?    7.2   0.0    0.0006       4.1      10      35 ..      97     122 ..      92     124 .. 0.90

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.022
                ---EEEEE-----GGG-EEEEEEETTEEE CS
   PF09248.5  9 lGlyfksdvtGRDpSkWklegwlYndkfY 37
                +G+++  d+t  D   W  e+ l   +++
  MMETSP1325-20131115|6907_1 31 MGVHYFKDLTTQDSMTWVAENLLPVVVMF 59
                67778889999999999877766555555 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.33
                -GGG-B---E CS
   PF09248.5  3 aetllplGly 12
                a t++++Gl+
  MMETSP1325-20131115|6907_1 71 ASTVVQQGLF 80
                67999***99 PP

  == domain 3    score: 7.2 bits;  conditional E-value: 0.0006
                 --EEEEE-----GGG-EEEEEEETTE CS
   PF09248.5  10 GlyfksdvtGRDpSkWklegwlYndk 35 
                 G +   d t  D S W+ + +++nd+
  MMETSP1325-20131115|6907_1  97 GNFCDDDCTFEDTSIWSTMHFYFNDH 122
                 779999******************95 PP

>> PF13922.1  PHD domain of transcriptional enhancer, Asx
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.1   9.2e-05      0.63      47      57 ..      94     104 ..      92     107 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 9.2e-05
   PF13922.1  47 qqCGAFCHDDC 57 
                 q CG FC DDC
  MMETSP1325-20131115|6907_1  94 QMCGNFCDDDC 104
                 89********* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 662.82
//
Query:       MMETSP1325-20131115|6911_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 400.85
//
Query:       MMETSP1325-20131115|6909_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-12   46.2   0.0    3.7e-12   45.9   0.0    1.1  1  PF01242.14 6-pyruvoyl tetrahydropterin synthase


Domain annotation for each model (and alignments):
>> PF01242.14  6-pyruvoyl tetrahydropterin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   2.7e-16   3.7e-12       5      98 ..      44     135 ..      40     140 .. 0.89

  Alignments for each domain:
  == domain 1    score: 45.9 bits;  conditional E-value: 2.7e-16
                 EE--------TT--.-GGGS-------EEEEEEES..S------S-GGGGHHHHHHHHHHTTT-EEETT-TTHHHHS---HHHHHHHHHHHHHHHH CS
  PF01242.14   5 efeFeaaHrlpshe.gkcrrlHGHsykvevtvegee.ldetgmvvDfkelkkilkevleelDhkllneddpeleellspTaEnlakliferlkekl 98 
                 + +  +aH + + e g++++lHG +y+v+v+  ++e  +  ++v+D++ +++il evl+ ++ k+ln   + ++e + +T+E ++  i++++++++
  MMETSP1325-20131115|6909_1  44 RDSVMIAHSFSGAEfGPAQQLHGATYTVDVEWVANElCPGPNWVIDIGVASSILSEVLALYNFKNLN---ELFPEEN-TTTEFMCMQIHKEISRRV 135
                 5667899****6666****************99998688999*************************...7788877.9**************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 708.92
//
Query:       MMETSP1325-20131115|6916_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.32s 00:00:00.64 Elapsed: 00:00:00.44
# Mc/sec: 413.92
//
Query:       MMETSP1325-20131115|6917_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00018   20.5   0.3    0.00041   19.4   0.2    1.5  1  PF13202.1  EF hand
     0.0019   17.2   0.0     0.0031   16.5   0.0    1.4  1  PF00036.27 EF hand
     0.0019   18.1   0.1     0.0024   17.8   0.0    1.2  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
       0.08   12.7   0.0       0.11   12.2   0.0    1.4  1  PF13405.1  EF-hand domain
       0.27   10.8   0.3       0.27   10.8   0.2    1.8  2  PF00404.13 Dockerin type I repeat


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.2   1.5e-07   0.00041       8      20 ..      29      41 ..      28      43 .. 0.94

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 1.5e-07
                H--S----B-HHH CS
   PF13202.1  8 fDlNgDGkIsreE 20
                +DlNgDGk+s+eE
  MMETSP1325-20131115|6917_1 29 MDLNGDGKVSIEE 41
                8***********9 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.1e-06    0.0031       2      22 ..      22      42 ..      21      48 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.1e-06
                HHHHHHHHCTTTSSEBEHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEf 22
                l+++   +D +gdGk+s eE 
  MMETSP1325-20131115|6917_1 22 LERVCGDMDLNGDGKVSIEEA 42
                56677789***********95 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   8.6e-07    0.0024      36      61 ..      16      41 ..       3      46 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 8.6e-07
   PF13499.1 36 eevrevldyifkelDkngdGvlsfeE 61
                 e++ +l+++ +++D+ngdG++s eE
  MMETSP1325-20131115|6917_1 16 MELDLMLERVCGDMDLNGDGKVSIEE 41
                5778899999***************9 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.2e-05      0.11       8      28 ..      28      48 ..      21      63 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.2e-05
                CC-------B---HHHHHHH. CS
   PF13405.1  8 lfDkdgdGkidaeELrdaLrk 28
                 +D +gdGk+++eE +  L++
  MMETSP1325-20131115|6917_1 28 DMDLNGDGKVSIEEAIIYLKQ 48
                58************9888886 PP

>> PF00404.13  Dockerin type I repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       2.6   7.2e+03      11      15 ..      18      22 ..      18      22 .. 0.77
   2 ?   10.8   0.2    0.0001      0.27       1       9 [.      30      38 ..      30      39 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 2.6
                HHHHH CS
  PF00404.13 11 lDlal 15
                lDl+l
  MMETSP1325-20131115|6917_1 18 LDLML 22
                79986 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.0001
                -TT-SS--S CS
  PF00404.13  1 DVNgDGkVn 9 
                D+NgDGkV+
  MMETSP1325-20131115|6917_1 30 DLNGDGKVS 38
                9*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|6912_1  [L=326]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-18   66.4   0.5      5e-18   65.3   0.4    1.6  1  PF04969.11 CS domain
    1.5e-13   50.3   0.3    4.6e-13   48.7   0.0    2.0  2  PF14050.1  N-terminal conserved domain of Nudc.
  ------ inclusion threshold ------
        7.1    5.9  12.3          1    8.7   5.7    1.6  2  PF03064.11 HSV U79 / HCMV P34


Domain annotation for each model (and alignments):
>> PF04969.11  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.4   1.1e-21     5e-18       2      78 .]     168     242 ..     167     242 .. 0.98

  Alignments for each domain:
  == domain 1    score: 65.3 bits;  conditional E-value: 1.1e-21
                 --EEEEETTEEEEEEE-------S-EEEEE----EEEEE---....EEE---BSS-EEEEEEEEEE---.EEEEEEEE CS
  PF04969.11   2 rydWyQtleeVtitipvkgvikkedvkveikkkslkvsikgpgekeyllegeLfgeIdpeesswkiedt.kieitLkK 78 
                 +y+W+Q+l ++ + +pv+ ++k++d+ v+i++++lkv++kg   ke++leg+L + + +++s w++ed+ +++itL+K
  MMETSP1325-20131115|6912_1 168 NYSWTQQLGDLQVVVPVPVGTKGRDLVVDITQTKLKVGLKG---KEPILEGTLTKRVIVDDSFWTLEDSkEVVITLQK 242
                 8****************************************...*************************9*******9 PP

>> PF14050.1  N-terminal conserved domain of Nudc.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.0     1e-16   4.6e-13      15      62 .]       2      40 ..       1      40 [. 0.97
   2 ?   -2.9   0.0       1.3     6e+03      43      61 ..     292     312 ..     287     313 .. 0.62

  Alignments for each domain:
  == domain 1    score: 48.7 bits;  conditional E-value: 1e-16
   PF14050.1 15 ggiedLLdtfFsFLerkTDFfhkadlnndkmGfkpgeaeqlvmksfrk 62
                +gie LLdt+FsFL+rkTDFf+         G++p+   + vmk++rk
  MMETSP1325-20131115|6912_1  2 QGIEPLLDTVFSFLRRKTDFFT---------GASPEVVTETVMKIVRK 40
                79********************.........**************998 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.3
   PF14050.1  43 dkmG..fkpgeaeqlvmksfr 61 
                 + mG  +  ++ ++ v+++f 
  MMETSP1325-20131115|6912_1 292 KAMGlpTADEQKKNEVLQNFM 312
                 455543556777788888875 PP

>> PF03064.11  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   5.7   0.00022         1     147     208 ..      32      93 ..      17     109 .. 0.83
   2 ?   -2.5   0.1      0.57   2.6e+03     163     182 ..     275     294 ..     237     316 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00022
  PF03064.11 147 aevaekvcralsrkksdderkkksakqkekRrdedskkkkedrkkkqeekrtsdedkrsgkg 208
                 + v++ v + +++  + +++kkk+ + +ekR ++  +   e++kkk+ee+r+    k++  +
  MMETSP1325-20131115|6912_1  32 ETVMKIVRKHAELADRTNTEKKKTRDAEEKRAKKARQAVAEKQKKKDEEERKARAAKAKAAE 93 
                 45556667778899999999**************99************99999888887665 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.57
  PF03064.11 163 dderkkksakqkekRrdeds 182
                 d+e ++  +k     r++ +
  MMETSP1325-20131115|6912_1 275 DGETRQTVEKMMYDQRQKAM 294
                 44444444444433333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2175  (0.159084); expected 273.4 (0.02)
Passed bias filter:                      779  (0.0569778); expected 273.4 (0.02)
Passed Vit filter:                       131  (0.00958163); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.93u 0.40s 00:00:01.33 Elapsed: 00:00:00.62
# Mc/sec: 1260.02
//
Query:       MMETSP1325-20131115|6915_1  [L=373]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       570  (0.041691); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.53
# Mc/sec: 1686.49
//
Query:       MMETSP1325-20131115|6919_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.6    7.8  11.7        5.3    6.8   8.1    1.6  1  PF04554.8 Extensin-like region


Domain annotation for each model (and alignments):
>> PF04554.8  Extensin-like region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   8.1   0.00039       5.3       6      37 ..      16      51 ..       9      53 .] 0.80

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00039
   PF04554.8  6 pPppekssPpppyvyksPPPp...sp.ykYksPPPp 37
                 Ppp+   P pp +  sPP      p ++ +sPP p
  MMETSP1325-20131115|6919_1 16 TPPPVLAVPAPPEMLTSPPSKvvdWPaHMLTSPPTP 51
                58999999*********9999654226999999977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       63  (0.00460796); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 244.24
//
Query:       MMETSP1325-20131115|6918_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 642.22
//
Query:       MMETSP1325-20131115|6923_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-21   75.1   0.2      5e-21   75.1   0.1    1.0  1  PF08920.5 Splicing factor 3B subunit 1


Domain annotation for each model (and alignments):
>> PF08920.5  Splicing factor 3B subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.1   3.6e-25     5e-21      74     128 ..       2      55 ..       1      58 [] 0.92

  Alignments for each domain:
  == domain 1    score: 75.1 bits;  conditional E-value: 3.6e-25
   PF08920.5  74 kikkeieeRnrpltDEeLdelLPseGYeilepPegYepirkpkrkllakptpias 128
                 ++++e+eeRnrpl+DEeL++++P  GY+il+pP+gY+p+r+ + +lla+ptpi++
  MMETSP1325-20131115|6923_1   2 RWEREVEERNRPLSDEELNAMFPPTGYKILDPPPGYQPVRN-EARLLATPTPIGQ 55 
                 799*************************************6.6889999999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|6926_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.28    8.8   3.9       0.97    7.0   2.7    1.7  1  PF05993.7 Reovirus major virion structural protein Mu-1/Mu-1C (M2)


Domain annotation for each model (and alignments):
>> PF05993.7  Reovirus major virion structural protein Mu-1/Mu-1C (M2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   2.7   7.1e-05      0.97     223     288 ..      99     165 ..       5     181 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 7.1e-05
                 -TT-GGGT-HHHHHHHHHTT----B--BS---------S-HHH.HHHHS-BTTB--HHHHHHHHHHH CS
   PF05993.7 223 PddslilryPkeaavvlikrygalknmdvkegdvqaealneva.aaalaasaevgsleeksklleqa 288
                  +d+ i+   ke+  +++ r+ a   +d    + ++  ++ va +a  a++aev + e +s l e  
  MMETSP1325-20131115|6926_1  99 MKDERIQALAKEMRKTAADRNKARGSIDAGGETTKSSEVGRVAkGAKVATTAEVETTEHRSALDEEG 165
                 468899999*********************************955667999********99997764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       723  (0.0528818); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 1188.19
//
Query:       MMETSP1325-20131115|6927_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       775  (0.0566852); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 484.26
//
Query:       MMETSP1325-20131115|6928_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-28   98.3   0.1    3.4e-28   98.2   0.1    1.0  1  PF00368.13 Hydroxymethylglutaryl-coenzyme A reductase


Domain annotation for each model (and alignments):
>> PF00368.13  Hydroxymethylglutaryl-coenzyme A reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.2   0.1   2.5e-32   3.4e-28      58     150 ..       3      97 .]       1      97 [] 0.96

  Alignments for each domain:
  == domain 1    score: 98.2 bits;  conditional E-value: 2.5e-32
  PF00368.13  58 ingkeylvPlAttEgalVAsanrgakairesgGvktvvlkdgmtrapvvrfesveeaaelkawie..enfeelkeaaestsrfgklkkievviag 150
                 ++++ +++P+AttEg+lVAs++rgakai+e+gG+ + v+kdg+trap++ ++++  aa+lk w+e  +n  ++++a++st++fgk+k+++v++ag
  MMETSP1325-20131115|6928_1   3 LDNEPVYIPMATTEGCLVASTQRGAKAISEGGGAVSIVVKDGITRAPAMLLPTAMAAAQLKLWVEdeANWPAIEAAFNSTTNFGKIKSVSVAVAG 97 
                 68888************************************************************888999*******************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 438.58
//
Query:       MMETSP1325-20131115|6929_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-08   33.6   0.0    2.9e-08   33.5   0.0    1.0  1  PF07987.6 Domain of unkown function (DUF1775)


Domain annotation for each model (and alignments):
>> PF07987.6  Domain of unkown function (DUF1775)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   2.1e-12   2.9e-08       9      97 ..       4      98 ..       1      99 [] 0.89

  Alignments for each domain:
  == domain 1    score: 33.5 bits;  conditional E-value: 2.1e-12
   PF07987.6  9 aaagsyekltlrVphecdga.aTtkvevklPeg....vtsvkpepkpGwkleveksklak.pykshgkevtegvtevtWtagagledgqfdefvl 97
                +++++y   +lr++h c+   +Tt+v v++P+     v s +   + +w+++ +++++++  y+shg+ v+ +++++ +ta++ + d+ f +f++
  MMETSP1325-20131115|6929_1  4 TTSDKYMSTNLRIGHACSSDnPTTSVVVEFPKFadwaVLSIRGGSMWNWDYKYTTRNISTmGYTSHGSAVETTIDTINFTAHEPVGDELFVDFPI 98
                6789999**********97669*********96668899999999999*****999987626999************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 474.48
//
Query:       MMETSP1325-20131115|6931_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 306.90
//
Query:       MMETSP1325-20131115|6930_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0017   18.1   0.0     0.0093   15.7   0.0    1.9  2  PF12814.2 Meiotic cell cortex C-terminal pleckstrin homology


Domain annotation for each model (and alignments):
>> PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   6.8e-07    0.0093       3      73 ..      90     150 ..      88     165 .. 0.78
   2 ?   -0.2   0.0     0.056   7.6e+02      90     120 ..     184     214 ..     173     217 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 6.8e-07
   PF12814.2   3 idaiaqtmvGeylyKyvrrrkskgsekrhkRyvwvhpyertllWsskkpksekasekksksvkiesvlsvk 73 
                  + i  +m G  l+K+ ++       ++h+R ++ +++ +t+ W++++ +++k++     + +i+ ++++ 
  MMETSP1325-20131115|6930_1  90 KNFIDSMMAGIVLIKHGKQG------DPHRRRIFCDENVETISWKKENGSQAKNKD----AYPITGIKEIR 150
                 6779999********99988......8*******************8865444443....36666666665 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.056
   PF12814.2  90 sililtpkralkltaetrerhevWltaLsyl 120
                 s +i+ ++r+l l+++tr + +  ++  ++l
  MMETSP1325-20131115|6930_1 184 SFSIIWEERTLDLQCHTRLECKYLIHCFRQL 214
                 6789999********9998777666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.51
# Mc/sec: 1207.58
//
Query:       MMETSP1325-20131115|6932_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   14.3   0.4       0.04   13.7   0.3    1.3  1  PF06493.6 Protein of unknown function (DUF1096)


Domain annotation for each model (and alignments):
>> PF06493.6  Protein of unknown function (DUF1096)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   2.9e-06      0.04       4      21 ..     150     167 ..     147     176 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.9e-06
   PF06493.6   4 vlRekRqsCgCaqpqqps 21 
                 ++R +Rq C+Ca++ +++
  MMETSP1325-20131115|6932_1 150 SQRMRRQQCDCASNMRSK 167
                 78**********988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 1099.50
//
Query:       MMETSP1325-20131115|6933_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.31s 00:00:00.65 Elapsed: 00:00:00.44
# Mc/sec: 392.13
//
Query:       MMETSP1325-20131115|6922_1  [L=605]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-64  215.2   0.0    1.3e-63  214.4   0.0    1.4  1  PF00069.20 Protein kinase domain
    9.8e-33  113.2   0.6    1.3e-31  109.5   0.4    2.0  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.045   12.2   0.2      0.064   11.7   0.2    1.1  1  PF07914.6  Protein of unknown function (DUF1679)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.4   0.0   2.9e-67   1.3e-63       5     260 .]     170     524 ..     167     524 .. 0.95

  Alignments for each domain:
  == domain 1    score: 214.4 bits;  conditional E-value: 2.9e-67
                 EEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEE........................STEEEEEEE--SC-EHHHHHH................HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC--..-TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH..........................................................HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   5 eklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfee........................kdelylvleyveggdlfdllk................kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgk..lpfsgeseedqleliekilkkkleedepksssks..........................................................eelkdlikkllekdpakRltaeeilkhpwl 260
                 + +G+G++GkVykak k+t ++vA+K++k e+e++   +ta+rE+kil+kl+H+niv l+e++++                        +d++y+v+ey++  dl+ l++                 + +l+e ++k++++q++eg++++H+n+++HrDLK+ NiL+d++g lki D+Gla++ +++ e++tt v t +Y++PE+ll+ ++y+ ++DvWs+G+i+ ell +k  +p +++se++qle+i   l+++  ++ p  +                                                               + dl++k+l++dp+kR+ a+++l+h+++
  MMETSP1325-20131115|6922_1 170 DAIGEGQYGKVYKAKCKTTDRIVALKKIKMESEREGFPITAIREIKILQKLKHKNIVDLVEMITDkeeakaerrrqeasgnilsasdfvDDSIYMVFEYADY-DLSGLIEyhnqdaqrrsvdpthaVSVNLKEAHVKSYMKQLCEGVHFMHKNKFLHRDLKSPNILVDRNGCLKIGDWGLARNWTEKLERYTTPVITLWYRPPELLLGMTKYDFSIDVWSVGCIFGELLQKKalMPAPQNSEAQQLECIWDLLGTPKLQSTPGANGCAenpeyqydvwpgaaqcplfnsmgvmdrprtrrlqqrfggeghiirpssakpinprddtVLMLDLLEKMLTFDPKKRIMAAQALEHDYF 524
                 68**************************************************************************************************99.8888888888999888888887778888*****************************************************************************************************4445556699999999*9999999988888765444889*****************************************************988899***********************997 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   0.4   2.8e-35   1.3e-31       3     216 ..     168     415 ..     167     430 .. 0.84

  Alignments for each domain:
  == domain 1    score: 109.5 bits;  conditional E-value: 2.8e-35
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHH.HHHHHHHHHHHHHT-BTTB--BEEEBESSSS........................EEEEEE---B--HHHHHHHT..............GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE.EEHHHHHHH---HHHHHHTTT-.GTTTTSHHHHHHH CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeee.keefleeakimkklkhpnivkllgvctkeep........................llivteyvkgGdLlefLrkk..............ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEiftlge.spypglsneevle 216
                 + + +GeG++GkV+++++k    +++  Va+K++k ++e+e      ++e+ki++klkh+niv l+ ++t++e+                        +++v+ey+++ dL+ +++ +               + +l+ +++ +++ q+++G+++++++k++HrdL + N+L++++ + ki+D GLar+   +++ ++ ++  + + + +pE+l  ++ +    DvWs G++  E+++  + +p p+ s+++ le
  MMETSP1325-20131115|6922_1 168 FADAIGEGQYGKVYKAKCK----TTDRIVALKKIKMESEREGfPITAIREIKILQKLKHKNIVDLVEMITDKEEakaerrrqeasgnilsasdfvddsIYMVFEYADY-DLSGLIEYHnqdaqrrsvdpthaVSVNLKEAHVKSYMKQLCEGVHFMHKNKFLHRDLKSPNILVDRNGCLKIGDWGLARNW--TEKLERYTTPVITLWYRPPELLLGMTkYDFSIDVWSVGCIFGELLQKKAlMPAPQNSEAQQLE 415
                 6678***************....9999*******87766665478899**********************55554566677778888888888888888888888877.566666555778*********99899999999*************************************************..56666666666777777***98876559****************9876547777776666555 PP

>> PF07914.6  Protein of unknown function (DUF1679)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   1.4e-05     0.064     136     285 ..     191     338 ..     178     349 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.4e-05
   PF07914.6 136 vyflkkfdeenklkgyiimeyvedihtlemyenisadelipvlkaiA.tlqalslslseeekksa.sgadfleevleellseeelkkifeqlrkilgaeeeekveelvdiveeylkeililkkatnvskvlGi..kkvlvhgDlwqaNiLfsee 285
                 + +lkk++ e++  g+ i      i +++++++++ ++++ +++ i  + +a +++  +e   ++ s +df+++++ ++++ ++     + l++  +++ + +  + +++v+  lke    + ++++++ + +  k+ + h+Dl + NiL  ++
  MMETSP1325-20131115|6922_1 191 IVALKKIKMESEREGFPI----TAIREIKILQKLKHKNIVDLVEMITdKEEAKAERRRQEASGNIlSASDFVDDSIYMVFEYADY--DLSGLIEYHNQDAQRRSVDPTHAVSVNLKEAHVKSYMKQLCEGVHFmhKNKFLHRDLKSPNILVDRN 338
                 666777777777777754....4677788888999999999999998345788888888888888899*********99988544..34555555556668888888999999989999989999999999887899*************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       590  (0.0431539); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.14u 0.38s 00:00:01.52 Elapsed: 00:00:00.73
# Mc/sec: 1986.02
//
Query:       MMETSP1325-20131115|6935_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.41s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|6934_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.45s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 710.50
//
Query:       MMETSP1325-20131115|6936_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.44s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 357.01
//
Query:       MMETSP1325-20131115|6937_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.41s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 449.93
//
Query:       MMETSP1325-20131115|6938_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.41s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 334.49
//
Query:       MMETSP1325-20131115|6939_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 579.92
//
Query:       MMETSP1325-20131115|6942_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1    7.8   3.9        1.1    7.8   2.7    1.0  1  PF10310.4 Protein of unknown function (DUF2413)


Domain annotation for each model (and alignments):
>> PF10310.4  Protein of unknown function (DUF2413)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.7   8.1e-05       1.1      91     168 ..      11      87 ..       2     104 .. 0.50

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 8.1e-05
   PF10310.4  91 eseesseekskapeteseeeeeeeetpepiasiggwWsWgsilstasslasaavkqA..eqavkeiqqneeakkqaeqvr 168
                 +se+++++ ++a+++++++ ++e   ++p++  gg    gs  +ta+++a a+   A  ++a + +++ e a  ++  vr
  MMETSP1325-20131115|6942_1  11 TSEDEDDA-AEAEAAAKAKLASEGPSNDPAKGEGGEGG-GSSHATATATATATATAAdpSNAEDPLNT-EGAVVASSAVR 87 
                 22222222.23333333333455555555555555443.55555555555555555511566777777.66666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       481  (0.0351814); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 567.83
//
Query:       MMETSP1325-20131115|6943_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        4.2    7.2  12.0        4.5    7.1   8.3    1.1  1  PF11106.3 Exopolysaccharide production protein YjbE


Domain annotation for each model (and alignments):
>> PF11106.3  Exopolysaccharide production protein YjbE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   8.3   0.00033       4.5      41      75 ..       2      36 ..       1      41 [. 0.51

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00033
   PF11106.3 41 sssatavstvssvvGvalaatGGGdGsntGttttt 75
                sss++++s+ ss v    a   GG G n+G+ +t 
  MMETSP1325-20131115|6943_1  2 SSSSSSSSSSSSEVASLGAVGSGGGGDNSGADSTR 36
                34444444444444443344446667777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 222.21
//
Query:       MMETSP1325-20131115|6949_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 777.59
//
Query:       MMETSP1325-20131115|6940_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       449  (0.0328408); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 282.24
//
Query:       MMETSP1325-20131115|6948_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 971.86
//
Query:       MMETSP1325-20131115|6951_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 802.05
//
Query:       MMETSP1325-20131115|6952_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-07   29.5   0.0    4.2e-07   29.1   0.0    1.2  1  PF09412.5 Endoribonuclease XendoU


Domain annotation for each model (and alignments):
>> PF09412.5  Endoribonuclease XendoU
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   3.1e-11   4.2e-07       3      58 ..     112     167 ..     110     169 .] 0.93

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 3.1e-11
   PF09412.5   3 sdaelstlaqelwelDenrltpgadyklnlqkkasssekedeaskpLfskvdeekl 58 
                 + ++ls ++++lw+lD  rl pg dy+++lq+ ++ + + d a+ pLf++v  ++l
  MMETSP1325-20131115|6952_1 112 ELEDLSMACTKLWSLDYARLAPGMDYMIDLQQGKKPYCQGDFAEGPLFKFVAPDVL 167
                 66899*********************************************987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 861.67
//
Query:       MMETSP1325-20131115|6946_1  [L=422]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-48  165.8   2.0    1.6e-48  165.3   1.4    1.2  1  PF00109.21 Beta-ketoacyl synthase, N-terminal domain
    1.6e-34  118.1   1.4    2.8e-34  117.3   0.4    1.8  2  PF02801.17 Beta-ketoacyl synthase, C-terminal domain
    0.00017   20.5   1.7    0.00068   18.5   0.7    2.0  2  PF00108.18 Thiolase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00109.21  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.3   1.4   3.5e-52   1.6e-48       2     255 .]       8     254 ..       7     254 .. 0.84

  Alignments for each domain:
  == domain 1    score: 165.3 bits;  conditional E-value: 3.5e-52
                 --EEEEEEE---SS-SSHHHHHHHHH------ECCH.....HHHTT..-S--EE---SS........S-GGGG--HHHHC...CS-HHHHHHHHHHHHHHHH----....HTTGCEEEB------..HHHHHCCCH.---.-TTS-TTHHHHHS----CCCHHTTTT-----BEEE-GGGHHHHHHHHH.HHHH----SEEEE--------HHHHHHHHCTT.-S-ST.SG....GGS--TTB--------.--EEEEEEHHH CS
  PF00109.21   2 epvaivGmgcrfpggvgpeefwelllegrdaisefpadrwdasely.dpdsraageiysreggfldiddfdaaffgispreaeamDpqqrlaleaawealedagldpeslegsdrvgvfiGsgig..dyaelqaldeaggkprkvspyatgaalpsviagrisyalglrGpsvtvdtacsSslvalhaavqslregeadlalaGGvelllspetfaafsaag.llspd.gr....ckafdpfadGfvlGEGvGavllkrlsea 255
                 ++v+++G+g +   g + eef e ll g++  +++   r+d+s      + r ag+ ++          ++a +f   p+ a++ D+ +++a++aa+ al da+l+ es ++s+ vgv+iGs+ g  ++ e+q+l+ ++g  +kvsp+ ++ +l +++ag + + +g++Gp++  ++ac+S+   + aa++ +++g+ad+++aGG+e++++p +fa+f++++ + +++ +     +++fd++  Gfv+GEG+G+++l+ l++a
  MMETSP1325-20131115|6946_1   8 TRVVVTGLGPVNGVGMNQEEFFEGLLHGKSSLGDIT--RFDVSPDIfFVQDRLAGDDDF----------VAADYFTN-PKSAKSNDRYTHFAVAAARLALDDAKLEVESCDQSR-VGVVIGSAFGgmETYETQTLKAHNG--KKVSPFTIPGLLGNTAAGIVGIEFGCKGPNFGAVSACASATHSMGAAMEFIQKGDADVMIAGGTEAAITPTSFAGFCSMKaMCTQHnDSptlgSRPFDADRCGFVMGEGAGVLVLESLDHA 254
                 59*******************************666..444443311133344444443..........45555555.55599************************9999998.**********763346667775554..89***999999*****************************77777777********************************988888633677788888888********999999998765 PP

>> PF02801.17  Beta-ketoacyl synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.2   5.3e+03      28      43 ..      87     102 ..      69     106 .. 0.68
   2 !  117.3   0.4   6.3e-38   2.8e-34       1     118 [.     262     376 ..     262     377 .. 0.97

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.2
                 HHHHHHHHHH--S-GG CS
  PF02801.17  28 arairkalaeagldpe 43 
                  +a+r al++a+l+ e
  MMETSP1325-20131115|6946_1  87 VAAARLALDDAKLEVE 102
                 4567788888887765 PP

  == domain 2    score: 117.3 bits;  conditional E-value: 6.3e-38
                 SEEE-----B-.-SS-SSS--------HHHHHHHHHH--S-GGGECEEE----------HHHHHHHHHH--...TT..CEEE-GGGT----------HHHHHHHHHHH---B---TT- CS
  PF02801.17   1 yaviagsavnqdgaasnsltapngeaqarairkalaeagldpedvdyveahGtGtplgDpiEaealkavfgekarkqplavgSvKsniGHleaAaGvaelikvvlalrhgvipptlnl 118
                 y++ +g+++++ +a++++ +ap+ge++ r i+ al+ +g++ ++vdy++ahGt+t+ +D+ E+ a+k vfge+a++  l+++S+K  +GH+++AaG +e+i+++ a+ +  ippt+n+
  MMETSP1325-20131115|6946_1 262 YCEAVGYGASC-DAHHITTPAPEGEGLGRSIELALKGSGVEHNEVDYINAHGTSTAYNDKFETMAIKGVFGEHAHD--LYISSTKGVTGHTLGAAGGLEAIACAKAIDTCKIPPTVNY 376
                 8999*******.55***********************************************************955..**************************************98 PP

>> PF00108.18  Thiolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0     0.069   3.1e+02      28      84 ..      84     141 ..      74     155 .. 0.78
   2 !   18.5   0.7   1.5e-07   0.00068      86     117 ..     168     199 ..     147     222 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.069
                 HHHHHHHHHHHHH-TCHHHCEEEEEE---S-STT.--HHHHHHHHHSSS-TTSEEEEE CS
  PF00108.18  28 dLgaavlkallekakvkaeevdevilGnVlqage.gqnpaRqaalkaglpeevpaltv 84 
                 + + a+ + +l +ak++ e  d+  +G V+ ++  g+    + +lka   ++v+ +t+
  MMETSP1325-20131115|6946_1  84 HFAVAAARLALDDAKLEVESCDQSRVGVVIGSAFgGMETYETQTLKAHNGKKVSPFTI 141
                 5566677789999****************99887456666666788888888777776 PP

  == domain 2    score: 18.5 bits;  conditional E-value: 1.5e-07
                 -GGG-HHHHHHHHHHHHH----SEEEE----- CS
  PF00108.18  86 kvCgSglkavalaaqkiaageadivvagGvEs 117
                  +C+S+ +++  a++ i+ g+ad+++agG+E 
  MMETSP1325-20131115|6946_1 168 SACASATHSMGAAMEFIQKGDADVMIAGGTEA 199
                 68****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.35s 00:00:01.08 Elapsed: 00:00:00.55
# Mc/sec: 1838.66
//
Query:       MMETSP1325-20131115|6953_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.2   0.1       0.15   11.8   0.1    1.2  1  PF03004.9 Plant transposase (Ptta/En/Spm family)


Domain annotation for each model (and alignments):
>> PF03004.9  Plant transposase (Ptta/En/Spm family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   1.1e-05      0.15      55      79 ..      77     101 ..      63     113 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.1e-05
   PF03004.9  55 gktpdraevfieTHtkkDGtyvdek 79 
                 g +p  +  f+ TH+ kDGt+++ +
  MMETSP1325-20131115|6953_1  77 GHQPYSVTFFKSTHKTKDGTWIQTH 101
                 77888999*************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 682.74
//
Query:       MMETSP1325-20131115|6954_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-11   42.7   0.0      1e-10   41.9   0.0    1.5  1  PF05517.7 p25-alpha


Domain annotation for each model (and alignments):
>> PF05517.7  p25-alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.0   7.6e-15     1e-10       2      89 ..     125     218 ..     124     238 .. 0.90

  Alignments for each domain:
  == domain 1    score: 41.9 bits;  conditional E-value: 7.6e-15
   PF05517.7   2 eaaFkkFasfg.....kaekkemdsktfakllkdc.kvldkkvtatdvdiiFskvkaksarrityeqFkkalkelaekkkkkkseaeelkeklv 89 
                 +  Fk  ++fg       + k++d+++f k++k + ++l k+vt+++vd++F k k +  rr +y+ F  al +l   ++ +++ +++++ +l+
  MMETSP1325-20131115|6954_1 125 KYIFKYCCTFGrtsgdGMDAKTIDNANFIKMIKKApGFLTKRVTTQHVDVVFTKCKPRGGRRLNYSRFLDALFQLGMVRYPDEDPVNAFTYMLT 218
                 6679999****987777788999*********9985788999*********************************9999999998888888884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1455.90
//
Query:       MMETSP1325-20131115|6961_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 346.62
//
Query:       MMETSP1325-20131115|6962_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 275.14
//
Query:       MMETSP1325-20131115|6956_1  [L=355]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   15.7   0.6     0.0037   15.3   0.4    1.1  1  PF06248.8  Centromere/kinetochore Zw10
  ------ inclusion threshold ------
        1.4    8.4   5.6       0.47    9.9   1.0    2.4  2  PF02151.14 UvrB/uvrC motif


Domain annotation for each model (and alignments):
>> PF06248.8  Centromere/kinetochore Zw10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.4   5.4e-07    0.0037      48     137 ..     188     283 ..     173     331 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 5.4e-07
   PF06248.8  48 aeellekvsslsedisdllkskveneilqdlkdaveelaelkqqleekelvlk..llkkllkideal....eelnealkgkdylkaaklleelksl 137
                  + ll +   l++ ++d+ k+  e+  ++d+++a++  a ++qq+e ++  +k   l +++ +d  +    +e+  a ++kd++ka kl  e+++l
  MMETSP1325-20131115|6956_1 188 KDRLLPRLPTLGDHVKDIFKRDHERRLAADEEKAQQAAAGIRQQVEASRSEIKgrHLARIKGFDAKIaaidQEMMAAVQSKDFVKAGKLQVEIQEL 283
                 5678899999**********************************99877666422899*********999999999**********9999998875 PP

>> PF02151.14  UvrB/uvrC motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.19   1.3e+03      23      33 ..     225     235 ..     223     238 .. 0.81
   2 ?    9.9   1.0   6.9e-05      0.47       2      34 ..     252     284 ..     251     286 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.19
  PF02151.14  23 AAklRDqinal 33 
                 AA +R q++a 
  MMETSP1325-20131115|6956_1 225 AAGIRQQVEAS 235
                 999**999875 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 6.9e-05
  PF02151.14   2 kllkeLeeemeeAaeeedFEkAAklRDqinale 34 
                  +++ + +em +A+ + dF kA kl  +i +l 
  MMETSP1325-20131115|6956_1 252 AKIAAIDQEMMAAVQSKDFVKAGKLQVEIQELN 284
                 57889999*********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.54
# Mc/sec: 1575.38
//
Query:       MMETSP1325-20131115|6959_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-11   42.0   0.6    5.4e-11   41.6   0.4    1.2  1  PF08324.6 PUL domain


Domain annotation for each model (and alignments):
>> PF08324.6  PUL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.4   3.9e-15   5.4e-11     116     228 ..      18     151 ..       7     199 .. 0.79

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 3.9e-15
                 H------SHHHHHHHHHHHHHHTT-S----TTTTSHH......THHHHS-S--SS--H....HHHHHHHHHHHHHHHHHHHHH----...........-TTHHH.HHHHHHHH.-HHHHTSHHHHHHHHHH---H CS
   PF08324.6 116 llvsnsanpalllltlRllaNlfsnslgrnlllskdd......sildllsvlksslla....enknlqiAlatlllNlavlllenns...........deeakaellasilea.lseeesdeEalyRllvAlGtl 228
                 + +  sa+ a +l++lR+++Nl +n + r  ++ ++       + ld + +l s l++     nkn+  A+a+ll N+av+   + +             +a  ++ a ++    s  ++d E++yRl++A   l
  MMETSP1325-20131115|6959_1  18 NATDASAPMAVQLMSLRFACNLLANRESRGAVAAQAAvgdeanNPLDVFTTLASALIEggskTNKNVSSAAASLLVNIAVMCSPTEAtsagwsplrvtS-QADRAMAAVASGLgGSGTATDDEVTYRLVLAADIL 151
                 445566999***************************99**77755555555555555588899*******************99998888999887742.3333244444444789999***********97666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 987.89
//
Query:       MMETSP1325-20131115|6963_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-06   25.7   2.0    7.1e-06   25.6   1.4    1.1  1  PF08507.5  COPI associated protein
  ------ inclusion threshold ------
      0.041   13.2   0.7        1.4    8.3   0.1    2.2  2  PF02495.12 7kD viral coat protein
       0.12   11.6   2.6       0.15   11.3   1.8    1.1  1  PF13567.1  Domain of unknown function (DUF4131)
       0.23   11.0   2.5        6.2    6.4   0.0    2.1  2  PF06781.7  Uncharacterised protein family (UPF0233)
       0.82    8.9   4.1       0.96    8.6   2.8    1.0  1  PF01529.15 DHHC palmitoyltransferase
          5    5.5   7.4        6.1    5.2   5.1    1.0  1  PF04547.7  Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> PF08507.5  COPI associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   1.4   3.1e-09   7.1e-06      49     105 ..       4      73 ..       1      85 [. 0.67

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 3.1e-09
   PF08507.5  49 llEfklki.lykyasFlfsflGRGlfyiflgtlllss........svlsiiiglllflvG....liyivl 105
                 ++E+k +  ++ky+ Fl+   G++++yif g+l+++         s   +i +  l  +G    l++++l
  MMETSP1325-20131115|6963_1   4 IVEVKEFQaISKYFAFLYFAWGKAFYYIFFGLLIIGFscennsteSCWILITACALCAIGvlfgLAFCFL 73 
                 566643335**************************98899988884444444444444441000444444 PP

>> PF02495.12  7kD viral coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1   0.00061       1.4      11      32 ..      32      55 ..      27      55 .. 0.74
   2 ?    3.3   0.0     0.022        50       3      18 ..      58      73 ..      57      82 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00061
  PF02495.12 11 vallalylln..tsssegCvivIT 32
                 + l+++  +  ++s+e+C i+IT
  MMETSP1325-20131115|6963_1 32 FFGLLIIGFSceNNSTESCWILIT 55
                4555555555679**********9 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.022
  PF02495.12  3 llaligllvallalyl 18
                +l +ig+l  l++++l
  MMETSP1325-20131115|6963_1 58 ALCAIGVLFGLAFCFL 73
                57899*******9998 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.8   6.8e-05      0.15      10      70 ..      22      79 ..      12      85 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 6.8e-05
   PF13567.1 10 aslplgllllalllalllllllflkrrkrrrlllllglllllaglylllrapqpssndlsr 70
                + ++ +++ ++++l+++ + +      ++ + ++l+++++l+a + l+  a++  ++d ++
  MMETSP1325-20131115|6963_1 22 FAWGKAFYYIFFGLLIIGFSCEN---NSTESCWILITACALCAIGVLFGLAFCFLKKDEQK 79
                33333444445555555555554...889999************99999999888877665 PP

>> PF06781.7  Uncharacterised protein family (UPF0233)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.4    0.0064        15      63      81 ..      23      41 ..      10      45 .. 0.76
   2 ?    6.4   0.0    0.0027       6.2      26      52 ..      45      71 ..      41      83 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0064
   PF06781.7 63 dlgaWNlligfgllivGll 81
                ++g+  + i fglli+G+ 
  MMETSP1325-20131115|6963_1 23 AWGKAFYYIFFGLLIIGFS 41
                5677778888888888885 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0027
   PF06781.7 26 akpspvwfvalmvalmllGllwlvvfy 52
                +++++ w   + +al  +G+l+ + f 
  MMETSP1325-20131115|6963_1 45 NSTESCWILITACALCAIGVLFGLAFC 71
                467899**************9977764 PP

>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.8   0.00042      0.96      92     155 ..      15      72 ..      11      82 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00042
  PF01529.15  92 kyFllfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllflla 155
                 kyF  fl + +  +++++++ l i+   ++++++ s +i+     i+ + l+ai++lf l++++
  MMETSP1325-20131115|6963_1  15 KYF-AFLYFAWGKAFYYIFFGLLIIGFSCENNSTESCWIL-----ITACALCAIGVLFGLAFCF 72 
                 566.888888888888888889999999999999999987.....6677777777777777665 PP

>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   5.1    0.0027       6.1       8      63 ..      12      66 ..      11      69 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0027
   PF04547.7  8 kialYFawlgfytksllypavlGlilfllglsadqtfdniltvvfalfnvlwatlf 63
                 i+ YFa+l f     +y  ++Gl++  ++++ ++++++  +++ a+  +  ++lf
  MMETSP1325-20131115|6963_1 12 AISKYFAFLYFAWGKAFYYIFFGLLIIGFSCE-NNSTESCWILITACALCAIGVLF 66
                5899****************************.88888888899999999888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       642  (0.0469573); expected 273.4 (0.02)
Passed bias filter:                      464  (0.033938); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|6967_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-17   60.9   0.0    7.5e-17   60.7   0.0    1.1  1  PF00085.15 Thioredoxin
    2.4e-09   37.2   0.0    7.8e-09   35.6   0.0    1.8  1  PF13098.1  Thioredoxin-like domain
    4.2e-09   36.3   0.0      4e-06   26.7   0.0    2.0  2  PF13905.1  Thioredoxin-like
      1e-08   34.9   0.0    1.5e-08   34.3   0.0    1.3  1  PF13899.1  Thioredoxin-like
    0.00025   20.4   0.0    0.00033   20.0   0.0    1.2  1  PF13728.1  F plasmid transfer operon protein
    0.00072   19.0   0.0     0.0017   17.7   0.0    1.5  1  PF08534.5  Redoxin
     0.0018   17.8   0.0     0.0025   17.3   0.0    1.3  1  PF00578.16 AhpC/TSA family


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.0   3.8e-20   7.5e-17      18     102 ..       4      91 ..       1      93 [. 0.85

  Alignments for each domain:
  == domain 1    score: 60.7 bits;  conditional E-value: 3.8e-20
                 HSCEEEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETT..TTHHHHHHTT--SSSEEEEESS.SSEEEEE---.-HHHHHHHHH CS
  PF00085.15  18 dklvlvefyApwCGhCkalaPeyeklaeelkekvvlakvdvd..enkdlaseygvegiPtlklfkn.gkkveevegarekeklvaflk 102
                  ++v+v+fyA+wC  Ck +aP++ +l  +++++v ++ +d    +n+d +++++v+giP + ++   g+  + + g+ +  ++++ ++
  MMETSP1325-20131115|6967_1   4 GRPVIVDFYADWCENCKVMAPRMVALERQYAGRVEFVTIDGAssKNSDWVQRFKVDGIPHFAFISTdGQVLTALIGNIPSYAMKEEID 91 
                 689*************************************76448899*************999761555558888888877777775 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0     4e-12   7.8e-09       4     109 ..       3      87 ..       1      94 [. 0.87

  Alignments for each domain:
  == domain 1    score: 35.6 bits;  conditional E-value: 4e-12
   PF13098.1   4 ngkrvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpGylpaeele 109
                  g +viv+f +++C +Ck + + +    ++++ ++ ++e++ ++  +sk                  ++++ ++++v+g P + f++++G++++ l G +p   ++
  MMETSP1325-20131115|6967_1   3 SGRPVIVDFYADWCENCKVMAPRMV---ALERQYAGRVEFVTIDGASSK------------------NSDWVQRFKVDGIPHFAFISTDGQVLTALIGNIPSYAMK 87 
                 699*********************9...699999999999998888665..................46899*******************999988888876655 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0     2e-09     4e-06       1      45 [.       4      45 ..       4      54 .. 0.87
   2 !    8.3   0.0    0.0012       2.3      72      96 .]      49      73 ..      45      73 .. 0.84

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 2e-09
   PF13905.1  1 gkivllyfaaswcppckaftpelkelyeklkaskdkveivyVsld 45
                g++v+++f+a+wc++ck  +p++ +l++++     +ve+v +   
  MMETSP1325-20131115|6967_1  4 GRPVIVDFYADWCENCKVMAPRMVALERQYA---GRVEFVTIDGA 45
                689***************************9...9*****99765 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0012
   PF13905.1 72 rnklkklykvkaiPtlvvldkdgev 96
                ++   +++kv +iP++  +++dg+v
  MMETSP1325-20131115|6967_1 49 NSDWVQRFKVDGIPHFAFISTDGQV 73
                4556789****************97 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   7.8e-12   1.5e-08      15      81 ..       2      68 ..       1      69 [. 0.81

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 7.8e-12
   PF13899.1 15 eegkpllvifgadwcpdCqaldrd.vlsdeevkaalaekfvllrvdv...terdanleldrqgvPvvvfld 81
                ++g+p++v+f+adwc+ C++++   v+ +   ++ +a++++++ +d    +++d  ++++ +g+P+++f++
  MMETSP1325-20131115|6967_1  2 ASGRPVIVDFYADWCENCKVMAPRmVALE---RQ-YAGRVEFVTIDGassKNSDWVQRFKVDGIPHFAFIS 68
                689******************76626666...66.99**********55444444447777*******986 PP

>> PF13728.1  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.7e-07   0.00033     125     194 ..       9      71 ..       2      83 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 1.7e-07
   PF13728.1 125 fffyrsdcpycealapilqafaekygievlpVsvDGkglpelpnsrkdtgqaqklgvkttPalvlvdpkt 194
                 + fy   c+ c+ +ap + a++++y   v +V++DG+       s k+++ +q+++v  +P   +++++ 
  MMETSP1325-20131115|6967_1   9 VDFYADWCENCKVMAPRMVALERQYAGRVEFVTIDGA-------SSKNSDWVQRFKVDGIPHFAFISTDG 71 
                 569*********************************9.......67889999999999999999988776 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   8.9e-07    0.0017      27      96 ..       3      73 ..       2      88 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 8.9e-07
                TTSEEEEE---------IIIIIHHHHTHHHH.HH----EEEE...E-SS-HHHHHHHHHTT.TSEEE------ CS
   PF08534.5 27 kgkkvvlvfvpgafcptCsaehpyleklaklakekgvdvvav...vaqndafvkeawakeglkipvlsDesas 96
                 g++v++ f++  +c  C+  +p +  l++++ +  v++v +   +++n++ v+++  +  +++ ++s  ++ 
  MMETSP1325-20131115|6967_1  3 SGRPVIVDFYAD-WCENCKVMAPRMVALERQY-AGRVEFVTIdgaSSKNSDWVQRFKVDGIPHFAFISTDGQV 73
                599*********.***************9995.555***9999889999999****99988888887644444 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.3e-06    0.0025      24      71 ..       3      48 ..       1      80 [. 0.76

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.3e-06
  PF00578.16 24 kgkpvvLffypkdfcpvCttelpalaelyeefkkkgvevigvsvdspe 71
                +g+pv++ fy+  +c+ C+  +p++ +l  +++ + ve++ +   s +
  MMETSP1325-20131115|6967_1  3 SGRPVIVDFYAD-WCENCKVMAPRMVALERQYAGR-VEFVTIDGASSK 48
                699*********.**************99999854.666665554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 533.93
//
Query:       MMETSP1325-20131115|6968_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-19   68.8   0.0    3.9e-19   68.5   0.0    1.0  1  PF00650.15 CRAL/TRIO domain
  ------ inclusion threshold ------
      0.013   15.3   0.0      0.017   14.9   0.0    1.2  1  PF13716.1  Divergent CRAL/TRIO domain
      0.091   12.0   0.0       0.12   11.5   0.0    1.2  1  PF10003.4  Integral membrane protein (DUF2244)


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   0.0   8.6e-23   3.9e-19      69     156 ..       2      89 ..       2      90 .. 0.91

  Alignments for each domain:
  == domain 1    score: 68.5 bits;  conditional E-value: 8.6e-23
  PF00650.15  69 mkglslskmlwkpisllkkilkilqdnyPerlkkilivnaPklfkvafklvkpfldektreKikfvspsntpa...tlekyidpeqlpkel 156
                 m++++ ++ +   i+++k+++kil  +yP+rl+ ++i naP+lf++++ +++pfl e+tr+K+ fvs++ + +   +l+ +idp++l+++l
  MMETSP1325-20131115|6968_1   2 MTKWTRANSD---INTVKRLIKILVVHYPDRLGMAIIFNAPFLFSAVWAIISPFLEEVTRKKVLFVSNNRDGSvseQLTAVIDPKELEEDL 89 
                 5667767777...*****************************************************9987755899***********9876 PP

>> PF13716.1  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   3.7e-06     0.017      66     141 ..      11      90 ..       2     104 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.7e-06
   PF13716.1  66 slswlkklyktlprrykknlkkvylvhpstflksilstllslfvskkflrkkviy......isslseLseyiditqlkkslp 141
                 + + +k+l+k+l  +y+++l   +++++ + +  +   + s+f+ +   rkkv +       s  ++L+ +id+++l+++l 
  MMETSP1325-20131115|6968_1  11 DINTVKRLIKILVVHYPDRLGMAIIFNAPFLFSAVW-AIISPFLEEVT-RKKVLFvsnnrdGSVSEQLTAVIDPKELEEDLE 90 
                 566788888888888999998888888877777777.88899999999.***999444444344677899999999988886 PP

>> PF10003.4  Integral membrane protein (DUF2244)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.7e-05      0.12      22      70 ..      32      82 ..      29     112 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.7e-05
   PF10003.4 22 lsllialaflllgawpvlpFaglellalalafrlsarrardrEeit..ltp 70
                +++++ ++fl+  +w+++  ++ e++   + f  ++r+++  E++t  ++p
  MMETSP1325-20131115|6968_1 32 MAIIFNAPFLFSAVWAIISPFLEEVTRKKVLFVSNNRDGSVSEQLTavIDP 82
                66788899************************************9743555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.66
# Mc/sec: 424.81
//
Query:       MMETSP1325-20131115|6966_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       517  (0.0378145); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 616.21
//
Query:       MMETSP1325-20131115|6970_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-12   45.9   0.0      3e-12   45.8   0.0    1.0  1  PF03259.12 Roadblock/LC7 domain
  ------ inclusion threshold ------
      0.045   12.8   0.0      0.062   12.3   0.0    1.2  1  PF10748.4  Protein of unknown function (DUF2531)
       0.13   12.1   0.0       0.32   10.9   0.0    1.6  2  PF02553.10 Cobalt transport protein component CbiN


Domain annotation for each model (and alignments):
>> PF03259.12  Roadblock/LC7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   6.7e-16     3e-12       2      90 ..       9     100 ..       8     101 .. 0.97

  Alignments for each domain:
  == domain 1    score: 45.8 bits;  conditional E-value: 6.7e-16
  PF03259.12   2 aeellellqrvpgvrgalvvskdGlvlasstldnddadrlAalasgllaaakalarelg...egelkelliegkkgelyltpagegalLvvl 90 
                 ++e++++l+  +g ++  ++s+dG+v++++++++++a + A l+  l+a++k+ +rel    ++e++ l++++++ e ++++ g+++l v++
  MMETSP1325-20131115|6970_1   9 VDEVIRELKLNAGFTQYAIMSNDGIVIKCEGMERTKAIQHAHLVLDLCAKSKKYIRELFeppDNEVESLRLKTNEYEMIVAQHGNNTLVVIQ 100
                 799*******************************************************99*************************9999997 PP

>> PF10748.4  Protein of unknown function (DUF2531)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.4e-05     0.062       6      67 ..      51     113 ..      46     117 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.4e-05
   PF10748.4   6 lllllalllltgmRDPfkPpedrCriaeldkWrYqGlvkk.gervtgilkdeqkkWrRveqdd 67 
                 l+l l+       R+ f+Pp++  +  +l++  Y+ +v + g++  ++++d  +k + + +++
  MMETSP1325-20131115|6970_1  51 LVLDLCAKSKKYIRELFEPPDNEVESLRLKTNEYEMIVAQhGNNTLVVIQDTADKSHHAGEEE 113
                 6777888888899***********************9975378999******99988876655 PP

>> PF02553.10  Cobalt transport protein component CbiN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     7e-05      0.32      47      67 ..      57      77 ..      41      80 .. 0.83
   2 ?   -2.8   0.0       1.3   6.1e+03      18      32 ..      96     110 ..      93     117 .. 0.51

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 7e-05
  PF02553.10 47 peyepwfePlfEPpsGEiESl 67
                 + + + + lfEPp  E+ESl
  MMETSP1325-20131115|6970_1 57 AKSKKYIRELFEPPDNEVESL 77
                567888999***********8 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 1.3
  PF02553.10  18 llilaakvedegffG 32 
                 l++++ + ++  ++G
  MMETSP1325-20131115|6970_1  96 LVVIQDTADKSHHAG 110
                 444444444445555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 606.74
//
Query:       MMETSP1325-20131115|6971_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 552.20
//
Query:       MMETSP1325-20131115|6969_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 708.26
//
Query:       MMETSP1325-20131115|6972_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|6973_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 619.06
//
Query:       MMETSP1325-20131115|6974_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|6980_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-06   26.3   0.1    1.6e-06   26.2   0.0    1.0  1  PF10191.4 Golgi complex component 7 (COG7)
  ------ inclusion threshold ------
       0.11   11.7   0.0       0.18   11.0   0.0    1.3  1  PF11206.3 Protein of unknown function (DUF2988)


Domain annotation for each model (and alignments):
>> PF10191.4  Golgi complex component 7 (COG7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   2.4e-10   1.6e-06     620     652 ..       2      34 ..       1      49 [. 0.88

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 2.4e-10
   PF10191.4 620 PsfSlaPqeyvtsigqYlltLPqhLEPlllsed 652
                 P +S+ P e +t+ig+ ll+L q L+P++ s +
  MMETSP1325-20131115|6980_1   2 PLYSILPSEHITQIGEHLLSLYQALDPFAMSDA 34 
                 89***************************9983 PP

>> PF11206.3  Protein of unknown function (DUF2988)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.7e-05      0.18      10      20 ..      64      74 ..      59      76 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 2.7e-05
   PF11206.3 10 DFETaElSTlS 20
                D ETa+lSTlS
  MMETSP1325-20131115|6980_1 64 DGETAALSTLS 74
                77********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 433.19
//
Query:       MMETSP1325-20131115|6978_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.67
# Mc/sec: 786.86
//
Query:       MMETSP1325-20131115|6981_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.82
# Mc/sec: 347.76
//
Query:       MMETSP1325-20131115|6982_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.039   12.6   0.1      0.044   12.4   0.1    1.1  1  PF03308.11 ArgK protein


Domain annotation for each model (and alignments):
>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   3.2e-06     0.044     124     189 ..      16      85 ..      13      94 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.2e-06
                 EEEEE------HHHHHHTT-SS-EEEE-------------.-..-TTT-SEEEE--.--HHHHHHHHHHH CS
  PF03308.11 124 vilvetvGvGqsevdiievadtvvlvtlpgaGDelqaika.G..lleiaDilvvnk.aDkeeaekaarel 189
                 v+lv  vGv     ++++v d + +v+ pg GD++ +  a G   + +a + vv   +D+ e ++++r+l
  MMETSP1325-20131115|6982_1  16 VVLVASVGVVLRRAAVADVHDRIDVVLNPGLGDQVDVRPAeGpnHVSVARVAVVRWcSDPGELRHVSRML 85 
                 89*********************************98654232246666666665324566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 426.99
//
Query:       MMETSP1325-20131115|6983_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.62
# Mc/sec: 336.26
//
Query:       MMETSP1325-20131115|6985_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|6987_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.32   10.4   1.8        3.3    7.1   0.0    2.4  2  PF13696.1 Zinc knuckle


Domain annotation for each model (and alignments):
>> PF13696.1  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0   0.00024       3.3      19      27 ..      10      20 ..       7      27 .. 0.78
   2 ?    2.5   0.1    0.0067        91       4      12 ..      44      52 ..      42      55 .] 0.76

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00024
   PF13696.1 19 HyIsDCPq..a 27
                H+I+ CP   a
  MMETSP1325-20131115|6987_1 10 HLIKKCPEtnA 20
                *******8643 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.0067
   PF13696.1  4 apPpkYlCH 12
                a PpkY  H
  MMETSP1325-20131115|6987_1 44 AAPPKYREH 52
                579999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 244.07
//
Query:       MMETSP1325-20131115|6984_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-09   35.0   0.0    1.5e-08   34.0   0.0    1.5  1  PF01424.17 R3H domain
  ------ inclusion threshold ------
      0.025   13.6   1.7      0.033   13.2   1.2    1.1  1  PF10593.4  Z1 domain
       0.21   10.9  16.3        0.3   10.3  11.3    1.3  1  PF14153.1  Spore coat protein CotO
       0.24   10.1  10.5       0.31    9.7   7.3    1.1  1  PF04514.7  Bluetongue virus non-structural protein NS2
       0.38    8.6   9.9       0.44    8.4   6.9    1.0  1  PF07218.6  Rhoptry-associated protein 1 (RAP-1)
       0.48    9.4  19.8       0.67    8.9  13.7    1.1  1  PF09507.5  DNA polymerase subunit Cdc27
        1.1    8.9  14.2        2.3    7.9   9.8    1.5  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
        1.3    8.9  12.2        2.2    8.1   8.5    1.3  1  PF08432.5  Fungal protein of unknown function (DUF1742)
        1.8    8.2  13.7        2.7    7.7   9.5    1.3  1  PF06459.7  Ryanodine Receptor TM 4-6
        2.3    6.0  10.8        2.9    5.6   7.5    1.1  1  PF02724.9  CDC45-like protein
        2.4    5.6   7.3        2.7    5.4   5.0    1.0  1  PF05758.7  Ycf1
          3    5.8  13.3          4    5.4   9.2    1.1  1  PF08553.5  VID27 cytoplasmic protein
        3.3    6.5   9.8          5    5.9   6.8    1.2  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
        4.7    5.7  14.2        6.4    5.2   9.8    1.1  1  PF03985.8  Paf1
        5.3    5.6  12.5        7.2    5.2   8.7    1.2  1  PF07946.9  Protein of unknown function (DUF1682)


Domain annotation for each model (and alignments):
>> PF01424.17  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.6e-11   1.5e-08       4      54 ..     186     237 ..     183     238 .. 0.84

  Alignments for each domain:
  == domain 1    score: 34.0 bits;  conditional E-value: 1.6e-11
                 HHHHHHTSSEEEE-TT--CHHHHHHHHHHHH---EEEEE--.-..-EEEEE- CS
  PF01424.17   4 ladrvkstsksvflppmtseeRkliHelaeefgleseSeGe.gpkRrvvitk 54 
                 l+ +++s++  +    mts++R+l He+ae +gl+++S+G  g +Rr+v+tk
  MMETSP1325-20131115|6984_1 186 LRFIASSDNTITIGADMTSHQRQLGHEIAESYGLKHVSTGMpGINRRLVLTK 237
                 5556677777777778************************549******997 PP

>> PF10593.4  Z1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.2   3.7e-05     0.033      28     122 ..     106     204 ..      83     226 .. 0.60

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.7e-05
   PF10593.4  28 smLihvsrkvaehkqvaklieeylrslkkaveesskeeel....laelkelyekefervtesveetkeakpsfeeikeelekvieseikvvvvNssksk 122
                   +i +s ++++ ++ ++++++ + +   + +++ + + +     ++ +e  e+   + +e++ e++ ++++++ + +++ + i s+ +  ++ +++++
  MMETSP1325-20131115|6984_1 106 AEVIRQSLLTHQEEEANAKVKADAAEAVAKAKAEAEGQVKeeeeEEREEEEQEQGQAQEKEQAGEEEGEEEEWDRVHNQILRFIASSDNTITIGADMTS 204
                 44566777777777777777555444444444333333221111334444444444444444445999****************875555555545544 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3  11.3   0.00033       0.3      59     123 ..     110     174 ..      94     215 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00033
   PF14153.1  59 eekaeveseeeaeeaesedeqesseqeeiaqeveeeeeeeeekqeevekekeaekeeteleeekq 123
                 +++++  +eeea++ ++ d +e++ +++++ e + +eeeeee++ee++++ +a+++e + eee +
  MMETSP1325-20131115|6984_1 110 RQSLLTHQEEEANAKVKADAAEAVAKAKAEAEGQVKEEEEEEREEEEQEQGQAQEKEQAGEEEGE 174
                 45555666666666666666666666666666663333333333333344444444443333332 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   7.3   0.00034      0.31     197     273 ..     103     179 ..      74     196 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00034
   PF04514.7 197 deeakemtpetskqekeeerreavekrleerveklkldleekredlkkeqeeeekvet.esddedeegedseeeetks 273
                 de+a++ + +   +++eee++++v+   +e v k k + e++ ++ ++e++eee++e+ + +++++ ge+++eee  +
  MMETSP1325-20131115|6984_1 103 DEMAEV-IRQSLLTHQEEEANAKVKADAAEAVAKAKAEAEGQVKEEEEEEREEEEQEQgQAQEKEQAGEEEGEEEEWD 179
                 455544.44455566778888888999999999999999999888777666665555415666688888887777544 PP

>> PF07218.6  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   6.9   0.00048      0.44      93     279 ..       2     183 ..       1     209 [. 0.61

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00048
   PF07218.6  93 skkGsGksrvrsasaaaileeddskdd.lefkasqsvv.ktskpkststeslksssdskskasak.snvksaskyGesssseesatdsskasasvagivGadeeeppapkntltpleelyetnvnlfalkysleklekeidilkne.ydkvkekeekeldeemkkikedkkkelekil.kesdeekfkfdee 279
                 s++G G     s + + +   dds+ +  e++ + ++  +++  ++++t +  s+ +    + a+  ++ sas    ++ s + a +++  +a ++g v  de++    ++ lt  ee  +++v+  a         + +   k e   +vke+ee e +ee ++  + + k  e+ + +e++ee++    +
  MMETSP1325-20131115|6984_1   2 SSEGAGAGGGGSLAGSLVGTTDDSRLEaSELRQAVEISlQSAAASGSTTTASPSTPPPTPTTDAPaPASASASASTSAQGSAQGAAQTAGGAADLSGSVDPDEMAEVIRQSLLTHQEEEANAKVKADA--------AEAVAKAKAEaEGQVKEEEEEEREEEEQEQGQAQEK--EQAGeEEGEEEEWDRVHN 183
                 55666666666666667777888875514565555555344445554444444544444344444145677888788888888888888889999**********99999999999997765554333........233333444414578888888777766655444433..334403445554444333 PP

>> PF09507.5  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  13.7   0.00074      0.67     118     273 ..      25     177 ..      20     195 .. 0.46

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00074
   PF09507.5 118 skdsairgkqagpivnpevkrregvgssplaaeaskalkktangk.a...askpsksiaks.evksksakktqdssketktektekktsvkaasskkkaseksnamssffkkktkekkkkkeaseskvkeeseeesekedkaeedesaeslekeedekeke 273
                 s+ +a +  qa+ i+ +    +++ gs+ +a++++++ ++t+++  +   +++ s+s ++s + + + a  + d s +  +++    ++v  +s+ ++++e++na+   ++++++ +k+k+ea+ + vkee+eee e+e++++ +++++++  ee+ +e+e
  MMETSP1325-20131115|6984_1  25 SRLEASELRQAVEISLQS---AAASGSTTTASPSTPPPTPTTDAPaPasaSASASTSAQGSaQGAAQTAGGAADLSGSVDPDE---MAEVIRQSLLTHQEEEANAK-VKADAAEAVAKAKAEAEGQ-VKEEEEEEREEEEQEQGQAQEKEQAGEEEGEEEE 177
                 445555555555543333...32225566666666666666666644333333333333320223333333333333322222...34444444444444444444.4445555555666656666.4444455555555555555543333333333333 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   9.8    0.0026       2.3     121     198 ..     102     178 ..      87     183 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0026
   PF11705.3 121 PkeLwkvlgknkkakkkllalskfkkkadlkkfae...edeeeklsalekkekeldaedeeeedkkeeeeeeeeeeedddf 198
                 P+e+ +v++++  ++++ +a  k k  ad+++ ++   +++e + +++e  e+e ++e++e+++ +e+e+ +eee e++++
  MMETSP1325-20131115|6984_1 102 PDEMAEVIRQSLLTHQEEEANAKVK--ADAAEAVAkakAEAEGQVKEEE--EEEREEEEQEQGQAQEKEQAGEEEGEEEEW 178
                 8888888888876555444433333..3333322233233333333333..333345555555555554444444444444 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   8.5    0.0024       2.2      55     115 ..     117     177 ..     105     207 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0024
   PF08432.5  55 aeaeeakkkkkelkeeiekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekeke 115
                 +e+e+  k k + +e ++k k+e e + k  +e++ +++e+++ + ++k+++++++ +e+e
  MMETSP1325-20131115|6984_1 117 QEEEANAKVKADAAEAVAKAKAEAEGQVKEEEEEEREEEEQEQGQAQEKEQAGEEEGEEEE 177
                 2333333344455666666677666666655555444444444444444444433333332 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   9.5    0.0029       2.7      88     162 ..     104     185 ..      23     192 .. 0.45

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0029
   PF06459.7  88 k.......elkeeeeepkseaekadledgekeekaeeeseekpeeakaakkkaekkkekkaekeeaaeaei.fkeleiyrkki 162
                 +       +l  ++ee+ +   kad ++  +++kae+e + k+ee+++ ++ +e+++++++eke+a e e   +e +++ ++i
  MMETSP1325-20131115|6984_1 104 EmaevirqSLLTHQEEEANAKVKADAAEAVAKAKAEAEGQVKEEEEEEREE-EEQEQGQAQEKEQAGEEEGeEEEWDRVHNQI 185
                 022222222333333333333334433333333344443333322222221.1222222222222222111022334444444 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   7.5    0.0032       2.9     108     170 ..     118     180 ..     108     221 .. 0.58

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0032
   PF02724.9 108 eeelekeeeerdayealvemkeeee.eesdedsdseddeeeeessasekrksesdedeedddde 170
                 eee  + + + da+ea  + k e e + ++e++++ ++ee+e+ +a+ek+++ ++e ee++ d+
  MMETSP1325-20131115|6984_1 118 EEE-ANAKVKADAAEAVAKAKAEAEgQVKEEEEEEREEEEQEQGQAQEKEQAGEEEGEEEEWDR 180
                 222.223345677777766555555455666666666666666666665555554444444333 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   5.0     0.003       2.7     245     291 ..     128     175 ..      98     237 .. 0.49

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.003
   PF05758.7 245 eaesekkrakqeqeee.eeedsslaseekedkdkideqeekkveekke 291
                 +a+++ ++ak e e++ +ee+++  +ee++++ + +e+e+ ++ee +e
  MMETSP1325-20131115|6984_1 128 DAAEAVAKAKAEAEGQvKEEEEEEREEEEQEQGQAQEKEQAGEEEGEE 175
                 222222222222222211111111122222222222222221111111 PP

>> PF08553.5  VID27 cytoplasmic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   9.2    0.0043         4     353     428 ..     114     183 ..     101     204 .. 0.51

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0043
   PF08553.5 353 wetlnkekwakvkeeekdYildafealeiedeeeee.eaeeeeeeeeeeeedeeegeskeevddeeyeeedveskee 428
                   ++++e  akvk++  + + +a  +        e   +eeeeee+eeee++++++++ke+  +ee eee+ ++ ++
  MMETSP1325-20131115|6984_1 114 LTHQEEEANAKVKADAAEAVAKAKAE-------AEGqVKEEEEEEREEEEQEQGQAQEKEQAGEEEGEEEEWDRVHN 183
                 44444444555544444444443333.......22213444445555555555555666666666655555544433 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   6.8    0.0054         5      25      80 ..     123     179 ..     108     200 .. 0.66

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0054
  PF03896.11  25 vkklaasaqdltedeeaeddvvdedeedeaeveedekteaeeeedee.eagevkasp 80 
                  k +a++a+ ++++++ ++ +v+e+ee+e e+ee+e+ +a+e+e+   e+ge ++  
  MMETSP1325-20131115|6984_1 123 AKVKADAAEAVAKAKAEAEGQVKEEEEEEREEEEQEQGQAQEKEQAGeEEGEEEEWD 179
                 344455556666666666888888888888888888888887777663445554444 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   9.8    0.0071       6.4     354     407 ..     123     176 ..     100     199 .. 0.42

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0071
   PF03985.8 354 eekerdklrakfdpiefeevdedeeeeeeqrseeeeeeeeedeeeeeseeeeel 407
                  + + d+++a  +   ++e + +eeeeee ++ee+e+ + +++e+ ++ee ee+
  MMETSP1325-20131115|6984_1 123 AKVKADAAEAVAKAKAEAEGQVKEEEEEEREEEEQEQGQAQEKEQAGEEEGEEE 176
                 222222222222222222222222222222222222222222222222222222 PP

>> PF07946.9  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   8.7    0.0079       7.2     248     301 ..     121     174 ..      94     184 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0079
   PF07946.9 248 kklelreevlkkvkklReevekkllkakeeerqEeaqekkeekkkeereaklak 301
                 ++++++ ++ + v k+ +e+e +++ ++eeer+Ee+qe+ ++++ke+  +++ +
  MMETSP1325-20131115|6984_1 121 ANAKVKADAAEAVAKAKAEAEGQVKEEEEEEREEEEQEQGQAQEKEQAGEEEGE 174
                 377888999999999999999999999999999999888888888776664444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1836  (0.134289); expected 273.4 (0.02)
Passed bias filter:                      702  (0.0513458); expected 273.4 (0.02)
Passed Vit filter:                       170  (0.0124342); expected 13.7 (0.001)
Passed Fwd filter:                        36  (0.00263312); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.14u 0.43s 00:00:01.56 Elapsed: 00:00:00.69
# Mc/sec: 962.02
//
Query:       MMETSP1325-20131115|6990_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
       0.01   15.6   0.0      0.015   15.1   0.0    1.3  1  PF11731.3 Pathogenicity locus


Domain annotation for each model (and alignments):
>> PF11731.3  Pathogenicity locus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.1e-06     0.015      10      45 ..     126     161 ..      92     172 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.1e-06
   PF11731.3  10 alaelqdlpniGkavakdlvllGiesveelkgedpe 45 
                 +  +l+ + +iG+ +++ l+ +Gi+s e+++   p+
  MMETSP1325-20131115|6990_1 126 RQDNLTAVKGIGPFIQERLHAIGIQSFEQIAAMTPA 161
                 6789**************************998885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 992.09
//
Query:       MMETSP1325-20131115|6991_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-07   30.3   5.8     0.0034   17.0   0.0    3.7  4  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.1   2.9e-06     0.039       9      29 ..       4      24 ..       1      25 [. 0.94
   2 !   17.0   0.0   2.5e-07    0.0034       6      32 ..      52      78 ..      47      80 .. 0.89
   3 ?   -0.1   0.3     0.064   8.7e+02      12      28 ..      91     107 ..      81     128 .. 0.64
   4 ?   -2.2   0.0       0.3   4.1e+03      23      35 ..     157     169 ..     146     171 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.9e-06
                SSSSSEEEEEEESSSTEEEEE CS
  PF00400.27  9 gHtspVtcvafspdgpllasg 29
                +Ht+ Vtc+a +p+++l+a+g
  MMETSP1325-20131115|6991_1  4 EHTDEVTCLAKHPSRTLVATG 24
                7*******************8 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 2.5e-07
                EEESSSSSEEEEEEESSSTEEEEEETT CS
  PF00400.27  6 tlrgHtspVtcvafspdgpllasgSrD 32
                +   H  +V+c+af+ +g++l+s + D
  MMETSP1325-20131115|6991_1 52 ITGVHRRAVSCMAFDESGKFLVSVGTD 78
                5677*********************99 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.064
                 SSEEEEEEESSSTEEEE CS
  PF00400.27  12 spVtcvafspdgpllas 28 
                  +V+c a s + + l+ 
  MMETSP1325-20131115|6991_1  91 QTVRCSATSCSEKTLCV 107
                 55565555555444444 PP

  == domain 4    score: -2.2 bits;  conditional E-value: 0.3
                 STEEEEEETTSEE CS
  PF00400.27  23 gpllasgSrDgti 35 
                 g++ + g  Dg +
  MMETSP1325-20131115|6991_1 157 GNRTVVGTQDGHL 169
                 5555666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 786.73
//
Query:       MMETSP1325-20131115|6988_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-53  179.0   0.4    4.6e-53  178.8   0.3    1.1  1  PF00071.17 Ras family
    3.8e-17   62.7   0.0    6.2e-17   62.0   0.0    1.3  1  PF08477.8  Miro-like protein
    7.6e-17   60.9   0.0    9.8e-17   60.6   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    5.1e-06   25.6   0.1    6.5e-06   25.3   0.0    1.2  1  PF04670.7  Gtr1/RagA G protein conserved region
    1.4e-05   24.4   0.2    3.5e-05   23.2   0.1    1.7  1  PF00009.22 Elongation factor Tu GTP binding domain
    7.2e-05   21.9   0.1    0.00011   21.3   0.1    1.4  1  PF09439.5  Signal recognition particle receptor beta subunit
     0.0017   18.1   0.0     0.0037   17.1   0.0    1.5  1  PF01926.18 50S ribosome-binding GTPase
     0.0036   16.6   2.9      0.026   13.8   0.1    2.5  3  PF00448.17 SRP54-type protein, GTPase domain
     0.0045   17.2   0.1     0.0074   16.5   0.1    1.7  1  PF13191.1  AAA ATPase domain
     0.0048   16.4   0.0     0.0093   15.4   0.0    1.4  1  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
  ------ inclusion threshold ------
       0.01   14.9   0.4        0.1   11.6   0.0    2.0  2  PF02421.13 Ferrous iron transport protein B
      0.033   14.4   0.0      0.047   13.8   0.0    1.2  1  PF03464.10 eRF1 domain 2
       0.07   12.6   0.5       0.14   11.6   0.3    1.4  1  PF05729.7  NACHT domain
       0.11   12.1   0.3        0.2   11.2   0.2    1.7  1  PF07728.9  AAA domain (dynein-related subfamily)
       0.13   11.7   0.1       0.25   10.7   0.0    1.5  1  PF13479.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.8   0.3     5e-56   4.6e-53       1     161 [.      16     177 ..      16     178 .. 0.97

  Alignments for each domain:
  == domain 1    score: 178.8 bits;  conditional E-value: 5e-56
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEET.TEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST.TTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievd.gkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae.envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 K+vl+Gd++vGKt+l+lrf+e++F+++++sTig+ f+tk++++  g+ +k++iwDTAGqe+f++++++yyr+a ++++++dit++ sf+++k+wvee+++ ++ +++++++  nK+Dl + r+vs++++e++a+++++  ++tSAk+n +v+e+f++++++++
  MMETSP1325-20131115|6988_1  16 KVVLLGDKGVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLGdGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEGSFNTMKEWVEELRHNVQdKELVLAIACNKADLPN-RVVSRQRAEAFASSINAIIIDTSAKDNFGVNELFQKVTETVI 177
                 9*****************************************965899***************************************************99998889************7.*************************************99875 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.0   6.8e-20   6.2e-17       1     119 []      16     132 ..      16     132 .. 0.84

  Alignments for each domain:
  == domain 1    score: 62.0 bits;  conditional E-value: 6.8e-20
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavk.tlevdvdtel..lelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 kvv++GdkgvGK+ l+ ++++++f     +++ ++ +     ++++ +d++   +++wd++g+e++ ++ ++  ++a+a+++ +d+tde s+++ +e +++l++  + +k++++ +  nk D
  MMETSP1325-20131115|6988_1  16 KVVLLGDKGVGKTCLVLRFIEGTFT----QKQQSTIGAFFLtKKVQLGDGSMckIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEGSFNTMKEWVEELRHNVQ-DKELVLAIACNKAD 132
                 8************************....4444444444440455555555589**************99999*********************9999999998885.88899999999987 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.0   1.1e-19   9.8e-17      13     174 ..      13     175 ..       7     176 .. 0.89

  Alignments for each domain:
  == domain 1    score: 60.6 bits;  conditional E-value: 1.1e-19
                 SEEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE...TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHHHHHHHH CS
  PF00025.16  13 kelrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei...knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                  e++++llG  + GKt ++ ++ ++ +++ ++ Tig  f +++++       k+++wD  Gqe+ R +   Y+++  a i + D +d+  ++++ke +++l ++ + ke +l + +NK Dlp+ + +++ +e+ +     ++ +  i+ +sa  + g++e +++++e+
  MMETSP1325-20131115|6988_1  13 VEFKVVLLGDKGVGKTCLVLRFIEGTFTQkQQSTIGafFLTKKVQLgdgSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEGSFNTMKEWVEELRHNVQDKELVLAIACNKADLPNRVVSRQRAEAFA-----SSINAIIIDTSAKDNFGVNELFQKVTET 175
                 689*******************9999877478999966788999995555689**********************************************************************999998887765.....3455789999999999999999998876 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   7.2e-09   6.5e-06       1     138 [.      16     151 ..      16     177 .. 0.72

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 7.2e-09
   PF04670.7   1 klLLmGksgsGKtSmrsi.iFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspeak..vfvlihKmDlis...edereeifeerke 138
                 k++L+G +g GKt++    i   + +++  ++ga    ++ ++   ++ k+++wD+ Gqe+f +      +   ++n  + i  fDi+  + e ++++++e +e l+++ ++ +  + +  +K+Dl +    ++r e+f++  +
  MMETSP1325-20131115|6988_1  16 KVVLLGDKGVGKTCLVLRfIEGTFTQKQQSTIGAFFLTKKVQLGDGSMCKIQIWDTAGQERFRAM-----APMYYRNAAAAIVCFDIT--D-EGSFNTMKEWVEELRHNVQDKElvLAIACNKADLPNrvvSRQRAEAFASSIN 151
                 89************865414445566677777777777777777778899*********999888.....5899**************..4.6778888888888887765544115566688887543335566666655443 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.1   3.9e-08   3.5e-05      60     185 ..      55     175 ..      14     178 .. 0.77

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 3.9e-08
                 EEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.....S-HHHHHHHHHHHHTT--EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHHH CS
  PF00009.22  60 aisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqTeevlrlakklgvkiivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaivel 185
                  ++l  +++  +i++ Dt G + F ++     r + +a++ +d ++      +++  ee+ + +++ ++ + +++NK D+++  + ++  e+    +         ++ ++ +Sa++++g+++L++ ++e+
  MMETSP1325-20131115|6988_1  55 KVQLG-DGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEgsfntMKEWVEELRHNVQDKELVLAIACNKADLPNRVVSRQRAEAFASSI---------NAIIIDTSAKDNFGVNELFQKVTET 175
                 33444.88899*********************************998455544444444444555555558899*******9999888888774442.........3459999***********9999875 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   1.2e-07   0.00011       5     145 ..      16     154 ..      12     185 .. 0.72

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 1.2e-07
                 EEEEE--TT---HHHHHHHHHSS-------S..S-EEETT-...---..--EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT---HHHHHHHHHHHHHHHH CS
   PF09439.5   5 avllvGlsdsGKTslftrLttdsvkktvtSq..essaalkvksekgk..kltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflakspklikdaLEkElnkii 145
                 +v+l+G +  GKT l  r  ++++++ + S   +  +++kv+  +g+  k+++ D  G+e++r     +  +++ + ++v   D t d+   +++ E++ e+  +++   +++ + iACnK +l      +   +a  + +n ii
  MMETSP1325-20131115|6988_1  16 KVVLLGDKGVGKTCLVLRFIEGTFTQKQQSTigAFFLTKKVQLGDGSmcKIQIWDTAGQERFRAMAPMY--YRNAAAAIV-CFDIT-DEGSFNTMKEWVEELRHNVQ--DKELVLAIACNKADLPNRVVSRQRAEAFASSINAII 154
                 799*********************999999954445577787666661156789*********866555..666666655.55655.67778888888877655554..5567799*******9765555555666666666654 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.1e-06    0.0037       1     109 [.      16     123 ..      16     137 .. 0.62

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 4.1e-06
                 EEEEE--TT---HHHHHHHHC.....STCTEETS-TT-SSSESEEEEETTE...EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEE.TTSHHHHHHHHHHHHHH...TCCCEE CS
  PF01926.18   1 evaivGrpNvGKStLinaLtg.....ekaakvsdypgtTrditenevkkek...iilvDtPGiiegasedkeiegikkylekv.eradvlllvvd.asavlkeadkellnele...akkpli 109
                 +v+++G   vGK+ L+ + ++     ++++ ++++ + T++++ +         i+++Dt+G           e+++ +     ++a ++++++d +++   ++ ke ++el+   ++k+l+
  MMETSP1325-20131115|6988_1  16 KVVLLGDKGVGKTCLVLRFIEgtftqKQQSTIGAF-FLTKKVQLGDG---SmckIQIWDTAGQ----------ERFRAMAPMYyRNAAAAIVCFDiTDEGSFNTMKEWVEELRhnvQDKELV 123
                 699****************9523321223333333.66666655432...134478******2..........2455555555599999999999444433334455555553333344444 PP

>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.2     0.083        76       3      20 ..      16      33 ..      14      54 .. 0.76
   2 ?   -1.5   0.0       1.4   1.3e+03      71      95 ..      51      75 ..      34      80 .. 0.69
   3 !   13.8   0.1   2.9e-05     0.026      29      95 ..      87     161 ..      78     181 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.083
                EEEEE-------TTTHHH CS
  PF00448.17  3 villvGlqGaGKTTtlaK 20
                 ++l+G +G+GKT  + +
  MMETSP1325-20131115|6988_1 16 KVVLLGDKGVGKTCLVLR 33
                5789*********87655 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1.4
                HHHHHHHHHHHTT-SEEEEE----G CS
  PF00448.17 71 vakeavekakeekidvvlvDTaGrl 95
                ++ ++v+  + + + + + DTaG+ 
  MMETSP1325-20131115|6988_1 51 FLTKKVQLGDGSMCKIQIWDTAGQE 75
                4556666667777888899999975 PP

  == domain 3    score: 13.8 bits;  conditional E-value: 2.9e-05
                 ---EEEEE--TSSHHHHHHHHHHHHHTT-EEEE........-SS--EHHHHHHHHHHHHHHTT-SEEEEE----G CS
  PF00448.17  29 gkkvllvaaDtfRaaAveQLktlaeklgvpvik........ekeekdpaavakeavekakeekidvvlvDTaGrl 95 
                 +   ++v+ D+   + ++ +k ++e+l+ +v +         ++++ p  v++++ ++a +++i+++++DT+ + 
  MMETSP1325-20131115|6988_1  87 NAAAAIVCFDITDEGSFNTMKEWVEELRHNVQDkelvlaiaCNKADLPNRVVSRQRAEAFASSINAIIIDTSAKD 161
                 56789**********************99887788888887677789************************9765 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   8.1e-06    0.0074      24      66 ..      12      64 ..       2     214 .. 0.83

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 8.1e-06
   PF13191.1 24 p..l.llvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn.......l 66
                +  + ++++G++G+GK+ L+ ++++  + ++ + + g f++ +         +
  MMETSP1325-20131115|6988_1 12 SveFkVVLLGDKGVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVqlgdgsmC 64
                3563389***************9999999999999998887777655555551 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0     1e-05    0.0093      18     113 ..      17     126 ..      12     133 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1e-05
  PF02367.12  18 vlLsGdlGaGKTtlvkglakgl.gvkgevtSPtftlvevyeegklklyHlDlYRledkeelell............gildealedsvivv.EWserlkeelpekrlevel 113
                 v+L Gd G GKT+lv  +++g   +k++ t  +f l +  + g   ++ + ++  + +e ++ +              +d++ e s   + EW e+l++ + +k+l + +
  MMETSP1325-20131115|6988_1  17 VVLLGDKGVGKTCLVLRFIEGTfTQKQQSTIGAFFLTKKVQLGDGSMCKIQIWDTAGQERFRAMapmyyrnaaaaiVCFDITDEGSFNTMkEWVEELRHNVQDKELVLAI 126
                 7899***********99999985777799999**********************99999999997666666666554455555544433336777777666666666655 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.17   1.5e+02       2      17 ..      16      31 ..      15      42 .. 0.87
   2 ?   11.6   0.0   0.00011       0.1     103     165 ..     119     181 ..     112     194 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.17
                EEEEE--TT---HHHH CS
  PF02421.13  2 tvalvGnpnvGKttlf 17
                +v+l+G+  vGKt l+
  MMETSP1325-20131115|6988_1 16 KVVLLGDKGVGKTCLV 31
                799**********996 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00011
                 HTT-SEEEEEETHHHHHC---EB-HHHHHHH----EEEEBCCGTB--HHHHHHHHHHCTCG-X CS
  PF02421.13 103 elgvpvvvalnmiDeaekkgikidlkkLselLgvpvvktvarkkkgieelleaiievaekeek 165
                 + ++ + +a n+ D  ++   +  +++++++++  ++ t+a+++ g++el+++++e++ +++ 
  MMETSP1325-20131115|6988_1 119 DKELVLAIACNKADLPNRVVSRQRAEAFASSINAIIIDTSAKDNFGVNELFQKVTETVIDRKG 181
                 55666789999999999999999*******************************988766554 PP

>> PF03464.10  eRF1 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   5.2e-05     0.047      16     130 ..      65     175 ..      56     178 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.2e-05
                 EE-SS-EEEEEEEE-G.GG-S----HHHHHH....HHHHHHHHHHHHHHHHH...HTTT-SEEEEEE---HHHHHHHHHHHHHHHHTCCCEEEEE-SSSSGGGHHHHHHSTHHHHH CS
  PF03464.10  16 llkgsgieilekievslPkKhgrGgqsarrfe.reekreeflkkvaeaakeaFivdkdkvkgiilaGpGfaKeellesllldaelkkkkvivlvdvsyggeaGlnevlekpavakv 130
                  ++ + +   e++++  P  +++     + f+  +e   + +k+ +e++  +  v+ +++   i +  +++ ++++    ++a   + ++ +++d+s  ++ G+ne+ +k  v+++
  MMETSP1325-20131115|6988_1  65 KIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDiTDEGSFNTMKEWVEELRHN--VQDKELVLAIACNKADLPNRVVSRQRAEAFASS-INAIIIDTSAKDNFGVNELFQK--VTET 175
                 5555666666677777777777777777788888899999999999999999..999999999999999999999999999999888.9999***************999..6554 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   0.00015      0.14       3      31 ..      17      45 ..      16      60 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00015
   PF05729.7  3 vilqGeaGsGKTtLlqklasawakgklpq 31
                v+l G++G+GKT L+ ++++   ++k+++
  MMETSP1325-20131115|6988_1 17 VVLLGDKGVGKTCLVLRFIEGTFTQKQQS 45
                799***************99888877666 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   0.00022       0.2       2      24 ..      17      40 ..      16     173 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00022
                EEEE------HHHHHHHGGGGB.S CS
   PF07728.9  2 vlLvGppGtgKselaerlaeal.n 24
                v+L+G++G+gK+ l+ r+ e + +
  MMETSP1325-20131115|6988_1 17 VVLLGDKGVGKTCLVLRFIEGTfT 40
                89*************999876652 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00027      0.25       4      23 ..      15      34 ..      12      40 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00027
   PF13479.1  4 ikvliYGkpGiGKTslaktl 23
                +kv+++G+ G+GKT l+ ++
  MMETSP1325-20131115|6988_1 15 FKVVLLGDKGVGKTCLVLRF 34
                79************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.64u 0.33s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 1286.74
//
Query:       MMETSP1325-20131115|6993_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 404.39
//
Query:       MMETSP1325-20131115|6989_1  [L=423]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      408  (0.029842); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.62
# Mc/sec: 1634.93
//
Query:       MMETSP1325-20131115|6996_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-13   48.7   0.3    8.9e-07   28.6   0.0    1.6  2  PF13424.1  Tetratricopeptide repeat
    6.4e-10   38.4   0.4    3.8e-08   32.8   0.0    2.6  3  PF13374.1  Tetratricopeptide repeat
     0.0041   16.7   0.0      0.035   13.7   0.0    2.1  2  PF13176.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.011   16.2   0.4       0.32   11.6   0.1    2.2  2  PF13428.1  Tetratricopeptide repeat
      0.014   15.1   0.2      0.076   12.8   0.0    2.0  2  PF07719.12 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.1     1e-08   2.7e-05      32      78 .]       2      49 ..       1      49 [. 0.93
   2 !   28.6   0.0   3.2e-10   8.9e-07       1      65 [.      13      78 ..      13      80 .] 0.93

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 1e-08
   PF13424.1 32 lel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78
                le  ++ lg+ hp t+  + nl+ l++  gd++ A e+++++++ +++
  MMETSP1325-20131115|6996_1  2 LEAnRKALGNKHPSTLIDMINLGGLLENTGDLAGAAELYRECVAGRRA 49
                66768999**********************************999875 PP

  == domain 2    score: 28.6 bits;  conditional E-value: 3.2e-10
   PF13424.1  1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeA 65
                hp++ + + nl+++l+  gd+  A ely+++++  ++++g+ h  t++  + l +++ +lgd + A
  MMETSP1325-20131115|6996_1 13 HPSTLIDMINLGGLLENTGDLAGAAELYRECVAGrRAVFGPSHQKTLSGARFLRRVLKKLGDDEGA 78
                677777788*************************999*************************9988 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.026        71      28      41 ..       1      14 [.       1      15 [. 0.91
   2 !   32.8   0.0   1.4e-11   3.8e-08       5      41 ..      20      56 ..      16      57 .. 0.95
   3 ?   -1.6   0.0      0.94   2.6e+03      12      39 ..      69      75 ..      63      79 .. 0.55

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.026
   PF13374.1 28 alairrrllGddHP 41
                +l+  r+ lG  HP
  MMETSP1325-20131115|6996_1  1 VLEANRKALGNKHP 14
                79999********9 PP

  == domain 2    score: 32.8 bits;  conditional E-value: 1.4e-11
   PF13374.1  5 lnnLAlalrargryeeAlaleeealairrrllGddHP 41
                + nL+ +l ++g+++ A +l++e++a rr+++G+ H 
  MMETSP1325-20131115|6996_1 20 MINLGGLLENTGDLAGAAELYRECVAGRRAVFGPSHQ 56
                78*********************************95 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.94
   PF13374.1 12 lrargryeeAlaleeealairrrllGdd 39
                l +                     lGdd
  MMETSP1325-20131115|6996_1 69 LKK---------------------LGDD 75
                333.....................3554 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.3e-05     0.035       3      34 ..      21      52 ..      20      54 .. 0.88
   2 ?    0.7   0.0      0.19   5.2e+02       6      19 ..      66      79 ..      62      80 .] 0.61

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.3e-05
   PF13176.1  3 lnLarlysrlgdyekAielyeraLaltkdpld 34
                 nL+ l ++ gd   A+ely+++ a +++ ++
  MMETSP1325-20131115|6996_1 21 INLGGLLENTGDLAGAAELYRECVAGRRAVFG 52
                59********************9888887766 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.19
   PF13176.1  6 arlysrlgdyekAi 19
                 r+  +lgd e A+
  MMETSP1325-20131115|6996_1 66 RRVLKKLGDDEGAA 79
                45556677777665 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00012      0.32       7      29 ..      23      45 ..      18      59 .. 0.90
   2 ?    3.2   0.0      0.06   1.6e+02      21      37 ..      62      78 ..      55      80 .] 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00012
   PF13428.1  7 larallalGdpdeAiallrrala 29
                l+ +l++ Gd+++A++l+r+ +a
  MMETSP1325-20131115|6996_1 23 LGGLLENTGDLAGAAELYRECVA 45
                8899****************987 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.06
   PF13428.1 21 iallrralalaPddaea 37
                ++ lrr+l++  dd+ a
  MMETSP1325-20131115|6996_1 62 ARFLRRVLKKLGDDEGA 78
                67899999998888765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.8e-05     0.076       5      28 ..      21      44 ..      19      45 .. 0.92
   2 ?   -0.2   0.0      0.41   1.1e+03      10      21 ..      68      79 ..      67      80 .] 0.80

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.8e-05
                HHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12  5 ynlGlayyklgdyeeAleafekAl 28
                 nlG ++++ gd++ A+e++++++
  MMETSP1325-20131115|6996_1 21 INLGGLLENTGDLAGAAELYRECV 44
                699******************987 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.41
                HHHHTT-HHHHH CS
  PF07719.12 10 ayyklgdyeeAl 21
                ++ klgd e A+
  MMETSP1325-20131115|6996_1 68 VLKKLGDDEGAA 79
                678999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.33s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 435.70
//
Query:       MMETSP1325-20131115|6997_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0092   16.1   5.6      0.011   15.8   3.9    1.2  1  PF05306.6  Protein of unknown function (DUF733)
  ------ inclusion threshold ------
       0.17   11.7  10.0       0.19   11.6   7.0    1.1  1  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
        0.2    9.3   2.9       0.21    9.2   2.0    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
       0.27   10.9  11.4       0.34   10.6   7.9    1.1  1  PF09428.5  Fungal protein of unknown function (DUF2011)
       0.31    9.8   8.1       0.35    9.6   5.6    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.41   10.0   5.8       0.53    9.6   4.0    1.3  1  PF03064.11 HSV U79 / HCMV P34
       0.55    9.7   5.0       0.67    9.4   3.4    1.1  1  PF10828.3  Protein of unknown function (DUF2570)
       0.68    8.1   4.2       0.77    7.9   2.9    1.0  1  PF03961.8  Protein of unknown function (DUF342)
       0.88    8.0   4.6       0.96    7.9   3.2    1.0  1  PF04636.8  PA26 p53-induced protein (sestrin)
        1.1    7.8   7.6        1.3    7.7   5.2    1.0  1  PF04514.7  Bluetongue virus non-structural protein NS2
        1.5    8.6  11.1        1.8    8.4   7.7    1.1  1  PF11208.3  Protein of unknown function (DUF2992)
        2.1    8.2   5.7        3.9    7.3   3.8    1.5  2  PF09871.4  Uncharacterized protein conserved in archaea (DUF2098)
        2.8    5.8  12.6          3    5.7   8.7    1.0  1  PF03154.10 Atrophin-1 family
        2.9    7.5  11.1        3.5    7.3   7.7    1.1  1  PF14235.1  Domain of unknown function (DUF4337)
          3    5.9   7.5        3.4    5.7   5.2    1.0  1  PF06375.6  Bovine leukaemia virus receptor (BLVR)
        3.1    5.5   9.6        3.4    5.4   6.7    1.0  1  PF02724.9  CDC45-like protein
        3.2    7.6   7.8        1.9    8.3   0.6    2.1  2  PF02284.11 Cytochrome c oxidase subunit Va
        3.4    6.9   5.5        3.8    6.7   3.8    1.0  1  PF03839.11 Translocation protein Sec62
        3.4    6.6   6.3        3.4    6.6   4.3    1.1  1  PF07222.7  Proacrosin binding protein sp32
        3.4    6.3   6.4        3.7    6.2   4.4    1.0  1  PF04111.7  Autophagy protein Apg6
        5.5    5.0  10.4        6.2    4.8   7.2    1.0  1  PF05262.6  Borrelia P83/100 protein
        5.5    6.6   6.6        6.2    6.4   4.6    1.0  1  PF02862.12 DDHD domain


Domain annotation for each model (and alignments):
>> PF05306.6  Protein of unknown function (DUF733)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   3.9   1.8e-05     0.011      48      84 ..      32      68 ..      10      73 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.8e-05
   PF05306.6 48 lsvdelkalsrElsyrkeLrkklkrlkrrtlisskkk 84
                  ++++ +l++++ yr+eLr++++  k+++  +++k+
  MMETSP1325-20131115|6997_1 32 EHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKD 68
                34566677****************7776666555544 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   7.0   0.00031      0.19      48      90 ..      31      73 ..      11      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00031
   PF13094.1 48 eeirreeaelekdeekleeLeknakalererkeesknlhpvlq 90
                +e+++ ea l++ + + eeL+++ +++++er++++++ ++  +
  MMETSP1325-20131115|6997_1 31 AEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDR 73
                89**********************************9665555 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.0   0.00034      0.21      66     126 ..      13      72 ..       2      91 .. 0.54

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00034
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX... CS
  PF01496.14  66 skevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrels 126
                 s ev d+++++++   e  e  +++ +L+++++  eelr +++e+ke+  ++k e+ +e+ 
  MMETSP1325-20131115|6997_1  13 SAEVMDVARRASRRRDENAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQK-EKDEEFD 72 
                 45555666666666666666666666666666666666666666665555543.2222222 PP

>> PF09428.5  Fungal protein of unknown function (DUF2011)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   7.9   0.00054      0.34      55     128 ..       8      76 ..       2      79 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00054
   PF09428.5  55 pgcelpwrVidlkkknakvekeklkeeekkkkkkrpGKKrRialrkrakrtkeeaekekrkrknrekklkrRqk 128
                  g +l+  V+d+ +++++ + e     ++++ k+ +  K+ ia r+   r+ ee+++e+r +k++ + + rR +
  MMETSP1325-20131115|6997_1   8 TGAALSAEVMDVARRASRRRDE-----NAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDRRYE 76 
                 4778888899997776666555.....345666777779********************************965 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   5.6   0.00056      0.35      54     113 ..      22      82 ..       4      89 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00056
   PF10186.4  54 kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.asaql 113
                 ++ + ++ ++e+a+ +++++q  +  e+l++++e+k+e+++++ke+ ++  ++ e a+a++
  MMETSP1325-20131115|6997_1  22 RASRRRDENAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDRRYEqAYANV 82 
                 556667778888888888888888889****************999888887777666554 PP

>> PF03064.11  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   4.0   0.00085      0.53     143     194 ..      24      76 ..       5      99 .. 0.46

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00085
  PF03064.11 143 dvklaevaekvcralsrkks....dderkkksakqkekRrdedskkkkedrkkkqe 194
                 + +  e ae  ++ +++k++    ++ r++  +k++e+Rr++   +k+e+ +++ e
  MMETSP1325-20131115|6997_1  24 SRRRDENAEHAKNEAKLKQQiayrEELRRQMEEKKEERRRQK---EKDEEFDRRYE 76 
                 233333333333333333333332333333333334444444...33333333333 PP

>> PF10828.3  Protein of unknown function (DUF2570)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.4    0.0011      0.67      31      85 ..      30      84 ..       9      86 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0011
   PF10828.3 31 kaenkaqaqtieqqekankrLseaLeqErqAVekqqkianelkrkveenaeevkt 85
                +ae ++++  ++qq +  ++L  ++e  ++    q+++ +e+ r+ e++  +v t
  MMETSP1325-20131115|6997_1 30 NAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDRRYEQAYANVAT 84
                78889999999*999********************************99888865 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   2.9    0.0012      0.77     346     413 ..      12      79 ..       6      90 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0012
   PF03961.8 346 leeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeeleskkkeak 413
                 l +e++++ ++ ++ ++++ae + ++ k +q+  ++e++ + +ee +e ++++ke +ee+++++++a 
  MMETSP1325-20131115|6997_1  12 LSAEVMDVARRASRRRDENAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDRRYEQAY 79 
                 677899999999999999999999999**********************************9977663 PP

>> PF04636.8  PA26 p53-induced protein (sestrin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.2    0.0016      0.96     195     265 ..      12      83 ..       2      91 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0016
   PF04636.8 195 ltqeeidlenandlenseavesalkrkvadra.tevealmermkkleekredeeasqeelttrfekekkesl 265
                 l+ e +d+++ +++++ e++e+a+++++ +++    e+l  +m + +e+r++++ + ee   r+e+   + +
  MMETSP1325-20131115|6997_1  12 LSAEVMDVARRASRRRDENAEHAKNEAKLKQQiAYREELRRQMEEKKEERRRQKEKDEEFDRRYEQAYANVA 83 
                 555666777777776666666665555544444899*****************************9877665 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.2    0.0021       1.3     205     263 ..      14      72 ..       2      88 .. 0.43

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0021
   PF04514.7 205 petskqekeeerreavekrleerveklkldleekredlkkeqeeeekvetesddedeeg 263
                  e+  + ++++rr + + ++++++ klk ++  ++e  ++ +e++e+ ++++++++e +
  MMETSP1325-20131115|6997_1  14 AEVMDVARRASRRRDENAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFD 72 
                 33344444444444444444444444444444333333333333333333333322222 PP

>> PF11208.3  Protein of unknown function (DUF2992)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   7.7    0.0028       1.8      68     123 ..      21      78 ..       4      83 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0028
   PF11208.3  68 KrlqRevk..kevkkkkvstkAqealklelekkkkekkkkskekkeeekerkfqlkqe 123
                 +r++R      e  k++++ k q a ++el+++ +ekk++++++ke+ +e  ++ +q+
  MMETSP1325-20131115|6997_1  21 RRASRRRDenAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDRRYEQA 78 
                 55555544225555667788999999****************9999999988877765 PP

>> PF09871.4  Uncharacterized protein conserved in archaea (DUF2098)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.65     4e+02      62      78 ..      26      42 ..      14      51 .. 0.43
   2 ?    7.3   3.8    0.0063       3.9      32      91 .]      38      94 ..      27      94 .. 0.59

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.65
   PF09871.4 62 dkeelierikkeeeele 78
                 ++e  e+ k+e +  +
  MMETSP1325-20131115|6997_1 26 RRDENAEHAKNEAKLKQ 42
                23333333333332222 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0063
   PF09871.4 32 vlldstdLyYrteyLevvdkkkekkeeeeedkeelierikkeeeeleevdleseeae.GgG 91
                ++l + ++ Yr+e+ + ++   ekkee+ ++ke+ +e  +  e++  +v+ + + a+ GgG
  MMETSP1325-20131115|6997_1 38 AKL-KQQIAYREELRRQME---EKKEERRRQKEKDEEFDRRYEQAYANVATSGAGATlGGG 94
                677.88999***9999999...344444333333333333333345566665555555666 PP

>> PF03154.10  Atrophin-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   8.7    0.0048         3     580     622 ..      23      70 ..      16      94 .. 0.68

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0048
  PF03154.10 580 lakkreeavekakreaeqka....reererekekek.erererereae 622
                  +++r+e +e ak ea+ k     ree  r+ e++k er r++e++ e
  MMETSP1325-20131115|6997_1  23 ASRRRDENAEHAKNEAKLKQqiayREELRRQMEEKKeERRRQKEKDEE 70 
                 5799************86532234777777665555455555555443 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   7.7    0.0056       3.5      51     116 ..       7      78 ..       3      85 .. 0.55

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0056
   PF14235.1  51 qtlaelaaelleleaks......aaelkkkiekykkekkrikseakeleakakeaeeesdealhkhhrfalA 116
                 qt a l+ae +++++++      +ae +k+ +k+k++ +  ++ ++++e+k +e  +++++ ++ ++r+++A
  MMETSP1325-20131115|6997_1   7 QTGAALSAEVMDVARRAsrrrdeNAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDRRYEQA 78 
                 566666666666665544443334444444444444444444446666666666666666666666666666 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.2    0.0054       3.4     254     317 ..      16      82 ..       2      89 .. 0.46

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0054
   PF06375.6 254 vlkeaqeeereenkdakaeeskkssktk.....kkkqrkekeekkkkkkkskkrchqseeaaeesvqng 317
                 v++ a+     + +d +ae++k+ +k k     + + r++ eekk +++++k++ ++ +++ e+++ n 
  MMETSP1325-20131115|6997_1  16 VMDVARRAS--RRRDENAEHAKNEAKLKqqiayREELRRQMEEKKEERRRQKEKDEEFDRRYEQAYANV 82 
                 333333322..3333334444444444400000444445555555555555555555566666665554 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   6.7    0.0055       3.4     151     216 ..      24      86 ..       5      91 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0055
   PF02724.9 151 sasekrksesdedeeddddeededeeqrkrsnesslakslrrrrrrereekeevlekyYaqgtsyg 216
                 s ++++++e++++e++ +++   +ee r++ +   ++k+ rrr++++ ee  ++ e+ Ya+ ++ g
  MMETSP1325-20131115|6997_1  24 SRRRDENAEHAKNEAKLKQQIAYREELRRQME---EKKEERRRQKEKDEEFDRRYEQAYANVATSG 86 
                 22222222222222222222222222233222...3555666666666666666666666666555 PP

>> PF02284.11  Cytochrome c oxidase subunit Va
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.8     0.095        59      45      81 ..      14      50 ..       3      64 .. 0.75
   2 ?    8.3   0.6    0.0031       1.9       4      20 ..      64      80 ..      61      86 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.095
  PF02284.11 45 Pkiieaalraarrvndlasairvleavkdkvgdekel 81
                 ++++ a ra+rr ++ a   +    +k+++  ++el
  MMETSP1325-20131115|6997_1 14 AEVMDVARRASRRRDENAEHAKNEAKLKQQIAYREEL 50
                57999********998888777777777777666654 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0031
  PF02284.11  4 deetaeefdaryekyfd 20
                ++e +eefd+rye+ + 
  MMETSP1325-20131115|6997_1 64 QKEKDEEFDRRYEQAYA 80
                6899*********9886 PP

>> PF03839.11  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   3.8    0.0062       3.8      40      94 ..      23      79 ..       3      84 .. 0.58

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0062
  PF03839.11 40 keeskekkkekakeekkdteaeevdkel..kkeekkeekkkkkkkkvkLevneeqaf 94
                 ++ ++++ e ak+e k ++++   +el  + eekkee++++k+k+ + +   eqa+
  MMETSP1325-20131115|6997_1 23 ASRRRDENAEHAKNEAKLKQQIAYREELrrQMEEKKEERRRQKEKDEEFDRRYEQAY 79
                234566777777776666666655555411445666777777777777777777765 PP

>> PF07222.7  Proacrosin binding protein sp32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   4.3    0.0055       3.4     182     230 ..      23      73 ..       2      88 .. 0.54

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0055
   PF07222.7 182 sslsldekekvka..akpkeeqll.ekkqeqleehkteekkkqeeqeeeeke 230
                 +s + de+ +  +  ak k++    e+++ q+ee k+ee+++q+e++ee + 
  MMETSP1325-20131115|6997_1  23 ASRRRDENAEHAKneAKLKQQIAYrEELRRQMEE-KKEERRRQKEKDEEFDR 73 
                 5555555544444123444443331333444444.55566667777777533 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   4.4     0.006       3.7      64     123 ..       8      67 ..       2      85 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.006
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  64 nvealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnk 123
                   +al  e+ ++++   r+ +e  e  k+e kl+++++  +e + ++ee++e+  r+++k
  MMETSP1325-20131115|6997_1   8 TGAALSAEVMDVARRASRRRDENAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEK 67 
                 457888899999999999999999999999999999999999999988888777666544 PP

>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   7.2      0.01       6.2     227     286 ..      15      74 ..       5      87 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.01
   PF05262.6 227 kdadkakkkadtaednadkqrkevreklqeaknlpepadvsskkedkkvaeekkreieka 286
                 + +d a++   ++++na+  ++e++ k+q a + + + ++++kke+++ ++ek  e ++ 
  MMETSP1325-20131115|6997_1  15 EVMDVARRASRRRDENAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFDRR 74 
                 455666677777888888888888888888888888888888888888887877777773 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   4.6      0.01       6.2     124     178 ..      18      72 ..       2      80 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.01
  PF02862.12 124 rnsslslssedeeseeeseasklsqksksekkkeseeetkeeeeeakkekreelk 178
                   +   ++++de++e+++++ kl+q+ + +++ ++++e+k+ee++ +kek+ee +
  MMETSP1325-20131115|6997_1  18 DVARRASRRRDENAEHAKNEAKLKQQIAYREELRRQMEEKKEERRRQKEKDEEFD 72 
                 4455566677777777888888888888889999999999999999999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2279  (0.166691); expected 273.4 (0.02)
Passed bias filter:                     1286  (0.0940609); expected 273.4 (0.02)
Passed Vit filter:                       205  (0.0149941); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 461.19
//
Query:       MMETSP1325-20131115|6995_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.072   12.9   0.1      0.088   12.6   0.0    1.3  1  PF11409.3 Smad anchor for receptor activation (SARA)


Domain annotation for each model (and alignments):
>> PF11409.3  Smad anchor for receptor activation (SARA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   6.4e-06     0.088       8      24 ..      20      36 ..       9      45 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.4e-06
   PF11409.3  8 NPmEYCSTiPPlqQaaa 24
                N +E  S +PP++Qaa 
  MMETSP1325-20131115|6995_1 20 NGVEVKSSMPPHHQAAV 36
                678889*********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 230.92
//
Query:       MMETSP1325-20131115|7000_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|7000_2  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.45
# Mc/sec: 356.79
//
Query:       MMETSP1325-20131115|6998_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1177  (0.0860884); expected 273.4 (0.02)
Passed bias filter:                      539  (0.0394236); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.42s 00:00:00.97 Elapsed: 00:00:00.53
# Mc/sec: 791.25
//
Query:       MMETSP1325-20131115|6999_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.26   11.0   0.0    1.6  1  PF03941.10 Inner centromere protein, ARK binding region


Domain annotation for each model (and alignments):
>> PF03941.10  Inner centromere protein, ARK binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.9e-05      0.26      25      45 ..      24      44 ..      23      52 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.9e-05
  PF03941.10 25 pnLrealirqqkiDpeqiFGp 45
                p L +al+r+ + D++q+FG 
  MMETSP1325-20131115|6999_1 24 PILLRALMRHDGQDVDQVFGD 44
                67889***************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 502.77
//
Query:       MMETSP1325-20131115|7001_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-17   59.7   0.0    2.8e-08   33.0   0.0    2.0  2  PF00023.25 Ankyrin repeat
    4.1e-15   55.7   0.1    4.6e-15   55.6   0.1    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
    2.6e-14   51.7   0.0    3.5e-06   26.6   0.0    2.1  2  PF13606.1  Ankyrin repeat
    1.1e-12   47.6   0.2    4.5e-07   29.7   0.0    2.0  2  PF13857.1  Ankyrin repeats (many copies)
    7.6e-11   42.1   0.0      1e-10   41.7   0.0    1.2  1  PF13637.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
       0.04   13.1   0.0          3    7.0   0.0    2.0  2  PF10787.4  Uncharacterised protein from bacillus cereus group
      0.043   13.5   0.1        7.8    6.3   0.0    2.1  2  PF09722.5  Protein of unknown function (DUF2384)
        0.1   12.3   0.6       0.49   10.1   0.1    2.1  2  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   1.6e-11   2.8e-08       1      30 [.       7      36 ..       7      39 .. 0.95
   2 !   25.2   0.0   4.8e-09   8.1e-06       1      23 [.      40      62 ..      40      63 .] 0.95

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 1.6e-11
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlna 30
                +G TPL +A + g+levv+ L+++GA+++ 
  MMETSP1325-20131115|7001_1  7 NGLTPLIMATKDGHLEVVRALVEAGASVDQ 36
                7***************************96 PP

  == domain 2    score: 25.2 bits;  conditional E-value: 4.8e-09
                TSCBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLls 23
                +G TPL +Aa++g+levv+ L++
  MMETSP1325-20131115|7001_1 40 NGATPLFMAAQKGHLEVVRALVE 62
                799******************97 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.1   2.7e-18   4.6e-15      27      80 ..       9      62 ..       2      63 .] 0.93

  Alignments for each domain:
  == domain 1    score: 55.6 bits;  conditional E-value: 2.7e-18
   PF12796.2 27 etpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLle 80
                 tpL  A + g+le+v++L+eaga+v++ +++g tpL++A+++ghle+v+ L+e
  MMETSP1325-20131115|7001_1  9 LTPLIMATKDGHLEVVRALVEAGASVDQAMENGATPLFMAAQKGHLEVVRALVE 62
                57**************************************************98 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0     2e-09   3.5e-06       1      29 [.       7      35 ..       7      36 .. 0.96
   2 !   23.6   0.0   1.9e-08   3.2e-05       1      23 [.      40      62 ..      40      63 .] 0.95

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 2e-09
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                nG TpL +A + g++e+v+aL+e+ga ++
  MMETSP1325-20131115|7001_1  7 NGLTPLIMATKDGHLEVVRALVEAGASVD 35
                89************************986 PP

  == domain 2    score: 23.6 bits;  conditional E-value: 1.9e-08
   PF13606.1  1 nGnTpLhlAasngrielveaLle 23
                nG TpL++Aa++g++e+v+aL+e
  MMETSP1325-20131115|7001_1 40 NGATPLFMAAQKGHLEVVRALVE 62
                799******************98 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   2.7e-10   4.5e-07      15      56 .]       7      48 ..       5      48 .. 0.96
   2 !   21.2   0.0   1.3e-07   0.00022       1      36 [.      27      61 ..      27      63 .] 0.82

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 2.7e-10
   PF13857.1 15 ggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                +g tpL +A k g+levvr L+++ga+ +   ++g t+l +A
  MMETSP1325-20131115|7001_1  7 NGLTPLIMATKDGHLEVVRALVEAGASVDQAMENGATPLFMA 48
                799************************************887 PP

  == domain 2    score: 21.2 bits;  conditional E-value: 1.3e-07
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLl 36
                L+e+g a+v++  e+g tpL +Aa +g+levvr L+
  MMETSP1325-20131115|7001_1 27 LVEAG-ASVDQAMENGATPLFMAAQKGHLEVVRALV 61
                8999*.55555555666*****************98 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0     6e-14     1e-10       1      54 []       8      61 ..       6      61 .. 0.96

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 6e-14
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                glt+L +a ++g+le+v+ L+e g+++++  e+G t+L  Aa++g++e+++ L+
  MMETSP1325-20131115|7001_1  8 GLTPLIMATKDGHLEVVRALVEAGASVDQAMENGATPLFMAAQKGHLEVVRALV 61
                6899**************************999******************996 PP

>> PF10787.4  Uncharacterised protein from bacillus cereus group
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0018         3      89     108 ..       6      25 ..       3      36 .. 0.81
   2 ?    4.8   0.0    0.0085        14      89     106 ..      39      56 ..      30      62 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0018
   PF10787.4  89 eeagtPlvidtkkGkkdvkl 108
                 e++ tPl++ tk G+ +v  
  MMETSP1325-20131115|7001_1   6 ENGLTPLIMATKDGHLEVVR 25 
                 7899**********998865 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.0085
   PF10787.4  89 eeagtPlvidtkkGkkdv 106
                 e+++tPl + ++kG+ +v
  MMETSP1325-20131115|7001_1  39 ENGATPLFMAAQKGHLEV 56 
                 799***********9887 PP

>> PF09722.5  Protein of unknown function (DUF2384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0046       7.8      26      49 ..       7      30 ..       7      33 .. 0.90
   2 ?    5.5   0.0    0.0081        14      26      48 ..      40      62 ..      40      63 .] 0.89

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0046
   PF09722.5 26 gGrtPldlldteaGaelVedlLdr 49
                +G tPl +++ ++ +e+V+ l+++
  MMETSP1325-20131115|7001_1  7 NGLTPLIMATKDGHLEVVRALVEA 30
                799***************998765 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0081
   PF09722.5 26 gGrtPldlldteaGaelVedlLd 48
                +G tPl ++   + +e+V+ l++
  MMETSP1325-20131115|7001_1 40 NGATPLFMAAQKGHLEVVRALVE 62
                799*******9999999999876 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00029      0.49      18      35 ..      22      39 ..      19      40 .. 0.93
   2 ?    0.4   0.0      0.34   5.8e+02      18      25 ..      55      62 ..      53      63 .] 0.81

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00029
                HHHHHHHHTTTSHHHHHH CS
  PF00627.26 18 eakkALratnnnvErAve 35
                e+++AL +++ +v++A+e
  MMETSP1325-20131115|7001_1 22 EVVRALVEAGASVDQAME 39
                89**************98 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.34
                HHHHHHHH CS
  PF00627.26 18 eakkALra 25
                e+++AL +
  MMETSP1325-20131115|7001_1 55 EVVRALVE 62
                79999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 251.62
//
Query:       MMETSP1325-20131115|7004_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        5.1    7.0  12.0        1.7    8.5   5.7    2.1  2  PF02050.11 Flagellar FliJ protein


Domain annotation for each model (and alignments):
>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.7   0.00012       1.7       2     105 ..      29     134 ..      28     136 .. 0.80
   2 ?   -3.2   0.1      0.53   7.2e+03      16      16 ..     184     184 ..     171     206 .. 0.50

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00012
  PF02050.11   2 kaeraLaeaqqeleeaeekleelqqyreey.rqqlsgsm.qglsaaelrnyqafisaldeaiaqqqqeleqaekqveqareewqeanqelkklekLeerekkkeqk 105
                 +a  aLa++++     ee+++e ++y e + + q+++++ + +   +     +  + +d    ++  +++ a+ ++e  r +++    + ++++kLe+++++++++
  MMETSP1325-20131115|7004_1  29 EAGPALAKSRRDMMTREEQVAESKAYWEGLmEAQQQERAfTAAKRPRHELKMNEYGMIDVIRPSAVDKINFAKSRIEYIRYKYKIVDEDEEAIRKLEQERIERWKA 134
                 67779*************************5445555554444444444444445667777778899**********************************99975 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 0.53
  PF02050.11  16 e 16 
                 e
  MMETSP1325-20131115|7004_1 184 E 184
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       855  (0.0625366); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.50
# Mc/sec: 1097.53
//
Query:       MMETSP1325-20131115|7003_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-07   30.5  15.5    3.2e-07   29.8  10.8    1.3  1  PF04893.12 Yip1 domain


Domain annotation for each model (and alignments):
>> PF04893.12  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8  10.8   2.4e-11   3.2e-07       2     162 ..     117     262 ..     116     272 .. 0.91

  Alignments for each domain:
  == domain 1    score: 29.8 bits;  conditional E-value: 2.4e-11
  PF04893.12   2 lldPravferlkeepp........ilrapdlyllllalltlllgllaslnlgqtlasgeevqgltlssllgaiiggllglllgllllalllhliakllggkgsfkqtlsvvgyallPlilgalialllllllgtllllvgllaliWslvllylglkaahnlskkkalla 162
                  +d+++++ ++++++         +  + dl +++l+++ l ++ll++                 ++ ++g i+g+++   +g++ + +ll+l+ k  g ++ +  ++s +gy+llP+++ ++++++++l ++  + ++g+ a+ Ws+   +  +  + n+++ + l+a
  MMETSP1325-20131115|7003_1 117 DIDFSKIMSKTRAVMQpfraidpmLVGDADLTGPVLFCMCLGFTLLLA-----------------GKVHFGFIYGFFV---FGCWSIYMLLNLMTK--GDHIGIWMVMSTLGYCLLPIVIVSVLGIVFSLTGII-GNVIGAGAVGWSTLTATRLFVMSLNMDSARFLIA 262
                 68999999999999999999999*99999*******************.................8999999999999...9***********777..99999***************************9996.*************999999999999998888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.33s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 1707.40
//
Query:       MMETSP1325-20131115|7006_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-30  106.1   0.0    1.6e-30  105.7   0.0    1.1  1  PF00122.15 E1-E2 ATPase
    3.5e-12   45.5   0.0    5.9e-12   44.7   0.0    1.3  1  PF00690.21 Cation transporter/ATPase, N-terminus


Domain annotation for each model (and alignments):
>> PF00122.15  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.7   0.0   2.4e-34   1.6e-30       1     131 [.      85     209 .]      85     209 .] 0.98

  Alignments for each domain:
  == domain 1    score: 105.7 bits;  conditional E-value: 2.4e-34
  PF00122.15   1 viilavllnalvefvqeykaekalesLkrlspetaatvirdgkeqeipakeLvvGDiviiktGdrvpaDgrlieagslevdesalTGEslpvtksvelaergnkvfsgtvvlsgegkaiVtatgketeigk 131
                 v++++ +lna+++++++ ka +a+++Lk   +++ a+v r gk  ++p   +v+GD v++ +G  +paD+ l  ++ + vd++alTGEslpvt +     +g+k  +g+ +++ge++ai++atg +t++gk
  MMETSP1325-20131115|7006_1  85 VLLILQILNATIGWYEDMKAGNAVAALKASLKPE-ANVKRSGKYITVPGGTVVPGDRVVLHAGAAIPADCMLGPCEPIDVDQAALTGESLPVTMH-----MGDKPKMGSNCTRGEAEAICIATGGQTFFGK 209
                 5788999**************************9.************************************************************.....*****************************97 PP

>> PF00690.21  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0   8.6e-16   5.9e-12      15      68 ..      21      73 ..      11      74 .. 0.91

  Alignments for each domain:
  == domain 1    score: 44.7 bits;  conditional E-value: 8.6e-16
  PF00690.21 15 tdlenGLtsdeaaerlkkyGpNelpepkkksllrlflrqfkdplvilLlvaaiv 68
                 +  +GLt++ea++rl  yG+Nel e+ ++++l+++l+ f+ p+ i+ + a i+
  MMETSP1325-20131115|7006_1 21 DTGDDGLTDAEAERRLGIYGRNEL-EENEEHPLMKLLKGFFGPMPIMIWCAIIL 73
                47789*******************.**************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 982.04
//
Query:       MMETSP1325-20131115|7007_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 516.86
//
Query:       MMETSP1325-20131115|7009_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.7    7.2   5.3        1.5    7.3   3.0    1.3  1  PF03308.11 ArgK protein
        2.4    6.7   8.2        2.6    6.6   5.7    1.0  1  PF00750.14 tRNA synthetases class I (R)
          4    7.3   7.7        2.7    7.8   0.7    2.8  2  PF05465.8  Halobacterial gas vesicle protein C (GVPC) repeat


Domain annotation for each model (and alignments):
>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   3.0   0.00034       1.5     182     253 ..      50     121 ..      47     123 .] 0.90

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00034
                 HHHHHHHHHHHHHHS--SBTTB--EEEE-BTTTTB--HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH CS
  PF03308.11 182 aekaarelraaleleeekekeWrppvlktsavegeGidelvdaieehrevlektGlleekrreraeeelkel 253
                  e  +re+ ++++ e+++e++ r + lk  a+  e ++el ++++  +e ++k+ ++++ +++r++e + ++
  MMETSP1325-20131115|7009_1  50 MEVKRREFLFMQNAEKKAEDDLRRQRLKDEAKAREDLKELKKQLNMSQEEMKKAETRKAEEQARTAELMIRM 121
                 56678899999999****************************************999999999999987655 PP

>> PF00750.14  tRNA synthetases class I (R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.7   0.00056       2.6      78     168 ..       8      99 ..       1     119 [. 0.78

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00056
  PF00750.14  78 aslekaak.eeltkeieiqdledfYkeskidkiaeeieekakdalkerarsyvvllqsedee.frkawkkklvdlikselnkiytaldvtlie 168
                 a +ek+a+  e++++ +++  ++ ++++ ++ + ee    +k  +k+r++ ++++ +++ e+ +r+ + k      +++l++++++l++ + e
  MMETSP1325-20131115|7009_1   8 AAFEKEAQlHEAKVRAQMEAQQAAFEQMRMKLAGEETLMGQKMEVKRREFLFMQNAEKKAEDdLRRQRLK-DEAKAREDLKELKKQLNMSQEE 99 
                 555554442566788999999****************9999999***************99965555444.56778999*********99955 PP

>> PF05465.8  Halobacterial gas vesicle protein C (GVPC) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.6     0.031   1.4e+02       8      23 ..       3      11 ..       1      12 [. 0.51
   2 ?    7.8   0.7    0.0006       2.7       5      18 ..      22      35 ..      15      36 .. 0.68

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.031
   PF05465.8  8 IaelreeFedtqaAFe 23
                +++++++F       e
  MMETSP1325-20131115|7009_1  3 MEAQQAAF-------E 11
                55555555.......4 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0006
   PF05465.8  5 laaIaelreeFedt 18
                +a +++++++Fe++
  MMETSP1325-20131115|7009_1 22 RAQMEAQQAAFEQM 35
                56666677776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2563  (0.187463); expected 273.4 (0.02)
Passed bias filter:                      858  (0.062756); expected 273.4 (0.02)
Passed Vit filter:                       114  (0.00833821); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.42s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 526.34
//
Query:       MMETSP1325-20131115|7010_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-06   25.2   0.1    1.6e-05   24.3   0.0    1.5  2  PF00023.25 Ankyrin repeat
    1.5e-05   25.1   0.0    1.9e-05   24.7   0.0    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
  ------ inclusion threshold ------
       0.01   16.2   0.1       0.25   11.8   0.0    2.1  2  PF13637.1  Ankyrin repeats (many copies)
      0.055   13.6   0.0      0.084   13.0   0.0    1.3  1  PF13606.1  Ankyrin repeat
        0.1   12.7   0.0       0.19   11.8   0.0    1.4  1  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       2.5   6.8e+03      27      32 ..      66      71 ..      65      72 .. 0.82
   2 !   24.3   0.0   5.7e-09   1.6e-05       1      32 [.      73     104 ..      73     105 .. 0.97

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.5
                STTHBH CS
  PF00023.25 27 dlnaqd 32
                d++a++
  MMETSP1325-20131115|7010_1 66 DPDARN 71
                899998 PP

  == domain 2    score: 24.3 bits;  conditional E-value: 5.7e-09
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 dG+++LHl +++  ++ +klL+++G d++ +d
  MMETSP1325-20131115|7010_1  73 DGQSALHLTSSKCFVQGIKLLIEHGSDVDSRD 104
                 8*****************************99 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   6.9e-09   1.9e-05      50      89 .]      65     104 ..      60     104 .. 0.95

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 6.9e-09
   PF12796.2  50 advnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89 
                  d++a++++g+++Lhl  +++ +  +klL+e+g+dv++rd
  MMETSP1325-20131115|7010_1  65 SDPDARNADGQSALHLTSSKCFVQGIKLLIEHGSDVDSRD 104
                 6999*********************************997 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     9e-05      0.25      25      54 .]      65      94 ..      62      94 .. 0.93
   2 ?    6.5   0.0    0.0041        11      17      32 ..      90     105 ..      82     107 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9e-05
   PF13637.1 25 idinrtdesGntaLhiAalrgnieilklLl 54
                 d+++++++G +aLh+  ++ +++ +klL+
  MMETSP1325-20131115|7010_1 65 SDPDARNADGQSALHLTSSKCFVQGIKLLI 94
                599*************99999999999997 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0041
   PF13637.1  17 vklLlekgidinrtde 32 
                 +klL+e+g d++ +d+
  MMETSP1325-20131115|7010_1  90 IKLLIEHGSDVDSRDS 105
                 89**********9975 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.1e-05     0.084       1      29 [.      73     101 ..      73     102 .. 0.95

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.1e-05
   PF13606.1   1 nGnTpLhlAasngrielveaLlengadin 29 
                 +G+++Lhl  s++ ++ +++L+e+g d++
  MMETSP1325-20131115|7010_1  73 DGQSALHLTSSKCFVQGIKLLIEHGSDVD 101
                 79*************************96 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     7e-05      0.19       8      47 ..      66     105 ..      61     107 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 7e-05
   PF13857.1   8 dvnatdeggntpLhlAakggalevvrlLlapgadlnlrds 47 
                 d++a++  g+++Lhl+ ++  ++ ++lL+++g+d + rds
  MMETSP1325-20131115|7010_1  66 DPDARNADGQSALHLTSSKCFVQGIKLLIEHGSDVDSRDS 105
                 7899999999************************999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 488.31
//
Query:       MMETSP1325-20131115|7008_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-10   41.5   0.0    3.6e-10   39.7   0.0    1.9  2  PF01713.16 Smr domain


Domain annotation for each model (and alignments):
>> PF01713.16  Smr domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.25   3.4e+03      49      83 .]      59      94 ..      56      94 .. 0.81
   2 !   39.7   0.0   2.6e-14   3.6e-10       1      81 [.     212     286 ..     212     287 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.25
                HHHHHHT.THCECCEEEEEE----------EEEEE- CS
  PF01713.16 49 vkewLde.srkaeevsafreaeprhGgsGalyVllk 83
                v++  ++ s+  +ev+a+   + ++ ++G ++V lk
  MMETSP1325-20131115|7008_1 59 VQQQVHDdSDTTPEVEAVPLGSTSEVEPGDVVVVLK 94
                666677778889999999999999999999999876 PP

  == domain 2    score: 39.7 bits;  conditional E-value: 2.6e-14
                 EE-----HHHHHHHHHHHHHHHHHHHH-EEEEE----....---HHHHHH.HHHHTTHCECCEEEEEE----------EEEE CS
  PF01713.16   1 lDLHgltveeAlealeefldrarskglrtvliitGkGshseggvLkkavk.ewLdesrkaeevsafreaeprhGgsGalyVl 81 
                 +DL+g++ +eA +++e+fl++a  +g+  v   +G+G    +g+Lk+ ++ e+L   + a+ v+++r+a +++Gg++ ++V+
  MMETSP1325-20131115|7008_1 212 CDLRGFRYDEACAEVERFLSNAAVEGRPVVFLLHGHG----TGALKRGLReEFL---PTAPGVKKWRRADEADGGDAFTMVE 286
                 5************************************....*****99973699...*********************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.43s 00:00:01.06 Elapsed: 00:00:00.52
# Mc/sec: 1345.65
//
Query:       MMETSP1325-20131115|7011_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.2   1.7       0.14   11.9   1.2    1.1  1  PF06495.6 Fruit fly transformer protein


Domain annotation for each model (and alignments):
>> PF06495.6  Fruit fly transformer protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.2     1e-05      0.14      55      98 ..      22      65 ..       9      76 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1e-05
   PF06495.6 55 errtrsrsrsqsaeresrqrrrrsrsrsrrrsdsrsksssster 98
                + +t s s++  +++e+r++r+r+ s +r + + r +++ ++  
  MMETSP1325-20131115|7011_1 22 SPKTSSYSKAFPSQKEKRKKRQRKGSAERLEGELRARLRLACTA 65
                4578899****************************999988854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       498  (0.0364248); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 570.33
//
Query:       MMETSP1325-20131115|7013_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 434.34
//
Query:       MMETSP1325-20131115|7014_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.038   13.5   0.2       0.11   11.9   0.1    1.8  1  PF09047.5 MEF2 binding
       0.28   11.2   2.5        1.4    9.0   0.1    2.6  3  PF11159.3 Protein of unknown function (DUF2939)


Domain annotation for each model (and alignments):
>> PF09047.5  MEF2 binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.7e-05      0.11      10      25 ..     184     199 ..     182     205 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.7e-05
   PF09047.5  10 SEETKQKLKsvILSaQ 25 
                 S ETK K   +ILS+Q
  MMETSP1325-20131115|7014_1 184 SIETKKKVMRAILSSQ 199
                 66************** PP

>> PF11159.3  Protein of unknown function (DUF2939)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.1    0.0002       1.4      28      78 ..       8      60 ..       7      73 .. 0.80
   2 ?   -1.8   0.0      0.46   3.1e+03      47      58 ..     198     209 ..     188     236 .. 0.50
   3 ?    1.1   0.0     0.061   4.1e+02      44      80 ..     224     259 ..     221     264 .] 0.56

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0002
   PF11159.3 28 DaaalselvDfpalresLkaqltaelakri..speladnplaalgaalaaali 78
                D  ++++ vD +a++ +Lk q +++++++    ++l+ ++ a+ ++ + +++ 
  MMETSP1325-20131115|7014_1  8 DKTKIEDTVDDEAVQSQLKGQREEYALRKEivGRQLSAEEEAEVAENVRRGIL 60
                8899*****************99988766558777777777777766666655 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.46
   PF11159.3  47 aqltaelakris 58 
                 +q+ + +++r  
  MMETSP1325-20131115|7014_1 198 SQVIKDIRSRKV 209
                 444443333331 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.061
   PF11159.3  44 sLkaqltaelakrispeladnplaalgaalaaalidp 80 
                 +L ++++a++ak+++++ a ++ a+ +a+++++ ++p
  MMETSP1325-20131115|7014_1 224 QLCEEIKARYAKEAEAAAAAEEPAG-AAMAEEGPVEP 259
                 6777888888888844444333233.33444455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       949  (0.0694119); expected 273.4 (0.02)
Passed bias filter:                      569  (0.0416179); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.40s 00:00:01.01 Elapsed: 00:00:00.59
# Mc/sec: 1072.27
//
Query:       MMETSP1325-20131115|7017_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 423.19
//
Query:       MMETSP1325-20131115|7018_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   10.6   0.0       0.15   10.3   0.0    1.1  1  PF03252.8 Herpesvirus UL21


Domain annotation for each model (and alignments):
>> PF03252.8  Herpesvirus UL21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   1.1e-05      0.15     375     435 ..       5      65 ..       3      82 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 1.1e-05
   PF03252.8 375 deevladavnellrealalgavaeallradllepkvlaakaeskslkadatallelaetsl 435
                 d  +ladavnel  +++ +g++++ + ++dl++p+  + ++ +++ +ad+++ +++ ++s 
  MMETSP1325-20131115|7018_1   5 DTFELADAVNELTGQVISTGQTMHLVEKYDLAHPERDPPNSLTEAEFADMVRTIDCDSDSW 65 
                 55589******************************98888888888888888888766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 514.77
//
Query:       MMETSP1325-20131115|7019_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-21   74.0   0.0    6.6e-21   73.9   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.9   0.0   4.8e-25   6.6e-21     324     462 ..       4     141 ..       1     143 [] 0.91

  Alignments for each domain:
  == domain 1    score: 73.9 bits;  conditional E-value: 4.8e-25
  PF03028.10 324 llgeimYGGritddfDrrllrtyleelfteelldeelelapkdesfkvPek..keyeeyleyieeLpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksreekvkqvlkdileklpklfdkeelke 462
                 l++ + YGGritdd D+r+ + +++ ++++++l e ++l + + + ++ ++  + +++yl y +++p + +Pe++G+h Na+i+   +e+++ ++ +l lqpr+ +   g g+s+ee++ +++k i ekl +  d e+++ 
  MMETSP1325-20131115|7019_1   4 LTSLVNYGGRITDDKDMRTADIIVADMINPAMLAEGHKLSRSGIYCAIEPNpdSPRQSYLDYFDTFPITPEPEVFGMHDNANITCAMNEADANFTIILSLQPRTGG---GGGASQEEIIGNIAKGIEEKLRTSWDLEAVRL 141
                 567789***********************************8888887444247899**********************************************988...677889****************9999988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 685.36
//
Query:       MMETSP1325-20131115|7015_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.9   0.0       0.06   13.2   0.0    1.3  1  PF06058.8 Dcp1-like decapping family


Domain annotation for each model (and alignments):
>> PF06058.8  Dcp1-like decapping family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   4.4e-06      0.06      73     118 ..      48      93 ..      46      97 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.4e-06
                 --EEEEE-SGGGEEEETTEEEEEETTTEEE-EEESSTHHHHHHHHH CS
   PF06058.8  73 enlvepitkdlelqlqdnfllyrnenseiyglWfydkeeaeriakl 118
                 ++ ++ +++ ++++++ + l + ++ ++iygl ++d ee +r  +l
  MMETSP1325-20131115|7015_1  48 SHRMQALKQAIQFSSTTPTLRFTETLVHIYGLRVFDIEEYQRTWRL 93 
                 578899***********************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 891.44
//
Query:       MMETSP1325-20131115|7012_1  [L=362]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       463  (0.0338648); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.52
# Mc/sec: 1668.23
//
Query:       MMETSP1325-20131115|7024_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.45
# Mc/sec: 276.91
//
Query:       MMETSP1325-20131115|7025_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 569.80
//
Query:       MMETSP1325-20131115|7023_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.5    9.0   5.2       0.87    9.7   2.2    1.7  1  PF12440.3 Melanoma associated antigen family N terminal


Domain annotation for each model (and alignments):
>> PF12440.3  Melanoma associated antigen family N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.2   6.4e-05      0.87      31      86 ..      39      96 ..      32     108 .. 0.89

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 6.4e-05
   PF12440.3 31 aeee.estsssspliegtpesvpaagspsppqspqgasststaaaa.vsgsksdegss 86
                a++e + ++sss ++e  +e + +  ++   qsp  a+++s a+aa v+ s s+ ++ 
  MMETSP1325-20131115|7023_1 39 ASSEpTIAFSSSGDVEELMERIDNLDMRKGNQSPVAAPTPSLATAAsVPTSASSAAPH 96
                444558999**********************************999999999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 765.89
//
Query:       MMETSP1325-20131115|7028_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0062   16.1   6.9        1.1    8.9   0.1    3.1  3  PF09457.5  FIP domain
  ------ inclusion threshold ------
      0.023   13.1   8.3      0.024   13.0   5.7    1.0  1  PF05667.6  Protein of unknown function (DUF812)
      0.038   12.7   4.4      0.041   12.6   3.1    1.0  1  PF04111.7  Autophagy protein Apg6
      0.044   13.1   7.7       0.96    8.7   5.4    2.0  1  PF06810.6  Phage minor structural protein GP20
      0.085   10.8   8.8        0.1   10.5   6.1    1.2  1  PF05557.8  Mitotic checkpoint protein
       0.16   10.3   9.8       0.16   10.3   6.8    1.0  1  PF02029.10 Caldesmon
       0.39   10.1  10.2       0.46    9.9   7.0    1.0  1  PF05266.9  Protein of unknown function (DUF724)
        0.6    9.5  14.6       0.69    9.3  10.2    1.0  1  PF00769.14 Ezrin/radixin/moesin family
       0.63    9.8   8.1        1.5    8.6   0.6    2.1  2  PF06667.7  Phage shock protein B
        1.1    8.4   7.5        1.2    8.3   5.2    1.1  1  PF04086.8  Signal recognition particle, alpha subunit, N-terminal
        1.3    8.0   7.4        1.5    7.9   5.1    1.0  1  PF11932.3  Protein of unknown function (DUF3450)
        1.8    8.6   7.4        2.3    8.3   5.1    1.1  1  PF02413.12 Caudovirales tail fibre assembly protein
        2.1    7.8   8.4        2.6    7.5   5.9    1.1  1  PF04156.9  IncA protein
        3.4    7.4   6.9        3.7    7.3   4.8    1.1  1  PF10454.4  Protein of unknown function (DUF2458)


Domain annotation for each model (and alignments):
>> PF09457.5  FIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.1    0.0011       1.1      11      27 ..      24      40 ..      18      41 .. 0.89
   2 ?    5.1   0.5     0.018        18      14      28 ..      51      65 ..      46      66 .. 0.86
   3 ?    4.6   0.0     0.027        26      16      28 ..      70      82 ..      68      82 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0011
                HHHHHHHHHHHHHHHHH CS
   PF09457.5 11 kqEeelsrkdehvkELe 27
                  Eee++rkde ++ Le
  MMETSP1325-20131115|7028_1 24 AAEEEAKRKDETIRTLE 40
                57*************98 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.018
                HHHHHHHHHHHHHHH CS
   PF09457.5 14 eelsrkdehvkELed 28
                + ls+kde++k Le+
  MMETSP1325-20131115|7028_1 51 KLLSEKDERIKSLEE 65
                6789*********97 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.027
                HHHHHHHHHHHHH CS
   PF09457.5 16 lsrkdehvkELed 28
                +s+kd+++k Le+
  MMETSP1325-20131115|7028_1 70 ASEKDQRIKSLEE 82
                589********96 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   5.7   2.4e-05     0.024     347     414 ..      11      78 ..       1      83 [. 0.87

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.4e-05
   PF05667.6 347 veeeikalkskikeveeeleevkeeneeleeevkikkrtvelledaeenvakLqalveasserlleLa 414
                 +++  +++ ++++++eee++ ++e++ +le      +  ++ll++++e ++ L++ v+ +se+ + ++
  MMETSP1325-20131115|7028_1  11 SKSMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRIK 78 
                 445567899***************************************************99977765 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.1   4.2e-05     0.041      28      99 ..      12      83 ..       7      86 .] 0.88

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.2e-05
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7 28 dllleeldkelraaeeekdvYkqylekLesqnkeeenvealdseldeLkkeeerlleeleelekeedkldee 99
                +++ e +d ++raaeee +   +   +Le     ee +++l se+de  k+ e+ +    e ++  ++l+e+
  MMETSP1325-20131115|7028_1 12 KSMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRIKSLEEA 83
                67999*********************************************9999888777777777777766 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   5.4   0.00099      0.96      16      91 ..       9      84 ..       1      86 [] 0.70

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00099
   PF06810.6 16 qeeKskldkaeeeldslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkkeeyeaklkdlklnnaielal 91
                 ++Ks  ++ ++++ +++e+ k +d++i  L++ ++ +e   k + +  e +k  +e+++   ++ +  + +e+a+
  MMETSP1325-20131115|7028_1  9 TNSKSMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRIKSLEEAV 84
                4577777888888999999999999999999998888888887788888888877776665555555555555555 PP

>> PF05557.8  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   6.1   0.00011       0.1     172     239 ..      21      84 ..       2      86 .] 0.61

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00011
   PF05557.8 172 elselqlkaqnadlelksleseleelkeqleekqkklaeaekklqsLkseqaesadnsvkikeLeeel 239
                 ++     +a+++d  +++l    e      e + k l e +++++sL+++ a  ++++++ik+Lee +
  MMETSP1325-20131115|7028_1  21 QMRAAEEEAKRKDETIRTL----EAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRIKSLEEAV 84 
                 2222222222222222222....222233344445559***************************976 PP

>> PF02029.10  Caldesmon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   6.8   0.00016      0.16      28     104 ..       8      83 ..       1      86 [] 0.82

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00016
  PF02029.10  28 slgevtekeevnaqnsvadeevktstddeaallerlarrEerrqkrlqealerqkefdptitdaslsepsrraqede 104
                 ++   + +e+ +aq   a+ee+k+  d+   +le  a +Ee + k l+e  er k  ++ ++ as +  + +  e++
  MMETSP1325-20131115|7028_1   8 QTNSKSMQESFDAQMRAAEEEAKRK-DETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRIKSLEEA 83 
                 3445566788889988999998875.88899********************************99999887777664 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   7.0   0.00048      0.46     104     178 ..       7      80 ..       5      85 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00048
   PF05266.9 104 dqtkkleerkklekeiaekeieqqeleseiaelerkilelrrkeallkekkeaedkeiarlkseasklkqeledv 178
                 +qt+++ +++ ++ ++ + e e ++ ++ i+ le   +  + +++ll+ek e+ +  ++++ + as+ +q ++++
  MMETSP1325-20131115|7028_1   7 HQTNSKSMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIK-SLEEAVAGASEKDQRIKSL 80 
                 89*****************************************999999888765.4555555555555555554 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  10.2   0.00071      0.69       2      76 ..       2      77 ..       1      85 [. 0.88

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00071
  PF00769.14  2 kaerereelekrleq.leeemrkaqkeleeseekaeeleeklkqeeeeaqklekkakeleeekerLeeeaakseke 76
                +ae+  +   k++++  + +mr a++e++++ e+++ le+ +  ee++a++l +k + ++  +e++  +++k ++ 
  MMETSP1325-20131115|7028_1  2 EAEHAHQTNSKSMQEsFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRI 77
                7999999999***8736889*****************************************999999888887774 PP

>> PF06667.7  Phage shock protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   1.4     0.011        11      30      70 ..       8      48 ..       5      53 .. 0.84
   2 ?    8.6   0.6    0.0015       1.5      31      65 ..      48      84 ..      44      86 .] 0.80

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.011
   PF06667.7 30 kkksqglseedekeLeeLlekaekleeRietlErildaesp 70
                + +s++++e+  ++++   e+a++ +e i+tlE+   +e+ 
  MMETSP1325-20131115|7028_1  8 QTNSKSMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEA 48
                55678888888999*******************98777765 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0015
   PF06667.7 31 kksqglseede..keLeeLlekaekleeRietlEril 65
                 +++ lse+de  k+Lee ++ a++ ++Ri++lE+ +
  MMETSP1325-20131115|7028_1 48 AQAKLLSEKDEriKSLEEAVAGASEKDQRIKSLEEAV 84
                5667788888744689999999************866 PP

>> PF04086.8  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.2    0.0013       1.2      86     151 ..      12      77 ..       1      85 [. 0.64

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0013
   PF04086.8  86 aeFdeiFdqllrelEkeskkqakspkamkkfeeskkskktvksmierkpkekglekekkkkkeqes 151
                    +e Fd ++r +E+e+k+++++  + +    s++++    s  +++ k+ +++  + ++k+q  
  MMETSP1325-20131115|7028_1  12 KSMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRI 77 
                 367999*************98888887777777777777666555555554444444444444433 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   5.1    0.0015       1.5      35     107 ..       5      80 ..       1      85 [. 0.76

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0015
   PF11932.3  35 naaaaqsqkkidkladqtqellaeieqlqeevenlkv...yndqleklvenqqqelaslqeqieeieetrqeivPl 107
                 +a +++s++  +++++q++++++e ++  e +++l++    ++ ++kl+++++++++sl+e +++ +e  q i  l
  MMETSP1325-20131115|7028_1   5 HAHQTNSKSMQESFDAQMRAAEEEAKRKDETIRTLEAaagSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRIKSL 80 
                 44555666666667777777777777777777777776669999**********************9999988765 PP

>> PF02413.12  Caudovirales tail fibre assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.1    0.0023       2.3      32     104 ..       9      82 ..       2      84 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0023
  PF02413.12  32 lpel.leaqppgkwdvwdgeglpvwvtdakeelqaqaeekkqqllaqasekiaplqdavdlgmatdeekaqLta 104
                 ++++ ++++ + +++ + +e+  +++t++  e  a  ee + +ll++ +e+i++l++av+    +d+  ++L++
  MMETSP1325-20131115|7028_1   9 TNSKsMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASEKDQRIKSLEE 82 
                 4555588888999999999999999999999999*************************999999999999986 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   5.9    0.0026       2.6     119     179 ..       9      79 ..       2      84 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0026
   PF04156.9 119 ellqeelksleerlesleesikelakeirelr..........eeisdlkeevqelrselerlqedlqrlqe 179
                 ++ +++ +s+ +++ ++ee+ k++ + ir l+          + +s+++e+++ l+++++  +e  qr++ 
  MMETSP1325-20131115|7028_1   9 TNSKSMQESFDAQMRAAEEEAKRKDETIRTLEaaagseeaqaKLLSEKDERIKSLEEAVAGASEKDQRIKS 79 
                 44447788889999999999999999999999999888888888888888888888888888888888765 PP

>> PF10454.4  Protein of unknown function (DUF2458)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   4.8    0.0038       3.7      36     104 ..       4      72 ..       1      83 [. 0.89

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0038
   PF10454.4  36 qhkhekqwekerealikkqearkekkkkldavLksvgaqvddgsknsrkekeeeaeLeafdekvlkask 104
                  h h+ +++   e+  ++++a  e+ k+ d+ ++  +a+  +++ ++++  e+++ +++++e v+ as+
  MMETSP1325-20131115|7028_1   4 EHAHQTNSKSMQESFDAQMRAAEEEAKRKDETIRTLEAAAGSEEAQAKLLSEKDERIKSLEEAVAGASE 72 
                 699***********************************9999977777777999999*****9988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1279  (0.0935489); expected 273.4 (0.02)
Passed bias filter:                      697  (0.0509801); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.47u 0.46s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 388.84
//
Query:       MMETSP1325-20131115|7031_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|7029_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-17   62.7   0.0    3.6e-17   62.1   0.0    1.3  1  PF01386.14 Ribosomal L25p family


Domain annotation for each model (and alignments):
>> PF01386.14  Ribosomal L25p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.0   2.6e-21   3.6e-17       8      88 .]      33     115 ..      23     115 .. 0.93

  Alignments for each domain:
  == domain 1    score: 62.1 bits;  conditional E-value: 2.6e-21
  PF01386.14   8 evgkgaarrlRregkvPAviYgkgkepvsisvdekeleklle..keagestvleLkidgkkekvlvkdiqrhpvkdkilHvDF 88 
                 e g ++ rrlR+ g vP++iYg+g  ++ ++vd+kel++ ++    ++e+ v++L + ++++kv+ ++ q hpv+d++l v F
  MMETSP1325-20131115|7029_1  33 EGGSKQCRRLRQRGWVPGIIYGGGHREQLVKVDSKELMRQIRarPVSFENCVFDLLVGDQTHKVVPRQAQLHPVTDEVLSVNF 115
                 557999***********************************965679********************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 924.31
//
Query:       MMETSP1325-20131115|7027_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1080.71
//
Query:       MMETSP1325-20131115|7032_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 708.26
//
Query:       MMETSP1325-20131115|7033_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 172.37
//
Query:       MMETSP1325-20131115|7036_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       515  (0.0376682); expected 273.4 (0.02)
Passed bias filter:                      452  (0.0330603); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 420.49
//
Query:       MMETSP1325-20131115|7035_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.5e-21   73.5   0.0    1.2e-20   73.2   0.0    1.1  1  PF12781.2 ATP-binding dynein motor region D5
    1.5e-06   27.1   0.0      2e-06   26.7   0.0    1.1  1  PF12777.2 Microtubule-binding stalk of dynein motor


Domain annotation for each model (and alignments):
>> PF12781.2  ATP-binding dynein motor region D5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   0.0   1.7e-24   1.2e-20       2     114 ..      71     188 ..      70     190 .] 0.89

  Alignments for each domain:
  == domain 1    score: 73.2 bits;  conditional E-value: 1.7e-24
   PF12781.2   2 ltddadvavwnneglpsdrmstenatilsncerwpllvdaqlqgikwiknkygedl...rvirigqkgyldvieqaisegdtvlienleesidpvldpllgrntikkgr..yikigdk 114
                 l+d   +  w  eglpsd +s++n  +++n+ r+pll+d+q q + wik + +  +    ++ + +    d +e a+ +g+++++  +e+ idp+ldp+l +++i kgr  +i + dk
  MMETSP1325-20131115|7035_1  71 LVDVGTIGDWAMEGLPSDPLSIQNGILVTNSSRYPLLIDPQGQALAWIKSRESARMpphGTVLLSDSKLKDKLEFAMGDGKALVVTGVENDIDPMLDPVLEKEIIVKGRrkMITVSDK 188
                 678888999****************************************9988776332467788888889*************************************7336777776 PP

>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   2.9e-10     2e-06     292     337 ..       2      47 ..       1      52 [. 0.92

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 2.9e-10
   PF12777.2 292 envrwaeavenfksqektlcgdvllitafvsyvgfftkkyrqelle 337
                 e  rw+e  +nf   ++ l gd  + +afvsy g f ++yr+ + +
  MMETSP1325-20131115|7035_1   2 ERTRWTEDAKNFDATKQRLVGDCAVGSAFVSYCGPFNQEYRSYMTN 47 
                 778**************************************97765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 929.20
//
Query:       MMETSP1325-20131115|7038_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.05   12.8   0.1      0.055   12.7   0.1    1.1  1  PF00664.18 ABC transporter transmembrane region


Domain annotation for each model (and alignments):
>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1     4e-06     0.055      64     100 ..      19      56 ..       2      59 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4e-06
  PF00664.18  64 l.lertgqrirkrlfrallrkilglfdsffdknsvGel 100
                 + + +++q   + + + ++r++++l++sf+ +n++G l
  MMETSP1325-20131115|7038_1  19 ItFTHISQASLRSFAATIFRHLHQLDSSFHLNNPSGLL 56 
                 24668899999999999*******************77 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 328.20
//
Query:       MMETSP1325-20131115|7030_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.083   12.4   0.0       0.13   11.8   0.0    1.2  1  PF02146.12 Sir2 family


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   9.2e-06      0.13      39      94 ..     198     251 ..     184     255 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.2e-06
                 HHHHHH...HHHHCCCCCCT..S---HHHHHHHHHHH---EEEEEE--SS-HHHH- CS
  PF02146.12  39 kllkeepevfynlarellpkaeakpnaaHkflkklekkgkllrliTQNidnLekka 94 
                    +++ +++y+ +++l++  + +p+++H + +   + g+ + ++TQ +d+Le++a
  MMETSP1325-20131115|7030_1 198 VGAESDQKPWYEGVQMLCK--DCEPTQMHWLQARRIHGGDASLIVTQIVDGLERAA 251
                 445567789*******996..5*******9999999999**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1212.27
//
Query:       MMETSP1325-20131115|7039_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-08   33.6   0.0    0.00032   19.6   0.0    2.2  2  PF00036.27 EF hand
    1.2e-08   34.8   0.3    9.5e-07   28.7   0.0    1.8  2  PF13499.1  EF-hand domain pair
    3.6e-07   29.4   0.2     0.0047   16.5   0.0    2.3  2  PF13405.1  EF-hand domain
    1.9e-06   27.2   0.1     0.0062   16.0   0.0    2.2  2  PF13833.1  EF-hand domain pair
    8.2e-06   24.8   0.1      0.061   12.5   0.0    2.3  2  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.075   13.2   0.0       0.11   12.7   0.0    1.3  1  PF03448.12 MgtE intracellular N domain


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   1.4e-07   0.00032       1      28 [.      61      88 ..      61      89 .. 0.90
   2 !   12.2   0.0   3.4e-05     0.077       4      27 ..     100     123 ..      97     125 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 1.4e-07
                HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkk 28
                e+ ++F+++D+Dg+G I+  Ef  ++++
  MMETSP1325-20131115|7039_1 61 EVVRIFSLLDRDGTGDINAGEFELLCRA 88
                5679******************999986 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 3.4e-05
                 HHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfkealk 27 
                 +a + +D D +G I ++Ef+++++
  MMETSP1325-20131115|7039_1 100 RALEALDSDDSGAICLSEFLRWWR 123
                 67889***************9987 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   4.2e-10   9.5e-07       4      65 ..      64     121 ..      54     122 .. 0.90
   2 !   10.7   0.0   0.00018       0.4       4      30 ..     100     126 ..      97     129 .. 0.87

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 4.2e-10
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 ++F+llD+dg+g ++  e++ l+++lg + s  e+ +     ++ lD++ +G + ++Efl +
  MMETSP1325-20131115|7039_1  64 RIFSLLDRDGTGDINAGEFELLCRALGKQYSKAETARA----LEALDSDDSGAICLSEFLRW 121
                 69*************************87777777777....*****************976 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00018
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlg 30 
                 +a ++lD+d +g +   e+lr+ + +g
  MMETSP1325-20131115|7039_1 100 RALEALDSDDSGAICLSEFLRWWRDHG 126
                 56789****************988877 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.1e-06    0.0047       3      31 .]      63      90 ..      61      90 .. 0.89
   2 !   10.7   0.0   0.00015      0.35       7      30 ..     103     125 ..      99     131 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.1e-06
                H---GCC-------B---HHHHHHH.H-- CS
   PF13405.1  3 reaFklfDkdgdGkidaeELrdaLrkslg 31
                 ++F l+D+dg+G i+a E+  ++r +lg
  MMETSP1325-20131115|7039_1 63 VRIFSLLDRDGTGDINAGEFELLCR-ALG 90
                689*****************99988.776 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00015
                 GCC-------B---HHHHHHH.H- CS
   PF13405.1   7 klfDkdgdGkidaeELrdaLrksl 30 
                 +++D d +G i ++E++++ r ++
  MMETSP1325-20131115|7039_1 103 EALDSDDSGAICLSEFLRWWR-DH 125
                 689***************998.55 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.1   0.00025      0.58      25      47 ..      58      82 ..      45      82 .. 0.75
   2 !   16.0   0.0   2.7e-06    0.0062      14      51 ..      85     122 ..      77     124 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00025
   PF13833.1 25 ee..vdilfrefDtdgdGkisfeEF 47
                ee  v  +f+++D+dg G i+  EF
  MMETSP1325-20131115|7039_1 58 EEreVVRIFSLLDRDGTGDINAGEF 82
                4434999***********9987666 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 2.7e-06
   PF13833.1  14 l.allglkglseeevdilfrefDtdgdGkisfeEFcvll 51 
                 l ++lg++  s+ e    + ++D d++G+i + EF++ +
  MMETSP1325-20131115|7039_1  85 LcRALGKQ-YSKAETARALEALDSDDSGAICLSEFLRWW 122
                 55889***.**************************9765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   2.7e-05     0.061       4      22 ..      65      83 ..      62      86 .. 0.88
   2 !   10.1   0.0   0.00016      0.36       4      22 ..     101     119 ..      99     120 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.7e-05
                HHHHH--S----B-HHHHH CS
   PF13202.1  4 tFrafDlNgDGkIsreELk 22
                +F+ +D +g G I++ E++
  MMETSP1325-20131115|7039_1 65 IFSLLDRDGTGDINAGEFE 83
                6****************97 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00016
                 HHHHH--S----B-HHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELk 22 
                 +++a+D + +G I  +E+ 
  MMETSP1325-20131115|7039_1 101 ALEALDSDDSGAICLSEFL 119
                 489**************95 PP

>> PF03448.12  MgtE intracellular N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.8e-05      0.11      14      66 ..      58     110 ..      44     118 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.8e-05
                 -HHHHHHHHHHS-HHHHHHHHCTS-CCCCCHCCCCS-HHHHHHHHCTS-HHHH CS
  PF03448.12  14 deeeraallrllpkeeaaevleelsedlqeeliealpdeelaelleeldsDda 66 
                 +e+e +++++ll+++  +++ +   e l ++l ++ +++e a++le ldsDd 
  MMETSP1325-20131115|7039_1  58 EEREVVRIFSLLDRDGTGDINAGEFELLCRALGKQYSKAETARALEALDSDDS 110
                 5678899*************9999999************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 737.70
//
Query:       MMETSP1325-20131115|7041_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 634.04
//
Query:       MMETSP1325-20131115|7042_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|7043_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       545  (0.0398625); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 990.49
//
Query:       MMETSP1325-20131115|7044_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       539  (0.0394236); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|7045_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.9e-32  110.5   0.1    9.3e-32  110.3   0.0    1.0  1  PF04188.8 Mannosyltransferase (PIG-V))


Domain annotation for each model (and alignments):
>> PF04188.8  Mannosyltransferase (PIG-V))
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.3   0.0   6.8e-36   9.3e-32     247     400 ..       3     178 ..       1     190 [. 0.80

  Alignments for each domain:
  == domain 1    score: 110.3 bits;  conditional E-value: 6.8e-36
   PF04188.8 247 lpfllfqyygykqfCpgrsagdev..pWCkkslpllYsyiqevywnVGfLkYyelkqiPNFLlAvpviilvvyallyyvksrpelflslG.lqassknkkkekl.............kdlt.....ylsa....dvfvyvvlaalllligcfimHvqvltRlls.alPllyWflahllvk 400
                  p+l+f  yg +++C g+ a   v  +WC   + + Y  iq++ wnVG+L+Y+e+kq PNFLlA+p++ l ++ ++ y +   + +   G +++ + +kk+  +             kd       y s+    ++++++ + a+l l++ +++Hvq+ tRll  a P++yW++a ll+ 
  MMETSP1325-20131115|7045_1   3 APLLAFDSYGKQRLCAGELANARVstAWCADPMSSAYAHIQSTHWNVGLLRYWEVKQAPNFLLAAPILALSAHGIICYAN---WALAETGaVTLIRTRKKHM-IgataetrgnagdaKDAVhladaYASPlhrwELLPHMAHWAVLTLTVLLVAHVQIGTRLLCaACPVVYWHMAWLLGF 178
                 79***************9886666779***************************************************99...4444433134444444432.223345555555553333677886665444489**************************99899********99874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 972.92
//
Query:       MMETSP1325-20131115|7047_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|7046_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 819.55
//
Query:       MMETSP1325-20131115|7050_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-19   68.0   0.1    8.5e-19   68.0   0.1    1.0  1  PF08325.5  WLM domain
  ------ inclusion threshold ------
      0.023   13.7   0.1      0.028   13.4   0.1    1.1  1  PF10023.4  Predicted aminopeptidase (DUF2265)
      0.024   14.3   0.0      0.024   14.3   0.0    1.2  1  PF01863.12 Protein of unknown function DUF45
      0.095   12.5   0.0      0.095   12.5   0.0    1.1  1  PF13688.1  Metallo-peptidase family M84


Domain annotation for each model (and alignments):
>> PF08325.5  WLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.0   0.1   2.5e-22   8.5e-19      45     102 ..       2      65 ..       1      66 [] 0.95

  Alignments for each domain:
  == domain 1    score: 68.0 bits;  conditional E-value: 2.5e-22
   PF08325.5  45 Efepnrkv......llGlNvNkGevIeLrLRtpsdkrflpfesiistllHELaHivqgnHdakF 102
                 E+ p+ +v      +lGlN N+G+ I LrLRt++ k+f++  si+++l HELaH+v+++Hd kF
  MMETSP1325-20131115|7050_1   2 EMWPAGQVgvsevcVLGLNENHGQRILLRLRTDDLKGFRKPLSIKKVLFHELAHNVYSEHDGKF 65 
                 888888888899999************************************************9 PP

>> PF10023.4  Predicted aminopeptidase (DUF2265)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   8.3e-06     0.028     165     188 ..      44      66 .]      39      66 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 8.3e-06
   PF10023.4 165 elarlifHElaHqvvYvkgdtaFN 188
                 ++ +++fHElaH+ vY + d +FN
  MMETSP1325-20131115|7050_1  44 SIKKVLFHELAHN-VYSEHDGKFN 66 
                 57789*******6.7********9 PP

>> PF01863.12  Protein of unknown function DUF45
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     7e-06     0.024     164     184 ..      45      65 ..      21      66 .] 0.91

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 7e-06
  PF01863.12 164 idYVvvHElaHllemnHskrF 184
                 i+ V+ HElaH ++++H  +F
  MMETSP1325-20131115|7050_1  45 IKKVLFHELAHNVYSEHDGKF 65 
                 778**************9999 PP

>> PF13688.1  Metallo-peptidase family M84
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.8e-05     0.095     133     160 ..      36      63 ..       3      66 .] 0.67

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.8e-05
   PF13688.1 133 anvvvststewqvvaHElGHnfGavHDc 160
                  ++  +  +  +v+ HEl Hn  ++HD 
  MMETSP1325-20131115|7050_1  36 LKGFRKPLSIKKVLFHELAHNVYSEHDG 63 
                 455566777889***************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.63
# Mc/sec: 251.05
//
Query:       MMETSP1325-20131115|7048_1  [L=308]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-50  171.6   6.3    1.9e-50  171.4   4.4    1.0  1  PF00909.16 Ammonium Transporter Family


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.4   4.4   1.4e-54   1.9e-50     162     396 ..       2     253 ..       1     256 [. 0.91

  Alignments for each domain:
  == domain 1    score: 171.4 bits;  conditional E-value: 1.4e-54
                 H----------------........--S--GSBHHHHH---HHHH--------------SHHHHH....HHHHHHHHHHHHH-------T..TT--------------------TTT------------------------CHHHHHHTS-HTTGG-----------------TTSTT--.......-----------...-HHHHHHHHHHHHHHH---TTT---HHHHHH---B-XHHHHHXXXHHHHXXX CS
  PF00909.16 162 vagLaaalvlgkregrfe.....gkeeaikghnlpfavlGtllLwfgWfgFNagsaltankrara...raavtTllAaaagaltallisr..lkegkinvlglanGilAGlVAiTaacavvepwgAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv.......askisggllsgeg.kqlvvqligilvilayafvvtlilllllklllgLrvseeeeevglDvaehge 396
                 +++L+++++lg+r g          +ea ++++++f  lG+llLwf WfgFN+ sa+ + ++      ra+v T +A+a g ++ ++is+  l++++i +  ++nGilAGlV+iTa ca+ve+ gA+++G+ ++++  lg + l  kl +dD++++v+vHg++GiwGl+a+g+++ +  +        +++  gl++g g +ql++ ++ +l+ +++++ ++l ++++l+ +  Lrv + +e+vglD+  h e
  MMETSP1325-20131115|7048_1   2 FSALWGVIFLGPRAGVTFteefpRGKEAPQPQSAIFQSLGVLLLWFSWFGFNGCSAMFVFGEGGDvaaRAMVMTAIAGASGCVGSVVISSsiLSQNQILLSSAHNGILAGLVSITACCATVEVEGAFLVGVGSSIVYHLGDQ-LLLKLEVDDVVNAVPVHGFCGIWGLVATGLLSSRTNYrrtfdptLANECCGLFYGCGwEQLGANVVFALALVVWTASTSLPVCYILHRMDALRVVNLDEQVGLDEVLHFE 253
                 689**********9864345666889*****************************98776665556679************9987766542278899********************************************8.*********************************98889*****988888899999888***********************************************99955 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1419.38
//
Query:       MMETSP1325-20131115|7052_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-14   52.3   0.0    6.8e-14   52.0   0.0    1.1  1  PF01230.18 HIT domain
    6.9e-14   51.9   0.0    7.9e-14   51.7   0.0    1.0  1  PF11969.3  Scavenger mRNA decapping enzyme C-term binding


Domain annotation for each model (and alignments):
>> PF01230.18  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.0   9.9e-18   6.8e-14       2      64 ..      29      96 ..      28     104 .. 0.91

  Alignments for each domain:
  == domain 1    score: 52.0 bits;  conditional E-value: 9.9e-18
  PF01230.18  2 teipstvvyeddlvlafldidpkapghlLvipkk..hlselhdlt...eeelakllslvkkvakalqk 64
                +eipst vyeddl++af+di p ap+h+L+ipk    l+ l+ +t   + +l++l++++  +ak+++ 
  MMETSP1325-20131115|7052_1 29 KEIPSTAVYEDDLCYAFRDIAPVAPVHILLIPKSrnGLTMLSAATkehKGILGHLMAVAPVIAKQEGL 96
                79******************************9965699999999888889*************9875 PP

>> PF11969.3  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.0   1.2e-17   7.9e-14       2      77 ..      21      97 ..      20     104 .. 0.91

  Alignments for each domain:
  == domain 1    score: 51.7 bits;  conditional E-value: 1.2e-17
                -HHHHHHTTSS-B-EEEE-SSEEEEE-SS-SSSS-EEEEESS..--SSGGG--TTCCCHHHHHHHHHHHHHHH---- CS
   PF11969.3  2 wvfnkiikekepenvvyedekavvfkDikpkaslHllvipkr.kdikslrdltkehlplLkemrekakkvieekyne 77
                ++f ki  +++p++ vyed+ + +f+Di+p a++H+l ipk+ + ++ l  +tkeh  +L++++ +a  ++++++ +
  MMETSP1325-20131115|7052_1 21 TIFDKILAKEIPSTAVYEDDLCYAFRDIAPVAPVHILLIPKSrNGLTMLSAATKEHKGILGHLMAVAPVIAKQEGLT 97
                799*************************************863689999999***************9999998754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|7051_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-17   60.4   0.4    1.3e-16   59.9   0.3    1.2  1  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   0.3   9.6e-21   1.3e-16       5      81 ..      41     111 ..      37     118 .. 0.92

  Alignments for each domain:
  == domain 1    score: 59.9 bits;  conditional E-value: 9.6e-21
                 HHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHH CS
  PF00153.22   5 vlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaik 81 
                 ++  ++aG++Ag++++lv  Pld++Ktr+q      + k  g+  a  +i++++G++g+yrG++  + r +pa+++ 
  MMETSP1325-20131115|7051_1  41 LVMPFVAGGVAGIAEWLVALPLDTIKTRIQ------AGKAEGFQAAAVEIMRRQGVTGFYRGFGWVMARAIPANGAA 111
                 566799************************......88899********************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.45s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 922.85
//
Query:       MMETSP1325-20131115|7053_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-11   41.7   0.2    6.2e-11   41.5   0.1    1.0  1  PF02423.10 Ornithine cyclodeaminase/mu-crystallin family
     0.0028   17.6   0.0      0.003   17.5   0.0    1.1  1  PF01488.15 Shikimate / quinate 5-dehydrogenase


Domain annotation for each model (and alignments):
>> PF02423.10  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.1     9e-15   6.2e-11     114     181 ..       2      69 ..       1      71 [. 0.96

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 9e-15
                 ------HHHHHS-TT---B--B----HHHHHHHHHHHHS----EEE--SSCHHHHHHHHHHH..H--- CS
  PF02423.10 114 aAvsavaaKyLarkdastlaiiGaGvqaetqlealsavlpieeiriydideeaaekfaenvqefefev 181
                 aAv a+aa  +a+k ++ ++i+G G+qa++ql  l+ v++ +++ +  +++e+ +k+ae ++ ++f+v
  MMETSP1325-20131115|7053_1   2 AAVCALAASQMAPKRVECIGIVGSGIQARFQLALLRDVVSCTKVMVLTRSAEKGRKLAEDMALYGFDV 69 
                 8**********************************************************999888876 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   4.3e-07     0.003      14      56 ..      19      62 ..       6      70 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 4.3e-07
                EEEEE----HHHHHGGG--TT.T-E.EEE----HHHHHHHHHHH CS
  PF01488.15 14 kvlviGAGemarlvakhLlek.gvkkiviaNRtaekakeLaeel 56
                 + ++G G  ar  +  L+    ++k++++ R+aek ++Lae +
  MMETSP1325-20131115|7053_1 19 CIGIVGSGIQARFQLALLRDVvSCTKVMVLTRSAEKGRKLAEDM 62
                5789****************99*******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.43s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|7055_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0043   15.7   0.1     0.0047   15.6   0.1    1.1  1  PF06697.7 Protein of unknown function (DUF1191)
  ------ inclusion threshold ------
      0.091   12.1   0.2       0.13   11.6   0.1    1.2  1  PF06305.6 Protein of unknown function (DUF1049)


Domain annotation for each model (and alignments):
>> PF06697.7  Protein of unknown function (DUF1191)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   6.9e-07    0.0047     196     251 ..      26      79 ..       6      92 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 6.9e-07
   PF06697.7 196 kpkvepegesekeklsrWkvvgsvvgGvvllgl..lavlvvvvvrakrkkkreemerr 251
                 + ++ +    +  ++++W++ + vv G+ +l++  l+v+ ++  r +r++ ++  er+
  MMETSP1325-20131115|7055_1  26 ARDKFG----VVYNSWVWIITLRVVPGLLALVIsyLVVIQLRYERNRRRAVLARYERK 79 
                 333333....26899************9999873355566666777777777777776 PP

>> PF06305.6  Protein of unknown function (DUF1049)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.8e-05      0.13      23      65 ..      39      81 ..      35      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.8e-05
   PF06305.6 23 llliafllGallglLlsvlfllklrrqlrrlqkqlkklekeld 65
                ++++  ++ +ll+l++s l++++lr + +r ++ l+++e++ +
  MMETSP1325-20131115|7055_1 39 WIITLRVVPGLLALVISYLVVIQLRYERNRRRAVLARYERKMA 81
                77777778889****************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       577  (0.042203); expected 273.4 (0.02)
Passed bias filter:                      487  (0.0356202); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 474.66
//
Query:       MMETSP1325-20131115|7056_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        89  (0.00650965); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|7057_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 282.77
//
Query:       MMETSP1325-20131115|7059_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.58   10.4  11.5       0.97    9.7   8.0    1.4  1  PF00428.14 60s Acidic ribosomal protein
          8    6.3   9.1         10    6.0   6.3    1.2  1  PF13801.1  Heavy-metal resistance


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   8.0   0.00014      0.97      50      83 ..       3      37 ..       1      41 [. 0.44

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00014
  PF00428.14 50 aaaaaaaaaaaaaaaaaeeekkeeeee.Eeedddm 83
                aa +aaa + + aaa+ae+ ++e  +e Eeed dm
  MMETSP1325-20131115|7059_1  3 AAQSAAALEREVAAAEAEALEAEVTKElEEEDFDM 37
                33333333333333333333333333346777799 PP

>> PF13801.1  Heavy-metal resistance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   6.3    0.0015        10      56     109 ..       7      61 ..       1      65 [. 0.81

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0015
   PF13801.1  56 earrevralrralraarrellallraepfDpaalraalaeir.earaalqarvee 109
                 +a+ e++ + ++++a ++e+ + l  e+fD   l + l+ei  e++++l+a++++
  MMETSP1325-20131115|7059_1   7 AAALEREVAAAEAEALEAEVTKELEEEDFDMTELGDELDEIDgELDEELEAQIAA 61 
                 44457777788899999999********************953788888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       776  (0.0567583); expected 273.4 (0.02)
Passed bias filter:                      539  (0.0394236); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.44s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|7058_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-17   62.6   1.7    4.3e-17   62.1   1.2    1.1  1  PF09320.6 Domain of unknown function (DUF1977)
  ------ inclusion threshold ------
       0.13   11.9   1.2       0.18   11.5   0.3    1.6  1  PF14345.1 GDYXXLXY protein


Domain annotation for each model (and alignments):
>> PF09320.6  Domain of unknown function (DUF1977)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   1.2   6.3e-21   4.3e-17       3     103 ..      20     135 ..      17     138 .. 0.84

  Alignments for each domain:
  == domain 1    score: 62.1 bits;  conditional E-value: 6.3e-21
   PF09320.6   3 sqlfss.....sPsYslkpsskytikrettklkv....pYyvkkkfeeey..sssklkeleksveedYisnlrnnCekekqqkeqllerar....lfgded...llkkaekmetpsCek 103
                 +++fs      +P++sl+++ +y +kr+t++ +v    +Yyvk+ f ++y  +  +l ++e sv +++ ++lr +C+ ++qq++++  +ar     +   +   l+++a +me++ C +
  MMETSP1325-20131115|7058_1  20 MSFFSYpagntEPAFSLQRTGQYLHKRQTQSRGVrpgiQYYVKEGFGRQYarDRYSLSTVEVSVQQTFHDELRYECQVQTQQQRRMRTKARqmrsPS---EraeLMQRADEMELSGCTE 135
                 555555666679******************986422228***********998899***********************************643223...23559************87 PP

>> PF14345.1  GDYXXLXY protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   2.6e-05      0.18      91     135 ..      37      85 ..      24      92 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.6e-05
   PF14345.1  91 aegevalrgrvr.g.rvkygieryyvpEgkaeelekaryr...aevrvde 135
                 +  +++l  r + +  v+ gi +yyv+Eg ++++ + ry    +ev+v++
  MMETSP1325-20131115|7058_1  37 QRTGQYLHKRQTqSrGVRPGI-QYYVKEGFGRQYARDRYSlstVEVSVQQ 85 
                 445555555444444888897.6****************99888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       776  (0.0567583); expected 273.4 (0.02)
Passed bias filter:                      541  (0.0395699); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 764.79
//
Query:       MMETSP1325-20131115|7063_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|7062_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0025   17.6   0.0       0.43   10.6   0.0    3.5  4  PF02985.17 HEAT repeat
  ------ inclusion threshold ------
      0.083   12.9   0.0        1.3    9.0   0.0    2.1  2  PF08579.6  Mitochondrial ribonuclease P subunit (RPM2)
       0.13   12.3   0.0        0.4   10.8   0.0    1.8  2  PF13646.1  HEAT repeats


Domain annotation for each model (and alignments):
>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.6   7.2e+03      15      29 ..      34      48 ..      31      50 .. 0.69
   2 !   10.6   0.0   9.4e-05      0.43       2      28 ..      62      88 ..      61      91 .. 0.89
   3 ?    1.0   0.0      0.12   5.3e+02       1      25 [.     103     127 ..     103     130 .. 0.85
   4 ?    1.0   0.0      0.12   5.4e+02       3      19 ..     140     156 ..     138     165 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.6
                HHHHHHHHHHHHHHH CS
  PF02985.17 15 eVReaAaeaLgalae 29
                +V + +++aL+ ++e
  MMETSP1325-20131115|7062_1 34 NVQNGVLKALSFMFE 48
                677778888876665 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 9.4e-05
                HHHHHHHHTSSSHHHHHHHHHHHHHHH CS
  PF02985.17  2 lPlllkllnDpspeVReaAaeaLgala 28
                 Pll+ +l D +   R++Aa+++  +a
  MMETSP1325-20131115|7062_1 62 APLLEDALMDRDMVHRQTAATTVKHVA 88
                69*******************998876 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.12
                 HHHHHHHHHTSSSHHHHHHHHHHHH CS
  PF02985.17   1 llPlllkllnDpspeVReaAaeaLg 25 
                 ll++++ +   +sp+V +a +ea+ 
  MMETSP1325-20131115|7062_1 103 LLNFIWPNVFETSPHVINAIFEAIE 127
                 7899999999999***999999986 PP

  == domain 4    score: 1.0 bits;  conditional E-value: 0.12
                 HHHHHHHTSSSHHHHHH CS
  PF02985.17   3 PlllkllnDpspeVRea 19 
                  +++++l +p+ +VR+ 
  MMETSP1325-20131115|7062_1 140 QYVMQGLYHPARRVRDV 156
                 67889999******975 PP

>> PF08579.6  Mitochondrial ribonuclease P subunit (RPM2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.06   2.8e+02      54      71 ..      26      43 ..      21      46 .. 0.89
   2 ?    9.0   0.0   0.00029       1.3      42      92 ..     117     167 ..     100     169 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.06
   PF08579.6 54 ndlkvpsievyekvLksi 71
                n+ +vp+++v + vLk++
  MMETSP1325-20131115|7062_1 26 NEYRVPELNVQNGVLKAL 43
                8899***********997 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00029
   PF08579.6  42 nkinalYqalkRndlkvpsievyekvLksivkReldnddienklteLLtvY 92 
                   ina+++a+   +++v +++v++ v++ + +      d+  kl++ L +Y
  MMETSP1325-20131115|7062_1 117 HVINAIFEAIEGITVAVGPVKVFQYVMQGLYHPARRVRDVYWKLFNTLYIY 167
                 579***************************998888889999999988888 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   8.7e-05       0.4      16      68 ..      35     104 ..      21     118 .. 0.69
   2 ?   -1.6   0.0      0.66     3e+03      14      47 ..     116     153 ..     110     156 .. 0.44

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 8.7e-05
   PF13646.1  16 vraaaieaLg.......qlgse...ealpaLlelLkdsdpevRraAaeaLgkl.......gdpealpaLl 68 
                 v+  +++aL+       ++g +   ++ p+L ++L d d   R++Aa     +       g ++++++Ll
  MMETSP1325-20131115|7062_1  35 VQNGVLKALSfmfeyigEMGKDyvyAIAPLLEDALMDRDMVHRQTAATTVKHValgvaglGCEDSIQHLL 104
                 555566666655554447777666667999999**************98775533333223467777775 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.66
   PF13646.1  14 pevraaaieaLg....qlgseealpaLlelLkdsdpev 47 
                 p+v  a+ ea+       g  ++ + + + L ++  +v
  MMETSP1325-20131115|7062_1 116 PHVINAIFEAIEgitvAVGPVKVFQYVMQGLYHPARRV 153
                 44444444444422222233344444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 910.62
//
Query:       MMETSP1325-20131115|7061_1  [L=344]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-24   84.3   9.6    7.9e-12   44.5   0.3    2.3  2  PF00013.24 KH domain
    7.6e-15   54.0   4.8    1.3e-06   27.8   0.1    2.5  2  PF13014.1  KH domain
    1.5e-07   30.7   3.0     0.0045   16.4   0.0    2.5  2  PF07650.12 KH domain
     0.0018   17.9   0.9        1.2    8.8   0.0    2.4  2  PF13184.1  NusA-like KH domain
  ------ inclusion threshold ------
      0.013   15.0   3.1        1.4    8.5   0.1    2.5  2  PF13083.1  KH domain
      0.045   12.3   2.3      0.058   11.9   1.6    1.1  1  PF10446.4  Protein of unknown function (DUF2457)
        2.5    8.0   6.7        4.1    7.3   4.7    1.3  1  PF08432.5  Fungal protein of unknown function (DUF1742)


Domain annotation for each model (and alignments):
>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   2.3   8.9e-15   1.7e-11       8      55 ..      10      55 ..       6      58 .. 0.93
   2 !   44.5   0.3     4e-15   7.9e-12       9      58 .]      86     139 ..      85     139 .. 0.91

  Alignments for each domain:
  == domain 1    score: 43.4 bits;  conditional E-value: 8.9e-15
                CCCCHHH---TTHHHHHHHHHHT-EEEE--SE.EEEEEESHHHHHHHH CS
  PF00013.24  8 nskigriIGkgGsnIkeIeeetgakIdvpkdrdtvtisGdpesvekAk 55
                n +i +iIGkgG +Ik I+e+tga +d+    d+v+++G++e+ve+Ak
  MMETSP1325-20131115|7061_1 10 NGHIAAIIGKGGVTIKGIREKTGAAVDLIG--DMVKLTGTQEAVEAAK 55
                6799************************77..6**************8 PP

  == domain 2    score: 44.5 bits;  conditional E-value: 4e-15
                 CCCHHH---TTHHHHHHHHHHT-EEEE--S...E..EEEEEESHHHHHHHHHHH CS
  PF00013.24   9 skigriIGkgGsnIkeIeeetgakIdvpkd...r.dtvtisGdpesvekAkkli 58 
                 + +g +IG++G +I+ I+ee+ga+ d++++   +   +++ G pe+vekAk++i
  MMETSP1325-20131115|7061_1  86 DAVGMVIGRQGTMIRTIKEESGADLDISREnsgEvSLCRVFGKPECVEKAKAAI 139
                 579************************877775377***************987 PP

>> PF13014.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.8   8.6e-10   1.7e-06       1      43 []      12      46 ..      12      46 .. 0.87
   2 !   27.8   0.1   6.7e-10   1.3e-06       2      36 ..      88     119 ..      87     127 .. 0.86

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 8.6e-10
   PF13014.1  1 lvgliIGkgGetIkeIreetGakIrfpkeaspgsnereitIrG 43
                ++ +iIGkgG tIk Ire+tGa ++           + + ++G
  MMETSP1325-20131115|7061_1 12 HIAAIIGKGGVTIKGIREKTGAAVDLIG--------DMVKLTG 46
                6889*******************99877........6666665 PP

  == domain 2    score: 27.8 bits;  conditional E-value: 6.7e-10
   PF13014.1   2 vgliIGkgGetIkeIreetGakIrfpkeaspgsne 36 
                 vg +IG++G  I+ I ee+Ga  ++++    +s+e
  MMETSP1325-20131115|7061_1  88 VGMVIGRQGTMIRTIKEESGADLDISR---ENSGE 119
                 89*************************...44443 PP

>> PF07650.12  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.6   1.2e-05     0.024      33      61 ..      10      38 ..       6      59 .. 0.87
   2 !   16.4   0.0   2.3e-06    0.0045      36      59 ..      88     111 ..      86     125 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.2e-05
                ESCCCCC------HHHHHHHHHHHHCHHC CS
  PF07650.12 33 esqpgivIGkgGsnikklgkelrkriekl 61
                +++++ +IGkgG +ik ++++ +  ++++
  MMETSP1325-20131115|7061_1 10 NGHIAAIIGKGGVTIKGIREKTGAAVDLI 38
                68999****************99998744 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 2.3e-06
                 CCCC------HHHHHHHHHHHHCH CS
  PF07650.12  36 pgivIGkgGsnikklgkelrkrie 59 
                  g+vIG++G +i+++++e + +++
  MMETSP1325-20131115|7061_1  88 VGMVIGRQGTMIRTIKEESGADLD 111
                 69*****************99985 PP

>> PF13184.1  NusA-like KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.1     0.002       3.8      19      45 ..      13      38 ..       5      46 .. 0.88
   2 !    8.8   0.0   0.00061       1.2      17      36 ..      86     105 ..      79     116 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.002
   PF13184.1 19 vgaivgkkgsrikaisseLngekidvv 45
                + ai+gk+g  ik i ++  g  +d++
  MMETSP1325-20131115|7061_1 13 IAAIIGKGGVTIKGIREKT-GAAVDLI 38
                89****************9.9998887 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00061
   PF13184.1  17 Dpvgaivgkkgsrikaisse 36 
                 D+vg+ +g+ g+ i++i +e
  MMETSP1325-20131115|7061_1  86 DAVGMVIGRQGTMIRTIKEE 105
                 9****************987 PP

>> PF13083.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2    0.0026       5.1      39      56 ..      12      29 ..       3      45 .. 0.82
   2 ?    8.5   0.1   0.00071       1.4      37      54 ..      85     102 ..      81     104 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0026
   PF13083.1 39 dlGrlIGkrGktldALqy 56
                +++ +IGk G t++ ++ 
  MMETSP1325-20131115|7061_1 12 HIAAIIGKGGVTIKGIRE 29
                5789**********9995 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00071
   PF13083.1  37 gedlGrlIGkrGktldAL 54 
                 g+ +G +IG++G +++ +
  MMETSP1325-20131115|7061_1  85 GDAVGMVIGRQGTMIRTI 102
                 5789**********9876 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.6     3e-05     0.058      22     129 ..     133     243 ..     127     304 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3e-05
   PF10446.4  22 lkeklTlndtlkkelairklgeeae.eealeeedededdeeddddeDeddddddddeDdedde...lddddstladaseaddGnktdneagfadSdDedddgseyefWapka 129
                  k+k  + + l++ ++++  + e+  e+a+++  +++ ++e ++ + e +d++    Dd + e    + ++s    a+ a+dG   +   g  d+d   d g  ye    +a
  MMETSP1325-20131115|7061_1 133 EKAKAAIAEILERHKQMKXAAGEVReEQAAKKAAKEQAEGEGSEGDAEGEDNEATGGDDGEGEaapAKAAESAKPVAEPATDGATKEAGGGW-DADPSADMGVXYERLVVGA 243
                 57889999999999999987766651555555533333333333333333333222222222222344555555555568999755555555.8888888888877555555 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   4.7    0.0021       4.1      55     126 ..     137     206 ..     124     220 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0021
   PF08432.5  55 aeaeeakkkkkelkeeiekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekekekeeeekaeelk 126
                 a+ +e  +++k++k    +v++e ++k+ ak++++ + +e d+e e+++ + +d+ e e  ++++++++  k
  MMETSP1325-20131115|7061_1 137 AAIAEILERHKQMKXAAGEVREEQAAKKAAKEQAEGEGSEGDAEGEDNEATGGDDGEGEAAPAKAAESA--K 206
                 333445578888888888888888888888888888888888866666555556655555555444433..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.55
# Mc/sec: 1498.81
//
Query:       MMETSP1325-20131115|7064_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       698  (0.0510532); expected 273.4 (0.02)
Passed bias filter:                      493  (0.0360591); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|7065_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|7067_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-08   32.7   0.0    7.9e-06   25.2   0.1    2.1  2  PF00432.16 Prenyltransferase and squalene oxidase repeat


Domain annotation for each model (and alignments):
>> PF00432.16  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   5.7e-10   7.9e-06      18      44 .]       3      29 ..       3      29 .. 0.99
   2 !    5.8   0.0   0.00067       9.1       7      25 ..      40      59 ..      37      60 .] 0.88

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 5.7e-10
                ---BS-TCCCCSCCCHHHHHHHHHHHH CS
  PF00432.16 18 GGwggrpgsesdtyytywalaaLallG 44
                GG++gr ++ +dt+y++w+ ++L+llG
  MMETSP1325-20131115|7067_1  3 GGFQGRVNKVADTCYSFWVGGTLKLLG 29
                9*************************8 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.00067
                HHHHHHHSH.-----BS-TC CS
  PF00432.16  7 vdfLlscQn.pdGGwggrpg 25
                ++f+l c   + GG++  p+
  MMETSP1325-20131115|7067_1 40 TEFVLMCEKkYTGGFSKTPD 59
                799****999*****99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 252.25
//
Query:       MMETSP1325-20131115|7066_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-16   59.8   0.5    3.5e-12   45.6   0.0    2.3  2  PF13414.1  TPR repeat
    2.3e-12   45.6   0.5      0.007   16.0   0.1    3.4  3  PF07719.12 Tetratricopeptide repeat
    6.6e-12   44.3   0.1    0.00047   19.5   0.0    3.4  3  PF00515.23 Tetratricopeptide repeat
    7.1e-06   26.4   7.6     0.0002   21.8   0.1    2.5  2  PF13432.1  Tetratricopeptide repeat
    2.6e-05   23.8   5.3      0.026   14.2   0.1    2.7  3  PF13371.1  Tetratricopeptide repeat
    2.7e-05   23.5   0.8       0.46   10.2   0.0    3.4  3  PF13176.1  Tetratricopeptide repeat
    4.9e-05   23.0   1.5     0.0043   16.8   0.1    3.0  2  PF13424.1  Tetratricopeptide repeat
    0.00021   21.5   7.3        2.8    8.7   1.2    3.5  3  PF13428.1  Tetratricopeptide repeat
    0.00022   21.4   1.2       0.24   11.5   0.0    2.9  3  PF03704.12 Bacterial transcriptional activator domain
  ------ inclusion threshold ------
       0.06   13.4   0.0       0.23   11.6   0.0    2.1  2  PF13431.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.0   2.6e-15   3.5e-12       6      67 ..      27      87 ..      23      92 .. 0.94
   2 !   12.2   0.1     7e-05     0.095      42      69 .]     166     192 ..     160     199 .. 0.62

  Alignments for each domain:
  == domain 1    score: 45.6 bits;  conditional E-value: 2.6e-15
   PF13414.1  6 lkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                lk+++ a f +gd+  A ++y+ Al ++p   ++ +n+A+++l lg+  ++A++d++ Al+l
  MMETSP1325-20131115|7066_1 27 LKRQADASFGQGDLTSAAKLYTDALTIEPTFVSAISNRAACHLALGD-MKQAVKDCTDALAL 87
                899*******************************************6.69*********987 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 7e-05
   PF13414.1  42 nlAlaylklgkdyeeAledyekAleldP 69 
                 ++++a  klg d  +A+edy+ A +ldP
  MMETSP1325-20131115|7066_1 166 RRGAAKAKLG-DLASAAEDYRVAAALDP 192
                 5666666666.35666666666666665 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   4.4e-05      0.06       5      33 ..      28      56 ..      25      57 .. 0.93
   2 !   13.0   0.0   4.9e-05     0.066       4      30 ..      61      87 ..      58      89 .. 0.92
   3 !   16.0   0.1   5.1e-06     0.007       6      34 .]     166     194 ..     162     194 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.4e-05
                HHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  5 ynlGlayyklgdyeeAleafekAleldPn 33
                 ++++a + +gd+  A++++  Al ++P+
  MMETSP1325-20131115|7066_1 28 KRQADASFGQGDLTSAAKLYTDALTIEPT 56
                6899***********************98 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 4.9e-05
                HHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  4 lynlGlayyklgdyeeAleafekAlel 30
                  n++ ++++lgd ++A++++  Al+l
  MMETSP1325-20131115|7066_1 61 ISNRAACHLALGDMKQAVKDCTDALAL 87
                679**********************98 PP

  == domain 3    score: 16.0 bits;  conditional E-value: 5.1e-06
                 HHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAleldPnn 34 
                 ++G a +klgd++ A+e+++ A +ldP +
  MMETSP1325-20131115|7066_1 166 RRGAAKAKLGDLASAAEDYRVAAALDPSD 194
                 899************************86 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00073      0.99       6      34 .]      29      57 ..      27      57 .. 0.88
   2 !   19.5   0.0   3.4e-07   0.00047       3      30 ..      60      87 ..      58      89 .. 0.92
   3 !   12.1   0.0   7.4e-05       0.1       6      34 .]     166     194 ..     162     194 .. 0.92

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00073
                HHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  6 nlGnaylklgkydeAleyyekALelnPnn 34
                + + a + +g++  A + y  AL+++P++
  MMETSP1325-20131115|7066_1 29 RQADASFGQGDLTSAAKLYTDALTIEPTF 57
                66777789*******************96 PP

  == domain 2    score: 19.5 bits;  conditional E-value: 3.4e-07
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23  3 alynlGnaylklgkydeAleyyekALel 30
                a  n+++++l lg+ ++A++++  AL l
  MMETSP1325-20131115|7066_1 60 AISNRAACHLALGDMKQAVKDCTDALAL 87
                668***********************87 PP

  == domain 3    score: 12.1 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   6 nlGnaylklgkydeAleyyekALelnPnn 34 
                 ++G+a  klg++  A e+y+ A  l+P++
  MMETSP1325-20131115|7066_1 166 RRGAAKAKLGDLASAAEDYRVAAALDPSD 194
                 89******************999999986 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   1.5e-07    0.0002       2      56 ..      29      83 ..      28      95 .. 0.90
   2 !    6.6   2.0    0.0082        11      37      65 .]     167     195 ..     165     195 .. 0.89

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 1.5e-07
   PF13432.1  2 alArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallra 56
                ++A+a + +Gd+  A++++ +al  +P  + a  ++a ++l+lg+ ++A++    
  MMETSP1325-20131115|7066_1 29 RQADASFGQGDLTSAAKLYTDALTIEPTFVSAISNRAACHLALGDMKQAVKDCTD 83
                589**********************************************965555 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0082
   PF13432.1  37 laeallrlgrldeAaallraalalaPddp 65 
                 ++ a ++lg+l+ Aa+ +r a+al+P+d+
  MMETSP1325-20131115|7066_1 167 RGAAKAKLGDLASAAEDYRVAAALDPSDE 195
                 67788999******************986 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1   1.9e-05     0.026      10      66 ..      39      95 ..      33     100 .. 0.83
   2 !   10.9   0.7   0.00021      0.29      35      67 ..     167     199 ..     162     205 .. 0.89
   3 ?   -1.1   0.0       1.1   1.6e+03      50      68 ..     199     217 ..     198     220 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.9e-05
   PF13371.1 10 dferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapdae 66
                d  +A + +   l + P  ++ +  r+ ++  lg++ +A++d + +l+l + +p+a 
  MMETSP1325-20131115|7066_1 39 DLTSAAKLYTDALTIEPTFVSAISNRAACHLALGDMKQAVKDCTDALALLEVDPAAL 95
                5556666666677888899999*************************9999888886 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00021
   PF13371.1  35 rGlllaqlgclaaAaedLeaflelcpdapdael 67 
                 rG + a+lg+la Aaed++ +++l+p++++ ++
  MMETSP1325-20131115|7066_1 167 RGAAKAKLGDLASAAEDYRVAAALDPSDENLQR 199
                 9*************************9987665 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 1.1
   PF13371.1  50 edLeaflelcpdapdaeli 68 
                 +dL++  ++c++a + e +
  MMETSP1325-20131115|7066_1 199 RDLQTLTKQCEEAKQKEEL 217
                 699********99887765 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0071       9.7       6      32 ..      31      55 ..      27      59 .. 0.81
   2 !   10.2   0.0   0.00034      0.46       1      31 [.      60      91 ..      60      93 .. 0.85
   3 ?    3.8   0.1     0.038        53       8      35 ..     170     195 ..     163     197 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0071
   PF13176.1  6 arlysrlgdyekAielyeraLaltkdp 32
                a++ + +gd   A++ly+   alt +p
  MMETSP1325-20131115|7066_1 31 ADASFGQGDLTSAAKLYTD--ALTIEP 55
                7777889************..777766 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00034
   PF13176.1  1 allnLarlysrlgdyekAielyeraL.altkd 31
                a++n a ++ +lgd+++A++ ++ aL  l+ d
  MMETSP1325-20131115|7066_1 60 AISNRAACHLALGDMKQAVKDCTDALaLLEVD 91
                678999******************99555555 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.038
   PF13176.1   8 lysrlgdyekAielyeraLaltkdplda 35 
                 +  +lgd   A+e y+   a + dp+d+
  MMETSP1325-20131115|7066_1 170 AKAKLGDLASAAEDYRV--AAALDPSDE 195
                 56789************..666666654 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   3.1e-06    0.0043      12      76 ..      31      88 ..      27      90 .. 0.80
   2 ?    3.2   0.1     0.054        73      45      75 ..     160     190 ..     155     193 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.1e-06
   PF13424.1 12 alvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                a++ + +gd+ +A +ly  al++        p  ++a  n a ++lalgd ++A++   +Al++ 
  MMETSP1325-20131115|7066_1 31 ADASFGQGDLTSAAKLYTDALTIE-------PTFVSAISNRAACHLALGDMKQAVKDCTDALALL 88
                5666789****************7.......6678888888888888888888888777777765 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.054
   PF13424.1  45 taralnnlanlylalgdydeAleylekAlei 75 
                 ++++    + ++++lgd+++A e ++ A ++
  MMETSP1325-20131115|7066_1 160 VLKTIARRGAAKAKLGDLASAAEDYRVAAAL 190
                 5566666677788888888888888877776 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0027       3.7       7      39 ..      30      62 ..      26      67 .. 0.82
   2 !    7.3   0.1    0.0056       7.6       3      37 ..      60      94 ..      58     100 .. 0.82
   3 !    8.7   1.2    0.0021       2.8       3      40 ..     163     200 ..     161     204 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0027
   PF13428.1  7 larallalGdpdeAiallrralalaPddaeall 39
                 a+a + +Gd+  A++l+ +al   P+   a  
  MMETSP1325-20131115|7066_1 30 QADASFGQGDLTSAAKLYTDALTIEPTFVSAIS 62
                57888899*****************99877765 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0056
   PF13428.1  3 allalarallalGdpdeAiallrralalaPddaea 37
                a   +a+ +lalGd ++A++ + +alal   d++a
  MMETSP1325-20131115|7066_1 60 AISNRAACHLALGDMKQAVKDCTDALALLEVDPAA 94
                677899*******************9986655555 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.0021
   PF13428.1   3 allalarallalGdpdeAiallrralalaPddaealll 40 
                 + +++++a + lGd++ A++ +r a+al+P+d+ +++ 
  MMETSP1325-20131115|7066_1 163 TIARRGAAKAKLGDLASAAEDYRVAAALDPSDENLQRD 200
                 5688999*************************988865 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.26   3.5e+02       5      34 ..      23      52 ..      21      53 .. 0.89
   2 !    7.3   0.0    0.0036       4.9      46      91 ..      42      87 ..      37      96 .. 0.83
   3 !   11.5   0.0   0.00017      0.24      60     102 ..     159     201 ..     144     219 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.26
  PF03704.12  5 rferlvaagrralaagdpeeaarlleaala 34
                r+ +l++++++++ +gd ++aa+l+++al 
  MMETSP1325-20131115|7066_1 23 RCSDLKRQADASFGQGDLTSAAKLYTDALT 52
                67789999******************9985 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0036
  PF03704.12 46 agpwleaererleelrlealealieadlrlgrheellaelealval 91
                +   l + +  +e  +++a+  +++++l+lg+ ++++++ ++++al
  MMETSP1325-20131115|7066_1 42 SAAKLYTDALTIEPTFVSAISNRAACHLALGDMKQAVKDCTDALAL 87
                556667778889999***********************99998876 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 0.00017
  PF03704.12  60 lrlealealieadlrlgrheellaelealvalhPlrErlhrql 102
                   l++++++ +a+++lg+ ++++++++ ++al+P +E+l+r l
  MMETSP1325-20131115|7066_1 159 WVLKTIARRGAAKAKLGDLASAAEDYRVAAALDPSDENLQRDL 201
                 66888999********************************987 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00017      0.23       1      33 [.      46      78 ..      46      79 .. 0.94
   2 ?   -3.7   0.0        10   1.4e+04       2      12 ..     184     194 ..     184     197 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00017
   PF13431.1  1 lyekaleldPnnadaynnLAelllnnGdleeAe 33
                ly  al ++P+ + a  n+A ++l++Gd ++A 
  MMETSP1325-20131115|7066_1 46 LYTDALTIEPTFVSAISNRAACHLALGDMKQAV 78
                799*************************99986 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 10
   PF13431.1   2 yekaleldPnn 12 
                 y+ a +ldP +
  MMETSP1325-20131115|7066_1 184 YRVAAALDPSD 194
                 66788999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       788  (0.057636); expected 273.4 (0.02)
Passed bias filter:                      561  (0.0410328); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.70u 0.38s 00:00:01.08 Elapsed: 00:00:00.65
# Mc/sec: 1205.55
//
Query:       MMETSP1325-20131115|7068_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-28   98.1   0.0      4e-28   97.8   0.0    1.1  1  PF00501.23 AMP-binding enzyme
    8.5e-09   34.5   0.0    1.6e-08   33.6   0.0    1.4  1  PF13193.1  Domain of unknown function (DUF4009)


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   0.0   5.8e-32     4e-28     338     418 .]       2      81 ..       1      81 [. 0.99

  Alignments for each domain:
  == domain 1    score: 97.8 bits;  conditional E-value: 5.8e-32
                 EEEESTTS--B-TT-HHHHHHHBCCSTTEEE---EEEE-TT--EEEE--GGGEEE----EEEHHHHHHHHHTSTTEEEEEE CS
  PF00501.23 338 llirgpgvakGYlkdpeltaeafdedgwlyrTGDlgrldedGyleiiGRkkdqikirGeniepgeiEsallehpgvaeaaV 418
                 +l+rgp+v++GYl+++e+t   +d+dgw + TGD+g++ +dG++++++R k++ik +G+++ p+e+E+ ll+hp+v ++aV
  MMETSP1325-20131115|7068_1   2 ILCRGPNVMLGYLNNKEATDGCLDSDGW-LSTGDIGYISDDGHVFLTDRLKELIKFKGFQVPPAELEALLLTHPAVGDCAV 81 
                 899*************************.**************************************************98 PP

>> PF13193.1  Domain of unknown function (DUF4009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   2.4e-12   1.6e-08       7      36 ..     128     159 ..     126     163 .. 0.86

  Alignments for each domain:
  == domain 1    score: 33.6 bits;  conditional E-value: 2.4e-12
   PF13193.1   7 veFVdeLPKTrSGKIlRRlLRaial.ge.gdp 36 
                 v+F d++PK++SGKIlRR L a  + ge gd 
  MMETSP1325-20131115|7068_1 128 VIFIDQIPKSASGKILRRMLVARDKeGEfGDH 159
                 89******************776676777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|7069_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 764.79
//
Query:       MMETSP1325-20131115|7070_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|7060_1  [L=792]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-40  139.7   0.0    1.4e-40  139.3   0.0    1.2  1  PF00155.16 Aminotransferase class I and II
    1.8e-07   29.9   0.0    2.7e-07   29.4   0.0    1.2  1  PF12897.2  Alanine-glyoxylate amino-transferase
     0.0043   15.2   0.0     0.0075   14.4   0.0    1.3  1  PF01053.15 Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.3   0.0     3e-44   1.4e-40      65     363 .]     302     608 ..     254     608 .. 0.90

  Alignments for each domain:
  == domain 1    score: 139.3 bits;  conditional E-value: 3e-44
                 TT-EEEE--------HHHHHCCHHHHSS--EEEEECS--TCHHHHHHH---EEEEEE-EET....TTTEE-HHHHHHHHTT--SS-E...EEE-SSS-S-------HHHHHHHHHHHHHT.T-EEEEEES-------.-HHHHHHHHHHH-S-EEEEE--CCCCTBGGG----EEEE-HHHHHHHHHCCTTTS..-----CCHHHHCTSHHHHHHHHHHHHHHHHHHHHHHHHCC.CC-TCHHHH----EE-----HH..............HHHCCH---BE--...............---EE-----TTTHHHHHHHH CS
  PF00155.16  65 lkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvryplyse....edfhldlealeealkeapegnkktkvvlvesphNPtGtvatleeleklldlakky.nlllfvDeaYagfvfgsldavatranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpfls..ssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLaelglkvlasqsgmflltdlsae........takelskkLleevgvyvtpgtsftv.......pgrlRitvAglteeeleelveal 363
                 l+r+  v+v+ G +++i ++  ++  +pgd++++ +p y+ +   + l g+++v +++++     +++  d  +l +al++a       +++++++p+ PtGt ++ +el  l+++   y  +l++ De+Y +  +++ +++  ++ v ++  +l v s +K+f+++G+RvG+i+g +++v   r +++++++  ++++q+a+aa   d  +   +++++ + l+k+  +l++ L+++g+kv  +++g+f++ +++ +        ++ el+k L+ evgv  +p t+f++       + +lR+ + + +++++  ++e+l
  MMETSP1325-20131115|7060_1 302 LTRD-GVLVTVGGQEAIYTALSAW-TDPGDKVVALTPCYDGIFASASLQGVKMVGVETRPGddvgQSWAWDEAELRAALEDA-------RIFYITNPSAPTGTCYSADELNRLAAVLADYpDVLVLADEVYHHAILDGAEYTH-VSSVLRD-RTLSVFSAGKSFSCTGWRVGFIAGPPELVGPCRLVHTAINFcpTTPVQHALAALYADGFQN--FVQTNCAVLNKKCAKLCAVLDKAGFKVHRPDAGYFVVAEVPTSlraragtdDDVELAKWLTMEVGVTALPLTPFYTeppsdpsRVFLRFAF-CKDDATIGLAAERL 608
                 5578.9******************.7*******************************9988777777888888888888863.......59**********************************************665544.5555554.46*******************************************************8865..**************************************************999**************************9966669*****.******99999986 PP

>> PF12897.2  Alanine-glyoxylate amino-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   5.9e-11   2.7e-07     119     276 ..     324     475 ..     303     585 .. 0.67

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 5.9e-11
   PF12897.2 119 wvkeekvkllvtvpGydrhfllletlGielltvdlqddGpdvdav......e.rlvaedasvkGilavpkysnpgGetisaekarrlaalkaaapdfrifaddayrvhdlvaeedkdapvnivalardaGhpdraf.vfastskitfagaGlgfvassedniawls 276
                 w++ +  k++  +p yd  f+     G++++ v+ ++ G dv +       e r + eda    i+ + + s p+G+++sa+   rlaa+ a  pd  ++ad+ y   + + ++ + + v  v         dr++ vf++    + +g  +gf+a  ++ +    
  MMETSP1325-20131115|7060_1 324 WTD-PGDKVVALTPCYDGIFASASLQGVKMVGVETRP-GDDVGQSwawdeaElRAALEDA---RIFYITNPSAPTGTCYSADELNRLAAVLADYPDVLVLADEVYH--HAILDGAEYTHVSSV--L-----RDRTLsVFSAGKSFSCTGWRVGFIAGPPELVGPCR 475
                 544.4789999***********************997.6666543111110212222344...47899999**********************************5..444566665533332..2.....34443144444444555555666666666665555 PP

>> PF01053.15  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   1.7e-06    0.0075      73     183 ..     307     426 ..     302     431 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.7e-06
                 EE-B----HHHHHHHHCCS----EEEEESS----HHHHHH.CCHHH---EEEEEST......TCHHHHHHHTTTTEEEEEEESSBTTTTB--...-HHHHHHHHHHCSS-EEEEE-TTTHH CS
  PF01053.15  73 alavsSGmaAiaaallallkaGdevvatddlYggtqrlle.kvlkklgvevkfvdt......sdleelekaikpntklvylEtptnpllkvv...DieaiaklakkkgdvlvvvDntfasp 183
                 +l++  G+ Ai +al a  + Gd+vva + +Y g ++  + + +k +gve++  d        d +el++a++ + +++y+  p+ p+  +     ++++a++  +  dvlv+ D ++  +
  MMETSP1325-20131115|7060_1 307 VLVTVGGQEAIYTALSAWTDPGDKVVALTPCYDGIFASASlQGVKMVGVETRPGDDvgqswaWDEAELRAALE-DARIFYITNPSAPTGTCYsadELNRLAAVLADYPDVLVLADEVYHHA 426
                 678889****************************8887761455569***99988766555557778888775.689*********98655411147777777777779999999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (792 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.14u 0.33s 00:00:01.47 Elapsed: 00:00:00.69
# Mc/sec: 2750.60
//
Query:       MMETSP1325-20131115|7071_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 298.32
//
Query:       MMETSP1325-20131115|7073_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 420.49
//
Query:       MMETSP1325-20131115|7074_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 497.36
//
Query:       MMETSP1325-20131115|7072_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-21   73.5   3.8    0.00091   19.2   0.0    7.0  7  PF13812.1  Pentatricopeptide repeat domain
    1.4e-18   65.4   0.0    0.00026   20.6   0.0    6.7  7  PF01535.15 PPR repeat
    1.7e-18   66.1   0.0     0.0018   18.0   0.0    5.8  6  PF13041.1  PPR repeat family
    3.1e-05   23.2   6.2       0.68    9.3   0.0    5.9  6  PF12854.2  PPR repeat
     0.0011   18.6   0.6         18    5.4   0.0    5.1  5  PF07719.12 Tetratricopeptide repeat
     0.0013   18.1   3.6       0.58    9.7   0.0    3.8  4  PF13414.1  TPR repeat
     0.0014   18.9  14.8        2.7    8.7   0.1    6.6  6  PF13428.1  Tetratricopeptide repeat
      0.002   17.6   1.7         14    5.6   0.0    5.2  6  PF13176.1  Tetratricopeptide repeat
     0.0041   17.3   4.4         78    3.9   0.0    5.4  5  PF13174.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.018   13.9   0.6        0.6    8.9   0.0    2.7  2  PF13429.1  Tetratricopeptide repeat
      0.092   12.9   2.3       0.55   10.4   0.0    3.0  3  PF03704.12 Bacterial transcriptional activator domain
       0.36   11.4   0.0       0.36   11.4   0.0    5.2  7  PF13432.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00078      0.89      15      34 .]       5      24 ..       2      24 .. 0.89
   2 ?    5.8   0.0     0.015        17       2      25 ..      27      51 ..      26      52 .. 0.90
   3 !   19.2   0.0     8e-07   0.00091       2      29 ..      60      87 ..      59      92 .. 0.92
   4 !    6.8   0.0    0.0072       8.2       2      31 ..      96     125 ..      95     129 .. 0.86
   5 !   15.7   0.0     1e-05     0.011       3      28 ..     133     158 ..     132     160 .. 0.93
   6 ?   -0.6   0.0       1.7   1.9e+03      20      31 ..     188     199 ..     172     201 .. 0.72
   7 !    9.9   0.0   0.00077      0.88       2      26 ..     206     230 ..     205     237 .. 0.89

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00078
   PF13812.1 15 grpeaAlalleeMeqqgvkP 34
                g+ ++Alall+ Me++gv+P
  MMETSP1325-20131115|7072_1  5 GQGARALALLRSMERAGVEP 24
                55679**************9 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.015
   PF13812.1  2 etyntlitalak.sgrpeaAlalle 25
                +ty + +tal +  g++e+Al+ll+
  MMETSP1325-20131115|7072_1 27 VTYCSAATALGNdGGQWERALELLD 51
                89*********659*********97 PP

  == domain 3    score: 19.2 bits;  conditional E-value: 8e-07
   PF13812.1  2 etyntlitalaksgrpeaAlalleeMeq 29
                + +n  i a++k g+p +Al++l+ M+q
  MMETSP1325-20131115|7072_1 60 RAFNVAISACVKGGQPRKALQILDLMRQ 87
                689************************9 PP

  == domain 4    score: 6.8 bits;  conditional E-value: 0.0072
   PF13812.1   2 etyntlitalaksgrpeaAlalleeMeqqg 31 
                 +t+   ++a++  +++ +Al+l++e+ + g
  MMETSP1325-20131115|7072_1  96 HTLGPAMNAHLQLNDWTSALRLWDELVETG 125
                 688889*******************99876 PP

  == domain 5    score: 15.7 bits;  conditional E-value: 1e-05
   PF13812.1   3 tyntlitalaksgrpeaAlalleeMe 28 
                 +y++ i+a++ sg++ +Alal++e +
  MMETSP1325-20131115|7072_1 133 CYAAAIWAYVGSGNWRRALALFDECK 158
                 69*********************987 PP

  == domain 6    score: -0.6 bits;  conditional E-value: 1.7
   PF13812.1  20 AlalleeMeqqg 31 
                  l ll+eM +q+
  MMETSP1325-20131115|7072_1 188 LLVLLDEMDRQN 199
                 578999**9886 PP

  == domain 7    score: 9.9 bits;  conditional E-value: 0.00077
   PF13812.1   2 etyntlitalaksgrpeaAlallee 26 
                 + +++ ++a++k+g+ ++A +l++e
  MMETSP1325-20131115|7072_1 206 VVFSSAVRACSKAGQAASAIELVAE 230
                 679999***************9987 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.044        50      14      31 .]       5      22 ..       3      22 .. 0.87
   2 ?    2.1   0.0      0.18     2e+02      14      24 ..      41      51 ..      39      52 .. 0.90
   3 !   20.6   0.0   2.3e-07   0.00026       2      28 ..      61      87 ..      60      89 .. 0.94
   4 !    7.0   0.0    0.0049       5.6       7      29 ..     102     124 ..     100     126 .. 0.91
   5 !   12.2   0.0   0.00011      0.13       5      28 ..     136     159 ..     133     160 .. 0.87
   6 ?   -2.2   0.0       4.1   4.7e+03      21      28 ..     190     197 ..     179     199 .. 0.82
   7 !    9.9   0.0    0.0006      0.68       1      31 []     206     236 ..     206     236 .. 0.92

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.044
  PF01535.15 14 GkleeAlelfkeMkekGv 31
                G+   Al l++ M++ Gv
  MMETSP1325-20131115|7072_1  5 GQGARALALLRSMERAGV 22
                66678**********997 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.18
  PF01535.15 14 GkleeAlelfk 24
                G++e Alel++
  MMETSP1325-20131115|7072_1 41 GQWERALELLD 51
                9********97 PP

  == domain 3    score: 20.6 bits;  conditional E-value: 2.3e-07
  PF01535.15  2 tynslIsgyckaGkleeAlelfkeMke 28
                ++n+ Is+++k G++++Al++++ M++
  MMETSP1325-20131115|7072_1 61 AFNVAISACVKGGQPRKALQILDLMRQ 87
                69***********************96 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.0049
  PF01535.15   7 IsgyckaGkleeAlelfkeMkek 29 
                 ++++ + +++  Al+l++e++e 
  MMETSP1325-20131115|7072_1 102 MNAHLQLNDWTSALRLWDELVET 124
                 7999***************9985 PP

  == domain 5    score: 12.2 bits;  conditional E-value: 0.00011
  PF01535.15   5 slIsgyckaGkleeAlelfkeMke 28 
                 + I +y+ +G+++ Al lf+e k+
  MMETSP1325-20131115|7072_1 136 AAIWAYVGSGNWRRALALFDECKS 159
                 6699*****************886 PP

  == domain 6    score: -2.2 bits;  conditional E-value: 4.1
  PF01535.15  21 elfkeMke 28 
                  l++eM +
  MMETSP1325-20131115|7072_1 190 VLLDEMDR 197
                 58999976 PP

  == domain 7    score: 9.9 bits;  conditional E-value: 0.0006
  PF01535.15   1 vtynslIsgyckaGkleeAlelfkeMkekGv 31 
                 v+++s +++++kaG+   A+el  e  ++G+
  MMETSP1325-20131115|7072_1 206 VVFSSAVRACSKAGQAASAIELVAEASRCGI 236
                 68999*****************999888886 PP

>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.6e-06    0.0018      19      43 ..       7      31 ..       3      37 .. 0.87
   2 ?   -2.4   0.0       3.9   4.4e+03      17      27 ..      41      51 ..      39      52 .. 0.86
   3 !   17.4   0.0   2.5e-06    0.0028       1      40 [.      57      97 ..      57      99 .. 0.89
   4 !    6.3   0.0    0.0073       8.3      10      37 ..     102     130 ..     101     134 .. 0.87
   5 !    6.9   0.0    0.0048       5.4       5      30 ..     133     158 ..     129     163 .. 0.89
   6 !    9.9   0.0   0.00057      0.65       2      42 ..     204     244 ..     203     248 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 1.6e-06
   PF13041.1 19 veeAfklfneMkkrgikPnvyTYsi 43
                   A+ l++ M++ g++Pn++TY +
  MMETSP1325-20131115|7072_1  7 GARALALLRSMERAGVEPNAVTYCS 31
                5679*******************75 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 3.9
   PF13041.1 17 gkveeAfklfn 27
                g++e A++l++
  MMETSP1325-20131115|7072_1 41 GQWERALELLD 51
                89******986 PP

  == domain 3    score: 17.4 bits;  conditional E-value: 2.5e-06
   PF13041.1  1 pnvvtYNtlIsglckkgkveeAfklfneMkk.rgikPnvyT 40
                p v ++N+ Is+++k g+ ++A+++++ M++ r+ + +++T
  MMETSP1325-20131115|7072_1 57 PSVRAFNVAISACVKGGQPRKALQILDLMRQgRQFELDAHT 97
                67889************************953888888888 PP

  == domain 4    score: 6.3 bits;  conditional E-value: 0.0073
   PF13041.1  10 IsglckkgkveeAfklfneMkkrgi.kPn 37 
                 ++++++ +++ +A++l++e  + g   Pn
  MMETSP1325-20131115|7072_1 102 MNAHLQLNDWTSALRLWDELVETGSlAPN 130
                 899*****************998842565 PP

  == domain 5    score: 6.9 bits;  conditional E-value: 0.0048
   PF13041.1   5 tYNtlIsglckkgkveeAfklfneMk 30 
                 +Y + I +++  g+++ A+ lf+e k
  MMETSP1325-20131115|7072_1 133 CYAAAIWAYVGSGNWRRALALFDECK 158
                 6889999****************976 PP

  == domain 6    score: 9.9 bits;  conditional E-value: 0.00057
   PF13041.1   2 nvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYs 42 
                 ++v++ + ++++ k+g+  +A++l  e  + gi+  v  Y 
  MMETSP1325-20131115|7072_1 204 DTVVFSSAVRACSKAGQAASAIELVAEASRCGIELQVSAYR 244
                 799******************************98887775 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       1.1   1.3e+03      25      34 .]       9      18 ..       8      18 .. 0.89
   2 !    7.0   0.2    0.0032       3.7       2      11 ..      21      30 ..      20      52 .. 0.83
   3 !    9.3   0.0    0.0006      0.68       2      34 .]      54      86 ..      53      86 .. 0.96
   4 ?    0.5   0.0      0.34   3.9e+02      21      32 ..     145     156 ..     143     156 .. 0.90
   5 ?   -2.7   0.1       3.5     4e+03      29      33 ..     191     195 ..     190     196 .. 0.87
   6 ?    3.1   0.0      0.05        57       6      32 ..     204     230 ..     203     232 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.1
   PF12854.2 25 eAvelldeMe 34
                +A+ ll+ Me
  MMETSP1325-20131115|7072_1  9 RALALLRSME 18
                79*******7 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0032
   PF12854.2  2 GlkPdvvTYN 11
                G++P++vTY 
  MMETSP1325-20131115|7072_1 21 GVEPNAVTYC 30
                9********6 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.0006
   PF12854.2  2 GlkPdvvTYNtLIdGlCraGrvdeAvelldeMe 34
                G++P v  +N  I++  + G   +A+++ld M+
  MMETSP1325-20131115|7072_1 54 GIEPSVRAFNVAISACVKGGQPRKALQILDLMR 86
                9*****************************996 PP

  == domain 4    score: 0.5 bits;  conditional E-value: 0.34
   PF12854.2  21 GrvdeAvellde 32 
                 G+  +A+ l+de
  MMETSP1325-20131115|7072_1 145 GNWRRALALFDE 156
                 88899******8 PP

  == domain 5    score: -2.7 bits;  conditional E-value: 3.5
   PF12854.2  29 lldeM 33 
                 lldeM
  MMETSP1325-20131115|7072_1 191 LLDEM 195
                 89*** PP

  == domain 6    score: 3.1 bits;  conditional E-value: 0.05
   PF12854.2   6 dvvTYNtLIdGlCraGrvdeAvellde 32 
                 d+v +++ + +  +aG    A+el+ e
  MMETSP1325-20131115|7072_1 204 DTVVFSSAVRACSKAGQAASAIELVAE 230
                 8999999999999***********976 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.61   6.9e+02      15      25 ..      41      51 ..      40      53 .. 0.73
   2 ?    5.4   0.0     0.016        18       9      29 ..     103     123 ..     103     124 .. 0.91
   3 ?    5.1   0.0     0.019        22       9      27 ..     139     157 ..     139     159 .. 0.89
   4 ?   -1.8   0.1       3.3   3.7e+03      10      27 ..     214     231 ..     213     233 .. 0.74
   5 ?   -0.2   0.0      0.98   1.1e+03      23      32 ..     242     251 ..     240     253 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.61
                T-HHHHHHHHH CS
  PF07719.12 15 gdyeeAleafe 25
                g++e+Ale+++
  MMETSP1325-20131115|7072_1 41 GQWERALELLD 51
                77888888765 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.016
                 HHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   9 layyklgdyeeAleafekAle 29 
                 +a+++l+d+  Al+++++ +e
  MMETSP1325-20131115|7072_1 103 NAHLQLNDWTSALRLWDELVE 123
                 699*************99876 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.019
                 HHHHHTT-HHHHHHHHHHH CS
  PF07719.12   9 layyklgdyeeAleafekA 27 
                 +ay  +g++ +Al++f+++
  MMETSP1325-20131115|7072_1 139 WAYVGSGNWRRALALFDEC 157
                 589999**********986 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 3.3
                 HHHHTT-HHHHHHHHHHH CS
  PF07719.12  10 ayyklgdyeeAleafekA 27 
                 a+ k+g+ + A+e+  +A
  MMETSP1325-20131115|7072_1 214 ACSKAGQAASAIELVAEA 231
                 566888888898877666 PP

  == domain 5    score: -0.2 bits;  conditional E-value: 0.98
                 HHHHHHHH-T CS
  PF07719.12  23 afekAleldP 32 
                 a++ Al++ P
  MMETSP1325-20131115|7072_1 242 AYRAALAILP 251
                 8******998 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0068       7.7      35      62 ..      24      51 ..       7      54 .. 0.80
   2 ?   -2.8   0.0       4.1   4.6e+03      14      25 ..      70      81 ..      62      84 .. 0.62
   3 !    9.7   0.0   0.00051      0.58      11      64 ..     103     157 ..      94     160 .. 0.80
   4 ?    0.3   0.2      0.44     5e+02      19      50 ..     221     252 ..     211     269 .. 0.50

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0068
   PF13414.1 35 nnaelyynlAlaylklgkdyeeAledye 62
                 na+ y+  A a+ + g ++e+Ale ++
  MMETSP1325-20131115|7072_1 24 PNAVTYCSAATALGNDGGQWERALELLD 51
                3899************9999***99876 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 4.1
   PF13414.1 14 fkegdydeAiea 25
                 k g++ +A++ 
  MMETSP1325-20131115|7072_1 70 VKGGQPRKALQI 81
                455666666654 PP

  == domain 3    score: 9.7 bits;  conditional E-value: 0.00051
   PF13414.1  11 nalfkegdydeAieayekAleldpnnae..lyynlAlaylklgkdyeeAledyekA 64 
                 na+++++d+  A++++++ +e  +  ++  +y++   ay   g ++++Al+ ++++
  MMETSP1325-20131115|7072_1 103 NAHLQLNDWTSALRLWDELVETGSLAPNgpCYAAAIWAYVGSG-NWRRALALFDEC 157
                 899*****************97666555227777777777778.5799*9999876 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.44
   PF13414.1  19 ydeAieayekAleldpnnaelyynlAlaylkl 50 
                  + Aie+  +A +   +  +  y+ Ala l  
  MMETSP1325-20131115|7072_1 221 AASAIELVAEASRCGIELQVSAYRAALAILPS 252
                 55555555555544444444444444554444 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.92     1e+03      15      30 ..       5      20 ..       2      33 .. 0.74
   2 ?    3.3   0.1      0.13   1.5e+02      13      26 ..      39      52 ..      26      55 .. 0.78
   3 ?    1.8   0.0      0.39   4.5e+02       9      26 ..      67      84 ..      59      99 .. 0.78
   4 ?    5.3   0.0      0.03        34       9      30 ..     103     124 ..      98     130 .. 0.88
   5 !    8.7   0.1    0.0024       2.7       4      27 ..     134     157 ..     132     179 .. 0.75
   6 ?    3.4   0.2      0.12   1.4e+02       7      28 ..     211     232 ..     207     250 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.92
   PF13428.1 15 GdpdeAiallrralal 30
                G+ ++A+allr + ++
  MMETSP1325-20131115|7072_1  5 GQGARALALLRSMERA 20
                6778899999887665 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.13
   PF13428.1 13 alGdpdeAiallrr 26
                + G++++A++ll++
  MMETSP1325-20131115|7072_1 39 DGGQWERALELLDA 52
                468********986 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.39
   PF13428.1  9 rallalGdpdeAiallrr 26
                 a+   G+p +A++ l+ 
  MMETSP1325-20131115|7072_1 67 SACVKGGQPRKALQILDL 84
                677888********9975 PP

  == domain 4    score: 5.3 bits;  conditional E-value: 0.03
   PF13428.1   9 rallalGdpdeAiallrralal 30 
                 +a+l+l+d+  A++l ++++++
  MMETSP1325-20131115|7072_1 103 NAHLQLNDWTSALRLWDELVET 124
                 699***************9986 PP

  == domain 5    score: 8.7 bits;  conditional E-value: 0.0024
   PF13428.1   4 llalarallalGdpdeAiallrra 27 
                 ++a  +a+  +G++ +A+al+++ 
  MMETSP1325-20131115|7072_1 134 YAAAIWAYVGSGNWRRALALFDEC 157
                 678889****************96 PP

  == domain 6    score: 3.4 bits;  conditional E-value: 0.12
   PF13428.1   7 larallalGdpdeAiallrral 28 
                  +ra+  +G+ + Ai+l  +a 
  MMETSP1325-20131115|7072_1 211 AVRACSKAGQAASAIELVAEAS 232
                 5789999*********999983 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.13   1.5e+02      12      23 ..      40      51 ..      26      54 .. 0.83
   2 ?   -2.6   0.0       5.1   5.8e+03       8      21 ..      68      81 ..      67      83 .. 0.82
   3 ?    3.3   0.0     0.069        79       7      24 ..     103     120 ..     103     131 .. 0.83
   4 ?    5.6   0.0     0.013        14       7      23 ..     139     155 ..     133     162 .. 0.84
   5 ?   -0.8   0.0       1.4   1.6e+03       7      21 ..     213     227 ..     210     233 .. 0.85
   6 ?   -1.7   0.0       2.7     3e+03      20      31 ..     241     252 ..     240     258 .. 0.68

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.13
   PF13176.1 12 lgdyekAielye 23
                 g++e+A+el+ 
  MMETSP1325-20131115|7072_1 40 GGQWERALELLD 51
                599******986 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 5.1
   PF13176.1  8 lysrlgdyekAiel 21
                ++++ g+ +kA+++
  MMETSP1325-20131115|7072_1 68 ACVKGGQPRKALQI 81
                78899999999986 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.069
   PF13176.1   7 rlysrlgdyekAielyer 24 
                 +++ +l+d+  A++l  +
  MMETSP1325-20131115|7072_1 103 NAHLQLNDWTSALRLWDE 120
                 5899********998766 PP

  == domain 4    score: 5.6 bits;  conditional E-value: 0.013
   PF13176.1   7 rlysrlgdyekAielye 23 
                 ++y+ +g++++A+ l+ 
  MMETSP1325-20131115|7072_1 139 WAYVGSGNWRRALALFD 155
                 68999********9986 PP

  == domain 5    score: -0.8 bits;  conditional E-value: 1.4
   PF13176.1   7 rlysrlgdyekAiel 21 
                 r++s+ g+   Aiel
  MMETSP1325-20131115|7072_1 213 RACSKAGQAASAIEL 227
                 789999999999998 PP

  == domain 6    score: -1.7 bits;  conditional E-value: 2.7
   PF13176.1  20 elyeraLaltkd 31 
                 ++y++aLa+  +
  MMETSP1325-20131115|7072_1 241 SAYRAALAILPS 252
                 789997776544 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       6.6   7.6e+03      18      24 ..       9      15 ..       4      30 .. 0.59
   2 ?    3.9   0.0      0.07        80       7      24 ..      33      51 ..      31      52 .. 0.82
   3 ?    2.4   0.0      0.21   2.4e+02      11      24 ..      70      83 ..      61      87 .. 0.78
   4 ?    3.7   0.0     0.081        92       9      28 ..     104     123 ..     101     124 .. 0.86
   5 ?    3.9   0.0     0.069        78       8      26 ..     139     157 ..     134     160 .. 0.77

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 6.6
                HHHHHHH CS
   PF13174.1 18 eAleale 24
                +Al++l+
  MMETSP1325-20131115|7072_1  9 RALALLR 15
                5555444 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.07
                HHHHHH.HHHHHHHHHHHH CS
   PF13174.1  7 alsyyk.lgdtdeAleale 24
                a ++ + +g++++Ale+l+
  MMETSP1325-20131115|7072_1 33 ATALGNdGGQWERALELLD 51
                667777789*******986 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.21
                HHHHHHHHHHHHHH CS
   PF13174.1 11 yklgdtdeAleale 24
                 k+g++++Al++l+
  MMETSP1325-20131115|7072_1 70 VKGGQPRKALQILD 83
                4799*******986 PP

  == domain 4    score: 3.7 bits;  conditional E-value: 0.081
                 HHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   9 syyklgdtdeAlealerlik 28 
                 ++++l+d++ Al+++++l++
  MMETSP1325-20131115|7072_1 104 AHLQLNDWTSALRLWDELVE 123
                 778889***********997 PP

  == domain 5    score: 3.9 bits;  conditional E-value: 0.069
                 HHHHHHHHHHHHHHHHHHH CS
   PF13174.1   8 lsyyklgdtdeAlealerl 26 
                 ++y   g++++Al++++++
  MMETSP1325-20131115|7072_1 139 WAYVGSGNWRRALALFDEC 157
                 6777657*********975 PP

>> PF13429.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   0.00053       0.6     131     224 ..      80     172 ..      57     174 .. 0.77
   2 ?    3.9   0.1     0.018        21     111     172 ..     170     231 ..     165     242 .. 0.91

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00053
   PF13429.1 131 ellasleekeaaeqsalfllaraellrqegqkkkAlrllrrala...lkpassdlraallWlliDlgrraelrealaawkaeaesdsaLwgpfaaay 224
                 ++l  + + +++e +a +l    ++++q +++  Alrl ++ ++   l+p +    aa +W+++ +g  +  r+ala +++ ++  + ++gp a ay
  MMETSP1325-20131115|7072_1  80 QILDLMRQGRQFELDAHTLGPAMNAHLQLNDWTSALRLWDELVEtgsLAP-NGPCYAAAIWAYVGSG--N-WRRALALFDECKSDPAVMQGPSAQAY 172
                 5555566778899999999999******************9996222667.47899999*****766..4.4679*999988877778888888887 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.018
   PF13429.1 111 rlLqsalellerakdykrieellasleekeaaeqsalfllaraellrqegqkkkAlrllrra 172
                 +++  a+   e   +++ +  ll ++ ++++   +  +++   ++ +++gq + A++l+ +a
  MMETSP1325-20131115|7072_1 170 QAYRGAIVACEHGSQWQYLLVLLDEMDRQNRSWLDTVVFSSAVRACSKAGQAASAIELVAEA 231
                 67788999999999***********99999999*************************9988 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.51   5.8e+02     100     132 ..      63      95 ..       8     104 .. 0.63
   2 ?   10.4   0.0   0.00048      0.55      69     124 ..     102     159 ..      92     162 .. 0.88
   3 ?   -0.3   0.2      0.94   1.1e+03       5      32 ..     207     231 ..     203     267 .. 0.69

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.51
  PF03704.12 100 rqlmrAlyrsGrqaeALevYrrlrrrLaeeLGv 132
                    + A ++ G+  +AL+  + +r+  + eL+ 
  MMETSP1325-20131115|7072_1  63 NVAISACVKGGQPRKALQILDLMRQGRQFELDA 95 
                 445667777788888888888888777777776 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00048
  PF03704.12  69 ieadlrlgrheellaelealvalhPl..rErlhrqlmrAlyrsGrqaeALevYrrlrr 124
                 + a+l+l+++ ++l+ + +lv+   l  +   +++ + A++ sG+   AL+ ++++++
  MMETSP1325-20131115|7072_1 102 MNAHLQLNDWTSALRLWDELVETGSLapNGPCYAAAIWAYVGSGNWRRALALFDECKS 159
                 6799*****************99887446789**********************9985 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 0.94
  PF03704.12   5 rferlvaagrralaagdpeeaarlleaa 32 
                 +f ++    r+ ++ag+ ++a++l+++a
  MMETSP1325-20131115|7072_1 207 VFSSA---VRACSKAGQAASAIELVAEA 231
                 55555...44445556666666666555 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.3       0.1   1.2e+02      14      62 ..       8      57 ..       3      60 .. 0.63
   2 ?    3.4   0.1       0.1   1.1e+02      11      54 ..      41      82 ..      30      95 .. 0.65
   3 ?    4.7   0.0     0.039        45      39      62 ..     103     129 ..      70     132 .. 0.67
   4 ?   11.4   0.0   0.00032      0.36       5      62 ..     103     161 ..     101     168 .. 0.91
   5 ?    7.6   0.1    0.0047       5.4       4      46 ..     138     184 ..     135     186 .. 0.77
   6 ?   -0.3   0.1       1.4   1.7e+03      39      57 ..     213     231 ..     209     235 .. 0.81
   7 ?   -0.9   0.2       2.3   2.7e+03      38      53 ..     246     261 ..     241     274 .. 0.49

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.1
   PF13432.1 14 deAlaaleaalala..PeaaeallllaeallrlgrldeAaallraalalaP 62
                ++Ala+l+   ++   P a+ +  +   +  + g++++A++ll+a  ++ P
  MMETSP1325-20131115|7072_1  8 ARALALLRSMERAGvePNAVTYCSAATALGNDGGQWERALELLDAS-GIEP 57
                6777777777777755544444444444444559999999999887.5555 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.1
   PF13432.1 11 GdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaall 54
                G++++Al++l +a   +P  ++a+     a+ + g++ +A++ l
  MMETSP1325-20131115|7072_1 41 GQWERALELL-DASGIEP-SVRAFNVAISACVKGGQPRKALQIL 82
                4477777777.4444444.6777777777777777777777555 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.039
   PF13432.1  39 eallrlgrldeAaallraal...alaP 62 
                  a+l+l+++  A++l ++++   +laP
  MMETSP1325-20131115|7072_1 103 NAHLQLNDWTSALRLWDELVetgSLAP 129
                 677888888888877777774555555 PP

  == domain 4    score: 11.4 bits;  conditional E-value: 0.00032
   PF13432.1   5 rallraGdydeAlaaleaalala...PeaaeallllaeallrlgrldeAaallraalalaP 62 
                 +a l+++d+  Al++++++++     P +   + +  +a+   g++ +A+al+++  + +P
  MMETSP1325-20131115|7072_1 103 NAHLQLNDWTSALRLWDELVETGslaP-NGPCYAAAIWAYVGSGNWRRALALFDEC-KSDP 161
                 68999******************8888.9**********************99997.6555 PP

  == domain 5    score: 7.6 bits;  conditional E-value: 0.0047
   PF13432.1   4 ArallraGdydeAlaaleaalala.....Peaaeallllaeallrlgr 46 
                   a++ +G++++Ala++++   ++     P  a+a+ +  +a+ + ++
  MMETSP1325-20131115|7072_1 138 IWAYVGSGNWRRALALFDECKSDPavmqgP-SAQAYRGAIVACEHGSQ 184
                 568999***********9988888777767.78888777777777665 PP

  == domain 6    score: -0.3 bits;  conditional E-value: 1.4
   PF13432.1  39 eallrlgrldeAaallraa 57 
                 +a+ ++g+ + A++l ++a
  MMETSP1325-20131115|7072_1 213 RACSKAGQAASAIELVAEA 231
                 6788899999999888876 PP

  == domain 7    score: -0.9 bits;  conditional E-value: 2.3
   PF13432.1  38 aeallrlgrldeAaal 53 
                 a a l  +++++A+a 
  MMETSP1325-20131115|7072_1 246 ALAILPSKEVEKARAI 261
                 4444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.53
# Mc/sec: 1288.61
//
Query:       MMETSP1325-20131115|7075_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-12   44.4   0.0    7.8e-12   44.4   0.0    1.0  1  PF03071.10 GNT-I family


Domain annotation for each model (and alignments):
>> PF03071.10  GNT-I family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.0   5.7e-16   7.8e-12     346     415 ..       3      74 .]       1      74 [] 0.83

  Alignments for each domain:
  == domain 1    score: 44.4 bits;  conditional E-value: 5.7e-16
  PF03071.10 346 kklslevkeakelqiddvvlkalkekg..evriqykgrvdfeaiadklgiledfkaGvPrtaykGivtfrik 415
                   l++e+++a+ ++ ++++  +    g  +vr++y ++ +fe+++++lgi++++ka vPrtay+G+vt++i+
  MMETSP1325-20131115|7075_1   3 PALKAELESAPLVHASQARNGNGLPVGatSVRVEYLNNREFESVSRHLGIMDNIKANVPRTAYHGVVTVNIR 74 
                 566777788888888888776655333359**************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 377.30
//
Query:       MMETSP1325-20131115|7076_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-14   52.2   0.0    5.5e-14   51.8   0.0    1.2  1  PF02548.10 Ketopantoate hydroxymethyltransferase


Domain annotation for each model (and alignments):
>> PF02548.10  Ketopantoate hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.0     4e-18   5.5e-14     209     261 .]       2      59 ..       1      59 [. 0.93

  Alignments for each domain:
  == domain 1    score: 51.8 bits;  conditional E-value: 4e-18
  PF02548.10 209 cdGqvlvleDllGl.....eeekkpkfvkkyadlaeeieealkaYaeevksgkFPaee 261
                 ++Gqvlv++D+lG+     +e+++p+f+k+yad+ + i+++l+aY+++v++g+FP+ee
  MMETSP1325-20131115|7076_1   2 THGQVLVYHDMLGMmshphHEQFVPRFCKNYADVGTAIRKGLDAYKADVEAGTFPTEE 59 
                 89***********867776799*********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 1138.27
//
Query:       MMETSP1325-20131115|7078_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.8    8.8  17.9        1.1    8.4  12.4    1.1  1  PF04652.11 Vta1 like
        2.9    5.9  12.0        3.1    5.8   8.3    1.1  1  PF09726.4  Transmembrane protein
        9.4    4.7  13.1         13    4.2   9.1    1.2  1  PF10265.4  Uncharacterized conserved protein (DUF2217)


Domain annotation for each model (and alignments):
>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  12.4   0.00023       1.1     173     321 ..      58     185 ..      23     210 .. 0.48

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00023
                 .......................XXXXXXXXXXXXXXX..X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXX.....................................................XXXXXXX CS
  PF04652.11 173 eaqesldssslpgeassasaspksaeesseslpsdpls..a.edsdssapgldadeasaspseapssspgvpsfp..spdeseasnkdsqlPsaPty.aqknssssqsvfPpsseeeetssssppsteapssppvqapsapakpslssakPtaqs 321
                 +a+++ d+s +p+  +sa+++p++a+ +  + p++pl+  + + ++ss++ + ++ +s+s+++apss p+++++p  s   s as+++s+++sa +  ++++++s+ s   +   ++                           +   a Pt+++
  MMETSP1325-20131115|7078_1  58 PASPERDESDSPSPIASARKRPRTAFTERATPPRPPLAprTaTATASSSTRASSTSSSSSSTSAPSSLPSQSTTPstSLLASAASSSSSSSSSATSCtSNAATDSEGSSISSDELGS---------------------------DDGRASPTPTR 185
                 344444455555554444444444444444444444431134444555555555555666666666666666665542222222222222222222222333333333333333333...........................33333333333 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   8.3   0.00068       3.1     318     390 ..     102     166 ..      32     220 .. 0.60

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.00068
   PF09726.4 318 aeelalkkdsnsssaeeksakskssksaktskrsksnsspkshksaagsvssssvkkneskdkkasksssgal 390
                 + +        ss++++ + +s+ss+sa +s  s+s + + s+  +a+s+ssss+++  s   +a++ s+g+ 
  MMETSP1325-20131115|7078_1 102 TAS--------SSTRASSTSSSSSSTSAPSSLPSQSTTPSTSLLASAASSSSSSSSSATSCTSNAATDSEGSS 166
                 222........22222222333333333344444444444444333333333333333222222222222222 PP

>> PF10265.4  Uncharacterized conserved protein (DUF2217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   9.1    0.0029        13      57     124 ..      96     163 ..      70     176 .. 0.57

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0029
   PF10265.4  57 sakkdkvssrrvrssssksndtlsvvsskasskssssssSlasvsarnSvsssaaansgsweaagaee 124
                 ++ +  ++s+ +r ss++s+    ++ s+ +s+s+ +s Sl +  a +S+sss+ a+s + +aa ++e
  MMETSP1325-20131115|7078_1  96 PRTATATASSSTRASSTSSSSSSTSAPSSLPSQSTTPSTSLLASAASSSSSSSSSATSCTSNAATDSE 163
                 23333344445566666666666889999999999999999888777777777666543333333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       693  (0.0506875); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.42s 00:00:01.25 Elapsed: 00:00:00.54
# Mc/sec: 1233.68
//
Query:       MMETSP1325-20131115|7081_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-27   92.7   0.0    1.3e-26   92.1   0.0    1.3  1  PF00383.17 Cytidine and deoxycytidylate deaminase zinc-binding region


Domain annotation for each model (and alignments):
>> PF00383.17  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.1   0.0   9.2e-31   1.3e-26       3     101 ..      81     194 ..      79     195 .. 0.96

  Alignments for each domain:
  == domain 1    score: 92.1 bits;  conditional E-value: 9.2e-31
                 HHHHHHHHHHHHHTT-BTTTSB----EEEETTSSBEE----BCCSSCC...................CTB-HHHHHHHHHHHH-CCCETTEEEEEEE---CCHHHHHHHHS-TEEEEE CS
  PF00383.17   3 edeklleialeaakeaykcsnfkvGavivkkngeiistgyngepaggs...................ktiHAEvnAilsaaknggsklegatlyvtlePCgmCakaiiesgikkvvig 101
                 +d++++++a + a ++ k+++++vGa+iv+ +++i++ gyng pag                     +++HAE+nAil+  +    +++g+ +yv l+PC++Cak+ii+sgi++v+++
  MMETSP1325-20131115|7081_1  81 WDDYFMSVAFLSAMRS-KDPSTQVGACIVNPENRIVGIGYNGFPAGCGddvlpwdrtaenpldtkymYVVHAEMNAILNKNSA---TVKGCRMYVALFPCNECAKLIIQSGINEVIYL 194
                 899*************.*****************************999******************************9855...899**************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 1092.19
//
Query:       MMETSP1325-20131115|7082_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-40  136.8   0.0    7.4e-40  136.6   0.0    1.0  1  PF00476.15 DNA polymerase family A


Domain annotation for each model (and alignments):
>> PF00476.15  DNA polymerase family A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.6   0.0   5.4e-44   7.4e-40     214     383 .]       2     179 ..       1     179 [. 0.95

  Alignments for each domain:
  == domain 1    score: 136.6 bits;  conditional E-value: 5.4e-44
                 HHHH-------THHHHHHHHTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH---EEECCBSEEEEGGGG-SSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCT-SEEEEEEESSEEEEEEETTTHHHHHHHHHHHHHHSS-T........SS--EEEEE---BCCCH CS
  PF00476.15 214 KtfnfGliYGagakglsqlLgiskeeakelaekyfartpgvkklrekirkeakkkGyvstlfgkrrelPdldsrnrslresaeraalNtpiQssaaDilklalikleelleekglkarlllqvHDEivlevrkeeaeavakqikelmeramel........dvlllveleqgrnwfsa 383
                 Kt+nf + YG   +gl+++ g+++eea+el ++ +a  p vk++ +++ +eak+ G + tl+g+ r+lP+++sr+r ++    raa+NtpiQ+ aaD++ +a++k+++     +l  +lllq+HDE++le ++e +e++ ++++  me+            +v l+v+ ++ r+w++a
  MMETSP1325-20131115|7082_1   2 KTLNFSIAYGKTPHGLAKDWGVTREEAQELLDAWYADRPEVKQWQQRVIEEAKRTGNTRTLMGRYRKLPEINSRDRGKQGHSARAAINTPIQGGAADVVMVAMVKINQSPLLAKLGFKLLLQIHDEVILEGPEEHVEEALAEVRRCMEHPWSDdgvglgqlRVSLDVDAKYARTWYEA 179
                 9***********************************************************************************************************999999*********************************98655555666666**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.31s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1114.83
//
Query:       MMETSP1325-20131115|7085_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-11   43.1   7.7    3.1e-11   42.8   5.3    1.0  1  PF01040.13 UbiA prenyltransferase family


Domain annotation for each model (and alignments):
>> PF01040.13  UbiA prenyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   5.3   2.2e-15   3.1e-11     124     254 ..       4     148 ..       2     151 .. 0.66

  Alignments for each domain:
  == domain 1    score: 42.8 bits;  conditional E-value: 2.2e-15
  PF01040.13 124 vvglafgllillgaaavggdi.......plpllllalllfllalallltndirDvegDraaGirtlpvrlgrkatlyalllaaalla........tallllllaplllllavalaalallrallllrrrdpesgaksflflallfl 254
                 +++ + g+l+ +g +++++         ++++ +la ++ ++a++++ t d++D+egD++  + tl  rlg k    ++++a++l+         ++ +++++ + ++ + +ala l+l+  ++ + + +  s ++ +++++ lf+
  MMETSP1325-20131115|7085_1   4 TIACVRGFLLNFGVYYAAREAlgltfawNPSVTFLAGFMTVFAAVIAVTKDLPDIEGDKKFAVETLSTRLGVKPIA-TAATAVLLMNyagavataLLSAPGTYNAPFMAVGHALAGLWLALGFRKFEPDSMASIKRYYKRIWDLFY 148
                 688899*99999****7777678888889999999999899999999999********************777777.333333333344545534344555555555555555555555554444444444444444455555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 817.89
//
Query:       MMETSP1325-20131115|7087_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   11.4   0.6       0.25   11.1   0.4    1.2  1  PF06072.6 Alphaherpesvirus tegument protein US9


Domain annotation for each model (and alignments):
>> PF06072.6  Alphaherpesvirus tegument protein US9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.4   1.8e-05      0.25      37      57 ..      26      46 ..      24      49 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.8e-05
   PF06072.6 37 aivfvvvvlcvlsgllGalla 57
                ++v v++vlc++  llGa+++
  MMETSP1325-20131115|7087_1 26 IAVSVFLVLCSFDNLLGAIVM 46
                578999*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 254.93
//
Query:       MMETSP1325-20131115|7086_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 555.95
//
Query:       MMETSP1325-20131115|7088_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 243.99
//
Query:       MMETSP1325-20131115|7089_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-28   98.0   0.0    4.5e-28   97.5   0.0    1.2  1  PF00754.20 F5/8 type C domain


Domain annotation for each model (and alignments):
>> PF00754.20  F5/8 type C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.5   0.0   3.3e-32   4.5e-28      19     129 .]       5     126 ..       2     126 .. 0.93

  Alignments for each domain:
  == domain 1    score: 97.5 bits;  conditional E-value: 3.3e-32
                 GGTTTT...TTSSEECSSSSSTEEEEEEEEEEEEEEEEEEEE-BSTST.....SEEEEEEEEEESSSSSEEEEEEC.....BEB-SSSSSSEEEEEEEEEEEEEEEEEEEEECCESS-EEEEEE CS
  PF00754.20  19 aaldgn...kstaWsskwgdapqwlqvdLgkekkitgvvtqgrqdggn.....gyvksykiqysddgenWtevkde.....fegntdnstpvkntfdppikaryvrivptswksngniasraEl 129
                 a+l+++    +++W+++ +d++qwlqvdL++ + i gv+tqgr + g+     ++v+sy++ +s+dge Wt+v ++     f gntdn+t+v+++++ p++ar++r+ p +w  +g ia+r El
  MMETSP1325-20131115|7089_1   5 ARLNSKaaqGGGGWTAAQNDENQWLQVDLKSRRSIVGVATQGRASEGGaqgqvMFVTSYTMAFSMDGEMWTTVTQHgadliFSGNTDNTTAVTHLLPRPVSARFIRVCPRTW--QGAIALRLEL 126
                 555555555559*******************************9999999***********************************************************999..******9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       409  (0.0299152); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 905.29
//
Query:       MMETSP1325-20131115|7091_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-18   66.9   0.0    2.1e-18   66.2   0.0    1.4  1  PF03572.13 Peptidase family S41


Domain annotation for each model (and alignments):
>> PF03572.13  Peptidase family S41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.0   1.5e-22   2.1e-18       3     169 .]       6     169 ..       4     169 .. 0.78

  Alignments for each domain:
  == domain 1    score: 66.2 bits;  conditional E-value: 1.5e-22
                 --EE-S--.....-----HHHHHHHHHTT----EEE-TT-----THHHHHHHHC-B----EEE-----B-SS...........TT-B----EEE--TT------HHHHHHHH-----EE---------.-----B-----EE----EEE--TT----TT-.........----SS-- CS
  PF03572.13   3 GylripsfseekstaeelaealkklkkknvkglIlDlRnNpGGsldaavelaslflddgtivstrdrigkrdkkesdkkaskeevrtkkplvvLvnegsaSaseifagalkdngratlvGertfGkgs.vqsvvelndgsalkltiakyltpdgrsiekk.........gvePdiev 169
                 Gy++ip++++  ++   +++ ++    +  + lI+D+R+N+GG++++++       +  ++ +++++  + +       +   +  + + +++Lv+e++aS +e fa a+k +g ++++G++t+G+ + v++  ++ dg+++ ++ +++ +++  ++ ++         gv Pd+ev
  MMETSP1325-20131115|7091_1   6 GYIHIPDMER--NGFAFVNRSFAVE--ATRETLIIDVRGNGGGNISELLLPKLQTRRLAVMAPRHGQGMRYP-------EV--APPNPGLVCLLVDENTASDAECFAHAFKLLGLGLVIGTTTHGSLLsVSTDERMVDGTGIGIPSEAMESSEAVCLRGHvpfgaiencGVVPDVEV 169
                 9*******33..4444444444444..699*****************9988888777788877777777777.......22..355999************************************9761555566699999998888887777766666666666677788888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1024.83
//
Query:       MMETSP1325-20131115|7097_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 506.92
//
Query:       MMETSP1325-20131115|7100_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.5    6.2   6.2        4.3    5.9   4.3    1.1  1  PF04684.8 BAF1 / ABF1 chromatin reorganising factor


Domain annotation for each model (and alignments):
>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.3   0.00032       4.3     119     156 ..      21      61 ..       2      70 .. 0.37

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00032
   PF04684.8 119 tnghglaeddvaed...eaqdddedddaavtaaiaaavaav 156
                   g+g ++ +  ++   + +ddd d  +a +aa aaa aa 
  MMETSP1325-20131115|7100_1  21 GVGEGESDCECDDNrdgDGDDDDMDGATAGAAAGAAAAAAA 61 
                 33333333222222000212222222222233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       466  (0.0340843); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 588.67
//
Query:       MMETSP1325-20131115|7090_1  [L=974]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.4e-106  347.0  72.9    3.8e-12   45.8   1.2   13.3 13  PF00839.12 Cysteine rich repeat


Domain annotation for each model (and alignments):
>> PF00839.12  Cysteine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.1     1e-08   0.00014      22      56 ..      33      67 ..      18      69 .. 0.87
   2 !   32.0   0.6   5.5e-12   7.6e-08       1      54 [.      72     132 ..      72     136 .. 0.91
   3 !   36.7   0.0   1.8e-13   2.5e-09       2      57 ..     139     194 ..     138     195 .. 0.96
   4 !   33.4   0.5   2.1e-12   2.9e-08       2      57 ..     197     252 ..     196     253 .. 0.91
   5 !   25.5   0.5   6.2e-10   8.4e-06       3      56 ..     258     319 ..     256     321 .. 0.90
   6 !   43.0   0.1   2.1e-15   2.9e-11       3      56 ..     325     378 ..     323     380 .. 0.96
   7 !   28.7   2.3     6e-11   8.2e-07      12      57 ..     390     437 ..     383     438 .. 0.87
   8 !   45.8   1.2   2.8e-16   3.8e-12       3      57 ..     443     504 ..     441     505 .. 0.94
   9 !   32.2   0.1   4.8e-12   6.6e-08       1      56 [.     507     562 ..     507     564 .. 0.96
  10 !   26.2   0.8   3.6e-10   4.9e-06       2      56 ..     566     619 ..     565     621 .. 0.93
  11 !   19.5   0.1   4.4e-08    0.0006       3      53 ..     626     686 ..     624     691 .. 0.92
  12 !   26.4   0.0   3.1e-10   4.2e-06       3      56 ..     695     748 ..     694     750 .. 0.96
  13 !   19.5   1.3   4.4e-08   0.00061       1      56 [.     751     807 ..     751     809 .. 0.92

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1e-08
  PF00839.12 22 pkLqkaCkediekfCseieegegqvleCLkehled 56
                 + +++C+ +iekfCs+++ ge+++ +CL++++++
  MMETSP1325-20131115|7090_1 33 VAAKSKCEGEIEKFCSNTKFGEARIQKCLYDNMRK 67
                56789***************************986 PP

  == domain 2    score: 32.0 bits;  conditional E-value: 5.5e-12
  PF00839.12   1 eeCkqaltrlqeevaeDykldpkLqkaCkediekfCsei.......eegegqvleCLkehl 54 
                 ++Ck+++++  ++ a+Dy+ld k +++C +di  +C+e+         ++g v++C k++l
  MMETSP1325-20131115|7090_1  72 DDCKAEIQEKITNAAQDYRLDWKVKTKCIKDIVALCPEEkkvadssFFESGVVISCMKKQL 132
                 69**********************************88778888878899*******9987 PP

  == domain 3    score: 36.7 bits;  conditional E-value: 1.8e-13
  PF00839.12   2 eCkqaltrlqeevaeDykldpkLqkaCkediekfCseieegegqvleCLkehlede 57 
                  Ck++++r+   +ae++ +++  +++C+ di++fC+++++g+g++  CL+ hl ++
  MMETSP1325-20131115|7090_1 139 TCKNEIVRVAGVQAEHISANKPAMDKCATDIANFCPNVPKGQGKIQGCLRSHLSQL 194
                 5***************************************************9875 PP

  == domain 4    score: 33.4 bits;  conditional E-value: 2.1e-12
  PF00839.12   2 eCkqaltrlqeevaeDykldpkLqkaCkediekfCseieegegqvleCLkehlede 57 
                  C+++ +  ++ +++D+ + pk  + Ck  i+kfC++ ++g++++ +CL eh++d 
  MMETSP1325-20131115|7090_1 197 PCRAQEFSDMKVESADIMMKPKMARTCKPAIKKFCPDLTHGDARIFDCLSEHKDDD 252
                 688666666899999**************************************985 PP

  == domain 5    score: 25.5 bits;  conditional E-value: 6.2e-10
  PF00839.12   3 CkqaltrlqeevaeDykldpkLqkaCkediekfCsei........eegegqvleCLkehled 56 
                 C +++++ +e  a+D++l  + +  C+ di+ +C+ +        e  eg vl+CL +++++
  MMETSP1325-20131115|7090_1 258 CAEEIQADEELTAKDWRLKFGVSHQCEADIDDLCATEkaskgesgEGMEGVVLQCLVDARKK 319
                 999*******************************66556778888999*********99886 PP

  == domain 6    score: 43.0 bits;  conditional E-value: 2.1e-15
  PF00839.12   3 CkqaltrlqeevaeDykldpkLqkaCkediekfCseieegegqvleCLkehled 56 
                 Ck ++ +l++ +a++yk +p+L  aC+ d+ ++Cs++e g+g+v eCL ++++ 
  MMETSP1325-20131115|7090_1 325 CKVEINKLMKSQASNYKNNPQLVAACATDVGTHCSDVEPGHGRVHECLSKKIKS 378
                 *************************************************99886 PP

  == domain 7    score: 28.7 bits;  conditional E-value: 6e-11
  PF00839.12  12 eevaeDyk..ldpkLqkaCkediekfCseieegegqvleCLkehlede 57 
                 ++va+  k  l+p L+++Ck  ++k+C ++++++g+++ CL++h++de
  MMETSP1325-20131115|7090_1 390 QMVASSEKvvLNPMLKSVCKTTLKKKCEDVKDEDGALMRCLEDHADDE 437
                 55666666669**********************************997 PP

  == domain 8    score: 45.8 bits;  conditional E-value: 2.8e-16
  PF00839.12   3 CkqaltrlqeevaeDykldpkLqkaCkediekfCsei.......eegegqvleCLkehlede 57 
                 C+ a+ r+++  ++D++l+p L+k C+ di++fC+e+        e  g+v++CL+++++d+
  MMETSP1325-20131115|7090_1 443 CHDAVGRVTKTKNQDFRLNPLLSKTCEADINTFCAEEkqsmqqgDEMGGKVMQCLIDNRKDL 504
                 **********************************8877889999999************997 PP

  == domain 9    score: 32.2 bits;  conditional E-value: 4.8e-12
  PF00839.12   1 eeCkqaltrlqeevaeDykldpkLqkaCkediekfCseieegegqvleCLkehled 56 
                 + Ck  + r q + ++++k dp+ + +C +di++fC+ +eegeg++ +CL +++++
  MMETSP1325-20131115|7090_1 507 PACKSSIMRKQIQRTSNVKNDPVQMGVCTQDINTFCDGVEEGEGRIHKCLFDNMKN 562
                 57***************************************************998 PP

  == domain 10    score: 26.2 bits;  conditional E-value: 3.6e-10
  PF00839.12   2 eCkqaltrlqeevaeDykldpkLqkaCkediekfCseieegegqvleCLkehled 56 
                  C++  ++ q++++e +kl+p   k Ck  ++k+C++       +++CL eh+++
  MMETSP1325-20131115|7090_1 566 ACREKEFKTQTMMTESVKLNPSMNKQCKPLVAKYCAD-VPAGRPLMKCLNEHKDK 619
                 699888999****************************.999999********987 PP

  == domain 11    score: 19.5 bits;  conditional E-value: 4.4e-08
  PF00839.12   3 CkqaltrlqeevaeDykldpkLqkaCkediek.....fCsei.....eegegqvleCLkeh 53 
                 C++ l++ q ++++++k+ p+ + aC++d+++     +C+++     ++  g+ l+CL ++
  MMETSP1325-20131115|7090_1 626 CRTILQNEQIKESKNIKFKPGTSLACASDLSRlkasgKCPKAtiaisTSLGGENLQCLVDN 686
                 ******************************8888899**99778999***********998 PP

  == domain 12    score: 26.4 bits;  conditional E-value: 3.1e-10
  PF00839.12   3 CkqaltrlqeevaeDykldpkLqkaCkediekfCseieegegqvleCLkehled 56 
                 Ck+ +++  +  +eD+++ p+   aC+ di+ fCs++  g g+   CL++++++
  MMETSP1325-20131115|7090_1 695 CKAKIREQNKATSEDIRAKPGGAGACAADIDIFCSDVSPGGGRRNRCLQDNINN 748
                 9*****************************99*******************998 PP

  == domain 13    score: 19.5 bits;  conditional E-value: 4.4e-08
  PF00839.12   1 eeCkqaltrlqeevaeDykldpkLqkaCkediekfCsei.eegegqvleCLkehled 56 
                 +eCk+   +++  +a+D  ++p   k+C ++ + fCse+  + + q+++CLk + ++
  MMETSP1325-20131115|7090_1 751 PECKKIQENIMAREAKDATISPFVGKSCFNEQKMFCSEEtDKAHMQIMACLKSNQQK 807
                 79******************************77****7688899*******99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (974 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       559  (0.0408865); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.36u 0.38s 00:00:01.74 Elapsed: 00:00:00.71
# Mc/sec: 3287.40
//
Query:       MMETSP1325-20131115|7099_1  [L=372]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-19   69.9   0.0    2.2e-19   69.3   0.0    1.3  1  PF00072.19 Response regulator receiver domain
    9.9e-18   63.7   0.1    1.4e-17   63.2   0.1    1.3  1  PF02518.21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
  ------ inclusion threshold ------
        3.9    5.5   6.7        5.7    4.9   4.6    1.1  1  PF04415.7  Protein of unknown function (DUF515)


Domain annotation for each model (and alignments):
>> PF00072.19  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.0   4.9e-23   2.2e-19       1     111 [.     246     360 ..     246     361 .. 0.96

  Alignments for each domain:
  == domain 1    score: 69.3 bits;  conditional E-value: 4.9e-23
                 EEEESSSHHHHHHHHHHHHHTTSEEEEEESSSHHHHHHHHHHHESEEEEESS-TT----HHHHHHHHHT.....TTSEEEEEES-TTHHHHHHHHHTT-SEEEESS--HHHHHHHH CS
  PF00072.19   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireee.....pklpiivvtahgeeedalealkaGakdflsKpfdpeelvkav 111
                 +l+vdD +++r+l+r  l + g+ +++ea+dge+a e++++k++ lil+D  mp+m+G+e++k+ir  +       ++i  +t+++ +ed+ e  + G +++l+Kp +  +l +++
  MMETSP1325-20131115|7099_1 246 ILVVDDVNSNRKLIRMNLGRMGF-KCDEAEDGEKATEMARAKHYALILMDNVMPKMTGVEATKQIRLYDraagrLGTKIFGLTGNALSEDVNEFKQSGCDEVLTKPLSTPKLKEHL 360
                 89*********************.*****************************************99887777788********************************99999876 PP

>> PF02518.21  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.2   0.1   3.1e-21   1.4e-17      36     110 ..      77     152 ..       4     153 .. 0.91

  Alignments for each domain:
  == domain 1    score: 63.2 bits;  conditional E-value: 3.1e-21
                 TCEEEEEEE-----THHHHHHHCSTTTCCSC.SSGGGTT----THHHHHHCCEEEEEEEEECTCT-CEEEEEEEEC CS
  PF02518.21  36 gelvieVeDnGiGipeedlervfepffqtdd.dsrkvggtGlGlsivkklvellggeieveskeggGttvtlrlpl 110
                   ++++V+D+G Gi +ed+ ++f++f q+++ d ++  g+GlGl i+k ++ l+gg+i v+s  g+G+t+++ +pl
  MMETSP1325-20131115|7099_1  77 ATVQFSVTDSGVGIAREDQGKLFQAFSQVRPgDLQMGRGSGLGLCICKHVIHLHGGKIDVNSTLGEGSTFYFNVPL 152
                 5789*********************************************************************997 PP

>> PF04415.7  Protein of unknown function (DUF515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   4.6    0.0012       5.7     288     391 ..     185     291 ..     171     298 .. 0.50

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0012
   PF04415.7 288 svsessstssseslstkdspgdasilnsqrltlnsstsqsesesasssysYsv.nleeiLkA..iaagklde..deikaqlqnYGirlldlEkntnlleldEntnylvI 391
                 ++s+ssst  + slst+ s +    + s++++ +s +   +  +a++s+s  +     ++k    + + ++   + i+ +l+  G +  + E+  + +e+    +y +I
  MMETSP1325-20131115|7099_1 185 QASSSSSTVPLRSLSTSSSSSAIPSSSSSSSSASSAA--FGATEAAASLSSPLsSSSTVIKDsiLVVDDVNSnrKLIRMNLGRMGFKCDEAEDGEKATEMARAKHYALI 291
                 3444444444555544444433222222222222222..1222222222222222233333211256777665456888888888888888888887777776666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.66
# Mc/sec: 1350.67
//
Query:       MMETSP1325-20131115|7103_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.3   5.6      0.044   13.6   1.1    1.9  2  PF03653.8 Uncharacterised protein family (UPF0093)
        1.6    8.5   5.4        1.6    8.6   0.6    2.2  2  PF11872.3 Protein of unknown function (DUF3392)


Domain annotation for each model (and alignments):
>> PF03653.8  Uncharacterised protein family (UPF0093)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.3     0.067   4.6e+02      49      89 ..      34      74 ..       9      87 .. 0.66
   2 ?   13.6   1.1   6.4e-06     0.044      49     108 ..      91     148 ..      74     156 .. 0.63

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.067
   PF03653.8 49 lmerrLlriimtpamiltlvlGllllvltpgllalsegwlh 89
                +  + L  + m+ + ++++ lG +l + ++gl+al e+wl 
  MMETSP1325-20131115|7103_1 34 VCLSTLDGAAMMGSSMAVITLGGWLPWGATGLYALFETWLM 74
                44455555555555566666666776666777777777765 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 6.4e-06
   PF03653.8  49 lmerrLlriimtpamiltlvlGllllvltpgllalsegwlhvKlllvlllliyhlvlakl 108
                 +m +  +  i t a   ++++++  l+++  ++a+++ wlh+ l+++++ ++y +++a+ 
  MMETSP1325-20131115|7103_1  91 VMRKLFFPTICTTARSGVVATAV--LWTACRYVAYQKDWLHAALIFIFMAIGYTMYAAQS 148
                 33333334444444444444443..3333477999******************9998876 PP

>> PF11872.3  Protein of unknown function (DUF3392)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.2     0.022   1.5e+02      61      91 ..      43      76 ..      18      88 .. 0.77
   2 ?    8.6   0.6   0.00024       1.6      50     101 ..      90     141 ..      80     147 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.022
   PF11872.3 61 nafGyGllivklsPll...akalaklpsvllalv 91
                +++G  +++++l  +l   a++l++l +++l++v
  MMETSP1325-20131115|7103_1 43 AMMGSSMAVITLGGWLpwgATGLYALFETWLMAV 76
                6789999999987666333778999999998876 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00024
   PF11872.3  50 fllrvlvfilvnafGyGllivklsPllakalaklpsvllalvvllvfiliGv 101
                 +++r l+f  +++     ++ ++  + a   ++ ++ +l ++++++f++iG+
  MMETSP1325-20131115|7103_1  90 VVMRKLFFPTICTTARSGVVATAVLWTACRYVAYQKDWLHAALIFIFMAIGY 141
                 6889999999999999889999999999999999*****************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 753.76
//
Query:       MMETSP1325-20131115|7106_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.69
# Mc/sec: 416.76
//
Query:       MMETSP1325-20131115|7107_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.44s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 265.78
//
Query:       MMETSP1325-20131115|7108_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-61  207.0   0.0    4.8e-61  206.9   0.0    1.0  1  PF05185.11 PRMT5 arginine-N-methyltransferase
    0.00015   21.2   0.0    0.00016   21.1   0.0    1.1  1  PF13847.1  Methyltransferase domain
     0.0082   16.0   0.0      0.013   15.4   0.0    1.4  1  PF13659.1  Methyltransferase domain
  ------ inclusion threshold ------
      0.031   13.3   0.0      0.041   12.9   0.0    1.1  1  PF03848.9  Tellurite resistance protein TehB


Domain annotation for each model (and alignments):
>> PF05185.11  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.9   0.0   1.4e-64   4.8e-61     186     334 ..      12     170 .]       3     170 .] 0.95

  Alignments for each domain:
  == domain 1    score: 206.9 bits;  conditional E-value: 1.4e-64
  PF05185.11 186 kelvilvvGaGRGpLvdralkaaeetkt.........kvkvyavEKNpnAvvtLqkrvneekWeekvtiiksDmrelkapekvdilvsELLGSfgdNeLsPEcLdgvqrflkkdgisiPqsytsyvePisapklyakvksekk..ekaletpyvvklkkv 334
                  e v++vvGaGRGpLv+++l aa e            +v vyavEKNpnAvvtL++ v++e W ++vti++sDmr ++apek+di+vsELLGSfgdNeLsPEcLdg+q +lk+ g+siP sytsy++P++apkl+++v+++k    ka+et+yvvkl++v
  MMETSP1325-20131115|7108_1  12 VEAVLMVVGAGRGPLVRASLLAADEVAArlakvgvplRVTVYAVEKNPNAVVTLRNLVEMEGW-TNVTIVSSDMRVWDAPEKADIMVSELLGSFGDNELSPECLDGAQMYLKEGGVSIPVSYTSYLAPLAAPKLWNEVRNNKFegLKAFETAYVVKLHNV 170
                 5789******************9999844889999999*************************.99************************************************************************988778899**********985 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   4.8e-08   0.00016      28     109 ..      49     130 ..      19     165 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 4.8e-08
   PF13847.1  28 gakvvGiDiseeaielAkeraqklgfenveFiqgdieeleklleesfDlvisnevl...naladpqkvlkeiervlkpggrlive 109
                 + +v+ ++ +++a+   +++++  g +nv++  +d+  ++   +e+ D+++s e+l    +    +++l  ++ +lk+gg+ i +
  MMETSP1325-20131115|7108_1  49 RVTVYAVEKNPNAVVTLRNLVEMEGWTNVTIVSSDMRVWD--APEKADIMVS-ELLgsfGDNELSPECLDGAQMYLKEGGVSIPV 130
                 566***********************************99..56********.677566555566799************97754 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.7e-06     0.013       6      77 ..      18      99 ..      13     131 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.7e-06
   PF13659.1  6 dpgcGsGtfllaalel..............laalllgvEldpraaalaarnlaraglaervrvrqgdlrdlaellragsfdlvvtn 77
                 +g+G+G +  a l +              l+  +++vE +p+a+   +  ++  g++ +v+++ +d+r  +    ++++d++v+ 
  MMETSP1325-20131115|7108_1 18 VVGAGRGPLVRASLLAadevaarlakvgvpLRVTVYAVEKNPNAVVTLRNLVEMEGWT-NVTIVSSDMRVWD---APEKADIMVSE 99
                577788877766666667788888888766599************************6.*********9998...57999998875 PP

>> PF03848.9  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.2e-05     0.041      54     134 ..      51     132 ..      46     154 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.2e-05
                 -EEEEES-HHHHHHHHHHHHHTT-T.EEEEE--GGG------BSEEEEES-GGGS-GGG----HHHHHHTB-----EEEEEE CS
   PF03848.9  54 dvtavdkneasiailqeiaekenld.lkaalydinaasldeeydfilstvvlmflqaeripeiianmqektkvGGynlivaa 134
                  v av+kn +++ +l++++e e  + +++ + d+      e+ d ++s ++  f ++e  pe ++  q   k GG  + v+ 
  MMETSP1325-20131115|7108_1  51 TVYAVEKNPNAVVTLRNLVEMEGWTnVTIVSSDMRVWDAPEKADIMVSELLGSFGDNELSPECLDGAQMYLKEGGVSIPVSY 132
                 589*******************99879999*********************************************9998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 831.39
//
Query:       MMETSP1325-20131115|7112_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|7110_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 382.50
//
Query:       MMETSP1325-20131115|7109_1  [L=423]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-68  228.3   0.1    8.8e-68  227.8   0.1    1.2  1  PF01434.13 Peptidase family M41
    9.5e-28   96.9   0.0    2.1e-27   95.8   0.0    1.6  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
  ------ inclusion threshold ------
      0.096   11.9   0.0       0.15   11.3   0.0    1.2  1  PF13398.1  Peptidase M50B-like


Domain annotation for each model (and alignments):
>> PF01434.13  Peptidase family M41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.8   0.1   1.9e-71   8.8e-68       3     211 ..     171     370 ..     169     372 .. 0.96

  Alignments for each domain:
  == domain 1    score: 227.8 bits;  conditional E-value: 1.9e-71
                 HHHHHCCHHHH------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01434.13   3 keleeaidrvlaGlekksrvisekekklvAyHEaGHalvglllkeadpveKvtiiPRgq.alGltlflpeedkllltkeqllariavllgGraaEelifgedevttGasnDlekvtklarqmvtefGmseklGpvaleeeeeeevflgrelkkekelseetaeeideevkelveeayerakeilkenreelealaeaLlekEtldaeeie 211
                  ++e a drv+ Gle  +++is +ekk+vA+HEaGHa++g++l++adp+ Kvti+PRg+ alG++++lp e   l t++q+ ++i+++l+GraaEe+ fg  +vttGas+Dl++vt +++qm++++G++ ++G++a+ ++e+       ++ +++++s++ta+++dee k++v++ayer+ ++++e++ e+ a+ae+LlekEt+++++i 
  MMETSP1325-20131115|7109_1 171 MDFEAAADRVIGGLES-NKIISPEEKKTVAFHEAGHAVAGWFLEHADPILKVTIVPRGSgALGYAQYLPAEV-ALRTEAQINDMICMALAGRAAEEVNFG--KVTTGASDDLRRVTGIIYQMIQQYGFNPRIGQLAFPQSEG------GGFPEQRPYSDATAQAMDEEAKKMVDAAYERTLDLMREKQSEVTAIAEMLLEKETINHDDIV 370
                 589************9.8****************************************************99.589************************..************************************9887......3577899***************************************************9985 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.8   0.0   4.6e-31   2.1e-27      30     131 ..       2     106 ..       1     107 [. 0.96

  Alignments for each domain:
  == domain 1    score: 95.8 bits;  conditional E-value: 4.6e-31
                 ECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH....SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24  30 sgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr....sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 sgs++++++vg +++++r+lfkea+++a p+i+fiDEida++++r     ++ ++e+e+++nqLl e+dg++++++ v+v++ tnr d ld+allr gRfdr+i++e
  MMETSP1325-20131115|7109_1   2 SGSDFIEMFVGVGPSRVRDLFKEARANA-PCIVFIDEIDAVGRQRgkggFSGGNDERENTLNQLLVEMDGFSSSTN-VVVLAGTNRADILDQALLRpGRFDRQIQVE 106
                 799************************9.*****************99878899*******************855.***************************987 PP

>> PF13398.1  Peptidase M50B-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.2e-05      0.15      21      54 ..     194     229 ..     181     240 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 3.2e-05
   PF13398.1  21 kllvvlvHElGHalaallt..GgrvkgielhsdesG 54 
                 +  +v +HE+GHa+a + +     + ++++++++sG
  MMETSP1325-20131115|7109_1 194 EKKTVAFHEAGHAVAGWFLehADPILKVTIVPRGSG 229
                 55689***********98622334666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       641  (0.0468841); expected 273.4 (0.02)
Passed bias filter:                      482  (0.0352545); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.36s 00:00:01.18 Elapsed: 00:00:00.56
# Mc/sec: 1810.11
//
Query:       MMETSP1325-20131115|7113_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.058   13.0   1.0      0.071   12.8   0.1    1.6  2  PF09889.4  Uncharacterized protein containing a Zn-ribbon (DUF2116)
      0.087   11.5   0.3      0.092   11.4   0.2    1.0  1  PF09480.5  Type III secretion system protein PrgH-EprH (PrgH)
       0.16   11.1   0.5       0.16   11.1   0.4    1.0  1  PF01852.14 START domain
       0.43   10.3   2.5       0.21   11.3   0.3    1.4  2  PF05620.6  Protein of unknown function (DUF788)
       0.71   10.6   4.1       0.61   10.8   2.3    1.3  1  PF12609.3  Wound-induced protein


Domain annotation for each model (and alignments):
>> PF09889.4  Uncharacterized protein containing a Zn-ribbon (DUF2116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.62   1.7e+03      30      39 ..       6      15 ..       1      17 [. 0.56
   2 ?   12.8   0.1   2.6e-05     0.071      21      56 ..      23      58 ..      13      61 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.62
   PF09889.4 30 kkrkkvaksq 39
                ++ +k++k q
  MMETSP1325-20131115|7113_1  6 RASRKMIKAQ 15
                3446666665 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 2.6e-05
   PF09889.4 21 sekCqeeyekkrkkvaksqqilfgililllavvlvl 56
                +e+ + + +k+rkk+ak  + l +++++ +avv+ l
  MMETSP1325-20131115|7113_1 23 EEETKTASKKQRKKAAKLGKTLRMVMFAAMAVVAGL 58
                56677788999*******999999999999999866 PP

>> PF09480.5  Type III secretion system protein PrgH-EprH (PrgH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   3.3e-05     0.092     101     146 ..      16      59 ..       5      69 .. 0.52

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.3e-05
   PF09480.5 101 ranepWqeeepaaeegaaaktkqrkan...sllaalvalfalaaiivlq 146
                  ++e W+eee     ++ a++kqrk+    ++ + +v+++a+a+++ l 
  MMETSP1325-20131115|7113_1  16 AKKEGWSEEE-----TKTASKKQRKKAaklGKTLRMVMFAAMAVVAGLR 59 
                 5677788877.....3334444444440003444444444444444443 PP

>> PF01852.14  START domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.4   5.9e-05      0.16       3      59 ..       3      55 ..       1      62 [. 0.84

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5.9e-05
                ---HHHHHH----SS----EEEEE-----EEEEE--S...----EEEEEEEESS-HH CS
  PF01852.14  3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvla 59
                +++ a  ++ ka+a+++gW+++ ++  +++ ++k ++     g++lr++ +  m+++
  MMETSP1325-20131115|7113_1  3 KNKRASRKMIKAQAKKEGWSEEETKTASKKQRKKAAK----LGKTLRMVMFAAMAVV 55
                56667788999************99999999999966....8999999988777765 PP

>> PF05620.6  Protein of unknown function (DUF788)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.8    0.0015       4.2     141     167 ..      12      39 ..       2      42 .. 0.52
   2 ?   11.3   0.3   7.6e-05      0.21       3      38 ..      27      62 ..      25      68 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0015
   PF05620.6 141 nasaseeqeaetee.eekskrqeklekr 167
                  +++ ++++ ++ee +++sk+q+k+ ++
  MMETSP1325-20131115|7113_1  12 IKAQAKKEGWSEEEtKTASKKQRKKAAK 39 
                 3333333333333347888888887776 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 7.6e-05
   PF05620.6  3 nksaKkraaknkkilkqlllillainllyllvrllf 38
                + ++Kk+++k +k+ k+l++++ a+++++  +r +f
  MMETSP1325-20131115|7113_1 27 KTASKKQRKKAAKLGKTLRMVMFAAMAVVAGLRWYF 62
                5799*****************999998888775444 PP

>> PF12609.3  Wound-induced protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.3   0.00022      0.61      31      73 ..       5      49 ..       2      52 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00022
   PF12609.3 31 akanaarsasqakklsssssss..saaaaeekrkqaEesLRtVMy 73
                ++a+ + +++qakk   s++ +  +++++++k+ +  + LR+VM+
  MMETSP1325-20131115|7113_1  5 KRASRKMIKAQAKKEGWSEEETktASKKQRKKAAKLGKTLRMVMF 49
                344444455566665555554456999999999999********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1391  (0.101741); expected 273.4 (0.02)
Passed bias filter:                     1052  (0.0769456); expected 273.4 (0.02)
Passed Vit filter:                       101  (0.00738736); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 304.99
//
Query:       MMETSP1325-20131115|7114_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       651  (0.0476156); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.41s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 928.59
//
Query:       MMETSP1325-20131115|7115_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-16   58.0   0.3    2.8e-14   52.3   0.0    2.0  2  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    8.5e-13   47.8   0.0    7.4e-10   38.4   0.0    2.0  2  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
      3e-09   36.6   0.2    1.3e-07   31.3   0.0    2.0  2  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.13   12.1   0.0    1.2  1  PF08675.6  RNA binding domain


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.2   0.00062       2.1      40      50 ..       3      13 ..       1      15 [. 0.85
   2 !   52.3   0.0   8.3e-18   2.8e-14      13      70 .]      10      63 .]      10      63 .] 0.96

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00062
                -EEEEEESSHH CS
  PF00076.17 40 gfafVeFesee 50
                gfaf+eFe+  
  MMETSP1325-20131115|7115_1  3 GFAFIEFEDLQ 13
                9*******976 PP

  == domain 2    score: 52.3 bits;  conditional E-value: 8.3e-18
                HHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBEE CS
  PF00076.17 13 eeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklggrelk 70
                e+L + F+kfGpi+si + r    ++ gfaf+eFe+++d e+A++++ng+ ++g+ ++
  MMETSP1325-20131115|7115_1 10 EDLQDKFEKFGPIVSIWVAR----QPPGFAFIEFEDRRDGEDAMREMNGRAIQGCDIR 63
                79******************....6*****************************9886 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00041       1.4      22      33 ..       3      14 ..       1      14 [. 0.90
   2 !   38.4   0.0   2.2e-13   7.4e-10       4      51 ..      15      62 ..      12      63 .] 0.93

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00041
   PF13893.1 22 gqAfvefdtvea 33
                g+Af+ef+++++
  MMETSP1325-20131115|7115_1  3 GFAFIEFEDLQD 14
                8********997 PP

  == domain 2    score: 38.4 bits;  conditional E-value: 2.2e-13
   PF13893.1  4 lfskfGkverikifrkkggqAfvefdtveaArkakeylngvklygktL 51
                 f+kfG++++i + r+ +g+Af+ef+++++ + a++ +ng+ ++g+ +
  MMETSP1325-20131115|7115_1 15 KFEKFGPIVSIWVARQPPGFAFIEFEDRRDGEDAMREMNGRAIQGCDI 62
                59*****************************************99866 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1   0.00086       2.9      39      51 ..       2      14 ..       1      15 [. 0.86
   2 !   31.3   0.0   3.8e-11   1.3e-07      13      69 .]      10      63 .]      10      63 .] 0.94

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00086
   PF14259.1 39 rgfAfvefeseed 51
                +gfAf+efe+ +d
  MMETSP1325-20131115|7115_1  2 PGFAFIEFEDLQD 14
                69*******9875 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 3.8e-11
   PF14259.1 13 edlreffspygkvegvriprnkdgrgrgfAfvefeseedAqkalkkln.lvlkgrtir 69
                edl + f+++g++ ++ + r     ++gfAf+efe++ d + a++ +n   ++g  ir
  MMETSP1325-20131115|7115_1 10 EDLQDKFEKFGPIVSIWVARQ----PPGFAFIEFEDRRDGEDAMREMNgRAIQGCDIR 63
                79***********9****997....7********************999999998775 PP

>> PF08675.6  RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.9e-05      0.13      23      54 ..      10      44 ..       6      56 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.9e-05
   PF08675.6 23 sdlyqkfkafGnvqvswlddt...safvalsqrea 54
                 dl++kf+ fG++   w+       af+ +++r  
  MMETSP1325-20131115|7115_1 10 EDLQDKFEKFGPIVSIWVARQppgFAFIEFEDRRD 44
                69***********9999976412257777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|7116_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|7117_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 235.03
//
Query:       MMETSP1325-20131115|7118_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.062   11.7   0.0      0.065   11.7   0.0    1.0  1  PF02074.10 Carboxypeptidase Taq (M32) metallopeptidase


Domain annotation for each model (and alignments):
>> PF02074.10  Carboxypeptidase Taq (M32) metallopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.7e-06     0.065     336     360 ..      26      50 ..       2      51 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.7e-06
  PF02074.10 336 lavnavkPslirveadevtynlhil 360
                   +++v P+++r+ea ev y++ +l
  MMETSP1325-20131115|7118_1  26 ALLEEVVPDMVRTEASEVLYEFELL 50 
                 34689****************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|7119_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 448.68
//
Query:       MMETSP1325-20131115|7121_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       524  (0.0383265); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 309.53
//
Query:       MMETSP1325-20131115|7120_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0011   18.4   0.0     0.0015   18.0   0.0    1.1  1  PF10269.4 Transmembrane Fragile-X-F protein
  ------ inclusion threshold ------
      0.065   12.5   0.1       0.11   11.8   0.0    1.3  1  PF10225.4 Uncharacterized conserved protein (DUF2215)


Domain annotation for each model (and alignments):
>> PF10269.4  Transmembrane Fragile-X-F protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.1e-07    0.0015      29      93 ..      75     141 ..      71     167 .. 0.73

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2.1e-07
   PF10269.4  29 allliasgesrnefkamlialvlhllllafellvvikL.etsnalswkivfiPl..yvllvlsilalv 93 
                  l+ +++   +n+++ m++ ++++ ++++++  v+ ++ +  ++ sw + f P     llv si  + 
  MMETSP1325-20131115|7120_1  75 GLVPPLG-LDCNRTLMMMMMMMMMTIVMMVMKVVIEQIgYPTGRTSWMVLFTPTrwAWLLVRSIKDAS 141
                 5555555.78999*************************999************963244555554443 PP

>> PF10225.4  Uncharacterized conserved protein (DUF2215)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.5e-05      0.11     130     206 ..      90     167 ..      81     186 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.5e-05
   PF10225.4 130 vkwtlrlialvlilqssldpelalgalilallvksllkpisalkglkrkyr..refqk.pskrrllteeeyeeqgeeetr 206
                 ++ ++ ++ +v+++  + ++++++ +  + ++   l++p+++++ l r ++  +++ + p kr +  eee e q+++ ++
  MMETSP1325-20131115|7120_1  90 MMMMMMMMTIVMMVMKVVIEQIGYPTGRTSWM--VLFTPTRWAWLLVRSIKdaSHRSEaPVKRDEADEEEEERQTVKGKK 167
                 45567788999999999999999999988886..8999************988666667999999999999999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       992  (0.0725571); expected 273.4 (0.02)
Passed bias filter:                      574  (0.0419836); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.43s 00:00:00.97 Elapsed: 00:00:00.77
# Mc/sec: 588.20
//
Query:       MMETSP1325-20131115|7126_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0034   16.2   0.0     0.0035   16.1   0.0    1.0  1  PF10128.4 Glucose-6-phosphate dehydrogenase subunit


Domain annotation for each model (and alignments):
>> PF10128.4  Glucose-6-phosphate dehydrogenase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.6e-07    0.0035      64     121 ..       8      63 ..       1      69 [. 0.87

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.6e-07
   PF10128.4  64 vlpLllpdlPvvvWWpgslapenplldeLgaladrlItDsaaledpeaalerlaelie 121
                  ++Ll+  +  vvW+p+   + +p  d+  ++a+r I  + ++e p++ l+++a+ ++
  MMETSP1325-20131115|7126_1   8 AKNLLVGPAARVVWYPKR--EVRPRHDRARRCATRAIGSARSFERPKEHLAARARAAR 63 
                 6789999**********9..99*******************************99443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 306.90
//
Query:       MMETSP1325-20131115|7127_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00085   19.7   0.2    0.00085   19.7   0.1    2.3  2  PF13459.1 4Fe-4S single cluster domain
  ------ inclusion threshold ------
      0.021   15.1   0.1      0.021   15.1   0.1    2.6  2  PF13370.1 4Fe-4S single cluster domain


Domain annotation for each model (and alignments):
>> PF13459.1  4Fe-4S single cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   1.2e-07   0.00085      46      65 .]       8      27 ..       3      27 .. 0.85
   2 ?   -2.8   2.2       1.3     9e+03      10      15 ..      78      83 ..      70     120 .. 0.63

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.2e-07
   PF13459.1 46 dleedaqeAadaCPvdaIhv 65
                d    ++eA+d+CPvd+Ih+
  MMETSP1325-20131115|7127_1  8 DADHIIREAIDTCPVDCIHY 27
                5567799***********96 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 1.3
   PF13459.1 10 gcgaCv 15
                gc+aC 
  MMETSP1325-20131115|7127_1 78 GCAACP 83
                444453 PP

>> PF13370.1  4Fe-4S single cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1     3e-06     0.021      41      57 ..      10      26 ..       1      27 [. 0.74
   2 ?   -4.9   3.9         2   1.4e+04      51      51 ..      82      82 ..      66     118 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3e-06
   PF13370.1 41 kedaeeAlesCPvesIk 57
                 + ++eA++ CPv++I+
  MMETSP1325-20131115|7127_1 10 DHIIREAIDTCPVDCIH 26
                34689***********9 PP

  == domain 2    score: -4.9 bits;  conditional E-value: 2
   PF13370.1 51 C 51
                C
  MMETSP1325-20131115|7127_1 82 C 82
                2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       693  (0.0506875); expected 273.4 (0.02)
Passed bias filter:                      535  (0.0391311); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 613.47
//
Query:       MMETSP1325-20131115|7124_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0024   17.3   3.1     0.0024   17.3   2.2    2.2  3  PF11026.3 Protein of unknown function (DUF2721)
  ------ inclusion threshold ------
        1.8    8.5   4.3         12    5.9   0.1    2.7  3  PF09398.5 FOP N terminal dimerisation domain


Domain annotation for each model (and alignments):
>> PF11026.3  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.32   2.2e+03      54      62 ..      43      51 ..      27      80 .. 0.51
   2 !   17.3   2.2   3.5e-07    0.0024      33     122 ..      83     178 ..      62     186 .. 0.72
   3 ?   -3.1   1.3      0.71   4.8e+03      48      58 ..     212     223 ..     188     239 .. 0.52

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.32
   PF11026.3 54 nlrrRlrli 62
                + + R+rl 
  MMETSP1325-20131115|7124_1 43 QAEERARLA 51
                222222222 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 3.5e-07
   PF11026.3  33 leerlee.kedeelrke..kaelknlrrRlrlirraillatlsallivlvilllflsall.elelslavailFilallllilsl..llflrEirla 122
                 l++rl++ ke ++ ++e   ++  nlr+R r  r + +  +++ +++  ++ll   s+ + ++el + + ++F la  +l++ +  ++f+ +++l+
  MMETSP1325-20131115|7124_1  83 LQSRLRAsKEVRAAEDErlVRQKVNLRQRQRHHRIMATRWAFASVICFGAMLLNVGSVAAtNAELGYSLGAVFALAGTALAFQAfkASFVKQVFLS 178
                 33343331333333222359************************9999999998885554599999999****99999888765224566666666 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 0.71
   PF11026.3  48 e.kaelknlrrR 58 
                   +++++  ++R
  MMETSP1325-20131115|7124_1 212 LaRQKIEMREKR 223
                 224444433333 PP

>> PF09398.5  FOP N terminal dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1    0.0093        63      39      70 ..      33      63 ..      20      69 .. 0.80
   2 ?    5.9   0.1    0.0017        12      30      55 ..     165     190 ..     160     209 .. 0.82
   3 ?   -3.2   0.0       1.1   7.5e+03      47      59 ..     232     244 ..     227     244 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.0093
   PF09398.5 39 avfqpEasleeeledRealakeLnivesesak 70
                 + q+E +++++  +R  la e ++++ e+a+
  MMETSP1325-20131115|7124_1 33 KIAQSEQNFRQAE-ERARLAEEEELNKVENAA 63
                6889*****9987.9*****988887777654 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0017
   PF09398.5  30 effeldftlavfqpEasleeeledRe 55 
                 + f+ +f   vf +E +lee +e R 
  MMETSP1325-20131115|7124_1 165 QAFKASFVKQVFLSEEELEEMIERRA 190
                 6799******************8883 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 1.1
   PF09398.5  47 leeeledRealak 59 
                 lee++ +R++l k
  MMETSP1325-20131115|7124_1 232 LEEKIRKRDMLMK 244
                 6789999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1683  (0.123098); expected 273.4 (0.02)
Passed bias filter:                      543  (0.0397162); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.50
# Mc/sec: 1179.01
//
Query:       MMETSP1325-20131115|7123_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.49
# Mc/sec: 1354.68
//
Query:       MMETSP1325-20131115|7128_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|7125_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.8   0.1        0.2   11.9   0.0    1.4  1  PF10961.3 Protein of unknown function (DUF2763)


Domain annotation for each model (and alignments):
>> PF10961.3  Protein of unknown function (DUF2763)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.5e-05       0.2      28      72 ..     137     180 ..     126     185 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.5e-05
   PF10961.3  28 ilefislFFrtllspevekarrknssskkkiddgrGgpgapgGgr 72 
                 i+e+is  F+++ +p+ + ++   ++ + + d+ +G  g++g +r
  MMETSP1325-20131115|7125_1 137 IAEVISAMFKSITKPKIKPKQADAKQGEGEADGKQG-EGGGGSRR 180
                 56899**********999999877776666555333.33332333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      421  (0.0307929); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.42s 00:00:00.94 Elapsed: 00:00:00.53
# Mc/sec: 840.99
//
Query:       MMETSP1325-20131115|7130_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0047   16.9   0.5     0.0092   15.9   0.4    1.5  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.029   13.5   1.2       0.23   10.7   0.2    2.4  3  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.4   1.3e-06    0.0092       2      64 ..       4      61 ..       1      62 [. 0.89

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.3e-06
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64
                l+ +F  +D    g +  e+Ll+ll+ l+ +  ++ v +     +ke+D    ++++++Ef+ 
  MMETSP1325-20131115|7130_1  4 LRYMFAIFDLEDQGLILHEDLLELLTDLH-PDQQGPVNRA----LKEIDIVEGRKMTYDEFAD 61
                7889*********************9976.7679999999....******9666*******86 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   3.3e-05      0.23       2      28 ..       4      30 ..       3      31 .. 0.92
   2 ?   -2.8   0.0       0.7   4.8e+03       3      10 ..      40      47 ..      39      48 .. 0.73
   3 ?    1.1   0.0      0.04   2.7e+02      16      24 ..      53      61 ..      52      62 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 3.3e-05
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                l+ +F++fD    G I  e+++e+l++
  MMETSP1325-20131115|7130_1  4 LRYMFAIFDLEDQGLILHEDLLELLTD 30
                789*********************987 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.7
                HHHHHHHC CS
  PF00036.27  3 keaFkefD 10
                ++a ke+D
  MMETSP1325-20131115|7130_1 40 NRALKEID 47
                57888888 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.04
                EBEHHHHHH CS
  PF00036.27 16 kIsfeEfke 24
                k++++Ef +
  MMETSP1325-20131115|7130_1 53 KMTYDEFAD 61
                689****87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 516.14
//
Query:       MMETSP1325-20131115|7129_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-13   48.8   6.6    5.4e-13   48.3   4.5    1.3  1  PF13639.1  Ring finger domain
    1.6e-09   37.3   6.9    2.4e-09   36.7   4.8    1.2  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    3.3e-09   36.1   7.2    5.2e-09   35.5   5.0    1.3  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    3.6e-08   33.3   5.4    5.9e-08   32.6   3.7    1.3  1  PF12678.2  RING-H2 zinc finger
    2.9e-05   23.5   9.7    4.6e-05   22.8   6.7    1.2  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    0.00099   18.7   4.8     0.0019   17.9   3.3    1.5  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
     0.0017   18.2   7.7      0.003   17.4   5.3    1.5  1  PF12906.2  RING-variant domain
     0.0035   16.8   3.2     0.0088   15.5   0.8    2.3  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
  ------ inclusion threshold ------
      0.011   15.0   0.1      0.026   13.8   0.1    1.6  1  PF04423.9  Rad50 zinc hook motif
      0.019   14.0   1.8      0.025   13.6   1.2    1.1  1  PF04641.7  Replication termination factor 2
      0.053   13.2   1.9      0.092   12.4   1.3    1.4  1  PF05883.6  Baculovirus U-box/Ring-like domain
      0.059   13.2   9.6       0.63    9.9   6.7    2.3  1  PF11793.3  FANCL C-terminal domain
      0.067   13.0   7.4       0.16   11.9   5.1    1.7  1  PF08746.6  RING-like domain
       0.18   11.2   4.6       0.33   10.3   3.2    1.5  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
        0.6    9.7   3.4       0.85    9.2   2.4    1.1  1  PF05290.6  Baculovirus immediate-early protein (IE-0)
          1    9.0  10.0       0.53    9.9   5.2    1.8  2  PF00628.24 PHD-finger
        1.8    8.0   7.0        6.9    6.1   4.9    2.0  1  PF14447.1  Prokaryotic RING finger family 4


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   4.5   6.8e-16   5.4e-13       2      46 .]      54     101 ..      53     101 .. 0.89

  Alignments for each domain:
  == domain 1    score: 48.3 bits;  conditional E-value: 6.8e-16
   PF13639.1   2 eCaiCldelse.geevvrlpCgHvfHeeCldewlrs..snsCPlCrkp 46 
                 +C+iCl+ +   +++ +++ CgHvfH+ Cl++wl++  ++ CPlC++p
  MMETSP1325-20131115|7129_1  54 SCCICLEAVAPkDRKRMETDCGHVFHSACLKKWLSKaeNPGCPLCKAP 101
                 7********88788888*****************875468*****986 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   4.8     3e-12   2.4e-09       3      45 ..      53      99 ..      52     100 .. 0.88

  Alignments for each domain:
  == domain 1    score: 36.7 bits;  conditional E-value: 3e-12
   PF13923.1  3 fsCpiCleelen....pviltpCgHlyCkkCieqwleks.kkkCPiCr 45
                +sC iCle +        + t CgH++++ C+++wl+k+ ++ CP+C+
  MMETSP1325-20131115|7129_1 53 ESCCICLEAVAPkdrkR-METDCGHVFHSACLKKWLSKAeNPGCPLCK 99
                79******996666845.67******************99999****8 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   5.0   6.4e-12   5.2e-09       1      41 []      55      98 ..      55      98 .. 0.96

  Alignments for each domain:
  == domain 1    score: 35.5 bits;  conditional E-value: 6.4e-12
                -TTTSSS-SSEE....BSCTS-EE-CHHHHHHHCST-----TTT CS
  PF00097.20  1 CpiCleeakepn...elleCkHsfCskCirkilksrkkvkCPlC 41
                C iCle ++ ++   + ++C+H f+s+C++k+l++ ++  CPlC
  MMETSP1325-20131115|7129_1 55 CCICLEAVAPKDrkrMETDCGHVFHSACLKKWLSKAENPGCPLC 98
                **********99999*******************888889**** PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   3.7   7.4e-11   5.9e-08      18      75 .]      51      99 ..      36      99 .. 0.78

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 7.4e-11
   PF12678.2 18 sednCaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrk..tCPlcr 75
                 e+ C+iC +++        ap+   + + +   CgH+FH  C++kWl +++   CPlc+
  MMETSP1325-20131115|7129_1 51 CEESCCICLEAV--------APK---DRKRMETDCGHVFHSACLKKWLSKAEnpGCPLCK 99
                356799999888........566...44445568**************7777689****6 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   6.7   5.7e-08   4.6e-05       3      48 ..      53     103 ..      51     104 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 5.7e-08
   PF13920.1   3 ktCvvCle....readvlllpCgHlclCeeCaerllk..rkkkCpiCrspie 48 
                 ++C++Cle    ++++ + + CgH+ + ++C +++l+  ++  Cp+C++p++
  MMETSP1325-20131115|7129_1  53 ESCCICLEavapKDRKRMETDCGHV-FHSACLKKWLSkaENPGCPLCKAPMD 103
                 68******554447789999*****.**********999*********9976 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   3.3   2.3e-06    0.0019      37      79 ..      60     100 ..      42     105 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 2.3e-06
   PF12861.2  37 sckfpGddcplvlGkckhnfhlhcilkwletetskglcpmcrq 79 
                 +   p d    +   c h+fh  c+ kwl++ +    cp+c+ 
  MMETSP1325-20131115|7129_1  60 EAVAPKDRKR-METDCGHVFHSACLKKWLSKAENP-GCPLCKA 100
                 4445555544.4568**************987765.5***986 PP

>> PF12906.2  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   5.3   3.8e-06     0.003       1      47 []      55      98 ..      55      98 .. 0.89

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 3.8e-06
                ETTTTEE-----..---------TTS--HHHHHHHHHHHT-SB-S-- CS
   PF12906.2  1 CriCleeeeeseplirpCkCkGslklvHesCleeWlkesaktkCelC 47
                C iCle+ + ++   ++  C     ++H++Cl++Wl++ ++  C lC
  MMETSP1325-20131115|7129_1 55 CCICLEAVAPKDRKRMETDCGH---VFHSACLKKWLSKAENPGCPLC 98
                99****9999997777777766...*************99999**** PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.8   1.1e-05    0.0088      13      47 ..      55      90 ..      52      97 .. 0.78
   2 ?    1.0   0.1      0.35   2.8e+02      13      21 ..      95     104 ..      91     109 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.1e-05
                -TTT-S.-SS....EEEES---EEEHHHHHHHHHHH CS
   PF13445.1 13 Cpiske.qsteqnpPvvLpCGhvisrealeklakgg 47
                C i+ e +  ++ + +   CGhv+   +l+k++++ 
  MMETSP1325-20131115|7129_1 55 CCICLEaVAPKDRKRMETDCGHVFHSACLKKWLSKA 90
                8999998877777766667*************9844 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.35
                 -TTT-S.-SS CS
   PF13445.1  13 Cpiske.qst 21 
                 Cp +k+ +  
  MMETSP1325-20131115|7129_1  95 CPLCKApMDR 104
                 ******9955 PP

>> PF04423.9  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   3.3e-05     0.026      17      39 ..      88     111 ..      84     113 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.3e-05
                 TT---.--S-------HHHHHHHH CS
   PF04423.9  17 keakg.cCPvCgreLdeeheqeli 39 
                 ++a++  CP+C+ ++d  ++++l+
  MMETSP1325-20131115|7129_1  88 SKAENpGCPLCKAPMDRPRRSRLS 111
                 5566669*************9997 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.2   3.2e-05     0.025     108     160 ..      47     102 ..      32     107 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.2e-05
   PF04641.7 108 dtkeapfiCpvtglelngktkfvalrkcGcVfsekalkev..k.eekv..CpvCnkef 160
                 +++e +  C +    ++ k +  +  +cG+Vf    lk+   k e  +  Cp C+++ 
  MMETSP1325-20131115|7129_1  47 EMNECEESCCICLEAVAPKDRKRMETDCGHVFHSACLKKWlsKaE--NpgCPLCKAPM 102
                 5666666799999999***********************955434..356****9886 PP

>> PF05883.6  Baculovirus U-box/Ring-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.3   0.00011     0.092      22      68 ..      48      89 ..      36      96 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00011
   PF05883.6 22 fkevsveCaiCldeieenkGvvavtekgtldleklfhkeClkrfkre 68
                ++e++  C+iCl+++  ++      ++   d  ++fh++Clk++ ++
  MMETSP1325-20131115|7129_1 48 MNECEESCCICLEAVAPKD-----RKRMETDCGHVFHSACLKKWLSK 89
                5779999********9933.....678889999***********433 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   6.7   0.00078      0.63       3      45 ..      53      91 ..      51     105 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00078
                -S-SSS--SS--------B--S-TT----B-SGGGHHHHHHHH CS
   PF11793.3  3 veCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrslk 45
                 +C iC+     +++       ++ C++ fH+aCLk Wl + +
  MMETSP1325-20131115|7129_1 53 ESCCICLEAVAPKDRK----RMETDCGHVFHSACLKKWLSKAE 91
                5788888777644333....34678**************8765 PP

>> PF08746.6  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   5.1   0.00019      0.16      16      43 .]      71      98 ..      49      98 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00019
   PF08746.6 16 nedCeiklHvdClkkyirhrskkrCpsC 43
                + dC   +H  Clkk +++ +++ Cp C
  MMETSP1325-20131115|7129_1 71 ETDCGHVFHSACLKKWLSKAENPGCPLC 98
                469***********************99 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.2   0.00041      0.33      10      56 ..      51      98 ..      46     109 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00041
                XX-B-TTT-SB-SSEEEES....----EEEHHHHHHHHTTT--B------- CS
   PF11789.3 10 islkCpltlkpfkePvtsk....kCnHvFEkeaIlkmlkrkkkvkCPvaGC 56
                 +  C++ l+    P   k     C HvF    + k l++ ++  CP+  C
  MMETSP1325-20131115|7129_1 51 CEESCCICLEA-VAPKDRKrmetDCGHVFHSACLKKWLSKAENPGCPL--C 98
                56678887665.457666667779***********************9..7 PP

>> PF05290.6  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.4    0.0011      0.85      82     131 ..      54     102 ..      48     111 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0011
   PF05290.6  82 ecnicedtsaeerflkPneccGykicnlcyanlwkfstvyPvcPvcktsf 131
                  c ic ++ a +   + ++ cG+    +c  + w      P cP+ck+ +
  MMETSP1325-20131115|7129_1  54 SCCICLEAVAPKDRKRMETDCGHVFHSACLKK-WLSKAENPGCPLCKAPM 102
                 69*********99999*************865.8878899*******865 PP

>> PF00628.24  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   1.6       3.3   2.6e+03       9      21 ..      43      56 ..      39      59 .. 0.67
   2 ?    9.9   5.2   0.00066      0.53       2      50 ..      55     100 ..      54     101 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 3.3
                CTTS-EEEBS.SSS CS
  PF00628.24  9 deegelvlCd.gCk 21
                 ++ge+  C+ +C+
  MMETSP1325-20131115|7129_1 43 SDDGEMNECEeSCC 56
                56888888873476 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00066
                 BTTTTC..TCTTS-EEEBSSSSSEEETTTSSS-SSHHSHHSTTB-SCCCHC CS
  PF00628.24   2 CkiCge..sdeegelvlCdgCkewfHlkClglkleseekpegewlCeeCke 50 
                 C+iC e  + ++ + +   +C++ fH +Cl+  l+++e+p     C+ Ck 
  MMETSP1325-20131115|7129_1  55 CCICLEavAPKDRKRME-TDCGHVFHSACLKKWLSKAENPG----CPLCKA 100
                 88999965333334433.58*******************98....*99985 PP

>> PF14447.1  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   4.9    0.0086       6.9      17      51 ..      66     104 ..      47     107 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0086
   PF14447.1  17 gtkrvllpCgHlvpdetFdle....rYsgCPfCgtrlet 51 
                 + kr    CgH+   ++   +    +  gCP+C++++++
  MMETSP1325-20131115|7129_1  66 DRKRMETDCGHVFHSACLKKWlskaENPGCPLCKAPMDR 104
                 5678888999999888866542222667********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 867.48
//
Query:       MMETSP1325-20131115|7133_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-05   24.2   0.0    3.9e-05   23.5   0.0    1.4  1  PF11938.3 TLR4 regulator and MIR-interacting MSAP


Domain annotation for each model (and alignments):
>> PF11938.3  TLR4 regulator and MIR-interacting MSAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   2.9e-09   3.9e-05      65     150 ..       1      88 [.       1      89 [. 0.84

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 2.9e-09
   PF11938.3  65 mkdyklekekstsrrvakkmsetke.tlkelvekgvkveasaeskelkkaCerllEehEdeleelfkkeqee..edlskkLCeeeskaC 150
                 m+dykl k k++   + k++++  + t ++  + g  ++ ++ s +l+++C+ llE +E ++e+++++ + e  e l+++ C e++k C
  MMETSP1325-20131115|7133_1   1 MDDYKLSKTKQGVPTYIKVNNHGGSfTVDGTMTLGGDQN-RDDSVKLHSYCDMLLEVYEGDFEAAVQSTNPEniEVLADTVCVEKEKVC 88 
                 789999999999998888887765414455556666777.999************************9998878889***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 512.90
//
Query:       MMETSP1325-20131115|7134_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-19   68.1   0.0    6.4e-19   68.0   0.0    1.0  1  PF00069.20 Protein kinase domain
    2.6e-08   33.2   0.0    2.8e-08   33.0   0.0    1.0  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.0   0.0   9.3e-23   6.4e-19     150     260 .]       4     108 .]       1     108 [] 0.84

  Alignments for each domain:
  == domain 1    score: 68.0 bits;  conditional E-value: 9.3e-23
                 EESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHH.HHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 150 ksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqle.liekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                  s+  ++t+vgt +Ym+PE +  ++ y+ ++DvWslG+++++ + g++p+s++     +  l+++ ++++++e  p + s  ++++d++ k+l kdpa R++a+e+l+hp++
  MMETSP1325-20131115|7134_1   4 DSDAAAETFVGTFTYMSPERIA-GEAYSYPADVWSLGLTVMTCALGRFPYSQA---GGYWgLLNEMKSGPVPE-LPATFS--ATFRDFVAKTLVKDPACRPSARELLSHPFV 108
                 5778899***************.****************************99...45540444445545444.444444..9***************************96 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   4.1e-12   2.8e-08     166     257 ..      13     104 ..       1     105 [. 0.89

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 4.1e-12
                 EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTS.HHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12 166 klpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypgl.sneevlellkegkrlekpekcpeelyelmkqCweeepeeRptfkelve 257
                    + +m+pE +  + ++  +DvWs G +++  + lg+ py++      +l+ +k+g   e p++ ++++ +++ + + ++p+ Rp+ +el +
  MMETSP1325-20131115|7134_1  13 VGTFTYMSPERIAGEAYSYPADVWSLGLTVMT-CALGRFPYSQAgGYWGLLNEMKSGPVPELPATFSATFRDFVAKTLVKDPACRPSARELLS 104
                 45678***********************9986.677********777889*************************************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 528.18
//
Query:       MMETSP1325-20131115|7135_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   13.7   0.6       0.04   13.5   0.4    1.1  1  PF10863.3 Protein of unknown function (DUF2702)
       0.05   13.7   0.5       0.05   13.7   0.3    1.9  2  PF09736.4 Pre-mRNA-splicing factor of RES complex


Domain annotation for each model (and alignments):
>> PF10863.3  Protein of unknown function (DUF2702)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.4   5.8e-06      0.04      86     135 ..       9      56 ..       3      64 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5.8e-06
   PF10863.3  86 gdFiksdkkvsslakkkkkteeaskrnsiyrvakddtkamiaLknKmrke 135
                  dFik d+k+ + +k+  k+   ++++ +yr +k     m  L + mr++
  MMETSP1325-20131115|7135_1   9 DDFIKEDRKIREAQKEADKELGDKQEETVYRDKKGRKLDM--LNEFMRQQ 56 
                 69***************9999999*******999877777..45666665 PP

>> PF09736.4  Pre-mRNA-splicing factor of RES complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.5     0.051   3.5e+02      15      28 ..      15      28 ..       7      36 .. 0.37
   2 ?   13.7   0.3   7.4e-06      0.05       1      31 [.      35      65 ..      35      70 .] 0.61

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.051
   PF09736.4 15 eekreekekekkee 28
                + k++e++ke+ +e
  MMETSP1325-20131115|7135_1 15 DRKIREAQKEADKE 28
                22222222222121 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 7.4e-06
   PF09736.4  1 etvyRdksGkiidkeekreekekekkeekek 31
                etvyRdk+G++ d  ++  +++  ++ +  +
  MMETSP1325-20131115|7135_1 35 ETVYRDKKGRKLDMLNEFMRQQAIREGKAVE 65
                7***********9866655555544222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       774  (0.0566121); expected 273.4 (0.02)
Passed bias filter:                      439  (0.0321094); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|7136_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 406.52
//
Query:       MMETSP1325-20131115|7132_1  [L=379]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.56    9.4  78.6         15    4.9  21.0    4.6  3  PF04886.7 PT repeat


Domain annotation for each model (and alignments):
>> PF04886.7  PT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  21.0    0.0011        15       2      34 ..      15      47 ..      11      53 .. 0.86
   2 ?  -12.4  28.1         1   1.4e+04       6      35 ..      35      64 ..      31      90 .. 0.50
   3 ?    3.6  15.2    0.0026        36       3      35 ..      77     107 ..      75     119 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0011
   PF04886.7  2 pTaqPteqPTvqPTgqPtaqPTdqPtaqPtdaP 34
                pTa Pt +PT +P+ +Pt+ PT +Pt +Pt  P
  MMETSP1325-20131115|7132_1 15 PTASPTREPTLAPAPAPTPPPTTSPTYGPTLMP 47
                899999999999999999999999999999666 PP

  == domain 2    score: -12.4 bits;  conditional E-value: 1
   PF04886.7  6 PteqPTvqPTgqPtaqPTdqPtaqPtdaPt 35
                Pt+ PT +PT  P+  PT +Pt +Pt  Pt
  MMETSP1325-20131115|7132_1 35 PTTSPTYGPTLMPVRAPTPPPTTSPTYGPT 64
                444444444444444444444444443332 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.0026
   PF04886.7   3 TaqPteqPTvqPTgqPtaqPTdqPtaqPtdaPt 35 
                 T++P+++PT +PT++  ++P ++Pt +Pt  Pt
  MMETSP1325-20131115|7132_1  77 TSAPSAEPTYAPTAA--SEPIAEPTYGPTYGPT 107
                 899**********98..6666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.33s 00:00:01.12 Elapsed: 00:00:00.49
# Mc/sec: 1853.51
//
Query:       MMETSP1325-20131115|7138_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.3   0.2       0.16   11.9   0.2    1.2  1  PF12710.2 haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   1.2e-05      0.16       1      30 [.      49      68 ..      49      85 .] 0.66

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.2e-05
                EEE------B---.........HHHHHHHH CS
   PF12710.2  1 avFDkDGTLteddtdflryllklldvlgea 30
                a+FD+D TLt  d          +++ +++
  MMETSP1325-20131115|7138_1 49 AFFDFDQTLTAVD----------TSRTNKS 68
                79***********..........4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 384.32
//
Query:       MMETSP1325-20131115|7139_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-17   61.5   5.0      1e-16   60.7   3.5    1.4  1  PF13864.1  Calmodulin-binding
  ------ inclusion threshold ------
      0.053   13.3   4.1      0.091   12.5   2.5    1.5  1  PF01086.12 Clathrin light chain
       0.39   10.5   2.4        7.6    6.4   0.1    2.7  2  PF08599.5  DNA damage repair protein Nbs1
        2.9    8.2  10.8         12    6.3   7.4    2.1  1  PF05400.8  Flagellar protein FliT


Domain annotation for each model (and alignments):
>> PF13864.1  Calmodulin-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   3.5     3e-20     1e-16       1      98 []     120     227 ..     120     227 .. 0.85

  Alignments for each domain:
  == domain 1    score: 60.7 bits;  conditional E-value: 3e-20
   PF13864.1   1 GkvPkYLkkrkeeiaeeke..eleaqeeeqe.....apkgvrllseeErlellegLkkkweelnkelqklplv...ldtlskkrrkeelEkelaeiEedikklskkkv 98 
                 G++Pk L++rk+e+a++++  e+ a e++++     ++ + + ++e Er +ll gL++k++el++e+q+ +++     t ++++ ke+lEke+ ++++ i+kl k +v
  MMETSP1325-20131115|7139_1 120 GQIPKWLTQRKAEVARQRReeEVAAAEARERaegrfQRAQPKPMPEGERTRLLGGLRAKRTELESEYQRHSHLlvaHTTTRQRALKEQLEKEMDQLDAMIAKLTKGAV 227
                 89************99966333333332222467778899*****************************99997767799***********************99776 PP

>> PF01086.12  Clathrin light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.5   2.6e-05     0.091      74     144 ..      83     152 ..      55     155 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.6e-05
  PF01086.12  74 easasegtingdeaqesddptdeyasiaqadrveeeepesireWreerdkeieerdeasekkkeeliekAk 144
                 ++ ++ g i gd a+ ++++ ++ + ++ +++ + + p  i +W  +r++e++++ +++e + +e +e A+
  MMETSP1325-20131115|7139_1  83 PKDHVRGHIEGDWAPVANQKLAHRSRVERSNKFQVK-PGQIPKWLTQRKAEVARQRREEEVAAAEARERAE 152
                 44778999**********************9*9999.*******************************996 PP

>> PF08599.5  DNA damage repair protein Nbs1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1    0.0022       7.6      37      59 ..     121     143 ..     115     148 .. 0.83
   2 ?    3.2   0.1     0.022        76      27      47 ..     193     213 ..     189     218 .. 0.90

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0022
   PF08599.5  37 eLeeWLrqevEeekqsareEsla 59 
                 ++ +WL q   e  +++reE +a
  MMETSP1325-20131115|7139_1 121 QIPKWLTQRKAEVARQRREEEVA 143
                 6679****999999999999987 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.022
   PF08599.5  27 LvaHnrkknseLeeWLrqevE 47 
                 LvaH   ++  L e L +e++
  MMETSP1325-20131115|7139_1 193 LVAHTTTRQRALKEQLEKEMD 213
                 89**************99987 PP

>> PF05400.8  Flagellar protein FliT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   7.4    0.0034        12      18      76 ..     166     224 ..     130     228 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0034
   PF05400.8  18 dereqlleklleadaelspeesekkrellrrilandaairellqprldelekelkqlrr 76 
                  er +ll  l++  +el++e++     l +   ++ +a++e+l++++d+l + + +l++
  MMETSP1325-20131115|7139_1 166 GERTRLLGGLRAKRTELESEYQRHSHLLVAHTTTRQRALKEQLEKEMDQLDAMIAKLTK 224
                 46777776666679**************************************9999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       861  (0.0629754); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.54
# Mc/sec: 1033.98
//
Query:       MMETSP1325-20131115|7140_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 350.58
//
Query:       MMETSP1325-20131115|7142_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 440.93
//
Query:       MMETSP1325-20131115|7143_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00026   21.1   0.1    0.00042   20.4   0.1    1.3  1  PF07850.9 Renin receptor-like protein
  ------ inclusion threshold ------
      0.057   12.6   0.0      0.082   12.1   0.0    1.2  1  PF11769.3 Protein of unknown function (DUF3313)


Domain annotation for each model (and alignments):
>> PF07850.9  Renin receptor-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.1   6.1e-08   0.00042      14      88 ..     113     185 ..      99     195 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 6.1e-08
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TSGGG CS
   PF07850.9  14 vksleaeltrkdreilessqisnaknpynlavkyntdYsviFniilwlvvilvlalivisvalasmDPgkDsiiY 88 
                   + +++l  + ++ l++ +    +  yn +v  + +  v +ni lw  ++lvl l+     + +mD + Ds++Y
  MMETSP1325-20131115|7143_1 113 NSAAARPLHDQFHRFLAATNSPTMTPGYNSSV--SLEQIVEYNIGLWSGIVLVLILLSAICCMINMDIQPDSLLY 185
                 44555566666666677777666666677655..4566788*********************************9 PP

>> PF11769.3  Protein of unknown function (DUF3313)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.2e-05     0.082     123     194 ..      52     123 ..      42     128 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.2e-05
   PF11769.3 123 tsevipiglvialvkaa.tgerdgsgsvavevellDaqtgellaavvdkregnklensnsvstladakaaidk 194
                 + + + + +++++   +   ++d+s ++a ++ l+Da+  e+la++  + e+        v++ a+a+++ d+
  MMETSP1325-20131115|7143_1  52 AERPDLFFMTMNGLPHVlDAHGDDSPKAAAAMSLVDAAAREVLAKISARYEDRV-AATVLVDNSAAARPLHDQ 123
                 55667777899999999999*************************987776654.666666677666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 963.43
//
Query:       MMETSP1325-20131115|7144_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 603.70
//
Query:       MMETSP1325-20131115|7145_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   13.1   2.4       0.16   12.6   1.7    1.3  1  PF09598.5 Stm1


Domain annotation for each model (and alignments):
>> PF09598.5  Stm1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.7   1.1e-05      0.16      25      66 ..      46      95 ..      37      97 .] 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.1e-05
   PF09598.5 25 lvkksttskkrdkp.kaPnkpaPreqa.....drerRgrqapsg..neaa 66
                +  +st ++ r  p  aP+ paP+++       r+rR+++++sg   +a+
  MMETSP1325-20131115|7145_1 46 VSDESTEARGRGLPpLAPTAPAPATTPpplssHRPRRRQEEASGpcSGAF 95
                56678889999999999999999976699999******999999655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 438.58
//
Query:       MMETSP1325-20131115|7146_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0074   15.9   0.7          2    8.0   0.0    2.3  2  PF02520.12 Domain of unknown function DUF148
  ------ inclusion threshold ------
      0.038   11.2   2.7        1.7    5.7   1.6    2.0  2  PF12128.3  Protein of unknown function (DUF3584)
      0.072   12.8   0.3       0.12   12.1   0.2    1.4  1  PF12731.2  Mating-type protein beta 1


Domain annotation for each model (and alignments):
>> PF02520.12  Domain of unknown function DUF148
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.4    0.0023        11      77      96 ..      16      35 ..      14      39 .. 0.89
   2 !    8.0   0.0   0.00044         2      33      77 ..      44      88 ..      35      99 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0023
  PF02520.12 77 kslTrkqkkeaiqalkkqlp 96
                +++T+++++e+++alk+ql 
  MMETSP1325-20131115|7146_1 16 QDQTIAEREEQLKALKMQLL 35
                69**************9985 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.00044
  PF02520.12 33 gvadqyeeFkkkvkakkeeleknvtavisnLssvdaklsaIldnk 77
                ++++++++  +  + +++++ +   ++ +++s++ ++ls +++  
  MMETSP1325-20131115|7146_1 44 KFSTAWAQLASAEEGAERRMLQGARTIAERFSTAPSQLSGVVSVA 88
                4899***********************************998755 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   1.6   0.00037       1.7     394     482 ..      17     105 ..       3     117 .. 0.87
   2 ?    4.0   0.0    0.0012       5.4    1070    1130 ..     134     194 ..     117     199 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.00037
   PF12128.3 394 eeeleknkerleaireekerqkaaieealealesqlrkqleaqkeelneeekelesrleelklrldsatateeeleqleaadealekaq 482
                  + +++++e+l+a++ +  + ka+ ++++++  +ql + +e +++++ + +  +++r + + ++l  +   ++++++ +aa+e l++a 
  MMETSP1325-20131115|7146_1  17 DQTIAEREEQLKALKMQLLKDKAEDRSKFSTAWAQLASAEEGAERRMLQGARTIAERFSTAPSQLSGVVSVAQLMLDAQAAEEPLHAAM 105
                 466788888888888888888999999**********99****************************9999999999999999998875 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0012
   PF12128.3 1070 delvqalrrvldilpsealvlniedl.ldlelslkEngsdliirndrqLkevSStGlsYLil 1130
                  d +    +rv+di+  +al   + +l l +e  l E+   ++ r  + L++  S G + L l
  MMETSP1325-20131115|7146_1  134 D-YNGVAARVVDIVRASALFPTMMQLaLAIETLLEEGCPLVVMRAKDRLNHPTSFGYADLLL 194 
                  4.6666789******9888877777659*****************************99987 PP

>> PF12731.2  Mating-type protein beta 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   2.7e-05      0.12      11      81 ..      17      87 ..       8     105 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.7e-05
   PF12731.2 11 DedvrqtLdalrkdFfssLrgesealstFlsawskfdellqschdsLseeTleliysfssliatvssglle 81
                D+++ ++ ++l++  +++L++  e  s+F +aw+++ +  +  + +  + +++ + +fs++ +++s  ++ 
  MMETSP1325-20131115|7146_1 17 DQTIAEREEQLKALKMQLLKDKAEDRSKFSTAWAQLASAEEGAERRMLQGARTIAERFSTAPSQLSGVVSV 87
                77777666666666677888888779*********************************998888766544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       499  (0.036498); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.40s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1005.53
//
Query:       MMETSP1325-20131115|7151_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 514.22
//
Query:       MMETSP1325-20131115|7152_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|7153_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   14.6   0.1      0.017   14.3   0.1    1.3  1  PF04405.9 Domain of Unknown function (DUF542)


Domain annotation for each model (and alignments):
>> PF04405.9  Domain of Unknown function (DUF542)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   1.3e-06     0.017      14      41 ..       5      32 ..       2      42 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.3e-06
   PF04405.9 14 raarvFrkygIDFCCgGkvsLaeAckek 41
                r ++vF + g+DF+  G++ L+ A+ ++
  MMETSP1325-20131115|7153_1  5 RQSEVFGETGLDFFVCGDQLLRGAALNA 32
                7899*****************9998655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 221.20
//
Query:       MMETSP1325-20131115|7149_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       680  (0.0497367); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 983.50
//
Query:       MMETSP1325-20131115|7155_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|7159_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       524  (0.0383265); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 784.69
//
Query:       MMETSP1325-20131115|7160_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-21   74.8   1.4    3.8e-21   74.7   1.0    1.0  1  PF03382.9 Mycoplasma protein of unknown function, DUF285


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   1.0   2.8e-25   3.8e-21      38      93 ..       1      56 [.       1      57 [] 0.94

  Alignments for each domain:
  == domain 1    score: 74.7 bits;  conditional E-value: 2.8e-25
   PF03382.9 38 fnqdiskWdtsnVtnmsemFsgatsfnqdiskwntsnVtnmssmFkgatsfnqdis 93
                fn+d+s Wd+s+V+ ms+mF++ tsfn dis w++s+V +m+ mF+gatsfn d+s
  MMETSP1325-20131115|7160_1  1 FNADLSGWDVSSVKYMSGMFARVTSFNADISGWDVSSVMDMDGMFDGATSFNADLS 56
                8999***********************************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 262.68
//
Query:       MMETSP1325-20131115|7162_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|7161_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.5   0.0       0.11   11.5   0.0    1.0  1  PF14234.1 Domain of unknown function (DUF4336)


Domain annotation for each model (and alignments):
>> PF14234.1  Domain of unknown function (DUF4336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     8e-06      0.11      54     136 ..       7      88 ..       1     106 [. 0.78

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8e-06
   PF14234.1  54 eggeVkhivlpta.alEHKvfvgplarkfpkAevwvapgqwsfPlnlplellgipktktleedsdavpwadeievkvLeplslg 136
                 +  +V   v+p + a    vf+  +a ++ k+ v   + q s+Pl  p++l g++++k    ++d++++a +  v+ L++   +
  MMETSP1325-20131115|7161_1   7 TASQVICLVVPDSlADPTTVFLLRAAAAYEKTVVIAHEPQSSYPLIWPADLDGVFRDKSVAFHTDHADYACKRLVAKLDSV--Q 88 
                 45566677777665777889**************************************99999999998866655555543..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 619.93
//
Query:       MMETSP1325-20131115|7164_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 540.36
//
Query:       MMETSP1325-20131115|7157_1  [L=472]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-55  186.2 129.3    4.7e-55  186.2  89.6    2.1  2  PF13868.1 Tumour suppressor, Mitostatin


Domain annotation for each model (and alignments):
>> PF13868.1  Tumour suppressor, Mitostatin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.1  17.7         1   1.4e+04      40      94 ..      49     105 ..      27     111 .. 0.35
   2 !  186.2  89.6   3.4e-59   4.7e-55       1     350 []     109     456 ..     109     456 .. 0.99

  Alignments for each domain:
  == domain 1    score: -7.1 bits;  conditional E-value: 1
   PF13868.1  40 errldemmeeerlkalaeeeerekkrkee..rregraeLeeQieerekrrqeeeeek 94 
                  +  +++++ er++a a+ +++++ +kee  +++++++ +e ++e++++  +e +ek
  MMETSP1325-20131115|7157_1  49 AENAAKEAALERKQAAARARQERMLKKEEdaKKKAKKSEIEIMKETREQTIRELAEK 105
                 222222222222222222222222222221112222222222333333322222222 PP

  == domain 2    score: 186.2 bits;  conditional E-value: 3.4e-59
   PF13868.1   1 eqseelrelneklkaAkvnkerdaqieekkrikeeekeeerrldemmeeerlkalaeeeerekkrkeerregraeLeeQieerekrrqeeeeeklqEreqmdeiierieeEdeaeaqekrekqkklreeiaefneerkelkeeekerereeeekileyqrekaereeereeerkerkeekerivarLraqqeeaedekeeldeLrakllqeeyerkeRqkekeeaekkrrlkqelkrareeqleekeerlqeereeeeeerermlekqaeeeeleqenaekrrkkreehrreleqqieekeekreeereeeleegeklkeeeaerqarieeeRqrlLkelaeallgylpk 350
                 e+ + ++ ln+   +A+ +++rd+q++ek  +++ ek++++r+d  me +rlk+l+++e+ e++r+ +r e r ++ eQ+  rek + + eee++qE+++m++ ++r+++Ed a a++++ + k+ r+e++++n++ +++ke+ k +e+eeee+il+yq++k+++ ++re+ ++e+++  ++++a+L a+qe+ +++++eldeLra++ qee+er+eR++e++eae k+  + e++ ar +q+++++ ++++e+ ++++e+e+++++ + e e+e  ++  + ++ + hr++l++qi++ e  r++++++++eeg++lk+e a ++a++e +R +++++++++  g+ pk
  MMETSP1325-20131115|7157_1 109 ENLDLVKMLNTLGARAAAFTIRDKQLAEKDGREQIEKNYNQRMDMLMEVDRLKELQQREQVEEARRLKRLEDRSVIVEQMRGREKYKMLLEEEREQENQAMLALMKRYQDEDTAAAEKRAVEVKRSRAEVMAANAQAIKRKEMAKLQEKEEEEAILAYQAKKDAEIAKREADEAEKARMAKERQAKLLAMQEKTQNKQAELDELRARRHQEEKERRERDRERAEAELKKTRMAEMAVARTQQAAQRKAMMAREAVMQQQEYEEAVRHAMVEMERESKEQSDKAEAAKIHREALQSQINAAEDYRKRHMNDKFEEGRRLKQEFASERAKLETIRDKMVADMQAK--GVNPK 456
                 78999**************************************************************************************************************************************************************************************************************************************************************************************************************************************************..*9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2902  (0.212259); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                       141  (0.010313); expected 13.7 (0.001)
Passed Fwd filter:                        41  (0.00299883); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.66u 0.34s 00:00:03.00 Elapsed: 00:00:01.34
# Mc/sec: 844.09
//
Query:       MMETSP1325-20131115|7166_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 314.52
//
Query:       MMETSP1325-20131115|7167_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.034   12.9   0.0      0.035   12.9   0.0    1.0  1  PF01062.16 Bestrophin, RFP-TM, chloride channel


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.6e-06     0.035      17      50 ..      22      55 ..      13      75 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.6e-06
  PF01062.16 17 rlllrwrgsilksilkellvflllyllvtliyif 50
                 l  rw+g++l ++++ +++f +l l+  +iy++
  MMETSP1325-20131115|7167_1 22 NLYSRWHGTVLSQVYQSVIFFDFLCLIFFIIYAV 55
                5788*********************999999943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       504  (0.0368637); expected 273.4 (0.02)
Passed bias filter:                      421  (0.0307929); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 402.79
//
Query:       MMETSP1325-20131115|7163_1  [L=324]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          3    8.0  11.2        0.2   11.7   3.9    2.1  2  PF07941.6 Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.2      0.82   1.1e+04      38      45 ..     184     191 ..     170     207 .. 0.61
   2 ?   11.7   3.9   1.5e-05       0.2      21      70 ..     239     295 ..     227     299 .. 0.64

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.82
                 TTXXXHHH CS
   PF07941.6  38 aaaaaava 45 
                 aa  a va
  MMETSP1325-20131115|7163_1 184 AAVGALVA 191
                 22222232 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 1.5e-05
                 -CCCHHHHHHHHHTTSSTTXXXHHHHSSX......SXXXXXXX.XXXXXXXSXXXXX CS
   PF07941.6  21 yaaqararererlahsraaaaaavaaata......aveGeGGs.GGGagvnaqtrqv 70 
                  +a arar+r r a s+ +a+aa + +        ++e    s GG + +  +t+q+
  MMETSP1325-20131115|7163_1 239 QTAAARARQRARVADSKRSATAASSVSLKgkfdplSLEKSLSSrGGSPSHVPPTQQA 295
                 5679************99888888754321111114455555546666665566666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       607  (0.0443973); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.35s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1362.14
//
Query:       MMETSP1325-20131115|7169_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-08   34.4   0.0    1.4e-08   34.3   0.0    1.0  1  PF00117.23 Glutamine amidotransferase class-I
  ------ inclusion threshold ------
        0.1   11.8   0.0       0.12   11.7   0.0    1.1  1  PF07722.8  Peptidase C26


Domain annotation for each model (and alignments):
>> PF00117.23  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0     2e-12   1.4e-08     117     185 ..       6      71 ..       2      78 .. 0.86

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 2e-12
                 CTTTTSEEEEEE-ESEEECSGHHHHTTEEEEEEESSS-EEEEEEECSSSBEEESSBTTCTTS-GGGHHH CS
  PF00117.23 117 lyglpnevivrhrHsyevnekellpeglevtaksedggeimaivekknpivgvQFHPEssstpggpell 185
                 l+g + + +v+++Hs+ v +    ++++++t ++  g+e ++ v+k + +v+ QFHPE+s+ +g  ++l
  MMETSP1325-20131115|7169_1   6 LDGVDGSDKVYFVHSFRVLP-TAANADWTLTTTTYGGSEYVSSVQKGD-VVAAQFHPEKSGATG-LRVL 71 
                 677777889**********9.779999*******8888*********9.**********99877.5555 PP

>> PF07722.8  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.7e-05      0.12     171     217 .]      15      61 ..       4      61 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.7e-05
                 EEEEEEEE-BHHHHH-EE.EEEEE----EEEEEEE--S-B----S-TT CS
   PF07722.8 171 vnslHhqaikelakglev.lAtaedgvieaieseeakyfvlgvQWHPE 217
                 v  +H + +   a +    l+t + g  e+++s + k+ v++ Q+HPE
  MMETSP1325-20131115|7169_1  15 VYFVHSFRVLPTAANADWtLTTTTYGGSEYVSSVQ-KGDVVAAQFHPE 61 
                 5667777777765555540456669**********.779********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 440.93
//
Query:       MMETSP1325-20131115|7165_1  [L=363]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-51  173.1   0.0    5.1e-51  172.5   0.0    1.3  1  PF01625.16 Peptide methionine sulfoxide reductase
    1.4e-06   28.1   0.0    4.7e-06   26.4   0.0    1.9  2  PF10262.4  Rdx family
  ------ inclusion threshold ------
      0.025   13.0   0.0      0.037   12.5   0.0    1.1  1  PF03071.10 GNT-I family


Domain annotation for each model (and alignments):
>> PF01625.16  Peptide methionine sulfoxide reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.5   0.0   1.1e-54   5.1e-51       2     154 ..      26     189 ..      25     191 .. 0.92

  Alignments for each domain:
  == domain 1    score: 172.5 bits;  conditional E-value: 1.1e-54
  PF01625.16   2 kavlaggCfWgveavfeklkGVisvevGYaggevenptYeevcsgktghaEaveveydpekvsyeellevffeihdptqlnrqgndigtqYrsaifytdeeqkkeaeelieklqke.........vkskkivteiepl.etFypaeeyhqdYleknpkr.ycsi 154
                  av+a+gC+Wg+e+ f +l+GV+s+ vG++gg+ +np+Y++ csg+tgh+E+ +v ydp+ +s+ +ll +f+++hdptq nrqgnd+gtqYrs+++++++++ + a ++++++q++         + + +  t+++++ +tF+ aeeyhq+Yl+k   r ycs+
  MMETSP1325-20131115|7165_1  26 VAVFAAGCYWGTEKAFWRLPGVYSTAVGFIGGHMANPSYRQACSGTTGHTECTQVVYDPALISFADLLLLFWRCHDPTQGNRQGNDRGTQYRSGVYTNNAADYEMAIASRDAFQAAlksrgrgriTSEIPDPTKMKQVqRTFWYAEEYHQQYLAKPGARpYCSA 189
                 69****************************************************************************************************************999986666443333445666666479***************99999975 PP

>> PF10262.4  Rdx family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.1   4.8e+03      15      28 ..     164     177 ..     158     190 .. 0.77
   2 !   26.4   0.0     1e-09   4.7e-06       3      68 ..     261     330 ..     259     336 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHH- CS
   PF10262.4  15 nraaelaqellstf 28 
                 +r  ++a+e  +++
  MMETSP1325-20131115|7165_1 164 QRTFWYAEEYHQQY 177
                 67778999888887 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 1e-09
                 EEEEE-TTTT-HHHHHHHHHHHHHH-------EEEE-....-----EEEEE---EEEETTT------HHH CS
   PF10262.4   3 vtieYCtkckwrnraaelaqellstfpedlievslqp....gtgGaFeVtlngeliwsrkekggfPeake 68 
                 v+++YC  c+++ +a++l   ++    e+ iev++ +    + +GaFeV +     w+   + gf e++e
  MMETSP1325-20131115|7165_1 261 VIVRYCGGCGFKAKAEQLGAVMERLLGENGIEVEVGLladvEVTGAFEVRVKRDEAWETVHSDGFVESRE 330
                 89******************99999988877766666668789***********************9987 PP

>> PF03071.10  GNT-I family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   8.1e-06     0.037     349     394 ..     236     281 ..     225     288 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 8.1e-06
  PF03071.10 349 slevkeakelqiddvvlkalkekgevriqykgrvdfeaiadklgil 394
                 ++++++a++lq + ++++al+ + +v+++y g   f+a+a++lg +
  MMETSP1325-20131115|7165_1 236 KADLERAQKLQAHALQTQALEAECDVIVRYCGGCGFKAKAEQLGAV 281
                 567899*************************************843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.55
# Mc/sec: 1581.60
//
Query:       MMETSP1325-20131115|7168_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-17   64.0   0.0    2.9e-17   62.8   0.0    1.6  2  PF04969.11 CS domain
    0.00041   19.8   0.0     0.0011   18.5   0.0    1.7  2  PF12957.2  Domain of unknown function (DUF3846)


Domain annotation for each model (and alignments):
>> PF04969.11  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.9   1.3e+04      39      55 ..      69      82 ..      61      82 .. 0.68
   2 !   62.8   0.0   4.3e-21   2.9e-17       2      78 .]     155     229 ..     154     229 .. 0.96

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.9
                EE---....EEE---BS CS
  PF04969.11 39 sikgpgekeyllegeLf 55
                s+ +   +++++ geLf
  MMETSP1325-20131115|7168_1 69 SCGH---QNVKFHGELF 82
                4433...7888888886 PP

  == domain 2    score: 62.8 bits;  conditional E-value: 4.3e-21
                 --EEEEETTEEEEEEE-------S-EEEEE----EEEEE---....EEE---BSS-EEEEEEEEEE---EEEEEEEE CS
  PF04969.11   2 rydWyQtleeVtitipvkgvikkedvkveikkkslkvsikgpgekeyllegeLfgeIdpeesswkiedtkieitLkK 78 
                 + +W+Qt e+V++ i v++++k++d+ v+ik + l+ ++k +   e+l++++L+++I p++s+w+++ + + itL+K
  MMETSP1325-20131115|7168_1 155 KLKWTQTAEDVEVVISVPDGTKGRDLAVTIKVRALSAKLKAT--GEVLCDLKLANDIHPDDSTWTVSADGLCITLEK 229
                 679************************************995..67******************************9 PP

>> PF12957.2  Domain of unknown function (DUF3846)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.6e-07    0.0011      21      75 ..      16      85 ..       3      88 .. 0.83
   2 ?   -2.8   0.0      0.68   4.6e+03      34      56 ..     207     231 ..     183     237 .. 0.58

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 1.6e-07
   PF12957.2 21 ealqalV.ggdievvsl........ddgvslvvneeGklkglplNraata......leeegdlqdpivGd 75
                +al ++  +g++e+  l        ++gv+++++e G lk+lp+N++  a      +++  ++++  vG 
  MMETSP1325-20131115|7168_1 16 RALTEATlDGSVETFALarpaevnkYQGVYIYLDEVGVLKQLPPNPRGNAlalscgHQNVKFHGELFVGR 85
                566666679999999999999999999********************99987777777777777777776 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.68
   PF12957.2  34 vsl.ddgvslvvneeGklkglp.lN 56 
                  ++ +d+ ++ v  +G++  l+  N
  MMETSP1325-20131115|7168_1 207 NDIhPDDSTWTVSADGLCITLEkAN 231
                 4444556667777777777666455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 1119.84
//
Query:       MMETSP1325-20131115|7171_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   12.9   0.0      0.051   12.9   0.0    1.0  1  PF04973.7 Nicotinamide mononucleotide transporter


Domain annotation for each model (and alignments):
>> PF04973.7  Nicotinamide mononucleotide transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.7e-06     0.051      51     110 ..       6      64 ..       1      68 [] 0.80

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.7e-06
   PF04973.7  51 lqifyllmqiyGwyqWkrkkeekeevkirkltkkerllllllalvvtlllglllkkftda 110
                  +i++ ++ ++ +  W + +++ +   ++++t + +l +l+++++++ + g + ++f+d+
  MMETSP1325-20131115|7171_1   6 GNILFNFAFVLTIPSWLN-EKKPDVGVTKTVTGSVWLSVLMFVALGWTAAGAFPHEFSDS 64 
                 456666666778899**5.4556788889999*********************9999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|7170_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.60
# Mc/sec: 351.47
//
Query:       MMETSP1325-20131115|7173_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2803  (0.205018); expected 273.4 (0.02)
Passed bias filter:                      595  (0.0435196); expected 273.4 (0.02)
Passed Vit filter:                        90  (0.0065828); expected 13.7 (0.001)
Passed Fwd filter:                        38  (0.0027794); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.91u 0.41s 00:00:01.32 Elapsed: 00:00:00.71
# Mc/sec: 519.77
//
Query:       MMETSP1325-20131115|7174_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-15   54.4   0.0    1.1e-14   54.2   0.0    1.0  1  PF00117.23 Glutamine amidotransferase class-I
    4.7e-10   39.1   0.0    6.8e-10   38.6   0.0    1.2  1  PF07685.9  CobB/CobQ-like glutamine amidotransferase domain
    9.5e-05   21.9   0.0    0.00012   21.6   0.0    1.1  1  PF01174.14 SNO glutamine amidotransferase family
  ------ inclusion threshold ------
       0.03   12.9   0.2      0.055   12.1   0.0    1.4  2  PF02423.10 Ornithine cyclodeaminase/mu-crystallin family


Domain annotation for each model (and alignments):
>> PF00117.23  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   0.0   3.2e-18   1.1e-14       2     106 ..      17     143 ..      16     154 .. 0.76

  Alignments for each domain:
  == domain 1    score: 54.2 bits;  conditional E-value: 3.2e-18
                 EEE-S-SSHHHHHHHHHHTT-EEEEEETTGGHHHHHHTTT--SEEEEE----TTTT......-CCHHHHHHHHGTTTS-EE------HHHHHH-TT.............EEE............TTC.CSEEEEEE CS
  PF00117.23   2 liDnydsvtknleralrelgvkvevvpndadaeeileklsnpdgilisgGpgspge......vegkieaikearenkiPiLGICLGmQllaiefgg.............kvi............kekkeehmggnm 106
                 l+D+++++++++ +a+ +lg+ ++ v   ++a+++       + +l+ +G+gs+g+        g +e ++ +  ++ P++G+CLGmQll++++++                            +  +++h g+n 
  MMETSP1325-20131115|7174_1  17 LLDYGAGNVRSVRNAISALGYAIHDVE--SEADIE------GASVLVFPGVGSFGSavevleSRGWVEPLRAYCRAGRPFFGVCLGMQLLFESSEEtpgaaglgvipgsV-ThfrtaaagavtdEYLTVPHIGWNG 143
                 89******************7766666..444444......789***************99955555555555556********************99888885555540.1444445555556555588888875 PP

>> PF07685.9  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.0     2e-13   6.8e-10       3      93 ..      46     129 ..      44     142 .. 0.89

  Alignments for each domain:
  == domain 1    score: 38.6 bits;  conditional E-value: 2e-13
   PF07685.9   3 elledadlvilpGgkntlqdlallresgldealkeaaeaggpvlgiCGGyqmLgekiedgieseaggekveglglLdietefekektlgqv 93 
                 +++e a ++++pG  +  ++ ++l+++g+ e l+++++ag+p +g+C G+q+L e+ e     e  g  ++glg+++ +++  ++ + g v
  MMETSP1325-20131115|7174_1  46 ADIEGASVLVFPGVGSFGSAVEVLESRGWVEPLRAYCRAGRPFFGVCLGMQLLFESSE-----ETPG--AAGLGVIPGSVTHFRTAAAGAV 129
                 6788999**************************************************8.....6666..8*******99987776666665 PP

>> PF01174.14  SNO glutamine amidotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   3.5e-08   0.00012       6      85 ..      23     102 ..      21     123 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 3.5e-08
                 --HHHHHHHHHH---EEEEE-SGGGGGG---EE-----C.CCHHHHHHHTT-HHHHHHHHHT-.--EE------TTTEEEE CS
  PF01174.14   6 GaveehveaikkclaenktvkrkedlaevdaliiPGGes.tamskliertglyedllefvknsekvvlGtCaGlillskel 85 
                 G+v+   +ai + +++   v ++ d+++   l+ PG  s  +   ++e  g++e+l+++ + + ++ +G C G+ ll +  
  MMETSP1325-20131115|7174_1  23 GNVRSVRNAISALGYAIHDVESEADIEGASVLVFPGVGSfGSAVEVLESRGWVEPLRAYCRAG-RPFFGVCLGMQLLFESS 102
                 788888999***************************66526788999**************99.**********9986654 PP

>> PF02423.10  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.45   1.5e+03     290     300 ..      32      42 ..      17      55 .. 0.70
   2 ?   12.1   0.0   1.6e-05     0.055     108     128 ..     118     138 ..     103     152 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 0.45
                 EE----HHHHH CS
  PF02423.10 290 fdstGlaveDv 300
                 ++ +G a++Dv
  MMETSP1325-20131115|7174_1  32 ISALGYAIHDV 42 
                 45667777776 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 1.6e-05
                 HHHHH-------HHHHHS-TT CS
  PF02423.10 108 lTalRTaAvsavaaKyLarkd 128
                 +T  RTaA++av+  yL +++
  MMETSP1325-20131115|7174_1 118 VTHFRTAAAGAVTDEYLTVPH 138
                 799**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 752.46
//
Query:       MMETSP1325-20131115|7176_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 498.07
//
Query:       MMETSP1325-20131115|7177_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.058   12.9   0.2       0.14   11.7   0.0    1.7  2  PF02183.13 Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0      0.73     1e+04      30      40 ..     110     120 ..     109     123 .. 0.61
   2 ?   11.7   0.0     1e-05      0.14      24      44 ..     221     241 ..     219     242 .. 0.93

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 0.73
  PF02183.13  30 kLraevlsLke 40 
                 +Lr e+ +  +
  MMETSP1325-20131115|7177_1 110 ALREEKGETMS 120
                 56777666655 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 1e-05
  PF02183.13  24 LqkEkekLraevlsLkeklqe 44 
                 Lqk++++Lr++++ L+ekl++
  MMETSP1325-20131115|7177_1 221 LQKDVAALRTMLQHLTEKLTA 241
                 9*****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       620  (0.0453482); expected 273.4 (0.02)
Passed bias filter:                      521  (0.0381071); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.63
# Mc/sec: 931.92
//
Query:       MMETSP1325-20131115|7181_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       87  (0.00636337); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 165.90
//
Query:       MMETSP1325-20131115|7182_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 594.10
//
Query:       MMETSP1325-20131115|7183_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-11   43.4   3.8     0.0066   16.9   0.1    3.4  3  PF08238.7 Sel1 repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.1   1.4e-05      0.19       7      39 .]       6      35 ..       1      35 [. 0.83
   2 !   14.2   0.0   3.3e-06     0.045       2      39 .]      37      71 ..      36      71 .. 0.88
   3 !   16.9   0.1   4.9e-07    0.0066       1      39 []      72     107 ..      72     107 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.4e-05
   PF08238.7  7 LGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 G   +y  G  Gv kd+e+A+  y+ A e G+
  MMETSP1325-20131115|7183_1  6 IG--DIYCFGK-GVAKDYERAMVAYKVAVEGGD 35
                68..5669998.8************99999886 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 3.3e-06
   PF08238.7  2 eAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 +q++    y yl+Gl Gv  ++++ + W+ekAA+q++
  MMETSP1325-20131115|7183_1 37 LSQCQIS--YVYLTGL-GVAVNHQQVRPWLEKAAAQDD 71
                5789999..889***9.9****999999*******985 PP

  == domain 3    score: 16.9 bits;  conditional E-value: 4.9e-07
   PF08238.7   1 aeAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                 + A ++LG   my+ G  Gv++  + Al + ++A e+G+
  MMETSP1325-20131115|7183_1  72 PYAINALG--AMYFQGK-GVTPSWRSALALSKRAIELGY 107
                 6899****..888***9.9**99*************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|7184_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.8   0.5      0.018   15.5   0.4    1.2  1  PF13007.2  Transposase C of IS166 homeodomain
        0.1   12.4   0.1       0.13   12.0   0.0    1.1  1  PF00241.15 Cofilin/tropomyosin-type actin-binding protein


Domain annotation for each model (and alignments):
>> PF13007.2  Transposase C of IS166 homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.4   2.6e-06     0.018      15      67 ..      26      79 ..      14      86 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2.6e-06
   PF13007.2 15 FGrkSEkldarqieQleLfeeleaaaaeaeaeaeeaaaetaa..rrrkrrkpgRk 67
                FG +  kl  + ++  eL e l a+  +a+aea++   +++a  +++kr+ +gR+
  MMETSP1325-20131115|7184_1 26 FGISFDKL-VEVTDTAELDETLAAELSAAAAEAPPGSMQHVAtdTKPKRPGRGRG 79
                67777777.6667788887777777777777777777777775433333334444 PP

>> PF00241.15  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.9e-05      0.13      81     120 ..       1      45 [.       1      50 [. 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.9e-05
                 TTS-HHHCHHHHHCCHHHHHHH--.....--EEEEES-GGGGSHH CS
  PF00241.15  81 dgApvkkkmlyASskdalkkslkg.....ikvevqatdasdlsee 120
                 ++A+++ km y+  k++l  s +       +  v++td  +l+e 
  MMETSP1325-20131115|7184_1   1 ENANLRLKMTYSTAKATLLASASDdfgisFDKLVEVTDTAELDET 45 
                 689**************9999988778444445788899999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 422.89
//
Query:       MMETSP1325-20131115|7185_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-05   21.8   0.4         12    6.2   0.0    4.1  4  PF00560.28 Leucine Rich Repeat
    0.00014   21.2   0.3       0.07   12.6   0.0    3.3  2  PF12799.2  Leucine Rich repeats (2 copies)
     0.0042   16.8   0.6         17    5.7   0.0    4.1  4  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
      0.015   14.8   1.8       0.53    9.9   0.1    2.8  3  PF13855.1  Leucine rich repeat
      0.066   13.3   1.8         18    6.0   0.1    3.9  4  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.2   3.3e+03       2      10 ..      73      81 ..      72      82 .. 0.83
   2 !    6.1   0.0    0.0047        13       2      10 ..      96     104 ..      95     119 .. 0.90
   3 !    6.2   0.0    0.0044        12       1      20 [.     120     140 ..     120     142 .. 0.86
   4 ?    4.5   0.0     0.016        43       2      21 ..     144     164 ..     143     165 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.2
                ESEEEETSS CS
  PF00560.28  2 LeeLdLsgN 10
                L+eL++  +
  MMETSP1325-20131115|7185_1 73 LKELNMKEC 81
                99***9877 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0047
                 ESEEEETSS CS
  PF00560.28   2 LeeLdLsgN 10 
                 L+eL+Ls++
  MMETSP1325-20131115|7185_1  96 LQELNLSRC 104
                 9*******9 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.0044
                 TESEEEETSS.BCB.CHHHHHH CS
  PF00560.28   1 nLeeLdLsgN.nlt.slppsls 20 
                 ++++L+L  + +l+ ++ + l+
  MMETSP1325-20131115|7185_1 120 SITHLNLEQCwKLEgHIES-LK 140
                 579***********99988.65 PP

  == domain 4    score: 4.5 bits;  conditional E-value: 0.016
                 ESEEEETSS.BCB.CHHHHHHH CS
  PF00560.28   2 LeeLdLsgN.nlt.slppslsn 21 
                 L++L L g+  l+ +++  + n
  MMETSP1325-20131115|7185_1 144 LTSLILYGCqELKgNIQA-FAN 164
                 899*********999998.877 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.023        64      20      32 ..      67      79 ..      58      91 .. 0.82
   2 !   12.6   0.0   2.5e-05      0.07       3      24 ..      96     125 ..      96     164 .. 0.65

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.023
   PF12799.2 20 lanLpnLktLnLs 32
                +a+L+ Lk+Ln+ 
  MMETSP1325-20131115|7185_1 67 FASLKELKELNMK 79
                8899999999975 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 2.5e-05
   PF12799.2   3 LevLdLsnN........nIkdlppelanLp 24 
                 L++L+Ls++        nIkdlp ++  L+
  MMETSP1325-20131115|7185_1  96 LQELNLSRCgavyddygNIKDLPQSITHLN 125
                 9********999999999999997744331 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         2   5.6e+03       2       9 ..      71      78 ..      70      83 .. 0.74
   2 !    5.7   0.0    0.0061        17       4      13 ..      96     105 ..      94     112 .. 0.88
   3 ?    4.0   0.0     0.022        61       2      12 ..     119     129 ..     118     140 .. 0.88
   4 ?    2.2   0.0     0.082   2.3e+02       4      14 ..     144     155 ..     143     164 .. 0.74

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 2
   PF13516.1  2 knLtsLdL 9 
                k L++L++
  MMETSP1325-20131115|7185_1 71 KELKELNM 78
                56899986 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0061
   PF13516.1   4 LtsLdLsnNq 13 
                 L++L+Ls+++
  MMETSP1325-20131115|7185_1  96 LQELNLSRCG 105
                 9*******97 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.022
   PF13516.1   2 knLtsLdLsnN 12 
                 +++t+L+L ++
  MMETSP1325-20131115|7185_1 119 QSITHLNLEQC 129
                 689*****998 PP

  == domain 4    score: 2.2 bits;  conditional E-value: 0.082
   PF13516.1   4 LtsLdLsnNq.i 14 
                 LtsL L ++q +
  MMETSP1325-20131115|7185_1 144 LTSLILYGCQeL 155
                 99*******953 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00019      0.53      21      59 ..      67     104 ..      63     105 .. 0.86
   2 ?   -0.1   0.0      0.26     7e+02      49      58 ..     119     128 ..     112     132 .. 0.72
   3 ?    3.3   0.1     0.022        60       3      48 ..     121     165 ..     119     170 .] 0.64

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00019
   PF13855.1  21 FkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59 
                 F +l+ Lk+L+ +++   + + e++k++  L+eLnLs +
  MMETSP1325-20131115|7185_1  67 FASLKELKELNMKECYGATGDIESLKDC-PLQELNLSRC 104
                 7889999999999999999999999999.6999999875 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.26
   PF13855.1  49 psLreLnLsg 58 
                 +s+++LnL++
  MMETSP1325-20131115|7185_1 119 QSITHLNLEQ 128
                 4677777765 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.022
   PF13855.1   3 LkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsgnnlksispeafkgL 48 
                 +++L+L ++ +l+ +i+  ++k+++ L++L L g+     + +af+++
  MMETSP1325-20131115|7185_1 121 ITHLNLEQCwKLEgHIE--SLKDMP-LTSLILYGCQELKGNIQAFANM 165
                 67788888866664444..888888.8888887554444445566666 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.19   5.2e+02       3      11 ..      73      81 ..      69     100 .. 0.45
   2 ?    6.0   0.1    0.0065        18       3      12 ..      96     105 ..      94     118 .. 0.74
   3 ?   -0.7   0.0         1   2.8e+03       4      11 ..     122     129 ..     119     140 .. 0.67
   4 ?    2.7   0.0     0.076   2.1e+02       3      14 ..     144     156 ..     142     159 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.19
   PF13504.1  3 LkeLdLsgn 11
                LkeL+   +
  MMETSP1325-20131115|7185_1 73 LKELNMKEC 81
                556655333 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0065
   PF13504.1   3 LkeLdLsgnr 12 
                 L+eL+Ls+++
  MMETSP1325-20131115|7185_1  96 LQELNLSRCG 105
                 89*******4 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1
   PF13504.1   4 keLdLsgn 11 
                 + L+L  +
  MMETSP1325-20131115|7185_1 122 THLNLEQC 129
                 78899888 PP

  == domain 4    score: 2.7 bits;  conditional E-value: 0.076
   PF13504.1   3 LkeLdLsgnr.Lt 14 
                 L+ L L g++ L+
  MMETSP1325-20131115|7185_1 144 LTSLILYGCQeLK 156
                 899******9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.32s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 714.70
//
Query:       MMETSP1325-20131115|7190_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.2   0.1      0.015   15.2   0.0    1.1  1  PF03297.10 S25 ribosomal protein


Domain annotation for each model (and alignments):
>> PF03297.10  S25 ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   1.1e-06     0.015       9      55 ..      14      62 ..       4      70 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.1e-06
  PF03297.10  9 keakaaaasaggkakkKkWskgkvkdklnnavlld..katydkllkevp 55
                ++a+++ +s gg ++kK+ skg++k k   a ll   + ++d+++ +  
  MMETSP1325-20131115|7190_1 14 RAASTSDSSPGGGSSKKRSSKGRKKPKDVSAFLLAqhQRQQDRIADDYA 62
                5666777888999**************9888887634677899988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|7192_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 254.93
//
Query:       MMETSP1325-20131115|7191_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 635.77
//
Query:       MMETSP1325-20131115|7186_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 1577.60
//
Query:       MMETSP1325-20131115|7188_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.50
# Mc/sec: 1639.11
//
Query:       MMETSP1325-20131115|7198_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00014   21.7  11.3    0.00014   21.7   7.8    1.5  2  PF07974.8 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   7.8   1.1e-08   0.00014       1      32 []      18      45 ..      18      45 .. 0.92
   2 ?   -2.8   0.0      0.49   6.6e+03      23      26 ..      50      53 ..      49      55 .. 0.67

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 1.1e-08
   PF07974.8  1 CsadgliCgghGtCvkq.cgkCvCdsgyqGktC 32
                C++    C+g+G C       C C++++qG++C
  MMETSP1325-20131115|7198_1 18 CPN---ACSGNGVCSAYdM--CTCYRNFQGADC 45
                985...4********9977..************ PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.49
   PF07974.8 23 Cdsg 26
                C++g
  MMETSP1325-20131115|7198_1 50 CPFG 53
                7776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 347.23
//
Query:       MMETSP1325-20131115|7199_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.5e-12   45.0   0.2    1.9e-11   43.5   0.1    1.7  1  PF08645.6 Polynucleotide kinase 3 phosphatase


Domain annotation for each model (and alignments):
>> PF08645.6  Polynucleotide kinase 3 phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.1   1.4e-15   1.9e-11      86     158 .]       5      89 ..       1      89 [. 0.67

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 1.4e-15
   PF08645.6  86 yaAtkkdkyRKP.etGmweelkkdlee..............kleidkeksfyvGDaagrkkkkkDfsdsDkkFAknvgikFltPeeff 158
                 ++A++kd++ K   tGmw++ ++ l                  + + e sf+vGDaagr   ++D+sd D++FA  +g+kF+t  eff
  MMETSP1325-20131115|7199_1   5 LVALSKDNNHKSiGTGMWDAATSILVGrpgydgpndangygAQQRSFEGSFHVGDAAGR---PRDHSDDDRAFARRAGLKFYTETEFF 89 
                 56666665555425677777666554444333333332222223334466*********...*************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 438.58
//
Query:       MMETSP1325-20131115|7200_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-12   45.1   4.1    5.7e-12   44.9   2.8    1.0  1  PF04515.7 Plasma-membrane choline transporter


Domain annotation for each model (and alignments):
>> PF04515.7  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   2.8   4.2e-16   5.7e-12      53     145 ..       2      97 ..       1     102 [. 0.79

  Alignments for each domain:
  == domain 1    score: 44.9 bits;  conditional E-value: 4.2e-16
   PF04515.7  53 vlllafivlwivvavalytsgepkeknsskstsege.....ssgvevkldk.....klilllvyllfgllWtsevikavsqvtiagvvaswYfagkkr.dvpkf 145
                 ++l++f+v w++ + ++ ++g +++++++++ +++      +        +         ++v+++f+++Wtse+i+a++q+++a +++ wYfa++ + +  ++
  MMETSP1325-20131115|7200_1   2 AALMLFLVPWMYYLCYTQAQGHFEGNKYGNTSETQVwvwdnT--------SpvegvDSNQIQVFMMFCYFWTSEFISAIGQLVLALTFVLWYFAENPPaETIEK 97 
                 6889*********************99987655443664431........2333336677899*******************************9987743333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 557.52
//
Query:       MMETSP1325-20131115|7197_1  [L=549]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-49  165.6  35.4    8.5e-29   99.8   5.0    2.8  3  PF01699.19 Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.33   4.5e+03      56      80 ..      26      50 ..       9      55 .. 0.71
   2 !   99.8   5.0   6.2e-33   8.5e-29       4     138 ..     122     251 ..     119     252 .. 0.95
   3 !   74.5  11.5   3.8e-25   5.2e-21       1     138 [.     391     527 ..     391     528 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.33
  PF01699.19 56 lalgsivGSalfnlllviglcvlis 80
                 a+g ++ S ++ + lv++ ++li+
  MMETSP1325-20131115|7197_1 26 RAVGFALASGVAAVWLVVASVGLIG 50
                4666666777777777777777765 PP

  == domain 2    score: 99.8 bits;  conditional E-value: 6.2e-33
  PF01699.19   4 slladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkg.agdlalgsivGSalfnlllviglcvlisplgekriqkvlvfkvtldfsflllvllllllivllsdgrltvweglvllllyilylvl 138
                  ++ +++v+s+e i++ l+ls+ v+g+t+lA+g+sapEl++s++  + g + + ++g+ivGSa+fn+l++++l++ +++       ++++++v +d++f+ l ++ll+++++  dg++  weg++++++y+ly+ +
  MMETSP1325-20131115|7197_1 122 LVCDEWFVPSLEMISEKLQLSPDVAGATFLAAGSSAPELFTSVADTFAGeSEGFGMGTIVGSAMFNILVIVALSAAATTEV----LTIDWRPVCRDCGFYSLSIILLIIFMI--DGEIATWEGVIMVICYGLYITF 251
                 57899*******************************************98899***********************99885....57****************999999999..*******************987 PP

  == domain 3    score: 74.5 bits;  conditional E-value: 3.8e-25
  PF01699.19   1 llislladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkgagdlalgsivGSalfnlllviglcvlisplgekriqkvlvfkvtldfsflllvllllllivll..sdgrltvweglvllllyilylvl 138
                 ++i l+  ++v +++ i+++++++ tv+g+ +lA gts+p+ + s+++a +g++d+a++++vGS++f++ll++g+++++ ++ ++    + v+k + ++ +++l+ ++ l+++ l  ++++++   glv+++lyi+y ++
  MMETSP1325-20131115|7197_1 391 VWIGLVCLFMVVCASRIGCIMNVNATVMGICVLAVGTSVPDAMGSMAVAANGEADMAIANAVGSNVFDILLGLGVPWMLNGAIKG---ATVVDKCGIEVAVFILFSTIGLFFLTLilNKWQMNNRLGLVFFALYIVYYIY 527
                 69999999**************************************************************************865...77777777777777777544444444478********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       643  (0.0470304); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.89u 0.38s 00:00:01.27 Elapsed: 00:00:00.57
# Mc/sec: 2268.28
//
Query:       MMETSP1325-20131115|7201_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|7204_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-50  170.9   0.0      3e-50  170.8   0.0    1.0  1  PF00285.16 Citrate synthase
  ------ inclusion threshold ------
      0.043   13.9   0.0      0.057   13.5   0.0    1.2  1  PF04538.7  Brain expressed X-linked like family


Domain annotation for each model (and alignments):
>> PF00285.16  Citrate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.8   0.0   4.4e-54     3e-50     161     273 ..       3     115 ..       1     116 [] 0.97

  Alignments for each domain:
  == domain 1    score: 170.8 bits;  conditional E-value: 4.4e-54
                 ---..-TTHHHHHHHHHHHS--SS-HHHHHHHHHHTTT--HHHHH---------------TTTHHHHHHH---GGGHHHHHHHHHHHT---------S-SS--HHHHHHHHHH CS
  PF00285.16 161 geepseeeaealdlalilhaDHglnaSTftarvvaStlsdlysavsaaigaLkGplHGgAneevlkmleeigseeeveeyiekaldkgerimGfGHrvYkteDPRakilkela 273
                 + ep+++ ++ald+++ilh+DH+ln+ST+++r vaS+++d++s+++a+++aL GplHGgAne+vl+mleeigs ++v +++++++ +++++mGfGHrvY++ DPRa++l+  a
  MMETSP1325-20131115|7204_1   3 DYEPHPDLVRALDVVFILHCDHELNCSTAAVRHVASAGTDPFSSLAAGMAALYGPLHGGANEAVLRMLEEIGSVDNVPRFLQDVKTRKRKLMGFGHRVYRNFDPRANVLRAHA 115
                 56899********************************************************************************************************9876 PP

>> PF04538.7  Brain expressed X-linked like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   8.3e-06     0.057      64      98 ..      71     105 ..      62     107 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 8.3e-06
   PF04538.7  64 emireadelerfqeeirkvrnKlrimhwkqrdsrd 98 
                 e i  +d++ rf  +++  ++Kl+++ +   +++d
  MMETSP1325-20131115|7204_1  71 EEIGSVDNVPRFLQDVKTRKRKLMGFGHRVYRNFD 105
                 66788*********************999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 567.30
//
Query:       MMETSP1325-20131115|7205_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 298.49
//
Query:       MMETSP1325-20131115|7193_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.083   12.9   9.6      0.084   12.9   6.6    1.1  1  PF03247.9 Prothymosin/parathymosin family
       0.76    9.9   3.5        0.9    9.7   2.4    1.2  1  PF13922.1 PHD domain of transcriptional enhancer, Asx
        3.7    6.9   6.8        4.6    6.6   4.7    1.1  1  PF04281.8 Mitochondrial import receptor subunit Tom22
        4.1    4.9   7.4        4.6    4.7   5.1    1.0  1  PF04931.8 DNA polymerase phi
        4.9    5.1  10.8        4.5    5.2   7.5    1.1  1  PF09606.5 ARC105 or Med15 subunit of Mediator complex non-fungal


Domain annotation for each model (and alignments):
>> PF03247.9  Prothymosin/parathymosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   6.6   3.1e-05     0.084      47      87 ..       3      43 ..       1      60 [. 0.68

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.1e-05
   PF03247.9 47 addeedeeeekeeedeeeegegeeeeeeeeeeeegatvkra 87
                +++++++++++++++ee+e+     +ee+ee  eg    ra
  MMETSP1325-20131115|7193_1  3 QQQQQQQQQQQQQGEEEDEDSSGWSDEEDEEGXEGPGASRA 43
                33444555555666666666666677777787888777776 PP

>> PF13922.1  PHD domain of transcriptional enhancer, Asx
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.4   0.00033       0.9       5      23 ..       2      20 ..       1      45 [. 0.47

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00033
   PF13922.1  5 qkqqqqqkllvqnqsgent 23
                q+qqqqq++++q+q +e++
  MMETSP1325-20131115|7193_1  2 QQQQQQQQQQQQQQGEEED 20
                2222222222222222222 PP

>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   4.7    0.0017       4.6      15      44 ..       3      32 ..       1      42 [. 0.38

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0017
   PF04281.8 15 keaaakekaeeesddeeedeedtdsdisdd 44
                +++++++++++++ +ee+++++  sd++d+
  MMETSP1325-20131115|7193_1  3 QQQQQQQQQQQQQGEEEDEDSSGWSDEEDE 32
                222222222222222333333333443333 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   5.1    0.0017       4.6     636     668 ..       5      37 ..       2      42 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0017
   PF04931.8 636 enkkeleklfeGEeeeedaleetDddedelkei 668
                  ++++ ++  +GEee+ed  + +D + +e  e+
  MMETSP1325-20131115|7193_1   5 QQQQQQQQQQQGEEEDEDSSGWSDEEDEEGXEG 37 
                 5677888899************99988886665 PP

>> PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   7.5    0.0017       4.5     365     380 ..       3      18 ..       1      69 [. 0.41

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0017
   PF09606.5 365 qqaqqqqqqqegqqqa 380
                 qq+qqqqqqq++q ++
  MMETSP1325-20131115|7193_1   3 QQQQQQQQQQQQQGEE 18 
                 1111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1239  (0.0906232); expected 273.4 (0.02)
Passed bias filter:                      923  (0.0675102); expected 273.4 (0.02)
Passed Vit filter:                       167  (0.0122147); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.47s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|7207_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          2    8.9  10.3        0.1   13.1   2.9    1.7  2  PF13007.2 Transposase C of IS166 homeodomain


Domain annotation for each model (and alignments):
>> PF13007.2  Transposase C of IS166 homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.3      0.14   1.9e+03      61      68 ..       4      11 ..       2      15 .. 0.78
   2 ?   13.1   2.9   7.4e-06       0.1      34      71 ..      25      62 ..      15      64 .. 0.77

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.14
   PF13007.2 61 rrkpgRkp 68
                rrkp+Rk+
  MMETSP1325-20131115|7207_1  4 RRKPKRKE 11
                78888884 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 7.4e-06
   PF13007.2 34 eeleaaaaeaeaeaeeaaaetaarrrkrrkpg.RkpLpa 71
                e+le  a+e+e +++++a ++ + +r++++pg R+ Lp+
  MMETSP1325-20131115|7207_1 25 EDLEGPATETEGPPPPPAVPKLR-KRPKPPPGrRRVLPK 62
                89*********999999999999.666666661555575 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.45
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|7206_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-06   26.2   0.1    5.4e-06   25.7   0.0    1.3  1  PF08711.6  TFIIS helical bundle-like domain
  ------ inclusion threshold ------
       0.15   11.2   2.7        0.2   10.9   1.9    1.3  1  PF05308.6  Mitochondrial fission regulator
        1.2    8.2   3.6        1.6    7.8   2.5    1.3  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF08711.6  TFIIS helical bundle-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   1.2e-09   5.4e-06       2      44 ..     115     156 ..     114     159 .. 0.93

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 1.2e-09
   PF08711.6   2 lLkvLkklpitlelLkeTgiGkaVnklrkhteneevrklAkkL 44 
                 lL++ +kl +t+elL+++giG++V +l +  ++e+ + lA+++
  MMETSP1325-20131115|7206_1 115 LLRRASKLTVTVELLQASGIGRVVGALVRA-PDEKTQLLAREI 156
                 7888899***********************.***999999997 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.9   4.3e-05       0.2     168     204 ..      48      83 ..      15     122 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4.3e-05
   PF05308.6 168 kssstasvvisdpteepelevp....pppppPpPlpavslq 204
                 ++s+t++v       +p+lev+    ppp+pP P+p +++ 
  MMETSP1325-20131115|7206_1  48 APSTTPAVS-A----TPSLEVSgergPPPLPPTPPPGPPTP 83 
                 222222222.2....23333333344777777777665543 PP

>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.5   0.00035       1.6     216     242 ..      52      85 ..      38     131 .. 0.59

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00035
                 --CSC--XXXXXXXXXXX......XXX.XXXXXX CS
  PF01213.14 216 aaaksalaavsasktaaP......ppP.pppppP 242
                 ++a+sa+++++ s+   P      ppP pp+ppP
  MMETSP1325-20131115|7206_1  52 TPAVSATPSLEVSGERGPpplpptPPPgPPTPPP 85 
                 5677888888877777663444433332333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 867.48
//
Query:       MMETSP1325-20131115|7208_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 443.58
//
Query:       MMETSP1325-20131115|7211_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-05   24.9   0.0    1.5e-05   24.8   0.0    1.1  1  PF00657.17 GDSL-like Lipase/Acylhydrolase
     0.0036   17.3   0.0     0.0042   17.1   0.0    1.1  1  PF13472.1  GDSL-like Lipase/Acylhydrolase family
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.14   11.8   0.0    1.2  1  PF06692.6  Melon necrotic spot virus P7B protein


Domain annotation for each model (and alignments):
>> PF00657.17  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   3.3e-09   1.5e-05     187     234 .]       3      44 ..       1      44 [. 0.86

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 3.3e-09
                 HHCTEEEEEHHHHHHHCHHHGGGHHHTCCCSSTTSB-CCCHHHHHHHH CS
  PF00657.17 187 keanvkyvDiysifqeldglqnpenssylfwDgfHptekghkavaeal 234
                 ke ++++v+++ ++q+ ++ +++     ++ Dg+H++++g+++vaea+
  MMETSP1325-20131115|7211_1   3 KELGLPCVNLWDQMQAAGS-WHS-----FLCDGLHLSPEGNEFVAEAV 44 
                 57789**********9954.443.....9*****************86 PP

>> PF13472.1  GDSL-like Lipase/Acylhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   9.2e-07    0.0042     139     177 ..       2      38 ..       1      40 [. 0.89

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 9.2e-07
   PF13472.1 139 AaaygvtyvdlaaafadhegwdkdllapdglHPnaaGya 177
                  +++g++ v+l++ ++ +++w+  ++  dglH++++G++
  MMETSP1325-20131115|7211_1   2 GKELGLPCVNLWDQMQAAGSWH--SFLCDGLHLSPEGNE 38 
                 5789*************99986..689**********97 PP

>> PF06692.6  Melon necrotic spot virus P7B protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.1e-05      0.14      31      54 ..      31      54 ..      22      60 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.1e-05
   PF06692.6 31 slspqGntyvhhfdnssvktqyvG 54
                 lsp Gn +v     ss+k  y  
  MMETSP1325-20131115|7211_1 31 HLSPEGNEFVAEAVASSIKGAYPA 54
                59*****************99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|7210_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.099   11.5   0.0       0.11   11.3   0.0    1.0  1  PF01591.13 6-phosphofructo-2-kinase


Domain annotation for each model (and alignments):
>> PF01591.13  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.3e-06      0.11     125     171 ..      40      86 ..      25      90 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 8.3e-06
  PF01591.13 125 kvlflesvcsdeeiikeNikevklsspDYkdketeeaikdflkRlen 171
                   l++++   d+++ ++N++ +++ s+D  ++  ++++  f++R+ +
  MMETSP1325-20131115|7210_1  40 ADLLVQVARADHALAAHNVMAASTLSDDGDGTAANQTVPTFAHRVYC 86 
                 56899***************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 434.89
//
Query:       MMETSP1325-20131115|7214_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 856.57
//
Query:       MMETSP1325-20131115|7213_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 688.95
//
Query:       MMETSP1325-20131115|7215_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-08   32.0   0.4    1.4e-05   24.4   0.0    2.1  2  PF02431.10 Chalcone-flavanone isomerase


Domain annotation for each model (and alignments):
>> PF02431.10  Chalcone-flavanone isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.1   0.00039       5.3      29      52 ..       7      30 ..       2      59 .. 0.80
   2 !   24.4   0.0     1e-09   1.4e-05     120     196 ..      72     144 ..      63     150 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.00039
  PF02431.10 29 vkvYaiGlYlaksdisklasklkg 52
                vk+Y++G+Y  ++ ++++++k+ g
  MMETSP1325-20131115|7215_1  7 VKIYGAGYYASPKVLKEASEKKGG 30
                9************66666665544 PP

  == domain 2    score: 24.4 bits;  conditional E-value: 1e-09
  PF02431.10 120 leefkelf..ksrgsvpkgssllltrsakgslkvsfskegkkpeeelgevkdervsralllqylaGkkpvSeeakksva 196
                 +e f++l+  + +g ++kg+s++l++ ++g++ ++        ++++ge+kd+ +   l ++yl G+kpvS+++ +++ 
  MMETSP1325-20131115|7215_1  72 IESFQTLLlnGMDGFMKKGESMTLEFGPRGEVVLVTVR-----GKKVGEMKDKALHAGLKEMYL-GSKPVSQALVRDME 144
                 6778888777788899**************98865552.....5579*****************.*******9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 728.49
//
Query:       MMETSP1325-20131115|7217_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.054   13.2   0.0      0.079   12.6   0.0    1.3  1  PF00023.25 Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.8e-06     0.079      16      33 .]       2      19 ..       1      19 [. 0.92

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.8e-06
                HHHHHHHHTTSSTTHBHT CS
  PF00023.25 16 evvklLlsqGAdlnaqdd 33
                +v+++Ll++GAd ++ d+
  MMETSP1325-20131115|7217_1  2 QVCQFLLEAGADKDIPDK 19
                79************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        93  (0.00680222); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.86
# Mc/sec: 186.69
//
Query:       MMETSP1325-20131115|7218_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 337.67
//
Query:       MMETSP1325-20131115|7219_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-09   37.2   0.1      2e-09   37.0   0.0    1.0  1  PF00481.16 Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0   1.5e-13     2e-09       5      87 ..      27     106 ..      24     110 .] 0.87

  Alignments for each domain:
  == domain 1    score: 37.0 bits;  conditional E-value: 1.5e-13
                 --TCCCCCHHHHHHHHH----SSTHCCCHHCCCHCCCHHHHHHHHHCHHHHHHHHHHHHHHTTXX..XXGGHCHHHHHH.HHCH CS
  PF00481.16   5 aselqgfrksmedahialknlekssgkssvaffavfdghggreaakyarehleeilkerksflele.klekalrksfladtdee 87 
                 +se q+ r+ med+h   k      g+++++ f+vfdghgg++a+k++++++ + l+ + +++  + k e+alr++ +  t+ +
  MMETSP1325-20131115|7219_1  27 VSEEQNTREYMEDTHDVFKAI---AGDENINAFGVFDGHGGEKASKFCSNKMLPTLDANMQTPVQRaKPEDALRRTMMD-TAAH 106
                 7899***********999955...59***************************88888888887777*******99988.6655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 527.20
//
Query:       MMETSP1325-20131115|7220_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-31  106.3   0.1    9.7e-21   73.8   0.1    2.2  2  PF00725.17 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
     0.0089   15.4   0.0       0.02   14.3   0.0    1.5  1  PF03020.10 LEM domain


Domain annotation for each model (and alignments):
>> PF00725.17  3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.1   1.4e-24   9.7e-21       1      97 []      28     126 ..      28     126 .. 0.88
   2 !   30.5   0.0   4.6e-11   3.1e-07       4      85 ..     161     245 ..     160     249 .] 0.90

  Alignments for each domain:
  == domain 1    score: 73.8 bits;  conditional E-value: 1.4e-24
                 ---HHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHH.-------HHHHHH---HHHHHHHH.....HHHCTCCCH...GG-..HHHHHHHHTT-----------EC CS
  PF00725.17   1 GFvvnRvlapllneairlveegvatpediDaamkkglGlpmGpfelsdlvgldvakkile.....vlaeelger...ayapsplleklveagrlgrktgkgfyky 97 
                 GF+vnR+l+pl+ e  +l+ +g + +e++D+ + k +G+p+Gp++l+d+vg+dva++++e           g r     ++ ++l ++ve+g lg+k+gkgf+ y
  MMETSP1325-20131115|7220_1  28 GFYVNRCLGPLMVETTALISHG-VGIEQLDKEILK-YGMPVGPITLVDEVGIDVANHVREflsnaD----MGVRmqgGGTDVNVLGEMVEKGFLGKKSGKGFFVY 126
                 9*********************.*********999.9***********************755542....3333444444567*******************977 PP

  == domain 2    score: 30.5 bits;  conditional E-value: 4.6e-11
                 HHHHHHHHHHHHHHHHHTTSS.-HHHHHHHHHH.---.-..---HHHHHH---HHHHHHHHHHHCTCCCHGG-..HHHHHHHHTT- CS
  PF00725.17   4 vnRvlapllneairlveegva.tpediDaamkkglGl.p..mGpfelsdlvgldvakkilevlaeelgerayapsplleklveagr 85 
                  nR+l +++nea+ ++++gv+ +p d D  +  g+G+ p   Gpf+++d  g+d   ++++ +a+++g + ++p++l+++++++++
  MMETSP1325-20131115|7220_1 161 RNRLLSRFVNEAVLCLQDGVLeNPHDGDIGAVFGCGFlPytGGPFRMLDAHGIDKYCDMMSGFADKYGAQ-FEPCQLMKDMARENK 245
                 6******************98459999999999999744447**************************99.999*******99886 PP

>> PF03020.10  LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   2.9e-06      0.02      10      26 ..      54      70 ..      53      71 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.9e-06
                HHHHHHCCTT------- CS
  PF03020.10 10 ELrseLrkyGispGPit 26
                 L +e  kyG+++GPit
  MMETSP1325-20131115|7220_1 54 QLDKEILKYGMPVGPIT 70
                68999***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 1125.84
//
Query:       MMETSP1325-20131115|7216_1  [L=866]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   5.4e-157  523.7   3.5   8.3e-157  523.1   2.5    1.2  1  PF00888.17 Cullin family
    1.5e-27   95.1   0.5    8.9e-27   92.6   0.2    2.3  2  PF10557.4  Cullin protein neddylation domain
     0.0042   16.7   0.4      0.046   13.3   0.0    2.6  2  PF10737.4  Spore germination protein GerPC
  ------ inclusion threshold ------
      0.032   14.2   0.0      0.081   12.9   0.0    1.6  1  PF02082.15 Transcriptional regulator
      0.079   12.7   0.5        0.2   11.4   0.1    1.9  2  PF13473.1  Cupredoxin-like domain


Domain annotation for each model (and alignments):
>> PF00888.17  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  523.1   2.5    3e-160  8.3e-157      14     584 ..      38     647 ..      22     653 .. 0.96

  Alignments for each domain:
  == domain 1    score: 523.1 bits;  conditional E-value: 3e-160
  PF00888.17  14 ksvsslsyeelYsavyni....vpeklgeklYeklkeyleeyvks.lkksllendeeellkelikeWkkfseaaklinkifryLdryyvkkn...........iwreelfeqikekliealleliekeRkgeaidreliknvveslvelgadklevYeeeFekpfleatsefYkkea...lqessvseYlkkveerleeeeervkkylhestekklievvekvLieehletl....esefqklldnekiedLrrmYrllsrvpegleelkkaleehvkkeglelvekla........eetdpkdyveellelhdklqslvseafkndaaflealdkafesfvnkn..asksaellAkYiDqllkksskkleeeeleekldeiitlfkyledkdvFekfYrklLakRLlneksasddaekkmiekLkeecgeeftsklevMlkDislskelnrkfkeelekqldkll...kkidlsvkvLstgfWptlskeksfelPeelekalerfeefYekkksgRkLtWlhslgkvelklefedktyeltvstvqaaiLllFnd....keeltveelseatklsedlltraLqsllsakvllelkseedeelednskfs 584
                   +s+++y + Y++ yn+    +p + +e+lY++ +e++++y+++ +  sl+++++e ll+el+++W +++ + k+++k+f+yLdryyvk++            ++  +f+++k ++ +a+l+li++eR+g  idr l+k++v+++ ++g+ +l  Y  +Fe+++l +t+e+Y++++   ++ ++ + Y+ k+e++l++e erv  yl++ +e kl+ vve + +e++ + l     s++++ll n+k +dL+rmYrl+ + ++ l+++++++ +h+++ g e++++ +        e +++ d+v+ell+lhdk+ ++v+e f+ +a f++al++af  fvn++  ++  a+l++ ++D +lk + +kl++e+ e  l++ + lf+yl dkd+F + Y++ LakRLln++sasdd+e+ mi+kLk +cg++ft k+e+Ml+D+ +  + +++f+ +  ++l+++    +++d+ v+vL+tg+Wpt++  + ++lP e+ k+ + f+++Y +++++R+L W++ lg++ +k + ++k+y+l+v+t qa+ +l+Fn+     e +t+e+l+e ++l+e++l+r L+sl+++k++  +k ++++ ++ +++f+
  MMETSP1325-20131115|7216_1  38   647
                 5689**************8888888899***************99899999999********************************************************************************************************************************************************************************99999999***********************************************99999******9888888********************************************************************************************************************************************************99999888877999**********************.*******************************************************************99********************************999999998888888776 PP

>> PF10557.4  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.44   1.2e+03      33      54 ..     602     623 ..     600     628 .. 0.87
   2 !   92.6   0.2   3.3e-30   8.9e-27       1      67 [.     675     740 ..     675     741 .. 0.97

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.44
   PF10557.4  33 ieqlkkrfkpsvadiKkrIesL 54 
                  eqlk+r ++   ++K+ + sL
  MMETSP1325-20131115|7216_1 602 FEQLKERLNLPEEHLKRVLHSL 623
                 589**************99998 PP

  == domain 2    score: 92.6 bits;  conditional E-value: 3.3e-30
   PF10557.4   1 veedrkleieaaIVriMKsrktlshneLvaevieqlkkrfkpsvadiKkrIesLIekeYleRdeedk 67 
                 veedr+++ieaa+VriMK+rk+lsh++L+aev +ql+  fkp+++ iK+rIe LI++eYleRd++ +
  MMETSP1325-20131115|7216_1 675 VEEDRSVAIEAAVVRIMKARKQLSHQQLLAEVLSQLA-FFKPNPKVIKRRIEALIDREYLERDPDTP 740
                 79**********************************8.*************************9876 PP

>> PF10737.4  Spore germination protein GerPC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   1.7e-05     0.046      38     171 ..      22     162 ..      17     164 .. 0.71
   2 ?   -0.1   0.0      0.22     6e+02      78     163 ..     300     383 ..     295     397 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.7e-05
   PF10737.4  38 ietLeGtLniGlnPsdlesiedfavdqettkvgkaeq....eeaeqlvqqirekveaylekelpelleeleqqy.essldes..yrqfiieDikkqldsRikyYvkqlkkeeevapaeeelaekiaekvkadieraveaFl 171
                 i++Le  Ln G+            v++ tt  ++  q    + +eql+q   e++++yl + +   l++  +++  ++l     ++q++ + ++k      +yYvk+ +    +    ++++  i+++vk+d+++a+   +
  MMETSP1325-20131115|7216_1  22 IDRLENILNEGMKKEGSMFSPKEYVQTYTTCYNMCTQkspyNWSEQLYQRHGETISRYLSDTVLPSLRDQHDEFlLRELTRRwgNHQIMNKWMQKFFMYLDRYYVKHHSLPSLLDAGLKHFKSLIFDEVKRDVANAMLDLI 162
                 6677777777776533222222334444444444444111156799999999********998888877766651556766533677788888888888889********9999999999****************98776 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.22
   PF10737.4  78 eqlvqqirekveaylekelpelleeleqqyessldesyrqfiieDikkqldsRikyYvkqlkke.eevapaeeelaekiaekvkadi 163
                 e+  q i + v++++e+   e+++  e+++e +  e++++    D  k l    + Y+k ++++ ++ a  ++ l+e  ++ v +d+
  MMETSP1325-20131115|7216_1 300 EKWLQPIADIVRKHIEHMGGEIINRREARVEGETKETNQD---PDFVKELLALHDKYIKVVNEQfQGNALFQKALKEAFVDFVNRDV 383
                 5667777778888888888888888888888887777764...23333333333334443333212233334445555555555555 PP

>> PF02082.15  Transcriptional regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     3e-05     0.081       8      50 ..     582     624 ..     576     628 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3e-05
                 HHHHHHHHHHHCSTTCC.--HHHHHHHHTS-HHHHHHHHHHHH CS
  PF02082.15   8 eyalhallyLakeeeeepvsseeiaerqnispvylekilakLr 50 
                  +a+++l++  +   +e+++ e++ er n+++++l+++l+ L+
  MMETSP1325-20131115|7216_1 582 LQAITILAFNNTGGADEHFTFEQLKERLNLPEEHLKRVLHSLS 624
                 578999999999999999**********************997 PP

>> PF13473.1  Cupredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       2.3   6.2e+03      25      53 ..     354     382 ..     352     389 .. 0.88
   2 ?   11.4   0.1   7.2e-05       0.2      43      93 ..     583     633 ..     567     643 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 2.3
   PF13473.1  25 itvkdggfePskievkagekvklkiknkd 53 
                 i+v +++f+ + +  ka +++ + ++n+d
  MMETSP1325-20131115|7216_1 354 IKVVNEQFQGNALFQKALKEAFVDFVNRD 382
                 88999999999999999999999999998 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 7.2e-05
   PF13473.1  43 ekvk.lkiknkdktpeefesedlgeekvlapgktttitiaplkpGeYeftcd 93 
                 + ++ l ++n++   e+f++e+l+e+ +l+ +  +++ ++ l+ G+Y+ + +
  MMETSP1325-20131115|7216_1 583 QAITiLAFNNTGGADEHFTFEQLKERLNLPEEHLKRV-LHSLSCGKYKVIEK 633
                 4455378***********************9999995.59*******98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (866 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.27u 0.43s 00:00:01.70 Elapsed: 00:00:00.75
# Mc/sec: 2766.99
//
Query:       MMETSP1325-20131115|7223_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 784.69
//
Query:       MMETSP1325-20131115|7225_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       631  (0.0461527); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 933.05
//
Query:       MMETSP1325-20131115|7229_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.32s 00:00:00.66 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|7230_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|7228_1  [L=335]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-11   43.8  24.0    1.7e-11   43.8  16.7    3.1  3  PF10252.4  Casein kinase substrate phosphoprotein PP28
      3e-09   36.0   1.0    6.3e-09   35.0   0.7    1.6  1  PF02037.22 SAP domain


Domain annotation for each model (and alignments):
>> PF10252.4  Casein kinase substrate phosphoprotein PP28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   2.6     0.034   2.3e+02      21      45 ..      34      59 ..       8      91 .. 0.61
   2 !   43.8  16.7   2.5e-15   1.7e-11       1      80 [.     103     189 ..     103     197 .. 0.86
   3 ?   -1.0   0.7      0.23   1.6e+03      32      61 ..     224     255 ..     195     271 .. 0.76

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.034
   PF10252.4 21 dkselsRrErEeie.kqkakerymkl 45
                + +  sR ErE+ + + +  +r++++
  MMETSP1325-20131115|7228_1 34 ADELASRDEREAENnAERQAKRKERI 59
                44445888888543123333444444 PP

  == domain 2    score: 43.8 bits;  conditional E-value: 2.5e-15
   PF10252.4   1 anPnrvkkkrsqkakeieea.......dkselsRrErEeiekqkakerymklhaeGKteearaDLaRLalireqReeaaarkeaeke 80 
                 anPn ++++r  k+k++++        +   l+R+ErE+ e+ ++k++y klhaeGKt+e + D++RL+  + +Re++ a ++a +e
  MMETSP1325-20131115|7228_1 103 ANPNDQRQERGIKIKDMAKMaaadgeaAAPRLTRKEREAQEAERKKAAYDKLHAEGKTDEYQRDMERLKAAKARREAQEAERKAAAE 189
                 69********99999944445667888999**********************************************87666655433 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.23
   PF10252.4  32 eiekqkakerymklhaeG.KteearaDL.aRL 61 
                 +++k + k+ +  l++ G  t+ +++DL aRL
  MMETSP1325-20131115|7228_1 224 DVKKYNGKQLKDALKERGlDTQGQKKDLiARL 255
                 56777778888888888844677889986787 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.7   9.2e-13   6.3e-09       3      34 ..     227     258 ..     225     259 .. 0.90

  Alignments for each domain:
  == domain 1    score: 35.0 bits;  conditional E-value: 9.2e-13
                 T--HHHHHHHHHHTT------HHHHHHHHHHH CS
  PF02037.22   3 kltVaeLKaeLkkrGLptsGkKaeLieRLkeh 34 
                 k   ++LK+ Lk+rGL+t+G K++Li+RL+ +
  MMETSP1325-20131115|7228_1 227 KYNGKQLKDALKERGLDTQGQKKDLIARLLAF 258
                 55668************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1612  (0.117905); expected 273.4 (0.02)
Passed bias filter:                      479  (0.0350351); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.99u 0.41s 00:00:01.40 Elapsed: 00:00:00.67
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|7224_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-11   41.5   0.1      2e-10   40.1   0.0    1.8  2  PF02225.17 PA domain
  ------ inclusion threshold ------
      0.027   13.9   0.1       0.07   12.5   0.0    1.7  1  PF10686.4  Protein of unknown function (DUF2493)


Domain annotation for each model (and alignments):
>> PF02225.17  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.78   5.3e+03      16      37 ..      26      47 ..      20      47 .. 0.77
   2 !   40.1   0.0   2.9e-14     2e-10       6      98 ..      76     170 ..      72     172 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.78
  PF02225.17 16 gisegsckdddlaksdvkGkIv 37
                  + + c  ++  +++++++Iv
  MMETSP1325-20131115|7224_1 26 VKTQDLCRGSTESDRTIANSIV 47
                3788889999999999999987 PP

  == domain 2    score: 40.1 bits;  conditional E-value: 2.9e-14
  PF02225.17   6 aqgplvsagygisegsckdddlaksdvkGkIvlvrrgvctfsekaevaqeaGAkgviiin..pseaalpggtkvgpsdvgiPvvvisradgeall 98 
                  +++lv a + +++++ +d  +++ dv Gk vlv+rg+c f eka+ a +  A +vii+n  +s +  + + +    +v+iP+ +++   ge ++
  MMETSP1325-20131115|7224_1  76 RKYELVNAVPANACDEESDVLDNAADVVGKAVLVQRGGCQFLEKAMKAWASNASMVIIANteTSINRYGCDPRWKGLKVDIPALMVTDRGGEVMI 170
                 567888788888999999999***************************************43333333333333334678888888877777666 PP

>> PF10686.4  Protein of unknown function (DUF2493)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     1e-05      0.07      22      58 ..      94     130 ..      84     137 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1e-05
   PF10686.4  22 aaLDkvrakvpdmvLlhggakkGaeriAarWAeqrgv 58 
                 ++LD++++ v++ vL+  g  +++e++ ++WA++  +
  MMETSP1325-20131115|7224_1  94 DVLDNAADVVGKAVLVQRGGCQFLEKAMKAWASNASM 130
                 89******************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.49
# Mc/sec: 1408.47
//
Query:       MMETSP1325-20131115|7222_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00051   19.2   0.5    0.00051   19.2   0.4    2.5  3  PF12312.3  Nepovirus subgroup A polyprotein
  ------ inclusion threshold ------
        2.8    7.0  11.5        0.4    9.8   1.2    2.2  2  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF12312.3  Nepovirus subgroup A polyprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.4   7.4e-08   0.00051     197     235 ..      49      85 ..      42      93 .. 0.76
   2 ?   -2.3   0.0      0.27   1.8e+03     188     214 ..     121     148 ..     117     157 .. 0.62
   3 ?   -2.1   2.5      0.24   1.7e+03     199     209 ..     164     174 ..     150     182 .. 0.64

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 7.4e-08
   PF12312.3 197 Ggpalpppppppliqkppsfeerlreacrrkvcarafal 235
                 G pa   ppppp++qkp sf er  +    +++a  + +
  MMETSP1325-20131115|7222_1  49 GNPAT--PPPPPPMQKPASFIERASSWRGDRSSASSMPV 85 
                 66666..5666669*********9988877777766655 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.27
   PF12312.3 188 derlleahp.Ggpalpppppppliqkpp 214
                 d+r++  +  G ++ p  pp  ++ kp 
  MMETSP1325-20131115|7222_1 121 DDRMSYDFAtGESSGPGFPPSSTVAKPS 148
                 6666655541555556667777788875 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.24
   PF12312.3 199 palpppppppl 209
                 + +  ppppp+
  MMETSP1325-20131115|7222_1 164 TGMVAPPPPPP 174
                 44434444443 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.2   5.8e-05       0.4     193     232 ..      50      89 ..       9      95 .. 0.67
   2 ?    2.5   1.8      0.01        70     161     197 ..     132     174 ..     114     182 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 5.8e-05
   PF05308.6 193 ppPpPlpavslqqsasaielikerkekksaeektlvssks 232
                  p  P+p++++q++as+ie +   ++ +s++    v+s+s
  MMETSP1325-20131115|7222_1  50 NPATPPPPPPMQKPASFIERASSWRGDRSSASSMPVESTS 89 
                 2233333335899999999999999988888888877765 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.01
   PF05308.6 161 esvslslkssstasvvisdpteepelevp......pppppPpP 197
                 es++ + ++sst + ++    e  e + +        pppPpP
  MMETSP1325-20131115|7222_1 132 ESSGPGFPPSSTVAKPSGSTRESVEFDLSagdtgmVAPPPPPP 174
                 4455556666655555444444444444477777754555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1036.68
//
Query:       MMETSP1325-20131115|7231_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-16   60.7   0.3    2.3e-16   60.4   0.2    1.1  1  PF08613.6  Cyclin
  ------ inclusion threshold ------
      0.052   13.0   0.0       0.07   12.5   0.0    1.2  1  PF00134.18 Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> PF08613.6  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.2   3.4e-20   2.3e-16     100     149 .]       1      50 [.       1      50 [. 0.98

  Alignments for each domain:
  == domain 1    score: 60.4 bits;  conditional E-value: 3.4e-20
                 HHHHHHHHHHH----SS---HHHHHH-----HHHHHHHHHHHHHHTTT-- CS
   PF08613.6 100 RLllvallvatKflvDlsysnekfakvggislkeLnkLEidFlflvdFdl 149
                 R +++ ++ a+Kf++D  ++n+++akvgg+++ eLn+LE+dFlf v+F+l
  MMETSP1325-20131115|7231_1   1 RVIITSVMLAAKFFDDQYFNNAYYAKVGGVPCVELNQLEVDFLFRVNFSL 50 
                 889*********************************************87 PP

>> PF00134.18  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     1e-05      0.07      76     126 ..       2      50 ..       1      51 [. 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1e-05
                 ---HHHHHHHCCC-SS---CHHHHCHTTSSS-CCHHHHHHHHHHHHCTT-- CS
  PF00134.18  76 vgvtcLllAaKveeirppeledlvyitdgaytkeeilqmErliLstLnfdl 126
                 v +t+++lAaK+ +++    ++  y++ g +   e++q+E ++L  +nf l
  MMETSP1325-20131115|7231_1   2 VIITSVMLAAKFFDDQY--FNNAYYAKVGGVPCVELNQLEVDFLFRVNFSL 50 
                 899************64..555555555889999***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 550.65
//
Query:       MMETSP1325-20131115|7233_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 281.11
//
Query:       MMETSP1325-20131115|7235_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-08   33.7  10.8    3.3e-08   33.4   7.5    1.1  1  PF07019.7 Rab5-interacting protein (Rab5ip)


Domain annotation for each model (and alignments):
>> PF07019.7  Rab5-interacting protein (Rab5ip)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   7.5   2.4e-12   3.3e-08      12      81 .]       3      76 ..       1      76 [. 0.84

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 2.4e-12
   PF07019.7 12 lllGviaGilgLegflGflfyflislllsllyyakvqkideeyf.kgrtelltegllaglat...FlltWtlfY 81
                ++ G+ aG+lgL+g++G l+y++i++l+sll++a ++ + + y+ +++ ++ ++g ++g      F+l+Wtl+Y
  MMETSP1325-20131115|7235_1  3 IIGGCCAGVLGLTGLAGALLYIFIYTLISLLLLATMGFNAKGYMnVSAFKFCIDGGFGGGKYglsFVLFWTLSY 76
                789*******************************8887777766257888888777766544477********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       675  (0.049371); expected 273.4 (0.02)
Passed bias filter:                      406  (0.0296957); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|7236_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   14.8   0.1      0.013   14.8   0.0    1.1  1  PF00781.19 Diacylglycerol kinase catalytic domain
      0.032   14.0   0.1      0.037   13.8   0.0    1.1  1  PF03868.10 Ribosomal protein L6, N-terminal domain
      0.042   13.5   0.1      0.042   13.5   0.0    1.1  1  PF06366.8  Flagellar protein FlhE


Domain annotation for each model (and alignments):
>> PF00781.19  Diacylglycerol kinase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   2.8e-06     0.013      31      72 ..      12      54 ..       1      59 [. 0.63

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 2.8e-06
  PF00781.19 31 levvetee.ageaealei.aaalkdaddlivvvGGDGtvnevln 72
                + ++  ++ ++ +  +++ ++++ +   ++ vvGG Gt +e+++
  MMETSP1325-20131115|7236_1 12 VALYARRNtKATEAYIRVsCERVTTT-RCVAVVGGEGTHHELAS 54
                44444444233333344456666666.8*************986 PP

>> PF03868.10  Ribosomal protein L6, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   8.1e-06     0.037      27      44 ..       7      25 ..       4      39 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 8.1e-06
  PF03868.10 27 amYhrraLYkrk.akagkt 44
                ++Yhr aLY+r+ +ka++ 
  MMETSP1325-20131115|7236_1  7 HQYHRVALYARRnTKATEA 25
                79*********95565554 PP

>> PF06366.8  Flagellar protein FlhE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   9.3e-06     0.042      50      76 ..      33      59 ..       3      60 .] 0.78

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 9.3e-06
   PF06366.8 50 LCsqtRCveLeggsGktrafaglaaee 76
                  ++tRCv++ gg+G+ + +a + aee
  MMETSP1325-20131115|7236_1 33 RVTTTRCVAVVGGEGTHHELASDRAEE 59
                34678****************999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|7237_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   13.6   0.0      0.038   13.4   0.0    1.0  1  PF07291.6 Methylamine utilisation protein MauE


Domain annotation for each model (and alignments):
>> PF07291.6  Methylamine utilisation protein MauE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.8e-06     0.038     100     140 ..      13      53 ..       3      57 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.8e-06
   PF07291.6 100 rtqidCGCvrnglkqriswllvlrnlaLaalalavaavlle 140
                  t+i  GC r + ++r+  + + r+   +++a+ v +v+++
  MMETSP1325-20131115|7237_1  13 LTHIRGGCTRSPYHSRLLTVDIGRARPTSTAAVVVVVVVVA 53 
                 49***********************9988888888777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|7238_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-06   26.0   0.0      3e-05   23.9   0.0    2.2  2  PF13499.1  EF-hand domain pair
    1.9e-05   24.0   0.0     0.0051   16.4   0.0    2.9  2  PF13405.1  EF-hand domain
    0.00014   21.2   1.7     0.0051   16.2   0.1    2.7  3  PF13833.1  EF-hand domain pair
    0.00023   20.1   4.3       0.01   14.9   0.1    3.6  4  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   8.9e-09     3e-05       5      63 ..      37      91 ..      19      94 .. 0.92
   2 ?   -2.5   0.0       1.5   5.2e+03      36      52 ..     114     130 ..     102     130 .. 0.73

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 8.9e-09
   PF13499.1  5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63
                +++++D+++++ ++  e ++ l  +      + + e +++if+  D ng Gvl+++E +
  MMETSP1325-20131115|7238_1 37 LWDRFDTNRTKLVNALEVMAGLAVMC----VGPILEKIQFIFDLHDFNGQGVLTYDEVV 91
                4899**********************....***************************86 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.5
   PF13499.1  36 eevrevldyifkelDkn 52 
                 +++++++d+ f  +D +
  MMETSP1325-20131115|7238_1 114 SMMERFADEAFVIADVD 130
                 56677888888877765 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.013        45       6      26 ..      38      58 ..      37      64 .. 0.87
   2 !   16.4   0.0   1.5e-06    0.0051       2      26 ..      70      94 ..      69      99 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.013
                -GCC-------B---HHHHHH CS
   PF13405.1  6 FklfDkdgdGkidaeELrdaL 26
                ++ fD++++  ++a E+++ L
  MMETSP1325-20131115|7238_1 38 WDRFDTNRTKLVNALEVMAGL 58
                578*************99877 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 1.5e-06
                HH---GCC-------B---HHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaL 26
                ++ +F+l+D++g G ++ +E++ a+
  MMETSP1325-20131115|7238_1 70 IQFIFDLHDFNGQGVLTYDEVVVAI 94
                7889****************98765 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.012        40       5      38 ..      14      45 ..      13      59 .. 0.82
   2 !   16.2   0.1   1.5e-06    0.0051      25      50 ..      68      93 ..      46      96 .. 0.89
   3 ?   -3.0   0.0       1.6   5.3e+03      41      52 ..     159     170 ..     159     172 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.012
   PF13833.1  5 ItreeLkral.allglkglseeevdilf.refDtdg 38
                ++++++k+ +  +l    +++ e+  l+ + fDt++
  MMETSP1325-20131115|7238_1 14 MDKATFKEFIaEAL----PNAAECASLLwDRFDTNR 45
                68999999998888....*****6665526899886 PP

  == domain 2    score: 16.2 bits;  conditional E-value: 1.5e-06
   PF13833.1 25 eevdilfrefDtdgdGkisfeEFcvl 50
                e+++ +f+++D++g G ++++E +v+
  MMETSP1325-20131115|7238_1 68 EKIQFIFDLHDFNGQGVLTYDEVVVA 93
                78********************9875 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 1.6
   PF13833.1  41 kisfeEFcvlle 52 
                 k+++ EF++++e
  MMETSP1325-20131115|7238_1 159 KVGLREFLKRFE 170
                 578889998887 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.2   4.2e+03      18      23 ..      18      23 ..      16      24 .. 0.70
   2 !    4.2   0.0    0.0081        28       5      27 ..      37      59 ..      35      61 .. 0.86
   3 !   14.9   0.1     3e-06      0.01       2      25 ..      70      93 ..      69      95 .. 0.90
   4 ?   -0.3   0.3      0.22   7.6e+02       2      12 ..     120     130 ..     119     130 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.2
                EHHHHH CS
  PF00036.27 18 sfeEfk 23
                +f+Ef+
  MMETSP1325-20131115|7238_1 18 TFKEFI 23
                678885 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0081
                HHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  5 aFkefDkDgdGkIsfeEfkealk 27
                +++ fD++++  ++  E ++ l+
  MMETSP1325-20131115|7238_1 37 LWDRFDTNRTKLVNALEVMAGLA 59
                5899******9999999988775 PP

  == domain 3    score: 14.9 bits;  conditional E-value: 3e-06
                HHHHHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkea 25
                ++ +F++ D +g G ++++E + a
  MMETSP1325-20131115|7238_1 70 IQFIFDLHDFNGQGVLTYDEVVVA 93
                789*****************9865 PP

  == domain 4    score: -0.3 bits;  conditional E-value: 0.22
                 HHHHHHHHCTT CS
  PF00036.27   2 lkeaFkefDkD 12 
                 ++eaF ++D+D
  MMETSP1325-20131115|7238_1 120 ADEAFVIADVD 130
                 589******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1012.34
//
Query:       MMETSP1325-20131115|7239_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.5   3.6      0.015   15.5   2.5    3.0  2  PF00428.14 60s Acidic ribosomal protein
       0.29   10.0  15.9      0.073   11.9   1.9    2.1  2  PF01516.11 Orbivirus helicase VP6


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   2.5   2.2e-06     0.015      44      82 ..      52      90 ..      29      97 .. 0.62
   2 ?   -9.7  12.6         2   1.4e+04      41      80 ..     110     148 ..     103     203 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2.2e-06
  PF00428.14 44 aklaaaaaaaaaaaaaaaaaaaaeeekkeeeeeEeeddd 82
                ak +a+   +   a+a+++aa a++ek+eee eE  dd 
  MMETSP1325-20131115|7239_1 52 AKSVAVTDMSKVVATADEQAADAKAEKEEEEREEGMDDF 90
                332366666666777777777777777777765555654 PP

  == domain 2    score: -9.7 bits;  conditional E-value: 2
  PF00428.14  41 ngsaklaaaaaaaaaaaaaaaaaaaaeeekkeeeeeEeed 80 
                 n++ak+aa + a+ +aa++ aa +  +   +++    e d
  MMETSP1325-20131115|7239_1 110 NATAKAAADSTAPSTAATPTAAMPSSAVDSEKPYG-AEAD 148
                 56666432223333333333333322222222222.2344 PP

>> PF01516.11  Orbivirus helicase VP6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.9   1.1e-05     0.073      29      84 ..      73     128 ..      60     161 .. 0.80
   2 ?    1.7   5.6     0.014        94      98     131 ..     177     209 ..     136     211 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.1e-05
  PF01516.11  29 eseeekeeepkeedeaeerlsdGeGeqkkkGkkeesdketkdadvdrrlatevGsg 84 
                 + + ekeee +ee+  +  + dG G++++ G  e s+  t +a  d    ++  + 
  MMETSP1325-20131115|7239_1  73 DAKAEKEEEEREEGMDDFMIYDGAGSDDDWGVVEPSSNATAKAAADSTAPSTAATP 128
                 56889*********************************999999998765554443 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.014
  PF01516.11  98 adrGdgkvrGGgGdadkgagatGtegGgvvvlte 131
                  d Gd    G gG +   a+at +++Gg++ l +
  MMETSP1325-20131115|7239_1 177 GD-GDDAGAGAGGFSGSNATATAADKGGWMSLNQ 209
                 23.555566788999999***********99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       645  (0.0471767); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.41s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1020.85
//
Query:       MMETSP1325-20131115|7240_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0036   16.6   0.0     0.0038   16.5   0.0    1.1  1  PF00685.22 Sulfotransferase domain


Domain annotation for each model (and alignments):
>> PF00685.22  Sulfotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.8e-07    0.0038     152     197 ..      22      74 ..       5     112 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.8e-07
                 H-HHHHHHHHHHTCCCCCEEEEEHHHHHH-HHHHHHHHHHHTT--.......H CS
  PF00685.22 152 gsyfdhveewlklrkkgnvlflrYEdlkkdpakeikeiaeFlGip.......l 197
                 + y+ ++ ++l ++  ++++++rYE +  d  + +k++a+ lG++       +
  MMETSP1325-20131115|7240_1  22 SLYSLQLNQFLNYFSSEQIAIVRYEAYSGDGPQLLKNLASWLGLTfrrdgmtA 74 
                 34778999************************************966555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 640.66
//
Query:       MMETSP1325-20131115|7241_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        8.4    4.8  11.4        9.6    4.6   7.9    1.1  1  PF10446.4  Protein of unknown function (DUF2457)


Domain annotation for each model (and alignments):
>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   7.9    0.0007       9.6      47      83 ..      36      72 ..      27      82 .. 0.49

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0007
   PF10446.4 47 eealeeedededdeeddddeDeddddddddeDdedde 83
                e a++++   + d++ d d D+d dd+d d+Dd+dd 
  MMETSP1325-20131115|7241_1 36 EXAIDDDGAGDGDGDGDGDGDGDGDDGDGDDDDDDDG 72
                4455555333333333333333333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 448.68
//
Query:       MMETSP1325-20131115|7243_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 301.94
//
Query:       MMETSP1325-20131115|7242_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.7e-11   41.3   0.0    7.9e-11   41.1   0.0    1.0  1  PF08324.6 PUL domain
  ------ inclusion threshold ------
       0.13   11.4   0.0       0.16   11.1   0.0    1.1  1  PF14399.1 A predicted NlpC/p60-like peptidase


Domain annotation for each model (and alignments):
>> PF08324.6  PUL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   1.1e-14   7.9e-11       4     100 ..      48     146 ..      45     151 .. 0.90

  Alignments for each domain:
  == domain 1    score: 41.1 bits;  conditional E-value: 1.1e-14
                 -----------.-HHHHH---HHHHHH...H--S-HHHHHH----TT-TTT-.......HHHHHHHHHHHHHH-..S--HHHHHHHHHHGGG-S-.... CS
   PF08324.6   4 Pvkqvllfkta.nlekllkKlkelNsklnkelkLsdeelnaiesllkelkssssaea.llealttallkilksWpeeerfpvlDllRilvakppaaall 100
                 ++++++ f++a  +ek+++K +el   l+ +l++s  e   +++l+  l+++   +a  l+     llk l sWp++++fpvlDl+R+ +a+p  a+ l
  MMETSP1325-20131115|7242_1  48 THSTFYKFESAsAVEKIKAKVEELSAALDGDLAMSGGEPVVLSNLCTTLSQTHRWHAsSLTYEEFRLLKRLLSWPTTSIFPVLDLMRLVAAHPDGASKL 146
                 68899999666268***********999************************99999888888889***************************998766 PP

>> PF14399.1  A predicted NlpC/p60-like peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.4e-05      0.16     154     232 ..      31     107 ..      21     120 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.4e-05
   PF14399.1 154 pledlakarnskgpplspkntwytlkkppaendlkeair...kairknaermlnppigfiglkgirkfakelerweklddea 232
                  ++  a++ +s++++ ++++t+y++++ +a +++k  ++   +a+     +   +p   + l+++++++ + +rw  ++++ 
  MMETSP1325-20131115|7242_1  31 AMDTSAASSSSSSSAAPTHSTFYKFESASAVEKIKAKVEelsAALDGDLAMSGGEP---VVLSNLCTTLSQTHRW--HASSL 107
                 55666667777777*************99999866555544499999999999999...****************..44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       576  (0.0421299); expected 273.4 (0.02)
Passed bias filter:                      430  (0.0314511); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 714.21
//
Query:       MMETSP1325-20131115|7244_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-09   36.5   0.0      7e-09   36.0   0.0    1.2  1  PF13419.1 Haloacid dehalogenase-like hydrolase
     0.0081   15.7   0.0      0.013   15.0   0.0    1.3  1  PF13242.1 HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> PF13419.1  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0     1e-12     7e-09     100     172 ..       1      74 [.       1      77 [. 0.94

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 1e-12
   PF13419.1 100 Sngsaeavellleklgledlfdavftsddvga.rKPdpeayekvlerlgvkpeeilfidDsledveaAraaGir 172
                 S++s++a++ll+ ++  +dl   +   +d  + +K  +e+y  + ++lg++p+e++f++Ds  ++eaA aaG+ 
  MMETSP1325-20131115|7244_1   1 SSASVNAQKLLFGHSAEGDLTGLISHHFDKLTgSKKKSESYGDICKQLGIRPSELVFVSDSEVELEAAAAAGCC 74 
                 899*********************9999877768**************************************85 PP

>> PF13242.1  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.9e-06     0.013       4      58 ..      35      89 ..      32     100 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.9e-06
                --STHHHHHHH----GGTTTEEEE---.HHHHHHHHH---.EE----------TT- CS
   PF13242.1  4 KPnpgmydkalevlgappsevvmiGDslatDieaAnaaGi.rsilVltGvsreedl 58
                K   ++y  + ++lg++pse v + Ds +  +eaA aaG+   + V+ G+++  d+
  MMETSP1325-20131115|7244_1 35 KKKSESYGDICKQLGIRPSELVFVSDS-EVELEAAAAAGCcAVASVRPGNAQLSDA 89
                66677888888999*************.***********73556688888777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 563.59
//
Query:       MMETSP1325-20131115|7245_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 699.74
//
Query:       MMETSP1325-20131115|7246_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00016   21.2   6.9    0.00016   21.2   4.8    2.3  2  PF12329.3  TATA element modulatory factor 1 DNA binding
    0.00026   20.9   3.2    0.00026   20.9   2.2    2.0  2  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
    0.00038   20.2   6.3      0.015   15.1   1.7    2.0  2  PF11559.3  Afadin- and alpha -actinin-Binding
    0.00066   19.6   5.3    0.00068   19.5   1.9    1.9  2  PF14389.1  Leucine-zipper of ternary complex factor MIP1
     0.0025   18.0   9.7      0.014   15.6   3.0    2.1  2  PF04102.7  SlyX
     0.0071   16.2   0.1      0.011   15.6   0.1    1.4  1  PF05440.7  Tetrahydromethanopterin S-methyltransferase subunit B
     0.0084   15.7   3.5     0.0084   15.7   2.4    2.1  2  PF12325.3  TATA element modulatory factor 1 TATA binding
      0.009   15.5  11.1      0.019   14.4   7.7    1.5  1  PF00769.14 Ezrin/radixin/moesin family
  ------ inclusion threshold ------
      0.011   14.8   4.3      0.013   14.7   3.0    1.0  1  PF12795.2  Mechanosensitive ion channel porin domain
       0.02   15.1   1.0        0.1   12.8   0.1    2.1  2  PF02895.9  Signal transducing histidine kinase, homodimeric domain
      0.024   14.2   3.6      0.051   13.1   2.5    1.6  1  PF01105.19 emp24/gp25L/p24 family/GOLD
      0.026   14.6   2.7       0.11   12.6   0.3    2.0  2  PF09537.5  Domain of unknown function (DUF2383)
      0.028   13.0   1.6       0.24   10.0   0.2    2.0  2  PF13729.1  F plasmid transfer operon, TraF, protein
      0.036   12.4   3.8      0.041   12.2   2.6    1.0  1  PF13166.1  AAA domain
      0.042   12.6   1.8      0.048   12.4   1.2    1.1  1  PF14362.1  Domain of unknown function (DUF4407)
      0.047   13.8   1.2      0.083   13.0   0.2    1.7  2  PF13675.1  Type IV pili methyl-accepting chemotaxis transducer N-term
      0.055   13.5   5.8      0.071   13.1   0.2    2.8  3  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
      0.062   13.1   1.0      0.062   13.1   0.7    2.0  2  PF14282.1  FlxA-like protein
      0.062   13.0   8.5      0.061   13.0   2.5    2.0  2  PF07321.7  Type III secretion protein YscO
      0.071   12.5  12.2      0.087   12.2   6.5    1.8  1  PF04156.9  IncA protein
      0.086   12.9   2.1       0.21   11.7   0.6    2.1  2  PF05531.7  Nucleopolyhedrovirus P10 protein
      0.089   12.4   1.1       0.52    9.9   0.0    2.6  2  PF09006.6  Lung surfactant protein D coiled-coil trimerisation
      0.092   12.4   6.6       0.41   10.3   0.4    2.6  3  PF05524.8  PEP-utilising enzyme, N-terminal
      0.098   12.7   4.3       0.26   11.3   3.0    1.8  1  PF10279.4  Latarcin precursor
       0.11   12.1  14.6       0.18   11.5   0.8    3.0  3  PF01920.15 Prefoldin subunit
       0.13   12.5   4.8        0.4   10.9   2.9    1.9  2  PF09177.6  Syntaxin 6, N-terminal
       0.13   10.6   8.0      0.047   12.1   1.7    1.9  2  PF03148.9  Tektin family
       0.15   11.5   0.8       0.41   10.1   0.5    1.8  1  PF02954.14 Bacterial regulatory protein, Fis family
       0.17   12.1   9.4      0.082   13.1   2.1    2.0  2  PF06156.8  Protein of unknown function (DUF972)
       0.19   11.7   4.3      0.075   13.0   1.3    1.6  1  PF13339.1  Apoptosis antagonizing transcription factor
       0.23   11.3   3.1          1    9.3   0.6    2.6  2  PF06013.7  Proteins of 100 residues with WXG
       0.24   11.1   2.7       0.18   11.5   0.5    1.9  1  PF12806.2  Acetyl-CoA dehydrogenase C-terminal like
       0.28    9.3   3.8       0.31    9.1   2.7    1.0  1  PF01499.11 Herpesvirus UL25 family
        0.3   10.7   9.9       0.08   12.6   2.6    2.1  2  PF10211.4  Axonemal dynein light chain
       0.33   10.1  11.0       0.77    8.9   7.6    1.6  1  PF04012.7  PspA/IM30 family
       0.34   11.0   5.8      0.084   13.0   1.1    1.9  2  PF08232.7  Striatin family
       0.42   10.2   1.6        7.1    6.3   0.0    2.5  2  PF08653.5  DASH complex subunit Dam1
       0.47   10.3   4.2       0.36   10.7   0.9    2.0  2  PF09849.4  Uncharacterized protein conserved in bacteria (DUF2076)
       0.47    9.6   6.1       0.17   11.1   2.5    1.4  1  PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
       0.48   10.4   8.5       0.52   10.3   3.2    2.5  2  PF13747.1  Domain of unknown function (DUF4164)
       0.55    8.9   6.3       0.16   10.6   1.2    1.8  2  PF02181.18 Formin Homology 2 Domain
       0.56    9.8   7.8        5.3    6.7   1.8    2.4  2  PF10805.3  Protein of unknown function (DUF2730)
       0.65    9.7   6.5       0.59    9.8   1.7    2.5  3  PF05121.7  Gas vesicle protein K
       0.69    9.3  11.0       0.16   11.3   1.9    2.7  3  PF04977.10 Septum formation initiator
       0.73    9.7  12.9        2.3    8.1   9.0    1.8  1  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
       0.81    9.3   6.3       0.14   11.7   0.8    2.0  2  PF10552.4  ORF6C domain
       0.96    7.7   9.0       0.14   10.5   1.4    2.0  2  PF11853.3  Protein of unknown function (DUF3373)
       0.97    8.9   6.5       0.63    9.5   2.1    2.0  2  PF05064.8  Nsp1-like C-terminal region
        1.1    6.9   5.0        1.2    6.7   3.4    1.1  1  PF01496.14 V-type ATPase 116kDa subunit family
        1.1    9.2  11.6        1.2    9.1   0.5    3.3  3  PF10458.4  Valyl tRNA synthetase tRNA binding arm
        1.2    9.1   9.9        4.6    7.2   6.8    1.9  1  PF09304.5  Cortexillin I, coiled coil
        1.5    8.0   6.7       0.39    9.9   2.2    1.6  2  PF11180.3  Protein of unknown function (DUF2968)
        1.6    8.2   8.9          1    8.8   2.0    2.8  2  PF02996.12 Prefoldin subunit
        1.7    8.6  10.1        4.2    7.3   2.8    2.2  2  PF05103.8  DivIVA protein
        2.3    8.2   7.9        0.7    9.8   1.6    2.3  2  PF12709.2  Central kinetochore-associated
        2.5    7.7   6.1        0.7    9.5   1.7    1.8  2  PF07889.7  Protein of unknown function (DUF1664)
        2.5    7.4  11.7       0.44    9.9   2.9    2.0  2  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
        2.5    7.8   5.4         16    5.2   0.1    2.6  2  PF08700.6  Vps51/Vps67
        3.4    7.3   9.2       0.38   10.3   1.8    2.0  2  PF04859.7  Plant protein of unknown function (DUF641)
        3.6    6.2  13.4        0.3    9.8   4.0    1.9  2  PF04111.7  Autophagy protein Apg6
        3.7    6.5  12.5       0.59    9.1   2.9    2.0  1  PF13851.1  Growth-arrest specific micro-tubule binding
        3.9    7.2   9.0        6.2    6.6   6.2    1.3  1  PF03938.9  Outer membrane protein (OmpH-like)
          4    6.8   9.4        2.1    7.7   2.5    2.2  2  PF01025.14 GrpE
        4.2    7.2   8.6       0.93    9.3   2.2    2.3  3  PF10779.4  Haemolysin XhlA
        4.2    7.1  10.2         18    5.1   7.1    1.8  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein
        4.5    6.9  12.0         91    2.6   8.3    2.2  1  PF07926.7  TPR/MLP1/MLP2-like protein
        4.7    6.7  12.3         60    3.1   8.5    2.0  1  PF03962.10 Mnd1 family
        5.4    6.9  12.5       0.96    9.3   5.0    2.0  2  PF00992.15 Troponin
        5.9    6.4  11.7         15    5.2   0.3    2.5  2  PF08286.6  Spc24 subunit of Ndc80
        5.9    5.0   8.1         10    4.3   5.4    1.5  1  PF03961.8  Protein of unknown function (DUF342)
        6.3    6.0   7.0        9.7    5.4   0.9    2.2  2  PF05791.6  Bacillus haemolytic enterotoxin (HBL)
        6.6    7.1   9.7        2.2    8.6   2.7    2.5  2  PF13600.1  N-terminal domain of unknown function (DUF4140)
        7.8    5.2   7.0         19    3.9   4.9    1.6  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        8.3    6.3   9.7        8.8    6.2   2.1    2.9  2  PF00170.16 bZIP transcription factor
        9.6    6.3  10.3         53    3.9   7.2    1.9  1  PF01519.11 Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.8      0.23        43      20      44 ..       5      29 ..       1      44 [. 0.55
   2 !   21.2   4.8   8.9e-07   0.00016      23      72 ..      50      99 ..      49     101 .. 0.95

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.23
   PF12329.3 20 EgekLskkelkhnntikkLrkknke 44
                E+ +   +e+++++++ k + kn+ 
  MMETSP1325-20131115|7246_1  5 EIAEHKETEDRLKEQLQKFKHKNQG 29
                3333445555555555555555555 PP

  == domain 2    score: 21.2 bits;  conditional E-value: 8.9e-07
   PF12329.3 23 kLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerlkr 72
                k +++e++++++i  L + +kele ++e+l++ le  e+e ++le+ l +
  MMETSP1325-20131115|7246_1 50 KTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAK 99
                7899*****************************************99875 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.5      0.89   1.6e+02      46      70 ..       2      26 ..       1      30 [. 0.81
   2 !   20.9   2.2   1.4e-06   0.00026       3      77 ..      38     110 ..      36     111 .] 0.90

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.89
   PF13094.1 46 LqeeirreeaelekdeekleeLekn 70
                L  ei++  ++  + +e+l++++++
  MMETSP1325-20131115|7246_1  2 LSVEIAEHKETEDRLKEQLQKFKHK 26
                6678888888889999999999987 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 1.4e-06
   PF13094.1   3 lqrLdklpfPpqtkessfdyeqllqekralerqlaaelksielLqeeirreeaelekdeekleeLeknakalere 77 
                 + + +klp+ p++   +++ ++l+q+ + le  +   + ++e+Lq+ ++ ee e ++ e+ l +++ + ++l+ e
  MMETSP1325-20131115|7246_1  38 KMKIPKLPIGPAK--TESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDDE 110
                 5567788887777..79999**********************************************999999876 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1     0.019       3.5      65     103 ..       3      41 ..       1      46 [. 0.80
   2 !   15.1   1.7     8e-05     0.015      55     105 ..      56     106 ..      48     110 .. 0.57

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.019
   PF11559.3  65 eaeierlqskierlktqleqlerelallqekerqlekkl 103
                 + ei+  + + +rlk+ql++++ +++++  k + l+ k+
  MMETSP1325-20131115|7246_1   3 SVEIAEHKETEDRLKEQLQKFKHKNQGSMLKGAMLKMKI 41 
                 568888899999999999999999998877777777666 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 8e-05
   PF11559.3  55 esleetlrkleaeierlqskierlktqleqlerelallqekerqlekklkt 105
                  +l++++ +lea  + l+ ++e l+ +le  e+e a l+ + ++++ k+++
  MMETSP1325-20131115|7246_1  56 DALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEK 106
                 455556666666666666666666666666666666666666555555555 PP

>> PF14389.1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   1.9   3.7e-06   0.00068      19      84 ..      15      83 ..      10      87 .. 0.85
   2 !    9.9   0.3    0.0038       0.7      12      47 ..      71     106 ..      71     110 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 3.7e-06
   PF14389.1 19 kLqkqLqdeekvr..eaLekalgrssss.llelpsslpkkakellkeiavlEaevskLEqqllsLyrkl 84
                +L++qLq+ +  +  ++L+ a+ + + + l+  p+++ ++  +l + i++lEa+v++LE  +++L+ +l
  MMETSP1325-20131115|7246_1 15 RLKEQLQKFKHKNqgSMLKGAMLKMKIPkLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSL 83
                799999986555422799999999888846669********************************9887 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0038
   PF14389.1  12 aLeqeVkkLqkqLqdeekvreaLekalgrsssslle 47 
                 +Le  V+ Lq  L+ ee+ ++ Le+al + ++ + +
  MMETSP1325-20131115|7246_1  71 ELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEK 106
                 69999**********************998776655 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.2     0.079        14      23      49 ..       2      28 ..       1      40 [. 0.82
   2 !   15.6   3.0   7.5e-05     0.014       2      53 ..      58     109 ..      57     111 .] 0.95

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.079
   PF04102.7 23 LNevvaeqqkeidrlqrqlrllaerlk 49
                L+ ++ae++++ drl++ql+  + + +
  MMETSP1325-20131115|7246_1  2 LSVEIAEHKETEDRLKEQLQKFKHKNQ 28
                788899999999999999998887755 PP

  == domain 2    score: 15.6 bits;  conditional E-value: 7.5e-05
   PF04102.7   2 leerieeLEiklafqedtieeLNevvaeqqkeidrlqrqlrllaerlkelee 53 
                 l ++ie LE  +   e t+e+L   +   + e +rl++ l+ ++ ++++l++
  MMETSP1325-20131115|7246_1  58 LTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDD 109
                 789*********************************************9984 PP

>> PF05440.7  Tetrahydromethanopterin S-methyltransferase subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1     6e-05     0.011      21      58 ..      51      88 ..      43     108 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 6e-05
   PF05440.7 21 aeeledvilldvepieekvekLealvddllnsldPskp 58
                +e  ed ++ ++e +e  v++Le +v+dl  sl+ +++
  MMETSP1325-20131115|7246_1 51 TESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEET 88
                67889****************************87655 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2         1   1.8e+02      65      86 ..       7      28 ..       2      35 .. 0.63
   2 !   15.7   2.4   4.6e-05    0.0084       8      67 ..      51     110 ..      47     111 .] 0.92

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 1
   PF12325.3 65 kekkkeleelekeleeleqrye 86
                 e k++ ++l+++l++ +++ +
  MMETSP1325-20131115|7246_1  7 AEHKETEDRLKEQLQKFKHKNQ 28
                4555555666666666666655 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 4.6e-05
   PF12325.3   8 stssagpnvqlveklsstirrlEgElaslkeelarLekerdeareEivklteeneelkek 67 
                 ++s++ + +q +e+l+++++ lEg +  l+++l+  e+e+ ++++ + k+  ++e+l ++
  MMETSP1325-20131115|7246_1  51 TESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDDE 110
                 567888999*********************************************999765 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   7.7   0.00011     0.019      27     121 ..       5     106 ..       3     111 .] 0.77

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 0.00011
  PF00769.14  27 eleeseekaeeleeklkqeeeeaqklekkakeleeekerLeeeaaksekekeeLekevdeaea.......evakleeerekkeaeteqlqkelreareaeee 121
                 e++e +e+ ++l+e+l++ ++++q +  k + l+++  +L    ak+e + + L ++++ +ea        v+ l+ + e  e+e+++l++ l+++r + e+
  MMETSP1325-20131115|7246_1   5 EIAEHKETEDRLKEQLQKFKHKNQGSMLKGAMLKMKIPKLPIGPAKTESNEDALTQQIETLEAavkelegTVEDLQSSLEIEETEKARLEDALAKMRGKMEK 106
                 5678999********************************988888887777777666665555000000055666777788999999999999999988776 PP

>> PF12795.2  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   3.0     7e-05     0.013      32     132 ..       5     107 ..       2     111 .] 0.92

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7e-05
   PF12795.2  32 eikkskqkadqyqkiiddapkelrelrqelealksa..eeavkqelanlslsqLeqelaqtssqLqelqeqlqqensqlielqtrperaqqqlsearrrlqei 132
                 ei+++k+  d ++++++++  + +    + + lk +  + ++ +  ++   + L+q++ + +++  el+ +  + +s l   +t   r+ ++l+++r +++++
  MMETSP1325-20131115|7246_1   5 EIAEHKETEDRLKEQLQKFKHKNQGSMLKGAMLKMKipKLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKL 107
                 7899999999*********999999888888888888899********************************************************9998876 PP

>> PF02895.9  Signal transducing histidine kinase, homodimeric domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   0.00057       0.1      25      64 ..      13      82 ..      11      84 .. 0.91
   2 ?    0.6   0.0       3.6   6.6e+02      24      38 ..      89     102 ..      83     110 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 0.00057
   PF02895.9 25 karleqlldelr..............................eeglkasdeelkealqqlerisreLqea 64
                + rl+++l++++                              e  l ++ e l++a+ +le  +++Lq++
  MMETSP1325-20131115|7246_1 13 EDRLKEQLQKFKhknqgsmlkgamlkmkipklpigpaktesnEDALTQQIETLEAAVKELEGTVEDLQSS 82
                579999999999999999999999999999999*999998888888889999****************86 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 3.6
   PF02895.9  24 tkarleqlldelree 38 
                 +karle  l ++r  
  MMETSP1325-20131115|7246_1  89 EKARLEDALAKMR-G 102
                 5777777777777.2 PP

>> PF01105.19  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.5   0.00028     0.051     101     155 ..      50     104 ..       2     107 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 0.00028
  PF01105.19 101 akdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrv 155
                 + +++++a ++++etle  +k+le +++++++ ++  ++ ++rl d++ ++  ++
  MMETSP1325-20131115|7246_1  50 KTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKM 104
                 334678999*************************************999887765 PP

>> PF09537.5  Domain of unknown function (DUF2383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1      0.84   1.5e+02      40      61 ..       6      27 ..       2      41 .. 0.74
   2 ?   12.6   0.3   0.00061      0.11      28      88 ..      50     110 ..      46     111 .] 0.93

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.84
   PF09537.5 40 aaereqaaaeLqaevralggep 61
                +ae++++ ++L+++++++ ++ 
  MMETSP1325-20131115|7246_1  6 IAEHKETEDRLKEQLQKFKHKN 27
                6789999999999999887765 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 0.00061
   PF09537.5  28 kdpelkalfqemaaereqaaaeLqaevralggepeesgslagklhrawidlksaltsddee 88 
                 k+++ ++ ++++++  e+a++eL+  v++l+ + e + + ++ l  a ++++  +++ d+e
  MMETSP1325-20131115|7246_1  50 KTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDDE 110
                 566678899**********************************************999987 PP

>> PF13729.1  F plasmid transfer operon, TraF, protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.21        38      60      92 ..      10      43 ..       2      51 .. 0.70
   2 ?   10.0   0.2    0.0013      0.24      30      76 ..      53     103 ..      44     108 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.21
   PF13729.1 60 deaaerlagaLeeldgdkakasag.vglavavPn 92
                +e+ +rl+++L+++++++    ++ + l + +P+
  MMETSP1325-20131115|7246_1 10 KETEDRLKEQLQKFKHKNQGSMLKgAMLKMKIPK 43
                7899***********9987555540444566665 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.0013
   PF13729.1  30 sdkdnlvdklDdlsdilDdlssaldnsdaa....deaaerlagaLeeldgd 76 
                 s++d l+ +++ l+ ++ +l+ +++  +++    ++ ++rl++aL++++g+
  MMETSP1325-20131115|7246_1  53 SNEDALTQQIETLEAAVKELEGTVEDLQSSleieETEKARLEDALAKMRGK 103
                 47899*******************99887799998899***********98 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.6   0.00022     0.041     377     459 ..       4     102 ..       1     110 [. 0.64

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00022
   PF13166.1 377 elirkhNekidnlkeeknkakkklwlhlv................aelkedideyekklkklekkinslekeleklekeikklekeikelekelkneep 459
                 ++i++h+e+ d+lke+ +k+k k + +++                a+ +++ d+++++++ le+++++le  +e+l+  ++  e+e ++le  l   + 
  MMETSP1325-20131115|7246_1   4 VEIAEHKETEDRLKEQLQKFKHKNQGSMLkgamlkmkipklpigpAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRG 102
                 689999999999999999999988888887777777777777777444444455555555555555555555555555555555555555555544443 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.2   0.00027     0.048     118     170 ..       9      88 ..       4     109 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00027
   PF14362.1 118 qqeeqaaaqaqvaa...........................slsaklaaltaeiaalqaeldeaqaevnaaeeevqcele 170
                 ++e ++ +++q+++                           + ++ + alt++i++l+a+++e++ +v++++  ++ e++
  MMETSP1325-20131115|7246_1   9 HKETEDRLKEQLQKfkhknqgsmlkgamlkmkipklpigpaKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEET 88 
                 555566666666666666666777799999********99999999999**********************999888776 PP

>> PF13675.1  Type IV pili methyl-accepting chemotaxis transducer N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       9.8   1.8e+03      43      57 ..      11      25 ..       3      38 .. 0.61
   2 ?   13.0   0.2   0.00046     0.083      40      95 ..      50     106 ..      43     110 .. 0.69

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 9.8
   PF13675.1 43 earalleqsieefea 57
                e+ + l+++++ f++
  MMETSP1325-20131115|7246_1 11 ETEDRLKEQLQKFKH 25
                344555555555544 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 0.00046
   PF13675.1  40 ddeearalleqsieefeatlaaLqrgddsrg........aseevkaqlaqvealweelrpllea 95 
                 ++e++ ++l+q+ie++ea++++L++  +++         +        a++e+   ++r  +e+
  MMETSP1325-20131115|7246_1  50 KTESNEDALTQQIETLEAAVKELEGTVEDLQssleieetE-------KARLEDALAKMRGKMEK 106
                 5678899*********************999555444443.......44444444444444443 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1       1.3   2.4e+02      47      69 ..       2      24 ..       1      34 [. 0.67
   2 ?   13.1   0.2   0.00039     0.071      69      94 ..      56      81 ..      49      85 .. 0.85
   3 ?    0.6   0.1       3.1   5.7e+02      39      55 ..      92     108 ..      77     111 .] 0.58

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 1.3
   PF10046.4 47 lekeleklkqkyeelkpylqqid 69
                l++e+ + k+ ++ lk++lq+ +
  MMETSP1325-20131115|7246_1  2 LSVEIAEHKETEDRLKEQLQKFK 24
                56666667777777777776644 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00039
   PF10046.4 69 deieeqvtkLeeavkeLDeyskeLEs 94
                d++ +q+++Le+avkeL+  +  L s
  MMETSP1325-20131115|7246_1 56 DALTQQIETLEAAVKELEGTVEDLQS 81
                77889999999999999999998876 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 3.1
   PF10046.4  39 eleqkakslekeleklk 55 
                  le+ +++++ ++ekl+
  MMETSP1325-20131115|7246_1  92 RLEDALAKMRGKMEKLD 108
                 44555555555555554 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1         2   3.7e+02      23      32 ..      15      24 ..       3      36 .. 0.58
   2 ?   13.1   0.7   0.00034     0.062      13      56 ..      53      97 ..      47     100 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 2
   PF14282.1 23 sLqkqiqslt 32
                +L++q+q+ +
  MMETSP1325-20131115|7246_1 15 RLKEQLQKFK 24
                3333333333 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00034
   PF14282.1 13 ssgss.dsqiksLqkqiqsltkqlkelssdeeltaeekqkqqqli 56
                s++   ++qi+ L+  +++l+  +++l+s+ e  ++ek   ++++
  MMETSP1325-20131115|7246_1 53 SNEDAlTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDAL 97
                2222259***********************999999998776665 PP

>> PF07321.7  Type III secretion protein YscO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1       0.4        73      74      98 ..       4      28 ..       1      39 [. 0.73
   2 ?   13.0   2.5   0.00033     0.061      70     121 ..      56     107 ..      50     110 .. 0.95

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.4
   PF07321.7 74 qqvgllrekeaelesqlaeakqrle 98
                 +++  +e e +l++ql++ k + +
  MMETSP1325-20131115|7246_1  4 VEIAEHKETEDRLKEQLQKFKHKNQ 28
                5677777778888888877776654 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 0.00033
   PF07321.7  70 eklqqqvgllrekeaelesqlaeakqrleaererlrqarkqlqearkaqekf 121
                 ++l qq+  l + ++ele  +++ +  le e++++++++++l+++r + ek+
  MMETSP1325-20131115|7246_1  56 DALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKL 107
                 6788*******************************************99997 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   6.5   0.00048     0.087      70     145 ..      24     110 ..      15     110 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00048
   PF04156.9  70 edekiee...........srlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelake 145
                 +++++             ++l++  ++ es  + l +++e+le  ++ele+ +edl++ le +++e+ +le+ l + + + ++l +e
  MMETSP1325-20131115|7246_1  24 KHKNQGSmlkgamlkmkiPKLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDDE 110
                 555555566666666666666666678889999999****************************99999999999999999998876 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0       5.2   9.5e+02      45      57 ..      14      26 ..       4      46 .. 0.60
   2 ?   11.7   0.6    0.0011      0.21      38      66 ..      56      84 ..      47     109 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 5.2
   PF05531.7 45 daqsaqLaeletk 57
                d++ +qL++++ k
  MMETSP1325-20131115|7246_1 14 DRLKEQLQKFKHK 26
                5566666666554 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.0011
   PF05531.7 38 telnekLdaqsaqLaeletkvenIqdiLn 66
                + l+++++ + a+++ele +ve+ q+ L 
  MMETSP1325-20131115|7246_1 56 DALTQQIETLEAAVKELEGTVEDLQSSLE 84
                67899999999999999999999999887 PP

>> PF09006.6  Lung surfactant protein D coiled-coil trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       5.2   9.5e+02      11      19 ..      16      24 ..      12      37 .. 0.79
   2 ?    9.9   0.0    0.0028      0.52       2      20 ..      56      74 ..      55      83 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 5.2
                H---HHHHH CS
   PF09006.6 11 LegqlqrLq 19
                L+ qlq+++
  MMETSP1325-20131115|7246_1 16 LKEQLQKFK 24
                788888875 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0028
                HHHHHHHHHH---HHHHHH CS
   PF09006.6  2 aaLrQqveaLegqlqrLqa 20
                +aL Qq+e+Le  ++ L+ 
  MMETSP1325-20131115|7246_1 56 DALTQQIETLEAAVKELEG 74
                69*************9986 PP

>> PF05524.8  PEP-utilising enzyme, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       7.7   1.4e+03      45      55 ..      14      24 ..       3      41 .. 0.56
   2 ?    6.0   0.3     0.049         9      26      58 ..      51      83 ..      31      87 .. 0.75
   3 ?   10.3   0.4    0.0022      0.41      34      56 ..      87     109 ..      79     111 .] 0.82

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 7.7
   PF05524.8 45 ekareeleela 55
                ++++e+l++ +
  MMETSP1325-20131115|7246_1 14 DRLKEQLQKFK 24
                33333333333 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.049
   PF05524.8 26 pereasdveaEierleaAlekareeleelaeql 58
                +e++ + + ++ie leaA+++++  +e+l+++l
  MMETSP1325-20131115|7246_1 51 TESNEDALTQQIETLEAAVKELEGTVEDLQSSL 83
                334447788899999999999999999998875 PP

  == domain 3    score: 10.3 bits;  conditional E-value: 0.0022
   PF05524.8  34 eaEierleaAlekareeleelae 56 
                 e+E++rle+Al+k+r ++e+l +
  MMETSP1325-20131115|7246_1  87 ETEKARLEDALAKMRGKMEKLDD 109
                 56****************99976 PP

>> PF10279.4  Latarcin precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.0    0.0014      0.26      25      72 ..      57     106 ..       4     110 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.0014
                 ...............XXXXXXXXXXXXXXXXXXXXX-..-----HHHHHH CS
   PF10279.4  25 klmemvnnlRkvqgRLeemvenlrkvedledtEEARg..afkklkdkfkk 72 
                  l++++  l    + Le  ve+l+   + e+tE AR   a +k++ k+ k
  MMETSP1325-20131115|7246_1  57 ALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLedALAKMRGKMEK 106
                 366677777777777*********************84455555555544 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.6     0.038       6.8      74     101 ..       2      29 ..       1      34 [. 0.88
   2 ?   11.5   0.8   0.00096      0.18      63      92 ..      54      83 ..      49      85 .. 0.57
   3 ?    6.7   0.5     0.028       5.1      65      97 ..      77     109 ..      74     111 .] 0.79

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.038
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF01920.15  74 lekeiktlekqleklekeleelkeelyk 101
                 l+ ei + ++ +++l+++l+++k +++ 
  MMETSP1325-20131115|7246_1   2 LSVEIAEHKETEDRLKEQLQKFKHKNQG 29 
                 6789999****************99885 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00096
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15 63 vkeeLeerketlekeiktlekqleklekel 92
                 ++ L +++etle+ +k+le   e+l+  l
  MMETSP1325-20131115|7246_1 54 NEDALTQQIETLEAAVKELEGTVEDLQSSL 83
                345566666666666666666666666554 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.028
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  65 eeLeerketlekeiktlekqleklekeleelke 97 
                 e+L+ ++e  e+e  +le+ l k++ ++e+l +
  MMETSP1325-20131115|7246_1  77 EDLQSSLEIEETEKARLEDALAKMRGKMEKLDD 109
                 778888888888888888888888888888865 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1       4.1   7.4e+02      78      95 ..       5      22 ..       3      24 .. 0.74
   2 ?   10.9   2.9    0.0022       0.4      33      87 ..      54      98 ..      10     108 .. 0.57

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 4.1
   PF09177.6 78 eisrRkqfvaeireeike 95
                ei+++k++ ++++e++++
  MMETSP1325-20131115|7246_1  5 EIAEHKETEDRLKEQLQK 22
                788888888888888776 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.0022
   PF09177.6 33 sskelkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrRkqfva 87
                +++ l+++ + Le+a++++e ++edL+ + ++          +e+e +r ++ +a
  MMETSP1325-20131115|7246_1 54 NEDALTQQIETLEAAVKELEGTVEDLQSSLEI----------EETEKARLEDALA 98
                24445555555666666666666666666555..........4444444444444 PP

>> PF03148.9  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.2      0.29        53     323     348 ..       3      28 ..       1      42 [. 0.60
   2 ?   12.1   1.7   0.00026     0.047      42      93 ..      52     103 ..      48     108 .. 0.70

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.29
   PF03148.9 323 vkEvkeleetieaLkeklaeaeaslk 348
                   E++e +et ++Lke+l++ +++ +
  MMETSP1325-20131115|7246_1   3 SVEIAEHKETEDRLKEQLQKFKHKNQ 28 
                 45666666666666666666665554 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00026
   PF03148.9  42 advtkkLeeRikdiefwkseLereleelkeEieaLeeekrrlekalealelp 93 
                 + +++ L++ i+++e   +eLe ++e+l++  e  e+ek rle+al++++ +
  MMETSP1325-20131115|7246_1  52 ESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGK 103
                 4566677777777777777777777777777777777777777777776654 PP

>> PF02954.14  Bacterial regulatory protein, Fis family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.5    0.0023      0.41       2      21 ..      85     104 ..      84     106 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHHHHT----H CS
  PF02954.14   2 leevEkelIeaALertgGni 21 
                 +ee+Ek+++e+AL++ +G +
  MMETSP1325-20131115|7246_1  85 IEETEKARLEDALAKMRGKM 104
                 69************999976 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.4      0.36        66      18      51 ..       7      40 ..       1      57 [. 0.50
   2 ?   13.1   2.1   0.00045     0.082       3      57 ..      55     109 ..      53     111 .] 0.92

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.36
   PF06156.8 18 eelleeleelkkelkelleenaelkleneklrer 51
                 e  e+ ++lk++l++   +n+   l+ + l+ +
  MMETSP1325-20131115|7246_1  7 AEHKETEDRLKEQLQKFKHKNQGSMLKGAMLKMK 40
                4444444455555555555555444444444444 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00045
   PF06156.8   3 kkelfdklseleeqleelleeleelkkelkelleenaelkleneklrerleelee 57 
                 + +l++++++le  ++el  ++e+l+++l+    e a+l+   +k+r ++e+l++
  MMETSP1325-20131115|7246_1  55 EDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDD 109
                 56899*************************9999****************99875 PP

>> PF13339.1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.3   0.00041     0.075      34      97 ..      43     101 ..      32     111 .] 0.67

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00041
   PF13339.1  34 slp.qeealsefkegneelqealksaekalkklldtlleLreaLleedkksseeeesesakkrkr 97 
                 +lp  + a+ e  ++++ l+++++ +e+a+k+l  t+++L+++L  e+   +e+++ e+a ++ r
  MMETSP1325-20131115|7246_1  43 KLPiGP-AKTE--SNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEE---TEKARLEDALAKMR 101
                 566333.3333..4788999*************************433...33333344433333 PP

>> PF06013.7  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       6.8   1.2e+03      18      31 ..      11      24 ..       5      34 .. 0.62
   2 ?    9.3   0.6    0.0055         1       8      63 ..      50     107 ..      44     110 .. 0.70

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 6.8
   PF06013.7 18 kaaeelesilqrlk 31
                +++++l+++lq+ k
  MMETSP1325-20131115|7246_1 11 ETEDRLKEQLQKFK 24
                45555555555544 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0055
   PF06013.7   8 elrqaakrfqkaaeelesilqrlkaqidalqsgWs..Gaaadafqaafeewkqaaekl 63 
                   ++  +++ ++ e+le+++++l++++++lqs+ +   + + + ++a+++++ ++ekl
  MMETSP1325-20131115|7246_1  50 KTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEieETEKARLEDALAKMRGKMEKL 107
                 5566666788999999999999999999998865543555555666666666666665 PP

>> PF12806.2  Acetyl-CoA dehydrogenase C-terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.5     0.001      0.18      16      52 ..      53      90 ..      46      99 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.001
   PF12806.2 16 esaealaalaerLeaalealeeatkallenaa.kdpee 52
                ++++al +++e Leaa+++le +++ l + ++ ++ e+
  MMETSP1325-20131115|7246_1 53 SNEDALTQQIETLEAAVKELEGTVEDLQSSLEiEETEK 90
                355699********************999888666554 PP

>> PF01499.11  Herpesvirus UL25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.7    0.0017      0.31      20     105 ..       3      98 ..       1     109 [. 0.72

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0017
  PF01499.11  20 riaeesleetrerfalrlrkeaeevkleklkkralkaeLdnle...aksqtrseeiearLreiea.......eleevadaldlletaaaaaeeada 105
                 +++   ++et++r++++l+k + +++   lk  +lk+ + +l    ak+ +++++++++++++ea        +e+ +++l+  et++a+ e+a a
  MMETSP1325-20131115|7246_1   3 SVEIAEHKETEDRLKEQLQKFKHKNQGSMLKGAMLKMKIPKLPigpAKTESNEDALTQQIETLEAavkelegTVEDLQSSLEIEETEKARLEDALA 98 
                 6666788999999*********9***999************96333788899999**********4444444444444444444455555444433 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3      0.76   1.4e+02     161     178 ..       9      26 ..       2      40 .. 0.53
   2 ?   12.6   2.6   0.00044      0.08     117     172 ..      50     104 ..      47     111 .] 0.70

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.76
   PF10211.4 161 reeeekkhadeiaflkkq 178
                 ++e+e + +++++++k++
  MMETSP1325-20131115|7246_1   9 HKETEDRLKEQLQKFKHK 26 
                 333333333333333333 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 0.00044
   PF10211.4 117 eaeqgkselekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadei 172
                 ++e +++ l+++i++le  ++eLe  v++l++ le +e +e+ + e    k++ ++
  MMETSP1325-20131115|7246_1  50 KTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEE-TEKARLEDALAKMRGKM 104
                 678899999********************999876444.33444444444444444 PP

>> PF04012.7  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   7.6    0.0042      0.77      50     138 ..       6     107 ..       2     111 .] 0.71

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0042
   PF04012.7  50 iarqkqlerkleeqkeqakklekkAkaALtkg................eeeLArealaeikslekqaealetqlaqqrsaveqlrkqlealetkieelkakkell 138
                 ia++k++e++l+eq   ++k++ k +  + kg                 e+   ++ ++i++le  +++le  ++ ++s+ e  +++ ++le  +++++ k+e+l
  MMETSP1325-20131115|7246_1   6 IAEHKETEDRLKEQ---LQKFKHKNQGSMLKGamlkmkipklpigpakTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKL 107
                 89999999998765...55666777777777778888**********9444445556667777777777777777777777777777777777777777776665 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1       5.6     1e+03      48      70 ..      13      24 ..       2      36 .. 0.45
   2 ?   13.0   1.1   0.00046     0.084      30      88 ..      37      95 ..      32     111 .] 0.74

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 5.6
   PF08232.7 48 kedLkrrvkmLekalkqeraklk 70
                +             lk++ +k+k
  MMETSP1325-20131115|7246_1 13 E-----------DRLKEQLQKFK 24
                2...........22222222222 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 0.00046
   PF08232.7 30 mkarIakLeGerrglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssa 88
                +k++I kL     + e+ ++ L+++++ Le+a+k+ +  ++ l+++ e e++++   ++
  MMETSP1325-20131115|7246_1 37 LKMKIPKLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLED 95
                78899999877777999999******************999999998888533333333 PP

>> PF08653.5  DASH complex subunit Dam1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.039       7.1       2      26 ..      57      81 ..      56      87 .. 0.85
   2 ?    3.0   0.1      0.43        78       8      24 ..      91     107 ..      84     110 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.039
   PF08653.5  2 alleklaeLaDsmeeLdanltdLqa 26
                al+++++ L+ +++eL+  ++dLq+
  MMETSP1325-20131115|7246_1 57 ALTQQIETLEAAVKELEGTVEDLQS 81
                6889999999999999999999985 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.43
   PF08653.5   8 aeLaDsmeeLdanltdL 24 
                 a+L+D++++++ ++++L
  MMETSP1325-20131115|7246_1  91 ARLEDALAKMRGKMEKL 107
                 57888888888888887 PP

>> PF09849.4  Uncharacterized protein conserved in bacteria (DUF2076)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1       2.4   4.3e+02      65     141 ..      14      35 ..       5      57 .. 0.57
   2 ?   10.7   0.9     0.002      0.36      45      80 ..      57      92 ..      49     110 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 2.4
   PF09849.4  65 eeLeaqlqqaekqseessggFlsslfGgsqkrpaasqpsvqpsaprsawgsgeasqqaaaqqpgyaqpapgsFLgga 141
                 + L++qlq                                                       +++++++gs L+ga
  MMETSP1325-20131115|7246_1  14 DRLKEQLQ-------------------------------------------------------KFKHKNQGSMLKGA 35 
                 34444432.......................................................22333334444444 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.002
   PF09849.4 45 yLvQtvlvqeeALkqlnarieeLeaqlqqaekqsee 80
                +L+Q++  +e+A+k+l+  +e+L++ l+ +e+++++
  MMETSP1325-20131115|7246_1 57 ALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKAR 92
                59*************************997777755 PP

>> PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.5   0.00091      0.17     210     262 ..      56     108 ..      46     111 .] 0.87

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00091
   PF05278.7 210 ekqekelaekEKeikevrekvtemaaklgelemkrarlekrlaflssKvekfk 262
                 ++ ++++   E  +ke+   v+++++ l   e+++arle  la ++ K+ek++
  MMETSP1325-20131115|7246_1  56 DALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLD 108
                 3557889999*******************99*******************985 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1       3.1   5.6e+02      43      57 ..       8      22 ..       2      29 .. 0.56
   2 ?   10.3   3.2    0.0028      0.52       3      51 ..      55     104 ..      50     111 .] 0.58

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 3.1
   PF13747.1 43 aldadrsrLaqeLdk 57
                + ++ + rL ++L k
  MMETSP1325-20131115|7246_1  8 EHKETEDRLKEQLQK 22
                444455555555554 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.0028
   PF13747.1   3 teeleaalkrLeaaldsLesaverrleaerkrdeleaei.qaldadrsrL 51 
                 ++ l +  ++Leaa+++Le  ve+ +++ + ++  +a++  al + r ++
  MMETSP1325-20131115|7246_1  55 EDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLeDALAKMRGKM 104
                 45566666777778888887777777776666544444444444444433 PP

>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.85   1.5e+02     304     326 ..       9      31 ..       2      45 .. 0.74
   2 ?   10.6   1.2   0.00089      0.16     278     331 ..      56     109 ..      47     111 .] 0.74

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.85
                 TSSTT-THHHHHHHHHHHHHHHH CS
  PF02181.18 304 keeesdkfvekleefleeaeekl 326
                  +e +d+++e+l++f ++ + ++
  MMETSP1325-20131115|7246_1   9 HKETEDRLKEQLQKFKHKNQGSM 31 
                 35678888999998888887776 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00089
                 HHHHHHHHHHHHHHHHHHHHHHCHHTTSSTT-THHHHHHHHHHHHHHHHHHHHH CS
  PF02181.18 278 eelekdvkklekglkklekelekseekeeesdkfvekleefleeaeeklkklee 331
                 ++l++++++le  +k+le ++e  +++ e++++ +  le+ l + + k++kl +
  MMETSP1325-20131115|7246_1  56 DALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDD 109
                 667777777777777777777777777777777888888888888888888866 PP

>> PF10805.3  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.2     0.045       8.2      70      95 ..       2      27 ..       1      38 [. 0.92
   2 ?    6.7   1.8     0.029       5.3      39      84 ..      57     107 ..      34     110 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.045
   PF10805.3 70 LkieltelrGelkelsaqiqslshql 95
                L +e++e ++  + l++q+q+++h++
  MMETSP1325-20131115|7246_1  2 LSVEIAEHKETEDRLKEQLQKFKHKN 27
                899*********************97 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.029
   PF10805.3  39 klvekieendkrlseletkleslPtakdvh.....aLkieltelrGelkel 84 
                  l+++ie  ++ ++ele ++e l ++ +++     +L+  l+++rG++++l
  MMETSP1325-20131115|7246_1  57 ALTQQIETLEAAVKELEGTVEDLQSSLEIEetekaRLEDALAKMRGKMEKL 107
                 467788888888888888888888877765222225777788888888776 PP

>> PF05121.7  Gas vesicle protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       2.1   3.7e+02      46      60 ..      11      25 ..       6      33 .. 0.79
   2 ?    9.8   1.7    0.0033      0.59      45      75 ..      59      89 ..      50     104 .. 0.79
   3 ?    2.1   0.2      0.85   1.5e+02      44      67 ..      86     109 ..      79     111 .] 0.81

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 2.1
   PF05121.7 46 eeierlgesLqkLee 60
                e  +rl e+Lqk ++
  MMETSP1325-20131115|7246_1 11 ETEDRLKEQLQKFKH 25
                667889999988765 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0033
   PF05121.7 45 eeeierlgesLqkLeeeleelkeqfeieped 75
                 ++ie l  ++++Le  +e+l++++eie+ +
  MMETSP1325-20131115|7246_1 59 TQQIETLEAAVKELEGTVEDLQSSLEIEETE 89
                579************************9875 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.85
   PF05121.7  44 seeeierlgesLqkLeeeleelke 67 
                  e+e  rl ++L k++ ++e+l +
  MMETSP1325-20131115|7246_1  86 EETEKARLEDALAKMRGKMEKLDD 109
                 567778999999999999999976 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.3       0.7   1.3e+02      32      49 ..       5      22 ..       1      30 [. 0.49
   2 ?   11.3   1.9   0.00089      0.16      27      60 ..      56      88 ..      49      94 .. 0.79
   3 ?    1.4   0.1       1.1     2e+02      25      46 ..      89     110 ..      86     111 .] 0.85

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.7
  PF04977.10 32 elaklkaeneeLeaevkd 49
                e+a+ k+++++L++++++
  MMETSP1325-20131115|7246_1  5 EIAEHKETEDRLKEQLQK 22
                344444444444444433 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00089
  PF04977.10 27 aalqaelaklkaeneeLeaevkdLksdedyieeq 60
                +al++++++l+a  +eLe  v+dL ++   iee 
  MMETSP1325-20131115|7246_1 56 DALTQQIETLEAAVKELEGTVEDL-QSSLEIEET 88
                6899********************.677777765 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 1.1
  PF04977.10  25 eiaalqaelaklkaeneeLeae 46 
                 e a+l++ lak++ + e+L++e
  MMETSP1325-20131115|7246_1  89 EKARLEDALAKMRGKMEKLDDE 110
                 7899999999999999999887 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   9.0     0.013       2.3      42     132 ..      15     108 ..       1     111 [] 0.64

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.013
   PF10473.4  42 lvileaenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervseLeklnsslknlLeekeqekvqikees...ktavemLq 132
                 ++  ++++ k + ++   k   ++ ++ +L +   ++ s+ + L+++++     v+eLe +  +l++ Le +e ek + ++++   + ++e+L 
  MMETSP1325-20131115|7246_1  15 RLKEQLQKFKHKNQGSMLKGAMLKMKIPKLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALakmRGKMEKLD 108
                 5555555555555555555555555666777777778888888888888888888888888888888888888888887776511134555554 PP

>> PF10552.4  ORF6C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.2       2.9   5.3e+02      10      29 ..       6      25 ..       2      40 .. 0.79
   2 ?   11.7   0.8   0.00077      0.14       5      45 ..      57      97 ..      54     109 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 2.9
   PF10552.4 10 leelkekieeieekvedLke 29
                + e+ke  ++++e+++++k 
  MMETSP1325-20131115|7246_1  6 IAEHKETEDRLKEQLQKFKH 25
                67888888888888888874 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00077
   PF10552.4  5 lllealeelkekieeieekvedLkenlpLsageakeiqkkv 45
                +l +++e+l+  ++e+e  vedL+++l + ++e+  ++ + 
  MMETSP1325-20131115|7246_1 57 ALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDAL 97
                578999****************************9998765 PP

>> PF11853.3  Protein of unknown function (DUF3373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.5      0.33        60      36      67 ..       2      33 ..       1      37 [. 0.89
   2 ?   10.5   1.4   0.00078      0.14      19      66 ..      48      97 ..      37     105 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.33
   PF11853.3 36 Lkkeleelkeqlkdlkkkvekiekksagdrlk 67
                L+ e++e ke+++ lk++++k ++k++g+ lk
  MMETSP1325-20131115|7246_1  2 LSVEIAEHKETEDRLKEQLQKFKHKNQGSMLK 33
                7889999999999***********99999887 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00078
   PF11853.3 19 aaaaaaadidklqkiekLkkeleelkeqlkdlkk..kvekiekksagdrl 66
                +a+   ++ +  q+ie L++ ++el+ +++dl++  ++e++ek  ++d l
  MMETSP1325-20131115|7246_1 48 PAKTESNEDALTQQIETLEAAVKELEGTVEDLQSslEIEETEKARLEDAL 97
                5667778878889*****************98873357788887777765 PP

>> PF05064.8  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1       3.3     6e+02      67      86 ..       6      25 ..       1      37 [. 0.66
   2 ?    9.5   2.1    0.0034      0.63      58     106 ..      60     108 ..      52     111 .] 0.91

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 3.3
   PF05064.8 67 vvkaeqeqnkldqeLdfves 86
                + + ++++++l ++L+ +++
  MMETSP1325-20131115|7246_1  6 IAEHKETEDRLKEQLQKFKH 25
                55666667777777765544 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.0034
   PF05064.8  58 ekiskLysevvkaeqeqnkldqeLdfvesqqdeLeslLdryEeeieell 106
                 ++i+ L  +v ++e + + l  +L++ e++++ Le+ L ++  ++e+l 
  MMETSP1325-20131115|7246_1  60 QQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLD 108
                 7999**********************************99999999886 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   3.4    0.0067       1.2      42     114 ..      36     100 ..       2     111 .] 0.42

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0067
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01496.14  42 kleseikkakielkdekekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefl 114
                  l+++i k+ i + ++++++d+ ++        ++e+le+ +ke+e + e L++ l+  e +++ l+ +  ++
  MMETSP1325-20131115|7246_1  36 MLKMKIPKLPIGPAKTESNEDALTQ--------QIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKM 100
                 2334444444444455555555444........4444444444444444444444444444444443333333 PP

>> PF10458.4  Valyl tRNA synthetase tRNA binding arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.2      0.21        38      49      65 ..       7      23 ..       4      24 .. 0.85
   2 ?    2.1   0.2         1   1.9e+02      42      51 ..      63      72 ..      49      85 .. 0.49
   3 ?    9.1   0.5    0.0066       1.2       3      24 ..      87     108 ..      85     110 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.21
   PF10458.4 49 aeleeqleklkerLsqL 65
                ae +e++++lke+L++ 
  MMETSP1325-20131115|7246_1  7 AEHKETEDRLKEQLQKF 23
                789999********986 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 1
   PF10458.4 42 eeekaklael 51
                e  +a ++el
  MMETSP1325-20131115|7246_1 63 ETLEAAVKEL 72
                2223333333 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.0066
   PF10458.4   3 ekeraRLeKelaklekeierlq 24 
                 e e+aRLe  lak+++++e+l+
  MMETSP1325-20131115|7246_1  87 ETEKARLEDALAKMRGKMEKLD 108
                 679****************986 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   6.8     0.025       4.6      43      92 ..      52     101 ..      10     109 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.025
   PF09304.5  43 ksllasleaqkaerekrlrelqakidellknlekeklakleLesrlskae 92 
                 +s   +l +q +  e  ++el+  +++l+  le e   k  Le  l+k+ 
  MMETSP1325-20131115|7246_1  52 ESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMR 101
                 566678999999999999**********9999999999999999999985 PP

>> PF11180.3  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.7      0.19        35     120     186 ..       5      71 ..       2      74 .. 0.85
   2 ?    9.9   2.2    0.0021      0.39     106     163 ..      54     111 .]      48     111 .] 0.91

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.19
   PF11180.3 120 liaasearaerLqadlelareQeaqvaarqkqarkeaaaLeaqreaaqaqLrklqrqirqLqaqqee 186
                 +ia++++   rL+ +l+  ++ ++    + +  +  + +L    +++++  ++l +qi++L+a+ +e
  MMETSP1325-20131115|7246_1   5 EIAEHKETEDRLKEQLQKFKHKNQGSMLKGAMLKMKIPKLPIGPAKTESNEDALTQQIETLEAAVKE 71 
                 6888889999999999999888888888888899999999999999999999999999999998776 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0021
   PF11180.3 106 rraqleaqkaqlerliaasearaerLqadlelareQeaqvaarqkqarkeaaaLeaqr 163
                 +   l  q + le  +++ e  +e Lq+ le++++ +a ++++ +++r  +++L++++
  MMETSP1325-20131115|7246_1  54 NEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDDEK 111
                 5566888999********************************************9987 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1       1.2   2.2e+02      22      99 ..      13      26 ..       3      41 .. 0.57
   2 ?    8.8   2.0    0.0058         1       2      28 ..      59      85 ..      51     105 .. 0.56

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 1.2
                HHHHHHHHHHHTT--SS--B-EE-----EE----S-TTEEEEE-----EEEEEHHHHHHHHHHHHHHHHHHHHHH--- CS
  PF02996.12 22 lektletlktlkkedegkevlvplgaglyvkaevkdtdkvlvdlGagyyveksleeAiellkkkleelekqlekleee 99
                 ++++e l+++k                                                                 +
  MMETSP1325-20131115|7246_1 13 EDRLKEQLQKFKH----------------------------------------------------------------K 26
                3333344444433................................................................3 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0058
                TTTTHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02996.12  2 keeleslqaeleqlkeaieelektlet 28
                 +++e+l+a +++l+ ++e+l+++le+
  MMETSP1325-20131115|7246_1 59 TQQIETLEAAVKELEGTVEDLQSSLEI 85
                344444444444444444444444444 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.098        18      39      63 ..       4      28 ..       1      39 [. 0.78
   2 ?    7.3   2.8     0.023       4.2      29      72 ..      57     100 ..      50     111 .] 0.75

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.098
   PF05103.8 39 keneelkeeieeleekleeykelee 63
                 e++e ke  ++l+e+l+++k++++
  MMETSP1325-20131115|7246_1  4 VEIAEHKETEDRLKEQLQKFKHKNQ 28
                5788889999999999999987654 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.023
   PF05103.8  29 qvikdyeallkeneelkeeieeleekleeykeleeslkkslvva 72 
                  +++++e+l + ++el+  +e+l+++le  ++ +  l+++l   
  MMETSP1325-20131115|7246_1  57 ALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKM 100
                 56678888888888888888888888888888888888877655 PP

>> PF12709.2  Central kinetochore-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2       1.4   2.6e+02      62      76 ..      10      24 ..       2      41 .. 0.51
   2 ?    9.8   1.6    0.0039       0.7      44      82 ..      55      93 ..      50     109 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 1.4
   PF12709.2 62 keeieqLkkqleaer 76
                ke  ++Lk+ql+  +
  MMETSP1325-20131115|7246_1 10 KETEDRLKEQLQKFK 24
                333344444443322 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0039
   PF12709.2 44 eakyekkldelelenkalkeeieqLkkqleaerkekqel 82
                e    ++++ le  +k+l+  +e L++ le+e  ek +l
  MMETSP1325-20131115|7246_1 55 EDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARL 93
                55667899****************************886 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       5.5     1e+03      92     109 ..       7      24 ..       2      41 .. 0.54
   2 ?    9.5   1.7    0.0038       0.7      72     124 ..      57     109 ..      49     111 .] 0.62

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 5.5
   PF07889.7  92 teiredlsaikedvkslk 109
                 +e +e+ + +ke+++++k
  MMETSP1325-20131115|7246_1   7 AEHKETEDRLKEQLQKFK 24 
                 333344444444444433 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.0038
   PF07889.7  72 nlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLesklesles 124
                  l ++++  ++ +ke +  v +++++l+  +++   l++++ ++++k+e+l+ 
  MMETSP1325-20131115|7246_1  57 ALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLDD 109
                 45556666666666666666666666666666666666666666666666654 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.6      0.47        86     116     140 ..       4      28 ..       1      43 [. 0.72
   2 ?    9.9   2.9    0.0024      0.44      70     123 ..      58     109 ..      48     111 .] 0.65

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.47
   PF07106.8 116 eeiqelkkeveeieekLeslkeank 140
                  ei+e k+  ++ +e+L+++k++n+
  MMETSP1325-20131115|7246_1   4 VEIAEHKETEDRLKEQLQKFKHKNQ 28 
                 5777888888888888888887665 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0024
   PF07106.8  70 sdeelnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkk 123
                  +++++ l+a ++el+  v+ l+++ +  e+e+  L+ +l  ++++ ++++l+ 
  MMETSP1325-20131115|7246_1  58 LTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDAL--AKMRGKMEKLDD 109
                 3456666777777777777777777777777777777777..677777777665 PP

>> PF08700.6  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1      0.12        23      57      81 ..      59      83 ..      55      88 .. 0.75
   2 ?    5.2   0.1      0.09        16      58      72 ..      95     109 ..      92     110 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.12
   PF08700.6 57 sdtIrkmksemekldpklselkqai 81
                +++I++++  +++l+ ++++l++++
  MMETSP1325-20131115|7246_1 59 TQQIETLEAAVKELEGTVEDLQSSL 83
                5677888888888888888887776 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.09
   PF08700.6  58 dtIrkmksemekldp 72 
                 d+++km+++mekld+
  MMETSP1325-20131115|7246_1  95 DALAKMRGKMEKLDD 109
                 899**********96 PP

>> PF04859.7  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.3       1.5   2.8e+02     100     126 ..       2      28 ..       1      34 [. 0.77
   2 ?   10.3   1.8    0.0021      0.38      73     127 ..      52     106 ..      43     110 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 1.5
   PF04859.7 100 Leaelrakdseieelrekleeakkank 126
                 L  e+ + ++  ++l+e+l++ k +n+
  MMETSP1325-20131115|7246_1   2 LSVEIAEHKETEDRLKEQLQKFKHKNQ 28 
                 566788888888999999988887776 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.0021
   PF04859.7  73 sakdailaaeiqeqrsllktyeivvkkLeaelrakdseieelrekleeakkankk 127
                 + ++ +l  +i+ +  ++k+ e +v++L+++l+  ++e  +l+ +l++   + +k
  MMETSP1325-20131115|7246_1  52 ESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEK 106
                 456778899999999************************9999999776655554 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.6      0.56     1e+02      69      94 ..       3      28 ..       1      45 [. 0.72
   2 ?    9.8   4.0    0.0017       0.3      68     118 ..      51     101 ..      47     111 .] 0.68

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.56
                XXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7 69 dseldeLkkeeerlleeleelekeed 94
                  e+ e k  e+rl e+l++ +++++
  MMETSP1325-20131115|7246_1  3 SVEIAEHKETEDRLKEQLQKFKHKNQ 28
                56788888888888888888776654 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0017
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  68 ldseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqyl 118
                  +s+ d L +++e l+  ++ele + ++l+  le ++ ek +le+  +++ 
  MMETSP1325-20131115|7246_1  51 TESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMR 101
                 556677788888888888888888888888888888888888876554444 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.9    0.0033      0.59      33     102 ..      38     107 ..      32     111 .] 0.76

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0033
   PF13851.1  33 keeiaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekel 102
                 k +i +l    +k+e++ + ++++++ l++ +k++e  ve L+  l+  e +k+ L+ + ak++ + ++l
  MMETSP1325-20131115|7246_1  38 KMKIPKLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKL 107
                 5666666666677888888899999999999999999999999999999999988887777766555555 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.2     0.034       6.2      53     126 ..      10     108 ..       5     111 .] 0.68

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.034
   PF03938.9  53 qakkkelqkeqknlqsera.......................qlsaeaekakeeelqakeqelqayaqqlq..aelqaeqqevlqklidkiadaikkva 126
                 +++++ l+++ ++++ +++                         +++a  ++ e l+a+++el+   ++lq   e+++++++ l++++ k++ +++k+ 
  MMETSP1325-20131115|7246_1  10 KETEDRLKEQLQKFKHKNQgsmlkgamlkmkipklpigpaktESNEDALTQQIETLEAAVKELEGTVEDLQssLEIEETEKARLEDALAKMRGKMEKLD 108
                 566777777777777776667777777777888887777665666666666666777888888888888885555666666688888888887777765 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.2      0.46        84       8      28 ..       7      27 ..       2      40 .. 0.53
   2 ?    7.7   2.5     0.012       2.1       4      53 ..      52     101 ..      46     111 .] 0.64

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.46
  PF01025.14  8 eeeedeeeeleeeleeleeev 28
                +e +++e+ l+e+l++++++ 
  MMETSP1325-20131115|7246_1  7 AEHKETEDRLKEQLQKFKHKN 27
                344444444444444444433 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.012
  PF01025.14   4 eeeeeeeedeeeeleeeleeleeevkelkdkllrllaefenlrkrtekek 53 
                 e++e++ ++++e+le+ ++ele  v++l+++l+ ++ e   l+  ++k +
  MMETSP1325-20131115|7246_1  52 ESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMR 101
                 56777778888888888888888888888888755444444444444433 PP

>> PF10779.4  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1       2.5   4.6e+02      18      31 ..      10      23 ..       3      41 .. 0.63
   2 ?    5.2   0.1     0.097        18      24      49 ..      50      75 ..      49      77 .. 0.82
   3 ?    9.3   2.2    0.0051      0.93       4      47 ..      58     101 ..      55     109 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 2.5
   PF10779.4 18 eekaenalEkadaa 31
                +e++++++E+ ++ 
  MMETSP1325-20131115|7246_1 10 KETEDRLKEQLQKF 23
                34444455554443 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.097
   PF10779.4 24 alEkadaalekqiknlnkdLskIkkn 49
                + E +++al +qi++l+  +++++ +
  MMETSP1325-20131115|7246_1 50 KTESNEDALTQQIETLEAAVKELEGT 75
                56889999999999999999998876 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.0051
   PF10779.4   4 ikerlnrietklkeeekaenalEkadaalekqiknlnkdLskIk 47 
                 + ++++++e  +ke+e  +++l+   ++ e+ ++ l++ L+k++
  MMETSP1325-20131115|7246_1  58 LTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMR 101
                 56899999******999999************999999999997 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   7.1     0.099        18      14     111 ..      11     110 ..       2     111 .] 0.64

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.099
                 HH-HHHHHHGGGGS-.-TTT---HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HH----HHHHHHHHHHHHHHHHH CS
   PF07200.8  14 qdedkleefvkeldq.vqdlneekeellaqnesLaeenlekepqleelkaqlqdkleelkkleekyeekkqkldel.sskyspealkelLqaaakkadee 111
                 ++ed+l+e +++++   q    +  +l+ ++ +L     + e++ ++l +q++ + + +k+le ++e++++ l+ +  +k  +e ++++++ +++k+d+e
  MMETSP1325-20131115|7246_1  11 ETEDRLKEQLQKFKHkNQGSMLKGAMLKMKIPKLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEeTEKARLEDALAKMRGKMEKLDDE 110
                 5566666666666543444444555555566666666656666666666777777777777888888888887766677777888888888888888776 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   8.3       0.5        91      67     116 ..      54     106 ..       1     110 [. 0.47

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.5
   PF07926.7  67 elaelqkeaselrkeadsakaelneleekw...eeeksmLevelselekkiee 116
                   + l +++++l++ +++ + ++++l+ +    e+ek++Le++l++++ k+e 
  MMETSP1325-20131115|7246_1  54 NEDALTQQIETLEAAVKELEGTVEDLQSSLeieETEKARLEDALAKMRGKMEK 106
                 22333333333333333333333333333211145566666666666666655 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   8.5      0.33        60      66     123 ..      50     108 ..       1     111 [] 0.55

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.33
  PF03962.10  66 klkteleklkkeleelkqrikelqaeiekekkkreet.eereelleelkeleeelkklk 123
                 k +++ ++l++++e l++ +kel+  +e+ +++ e + +e+++l + l++++ +++kl 
  MMETSP1325-20131115|7246_1  50 KTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEeTEKARLEDALAKMRGKMEKLD 108
                 44455555666666666666666666666666555443445555555666665555554 PP

>> PF00992.15  Troponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.5       2.9   5.2e+02      19      31 ..      11      23 ..       3      43 .. 0.53
   2 ?    9.3   5.0    0.0053      0.96      22      83 ..      49     107 ..      24     110 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 2.9
                HHHHHCHHHHHHH CS
  PF00992.15 19 eqrkkeeekekaL 31
                e++++ +e+++  
  MMETSP1325-20131115|7246_1 11 ETEDRLKEQLQKF 23
                2222222222222 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0053
                 HHCHHHHHHHCCCSXSXXXXX.XHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00992.15  22 kkeeekekaLkerieklklsgasraelqeickklheriarleEerydieekvakkdaEiedl 83 
                 +k e  e+aL ++ie+l+   a  +el+  +++l+  ++  e e++++e   ak +  +e+l
  MMETSP1325-20131115|7246_1  49 AKTESNEDALTQQIETLE---AAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKL 107
                 57889999**********...999****************************9998877766 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.3      0.08        15      25      66 ..       2      41 ..       1      43 [. 0.80
   2 ?    4.9   3.6     0.098        18      16      54 ..      56      91 ..      48     111 .] 0.52

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.08
   PF08286.6 25 lqseleelkeeleeleeqenegkeedeeeaeeedsnilklkL 66
                l+ e++e ke+++ l+eq+++   +++++ +  ++++lk+k+
  MMETSP1325-20131115|7246_1  2 LSVEIAEHKETEDRLKEQLQK--FKHKNQGSMLKGAMLKMKI 41
                567889999999999999999..7777777888888888876 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.098
   PF08286.6 16 ndleselenlqseleelkeeleeleeqenegkeedeeea 54
                + l +++e l++ ++el+ ++e+l+ +++    e+ e+a
  MMETSP1325-20131115|7246_1 56 DALTQQIETLEAAVKELEGTVEDLQSSLEI---EETEKA 91
                445555555555555555555555555444...122222 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   5.4     0.055        10     327     408 ..       4      86 ..       1     108 [. 0.56

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.055
   PF03961.8 327 ldepelkeklkeleeeleel..eeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                 ++  e+ke  ++l+e+l+++  +++  +lk ++ k++   + +  +++ ++  + l+++ e l+  ++ele   ++l+++le  
  MMETSP1325-20131115|7246_1   4 VEIAEHKETEDRLKEQLQKFkhKNQGSMLKGAMLKMKI-PKLPIGPAKTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIE 86 
                 45556677778888888888766666666666333333.333444445555555555555555555555555555555555544 PP

>> PF05791.6  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   1.9      0.17        30     115     180 ..       2      70 ..       1      72 [. 0.69
   2 ?    5.4   0.9     0.053       9.7     115     167 ..      58     106 ..      48     110 .. 0.43

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.17
   PF05791.6 115 LqeeiqknqkevkqlleeLkafknklak...dtksfksdvdeltsiLksqgadieklkkeieklqeeik 180
                 L+ ei + +++ ++l e+L++fk+k +    +   +k +  +l    ++++ + ++l ++ie+l++++k
  MMETSP1325-20131115|7246_1   2 LSVEIAEHKETEDRLKEQLQKFKHKNQGsmlKGAMLKMKIPKLPIGPAKTESNEDALTQQIETLEAAVK 70 
                 77899999999***********98754311133456666666666666777777777777777776666 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.053
   PF05791.6 115 LqeeiqknqkevkqlleeLkafknklakdtksfksdvdeltsiLksqgadiek 167
                 L ++i + +  vk+l   +++++++l+ +    ++++++l + L++  +++ek
  MMETSP1325-20131115|7246_1  58 LTQQIETLEAAVKELEGTVEDLQSSLEIE----ETEKARLEDALAKMRGKMEK 106
                 33444444444444444444433333333....22334444444444444444 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2       1.8   3.3e+02      71      95 ..       5      29 ..       1      45 [. 0.61
   2 ?    8.6   2.7     0.012       2.2      63      97 ..      60      94 ..      37     111 .] 0.54

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 1.8
   PF13600.1 71 elaeleaelraledelarleaekea 95
                e+ae ++  ++l+++l++ + ++++
  MMETSP1325-20131115|7246_1  5 EIAEHKETEDRLKEQLQKFKHKNQG 29
                5566666666666666665555554 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.012
   PF13600.1 63 kdadaaseelaeleaelraledelarleaekeale 97
                +++++ +++++ele  +++l++ l+  e ek+ le
  MMETSP1325-20131115|7246_1 60 QQIETLEAAVKELEGTVEDLQSSLEIEETEKARLE 94
                33344444444444444444444444444444444 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   4.9       0.1        19      74     131 ..      50     107 ..       2     110 .. 0.47

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.1
   PF10186.4  74 qirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrt 131
                 +  +  ++l+++ie + + ++el+ ++++++s+le   ++++r+++ lak   +++++
  MMETSP1325-20131115|7246_1  50 KTESNEDALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKL 107
                 3334445566666666666666666666666666655555555555555555555444 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.4      0.44        80      46      63 ..      10      27 ..       1      40 [. 0.70
   2 ?    6.2   2.1     0.048       8.8      26      55 ..      60      89 ..      56     111 .] 0.81

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.44
                ....HHHHHHHHHHHHHH CS
  PF00170.16 46 kkeleelkkevaklksev 63
                k++ ++lk++ +k k ++
  MMETSP1325-20131115|7246_1 10 KETEDRLKEQLQKFKHKN 27
                555567777777766665 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.048
                HHHHHHHHHHHHHHHHH.......HHHHHH CS
  PF00170.16 26 aeieeLeekvkeLeaeNkaLkkeleelkke 55
                ++ie Le  vkeLe+  ++L++ le  + e
  MMETSP1325-20131115|7246_1 60 QQIETLEAAVKELEGTVEDLQSSLEIEETE 89
                789999999999999999999887654444 PP

>> PF01519.11  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   7.2      0.29        53      41     101 ..      50     108 ..       5     109 .. 0.55

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.29
  PF01519.11  41 kiEtkvdqlaqgeqikkltetvekqgeqikelqveqkaqgetlqlilktlekinkrldkle 101
                 k+E ++d  a  +qi+ l+  v+  +  ++ lq   +  +     ++ +l k+  +++kl+
  MMETSP1325-20131115|7246_1  50 KTESNED--ALTQQIETLEAAVKELEGTVEDLQSSLEIEETEKARLEDALAKMRGKMEKLD 108
                 3444444..5666677776777777777777766666555555566677788887777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1369  (0.100132); expected 273.4 (0.02)
Passed bias filter:                      925  (0.0676565); expected 273.4 (0.02)
Passed Vit filter:                       207  (0.0151404); expected 13.7 (0.001)
Passed Fwd filter:                        78  (0.00570509); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              75  [number of targets reported over threshold]
# CPU time: 0.96u 0.34s 00:00:01.30 Elapsed: 00:00:00.61
# Mc/sec: 436.06
//
Query:       MMETSP1325-20131115|7247_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 226.56
//
Query:       MMETSP1325-20131115|7248_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 372.20
//
Query:       MMETSP1325-20131115|7251_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|7249_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-16   61.5   0.0    3.5e-16   60.2   0.0    1.6  2  PF04134.7 Protein of unknown function, DUF393


Domain annotation for each model (and alignments):
>> PF04134.7  Protein of unknown function, DUF393
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.44     6e+03      22      36 ..      20      34 ..       5      62 .. 0.57
   2 !   60.2   0.0   2.6e-20   3.5e-16       1     107 [.      81     189 ..      81     194 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.44
   PF04134.7 22 akerlrfvdiqsakd 36
                +++++   di+ a++
  MMETSP1325-20131115|7249_1 20 RNRNFASSDIEAAEK 34
                334444455522222 PP

  == domain 2    score: 60.2 bits;  conditional E-value: 2.6e-20
   PF04134.7   1 llYDgqCplCakevaflrrldak...erlrfvdiqsakdeellkeag.idkdqllsvlhlvergevlsgsdAalelwrklpgllrllawllr.lprirpvldavYrliarnR 107
                 +l+Dg C++C+++v+f  ++d++   + +rf++ qs+ +++ll++ +  ++++l+s+++ + ++ ++ +sdA+l++ ++l+ ++  la + + +pr   v+d vY+++  nR
  MMETSP1325-20131115|7249_1  81 ILFDGVCNFCDASVNFFMEHDRDpdkGSYRFAAQQSSIGQSLLQQESgKTAEDLQSIVL-ITEDGLYCKSDAVLRIGKGLQEPFPTLAKIGGlVPR--SVRDQVYEFVSANR 189
                 79******************6644449**************99776626699*****99.79999**********************999993455..5************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1086.01
//
Query:       MMETSP1325-20131115|7252_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-12   45.6   0.0    4.9e-12   45.4   0.0    1.2  1  PF01365.16 RIH domain
  ------ inclusion threshold ------
       0.11   12.5   0.1         14    5.8   0.0    2.6  3  PF13443.1  Cro/C1-type HTH DNA-binding domain


Domain annotation for each model (and alignments):
>> PF01365.16  RIH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   7.1e-16   4.9e-12      31     147 ..      26     133 ..       2     135 .] 0.88

  Alignments for each domain:
  == domain 1    score: 45.4 bits;  conditional E-value: 7.1e-16
                 --HHHHHHHHHTTHHHHHHHHHHGGG---.-----.------HHHHHHHHHHHHHHHHHHTT-HHHHHHHHHH--.....-HHHH----HHHHHHHHHHHTT---XXXXXXXXXXXXX CS
  PF01365.16  31 plrqrqkLlrelgvlevvleilqnpleekagdgae.agdekdekmkeivrlcyrlLaafcrgnrqNqallakhldflasillqlqsseGilaldvltavlmnnrellealkeeeiekf 147
                 p ++ q+++r+lg  e+ + +l+           +   +e  e++ e++rl   +L  f+  nr+Nq l ++h+df +       +  Gi  ++v+ta+l+ n+el+ a+  ++i  +
  MMETSP1325-20131115|7252_1  26 PCKKTQDMIRNLGGFETAMTVLELYSSIA-----DaEDEEVRENTTELLRLSNIFLSWFILENRENQMLAYDHIDFFID-----TLDDGIQSANVVTAILKGNPELVRAIPLRTISDI 133
                 67899*****************9888865.....4345888999*******************************5555.....5556********************9988888776 PP

>> PF13443.1  Cro/C1-type HTH DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0    0.0066        45      40      55 ..       4      19 ..       3      20 .. 0.89
   2 ?   -3.7   0.0       1.9   1.3e+04      12      21 ..      64      73 ..      60      74 .. 0.62
   3 ?    5.8   0.0    0.0021        14      23      49 ..     107     133 ..      99     135 .] 0.85

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0066
   PF13443.1 40 ldtLdkiCdaLdctpg 55
                l++L+k+C++ + tp+
  MMETSP1325-20131115|7252_1  4 LRVLAKLCRIRNTTPS 19
                689*******999986 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 1.9
   PF13443.1 12 kktdLargtg 21
                ++t+L r ++
  MMETSP1325-20131115|7252_1 64 NTTELLRLSN 73
                4566666655 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.0021
   PF13443.1  23 srstlsrlvkgeperlsldtLdkiCda 49 
                 s++ ++ ++kg+pe ++   L +i d+
  MMETSP1325-20131115|7252_1 107 SANVVTAILKGNPELVRAIPLRTISDI 133
                 889**********98888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|7253_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 483.63
//
Query:       MMETSP1325-20131115|7255_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|7256_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|7258_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 252.71
//
Query:       MMETSP1325-20131115|7257_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 677.43
//
Query:       MMETSP1325-20131115|7260_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-05   23.2   0.0    6.7e-05   22.9   0.0    1.1  1  PF01590.21 GAF domain
     0.0024   17.8   0.0     0.0028   17.6   0.0    1.1  1  PF13492.1  GAF domain


Domain annotation for each model (and alignments):
>> PF01590.21  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   9.7e-09   6.7e-05       8      81 ..      24      92 .]      23      92 .] 0.93

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 9.7e-09
                HHHHHHHHHCTECEEEEEEEETTTEEEEEEEEEEGHHSHHHHHEECHCCCCCEECCTCTSTEEESSCGGSTTTE CS
  PF01590.21  8 tilrelrellgadrcavalpdldglelylvlgyplsdipqaelslppaggiageviatgrpvvipdvqddprfq 81
                +i+ ++  ll+++r++++l++++  e+   l   ++di   + ++p ++g++g + at ++++++d ++d+rf+
  MMETSP1325-20131115|7260_1 24 KIINSMYDLLQCERVSLFLYEPQTAEF---LCVESADI--LGMRIPEGHGCVGACKATMKVINLSDPYNDERFN 92
                6888999**********9999999999...88888888..999*****************************96 PP

>> PF13492.1  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.1e-07    0.0028      11      68 ..      27      81 ..      20      90 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 4.1e-07
   PF13492.1 11 ellaeilgaeraalylldedgnelrlvagiggdprlseslpedeplvrrvletgepls 68
                  + ++l++er++l+l+++++ e+++v +    ++l++++pe+  +v+++ +t ++++
  MMETSP1325-20131115|7260_1 27 NSMYDLLQCERVSLFLYEPQTAEFLCVESA---DILGMRIPEGHGCVGACKATMKVIN 81
                566689*********************998...89999***99999998877766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 432.28
//
Query:       MMETSP1325-20131115|7261_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       697  (0.0509801); expected 273.4 (0.02)
Passed bias filter:                      504  (0.0368637); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|7262_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.033   12.7   5.0       0.04   12.4   3.4    1.0  1  PF10428.4 RAM signalling pathway protein
        8.3    6.4  16.2        5.2    7.1   8.2    2.0  2  PF07432.8 Histone H1-like protein Hc1
        9.6    5.2  16.2         13    4.7  11.2    1.2  1  PF11593.3 Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF10428.4  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   3.4   8.8e-06      0.04     157     274 ..      34     149 ..      15     160 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.8e-06
   PF10428.4 157 adaesaspsssearntttskllrerkrtptaerspsssprslsnesalessrsvvsnlqvttdvpipssngtsrsstqss.sakssaissgatprsgesfrslptsstssvnagsslde 274
                 + ae+a+++++++++   +++++  ++t ta+   +++ +s      l +++++++ l +++   i+ + +++  +  +s sa  +a +++a+p ++ s  ++p+s+++ +++   + +
  MMETSP1325-20131115|7262_1  34 RRAEGARAAAMNKAKAAKAPTTAAATATATATAAATAL-KS--ATERLDPTQTLNTPLGANASGGIGLVAEKQSLAPSTStSADAAATEKQASPSPSPSPEAMPSSQAGDISPLDVPST 149
                 56788999999999999999999999999999988888.44..4667788877787777777777775444444444444478899999999999999999999999999986655554 PP

>> PF07432.8  Histone H1-like protein Hc1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   8.2    0.0011       5.2      63     106 ..      33      77 ..      22      86 .. 0.75
   2 ?    1.5   0.1     0.061   2.8e+02      55      82 ..     100     125 ..      96     149 .. 0.57

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0011
   PF07432.8  63 kkpakkakkaakakkkaakaaakkaaakaakkakav.kakpatkk 106
                  + a+ a++aa +k+kaaka++  aa+++a++++a+ + k+at +
  MMETSP1325-20131115|7262_1  33 LRRAEGARAAAMNKAKAAKAPTTAAATATATATAAAtALKSATER 77 
                 346788999999999999999888888888777776577877765 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.061
   PF07432.8  55 aeksgllkkkpakkakkaakakkkaaka 82 
                 aek++l   ++++ a +aa ++k+a+ +
  MMETSP1325-20131115|7262_1 100 AEKQSLAP-STSTSADAAA-TEKQASPS 125
                 55555443.4455555333.33444433 PP

>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  11.2    0.0029        13     123     213 ..      39     124 ..       9     155 .. 0.49

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0029
   PF11593.3 123 gkasasasttkksaksnaattsstanTpaaasvkkansasaPnatagvGsaattaaisattattptttakkprkprqtkk.aaaaakkqasa 213
                 ++a a   ++  +a+++aa+t+++++T aa+  k+a     P+   ++    +t+   ++       ++k+   p +++   aaa  kqas 
  MMETSP1325-20131115|7262_1  39 ARAAAMNKAKAAKAPTTAAATATATATAAATALKSATERLDPTQ--TL----NTPLGANASGGIGLVAEKQSLAPSTSTSaDAAATEKQASP 124
                 33333333444455566666666666666655555544444544..33....2222222233333333333334433333123333344332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1005  (0.0735079); expected 273.4 (0.02)
Passed bias filter:                      508  (0.0371562); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 873.34
//
Query:       MMETSP1325-20131115|7264_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|7265_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        8.7    4.1   7.3        9.3    4.0   5.1    1.0  1  PF02724.9 CDC45-like protein


Domain annotation for each model (and alignments):
>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   5.1   0.00068       9.3     138     174 ..      22      57 ..       4      64 .. 0.37

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.00068
   PF02724.9 138 dsdseddeeeeessasekrksesdedeeddddeeded 174
                 d+d +++e+ e+++ +++ ks++++d+++++++ed++
  MMETSP1325-20131115|7265_1  22 DEDITEREVIEKTE-RQDAKSDEENDDKGEEKQEDQE 57 
                 22222222222222.2223333333333344433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       980  (0.0716793); expected 273.4 (0.02)
Passed bias filter:                      608  (0.0444705); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.26u 0.52s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|7263_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-50  170.0   0.1      2e-49  167.9   0.0    1.8  1  PF00069.20 Protein kinase domain
    3.2e-18   65.6   0.0    2.9e-13   49.4   0.0    2.2  2  PF07714.12 Protein tyrosine kinase
    0.00011   21.2   0.1    0.00017   20.6   0.0    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.025   14.1   0.0       0.12   11.9   0.0    2.0  2  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.9   0.0   5.8e-53     2e-49      70     260 .]      16     272 ..       2     272 .. 0.96

  Alignments for each domain:
  == domain 1    score: 167.9 bits;  conditional E-value: 5.8e-53
                 STEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEE.TT--EEE------EEE.....................................CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH.............................HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20  70 kdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLld.kkgelkiaDFGlakkl.....................................eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks.............................eelkdlikkllekdpakRltaeeilkhpwl 260
                  +++y+++e++   dl++++ ++++lse++ + i++q l gl+y+H  g++HrDLKp+NiL+d ++ +++++DFGl++ +                                      +++e++t +v+tr+Y+APEv+l+  +y++++D+Ws+G+il ell +k++++g+++ dql+li k l+ + e d +  ++++                             +e+ dl++ ll++dp kR+++ e+l h wl
  MMETSP1325-20131115|7263_1  16 FNYVYIITELMSR-DLQEIIFSRTPLSEDQQQWIMYQCLAGLNYMHMAGVVHRDLKPSNILIDtDTCDVRLCDFGLSRGVlhedvhdhddetgheplpkgddhidvhpdhaeaeaeeAHQEEEMTVYVVTRWYRAPEVMLEYHKYGTEIDMWSMGCILGELLGRKPLLQGRNTMDQLKLIVKFLGSPDEDDLWYVTNRNarnfmlnmprqtgvdlehkfanflkdggrPEAIDLVRALLAMDPMKRMKCSEALDHTWL 272
                 789********88.*************************************************788899*********99***********************************9888899**********************************************************************99988889********************************************************96 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0   8.6e-17   2.9e-13      76     161 ..      19     102 ..       2     112 .. 0.85
   2 !   14.2   0.0   4.6e-06     0.016     160     203 ..     135     178 ..     123     200 .. 0.72

  Alignments for each domain:
  == domain 1    score: 49.4 bits;  conditional E-value: 8.6e-17
                 EEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT.EEEE-----CEESTTTSCEEE CS
  PF07714.12  76 llivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeek.vvkisDfGLardiekddyykk 161
                 ++i+te+++  dL+e++ ++  + l+ ++   +++q   G++y++   +vHrdL   N+L+++++  v+++DfGL+r + ++d   +
  MMETSP1325-20131115|7263_1  19 VYIITELMSR-DLQEIIFSR--TPLSEDQQQWIMYQCLAGLNYMHMAGVVHRDLKPSNILIDTDTcDVRLCDFGLSRGVLHEDVHDH 102
                 89******86.9*****997..99**************************************98879***********977776633 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 4.6e-06
                 EESTT-EECGGGS.-HHHH.HHSEEEHHHHHHH---HHHHHHTTT- CS
  PF07714.12 160 kkkeeaklpvkWm.apEsl.kekkftsksDvWsfGvllwEiftlge 203
                 +++ +  +  +W+ apE++ +++k+ ++ D+Ws G++l E++   +
  MMETSP1325-20131115|7263_1 135 EEEMTVYVVTRWYrAPEVMlEYHKYGTEIDMWSMGCILGELLG--R 178
                 33344457789999***8725677****************974..4 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0     5e-08   0.00017      94     166 ..      21      89 ..      11     105 .. 0.84

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 5e-08
   PF06293.9  94 llteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDld 166
                 ++te +   +dL+ei+ +   l+e  ++ ++ +  +  + mh agv H+dl + nil+d++    +v l D+ 
  MMETSP1325-20131115|7263_1  21 IITELM--SRDLQEIIFSRTPLSEDQQQWIMYQCLAGLNYMHMAGVVHRDLKPSNILIDTDT--CDVRLCDFG 89 
                 556655..589***999955599999999999*99*************************98..888888875 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.5e-05      0.12     166     185 ..      62      80 ..      15      99 .. 0.82
   2 ?   -0.1   0.0      0.17   5.7e+02      59     103 ..     207     254 ..     123     323 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.5e-05
                 -EEB-SS-SGGGEEEETTTT CS
  PF01636.18 166 pvllHgDlhpgNllvdpddg 185
                 ++++H+Dl+p N+l+d+d +
  MMETSP1325-20131115|7263_1  62 AGVVHRDLKPSNILIDTD-T 80 
                 689*************33.3 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.17
                 E..E-CSSCSCEEEEEE---HHBCCT....CSHHHHHHHHHHHHHHHHH CS
  PF01636.18  59 agdtdddvlgllfalleyvpgevler....klnarqlpallealaella 103
                 ++ t+++ +   +  +++++g +le      l +  +p++++ + +lla
  MMETSP1325-20131115|7263_1 207 WYVTNRNARN-FMLNMPRQTGVDLEHkfanFLKDGGRPEAIDLVRALLA 254
                 3333333333.35556666666666655544444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.48s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 1517.69
//
Query:       MMETSP1325-20131115|7268_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0085   15.9   0.3      0.027   14.2   0.2    1.9  1  PF11804.3 Protein of unknown function (DUF3325)


Domain annotation for each model (and alignments):
>> PF11804.3  Protein of unknown function (DUF3325)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2     2e-06     0.027       2      32 ..     155     185 ..     154     191 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2e-06
   PF11804.3   2 laalllafagfaaLAlAmdrHhedllgrkpa 32 
                 +a l+la+++f+ LA+A +rH++ l+ +k+a
  MMETSP1325-20131115|7268_1 155 FAGLTLAVLSFVSLAVADFRHYDVLVAEKLA 185
                 6889*******************99998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 1467.77
//
Query:       MMETSP1325-20131115|7269_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-90  301.8   3.0    3.6e-83  279.3   0.5    2.0  2  PF01603.15 Protein phosphatase 2A regulatory B subunit (B56 family)
  ------ inclusion threshold ------
      0.013   14.8   0.6       0.17   11.1   0.0    2.2  2  PF12783.2  Guanine nucleotide exchange factor in Golgi transport N-terminal
      0.056   13.5   0.0       0.12   12.5   0.0    1.5  1  PF00984.14 UDP-glucose/GDP-mannose dehydrogenase family, central domain


Domain annotation for each model (and alignments):
>> PF01603.15  Protein phosphatase 2A regulatory B subunit (B56 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.3   0.5   7.9e-87   3.6e-83     142     347 ..       2     210 ..       1     213 [. 0.98
   2 !   23.0   0.0     5e-09   2.3e-05     343     394 ..     224     275 ..     215     279 .] 0.85

  Alignments for each domain:
  == domain 1    score: 279.3 bits;  conditional E-value: 7.9e-87
  PF01603.15 142 fdseDprERdalktflhriygkflglrsfirkainsillrfidetekhngvaelLeilgsiingfavplkeehkdflkkvllpLhkskhlslyhqqLlecvvqfvekdpslaeevirgllkhWPvtnsqKevlfldeleeileklepeefqkvlkplfkilakcissehfqvaerAlklwnneefve...lieqnskeilpilvpalek 347
                 fdseDprERd+lkt+lhriygkf+ +rsfirk+i+++++rf++ete+hng++elLeilgsiingfa+plk+eh++fl+++l+pLh +k++ lyhqqL++c+ q++ekdp  a  ++rgl+k+WP ++s+K+vlf++eleeile l   +++ +  +lf+++++c++s+hfqvaer+l+lwnne++++   l +q+++++lp++++ l++
  MMETSP1325-20131115|7269_1   2 FDSEDPRERDYLKTILHRIYGKFMSHRSFIRKTISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEHTQFLQRALIPLHIPKCVGLYHQQLSYCIIQYIEKDPDTAVVILRGLFKYWPWSSSAKQVLFMNELEEILELLGADQMEIIKMELFNLITDCLNSQHFQVAERTLFLWNNEQLCSngcLSRQYTEILLPMIYNGLYE 210
                 9****************************************************************************************************************************************************************************************98554669************9997 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 5e-09
  PF01603.15 343 paleknakeHWnqavrklalnvlkllmeidpklfeelakklkekekkekkke 394
                 + le+ +k HWn +v+ la+nvlk+ + +d + + ++  + +eke  +k++ 
  MMETSP1325-20131115|7269_1 224 SGLEEKSKGHWNATVQGLAQNVLKMYEGVDITTYTDCVTNRQEKELAKKNEL 275
                 568999******************************9988777777776654 PP

>> PF12783.2  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.026   1.2e+02      68     124 ..      29      86 ..      11     118 .. 0.61
   2 ?   11.1   0.0   3.7e-05      0.17      65      94 ..     149     178 ..     129     183 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.026
   PF12783.2  68 qlirqklcpsLlrnlassk.fpvferslrifllLlkklrskLkleievflselilril 124
                   ir+ + +   r++  ++  + +   l+i+  +++ +   Lk+e   fl+  ++++ 
  MMETSP1325-20131115|7269_1  29 SFIRKTISNVFYRFVYETErHNGIGELLEILGSIINGFAIPLKKEHTQFLQRALIPLH 86 
                 4566677777777777655577777778888888888888888888888877766443 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 3.7e-05
   PF12783.2  65 ellqlirqklcpsLlrnlasskfpvfersl 94 
                 +++++i+ +l+++++ +l+s++f+v er+l
  MMETSP1325-20131115|7269_1 149 DQMEIIKMELFNLITDCLNSQHFQVAERTL 178
                 6789************************97 PP

>> PF00984.14  UDP-glucose/GDP-mannose dehydrogenase family, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.6e-05      0.12       8      42 ..     122     156 ..     119     160 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHHHHHHHHH---HHHH------HHHHH CS
  PF00984.14   8 KlaaNaflatkisfiNelaniaeavgadveevaea 42 
                 K+   +  a ++ f+Nel++i e +gad  e++++
  MMETSP1325-20131115|7269_1 122 KYWPWSSSAKQVLFMNELEEILELLGADQMEIIKM 156
                 666666678999*******************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.60
# Mc/sec: 1114.31
//
Query:       MMETSP1325-20131115|7271_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.33s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 823.75
//
Query:       MMETSP1325-20131115|7270_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 824.35
//
Query:       MMETSP1325-20131115|7272_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-08   33.7   0.0    5.1e-08   32.8   0.0    1.5  1  PF02798.15 Glutathione S-transferase, N-terminal domain
    9.2e-06   25.4   0.0    1.9e-05   24.4   0.0    1.7  1  PF00043.20 Glutathione S-transferase, C-terminal domain
     0.0062   16.2   0.7      0.031   14.0   0.3    2.3  2  PF13410.1  Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.022   14.8   0.0      0.043   13.9   0.0    1.4  1  PF13417.1  Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF02798.15  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   1.5e-11   5.1e-08      28      76 .]       1      47 [.       1      47 [. 0.92

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 1.5e-11
                EEEEGTTCCHCHH.HHHHHHCTTT..S-SSEEEETTTEEEESHHHHHHHHHH CS
  PF02798.15 28 ivrvdfeagegks.pewlklnpki..grvPaledgdglklteSlAIarYlar 76
                ++r+++     ks p w  ++p    g++P+++  dg  +t+S AIarYlar
  MMETSP1325-20131115|7272_1  1 DKRIGM-----KStPTWKEMKPSTrfGQMPIFKTTDGREMTQSKAIARYLAR 47
                578888.....44499**********************************97 PP

>> PF00043.20  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   5.5e-09   1.9e-05      30      95 .]     106     180 ..      74     191 .. 0.87

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 5.5e-09
                 HHHHHHHHHHHHHHHH....TSSSSSSSS-BHHHHHHHHHHHHHHHHTTTTT.....HTT-HHHHHHHHHHHHSH CS
  PF00043.20  30 krkvlevlealeeels....gkkylvGdkltlADialfpalewlqrldgnfl.....eeefPklkawlkriaarp 95 
                   k++e+++ ++   +     + + vG kltlAD+ +f++ +++++  ++ +      ee P+l++ + + aa+p
  MMETSP1325-20131115|7272_1 106 SGKIFEAFKKIDQCVAmsdaADGHMVGGKLTLADCWCFCLMNQFRSGFLDGVprdgwLEELPHLSKVVANTAAHP 180
                 56788888888887777788899*******************9998888888889999********999999997 PP

>> PF13410.1  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       3.6   1.2e+04      59      69 .]      37      47 ..      30      47 .. 0.73
   2 !   14.0   0.3   8.9e-06     0.031      11      67 ..      67     173 ..      60     187 .. 0.69

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 3.6
                T----HHHHHH CS
   PF13410.1 59 ayPnlrawler 69
                  + ++++l+r
  MMETSP1325-20131115|7272_1 37 QSKAIARYLAR 47
                56778888876 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 8.9e-06
                 TT-THGGG-----...............................................-SS.-------HHHHHHHHHHHHHHHHH---....---TT----HHHH CS
   PF13410.1  11 lraaLdaleahLa...............................................dgpfllGdrpslaDialapflvrldaagpgl....direayPnlrawl 67 
                 +++ ++ale+ ++                                               dg  + G++++laD+  ++   +++  +++      ++e++P+l + +
  MMETSP1325-20131115|7272_1  67 VDEYVEALEDARGlfvssfsiqdqeakmaarkalfatdgsgkifeafkkidqcvamsdaaDGH-MVGGKLTLADCWCFCLMNQFRSGFLDGvprdGWLEELPHLSKVV 173
                 566666666666666666666666666666666666666666666666666666677775554.9**************99999666665545555668888876655 PP

>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.3e-05     0.043      37      68 ..      14      46 ..       5      49 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.3e-05
                HHHHH-TT--SSEEE.----EEESHHHHHHHHH CS
   PF13417.1 37 ellalnpkgkvPvLe.ddgevltdSlvIieyLe 68
                e++  ++ g++P+++ +dg+ +t+S +I++yL 
  MMETSP1325-20131115|7272_1 14 EMKPSTRFGQMPIFKtTDGREMTQSKAIARYLA 46
                67788899******7589*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 913.33
//
Query:       MMETSP1325-20131115|7275_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-31  109.0   0.0    1.8e-31  108.7   0.0    1.1  1  PF00464.14 Serine hydroxymethyltransferase


Domain annotation for each model (and alignments):
>> PF00464.14  Serine hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.7   0.0   1.3e-35   1.8e-31     323     398 ..       2      78 ..       1      79 [. 0.96

  Alignments for each domain:
  == domain 1    score: 108.7 bits;  conditional E-value: 1.3e-35
                 ETT----SS-EEEE-T.TSS----HHHHHHHHTT-B-B-------S-TTT----EE--HHHHHTT--HHHHHHHHHH CS
  PF00464.14 323 lvsgGtdnhlvlvdlr.ekgldGkraekvlekvnitankntvPgdksalvtsGlrlGtpaltsrgfkeedlekvaey 398
                 lvsgGtdnhlvlvdl+ ++g+dG+r+e+vle vni++nkntvPgd sa+++sG+r+Gtpalt+rgf+e+d++kvae+
  MMETSP1325-20131115|7275_1   2 LVSGGTDNHLVLVDLKkSRGIDGARVERVLECVNIATNKNTVPGDVSAMTPSGIRMGTPALTTRGFSEADFDKVAEF 78 
                 8**************73689*******************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 766.83
//
Query:       MMETSP1325-20131115|7276_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|7280_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.21   11.1   4.6        2.7    7.5   0.2    2.1  2  PF00983.13 Tymovirus coat protein


Domain annotation for each model (and alignments):
>> PF00983.13  Tymovirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.5   0.00038       5.1     104     125 ..       4      25 ..       2      29 .. 0.85
   2 ?    7.5   0.2    0.0002       2.7     104     125 ..      28      49 ..      20      57 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00038
                 B-----EEE---TT--S-EEEE CS
  PF00983.13 104 vyGgqrfvvGGainssspikvp 125
                 + Gg++++vGGai+  s++ ++
  MMETSP1325-20131115|7280_1   4 ITGGSTLSVGGAITGGSTLAMS 25 
                 569***********99998776 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0002
                 B-----EEE---TT--S-EEEE CS
  PF00983.13 104 vyGgqrfvvGGainssspikvp 125
                 + Gg++++vGGai+   ++k+ 
  MMETSP1325-20131115|7280_1  28 ITGGSTLSVGGAITGDTTLKMT 49 
                 67************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|7274_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-17   63.9   0.1    2.1e-17   63.0   0.1    1.5  1  PF02775.16 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain


Domain annotation for each model (and alignments):
>> PF02775.16  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   0.1   1.5e-21   2.1e-17       1     153 []     171     323 ..     171     323 .. 0.82

  Alignments for each domain:
  == domain 1    score: 63.0 bits;  conditional E-value: 1.5e-21
                 --TCHHHHHHHHHTTSTT-EEEE--SS-----HHCCCHHHCCTST.TS-EEEEE----TTTTGGGHHHHHHC...T--EEEEEEE-SB---HHHHHHHH-SS--GGGCB..-----HHHHHCC---EEE.....EESSH..HHHHHHHHHHHCSSS-EEEEE CS
  PF02775.16   1 diGchtlwaarllkvkrprsyltsgglgtmGyglpaAiGaklakp.drevvaivGDGgflmilqelatavrr...nlpitvvvlnNegygmtggqqepfggkrksgpdgkklkpvdfaklaealGakga.....rvekadveeleealkealekkgpaliev 153
                 d+G+ tlw + +l++   +++l+s  lgtmGy+l a+++a la+p  ++ ++++GDGg++m+l e+at  ++   +  ++vvv++N+++g +      f g +  g +   l+ +d+++la+a+G  g+       e+ + +e++ a+++a+++ g  l +v
  MMETSP1325-20131115|7274_1 171 DTGDITLWSSLCLSLPLGTRVLSSERLGTMGYSLCAGVAATLAQPaPARAIVVAGDGGIQMTLCEMATFSQHkreGDSLLVVVFDNSMLGRVAFG---FVG-S-KGCE---LEGPDLVALAKAYGGAGLrigggE-EPLQDDEVAVAVAAAMASTGLFLMHV 323
                 89**********9999999************************99558***************999999887333558***********988763...222.2.2333...8889*********99998455531.45556788888888888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 1697.01
//
Query:       MMETSP1325-20131115|7281_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 520.06
//
Query:       MMETSP1325-20131115|7282_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.33s 00:00:00.63 Elapsed: 00:00:00.43
# Mc/sec: 284.22
//
Query:       MMETSP1325-20131115|7279_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-29  101.7   0.1    3.5e-29  101.5   0.1    1.1  1  PF13326.1 Photosystem II Pbs27
  ------ inclusion threshold ------
      0.031   12.8   3.2      0.035   12.6   2.2    1.1  1  PF04625.8 DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF13326.1  Photosystem II Pbs27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.5   0.1   5.1e-33   3.5e-29      35     143 ..      49     175 ..       8     177 .. 0.76

  Alignments for each domain:
  == domain 1    score: 101.5 bits;  conditional E-value: 5.1e-33
                 ......................---------.HHHHHHHHHHHHHHHHCS-TT-TTHHHHHHHH---HHHHHCCTTT-------HHHHHHHHHHHHH---TTT----.S--HHHHHHHHHHHHHHHH CS
   PF13326.1  35 a.................aksadpaealsgk.YlkdtrevvktlreslelpkddaerrkaadeakesindyvskYrrggsvsgeaSfatletAlnsLaghYsknGpraplPeevkerilkelkkaee 143
                 a                  + a++++  sgk Y+ d+ +v ++++ + +++k  +++    +++k+++ d+vs Yrr ++v+g++Sf+tl+tA+n LaghY+++G++ p+Pe++++r+ +e+++ e+
  MMETSP1325-20131115|7279_1  49 ApapapapppakanygtfPVPAADEWGISGKdYYADAAKVTRHMQYATQMDKGTPNMDTINKNMKKEMVDFVSFYRRFSNVAGKQSFSTLYTAINVLAGHYTSYGTKFPVPEKRRKRLYQEYAEIEK 175
                 03333334444444453223334444778767*******************************************************************************************9998 PP

>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.2   5.1e-06     0.035     100     151 ..      32      84 ..      16     125 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.1e-06
   PF04625.8 100 pgllgaaapvpapapaaaaapaaasapa.adspaasvpdaaqpailgqaalqn 151
                 p l    apv ap    a+apa a++pa a+  + +vp a +  i g+    +
  MMETSP1325-20131115|7279_1  32 PSLADDEAPVAAPVAEVAPAPAPAPPPAkANYGTFPVPAADEWGISGKDYYAD 84 
                 67777778888888888888888888873345667888888888888766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 942.91
//
Query:       MMETSP1325-20131115|7285_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.78    9.6   4.0        0.9    9.4   1.7    2.1  2  PF03895.10 YadA-like C-terminal region


Domain annotation for each model (and alignments):
>> PF03895.10  YadA-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.7   6.6e-05       0.9       3      41 ..      22      60 ..      20      94 .. 0.85
   2 ?   -1.6   0.0      0.19   2.5e+03       9      21 ..     105     117 ..     101     120 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 6.6e-05
  PF03895.10  3 kearagiAsaaAlaglpqvdapgklsvgaGvGtykgesA 41
                ++ ++++A ++A a+l+  d+p++ s +a++++ k  s+
  MMETSP1325-20131115|7285_1 22 RRSQRAAATSSAFASLFSIDEPSNCSAAAAISGVKPSSS 60
                788899******************999999988776555 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.19
  PF03895.10   9 iAsaaAlaglpqv 21 
                 +A a A +++p++
  MMETSP1325-20131115|7285_1 105 VAIAFAFESVPTL 117
                 7899999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 669.89
//
Query:       MMETSP1325-20131115|7284_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.33s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 1733.53
//
Query:       MMETSP1325-20131115|7287_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 629.04
//
Query:       MMETSP1325-20131115|7288_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.042   13.5   0.9      0.075   12.8   0.6    1.5  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.6   5.5e-06     0.075      19      28 ..       2      11 ..       2      14 .. 0.95

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 5.5e-06
                EETTT--EES CS
  PF00397.21 19 yNheTgetqW 28
                yN+ Tg+tqW
  MMETSP1325-20131115|7288_1  2 YNTVTGQTQW 11
                9********* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|7289_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 437.80
//
Query:       MMETSP1325-20131115|7290_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.65
# Mc/sec: 560.38
//
Query:       MMETSP1325-20131115|7292_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       601  (0.0439585); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 327.67
//
Query:       MMETSP1325-20131115|7293_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.33   10.6   4.0        3.7    7.3   0.5    2.8  2  PF08827.6 Domain of unknown function (DUF1805)
        1.3    9.2   6.6        1.8    8.8   0.9    2.4  2  PF04343.8 Protein of unknown function, DUF488


Domain annotation for each model (and alignments):
>> PF08827.6  Domain of unknown function (DUF1805)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.03     2e+02      19      31 ..       2      14 ..       1      18 [. 0.86
   2 ?    7.3   0.5   0.00054       3.7      19      43 ..      38      62 ..      15      66 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.03
   PF08827.6 19 rVrGVrtiddlLk 31
                 V+GVr + d+  
  MMETSP1325-20131115|7293_1  2 QVQGVRRVVDMRA 14
                599*******976 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.00054
   PF08827.6 19 rVrGVrtiddlLkaeveevtkaAee 43
                 V+GVr + d+ +  v+ + +aA++
  MMETSP1325-20131115|7293_1 38 HVQGVRRVVDMGRRYVSTAADAARA 62
                488**************99999987 PP

>> PF04343.8  Protein of unknown function, DUF488
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.9    0.0038        26      11      32 ..       3      25 ..       1      26 [. 0.81
   2 ?    8.8   0.9   0.00026       1.8      10      33 ..      20      44 ..      17      72 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0038
   PF04343.8 11 kdgvrvlvDvRlwPrSr.npgfs 32
                 +gvr +vD R  P  +  +g++
  MMETSP1325-20131115|7293_1  3 VQGVRRVVDMRARPPTQqVQGVR 25
                589**********9977677665 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00026
   PF04343.8 10 kkdgvrvlvDvRlwPrSr.npgfsk 33
                + +gvr +vD R  P+ +  +g+++
  MMETSP1325-20131115|7293_1 20 QVQGVRRVVDMRARPQTQhVQGVRR 44
                568*************987777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|7295_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       755  (0.0552224); expected 273.4 (0.02)
Passed bias filter:                      520  (0.0380339); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 610.84
//
Query:       MMETSP1325-20131115|7294_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.55
# Mc/sec: 1124.11
//
Query:       MMETSP1325-20131115|7298_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 983.50
//
Query:       MMETSP1325-20131115|7299_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.9   0.0      0.041   13.7   0.0    1.0  1  PF10514.4 Pro-apoptotic Bcl-2 protein, BAD


Domain annotation for each model (and alignments):
>> PF10514.4  Pro-apoptotic Bcl-2 protein, BAD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0     3e-06     0.041      78     111 ..      12      44 ..       3      47 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 3e-06
   PF10514.4  78 GteedeemleeelsPfrgrsrsaPPnlWaaqryG 111
                 Gte    m++   + ++g s saPP++  aq yG
  MMETSP1325-20131115|7299_1  12 GTE-PGSMVGSASNTYKGHSISAPPDVAGAQVYG 44 
                 544.4567799999*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 295.72
//
Query:       MMETSP1325-20131115|7297_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-18   65.5   1.7      4e-18   64.6   1.2    1.5  1  PF00957.16 Synaptobrevin
    1.5e-07   30.7   0.0    2.4e-07   30.0   0.0    1.4  1  PF13774.1  Regulated-SNARE-like domain
  ------ inclusion threshold ------
      0.018   14.6   0.0      0.041   13.4   0.0    1.6  2  PF10876.3  Protein of unknown function (DUF2669)
      0.074   12.2   0.1        0.1   11.7   0.0    1.1  1  PF03706.8  Uncharacterised protein family (UPF0104)
      0.089   12.4   0.0       0.17   11.5   0.0    1.4  1  PF10027.4  Predicted integral membrane protein (DUF2269)


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   1.2   1.4e-21     4e-18       3      88 ..     121     206 ..     119     207 .. 0.97

  Alignments for each domain:
  == domain 1    score: 64.6 bits;  conditional E-value: 1.4e-21
  PF00957.16   3 dklskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklkrkmwwknmklliililvvlililiiiivic 88 
                 +k++++ ++v+ vk +m++Ni+++l +   l++++ k+ +Lqe ++ Fk++a++lkrk+w+k +k+ i+l+++vl+li  + ++ic
  MMETSP1325-20131115|7297_1 121 SKMHEVLQKVETVKLTMQDNIEQALLNCTALEDVEGKAARLQEDSKVFKQNANTLKRKQWYKLIKWQILLVCLVLFLIGGLTLIIC 206
                 79999*************************************************************************99999998 PP

>> PF13774.1  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   8.8e-11   2.4e-07       6      74 ..      27      96 ..      22     115 .. 0.81

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 8.8e-11
   PF13774.1  6 lkklpp...nspqklsyesgnyvfhylvedglvylvvadksyprrlafafLeeikreFlstyggsqiesasp 74
                lk+l+     ++q   +e g+     ++++gl+++v  +k yp+++a a+L+e++r+F+s  +  ++ sa+p
  MMETSP1325-20131115|7297_1 27 LKQLQDnkmANQQHFAFEVGDKAWSLMADEGLIFMVCVKKNYPQSIAAACLKELCRQFMSVGK--DAGSAKP 96
                6666642333358999999999999*********************************98553..3455555 PP

>> PF10876.3  Protein of unknown function (DUF2669)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.4   3.8e+03      25      38 ..      23      36 ..       8      46 .. 0.52
   2 ?   13.4   0.0   1.5e-05     0.041      61     122 ..     139     204 ..     104     210 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 1.4
   PF10876.3 25 avkLlkgvdlsalg 38
                +v++lk+++ ++++
  MMETSP1325-20131115|7297_1 23 VVNMLKQLQDNKMA 36
                33333333333333 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 1.5e-05
   PF10876.3  61 keledlvlkhtsvegadGktyrLs..pdrfdehfnt.yrshllrvlk.eGlkyqfaDfliGGvall 122
                  ++e+ +l+ t++e  +Gk  rL+     f +  nt +r  + +++k + l   +  fliGG +l+
  MMETSP1325-20131115|7297_1 139 DNIEQALLNCTALEDVEGKAARLQedSKVFKQNANTlKRKQWYKLIKwQILLVCLVLFLIGGLTLI 204
                 47**********************544579****99568889999983456677899999998765 PP

>> PF03706.8  Uncharacterised protein family (UPF0104)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.8e-05       0.1     165     222 ..     147     207 ..     133     211 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.8e-05
   PF03706.8 165 ffkklerkkrleerlarlidsfkeslkllsnkall...llallllslliwllnalslylll 222
                  +++le+ ++ + rl++  + fk  + +l++k +     + +ll++l+++l+++l+l++++
  MMETSP1325-20131115|7297_1 147 NCTALEDVEGKAARLQEDSKVFKQNANTLKRKQWYkliKWQILLVCLVLFLIGGLTLIICA 207
                 567899999*******************666666666867777****************97 PP

>> PF10027.4  Predicted integral membrane protein (DUF2269)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   6.3e-05      0.17      39      72 ..     176     209 ..     157     214 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 6.3e-05
   PF10027.4  39 raarlvvladwlltllavillpvtGlwlahlagw 72 
                 +  ++++l++w ++l++++l ++ Gl+l+  a+ 
  MMETSP1325-20131115|7297_1 176 KRKQWYKLIKWQILLVCLVLFLIGGLTLIICAET 209
                 346899**********************998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1040  (0.0760679); expected 273.4 (0.02)
Passed bias filter:                      639  (0.0467379); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.61
# Mc/sec: 872.12
//
Query:       MMETSP1325-20131115|7300_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       73  (0.00533938); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 273.18
//
Query:       MMETSP1325-20131115|7291_1  [L=822]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-12   45.4   0.0    1.1e-11   44.8   0.0    1.3  1  PF00656.17 Caspase domain
     0.0058   15.8   0.0      0.011   14.9   0.0    1.4  1  PF01650.13 Peptidase C13 family
  ------ inclusion threshold ------
      0.051   12.4   0.0      0.083   11.7   0.0    1.2  1  PF01364.13 Peptidase family C25


Domain annotation for each model (and alignments):
>> PF00656.17  Caspase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   2.4e-15   1.1e-11      13     148 ..      39     200 ..      32     305 .. 0.69

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 2.4e-15
                 ST..------HHHHHHHHHHHHHTT-EEEE.........EES--HHHHHHHHHHHHTCSGTBS-EEEEEEE----...B----BE-SSSE-B-HHH......HHHTTSTTT-GGGTTS-E.EEEEES---EETB---EEE-S--SSS-....................- CS
  PF00656.17  13 tk..aeLrGcvnDvermaklLkrlgFeveni.......liddptgknirkalkelvksaksgDvlvvhysGHGtrvpaegededtgydecivpvdkn...lildddfrdlvckslpekpk.tiilDaChsgglideakeqigestkkk....................t 148
                 t   ++L   + Dv +++ +L+    +veni        ++++t++ ++++l++l   a++gDv+v++y+GHGt      ++     d++i   d     +  d d +  +    +++ k +++ D+Chsg l +   e+++++  +                     +
  MMETSP1325-20131115|7291_1  39 TRsgNPLPDVIDDVVAVKTFLEDECPAVENItrfvgrdDTNSLTRQSFLNKLDTLL--AHDGDVFVLYYAGHGTGG----SGALCMQDGYITFEDLVnawVGFDTDKTRAQRY-ARRGKKfVVVADSCHSGALVRQLRETHEQRRRDGlpninmavqvniaqsnxplaS 200
                 44559999*************99999****999977666666**************..889************994....455555566665333322222223222222222.3445578*****************9988877665555444444444433333330 PP

>> PF01650.13  Peptidase C13 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.4e-06     0.011     103     169 ..      95     170 ..      77     174 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 2.4e-06
  PF01650.13 103 sgkeDnvfiyltdhGapg..vlevpeeddleakdLaeaL....kkmhakkky....kklviyleaceSgsmfeellk 169
                   + D   +y++ hG+ g   l +  + +++ +dL +a     +++ ++++y    kk+v++ ++c Sg ++ +l +
  MMETSP1325-20131115|7291_1  95 AHDGDVFVLYYAGHGTGGsgALCMQ-DGYITFEDLVNAWvgfdTDKTRAQRYarrgKKFVVVADSCHSGALVRQLRE 170
                 566788999*****98877799999.9*********9953333234445566555589**************99765 PP

>> PF01364.13  Peptidase family C25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.8e-05     0.083     225     285 ..      79     164 ..      54     173 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.8e-05
  PF01364.13 225 l.lttqnllkalnq.....Gvlfvny.tGHGsetaw..............adesl....stndisaltntnklpiaisaaCltgaf 285
                   lt+q++l++l++     G  fv y  GHG + +                + ++    + + ++++   +k +++++++C++ga 
  MMETSP1325-20131115|7291_1  79 NsLTRQSFLNKLDTllahdGDVFVLYyAGHGTGGSGalcmqdgyitfedlVNAWVgfdtDKTRAQRYARRGKKFVVVADSCHSGAL 164
                 5577888888887777777666665526***9887666776666655555444445566999999999999*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (822 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.19u 0.36s 00:00:01.54 Elapsed: 00:00:00.75
# Mc/sec: 2626.41
//
Query:       MMETSP1325-20131115|7301_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.21   11.1  10.3       0.19   11.3   7.1    1.2  1  PF04360.7 Serglycin


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   7.1   1.4e-05      0.19      92     109 ..      52      69 .]       9      69 .] 0.66

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.4e-05
   PF04360.7  92 sgsgsgsGsGsGsgsGsG 109
                  g g gsGsGsGsgsGsG
  MMETSP1325-20131115|7301_1  52 GGGGGGSGSGSGSGSGSG 69 
                 355666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 324.21
//
Query:       MMETSP1325-20131115|7302_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       779  (0.0569778); expected 273.4 (0.02)
Passed bias filter:                      535  (0.0391311); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 281.11
//
Query:       MMETSP1325-20131115|7303_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.037   12.6   0.0      0.038   12.6   0.0    1.0  1  PF03308.11 ArgK protein
      0.089   12.5   0.0      0.093   12.4   0.0    1.1  1  PF00670.16 S-adenosyl-L-homocysteine hydrolase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.5e-06     0.038      88     120 ..       8      40 ..       1      44 [. 0.85

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.5e-06
                 T-TTEEEEEE---------HHHHHHHHHHHHH- CS
  PF03308.11  88 vdegvfiRslasrGalGGlakktreviklldaa 120
                 +  gvf+Rs++s+ + G l + t + +  l+aa
  MMETSP1325-20131115|7303_1   8 APRGVFFRSMSSGQHDGALIATTSDPVLALQAA 40 
                 6689*******************9998888775 PP

>> PF00670.16  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.4e-05     0.093      44      67 ..      22      44 ..      11      51 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.4e-05
                H---EEEE--S-HHHHHHHHC--- CS
  PF00670.16 44 alGarvivtevdPicalqaameGf 67
                  Ga  i t  dP+ alqaam G 
  MMETSP1325-20131115|7303_1 22 HDGAL-IATTSDPVLALQAAMPGQ 44
                45554.56778**********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       74  (0.00541252); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.69
# Mc/sec: 180.60
//
Query:       MMETSP1325-20131115|7304_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-05   22.2   0.0    5.3e-05   22.0   0.0    1.0  1  PF10498.4 Intra-flagellar transport protein 57


Domain annotation for each model (and alignments):
>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   3.9e-09   5.3e-05      65     160 ..      10     113 ..       4     123 .. 0.76

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 3.9e-09
   PF10498.4  65 efddpnatasnilqelkklglkvd....fppakLksGsGeqvcyvLddLadaaLkkkkf....kfkrpkyekeedeeeeveeddaeiileeveeeqeaeekeqd 160
                 e d pn++a+++l +l  +g ++d    ++p+ L +G+G   + vL+ Ladaa++k k      f  p+ +++ d+  + ++d  ++ + ev +++e+ e e d
  MMETSP1325-20131115|7304_1  10 EEDPPNMVAQRLLIALGLVGFPPDmagrITPTALATGFGGPALEVLNWLADAAVAKAKAdrpsLFWGPERTTDVDPPPSTDQDFGDDHAAEVGDDDEISEAELD 113
                 5588****************8887333358**************************999655556666666666777777666666677777777666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 578.74
//
Query:       MMETSP1325-20131115|7305_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-05   24.6   0.2    5.3e-05   22.8   0.0    1.8  2  PF13374.1 Tetratricopeptide repeat
    1.9e-05   24.3   0.2      2e-05   24.2   0.1    1.0  1  PF13424.1 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.9   0.3       0.21   12.1   0.2    2.0  1  PF13428.1 Tetratricopeptide repeat
      0.096   12.4   0.1        1.1    9.1   0.0    2.0  2  PF13176.1 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   1.5e-08   5.3e-05      11      40 ..       2      31 ..       1      33 [. 0.93
   2 ?   -0.1   0.0      0.25   8.5e+02      31      39 ..      44      51 ..      34      54 .. 0.54

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 1.5e-08
   PF13374.1 11 alrargryeeAlaleeealairrrllGddH 40
                +l ++g+++ A +l++e++a +r+++G+ H
  MMETSP1325-20131115|7305_1  2 LLEDMGDLAGAAELYRECVAGCRAVYGPTH 31
                57799************************9 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.25
   PF13374.1 31 irrrllGdd 39
                + ++ lGdd
  MMETSP1325-20131115|7305_1 44 VLKK-LGDD 51
                2223.3655 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1     6e-09     2e-05      14      65 ..       2      54 ..       1      55 [] 0.94

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 6e-09
   PF13424.1 14 vlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeA 65
                +l+ +gd+  A ely+++++  ++++g++h  t++  + l +++ +lgd + A
  MMETSP1325-20131115|7305_1  2 LLEDMGDLAGAAELYRECVAGcRAVYGPTHEKTLKGARALHRVLKKLGDDEGA 54
                6789*****************9999***********************99877 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   6.2e-05      0.21      10      30 ..       2      22 ..       1      55 [] 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.2e-05
   PF13428.1 10 allalGdpdeAiallrralal 30
                +l+++Gd+++A++l+r+ +a 
  MMETSP1325-20131115|7305_1  2 LLEDMGDLAGAAELYRECVAG 22
                6899*************9884 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00031       1.1       8      34 ..       2      28 ..       1      33 [. 0.82
   2 ?    1.7   0.0     0.074   2.5e+02       4      18 ..      40      54 ..      38      55 .] 0.77

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00031
   PF13176.1  8 lysrlgdyekAielyeraLaltkdpld 34
                l +++gd   A+ely+++ a  ++ ++
  MMETSP1325-20131115|7305_1  2 LLEDMGDLAGAAELYRECVAGCRAVYG 28
                56899************8877766655 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.074
   PF13176.1  4 nLarlysrlgdyekA 18
                +L r+  +lgd e A
  MMETSP1325-20131115|7305_1 40 ALHRVLKKLGDDEGA 54
                577888889999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 244.07
//
Query:       MMETSP1325-20131115|7306_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-13   48.3   0.0    1.5e-12   47.5   0.0    1.4  1  PF00615.14 Regulator of G protein signaling domain


Domain annotation for each model (and alignments):
>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.0   1.1e-16   1.5e-12       5     117 ..       3     150 ..       1     151 [. 0.92

  Alignments for each domain:
  == domain 1    score: 47.5 bits;  conditional E-value: 1.1e-16
                 HHTSS---HHHHHHHHTTTTHHHHHHHHHHHHHCTS--HHHHHHH....HHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS.................................--TTTTHHHHHHHHHHHTTHHHHHHHCSHHHHH CS
  PF00615.14   5 lledqpgrslFreFlesefseenleFwlaveefkkakeqeelskk....akeIynkylapsspkelnidkklreeleknleka...............................qpsrklfeeaqeevfrllekdsypkFlkselylr 117
                 +++d     lF + l+ ef+ e   F+ a++++k+   ++ +  +    +  Iy+++l+++s+ e+n++++ r ++e+ +++a                               q    +++++ +evf+l+e+d  p+Flks+++++
  MMETSP1325-20131115|7306_1   3 IMADTITHDLFVQHLQMEFNMESYLFLVACDRLKEEYGSDGWAMAplteVITIYEQFLKMGSAFEVNVSSSERRRVERAIKDAesalppntnrasyaleegqressdsaqqayrQIPCACLDRVHTEVFSLIENDVLPRFLKSPVWTA 150
                 677888899***************************5555444333455999*************************************************************99999**************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.54
# Mc/sec: 1033.98
//
Query:       MMETSP1325-20131115|7296_1  [L=1314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-27   94.2   0.0    1.2e-26   93.1   0.0    1.5  1  PF00009.22 Elongation factor Tu GTP binding domain
    1.1e-11   44.3   0.0    4.7e-10   39.0   0.0    2.5  1  PF01873.12 Domain found in IF2B/IF5
    1.1e-06   28.4   0.0    2.2e-06   27.5   0.0    1.5  1  PF09173.6  Initiation factor eIF2 gamma, C terminal
    4.3e-05   23.3   0.0    0.00012   21.9   0.0    1.8  1  PF01926.18 50S ribosome-binding GTPase
     0.0023   17.6   0.1      0.061   13.0   0.0    2.4  2  PF00350.18 Dynamin family
  ------ inclusion threshold ------
      0.027   14.4   0.2      0.077   13.0   0.1    1.8  1  PF03144.20 Elongation factor Tu domain 2
        0.1   12.9   0.1       0.82   10.0   0.0    2.4  2  PF08477.8  Miro-like protein
         10    3.7  13.0         15    3.1   9.0    1.2  1  PF05110.8  AF-4 proto-oncoprotein


Domain annotation for each model (and alignments):
>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1   0.0   7.1e-30   1.2e-26       2     179 ..     556     761 ..     555     813 .. 0.85

  Alignments for each domain:
  == domain 1    score: 93.1 bits;  conditional E-value: 7.1e-30
                 GEEEEEEEESTT---HHHHHHHHHHCCCCEHHHHHHHC-..HHHCCHHHH---BBSSEEEEEE................................T...ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.S-HHHHHHHHHHHHTT--.EEEEEE-TTST..........CHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHH CS
  PF00009.22   2 kirnigiighvDhGKtTltdallykagaiskrgeeaegerlldklkeerergiTiksaaisle................................k..etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqTeevlrlakklgvk.iivviNKiDrv..........eaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLl 179
                 +++nig++ghv hGK++++ ++  k  +              +  +e +  g T+k++++++                                 +  ++  ++++++DtPGH d ++++++g+++ Dga+l+v+a+e  + pqT  +l +++++g+  ++v++NK  ++           a le    +++  ++e    +    +p++p+Sa+ g ++d L 
  MMETSP1325-20131115|7296_1 556 PTLNIGVVGHVAHGKSSVIRHMSGKRTQ--------------QHSQERKLHGATVKLGYANCRvcrcagscpapqcfvamggddpalptppcqscEgpTYVVKHVSFVDTPGHHDLINTMLTGASAFDGALLLVAANEAvPAPQTASHLAILSQMGLTnVCVLQNKSELLfgggrsvaegAAALESHAAKVR-AFVEGSAAE---GAPLLPVSAQLGHNMDVLA 761
                 679*******************965532..............234556678999999999999999999999999999*****99999988776516699999***********************************9889****************9**************7777663344444444444.666666555...57*************9765 PP

>> PF01873.12  Domain found in IF2B/IF5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   2.8e-13   4.7e-10      10     110 ..    1144    1262 ..    1135    1272 .. 0.73

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 2.8e-13
                  S----.----S-----B--.--EEES-HHHHHHHH-SSHHHHHHHHHHH..------..-B...-.-..........-EEE----SSSHHHHHHHHHHTHHHHHT--SS-CCEEEEE.- CS
  PF01873.12   10 vaedkkrfkipklevkieGkkkTvisNfsdiakalnRdpeyllkyllae..lgtags..ld...gkd..........rlvvkgkfeekkledvldkyikkyVlCkeCkspeTelike.e 110 
                  +  d++r k+p+++ +++G ++   +Nf   ++ l+R+p++l+ ++ ae  lg+ +   ld   + +          rl+ + +    k+ ++l+ky +++V Ck+C+s +T+l+++ +
  MMETSP1325-20131115|7296_1 1144 ALLDHTRLKVPPPQLVRDGGARALWVNFGATCRVLRRPPSHLAAFIRAEggLGAVSMagLDdisEAGsgscgdllqlRLHTRARALMDKVCKLLRKYCHEFVSCKQCRSAQTTLTRNdD 1262
                  455668****************************************99955555432112211121112222222225566666667788999**********************9944 PP

>> PF09173.6  Initiation factor eIF2 gamma, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   1.3e-09   2.2e-06      26      87 ..     982    1047 ..     975    1048 .. 0.88

  Alignments for each domain:
  == domain 1    score: 27.5 bits;  conditional E-value: 1.3e-09
                  ---TT---EEE----EE---EEEE-..SSEEEEEEEEEEE-SSSS--EE..EEE----EEE----- CS
   PF09173.6   26 klkkkEvlmlnvgsattggvvtavk..kdevkveLkkPvcaekgekvai..srrvekrWrLigwGt 87  
                  kl  k+ l l++gsa t ++v++    + +v+v+L + v+++ g+++a+   rr +k W L g+G 
  MMETSP1325-20131115|7296_1  982 KLAPKDRLKLSIGSAVTTARVKRCSnsQGKVEVALDSVVACRMGDRIAVevRRREGKGWSLAGFGV 1047
                  78999*****************99855678999**************97325889999*****997 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0     7e-08   0.00012       2     102 ..     560     696 ..     559     712 .. 0.67

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 7e-08
                 EEEE--TT---HHHHHHHHCST...CTEETS-TT-SSSESE.EEE..................................ETTE.....EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS....HHHHHHHHHHHHH CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgek...aakvsdypgtTrdite.nev..................................kkek.....iilvDtPGiiegasedkeiegikkylekveradvlllvvdasa....vlkeadkellnel 102
                 +++vG+   GKS++i+ ++g++    ++  + +g T +  + n                                    +  +     + +vDtPG           + i+ +l  +  +d++ll+v a++    +++++  ++l+++
  MMETSP1325-20131115|7296_1 560 IGVVGHVAHGKSSVIRHMSGKRtqqHSQERKLHGATVKLGYaNCRvcrcagscpapqcfvamggddpalptppcqscegP--TyvvkhVSFVDTPGHH---------DLINTMLTGASAFDGALLLVAANEavpaPQTASHLAILSQM 696
                 89*****************86544577888999******44233134445555555555666666665665555444331..13444357******32.........3688899999*****99999977767665555555555544 PP

>> PF00350.18  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   3.6e-05     0.061       1      24 [.     560     583 ..     560     596 .. 0.89
   2 ?    1.9   0.0      0.09   1.5e+02      99     113 ..     642     656 ..     635     690 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.6e-05
                 EEEE--TT---HHHHHHH------ CS
  PF00350.18   1 iavvGsqSaGKSSllnaLlgedil 24 
                 i vvG++ +GKSS++ ++ g++  
  MMETSP1325-20131115|7296_1 560 IGVVGHVAHGKSSVIRHMSGKRTQ 583
                 79******************9865 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.09
                 TS-SEEEEE------ CS
  PF00350.18  99 lvkgltlvDtPGlds 113
                  vk++++vDtPG  +
  MMETSP1325-20131115|7296_1 642 VVKHVSFVDTPGHHD 656
                 5789********865 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   4.5e-05     0.077       1      54 [.     802     864 ..     802     877 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 4.5e-05
                 EEEEEEEEEE--EETTEEEEEETTTCTEEE.........EEEEEEEEEETTCEESEEECEE-- CS
  PF03144.20   1 GtvatgrvysGtlkkGdtvrilgndtskke.........ivtrvrsletfngdldeavagana 54 
                 G v +g + +Gt + Gdt+++++ ++ ++          ivt++ ++   + +l  +v+g  +
  MMETSP1325-20131115|7296_1 802 GGVLGGALLEGTFRCGDTIELRPGRVRRDDkgkvvsfspIVTTIVKIMSGKTSLLSVVPGGLI 864
                 78999******************5555555699**********99999999888888888765 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00048      0.82       2      46 ..     560     604 ..     559     678 .. 0.91
   2 ?   -0.6   0.0      0.93   1.6e+03       9      18 ..     849     858 ..     847     873 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00048
   PF08477.8   2 vvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevd 46 
                 + vvG    GKss ++ + g+  ++ + +++ +g+t+   + +++
  MMETSP1325-20131115|7296_1 560 IGVVGHVAHGKSSVIRHMSGKRTQQHSQERKLHGATVKLGYANCR 604
                 89*********************9999999999999887666665 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.93
   PF08477.8   9 gvGKssllsq 18 
                 ++GK+slls 
  MMETSP1325-20131115|7296_1 849 MSGKTSLLSV 858
                 79*****986 PP

>> PF05110.8  AF-4 proto-oncoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   9.0     0.009        15     437     463 ..     914     939 ..     906     954 .. 0.57

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.009
   PF05110.8 437 sdsSsSeSeSeSsSgSDSesESSssdS 463
                 s +S+S+S+S+S+S+SDS+s+S   dS
  MMETSP1325-20131115|7296_1 914 STGSGSDSDSDSDSDSDSDSDSD-LDS 939
                 33455555555555555555543.233 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       636  (0.0465184); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.95u 0.38s 00:00:02.33 Elapsed: 00:00:00.81
# Mc/sec: 3887.42
//
Query:       MMETSP1325-20131115|7309_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.45    9.7   5.6       0.46    9.7   3.9    1.1  1  PF07423.6 Protein of unknown function (DUF1510)
        1.2    9.0   7.5        1.4    8.8   5.2    1.1  1  PF08432.5 Fungal protein of unknown function (DUF1742)
        2.5    6.5   7.5        2.7    6.3   5.2    1.0  1  PF11711.3 Inner membrane protein import complex subunit Tim54
        2.6    7.3  11.0        2.8    7.2   7.6    1.1  1  PF14153.1 Spore coat protein CotO
        2.8    5.9   9.9        2.8    5.9   6.9    1.0  1  PF05262.6 Borrelia P83/100 protein
        5.8    5.3  14.1        6.3    5.2   9.8    1.0  1  PF12569.3 NMDA receptor-regulated protein 1
        9.8    4.5  15.1         11    4.3  10.5    1.1  1  PF13148.1 Protein of unknown function (DUF3987)


Domain annotation for each model (and alignments):
>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.9   0.00024      0.46      48      95 ..      39      86 ..       8     107 .. 0.58

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00024
   PF07423.6 48 eeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeee 95
                + ++ek++   ++ +e++kee + aak++++++ ++++k   e++++e
  MMETSP1325-20131115|7309_1 39 KLAAEKEAAAAAAAAERKKEEGEAAAKEAEEKRVADEAKAAAEKKAAE 86
                344445555555555555555555555555555223333222222222 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.2   0.00071       1.4      66     123 ..      32      90 ..      15     115 .. 0.40

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00071
   PF08432.5  66 elkeeiekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekekek.eeeekae 123
                 +lke  +k+ +e e++  a++ ++kk++ + ++ke ++++  d+ ++  ek ++e+k +
  MMETSP1325-20131115|7309_1  32 TLKEAQAKLAAEKEAAAAAAAAERKKEEGEAAAKEAEEKRVADEAKAAAEKkAAEAKPT 90 
                 44444444433333333333333332222222222222222222222222202222222 PP

>> PF11711.3  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.2    0.0014       2.7     205     266 ..      41      99 ..      16     113 .. 0.46

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0014
   PF11711.3 205 pepteeeeaaeeevekteaaeeeaeeeeekaeeekeekedeeeeekekpkkppvpkpyiape 266
                 ++++e+++aa+  ++k+  +e ea+++ e++e+ + +++++  e+k +++kp+ p+p  a +
  MMETSP1325-20131115|7309_1  41 AAEKEAAAAAAAAERKK--EEGEAAAK-EAEEKRVADEAKAAAEKKAAEAKPTGPEPAAAAD 99 
                 22222222211111111..22222222.2333333344444555555678888888755544 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   7.6    0.0014       2.8      47      99 ..      36      88 ..       6     111 .. 0.56

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0014
   PF14153.1 47 nekkkekeeeqkeekaeveseeeaeeaesedeqesseqeeiaqeveeeeeeee 99
                +++k + e+e+ +++a++e ++e++ea+ ++ +e++  +e++  +e++ +e++
  MMETSP1325-20131115|7309_1 36 AQAKLAAEKEAAAAAAAAERKKEEGEAAAKEAEEKRVADEAKAAAEKKAAEAK 88
                22233445555555666666666666666665555555555555553333322 PP

>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   6.9    0.0014       2.8     237     292 ..      34      89 ..       7     111 .. 0.58

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0014
   PF05262.6 237 dtaednadkqrkevreklqeaknlpepadvsskkedkkvaeekkreiekaqkeikk 292
                 + a++++  +++ +  +  ++++ +e  +  ++ e+k+va+e k  +ek   e+k 
  MMETSP1325-20131115|7309_1  34 KEAQAKLAAEKEAAAAAAAAERKKEEGEAAAKEAEEKRVADEAKAAAEKKAAEAKP 89 
                 33444444444444444444444444444444444555555555555554444443 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   9.8    0.0032       6.3     403     478 ..      38     110 ..      13     115 .. 0.43

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0032
   PF12569.3 403 aanaelsaaerkklrkkakkaekkaekeeaekaekeee.kkaaekkakkedeetkkkdpdplgekLaktedpLeeAl 478
                 a++    aae++ ++  a  ++kk+e e+a+k+++e++ +++a+++a+k+  e+k++ p+p + +  ++   L+e +
  MMETSP1325-20131115|7309_1  38 AKL----AAEKEAAAAAAAAERKKEEGEAAAKEAEEKRvADEAKAAAEKKAAEAKPTGPEPAAAADPEKPLTLKERM 110
                 111....2222222222222233333333333222222122334444444555555555555555444444455555 PP

>> PF13148.1  Protein of unknown function (DUF3987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  10.5    0.0058        11      65     126 ..      30      92 ..      13     110 .. 0.58

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0058
   PF13148.1  65 eieeelreeyeeelkeykaekeiweaekkglekkakkaakkg.deeaaaeelleleaeepekP 126
                 ++  +  ++  ++ ke+ a+ +++e++k++ e++ak+a++k   +ea+a+++++ ++++p+ P
  MMETSP1325-20131115|7309_1  30 AMTLKEAQAKLAAEKEAAAAAAAAERKKEEGEAAAKEAEEKRvADEAKAAAEKKAAEAKPTGP 92 
                 444344444444445555555556667777777777666666644444445555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1490  (0.108982); expected 273.4 (0.02)
Passed bias filter:                      767  (0.0561001); expected 273.4 (0.02)
Passed Vit filter:                       130  (0.00950848); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.43s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 518.48
//
Query:       MMETSP1325-20131115|7308_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 596.74
//
Query:       MMETSP1325-20131115|7307_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   13.6   0.0      0.042   12.8   0.0    1.3  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.1e-06     0.042     234     260 .]       7      33 ..       3      33 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.1e-06
                 HHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 234 kdlikkllekdpakRltaeeilkhpwl 260
                 + l++kll+ +p++R++a+++++hp++
  MMETSP1325-20131115|7307_1   7 RGLLSKLLAVNPKERISAADAMQHPFF 33 
                 6799*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       857  (0.0626829); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.67
# Mc/sec: 879.86
//
Query:       MMETSP1325-20131115|7310_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-08   32.8   1.7    3.5e-07   29.7   1.2    2.3  1  PF00149.23 Calcineurin-like phosphoesterase
    0.00013   21.7   0.0     0.0002   21.1   0.0    1.4  1  PF12850.2  Calcineurin-like phosphoesterase superfamily domain


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   1.2   5.1e-11   3.5e-07       1     168 [.      52     229 ..      52     236 .. 0.76

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 5.1e-11
                 EEEEEEEEBTBBHHHHHHHHHHHHHHHHHTTTSEEEEE-TTSSGHHCHHHHHHHHH.HCCHHHHTTSCEEEE---TTTHHHHHHHHHSTTHHHHCHSTCSSTCCCEES...........T........EEEEETTEEEEEEETTSHCSTCHHHHHHHHHHHHHH.CCEEESEEEEEESSSSCHHHCTTT CS
  PF00149.23   1 lrilvigDlHgglddleglllilleiaaeekpdlvlflGDlvdrgdwssetlalld.ylvlklllpipvfllrGNHEsdpgnsaygflkeqakdprglanaeeeyeel...........s........itllttsgelgglsglypllggeiqeeqleeflalp.lralvdgkilltHgplsssggssd 168
                 lr+++i+D+Hg +  +             ++ d+++++GD+++ g        + +  +  k +   +v++++GNH++ + + +y +      +  +++  ++ + ++           +        i  +t++g+ + +s + p+ +++++ +      +++ +r ++d ++lltHgp+ ++g+ ++
  MMETSP1325-20131115|7310_1  52 LRFVCISDTHGSHRGT-----------PLPRGDVLVHTGDFSNTGETHQVRDFCEWlVEQKKARGFRHVVVIAGNHDVTMETAYYTQVGAERFHKHRPGGSFDCDATRailtdefsdeiTyledelvvIPNGTPEGCRVWGSPWQPEFNDWAYGLPRGPPMREVcNRIPDDIDVLLTHGPPLGRGDKCK 229
                 5899999999999877...........99****************97766665555779999999999************99999888776654444444444444447998888776615667776788888888887777777777777777777665555525667899***********999886 PP

>> PF12850.2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   2.9e-08    0.0002       2      71 ..      53     155 ..      52     229 .. 0.57

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 2.9e-08
   PF12850.2   2 kiaiiSDlHgnldaleavledikevdlilhaGDlve....p......eevvelledi...pvlavrGnhD.......eaelpkelavel............................l 71 
                 +++ iSD+Hg+ +      + + + d+++h+GD+ +    +      e +ve+ ++     v ++ GnhD       +          +                            +
  MMETSP1325-20131115|7310_1  53 RFVCISDTHGSHRG-----TPLPRGDVLVHTGDFSNtgetHqvrdfcEWLVEQKKARgfrHVVVIAGNHDvtmetayY----------TqvgaerfhkhrpggsfdcdatrailtdeF 155
                 7999*********5.....666777********9665554144333366666666555566*********55544331..........112222234445555555555555554441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 1234.64
//
Query:       MMETSP1325-20131115|7313_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|7312_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-06   27.2   0.0    3.2e-06   26.7   0.0    1.4  1  PF02518.21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase


Domain annotation for each model (and alignments):
>> PF02518.21  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   2.3e-10   3.2e-06      66     108 ..     112     157 ..      63     160 .. 0.87

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 2.3e-10
                 C...SSGGGTT----THHHHHHCCEEEEEEEEECTCT-CEEEEEEE CS
  PF02518.21  66 d...dsrkvggtGlGlsivkklvellggeieveskeggGttvtlrl 108
                 +   d r+++g+GlGl++++ +++++gg++ev+s eg Gt+ +l l
  MMETSP1325-20131115|7312_1 112 NrpaDLRSLSGHGLGLPLSRVYARYFGGDLEVRSVEGFGTDCYLFL 157
                 24558899********************************988866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1051.46
//
Query:       MMETSP1325-20131115|7311_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-08   34.3   0.0    1.8e-08   33.8   0.0    1.2  1  PF00782.15 Dual specificity phosphatase, catalytic domain
     0.0022   17.2   0.1     0.0031   16.7   0.0    1.1  1  PF00102.22 Protein-tyrosine phosphatase


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   2.7e-12   1.8e-08      24     131 ..     147     251 ..     128     253 .. 0.81

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 2.7e-12
                 ETTSSSSEEECCTT---EEEE-----STT--CGGGHHHHHHHHHHHCC----EEEE-----HHHHHHHHHHHHHHCT-.HHHHHHHHHHHHSTT-SS-STTHHHHHHHH CS
  PF00782.15  24 nvtkevpknnadkkseieylripvedetetkiskeleeavefiekaeqkgkkvlVHCqaGisRSatliiaYlmktknl.slneAyefvkerrskispnagflrqLleye 131
                 ++t e p+  + k++  +yl+i   d     + ++leea ++ + a  k++ +++HC++G  RS t+ +a   +   + + +eA+e+vk++r+ ++ n +    L ++ 
  MMETSP1325-20131115|7311_1 147 DLTVEFPE--QCKDTTDHYLNIRCWD-GVPPTPAQLEEAAQMCAMA-CKKGDIMIHCAHGRGRSTTVLVAAVVRAGLFnTWEEAFEAVKKKRPVVRLNSKMRSALTKWA 251
                 44544444..3456777888888777.7788889999998887655.56679***********************999778*****************99988888875 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   4.5e-07    0.0031     135     199 ..     160     221 ..     142     245 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 4.5e-07
                 E.EEEEEES--TTSCGSGSHHHHHHHHHHHHHSSTTSS-EEEES------HHHHHHHHHHHHHHHH CS
  PF00102.22 135 v.kqlhytnWpdhgvpespkslldlirkvrksktaksgpvvVhCsaGvgRtgtfvaldilleqlea 199
                 + + l ++ W   gvp +p +l +  +++      k+g +++hC +G gR+ t++++ ++   l +
  MMETSP1325-20131115|7311_1 160 TdHYLNIRCWD--GVPPTPAQLEEAAQMCAMAC--KKGDIMIHCAHGRGRSTTVLVAAVVRAGLFN 221
                 43566777887..89999999999999999999..89****************9999887666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       402  (0.0294032); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.53
# Mc/sec: 1862.83
//
Query:       MMETSP1325-20131115|7315_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-05   25.2   0.2    8.6e-05   22.3   0.0    1.9  3  PF13041.1  PPR repeat family
    8.6e-05   22.1   0.0     0.0028   17.4   0.0    2.2  2  PF01535.15 PPR repeat
     0.0093   15.3   0.0       0.14   11.5   0.0    2.5  3  PF12854.2  PPR repeat
  ------ inclusion threshold ------
       0.05   14.1   0.0       0.39   11.3   0.0    1.9  2  PF13428.1  Tetratricopeptide repeat
      0.096   12.5   0.0       0.23   11.3   0.0    1.6  2  PF13424.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0025       6.9      30      48 ..       1      19 [.       1      21 [. 0.88
   2 !   22.3   0.0   3.1e-08   8.6e-05       1      45 [.       7      51 ..       7      56 .. 0.92
   3 ?   -0.9   0.0      0.54   1.5e+03      20      30 ..      58      68 ..      54      73 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0025
   PF13041.1 30 kkrgikPnvyTYsilikgl 48
                +k g++P++  ++++i  l
  MMETSP1325-20131115|7315_1  1 QKAGVTPDAPCFNSMITSL 19
                689************9765 PP

  == domain 2    score: 22.3 bits;  conditional E-value: 3.1e-08
   PF13041.1  1 pnvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsili 45
                p+  ++N++I +l + ++ ++A +++++  ++g + +  +Y+i i
  MMETSP1325-20131115|7315_1  7 PDAPCFNSMITSLWHLNQTDSAREMYDKLLSSGAQLTISSYNIKI 51
                56668*************************************966 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.54
   PF13041.1 20 eeAfklfneMk 30
                 eA+ ++ne +
  MMETSP1325-20131115|7315_1 58 PEALAVLNELR 68
                58999999986 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0     1e-06    0.0028       2      30 ..      11      39 ..      10      40 .. 0.95
   2 ?    2.6   0.0     0.054   1.5e+02      16      28 ..      57      69 ..      55      71 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1e-06
  PF01535.15  2 tynslIsgyckaGkleeAlelfkeMkekG 30
                ++ns+I ++ + ++ + A e++++++++G
  MMETSP1325-20131115|7315_1 11 CFNSMITSLWHLNQTDSAREMYDKLLSSG 39
                69***********************9988 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.054
  PF01535.15 16 leeAlelfkeMke 28
                l eAl +++e++ 
  MMETSP1325-20131115|7315_1 57 LPEALAVLNELRA 69
                679*******985 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   5.2e-05      0.14       2      31 ..       4      33 ..       3      35 .. 0.86
   2 ?   -1.9   0.0      0.78   2.1e+03       4      12 ..      41      49 ..      38      50 .. 0.73
   3 ?    0.7   0.0      0.12   3.4e+02      23      33 ..      57      67 ..      56      68 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5.2e-05
   PF12854.2  2 GlkPdvvTYNtLIdGlCraGrvdeAvelld 31
                G+ Pd+ ++N++I +l   +  d A e+ d
  MMETSP1325-20131115|7315_1  4 GVTPDAPCFNSMITSLWHLNQTDSAREMYD 33
                99************9988888888888877 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.78
   PF12854.2  4 kPdvvTYNt 12
                + ++ +YN+
  MMETSP1325-20131115|7315_1 41 QLTISSYNI 49
                667789997 PP

  == domain 3    score: 0.7 bits;  conditional E-value: 0.12
   PF12854.2 23 vdeAvelldeM 33
                + eA+ +l+e 
  MMETSP1325-20131115|7315_1 57 LPEALAVLNEL 67
                679*****995 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00014      0.39       9      30 ..      17      38 ..      12      43 .. 0.87
   2 ?    0.5   0.0      0.42   1.1e+03      18      29 ..      58      69 ..      56      73 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00014
   PF13428.1  9 rallalGdpdeAiallrralal 30
                  l++l+++d A+++++++l+ 
  MMETSP1325-20131115|7315_1 17 TSLWHLNQTDSAREMYDKLLSS 38
                579****************985 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.42
   PF13428.1 18 deAiallrrala 29
                 eA+a+l+++ a
  MMETSP1325-20131115|7315_1 58 PEALAVLNELRA 69
                589999999865 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.3e-05      0.23       6      34 ..      10      38 ..       7      49 .. 0.84
   2 ?   -1.7   0.0      0.91   2.5e+03      23      30 ..      59      66 ..      56      71 .. 0.51

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 8.3e-05
   PF13424.1  6 tilnnlalvlrrlgdydeAlelyekalel 34
                 + n + ++l++l + d+A+e+y k l  
  MMETSP1325-20131115|7315_1 10 PCFNSMITSLWHLNQTDSAREMYDKLLSS 38
                578889999**************999876 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.91
   PF13424.1 23 eAlelyek 30
                eAl+ +++
  MMETSP1325-20131115|7315_1 59 EALAVLNE 66
                44444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 337.27
//
Query:       MMETSP1325-20131115|7316_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 670.98
//
Query:       MMETSP1325-20131115|7318_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.55
# Mc/sec: 967.26
//
Query:       MMETSP1325-20131115|7317_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-30  103.6   0.1    6.7e-30  103.3   0.0    1.1  1  PF00293.23 NUDIX domain


Domain annotation for each model (and alignments):
>> PF00293.23  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.3   0.0   4.9e-34   6.7e-30       2     133 ..      83     242 ..      82     244 .. 0.96

  Alignments for each domain:
  == domain 1    score: 103.3 bits;  conditional E-value: 4.9e-34
                 EEEEEEEEEETTSEEEEEEECSTTSSTTEEEESBEEETTT.TSHHHH.................HHHHHHHHHHS-EE.....EEEEEEEEEEEEETTCCC......SEEEEEEEEEEEEETGGGCSTTTSTEEEEEEEEHHHHHHHHHCTTHHHHHHHHH CS
  PF00293.23   2 rlavsvillnedgkvLlvqrsrskltapglwefPgGkvdk.gEspee.................aAvRElkEEtGidl.....ekvrlvgvanydaptddp......kreevifflaelpddepeiilnttEvsevrwvpleelldlalagklryliplll 133
                 ++a+sv+l++e+g++Ll+qr+++k+t+p++w+++++++++ g sp+e                 aAvR+lk+E+Gi++     ek+ ++++++y+a +  +      ++e++i++++++++      +n++Ev+++r+v+ +el++++++ +   ++p+++
  MMETSP1325-20131115|7317_1  83 HRAFSVFLFDEQGRLLLQQRASTKITFPNVWTNTCCSHPLhGYSPTEvdepadvangttpgvkrAAVRKLKHELGIEPeqvpvEKFKFLTRLHYWAADTVThgpsaeWGEHEIDYVLFFQGKV-DTKANPEEVDDIRYVTQDELRAMMDPSSGLLWSPWFR 242
                 99*************************************************************************************************************************.7777888*****************9999777999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1256.86
//
Query:       MMETSP1325-20131115|7319_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   13.6   2.8      0.037   13.4   1.9    1.2  1  PF03073.10 TspO/MBR family


Domain annotation for each model (and alignments):
>> PF03073.10  TspO/MBR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.9   2.7e-06     0.037      95     140 ..      16      61 ..       2      62 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.7e-06
  PF03073.10  95 slalalieillllllvlatilaflkvsrlaalllvPYllWvsfaty 140
                  +a+a++++++ +++v+  ++ ++++s l ++ l PY + +++a++
  MMETSP1325-20131115|7319_1  16 PPAVAAVVAVAAVAAVADAVADAWRSSALMGVRLEPYSITLVYAAA 61 
                 5789***************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 317.88
//
Query:       MMETSP1325-20131115|7321_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.1   0.7      0.027   14.3   0.4    1.6  1  PF05725.7 FNIP Repeat


Domain annotation for each model (and alignments):
>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.4     2e-06     0.027       7      41 ..      24      58 ..      19      59 .] 0.91

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2e-06
   PF05725.7  7 igeLPsnleiLilgrdFnqkil..igsLPnSlkeLyF 41
                i  LP++++ L+l  +F + ++  i  LP+S++ L++
  MMETSP1325-20131115|7321_1 24 IKDLPQSITDLNL--EFCRGLEgnIKYLPQSITDLNL 58
                679**********..******999*********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 261.82
//
Query:       MMETSP1325-20131115|7322_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 555.75
//
Query:       MMETSP1325-20131115|7326_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-45  154.6   0.4    6.3e-45  153.0   0.3    1.6  1  PF00232.13 Glycosyl hydrolase family 1


Domain annotation for each model (and alignments):
>> PF00232.13  Glycosyl hydrolase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.0   0.3   4.6e-49   6.3e-45      66     181 ..       2     133 ..       1     137 [] 0.86

  Alignments for each domain:
  == domain 1    score: 153.0 bits;  conditional E-value: 4.6e-49
                 HHHH----EEEEE--HHHHSS--.----------HHHHHHHHHHHH---EEEEEEESS--BHHHHH--.......---S........THHHHHHHHHHHHHHHHT----SEEEEEB-HHHHHHHHHT----- CS
  PF00232.13  66 llkelgvkayrfSiaWsRilPkG.kegeineaGldyYdrLidelleagieplvTLyHwdlPqaLqdeg.......gwen........rsiidaFkeYaevvfkrfgdkvklwlTfneplvvallgyltgeha 181
                 l+  lg+k yrfSiaW+Ri+P+G  +  +ne+Gl+yYd+Lidell++gi+p+vTLyHwdlPqaL +++       gw +         + +d+F ++a+++f+r+gd+vk+wlTfne +++ +lg + g+ +
  MMETSP1325-20131115|7326_1   2 LMVSLGLKNYRFSIAWPRIVPTGsVADGVNEKGLQYYDNLIDELLANGITPYVTLYHWDLPQALLNADnatnptyGWYEtdesghpnAKAVDHFVDFAKICFSRYGDRVKTWLTFNEAWTFLYLGSGNGKAP 133
                 8999*******************88999***********************************96533122233344434555555499*************************************999754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.55
# Mc/sec: 596.91
//
Query:       MMETSP1325-20131115|7328_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 386.78
//
Query:       MMETSP1325-20131115|7330_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 563.85
//
Query:       MMETSP1325-20131115|7331_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 221.20
//
Query:       MMETSP1325-20131115|7329_1  [L=326]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-17   62.7   7.0      3e-17   62.3   4.9    1.1  1  PF05462.6  Slime mold cyclic AMP receptor
      4e-13   48.9   6.5      6e-13   48.4   4.5    1.2  1  PF00001.16 7 transmembrane receptor (rhodopsin family)
    1.2e-06   28.1   0.7    1.2e-06   28.1   0.5    2.6  3  PF11970.3  G protein-coupled glucose receptor regulating Gpa2 C-term
    0.00032   19.7   7.0    0.00044   19.3   4.9    1.2  1  PF00002.19 7 transmembrane receptor (Secretin family)
     0.0089   15.1   2.7      0.019   14.0   2.0    1.6  2  PF10320.4  Serpentine type 7TM GPCR chemoreceptor Srsx
  ------ inclusion threshold ------
      0.013   14.9   4.3      0.025   14.1   2.8    1.6  1  PF11710.3  G protein-coupled glucose receptor regulating Gpa2
       0.62    9.3  11.0      0.031   13.6   0.7    2.6  3  PF13491.1  Domain of unknown function (DUF4117)


Domain annotation for each model (and alignments):
>> PF05462.6  Slime mold cyclic AMP receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   4.9   1.5e-20     3e-17      67     242 ..      34     222 ..       9     237 .. 0.80

  Alignments for each domain:
  == domain 1    score: 62.3 bits;  conditional E-value: 1.5e-20
   PF05462.6  67 eeavesgfpcylyaivitygslacwlwtlclaisiynlivkrepepekfekyy..yllcwglplistivmlakevvevvgnwcwigee.y.....vgyrfglfygpfliifavsav.lvgl..tsrytykvirnsvsdnkdkhltyqfklinyiivflvcwvfavvnrilnglnlf.p.aavnilhtyl 242
                  + +++g+ cy+  + it+  l+   w++++ + +y+ ivk+e e + +e+ +  +ll+wg  +i++++ l+++     g wcwi+ e y     +++rf++fy+p++i+ + + v  v +  t r   ++ + + + ++++  +    l  y ++f+  w +  v r+ n+++ + p +++++l+  +
  MMETSP1325-20131115|7329_1  34 GAPTDGGLGCYVQGVAITFFDLSSVWWSFLIGYKLYRSIVKQEVEIQTLERTFkmHLLVWGSSFIAALLPLTTHNYGDAGAWCWISAEaYdsgtgTAWRFAIFYVPIWIVAFATMVhYVAIirTLRGVANMQHFAGTAQQERLERLARSLSLYPLIFVASWTMITVVRVYNSIAPHhPsYWLTVLQVLF 222
                 4556789*******************************************98645899***************************8642644433579********9987554443145442266777777888888888888889999999********************97431423555555554 PP

>> PF00001.16  7 transmembrane receptor (rhodopsin family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   4.5   3.1e-16     6e-13      51     249 ..      37     232 ..       2     235 .. 0.85

  Alignments for each domain:
  == domain 1    score: 48.4 bits;  conditional E-value: 3.1e-16
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTT---HHHHHTTTSSSHHHHHTTTT---XX...XX..XXXHHHHHHHHHHHH CS
  PF00001.16  51 kfgralCklvvaldvvactasillltaisiDRYlaitrplkykrkrtkrraavlillvWllsfllslpplllswsnteeeeeataclisfpsekersytllstlvafvlpllvilvlylriyralrkrakklaskrsskrkkslkkekkaaktlliivlvfilcwlPffilvllntlckss...el.vpetllslflwlayvn 249
                 + g ++C ++ +  +++ ++s++   +i +  Y +i+   +   ++t +r++ + llvW  sf+ +l+p l + ++ ++     +c+is ++ + + + +   +++f++p+++++++ +  y a+ ++ + +a++++   ++++++  ++a+ l+++ l+f+  w+ + ++ ++n++ +++   +l v+++l+s + + a++n
  MMETSP1325-20131115|7329_1  37 TDGGLGCYVQGVAITFFDLSSVWWSFLIGYKLYRSIV--KQEVEIQTLERTFKMHLLVWGSSFIAALLP-LTTHNYGDAG---AWCWISAEAYD-SGTGTAWRFAIFYVPIWIVAFATMVHYVAIIRTLRGVANMQHFAGTAQQERLERLARSLSLYPLIFVASWTMITVVRVYNSIAPHHpsyWLtVLQVLFSPMSMQAVLN 232
                 557799*******************************..68999*************************.4435665555...5*****99995.8888999999*********99999999999999999999999999*****************************************5443356666666665555555 PP

>> PF11970.3  G protein-coupled glucose receptor regulating Gpa2 C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       3.2   6.2e+03      22      40 ..      90     108 ..      88     120 .. 0.66
   2 ?    2.9   0.2     0.045        87      19      37 ..     135     153 ..     133     166 .. 0.83
   3 !   28.1   0.5   6.2e-10   1.2e-06       2      60 ..     171     227 ..     170     239 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 3.2
   PF11970.3  22 illwifPfvahvlqynyel 40 
                 +l+w   f+a +l  + + 
  MMETSP1325-20131115|7329_1  90 LLVWGSSFIAALLPLTTHN 108
                 6788888998888877663 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.045
   PF11970.3  19 laYillwifPfvahvlqyn 37 
                 ++Y+ +wi+ f+  v +++
  MMETSP1325-20131115|7329_1 135 IFYVPIWIVAFATMVHYVA 153
                 79********998877665 PP

  == domain 3    score: 28.1 bits;  conditional E-value: 6.2e-10
   PF11970.3   2 krrkqiekqlkslfiYPlaYillwifPfvahvlqynyelkqkpviwlllvaalsqplng 60 
                  +++++e+  +sl +YPl++++ w++ +v++v  yn+ ++++p++wl+++++l+ p++ 
  MMETSP1325-20131115|7329_1 171 AQQERLERLARSLSLYPLIFVASWTMITVVRV--YNSIAPHHPSYWLTVLQVLFSPMSM 227
                 6899*********************7666666..6666****************99764 PP

>> PF00002.19  7 transmembrane receptor (Secretin family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   4.9   2.2e-07   0.00044      72     218 ..      41     200 ..       3     223 .. 0.67

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 2.2e-07
                 X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX..XXXXXXXXX.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXX CS
  PF00002.19  72 v.CkvvavflhYfllanffWllvEglylylllvvt...ffserkklkvylliGwgvPavvvvvwaivrkagyenekc..Wlsnekkll.........wiikgpvlliilvNfvllinilrvlvqklrsketsekekkrk..klvkstlvllpLLGityvlflfa 218
                 + C v  v + +f l++  W ++ g++ly+ +v+    + ++ +++ + +l+ wg  ++  ++ ++++  +y++++   W+s e++ +          i+ +p+ ++ +  +v  + i+r+l    + ++ + + ++++  +l++s  +  +++  ++++++++
  MMETSP1325-20131115|7329_1  41 LgCYVQGVAITFFDLSSVWWSFLIGYKLYRSIVKQeveI-QTLERTFKMHLLVWGSSFIAALLPLTTH--NYGDAGAwcWISAEAY-DsgtgtawrfAIFYVPIWIVAFATMVHYVAIIRTLRGVANMQHFAGTAQQERleRLARSLSLYPLIFVASWTMITVV 200
                 34******************************9988533.3344566677777**9877777766666..8999775227776533.23556663434677888888888888888999999877774444443333333356666555555567778775443 PP

>> PF10320.4  Serpentine type 7TM GPCR chemoreceptor Srsx
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.1   2.2e+03      17      37 ..       5      25 ..       2      30 .. 0.84
   2 !   14.0   2.0   9.6e-06     0.019     146     209 ..     133     203 ..      43     236 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.1
   PF10320.4 17 kkkkLrskcsiLicvqcladl 37
                +  +Lr +  +L++ +c++d+
  MMETSP1325-20131115|7329_1  5 RFPELRKPQFVLVFWLCVSDI 25
                66789999999******9997 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 9.6e-06
   PF10320.4 146 feiftlssviinvlvllvyivliiilkkkkek.......skssskkvlkslkvtvvififgWflstilntv 209
                 f if + + i+++++++ y+ +i++l+   +        ++++ +++ +sl++  +if+ +W++ t++   
  MMETSP1325-20131115|7329_1 133 FAIFYVPIWIVAFATMVHYVAIIRTLRGVANMqhfagtaQQERLERLARSLSLYPLIFVASWTMITVVRVY 203
                 4566777778888889999999998776665566777779***********************99987654 PP

>> PF11710.3  G protein-coupled glucose receptor regulating Gpa2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.8   1.3e-05     0.025     125     186 ..      87     155 ..      43     162 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.3e-05
   PF11710.3 125 visvlvP..lllasLafinkregykplgawcylparpvw......yrlvlswiprylivvaivaiYisiy 186
                  + +lv+   ++a+L      + y ++gawc+++a+ ++       r+++ ++p++++ +a+++ Y++i 
  MMETSP1325-20131115|7329_1  87 KMHLLVWgsSFIAALLPLT-THNYGDAGAWCWISAEAYDsgtgtaWRFAIFYVPIWIVAFATMVHYVAII 155
                 4455554223444444444.699***********998752222227889999999999999999999885 PP

>> PF13491.1  Domain of unknown function (DUF4117)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.7   1.6e-05     0.031      48     114 ..      39     106 ..      32     115 .. 0.83
   2 ?    0.9   1.4      0.13   2.4e+02      66     106 ..     140     196 ..     107     213 .. 0.50
   3 ?   -0.6   0.1      0.36   6.9e+02      75     117 ..     194     241 ..     180     244 .. 0.56

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.6e-05
   PF13491.1  48 GrlGAwladllfslfGlsawllvllllvwglrllrrrsee.rallrllgllllllasaalaalrlasl 114
                 G lG ++  + + +f ls++++ +l+++  +r++ +++ e + l r++ + ll+  s+ +aal    +
  MMETSP1325-20131115|7329_1  39 GGLGCYVQGVAITFFDLSSVWWSFLIGYKLYRSIVKQEVEiQTLERTFKMHLLVWGSSFIAALLPLTT 106
                 789**********************************9994557788888888888888888765544 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.13
   PF13491.1  66 awllvllllvwglrllrr................rseerallrllgllllllasaal 106
                  w+++++ +v  ++++r                 +++er +  l   +l+++as+++
  MMETSP1325-20131115|7329_1 140 IWIVAFATMVHYVAIIRTlrgvanmqhfagtaqqERLERLARSLSLYPLIFVASWTM 196
                 233333333322222222444555554544443333444455555555555555555 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.36
   PF13491.1  75 vwglrllrr.....rseerallrllgllllllasaalaalrlasleat 117
                 ++ + ++r       ++ + +l +l +l+  +++ a++++  ++++++
  MMETSP1325-20131115|7329_1 194 WTMITVVRVynsiaPHHPSYWLTVLQVLFSPMSMQAVLNTVAYGMGDQ 241
                 222222222322323445668888888888888888877777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.63
# Mc/sec: 1240.02
//
Query:       MMETSP1325-20131115|7332_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 501.46
//
Query:       MMETSP1325-20131115|7334_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   12.9   0.0       0.08   12.6   0.0    1.2  1  PF11219.3 Protein of unknown function (DUF3014)


Domain annotation for each model (and alignments):
>> PF11219.3  Protein of unknown function (DUF3014)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.9e-06      0.08      94     144 ..      34      89 ..      24      90 .] 0.75

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.9e-06
   PF11219.3  94 rllaaidqllaaPepeg.pvevv..rksv..rYefadpelealsaaqKlLlRmGpe 144
                  ++ a+ +l + + +++  ++v+  r+ v  +++f +p+l +l ++ + LlR+G +
  MMETSP1325-20131115|7334_1  34 EVASALRRLAHGDLVAEeHLRVDlrRDVVlkVWHFFNPQLHQLLHSRRELLRLGAR 89 
                 56777788877776544145555546666446**********************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|7333_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-20   70.4   0.0    1.1e-19   70.1   0.0    1.1  1  PF00224.16 Pyruvate kinase, barrel domain


Domain annotation for each model (and alignments):
>> PF00224.16  Pyruvate kinase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   0.0   8.1e-24   1.1e-19       2      89 ..      65     166 ..      64     168 .] 0.90

  Alignments for each domain:
  == domain 1    score: 70.1 bits;  conditional E-value: 8.1e-24
                 --SEEEEEE--TTTSHHHHHHHHH----EEEEETT---HHHHHHHHHHHHHHHHTTTTS..............-EEEEE----------B-----SB----- CS
  PF00224.16   2 rrtkivctlGPasesvekleklieaGlnvvRlnfshGsheehkeridnvreaeeklgkk..............vaillDtkGpeiRtgllkdgkkeielkeg 89 
                 r tk+vctlGP++e++ek+ +l++aG+ v+Rlnfsh ++ + +e ++++r +  + g +               a+l+DtkGpeiRtg+l++g++  e+  g
  MMETSP1325-20131115|7333_1  65 RMTKVVCTLGPSTETQEKVGELVDAGMAVARLNFSHVHPSDYSEPLAKLRLVRSASGMHhslgrsgglvppnlRAVLVDTKGPEIRTGKLQGGAEVAEIIDG 166
                 789**********************************9999999999988887777766677888999999888*******************988777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 789.39
//
Query:       MMETSP1325-20131115|7335_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-24   86.2   5.5    1.8e-24   85.9   3.8    1.1  1  PF01529.15 DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.9   3.8   1.4e-28   1.8e-24      68     173 ..       2     106 ..       1     107 [. 0.91

  Alignments for each domain:
  == domain 1    score: 85.9 bits;  conditional E-value: 1.4e-28
  PF01529.15  68 CnkCvlkfDhHCpwvnncIGarNhkyFllfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllfllafhlylilrnmTtieeler 173
                 Cn+C++++DhHCpw+nncIGa N+k+F+lfl+y++  +++al l ++ +++   + ++ + +  +    i+l+vls++ l+f++++l+ ++y +l+++ ti++++r
  MMETSP1325-20131115|7335_1   2 CNRCIIRMDHHCPWMNNCIGALNQKHFVLFLIYTWGQCTFALTLLIVRLSECDGTVSECFPS-EDGRLAISLLVLSLLTLIFVTSMLYNQVYAVLTGIGTIDRMKR 106
                 *******************************************9999999876666665555.445556**********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 930.35
//
Query:       MMETSP1325-20131115|7336_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-17   62.8   0.3    1.1e-11   44.0   0.1    2.1  2  PF00400.27 WD domain, G-beta repeat
     0.0036   16.6   0.5       0.15   11.2   0.1    2.0  2  PF10647.4  Lipoprotein LpqB beta-propeller domain
  ------ inclusion threshold ------
      0.063   12.9   0.1        8.3    6.1   0.0    2.1  2  PF01157.13 Ribosomal protein L21e
      0.083   10.9   0.0      0.083   10.9   0.0    1.1  1  PF11715.3  Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.1   3.1e-15   1.1e-11       3      39 .]       8      44 ..       6      44 .. 0.95
   2 !   17.4   0.0   7.5e-07    0.0026       3      23 ..      50      70 ..      48      72 .] 0.88

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 3.1e-15
                EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  3 ckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 ++tl+gHt++V++va s dg++ +sgS D+t+rlWd
  MMETSP1325-20131115|7336_1  8 TIRTLKGHTGSVYSVALSADGTRALSGSGDKTLRLWD 44
                689*********************************9 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 7.5e-07
                EEEEEESSSSSEEEEEEESSS CS
  PF00400.27  3 ckatlrgHtspVtcvafspdg 23
                 ++tl+gHt++V++va s dg
  MMETSP1325-20131115|7336_1 50 TIRTLKGHTGSVYSVALSADG 70
                689**************9997 PP

>> PF10647.4  Lipoprotein LpqB beta-propeller domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.1   4.5e-05      0.15      13      53 ..      10      43 ..       3      61 .. 0.55
   2 !    4.7   0.0    0.0045        15     110     125 ..      57      72 .]      50      72 .] 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.5e-05
   PF10647.4 13 tpvpGalgrgaltvesaAvSadgqrvAavsapddrqtLyvg 53
                + ++G +g     v s+A+Sadg+r+++ s   + +tL  +
  MMETSP1325-20131115|7336_1 10 RTLKGHTG----SVYSVALSADGTRALSGS---GDKTLRLW 43
                44444444....466777777777776666...33334333 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0045
   PF10647.4 110 lsgrvtelrvSrDGtR 125
                  +g+v ++++S DGtR
  MMETSP1325-20131115|7336_1  57 HTGSVYSVALSADGTR 72 
                 3449999*******99 PP

>> PF01157.13  Ribosomal protein L21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0024       8.3      52      73 ..       8      29 ..       3      41 .. 0.82
   2 ?    5.4   0.0     0.004        14      52      72 ..      50      70 ..      44      72 .] 0.81

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0024
                --CCC------B-...TTTB-- CS
  PF01157.13 52 phkafhGktGrvvnvtkgavGv 73
                  ++ +G+tG v+ v+ +a G+
  MMETSP1325-20131115|7336_1  8 TIRTLKGHTGSVYSVALSADGT 29
                567789*********9999886 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.004
                --CCC------B-...TTTB- CS
  PF01157.13 52 phkafhGktGrvvnvtkgavG 72
                  ++ +G+tG v+ v+ +a G
  MMETSP1325-20131115|7336_1 50 TIRTLKGHTGSVYSVALSADG 70
                567789*********998877 PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   2.4e-05     0.083     237     259 ..      34      56 ..       7      71 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 2.4e-05
   PF11715.3 237 lsrDgkLRvWnletgqclrttdi 259
                  s D++LR+W+l tg  +rt   
  MMETSP1325-20131115|7336_1  34 GSGDKTLRLWDLGTGDTIRTLKG 56 
                 577**************999866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|7338_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0084   15.4  24.4     0.0086   15.4  16.9    1.0  1  PF10500.4  Nuclear RNA-splicing-associated protein
  ------ inclusion threshold ------
        1.6    6.9  25.9        1.8    6.8  18.0    1.0  1  PF10243.4  Microtubule-binding protein MIP-T3
        4.3    7.5  18.4        4.6    7.4  12.7    1.0  1  PF10199.4  Alpha and gamma adaptin binding protein p34


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4  16.9   1.9e-06    0.0086      45      97 ..      16      67 ..       2      71 .] 0.46

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.9e-06
   PF10500.4 45 srkkrekkkkkrrersssssssssssssssssssskseekrkkrkkkkkkrek 97
                   ++ek+k+k +e++s+  ssssss sss+ +s+  +++ k ++k k+k++ 
  MMETSP1325-20131115|7338_1 16 KVDEKEKEKEKEKEKTSKDESSSSSS-SSSNKRSRDDKDNDKDKDKDKDKEKD 67
                44566667777777765544443333.33333444444444444444444222 PP

>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  18.0   0.00039       1.8     147     203 ..      12      68 ..       5      71 .] 0.72

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00039
   PF10243.4 147 kekekekeKkkeeekdrekekererkkaserekkekkkdsknkkkdkekekkkeksr 203
                 +ek k  eK+ke+ek++ek ++ e+++ s++  +++++d+k+++kdk+k+k+kek++
  MMETSP1325-20131115|7338_1  12 DEKGKVDEKEKEKEKEKEKTSKDESSSSSSSSSNKRSRDDKDNDKDKDKDKDKEKDN 68 
                 677888888888888888888888888888877777777777777777777776655 PP

>> PF10199.4  Alpha and gamma adaptin binding protein p34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4  12.7     0.001       4.6      41      96 ..      16      68 ..       3      71 .] 0.50

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.001
   PF10199.4 41 eadlaeleaeeekqddsqpastepdksaaeeesasaefdddsddaisdeqneeeeg 96
                ++d++e+e+e+ek+++s+ +s+ +++s++ +     ++d+d+d+++ +++++e+++
  MMETSP1325-20131115|7338_1 16 KVDEKEKEKEKEKEKTSKDESSSSSSSSSNK---RSRDDKDNDKDKDKDKDKEKDN 68
                5677788888888888887654444433322...2233333333333333332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1753  (0.128218); expected 273.4 (0.02)
Passed bias filter:                      762  (0.0557343); expected 273.4 (0.02)
Passed Vit filter:                       215  (0.0157256); expected 13.7 (0.001)
Passed Fwd filter:                        66  (0.00482738); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.44s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 303.82
//
Query:       MMETSP1325-20131115|7339_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-06   27.7   0.0      3e-06   26.6   0.0    1.6  2  PF04542.9 Sigma-70 region 2


Domain annotation for each model (and alignments):
>> PF04542.9  Sigma-70 region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.18   2.5e+03       1      13 [.      17      29 ..      17      32 .. 0.78
   2 !   26.6   0.0   2.2e-10     3e-06      29      69 ..      32      72 ..      28      74 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.18
                HHHHHHHHHHHHH CS
   PF04542.9  1 lverylplvrrla 13
                lv ++lplv +++
  MMETSP1325-20131115|7339_1 17 LVVAHLPLVNGVV 29
                6778999998776 PP

  == domain 2    score: 26.6 bits;  conditional E-value: 2.2e-10
                ------HHHHHTTSS--HHHHHHHHHHHH---HHHHHHTS- CS
   PF04542.9 29 eaflrllraverfdpergvkfsawlltiirnaildalrrrr 69
                e+ l+l+ra+erf+ +rg++fs++++  i+  +l +l  +r
  MMETSP1325-20131115|7339_1 32 EGSLGLMRAAERFETGRGARFSTFAYMHIKSVVLKFLSEHR 72
                899***************************99999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 412.71
//
Query:       MMETSP1325-20131115|7340_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00024   20.1   0.5     0.0003   19.8   0.3    1.2  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.3   2.2e-08    0.0003       3      18 ..      55      70 ..      53      71 .] 0.91

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 2.2e-08
                ---------THHHHHH CS
                xxxxxxxxxxxxxxxx RF
  PF00443.24  3 vtGleNlGntCYmnsv 18
                ++G++NlGntCYmns+
  MMETSP1325-20131115|7340_1 55 PAGFQNLGNTCYMNST 70
                78*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 303.82
//
Query:       MMETSP1325-20131115|7341_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 564.14
//
Query:       MMETSP1325-20131115|7343_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 316.66
//
Query:       MMETSP1325-20131115|7342_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 591.75
//
Query:       MMETSP1325-20131115|7347_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   13.7   0.0      0.097   12.7   0.0    1.4  1  PF11621.3 C3 binding domain 4 of IgG-bind protein SBI
      0.093   12.1   0.3        4.4    6.7   0.0    2.2  2  PF05186.8 Dpy-30 motif


Domain annotation for each model (and alignments):
>> PF11621.3  C3 binding domain 4 of IgG-bind protein SBI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.4e-05     0.097      34      64 ..     113     143 ..     110     147 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.4e-05
   PF11621.3  34 rlaqrevnkaPmdvkkhlqkqldalvaqkda 64 
                 +l +r v+  P dv+ h+ +ql a+v   da
  MMETSP1325-20131115|7347_1 113 KLMRRVVDEQPFDVEGHFIQQLAAMVGGGDA 143
                 68899*********************99887 PP

>> PF05186.8  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0   0.00064       4.4       1      26 [.      41      66 ..      41      67 .. 0.83
   2 ?    3.4   0.0    0.0068        46       2      28 ..      99     125 ..      98     125 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00064
   PF05186.8  1 parkYLnktvaPiLlqGLtelakeRP 26
                +ar+YL++ v Pi  +  ++l  e+P
  MMETSP1325-20131115|7347_1 41 MARQYLADRVDPIMSEIINYLLLEQP 66
                79**********99887777776666 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.0068
   PF05186.8   2 arkYLnktvaPiLlqGLtelakeRPeD 28 
                 +r Y++ +v P+L + ++++  e+P D
  MMETSP1325-20131115|7347_1  99 DRLYMARKVQPVLEKLMRRVVDEQPFD 125
                 588******************999966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 1170.53
//
Query:       MMETSP1325-20131115|7348_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-20   73.0   1.3    1.8e-20   72.8   0.9    1.1  1  PF11527.3 The ARF-like 2 binding protein BART


Domain annotation for each model (and alignments):
>> PF11527.3  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.9   1.3e-24   1.8e-20       5     116 ..       3     113 ..       1     118 [. 0.94

  Alignments for each domain:
  == domain 1    score: 72.8 bits;  conditional E-value: 1.3e-24
                 HHHH---HHHHTS-HHHHHHHHHHHHHHHHTT--SS-SSTTHHHHHHHHHHHHHHHHHHHHH..-------THHHHH...SS-GGG----HHHHHHGGG-HHHHHHHHHHHHHH CS
   PF11527.3   5 eswvlesileflaspvWkapiqdFieekcivFddeeenkleyteihkeYkelvekllesfle..elgispeqfeeaclsesksknqaakkifqqllaaeDfeiFkkmMvqrnke 116
                 +++++++i ++l +p + + +++F   +c+vF+d+ enkl yt+i++e+++l+e+++e+ ++     +s+e+f e +   +++++++ ++ f++l+++ Df +Fk+ M++ + +
  MMETSP1325-20131115|7348_1   3 FDEMVGAIQDLLLDPSFVELQESFASRNCEVFEDTPENKLCYTDIFNEWQNLIESFIEKRVSeeIETFSMESFGEML---QNREDEICGDAFDMLMTLGDFGEFKELMLDFKRR 113
                 67899*********************************************************955579*********...****************************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 992.09
//
Query:       MMETSP1325-20131115|7351_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.62
# Mc/sec: 328.53
//
Query:       MMETSP1325-20131115|7352_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0026   17.3   0.6      0.014   15.0   0.0    2.4  2  PF04508.7 Viral A-type inclusion protein repeat
  ------ inclusion threshold ------
      0.058   13.5   0.3       0.07   13.3   0.2    1.1  1  PF13675.1 Type IV pili methyl-accepting chemotaxis transducer N-term
      0.092   12.8   1.3       0.16   12.0   0.4    1.7  2  PF08581.5 Tup N-terminal
        0.1   12.7   0.1       0.12   12.5   0.1    1.1  1  PF08775.5 ParB family
       0.32   10.9   1.6       0.47   10.4   0.9    1.6  1  PF09279.6 Phosphoinositide-specific phospholipase C, efhand-like


Domain annotation for each model (and alignments):
>> PF04508.7  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.1e-06     0.014       5      19 ..      37      51 ..      36      54 .. 0.91
   2 ?   -0.4   0.0      0.46   1.3e+03       9      17 ..      77      85 ..      71      85 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5.1e-06
   PF04508.7  5 rlRrkIsdLekqLsd 19
                r+R++IsdL+ qLs 
  MMETSP1325-20131115|7352_1 37 RYRTEISDLKAQLSA 51
                9************96 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.46
   PF04508.7  9 kIsdLekqL 17
                + ++Le +L
  MMETSP1325-20131115|7352_1 77 RCKELEAEL 85
                556788776 PP

>> PF13675.1  Type IV pili methyl-accepting chemotaxis transducer N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.2   2.6e-05      0.07      44     104 ..      16      75 ..       6      82 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.6e-05
   PF13675.1  44 aralleqsieefeatlaaLqrgddsrgaseevkaqlaqvealweelrplleaaast.yqeav 104
                  r++++++ +ef++tl  L + + +  + +++kaql++ e++ e + + +++  ++  ++av
  MMETSP1325-20131115|7352_1  16 QRQQMAEKTAEFATTLSGLHGRYRT--EISDLKAQLSAQEQRSEIFTATITQTMKQgLEAAV 75 
                 47999********************..89999***999999999888888887775545444 PP

>> PF08581.5  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.4   5.8e-05      0.16      32      78 ..       6      54 ..       3      55 .. 0.81
   2 ?   -1.3   0.0      0.85   2.3e+03      57      70 ..      66      79 ..      61      84 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.8e-05
   PF08581.5 32 lkiqqqiqEl..eqirqtvyeLeqahrkikekYeeeiarLkreLeargg 78
                +++ + ++E+  +q+ ++  e   + + +  +Y +ei  Lk++L a+++
  MMETSP1325-20131115|7352_1  6 HDMLHFLSEVqrQQMAEKTAEFATTLSGLHGRYRTEISDLKAQLSAQEQ 54
                5555566666225899999999**********************99875 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.85
   PF08581.5 57 kikekYeeeiarLk 70
                ++k+  e+ ++r k
  MMETSP1325-20131115|7352_1 66 TMKQGLEAAVTRCK 79
                56776666666655 PP

>> PF08775.5  ParB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   4.3e-05      0.12      18      72 ..      20      75 ..       5      83 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.3e-05
   PF08775.5 18 vseelekkklsldelvekvkeeikdieselsedeakkeilk.likkelkalkekkk 72
                ++e+ ++  ++l+ l    + ei+d++++ls +e+++ei + +i++ +k+  e+ +
  MMETSP1325-20131115|7352_1 20 MAEKTAEFATTLSGLHGRYRTEISDLKAQLSAQEQRSEIFTaTITQTMKQGLEAAV 75
                34455555668999999999*******************86369999988666555 PP

>> PF09279.6  Phosphoinositide-specific phospholipase C, efhand-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.9   0.00017      0.47      16      37 ..       3      24 ..       1      55 [. 0.76

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00017
                EEHHHHHHHHHHTS--TT---H CS
   PF09279.6 16 ltaeeLrrFLneeQkeerltee 37
                l+++++ +FL e+Q+++ ++++
  MMETSP1325-20131115|7352_1  3 LQEHDMLHFLSEVQRQQMAEKT 24
                7899************988432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       826  (0.0604154); expected 273.4 (0.02)
Passed bias filter:                      634  (0.0463721); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 438.48
//
Query:       MMETSP1325-20131115|7350_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.3   3.7      0.023   14.4   2.6    1.5  1  PF14014.1 Protein of unknown function (DUF4230)
        2.1    6.9  13.6       0.58    8.8   7.4    1.5  2  PF05917.6 Helicobacter pylori protein of unknown function (DUF874)
        9.3    5.6   8.5        1.1    8.7   1.6    2.0  2  PF04156.9 IncA protein


Domain annotation for each model (and alignments):
>> PF14014.1  Protein of unknown function (DUF4230)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   2.6   5.1e-06     0.023      57     144 ..      51     139 ..      48     153 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5.1e-06
   PF14014.1  57 lkeedvqvdedgktititLPppeilsvelDekkikvydeksgllnr.iepe.dlaeaqkeakekvekaalesglleqAeknakkaleqll 144
                 +++++ +v++d+k ++   P+++i  ++lD + i+   ++   +++  + + +++e q+ ak++++++a++++  e Ae ++++ l + l
  MMETSP1325-20131115|7350_1  51 VDQRWKNVEDDEKAVENSAPKAKIVGIKLD-GPIDTTGKDAATVRAmQDRQrEMQERQAAAKAELKAQANAKKAEEAAEMELRERLDGKL 139
                 6677788999********************.66888777777665533333366666666666666666666666666666665555544 PP

>> PF05917.6  Helicobacter pylori protein of unknown function (DUF874)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   7.4   0.00013      0.58     122     204 ..      52     128 ..      29     144 .. 0.88
   2 ?   -2.9   0.0      0.44     2e+03      12      30 ..     183     201 ..     178     217 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00013
   PF05917.6 122 dtdkkieleqekkeaenardranksgieleqekqkteksgielansqikaeqekqkteqekqketksaikleqekqktinekr 204
                 d+  k ++e+++k  en+  +a   gi+l+   + t k+      + ++a q++q+  qe+q ++k+++k + + +k+++  +
  MMETSP1325-20131115|7350_1  52 DQRWK-NVEDDEKAVENSAPKAKIVGIKLDGPIDTTGKD-----AATVRAMQDRQREMQERQAAAKAELKAQANAKKAEEAAE 128
                 45555.899***********************9999998.....6789**********************9999999887655 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 0.44
   PF05917.6  12 vgknvelattkakkektak 30 
                 v k+++la++k++  +t k
  MMETSP1325-20131115|7350_1 183 VKKKTMLAKMKTHPDRTSK 201
                 6777888888777666665 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.3     0.083   3.8e+02     126     150 ..      25      49 ..      18      71 .. 0.69
   2 ?    8.7   1.6   0.00023       1.1      94     142 ..      97     149 ..      88     162 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.083
   PF04156.9 126 ksleerlesleesikelakeirelr 150
                 +++e+r+ +l+e++++++++ +   
  MMETSP1325-20131115|7350_1  25 TAEEKRMAALKEKYAKANEKKKVWD 49 
                 6789999999999999888755444 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00023
   PF04156.9  94 eeeleqleerlaeleseledleedlellq....eelksleerlesleesikel 142
                 ++   +++er+a+ ++el+++ ++++ ++    e++++l  +l++++e++ ++
  MMETSP1325-20131115|7350_1  97 QDRQREMQERQAAAKAELKAQANAKKAEEaaemELRERLDGKLKAWSEEYGKK 149
                 4444689**********************888888888888888888888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1568  (0.114687); expected 273.4 (0.02)
Passed bias filter:                      611  (0.0446899); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.39s 00:00:01.01 Elapsed: 00:00:00.51
# Mc/sec: 1080.71
//
Query:       MMETSP1325-20131115|7353_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.5    8.0   7.2        1.8    7.8   5.0    1.1  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   5.0   0.00013       1.8      63      81 ..      23      41 ..      19      58 .. 0.70

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00013
   PF10500.4 63 sssssssssssssssssks 81
                  ssssss+sss ss++++
  MMETSP1325-20131115|7353_1 23 AMSSSSSSTSSSASSNNAA 41
                4566777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.54
# Mc/sec: 412.71
//
Query:       MMETSP1325-20131115|7354_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-11   43.3   6.6    3.2e-11   43.0   4.6    1.0  1  PF03798.11 TLC domain
  ------ inclusion threshold ------
        0.4    9.3   5.9       0.14   10.8   2.2    1.6  2  PF01080.12 Presenilin


Domain annotation for each model (and alignments):
>> PF03798.11  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   4.6   4.7e-15   3.2e-11      50     197 ..      18     163 ..       5     164 .. 0.83

  Alignments for each domain:
  == domain 1    score: 43.0 bits;  conditional E-value: 4.7e-15
  PF03798.11  50 lfalgYflydllvlllyekkrk....dfalmvlHHvitlfllllsyvrglgryglavlllhelstpflslrkilkylrgksklskdllfngvlfllsFfvcRlvlfpylillsyldvasisveaaplvlpviclilllvLqllnlyWfyliv 197
                  + +gY l+d++++++   +++    d  ++++HH++ l+ +++++ +  +  + +  +++e++ p+l lr  + ++ ++  +   + +ng++ l+s+ v+R+  + +l  +s+++ a + +  +pl++ ++++ ++    +l+++W ++i+
  MMETSP1325-20131115|7354_1  18 SVFMGYILSDVVFVTVAILMKGkfegDDGGFMVHHLAILVTWYMALTKRSCFGFCIGPMMCEVTQPLLGLRYYMAKY-KY-FG-PIFTVNGLAILVSWWVFRVGGYVLLQGRSVFNSAGLMMD-DPLRVLMVVNWGIGG--VLQVFWGAKIL 163
                 6789******9999999999997777559*************9999877666666667999****************.65.33.457788*************************99986666.466666666666665..89****99997 PP

>> PF01080.12  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.11   7.5e+02     375     390 ..      10      25 ..       3      40 .. 0.65
   2 ?   10.8   2.2     2e-05      0.14      87     150 ..      91     162 ..      57     171 .. 0.71

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.11
  PF01080.12 375 kalPALPlsiiiglif 390
                 ++   LP+s+++g i+
  MMETSP1325-20131115|7354_1  10 QTKAILPMSVFMGYIL 25 
                 5555688888888875 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 2e-05
  PF01080.12  87 ykfykiikawlilsslllLflfsvlyl......e..evlkavnvavdvvlvlllivnfGvvGivaihwkgpl 150
                 +  yk      +++ l +L  + v+ +      +   v+++  + +d +l +l++vn+G++G++ ++w +++
  MMETSP1325-20131115|7354_1  91 MAKYKYFGPIFTVNGLAILVSWWVFRVggyvllQgrSVFNSAGLMMDDPLRVLMVVNWGIGGVLQVFWGAKI 162
                 4455555555666666666544444331111112226888888*************************7765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 937.70
//
Query:       MMETSP1325-20131115|7357_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 435.26
//
Query:       MMETSP1325-20131115|7356_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       535  (0.0391311); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 474.28
//
Query:       MMETSP1325-20131115|7359_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-18   65.3   0.0    1.7e-08   34.5   0.0    2.0  2  PF13637.1  Ankyrin repeats (many copies)
    2.4e-16   58.4   0.6    1.7e-11   43.2   0.0    3.0  3  PF00023.25 Ankyrin repeat
    9.1e-16   57.8   0.0      1e-15   57.6   0.0    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
      4e-14   51.1   0.0    3.2e-10   39.1   0.0    3.0  3  PF13606.1  Ankyrin repeat
    4.4e-11   42.5   0.0    5.1e-11   42.3   0.0    1.0  1  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.034   13.5   0.2          2    7.9   0.0    2.0  2  PF01316.16 Arginine repressor, DNA binding domain
      0.095   12.4   2.2        1.3    8.8   0.2    2.1  2  PF00627.26 UBA/TS-N domain
       0.11   12.6   0.1       0.23   11.6   0.0    1.5  2  PF14001.1  YdfZ protein


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   1.7e-11   2.9e-08      17      54 .]       1      38 [.       1      38 [. 0.98
   2 !   34.5   0.0     1e-11   1.7e-08       1      39 [.      18      56 ..      18      57 .. 0.96

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 1.7e-11
   PF13637.1 17 vklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                v+ Lle g+++n+  e+G+t+L  Aa++g++e+++ Ll
  MMETSP1325-20131115|7359_1  1 VRALLEAGASVNQAKEDGRTPLFMAAQNGHVEVVRALL 38
                799*********************************98 PP

  == domain 2    score: 34.5 bits;  conditional E-value: 1e-11
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLh 39
                g+t+L++aa+ g++e+v+ Lle g+++n+  e+G+t+L 
  MMETSP1325-20131115|7359_1 18 GRTPLFMAAQNGHVEVVRALLEAGASVNQAKEDGRTPLF 56
                69***********************************95 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00048      0.83      18      30 ..       1      13 [.       1      14 [. 0.91
   2 !   43.2   0.0   9.9e-15   1.7e-11       1      30 [.      17      46 ..      17      47 .. 0.97
   3 ?    3.2   0.0     0.045        77       1       7 [.      50      56 ..      50      57 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00048
                HHHHHHTTSSTTH CS
  PF00023.25 18 vklLlsqGAdlna 30
                v+ Ll++GA++n 
  MMETSP1325-20131115|7359_1  1 VRALLEAGASVNQ 13
                799********96 PP

  == domain 2    score: 43.2 bits;  conditional E-value: 9.9e-15
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlna 30
                dG+TPL +Aa++g++evv+ Ll++GA++n 
  MMETSP1325-20131115|7359_1 17 DGRTPLFMAAQNGHVEVVRALLEAGASVNQ 46
                8***************************96 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.045
                TSCBHHH CS
  PF00023.25  1 dGfTPLH 7 
                dG+TPL 
  MMETSP1325-20131115|7359_1 50 DGRTPLF 56
                8****95 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.0   6.1e-19     1e-15      13      64 ..       1      56 [.       1      58 [] 0.95

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 6.1e-19
   PF12796.2 13 vklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLh 64
                v+ Lle+ga+v+     g+tpL+ Aa++g++e+v++Lleaga+vn+ +++g+tpL+
  MMETSP1325-20131115|7359_1  1 VRALLEAGASVNQakedGRTPLFMAAQNGHVEVVRALLEAGASVNQAKEDGRTPLF 56
                789***********999999**********************************97 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0059        10      18      29 ..       1      12 [.       1      13 [. 0.92
   2 !   39.1   0.0   1.9e-13   3.2e-10       1      29 [.      17      45 ..      17      46 .. 0.97
   3 ?    2.5   0.0      0.12     2e+02       1       8 [.      50      57 ..      50      58 .] 0.88

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0059
   PF13606.1 18 veaLlengadin 29
                v+aLle+ga +n
  MMETSP1325-20131115|7359_1  1 VRALLEAGASVN 12
                79********99 PP

  == domain 2    score: 39.1 bits;  conditional E-value: 1.9e-13
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +G+TpL++Aa+ng++e+v+aLle+ga +n
  MMETSP1325-20131115|7359_1 17 DGRTPLFMAAQNGHVEVVRALLEAGASVN 45
                79*************************99 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.12
   PF13606.1  1 nGnTpLhl 8 
                +G+TpL++
  MMETSP1325-20131115|7359_1 50 DGRTPLFM 57
                79****86 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   0.0     3e-14   5.1e-11       1      53 [.       4      55 ..       4      57 .. 0.95

  Alignments for each domain:
  == domain 1    score: 42.3 bits;  conditional E-value: 3e-14
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53
                Lle+g a+vn+  e g+tpL +Aa +g++evvr Ll++ga+ n   +dg+t+l
  MMETSP1325-20131115|7359_1  4 LLEAG-ASVNQAKEDGRTPLFMAAQNGHVEVVRALLEAGASVNQAKEDGRTPL 55
                9****.99999999999***********************************9 PP

>> PF01316.16  Arginine repressor, DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.019        33      26      40 ..       1      15 [.       1      15 [. 0.89
   2 ?    7.9   0.0    0.0012         2      23      40 ..      31      48 ..      25      48 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.019
                HHHHHC------HHH CS
  PF01316.16 26 vaeLkeeGinvtQat 40
                v +L e+G  v+Qa+
  MMETSP1325-20131115|7359_1  1 VRALLEAGASVNQAK 15
                5789*********96 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0012
                HHHHHHHHC------HHH CS
  PF01316.16 23 eelvaeLkeeGinvtQat 40
                 e+v +L e+G  v+Qa+
  MMETSP1325-20131115|7359_1 31 VEVVRALLEAGASVNQAK 48
                599*************96 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.023        39      20      34 ..       1      15 [.       1      17 [. 0.71
   2 ?    8.8   0.2   0.00078       1.3      17      35 ..      31      49 ..      24      50 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.023
                HHHHHHTTTSHHHHH CS
  PF00627.26 20 kkALratnnnvErAv 34
                ++AL +++ +v++A 
  MMETSP1325-20131115|7359_1  1 VRALLEAGASVNQAK 15
                578888888888775 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00078
                HHHHHHHHHTTTSHHHHHH CS
  PF00627.26 17 eeakkALratnnnvErAve 35
                 e+++AL +++ +v++A e
  MMETSP1325-20131115|7359_1 31 VEVVRALLEAGASVNQAKE 49
                699***********99965 PP

>> PF14001.1  YdfZ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         2   3.4e+03       9      19 ..       4      14 ..       2      21 .. 0.59
   2 ?   11.6   0.0   0.00014      0.23      17      42 ..      24      49 ..      18      53 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 2
   PF14001.1  9 aittGsrVMia 19
                 +++G  V +a
  MMETSP1325-20131115|7359_1  4 LLEAGASVNQA 14
                55666666554 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00014
   PF14001.1 17 MiagtgevgvikaihadgltaeQirr 42
                M a++g+v+v++a    g + +Q++ 
  MMETSP1325-20131115|7359_1 24 MAAQNGHVEVVRALLEAGASVNQAKE 49
                99*********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.61
# Mc/sec: 227.85
//
Query:       MMETSP1325-20131115|7361_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|7362_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.047   13.4   0.3      0.062   13.0   0.2    1.3  1  PF14131.1  Domain of unknown function (DUF4298)
      0.098   12.3   0.0       0.12   12.1   0.0    1.2  1  PF00849.17 RNA pseudouridylate synthase


Domain annotation for each model (and alignments):
>> PF14131.1  Domain of unknown function (DUF4298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   9.1e-06     0.062      43      73 ..      45      75 ..      16      84 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 9.1e-06
   PF14131.1 43 eewmedleasekgeiptelkygvLSEDalyn 73
                eew +dl a+e+ ++ ++   ++L+ D ++ 
  MMETSP1325-20131115|7362_1 45 EEWANDLSAQEEAQLFNNDRTWILTNDGIWP 75
                79****************************5 PP

>> PF00849.17  RNA pseudouridylate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.7e-05      0.12      48      72 ..      28      52 ..       8      61 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.7e-05
  PF00849.17 48 DkatsGllllAksseaanklakafe 72
                D+ t+Gll+lA ++ea +++a+ ++
  MMETSP1325-20131115|7362_1 28 DRMTQGLLILAETREAFEEWANDLS 52
                99****************9999764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 434.06
//
Query:       MMETSP1325-20131115|7363_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.28s 00:00:00.57 Elapsed: 00:00:00.42
# Mc/sec: 188.29
//
Query:       MMETSP1325-20131115|7360_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-40  137.9   0.0    2.3e-39  135.2   0.0    1.9  2  PF03224.9  V-ATPase subunit H
    2.9e-37  127.1   0.4    7.1e-37  125.8   0.3    1.7  1  PF11698.3  V-ATPase subunit H
    5.6e-09   36.0   0.1     0.0019   18.3   0.0    3.4  4  PF13646.1  HEAT repeats
    2.4e-08   33.3   1.8      0.015   14.9   0.0    5.1  5  PF00514.18 Armadillo/beta-catenin-like repeat
    2.6e-05   24.5   3.0      0.038   14.4   0.0    4.2  4  PF13513.1  HEAT-like repeat
     0.0076   16.1   4.1        1.5    8.9   0.0    4.1  5  PF02985.17 HEAT repeat
  ------ inclusion threshold ------
      0.015   14.3   0.0      0.027   13.4   0.0    1.4  1  PF04826.8  Armadillo-like
       0.02   13.1   0.0        2.2    6.3   0.0    2.7  2  PF01602.15 Adaptin N terminal region
      0.024   14.0   0.1        0.2   10.9   0.0    2.3  2  PF13251.1  Domain of unknown function (DUF4042)
      0.067   12.8   0.3       0.23   11.1   0.2    1.9  1  PF14217.1  Domain of unknown function (DUF4327)


Domain annotation for each model (and alignments):
>> PF03224.9  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.2   0.0   1.7e-42   2.3e-39     108     312 .]       4     199 ..       3     199 .. 0.92
   2 ?    0.4   0.0      0.18   2.5e+02     147     178 ..     246     315 ..     227     319 .. 0.47

  Alignments for each domain:
  == domain 1    score: 135.2 bits;  conditional E-value: 1.7e-42
   PF03224.9 108 kpflkllnrqddfivllalrilakllseskkksnklveeaLkrllsllksqlssssnevi..eiavrllqellrvkeyRelfveadgvstlisilrsevasssrvglQlqYqvllclWlLsFekeiaeelvkkklipllvdilkdsakEKvtRvilatlrNllekaekslievmvqvkllklleiLeerkfsDeditedleylkeeL 312
                 +pfl+++++ d + ++ a+  la+ll++ + +++         ++s+l++ql++s n+      av +l  llr++e R lf ++ g+  l ++l     +   ++ Ql+Y++ +clW LsF +e+  +++++ +i  l++ +  + +EKv+Rv+la lrNl+e +++ +  ++++++l+k+l+++ er++ D+d+ ed+e +++ L
  MMETSP1325-20131115|7360_1   4 NPFLQIMRQGDPYCQRAASTSLARLLITFDSSMES--------FVSWLCEQLTNSRNNNLamRAAVYALTILLRREEARLLFGQHGGIGYLTKLL---KMQGAGANAQLLYELTFCLWTLSFCEEVKYNFLEQGTIAVLCEQVTAAPREKVVRVSLAALRNLCEGEADVYNTAIIGCGLPKTLKNMRERQWADPDVAEDVEAVYSAL 199
                 69*****999******************8888887........899999966664443322499*******************************...445688*************************************************************************************************999876 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.18
   PF03224.9 147 aLkrllsllksqlss......................................ssnevieiavrllqell 178
                 +Lk l++llks  ++                                      +++ev+  a++++++++
  MMETSP1325-20131115|7360_1 246 LLKALIELLKSDENEvvsvacydlgewvrffpngksivknlgakdlvmakiedPDAEVQRHALQCMSKIM 315
                 3344444444433333334444444444444444444444444444444444466777777777776655 PP

>> PF11698.3  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.8   0.3   5.2e-40   7.1e-37       2     119 .]     205     320 ..     204     320 .. 0.98

  Alignments for each domain:
  == domain 1    score: 125.8 bits;  conditional E-value: 5.2e-40
   PF11698.3   2 kltsfdeYvaElksgkLewspvHksekFWkenakkfeedefkllkkLielleksedkttlavacnDigefvrlypegknileklkvkervmellshedeevrkeALlavqkllvqnwe 119
                 +l++f++++aE++ ++L++  vH+ ekFW+enak++e ++f+llk+Liell ks+++ +++vac+D+ge vr+ p+gk+i+++l++k+ vm  ++++d+ev+++AL++++k++vq+we
  MMETSP1325-20131115|7360_1 205 ELSTFERWAAEVNGKNLKFGLVHS-EKFWRENAKELEANDFALLKALIELL-KSDENEVVSVACYDLGEWVRFFPNGKSIVKNLGAKDLVMAKIEDPDAEVQRHALQCMSKIMVQQWE 320
                 79**********************.**************************.7888999**********************************************************6 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   8.8e-05      0.12      36      87 ..       6      64 ..       4      65 .. 0.79
   2 ?    0.5   0.0      0.47   6.5e+02       4      32 ..     131     159 ..     122     207 .. 0.56
   3 !    8.5   0.0    0.0015       2.1      31      56 ..     245     270 ..     233     281 .. 0.76
   4 !   18.3   0.0   1.4e-06    0.0019       1      58 [.     247     314 ..     247     318 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 8.8e-05
   PF13646.1 36 LlelLkdsdpevRraAaeaLgkl.....gd.pealpaLlkllddded.avvreaaaeaL 87
                 l+ ++  dp+ +raA  +L++l     ++ ++ +++L++ l+++ +     +aa++aL
  MMETSP1325-20131115|7360_1  6 FLQIMRQGDPYCQRAASTSLARLlitfdSSmESFVSWLCEQLTNSRNnNLAMRAAVYAL 64
                57889999**************988887443677**********954144446679988 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.47
   PF13646.1   4 LlaaLekdpdpevraaaieaLgqlgseea 32 
                 L+++++  p ++v +  + aL +l + ea
  MMETSP1325-20131115|7360_1 131 LCEQVTAAPREKVVRVSLAALRNLCEGEA 159
                 44555445555555555555554444333 PP

  == domain 3    score: 8.5 bits;  conditional E-value: 0.0015
   PF13646.1  31 ealpaLlelLkdsdpevRraAaeaLg 56 
                 ++l+aL+elLk+++ ev   A++ Lg
  MMETSP1325-20131115|7360_1 245 ALLKALIELLKSDENEVVSVACYDLG 270
                 45788888888777777777777666 PP

  == domain 4    score: 18.3 bits;  conditional E-value: 1.4e-06
   PF13646.1   1 leaLlaaLekdpdpevraaaieaLg...........qlgseealpaLlelLkdsdpevRraAaeaLgkl 58 
                 l+aL+++L k+ ++ev   a++ Lg             ++  a +++ + ++d+d+ev+r A+++++k+
  MMETSP1325-20131115|7360_1 247 LKALIELL-KSDENEVVSVACYDLGewvrffpngksIVKNLGAKDLVMAKIEDPDAEVQRHALQCMSKI 314
                 689***99.88889***********999999999876788899**********************9987 PP

>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.63   8.6e+02      16      38 ..       5      27 ..       4      29 .. 0.85
   2 ?    0.2   0.0      0.47   6.4e+02      10      22 ..      79      91 ..      71     102 .. 0.83
   3 !   14.9   0.0   1.1e-05     0.015      10      40 ..     124     155 ..     118     156 .. 0.95
   4 !    9.1   0.0   0.00077       1.1      14      33 ..     247     266 ..     244     267 .. 0.94
   5 ?    2.1   0.0      0.12   1.7e+02      23      37 ..     298     312 ..     291     315 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.63
                HHHHHHC-SSHHHHHHHHHHHHH CS
  PF00514.18 16 pLvqLLksgdeevqeeAawALsN 38
                p++q ++ gd+  q++A + L  
  MMETSP1325-20131115|7360_1  5 PFLQIMRQGDPYCQRAASTSLAR 27
                7899999**********988865 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.47
                HCHHHHHHHHHHC CS
  PF00514.18 10 eaGavppLvqLLk 22
                ++G++  L +LLk
  MMETSP1325-20131115|7360_1 79 QHGGIGYLTKLLK 91
                89*********98 PP

  == domain 3    score: 14.9 bits;  conditional E-value: 1.1e-05
                 HCHHHHHHHHHHC.-SSHHHHHHHHHHHHHHH CS
  PF00514.18  10 eaGavppLvqLLk.sgdeevqeeAawALsNLa 40 
                 e+G + +L++  +  + e+v++++++AL+NL+
  MMETSP1325-20131115|7360_1 124 EQGTIAVLCEQVTaAPREKVVRVSLAALRNLC 155
                 7899***************************9 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.00077
                 HHHHHHHHC-SSHHHHHHHH CS
  PF00514.18  14 vppLvqLLksgdeevqeeAa 33 
                 +++L++LLks+  ev+ +A+
  MMETSP1325-20131115|7360_1 247 LKALIELLKSDENEVVSVAC 266
                 789****************9 PP

  == domain 5    score: 2.1 bits;  conditional E-value: 0.12
                 -SSHHHHHHHHHHHH CS
  PF00514.18  23 sgdeevqeeAawALs 37 
                 ++d evq+ A+ ++s
  MMETSP1325-20131115|7360_1 298 DPDAEVQRHALQCMS 312
                 89********99887 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.017        23       4      53 ..      18      65 ..      12      67 .. 0.75
   2 ?   -1.8   0.0       3.4   4.7e+03       9      20 ..     145     160 ..     137     168 .. 0.51
   3 !   14.4   0.0   2.8e-05     0.038      28      55 .]     245     272 ..     233     272 .. 0.89
   4 ?    1.8   0.0      0.26   3.5e+02      30      55 .]     293     314 ..     282     314 .. 0.70

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.017
   PF13513.1  4 RraAawaLGrlaggeprllepavpellpaLlelLedddd.eV.ReaAawALg 53
                +raA   L+rl+   +  +e      + +L+e L+++++     +aA++AL+
  MMETSP1325-20131115|7360_1 18 QRAASTSLARLLITFDSSME----SFVSWLCEQLTNSRNnNLaMRAAVYALT 65
                66777777775545555555....8999******998888555******996 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 3.4
   PF13513.1   9 w.aLGr...laggepr 20 
                 +  L++   l++ge++
  MMETSP1325-20131115|7360_1 145 RvSLAAlrnLCEGEAD 160
                 4444442234555544 PP

  == domain 3    score: 14.4 bits;  conditional E-value: 2.8e-05
   PF13513.1  28 ellpaLlelLeddddeVReaAawALgrl 55 
                 +ll+aL+elL++d++eV   A++ Lg++
  MMETSP1325-20131115|7360_1 245 ALLKALIELLKSDENEVVSVACYDLGEW 272
                 79***********************986 PP

  == domain 4    score: 1.8 bits;  conditional E-value: 0.26
   PF13513.1  30 lpaLlelLeddddeVReaAawALgrl 55 
                 +++     ed+d+eV++ A+ + +++
  MMETSP1325-20131115|7360_1 293 MAKI----EDPDAEVQRHALQCMSKI 314
                 4444....45555**99998887775 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       6.2   8.5e+03      14      27 ..      15      28 ..       7      29 .. 0.76
   2 ?   -2.8   0.0       6.5   8.9e+03      19      27 ..      59      67 ..      58      69 .. 0.78
   3 ?   -0.6   0.0       1.3   1.8e+03      15      29 ..     142     156 ..     139     157 .. 0.76
   4 ?    5.4   0.0     0.015        20       1      22 [.     246     267 ..     246     274 .. 0.88
   5 !    8.9   0.0    0.0011       1.5       9      28 ..     296     315 ..     290     317 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 6.2
                HHHHHHHHHHHHHH CS
  PF02985.17 14 peVReaAaeaLgal 27
                p   +aA ++L++l
  MMETSP1325-20131115|7360_1 15 PYCQRAASTSLARL 28
                55567888888877 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 6.5
                HHHHHHHHH CS
  PF02985.17 19 aAaeaLgal 27
                aA++aL+ l
  MMETSP1325-20131115|7360_1 59 AAVYALTIL 67
                899999866 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHH CS
  PF02985.17  15 eVReaAaeaLgalae 29 
                 +V + ++ aL +l+e
  MMETSP1325-20131115|7360_1 142 KVVRVSLAALRNLCE 156
                 677778888888887 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.015
                 HHHHHHHHHTSSSHHHHHHHHH CS
  PF02985.17   1 llPlllkllnDpspeVReaAae 22 
                 ll +l++ll++++ eV + A++
  MMETSP1325-20131115|7360_1 246 LLKALIELLKSDENEVVSVACY 267
                 7899******999999999885 PP

  == domain 5    score: 8.9 bits;  conditional E-value: 0.0011
                 HTSSSHHHHHHHHHHHHHHH CS
  PF02985.17   9 lnDpspeVReaAaeaLgala 28 
                 ++Dp++eV + A+++++ ++
  MMETSP1325-20131115|7360_1 296 IEDPDAEVQRHALQCMSKIM 315
                 68*************99885 PP

>> PF04826.8  Armadillo-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0     2e-05     0.027       9      81 ..     239     314 ..     233     320 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2e-05
   PF04826.8   9 Lepeel...ekllallestedpliqeialitlgnsa.aysfnqdiirelggipiianllsksnpevkekalnalnnl 81 
                 Le++++   + l++ll+s e   +  +a   lg     ++  + i+++lg   ++ ++++++++ev+++al+ +  +
  MMETSP1325-20131115|7360_1 239 LEANDFallKALIELLKSDE-NEVVSVACYDLGEWVrFFPNGKSIVKNLGAKDLVMAKIEDPDAEVQRHALQCMSKI 314
                 66666511156666666555.556679999999865157999*****************************998765 PP

>> PF01602.15  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0016       2.2     381     434 ..       8      62 ..       4      93 .. 0.54
   2 ?    2.0   0.0     0.033        45     375     416 ..     246     286 ..     236     311 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0016
  PF01602.15 381 ellslsgeyvkdeivevirdiiqkvpelhekivekLaellekiespe.araaaiW 434
                 ++++  + y ++++  ++ +++++++++ e+ v+ L+e l++ ++++ a +aa++
  MMETSP1325-20131115|7360_1   8 QIMRQGDPYCQRAASTSLARLLITFDSSMESFVSWLCEQLTNSRNNNlAMRAAVY 62 
                 4444444444444444444444444444444444444444443333322333333 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.033
  PF01602.15 375 vldvllellslsgeyvkdeivevirdiiqkvpelhekivekL 416
                  l+ l+ell+++++ v++ +++++ + ++ +p+  ++iv++L
  MMETSP1325-20131115|7360_1 246 LLKALIELLKSDENEVVSVACYDLGEWVRFFPNG-KSIVKNL 286
                 4667777888777778777777777777777774.5566666 PP

>> PF13251.1  Domain of unknown function (DUF4042)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       0.3   4.1e+02     122     165 ..     105     150 ..      87     165 .. 0.62
   2 ?   10.9   0.0   0.00015       0.2      24      74 ..     270     321 ..     247     323 .] 0.92

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.3
   PF13251.1 122 llkcLavl..vsatpyerlkkglltevvksvkkllkekdtevkvsa 165
                 l  cL  l   +  +y+ l++g +  + ++v +  +ek + v  +a
  MMETSP1325-20131115|7360_1 105 LTFCLWTLsfCEEVKYNFLEQGTIAVLCEQVTAAPREKVVRVSLAA 150
                 4444433211566777777777777777777776666555554444 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00015
   PF13251.1  24 gyWhvllPds.vlqerkkeatLltillkDpspkvRaaalqvlaalLegsksf 74 
                 g W  ++P+  +  ++  ++ L++  ++Dp   v   alq +++++ ++ +f
  MMETSP1325-20131115|7360_1 270 GEWVRFFPNGkSIVKNLGAKDLVMAKIEDPDAEVQRHALQCMSKIMVQQWEF 321
                 89********9899999999*************************9887666 PP

>> PF14217.1  Domain of unknown function (DUF4327)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   0.00017      0.23      37      64 ..     231     258 ..     225     260 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00017
   PF14217.1  37 eWsavekeLerndfllrDriidLlgvEe 64 
                  W    keLe ndf l   +i+Ll+++e
  MMETSP1325-20131115|7360_1 231 FWRENAKELEANDFALLKALIELLKSDE 258
                 59999*******************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.69u 0.42s 00:00:01.10 Elapsed: 00:00:00.53
# Mc/sec: 1460.42
//
Query:       MMETSP1325-20131115|7364_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       706  (0.0516384); expected 273.4 (0.02)
Passed bias filter:                      488  (0.0356934); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 823.10
//
Query:       MMETSP1325-20131115|7365_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-11   41.7   0.0    7.2e-11   41.5   0.0    1.0  1  PF00884.18 Sulfatase
  ------ inclusion threshold ------
      0.043   13.0   0.1      0.045   12.9   0.1    1.4  1  PF01663.17 Type I phosphodiesterase / nucleotide pyrophosphatase


Domain annotation for each model (and alignments):
>> PF00884.18  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   1.1e-14   7.2e-11     150     243 ..       6     130 ..       2     132 .] 0.91

  Alignments for each domain:
  == domain 1    score: 41.5 bits;  conditional E-value: 1.1e-14
                 GSHHHHHHHHHHHHH.HHCT.TSSEEEEEE--TTSSS----TTTTTSS-GGGS...................................HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEE CS
  PF00884.18 150 gysdealldealefl.larn.dkPfflylatlgpHappyapdeyaekyatffddgeeka.............................rqleaylnsveyvDdaigrvlaaLeenglldnTlvvf 243
                   sd   +d a+++l    + +k f+l + ++ pH p+ a +e+ + y+  + +  + +                              +++ay+++ + +D+ igr+l+aL+ +g++dnT +++
  MMETSP1325-20131115|7365_1   6 DLSDVLTTDHAIGLLkTGVDsGKAFYLAVGYHKPHLPWIAKQEFFDLYPVDNISVAKVKtldasipaiafndndsespweplddhsarIARRAYYAATSGMDHEIGRLLDALDASGVADNTAILL 130
                 5688899*********99999***********************999998887777776889999999999999*************9999******************************9986 PP

>> PF01663.17  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   6.6e-06     0.045     210     240 ..     102     132 .]      20     132 .] 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.6e-06
                 HHHHHHHH--------TTTT-CCCEEEEEE- CS
  PF01663.17 210 alrrvDraigqLlealdergllentniilvS 240
                 a +  D+ ig+Ll+ald  g+++nt+i+l S
  MMETSP1325-20131115|7365_1 102 ATSGMDHEIGRLLDALDASGVADNTAILLHS 132
                 77889**********************9966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 632.64
//
Query:       MMETSP1325-20131115|7367_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 217.03
//
Query:       MMETSP1325-20131115|7368_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.03   13.7   0.0       0.81    9.1   0.0    2.1  2  PF13327.1 Type III secretion system subunit


Domain annotation for each model (and alignments):
>> PF13327.1  Type III secretion system subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   5.9e-05      0.81      13      36 ..      34      57 ..      27      65 .. 0.84
   2 ?    2.9   0.0    0.0046        63      18      38 ..      67      87 ..      63      89 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 5.9e-05
   PF13327.1 13 kiahpeWlaalglnaeqsrYgrsp 36
                   hp Wl+alg+++ +++Y ++ 
  MMETSP1325-20131115|7368_1 34 VATHPIWLEALGIKKPKAEYTEEA 57
                567*****************9875 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.0046
   PF13327.1 18 eWlaalglnaeqsrYgrspel 38
                 +++ +g++ +++ Y +s e+
  MMETSP1325-20131115|7368_1 67 DYFETVGFERWNKIYSDSDEV 87
                68999***********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 422.89
//
Query:       MMETSP1325-20131115|7369_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.087   11.4   0.1      0.095   11.3   0.1    1.1  1  PF12777.2  Microtubule-binding stalk of dynein motor
       0.16   11.3   0.5       0.21   10.9   0.3    1.3  1  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   1.4e-05     0.095     216     259 ..       4      46 ..       2      64 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.4e-05
   PF12777.2 216 vepkrqalekanaelaaaqeklaaikakiaelnanlaeltarfe 259
                 v  kr ale a+a++++ ++ +aa+ ak  +l+ nl+e  ar+ 
  MMETSP1325-20131115|7369_1   4 VRAKREALEAAKANIEKLRKEVAALEAKPGHLD-NLSEEHARYL 46 
                 789*****************************7.8998888875 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   3.1e-05      0.21      19      50 ..       4      35 ..       1      48 [. 0.76

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.1e-05
  PF04977.10 19 lyqlkqeiaalqaelaklkaeneeLeaevkdL 50
                ++++++ ++a +a+++kl++e ++Lea+   L
  MMETSP1325-20131115|7369_1  4 VRAKREALEAAKANIEKLRKEVAALEAKPGHL 35
                56778888999999999999999999875555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       664  (0.0485664); expected 273.4 (0.02)
Passed bias filter:                      606  (0.0443242); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.62
# Mc/sec: 328.53
//
Query:       MMETSP1325-20131115|7370_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 343.63
//
Query:       MMETSP1325-20131115|7375_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-29  101.3   0.0    3.7e-29  101.2   0.0    1.0  1  PF00022.14 Actin


Domain annotation for each model (and alignments):
>> PF00022.14  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.2   0.0   2.7e-33   3.7e-29      18     123 ..       1     114 []       1     114 [] 0.96

  Alignments for each domain:
  == domain 1    score: 101.2 bits;  conditional E-value: 2.7e-33
  PF00022.14  18 aGfagedaPkavipsvvgkprgekvea........klyvgdealekrpelevrnpvedGvvedwdameelwehvlkeelkvdpeehpllltepplnppanrekateivfEkfkv 123
                 +G++g+  P+ ++p+ ++ +   + ++        ++y+g+ea+++ +  ++++p+++G+ve+wd+me+lw++ +++ l+ +pe+h +llteppln+p+nre+++ei+fE+++v
  MMETSP1325-20131115|7375_1   1 MGYSGNCEPQYIVPTTIAVKAAVGGHNkdeglddiDFYIGNEAYAHSSTHQINYPIRHGLVENWDNMERLWQQCIFKYLRCEPEDHYFLLTEPPLNTPENRENTAEIMFETYNV 114
                 6*****************8888777667889999******************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 525.36
//
Query:       MMETSP1325-20131115|7374_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00028   20.9   0.3    0.00048   20.2   0.2    1.4  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)
  ------ inclusion threshold ------
      0.085   11.7   0.4       0.15   11.0   0.1    1.5  2  PF01785.12 Closterovirus coat protein
        2.6    8.1   7.2       0.66   10.0   0.8    2.2  2  PF10439.4  Bacteriocin class II with double-glycine leader peptide


Domain annotation for each model (and alignments):
>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2   1.1e-07   0.00048       1      36 [.     137     172 ..     137     173 .] 0.96

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 1.1e-07
   PF08246.7   1 FeswmdaygkkYrhsseinerfenFkeNlrqiqehN 36 
                 F ++++++ ++Y++++e+  rf  Fke l++i  +N
  MMETSP1325-20131115|7374_1 137 FTKFKADFRREYADDEEETMRFGLFKESLKNIDFLN 172
                 899*****************************9888 PP

>> PF01785.12  Closterovirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       0.2   9.3e+02      53      63 ..      94     104 ..      79     127 .. 0.58
   2 ?   11.0   0.1   3.2e-05      0.15       7      48 ..     121     161 ..     115     168 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.2
  PF01785.12  53 anlsTSeKvky 63 
                   +sTS+K + 
  MMETSP1325-20131115|7374_1  94 FEKSTSSKPAA 104
                 56788888764 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 3.2e-05
  PF01785.12   7 sevdasklneeevkellekfkealktklklsdedilvhlall 48 
                  +++ ++l+e++vk l++kfk++++++  ++de+  ++++l+
  MMETSP1325-20131115|7374_1 121 MKIKYAELHEDDVKGLFTKFKADFRRE-YADDEEETMRFGLF 161
                 5667789********************.66666666666655 PP

>> PF10439.4  Bacteriocin class II with double-glycine leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.4     0.077   3.5e+02      33      42 ..       2      11 ..       1      19 [. 0.61
   2 ?   10.0   0.8   0.00015      0.66      41      61 ..      47      67 ..      30      71 .. 0.48

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.077
   PF10439.4 33 aaaGalaGaa 42
                +aaGa+aGa+
  MMETSP1325-20131115|7374_1  2 IAAGAIAGAG 11
                4555555554 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00015
   PF10439.4 41 aatggavGglaGAlvGavvGa 61
                ++++ a+G++aG ++G++ Ga
  MMETSP1325-20131115|7374_1 47 KGWCIAAGAIAGVMLGGAYGA 67
                233333444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       549  (0.0401551); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.47s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 829.14
//
Query:       MMETSP1325-20131115|7373_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 534.19
//
Query:       MMETSP1325-20131115|7376_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-11   41.9   0.0    8.1e-11   41.6   0.0    1.1  1  PF00462.19 Glutaredoxin
  ------ inclusion threshold ------
      0.092   12.8   0.0       0.11   12.6   0.0    1.1  1  PF13417.1  Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   1.2e-14   8.1e-11      11      60 .]       2      54 ..       1      54 [. 0.96

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 1.2e-14
                HHHHHHHHHHHTTHHEEEEETTTCH...HHHHHHHHHHSSBSSSEEEETTEEE CS
  PF00462.19 11 yCkkakrlLdelgvkyeeidvdedp...eireelkelsgwrtvPqvfidgehi 60
                +C+kak++Ld +g ky+++++d+ +   ++r+el +++++++vP ++id  +i
  MMETSP1325-20131115|7376_1  2 FCVKAKAVLDAKGAKYTVYELDQAAdgpALRAELGAKVDRTSVPAIWIDKVFI 54
                9**********************97788*********************9987 PP

>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.6e-05      0.11       9      53 ..       2      50 ..       1      58 [. 0.83

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.6e-05
                HHHHHHHHHHH----EEE----TTTT....HHHHHHH-TT--SSEEE-- CS
   PF13417.1  9 yarkvrlaLeekglpyelvevtpgkk....rpellalnpkgkvPvLedd 53
                ++ k+ ++L  kg  y+++e++   +    r+el a+  +  vP++ +d
  MMETSP1325-20131115|7376_1  2 FCVKAKAVLDAKGAKYTVYELDQAADgpalRAELGAKVDRTSVPAIWID 50
                899******************9776655668888999999999998666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|7377_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.8   0.0      0.083   12.6   0.0    1.2  1  PF02749.11 Quinolinate phosphoribosyl transferase, N-terminal domain
       0.14   12.6   0.0       0.15   12.5   0.0    1.1  1  PF01922.12 SRP19 protein


Domain annotation for each model (and alignments):
>> PF02749.11  Quinolinate phosphoribosyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.2e-05     0.083       8      61 ..       3      65 ..       1      74 [. 0.87

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.2e-05
                H.HHH-SS-EEEEEEE-SS-EE----HHHHHHHHHT......TTTEE...E------EE---- CS
  PF02749.11  8 tealipeeqratasliakeegvvaGlevveevfeql......gleve...wlvkdGerveage 61
                +++li  ++ a+a+l++ +++v a  ++++ v++ +      +le++   +  +dG+ + ++e
  MMETSP1325-20131115|7377_1  3 ARSLIKTSTSASARLYSTSKAVRAPATMAASVLREVggpdamKLETDypvPELNDGQVLVKNE 65
                5689********************************999977666666677888888877765 PP

>> PF01922.12  SRP19 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.3e-05      0.15      10      70 ..       8      66 ..       2      77 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
                TTS-ST----S-CCC-BSS--HHHHHHHHHH----EEE-TS-TTCCCTTS----EEES.-- CS
  PF01922.12 10 skltrseGRrvpkelaVenPtleeiaealkklglkvvveeekkyPrekfeeegrvrvelke 70
                ++ t ++ R  ++++aV+ P     a +l+++g ++ ++ e  yP     ++g+v v+ ++
  MMETSP1325-20131115|7377_1  8 KTSTSASARLYSTSKAVRAPATM-AASVLREVGGPDAMKLETDYPVP-ELNDGQVLVKNEY 66
                67889999************766.5899*****************99.7899999999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 394.40
//
Query:       MMETSP1325-20131115|7378_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-13   49.3   0.6    5.1e-13   49.1   0.4    1.1  1  PF12400.3 Vaculolar membrane protein


Domain annotation for each model (and alignments):
>> PF12400.3  Vaculolar membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.4   3.7e-17   5.1e-13      68     128 ..       2      62 ..       1      63 [. 0.97

  Alignments for each domain:
  == domain 1    score: 49.1 bits;  conditional E-value: 3.7e-17
   PF12400.3  68 lmKlivllllllfekllskvasllLswleenpkleliivmlivPlilNalqfwivDniikk 128
                 + K+iv +ll+ +++l++ ++++l+++l++ p+ el++vm+++P +l++lqfw+ D ++k+
  MMETSP1325-20131115|7378_1   2 MNKVIVATLLWSTSSLMEPFGNWLFGPLQSTPEAELVVVMVLCPWLLTTLQFWLFDMFLKS 62 
                 68*********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 738.47
//
Query:       MMETSP1325-20131115|7381_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.2e-17   62.6   0.1    2.6e-17   62.3   0.1    1.0  1  PF03588.9 Leucyl/phenylalanyl-tRNA protein transferase


Domain annotation for each model (and alignments):
>> PF03588.9  Leucyl/phenylalanyl-tRNA protein transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   0.1   1.9e-21   2.6e-17      96     158 ..      10      74 ..       2      77 .. 0.92

  Alignments for each domain:
  == domain 1    score: 62.3 bits;  conditional E-value: 1.9e-21
   PF03588.9  96 g..yaHSvEvweedeLvgGlyGvalgrvffgesmfsrkkdAskvalvklvelLkargfeLiDaqv 158
                    ++H +Evwe+ +Lv+G++G ++g+v++++s+fsr++ A+ v++++ ++lL+++g++L+D+++
  MMETSP1325-20131115|7381_1  10 AlvQMHTFEVWEGPNLVAGEMGYSVGSVYTSLSGFSRANSAGSVQMAVTARLLQHAGASLWDLGM 74 
                 43478*********************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 377.20
//
Query:       MMETSP1325-20131115|7380_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.53    9.3  21.9       0.88    8.6  15.2    1.5  1  PF04641.7  Replication termination factor 2
        2.1    7.7  22.1       0.33   10.3  12.4    1.8  1  PF06658.7  Protein of unknown function (DUF1168)
        8.3    4.1   8.0        9.6    3.9   5.5    1.2  1  PF10220.4  Uncharacterized conserved protein (DUF2146)


Domain annotation for each model (and alignments):
>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6  15.2   0.00019      0.88     159     233 ..      27     101 ..       2     151 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00019
   PF04641.7 159 efkeedvvplnptkeelellkarleeekakkkkkkkkkkkkkaeakgekaeaeaksksskeesskagkkkekkkl 233
                 +  e++ + +  +k e+++++  +eee+a++kk+ k+kk kk ++++eka+ae++++  +  +++ ++k+ +++ 
  MMETSP1325-20131115|7380_1  27 AKREAERIRIASEKAEEAYMMLLMEEEEAEAKKSGKSKKAKKRAKQKEKAKAETEMEDGAVLGKTDSHKQGNTAY 101
                 3334567***************************99999999999999988888887765443333333333222 PP

>> PF06658.7  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3  12.4   7.2e-05      0.33      46     129 ..      28     115 ..      23     128 .. 0.53

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 7.2e-05
   PF06658.7  46 rrEyeRlelmdeevkkekedeefqqkreekekkdeektaKkrekRekkkqkkkkkkkkkkee....kkeekesekkseesseeeeee...e 129
                 +rE+eR++   e++++       +++ +e++k  ++k aKkr+k    k+k+k + + + +     + ++k+++   ee+s  ++     +
  MMETSP1325-20131115|7380_1  28 KREAERIRIASEKAEEAYMMLLMEEEEAEAKKSGKSKKAKKRAKQ---KEKAKAETEMEDGAvlgkTDSHKQGNTAYEEDSLGKSAPsspQ 115
                 79******9999998888888888877777777777777777663...3333333333333322222222222222222222222223321 PP

>> PF10220.4  Uncharacterized conserved protein (DUF2146)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   5.5    0.0021       9.6     547     665 ..      55     170 ..       3     180 .. 0.70

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0021
   PF10220.4 547 raAefinnslsaakkleeaeeeaadeeedleleedkeeqlqgssksqssasdlalsiaedseeseeeseasakgtsrkeedeeeasktdrekrikalerlestteyLpgvvhtvspaGl 665
                 + A++  +s++a k+ +++e+++a++e +  +  +k ++ ++ ++   ++++l  s  ++++ ++e++e    ++sr+ +  +++   +   r +a + ++ t  + p+ + +  paGl
  MMETSP1325-20131115|7380_1  55 AEAKKSGKSKKAKKRAKQKEKAKAETEMEDGAVLGKTDSHKQGNT-AYEEDSLGKSAPSSPQGQHEQAEVA--QGSRSADAGSPRRASEAGSRSTASATSPGTSSFRPSTLGPGGPAGL 170
                 556777778888888888888877777666666555444433333.4456778888766666655555544..4444444667777777778888888888888888887777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1807  (0.132168); expected 273.4 (0.02)
Passed bias filter:                      673  (0.0492247); expected 273.4 (0.02)
Passed Vit filter:                       110  (0.00804564); expected 13.7 (0.001)
Passed Fwd filter:                        30  (0.00219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.88u 0.45s 00:00:01.33 Elapsed: 00:00:00.69
# Mc/sec: 656.39
//
Query:       MMETSP1325-20131115|7382_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 596.54
//
Query:       MMETSP1325-20131115|7383_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 342.34
//
Query:       MMETSP1325-20131115|7379_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.51   10.6   5.1       0.26   11.5   1.6    1.9  2  PF12732.2  YtxH-like protein
          1    8.7   8.1        1.7    8.0   5.6    1.3  1  PF03066.10 Nucleoplasmin
        1.9    8.5  14.7      0.099   12.6   6.4    1.7  2  PF03247.9  Prothymosin/parathymosin family
        5.6    4.4   9.1          8    3.9   6.3    1.1  1  PF04931.8  DNA polymerase phi
        6.2    6.2  10.2        1.6    8.2   3.6    2.0  2  PF04546.8  Sigma-70, non-essential region


Domain annotation for each model (and alignments):
>> PF12732.2  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.6   4.2e+03      43      66 ..      87     109 ..      69     116 .. 0.57
   2 ?   11.5   1.6   9.5e-05      0.26      29      72 ..     195     238 ..     191     243 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 1.6
   PF12732.2  43 qelltearekvkekaesladkvke 66 
                 q++  +++ +++ k+++   ++ke
  MMETSP1325-20131115|7379_1  87 QDIVGHMKATYNAKLQR-QASIKE 109
                 45555555554444443.122333 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 9.5e-05
   PF12732.2  29 eelkkkaddlkekaqelltearekvkekaes.ladkvkekakelk 72 
                 +e+k+ +d+l  +aqe++++ar+ vke+++  ++ ++ +++kel+
  MMETSP1325-20131115|7379_1 195 AEIKEGTDHLMARAQEYAKQARD-VKERIKGaTTRDAMKATKELT 238
                 79*********************.******988888888888876 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.6   0.00062       1.7     109     135 ..      38      64 ..       9      78 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00062
                 .........----XXXXXXXXXXXXXX CS
  PF03066.10 109 leedesldeeddeedeeeeddeeddde 135
                 ++e+e+  +e d++ e++e++e++d++
  MMETSP1325-20131115|7379_1  38 VHEEEHYLDEHDDDGEDDEEEEDEDED 64 
                 333333333333333333333333333 PP

>> PF03247.9  Prothymosin/parathymosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   6.4   3.6e-05     0.099      13      78 ..       3      64 ..       1      85 [. 0.45
   2 ?   -2.3   0.2       1.6   4.2e+03      19      19 ..     218     218 ..     190     244 .. 0.54

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 3.6e-05
   PF03247.9 13 akdLkeKKevveekekakdapangneneeNgedeaddeedeeeekeeedeeeegegeeeeeeeeee 78
                +  Lk K+  + e  k+k     g++    + de +    +eee+  ++ +++ge++eeee+e+e+
  MMETSP1325-20131115|7379_1  3 TEGLKGKRITISEDGKLKLD--TGTATSGAAGDELQPV--HEEEHYLDEHDDDGEDDEEEEDEDED 64
                56666666666555555543..4555222223333333..33333223333333333333333332 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.6
   PF03247.9  19 K 19 
                  
  MMETSP1325-20131115|7379_1 218 V 218
                 1 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   6.3    0.0029         8     673     707 ..      46      76 ..      29      85 .. 0.67

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.0029
   PF04931.8 673 seseddsEdgeedEkedddeavedvvnidkevrra 707
                 +e +dd+Ed+ee  +ed+de++  ++ ++ ++r  
  MMETSP1325-20131115|7379_1  46 DEHDDDGEDDEE--EEDEDEDH--LAHLEASFRAS 76 
                 455556666665..78889999..99998888866 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.6   0.00057       1.6      37      67 ..      34      69 ..      11     122 .. 0.58
   2 ?    0.5   0.1      0.12   3.4e+02     180     203 ..     202     225 ..     186     250 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00057
   PF04546.8 37 eeeeaeeeseddeeeeeddddddededeee.....e 67
                e ++ +ee++  +e ++d +dd+e+ede+e      
  MMETSP1325-20131115|7379_1 34 ELQPVHEEEHYLDEHDDDGEDDEEEEDEDEdhlahL 69
                333344444444444444444444444443335441 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.12
   PF04546.8 180 eellkkkkkyaealerveediqra 203
                 + l+++ ++ya+++++v+e i+ a
  MMETSP1325-20131115|7379_1 202 DHLMARAQEYAKQARDVKERIKGA 225
                 455666677777777777777644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1032  (0.0754827); expected 273.4 (0.02)
Passed bias filter:                      630  (0.0460796); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.41s 00:00:01.07 Elapsed: 00:00:00.63
# Mc/sec: 1000.38
//
Query:       MMETSP1325-20131115|7384_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00018   20.5   0.3    0.00088   18.2   0.0    2.0  2  PF00654.15 Voltage gated chloride channel
  ------ inclusion threshold ------
      0.023   13.5   0.2      0.029   13.2   0.2    1.1  1  PF04789.10 Protein of unknown function (DUF621)


Domain annotation for each model (and alignments):
>> PF00654.15  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.2     0.028   1.9e+02     146     146 ..      80      80 ..      31     111 .. 0.49
   2 !   18.2   0.0   1.3e-07   0.00088       2      46 ..     109     156 ..     108     157 .] 0.86

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.028
                 T CS
  PF00654.15 146 s 146
                 +
  MMETSP1325-20131115|7384_1  80 K 80 
                 1 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 1.3e-07
                 HHHHHHHCCCCC-CCG-----TTT---TTSSS--...-HHHHHHHHH- CS
  PF00654.15   2 ggllagllvkrvapeaagsGipevkaalngvkgp...lslrtllvkvv 46 
                 ++ l++llv+ v+p+aagsG pe + +ln + ++   ++l+t ++k+v
  MMETSP1325-20131115|7384_1 109 LAGLSSLLVQVVEPNAAGSGLPELISYLNDKPINpsfFTLKTSFTKLV 156
                 57799************************9999977777777777765 PP

>> PF04789.10  Protein of unknown function (DUF621)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   4.2e-06     0.029      34     107 ..      58     138 ..      42     150 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.2e-06
  PF04789.10  34 vvttllttv.fvalivilwgyfkpmkffwfltqltisvfiisssn.lvinvpatls.....lvskeaaqsglfsfisylid 107
                  v+ l+  + +v  +++ w   k ++f+ ++ q t  vf  ++    +  v a ls     +v  +aa sgl  +isyl d
  MMETSP1325-20131115|7384_1  58 CVAVLVGLIeYVPTVMLAWSISKKFEFYDYVLQYTGNVFAAAAVLgALGAVLAGLSsllvqVVEPNAAGSGLPELISYLND 138
                 455555443378889999*********************877653123345555543322257789*************88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.53
# Mc/sec: 709.86
//
Query:       MMETSP1325-20131115|7385_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.0   8.7       0.19   10.8   6.1    1.0  1  PF05432.6 Bone sialoprotein II (BSP-II)
       0.83    9.3   2.5       0.93    9.2   1.8    1.0  1  PF06459.7 Ryanodine Receptor TM 4-6


Domain annotation for each model (and alignments):
>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   6.1   2.8e-05      0.19     148     185 ..       2      39 ..       1      42 [. 0.86

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.8e-05
   PF05432.6 148 eeeaeveeneqsvnGtstnstevdsGngssggdngeeg 185
                 eee+e ee++ ++  ++ n +evd+G g   gd++ee+
  MMETSP1325-20131115|7385_1   2 EEEEEEEEEDAAIAYATGNGAEVDDGGGPDDGDDDEEE 39 
                 55666678899999999*****************9997 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.8   0.00014      0.93     198     234 ..       4      44 ..       1      47 [. 0.56

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00014
   PF06459.7 198 aeeeeeeesaee......eetseedegsgddeeeeeeeaivyf 234
                 +eeeeee  a        ++ + +d+g  dd++++eee++v+ 
  MMETSP1325-20131115|7385_1   4 EEEEEEE-DA-AiayatgNGAEVDDGGGPDDGDDDEEEPVVML 44 
                 2222222.22.24577766666666667777699999988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|7387_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   24.8   0.5     0.0062   16.4   0.1    3.2  3  PF02985.17 HEAT repeat
  ------ inclusion threshold ------
       0.13   12.8   0.1         23    5.6   0.0    2.9  3  PF13513.1  HEAT-like repeat
       0.22   10.6   7.1        0.3   10.1   4.9    1.2  1  PF06524.7  NOA36 protein
       0.25    9.2   2.3       0.25    9.1   1.6    1.1  1  PF02724.9  CDC45-like protein
       0.39    8.6   5.4        3.9    5.3   0.0    2.0  2  PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
       0.48    8.9   9.3       0.63    8.5   6.5    1.2  1  PF10446.4  Protein of unknown function (DUF2457)
       0.78    7.4   6.9       0.77    7.4   4.8    1.1  1  PF04147.7  Nop14-like family
        1.4    8.0   7.5        1.4    8.0   5.2    1.2  1  PF05285.7  SDA1
        1.5    8.7   6.0        2.2    8.2   4.1    1.3  1  PF11081.3  Protein of unknown function (DUF2890)
        1.7    6.2  13.4        2.3    5.7   9.3    1.1  1  PF04931.8  DNA polymerase phi
        2.9    8.0  13.5       0.51   10.4   6.9    1.6  2  PF09026.5  Centromere protein B dimerisation domain


Domain annotation for each model (and alignments):
>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.036        44       1      15 [.      17      31 ..      17      32 .. 0.91
   2 ?    0.2   0.0       0.8   9.9e+02      14      28 ..      39      53 ..      36      56 .. 0.78
   3 !   16.4   0.1     5e-06    0.0062      11      28 ..     114     131 ..     112     133 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.036
                HHHHHHHHHTSSSHH CS
  PF02985.17  1 llPlllkllnDpspe 15
                ++Pl+lk   Dp+ e
  MMETSP1325-20131115|7387_1 17 IVPLFLKFVGDPDDE 31
                79**********975 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.8
                HHHHHHHHHHHHHHH CS
  PF02985.17 14 peVReaAaeaLgala 28
                 e Re++++ +  ++
  MMETSP1325-20131115|7387_1 39 NELRETCLQGFESFV 53
                6789***99988776 PP

  == domain 3    score: 16.4 bits;  conditional E-value: 5e-06
                 SSSHHHHHHHHHHHHHHH CS
  PF02985.17  11 DpspeVReaAaeaLgala 28 
                 D+s++VR+aA++ L a++
  MMETSP1325-20131115|7387_1 114 DTSWKVRRAAVKVLNAIL 131
                 99************9996 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.16   1.9e+02      23      43 ..      11      31 ..       5      34 .. 0.74
   2 ?    0.7   0.0      0.61   7.6e+02       3      32 ..      41      70 ..      39      81 .. 0.70
   3 ?    5.6   0.0     0.018        23       1      11 [.     117     127 ..     111     136 .. 0.71

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.16
   PF13513.1 23 epavpellpaLlelLedddde 43
                + +++ ++p++l+   d+dde
  MMETSP1325-20131115|7387_1 11 ARHLDSIVPLFLKFVGDPDDE 31
                456778888888888887775 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.61
   PF13513.1  3 vRraAawaLGrlaggeprllepavpellpa 32
                +R+ +++++ +   ++ r ++p+++ +  a
  MMETSP1325-20131115|7387_1 41 LRETCLQGFESFVLRCSREIQPHLESITTA 70
                788888888554447888888888887665 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.018
   PF13513.1   1 wrvRraAawaL 11 
                 w vRraA+++L
  MMETSP1325-20131115|7387_1 117 WKVRRAAVKVL 127
                 66777777766 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.9   0.00024       0.3     268     303 ..      80     116 ..      63     126 .. 0.57

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00024
   PF06524.7 268 nygyesdddeee..saedydeeededddddeeedetse 303
                 ny+y+ dd+e+e  ++e+ ++e+  +d+d e+ed+++ 
  MMETSP1325-20131115|7387_1  80 NYNYG-DDEEDEmeEEEEWEDEDGYEDEDVEDEDDDTS 116
                 67776.44444432333444444445555555555443 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.6    0.0002      0.25     139     179 ..      84     120 ..      36     133 .. 0.58

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0002
   PF02724.9 139 sdseddeeeeessasekrksesdedeeddddeededeeqrk 179
                 +d+e+de eee++ ++ ++  +ded ed+d   d+  ++ +
  MMETSP1325-20131115|7387_1  84 GDDEEDEMEEEEEWED-EDGYEDEDVEDED---DDTSWKVR 120
                 3333333333333332.2233333333333...33334444 PP

>> PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0032       3.9     279     323 ..      12      55 ..       3      61 .. 0.85
   2 ?    3.6   2.4      0.01        13     228     270 ..      86     116 ..      72     133 .. 0.41

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0032
   PF05327.6 279 ekLDailellfehleseftseeldeekaenlfetLlslFesliLp 323
                 + LD+i+ l+++++ +  ++e +++e++++l et l+ Fes +L 
  MMETSP1325-20131115|7387_1  12 RHLDSIVPLFLKFVGDP-DDEATHTEQHNELRETCLQGFESFVLR 55 
                 68***********9965.566666679***************996 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.01
   PF05327.6 228 eeeeellaeeeeeeeeelfdlddddseeesvesedeedeeaks 270
                 +ee+e+ +eee e+e++ +d d +d+++             +s
  MMETSP1325-20131115|7387_1  86 DEEDEMEEEEEWEDEDGYEDEDVEDEDD------------DTS 116
                 2222222222222222222222222111............222 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   6.5   0.00051      0.63      54      83 ..      86     115 ..      58     126 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00051
   PF10446.4  54 dededdeeddddeDeddddddddeDdedde 83 
                 de+++ ee+++ eDed  +d+d eD++dd+
  MMETSP1325-20131115|7387_1  86 DEEDEMEEEEEWEDEDGYEDEDVEDEDDDT 115
                 222222222222333333333333333333 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.8   0.00062      0.77     352     381 ..      85     114 ..      23     126 .. 0.58

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00062
   PF04147.7 352 eddddeeeeeedvdedeeeedeedeesdde 381
                 +d++de eeee++++++  ede+ e++dd+
  MMETSP1325-20131115|7387_1  85 DDEEDEMEEEEEWEDEDGYEDEDVEDEDDD 114
                 112222222222332222222222222222 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.2    0.0011       1.4     105     137 ..      84     116 ..      27     129 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0011
   PF05285.7 105 sdeededeDeegewvdvesdeeeessDsedeee 137
                  d+e+++ +ee+ew+d++  e+e+ +D++d+ +
  MMETSP1325-20131115|7387_1  84 GDDEEDEMEEEEEWEDEDGYEDEDVEDEDDDTS 116
                 455555555567777766654445566665544 PP

>> PF11081.3  Protein of unknown function (DUF2890)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.1    0.0017       2.2      33      63 ..      86     116 ..      76     135 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0017
   PF11081.3  33 eeeeeledwedSldeedeeaeeveeetaaks 63 
                 +ee+e+e++e+  de+  e+e+ve+e+ ++s
  MMETSP1325-20131115|7387_1  86 DEEDEMEEEEEWEDEDGYEDEDVEDEDDDTS 116
                 6788999988999999999999999988774 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   9.3    0.0018       2.3     661     714 ..      87     129 ..      78     130 .. 0.51

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0018
   PF04931.8 661 dedelkeiedseseseddsEdgeedEked.ddeavedvvnidkevrralvkvLea 714
                 +        ++e e+e+++Ed++  E+ed +de+     +   +vrra vkvL+a
  MMETSP1325-20131115|7387_1  87 E--------EDEMEEEEEWEDEDGYEDEDvEDEDD----DTSWKVRRAAVKVLNA 129
                 3........34444444444444322222111222....223489********96 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.1   6.3e+03      29      31 ..      33      35 ..      24      48 .. 0.47
   2 ?   10.4   6.9   0.00041      0.51       9      38 ..      84     114 ..      75     135 .. 0.64

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 5.1
   PF09026.5 29 ded 31
                 + 
  MMETSP1325-20131115|7387_1 33 THT 35
                111 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00041
   PF09026.5   9 eedsesdseeeeedeeede.ededeedeeed 38 
                 ++d e + eeeee e+ed  eded ede++d
  MMETSP1325-20131115|7387_1  84 GDDEEDEMEEEEEWEDEDGyEDEDVEDEDDD 114
                 4566667777777777775134444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       530  (0.0387654); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 619.44
//
Query:       MMETSP1325-20131115|7386_1  [L=271]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-05   24.3   0.0    2.6e-05   23.4   0.0    1.5  1  PF08123.8 Histone methylation protein DOT1
    0.00048   20.5   0.0    0.00076   19.9   0.0    1.3  1  PF12847.2 Methyltransferase domain
  ------ inclusion threshold ------
      0.032   14.1   0.0      0.057   13.3   0.0    1.4  1  PF13659.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF08123.8  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   5.8e-09   2.6e-05      21      91 ..      41     118 ..      36     210 .. 0.68

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 5.8e-09
                 G----B-HHHHHHHHHH....TT-----...EEEEE------HHHHHHHH----EEE--B--HHHHHHHHHHHHHHHH CS
   PF08123.8  21 evYGEllpeflsevldk....vnlkked...vFvDLGSGvGnvvlqaalevgcklsvGvEimdnaselaekqkeelkk 91 
                  vYGE  ++   e++d+      ++ +       DLGSG G++vl  a + + k + GvE  ++  ++a ++ e+ ++
  MMETSP1325-20131115|7386_1  41 LVYGEYPTDTFLEMIDRacghAGIGADRsefRMADLGSGTGRLVLWCAINQRWKSCRGVEFLESIHKVAADRLEIARA 118
                 5899988887777777522223454433111357**********************************9998877654 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.7e-07   0.00076       4     109 ..      72     188 ..      69     191 .. 0.69

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.7e-07
   PF12847.2   4 rilDlGcGtGslslelarlrpgakvvgvDpseeslelarena...........ksldleeriellqgdakeelsllerfDavllkgltldallal.deprrv....lealpkllkpggrlvi 109
                 r  DlG+GtG+l l+ a  ++     gv++ e   ++a +++           + l +++++ + +  +  + ++l + D+v++   t+  l ++ +++ +v     ++l k+l++g +++ 
  MMETSP1325-20131115|7386_1  72 RMADLGSGTGRLVLWCAINQRWKSCRGVEFLESIHKVAADRLeiaraaeatdlPGLIKADEVIFECDSW--DTADLSNLDVVFVYS-TG--LAEMvRDESNVlvelTDSLNKRLRKGCVVIT 188
                 568*********888888655555999999666666666666555544455555556667777777766..8888889******88.55..6666657777734434466688888777665 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.3e-05     0.057       2     110 ..      71     185 ..      70     190 .. 0.63

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.3e-05
   PF13659.1   2 drvldpgcGsGtfllaalell.aalllgvEldpraaalaarnlaragl...........aervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrd...lydafleaaarllkpgGv 110
                 +r+ d+g+G+G + l+++ +   +  +gvE  +   ++aa +l+ a++           a++v        +++   ++  +dl   ++ ++ ++g  ++ rd    + ++ + + ++l+ g v
  MMETSP1325-20131115|7386_1  71 FRMADLGSGTGRLVLWCAINQrWKSCRGVEFLESIHKVAADRLEIARAaeatdlpglikADEVI------FECD---SWDTADLSNLDVVFVYSTGLAEMVRDesnVLVELTDSLNKRLRKGCV 185
                 799*********99999977668************9****998888774443333334333333......3333...45555555555555544444443333222666666777776665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1325.33
//
Query:       MMETSP1325-20131115|7389_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 234.94
//
Query:       MMETSP1325-20131115|7390_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   27.8   2.8      0.069   13.1   0.2    3.0  3  PF13516.1  Leucine Rich repeat
    0.00073   19.1   0.2        1.7    8.8   0.0    2.3  2  PF00560.28 Leucine Rich Repeat
     0.0044   16.6   0.7     0.0087   15.6   0.5    1.5  1  PF13855.1  Leucine rich repeat
     0.0083   15.6   0.5        1.4    8.5   0.0    2.1  2  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
       0.11   11.7   1.5        9.4    5.6   0.2    3.5  4  PF02132.10 RecR protein


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.042   1.1e+02      13      24 .]       3      14 ..       1      14 [. 0.88
   2 !   11.0   0.1   0.00012      0.33       1      23 [.      16      39 ..      16      40 .. 0.89
   3 !   13.1   0.2   2.5e-05     0.069       1      22 [.      42      64 ..      42      65 .] 0.85

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.042
   PF13516.1 13 qigdeGlsaLan 24
                +++d G+ aLan
  MMETSP1325-20131115|7390_1  3 NVTDAGVTALAN 14
                589*******97 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00012
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + +Lt ++L+n++ ++d  + aLa
  MMETSP1325-20131115|7390_1 16 CAKLTAINLQNCHnLTDAAVIALA 39
                6689********76*****99998 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 2.5e-05
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaL 22
                ++nLts++L +++ +++  + aL
  MMETSP1325-20131115|7390_1 42 CTNLTSINLRFCGnLTGAAVIAL 64
                9***********76988777666 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00082       2.3       1      14 [.      18      32 ..      18      42 .. 0.85
   2 !    8.8   0.0   0.00063       1.7       1      13 [.      44      57 ..      44      62 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00082
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                +L+ ++L+++ nlt+
  MMETSP1325-20131115|7390_1 18 KLTAINLQNChNLTD 32
                6999*********97 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00063
                TESEEEETSS.BCB CS
  PF00560.28  1 nLeeLdLsgN.nlt 13
                nL++++L+++ nlt
  MMETSP1325-20131115|7390_1 44 NLTSINLRFCgNLT 57
                8*********9998 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.5   3.2e-06    0.0087      22      59 ..      14      53 ..       2      56 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 3.2e-06
   PF13855.1 22 kglsnLkvLdLs.gnnlksisp.eafkgLpsLreLnLsgN 59
                +++ +L+ ++L+ ++nl+      +  ++++L+++nL+ +
  MMETSP1325-20131115|7390_1 14 NHCAKLTAINLQnCHNLTDAAViALATHCTNLTSINLRFC 53
                6899********999**9775515689**********976 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0005       1.4      20      41 ..      12      35 ..       3      39 .. 0.75
   2 !    6.0   0.1    0.0031       8.5      23      34 ..      42      53 ..      37      63 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0005
   PF12799.2 20 lan.LpnLktLnLsnN.pisdlsa 41
                lan + +L+ +nL+n+ +++d  +
  MMETSP1325-20131115|7390_1 12 LANhCAKLTAINLQNChNLTDAAV 35
                5544889********955999665 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0031
   PF12799.2 23 LpnLktLnLsnN 34
                ++nL+++nL  +
  MMETSP1325-20131115|7390_1 42 CTNLTSINLRFC 53
                788888888776 PP

>> PF02132.10  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.067   1.8e+02      23      29 ..       1       7 [.       1      18 [. 0.81
   2 ?    5.6   0.2    0.0035       9.4      21      30 ..      25      34 ..      25      44 .. 0.80
   3 ?   -0.8   0.0      0.34   9.2e+02      23      28 ..      42      47 ..      39      50 .. 0.79
   4 ?    1.2   0.0      0.08   2.2e+02      22      27 ..      52      57 ..      51      61 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.067
  PF02132.10 23 Cgnltee 29
                C+n+t+ 
  MMETSP1325-20131115|7390_1  1 CRNVTDA 7 
                9999996 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0035
  PF02132.10 21 svCgnlteed 30
                ++C+nlt+  
  MMETSP1325-20131115|7390_1 25 QNCHNLTDAA 34
                58*****975 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.34
  PF02132.10 23 Cgnlte 28
                C nlt+
  MMETSP1325-20131115|7390_1 42 CTNLTS 47
                999986 PP

  == domain 4    score: 1.2 bits;  conditional E-value: 0.08
  PF02132.10 22 vCgnlt 27
                 Cgnlt
  MMETSP1325-20131115|7390_1 52 FCGNLT 57
                5****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.60
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|7392_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|7396_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-20   72.1   0.0    3.9e-20   71.8   0.0    1.1  1  PF00447.12 HSF-type DNA-binding


Domain annotation for each model (and alignments):
>> PF00447.12  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   0.0   2.8e-24   3.9e-20       2      71 ..      39     107 ..      38     123 .. 0.89

  Alignments for each domain:
  == domain 1    score: 71.8 bits;  conditional E-value: 2.8e-24
  PF00447.12   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFhkvkdeekk 71 
                 Fl k+ye++++ +  ++  w e g++fvv+d+  fa k++p++Fkh+nfaSFvRQLn YgF+k++++ + 
  MMETSP1325-20131115|7396_1  39 FLCKTYEMIDSCD-PKIGGWGEAGDTFVVHDPVYFAAKIIPTFFKHNNFASFVRQLNFYGFRKLRTDAAA 107
                 99*******9644.46678*********************************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 656.39
//
Query:       MMETSP1325-20131115|7393_1  [L=572]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-09   34.6   0.0    3.5e-08   32.8   0.0    2.0  2  PF13414.1  TPR repeat
    1.1e-05   24.7   1.2      0.025   14.3   0.0    3.6  4  PF07719.12 Tetratricopeptide repeat
    1.4e-05   24.3   0.8     0.0031   16.9   0.0    3.4  4  PF00515.23 Tetratricopeptide repeat
    3.3e-05   23.6   0.0    0.00011   21.8   0.0    1.9  1  PF13424.1  Tetratricopeptide repeat
     0.0012   18.3   0.4       0.16   11.7   0.0    3.0  2  PF13181.1  Tetratricopeptide repeat
     0.0025   17.8   0.1       0.02   14.9   0.0    2.5  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.7   6.2e+03      13      23 ..      38      48 ..      38      50 .. 0.82
   2 !   32.8   0.0   1.5e-11   3.5e-08       5      67 ..     394     455 ..     390     457 .. 0.94

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 2.7
   PF13414.1 13 lfkegdydeAi 23
                +f+ g++d Ai
  MMETSP1325-20131115|7393_1 38 YFHSGQLDSAI 48
                79999999998 PP

  == domain 2    score: 32.8 bits;  conditional E-value: 1.5e-11
   PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67 
                 +++e G  ++  ++y+ A+e+y+ + +   ++ + + n++l+y+ +g  +e+Ale + k+l l
  MMETSP1325-20131115|7393_1 394 VAFEIGRFYYGIREYASALEYYTLSSDTIGQHHVTFHNMGLCYYSMG-FPERALEFFGKSLGL 455
                 67899******************************************.9**********9966 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.2   2.7e+03      11      22 ..      38      49 ..      38      51 .. 0.89
   2 ?   -2.5   0.0       2.6   5.9e+03      10      18 ..     340     348 ..     339     348 .. 0.86
   3 !    6.7   0.2    0.0029       6.6       4      25 ..     395     416 ..     393     418 .. 0.90
   4 !   14.3   0.0   1.1e-05     0.025       4      32 ..     429     457 ..     427     463 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.2
                HHHTT-HHHHHH CS
  PF07719.12 11 yyklgdyeeAle 22
                y+++g+++ A+ 
  MMETSP1325-20131115|7393_1 38 YFHSGQLDSAIF 49
                899*******96 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.6
                 HHHHTT-HH CS
  PF07719.12  10 ayyklgdye 18 
                 a++klgd++
  MMETSP1325-20131115|7393_1 340 ALLKLGDWD 348
                 899****97 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.0029
                 HHHHHHHHHHTT-HHHHHHHHH CS
  PF07719.12   4 lynlGlayyklgdyeeAleafe 25 
                  +++G+ yy  ++y+ Ale++ 
  MMETSP1325-20131115|7393_1 395 AFEIGRFYYGIREYASALEYYT 416
                 5899****************96 PP

  == domain 4    score: 14.3 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAleldP 32 
                  +n+Gl+yy +g +e+Ale+f k+l l+ 
  MMETSP1325-20131115|7393_1 429 FHNMGLCYYSMGFPERALEFFGKSLGLNS 457
                 589*********************98886 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.84   1.9e+03      11      22 ..      38      49 ..      38      50 .. 0.89
   2 ?   -3.2   0.0         3   6.8e+03      10      18 ..     340     348 ..     339     348 .. 0.84
   3 ?    3.7   0.2      0.02        45       7      25 ..     398     416 ..     394     417 .. 0.88
   4 !   16.9   0.0   1.4e-06    0.0031       4      34 .]     429     459 ..     426     463 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.84
                HHHTT-HHHHHH CS
  PF00515.23 11 ylklgkydeAle 22
                y++ g++d A+ 
  MMETSP1325-20131115|7393_1 38 YFHSGQLDSAIF 49
                999*******96 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 3
                 HHHHTT-HH CS
  PF00515.23  10 aylklgkyd 18 
                 a+lklg++d
  MMETSP1325-20131115|7393_1 340 ALLKLGDWD 348
                 899***987 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.02
                 HHHHHHHTT-HHHHHHHHH CS
  PF00515.23   7 lGnaylklgkydeAleyye 25 
                 +G  y+   +y  Aleyy 
  MMETSP1325-20131115|7393_1 398 IGRFYYGIREYASALEYYT 416
                 78889999**********5 PP

  == domain 4    score: 16.9 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   4 lynlGnaylklgkydeAleyyekALelnPnn 34 
                 + n+G++y+++g ++ Ale++ k L ln ++
  MMETSP1325-20131115|7393_1 429 FHNMGLCYYSMGFPERALEFFGKSLGLNSEY 459
                 78************************99875 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0     5e-08   0.00011       7      76 ..     394     456 ..     391     458 .. 0.88

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 5e-08
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                 + ++++ +++  ++y +Ale+y  + + +   g +h    ++ +n++ +y+ +g  + Ale++ k+l + 
  MMETSP1325-20131115|7393_1 394 VAFEIGRFYYGIREYASALEYYTLSSDTI---GQHH----VTFHNMGLCYYSMGFPERALEFFGKSLGLN 456
                 56899*******************99775...6444....89************************9886 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.2     0.035        80       5      24 ..     396     415 ..     392     418 .. 0.91
   2 !   11.7   0.0   6.8e-05      0.16       5      31 ..     430     456 ..     428     460 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.035
                 TT---HHHHTT-HHHHHHHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeyl 24 
                 +++G+ Y    +y +A+ey+
  MMETSP1325-20131115|7393_1 396 FEIGRFYYGIREYASALEYY 415
                 789****************9 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 6.8e-05
                 TT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekalelk 31 
                 +n+G++Y ++G  + A+e++ k l l+
  MMETSP1325-20131115|7393_1 430 HNMGLCYYSMGFPERALEFFGKSLGLN 456
                 799*******************99886 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       3.4   7.7e+03      35      47 ..      38      50 ..      38      61 .. 0.75
   2 ?    0.9   0.0       0.2   4.6e+02      24      48 ..     391     415 ..     382     423 .. 0.79
   3 !   14.9   0.0   8.7e-06      0.02       5      56 ..     408     458 ..     406     465 .. 0.75

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 3.4
                HHH---HHHHHHH CS
   PF12895.2 35 lylngeykrAyel 47
                ++++g+ ++A++ 
  MMETSP1325-20131115|7393_1 38 YFHSGQLDSAIFD 50
                8999999999765 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.2
                 HHHCHHHHHHHHHH---HHHHHHHH CS
   PF12895.2  24 edaylyalAlclylngeykrAyell 48 
                 ++++++ ++  +y   ey +A+e++
  MMETSP1325-20131115|7393_1 391 DKDVAFEIGRFYYGIREYASALEYY 415
                 67889999*************9998 PP

  == domain 3    score: 14.9 bits;  conditional E-value: 8.7e-06
                 HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHC CS
   PF12895.2   5 yknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldss 56 
                 y +Al ++ +   +    ++++  ++++lc+y++g ++rA+e++ k l l+s+
  MMETSP1325-20131115|7393_1 408 YASALEYYTLSSDTIG--QHHVTFHNMGLCYYSMGFPERALEFFGKsLGLNSE 458
                 5666666664444433..38999*********************998666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.88u 0.34s 00:00:01.22 Elapsed: 00:00:00.55
# Mc/sec: 2492.21
//
Query:       MMETSP1325-20131115|7400_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00037   20.3   0.0    0.00041   20.2   0.0    1.0  1  PF00583.19 Acetyltransferase (GNAT) family
     0.0016   18.4   0.0     0.0017   18.3   0.0    1.0  1  PF13508.1  Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.048   13.6   0.0      0.051   13.5   0.0    1.1  1  PF13673.1  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> PF00583.19  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   8.9e-08   0.00041       4      49 ..       4      50 ..       2      51 .] 0.90

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 8.9e-08
                TTEBEEEEEEEEECTTS.CSTTEEEEEEEEESGGGTTTT-HHHHHHH CS
  PF00583.19  4 dgelvGfaslsvigedg.raertayieglaVspeyrgqGiGkaLlea 49
                ++++v+++++s+i++ g r ++ + +  l V p+ +g G+G++Ll  
  MMETSP1325-20131115|7400_1  4 EEKVVAAVAVSLIEDAGlRRGKMGRLLCLSVEPASQGGGVGTQLLHR 50
                579************986448***********************986 PP

>> PF13508.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   3.8e-07    0.0017      11      51 ..       4      51 .]       2      51 .] 0.82

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3.8e-07
   PF13508.1 11 dgeivGflvl.......redgetayiggvavdpeyrgkGlGskllnkl 51
                ++++v+ + +        + g+  ++ ++ v p+ +g G+G++ll+++
  MMETSP1325-20131115|7400_1  4 EEKVVAAVAVsliedagLRRGKMGRLLCLSVEPASQGGGVGTQLLHRA 51
                678888888866666665556777*********************986 PP

>> PF13673.1  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.1e-05     0.051      63      88 ..      25      50 ..       3      51 .] 0.61

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.1e-05
   PF13673.1 63 pdaslsllyvrpeargrGigraLlda 88
                + ++l  l+v p+ +g G+g++Ll++
  MMETSP1325-20131115|7400_1 25 KMGRLLCLSVEPASQGGGVGTQLLHR 50
                33447779****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|7405_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-05   24.1   9.1    4.1e-05   22.9   4.5    2.3  2  PF07699.8  GCC2 and GCC3
  ------ inclusion threshold ------
      0.012   15.2   0.3      0.012   15.2   0.2    2.2  2  PF07562.9  Nine Cysteines Domain of family 3 GPCR
       0.21   11.4   1.6       0.47   10.2   1.1    1.7  1  PF01363.16 FYVE zinc finger
       0.53    9.9   2.7       0.45   10.2   0.2    1.7  2  PF10080.4  Predicted membrane protein (DUF2318)
        2.1    8.0   7.4        3.7    7.3   4.4    1.8  2  PF12773.2  Double zinc ribbon
        2.5    7.8   8.6       0.27   10.9   1.4    2.2  2  PF01258.12 Prokaryotic dksA/traR C4-type zinc finger
        8.3    5.6  10.2        1.6    7.9   2.4    2.4  2  PF08271.7  TFIIB zinc-binding


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   4.5   2.1e-08   4.1e-05       6      48 .]       8      50 ..       2      50 .. 0.86
   2 ?    4.3   0.1     0.013        26      19      31 ..      41      53 ..      37      62 .. 0.81

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 2.1e-08
   PF07699.8  6 kgnkkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48
                +g+++CepC++G++ ++ g   C++C +++  ++  s    +C
  MMETSP1325-20131115|7405_1  8 AGSSTCEPCGEGYFAPKPGAYVCLKCSSEKGPEYDSSEGSAEC 50
                5678************************998888888877777 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.013
   PF07699.8 19 YkneegqkkCiaC 31
                Y ++eg+ +C  C
  MMETSP1325-20131115|7405_1 41 YDSSEGSAECDRC 53
                7888899999998 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.2     6e-06     0.012      27      52 ..      12      37 ..      10      39 .. 0.93
   2 ?    2.5   0.1     0.057   1.1e+02      35      49 ..      40      54 ..      37      60 .. 0.76

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 6e-06
   PF07562.9 27 dCvpCpegeisnetdettCkkCpeeq 52
                +C+pC eg +  + +++ C kC++e+
  MMETSP1325-20131115|7405_1 12 TCEPCGEGYFAPKPGAYVCLKCSSEK 37
                7*********************9986 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.057
   PF07562.9 35 eisnetdettCkkCp 49
                e+ +++++ +C +C 
  MMETSP1325-20131115|7405_1 40 EYDSSEGSAECDRCI 54
                677778999999996 PP

>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.1   0.00024      0.47      28      66 ..      13      56 ..       4      59 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00024
  PF01363.16 28 CrlCGk.........vvCskCsskrvekleeeaaeekevrvCkeClee 66
                C  CG+          vC kCss++ +      ++++    C++C+++
  MMETSP1325-20131115|7405_1 13 CEPCGEgyfapkpgaYVCLKCSSEKGPEY----DSSEGSAECDRCIAA 56
                788888888888888*********99554....667777779999876 PP

>> PF10080.4  Predicted membrane protein (DUF2318)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.2   0.00023      0.45      34      60 ..       9      35 ..       3      40 .. 0.87
   2 ?    2.1   1.2     0.073   1.4e+02      37      62 ..      29      57 ..      26      70 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00023
   PF10080.4 34 afdaCevCekkgYvqkgdklvCknCnv 60
                + ++Ce C++  +  k ++ vC +C  
  MMETSP1325-20131115|7405_1  9 GSSTCEPCGEGYFAPKPGAYVCLKCSS 35
                6689*****99999***********86 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.073
   PF10080.4 37 aCevC...ekkgYvqkgdklvCknCnvri 62
                 C  C   +   Y  ++++  C +C  ++
  MMETSP1325-20131115|7405_1 29 VCLKCsseKGPEYDSSEGSAECDRCIAAM 57
                58888743445699999999999997766 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   4.4    0.0019       3.7       9      49 ..       7      53 ..       3      54 .. 0.83
   2 ?    1.3   0.3      0.14   2.8e+02      11      19 ..      46      54 ..      40      66 .. 0.63

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0019
   PF12773.2  9 psgarfCpqCgaklkeataeevlCpsCge......svspkarfCpnC 49
                ++g+  C+ Cg+   +++  +++C +C +      ++s++++ C+ C
  MMETSP1325-20131115|7405_1  7 SAGSSTCEPCGEGYFAPKPGAYVCLKCSSekgpeyDSSEGSAECDRC 53
                578899*******997777789*****99888876688888888888 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.14
   PF12773.2 11 garfCpqCg 19
                g+  C++C 
  MMETSP1325-20131115|7405_1 46 GSAECDRCI 54
                444555554 PP

>> PF01258.12  Prokaryotic dksA/traR C4-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.4   0.00014      0.27       2      31 ..       7      34 ..       6      38 .. 0.86
   2 ?    0.3   0.4      0.27   5.3e+02       3       9 ..      45      53 ..      43      53 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00014
  PF01258.12  2 sygs..CedCGEpIpeaRlralpgarlCveCq 31
                s gs  Ce CGE +  ++    pga +C+ C 
  MMETSP1325-20131115|7405_1  7 SAGSstCEPCGEGYFAPK----PGAYVCLKCS 34
                566668***********9....*********5 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.27
  PF01258.12  3 ygs..CedC 9 
                +gs  C++C
  MMETSP1325-20131115|7405_1 45 EGSaeCDRC 53
                67778***9 PP

>> PF08271.7  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.3     0.066   1.3e+02      17      27 ..       8      18 ..       6      18 .. 0.82
   2 ?    7.9   2.4   0.00084       1.6       1      25 [.      28      53 ..      28      72 .. 0.93

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.066
                ---BB-SSS-B CS
   PF08271.7 17 rGelvCtdCGl 27
                 G  +C+ CG+
  MMETSP1325-20131115|7405_1  8 AGSSTCEPCGE 18
                68889****96 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00084
                EE-SSS--EE.HHB-S----BB-SSS CS
   PF08271.7  1 ykCPnCgste.lvfDaerGelvCtdC 25
                y+C +C s++  ++D + G   C +C
  MMETSP1325-20131115|7405_1 28 YVCLKCSSEKgPEYDSSEGSAECDRC 53
                89********99************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|7406_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|7407_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-11   44.0   0.0    4.3e-11   43.0   0.0    1.5  1  PF00005.22 ABC transporter
    5.3e-06   25.6   0.1    7.1e-06   25.2   0.1    1.1  1  PF02463.14 RecF/RecN/SMC N terminal domain
     0.0024   17.6   1.1      0.041   13.6   0.7    2.2  1  PF13558.1  Putative exonuclease SbcCD, C subunit
  ------ inclusion threshold ------
       0.02   14.7   0.0      0.025   14.4   0.0    1.1  1  PF13304.1  AAA domain
      0.026   14.2   0.0      0.031   14.0   0.0    1.2  1  PF05014.10 Nucleoside 2-deoxyribosyltransferase


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.0   1.6e-14   4.3e-11      85     118 .]      23      56 ..       6      56 .. 0.88

  Alignments for each domain:
  == domain 1    score: 43.0 bits;  conditional E-value: 1.6e-14
                 ----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  85 srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 +++ +LSgGqkqr+a+Ara++++p +l+LDE+t+
  MMETSP1325-20131115|7407_1  23 EKGVQLSGGQKQRIAIARAIVRDPSILILDEATS 56 
                 47789***************************96 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   2.6e-09   7.1e-06     136     210 ..      27      99 ..      15     108 .. 0.86

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 2.6e-09
                 G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHH..HH-BTBEEEEE-S-HHHHTT-SEEE- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellk..eksknaQfivislreemlekadklvg 210
                 +LSgG+k+ +a+a       v+  ++ +lDe  +aLD k  + v + l+     k+   i+i++r +++++adk+v 
  MMETSP1325-20131115|7407_1  27 QLSGGQKQRIAIAR----AIVRDPSILILDEATSALDTKSEKVVQQALDdlLVAKKRTTIIIAHRLSTIRNADKIVV 99 
                 79*****9888764....45788899**********************9544578899***************9874 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.7   1.5e-05     0.041      20      89 ..      15      71 ..       4      72 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.5e-05
   PF13558.1 20 dgkekelsrrtgtlSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEAFsklDeeniasllellr 89
                dg e+++ ++  +lSGG+kq         A+a ++ +       +++++LDEA+s lD ++ + + ++l+
  MMETSP1325-20131115|7407_1 15 DGYETQVGEKGVQLSGGQKQ-------RIAIARAIVR------DPSILILDEATSALDTKSEKVVQQALD 71
                66777777777788888883.......3344444444......489*************99887777765 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     9e-06     0.025     236     282 ..      27      70 ..       7      85 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 9e-06
   PF13304.1 236 dlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliell 282
                 +lS G+k+ +a++ a+ +++   s+l++DE  + L+ k  + + + l
  MMETSP1325-20131115|7407_1  27 QLSGGQKQRIAIARAIVRDP---SILILDEATSALDTKSEKVVQQAL 70 
                 68******************...************997655554444 PP

>> PF05014.10  Nucleoside 2-deoxyribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.1e-05     0.031      42      88 ..      73     120 ..      29     141 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.1e-05
                 -..-HHHHHHHHHHHH----S--B--EEEESSS-----TTT---TTTT CS
  PF05014.10  42 e.eseeaaraiyeadlellrqadavvanldpfraDsGtafElGyaval 88 
                 +  +++  + i +  l+ +r+ad +v+ +d++ + +Gt  El   va 
  MMETSP1325-20131115|7407_1  73 LlVAKKRTTIIIAHRLSTIRNADKIVVFMDGTVVEQGTHDELMGYVAA 120
                 2357788889999****************************6444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 714.11
//
Query:       MMETSP1325-20131115|7409_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   14.9   0.0      0.018   14.4   0.0    1.1  1  PF01323.15 DSBA-like thioredoxin domain
      0.017   15.0   0.0      0.022   14.6   0.0    1.2  1  PF13462.1  Thioredoxin


Domain annotation for each model (and alignments):
>> PF01323.15  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.7e-06     0.018     110     184 ..      82     159 ..      76     167 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.7e-06
                 HHHHHTST---SSHHHHHHHHHH----HHHHHHHCTS.....HHHHHHHHHHHHHHHHTT-----EEEE---EEE--SSS CS
  PF01323.15 110 fealwsegqaitddqellevaekaGldaeeldeales.....eavkeavrentaaaqslgvtGvPtvvvdgkrmvfGadr 184
                 +  +w+ g+ + d++ ++ v+ +aG+d ee+++ +++        + +++ +++++++ +v+  P v+v+    vfG+  
  MMETSP1325-20131115|7409_1  82 YSGAWD-GTHFADESCIKGVMHQAGIDYEEVERCMDEsggtnTGQNTILEAEMELGYASNVYSMPSVLVNQM-KVFGSIT 159
                 555666.788899999********************9666533334467888999**************998.9999865 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   3.2e-06     0.022     102     161 ..      94     167 ..      59     169 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3.2e-06
   PF13462.1 102 e.........algkdeefeaclede....k.lqalveadseeakaagiestPtfiingkkveenltyeelkali 161
                 e         a+ + ee+e c++++    +  ++ +ea++e   a+++ s+P++++n+ kv +++t   + ++i
  MMETSP1325-20131115|7409_1  94 EscikgvmhqAGIDYEEVERCMDESggtnTgQNTILEAEMELGYASNVYSMPSVLVNQMKVFGSITSTAVLRAI 167
                 13444444548888999*****765333232556678999999*****************99999988777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 883.10
//
Query:       MMETSP1325-20131115|7408_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-10   38.9   4.3    6.1e-10   38.4   3.0    1.2  1  PF00648.16 Calpain family cysteine protease


Domain annotation for each model (and alignments):
>> PF00648.16  Calpain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   3.0   4.4e-14   6.1e-10     244     297 ..       2      59 ..       1      60 [. 0.76

  Alignments for each domain:
  == domain 1    score: 38.4 bits;  conditional E-value: 4.4e-14
                 -------STTSGGGGGS-HHHHHHH..T...TSS-.---EEEEHHHHHHH-CEEEEE-S CS
  PF00648.16 244 veWkGaWsdesseWsevdeeekael..q...lkveedGefWmsfedflrefsrleicnl 297
                  eW G+Wsd+s+ Ws+     k+++  +   +k  +dG fWm+++df+++f++l++c l
  MMETSP1325-20131115|7408_1   2 FEWDGDWSDKSDMWSKHP-GVKQSVgfMaggTKDVDDGSFWMAWDDFVKYFDCLDVCVL 59 
                 69*************654.444444112122344569********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 709.32
//
Query:       MMETSP1325-20131115|7411_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.53
# Mc/sec: 158.25
//
Query:       MMETSP1325-20131115|7412_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 315.08
//
Query:       MMETSP1325-20131115|7413_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 206.09
//
Query:       MMETSP1325-20131115|7414_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   13.0   0.3      0.068   12.9   0.2    1.1  1  PF10998.3 Protein of unknown function (DUF2838)


Domain annotation for each model (and alignments):
>> PF10998.3  Protein of unknown function (DUF2838)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   4.9e-06     0.068      38      96 ..      14      76 ..       3      81 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.9e-06
   PF10998.3 38 mpirlytykkkklhyfllDlCyflnallllfl......wvlpksarlflsqfalaegtlalavil 96
                 ++r++  + ++++yf  D+ yf+n+ + lfl        + + + +fl   +la++ + +  ++
  MMETSP1325-20131115|7414_1 14 TMVRYAHDRSQTREYF--DFRYFINVSNALFLkaeaegLRTQDGRDYFLMAAWLAMAAAEVDGFT 76
                5689999999999998..**************766666699999999999999998877666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|7416_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-12   47.0   0.0    1.4e-12   47.0   0.0    1.0  1  PF00837.12 Iodothyronine deiodinase


Domain annotation for each model (and alignments):
>> PF00837.12  Iodothyronine deiodinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.0   0.0     1e-16   1.4e-12     183     235 ..      11      63 ..       4      65 .. 0.93

  Alignments for each domain:
  == domain 1    score: 47.0 bits;  conditional E-value: 1e-16
  PF00837.12 183 CrvvvdtmansssaaygalferlyviqegkilykGgkGPegykleevrawlek 235
                  ++v+d+m+n +s+ +gal+erl ++ +g++++ GgkGPe+y ++  r  l +
  MMETSP1325-20131115|7416_1  11 PPLVIDQMENVCSHSFGALPERLAILDKGRLIFLGGKGPEDYSVDACRRALGR 63 
                 479*********************************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|7417_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 361.80
//
Query:       MMETSP1325-20131115|7419_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 260.66
//
Query:       MMETSP1325-20131115|7415_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.45    8.5   2.7       0.58    8.1   1.9    1.1  1  PF11336.3  Protein of unknown function (DUF3138)
        0.5    7.7   2.7        0.6    7.4   1.9    1.1  1  PF05478.6  Prominin
        4.5    6.8  11.2       0.81    9.2   5.0    1.8  2  PF02996.12 Prefoldin subunit


Domain annotation for each model (and alignments):
>> PF11336.3  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   1.9   0.00013      0.58      33      93 ..       5      69 ..       2      83 .. 0.56

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00013
   PF11336.3 33 qlaalqqqvkelraa...laakpaaagggakiqsaaaaaaaapaad.aaaalteddvtelkeqva 93
                q++ +q+q+++++++   l+ +++ +    ++q +a  aaa p+    +  +t+++   l + ++
  MMETSP1325-20131115|7415_1  5 QMQEMQRQMQQMQETivmLQRQTTQTEVQMQAQLTAPPAAARPSKKeDTRPMTHEEKMALSQAIS 69
                56666666666665531122222233333344555555777776543566788888888877665 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   1.9   0.00013       0.6     248     335 ..       5      88 ..       3     111 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00013
   PF05478.6 248 vlkemkeaLesvsktvkelkeegsqlesglssvrrrlnellaklCktqeCakilsslsilaldadfsqlpdvteilenleevveadls 335
                 +++em+++++++++t+  l+ +++q e ++++  +    + +  +k+ e    + + +++al+   sqlp+ +   +++ e++++ + 
  MMETSP1325-20131115|7415_1   5 QMQEMQRQMQQMQETIVMLQRQTTQTEVQMQAQLTAPPAAARP-SKK-EDTRPMTHEEKMALSQAISQLPNEKL--SRVVEIIKERMP 88 
                 79*************************9998765544444444.444.33444455666666666677776543..666666666555 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.0   0.00018      0.81      85     116 ..       5      36 ..       4      40 .. 0.92
   2 ?   -2.0   0.1      0.52   2.4e+03      80      84 ..      81      85 ..      59     104 .. 0.51

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00018
                 HHHHHHHHHHHH---HHHHHHH---HHHHHHH CS
  PF02996.12  85 kleelekqlekleeeleklkdqittleanlaq 116
                 +++e+++q+++++e + +l++q t++e+++++
  MMETSP1325-20131115|7415_1   5 QMQEMQRQMQQMQETIVMLQRQTTQTEVQMQA 36 
                 5799**************************97 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.52
                HHHHH CS
  PF02996.12 80 ellkk 84
                e++k+
  MMETSP1325-20131115|7415_1 81 EIIKE 85
                22222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1459  (0.106714); expected 273.4 (0.02)
Passed bias filter:                      843  (0.0616589); expected 273.4 (0.02)
Passed Vit filter:                       104  (0.00760679); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.44s 00:00:01.05 Elapsed: 00:00:00.49
# Mc/sec: 938.98
//
Query:       MMETSP1325-20131115|7418_1  [L=281]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-31  109.5   1.6    2.9e-31  109.1   1.1    1.1  1  PF03747.9 ADP-ribosylglycohydrolase


Domain annotation for each model (and alignments):
>> PF03747.9  ADP-ribosylglycohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.1   1.1   2.2e-35   2.9e-31      91     283 ..      14     250 ..       3     255 .. 0.90

  Alignments for each domain:
  == domain 1    score: 109.1 bits;  conditional E-value: 2.2e-35
                 --S----HHHHHHHHCHH--................--B---GCC-CCHHHCCTS.THCCHHHHHHHHHHTT---HHHHHHHHHHHHHHHHH.HTT--CCHHHHCH.......HHHHCCT-HHHHHHHHHHHG---HCH......................................HHHH-----BHHHHHHHHHHHHHH.-SSS----HHHHT----CCCHHHH-----------T CS
   PF03747.9  91 aprdiGsttraalrnlesgepaaeagaqa.....ansagnGalmRiaplglvlag.dpeellelareaarlTHgdpravaaavayaaliaal.lrgkslsealdaa.....keqlataeadeelseeleaaralaesdr.................................vdaeeelgrlgsggyvvealpaalyallkaaddfeeallaavnlGgDtdttaaiaGallGalyGvs 283
                 + r++ ++ +++ r + +g + +++g q       +s +nG++mRi+pl++++   +p+++ ++++ea+r TH +++a+++av++a ++a+    g+++  a +       ++ql + +  ++++e+l+++++  es+r                                 ++++  ++ l+  + + +a+ ++ly++ k++d++ e + + +++GgDtdt+a ++Ga++Gal+G s
  MMETSP1325-20131115|7418_1  14 PTRGFPPSAKRVMRAILDGADYRQTGSQPyfpfpGGSFANGGAMRISPLAIAYRHaSPDAMRRACAEACRSTHVHEEAIDGAVVQASAVAYClAVGAQEAGASA-FkpmamLDQLIEVSLTQPMKERLADLKRELESQRgaalsdhapsdlasdgtyenevlgdvaclkrilSTHKRPGSGLSFQIAAIDAMVCVLYCVAKYGDNPLESIYRSISIGGDTDTIASMVGAIVGALHGQS 250
                 6777888889999999999999999998899**99****************998879999999*****************************445554443333.36****88888999999999999999999999999999999999999999*****************999999999*******************************************************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 1320.35
//
Query:       MMETSP1325-20131115|7423_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|7421_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0017   16.9   1.8     0.0021   16.6   1.3    1.1  1  PF03302.8 Giardia variant-specific surface protein
  ------ inclusion threshold ------
      0.055   12.9   0.7      0.094   12.1   0.5    1.4  1  PF09976.4 Uncharacterized protein conserved in bacteria (DUF2133)
       0.27   11.0   1.5       0.41   10.5   1.1    1.2  1  PF09716.5 Malarial early transcribed membrane protein (ETRAMP)


Domain annotation for each model (and alignments):
>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   1.3   4.7e-07    0.0021     321     386 ..      67     133 ..      36     136 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 4.7e-07
   PF03302.8 321 tssesdkgvtGvkdclscappssdkGsvlcyl.ikdsgstnksGlstGaiaGisvavvvvvgGlvGf 386
                 t+  +d    G +d  + ap  +d+G+ +      d+g+   +   +Gai G  vavvvv+gG vG+
  MMETSP1325-20131115|7421_1  67 TDGRTDAQTDGRADAQTDAPADADSGADVATDdGGDGGAKSAAADGSGAIIGAVVAVVVVIGGGVGY 133
                 555566667788999999999999998655430334456666667899******************8 PP

>> PF09976.4  Uncharacterized protein conserved in bacteria (DUF2133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.5   2.1e-05     0.094      16      37 ..     115     136 ..     113     142 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.1e-05
   PF09976.4  16 wiivgavlalagvaGwrgwqky 37 
                 +ii+++v++++ ++G  g++  
  MMETSP1325-20131115|7421_1 115 AIIGAVVAVVVVIGGGVGYKMM 136
                 6777777777777777777654 PP

>> PF09716.5  Malarial early transcribed membrane protein (ETRAMP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.1     9e-05      0.41      59      82 ..     117     140 ..     114     142 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 9e-05
   PF09716.5  59 saiatalallvggalGlgiykkkk 82 
                   ++ a+ +++gg++G+ + kk+k
  MMETSP1325-20131115|7421_1 117 IGAVVAVVVVIGGGVGYKMMKKNK 140
                 4455667779************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 702.09
//
Query:       MMETSP1325-20131115|7424_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 869.98
//
Query:       MMETSP1325-20131115|7426_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-09   37.2   5.7      0.036   13.7   0.1    3.4  3  PF00514.18 Armadillo/beta-catenin-like repeat
     0.0062   16.1   0.0       0.18   11.4   0.0    2.1  2  PF09759.4  Spinocerebellar ataxia type 10 protein domain
  ------ inclusion threshold ------
      0.028   14.8   1.6      0.028   14.8   1.1    2.9  4  PF13513.1  HEAT-like repeat
      0.076   11.9   0.4      0.086   11.7   0.2    1.2  1  PF01829.11 Peptidase A6 family


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0     3e-05       0.1      22      41 .]      12      33 ..       1      33 [. 0.77
   2 !   13.0   0.2   1.8e-05     0.063       2      40 ..      36      76 ..      35      77 .. 0.90
   3 !   13.7   0.1   1.1e-05     0.036      10      40 ..      87     119 ..      78     120 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3e-05
                C..-SSHHHHHHHHHHHHHHHT CS
  PF00514.18 22 k..sgdeevqeeAawALsNLaa 41
                +   +d ++q++A++A++NLa+
  MMETSP1325-20131115|7426_1 12 RahRDDASLQCYACTAVTNLAH 33
                5556899*************95 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.8e-05
                HHHHHHHHHCHHHHHHHHHHC..-SSHHHHHHHHHHHHHHH CS
  PF00514.18  2 penkqavieaGavppLvqLLk..sgdeevqeeAawALsNLa 40
                 +n++++  +Gav+  +q ++    d+++q++A wAL  La
  MMETSP1325-20131115|7426_1 36 ASNREQLAAVGAVDDVLQAMQtwPADPKLQRQASWALLTLA 76
                579999999999999999999999*************9887 PP

  == domain 3    score: 13.7 bits;  conditional E-value: 1.1e-05
                 HCHHHHHHHHHHC..-SSHHHHHHHHHHHHHHH CS
  PF00514.18  10 eaGavppLvqLLk..sgdeevqeeAawALsNLa 40 
                 + G+v + v+ ++   +d +vq   +wAL NL+
  MMETSP1325-20131115|7426_1  87 RKGGVAAIVAAMTncADDASVQHFGCWALANLC 119
                 569*****************************9 PP

>> PF09759.4  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   5.1e-05      0.18       8      64 ..      26      82 ..      19      88 .. 0.87
   2 !    4.3   0.0    0.0084        29      18      65 ..      79     126 ..      72     137 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.1e-05
   PF09759.4  8 rlianltyknkevqdkvreldglaliLsntriDdenPflkEwailairnLlennken 64
                + + nl+++++ + +++   +++  +L++ ++   +P l+ +a +a+  L ++ +++
  MMETSP1325-20131115|7426_1 26 TAVTNLAHNSASNREQLAAVGAVDDVLQAMQTWPADPKLQRQASWALLTLAASDEAA 82
                5789******************************************98887766655 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0084
   PF09759.4  18 kevqdkvreldglaliLsntriDdenPflkEwailairnLlennkenq 65 
                  e+   + + +g+a+i  + +  + ++ ++  + +a+ nL+ + ++ +
  MMETSP1325-20131115|7426_1  79 DEAAARITRKGGVAAIVAAMTNCADDASVQHFGCWALANLCWDVEAVR 126
                 567778889999999999988889999999999999999998877655 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.43   1.5e+03      40      54 ..      16      30 ..       5      31 .. 0.69
   2 ?    4.6   1.0     0.013        46      10      52 ..      27      72 ..      18      75 .. 0.67
   3 ?   14.8   1.1   8.3e-06     0.028       2      55 .]      63     118 ..      62     118 .. 0.79
   4 ?   -2.3   0.1       2.1   7.1e+03       6      13 ..     123     130 ..     122     139 .. 0.58

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.43
   PF13513.1 40 dddeVReaAawALgr 54
                dd++ + +A+ A ++
  MMETSP1325-20131115|7426_1 16 DDASLQCYACTAVTN 30
                666888999988766 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.013
   PF13513.1 10 aLGr.....laggeprllepavpellpaLlelLedddd.eVReaAawAL 52
                a+ +     + ++e+  +  av+++l+a++   + + d + +++A wAL
  MMETSP1325-20131115|7426_1 27 AVTNlahnsASNREQLAAVGAVDDVLQAMQ---TWPADpKLQRQASWAL 72
                443343465666667777778888888888...3355567799999998 PP

  == domain 3    score: 14.8 bits;  conditional E-value: 8.3e-06
   PF13513.1   2 rvRraAawaL...Gr...laggeprllepavpellpaLlelLeddddeVReaAawALgrl 55 
                  ++r+A waL   ++   +   ++ + +  v ++++a++++   dd++V++  +wAL++l
  MMETSP1325-20131115|7426_1  63 KLQRQASWALltlAAsdeA--AARITRKGGVAAIVAAMTNCA--DDASVQHFGCWALANL 118
                 5789999988777444542..356667779999999999999..**************97 PP

  == domain 4    score: -2.3 bits;  conditional E-value: 2.1
   PF13513.1   6 aAawaLGr 13 
                 +A++a++r
  MMETSP1325-20131115|7426_1 123 EAVRAVAR 130
                 57777765 PP

>> PF01829.11  Peptidase A6 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   2.5e-05     0.086     205     269 ..      49     114 ..      20     124 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.5e-05
  PF01829.11 205 spileGvqtlppanvtvaqagm.pfnlaagaeavagftGlGdmdaivikvtaatGavntavlktwa 269
                  ++l+ +qt p+      qa+   ++laa+ ea a++t  G++ aiv  +t  +       +  wa
  MMETSP1325-20131115|7426_1  49 DDVLQAMQTWPADPKLQRQASWaLLTLAASDEAAARITRKGGVAAIVAAMTNCADDASVQHFGCWA 114
                 6899********99999998862679********************99999888766666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 684.67
//
Query:       MMETSP1325-20131115|7427_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-26   93.1   0.0    6.2e-24   84.7   0.0    2.0  1  PF04755.7 PAP_fibrillin


Domain annotation for each model (and alignments):
>> PF04755.7  PAP_fibrillin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.7   0.0   4.5e-28   6.2e-24      22     197 ..       7     149 ..       3     150 .. 0.86

  Alignments for each domain:
  == domain 1    score: 84.7 bits;  conditional E-value: 4.5e-28
   PF04755.7  22 sddraeieelvkklealnptpaplesldlLdGkWrLlYttskellpllarkklpllkvgeiyQtIdvenksvqNsve.lsglpllegsvsvaakfevaspkr.velkFeravlklkkllkglltslqdtasniaraissqlpikfrlsgeeakgwLeitYlDedLRIsRGdeGslfvl 197
                 +++r+++e+ + +lea+npt +pl s   L G+WrL+Yt+s ++l +  r + p+    +i+Q+I++++ + +N    l   +ll    +v+a++e++ + r v ++F+r  ++                         + p++     + a+g Le+tYlD++LRIsRGd+G++fvl
  MMETSP1325-20131115|7427_1   7 KEKRDAVEAKILELEAVNPTAEPLAS-PELTGTWRLVYTSSDSILGI-MR-ARPFRPRPKILQSINAKTLTAKNEEWvLM--GLL--KNQVKADLEPRGDGRtVDVQFKRFGIGW-----------------------LRIPAP-----KSARGVLETTYLDQNLRISRGDKGNTFVL 149
                 6789********************88.789***************66.55.56699999***************988344..444..45789******8766489*****98876.......................234555.....889*************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 810.68
//
Query:       MMETSP1325-20131115|7428_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.42s 00:00:00.65 Elapsed: 00:00:00.46
# Mc/sec: 322.99
//
Query:       MMETSP1325-20131115|7420_1  [L=746]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-44  152.2   0.0    1.4e-44  151.7   0.0    1.2  1  PF07993.7  Male sterility protein
    1.7e-14   53.7   0.0    4.6e-14   52.3   0.0    1.8  1  PF00550.20 Phosphopantetheine attachment site
    3.1e-10   39.7   1.4    1.5e-08   34.3   1.3    2.7  2  PF01370.16 NAD dependent epimerase/dehydratase family
    5.8e-08   31.6   0.9    1.9e-06   26.6   0.6    2.1  1  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family
      0.003   16.3   0.0     0.0066   15.2   0.0    1.5  1  PF02719.10 Polysaccharide biosynthesis protein


Domain annotation for each model (and alignments):
>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.7   0.0   5.3e-48   1.4e-44       1     248 [.      99     425 ..      99     426 .. 0.93

  Alignments for each domain:
  == domain 1    score: 151.7 bits;  conditional E-value: 5.3e-48
   PF07993.7   1 lTGaTGfLGkvllekllrtqpevkiyllvRaksgesaleRleeelekkelfsallk......elaerikvvegDlseprlgLseedlqelaeevdviihsAAtvnfeepykellrtNvlGtrevlelakklkklvllhvST.avvageregeveekvye..............................................................................eeederaklkglpntYt..qsKalaEklvreasrrsglpv..viiRpsiivgesetGwiegsdlgldgllggvakgvlpeilgdpearldlvpvDyvana 248
                 lTGaTGfLG vll +llr++++ +i+++vRa+++++al R+++e ek+  ++++ +      + +++++++++D+s p lgL+++++++l++++dv+ih AA vn+  py+e  ++Nv+Gt e+l+ a+   + ++++vS+ av+++++++       +                                                                              + +  +++   lp  Y+  qsK ++E lv+ a+ ++++    +i+R + i  +s + + +  d++l++l +g++ ++lp + +d+  +ld +p+D+v  a
  MMETSP1325-20131115|7420_1  99 LTGATGFLGPVLLVELLRRESR-QITCVVRAADNDEALLRVRRETEKAAGPNDV-ElvrrafDDTRQVVAIAADISVPSLGLDATAYEDLSRSIDVVIHAAAYVNHAMPYSEHAEANVNGTLELLRVAS-YCQAAFHYVSSlAVISKADRSAA-----PggrvaeeliplpsmlrtsaddaaaavagvrshspylrshsrsslspfvvlacpsphsyctlmfisprlasprlaslklALDPRPRSYPRLPSPYVdaQSKRVGEILVQVAAAAGHIAGdsAIHRAGLIGPSSASACGNDVDVLLRTLAAGAKLRALPAFASDA--TLDYTPADWVGAA 425
                 8******************998.*************************999999.55999999999***************************************************************.55679*******99988777543.....12233357777********************************************************************999*************6559*************999998455*************************************999995..7********9766 PP

>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.0   1.7e-17   4.6e-14       1      67 []     490     557 ..     490     557 .. 0.95

  Alignments for each domain:
  == domain 1    score: 52.3 bits;  conditional E-value: 1.7e-17
  PF00550.20   1 eklleivaevlg.ldpdeidldtdlfelGlDSllaveliarleeefgveipvedlfelptlaelaayl 67 
                 +++l++v+++ g  +++ id++++l e+GlDSl +++l+ +l++e+ v+++++ l+++pt  +la +l
  MMETSP1325-20131115|7420_1 490 QQVLAAVRSLMGaEADHAIDPHAPLVEYGLDSLGSMQLVLQLRRELEVQLSLTILYDYPTADALAGHL 557
                 6899*******98666999**********************************************997 PP

>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   1.3   5.3e-12   1.5e-08       1     123 [.      97     243 ..      97     257 .. 0.81
   2 ?   -2.0   0.0      0.61   1.7e+03     156     184 ..     638     664 ..     629     679 .. 0.73

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 5.3e-12
                 EEEE--------HHHHHHHHH-TEEE..EESSCSTCCCCCCHHH......................TBEEEB--TT-HHHHHHHHHHH....T.SEEEE--S---HHHCCCSHHHHHHHHT---HHHHHHHHHHTT.EEEEEEEGGG---B CS
  PF01370.16   1 ilVtGatGfiGsalveallekgyevv..nlirrtrseslatvri......................rvelveldltdkdalerlfaee....qpdaVihlAaesgvdassedpadfieanvegtlnlleaarkagvkrflfasSsevygkd 123
                 +l+tGatGf+G  l+ +ll++  + +  ++  +++ e+l +vr+                      +v  + +d++ ++   +++a e    ++d+Vih+Aa++   + +   ++ +eanv+gtl+ll++a+ +++  f+++sS +v  k 
  MMETSP1325-20131115|7420_1  97 VLLTGATGFLGPVLLVELLRRESRQItcVVRAADNDEALLRVRRetekaagpndvelvrrafddtrQVVAIAADISVPSLGLDATAYEdlsrSIDVVIHAAAYV--NHAM-PYSEHAEANVNGTLELLRVASYCQA-AFHYVSSLAVISKA 243
                 799********************95557555555666555555578888888999999999999998888999999666666666666699999********95..4455.5677899**************9999.*******8887665 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.61
                 HHHT-EEEEEEESEEE-TT...-SHHCHH CS
  PF01370.16 156 eeyglnaiilrlfnvyGprnfdeevshvi 184
                 ++   + ++lrl ++ +p+  +e +++v+
  MMETSP1325-20131115|7420_1 638 AAGAARPTNLRLYHLLSPH--HEVSAQVL 664
                 556678999*********9..44444444 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.6   7.1e-10   1.9e-06       1     122 [.      98     242 ..      98     251 .. 0.73

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 7.1e-10
  PF01073.14   1 lVtGgsGFlGrrlvreLlelee...lkevrvld.................lrespelleelsklqvkt............vlegDv......tdkekleealegvdvvihtaaiidvlgkaerdeilkvnvkGTqnvleacvkagvrvlvYtSsaevvgp 122
                 l tG++GFlG  l  eLl++e+      vr +d                      +  e                     ++ +D+      +d+   e   +++dvvih aa+++ +  +++    + nv+GT ++l  + +++  ++ Y+Ss  v+ +
  MMETSP1325-20131115|7420_1  98 LLTGATGFLGPVLLVELLRRESrqiTCVVRAADndeallrvrretekaagP----NDVE--------LvrrafddtrqvvAIAADIsvpslgLDATAYEDLSRSIDVVIHAAAYVNHAMPYSE--HAEANVNGTLELLRVASYCQA-AFHYVSSLAVISK 242
                 67*****************99843334589999999997765544422221....2222........1223334455666889999444444477788888899*********9998875555..59****************995.789*******976 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   2.4e-06    0.0066       1     120 [.      97     229 ..      97     249 .. 0.65

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 2.4e-06
  PF02719.10   1 vlvtGagGsiGselvrqilkkkpkkiill...erdElklyeieke............leeelkkeklkveivpvigdvr......dkerleealeelkvdvvfhaAAlKhVPlveenpleavktNvlgtenvieaaieagv 120
                 vl+tGa+G +G  l+ ++l+++ ++i  +     ++ +l ++++e             ++ +++     ++v++ +d+       d++  e++ +  ++dvv+haAA+ +  +      e  + Nv gt +++++a  ++ 
  MMETSP1325-20131115|7420_1  97 VLLTGATGFLGPVLLVELLRRESRQITCVvraADNDEALLRVRREtekaagpndvelVRRAFDD---TRQVVAIAADISvpslglDATAYEDLSR--SIDVVIHAAAYVNHAM---PYSEHAEANVNGTLELLRVASYCQA 229
                 899*****************99888865512233455677777775666665433321111111...2345677778762222224444444444..9*********965333...34566788*******9999988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (746 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.97u 0.48s 00:00:01.45 Elapsed: 00:00:00.57
# Mc/sec: 3082.21
//
Query:       MMETSP1325-20131115|7429_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-23   80.8   2.4    7.3e-23   80.7   1.7    1.0  1  PF08449.6  UAA transporter family
    1.7e-06   27.6   5.1    2.2e-06   27.3   3.5    1.0  1  PF03151.11 Triose-phosphate Transporter family
    5.3e-06   26.3   5.8    6.7e-06   26.0   4.0    1.1  1  PF00892.15 EamA-like transporter family
     0.0063   16.4   6.3      0.023   14.6   4.6    1.7  1  PF04657.8  Protein of unknown function, DUF606
  ------ inclusion threshold ------
      0.011   15.2  10.7      0.013   15.0   7.4    1.1  1  PF01027.15 Inhibitor of apoptosis-promoting Bax1
      0.093   12.6   6.4       0.41   10.6   4.4    1.8  1  PF09685.5  Tic20-like protein
       0.11   11.7   1.6       0.15   11.2   1.1    1.2  1  PF00924.13 Mechanosensitive ion channel
       0.24   11.4   7.6       0.31   11.1   5.3    1.1  1  PF13536.1  Multidrug resistance efflux transporter
       0.33   10.6   7.3        1.6    8.4   5.1    1.9  1  PF07456.6  Heptaprenyl diphosphate synthase component I
       0.39    8.9   7.4       0.46    8.7   5.1    1.2  1  PF13347.1  MFS/sugar transport protein
       0.64    9.9   5.3        1.4    8.9   3.6    1.8  1  PF14256.1  YwiC-like protein
        2.3    7.5   7.7        3.5    6.9   5.3    1.3  1  PF01988.14 VIT family


Domain annotation for each model (and alignments):
>> PF08449.6  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   1.7   6.4e-26   7.3e-23     181     296 ..       2     117 ..       1     121 [] 0.93

  Alignments for each domain:
  == domain 1    score: 80.7 bits;  conditional E-value: 6.4e-26
   PF08449.6 181 gksskemlfyshllslpfflllllsiktgelasavsfllkhps..vlfylllnsltqyvgikfvflliaefgaltvtlvttlRKfvslllSvllFgnpltlqqwlGvllVflgillka 296
                 +++++em+f+s++ +++++ll+ +   tge+ + ++f+ +h    + +++++++ +++ g+++v +l+++fgalt++l tt+RK++++llS+++F +p+ + ++lG++l ++++++++
  MMETSP1325-20131115|7429_1   2 QSDEEEMIFMSYAGGSLVLLLICMA--TGEMSEGLAFIDQHGAsrINLVIFIYAACGFCGVSCVAALTKRFGALTAALTTTARKAITILLSFFIFPKPFVFGHVLGAVLFISSLVARS 117
                 56889********************..************98764488889999********************************************************999998876 PP

>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   3.5   1.9e-09   2.2e-06      46     149 ..      17     114 ..       3     116 .. 0.77

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 1.9e-09
  PF03151.11  46 afivllvvlllvegpklgkesssiksldlssivryvlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGvv 149
                 ++++ll+++ + e ++   ++++      +  +r+ l++++ + + f+   +   l +r+ +lt+  + ++ ++++i+ls++if +++ f  +lG ++ +  +v
  MMETSP1325-20131115|7429_1  17 SLVLLLICMATGEMSEGLAFIDQH-----G-ASRINLVIFIYAACGFCGVSCVAALTKRFGALTAALTTTARKAITILLSFFIFPKPFVFGHVLGAVLFISSLV 114
                 233344444444444433344432.....2.56999*************************************************************9998765 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   4.0   5.9e-09   6.7e-06      22     122 ..       8     114 ..       3     117 .. 0.83

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 5.9e-09
  PF00892.15  22 itayrlliagillilllfllrep........ialislkdilallllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvl 122
                 + ++ +  +++  +lll++   +        i ++  + i  ++++ + ++++g+ + + + k+ +a +a+l t++  ++tills++++ +++ + ++lg+vl + +++
  MMETSP1325-20131115|7429_1   8 MIFMSYAGGSL--VLLLICMATGemseglafIDQHGASRINLVIFIYAACGFCGVSCVAALTKRFGALTAALTTTARKAITILLSFFIFPKPFVFGHVLGAVLFISSLV 114
                 55666666663..33333333333467988888888889999999999*******************************************************998875 PP

>> PF04657.8  Protein of unknown function, DUF606
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   4.6     2e-05     0.023      35     103 ..      10      85 ..       6     115 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2e-05
   PF04657.8  35 lvsflvGtivllllllltrkp.......klaalksapwwallGGllGavfvtlaillvpklGaaltvvlvlaGqll 103
                 ++s++ G +vlll++++t++        + + +++++ ++++  ++G + v ++++l++++Ga ++ + + a   +
  MMETSP1325-20131115|7429_1  10 FMSYAGGSLVLLLICMATGEMseglafiDQHGASRINLVIFIYAACGFCGVSCVAALTKRFGALTAALTTTARKAI 85 
                 89*****************86676776666667788**************************99887766654444 PP

>> PF01027.15  Inhibitor of apoptosis-promoting Bax1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   7.4   1.1e-05     0.013      67     165 ..      18     114 ..       7     120 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.1e-05
  PF01027.15  67 lallllllytlleGltlgpillvytgsivlqafllTaavfgglslyalttkrdlsflggfllmgli.glivaslvniflpssalelli.saigvllfs.gli 165
                 l lll+   t+ ++  l+ i +++++ i l  f++ a+ f+g s++a++tkr +  l + l++    ++ ++  ++if       +++  ++g++lf   l+
  MMETSP1325-20131115|7429_1  18 LVLLLICMATGEMSEGLAFIDQHGASRINLVIFIYAACGFCGVSCVAALTKR-FGALTAALTTTARkAITILLSFFIF----PKPFVFgHVLGAVLFIsSLV 114
                 33555555566666666667777778999999********************.9999999976666344444444466....44467766999999984444 PP

>> PF09685.5  Tic20-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.4   0.00036      0.41      16      66 ..      13      90 ..       4     118 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00036
   PF09685.5 16 lllgfigplivwllkkdk...spfvrehakealnfqislliygvvlgvlslll........................l 66
                  +g +++l++ ++  +     +f+++h++  +n+ i++ +++  +gv ++                           
  MMETSP1325-20131115|7429_1 13 YAGGSLVLLLICMATGEMsegLAFIDQHGASRINLVIFIYAACGFCGVSCVAAltkrfgaltaaltttarkaitillS 90
                45666666666666655412357*************************999997777777777777776666654331 PP

>> PF00924.13  Mechanosensitive ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.1   0.00013      0.15       7      64 ..      45     101 ..      41     107 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00013
  PF00924.13   7 liivvgilivlsllgvn.vsallavlGalglalglalqdlisnlvaGiillfekpfkiG 64 
                 +++v++i+++  + gv+ v+al+  +Gal +al+  +++ i  l++ +  +f kpf +G
  MMETSP1325-20131115|7429_1  45 INLVIFIYAACGFCGVScVAALTKRFGALTAALTTTARKAITILLSFF--IFPKPFVFG 101
                 6789**************************************999954..466666666 PP

>> PF13536.1  Multidrug resistance efflux transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   5.3   0.00027      0.31      10      97 ..      18     109 ..      10     116 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00027
   PF13536.1  10 lflllivllrkrlkellrelkrnpll....wlllagllgfglfyalltlAakhap.g.lvaaital.tpllaallslllfkeklpkrellaslli 97 
                 l+llli ++ ++  e l  + +++      +++ ++ +gf      +++Aa   + g l+aa+t +   ++++lls ++f + + +  +l ++l 
  MMETSP1325-20131115|7429_1  18 LVLLLICMATGEMSEGLAFIDQHGASrinlVIFIYAACGF---CGVSCVAALTKRfGaLTAALTTTaRKAITILLSFFIFPKPFVFGHVLGAVLF 109
                 7899999*********999999999933332444444444...88899999998776577776666699**************999877776654 PP

>> PF07456.6  Heptaprenyl diphosphate synthase component I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.1    0.0014       1.6      90     144 ..      52     107 ..       5     111 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0014
   PF07456.6  90 kkkvslvgiSilgavahnlgQlivasllvksksvflylPvlll.lgiitGlviGll 144
                    ++++g+S+++a+++ +g l+ a + +  k+++++l ++++    ++G v+G++
  MMETSP1325-20131115|7429_1  52 YAACGFCGVSCVAALTKRFGALTAALTTTARKAITILLSFFIFpKPFVFGHVLGAV 107
                 24589**********************************99883457778887776 PP

>> PF13347.1  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   5.1    0.0004      0.46     260     326 ..      44     110 ..       8     115 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0004
   PF13347.1 260 lvkllaligtiaallalplipflakklgkkkifflglaiaiigylllfflsteniwlllivvvvagl 326
                  ++l+++i   ++++++ ++  l+k++g  ++++   a  +i  ll+ff++++ +++  ++ +v ++
  MMETSP1325-20131115|7429_1  44 RINLVIFIYAACGFCGVSCVAALTKRFGALTAALTTTARKAITILLSFFIFPKPFVFGHVLGAVLFI 110
                 457888899******************************************8777766666666655 PP

>> PF14256.1  YwiC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.6    0.0012       1.4      26     105 ..      45     120 ..      13     121 .] 0.67

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0012
   PF14256.1  26 ahlllllawlflylarfplllllkarrkkrarylrwllvYgalallllllalllapgllwlalla.lplvavalyaalrkr 105
                   l++++ + ++++  + ++ l+     kr  +l+++l+  a  ++ +ll ++  p++++++ ++ ++l++ +l+a++r+r
  MMETSP1325-20131115|7429_1  45 INLVIFIYAACGFCGVSCVAALT-----KRFGALTAALTTTARKAITILLSFFIFPKPFVFGHVLgAVLFISSLVARSRQR 120
                 33334444444555544444444.....455699****************************9655999999999998887 PP

>> PF01988.14  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   5.3    0.0031       3.5     138     210 ..       9      93 ..       7      95 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0031
  PF01988.14 138 sglsfllggliPllpyllvp.sas............eallvsvivtllaLfllGvvkarvsgksylrsalrtliigllaaaatyll 210
                 +++s++ g+l+ ll  +++    s            +  lv++i +++ ++ + +v+a   + + l +al t++  ++++++++++
  MMETSP1325-20131115|7429_1   9 IFMSYAGGSLVLLLICMATGeM-SeglafidqhgasRINLVIFIYAACGFCGVSCVAALTKRFGALTAALTTTARKAITILLSFFI 93 
                 89****************9751.346678999999777788888888889999999999999*********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       617  (0.0451287); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 547.09
//
Query:       MMETSP1325-20131115|7431_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|7433_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-14   51.7   0.0    8.1e-14   51.3   0.0    1.2  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase
  ------ inclusion threshold ------
       0.14   11.6   0.1       0.18   11.3   0.0    1.1  1  PF07467.6  Beta-lactamase inhibitor (BLIP)


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   1.2e-17   8.1e-14       4      93 ..      49     144 ..      46     145 .. 0.89

  Alignments for each domain:
  == domain 1    score: 51.3 bits;  conditional E-value: 1.2e-17
                 ---CT-EEEEEEEEEE.---EEEETTTTTCEEEEE...CCTTSS-HHHHHHHTTSBCTEEEEEEEEGGGT-S-TTCCTTT....S.TT-EEEEEEEE CS
  PF00254.23   4 kakegdtVtvhyegkledgtvfdssysrakpfefk...vGsgqvikgleeglegmkvGekrtltippelaYgekglaggk....ippnatlvfevel 93 
                 ka  gd + v +++ + +g vfd+  +  +p+ ++   vG+g++ikg+++ l  mkvGe+r+ ++p  +a+gekg  ++     ippna++ +  el
  MMETSP1325-20131115|7433_1  49 KARLGDLAGVRFKCAY-KGVVFDDILEAPEPYFMRvtpVGEGPLIKGIYDVLPDMKVGEQRQMIVPGAMAFGEKGRPPSPgkprIPPNADIDYILEL 144
                 4899************.**********9999988633379************************************655499********9998776 PP

>> PF07467.6  Beta-lactamase inhibitor (BLIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.6e-05      0.18       6      69 ..       6      73 ..       1      81 [. 0.75

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.6e-05
                XXXXXXXXXXXXX.XXXXXXXXX-----..--HHHHS----B.HHHHHHH---T.TEE--------EE CS
   PF07467.6  6 raavalaaaagav.latassanaasgft..aekyeqiqfGmt.rdevleiaGaeaacetggsigdsil 69
                 +a+++aa  +av  + ++++ a+ g+t  + +y  i+ G   + ++ ++aG   +c  +g++ d il
  MMETSP1325-20131115|7433_1  6 VSAISVAAGVSAVgFGPTAASAATEGVTknGVQYRIIKEGKGeKARLGDLAGVRFKCAYKGVVFDDIL 73
                567777775555536777777888888733569*******86156778****************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 787.37
//
Query:       MMETSP1325-20131115|7432_1  [L=939]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (939 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.31u 0.37s 00:00:01.68 Elapsed: 00:00:00.65
# Mc/sec: 3461.81
//
Query:       MMETSP1325-20131115|7434_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.042   14.1   0.0      0.043   14.0   0.0    1.0  1  PF00581.15 Rhodanese-like domain


Domain annotation for each model (and alignments):
>> PF00581.15  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.2e-06     0.043      69     112 ..      10      48 ..       3      49 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 3.2e-06
  PF00581.15  69 tvvvycssgnrsggaaalllalilkelgyknvyvLdGGfeawka 112
                 + +v c++g +s+ a +l     l++ g +    ++GG++aw++
  MMETSP1325-20131115|7434_1  10 PLYVICRRGVASKAAVRL-----LAQSGINGAVDINGGLSAWAS 48 
                 56899*999999999999.....9999***************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|7430_1  [L=610]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   14.9   0.5      0.018   14.9   0.3    6.3  9  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        0.5    9.7   4.5        4.5    6.6   2.0    2.7  2  PF11178.3  Protein of unknown function (DUF2963)
        7.7    6.2  25.3       0.25   10.9   0.7    6.2  6  PF02183.13 Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.3     4e-06     0.018      48     100 ..      95     147 ..      88     151 .. 0.93
   2 ?    4.1   3.7    0.0087        40      25      99 ..     178     254 ..     162     258 .. 0.78
   3 ?    6.6   7.8    0.0014       6.5       9      98 ..     200     290 ..     194     295 .. 0.86
   4 ?    1.0   8.1     0.082   3.7e+02      24     103 ..     261     341 ..     253     344 .. 0.80
   5 ?   -0.5   6.1      0.25   1.1e+03      21     104 ..     306     390 ..     293     394 .. 0.58
   6 ?    0.4   2.2      0.13   5.8e+02      29      98 ..     356     435 ..     345     440 .. 0.42
   7 ?    2.5   4.1     0.027   1.3e+02      44     100 ..     433     472 ..     394     484 .. 0.49
   8 ?    5.5   7.0    0.0032        15      15      98 ..     435     515 ..     425     519 .. 0.83
   9 ?    6.6   2.3    0.0014       6.6      40      97 ..     495     551 ..     488     558 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 4e-06
                 HHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  48 lqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelekl 100
                 l+++ Ne+++eI+k+ ++ +   +  ++   ++++ +al++e+++le  l ++
  MMETSP1325-20131115|7430_1  95 LRQKVNEITAEIAKLEAEAKTHMSDQNNHSRMNNKAEALDKEVRTLEGTLADY 147
                 89*********************************************999876 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0087
                 HHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT...HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  25 kedvdel.leldeerrelqveleelqaerNelskeIgkakkkk.edaeeliaevkelkeelkaleaelkeleaelek 99 
                 + ++d + l+ ++e +++q   e++   + + +++I  +  ++ e+ ++l++e+ +l+++ ++ +a+++++ +++  
  MMETSP1325-20131115|7430_1 178 AREIDMVfLAKQQEEKAIQGIEEQIEMTHRKNQEKINAMEPAQaEQYKALVQESVALQDQCAQHQAQIDQVADQVAM 254
                 5555554155566667777777788899999999999999888899999******************9999998765 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0014
                 H-HHHHHHHHHH-...TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17   9 enpeavkeklkkRg..edkedvdelleldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaele 98 
                 e++e +++k +++    ++++ ++  +l +e  +lq +  + qa+  +++ +++ + ++  d + l +e ++l  +  +l+ +l++le+e e
  MMETSP1325-20131115|7430_1 200 EQIEMTHRKNQEKInaMEPAQAEQYKALVQESVALQDQCAQHQAQIDQVADQVAMLTAQR-DGNTLNKEFRQLESQQIKLTRQLQNLEEEAE 290
                 5555555554444436778999***********************************997.999***********************99865 PP

  == domain 4    score: 1.0 bits;  conditional E-value: 0.082
                 THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT....HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
  PF02403.17  24 dkedvdelleldeerrelqveleelqaerNelskeIgkakkkk..edaeeliaevkelkeelkaleaelkeleaelekllls 103
                  + + +e+ +l++++ +l  +l++l +e  e++k   k +++k   ++++  +++k++  ++k++ ae +++e+ l +l + 
  MMETSP1325-20131115|7430_1 261 GNTLNKEFRQLESQQIKLTRQLQNLEEEA-EVAKLDPKEMQAKmlAKVKADTDKSKSMDLQIKDMRAENRKAEQVLSELTQD 341
                 456678999****************9988.6666666666666677788888999999999999999999999999988765 PP

  == domain 5    score: -0.5 bits;  conditional E-value: 0.25
                 -.TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT.....HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS CS
  PF02403.17  21 RgedkedvdelleldeerrelqveleelqaerNelskeIgkakkkk...edaeeliaevkelkeelkaleaelkeleaeleklllsi 104
                 +   k+d d+  ++d + + +++e  ++ +   el++ +   ++ +    + e+l ++ +e++e +++ +++  e+++++e+  ++i
  MMETSP1325-20131115|7430_1 306 K--VKADTDKSKSMDLQIKDMRAENRKAEQVLSELTQDLNDRSNGNnekDKYEKLYQRDREMSEFIDTFDQTQGEIRNDQESTQSNI 390
                 3..334444444444444444444444444444444444433332233355789999999999999999999999999998887776 PP

  == domain 6    score: 0.4 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHHHHHHHHHHH...........HHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  29 delleldeerrelqveleelq...........aerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaele 98 
                 ++l + d+e+ e + ++++ q           ++   l ++I++  ++ e     +++  e+k+e   +e +l+  +a ++
  MMETSP1325-20131115|7430_1 356 EKLYQRDREMSEFIDTFDQTQgeirndqestqSNIVGLLEHISSGLES-EGSMPSKERLSEMKDEATFKERQLESSQATMQ 435
                 334444444444433333333000000000003333333333333322.45555666666666666666666666666665 PP

  == domain 7    score: 2.5 bits;  conditional E-value: 0.027
                 HHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  44 eleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelekl 100
                 ++++lq+                 ++++ +ae++++++  ++++ el+ l+a+++++
  MMETSP1325-20131115|7430_1 433 TMQRLQQ-----------------ERTQRVAEMEKIQNLDEKIKIELSSLQAKMDSM 472
                 2222222.................223333333333333333333333333333322 PP

  == domain 8    score: 5.5 bits;  conditional E-value: 0.0032
                 HHHHHH-.TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  15 keklkkRgedkedvdelleldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaele 98 
                 ++ +++R + +++++++  lde   ++++el +lqa+  ++  e+g+  + +  +++ +++   l+++l+ ++++ k+ +++++
  MMETSP1325-20131115|7430_1 435 QRLQQERTQRVAEMEKIQNLDE---KIKIELSSLQAKMDSMKSEMGQFDDIEGLRQRALESKTYLQQQLDSYQKRTKTSKEQVK 515
                 4555666666666666666666...6899***********************9********************99999999886 PP

  == domain 9    score: 6.6 bits;  conditional E-value: 0.0014
                 HHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  40 elqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleael 97 
                  lq++l++ q++ ++  ++++ ++++ e a++ + e+ e   +l+ le++l++  +++
  MMETSP1325-20131115|7430_1 495 YLQQQLDSYQKRTKTSKEQVKGLSAAYEGAKKQL-ESSETHSRLESLEKKLRTYAQNI 551
                 5899********************9997777666.88899999********9988776 PP

>> PF11178.3  Protein of unknown function (DUF2963)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.047   2.2e+02      36      45 ..     166     175 ..     162     181 .. 0.66
   2 ?    6.6   2.0   0.00099       4.5      17      48 ..     349     380 ..     341     382 .. 0.79

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.047
   PF11178.3  36 sIeEyD.dtge 45 
                 +I+EyD  + +
  MMETSP1325-20131115|7430_1 166 YIREYDaRN-K 175
                 788888433.3 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.00099
   PF11178.3  17 qtgkliKrtnYqddgktinsIeEyDdtgekiK 48 
                 ++ k   ++ Yq d +  ++I+ +D+t+ +i+
  MMETSP1325-20131115|7430_1 349 NNEKDKYEKLYQRDREMSEFIDTFDQTQGEIR 380
                 4444455677***************9999987 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.089   4.1e+02      10      27 ..      95     112 ..      93     116 .. 0.53
   2 ?   -2.2   0.0      0.67   3.1e+03      21      39 ..     130     141 ..     121     149 .. 0.57
   3 ?    0.5   0.1     0.096   4.4e+02      19      36 ..     222     239 ..     221     254 .. 0.69
   4 ?    4.5   1.2    0.0057        26      15      42 ..     262     289 ..     258     292 .. 0.89
   5 ?    1.7   0.3     0.041   1.9e+02      22      41 ..     456     475 ..     445     478 .. 0.63
   6 ?   10.9   0.7   5.5e-05      0.25       4      28 ..     564     588 ..     564     596 .. 0.94

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.089
  PF02183.13  10 LKrnydaLkaendsLqkE 27 
                 L+++ + ++ae  +L++E
  MMETSP1325-20131115|7430_1  95 LRQKVNEITAEIAKLEAE 112
                 555555555555555554 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.67
  PF02183.13  21 ndsLqkEkekLraevlsLk 39 
                  ++       L +ev +L 
  MMETSP1325-20131115|7430_1 130 AEA-------LDKEVRTLE 141
                 344.......555555554 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.096
  PF02183.13  19 aendsLqkEkekLraevl 36 
                 +++++L +E  +L+ + +
  MMETSP1325-20131115|7430_1 222 EQYKALVQESVALQDQCA 239
                 677777777777776654 PP

  == domain 4    score: 4.5 bits;  conditional E-value: 0.0057
  PF02183.13  15 daLkaendsLqkEkekLraevlsLkekl 42 
                 ++L+ e++ L+++  kL  +++ L e++
  MMETSP1325-20131115|7430_1 262 NTLNKEFRQLESQQIKLTRQLQNLEEEA 289
                 7999*****************9999875 PP

  == domain 5    score: 1.7 bits;  conditional E-value: 0.041
  PF02183.13  22 dsLqkEkekLraevlsLkek 41 
                 ++ + E ++L+a + s+k++
  MMETSP1325-20131115|7430_1 456 EKIKIELSSLQAKMDSMKSE 475
                 44556666666666666655 PP

  == domain 6    score: 10.9 bits;  conditional E-value: 5.5e-05
  PF02183.13   4 ErDYelLKrnydaLkaendsLqkEk 28 
                 E DYe LK+n+ ++ ++  +L kE+
  MMETSP1325-20131115|7430_1 564 ETDYESLKNNCVNICSNLNNLAKEN 588
                 89**********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2319  (0.169617); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                        38  (0.0027794); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 2.51u 0.38s 00:00:02.88 Elapsed: 00:00:01.09
# Mc/sec: 1341.08
//
Query:       MMETSP1325-20131115|7435_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 1308.78
//
Query:       MMETSP1325-20131115|7438_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       526  (0.0384728); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1048.41
//
Query:       MMETSP1325-20131115|7437_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 678.21
//
Query:       MMETSP1325-20131115|7439_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.78    9.0   4.7        1.1    8.5   3.3    1.2  1  PF10500.4 Nuclear RNA-splicing-associated protein
        2.2    8.6   8.3        1.3    9.4   2.3    2.6  2  PF07863.6 Homologues of TraJ from Bacteroides conjugative transposon


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.3   0.00016       1.1      60      75 ..      66      81 ..      26      90 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00016
   PF10500.4 60 ssssssssssssssss 75
                s   sssssssssss 
  MMETSP1325-20131115|7439_1 66 SYAHSSSSSSSSSSSA 81
                3333333333333332 PP

>> PF07863.6  Homologues of TraJ from Bacteroides conjugative transposon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.081   5.5e+02      42      53 ..      37      48 ..      16      56 .. 0.49
   2 ?    9.4   2.3   0.00018       1.3      30      59 ..      62      91 ..      57     104 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.081
   PF07863.6 42 savtgskagagv 53
                ++ t++ a+a+v
  MMETSP1325-20131115|7439_1 37 ASSTMATAAAAV 48
                221222222222 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00018
   PF07863.6 30 rkvnstakragssavtgskagagvagaalG 59
                + vns a+++ ss+ + s+aga++a+a++ 
  MMETSP1325-20131115|7439_1 62 QVVNSYAHSSSSSSSSSSSAGAAGAAAVMA 91
                679***********9999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       689  (0.050395); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 827.42
//
Query:       MMETSP1325-20131115|7441_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 746.56
//
Query:       MMETSP1325-20131115|7445_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.087   12.7   0.4       0.12   12.2   0.3    1.2  1  PF10690.4 Myticin pre-proprotein from the mussel


Domain annotation for each model (and alignments):
>> PF10690.4  Myticin pre-proprotein from the mussel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   8.9e-06      0.12       2      27 ..      21      44 ..      20      53 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 8.9e-06
   PF10690.4  2 kaavlLavvvavlvavqeaeavsCas 27
                kaav+ av+vav v v+ea+  sC +
  MMETSP1325-20131115|7445_1 21 KAAVVAAVAVAV-VCVTEADR-SCQT 44
                89******9997.6899**99.7753 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       603  (0.0441047); expected 273.4 (0.02)
Passed bias filter:                      465  (0.0340111); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 314.01
//
Query:       MMETSP1325-20131115|7444_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-19   68.3  10.5    1.3e-11   43.9   0.2    2.4  2  PF00397.21 WW domain
     0.0026   17.2   0.9      0.004   16.6   0.0    1.7  2  PF13464.1  Domain of unknown function (DUF4115)
  ------ inclusion threshold ------
       0.04   13.5   2.3        2.9    7.5   0.4    2.1  2  PF12712.2  Domain of unknown function (DUF3805)
      0.044   13.1   1.3      0.058   12.7   0.9    1.2  1  PF13360.1  PQQ-like domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   0.2   3.9e-15   1.3e-11       4      31 .]      13      39 ..      11      39 .. 0.92
   2 !   28.0   3.1   3.8e-10   1.3e-06       4      31 .]      66      93 ..      63      93 .. 0.90

  Alignments for each domain:
  == domain 1    score: 43.9 bits;  conditional E-value: 3.9e-15
                SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  4 gWeersddddGrvYYyNheTgetqWekP 31
                 Wee++d d G vY+yN+e+get+W++P
  MMETSP1325-20131115|7444_1 13 AWEEVVDAD-GAVYFYNTESGETTWDRP 39
                5**999888.*****************9 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 3.8e-10
                S.EEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  4 g.WeersddddGrvYYyNheTgetqWekP 31
                + We+++d + G  Y+yN  Tg+++We P
  MMETSP1325-20131115|7444_1 66 QkWEQADDGE-GNFYWYNSDTGVSSWEYP 93
                44**999888.****************88 PP

>> PF13464.1  Domain of unknown function (DUF4115)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.2e-06     0.004       4      32 ..       8      36 ..       6      43 .. 0.84
   2 ?   -1.4   0.1      0.48   1.6e+03      33      33 ..      56      56 ..      47      76 .. 0.59

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.2e-06
   PF13464.1  4 vavadsWveVrdadGkvlfegvlkaGesf 32
                 a+ad+W eV dadG+v f+++    +++
  MMETSP1325-20131115|7444_1  8 LARADAWEEVVDADGAVYFYNTESGETTW 36
                589***************99987666666 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.48
   PF13464.1 33 e 33
                +
  MMETSP1325-20131115|7444_1 56 A 56
                3 PP

>> PF12712.2  Domain of unknown function (DUF3805)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0025       8.7      16      36 ..      11      31 ..       6      37 .. 0.86
   2 ?    7.5   0.4   0.00084       2.9      17      36 ..      66      85 ..      52      92 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0025
   PF12712.2 16 psdwkefedgedsflfynpdk 36
                 + w+e  d++++  fyn + 
  MMETSP1325-20131115|7444_1 11 ADAWEEVVDADGAVYFYNTES 31
                578***************885 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.00084
   PF12712.2 17 sdwkefedgedsflfynpdk 36
                ++w++ +dge+ f +yn d+
  MMETSP1325-20131115|7444_1 66 QKWEQADDGEGNFYWYNSDT 85
                68***************996 PP

>> PF13360.1  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.9   1.7e-05     0.058      81     149 ..      17      93 ..       4      95 .] 0.73

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.7e-05
   PF13360.1  81 vvtadnslvaldaetGkllWssqlrsepiarlrssaspaiagdrvivgfs.........sgklvaldlktGkvlWerp 149
                 vv+ad++++ +++e+G++ W + ++  +  +   +a + +ag++++              g+ + ++  tG   We+p
  MMETSP1325-20131115|7444_1  17 VVDADGAVYFYNTESGETTWDRPDGL-EGGGGGMAAGASWAGEEIVTDDGqkweqaddgEGNFYWYNSDTGVSSWEYP 93 
                 6789999999********99955544.444433333344446666665556666667779999999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 484.37
//
Query:       MMETSP1325-20131115|7443_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-31  107.5   0.9    1.9e-31  107.4   0.6    1.0  1  PF01200.13 Ribosomal protein S28e


Domain annotation for each model (and alignments):
>> PF01200.13  Ribosomal protein S28e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.4   0.6   1.4e-35   1.9e-31       6      69 .]       3      65 .]       1      65 [] 0.96

  Alignments for each domain:
  == domain 1    score: 107.4 bits;  conditional E-value: 1.4e-35
                --EE.EEEEEE----------EEEEEEE-------EEEEEEE-------EEEES-SS------- CS
  PF01200.13  6 ekvklaeVikvlgrtGsrGevtqVrvkllegdkgRiiiRNVkGPvregDilsLleteReArrlr 69
                ++vkla+V +vlgrtG +G+vtqVrv+++++ + R+iiRNVkGPvregDil+Lle eReArrlr
  MMETSP1325-20131115|7443_1  3 QPVKLAKVNRVLGRTGNTGNVTQVRVEFIDDPN-RSIIRNVKGPVREGDILCLLEWEREARRLR 65
                789****************************77.****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 288.45
//
Query:       MMETSP1325-20131115|7446_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 257.06
//
Query:       MMETSP1325-20131115|7447_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|7448_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 293.35
//
Query:       MMETSP1325-20131115|7449_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00015   21.6   0.0    0.00015   21.6   0.0    1.1  1  PF00651.26 BTB/POZ domain


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.1e-08   0.00015       9      44 ..      15      50 ..       9      73 .. 0.81

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.1e-08
                -S--EEEEETTTEEEEE-HHHHHHH-HHHHHHTTTT CS
  PF00651.26  9 elcDvtlvvgdgkefkahkavLaarSpyFkalftgg 44
                 + D+ l +++g+++ ah++vLaarS+ +++ +  +
  MMETSP1325-20131115|7449_1 15 LFADMSLSLDTGERVLAHRVVLAARSELMRERLAAS 50
                58999************************9987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|7450_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 868.68
//
Query:       MMETSP1325-20131115|7453_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-23   80.6   0.1    9.5e-23   80.3   0.1    1.0  1  PF01144.18 Coenzyme A transferase
  ------ inclusion threshold ------
      0.042   13.4   0.0      0.057   12.9   0.0    1.2  1  PF13336.1  Acetyl-CoA hydrolase/transferase C-terminal domain


Domain annotation for each model (and alignments):
>> PF01144.18  Coenzyme A transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.1   1.4e-26   9.5e-23      51     214 ..       2     155 ..       1     157 [. 0.97

  Alignments for each domain:
  == domain 1    score: 80.3 bits;  conditional E-value: 1.4e-26
                 B--ECCHHTTTTT-EEEEEESCT-BCSHHHHHHHHH.HHHEEEEHCCHHHHHHHHEHH-EEECEEEEE-SEET-GGGTTETEEEE-S-EEEEEEESE.EEEEEEEECEEEB-CSEESSCCCHTTHHHHHHHCEEEEEEEEEEEECCTCCECCGEEBTT--HCEE CS
  PF01144.18  51 agvlglgplllngsvkkviasaggetvnprfgrqflsgelefellpqgglaerlraGaaglpelgfltntgigtlvapklkkvpgfgGaeyilepalradvalikaskadeegnlvfektlgnfndpaiaeaakvtiveveeivevgeldpekvliPgvlvdav 214
                 +g lg+g  + +g ++ ++++ag++tv+ ++g +f+s + +f+ +++g++ +++ +G +++   g+++n  i+    +k   v+g+gGa++++ +   +++++++++ +++  ++   +tl+ +++ +++  +++t+ +v+e+ + g+ + ++++ +g +v+ +
  MMETSP1325-20131115|7453_1   2 NGMLGVGGFPNKGDEDCDLVNAGKQTVTEVPGTSFFSADQSFA-MIRGSHCDVTILGSMQVAACGDMSNYLIP----GK--LVKGMGGAMDLVASGS-KVIVTMEHCDKKGNPKILTSCTLPLTGWRVVS--KIITEKAVFEVLPHGNGLVLTEVAEGESVESI 155
                 68899**************************************.*****************************....77..9************999.5*******************************..9*************************999987 PP

>> PF13336.1  Acetyl-CoA hydrolase/transferase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.4e-06     0.057      36     120 ..      53     128 ..      26     136 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 8.4e-06
   PF13336.1  36 vsinsalevdltGqvnseslggrvvsGvGGqldFvrgAalskggksiialpStakkgeiSrIvpalkegahvttprhdvdyvvTE 120
                 v i   ++v   G ++   + g+ v G+GG +d v+  ++      i++++ + kkg+  +I+++++      t    v+ ++TE
  MMETSP1325-20131115|7453_1  53 VTILGSMQVAACGDMSNYLIPGKLVKGMGGAMDLVASGSK-----VIVTMEHCDKKGN-PKILTSCT---LPLTGWRVVSKIITE 128
                 67788899999999999999***************98777.....8999999998887.88888877...444444456666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 990.49
//
Query:       MMETSP1325-20131115|7456_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.32s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 534.19
//
Query:       MMETSP1325-20131115|7455_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-06   27.4   0.0    3.6e-06   26.9   0.0    1.2  1  PF00536.25 SAM domain (Sterile alpha motif)
    0.00044   19.9   0.0    0.00072   19.2   0.0    1.3  1  PF07647.12 SAM domain (Sterile alpha motif)
  ------ inclusion threshold ------
       0.28   10.6  14.0       0.39   10.1   9.7    1.2  1  PF08597.5  Translation initiation factor eIF3 subunit
       0.96    8.8  10.0       0.29   10.5   5.0    1.5  2  PF03066.10 Nucleoplasmin
        4.4    7.4   8.8        1.3    9.2   3.8    1.8  2  PF09026.5  Centromere protein B dimerisation domain


Domain annotation for each model (and alignments):
>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.3e-09   3.6e-06      17      62 ..     163     207 ..     143     209 .. 0.84

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 1.3e-09
                 -GGGHHHHHCT--SHHHHTT--HHHHHHH-------HHHHHHHHHH CS
  PF00536.25  17 lgqYvdnFrageidgdallllteedLeklgvtllGHrkkIlssIqr 62 
                  + Yv++F++++i+   l+ l +++L +lgv l+GHr+kI ++Iq+
  MMETSP1325-20131115|7455_1 163 VEGYVKKFEEQRITEGDLDMLEDQHLSELGV-LIGHRLKIRRAIQK 207
                 478****************************.66**********96 PP

>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.6e-07   0.00072      18      64 ..     163     207 ..     142     208 .. 0.84

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 2.6e-07
                 -CCSHHHHHHHTS-SCTCCCSSCHHHHHCCCHHCHHHHHHHHHHHHC CS
  PF07647.12  18 lkqYtenFrdqgitggelllrlteedLkrlGitsvghrkkilkkiqe 64 
                  + Y+++F++q it    l  l+ ++L +lG+ + ghr+ki ++iq+
  MMETSP1325-20131115|7455_1 163 VEGYVKKFEEQRITE-GDLDMLEDQHLSELGV-LIGHRLKIRRAIQK 207
                 567************.9999************.**********9995 PP

>> PF08597.5  Translation initiation factor eIF3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   9.7   0.00014      0.39      18      93 ..      40     116 ..      25     135 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00014
   PF08597.5  18 aavkdkwddE.dededvkdsWdeeeeeekekekakkaakakakkelkakieekekakkekkekekekkeeeldeede 93 
                  ++   w dE   +e+ +++ +eeeeee+e  ++ +aakakak++l+a+ +  ++a + k++++ ++++ +   e+e
  MMETSP1325-20131115|7455_1  40 RTKGWVWSDEeGFEEEQLEEEEEEEEEEEEDDQKGRAAKAKAKARLNAQPKTCTTAIRGKRSASFAEDDVDSGYETE 116
                 45555699996667788888888888888999999999999999999997777777777776666644433333444 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   5.0    0.0001      0.29     111     140 ..      48      74 ..      23      84 .. 0.54
   2 ?   -3.4   0.0       1.9   5.3e+03     126     137 ..     107     118 ..      98     130 .. 0.47

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0001
                 .......----XXXXXXXXXXXXXXXXXXX CS
  PF03066.10 111 edesldeeddeedeeeeddeedddeeeeee 140
                 ++e ++ee+ ee+eeee++ee+dd++    
  MMETSP1325-20131115|7455_1  48 DEEGFEEEQLEEEEEEEEEEEEDDQK---G 74 
                 33333333333333333333333322...2 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 1.9
                 XXXXXXXXXXXX CS
  PF03066.10 126 eeddeedddeee 137
                 ++ d   + e++
  MMETSP1325-20131115|7455_1 107 DDVDSGYETEST 118
                 222222222222 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.8   0.00046       1.3      15      40 ..      50      72 ..      41      94 .. 0.53
   2 ?   -2.2   0.0       1.6   4.4e+03      11      18 ..     108     115 ..      98     131 .. 0.47

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00046
   PF09026.5 15 dseeeeedeeedeededeedeeedde 40
                +  eee+ eee+e   +ee+eeedd+
  MMETSP1325-20131115|7455_1 50 EGFEEEQLEEEEE---EEEEEEEDDQ 72
                2222222222222...2222222222 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 1.6
   PF09026.5  11 dsesdsee 18 
                 d +s  e 
  MMETSP1325-20131115|7455_1 108 DVDSGYET 115
                 11111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1115  (0.0815535); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.39s 00:00:01.08 Elapsed: 00:00:00.59
# Mc/sec: 865.13
//
Query:       MMETSP1325-20131115|7458_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 222.21
//
Query:       MMETSP1325-20131115|7457_1  [L=393]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-07   28.9   0.0    1.2e-06   28.1   0.0    1.3  1  PF00168.25 C2 domain
     0.0027   17.2   0.1     0.0027   17.2   0.1    2.4  2  PF12301.3  CD99 antigen like protein 2
  ------ inclusion threshold ------
      0.024   14.5   0.1      0.062   13.2   0.1    1.7  1  PF06714.6  Gp5 N-terminal OB domain
      0.027   13.8   0.0      0.048   12.9   0.0    1.4  1  PF14283.1  Domain of unknown function (DUF4366)
        0.1   11.1   0.8       0.17   10.4   0.5    1.2  1  PF03302.8  Giardia variant-specific surface protein
        5.4    6.5  11.6       0.08   12.3   2.4    2.1  2  PF09976.4  Uncharacterized protein conserved in bacteria (DUF2133)


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0     5e-10   1.2e-06      10      84 ..      49     122 ..      41     123 .. 0.89

  Alignments for each domain:
  == domain 1    score: 28.1 bits;  conditional E-value: 5e-10
                 S--S-S...TSSSS-EEEEEEEECTTEEEEEE--BSS-SSEEEEEEEEEEESCGGGTEEEEEEEECHSSSCSEE---E CS
  PF00168.25  10 nLpnkd...kngtsdpyvkvslggakskkkrTrvikntlnPvWnekftfevvaeelaeleleVkdedrfgkddflGea 84 
                 + pnkd      +sd+y+kv +++ ++   ++ vi n+++P++n ++++  +  +++++ +e+ d d++++dd+l +a
  MMETSP1325-20131115|7457_1  49 HVPNKDwaaIGDKSDAYAKVMVDQMHK---KSDVIYNNNHPTFNVRLHLG-CVSKFSTMLVELRDLDSLSTDDLLVQA 122
                 678888887777************555...********************.9999999*****************997 PP

>> PF12301.3  CD99 antigen like protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   1.2e-06    0.0027      86     140 ..     217     281 ..     142     287 .. 0.83
   2 ?   -2.5   2.0       1.4   3.2e+03      95     123 ..     336     363 ..     319     381 .. 0.45

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.2e-06
   PF12301.3  86 ykpdkgkggggggssn..........adtdeneeeeaetgtiagivsavavallGAvsSyiaYqk 140
                 ++p++++  + g+++           a+ +e+ ++ a +g+i giv a++v l G v  y  Yqk
  MMETSP1325-20131115|7457_1 217 PGPGANATSTPGANATsltepnphapAALQEEASKGASAGAITGIVLALVVVLGGGVFGYWRYQK 281
                 344444444444444488999999887888899999****************************9 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.4
   PF12301.3  95 ggggssnadtdeneeeeaetgtiagivsa 123
                 + + +s++++de++e+ ++ ++ a+ ++a
  MMETSP1325-20131115|7457_1 336 EKRDDSGSGHDEGREQATGGSA-AAAAAA 363
                 2222233333333332222222.222222 PP

>> PF06714.6  Gp5 N-terminal OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   2.7e-05     0.062      31     112 ..     255     330 ..     248     353 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.7e-05
                 ------------------B----BSSTTS----B---B----SS---TT----------SS-----S-TTT---...----- CS
   PF06714.6  31 saavsGigqsptGiveGthvyGfflDkfkqdgvilGtlpgiykekpntskGFsDPngqyPryvgnDvnvLarggvdievgsd 112
                 + a+ Gi  + + +v G  v+G+++ + +++      +     +++ t++ Fs P g y   ++n ++ La gg+ + vgs+
  MMETSP1325-20131115|7457_1 255 AGAITGIVLALV-VVLGGGVFGYWRYQKYNNQ-----WNRYRWQRAPTENEFSTPAGTYTAPLENPIQELAAGGISASVGSE 330
                 568999999988.677889******9999996.....55566677778889***********************99999865 PP

>> PF14283.1  Domain of unknown function (DUF4366)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.1e-05     0.048     142     188 ..     233     285 ..     200     300 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.1e-05
   PF14283.1 142 vepepeke..ee..eepekksglgv..lllvlvvalagGGaayYfKfikpkqa 188
                   +ep+++  ++  ee  k  ++g    +++++v+++gGG++ Y +  k +++
  MMETSP1325-20131115|7457_1 233 SLTEPNPHapAAlqEEASKGASAGAitGIVLALVVVLGGGVFGYWRYQKYNNQ 285
                 22222222222232333333333332134555667899999999988876654 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.5   7.2e-05      0.17     362     384 ..     251     273 ..     244     280 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 7.2e-05
   PF03302.8 362 sGlstGaiaGisvavvvvvgGlv 384
                  G s+Gai+Gi +a vvv+gG v
  MMETSP1325-20131115|7457_1 251 KGASAGAITGIVLALVVVLGGGV 273
                 599***************99854 PP

>> PF09976.4  Uncharacterized protein conserved in bacteria (DUF2133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.8       1.3     3e+03      18      28 ..      18      28 ..      14      31 .. 0.48
   2 ?   12.3   2.4   3.5e-05      0.08      16      40 ..     261     285 ..     259     288 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.3
   PF09976.4 18 ivgavlalagv 28
                +++av+a +  
  MMETSP1325-20131115|7457_1 18 GTAAVAAAGLA 28
                34444444433 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 3.5e-05
   PF09976.4  16 wiivgavlalagvaGwrgwqkyqas 40 
                  +++++v++ +gv+G++ +qky ++
  MMETSP1325-20131115|7457_1 261 IVLALVVVLGGGVFGYWRYQKYNNQ 285
                 68999*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       581  (0.0424956); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.54
# Mc/sec: 1744.02
//
Query:       MMETSP1325-20131115|7460_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   13.6   0.1      0.034   13.1   0.1    1.1  1  PF01514.12 Secretory protein of YscJ/FliF family


Domain annotation for each model (and alignments):
>> PF01514.12  Secretory protein of YscJ/FliF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   2.5e-06     0.034     124     173 ..      24      74 ..      23      76 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.5e-06
  PF01514.12 124 lseidgVlsArVhivlper.safgeeekpasaSVfiklspgveldaqvsaI 173
                 ls +++V  +r  +++p++      ++ p+ aSVf+ ++p + ld  +s+I
  MMETSP1325-20131115|7460_1  24 LSGLSAVRGSRWCVSIPNSiPTISVPVVPPPASVFVDVAPSLALDVCASEI 74 
                 677899999999*******66778899******************999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       82  (0.00599766); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 512.82
//
Query:       MMETSP1325-20131115|7459_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 573.04
//
Query:       MMETSP1325-20131115|7461_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 713.91
//
Query:       MMETSP1325-20131115|7462_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.8   0.0       0.15   11.7   0.0    1.1  1  PF09331.6 Domain of unknown function (DUF1985)


Domain annotation for each model (and alignments):
>> PF09331.6  Domain of unknown function (DUF1985)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.1e-05      0.15      25      53 ..       8      36 ..       3      58 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.1e-05
   PF09331.6 25 FslrEFalvTGLncgkypkekkkkkkgkk 53
                 s  E+a vTG+  g++++e+++++ ++ 
  MMETSP1325-20131115|7462_1  8 VSVVEWAAVTGMTAGEAEEEEEVEEAEEE 36
                5899******************9877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       639  (0.0467379); expected 273.4 (0.02)
Passed bias filter:                      518  (0.0378877); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 370.76
//
Query:       MMETSP1325-20131115|7464_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|7454_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-70  235.3   0.0      3e-70  234.8   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    2.5e-13   49.6   0.0    3.2e-13   49.2   0.0    1.1  1  PF00071.17 Ras family
    2.9e-11   42.7   0.0    4.2e-11   42.2   0.0    1.2  1  PF09439.5  Signal recognition particle receptor beta subunit
    7.9e-11   41.4   0.0      1e-10   41.0   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    8.3e-11   41.0   0.8    5.7e-08   31.7   0.1    2.3  2  PF00503.15 G-protein alpha subunit
    8.9e-10   38.9   0.0    1.6e-09   38.1   0.0    1.4  1  PF08477.8  Miro-like protein
    2.3e-05   24.2   0.0    2.3e-05   24.2   0.0    1.7  2  PF01926.18 50S ribosome-binding GTPase
    0.00072   18.9   0.0    0.00072   18.9   0.0    2.2  3  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.024   13.5   0.1       0.04   12.8   0.1    1.4  1  PF01591.13 6-phosphofructo-2-kinase
      0.069   12.4   0.7       0.46    9.8   0.0    2.0  2  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
       0.14   11.9   0.1       0.23   11.2   0.1    1.4  1  PF13173.1  AAA domain
       0.89    7.1   3.7        1.2    6.7   2.5    1.1  1  PF05086.7  Dictyostelium (Slime Mold) REP protein


Domain annotation for each model (and alignments):
>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.8   0.0   2.6e-73     3e-70      12     174 ..      84     245 ..      76     246 .. 0.98

  Alignments for each domain:
  == domain 1    score: 234.8 bits;  conditional E-value: 2.6e-73
                 TSEEEEEEE--TT---HHHHHHHHHS-EEEE-S--S-EEEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHHHHHHHH CS
  PF00025.16  12 kkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                 + e rill+GLD+aGKtTil+klkl+e+vtt+PTigfnve++e+k+l+ft+wD+GGq+++R lW++Y++ tdavifvvD++dreR+e+a+eeL++l++e+el+++++l +aNKqDl++++s++el ++l+l++lk +++++iq ++av g+gl+egl+wls++
  MMETSP1325-20131115|7454_1  84 RTERRILLVGLDAAGKTTILYKLKLGETVTTIPTIGFNVETVEYKKLTFTMWDIGGQDRIRALWRHYYHGTDAVIFVVDANDRERVETAREELHKLMNEDELRDAVVLTFANKQDLANSMSSSELVDKLALRNLK-HTQWYIQPSCAVDGSGLHEGLDWLSRT 245
                 6799***********************************************************************************************************************************.************************986 PP

>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2   0.0   2.8e-16   3.2e-13       1     125 [.      88     207 ..      88     246 .. 0.82

  Alignments for each domain:
  == domain 1    score: 49.2 bits;  conditional E-value: 2.8e-16
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST.TTSSEEEE---TTGGGG-SS-HH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae.envpivLvGnKvDleekravste 125
                 +++lvG  a GKt++l++   ++  +  ++Tig++    +  v+ k++++++wD  Gq++ ++l + yy+++++++ v d ++re  e++++ ++++ +  e ++ +++  +nK Dl+++ + s e
  MMETSP1325-20131115|7454_1  88 RILLVGLDAAGKTTILYKLKLGETVT-TIPTIGFNVE--T--VEYKKLTFTMWDIGGQDRIRALWRHYYHGTDAVIFVVDANDRERVETAREELHKLMNEDElRDAVVLTFANKQDLANS-MSSSE 207
                 589*****************999765.59***87654..3..5568999******************************************88888888888788999999******982.22333 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   3.7e-14   4.2e-11       3     136 ..      86     211 ..      84     220 .. 0.84

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 3.7e-14
                 --EEEEE--TT---HHHHHHHHHSS-------S.S-EEETT-...-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT---HHHHHHH CS
   PF09439.5   3 kpavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflakspklikda 136
                 ++++llvGl  +GKT+++ +L  +++ +t   +  +  + ++   k+ ++t+ D+ G++++r     +  + +   +++fvvD+  d  +v++  E l +++ + e l++av +  A nKq+l+ + s + + d+
  MMETSP1325-20131115|7454_1  86 ERRILLVGLDAAGKTTILYKLKLGETVTTIPTIgFNVETVEY---KKLTFTMWDIGGQDRIRALW-RH--YYHGTDAVIFVVDAN-DRERVETAREELHKLMNEDE-LRDAVVLTFA-NKQDLANSMSSSELVDK 211
                 689***************************999888889999...*****************855.44..5778899******64.66667777799999998888.7888866655.****9988777665554 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   9.1e-14     1e-10       1     136 [.      88     212 ..      88     228 .. 0.85

  Alignments for each domain:
  == domain 1    score: 41.0 bits;  conditional E-value: 9.1e-14
   PF04670.7   1 klLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesre.leedlekfqeileallqyspeakvfvlihKmDlisedereeifeer 136
                 ++LL+G   +GKt+    i+ ++   +t++   Ti  + ++v+  ++l++ +wD+gGq+++ +        + ++  +++i+V+D++ re +e++ e+++++++   +  ++a v  + +K Dl + +  +e++++ 
  MMETSP1325-20131115|7454_1  88 RILLVGLDAAGKTT----ILYKLKLGETVTTIPTIGFNVETVE-YKKLTFTMWDIGGQDRIRALW-----RHYYHGTDAVIFVVDANDRErVETAREELHKLMNE--DELRDAVVLTFANKQDLANSMSSSELVDKL 212
                 69***********9....8999999*****************8.677***********9999884.....89999************775577777777777764..456899999999999999988888877765 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00072      0.82      53      80 ..      81     108 ..       5     113 .. 0.78
   2 !   31.7   0.1     5e-11   5.7e-08     209     258 ..     115     163 ..     111     207 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00072
                 XXXXXEEEEEEEXXXXXXXHHHHHHHHH CS
  PF00503.15  53 kkkkkevklLlLGqgeSGKsTilkqfkl 80 
                 ++ + e ++Ll+G +  GK+Til ++kl
  MMETSP1325-20131115|7454_1  81 QHARTERRILLVGLDAAGKTTILYKLKL 108
                 55568899***************98875 PP

  == domain 2    score: 31.7 bits;  conditional E-value: 5e-11
                 XXXXXXEEEEEXX.XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEG CS
  PF00503.15 209 lkttGiseikfevesktefrlvDvGGqrserkkWipcfedvdaiiFlvsl 258
                 ++t+G++  ++e+ +k +f ++D+GGq   r+ W ++++++da+iF+v  
  MMETSP1325-20131115|7454_1 115 IPTIGFNVETVEY-KKLTFTMWDIGGQDRIRALWRHYYHGTDAVIFVVDA 163
                 6788888888888.*********************************974 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   1.4e-12   1.6e-09       1     119 []      88     198 ..      88     198 .. 0.84

  Alignments for each domain:
  == domain 1    score: 38.1 bits;  conditional E-value: 1.4e-12
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 ++++vG   +GK+++l +l  +e +       i + + +v+  +v+ ++  + +wd+gg++++ +   +  + +da+++v+d +d+e +e+++e l +l +  +l +  +v  ++nk+D
  MMETSP1325-20131115|7454_1  88 RILLVGLDAAGKTTILYKLKLGETV-----TTIPTIGFNVE--TVEYKKLTFTMWDIGGQDRIRALWRHYYHGTDAVIFVVDANDRERVETAREELHKLMNEDEL-RDAVVLTFANKQD 198
                 799****************999999.....44555555554..55556655**************99999**********************9999999999975.4466678888887 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.6       5.8   6.6e+03      32      39 ..      16      23 ..       8      48 .. 0.57
   2 !   24.2   0.0     2e-08   2.3e-05       1     102 [.      88     179 ..      88     213 .. 0.68

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 5.8
                T-SSSESE CS
  PF01926.18 32 gtTrdite 39
                 tT+++t+
  MMETSP1325-20131115|7454_1 16 TTTTTTTT 23
                44444422 PP

  == domain 2    score: 24.2 bits;  conditional E-value: 2e-08
                 EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSE.SEEEEETTE..EEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETTS...HHHH.HHHHHHHHH CS
  PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrdi.tenevkkek..iilvDtPGiiegasedkeiegikkylekv.eradvlllvvdasa...vlke.adkellnel 102
                 ++ +vG+  +GK+t++ +L   + + +  + g   ++ +++     k  ++++D+ G           ++i+  +++    +d++++vvda++   v  e a +el ++l
  MMETSP1325-20131115|7454_1  88 RILLVGLDAAGKTTILYKLKLGETVTTIPTIGFNVETvEYK-----KltFTMWDIGG----------QDRIRALWRHYyHGTDAVIFVVDANDrerV--EtAREEL-HKL 179
                 5899***************8433323333333333332333.....33489******..........2368899****9***********8775431..2123333.333 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.4       4.5   5.1e+03      19      55 ..      21      36 ..       9      51 .. 0.49
   2 ?    0.8   0.0      0.22   2.5e+02       4      23 ..      87     106 ..      84     115 .. 0.81
   3 !   18.9   0.0   6.3e-07   0.00072      66     170 ..     126     235 ..     110     248 .. 0.72

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 4.5
                HHHHHHHHCCCCEHHHHHHHC-..HHHCCHHHH---B CS
  PF00009.22 19 ltdallykagaiskrgeeaegerlldklkeerergiT 55
                +                     ++  ++ +er+r  T
  MMETSP1325-20131115|7454_1 21 T---------------------TTAVTTMAERARART 36
                2.....................223333333333333 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.22
                 EEEEEEESTT---HHHHHHH CS
  PF00009.22   4 rnigiighvDhGKtTltdal 23 
                 r i ++g   +GKtT++ +l
  MMETSP1325-20131115|7454_1  87 RRILLVGLDAAGKTTILYKL 106
                 77888888899****99887 PP

  == domain 3    score: 18.9 bits;  conditional E-value: 6.3e-07
                 .ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-..S-HHHHHHHHHHHHTT--...EEEEEE-TTST.CHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-ST CS
  PF00009.22  66 etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG..vepqTeevlrlakklgvk...iivviNKiDrv.eaeleeiveelkekllekylekgeeevpvvpgSal 170
                 e+kk ++++ D  G +   +   +  + +D+++ vvda++   ve+  ee+ +l+++ +++   ++++ NK D++   +  e+v++l  + l+++++  +     v gS+l
  MMETSP1325-20131115|7454_1 126 EYKKLTFTMWDIGGQDRIRALWRHYYHGTDAVIFVVDANDRerVETAREELHKLMNEDELRdavVLTFANKQDLAnSMSSSELVDKLALRNLKHTQWYIQ-PSCAVDGSGL 235
                 4777788888888877777777777899***********8877999999************986677********7666777777777555555544332.3444444444 PP

>> PF01591.13  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   3.5e-05      0.04      14      52 ..      87     125 ..      77     182 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.5e-05
  PF01591.13  14 lvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgky 52 
                   i+lvGL a gKt+i  kl      ++++t  Fnv  +
  MMETSP1325-20131115|7454_1  87 RRILLVGLDAAGKTTILYKLKLGETVTTIPTIGFNVETV 125
                 5699****************9999999999999999754 PP

>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.2      0.24   2.8e+02       4      20 ..      90     106 ..      88     113 .. 0.82
   2 ?    9.8   0.0    0.0004      0.46     113     167 ..     153     213 ..     132     223 .. 0.77

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.24
                 EEE-------HHHHHHH CS
  PF02492.14   4 vltGflGsGKTtLlekl 20 
                  l+G   +GKTt+l kl
  MMETSP1325-20131115|7454_1  90 LLVGLDAAGKTTILYKL 106
                 57777789*****9876 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0004
                 EE-EEEEEEETTTH.....CHHHHHHHHHHHHHCT-SEE.EEE-CCCTTTT..HHHHHHHH CS
  PF02492.14 113 gldavvtvvdvknl.....tegedkpekledqlaaAdli.vlnKiDlldaeadlekleedl 167
                 g dav+ vvd++       +++e  +   ed l+ A ++   nK Dl+++  + e +++ +
  MMETSP1325-20131115|7454_1 153 GTDAVIFVVDANDRervetAREELHKLMNEDELRDAVVLtFANKQDLANSMSSSELVDKLA 213
                 689********8888888655666666677888888776356******9996656665554 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1    0.0002      0.23       3     106 ..      87     203 ..      85     219 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.0002
   PF13173.1   3 kilvitGpRrvGKttllkqlakell.keesilyinlddeelrkladpe.........llelfleklke..kkkylflD..Eiqevpewedalkslvddg..rnldviltGsnskllskei 106
                 + +++ G   +GKtt+l++l   +  ++  ++ +n+++ e++kl+ ++         + +++ ++++   +  +++ D     +v+++++ l++l++++  r+  v+lt  n+++l + +
  MMETSP1325-20131115|7454_1  87 RRILLVGLDAAGKTTILYKLKLGETvTTIPTIGFNVETVEYKKLT-FTmwdiggqdrI-RALWRHYYHgtDAVIFVVDanDRERVETAREELHKLMNEDelRD-AVVLTFANKQDLANSM 203
                 56899************9994333357788888888888886655.333444443322.33333323333333344442234566778888888887554333.7777777777776643 PP

>> PF05086.7  Dictyostelium (Slime Mold) REP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.5     0.001       1.2     248     300 ..       8      58 ..       2      89 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.001
   PF05086.7 248 qpskeknkttttttttttttsqartrkrkaidddklsenqakekkknskksdd 300
                 q  + + +tttttttt++tt+++r r r   ++ + +e+++ +++   + ++ 
  MMETSP1325-20131115|7454_1   8 QGTRATHPTTTTTTTTAVTTMAERARART--SPPTTTEARSDTHHAARPSPTR 58 
                 44445555666666666666666555554..6666666555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       750  (0.0548566); expected 273.4 (0.02)
Passed bias filter:                      559  (0.0408865); expected 273.4 (0.02)
Passed Vit filter:                        92  (0.00672908); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.69u 0.37s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|7466_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-44  150.3   0.2      7e-44  150.1   0.1    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.1   0.1   5.1e-48     7e-44       1     147 [.      18     160 ..      18     161 .] 0.98

  Alignments for each domain:
  == domain 1    score: 150.1 bits;  conditional E-value: 5.1e-48
  PF00118.19   1 ladivkttLGPkGrnkmlvnkggkivitndgatilkelelqhpv....akllveaaksqdeevGDGtttaviLageLleeaeklikagihpteiirglelaleialkaLekisislsvdkreellkvartslnsklssresellsklvvdA 147
                 lad+v++tLGPkGrn +l ++ g+++it+dg+t++k++e+++++    a+l++++a+++++++GDGttta++L++++++e+ k ++ag++p++++rg+++a++ +++ + +is +++++  e +++va++s+ns+      +++++l+ dA
  MMETSP1325-20131115|7466_1  18 LADAVQVTLGPKGRNAVLDQAYGAPKITKDGVTVAKSIEFEDRFmnmgAQLVRQVANKTNDQAGDGTTTATVLTRAIFSEGCKSVAAGLNPMDLRRGIQMAVDNVVETIHSISEPIDTK--ERITQVATISANSE------REIGELISDA 160
                 79******************999*****************************************************************************************9999988..**************......********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.55
# Mc/sec: 701.48
//
Query:       MMETSP1325-20131115|7467_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|7469_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 686.23
//
Query:       MMETSP1325-20131115|7470_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-28   96.8   0.9    6.9e-28   96.3   0.7    1.2  1  PF14347.1  Domain of unknown function (DUF4399)
  ------ inclusion threshold ------
      0.035   13.6   0.0      0.061   12.8   0.0    1.3  1  PF00635.21 MSP (Major sperm protein) domain
       0.11   11.8   0.1        4.2    6.6   0.1    2.0  2  PF12389.3  Camelysin metallo-endopeptidase


Domain annotation for each model (and alignments):
>> PF14347.1  Domain of unknown function (DUF4399)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.3   0.7   1.5e-31   6.9e-28       2      86 ..      61     147 ..      60     148 .. 0.96

  Alignments for each domain:
  == domain 1    score: 96.3 bits;  conditional E-value: 1.5e-31
   PF14347.1   2 kfglegmgvapagk.ekpgtgHhhllvDgdkl.peanepipadenhvhfgkGqtettleLepGkHtLqLvlgdakhvphkppvvsek 86 
                 kf+++g +++pa +  k+gtgHhhl++Dg+k  ++++e+ip+d +h h+gk+qte +leLepGkH+L+L++++a+h+++++++++++
  MMETSP1325-20131115|7470_1  61 KFEVSGYELSPAAEgLKEGTGHHHLVIDGPKAfVDKGEAIPFDATHKHYGKAQTEGELELEPGKHKLTLQFANANHESYGKEFAKTI 147
                 799***************************9999*********************************************99988765 PP

>> PF00635.21  MSP (Major sperm protein) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.3e-05     0.061      44     102 ..      83     146 ..      79     152 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.3e-05
                 CCEEEESSEEEB----EEEEEEEEE-----TTS.E......CEEEEEEEEE--TT-S-HHHHHHH CS
  PF00635.21  44 kkyrvrPvyGivkpgesveitvtrqpqdkededkk......kdkfviqyleakddekdakelfke 102
                  + ++  + ++v+ ge + ++ t+++  k + + +      k+k+++q+++a + e++ ke++k 
  MMETSP1325-20131115|7470_1  83 HHLVIDGPKAFVDKGEAIPFDATHKHYGKAQTEGElelepgKHKLTLQFANA-NHESYGKEFAKT 146
                 567788899****************9777776666999**************.888888777765 PP

>> PF12389.3  Camelysin metallo-endopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0    0.0092        42      54      74 ..      41      61 ..      19      69 .. 0.82
   2 ?    6.6   0.1   0.00092       4.2      44     111 ..      81     150 ..      75     153 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.0092
   PF12389.3 54 tlvdvkdlkpgdsvkkefklk 74
                  v  +++k gd+v ++f  k
  MMETSP1325-20131115|7470_1 41 NGVSFSNVKDGDTVPRKFTYK 61
                558899*********999876 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.00092
   PF12389.3  44 gtldlald.pktlvdvkdlkpgdsvkkef.klknkgsldikdvklktdytvkdvkkdnkgedfgkhvkvk 111
                 g   l +d pk+ vd  +  p d+ +k + k + +g l++   k k   +  +  ++  g++f k + vk
  MMETSP1325-20131115|7470_1  81 GHHHLVIDgPKAFVDKGEAIPFDATHKHYgKAQTEGELELEPGKHKLTLQFANANHESYGKEFAKTITVK 150
                 5566766659****************999678999*******9999999999**************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 738.08
//
Query:       MMETSP1325-20131115|7472_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-16   60.0   5.6    1.6e-16   60.0   3.9    1.9  2  PF01061.19 ABC-2 type transporter
    0.00016   20.6   4.5     0.0002   20.3   3.1    1.2  1  PF12698.2  ABC-2 family transporter protein
  ------ inclusion threshold ------
       0.06   12.1   0.6      0.073   11.8   0.4    1.2  1  PF10327.4  Serpentine type 7TM GPCR chemoreceptor Sri
      0.073   12.4   0.4       0.17   11.2   0.3    1.7  1  PF14147.1  Sporulation protein YhaL
       0.31   11.1   0.1       0.31   11.1   0.0    2.3  2  PF13493.1  Domain of unknown function (DUF4118)
        0.6    9.2   7.5        2.3    7.3   5.2    1.9  1  PF00361.15 NADH-Ubiquinone/plastoquinone (complex I), various chains


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   3.9   6.9e-20   1.6e-16     117     209 .]       4      96 ..       2      96 .. 0.97
   2 ?    0.8   0.1     0.092   2.1e+02     130     148 ..     119     137 ..     107     148 .. 0.54

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 6.9e-20
  PF01061.19 117 livyflvgldlsfflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsmpkwlqwiyylnPltyavealrsnll 209
                 livyf + l+ +f+l+  +l+l++ +ass++ll+++ +++++ a+ l++l+++p ll+ G+fi l+++p++++w  yl+ l+ya+++++ n++
  MMETSP1325-20131115|7472_1   4 LIVYFAMKLQGNFLLLTTVLWLMGSAASSVSLLLASSTKDVKSANELSPLVFVPQLLFAGFFIRLEQIPVYIRWAQYLCSLKYAMNLMLLNEF 96 
                 6999999*************************************************************99******************99987 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.092
  PF01061.19 130 flflllllltalfasslgl 148
                 ++++ll+ll +++++ +g 
  MMETSP1325-20131115|7472_1 119 WWVYLLVLLALFAGFRMGA 137
                 4444444444444433332 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   3.1     9e-08    0.0002     224     338 ..       4     133 ..       1     141 [. 0.75

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 9e-08
   PF12698.2 224 lllafglegipfg.nlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfp.leslpsflkwifsiiPffslgdgllrii................tgd.lseil.lsliiLllfavvy 338
                 l+++f+   + +  n+lll  ++ l+g a++++++ll+s +k+ ++a+ + +++++ + ++f+g+f+ le++p +++w+ ++  + + ++++l  +                ++d + e +  +l++Ll++++ +
  MMETSP1325-20131115|7472_1   4 LIVYFA---MKLQgNFLLLTTVLWLMGSAASSVSLLLASSTKDVKSANELSPLVFV-PQLLFAGFFIrLEQIPVYIRWAQYLCSLKYAMNLMLL-NefgheddldtvkamldQNDvYKENWwVYLLVLLALFAGF 133
                 455777...66665888888999999999999****************98888888.99999999999***********999999997777643.2335555555555554444434444447777777777655 PP

>> PF10327.4  Serpentine type 7TM GPCR chemoreceptor Sri
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   3.2e-05     0.073     104     212 ..      31     142 ..       4     148 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.2e-05
   PF10327.4 104 qleslllCfvrk.hqaiakikkkhsipklllklllilllifpflvafllslsslskeeqleyvken.yPeylskfss.lpnFeiYdlnkwlivvlilalfglvlvfvvlvll 212
                    slll+  +k  +++ +++    +p+ll+  ++i l  +p+++  + +l+sl++  +l +++e  + + l+  ++ l++ ++Y+ n+w++++++lalf+++ ++++ +l+
  MMETSP1325-20131115|7472_1  31 SSVSLLLASSTKdVKSANELSPLVFVPQLLFAGFFIRLEQIPVYIRWAQYLCSLKYAMNLMLLNEFgHEDDLDTVKAmLDQNDVYKENWWVYLLVLLALFAGFRMGALAMLV 142
                 3334444444441567777888889999999999999999***************999999999853666666665428999*********************999888765 PP

>> PF14147.1  Sporulation protein YhaL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   7.6e-05      0.17       3      18 ..     119     134 ..     118     145 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 7.6e-05
   PF14147.1   3 wWvYlvilgilfSaym 18 
                 wWvYl++l  lf ++ 
  MMETSP1325-20131115|7472_1 119 WWVYLLVLLALFAGFR 134
                 *************996 PP

>> PF13493.1  Domain of unknown function (DUF4118)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   1.3      0.58   1.3e+03      42      58 ..      24      40 ..       7      68 .. 0.55
   2 ?   11.1   0.0   0.00013      0.31      22      55 ..     112     142 ..     103     145 .. 0.74

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.58
   PF13493.1 42 lryGlraglisallasl 58
                + +G++a+ +s llas 
  MMETSP1325-20131115|7472_1 24 WLMGSAASSVSLLLASS 40
                34566666666666543 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00013
   PF13493.1  22 ddpllieagflyllavllialryGlraglisall 55 
                 +d ++    + ++   +l+al+ G+r+g +++l+
  MMETSP1325-20131115|7472_1 112 NDVYKE---NWWVYLLVLLALFAGFRMGALAMLV 142
                 333333...345688899*************985 PP

>> PF00361.15  NADH-Ubiquinone/plastoquinone (complex I), various chains
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   5.2     0.001       2.3      34     100 ..       3      75 ..       1     146 [. 0.89

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.001
  PF00361.15  34 aslkyflltalgsllLLlgilllyllt.gslsfeellk.....allnsnlllllsllllvallvKlaqaplhl 100
                 a + yf ++  g +lLL  +l+l+++  +s+s+   ++       ++ + l ++  ll+ ++++ l q+p+++
  MMETSP1325-20131115|7472_1   3 ALIVYFAMKLQGNFLLLTTVLWLMGSAaSSVSLLLASStkdvkSANELSPLVFVPQLLFAGFFIRLEQIPVYI 75 
                 6688*********************99899999988889988777777788888899*************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 759.70
//
Query:       MMETSP1325-20131115|7468_1  [L=724]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (724 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.00u 0.31s 00:00:01.31 Elapsed: 00:00:00.53
# Mc/sec: 3273.51
//
Query:       MMETSP1325-20131115|7463_1  [L=496]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-13   50.7   0.0    4.2e-12   46.3   0.0    2.2  1  PF00005.22 ABC transporter
      0.002   17.5   0.2     0.0027   17.0   0.1    1.2  1  PF00664.18 ABC transporter transmembrane region
     0.0021   17.9   0.0        1.2    8.9   0.0    2.2  2  PF13304.1  AAA domain
  ------ inclusion threshold ------
      0.022   14.1   0.1      0.044   13.1   0.0    1.4  1  PF13555.1  P-loop containing region of AAA domain
      0.075   12.9   0.0       0.17   11.7   0.0    1.6  1  PF01926.18 50S ribosome-binding GTPase
       0.12   11.1   0.0        0.2   10.3   0.0    1.3  1  PF00931.17 NB-ARC domain
       0.16   12.6   0.7       0.35   11.5   0.5    1.7  1  PF13207.1  AAA domain
       0.29   10.7   2.2       0.32   10.6   0.3    1.8  2  PF01935.12 Domain of unknown function DUF87


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   2.4e-15   4.2e-12      20     118 .]     227     399 ..     214     399 .. 0.94

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 2.4e-15
                 E-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--.............................................................................----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  20 vdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk.............................................................................srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 vd  + d+++ +l++lr  +g+ipqdp lf + t+ren+d++ e+  td++i+evl+ v++ + +++                                                                             ++++++S G  q  +lAr+ll++p++  +DE+t+
  MMETSP1325-20131115|7463_1 227 VD--GVDVRRVPLKTLRsgMGMIPQDPWLF-SGTLRENIDPFGEY--TDAQIYEVLDLVKIGNYVRSlghgedeaeegkqdegeeakeeggeagpedvgkrggyapaptadmetdleggsaatatgtppsmselekaglaakvlEKGENYSTGTIQLFCLARVLLRRPRVCFMDEATA 399
                 44..445677889999999***********.**************..9***************99989************************************************************************************************************96 PP

>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   1.6e-06    0.0027     189     267 ..      13      91 ..      10      99 .. 0.72

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.6e-06
  PF00664.18 189 girtVkafggeekeleryekaleeakkagikkaitagllfg.ftqlisylsyalalwfgtflsvisgelsvgtvfaflsl 267
                 g+ +V+afg+ + + + ++++++++  a ++  ++ +++++ ++  ++ + +al++++ + +  +  + ++ +  +++s+
  MMETSP1325-20131115|7463_1  13 GLDSVRAFGRVHIFAKDFDNKVQDFITAFFTMGTVERWVNAaIIAPLTGVFMALMVVVLVAM-RELDFVTPESAGLAVSY 91 
                 7889************************************8433334444355555555555.45555555555555555 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00067       1.2       3      47 ..     188     253 ..     187     272 .. 0.69
   2 !    6.8   0.0    0.0029         5     237     270 ..     371     401 ..     352     405 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00067
   PF13304.1   3 viiGpNgsGKSnlLkaldflfr.....................delvlglnldrslnvniekipfl 47 
                 +i+G+ g+GKS+l  a + ++r                     d ++  l++ rs+ ++i+ +p+l
  MMETSP1325-20131115|7463_1 188 GIVGRTGAGKSTLALAAFRMARmlprgdeeqddpesgfevdgvDVRRVPLKTLRSGMGMIPQDPWL 253
                 69*****************99987666555555555555555555555555555555555555555 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0029
   PF13304.1 237 lSdGtkrllalltallsalekgsvlliDEpEngL 270
                  S Gt +l+ l+  ll+++   +v + DE  ++ 
  MMETSP1325-20131115|7463_1 371 YSTGTIQLFCLARVLLRRP---RVCFMDEATASV 401
                 3******************...*******87775 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.6e-05     0.044      15      40 ..     177     201 ..     173     211 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.6e-05
   PF13555.1  15 htveidpkgkntlltGasGsGKSTll 40 
                  +++i+ +g+ + ++G++G+GKSTl 
  MMETSP1325-20131115|7463_1 177 ASFSIA-SGERVGIVGRTGAGKSTLA 201
                 567776.566999***********94 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.8e-05      0.17       1      18 [.     186     203 ..     186     229 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.8e-05
                 EEEEE--TT---HHHHHH CS
  PF01926.18   1 evaivGrpNvGKStLina 18 
                 +v+ivGr+ +GKStL  a
  MMETSP1325-20131115|7463_1 186 RVGIVGRTGAGKSTLALA 203
                 69************9755 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00012       0.2      22      42 ..     187     207 ..     182     213 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00012
                 EEEE-------HHHHHHHTS- CS
  PF00931.17  22 vglvGmgGvGKttlakqvykd 42 
                 vg+vG+ G GK+tla ++++ 
  MMETSP1325-20131115|7463_1 187 VGIVGRTGAGKSTLALAAFRM 207
                 89*************999975 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.5   0.00021      0.35       1      16 [.     186     201 ..     186     280 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00021
                 EE--B--TT---HHHH CS
   PF13207.1   1 viaitGppGsGKsTla 16 
                 +++i+G +G+GKsTla
  MMETSP1325-20131115|7463_1 186 RVGIVGRTGAGKSTLA 201
                 699************9 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.3   0.00019      0.32      25      40 ..     186     201 ..     181     203 .. 0.90
   2 ?   -1.6   0.0      0.99   1.7e+03      58      81 ..     262     282 ..     262     298 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00019
  PF01935.12  25 HlAilgsTGsGKSntv 40 
                 +++i+g+TG+GKS+++
  MMETSP1325-20131115|7463_1 186 RVGIVGRTGAGKSTLA 201
                 79************86 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.99
  PF01935.12  58 lDpHGEYgkalekllsekvkvitp 81 
                 +Dp GEY +a+   + e ++++++
  MMETSP1325-20131115|7463_1 262 IDPFGEYTDAQ---IYEVLDLVKI 282
                 79*******99...5555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       500  (0.0365711); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        73  (0.00533938); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.87u 0.42s 00:00:01.29 Elapsed: 00:00:00.59
# Mc/sec: 2014.56
//
Query:       MMETSP1325-20131115|7471_1  [L=505]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-06   25.3   0.1    2.5e-05   23.9   0.1    1.8  1  PF04212.13 MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.1   1.8e-09   2.5e-05       3      68 ..     120     192 ..     118     193 .. 0.86

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 1.8e-09
                 HHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHC.....TTHHCHHH...HHHHHHHHHHHHHHHHHH CS
  PF04212.13   3 skAlelikkAveaDeagkyeeAlelYkeAlelLlqalkye.....pnperrea...lrqkieeylkrAeelkel 68 
                 + A + +++Av+ D++++   Al+ Y++ + +L+q+++y        ++++e    l+  ++ y +r+  lke+
  MMETSP1325-20131115|7471_1 120 RLAMDDANTAVQMDRENDDRMALRFYTKTVVVLMQVVTYLelrghE-KKDKETvdnLQGLVASYRSRIAALKEI 192
                 5688889********************************99*8852.333333577****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.84u 0.38s 00:00:01.22 Elapsed: 00:00:00.54
# Mc/sec: 2241.04
//
Query:       MMETSP1325-20131115|7473_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-26   91.3   1.6    4.8e-26   91.0   1.1    1.0  1  PF00909.16 Ammonium Transporter Family


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   1.1   3.5e-30   4.8e-26     268     397 ..       2     138 ..       1     140 [. 0.91

  Alignments for each domain:
  == domain 1    score: 91.0 bits;  conditional E-value: 3.5e-30
                 T------------------------CHHHHHHTS-HTTGG-----------------TTSTT--........-----------...-HHHHHHHHHHHHHHH---TTT---HHHHHH---B-XHHHHHXXXHHHHXXXX CS
  PF00909.16 268 acavvepwgAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv........askisggllsgeg.kqlvvqligilvilayafvvtlilllllklllgLrvseeeeevglDvaehget 397
                 +c+v+ep+gA+iiG+++ ++ + +vk   + l+idD++ +++vH+ +G+ G+l++g+fa+++ +        a+k  +gl++g+  +++ + ++ i +i+a++ + + i++ +l+ +  Lrv+ + ee+g+D +ehg t
  MMETSP1325-20131115|7473_1   2 SCSVIEPYGAFIIGFLSCFVYLGAVK-ALDALRIDDVVLAIPVHLCCGCFGVLMSGLFATKENYssayysarADKC-AGLFYGGDgSSMAAAVVFIFAIVAWVGTWSCIVFGTLSSMSLLRVEGQVEEEGMDKSEHGVT 138
                 8****************888888886.99*******************************99889****9955555.555555555**************************************************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 783.42
//
Query:       MMETSP1325-20131115|7474_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-11   43.5   0.0    3.4e-11   42.6   0.0    1.4  1  PF00173.23 Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
       0.21   11.0   0.9       0.33   10.3   0.7    1.3  1  PF07742.7  BTG family


Domain annotation for each model (and alignments):
>> PF00173.23  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.0     5e-15   3.4e-11      14      67 ..     127     180 ..     116     185 .. 0.89

  Alignments for each domain:
  == domain 1    score: 42.6 bits;  conditional E-value: 5e-15
                 TEEEEECTTEEEETTTTTTTHTSTTHHHHTT---BHHHHHHHHHHHHHHHHHHH CS
  PF00173.23  14 kdswvvirgkVYDvskflkdhpggasailafaGkDaTeafenashseaaeklle 67 
                 + +++ + g+VYDvs fl++hpg  + il  aG D Te+fe+  hs+ a++ ++
  MMETSP1325-20131115|7474_1 127 QGCLIGVYGTVYDVSFFLDEHPGTPETILDNAGGDTTEFFEDVGHSTSARRRMK 180
                 679999****************************************77777665 PP

>> PF07742.7  BTG family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.7   4.8e-05      0.33      25      58 ..      69     103 ..      58     125 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 4.8e-05
   PF07742.7  25 ealeaFaeeLeelLvekykkhWypekPk.kGsayR 58 
                 +  ++++++L+++  ++ ++hW+p++P  +Gs  R
  MMETSP1325-20131115|7474_1  69 RFGKHWESSLMQAAAKRHHSHWDPSQPPpSGSWRR 103
                 555788999***************99752666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.32s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 881.68
//
Query:       MMETSP1325-20131115|7477_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|7476_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.042   13.2   0.7      0.082   12.3   0.5    1.5  1  PF13240.1 zinc-ribbon domain
      0.065   12.9   1.9       0.63    9.8   1.3    2.6  1  PF14019.1 Protein of unknown function (DUF4235)


Domain annotation for each model (and alignments):
>> PF13240.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.5   1.2e-05     0.082       2      14 ..      14      26 ..      13      34 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.2e-05
   PF13240.1  2 CPkCGaeledgak 14
                C++CG+e+++g +
  MMETSP1325-20131115|7476_1 14 CTQCGKEIPEGNR 26
                *********9975 PP

>> PF14019.1  Protein of unknown function (DUF4235)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.3   9.3e-05      0.63       5      40 ..      37      72 ..      36     133 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 9.3e-05
   PF14019.1  5 glvaglvagavankafaavWkavtgedaptdktdeq 40
                ++++++va  +a+ a++  W++ ++ +ap+++  e+
  MMETSP1325-20131115|7476_1 37 VPATPAVASSAASSAANEEWDKLSDLSAPSNPPTEE 72
                689**********************99998776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 1520.95
//
Query:       MMETSP1325-20131115|7479_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 145.66
//
Query:       MMETSP1325-20131115|7480_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.68
# Mc/sec: 401.74
//
Query:       MMETSP1325-20131115|7483_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       797  (0.0582943); expected 273.4 (0.02)
Passed bias filter:                      578  (0.0422762); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.57
# Mc/sec: 223.11
//
Query:       MMETSP1325-20131115|7482_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-10   38.5   0.1    1.9e-09   37.2   0.1    1.7  1  PF03992.11 Antibiotic biosynthesis monooxygenase


Domain annotation for each model (and alignments):
>> PF03992.11  Antibiotic biosynthesis monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.1   1.4e-13   1.9e-09       2      77 ..      34     120 ..      33     121 .. 0.86

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 1.4e-13
                 EEEEEEEEEEGGHHHHHHHHHHHHHHHHHTT-----EEEEEE............CTTSCEEEEEEEEESSHHHHHHHHTSHHHHHHHH CS
  PF03992.11   2 vivvnefkvkpgaeeafeeafaeaaesllaeepGflgyellr............stddpdevvvieeWeseaafrahlksphfkaahe 77 
                 +i+ n f v +g e+afe+++a + ++l +e +Gf+ ++ lr              d++  +v ++ W+++a+f+ +++  +f +ah 
  MMETSP1325-20131115|7482_1  34 FIAQNNFCVNAGMEAAFEQRWAARESAL-KECEGFVAFSMLRrdsrakghgvapMGDGEANYVSTTIWKDRASFDGWRNGLAFGKAHG 120
                 7899**********************99.8***********66666666666543555566*******************99999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 821.61
//
Query:       MMETSP1325-20131115|7484_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.96
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|7486_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|7487_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-41  141.2   0.1      2e-41  140.9   0.0    1.1  1  PF07991.7  Acetohydroxy acid isomeroreductase, catalytic domain
    9.8e-07   27.9   0.0    1.2e-06   27.6   0.0    1.1  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
    4.5e-05   22.8   0.0    6.4e-05   22.3   0.0    1.3  1  PF02558.11 Ketopantoate reductase PanE/ApbA
    0.00085   19.0   0.1     0.0011   18.6   0.1    1.2  1  PF00670.16 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
     0.0016   18.5   0.0     0.0027   17.8   0.0    1.3  1  PF13241.1  Putative NAD(P)-binding
     0.0098   15.6   0.0      0.015   15.1   0.0    1.3  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
  ------ inclusion threshold ------
      0.036   12.9   0.1       0.07   11.9   0.0    1.5  2  PF03435.13 Saccharopine dehydrogenase
      0.053   13.9   0.0      0.089   13.1   0.0    1.4  1  PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold


Domain annotation for each model (and alignments):
>> PF07991.7  Acetohydroxy acid isomeroreductase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.9   0.0   1.2e-44     2e-41       2     122 ..      50     174 ..      49     175 .] 0.97

  Alignments for each domain:
  == domain 1    score: 140.9 bits;  conditional E-value: 1.2e-44
                 H----EEEE-------HHHHHHHH----EEE------.....HHHHHHHH---EE--HHHHHHT-SEEEE-S-GGG---HHHHHTGGG-----EEEE----TTTTTSS---TTSEEEEEEES---- CS
   PF07991.7   2 lkekkiaviGyGsqGhaqalnlrdsgldvvvglregs.....ksvekakkdgfevltveeavkkadvvmiliPDelqkevyekeiepnlkegaalafahGfnihfglikppkdvdvvmvAPkgpGh 122
                 + +kk++++G+G+qG +q+ln+rdsg+dv+++lr+++     +s+ +ak+++f+v t+e+++ +ad+v++l+PD+++++v+ ++++p +k+ga+la++hGfni+++ +++++d++v+mvAPk+pG+
  MMETSP1325-20131115|7487_1  50 IAGKKVVIVGCGAQGLNQGLNMRDSGCDVSYALRQSAidakrQSYLNAKENNFDVGTYEDLIPQADLVLNLTPDKQHTSVV-SAVMPLMKKGATLAYSHGFNIVEEGMQVRDDLTVIMVAPKCPGT 174
                 789*******************************9988887679*************************************.99*****************************************7 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   7.2e-10   1.2e-06      24     123 ..      40     143 ..       9     156 .. 0.78

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 7.2e-10
                 .--GCG-B-.GGGSEEE-B-------HHHHHHHH---EEEE--SS--.........HHHH---EE--CCCCCCC-SEEEE----STTTTT-B-HHHHCCS-TT-EE CS
  PF02826.14  24 ssekallgkelsgktvGiiGlGrIGqavakrlkafgmkvlaydrskkkee......eeeelgaevvsleellaesDvvslhlpltpetrhlinaeelakmkkgail 123
                 +se +  +  ++gk+v i+G+G+ G +    ++  g++v +  r+   ++      +++e+++ v + e+l+ ++D v + +p +++t   + ++ + +mkkga l
  MMETSP1325-20131115|7487_1  40 RSEFDDGIAAIAGKKVVIVGCGAQGLNQGLNMRDSGCDVSYALRQSAIDAkrqsylNAKENNFDVGTYEDLIPQADLVLNLTPDKQHT--SVVSAVMPLMKKGATL 143
                 44555666799*****************************99888542223345788999999999**************99966655..577899999***9987 PP

>> PF02558.11  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   3.8e-08   6.4e-05       1      96 [.      55     142 ..      55     167 .. 0.87

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 3.8e-08
                 EEEE-----------HHHHHHH-EEEE----HHHHHH----EEE-SS-EEE---SEEES-T.TT----SEEEE--SSS-S----TTTGGG-----E CS
  PF02558.11   1 iailGaGaiGsllaakLakagadvtlilrsrrlealkknglrlksdkgeeivrppealseekqelepidllivtvKayqteealeelkplldpntv 96 
                 ++i+G+Ga+G   + ++  +g+dv   lr+  ++a ++  l+ k+++       ++ + e+   + ++dl++  +   q  ++++++ pl+++ ++
  MMETSP1325-20131115|7487_1  55 VVIVGCGAQGLNQGLNMRDSGCDVSYALRQSAIDAKRQSYLNAKENN------FDVGTYED--LIPQADLVLNLTPDKQHTSVVSAVMPLMKKGAT 142
                 68***************99************9999999999999999......55555555..5799***********************999854 PP

>> PF00670.16  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   6.7e-07    0.0011      20     107 ..      49     144 ..      39     169 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 6.7e-07
                 -----EEEEE---------HHHHHH---EEEE-....-S-HH..HHHHHHC---EE--HHHCTTT-SEEEE-----S..SB-HHHHCCS-TTEEEE CS
  PF00670.16  20 liaGkvavvaGyGdvGkGcaaslkalGarvivt....evdPi..calqaameGfevvtleevvkkadivvtttGnkd..iitlehlekmkddaivc 107
                  iaGk++v++G G  G      ++  G+ v  +     +d    + l a  + f+v t e+++ +ad+v+  t  k+   + +  +  mk+ a ++
  MMETSP1325-20131115|7487_1  49 AIAGKKVVIVGCGAQGLNQGLNMRDSGCDVSYAlrqsAIDAKrqSYLNAKENNFDVGTYEDLIPQADLVLNLTPDKQhtSVVSAVMPLMKKGATLA 144
                 59**************************99754222256654225699999******************999877652246667788888877665 PP

>> PF13241.1  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.6e-06    0.0027       5      74 ..      50     127 ..      47     140 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.6e-06
                 -TT-EEEEE-------HHHHHHTT---EEEEE-SS-...-TT-T................-TT--EEEEE--S-HHHH CS
   PF13241.1   5 lkgkkvlvvGgGevAarkvrklleagakvtvvspei...keleelvklaeeef.....eedlegadlviaatddeeln 74 
                 + gkkv++vG G  +++   ++ ++g++v     ++   ++ ++ ++++e++f     e+ + +adlv+  t+d++  
  MMETSP1325-20131115|7487_1  50 IAGKKVVIVGCGAQGLNQGLNMRDSGCDVSYALRQSaidAKRQSYLNAKENNFdvgtyEDLIPQADLVLNLTPDKQHT 127
                 789**************************87655543343334556677777655554777999********998765 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   8.5e-06     0.015       2      89 ..      53     143 ..      52     156 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 8.5e-06
                 BEBEEB-------HHHHHHHH---EEEE--SSH...HHHHHHHHTT..EEE-SSHHHHHHHBSEEEE-SSSHHHHHHHHHH.HCCC-----EE CS
  PF03446.10   2 kkigfiGlGvMGspmalnllkagyevavynrtk...ekveelvaeg..akaaesieelvasldvvilmvkagkavdeviegellealekgdil 89 
                 kk+ ++G G  G +  ln+ ++g++v+   r++   +k ++ ++++     + + e+l+ ++d+v+ + ++++++ +v++  +++ ++kg++l
  MMETSP1325-20131115|7487_1  53 KKVVIVGCGAQGLNQGLNMRDSGCDVSYALRQSaidAKRQSYLNAKenNFDVGTYEDLIPQADLVLNLTPDKQHT-SVVSA-VMPLMKKGATL 143
                 57889*********************98877743334555555444555677899**********9988887765.67788.9*******987 PP

>> PF03435.13  Saccharopine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.77   1.3e+03     111     123 ..      49      61 ..       4      64 .. 0.40
   2 ?   11.9   0.0   4.1e-05      0.07      44      88 ..      93     134 ..      78     161 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.77
  PF03435.13 111 akeaGvtavleaG 123
                 a ++  ++++++G
  MMETSP1325-20131115|7487_1  49 AIAGKKVVIVGCG 61 
                 2234444444444 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 4.1e-05
  PF03435.13  44 lglrveaialdvsnyeaLeallkegdlvvnlappilsltvlkaCi 88 
                 ++l+++   +dv  ye+   l+ ++dlv+nl+p+ ++ +v+ a +
  MMETSP1325-20131115|7487_1  93 SYLNAKENNFDVGTYED---LIPQADLVLNLTPDKQHTSVVSAVM 134
                 77888999999999997...6669****************99875 PP

>> PF01408.17  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   5.2e-05     0.089       2      83 ..      54     134 ..      53     147 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 5.2e-05
                 EEEEE----HHHHHHHHHHHCHCSEEEEEEEGSSHCCHHHH....HHHCTHHCCSSHHHHHHSTT-SEEEE-S-GGGHHHHHHHHH CS
  PF01408.17   2 rvgivGaGkigsrhlrplnesqrreelvalvdpdperaeav....aesfgveaysdleelledpkidavivatpngthadlalaal 83 
                 +v+ivG+G  g +++ ++++s  + ++  ++ +++  a++     a + +   + ++e+l+   + d+v+  tp ++h  ++ a++
  MMETSP1325-20131115|7487_1  54 KVVIVGCGAQGLNQGLNMRDS--GCDVSYALRQSAIDAKRQsylnA-KENNFDVGTYEDLIP--QADLVLNLTPDKQHTSVVSAVM 134
                 89*************666666..67777777776666666434432.333336778999999..8899999999999999887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 735.72
//
Query:       MMETSP1325-20131115|7490_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|7491_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 617.73
//
Query:       MMETSP1325-20131115|7485_1  [L=731]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-13   49.9   0.3    3.7e-13   49.1   0.2    1.4  1  PF00249.26 Myb-like DNA-binding domain
    1.3e-08   34.6   2.6    2.8e-08   33.5   1.8    1.6  1  PF13921.1  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.2   5.4e-17   3.7e-13       1      45 [.       7      49 ..       7      51 .. 0.96

  Alignments for each domain:
  == domain 1    score: 49.1 bits;  conditional E-value: 5.4e-17
                TTSS-HHHHHHHHHHHHHTTS-.HHHHHHHCTTTS-HHHHHHHHH CS
  PF00249.26  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                +g WT+eEd  lv+a  ++G+  W +Ia++++ gR+++ +k+rw+
  MMETSP1325-20131115|7485_1  7 KGGWTEEEDAVLVEAQSKWGNS-WTKIAKLLP-GRSENAVKNRWN 49
                688*****************99.*********.***********9 PP

>> PF13921.1  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   1.8   4.2e-12   2.8e-08       1      45 [.      10      54 ..      10      68 .. 0.85

  Alignments for each domain:
  == domain 1    score: 33.5 bits;  conditional E-value: 4.2e-12
   PF13921.1  1 WtdeEdeiLlklveeygndWseIaeel.grRtplacqdrwknkLrp 45
                Wt+eEd  L +  ++ gn W++Ia+ l g R+++a+++rw++  r 
  MMETSP1325-20131115|7485_1 10 WTEEEDAVLVEAQSKWGNSWTKIAKLLpG-RSENAVKNRWNSATRR 54
                ***************************88.***********94432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2017  (0.147528); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.55u 0.37s 00:00:01.92 Elapsed: 00:00:00.87
# Mc/sec: 2013.49
//
Query:       MMETSP1325-20131115|7492_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.8   0.0       0.28   10.9   0.0    2.0  2  PF03484.10 tRNA synthetase B5 domain


Domain annotation for each model (and alignments):
>> PF03484.10  tRNA synthetase B5 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   2.1e-05      0.28       9      37 ..      45      73 ..      39      92 .. 0.86
   2 ?   -1.4   0.0      0.14   1.9e+03      15      31 ..     122     138 ..     119     139 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 2.1e-05
  PF03484.10  9 qkvsrilGielsddeiekiLkrlgfkvek 37
                +  ++++G e+s +++e +Lk+l+++ + 
  MMETSP1325-20131115|7492_1 45 EAHKQLIGEEISRTDMEALLKSLDISHHI 73
                56699******************998765 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.14
  PF03484.10  15 lGielsddeiekiLkrl 31 
                  G +++dd +++++ r 
  MMETSP1325-20131115|7492_1 122 AGQYFDDDAVKEMINRV 138
                 68889999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 684.67
//
Query:       MMETSP1325-20131115|7494_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 416.21
//
Query:       MMETSP1325-20131115|7495_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        46  (0.00336454); expected 273.4 (0.02)
Passed bias filter:                       46  (0.00336454); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.35s 00:00:00.63 Elapsed: 00:00:00.50
# Mc/sec: 153.37
//
Query:       MMETSP1325-20131115|7489_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-30  104.2   6.8    9.8e-13   47.5   0.0    4.4  5  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0      0.89   1.2e+04      23      34 ..      32      43 ..      31      54 .. 0.71
   2 !   15.7   0.1   5.7e-07    0.0078       3      34 ..      69     100 ..      67     109 .. 0.88
   3 !    4.6   0.0    0.0017        23      61      85 ..     110     134 ..     107     141 .. 0.90
   4 !   37.4   0.0   9.6e-14   1.3e-09       3      95 ..     154     239 ..     152     240 .. 0.92
   5 !   47.5   0.0   7.2e-17   9.8e-13       4      77 ..     247     321 ..     244     337 .. 0.91

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 0.89
                CHHHHHHHHHHH CS
  PF00153.22 23 ttPldvvKtrlq 34
                ++P+dv K  l 
  MMETSP1325-20131115|7489_1 32 VQPVDVSKQLLK 43
                689999998887 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 5.7e-07
                 HHHHHHHH----HHHCCHHHCHHHHHHHHHHH CS
  PF00153.22   3 lsvlksllaGaiAgaiaalvttPldvvKtrlq 34 
                 +s+++ +++G++Ag+i++++++Pl   Kt+ q
  MMETSP1325-20131115|7489_1  69 QSLARMFAVGGTAGVIETFIVQPLVYWKTMQQ 100
                 5778899**********************999 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.0017
                 GGGG---HHHHHHHHHHHHHHHHHH CS
  PF00153.22  61 rglyrGllpnllrvvpaaaikfvty 85 
                 r lyrG+ +n   + p +a++ +t 
  MMETSP1325-20131115|7489_1 110 RQLYRGVFVNAASIGPISAVQYTTN 134
                 78*******************9986 PP

  == domain 4    score: 37.4 bits;  conditional E-value: 9.6e-14
                 HHHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH-GG CS
  PF00153.22   3 lsvlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkllskk 95 
                 ++ + +l+++a +ga++ +v+tP ++v +  q       ++ ++i++   +i+k++Gi g++rG+++++lr++  +   +++   +k++l+++
  MMETSP1325-20131115|7489_1 154 MNNVDTLAISASSGALSCAVVTPAELVMISQQ-------RSGRTIVEECLSIWKSKGIGGFFRGNTATCLREAGWTFGFLGLAPVIKSWLQND 239
                 567788999******************99999.......78899******************************9999999999999999875 PP

  == domain 5    score: 47.5 bits;  conditional E-value: 7.2e-17
                 HHHHHHH----HHHCCHHHCHHHHHHHHHHH.-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHH CS
  PF00153.22   4 svlksllaGaiAgaiaalvttPldvvKtrlq.ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpa 77 
                  +++sl+++++Ag  aa++t+P+d vKt +q +   +++ +y+g++ a k +y++ Gi+ +++G++p+  r + a
  MMETSP1325-20131115|7489_1 247 DIAASLASSLVAGQGAAILTQPFDQVKTVMQaDRGVNGPMRYRGFVAAAKAVYDRGGIQDFWKGIVPRSGRCMAA 321
                 678899*************************88888999****************************99887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.33s 00:00:01.07 Elapsed: 00:00:00.56
# Mc/sec: 1899.97
//
Query:       MMETSP1325-20131115|7497_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|7498_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 869.27
//
Query:       MMETSP1325-20131115|7496_1  [L=440]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.36s 00:00:01.08 Elapsed: 00:00:00.51
# Mc/sec: 2067.45
//
Query:       MMETSP1325-20131115|7500_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-27   96.2   0.0    1.9e-27   95.9   0.0    1.1  1  PF00069.20 Protein kinase domain
    6.8e-11   41.6   0.0    9.4e-11   41.2   0.0    1.4  1  PF07714.12 Protein tyrosine kinase
    0.00044   19.2   0.1      0.001   18.0   0.0    1.6  2  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0041   16.7   0.4      0.008   15.8   0.1    1.6  2  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.022   13.8   1.5      0.034   13.1   0.2    1.7  2  PF02958.15 Ecdysteroid kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.9   0.0   6.9e-31   1.9e-27      87     256 ..       4     194 ..       1     196 [. 0.83

  Alignments for each domain:
  == domain 1    score: 95.9 bits;  conditional E-value: 6.9e-31
                 HHHH.HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E.........EE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST..............HHHHHHHHHCCCHHTTS--GGGGCSHHH....HHHHHHHHHHT-SSGGGS--HHHHHT CS
  PF00069.20  87 dllk.kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel.........kiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge..............seedqleliekilkkkleedepksssks....eelkdlikkllekdpakRltaeeilk 256
                 dl++ ++g + e  + +++  +l +l++lH +g++HrD+K+eN+L+d +++          +++DF l++ +++     t  +g r +mAPE+l +   + +k DvWs +++l el+ g++ f++e              +       +  +l++ ++ +e+  + ++    + + ++++  ++ +p++R++a+++l 
  MMETSP1325-20131115|7500_1   4 DLVRgRDGGVAEVVAIEVVVPVLHALAHLHARGFAHRDVKSENVLVDYTEDGqdglqvvdvRLIDFDLCRSVNHVPPADTRWCGARGFMAPEMLTNTVVDHTKLDVWSSACVLLELVMGSVWFEQEwlriyrefrwqgdpT-------TPANLGRIVRLSERAVHARNscqhPGVVEMLRGSMHVNPTARMSAQDALD 194
                 56666778889999999******************************66666779****************99999999****************999***********************99999988887755554333.......3333333333333333333344448999*****************99986 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   3.4e-14   9.4e-11     106     201 ..      19     122 ..       6     196 .. 0.79

  Alignments for each domain:
  == domain 1    score: 41.2 bits;  conditional E-value: 3.4e-14
                 HHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET.........TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEE.EHHHHHHH---HHHHHHTT CS
  PF07714.12 106 lkfalqiakGmeyLeskklvHrdLaarNvLlee.........ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkf.tsksDvWsfGvllwEiftl 201
                 +++++ + +++++L+++ + Hrd+ + NvL++             v++ Df L+r++  ++   ++++      +mapE+l+++++  +k DvWs  ++l E++  
  MMETSP1325-20131115|7500_1  19 IEVVVPVLHALAHLHARGFAHRDVKSENVLVDYtedgqdglqVVDVRLIDFDLCRSV--NHVPPADTRWCGARGFMAPEMLTNTVVdHTKLDVWSSACVLLELVMG 122
                 567788889**********************98888888874457999*********..333455555567788********999725799************984 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.6e-07     0.001     130     170 ..      28      74 ..       9      85 .. 0.88
   2 ?   -2.0   0.0      0.49   1.3e+03      48      63 ..     123     138 ..     103     161 .. 0.65

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 3.6e-07
   PF06293.9 130 liakmhragvnHtdlnahnilldeee......ekakvwliDldkarr 170
                 + a +h++g +H+d    n+l+d +e      +  +v liD+d +r 
  MMETSP1325-20131115|7500_1  28 ALAHLHARGFAHRDVKSENVLVDYTEdgqdglQVVDVRLIDFDLCRS 74 
                 6789*******************9999999999999*******9985 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.49
   PF06293.9  48 lyrfklgetrsvrEfr 63 
                 +++f+ + +r++rEfr
  MMETSP1325-20131115|7500_1 123 SVWFEQEWLRIYREFR 138
                 3444444455555554 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   2.9e-06     0.008     157     188 ..      27      58 ..       7      74 .. 0.69
   2 ?   -2.3   0.0      0.95   2.6e+03      74      79 ..     128     133 ..      84     167 .. 0.55

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.9e-06
                 HHHHHCSS--EEB-SS-SGGGEEEE...TTTTEEE CS
  PF01636.18 157 aallpgaeppvllHgDlhpgNllvd...pddgrvg 188
                 +al +   ++++ H+D ++ N+lvd   +  g+ g
  MMETSP1325-20131115|7500_1  27 HALAHL-HARGFAHRDVKSENVLVDyteD--GQDG 58 
                 444443.59*****************652..4432 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.95
                 EE---H CS
  PF01636.18  74 leyvpg 79 
                 +e++ +
  MMETSP1325-20131115|7500_1 128 QEWLRI 133
                 333222 PP

>> PF02958.15  Ecdysteroid kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.13   3.6e+02     115     132 ..      20      37 ..      15      38 .. 0.80
   2 ?   13.1   0.2   1.3e-05     0.034     216     248 ..      37      73 ..      32      78 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.13
  PF02958.15 115 ehlklvlkkLAkfHAasl 132
                 e +  vl+ LA +HA  +
  MMETSP1325-20131115|7500_1  20 EVVVPVLHALAHLHARGF 37 
                 567789*********865 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 1.3e-05
  PF02958.15 216 LnHGDlwvnNimfkydeeg....epedvilvDFQlsr 248
                 + H D+++ N+++ y+e g    ++ dv+l+DF l+r
  MMETSP1325-20131115|7500_1  37 FAHRDVKSENVLVDYTEDGqdglQVVDVRLIDFDLCR 73 
                 68**************99988999***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 963.43
//
Query:       MMETSP1325-20131115|7503_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.7   0.0      0.037   13.7   0.0    1.5  1  PF01417.15 ENTH domain


Domain annotation for each model (and alignments):
>> PF01417.15  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.7e-06     0.037      45     123 ..       6      90 ..       2      92 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.7e-06
  PF01417.15  45 tkrLqndkgkewrsvlKaLtvleYLlknGseqviddlkdnisiiktlsrfky..i....de.tgkdkginiRkkakkiislledpe 123
                 +  L + +++    +lKa +v+e+ ++ G e+++d ++d    +  l +++   +        g+d+g+ +R ka  + ++l d +
  MMETSP1325-20131115|7503_1   6 KSAL-DPQQNTPQTLLKAVIVVEHFVRFGAERCVDFAWDASREVDALVQYNSalVkgnfGTkGGRDNGEPVRLKAGPLSKFLADAD 90 
                 5556.6667777889********************999999988888777532111111222567777778888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       577  (0.042203); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 1127.70
//
Query:       MMETSP1325-20131115|7502_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-32  112.0   0.0    2.6e-32  111.8   0.0    1.0  1  PF00920.16 Dehydratase family


Domain annotation for each model (and alignments):
>> PF00920.16  Dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.8   0.0   1.9e-36   2.6e-32     433     521 .]       2      92 ..       1      92 [. 0.98

  Alignments for each domain:
  == domain 1    score: 111.8 bits;  conditional E-value: 1.9e-36
  PF00920.16 433 litDGRfSGaskglvighvsPEAaagGpialvrdgDiieiDie..nrelnlevseeelaeRraelkppekkkkrgllakyaklvssaeeGa 521
                 l+tDGRfSG+s+g++igh++PEA+ gGpialv+dgD i+iD++  +r++++++s+ee+++Rr+++kpp+ + + g+l ky k+v +a+eG+
  MMETSP1325-20131115|7502_1   2 LLTDGRFSGGSHGFCIGHITPEAQIGGPIALVEDGDPIRIDARpdKRTIDMLISDEEWERRRKAWKPPPLRASYGTLYKYIKNVATASEGC 92 
                 89****************************************8789********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 703.28
//
Query:       MMETSP1325-20131115|7505_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 446.38
//
Query:       MMETSP1325-20131115|7506_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 850.95
//
Query:       MMETSP1325-20131115|7504_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-19   67.8   0.2    6.1e-16   58.3   0.0    2.2  2  PF03143.12 Elongation factor Tu C-terminal domain
    4.3e-09   36.2   0.6    1.3e-08   34.7   0.5    1.8  2  PF03144.20 Elongation factor Tu domain 2


Domain annotation for each model (and alignments):
>> PF03143.12  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00055       3.8      49      71 ..      53      75 ..      29      83 .. 0.73
   2 !   58.3   0.0     9e-20   6.1e-16       2      96 ..      89     198 ..      88     199 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00055
  PF03143.12 49 sekkefvkpGdnvkvevelikpi 71
                +  ++ vkpGdnv v+v l+++ 
  MMETSP1325-20131115|7504_1 53 EVAVRSVKPGDNVAVRVALKQED 75
                334499************99854 PP

  == domain 2    score: 58.3 bits;  conditional E-value: 9e-20
  PF03143.12   2 ikahtkfkAqvyvlnk...ptpikagYrpvlyvrTadvtgkivellkkld.sekk......efvkpGdnvkvevelikpiavekgk......rFaiReggrTvavGvvtev 96 
                 ++a+t+f+Aq+ ++     ++ ++agY ++l+++T++ ++ + +ll+ +d +  k      +f+k+G ++++ +e+ ++i++  +       rF++R++g+ +a+G+v ++
  MMETSP1325-20131115|7504_1  89 ARAVTRFTAQLALVDLletRSLFTAGYDCMLHIHTCETEVVVGRLLTIIDnK-TKaekkfpRFAKTGSTITCILEVPQSIVIAPYAqapqlgRFTLRDEGQSIAIGMVLKL 198
                 67899*****998776666*********************999999999962.3346789************************999*********************886 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.5   1.9e-12   1.3e-08       1      72 [.      17      81 ..      17      83 .. 0.85
   2 ?   -2.5   0.0      0.76   5.2e+03      13      34 ..     161     180 ..     153     182 .. 0.66

  Alignments for each domain:
  == domain 1    score: 34.7 bits;  conditional E-value: 1.9e-12
                EEEEEEEEEE--EETTEEEEEETTTCTEEEEEEEEEEEEETTCEESEEECEE--EEEESSSGGGGGTT---E CS
  PF03144.20  1 GtvatgrvysGtlkkGdtvrilgndtskkeivtrvrsletfngdldeavaganaGvivaikgledaiikGdt 72
                Gtv+ g+v+sG l kGd++ +  + t+ +   trv  ++     ++ + +g+n+ v va+k+  d i kG  
  MMETSP1325-20131115|7504_1 17 GTVIIGKVESGLLTKGDEIKL--MPTGMT---TRVVNVYSNEVAVRSVKPGDNVAVRVALKQE-D-ICKGFM 81
                9********************..555344...***************************9543.3.556655 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.76
                 EETTEEEEEET.TTCTEEEEEEE CS
  PF03144.20  13 lkkGdtvrilg.ndtskkeivtr 34 
                 l++ + ++i++     + ++++r
  MMETSP1325-20131115|7504_1 161 LEVPQSIVIAPyA---QAPQLGR 180
                 5566788887755...5566666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1065.05
//
Query:       MMETSP1325-20131115|7508_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   10.5   0.2       0.15   10.4   0.1    1.0  1  PF07350.7 Protein of unknown function (DUF1479)


Domain annotation for each model (and alignments):
>> PF07350.7  Protein of unknown function (DUF1479)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   1.1e-05      0.15     301     336 ..      16      52 ..       8      55 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 1.1e-05
   PF07350.7 301 aqelseelhphL.elkktlvsiPdveaGdyvvWhcDl 336
                   + + ++ p+L + +k+lv iPdv+a  +v+W  Dl
  MMETSP1325-20131115|7508_1  16 RVSNTWATCPQLwDNSKKLVLIPDVTADRMVWWWKDL 52 
                 455555667877457899***************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|7507_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-08   32.1   0.0    1.4e-07   31.6   0.0    1.3  1  PF12796.2  Ankyrin repeats (3 copies)
    5.8e-07   28.8   0.0    3.6e-05   23.2   0.0    2.4  2  PF00023.25 Ankyrin repeat
    8.2e-05   22.9   0.0    0.00014   22.1   0.0    1.4  1  PF13637.1  Ankyrin repeats (many copies)
      0.001   18.9   0.0     0.0035   17.3   0.0    1.9  2  PF13606.1  Ankyrin repeat
     0.0068   16.5   0.0      0.011   15.8   0.0    1.3  1  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   5.1e-11   1.4e-07      45      85 ..       1      41 [.       1      45 [. 0.95

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 5.1e-11
   PF12796.2 45 LleagadvnakdkegntpLhlAvrnghlelvklLlekgadv 85
                L+eaga+v++ +k+g tpL++A ++gh+++v+ L+e+ga+v
  MMETSP1325-20131115|7507_1  1 LVEAGASVDQANKNGATPLYIAGQKGHFKVVHALVEAGASV 41
                899***********************************987 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.024        67      21      33 .]       1      13 [.       1      13 [. 0.89
   2 !   23.2   0.0   1.3e-08   3.6e-05       1      29 [.      14      42 ..      14      46 .. 0.93

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.024
                HHHTTSSTTHBHT CS
  PF00023.25 21 LlsqGAdlnaqdd 33
                L+++GA+++  ++
  MMETSP1325-20131115|7507_1  1 LVEAGASVDQANK 13
                899******9885 PP

  == domain 2    score: 23.2 bits;  conditional E-value: 1.3e-08
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdln 29
                +G TPL +A ++g+ +vv  L+++GA++ 
  MMETSP1325-20131115|7507_1 14 NGATPLYIAGQKGHFKVVHALVEAGASVP 42
                799************************95 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0     5e-08   0.00014      20      54 .]       1      35 [.       1      35 [. 0.95

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 5e-08
   PF13637.1 20 LlekgidinrtdesGntaLhiAalrgnieilklLl 54
                L+e g+++++ +++G t+L+iA ++g++++++ L+
  MMETSP1325-20131115|7507_1  1 LVEAGASVDQANKNGATPLYIAGQKGHFKVVHALV 35
                7899***************************9995 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.9   7.8e+03      21      29 ..       1       9 [.       1      10 [. 0.82
   2 !   17.3   0.0   1.3e-06    0.0035       1      28 [.      14      41 ..      14      43 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 2.9
   PF13606.1 21 Llengadin 29
                L+e+ga ++
  MMETSP1325-20131115|7507_1  1 LVEAGASVD 9 
                789999886 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 1.3e-06
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadi 28
                nG TpL++A ++g+ ++v+aL+e+ga +
  MMETSP1325-20131115|7507_1 14 NGATPLYIAGQKGHFKVVHALVEAGASV 41
                789**********************986 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     4e-06     0.011       1      41 [.       1      40 [.       1      45 [. 0.92

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4e-06
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgad 41
                L+e+g a+v++ +++g tpL++A  +g+  vv  L+++ga+
  MMETSP1325-20131115|7507_1  1 LVEAG-ASVDQANKNGATPLYIAGQKGHFKVVHALVEAGAS 40
                899**.*****************************988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 568.55
//
Query:       MMETSP1325-20131115|7509_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 714.21
//
Query:       MMETSP1325-20131115|7510_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 526.26
//
Query:       MMETSP1325-20131115|7512_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 380.85
//
Query:       MMETSP1325-20131115|7511_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.53    9.6   5.4       0.72    9.1   3.7    1.3  1  PF04484.7 Family of unknown function (DUF566)


Domain annotation for each model (and alignments):
>> PF04484.7  Family of unknown function (DUF566)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.7   5.3e-05      0.72      21     118 ..      14     115 ..       3     187 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 5.3e-05
   PF04484.7  21 srrrlsskrflsetassrlealnapasprssssarklssssseklskkkesslargllssrsvspsrasasaaasangslatssdsass.......spsrsrrvt 118
                  ++ +s k  +s+ + +r+++++++  +  sssa+k++ + +   s   ++ ++++ ++++s++ps+a a+a+a+a++++a+++ +ass        p+ + +  
  MMETSP1325-20131115|7511_1  14 GKKQASVKDLFSAERPKRSRPRDDTVASDGSSSATKVLFTPE---SSPTKKLKVEVESPTPSAKPSKATAAAKAKATKATAKAKVEASSssepppfVPVYIHKKV 115
                 444444555567777899999999999999999998887776...566677777777788888888877777777777777666655555533355444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       608  (0.0444705); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.43s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 1451.64
//
Query:       MMETSP1325-20131115|7514_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0044   16.6   0.0     0.0056   16.2   0.0    1.3  1  PF09759.4  Spinocerebellar ataxia type 10 protein domain
      0.007   16.0   0.0        2.3    8.0   0.0    2.3  2  PF00514.18 Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
      0.088   12.3   0.2       0.13   11.7   0.2    1.3  1  PF12488.3  Protein of unknown function (DUF3704)


Domain annotation for each model (and alignments):
>> PF09759.4  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.2e-06    0.0056      17      67 ..       3      53 ..       1      80 [. 0.90

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.2e-06
   PF09759.4 17 nkevqdkvreldglaliLsntriDdenPflkEwailairnLlennkenqel 67
                nk+vq  + + +  +++L++ +  +  P+l++wa++a+ nL +  + n+ +
  MMETSP1325-20131115|7514_1  3 NKDVQTIILDEGFAEVLLEALEWYQLHPGLNQWALWALFNLAYGHQSNKVY 53
                899****************************************99999865 PP

>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0005       2.3       9      40 ..      11      44 ..       3      45 .. 0.75
   2 !    6.0   0.0    0.0022       9.8       2      26 ..      48      73 ..      47      78 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0005
                HHCHHHHHHHHHHC..-SSHHHHHHHHHHHHHHH CS
  PF00514.18  9 ieaGavppLvqLLk..sgdeevqeeAawALsNLa 40
                 ++G  ++L++ L     ++++ + A+wAL NLa
  MMETSP1325-20131115|7514_1 11 LDEGFAEVLLEALEwyQLHPGLNQWALWALFNLA 44
                3777777777777777888888888********8 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0022
                HHHHHHHHHCHHHHHHHHHHC.-SSH CS
  PF00514.18  2 penkqavieaGavppLvqLLk.sgde 26
                ++nk ++++ Gav + v+ +k +++e
  MMETSP1325-20131115|7514_1 48 QSNKVYMVKKGAVGAVVSAMKrHPKE 73
                689*****************998876 PP

>> PF12488.3  Protein of unknown function (DUF3704)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2     3e-05      0.13      10      24 ..      53      67 ..      52      68 .. 0.97

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3e-05
   PF12488.3 10 YMplSviaGsslsgv 24
                YM++ + +G+++s++
  MMETSP1325-20131115|7514_1 53 YMVKKGAVGAVVSAM 67
                9************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|7513_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 155.55
//
Query:       MMETSP1325-20131115|7515_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-06   26.8   2.2    6.1e-06   26.4   0.5    1.8  2  PF13879.1 KIAA1430 homologue


Domain annotation for each model (and alignments):
>> PF13879.1  KIAA1430 homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.5   4.5e-10   6.1e-06      65      97 ..      21      53 ..       1      54 [. 0.74
   2 ?   -0.2   0.0     0.086   1.2e+03      66      81 ..      75      90 ..      64      94 .. 0.64

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 4.5e-10
   PF13879.1 65 skvsqkkslnlskRkkeqqkIdeENqkllkRle 97
                +++ ++ s+n+ +R+++ +kI++ENqk+ +Rl 
  MMETSP1325-20131115|7515_1 21 YERPKHMSSNAINRRRKEDKIARENQKIANRLR 53
                2334558999*********************96 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.086
   PF13879.1 66 kvsqkkslnlskRkke 81
                +++++k+ n+  ++k+
  MMETSP1325-20131115|7515_1 75 EPWRRKNNNSALKQKK 90
                5566666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       590  (0.0431539); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 430.46
//
Query:       MMETSP1325-20131115|7518_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   14.0   0.4      0.033   13.5   0.3    1.2  1  PF13263.1 PHP-associated


Domain annotation for each model (and alignments):
>> PF13263.1  PHP-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.3   2.4e-06     0.033      20      39 ..      19      38 ..      15      48 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.4e-06
   PF13263.1 20 gGSDAHrleeVGrayTefee 39
                gGSDAH  ++V r++T++++
  MMETSP1325-20131115|7518_1 19 GGSDAHAHPDVHRGATLVSA 38
                9***************9943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|7517_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-26   91.3   0.0    1.6e-17   62.9   0.0    2.3  2  PF00085.15 Thioredoxin
    2.9e-07   30.5   0.3      0.032   14.3   0.1    2.7  2  PF13098.1  Thioredoxin-like domain
      7e-07   29.2   0.2      0.023   14.7   0.0    2.5  3  PF13905.1  Thioredoxin-like
     0.0002   21.2   0.1      0.021   14.7   0.0    2.6  2  PF13899.1  Thioredoxin-like
    0.00029   20.3   0.3       0.15   11.6   0.1    2.5  2  PF00578.16 AhpC/TSA family
     0.0014   18.5   0.1       0.23   11.3   0.0    2.3  2  PF13462.1  Thioredoxin
  ------ inclusion threshold ------
      0.017   14.5   0.4       0.78    9.1   0.0    2.2  2  PF08534.5  Redoxin


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.0   8.2e-21   1.6e-17      20     102 ..       2      97 ..       1      99 [. 0.84
   2 !   26.4   0.0   1.9e-09   3.8e-06       2      49 ..     126     177 ..     125     201 .. 0.75

  Alignments for each domain:
  == domain 1    score: 62.9 bits;  conditional E-value: 8.2e-21
                 CEEEEEE-TT---HHHHHHHHHHHHHHTT-.......TSEEEEEETTTTHH.HH.....HHTT--SSSEEEEESSSSEEEEE---.-HHHHHHHHH CS
  PF00085.15  20 lvlvefyApwCGhCkalaPeyeklaeelke.......kvvlakvdvdenkd.la.....seygvegiPtlklfkngkkveevegarekeklvaflk 102
                 lvl efyApwCGhC+++aP+y ++a ++++        v++ak+d  ++ +  a     + ++ +++P l +fk+gk  + + g+re e+lv++++
  MMETSP1325-20131115|7517_1   2 LVLMEFYAPWCGHCQEMAPKYREAAAQMAAkkselatPVKFAKLDDGDEYNrEArfgaeDMFNYSSYPALFIFKDGKMDSPYYGGREVEDLVDHMT 97 
                 699***********************999889999999******9765444033122224578899**************************9886 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 1.9e-09
                 EEESSHHHHHHHHHH....HHSCEEEEEE-TT---HHHHHHHHHHHHHHTT- CS
  PF00085.15   2 vlvltkenfeeevak....sdklvlvefyApwCGhCkalaPeyeklaeelke 49 
                 v++l+ e+f+e++      +++ ++vefy++ C  C++l+Pe+ k+ae+l++
  MMETSP1325-20131115|7517_1 126 VAELEPETFNETLVTpatnDNTVWIVEFYSDRCPFCQSLSPEIIKAAESLTT 177
                 677888899998866443357999*******************999998876 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   1.6e-05     0.032       8      95 ..       3      79 ..       1      96 [. 0.56
   2 !   13.5   0.0   2.8e-05     0.056       8      46 ..     149     193 ..     142     199 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.6e-05
   PF13098.1  8 vivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleek..elgrklgvrgtPtivfldgeGkl 95
                v++ f +p+C+ C+ + ++ ++ ++ +   k+   ++ v++ k ++        d+   ++  e+       ++ ++ P+++++ ++Gk+
  MMETSP1325-20131115|7517_1  3 VLMEFYAPWCGHCQEMAPKYREAAA-QMAAKKSELATPVKFAKLDD-------GDE---YN-REArfGAEDMFNYSSYPALFIF-KDGKM 79
                67789***********999986333.22222222223333332221.......111...12.2231123456788888888888.47874 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 2.8e-05
   PF13098.1   8 vivvftdpdCpyCkklhkelkklnd.vtkyl.....kdkfeviyv 46 
                  iv f ++ Cp+C+ l +e+ k ++ +t  +     k++++++++
  MMETSP1325-20131115|7517_1 149 WIVEFYSDRCPFCQSLSPEIIKAAEsLTTQYkeageKKNVRIAAL 193
                 57889***************9988774444435555555555555 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.2e-05     0.023       3      33 ..       2      32 ..       1      38 [. 0.86
   2 ?   -2.5   0.0       2.8   5.4e+03      76      90 ..      60      74 ..      28      78 .. 0.70
   3 !   11.9   0.0   8.5e-05      0.17       2      44 ..     147     195 ..     146     200 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.2e-05
   PF13905.1  3 ivllyfaaswcppckaftpelkelyeklkas 33
                +vl+ f+a+wc++c++ +p+  e   ++ a+
  MMETSP1325-20131115|7517_1  2 LVLMEFYAPWCGHCQEMAPKYREAAAQMAAK 32
                68999*****************999998863 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.8
   PF13905.1 76 kklykvkaiPtlvvl 90
                  +++ +++P l++ 
  MMETSP1325-20131115|7517_1 60 EDMFNYSSYPALFIF 74
                556777777877775 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 8.5e-05
   PF13905.1   2 kivllyfaaswcppckaftpelkelyeklka......skdkveivyVsl 44 
                  + ++ f+++ cp c++  pe+ +  e+l        +k++v+i ++++
  MMETSP1325-20131115|7517_1 147 TVWIVEFYSDRCPFCQSLSPEIIKAAESLTTqykeagEKKNVRIAALNS 195
                 57799******************98888876566688889999988876 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.1e-05     0.021      20      80 ..       3      74 ..       2      76 .. 0.55
   2 ?    4.0   0.0     0.024        47      15      36 ..     144     165 ..     131     176 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.1e-05
   PF13899.1 20 llvifgadwcpdCqaldrdvlsdeevkaalaekfvllrvdv.......terdanl...eldr.qg..vPvvvfl 80
                +l+ f+a wc++Cq ++    +    +++ a+k +l   +        +e ++++   + d+ ++  +P+++++
  MMETSP1325-20131115|7517_1  3 VLMEFYAPWCGHCQEMAPKYREA--AAQMAAKKSELATPVKfaklddgDEYNREArfgAEDMfNYssYPALFIF 74
                7999***********97664333..2222333333332222233433655666664443333544678888887 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.024
   PF13899.1  15 eegkpllvifgadwcpdCqald 36 
                   +   +v f++d cp Cq l 
  MMETSP1325-20131115|7517_1 144 NDNTVWIVEFYSDRCPFCQSLS 165
                 444444679**********885 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.1   7.7e-05      0.15      28      61 ..       3      35 ..       1      38 [. 0.87
   2 !    6.6   0.0    0.0026       5.1      25      56 ..     146     176 ..     124     195 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.7e-05
  PF00578.16 28 vvLffypkdfcpvCttelpalaelyeefkkkgve 61
                v++ fy+  +c +C++ +p+++e++ ++++k+ e
  MMETSP1325-20131115|7517_1  3 VLMEFYAP-WCGHCQEMAPKYREAAAQMAAKKSE 35
                67779999.******************9998765 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0026
  PF00578.16  25 gkpvvLffypkdfcpvCttelpalaelyeefk 56 
                 + + ++ fy+   cp+C+   p++ +++e ++
  MMETSP1325-20131115|7517_1 146 NTVWIVEFYSD-RCPFCQSLSPEIIKAAESLT 176
                 44556777777.******99999999888765 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.0    0.0088        17      16      41 ..       3      28 ..       1      53 [. 0.86
   2 !   11.3   0.0   0.00012      0.23      12      36 ..     145     169 ..     143     193 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0088
   PF13462.1 16 tvieyadltCphCarfheevekllek 41
                +++e+  + C hC ++  ++++  ++
  MMETSP1325-20131115|7517_1  3 VLMEFYAPWCGHCQEMAPKYREAAAQ 28
                6899*************999987766 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00012
   PF13462.1  12 dApvtvieyadltCphCarfheeve 36 
                 d  v ++e+ + +Cp+C  +  e+ 
  MMETSP1325-20131115|7517_1 145 DNTVWIVEFYSDRCPFCQSLSPEII 169
                 77899*************9988753 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0    0.0004      0.78      31      62 ..       3      33 ..       2      38 .. 0.75
   2 ?    3.6   0.0      0.02        40      26      57 ..     143     178 ..     120     195 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0004
                EEEE---------IIIIIHHHHTHHHH.HH-- CS
   PF08534.5 31 vvlvfvpgafcptCsaehpyleklaklakekg 62
                v++ f++  +c+ C++ +p  ++ a++ ++k+
  MMETSP1325-20131115|7517_1  3 VLMEFYAP-WCGHCQEMAPKYREAAAQMAAKK 33
                56779999.**********5555555556665 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.02
                 HTTSEEEEE---------IIIIIH....HHHTHHHH CS
   PF08534.5  26 fkgkkvvlvfvpgafcptCsaehp....yleklakl 57 
                 +++++v +v + +  cp C+   p      e l+ +
  MMETSP1325-20131115|7517_1 143 TNDNTVWIVEFYSDRCPFCQSLSPeiikAAESLTTQ 178
                 56677777777777*****99888443444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       527  (0.0385459); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 953.84
//
Query:       MMETSP1325-20131115|7520_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   12.5   1.0      0.091   11.9   0.7    1.3  1  PF08799.6 pre-mRNA processing factor 4 (PRP4) like


Domain annotation for each model (and alignments):
>> PF08799.6  pre-mRNA processing factor 4 (PRP4) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.7   6.7e-06     0.091      19      29 ..      48      58 ..      47      59 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.7e-06
   PF08799.6 19 dadRreRLrkL 29
                +adRreRLrkL
  MMETSP1325-20131115|7520_1 48 NADRRERLRKL 58
                69********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 409.56
//
Query:       MMETSP1325-20131115|7521_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        66  (0.00482738); expected 273.4 (0.02)
Passed bias filter:                       63  (0.00460796); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|7516_1  [L=384]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-38  131.4   0.0    3.5e-38  131.0   0.0    1.0  1  PF01704.13 UTP--glucose-1-phosphate uridylyltransferase


Domain annotation for each model (and alignments):
>> PF01704.13  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   0.0   2.6e-42   3.5e-38     104     345 ..      18     272 ..      14     302 .. 0.87

  Alignments for each domain:
  == domain 1    score: 131.0 bits;  conditional E-value: 2.6e-42
                 ----EEEEE----HHHHHHHHHH..T----GG.EEEEE---EE-B-----B-EEETTEE-EE--.....-----HHHHHHTTHHHHHHH----EEEEEETTB.T--TT-TTT---TTT----E-EEEE---STT-----EEEE---EEE--GGGS-HH......HHH--BSS-----...EEEHHHHHHHHHTTG..GG.---EEE-----EE-........---EEE--....GGGGGGG-SSEEEEE-H.HH--B--SS CS
  PF01704.13 104 vdvPlllmnSfnTeeetkkilek..Ysglkve.iktfqQsryPriskdsllpvekkakesmakdeWYPpGhGdlfrslaasglldellaqGkeyifvsnvdN.LgavvDlkilnfviekkieylmevtektkadvkgGvlisydgklrllevaqvskekvdefksaskfklfNtnNi...wvnlkavkrlvesee..lk.leiivnqkkitykd........egikvlqletaigaaikqFekslgveVpR.drflpvktt 345
                 +++P+++m+S   +e t++ + +  Y+glk e +++f Q+ +P+++ ++++++ + ++ s a     P G+G+++++l  sg+ld l+a+G  +++v  vdN + +v D+ ++++++ +++  + +v+ k  a +k+Gv+++ +g+  ++e++++ +e +    +a+   l+ ++Ni   +++l++++++  ++   ++ l+++ ++kk++y          e  + ++le+ i ++    + s  +eV R ++f+pvk++
  MMETSP1325-20131115|7516_1  18 TEIPFVVMTSPLNHETTTNYFAQnsYFGLKEEqVRFFPQGTLPALTPEGKIVMTNGSTLSEA-----PDGNGGIYDALRVSGTLDVLEARGVRSVHVFSVDNaICKVCDPLFIGYCLGQGAAVGNKVVWKASAGEKVGVVAKRNGRPAIIEYSELGEE-MAAKVDAEGKLLYGAGNIcnhYFTLAFLRQVATAYResPQvLPYHLAKKKVPYAGedgntvvpETPNAVKLEAFIFDSFPLAASSAILEVNReEEFSPVKNA 272
                 68********999999999888779*****999********************997766655.....55*****************************************************************************************.555567788899999999999**********987641233499**********99778888877777778866665555555566666****999*****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.33s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 1957.87
//
Query:       MMETSP1325-20131115|7525_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|7526_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.16   11.4   3.5       0.18   11.2   2.4    1.0  1  PF07074.7  Translocon-associated protein, gamma subunit (TRAP-gamma)
       0.26   11.1  11.0       0.28   11.0   7.6    1.0  1  PF05680.7  ATP synthase E chain
        1.3    8.4   3.9        1.3    8.3   2.7    1.0  1  PF01956.11 Integral membrane protein DUF106
        2.1    7.9   8.4        2.3    7.8   5.8    1.0  1  PF08496.5  Peptidase family S49 N-terminal
        4.7    7.8   8.6        5.3    7.7   6.0    1.1  1  PF09598.5  Stm1


Domain annotation for each model (and alignments):
>> PF07074.7  Translocon-associated protein, gamma subunit (TRAP-gamma)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   2.4   6.5e-05      0.18      63     103 ..       7      47 ..       2      52 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.5e-05
   PF07074.7  63 alayknvkfllkhkiaikreeavtrevnrkladdkklsrke 103
                 a++  n k++  +k  +kr++a+++e ++ + +  k+s++ 
  MMETSP1325-20131115|7526_1   7 ATTIANEKAKAEEKTRKKRDAAIQKEKAEAAKQGTKVSKQR 47 
                 66788********************************9975 PP

>> PF05680.7  ATP synthase E chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   7.6    0.0001      0.28      33      77 ..      10      54 ..       3      57 .] 0.85

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0001
   PF05680.7 33 kakakkeekereyeaqekliekakaayakkkqakseakslaegss 77
                 a++k++++e+  +++ + i+k+ka+ ak+  + s+ +s+ +gs+
  MMETSP1325-20131115|7526_1 10 IANEKAKAEEKTRKKRDAAIQKEKAEAAKQGTKVSKQRSAYQGSN 54
                457888888888899999**********************99996 PP

>> PF01956.11  Integral membrane protein DUF106
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.7   0.00049       1.3      45      87 ..       3      45 ..       1      52 [. 0.75

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00049
  PF01956.11 45 ykkrekeiqkrarelqkngdklklkklekrkeelkedqkemmm 87
                ++ r  +i ++  +++++ +k+++++++k+k+e  ++  ++++
  MMETSP1325-20131115|7526_1  3 AQVRATTIANEKAKAEEKTRKKRDAAIQKEKAEAAKQGTKVSK 45
                5777888888888888888888888888888888777666655 PP

>> PF08496.5  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   5.8   0.00084       2.3      56      98 ..       3      46 ..       1      51 [. 0.85

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00084
   PF08496.5 56 eeleealldkeelkalekeekkeekekkkaekkkakkaee.kkp 98
                 +++++++ +e++ka+ek++kk++ + +k++ ++ak++++ +k+
  MMETSP1325-20131115|7526_1  3 AQVRATTIANEKAKAEEKTRKKRDAAIQKEKAEAAKQGTKvSKQ 46
                57899999******************999999999998865554 PP

>> PF09598.5  Stm1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   6.0    0.0019       5.3      22      64 ..      12      55 ..       3      57 .] 0.75

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0019
   PF09598.5 22 tkelvkksttskkrdkp.kaPnkpaPreqadrerRgrqapsg.ne 64
                  + +++++t kkrd++ +   k+  ++q+ + +++r+a++g ne
  MMETSP1325-20131115|7526_1 12 NEKAKAEEKTRKKRDAAiQKE-KAEAAKQGTKVSKQRSAYQGsNE 55
                44568999*******996654.5666667788999999***9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1588  (0.11615); expected 273.4 (0.02)
Passed bias filter:                      898  (0.0656817); expected 273.4 (0.02)
Passed Vit filter:                        98  (0.00716793); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.48s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 267.83
//
Query:       MMETSP1325-20131115|7529_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|7528_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 1155.39
//
Query:       MMETSP1325-20131115|7523_1  [L=526]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-62  209.3   3.4    9.4e-62  209.0   2.3    1.0  1  PF04547.7  Calcium-activated chloride channel
  ------ inclusion threshold ------
      0.025   13.3   0.2      0.025   13.3   0.2    2.1  2  PF02714.10 Domain of unknown function DUF221
        6.5    6.2   7.2         36    3.8   1.1    3.4  3  PF11120.3  Protein of unknown function (DUF2636)


Domain annotation for each model (and alignments):
>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.0   2.3   2.1e-65   9.4e-62     167     451 ..      33     338 ..      18     339 .. 0.85

  Alignments for each domain:
  == domain 1    score: 209.0 bits;  conditional E-value: 2.1e-65
   PF04547.7 167 kilnavlitilnevYkklAkwltdlEnhrtqseyensliiKvflfqfvnsylslfyiaFfkk........lrqeecksdlerLkeqlatllitkqll.qnitevllPylkerlrkv...............kvkekkeeksed.....esekeeeekesleqaekeselqtyevsgtfddylemviqfGyvvLFsaafPlapllalinniieirsdafklltelrRpvpqraesIGqWqkilellgvlavitNafliaftsdgqlqrllndlslaarlllvvvlehvvlllkyliavlipdipewvreelkree 451
                   l+ +l++++  ++k +A+ lt lEnh t+s+y n li Kvf f+fv  ++slfy aF           + qe +++ + r+   l  ++ ++  + + + ++ lP  ++++r                 +++++++    d      +++    k+  +++ +e +++ y+   tfddy+ +++qfGyv  Fs++fPl+pll l+n +++ir+da+kl+ + +Rp++++  sIG+W ++l+l+ v+avitN+ +i++ts  ql   ++ ls   r ll++++ehv+l++ yl++v+ p ip +v+++l+r++
  MMETSP1325-20131115|7523_1  33 PTLYGLLVPVFYVLFKVVAVQLTGLENHVTNSQYRNGLIWKVFSFKFVIVFSSLFYYAFNVTpatiddldMAQEAVEDSMFRIAVSLLCFITVSHWFqKYFIQLYLPRGIHKWRIFwrgthlrderlslqtSLHNSGH----DkdtrtLQNQRRYLKQASSKVWEEVMMKGYD---TFDDYTILLVQFGYVACFSMVFPLVPLLSLLNAVVQIRMDAYKLCRTRQRPIAEKSGSIGVWDNVLQLMVVCAVITNCSMIGLTS-LQLRINFPGLSSMDRALLMITVEHVLLFIGYLMQVIYPRIPPSVQRALARDR 338
                 568999*****************************************************9999999999888888888999999999988888887746777888898888888885444444444422222222222....1222222224455555555666666666666...89**********************************************************************************9.999999999***************************************9986 PP

>> PF02714.10  Domain of unknown function DUF221
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   4.6     0.024   1.1e+02     111     174 ..      38      99 ..      24     138 .. 0.73
   2 ?   13.3   0.2   5.5e-06     0.025     224     324 ..     182     284 ..     177     285 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.024
  PF02714.10 111 lllslllallpiilrllskleGaltrsevelsvqskyfaFlvvnvflvvtlastalslieeiid 174
                 ll+ ++++l+ ++   l+ le ++t+s+    ++ k+f F +v vf  ++l+  a+++    id
  MMETSP1325-20131115|7523_1  38 LLVPVFYVLFKVVAVQLTGLENHVTNSQYRNGLIWKVFSFKFVIVF--SSLFYYAFNVTPATID 99 
                 67789*************************************9877..5666666666555555 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 5.5e-06
  PF02714.10 224 kflsktprdkaerktkppefqygtvypqflliftialiYsviaPlilpfgliyfllkylvykYqllyvyvtky.esgGk..lwpralnrllvglylfqllligl 324
                 ++l+++  +++e    ++ ++    y  +l+ f  + ++s++ Pl+ +++l+  ++++ ++ Y+l    + +  e+ G   +w ++l+ ++v+ ++ ++ +igl
  MMETSP1325-20131115|7523_1 182 RYLKQASSKVWEEV-MMKGYDTFDDYTILLVQFGYVACFSMVFPLVPLLSLLNAVVQIRMDAYKLCRTRQRPIaEKSGSigVWDNVLQLMVVCAVITNCSMIGL 284
                 56677777778766.7777888888899999999999*********************************555488885338*********************8 PP

>> PF11120.3  Protein of unknown function (DUF2636)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       0.3   1.4e+03      41      49 ..     180     188 ..     172     194 .. 0.72
   2 ?    3.8   1.1    0.0078        36       5      17 ..     265     277 ..     263     305 .. 0.85
   3 ?    3.3   0.2     0.012        53      17      43 ..     312     338 ..     301     356 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.3
   PF11120.3  41 kPRYlKpag 49 
                 + RYlK a+
  MMETSP1325-20131115|7523_1 180 QRRYLKQAS 188
                 569***998 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.0078
   PF11120.3   5 divqlvllcAlif 17 
                 +++ql ++cA+i+
  MMETSP1325-20131115|7523_1 265 NVLQLMVVCAVIT 277
                 589*********7 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.012
   PF11120.3  17 ffpLgylarrslrrlrqtlrllllkPR 43 
                  + +gyl+++  +r+   +++ l++ R
  MMETSP1325-20131115|7523_1 312 LLFIGYLMQVIYPRIPPSVQRALARDR 338
                 4557************99999999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       651  (0.0476156); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.48s 00:00:01.28 Elapsed: 00:00:00.73
# Mc/sec: 1726.69
//
Query:       MMETSP1325-20131115|7532_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       486  (0.0355471); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.49s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 530.96
//
Query:       MMETSP1325-20131115|7519_1  [L=943]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-40  138.8   0.6      2e-40  138.4   0.4    1.2  1  PF00225.18 Kinesin motor domain
    1.2e-17   64.4   3.1    1.2e-17   64.4   2.2    2.0  2  PF12697.2  Alpha/beta hydrolase family
    1.8e-15   56.8   0.1    5.3e-15   55.3   0.1    1.8  1  PF12695.2  Alpha/beta hydrolase family
      1e-06   28.3   0.1    1.7e-06   27.6   0.0    1.4  1  PF00561.15 alpha/beta hydrolase fold
     0.0078   15.9   0.1       0.04   13.6   0.0    2.1  2  PF12146.3  Putative lysophospholipase


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.4   0.4   7.4e-44     2e-40     168     332 ..       2     169 ..       1     172 [. 0.94

  Alignments for each domain:
  == domain 1    score: 138.4 bits;  conditional E-value: 7.4e-44
                 ECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT..............TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHH CS
  PF00225.18 168 vkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaen.............kkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaera 332
                 v gl+ + v+s++e+ +ll+++++nr +a+t+ln++SSRSHai+t+ + +++            skl+LvDLAGsEr+++++  ++  lkEa++IN SL+ L rv++aL+ +               + hvpY+d  L +lL+d+Lggn   ++++t+sp+ +++ et stL+fa  +
  MMETSP1325-20131115|7519_1   2 VPGLSLHAVSSTDELEALLARAAENRITAHTALNSTSSRSHAIITLYFDREDG---------VYSKLHLVDLAGSERIKQSKV-DGTGLKEATSINLSLFHLARVVQALQLQqqqqqqqqqpkakALRVHVPYKDDALSHLLKDALGGNGTGVLLATLSPALTHAIETRSTLSFALCC 169
                 899*********************************************99872.........479*****************6.6777*********************988899******99877899*********************************************9766 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       2.7   7.3e+03      40      65 ..     194     219 ..     191     228 .. 0.56
   2 !   64.4   2.2   4.6e-21   1.2e-17       2     191 ..     275     481 ..     274     507 .. 0.68

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 2.7
                 --S...S--HHHHHHHHHHHHHH--. CS
   PF12697.2  40 rppdydpdtledlaadlaalldalgl 65 
                 +pp++++ + +  a+++a++++al +
  MMETSP1325-20131115|7519_1 194 HPPPPPKPSRAASARAAARAAQALPW 219
                 44444555555566666666666554 PP

  == domain 2    score: 64.4 bits;  conditional E-value: 4.6e-21
                 EE--------.----H.HHHHH.TTTSEEEEE-----------S.....S--HHHH.....HHHHHHHHHH--...--EEEE--------HHHHHH----...EEEEEEE------STT...............---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH--GGGG....GG------HHHHTT-.-S-EEEEE-----HHH CS
   PF12697.2   2 vllHGlggsa.eswrp.laeaL.aagyrvvapDlpGhGrSdrpp.d.ydpdtledl.....aadlaalldalgl..rpvvlvGHSlGgavalaaaarrpd..lvrglvlidppgplpas...............alrpagpsllrrllagraaalrdlaarafarlfdgdelealvradaaalaellraalldadlrealarl.dvPvlviageaDrvvp 191
                 vllHG++++a ++w   l++aL +ag+rvva+D+pG+G S++ p +  + ++   l     a+ +aal+dal +  +++vl+G ++Gg +al +a++r +  +v+++v++ p  +  +                +     ++ + +++++ +  l+++++++ + ++  de ++  ++  +a++++l+    + d+ +a++++ ++P+ ++++++   ++
  MMETSP1325-20131115|7519_1 275 VLLHGYPSDAaGCWGGwLIPALvHAGFRVVAIDMPGCGCSPGVPlRtRSEHN---LvsggpADIVAALIDALVPagTRAVLIGSDWGGGIALSMAHSRKHrhRVQSVVAVLPSYSEVEKdeltriksevmvlwsK-----DDQFHNWAKWKP-NLKKIPRATAYVAARCDEAAWSYKSRERAIVKFLT----GVDYMPAAQQVvTAPTQIVTSTHGVKAT 481
                 9******99989***76899**779****************98832333333...1333446677888888877778******************9966666************555545555555555332220.....233333333332.23444444444444444444444556666666664....4566566666559999999998776655 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.1   1.9e-18   5.3e-15       2     134 ..     274     430 ..     273     446 .. 0.85

  Alignments for each domain:
  == domain 1    score: 55.3 bits;  conditional E-value: 1.9e-18
   PF12695.2   2 vvlvhGaggdssa.ye.plaealakrgfavvavdlpghgasegaa................aakrvlaadlldleriilvGhSlGGgvalelag..rd.drvkglvllap.f..pdgedlakltlpvllihGtrDgvvppeeaeklakalpgdaelv 134
                  vl+hG+ +d+++ +  +l  al+++gf+vva+d+pg g s g++                 ++++++a  +   r +l+G   GGg+al +a   ++  rv+++v++ p +   ++++l++++  v++++ ++D++ + ++++  +k++p ++ +v
  MMETSP1325-20131115|7519_1 274 AVLLHGYPSDAAGcWGgWLIPALVHAGFRVVAIDMPGCGCSPGVPlrtrsehnlvsggpadIVAALIDALVPAGTRAVLIGSDWGGGIALSMAHsrKHrHRVQSVVAVLPsYseVEKDELTRIKSEVMVLWSKDDQFHNWAKWKPNLKKIPRATAYV 430
                 69********8887877999*********************8888888777777777777544444455555888******************9664468********9976555599*******************************99665554 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   6.2e-10   1.7e-06       1      80 [.     301     399 ..     301     580 .. 0.78

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 6.2e-10
                 SEEEEEE--------E.....S.GGGGSHHHHHHHHHHHHHHSTSSS..EEEEE-B---HHHHHHHHHCGG..GEEEEEEESB--.............H CS
  PF00561.15   1 fdviglDlrGvgySspa..ggpelphyttddlardleavldalglkk..ltlvGhSmGGmialayaaeypd..rvkamvllgtva.............v 80 
                 f+v+++D++G+g S+      +  ++      a  + a++dal      ++l+G ++GG ial +a   ++  rv+++v++ +++              
  MMETSP1325-20131115|7519_1 301 FRVVAIDMPGCGCSPGVplRTRSEHNLVSGGPADIVAALIDALVPAGtrAVLIGSDWGGGIALSMAHSRKHrhRVQSVVAVLPSYsevekdeltriksE 399
                 9**************6444444455555555678999999999999999******************999999**********8444333333333330 PP

>> PF12146.3  Putative lysophospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   1.5e-05      0.04      18      62 ..     273     319 ..     259     332 .. 0.76
   2 ?   -1.8   0.0      0.94   2.6e+03       6      33 ..     413     442 ..     411     449 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.5e-05
   PF12146.3  18 avvlvhgl.aEhsgrYqe.laedLaaqGyavyayDhrGhGksegerg 62 
                 + vl+hg+  + +g +   l+ +L+++G++v+a+D  G G s+g   
  MMETSP1325-20131115|7519_1 273 LAVLLHGYpSDAAGCWGGwLIPALVHAGFRVVAIDMPGCGCSPGVPL 319
                 5677777755666655554899********************98544 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.94
   PF12146.3   6 yrrwlpeep..pkaavvlvhglaEhsgrYq 33 
                 + +w+p+ +  p+a+  ++ +  E ++ Y+
  MMETSP1325-20131115|7519_1 413 WAKWKPNLKkiPRATAYVAARCDEAAWSYK 442
                 789999977789999999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (943 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.31u 0.42s 00:00:01.73 Elapsed: 00:00:00.74
# Mc/sec: 3053.74
//
Query:       MMETSP1325-20131115|7533_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|7531_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-40  137.6   0.1    1.7e-40  136.9   0.0    1.3  1  PF02777.13 Iron/manganese superoxide dismutases, C-terminal domain
      8e-33  112.4   0.5    2.1e-31  107.8   0.2    2.3  2  PF00081.17 Iron/manganese superoxide dismutases, alpha-hairpin domain


Domain annotation for each model (and alignments):
>> PF02777.13  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.9   0.0   2.5e-44   1.7e-40       1     105 [.     123     228 ..     123     229 .. 0.97

  Alignments for each domain:
  == domain 1    score: 136.9 bits;  conditional E-value: 2.5e-44
                 -S----HHHHHHHH---HHHHHHHHHHHHHT------EEEEEETTTTEEEEEE-STTTBG.GGTTEEEEEEE--SGGGTHHHHTTHHHHHHHHHGGGB-HHHHHHH CS
  PF02777.13   1 gePkgelaeaieedfGsfdefkeefeaaaaalfgsgWawlvkdkeegklkivktenqdnp.llegltplltiDvwEHayYldyknarpdyleafwnvvnWdevekr 105
                 geP+gela+ i+++fGsfd++k++++a+++a++gsgW+wl +dk++++++i++++nqd   +++gl+pl++iDvwEHayYldykn+rpdy++a+w++ nW++v++r
  MMETSP1325-20131115|7531_1 123 GEPEGELADLINAKFGSFDAMKSQLSASTVAVQGSGWGWLGYDKATNSVAIATCANQDPLeATTGLVPLFGIDVWEHAYYLDYKNVRPDYVSAIWQLANWEDVAAR 228
                 69********************************************************8658999**************************************987 PP

>> PF00081.17  Iron/manganese superoxide dismutases, alpha-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.026   1.8e+02       3      16 ..       3      16 ..       2      28 .. 0.77
   2 !  107.8   0.2   3.1e-35   2.1e-31       3      82 .]      36     115 ..      35     115 .. 0.98

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.026
                -----SSSTTTTTT CS
  PF00081.17  3 eLpeLpYaydaLeP 16
                +Lp+LpY y  L  
  MMETSP1325-20131115|7531_1  3 TLPDLPYGYGELRS 16
                69*******99875 PP

  == domain 2    score: 107.8 bits;  conditional E-value: 3.1e-35
                 -----SSSTTTTTTTS-HHHHHHHHHTHHHHHHHHHHHHHHCHHHHCCTHHHHHHHHCHHHHHHCHHHHHHHHHHHHTB- CS
  PF00081.17   3 eLpeLpYaydaLePhisketlelHhdkHhktYvnnlNkalekleeakkkleelilkklekalrnnagghvnHslfwknls 82 
                 +Lp+LpY y  LeP+is e++elHh+kHh+tYv+nlN a ekl+ a++k++ +++ +++ a+++n+ggh+nHs+fw+nl+
  MMETSP1325-20131115|7531_1  36 TLPDLPYGYGELEPVISGEIMELHHSKHHNTYVTNLNLATEKLADATEKGDVTTIVQMQAAIKFNGGGHLNHSIFWQNLA 115
                 69****************************************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 1094.81
//
Query:       MMETSP1325-20131115|7530_1  [L=343]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.33s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 1826.56
//
Query:       MMETSP1325-20131115|7534_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-35  122.2   0.0    2.4e-35  121.9   0.0    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.9   0.0   1.8e-39   2.4e-35       2     155 ..      50     198 ..      49     199 .. 0.86

  Alignments for each domain:
  == domain 1    score: 121.9 bits;  conditional E-value: 1.8e-39
                 XXXXXXXXXXXXXXXXXXX.----TTTTT--------TTT------------------S--TT--...STT-----.--S-TT.THHHH---HHHHHHHHTT-----------------------------------STTT----TTTTT------- CS
  PF00504.16   2 paeldgslpgdlgfDplglskdptlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpa..waeaggls.lptllalqillligflelareqelkapesegsekraypGglgfdplglakdeeekaelklkEiknGRlAMiaflgfvvqa 155
                 p  ldgs++gd+gfDplg+++  ++++lreaE++HGR++ la++G+ +++l+ +l++   ++++++  +a   ++  +++++  q l++ g++e+++   + +     + +  +pG++  dplg+ k++e  a++klkEi+++RlAM+af g+v qa
  MMETSP1325-20131115|7534_1  50 PPALDGSMAGDVGFDPLGFTNWIDVRWLREAEIKHGRICQLAIVGFAATDLGFRLPG---EMHQVSsiLA--HDVAlKYGAMN-QLLIWLGLFEVFSLVAIFQMLF--EDSGRQPGDFKLDPLGFCKTPELEADYKLKEITHCRLAMFAFSGMVTQA 198
                 678****************97779***************************999765...4455553322..21223777777.************9999987655..557899*****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1083.57
//
Query:       MMETSP1325-20131115|7535_1  [L=585]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-11   41.3  15.0    7.2e-05   22.4   0.1    5.6  5  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.3      0.15   2.1e+03      14      21 ..      87      94 ..      78     101 .. 0.84
   2 !    4.1   0.0    0.0029        40      23      36 ..     222     235 ..     207     237 .. 0.83
   3 !   22.4   0.1   5.2e-09   7.2e-05       8      38 ..     250     287 ..     244     287 .. 0.97
   4 !   15.5   0.6   7.9e-07     0.011       3      36 ..     356     389 ..     354     390 .. 0.94
   5 !    5.1   0.0    0.0015        21       7      33 ..     534     559 ..     530     564 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.15
                EEEEEEES CS
  PF00400.27 14 Vtcvafsp 21
                V+ +++sp
  MMETSP1325-20131115|7535_1 87 VSQCSWSP 94
                899****9 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0029
                 STEEEEEETTSEEE CS
  PF00400.27  23 gpllasgSrDgtir 36 
                  +ll+sg +D t++
  MMETSP1325-20131115|7535_1 222 ERLLVSGFWDDTVK 235
                 589**********9 PP

  == domain 3    score: 22.4 bits;  conditional E-value: 5.2e-09
                 ESSSSSEEEEEEESS.......STEEEEEETTSEEEEE CS
  PF00400.27   8 rgHtspVtcvafspd.......gpllasgSrDgtirlW 38 
                  gH+++++c+a+  d        ++l++g+ D t+r+W
  MMETSP1325-20131115|7535_1 250 GGHQGAINCIAVGKDhfersddLRCLVTGGQDATVRVW 287
                 69************************************ PP

  == domain 4    score: 15.5 bits;  conditional E-value: 7.9e-07
                 EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEE CS
  PF00400.27   3 ckatlrgHtspVtcvafspdgpllasgSrDgtir 36 
                 c ++l gH+ pV +va+s    +++sgS Dg i 
  MMETSP1325-20131115|7535_1 356 CCHVLWGHEVPVVSVAVSTLLDVVVSGSTDGVIV 389
                 999****************************986 PP

  == domain 5    score: 5.1 bits;  conditional E-value: 0.0015
                 EESSSSSEEEEEEESSSTEEEEEETTS CS
  PF00400.27   7 lrgHtspVtcvafspdgpllasgSrDg 33 
                 l+ H ++++c+ ++p+++ ++ +  Dg
  MMETSP1325-20131115|7535_1 534 LSSH-GAIRCMVVAPEQQDIILATGDG 559
                 7889.***********65555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.92u 0.33s 00:00:01.25 Elapsed: 00:00:00.59
# Mc/sec: 2376.05
//
Query:       MMETSP1325-20131115|7539_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|7536_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-17   62.4   5.3      8e-17   61.0   3.6    1.8  1  PF01529.15 DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   3.6   5.8e-21     8e-17      55     172 ..     118     229 ..      46     231 .. 0.79

  Alignments for each domain:
  == domain 1    score: 61.0 bits;  conditional E-value: 5.8e-21
  PF01529.15  55 qtikpprshHCriCnkCvlkfDhHCpwvnncIGarNhkyFllfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllfllafhlylilrnmTtieele 172
                     p r+ +C+  +k v+kfDh+C+++n  IG++Nh  F++fl++ t+l++ a+++  + f++ + + ++  v++      ++ vv+  ++ll++++l +fh +l++ ++Tt+e+++
  MMETSP1325-20131115|7536_1 118 DSFPPMRTIYCKAKGKYVAKFDHFCMFLNTPIGEKNHCLFWWFLFFETMLICEAIAILKTGFHWFYGDHSTAIVQA------MIEVVILDLILLLIGGLWLFHSFLAIVSLTTYEFMR 229
                 56679***********************************************************988877776664......677788888899999999***************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.33s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1238.12
//
Query:       MMETSP1325-20131115|7540_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|7541_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-09   36.7   0.0    1.8e-09   36.6   0.0    1.0  1  PF00503.15 G-protein alpha subunit
  ------ inclusion threshold ------
      0.015   14.0   0.0      0.019   13.7   0.0    1.1  1  PF08367.6  Peptidase M16C associated


Domain annotation for each model (and alignments):
>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.0   2.7e-13   1.8e-09     294     384 ..       3      91 ..       1      96 [. 0.86

  Alignments for each domain:
  == domain 1    score: 36.6 bits;  conditional E-value: 2.7e-13
                 EEEEEEEXHHHHHHHTTTSXGGSGGGTTXX.XX..HHHHHHHHHHHHHHHHHHHHTXXGSXEEEEEXXTTXHHHHHHHHHHHHHHHHHHHHH CS
  PF00503.15 294 piiLflNKlDileeKlkkgpklskyfpsye.gdrendyesaskylrnkfkeinrensenrkiythftsatdtenvrkvfaavrdiilrenlk 384
                 +++L+++K Di+++K+  +  + +yf++   g +  +ye+a+ ++++++  +  + +  r+i++ +++a+  ++ + + + ++  i++  lk
  MMETSP1325-20131115|7541_1   3 SVVLIFTKDDIFRKKIALDS-IGNYFTKAPqGIKGCNYETALRFIQQRYRTCDPNPN--RTIHMKVVNAITGDSAELIEEVLQAAIIETGLK 91 
                 79****************96.********99555679****************9988..***********8777777766666666666655 PP

>> PF08367.6  Peptidase M16C associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.7e-06     0.019     146     224 ..      43     121 ..      36     132 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.7e-06
   PF08367.6 146 vsvssdakdtkklelslaisgkaLnskveklfeliseilnetdfddeerlkelieesasslensiadsGhsyAasraas 224
                 + ++++ ++t +++++  i+ k  n  +++  eli+e+l+ + +++  +++ +i+++ ++  +++a+ + +  + ++++
  MMETSP1325-20131115|7541_1  43 LRFIQQRYRTCDPNPNRTIHMKVVNAITGDSAELIEEVLQAAIIETGLKIRDIINAREAARAAQVASLPVKTSRLMSTR 121
                 67888999999******************************************************99998888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|7542_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 703.93
//
Query:       MMETSP1325-20131115|7546_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 1238.97
//
Query:       MMETSP1325-20131115|7547_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-15   54.2  21.1    2.6e-07   29.9   4.1    2.3  3  PF12799.2  Leucine Rich repeats (2 copies)
      3e-14   52.4   9.0    7.9e-10   38.2   4.3    2.0  2  PF13855.1  Leucine rich repeat
    3.1e-05   23.2   7.3      0.019   14.7   0.4    3.7  4  PF00560.28 Leucine Rich Repeat
    7.2e-05   22.2   5.3       0.01   15.7   0.1    3.5  3  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.024   14.5   5.8         10    6.4   0.0    3.2  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.2   2.3e-08   6.2e-05      15      44 .]       3      33 ..       2      33 .. 0.89
   2 !   29.9   4.1   9.7e-11   2.6e-07       1      40 [.      13      51 ..      13      57 .. 0.91
   3 !   21.9   1.3   3.1e-08   8.4e-05       3      40 ..      37      75 ..      35      76 .. 0.93

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 2.3e-08
   PF12799.2 15 dlpp.elanLpnLktLnLsnNpisdlsaLan 44
                +lp  ++ +L++L++L L++N+++ l++L+n
  MMETSP1325-20131115|7547_1  3 ELPDgTFDKLTSLRYLGLDHNRLEQLPSLEN 33
                67754799*********************97 PP

  == domain 2    score: 29.9 bits;  conditional E-value: 9.7e-11
   PF12799.2  1 tnLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdls 40
                t+L++L L +N++++lp  l nL++L++L ++nN + +l+
  MMETSP1325-20131115|7547_1 13 TSLRYLGLDHNRLEQLPS-LENLKDLTMLAIQNNELNSLT 51
                79****************.*****************9994 PP

  == domain 3    score: 21.9 bits;  conditional E-value: 3.1e-08
   PF12799.2  3 LevLdLsnNnIkdlppe.lanLpnLktLnLsnNpisdls 40
                L++L ++nN + +l  + l +L+   ++++s+N+is ++
  MMETSP1325-20131115|7547_1 37 LTMLAIQNNELNSLTSSaLLKLKRVVSIDVSHNNISQVD 75
                99************9877*****************9875 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0     1e-07   0.00028      38      61 .]       2      25 ..       1      25 [. 0.93
   2 !   38.2   4.3   2.9e-13   7.9e-10       1      61 []      13      71 ..      13      71 .. 0.98

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 1e-07
   PF13855.1 38 ksispeafkgLpsLreLnLsgNrl 61
                +++++++f++L+sLr+L L++Nrl
  MMETSP1325-20131115|7547_1  2 TELPDGTFDKLTSLRYLGLDHNRL 25
                68999*****************98 PP

  == domain 2    score: 38.2 bits;  conditional E-value: 2.9e-13
   PF13855.1  1 pnLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                ++L++L L++Nrl+ +p  ++++l+ L+ L +++n+l+s+ + a+ +L+++ ++++s+N++
  MMETSP1325-20131115|7547_1 13 TSLRYLGLDHNRLEQLP--SLENLKDLTMLAIQNNELNSLTSSALLKLKRVVSIDVSHNNI 71
                58***************..9***************************************98 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.1   2.9e+03      14      22 .]       3      12 ..       2      12 .. 0.81
   2 !   14.7   0.4   7.1e-06     0.019       1      22 []      14      34 ..      14      34 .. 0.95
   3 ?    4.1   0.2     0.022        60       2      21 ..      37      57 ..      36      58 .. 0.82
   4 !    6.5   0.0    0.0037        10       4      14 ..      63      73 ..      60      76 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 1.1
                CHHHH.HHHH CS
  PF00560.28 14 slpps.lsnL 22
                +lp++ + +L
  MMETSP1325-20131115|7547_1  3 ELPDGtFDKL 12
                7999999886 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 7.1e-06
                TESEEEETSSBCBCHHHHHHHH CS
  PF00560.28  1 nLeeLdLsgNnltslppslsnL 22
                +L++L L++N+l++lp+ l+nL
  MMETSP1325-20131115|7547_1 14 SLRYLGLDHNRLEQLPS-LENL 34
                79***************.9997 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.022
                ESEEEETSSBCBCHHHH.HHH CS
  PF00560.28  2 LeeLdLsgNnltslpps.lsn 21
                L+ L +++N l sl +s l +
  MMETSP1325-20131115|7547_1 37 LTMLAIQNNELNSLTSSaLLK 57
                6778899******99987766 PP

  == domain 4    score: 6.5 bits;  conditional E-value: 0.0037
                EEEETSSBCBC CS
  PF00560.28  4 eLdLsgNnlts 14
                ++d+s+Nn+++
  MMETSP1325-20131115|7547_1 63 SIDVSHNNISQ 73
                79*******96 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   3.8e-06      0.01       1      17 []      13      29 ..      13      29 .. 0.96
   2 ?    4.8   0.3     0.016        44       2      16 ..      33      50 ..      30      52 .. 0.66
   3 ?    2.6   0.0     0.082   2.2e+02       7      15 ..      65      73 ..      53      75 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 3.8e-06
   PF13504.1  1 pnLkeLdLsgnrLtsLP 17
                ++L++L L +nrL++LP
  MMETSP1325-20131115|7547_1 13 TSLRYLGLDHNRLEQLP 29
                69**************9 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.016
   PF13504.1  2 nLkeLd...LsgnrLtsL 16
                nLk+L    + +n+L+sL
  MMETSP1325-20131115|7547_1 33 NLKDLTmlaIQNNELNSL 50
                566664222689998887 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.082
   PF13504.1  7 dLsgnrLts 15
                d+s+n++ +
  MMETSP1325-20131115|7547_1 65 DVSHNNISQ 73
                89***9987 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.017        48       1      15 [.      12      26 ..      12      31 .. 0.87
   2 ?    4.6   1.2     0.014        39       2      22 ..      29      55 ..      28      57 .. 0.67
   3 ?    6.4   0.0    0.0037        10       3      16 ..      60      73 ..      58      76 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.017
   PF13516.1  1 lknLtsLdLsnNqig 15
                l++L++L L +N + 
  MMETSP1325-20131115|7547_1 12 LTSLRYLGLDHNRLE 26
                689*********986 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.014
   PF13516.1  2 knLtsLd......LsnNqigdeGlsaL 22
                ++L++L       ++nN + +   saL
  MMETSP1325-20131115|7547_1 29 PSLENLKdltmlaIQNNELNSLTSSAL 55
                666666333455568999999988888 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.0037
   PF13516.1  3 nLtsLdLsnNqigd 16
                   s+d+s+N+i++
  MMETSP1325-20131115|7547_1 60 RVVSIDVSHNNISQ 73
                56799*******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 369.04
//
Query:       MMETSP1325-20131115|7548_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-05   22.3   1.1      0.019   14.7   0.0    2.2  2  PF07719.12 Tetratricopeptide repeat
    0.00014   21.9   0.2     0.0061   16.8   0.0    2.1  2  PF13174.1  Tetratricopeptide repeat
      0.002   17.5   0.7     0.0047   16.4   0.5    1.6  1  PF13414.1  TPR repeat
     0.0021   18.5   3.7      0.023   15.2   0.0    2.6  2  PF08238.7  Sel1 repeat
     0.0054   17.2   3.8      0.012   16.1   2.6    1.6  1  PF13432.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.018   14.8   0.1          1    9.2   0.0    2.1  2  PF13424.1  Tetratricopeptide repeat
      0.021   15.3   2.9        1.7    9.3   0.3    2.2  2  PF13428.1  Tetratricopeptide repeat
      0.065   13.3   0.0       0.41   10.8   0.0    2.1  2  PF13431.1  Tetratricopeptide repeat
       0.17   11.6   1.2         16    5.5   0.0    2.2  2  PF13176.1  Tetratricopeptide repeat
       0.42   10.5   2.9        4.7    7.1   0.2    2.1  2  PF12688.2  Tetratrico peptide repeat


Domain annotation for each model (and alignments):
>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.4e-05     0.019       3      29 ..      20      46 ..      18      47 .. 0.92
   2 !    6.7   0.1    0.0051         7      11      30 ..      59      78 ..      56      79 .] 0.88

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.4e-05
                HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAle 29
                a +n G a++k+gd e A++ fe A +
  MMETSP1325-20131115|7548_1 20 AMFNAGVAALKAGDQETAKNKFEAAAR 46
                789*********************976 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0051
                HHHTT-HHHHHHHHHHHHHH CS
  PF07719.12 11 yyklgdyeeAleafekAlel 30
                +++++++++A+e+++ A +l
  MMETSP1325-20131115|7548_1 59 LIEKDEPARAVELYRAAAAL 78
                6788999**********987 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   4.5e-06    0.0061       2      33 .]      20      52 ..      19      52 .. 0.95
   2 ?    3.5   0.0     0.075     1e+02       6      26 ..      56      75 ..      54      78 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 4.5e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHH.-TT- CS
   PF13174.1  2 AlyklalsyyklgdtdeAlealerlike.yPdS 33
                A+++++ + +k+gd + A+  +e   ++ +P+S
  MMETSP1325-20131115|7548_1 20 AMFNAGVAALKAGDQETAKNKFEAAARKgHPKS 52
                9**********99************99999987 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.075
                HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAlealerl 26
                l+l+ +k  ++++A+e+++  
  MMETSP1325-20131115|7548_1 56 LGLLIEKD-EPARAVELYRAA 75
                55555555.999*****9975 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.5   3.4e-06    0.0047       2      67 ..      17      78 ..      16      79 .] 0.90

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 3.4e-06
   PF13414.1  2 nAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                ++ a +++G a++k+gd + A  ++e A +    +++   nl+l+ +k   ++ +A+e y+ A +l
  MMETSP1325-20131115|7548_1 17 TPVAMFNAGVAALKAGDQETAKNKFEAAARKG--HPKSVHNLGLLIEKD--EPARAVELYRAAAAL 78
                567899**********************9976..8*************5..5899****9999765 PP

>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.9     0.095   1.3e+02       2      39 .]      19      49 ..      18      49 .. 0.49
   2 !   15.2   0.0   1.7e-05     0.023      16      38 ..      57      79 .]      53      79 .] 0.88

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.095
   PF08238.7  2 eAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 A++n G+  +++ G      d e A   +e AA++Gh
  MMETSP1325-20131115|7548_1 19 VAMFNAGV-AALKAG------DQETAKNKFEAAARKGH 49
                57777772.222444......34444444666666665 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 1.7e-05
   PF08238.7 16 GlgGvpkd.pekAleWyekAAeqG 38
                Gl+ ++kd p++A+e+y+ AA++G
  MMETSP1325-20131115|7548_1 57 GLL-IEKDePARAVELYRAAAALG 79
                764.89999*************98 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   2.6   8.9e-06     0.012       2      60 ..      23      78 ..      22      79 .] 0.90

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 8.9e-06
   PF13432.1  2 alArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalal 60
                  + a+l+aGd + A + +eaa ++   ++    +l+ +  ++ ++++A++l+raa+al
  MMETSP1325-20131115|7548_1 23 NAGVAALKAGDQETAKNKFEAAARKG--HPKSVHNLGLLI-EKDEPARAVELYRAAAAL 78
                5789**********************..888******999.666***********9875 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00073         1      43      72 ..      15      44 ..       5      46 .. 0.86
   2 ?    3.9   0.0     0.034        47       9      33 ..      54      77 ..      49      78 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00073
   PF13424.1 43 pdtaralnnlanlylalgdydeAleylekA 72
                 +t +a++n + + l++gd++ A++ +e A
  MMETSP1325-20131115|7548_1 15 KETPVAMFNAGVAALKAGDQETAKNKFEAA 44
                68999******************9988887 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.034
   PF13424.1  9 nnlalvlrrlgdydeAlelyekale 33
                +nl+l+  ++ +  +A ely+ a +
  MMETSP1325-20131115|7548_1 54 HNLGLL-IEKDEPARAVELYRAAAA 77
                466666.456777777777777765 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.1    0.0066         9       7      34 ..      24      52 ..      18      61 .. 0.81
   2 ?    9.3   0.3    0.0013       1.7      10      30 ..      58      78 ..      56      79 .] 0.86

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0066
   PF13428.1  7 larallalGdpdeAiallrralal.aPdd 34
                 + a l +Gd + A + +++a+++ +P++
  MMETSP1325-20131115|7548_1 24 AGVAALKAGDQETAKNKFEAAARKgHPKS 52
                6788999**************98745765 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0013
   PF13428.1 10 allalGdpdeAiallrralal 30
                +l++  +p++A++l+r+a+al
  MMETSP1325-20131115|7548_1 58 LLIEKDEPARAVELYRAAAAL 78
                5778899***********986 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0    0.0003      0.41      13      33 ..      18      38 ..      13      39 .. 0.92
   2 ?   -0.4   0.0       1.1   1.6e+03      12      22 ..      49      59 ..      42      64 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.0003
   PF13431.1 13 adaynnLAelllnnGdleeAe 33
                ++a++n +++ l++Gd+e+A+
  MMETSP1325-20131115|7548_1 18 PVAMFNAGVAALKAGDQETAK 38
                789*****************8 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 1.1
   PF13431.1 12 nadaynnLAel 22
                ++ + +nL++l
  MMETSP1325-20131115|7548_1 49 HPKSVHNLGLL 59
                56667788875 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.011        16       2      28 ..      21      45 ..      20      55 .. 0.84
   2 ?    5.4   0.2     0.012        16      14      28 ..      64      78 ..      52      79 .] 0.78

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.011
   PF13176.1  2 llnLarlysrlgdyekAielyeraLal 28
                 +n +++  + gd e+A + +e+  a 
  MMETSP1325-20131115|7548_1 21 MFNAGVAALKAGDQETAKNKFEA--AA 45
                67999999**********99999..54 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.012
   PF13176.1 14 dyekAielyeraLal 28
                +  +A+ely++a al
  MMETSP1325-20131115|7548_1 64 EPARAVELYRAAAAL 78
                6789******97665 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.2    0.0035       4.7       2      33 ..      19      50 ..      18      59 .. 0.89
   2 ?    4.4   0.1     0.024        32      16      31 ..      64      79 .]      57      79 .] 0.87

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0035
   PF12688.2  2 ealferagarDstGeeakAvplYrrAlaaGLa 33
                +a+f+++ a   +G++++A + ++ A  +G  
  MMETSP1325-20131115|7548_1 19 VAMFNAGVAALKAGDQETAKNKFEAAARKGHP 50
                789***********************999965 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.024
   PF12688.2 16 eeakAvplYrrAlaaG 31
                e+a+Av+lYr A a G
  MMETSP1325-20131115|7548_1 64 EPARAVELYRAAAALG 79
                6899*******98866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|7549_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-23   80.9   0.0    1.1e-22   80.7   0.0    1.0  1  PF02338.14 OTU-like cysteine protease
    0.00094   18.4   0.0       0.62    9.2   0.0    2.0  2  PF10275.4  Peptidase C65 Otubain


Domain annotation for each model (and alignments):
>> PF02338.14  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.0   1.6e-26   1.1e-22       2      84 ..       3      83 ..       2      95 .. 0.92

  Alignments for each domain:
  == domain 1    score: 80.7 bits;  conditional E-value: 1.6e-26
                ----HHHHHHHHHH-----HHHHHHHHHHSS--HHHH-------------............-HHHHHHHHHHHHHHTS-EEE CS
  PF02338.14  2 gDGnCLfhavsqqlwldhdgrkekheelrealveylrehrelfeefleeeeeeYlkeiskdgewgeeieifalahilrrpiiv 84
                 DGnCLfh+v++q++++ d   + h++lr  +v y+ ++r++f+ +++++++eYlk  +++g+wg+++ei ala+i+ rp+ v
  MMETSP1325-20131115|7549_1  3 RDGNCLFHSVAHQIYGVLD--TDAHRQLRADCVGYMNTNRAHFSLYVDGNFDEYLKSRAQPGVWGDNLEIVALAEIFDRPVEV 83
                5**************8877..889*********************************************************99 PP

>> PF10275.4  Peptidase C65 Otubain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0   0.00021       1.4      48      62 ..       3      17 ..       1      32 [. 0.80
   2 !    9.2   0.0     9e-05      0.62     143     203 ..      29      84 ..      21      90 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00021
   PF10275.4 48 gDGnCfYrafafsyl 62
                +DGnC++ ++a +  
  MMETSP1325-20131115|7549_1  3 RDGNCLFHSVAHQIY 17
                9*********99854 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 9e-05
   PF10275.4 143 RlltsaeikenadeykpfideldlltveefCeqeVepvnkeadnvqikaLaealgipvrve 203
                 R    +++ +n+ +++ ++d+    + +e+ +++  + +   dn++i aLae+++ pv+v+
  MMETSP1325-20131115|7549_1  29 RADCVGYMNTNRAHFSLYVDG----NFDEYLKSR-AQPGVWGDNLEIVALAEIFDRPVEVW 84 
                 555678999999999999975....799999888.6667889*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|7544_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-15   54.7  57.5    2.1e-06   27.0   7.5    7.3  8  PF07699.8 GCC2 and GCC3
    1.2e-08   34.4  40.9      0.077   12.6   1.0    7.3  7  PF07562.9 Nine Cysteines Domain of family 3 GPCR


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.017   1.1e+02      21      44 ..      76      99 ..      71     102 .. 0.71
   2 !    7.7   0.3   0.00034       2.3      10      23 ..     151     164 ..     144     169 .. 0.86
   3 !   16.7   0.5     5e-07    0.0034       9      36 ..     175     202 ..     168     209 .. 0.86
   4 !    5.8   0.2    0.0013       9.2       8      20 ..     207     219 ..     200     224 .. 0.63
   5 !   27.0   7.5   3.1e-10   2.1e-06       1      48 []     216     263 ..     216     263 .. 0.90
   6 !   10.4   3.4   4.9e-05      0.34       7      35 ..     256     283 ..     250     284 .. 0.78
   7 !   17.0   3.4   4.2e-07    0.0029       1      35 [.     266     299 ..     266     301 .. 0.90
   8 !    8.1   3.6   0.00026       1.8       1      31 [.     298     328 ..     298     330 .. 0.94

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.017
   PF07699.8 21 neegqkkCiaCppgttTskkgsks 44
                + ++   C +C + ++ ++ g+k 
  MMETSP1325-20131115|7544_1 76 SLSNTHVCANCKADHVADHVGAKH 99
                455556788888888888888875 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.00034
   PF07699.8  10 kCepCprGtYknee 23 
                  C+ C++G Y+n++
  MMETSP1325-20131115|7544_1 151 SCSICGIGKYSNYT 164
                 7***********96 PP

  == domain 3    score: 16.7 bits;  conditional E-value: 5e-07
   PF07699.8   9 kkCepCprGtYkneegqkkCiaCppgtt 36 
                  kC++Cp G +++  g + C +C  g+ 
  MMETSP1325-20131115|7544_1 175 RKCTLCPAGRFSKDPGAGACPMCEEGKL 202
                 59**********************9975 PP

  == domain 4    score: 5.8 bits;  conditional E-value: 0.0013
   PF07699.8   8 nkkCepCprGtYk 20 
                  + C +Cp Gt+ 
  MMETSP1325-20131115|7544_1 207 RSLCGECPAGTFV 219
                 3468888888884 PP

  == domain 5    score: 27.0 bits;  conditional E-value: 3.1e-10
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttT.skkgsksesdC 48 
                 Gt+  k+ k Ce Cp GtY ++++ +kC+ C +g +T  ++g++  s C
  MMETSP1325-20131115|7544_1 216 GTFVYKK-KSCEVCPSGTYAPQAQTDKCLDCAAGFYTgTEQGATACSSC 263
                 7777555.59************************9997789***99999 PP

  == domain 6    score: 10.4 bits;  conditional E-value: 4.9e-05
   PF07699.8   7 gnkkCepCprGtYkneegqkkCiaCppgt 35 
                 g   C+ C  GtY+ e++ ++C++C +gt
  MMETSP1325-20131115|7544_1 256 GATACSSCDGGTYS-EGNAVSCLSCAAGT 283
                 45789*******96.57778999999886 PP

  == domain 7    score: 17.0 bits;  conditional E-value: 4.2e-07
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgt 35 
                 Gty++ +   C  C  GtY+  ++++ C+aC  g+
  MMETSP1325-20131115|7544_1 266 GTYSEGNAVSCLSCAAGTYSGGSSST-CTACDTGK 299
                 9******************9877776.****9986 PP

  == domain 8    score: 8.1 bits;  conditional E-value: 0.00026
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaC 31 
                 G+y+  g+  C+ C  G Y +++  ++C +C
  MMETSP1325-20131115|7544_1 298 GKYSGVGEPSCTSCTAGRYVQKSAATECYNC 328
                 8899999999********************* PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.053   3.7e+02      37      52 ..      75      90 ..      70      99 .. 0.68
   2 ?    2.0   0.1     0.022   1.5e+02      27      40 ..     151     164 ..     136     172 .. 0.85
   3 !   12.3   0.2   1.4e-05     0.094      27      53 ..     176     202 ..     176     203 .. 0.93
   4 !   10.0   0.5   7.4e-05       0.5      28      53 ..     210     233 ..     209     235 .. 0.87
   5 !    8.7   0.6   0.00018       1.3      27      53 ..     241     268 ..     241     269 .. 0.86
   6 !   12.6   1.0   1.1e-05     0.077      27      54 .]     275     301 ..     273     301 .. 0.89
   7 !   11.9   1.7   1.8e-05      0.12      27      50 ..     307     330 ..     306     334 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.053
   PF07562.9 37 snetdettCkkCpeeq 52
                 + +++  C +C+ ++
  MMETSP1325-20131115|7544_1 75 HSLSNTHVCANCKADH 90
                4555666777777665 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.022
   PF07562.9  27 dCvpCpegeisnet 40 
                 +C  C  g++sn t
  MMETSP1325-20131115|7544_1 151 SCSICGIGKYSNYT 164
                 59999999999977 PP

  == domain 3    score: 12.3 bits;  conditional E-value: 1.4e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C+ Cp+g +s+  ++  C +C+e++ 
  MMETSP1325-20131115|7544_1 176 KCTLCPAGRFSKDPGAGACPMCEEGKL 202
                 6**********************9986 PP

  == domain 4    score: 10.0 bits;  conditional E-value: 7.4e-05
   PF07562.9  28 CvpCpegeisnetdettCkkCpeeqw 53 
                 C +Cp+g+++   ++ +C+ Cp++++
  MMETSP1325-20131115|7544_1 210 CGECPAGTFVY--KKKSCEVCPSGTY 233
                 99*********..5588*****9865 PP

  == domain 5    score: 8.7 bits;  conditional E-value: 0.00018
   PF07562.9  27 dCvpCpegeisnet.dettCkkCpeeqw 53 
                 +C++C++g +  ++ ++t C +C+ +++
  MMETSP1325-20131115|7544_1 241 KCLDCAAGFYTGTEqGATACSSCDGGTY 268
                 6*********99888999*****97766 PP

  == domain 6    score: 12.6 bits;  conditional E-value: 1.1e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqws 54 
                 +C++C++g++s  + + tC++C+++++s
  MMETSP1325-20131115|7544_1 275 SCLSCAAGTYSGGS-SSTCTACDTGKYS 301
                 5***********66.77******99876 PP

  == domain 7    score: 11.9 bits;  conditional E-value: 1.8e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCpe 50 
                 +C++C++g +++++ +t+C +C+ 
  MMETSP1325-20131115|7544_1 307 SCTSCTAGRYVQKSAATECYNCTW 330
                 5*********************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       667  (0.0487858); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.37s 00:00:01.26 Elapsed: 00:00:00.60
# Mc/sec: 1345.95
//
Query:       MMETSP1325-20131115|7551_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-25   89.5   0.0    1.7e-25   89.3   0.0    1.0  1  PF00067.17 Cytochrome P450
     0.0018   17.6   0.3     0.0026   17.1   0.2    1.2  1  PF07262.6  Protein of unknown function (DUF1436)
     0.0071   16.1   0.2      0.015   15.1   0.2    1.5  1  PF01109.12 Granulocyte-macrophage colony-stimulating factor


Domain annotation for each model (and alignments):
>> PF00067.17  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.3   0.0   3.7e-29   1.7e-25     260     393 ..       9     152 ..       3     155 .] 0.92

  Alignments for each domain:
  == domain 1    score: 89.3 bits;  conditional E-value: 3.7e-29
                 HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHC.CCTS--HHHHTTS-HHHHHHHHHHHHHS-SSSTEEEEE-SS-EECT..T.......EEE-TT-EEEEETTTHHT-TTTS.SSTTS--GGGGC-STT CS
  PF00067.17 260 deelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevl.gdkreptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvir..g.......ylipkGtevivnlyalhrdpevf.pnPeeFdpeRFldekg 393
                  +el+at+ ++ +a+ +  +s+++ aL++  + ++v++k++eE++ v+ + + e+  d  +++ y+ avi E++R+  ++   ++Re+ +d+ ++  g        ++++Gt+v ++++a+h +++v+ ++ eeF+peR+l e+ 
  MMETSP1325-20131115|7551_1   9 TNELVATAANFVVAAAESPASGMAHALALVCESKDVMAKMKEEVEMVMeKYNGEMNKDFCKDMVYTSAVIDEAFRIKAPAT-MVSREAIEDCDLPikGtgknaetIKVKAGTKVNLCIHAVHLNKDVWgDDCEEFKPERWLGENT 152
                 479*********************************************7777799999***********************.999*****77654335668898999************************************97 PP

>> PF07262.6  Protein of unknown function (DUF1436)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.2   5.8e-07    0.0026      75     114 ..      46      84 ..      36      94 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 5.8e-07
   PF07262.6  75 eeykewvkklmekygYkskkalfKnmksvsilllnniitI 114
                  + ke+v+++meky+   +k+ +K+m++ s  ++++   I
  MMETSP1325-20131115|7551_1  46 AKMKEEVEMVMEKYNGEMNKDFCKDMVYTSA-VIDEAFRI 84 
                 5789***********************9885.55666555 PP

>> PF01109.12  Granulocyte-macrophage colony-stimulating factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.2   3.3e-06     0.015      19      84 ..      31      95 ..      15     116 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3.3e-06
  PF01109.12 19 ikealsllnessdlaavlneevevvseefdlq..eptclqtrlklykqGlrGsltklkgaltllashy 84
                +  al l+ es+d+ a++ eeve+v+e+++ +  +  c      +y   +  +  ++k++ t++++  
  MMETSP1325-20131115|7551_1 31 MAHALALVCESKDVMAKMKEEVEMVMEKYNGEmnKDFCK---DMVYTSAVIDEAFRIKAPATMVSREA 95
                6789************************97541044453...34677777777777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       647  (0.047323); expected 273.4 (0.02)
Passed bias filter:                      520  (0.0380339); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 742.87
//
Query:       MMETSP1325-20131115|7553_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 573.04
//
Query:       MMETSP1325-20131115|7555_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   12.2   9.2       0.19   11.4   6.4    1.6  1  PF05887.6  Procyclic acidic repetitive protein (PARP)
       0.39   10.4   3.0        4.3    7.1   0.2    2.3  2  PF02627.15 Carboxymuconolactone decarboxylase family
        1.1    7.5  19.4        1.2    7.4  13.4    1.2  1  PF03344.10 Daxx Family
        1.4    8.6  18.5        1.8    8.2  12.8    1.1  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        1.6    6.4  22.7        1.6    6.3  15.7    1.1  1  PF04147.7  Nop14-like family
        8.4    6.1  26.9         13    5.4  18.7    1.4  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31


Domain annotation for each model (and alignments):
>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   6.4   8.5e-05      0.19      42      97 ..     111     166 ..      86     195 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8.5e-05
   PF05887.6  42 Gkgekgtkvgaddtngtdrddepeeeeetepeeegeeetepeeegeeetepeeeee 97 
                  kg  g++   +d +  dr+d+ eeeee++ +ee  ee   e+e++e+ + ++ee 
  MMETSP1325-20131115|7555_1 111 AKGSDGAHRRENDDKTEDREDDEEEEEEPNWDEEDSEEDWDEDESDEDFDFNNEEF 166
                 46667778888888999***************999999999999999888777664 PP

>> PF02627.15  Carboxymuconolactone decarboxylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.024        54      48      71 ..      34      57 ..      32      63 .. 0.88
   2 ?    7.1   0.2    0.0019       4.3      49      74 ..      90     115 ..      73     119 .. 0.74

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.024
                HHHHHTT--HHHHHHHHHHHHHCS CS
  PF02627.15 48 raalkaGvteeeiaealaqaaaya 71
                r+++k  ++++e+a+a a aa+++
  MMETSP1325-20131115|7555_1 34 RILRKIEKSADEVAAARASAAPAD 57
                78899999***********99986 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0019
                 HHHHTT--HHHHHHHHHHHHHCSSBH CS
  PF02627.15  49 aalkaGvteeeiaealaqaaayaggp 74 
                 +a+  G++++e++ea  +a  + g++
  MMETSP1325-20131115|7555_1  90 QAKAEGKSADEVREARENALMAKGSD 115
                 49*****************9998876 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4  13.4   0.00051       1.2     405     495 ..      76     168 ..      15     208 .. 0.55

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00051
  PF03344.10 405 krqerkrrgkesr.....skdkslassestesPllasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegd 495
                 kr e + +++ ++     +++++ +  e+ e+  l ++ s++ ++ e++++ ed e++  +++eee++ +ee+ ee+  ++e++ed +  +e+ ++
  MMETSP1325-20131115|7555_1  76 KRDEFRIQTTYAEvqakaEGKSADEVREARENA-LMAKGSDGAHRRENDDKTEDREDD--EEEEEEPNWDEEDSEEDWDEDESDEDFDFNNEEFDE 168
                 333333333322221111122222223333333.333334444444444433332222..222222222222222222333344444444444333 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  12.8   0.00078       1.8     197     306 ..      43     160 ..       8     168 .. 0.46

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00078
                 XXXXXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------- CS
   PF03153.8 197 kasvarrreaaas.....qeaeldellksqleqrikeleagklskalkqkkkqkksekkskie........iQvDGagddssdeseedeeadedeeekdkvieeDlddseDDvseedeedldd 306
                 + +va  r  aa+     q ++ d  l  q ++++k+ e + +++  + + k + ++ +++ e           DGa   ++d+++ed+e+de+e   +++ + D  dse+D  e++ ++++d
  MMETSP1325-20131115|7555_1  43 ADEVAAARASAAPadrpvQAKDDD--LSFQERAQAKRDEFRIQTTYAEVQAKAEGKSADEVREarenalmaKGSDGAHRRENDDKTEDREDDEEE---EEEPNWDEEDSEEDWDEDESDEDFD 160
                 333333333333333323222222..222222222222222222222222222222222211133455445778999888888655555555444...5667777777777765555555555 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  15.7   0.00072       1.6     312     388 ..      72     165 ..      22     203 .. 0.46

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00072
   PF04147.7 312 saddlddefe....................edddenfglgsaeeeeeeee............eegvededeeeddddeeeeeedvdedeeeedeedeesddeeeeeeee 388
                  a+ + def                      ++                e            + + +d+ e+ +dd+eeeee ++de+++eed +++esd++ + ++ee
  MMETSP1325-20131115|7555_1  72 RAQAKRDEFRiqttyaevqakaegksadevREAR---------------EnalmakgsdgahRRENDDKTEDREDDEEEEEEPNWDEEDSEEDWDEDESDEDFDFNNEE 165
                 2222222222333322111111111111112222...............122222222222211222222222222222233333333333333333333222222222 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  18.7    0.0057        13     137     219 ..      88     170 ..      57     175 .. 0.63

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0057
   PF11705.3 137 kllalskfkkkadlkkfaeedeeeklsalekkeke.ldaedeeeedkkeeeeeeeeeeedddfeDdddddedDYnaekYFDnGe 219
                 +++a+ + k+ +++++  e+   +k s+  +++++  + ed e+++++eee + +ee+ ++d+++d+ d++ D+n e+ FD+G 
  MMETSP1325-20131115|7555_1  88 EVQAKAEGKSADEVREARENALMAKGSDGAHRRENdDKTEDREDDEEEEEEPNWDEEDSEEDWDEDESDEDFDFNNEE-FDEGG 170
                 444555555555665555433334444444333330223333333334446777899999999888888888997766.77775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       823  (0.060196); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.43s 00:00:01.11 Elapsed: 00:00:00.63
# Mc/sec: 810.20
//
Query:       MMETSP1325-20131115|7556_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-05   21.9   0.6     0.0039   16.8   0.0    2.8  3  PF08240.7  Alcohol dehydrogenase GroES-like domain
     0.0014   18.1   0.1     0.0026   17.1   0.1    1.4  1  PF00107.21 Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> PF08240.7  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   5.7e-07    0.0039      35      64 ..       2      33 ..       1      38 [. 0.90
   2 ?    0.6   0.0     0.059   4.1e+02      94     109 .]      35      50 ..      34      50 .. 0.88
   3 ?    1.3   0.0     0.037   2.5e+02      27      50 ..      99     122 ..      86     134 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 5.7e-07
                ----BE-EEEEE----B-..-----EEEE--E CS
   PF08240.7 35 lGhEivGiveevgegvkk..lkvGdrvvvepl 64
                lG E++Gi+++v ++  +  lkvGdrv+++  
  MMETSP1325-20131115|7556_1  2 LGQEGAGIIDAVTPKAAEmgLKVGDRVAYNSF 33
                8***************9999*******99765 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.059
                 --BSEEEECGGGEEEE CS
   PF08240.7  94 gfaeyvvvpekklvkl 109
                 ++aey++vp+ k++++
  MMETSP1325-20131115|7556_1  35 SYAEYTAVPAAKILPV 50 
                 69********999875 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.037
                 TT--SSEE----BE-EEEEE---- CS
   PF08240.7  27 levklplilGhEivGiveevgegv 50 
                   +++  i G  ++G+v++  +++
  MMETSP1325-20131115|7556_1  99 WAAQMAKIQGYKVIGTVSKGKKSI 122
                 567788899999999999866555 PP

>> PF00107.21  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   3.9e-07    0.0026       3      40 ..      97     133 ..      95     139 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 3.9e-07
                 --HHHHHHHHH--EEEEEESSHHHHHHHHH----EEEE CS
  PF00107.21   3 GlaavqlAkalGarviavdsseeklelakelGadhvin 40 
                  ++a+q+Ak+ G +vi+++s+  k+ +a++ G+d+ i 
  MMETSP1325-20131115|7556_1  97 CQWAAQMAKIQGYKVIGTVSKG-KKSIAEATGCDELIV 133
                 589***************9887.9**********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 637.52
//
Query:       MMETSP1325-20131115|7557_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-06   25.8   0.0    5.7e-06   25.7   0.0    1.0  1  PF01459.17 Eukaryotic porin


Domain annotation for each model (and alignments):
>> PF01459.17  Eukaryotic porin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   4.2e-10   5.7e-06       2      82 ..       8      89 ..       7      98 .. 0.92

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 4.2e-10
  PF01459.17  2 PgtfedlgkeakdllskdyhfeglkldvttktplsvaFqvshskslgss....vtssytleakyvglkltlkgrtdnslslnarv 82
                P  fe+ ++ + +l++   +f+g+k d+t+  ++ ++F v h +++g+s     + +y+++a+  + ++  ++++d ++ ++ ++
  MMETSP1325-20131115|7557_1  8 PTQFEHWTNGVSALTNVP-TFGGVKTDMTK--GITPNFAVVHRVHMGGSpsgqTNDYYQFGAQVFDETMVAIAQIDKEGMVEGQF 89
                888999999999999999.***********..*****************88877889*********************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 508.61
//
Query:       MMETSP1325-20131115|7559_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.60
# Mc/sec: 199.70
//
Query:       MMETSP1325-20131115|7563_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|7564_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|7561_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-05   24.3   0.0    3.6e-05   23.2   0.0    1.7  1  PF00023.25 Ankyrin repeat
    0.00087   19.4   0.0     0.0014   18.7   0.0    1.3  1  PF12796.2  Ankyrin repeats (3 copies)
     0.0034   17.3   0.0     0.0089   16.0   0.0    1.7  1  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
       0.13   12.1   0.2       0.28   11.0   0.1    1.7  1  PF03127.9  GAT domain


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0     1e-08   3.6e-05       4      32 ..     205     238 ..     203     239 .. 0.94

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 1e-08
                 BHHHHHHHTT.....HHHHHHHHHHTTSSTTHBH CS
  PF00023.25   4 TPLHlAalrg.....nlevvklLlsqGAdlnaqd 32 
                 T LH+A+  g     ++e++k+Ll++GA+l + d
  MMETSP1325-20131115|7561_1 205 TLLHVAVTAGnrrgeRKEIIKFLLERGASLELAD 238
                 99***************************98776 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   4.2e-07    0.0014       4      54 ..     179     236 ..     177     240 .] 0.76

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 4.2e-07
   PF12796.2   4 AaengnlelvklLlekgadvdl..getpLhlAaeagnl.....eivklLleagadvna 54 
                 A++ ++  ++k+L   g+ v     +t Lh+A+ agn      ei+k+Lle+ga+++ 
  MMETSP1325-20131115|7561_1 179 AIQAEQKRAFKTLDTLGKRVADtpCSTLLHVAVTAGNRrgerkEIIKFLLERGASLEL 236
                 7888888888888888888884555669999998888555555999999999999865 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.6e-06    0.0089       4      28 ..     205     234 ..     204     236 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.6e-06
   PF13606.1   4 TpLhlAasngr.....ielveaLlengadi 28 
                 T+Lh+A+  g+     +e++++Lle+ga +
  MMETSP1325-20131115|7561_1 205 TLLHVAVTAGNrrgerKEIIKFLLERGASL 234
                 99****88764445559**********986 PP

>> PF03127.9  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   8.3e-05      0.28      37      62 ..     102     127 ..      72     158 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 8.3e-05
   PF03127.9  37 qsdaellqeLyercekmqprifrlis 62 
                 ++ ++l+ +L+ rce++qp+i rl +
  MMETSP1325-20131115|7561_1 102 VASEQLYVDLTARCERLQPQIERLKT 127
                 556699***************99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       555  (0.0405939); expected 273.4 (0.02)
Passed bias filter:                      486  (0.0355471); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 1150.25
//
Query:       MMETSP1325-20131115|7560_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-38  130.5   0.2      7e-38  130.3   0.1    1.0  1  PF00180.15 Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> PF00180.15  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.3   0.1   5.1e-42     7e-38     249     348 .]       2     103 ..       1     103 [. 0.98

  Alignments for each domain:
  == domain 1    score: 130.3 bits;  conditional E-value: 5.1e-42
                 HCTT-------EEEEE-SS----EEE-----GGG-----------HHHHHHHHHHH---HHHHHHHHHHHHHHHH---B--------..--B--HHHHHHHH CS
  PF00180.15 249 aaalvGslGllpSaslgakkvalfEpvHGsapdiagkdkaNpiavilSaammLrhslgleeeAdkiekavekvleegivTkDlagea..akevstsefgeav 348
                 a++lvGslG+lpSasl +++ ++fEp+HGsapdiagkd+aNp+a+ilSaammLr+ l   +eAd +e+avek l+++++T+D++ e   ++ ++++++geav
  MMETSP1325-20131115|7560_1   2 ASMLVGSLGMLPSASLPSEGPGVFEPCHGSAPDIAGKDMANPMAMILSAAMMLRYDLARPKEADVLEAAVEKCLDDNMRTADIYAEGkgHTLLGCKAMGEAV 103
                 8**********************************************************************************999888999*******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|7562_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-16   59.9   0.8    2.4e-16   59.7   0.5    1.0  1  PF04153.13 NOT2 / NOT3 / NOT5 family


Domain annotation for each model (and alignments):
>> PF04153.13  NOT2 / NOT3 / NOT5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   0.5   1.7e-20   2.4e-16      64     121 ..       2      59 ..       1      66 [. 0.94

  Alignments for each domain:
  == domain 1    score: 59.7 bits;  conditional E-value: 1.7e-20
  PF04153.13  64 mpgdlqqllAakeLkkrgWryhkklqtWftreeepkeitdeyergsYkyFdpekWkkr 121
                 mp+dl+q +Aa+eL+ r+Wryh +l++Wf r+++ + +  ++++ +Y yFd ++W+ r
  MMETSP1325-20131115|7562_1   2 MPKDLLQAYAAQELYHRDWRYHMDLKLWFRRATASDGVPAHQQQPTYFYFDINSWECR 59 
                 89*****************************99999999999*************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 379.06
//
Query:       MMETSP1325-20131115|7566_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 748.25
//
Query:       MMETSP1325-20131115|7567_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 382.50
//
Query:       MMETSP1325-20131115|7568_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.37s 00:00:00.63 Elapsed: 00:00:00.46
# Mc/sec: 192.75
//
Query:       MMETSP1325-20131115|7569_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-13   48.1   0.0    6.7e-13   48.0   0.0    1.0  1  PF01871.12 AMMECR1


Domain annotation for each model (and alignments):
>> PF01871.12  AMMECR1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   4.9e-17   6.7e-13     112     169 ..       1      66 [.       1      69 [. 0.91

  Alignments for each domain:
  == domain 1    score: 48.0 bits;  conditional E-value: 4.9e-17
                 ---EEEB.....--B-----THHHHHTT--HHHHHHHHHHH----...TTCCCSTTSEEEE--EEE CS
  PF01871.12 112 hGliiek.....geysgllLPqvaveqgwdkeefleelcrKAglp...kdawldekikvtrfeaqi 169
                 hG++i++     ++ys+++LP+va eqgwd+++++++l+rKAg +    ++ + + i+ tr+++++
  MMETSP1325-20131115|7569_1   1 HGILIKFsdakgKNYSATFLPEVASEQGWDQTKTVRSLVRKAGADprtFTDAQLRGISTTRYQSSK 66 
                 9*****9999966*******************************9777566778999******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 325.22
//
Query:       MMETSP1325-20131115|7571_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-24   85.1   0.6    2.8e-24   84.5   0.4    1.3  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.5   0.4     2e-28   2.8e-24       2      64 .]      21      82 ..      20      82 .. 0.99

  Alignments for each domain:
  == domain 1    score: 84.5 bits;  conditional E-value: 2e-28
                HHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26  2 yYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevLsdpekraeyd 64
                +Y++Lgvp+das+ eIkkaY+k a+k+HPD+n+dd+ ea++kf+ + eAy vLs ++ ra yd
  MMETSP1325-20131115|7571_1 21 HYDLLGVPTDASAGEIKKAYYKQARKCHPDRNPDDP-EAHQKFQALGEAYRVLSSDQLRAYYD 82
                8***********************************.9**********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 535.66
//
Query:       MMETSP1325-20131115|7572_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 354.85
//
Query:       MMETSP1325-20131115|7565_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|7573_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-11   41.5   2.0    7.3e-11   41.5   1.4    1.6  2  PF07885.11 Ion channel
      1e-06   28.1   1.3    1.2e-06   27.8   0.9    1.0  1  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF07885.11  Ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.32   2.2e+03      28      38 ..       8      18 ..       3      24 .. 0.66
   2 !   41.5   1.4   1.1e-14   7.3e-11      25      73 ..      52     100 ..      29     103 .] 0.86

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.32
  PF07885.11 28 alYfsfvtltT 38
                a +++++ +t 
  MMETSP1325-20131115|7573_1  8 ACFWCLIPMTS 18
                55666666665 PP

  == domain 2    score: 41.5 bits;  conditional E-value: 1.1e-14
  PF07885.11  25 fldalYfsfvtltTiGYGdivPgtdagrlfaivyillGlalfalllavl 73 
                 ++ +lY+s++tlt +GYGdi P+++a  + +i+++l+  +++a++l +l
  MMETSP1325-20131115|7573_1  52 YVASLYYSVMTLTSVGYGDIQPQNEAEYIACIFLMLVSGIVWAYILGTL 100
                 6789*******************99966666******999999999876 PP

>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.9   1.7e-10   1.2e-06     105     197 ..       2      98 ..       1     100 [. 0.91

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 1.7e-10
                 XXXXXX-----S-SSSS-----TTT..........-S--------HHHHH-XXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXX.XXXXXXXX CS
  PF00520.26 105 fvlfifaiigvqlfggklrkkcvke..........kagenpnngntnfdtfgeafltlfrlmtgegwgdlmyatlragskigyiyfvifiilgsflllnllia 197
                 + ++++a++++++ + + +++++++           + +++++ +tn++ ++ +++ ++ ++t++g+gd+ ++     +  +yi   if +l+s ++ +++++
  MMETSP1325-20131115|7573_1   2 ITCHWMACFWCLIPMTSVDDDDFDDdgikmtwitaLEASKGIDLRTNYQIYVASLYYSVMTLTSVGYGDIQPQ-----NEAEYIAC-IFLMLVSGIVWAYILG 98 
                 67899************99999888**********9*************************************.....99999998.7777777788888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       570  (0.041691); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.61
# Mc/sec: 404.63
//
Query:       MMETSP1325-20131115|7574_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.32s 00:00:00.64 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|7570_1  [L=374]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-05   24.5   0.2    7.4e-05   22.7   0.0    2.1  2  PF13857.1  Ankyrin repeats (many copies)
    3.7e-05   23.8   1.0    7.9e-05   22.7   0.7    1.7  1  PF12796.2  Ankyrin repeats (3 copies)
    7.7e-05   22.1   0.2    0.00022   20.7   0.1    1.8  1  PF00023.25 Ankyrin repeat
     0.0047   16.9   0.0      0.016   15.2   0.0    2.0  1  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.071   12.7   0.0       0.15   11.6   0.0    1.5  1  PF02773.11 S-adenosylmethionine synthetase, C-terminal domain
       0.23    8.6  46.1       0.31    8.1  31.9    1.1  1  PF12128.3  Protein of unknown function (DUF3584)
        3.3    5.7  46.9         49    1.8  32.5    2.0  1  PF05262.6  Borrelia P83/100 protein


Domain annotation for each model (and alignments):
>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.8   5.5e+03      28      46 ..      18      33 ..      14      36 .. 0.70
   2 !   22.7   0.0   3.8e-08   7.4e-05       7      40 ..     340     373 ..     336     374 .] 0.90

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 2.8
   PF13857.1 28 alevvrlLlapgadlnlrd 46
                + +vv+ Ll   ad+++++
  MMETSP1325-20131115|7570_1 18 DNPVVERLL---ADAKHQT 33
                668999999...6666555 PP

  == domain 2    score: 22.7 bits;  conditional E-value: 3.8e-08
   PF13857.1   7 advnatdeggntpLhlAakggalevvrlLlapga 40 
                  d+ a d+ g+t+L++Aa+ g+l++++ L+++ga
  MMETSP1325-20131115|7570_1 340 GDLEAKDRLGQTALMQAAHDGHLSCLEVLVEKGA 373
                 688899***********************97776 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.7   4.1e-08   7.9e-05      47      83 ..     318     373 ..     248     374 .] 0.78

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 4.1e-08
   PF12796.2  47 e...................agadvnakdkegntpLhlAvrnghlelvklLlekga 83 
                 +                   +g d++akd  g+t+L+ A+  ghl ++++L+ekga
  MMETSP1325-20131115|7570_1 318 DkaraelgsdgwdqhilkaiNGGDLEAKDRLGQTALMQAAHDGHLSCLEVLVEKGA 373
                 35555555555555555566899*******************************98 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   1.1e-07   0.00022       2      26 ..     349     373 ..     348     374 .] 0.97

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.1e-07
                 SCBHHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGA 26 
                 G+T+L+ Aa+ g+l++++ L+++GA
  MMETSP1325-20131115|7570_1 349 GQTALMQAAHDGHLSCLEVLVEKGA 373
                 9***********************9 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   8.3e-06     0.016       2      26 ..     349     373 ..     348     374 .] 0.96

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 8.3e-06
   PF13606.1   2 GnTpLhlAasngrielveaLlenga 26 
                 G+T+L+ Aa+ g+++ +e L+e+ga
  MMETSP1325-20131115|7570_1 349 GQTALMQAAHDGHLSCLEVLVEKGA 373
                 9**********************97 PP

>> PF02773.11  S-adenosylmethionine synthetase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.5e-05      0.15      46     125 ..      55     133 ..      41     143 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.5e-05
                 HHHHHHHHHH-----SEEEEEEE------S-SEEEEE-----SS-HHHHHHHHHHH-------HHHHHTTTSS-GGGGS- CS
  PF02773.11  46 aaryvakslvaaglakrclvqlsyaigvaeplsilvetygtskkseeelveivrenfdlrpgvivkeldlkkpiykktaa 125
                  a++va +l   gla ++  ++  a  +ae l ++v+    +k+  ++l++ v++  d +  ++v++ld+ + i + t +
  MMETSP1325-20131115|7570_1  55 HAQQVADELEGIGLALSAVPKIQDAGELAETLRMHVSMAREEKERTDKLIQQVQSMADEK-EALVRQLDVMQEIQQATQR 133
                 578999999999*****999**************************************77.5799*********999875 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  31.9   0.00016      0.31     291     526 ..      84     312 ..      39     329 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00016
   PF12128.3 291 kelkeqlrtledelkeasdelnqelsaanakleakeselealeeqkkkfedkdieklkadldqlpsirseleeveaeldaltekvqdvqekferrkqkikeqleeeleknker.leaireekerqkaaieealealesqlrkqleaqkeelneeekelesrleelklrldsatateeeleqleaadealekaqeelekaeaevealqseeeqlrkkrdealealqkaerrleelrea 526
                 + l+ ++++ + e ke+ d+l q+++   ++ ea  ++l+ ++e +++  + d++k++ ++++l ++ +e +e+    +   e+ + +q+k+e+   k ke le++++++k++ ++++ e++e+q+a+ ++  eal  +l+ +l ++ ee ++ ++++e++  ++++++++a+a +++   ++  ++++ + +++++ka+++  +  +++++l +  + a+ a  ++++r+ e+++ 
  MMETSP1325-20131115|7570_1  84 ETLRMHVSMAR-EEKERTDKLIQQVQSMADEKEALVRQLDVMQEIQQA-TQRDVDKMREEQENLAKVYQEKQEAA--KAQYNEEKERLQSKLEEASEKEKEVLEKQMQDIKKEmEAKVAEAEEKQRAEVQQ-NEALIGKLEGRLREKAEEEKKVREQMEEAGRKEETARAKAEAANDLR--QAMGQRNITALEQAITKATQHGVDTAKARTRLAELVEAAEAAE-RENKRAAESKQP 312
                 44444444443.446777777777777777778888888888776555.67888888888888888777655443..344556777788888888888888888888888888666777777776666544.35555666655555555555555555555555555555555555543..3444666777777777777777777777777766666554443.344444444443 PP

>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8  32.5     0.025        49     166     361 ..       5     312 ..       2     326 .. 0.60

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.025
   PF05262.6 166 sgavsdvDidslsdkkvveklredkekdvelrrdivDl................................................................................................keresqedakraqvlkeeldkkqkdadkakkkadtaednadkqrkevreklqeaknlpepadvsskkedkkv...................aeekkreiekaqkeikkkdeeakkakdakaedlkkeskaeek.eaedkeleakkereevaeDlqkikeevkakktseaed..aidssnP 361
                 ++++ ++D  +  d+ vve+l+ d +++ +++  i+ l                                                                                                k re qe+  +  + k+e+ k+q +  + k++++ + ++a  + kev ek+ ++ + + +a+v +++e+++                    aee+k+  e+  +e+ + +ee  +ak ++a+dl++   +++    e+  + a ++  + a+   ++ e v+a + +e e+  a +s +P
  MMETSP1325-20131115|7570_1   5 AESLGQMDRLACIDNPVVERLLADAKHQTNFA--ITKLertgvrhvlvasfdhaqqvadelegiglalsavpkiqdagelaetlrmhvsmareekertdkliqqvqsmadekealvrqldvmqeiqqatqrdvdKMREEQENLAKVYQEKQEAAKAQYN--EEKERLQSKLEEASEKEKEVLEKQMQDIKKEMEAKVAEAEEKQRAevqqnealigklegrlrekAEEEKKVREQ-MEEAGR-KEETARAKAEAANDLRQAMGQRNItALEQAITKATQHGVDTAKARTRLAELVEAAEAAERENkrAAESKQP 312
                 56677889999999*************99998..666677999**********************************************9887755555555555555555555555555555555555555555555555555555555555554443..33344444444444444555555555445555555555555555444444444444444443333444444443.233333.33333444444555555532222213344444455555555555555555555555544444335566555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3411  (0.249488); expected 273.4 (0.02)
Passed bias filter:                      612  (0.044763); expected 273.4 (0.02)
Passed Vit filter:                       192  (0.0140433); expected 13.7 (0.001)
Passed Fwd filter:                        68  (0.00497367); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 2.29u 0.43s 00:00:02.72 Elapsed: 00:00:01.12
# Mc/sec: 793.13
//
Query:       MMETSP1325-20131115|7578_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.43s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|7575_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 365.99
//
Query:       MMETSP1325-20131115|7577_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-08   34.1   0.2    8.9e-08   31.6   0.1    1.9  1  PF00481.16 Protein phosphatase 2C
     0.0001   21.9   0.0    0.00014   21.5   0.0    1.2  1  PF07228.7  Stage II sporulation protein E (SpoIIE)
  ------ inclusion threshold ------
      0.089   12.2   0.0       0.15   11.5   0.0    1.4  1  PF09436.5  Domain of unknown function (DUF2016)


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.1   1.9e-11   8.9e-08     139     252 ..       2     130 ..       1     135 [. 0.81

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 1.9e-11
                 --STTSHHHHHHHHH----EE-T--EE---............................BSBSB----HHHC---ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHHHHHHHHHHHHHHHTHHHHHTS-SSHHHHHHH CS
  PF00481.16 139 dHkpsnedEreRIeeaggsvsngngRvngs............................LavsRalGdfelkpkekeqlvsaePdvtsvkideedefliLasDGlwdvlsdqeavdlvrselskkkspmeaaeelvdeaiarg 252
                 dH++++ dE eRIe++  s        ng+                              ++R++Gd +  p     + +++ +v   +   +   l+LasDGlwdv+++  ++  vr+  +    p +aa++l   +++r 
  MMETSP1325-20131115|7577_1   2 DHRIERADELERIEKLTKSDL----LPNGTpasyitrrqnsrgeygpkavfsgvtgisHLMTRSIGDPHGAP-----ALIPDAEVMLKEDLANGTRLVLASDGLWDVYDEAGVARAVRNISE----PARAARKLTLGSVSRR 130
                 899999999999999865533....233333333455555689999999999999999779**********9.....9********8888888889************99999999998866....9*****9987766665 PP

>> PF07228.7  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0     3e-08   0.00014     118     191 ..      80     146 ..      54     148 .. 0.72

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 3e-08
                 EE------EEEEE-----S--HHHHHH....HHHHHT----------HHHHHHHHHHH..HCT----S-EEEEEEE CS
   PF07228.7 118 elqlepgdllllyTDGvtEardpdgelfgkerllallaeaegesleelldalveelle..lgsgeleDDitllvlr 191
                 + +l++g +l+l++DG+ +  d++g      r+ + ++  e   +++ +++l+   ++  ++ g  eDD+t++v++
  MMETSP1325-20131115|7577_1  80 KEDLANGTRLVLASDGLWDVYDEAGVA----RAVRNIS--E---PARAARKLTLGSVSrrRQHGMSEDDVTVVVVD 146
                 46899**************99777766....7776666..3...4455555444444446556699********97 PP

>> PF09436.5  Domain of unknown function (DUF2016)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.4e-05      0.15      20      43 ..      79     102 ..      68     129 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.4e-05
   PF09436.5  20 lepleknGeRllvaanGlflevrr 43 
                 l++   nG+Rl++a++Gl+   + 
  MMETSP1325-20131115|7577_1  79 LKEDLANGTRLVLASDGLWDVYDE 102
                 444445*************76555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.55
# Mc/sec: 1036.97
//
Query:       MMETSP1325-20131115|7580_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|7581_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-19   69.4   0.0    4.1e-16   58.8   0.0    2.4  2  PF01067.17 Calpain large subunit, domain III
    0.00016   21.2   0.1    0.00037   20.0   0.1    1.6  1  PF12655.2  Domain of unknown function (DUF3787)


Domain annotation for each model (and alignments):
>> PF01067.17  Calpain large subunit, domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0002       1.4     115     144 ..      72     101 ..      34     104 .. 0.87
   2 !   58.8   0.0   5.9e-20   4.1e-16       3     146 ..     110     254 ..     108     255 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0002
  PF01067.17 115 ppgeYvivPstfepneegdFlLrvfsekpi 144
                 +p+  +++P+ +e +++g+F+L v s+ p+
  MMETSP1325-20131115|7581_1  72 APHGLLLIPTLSEIGAKGQFVLEVHSDYPV 101
                 5677799*******************9886 PP

  == domain 2    score: 58.8 bits;  conditional E-value: 5.9e-20
  PF01067.17   3 kesvfegsWrrgstaGGcrnfeetfltNPqfrlslkepddedekctvliaLmq....knrrkkrkkgeenltigfavykvkkkekeldkeffkknksiarsstfinsrevver..frLppge...YvivPstfepneegdFlLrvfsekpitl 146
                 k+++  g+W ++s+aGG++ ++ t+ +NP ++l+l  ++ +    +v i+L +     n+++++ k +    igf++++   +  + d   + ++ +  + + f+  + v++   f L+p e   Y i+P tfe +++g F+L+v ++++++l
  MMETSP1325-20131115|7581_1 110 KSRTLAGEW-TESSAGGSHMHQ-TWKKNPLYHLRLLGNKRS----KVKISLSRpsgnANWKAQTSKDSVGSMIGFYLVQG--PAPTRDAAEVYYDGKPWSETPFVPMNAVSTPnnFVLEPLEdevYSIIPATFEAGKKGPFFLSVVADCDFSL 254
                 678999***.9**********9.****************76....899***997766677777777666677*******8..6667777777777666667788888887764348888877778***********************99987 PP

>> PF12655.2  Domain of unknown function (DUF3787)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   5.5e-08   0.00037      24      49 ..      26      51 ..      25      53 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 5.5e-08
   PF12655.2 24 eklkpesnVsiPseeeVenAKeWVDn 49
                +++++ s+V +P+ ++V++AKeW  +
  MMETSP1325-20131115|7581_1 26 QQNQEASEVEMPDRKMVIEAKEWYQT 51
                6899*******************665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 1371.53
//
Query:       MMETSP1325-20131115|7582_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-22   78.5   0.8    3.6e-22   77.7   0.5    1.4  1  PF00226.26 DnaJ domain
  ------ inclusion threshold ------
        5.3    5.4   8.9        6.8    5.0   6.2    1.1  1  PF05091.7  Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
        6.4    6.1   7.0        9.4    5.5   3.4    2.2  3  PF14460.1  Prokaryotic E2 family D


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.7   0.5   7.8e-26   3.6e-22       2      64 .]      58     120 ..      57     120 .. 0.97

  Alignments for each domain:
  == domain 1    score: 77.7 bits;  conditional E-value: 7.8e-26
                 HHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26   2 yYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevLsdpekraeyd 64 
                 +Ye+Lgv+k+a+++ Ik aYrk+a++ HPDkn + e+eae  f+e+ eAye+Lsd+ +r++ d
  MMETSP1325-20131115|7582_1  58 PYEVLGVKKTADQKAIKAAYRKKAKESHPDKNIGREKEAEVEFREVVEAYEILSDDAQRRRWD 120
                 8**********************************************************9876 PP

>> PF05091.7  Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   6.2    0.0015       6.8      59     148 ..      80     179 ..      61     193 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0015
   PF05091.7  59 eagksssvfayv..aaedessFqlVd........kaketklekkkrrgkqrtaqarnqkaqeee..geetskkakrgaqrkqkrlqkkrgkrlgarargqrl 148
                 +a+ +s+  +++  ++e e +F+ V          a++++  ++  rg  rt ++++q++++++  +e++++++++++qr++ r+q+  + rl +++r++++
  MMETSP1325-20131115|7582_1  80 KAK-ESHPDKNIgrEKEAEVEFREVVeayeilsdDAQRRRWDQTGGRGFGRTHHTHHQNQRHQSswDEFFEQQRRHHDQRHH-RRQRRPQDRLSHAQRRSQE 179
                 222.222222223467778888766558888888667777788888998999999998888887877888888777777765.5566577777777775443 PP

>> PF14460.1  Prokaryotic E2 family D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.24   1.1e+03     118     149 ..      66      98 ..      63     123 .. 0.62
   2 ?    5.5   3.4    0.0021       9.4     108     152 ..     127     168 ..     119     180 .. 0.80
   3 ?   -1.6   0.0      0.31   1.4e+03      92     107 ..     226     241 ..     211     246 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.24
   PF14460.1 118 alksiqswealFfssa.ftHpngnekdeevkgk 149
                 + +++++++a++ + a  +Hp++n  +e+ +++
  MMETSP1325-20131115|7582_1  66 KTADQKAIKAAYRKKAkESHPDKNIGREKEAEV 98 
                 556677777777555436888877666554433 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0021
   PF14460.1 108 tGsaslpevsalksiqswealFfssaftHpngnekdeevkgkeaa 152
                 +G+ + ++ +++ +++sw+++F +++  H++ + ++++    + +
  MMETSP1325-20131115|7582_1 127 FGRTHHTHHQNQRHQSSWDEFFEQQRRHHDQRHHRRQRR---PQD 168
                 7999999*************9999999999988877553...444 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.31
   PF14460.1  92 LyqaPyfNVwesgeiC 107
                 ++ +P+ +  +++ i 
  MMETSP1325-20131115|7582_1 226 VFPFPFAHMSDDHGIW 241
                 7889999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       945  (0.0691194); expected 273.4 (0.02)
Passed bias filter:                      449  (0.0328408); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.69
# Mc/sec: 875.19
//
Query:       MMETSP1325-20131115|7584_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          2    8.3   5.0        2.2    8.2   3.5    1.1  1  PF10694.4 Protein of unknown function (DUF2500)


Domain annotation for each model (and alignments):
>> PF10694.4  Protein of unknown function (DUF2500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.5   0.00016       2.2      22      60 ..       4      42 ..       1      53 [. 0.83

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00016
                XXXXXXXXXX---EEE-EEEEEEE------GGG--SS-- CS
   PF10694.4 22 kikkeaknenapvlsveakvvdKreelitnrrsrereev 60
                +++k++ + +ap+  v++k  +K  + ++++ +r ++++
  MMETSP1325-20131115|7584_1  4 STRKNMAKAKAPEAAVKVKAEEKEATKSKEKGQRRSKSN 42
                68999999***************9999999888885552 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1365  (0.0998391); expected 273.4 (0.02)
Passed bias filter:                      849  (0.0620977); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.43s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 273.18
//
Query:       MMETSP1325-20131115|7586_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        99  (0.00724108); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 336.41
//
Query:       MMETSP1325-20131115|7585_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 261.42
//
Query:       MMETSP1325-20131115|7588_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-24   86.1   0.1    1.7e-24   85.4   0.0    1.4  1  PF04564.10 U-box domain
  ------ inclusion threshold ------
      0.036   13.5   0.0      0.068   12.6   0.0    1.4  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif


Domain annotation for each model (and alignments):
>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.4   0.0   2.5e-28   1.7e-24       1      70 [.      67     135 ..      67     138 .. 0.97

  Alignments for each domain:
  == domain 1    score: 85.4 bits;  conditional E-value: 2.5e-28
                 --GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHH CS
  PF04564.10   1 vPdefldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKekIdkflee 70 
                 vP+efld++ +++m+dPv lPsg++vDrsti +hll+ d+++Pftrepl+ e+l++   +K+k +++ e 
  MMETSP1325-20131115|7588_1  67 VPEEFLDELLYTIMTDPVRLPSGQVVDRSTILQHLLN-DEHNPFTREPLKAEDLVDADDIKAKMASWREG 135
                 8************************************.*****************************875 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     1e-05     0.068      10      43 ..      70     100 ..      62     112 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1e-05
                 X-B-TTT-S.-SS....EEEES---EEEHHHHHHH CS
   PF13445.1  10 ifaCpiske.qsteqnpPvvLpCGhvisrealekl 43 
                  f    +   +++    Pv+Lp G v++r ++ + 
  MMETSP1325-20131115|7588_1  70 EFLDELLYTiMTD----PVRLPSGQVVDRSTILQH 100
                 5666777788888....************998764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       534  (0.0390579); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.54
# Mc/sec: 723.34
//
Query:       MMETSP1325-20131115|7590_1  [L=547]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       477  (0.0348888); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.91u 0.36s 00:00:01.27 Elapsed: 00:00:00.52
# Mc/sec: 2520.78
//
Query:       MMETSP1325-20131115|7589_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-16   58.8   1.4    1.4e-12   46.6   0.0    2.1  2  PF01130.16 CD36 family
  ------ inclusion threshold ------
       0.32   10.4   7.1       0.67    9.4   4.9    1.5  1  PF01006.15 Hepatitis C virus non-structural protein NS4a


Domain annotation for each model (and alignments):
>> PF01130.16  CD36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.4   1.2e-05     0.084     159     279 ..      71     236 ..      54     243 .. 0.67
   2 !   46.6   0.0     2e-16   1.4e-12     287     466 ..     266     452 ..     258     453 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.2e-05
  PF01130.16 159 ekpfvtvtvkelLfdgyedpllslakktlkifkpelq...pspkfglfykrngtsdgvytvntGkkdieklgq.ieswngeselsl.....................................weteecn............kinGt.dGslfppflqkkdtlkvFssdlCRsln 279
                 + ++ t+t+++++f gy+d l +++ +    + ++ +   +++++  ++ + +     ++ +tGk+d++ +   + + ng++ +++                                     w++  c+            +++   +G  f+pf + +++ +++++++ R+l+
  MMETSP1325-20131115|7589_1  71 SGLITTHTIEDFIF-GYNDTLAKYVTT----MSYNGIigkQYESIEGMV-K-NKPAMPVSKYTGKDDTDLFNTwYSNANGSTAIQTrkdlgyvwsnlnskwepstcdsepwletnyglddcyiWQK--CEdgsddctdefevELKKVaNGLAFKPFFEMSENEELYAETFKRKLT 236
                 56789*********.******999999....444444356788888887.3.3347889999****999998834556777777777788888888888866666666666666666666665443..22233333345555444333666666666666666666666666665 PP

  == domain 2    score: 46.6 bits;  conditional E-value: 2e-16
  PF01130.16 287 tvegiktyrfvvpeevfdntkdnpenecfCkkkkkqsaclpkGlldlskCkdgaPiilSlPHFyqadpevleave........GlkPnkeehetfldiepttGtplqakkRlqinilvekskgi.silknlp..nvilPllwveesaklddelisqlkkqlvilprivailaivllalglillllaivlvi 466
                  ++gikt+r+ ++ ++f+n + n+  +   +k+++ s    + ++++ +     P++lS+P   +adp+v+ +v+        G++    + et++++ep tG++l+++  +q+n ++  +    + ++n++  +  lPl+w  ++ ++  + + +lk +l++ + ++  l i+l+++g+++ll++i +++
  MMETSP1325-20131115|7589_1 266 DIHGIKTIRYDMDASNFENSTANDVYYMG-PKHEDVSVWADNWMMPMDRI-KYYPAALSKPWLCDADPNVQSKVKvtrskdteGMECS--DVETYIAVEPMTGMTLEMQLMIQVNWQMSTTMLDgTLFTNVAssTRSLPLFWRGQKDSIAADDALTLKTELFDNVDLGIDLLIGLVVAGVVILLTVIGCLC 452
                 589****************9986655555.66666678899999999977.569*****************99872211111144433..346*************************9887644777776544789************************************************999876 PP

>> PF01006.15  Hepatitis C virus non-structural protein NS4a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   4.9   9.8e-05      0.67       4      35 ..     432     463 ..     429     483 .. 0.90

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 9.8e-05
  PF01006.15   4 vlvGlalAglAiyalttGSvvvvtrwsvnGkg 35 
                 +l+Gl+ Ag+ i+   +G+++v +     G+g
  MMETSP1325-20131115|7589_1 432 LLIGLVVAGVVILLTVIGCLCVGGGAAMGGGG 463
                 89********************9998888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.39s 00:00:01.25 Elapsed: 00:00:00.62
# Mc/sec: 1963.47
//
Query:       MMETSP1325-20131115|7593_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 254.61
//
Query:       MMETSP1325-20131115|7592_1  [L=536]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.8   9.9    0.00033   20.6   6.9    1.6  1  PF07974.8  EGF-like domain
  ------ inclusion threshold ------
      0.074   13.0   1.5       0.21   11.6   1.0    1.9  1  PF12661.2  Human growth factor-like EGF
       0.18   11.6   8.5       0.42   10.4   5.9    1.6  1  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   6.9   7.2e-08   0.00033       6      32 .]     502     528 ..     494     528 .. 0.92

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 7.2e-08
   PF07974.8   6 liCgghGtCvkqcgkCvCdsgyqGktC 32 
                 ++C+++G C+ ++g C+C++g+ G  C
  MMETSP1325-20131115|7592_1 502 NECSNRGNCDGDTGMCECHAGWEGQAC 528
                 57***********************99 PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.0   4.7e-05      0.21       1      13 []     516     528 ..     516     528 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.7e-05
   PF12661.2   1 kCqCppGyTGdnC 13 
                 +C+C +G++G+ C
  MMETSP1325-20131115|7592_1 516 MCECHAGWEGQAC 528
                 6*********999 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   5.9   9.2e-05      0.42       3      31 ..     504     528 ..     502     530 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 9.2e-05
                 STT-B-CC--B-S----BSBSTTEE---S CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenveGrkC 31 
                 C+++g    +Cd  tg C+C+ + eG+ C
  MMETSP1325-20131115|7592_1 504 CSNRG----NCDGDTGMCECHAGWEGQAC 528
                 66666....******************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.35s 00:00:01.20 Elapsed: 00:00:00.48
# Mc/sec: 2675.93
//
Query:       MMETSP1325-20131115|7591_1  [L=517]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       969  (0.0708748); expected 273.4 (0.02)
Passed bias filter:                      462  (0.0337917); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.91u 0.39s 00:00:01.30 Elapsed: 00:00:00.64
# Mc/sec: 1935.81
//
Query:       MMETSP1325-20131115|7594_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       847  (0.0619514); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 1330.83
//
Query:       MMETSP1325-20131115|7596_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.4   0.2      0.015   15.4   0.2    2.7  3  PF05178.7 KRI1-like family
       0.16   11.9   1.5       0.25   11.3   0.0    2.0  2  PF13348.1 Tyrosine phosphatase family C-terminal region
       0.42   11.1  13.7        5.9    7.4   0.1    3.1  3  PF11942.3 Spt5 transcription elongation factor, acidic N-terminal
        1.5    7.0  10.2        1.9    6.6   7.0    1.3  1  PF04632.7 Fusaric acid resistance protein family


Domain annotation for each model (and alignments):
>> PF05178.7  KRI1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.2   4.5e-06     0.015      10      47 ..      20      57 ..      15      84 .. 0.85
   2 ?    0.5   0.3       0.2     7e+02      11      57 ..     102     142 ..      92     150 .. 0.69
   3 ?   -2.3   2.1       1.5     5e+03       2      13 ..     157     168 ..     149     177 .. 0.45

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 4.5e-06
   PF05178.7 10 ekeeelkrlKnlkrkeieeklekikevaGlkekelsee 47
                 ++e  + lK+++ +e+ee lekik+  G ++ +++  
  MMETSP1325-20131115|7596_1 20 SRKERARDLKQTRQEELEETLEKIKHRHGSADGTVDVA 57
                68899999*********************766555544 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.2
   PF05178.7  11 keeelkrlKnlkrkeieeklekikevaGlkekelseedlekvldedF 57 
                 +++ ++r K   r + + ++ ++++ +   e+el+ee++    d+ F
  MMETSP1325-20131115|7596_1 102 RRRRRSRDKDGSRAKSRGRIGRLSRDVT--EEELEEEEV----DDRF 142
                 5555666666666666677777776666..567777777....6666 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 1.5
   PF05178.7   2 erkeeekeekee 13 
                 +rk+ +k++ ++
  MMETSP1325-20131115|7596_1 157 KRKRRAKARAKA 168
                 222222222222 PP

>> PF13348.1  Tyrosine phosphatase family C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.4e-05      0.25      10      47 ..      17      52 ..       9      52 .. 0.77
   2 ?   -2.8   0.2       1.9   6.4e+03       7      13 ..     162     168 ..     152     176 .. 0.44

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 7.4e-05
   PF13348.1 10 aaaseadrealrpllsvreeyleaaldtideryGsveg 47
                +a+s+++  ++r+l   r+e le +l+ i+ r+Gs++g
  MMETSP1325-20131115|7596_1 17 GADSRKE--RARDLKQTRQEELEETLEKIKHRHGSADG 52
                3344444..458899999999**************997 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 1.9
   PF13348.1   7 akaaaas 13 
                 aka+a+ 
  MMETSP1325-20131115|7596_1 162 AKARAKA 168
                 2222222 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0017       5.9      45      73 ..      22      51 ..      13      70 .. 0.69
   2 ?    2.1   0.1     0.077   2.6e+02      30      51 ..      94     117 ..      79     121 .. 0.67
   3 ?    6.9   3.2    0.0026       8.9      12      60 ..     130     172 ..     125     178 .. 0.36

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0017
   PF11942.3 45 drrrekeeeedaeelaevl.klekrYgdet 73
                ++r+++ +++++eel+e+l k++ r+g ++
  MMETSP1325-20131115|7596_1 22 KERARDLKQTRQEELEETLeKIKHRHGSAD 51
                334444444467888888888888886544 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.077
   PF11942.3  30 efieea..eddrrhreldrrreke 51 
                 +  ++a  +++rr r++d+ r k+
  MMETSP1325-20131115|7596_1  94 NSGDAAqpRRRRRSRDKDGSRAKS 117
                 444444557778888888877766 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0026
   PF11942.3  12 eeEeeeeedeeeelseeaefieeaeddrrhreldrrrekeeeedaeela 60 
                 eeE eeee +++  s   ++ e+   ++r r+ +r+r+ +++ +a++++
  MMETSP1325-20131115|7596_1 130 EEELEEEE-VDDRFS---KVPEPS-WSKRNRR-KRKRRAKARAKAQAQR 172
                 34444333.223222...245554.2222222.2222222222333333 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   7.0   0.00056       1.9     224     325 ..       7     114 ..       2     177 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00056
   PF04632.7 224 rllallallsslarllaalraaaaatppelaalldelaaalaaeeleaavaaLrarlaalrpeaeadsdtaaallarlaellaeladalaalralqaaiaa........r 325
                 rll + +l++ ++ + ++ r+  + +++el+++l++++ ++  ++  ++va+L+ ++a+ +++a   +  +a+ + rl+ + ++l +  ++ +a q ++++        r
  MMETSP1325-20131115|7596_1   7 RLLLVAVLARGADSRKERARDLKQTRQEELEETLEKIKHRHGSADGTVDVAQLPPEVAEVHASAT--AELSAINANRLVKVGSQLYTHANSGDAAQPRRRRrsrdkdgsR 114
                 67777788899999999999999988888**********9999*********************9..8888888888888888888777777777766665455555440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1051  (0.0768724); expected 273.4 (0.02)
Passed bias filter:                      491  (0.0359128); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 824.90
//
Query:       MMETSP1325-20131115|7595_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-16   60.3   2.3    1.9e-16   60.0   1.6    1.0  1  PF00003.17 7 transmembrane sweet-taste receptor of 3 GCPR
  ------ inclusion threshold ------
      0.058   12.5   0.1        0.1   11.7   0.0    1.4  1  PF04955.7  HupE / UreJ protein
      0.074   12.5   0.0       0.15   11.5   0.0    1.5  1  PF01618.11 MotA/TolQ/ExbB proton channel family


Domain annotation for each model (and alignments):
>> PF00003.17  7 transmembrane sweet-taste receptor of 3 GCPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   1.6   4.1e-20   1.9e-16      76     236 ..       1     171 [.       1     172 [. 0.84

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 4.1e-20
  PF00003.17  76 vktvrivrifkakkakaprlkslpksqllivllltlvqviictvwlvldpp...epekdts.vekakiil....eCk.egsdlalilvlgydilLllicfvlAfkarklpenFneakyitfsmlvfciiwlafiplylstrgk..iqvavlafallasssvlLlcifiPKvy 236
                 +kt+ri+ ++ a+++ ++ +k++ +  l +v++ ++v+ +i+++w++ +p      +k+t+ ++ +++++    +C  eg++  ++ +++ +++    +++l++k+r++   F e k+i ++m++ + i l  ipl+++++++    +++  +++ ++ ++lL++if PK+y
  MMETSP1325-20131115|7595_1   1 AKTWRIMQVMGAGESLKR-MKVNLSDALKMVAAGLIVEGAILAMWTISAPLkwqRFTKRTQfYHGREFVVetygKCYsEGMTNYIVPLVILQFVAYGYGCILCYKTRNIDTRFSEHKWISLAMFNNIQIFLLAIPLMVMVADDpqPFFLIKLLVIFLNDFGLLAMIFGPKFY 171
                 69*********9999766.6776777777888888899*********99997764477888555555555222256548999999999999999999***************************************99999984444566679999***************9 PP

>> PF04955.7  HupE / UreJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.3e-05       0.1      62     159 ..       7     107 ..       3     124 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.3e-05
   PF04955.7  62 vaamlvGallglagvalpavEagIalSvlvlGllvalaarlplllalalvalfalfHGyAhgaelpga...asallylaGfvlatallhlaGiglglllar 159
                 + +m +G  l+ ++v+l  +  ++a+ ++v G+++a+ +    l    ++    ++HG  + +e+ g+   + ++ y++ +v+ +++    G++l   +++
  MMETSP1325-20131115|7595_1   7 MQVMGAGESLKRMKVNLSDALKMVAAGLIVEGAILAMWTISAPLKWQRFTKRTQFYHGREFVVETYGKcysEGMTNYIVPLVILQFVAYGYGCILCYKTRN 107
                 678999**************************99998887777778889999************9886221455558888888888777777776665554 PP

>> PF01618.11  MotA/TolQ/ExbB proton channel family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.2e-05      0.15      80     118 ..       6      44 ..       3      61 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.2e-05
  PF01618.11  80 afsalgqsgqaslavvaegiseALvaTalGLfv..Aipall 118
                  ++ +g++   sl+ +  ++s AL++ a+GL+v  Ai+a+ 
  MMETSP1325-20131115|7595_1   6 IMQVMGAG--ESLKRMKVNLSDALKMVAAGLIVegAILAMW 44 
                 55666544..46********************988888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 1162.49
//
Query:       MMETSP1325-20131115|7599_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.47
# Mc/sec: 295.72
//
Query:       MMETSP1325-20131115|7597_1  [L=417]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-59  200.3  18.9      3e-59  200.3  13.1    2.3  2  PF04515.7 Plasma-membrane choline transporter


Domain annotation for each model (and alignments):
>> PF04515.7  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.4   0.9    0.0035        48      88     125 ..      22      70 ..       1      77 [. 0.69
   2 !  200.3  13.1   2.2e-63     3e-59       3     333 ..      80     383 ..      72     384 .. 0.93

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.0035
   PF04515.7  88 e...........ssgvevkldkklilllvyllfgllWtsevikavsqvt 125
                 +           s ++ + ++++l+ +   ++ ++lWts  ++ v+ v+
  MMETSP1325-20131115|7597_1  22 SlvggvamllalSAVLATAWQQFLMQYGSAVISCMLWTSVLMSGVMCVV 70 
                 0455555555556667788999999999999999999999998887655 PP

  == domain 2    score: 200.3 bits;  conditional E-value: 2.2e-63
   PF04515.7   3 aiiltilalvlllliiflrkRirlaiallkeaskavskv.pslvlvpiltfvlllafivlwivvavalytsgepkeknsskstsegessgvevkldkklilllvyllfgllWtsevikavsqvtiagvvaswYfagkkrdvpkfpvlasfkraltyslGSiafGSLivaiiqliRilleylneklkeaenklvkfllcclkcclwclekfvkflNrnAYvmiaiyGksFctsAkdafellkrnglralvldkltdfvlflgkllvsaltgllaylllkktkpkedlnyyavpvilvfiiayliasvffsvyesavdtlfvcfaedpelernd 333
                 +i+++++++   ++  ++ +Ri++a   l++a+  v+++ p+l lv++  +++ +++i +w+v++++  +s   +                         l+++++l++++W   v+ +v++v++ag+vasw+f g++     +pv  + kralt+s+GSi++GSL+va++++  ++l+ l++++++++++++ +++cc++++++++e  +k++Nr+A+v +a+yG  F ++ +++ +l++r g  a+v+d+l++  l lg l+ +a++g++ y++++      + ++++ +++   +i+y++++v + +++sav t+fvcfa+dp+  +++
  MMETSP1325-20131115|7597_1  80 GILFILITVCAYFYSGAVKERIPFASSNLRTACIGVRHFsPQLPLVAAGALLAQCLWILIWAVAFLGFRASP--NA---------------------DNPLAYFLMLVSFYWGCLVVVNVVHVATAGAVASWWFDGDN---APNPVSGATKRALTTSFGSICLGSLVVAVLKATVVMLRGLRDQANKSGHDAAAMIICCTEWLIRIIEGWMKYFNRWAFVFVAVYGLEFKDAGQKTHTLFRRLGWTAIVNDDLIQNALALGCLVTGAFVGVVGYTYATGA--GLGSDNAFELALWGLVIGYFLTKVLMGLVDSAVATVFVCFAQDPQAFQQT 383
                 5667777777777778999*************9999964389999999999999999999999999999883..33.....................55789999*******************************98...899************************************************************************************************************************************8863..789999***************************************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       860  (0.0629023); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.80u 0.39s 00:00:01.19 Elapsed: 00:00:00.52
# Mc/sec: 1921.69
//
Query:       MMETSP1325-20131115|7601_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|7598_1  [L=512]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0067   15.7   0.2      0.024   13.9   0.1    1.9  1  PF09851.4  Short C-terminal domain


Domain annotation for each model (and alignments):
>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   1.8e-06     0.024       6      24 ..      68      86 ..      64      89 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.8e-06
   PF09851.4  6 ekLkeLyarGeIteEEFea 24
                +   eLy +G+I++ EF++
  MMETSP1325-20131115|7598_1 68 RAAEELYRKGLISQREFQE 86
                5678*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.85u 0.37s 00:00:01.22 Elapsed: 00:00:00.55
# Mc/sec: 2230.79
//
Query:       MMETSP1325-20131115|7602_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.2   1.5      0.089   11.9   1.1    1.1  1  PF03524.10 Conjugal transfer protein


Domain annotation for each model (and alignments):
>> PF03524.10  Conjugal transfer protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.1   6.5e-06     0.089      77     122 ..      46      93 ..      40      97 .] 0.59

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.5e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXX..........XXXXXXX--HHHH CS
  PF03524.10  77 tYsfeLrstekekmkkysvsfryPd..ekeakeaaakkaaaeeaaeaa 122
                 +Y++ L +++ +  ++  v  r P+  e+e+ e+++++++++e+++++
  MMETSP1325-20131115|7602_1  46 MYTMALSVEAFNRIQRMLVDLRFPAfpEEEEGEEEQEQEQEQEQQQQQ 93 
                 8*************9999999999964222222222222222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1238  (0.09055); expected 273.4 (0.02)
Passed bias filter:                      632  (0.0462259); expected 273.4 (0.02)
Passed Vit filter:                        80  (0.00585138); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 474.38
//
Query:       MMETSP1325-20131115|7604_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|7606_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 206.09
//
Query:       MMETSP1325-20131115|7607_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|7614_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   24.1   0.0    1.2e-05   24.1   0.0    1.0  1  PF00248.16 Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   8.6e-10   1.2e-05     158     212 ..       2      57 ..       1      92 [. 0.80

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 8.6e-10
  PF00248.16 158 vqveynll.neleeegllelcaekgvgiiaysplggGlltgkylseerkedkeprk 212
                 +q++ nll +++ +  ++   +e+gv++ ay pl++Glltgk +s    ++k+ r+
  MMETSP1325-20131115|7614_1   2 NQIHLNLLyRRQGSLATVAKGKELGVATLAYYPLAMGLLTGKLTSARLRNKKDLRS 57 
                 89******6666666666666668******************99887766665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 426.02
//
Query:       MMETSP1325-20131115|7612_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-55  185.9   0.0    7.5e-55  185.7   0.0    1.0  1  PF00069.20 Protein kinase domain
    1.9e-23   82.8   0.0    2.3e-23   82.5   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    0.00033   20.3   0.0    0.00058   19.5   0.0    1.3  1  PF01636.18 Phosphotransferase enzyme family
     0.0011   17.9   0.0     0.0016   17.4   0.0    1.2  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0068   15.8   0.0       0.01   15.2   0.0    1.2  1  PF01633.15 Choline/ethanolamine kinase
  ------ inclusion threshold ------
      0.057   12.0   0.0      0.079   11.6   0.0    1.1  1  PF05445.6  Poxvirus serine/threonine protein kinase
       0.09   12.0   0.0       0.14   11.4   0.0    1.2  1  PF01163.17 RIO1 family
       0.13   11.4   0.0       0.21   10.8   0.0    1.2  1  PF10707.4  PhoP regulatory network protein YrbL


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.7   0.0   4.4e-58   7.5e-55      58     260 .]       2     207 ..       1     207 [. 0.97

  Alignments for each domain:
  == domain 1    score: 185.7 bits;  conditional E-value: 4.4e-58
                 TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH.....HHCCB-HHHHHHHHHHHHHHHHHHHH.TCEE-S--SGGGEEEETT--E...EE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20  58 pnivkllevfeekdelylvleyveggdlfdllk.....kegklseeeikkialqilegleylHs.ngiiHrDLKpeNiLldkkgel...kiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 +n+v+l++v+e+ ++lylv+e++ gg+l+dl+      ++g +se e+  i+ qil+ le lH+ ++i+HrDLKpeNiLl++++++   +++DFGl++   +++e+l+t+vgt +Y APEv    ++y++k+D++s+Gvily ll+  +pf+ge   +++e+++k++++k  ++e+++ + s+e+ d+++kl++k p++R++a+++l hpwl
  MMETSP1325-20131115|7612_1   2 KNVVTLIDVYEDPQRLYLVTEMCAGGELYDLICtksesDKGAFSEPEAAIITHQILSTLENLHDeHSIVHRDLKPENILLSSSNDVsqlRLIDFGLSRF-FEEGERLRTRVGTVYYTAPEVWA--EKYDNKCDIFSAGVILYVLLCSYPPFDGE---TDNEILRKVMRGKFTFPEEEWGDISDEAHDFVRKLMCKYPRRRPSAKDALAHPWL 207
                 69******************************99999999***********************967***************99988889********97.99*******************99..9****************************...9*****************************************************6 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   0.0   1.4e-26   2.3e-23      61     254 ..       2     200 ..       1     204 [. 0.86

  Alignments for each domain:
  == domain 1    score: 82.5 bits;  conditional E-value: 1.4e-26
                 TTB--BEEEBESSSSEEEEEE---B--HHHHHHHT...GTTGSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEETTT...EEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---T...TSBHHHHHHHHHHT-SSGGGS--HHH CS
  PF07714.12  61 pnivkllgvctkeepllivteyvkgGdLlefLrkk...ekekltlkdllkfalqiakGmeyLeskk.lvHrdLaarNvLleeek...vvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpe...kcpeelyelmkqCweeepeeRptfke 254
                 +n+v+l+ v+ + ++l++vte+++gG+L++++ +k   +k +++  +   ++ qi + +e L++++ +vHrdL   N+Ll++++   + ++ DfGL+r  e+ ++    +++   v ++apE++  +k+  k D++s Gv+l+ +++ +  p+ g +++e+l+++ +gk     e   ++++e ++++++ + + p++Rp+ k+
  MMETSP1325-20131115|7612_1   2 KNVVTLIDVYEDPQRLYLVTEMCAGGELYDLICTKsesDKGAFSEPEAAIITHQILSTLENLHDEHsIVHRDLKPENILLSSSNdvsQLRLIDFGLSRFFEEGERL---RTRVGTVYYTAPEVWA-EKYDNKCDIFSAGVILYVLLC-SYPPFDGETDNEILRKVMRGKFTFPEEewgDISDEAHDFVRKLMCKYPRRRPSAKD 200
                 79******************************99877788999********************87659*************966344779**********555555...45567899*****886.58***************9999.669**************77776544441225789999***************9876 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.4e-07   0.00058     146     196 ..      50      99 ..      35     100 .. 0.74

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 3.4e-07
                 HHHHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEE..TTTTEE..EE---TT-B CS
  PF01636.18 146 eeleervlaalaallpgaeppvllHgDlhpgNllvd..pddgrv..gviDfedag 196
                 + +++++l +l+ l +   +++++H+Dl+p N+l+      ++    +iDf++++
  MMETSP1325-20131115|7612_1  50 AIITHQILSTLENLHD---EHSIVHRDLKPENILLSssN--DVSqlRLIDFGLSR 99 
                 5556666666666666...9****************643..433369****9875 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   9.3e-07    0.0016     114     168 ..      39      98 ..      11     110 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 9.3e-07
   PF06293.9 114 e....laeelkralleavGrliakmhrag.vnHtdlnahnilldeeeekakvwliDldka 168
                 +    ++e     + +++ ++ +++h+++ + H+dl + nill   ++  ++ liD+  +
  MMETSP1325-20131115|7612_1  39 SdkgaFSEPEAAIITHQILSTLENLHDEHsIVHRDLKPENILLSSSNDVSQLRLIDFGLS 98 
                 23456677777788999*********986479************************9655 PP

>> PF01633.15  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     6e-06      0.01     131     169 ..      55      95 ..      35     102 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 6e-06
                 HHHHHHTT----EEEE-S------EEE..-------EE--- CS
  PF01633.15 131 eleklleekespvvfCHnDlqegNill..nkeekklvlIDF 169
                 ++ + le+ + +  + H Dl ++Nill  +++ ++l+lIDF
  MMETSP1325-20131115|7612_1  55 QILSTLENLHDEHSIVHRDLKPENILLssSNDVSQLRLIDF 95 
                 456778899999999************55566789****** PP

>> PF05445.6  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.6e-05     0.079     293     316 ..      62      85 ..      51     106 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.6e-05
   PF05445.6 293 elkdctnFlHvDlkPdniLvFdsk 316
                 +l d++  +H DlkP+niL+  s+
  MMETSP1325-20131115|7612_1  62 NLHDEHSIVHRDLKPENILLSSSN 85 
                 678999*************98775 PP

>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0     8e-05      0.14     105     147 ..      48      94 ..      25      99 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8e-05
                 HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESS....SEEE-- CS
  PF01163.17 105 eaeelyeeileemrklykeaglvHaDLSeyNvlvded....kvviID 147
                 ea+ + ++il++++ l  e+ +vH DL   N+l+++     ++ +ID
  MMETSP1325-20131115|7612_1  48 EAAIITHQILSTLENLHDEHSIVHRDLKPENILLSSSndvsQLRLID 94 
                 6777899**************************98752122344555 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00012      0.21     134     170 ..      64      98 ..      45     105 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00012
   PF10707.4 134 llenrIvardlkpknivvgrrsegeeelvlvDGlGdk 170
                   e+ Iv rdlkp+ni+++  ++ + +l l+D +G +
  MMETSP1325-20131115|7612_1  64 HDEHSIVHRDLKPENILLSSSNDVS-QLRLID-FGLS 98 
                 34688**************999999.9***99.6655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.54
# Mc/sec: 1264.74
//
Query:       MMETSP1325-20131115|7615_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.8   0.0      0.023   14.6   0.0    1.0  1  PF09974.4 Uncharacterized protein conserved in archaea (DUF2209)


Domain annotation for each model (and alignments):
>> PF09974.4  Uncharacterized protein conserved in archaea (DUF2209)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.7e-06     0.023      49      86 ..       6      43 ..       2      49 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.7e-06
   PF09974.4 49 klrdivkeveetvdklddefeytivaekGelfnepewl 86
                ++ d+v+ +++ v +l+  f   i a+k e++ +pe+l
  MMETSP1325-20131115|7615_1  6 EVFDLVQDLKTKVAELETAFSTNIAADKTEVYVRPEDL 43
                689*********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 267.83
//
Query:       MMETSP1325-20131115|7616_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.3   4.5       0.12   12.2   3.1    1.1  1  PF13466.1 STAS domain
        1.6    8.0   5.5        1.8    7.9   3.8    1.0  1  PF10988.3 Protein of unknown function (DUF2807)


Domain annotation for each model (and alignments):
>> PF13466.1  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   3.1   1.8e-05      0.12      22      70 ..      10      56 ..       3      61 .] 0.74

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.8e-05
   PF13466.1 22 alaag.advvvDlsgvervDsaglalLlrlarrarargrrlrlrglppal 70
                a+ ag    +vD+sg + v +a++ ++++ a +a   g    ++g+  + 
  MMETSP1325-20131115|7616_1 10 AAGAGaGAATVDASGAGAVGAATVEAVVATAGAA---GAAAAIVGPAAEA 56
                333334599*********************9988...7677777766655 PP

>> PF10988.3  Protein of unknown function (DUF2807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.8   0.00026       1.8     116     161 ..       7      52 ..       2      60 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00026
                 --EEE---EEEEEEEEE----EEEEEEEEEEEEEEEE----EEEEE CS
   PF10988.3 116 gdiklsGtaeraelsvsgsGdieaedlkaeevevsvsgsgdievna 161
                 + + +   a+ a++++sg+G + a+ ++a  +++ ++g++ + v +
  MMETSP1325-20131115|7616_1   7 AAVAAGAGAGAATVDASGAGAVGAATVEAVVATAGAAGAAAAIVGP 52 
                 5555555689999****************************99984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       676  (0.0494441); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 243.63
//
Query:       MMETSP1325-20131115|7617_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.57
# Mc/sec: 384.24
//
Query:       MMETSP1325-20131115|7620_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 371.20
//
Query:       MMETSP1325-20131115|7621_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 588.20
//
Query:       MMETSP1325-20131115|7623_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 284.01
//
Query:       MMETSP1325-20131115|7622_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00092   18.4   1.2    0.00092   18.4   0.8    1.0  1  PF01151.13 GNS1/SUR4 family


Domain annotation for each model (and alignments):
>> PF01151.13  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.8   6.7e-08   0.00092     217     248 ..       6      37 ..       1      40 [. 0.83

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 6.7e-08
  PF01151.13 217 kaaialnllyllslllLFlnffvksylkkkkk 248
                  ++++ + +++ s+++LF++ff+++ + k ++
  MMETSP1325-20131115|7622_1   6 LSNLVAGAVMYGSYFALFFQFFYNRFIVKARA 37 
                 5688999*****************99877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 202.77
//
Query:       MMETSP1325-20131115|7619_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.7   0.0      0.042   14.1   0.0    1.4  1  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   3.1e-06     0.042       1      40 [.      25      64 ..      25      74 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.1e-06
  PF00428.14  1 eptaadikavlkaagveveaerlkllvkalegkdikelia 40
                e+ta++  a+++a g eve++++ l +  l+g   k++ a
  MMETSP1325-20131115|7619_1 25 EVTADQMAALISATGNEVEPYWPTLYAGYLKGDIAKKMTA 64
                69*****************************988877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 289.08
//
Query:       MMETSP1325-20131115|7629_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   12.2   0.7       0.07   12.0   0.5    1.2  1  PF06800.7 Sugar transport protein
       0.17   10.3   1.3        0.2   10.1   0.9    1.0  1  PF11992.3 Domain of unknown function (DUF3488)


Domain annotation for each model (and alignments):
>> PF06800.7  Sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.5     1e-05      0.07     198     226 ..      48      76 .]      12      76 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1e-05
   PF06800.7 198 niisGllwaignlflllsaqkvGvatafs 226
                   i+G++w++gn+f  +++  +G a+++s
  MMETSP1325-20131115|7629_1  48 GSIAGIVWSAGNFFSTCATILLGEAIGYS 76 
                 5799***********************97 PP

>> PF11992.3  Domain of unknown function (DUF3488)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.9     3e-05       0.2      31      82 ..      16      67 ..      10      70 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 3e-05
   PF11992.3 31 lalvallllwrvllllgrvalPprllllllallaalalaltagtlggldalv 82
                ++ +++ ++  ++l l+r++ P+  l+++l+ +++++++++ag+++   a++
  MMETSP1325-20131115|7629_1 16 IVTCSMWIIFVLALRLQRRPIPSLQLRVMLLPGSIAGIVWSAGNFFSTCATI 67
                5678888888889999***************************999876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.59
# Mc/sec: 308.68
//
Query:       MMETSP1325-20131115|7624_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-53  179.4   0.0    7.4e-53  179.2   0.0    1.0  1  PF00069.20 Protein kinase domain
      2e-24   85.9   0.0    2.5e-24   85.7   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
    0.00015   20.7   0.0    0.00025   20.0   0.0    1.2  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0021   17.7   0.0     0.0049   16.5   0.0    1.6  1  PF01636.18 Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.031   13.0   0.0      0.048   12.3   0.0    1.2  1  PF07387.6  Seadornavirus VP7
      0.035   13.5   0.3      0.054   12.9   0.2    1.3  1  PF01633.15 Choline/ethanolamine kinase
       0.12   12.3   0.0       0.23   11.4   0.0    1.4  1  PF02881.14 SRP54-type protein, helical bundle domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.2   0.0   3.8e-56   7.4e-53      69     260 .]       3     192 ..       1     192 [. 0.96

  Alignments for each domain:
  == domain 1    score: 179.2 bits;  conditional E-value: 3.8e-56
                 ESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHH..TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--.HHHHHTSGGH CS
  PF00069.20  69 ekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvll..kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRlt.aeeilkhpwl 260
                 +  ++++v+eyv gg+lf+ l k+ ++s +  k+++ +i+ +ley+H+ g ++rDLKpeNi+ld++g++k++DFG+++   + +e+++t+vgt+ Y++PE l      +yt+ vD+WslG+i+yel++gk+pf ++++e++++++ +++k+k +++++ +    +e+kdl+kkll+ d +kRl+  +ei +hpw+
  MMETSP1325-20131115|7624_1   3 DPHRIFFVMEYVAGGELFSRLCKKDSFSANVSKFYIAEIFMALEYIHDSGYCYRDLKPENIMLDEEGHCKVVDFGFCRS-CNADERMKTQVGTPAYLSPEQLDskFTGGYTRIVDWWSLGIITYELMSGKTPFCKNNSESSYAIYMRVQKGKFSFNKKFD----NEVKDLVKKLLTADVTKRLQsPAEIRQHPWF 192
                 567899************************************************************************8.89999****************77447789***********************************************9988....99*****************8689*******8 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.7   0.0   1.3e-27   2.5e-24      75     250 ..       6     180 ..       1     187 [. 0.86

  Alignments for each domain:
  == domain 1    score: 85.7 bits;  conditional E-value: 1.3e-27
                 SEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE...EEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH..HTT-BS---TTSBHHHHHHHHHHT-SSGGGS- CS
  PF07714.12  75 pllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk...ftsksDvWsfGvllwEiftlgespypglsneevlell..kegkrlekpekcpeelyelmkqCweeepeeRp 250
                 ++++v+eyv+gG+L + L kk  ++++ +    ++++i  ++ey+++  +  rdL   N++l+ee ++k+ DfG +r+ + d+++k   ++     +++pE l++k    +t   D Ws G++++E+++ g++p+ + ++e+ ++     ++ + + ++k  +e+++l+k+ ++++ ++R 
  MMETSP1325-20131115|7624_1   6 RIFFVMEYVAGGELFSRLCKK--DSFSANVSKFYIAEIFMALEYIHDSGYCYRDLKPENIMLDEEGHCKVVDFGFCRSCNADERMK---TQVGTPAYLSPEQLDSKFtggYTRIVDWWSLGIITYELMS-GKTPFCKNNSESSYAIYmrVQKGKFSFNKKFDNEVKDLVKKLLTADVTKRL 180
                 5899****************8..7777777778999*******************************************5555444...445566899***998887778*******************.99**99886666555442466778999*******************99996 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.3e-07   0.00025      94     175 ..       9      86 ..       4      91 .. 0.85

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 1.3e-07
   PF06293.9  94 llteklegaqdLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarrrlrak 175
                  ++e ++g +    +++k ++++ ++++  + ++  + + +h+ g +++dl + ni+ldee+   ++ ++D+  +r   + +
  MMETSP1325-20131115|7624_1   9 FVMEYVAGGELFSRLCKK-DSFSANVSKFYIAEIFMALEYIHDSGYCYRDLKPENIMLDEEG---HCKVVDFGFCRSCNADE 86 
                 678888887777777776.77999999999********************************...*******9998766555 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.5e-06    0.0049     167     196 ..      52      80 ..      40      81 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.5e-06
                 EEB-SS-SGGGEEEETTTTEEEE---TT-B CS
  PF01636.18 167 vllHgDlhpgNllvdpddgrvgviDfedag 196
                 + + +Dl+p N+++d ++g+  v+Df++++
  MMETSP1325-20131115|7624_1  52 GYCYRDLKPENIMLD-EEGHCKVVDFGFCR 80 
                 679************.555556*****986 PP

>> PF07387.6  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.5e-05     0.048     152     187 ..      43      76 ..      25      82 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.5e-05
   PF07387.6 152 kdLmdfhsestnllhGDcnpenlmcDknGylklvDP 187
                  +L+ +h  ++++ + D +pen+m D+ G  k+vD 
  MMETSP1325-20131115|7624_1  43 MALEYIH--DSGYCYRDLKPENIMLDEEGHCKVVDF 76 
                 5788999..7888899******************95 PP

>> PF01633.15  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   2.8e-05     0.054     142     173 ..      50      80 ..      18      85 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.8e-05
                 -EEEE-S------EEE-------EE---TT-E CS
  PF01633.15 142 pvvfCHnDlqegNillnkeekklvlIDFEYas 173
                 +   C  Dl ++Ni+l +ee+  +++DF ++ 
  MMETSP1325-20131115|7624_1  50 DSGYCYRDLKPENIML-DEEGHCKVVDFGFCR 80 
                 4568************.9**********9996 PP

>> PF02881.14  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00012      0.23      13      39 ..     150     176 ..     146     180 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00012
                 --..---------HHHHHHHHHHT--- CS
  PF02881.14  13 tgklfltekkidelleeleeaLleaDV 39 
                 ++++f++ kk d  +++l + Ll+aDV
  MMETSP1325-20131115|7624_1 150 QKGKFSFNKKFDNEVKDLVKKLLTADV 176
                 6679999*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      382  (0.0279403); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.55
# Mc/sec: 1067.47
//
Query:       MMETSP1325-20131115|7626_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-14   52.5   0.0      4e-14   52.2   0.0    1.1  1  PF00928.16 Adaptor complexes medium subunit family
    0.00069   18.7   0.0    0.00084   18.4   0.0    1.1  1  PF10291.4  Muniscin C-terminal mu homology domain


Domain annotation for each model (and alignments):
>> PF00928.16  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.0   5.9e-18     4e-14      48     232 ..       7     183 ..       1     207 [. 0.79

  Alignments for each domain:
  == domain 1    score: 52.2 bits;  conditional E-value: 5.9e-18
                 -----EEEE---SS-B------B-SEEEEETT-B-TTHHHH--EEE--.....---.-EEEEEEEB-S-..S--SEEEEEEEE.-----EEEEEEEEE-S-TT--BEEEEEEE------EEEEE--.STTEEEE---..-EEEEE--B--.......-EE---EEEE----------EEEEEEEET-------- CS
  PF00928.16  48 LsGmpevklsLndelniekkgielddvsfHpcVrlskfeservisFiP.....pdg.efeLmrYrvsee..sklplklecqvkeeskgrievnvklesqlkrklslenvkitiplPkevskpvlkv.sdGkakydseenvleWsikklpgekehalsgelelsaeqekeekdrekppvsveFsipgataSglkV 232
                 + +  ++k+++++         el + + Hp V+++ +e + ++++       p g  + ++r+ +s++  +++p++++c ++e  + + ++nv++e+++++  +l+nv i+ipl ++   p+++  + G+ ++ ++ + l+W+i+ +++      sg+le++ +q++++   +++p++++F  ++ +a g+ V
  MMETSP1325-20131115|7626_1   7 VDEACKCKVAIAGT------KNELFAFQTHPKVDKKAYEASGTLQLKDltkgfPKGkPVGVLRWSMSTQddDQVPISINC-WPE--EDGQDMNVNVEYNVNSVHELHNVCISIPLGTS-NVPQIISmDSGTHTHSRNAEELIWEIPLIDA---ANKSGTLEFNVQQKDSD---AFFPINISFGSQQLHA-GIDV 183
                 56677888888885......357889999***********888888772223355556678***9988888*********.555..466666666666677777***********955.56788887999999999999***********...55567777777777555...8************999.8876 PP

>> PF10291.4  Muniscin C-terminal mu homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.2e-07   0.00084      81     199 ..      43     157 ..      20     198 .. 0.73

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.2e-07
   PF10291.4  81 klnlsala....rsktevalkYqvhidpsdkascPlilkpvWkleehqaslildyklnpssassssitLenlvvvvnldgseatsaqskPqgt..fnkeksrvtWklpelsvtesgeegkLlaRf 199
                 +l+l+ l+    + k+ + l++++++++    ++P++++       + +++ ++y++n+         L+n+ ++++l +s++ ++ s  +gt  ++++ ++++W +p +     +++g+L   +
  MMETSP1325-20131115|7626_1  43 TLQLKDLTkgfpKGKPVGVLRWSMSTQDD--DQVPISINCWPEEDGQDMNVNVEYNVNS------VHELHNVCISIPLGTSNVPQIISMDSGThtHSRNAEELIWEIPLIDAA--NKSGTLEFNV 157
                 566667774444555555599***99755..8******864333444566666666666......778*********************9976116777889****9988888..4566665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1327.21
//
Query:       MMETSP1325-20131115|7630_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.5   0.0      0.017   14.8   0.0    1.4  1  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.3e-06     0.017       2      30 ..       8      36 ..       7      43 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.3e-06
                THHHHHHHHH----HHHHHHHHHHTTTSH CS
  PF00627.26  2 deeaiqqLreMGfsreeakkALratnnnv 30
                +eea + L+ MGf+ ++ ++ L ++ +++
  MMETSP1325-20131115|7630_1  8 YEEATEVLLRMGFEPDRIRRVLVSAHGDL 36
                7999999********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.62
# Mc/sec: 637.74
//
Query:       MMETSP1325-20131115|7631_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 265.31
//
Query:       MMETSP1325-20131115|7632_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-27   95.1   0.1    3.2e-27   95.1   0.0    1.0  1  PF13087.1  AAA domain
     0.0091   16.0   0.0      0.011   15.7   0.0    1.2  1  PF13538.1  Family description
  ------ inclusion threshold ------
      0.065   12.6   0.0      0.072   12.5   0.0    1.1  1  PF01443.13 Viral (Superfamily 1) RNA helicase


Domain annotation for each model (and alignments):
>> PF13087.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.1   0.0   6.9e-31   3.2e-27     142     198 ..      19      92 ..       1      93 [. 0.82

  Alignments for each domain:
  == domain 1    score: 95.1 bits;  conditional E-value: 6.9e-31
   PF13087.1 142 e.................ievstvDgfQGrEkdviilslVRsnekkkvgflkderrlNVAlTRAkrkliivGnk 198
                 +                 ievs+vDg+QGrEk+vi++s+VRsn+++++gf++d+rrlNVAlTRA+r li++G++
  MMETSP1325-20131115|7632_1  19 QeqsdagmevfgedsrpsIEVSSVDGYQGREKEVILFSAVRSNPEGRIGFVADRRRLNVALTRARRGLIVFGDA 92 
                 234445555666666666******************************************************97 PP

>> PF13538.1  Family description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.4e-06     0.011      37     103 ..      23      88 ..       2      89 .. 0.65

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.4e-06
   PF13538.1  37 edketvraddeevkydvk...layaltihkaqGsefdaVvvpdpdaa.afr...elrrrllYtavTRAkeklvl 103
                 + + +v+ +             + ++++   qG e +++++  + +  + r     +rr+l +a+TRA++ l++
  MMETSP1325-20131115|7632_1  23 DAGMEVFGE--------DsrpSIEVSSVDGYQGREKEVILFSAVRSNpEGRigfVADRRRLNVALTRARRGLIV 88 
                 222222221........1346999***********8766666666656444777899999**********9987 PP

>> PF01443.13  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.6e-05     0.072     177     225 ..      35      89 ..      11      90 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.6e-05
  PF01443.13 177 r...vttvhevqGltfdkVtlvldketdlllis...srenllvAlTRhrkslvil 225
                 +   v+ v + qG + ++  +   +++++  i    +r  l vAlTR+r++l+++
  MMETSP1325-20131115|7632_1  35 PsieVSSVDGYQGREKEVILFSAVRSNPEGRIGfvaDRRRLNVALTRARRGLIVF 89 
                 14559999999***9998888777677766666789***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 596.54
//
Query:       MMETSP1325-20131115|7635_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       460  (0.0336454); expected 273.4 (0.02)
Passed bias filter:                      435  (0.0318169); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|7633_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 868.68
//
Query:       MMETSP1325-20131115|7636_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.017   14.2   0.1      0.028   13.6   0.0    1.5  1  PF00036.27 EF hand
      0.032   14.2   0.2      0.044   13.8   0.1    1.3  1  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.1e-06     0.028       6      27 ..      26      47 ..      21      49 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 4.1e-06
                HHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  6 FkefDkDgdGkIsfeEfkealk 27
                   +D Dgd +Is  Ef +++ 
  MMETSP1325-20131115|7636_1 26 ATRYDDDGDTRISIPEFTTFIG 47
                5689*************99875 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   6.4e-06     0.044      35      66 .]      15      46 ..       3      46 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 6.4e-06
   PF13499.1 35 deevrevldyifkelDkngdGvlsfeEflqai 66
                d++ +  + ++  ++D +gd ++s +Ef ++i
  MMETSP1325-20131115|7636_1 15 DGSEEAAIIELATRYDDDGDTRISIPEFTTFI 46
                55556666677789**************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|7637_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 254.31
//
Query:       MMETSP1325-20131115|7627_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-14   51.1   1.0    1.6e-13   50.4   0.7    1.3  1  PF00280.13 Potato inhibitor I family
  ------ inclusion threshold ------
      0.022   14.3   0.1      0.036   13.6   0.1    1.4  1  PF11720.3  Peptidase inhibitor I78 family
       0.13   12.5   0.0       0.22   11.8   0.0    1.3  1  PF10718.4  Hypothetical chloroplast protein Ycf34


Domain annotation for each model (and alignments):
>> PF00280.13  Potato inhibitor I family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.7   3.6e-17   1.6e-13       8      58 ..     155     205 ..     154     206 .. 0.98

  Alignments for each domain:
  == domain 1    score: 50.4 bits;  conditional E-value: 3.6e-17
                 ---BHHHHHHHHHHH-TTSEEEEEE-----SSSE-TTEEEEEEE----EES CS
  PF00280.13   8 vGvkgeeAkeiIekenpdvtvvvlpegspvtadfrcnRVrvfvdengiVvr 58 
                 vG++geeA+e+I+   p+++ +++ ++++vt+d++ nRVr+fvd++g+V+r
  MMETSP1325-20131115|7627_1 155 VGKSGEEAREVINSIEPSIKTQIVDKDAMVTMDHDVNRVRIFVDKKGNVAR 205
                 9************************************************97 PP

>> PF11720.3  Peptidase inhibitor I78 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   7.9e-06     0.036      29      56 ..     178     205 ..     155     207 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 7.9e-06
   PF11720.3  29 lrpGdmvTmdyrpeRlnvevdengvIsa 56 
                 +    mvTmd+  +R+ + vd +g +++
  MMETSP1325-20131115|7627_1 178 VDKDAMVTMDHDVNRVRIFVDKKGNVAR 205
                 555579*****************99875 PP

>> PF10718.4  Hypothetical chloroplast protein Ycf34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.8e-05      0.22      34      76 ..     166     207 ..     157     208 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.8e-05
   PF10718.4  34 fepkePvihvnirdlkeeeveieWDvrsCesfveeagkWsrlr 76 
                 +++ eP+i+ +i+d k+  v ++ Dv+  + fv+++g+ +r r
  MMETSP1325-20131115|7627_1 166 INSIEPSIKTQIVD-KDAMVTMDHDVNRVRIFVDKKGNVARQR 207
                 56789********9.9********************9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.55
# Mc/sec: 1063.11
//
Query:       MMETSP1325-20131115|7639_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 244.33
//
Query:       MMETSP1325-20131115|7644_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 762.92
//
Query:       MMETSP1325-20131115|7640_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 343.01
//
Query:       MMETSP1325-20131115|7647_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 693.41
//
Query:       MMETSP1325-20131115|7646_1  [L=318]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-78  261.9   1.3    6.6e-78  261.6   0.9    1.0  1  PF00224.16 Pyruvate kinase, barrel domain
  ------ inclusion threshold ------
      0.016   14.6   2.4      0.021   14.2   0.9    1.9  2  PF02887.11 Pyruvate kinase, alpha/beta domain


Domain annotation for each model (and alignments):
>> PF00224.16  Pyruvate kinase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.6   0.9   9.7e-82   6.6e-78      76     344 ..      13     275 ..       5     279 .. 0.95

  Alignments for each domain:
  == domain 1    score: 261.6 bits;  conditional E-value: 9.7e-82
                 -B-----SB------EEEEE--CCCTTB--TTEEE-S-TTHHHHS----EEEE----EEEEEEE----E.EEEEEEE---B------B---------SS-HHHHHHHH---TT--SEEEETTE-SHHHHHHHHHH-------SEEEEEE-S----TT.HHHHHHH----EEE-------S-CCCHHHHHHHH---TTT-----EEESSTTGGGGTSSS--CHHHHHHHHHHH----EEEE---------HHHHHHHHHHHHHHHHHCS-H CS
  PF00224.16  76 llkdgkkeielkegdkllvstdeklkkegdkekiavdyknlvkdvevGktilvdDGvlslkvlevddekelkvevenegvlssrkgvnlpgtkvdlpalsekDkadlkfgvkqgvdliaasfvRkaedvkevRevleekgkeikiiakienqegven.ldeileasdgimvaRGDlGieipaekvvlaqkllikkcnlagkpvitatqmlesmiknPrptRaevsDvanavldGaDavmLsgetakGkyPveavkamaevaleaekalke 344
                 +++  ++ + l+eg+k+++++d +l ++     +++  ++++  +++ +++l+dDG++ ++v e  +   ++++v ++g++s+rkgvn p     +  l+ kD++dl+f  + +vd +a+sfv k  d+ e++e+++e    +k++ak+e+  +v++ l +i+   dgimvaRGDlG+e+ +e+v+++qk++i+ c++ g pv++atqmlesmi++P ptRae+sDva a+ dGaDavmLs+e+a+GkyP+ av++++++  + e++  +
  MMETSP1325-20131115|7646_1  13 VFES-DTGVVLVEGQKFRFDLDPELGTA---TRVQLPHPEIIGTLRPNDSLLIDDGKMRMTVIENGEGY-VECRVDVGGKISNRKGVNTPTIVTPISPLTKKDREDLEFIKTLDVDWVALSFVQKPGDIVEMKELIGEV--PLKVMAKLEKPSAVTEyLKDIVALCDGIMVARGDLGVEMAVEDVPVMQKKIIEECQRQGTPVVVATQMLESMIESPTPTRAEASDVATAIYDGADAVMLSAESAAGKYPELAVQTQQKIISRVERSAYY 275
                 5555.66899**************9966...89*******************************99988.****************************************99*************************96..6899**********6659*****************************************************************************************************9999987655 PP

>> PF02887.11  Pyruvate kinase, alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.44     3e+03      42      50 ..     208     216 ..     198     271 .. 0.57
   2 ?   14.2   0.9   3.1e-06     0.021       1      25 [.     293     317 ..     293     318 .] 0.96

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.44
                 EEEEES-HH CS
  PF02887.11  42 Ilavtpsee 50 
                 +++ t+  e
  MMETSP1325-20131115|7646_1 208 VVVATQMLE 216
                 444443333 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 3.1e-06
                 HHHHHHHHHHHHHHHT-SEEEEE-- CS
  PF02887.11   1 teaiaeaaveaAkelgakaIvvlte 25 
                 t+ai ++a+ +A++++akaI+v+t+
  MMETSP1325-20131115|7646_1 293 TDAITSSARLVASSVNAKAIIVFTK 317
                 89*********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       460  (0.0336454); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.57
# Mc/sec: 1313.86
//
Query:       MMETSP1325-20131115|7649_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-19   68.8   0.0    3.6e-19   68.5   0.0    1.0  1  PF00709.16 Adenylosuccinate synthetase


Domain annotation for each model (and alignments):
>> PF00709.16  Adenylosuccinate synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   0.0   2.7e-23   3.6e-19     220     337 ..      11     186 .]       8     186 .] 0.91

  Alignments for each domain:
  == domain 1    score: 68.5 bits;  conditional E-value: 2.7e-23
  PF00709.16 220 gaqgvll.didhgtypyvTssnttaggalaglgiapqkik.kvlgVvKAY.ttrvGeGpfpteldde........lgeklrek......................................................gkefGattgrpRrcGwlDlvllryalringvtelaltklDvldeld 337
                 g+q+ +l ++  +++++ Ts+nt a+g+la++ +++ k++  v++++K++ ++rvG G+ p  ++++        +      k                                                       +efG+t grpR++G++D+v+  + ++ +g ++  +++ D+ d++d
  MMETSP1325-20131115|7649_1  11 GPQSFWLsNAAEKFWDSGTSANTGAAGMLAASRLNVAKLEsLVINIHKTPgSSRVGGGANPCAFVPQnyfndvngT------KedfekmkldwrdvsktffdlvqpnglvkpavysndtgdydigvamaaascihptHREFGVTSGRPRVVGFFDCVMQAELVANQG-PYTSISAFDRGDDYD 186
                 99*****9999*****************************99***********************99665444332......13455568899999999*************************************999*************************999.99999****999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 891.44
//
Query:       MMETSP1325-20131115|7642_1  [L=478]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-10   39.6   0.0    7.2e-10   38.6   0.0    1.5  1  PF09822.4 ABC-type uncharacterized transport system
    1.7e-05   23.4   0.1    0.00027   19.4   0.0    2.1  1  PF03345.9 Oligosaccharyltransferase 48 kDa subunit beta
     0.0028   16.6   0.1      0.011   14.7   0.0    1.9  2  PF13709.1 Domain of unknown function (DUF4159)
  ------ inclusion threshold ------
      0.014   15.3   0.1      0.045   13.6   0.0    1.9  1  PF14300.1 Domain of unknown function (DUF4375)
      0.017   14.8   0.0      0.033   13.9   0.0    1.4  1  PF06283.6 Trehalose utilisation
      0.082   12.1   0.0       0.16   11.2   0.0    1.4  1  PF07090.6 Protein of unknown function (DUF1355)


Domain annotation for each model (and alignments):
>> PF09822.4  ABC-type uncharacterized transport system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.0   3.1e-13   7.2e-10     172     270 ..      27     117 ..      13     118 .. 0.83

  Alignments for each domain:
  == domain 1    score: 38.6 bits;  conditional E-value: 3.1e-13
   PF09822.4 172 anlraqlsenytvrsldla..teevpadadlLviagPtealsekelfaidqylmrGgkllvfldpf.evepqgrpspaakpesgLedllahyGvtlepsvVl 270
                 ++  ++ s +y+v+  + +  t+++ ++adl+v  gP+e +se+ ++++++y+++Gg++l+++    e++            ++L+ +++++G++++++ V+
  MMETSP1325-20131115|7642_1  27 QKALQAASAQYKVQANKDDlsTDRL-EEADLMVFGGPRERFSERDIENLKEYVNNGGSALFLAGEGgETA----------LGTNLNAVMEEWGMQINDDAVV 117
                 444555566788877754455****.**************************************993333..........268****************997 PP

>> PF03345.9  Oligosaccharyltransferase 48 kDa subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.2e-07   0.00027      66     257 ..      70     263 ..      26     268 .. 0.71

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 1.2e-07
   PF03345.9  66 svkklleFvdkggnvlvalsse...tlpeairellselgielaekktvvvDhfnydtssaeekhdvlv.....leeknaiksdtkvtkke.........keily.kgvgallgnnelvlpiLrapstaysynpkekeeevedpwavGsqlllvsalQarnnaRvvfvGssellsdeafkaevkkakkkaktgNrefakeltkWvfkekgv 257
                 + ++l e+v++gg+ l+++++    +l++++  +++e g++++++  v + +++y   ++   ++ ++     + ++ ++k++ k+++ +         + + +    g +++ +   l +L++   +y  n           +      + + a+ a +  Rv++v+s++l+sd + ++          ++N+++a  l++W ++ek v
  MMETSP1325-20131115|7642_1  70 DIENLKEYVNNGGSALFLAGEGgetALGTNLNAVMEEWGMQINDDAVVRTVYYKYLYPKEVFISNGILqpsiaAMKNVHVKASGKNKAAStapvdtsnnGGLNFvFPYGSTMTVQRPALAVLSSGPISYPLNRP--VAG----VYESPDPAPAEATRAGKRGRVMVVSSLKLFSDDWLDK----------EENNKLADVLFRWLMQEKDV 263
                 5689999*******9999988766669999************99888888888886665555666666555543344444444433333233444444544555445555555555566777777777744432..222....234467789999***********************99..........79***************987 PP

>> PF13709.1  Domain of unknown function (DUF4159)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   4.8e-06     0.011      40     107 ..      41     106 ..      23     119 .. 0.80
   2 ?   -1.4   0.0       0.4   9.1e+02     150     183 ..     218     251 ..     201     277 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 4.8e-06
   PF13709.1  40 epqavdlsddeLfkyPflyltghgdlklsdeevanLreYlrrGGfllvDdrdgqaarfdasfrrlmkr 107
                 + ++ dls+d+L ++ +  + g+++ ++s+++++nL+eY+++GG  l+ + +g++++ +++ ++ m++
  MMETSP1325-20131115|7642_1  41 A-NKDDLSTDRLEEADLMVFGGPRE-RFSERDIENLKEYVNNGGSALFLAGEGGETALGTNLNAVMEE 106
                 3.66689999999999999999887.79****************999988877777777777776665 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.4
   PF13709.1 150 lagieddgrlvvlitanDlgdawevdeegkrlld 183
                 + ++++ gr++v+ + + ++d w ++ee++ l d
  MMETSP1325-20131115|7642_1 218 ATRAGKRGRVMVVSSLKLFSDDWLDKEENNKLAD 251
                 5556666777777777777777777766666554 PP

>> PF14300.1  Domain of unknown function (DUF4375)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     2e-05     0.045      16      55 ..      71     110 ..      69     127 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2e-05
   PF14300.1  16 ldildseVnnGGfvqffsnsyGefivkeellealrligak 55 
                 ++ l++ VnnGG  +f++   Ge+++  +l + ++++g++
  MMETSP1325-20131115|7642_1  71 IENLKEYVNNGGSALFLAGEGGETALGTNLNAVMEEWGMQ 110
                 567999********************************98 PP

>> PF06283.6  Trehalose utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.5e-05     0.033      22      85 ..      23      83 ..       7      87 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.5e-05
                HHHHHHHHHH.-EEEEEETTSTT---HHH.HHT-SEEEEE---GGGS-HHHHHHHHHHHH---- CS
   PF06283.6 22 tkalaalleesgrfevdvtedpedltdedeLaqydvlvllstsgdelsdeqekalekyveeGgG 85
                ++++++ l+     + +v  + +dl+ + +L+++d++v+ +   + +s+   ++l++yv +Gg 
  MMETSP1325-20131115|7642_1 23 EQWFQKALQ-AASAQYKVQANKDDLSTD-RLEEADLMVFGGPR-ERFSERDIENLKEYVNNGGS 83
                579999999.555555555566687776.6*********9996.8*****************95 PP

>> PF07090.6  Protein of unknown function (DUF1355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   6.9e-05      0.16      82     110 ..      57      90 ..      42     103 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.9e-05
   PF07090.6  82 l.....rsketperlkllkeyVeeGgaLlmvgGe 110
                 +     r +  ++ ++ lkeyV++Gg+ l ++Ge
  MMETSP1325-20131115|7642_1  57 MvfggpRERFSERDIENLKEYVNNGGSALFLAGE 90 
                 4444445556788999***************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.85u 0.36s 00:00:01.21 Elapsed: 00:00:00.59
# Mc/sec: 1941.46
//
Query:       MMETSP1325-20131115|7651_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.3   0.3       0.02   14.3   0.2    1.5  2  PF05360.9 yiaA/B two helix domain
      0.037   12.8   0.7      0.041   12.7   0.5    1.0  1  PF05653.9 Magnesium transporter NIPA


Domain annotation for each model (and alignments):
>> PF05360.9  yiaA/B two helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1      0.63   4.3e+03      14      22 ..       7      15 ..       4      16 .. 0.67
   2 ?   14.3   0.2   2.9e-06      0.02       1      23 [.      21      43 ..      21      48 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.63
   PF05360.9 14 vlyliGlwn 22
                ++ + G+++
  MMETSP1325-20131115|7651_1  7 AIISGGIYF 15
                456678875 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 2.9e-06
   PF05360.9  1 fvilawvafvlgvvlyliGlwna 23
                f+ +  ++fv+gvv + +Gl+++
  MMETSP1325-20131115|7651_1 21 FTLFQAILFVIGVVGVFVGLYYL 43
                6677889**************98 PP

>> PF05653.9  Magnesium transporter NIPA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.5     6e-06     0.041     249     296 ..       2      49 ..       1      53 [. 0.86

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 6e-06
   PF05653.9 249 lfttlvivasailfkefleqsvddvlgelcGfltillgvfllhatrdi 296
                  f  ++i+++ i fkef++ ++ + +  ++G++ +++g++ l    d+
  MMETSP1325-20131115|7651_1   2 NFILFAIISGGIYFKEFETFTLFQAILFVIGVVGVFVGLYYLVPEDDE 49 
                 577789********************************9988665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       599  (0.0438122); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        80  (0.00585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 469.49
//
Query:       MMETSP1325-20131115|7652_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 353.15
//
Query:       MMETSP1325-20131115|7656_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-09   36.4   0.0    4.5e-09   36.1   0.0    1.1  1  PF00246.19 Zinc carboxypeptidase
    4.1e-05   22.7   0.0    4.2e-05   22.6   0.0    1.0  1  PF10994.3  Protein of unknown function (DUF2817)
  ------ inclusion threshold ------
      0.012   14.4   0.0      0.012   14.4   0.0    1.1  1  PF04952.9  Succinylglutamate desuccinylase / Aspartoacylase family


Domain annotation for each model (and alignments):
>> PF00246.19  Zinc carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   9.9e-13   4.5e-09      44     128 ..       3      70 ..       1      72 [] 0.93

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 9.9e-13
                 TTSEEEEEEE-SSTT-THHHHHHHHHHHHHHCCCTCHHHHHHHHHEEEEEES-S-----HHHHHT-TT--S-----T---GGG-S CS
  PF00246.19  44 pgkpvvlvdagiHarEwvgseallyllrqLlsayrdeeikrlldktdiyivPvlNPDGyelsstgdrawrkgRsnangvDlnRnF 128
                 + kp+vlv++g+H+ E+ g + ++ +l+  ++        +++ k++i++ P++ P Gye+           R+n+  +D nR+F
  MMETSP1325-20131115|7656_1   3 ESKPTVLVTGGVHGYETSGVQGAILFLQTRAT--------EYVGKYNIVVCPCVSPWGYEHIE---------RWNSICLDPNRSF 70 
                 78************************997776........5699*******************.........99*********99 PP

>> PF10994.3  Protein of unknown function (DUF2817)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   9.1e-09   4.2e-05      53     118 ..       7      70 ..       1      72 [] 0.78

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 9.1e-09
   PF10994.3  53 lLvltsGthGvEGfaGsaiqlalLkea.laeslakgvavllvHalNPyGfahlrrvnenNVDLnRNF 118
                 ++++t G+hG E    s++q a+L  +  a++   ++++++  ++ P+G+ h  r n   +D nR F
  MMETSP1325-20131115|7656_1   7 TVLVTGGVHGYE---TSGVQGAILFLQtRATEYVGKYNIVVCPCVSPWGYEHIERWNSICLDPNRSF 70 
                 555667777766...477776655443268888999*****************************99 PP

>> PF04952.9  Succinylglutamate desuccinylase / Aspartoacylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.6e-06     0.012       2      54 ..       5      58 ..       4      72 .] 0.65

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.6e-06
                --CEEEE-------HHHHHHHHHHHHHHHHHB.ESSCEEEEC-S-HHHHHHTSS CS
   PF04952.9  2 gpkvlisaGvHGnElaGvellrqllkqleead.ilgeitlvplaNppAiaagsR 54
                 p+vl+++GvHG E++Gv  +  +l+  +        i++ p + p + ++ +R
  MMETSP1325-20131115|7656_1  5 KPTVLVTGGVHGYETSGVQGAILFLQTRATEYvGKYNIVVCPCVSPWGYEHIER 58
                69***************9755444444444443555555666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.61
# Mc/sec: 282.85
//
Query:       MMETSP1325-20131115|7655_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-17   62.3   0.0    3.8e-17   62.1   0.0    1.1  1  PF00069.20 Protein kinase domain
    2.8e-08   33.0   0.0    4.3e-08   32.4   0.0    1.2  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.0   5.6e-21   3.8e-17     156     260 .]       4     113 ..       1     113 [. 0.90

  Alignments for each domain:
  == domain 1    score: 62.1 bits;  conditional E-value: 5.6e-21
                 SS----GGGS-HHHHH..TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH...HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 156 ttlvgtreYmAPEvll..kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks...eelkdlikkllekdpakRltaeeilkhpwl 260
                 + + gt+++mAPE +   +  + ++++DvWslG  +++++ g++p++  + ++ ++l+++i + ++e + + + ++    +el+ ++++++ +dp++R+  +e++++ w+
  MMETSP1325-20131115|7655_1   4 SGMAGTPYFMAPEAIDsdTFGKCGRRSDVWSLGGFVFQMIVGRPPWKALKMKSPYQLFARITRSTTETPMDVDPPRTeisAELRTFLDRCFIHDPESRPHSHELMNDAWV 113
                 6789**********9944556889*************************************9999999887766555666***************************996 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   6.3e-12   4.3e-08     170     256 ..      11     108 ..       2     110 .. 0.73

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 6.3e-12
                 GGS-HHHHHHSE...EEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-B........S.---TTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  PF07714.12 170 kWmapEslkekk...ftsksDvWsfGvllwEiftlgespypglsneevlellkegkr........l.ekpekcpeelyelmkqCweeepeeRptfkelv 256
                  +mapE++++ +   +  +sDvWs G +++ ++  g+ p++ l+ ++ ++l+ + +r        + +  +++++el +++ +C+ ++pe+Rp+ +el+
  MMETSP1325-20131115|7655_1  11 YFMAPEAIDSDTfgkCGRRSDVWSLGGFVFQMIV-GRPPWKALKMKSPYQLFARITRsttetpmdVdPPRTEISAELRTFLDRCFIHDPESRPHSHELM 108
                 58*******998555678**************99.99**998866664444433333111222222123356899******************998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 748.25
//
Query:       MMETSP1325-20131115|7654_1  [L=494]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-05   24.3   0.0    2.6e-05   23.4   0.0    1.4  1  PF04884.9 Protein of unknown function (DUF647)


Domain annotation for each model (and alignments):
>> PF04884.9  Protein of unknown function (DUF647)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   1.9e-09   2.6e-05     180     241 ..     227     288 ..     209     290 .. 0.93

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 1.9e-09
   PF04884.9 180 etlvsllGllvgillasvvsssalltwvalllllvvhllanykavrsvqlrtLNrqRasivl 241
                 +t+  l+Gl +g++la+v  ss+  +wv++++l++vhl+a+   +r ++l +++ +R+  +l
  MMETSP1325-20131115|7654_1 227 STVPGLMGLCLGLALARVAASSTRTSWVWFGVLTAVHLFACRCGLRLLSLPHVTLHRLDSIL 288
                 566789************************************************99998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.38s 00:00:01.14 Elapsed: 00:00:00.70
# Mc/sec: 1691.14
//
Query:       MMETSP1325-20131115|7659_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        3.3    7.7  20.7        1.2    9.1   6.2    2.1  2  PF03247.9  Prothymosin/parathymosin family


Domain annotation for each model (and alignments):
>> PF03247.9  Prothymosin/parathymosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   6.2   8.8e-05       1.2      59      87 ..       9      37 ..       6      42 .. 0.85
   2 ?    4.9   2.7    0.0019        26      61      77 ..      70      86 ..      48      87 .] 0.67

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 8.8e-05
   PF03247.9 59 eedeeeegegeeeeeeeeeeeegatvkra 87
                +e+eeeege ++ ++++ e++++ ++kr 
  MMETSP1325-20131115|7659_1  9 DEGEEEEGESDDYDDDDGENNDEGSGKRQ 37
                67889999999999999999999999996 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0019
   PF03247.9 61 deeeegegeeeeeeeee 77
                de ee+ege ++ ++++
  MMETSP1325-20131115|7659_1 70 DEGEEEEGESDDYDDDD 86
                44444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|7657_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-32  111.0   0.5    9.4e-32  110.7   0.4    1.1  1  PF12931.2 Sec23-binding domain of Sec16


Domain annotation for each model (and alignments):
>> PF12931.2  Sec23-binding domain of Sec16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.7   0.4   6.9e-36   9.4e-32       2     232 ..      21     273 ..      20     290 .. 0.84

  Alignments for each domain:
  == domain 1    score: 110.7 bits;  conditional E-value: 6.9e-36
   PF12931.2   2 ilklLltGerekAvelavdqrlWahAllisstlgkekwkqVvqefireevkvgknskkltelLavlyevfagnveeside....lvpksavsnleeesaaknWretvalilsNrssddsqallalGklLlsygr..veaahicfllarvplspkpvlddseakfellgl...............tslndlesilltEvYEfalsll...........kaspkfgiphLlayKlvhAavLaeyGlkseaqkYcdaiasalkstt 232
                 + ++L++G re+ +e a+++  Wa+A++i+s+ + ek+++Vv  f++ e++ g+     t+ +a+++   +g+ e+++++    l++++a ++ +++    +Wre +a +++Nrs+  ++ +  lG+ L s +   v+aah  +l a+  l  +pv+ ++++++ llgl               + +++ e++  tEv+E+a++l            +a++ ++++ L+++Kl +A++La+ G++ +a+ Y+  + s+  ++t
  MMETSP1325-20131115|7657_1  21 VSAHLIRGAREEGLEIAIKHEAWALAMVIASVCSNEKYQEVVRLFADAELSHGTP----THTMALVF---SGQAENAVKSggktLYANQA-NSGSANTLLRKWRENLAGLVANRSNGWEALVVQLGDRLRSDEVddVAAAHCAYLAAG--LGVGPVQAGQQVRMALLGLehgstaamrnliarlAVPESVEALQRTEVLEWATCLGgrqgkaasgpvSAEALVKMAPLQQLKLLYAMHLADLGETRKAEAYMRSLRSLADTAT 273
                 7899***********************************************9999....89999876...78877777763223555533.33345566667**************99988888*****9986533899999999996..67778999999****************9999999899999999999*********988887665554444445799999**********************998887766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.62
# Mc/sec: 1383.70
//
Query:       MMETSP1325-20131115|7661_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.054   13.4   0.1      0.059   13.2   0.0    1.1  1  PF12173.3 Bacteriocin class IIc cyclic gassericin A-like
       0.12   11.7   0.0       0.12   11.6   0.0    1.1  1  PF03445.8 Putative nucleotidyltransferase DUF294


Domain annotation for each model (and alignments):
>> PF12173.3  Bacteriocin class IIc cyclic gassericin A-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.7e-06     0.059      23      73 ..      11      60 ..       3      68 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 8.7e-06
   PF12173.3 23 lvvalllataniyfiadklGiqlatatarklldavasGaslgtafaiilGv 73
                l +a + +  ni+ +  +  i la  ta+ +l a   G++  ta+ ++ G+
  MMETSP1325-20131115|7661_1 11 LTLARV-SVRNIFVLMHHKEICLAVDTAKMILAAFPPGGAAPTAWLVVGGI 60
                445555.789**********************************9988776 PP

>> PF03445.8  Putative nucleotidyltransferase DUF294
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.8e-05      0.12      17      63 ..      18      65 ..       7      69 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.8e-05
   PF03445.8 17 aealhrllaelndalarrlielaeeelgpp.pvpyaflvmGSegReEq 63
                ++++  l+ +    la    +++++ + p   +p a+lv+G  gR++q
  MMETSP1325-20131115|7661_1 18 VRNIFVLMHHKEICLAVDTAKMILAAFPPGgAAPTAWLVVGGIGRKDQ 65
                55555555555555666677888888888569**************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|7663_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       462  (0.0337917); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.49
# Mc/sec: 1168.84
//
Query:       MMETSP1325-20131115|7666_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 474.83
//
Query:       MMETSP1325-20131115|7670_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|7671_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 444.32
//
Query:       MMETSP1325-20131115|7669_1  [L=330]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.3   0.0       0.11   12.4   0.0    1.4  1  PF07798.6 Protein of unknown function (DUF1640)


Domain annotation for each model (and alignments):
>> PF07798.6  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.1e-06      0.11      39     107 ..     258     326 ..     252     329 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.1e-06
   PF07798.6  39 vakdlvtkeeqekseyqqksdlaklkselvsleksefsnlqaeneklksdleklknkLrdeinkvraev 107
                 +++  vt +  e+++   ++ ++++   + ++++  +s + a  ekl+ ++ k+ +++ +e+ k  ae+
  MMETSP1325-20131115|7669_1 258 LSSGAVTGAAAEIAKDGGRASFKEAATKVKRMSRASLSFTAAAAEKLQREIAKVSADVAQEMWKSDAEM 326
                 677789999999999999999********************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1460  (0.106788); expected 273.4 (0.02)
Passed bias filter:                      406  (0.0296957); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.33s 00:00:01.09 Elapsed: 00:00:00.55
# Mc/sec: 1437.81
//
Query:       MMETSP1325-20131115|7672_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 609.07
//
Query:       MMETSP1325-20131115|7674_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   15.0   5.8      0.014   14.9   4.0    1.1  1  PF12810.2 Glycine rich protein


Domain annotation for each model (and alignments):
>> PF12810.2  Glycine rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   4.0     1e-06     0.014     123     203 ..      12      96 ..       3     137 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1e-06
   PF12810.2 123 dssggsgggleggngtsngsnstggtqtsggegassne..ngsfgsgg.sgnsgggGgGyfGGgsgkesgg.GgGGSSfisgkdg 203
                 ++ gg g g + gng   gs+    + ++ g+++ +++    ++g++  +++   gG+ + GG +g++++g Gg G  + + k  
  MMETSP1325-20131115|7674_1  12 FGGGGVGQGDVEGNGARLGSQDRITFRDKDGKSVPRTGldRPKEGKHDeNNDPHVGGNTWAGGTGGSDTAGlGGRGGPYRLDKGH 96 
                 566888888888899888888889999999999766553323333333133449************8886668888888776644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       621  (0.0454213); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 753.14
//
Query:       MMETSP1325-20131115|7676_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 564.48
//
Query:       MMETSP1325-20131115|7677_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 336.41
//
Query:       MMETSP1325-20131115|7668_1  [L=572]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.064   12.9   0.0        8.3    6.2   0.0    2.6  2  PF10939.3 Protein of unknown function (DUF2631)
        4.8    7.2  12.0       0.78    9.8   1.6    3.3  3  PF12648.2 TcpE family


Domain annotation for each model (and alignments):
>> PF10939.3  Protein of unknown function (DUF2631)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0012       8.3      34      60 ..      90     116 ..      76     118 .. 0.88
   2 ?    3.8   0.0    0.0067        46      24      48 ..     385     409 ..     380     416 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0012
   PF10939.3  34 iaglisalflLamliGNHkGkvEdifL 60 
                 ++gl+ ++++L+ +  N +G v d +L
  MMETSP1325-20131115|7668_1  90 VVGLLLIVMMLIAIGVNTEGTVRDYWL 116
                 6899999999999999**********9 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.0067
   PF10939.3  24 WsgeaprtiqiaglisalflLamli 48 
                 W + + r   +ag+++++ + a+l+
  MMETSP1325-20131115|7668_1 385 WDHASDRLGYAAGWFVVICVFALLF 409
                 99999999********998887765 PP

>> PF12648.2  TcpE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.6   0.00011      0.78      23      79 ..     194     250 ..     185     252 .. 0.72
   2 ?   -1.4   0.1      0.32   2.2e+03      35      72 ..     339     378 ..     337     387 .. 0.76
   3 ?    2.1   0.2     0.027   1.8e+02      30      55 ..     393     418 ..     383     439 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00011
   PF12648.2  23 pvtleqlgvfvvllivlvlilrllggvfvilp...fengwlllylvipgvltwllsklkp 79 
                 ++tl ++  +++++++++ ++r+l+g  ++++   ++  ++++y+ ipg+ + ++++ + 
  MMETSP1325-20131115|7668_1 194 GITLATI--LITSVLLIARMTRVLYGG-KFFQgrmMKILFMMIYFTIPGISMLIAKTWQC 250
                 4778888..666666666666666654.33444779999***********9999987765 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.32
   PF12648.2  35 llivlvlilrllggvfvilp..fengwlllylvipgvltw 72 
                 +++vl l+ rl+++++ ++   f ++++ l +++ +v+ w
  MMETSP1325-20131115|7668_1 339 WFAVLDLLRRLVPSLMIVIEdrFLQIVTGLLVLVGYVVLW 378
                 7788888899999888878788888887777777777766 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.027
   PF12648.2  30 gvfvvllivlvlilrllggvfvilpf 55 
                 g+ +++++v+++++ l++ + + l +
  MMETSP1325-20131115|7668_1 393 GYAAGWFVVICVFALLFATIGDELDI 418
                 55555555555555555544333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       691  (0.0505413); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.93u 0.37s 00:00:01.30 Elapsed: 00:00:00.57
# Mc/sec: 2363.30
//
Query:       MMETSP1325-20131115|7678_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        3.7    7.2  10.6       0.65    9.6   2.1    2.5  2  PF00130.17 Phorbol esters/diacylglycerol binding domain (C1 domain)


Domain annotation for each model (and alignments):
>> PF00130.17  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.1   4.7e-05      0.65      20      43 ..      30      54 ..      24      63 .. 0.87
   2 ?    1.7   0.8     0.014     2e+02       5      34 ..      65     104 ..      58     110 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 4.7e-05
                B---.------EETTT--B--STT- CS
  PF00130.17 20 flwg.kgkqglkCswCqllvHkkCf 43
                +lw+ ++++g++C+ C+ lv  +C 
  MMETSP1325-20131115|7678_1 30 SLWHrFKSPGCTCDVCKSLVELHCR 54
                569999**************99995 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.014
                 ----SS--B-TTT-SB-.........--.------EETTT CS
  PF00130.17   5 hrnfkqptfCkhCgkfl.........wg.kgkqglkCswC 34 
                 + nf++++ Ck   k +         ++ ++ ++ +C  C
  MMETSP1325-20131115|7678_1  65 AENFPNCGACKMWSKVItlahayrakKEaEEANAGSCLPC 104
                 4578888888877777766666666544466666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 510.34
//
Query:       MMETSP1325-20131115|7679_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 793.79
//
Query:       MMETSP1325-20131115|7680_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 1310.35
//
Query:       MMETSP1325-20131115|7682_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 384.42
//
Query:       MMETSP1325-20131115|7682_2  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 361.80
//
Query:       MMETSP1325-20131115|7683_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 448.68
//
Query:       MMETSP1325-20131115|7686_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 440.15
//
Query:       MMETSP1325-20131115|7688_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-30  105.6   3.7    2.1e-30  105.4   2.5    1.0  1  PF03635.12 Vacuolar protein sorting-associated protein 35
  ------ inclusion threshold ------
      0.037   12.5   0.1      0.062   11.8   0.0    1.4  1  PF07982.7  Herpes UL74 glycoproteins
      0.048   12.5   0.6      0.051   12.5   0.4    1.0  1  PF01544.13 CorA-like Mg2+ transporter protein
      0.052   12.8   1.3      0.062   12.5   0.9    1.1  1  PF03357.16 Snf7
       0.11   12.1   1.1       0.26   10.9   0.7    1.6  1  PF11577.3  NF-kappa-B essential modulator NEMO


Domain annotation for each model (and alignments):
>> PF03635.12  Vacuolar protein sorting-associated protein 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.4   2.5   7.9e-34   2.1e-30       2      92 ..       9      99 ..       8     100 .] 0.98

  Alignments for each domain:
  == domain 1    score: 105.4 bits;  conditional E-value: 7.9e-34
  PF03635.12  2 lleeaiavvkeqsalmkraldedklmdalkhasnmLsELrtssLsPkkYYeLymkvfdeLevLsayledekkkkkkladlYelVQyagniv 92
                ll+++++ vkeq+++mkra+d+++l++alk a  mL+EL+tssL+P++YY+Lymkv deL++L++++   ++++  + +lYe VQ +g ++
  MMETSP1325-20131115|7688_1  9 LLDQSTKSVKEQAFYMKRAMDQNDLKEALKFAKDMLKELKTSSLTPRNYYDLYMKVLDELRYLEEFFMTLQRNGTAVSELYEQVQSCGMVL 99
                6899************************************************************************************986 PP

>> PF07982.7  Herpes UL74 glycoproteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.3e-05     0.062     283     318 ..      55      90 ..      35      95 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.3e-05
   PF07982.7 283 tqlrdlatwvyttlryrdepfcksdrnrtavsefmk 318
                  +  dl   v   lry +e f   +rn tavse+  
  MMETSP1325-20131115|7688_1  55 RNYYDLYMKVLDELRYLEEFFMTLQRNGTAVSELYE 90 
                 456799999************************875 PP

>> PF01544.13  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.4   1.8e-05     0.051     141     227 ..       8      94 ..       2      97 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.8e-05
  PF01544.13 141 l.edetkkellreilqlrrelvrl..rrallplrdvlkrllrrkdkkllteedkeylrdlldelerllemaealrerlrslqdtylslls 227
                 +  d+++k++ ++ ++++r + +   + al+  +d+lk+l+++++++    +    +  +ldel+ l+e   +l+   + ++++y +++s
  MMETSP1325-20131115|7688_1   8 VlLDQSTKSVKEQAFYMKRAMDQNdlKEALKFAKDMLKELKTSSLTPRNYYDL---YMKVLDELRYLEEFFMTLQRNGTAVSELYEQVQS 94 
                 44677788888888888877554444****************99999999999...*****************************99876 PP

>> PF03357.16  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.9   2.3e-05     0.062      56     131 ..       6      82 ..       4      91 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
  PF03357.16  56 qldqldgqlanleqvalaienaksnkevlnamkqgakamkam.nkkmdidkidklmdeiedqmekadeisealsrsl 131
                 q+  ld+++ +++++a+ ++ a++++++ +a+k + + +k+   + + + +  +l +++ d++ + +e   +l+r+ 
  MMETSP1325-20131115|7688_1   6 QRVLLDQSTKSVKEQAFYMKRAMDQNDLKEALKFAKDMLKELkTSSLTPRNYYDLYMKVLDELRYLEEFFMTLQRNG 82 
                 677799***********************************966778888888888888888888888777777665 PP

>> PF11577.3  NF-kappa-B essential modulator NEMO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.7   9.4e-05      0.26      13      31 ..      28      46 ..      17      49 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 9.4e-05
   PF11577.3 13 eenhdLkealkqsNqamKe 31
                ++ +dLkealk   +++Ke
  MMETSP1325-20131115|7688_1 28 MDQNDLKEALKFAKDMLKE 46
                6789**************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       931  (0.0680954); expected 273.4 (0.02)
Passed bias filter:                      706  (0.0516384); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.44s 00:00:00.88 Elapsed: 00:00:00.60
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|7687_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-13   49.9   0.0    3.7e-13   49.5   0.0    1.1  1  PF08190.7  pre-RNA processing PIH1/Nop17
     0.0016   18.1   0.5      0.014   15.1   0.0    2.3  2  PF00011.16 Hsp20/alpha crystallin family


Domain annotation for each model (and alignments):
>> PF08190.7  pre-RNA processing PIH1/Nop17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.0   5.4e-17   3.7e-13     256     328 .]      10      83 ..       2      83 .. 0.92

  Alignments for each domain:
  == domain 1    score: 49.5 bits;  conditional E-value: 5.4e-17
   PF08190.7 256 segvpkelvieieLPgvksvaevdLrvsedrllleveke...kYrLdlkLpypvdeeeaeAkFnkkkktLtvtlpV 328
                 +  +p++l i+ieLP+++ ++ +dL+v+ ++l+l++ k+   +Y L+lk+pypv  e++ AkF  k+  Ltvt+pV
  MMETSP1325-20131115|7687_1  10 QMRRPQQLRIKIELPLLDKASGLDLDVNDTELVLKMAKKqraNYALTLKMPYPVIGERGGAKF--KNGVLTVTVPV 83 
                 6789*******************************9999999*********************..57899***998 PP

>> PF00011.16  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     2e-06     0.014      51      91 ..      47      87 ..       9      95 .. 0.73
   2 ?   -2.5   0.1      0.61   4.2e+03      37      39 ..     114     116 ..      99     132 .. 0.46

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2e-06
  PF00011.16 51 erssrkFkrkfkLPenvdkdkvkaslkdGvLtvtvpkkkpe 91
                ++++ ++  ++k+P  v  ++  a++k+GvLtvtvp ++p+
  MMETSP1325-20131115|7687_1 47 KKQRANYALTLKMPYPVIGERGGAKFKNGVLTVTVPVQPPP 87
                34556788889999999999999*************98886 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.61
  PF00011.16  37 ehe 39 
                 ++ 
  MMETSP1325-20131115|7687_1 114 TEV 116
                 332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 699.35
//
Query:       MMETSP1325-20131115|7689_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.6   0.2        7.4    5.8   0.0    3.4  4  PF01410.13 Fibrillar collagen C-terminal domain


Domain annotation for each model (and alignments):
>> PF01410.13  Fibrillar collagen C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0    0.0021        29     175     198 ..      16      39 ..       7      47 .. 0.86
   2 ?    2.6   0.0    0.0049        67     177     199 ..      43      65 ..      37      68 .. 0.85
   3 ?    5.8   0.0   0.00054       7.4     172     198 ..      63      89 ..      57      96 .. 0.88
   4 ?    0.1   0.0     0.029   3.9e+02     178     195 ..      94     111 .]      88     111 .] 0.86

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.0021
  PF01410.13 175 ktvlevktkkverLPivDialsdi 198
                 + +++++t++ er P+ D+a  ++
  MMETSP1325-20131115|7689_1  16 RMTVTFDTSQPERSPLNDVAARNM 39 
                 678899*************99876 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.0049
  PF01410.13 177 vlevktkkverLPivDialsdig 199
                  l+++t++ er P+ D+a+ ++ 
  MMETSP1325-20131115|7689_1  43 SLTLDTSHPERSPLNDVAPANME 65 
                 57899**************9875 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.00054
  PF01410.13 172 kwgktvlevktkkverLPivDialsdi 198
                 ++++  l+++t++ er P+ D+a+ ++
  MMETSP1325-20131115|7689_1  63 NMERMYLTLDTSQPERSPLNDVAPANM 89 
                 6788999****************9987 PP

  == domain 4    score: 0.1 bits;  conditional E-value: 0.029
  PF01410.13 178 levktkkverLPivDial 195
                 ++++t++ er P+ D+a+
  MMETSP1325-20131115|7689_1  94 FTLDTSQPERSPLNDVAP 111
                 7889***********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 531.99
//
Query:       MMETSP1325-20131115|7690_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00022   20.7   3.1        1.6    8.3   0.5    3.0  3  PF02120.11 Flagellar hook-length control protein FliK
     0.0036   17.0   0.1        1.8    8.2   0.0    2.2  2  PF08897.6  Domain of unknown function (DUF1841)
  ------ inclusion threshold ------
      0.058   13.2   0.0       0.12   12.2   0.0    1.5  1  PF12333.3  Rix1 complex component involved in 60S ribosome maturation
       0.24   11.7   1.6        5.1    7.4   0.2    2.2  2  PF14357.1  Domain of unknown function (DUF4404)


Domain annotation for each model (and alignments):
>> PF02120.11  Flagellar hook-length control protein FliK
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.5   0.00048       1.6      29      64 ..      24      60 ..      20      64 .. 0.91
   2 !    5.7   0.0    0.0031        10      41      68 ..      70      97 ..      64      98 .. 0.93
   3 !    8.0   0.0   0.00056       1.9      24      61 ..      96     133 ..      93     146 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00048
  PF02120.11 29 vrlrldgd.qlsvrltaenpetrelLeqnlprLreaL 64
                v+ +l++  ++svrl ++ +++ ++L + +++L+++L
  MMETSP1325-20131115|7690_1 24 VTATLSASvSASVRLLVDVEAVSARLLAEAETLEAQL 60
                56788888889***********************998 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0031
  PF02120.11 41 rltaenpetrelLeqnlprLreaLaeaG 68
                ++ a++pe+   + +++ +L   L +aG
  MMETSP1325-20131115|7690_1 70 QVLADHPEVSTYVADAQTTLAHLLVDAG 97
                788*********************9988 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.00056
  PF02120.11  24 LGkvevrlrldgdqlsvrltaenpetrelLeqnlprLr 61 
                  G+v v+   d++++s r+  e+pe ++ + q+   L 
  MMETSP1325-20131115|7690_1  96 AGTVSVHAMADAGEVSTRFLEEHPEFAKFVAQADGALT 133
                 699************************99999866665 PP

>> PF08897.6  Domain of unknown function (DUF1841)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00053       1.8      19      53 ..      57      91 ..      47     102 .. 0.82
   2 !    6.9   0.0    0.0013       4.6      23      52 ..     104     133 ..      98     141 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00053
   PF08897.6 19 akevlealEaiaaevieeHPEYhalledaeealek 53
                + + + +  a a++v+++HPE  +++ da+++l++
  MMETSP1325-20131115|7690_1 57 EAQLMFEAKARASQVLADHPEVSTYVADAQTTLAH 91
                56777788999****************99998864 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0013
   PF08897.6  23 lealEaiaaevieeHPEYhalledaeeale 52 
                 + +  ++ ++++eeHPE+ + + +a+ al+
  MMETSP1325-20131115|7690_1 104 MADAGEVSTRFLEEHPEFAKFVAQADGALT 133
                 66667788899************9998875 PP

>> PF12333.3  Rix1 complex component involved in 60S ribosome maturation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.5e-05      0.12       7      36 ..     119     148 ..     116     149 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.5e-05
   PF12333.3   7 phirllvlyirsAMTHiapdiRedslkfLd 36 
                 p + ++v++   A+TH  +d+++ sl++L+
  MMETSP1325-20131115|7690_1 119 PEFAKFVAQADGALTHFLTDVKAASLQLLA 148
                 567899*********************996 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.2    0.0015       5.1      33      81 ..      41      90 ..      25      92 .. 0.78
   2 ?    3.5   0.0     0.024        83      56      74 ..     108     126 ..      96     134 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0015
   PF14357.1 33 dieealee.edaseaedeslaerlneaverFeaeHPklagtlrnildsLa 81
                d+e++ ++  +++e  +++l+ + ++ + +  a+HP+++  + +   +La
  MMETSP1325-20131115|7690_1 41 DVEAVSARlLAEAETLEAQLMFEAKARASQVLADHPEVSTYVADAQTTLA 90
                5555555555567778889999999**************99988877777 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.024
   PF14357.1  56 neaverFeaeHPklagtlr 74 
                  e  +rF +eHP+ a+ + 
  MMETSP1325-20131115|7690_1 108 GEVSTRFLEEHPEFAKFVA 126
                 567799*******998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.53
# Mc/sec: 673.69
//
Query:       MMETSP1325-20131115|7675_1  [L=544]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.82u 0.35s 00:00:01.17 Elapsed: 00:00:00.51
# Mc/sec: 2556.11
//
Query:       MMETSP1325-20131115|7691_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 983.50
//
Query:       MMETSP1325-20131115|7693_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 483.88
//
Query:       MMETSP1325-20131115|7694_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.45s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 972.11
//
Query:       MMETSP1325-20131115|7696_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.009   15.9   0.1       0.91    9.4   0.0    2.0  2  PF05103.8  DivIVA protein
     0.0091   15.5   0.1        2.6    7.6   0.0    2.1  2  PF01978.14 Sugar-specific transcriptional regulator TrmB
  ------ inclusion threshold ------
       0.02   14.5   0.0       0.81    9.4   0.0    2.0  2  PF06698.6  Protein of unknown function (DUF1192)
      0.022   14.2   2.0          3    7.3   0.1    2.3  2  PF13250.1  Domain of unknown function (DUF4041)
       0.19   11.4   4.2        3.8    7.3   0.2    2.1  2  PF07821.7  Alpha-amylase C-terminal beta-sheet domain


Domain annotation for each model (and alignments):
>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00033      0.91      16      40 ..       7      31 ..       2      36 .. 0.87
   2 !    5.2   0.0    0.0068        19      16      33 ..      39      56 ..      34      57 .] 0.84

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00033
   PF05103.8 16 rGYdeeeVdeFLdqvikdyeallke 40
                 G +++eVd++  +v ++++a++k 
  MMETSP1325-20131115|7696_1  7 AGLSKAEVDAYVAKVKAEVDAIAKA 31
                599****************999876 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0068
   PF05103.8 16 rGYdeeeVdeFLdqvikd 33
                 G +++eVd++  +v ++
  MMETSP1325-20131115|7696_1 39 AGLSKAEVDAYVAKVKAE 56
                699*********999765 PP

>> PF01978.14  Sugar-specific transcriptional regulator TrmB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00095       2.6       4      23 ..       7      23 ..       4      32 .. 0.75
   2 !    6.5   0.0    0.0022         6       4      18 ..      39      53 ..      37      57 .] 0.83

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00095
  PF01978.14  4 lGLseyEakvYlaLlkkgpa 23
                 GLs+ E+++Y+a +k   a
  MMETSP1325-20131115|7696_1  7 AGLSKAEVDAYVAKVK---A 23
                59*********98553...3 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0022
  PF01978.14  4 lGLseyEakvYlaLl 18
                 GLs+ E+++Y+a +
  MMETSP1325-20131115|7696_1 39 AGLSKAEVDAYVAKV 53
                59*********9855 PP

>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0003      0.81      21      45 ..       9      33 ..       2      40 .. 0.87
   2 ?    3.9   0.0     0.015        42      21      37 ..      41      57 .]      35      57 .] 0.92

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0003
   PF06698.6 21 LSveELeeRIalLqaEIaRleaala 45
                LS  E ++++a  +aE++ + +a+ 
  MMETSP1325-20131115|7696_1  9 LSKAEVDAYVAKVKAEVDAIAKARV 33
                999***************9998875 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.015
   PF06698.6 21 LSveELeeRIalLqaEI 37
                LS  E ++++a  +aE+
  MMETSP1325-20131115|7696_1 41 LSKAEVDAYVAKVKAEV 57
                8999***********96 PP

>> PF13250.1  Domain of unknown function (DUF4041)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1    0.0011         3       9      20 ..      12      23 ..      11      34 .. 0.88
   2 ?    6.7   0.1    0.0017       4.7       9      20 ..      44      55 ..      43      56 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0011
   PF13250.1  9 gEcDaaiakvky 20
                +E+Da++akvk+
  MMETSP1325-20131115|7696_1 12 AEVDAYVAKVKA 23
                7*********98 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0017
   PF13250.1  9 gEcDaaiakvky 20
                +E+Da++akvk+
  MMETSP1325-20131115|7696_1 44 AEVDAYVAKVKA 55
                7*********97 PP

>> PF07821.7  Alpha-amylase C-terminal beta-sheet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.4    0.0028       7.7      14      29 ..      10      25 ..       6      33 .. 0.87
   2 ?    7.3   0.2    0.0014       3.8      10      27 ..      38      55 ..      29      57 .] 0.75

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0028
   PF07821.7 14 eaadadlYaAiidekv 29
                 +a+ d+Y+A++  +v
  MMETSP1325-20131115|7696_1 10 SKAEVDAYVAKVKAEV 25
                589********98755 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0014
   PF07821.7 10 avkIeaadadlYaAiide 27
                +    +a+ d+Y+A++  
  MMETSP1325-20131115|7696_1 38 TAGLSKAEVDAYVAKVKA 55
                555689*********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.29u 0.45s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 210.14
//
Query:       MMETSP1325-20131115|7698_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.64
# Mc/sec: 250.87
//
Query:       MMETSP1325-20131115|7699_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-09   35.1   0.0    2.5e-08   33.5   0.0    1.8  1  PF07679.11 Immunoglobulin I-set domain
    6.6e-06   26.0   0.0    8.2e-06   25.7   0.0    1.1  1  PF13895.1  Immunoglobulin domain
    1.2e-05   25.6   0.0    1.7e-05   25.1   0.0    1.2  1  PF13927.1  Immunoglobulin domain
    0.00023   21.0   0.0     0.0004   20.3   0.0    1.5  1  PF00047.20 Immunoglobulin domain


Domain annotation for each model (and alignments):
>> PF07679.11  Immunoglobulin I-set domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   7.4e-12   2.5e-08       4      82 ..      25      94 ..      22     103 .. 0.85

  Alignments for each domain:
  == domain 1    score: 33.5 bits;  conditional E-value: 7.4e-12
                EES-SEEEEE----EEEEEEEE-SSS-EEEEEETTEB-STBTTCEEEEETTEEEEEETT--GGG---EEEEEE----EE CS
  PF07679.11  4 tqklkdvevseGesvelectveGepepsvsWakdgselkssqrvkvtveeaeytLtIsnveksDeGkYtckatnsagka 82
                t    +  v+eG s+ l  t++G+p+++ +W+ +g +++           +++ L+++n++k+ +G+Ytc ++n agka
  MMETSP1325-20131115|7699_1 25 TNYHGKNDVMEGASLVLMATARGVPQLDYQWVFNGMPIEG---------AKTKILELHNIQKAQAGTYTCFVENIAGKA 94
                555566789******************************6.........2345799*******************9885 PP

>> PF13895.1  Immunoglobulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   2.4e-09   8.2e-06      10      66 ..      32      89 ..      21     102 .. 0.83

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 2.4e-09
   PF13895.1 10 vvtegenvtLtCsapgnptprvqwykdgvels.qsqnqlfipnvsaedsgtYtCrarn 66
                 v eg +++L  +a g p  ++qw  +g +++  ++++l ++n++  ++gtYtC + n
  MMETSP1325-20131115|7699_1 32 DVMEGASLVLMATARGVPQLDYQWVFNGMPIEgAKTKILELHNIQKAQAGTYTCFVEN 89
                478999999999********************6444434469************8877 PP

>> PF13927.1  Immunoglobulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   4.9e-09   1.7e-05       7      75 .]      27      89 ..      21      89 .. 0.84

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 4.9e-09
   PF13927.1  7 spsptvtsggn.vtLtCsaeggpppptisWyietppelqgsegssssestLtissvtsedsgtYtCvasN 75
                 ++   + +g  + L  +a+g p    ++W       ++g    +   ++L +++ + ++ gtYtC ++N
  MMETSP1325-20131115|7699_1 27 YHGKNDVMEGAsLVLMATARGVP-QLDYQWV------FNGMPIEGAKTKILELHNIQKAQAGTYTCFVEN 89
                44444444444599999******.*******......******************************998 PP

>> PF00047.20  Immunoglobulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.2e-07    0.0004       4      64 .]      39      87 ..      36      87 .. 0.85

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.2e-07
                EEEEEEEEE...SS-EEEEETTCS-SCEEEEEEEEECSCEEEEEEESSS-CCC---EEEEE CS
  PF00047.20  4 vtLtCsvssgppstdvsWykegkgleesqktgvvenrvsaqevLtinnvtkedsGtYtCvv 64
                + L  ++  g p+ d++W ++g + e   kt+           L++ n +k  +GtYtC v
  MMETSP1325-20131115|7699_1 39 LVLMATA-RGVPQLDYQWVFNGMPIEGA-KTKI----------LELHNIQKAQAGTYTCFV 87
                5556667.899************98877.6676..........****************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 488.15
//
Query:       MMETSP1325-20131115|7700_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|7704_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 291.92
//
Query:       MMETSP1325-20131115|7705_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.55
# Mc/sec: 217.85
//
Query:       MMETSP1325-20131115|7701_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-25   89.3   0.0    2.1e-25   89.0   0.0    1.0  1  PF03283.8 Pectinacetylesterase


Domain annotation for each model (and alignments):
>> PF03283.8  Pectinacetylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   0.0   1.5e-29   2.1e-25     143     343 ..       1     208 [.       1     218 [. 0.81

  Alignments for each domain:
  == domain 1    score: 89.0 bits;  conditional E-value: 1.5e-29
   PF03283.8 143 avideLlkk.glkkakqviLsGcSAGGlaallhvdkfrellpktvkvkclsdaGffldvkdvsgeeslesvy.....sevvklqnvekslpesctsklept....CffpqnllkqiktPvFivnsayDswqlqellapksgswkeckldlqecsssqlqflqgfrkemlealkev..snskkaGlFinsClaHcqserqetwlskdspvvkgk 343
                 a++ +L +  gl++  +++ sG+SAGG +a+++ d +  + p+ vkv +l d+G++ld+  ++   s + +      +++++   + k  + +c +    +    C+++ + +++++tP  +  ++yD wql++ +      ++ +++     ++++l+++++f+ +++ +  ++  + s++a+++ ++C+ H  se+ + w++ +s +v + 
  MMETSP1325-20131115|7701_1   1 AMMRDLSATqGLAEGATLLFSGGSAGGRGAMAWLDVIPRMVPQGVKVLGLLDSGYYLDIDPYTSDFSPDFMVetsliTNTMNGTALVKAASPECEAAYPGEqiwkCMYGTYRMPFVTTPYLMTAAQYDGWQLSHDVH----AYAGIES-SPVYTDEELAYVNTFGARTQAMATTLpsQLSTSASIYSPACYNHHISEQPNFWKTATSDNVTQY 208
                 68999*9999***********************************************9866654433333334345666776666666777767555544489******************************9988....3334444.45678999*******99999888888756788899******************99987666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1140.67
//
Query:       MMETSP1325-20131115|7706_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 321.21
//
Query:       MMETSP1325-20131115|7708_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 366.50
//
Query:       MMETSP1325-20131115|7709_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-08   34.9   0.0      1e-08   34.9   0.0    1.0  1  PF03007.11 Wax ester synthase-like Acyl-CoA acyltransferase domain
    0.00025   19.8   0.2    0.00031   19.5   0.1    1.1  1  PF00668.15 Condensation domain
  ------ inclusion threshold ------
      0.038   12.4   0.0      0.041   12.3   0.0    1.1  1  PF07247.7  Alcohol acetyltransferase


Domain annotation for each model (and alignments):
>> PF03007.11  Wax ester synthase-like Acyl-CoA acyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.0   2.3e-12     1e-08     102     170 ..       4      72 ..       1      93 [. 0.91

  Alignments for each domain:
  == domain 1    score: 34.9 bits;  conditional E-value: 2.3e-12
  PF03007.11 102 srlasrpLDrsRPLWevhviEGleggriAillkvHHAliDGvgglkllarlldldpdpaprpevpqvpp 170
                 + + + p+D sRP+We +++     g   ++++vHH + DGv+ ++ll++ll +d  ++++++++ +p 
  MMETSP1325-20131115|7709_1   4 GTVVALPIDFSRPMWEWTLLSKPSTGEHVLVFRVHHVIGDGVALMTLLNHLLGKDSMNPTFKRKHIIPV 72 
                 567789*****************************************************9999998776 PP

>> PF00668.15  Condensation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   6.8e-08   0.00031     114     152 ..      15      54 ..       9      56 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 6.8e-08
                 S-SEEEEEEEEETT.EEEEEEEEEGGG--------HHHHH CS
  PF00668.15 114 gplfrvalfkteed.rvlllfsvHHlivDgvSlrilledl 152
                 +p+++  l+   ++ +++l+f+vHH+i Dgv l  ll++l
  MMETSP1325-20131115|7709_1  15 RPMWEWTLLSKPSTgEHVLVFRVHHVIGDGVALMTLLNHL 54 
                 688888888888888*********************9988 PP

>> PF07247.7  Alcohol acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   9.1e-06     0.041     110     161 ..       5      55 ..       1      67 [. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 9.1e-06
   PF07247.7 110 nltisvlnetkPlwrlivleekgankkkklvfitdHtlfDGlsavnffkdLl 161
                  ++    +  +P w   +l  k + ++  lvf + H++ DG++ + +++ Ll
  MMETSP1325-20131115|7709_1   5 TVVALPIDFSRPMWEWTLL-SKPSTGEHVLVFRVHHVIGDGVALMTLLNHLL 55 
                 5666777889*********.888999****************9999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 464.89
//
Query:       MMETSP1325-20131115|7710_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|7703_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2459  (0.179857); expected 273.4 (0.02)
Passed bias filter:                      585  (0.0427882); expected 273.4 (0.02)
Passed Vit filter:                       212  (0.0155061); expected 13.7 (0.001)
Passed Fwd filter:                        96  (0.00702165); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 3.06u 0.44s 00:00:03.50 Elapsed: 00:00:01.50
# Mc/sec: 554.36
//
Query:       MMETSP1325-20131115|7711_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 369.04
//
Query:       MMETSP1325-20131115|7715_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 774.99
//
Query:       MMETSP1325-20131115|7716_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00063   19.4   0.5      0.072   13.0   0.0    3.1  3  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
      0.015   14.7   0.0      0.025   14.0   0.0    1.4  1  PF12799.2  Leucine Rich repeats (2 copies)
      0.017   13.6   0.0      0.023   13.2   0.0    1.1  1  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       0.3   1.4e+03      12      23 ..       3      14 ..       2      15 .. 0.83
   2 !   13.0   0.0   1.6e-05     0.072       1      18 [.      20      37 ..      20      48 .. 0.90
   3 ?    2.8   0.0     0.033   1.5e+02       9      22 ..      63      76 ..      61      85 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.3
   PF13516.1 12 NqigdeGlsaLa 23
                + ig+  ++ +a
  MMETSP1325-20131115|7716_1  3 CEIGNTIVKQIA 14
                889999999887 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.6e-05
   PF13516.1  1 lknLtsLdLsnNqigdeG 18
                +k++++L+L +N ig+ G
  MMETSP1325-20131115|7716_1 20 CKKIRNLHLDHNRIGSYG 37
                99*************987 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.033
   PF13516.1  9 LsnNqigdeGlsaL 22
                L  N++g e++++L
  MMETSP1325-20131115|7716_1 63 LDENPLGAEFMMSL 76
                678******99998 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   5.5e-06     0.025      10      38 ..       7      35 ..       4      47 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.5e-06
   PF12799.2 10 nNnIkdlppelanLpnLktLnLsnNpisd 38
                n+ +k++ + +  +++ ++L+L++N+i +
  MMETSP1325-20131115|7716_1  7 NTIVKQIAARIPECKKIRNLHLDHNRIGS 35
                5556788888999**************76 PP

>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     5e-06     0.023      31      77 ..       6      52 ..       4      54 .. 0.97

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5e-06
  PF00118.19 31 gatilkelelqhpvakllveaaksqdeevGDGtttaviLageLleea 77
                g+ti+k++    p +k ++++   +++  + G +++++++ +++++a
  MMETSP1325-20131115|7716_1  6 GNTIVKQIAARIPECKKIRNLHLDHNRIGSYGGNSVLVIIKAMIKNA 52
                9********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 459.30
//
Query:       MMETSP1325-20131115|7717_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   13.8   0.7      0.014   13.8   0.5    1.0  1  PF02994.9 L1 transposable element
      0.053   13.5   0.3      0.053   13.5   0.2    1.1  1  PF08702.5 Fibrinogen alpha/beta chain family
       0.23    8.6   3.9       0.25    8.5   2.7    1.0  1  PF12128.3 Protein of unknown function (DUF3584)


Domain annotation for each model (and alignments):
>> PF02994.9  L1 transposable element
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.5     3e-06     0.014     140     188 ..      10      58 ..       2      64 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3e-06
                 ....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF02994.9 140 lsisnriqeleerisgaedsieeikstvkenekrkklleqniqeiqdsv 188
                 +++ + i+ +ee + +ae + e++ks +++ e  k   + ++ eiq sv
  MMETSP1325-20131115|7717_1  10 ITFDAHINAMEEALNAAEREHEDVKSLMRQLEAGKTKAVLDLHEIQRSV 58 
                 678899****************************************887 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   1.2e-05     0.053      26      65 ..       4      43 ..       1      64 [. 0.83

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.2e-05
                CHCCCCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHH CS
   PF08702.5 26 lldkyekdvdkkieklenlLeqlanktkeieelvksikes 65
                 l+k + ++d +i+ +e+ L+ ++++++++++l+++++  
  MMETSP1325-20131115|7717_1  4 RLQKNQITFDAHINAMEEALNAAEREHEDVKSLMRQLEAG 43
                5899999**************************9998764 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.7   5.5e-05      0.25     468     523 ..       6      61 ..       3      65 .] 0.88

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 5.5e-05
   PF12128.3 468 leqleaadealekaqeelekaeaevealqseeeqlrkkrdealealqkaerrleel 523
                  +++ ++d+++++++e+l++ae e+e+ +s  +ql++ + +a   l++++r++   
  MMETSP1325-20131115|7717_1   6 QKNQITFDAHINAMEEALNAAEREHEDVKSLMRQLEAGKTKAVLDLHEIQRSVAVE 61 
                 5678899***********************************99999999987644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       931  (0.0680954); expected 273.4 (0.02)
Passed bias filter:                      722  (0.0528087); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 338.62
//
Query:       MMETSP1325-20131115|7714_1  [L=475]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-79  265.1   0.0    6.6e-79  264.6   0.0    1.1  1  PF00928.16 Adaptor complexes medium subunit family
    2.8e-05   23.7   0.0    4.6e-05   23.0   0.0    1.3  1  PF01217.15 Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> PF00928.16  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.6   0.0   9.6e-83   6.6e-79       1     249 [.     164     423 ..     164     432 .. 0.98

  Alignments for each domain:
  == domain 1    score: 264.6 bits;  conditional E-value: 9.6e-83
                 -------------EEEEEEEEEEEEEE-----EEEEEEE-EEEEEE------EEEE---SS-B-..............-----B-SEEEEETT-B-TTHHHH--EEE------EEEEEEEB-S-S--SEEEEEEEE.-----EEEEEEEEE-S-TT--BEEEEEEE------EEEEE--STTEEEE---..-EEEEE--B--.......-EE---EEEE----------EEEEEEEET-----------EEE--------EEE CS
  PF00928.16   1 vpwrpsgikykknevyldviEkvsvlvdkdgkllnsevqGtialkskLsGmpevklsLndelni..............ekkgielddvsfHpcVrlskfeservisFiPpdgefeLmrYrvseesklplklecqvkeeskgrievnvklesqlkrklslenvkitiplPkevskpvlkvsdGkakydseenvleWsikklpgekehalsgelelsaeqekeekdrekppvsveFsipgataSglkVrslkvsekkenvkpykw 249
                 v wr++g +y+knevy+dv+E+v++l+  +g++l+ e  G++ +k +LsGmpe+k++Lnd+ln+              +++++e+dd++fH+cVrl kf+ser+i+FiPpdgefeLmrYrvs+++klp++l + ++ee k+++++nvk+ +q+ ++ s+++v++++p+P ++ + ++kv +G+ak+++++++++W+ik++pg+ e++l++e+ l +++   +k +++pp+s +F+++++t Sg  Vr+l+v+  k+++   +w
  MMETSP1325-20131115|7714_1 164 VDWRREGLRYRKNEVYIDVLESVNLLMGANGNILRNECSGQVVMKTQLSGMPECKFALNDKLNMdreaasgkqsaedkKRRTVEIDDCTFHRCVRLGKFDSERTITFIPPDGEFELMRYRVSDNIKLPFRLIPAIQEEGKSKVTFNVKVTAQFDPDKSATDVVVKVPVPPNTARTNIKVGAGRAKFEPDQKAIVWRIKRFPGGAEFMLQAEVDLMQTTR--AKAWSRPPISFSFNVSMFTSSGVYVRYLRVYD-KSGYHANRW 423
                 57********************************************************************************************************************************************************************************************************************99999..778**************************998.688877666 PP

>> PF01217.15  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   6.7e-09   4.6e-05       1     122 [.       4     125 ..       4     139 .. 0.80

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 6.7e-09
                 -EEEEEEE-----EEEEEES.S---HHHHHHHHHHHHHHHHTS-SSS-SEEEETT.EEEEEEEETTEEEEEEE-----HHHHHHHHHHHHHHHHHH--.---HHHHHHHHHHHHHHHHTTB---- CS
  PF01217.15   1 mikaililnkkgkvrlakfy.tavddkkkqklieevyelvsaRdsklsniveled.lkviYkryasLYFvvivdeqeneliilelihlfvesLdkyfg.nVceldlvfnfekvylildEivsgGe 122
                 mi  ++i+n kg++ + +fy + v++        +v++ +    + ++  v++ d    +Y r  s+Y v +  ++ n  +++e + +++  L  y+g +  e  +  n+  +y +ldE ++ G 
  MMETSP1325-20131115|7714_1   4 MISGLMIVNVKGEPVISRFYrDDVSKATADAFGLKVIASKE---TGTAPPVKIVDgASFLYCRHGSMYLVAVTRSNVNPALVFEFLFNWIRILKSYLGdDFDEDKIKNNMTLLYELLDETMDFGY 125
                 67889***************555555444444445555444...44444444444388****************************************77888888899**********998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.35s 00:00:01.12 Elapsed: 00:00:00.54
# Mc/sec: 2107.91
//
Query:       MMETSP1325-20131115|7721_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-24   84.9   0.0    5.2e-24   84.6   0.0    1.0  1  PF00378.15 Enoyl-CoA hydratase/isomerase family


Domain annotation for each model (and alignments):
>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.6   0.0   3.8e-28   5.2e-24      78     228 ..      32     180 ..      18     185 .. 0.92

  Alignments for each domain:
  == domain 1    score: 84.6 bits;  conditional E-value: 3.8e-28
                 HHHHHHHHHHT-SS--EEEE---B-----HHHHHSSEEEEETT-EE--CCCC-----------HHHHH---HHHHHHHH----EEHHHHHHTTSSSEEE-GCC---HHHHHHHHHH--S--SS-HHHHHHH..HHHH------------HC CS
  PF00378.15  78 eaqklvekledlekpvvAavnGaalGGGlelalacdyriaadeakfglpevklGilpgaggtqrlprlvGvsaAlemiltgrriradeAlkvGlvdkvvpeeelveeaielakrladkpklalallkkamraalekalsevrkqelklypa 228
                  aq++  + ++l++pv+A   G++ GGGl++al +d+r  + + +f+  e+k G++p++ g+++l  l+  + A+e+++t+r + + +A++ Glv+ v ++    e a++la++++  +++ +a +k  ++a+ +  ++++++ e + +++
  MMETSP1325-20131115|7721_1  32 LAQEVAWAWRQLPVPVLAVTHGICYGGGLQIALGADFRFSTPDCSFSIMEAKWGLVPDMSGSVLLRELISIDLAKELTMTARVFDGTKAKEYGLVSHVSETPY--EDAVALANEIITRSPHCVAGTKLLFNATWDAPEARALELETEIQTK 180
                 56777778899**************************************************************************************988877..***************************9999999999988776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1123.29
//
Query:       MMETSP1325-20131115|7722_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       547  (0.0400088); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.68
# Mc/sec: 267.83
//
Query:       MMETSP1325-20131115|7724_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.55
# Mc/sec: 139.42
//
Query:       MMETSP1325-20131115|7723_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 668.98
//
Query:       MMETSP1325-20131115|7725_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 216.14
//
Query:       MMETSP1325-20131115|7718_1  [L=706]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.98u 0.33s 00:00:01.31 Elapsed: 00:00:00.61
# Mc/sec: 2773.49
//
Query:       MMETSP1325-20131115|7727_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00023   20.6   0.1       0.51   10.1   0.0    2.4  2  PF00023.25 Ankyrin repeat
    0.00076   19.6   0.1    0.00095   19.3   0.1    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
     0.0058   17.0   0.0     0.0084   16.5   0.0    1.3  1  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00033       1.5      14      33 .]      10      29 ..       2      29 .. 0.87
   2 !   10.1   0.0   0.00011      0.51       1      13 [.      30      42 ..      30      62 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00033
                HHHHHHHHHHTTSSTTHBHT CS
  PF00023.25 14 nlevvklLlsqGAdlnaqdd 33
                ++e+v +Ll +GA  n+ ++
  MMETSP1325-20131115|7727_1 10 GAEMVGMLLAAGAKANMPTK 29
                799***********999875 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00011
                TSCBHHHHHHHTT CS
  PF00023.25  1 dGfTPLHlAalrg 13
                dG  PLHlAa+ +
  MMETSP1325-20131115|7727_1 30 DGIIPLHLAAIQD 42
                8999******876 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.1   2.1e-07   0.00095      40      81 ..      12      52 ..       6      65 .. 0.58

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 2.1e-07
   PF12796.2 40 eivklLleagadvnakdkegntpLhlAvrnghlelvklLlek 81
                e+v +Ll+aga  n  +k+g  pLhlA+  ++le++klL  +
  MMETSP1325-20131115|7727_1 12 EMVGMLLAAGAKANMPTKDGIIPLHLAAI-QDLEACKLLTAQ 52
                56666666666666666666666666664.335555555433 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.8e-06    0.0084      15      53 ..      12      49 ..       6      50 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.8e-06
   PF13637.1 15 elvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                e+v  Ll+ g+  n+  ++G  +Lh+Aa  +++e++klL
  MMETSP1325-20131115|7727_1 12 EMVGMLLAAGAKANMPTKDGIIPLHLAAI-QDLEACKLL 49
                688899*********************87.799999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 324.21
//
Query:       MMETSP1325-20131115|7720_1  [L=391]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-94  317.1   1.4    2.2e-94  316.2   1.0    1.4  1  PF00503.15 G-protein alpha subunit
    4.1e-13   48.8   0.8    7.4e-08   31.7   0.0    2.4  2  PF00025.16 ADP-ribosylation factor family
    8.4e-06   24.9   0.1      0.012   14.7   0.0    2.3  2  PF04670.7  Gtr1/RagA G protein conserved region
    5.1e-05   23.6   0.7      0.029   14.7   0.0    2.7  3  PF08477.8  Miro-like protein
  ------ inclusion threshold ------
      0.043   13.1   0.0      0.065   12.6   0.0    1.3  1  PF11227.3  Protein of unknown function (DUF3025)
       0.11   11.9   0.0       0.23   10.9   0.0    1.5  1  PF13555.1  P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  316.2   1.0   9.7e-98   2.2e-94      31     387 ..       9     388 ..       4     390 .. 0.88

  Alignments for each domain:
  == domain 1    score: 316.2 bits;  conditional E-value: 9.7e-98
                 ..--TTT---XXXXXXXXXXXXXXXXXEEEEEEEXXXXXXXHHHHHHHHHHHXXXXXXX.XHHHHHHHHHHHHHHHHHHHHXXXHHHHHHXSS...XHHHHHXXXHHHHXXXXXSSXX..XXHHHHXXXCTCHHXHHHHHHHTXXXXSXXXTTHHHHHTTHHHHHSTTXXXXHHHHHHXXXXXXXXEEEEEXX.XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEGGGTTXBXSSXTTSBHHHHHHHHHHHHHTXGGGSSXEEEEEEEXHHHHHHHTTTSXGGSGGGTTXX.......................XX..HHHHHHHHHHHHHHHHHHHHTXXG..SXEEEEEXXTTXHHHHHHHHHHHHHHHHHHHHHCXX CS
  PF00503.15  31 seeekkrsslnddiskkleeekkkkkkevklLlLGqgeSGKsTilkqfkllykpgfsre.eraswraviylnivrsiktilealekleielsls.kseeneeqleklksrldpldeiealvleelaedikelwndpgvqevlerrrkikledsaeyFldnleriaspdYvPtddDilrarlkttGiseikfevesktefrlvDvGGqrserkkWipcfedvdaiiFlvslsefdqvlyedesvnrleeSlklFksicnnkllkntpiiLflNKlDileeKlkkgpklskyfpsye.......................gdrendyesaskylrnkfkeinrensen..rkiythftsatdtenvrkvfaavrdiilrenlkksg 387
                 s ee+++++++++i+ ++ +++  ++k++klLlLG+geSGK+T+lkq++++y++gf +e  r +w + i  n+v ++k++++a+e le   +   k+e +++q+++ ++    l   e l l e+   ik lwndpg+q++ e+r+++++ +s+  ++++++ +++pdY+P+++D+l +r +t+Gi  +  e+ +k+ef+++DvGGqr+er+kWi+cf++v+a+iF+++lse+dq+l+ed+s+nr+ e++++F++  ++ ++k + +iLflN +   +    k + ++++ ++ +                        + ++  ++ ++y+ +kf+e+ +e++++    +yth+t+at+t+nvrk+f+ ++d+il+ +l +sg
  MMETSP1325-20131115|7720_1   9 SDEERAAQERSRQIDAQNARDHDTEQKKIKLLLLGAGESGKTTVLKQMQIIYGKGFAEEeLRLQWAPRINENVVAAMKALCDAVEDLELMDQVVhKDEFDSFQSNEAMNGVGLLSP-E-LSLSEIGPLIKILWNDPGIQSAWEKRSEFQIIESHVKYFEKIDAMSEPDYTPSEEDVLLCRSRTIGIVKTVLEI-DKNEFNIFDVGGQRNERRKWIHCFDEVTAVIFVAALSEYDQTLFEDSSQNRMVEAIEIFREHSTSSWFKGSALILFLNXKRPVQGETGKKKPIASVEEWSDydgpdyvmnpladgqapdaevelQQ-QEAFDQGKDYFLKKFLELPEEKQTErsSDVYTHVTCATNTDNVRKIFDVCKDVILKGSLIDSG 388
                 678999999************************************************774689**********************9986554334333333333333332222222.2.28999*********************************************************************.9*****************************************************************************7766665555544355554444477********************644.589***************9999777899*****************************999887 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   3.7e-06    0.0084      10      35 ..      32      57 ..      25      62 .. 0.89
   2 !   31.7   0.0   3.2e-11   7.4e-08      45      93 ..     189     237 ..     179     280 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 3.7e-06
                -.TSEEEEEEE--TT---HHHHHHHH CS
  PF00025.16 10 lkkkelrilllGLDnaGKtTilkklk 35
                +++k++++lllG  ++GKtT+lk+++
  MMETSP1325-20131115|7720_1 32 TEQKKIKLLLLGAGESGKTTVLKQMQ 57
                5689*******************987 PP

  == domain 2    score: 31.7 bits;  conditional E-value: 3.2e-11
                 --S-EEEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT- CS
  PF00025.16  45 TigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsad 93 
                 Tig     lei + +f+++DvGGq++ R+ W + f++++avifv   ++
  MMETSP1325-20131115|7720_1 189 TIGIVKTVLEIDKNEFNIFDVGGQRNERRKWIHCFDEVTAVIFVAALSE 237
                 8888888899*********************************976543 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   5.1e-06     0.012       1      69 [.      38     105 ..      38     121 .. 0.73
   2 !    8.1   0.0   0.00053       1.2      45      89 ..     199     238 ..     182     267 .. 0.67

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 5.1e-06
   PF04670.7   1 klLLmGksgsGKtSmrs...iiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrq 69 
                 klLL+G ++sGKt++ +   ii+ +  a++ lrL+   +++++ v  ++ l+  + D+    e++++ ++++
  MMETSP1325-20131115|7720_1  38 KLLLLGAGESGKTTVLKqmqIIYGKGFAEEELRLQWAPRINENVVAAMKALCDAVEDL----ELMDQVVHKD 105
                 89************9643449************************9998775444443....3333333333 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00053
   PF04670.7  45 lgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesr 89 
                  ++ ++n+ D+gGq +   +       + f +v ++i+V   +  
  MMETSP1325-20131115|7720_1 199 IDKNEFNIFDVGGQRNERRK-----WIHCFDEVTAVIFVAALSEY 238
                 445689********887766.....479***********877732 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0043       9.7       1      19 [.      38      56 ..      38      69 .. 0.92
   2 !   14.7   0.0   1.3e-05     0.029      35      87 ..     187     239 ..     170     253 .. 0.89
   3 ?   -3.6   0.0         6   1.4e+04      30      42 ..     344     356 ..     331     374 .. 0.44

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0043
   PF08477.8  1 kvvvvGdkgvGKssllsql 19
                k++++G  ++GK++ l+q+
  MMETSP1325-20131115|7720_1 38 KLLLLGAGESGKTTVLKQM 56
                7899************997 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 1.3e-05
   PF08477.8  35 gdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdee 87 
                 + t+++ ++++++d++ ++++d+gg+ +  ++ ++ + +++a+++v +l++++
  MMETSP1325-20131115|7720_1 187 SRTIGIVKTVLEIDKNEFNIFDVGGQRNERRKWIHCFDEVTAVIFVAALSEYD 239
                 67899999******************9888888899***********999876 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 6
   PF08477.8  30 peeikgdtlavkt 42 
                 pee ++++ ++ +
  MMETSP1325-20131115|7720_1 344 PEEKQTERSSDVY 356
                 3333333333322 PP

>> PF11227.3  Protein of unknown function (DUF3025)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.8e-05     0.065      54     150 ..     199     299 ..     192     357 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.8e-05
   PF11227.3  54 lhaaeiaregvkaeRgklRdalTlfDEn.gvlllsadaklaelLrdheWkelfverRaeweeqvavlif.GHalle..klvkpykgltakalvveveeela 150
                 +  +e++  +v+ +R ++R  +  fDE  +v+++ a ++  ++L + + ++ +ve+ + ++e+ +   f G al+   +  +p +g t+k   ++  ee++
  MMETSP1325-20131115|7720_1 199 IDKNEFNIFDVGGQRNERRKWIHCFDEVtAVIFVAALSEYDQTLFEDSSQNRMVEAIEIFREHSTSSWFkGSALILflNXKRPVQGETGKKKPIASVEEWS 299
                 566788889999***************62677788889999**************9999986655544438887651144578888888877766666665 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0    0.0001      0.23      17      44 ..      30      57 ..      23      64 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.0001
   PF13555.1 17 veidpkgkntlltGasGsGKSTllDAiq 44
                 + ++k+ + ll Ga +sGK+T+l  +q
  MMETSP1325-20131115|7720_1 30 HDTEQKKIKLLLLGAGESGKTTVLKQMQ 57
                4445555579************996665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       568  (0.0415448); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.76u 0.38s 00:00:01.14 Elapsed: 00:00:00.51
# Mc/sec: 1837.21
//
Query:       MMETSP1325-20131115|7728_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 397.80
//
Query:       MMETSP1325-20131115|7730_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 224.66
//
Query:       MMETSP1325-20131115|7732_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|7733_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-53  179.7   0.0    5.8e-53  179.5   0.0    1.0  1  PF01267.12 F-actin capping protein alpha subunit
  ------ inclusion threshold ------
      0.049   13.3   0.3       0.13   12.0   0.1    1.8  2  PF12888.2  Lipid-binding putative hydrolase
      0.085   12.7   0.0       0.17   11.7   0.0    1.5  1  PF12939.2  Domain of unknown function (DUF3837)


Domain annotation for each model (and alignments):
>> PF01267.12  F-actin capping protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.5   0.0   1.3e-56   5.8e-53      24     265 ..       2     239 ..       1     245 [. 0.90

  Alignments for each domain:
  == domain 1    score: 179.5 bits;  conditional E-value: 1.3e-56
  PF01267.12  24 dlrtllnddqslksavaealeeyneeqlvvielpeldekviiskanklenerYldpkskksfafDhlkqtvs..dvesye.leeeeletfraelekkleaYvkehy..psgvlsvlpeeeeeektlaiiivgnrynpsnFwtGrwrseytvdeqast.klkGsikvqvHYyEdGNVqlktnkevsesvsesneqslasqivkaIsklenkyqlelnesynelnekafkaLRRqLPvtrqKvdWdkvln 265
                 d+++ll      ++ +a   +eyn++++ ++     d+kv i+ka + + + Y+dp+s +++ ++h++  v   d+++++   e  le+ ra+le+ l++Y+ ++y  +++ +sv+++  e    l+++i ++++n+ nFw+G+w s++tv+++a+  +++G+ikv++HY+EdGNVql+t+k +++    +      +++ + I++ e+ +q  l+e+y+ + e++fka+RR +Pv r+Kv W+  ++
  MMETSP1325-20131115|7733_1   2 DVKNLLPAGLISEPMLAGMAREYNTKNMKMVPNG--DSKVHICKAAETDATHYIDPRSGQVIGVNHVTASVLedDIQPATgPMEPALEEQRAALEQMLSDYIADQYydDTALCSVYAKGAE----LTVVISAEKLNLRNFWSGQWISTWTVKVEAAAmSVTGEIKVRAHYFEDGNVQLQTKKAIETASIPPG---GMEAVRDHIATEEKIVQDGLEEMYTGMTEETFKAMRRVMPVHRNKVSWNI-NE 239
                 7888888888888999999************655..599*******************************964489999989999*****************9999877788999999999....9**************************955556**************************99555444...6888999*****************************************84.55 PP

>> PF12888.2  Lipid-binding putative hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.54   2.5e+03      55      63 ..      34      42 ..      20      74 .. 0.50
   2 ?   12.0   0.1   2.8e-05      0.13      27     103 ..     137     214 ..     115     222 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.54
   PF12888.2 55 sadskvkit 63
                ++dskv+i 
  MMETSP1325-20131115|7733_1 34 NGDSKVHIC 42
                444444443 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 2.8e-05
   PF12888.2  27 tnlwevkikvkvdlaartFsatg.lanelsadskvkitdGkvlegaattpsgmka..DsivylvefdddedGktykvaGf 103
                 ++ w +   vkv+ aa++ +++  +  ++  d +v+++  k +e a + p+gm+a  D i    e +  +dG++  ++G 
  MMETSP1325-20131115|7733_1 137 SGQWISTWTVKVEAAAMSVTGEIkVRAHYFEDGNVQLQTKKAIETASIPPGGMEAvrDHI--ATEEKIVQDGLEEMYTGM 214
                 567889999***********99779999*************************9833444..667677777777777766 PP

>> PF12939.2  Domain of unknown function (DUF3837)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.8e-05      0.17      48      89 ..      67     109 ..      58     120 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.8e-05
   PF12939.2  48 ellelkeklekeldklepa.dekekklillLkdyepddttDeq 89 
                 +   l + +++  +++epa +e+ + l ++L dy+ d+ +D+ 
  MMETSP1325-20131115|7733_1  67 TASVLEDDIQPATGPMEPAlEEQRAALEQMLSDYIADQYYDDT 109
                 55668999*********98588999***************964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       483  (0.0353277); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 1336.63
//
Query:       MMETSP1325-20131115|7735_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 562.41
//
Query:       MMETSP1325-20131115|7736_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 629.04
//
Query:       MMETSP1325-20131115|7737_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   10.9   7.7       0.11   11.0   5.4    1.0  1  PF10446.4  Protein of unknown function (DUF2457)
       0.68    8.6   3.8        0.7    8.6   2.6    1.1  1  PF05097.7  Protein of unknown function (DUF688)
       0.94    8.8   6.8        1.1    8.6   4.7    1.1  1  PF03066.10 Nucleoplasmin
        1.3    8.1   6.5        1.2    8.1   4.5    1.1  1  PF06524.7  NOA36 protein
        3.5    7.4  16.6        3.8    7.3  11.5    1.1  1  PF10986.3  Protein of unknown function (DUF2796)
        4.9    6.8   8.0        5.6    6.6   5.5    1.1  1  PF08595.6  RXT2-like, N-terminal


Domain annotation for each model (and alignments):
>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   5.4   4.7e-05      0.11      59      80 ..      10      31 ..       4      54 .. 0.53

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 4.7e-05
   PF10446.4 59 deeddddeDeddddddddeDde 80
                +++d+dd+D++++ddddd+D++
  MMETSP1325-20131115|7737_1 10 NKDDHDDDDNHNHDDDDDDDHH 31
                2222222222222233322222 PP

>> PF05097.7  Protein of unknown function (DUF688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.6   0.00031       0.7     220     252 ..       9      44 ..       2      53 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00031
   PF05097.7 220 llnqdiddeeeedenddDe...vveseelskkgcGl 252
                 + ++d dd+++++++ddD+    +    l+ +g Gl
  MMETSP1325-20131115|7737_1   9 HNKDDHDDDDNHNHDDDDDddhHHHNVCLAHGGAGL 44 
                 445555555444444444334477777888888887 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   4.7   0.00047       1.1     113     134 ..       9      30 ..       2      38 .. 0.44

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00047
                 .....----XXXXXXXXXXXXX CS
  PF03066.10 113 esldeeddeedeeeeddeeddd 134
                 ++ d++dd+++++ +dd++dd+
  MMETSP1325-20131115|7737_1   9 HNKDDHDDDDNHNHDDDDDDDH 30 
                 3333333333333333333332 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.5   0.00055       1.2     272     301 ..       9      35 ..       2      50 .. 0.54

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00055
   PF06524.7 272 esdddeeesaedydeeededddddeeedet 301
                 ++ dd++++++++   +d+ddddd+++ + 
  MMETSP1325-20131115|7737_1   9 HNKDDHDDDDNHN---HDDDDDDDHHHHNV 35 
                 3334444444443...44444444444444 PP

>> PF10986.3  Protein of unknown function (DUF2796)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  11.5    0.0017       3.8      90     123 ..       9      50 ..       2      55 .. 0.41

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0017
   PF10986.3  90 hdhddhdhdhe..hdhdehddhd......eHsdfeaeyqfeC 123
                 h++ddhd+d++  hd+d++ddh+       H+      + +C
  MMETSP1325-20131115|7737_1   9 HNKDDHDDDDNhnHDDDDDDDHHhhnvclAHGGAGLGRSHSC 50 
                 333333322221133333333321222336665555555555 PP

>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.5    0.0025       5.6      59      87 ..       8      34 ..       2      39 .. 0.41

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0025
   PF08595.6 59 enelddededdeeeededeeeaeenplkk 87
                ++++dd+d+dd++++d  +++++++ +++
  MMETSP1325-20131115|7737_1  8 DHNKDDHDDDDNHNHD--DDDDDDHHHHN 34
                2333333333333333..33333444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|7738_1  [L=374]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-37  127.6   9.1    3.4e-37  127.6   6.3    1.5  2  PF02734.12 DAK2 domain
      4e-36  124.1   0.0      7e-36  123.3   0.0    1.3  1  PF02733.12 Dak1 domain


Domain annotation for each model (and alignments):
>> PF02734.12  DAK2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.91   6.2e+03      81     107 ..      94     120 ..      76     140 .. 0.66
   2 !  127.6   6.3   4.9e-41   3.4e-37       2     174 ..     209     372 ..     208     373 .. 0.96

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.91
  PF02734.12  81 eaaleaikavGkakpgdkTmlDvlrpa 107
                 + a++a++  + a++  +  +++l+ a
  MMETSP1325-20131115|7738_1  94 TLAVAALTGSTPARVYVGSFMTALEMA 120
                 344455555556666666666666655 PP

  == domain 2    score: 127.6 bits;  conditional E-value: 4.9e-41
  PF02734.12   2 vGDGDtGtnmargaeavlkaleeleeeadlaevlkaiakallskagGtsGvlysqflraaakalkekeeldaedlakaleaaleaikavGkakpgdkTmlDvlrpavealeaakdgedleealeaaakaaekgaeaTkellaklgrAsylgersl.gvvDpGAvglalileala 174
                 +GDGD+G++++rgae++l+ +++  + ++++++l+aia+ +  ++gGtsG+l+ +f+raa  +l+   e +a+d   a++a+++aik vG+a+ g +TmlD+l pa+ al + +        leaa++aae+gae+T +++  +gr+ y+  + l  v+DpGA ++a+ ++a+a
  MMETSP1325-20131115|7738_1 209 AGDGDCGITFQRGAEKILSSVDSY-PVSSAEATLEAIATDVSASMGGTSGALLEIFFRAARVHLRA--EGNAADYRGAFSAGANAIKDVGGADAGYRTMLDALLPAAAALVDGAP-------LEAAIAAAEEGAESTMKMEGLAGRSNYIRAELLaTVPDPGAKAIAIAMRAFA 372
                 8*********************99.***************************************55..4569****************************************766.......9********************************99************99986 PP

>> PF02733.12  Dak1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.3   0.0     1e-39     7e-36     169     323 ..       2     147 ..       1     149 [. 0.94

  Alignments for each domain:
  == domain 1    score: 123.3 bits;  conditional E-value: 1e-39
                 --EE--B------TT----SS---TTEEEE----------EEEE---.HHHHHHHHHHHHHH---EEEEE-------EEEEEEE------HHHH---HHHHHHHH.HH---EEEEEE----S--TT----EEEEEEE-HHHHHHHHS-EESSS-E CS
  PF02733.12 169 lvtigasldhctvPgakkeseelkedemelGlGiHnEpGikksslipsidelvaelletlldeedkdrayvklesgdevvllvNnlGgvsllelyaiaekvveqlaeeagikiervltGafvtsldgaGfsitllkadkatkkllkafektkals 323
                 ++t+g+++ +ctvPg + +++ l+ + +e+GlGiH+EpG+k+s+l p  delv+e++e + +     ra  kl +gd+v++lvNnlGg++++ely +a+k++ ++a+  g +++rv++G+f+t+l++aG+s++llk+d  + ++l+a ++++a+ 
  MMETSP1325-20131115|7738_1   2 VKTLGVAMTTCTVPGTAPSDR-LDSQTIEIGLGIHGEPGMKQSPLKP-CDELVDEMVEVINS-----RA--KLGAGDDVAVLVNNLGGTPTMELYLVARKATLAVAALTGSTPARVYVGSFMTALEMAGVSLSLLKLDPLLAARLDAATSAPAWP 147
                 689****************99.*************************.*********98833.....33..6899**********************************************************************9999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.75
# Mc/sec: 1194.98
//
Query:       MMETSP1325-20131115|7740_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0029   17.3   6.5     0.0034   17.2   4.5    1.1  1  PF07200.8 Modifier of rudimentary (Mod(r)) protein
  ------ inclusion threshold ------
      0.039   13.4   9.6      0.042   13.3   6.7    1.1  1  PF04156.9 IncA protein
       0.22    9.9   9.1       0.25    9.8   6.3    1.0  1  PF08317.6 Spc7 kinetochore protein
       0.32   11.2   5.1        0.7   10.1   0.8    2.2  2  PF04102.7 SlyX
       0.62    9.9   3.5       0.67    9.8   2.4    1.1  1  PF09551.5 Stage II sporulation protein R (spore_II_R)
       0.71    8.6   9.7        1.2    7.9   6.7    1.4  1  PF10186.4 UV radiation resistance protein and autophagy-related subunit 14
       0.75    9.7   6.4          1    9.3   4.4    1.2  1  PF08702.5 Fibrinogen alpha/beta chain family
       0.94    7.8   4.3       0.88    7.9   3.0    1.1  1  PF04375.9 HemX
        1.6    7.4   7.9        1.6    7.4   5.5    1.0  1  PF04111.7 Autophagy protein Apg6


Domain annotation for each model (and alignments):
>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   4.5   2.2e-06    0.0034      19      87 ..       7      75 ..       2      85 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.2e-06
                HHHHGGGGS--TTT---HHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF07200.8 19 leefvkeldqvqdlneekeellaqnesLaeenlekepqleelkaqlqdkleelkkleekyeekkqklde 87
                + ++++  + ++++++  e+++ + +  +++ +e +++++e ++q ++k  ++++l+e++++k   l +
  MMETSP1325-20131115|7740_1  7 QRKIIEGGSRLKQQQNLYEAVRSDRNLYSKNLIESQEEIAEMRRQFKIKNHQIEQLKEEIQTKDHSLVK 75
                455777778899999999999999999999999*****************************9988765 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   6.7   2.8e-05     0.042      89     158 ..       2      71 ..       1      86 [. 0.58

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.8e-05
   PF04156.9  89 qlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlke 158
                 q+s+l++++++  +rl+ ++  +e++++d+ l ++ l + +e++ + ++++k ++ +i++l eei+ +++
  MMETSP1325-20131115|7740_1   2 QISDLQRKIIEGGSRLKQQQNLYEAVRSDRNLYSKNLIESQEEIAEMRRQFKIKNHQIEQLKEEIQTKDH 71 
                 4555666666666666666666666666666666666666666666666666666666666655555444 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   6.3   0.00016      0.25     174     253 ..       2      80 ..       1      86 [. 0.74

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00016
   PF08317.6 174 linsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekk 253
                 +i+++  k+ e  ++lk++ +  ++++++ + ++++ +e  +ee++++  + + k++++e+l+ee+q++++++ + + + 
  MMETSP1325-20131115|7740_1   2 QISDLQRKIIEGGSRLKQQQNLYEAVRSDRNLYSKNLIE-SQEEIAEMRRQFKIKNHQIEQLKEEIQTKDHSLVKEHFNH 80 
                 577888888888888888888888888877777776665.4888888888888888888888888888888776665555 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1     0.077   1.2e+02      33      56 ..       2      24 ..       1      33 [. 0.77
   2 ?   10.1   0.8   0.00046       0.7      25      57 ..      36      68 ..      34      76 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.077
   PF04102.7 33 eidrlqrqlrllaerlkeleessn 56
                +i++lqr++    +rlk+ + +  
  MMETSP1325-20131115|7740_1  2 QISDLQRKIIEGGSRLKQQQ-NLY 24
                78999999999999999988.544 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00046
   PF04102.7 25 evvaeqqkeidrlqrqlrllaerlkeleessne 57
                + ++e q+ei++++rq +  + ++++l+e+ ++
  MMETSP1325-20131115|7740_1 36 KNLIESQEEIAEMRRQFKIKNHQIEQLKEEIQT 68
                67999*******************999965544 PP

>> PF09551.5  Stage II sporulation protein R (spore_II_R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.4   0.00044      0.67      13      70 ..      14      71 ..       4      86 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00044
   PF09551.5 13 nsdseedqelKlkvrdevleelkekleelksieeakkvikeelkeieeiaekvikeeg 70
                 s  +++q+l  +vr + + + k+ +e+ ++i e ++  k + ++ie++ e++ ++++
  MMETSP1325-20131115|7740_1 14 GSRLKQQQNLYEAVRSDRNLYSKNLIESQEEIAEMRRQFKIKNHQIEQLKEEIQTKDH 71
                5777899****************************************99887655543 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   6.7   0.00077       1.2      53     115 ..      19      82 ..       2      87 .] 0.59

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00077
   PF10186.4  53 ekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.asaqlek 115
                 ++++  ++ ++++   ++++ + ++ i++ +++ + k+++ie+lke+++++ ++l   ++++ k
  MMETSP1325-20131115|7740_1  19 QQQNLYEAVRSDRNLYSKNLIESQEEIAEMRRQFKIKNHQIEQLKEEIQTKDHSLVkEHFNHHK 82 
                 2555556666666666777777777777777777777777777777777777777655555544 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   4.4   0.00068         1      71     132 ..      15      71 ..       2      73 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00068
                 HCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  71 kqakdndniesavskslekkiililekkilaqesqirvLqevlrsneskiqrLeqdiaqker 132
                 +  k+++n ++av ++  +++   + k+ ++ +++i +++++ + ++++i++L+++i++k++
  MMETSP1325-20131115|7740_1  15 SRLKQQQNLYEAVRSD--RNL---YSKNLIESQEEIAEMRRQFKIKNHQIEQLKEEIQTKDH 71 
                 4556677888888888..444...57788888899***********************9976 PP

>> PF04375.9  HemX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.0   0.00058      0.88      57     110 ..      19      74 ..       1      86 [. 0.66

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00058
   PF04375.9  57 elqaklealaqelkqlakakea................qlkqeleklirdnqealeqlekkleqldksle 110
                 ++q+  e              a                + ++e+++  + +++++eql+++++++d+sl 
  MMETSP1325-20131115|7740_1  19 QQQNLYE--------------AvrsdrnlysknliesqEEIAEMRRQFKIKNHQIEQLKEEIQTKDHSLV 74 
                 2333333..............23323344444444444578999999999****************9985 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.5    0.0011       1.6      55     114 ..      28      87 .]       3      87 .] 0.78

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0011
                 XXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  55 LesqnkeeenvealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleeee 114
                  +++n   +n  + ++e+ e++++ + + +++e+l++e ++ d+ l++++ ++ k+e+e+
  MMETSP1325-20131115|7740_1  28 RSDRNLYSKNLIESQEEIAEMRRQFKIKNHQIEQLKEEIQTKDHSLVKEHFNHHKVEKEK 87 
                 2333334448888999**************************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1804  (0.131949); expected 273.4 (0.02)
Passed bias filter:                      807  (0.0590257); expected 273.4 (0.02)
Passed Vit filter:                       102  (0.0074605); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 372.29
//
Query:       MMETSP1325-20131115|7743_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.011   14.8   1.1      0.013   14.5   0.8    1.1  1  PF06008.9  Laminin Domain I
      0.012   15.4   1.4      0.017   14.9   0.5    1.6  1  PF14197.1  Centrosome localisation domain of PPC89
      0.041   13.4   0.5      0.069   12.7   0.4    1.6  1  PF10198.4  Histone acetyltransferases subunit 3
      0.041   13.7   2.7      0.051   13.4   1.4    1.5  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
      0.061   12.9   1.0      0.095   12.3   0.7    1.4  1  PF01920.15 Prefoldin subunit
      0.062   12.7   0.4      0.066   12.6   0.3    1.1  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
        0.1   11.9   2.3      0.091   12.1   1.2    1.3  1  PF05529.7  B-cell receptor-associated protein 31-like
       0.19   11.7   2.1       0.23   11.4   1.4    1.1  1  PF13339.1  Apoptosis antagonizing transcription factor
       0.22   11.5   6.0        0.3   11.1   4.2    1.3  1  PF13747.1  Domain of unknown function (DUF4164)
       0.31   10.4   5.0       0.36   10.2   3.5    1.2  1  PF01025.14 GrpE


Domain annotation for each model (and alignments):
>> PF06008.9  Laminin Domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.8   9.6e-06     0.013     171     240 ..      23      90 ..      19      96 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 9.6e-06
   PF06008.9 171 lqeenegllealkddLneyeakLsDlrelldeaqaktrdAerlnlavqkrlreieekkeeveelkeqiee 240
                 +++  e l+  +k+dL+  e   +Dl  +++ea+a  ++Aerl ++v++   e++ k   +ee ke++++
  MMETSP1325-20131115|7743_1  23 PRARFEQLFSTVKEDLARQEYCDEDLDCVVEEAAA--AEAERLMAEVARLRAELQGKEADLEEFKEETSK 90 
                 6778899*************************987..79**************************99987 PP

>> PF14197.1  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.5   1.3e-05     0.017      45      68 ..      56      79 ..      53      82 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.3e-05
   PF14197.1 45 AyeelneLkaevealrkELeeqla 68
                A  e+++L+aev++lr+EL+ ++a
  MMETSP1325-20131115|7743_1 56 AAAEAERLMAEVARLRAELQGKEA 79
                67799***************9985 PP

>> PF10198.4  Histone acetyltransferases subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   5.1e-05     0.069      58      91 ..      24      55 ..      19     109 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.1e-05
   PF10198.4 58 earkkrLlelvkermayqeyktiledlDkqveqa 91
                +ar ++L++ vke +a+qey+   edlD  ve+a
  MMETSP1325-20131115|7743_1 24 RARFEQLFSTVKEDLARQEYCD--EDLDCVVEEA 55
                578899**************97..7777777765 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.4   3.7e-05     0.051      67     100 ..      58      91 ..      47      94 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.7e-05
                 HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  67 edaeeliaevkelkeelkaleaelkeleaelekl 100
                  +ae+l+aev+ l +el+ +ea+l+e ++e  k+
  MMETSP1325-20131115|7743_1  58 AEAERLMAEVARLRAELQGKEADLEEFKEETSKI 91 
                 689***************************9987 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.7     7e-05     0.095      63     101 ..      52      90 ..      44      95 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 7e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF01920.15  63 vkeeLeerketlekeiktlekqleklekeleelkeelyk 101
                 v+e   +++e+l +e+ +l+ +l+ +e++lee+kee  k
  MMETSP1325-20131115|7743_1  52 VEEAAAAEAERLMAEVARLRAELQGKEADLEEFKEETSK 90 
                 677778899**************************9876 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.3   4.8e-05     0.066     109     154 ..      58     103 ..      25     112 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.8e-05
   PF07106.8 109 ltteelleeiqelkkeveeieekLeslkeankevtkeeiekvkkey 154
                  + e l  e++ l+ e++  e+ Le++ke++ +++k    +  +  
  MMETSP1325-20131115|7743_1  58 AEAERLMAEVARLRAELQGKEADLEEFKEETSKISKRREAEFAESA 103
                 4678899999999999999999999999999999987766665555 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.2   6.7e-05     0.091     150     188 ..      48      93 ..      22      96 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.7e-05
   PF05529.7 150 l.......keekekklkeeveklkkeleekekdlealkkqaeglqk 188
                 l       ++++ ++l +ev++l++el+ ke dle +k+  ++++k
  MMETSP1325-20131115|7743_1  48 LdcvveeaAAAEAERLMAEVARLRAELQGKEADLEEFKEETSKISK 93 
                 144444446788999************************9988776 PP

>> PF13339.1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.4   0.00017      0.23      56     107 ..      54     101 ..      28     111 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00017
   PF13339.1  56 ksaekalkklldtlleLreaLleedkksseeeesesakkrkraktektslde 107
                 ++a ++++ l+ ++  Lr++L+ ++ + +e +e e++k  kr   ++ +++e
  MMETSP1325-20131115|7743_1  54 EAAAAEAERLMAEVARLRAELQGKEADLEEFKE-ETSKISKR---REAEFAE 101
                 5677899***************66655555554.55555666...2333333 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   4.2   0.00022       0.3      21      75 ..      31      94 ..      22     101 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00022
   PF13747.1 21 esaverrleaerkr.........deleaeiqaldadrsrLaqeLdkaearaerleeanrEvsrr 75
                 s v++ l +++           ++++ae ++l a+ +rL +eL ++ea +e+ +e ++ +s+r
  MMETSP1325-20131115|7743_1 31 FSTVKEDLARQEYCdedldcvveEAAAAEAERLMAEVARLRAELQGKEADLEEFKEETSKISKR 94
                4444444444444344446666688999****************************99999987 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.5   0.00027      0.36      14      62 ..      53     102 ..      34     111 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00027
  PF01025.14  14 eeeleeeleeleeevkelkdkllrllaefenlrkrtekeke.eakkyaie 62 
                 ee+ ++e e+l +ev++l+ +l+ ++a++e++++ t k  + + +++a++
  MMETSP1325-20131115|7743_1  53 EEAAAAEAERLMAEVARLRAELQGKEADLEEFKEETSKISKrREAEFAES 102
                 66778888999999999999999999999999999976555244444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       997  (0.0729228); expected 273.4 (0.02)
Passed bias filter:                      676  (0.0494441); expected 273.4 (0.02)
Passed Vit filter:                       101  (0.00738736); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.43u 0.43s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 564.14
//
Query:       MMETSP1325-20131115|7742_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-18   66.9   7.5    1.1e-18   66.7   5.2    1.0  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
       0.12   12.7   4.7          1    9.6   1.1    2.3  2  PF04116.8  Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   5.2   1.7e-22   1.1e-18       4     143 ..      50     196 ..      46     200 .] 0.85

  Alignments for each domain:
  == domain 1    score: 66.7 bits;  conditional E-value: 1.7e-22
                 HHHHHHHHHH----TTT---------HHHHHHHHHHHHHHHHHHHHH---TTT---.......-------....--TT...-B----BHHHHHHH---HHHHH--------TTTB-HHHHHHHHHHHHHHTHHHHHHHH--.---TTT CS
  PF00909.16   4 llaaalvifmqagfalleaglvrsknvlnilvknlldlavvvllyvlfGyslafgksk....gvsgfign....lglsaagvqdetlldglfflfqlafaataitivsgavaerikfsayllfsallgtlvyppvahwvwgeggwlak 143
                 ++  ++ i+m+ag  +  +gl+r kn  ++++ nl+d +v+ l+++++G++ ++g++       +g++g+    ++l++ +  +++++ +  f+f ++ +a + ti+sg+++er ++  yl++ a+++++  p vah +w+ gg+++ 
  MMETSP1325-20131115|7742_1  50 IVGGIVGIIMKAGYSMRHSGLCRCKNQFATVMANLFDGMVGALMFYIVGFGWTMGRDDyvesTANGLMGTslylHELNHLTEHEDAITWA-RFIFLFSLCAQSFTIMSGGIMERYTLWGYLTVVAIFAGMAFPSVAHSIWNPGGVFYA 196
                 3445566888*********************************************99733334455555599987777777666666554.69****************************************************986 PP

>> PF04116.8  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.01        72      68      96 ..      47      74 ..      26      87 .. 0.78
   2 ?    9.6   1.1   0.00015         1      26      91 ..     122     188 ..     115     197 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.01
   PF04116.8 68 tsllvillvvllgallylltHsgvhhrlk 96
                + l+v  +v +++  +y ++Hsg+  r k
  MMETSP1325-20131115|7742_1 47 FYLIVGGIVGIIMKAGYSMRHSGL-CRCK 74
                46778889999************9.4443 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00015
   PF04116.8  26 wrfHkvHHssesltaltafrihplealllalllllllllllgtsllvillv..vllgallylltHsgv 91 
                 + +H++ H  e+ +a+t  r+ +l +l+++ +++++ +++ + +l+ +l+v  +++g+ +  + Hs +
  MMETSP1325-20131115|7742_1 122 Y-LHELNHLTEHEDAITWARFIFLFSLCAQSFTIMSGGIMERYTLWGYLTVvaIFAGMAFPSVAHSIW 188
                 4.8*************9999889999999999998888886666655554400555666677777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 978.10
//
Query:       MMETSP1325-20131115|7745_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|7744_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 649.68
//
Query:       MMETSP1325-20131115|7746_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.39s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 215.18
//
Query:       MMETSP1325-20131115|7747_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|7748_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 797.16
//
Query:       MMETSP1325-20131115|7749_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 993.49
//
Query:       MMETSP1325-20131115|7752_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       552  (0.0403745); expected 273.4 (0.02)
Passed bias filter:                      474  (0.0346694); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 484.16
//
Query:       MMETSP1325-20131115|7751_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 361.63
//
Query:       MMETSP1325-20131115|7754_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-20   71.3   0.3    9.4e-09   34.6   0.1    2.8  4  PF13414.1  TPR repeat
    1.2e-15   55.9   0.3    1.2e-06   27.8   0.0    3.4  3  PF07719.12 Tetratricopeptide repeat
    7.6e-15   53.6   0.1    4.8e-08   32.1   0.0    3.3  3  PF00515.23 Tetratricopeptide repeat
    9.8e-13   48.2   0.2    1.4e-05   25.4   0.0    2.5  3  PF13432.1  Tetratricopeptide repeat
    5.3e-10   38.2   0.0    3.6e-05   23.1   0.0    3.4  3  PF13181.1  Tetratricopeptide repeat
    7.2e-10   38.1   0.0      0.009   16.0   0.0    3.8  4  PF13431.1  Tetratricopeptide repeat
      2e-09   37.1   0.7    9.1e-06   25.4   0.0    2.7  3  PF13424.1  Tetratricopeptide repeat
    2.1e-09   37.0   0.5      0.022   15.2   0.0    3.4  3  PF13428.1  Tetratricopeptide repeat
    4.8e-09   36.1   0.1    1.8e-05   24.6   0.0    2.4  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    5.3e-09   35.6   0.2    8.5e-06   25.4   0.1    2.1  2  PF13371.1  Tetratricopeptide repeat
    2.8e-05   23.1   0.1      0.015   14.2   0.0    2.1  2  PF13429.1  Tetratricopeptide repeat
    3.1e-05   24.0   0.1      0.043   14.1   0.0    3.5  4  PF13174.1  Tetratricopeptide repeat
    0.00026   20.4   0.9      0.088   12.5   0.0    3.0  4  PF13176.1  Tetratricopeptide repeat
    0.00035   20.2   0.1       0.68    9.8   0.1    3.3  3  PF13374.1  Tetratricopeptide repeat
     0.0022   17.1   0.0       0.39   10.0   0.0    2.4  2  PF01239.17 Protein prenyltransferase alpha subunit repeat
     0.0033   17.0   0.1        0.4   10.4   0.0    2.4  2  PF07720.7  Tetratricopeptide repeat
     0.0064   15.1   0.2      0.019   13.6   0.0    1.7  2  PF12569.3  NMDA receptor-regulated protein 1
  ------ inclusion threshold ------
      0.012   14.5   0.1      0.028   13.3   0.0    1.6  1  PF02259.18 FAT domain
      0.029   12.8   0.0      0.041   12.3   0.0    1.4  1  PF10300.4  Protein of unknown function (DUF3808)
      0.031   14.0   0.4         12    5.5   0.0    2.9  2  PF12968.2  Domain of Unknown Function (DUF3856)
      0.049   13.5   0.0        9.1    6.2   0.0    2.3  2  PF12688.2  Tetratrico peptide repeat
       0.14   12.0   0.2        7.6    6.6   0.0    2.6  2  PF01535.15 PPR repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.1   1.5e-11   9.4e-09       7      61 ..       8      61 ..       2      69 .. 0.88
   2 !   23.7   0.0   3.8e-08   2.4e-05      21      69 .]      56     103 ..      55     103 .. 0.85
   3 !   21.4   0.0   2.1e-07   0.00013       2      36 ..      71     105 ..      70     113 .. 0.78
   4 ?   -1.2   0.0       2.3   1.4e+03      18      29 ..     108     119 ..     104     119 .. 0.80

  Alignments for each domain:
  == domain 1    score: 34.6 bits;  conditional E-value: 1.5e-11
   PF13414.1  7 kelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledy 61
                  l  al++ +++deA+ +++ A  l+p n+++++++A +++ + k+ +eAl+++
  MMETSP1325-20131115|7754_1  8 CHLSLALYETRKFDEALGMLKLAAHLEPRNPQVWFQRATILMAMEKN-DEALKEL 61
                5567789*************************************976.99*9987 PP

  == domain 2    score: 23.7 bits;  conditional E-value: 3.8e-08
   PF13414.1  21 eAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                 eA++++      +p+ a++y+ l+++  klg + +eAl++++ Al ldP
  MMETSP1325-20131115|7754_1  56 EALKELMDVQTHSPKEAQVYFWLGKVCKKLG-RIDEALRYFTFALDLDP 103
                 5666666666668999***************.689*************9 PP

  == domain 3    score: 21.4 bits;  conditional E-value: 2.1e-07
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleldpnn 36 
                 +A++++ lG ++ k+g+ deA+++++ Al+ldp++
  MMETSP1325-20131115|7754_1  71 EAQVYFWLGKVCKKLGRIDEALRYFTFALDLDPKD 105
                 68888888888888888888888888888888875 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 2.3
   PF13414.1  18 dydeAieayekA 29 
                 + ++A+e +e+A
  MMETSP1325-20131115|7754_1 108 QIKNALERLEQA 119
                 678899999887 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.1   9.1e-05     0.056       3      34 .]       6      37 ..       4      37 .. 0.93
   2 !   11.5   0.0   0.00031      0.19       2      24 ..      39      61 ..      38      70 .. 0.88
   3 !   27.8   0.0     2e-09   1.2e-06       1      34 []      72     105 ..      72     105 .. 0.96

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 9.1e-05
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldPnn 34
                +++ l la+y+ ++++eAl  ++ A  l+P+n
  MMETSP1325-20131115|7754_1  6 LYCHLSLALYETRKFDEALGMLKLAAHLEPRN 37
                5899*********************9999987 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00031
                HHHHHHHHHHHHTT-HHHHHHHH CS
  PF07719.12  2 ealynlGlayyklgdyeeAleaf 24
                +++++++ +++++ + +eAl+ +
  MMETSP1325-20131115|7754_1 39 QVWFQRATILMAMEKNDEALKEL 61
                79******************975 PP

  == domain 3    score: 27.8 bits;  conditional E-value: 2e-09
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 a+++++lG+++ klg+ +eAl++f  Al ldP++
  MMETSP1325-20131115|7754_1  72 AQVYFWLGKVCKKLGRIDEALRYFTFALDLDPKD 105
                 689*****************************86 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0087       5.4       5      34 .]       8      37 ..       4      37 .. 0.84
   2 !   11.4   0.0   0.00027      0.17       2      22 ..      39      59 ..      38      60 .. 0.94
   3 !   32.1   0.0   7.7e-11   4.8e-08       1      34 []      72     105 ..      72     105 .. 0.96

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0087
                HHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  5 ynlGnaylklgkydeAleyyekALelnPnn 34
                + l +a+++  k+deAl   + A  l+P n
  MMETSP1325-20131115|7754_1  8 CHLSLALYETRKFDEALGMLKLAAHLEPRN 37
                555579999********9999999999976 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.00027
                HHHHHHHHHHHHTT-HHHHHH CS
  PF00515.23  2 kalynlGnaylklgkydeAle 22
                +++++++ +++ ++k deAl+
  MMETSP1325-20131115|7754_1 39 QVWFQRATILMAMEKNDEALK 59
                79*****************97 PP

  == domain 3    score: 32.1 bits;  conditional E-value: 7.7e-11
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALelnPnn 34 
                 a++++ lG ++ klg+ deAl y+  AL l+P++
  MMETSP1325-20131115|7754_1  72 AQVYFWLGKVCKKLGRIDEALRYFTFALDLDPKD 105
                 789*****************************86 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   2.3e-08   1.4e-05       5      53 ..      12      61 ..       9      65 .. 0.93
   2 !   23.4   0.0   9.6e-08     6e-05      19      64 ..      57     105 ..      56     106 .. 0.91
   3 ?   -1.9   0.0       8.6   5.3e+03       3      14 ..     111     122 ..     109     123 .. 0.57

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 2.3e-08
   PF13432.1  5 rallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAa.al 53
                +al++ +++deAl  l+ a  l+P+++++++ +a +l+++ + deA+ +l
  MMETSP1325-20131115|7754_1 12 LALYETRKFDEALGMLKLAAHLEPRNPQVWFQRATILMAMEKNDEALkEL 61
                79********************************************9666 PP

  == domain 2    score: 23.4 bits;  conditional E-value: 9.6e-08
   PF13432.1  19 aleaalala...PeaaeallllaeallrlgrldeAaallraalalaPdd 64 
                 al+++++ +   P+ a+++++l+ ++ +lgr deA++++  al+l+P+d
  MMETSP1325-20131115|7754_1  57 ALKELMDVQthsPKEAQVYFWLGKVCKKLGRIDEALRYFTFALDLDPKD 105
                 778888888999***************************9999999986 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 8.6
   PF13432.1   3 lArallraGdyd 14 
                 +A+++l++ d++
  MMETSP1325-20131115|7754_1 111 NALERLEQADVE 122
                 556666666655 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.094        58       3      33 ..       6      36 ..       4      38 .. 0.84
   2 !    7.8   0.0    0.0045       2.8       2      31 ..      39      68 ..      38      71 .. 0.87
   3 !   23.1   0.0   5.8e-08   3.6e-05       1      34 []      72     106 ..      72     106 .. 0.94

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.094
                -TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekalelkpr 33
                +y+ l++++ ++ ++d+A+  l+ a  l pr
  MMETSP1325-20131115|7754_1  6 LYCHLSLALYETRKFDEALGMLKLAAHLEPR 36
                5899**************9888888877774 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0045
                --TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelk 31
                +++++++ i++ + + d+A++ l+ +   +
  MMETSP1325-20131115|7754_1 39 QVWFQRATILMAMEKNDEALKELMDVQTHS 68
                68*******************998877655 PP

  == domain 3    score: 23.1 bits;  conditional E-value: 5.8e-08
                 ---TTT---HHHHTT-HHHHHHHHH---HHHH..H CS
   PF13181.1   1 akayynlGdiYrqlGdydkAkeylekalelkp.rn 34 
                 a++y+ lG++ ++lG++d+A+ y+  al+l+p +n
  MMETSP1325-20131115|7754_1  72 AQVYFWLGKVCKKLGRIDEALRYFTFALDLDPkDN 106
                 579*****************************776 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.058        36      10      33 ..       1      24 [.       1      25 [. 0.93
   2 !   16.0   0.0   1.5e-05     0.009       5      33 ..      30      58 ..      26      59 .. 0.87
   3 !   12.8   0.0   0.00016     0.097       8      33 ..      67      92 ..      62      93 .. 0.92
   4 ?   -1.4   0.0       5.3   3.3e+03       5      12 ..      98     105 ..      98     107 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.058
   PF13431.1 10 PnnadaynnLAelllnnGdleeAe 33
                P ++++y+ L ++l++  +++eA+
  MMETSP1325-20131115|7754_1  1 PQSSVLYCHLSLALYETRKFDEAL 24
                889*************99999995 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 1.5e-05
   PF13431.1  5 aleldPnnadaynnLAelllnnGdleeAe 33
                a  l+P n+++++++A++l +  + +eA+
  MMETSP1325-20131115|7754_1 30 AAHLEPRNPQVWFQRATILMAMEKNDEAL 58
                55579*********************997 PP

  == domain 3    score: 12.8 bits;  conditional E-value: 0.00016
   PF13431.1  8 ldPnnadaynnLAelllnnGdleeAe 33
                ++P+ a++y+ L+++ +++G+ +eA+
  MMETSP1325-20131115|7754_1 67 HSPKEAQVYFWLGKVCKKLGRIDEAL 92
                57999*******************97 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 5.3
   PF13431.1   5 aleldPnn 12 
                 al+ldP++
  MMETSP1325-20131115|7754_1  98 ALDLDPKD 105
                 899***97 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   2.6e-05     0.016       7      67 ..       6      59 ..       1      64 [. 0.84
   2 !   25.4   0.0   1.5e-08   9.1e-06       7      77 ..      40     103 ..      39     104 .. 0.84
   3 ?   -2.3   0.0       6.4     4e+03      65      72 ..     112     119 ..     108     120 .. 0.42

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.6e-05
   PF13424.1  7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAle 67
                +++ l l+l++ +++deAl ++    +l+++l +++p+   ++++ a++++a++++deAl+
  MMETSP1325-20131115|7754_1  6 LYCHLSLALYETRKFDEALGML----KLAAHLEPRNPQ---VWFQRATILMAMEKNDEALK 59
                68899999***********775....555577788876...7*****************98 PP

  == domain 2    score: 25.4 bits;  conditional E-value: 1.5e-08
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77 
                 ++++ a++l+++++ deAl+ +  +         ++p  a +++ l+ ++ +lg+ deAl+y+  Al++++
  MMETSP1325-20131115|7754_1  40 VWFQRATILMAMEKNDEALKELMDVQ-------THSPKEAQVYFWLGKVCKKLGRIDEALRYFTFALDLDP 103
                 57788999999999999996655544.......346777*************************9999976 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 6.4
   PF13424.1  65 AleylekA 72 
                 Ale le+A
  MMETSP1325-20131115|7754_1 112 ALERLEQA 119
                 33333333 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1     7e-05     0.044       7      43 ..      10      46 ..       5      47 .. 0.90
   2 !   14.9   0.0   4.5e-05     0.028       1      43 [.      38      80 ..      38      81 .. 0.94
   3 !   15.2   0.0   3.6e-05     0.022       3      34 ..      74     105 ..      72     121 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 7e-05
   PF13428.1  7 larallalGdpdeAiallrralalaPddaealllLar 43
                l  al +   +deA+ +l+ a+ l P +++++++ a 
  MMETSP1325-20131115|7754_1 10 LSLALYETRKFDEALGMLKLAAHLEPRNPQVWFQRAT 46
                667899999***********************99886 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 4.5e-05
   PF13428.1  1 peallalarallalGdpdeAiallrralalaPddaealllLar 43
                p+++ ++a +l+a++  deA++ l ++  ++P++a++++ L++
  MMETSP1325-20131115|7754_1 38 PQVWFQRATILMAMEKNDEALKELMDVQTHSPKEAQVYFWLGK 80
                5789*********************************999986 PP

  == domain 3    score: 15.2 bits;  conditional E-value: 3.6e-05
   PF13428.1   3 allalarallalGdpdeAiallrralalaPdd 34 
                 ++  l+ ++  lG+ deA++++  al l+P+d
  MMETSP1325-20131115|7754_1  74 VYFWLGKVCKKLGRIDEALRYFTFALDLDPKD 105
                 68889*************************86 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.9e-05     0.012      27      82 ..       5      62 ..       1      64 [. 0.86
   2 !   24.6   0.0   2.9e-08   1.8e-05       3      81 ..      18      95 ..      16      98 .. 0.91
   3 ?   -2.1   0.0       6.4     4e+03       2      14 ..     106     118 ..     105     124 .. 0.61

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.9e-05
                CHHH.HHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHH CS
   PF12895.2 27 ylya.lAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLe 82
                +ly  l l+ly++ ++++A+  l+   +l++++++  +  A  l +++k deA++ L+
  MMETSP1325-20131115|7754_1  5 VLYChLSLALYETRKFDEALGMLKLaAHLEPRNPQVWFQRATILMAMEKNDEALKELM 62
                444459*****************55999999**9999999*************98775 PP

  == domain 2    score: 24.6 bits;  conditional E-value: 2.9e-08
                T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCH CS
   PF12895.2  3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavL 81
                + +++Al ++ ++  ++p+  +  +++  A  l+ +++ ++A++ l + + ++++ ++  + l++++ klg+ deA++ +
  MMETSP1325-20131115|7754_1 18 RKFDEALGMLKLAAHLEPR--NPQVWFQRATILMAMEKNDEALKELMDvQTHSPKEAQVYFWLGKVCKKLGRIDEALRYF 95
                6789999999999999993..789**********************998888889999999***************9876 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 6.4
                 TT-HHHHHHHHHH CS
   PF12895.2   2 qhnyknAlflaek 14 
                 + ++knAl  +e+
  MMETSP1325-20131115|7754_1 106 NTQIKNALERLEQ 118
                 4566666655554 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.1   1.4e-08   8.5e-06       5      64 ..      14      73 ..      10      77 .. 0.91
   2 !    8.6   0.0    0.0024       1.5      38      66 ..      81     110 ..      78     118 .. 0.76

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 1.4e-08
   PF13371.1  5 ylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapd 64
                + + ++f++AL ++ + ++l P  p+ +  r+ +l+ ++   +A+++L     ++p   +
  MMETSP1325-20131115|7754_1 14 LYETRKFDEALGMLKLAAHLEPRNPQVWFQRATILMAMEKNDEALKELMDVQTHSPKEAQ 73
                567899******************************************999999996554 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0024
   PF13371.1  38 llaqlgclaaAaedLeaflelcp.dapdae 66 
                 +  +lg+  +A++ ++++l+l+p d  ++ 
  MMETSP1325-20131115|7754_1  81 VCKKLGRIDEALRYFTFALDLDPkDNTQIK 110
                 66789******************5544444 PP

>> PF13429.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1   0.00071      0.44      13      64 ..       9      58 ..       2      60 .. 0.82
   2 !   14.2   0.0   2.3e-05     0.015     125     183 ..      50     109 ..      43     116 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00071
   PF13429.1 13 klAnllyakgdfkkAlevLksaadkaapskdeeyWrtladLAwalqdddtar 64
                +l+  ly++++f++Al +L + a +  ++++ + W ++a+   a+++ d+a+
  MMETSP1325-20131115|7754_1  9 HLSLALYETRKFDEALGML-KLAAHL-EPRNPQVWFQRATILMAMEKNDEAL 58
                56788999***********.677788.5999999999999888888888765 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 2.3e-05
   PF13429.1 125 dykrieellasleekeaae.qsalfllaraellrqegqkkkAlrllrralalkpassdlr 183
                 ++++ +e l++l+  ++ + ++a++++ + ++ ++ g+ ++Alr +  al+l+p++++ +
  MMETSP1325-20131115|7754_1  50 AMEKNDEALKELMDVQTHSpKEAQVYFWLGKVCKKLGRIDEALRYFTFALDLDPKDNTQI 109
                 555666777777764443349999999***************************987644 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.41   2.5e+02       7      24 ..      11      28 ..       9      36 .. 0.81
   2 ?    3.2   0.0      0.21   1.3e+02       2      26 ..      40      64 ..      39      70 .. 0.80
   3 !   14.1   0.0   6.9e-05     0.043       2      32 ..      74     104 ..      73     105 .. 0.90
   4 ?   -1.1   0.0       5.1   3.2e+03      15      25 ..     108     118 ..     104     119 .. 0.51

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.41
                HHHHHHHHHHHHHHHHHH CS
   PF13174.1  7 alsyyklgdtdeAleale 24
                 l++y++ ++deAl +l+
  MMETSP1325-20131115|7754_1 11 SLALYETRKFDEALGMLK 28
                57899977*****99886 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.21
                HHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  2 AlyklalsyyklgdtdeAlealerl 26
                +++++a ++ ++ + deAl+ l ++
  MMETSP1325-20131115|7754_1 40 VWFQRATILMAMEKNDEALKELMDV 64
                67999999999889****9988666 PP

  == domain 3    score: 14.1 bits;  conditional E-value: 6.9e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   2 AlyklalsyyklgdtdeAlealerlikeyPd 32 
                 ++++l+++ +klg+ deAl+++   ++  P+
  MMETSP1325-20131115|7754_1  74 VYFWLGKVCKKLGRIDEALRYFTFALDLDPK 104
                 79*********99*********988888776 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 5.1
                 HHHHHHHHHHH CS
   PF13174.1  15 dtdeAlealer 25 
                 +  +Ale le+
  MMETSP1325-20131115|7754_1 108 QIKNALERLEQ 118
                 44555555554 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.031        19       3      34 ..       8      37 ..       6      39 .. 0.79
   2 ?   -2.5   0.0         9   5.6e+03       7      19 ..      46      58 ..      41      61 .. 0.60
   3 !   12.5   0.0   0.00014     0.088       5      34 ..      78     105 ..      75     107 .. 0.89
   4 ?   -2.1   0.0       6.7   4.2e+03      16      24 ..     110     118 ..     108     119 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.031
   PF13176.1  3 lnLarlysrlgdyekAielyeraLaltkdpld 34
                + L  +  + +++++A+ +++   a + +p++
  MMETSP1325-20131115|7754_1  8 CHLSLALYETRKFDEALGMLKL--AAHLEPRN 37
                55666666789***********..99988876 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 9
   PF13176.1  7 rlysrlgdyekAi 19
                 + +++ + ++A+
  MMETSP1325-20131115|7754_1 46 TILMAMEKNDEAL 58
                4555566666665 PP

  == domain 3    score: 12.5 bits;  conditional E-value: 0.00014
   PF13176.1   5 LarlysrlgdyekAielyeraLaltkdpld 34 
                 L++++ +lg+ ++A+++++   al+ dp d
  MMETSP1325-20131115|7754_1  78 LGKVCKKLGRIDEALRYFTF--ALDLDPKD 105
                 89*****************9..88888766 PP

  == domain 4    score: -2.1 bits;  conditional E-value: 6.7
   PF13176.1  16 ekAielyer 24 
                 ++A+e +e+
  MMETSP1325-20131115|7754_1 110 KNALERLEQ 118
                 578888887 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.1    0.0011      0.68       7      26 ..       9      28 ..       5      34 .. 0.87
   2 ?    0.9   0.0      0.69   4.3e+02       9      23 ..      45      59 ..      45      67 .. 0.81
   3 ?    5.3   0.0     0.028        17       8      24 ..      78      94 ..      72      96 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0011
   PF13374.1  7 nLAlalrargryeeAlalee 26
                +L lal+++++++eAl ++ 
  MMETSP1325-20131115|7754_1  9 HLSLALYETRKFDEALGMLK 28
                799*************9985 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.69
   PF13374.1  9 AlalrargryeeAla 23
                A +l+a+ + +eAl+
  MMETSP1325-20131115|7754_1 45 ATILMAMEKNDEALK 59
                678999*******86 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.028
   PF13374.1  8 LAlalrargryeeAlal 24
                L+ ++ ++gr +eAl++
  MMETSP1325-20131115|7754_1 78 LGKVCKKLGRIDEALRY 94
                888999********987 PP

>> PF01239.17  Protein prenyltransferase alpha subunit repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00062      0.39       3      27 ..      24      48 ..      22      52 .. 0.78
   2 ?    5.0   0.0     0.024        15       1      18 [.      90     107 ..      90     107 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00062
  PF01239.17  3 LelteklieldpkNysaWnyRrwll 27
                L   + ++ l p+N ++W+ R  +l
  MMETSP1325-20131115|7754_1 24 LGMLKLAAHLEPRNPQVWFQRATIL 48
                56666667789**********9887 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.024
  PF01239.17   1 eELelteklieldpkNys 18 
                 e L++ + +++ldpk+++
  MMETSP1325-20131115|7754_1  90 EALRYFTFALDLDPKDNT 107
                 67899999*******986 PP

>> PF07720.7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.046        28      10      36 .]      13      37 ..       7      37 .. 0.85
   2 !   10.4   0.0   0.00065       0.4      13      36 .]      84     105 ..      75     105 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.046
                HHHHTT-HHHHHHH..HHHHHHH-TT- CS
   PF07720.7 10 efynkkkyqeArelfsYallaildken 36
                ++y   k++eA++ +   l+a l++ n
  MMETSP1325-20131115|7754_1 13 ALYETRKFDEALGMLK--LAAHLEPRN 37
                689999********66..999998765 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00065
                 HTT-HHHHHHH..HHHHHHH-TT- CS
   PF07720.7  13 nkkkyqeArelfsYallaildken 36 
                   ++++eA+ +  + ++  ld+++
  MMETSP1325-20131115|7754_1  84 KLGRIDEALRY--FTFALDLDPKD 105
                 579********..66*****9997 PP

>> PF12569.3  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.1     0.013       8.1     192     249 ..       3      58 ..       1      63 [. 0.70
   2 !   13.6   0.0     3e-05     0.019      10      81 ..      44     116 ..      36     125 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.013
   PF12569.3 192 stllwalyflAqhydklgsrekaleyidkaiehtptlvelymtkarilkhaGdlekAa 249
                 s++l+ +  lA +  ++++ ++al ++  a + +p  + ++  +a+il  +   ++A 
  MMETSP1325-20131115|7754_1   3 SSVLYCHLSLALY--ETRKFDEALGMLKLAAHLEPRNPQVWFQRATILMAMEKNDEAL 58 
                 6667777777766..4567788888888888888888888888888887666555554 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 3e-05
   PF12569.3  10 knslleeagkleeALehLeekekkivDklavlelkaelllkLgrkeeAekvyraLlernp.enkeYyegleka 81 
                 ++++l  ++k++eAL++L   + +   + +v    ++++ kLgr +eA ++++  l+  p +n++  ++le+ 
  MMETSP1325-20131115|7754_1  44 RATILMAMEKNDEALKELMDVQTHSPKEAQVYFWLGKVCKKLGRIDEALRYFTFALDLDPkDNTQIKNALERL 116
                 5788999999999999999999999999999999999999999999999998877776552555555555554 PP

>> PF02259.18  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.5e-05     0.028     194     295 ..      14     109 ..       1     125 [. 0.81

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.5e-05
  PF02259.18 194 lWakgeqeeAlqkLreftskelskdlesasdselksgltekleeisstnlekeetkllarcflklGewleklksnweqekkdeilkaystatefdpqwykaw 295
                 l+++ + +eAl +L+  +  e  ++    +++ + +   ++ e  ++  +++ + + +a++++ lG+ ++kl      +++de+l +++ a ++dp+   + 
  MMETSP1325-20131115|7754_1  14 LYETRKFDEALGMLKLAAHLEPRNPQVWFQRATILMAMEKNDEALKELMDVQTHSPKEAQVYFWLGKVCKKL------GRIDEALRYFTFALDLDPKDNTQI 109
                 5777777999999999999999999999999999988766666666666788888999**************......****************99876644 PP

>> PF10300.4  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.7e-05     0.041     241     301 ..      52     111 ..       2     115 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 6.7e-05
   PF10300.4 241 eapleeleelLeksrkrfPksalwllfearieslkgnldeAlelleeiidesqselkqvka 301
                 e ++e l+e L++++ + Pk a + +  +++++  g++deAl+++  ++d + ++  q+k 
  MMETSP1325-20131115|7754_1  52 EKNDEALKE-LMDVQTHSPKEAQVYFWLGKVCKKLGRIDEALRYFTFALDLDPKDNTQIKN 111
                 445555555.55566668********************************99999999986 PP

>> PF12968.2  Domain of Unknown Function (DUF3856)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.2     0.037        23      58     122 ..       7      60 ..       3      67 .. 0.57
   2 ?    5.5   0.0     0.019        12      54      80 ..      71      97 ..      61     115 .. 0.67

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.037
   PF12968.2  58 havlsealaklgrydealesaekalryfnrrGeleqdeGklWiaavfsravaleelGrkeealke 122
                 ++ ls al + +++deal   + a +       le  + ++W    f+ra+ l ++ +++ealke
  MMETSP1325-20131115|7754_1   7 YCHLSLALYETRKFDEALGMLKLAAH-------LEPRNPQVW----FQRATILMAMEKNDEALKE 60 
                 56666666666777666655555443.......333333333....5666666666666666665 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.019
   PF12968.2 54 dalchavlsealaklgrydealesaek 80
                +a ++ +l +   klgr deal+    
  MMETSP1325-20131115|7754_1 71 EAQVYFWLGKVCKKLGRIDEALRYFTF 97
                566666666666666666666654443 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.029        18      53     100 ..      19      63 ..       2      70 .. 0.69
   2 ?    6.2   0.0     0.015       9.1      37      73 ..      71     107 ..      67     124 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.029
   PF12688.2  53 rveeslalleaelaeapgdelddalaaflALaLssagrereavaivlr 100
                 + +e+l +l+ +++  p    +  +   +A +L+++ +++ea++ +++
  MMETSP1325-20131115|7754_1  19 KFDEALGMLKLAAHLEPR---NPQVWFQRATILMAMEKNDEALKELMD 63 
                 667777777777776555...566777778888888888888877665 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.015
   PF12688.2  37 rrratiqlaSsLRnlGrveeslalleaelaeapgdel 73 
                   +++  l+   + lGr++e+l+ ++ +l+  p+d+ 
  MMETSP1325-20131115|7754_1  71 EAQVYFWLGKVCKKLGRIDEALRYFTFALDLDPKDNT 107
                 56777788888999************99998787654 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.18   1.1e+02       9      24 ..      13      28 ..       5      30 .. 0.78
   2 ?    6.6   0.0     0.012       7.6       9      23 ..      81      95 ..      78      96 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.18
  PF01535.15  9 gyckaGkleeAlelfk 24
                ++   +k++eAl ++k
  MMETSP1325-20131115|7754_1 13 ALYETRKFDEALGMLK 28
                5667789******997 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.012
  PF01535.15  9 gyckaGkleeAlelf 23
                ++ k G+++eAl++f
  MMETSP1325-20131115|7754_1 81 VCKKLGRIDEALRYF 95
                6889********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       651  (0.0476156); expected 273.4 (0.02)
Passed bias filter:                      570  (0.041691); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.57
# Mc/sec: 520.59
//
Query:       MMETSP1325-20131115|7756_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-06   26.1   0.3    2.9e-06   26.0   0.2    1.0  1  PF04791.11 LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.2   2.1e-10   2.9e-06       6      86 ..       6      80 ..       1      82 [. 0.73

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 2.1e-10
  PF04791.11  6 lvilyllayillsrykrkdeqeaarislilvtfglavslisvllLPldVisnevllsyprsyylqwlnaslikgLWnlvyl 86
                +++l  +  ++++ +  +++q a++  + lv+f+l v+ +++l LPldV++n+           +  ++++ +gL  ++y+
  MMETSP1325-20131115|7756_1  6 ILLLIGINTYVVVLWADPKDQSASYWLTALVVFALVVAEGAILGLPLDVANNQ------DIGFSAGTSTDVCGGLDMYIYW 80
                344444567899999************************************32......2223344455555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|7755_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       782  (0.0571972); expected 273.4 (0.02)
Passed bias filter:                      495  (0.0362054); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 899.76
//
Query:       MMETSP1325-20131115|7757_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   14.2   0.0      0.052   13.5   0.0    1.5  1  PF05641.7 Agenet domain
      0.085   12.0   0.8        9.4    5.5   0.0    2.1  2  PF07988.7 LMSTEN motif


Domain annotation for each model (and alignments):
>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   7.7e-06     0.052       3      48 ..      38      80 ..      36      85 .] 0.79

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 7.7e-06
   PF05641.7  3 kGseVEVsseeeglrgaWfrAkVlkelkeskykveyddlsledges 48
                +G+++E +    g +  Wf++k+  ++++ +y + ydd ++e   +
  MMETSP1325-20131115|7757_1 38 EGDKIEARH---GGGRRWFPGKIAAVHGDGTYDIAYDDGDKESKVK 80
                677777665...55777********************998886655 PP

>> PF07988.7  LMSTEN motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1    0.0017        11      22      33 ..       3      14 ..       1      17 [. 0.88
   2 ?    5.5   0.0    0.0014       9.4      22      33 ..      71      82 ..      66      84 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0017
   PF07988.7 22 eDPdKEKriKEL 33
                +D dKE ++K L
  MMETSP1325-20131115|7757_1  3 DDGDKESKVKAL 14
                899*******77 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0014
   PF07988.7 22 eDPdKEKriKEL 33
                +D dKE ++K L
  MMETSP1325-20131115|7757_1 71 DDGDKESKVKAL 82
                899*******76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:01.10
# Mc/sec: 185.17
//
Query:       MMETSP1325-20131115|7761_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 460.10
//
Query:       MMETSP1325-20131115|7762_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 555.75
//
Query:       MMETSP1325-20131115|7753_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.3e-135  452.2   0.0   2.6e-135  452.1   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor
  ------ inclusion threshold ------
      0.013   16.0   0.3      0.026   15.0   0.2    1.4  1  PF06877.6  Protein of unknown function (DUF1260)


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  452.1   0.0  3.7e-139  2.6e-135     282     707 ..       1     429 [.       1     430 [. 0.96

  Alignments for each domain:
  == domain 1    score: 452.1 bits;  conditional E-value: 3.7e-139
  PF03028.10 282 gplGWnksYeFnegDlrisldvldnyleanapekvpwealryllgeimYGGritddfDrrllrtyleelfteellde..elelap..kdesfkvPekkeyeeyleyiee.LpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksreekvkqvlkdileklp.klfdkeelkekltaeeekdplvvvlvqEiermnillkeirrslkelskglkGeltiteeleellkallkdkvPasWakkaypslkgLaswlsdllkRikqlekwted.llkpktvwlsglfnpqsfltairQsvarknkwpLdklalqvevtkkek.eetesapeegvyveGlfleGarwdlkekllaesklkellsalpviwvkaveadkkeeksvyecPvYktkaRkeltlvltlklktkekkskwilagvalll 707
                 gp+G n+ Y+F++gDlr s + l+ny+e++   k+pw +l+y++geimYGG+i++dfDr l +tyl+ +++eellde   + +a+  k++sf  P  ++y++yl++i+  L++ + P +yGLh+Naei f+t+++ek+++ l+elqpr+++++e+ g s + +++q l+di+e+++ k+fd e+l   l   e++ p+++v++qE+e+mn+l+ ei+rslkel +g+ Gelt+++++e+l ++l++d++P  Wak+a+psl++L+ wl+++  R+ qle+w+ + +  pk++w+sgl npqsfltai Q +a+kn w+Ldkl+  +ev k  + +e e+++++g+y+ G++++Garw+ ++ ++++sk+ke+++++pvi v+ v+++k++ k +y cP+Y+t +R++ t++++++lktk+++  w+l gva+++
  MMETSP1325-20131115|7753_1   1 GPMGFNMMYPFSMGDLRDSAKCLENYMESTGGGKIPWADLKYIFGEIMYGGHIVNDFDRLLANTYLDFYMKEELLDEteMYPYAEeeKGTSFMSPAPTSYANYLTHIDVaLTQDT-PIAYGLHPNAEIDFRTTASEKMFHMLIELQPRSSGASEEGGISPQAVAEQALSDIMERFAeKKFDVEDLARSL---EDQGPYQNVFMQEMEVMNVLVTEIVRSLKELTLGFAGELTMSDSMETLQDCLFLDRIPPAWAKRAWPSLMPLSLWLNNFASRLTQLEDWMGNpMELPKVTWISGLVNPQSFLTAISQVAAQKNMWELDKLCTFTEVRKWLTaDEVEAPTRDGAYIIGMSMQGARWNGNDATIEKSKPKEMFCTMPVISVRGVSVEKADFKGMYLCPCYQTLQRGP-TFIFKAQLKTKSPPGRWVLGGVAMVM 429
                 89**************************************************************************65444455598999******************9888888.************************************99999*****************9889********999...688****************************************************************************************9999******************************************9765155556899*****************************************************************.************************97 PP

>> PF06877.6  Protein of unknown function (DUF1260)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.2   3.9e-06     0.026      35      99 ..     164     227 ..     160     231 .. 0.91

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 3.9e-06
   PF06877.6  35 eedlekaaeeleksgyevesaeeseedgegvwcldveremtldyeeIdaqeeeleelaekfggey 99 
                 e+ l +++e++++++++ve++  s e ++g+++  +++em++ +  +++ ++ l el   f ge 
  MMETSP1325-20131115|7753_1 164 EQALSDIMERFAEKKFDVEDLARSLE-DQGPYQNVFMQEMEVMNVLVTEIVRSLKELTLGFAGEL 227
                 78999****************99655.8899**************************99999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.56
# Mc/sec: 1848.62
//
Query:       MMETSP1325-20131115|7759_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.28   10.4   4.9       0.38   10.0   3.4    1.2  1  PF10500.4 Nuclear RNA-splicing-associated protein
       0.46   10.6  10.4      0.041   14.0   3.3    1.8  2  PF09806.4 Cyclin-dependent kinase 2-associated protein


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.4   5.5e-05      0.38      22      73 ..      21      73 ..      14      91 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 5.5e-05
   PF10500.4 22 ssssssaksrseksrkksks.skesrkkrekkkkkrrerssssssssssssss 73
                s s+s   +++ +++++ ++  + + +  +   ++rr+rsssssss+++++++
  MMETSP1325-20131115|7759_1 21 SRSASELGRPEAQHHSRCAAgGSPGPRCAACAAAQRRRRSSSSSSSAAAAAAA 73
                34444444555555444444034467777777888888866666665555444 PP

>> PF09806.4  Cyclin-dependent kinase 2-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   3.3     6e-06     0.041      21      89 ..      11      78 ..       5      81 .. 0.68
   2 ?   -0.2   0.2      0.14   9.4e+02      76      83 ..     134     141 ..      95     144 .] 0.55

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 6e-06
   PF09806.4 21 iPrsqkknesqkqreerekqaqvesnhrgrssvsgsagssssnssalrarsskqssaaaaaaaekavaa 89
                +P++ + +++++   e   +++ ++++r  +  s+++ +++ ++++ r rss++ss+aaaaaa++a aa
  MMETSP1325-20131115|7759_1 11 VPPVRVPQFKSRSASEL-GRPEAQHHSRCAAGGSPGPRCAACAAAQRRRRSSSSSSSAAAAAAAAAAAA 78
                56666655544444443.567777777777777777778888888888888888888888888766655 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.14
   PF09806.4  76 saaaaaaa 83 
                 +aaaaaaa
  MMETSP1325-20131115|7759_1 134 AAAAAAAA 141
                 22222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       593  (0.0433733); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.59
# Mc/sec: 584.87
//
Query:       MMETSP1325-20131115|7765_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 231.08
//
Query:       MMETSP1325-20131115|7768_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 212.51
//
Query:       MMETSP1325-20131115|7760_1  [L=416]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-67  227.6   0.0    1.6e-67  227.2   0.0    1.1  1  PF01370.16 NAD dependent epimerase/dehydratase family
    1.4e-07   30.5   0.0    2.6e-07   29.7   0.0    1.3  1  PF04321.12 RmlD substrate binding domain
    3.9e-05   22.5   0.0    5.9e-05   21.9   0.0    1.2  1  PF02719.10 Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.024   14.4   0.0      0.056   13.2   0.0    1.6  1  PF13950.1  UDP-glucose 4-epimerase C-term subunit
      0.044   12.9   0.0      0.078   12.1   0.0    1.4  1  PF05368.8  NmrA-like family
      0.053   13.4   0.0       0.11   12.3   0.0    1.5  1  PF13460.1  NADH(P)-binding


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.2   0.0   7.1e-71   1.6e-67       1     235 [.      41     287 ..      41     288 .. 0.97

  Alignments for each domain:
  == domain 1    score: 227.2 bits;  conditional E-value: 7.1e-71
                 EEEE--------HHHHHHHHH-TEEEEESSCSTCCCCCCHHH............TBEEEB--TT-HHHHHHHHHHHT.SEEEE--S---HHHCCCSHHHHHHHHT---HHHHHHHHHHTT....EEEEEEEGGG---BSSSCB-TTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEE-TT...-SHHCHHHHHHHHHH---S.EEEE--TT-EEEEEEHHHHHHHHHHHHHSSS.--EEEEE CS
  PF01370.16   1 ilVtGatGfiGsalveallekgyevvnlirrtrseslatvri............rvelveldltdkdalerlfaeeqpdaVihlAaesgvdassedpadfieanvegtlnlleaarkagv...krflfasSsevygkdaeqpikEetplgplspYaaaKlageklveayaeeyglnaiilrlfnvyGprnfdeevshvipalirkilegee.vtllgdGtqlRdflyveDvaealllvlehgdvageiyni 235
                 +l+tG+tG++Gs+l+e ll+kgye  ++++ +rs+s++t ri            ++ l+++dltd+++l +++a+++pd++++l+a+s+v+ s+e  ++++ea+ +gtl+ll+a+r +g+    r+++as+se+ygk++e p +E+tp++p+spY++aK+++++++ +y+e+yg++ ++++lfn+++pr++ ++v+++i++++ +i +g + v+ lg+ +++Rd+++++D+++++++++++++  ++++++
  MMETSP1325-20131115|7760_1  41 ALITGITGQDGSYLAEFLLDKGYE--VHGIIRRSSSFNTYRIegiykdrhdedvKLFLHYGDLTDSTNLVQIIADSKPDEIYNLGAMSHVKVSFEMSEYTAEADGVGTLRLLNAIRSCGMektCRLYQASTSELYGKVREIPQTETTPFYPRSPYGVAKQYAYWMIVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVCRISRGLQdVLFLGNIDSQRDWGHARDYVKGMWMMVQRDE--PDDFVL 287
                 59**********************..888888888899999999*********999****************************************************************999***************99999********************************************************************9*******************************..998876 PP

>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   1.1e-10   2.6e-07       4     130 ..      42     198 ..      39     211 .. 0.93

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 1.1e-10
                 EEE--------HHHHHH----EEEEE--TT..........................T--TT-HHHHHHHHHHH--SEEEE------HHHHHH-HHHHHHHHT---HHHHHHHHH---....EEEEEEEGGG-----SS-B-TTS-----S----TTT CS
  PF04321.12   4 lvtGanGqlGteLaralkeegvevvaldre..........................eldltdpeavaalvkeakpdvvvnaAAytavdkaEseeeeayavnaegpenlAeaaaavga....llihiSTdyVFdGekkrpYeeddetaPlnvYGrtKl 130
                 l+tG +Gq G+ La+ l ++g+ev+ + r+                            dltd++++ +++++ kpd ++n++A   v    + +e ++++   g+ +l +a +++g+    +l + ST   +   ++ p +e+ +  P++ YG +K 
  MMETSP1325-20131115|7760_1  42 LITGITGQDGSYLAEFLLDKGYEVHGIIRRsssfntyriegiykdrhdedvklflhYGDLTDSTNLVQIIADSKPDEIYNLGAMSHVKVSFEMSEYTAEADGVGTLRLLNAIRSCGMektcRLYQASTSELYGKVREIPQTETTPFYPRSPYGVAKQ 198
                 8**************************66669***********************99*********************************999******************9999963333699********999******************9996 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   2.6e-08   5.9e-05       2     123 ..      42     161 ..      41     169 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 2.6e-08
  PF02719.10   2 lvtGagGsiGselvrqilkkkpkki.illerdElklyeiekeleeelkkeklkveivpvigdvrdkerleealeelkvdvvfhaAAlKhVPlveenpleavktNvlgtenvieaaieagvekv 123
                 l+tG +G  Gs l + +l+k  +   i+  ++ ++ y+ie   +++++ e++k++     gd++d+++l +++ + k+d +++  A+ hV +  e    + +   +gt  +++a  ++g+ek 
  MMETSP1325-20131115|7760_1  42 LITGITGQDGSYLAEFLLDKGYEVHgIIRRSSSFNTYRIEGIYKDRHD-EDVKLF--LHYGDLTDSTNLVQIIADSKPDEIYNLGAMSHVKVSFEMSEYTAEADGVGTLRLLNAIRSCGMEKT 161
                 8******************966544155666789*****998755544.466555..789******************************99888888888999999*999999999998875 PP

>> PF13950.1  UDP-glucose 4-epimerase C-term subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.5e-05     0.056      18      45 ..     342     369 ..     328     373 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2.5e-05
   PF13950.1  18 RpGDvaecyAdpskAekeLgWkaersle 45 
                 Rp+ v  ++ dp+kA+k LgW++e + e
  MMETSP1325-20131115|7760_1 342 RPTEVDLLIGDPAKAKKLLGWEPEITFE 369
                 8999999****************98876 PP

>> PF05368.8  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.4e-05     0.078       2      63 ..      42     112 ..      41     128 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.4e-05
                 EESS----HHHHHHHHHHH---EEEEE-S--.......---HHHHHHHSTTEEE..---TT-HHHHHHHH- CS
   PF05368.8   2 lviGaTGrqGksvvraslkaghkvralvRdl.......kselakslkaaGvelv..egdlddkeslvealk 63 
                 l++G TG+ G+++++++l++g++v  ++R +        + + k   ++ v+l    gdl d + lv+++ 
  MMETSP1325-20131115|7760_1  42 LITGITGQDGSYLAEFLLDKGYEVHGIIRRSssfntyrIEGIYKDRHDEDVKLFlhYGDLTDSTNLVQIIA 112
                 799************************99996776665444445555555555445566666666666665 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   4.8e-05      0.11       2      36 ..      42      76 ..      41     114 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.8e-05
   PF13460.1  2 aviGAtGktGrrivkellarghevtalvRnpsklp 36
                +++G tG+ G+ +++ ll++g+ev  ++R+ s+ +
  MMETSP1325-20131115|7760_1 42 LITGITGQDGSYLAEFLLDKGYEVHGIIRRSSSFN 76
                79999*************************99766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       400  (0.0292569); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.70
# Mc/sec: 1424.12
//
Query:       MMETSP1325-20131115|7764_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   14.8   0.5      0.025   14.1   0.3    1.3  1  PF07558.6 Shugoshin N-terminal coiled-coil region
       0.18   11.3   0.6       0.68    9.5   0.4    2.0  1  PF13152.1 Protein of unknown function (DUF3967)


Domain annotation for each model (and alignments):
>> PF07558.6  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   3.7e-06     0.025      18      41 ..     111     134 ..     110     136 .. 0.96

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.7e-06
   PF07558.6  18 alsikiselekevskLlnENvnLR 41 
                 +l+++++el++++  + nEN++LR
  MMETSP1325-20131115|7764_1 111 LLMMQVNELTSKLGTIQNENMQLR 134
                 69*********************9 PP

>> PF13152.1  Protein of unknown function (DUF3967)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.4   9.9e-05      0.68       4      18 ..      57      71 ..      55      72 .. 0.93

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 9.9e-05
   PF13152.1  4 eRDqqLmqvIREiQE 18
                 RD +L  ++RE+QE
  MMETSP1325-20131115|7764_1 57 DRDDLLVNTLRETQE 71
                6*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.53
# Mc/sec: 1455.90
//
Query:       MMETSP1325-20131115|7769_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1266.65
//
Query:       MMETSP1325-20131115|7771_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        43  (0.00314511); expected 273.4 (0.02)
Passed bias filter:                       43  (0.00314511); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.37s 00:00:00.64 Elapsed: 00:00:00.56
# Mc/sec: 141.21
//
Query:       MMETSP1325-20131115|7772_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-05   23.4   1.9      0.001   17.8   1.3    2.0  1  PF03985.8 Paf1


Domain annotation for each model (and alignments):
>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   1.3   7.4e-08     0.001     162     379 ..       5     199 ..       1     212 [] 0.65

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 7.4e-08
   PF03985.8 162 ektFeavkkdleklkHpskkklkaVeawplLPdtasmdqqfatvrfdgsaaldekekeeelkqaketaifrpveleeeefvsyylpdekdseeleekLekrsddleelddeeeeeykfkrvreYdmkvkekeeklnelalflvs.kekkvvyYkpl.esrieLrkrrvndvikklvkehnvdklnvklRnpstkeekerdklrakfdpiefeevdedeee 379
                 ek+F+   ++l     + +k+l+a  ++plLPd   + + f++v f  ++a+ + +k++        + ++pv  e +           + + ++ +    +++ +   + e ee +f++ r Y+++ k       +++ +l+   + ++v Y +   s++e r         ++ k++     +vk+ +++ +e  er++  ++ d +    + e +e 
  MMETSP1325-20131115|7772_1   5 EKSFDVPFDKL-VAASAKRKGLTAEWVMPLLPDALLWANDFVHVDFEVDPAPRDPRKRARV-AGGMLVNAKPVYNEKQ-----------QKNVVKGSFILPKEEGS---KGEHEEQEFEWERQYTVETK-----DADKNFVLMVdPDVGTVTYVEHsSSKVEFRSGL----AAAIAKKESGGTFTVKRCELTREEVLERNRNTREVDHFVALSDGEADEP 199
                 66666655533.334567899*********************************9999222.2222222344433333...........33344555555555555...56677778888999988774.....456666665547778888877525788988887....6777777788888899999999998888877777776544333332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 996.13
//
Query:       MMETSP1325-20131115|7775_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.072   12.3   0.0      0.083   12.1   0.0    1.1  1  PF01370.16 NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     6e-06     0.083     100     161 ..       2      69 ..       1      92 [. 0.79

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6e-06
                 HHHHHHHTT.EEEEEEEGGG---BSSSC.B-TTS--.--SSH....HHHHHHHHHHHHHHHHHHHT-E CS
  PF01370.16 100 leaarkagvkrflfasSsevygkdaeqp.ikEetpl.gplsp....YaaaKlageklveayaeeygln 161
                 l a+++ g++r+ f+ S   +g +a+++  +   ++ +p +     Y+++K+   +l+e++++e+g +
  MMETSP1325-20131115|7775_1   2 LSAMSEVGARRICFTDSIGSFGAEAPRQnATAAWLTqNPQQDpgsdYGRQKRGCRELMEKFRREQGGD 69 
                 67999999*********99999997777223322225333335555*****************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 594.48
//
Query:       MMETSP1325-20131115|7774_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-48  160.4   6.0    6.7e-24   83.3   0.2    3.0  3  PF00153.22 Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.015   15.4   0.0      0.025   14.7   0.0    1.4  1  PF01382.12 Avidin family


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   6.2e-05      0.43      73      95 ..       4      26 ..       1      27 [. 0.91
   2 !   69.2   0.3   2.4e-23   1.6e-19       4      93 ..      30     113 ..      28     116 .. 0.94
   3 !   83.3   0.2   9.8e-28   6.7e-24       4      93 ..     121     210 ..     118     212 .] 0.96

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 6.2e-05
                HHHHHHHHHHHHHHHHHHHH-GG CS
  PF00153.22 73 rvvpaaaikfvtyetlkkllskk 95
                +++p aa+ f++yet k++++k+
  MMETSP1325-20131115|7774_1  4 GSAPGAALFFASYETGKTFFNKN 26
                789*****************986 PP

  == domain 2    score: 69.2 bits;  conditional E-value: 2.4e-23
                 HHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH- CS
  PF00153.22   4 svlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkklls 93 
                 +++++++a+ +A ++a lv  P++vvK r+q      +  +++++ a+ +i+k+eG++gly+G++++++r++p +ai+f +ye +k + +
  MMETSP1325-20131115|7774_1  30 PAAAQMAAATFAETMACLVRVPTEVVKQRMQ------TGMFNSMFVAVPTIIKNEGVMGLYSGFGITVMREIPFSAIQFPIYERMKLVWK 113
                 5678999************************......999*********************************************97765 PP

  == domain 3    score: 83.3 bits;  conditional E-value: 9.8e-28
                 HHHHHHH----HHHCCHHHCHHHHHHHHHHH-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH- CS
  PF00153.22   4 svlksllaGaiAgaiaalvttPldvvKtrlqksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkklls 93 
                  +++ +++G+iAg ++a+vttPldv+Ktrl+  a+ ++ ky+g++d++++i+  eG  +l++G+ p+++++++   + f++ye  +k ++
  MMETSP1325-20131115|7774_1 121 APWQAAACGSIAGGFSAAVTTPLDVIKTRLMLGADAQGHKYTGTVDVVRRIVADEGAVKLFSGIQPRVMWISIGGFVFFGAYENARKAIM 210
                 68999*******************************************************************************999876 PP

>> PF01382.12  Avidin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   3.6e-06     0.025       4      56 ..     109     162 ..     106     185 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 3.6e-06
                 ---EEE----EEEEEE.-----EE-EEEES-TSSSSSCEEB-EE---BGCTSS- CS
  PF01382.12   4 egtWkNelGstlties.sseGaitGtYitaveeeageakptpltGivsnknsgt 56 
                 + +WkN  Gs l+ ++ ++ G+i G +  av++  + +k+  + G  +++++ t
  MMETSP1325-20131115|7774_1 109 KLVWKNTQGSALAPWQaAACGSIAGGFSAAVTTPLDVIKTRLMLGADAQGHKYT 162
                 568************999***********************9999986655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1036.79
//
Query:       MMETSP1325-20131115|7776_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-26   92.4   0.0    1.8e-26   92.3   0.0    1.0  1  PF12781.2 ATP-binding dynein motor region D5


Domain annotation for each model (and alignments):
>> PF12781.2  ATP-binding dynein motor region D5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   0.0   1.3e-30   1.8e-26      92     179 ..       2      91 ..       1      95 [. 0.95

  Alignments for each domain:
  == domain 1    score: 92.3 bits;  conditional E-value: 1.3e-30
   PF12781.2  92 pvldpllgrntikkg..ryikigdkeveynpkfrlilhtklanphykpelqaqatlinftvtrdgledqllaavvakerpdleklksdlt 179
                 p l+pll +++ k+g    i++gd  vey   fr+ + tkl nphy pe+  ++tl+nf++t +gledqll  vv++erpdle+ k +l 
  MMETSP1325-20131115|7776_1   2 PSLEPLLLKQVFKQGgvDCIRLGDATVEYAETFRFYITTKLRNPHYLPEISVKVTLLNFMITPEGLEDQLLGIVVSQERPDLEEQKNKLV 91 
                 89************94447*****************************************************************999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|7778_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0034   16.5   0.2     0.0051   16.0   0.1    1.2  1  PF12196.3 FHA Ki67 binding domain of hNIFK


Domain annotation for each model (and alignments):
>> PF12196.3  FHA Ki67 binding domain of hNIFK
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   3.8e-07    0.0051       3      34 ..       7      39 ..       5      39 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 3.8e-07
   PF12196.3  3 dsqdpTPVCTPtlLERRKSq.vlElndddkDDE 34
                 sq pTP   P +L   +S   + ++ddd+D E
  MMETSP1325-20131115|7778_1  7 GSQSPTPLDCPYFLDGPRSXaTADIDDDDVDGE 39
                59*************8777526899*****977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 283.65
//
Query:       MMETSP1325-20131115|7777_1  [L=312]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1557.63
//
Query:       MMETSP1325-20131115|7781_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0093   15.5   0.8          3    7.6   0.1    2.9  2  PF02493.15 MORN repeat
  ------ inclusion threshold ------
       0.26   11.0   2.4        1.7    8.4   0.0    3.0  3  PF08140.6  Crustacean cuticle protein repeat


Domain annotation for each model (and alignments):
>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.1   0.00043         3       8      23 .]      32      46 ..      31      46 .. 0.94
   2 !    5.4   0.0    0.0021        14       8      23 .]     115     129 ..     114     129 .. 0.93

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00043
                TEEE-EEEB------- CS
  PF02493.15  8 GkrhGkGvytwpdGdr 23
                Gk++G+G+  +pdG+r
  MMETSP1325-20131115|7781_1 32 GKFDGQGIT-FPDGNR 46
                99*******.****97 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0021
                 TEEE-EEEB------- CS
  PF02493.15   8 GkrhGkGvytwpdGdr 23 
                 Gk++G+G+  +pdG+r
  MMETSP1325-20131115|7781_1 115 GKFDGSGIV-FPDGNR 129
                 899*****9.****97 PP

>> PF08140.6  Crustacean cuticle protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.047   3.2e+02       4      11 ..      38      45 ..      35      47 .. 0.80
   2 ?   -2.6   0.1      0.67   4.6e+03      34      38 ..      96     100 ..      95     100 .. 0.83
   3 ?    8.4   0.0   0.00024       1.7       3      11 ..     120     128 ..     119     130 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.047
   PF08140.6  4 GiitpDGt 11
                Gi +pDG+
  MMETSP1325-20131115|7781_1 38 GITFPDGN 45
                88889985 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.67
   PF08140.6  34 dGknv 38 
                 dG+nv
  MMETSP1325-20131115|7781_1  96 DGDNV 100
                 89998 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.00024
   PF08140.6   3 SGiitpDGt 11 
                 SGi++pDG+
  MMETSP1325-20131115|7781_1 120 SGIVFPDGN 128
                 9*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 683.22
//
Query:       MMETSP1325-20131115|7782_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 493.10
//
Query:       MMETSP1325-20131115|7783_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 404.39
//
Query:       MMETSP1325-20131115|7789_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00065   19.2   0.0    0.00086   18.8   0.0    1.1  1  PF10208.4  Degradation arginine-rich protein for mis-folding
  ------ inclusion threshold ------
       0.02   14.3   0.1      0.032   13.6   0.1    1.4  1  PF02037.22 SAP domain
      0.096   12.8   0.1        0.1   12.8   0.0    1.1  1  PF14303.1  No apical meristem-associated C-terminal domain


Domain annotation for each model (and alignments):
>> PF10208.4  Degradation arginine-rich protein for mis-folding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   1.9e-07   0.00086     101     138 ..      51      88 ..      47      94 .. 0.91

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 1.9e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF10208.4 101 tvdlkklkvkelkkilaeWgeeckgcleksdfikkiee 138
                  v+ +k+ vk lk+ l++ g   +gc+ek ++i++  e
  MMETSP1325-20131115|7789_1  51 RVEASKMGVKALKEKLRSMGVRIDGCTEKRELIELYAE 88 
                 57889****************************98765 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1     7e-06     0.032       2      34 ..      55      89 ..      54      89 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 7e-06
                TT--HHHHHHHHHHTT------..HHHHHHHHHHH CS
  PF02037.22  2 skltVaeLKaeLkkrGLptsGk..KaeLieRLkeh 34
                sk+ V+ LK++L+++G ++ G   K eLie + eh
  MMETSP1325-20131115|7789_1 55 SKMGVKALKEKLRSMGVRIDGCteKRELIELYAEH 89
                68889***************988888888877665 PP

>> PF14303.1  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.2e-05       0.1      37      84 ..      31      78 ..      16      98 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.2e-05
   PF14303.1 37 nsskatnsseenedeeeeeteerkRpeGrKkaKeklrrgvekkeklkk 84
                ++ +++ns ++++ +e ++   ++  +G+K+ Keklr ++     + +
  MMETSP1325-20131115|7789_1 31 SQASTSNSGHDGAGDERAQRRVEASKMGVKALKEKLRSMGVRIDGCTE 78
                44455566688999999999999**************99444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 452.14
//
Query:       MMETSP1325-20131115|7788_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   15.0   0.3      0.025   14.3   0.0    1.4  2  PF03372.18 Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> PF03372.18  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.8e-06     0.025     160     251 .]       9     115 ..       2     115 .. 0.69
   2 ?   -3.1   0.0      0.38   5.1e+03     193     216 ..     121     144 ..     116     150 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.8e-06
                 SEEEE---S--BSSGH....................TTTBHHHHHSH....HCBHBCCHHHHCBTT-C--SB--TC-TTTCCCHHB--S--EEBHHHCCCCEEEEECTHHCHSSSS CS
  PF03372.18 160 pvilaGDfNsrpdspd....................kgfrenaadfl....pgdgfddglrallphlllptspgttdtyekageparlDyilvssgwpalvvsgalllpdrggSDH 251
                  v++ GDfN+  +                       ++++e+   f+    p+++++d +++  ++++++ s+g+ +      +++ +D+ l+ s+ + +  ++   ++ ++ SDH
  MMETSP1325-20131115|7788_1   9 AVVIGGDFNTHNHGLArlskkmsgaegfsgfgkteaQWWEEEI--FAksgePENRLCDPFHKSDDSHNTWISVGPITV-----WGGKIDWLLY-STATLTCMTQFISEGNVS-SDH 115
                 389999***8777777************999997754444333..335668888889999888888887777776664.....3349******.444444444444444444.999 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 0.38
                 CHHHHCBTT-C--SB--TC-TTTC CS
  PF03372.18 193 dglrallphlllptspgttdtyek 216
                 d +r+++  +  pt+p+ td + +
  MMETSP1325-20131115|7788_1 121 DLFRKMPTLNADPTDPTNTDFNGP 144
                 566777666667777777766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 924.31
//
Query:       MMETSP1325-20131115|7784_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-30  105.0   0.2    3.1e-30  104.4   0.1    1.2  1  PF05995.7 Cysteine dioxygenase type I
     0.0016   17.6   0.1     0.0022   17.2   0.1    1.2  1  PF07847.7 Protein of unknown function (DUF1637)


Domain annotation for each model (and alignments):
>> PF05995.7  Cysteine dioxygenase type I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.4   0.1   4.6e-34   3.1e-30      12     175 .]      65     252 ..      57     252 .. 0.84

  Alignments for each domain:
  == domain 1    score: 104.4 bits;  conditional E-value: 4.6e-34
   PF05995.7  12 vkkastladlvaqllqifrqkeadveevakllerles...dltewgkyvrf...dqtkytrnliagngelellllswvpgqgtevHDHggslgalkvleGeLketifawrrk.................rlvplviksrsrlldegt..qlvfdkggvHrvenesasepavslHlYsPPltemtafees 175
                 +++ +tl+ lv  l+  +r +  ++++v ++++++e+     +e +k + +   ++++ytrnli+gn++++ +l++w+ g  +++HDH +s++ ++ +eG+++e ++a +                   +  +l+i+++ +l  +g+  +++++++g+Hrven  +++ a +lH+Y+PPl++m++f+e+
  MMETSP1325-20131115|7784_1  65 MPSCHTLESLVDYLKVNVRGHDHTAHDVRAVSKEMEKwfpRESEYQKHITLcpdNPKQYTRNLIYGNENFDCILMCWPAGAVSSIHDHEESSCWVVAVEGTVHEVQYAMPMLdkkflqaektdpanavgTCGKLKIVNVAELDTGGVtgTYANNEIGIHRVENR-TDKLACTLHVYAPPLKKMRIFNEQ 252
                 566777888888888888777666666555555555511167899999887666899*****************************************************9999**************97777777777777777763369**********665.5********************986 PP

>> PF07847.7  Protein of unknown function (DUF1637)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   3.3e-07    0.0022      27     145 ..     119     245 ..      85     271 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 3.3e-07
   PF07847.7  27 saapvtylhiyetekfslgiFvlppgsviPLHdHPgMtvlskvlyGsvhvkSydwve......evketteakek..lrlaklvvdeevtaesktsvLtPteggnlHeitait.gpaaflDvlaPPYde 145
                 + ++ t   iy +e+f   + + p+g+v  +HdH +   +   + G+vh   y          ++++t+ a+     ++ k+v  +e  +    +  + ++   +H++++ t + a  l v aPP ++
  MMETSP1325-20131115|7784_1 119 NPKQYTRNLIYGNENFDCILMCWPAGAVSSIHDHEESSCWVVAVEGTVHEVQYAMPMldkkflQAEKTDPANAVgtCGKLKIVNVAEL-DTGGVTGTYANNEIGIHRVENRTdKLACTLHVYAPPLKK 245
                 5567778889***************************************998887665565553333333333333444444444444.445555556666699*******9889999*******875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 1496.59
//
Query:       MMETSP1325-20131115|7787_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.50
# Mc/sec: 1715.79
//
Query:       MMETSP1325-20131115|7795_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|7793_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-30  106.5   0.4    1.6e-30  106.3   0.3    1.1  1  PF00504.16 Chlorophyll A-B binding protein
  ------ inclusion threshold ------
       0.12   11.8   0.3       0.23   10.9   0.2    1.5  1  PF02944.15 BESS motif


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.3   0.3   2.3e-34   1.6e-30       5     154 ..      35     191 ..      31     193 .. 0.75

  Alignments for each domain:
  == domain 1    score: 106.3 bits;  conditional E-value: 2.3e-34
                 XXXXXXXXXX.XXXXXX....----TTTTT--------TTT------------------S--TT--.STT--.....---...--S-TT.THHHH---HHHHHHHHTT---------------..---------.-----------STTT----TTTTT------ CS
  PF00504.16   5 ldgslpgdlg.fDplgls...kdptlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeag.....gls...lptllalqillligflelareqelkapesegsekraypGg..lgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvq 154
                 l++ ++++ g fDplg+    +d++ +++r+aE++HGRvAM a++G++v  ++++l++  + a+++++++       + +   +p+l+ +qil+l g +el +e e+++   +   k ++ G   l f   +++  +ee+ka+l+lkE++nGRlAM++++gf+++
  MMETSP1325-20131115|7793_1  35 LTEGIIAPTGkFDPLGIMdmgSDASNAWMRHAEVKHGRVAMFAFVGFIVSANGIHLPG--EIATGVSFESISklkplE-QwnaVPALGQIQILTLLGCFELLSEMEKPH--YM---KGGKTGVipLIFAAPQMKaLSEEKKADLRLKELQNGRLAMVGIMGFFAA 191
                 65568999999******9554555*****************************99654..334444444322132221.13359999**************97766554..33...34444432244555577789**************************986 PP

>> PF02944.15  BESS motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   3.3e-05      0.23      12      29 ..     156     173 ..     155     176 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.3e-05
  PF02944.15  12 lPtlkrLsprqklkfKie 29 
                 +P++k Ls ++k++++ +
  MMETSP1325-20131115|7793_1 156 APQMKALSEEKKADLRLK 173
                 7**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 963.24
//
Query:       MMETSP1325-20131115|7792_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-17   63.7   0.0    1.7e-17   63.2   0.0    1.2  1  PF00270.24 DEAD/DEAH box helicase
    5.8e-13   48.9   0.0    8.1e-13   48.4   0.0    1.1  1  PF04851.10 Type III restriction enzyme, res subunit
    0.00086   18.8   0.0     0.0024   17.4   0.0    1.8  1  PF13245.1  Part of AAA domain
  ------ inclusion threshold ------
      0.011   14.5   0.0      0.013   14.3   0.0    1.3  1  PF00437.15 Type II/IV secretion system protein
      0.021   14.8   0.1      0.099   12.6   0.1    2.0  1  PF13401.1  AAA domain
      0.079   11.8   0.0       0.13   11.0   0.0    1.3  1  PF09848.4  Uncharacterized conserved protein (DUF2075)
       0.11   12.8   0.0       0.44   10.7   0.0    2.1  1  PF13191.1  AAA ATPase domain
       0.12   12.0   0.0       0.28   10.8   0.0    1.5  1  PF01935.12 Domain of unknown function DUF87
       0.14   11.3   0.1        1.4    8.0   0.0    2.1  2  PF12846.2  AAA-like domain


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.2   0.0   1.1e-20   1.7e-17       3     167 ..      94     255 ..      92     260 .. 0.74

  Alignments for each domain:
  == domain 1    score: 63.2 bits;  conditional E-value: 1.1e-20
                 HHHHHHHHHHSS-EEEEEC-TT---HHHHHHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHHHTTT.SS.EEEEE......TTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHH..CCH.HTTT.EEEEEECTHHHHHCTTTHHHHHHHHHHSHHTTTSEEEEEESS-T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00270.24   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqilletlkkttikkalivaPtreLaeqtlnnlkkfkky.pklrvlli......iggvalardqlsvldngvdivvgTpgrlddlvst..gkl.nlsq.vrllVlDEadrllsqgfsdqlnqilqilcdgkrlqvivlSATlp 167
                  Q+e+i+++ ++ ++lv a+T+sGKT +++  +++++l+   k+ +  +++v+Pt++L++q++ +l   +++ p  +v ++      ig  + a d+ +v ++++++++  p+ l  l+ +  + l    + +r+ ++DE+++l +   ++ ++++l +l  +  ++ ++lSATl 
  MMETSP1325-20131115|7792_1  94 WQWEMIQAADRDASLLVTAPTSSGKTFIASY-IIRKVLR---KDPSGVVVFVLPTKALVNQCYAELMLDTEEiPTAEVGVVktvrdsIGVFT-A-DT-KVNNEKANVLICVPQILNILLTSpqRALdGWHErLRYAIVDEVHKLED---EEAYEHLLHLL--P--CPYVALSATLG 255
                 59999**9999999****************6.6666766...346889*****************955444445555555544444333332.3.33.3336678999999999998888855444444556**************...66777788776..4..789******97 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.0   5.3e-16   8.1e-13       7     182 ..      94     254 ..      85     256 .. 0.80

  Alignments for each domain:
  == domain 1    score: 48.4 bits;  conditional E-value: 5.3e-16
  PF04851.10   7 yQeeaienllesiekedekkrglivmaTGtGKTlvaasliarlar.....kflflvprkelleqaleefkkfeskkiefekkniavakkdklfgeeqkkskdkeekkkkdkeiilttiqklhkaleeeeendeskseslealldefdviiiDEaHrlsakkkyreilefkkafllglTATp 182
                 +Q+e+i++        d+ +++l+ ++T +GKT++a  +i +++r      ++f+ p+k+l++q + e+     +  e++++++      k++ ++ ++++   + +++++++++   q l+  l++       +++ l+  +++  + i+DE+H+l +++ y+ +l + +   + l+AT 
  MMETSP1325-20131115|7792_1  94 WQWEMIQAA-------DRDASLLVTAPTSSGKTFIASYIIRKVLRkdpsgVVVFVLPTKALVNQCYAEL---MLDTEEIPTAEV---GVVKTVRDSIGVFTADTKVNNEKANVLICVPQILNILLTS-------PQRALDGWHERLRYAIVDEVHKLEDEEAYEHLLHLLPCPYVALSATL 254
                 555555544.......46789****************************99******************...222233333333...3445566777888888888889999999999999999876.......4478999999999*********************6666679999996 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.6e-06    0.0024       3      60 ..      99     153 ..      97     174 .. 0.75

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.6e-06
   PF13245.1   3 veaala.gnpllvvtGgPGtGKTttlaaiiaallaarekp.grsvllvaptgraakrlse 60 
                 ++ a++  ++llv t++  +GKT  +  ii+ +l  r++p g  v++v pt + + +  +
  MMETSP1325-20131115|7792_1  99 IQ-AADrDASLLV-TAPTSSGKTFIASYIIRKVL--RKDPsG-VVVFVLPTKALVNQCYA 153
                 66.6665778877.*********99999999999..667755.67777899888877644 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   8.5e-06     0.013     119     155 ..      97     132 ..      23     175 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 8.5e-06
  PF00437.15 119 evlrqavqargnilvsGgTgsGKttllnallaeinkd 155
                 e++++a  +  ++lv+ +T+sGKt +++ ++ ++  +
  MMETSP1325-20131115|7792_1  97 EMIQAA-DRDASLLVTAPTSSGKTFIASYIIRKVLRK 132
                 667777.9999*************9997777766444 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   6.5e-05     0.099       5     110 ..     106     242 ..     101     255 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.5e-05
   PF13401.1   5 gilvvtGesGvGKTtllrrlarqldeeaeaae...............karvvfveapastspkellqkllsalglpakg........................rltteellealqealrrrrt..........rlliiDEaqrL.seealeelrsl 110
                  +l+vt+++ +GKT+ + ++ r+  ++  +                                     +l    ++ + +                        +++   ++ ++++ l +  +          r  i+DE++ L  eea+e+l +l
  MMETSP1325-20131115|7792_1 106 ASLLVTAPTSSGKTFIASYIIRKVLRKD-PSGvvvfvlptkalvnqcY------------------AELMLDTEEIPTAevgvvktvrdsigvftadtkvnneKANVLICVPQILNILLTSPQraldgwherlRYAIVDEVHKLeDEEAYEHLLHL 242
                 5789*****************9875432.2224555555444444440..................4444444433333555555555555555555555555477777776666666666666888888899***********559999999776 PP

>> PF09848.4  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   8.7e-05      0.13      12      98 ..     116     233 ..     106     248 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 8.7e-05
   PF09848.4  12 tGKtvvalnllaeledseeertavflsgNhplvkvlrealakkl......ekkkkkeavkkpssfinnls................................kaekkkpkedvvivDEAhrlltk 98 
                 +GKt +a+ ++ ++ +++     vf++  ++lv+  + +l  ++      e       v  ++++ +++                                   +  +++++ +ivDE h+l ++
  MMETSP1325-20131115|7792_1 116 SGKTFIASYIIRKVLRKDPSGVVVFVLPTKALVNQCYAELMLDTeeiptaE-------VGVVKTVRDSIGvftadtkvnnekanvlicvpqilnilltspqrALDGWHERLRYAIVDEVHKLEDE 233
                 8***************************************99995533332.......3333333333334446666888889999999999999999998877888999999999999999884 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00029      0.44      21      66 ..     104     157 ..      96     251 .. 0.57

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00029
   PF13191.1  21 egsplllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn.............l 66 
                 +   +llvt p  +GK+ ++      i+++ lr+++++++ +                l
  MMETSP1325-20131115|7792_1 104 RDA-SLLVTAPTSSGKTFIASY----IIRKVLRKDPSGVVVFVLPtkalvnqcyaelmL 157
                 333.8*****************....777777778888887776633334433333330 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00019      0.28      26      58 ..     108     140 ..     105     140 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00019
  PF01935.12  26 lAilgsTGsGKSntvavLleellekkgatilil 58 
                 l++ + T sGK++ ++++++++l+k+ + ++++
  MMETSP1325-20131115|7792_1 108 LLVTAPTSSGKTFIASYIIRKVLRKDPSGVVVF 140
                 67899999****************999999998 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0009       1.4       3      34 ..     107     138 ..     105     144 .. 0.85
   2 ?    0.9   0.0      0.13   1.9e+02     232     260 ..     207     234 ..     188     241 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0009
   PF12846.2   3 ntlilGppGsGKSvllkklvlqllargprvvi 34 
                 + l+++p+ sGK++ + ++++ +l+++p  v+
  MMETSP1325-20131115|7792_1 107 SLLVTAPTSSGKTFIASYIIRKVLRKDPSGVV 138
                 789****************9999998865554 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.13
   PF12846.2 232 aarrnfrapkdlrdkllviDEahrllgsp 260
                   +r+++  ++++ ++ ++DE+h+l + +
  MMETSP1325-20131115|7792_1 207 SPQRALDGWHERL-RYAIVDEVHKLEDEE 234
                 4445555555556.99********98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.62u 0.34s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1308.78
//
Query:       MMETSP1325-20131115|7796_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0017   18.1   0.0     0.0019   17.9   0.0    1.1  1  PF13671.1 AAA domain


Domain annotation for each model (and alignments):
>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.4e-07    0.0019      99     137 ..       2      40 ..       1      47 [. 0.69

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.4e-07
   PF13671.1  99 vrivylevpeetlreRlakRerngd.drsevpeealdrml 137
                 v +++++v++  +++R+++R+++++ +      + + ++ 
  MMETSP1325-20131115|7796_1   2 VYAIWFNVSKNICADRVRQRADHEGgVNGSE-GAKVVQFT 40 
                 5789******************974144333.33344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|7798_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 380.85
//
Query:       MMETSP1325-20131115|7799_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|7802_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 380.60
//
Query:       MMETSP1325-20131115|7801_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 685.36
//
Query:       MMETSP1325-20131115|7804_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 253.73
//
Query:       MMETSP1325-20131115|7803_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|7791_1  [L=568]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   15.1   0.0      0.044   13.8   0.0    1.6  1  PF00536.25 SAM domain (Sterile alpha motif)
       0.04   13.6   0.0      0.074   12.7   0.0    1.4  1  PF13543.1  SAM like domain present in kinase suppressor RAS 1
      0.076   13.1   0.0       0.32   11.1   0.0    2.0  2  PF00730.20 HhH-GPD superfamily base excision DNA repair protein


Domain annotation for each model (and alignments):
>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   9.7e-06     0.044       7      45 ..     310     348 ..     307     357 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 9.7e-06
                 SHHHHHHHTT-GGGHHHHHCT--SHHHHTT--HHHHHHH CS
  PF00536.25   7 dVgeWLesiglgqYvdnFrageidgdallllteedLekl 45 
                 ++geW+++ gl+ Y+++  a    ++ l+++t++d  +l
  MMETSP1325-20131115|7791_1 310 SLGEWIDANGLSSYKEQICAYAAELHDLTEMTDDDVDEL 348
                 689***************99999************8774 PP

>> PF13543.1  SAM like domain present in kinase suppressor RAS 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.6e-05     0.074      57     128 ..     299     369 ..     288     370 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.6e-05
   PF13543.1  57 reraaeLqeypkleqwLrvvglsqetieailkklltleqlLemsdeelkeilekvgaeeeevrrllaalknL 128
                  e  ++++e  +l +w+   gls+ +  +i++    l++l em+d+++ e+++++g+ +   rrl +a+++L
  MMETSP1325-20131115|7791_1 299 MEYVKKMEEAGSLGEWIDANGLSSYKE-QICAYAAELHDLTEMTDDDVDELINESGMPKLAGRRLKKAISEL 369
                 45567788889999********99875.566999**********************************9887 PP

>> PF00730.20  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.83   3.8e+03      19      51 ..      78     104 ..      69     115 .. 0.63
   2 ?   11.1   0.0   7.1e-05      0.32      39      89 ..     331     381 ..     311     461 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.83
                 HHHHHHTSSBCECET.T.EEB.HCSHHHHHHS-HH CS
                 xxxxxxxxxxxxxxxxx.xxx.xxxxxxxxxxxxx RF
  PF00730.20  19 krlverygnalddieig.tfh.fptpedladadee 51 
                 ++ ve+         i  ++h +   +++ad+de 
  MMETSP1325-20131115|7791_1  78 AEAVEKA--------IHkAIHeSSRMQAMADLDEG 104
                 3333332........13367888889999999865 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 7.1e-05
                 HCSHHHHHHS-HHHHHHHHTT.-SHHHHHHHHHHHHHHHHS-SSS--TTSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00730.20  39 fptpedladadeeelrelikelGfynrkakyikelarilvgrpdvlpvvDv 89 
                    ++dl++++ +++ eli e G+++   +++k++  +l+g +   pv D 
  MMETSP1325-20131115|7791_1 331 AAELHDLTEMTDDDVDELINESGMPKLAGRRLKKAISELAGAQVTRPVGDS 381
                 6789*********************99999999999999943333444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       559  (0.0408865); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.94u 0.35s 00:00:01.29 Elapsed: 00:00:00.59
# Mc/sec: 2307.00
//
Query:       MMETSP1325-20131115|7806_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|7808_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-16   59.7   0.0    1.3e-06   28.2   0.1    3.2  3  PF00412.17 LIM domain
  ------ inclusion threshold ------
        0.4   10.0   0.1        0.4   10.0   0.1    2.5  3  PF11238.3  Protein of unknown function (DUF3039)


Domain annotation for each model (and alignments):
>> PF00412.17  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   7.8e-05      0.53      25      58 .]      25      58 ..       8      58 .. 0.89
   2 !   17.8   0.0   3.3e-07    0.0022      12      57 ..      74     119 ..      67     120 .. 0.85
   3 !   28.2   0.1   1.9e-10   1.3e-06       1      58 []     123     188 ..     123     188 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 7.8e-05
                CC-B-TTT-SB-----EEEETTEEEEHHHHHHHH CS
  PF00412.17 25 eCFtCseCqkplkeksffekdgklyCkkdylkkf 58
                + F+Cs+ +++l +++f++++gk++ +k yl++f
  MMETSP1325-20131115|7808_1 25 NEFVCSVTGESLLDQDFVIHNGKPFSRKAYLDQF 58
                569*************************999986 PP

  == domain 2    score: 17.8 bits;  conditional E-value: 3.3e-07
                 SCEEEETTEEEECCC-B-TTT-SB-----EEEETTEEEEHHHHHHH CS
  PF00412.17  12 elvlkaldkvyHeeCFtCseCqkplkeksffekdgklyCkkdylkk 57 
                 + v+ a++ ++ +e F+C+  +kpl+ ++f++k gk+y  + y++k
  MMETSP1325-20131115|7808_1  74 DNVVLAMGYKWKIENFRCAGTGKPLNFEQFMVKGGKPYSVEAYVEK 119
                 445569********************************88888876 PP

  == domain 3    score: 28.2 bits;  conditional E-value: 1.9e-10
                 -TTT-----.TTSCEEEETTEEEECCC-B-TTT-SB-----.EEEETT......EEEEHHHHHHHH CS
  PF00412.17   1 CagCnkkia.drelvlkaldkvyHeeCFtCseCqkplkeks.ffekdg......klyCkkdylkkf 58 
                 C  Cn+++a  ++  ++ ++  +H ++F+C+  ++ lk+++ ++ kd       ++yC+k y+++f
  MMETSP1325-20131115|7808_1 123 CPTCNETVAlGDDSAIEWMGMIFHADHFQCAGTGCVLKQGDkVYAKDLgdgmgpRPYCEKAYAEQF 188
                 99******995666668*************************9999843335567*******9876 PP

>> PF11238.3  Protein of unknown function (DUF3039)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.56   3.8e+03      23      36 ..      72      85 ..      60      87 .. 0.78
   2 ?   10.0   0.1   5.9e-05       0.4      32      53 ..     108     129 ..     103     131 .. 0.89
   3 ?   -0.8   0.6      0.14   9.7e+02      42      48 ..     186     193 ..     178     194 .] 0.73

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.56
   PF11238.3 23 sGkpvvALCGkvwv 36
                +G+ vv   G++w 
  MMETSP1325-20131115|7808_1 72 KGDNVVLAMGYKWK 85
                68888877888886 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 5.9e-05
   PF11238.3  32 GkvwvpsrdpkkfPvCpeCkei 53 
                 Gk + ++   +kf vCp+C+e 
  MMETSP1325-20131115|7808_1 108 GKPYSVEAYVEKFRVCPTCNET 129
                 8889999999*********985 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.14
   PF11238.3  42 kk.fPvCp 48 
                 ++  PvCp
  MMETSP1325-20131115|7808_1 186 EQfCPVCP 193
                 56469998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 948.76
//
Query:       MMETSP1325-20131115|7811_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 878.66
//
Query:       MMETSP1325-20131115|7812_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0044   16.8   0.4        5.5    6.8   0.1    3.3  2  PF02861.15 Clp amino terminal domain


Domain annotation for each model (and alignments):
>> PF02861.15  Clp amino terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.1    0.0004       5.5      27      44 ..      26      43 ..       2      47 .. 0.66
   2 !    5.6   0.0   0.00095        13       1      21 [.      60      80 ..      60      86 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0004
                TSHHHHHHHHTT--HHHH CS
  PF02861.15 27 dgiaariLkkaGvdleal 44
                +++a + Lkk Gv++e +
  MMETSP1325-20131115|7812_1 26 ESTAVKFLKKRGVTKESV 43
                358***********9987 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.00095
                HHHHHHHTTBSEE-HHHHHHH CS
  PF02861.15  1 AqelAkelgdqyistEHLLLA 21
                Aqe A +l+   ++tE LL+A
  MMETSP1325-20131115|7812_1 60 AQERAHQLNKPVVGTEDLLWA 80
                9***************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 693.95
//
Query:       MMETSP1325-20131115|7805_1  [L=396]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.3    9.8   3.5       0.43    9.3   2.4    1.1  1  PF04929.7 Herpes DNA replication accessory factor
       0.33   10.0  24.2       0.51    9.3  16.7    1.3  1  PF11593.3 Mediator complex subunit 3 fungal
       0.34   10.7   6.3       0.61    9.9   4.4    1.4  1  PF10146.4 Zinc finger-containing protein


Domain annotation for each model (and alignments):
>> PF04929.7  Herpes DNA replication accessory factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.4   9.4e-05      0.43     291     364 ..      81     153 ..      65     165 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 9.4e-05
   PF04929.7 291 sseeknaeeeeatasvsdklreksedsspspPktsesdleeeteeeaslsakpsaalerplasslkrkreaek..k 364
                  + +k ae++++t ++  ++  + ++++p+pP+ s+s+l+++t+ +a+ + ++s++ +r    + +rk++++   +
  MMETSP1325-20131115|7805_1  81 AKLSKSAEAPTPTPTMLTTPTPTPNAAPPPPPSLSVSALAASTPAAAVGTTSNSSKKKRR---QRQRKKHTSDeiE 153
                 55566777888899999999***********************99999999999888886...7777777665232 PP

>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  16.7   0.00011      0.51     119     220 ..      65     164 ..      48     261 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00011
   PF11593.3 119 yaktgkasasasttkksaksnaattsstanTpaaasvkkansasaPnatagvGsaattaaisattattptttakkprkprqtkkaaaaakkqasaqaqaqas 220
                 +a    a+a ++  +  + s++a +++ ++T+  +++ ++n+a+ P ++ +v  +a +a+++a++  t+  + kk+r+ rq kk  +   +q + q+ a  +
  MMETSP1325-20131115|7805_1  65 AAPVCGATAGVALATGAKLSKSAEAPTPTPTMLTTPTPTPNAAPPPPPSLSV--SALAASTPAAAVGTTSNSSKKKRRQRQRKKHTSDEIEQIQKQSPAMQA 164
                 4444455666677777788899999999999999************998888..666777999999999999************777777774444433222 PP

>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.4   0.00013      0.61     128     194 ..      86     162 ..      46     167 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00013
   PF10146.4 128 karsplepeasvtalPssssgflpPpapselsallaaalaaaalrlkk...........gpsvrsdfnvnlrqqpPPm 194
                 +a++p+ +  ++ ++P ++++  pPp+ps + + laa   aaa+ +++             +  sd   ++++q+P m
  MMETSP1325-20131115|7805_1  86 SAEAPTPTP-TMLTTPTPTPNAAPPPPPSLSVSALAASTPAAAVGTTSnsskkkrrqrqRKKHTSDEIEQIQKQSPAM 162
                 455555444.7888999999*********9999999999999998888555555555542333333333445566666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       807  (0.0590257); expected 273.4 (0.02)
Passed bias filter:                      471  (0.03445); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.39s 00:00:01.22 Elapsed: 00:00:00.50
# Mc/sec: 1897.91
//
Query:       MMETSP1325-20131115|7813_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 198.94
//
Query:       MMETSP1325-20131115|7807_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 225.54
//
Query:       MMETSP1325-20131115|7815_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       663  (0.0484933); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 484.26
//
Query:       MMETSP1325-20131115|7814_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0077   15.7   1.9     0.0079   15.6   1.3    1.1  1  PF04156.9  IncA protein
  ------ inclusion threshold ------
       0.14   11.4   0.3       0.14   11.3   0.2    1.1  1  PF13567.1  Domain of unknown function (DUF4131)
       0.14   11.6   3.2       0.18   11.3   2.2    1.1  1  PF11026.3  Protein of unknown function (DUF2721)
        1.2    7.7   5.5        1.5    7.5   3.8    1.1  1  PF12679.2  ABC-2 family transporter protein
        4.2    7.1   6.9       0.35   10.6   0.8    2.0  2  PF00746.16 Gram positive anchor


Domain annotation for each model (and alignments):
>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   1.3   2.9e-06    0.0079      12      73 ..       4      62 ..       2      98 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 2.9e-06
   PF04156.9 12 iilgllliasGiallvlfasslgvlisallgivliAlgvvLlalgllllllkapvqseedek 73
                +++++  i++G a+l+     +gv+ +++ + v   lg++ la++ll+++++a++  e +++
  MMETSP1325-20131115|7814_1  4 TAVSVQAICLGLAVLISV---FGVAQATAHSPVGSLLGLIFLAGVLLVFFSRACSKRELRQD 62
                566666677777775555...99999999999999999999999999999999988776665 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   5.3e-05      0.14      11      65 ..       5      57 ..       1      98 [. 0.68

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 5.3e-05
   PF13567.1 11 slplgllllalllalllllllflkrrkrrrlllllglllllaglylllrapqpss 65
                 +++++++l+l++++ ++++       ++    llgl++l+++l++++  ++ ++
  MMETSP1325-20131115|7814_1  5 AVSVQAICLGLAVLISVFGVAQA--TAHSPVGSLLGLIFLAGVLLVFFSRACSKR 57
                56677777777777777777764..666777777777777777777666655544 PP

>> PF11026.3  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.2   6.4e-05      0.18      65     121 ..       5      61 ..       2      69 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 6.4e-05
   PF11026.3  65 aillatlsallivlvilllflsallelelslavailFilallllilslllflrEirl 121
                 a+++ ++++ l+vl++++   +a+++  + +++ ++F++++ll+++s +++ rE+r 
  MMETSP1325-20131115|7814_1   5 AVSVQAICLGLAVLISVFGVAQATAHSPVGSLLGLIFLAGVLLVFFSRACSKRELRQ 61 
                 55566666667777777777789999****************************985 PP

>> PF12679.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.8   0.00054       1.5     127     168 ..       9      50 ..       1      55 [. 0.84

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00054
   PF12679.2 127 lliailatvlltlvviaalgislalgdlllllllsvllllav 168
                  +i+++++vl++++++a+ + + + g+ll l++l+++ll+++
  MMETSP1325-20131115|7814_1   9 QAICLGLAVLISVFGVAQATAHSPVGSLLGLIFLAGVLLVFF 50 
                 79*********************************9777633 PP

>> PF00746.16  Gram positive anchor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.3      0.47   1.3e+03      23      32 ..      13      22 ..       2      26 .. 0.67
   2 ?   10.6   0.8   0.00013      0.35      17      38 ..      31      52 ..      28      53 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.47
                XXXXXXXXXX CS
  PF00746.16 23 aGlllaaggg 32
                +Gl+++++++
  MMETSP1325-20131115|7814_1 13 LGLAVLISVF 22
                5666666554 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00013
                XXXXXXXXXXXXXXXXXXXXXX CS
  PF00746.16 17 nifltlaGlllaaggglllvkr 38
                +++  l+Gl+++ag++l++++r
  MMETSP1325-20131115|7814_1 31 SPVGSLLGLIFLAGVLLVFFSR 52
                67889**************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       561  (0.0410328); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 594.10
//
Query:       MMETSP1325-20131115|7809_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 898.63
//
Query:       MMETSP1325-20131115|7816_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       554  (0.0405208); expected 273.4 (0.02)
Passed bias filter:                      483  (0.0353277); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.42s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 632.64
//
Query:       MMETSP1325-20131115|7818_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 422.89
//
Query:       MMETSP1325-20131115|7819_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|7817_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-20   71.7   0.0    4.2e-20   71.4   0.0    1.2  1  PF02847.12 MA3 domain


Domain annotation for each model (and alignments):
>> PF02847.12  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.0   3.1e-24   4.2e-20       1     112 [.      41     152 ..      41     153 .. 0.98

  Alignments for each domain:
  == domain 1    score: 71.4 bits;  conditional E-value: 3.1e-24
  PF02847.12   1 lkrkiflileeylssgdyeeavskleeLklpkqhheivkillecaleekktyneyyalLlsklceknlisskqfekgfsrvlesledleldipeairnlaeflarliaedil 112
                 +k+k+++i+eey+s+ d++ea ++++eL++p+ h  +v + + +   +k ++ e ++ L   l+ +++ +++q+ekg+ +++e l+d+e+d+p a + la ++a++i+++++
  MMETSP1325-20131115|7817_1  41 FKSKAKSIVEEYFSIVDLKEATECVQELNSPEHHWVLVTESIDIGFSKKEKECEQVGDLWVALYNAGVLTTEQLEKGLFDIIEFLPDMEIDVPMAGKWLAIMMAKCIVAGAI 152
                 799*********************************************************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1095.48
//
Query:       MMETSP1325-20131115|7821_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 539.18
//
Query:       MMETSP1325-20131115|7822_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1139.49
//
Query:       MMETSP1325-20131115|7824_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.27   11.1   1.7       0.61   10.0   1.2    1.5  1  PF04695.8 Peroxisomal membrane anchor protein (Pex14p) conserved region
        6.5    4.3   7.3          7    4.2   5.0    1.0  1  PF05642.6 Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> PF04695.8  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.2   8.9e-05      0.61      52     125 ..      36     120 ..      16     126 .. 0.49

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 8.9e-05
   PF04695.8  52 a...tsstaateaaqstsesstpsdnysnqsssssststpqsqqsyyqqppplvper...........dwrdllimataaaglgygly 125
                     ts +++ +++++ +    p  + s q+++  ++ ++ +++ +y++ppp++p                 + + +t ++  g++ y
  MMETSP1325-20131115|7824_1  36 PastTSISTTGTSTATATFGAAPRCALSYQPPPGGYQYQSTQSYAPYSAPPPPPPSEegvlgtglpmvF---WALALTSLGLWGSSSY 120
                 122233333333333333344444444555555555666666666677888887554577777773333...3333333333333333 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   5.0     0.001         7     263     309 ..      17      61 ..      11      90 .. 0.71

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.001
   PF05642.6 263 vGvpGvrvgaatssssttspssstttttpassgpsaqgshgsssrna 309
                 v ++  r+g+a sssst++p+s+t+ +t+ +s+  a  + g+++r a
  MMETSP1325-20131115|7824_1  17 VALAAPRIGTAGSSSSTAAPASTTSISTTGTST--ATATFGAAPRCA 61 
                 566666777777777776666555555554444..555666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 625.99
//
Query:       MMETSP1325-20131115|7823_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   56.5   0.0    1.9e-15   56.1   0.0    1.2  1  PF00957.16 Synaptobrevin


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.1   0.0   1.4e-19   1.9e-15       4      83 ..      53     132 ..      50     135 .] 0.94

  Alignments for each domain:
  == domain 1    score: 56.1 bits;  conditional E-value: 1.4e-19
  PF00957.16   4 klskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklkrkmwwknmklliililvvlililii 83 
                 ++ ++ ++++++++imk+Ni++vl+rge l+++ + +++Lq+++++Fk  a+k+     w++    +++++v+++++l+ 
  MMETSP1325-20131115|7823_1  53 NTGRLSEDLNDIHNIMKKNINEVLKRGEGLESMAEVSKKLQSESSNFKWGAKKVSLMAQWQQHAPFVAVGGVLFLVLLLK 132
                 6678899*******************************************************************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       577  (0.042203); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 703.28
//
Query:       MMETSP1325-20131115|7826_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 613.47
//
Query:       MMETSP1325-20131115|7828_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0094   15.6   3.0      0.011   15.3   2.1    1.0  1  PF01456.12 Mucin-like glycoprotein


Domain annotation for each model (and alignments):
>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   2.1   8.3e-07     0.011      79     138 ..      12      67 ..       3      70 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 8.3e-07
  PF01456.12  79 tttttttttateaPsdavttaeaPtttttrapsrlrevdGslsssaWvcaPLllavsala 138
                 ++ t  ++++te P   +++  aP tt+      +  +  ++ ++a vca Lll+ sa+a
  MMETSP1325-20131115|7828_1  12 AAETRSAAASTELPRVGIASKLAPPTTEPA----VYPIARAPNTPALVCAMLLLVCSAIA 67 
                 45566677889*************999887....899999******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 321.02
//
Query:       MMETSP1325-20131115|7833_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.9   0.1      0.042   13.7   0.0    1.7  2  PF05103.8 DivIVA protein


Domain annotation for each model (and alignments):
>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0     3e-06     0.042      16      39 ..      31      54 ..      27      70 .. 0.74
   2 ?   -2.8   0.0      0.41   5.6e+03      40      40 ..     113     113 ..      96     138 .. 0.52

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 3e-06
   PF05103.8 16 rGYdeeeVdeFLdqvikdyeallk 39
                 GY+ ++Vd++L+++++d  a+ +
  MMETSP1325-20131115|7833_1 31 DGYNLDQVDSYLENIARDRGAIEE 54
                5****************9776543 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.41
   PF05103.8  40 e 40 
                 e
  MMETSP1325-20131115|7833_1 113 E 113
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 899.86
//
Query:       MMETSP1325-20131115|7831_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1093.34
//
Query:       MMETSP1325-20131115|7832_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-19   68.3   0.1      6e-19   67.7   0.1    1.1  1  PF00787.19 PX domain


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7   0.1   4.4e-23     6e-19       3     104 ..      50     146 ..      46     152 .. 0.88

  Alignments for each domain:
  == domain 1    score: 67.7 bits;  conditional E-value: 4.4e-23
                 EEEEEEEEEEEE.CETSSEEEEEEEECS-SCEEEEEEEHHHHHHHHHHHHHHTTTSTSTS--TTSSSHHCGTTSHHHHHHHHHHHHHHHHHHHHSCHHHHSH CS
  PF00787.19   3 laqvsvleretkgskkhsyylievelktgakewtvkRrYsdFeeLhskLlrkfprlklPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrkse 104
                 +++vsv  +++  +k+ +++ +++e + g+ +w v+RrYs F  Lh++L+ +     lP lP+k+l+g+   +d++f+e+rr++Le yLq+ll++p +r+s+
  MMETSP1325-20131115|7832_1  50 ISKVSVKSSHK-SEKRFAVFEVNIEASAGSLRWPVHRRYSSFATLHQNLRAEGY-QNLPVLPDKRLVGN---FDPAFLEQRRAQLETYLQELLHMPRVRSSS 146
                 45666666664.59999999999999999********************98877.99**********98...*************************99954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 891.98
//
Query:       MMETSP1325-20131115|7834_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-12   45.0   0.0    9.3e-12   44.6   0.0    1.1  1  PF13088.1  BNR repeat-like domain
    2.9e-06   26.1   4.8       0.17   11.6   0.1    4.3  4  PF02012.15 BNR/Asp-box repeat
  ------ inclusion threshold ------
      0.032   14.2   0.1        2.2    8.3   0.0    2.2  2  PF14119.1  Domain of unknown function (DUF4288)


Domain annotation for each model (and alignments):
>> PF13088.1  BNR repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   2.1e-15   9.3e-12     136     268 ..      21     159 ..       5     165 .. 0.79

  Alignments for each domain:
  == domain 1    score: 44.6 bits;  conditional E-value: 2.1e-15
                 EEEEES------B-----S...BSEECEEEEE.EE---EEEEEEEE....EEEEEEES-------E.E-EEEEE----.......---..SEEEEE-...----.....S--B--EESTT-GGG------SB---...EEEEE---- CS
   PF13088.1 136 llelsddggktWrkgrpve...slrgeiqpsilvlpdgrllallRsrgadrilrseSsdgGetwsk.veptdlpnpnsgidavtlkdg..rlllvyN...kesa.....RapLslavseddgksWkeiltLedgpngeysYPsliqa 268
                 +  +sdd+g tW+  +      ++ +e+q + l  ++ ++++++R   +dr++ s+S+d Get+    e+ dl     g  +   +d   + l++++   +  +     R+++++  s+d+g+sW+    + +g    ++Y+++  +
  MMETSP1325-20131115|7834_1  21 HTIVSDDKGETWSILNHEFgegHYVNELQAAQL--ANSTVVINARE-FNDRRVLSYSNDEGETFYRvSEAADLHETYQGCEGSMITDAegAKLYYSGvqgR--TpariyRENMTIFESADAGESWQLAQSVTEGA---SGYSAMQLM 159
                 7889********988876697766677777777..999********.*****************6646777888887776665555544166655556541..156789**************************...*****9766 PP

>> PF02012.15  BNR/Asp-box repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.1   3.8e-05      0.17       2      11 ..      24      33 ..      23      34 .. 0.91
   2 !    6.2   0.0    0.0024        11       2      11 ..      73      82 ..      72      83 .. 0.88
   3 ?   -2.0   0.1       1.2   5.7e+03       1       9 [.     111     119 ..     111     119 .. 0.82
   4 !    7.8   0.0   0.00073       3.3       1      11 [.     131     141 ..     131     142 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 3.8e-05
                EEST-----E CS
  PF02012.15  2 yStDgGkTWs 11
                +S+D G+TWs
  MMETSP1325-20131115|7834_1 24 VSDDKGETWS 33
                8********8 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0024
                EEST-----E CS
  PF02012.15  2 yStDgGkTWs 11
                yS D G+T+ 
  MMETSP1325-20131115|7834_1 73 YSNDEGETFY 82
                9*******95 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 1.2
                 EEEST---- CS
  PF02012.15   1 yyStDgGkT 9  
                 yyS  +G T
  MMETSP1325-20131115|7834_1 111 YYSGVQGRT 119
                 899888987 PP

  == domain 4    score: 7.8 bits;  conditional E-value: 0.00073
                 EEEST-----E CS
  PF02012.15   1 yyStDgGkTWs 11 
                 + S D G++W+
  MMETSP1325-20131115|7834_1 131 FESADAGESWQ 141
                 5799******8 PP

>> PF14119.1  Domain of unknown function (DUF4288)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00048       2.2      18      63 ..      59     103 ..      43     104 .. 0.86
   2 ?    3.6   0.0     0.014        66      21      48 ..     121     148 ..     113     155 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00048
   PF14119.1  18 eddaklfeErlvLvkAkseeeAyekaeklakeeeekykNedgeqvr 63 
                   +a  f +r vL + ++e e + ++ + a   +e+y++++g++++
  MMETSP1325-20131115|7834_1  59 VINAREFNDRRVLSYSNDEGETFYRVSE-AADLHETYQGCEGSMIT 103
                 5567789999******************.99***********9986 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.014
   PF14119.1  21 aklfeErlvLvkAkseeeAyekaeklak 48 
                 a +++E++ +++  +  e ++ a+ +++
  MMETSP1325-20131115|7834_1 121 ARIYRENMTIFESADAGESWQLAQSVTE 148
                 679****************999998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 1002.56
//
Query:       MMETSP1325-20131115|7836_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 632.64
//
Query:       MMETSP1325-20131115|7837_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   12.9   0.9      0.031   12.7   0.6    1.0  1  PF06873.6 Cell surface immobilisation antigen SerH


Domain annotation for each model (and alignments):
>> PF06873.6  Cell surface immobilisation antigen SerH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.6   2.3e-06     0.031     152     192 ..       9      52 ..       4      76 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.3e-06
   PF06873.6 152 CaaCattstaknknvfAnsagsaCVassascgsasratt....aW 192
                 C++ attst++ ++ fAn+a sa Vass  +++++++++    aW
  MMETSP1325-20131115|7837_1   9 CTL-ATTSTPVPSASFANAAFSAGVASSSRIDAGGNGARararAW 52 
                 444.45699999999999999999999988887766655333444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 501.06
//
Query:       MMETSP1325-20131115|7829_1  [L=1470]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-51  173.8  26.7    1.9e-27   95.4   5.6    2.4  2  PF01699.19 Sodium/calcium exchanger protein
    4.2e-15   55.5   0.4    4.9e-09   36.0   0.0    2.6  2  PF13499.1  EF-hand domain pair
    3.4e-10   38.8   0.4     0.0035   17.0   0.0    4.7  5  PF13405.1  EF-hand domain
    9.8e-10   36.9   4.9     0.0029   16.6   0.0    4.7  5  PF00036.27 EF hand
    7.4e-07   28.1   0.1       0.11   11.8   0.0    3.8  3  PF13202.1  EF hand
    4.4e-06   26.1   0.0    0.00021   20.7   0.0    2.6  2  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.068   12.1   8.9       0.51    9.2   5.9    2.5  2  PF01545.16 Cation efflux family
      0.088   12.3   0.0       0.18   11.3   0.0    1.5  1  PF03672.8  Uncharacterised protein family (UPF0154)


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.4   5.6   1.1e-30   1.9e-27       3     138 ..       4     135 ..       2     136 .. 0.95
   2 !   84.1   7.3   3.5e-27   6.1e-24       2     138 ..     496     639 ..     495     640 .. 0.93

  Alignments for each domain:
  == domain 1    score: 95.4 bits;  conditional E-value: 1.1e-30
  PF01699.19   3 islladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkgagdlalgsivGSalfnlllviglcvlisplgekriqkvlvfkvtldfsflllvllllllivllsdgrltvweglvllllyilylvl 138
                  +++ +++v+++e+ia+ ++ls  v+g+tl+A+g+sapEl++s++ ++  +gdl++++ivGSa+fn+l+vig+c++++p +  +   ++++++ +d++ ++++l++l+++++  dg++ + e+++ +lly+ y+vl
  MMETSP1325-20131115|7829_1   4 AIVCDELFVPALEVIADKWELSNDVAGATLMAAGGSAPELFTSLMGVFM-RGDLGFSTIVGSAVFNVLFVIGMCAMFTPEK-FSPLALTWWPLARDCTYYIITLFALVIFMA--DGEVYMHEAIIQFLLYVGYVVL 135
                 68999*******************************************9.9****************************96.458899***************888888888..********************97 PP

  == domain 2    score: 84.1 bits;  conditional E-value: 3.5e-27
  PF01699.19   2 lislladilvesieqiak..vlglsetvlgltllAlgtsapElissiiaalkgagdlalgsivGSalfnlllviglcvlisplgekr...iqkvlvfkvtldfsflllvllllllivll..sdgrltvweglvllllyilylvl 138
                 +i l+++++ve++ ++++   l+++++++g+t++A+gts+p+liss+i+a++g+gd+a++s vGS++f+++++i++++++  l+  +   +  v+ +k +l+++++ll+++++++i+++  s +++t   g +++++y+lyl +
  MMETSP1325-20131115|7829_1 496 MIGLSSYFMVEAVVEVTNqhNLNIPTAISGMTIIAAGTSVPDLISSVIVARNGHGDMAVSSSVGSNIFDVTVGIPIPWIFFILFCDShacEYYVRLDKSDLVLPTILLLIMVAVIIFAIavSNWKMTHGLGYMMFAFYFLYLGF 639
                 79999************844666************************************************************97779999999999999999999999999999999899********************976 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   2.9e-12   4.9e-09       4      66 .]     213     274 ..     206     274 .. 0.91
   2 !   16.9   0.1   2.6e-06    0.0045      11      66 .]     329     379 ..     329     379 .. 0.86

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 2.9e-12
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                 e+F++lD +++g+++++eL++ll  lg+    e +++ l +  + +D+ g+G +s +Ef+ ++
  MMETSP1325-20131115|7829_1 213 EVFDSLDENKNGSIEPAELKKLLVTLGTAE-AELTDDALKKHAEAIDTAGNGHISKNEFVIWY 274
                 68*************************987.78888888888*****************9765 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 2.6e-06
   PF13499.1  11 kdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                 ++++g++dk+e+++ll ++g++ s  +++e      ke++    G l+fe+f +++
  MMETSP1325-20131115|7829_1 329 QNNSGTIDKDEIKKLLEGMGHKPSSADIEEA----EKEINQT-EGELNFEDFSAWY 379
                 599*****************66666666665....9999998.9********9886 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0     2e-06    0.0035       2      27 ..     211     236 ..     210     241 .. 0.90
   2 !    6.1   0.0    0.0061        10       8      26 ..     256     274 ..     255     278 .. 0.87
   3 ?   -0.6   0.0      0.89   1.5e+03       1      10 [.     284     293 ..     284     296 .. 0.90
   4 !    9.1   0.0   0.00068       1.2      11      27 ..     329     345 ..     325     349 .. 0.87
   5 ?   -2.6   0.0       3.9   6.7e+03      15      28 ..     368     381 ..     368     384 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 2e-06
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 ++e+F+ +D +++G i+ +EL+++L 
  MMETSP1325-20131115|7829_1 211 VYEVFDSLDENKNGSIEPAELKKLLV 236
                 579********************997 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0061
                 CC-------B---HHHHHH CS
   PF13405.1   8 lfDkdgdGkidaeELrdaL 26 
                 ++D+ g+G i+++E++ ++
  MMETSP1325-20131115|7829_1 256 AIDTAGNGHISKNEFVIWY 274
                 68*************9776 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.89
                 HHH---GCC- CS
   PF13405.1   1 elreaFklfD 10 
                 e++e+F+ fD
  MMETSP1325-20131115|7829_1 284 EMKECFDRFD 293
                 799******9 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.00068
                 ------B---HHHHHHH CS
   PF13405.1  11 kdgdGkidaeELrdaLr 27 
                 ++++G+id++E++++L 
  MMETSP1325-20131115|7829_1 329 QNNSGTIDKDEIKKLLE 345
                 69************998 PP

  == domain 5    score: -2.6 bits;  conditional E-value: 3.9
                 --B---HHHHHHH. CS
   PF13405.1  15 GkidaeELrdaLrk 28 
                 G++++e++ ++++k
  MMETSP1325-20131115|7829_1 368 GELNFEDFSAWYKK 381
                 899*****999986 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.7e-06    0.0029       2      28 ..     211     237 ..     210     238 .. 0.91
   2 !    9.1   0.0   0.00043      0.73       8      26 ..     256     274 ..     250     277 .. 0.85
   3 ?   -1.6   0.3       1.1   1.9e+03       1      11 [.     284     294 ..     284     294 .. 0.89
   4 !    9.1   0.1   0.00043      0.74      12      27 ..     330     345 ..     329     347 .. 0.89
   5 ?   -0.4   0.0      0.49   8.3e+02      15      28 ..     368     381 ..     367     382 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.7e-06
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 + e+F+ +D +++G I+  E+k++l +
  MMETSP1325-20131115|7829_1 211 VYEVFDSLDENKNGSIEPAELKKLLVT 237
                 679********************9976 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00043
                 HHCTTTSSEBEHHHHHHHH CS
  PF00036.27   8 efDkDgdGkIsfeEfkeal 26 
                  +D+ g+G+Is++Ef+ ++
  MMETSP1325-20131115|7829_1 256 AIDTAGNGHISKNEFVIWY 274
                 68999**********9776 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 1.1
                 HHHHHHHHHCT CS
  PF00036.27   1 elkeaFkefDk 11 
                 e+ke F+ fD+
  MMETSP1325-20131115|7829_1 284 EMKECFDRFDV 294
                 789*******6 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.00043
                 TTSSEBEHHHHHHHHH CS
  PF00036.27  12 DgdGkIsfeEfkealk 27 
                 +++G+I+++E k++l+
  MMETSP1325-20131115|7829_1 330 NNSGTIDKDEIKKLLE 345
                 9************997 PP

  == domain 5    score: -0.4 bits;  conditional E-value: 0.49
                 SEBEHHHHHHHHHH CS
  PF00036.27  15 GkIsfeEfkealkk 28 
                 G ++fe+f +++kk
  MMETSP1325-20131115|7829_1 368 GELNFEDFSAWYKK 381
                 899*****999886 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   6.2e-05      0.11       4      25 .]     214     235 ..     211     236 .. 0.90
   2 ?    3.1   0.0     0.035        60       7      21 ..     256     270 ..     255     275 .. 0.90
   3 !    8.6   0.1   0.00064       1.1      11      25 .]     330     344 ..     329     344 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.2e-05
                 HHHHH--S----B-HHHHHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELkrlv 25 
                 +F+ +D N+ G I + ELk+l+
  MMETSP1325-20131115|7829_1 214 VFDSLDENKNGSIEPAELKKLL 235
                 7******************964 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.035
                 HH--S----B-HHHH CS
   PF13202.1   7 afDlNgDGkIsreEL 21 
                 a+D+ g G Is+ E+
  MMETSP1325-20131115|7829_1 256 AIDTAGNGHISKNEF 270
                 78999*********9 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.00064
                 S----B-HHHHHHHH CS
   PF13202.1  11 NgDGkIsreELkrlv 25 
                 N++G+I+++E k+l+
  MMETSP1325-20131115|7829_1 330 NNSGTIDKDEIKKLL 344
                 9**********9975 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.2e-07   0.00021       1      48 [.     222     271 ..     222     272 .. 0.96
   2 ?    2.3   0.0     0.066   1.1e+02      37      52 ..     330     345 ..     329     352 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.2e-07
   PF13833.1   1 ekGlItreeLkralallglkg..lseeevdilfrefDtdgdGkisfeEFc 48 
                 ++G+I ++eLk+ l +lg+ +  l+++ +     ++Dt g+G is++EF+
  MMETSP1325-20131115|7829_1 222 KNGSIEPAELKKLLVTLGTAEaeLTDDALKKHAEAIDTAGNGHISKNEFV 271
                 58**********999999999****************************7 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.066
   PF13833.1  37 dgdGkisfeEFcvlle 52 
                 +++G i+++E ++lle
  MMETSP1325-20131115|7829_1 330 NNSGTIDKDEIKKLLE 345
                 8999999999999886 PP

>> PF01545.16  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.27   4.6e+02     198     230 ..     347     379 ..     337     388 .. 0.86
   2 ?    9.2   5.9    0.0003      0.51      70     188 ..     488     640 ..     482     710 .. 0.66

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.27
  PF01545.16 198 lgavpdpedldelesalreldgvlsvhdlhvwk 230
                 +g  p++ d++e e+++++++g l+ +d ++w+
  MMETSP1325-20131115|7829_1 347 MGHKPSSADIEEAEKEINQTEGELNFEDFSAWY 379
                 56669999*********99*************7 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0003
  PF01545.16  70 galvnsvlllflavfillesierliepheidapeialgvalis...llvnlllalllrragrk.............................sskrssalravalhvlgdalgs.....lgvlvaallilftglnlylDpilsllialiilytglp 188
                 ++++ s+++++l  + ++e++  ++++h+ + p ++ g+++i+    +  l++  +  r+g++                             +   s a +   +   +d+++      ++v v +++i + +++ +   ++ + +a++ ly g+ 
  MMETSP1325-20131115|7829_1 488 FTFFMSIVMIGLSSYFMVEAVVEVTNQHNLNIPTAISGMTIIAagtSVPDLISSVIVARNGHGdmavsssvgsnifdvtvgipipwiffilfC--DSHACEYYVRLDKSDLVLPtilllIMVAVIIFAIAVSNWK-MTHGLGYMMFAFYFLYLGFX 640
                 799********************************9996666623366667777777777776777888888888888888888888888643..4777777777777777776555333333333333333444.59999999999999999886 PP

>> PF03672.8  Uncharacterised protein family (UPF0154)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0    0.0001      0.18      32      62 ..     335     365 ..     329     367 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.0001
   PF03672.8  32 inedairlmlaqmGrkpSekqinqilkaikk 62 
                 i +d i+ +l  mG+kpS   i++  k+i++
  MMETSP1325-20131115|7829_1 335 IDKDEIKKLLEGMGHKPSSADIEEAEKEINQ 365
                 899*********************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1470 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       533  (0.0389848); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.96u 0.33s 00:00:02.29 Elapsed: 00:00:00.83
# Mc/sec: 4244.15
//
Query:       MMETSP1325-20131115|7840_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-09   36.0   0.2    4.8e-09   35.8   0.1    1.1  1  PF00156.22 Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> PF00156.22  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.1   3.5e-13   4.8e-09      35     104 ..       2      65 ..       1      66 [] 0.84

  Alignments for each domain:
  == domain 1    score: 35.8 bits;  conditional E-value: 3.5e-13
                 E------HHHHHHHHHHHHHH-----SS-SEE---------EEEEES-GGGGTTSEEEEEEEEE----HH CS
  PF00156.22  35 argGvplatelaraLglpldlvrvrkssapassetsrkreaailesrpeedlkgkrvliVDDvlatGgTl 104
                 a++G+plat++  aL  ++ l + ++      + +++ + +  +     ++l+gkrvl+VDDv++ G+++
  MMETSP1325-20131115|7840_1   2 AYKGIPLATAVGIALSTEYGLDYGVT------YNRKEAKDHGEGGLLVGASLDGKRVLLVDDVITAGTAI 65 
                 79******************999874......4555555555666678899****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 304.15
//
Query:       MMETSP1325-20131115|7838_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 911.56
//
Query:       MMETSP1325-20131115|7839_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.8e-59  199.3   9.5    9.9e-59  199.1   6.6    1.0  1  PF03030.11 Inorganic H+ pyrophosphatase


Domain annotation for each model (and alignments):
>> PF03030.11  Inorganic H+ pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.1   6.6   7.2e-63   9.9e-59     323     482 ..       8     165 ..       2     166 .] 0.95

  Alignments for each domain:
  == domain 1    score: 199.1 bits;  conditional E-value: 7.2e-63
  PF03030.11 323 ekaalklflavliGlvagllivllteyyTsteykpvkeiaea.setGaatniiaGlavglestvlpvlviavailvsyalalkskvglygiaiaavgmLstagiilavdayGPiaDnAgGiaems..eleeevreitdkLDavGnttkAitkGfaigsAaLaa 482
                 + + +k+++++  G+v gl+i+l+teyyTs +y+pvke+a + ++ Gaatnii+Gla+g++s+++p+lv+av i++s++l+       yg+a+aa+gmLst++++l++d yGP+ DnAgGiaem+  el+++vr+ td+LDa+Gntt+Ai+kGfaigsAaL++
  MMETSP1325-20131115|7839_1   8 TATPMKVVVCISSGVVGGLIIGLITEYYTSFSYDPVKEVAVScKKGGAATNIIYGLALGYKSAIIPILVLAVIIFLSFSLC-----DTYGVALAALGMLSTLATCLSIDIYGPVCDNAGGIAEMTlpELPDNVRDCTDALDAAGNTTAAIGKGFAIGSAALVS 165
                 567799**********************************99456789*********************************.....9*************************************9999*********************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       719  (0.0525892); expected 273.4 (0.02)
Passed bias filter:                      462  (0.0337917); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.41s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|7841_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-15   55.7   0.0    3.8e-15   55.7   0.0    1.0  1  PF00784.12 MyTH4 domain


Domain annotation for each model (and alignments):
>> PF00784.12  MyTH4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.0   2.8e-19   3.8e-15      17      71 ..       3      57 ..       1      64 [. 0.94

  Alignments for each domain:
  == domain 1    score: 55.7 bits;  conditional E-value: 2.8e-19
  PF00784.12 17 reeLRDEiycQiikQltknpskesaekgWeLltlltstfpPSeellkylseflkk 71
                +++LRDE+y+Q++kQlt+np + +   gW L+tl +  f+PS el  +++  lk+
  MMETSP1325-20131115|7841_1  3 KPALRDELYVQVLKQLTENPYPAARVAGWLLMTLYLHSFSPSVELYVHIQSHLKS 57
                689********************************************99988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 304.15
//
Query:       MMETSP1325-20131115|7847_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|7844_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 846.06
//
Query:       MMETSP1325-20131115|7849_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|7852_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|7853_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-10   38.2   0.4    8.6e-10   37.7   0.2    1.3  2  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.14   1.9e+03     177     206 ..       5      33 ..       2      34 .. 0.54
   2 !   37.7   0.2   6.3e-14   8.6e-10       1      37 [.      39      75 ..      39      76 .] 0.96

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 0.14
  PF00118.19 177 lieGvvldkgylspdmpkrlenpkillldc 206
                 l++ ++  ++y++pd+ + +++++ ll++c
  MMETSP1325-20131115|7853_1   5 LHRAMAAATKYANPDA-EVVSKAQALLVNC 33 
                 5555666666666644.3346666666555 PP

  == domain 2    score: 37.7 bits;  conditional E-value: 6.3e-14
  PF00118.19  1 ladivkttLGPkGrnkmlvnkggkivitndgatilke 37
                l++i+kt+LGP+G++kmlv  +g+i+it+dg+++l+e
  MMETSP1325-20131115|7853_1 39 LQNILKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHE 75
                689*****************999************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 387.50
//
Query:       MMETSP1325-20131115|7851_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.04   13.7   0.0      0.043   13.5   0.0    1.1  1  PF11113.3 Head assembly gene product


Domain annotation for each model (and alignments):
>> PF11113.3  Head assembly gene product
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.2e-06     0.043      21      53 ..       3      35 ..       1      37 [. 0.80

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.2e-06
   PF11113.3 21 eleyddgklkvdfstpsedekdeLa..phVekavt 53
                ++eyd g  ++ +++p e  kdeLa  ++V + + 
  MMETSP1325-20131115|7851_1  3 NAEYDLGSHVLRWKAPAE--KDELAayQLVGEVMA 35
                8999*9*9**********..9*9962267777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        98  (0.00716793); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 191.71
//
Query:       MMETSP1325-20131115|7854_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       531  (0.0388385); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|7843_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-20   71.1   0.1    8.1e-20   70.8   0.0    1.1  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.0   5.9e-24   8.1e-20       3     102 ..      27     117 ..      25     119 .. 0.94

  Alignments for each domain:
  == domain 1    score: 70.8 bits;  conditional E-value: 5.9e-24
                 BEEEEEEEETSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24   3 keGyllkksellktwkkryfvLtsnyLlyfksskkksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                  +G+l+k+s++lk+w++ryf+L++++L+++k ++     ap g+i+l  c tvk a+ +      +++n +e++++d+ ++l++a+se+e+ +W+ a+ ++
  MMETSP1325-20131115|7843_1  27 FQGWLTKQSSWLKEWRRRYFILKGSKLFFCKTES----GAPHGMIDLAHCmTVKSAELK-----AQKRNALEVSTPDT-TFLMYADSEKEKDDWIGAIGRA 117
                 69*******************************8....8***********888888887.....7*************.******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 870.98
//
Query:       MMETSP1325-20131115|7859_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.039   13.5   0.0      0.067   12.8   0.0    1.4  1  PF13245.1  Part of AAA domain
      0.052   12.8   0.0       0.11   11.8   0.0    1.5  2  PF02283.11 Cobinamide kinase / cobinamide phosphate guanyltransferase
      0.064   13.2   0.0       0.19   11.7   0.0    1.6  2  PF13401.1  AAA domain
       0.13   11.2   0.0       0.16   10.9   0.0    1.2  1  PF06414.7  Zeta toxin


Domain annotation for each model (and alignments):
>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     2e-05     0.067       8      33 ..      48      75 ..      41      80 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2e-05
   PF13245.1  8 a...gnpllvvtGgPGtGKTttlaaiiaa 33
                +   +++l+vv GgP +GK  +l+ ++a+
  MMETSP1325-20131115|7859_1 48 SeglQQSLVVVVGGPRSGKG-ALCERVAR 75
                3345599************9.99988886 PP

>> PF02283.11  Cobinamide kinase / cobinamide phosphate guanyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       0.6     2e+03     137     151 ..      22      36 ..       9      50 .. 0.58
   2 ?   11.8   0.0   3.1e-05      0.11       1      24 [.      56      79 ..      56      84 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.6
  PF02283.11 137 lfrdllGrlnqklaa 151
                  f d++ ++n +la+
  MMETSP1325-20131115|7859_1  22 FFPDIVREMNGSLAN 36 
                 555555555555543 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 3.1e-05
  PF02283.11  1 ilvtGgarSGKSefAeklaaesgk 24
                ++v+Gg rSGK ++ e++a+++++
  MMETSP1325-20131115|7859_1 56 VVVVGGPRSGKGALCERVARDRTN 79
                689***************987654 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.38   1.3e+03      55      81 ..      23      45 ..       7      51 .. 0.53
   2 ?   11.7   0.0   5.5e-05      0.19       3      31 ..      52      80 ..      47      87 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.38
   PF13401.1 55 lqkllsalglpakgrltteellealqe 81
                + ++++++  ++     +eel + +q+
  MMETSP1325-20131115|7859_1 23 FPDIVREMNGSLA----NEELCQEIQR 45
                4444444443333....3555555544 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 5.5e-05
   PF13401.1  3 sagilvvtGesGvGKTtllrrlarqldee 31
                +++++vv+G + +GK  l++r+ar++ +e
  MMETSP1325-20131115|7859_1 52 QQSLVVVVGGPRSGKGALCERVARDRTNE 80
                68899*******************98764 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.7e-05      0.16      11      40 ..      48      77 ..      36      86 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4.7e-05
   PF06414.7 11 peqekpkavllgGqpGAGKtslaellleel 40
                 e  ++ +v+++G p +GK++l e++ ++ 
  MMETSP1325-20131115|7859_1 48 SEGLQQSLVVVVGGPRSGKGALCERVARDR 77
                3448999*****************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|7855_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-35  119.0   0.0    1.1e-34  118.7   0.0    1.1  1  PF07977.8  FabA-like domain
  ------ inclusion threshold ------
      0.018   15.0   0.0      0.029   14.3   0.0    1.3  1  PF03061.17 Thioesterase superfamily
       0.14   11.4   0.0       0.16   11.3   0.0    1.2  1  PF03749.8  Sugar fermentation stimulation protein


Domain annotation for each model (and alignments):
>> PF07977.8  FabA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.0   2.5e-38   1.1e-34       1     136 [.      41     165 ..      41     167 .. 0.95

  Alignments for each domain:
  == domain 1    score: 118.7 bits;  conditional E-value: 2.5e-38
   PF07977.8   1 lphryplllldrvleieeeggkagGlivaeknvtpnewfFqgHFpgdpvmPGvLivealaQlvgfyllksgleegkgrarklvlfagidevkfrgqvtPgdkqlrleveikkvserrlvigiadaralvdgklvye 136
                 lphryp+ l+d+v+e+e  g++    +v+ k++t+ne+ F gHFp++p+mPGv+ +ealaQl+g+++l+ ++ ++ g   ++++fa++d vk++++v+Pgd +l++evei++  +++  i++a+++ +vdg+l+++
  MMETSP1325-20131115|7855_1  41 LPHRYPFALIDKVIEYE-AGKR----AVGVKTITFNEPQFGGHFPDRPIMPGVMQIEALAQLAGIVCLQMEG-AEPG---AVFFFAAVDGVKWKRPVVPGD-VLVMEVEINS-WKSKFGIAKASGKGYVDGQLAVD 165
                 8****************.9999....*******************************************966.6666...7899*****************.**********.9999***************9986 PP

>> PF03061.17  Thioesterase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   6.4e-06     0.029      12      64 ..      94     148 ..      90     155 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 6.4e-06
                 HHHHHHHHHHHHTSTC..TEEEEEEEEEEEESS---TTSEEEEEEEEEEE-SSEE CS
  PF03061.17  12 lldeaaglalrslggs..gqgvvvvelnidFlrpvrlgdvltvearvlrlgrtsa 64 
                 l+  a+ ++l   g +   + + ++ + ++ +rpv +gdvl++e++++ + +++ 
  MMETSP1325-20131115|7855_1  94 LAQLAGIVCLQMEGAEpgAVFFFAAVDGVKWKRPVVPGDVLVMEVEINSWKSKFG 148
                 55666666666666668889999*************************9998875 PP

>> PF03749.8  Sugar fermentation stimulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.5e-05      0.16     105     153 ..      49      98 ..      13     132 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 3.5e-05
   PF03749.8 105 riDfllkedeeklyvEvKsvtLskegva.lFPDaptaRgqkHlreLaala 153
                  iD  ++ + +k +v vK +t+ + + +  FPD p   g   ++ La+la
  MMETSP1325-20131115|7855_1  49 LIDKVIEYEAGKRAVGVKTITFNEPQFGgHFPDRPIMPGVMQIEALAQLA 98 
                 4899999*999*************99988***********9999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 873.67
//
Query:       MMETSP1325-20131115|7856_1  [L=421]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-08   31.3   0.1    1.1e-07   30.9   0.1    1.2  1  PF08449.6  UAA transporter family
    2.6e-07   29.9   0.0      5e-07   29.0   0.0    1.4  1  PF04142.10 Nucleotide-sugar transporter
  ------ inclusion threshold ------
      0.016   15.1   6.5      0.016   15.1   4.5    4.0  4  PF00892.15 EamA-like transporter family
       0.13   11.6   1.7       0.35   10.2   0.0    2.1  2  PF01350.12 Flavivirus non-structural protein NS4A


Domain annotation for each model (and alignments):
>> PF08449.6  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.1   3.2e-11   1.1e-07      59     233 ..     106     310 ..      62     366 .. 0.82

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 3.2e-11
   PF08449.6  59 krkiplktYvlivalfflssvlnneaLkyisyPtqvifkSgklipvmilgvlilgkrYsllqylsvllitlGviiftlasaksskskketteekkv.................Gilllvlallldallgavqeklykkygksskemlfyshllslpfflllllsik.tgelasavsfll............khpsvlfylllnsl 233
                 +    l++ +l ++l +l +vl n  L ++s  ++ + + + +i   il+v  lgk  +++ y s+ ++++ v++   a +++++  ++ ++   +                 G+l ++ a+l++a+  ++ ekl+ + g+ ++ ++ +  l+++++f+ l + +  t    s++s +             + p++++ ++ + +
  MMETSP1325-20131115|7856_1 106 PTPEALRQVWLPALLDLLNTVLGNIGLVWVSSSIYQMTRGSVVIFSAILSVQWLGKTLRSFHYWSIAFVVIAVVLVGTAGTQQDSDTDDGGDDGGDdkgddgdsesstseiiiGLLFILAAQLVTAIQIITEEKLMTRVGMAPVCLVGMEGLWGMLYFIPLSIILTlTPASDSSISTVWhedfidsfvqlgNSPQLAGIAFGYFI 310
                 4556788999999999**********************************************************99988888888888887777668999**********************************************************99999988777777777766666666666666644444444444444 PP

>> PF04142.10  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   1.5e-10     5e-07      19     131 ..     113     241 ..     104     251 .. 0.91

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 1.5e-10
  PF04142.10  19 KlavPaliYtlqNnllyvalsnldaatyqvtyqlkilttAlfsvllLkrkLstlqWasllllvlgvvlvqlkqkeseaekkrea................eenivlGlvavlvacllsgfAgvYfEKiL 131
                 ++ +Pal+  l+  l  ++l  + +++yq+t    ++  A++sv  L+++L   +++s+  +v++vvlv ++ ++++++++ +                 +++i++Gl  +l+a l++++  +  EK++
  MMETSP1325-20131115|7856_1 113 QVWLPALLDLLNTVLGNIGLVWVSSSIYQMTRGSVVIFSAILSVQWLGKTLRSFHYWSIAFVVIAVVLVGTAGTQQDSDTDDGGddggddkgddgdsessTSEIIIGLLFILAAQLVTAIQIITEEKLM 241
                 6789*****************************************************************998888855555555789***********999999***************9999999986 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.82   2.8e+03      18      66 ..      21      38 ..      15      46 .. 0.52
   2 ?   15.1   4.5   4.7e-06     0.016      65     125 ..     122     182 ..      68     183 .. 0.80
   3 ?   -0.8   3.8      0.37   1.3e+03      11      89 ..     239     337 ..     228     356 .. 0.66
   4 ?   -0.2   0.2      0.26   8.7e+02      30      62 ..     345     376 ..     336     388 .. 0.56

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.82
  PF00892.15 18 spltitayrlliagillilllfllrepialislkdilallllgllgtvl 66
                sp++                               ++a++ll+  +t+l
  MMETSP1325-20131115|7856_1 21 SPVF-------------------------------WAAIMLLSGTCTTL 38
                3444...............................44444444444443 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 4.7e-06
  PF00892.15  65 vlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvllll 125
                 +l  +l +++l  +s+s+  +    +++f+++lsv +lg++l+ +++ +i++++++v+l+ 
  MMETSP1325-20131115|7856_1 122 LLNTVLGNIGLVWVSSSIYQMTRGSVVIFSAILSVQWLGKTLRSFHYWSIAFVVIAVVLVG 182
                 5666777899************************************************986 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.37
  PF00892.15  11 kklles.vspltitayrlliagi.llilllfllrep.................ialislkdilallllgllgtvlgyllf.fyalkktsasnaslitsl 89 
                 k++++  + p+ ++++  l +++ +++l ++l+  p                 + ++ ++  la +++g + t+l+y    ++  +++sa++ s++ + 
  MMETSP1325-20131115|7856_1 239 KLMTRVgMAPVCLVGMEGLWGMLyFIPLSIILTLTPasdssistvwhedfidsFVQLGNSPQLAGIAFGYFITILAYNISaNFVTQNLSAVVRSILEAC 337
                 444444788888888888888888888888888777777888888888887775566666666666666666666665541455888888888888764 PP

  == domain 4    score: -0.2 bits;  conditional E-value: 0.26
  PF00892.15  30 agillilllfllrep.ialislkdilallllgll 62 
                 a+  l+l+ ++ +++  + ++ +++l l  +++l
  MMETSP1325-20131115|7856_1 345 AS--LALYYIFNSKSvGEAWTAWSWLELGGFAVL 376
                 33..444444444444556666666666555554 PP

>> PF01350.12  Flavivirus non-structural protein NS4A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0    0.0001      0.35      45     124 ..     107     188 ..      95     194 .. 0.84
   2 ?   -1.2   0.8      0.36   1.2e+03      53      90 ..     219     256 ..     211     263 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0001
  PF01350.12  45 lPealetilllallgll..tlgvlllllarkgigrmslgvvvllvaavllwlggvsagkiAgvllvfflllvvLiPepekQR 124
                  Peal  + l all ll   lg + l+  + +i +m+ g vv++ a + + + g +        + f ++ vvL+  +++Q 
  MMETSP1325-20131115|7856_1 107 TPEALRQVWLPALLDLLntVLGNIGLVWVSSSIYQMTRGSVVIFSAILSVQWLGKTLRSFHYWSIAFVVIAVVLVGTAGTQQ 188
                 7999999999888866521578888999999************99998888888899999****************999986 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.36
  PF01350.12  53 lllallglltlgvlllllarkgigrmslgvvvllvaav 90 
                  ll++l++  ++ + ++ ++k + r++++ v+l+ + +
  MMETSP1325-20131115|7856_1 219 GLLFILAAQLVTAIQIITEEKLMTRVGMAPVCLVGMEG 256
                 35566666667777788889999999999999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       703  (0.051419); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.81u 0.42s 00:00:01.23 Elapsed: 00:00:00.56
# Mc/sec: 1801.55
//
Query:       MMETSP1325-20131115|7862_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   10.1   1.3       0.18   10.1   0.9    1.0  1  PF09786.4 Cytochrome B561, N terminal


Domain annotation for each model (and alignments):
>> PF09786.4  Cytochrome B561, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.9   1.3e-05      0.18     126     190 ..       5      70 ..       1      80 [. 0.83

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 1.3e-05
   PF09786.4 126 svsqakksppavktklpansse.plvqihsvledSksrsksssakfsssstsqqskqltsskklas 190
                 s++ +++ p  +k+++p+++++ p+   +s++++S  +s s sa + ss++++  k++ts + ++s
  MMETSP1325-20131115|7862_1   5 SSASTSRGPGRLKKASPSATNTlPSWTARSPFHQSRPASFSASAWLASSDMPHGAKMITSGSDATS 70 
                 5667777888889999987765489999****************************9998555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 429.35
//
Query:       MMETSP1325-20131115|7850_1  [L=345]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   57.1   4.8    1.4e-15   57.1   3.3    2.2  2  PF03151.11 Triose-phosphate Transporter family
    1.9e-07   30.1  12.1    3.9e-07   29.1   8.4    1.6  1  PF08449.6  UAA transporter family
      1e-05   25.4  23.8    9.5e-05   22.3   4.2    2.4  2  PF00892.15 EamA-like transporter family
     0.0026   16.8  12.4     0.0055   15.8   0.5    2.5  3  PF04142.10 Nucleotide-sugar transporter
  ------ inclusion threshold ------
      0.023   14.5   0.6      0.062   13.1   0.4    1.7  1  PF05488.8  PAAR motif
      0.026   13.9   2.4      0.038   13.3   0.1    2.5  3  PF06196.7  Protein of unknown function (DUF997)
        1.5    8.5   9.5       0.23   11.1   1.3    2.9  2  PF03840.9  Preprotein translocase SecG subunit


Domain annotation for each model (and alignments):
>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   3.5       1.6     3e+03      76     127 ..      99     150 ..      31     172 .. 0.65
   2 !   57.1   3.3   7.4e-19   1.4e-15       1     152 [.     184     329 ..     184     330 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 1.6
  PF03151.11  76 sivryvlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsvi 127
                 + +r+   ++  +v+ f+ n+++ + l ++   +  v+     vl+++l vi
  MMETSP1325-20131115|7850_1  99 ELTRGASSFAPVAVCLFGANLLNSVALVKTGITVTYVIKSGIPVLTVLLCVI 150
                 4556777777778888888888888888888777777777777777776654 PP

  == domain 2    score: 57.1 bits;  conditional E-value: 7.4e-19
  PF03151.11   1 Gfilalaasllfalrlvltqlllrkklkkeskldplelliylspvafivllvvlllvegpklgkesssiksldls.sivryvlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGvvlYs 152
                 G+ +a+a++++  + +v +++  +      ++++ +  +++++++a+ + +++++++  p l+++ ++  +     ++ + +ll+++++ ++++   ++f+  + v +lt+sva i+ r+++i++++++f++ +t+ln++G+++al+Gv+ Y+
  MMETSP1325-20131115|7850_1 184 GVAAAMASAMAQTFLNVTSKKASQT-----TNIQGFPAFFIMCCIASGLATILFYTTPSPPLFTHAMEQLRG--PdHNGYPWLLIIAAAAAYQIEYGLNFVFSSYVDPLTFSVADIARRLAIIIFGAVLFNKDLTMLNMMGIVLALVGVLTYN 329
                 788999999********99999999.....8****************9999999999999977777655552..2246678888888888888888899*****************************************************8 PP

>> PF08449.6  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   8.4     2e-10   3.9e-07      57     300 ..      97     333 ..      51     336 .. 0.79

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 2e-10
   PF08449.6  57 lkkrkiplktYvlivalfflssvlnneaLkyisyPtqvifkSgklipvmilgvlilgkrYsllqylsvllitlGviiftlasaksskskketteekkvGilllvlallldallgavqeklykkygksskemlfyshllslpfflllllsik.tgelasavsfll.....khpsvlfylllnsltqyvgikfvflliaefgaltvtlvttlRKfvslllSvllFgnpltlqqwlGvllVflgillkallkk 300
                 + + +  + +++ +++  f+++ ln  aL    + +  ++kSg ++ +++l+ +i+g r+++  y+s l  ++Gv++++ +    + s++        G++  + + +++ +l+ +  k+ +  + +   + f++ ++++ +  +l+       ++  a++ l       +p++l+ +++ +     g +fvf   + +++lt+++   +R++  +++  +lF++ lt+  ++G++l ++g+l + ll++
  MMETSP1325-20131115|7850_1  97 QHELTRGASSFAPVAVCLFGANLLNSVALVKTGITVTYVIKSGIPVLTVLLC-VIQGARFPMSIYMSLLPTVVGVALASAS----DVSFDGV------GVAAAMASAMAQTFLNVTSKKASQTTNIQGFPAFFIMCCIASGLATILFYTTPsPPLFTHAMEQLRgpdhnGYPWLLIIAAAAAYQIEYGLNFVFS--SYVDPLTFSVADIARRLAIIIFGAVLFNKDLTMLNMMGIVLALVGVLTYNLLNQ 333
                 4555666778888999************************************.99********************998654....4566666......9**********************9999999887777777655444333333232444444444444775555555555555666666679999987..5699******************************************99988765 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   6.8   0.00064       1.3      22     125 ..      75     174 ..      45     175 .. 0.75
   2 !   22.3   4.2   4.9e-08   9.5e-05       8     123 ..     200     327 ..     188     330 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00064
  PF00892.15  22 itayrlliagillilllfllrepialislkdilallllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvllll 125
                  t +r++ ++  ++ ++ +  ++ a++ l+  ++ ++  +++ + ++ll   al kt+ +++ +i s  Pv+t+ll  ++ g ++  + +++++  ++Gv+l +
  MMETSP1325-20131115|7850_1  75 HTYVRFIGSA--ILSAIAMGPSR-AQHELTRGASSFAPVAVCLFGANLLNSVALVKTGITVTYVIKSGIPVLTVLLC-VIQGARFPMSIYMSLLPTVVGVALAS 174
                 3444454444..33333333333.566666667888888888999*******************************9.99999999999999999999999875 PP

  == domain 2    score: 22.3 bits;  conditional E-value: 4.9e-08
  PF00892.15   8 vlskklles..vspltitayrlliagi.llilllfllrep.........ialislkdilallllgllgtv.lgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvll 123
                 v skk++++  +  + + ++++ ia+  + il+ ++++ p            ++++ +++ll++++ +   + y+l f   +++++ + s+   +  + +i+++++l+++ lt   ++givl+l+Gvl 
  MMETSP1325-20131115|7850_1 200 VTSKKASQTtnIQGFPAFFIMCCIASGlATILFYTTPS-PplfthameqLRGPDHNGYPWLLIIAAAAAYqIEYGLNFVFSSYVDPLTFSVADIARRLAIIIFGAVLFNKDLTMLNMMGIVLALVGVLT 327
                 5677777777788899999******9844444444444.46*****9997788999999999888765543889999999***********************************************86 PP

>> PF04142.10  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.2   4.2e+03      97     124 ..      35      62 ..      31      78 .. 0.70
   2 !    6.9   2.2    0.0014       2.8      31     127 ..     118     232 ..     107     234 .. 0.74
   3 !   15.8   0.5   2.8e-06    0.0055      24      96 ..     265     337 ..     257     345 .] 0.88

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 2.2
  PF04142.10  97 ekkreaeenivlGlvavlvacllsgfAg 124
                  +++++ + +v+G +  + + +ls+ A+
  MMETSP1325-20131115|7850_1  35 ATQHKFRDTVVVGTAWFMSSAVLSTWAN 62 
                 4556666666777777777777777776 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0014
  PF04142.10  31 Nnllyvalsnld.aatyqvtyqlkilttAlfsvllLkrkLstlqWasllllvlgvvlvqlkqkeseaekkrea..................eenivlGlvavlvac.llsgfAgvYf 127
                 N+l  val +   + ty++ + + +lt   +  ++ + ++ +  ++sll  v+gv+l  ++  + +    ++a                  ++  + G+ a  ++c + sg+A + f
  MMETSP1325-20131115|7850_1 118 NLLNSVALVKTGiTVTYVIKSGIPVLTV--LLCVIQGARFPMSIYMSLLPTVVGVALASASDVSFDGVGVAAAmasamaqtflnvtskkasQTTNIQGFPAFFIMCcIASGLATILF 232
                 6666666665541346888888888874..55567789999999************9999988873332222257899999*****99987555689**998776516799**9976 PP

  == domain 3    score: 15.8 bits;  conditional E-value: 2.8e-06
  PF04142.10  24 aliYtlqNnllyvalsnldaatyqvtyqlkilttAlfsvllLkrkLstlqWasllllvlgvvlvqlkqkesea 96 
                 a+ Y ++  l +v  s++d+ t++v    + l+  +f  +l ++ L++l+ + ++l ++gv + +l +++ ++
  MMETSP1325-20131115|7850_1 265 AAAYQIEYGLNFVFSSYVDPLTFSVADIARRLAIIIFGAVLFNKDLTMLNMMGIVLALVGVLTYNLLNQTLTS 337
                 789**********************************************************988887777643 PP

>> PF05488.8  PAAR motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.4   3.2e-05     0.062       9      70 ..     166     226 ..     162     231 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.2e-05
   PF05488.8   9 hhgGtvlagsstvlidgkpaAvvgdsvtCplpsgpgvIie.gssavfinglpaArvgdrtacG 70 
                 ++ G+ la +s+v++dg  +A+++ s++  +    +v ++ +s++ +i+g pa ++ + +a G
  MMETSP1325-20131115|7850_1 166 TVVGVALASASDVSFDGVGVAAAMASAMAQT--FLNVTSKkASQTTNIQGFPAFFIMCCIASG 226
                 66688899*****************999665..58888885678*********9987777655 PP

>> PF06196.7  Protein of unknown function (DUF997)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.5     3e+03      44      53 ..      49      58 ..      43      78 .. 0.66
   2 ?   -2.5   0.0       1.7   3.3e+03      36      52 ..     134     150 ..     120     162 .. 0.61
   3 ?   13.3   0.1   1.9e-05     0.038      29      56 ..     201     228 ..     191     235 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 1.5
   PF06196.7 44 lWFelsCill 53
                +WF+ s +l 
  MMETSP1325-20131115|7850_1 49 AWFMSSAVLS 58
                4665555543 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.7
   PF06196.7  36 ysyilglPlWFelsCil 52 
                 y    g+P+   l C++
  MMETSP1325-20131115|7850_1 134 YVIKSGIPVLTVLLCVI 150
                 44444555555555554 PP

  == domain 3    score: 13.3 bits;  conditional E-value: 1.9e-05
   PF06196.7  29 sskkgeeysyilglPlWFelsCillpil 56 
                 +skk+++ + i g+P+ F + Ci+  + 
  MMETSP1325-20131115|7850_1 201 TSKKASQTTNIQGFPAFFIMCCIASGLA 228
                 5677789999*************86543 PP

>> PF03840.9  Preprotein translocase SecG subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.3   0.00012      0.23      27      73 ..      14      61 ..       9      62 .. 0.66
   2 ?    0.4   0.7      0.26     5e+02      28      69 ..     184     225 ..     181     229 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00012
   PF03840.9 27 aglggafgggasqslfgsr.kaenfLtklTavlavlFfvlslllalls 73
                +g gg  ggg+++++   + +a++   + T+v+++++f  s +l+ ++
  MMETSP1325-20131115|7850_1 14 GGGGGGAGGGGGGDVGINNkRATQHKFRDTVVVGTAWFMSSAVLSTWA 61
                33333335555456655551455558899***************9875 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.26
   PF03840.9  28 glggafgggasqslfgsrkaenfLtklTavlavlFfvlslll 69 
                 g+++a+++ + q++++ ++++   t     + ++F+ ++++ 
  MMETSP1325-20131115|7850_1 184 GVAAAMASAMAQTFLNVTSKKASQTTNIQGFPAFFIMCCIAS 225
                 777888888888999888666555555556667777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       626  (0.045787); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.62u 0.47s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 1531.01
//
Query:       MMETSP1325-20131115|7860_1  [L=329]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.41s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|7866_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       409  (0.0299152); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.46s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 608.31
//
Query:       MMETSP1325-20131115|7864_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-08   34.7   1.3    8.3e-05   22.9   0.0    2.7  3  PF08238.7 Sel1 repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.2   6.8e-05      0.93      26      39 .]       2      15 ..       1      15 [. 0.89
   2 !   22.9   0.0   6.1e-09   8.3e-05       5      38 ..      20      50 ..      16      51 .. 0.85
   3 ?   -2.5   0.0       0.6   8.1e+03      28      32 ..      94      98 ..      89      98 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 6.8e-05
   PF08238.7 26 kAleWyekAAeqGh 39
                +A+ W+ekAA q++
  MMETSP1325-20131115|7864_1  2 QARAWLEKAATQDD 15
                8*********9975 PP

  == domain 2    score: 22.9 bits;  conditional E-value: 6.1e-09
   PF08238.7  5 ynLGlyymylnGlgGvpkdpekAleWyekAAeqG 38
                 +LG   my nG+ Gv++  ++A+e+y++A e+G
  MMETSP1325-20131115|7864_1 20 SQLG--TMYGNGE-GVTPSWRRARELYKRAIELG 50
                58**..4558**9.9***9*************99 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 0.6
   PF08238.7 28 leWye 32
                ++Wye
  MMETSP1325-20131115|7864_1 94 FHWYE 98
                78997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 582.56
//
Query:       MMETSP1325-20131115|7868_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.9   0.0       0.15   11.5   0.0    1.1  1  PF11272.3 Protein of unknown function (DUF3072)


Domain annotation for each model (and alignments):
>> PF11272.3  Protein of unknown function (DUF3072)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.1e-05      0.15       8      34 ..      36      62 ..      34      70 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.1e-05
   PF11272.3  8 dwvtGdePMTgaQasyLktLaeeAGee 34
                +  t  ++MT aQ +   + +++   e
  MMETSP1325-20131115|7868_1 36 EYSTTHDRMTQAQVDVVSSVCQSISAE 62
                677999***************986644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|7870_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       75  (0.00548566); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.51
# Mc/sec: 267.83
//
Query:       MMETSP1325-20131115|7871_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0035   17.0   0.8     0.0047   16.6   0.5    1.1  1  PF09430.5 Protein of unknown function (DUF2012)


Domain annotation for each model (and alignments):
>> PF09430.5  Protein of unknown function (DUF2012)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.5   3.4e-07    0.0047     100     121 ..       2      23 ..       1      26 [. 0.90

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 3.4e-07
   PF09430.5 100 rreYyeerekfsilsLlksPmi 121
                 +++Y+e+r + +++s++k+Pm 
  MMETSP1325-20131115|7871_1   2 KIQYFEPRPTITLGSFMKNPMS 23 
                 689******************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 346.14
//
Query:       MMETSP1325-20131115|7869_1  [L=555]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-08   34.1   0.0    8.3e-08   32.4   0.0    1.8  1  PF13426.1  PAS domain
     0.0076   15.9   0.1      0.021   14.4   0.0    1.8  2  PF00989.19 PAS fold
     0.0085   16.1   4.3     0.0085   16.1   3.0    2.5  2  PF12316.3  Segment polarity protein dishevelled (Dsh) C terminal
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.29   10.9   0.0    1.6  1  PF13188.1  PAS domain
       0.93    7.6   3.9        1.2    7.2   2.7    1.1  1  PF08192.6  Peptidase family S64
        1.5    6.3   6.2          2    5.9   4.3    1.1  1  PF05758.7  Ycf1
        1.5    9.3  16.5        3.1    8.3  11.4    1.5  1  PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
          2    7.9   7.1        3.9    7.0   4.9    1.4  1  PF04714.8  BCL7, N-terminal conserver region
        2.7    6.9  18.1         12    4.8   0.1    2.2  2  PF01056.13 Myc amino-terminal region


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   5.5e-11   8.3e-08      11      85 ..     437     512 ..     426     515 .. 0.90

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 5.5e-11
   PF13426.1  11 gtilfaNeaalrllGytreevlgksirdlfp.ededeeavalleraleaggevevelelrrkdgeefpvevtvtpv 85 
                  +i++aN a+ +l+Gyt ee +g ++  l+  +++d   v+ +++ + + ++ ++e++ +rkdg ++ + v+ +p+
  MMETSP1325-20131115|7869_1 437 WRIVDANMAFTQLTGYTMEEAIGSTLGLLLEgDATDISVVEAFMDDCLSHRSSSMEVTHYRKDGAPLRNFVRFFPL 512
                 58************************98776477899999**999999****************999998888887 PP

>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       2.7   4.1e+03      58      75 ..     204     221 ..     167     241 .. 0.53
   2 !   14.4   0.0   1.4e-05     0.021      22      77 ..     438     494 ..     437     504 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 2.7
                 CCHHHHHHHHHH--ECEE CS
  PF00989.19  58 laelleqlleqgeesrag 75 
                 ++++++++ ++ +e++++
  MMETSP1325-20131115|7869_1 204 RKDKMKWATAEERERQIK 221
                 444444444444444443 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.4e-05
                 -EEEETHHHHHHH-S-HHHHS---CCHHCSCCHCC.TCCHHHHHHHHHH--ECEEEE CS
  PF00989.19  22 rilyvNaaaeellGlsreevlgkslldliheedda.elaelleqlleqgeesragei 77 
                 ri+ +N a+++l+G++ ee++g++l  l+  +  +  ++e++   +++ ++s+++ +
  MMETSP1325-20131115|7869_1 438 RIVDANMAFTQLTGYTMEEAIGSTLGLLLEGDATDiSVVEAFMDDCLSHRSSSMEVT 494
                 799***********************9998887768888877777777766666554 PP

>> PF12316.3  Segment polarity protein dishevelled (Dsh) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   3.0   5.6e-06    0.0085      93     191 ..       3      97 ..       1     107 [. 0.76
   2 ?    0.3   6.7      0.37   5.7e+02      69     139 ..     125     195 ..      98     220 .. 0.62

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 5.6e-06
   PF12316.3  93 reeagekkegsgsesehssrsslsrsateeapserssaasseksvrsslserssassyaapGlpllynlaklvmkvavlssapPGaPpvRelasvPPEL 191
                 +e+ ge ++gsg   + +s +  +  + +    + s+ + + +s++ + s +s+ + +aa+  + +  l  ++++va + ++ PGaPp+ + a++ PE 
  MMETSP1325-20131115|7869_1   3 KENSGELSSGSGVSADLTSLAAHEA-KYD---MPPSVIQQHDESENGHASLPSARNDGAARAASRILVLLAMTAMVAAAPAPQPGAPPAHDRAALAPEA 97 
                 5567888888888888888866644.333...33344455666677778889999999999999999999999999998999***************96 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.37
   PF12316.3  69 qhseGsrssgsnrsdgeakrakqereeagekkegsgsesehssrsslsrsateeapserssaasseksvrs 139
                 ++   s++s+s  +d++  ++++e+ee++e +eg+  +  +s+++++ ++ ++++     + + +++s+++
  MMETSP1325-20131115|7869_1 125 KKMKASKTSASDATDTRGAEEEEEEEEEEEGNEGADTKDVDSEQAKILNRRMRNRKHAAATRRRKKESMNA 195
                 55567888888888888777777777777777776665555555555444444333333333444444444 PP

>> PF13188.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00019      0.29      20      50 ..     435     470 ..     412     487 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00019
   PF13188.1  20 d..rilevNpaalrllGys...llgellgdllpdle 50 
                    ri+++N a+ +l+Gy+    +g++lg ll++  
  MMETSP1325-20131115|7869_1 435 YpwRIVDANMAFTQLTGYTmeeAIGSTLGLLLEGDA 470
                 1468***************99999999987766654 PP

>> PF08192.6  Peptidase family S64
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   2.7   0.00079       1.2      85     179 ..     103     203 ..      27     224 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00079
   PF08192.6  85 esatsvskksgekvekslfskkdskkslstkqssytslnavae...eesktsqasskksslessqplqtln...ikeeseeskekeeeesvedelkeLeed 179
                  +at  sk++++k +++ +s k++ k+ +t+ s+ t +   +e   ee++++ +++++++  +s+ +++ln    + ++ + ++++++es++  l+eL++ 
  MMETSP1325-20131115|7869_1 103 TTATGHSKTKPSKETHNKNSPKKKMKASKTSASDATDTRGAEEeeeEEEEEEGNEGADTKDVDSEQAKILNrrmRNRKHAAATRRRKKESMNAMLEELDQL 203
                 45555555555555555555444444444444444322222220002222222233333333333333333010333333334444444444444444432 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.3    0.0013         2     230     321 ..     115     210 ..      61     229 .. 0.57

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0013
   PF05758.7 230 seieer......seeekkkeieaesekkrakqeqeeeeeedsslaseekedkdkideqeekkveekkekesilkkkisqekkkleilkelkeekelfs 321
                 +e+ ++      ++  k+  ++a+  +  +++e+eeeeee ++ a+ ++ d+++ +   +++++++k+   ++++k++  +  le+l++l+++k   +
  MMETSP1325-20131115|7869_1 115 KETHNKnspkkkMKASKTSASDATDTRGAEEEEEEEEEEEGNEGADTKDVDSEQAKI-LNRRMRNRKHAAATRRRKKESMNAMLEELDQLRKDKMK-W 210
                 222222222211333333333333333333333333344446666666666666443.33455666666677777777777778888776643333.3 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  11.4    0.0021       3.1       7      77 ..     145     215 ..     141     224 .. 0.52

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0021
   PF11942.3   7 evddeeeEee.eeedeeeelseeaefieea.eddrrhreldrrrekeeeedaeelaevlklekrYgdetesda 77 
                 e+++eeeEee  e ++ ++ + e+  i ++ +++r+h    rrr+ke+   + +l+e  +l+k+  + +++++
  MMETSP1325-20131115|7869_1 145 EEEEEEEEEEgNEGADTKDVDSEQAKILNRrMRNRKHAAATRRRKKESM--NAMLEELDQLRKDKMKWATAEE 215
                 2222222233344444444444444444447888888887777777666..6666666697776433223333 PP

>> PF04714.8  BCL7, N-terminal conserver region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.9    0.0026       3.9       2      39 ..     178     215 ..     177     229 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0026
   PF04714.8   2 sRsvRAEtRsRakDelkkviqalekvRrWEkklvlikD 39 
                 +R + A tR R k+ +  +++ l++ R+   k+ + ++
  MMETSP1325-20131115|7869_1 178 NRKHAAATRRRKKESMNAMLEELDQLRKDKMKWATAEE 215
                 89*******************************98765 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   9.9      0.02        30     199     243 ..     110     154 ..      47     196 .. 0.63
   2 ?    4.8   0.1    0.0078        12     136     199 ..     203     267 ..     191     294 .. 0.63

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.02
  PF01056.13 199 ksakvaaptpelvlrtspnsssssgedseseeeeeeeeeeeeeee 243
                 k+++ + ++++ + +++ ++s +s +d+ ++   eeeeeeeeeee
  MMETSP1325-20131115|7869_1 110 KTKPSKETHNKNSPKKKMKASKTSASDATDTRGAEEEEEEEEEEE 154
                 223333333344444444477777777777555555444444444 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.0078
  PF01056.13 136 lqaarkeaalsdssapaasarkre..kaeagaarasaaylqdlstsaseCiDPsvvfPyPlnesek 199
                 l+  + + a++++   +   r+r+  ++++ a +++++y  + ++  + C DP vv   P++   +
  MMETSP1325-20131115|7869_1 203 LRKDKMKWATAEERERQIKLRRRTwvDCTHRAFSLQTNYNSNPAA-WASCFDPNVVLVQPVTPYRS 267
                 544444444444443333333333113455556677788887755.467********999987653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1196  (0.0874781); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        97  (0.00709479); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.22u 0.40s 00:00:01.62 Elapsed: 00:00:00.76
# Mc/sec: 1749.97
//
Query:       MMETSP1325-20131115|7873_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 330.06
//
Query:       MMETSP1325-20131115|7874_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 581.34
//
Query:       MMETSP1325-20131115|7876_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   12.0   0.4       0.16   12.0   0.3    1.0  1  PF13196.1 Protein of unknown function (DUF4012)


Domain annotation for each model (and alignments):
>> PF13196.1  Protein of unknown function (DUF4012)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   1.2e-05      0.16      55      97 ..       7      51 ..       1      57 [. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.2e-05
   PF13196.1 55 deltaeeaalfg..aepalllqdvnltpdfpraaqlakemwerst 97
                ++ ta+e   ++  +ep+l  qdv + p  ++ a++a e++ +++
  MMETSP1325-20131115|7876_1  7 QQNTADESHAYSefEEPTLEAQDVEAGPKAETRASIADETYGSTE 51
                3356666667888889************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 302.15
//
Query:       MMETSP1325-20131115|7877_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 500.11
//
Query:       MMETSP1325-20131115|7867_1  [L=558]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-11   43.0   0.0    6.9e-11   41.6   0.0    1.8  1  PF02225.17 PA domain
    6.4e-06   26.8   0.0    1.4e-05   25.7   0.0    1.6  1  PF13578.1  Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF02225.17  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0     1e-14   6.9e-11      25      97 ..     144     222 ..     132     226 .. 0.92

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 1e-14
  PF02225.17  25 ddlaksdvkGkIvlvrrgvctfsekaevaqeaGAkgviiin......pseaalpggtkvgpsdvgiPvvvisradgeal 97 
                 ++l k  +kG +++ +rgvc+  +k+eva +aGA gv+++       ++  ++  + k+ ++ ++iP+v+isr+d+e+l
  MMETSP1325-20131115|7867_1 144 KELPKGYAKGFVLVAERGVCPMLSKVEVASKAGAVGVVMVQsdeglpSRMISHKLPRKEVARVIKIPAVMISRDDAEHL 222
                 56778889**********************************999988888999***********************98 PP

>> PF13578.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   2.1e-09   1.4e-05       2     105 ..     362     467 ..     361     468 .. 0.86

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 2.1e-09
   PF13578.1   2 EiGvysGvstlvllqalkrngagrlysvdpdpg.aeeaaalaeeagladrvrllkgdseealasla..dgsiDllfiDgghaaeavladleallprlapggvvlldD 105
                 EiG ++G + l+ll+ +  n + ++++++  ++  +++aa + +  + dr++++ g+s+ ++++ a   + +Dl+++Dg+   e++ adl +++++ a+  +v++ D
  MMETSP1325-20131115|7867_1 362 EIGFHRGLTGLALLDGANSNTT-TYTGFEFSDTeVSHVAAGVISRLYGDRFEMVWGNSQITVPKEAqsGRVCDLMIVDGSRMPEEATADLLNFRDLAADEHMVVMND 467
                 9*******************95.9999999885544444444456999***********9999555455679***************************99999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.36s 00:00:01.21 Elapsed: 00:00:00.54
# Mc/sec: 2476.24
//
Query:       MMETSP1325-20131115|7880_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 470.05
//
Query:       MMETSP1325-20131115|7879_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-07   29.9   0.0    2.9e-07   29.7   0.0    1.0  1  PF00025.16 ADP-ribosylation factor family
  ------ inclusion threshold ------
        0.1   12.6   0.0        0.1   12.6   0.0    1.1  1  PF08804.5  gp32 DNA binding protein like


Domain annotation for each model (and alignments):
>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   4.3e-11   2.9e-07     131     167 ..       1      36 [.       1      39 [. 0.95

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 4.3e-11
                 --HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHH CS
  PF00025.16 131 lseeelrellgleelkgkrkleiqkcsavkgeglkeg 167
                 +s++e++++lgl+ l+ +r+++iq+c+a++g+gl+eg
  MMETSP1325-20131115|7879_1   1 MSAAEMTDKLGLHGLR-HRQWYIQACCATTGDGLYEG 36 
                 7899************.******************98 PP

>> PF08804.5  gp32 DNA binding protein like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.5e-05       0.1      34      57 ..       9      31 ..       3      38 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.5e-05
   PF08804.5 34 klvnhafkkngkWyiencssthgd 57
                kl  h++++  +Wyi+ c +t+gd
  MMETSP1325-20131115|7879_1  9 KLGLHGLRH-RQWYIQACCATTGD 31
                556677765.69*********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 178.64
//
Query:       MMETSP1325-20131115|7875_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   8.7e-101  335.7   0.0   1.2e-100  335.2   0.0    1.2  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain
      3e-17   62.9   0.0    5.4e-17   62.1   0.0    1.3  1  PF00306.22 ATP synthase alpha/beta chain, C terminal domain


Domain annotation for each model (and alignments):
>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  335.2   0.0  1.8e-104  1.2e-100      11     215 .]       2     218 ..       1     218 [. 0.99

  Alignments for each domain:
  == domain 1    score: 335.2 bits;  conditional E-value: 1.8e-104
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00006.20  11 PivqGqttlipGafgcGktvisqslsknsnsdaiiyvgiGergnevaevleef.........rkepimkrttlvantsnepvaareasiytgitlAeyfrdqgknVlliaDslsrwaealreisgrlgempadqgypaylgaklaslyeRagka...gspdriGSvtivaavspaggdfsdpvttstlgitdvfivLdkklaqrkhfPaintlvSyS 215
                 P vqG+t+++pGafgcGktvisqslsk snsd+i+yvg+Gergne+aevl +f         ++ +imkrttlvantsn+pvaareasiytgitlAey+rd+g nV+++aDs+srwaealreisgrlgempad gypaylga+la +yeRag+a   gsp r+G vt+v avsp+ggdfsdpvt +tl+i++vf++LdkklaqrkhfP+ n+l+Sy+
  MMETSP1325-20131115|7875_1   2 PSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDCIVYVGCGERGNEMAEVLCDFpeltvdidgQEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYYRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRAaclGSPTREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYT 218
                 89*********************************************************999999******************************************************************************************************************************************************96 PP

>> PF00306.22  ATP synthase alpha/beta chain, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.0     8e-21   5.4e-17       3      84 ..     238     322 ..     237     342 .. 0.87

  Alignments for each domain:
  == domain 1    score: 62.1 bits;  conditional E-value: 8e-21
                 HHHHHHHHHHHHHHHHCCHHH--.TTS-HHHHHHHHHHHHHHH.HT---TTGGG...........-.HHHHHHHHHHCC----TTS- CS
  PF00306.22   3 vagklkleLaqyrElaafvqlvGsdaLseedkltlerarrlee.fLkQnqyspl....pvekqvvsiveetidlfyallrgklddlp 84 
                 ++++++++L+ ++ l ++vqlvG+++Lse++k+++e a++l+e fL+Qn++++     p++k++++ ++ ti  +y  ++  ++d p
  MMETSP1325-20131115|7875_1 238 LRNTAREILQTEDSLSEIVQLVGKESLSEDQKVVMEIAKILREdFLQQNAFTDFdytcPLNKSIGM-LK-TIITLYTCCQKAIQDSP 322
                 6899**************************************************************.88.66666666665555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.41s 00:00:01.14 Elapsed: 00:00:00.53
# Mc/sec: 1740.75
//
Query:       MMETSP1325-20131115|7883_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 330.70
//
Query:       MMETSP1325-20131115|7882_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 1362.63
//
Query:       MMETSP1325-20131115|7886_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.55    9.5   4.1        0.1   11.8   0.4    1.5  2  PF05778.7 Apolipoprotein CIII (Apo-CIII)


Domain annotation for each model (and alignments):
>> PF05778.7  Apolipoprotein CIII (Apo-CIII)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1      0.42   5.8e+03      35      41 ..      47      53 ..      42      55 .. 0.71
   2 ?   11.8   0.4   7.6e-06       0.1      14      38 ..      97     121 ..      89     127 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 0.42
                HHHH--- CS
   PF05778.7 35 AqqARgW 41
                  +AR W
  MMETSP1325-20131115|7886_1 47 SANARAW 53
                5689999 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 7.6e-06
                 -HHHHGGGHHHHHHGGGGGGGHHHH CS
   PF05778.7  14 YmkqAtktakdaLssvqESqvAqqA 38 
                   +qAt+  ++ L  v ES +A+qA
  MMETSP1325-20131115|7886_1  97 LSQQATHGTQQSLLDVAESSIAKQA 121
                 569*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.59
# Mc/sec: 686.41
//
Query:       MMETSP1325-20131115|7890_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   12.0   1.8       0.19   11.6   1.3    1.4  1  PF14346.1 Domain of unknown function (DUF4398)


Domain annotation for each model (and alignments):
>> PF14346.1  Domain of unknown function (DUF4398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.3   1.4e-05      0.19      56      83 ..      20      47 ..       3      52 .] 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.4e-05
   PF14346.1 56 laegkyeeArrlaeqAeadaelAeakae 83
                lae+   +A +l+ +A+ dae Ae+   
  MMETSP1325-20131115|7890_1 20 LAEEYATDAVDLLFEAIIDAEVAEEAHA 47
                6788899***************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|7887_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-14   51.1   0.1    5.4e-09   35.2   0.0    2.9  2  PF06565.7 Repeat of unknown function (DUF1126)


Domain annotation for each model (and alignments):
>> PF06565.7  Repeat of unknown function (DUF1126)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.0     4e-13   5.4e-09       3      33 .]     125     155 ..     123     155 .. 0.95
   2 !   12.8   0.1   4.1e-06     0.056       1      14 [.     320     333 ..     320     337 .. 0.93

  Alignments for each domain:
  == domain 1    score: 35.2 bits;  conditional E-value: 4e-13
                 EEETTTTEEEEE-------------EEEEE- CS
   PF06565.7   3 sYyLaDDTisIfEppvrNSGrpgGkfLrRqr 33 
                  ++LaD++i+  E ++ NSG p+G+f+ R++
  MMETSP1325-20131115|7887_1 125 DFFLADNSIAMNETKIANSGLPQGRFVARTK 155
                 69***************************97 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 4.1e-06
                 EEEEETTTTEEEEE CS
   PF06565.7   1 visYyLaDDTisIf 14 
                 +++Y+++DDT++++
  MMETSP1325-20131115|7887_1 320 TLHYFVSDDTLEVK 333
                 69**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.39s 00:00:01.10 Elapsed: 00:00:00.53
# Mc/sec: 1822.14
//
Query:       MMETSP1325-20131115|7892_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 366.24
//
Query:       MMETSP1325-20131115|7893_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-20   71.2   0.0    1.3e-19   70.3   0.0    1.4  1  PF08264.8 Anticodon-binding domain of tRNA
    3.8e-13   49.1   5.6    3.8e-13   49.1   3.9    1.7  2  PF10458.4 Valyl tRNA synthetase tRNA binding arm


Domain annotation for each model (and alignments):
>> PF08264.8  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0   1.8e-23   1.3e-19      47     149 ..       3     105 ..       1     111 [. 0.84

  Alignments for each domain:
  == domain 1    score: 70.3 bits;  conditional E-value: 1.8e-23
   PF08264.8  47 vkprlysesaeds.rr.aqtvlaevletllrllaPfmPfltEelwqrleeellgkkesimlaewPe.dseel..eeeleeeevellkeivkairklrselkikpssel 149
                 +k r+ +++++++ ++ ++ vl +v++t lrll+PfmP++tE l+q+l      k++ +m ++wP+ d+++l  +e++  e+++ l+++v+air++r+e+++ p +++
  MMETSP1325-20131115|7893_1   3 SKTRMVGDASTAEtQArTRRVLTYVFDTCLRLLHPFMPYVTEILYQQLP----RKDDALMISQWPQmDDTPLctDEAA-VEQYSALQSLVRAIRNARAEYQVEPGKKI 105
                 5777766666666766699**************************7662....34588*******9999888976666.89**********************99883 PP

>> PF10458.4  Valyl tRNA synthetase tRNA binding arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2      0.76   5.2e+03      37      57 ..     106     126 ..     103     129 .. 0.57
   2 !   49.1   3.9   5.6e-17   3.8e-13       1      66 []     171     236 ..     171     236 .. 0.96

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 0.76
   PF10458.4  37 PaeVVeeekaklaeleeqlek 57 
                  a+VV +  a  a+le+++++
  MMETSP1325-20131115|7893_1 106 AANVVVADAALRAALENEAAV 126
                 566666666655555555554 PP

  == domain 2    score: 49.1 bits;  conditional E-value: 5.6e-17
   PF10458.4   1 DlekeraRLeKelaklekeierlqkKLsnpgFvakAPaeVVeeekaklaeleeqleklkerLsqLk 66 
                 D  ke +RL+K+ +klek++ +l+k+L  +gF++kA +eVV e+k++l e +e l  +++ L  Lk
  MMETSP1325-20131115|7893_1 171 DPVKEAKRLTKQFDKLEKDVVGLEKRLGSSGFLKKASEEVVAETKQQLDEKKERLSTIQKSLDALK 236
                 6679**********************************************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       956  (0.0699239); expected 273.4 (0.02)
Passed bias filter:                      627  (0.0458602); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.49
# Mc/sec: 1168.84
//
Query:       MMETSP1325-20131115|7891_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-11   41.5   0.1    5.8e-11   41.4   0.0    1.0  1  PF00067.17 Cytochrome P450


Domain annotation for each model (and alignments):
>> PF00067.17  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   4.3e-15   5.8e-11     397     453 ..       2      56 ..       1      65 [. 0.81

  Alignments for each domain:
  == domain 1    score: 41.4 bits;  conditional E-value: 4.3e-15
                 SCCTT--TT-----S----HHHHHHHHHHHHHHHHHEEEEETCSS-CCCEESS--SE CS
  PF00067.17 397 rksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqpetdpppileksgll 453
                 + ++a+l+FG G ++C G++++++++k +latl++++e+e+   +  p ++ + +++
  MMETSP1325-20131115|7891_1   2 KTPYAYLGFGGGMHQCMGQQFGYLQVKTILATLFSKYEIEM--LGPLPEPDYTAMVV 56 
                 679*************************************7..45666666654444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 380.29
//
Query:       MMETSP1325-20131115|7894_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 537.96
//
Query:       MMETSP1325-20131115|7896_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-10   38.5   1.3       0.42   10.7   0.0    5.1  5  PF13516.1  Leucine Rich repeat
    2.6e-05   23.7   0.0      0.011   15.3   0.0    2.4  2  PF13855.1  Leucine rich repeat
    0.00012   21.4   0.1          3    8.1   0.0    4.6  3  PF00560.28 Leucine Rich Repeat
    0.00023   20.6   0.0        1.2    8.6   0.0    3.3  4  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.026   13.9   4.6        3.3    7.1   2.5    2.8  3  PF04528.8  Adenovirus early E4 34 kDa protein conserved region
       0.17   11.3   4.6       0.19   11.1   3.2    1.1  1  PF09534.5  Tryptophan-associated transmembrane protein (Trp_oprn_chp)
       0.18   11.9   5.6        4.3    7.5   0.4    2.7  2  PF13262.1  Protein of unknown function (DUF4054)
       0.32   10.8   2.7        3.9    7.4   0.2    2.8  3  PF13466.1  STAS domain


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00024      0.42       1      23 [.       3      26 ..       3      27 .. 0.92
   2 ?    4.4   0.0     0.026        45       1      23 [.      29      52 ..      29      53 .. 0.84
   3 !    7.8   0.0    0.0021       3.6       1      23 [.      55      78 ..      55      79 .. 0.82
   4 !    7.3   0.0     0.003       5.1       1      23 [.      81     104 ..      81     105 .. 0.88
   5 ?    3.3   0.0     0.062   1.1e+02       1      16 [.     107     123 ..     107     130 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00024
   PF13516.1  1 lknLtsLdL.snNqigdeGlsaLa 23
                + nLt+ dL ++++i+d  + aLa
  MMETSP1325-20131115|7896_1  3 CANLTTVDLkGFTNITDAAVIALA 26
                77*******899********9998 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.026
   PF13516.1  1 lknLtsLdLsn.NqigdeGlsaLa 23
                + +Lt+++L +  +i+d  + aLa
  MMETSP1325-20131115|7896_1 29 CAKLTTIRLRHgDNITDAAVIALA 52
                6689*****86478****999998 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0021
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaLa 23
                + +Lt++d++++  ++d  + +La
  MMETSP1325-20131115|7896_1 55 CAKLTTIDIGGCEkLTDTAITSLA 78
                668*********659998887776 PP

  == domain 4    score: 7.3 bits;  conditional E-value: 0.003
   PF13516.1   1 lknLtsLdLsnNq.igdeGlsaLa 23 
                 + nLts+d+  +  ++d  + aLa
  MMETSP1325-20131115|7896_1  81 CANLTSIDVTCCSkLTDAAVTALA 104
                 77********99659**9999997 PP

  == domain 5    score: 3.3 bits;  conditional E-value: 0.062
   PF13516.1   1 lknLtsLdLsnNq.igd 16 
                 ++nLt   L ++  ++d
  MMETSP1325-20131115|7896_1 107 CTNLTAVYLHYCTcVTD 123
                 9********99974665 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00046      0.78       2      59 ..       5      66 ..       4      69 .. 0.82
   2 !   15.3   0.0   6.4e-06     0.011       2      59 ..      57     118 ..      56     121 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00046
   PF13855.1  2 nLkeLdLs.nNrlkvipdgaFk.glsnLkvLdLs.gnnlksisp.eafkgLpsLreLnLsgN 59
                nL+++dL+ ++++++ +  a+  ++ +L+++ L  g+n++      +  ++ +L+ +++ g+
  MMETSP1325-20131115|7896_1  5 NLTTVDLKgFTNITDAAVIALAtHCAKLTTIRLRhGDNITDAAViALATHCAKLTTIDIGGC 66
                89999**955889999998888799*********9999987755145789999999998776 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 6.4e-06
   PF13855.1   2 nLkeLdLsnN.rlkvipdgaFk.glsnLkvLdLs.gnnlksi.speafkgLpsLreLnLsgN 59 
                 +L+++d+ ++ +l++ + +++  ++ nL+++d + + +l+    + + +++++L+ ++L+++
  MMETSP1325-20131115|7896_1  57 KLTTIDIGGCeKLTDTAITSLAtHCANLTSIDVTcCSKLTDAaVTALAAHCTNLTAVYLHYC 118
                 799******999998865555559**********888898662555689**********986 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.14   2.4e+02       2      14 ..       6      19 ..       2      51 .. 0.59
   2 !    8.1   0.0    0.0018         3       1      15 [.      57      77 ..      57     118 .. 0.73
   3 ?    1.1   0.0      0.33   5.6e+02       1      14 [.     109     123 ..     109     136 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.14
                ESEEEETSS.BCBC CS
  PF00560.28  2 LeeLdLsgN.nlts 14
                L++ dL g  n+t+
  MMETSP1325-20131115|7896_1  6 LTTVDLKGFtNITD 19
                55555555334443 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0018
                TESEEEETSS.BCBC.....H CS
  PF00560.28  1 nLeeLdLsgN.nlts.....l 15
                +L+++d+ g+ +lt+     l
  MMETSP1325-20131115|7896_1 57 KLTTIDIGGCeKLTDtaitsL 77
                578888888888885464441 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.33
                 TESEEEETSS.BCBC CS
  PF00560.28   1 nLeeLdLsgN.nlts 14 
                 nL+  +L ++ ++t+
  MMETSP1325-20131115|7896_1 109 NLTAVYLHYCtCVTD 123
                 79999*****88876 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00072       1.2       2      41 ..       5      48 ..       4      52 .. 0.78
   2 !    7.4   0.0    0.0018         3       2      40 ..      31      75 ..      30      79 .. 0.74
   3 !    6.9   0.0    0.0026       4.4       2      38 ..      57      97 ..      56     105 .. 0.64
   4 ?    2.8   0.0     0.048        82       2      33 ..      83     117 ..      82     125 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00072
   PF12799.2  2 nLevLdLsn.NnIkdlppela...nLpnLktLnLsn.Npisdlsa 41
                nL+++dL + +nI+d    +a    + +L+t+ L +  +i+d  +
  MMETSP1325-20131115|7896_1  5 NLTTVDLKGfTNITDAAV-IAlatHCAKLTTIRLRHgDNITDAAV 48
                9*******99****9666.44335899******997358888654 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0018
   PF12799.2  2 nLevLdLsn.NnIkdlppela...nLpnLktLnLsnN.pisd..ls 40
                +L+++ L++  nI+d    +a    + +L+t+++ ++ +++d  ++
  MMETSP1325-20131115|7896_1 31 KLTTIRLRHgDNITDAAV-IAlatHCAKLTTIDIGGCeKLTDtaIT 75
                688999997689999665.44335899*********9678874455 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0026
   PF12799.2  2 nLevLdLsnN.nIkd..lppela.nLpnLktLnLsnN.pisd 38
                +L+++d+ ++ +++d  +   la  + nL++++++ + +++d
  MMETSP1325-20131115|7896_1 57 KLTTIDIGGCeKLTDtaITS-LAtHCANLTSIDVTCCsKLTD 97
                68888877774466555666.632677777777777655666 PP

  == domain 4    score: 2.8 bits;  conditional E-value: 0.048
   PF12799.2   2 nLevLdLsnN.nIkd..lppel.anLpnLktLnLsn 33 
                 nL+++d + + +++d  + + l a ++nL+  +L +
  MMETSP1325-20131115|7896_1  83 NLTSIDVTCCsKLTDaaVTA-LaAHCTNLTAVYLHY 117
                 67777777752477644555.546788887777765 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.064   1.1e+02      75     102 ..      17      44 ..       7      58 .. 0.76
   2 ?    4.1   0.0     0.017        29      75     109 ..      43      77 ..      40      80 .. 0.85
   3 ?    7.1   2.5     0.002       3.3      84     129 ..      78     123 ..      66     132 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.064
   PF04528.8  75 llnnlvvlvCksCaelseisvrcCarrt 102
                 +++  v+ + ++Ca+l+ i++r+  + t
  MMETSP1325-20131115|7896_1  17 ITDAAVIALATHCAKLTTIRLRHGDNIT 44 
                 567789999999*****99999865555 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.017
   PF04528.8  75 llnnlvvlvCksCaelseisvrcCarrtrellrra 109
                 +++  v+ + ++Ca+l+ i +  C + t   + ++
  MMETSP1325-20131115|7896_1  43 ITDAAVIALATHCAKLTTIDIGGCEKLTDTAITSL 77 
                 5677899999**************99998888765 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.002
   PF04528.8  84 CksCaelseisvrcCarrtrellrralkllekrtvslkqlkrsrte 129
                  ++Ca+l+ i v cC + t + +  ++  + + t +  +  ++ t+
  MMETSP1325-20131115|7896_1  78 ATHCANLTSIDVTCCSKLTDAAVTALAAHCTNLTAVYLHYCTCVTD 123
                 579******************9999999888887766555555555 PP

>> PF09534.5  Tryptophan-associated transmembrane protein (Trp_oprn_chp)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.2   0.00011      0.19      35     142 ..       7     117 ..       2     132 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00011
   PF09534.5  35 ktvtltGatwstallpLALlllAAavaalavrgwgrrvlavLlaaasagvaylavsllvspdvaera.adl....aevpvakalegvsr.sawgavvallaaalallagvllvr 142
                 +tv+l+G t  t ++ +AL+   A    + +r       a+++a+a   + +  + +   ++ ++ a ++l    a++++ +    +   + + a v+ laa ++ l++v l  
  MMETSP1325-20131115|7896_1   7 TTVDLKGFTNITDAAVIALATHCAKLTTIRLRHGDNITDAAVIALATHCAKLTTIDIGGCEKLTDTAiTSLathcANLTSID---VTCCsKLTDAAVTALAAHCTNLTAVYLHY 117
                 7999***************************************************996544444443134442224444444...33330333478999**********99865 PP

>> PF13262.1  Protein of unknown function (DUF4054)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.4    0.0025       4.3       8      54 ..      14      62 ..       7      79 .. 0.78
   2 ?    6.8   0.5     0.004       6.9      11      51 ..      69     111 ..      61     128 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0025
   PF13262.1  8 fad.vpddaieaaledAklllsakrwgd.lreralallaaHlltldgaa 54
                f++  ++++i+ a + Akl +   r gd +++ a+ +la H ++l + +
  MMETSP1325-20131115|7896_1 14 FTNiTDAAVIALATHCAKLTTIRLRHGDnITDAAVIALATHCAKLTTID 62
                67755666777777778888888899999*************9998765 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.004
   PF13262.1  11 vpddaieaaledAklllsak..rwgdlreralallaaHlltld 51 
                 + d ai+ + +  ++l+s +  ++++l++ a+ +laaH   l 
  MMETSP1325-20131115|7896_1  69 LTDTAITSLATHCANLTSIDvtCCSKLTDAAVTALAAHCTNLT 111
                 55666666666665555555647788************98775 PP

>> PF13466.1  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.15   2.5e+02      30      48 ..       8      26 ..       4      44 .. 0.69
   2 ?    0.6   0.0      0.29     5e+02      18      45 ..      46      75 ..      34      82 .. 0.63
   3 ?    7.4   0.2    0.0023       3.9      33      59 ..      81     107 ..      75     113 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.15
   PF13466.1 30 vvDlsgvervDsaglalLl 48
                +vDl+g + +  a++ +L+
  MMETSP1325-20131115|7896_1  8 TVDLKGFTNITDAAVIALA 26
                7899999998555554443 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.29
   PF13466.1 18 allealaag..advvvDlsgvervDsagla 45
                a   ala++  +  ++D +g+e +  +++ 
  MMETSP1325-20131115|7896_1 46 AAVIALATHcaKLTTIDIGGCEKLTDTAIT 75
                555566666644457888888877666555 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0023
   PF13466.1  33 lsgvervDsaglalLlrlarrarargr 59 
                 +++++++D+++++ L  +a +a a+++
  MMETSP1325-20131115|7896_1  81 CANLTSIDVTCCSKLTDAAVTALAAHC 107
                 689*******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 679.78
//
Query:       MMETSP1325-20131115|7897_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0035   17.1   0.5         11    6.3   0.0    3.5  4  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.3   0.0    0.0034        47       7      22 ..       1      17 [.       1      19 [. 0.87
   2 ?    2.5   0.0     0.013   1.8e+02       2      24 .]      25      47 ..      24      47 .. 0.88
   3 !    6.3   0.0   0.00079        11       3      16 ..      53      66 ..      52      68 .. 0.86
   4 ?   -3.1   0.0       0.9   1.2e+04      12      16 ..      75      79 ..      73      87 .. 0.56

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0034
   PF13516.1  7 LdLsnNq.igdeGlsaL 22
                L+L +N+ +g+eG+  L
  MMETSP1325-20131115|7897_1  1 LRLDGNPlLGGEGVAEL 17
                8999**978****9877 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.013
   PF13516.1  2 knLtsLdLsnNqigdeGlsaLan 24
                ++L  L L ++  ++ G+  +++
  MMETSP1325-20131115|7897_1 25 TSLIALTLTHCAMDNRGMREICK 47
                6788899**********999986 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.00079
   PF13516.1  3 nLtsLdLsnNqigd 16
                + ++Ld+s+N +g+
  MMETSP1325-20131115|7897_1 53 SFQELDVSYNMLGG 66
                6689******9985 PP

  == domain 4    score: -3.1 bits;  conditional E-value: 0.9
   PF13516.1 12 Nqigd 16
                N+ g+
  MMETSP1325-20131115|7897_1 75 NNKGK 79
                54443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.32s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 670.98
//
Query:       MMETSP1325-20131115|7899_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-05   22.7   0.0    3.9e-05   22.6   0.0    1.0  1  PF10186.4 UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   2.9e-09   3.9e-05     166     225 ..      20      81 ..       4      95 .. 0.76

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 2.9e-09
   PF10186.4 166 rkseessstys.Iggtplvdlrdln.slpaetisasLtyiaqLlnllshyLsvrLPaeitlp 225
                 ++++  + + +   g+pl++   l+ s+p e +s++L+ +a+L++ ls+ L+v LP+ i+++
  MMETSP1325-20131115|7899_1  20 KAGDDGAAQTDtVMGLPLPSDLFLWaSMPDELLSSALGMAAKLVMSLSQALAVALPHPIFPS 81 
                 3443334444447788888766555269******************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 542.85
//
Query:       MMETSP1325-20131115|7898_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.22   11.1  19.6       0.27   10.9   0.3    4.4  4  PF02757.12 YLP motif
       0.95    8.9   5.3        0.5    9.8   0.3    2.1  2  PF02668.11 Taurine catabolism dioxygenase TauD, TfdA family


Domain annotation for each model (and alignments):
>> PF02757.12  YLP motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.3     0.027   1.9e+02       1       9 []      63      71 ..      63      71 .. 0.85
   2 ?    9.6   0.9    0.0001      0.71       2       9 .]      80      87 ..      79      87 .. 0.86
   3 ?   -1.5   0.2      0.47   3.2e+03       3       7 ..     145     149 ..     145     150 .. 0.82
   4 ?   10.9   0.3     4e-05      0.27       2       9 .]     160     167 ..     159     167 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.027
  PF02757.12  1 snEYLPPve 9 
                s EY PP++
  MMETSP1325-20131115|7898_1 63 SLEYVPPAQ 71
                679*9**96 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0001
  PF02757.12  2 nEYLPPve 9 
                +EYLPP++
  MMETSP1325-20131115|7898_1 80 SEYLPPSQ 87
                7*****86 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 0.47
  PF02757.12   3 EYLPP 7  
                 EY PP
  MMETSP1325-20131115|7898_1 145 EYVPP 149
                 89899 PP

  == domain 4    score: 10.9 bits;  conditional E-value: 4e-05
  PF02757.12   2 nEYLPPve 9  
                  EYLPP++
  MMETSP1325-20131115|7898_1 160 AEYLPPAQ 167
                 7*****96 PP

>> PF02668.11  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.3     0.026   1.8e+02      96     121 ..       6      31 ..       2      37 .. 0.84
   2 ?    9.8   0.3   7.3e-05       0.5      84     149 ..      90     157 ..      44     171 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.026
                 .--SB-S-TTSSS----EEEEEEE-- CS
  PF02668.11  96 alplHtDlsylesppgvqlLhclenp 121
                 a+  HtD + l+++p   lLh+l ++
  MMETSP1325-20131115|7898_1   6 AQATHTDALALDHVPPSHLLHALLAA 31 
                 5778*****9999999999*998665 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 7.3e-05
                 SSGGG----....--SB-S-TTSSS----EEEEEEE-------EEEB-..--HHHHHHHHHHHHHHTT CS
  PF02668.11  84 kdaaytpedttralplHtDlsylesppgvqlLhclenpaeGGetlfvd..gfaaynaLspelkellae 149
                  + a++p d  +a+ +H+D + +++ p   lLh+l ++++    + ++   + a+++++p   e+l+e
  MMETSP1325-20131115|7898_1  90 HSLAPDPDDLPAAQAMHSDALTFDHEPASHLLHALLAAPSSSXAMQASheAAPAFEYVPPTHAEQLRE 157
                 4555566667778********999999999*****998876666666655777888888888888864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 822.28
//
Query:       MMETSP1325-20131115|7900_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   15.1   0.1        4.3    7.6   0.0    2.3  2  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0016        21      13      24 .]      59      70 ..      52      70 .. 0.82
   2 ?    7.6   0.0   0.00031       4.3       4      18 ..      75      89 .]      72      89 .] 0.87

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0016
   PF13516.1 13 qigdeGlsaLan 24
                 i+d G++aLa+
  MMETSP1325-20131115|7900_1 59 RITDVGAQALAS 70
                49********95 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.00031
   PF13516.1  4 LtsLdLsnNqigdeG 18
                Lt++ Lsn+q+gd G
  MMETSP1325-20131115|7900_1 75 LTVIGLSNTQVGDAG 89
                99999********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|7901_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|7902_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.04   13.7   0.2      0.043   13.5   0.1    1.1  1  PF11625.3 Protein of unknown function (DUF3253)


Domain annotation for each model (and alignments):
>> PF11625.3  Protein of unknown function (DUF3253)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.1e-06     0.043       6      43 ..      13      50 ..       9      52 .] 0.82

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.1e-06
                HHHHHHHHHHHHHS-TT--B-HHHHHHHH-TTS-GGGH CS
   PF11625.3  6 aeieaailallaargpgksiCPsevAralapdaWrelm 43
                + i aa  +ll+++ +++s CP + A    +++ r +m
  MMETSP1325-20131115|7902_1 13 HMIIAAAHRLLTRASQAASACPDDLAITTIRTDSRVRM 50
                66788999*****************9887777666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.89
# Mc/sec: 140.01
//
Query:       MMETSP1325-20131115|7903_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|7905_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.46
# Mc/sec: 406.34
//
Query:       MMETSP1325-20131115|7908_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.084   12.8   0.5       0.11   12.4   0.3    1.2  1  PF12235.3 Fragile X-related 1 protein C terminal


Domain annotation for each model (and alignments):
>> PF12235.3  Fragile X-related 1 protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   8.1e-06      0.11      93     128 ..      16      50 ..       1      58 [. 0.68

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.1e-06
   PF12235.3  93 agdedreprsrrdsrrrrggrgRgqagrgrggggkg 128
                  ++ed e+  r+++ rr+  +g+g++ +g+ g+gk+
  MMETSP1325-20131115|7908_1  16 MSKEDFEAVVRKEEERRKSNKGKGKGKKGK-GKGKK 50 
                 345689999999988888777777777776.44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 550.65
//
Query:       MMETSP1325-20131115|7907_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 1310.01
//
Query:       MMETSP1325-20131115|7909_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|7911_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   13.8   0.4      0.031   13.4   0.3    1.3  1  PF11734.3 TilS substrate C-terminal domain


Domain annotation for each model (and alignments):
>> PF11734.3  TilS substrate C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3   2.2e-06     0.031       7      40 ..      27      64 ..      22      66 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.2e-06
   PF11734.3  7 rggerlrp....agrggsrklKkllqeagvPpwlRdri 40
                r++er r+      +++  +lK+   +a+vPp lR r+
  MMETSP1325-20131115|7911_1 27 REKERQRMlmdnEAKKHEASLKQATDDAQVPPRLRVRV 64
                55555555222234888999***************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       747  (0.0546372); expected 273.4 (0.02)
Passed bias filter:                      478  (0.034962); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 327.67
//
Query:       MMETSP1325-20131115|7912_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-17   62.6  12.9    2.8e-09   36.3   0.5    3.8  3  PF13414.1  TPR repeat
    2.6e-16   59.6  16.0    1.4e-08   35.0   2.3    3.1  3  PF13432.1  Tetratricopeptide repeat
    8.9e-15   53.4   1.2    0.00032   20.5   0.0    4.3  4  PF13431.1  Tetratricopeptide repeat
    1.6e-10   40.5   9.3     0.0048   17.2   0.1    4.3  4  PF13428.1  Tetratricopeptide repeat
    4.6e-09   35.9  13.2    0.00022   20.9   2.2    3.0  3  PF13424.1  Tetratricopeptide repeat
    9.7e-09   35.0   1.1      0.059   13.7   0.0    4.3  4  PF13174.1  Tetratricopeptide repeat
    1.6e-08   33.6   5.2      0.014   15.0   0.0    4.8  5  PF13181.1  Tetratricopeptide repeat
    5.8e-06   25.7  19.4     0.0043   16.7   0.1    5.5  5  PF07719.12 Tetratricopeptide repeat
      2e-05   23.8  19.9      0.058   12.9   0.2    6.6  6  PF00515.23 Tetratricopeptide repeat
     0.0024   17.8  12.6        1.3    9.0   0.1    4.0  4  PF12583.3  Tripeptidyl peptidase II N terminal
     0.0045   16.5   9.1        4.6    7.1   0.0    4.5  4  PF13176.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.3  11.2        1.7    8.5   0.1    4.9  5  PF13374.1  Tetratricopeptide repeat
      0.036   14.5   6.7       0.87   10.2   0.2    4.2  4  PF08238.7  Sel1 repeat
      0.068   12.0   2.1        1.9    7.2   1.4    2.7  1  PF02259.18 FAT domain
       0.11   11.5   0.1       0.49    9.4   0.0    1.9  1  PF10373.4  Est1 DNA/RNA binding domain
        1.3    8.8   5.4        2.2    8.0   0.9    2.4  2  PF13371.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.5   3.2e-12   2.8e-09      13      69 .]      16      72 ..       4      72 .. 0.95
   2 !   21.6   0.1   1.3e-07   0.00011      15      48 ..      53      86 ..      52      91 .. 0.92
   3 !   24.8   1.2   1.3e-08   1.1e-05       4      64 ..      76     143 ..      73     148 .. 0.85

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 3.2e-12
   PF13414.1 13 lfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                + +++d d A++ay+ A+e dp+ a ++ nl+l++++  kd + A ++y++A++ dP
  MMETSP1325-20131115|7912_1 16 FSTQKDVDAAEAAYRMAIEADPELAHAHVNLGLLLQNERKDVDGAEAAYREAIKKDP 72
                55799*************************************************998 PP

  == domain 2    score: 21.6 bits;  conditional E-value: 1.3e-07
   PF13414.1 15 kegdydeAieayekAleldpnnaelyynlAlayl 48
                +++d d+A++ay++A++ dp+  ++++nl+ +++
  MMETSP1325-20131115|7912_1 53 ERKDVDGAEAAYREAIKKDPKLTQAHNNLGILLQ 86
                6899**************************9876 PP

  == domain 3    score: 24.8 bits;  conditional E-value: 1.3e-08
   PF13414.1   4 ealkelGnalfkeg.dydeAieayekAleldpnnaelyynlAlaylklg.....k.dyeeAledyekA 64 
                 +a+++lG  l +e+ d+++A++ay+ A+e ++++  +++nl+ +++ +g     + d  +A++++e+A
  MMETSP1325-20131115|7912_1  76 QAHNNLGILLQTERyDLEGAEKAYRSAIETESEDTHAHLNLGIILWGRGpqaeeDgDLAAAARYFEEA 143
                 79*********9888*********************************95444313456888888887 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   2.3   1.7e-11   1.4e-08       9      63 ..      18      73 ..      13      75 .. 0.95
   2 !   25.7   0.1   1.4e-08   1.2e-05      10      61 ..      54     106 ..      52     110 .. 0.88
   3 !   20.2   0.7   7.1e-07   0.00061      12      60 ..      91     146 ..      84     150 .. 0.95

  Alignments for each domain:
  == domain 1    score: 35.0 bits;  conditional E-value: 1.7e-11
   PF13432.1  9 raGdydeAlaaleaalalaPeaaeallllaeall.rlgrldeAaallraalalaPd 63
                 ++d+d+A+aa++ a++++Pe a a+ +l+ +l  +++++d+A+a++r+a++ +P+
  MMETSP1325-20131115|7912_1 18 TQKDVDAAEAAYRMAIEADPELAHAHVNLGLLLQnERKDVDGAEAAYREAIKKDPK 73
                689*******************************999****************996 PP

  == domain 2    score: 25.7 bits;  conditional E-value: 1.4e-08
   PF13432.1  10 aGdydeAlaaleaalalaPeaaeallllaeall.rlgrldeAaallraalala 61 
                 ++d+d A+aa+++a++++P+  +a+ +l+ +l  ++ +l++A++++r+a++  
  MMETSP1325-20131115|7912_1  54 RKDVDGAEAAYREAIKKDPKLTQAHNNLGILLQtERYDLEGAEKAYRSAIETE 106
                 789******************************7777777777*****99655 PP

  == domain 3    score: 20.2 bits;  conditional E-value: 7.1e-07
   PF13432.1  12 dydeAlaaleaalalaPeaaeallllaeallrl.......grldeAaallraalal 60 
                 d++ A++a++ a++ + e+  a+l+l+ +l+ +       g+l++Aa+++++a++l
  MMETSP1325-20131115|7912_1  91 DLEGAEKAYRSAIETESEDTHAHLNLGIILWGRgpqaeedGDLAAAARYFEEAAGL 146
                 6899***************************999******************9876 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.36   3.1e+02      11      33 ..       2      26 ..       1      27 [. 0.79
   2 !   18.6   0.0   1.5e-06    0.0013       1      33 [.      28      61 ..      28      62 .. 0.87
   3 !   20.5   0.0   3.7e-07   0.00032       1      33 [.      63      96 ..      63      97 .. 0.82
   4 !    8.3   0.0     0.003       2.6       1      24 [.      98     121 ..      98     138 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.36
   PF13431.1 11 nnadaynnLAelll..nnGdleeAe 33
                ++a+a++  + ll+   ++d + Ae
  MMETSP1325-20131115|7912_1  2 THAPAHYHIGDLLHfsTQKDVDAAE 26
                6899*******99966667777776 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 1.5e-06
   PF13431.1  1 lyekaleldPnnadaynnLAellln.nGdleeAe 33
                +y+ a+e dP+ a a+ nL++ll+n ++d + Ae
  MMETSP1325-20131115|7912_1 28 AYRMAIEADPELAHAHVNLGLLLQNeRKDVDGAE 61
                5999*******************97367888887 PP

  == domain 3    score: 20.5 bits;  conditional E-value: 3.7e-07
   PF13431.1  1 lyekaleldPnnadaynnLAelllnnG.dleeAe 33
                +y++a+++dP+ ++a+nnL+ ll+    dle Ae
  MMETSP1325-20131115|7912_1 63 AYREAIKKDPKLTQAHNNLGILLQTERyDLEGAE 96
                6*********************995332666665 PP

  == domain 4    score: 8.3 bits;  conditional E-value: 0.003
   PF13431.1   1 lyekaleldPnnadaynnLAelll 24 
                 +y+ a+e + +++ a+ nL+ +l 
  MMETSP1325-20131115|7912_1  98 AYRSAIETESEDTHAHLNLGIILW 121
                 6999****************9985 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.3   6.5e-05     0.056      11      42 ..      16      47 ..       6      49 .. 0.88
   2 !   17.2   0.1   5.7e-06    0.0048      11      42 ..      51      82 ..      42      84 .. 0.82
   3 !   10.6   0.0    0.0008      0.68      12      42 ..      87     117 ..      76     119 .. 0.80
   4 ?    4.0   0.2       0.1        88      12      28 ..     128     144 ..     120     150 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 6.5e-05
   PF13428.1 11 llalGdpdeAiallrralalaPddaealllLa 42
                +  + d+d+A+a++r a++++P+ a a+ +L+
  MMETSP1325-20131115|7912_1 16 FSTQKDVDAAEAAYRMAIEADPELAHAHVNLG 47
                56789******************999999987 PP

  == domain 2    score: 17.2 bits;  conditional E-value: 5.7e-06
   PF13428.1 11 llalGdpdeAiallrralalaPddaealllLa 42
                + ++ d+d+A+a++r+a++++P+  +a+ +L+
  MMETSP1325-20131115|7912_1 51 QNERKDVDGAEAAYREAIKKDPKLTQAHNNLG 82
                35689******************999998887 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 0.0008
   PF13428.1  12 lalGdpdeAiallrralalaPddaealllLa 42 
                  ++ d+++A++++r a+++  +d  a+l+L+
  MMETSP1325-20131115|7912_1  87 TERYDLEGAEKAYRSAIETESEDTHAHLNLG 117
                 456699********************99997 PP

  == domain 4    score: 4.0 bits;  conditional E-value: 0.1
   PF13428.1  12 lalGdpdeAiallrral 28 
                 ++ Gd+++A++++++a+
  MMETSP1325-20131115|7912_1 128 EEDGDLAAAARYFEEAA 144
                 5679**********995 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   1.5   6.7e-07   0.00057       7      74 ..       6      69 ..       3      73 .. 0.84
   2 !   20.9   2.2   2.6e-07   0.00022       2      74 ..      72     145 ..      71     148 .. 0.95
   3 !    7.4   0.1    0.0042       3.6      16      45 ..     128     158 ..     113     162 .. 0.74

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 6.7e-07
   PF13424.1  7 ilnnla.lvlr.rlgdydeAlelyekalellrelgddhpdtaralnnlanlyla.lgdydeAleylekAle 74
                +++ ++ l+++  ++d d A++ y+ a+e       ++p++a a  nl+ l++  ++d d A++ +++A++
  MMETSP1325-20131115|7912_1  6 AHYHIGdLLHFsTQKDVDAAEAAYRMAIE-------ADPELAHAHVNLGLLLQNeRKDVDGAEAAYREAIK 69
                56777744555799999999999999995.......589***********999968899**********97 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 2.6e-07
   PF13424.1   2 pdlatilnnlalvlr.rlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                 p l +++nnl+ +l+ +  d++ A++ y+ a+e  +e  ++h+++  +l   +   ++ gd+++A +y+e+A  
  MMETSP1325-20131115|7912_1  72 PKLTQAHNNLGILLQtERYDLEGAEKAYRSAIETESEDTHAHLNLGIILWGRGPQAEEDGDLAAAARYFEEAAG 145
                 567899*****************************************************************976 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.0042
   PF13424.1  16 rrlgdydeAlelyekalel.lrelgddhpdt 45 
                 ++ gd+  A  ++e+a  l   ++g d  +t
  MMETSP1325-20131115|7912_1 128 EEDGDLAAAARYFEEAAGLwEVHFGADGEWT 158
                 6779999999999999999444678877665 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00037      0.32       2      31 ..       6      37 ..       5      38 .. 0.90
   2 !   13.7   0.0   6.9e-05     0.059       2      32 ..      42      73 ..      41      73 .. 0.92
   3 ?    0.9   0.0      0.86   7.3e+02      14      28 ..      90     104 ..      80     107 .. 0.73
   4 ?    4.3   0.0      0.07        60       2      25 ..     112     142 ..     111     144 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00037
                HHHHHH.HHHHH.HHHHHHHHHHHHHHHHH-T CS
   PF13174.1  2 Alykla.lsyyk.lgdtdeAlealerlikeyP 31
                A y+++ l+++  ++d d+A +a++  i+  P
  MMETSP1325-20131115|7912_1  6 AHYHIGdLLHFStQKDVDAAEAAYRMAIEADP 37
                7899**888889899*************9988 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 6.9e-05
                HHHHHHHHHHH.HHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  2 Alyklalsyyk.lgdtdeAlealerlikeyPd 32
                A  +l+l++++  +d d A +a+++ ik+ P+
  MMETSP1325-20131115|7912_1 42 AHVNLGLLLQNeRKDVDGAEAAYREAIKKDPK 73
                7789******8789***************996 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.86
                 HHHHHHHHHHHHHHH CS
   PF13174.1  14 gdtdeAlealerlik 28 
                  d + A +a++  i+
  MMETSP1325-20131115|7912_1  90 YDLEGAEKAYRSAIE 104
                 38889*****99987 PP

  == domain 4    score: 4.3 bits;  conditional E-value: 0.07
                 HHHHHHHHHHH.H......HHHHHHHHHHHH CS
   PF13174.1   2 Alyklalsyyk.l......gdtdeAlealer 25 
                 A ++l+ ++   +      gd ++A +++e+
  MMETSP1325-20131115|7912_1 112 AHLNLGIILWGrGpqaeedGDLAAAARYFEE 142
                 55666666664346666668*********98 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00078      0.67       2      32 ..       5      37 ..       4      38 .. 0.86
   2 !   15.0   0.0   1.6e-05     0.014       1      32 [.      40      72 ..      40      74 .. 0.94
   3 ?    5.0   0.0     0.026        22      10      29 ..      83     104 ..      75     109 .. 0.83
   4 ?   -1.9   0.0       3.9   3.3e+03       2      12 ..     111     121 ..     110     124 .. 0.81
   5 ?    2.6   0.1      0.15   1.2e+02      15      28 ..     131     144 ..     128     146 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00078
                --TTT---H.HHH.TT-HHHHHHHHH---HHHH CS
   PF13181.1  2 kayynlGdi.Yrq.lGdydkAkeylekalelkp 32
                +a+y +Gd+ +++  +d d+A+++++ a+e +p
  MMETSP1325-20131115|7912_1  5 PAHYHIGDLlHFStQKDVDAAEAAYRMAIEADP 37
                7899*****766668999********9999998 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 1.6e-05
                ---TTT---HHHH.TT-HHHHHHHHH---HHHH CS
   PF13181.1  1 akayynlGdiYrq.lGdydkAkeylekalelkp 32
                a+a+ nlG+++ +  +d d A++++++a++ +p
  MMETSP1325-20131115|7912_1 40 AHAHVNLGLLLQNeRKDVDGAEAAYREAIKKDP 72
                6899******9999****************998 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.026
                 HHHHTT-HHH..HHHHHH---H CS
   PF13181.1  10 iYrqlGdydk..Akeylekale 29 
                 i++q+ +yd+  A+++++ a+e
  MMETSP1325-20131115|7912_1  83 ILLQTERYDLegAEKAYRSAIE 104
                 677888998888********98 PP

  == domain 4    score: -1.9 bits;  conditional E-value: 3.9
                 --TTT---HHH CS
   PF13181.1   2 kayynlGdiYr 12 
                 +a++nlG i++
  MMETSP1325-20131115|7912_1 111 HAHLNLGIILW 121
                 7999**99876 PP

  == domain 5    score: 2.6 bits;  conditional E-value: 0.15
                 T-HHHHHHHHH--- CS
   PF13181.1  15 GdydkAkeylekal 28 
                 Gd  +A  y+e+a 
  MMETSP1325-20131115|7912_1 131 GDLAAAARYFEEAA 144
                 89999*******95 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.3    0.0023         2      14      33 ..      19      38 ..       4      39 .. 0.91
   2 !   16.7   0.1     5e-06    0.0043       1      33 [.      40      73 ..      40      74 .. 0.93
   3 ?    5.3   0.2     0.023        20       3      29 ..      77     104 ..      75     109 .. 0.79
   4 ?   -1.2   0.0       2.7   2.3e+03       3      14 ..     112     123 ..     111     124 .. 0.80
   5 ?    5.3   1.1     0.022        19      12      28 ..     128     144 ..     118     146 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0023
                TT-HHHHHHHHHHHHHH-TT CS
  PF07719.12 14 lgdyeeAleafekAleldPn 33
                ++d + A++a++ A+e dP+
  MMETSP1325-20131115|7912_1 19 QKDVDAAEAAYRMAIEADPE 38
                7999***************7 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 5e-06
                HHHHHHHHHHHHHTT-H.HHHHHHHHHHHHH-TT CS
  PF07719.12  1 aealynlGlayyklgdy.eeAleafekAleldPn 33
                a a+ nlGl++ + ++  + A++a+++A++ dP+
  MMETSP1325-20131115|7912_1 40 AHAHVNLGLLLQNERKDvDGAEAAYREAIKKDPK 73
                679999******999999***************7 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.023
                 HHHHHHHHHHHTT-H.HHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdy.eeAleafekAle 29 
                 a++nlG ++   +   e A++a++ A+e
  MMETSP1325-20131115|7912_1  77 AHNNLGILLQTERYDlEGAEKAYRSAIE 104
                 6777777777777777**********98 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 2.7
                 HHHHHHHHHHHT CS
  PF07719.12   3 alynlGlayykl 14 
                 a+ nlG +++ +
  MMETSP1325-20131115|7912_1 112 AHLNLGIILWGR 123
                 7999**999765 PP

  == domain 5    score: 5.3 bits;  conditional E-value: 0.022
                 HHTT-HHHHHHHHHHHH CS
  PF07719.12  12 yklgdyeeAleafekAl 28 
                 ++ gd++ A+++fe+A 
  MMETSP1325-20131115|7912_1 128 EEDGDLAAAARYFEEAA 144
                 5679***********95 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.2   6.8e-05     0.058      13      33 ..      18      38 ..       4      39 .. 0.89
   2 !   11.9   0.5   0.00014      0.12      12      33 ..      52      73 ..      40      74 .. 0.79
   3 ?    2.1   0.0      0.16   1.4e+02       2      12 ..      76      86 ..      75      89 .. 0.86
   4 ?    4.0   0.0     0.044        38      16      31 ..      91     106 ..      91     109 .. 0.83
   5 ?   -0.8   0.1       1.4   1.2e+03       3      12 ..     112     121 ..     112     124 .. 0.81
   6 ?    1.2   0.3      0.33   2.8e+02      15      27 ..     131     143 ..     128     146 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 6.8e-05
                HTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23 13 klgkydeAleyyekALelnPn 33
                 +++ d A+++y+ A+e +P+
  MMETSP1325-20131115|7912_1 18 TQKDVDAAEAAYRMAIEADPE 38
                699****************97 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00014
                HHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23 12 lklgkydeAleyyekALelnPn 33
                 + ++ d A+++y++A++ +P+
  MMETSP1325-20131115|7912_1 52 NERKDVDGAEAAYREAIKKDPK 73
                457999***************7 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.16
                HHHHHHHHHHH CS
  PF00515.23  2 kalynlGnayl 12
                +a++nlG +++
  MMETSP1325-20131115|7912_1 76 QAHNNLGILLQ 86
                69*****9875 PP

  == domain 4    score: 4.0 bits;  conditional E-value: 0.044
                 -HHHHHHHHHHHHHHH CS
  PF00515.23  16 kydeAleyyekALeln 31 
                 +++ A+++y+ A+e +
  MMETSP1325-20131115|7912_1  91 DLEGAEKAYRSAIETE 106
                 5788*********965 PP

  == domain 5    score: -0.8 bits;  conditional E-value: 1.4
                 HHHHHHHHHH CS
  PF00515.23   3 alynlGnayl 12 
                 a+ nlG ++ 
  MMETSP1325-20131115|7912_1 112 AHLNLGIILW 121
                 799***9975 PP

  == domain 6    score: 1.2 bits;  conditional E-value: 0.33
                 T-HHHHHHHHHHH CS
  PF00515.23  15 gkydeAleyyekA 27 
                 g++  A  y+e+A
  MMETSP1325-20131115|7912_1 131 GDLAAAARYFEEA 143
                 8999*******99 PP

>> PF12583.3  Tripeptidyl peptidase II N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.4    0.0087       7.4      90     116 ..      20      46 ..      15      54 .. 0.87
   2 !    9.0   0.1    0.0015       1.3      90     115 ..      55      80 ..      49      86 .. 0.89
   3 !    7.2   0.0    0.0056       4.8      88     116 ..      88     116 ..      83     119 .. 0.91
   4 ?    1.7   0.3      0.28   2.4e+02      19      61 ..     161     202 ..     153     210 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0087
   PF12583.3  90 ldlEnAEkiYkevvkahPkhlqAhLll 116
                  d++ AE+ Y+  ++a+P+  +Ah+ l
  MMETSP1325-20131115|7912_1  20 KDVDAAEAAYRMAIEADPELAHAHVNL 46 
                 58999*******************876 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0015
   PF12583.3  90 ldlEnAEkiYkevvkahPkhlqAhLl 115
                  d++ AE+ Y+e +k +Pk  qAh  
  MMETSP1325-20131115|7912_1  55 KDVDGAEAAYREAIKKDPKLTQAHNN 80 
                 68899*******************65 PP

  == domain 3    score: 7.2 bits;  conditional E-value: 0.0056
   PF12583.3  88 aKldlEnAEkiYkevvkahPkhlqAhLll 116
                  + dlE AEk Y+  ++ + +  +AhL l
  MMETSP1325-20131115|7912_1  88 ERYDLEGAEKAYRSAIETESEDTHAHLNL 116
                 5789**********************987 PP

  == domain 4    score: 1.7 bits;  conditional E-value: 0.28
   PF12583.3  19 avtanatkpkaaataqaatsvansaaGdgvttqtdgpaegsgs 61 
                 a  + a +pk++ + +  + ++++aaGd++++ + g+ ++ gs
  MMETSP1325-20131115|7912_1 161 AREEAAXHPKQQ-QGEGGSNAQEAAAGDSMKVVARGSENEDGS 202
                 556667777775.3445666788999**999998888777655 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.049        42       5      33 ..      10      38 ..       6      40 .. 0.77
   2 !    7.1   0.0    0.0053       4.6       1      32 [.      42      72 ..      42      74 .. 0.89
   3 ?    3.5   0.2     0.077        66       1      34 [.      77     111 ..      77     113 .. 0.75
   4 ?    4.9   0.1     0.029        24      11      29 ..     129     147 ..     126     159 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.049
   PF13176.1  5 Larl.ysr.lgdyekAielyeraLaltkdpl 33
                +++l +++ + d + A+ +y+   a++ dp+
  MMETSP1325-20131115|7912_1 10 IGDLlHFStQKDVDAAEAAYRM--AIEADPE 38
                56665666699***********..8888875 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0053
   PF13176.1  1 allnLarlysr.lgdyekAielyeraLaltkdp 32
                a++nL+ l ++ + d + A+ +y++  a++kdp
  MMETSP1325-20131115|7912_1 42 AHVNLGLLLQNeRKDVDGAEAAYRE--AIKKDP 72
                678999997777*************..*99998 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.077
   PF13176.1   1 allnLarl.ysrlgdyekAielyeraLaltkdpld 34 
                 a++nL+ l ++++ d e A+++y+ a++ ++++ +
  MMETSP1325-20131115|7912_1  77 AHNNLGILlQTERYDLEGAEKAYRSAIETESEDTH 111
                 577888884444779999*******8877777665 PP

  == domain 4    score: 4.9 bits;  conditional E-value: 0.029
   PF13176.1  11 rlgdyekAielyeraLalt 29 
                 ++gd   A++++e+a +l+
  MMETSP1325-20131115|7912_1 129 EDGDLAAAARYFEEAAGLW 147
                 6899999999999977665 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.44   3.8e+02      12      28 ..      16      32 ..      13      35 .. 0.79
   2 ?    6.3   0.2    0.0096       8.2       2      28 ..      40      67 ..      39      69 .. 0.84
   3 ?    2.7   0.1      0.14   1.2e+02       4      15 ..      77      88 ..      74     106 .. 0.69
   4 ?   -0.1   0.0         1   8.6e+02       7      16 ..     115     124 ..     111     129 .. 0.82
   5 ?    8.5   0.1    0.0019       1.7      15      39 ..     130     154 ..     126     155 .. 0.94

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.44
   PF13374.1 12 lrargryeeAlaleeea 28
                ++++++ ++A+a ++ a
  MMETSP1325-20131115|7912_1 16 FSTQKDVDAAEAAYRMA 32
                4667*******999866 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0096
   PF13374.1  2 aaalnnLAlalrar.gryeeAlaleeea 28
                a a  nL+l+l++  ++ + A+a ++ea
  MMETSP1325-20131115|7912_1 40 AHAHVNLGLLLQNErKDVDGAEAAYREA 67
                67888****777766***********98 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.14
   PF13374.1  4 alnnLAlalrar 15
                a nnL+++l++ 
  MMETSP1325-20131115|7912_1 77 AHNNLGILLQTE 88
                67*****88764 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 1
   PF13374.1   7 nLAlalrarg 16 
                 nL+++l+ rg
  MMETSP1325-20131115|7912_1 115 NLGIILWGRG 124
                 99*9999998 PP

  == domain 5    score: 8.5 bits;  conditional E-value: 0.0019
   PF13374.1  15 rgryeeAlaleeealairrrllGdd 39 
                  g++++A +++eea+ +++ ++G+d
  MMETSP1325-20131115|7912_1 130 DGDLAAAARYFEEAAGLWEVHFGAD 154
                 599********************98 PP

>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.25   2.1e+02       3      36 ..       6      34 ..       4      37 .. 0.53
   2 ?    2.1   0.0      0.35     3e+02       1      28 [.      40      68 ..      40      70 .. 0.63
   3 ?   -0.1   0.0       1.7   1.5e+03       2       9 ..      76      89 ..      75     104 .. 0.46
   4 ?   10.2   0.2     0.001      0.87       2      35 ..     111     144 ..     110     146 .. 0.69

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.25
   PF08238.7  3 AqynLGlyymylnGlgGvpkdpekAleWyekAAe 36
                A y  G  +   +    + kd + A+  y++A e
  MMETSP1325-20131115|7912_1  6 AHYHIGDLL---HFS--TQKDVDAAEAAYRMAIE 34
                566666333...222..45566666666666655 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.35
   PF08238.7  1 aeAqynLGlyymylnGl...gGvpkdpekAl 28
                a+A  nLG  ++++n +   +G ++ +++A+
  MMETSP1325-20131115|7912_1 40 AHAHVNLG--LLLQNERkdvDGAEAAYREAI 68
                679999**..655666655544555566665 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 1.7
   PF08238.7  2 eAqynLG......l 9 
                +A +nLG      +
  MMETSP1325-20131115|7912_1 76 QAHNNLGillqteR 89
                68899994322222 PP

  == domain 4    score: 10.2 bits;  conditional E-value: 0.001
   PF08238.7   2 eAqynLG..lyymylnGlgGvpk.....dpekAleWyekAA 35 
                 +A  nLG  l++   +G+    +     d++ A +++e AA
  MMETSP1325-20131115|7912_1 111 HAHLNLGiiLWG---RGP----QaeedgDLAAAARYFEEAA 144
                 58899**43333...555....2234457***********9 PP

>> PF02259.18  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   1.4    0.0023       1.9     247     298 ..      35      81 ..       6     192 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0023
  PF02259.18 247 etkllarcflklGewleklksnweqekkdeilkaystatefdpqwykawhsw 298
                  +++la ++  lG  l++      ++++d+++ ay++a++ dp++ +a++++
  MMETSP1325-20131115|7912_1  35 ADPELAHAHVNLGLLLQNE-----RKDVDGAEAAYREAIKKDPKLTQAHNNL 81 
                 3344555555555555554.....5666666666666666666666666655 PP

>> PF10373.4  Est1 DNA/RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00057      0.49       5      63 ..      29      95 ..      25     122 .. 0.48

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00057
   PF10373.4  5 YllAasllPssGnpyNQlaviatyagdeldavYyylRSlavrnpf.ptAreNLkllfek.......l 63
                Y++A++  P+  +++  l+++   +++++d     +R    + p  + A++NL +l++        +
  MMETSP1325-20131115|7912_1 29 YRMAIEADPELAHAHVNLGLLLQNERKDVDGAEAAYREAIKKDPKlTQAHNNLGILLQTerydlegA 95
                5555555555555555555555555555555555555555555555555555555555533222221 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.9    0.0026       2.2       7      61 ..      18      73 ..      14      86 .. 0.84
   2 ?    2.4   0.1      0.15   1.3e+02       7      47 ..      88     128 ..      81     146 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0026
   PF13371.1  7 reedferALavverllllaPddpyerRDrGllla.qlgclaaAaedLeaflelcpd 61
                 ++d+++A a++ + ++ +P+ ++ +   Glll+ ++ ++ +A ++++ +++++p 
  MMETSP1325-20131115|7912_1 18 TQKDVDAAEAAYRMAIEADPELAHAHVNLGLLLQnERKDVDGAEAAYREAIKKDPK 73
                589*****************************984577888888888888888874 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.15
   PF13371.1   7 reedferALavverllllaPddpyerRDrGlllaqlgclaa 47 
                 ++ d e A +++ + ++  ++d + +   G++l  +g  a+
  MMETSP1325-20131115|7912_1  88 ERYDLEGAEKAYRSAIETESEDTHAHLNLGIILWGRGPQAE 128
                 56678889999999999999999999999999866665444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.65
# Mc/sec: 785.27
//
Query:       MMETSP1325-20131115|7915_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.23u 0.41s 00:00:00.64 Elapsed: 00:00:00.46
# Mc/sec: 333.41
//
Query:       MMETSP1325-20131115|7916_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.42s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|7920_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.41s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 334.49
//
Query:       MMETSP1325-20131115|7918_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.8    7.8   5.3         13    5.1   2.4    2.2  2  PF06738.7 Protein of unknown function (DUF1212)


Domain annotation for each model (and alignments):
>> PF06738.7  Protein of unknown function (DUF1212)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0    0.0065        89     108     147 ..      50      88 ..      40      95 .. 0.69
   2 ?    5.1   2.4   0.00092        13     100     147 ..     116     166 ..     111     186 .. 0.74

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.0065
   PF06738.7 108 laaglacaafavlfggdwidvliaflagllggllrvvlak 147
                   + + ca fa+ ++g+ i ++ ++++  +  ++r++l  
  MMETSP1325-20131115|7918_1  50 TLIHVNCAVFAYGLSGNYILLVATAIL-NTWHIVRLWLRG 88 
                 567788**********98876666654.445566666555 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.00092
   PF06738.7 100 ryprwlvvlaaglacaafavlfg...gdwidvliaflagllggllrvvlak 147
                 +y +w  +l+ +  +aaf++ f+   g+w   l  +++++++g+l + + k
  MMETSP1325-20131115|7918_1 116 DYENWALALFGCWGSAAFVFAFNdmfGGWGHQLSHLIMAFFLGVLMHSADK 166
                 699******999999999999875557788888888888887777666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 943.87
//
Query:       MMETSP1325-20131115|7921_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   10.9   0.1        4.1    5.9   0.0    1.9  2  PF02383.13 SacI homology domain


Domain annotation for each model (and alignments):
>> PF02383.13  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0   0.00075        10     209     230 ..      19      40 ..      10      45 .. 0.82
   2 ?    5.9   0.0    0.0003       4.1     207     226 ..      42      61 ..      36      68 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.00075
                 EEEEEEEEE----S-S-----S CS
  PF02383.13 209 rifSfvqiRGSiPlfWeqasnl 230
                  ++++ q+R  iP  + q s++
  MMETSP1325-20131115|7921_1  19 LYLAYNQMRSTIPTQFGQLSAM 40 
                 5789**************6655 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0003
                 -EEEEEEEEEE----S-S-- CS
  PF02383.13 207 skrifSfvqiRGSiPlfWeq 226
                 ++ ++ fvq  GS+P    q
  MMETSP1325-20131115|7921_1  42 ANMVMNFVQFTGSVPTQLGQ 61 
                 688999*********97776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|7922_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|7923_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 666.81
//
Query:       MMETSP1325-20131115|7924_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 258.07
//
Query:       MMETSP1325-20131115|7914_1  [L=520]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-11   44.4   0.0    2.4e-11   43.6   0.0    1.4  1  PF00169.24 PH domain
  ------ inclusion threshold ------
      0.038   13.9   2.1      0.062   13.2   1.4    1.2  1  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.0   3.5e-15   2.4e-11       3      97 ..      36     127 ..      34     129 .. 0.94

  Alignments for each domain:
  == domain 1    score: 43.6 bits;  conditional E-value: 3.5e-15
                 BEEEEEEEE.TSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHH CS
  PF00169.24   3 keGyllkks.ellktwkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvq 97 
                 ++G+l+k++    +++k ryfvL +n L+y+ ++++   +++ g+i l+  + +  +++     +e+ +++++t+ ++++++l+a+see+r  Wvq
  MMETSP1325-20131115|7914_1  36 RAGFLVKQGqQNTSSRKSRYFVLDGNLLIYYAQEND--PASMVGVIYLERSSARAMPAKT--GSEERGFPLVLTTASSREIFLFADSEEDRDGWVQ 127
                 79*******999*********************996..*************999999974..389******************************9 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.4   9.1e-06     0.062      43      92 ..     173     222 ..     165     240 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 9.1e-06
   PF13094.1  43 ielLqeeirreeaelekdeekleeLeknakalererkeesknlhpvlqel 92 
                 +++L++e+++e a+le  + +l e+e++ ++ e+  ++  ++++ + +++
  MMETSP1325-20131115|7914_1 173 VAALEKELEKERASLEAKKLELLEMEERLRRSEERTRTGVEKARALVAQA 222
                 789*****************************999998888877776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       596  (0.0435927); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.36s 00:00:01.25 Elapsed: 00:00:00.57
# Mc/sec: 2148.46
//
Query:       MMETSP1325-20131115|7926_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|7927_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 414.37
//
Query:       MMETSP1325-20131115|7928_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-14   51.2   0.0    9.9e-14   50.9   0.0    1.0  1  PF00069.20 Protein kinase domain
     0.0035   16.3   0.0     0.0037   16.2   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.0   1.5e-17   9.9e-14     132     202 ..       7      72 ..       3      84 .. 0.87

  Alignments for each domain:
  == domain 1    score: 50.9 bits;  conditional E-value: 1.5e-17
                 ETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST CS
  PF00069.20 132 dkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge 202
                   k+++ ++D+G a+    +++++++   tr+Y+ PEv+  + +y++++D+Wsl++i++elltg+l+f+ +
  MMETSP1325-20131115|7928_1   7 R-KSRVVVVDLGNAC---WTHKHFSDDIQTRQYRCPEVII-GADYDTSADMWSLACIVFELLTGDLLFDPR 72 
                 3.77889*******7...6888999999************.***************************977 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   5.4e-07    0.0037     169     200 ..      33      64 ..       3      71 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 5.4e-07
                 GGGS-HHHHHHSEEEHHHHHHH---HHHHHHT CS
  PF07714.12 169 vkWmapEslkekkftsksDvWsfGvllwEift 200
                  ++  pE++    + + +D+Ws  ++++E++t
  MMETSP1325-20131115|7928_1  33 RQYRCPEVIIGADYDTSADMWSLACIVFELLT 64 
                 56889*************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 377.20
//
Query:       MMETSP1325-20131115|7929_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.052   12.3   0.0      0.052   12.3   0.0    1.1  1  PF10946.3 Protein of unknown function DUF2625


Domain annotation for each model (and alignments):
>> PF10946.3  Protein of unknown function DUF2625
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.8e-06     0.052      49      75 ..      40      66 ..      18      82 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.8e-06
   PF10946.3 49 splGavvyetGGilideGwlRilGsgn 75
                 p+Ga + e+GGi++d+G     G+g+
  MMETSP1325-20131115|7929_1 40 KPMGATIAEAGGIVFDDGSAWQYGAGQ 66
                58****************998888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 444.32
//
Query:       MMETSP1325-20131115|7931_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 316.12
//
Query:       MMETSP1325-20131115|7932_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   15.1   0.0      0.011   15.0   0.0    1.0  1  PF11085.3 Conserved membrane protein YqhR
      0.018   14.2   0.2      0.024   13.8   0.1    1.3  1  PF12534.3 Leucine-rich repeat containing protein 8


Domain annotation for each model (and alignments):
>> PF11085.3  Conserved membrane protein YqhR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   1.7e-06     0.011      78     131 ..      18      71 ..      10      77 .] 0.89

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.7e-06
   PF11085.3  78 glisigvallYyallkklkslwvgvlyGlvlwllvffvlnplfpdvksvtelkk 131
                 ++ ++++a+++ + ++ lk +w g++  l+ ++  f+vl +l+  ++ ++e + 
  MMETSP1325-20131115|7932_1  18 AVAALVCAIVFTVAFRELKPYWDGATDTLAYLCQWFIVLSTLALVLQGLAEEDD 71 
                 788999*********************************999999988887665 PP

>> PF12534.3  Leucine-rich repeat containing protein 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   3.5e-06     0.024      14      46 ..      29      64 ..      19      69 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.5e-06
   PF12534.3 14 qvayrllkPWwdvffd...YLvllmllvavlagtlq 46
                 va+r lkP wd  +d   YL+  +++++ la  lq
  MMETSP1325-20131115|7932_1 29 TVAFRELKPYWDGATDtlaYLCQWFIVLSTLALVLQ 64
                589***********9877788888998888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       571  (0.0417642); expected 273.4 (0.02)
Passed bias filter:                      485  (0.035474); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 361.80
//
Query:       MMETSP1325-20131115|7933_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.67
# Mc/sec: 404.16
//
Query:       MMETSP1325-20131115|7934_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   17.6   0.1      0.003   17.5   0.1    1.1  1  PF12756.2  C2H2 type zinc-finger (2 copies)
     0.0074   16.5   0.0     0.0074   16.4   0.0    1.1  1  PF00518.12 Early Protein (E6)
  ------ inclusion threshold ------
       0.11   12.1   0.4       0.13   11.8   0.3    1.1  1  PF02945.10 Recombination endonuclease VII
       0.12   11.2   0.4       0.14   11.0   0.3    1.1  1  PF03918.9  Cytochrome C biogenesis protein


Domain annotation for each model (and alignments):
>> PF12756.2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   8.8e-07     0.003      45      78 ..      28      61 ..       8      63 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 8.8e-07
   PF12756.2 45 ekieekleClyCekefkslealreHmkkkgHcki 78
                +  +++++C++C+k+   +e+  +H k  gH+++
  MMETSP1325-20131115|7934_1 28 NLATDTIRCMTCQKTMAGQEEAVAHAKATGHTNF 61
                4445579********99**************976 PP

>> PF00518.12  Early Protein (E6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.2e-06    0.0074      60      88 ..      22      50 ..       4      62 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 2.2e-06
  PF00518.12 60 eeetkksllelliRCliClklLsleEKlr 88
                 +++ ++l + +iRC++C+k++  +E   
  MMETSP1325-20131115|7934_1 22 SARQYTNLATDTIRCMTCQKTMAGQEEAV 50
                34455689999**********99888654 PP

>> PF02945.10  Recombination endonuclease VII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   3.8e-05      0.13      11      50 ..      22      58 ..      11      61 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.8e-05
                .HHHHHHHHHHT----TTT-.S---SGGGSB--B------ CS
  PF02945.10 11 tkeerkalleaqggkCaiCqerekektkalavDHdHktgk 50
                +++++ +l+  +  +C++Cq+  +   ++ av H  +tg+
  MMETSP1325-20131115|7934_1 22 SARQYTNLA-TDTIRCMTCQK--TMAGQEEAVAHAKATGH 58
                355555443.45669*****8..44457888999999997 PP

>> PF03918.9  Cytochrome C biogenesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3     4e-05      0.14      19      48 ..      11      41 ..       3      52 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 4e-05
   PF03918.9 19 aaidevefdpaqearareLa.keLRCpvCqn 48
                +++ +v+ +++   ++++La  ++RC+ Cq 
  MMETSP1325-20131115|7934_1 11 QKALKVAREAQSARQYTNLAtDTIRCMTCQK 41
                334445556777888999962689*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       821  (0.0600497); expected 273.4 (0.02)
Passed bias filter:                      682  (0.049883); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|7935_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.15   11.6   2.5       0.19   11.2   1.2    1.5  1  PF01182.15 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
       0.59   10.6   4.2        6.5    7.2   0.4    2.2  2  PF13145.1  PPIC-type PPIASE domain


Domain annotation for each model (and alignments):
>> PF01182.15  Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.2   2.8e-05      0.19      48     116 ..     132     201 ..      95     208 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 2.8e-05
                 S-GGGEEEEESEEESS-TTSTT-HHHHHHHHTGGG-EE-CC.CC-........HHHHHHHHHHHHHCCHT CS
  PF01182.15  48 idwsrvhvflgDERfVpaddpdsneklareaLlskvkipea.nvhrmpaesddpeeaaaayeeelrallg 116
                 i    +++ +  ER++++++ +   +l+r+a++ +++ p +    + +ae++++ee a+a+e+el+  + 
  MMETSP1325-20131115|7935_1 132 ITVTALEWGWEQERYLQDEQFEHALGLLRHAIFPEIEPPLDeAAAAAAAEAAAMEEMAEAMENELEVEVD 201
                 666788999***************************7666523334446778999999999999986665 PP

>> PF13145.1  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.4   0.00095       6.5      37      92 ..      64     119 ..      50     126 .. 0.89
   2 ?    4.7   0.1    0.0059        40      36      69 ..     173     206 ..     145     222 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00095
   PF13145.1  37 eaalaaakakagedfaalakgnsedakdlgisesesdlpeelaealfalkpgevsg 92 
                 e ++ ++kaka ++++ la++ + +  +++ + s+s+  e+la++ + l+++ +s+
  MMETSP1325-20131115|7935_1  64 EKEMGELKAKALQQLEGLATNLKVNGISKASFLSKSKTAEQLAKWQARLEEQPWSE 119
                 5567789999999************9999999999999*************99996 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0059
   PF13145.1  36 aeaalaaakakagedfaalakgnsedakdlgise 69 
                  +aa+aaa+a+a e++a++ +++ e + d++++e
  MMETSP1325-20131115|7935_1 173 EAAAAAAAEAAAMEEMAEAMENELEVEVDPALEE 206
                 2334444555566889999998888888877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       797  (0.0582943); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.40s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1119.93
//
Query:       MMETSP1325-20131115|7938_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|7939_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 340.53
//
Query:       MMETSP1325-20131115|7937_1  [L=297]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-38  130.6   0.0    9.1e-38  130.2   0.0    1.1  1  PF00233.14 3'5'-cyclic nucleotide phosphodiesterase
  ------ inclusion threshold ------
      0.018   14.9   0.1        2.1    8.3   0.0    3.0  3  PF05440.7  Tetrahydromethanopterin S-methyltransferase subunit B


Domain annotation for each model (and alignments):
>> PF00233.14  3'5'-cyclic nucleotide phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.2   0.0   1.3e-41   9.1e-38       1     221 [.       2     260 ..       2     272 .. 0.82

  Alignments for each domain:
  == domain 1    score: 130.2 bits;  conditional E-value: 1.3e-41
  PF00233.14   1 yHNliHaadVtqtvflllktlalervltd....levlalviaaliHDvdHrGttNsfqvqs....kselallyndeSvLEnhHlalaikllqdeelnilqnlskkdfeelldlvieiilaTDlslhlkklkrlkkmveqkkv............................ldlddkikvlsllltaaDlSnvtkplkvskriaelimeEFfeqgdlE.relglkpspm..cdreka..eveksqvgfideivepvfklladv 221
                 yHN +H+a V +++f l++ ++l+  l d       ++lv+a l+HDv+H+G+t  f+++       +la+ ynd+S LEn Hla++++l++ +  n +  ls+++   +++ +i ++l TD+++h +++++l   +++ +                             +++ + + v+++ l+a+D+S v  p++  +++ ++++eEF+ qgd+E +e g+ +sp    dr+    +     + f++  + p+f+ l ++
  MMETSP1325-20131115|7937_1   2 YHNALHGATVGRSIFALCQDPTLTGRLGDnlskEMQFTLVLAGLVHDVNHPGVTATFLLHPgthdTMDLAIKYNDQSPLENMHLAVTFELMR-KAKNAF--LSTEQVGIIRSALIRAVLGTDMAKHAEMITKLDALIDNLEHdeeltrsswywpatppgilktdkqrqawVHKLQEEFVMEVFLHACDISTVGMPFDQFRKWNKRVTEEFWLQGDKEvKEFGVLISPAagFDRNAKgeSRHGFTLFFMERLALPLFEKLDKL 260
                 9******************99998766442111346899*******************9875565779************************.566777..6889999******************************9998999***************888776666533337899***************************************445566655541156654322233344556666677777766655 PP

>> PF05440.7  Tetrahydromethanopterin S-methyltransferase subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.048   3.3e+02      76      92 ..       2      18 ..       1      20 [. 0.90
   2 ?    8.3   0.0   0.00031       2.1      15      52 ..     103     141 ..      91     155 .. 0.80
   3 ?    1.2   0.0     0.048   3.3e+02      34      48 ..     252     266 ..     245     278 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.048
   PF05440.7 76 ltnafyGfviGlaivaL 92
                ++na++G  +G  i aL
  MMETSP1325-20131115|7937_1  2 YHNALHGATVGRSIFAL 18
                89************988 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00031
   PF05440.7  15 aetgvvaeel.edvilldvepieekvekLealvddllns 52 
                  + g++  +l + v+  d+ +  e + kL+al+d+l++ 
  MMETSP1325-20131115|7937_1 103 EQVGIIRSALiRAVLGTDMAKHAEMITKLDALIDNLEHD 141
                 4567777766699999*******************9986 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.048
   PF05440.7  34 pieekvekLealvdd 48 
                 p++ek++kL ++ d+
  MMETSP1325-20131115|7937_1 252 PLFEKLDKLSQIEDE 266
                 89*********9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.39s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 1423.44
//
Query:       MMETSP1325-20131115|7940_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   14.1   0.1      0.036   13.8   0.1    1.1  1  PF02369.11 Bacterial Ig-like domain (group 1)


Domain annotation for each model (and alignments):
>> PF02369.11  Bacterial Ig-like domain (group 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   2.6e-06     0.036      57      92 ..       4      39 ..       1      47 [. 0.79

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2.6e-06
  PF02369.11 57 nkntkatTdanGkatvtltstkaGkatVtaslegga 92
                +++ + t+ a G+at+t+ + +a  + V+a l++g+
  MMETSP1325-20131115|7940_1  4 MTSDERTDTATGIATATVNGDRAQYDRVEAXLTEGM 39
                55446777899*********************9554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 397.80
//
Query:       MMETSP1325-20131115|7942_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.33s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 1121.70
//
Query:       MMETSP1325-20131115|7944_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.6    5.3   6.9        8.5    4.9   4.8    1.1  1  PF04684.8 BAF1 / ABF1 chromatin reorganising factor


Domain annotation for each model (and alignments):
>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   4.8   0.00062       8.5     128     157 ..     170     199 ..     143     205 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.00062
   PF04684.8 128 dvaedeaqdddedddaavtaaiaaavaava 157
                 + a+de++ddde+d aa +aa aaa+ a a
  MMETSP1325-20131115|7944_1 170 QDAKDETRDDDEEDLAAAAAAGAAALGAGA 199
                 4578999******************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       566  (0.0413985); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.54
# Mc/sec: 1065.05
//
Query:       MMETSP1325-20131115|7945_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0042   16.6   0.3      0.006   16.1   0.2    1.4  1  PF13740.1 ACT domain


Domain annotation for each model (and alignments):
>> PF13740.1  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.2   4.4e-07     0.006      34      71 ..      18      55 ..       5      60 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 4.4e-07
   PF13740.1 34 rqavihgrltLgmlvsgpeeaierlekaLlflaqelgl 71
                r+ ++hg+l L + v ++++ ++++ekaL  l ++l l
  MMETSP1325-20131115|7945_1 18 RLRHLHGHLRLEVHVGAEWNVVAAVEKALADLDARLRL 55
                67899************************988766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 401.02
//
Query:       MMETSP1325-20131115|7943_1  [L=350]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-19   70.5   2.6    1.4e-19   70.5   1.8    2.1  2  PF00106.20 short chain dehydrogenase
      7e-16   58.6   0.0    1.1e-15   57.9   0.0    1.3  1  PF13561.1  Enoyl-(Acyl carrier protein) reductase
    1.4e-08   34.4   0.9      2e-08   33.9   0.2    1.6  2  PF08659.5  KR domain
    6.9e-06   25.5   0.0    1.2e-05   24.7   0.0    1.3  1  PF01370.16 NAD dependent epimerase/dehydratase family
    1.6e-05   24.9   0.6    5.8e-05   23.0   0.4    2.1  1  PF13460.1  NADH(P)-binding
  ------ inclusion threshold ------
      0.012   14.8   0.1       0.02   14.0   0.0    1.5  1  PF05368.8  NmrA-like family
       0.04   12.7   0.1      0.059   12.1   0.0    1.3  1  PF04321.12 RmlD substrate binding domain
      0.046   13.1   0.2       0.15   11.5   0.0    2.0  2  PF00107.21 Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       5.4   9.2e+03      23      34 ..      20      31 ..       7      49 .. 0.49
   2 !   70.5   1.8     8e-23   1.4e-19       1     140 [.      83     221 ..      83     262 .. 0.80

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 5.4
                HSSEEEEEEESS CS
  PF00106.20 23 egarhlvlvsrr 34
                + a+h++ ++ r
  MMETSP1325-20131115|7943_1 20 RAAAHVAPAAAR 31
                333333333333 PP

  == domain 2    score: 70.5 bits;  conditional E-value: 8e-23
                 -EEEE---------HHHHHHHHHSSEEEEEEESS.SHHHHHHHHHHHHH---EEEEEE--TTSHHHHHHHHHHHHHH----SEEEEE---TT.-TTCCSC....HHHHHHHHHHHTHHHHHHHHHHHH....HH---EEEEEECHHHH CS
  PF00106.20   1 gtvliTGGlgglGlalArwLveegarhlvlvsrredapgaaeliaelealgaevtvvacDvadrdalaallaeirkalgpldgvvhnagvld.dgpleel...tperlervlapkvtgawllheltld....adlgafvlfSSvagvl 140
                 +tvl+TG ++glGl+ +++Lve+ga +++ +  +   ++a +l    +a ga  +v ++D +++++++all ++++++ +ld++++nag++  + p++ +   +++++ +v+ ++v g + ++  +l+    ++++++v+ SS  g +
  MMETSP1325-20131115|7943_1  83 QTVLVTGSSRGLGLEFVKQLVEQGATVIATCR-S--PDRAPAL----QAIGA--RVEKLDTTNEASIDALLGKLQAEGVTLDVLINNAGISSkNHPVDPIvdaDEADVLNVFSTNVLGNIRMTNKCLPlmakSSKKVVVNLSSDLGSI 221
                 59*********************886666666.5..2444444....45556..6669********************************88666666555559************************99765599999999965544 PP

>> PF13561.1  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   6.5e-19   1.1e-15       5     192 ..      91     282 ..      88     312 .. 0.88

  Alignments for each domain:
  == domain 1    score: 57.9 bits;  conditional E-value: 6.5e-19
                 ------HHHHHHHH---EEEE---HH----------------------TT-SGGHHHHHHHHHHH.---BSEEEEEEE---T..TTS-GGG------HHHHHHHTHHHHHHHHHHGG..GB---............--EEEEEE-----------.--------THHHHHHHHHH----S---EEEEEE------------ CS
   PF13561.1   5 dnsigwaiakalaeaGaevilttwvpaklkkkvqelakelpadvvplDvtseedvselaekvkedlggkiDilvhsianspeervekplletsrkgllaalsisayslvsllkaalpknlmneg............gSivalsylaservipgyg.gmsvaKAaLEsltRvlAvelgrkkgiRvntisaGplktraakaig 192
                 ++++g+++ k l e+Ga+vi t ++p +     +   + ++a+v  lD t+e++++ l+ k++++   ++D+l++ +++s +++   p++++++ ++l+ +s++++  +++++ +lp  lm++             gSi ++    s +v pg    + ++KAa     Rv+A el+  +g  v + s G+++t  ++  g
  MMETSP1325-20131115|7943_1  91 SRGLGLEFVKQLVEQGATVIATCRSPDR-----APALQAIGARVEKLDTTNEASIDALLGKLQAEG-VTLDVLINNAGISSKNHPVDPIVDADEADVLNVFSTNVLGNIRMTNKCLP--LMAKSskkvvvnlssdlGSIHGTFTAQSAKVKPGGVcSYRISKAAGNMASRVFAAELQS-EGAIVIAMSPGWVETDMGSSGG 282
                 689***********************98.....4555668999**********************7.**************************************************..6665556888888888888888877888999898888*********************9.888899********99887655 PP

>> PF08659.5  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.2   1.2e-11     2e-08       2     136 ..      84     216 ..      83     232 .. 0.80
   2 ?   -3.6   0.0       3.9   6.6e+03     150     169 ..     245     264 ..     241     272 .. 0.58

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 1.2e-11
                 -EEE----SHHHHHHHHHHHH-----EEEEE--.---------HHHHHH----EEEEE--TTSHHHHHHHH----TTS.---EEEE--------....-TTT--HHHHHHHHHHHHHHHHHHHHHHCC....----EEEEEEE CS
   PF08659.5   2 tyLvtGGlgglGlelarwLaergarhlvllsrsaapdeeaeallaelealgaevtvvaaDvadrdavealleeveaeepplrGvvhaAgvlrda....llaemtaedlaavlapKvtGawnLhellad....epldffvlfSS 136
                 t+LvtG   glGle++++L+e+ga+ ++ + rs  pd++      +l+a ga+v+  ++D ++++++ all +++ae+ +l+  ++ Ag+ +++    ++ + +++d+ +v+++ v G   + + +      ++ +++v +SS
  MMETSP1325-20131115|7943_1  84 TVLVTGSSRGLGLEFVKQLVEQGAT-VIATCRS--PDRA-----PALQAIGARVE--KLDTTNEASIDALLGKLQAEGVTLDVLINNAGISSKNhpvdPIVDADEADVLNVFSTNVLGNIRMTNKCLPlmakSSKKVVVNLSS 216
                 79********************986.5666777..4444.....55999999986..89********************************986555589999***********99998887765443333356666666666 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 3.9
                 ----HHHHHH---------E CS
   PF08659.5 150 aaanaflDalaehrraqglp 169
                 aa+n     +a+  +++g+ 
  MMETSP1325-20131115|7943_1 245 AAGNMASRVFAAELQSEGAI 264
                 56666666666666666544 PP

>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   6.9e-09   1.2e-05       1     166 [.      85     266 ..      85     270 .. 0.70

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 6.9e-09
                 EEEE--------HHHHHHHHH-TEEEEESSCSTCCCCCCHHHTBEEEB--TT-HHHHHHHHHHH.....T.SEEEE--S---....HHHCC.CSHHH...HHHHHT---HHHHHHHH....HHTT.EEEEEEEGGG---BSSSCB-TTS----SSH..HHHHHHHHHHHHHHHHHHHT-EEEEEE CS
  PF01370.16   1 ilVtGatGfiGsalveallekgyevvnlirrtrseslatvrirvelveldltdkdalerlfaee.....qpdaVihlAaesg....vdass.edpad...fieanvegtlnlleaar....kagvkrflfasSsevygkdaeqpikEetplgplsp..YaaaKlageklveayaeeyglnaiilr 166
                 +lVtG +  +G  +v++l e+g +v++ +r+++++ +a + i +++++ld t+++++++l+ +        d+ i+ A+ s     vd  +  d+ad   ++ +nv g+ ++ + +     k   k ++++sS+ +   + ++    ++ ++p     Y ++K+ag    + +a+e + +  i++
  MMETSP1325-20131115|7943_1  85 VLVTGSSRGLGLEFVKQLVEQGATVIATCRSPDRA-PALQAIGARVEKLDTTNEASIDALLGKLqaegvTLDVLINNAGISSknhpVDPIVdADEADvlnVFSTNVLGNIRMTNKCLplmaKSSKKVVVNLSSD-LGSIH-GTFTAQSAKVKPGGVcsYRISKAAGNMASRVFAAELQSEGAIVI 266
                 79**********************99999999988.555558999***************99887777789999*****9863213333333333331114455666666665555555534444666666663.33333.33333344444444466***********9999999888888776 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.4   3.4e-08   5.8e-05       1      60 [.      85     146 ..      85     283 .. 0.71

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 3.4e-08
   PF13460.1   1 IaviGAtGktGrrivkellarghevtalvRnpsklpe..ssgvtivkkDlfdledlaealag 60 
                 ++v+G +   G + vk+l+++g +v a+ R+p+++p+  + g+++ k+D +++++++++l  
  MMETSP1325-20131115|7943_1  85 VLVTGSSRGLGLEFVKQLVEQGATVIATCRSPDRAPAlqAIGARVEKLDTTNEASIDALLGK 146
                 79***********************************9888999999******999999874 PP

>> PF05368.8  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.2e-05      0.02       1      64 [.      85     146 ..      85     216 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.2e-05
                 EEESS----HHHHHHHHHHH---EEEEE-S-----HHHHHHHSTTEEE---TT-HHHHHHHH-- CS
   PF05368.8   1 ilviGaTGrqGksvvraslkaghkvralvRdlkselakslkaaGvelvegdlddkeslvealkg 64 
                 +lv+G++  +G  +v+ ++++g +v a  R ++   a +l+a G+ + + d+ +++s++++l +
  MMETSP1325-20131115|7943_1  85 VLVTGSSRGLGLEFVKQLVEQGATVIATCRSPD--RAPALQAIGARVEKLDTTNEASIDALLGK 146
                 7999***9**********************996..5788*******************999865 PP

>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.5e-05     0.059       2      53 ..      84     150 ..      83     218 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.5e-05
                 EEEEE--------HHHHHH----EEEEE--TT...............T--TT-HHHHHHHHHHH--S CS
  PF04321.12   2 rilvtGanGqlGteLaralkeegvevvaldre...............eldltdpeavaalvkeakpd 53 
                 ++lvtG++  lG e +++l e+g++v+a+ r+               +ld t++++++al+ + + +
  MMETSP1325-20131115|7943_1  84 TVLVTGSSRGLGLEFVKQLVEQGATVIATCRSpdrapalqaigarveKLDTTNEASIDALLGKLQAE 150
                 69***************************88889*************************99665543 PP

>> PF00107.21  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.7e-05      0.15       1      36 [.      93     128 ..      93     165 .. 0.68
   2 ?   -3.4   0.0       3.4   5.8e+03      66      92 ..     190     216 ..     186     229 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8.7e-05
                 ----HHHHHHHHH--EEEEEESSHHHHHHHHH---- CS
  PF00107.21   1 GvGlaavqlAkalGarviavdsseeklelakelGad 36 
                 G+Gl  v+ +   Ga+via+++s++++  ++++Ga 
  MMETSP1325-20131115|7943_1  93 GLGLEFVKQLVEQGATVIATCRSPDRAPALQAIGAR 128
                 66777777778899********************64 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 3.4
                 T-.CTHHHHHHHCB-----EEEC---- CS
  PF00107.21  66 vgagatfeqalkllapgGrvvvvggts 92 
                  g+ ++ + +l l+a+  + vvv + s
  MMETSP1325-20131115|7943_1 190 LGNIRMTNKCLPLMAKSSKKVVVNLSS 216
                 566667777777777777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.53
# Mc/sec: 1582.50
//
Query:       MMETSP1325-20131115|7941_1  [L=592]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-05   24.4  27.6    0.00085   18.8   5.1    3.4  3  PF01554.13 MatE


Domain annotation for each model (and alignments):
>> PF01554.13  MatE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   5.1   6.2e-08   0.00085       6     162 .]      94     258 ..      89     258 .. 0.90
   2 !    3.1   0.9    0.0042        58      15      49 ..     332     367 ..     322     375 .. 0.78
   3 !   13.6   2.6   2.5e-06     0.034      68     147 ..     399     478 ..     396     496 .. 0.90

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 6.2e-08
  PF01554.13   6 qllqvlsslidtlvvgrl.gasalaavsialsilsfifipllglgtalsilvgqalGagnperakvsvrvtvilsllisvviaili.llfredilslftedee.......vlklaakylrililgipllslqlvlsgvlrgagdtkpplyinlislyllniplnyl 162
                  l + l+slidt  vg++ +  +la+++ a+ +    ++++  l++ ++ l+++ +  gn e+  + ++ +++ s +++  ++++i   +  ++++ f            +l+ a  y+ + ++g+++ +l   l++ + +  ++++pl++  is+ ++n++ +yl
  MMETSP1325-20131115|7941_1  94 WLSNPLLSLIDTAAVGKVsSVLELASLGPATAVCDTGGYVFSFLSVVTTGLIANSVARGNQEASDRHLNDALVASAICGAGMTAAIlAPTGVPLMKAFLGGSSmtaasasLLPGAMGYATVRAVGFIPTLLAAQLQSSFLARRNVRLPLIAVGISS-VVNLFGDYL 258
                 5667799***********9999******************************************************9998776555056778888888777766777888999999999*************************************.****99997 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.0042
  PF01554.13  15 idtlvvgrl.gasalaavsialsilsfifipllglg 49 
                 +++  +++  g++a+aa++i  s+++++   + +++
  MMETSP1325-20131115|7941_1 332 VSMAAAASTcGTVAVAAHQILYSVFALFCPMGEAIS 367
                 4555555555***************99876666655 PP

  == domain 3    score: 13.6 bits;  conditional E-value: 2.5e-06
  PF01554.13  68 akvsvrvtvilsllisvviailillfredilslftedeevlklaakylrililgipllslqlvlsgvlrgagdtkpplyi 147
                 a+  v  +  ++l+++ + ai+ ++++ ++ +lft++ +v+++  + ++++++++ l +l  +l gvl ++gd+k+  ++
  MMETSP1325-20131115|7941_1 399 ARSLVAAMAGVALVLGGIDAIAAMALPMFLPHLFTSSSAVAQALFQTAPFMAVTLTLHALASMLEGVLFATGDAKFLGVV 478
                 667777888899*************************************************************9986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (592 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.38s 00:00:01.25 Elapsed: 00:00:00.56
# Mc/sec: 2488.85
//
Query:       MMETSP1325-20131115|7947_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|7951_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-05   22.0   4.1    0.00023   20.8   2.8    1.7  1  PF00397.21 WW domain
  ------ inclusion threshold ------
      0.027   13.5   5.2      0.029   13.4   3.6    1.2  1  PF01056.13 Myc amino-terminal region
      0.054   12.8   4.3       0.07   12.5   3.0    1.3  1  PF03066.10 Nucleoplasmin
       0.16   11.2   3.1        0.2   10.9   2.1    1.2  1  PF06553.7  BNIP3
       0.25   10.7   5.9       0.29   10.6   4.1    1.3  1  PF04546.8  Sigma-70, non-essential region
        6.7    7.0  26.4         16    5.8  18.3    1.8  1  PF00428.14 60s Acidic ribosomal protein
          7    6.3  16.7        7.9    6.1  11.5    1.1  1  PF01034.15 Syndecan domain
        8.4    5.4   7.0         11    5.1   4.9    1.1  1  PF03824.11 High-affinity nickel-transport protein


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   2.8   1.4e-07   0.00023       5      31 .]     116     142 ..     113     142 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 1.4e-07
                 EEE.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21   5 Weersddd.dGrvYYyNheTgetqWekP 31 
                 W++ ++ + + r+YY+N+e+g++ W+ P
  MMETSP1325-20131115|7951_1 116 WVQGWS-EdHKRHYYFNKESGQSLWTAP 142
                 998895.448***************988 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.6   1.7e-05     0.029     197     244 ..      65     112 ..       1     137 [. 0.46

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.7e-05
  PF01056.13 197 seksakvaaptpelvlrtspnsssssgedseseeeeeeeeeeeeeeei 244
                  ++++++  +t++ + +++++++  ++e+se+e e+eeeeee +ee +
  MMETSP1325-20131115|7951_1  65 HHAEHPAHDTTHTGGATAAAAAAKEEEEESEEELESEEEEEESDEETV 112
                 122222222233333333333444444445544445554444444443 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   3.0   4.1e-05      0.07     117     140 ..      74     110 ..      23     118 .. 0.59

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.1e-05
                 ..............----XXXXXXXXXXXXXXXXXXX CS
  PF03066.10 117 e.............eddeedeeeeddeedddeeeeee 140
                               +++ee++eee + e+++ee +ee
  MMETSP1325-20131115|7951_1  74 TthtggataaaaaaKEEEEESEEELESEEEEEESDEE 110
                 0555555555555444444455555544444444433 PP

>> PF06553.7  BNIP3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.1   0.00012       0.2      71     130 ..      66     122 ..      37     127 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00012
   PF06553.7  71 scdsPrrsrkppqeegqieldveeeeerd...vsieseeeakekekeeeilkkntdwvwdWSs 130
                 +++ P  ++   ++ g++ +++  +ee++    ++eseee++e     +  +  t wv+ WS 
  MMETSP1325-20131115|7951_1  66 HAEHP--AHDTTHTGGATAAAAAAKEEEEeseEELESEEEEEES----DEETVYTKWVQGWSE 122
                 44555..4444445555554444333333000345555554444....4456899******96 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.1   0.00017      0.29      46      84 ..      80     116 ..      28     137 .. 0.63

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00017
   PF04546.8  46 eddeeeeeddddddededeeeeseeadegpdpeearerF 84 
                 + ++++++  ++++e+++ee esee++e+ d e +  ++
  MMETSP1325-20131115|7951_1  80 ATAAAAAA--KEEEEESEEELESEEEEEESDEETVYTKW 116
                 22222222..23333333333566666666666666555 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  18.3    0.0096        16      47      82 ..      70     110 ..       5     112 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0096
  PF00428.14  47 a.....aaaaaaaaaaaaaaaaaaaeeekkeeeeeEeeddd 82 
                         ++a+aaaaaa++++++ eee + eeeeEe+d++
  MMETSP1325-20131115|7951_1  70 PahdttHTGGATAAAAAAKEEEEESEEELESEEEEEESDEE 110
                 04455556677888888888888888887777777888875 PP

>> PF01034.15  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  11.5    0.0046       7.9      92     228 ..       7     110 ..       1     154 [. 0.30

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0046
  PF01034.15  92 ttaststktsstvsttttattsPsetateeatttvatetatevq......saaepeqpttpatdedldtevetseddstptdedeeddeedpeddnkpetteketeelsttlpevvesgevelattneadnevpasdgssddt 228
                 tta t+t ts +  +                            +        + ++ +tt a ++  + + ++++++++p++   +++ e+p++d+++  + ++++     ++e +         ++e++ e ++++++sd++
  MMETSP1325-20131115|7951_1   7 TTAATTTTTSGASLA----------------------------PasgqvlALTDKAADTTDADAHMAAPHLSSHHHVHDPNKPHTHHHAEHPAHDTTHTGGATAAAA---AAKEEE--------EESEEELESEEEEEESDEE 110
                 222222222222211............................1222222222222222222222222222222222222222222222222222222222222211...111111........1111111111111112211 PP

>> PF03824.11  High-affinity nickel-transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   4.9    0.0062        11     110     162 ..      32      85 ..      12      95 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0062
  PF03824.11 110 rgrapaadleaalakrgllsrilgk.....lfrlvtkhwhmypvgflfGlGfdcatev 162
                  ++a+++d +a++a ++l s+ + +     +++++ +h  +++++    +G  +a+ +
  MMETSP1325-20131115|7951_1  32 DKAADTTDADAHMAAPHLSSHHHVHdpnkpHTHHHAEHPAHDTTH----TGGATAAAA 85 
                 456666777777777766655543322333666666666666666....565555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1450  (0.106056); expected 273.4 (0.02)
Passed bias filter:                      757  (0.0553686); expected 273.4 (0.02)
Passed Vit filter:                       117  (0.00855764); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.59u 0.44s 00:00:01.03 Elapsed: 00:00:00.50
# Mc/sec: 752.46
//
Query:       MMETSP1325-20131115|7950_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-13   48.2   3.7    2.6e-10   39.6   2.6    2.1  1  PF00648.16 Calpain family cysteine protease
  ------ inclusion threshold ------
       0.25   11.6   1.5       0.43   10.9   1.0    1.6  1  PF13539.1  D-alanyl-D-alanine carboxypeptidase


Domain annotation for each model (and alignments):
>> PF00648.16  Calpain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   2.6   3.8e-14   2.6e-10     209     292 ..      44     154 ..      17     156 .] 0.68

  Alignments for each domain:
  == domain 1    score: 39.6 bits;  conditional E-value: 3.8e-14
                 TS-BSS---EE---EEEEB......---EEEEEEEE------------STTSGGGGG...S-H...........HHHH.......HHTTSS-.---EEEEHHHHHHH-CEE CS
  PF00648.16 209 kglvkghaysvtgvkevel......kgekvklirlrnPWGeveWkGaWsdesseWse...vde...........eeka.......elqlkveedGefWmsfedflrefsrl 292
                  g++ ghay ++++ ev+            k++rlrn WG   W GaWs e ++W e   ++e           e k+       el++ ++ + efWm ++df+r+f+++
  MMETSP1325-20131115|7950_1  44 SGILAGHAYIILDLVEVHAdatadfDAVDLKMVRLRNTWGIGRWGGAWSQEDRKWIEypeIKEklaplatkwksEVKEevggddrELETLQKGEDEFWMDWRDFIRHFTCI 154
                 68899*********99987444443556789*******************9999965111322111111111111222111111134444555779*************98 PP

>> PF13539.1  D-alanyl-D-alanine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.0   6.2e-05      0.43      40      63 ..      73      97 ..      21     101 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 6.2e-05
   PF13539.1 40 eelvaifekrgf.eWGgdWrpkDym 63
                 ++v++ + +g+ +WGg+W+ +D  
  MMETSP1325-20131115|7950_1 73 LKMVRLRNTWGIgRWGGAWSQEDRK 97
                468899999**********977876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 593.38
//
Query:       MMETSP1325-20131115|7946_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-25   89.3   0.0    1.2e-14   53.6   0.0    2.1  2  PF03982.8 Diacylglycerol acyltransferase
  ------ inclusion threshold ------
        6.7    5.7   6.5        9.8    5.2   4.5    1.1  1  PF07420.6 Protein of unknown function (DUF1509)


Domain annotation for each model (and alignments):
>> PF03982.8  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   2.1e-12   1.5e-08      56     176 ..     108     220 ..      67     223 .. 0.81
   2 !   53.6   0.0   1.7e-18   1.2e-14     175     285 ..     251     351 ..     236     355 .. 0.85

  Alignments for each domain:
  == domain 1    score: 33.6 bits;  conditional E-value: 2.1e-12
   PF03982.8  56 taeletdrnYliGyhPhgilsvgafvalatdatgvkekfpgirfnlatLagqfrtpfrreillllGlievs.resieyvLdkeekGravvlvvGGaeealeahpgketltLkkrkGfvkial 176
                   ++++d++ ++ yhPhg l vg     + +++   + ++ +  +  ++    ++p+   il ++G +e +   +++ ++++   G  + +++GG e+a  +++g e + LkkrkGf+k+a 
  MMETSP1325-20131115|7946_1 108 VDDIRKDKS-MLCYHPHGALCVGF----SWNGAHA-PELKHVDAKWLVVDVLMHAPIFGRILRWIGNVEGAdAGNMKRLMKQ---GTNIGIIPGGFEDATIMKKGSERIWLKKRKGFIKYAX 220
                 445666665.678********996....5555543.3446778888888899999*9999******9996515677777654...556*******************************995 PP

  == domain 2    score: 53.6 bits;  conditional E-value: 1.7e-18
   PF03982.8 175 alktGadLvPvysfGendvykqvenpkgsklrkvqeklkkvlglsppilyGrglfnsltlGllPfrk.pittvvGkPievtkteePtkeeidelhakYveaLaeLfeehkek 285
                 a + G ++ Pvy+fGe d ++ ++    +++     kl ++ ++  ++++G  +f      l+P     ++t +Gk i+ +k+eePtke++d+ h++Y +aL+ Lf++hk+ 
  MMETSP1325-20131115|7946_1 251 ARRYGYRVHPVYNFGECDTFDTFHWFAKLRM-----KL-NAYKIPAVLFFGNMFFP-----LFPRTDiNMHTFIGKAIDLPKIEEPTKEDVDKWHKTYSDALRALFDKHKAE 351
                 567889999***********99987666666.....44.56789999****66666.....788654389****************************************75 PP

>> PF07420.6  Protein of unknown function (DUF1509)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   4.5    0.0014       9.8     323     350 ..     229     256 ..     211     262 .. 0.66

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0014
   PF07420.6 323 gerrvsrrnrsesrsrsrsrsgerryrr 350
                 +  r++ r r+++r+r+r+r++ rry+ 
  MMETSP1325-20131115|7946_1 229 TRTRTRTRTRTRTRARARARARARRYGY 256
                 3345555666667777777777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       515  (0.0376682); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.36s 00:00:01.10 Elapsed: 00:00:00.50
# Mc/sec: 1845.19
//
Query:       MMETSP1325-20131115|7952_1  [L=553]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.4e-105  351.7   0.0   5.8e-105  351.3   0.0    1.2  1  PF01039.17 Carboxyl transferase domain


Domain annotation for each model (and alignments):
>> PF01039.17  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  351.3   0.0  4.2e-109  5.8e-105     164     493 .]       2     392 ..       1     392 [. 0.94

  Alignments for each domain:
  == domain 1    score: 351.3 bits;  conditional E-value: 4.2e-109
                 -B-----HHHHHH--.---STCCG---HCCCCT----SEEESSCCHHHHHHHHHHCTS-SSTTSTTS-----S-SS-SSS.CGHHHCS-BT.TB---HHHHHHHHS-............---EEEET----TTEEEEEEE----EE-EEEE-TT....................CC--.---HHHHHHHHHHHHHHHHTT--EEEEEEE-------CCCHTTTTT---HHHHHHHH--S-EEEEEEE..EE----CGGGTGCCGTT.CE..EETTT-EE--------HHHHTHHHHHCCCHHH.....HCHHHH......................HHHHHHHHHHHHTTCHHHHHHHHHCCCSSHHHHHHHHHHCCCCGGGGHH.HHHHHHHHHH CS
  PF01039.17 164 pifltGpdvvkkvlg.eevtseelgGadqhmaksGvahltaeddeealelirkllsylpkkasnnqedapivetldepdreeelasivPddskkpyDvreviarivD............eseFlEikegyAktvvtGfArlgGipvGvvAnetk....................veaG.vlfidsalKaarfirlcdaenlPlviladvrGflvGqrqeyggilkhGaklvyalaeatvPkitvilr..klyGGayvvmdskilgadav..aawptariaVlgpegaveilfrkekaaaemer.....keleal......................kkkklaeyeeellnpyvaaargfaDavidpsetraklvialellwkksr.kfyarkrrni 493
                 pi+ltG+++++k++g + +ts++++G++++m  +Gv+hl+++d ++a+   +++lsy+p  +++   + pi++  +  d  e   +++P+ +  +yD+r +i++               +s+F E+++g+Aktvv+G+ArlgGip+Gv+  e +                     +aG v+f+dsa+K+a++i++++ae+lP++i+a++rGf++Gqr++++++lk+Ga++v+al+  ++P++++i++  +l+GGa+vv+ds+i+++ ++  +a  ++r++Vl+p+++++i++rk++++ +++r     kel+a+                      +k ++ae+e  ++ +y+++a++faD+++ p++++a++v  +e+ w+ sr +fy+r++r++
  MMETSP1325-20131115|7952_1   2 PIILTGYQALNKLMGkNIYTSNDQLGGPMIMFPNGVSHLLVDDHLAAVLAGVNWLSYVPSVRGM---PLPITDI-TGIDMVERPVQWRPKTKGVAYDPRYLICGQDSevdgqwvsgffdKSSFTETLNGWAKTVVCGRARLGGIPMGVIVTENRtvealtpadpadptsmekntFQAGgVWFPDSAYKTAQAINDFNAEDLPVMIFANWRGFSGGQRDMFDEVLKFGAQIVDALVAFKQPIFVYIPPfaELRGGAWVVVDSTINPD-VMefFAADDSRGGVLEPDAIASIKYRKKDLTVTAHRldavlKELDAKlaadaspdatpadkldeaqradIKAQIAERETLVMGIYQQIAVQFADLHDGPGRMAATGVVVSEVPWESSRsYFYWRLKRRL 392
                 79*********************************************************66666...8888765.3344433346******************9887899****************************************99999*******************55555***********************************************************************************9999.888*8888*****************************99996666668888999999999999999999********************************************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.38s 00:00:01.26 Elapsed: 00:00:00.59
# Mc/sec: 2246.08
//
Query:       MMETSP1325-20131115|7956_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 333.61
//
Query:       MMETSP1325-20131115|7957_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|7958_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-05   23.0  17.1      0.036   13.8   6.0    2.7  2  PF04554.8 Extensin-like region


Domain annotation for each model (and alignments):
>> PF04554.8  Extensin-like region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   8.4   5.8e-06     0.079       5      57 ..       5      69 ..       1      69 [. 0.60
   2 !   13.8   6.0   2.6e-06     0.036      15      57 ..      43      94 ..      39      97 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.8e-06
   PF04554.8  5 spPppekss...Pppp.....yvyksPPPpspykYksPPPpv.ykyksPpPpkk...ykYksPPP 57
                 pPp        Ppp       ++  PPP     +  PPP +   ++ PpP+       +  PPP
  MMETSP1325-20131115|7958_1  5 APPPGGDAGfgaPPPDasdagAMFGAPPPGGDAGFGAPPPAAdAGFGAPPPDAGdagAMFGAPPP 69
                55555555556555543333344888888755678888884413467777776677777888877 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 2.6e-06
   PF04554.8 15 ppp..yvyksPPPp...spykYksPPP.pvykyksPpPpkk...ykYksPPP 57
                pp     +  PPP     + ++  PPP +   ++ PpP+ +     +  PPP
  MMETSP1325-20131115|7958_1 43 PPAadAGFGAPPPDagdAGAMFGAPPPgGDAGFSAPPPDASdagAMFGAPPP 94
                3332245899999955333899999995555678888887788899999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        62  (0.00453482); expected 273.4 (0.02)
Passed bias filter:                       33  (0.00241369); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.30s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 579.58
//
Query:       MMETSP1325-20131115|7959_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0052   16.6   5.5     0.0065   16.3   3.8    1.2  1  PF04519.8  Polymer-forming cytoskeletal
  ------ inclusion threshold ------
      0.018   14.3   1.0      0.019   14.2   0.7    1.1  1  PF06390.7  Neuroendocrine-specific golgi protein P55 (NESP55)
      0.083   12.5   1.5      0.089   12.4   1.1    1.1  1  PF05887.6  Procyclic acidic repetitive protein (PARP)
       0.35   10.9   4.1        3.4    7.8   2.6    2.1  1  PF02566.14 OsmC-like protein
       0.78    9.6   3.8        2.9    7.8   2.6    1.9  1  PF13861.1  FlgD Tudor-like domain
        1.9    8.6   9.1       0.21   11.7   1.5    2.3  3  PF03544.9  Gram-negative bacterial tonB protein


Domain annotation for each model (and alignments):
>> PF04519.8  Polymer-forming cytoskeletal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   3.8   2.9e-06    0.0065      18      68 ..      25      71 ..      22      77 .] 0.81

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 2.9e-06
   PF04519.8 18 egelridGkveGnikaegklvigesgkveGeikaeeviinGeveGnveake 68
                +g ++++ +veG+++ eg++ ++ +g+ve e++   v+++GeveG v+++ 
  MMETSP1325-20131115|7959_1 25 CGWVEVEVEVEGEVEGEGEVEVEVEGEVEVEVE---VEVEGEVEG-VRVRL 71
                567899999***********9999999999986...679999999.55554 PP

>> PF06390.7  Neuroendocrine-specific golgi protein P55 (NESP55)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.7   8.4e-06     0.019     118     148 ..      31      61 ..      10      71 .. 0.48

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 8.4e-06
   PF06390.7 118 eteseseieseteietepetesetapttepe 148
                 e e e e+e e e+e+e e e e     e e
  MMETSP1325-20131115|7959_1  31 EVEVEGEVEGEGEVEVEVEGEVEVEVEVEVE 61 
                 2333333333333332222222222222222 PP

>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.1   3.9e-05     0.089      80     113 ..      30      63 ..       9      70 .. 0.49

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.9e-05
   PF05887.6  80 tepeeegeeetepeeeeepepepetepepepepe 113
                  e e ege e e e e e e e e e e e e e
  MMETSP1325-20131115|7959_1  30 VEVEVEGEVEGEGEVEVEVEGEVEVEVEVEVEGE 63 
                 3333333333333333333333333333333222 PP

>> PF02566.14  OsmC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.6    0.0015       3.4      35      61 ..      48      71 ..      19      77 .] 0.48

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0015
                -.SEEEEEEE--B-SS------EEEEEE CS
  PF02566.14 35 l.eslevevegerdpegfrgfeeirlkv 61
                +  ++eveve+e + e    +e++r+++
  MMETSP1325-20131115|7959_1 48 VeGEVEVEVEVEVEGE----VEGVRVRL 71
                2223333333333333....45555444 PP

>> PF13861.1  FlgD Tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.6    0.0013       2.9      18      36 ..      35      69 ..       5      70 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0013
                x................xxxxxxxxxxxxxxxxxx RF
   PF13861.1 18 p................kaveatvlvsgrVdsVti 36
                +                 +ve+ v+v g+V++V+ 
  MMETSP1325-20131115|7959_1 35 EgevegegevevevegeVEVEVEVEVEGEVEGVRV 69
                3777777777777889989**************85 PP

>> PF03544.9  Gram-negative bacterial tonB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.9   6.6e+03      70      77 ..       4      11 ..       2      12 .. 0.44
   2 ?    1.3   0.1      0.15   3.5e+02      16      31 ..      24      39 ..      18      45 .. 0.79
   3 ?   11.7   1.5     9e-05      0.21      13      36 ..      47      70 ..      41      74 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 2.9
                ..EEEEEE CS
   PF03544.9 70 kvtvpirF 77
                +vtv +r+
  MMETSP1325-20131115|7959_1  4 RVTVMVRY 11
                33335555 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.15
                --EEEEEEE-----EE CS
   PF03544.9 16 GtvtveftidadGkvk 31
                G+ +ve+ +  +G+v+
  MMETSP1325-20131115|7959_1 24 GCGWVEVEVEVEGEVE 39
                6667788888888876 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 9e-05
                T----EEEEEEE-----EEEEEEE CS
   PF03544.9 13 gieGtvtveftidadGkvkdvkvl 36
                ++eG+v+ve+ +  +G+v+ v+v 
  MMETSP1325-20131115|7959_1 47 EVEGEVEVEVEVEVEGEVEGVRVR 70
                68*******************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|7954_1  [L=354]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-50  169.7   0.7    8.4e-50  169.5   0.5    1.1  1  PF00208.16 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
    1.5e-14   53.5   0.0    2.9e-14   52.6   0.0    1.5  1  PF02812.13 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
  ------ inclusion threshold ------
      0.016   14.2   0.1      0.038   13.0   0.0    1.5  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
       0.02   15.0   0.0      0.053   13.6   0.0    1.7  1  PF13241.1  Putative NAD(P)-binding
      0.048   13.4   0.1       0.39   10.5   0.1    2.4  3  PF01661.16 Macro domain
      0.056   13.4   0.1       0.12   12.3   0.0    1.5  1  PF01488.15 Shikimate / quinate 5-dehydrogenase
      0.074   12.7   0.1        1.4    8.5   0.0    2.3  2  PF06541.6  Protein of unknown function (DUF1113)


Domain annotation for each model (and alignments):
>> PF00208.16  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.5   0.5   4.3e-53   8.4e-50       9     244 .]     117     352 ..     107     352 .. 0.94

  Alignments for each domain:
  == domain 1    score: 169.5 bits;  conditional E-value: 4.3e-53
                 CCC---HHHHHHHHHH.TT--CCC-EEEEE----HHHHHHHHHHHT--EEEEE------EE-S-HH...HHHHHHHHHHHH--ECCCCCH.H-S--CE--HH.HHCCSS-SEEEE-.SSTTSBSTTHHHHHHHTT-SEEE-SSSS-BSHHHHHHHHHTT-EEE-HHHHT----HHHHHHHHHHHCTS---HHHHHHHHHHHHHHHHHHHHHHHHHHT--..HHHHHHHHHHHHHHHHHHHT- CS
  PF00208.16   9 aTglGvvyyveemlkklgldslegkrvaiqGsGnvgsyaaelltelgakvvavsDssGviydpngl...dleellelkeekksrvkeykkssadkaeyieneeelweikvDilvPc.AtqneineenakelikngvklvvEgANmpltqeakeileeagilvapdkaaNaGGVtvSalEmlqnsqrlswteeevdeklkkimkeifkavveeakeykve..lvkaaniagfervaeamkarG 244
                 a g+Gvv+++++ml++ ++dsl+gk+++i GsGn + ++ae+l++ ga  +++sDssG +y+++g+   +l++++++k+e+++r+  y   s+ +a+y +  e+++e+++D+l+Pc    n+i ++ ++ l +ng+  v+Eg Nmp+t+ea   ++++g+l++p ka+ a G +v + Em  n  +   t+ee de+l + ++++++++ ++a+e ++   lv++ nia+f +va+ m a+G
  MMETSP1325-20131115|7954_1 117 AYGFGVVHFANKMLEE-KGDSLKGKKCVITGSGNMAMAVAEKLIHFGAVPITLSDSSGHVYEEDGIdasKLATIKQIKAERGARIGRYIMAST-TAKYSDP-ENILEVPCDLLFPCcVGSNKIGADGVNLLADNGCMGVIEGGNMPSTPEAMATYKKRGMLYGPYKATMAAGAIVNGNEMEVNPIS---TNEELDERLADAVDDVYDKITKTATEFNARgdLVAGTNIASFLKVANVMMAHG 352
                 5699************.*************************************************87778888899999999*****97555.5677666.6*************6668*********999***************************************************666...**************************999999*****************9987 PP

>> PF02812.13  Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   1.5e-17   2.9e-14      38     130 ..       2      93 ..       1      94 [. 0.96

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 1.5e-17
                 ----BTT--HHHHHHHHHHHHHHHHHTTS-----B---B--GGGS-HHHHHHHHHHHHHHHGGG----SB-----TT--HHHHHHHHHHHHHH CS
  PF02812.13  38 GiRlhpyvseeevkaLarlmtlKnalaglplGGgkggikvdpkdlsknekerlvrafgrelekiigpdryipapDvgtderemawiadeyrrl 130
                 G+ + ++v+++ v aLa+   + n+l+g + G + gg +++ +++s+ e++r+++++++el+k+ig+d ++p++  g++++e+++++++y+r+
  MMETSP1325-20131115|7954_1   2 GLTFGSDVNTDYVTALAFDALVSNSLYG-NTGAAFGGSDFNVRNKSEPEIQRFCQSYMTELAKYIGDDVDLPGMGAGVNPQEIGYLYGQYKRI 93 
                 6778899*********************.89***********************************************************997 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.9e-05     0.038      28      70 ..     131     174 ..     118     193 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.9e-05
                 CG-B-.GGGSEEE-B-------HHHHHHHH---.EEEE--SS-- CS
  PF02826.14  28 allgkelsgktvGiiGlGrIGqavakrlkafgm.kvlaydrskk 70 
                 + +g +l+gk+  i G G+++ ava++l  fg+  ++  d s +
  MMETSP1325-20131115|7954_1 131 EEKGDSLKGKKCVITGSGNMAMAVAEKLIHFGAvPITLSDSSGH 174
                 678999**************************956666666655 PP

>> PF13241.1  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.7e-05     0.053       5      40 ..     137     172 ..     136     219 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.7e-05
                 -TT-EEEEE-------HHHHHHTT---EEEEE-SS- CS
   PF13241.1   5 lkgkkvlvvGgGevAarkvrklleagakvtvvspei 40 
                 lkgkk+++ G G++A+  ++kl+++ga  + +s ++
  MMETSP1325-20131115|7954_1 137 LKGKKCVITGSGNMAMAVAEKLIHFGAVPITLSDSS 172
                 89************************9766666554 PP

>> PF01661.16  Macro domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.2   2.4e+03      71     106 ..      43      78 ..      34      80 .. 0.73
   2 ?   10.5   0.1    0.0002      0.39       7      63 ..     103     162 ..      96     209 .. 0.80
   3 ?   -1.0   0.0      0.73   1.4e+03      69      92 ..     298     322 ..     242     347 .. 0.60

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.2
                 -CCHHHHHHHHHHHHHHHHHHTT-SEEEEE-TT--- CS
  PF01661.16  71 skeeeellasayknalelaeekgiksvafPaistGi 106
                 ++++e ++++  ++ + ++++     v +P +++G+
  MMETSP1325-20131115|7954_1  43 RNKSEPEIQRFCQSYMTELAKYIGDDVDLPGMGAGV 78 
                 566677777777777777777777788888888887 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.0002
                 T----S--HHHHHHHH--HHHHHHHHHHHHHHH.--TT-EEEEE-GGCS...SSEEEEEE- CS
  PF01661.16   7 nllgggGvagaihraagkalkeeckelekkqgg.illGeavvtpaynlp...akyvihavg 63 
                  ll+gg + g + ra+g  +   ++++ +++g+ ++  ++v+t+++n+    a+++ih+ g
  MMETSP1325-20131115|7954_1 103 GLLWGGMLEGKLCRAYGFGVVHFANKMLEEKGDsLKGKKCVITGSGNMAmavAEKLIHF-G 162
                 589**************9999988776666666599999*********99999999999.3 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.73
                 -.--CCHHHHHHHHHHHHHHHHHHT CS
  PF01661.16  69 s.kskeeeellasayknalelaeek 92 
                   +++e +e+la+a++++ +++ + 
  MMETSP1325-20131115|7954_1 298 IsTNEELDERLADAVDDVYDKITKT 322
                 2355666677777777776665444 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.2e-05      0.12       4      40 ..     131     167 ..     128     172 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 6.2e-05
                 HH--....--EEEEE----HHHHHGGG--TTT-E.EE CS
  PF01488.15   4 kkkleslkgkkvlviGAGemarlvakhLlekgvkkiv 40 
                 ++k +slkgkk ++ G G ma +va+ L+  g+  i+
  MMETSP1325-20131115|7954_1 131 EEKGDSLKGKKCVITGSGNMAMAVAEKLIHFGAVPIT 167
                 567889***********************99988776 PP

>> PF06541.6  Protein of unknown function (DUF1113)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0   0.00072       1.4      27      52 ..     105     131 ..      86     161 .. 0.74
   2 ?    1.6   0.0     0.094   1.8e+02      25      44 ..     267     286 ..     251     298 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00072
   PF06541.6  27 vnrgflnGpfcpiYGfgavlvl.vllk 52 
                    g+l G +c  YGfg+v ++  +l+
  MMETSP1325-20131115|7954_1 105 LWGGMLEGKLCRAYGFGVVHFAnKMLE 131
                 4679***************98744444 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.094
   PF06541.6  25 kfvnrgflnGpfcpiYGfga 44 
                 ++ +rg+l+Gp+      ga
  MMETSP1325-20131115|7954_1 267 TYKKRGMLYGPYKATMAAGA 286
                 6789*******987665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 1696.62
//
Query:       MMETSP1325-20131115|7960_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|7961_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.086   12.4   0.0        0.1   12.1   0.0    1.1  1  PF06784.6 Uncharacterised protein family (UPF0240)


Domain annotation for each model (and alignments):
>> PF06784.6  Uncharacterised protein family (UPF0240)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.5e-06       0.1      13      49 ..      10      46 ..       3      54 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 7.5e-06
   PF06784.6 13 nvenRaekeiskeKPkpAPkfpstrddlervlseepe 49
                 +e+Ra+ +   + P+  P+++s r+ l r++++++e
  MMETSP1325-20131115|7961_1 10 DLEGRAHAQQVYTDPVQDPRHNSIRQVLDRKVDQTDE 46
                689*****************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 444.32
//
Query:       MMETSP1325-20131115|7962_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0091   15.8   9.3     0.0091   15.8   6.5    2.4  2  PF13863.1  Domain of unknown function (DUF4200)
  ------ inclusion threshold ------
       0.16   11.7   7.2      0.081   12.6   2.3    1.9  2  PF09432.5  Tho complex subunit THP2
       0.18   11.5   4.1       0.27   11.0   2.9    1.2  1  PF09729.4  Gti1/Pac2 family
        1.3    8.8   8.0       0.34   10.6   0.3    2.7  3  PF06103.6  Bacterial protein of unknown function (DUF948)
        4.3    7.1  11.3         34    4.2   7.8    2.0  1  PF11888.3  Protein of unknown function (DUF3408)
        7.3    6.6  16.8    1.6e+03   -0.9  11.6    2.2  1  PF00804.20 Syntaxin


Domain annotation for each model (and alignments):
>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   4.2      0.24   5.5e+02      35      67 ..       8      40 ..       1      50 [. 0.70
   2 !   15.8   6.5     4e-06    0.0091      11      71 ..      54     114 ..      45     136 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.24
   PF13863.1 35 eelekkqeelqeslikfnkflkdneakreraek 67
                e ++++++e +e+ +k  + ++++ +kr++a+ 
  MMETSP1325-20131115|7962_1  8 ELVQEQEQEEAETRTKTAELVQNASEKRDEARS 40
                445677777777777888888888888777764 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 4e-06
   PF13863.1  11 evqlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaee 71 
                  +ql   +kr e+ ++e +l+++e+ ++ ++++l+es+++ + +l++ ++  ++ +  +ee
  MMETSP1325-20131115|7962_1  54 TLQLDVRRKRTELVDREDRLAQEEKDIATSERQLRESKVQMDAYLTEYDQLFRKTQSLTEE 114
                 56888899***************************************99755444444433 PP

>> PF09432.5  Tho complex subunit THP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.3   3.5e-05     0.081      39     107 ..       5      72 ..       2      90 .. 0.86
   2 ?    1.0   0.2      0.14   3.1e+02      37      65 ..      91     119 ..      71     130 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 3.5e-05
   PF09432.5  39 elqeilkkyeaeeeeieelraelkkYldeikaeRakyalenkysLketLkqltkevseWrkeWeniesl 107
                 +l e +++ e+ee e+++  ael +   e k + a+    nk+ L+e L++l+ +v + r e  + e  
  MMETSP1325-20131115|7962_1   5 KLSELVQEQEQEEAETRTKTAELVQNASE-KRDEARSEQGNKFQLEEVLQTLQLDVRRKRTELVDREDR 72 
                 78888888889999999999999998877.7888999********************999998877765 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.14
   PF09432.5  37 peelqeilkkyeaeeeeieelraelkkYl 65 
                  +++ + l +y++  ++++ l +el++ +
  MMETSP1325-20131115|7962_1  91 KVQMDAYLTEYDQLFRKTQSLTEELEQQI 119
                 44556677777776666666666666654 PP

>> PF09729.4  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.9   0.00012      0.27      92     161 ..      23     120 ..       3     123 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00012
   PF09729.4  92 skkksesdeeekaakessskvdvekask....................................ssieaekeralvgs..ltdsykfkkdgLiKktisltvkegetlH 161
                 ++++  ++++ek+ + +s+        +                                        a++er+l  s  ++d y +++d L++kt slt + ++++H
  MMETSP1325-20131115|7962_1  23 KTAELVQNASEKRDEARSE--------QgnkfqleevlqtlqldvrrkrtelvdredrlaqeekD--IATSERQLRESkvQMDAYLTEYDQLFRKTQSLTEELEQQIH 120
                 1111111111111111111........02223344566678888888888888888888765321..2245555555411678999**************99999998 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.4      0.11   2.4e+02      35      67 ..       3      35 ..       1      40 [. 0.69
   2 ?    1.9   0.1      0.08   1.8e+02      57      88 ..      53      88 ..      44      90 .. 0.73
   3 ?   10.6   0.3   0.00015      0.34      25      68 ..      77     120 ..      70     128 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.11
   PF06103.6 35 vkkltkqvdgitketeellaktnelleDvneKv 67
                ++kl + v++  +e  e+ +kt el++  +eK 
  MMETSP1325-20131115|7962_1  3 MAKLSELVQEQEQEEAETRTKTAELVQNASEKR 35
                456666677777777777777777777777775 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.08
   PF06103.6 57 nelleDvneKvetl....dpvfqavadlgesvsdln 88
                ++l+ Dv +K ++l    d ++q+ +d+ +s ++l 
  MMETSP1325-20131115|7962_1 53 QTLQLDVRRKRTELvdreDRLAQEEKDIATSERQLR 88
                578889999988876666778888888888877775 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 0.00015
   PF06103.6  25 kktldevnktvkkltkqvdgitketeellaktnelleDvneKve 68 
                 +k +++ ++ +++ + q+d  ++e ++l  kt++l+e++++++ 
  MMETSP1325-20131115|7962_1  77 EKDIATSERQLRESKVQMDAYLTEYDQLFRKTQSLTEELEQQIH 120
                 5667778888999999***********************99976 PP

>> PF11888.3  Protein of unknown function (DUF3408)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   7.8     0.015        34       8      76 ..       4     110 ..       1     120 [. 0.81

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.015
   PF11888.3   8 eelkelvagdvsakeeesseeaegeepvsaeeekekkapep......................................eekqerisrkqrkasleeYretFLkvpk 76 
                  +l+elv+++++++ e+++++ae  +++s++ +++ +++++                                      +e+q r+s+ q +a l eY+++F k  +
  MMETSP1325-20131115|7962_1   4 AKLSELVQEQEQEEAETRTKTAELVQNASEKRDEARSEQGNkfqleevlqtlqldvrrkrtelvdredrlaqeekdiatSERQLRESKVQMDAYLTEYDQLFRKTQS 110
                 6789999999998888887777777777777777776666677788999999999999999999999999999999999999******************9966555 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9  11.6      0.69   1.6e+03      23      73 ..      70     120 ..       2     135 .. 0.65

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.69
  PF00804.20  23 veelkrlhsrilaspdpdkqtkeeleeltaeikklankirskLksleqsie 73 
                  ++l+++ ++i +s  + ++ k++++    e  +l++k++s  ++leq+i 
  MMETSP1325-20131115|7962_1  70 EDRLAQEEKDIATSERQLRESKVQMDAYLTEYDQLFRKTQSLTEELEQQIH 120
                 345666666666666666889999999999999999999999999999974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1716  (0.125512); expected 273.4 (0.02)
Passed bias filter:                      547  (0.0400088); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 656.60
//
Query:       MMETSP1325-20131115|7964_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0085   15.4   0.0      0.011   15.0   0.0    1.1  1  PF00664.18 ABC transporter transmembrane region
  ------ inclusion threshold ------
       0.16   11.7   2.0       0.22   11.3   0.9    1.5  2  PF08481.5  GBS Bsp-like repeat


Domain annotation for each model (and alignments):
>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.6e-06     0.011       2      85 ..      43     145 ..      41     146 .] 0.72

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.6e-06
  PF00664.18   2 llaillailagvtalvfplllgrllds........vsdgnde.........ersslyslailliavgvlivlllqgsfyl..lertgqrirkrlfrallrkil 85 
                 ++ai++++++ ++  v +++++++ d         + d+ d          e  +  + ++l+++++++++++l+g+++   +  +g r ++r++ +l++++l
  MMETSP1325-20131115|7964_1  43 TAAIMALVIQQIMDKVHSYWIAYWSDNleeedlqcWKDKQDSdepssincdEYETHSIGFYLGVYAAMAVAIGLFGMMRSigFAMVGLRSSTRMHDRLFENVL 145
                 5678888888899999999999999996666666644444447888888885555555555566666666666666655555*****************9987 PP

>> PF08481.5  GBS Bsp-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.48   3.3e+03      67      78 ..      24      33 ..       4      45 .. 0.52
   2 ?   11.3   0.9   3.2e-05      0.22      13      68 ..      47      98 ..      42     113 .. 0.73

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.48
   PF08481.5 67 netGkYnvhvYv 78
                  +G+Y++  Yv
  MMETSP1325-20131115|7964_1 24 VGMGTYST--YV 33
                33444443..33 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 3.2e-05
   PF08481.5 13 fdvvvsnvsapkkikevqvpvWSekngqdDlkWYeatkqadgsykvtvklsnHkne 68
                + +v++++   +k+++  ++ WS++ + +Dl+ ++ ++ +d+  +++ +  +  ++
  MMETSP1325-20131115|7964_1 47 MALVIQQI--MDKVHSYWIAYWSDNLEEEDLQCWKDKQDSDEPSSINCDEYE--TH 98
                56777888..78899999**************99997777777766665433..32 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       533  (0.0389848); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 714.02
//
Query:       MMETSP1325-20131115|7963_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.94    8.5  13.0       0.43    9.6   7.5    1.3  1  PF11593.3 Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   7.5   3.2e-05      0.43     107     190 ..      88     172 ..      83     179 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 3.2e-05
   PF11593.3 107 ekkfqvlEtLgsyaktgkasasasttkksaksnaattsstanTpaa..asvkkansasaPnatagvGsaattaaisattattpttt 190
                 e +f+  E  gs    g+a  +++ t   + ++a t+s+ta+ pa+  a v +a++a++   +ag G +++ +a+sa ++++p  +
  MMETSP1325-20131115|7963_1  88 EIEFFFAELFGSEHTIGEAEEAPAPTDAATSTSASTPSATAPSPAVvmAAVAEAQAAAE-AFGAGFGGSSSLSALSAPAPASPPNS 172
                 558999**************************************986688888866655.5679**99999999999988887544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 1470.49
//
Query:       MMETSP1325-20131115|7967_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0081   15.9   0.6      0.014   15.2   0.4    1.3  1  PF13770.1 Domain of unknown function (DUF4169)


Domain annotation for each model (and alignments):
>> PF13770.1  Domain of unknown function (DUF4169)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.4     1e-06     0.014      10      43 ..      63      96 ..      59      98 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1e-06
   PF13770.1 10 RKrkaRaekkaqAeeNRvkFGrtKaekelekara 43
                R +k+R +   +A   + ++Gr+ ae++ +++++
  MMETSP1325-20131115|7967_1 63 RGQKQRRQLSSHARLEAPEHGRPSAERQSAQQQR 96
                679***************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 540.45
//
Query:       MMETSP1325-20131115|7969_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-15   56.3   0.0    2.9e-15   56.0   0.0    1.1  1  PF02807.10 ATP:guanido phosphotransferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF02807.10  ATP:guanido phosphotransferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   2.1e-19   2.9e-15       9      75 ..      14      80 ..       7      81 .. 0.92

  Alignments for each domain:
  == domain 1    score: 56.0 bits;  conditional E-value: 2.1e-19
                HHHHH--HHHHHHHTT-B-----BHHHHHHHHHH-TT---------TTHHHHTHHHHHHHHHHHT-- CS
  PF02807.10  9 llkkhltkevyeklkdkkTklgvtLadcIqsGvdnpdskvGiyAgDeesYevFadlfdpvIedyHkg 75
                + k+ l  +v + +++ + ++ ++La c +sG+dnpds++G+yA D++ Y+ Fa +f +v edyH+g
  MMETSP1325-20131115|7969_1 14 CAKNLLESDVQDWMQELEDSQIAQLALCAKSGLDNPDSGLGCYAVDPKNYDEFAMFFVKVCEDYHHG 80
                4567788999999999999**********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 469.49
//
Query:       MMETSP1325-20131115|7968_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-12   46.4   0.4    4.4e-12   46.3   0.3    1.2  1  PF13519.1  von Willebrand factor type A domain
    1.2e-11   44.5   0.0    1.5e-11   44.2   0.0    1.1  1  PF00092.23 von Willebrand factor type A domain
    5.8e-06   25.9   0.8    0.00032   20.2   0.0    2.2  2  PF13768.1  von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.3   9.7e-16   4.4e-12       1      98 [.       2     110 ..       2     155 .. 0.84

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 9.7e-16
   PF13519.1   1 dlvlvlDvSgSM.....naedv.....sptrldaakaalkdlldel.pgdrvglvafsgsaelvapltsdraalkaa.lnsldprlmpgggtnlaaalalalellakadg 98 
                 d++ v+DvS+SM     +++d+     + t l  +++a+k++++ l p+dr++lv+f+g+a +++ l + ++al++a +++l + l+p+g+tn+ ++l+ ++e l++a +
  MMETSP1325-20131115|7968_1   2 DVCCVVDVSASMsnlatYEKDGqqvsdGLTILNLVQHAVKTVMHILgPNDRLSLVTFNGRAKTIFGLRQMTDALREAsIDELMA-LKPSGKTNIWDGLYHGMETLRAAED 110
                 6899********877664445555554599**************9758********************9999997665999995.9*******************98862 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.0   3.3e-15   1.5e-11       1      95 [.       2     108 ..       2     126 .. 0.84

  Alignments for each domain:
  == domain 1    score: 44.2 bits;  conditional E-value: 3.3e-15
                 EEEEEEE-STTS-H........HH.......HHHHHHHHHHHHHHH.CCTTTEEEEEEEESSSEEEEE-TCCHHCCSSCGGHH-CCGGSTTS-B-HHHHHHHHHHHTTST CS
  PF00092.23   1 DivfvlDgSgSige........en.......fekvkefikkliekldigpdsvrvglvqyssdaktevslndfkskeellsavsknlkylgggtntgkALkyalenlfss 95 
                 D++ v+D+S S+++        ++       +++v++++k+++    i   ++r +lv+++++akt++ l+++++    +s       +++g tn+ ++L + +e l   
  MMETSP1325-20131115|7968_1   2 DVCCVVDVSASMSNlatyekdgQQvsdgltiLNLVQHAVKTVMH---ILGPNDRLSLVTFNGRAKTIFGLRQMTDALREASIDELMALKPSGKTNIWDGLYHGMETLRAA 108
                 9*************98887666116667777*************...99************************77444444448999999***************99876 PP

>> PF13768.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.5   0.1     0.005        23       2      15 ..       2      15 ..       1      21 [. 0.85
   2 !   20.2   0.0     7e-08   0.00032      18      92 ..      33     105 ..      23     145 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.005
   PF13768.1  2 evVivvDvsssmsg 15
                +v  vvDvs+sms 
  MMETSP1325-20131115|7968_1  2 DVCCVVDVSASMSN 15
                8899********96 PP

  == domain 2    score: 20.2 bits;  conditional E-value: 7e-08
   PF13768.1  18 velvkdaLsailrsLpprdkvnvvlfgtearplfpgsravssaelqellqkvkeleadlGasnlegaLkealrqp 92 
                 ++lv++a + ++  L+p+d++++v+f  +a+  + g r++++a +++  +++++l++ +G +n++  L   ++++
  MMETSP1325-20131115|7968_1  33 LNLVQHAVKTVMHILGPNDRLSLVTFNGRAK-TIFGLRQMTDALREASIDELMALKP-SGKTNIWDGLYHGMETL 105
                 78***************************77.66677999999999999********.9*********9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.33s 00:00:00.79 Elapsed: 00:00:00.57
# Mc/sec: 706.51
//
Query:       MMETSP1325-20131115|7971_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.006   16.6   0.7     0.0083   16.1   0.5    1.2  1  PF03247.9 Prothymosin/parathymosin family


Domain annotation for each model (and alignments):
>> PF03247.9  Prothymosin/parathymosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.5   6.1e-07    0.0083      58      87 ..      62      91 ..      50      96 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 6.1e-07
   PF03247.9 58 eeedeeeegegeeeeeeeeeeeegatvkra 87
                eeed e++g+g+e+ ++++e  e  + kr 
  MMETSP1325-20131115|7971_1 62 EEEDAEGDGGGDEDHGDDDELIETNSWKRV 91
                799*****************9999998885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|7973_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.4   0.2       0.12   12.1   0.1    1.1  1  PF06479.7 Ribonuclease 2-5A
       0.12   12.5   1.1       0.15   12.3   0.4    1.4  2  PF12220.3 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal


Domain annotation for each model (and alignments):
>> PF06479.7  Ribonuclease 2-5A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.7e-05      0.12      37      76 ..      17      66 ..       2      71 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.7e-05
   PF06479.7 37 sadwtkkldkalledlgkfrk..........ykgdsvrDLLralRnkkeH 76
                ++ w+++++ka  + l k r+          y+++ + D++ ++ nkk+H
  MMETSP1325-20131115|7973_1 17 TNFWNEEMSKADEKFLTKKRQtnrkqglhdwYTEQDITDIVAIILNKKDH 66
                34455444433333333332255569***********************9 PP

>> PF12220.3  U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   2.1e-05      0.15      34      82 ..       7      54 ..       2      66 .. 0.86
   2 ?   -1.8   0.0      0.54   3.7e+03      52      64 ..      65      78 ..      55      81 .] 0.50

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.1e-05
   PF12220.3 34 tkkitGvaqylkelkdykeepppeptetkeekkerekkekkekneekle 82
                +kkit v ++ + +++++++  +e++ tk+ +  r++  +    e++++
  MMETSP1325-20131115|7973_1  7 KKKITTVDAWTNFWNEEMSKA-DEKFLTKKRQTNRKQGLHDWYTEQDIT 54
                578***************765.8*************9999888888776 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.54
   PF12220.3 52 eepp.peptetkee 64
                + pp ++ + t++e
  MMETSP1325-20131115|7973_1 65 DHPPvDKVLNTPKE 78
                33341333444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       753  (0.0550761); expected 273.4 (0.02)
Passed bias filter:                      570  (0.041691); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 388.21
//
Query:       MMETSP1325-20131115|7974_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   12.6   0.0       0.14   11.6   0.0    1.4  1  PF13556.1 PucR C-terminal helix-turn-helix domain


Domain annotation for each model (and alignments):
>> PF13556.1  PucR C-terminal helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.9e-06      0.14       2      26 ..      34      58 ..      34      59 .. 0.96

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.9e-06
   PF13556.1  2 leTLraylenggnlaatAkaLfvHr 26
                l+T+ a l+ g+++++   +L+vHr
  MMETSP1325-20131115|7974_1 34 LDTIVAILQDGRRVQRIGGKLHVHR 58
                689*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 415.97
//
Query:       MMETSP1325-20131115|7970_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00064   19.1   5.1       0.81    9.2   0.0    4.3  5  PF13414.1  TPR repeat
  ------ inclusion threshold ------
      0.028   14.2   3.4         23    5.1   0.0    4.8  6  PF07719.12 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.2   0.00037       2.5      14      32 ..       4      22 ..       1      66 [. 0.71
   2 !    9.2   0.0   0.00012      0.81      37      69 .]      90     121 ..      52     121 .. 0.74
   3 !    9.1   0.2   0.00013      0.86       3      47 ..      90     134 ..      88     149 .. 0.63
   4 ?   -0.2   0.0      0.11   7.2e+02      17      35 ..     177     195 ..     176     207 .. 0.82
   5 ?   -2.6   0.0      0.57   3.9e+03      27      38 ..     216     227 ..     214     232 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00037
   PF13414.1 14 fkegdydeAieayekAlel 32
                 ++g+ d A+ +y++A+e 
  MMETSP1325-20131115|7970_1  4 TTKGQIDRAVLYYDQAVET 22
                5789************985 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00012
   PF13414.1  37 aelyynlAlaylklgkdyeeAledyekAleldP 69 
                 a++++n++l+ +k++  y  Al+d+ ++ el+P
  MMETSP1325-20131115|7970_1  90 AVCLSNRSLVRIKQNSTY-GALRDAMRSEELAP 121
                 56***********98655.89*******99998 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.00013
   PF13414.1   3 AealkelGnalfkegdydeAieayekAleldpnnaelyynlAlay 47 
                 A +l ++  + +k++   +A++   ++ el p +a++ +++++a+
  MMETSP1325-20131115|7970_1  90 AVCLSNRSLVRIKQNSTYGALRDAMRSEELAPTYAKAAFRRGAAH 134
                 444455555555555555566666666666666666666666665 PP

  == domain 4    score: -0.2 bits;  conditional E-value: 0.11
   PF13414.1  17 gdydeAieayekAleldpn 35 
                 ++++ A+  +e+A  ld++
  MMETSP1325-20131115|7970_1 177 KQWKLAVLSFERAGGLDSS 195
                 7999999999999777765 PP

  == domain 5    score: -2.6 bits;  conditional E-value: 0.57
   PF13414.1  27 ekAleldpnnae 38 
                 ++A++ dp++ e
  MMETSP1325-20131115|7970_1 216 QEAVASDPDCHE 227
                 688899998655 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0033        23      14      29 ..       6      21 ..       3      26 .. 0.91
   2 ?    4.4   0.1    0.0054        37      20      33 ..      54      67 ..      49      68 .. 0.91
   3 ?   -0.3   0.0      0.17   1.2e+03       3      33 ..      92     122 ..      90     123 .. 0.83
   4 ?   -0.6   0.1      0.21   1.4e+03       1      12 [.     124     135 ..     124     138 .. 0.73
   5 ?   -1.3   0.0      0.36   2.4e+03      14      27 ..     176     189 ..     173     193 .. 0.84
   6 ?   -2.2   0.0      0.69   4.7e+03      24      33 ..     215     224 ..     214     225 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0033
                TT-HHHHHHHHHHHHH CS
  PF07719.12 14 lgdyeeAleafekAle 29
                +g+ ++A+ ++++A+e
  MMETSP1325-20131115|7970_1  6 KGQIDRAVLYYDQAVE 21
                6999**********97 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.0054
                HHHHHHHHHHH-TT CS
  PF07719.12 20 AleafekAleldPn 33
                A++a++ A +ldP+
  MMETSP1325-20131115|7970_1 54 ARAALKAAYRLDPT 67
                9************7 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 0.17
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                 +l n+ l+ +k++    Al++  ++ el+P+
  MMETSP1325-20131115|7970_1  92 CLSNRSLVRIKQNSTYGALRDAMRSEELAPT 122
                 6788888889999889999999999999998 PP

  == domain 4    score: -0.6 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHH CS
  PF07719.12   1 aealynlGlayy 12 
                 a+a +++G a++
  MMETSP1325-20131115|7970_1 124 AKAAFRRGAAHE 135
                 567788888875 PP

  == domain 5    score: -1.3 bits;  conditional E-value: 0.36
                 TT-HHHHHHHHHHH CS
  PF07719.12  14 lgdyeeAleafekA 27 
                 +++++ A+  fe+A
  MMETSP1325-20131115|7970_1 176 AKQWKLAVLSFERA 189
                 67899999999998 PP

  == domain 6    score: -2.2 bits;  conditional E-value: 0.69
                 HHHHHHH-TT CS
  PF07719.12  24 fekAleldPn 33 
                 +++A++ dP+
  MMETSP1325-20131115|7970_1 215 MQEAVASDPD 224
                 6899999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.41s 00:00:00.97 Elapsed: 00:00:00.54
# Mc/sec: 1065.05
//
Query:       MMETSP1325-20131115|7975_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-07   31.0   0.0    1.9e-07   30.5   0.0    1.2  1  PF00085.15 Thioredoxin
  ------ inclusion threshold ------
      0.024   14.6   0.0      0.032   14.2   0.0    1.2  1  PF13905.1  Thioredoxin-like
        0.1   11.9   0.0       0.11   11.8   0.0    1.1  1  PF13728.1  F plasmid transfer operon protein


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   4.1e-11   1.9e-07      16      76 ..      25      86 .]      12      86 .] 0.89

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 4.1e-11
                HHHSCEEEEEE-TT---HH.HHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTT--SSSEE CS
  PF00085.15 16 ksdklvlvefyApwCGhCk.alaPeyeklaeelkekvvlakvdvdenkdlaseygvegiPtl 76
                +++k   v f+A w  + k +++ ++++la ++ ++v ++kv++++ ++++++ +v+++Pt+
  MMETSP1325-20131115|7975_1 25 AATKATTVFFWARWHEPSKgQMSQVFDALAGQYGGQVNFVKVEAETAPEISAKHSVSVVPTF 86
                3469999************789***************************************8 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   6.9e-06     0.032       2      46 ..      28      70 ..      27      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 6.9e-06
   PF13905.1  2 kivllyfaaswcppckaftpelke.lyeklkaskdkveivyVsldr 46
                k + ++f+a w +p+k  ++++ + l  +++    +v++v V++ +
  MMETSP1325-20131115|7975_1 28 KATTVFFWARWHEPSKGQMSQVFDaLAGQYG---GQVNFVKVEAET 70
                7899*************99986543899998...899999998765 PP

>> PF13728.1  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.4e-05      0.11     118     167 ..      24      75 ..       5      81 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.4e-05
   PF13728.1 118 la..keyGlfffyrsdcpycealapilqafaekygievlpVsvDGkglpelp 167
                 la  k   +ff  r  +p   +++++ +a+a +yg +v +V v+  + pe+ 
  MMETSP1325-20131115|7975_1  24 LAatKATTVFFWARWHEPSKGQMSQVFDALAGQYGGQVNFVKVEAETAPEIS 75 
                 5433455567777779***************************999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 457.97
//
Query:       MMETSP1325-20131115|7977_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.63
# Mc/sec: 277.67
//
Query:       MMETSP1325-20131115|7979_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|7981_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|7980_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   13.7  41.2      0.033   13.7  28.6    1.0  1  PF08648.7 Protein of unknown function (DUF1777)


Domain annotation for each model (and alignments):
>> PF08648.7  Protein of unknown function (DUF1777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7  28.6   2.4e-06     0.033      20      74 ..       3      52 ..       1      61 [] 0.74

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.4e-06
   PF08648.7 20 rkrrrgrsrdRdrreRereRsrsreRdrarrrsRsrderrsrrsrSprrlksgre 74
                r+ r  rsrdRd ++R+r+R+r+ +Rd +rrrsRsr++ r +rsrSpr+  +++e
  MMETSP1325-20131115|7980_1  3 RDDR--RSRDRD-EDRDRRRDRDDDRDDDRRRSRSRSRSR-SRSRSPRD-DDRKE 52
                2222..477777.88999999999999999********99.899***99.33332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       556  (0.0406671); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.43s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|7982_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|7985_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.001   18.6   0.0     0.0012   18.5   0.0    1.1  1  PF02146.12 Sir2 family


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   8.4e-08    0.0012      69     113 ..       9      55 ..       3      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 8.4e-08
                 HHHHHHH---EEEEEE--SS-HHHH----..SEEE----TTEEEETT CS
  PF02146.12  69 flkklekkgkllrliTQNidnLekkaGsk..kvvelHGslakakcvk 113
                 +l++l   +    ++T Nid+   +aG    +++e+HGs   ++c +
  MMETSP1325-20131115|7985_1   9 LLEMLTVLNLDYFVLTSNIDGYFMRAGFDpdRLYEVHGSTDYLQCPS 55 
                 456666666677899*************999*************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|7984_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-29  101.6   0.3    4.4e-29  101.1   0.2    1.3  1  PF01201.17 Ribosomal protein S8e


Domain annotation for each model (and alignments):
>> PF01201.17  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.1   0.2   3.2e-33   4.4e-29      32     132 .]      17     207 .]       1     207 [] 0.87

  Alignments for each domain:
  == domain 1    score: 101.1 bits;  conditional E-value: 3.2e-33
                 X...............XXXXEE........S.HHH.CCCCCC.........................T----EEEE..............................CCCC-EEEEEETTTTEEEEEEEEEESSSSSTCHHHCTT---TT-EEEEESH---............EEEE-S-------B-EEB- CS
  PF01201.17  32 p...............aaetkl........gkvlskrvkqvr.........................vrggnrkvr..............................alrlkkanvthpeekvtrklrIidVkknpssneyvrtgvltKgaiievdvselg............larivsrpGqdGrvdgvvl 132
                 +               a++++l        +kvls++vkq+r                         +r+g+rk +                              +lr+kka+v hpe+++t++l+I++Vkknpss  y+++gv+tKg++iev+vs+lg            +a+++++p  dG++++v+l
  MMETSP1325-20131115|7984_1  17 QerdnkhanddavpkgAVPAYLldregvsrAKVLSNTVKQKRkekagkwdvpipkvkpvaddemfkvLRSGKRKAKawkrmvtkvcfvgdnftrknpkyerfirpsGLRFKKAHVCHPELQATFHLDILGVKKNPSSALYTQLGVITKGSVIEVNVSDLGlvttsgkvvwgkYAQVTNNPELDGCINAVLL 207
                 13333444445566669999999*****9999********************************************************************************************************************************6666666666666666666666******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1055.42
//
Query:       MMETSP1325-20131115|7987_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 258.81
//
Query:       MMETSP1325-20131115|7989_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.0   0.0       0.22   10.5   0.0    1.1  1  PF05202.7 Recombinase Flp protein


Domain annotation for each model (and alignments):
>> PF05202.7  Recombinase Flp protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   1.6e-05      0.22      78     120 ..      73     119 ..      68     128 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 1.6e-05
                 EEEEEE-S-TTS--EEEEE------....--HHHHHHHHHTT---EE CS
   PF05202.7  78 ilralvtetktrkeRfiyFfpvkgr....iDpllaLddylretePvk 120
                 +l  +v etk   +R ++ f +++r    + + +aL+++++++ Pv 
  MMETSP1325-20131115|7989_1  73 VLVWVVDETKDCDSRRVWVFHLQEReqgvVSLAVALHEHFQSCLPVL 119
                 6667899*************9986622225677899*******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1114.83
//
Query:       MMETSP1325-20131115|7991_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       828  (0.0605617); expected 273.4 (0.02)
Passed bias filter:                      659  (0.0482007); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.44s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|7993_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.7   0.2       0.19   11.0   0.1    1.4  1  PF07797.9 Protein of unknown function (DUF1639)


Domain annotation for each model (and alignments):
>> PF07797.9  Protein of unknown function (DUF1639)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   1.4e-05      0.19      21      33 ..      44      55 ..      36      64 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.4e-05
   PF07797.9 21 rPKKRpKkvQkql 33
                rP +R+++vQ+ l
  MMETSP1325-20131115|7993_1 44 RPARRARNVQR-L 55
                9*********8.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 317.88
//
Query:       MMETSP1325-20131115|7994_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.9   7.9       0.16   11.8   5.5    1.1  1  PF13863.1 Domain of unknown function (DUF4200)
       0.81    8.3   7.3       0.94    8.1   5.0    1.2  1  PF06697.7 Protein of unknown function (DUF1191)
        1.6    8.5   4.5          2    8.2   3.2    1.1  1  PF03938.9 Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   5.5   3.5e-05      0.16      19      72 ..      14      67 ..       4      78 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.5e-05
   PF13863.1 19 kreeierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaeee 72
                kr+ +er   + +er+++l+++q+   ++++  ++++++ +a+  r e+k+++ 
  MMETSP1325-20131115|7994_1 14 KRSRHERPAMTEEERRRKLREMQRDADDREVYRDEMIRKEKAEASREEEKTQTR 67
                78899999999***************************************9875 PP

>> PF06697.7  Protein of unknown function (DUF1191)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.0   0.00021      0.94     237     270 ..      24      57 ..      14      68 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00021
   PF06697.7 237 vrakrkkkreemerraeeeEalrvsmvgrsraps 270
                  +  r++k++em+r+a + E+ r  m+++ +a +
  MMETSP1325-20131115|7994_1  24 TEEERRRKLREMQRDADDREVYRDEMIRKEKAEA 57 
                 4567889**********************99854 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.2   0.00043         2      54     113 ..       4      63 ..       2      73 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00043
   PF03938.9  54 akkkelqkeqknlqseraqlsaeaekakeeelqakeqelqayaqqlqaelqaeqqevlqk 113
                 akk+e  + +k+ + er  +++e++ +k +e+q+ + + + y++++ ++ +ae  ++ +k
  MMETSP1325-20131115|7994_1   4 AKKAEPARPVKRSRHERPAMTEEERRRKLREMQRDADDREVYRDEMIRKEKAEASREEEK 63 
                 555666666777778899**************************9995544444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1191  (0.0871123); expected 273.4 (0.02)
Passed bias filter:                      692  (0.0506144); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.43s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|7990_1  [L=389]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      4e-29  101.5   0.1    7.1e-27   94.2   0.0    2.6  2  PF10127.4 Predicted nucleotidyltransferase


Domain annotation for each model (and alignments):
>> PF10127.4  Predicted nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.2   0.0   5.2e-31   7.1e-27       4     168 ..      23     262 ..      20     278 .. 0.92
   2 !    4.3   0.1    0.0014        19     168     233 ..     307     376 ..     303     384 .. 0.75

  Alignments for each domain:
  == domain 1    score: 94.2 bits;  conditional E-value: 5.2e-31
   PF10127.4   4 rileelaeiereeqvkilyacesGSrawGfaspdSDyDvrfvyiepaewylgl........eeerdvierpiddelDvsgwelrKalrlllksNptllEwLsspivylekvefleellslarelflsrrvahhYlgmaksqfrkl.......lkgeevr.................................................................lKkyfYvLRpllagrwllekg 168
                 +i++ ++++e+ ++v +l+a+e  Sr +G++ ++SD D+  ++++p+e y++l          + + ++ + + e+D+ g elr a+++l+ +Np+ll  + sp+vy+++ ++   +++++   +++ ++++++++ a ++++++       +     +                                                                  Kky++vLRpl +++wl e  
  MMETSP1325-20131115|7990_1  23 AISASIDQMEAMYGVTVLFAAEKSSRIFGTSHENSDCDIIAIFVHPLERYVSLkplatsvnVVTPEDPSSNGHCEIDIRGLELRHAFKMLATANPSLLDTMMSPLVYRAAPRWPSLIRRKMAATYSRAQLVMSWYNHAVKNYNQYivnrndpN-----KkgsrlrgkgkkraaaeaeagaksansgaeapveneeaaeaggrgdggdggdgdgtdgpgvedpviRKKYLHVLRPLWNIAWLVERT 262
                 6888999**********************************************999998874446666669999***********************************************************************98644331.....2366677999999*********************************************************************97765 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0014
   PF10127.4 168 gevpPmefeellaelv....dasllaeieeLlaikrggeekeeiarvpeldafiereleeakeksklpee 233
                 ++ pP e+  lla+l      ++++a ++e+l+   ++e     ar pel+a+ier l+++k+ + ++++
  MMETSP1325-20131115|7990_1 307 ESFPPLEIPALLASLGqevvAPRVRAVVAEILQPELRAELGRPLARLPELEAEIERLLSAYKQLTLEISR 376
                 5677777777777664211367788888888888888888888899*************99988777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1664.61
//
Query:       MMETSP1325-20131115|7996_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|7999_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        98  (0.00716793); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.33s 00:00:00.62 Elapsed: 00:00:00.46
# Mc/sec: 286.52
//
Query:       MMETSP1325-20131115|7995_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.8   2.0       0.11   12.1   0.8    2.1  2  PF09946.4 Predicted membrane protein (DUF2178)
        5.1    5.5   7.0        7.5    5.0   4.9    1.2  1  PF04625.8 DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF09946.4  Predicted membrane protein (DUF2178)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.1    0.0028        19      56      75 ..      61      80 ..       9      92 .. 0.71
   2 ?   12.1   0.8   1.6e-05      0.11      26      87 ..      69     127 ..      58     140 .. 0.69

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0028
   PF09946.4 56 rilrisekASrkTlqvvais 75
                ++  i  +AS  T+ v++++
  MMETSP1325-20131115|7995_1 61 LQASIDGRASTLTIAVFGLV 80
                5677999**********994 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 1.6e-05
   PF09946.4  26 nalvavlvviigilliillksrvdevveDErilrisekASrkTlqvvaisfAlagvvllafk 87 
                 + +++ ++v+  +ll+++    +  vv DEr+++++    +  + +++ ++  ag ++++f 
  MMETSP1325-20131115|7995_1  69 ASTLT-IAVFGLVLLVSMGTDALVAVVMDERSFHVAVSIQHWAFAIICTLV--AGWLMVTFA 127
                 33344.44444445555556667789**********999999999999954..477776665 PP

>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   4.9    0.0011       7.5     104     137 ..     163     196 ..     138     206 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0011
   PF04625.8 104 gaaapvpapapaaaaapaaasapaadspaasvpd 137
                  aaa + a ap +a++pa a+ paa   a+ + d
  MMETSP1325-20131115|7995_1 163 QAAASLAATAPEPAPTPARAAGPAATGNAPHAND 196
                 3555555555555555555555555555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       643  (0.0470304); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.38s 00:00:01.04 Elapsed: 00:00:00.61
# Mc/sec: 1288.53
//
Query:       MMETSP1325-20131115|8001_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 244.63
//
Query:       MMETSP1325-20131115|8003_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       78  (0.00570509); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|8005_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 288.45
//
Query:       MMETSP1325-20131115|8007_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-06   27.0   0.0    2.5e-06   26.7   0.0    1.1  1  PF03301.8 Tryptophan 2,3-dioxygenase


Domain annotation for each model (and alignments):
>> PF03301.8  Tryptophan 2,3-dioxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   1.8e-10   2.5e-06     254     312 ..     104     162 ..      21     165 .. 0.83

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 1.8e-10
   PF03301.8 254 GerrlshkalkGalmiyvYrdeprfselyqlleaLmDidelltkWRynHvvlvqRmlGs 312
                  + ++s  a+k a++ y +r +++    y l+++L+D+d  + +WR  Hv+  +  lG 
  MMETSP1325-20131115|8007_1 104 EKPKFSTAAIKSAFINYSFRHKKQCYPVYMLMKLLTDVDAAVGRWREIHVTFQHQLLGL 162
                 55689*************************************************99995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 1269.56
//
Query:       MMETSP1325-20131115|8008_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       470  (0.0343768); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 545.55
//
Query:       MMETSP1325-20131115|8009_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.34s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1163.23
//
Query:       MMETSP1325-20131115|8002_1  [L=440]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.053   13.2   0.0        1.4    8.7   0.0    2.6  2  PF00168.25 C2 domain
        3.1    5.8  14.6        4.8    5.1  10.1    1.3  1  PF09770.4  Topoisomerase II-associated protein PAT1
        8.5    6.1   8.1        1.3    8.7   0.5    2.8  2  PF14439.1  Bd3614-like deaminase


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0003       1.4      35      59 ..     208     273 ..     169     281 .. 0.63
   2 ?    1.4   0.0     0.054   2.5e+02      65      84 ..     306     325 ..     297     326 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0003
                 E.........................................EEE--BSS-SSEEEEEEEEEEESC CS
  PF00168.25  35 k.........................................krTrvikntlnPvWnekftfevva 59 
                 +                                          rT+   ++ nP+++++f++++++
  MMETSP1325-20131115|8002_1 208 QpqqqqrqqqeqqqeqhgggvfggdgdgdgdgdgdgtrsrrrCRTHARVRSPNPKYHQSFNMPLPF 273
                 0555555555555666666666666666666666666666669******************99665 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.054
                 EEEEEEECHSSSCSEE---E CS
  PF00168.25  65 leleVkdedrfgkddflGea 84 
                 + l+V+    +g+ddflGe 
  MMETSP1325-20131115|8002_1 306 MVLKVMSAHLLGRDDFLGES 325
                 8899**************85 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  10.1     0.001       4.8     242     319 ..     144     223 ..     118     275 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.001
   PF09770.4 242 qnlqqqqlpqlsqqmppqpvqppqqqqqqvlklp.........qaqppplqqlsaspqlaqqqlaslplpqqpqqkalvqqeqgqqe 319
                  + qqqq++q++qq+p +++ ++   + +v+  +          ++ p ++ +   p+       + ++p+qpqq++ +qqeq+q++
  MMETSP1325-20131115|8002_1 144 HQYQQQQQQQQQQQQPTEHPHAQYSCEVEVIGGDrlyrvgrgrRRHRPYVRLKLGVPN-------MAQPPSQPQQQQRQQQEQQQEQ 223
                 2222222222222233333322222222222222222211111222222222222222.......2222222222222222222221 PP

>> PF14439.1  Bd3614-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.5   0.00028       1.3      54      80 ..     230     256 ..     216     261 .. 0.81
   2 ?   -0.1   0.9      0.15     7e+02      49      68 ..     356     375 ..     347     423 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00028
   PF14439.1  54 dteddeiadrdgdgeeerrpleegarl 80 
                  +++d+++d+dgdg  +rr     ar+
  MMETSP1325-20131115|8002_1 230 GGDGDGDGDGDGDGTRSRRRCRTHARV 256
                 5899999999*****999998888887 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.15
   PF14439.1  49 eavdsdteddeiadrdgdge 68 
                 + + s++edd+++ +dg g 
  MMETSP1325-20131115|8002_1 356 TSTHSKGEDDHVGGGDGGGG 375
                 45569999999999888764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1002  (0.0732885); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.96u 0.36s 00:00:01.31 Elapsed: 00:00:00.51
# Mc/sec: 2067.45
//
Query:       MMETSP1325-20131115|8004_1  [L=440]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.5   0.0         11    6.3   0.0    2.8  2  PF12796.2 Ankyrin repeats (3 copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0   0.00077        11      29      64 ..     148     188 ..     115     243 .. 0.70
   2 ?    3.4   0.0    0.0061        83      49      81 ..     346     385 ..     187     396 .. 0.63

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00077
   PF12796.2  29 pLhlAaeagnleivklLleagadvnakd.....kegntpLh 64 
                 p ++A+++   e ++lL e+g+ +n +       + +++Lh
  MMETSP1325-20131115|8004_1 148 PESIAISNRLMERIDLLHEYGCRPNLTLcwpdkPHPRSVLH 188
                 66677777777777777777777777665555545555555 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.0061
   PF12796.2  49 gadvnakd.......kegntpLhlAvrnghlelvklLlek 81 
                 ga++n  d        +  + L +++ +g+++++ + +e+
  MMETSP1325-20131115|8004_1 346 GASLNRIDirdrfrrSDESSLLDCCIIQGRVDVIAWVVEE 385
                 4444444444444555666667777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 1952.59
//
Query:       MMETSP1325-20131115|8011_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-16   57.7   0.1    9.4e-16   57.6   0.1    1.0  1  PF01515.14 Phosphate acetyl/butaryl transferase


Domain annotation for each model (and alignments):
>> PF01515.14  Phosphate acetyl/butaryl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.1   6.9e-20   9.4e-16     220     278 ..       2      62 ..       1      63 [] 0.91

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 6.9e-20
                 HHHHHHHH-TTSEEE-EE-HHHHH-HHHHHHH-TT..SS-----SEEE-SSST---HHHHH CS
  PF01515.14 220 alkivkekepdlvvdGelqlDaAlseevaakkape..sevagkAnvlvfPdLeagnigyki 278
                 a++ ++e +p   ++G++q+DaA++++vaa k++     vag+A v vfP+L+agn +yk+
  MMETSP1325-20131115|8011_1   2 ATARARELAPGELIEGPIQFDAAVDSDVAAVKYKGteNAVAGRASVCVFPTLDAGNNAYKA 62 
                 778899***********************9988763378*********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|8012_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        89  (0.00650965); expected 273.4 (0.02)
Passed bias filter:                       82  (0.00599766); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 278.15
//
Query:       MMETSP1325-20131115|8015_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-19   67.1   0.1      8e-19   67.1   0.1    1.0  1  PF02028.12 BCCT family transporter


Domain annotation for each model (and alignments):
>> PF02028.12  BCCT family transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.1   5.8e-23     8e-19     145     210 ..       4      69 ..       1      78 [] 0.93

  Alignments for each domain:
  == domain 1    score: 67.1 bits;  conditional E-value: 5.8e-23
  PF02028.12 145 alayfayrkglpltissalypllgeriegplgkvvDilavlatvfGvatslGlgvlqiaaglself 210
                  ++ ++yr+++plti+ +lypl+g++++g+lg+++D+l+++ t+fGv+tslGlg  q+++g+++l 
  MMETSP1325-20131115|8015_1   4 LVGILSYRRDMPLTIRFCLYPLIGDHVYGLLGDLIDVLSMVVTLFGVCTSLGLGCFQLNKGMQRLD 69 
                 578899*********************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 373.83
//
Query:       MMETSP1325-20131115|8016_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-15   55.4   0.0    7.6e-15   54.8   0.0    1.2  1  PF01370.16 NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.083   13.3   0.1       0.15   12.5   0.1    1.4  1  PF06458.7  MucBP domain


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.8   0.0   1.1e-18   7.6e-15     143     227 ..       2      88 ..       1      95 [. 0.93

  Alignments for each domain:
  == domain 1    score: 54.8 bits;  conditional E-value: 1.1e-18
                 HHHHHHHHHHHHHHHHT-EEEEEEESEEE-TT....-SHHCHHHHHHHHHH---S.EEEE--TT-EEEEEEHHHHHHHHHHHHHSSS CS
  PF01370.16 143 aKlageklveayaeeyglnaiilrlfnvyGpr.nfdeevshvipalirkilegee.vtllgdGtqlRdflyveDvaealllvlehgd 227
                  Kl++e+++ aya+ +++ + + r+ nvyGp+   ++ +++  +a++rk+      + ++gdG+q R f++v+D++e++l++++ + 
  MMETSP1325-20131115|8016_1   2 EKLYAEEMALAYAKDFDIVTRVARYHNVYGPHgTWKGGREKAPAAFCRKAICSTDfFEMWGDGEQTRSFMFVDDCVEGSLRIMNSDY 88 
                 59************************************************988888***************************9875 PP

>> PF06458.7  MucBP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.3e-05      0.15      47      96 ..     160     221 ..     141     222 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
                 ....SSSB.-EE----TTB.........SSSE...........TCEEEEECCEEE-B----- CS
   PF06458.7  47 Wtl.sqtfeavtspdikGY.adkqkvsadqtv..........tedskdttvnvtYtknakia 96 
                 W   + + ea    di+GY ++k+ v+++++            ed++d ++nv+Y+ +a++ 
  MMETSP1325-20131115|8016_1 160 WIKeQADAEAAAGVDISGYgHSKVVVQTTESLvsnaagggsrPEDQSDAPENVKYDTTAQTG 221
                 666677777888889****8666666665555788999999777**************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 1099.50
//
Query:       MMETSP1325-20131115|8017_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.68
# Mc/sec: 560.32
//
Query:       MMETSP1325-20131115|8010_1  [L=509]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-06   27.4   0.0    3.1e-06   26.5   0.0    1.3  1  PF12843.2 Protein of unknown function (DUF3820)
      6e-06   26.6   1.9    1.4e-05   25.4   0.1    2.6  3  PF08238.7 Sel1 repeat
    0.00021   20.8   0.0         15    5.9   0.0    4.3  4  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12843.2  Protein of unknown function (DUF3820)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   6.7e-10   3.1e-06      15      51 ..     352     388 ..     347     392 .. 0.90

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 6.7e-10
   PF12843.2  15 PfGKYkgrllidLPeeYlvWfarkGfPkgkLGellal 51 
                  fGKY g+ l+++Pe+Y+ W +r+  P+  +G+ l  
  MMETSP1325-20131115|8010_1 352 EFGKYIGKPLTEIPESYIDWCRRQNRPSPVMGDSLMR 388
                 6*******************************98765 PP

>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.1   3.1e-09   1.4e-05       4      39 .]       2      35 ..       2      35 .. 0.93
   2 ?   -2.5   0.1       1.9   8.5e+03      31      37 ..      98     104 ..      98     106 .. 0.82
   3 ?   -2.3   0.0       1.6   7.2e+03       7      21 ..     217     228 ..     216     234 .. 0.64

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 3.1e-09
   PF08238.7  4 qynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                q  LG   +y++Gl Gv++d +kA  +++ AA+qGh
  MMETSP1325-20131115|8010_1  2 QHLLG--VLYQHGLCGVEQDESKATGLFRAAAAQGH 35
                789**..7779***88*******************9 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.9
   PF08238.7  31 yekAAeq 37 
                 +++AAe+
  MMETSP1325-20131115|8010_1  98 FRRAAEA 104
                 89***97 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 1.6
   PF08238.7   7 LGlyymylnGlgGvp 21 
                 L+ ++  l+G  Gv+
  MMETSP1325-20131115|8010_1 217 LAHIQ--LHGT-GVT 228
                 78445..9999.783 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.0    0.0053        24       1      24 []     163     186 ..     163     186 .. 0.95
   2 ?    1.4   0.0      0.09   4.1e+02       1      24 []     188     212 ..     188     212 .. 0.86
   3 !    5.9   0.0    0.0033        15       1      24 []     214     237 ..     214     237 .. 0.96
   4 ?    2.5   0.0      0.04   1.8e+02       1      24 []     239     262 ..     239     262 .. 0.92

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0053
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLan 24 
                 +++++ L+L   +++d G+  +an
  MMETSP1325-20131115|8010_1 163 CPKIQKLCLYPVNVTDFGVIEIAN 186
                 9******************99986 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.09
   PF13516.1   1 lknLtsLdL.snNqigdeGlsaLan 24 
                 +++L++++L  +  ++d G+  +an
  MMETSP1325-20131115|8010_1 188 CPKLREIRLfDHAAVTDAGVIEIAN 212
                 999999998567999****999986 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.0033
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLan 24 
                 +++L +++L +++++d  ++ +an
  MMETSP1325-20131115|8010_1 214 CPKLAHIQLHGTGVTDASAMEIAN 237
                 99*******************997 PP

  == domain 4    score: 2.5 bits;  conditional E-value: 0.04
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLan 24 
                 ++ L ++dL +++ +d G+  +an
  MMETSP1325-20131115|8010_1 239 CPELNWIDLTRTKATDAGVIEIAN 262
                 788999*************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.33s 00:00:01.14 Elapsed: 00:00:00.92
# Mc/sec: 1325.81
//
Query:       MMETSP1325-20131115|8013_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-18   67.1   0.0    2.3e-18   66.6   0.0    1.3  1  PF00175.16 Oxidoreductase NAD-binding domain
    5.8e-05   23.0   0.0     0.0001   22.2   0.0    1.3  1  PF00970.19 Oxidoreductase FAD-binding domain
    0.00024   20.5   0.0       0.26   10.5   0.0    2.2  2  PF00667.15 FAD binding domain
  ------ inclusion threshold ------
      0.093   12.4   0.0       0.16   11.6   0.0    1.4  1  PF08030.7  Ferric reductase NAD binding domain


Domain annotation for each model (and alignments):
>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.6   0.0   6.8e-22   2.3e-18       1      85 [.     207     298 ..     207     302 .] 0.91

  Alignments for each domain:
  == domain 1    score: 66.6 bits;  conditional E-value: 6.8e-22
                 EEE-----HHHHHHHHHHHCCH......CCCEEEEEEEESSGGGSTTHHHHHHHHHHSTTEEEEEEC.TTTTCSSSSBB--HHHHHHHCHHH CS
  PF00175.16   1 miaGGtGiaplrsvlkallede......detkvvlvyGvrteedlllreeleelakklpgrlkvvav.srtddgwkggkgyvtdalleelle 85 
                 m+a+GtGiap+rs++k+l+ +e       ++ ++l++Gv +++ ll+ +el+++++k+p+++++ +  sr+ +++kggk+y++d++ e+++e
  MMETSP1325-20131115|8013_1 207 MVATGTGIAPYRSFWKRLFIEEtpaaeaYKGLAWLFLGVANSDALLYDDELQSIKEKNPDNFRLDYAlSREMENKKGGKMYIQDKVEEYADE 298
                 9******************98668999988******************************88877777******************666655 PP

>> PF00970.19  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0     3e-08    0.0001      46      97 ..     125     193 ..     117     195 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 3e-08
                 EEEEEEE.SSST...T.EE-EEEEEEE--.............----HHHHHHC-----EEEEE-EE--E CS
  PF00970.19  46 evvRaYspassp...s.ekgelellvkvv.............pgGkmsqyldelkvgdtlelkGPlGkf 97 
                 + vR Ys+ass    + + ++++l+v++              + G  s+yl  +++g+ ++++GP Gk+
  MMETSP1325-20131115|8013_1 125 NSVRLYSIASSRygdDmTGKTCTLCVRRAtywcpelgaedpaKKGVCSNYLCDAAPGTEVKMTGPSGKV 193
                 579*******98553334556*******9**************************************97 PP

>> PF00667.15  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   7.7e-05      0.26       3      53 ..      66     115 ..      64     121 .. 0.91
   2 !    7.9   0.0   0.00049       1.7     180     219 .]     128     174 ..     125     174 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 7.7e-05
  PF00667.15   3 fdakkpflakvlknreLtkpsseRsvihleldisdsglkYqtGdhlgvyps 53 
                 +++k pf+ k+++++++  p+++ ++  + +d s+ ++ Y +G ++gv+p+
  MMETSP1325-20131115|8013_1  66 YKNKSPFVGKITSVKRIVGPKATGETCDIVIDHSG-KMPYWEGQSFGVIPP 115
                 67899************************999988.7************96 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00049
  PF00667.15 180 RyYSISSss...kvepnevhltvvvveyet.....gegrirkGvassy 219
                 R YSI+Ss+   +++ ++  l+v   +y +     +e +++kGv+s+y
  MMETSP1325-20131115|8013_1 128 RLYSIASSRygdDMTGKTCTLCVRRATY-WcpelgAEDPAKKGVCSNY 174
                 9*******82224555555555554444.2577888999********9 PP

>> PF08030.7  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.8e-05      0.16       3      86 ..     204     286 ..     202     299 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.8e-05
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF08030.7   3 nvllvagGiGitpfisilkdllkkskkealktkkikliwvvre..ssslewfkdvLneleeeksegnieihiYlTseyeaedasdq 86 
                  +++va G+Gi+p+ s+ k l+ ++   ++   +  l w++     s+  +++d L++++e+++  n+++   l++e e ++  + 
  MMETSP1325-20131115|8013_1 204 DIIMVATGTGIAPYRSFWKRLFIEET--PAAEAYKGLAWLFLGvaNSDALLYDDELQSIKEKNPD-NFRLDYALSREMENKKGGKM 286
                 589******************99988..5666666677776541145555788899999988888.88888888877777655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.36s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 1507.71
//
Query:       MMETSP1325-20131115|8018_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00048   19.4  19.2    0.00087   18.6   7.2    2.1  2  PF07423.6  Protein of unknown function (DUF1510)
      0.003   16.5  20.5     0.0082   15.1   7.4    2.1  2  PF09073.5  BUD22
     0.0041   16.6   0.0      0.009   15.5   0.0    1.5  1  PF04156.9  IncA protein
     0.0076   15.6  15.5     0.0088   15.4   3.7    2.2  2  PF03064.11 HSV U79 / HCMV P34
  ------ inclusion threshold ------
      0.034   12.4  18.0       0.22    9.7   8.4    2.0  2  PF10243.4  Microtubule-binding protein MIP-T3
       0.15   10.5   0.3       0.24    9.8   0.2    1.3  1  PF12794.2  Mechanosensitive ion channel inner membrane domain 1
       0.41   10.2   4.7          2    8.0   2.0    2.1  2  PF02862.12 DDHD domain
       0.71    9.4   3.0        1.6    8.3   2.0    1.8  1  PF08514.6  STAG domain
       0.74    8.9  26.2        0.4    9.8   1.2    2.1  2  PF05285.7  SDA1
          1    8.8   4.3       0.21   11.0   0.3    1.7  2  PF08374.6  Protocadherin
        1.2    8.8  12.4       0.28   10.9   3.2    2.1  2  PF06459.7  Ryanodine Receptor TM 4-6
        2.3    8.5  12.0        0.3   11.3   1.8    2.1  2  PF13882.1  C-terminal domain of Fibronectin type III
        2.7    7.8  25.4        1.8    8.4   9.0    2.1  2  PF08432.5  Fungal protein of unknown function (DUF1742)
        5.7    5.5  11.6        6.4    5.3   3.3    2.1  2  PF01698.11 Floricaula / Leafy protein
        6.1    5.2  34.3        1.7    7.1  12.9    2.1  2  PF10446.4  Protein of unknown function (DUF2457)
        7.9    5.5  19.9        0.5    9.4   1.2    2.1  2  PF06524.7  NOA36 protein
        9.1    4.0  24.4       0.29    9.0   0.4    2.0  2  PF02724.9  CDC45-like protein


Domain annotation for each model (and alignments):
>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   1.0    0.0063       5.1      62      95 ..      74     105 ..      62     146 .. 0.51
   2 !   18.6   7.2   1.1e-06   0.00087      14     105 ..     207     297 ..     203     303 .] 0.62

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0063
   PF07423.6  62 eeevkeeekeaakdedkeddsesekkdeeseeee 95 
                 +e v+++ ++  + +++ed  e+e++d+ +++++
  MMETSP1325-20131115|8018_1  74 KEGVEKDLEKMGEGDEDED--EDEDEDDRRRSKK 105
                 2222222222222222222..1111111111111 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 1.1e-06
   PF07423.6  14 vvLniaiaiVvvlivivaaqllvgnskskkasadeeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkeee 105
                 v ++ aia ++v+ v v a +l  +    +  +d  e+ek++++ek+ +e+  + eke+ + e++++d+e +k +e+s ++ee+++ ++e e
  MMETSP1325-20131115|8018_1 207 VTVTGAIATATVTAVAVLARVLARDRALARXDRD-AEKEKEKEKEKEADEKGSDGEKEKRDAEEEHEDKETDKPKENSAAAEEDDDGSDEGE 297
                 5677899999999999999999955554444444.555555555555555555555566655555555666776666666665555444434 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   1.5    0.0025         2     217     257 ..      67     107 ..      38     125 .. 0.45
   2 !   15.1   7.4     1e-05    0.0082     113     197 ..     200     294 ..     182     302 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0025
   PF09073.5 217 deesgeeqdesddeeesesesesdeedeedsdsrsvsdsee 257
                 +++ g+e++ ++++ e++ e ++de+++ed d+r +s+ ++
  MMETSP1325-20131115|8018_1  67 GDDAGKEKEGVEKDLEKMGEGDEDEDEDEDEDDRRRSKKSK 107
                 22222222222333333333333333333222222222221 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 1e-05
   PF09073.5 113 lnnvvsrllnskqvknvlekieeslkkllgiekkaekekkkkkkkkkkkkkedesedkdeeessesedssddeeseed..........dsdsdee 197
                  + v++ ++ + ++++++   ++ l  +l ++   ++ +++++k+k+k+k+++++e+ ++ e+++ + ++++e++e d          ++d+ ++
  MMETSP1325-20131115|8018_1 200 TATVTATVTVTGAIATATVTAVAVLARVLARDRALARXDRDAEKEKEKEKEKEADEKGSDGEKEKRDAEEEHEDKETDkpkensaaaeEDDDGSD 294
                 55666666666666666666666666666666666666666666666666655544444444444444444444444422111111102222222 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-05     0.009      22     123 ..     189     283 ..     186     292 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.1e-05
   PF04156.9  22 GiallvlfasslgvlisallgivliAlgvvLlalgllllllkapvqseedekieesrlqeelsesesqlseleeeleqleerlaeleseledleedlellqe 123
                 + a+ + +a+++  + ++  ++++iA + v  +++l+ +l++ + + + d++        e+ ++++  +e++e+ ++ e++  + e+e ed e d+ ++++
  MMETSP1325-20131115|8018_1 189 MTATAIGTATATATVTATVTVTGAIATATVTAVAVLARVLARDRALARXDRDA-------EKEKEKEKEKEADEKGSDGEKEKRDAEEEHEDKETDKPKENS 283
                 445588888889999*****************************999999764.......889999999*********999999999999999999988873 PP

>> PF03064.11  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   1.7    0.0077       6.2     148     187 ..      72     111 ..      46     124 .. 0.62
   2 !   15.4   3.7   1.1e-05    0.0088     127     213 ..     218     302 ..     147     303 .] 0.75

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0077
  PF03064.11 148 evaekvcralsrkksdderkkksakqkekRrdedskkkke 187
                 +  e v + l++ +++de + + ++++++Rr++ skk  +
  MMETSP1325-20131115|8018_1  72 KEKEGVEKDLEKMGEGDEDEDEDEDEDDRRRSKKSKKAAD 111
                 3333334444555556666666677777777775555444 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 1.1e-05
  PF03064.11 127 vtlskkaheaeikdvgdvklaevaekvcralsrkksdderkkksakqkekRrdeds.kkkkedrkkkqeekrtsdedkrsgkgdesGs 213
                 vt + +  +  ++d +  +  + aek++   ++ k+ ++ +k+s  +kekR  e+  + k+ d+ k+++ + ++d+d++ +++d +Gs
  MMETSP1325-20131115|8018_1 218 VTAVAVLARVLARDRALARXDRDAEKEK---EKEKEKEADEKGSDGEKEKRDAEEEhEDKETDKPKENSAAAEEDDDGSDEGEDFGGS 302
                 5555555555566666666677777777...677777888889999999999887745566666677777788888888888887766 PP

>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2    0.0025         2     221     259 ..      73     111 ..      53     179 .. 0.62
   2 ?    9.7   8.4   0.00028      0.22     164     216 ..     240     291 ..     213     300 .. 0.44

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0025
   PF10243.4 221 keedkgkdretnrakeeeeesrksseksrrssksekkae 259
                 ++e  +kd e+  +  e+e +++++  +rrs+ks+k a+
  MMETSP1325-20131115|8018_1  73 EKEGVEKDLEKMGEGDEDEDEDEDEDDRRRSKKSKKAAD 111
                 222223333333222223333344444444444444333 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00028
   PF10243.4 164 ekekererkkaserekkekkkdsknkkkdk.ekekkkeksrksekgkeeerskd 216
                 + eke+e++k++e+   ek +d +++k+d+ e++++ke+++++e++ ++e+++d
  MMETSP1325-20131115|8018_1 240 DAEKEKEKEKEKEA--DEKGSDGEKEKRDAeEEHEDKETDKPKENSAAAEEDDD 291
                 11111111111111..11222223333333333333333333333333333333 PP

>> PF12794.2  Mechanosensitive ion channel inner membrane domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.2    0.0003      0.24     238     291 ..     208     268 ..     185     281 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0003
   PF12794.2 238 llwllvynlikRwlliarRrLayerakekraeilaqre.eeeeedsse.......gaaeeie 291
                 +++  +  +   ++ + +R La +ra+++ ++ ++ +e e+e+e++++        +  + e
  MMETSP1325-20131115|8018_1 208 TVTGAIATATVTAVAVLARVLARDRALARXDRDAE-KEkEKEKEKEADekgsdgeKEKRDAE 268
                 55555555666678999************998443.33355543333323333332223333 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.15   1.2e+02     154     173 ..      88     107 ..      21     171 .. 0.65
   2 ?    8.0   2.0    0.0025         2     122     174 ..     227     278 ..     179     292 .. 0.47

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.15
  PF02862.12 154 kkkeseeetkeeeeeakkek 173
                  ++e+e+e ++ ++++kk+k
  MMETSP1325-20131115|8018_1  88 DEDEDEDEDEDDRRRSKKSK 107
                 11111111111111111111 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0025
  PF02862.12 122 sl.rnsslslssedeeseeeseasklsqks....ksekkkeseeetkeeeeeakkekr 174
                  l r ++l + ++d e+e+e+e++k+++++    +  k+k+      eee+e k++++
  MMETSP1325-20131115|8018_1 227 VLaRDRALARXDRDAEKEKEKEKEKEADEKgsdgE--KEKR----DAEEEHEDKETDK 278
                 33333333333333333333333333222222111..1111....1111111111111 PP

>> PF08514.6  STAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.0     0.002       1.6      65     107 ..     215     257 ..     190     271 .. 0.88

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.002
   PF08514.6  65 tatlvalklmtaLvevakelseekettqkqleaekkkkrdnka 107
                 tat+ a+ ++  +    + l +   +++k  e+ek+k++d+k+
  MMETSP1325-20131115|8018_1 215 TATVTAVAVLARVLARDRALARXDRDAEKEKEKEKEKEADEKG 257
                 9**************************************9997 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.2    0.0005       0.4     112     154 ..      68     109 ..      64     164 .. 0.59
   2 ?    4.7  11.7     0.017        13      78     135 ..     238     295 ..     215     301 .. 0.42

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0005
   PF05285.7 112 eDeegewvdvesdeee.essDsedeeeeseeeeeeeesekkkke 154
                 +D  +e + ve+d e+  + D++++e+e+e+  ++ +s+k kk+
  MMETSP1325-20131115|8018_1  68 DDAGKEKEGVEKDLEKmGEGDEDEDEDEDED--DRRRSKKSKKA 109
                 4555666777777444333333222222222..22222222222 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.017
   PF05285.7  78 keeekkkk.eeeegleseedddeeWdvdsdeededeDeegewvdvesdeeeessDsede 135
                 + +++k+k +e+e++++e+++d+e ++ +d e+e eD+e +  +++s + ee+ D  de
  MMETSP1325-20131115|8018_1 238 DRDAEKEKeKEKEKEADEKGSDGEKEK-RDAEEEHEDKETDKPKENSAAAEEDDDGSDE 295
                 222222221222222333333333322.3333333333222222222222223333333 PP

>> PF08374.6  Protocadherin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.2       2.2   1.7e+03      91     104 ..      98     108 ..      70     128 .. 0.54
   2 ?   11.0   0.3   0.00027      0.21      37     105 ..     207     275 ..     189     298 .. 0.59

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 2.2
   PF08374.6  91 qkkkkkkkkkksdk 104
                 +    +++ kks+k
  MMETSP1325-20131115|8018_1  98 DD---RRRSKKSKK 108
                 11...112222222 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00027
   PF08374.6  37 lsiligvvaGvvavilvilvvvlvRqcrqaerkkgyqagkkeeedfvsPkqedkqkkkkkkkk.kksdks 105
                 +  + g +a + +  + +l  vl+R +  a+  + +++ k++e++  + ++   ++k+k++   ++ dk+
  MMETSP1325-20131115|8018_1 207 V-TVTGAIATATVTAVAVLARVLARDRALARXDRDAEKEKEKEKEKEADEKGSDGEKEKRDAEeEHEDKE 275
                 2.23456666666666667777788777777777788888777777666655556666666544333333 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.7     0.088        71     105     126 ..      81     103 ..      50     132 .. 0.52
   2 ?   10.9   3.2   0.00035      0.28      89     139 ..     240     286 ..     152     300 .. 0.59

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.088
   PF06459.7 105 dledgek.eekaeeeseekpeea 126
                  ++ ge  e++ e e+e++   +
  MMETSP1325-20131115|8018_1  81 LEKMGEGdEDEDEDEDEDDRRRS 103
                 11111111122222222222222 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00035
   PF06459.7  89 elkeeeeepkseaekadledgekeekaeeeseekpeeakaakkkaekkkek 139
                  +++e+e++k++   +  +dgeke++  ee    ++e+k++ k +e++++ 
  MMETSP1325-20131115|8018_1 240 DAEKEKEKEKEKEADEKGSDGEKEKRDAEE----EHEDKETDKPKENSAAA 286
                 222222222222233333444442221111....11222222222222222 PP

>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   1.4      0.24   1.9e+02      38      75 ..      71     107 ..      64     118 .. 0.49
   2 ?   11.3   1.8   0.00037       0.3      23      90 ..     223     292 ..     207     302 .. 0.47

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.24
   PF13882.1  38 vkekedakldpeeqpkkdeefeeysreedekelkresq 75 
                  keke ++ d e++ + de  +e+++e+d++  k+ s+
  MMETSP1325-20131115|8018_1  71 GKEKEGVEKDLEKMGEGDEDEDEDEDEDDRRRSKK-SK 107
                 45566666666655555544444444333333322.22 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00037
   PF13882.1  23 livclikrsrggkysvkekedakldpeeqpkkd...eefeeysreedekelkresqssedeekkkesseDs 90 
                 ++  +  r r   +  ++ e++k +++e+++++   ++ +e ++ e+e+e k++ +++e+ +   e+++D 
  MMETSP1325-20131115|8018_1 223 VLARVLARDRALARXDRDAEKEKEKEKEKEADEkgsDGEKEKRDAEEEHEDKETDKPKEN-SAAAEEDDDG 292
                 333355666666665556555555555555555322333344444444444443333333.4444444443 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   3.1     0.021        17      81     118 ..      73     111 ..      66     132 .. 0.40
   2 ?    8.4   9.0    0.0022       1.8      90     135 ..     240     288 ..     213     297 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.021
   PF08432.5  81 kqkakkekkkkkkekdkekekkkdkkd.dksekekekee 118
                 +++ +++  +k+ e d+++++++d++d   s+k+k+ ++
  MMETSP1325-20131115|8018_1  73 EKEGVEKDLEKMGEGDEDEDEDEDEDDrRRSKKSKKAAD 111
                 233333333333333333333333333122222222222 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0022
   PF08432.5  90 kkkkekdkekekkkdkkd...dksekekekeeeekaeelkkseeeaast 135
                 + +kek+kekek++d+k+   +k++ + e+e+e+k++++ k++++aa++
  MMETSP1325-20131115|8018_1 240 DAEKEKEKEKEKEADEKGsdgEKEKRDAEEEHEDKETDKPKENSAAAEE 288
                 2223333334444333331023444444444444444444444444443 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.4     0.014        11     193     245 ..      73     125 ..      36     129 .. 0.69
   2 ?    5.3   3.3     0.008       6.4     186     226 ..     239     277 ..     185     300 .. 0.42

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.014
  PF01698.11 193 qkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargk 245
                 +k+  +k+l+++ + de+e+edede++ +++ + ++       t +  var++
  MMETSP1325-20131115|8018_1  73 EKEGVEKDLEKMGEGDEDEDEDEDEDDRRRSKKSKKAADALALTHATAVARAR 125
                 33333444444444455555555555555555667777788888888888876 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.008
  PF01698.11 186 kkaskkkqkrkkkkelkseededeeeeededeegsgedgee 226
                 ++a+k+k+k+k+k+  ++ +d ++e+++ e  e++ +++++
  MMETSP1325-20131115|8018_1 239 RDAEKEKEKEKEKEADEKGSDGEKEKRDAE--EEHEDKETD 277
                 222111111111111111111111111111..111111111 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   5.3     0.017        14      44      68 ..      73     100 ..      63     131 .. 0.46
   2 ?    7.1  12.9    0.0021       1.7      29     102 ..     225     294 ..     211     302 .. 0.73

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.017
   PF10446.4  44 eae..eealeee...dededdeeddddeDe 68 
                 e+e  e++le+    deded++ed+d  D 
  MMETSP1325-20131115|8018_1  73 EKEgvEKDLEKMgegDEDEDEDEDED--DR 100
                 22222222222210022222221111..11 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0021
   PF10446.4  29 ndtlkkelairklgeeaeeealeeedededdeeddddeDeddddddddeDdedde.lddddstladaseaddGnk 102
                    l+++ a+ +  ++ae+e ++e+ e e de+ +d e e+ d ++++eD+e+d+ ++++      a+e+ddG  
  MMETSP1325-20131115|8018_1 225 ARVLARDRALARXDRDAEKEKEKEK-EKEADEKGSDGEKEKRDAEEEHEDKETDKpKENSA----AAEEDDDGSD 294
                 5678899999999999999999888.77888888888999999999999999999333333....3333344432 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.2   0.00062       0.5     252     309 ..      50     108 ..      27     114 .. 0.49
   2 ?    1.6   7.3      0.15   1.2e+02     237     303 ..     231     293 ..     212     302 .. 0.42

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00062
   PF06524.7 252 ykknlssdkygdaksvnygyesdddeee.....saedydeeededddddeeedetsenegeke 309
                 ++ n+         +++ g ++dd ++e     ++ ++  e ded+d+de+ed+   ++ +k+
  MMETSP1325-20131115|8018_1  50 FMANAKKPAL----GGGAGGGGDDAGKEkegveKDLEKMGEGDEDEDEDEDEDDRRRSKKSKK 108
                 4444333333....3444444444444410101223333455666666666666555544443 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.15
   PF06524.7 237 qtrgeesddeegygaykknlssdkygdaksvnygyesdddeeesaedydeeededddddeeedetse 303
                 ++   + d + + ++ k++   +k++d k+++  +e  d eee +ed++ ++ ++++ + eed++  
  MMETSP1325-20131115|8018_1 231 DRALARXDRDAEKEKEKEK---EKEADEKGSDGEKEKRDAEEE-HEDKETDKPKENSAAAEEDDDGS 293
                 4333444333333332222...444554444433332222222.22222222233333333333333 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.4   0.00036      0.29     157     186 ..      79     108 ..      50     140 .. 0.52
   2 ?   -0.5  12.1      0.26   2.1e+02     119     170 ..     240     293 ..     224     302 .. 0.35

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00036
   PF02724.9 157 ksesdedeeddddeededeeqrkrsnessl 186
                 k+ ++  e d+d++edede+ r+rs++s++
  MMETSP1325-20131115|8018_1  79 KDLEKMGEGDEDEDEDEDEDDRRRSKKSKK 108
                 111111222222222222222222222111 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.26
   PF02724.9 119 dayealvemkeeee.....eesdedsdseddeeeeessasekrksesdedeedddde 170
                 da ++ +++ke+e      + ++e+ d e++ e++e+++ +   ++s+ +eeddd +
  MMETSP1325-20131115|8018_1 240 DAEKEKEKEKEKEAdekgsDGEKEKRDAEEEHEDKETDKPK---ENSAAAEEDDDGS 293
                 22222222222221111112222222222222222222222...2222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1749  (0.127926); expected 273.4 (0.02)
Passed bias filter:                      503  (0.0367905); expected 273.4 (0.02)
Passed Vit filter:                       129  (0.00943534); expected 13.7 (0.001)
Passed Fwd filter:                        65  (0.00475424); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 1.24u 0.30s 00:00:01.54 Elapsed: 00:00:00.68
# Mc/sec: 1067.79
//
Query:       MMETSP1325-20131115|8021_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-06   28.1   0.0    1.4e-06   28.0   0.0    1.0  1  PF01453.19 D-mannose binding lectin
  ------ inclusion threshold ------
      0.077   12.3   0.1      0.088   12.1   0.1    1.1  1  PF13360.1  PQQ-like domain


Domain annotation for each model (and alignments):
>> PF01453.19  D-mannose binding lectin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   2.1e-10   1.4e-06      22      80 ..       2      59 ..       1      63 [. 0.88

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 2.1e-10
                EEEE-----EEEEE--....CEE-.STTSTT..EEEEEE--T--CEEE.-GGTEEEEETT CS
  PF01453.19 22 kLklqadGnLvlydnaget.vWssnvtssksskntravLqdsGnLvlrdssgavlWqSfd 80
                ++ l++dG L ++d++++  +W+s+++++++  n ra   ++G L +   +g v+W+S +
  MMETSP1325-20131115|8021_1  2 EFRLRRDGVLTVVDTDRSRiLWRSSGKAQPK-GNYRAFVDEQGVLTVEL-NGGVVWRSHE 59
                58899*********997777****9999998.89*************86.667*****75 PP

>> PF13360.1  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.3e-05     0.088       2      49 ..       8      54 ..       7      59 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.3e-05
   PF13360.1  2 egvvsaldaatGkelWrvdl.kpalgggvseavldggtlfvasakgrlv 49
                +gv++ +d++  + lWr++  ++++g+++  a++d++ +++++ +g +v
  MMETSP1325-20131115|8021_1  8 DGVLTVVDTDRSRILWRSSGkAQPKGNYR--AFVDEQGVLTVELNGGVV 54
                7999**************66444588888..999****99998888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|8019_1  [L=630]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-51  172.7   0.0    9.1e-51  172.2   0.0    1.2  1  PF00248.16 Aldo/keto reductase family
    2.2e-26   92.9   0.0    3.4e-26   92.3   0.0    1.3  1  PF02668.11 Taurine catabolism dioxygenase TauD, TfdA family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.2   0.0   1.3e-54   9.1e-51       2     282 ..     320     607 ..     319     608 .. 0.95

  Alignments for each domain:
  == domain 1    score: 172.2 bits;  conditional E-value: 1.3e-54
  PF00248.16   2 lglGtwslgndeisedealellraaleaGinlfDtAeyYgkgqseellgealkk.....srkkreeviiatKvgrispiseglsrenieesleksLkrlgtdylDllllhrpdpslp...........................sieevlealeelkkeGkirhiGvSnfsveilekakkkkkvkivvvqveynllneleeegllelcaekgvgiiaysplggGlltgkylseerkedkeprkdaqdaleelselakehgvslaqlalryalsrpavgsvipgassieqleenlkalelelseeeiaeidell 282
                 +glG+w     ++++d a++++  al++G++++D+A  Y    +e ++g+ +k+         re++++++K+     ++ ++ +e++  +++k L+ lg+dy+Dl+l+h p                                 ++e++ea+e+l + Gk r+iG+ n++ + l+ +++ ++++++v+q+e +++  l++++ll++c+e+gv+++ +splg+ ++ +  +     +++   +d  +  e + ++a++hg s+aq+ lr+ +  + + sv+p++ ++++l enl+++ + l++e+i+++++l+
  MMETSP1325-20131115|8019_1 320 VGLGLW-----KVPRDAAADTVVDALRLGYRHLDCACDY---GNEAEVGQGIKRaidegIVASREDIWVTSKL-----WNTYHAAEHVPMAMQKTLDDLGLDYVDLYLVHFPIALKFvpfeeryppewvhdpsaavprmeyarvPMQETWEAMEKLADNGKARNIGLCNVNSQGLRDLLNYARIPPAVLQIERHVY--LQQSKLLRMCHEEGVAVTGFSPLGSSSYVELDM-----ATD---SDSALDEEVVTTIAAKHGKSPAQVLLRWGV--QTGASVLPKSVKEHRLIENLDVFGFSLTDEDIQQLASLE 607
                 799999.....99**************************...99******999999988889***********.....**********************************9987789*****************************************************************************..*************************88773332.....222...223599999*********************..9*********************************99886 PP

>> PF02668.11  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   0.0     5e-30   3.4e-26      36     255 ..       2     269 ..       1     272 [. 0.77

  Alignments for each domain:
  == domain 1    score: 92.3 bits;  conditional E-value: 5e-30
                 ---EEEE---S.----TTT--------....--------SSBS--TT..-SSGGG----....--SB-S-TTSSS----EEEEEEE-------EEEB---HHHHHHH...HHHHHHHT.TEEEEEE----SS-.........................................--EEEEEESEEE----EEEE---TT....TB.............-S---S-HH....HHHHHHHHSTTT-EEE------EEEE-TTT-BB----------S-EEE CS
  PF02668.11  36 hgvvlfrglpl.speqfeelarrfgpleqsprntfygetwdvrsvka.nvkdaaytpedttralplHtDlsylesppgvqlLhclenpaeGGetlfvdgfaaynaLs...pelkella.egltyvysndgery.............e..........................eespekrhPlvrthpvtgekvlyvnplatkiqgl..........vtlaeseell....kaledhltdpeftyrhkwqeGdlvifdNrrvlHgrtafddetgeRhll 255
                 hg+vl+r++p+ ++e+f + ++ ++ l+++ +++         ++ +  v+++++ p++  +++p+H++++ + +pp+++l++c +++a GGet++  + +++++L    p     l+ +g++y+++ + ++              +                           +  +   P +  +p+t + v+++   + +++g+          v l+++ +l     +++++++   e ++++ wq++d++++dNr  +H+r  f  e  +R l 
  MMETSP1325-20131115|8019_1   2 HGAVLLRDFPVpDAEAFGRSCEGLQ-LAKTTMEGSA---APRTNMYKdIVFTSNEAPPS--EKIPFHHEMAQTANPPDYVLFFCETPAAIGGETPIILSSEVAEYLEvnhPSFASDLTaHGVKYQRTMPADDDpespigkgwrstfNveteseleqaikvsgyeswewfpngdLKTVTVAQPSLASDPRTDRTVFFNAV-VAAYVGWedarndpkksVVLGNGVALDddvmADVDRFM--TERRVAFPWQANDVLLIDNRVAMHSRNTF--ERPRRVLA 269
                 9*********98*****99999994.3222222222...11122222334444444444..46*******************************************************77*********999988877776666550566677778888889999999999986677899999*************998.55555555567777777445555555522224555555..49***************************..77777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (630 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.95u 0.33s 00:00:01.28 Elapsed: 00:00:00.61
# Mc/sec: 2474.93
//
Query:       MMETSP1325-20131115|8023_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.032   13.8   0.0      0.039   13.5   0.0    1.1  1  PF01641.13 SelR domain


Domain annotation for each model (and alignments):
>> PF01641.13  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.8e-06     0.039      97     123 ..       5      31 ..       3      32 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.8e-06
                 --EE-------.--EEE--TTTEEE-- CS
  PF01641.13  97 GhvfkdGpkektgeRyCinsaslkfvk 123
                 G  f d    ++g+RyCi++a+l f++
  MMETSP1325-20131115|8023_1   5 GKLFLDTAAFESGMRYCIDGAALTFQP 31 
                 667888888899*************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.59
# Mc/sec: 268.07
//
Query:       MMETSP1325-20131115|8022_1  [L=468]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.34s 00:00:01.05 Elapsed: 00:00:00.71
# Mc/sec: 1579.57
//
Query:       MMETSP1325-20131115|8025_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|8014_1  [L=522]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-40  137.1   0.0    7.1e-40  136.6   0.0    1.1  1  PF00069.20 Protein kinase domain
    4.7e-16   58.5   0.0    6.8e-16   58.0   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.026   14.1   0.3       0.33   10.5   0.0    2.7  4  PF01636.18 Phosphotransferase enzyme family
        0.1   11.5   0.0       0.18   10.7   0.0    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.6   0.0   2.1e-43   7.1e-40       1     255 [.     107     390 ..     107     394 .. 0.83

  Alignments for each domain:
  == domain 1    score: 136.6 bits;  conditional E-value: 2.1e-43
                 EEEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH....-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH....HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E..........EE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST..............HHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHH CS
  PF00069.20   1 yelleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.Elkilkkls....Hpnivkllevfeekdelylvleyveggdlfdllk....kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel..........kiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge..............seedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeil 255
                 y+l++ +G+G++G+Vy   + +  +  AvK++ k++  s+   ++v  El +l+ ++    Hpni+ + +v++++++ly+v+  v   d+f++++    ++  ++e ++ +++  +l++l+++H +g +HrD+K+eNiL+d + +           +++DF +++  + ++ + ++  g+  +mAPE + k+ e+ +k DvWs G+++ e+  g+  f +               +++dq+ + e +++   ++de  +s +   ++ ++k+ l+ +++ R++a +++
  MMETSP1325-20131115|8014_1 107 YRLIDSIGKGNYGQVYATAQPDG-TVKAVKRMPKSKVMSRSMLSRVCaELTLLHGIDdsqrHPNILYFDRVMQSRSYLYFVMPKVGR-DIFEFITacagERAGMDEGTALSVTMPVLSALRHIHAHGYAHRDVKSENILVDFTVDPgysapvvedvRLIDFDMCC--NVNDAQRHEGHGSLGFMAPEAMIKNVEDPRKLDVWSSGCVFLEIRMGRYWFTDYwlqpyrdnrhlrssRTRDQEMISEFTRTLAARRDEVFTSCSTLAARAIVKDALRINAEVRSNASDLI 390
                 678899**********7766655.57899*999998877665554447******9966899************************66.*********999999**************************************888889*****************8..8********************999************************8777777754444455555322222222222233333344444444449999999999999999999998876 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0     2e-19   6.8e-16       3     199 ..     109     314 ..     107     352 .. 0.84

  Alignments for each domain:
  == domain 1    score: 58.0 bits;  conditional E-value: 2e-19
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEE.CTTSBHHH.HHHHHHHHHHHHHT....-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHT..GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET..........TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE.EEHHHHHHH---HHHHHH CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl.kesaeeee.keefleeakimkkl....khpnivkllgvctkeepllivteyvkgGdLlefLrkk..ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee..........ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEif 199
                 l +++G+G++G+V+          + +  avK + k++ ++++  ++++ e+ +++ +    +hpni+ +  v+ +++ l++v+  v   d+ ef+++   e+  ++  + l++++ + +++++++++ + Hrd+ + N+L++            + v++ Df ++ ++    +  +++e++ ++ +mapE++ +++    k DvWs G++  Ei 
  MMETSP1325-20131115|8014_1 109 LIDSIGKGNYGQVYATAQP-----DGTVKAVKRMpKSKVMSRSmLSRVCAELTLLHGIddsqRHPNILYFDRVMQSRSYLYFVMPKVG-RDIFEFITACagERAGMDEGTALSVTMPVLSALRHIHAHGYAHRDVKSENILVDFtvdpgysapvVEDVRLIDFDMCCNV----NDAQRHEGHGSLGFMAPEAMIKNVeDPRKLDVWSSGCVFLEIR 314
                 5689*********976666.....55566999995555444444889999***9986543347***********99999999999775.48999999984456666777799*******************************88999999998889************....556788899999******97766637799************96 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.052   1.8e+02       5      78 ..     113     191 ..     110     197 .. 0.81
   2 ?   10.5   0.0   9.7e-05      0.33     107     196 ..     136     269 ..     129     271 .. 0.68
   3 ?   -3.6   0.0       1.9   6.4e+03     128     161 ..     328     357 ..     315     367 .. 0.48
   4 ?   -1.4   0.0      0.42   1.4e+03      25      59 ..     405     445 ..     381     460 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.052
                 EE--SSEEEEEEEETT..TEEEEEESSC..CHHHHHHHHHHHHHHHCCSSS..B--BEEE..E-CSSCSCEEEEEE--- CS
  PF01636.18   5 lsgGasnrtyrvttga.gryvlrrarpa..raaeelrrevallrlLakagi..pvPevlagdtdddvlgllfalleyvp 78 
                 ++ G++ ++y   +++ +  +++r +++   ++  l+r  a l lL++ +     P +l++d+  + + +l+++++ v 
  MMETSP1325-20131115|8014_1 113 IGKGNYGQVYATAQPDgTVKAVKRMPKSkvMSRSMLSRVCAELTLLHGIDDsqRHPNILYFDRVMQSRSYLYFVMPKVG 191
                 6789999999999999557788888888677777777888888888877778889999999999999999999999875 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 9.7e-05
                 HS--TTSHGGHCTBCTHHHHHHHHHHHHHHHHHCTHHHHHHHHHH......................................HHHHHHHHHHCSS--EEB-SS-SGGGEEEE...........TTTTEEEE---TT-B CS
  PF01636.18 107 qadpaadpladflapyltllrllesataalvasellelleeleer......................................vlaalaallpgaeppvllHgDlhpgNllvd...........pddgrvgviDfedag 196
                 ++++ + + +++l + +++l ll+   + +++++ l+  +++ ++                                       +  l al++   +++  H+D ++ N+lvd            +d r  +iDf++++
  MMETSP1325-20131115|8014_1 136 RMPKSKVMSRSMLSRVCAELTLLHGIDDSQRHPNILY--FDRVMQsrsylyfvmpkvgrdifefitacageragmdegtalsvTMPVLSALRHI-HAHGYAHRDVKSENILVDftvdpgysapvVEDVR--LIDFDMCC 269
                 5566666677777777777777777777777777777..3333333677777777777777776666666666666666666544444555553.788999************9999999987767777..89999996 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHH CS
  PF01636.18 128 llesataalvasellelleeleervlaalaallp 161
                 +++++   l+ s + + +e + e + ++laa+++
  MMETSP1325-20131115|8014_1 328 YRDNR--HLRSSRTRD-QEMISE-FTRTLAARRD 357
                 22222..223333333.333333.5555555554 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 0.42
                 EEEESSC.CHHHHHHHHHHHHHHHCCSSS.....B--BEEE CS
  PF01636.18  25 lrrarpa.raaeelrrevallrlLakagi.....pvPevla 59 
                 l+r+ pa +a++ ++++ + l l++ +g      p+ e+ a
  MMETSP1325-20131115|8014_1 405 LQRNGPAvQAHAAAEEQERALPLIHPHGGgawpsPASEPRA 445
                 67888888899999999999999998888877666666665 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   5.2e-05      0.18     129     172 ..     222     272 ..     198     281 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5.2e-05
   PF06293.9 129 rliakmhragvnHtdlnahnilldeee.......ekakvwliDldkarrrl 172
                 ++ + +h+ g +H+d    nil+d +          ++v liD+d +    
  MMETSP1325-20131115|8014_1 222 SALRHIHAHGYAHRDVKSENILVDFTVdpgysapVVEDVRLIDFDMCCNVN 272
                 567899******************98888898888899*******997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.56s 00:00:01.28 Elapsed: 00:00:00.67
# Mc/sec: 1867.01
//
Query:       MMETSP1325-20131115|8026_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 566.83
//
Query:       MMETSP1325-20131115|8024_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-23   83.0   0.0    1.5e-23   82.9   0.0    1.0  1  PF01167.13 Tub family


Domain annotation for each model (and alignments):
>> PF01167.13  Tub family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   0.0   1.1e-27   1.5e-23     156     245 ..      21     111 ..       9     112 .. 0.92

  Alignments for each domain:
  == domain 1    score: 82.9 bits;  conditional E-value: 1.1e-27
  PF01167.13 156 lleeeqkkkkesllvLknkaPrWneelqsyvLnfrGrvtvasvknfqlvaa.sepdkivlqfGkvakdvftmDyryPlsalqafaiclssf 245
                 +++  +k ++++l+v++ + P+Wn++l++++++f+Grv   s knf lv++ +++d+ +l fGkv+k+ ft+D+r P+++ qa  ++l++f
  MMETSP1325-20131115|8024_1  21 MTTLFNKGRTDELVVMETRKPKWNDKLDAWTMDFKGRVKLPSKKNFILVDHsEDEDRTLLMFGKVTKNRFTLDFREPFTPTQALFVALTAF 111
                 5556678899***************************************76267899********************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 543.79
//
Query:       MMETSP1325-20131115|8028_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.71   10.2   3.7       0.76   10.1   1.6    1.8  2  PF07863.6 Homologues of TraJ from Bacteroides conjugative transposon


Domain annotation for each model (and alignments):
>> PF07863.6  Homologues of TraJ from Bacteroides conjugative transposon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.6   5.6e-05      0.76      22      66 ..      65     109 ..      59     118 .. 0.91
   2 ?   -2.6   0.0      0.53   7.2e+03      42      50 ..     124     127 ..     111     138 .. 0.49

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 5.6e-05
   PF07863.6  22 AgGggsygrkvnstakragssavtgskagagvagaalGnvagrlk 66 
                  gG+ ++ r++ ++ +ra  +++  s+ ++++ g a  n+++r++
  MMETSP1325-20131115|8028_1  65 SGGVKNMLRQIGQVKQRAQVQTMGSSSGVSAALGPASCNAQRRMH 109
                 4788******************9999999999999*****99996 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.53
   PF07863.6  42 savtgskag 50 
                 s+     ++
  MMETSP1325-20131115|8028_1 124 ST-----HT 127
                 22.....11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 695.41
//
Query:       MMETSP1325-20131115|8030_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|8031_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|8032_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|8033_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.55
# Mc/sec: 169.92
//
Query:       MMETSP1325-20131115|8034_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0024   17.7   7.8     0.0024   17.7   5.4    3.4  3  PF13863.1  Domain of unknown function (DUF4200)
     0.0071   15.8   1.7      0.014   14.8   0.5    1.8  2  PF03887.9  YfbU domain
  ------ inclusion threshold ------
      0.056   12.0   0.8      0.057   12.0   0.6    1.2  1  PF02155.10 Glucocorticoid receptor
      0.089   12.2   0.9       0.14   11.6   0.1    1.7  2  PF02572.10 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
       0.17   10.8   5.4       0.11   11.4   2.6    1.6  1  PF13990.1  YjcZ-like protein
        0.2   11.4   2.0       0.35   10.6   0.3    2.1  2  PF06103.6  Bacterial protein of unknown function (DUF948)
        0.4   10.4  10.9       0.93    9.2   1.0    3.4  2  PF14131.1  Domain of unknown function (DUF4298)
        0.6    9.7   8.8        3.8    7.2   0.1    2.8  3  PF03909.12 BSD domain
        4.3    7.2  10.3         31    4.5   6.3    2.5  2  PF14071.1  Putative coat protein


Domain annotation for each model (and alignments):
>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   5.4   1.6e-06    0.0024      73     120 ..       1      48 [.       1      58 [. 0.91
   2 ?   -2.3   7.7       2.4   3.6e+03      55     106 ..      66     118 ..      51     133 .. 0.46
   3 ?    3.4   0.2     0.042        63      33      77 ..     140     184 ..     127     192 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.6e-06
   PF13863.1  73 kkekkekeeeikklkaqleelkaeiekleekleeyqkYeefLekvvea 120
                 +k++++ke+ei +lk++  +   e+++l+++l+  +kY+ +L +vve 
  MMETSP1325-20131115|8034_1   1 RKQREQKEAEIVRLKEEHRKRLDEEKALKRELQLNEKYQLYLTNVVEG 48 
                 589******************************************984 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 2.4
   PF13863.1  55 lkdneakreraekkaeee.kkekkekeeeikklkaqleelkaeiekleeklee 106
                 lkd ++   +a++k e++ + ++ e  +  k+ ++++ + +++i+kl++kle 
  MMETSP1325-20131115|8034_1  66 LKDINQDLADAQRKHEQDnEDKRLEFANFKKERQNEMLNQNNDIAKLQKKLEG 118
                 33333333333333332202333344444444444444444444444444443 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.042
   PF13863.1  33 reeelekkqeelqeslikfnkflkdneakreraekkaeeekkekk 77 
                 +  el +  +  q  l++f+k + ++++ ++++ ++ae++++  k
  MMETSP1325-20131115|8034_1 140 KTLELGQILRSVQNLLERFEKQVHSHAKHKQDHPRRAEKATSGGK 184
                 566777788888889999999999999999999999999886555 PP

>> PF03887.9  YfbU domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.84   1.3e+03     117     147 ..      16      47 ..      11      54 .. 0.65
   2 !   14.8   0.5     9e-06     0.014      59     108 ..      53     105 ..      43     135 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.84
   PF03887.9 117 gkyqkfdkeekrfnsqsemlekYrrmL.dvWr 147
                  +++k   eek    + ++ ekY+  L +v  
  MMETSP1325-20131115|8034_1  16 EEHRKRLDEEKALKRELQLNEKYQLYLtNVVE 47 
                 55667777888888888888888887744444 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 9e-06
   PF03887.9  59 CklvlDilemyralkssvsdldd...qikkavaerrlsflGfdaaleakllgY 108
                  +++ D+l  y+ lk  ++dl d   + +++++++rl+f+ f  ++ + +l+ 
  MMETSP1325-20131115|8034_1  53 YHEIQDLLSRYKSLKDINQDLADaqrKHEQDNEDKRLEFANFKKERQNEMLNQ 105
                 57899******************7666678999*****************996 PP

>> PF02155.10  Glucocorticoid receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.6   3.7e-05     0.057      99     169 ..      64     132 ..      24     205 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.7e-05
  PF02155.10  99 esiAdLnrssssadsllgavsPedlevlktedvsaedkdsldlqsgsnGqstkkldvtdqstlDlLqDlel 169
                 +s+ d+n+  + a++  ++   ++ + l+ +++  e ++++  q++   + +kkl+  +++t+ lL D++ 
  MMETSP1325-20131115|8034_1  64 KSLKDINQDLADAQRKHEQ--DNEDKRLEFANFKKERQNEMLNQNNDIAKLQKKLEGHERETMGLLNDVDS 132
                 4666777766666666666..5677889999*************************************985 PP

>> PF02572.10  ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.5   2.3e+03      77      77 ..      83      83 ..      48     123 .. 0.56
   2 ?   11.6   0.1   9.2e-05      0.14      59     114 ..     157     213 ..     134     229 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 1.5
  PF02572.10 77 d 77
                d
  MMETSP1325-20131115|8034_1 83 D 83
                0 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 9.2e-05
  PF02572.10  59 elekmgegftwetqdreedaaaaeeawekakellaseeydlvvLDEln.yalklgll 114
                 ++ek  +   +++qd+++ a++a ++ + a+e+ ++++  ++ LDE++ y+l+++ +
  MMETSP1325-20131115|8034_1 157 RFEKQVHSHAKHKQDHPRRAEKATSGGKSAEEIESDGNNAVLSLDEICmYMLDYKDI 213
                 4555566677788899999****************************7367777544 PP

>> PF13990.1  YjcZ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.6   7.6e-05      0.11      31     133 ..      91     189 ..      66     209 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.6e-05
   PF13990.1  31 llgksalrqnavngvlaegleaaLellekLtssldpghlAltrvnqklaelqqdeadlakasaelkqqlealaeqvekrlaalekaLtrvdllvraqehleqi 133
                 ++  ++   +  n++l+++  +a +l +kL ++   +   l+ v  ++   + ++ +l+++  ++++ le  ++qv+ ++++++++ +r +  + +++ +e+i
  MMETSP1325-20131115|8034_1  91 FANFKK---ERQNEMLNQNNDIA-KLQKKLEGHERETMGLLNDVDSTIRGTSDKTLELGQILRSVQNLLERFEKQVHSHAKHKQDHPRRAEKATSGGKSAEEI 189
                 444444...44467788877766.8889****************************************************************99999999998 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.4   2.1e+03      48      66 ..      55      72 ..      53      81 .. 0.62
   2 ?   10.6   0.3   0.00023      0.35      23      82 ..      97     156 ..      90     165 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 1.4
   PF06103.6 48 eteellaktnelleDvneK 66
                e+++ll++ ++l +D+n+ 
  MMETSP1325-20131115|8034_1 55 EIQDLLSRYKSL-KDINQD 72
                666677666665.456654 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00023
   PF06103.6  23 klkktldevnktvkkltkqvdgitketeellaktnelleDvneKvetldpvfqavadlge 82 
                 + ++ + + n+ ++kl+k+++g  +et  ll+  +++    ++K+ +l ++ ++v++l e
  MMETSP1325-20131115|8034_1  97 ERQNEMLNQNNDIAKLQKKLEGHERETMGLLNDVDSTIRGTSDKTLELGQILRSVQNLLE 156
                 455667778999******************************************999865 PP

>> PF14131.1  Domain of unknown function (DUF4298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   1.6     0.044        66       2      50 ..      56     105 ..      55     119 .. 0.72
   2 ?    9.2   1.0   0.00061      0.93      54      87 ..     186     219 ..     140     222 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.044
   PF14131.1   2 ieemeeiynelselleeleealeklkeaqedyr.eLeayYgseewmedle 50 
                 i+ + ++y++l++++++l++a++k +++ ed r e+ ++ ++++   +++
  MMETSP1325-20131115|8034_1  56 IQDLLSRYKSLKDINQDLADAQRKHEQDNEDKRlEFANFKKERQNEMLNQ 105
                 7888899******************9998876536777764444444444 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00061
   PF14131.1  54 kgeiptelkygvLSEDalynllgehyelakelle 87 
                  +ei+++++ +vLS D++   + + ++++ e+le
  MMETSP1325-20131115|8034_1 186 AEEIESDGNNAVLSLDEICMYMLDYKDIVDEWLE 219
                 459*****************************98 PP

>> PF03909.12  BSD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0025       3.8      13      34 ..      52      73 ..      35      82 .. 0.90
   2 ?    6.4   1.3    0.0043       6.5       4      34 ..      87     116 ..      82     116 .. 0.77
   3 ?   -2.6   0.0       2.8   4.3e+03      19      40 ..     146     167 ..     139     170 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0025
  PF03909.12 13 daeeiqalLkedpeLrklryel 34
                d+ eiq lL+ +++L+ + ++l
  MMETSP1325-20131115|8034_1 52 DYHEIQDLLSRYKSLKDINQDL 73
                7889*************99887 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0043
  PF03909.12   4 edqkf.kadedaeeiqalLkedpeLrklryel 34 
                  + +f ++  ++e ++++L+++ +++kl ++l
  MMETSP1325-20131115|8034_1  87 KRLEFaNF--KKERQNEMLNQNNDIAKLQKKL 116
                 34455555..****************998775 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 2.8
  PF03909.12  19 alLkedpeLrklryelVPskms 40 
                 ++L+   +L   +++ V s+ +
  MMETSP1325-20131115|8034_1 146 QILRSVQNLLERFEKQVHSHAK 167
                 5788888888777777766655 PP

>> PF14071.1  Putative coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.4      0.58   8.9e+02      95     108 ..      55      68 ..       2      91 .. 0.50
   2 ?    4.5   6.3      0.02        31      67     118 ..     120     173 ..      29     178 .. 0.72

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.58
   PF14071.1  95 svqellqqfqeeke 108
                  +q+ll+++++ k+
  MMETSP1325-20131115|8034_1  55 EIQDLLSRYKSLKD 68 
                 33333333333322 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.02
   PF14071.1  67 leklvelvkkld..vnelqehlnklsqaissvqellqqfqeekekksekkeenP 118
                   + + l++ +d  +   +++  +l q++ svq+ll++f+++ ++++++k+++P
  MMETSP1325-20131115|8034_1 120 ERETMGLLNDVDstIRGTSDKTLELGQILRSVQNLLERFEKQVHSHAKHKQDHP 173
                 33334444444411234455666799********************999**999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1625  (0.118856); expected 273.4 (0.02)
Passed bias filter:                      531  (0.0388385); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.80u 0.41s 00:00:01.21 Elapsed: 00:00:00.56
# Mc/sec: 1004.79
//
Query:       MMETSP1325-20131115|8037_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-12   44.6   0.1    9.8e-12   44.4   0.1    1.0  1  PF00520.26 Ion transport protein
  ------ inclusion threshold ------
      0.032   13.6   0.5      0.038   13.4   0.4    1.1  1  PF06139.7  BphX-like


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.1   1.4e-15   9.8e-12      62     127 ..       7      72 ..       2      80 .. 0.93

  Alignments for each domain:
  == domain 1    score: 44.4 bits;  conditional E-value: 1.4e-15
                 XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----T CS
  PF00520.26  62 avlrllrvlRllrllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcv 127
                 +vl ++  lR+lrl++rie++ t + s+i++v +l  ++ +++++  ++a++g+qlf+g++  +++
  MMETSP1325-20131115|8037_1   7 KVLVIILSLRPLRLVNRIETIHTTIASIIHTVYSLSSLVAIIALLKAMYAVVGLQLFMGQFGYCDD 72 
                 57889999*****************************************************99976 PP

>> PF06139.7  BphX-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.4   5.6e-06     0.038      14      61 ..      18      62 ..       5      69 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 5.6e-06
   PF06139.7 14 fyllnlvgtlpfsslgllelmypgvelevgapvfkllqdaWlvvGlql 61
                  l+n + t++++++++++++y+   l+    +  ll+  ++vvGlql
  MMETSP1325-20131115|8037_1 18 LRLVNRIETIHTTIASIIHTVYS---LSSLVAIIALLKAMYAVVGLQL 62
                56899999999999999999997...556678999************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       740  (0.0541252); expected 273.4 (0.02)
Passed bias filter:                      547  (0.0400088); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 380.60
//
Query:       MMETSP1325-20131115|8036_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 525.52
//
Query:       MMETSP1325-20131115|8039_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-06   27.8   1.8    1.7e-06   27.8   1.3    2.1  2  PF00090.14 Thrombospondin type 1 domain


Domain annotation for each model (and alignments):
>> PF00090.14  Thrombospondin type 1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   1.3   1.3e-10   1.7e-06       4      27 ..      25      48 ..      23      58 .. 0.86
   2 ?    1.3   0.1     0.026   3.5e+02      40      49 .]     100     109 ..      79     109 .. 0.76

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 1.3e-10
                ------S-SS----EEEE--CECC CS
  PF00090.14  4 seWspCSvTCgkGirvRqrtcksn 27
                seWspCS  Cg G r+Rq +c+  
  MMETSP1325-20131115|8039_1 25 SEWSPCSRRCGGGERTRQVRCARF 48
                8********************965 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.026
                 EEE------- CS
  PF00090.14  40 eteaCkmqkC 49 
                  ++aC+  +C
  MMETSP1325-20131115|8039_1 100 SVQACSLTPC 109
                 3899999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.29s 00:00:00.67 Elapsed: 00:00:00.62
# Mc/sec: 575.90
//
Query:       MMETSP1325-20131115|8035_1  [L=614]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.09u 0.41s 00:00:01.50 Elapsed: 00:00:00.81
# Mc/sec: 1816.50
//
Query:       MMETSP1325-20131115|8038_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-21   75.4   0.0    5.1e-21   74.2   0.0    1.7  1  PF00271.26 Helicase conserved C-terminal domain
    1.8e-12   46.9   0.0    8.7e-12   44.7   0.0    1.9  2  PF00270.24 DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.025   14.2   0.0      0.031   13.9   0.0    1.2  1  PF12695.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.2   0.0   1.1e-24   5.1e-21       3      78 .]     133     208 ..     131     208 .. 0.97

  Alignments for each domain:
  == domain 1    score: 74.2 bits;  conditional E-value: 1.1e-24
                 HHH----EEEE-TTS-HHHHHHHHHHHHTTTSSEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26   3 lekkgikvailhgelpqnereeileqfnagkskvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78 
                 l + g++++ lhg+  q +re+++ +++++ s  +vat+va+rG+d+ ++ +Vin+++p   ++y++r+GRtgRag
  MMETSP1325-20131115|8038_1 133 LMRSGYPCLSLHGGKDQHDREQTIADYKNKVSTLMVATSVAGRGLDVAELCCVINYSCPNHLEDYVHRVGRTGRAG 208
                 7889**********************************************************************97 PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0   1.9e-15   8.7e-12     114     172 ..       6      63 ..       2      64 .. 0.88
   2 ?   -0.9   0.0      0.18   8.3e+02      74     101 ..     132     164 ..     113     179 .. 0.60

  Alignments for each domain:
  == domain 1    score: 44.7 bits;  conditional E-value: 1.9e-15
                 HHHCCH.HTTTEEEEEECTHHHHHCTTTHHHHHHHHHHSHHTTTSEEEEEESS-THHHHH CS
                 xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00270.24 114 vstgkl.nlsqvrllVlDEadrllsqgfsdqlnqilqilcdgkrlqvivlSATlpkdvkk 172
                 +++gkl +l +++++V+DEadr+ ++gf++q++ il+ ++   ++q++++SAT+p +v+ 
  MMETSP1325-20131115|8038_1   6 MQAGKLiSLARCSFVVMDEADRMFDMGFEPQIQMILRNIR--PDRQTCLFSATFPAKVES 63 
                 45689999999***************************94..459**********88876 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.18
                 T...SS.EEEEETTSSBHHHHHHHHH...T..-S CS
                 x...xxxxxxxxxxxxxxxxxxxxxx...xxxxx RF
  PF00270.24  74 y...pklrvlliiggvalardqlsvl...dngvd 101
                      +  +l ++gg+++  d+++ +   +n+v 
  MMETSP1325-20131115|8038_1 132 DlmrSGYPCLSLHGGKDQH-DREQTIadyKNKVS 164
                 3333456778888888855.44444445644443 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   6.8e-06     0.031      47     126 ..      66     162 ..      15     178 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 6.8e-06
   PF12695.2  47 krvlaadlldleriilvGhSlGGgvalelag....rddrvkglvllap.f...............pd..gedlakltlpvllihGtrDgvvppeeaeklaka 126
                 krvl +    + +i+++G+S   ++++++a+    + d++  l  l + +               +d   edl + + p+l++hG +D+    + +++  ++
  MMETSP1325-20131115|8038_1  66 KRVL-K---APIEIVVGGRSVANSAITQYAEvreeE-DKFMRLLQLLGvWyerghvlvftdtqqrCDrvFEDLMRSGYPCLSLHGGKDQHDREQTIADYKNK 162
                 3333.2...5569******************77651.44444433333223444456666655663324589999999**********98877776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.34s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1035.23
//
Query:       MMETSP1325-20131115|8040_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-14   52.1   0.2    4.8e-14   51.7   0.1    1.2  1  PF00226.26 DnaJ domain
  ------ inclusion threshold ------
      0.058   12.3   0.0      0.073   12.0   0.0    1.1  1  PF13447.1  Seven times multi-haem cytochrome CxxCH


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.1   7.1e-18   4.8e-14       2      56 ..      18      80 ..      17      88 .. 0.91

  Alignments for each domain:
  == domain 1    score: 51.7 bits;  conditional E-value: 7.1e-18
                HHHHTT--T.......T--HHHHHHHHHHHHHHT-TTT--SCC.HHHHHHHHHHHHHHHHHTS CS
  PF00226.26  2 yYeiLgvpk.......dasdeeIkkaYrklalkyHPDknkdde.eeaeekfkeineAyevLsd 56
                yYe L+ ++       + s ++I+kaYrk +lk+HPDk+++d+  e++e+f +++eA+e+L  
  MMETSP1325-20131115|8040_1 18 YYETLNFDPekikggdSPSIKDIQKAYRKACLKCHPDKFPHDKfPEKAEMFDKVQEAFEILVS 80
                89999999999999988999************************8899************965 PP

>> PF13447.1  Seven times multi-haem cytochrome CxxCH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.1e-05     0.073     194     255 ..      26      83 ..      16      92 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.1e-05
   PF13447.1 194 keiadklekewsekrkeswvklCskCHsesFakdeleaadkatkeslavvkEAkkvvedlye 255
                 +e+ ++ +++  ++ ++++ k C kCH ++F +d++ +      e +++v+EA ++++ ++e
  MMETSP1325-20131115|8040_1  26 PEKIKGGDSPSIKDIQKAYRKACLKCHPDKFPHDKFPEK----AEMFDKVQEAFEILVSVKE 83 
                 56667777777788889999***************9864....4678999999999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      390  (0.0285255); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 688.32
//
Query:       MMETSP1325-20131115|8041_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 733.00
//
Query:       MMETSP1325-20131115|8044_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|8045_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 295.72
//
Query:       MMETSP1325-20131115|8046_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.31s 00:00:00.61 Elapsed: 00:00:00.44
# Mc/sec: 462.93
//
Query:       MMETSP1325-20131115|8042_1  [L=549]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-22   79.6   0.1      2e-15   56.7   0.0    2.3  2  PF12796.2  Ankyrin repeats (3 copies)
    4.4e-17   61.9   0.2    5.8e-10   39.2   0.0    3.5  3  PF13637.1  Ankyrin repeats (many copies)
    8.5e-16   56.7   0.8    0.00026   20.5   0.0    4.8  5  PF00023.25 Ankyrin repeat
    2.3e-15   56.1   0.9    0.00099   19.1   0.0    4.2  4  PF13857.1  Ankyrin repeats (many copies)
    2.2e-13   48.9   0.2     0.0061   16.5   0.0    4.8  5  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0   7.4e-19     2e-15       3      81 ..     349     435 ..     347     443 .. 0.88
   2 !   21.3   0.0   7.9e-08   0.00022      25      66 ..     442     486 ..     435     501 .. 0.82

  Alignments for each domain:
  == domain 1    score: 56.7 bits;  conditional E-value: 7.4e-19
   PF12796.2   3 lAaengnlelvklLlekg..advdl......getpLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklLlek 81 
                  A++++++e v+ L+++g  + +        g++++h+A+++g++ +++lLl+ gad  a+  ++  t+LhlA+ ngh++++++L ++
  MMETSP1325-20131115|8042_1 349 KAVQRNRVERVRELIDAGevDLI-NqacnsfGRRAVHIASRNGCVPMLELLLDEGADFTARGeNDDDTCLHLAAFNGHVDVMEFLFDR 435
                 59**************9964333.2477778888**************************9999*********************986 PP

  == domain 2    score: 21.3 bits;  conditional E-value: 7.9e-08
   PF12796.2  25 l...getpLhlAaeagnleivklLleagadvnakdkegntpLhlA 66 
                 l   ge+p hlAa++g + ++  L  +g d+ akdk gntpL   
  MMETSP1325-20131115|8042_1 442 LnahGESPTHLAARRGEVGALMHLHRRGVDMFAKDKAGNTPLAQV 486
                 2447999***********************************876 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   2.5e-06    0.0068       7      45 ..     349     390 ..     344     390 .. 0.90
   2 !   39.2   0.0   2.1e-13   5.8e-10       2      53 ..     380     432 ..     380     433 .. 0.96
   3 !   11.3   0.0   0.00012      0.34       6      38 ..     451     483 ..     446     484 .. 0.94

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 2.5e-06
   PF13637.1   7 yaaisgrlelvklLlekg.id.inrt.desGntaLhiAalrg 45 
                 +a++ +r+e v+ L++ g +d in+  +++G+ a+hiA ++g
  MMETSP1325-20131115|8042_1 349 KAVQRNRVERVRELIDAGeVDlINQAcNSFGRRAVHIASRNG 390
                 6888*************889988888************9987 PP

  == domain 2    score: 39.2 bits;  conditional E-value: 2.1e-13
   PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklL 53 
                 ++a+h a + g++++++lLl+ g+d  ++  ++ +t+Lh+Aa +g++++ ++L
  MMETSP1325-20131115|8042_1 380 RRAVHIASRNGCVPMLELLLDEGADFTARgENDDDTCLHLAAFNGHVDVMEFL 432
                 5799*************************8888*******************9 PP

  == domain 3    score: 11.3 bits;  conditional E-value: 0.00012
   PF13637.1   6 hyaaisgrlelvklLlekgidinrtdesGntaL 38 
                 h aa+ g + ++++L+ +g+d  ++d+ Gnt+L
  MMETSP1325-20131115|8042_1 451 HLAARRGEVGALMHLHRRGVDMFAKDKAGNTPL 483
                 99**************99**************8 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.062   1.7e+02       9      25 ..     350     366 ..     349     368 .. 0.94
   2 !   18.4   0.0   4.3e-07    0.0012       5      31 ..     382     408 ..     378     410 .. 0.90
   3 !   20.5   0.0   9.6e-08   0.00026       1      23 [.     412     434 ..     412     441 .. 0.88
   4 !   10.2   0.0   0.00017      0.46       1      33 []     445     477 ..     445     477 .. 0.93
   5 ?   -3.3   0.1       3.3   9.1e+03       2       6 ..     479     483 ..     479     483 .. 0.94

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.062
                 HHHTTHHHHHHHHHHTT CS
  PF00023.25   9 AalrgnlevvklLlsqG 25 
                 A++r+++e v+ L+++G
  MMETSP1325-20131115|8042_1 350 AVQRNRVERVRELIDAG 366
                 99*************98 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 4.3e-07
                 HHHHHHHTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25   5 PLHlAalrgnlevvklLlsqGAdlnaq 31 
                 + H+A+++g++ +++lLl+ GAd +a+
  MMETSP1325-20131115|8042_1 382 AVHIASRNGCVPMLELLLDEGADFTAR 408
                 77*********************9997 PP

  == domain 3    score: 20.5 bits;  conditional E-value: 9.6e-08
                 TSCBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLls 23 
                 d +T+LHlAa++g+++v+++L +
  MMETSP1325-20131115|8042_1 412 DDDTCLHLAAFNGHVDVMEFLFD 434
                 678*****************976 PP

  == domain 4    score: 10.2 bits;  conditional E-value: 0.00017
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 +G++P HlAa+rg +  +  L  +G d  a+d+
  MMETSP1325-20131115|8042_1 445 HGESPTHLAARRGEVGALMHLHRRGVDMFAKDK 477
                 699***********9999999999999999986 PP

  == domain 5    score: -3.3 bits;  conditional E-value: 3.3
                 SCBHH CS
  PF00023.25   2 GfTPL 6  
                 G+TPL
  MMETSP1325-20131115|8042_1 479 GNTPL 483
                 9***9 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.07   1.9e+02      21      56 .]     348     386 ..     331     386 .. 0.72
   2 !   19.1   0.0   3.6e-07   0.00099      14      47 ..     377     410 ..     362     413 .. 0.82
   3 !   17.8   0.1   9.6e-07    0.0026      10      43 ..     411     441 ..     407     445 .. 0.80
   4 !   16.6   0.0   2.3e-06    0.0062      11      53 ..     441     483 ..     434     485 .. 0.92

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.07
   PF13857.1  21 hlAakggalevvrlLl.apgadl..nlrdsdgltaldlA 56 
                  +A+ ++++e vr+L+ a ++dl   +++s+g++a+++A
  MMETSP1325-20131115|8042_1 348 LKAVQRNRVERVRELIdAGEVDLinQACNSFGRRAVHIA 386
                 578888999999999976666652257888888888887 PP

  == domain 2    score: 19.1 bits;  conditional E-value: 3.6e-07
   PF13857.1  14 eggntpLhlAakggalevvrlLlapgadlnlrds 47 
                  +g+ + h+A ++g++++++lLl+ gad ++r +
  MMETSP1325-20131115|8042_1 377 SFGRRAVHIASRNGCVPMLELLLDEGADFTARGE 410
                 45669************************99976 PP

  == domain 3    score: 17.8 bits;  conditional E-value: 9.6e-07
   PF13857.1  10 natdeggntpLhlAakggalevvrlLl.apgadln 43 
                 n+ d    t LhlAa +g+++v+++L+ +++ d +
  MMETSP1325-20131115|8042_1 411 NDDD----TCLHLAAFNGHVDVMEFLFdRARLDVT 441
                 3344....*******************77777665 PP

  == domain 4    score: 16.6 bits;  conditional E-value: 2.3e-06
   PF13857.1  11 atdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53 
                 +++ +g++p hlAa++g + ++  L+++g+d  ++d+ g+t+l
  MMETSP1325-20131115|8042_1 441 TLNAHGESPTHLAARRGEVGALMHLHRRGVDMFAKDKAGNTPL 483
                 6788999***********************************8 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.047   1.3e+02       6      27 ..     347     369 ..     341     373 .. 0.83
   2 !   15.9   0.0   3.6e-06    0.0098       2      28 ..     379     405 ..     378     407 .. 0.93
   3 !   16.5   0.0   2.2e-06    0.0061       3      27 ..     414     439 ..     412     443 .. 0.84
   4 !    7.2   0.0    0.0023       6.3       1      27 [.     445     471 ..     445     474 .. 0.91
   5 ?   -3.4   0.0         5   1.4e+04       2       6 ..     479     483 ..     478     489 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.047
   PF13606.1   6 LhlAasngrielveaLleng.ad 27 
                 +  A++++r+e v++L+++g +d
  MMETSP1325-20131115|8042_1 347 FLKAVQRNRVERVRELIDAGeVD 369
                 6789**************99566 PP

  == domain 2    score: 15.9 bits;  conditional E-value: 3.6e-06
   PF13606.1   2 GnTpLhlAasngrielveaLlengadi 28 
                 G+ + h+A +ng++ ++e+Ll+ gad+
  MMETSP1325-20131115|8042_1 379 GRRAVHIASRNGCVPMLELLLDEGADF 405
                 8999*********************97 PP

  == domain 3    score: 16.5 bits;  conditional E-value: 2.2e-06
   PF13606.1   3 nTpLhlAasngrielveaLlen.gad 27 
                 +T+LhlAa ng+++++e+L ++ + d
  MMETSP1325-20131115|8042_1 414 DTCLHLAAFNGHVDVMEFLFDRaRLD 439
                 7******************9863555 PP

  == domain 4    score: 7.2 bits;  conditional E-value: 0.0023
   PF13606.1   1 nGnTpLhlAasngrielveaLlengad 27 
                 +G++p hlAa++g + ++ +L ++g+d
  MMETSP1325-20131115|8042_1 445 HGESPTHLAARRGEVGALMHLHRRGVD 471
                 699**********99999999999887 PP

  == domain 5    score: -3.4 bits;  conditional E-value: 5
   PF13606.1   2 GnTpL 6  
                 GnTpL
  MMETSP1325-20131115|8042_1 479 GNTPL 483
                 9***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.86u 0.33s 00:00:01.19 Elapsed: 00:00:00.49
# Mc/sec: 2684.90
//
Query:       MMETSP1325-20131115|8048_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00027   20.0   0.0    0.00027   20.0   0.0    1.1  1  PF10250.4 GDP-fucose protein O-fucosyltransferase


Domain annotation for each model (and alignments):
>> PF10250.4  GDP-fucose protein O-fucosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0     2e-08   0.00027     306     348 ..       9      51 ..       1      76 [. 0.88

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2e-08
   PF10250.4 306 dselaaldqiicaeadvFigtygstfsarvkreRrllgkgkrk 348
                  ++   ++qi+ ++ + F gt +stfsa + r R ++g+ +++
  MMETSP1325-20131115|8048_1   9 PNQYGMIEQIVASQGRTFTGTWFSTFSAYICRLRAYYGFADHT 51 
                 388899********************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 474.75
//
Query:       MMETSP1325-20131115|8047_1  [L=486]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.0   1.0       0.44    9.9   0.7    2.2  1  PF10708.4 Protein of unknown function (DUF2510)


Domain annotation for each model (and alignments):
>> PF10708.4  Protein of unknown function (DUF2510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.7   3.2e-05      0.44      10      19 ..     381     390 ..     375     391 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 3.2e-05
   PF10708.4  10 psqlRwWDGt 19 
                 p+ lRwWDGt
  MMETSP1325-20131115|8047_1 381 PRVLRWWDGT 390
                 889******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       922  (0.0674371); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.33s 00:00:01.21 Elapsed: 00:00:00.56
# Mc/sec: 2043.21
//
Query:       MMETSP1325-20131115|8043_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.57
# Mc/sec: 1111.41
//
Query:       MMETSP1325-20131115|8049_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-22   79.2   0.1    2.4e-22   78.3   0.0    1.5  1  PF11919.3  Domain of unknown function (DUF3437)
  ------ inclusion threshold ------
      0.063   12.3   0.4      0.092   11.8   0.3    1.2  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)
      0.097   12.7   3.0         24    5.2   0.0    4.2  4  PF02985.17 HEAT repeat
       0.58   10.6   6.7         37    4.9   0.6    3.7  3  PF13513.1  HEAT-like repeat


Domain annotation for each model (and alignments):
>> PF11919.3  Domain of unknown function (DUF3437)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.0     7e-26   2.4e-22       4      89 ..     210     295 ..     207     296 .] 0.96

  Alignments for each domain:
  == domain 1    score: 78.3 bits;  conditional E-value: 7e-26
   PF11919.3   4 aklhgavlgLsAlvlafPyevPkwlpsllteLarhardpapikktvkktlaeFkrthqDtWsedkekFtedelevledtllapsYf 89 
                 + + ++v +LsAlvlafPy+vP+ lp  ++ Larh++ +      v++t+ +Fkrth+D W+ ++e F++++l++ +d +++p Yf
  MMETSP1325-20131115|8049_1 210 RARITSVQALSALVLAFPYDVPPALPPAIALLARHSALSPAADAIVRHTFTDFKRTHADLWERQRELFQREQLDAFNDIMVSPDYF 295
                 567899*******************************99999*******************************************9 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   2.7e-05     0.092     205     278 ..     114     206 ..      87     220 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.7e-05
                 THHHHHXXXGGGSXGGGGTXXXXXXXXXX.....XXXXXXX.....X................XXXXXXXXXXXXXXXXXXXX..XXXXXXXXX CS
   PF09468.5 205 lrlrtAidllksslpkealkellkellks....vdFaplekylaela................sdlskkreaeedaeaaesraekkrkkeeeek 278
                 ++ r A++l+ +   +e++k l+ + +++      +a+ +k++a+ a                +++s++++a+   ++ae +a  k+ ke +ek
  MMETSP1325-20131115|8049_1 114 DCARSAMGLIITAADDEHVKRLVSSFMEMatksLGVAKKRKRKATKAaesaavdgggptgtnvEPESEEAAAARAKAEAEAKA-AKEAKERKEK 206
                 67899********************9999666644444444444444667778887666666644444444444444444444.1222211111 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0069        24       1      15 [.      14      28 ..      14      42 .. 0.87
   2 ?   -0.6   0.0      0.51   1.8e+03      10      21 ..      64      75 ..      54      76 .. 0.69
   3 ?    3.7   0.0     0.021        70       4      27 ..     100     123 ..      97     127 .. 0.86
   4 ?    0.3   0.1      0.27   9.1e+02      17      28 ..     212     223 ..     207     226 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0069
                HHHHHHHHHTSSSHH CS
  PF02985.17  1 llPlllkllnDpspe 15
                llP++ ++l+Dp+ e
  MMETSP1325-20131115|8049_1 14 LLPAIFEGLTDPDKE 28
                89**********976 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.51
                TSSSHHHHHHHH CS
  PF02985.17 10 nDpspeVReaAa 21
                ++ s+++R++ +
  MMETSP1325-20131115|8049_1 64 SSASWRIRNQLC 75
                3559****8765 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.021
                 HHHHHHTSSSHHHHHHHHHHHHHH CS
  PF02985.17   4 lllkllnDpspeVReaAaeaLgal 27 
                 l++ ll D+  eV + A +a+g +
  MMETSP1325-20131115|8049_1 100 LIIGLLGDDVREVQDCARSAMGLI 123
                 5779*************9998877 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHH CS
  PF02985.17  17 ReaAaeaLgala 28 
                 R ++++aL+al+
  MMETSP1325-20131115|8049_1 212 RITSVQALSALV 223
                 8999*****997 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.016        56      19      42 ..       8      26 ..       1      38 [. 0.75
   2 ?    2.8   0.1     0.051   1.8e+02       4      48 ..      76     116 ..      68     123 .. 0.80
   3 ?    4.9   0.6     0.011        37       4      34 ..     212     242 ..     209     257 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.016
   PF13513.1 19 prllepavpellpaLlelLedddd 42
                p l+ p++p++ + L+     d+d
  MMETSP1325-20131115|8049_1  8 PGLMVPLLPAIFEGLT-----DPD 26
                7888888899998888.....888 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.051
   PF13513.1   4 RraAawaLGrlaggeprllepavpellpaLlelLedddd.eVReaA 48 
                 R+a ++ L ++ + ++ +l+ +   ++ +L      dd  eV+++A
  MMETSP1325-20131115|8049_1  76 RFAGVMKLRQVSNMGAAHLRRLEALIIGLLG-----DDVrEVQDCA 116
                 5777778844889999999999999999999.....9999999988 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.011
   PF13513.1   4 RraAawaLGrlaggeprllepavpellpaLl 34 
                 R  +++aL++l    p +++pa+p ++++L 
  MMETSP1325-20131115|8049_1 212 RITSVQALSALVLAFPYDVPPALPPAIALLA 242
                 556677777766679999***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1156  (0.0845524); expected 273.4 (0.02)
Passed bias filter:                      632  (0.0462259); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.40s 00:00:01.10 Elapsed: 00:00:00.53
# Mc/sec: 1338.34
//
Query:       MMETSP1325-20131115|8050_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 368.67
//
Query:       MMETSP1325-20131115|8051_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-30  106.0   0.0    1.8e-30  105.9   0.0    1.0  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.9   0.0   1.3e-34   1.8e-30     104     215 .]       2     109 .]       1     109 [] 0.99

  Alignments for each domain:
  == domain 1    score: 105.9 bits;  conditional E-value: 1.3e-34
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00006.20 104 gknVlliaDslsrwaealreisgrlgempadqgypaylgaklaslyeRagkagspdriGSvtivaavspaggdfsdpvttstlgitdvfivLdkklaqrkhfPaintlvSyS 215
                 +++Vll++D++ r+++a +e+s++lg+mp+  gy+++l++++  l+eR++++    + GS+t+++av+++++d++dp + +t++++d + vL++ la+++++Pa+++l S+S
  MMETSP1325-20131115|8051_1   2 KQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERITST----NLGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 109
                 68**************************************************....******************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 483.71
//
Query:       MMETSP1325-20131115|8052_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-05   22.9  13.3     0.0031   17.2   0.8    3.6  4  PF05377.6  Flagella accessory protein C (FlaC)
     0.0012   17.3  23.6     0.0015   17.1  16.3    1.1  1  PF05701.6  Plant protein of unknown function (DUF827)
     0.0026   17.4  25.4       0.28   10.8   2.7    3.6  3  PF01920.15 Prefoldin subunit
     0.0056   16.2   0.9     0.0056   16.2   0.6    3.8  4  PF02183.13 Homeobox associated leucine zipper
  ------ inclusion threshold ------
      0.013   14.8   0.9      0.013   14.8   0.6    3.5  3  PF04977.10 Septum formation initiator
      0.033   13.5  25.4       0.34   10.2  15.2    2.5  2  PF00038.16 Intermediate filament protein
       0.05   13.3   9.8       0.15   11.8   1.3    3.1  3  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.08   12.0  24.2       0.47    9.5  10.5    2.1  2  PF13851.1  Growth-arrest specific micro-tubule binding
      0.095   12.6  23.7      0.014   15.3   9.0    2.3  2  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
       0.16   12.0  15.9      1e+02    2.9  11.0    2.2  1  PF00804.20 Syntaxin
       0.18   11.7   1.6       0.71    9.8   0.2    2.5  2  PF02186.10 TFIIE beta subunit core domain
        0.2   11.5   0.3        0.2   11.5   0.2    3.3  3  PF08654.5  DASH complex subunit Dad2
       0.21   10.0  18.3        1.5    7.2   4.2    2.0  2  PF10267.4  Predicted transmembrane and coiled-coil 2 protein
       0.26   10.4  20.6        0.5    9.4   6.6    2.6  3  PF11932.3  Protein of unknown function (DUF3450)
       0.27   11.5  13.8        0.1   12.8   5.4    2.5  3  PF09177.6  Syntaxin 6, N-terminal
       0.36    9.1  16.0       0.41    8.9  11.1    1.0  1  PF13166.1  AAA domain
       0.42   10.1  19.6        1.8    8.1   0.9    3.2  3  PF02996.12 Prefoldin subunit
       0.43    7.7  21.0       0.74    6.9  14.5    1.4  1  PF12128.3  Protein of unknown function (DUF3584)
       0.46   10.3  22.1        2.3    8.1   5.9    3.1  3  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        0.5   10.3  10.8       0.63    9.9   2.0    2.4  2  PF12443.3  AT-hook-containing transcription factor
        0.5   10.6  21.7        0.9    9.7   4.0    3.0  2  PF06156.8  Protein of unknown function (DUF972)
       0.63    9.8  26.8       0.34   10.7  11.0    2.5  2  PF13863.1  Domain of unknown function (DUF4200)
       0.66    9.1  26.7       0.25   10.5   1.5    2.2  2  PF04012.7  PspA/IM30 family
       0.71    8.8   3.7        1.5    7.8   0.4    2.0  2  PF04582.7  Reovirus sigma C capsid protein
       0.77    8.3  19.4        1.7    7.1   5.2    1.9  2  PF10498.4  Intra-flagellar transport protein 57
          1    8.9  14.6         29    4.2  10.1    2.2  1  PF01017.15 STAT protein, all-alpha domain
        1.2    9.0   8.0        2.3    8.0   1.9    2.7  2  PF10392.4  Golgi transport complex subunit 5
        1.2    9.0  10.2         13    5.7   0.3    3.4  2  PF06013.7  Proteins of 100 residues with WXG
        1.5    7.2  20.8        3.4    6.1  10.9    2.0  2  PF08317.6  Spc7 kinetochore protein
        1.5    7.0  15.0       0.31    9.3   5.2    2.0  2  PF04124.7  Dor1-like family
        1.6    6.9   9.3        1.8    6.7   6.5    1.1  1  PF04632.7  Fusaric acid resistance protein family
        1.6    8.3  25.8        5.8    6.5  12.5    2.5  2  PF07926.7  TPR/MLP1/MLP2-like protein
        1.7    7.7  12.5        2.2    7.3   8.7    1.2  1  PF00529.15 HlyD family secretion protein
        2.4    8.1  13.7        2.8    7.9   1.6    2.6  2  PF08702.5  Fibrinogen alpha/beta chain family
        2.5    8.4  12.4        1.2    9.5   0.3    3.4  3  PF11365.3  Protein of unknown function (DUF3166)
        2.6    7.8  21.9       0.86    9.4   5.6    3.2  2  PF09486.5  Bacterial type III secretion protein (HrpB7)
        2.9    7.6  26.1       0.33   10.6   2.5    3.4  3  PF12329.3  TATA element modulatory factor 1 DNA binding
        2.9    8.3   8.3         20    5.6   2.7    3.3  3  PF11273.3  Protein of unknown function (DUF3073)
          4    7.0   7.4        5.3    6.6   0.5    2.8  3  PF02662.11 Methyl-viologen-reducing hydrogenase, delta subunit
        4.4    5.8   8.7        7.3    5.1   6.0    1.4  1  PF10337.4  Protein of unknown function (DUF2422)
        5.7    5.9  16.4        7.2    5.5  11.3    1.1  1  PF02601.10 Exonuclease VII, large subunit
        6.4    6.9  20.7       0.67   10.0   1.1    3.9  4  PF08581.5  Tup N-terminal
        6.9    6.5  24.5       0.43   10.4   3.9    2.3  2  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
        7.7    6.7  16.1        5.1    7.3   1.6    3.2  3  PF03131.12 bZIP Maf transcription factor
        8.6    5.9  14.6       0.88    9.0   2.3    2.8  2  PF10224.4  Predicted coiled-coil protein (DUF2205)
        8.9    5.0  19.2         13    4.4   1.8    2.1  2  PF14362.1  Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.5     0.031       9.1       7      36 ..       7      36 ..       6      58 .. 0.79
   2 ?    0.3   0.1         2   5.9e+02      15      35 ..      50      74 ..      42      77 .. 0.67
   3 ?    6.6   0.1     0.022       6.4       3      31 ..      67      95 ..      66     102 .. 0.91
   4 !   17.2   0.8     1e-05    0.0031       7      40 ..     124     157 ..     120     159 .. 0.92

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.031
   PF05377.6  7 nklsklstvvatvrkeleelsksvekiken 36
                ++l +l t v+++++  e   ++ve+ik +
  MMETSP1325-20131115|8052_1  7 QELRQLRTIVDGLKTRAETAEETVEEIKDE 36
                567788888888888888888888888865 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 2
   PF05377.6 15 v....vatvrkeleelsksvekike 35
                +    ++++ +el+  ++++e+  e
  MMETSP1325-20131115|8052_1 50 TsqvnINGLMAELKAQKDAIEMERE 74
                3333588888888888888888555 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.022
   PF05377.6  3 deLEnklsklstvvatvrkeleelsksve 31
                d++E +  +++   +t r++++el  ++e
  MMETSP1325-20131115|8052_1 67 DAIEMERERVNFDADTWRTQMNELERELE 95
                578999999999*************9998 PP

  == domain 4    score: 17.2 bits;  conditional E-value: 1e-05
   PF05377.6   7 nklsklstvvatvrkeleelsksvekikenvkdv 40 
                   ++kl++ ++++++e++ ++++ve  ke+++d+
  MMETSP1325-20131115|8052_1 124 AAVNKLKVHLESLKRENDRMQAEVETSKESMRDM 157
                 679****************************997 PP

>> PF05701.6  Plant protein of unknown function (DUF827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1  16.3   4.9e-06    0.0015     173     327 ..       8     164 ..       4     167 .] 0.92

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 4.9e-06
   PF05701.6 173 eiiamkesleqlkaahaeaeeekikialekeqdreayekelkeaekelerlkedldpe.kdle.kLaeasaelesLqkeleeakeselesvasvtkELeeakanlekaaeeekslrslvesLkqeLeeekkeleelkekekeaeeavssLeaelsrt 327
                 e+ + +  +  lk+ ++ aee   +i+ ekeq   +y++  + ++ +++ l  +l+++ + +e + + ++   +  +++++e +++  +s+ +++ +L  a+++ e+      +++++v+ Lk  Le  k+e+++++++ +  +e + ++e  ++  
  MMETSP1325-20131115|8052_1   8 ELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQkDAIEmERERVNFDADTWRTQMNELERELEASATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQ 164
                 777788889999***************************9999999**********996678899999999999****************************************************************9999999989988877765 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   2.7   0.00093      0.28      60     100 ..      12      52 ..       9      58 .. 0.88
   2 !   10.5   0.6    0.0012      0.35      65     101 ..      60      96 ..      51     101 .. 0.90
   3 !    8.8   2.7    0.0041       1.2      60      97 ..     129     166 ..     125     167 .] 0.89

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00093
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  60 keevkeeLeerketlekeiktlekqleklekeleelkeely 100
                 + ++ + L++r+et+e+ ++++++++e+l  ++++l+++ +
  MMETSP1325-20131115|8052_1  12 LRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQ 52 
                 5677888*****************************98755 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  PF01920.15  65 eeLeerketlekeiktlekqleklekeleelkeelyk 101
                 +eL+++k+ +e e ++++   ++++++++el+ el +
  MMETSP1325-20131115|8052_1  60 AELKAQKDAIEMERERVNFDADTWRTQMNELERELEA 96 
                 79********************************987 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.0041
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15  60 keevkeeLeerketlekeiktlekqleklekeleelke 97 
                 ++   e L+ + +++++e++t +++++++e++++e+k+
  MMETSP1325-20131115|8052_1 129 LKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQKT 166
                 56667999***************************996 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       2.5   7.3e+02      26      43 ..       7      24 ..       6      26 .. 0.82
   2 ?   -0.4   0.8       2.9   8.7e+02      22      33 ..      31      42 ..      19      53 .. 0.62
   3 ?    1.0   0.1       1.1   3.2e+02      10      35 ..      62      87 ..      59     100 .. 0.57
   4 !   16.2   0.6   1.9e-05    0.0056      12      42 ..     124     154 ..     121     156 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 2.5
  PF02183.13 26 kEkekLraevlsLkeklq 43
                +E  +Lr+ v  Lk +++
  MMETSP1325-20131115|8052_1  7 QELRQLRTIVDGLKTRAE 24
                788999999999998765 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 2.9
  PF02183.13 22 dsLqkEkekLra 33
                +  + Eke+L+ 
  MMETSP1325-20131115|8052_1 31 EEIKDEKEQLLL 42
                455556666543 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 1.1
  PF02183.13 10 LKrnydaLkaendsLqkEkekLraev 35
                LK++ da+  e +++  + +  r+++
  MMETSP1325-20131115|8052_1 62 LKAQKDAIEMERERVNFDADTWRTQM 87
                45555555555555555555555555 PP

  == domain 4    score: 16.2 bits;  conditional E-value: 1.9e-05
  PF02183.13  12 rnydaLkaendsLqkEkekLraevlsLkekl 42 
                 +  ++Lk   +sL++E+++++aev++ ke +
  MMETSP1325-20131115|8052_1 124 AAVNKLKVHLESLKRENDRMQAEVETSKESM 154
                 566899999999***********99999876 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   2.0      0.42   1.2e+02      26      50 ..      23      47 ..       6      56 .. 0.56
   2 ?    0.3   2.3       1.4   4.3e+02      21      66 ..      61     106 ..      44     111 .. 0.59
   3 ?   14.8   0.6   4.4e-05     0.013      16      51 ..     116     151 ..     112     160 .. 0.88

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.42
  PF04977.10 26 iaalqaelaklkaeneeLeaevkdL 50
                 ++ +++++++k+e+e+L  + ++L
  MMETSP1325-20131115|8052_1 23 AETAEETVEEIKDEKEQLLLKYNQL 47
                3444555555555555555555555 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 1.4
  PF04977.10  21 qlkqeiaalqaelaklkaeneeLeaevkdLksdedyieeqARselg 66 
                 +lk++ +a++ e ++++ + +    + ++L+ + ++ +  AR +lg
  MMETSP1325-20131115|8052_1  61 ELKAQKDAIEMERERVNFDADTWRTQMNELERELEASATKARAQLG 106
                 3444444444444444444455566666666677777777777776 PP

  == domain 3    score: 14.8 bits;  conditional E-value: 4.4e-05
  PF04977.10  16 llalyqlkqeiaalqaelaklkaeneeLeaevkdLk 51 
                  ++ y++++ +++l+ +l++lk en++++aev+  k
  MMETSP1325-20131115|8052_1 116 RRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSK 151
                 57889***************************9875 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   6.2     0.078        23      57     270 ..      10      93 ..       2      95 .. 0.41
   2 ?   10.2  15.2    0.0011      0.34     142     273 ..      31     163 ..      31     167 .] 0.69

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.078
  PF00038.16  57 aelrkqldeltkerarleleldnlreeledlrekyeke.lnkresaEaelaklrkdldeatlarvdleakveslkeeleflkklheeEvkelqkqikeqvnvevdaarkldLtkilkeiraqyeelaeknreeaeewykakleelqeeaeknsealrsakeeitelrrqiqsleieleslkkqkeslerqlaeleerleeelkklqekiseleee 270
                 ++lr  +d l++  +  e  ++++++e e+l  ky++                                                                                                                                      + +++++ l ++ ++ +++++   er++ ++++ + +++ele+e
  MMETSP1325-20131115|8052_1  10 RQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLeS-----------------------------------------------------------------------------------------------------------------------------------TSQVNINGLMAELKAQKDAIEMERERVNFDADTWRTQMNELERE 93 
                 4444444444444444444444444444444444443222...................................................................................................................................22233333444444444444433444444444444444444444 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.0011
  PF00038.16 142 eEvkelqkqik.eqvnvevdaarkldLtkilkeiraqyeel.aeknreeae.ewykakleelqe....eaeknsealrsakeeitelrrqiqsleieleslkkqkeslerqlaeleerleeelkklqekiseleeelqe 273
                 eE+k+ ++q+  +    +++++++++++  ++e++aq +++ +e+ r + +  +++++++el++    +a+k  ++l +a+ee +  rr++ ++++ +++lk + esl+r+   +++++e   ++++    ++e+ ++e
  MMETSP1325-20131115|8052_1  31 EEIKDEKEQLLlKY--NQLESTSQVNINGLMAELKAQKDAIeMERERVNFDaDTWRTQMNELEReleaSATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMR----DMERRMNE 163
                 57777777774333..44556699*************998634555555542478999988765111157788889999************999999999999999999886555555555555554....44444444 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.3    0.0005      0.15      21      61 ..       9      49 ..       6      67 .. 0.89
   2 ?   -0.2   0.0       2.7   8.1e+02      35      56 ..      80     101 ..      69     106 .. 0.77
   3 ?    4.5   0.2     0.094        28      25      57 ..     116     148 ..     104     165 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.0005
   PF06103.6 21 lkklkktldevnktvkkltkqvdgitketeellaktnelle 61
                l++l++++d +++  ++ +++v++i+ e e+ll k n+l  
  MMETSP1325-20131115|8052_1  9 LRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLES 49
                7889999*******************************965 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 2.7
   PF06103.6  35 vkkltkqvdgitketeellakt 56 
                  ++ ++q++++ +e+e   +k+
  MMETSP1325-20131115|8052_1  80 ADTWRTQMNELERELEASATKA 101
                 5667789999999998887776 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.094
   PF06103.6  25 kktldevnktvkkltkqvdgitketeellaktn 57 
                 ++t  e++++v+kl+ +++ +++e +++ a+ +
  MMETSP1325-20131115|8052_1 116 RRTAYEMQAAVNKLKVHLESLKRENDRMQAEVE 148
                 445556666666666666666666665544433 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.2    0.0047       1.4      82     121 ..      10      49 ..       3      52 .. 0.76
   2 ?    9.5  10.5    0.0016      0.47      29     132 ..      59     163 ..      52     166 .. 0.92

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0047
   PF13851.1  82 ekdkqsLknlkaklkelekelknlkwesevleqrfekver 121
                  + ++    lk+++++ e+ ++++k e+e+l  +++++e+
  MMETSP1325-20131115|8052_1  10 RQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLES 49 
                 4556666778888888899999999999998888888875 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.0016
   PF13851.1  29 IkslkeeiaelkkkeekneklmaeikkenkrlkepLkk.aeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErdelykkfea 132
                   +lk +  +++ + e+ + +++   ++ ++l+ +L++ a++ +++L  + ++ e+++++  +++a +++l+ +l++lk e++ ++  +e+ ++  ++++++ ++
  MMETSP1325-20131115|8052_1  59 MAELKAQKDAIEMERERVNFDADTWRTQMNELERELEAsATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNE 163
                 56899*******************************963788899******************************************999999999999988775 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   4.6       2.7   8.1e+02      10      49 ..       7      46 ..       2      77 .. 0.61
   2 ?   15.3   9.0   4.7e-05     0.014      13     104 ..      74     162 ..      61     167 .] 0.88

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 2.7
   PF10473.4 10 ekLkesereadlLkdkvenLErELelseenqelvileaen 49
                ++L++ +   d Lk + e+ E   e  ++++e+++l+ ++
  MMETSP1325-20131115|8052_1  7 QELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQ 46
                5677777777777777777777777777777777775432 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 4.7e-05
   PF10473.4  13 kesereadlLkdkvenLErELelseenqelvileaenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervseLeklns 104
                  +++  ad+ + ++++LErELe s +    + +++  ++ e e  +    em+  +++L++ L s++ e++ ++ e++  +e + ++e  + 
  MMETSP1325-20131115|8052_1  74 ERVNFDADTWRTQMNELERELEASATK---ARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMN 162
                 456667899999************988...88999999************************************************998765 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9  11.0      0.35     1e+02      40     100 ..      80     162 ..       8     166 .. 0.67

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.35
  PF00804.20  40 d............................kqtkeeleeltaeikklankirskLksleqsieqeegqnrssadlrirktqhstlsrkFk 100
                                              ++++e++  + +e +  +nk++  L+sl+++      ++r +a++ + k+ ++ + r++ 
  MMETSP1325-20131115|8052_1  80 AdtwrtqmnelereleasatkaraqlgaaREETERHRRTAYEMQAAVNKLKVHLESLKRE------NDRMQAEVETSKESMRDMERRMN 162
                 033333333333333333333333366666999999999999999999999999999999......57777888777777777777665 PP

>> PF02186.10  TFIIE beta subunit core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.2    0.0024      0.71       5      45 ..      10      47 ..       7      81 .. 0.84
   2 ?   -0.1   0.0       2.9   8.7e+02      43      61 ..     131     146 ..     110     151 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0024
  PF02186.10  5 tvLakiVeYikerHlegddePltveeildelslldiskkvl 45
                 +L  iV+ +k+r    ++   tveei+de ++l ++ ++l
  MMETSP1325-20131115|8052_1 10 RQLRTIVDGLKTR---AETAEETVEEIKDEKEQLLLKYNQL 47
                6999*********...999999*******998876665554 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 2.9
  PF02186.10  43 kvlklLkeeLkenpkikvd 61 
                   l+ Lk   +en++++++
  MMETSP1325-20131115|8052_1 131 VHLESLK---RENDRMQAE 146
                 3344455...889998876 PP

>> PF08654.5  DASH complex subunit Dad2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   0.00066       0.2      11      45 ..       4      38 ..       2      42 .. 0.91
   2 ?   -0.2   0.0       2.9   8.8e+02      24      39 ..      81      96 ..      74     103 .. 0.79
   3 ?    2.0   0.2       0.6   1.8e+02      21      45 ..     124     148 ..     114     163 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00066
   PF08654.5 11 aeLenLkelrelsddLakqleeLeeklstlkdgte 45
                + +++L++lr + d L+++ e  ee ++ +kd+ e
  MMETSP1325-20131115|8052_1  4 EGFQELRQLRTIVDGLKTRAETAEETVEEIKDEKE 38
                56799***************************977 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 2.9
   PF08654.5 24 ddLakqleeLeeklst 39
                d+ ++q++eLe +l+ 
  MMETSP1325-20131115|8052_1 81 DTWRTQMNELERELEA 96
                6778999999999875 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.6
   PF08654.5  21 elsddLakqleeLeeklstlkdgte 45 
                 ++ ++L+ +le+L+ + ++++ + e
  MMETSP1325-20131115|8052_1 124 AAVNKLKVHLESLKRENDRMQAEVE 148
                 4555666666666666666655444 PP

>> PF10267.4  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.2    0.0097       2.9     212     291 ..      21     100 ..       6     105 .. 0.88
   2 ?    7.2   4.2     0.005       1.5     187     247 ..      98     158 ..      85     164 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0097
   PF10267.4 212 lslkklleeleeikeeqsrLeeslerLkeqlkkdlklllesLqeeryraerLEeqlndltelhqnEianLKqeLasmeek 291
                 ++ +++ e +eeik+e+++L  ++++L++ ++ +++ l++ L+ ++   e   e +n   +     + +L +eL   ++k
  MMETSP1325-20131115|8052_1  21 TRAETAEETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDAIEMERERVNFDADTWRTQMNELERELEASATK 100
                 567788999************************************99999888999999999999999999998877776 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.005
   PF10267.4 187 sadansnkggetg...slagsaaaaqselslkklleeleeikeeqsrLeeslerLkeqlkkdlk 247
                 + +a ++ g  ++   ++ ++++a++ +  ++kl+ +le++k+e++r++ ++e+ ke +++d++
  MMETSP1325-20131115|8052_1  98 ATKARAQLG--AAreeTERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKE-SMRDME 158
                 223333332..22233445589999*****************************999.667765 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.8     0.011       3.2      23      64 ..       8      49 ..       4      55 .. 0.85
   2 ?    1.7   1.1      0.39   1.2e+02      45      85 ..      59      99 ..      49     104 .. 0.75
   3 ?    9.4   6.6    0.0017       0.5      26      97 ..      93     164 ..      82     167 .] 0.80

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.011
   PF11932.3 23 sldqaqeaeqkanaaaaqsqkkidkladqtqellaeieqlqe 64
                +l+q++ +     ++a+++ + +++++d++++ll +++ql+ 
  MMETSP1325-20131115|8052_1  8 ELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLES 49
                678888888889999999999999999999999999999976 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.39
   PF11932.3 45 idkladqtqellaeieqlqeevenlkvyndqleklvenqqq 85
                +++l++q+++++ e e+++ ++++ +++ ++le+++e   +
  MMETSP1325-20131115|8052_1 59 MAELKAQKDAIEMERERVNFDADTWRTQMNELERELEASAT 99
                56788888888888888888888888888888888876655 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.0017
   PF11932.3  26 qaqeaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieei 97 
                 ++ + ++ka a+  +++++ ++  + + e++a  ++l+  +e+lk  nd+++++ve+ ++ + +++++++e 
  MMETSP1325-20131115|8052_1  93 ELEASATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQ 164
                 455566677777777888888888889999999999999999999999999999999999999999998875 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0         2   5.9e+02      41      59 ..      16      34 ..       6      36 .. 0.69
   2 ?   12.8   5.4   0.00035       0.1       6      97 .]      26     130 ..      23     130 .. 0.90
   3 ?    1.5   0.2       1.2   3.6e+02      37      62 ..     136     161 ..     131     166 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 2
   PF09177.6 41 tkeLenalesiewdledLe 59
                 + L++  e++e+++e+++
  MMETSP1325-20131115|8052_1 16 VDGLKTRAETAEETVEEIK 34
                4567788888888888876 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 0.00035
   PF09177.6   6 vkeevqksidkleslyrsweelrsdst............sskelkeltkeLenalesiewdledLeeavsvvekn.pekfglseeeisrRkqfvaeireeikevk 97 
                 ++e+v++  d+ e+l+ ++ +l s+s+            +++ ++  +++++   ++ ++++++Le++ ++++ + +++ g+ +ee +r++++  e++  ++++k
  MMETSP1325-20131115|8052_1  26 AEETVEEIKDEKEQLLLKYNQLESTSQvninglmaelkaQKDAIEMERERVNFDADTWRTQMNELERELEASATKaRAQLGAAREETERHRRTAYEMQAAVNKLK 130
                 67778888888899********9999999*******999999999999**********************9766658899*********************9986 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 1.2
   PF09177.6  37 lkeltkeLenalesiewdledLeeav 62 
                 lk+ ++++++++e+ ++ + d+e+ +
  MMETSP1325-20131115|8052_1 136 LKRENDRMQAEVETSKESMRDMERRM 161
                 56667777777777777777777755 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  11.1    0.0014      0.41     300     455 ..      12     162 ..       2     167 .] 0.58

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0014
   PF13166.1 300 ieklleelesilse.ekensefkedveelkaelealeeeleklekaleeKlkdpfsslelesiadeieeinelvdkinelirkhNekidnlkeeknkakkklwlhlv..aelkedideyekklkklekkinslekeleklekeikklekeikelekelk 455
                  + +++ l++ +++ e+  +e+k+++e+l  ++++le++ +++ + l ++lk   + +e+e    +++      +++nel r+    +++  ++  +a+++ ++h +  +e+++ +++++ +l++l+++  ++++e+e+ +       + ++++e+ ++
  MMETSP1325-20131115|8052_1  12 LRTIVDGLKTRAETaEETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDAIEMERERVNFD-ADTWRTQMNELERELEASATKARAQLGAAREETERHRRtaYEMQAAVNKLKVHLESLKRENDRMQAEVETSK-------ESMRDMERRMN 162
                 34455556666655344456677778888888888888888888777777777777777765554444.334456777777777777777777888888888888762233334444444444444444444444444444.......44444444333 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.9     0.006       1.8      82     118 ..      19      55 ..       8      57 .. 0.89
   2 ?    6.0   0.7     0.027       7.9      82     116 ..      62      96 ..      59     100 .. 0.90
   3 ?    6.7   2.3     0.016       4.8      72     116 ..     119     163 ..     117     166 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.006
                 HHHHHHHHHHHHHHH---HHHHHHH---HHHHHHHHH CS
  PF02996.12  82 lkkkleelekqlekleeeleklkdqittleanlaqly 118
                 lk + e++e+++e++++e e+l  ++++le + + + 
  MMETSP1325-20131115|8052_1  19 LKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQVNI 55 
                 89999************************99988765 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.027
                 HHHHHHHHHHHHHHH---HHHHHHH---HHHHHHH CS
  PF02996.12  82 lkkkleelekqlekleeeleklkdqittleanlaq 116
                 lk +++ +e  +e ++ + +++++q+++le++l++
  MMETSP1325-20131115|8052_1  62 LKAQKDAIEMERERVNFDADTWRTQMNELERELEA 96 
                 7899999************************9986 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.016
                 EEEHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH---HHHHHHH CS
  PF02996.12  72 eksleeAiellkkkleelekqlekleeeleklkdqittleanlaq 116
                 +++++ A+  lk  le+l++  + +++e+e+ k+ +  +e+ +++
  MMETSP1325-20131115|8052_1 119 AYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNE 163
                 68999***********************************99876 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  14.5    0.0025      0.74     242     384 ..      24     163 ..       6     167 .] 0.43

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0025
   PF12128.3 242 ekvapeieklqeefeqleslllkLqll.hvelkadeerleeeqeevkeakkelkeqlrtledelkeasdelnqelsaanakleakeselealeeqkkkfe.dkdieklkadldqlpsirseleeveaeldaltekvqdvqekfer 384
                 e  ++ +e+++ e eql    ++L ++ +v++     +l+ ++ +++ + +++++ ++t + +++e + el+    +a+a+l a+++e e+   ++ ++e ++ ++klk++l+ l   ++e   ++ae++   e+++d+++++++
  MMETSP1325-20131115|8052_1  24 ETAEETVEEIKDEKEQLLLKYNQLESTsQVNINGLMAELKAQKDAIEMERERVNFDADTWRTQMNELERELEASATKARAQLGAAREETERH--RRTAYEmQAAVNKLKVHLESL---KRENDRMQAEVETSKESMRDMERRMNE 163
                 33334444444444444444444444312344444444444444444444444444444444444444444444444444444444444432..233333233444444444432...344444444444444444444444444 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   1.0    0.0082       2.4      66     102 ..       5      42 ..       1      47 [. 0.80
   2 ?    3.5   0.8      0.21        62      34      66 ..      69     101 ..      64     113 .. 0.73
   3 ?    8.1   5.9    0.0076       2.3       8      94 ..      84     165 ..      78     167 .] 0.82

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0082
                 ..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  PF02403.17  66 k.edaeeliaevkelkeelkaleaelkeleaeleklll 102
                 + ++  +l+  v+ lk++ +++e++++e+++e e+lll
  MMETSP1325-20131115|8052_1   5 GfQELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLL 42 
                 45666778888899999999999999999999999887 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT.. CS
  PF02403.17  34 ldeerrelqveleelqaerNelskeIgkakkkk 66 
                 ++ er +++++++  +++ Nel +e++    k 
  MMETSP1325-20131115|8052_1  69 IEMERERVNFDADTWRTQMNELERELEASATKA 101
                 566888889999999999999998887766543 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.0076
                 HH-HHHHHHHHHH-.TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17   8 RenpeavkeklkkRgedkedvdelleldeerrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkele 94 
                 R+++ ++++ l++   +++  ++l ++ ee  + + ++ e+qa  N+l  +++++k+++   +++ aev++ ke + ++e +++e +
  MMETSP1325-20131115|8052_1  84 RTQMNELERELEAS--ATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKREN---DRMQAEVETSKESMRDMERRMNEQK 165
                 66666666666644..56777889999999999999********************976...7899999999999999999998866 PP

>> PF12443.3  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.7     0.063        19      44      77 ..       6      39 ..       2      71 .. 0.84
   2 ?    9.9   2.0    0.0021      0.63      11      90 ..      84     161 ..      75     166 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.063
   PF12443.3 44 fqkirelkaeiykLkeqleeLkekvdetskeikq 77
                fq+ r+l+  +  Lk + e   e v+e++ e +q
  MMETSP1325-20131115|8052_1  6 FQELRQLRTIVDGLKTRAETAEETVEEIKDEKEQ 39
                8889999999999999999999999888888877 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0021
   PF12443.3  11 kaaqeaLegEylkacrelsptpqkdasksss.yifqkirelkaeiykLkeqleeLkekvdetskeikqespdhlqDsklvl 90 
                 ++  + Le E +++  +     q++a++    +      e +a + kLk  le Lk   d ++ e++  +   + D    +
  MMETSP1325-20131115|8052_1  84 RTQMNELERELEASATKA--RAQLGAAREETeRHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKES-MRDMERRM 161
                 566667788888777665..456666655550455567799************************9976655.77766555 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   6.3      0.38   1.1e+02       3      68 ..      37     103 ..       2     120 .. 0.76
   2 ?    9.7   4.0     0.003       0.9      16      63 ..     118     165 ..     109     167 .] 0.84

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.38
   PF06156.8   3 kkelfdklseleeqlee.lleeleelkkelkelleenaelkleneklrerleeleeeekkkekkkkk 68 
                 k++l+ k ++le++ +  ++  ++elk++  ++  e ++++ + ++ r++++ele+e +++ +k+++
  MMETSP1325-20131115|8052_1  37 KEQLLLKYNQLESTSQVnINGLMAELKAQKDAIEMERERVNFDADTWRTQMNELERELEASATKARA 103
                 5667777888888776514556789999999999999999999999999999998844444333333 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.003
   PF06156.8  16 qleelleeleelkkelkelleenaelkleneklrerleeleeeekkke 63 
                 +  e+++ +++lk +l++l  en +++ e+e+ +e ++++e++ ++++
  MMETSP1325-20131115|8052_1 118 TAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQK 165
                 56689999*******************************988544443 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   5.3      0.26        78       6      64 ..       9      68 ..       4      74 .. 0.84
   2 ?   10.7  11.0    0.0011      0.34      12     108 ..      58     151 ..      51     159 .. 0.64

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.26
   PF13863.1  6 kremeevqlaldakreeierkeeelkereeelekkqeelqesli.kfnkflkdneakrer 64
                 r+++ +   l+++ e +e+  ee+k ++e+l  k  +l+++ + ++n  + + +a++++
  MMETSP1325-20131115|8052_1  9 LRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQvNINGLMAELKAQKDA 68
                57788888899999999999999********99999999998766999999998888865 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.0011
   PF13863.1  12 vqlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaeeekkekkekeeeikklkaqleelkaeiekleekleeyq 108
                 ++++l+a++  ie+  e+++      + +  el++   + +   +++ a+  +a++++e+ ++   e+++ ++klk +le+lk+e++++++++e+++
  MMETSP1325-20131115|8052_1  58 LMAELKAQKDAIEMERERVNFDADTWRTQMNELER---ELEASATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSK 151
                 56788888888877777776666666665555555...45555666666666666666666666666666666666666666666666666666554 PP

>> PF04012.7  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.5   0.00083      0.25     105     152 ..       7      54 ..       2      56 .. 0.87
   2 ?    3.4  11.7      0.13        38      47     142 ..      60     152 ..      57     166 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00083
   PF04012.7 105 tqlaqqrsaveqlrkqlealetkieelkakkellkarekaakaqeavq 152
                 ++l q+r+ v+ l++  e +e  +ee+k++ke l+++ ++     +v+
  MMETSP1325-20131115|8052_1   7 QELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQVN 54 
                 67899999************************9999988877777765 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.13
   PF04012.7  47 aqviarqkqlerkleeqkeqakklekkAkaALtkgeeeLArealaeikslekqaealetqlaqqrsaveqlrkqlealetkieelkakkellkare 142
                 a+++a++ + e++ e+ + +a  +  +  + L++  e+ A +a a++  + +++e+++  + ++++av +l+  le l++  + ++a++e+   +e
  MMETSP1325-20131115|8052_1  60 AELKAQKDAIEMERERVNFDADTWRTQMNE-LERELEASATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETS--KE 152
                 888999999999999999999999998877.7888888888888888888888888888888888888888888888888888888777763..34 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.4      0.16        48      67     132 ..      11      77 ..       4     100 .. 0.47
   2 ?    7.8   0.4    0.0049       1.5      31     105 ..      85     159 ..      79     166 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.16
   PF04582.7  67 dvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaa.lsslqtevdanstdisnlk 132
                 ++ + +d +k+  +  +++v+++++  ++l  + ++l ++++ + +  +++l+ + da   +   ++
  MMETSP1325-20131115|8052_1  11 QLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQVNINGlMAELKAQKDAIEMERERVN 77 
                 4444444444444555555555555555555555555555444433213444444444444444444 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0049
   PF04582.7  31 tavyerltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlse 105
                 t++ e   +lea++   +  ++++ ++         ++  +++++k++l++l++e   +q  v+++  ++ d+  
  MMETSP1325-20131115|8052_1  85 TQMNELERELEASATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMER 159
                 666677778999999999999999999999999999999999999999999999999999999999998888765 PP

>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   5.2    0.0058       1.7     221     313 ..       8      97 ..       3     105 .. 0.84
   2 ?    3.7  13.2     0.066        20     142     267 ..      27     164 ..      24     167 .] 0.72

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0058
   PF10498.4 221 hleqmkqlkkaieksleelkqsLkklsqdlskalekiekrEkqlnnqleelvqeykeareelsevqekynqlsksvsektaelseiseeleqv 313
                 +l q +++ +++++  e++++  ++++++ ++ l k +++E++ + +++ l++e+k++++ ++  +e++n         +++++e++ ele+ 
  MMETSP1325-20131115|8052_1   8 ELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDAIEMERERVNFDA---DTWRTQMNELERELEAS 97 
                 6788999999***********************************************9999998887776544...44445667777777765 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.066
   PF10498.4 142 eiileeveeeqeaeekeqde.....lldlnvlkkktkk.gdtsekeqakqvles...kvdaeewklevervapqL..kveiktda.kdWrkhleqmkqlkkaieksleelkqsLkklsqdlskalekiekrEkqlnnq 267
                 e ++ee+++e+e+   + ++      +++n l ++ k+ +d  e+e++++  +     ++++e++ e+e+ a++   +  +  ++ +  r    +m++  ++++  le+lk   ++++++++ + e ++  E+ +n+q
  MMETSP1325-20131115|8052_1  27 EETVEEIKDEKEQLLLKYNQlestsQVNINGLMAELKAqKDAIEMERERVNFDAdtwRTQMNELERELEASATKAraQLGAAREEtERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQ 164
                 5566777777666555555455666677888887777777777777776655441115677777777777777772244344444488999999999999999999999999999*********************98 PP

>> PF01017.15  STAT protein, all-alpha domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2  10.1     0.097        29       3      68 ..       8      73 ..       6     166 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.097
  PF01017.15  3 kqkeiesklealknsvqeveqdikkLedvqeefdfkyktlqslkeleanrnslkealkqeklllee 68
                + +++ + +  lk++ + +e+++++++d+ e+  +ky++l+s  + + n+ + + ++++   ++e+
  MMETSP1325-20131115|8052_1  8 ELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDAIEMER 73
                5578889999************************************99998877766666555443 PP

>> PF10392.4  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.3      0.34     1e+02      69      94 ..      24      50 ..       9      70 .. 0.63
   2 ?    8.0   1.9    0.0077       2.3      42     108 ..      87     160 ..      58     165 .. 0.62

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.34
   PF10392.4 69 slss.vlselksslesLsasyerlksk 94
                ++ + +++e+k + e+L   y++l+s 
  MMETSP1325-20131115|8052_1 24 ETAEeTVEEIKDEKEQLLLKYNQLEST 50
                433336666666666666666666654 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0077
   PF10392.4  42 iqeldkrlrqlitsnhleL.......lehlskskslssvlselksslesLsasyerlkskvlepyeeaeklqsa 108
                 ++el+++l+   t+   +L         h ++  + ++ +++lk +lesL+   +r++ +v +  e+++  +++
  MMETSP1325-20131115|8052_1  87 MNELERELEASATKARAQLgaareetERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERR 160
                 35666666666666666662221110223334445566888999999999999999999998888877776665 PP

>> PF06013.7  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   2.6      0.21        63      44      80 ..      64     100 ..      10     104 .. 0.57
   2 ?    5.7   0.3     0.044        13      49      85 ..     122     158 ..     106     163 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.21
   PF06013.7  44 aaadafqaafeewkqaaeklveaLeeisealkqaaek 80 
                 a +da +++ e+++  a++  ++++e++++l+++a+k
  MMETSP1325-20131115|8052_1  64 AQKDAIEMERERVNFDADTWRTQMNELERELEASATK 100
                 4567777777788888888888888888888888776 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.044
   PF06013.7  49 fqaafeewkqaaeklveaLeeisealkqaaekyedaD 85 
                  qaa +++k  +e l+++ + ++ ++++++e+++d +
  MMETSP1325-20131115|8052_1 122 MQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDME 158
                 4666778888888888888888888888888888766 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   7.2     0.036        11     178     252 ..      15     100 ..       4     121 .. 0.40
   2 ?    6.1  10.9     0.011       3.4     152     268 ..      38     155 ..      37     167 .] 0.67

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.036
   PF08317.6 178 ilpklrekkealkeelasLrqlkde.......leecdseeleklreeLssleekieekrkkle....eleeelqelkkkiealkek 252
                 i++ l+ + e  +e+++++++ k++       le++++ +++ l  eL++ ++ ie +r+ ++      +++++el+ ++ea+++k
  MMETSP1325-20131115|8052_1  15 IVDGLKTRAETAEETVEEIKDEKEQlllkynqLESTSQVNINGLMAELKAQKDAIEMERERVNfdadTWRTQMNELERELEASATK 100
                 22222222222222222222222222222222444455555555555555555555444443311113444444444444444433 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.011
   PF08317.6 152 eeLeenleelke.deellnkklelinsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekile 268
                 e+L  ++++l++ ++ ++n  +++++  +++++   e+++  +++ r++ +ele   +    k+r +L +  e+ e++r+   e+++ +++lk ++e+lk +   +++e++ +++ ++
  MMETSP1325-20131115|8052_1  38 EQLLLKYNQLEStSQVNINGLMAELKAQKDAIEMERERVNFDADTWRTQMNELERELEASATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMR 155
                 5666666666541334566667777777777777777777777777777777777777777888888888888888888888888888888888888888888888888876655443 PP

>> PF04124.7  Dor1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.5      0.12        37      53      99 ..       7      53 ..       3      63 .. 0.72
   2 ?    9.3   5.2     0.001      0.31      20      98 ..      84     163 ..      64     167 .] 0.85

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.12
   PF04124.7 53 qelediraqledLvlklpkLteectrfskkaeeisekrkenkllldk 99
                qel ++r  ++ L  +++  +e +++++++ e+++ k+++ ++++++
  MMETSP1325-20131115|8052_1  7 QELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQV 53
                67777777777777777777777777777777777777776666665 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.001
   PF04124.7  20 aeeaeeilaqiqdLarknyktlidaaealeairqelediraqledLvlklpkLteectrfskkaeeisek.rkenkllld 98 
                 + + +e+ +++ + a k + +l  a e++e+ r++  +++a +++L  +l+ L+ e  r++++ e + e+ r++ + + +
  MMETSP1325-20131115|8052_1  84 RTQMNELERELEASATKARAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESmRDMERRMNE 163
                 567788999999999999999999999*******************************************8666666654 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.5     0.006       1.8     507     626 ..      10     132 ..       7     161 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.006
   PF04632.7 507 rdlarlaagraaeara..rfesrmldrlaqlaprlaaapaasraalrdalaalrvgravlrLrralaralpaparaaidavlaala.fraraaarkerrlaapaalldaldaalaalaadpaa 626
                 r+l+++++g +++a+   +   ++ d   ql+    + +++s+   ++++a+l + + ++++ r++ +  ++ +r  ++++ ++l+  +++a+a+ + ++++++++++ + +++aa+++   +
  MMETSP1325-20131115|8052_1  10 RQLRTIVDGLKTRAETaeETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDAIEMERERVNFDADTWRTQMNELERELEaSATKARAQLGAAREETERHRRTAYEMQAAVNKLKVH 132
                 566666665555543334888899999999999999999999**********************99998889999999999999999899999999999999999999999999999876554 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   7.4       1.1   3.2e+02      59     106 ..       7      93 ..       1     101 [. 0.50
   2 ?    6.5  12.5      0.02       5.8       2     112 ..      63     156 ..      45     167 .] 0.47

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 1.1
   PF07926.7  59 qeLtklkkelaelqkeaselrkeadsakael.......................................neleekweeeksmLeve 106
                 qeL++l++ ++ l++ a++ ++++++ k+e                                        n   + w ++ ++Le+e
  MMETSP1325-20131115|8052_1   7 QELRQLRTIVDGLKTRAETAEETVEEIKDEKeqlllkynqlestsqvninglmaelkaqkdaiemerervNFDADTWRTQMNELERE 93 
                 566666666666666666666555555555555555555555555555544455553333333333333344444444444444444 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.02
   PF07926.7   2 eaeisslkeelkrlesqiaaieeqiqklkdDlenqaeiareaqdkYerelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLevelselek 112
                 +a+++ +++e +r++ ++ + + q+++l+++le+ a++ar+                 +L ++++e ++ +  a e+++ +++ k +l+ l+++    +++ e+ ++++++
  MMETSP1325-20131115|8052_1  63 KAQKDAIEMERERVNFDADTWRTQMNELERELEASATKARA-----------------QLGAAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRD 156
                 44555555555555555555555555555555555555554.................45555555555555444444444444444444444444444444444443322 PP

>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   8.7    0.0074       2.2      26     142 ..      37     149 ..      12     166 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0074
                 ---EEEEE--HHHHHHHH..HHHHHHHHHHH...HH.......HHHHHHHTTTSS.-HHHHHHHHHHHHHH..........HHHHHHHHHHHHTTEE..E-S--.-----BSS-B------ CS
  PF00529.15  26 aGdvLvrlDptpaqaala..raeaelaaaqadaaqarlaaekrerlqalvkqqaaesekeadaarrearealaasqalaaskaeleaardnlasaea..alpaslgsikasqatlgalltn 142
                 + ++L+++++  ++++++   + ael+ aq+  ++ + ++e +++ +  + +q  e e+e +a ++ ar +l a +     +++ ++ r++++ + a   l++ l s+k+++  ++a+++ 
  MMETSP1325-20131115|8052_1  37 KEQLLLKYNQLESTSQVNinGLMAELK-AQK--DAIEMERERVNFDADTWRTQMNELERELEASATKARAQLGAAR-----EETERHRRTAYEMQAAvnKLKVHLESLKRENDRMQAEVET 149
                 789999999999999999877777777.555..3666677777777777777777777777777776677766666.....9999999999975544114444448888888888888875 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.6    0.0095       2.8      58     121 ..       8      70 ..       2      82 .. 0.77
   2 ?    6.3   1.4     0.029       8.6      30      76 ..     118     164 ..     112     167 .] 0.80

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0095
                 HHHHHHHHHHCCCHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  58 lvksikeslkekqkqakdndniesavskslekkiililekkilaqesqirvLqevlrsneskiq 121
                   +++ +++ + ++ a+  ++++++++++ +++++l++++  ++ + +i+ L   l++++  i+
  MMETSP1325-20131115|8052_1   8 ELRQLRTIVDGLKTRAETAEETVEEIKDE-KEQLLLKYNQLESTSQVNINGLMAELKAQKDAIE 70 
                 45667777777777778888888888888.8888888888888888888888888888887764 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.029
                 CCCCCCHHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCH CS
   PF08702.5  30 yekdvdkkieklenlLeqlanktkeieelvksikeslkekqkqakdn 76 
                 ++ +++  ++kl+  Le+l++++  ++  v++ kes+++ +   +++
  MMETSP1325-20131115|8052_1 118 TAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQ 164
                 55678889999999999999999999999999999998877665544 PP

>> PF11365.3  Protein of unknown function (DUF3166)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.3    0.0039       1.2      35      78 ..       6      49 ..       2      64 .. 0.89
   2 ?    1.8   0.8         1     3e+02       6      18 ..     101     113 ..      55     132 .. 0.49
   3 ?    2.5   2.1      0.62   1.8e+02       7      45 ..     102     140 ..      95     165 .. 0.54

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0039
   PF11365.3 35 eeELqkyksayGdldsvaelaaGapdttreaelklrLklveeea 78
                 +EL +++ ++  l + ae+a+ + ++ + ++ +l Lk  ++e 
  MMETSP1325-20131115|8052_1  6 FQELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLES 49
                48************************************999875 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 1
   PF11365.3   6 LrcqLqfvkeEaa 18 
                  r qL  ++eE++
  MMETSP1325-20131115|8052_1 101 ARAQLGAAREETE 113
                 2333333333333 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.62
   PF11365.3   7 rcqLqfvkeEaaLlrkklaklekEkdkveeELqkyksay 45 
                 r qL  ++eE++  r+   +++   +k++  L+ +k   
  MMETSP1325-20131115|8052_1 102 RAQLGAAREETERHRRTAYEMQAAVNKLKVHLESLKREN 140
                 556666666666555555555555555555555544433 PP

>> PF09486.5  Bacterial type III secretion protein (HrpB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   7.4       2.6   7.7e+02      77     114 ..      80     117 ..       6     118 .. 0.75
   2 ?    9.4   5.6    0.0029      0.86      10      63 ..     112     165 ..     107     167 .] 0.92

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 2.6
   PF09486.5  77 lrryrdvlveelaaaeqavaaarqalqakvaelaavrr 114
                  + +r+++ e  + +e+ +++ar++l a+++e +  rr
  MMETSP1325-20131115|8052_1  80 ADTWRTQMNELERELEASATKARAQLGAAREETERHRR 117
                 46688888888888888888888888888888777665 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.0029
   PF09486.5  10 lerkarrderlraelsalraalealdrelaecraaveakadrlaahdarlddla 63 
                  er +r    ++a++++l+  le+l+re ++ +a+ve  ++ + + ++r+++  
  MMETSP1325-20131115|8052_1 112 TERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQK 165
                 589999999****************************************98765 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.5    0.0011      0.33      29      69 ..      10      50 ..       7      54 .. 0.92
   2 ?   -0.1   2.4       2.4   7.3e+02      41      51 ..      86      96 ..      49     119 .. 0.53
   3 ?    5.3   5.8      0.05        15      16      72 ..     107     163 ..      94     165 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.0011
   PF12329.3 29 lkhnntikkLrkknkelekeieelkkkleklekeleeleer 69
                 +++++++ L+  ++ +e+++ee k++ e+l  + ++le++
  MMETSP1325-20131115|8052_1 10 RQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLEST 50
                6789**********************************985 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 2.4
   PF12329.3 41 knkelekeiee 51
                +++ele e+e 
  MMETSP1325-20131115|8052_1 86 QMNELERELEA 96
                33333333332 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.05
   PF12329.3  16 qLmeEgekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleerlkr 72 
                 + +eE e+ + +  +  +++ kL+ +++ l  e ++ ++++e + +++ ++e+r+ +
  MMETSP1325-20131115|8052_1 107 AAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNE 163
                 557888888888888899999999999999999999999999999999999999876 PP

>> PF11273.3  Protein of unknown function (DUF3073)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1       7.9   2.3e+03      41      53 ..      27      39 ..       7      50 .. 0.49
   2 ?    2.7   0.1      0.54   1.6e+02      19      42 ..      49      72 ..      34      86 .. 0.66
   3 ?    5.6   2.7     0.069        20      21      61 ..      83     123 ..      78     166 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 7.9
   PF11273.3 41 adeddkyeddedd 53
                +++ ++ +d++++
  MMETSP1325-20131115|8052_1 27 EETVEEIKDEKEQ 39
                2223333444443 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.54
   PF11273.3 19 sspdtDydaLqrELsggsskssad 42
                s+ +++ + L  EL++++++ + +
  MMETSP1325-20131115|8052_1 49 STSQVNINGLMAELKAQKDAIEME 72
                5889999*******9944333333 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.069
   PF11273.3  21 pdtDydaLqrELsggsskssadeddkyeddedddldeyade 61 
                   t  ++L+rEL++++ k +a+  +  e++e     +y+ +
  MMETSP1325-20131115|8052_1  83 WRTQMNELERELEASATKARAQLGAAREETERHRRTAYEMQ 123
                 57899********9777777777777776666666666655 PP

>> PF02662.11  Methyl-viologen-reducing hydrogenase, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0       1.5   4.4e+02      78      99 ..      22      43 ..      15      57 .. 0.56
   2 ?    2.9   0.1      0.24        71      75     100 ..      55      80 ..      48     103 .. 0.73
   3 ?    6.6   0.5     0.018       5.3      67     103 ..     114     150 ..     103     166 .. 0.75

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 1.5
  PF02662.11 78 rveklkelleelglepervrle 99
                r e ++e++ee+  e+e++ l+
  MMETSP1325-20131115|8052_1 22 RAETAEETVEEIKDEKEQLLLK 43
                5555555555555555554433 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.24
  PF02662.11  75 aekrveklkelleelglepervrlee 100
                 ++  +++lk   + + +e+erv++  
  MMETSP1325-20131115|8052_1  55 INGLMAELKAQKDAIEMERERVNFDA 80 
                 56779999999999999999999954 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.018
  PF02662.11  67 hylkgnekaekrveklkelleelglepervrleevsa 103
                  +++  ++++  v+klk +le+l  e++r++ e   +
  MMETSP1325-20131115|8052_1 114 RHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVETS 150
                 6888999***********************9864333 PP

>> PF10337.4  Protein of unknown function (DUF2422)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   6.0     0.025       7.3     219     370 ..       6     164 ..       4     167 .] 0.66

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.025
   PF10337.4 219 hvvlkelagllgllrkllklhkkfleslepsnesealnfkklekait.kirelvakleadlsflklEisyGrlsadd....lkelrrllrnlispvag.lsyfydlferlrarss.laa..dheklfsaieekyaevgayetkesikllearaaersltvs 370
                 ++ l +l +++  l+   +  + ++e+ ++++e+ +l++++le + + +i +l+a+l+a+   + +E  + +++ad     + el+r l+   +     l      +er r+ +  ++a  ++ k+  +  + + +  + e ++s+++++  ++er++ ++
  MMETSP1325-20131115|8052_1   6 FQELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQvNINGLMAELKAQKDAIEMERERVNFDADTwrtqMNELERELEASATKARAqLGAAREETERHRRTAYeMQAavNKLKVHLESLKRENDRMQAEVETSKESMR--DMERRMNEQ 164
                 5667888999999*****************************9886549**************************971111444444444333333331333333333333322222233344444444444446666666666766776..677666655 PP

>> PF02601.10  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  11.3     0.024       7.2     134     269 ..      22     160 ..      16     166 .. 0.59

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.024
  PF02601.10 134 Ptkaaelivpnkeelkeklknleqrlsralksklekekaklnllknrltlksrrk..plskleqeeerleelkerleksleqllqskesqlekln.aslaknnpdyklnkklekitllkneldselssaesklrileek 269
                   + ae+ v++ ++ ke+l    ++l++  + +++ + a+l+  k+ + ++++r    + + +++ ++le+  e+  ++++ +l +++++ e+ +   ++ + + +kl+ +le +++ + +++ e+++ ++++r++e++
  MMETSP1325-20131115|8052_1  22 RAETAEETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDAIEMERERVnfDADTWRTQMNELERELEASATKARAQLGAAREETERHRrTAYEMQAAVNKLKVHLESLKRENDRMQAEVETSKESMRDMERR 160
                 4556888888888888888888888888888888888888888888888777554222222344444444444444445666677777777663312233333444444444555555555666666666666666655 PP

>> PF08581.5  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   1.0       1.2   3.5e+02      38      71 ..       6      38 ..       3      46 .. 0.64
   2 ?    2.5   4.4      0.51   1.5e+02       3      75 ..      27      96 ..      25     100 .. 0.80
   3 ?    4.2   1.7      0.14        43       7      72 ..      67     132 ..      67     135 .. 0.48
   4 ?   10.0   1.1    0.0023      0.67       6      38 ..     133     165 ..     128     167 .] 0.92

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 1.2
   PF08581.5 38 iqEleqirqtvyeLeqahrkikekYeeeiarLkr 71
                 qEl q+r+ v  L  + ++  e+ e ei+  k+
  MMETSP1325-20131115|8052_1  6 FQELRQLRTIVDGLKTRAETAEETVE-EIKDEKE 38
                57888888888888766655554443.4554444 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.51
   PF08581.5  3 neLLdairaEfealsreassykaqkedyelkiqqqiqEleqirqtvyeLeqahrkik.ekYeeeiarLkreLea 75
                +e  ++i+ E e+l     +y++ + + + +i+  ++El++ +    e+e+++ +   +++ +++++L+reLea
  MMETSP1325-20131115|8052_1 27 EETVEEIKDEKEQLLL---KYNQLESTSQVNINGLMAELKAQK-DAIEMERERVNFDaDTWRTQMNELERELEA 96
                5777889999888888...777888888999999999999855.567999999998636899999999999997 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.14
   PF08581.5   7 dairaEfealsreassykaqkedyelkiqqqi...........qEleqirqtvyeLeqahrkikekYeeeiarLkre 72 
                 dai +E e ++ +a ++++q +++e+++++             +E e  r t ye++ a +k+k            +
  MMETSP1325-20131115|8052_1  67 DAIEMERERVNFDADTWRTQMNELERELEASAtkaraqlgaarEETERHRRTAYEMQAAVNKLK-----------VH 132
                 6677777777777777777777777766544300000001111444445555555555555554...........44 PP

  == domain 4    score: 10.0 bits;  conditional E-value: 0.0023
   PF08581.5   6 LdairaEfealsreassykaqkedyelkiqqqi 38 
                 L+++++E + ++ e++++k++  d+e+++++q 
  MMETSP1325-20131115|8052_1 133 LESLKRENDRMQAEVETSKESMRDMERRMNEQK 165
                 99****************************995 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2  10.5       2.7   7.9e+02      30     152 ..      10     127 ..       6     130 .. 0.73
   2 ?   10.4   3.9    0.0014      0.43      30      75 ..     118     165 ..     111     167 .] 0.83

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 2.7
   PF13094.1  30 ralerqlaaelksielLqeeirreeaelekdeekleeLeknakalererkeesknlhpvlqelesevleenalaekedlklseknleptldeellellkqlnkhleslqgnlaqleglkeale 152
                 r+l + +   ++  e+ +e +++   e e+ + k ++Le +++ + + ++ e k      q+++ e+++e+++ +    ++++++le++l+    +   ql+   e  +  ++  ++++ a++
  MMETSP1325-20131115|8052_1  10 RQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQVNINGLMAELKA-----QKDAIEMERERVNFDADTWRTQMNELERELEASATKARAQLGAAREETERHRRTAYEMQAAVN 127
                 5666666666666677777888888888999999999************999999.....999999999999999888888888888888777777777777333333333333555555554 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.0014
   PF13094.1  30 ralerqla..aelksielLqeeirreeaelekdeekleeLeknakale 75 
                 +a e q+a  + + ++e L++e +r++ae e+++e  + +e++  +++
  MMETSP1325-20131115|8052_1 118 TAYEMQAAvnKLKVHLESLKRENDRMQAEVETSKESMRDMERRMNEQK 165
                 555666654488899***************************988775 PP

>> PF03131.12  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.3       1.5   4.4e+02      68      93 ..      22      47 ..       3      53 .. 0.56
   2 ?    7.1   0.6      0.02       5.9      53      90 ..      64     101 ..      59     107 .. 0.88
   3 ?    7.3   1.6     0.017       5.1      57      90 ..     121     154 ..     107     159 .. 0.71

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 1.5
  PF03131.12 68 eveklkeevarlarerdalkeklekl 93
                  e  +e v +++ e++ l  k+++l
  MMETSP1325-20131115|8052_1 22 RAETAEETVEEIKDEKEQLLLKYNQL 47
                33334444445555555555555544 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.02
  PF03131.12  53 qqkeelekekselaqeveklkeevarlarerdalkekl 90 
                  qk+++e e+++++ + +  ++++++l+re +a  +k 
  MMETSP1325-20131115|8052_1  64 AQKDAIEMERERVNFDADTWRTQMNELERELEASATKA 101
                 59999************************999987775 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.017
  PF03131.12  57 elekekselaqeveklkeevarlarerdalkekl 90 
                 e++++ ++l+ ++e lk+e+ r++ e ++ ke +
  MMETSP1325-20131115|8052_1 121 EMQAAVNKLKVHLESLKRENDRMQAEVETSKESM 154
                 4555667788888888888888888888777655 PP

>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   1.5      0.19        57      24      69 ..       8      53 ..       2      66 .. 0.73
   2 ?    9.0   2.3     0.003      0.88      13      54 ..     107     148 ..      94     165 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.19
   PF10224.4 24 qvleLqdsLedLseRveaVkeendKLeseNkvLqqYienLmsassv 69
                + ++L+   ++L +R e  +e  + +++e + L    ++L s+s+v
  MMETSP1325-20131115|8052_1  8 ELRQLRTIVDGLKTRAETAEETVEEIKDEKEQLLLKYNQLESTSQV 53
                5678888888888888888888888877765444444677777776 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.003
   PF10224.4  13 lekeekqrlieqvleLqdsLedLseRveaVkeendKLeseNk 54 
                 + +ee +r  + + e+q++ ++L   +e+ k end+++ e +
  MMETSP1325-20131115|8052_1 107 AAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVE 148
                 5689999999**************************999866 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   1.8     0.045        13     191     252 ..       9      68 ..       2      77 .. 0.61
   2 ?    1.5  12.7      0.34     1e+02     123     245 ..      34     160 ..      22     167 .] 0.36

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.045
   PF14362.1 191 ldaaqaeletlkaqldaaqaeleankrkaaleeeraakvaeeqaansandGllaRleAlgel 252
                 l ++++ ++ lk++ ++a++++e  + k++ e+   + ++ e + + + +Gl+a+l+A ++ 
  MMETSP1325-20131115|8052_1   9 LRQLRTIVDGLKTRAETAEETVE--EIKDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDA 68 
                 45555566667777777777777..4444444444444444444456899999999997665 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.34
   PF14362.1 123 aaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGt........................ggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaeleankrkaaleeeraakvaeeqaansandGllaR 245
                 ++ ++q+  ++++ + + + +i+ l ael++++++++ ++e+v+ ++++                         ++ + +     + e ++a+++++  le+lk+++d  qae+e                    + +++ +++  R
  MMETSP1325-20131115|8052_1  34 KDEKEQLLLKYNQLESTSQVNINGLMAELKAQKDAIEMERERVNFDADTWrtqmnelereleasatkaraqlgaAREETERHRRTAYEMQAAVNKLKVHLESLKRENDRMQAEVE--------------------TSKESMRDMERR 160
                 4444444444444444444444444444444444444444444444443222211111111111111111111122233333334444444444444555555555555555555....................444444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2208  (0.161498); expected 273.4 (0.02)
Passed bias filter:                      788  (0.057636); expected 273.4 (0.02)
Passed Vit filter:                       156  (0.0114102); expected 13.7 (0.001)
Passed Fwd filter:                        77  (0.00563195); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              46  [number of targets reported over threshold]
# CPU time: 1.53u 0.33s 00:00:01.86 Elapsed: 00:00:00.65
# Mc/sec: 615.68
//
Query:       MMETSP1325-20131115|8053_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 859.07
//
Query:       MMETSP1325-20131115|8055_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.008   14.5   8.5     0.0093   14.3   5.9    1.0  1  PF13166.1  AAA domain
  ------ inclusion threshold ------
       0.29    9.8  16.4       0.34    9.6  11.4    1.0  1  PF14362.1  Domain of unknown function (DUF4407)
       0.32    9.5   3.3       0.35    9.3   2.3    1.0  1  PF02455.11 Hexon-associated protein (IIIa)
       0.42    8.1   6.1       0.46    8.0   4.3    1.0  1  PF05758.7  Ycf1
       0.63    9.0  22.3       0.69    8.9  15.5    1.0  1  PF09507.5  DNA polymerase subunit Cdc27
       0.74    8.2  15.0        0.9    7.9  10.4    1.0  1  PF04375.9  HemX
        1.3    7.5  12.4        1.6    7.1   8.6    1.0  1  PF07227.6  Protein of unknown function (DUF1423)
        1.9    8.6  15.3        2.4    8.2  10.6    1.2  1  PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
        4.1    6.8  12.3        5.7    6.3   8.5    1.2  1  PF04921.9  XAP5, circadian clock regulator


Domain annotation for each model (and alignments):
>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   5.9   6.1e-06    0.0093     376     466 ..      27     114 ..      22     134 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 6.1e-06
   PF13166.1 376 nelirkhNekidnlkeeknkakkklwlhlvaelkedideyekklkklekkinslekeleklekeikklekeikelekelkneeptaeeink 466
                  e+ r+ + k++  ++   +a+k+  +  +ae+ +++++++    + ++k++++ ++l+++++e+k+ e+++k+l+ke k++++ a+++ +
  MMETSP1325-20131115|8055_1  27 SEEEREAKAKAKAKAKAAAQAEKEAAQLKAAEAAQEMKAAQ---GGKDEKAKQAAAALKAKDQELKDAEARVKALKKEDKDAKKDAKKLKD 114
                 56667788888888888888888888888888888877666...555568899999999************************99999866 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  11.4   0.00022      0.34     133     226 ..      26     114 ..       9     121 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00022
   PF14362.1 133 lsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaeleankrkaaleeera 226
                 +s+++ +++a+ +a+ +++++a++e ++++++  ++++   ++   Gk++ +k++ +al+a+ +el++++a+++a ++e +    k++ ++ ++
  MMETSP1325-20131115|8055_1  26 DSEEEREAKAKAKAKAKAAAQAEKEAAQLKAAEAAQEM---KAAQGGKDEKAKQAAAALKAKDQELKDAEARVKALKKEDK--DAKKDAKKLKD 114
                 34455555555555566666666666665555555555...6789999999999999999999999999999888777766..44444444443 PP

>> PF02455.11  Hexon-associated protein (IIIa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.3   0.00023      0.35     363     446 ..      29     111 ..       7     129 .. 0.45

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00023
  PF02455.11 363 sevapeps.vaepssapslsessevlrsaldgrlaesrlpgeed.llapaaeknasnneleelvdklsrwktyaqelreleaseak 446
                 +e +++++  a++++a++ +++++ l++a   +   + ++g +d  ++ aa   a + + +el+d+ +r k+ ++e +++++ ++k
  MMETSP1325-20131115|8055_1  29 EEREAKAKaKAKAKAAAQAEKEAAQLKAAEAAQEM-KAAQGGKDeKAKQAAA--ALKAKDQELKDAEARVKALKKEDKDAKKDAKK 111
                 11111111011122223333333333322222222.2233333302222222..34666667777777777777776666655332 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   4.3    0.0003      0.46     236     315 ..      27     105 ..       3     125 .. 0.48

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0003
   PF05758.7 236 seeekkkeieaesekkrakqeqeeeeeedsslaseekedkdkideqeekkveekkekesilkkkisqekkkleilkelk..e 315
                 seee++++ +a+ ++k a+q ++e ++ +   a e +++ +  +  +++k +++    ++++++ ++ + +++ lk++    
  MMETSP1325-20131115|8055_1  27 SEEEREAKAKAKAKAKAAAQAEKEAAQLK---AAEAAQEMKAAQGGKDEKAKQAAAALKAKDQELKDAEARVKALKKEDkdA 105
                 33444444444444444433333332222...12222222233334444445554444455555555555555555433221 PP

>> PF09507.5  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  15.5   0.00045      0.69     148     260 ..       6     118 ..       1     124 [. 0.69

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00045
   PF09507.5 148 aaeaskalkktangka.......askpsksiaksevksksakktqdssketktektekktsvkaasskkkaseksnamssffkkktkekkkkkeaseskvkeeseeesekedkaeedesa 260
                 a+++     +  ++ +       + ++++  ak+++k k+++++q ++++++ +++e++++ kaa++ k ++++++a ++++  ++ +++k++ea+ ++ k+e ++++++ +k ++d+ a
  MMETSP1325-20131115|8055_1   6 APPT----MPKFDAPPmpsfggdSDSEEEREAKAKAKAKAKAAAQAEKEAAQLKAAEAAQEMKAAQGGK-DEKAKQAAAALK--AKDQELKDAEARVKALKKEDKDAKKDAKKLKDDACA 118
                 3333....2333333244566777888888888899999999999999999999999999999999997.344444443433..334667778889998899988888888888777766 PP

>> PF04375.9  HemX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  10.4   0.00059       0.9      54     125 ..      33     104 ..      22     112 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00059
   PF04375.9  54 qveelqaklealaqelkqlakakeaqlkqeleklirdnqealeqlekkleqldksleelqdkvaalegasrn 125
                  +++++ak +a aq  k+ a+ k a+ +qe++ +++ ++e+ +q+   l ++d++l++   +v al++ +++
  MMETSP1325-20131115|8055_1  33 AKAKAKAKAKAAAQAEKEAAQLKAAEAAQEMKAAQGGKDEKAKQAAAALKAKDQELKDAEARVKALKKEDKD 104
                 5678899999999999999999999*****************************************998655 PP

>> PF07227.6  Protein of unknown function (DUF1423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   8.6    0.0011       1.6     270     355 ..      26     112 ..      20     116 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0011
   PF07227.6 270 dssksleeeaekgrei.aaqeaerdeiaevvqeavkkkevvaeeklrllkkarvildaldreleekakevselkaerqkkkeqidel 355
                 ds ++ e++a+ + +  aa +ae++ +  ++ ea++++++ +  k +  k+a+++l+a d+el++   +v+ lk+e ++ k++ ++l
  MMETSP1325-20131115|8055_1  26 DSEEEREAKAKAKAKAkAAAQAEKEAAQLKAAEAAQEMKAAQGGKDEKAKQAAAALKAKDQELKDAEARVKALKKEDKDAKKDAKKL 112
                 4444555544443333356666668888899999********9*********************************99999988877 PP

>> PF08028.6  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  10.6    0.0016       2.4      21      86 ..      34      96 ..      27     111 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0016
                HHTT-B-S----B----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHH CS
   PF08028.6 21 rarervraaggaklaedpatqlrlAeaaaeldaAralleraaerlealadrgaevtpeeraearrd 86
                +a+++++ a++a++ae++a+ql+ Aeaa e++aA+   ++ a+++ a+ +++++  + + aear++
  MMETSP1325-20131115|8055_1 34 KAKAKAK-AKAAAQAEKEAAQLKAAEAAQEMKAAQGGKDEKAKQAAAALKAKDQ--ELKDAEARVK 96
                3444444.8899*******************************97777665554..4555555554 PP

>> PF04921.9  XAP5, circadian clock regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   8.5    0.0037       5.7      12      87 ..      20     101 ..      15     121 .. 0.55

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0037
   PF04921.9  12 SFgedeeeeeeeeeeeekeeeekeeeeteeenknkkdkkkkk...kkkigknpsvdts..flpdkereekeeekr.eelrke 87 
                 SFg d + eee e++ + ++++k  ++ e+e ++ k++++++    ++ gk+++++     l+ k++e k++e+r ++l+ke
  MMETSP1325-20131115|8055_1  20 SFGGDSDSEEEREAKAKAKAKAKAAAQAEKEAAQLKAAEAAQemkAAQGGKDEKAKQAaaALKAKDQELKDAEARvKALKKE 101
                 7887777766644444444444444333333333333332222337788899999887445666666666666652344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2182  (0.159596); expected 273.4 (0.02)
Passed bias filter:                      923  (0.0675102); expected 273.4 (0.02)
Passed Vit filter:                       200  (0.0146284); expected 13.7 (0.001)
Passed Fwd filter:                        50  (0.00365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.85u 0.42s 00:00:01.27 Elapsed: 00:00:00.62
# Mc/sec: 521.79
//
Query:       MMETSP1325-20131115|8059_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        63  (0.00460796); expected 273.4 (0.02)
Passed bias filter:                       59  (0.00431539); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|8060_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   13.1   0.3        9.4    5.8   0.0    2.3  2  PF12151.3 Mannan-binding protein


Domain annotation for each model (and alignments):
>> PF12151.3  Mannan-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0   0.00082        11       4      17 ..       4      17 ..       2      18 .. 0.88
   2 ?    5.8   0.0   0.00069       9.4       4      17 ..      36      49 ..      33      50 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.00082
                HHH---HHHHCT-- CS
   PF12151.3  4 AqavCPtvCaalgg 17
                A+ v+ +vC+++gg
  MMETSP1325-20131115|8060_1  4 ASVVGRGVCGGIGG 17
                788999*******9 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.00069
                HHH---HHHHCT-- CS
   PF12151.3  4 AqavCPtvCaalgg 17
                A+ v+ +vC+++gg
  MMETSP1325-20131115|8060_1 36 ASVVGRGVCGGIGG 49
                888999*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|8063_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-05   22.8   4.8    5.1e-05   22.8   3.3    1.0  1  PF04156.9  IncA protein
    0.00051   19.7   8.3    0.00054   19.6   5.7    1.0  1  PF12718.2  Tropomyosin like
     0.0011   18.1   2.7     0.0012   18.0   1.8    1.0  1  PF11932.3  Protein of unknown function (DUF3450)
     0.0014   18.9   1.2     0.0018   18.5   0.9    1.2  1  PF13600.1  N-terminal domain of unknown function (DUF4140)
      0.002   17.8   3.4     0.0021   17.7   2.3    1.1  1  PF06009.7  Laminin Domain II
     0.0026   17.1   4.8     0.0026   17.1   3.3    1.0  1  PF00038.16 Intermediate filament protein
      0.003   16.8   1.6      0.003   16.8   1.1    1.1  1  PF05791.6  Bacillus haemolytic enterotoxin (HBL)
     0.0078   13.8   5.7     0.0075   13.9   3.9    1.0  1  PF01576.14 Myosin tail
     0.0078   15.3   5.0     0.0083   15.2   3.4    1.1  1  PF13851.1  Growth-arrest specific micro-tubule binding
     0.0099   15.5   5.4      0.011   15.4   3.8    1.1  1  PF08614.6  Autophagy protein 16 (ATG16)
  ------ inclusion threshold ------
       0.01   13.0   4.7      0.011   12.9   3.2    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
      0.013   13.6   4.1      0.014   13.6   2.8    1.0  1  PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
      0.015   14.4   3.7      0.018   14.2   2.5    1.1  1  PF12795.2  Mechanosensitive ion channel porin domain
      0.017   14.2   0.4      0.017   14.2   0.3    1.0  1  PF04582.7  Reovirus sigma C capsid protein
       0.02   12.9   6.6       0.02   12.9   4.5    1.0  1  PF05557.8  Mitotic checkpoint protein
       0.02   15.0   1.0      0.032   14.3   0.7    1.5  1  PF05531.7  Nucleopolyhedrovirus P10 protein
      0.021   13.2   4.2      0.022   13.1   2.9    1.0  1  PF05667.6  Protein of unknown function (DUF812)
      0.023   14.5   1.1      0.023   14.5   0.8    2.2  2  PF00170.16 bZIP transcription factor
      0.024   14.2   4.2      0.034   13.7   2.9    1.4  1  PF07926.7  TPR/MLP1/MLP2-like protein
      0.024   13.0   4.9      0.024   13.0   3.4    1.0  1  PF13166.1  AAA domain
      0.026   14.5   2.9      0.032   14.2   2.0    1.2  1  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
       0.03   14.0   8.9      0.027   14.1   4.1    2.0  2  PF12329.3  TATA element modulatory factor 1 DNA binding
      0.031   12.8   4.8       0.03   12.8   3.3    1.0  1  PF08317.6  Spc7 kinetochore protein
      0.032   14.0   2.8      0.037   13.8   1.9    1.1  1  PF04645.7  Protein of unknown function, DUF603
      0.032   14.2   4.5      0.037   14.0   3.1    1.1  1  PF05008.10 Vesicle transport v-SNARE protein N-terminus
      0.035   12.1   1.8      0.039   11.9   1.3    1.0  1  PF06419.6  Conserved oligomeric complex COG6
      0.038   12.5   2.7      0.042   12.4   1.9    1.0  1  PF10498.4  Intra-flagellar transport protein 57
      0.042   13.7   5.2      0.056   13.3   3.6    1.3  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.05   12.7   3.1       0.19   10.8   2.2    1.7  1  PF06717.6  Protein of unknown function (DUF1202)
      0.064   12.6   9.3       0.22   10.9   1.7    2.1  2  PF04977.10 Septum formation initiator
      0.068   12.9   5.4       0.19   11.5   0.4    2.0  2  PF13863.1  Domain of unknown function (DUF4200)
      0.073   13.0   5.2       0.23   11.4   1.5    2.0  2  PF12709.2  Central kinetochore-associated
      0.083   12.2   4.7       0.21   10.9   3.3    1.6  1  PF13870.1  Domain of unknown function (DUF4201)
        0.1   11.9   3.2       0.12   11.7   2.2    1.1  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
       0.11   12.7   3.1       0.23   11.7   2.2    1.6  1  PF04102.7  SlyX
       0.12   12.1   1.5       0.78    9.5   1.1    1.9  1  PF08700.6  Vps51/Vps67
       0.13   11.0   3.6       0.15   10.9   2.5    1.1  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.13   12.1   3.0       0.24   11.2   2.1    1.5  1  PF03245.8  Bacteriophage lysis protein
       0.15   11.9   3.6       0.12   12.2   1.2    1.6  2  PF14197.1  Centrosome localisation domain of PPC89
       0.15   11.8   4.8       0.17   11.6   3.3    1.1  1  PF11559.3  Afadin- and alpha -actinin-Binding
       0.15   12.2   3.9       0.18   12.0   2.7    1.2  1  PF00435.16 Spectrin repeat
       0.17   11.6   3.7        0.3   10.8   1.7    1.8  2  PF05377.6  Flagella accessory protein C (FlaC)
       0.19   10.8   2.7       0.18   10.8   1.9    1.2  1  PF10234.4  Clusterin-associated protein-1
        0.2   11.5   5.4       0.29   11.0   3.7    1.4  1  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
        0.2   11.8   2.8       0.22   11.7   1.9    1.2  1  PF06156.8  Protein of unknown function (DUF972)
       0.21   11.2   1.5       0.24   11.1   1.0    1.2  1  PF07889.7  Protein of unknown function (DUF1664)
       0.21   11.7   1.8       0.26   11.4   1.3    1.1  1  PF01519.11 Protein of unknown function DUF16
       0.23   10.8   2.5        0.5    9.7   0.2    2.3  2  PF05082.8  Rop-like
       0.23   11.1   5.6       0.26   11.0   3.8    1.1  1  PF10211.4  Axonemal dynein light chain
       0.25   10.2   2.3       0.27   10.1   1.6    1.0  1  PF07851.8  TMPIT-like protein
       0.27   11.1   4.1       0.34   10.8   2.8    1.2  1  PF11068.3  Protein of unknown function (DUF2869)
       0.27   11.4   7.7       0.83    9.8   5.2    1.8  1  PF06005.7  Protein of unknown function (DUF904)
       0.29   10.7   4.7       0.35   10.4   3.3    1.2  1  PF08286.6  Spc24 subunit of Ndc80
       0.29   11.3   3.4       0.32   11.1   2.4    1.1  1  PF08232.7  Striatin family
       0.33   10.4   4.5       0.52    9.8   3.1    1.4  1  PF03962.10 Mnd1 family
       0.36   10.7   3.0        2.7    7.9   1.1    2.3  2  PF08663.5  HalX domain
       0.41   10.0   6.4       0.52    9.7   4.4    1.2  1  PF01025.14 GrpE
       0.43   10.6   5.1       0.53   10.3   3.0    1.6  1  PF13747.1  Domain of unknown function (DUF4164)
       0.44   10.2   7.3       0.51   10.0   5.1    1.2  1  PF00430.13 ATP synthase B/B' CF(0)
       0.65    8.7   3.0       0.77    8.4   2.1    1.2  1  PF14362.1  Domain of unknown function (DUF4407)
       0.87    9.0   4.5       0.89    9.0   3.1    1.1  1  PF05266.9  Protein of unknown function (DUF724)
        1.1    7.9   5.4        1.1    7.9   3.7    1.0  1  PF04111.7  Autophagy protein Apg6
        6.1    6.7   7.8        4.2    7.2   0.9    2.0  2  PF10779.4  Haemolysin XhlA


Domain annotation for each model (and alignments):
>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   3.3   2.3e-07   5.1e-05      96     157 ..       3      65 ..       1      70 [] 0.86

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 2.3e-07
   PF04156.9  96 eleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr.eeisdlk 157
                 ++  le ++a   +++++leed ++l++ + +++ +l +++ +ik++++ei+++  + + ++k
  MMETSP1325-20131115|8063_1   3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGkQLLAQAK 65 
                 67889*************************************************933333333 PP

>> PF12718.2  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   5.7   2.5e-06   0.00054       1      63 [.       3      66 ..       3      70 .] 0.88

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 2.5e-06
   PF12718.2  1 KlnalklEaenaqekaeeleeklKeleqenekkEeeiksLqkKnqqlEeevekleeql.keake 63
                K+ +l +E+   ++ ++elee++K+l+ + ++k++e+ + +  ++ +++e+e + +ql  +ak+
  MMETSP1325-20131115|8063_1  3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLlAQAKQ 66
                677888999999******************************************9997245555 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   1.8   5.6e-06    0.0012      43      99 ..       2      58 ..       1      64 [. 0.95

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 5.6e-06
   PF11932.3 43 kkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeiee 99
                +k+++l++++++ l +i++l+e+v++l+   dq ++++ + ++e+++++ +ie++ +
  MMETSP1325-20131115|8063_1  2 AKVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGK 58
                68999************************************************9865 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.9   8.4e-06    0.0018      48     101 ..       2      54 ..       1      57 [. 0.88

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 8.4e-06
   PF13600.1  48 atvlsvsvrrrdlqekdadaaseelaeleaelraledelarleaekealearia 101
                 a+v++++ +++++   d+++ +e++++l+ ++++ ++el +++ae++a +++i+
  MMETSP1325-20131115|8063_1   2 AKVANLEAENARHL-DDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIE 54 
                 57777887777665.699********************************9986 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   2.3   9.9e-06    0.0021      18      76 ..       3      61 ..       1      70 [] 0.87

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 9.9e-06
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7 18 elegistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkLk 76
                ++++++++  +  +++++l+++v++ n k  ++n  + +a+ ++++++ +++++ ++L 
  MMETSP1325-20131115|8063_1  3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLL 61
                57788888899999**************************************9999874 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   3.3   1.2e-05    0.0026     195     259 ..       2      66 ..       1      70 [] 0.84

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.2e-05
  PF00038.16 195 akleelqeeaeknsealrsakeeitelrrqiqsleieleslkkqkeslerqlaeleerleeelkk 259
                 ak+++l+ e++++ +++++ +e++++l+ + ++ + el +  ++ ++++ +++++ ++l +++k+
  MMETSP1325-20131115|8063_1   2 AKVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAKQ 66 
                 68899999999999999999999999999999999999999999999999999988888777765 PP

>> PF05791.6  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   1.1   1.4e-05     0.003     133     178 ..      15      59 ..       3      65 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 1.4e-05
   PF05791.6 133 LkafknklakdtksfksdvdeltsiLksqgadieklkkeieklqee 178
                 L ++k +l++d+k+++s+ d+ +  L +++a+i++++ eie++ ++
  MMETSP1325-20131115|8063_1  15 LDDIK-ELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQ 59 
                 55554.69*********************************98776 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   3.9   3.4e-05    0.0075     174     229 ..      10      65 ..       1      70 [] 0.68

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.4e-05
  PF01576.14 174 akleaekkakqlesqlselkvkldelqrqlndltskksrlqsEnseLtrqleeaea 229
                 + + +   +k+le+ +++l++k d+ +r+l + +++ + ++sE +++ +ql ++  
  MMETSP1325-20131115|8063_1  10 ENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAK 65 
                 44444445778888888888888888888888888888888888888888765544 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   3.4   3.8e-05    0.0083      25      70 ..      14      59 ..       3      69 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 3.8e-05
   PF13851.1 25 nLelIkslkeeiaelkkkeekneklmaeikkenkrlkepLkkaeee 70
                +L+ Ik+l+e++++l+ k +++++++ e ++e+k ++ +++ + ++
  MMETSP1325-20131115|8063_1 14 HLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQ 59
                6888999999999999999999999999999999999999887665 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   3.8     5e-05     0.011      83     143 ..       4      64 ..       1      69 [. 0.63

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 5e-05
   PF08614.6  83 laelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkeke 143
                 +a+l  ++++    + +l+e++++++ +  +k++el e ++eik+ + ei+d  ++l ++ 
  MMETSP1325-20131115|8063_1   4 VANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQA 64 
                 5666666666666666777777777777777777777777777777777777666665554 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.2   5.2e-05     0.011     478     538 ..       4      64 ..       1      67 [. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.2e-05
   PF12128.3 478 lekaqeelekaeaevealqseeeqlrkkrdealealqkaerrleelrealeeleeqllPqa 538
                 + + ++e   + ++ ++l+++ +ql++k+d+ +++l +a+++++   +++e++ +qll+qa
  MMETSP1325-20131115|8063_1   4 VANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQA 64 
                 5566777788889999999999999999999999999999999999999999999999997 PP

>> PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.8   6.3e-05     0.014     210     270 ..       6      63 ..       1      69 [. 0.71

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 6.3e-05
   PF07888.6 210 iLsaqraenrerileLeddiqtlskkvreqeklleqlkeikaelerekaelkqrlkektvq 270
                  L+a++a + + i+eLe+d++ l+ k  ++++ l++    +ae   +++e+++  k+  +q
  MMETSP1325-20131115|8063_1   6 NLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGE---ANAEIKAMNSEIEDVGKQLLAQ 63 
                 5899***********************877777764...3445555555555444444444 PP

>> PF12795.2  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.5   8.3e-05     0.018      30     136 ..      15      60 ..       2      69 .. 0.52

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 8.3e-05
   PF12795.2  30 ldeikkskqkadqyqkiiddapkelrelrqelealksaeeavkqelanlslsqLeqelaqtssqLqelqeqlqqensqlielqtrperaqqqlsearrrlqeienrL 136
                 ld+ik+ +++ +q++ + d+  +el e+++e++a++s+                                                             ++++ ++L
  MMETSP1325-20131115|8063_1  15 LDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSE-------------------------------------------------------------IEDVGKQL 60 
                 55555555555555555555555555555555555544.............................................................33333333 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.3   7.7e-05     0.017      36      91 ..       3      58 ..       1      69 [. 0.89

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 7.7e-05
   PF04582.7 36 rltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqs 91
                ++++lea +a   + ++++ +++ +l++++++  + l++++ae+k +++e++ + +
  MMETSP1325-20131115|8063_1  3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGK 58
                6789******9999***********************************9988755 PP

>> PF05557.8  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   4.5   9.1e-05      0.02      94     160 ..       3      68 ..       1      70 [] 0.88

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.1e-05
   PF05557.8  94 kastlaeeyekeldknleLevklkaleekekkaeneaeeaeeeakllkkkldaekkklqkekedqlk 160
                 k+ +l+ e  + ld  +eLe ++k+l+ k  + + e+ ea++e+k+++ +++ + k+l   +++q +
  MMETSP1325-20131115|8063_1   3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQL-LAQAKQRA 68 
                 567888889999*********************************************9.66665554 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.7   0.00015     0.032      26      63 ..      14      51 ..       2      66 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 0.00015
   PF05531.7 26 qvddvqenlpdvtelnekLdaqsaqLaeletkvenIqd 63
                ++dd++e  +dv++ln+k+d+ + +L e ++++++ ++
  MMETSP1325-20131115|8063_1 14 HLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNS 51
                56888888899999999999999999999988876654 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.9    0.0001     0.022     315     372 ..       3      60 ..       1      69 [. 0.74

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 0.0001
   PF05667.6 315 evkteedrtkerekelealqeqidelessieeveeeikalkskikeveeeleevkeen 372
                 +v++ e++++ +  ++++l+e +++l+s+ ++ ++e  + +++ik++++e+e v ++ 
  MMETSP1325-20131115|8063_1   3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQL 60 
                 5667777778888888888888888888888888888888888888888888776654 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.8    0.0001     0.023      33      62 ..       2      31 ..       1      33 [. 0.93
   2 ?    9.5   2.5    0.0038      0.82      23      63 ..      13      53 ..      12      67 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 0.0001
                HHHHHHHHHH.......HHHHHHHHHHHHH CS
  PF00170.16 33 ekvkeLeaeNkaLkkeleelkkevaklkse 62
                 kv++LeaeN +  + ++el++ v++l s+
  MMETSP1325-20131115|8063_1  2 AKVANLEAENARHLDDIKELEEDVKQLNSK 31
                69*************************987 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.0038
                HHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHH CS
  PF00170.16 23 RKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                R +  i+eLee vk+L ++ ++   el e + e++++ se+
  MMETSP1325-20131115|8063_1 13 RHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEI 53
                677789**********9988877777777777777777765 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   2.9   0.00016     0.034      67     110 ..      17      60 ..       2      69 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 0.00016
   PF07926.7  67 elaelqkeaselrkeadsakaelneleekweeeksmLevelsel 110
                 + +el++++++l++++d++++el e++++++   s++e+  ++l
  MMETSP1325-20131115|8063_1  17 DIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQL 60 
                 67789999999999999999999999999999999988755544 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.4   0.00011     0.024      89     453 ..       9      59 ..       1      69 [. 0.43

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00011
   PF13166.1  89 eenkeiekeieelkkelkkleekleelekelekkekekekakaklkekawkklakkkeselkealkglkkkknykekllkelkseeikkssllsdeelkakikalkesekpeialltlsvpeldeiekteilekkivgkadsaieelienlgnsdWVkeGlelheegdtCpFCqqetlteerkeeLeahFdeefeelkekleellekleskieklleelesilseekensefkedveelkaelealeeeleklekaleeKlkdpfsslelesiadeieeinelvdkinelirkhNekidnlkeeknkakkklwlhlvaelkedideyekklkklekkinslekeleklekeikklekeikeleke 453
                  en+++                                                                                                                                                                                                                                                                                                                           +di+e+e+++k+l+ k  ++++el ++++eik+ ++ei++  k+
  MMETSP1325-20131115|8063_1   9 AENARHL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQ 59 
                 3333333..........................................................................................................................................................................................................................................................................................................................34444444444444444444444444444444444444444333 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.0   0.00015     0.032      23      77 ..       4      55 ..       1      65 [. 0.72

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 0.00015
   PF10046.4 23 lklLeklNeataekykeleqkakslekeleklkqkyeelkpylqqideieeqvtk 77
                +  Le  N +  + +kele+ +k+l+++++++   + el +  ++i+++++++++
  MMETSP1325-20131115|8063_1  4 VANLEAENARHLDDIKELEEDVKQLNSKFDQK---NRELGEANAEIKAMNSEIED 55
                66799999999999999999999999887655...55555555555555555554 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   4.1   0.00012     0.027      21      69 ..       4      52 ..       1      56 [. 0.85
   2 ?    6.1   0.4      0.04       8.7      11      32 ..      43      64 ..      38      69 .. 0.53

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 0.00012
   PF12329.3 21 gekLskkelkhnntikkLrkknkelekeieelkkkleklekeleeleer 69
                  +L++++++h   ik+L +++k+l+++ ++ +++l + ++e+  ++++
  MMETSP1325-20131115|8063_1  4 VANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSE 52
                5689999999999999999999999999999999999999999988776 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.04
   PF12329.3 11 deqIaqLmeEgekLskkelkhn 32
                +++I++  +E+e+  k+ l++ 
  MMETSP1325-20131115|8063_1 43 NAEIKAMNSEIEDVGKQLLAQA 64
                4555555555555555555544 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   3.3   0.00014      0.03     210     265 ..       8      65 ..       1      70 [] 0.53

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 0.00014
   PF08317.6 210 eleklr..eeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaek 265
                 e e++r  +++++lee++++ ++k  +++ el e +++i+a +++++++ +++ ++ k
  MMETSP1325-20131115|8063_1   8 EAENARhlDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAK 65 
                 4444442235555566666666666666666666666666666666665555554444 PP

>> PF04645.7  Protein of unknown function, DUF603
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.9   0.00017     0.037     104     153 ..       8      59 ..       2      67 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 0.00017
   PF04645.7 104 slelksmlskiedlrskidsldkkinkknlkv..vdeeleslkleldelike 153
                 + e + +l +i++l+ +++ l+ k  +kn++   ++ e++ + +e++++ k+
  MMETSP1325-20131115|8063_1   8 EAENARHLDDIKELEEDVKQLNSKFDQKNRELgeANAEIKAMNSEIEDVGKQ 59 
                 667788999*******************9987225666********999876 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   3.1   0.00017     0.037       3      63 ..       6      68 ..       4      70 .] 0.86

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 0.00017
  PF05008.10  3 ellaeikrklaslsklsge..erkaalreiekkldeaeellkqMelEvrnlpsserakykakl 63
                +l ae  r+l+++++l+ +  + +++  +  ++l ea++ +k M  E++++ ++  a+ k++ 
  MMETSP1325-20131115|8063_1  6 NLEAENARHLDDIKELEEDvkQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAKQRA 68
                5677888999****99864459999999999********************989999888875 PP

>> PF06419.6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.3   0.00018     0.039      46      92 ..      17      64 ..      10      69 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00018
   PF06419.6 46 qlkrieetieklnetceemkkqlekakqktkdlleeaselkeq.keki 92
                 +k++ee++++ln+ +++ +++l +a+++ k++++e++++ +q  +++
  MMETSP1325-20131115|8063_1 17 DIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQlLAQA 64
                699*************************************99833444 PP

>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.9   0.00019     0.042     246     295 ..       7      59 ..       2      69 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00019
   PF10498.4 246 lsqdlskalekiekrE...kqlnnqleelvqeykeareelsevqekynqlsks 295
                 l+++ ++ l+ i+++E   kqln++++++ +e+ ea++e++ ++ +++ + k+
  MMETSP1325-20131115|8063_1   7 LEAENARHLDDIKELEedvKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQ 59 
                 45555555555555553333455555555555555555555555555444333 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   3.6   0.00026     0.056      24      68 ..      11      55 ..       2      69 .. 0.62

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.00026
                THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT..HH CS
  PF02403.17 24 dkedvdelleldeerrelqveleelqaerNelskeIgkakkkked 68
                ++  +d++ el+e +++l++++++ ++e  e+++eI+ + ++ ed
  MMETSP1325-20131115|8063_1 11 NARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIED 55
                345566777777777777777777777777777777666655544 PP

>> PF06717.6  Protein of unknown function (DUF1202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.2   0.00089      0.19     117     174 ..      13      66 ..       2      69 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00089
   PF06717.6 117 rviddiktndkylivnsedfnyrfsalkseyarkkssinelekdvkaldkkivvakke 174
                 r +ddik     l  + +++n +f++ + e+ + +++i++++ +++ + k++++  k+
  MMETSP1325-20131115|8063_1  13 RHLDDIKE----LEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAKQ 66 
                 45555543....4456778888899989999999999999999999999998887765 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.7     0.001      0.22      24      53 ..       2      30 ..       1      34 [. 0.89
   2 ?   10.2   1.7    0.0016      0.35      19      50 ..      25      56 ..      24      69 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.001
  PF04977.10 24 qeiaalqaelaklkaeneeLeaevkdLksd 53
                +++a l+ae+a+  ++++eLe+ vk+L+ +
  MMETSP1325-20131115|8063_1  2 AKVANLEAENARHLDDIKELEEDVKQLN-S 30
                6899***********************5.4 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.0016
  PF04977.10 19 lyqlkqeiaalqaelaklkaeneeLeaevkdL 50
                ++ql+++ +++++el + +ae++++ +e++d 
  MMETSP1325-20131115|8063_1 25 VKQLNSKFDQKNRELGEANAEIKAMNSEIEDV 56
                689**************************997 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.4       0.1        22      74      96 ..       9      31 ..       1      34 [. 0.51
   2 ?   11.5   0.4   0.00089      0.19       2      34 ..      32      64 ..      31      69 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.1
   PF13863.1 74 kekkekeeeikklkaqleelkae 96
                 e+     +ik+l++++++l+++
  MMETSP1325-20131115|8063_1  9 AENARHLDDIKELEEDVKQLNSK 31
                33334445566666666666555 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00089
   PF13863.1  2 llekkremeevqlaldakreeierkeeelkere 34
                + +k+re+ e++++++a+++eie+  ++l ++ 
  MMETSP1325-20131115|8063_1 32 FDQKNRELGEANAEIKAMNSEIEDVGKQLLAQA 64
                557889999999999999999987766665554 PP

>> PF12709.2  Central kinetochore-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   1.0     0.057        12      51      78 ..       4      34 ..       1      39 [. 0.44
   2 ?   11.4   1.5     0.001      0.23      33      80 ..      22      68 ..      22      70 .] 0.82

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.057
   PF12709.2 51 ldelelenkalkeeieqLkk...qleaerke 78
                + +le en    ++i++L++   ql+++ ++
  MMETSP1325-20131115|8063_1  4 VANLEAENARHLDDIKELEEdvkQLNSKFDQ 34
                5555555555555555555311123333333 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 0.001
   PF12709.2 33 EqKVkaLkKsYeakyekkldelelenkalkeeieqLkkqleaerkekq 80
                E  Vk+L   +++k + +l e++ e ka++ eie + kql a+ k++ 
  MMETSP1325-20131115|8063_1 22 EEDVKQLNSKFDQK-NRELGEANAEIKAMNSEIEDVGKQLLAQAKQRA 68
                56688888667666.56688899999**************99999885 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   3.3   0.00095      0.21      40      72 ..      14      46 ..       3      67 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00095
   PF13870.1 40 hlvdfeqlqienqalnekieernkeLkkLkkkt 72
                hl+d + l+ ++++ln k++++n eL +    +
  MMETSP1325-20131115|8063_1 14 HLDDIKELEEDVKQLNSKFDQKNRELGEANAEI 46
                899999999999999999999999997665555 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.2   0.00056      0.12      72     110 ..      16      54 ..       2      69 .. 0.55

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00056
   PF07106.8  72 eelnkldaeieelreevqelkqeiselekelkkLtselt 110
                  ++++l++++++l+++  + ++e  e+++e+k+++se +
  MMETSP1325-20131115|8063_1  16 DDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIE 54 
                 345555555555555555555555555555555555542 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.2    0.0011      0.23       7      55 ..       5      52 ..       1      69 [. 0.54

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.0011
   PF04102.7  7 eeLEiklafqedtieeLNevvaeqqkeidrlqrqlrllaerlkeleess 55
                ++LE + a + d i eL e v + + + d+ +r+l   + ++k+++ s+
  MMETSP1325-20131115|8063_1  5 ANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMN-SE 52
                5566666665555566555555555555555555555555555555.22 PP

>> PF08700.6  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.1    0.0036      0.78      22      75 ..       5      61 ..       2      69 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0036
   PF08700.6 22 kellkveaklrseiraldselkal...VydnYskLisasdtIrkmksemekldpkls 75
                + l + +a+ + +i++l+++ k+l     ++ ++L +a+ +I+ m+se+e++ ++l 
  MMETSP1325-20131115|8063_1  5 ANLEAENARHLDDIKELEEDVKQLnskFDQKNRELGEANAEIKAMNSEIEDVGKQLL 61
                556666777778888888888888333346789999999999999999999877764 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.5   0.00067      0.15      61     109 ..       7      56 ..       2      69 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00067
   PF10186.4  61 lklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.a 109
                 l +e a++ ++i+++ + ++ql+++ +qk++++ e  ++++  +s +e  
  MMETSP1325-20131115|8063_1   7 LEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEdV 56 
                 56677777788888888888888888888888888888888877777733 PP

>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   2.1    0.0011      0.24      15      68 ..       6      63 ..       1      69 [. 0.65

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.0011
   PF03245.8 15 eleaan.aeiedlqarqravaeldakhte...eLadaksendrLradvaaGrrRLrvk 68
                +lea+n + ++d+++++ +v +l+ k+ +   eL +a++e+++++ ++ +  ++L  +
  MMETSP1325-20131115|8063_1  6 NLEAENaRHLDDIKELEEDVKQLNSKFDQknrELGEANAEIKAMNSEIEDVGKQLLAQ 63
                4555553456777777777777777775433378888888888877777766666655 PP

>> PF14197.1  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       8.8   1.9e+03      52      57 ..       7      12 ..       2      20 .. 0.52
   2 ?   12.2   1.2   0.00053      0.12       2      41 ..      20      59 ..      19      64 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 8.8
   PF14197.1 52 Lkaeve 57
                L ae++
  MMETSP1325-20131115|8063_1  7 LEAENA 12
                333333 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 0.00053
   PF14197.1  2 rLeaevktLrnrldsltrkvqvheielksLnkErdsalrq 41
                 Le+ vk+L  + d+ +r+++ +  e+k++n E + + +q
  MMETSP1325-20131115|8063_1 20 ELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQ 59
                6999999999999999999999999999999997665555 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   3.3   0.00079      0.17      63     124 ..       6      53 ..       1      69 [. 0.43

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00079
   PF11559.3  63 kleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlknii 124
                 +leae++r   +i+ l++ ++ql ++ ++ +++  ++++++k  ++               i
  MMETSP1325-20131115|8063_1   6 NLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSE--------------I 53 
                 44444444444444444444444444444444444444444433332..............2 PP

>> PF00435.16  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   2.7   0.00081      0.18      38      99 ..       6      67 ..       1      70 [] 0.57

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00081
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00435.16 38 allkkhkaleaelaaqqervealnelaeklideghsaseeieerleelnerWeeLlelaaer 99
                +l+ +  ++ +++++ +e v++ln   ++   e ++a+ ei+++ +e+++  ++Ll++a++r
  MMETSP1325-20131115|8063_1  6 NLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAKQR 67
                45555555556666666666666633333334445666777777777777777777777666 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.3    0.0083       1.8      15      40 ..       3      28 ..       1      30 [. 0.91
   2 ?   10.8   1.7    0.0014       0.3       2      40 ..      18      56 ..      17      62 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0083
   PF05377.6 15 vvatvrkeleelsksvekikenvkdv 40
                +va++++e+    +++ +++e+vk++
  MMETSP1325-20131115|8063_1  3 KVANLEAENARHLDDIKELEEDVKQL 28
                799********************986 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.0014
   PF05377.6  2 ideLEnklsklstvvatvrkeleelsksvekikenvkdv 40
                i+eLE+++ +l+++ +   +el e  +++  ++ ++ dv
  MMETSP1325-20131115|8063_1 18 IKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDV 56
                89************8888888888888888888888665 PP

>> PF10234.4  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.9   0.00084      0.18     173     218 ..       6      51 ..       1      67 [. 0.83

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00084
   PF10234.4 173 elaeelqklkaelenlksdeanLeekiekkkqelertqkrLkalqs 218
                 +l++e ++  + +++l++d ++L++k ++k+ el  ++  +ka++s
  MMETSP1325-20131115|8063_1   6 NLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNS 51 
                 5555566667889999999999999999999999999999988875 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.7    0.0013      0.29      49      87 ..       3      41 ..       1      69 [. 0.69

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0013
   PF13094.1 49 eirreeaelekdeekleeLeknakalererkeesknlhp 87
                 +++ eae+++ ++ ++eLe+++k+l ++  +++++l +
  MMETSP1325-20131115|8063_1  3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGE 41
                577889999999999999999999999998888887533 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.9     0.001      0.22       7      56 ..      15      64 ..       2      70 .] 0.70

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.001
   PF06156.8  7 fdklseleeqleelleeleelkkelkelleenaelkleneklrerleele 56
                +d ++elee++++l++++++  +el e   e ++++ e+e + ++l  ++
  MMETSP1325-20131115|8063_1 15 LDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQA 64
                57788899999998888887777777777777777777766666554443 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.0    0.0011      0.24      63     104 ..      18      59 ..       2      67 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.0011
   PF07889.7  63 kkhLsqridnlddkldeqkeiskeikeevteiredlsaiked 104
                  k+L + +++l++k d+++    e + e++ +++++++++++
  MMETSP1325-20131115|8063_1  18 IKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQ 59 
                 355666666666666666666666666666666666665554 PP

>> PF01519.11  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.3    0.0012      0.26      50      92 ..      20      62 ..       2      69 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0012
  PF01519.11 50 aqgeqikkltetvekqgeqikelqveqkaqgetlqlilktlek 92
                  +e +k+l  + ++++ ++ e ++e+ka+++ ++ ++k+l  
  MMETSP1325-20131115|8063_1 20 ELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLA 62
                4466677777777778888888889999999888888887754 PP

>> PF05082.8  Rop-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.2    0.0023       0.5       2      21 ..      16      35 ..      15      40 .. 0.84
   2 ?    1.3   0.2      0.99   2.2e+02      56      64 ..      42      50 ..      33      69 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0023
                ---HHHHHHHHHHHHHHHHH CS
   PF05082.8  2 edieelkkevkkLnskAtqa 21
                +di+el++ vk+Lnsk  q 
  MMETSP1325-20131115|8063_1 16 DDIKELEEDVKQLNSKFDQK 35
                59*************97665 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.99
                HHHHH.... CS
   PF05082.8 56 akkeLkale 64
                a++e+ka++
  MMETSP1325-20131115|8063_1 42 ANAEIKAMN 50
                444444433 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.8    0.0012      0.26     123     178 ..       5      59 ..       1      69 [. 0.73

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0012
   PF10211.4 123 selekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadeiaflkkq 178
                 ++le+e+++  ++++eLe+ vk+l++k ++ +++   e ++e k +++ei+ + kq
  MMETSP1325-20131115|8063_1   5 ANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELG-EANAEIKAMNSEIEDVGKQ 59 
                 688999999999999999999999999998766555.5566677788888776555 PP

>> PF07851.8  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.6    0.0012      0.27      13      74 ..       4      65 ..       1      69 [. 0.85

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0012
   PF07851.8 13 fkeleethkkykqkleeleklqekcasaikkqkkrlkelkkslkklkkkltkeekekvekle 74
                + +le  ++++ ++++ele+  ++  s+ ++++++l e  +++k +++++++  k+++++ +
  MMETSP1325-20131115|8063_1  4 VANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAK 65
                67899999999999999999999999999999999999999999999988877777777665 PP

>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.8    0.0016      0.34      25      85 ..       7      66 ..       2      69 .. 0.57

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.0016
   PF11068.3 25 lqeqleqleqelqqLefqkkkalkeikkqsaqqieeiqqqvekekakreeqkkqllqqleq 85
                l+++  +  +++++Le++ k++ +++ +++  ++ e++ ++++  +++e+  kqll q +q
  MMETSP1325-20131115|8063_1  7 LEAENARHLDDIKELEEDVKQLNSKFDQKN-RELGEANAEIKAMNSEIEDVGKQLLAQAKQ 66
                445555555556666666666666666555.566666666666666666666666666555 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.2    0.0038      0.83       8      60 ..       6      55 ..       4      69 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0038
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TT CS
   PF06005.7  8 eLeskiqqAvdtialLqmeieeLkeeneqlkeeneeLeeenkklkeereawqe 60
                 Le+  ++ +d i+ L++ +++L ++     ++n+eL e n   k   +++++
  MMETSP1325-20131115|8063_1  6 NLEAENARHLDDIKELEEDVKQLNSK---FDQKNRELGEANAEIKAMNSEIED 55
                5888888999*************997...778888888888888855555544 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.3    0.0016      0.35       2      51 ..       5      54 ..       4      68 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0016
   PF08286.6  2 eeldnekvrlakelndleselenlqseleelkeeleeleeqenegkeede 51
                ++l+ e+ r  +++++le+ +++l+s+ +++++el e + + +  + e e
  MMETSP1325-20131115|8063_1  5 ANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIE 54
                57999********************************9999988333333 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.4    0.0015      0.32      32      80 ..       2      50 ..       1      70 [] 0.55

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.0015
   PF08232.7 32 arIakLeGerrglenlkedLkrrvkmLekalkqeraklkslkagveses 80
                a++a+Le e+ +     ++L + vk+L+ +  q++++l +++a+ ++ +
  MMETSP1325-20131115|8063_1  2 AKVANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMN 50
                6889999988755555556777777777777777766666554444443 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.1    0.0024      0.52      70     130 ..       3      64 ..       1      70 [] 0.69

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0024
  PF03962.10  70 eleklkkeleelkqrikelqaeiekekkkreet.eereelleelkeleeelkklkkelekla 130
                 ++++l++e ++   +ikel++++++ ++k +++ +e  e+  e+k++++e++++ k+l + a
  MMETSP1325-20131115|8063_1   3 KVANLEAENARHLDDIKELEEDVKQLNSKFDQKnRELGEANAEIKAMNSEIEDVGKQLLAQA 64 
                 56777888888888888888888888777666635555677777777777777777776433 PP

>> PF08663.5  HalX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.1     0.012       2.7      19      62 ..       3      42 ..       1      47 [. 0.62
   2 ?    3.8   0.0      0.24        52      41      59 ..      42      60 ..      34      68 .. 0.68

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.012
   PF08663.5 19 KrAvLeaeksaaeLedsdeYqeLqerleeLradldatldeldad 62
                K A Leae +       d  +eL+e++ +L ++ d  + el+++
  MMETSP1325-20131115|8063_1  3 KVANLEAENAR----HLDDIKELEEDVKQLNSKFDQKNRELGEA 42
                66666666655....34445667777777777777777776654 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.24
   PF08663.5 41 LqerleeLradldatldel 59
                 ++++ ++ ++++++ ++l
  MMETSP1325-20131115|8063_1 42 ANAEIKAMNSEIEDVGKQL 60
                4567777777777777766 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   4.4    0.0024      0.52       6      55 ..      10      59 ..       1      68 [. 0.40

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0024
  PF01025.14  6 eeeeeedeeeeleeeleeleeevkelkdkllrllaefenlrkrtekekee 55
                e++   d+++elee++++l+ ++++ + +l +++ae++ +   +e+  ++
  MMETSP1325-20131115|8063_1 10 ENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQ 59
                22333333444444444444444444444444444444443333333333 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.0    0.0024      0.53      35      82 ..      12      55 ..       1      63 [. 0.65

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0024
   PF13747.1 35 deleaeiqaldadrsrLaqeLdkaearaerleeanrEvsrrLkaaiet 82
                +    +i++l++d ++L+ ++d++    ++l ean+E++ ++++ ie+
  MMETSP1325-20131115|8063_1 12 ARHLDDIKELEEDVKQLNSKFDQKN---RELGEANAEIK-AMNSEIED 55
                4445678889999999999998865...56777777775.45555555 PP

>> PF00430.13  ATP synthase B/B' CF(0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   5.1    0.0024      0.51      37      89 ..      16      68 ..       5      70 .] 0.89

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0024
  PF00430.13 37 nkikeaeerlkeaaellaeaeqqleqArkeaseiienakkeaqklkeeilaea 89
                ++ike ee  k+ ++  ++ +++l +A +e++++ ++ ++ +++l+++++++a
  MMETSP1325-20131115|8063_1 16 DDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAKQRA 68
                799**************************999999999999988888887766 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.1    0.0036      0.77     135     169 ..      16      50 ..       2      69 .. 0.45

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0036
   PF14362.1 135 aklaaltaeiaalqaeldeaqaevnaaeeevqcel 169
                 +++++l++++++l+++ d++++e+ +a++e ++ +
  MMETSP1325-20131115|8063_1  16 DDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMN 50 
                 34444444444444444444444444444433322 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   3.1    0.0041      0.89     119     174 ..       4      59 ..       1      69 [. 0.51

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0041
   PF05266.9 119 iaekeieqqeleseiaelerkilelrrkeallkekkeaed...keiarlkseasklkqe 174
                 +a+ e+e+ +    i+ele+++ +l  k   +++k+ +     +ei++++se +++ ++
  MMETSP1325-20131115|8063_1   4 VANLEAENARHLDDIKELEEDVKQLNSK---FDQKNRELGeanAEIKAMNSEIEDVGKQ 59 
                 4555556666666666666666666665...4444444332224444444444444333 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.7     0.005       1.1      72     135 ..       4      67 ..       1      70 [] 0.80

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.005
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  72 ldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklkklelekel 135
                 + +L+ e+ r l++++ele++ ++l+ ++ + + e  + ++e + + +e + +  + l   k+ 
  MMETSP1325-20131115|8063_1   4 VANLEAENARHLDDIKELEEDVKQLNSKFDQKNRELGEANAEIKAMNSEIEDVGKQLLAQAKQR 67 
                 5688899999999999999999999999999998888888888888888888887777766665 PP

>> PF10779.4  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.9      0.02       4.2      22      48 ..       4      30 ..       2      33 .. 0.88
   2 ?    5.7   3.4     0.057        12       2      48 ..      19      58 ..      16      69 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.02
   PF10779.4 22 enalEkadaalekqiknlnkdLskIkk 48
                + +lE  +a++  +ik+l++d++ +++
  MMETSP1325-20131115|8063_1  4 VANLEAENARHLDDIKELEEDVKQLNS 30
                689******************999875 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.057
   PF10779.4  2 qdikerlnrietklkeeekaenalEkadaalekqiknlnkdLskIkk 48
                ++++e+++++++k + +++++      +a  e+  k +n +++++ k
  MMETSP1325-20131115|8063_1 19 KELEEDVKQLNSKFDQKNREL-----GEANAEI--KAMNSEIEDVGK 58
                577777777777777544444.....3333333..467777666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1302  (0.0952311); expected 273.4 (0.02)
Passed bias filter:                      952  (0.0696314); expected 273.4 (0.02)
Passed Vit filter:                       207  (0.0151404); expected 13.7 (0.001)
Passed Fwd filter:                        64  (0.0046811); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              63  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|8061_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1049.60
//
Query:       MMETSP1325-20131115|8066_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|8067_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00022   20.5   0.0    0.00037   19.7   0.0    1.5  1  PF01747.12 ATP-sulfurylase


Domain annotation for each model (and alignments):
>> PF01747.12  ATP-sulfurylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   2.7e-08   0.00037     144     198 ..      12      64 ..       1      96 [. 0.86

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 2.7e-08
                 HCTTTTSEEEE---EEEETTTTEEEETCCS.STTGGG.EE--HHHHHHHHH-.--- CS
  PF01747.12 144 aakelgieivkfreaaYckkcgemasektcphgkeer.lkisGtklrellreGeep 198
                   ++ ++  + f++++Y+k++ +m   k +++ + ++ ++isG+k+r+l ++  +p
  MMETSP1325-20131115|8067_1  12 VLEDGQMGLISFDKFFYDKTDHQM---KAMDKSRPDDfISISGSKMRALAAQHATP 64 
                 5566788899**************...88999999999**********99998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 761.51
//
Query:       MMETSP1325-20131115|8071_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0044   16.1   0.3     0.0044   16.1   0.2    1.9  2  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.11   1.5e+03       6      13 ..       1       8 [.       1       8 [. 0.83
   2 !   16.1   0.2   3.2e-07    0.0044       1      26 [.      32      57 ..      32      59 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.11
                HHHHCTTT CS
  PF00036.27  6 FkefDkDg 13
                ++++D +g
  MMETSP1325-20131115|8071_1  1 MNVYDDNG 8 
                68899997 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 3.2e-07
                HHHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkeal 26
                e+ ++++++D D + ++++eEf++++
  MMETSP1325-20131115|8071_1 32 EWFKVWEKIDADMSRTMEYEEFVKYF 57
                6889******************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|8073_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-13   49.8   5.4    2.1e-13   49.6   3.7    1.0  1  PF07690.11 Major Facilitator Superfamily
     0.0048   15.4   3.9     0.0059   15.1   2.7    1.2  1  PF00083.19 Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   3.7   3.1e-17   2.1e-13      57     143 ..       3      91 ..       1      92 [. 0.93

  Alignments for each domain:
  == domain 1    score: 49.6 bits;  conditional E-value: 3.1e-17
  PF07690.11  57 drfGrrrvlllglllfalglllllfa...sslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllgg 143
                 d++G+rr+++l +++ ++g ++++f+    s++ +++++rv+ Glg+  ++ ++++++ dwf ++e ++a+gl  a + +G+++  ++++
  MMETSP1325-20131115|8073_1   3 DKLGARRCFVLFAAAIGVGQVIFAFGtsvKSIP-IMMIGRVVFGLGGENMAVGSSVIMEDWFRGKEMALAMGLNLAISRIGSVVNNVVSP 91 
                 9******************88888954568899.*************************************************9888775 PP

>> PF00083.19  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   2.7   8.7e-07    0.0059      71     147 ..       3      78 ..       1      90 [. 0.78

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 8.7e-07
  PF00083.19  71 drfGRkksllvalvlfvigavlqaaakakksvwvlivgRvivGlgvGlisvlvPmyisEiApkklrgalgslyqlai 147
                 d++G +++++  ++   +g+v+ a+ ++ ks+  +++gRv+ Glg G   ++ +  i E +   +  al+++ +lai
  MMETSP1325-20131115|8073_1   3 DKLGARRCFVLFAAAIGVGQVIFAFGTSVKSIPIMMIGRVVFGLG-GENMAVGSSVIMEDWFRGKEMALAMGLNLAI 78 
                 89*************************99************9987.4444444556666666666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 454.82
//
Query:       MMETSP1325-20131115|8074_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|8076_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|8069_1  [L=1230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.18u 0.84s 00:00:02.02 Elapsed: 00:00:00.88
# Mc/sec: 3349.45
//
Query:       MMETSP1325-20131115|8077_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       634  (0.0463721); expected 273.4 (0.02)
Passed bias filter:                      553  (0.0404476); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 452.65
//
Query:       MMETSP1325-20131115|8075_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 1475.09
//
Query:       MMETSP1325-20131115|8080_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00036   20.1   0.0       0.34   10.6   0.0    2.3  2  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
     0.0043   16.5   0.0      0.015   14.8   0.0    2.0  2  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00049       3.3      37      56 .]       3      22 ..       2      22 .. 0.89
   2 !   10.6   0.0     5e-05      0.34      22      53 ..      80     111 ..      70     115 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00049
   PF13893.1 37 akeylngvklygktLkveys 56
                a  +l+g++++g++L v+ys
  MMETSP1325-20131115|8080_1  3 AQVALDGKCINGGSLFVQYS 22
                55689**************8 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 5e-05
   PF13893.1  22 gqAfvefdtveaArkakeylngvklygktLkv 53 
                  ++ v f +ve A +a+++l+g+ l+++++ v
  MMETSP1325-20131115|8080_1  80 TYCAVLFRSVETASVALSALDGKTLDDGSVLV 111
                 578899*******************9886544 PP

>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       0.6   4.1e+03      55      66 ..       3      14 ..       2      17 .. 0.78
   2 !   14.8   0.0   2.2e-06     0.015      31      66 ..      70     106 ..      38     109 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 0.6
                HHHHHTTEBETT CS
  PF00076.17 55 Alealngkklgg 66
                A  al+gk ++g
  MMETSP1325-20131115|8080_1  3 AQVALDGKCING 14
                566799999998 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 2.2e-06
                 EES.TTSSEE-EEEEEESSHHHHHHHHHHHTTEBETT CS
  PF00076.17  31 vrd.etgrskgfafVeFeseedaekAlealngkklgg 66 
                 v+  e+g  + ++ V F s e a  Al+al+gk+l++
  MMETSP1325-20131115|8080_1  70 VTViEQGHQDTYCAVLFRSVETASVALSALDGKTLDD 106
                 4446789999************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1106.40
//
Query:       MMETSP1325-20131115|8082_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 596.43
//
Query:       MMETSP1325-20131115|8084_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 397.69
//
Query:       MMETSP1325-20131115|8086_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-10   41.0   0.0    1.3e-10   40.9   0.0    1.0  1  PF00149.23 Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> PF00149.23  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.0   9.5e-15   1.3e-10      61     150 ..       2      58 ..       1      59 [] 0.95

  Alignments for each domain:
  == domain 1    score: 40.9 bits;  conditional E-value: 9.5e-15
                 HHHTTSCEEEE---TTTHHHHHHHHHSTTHHHHCHSTCSSTCCCEESTEEEEETTEEEEEEETTSHCSTCHHHHHHHHHHHHHHCCEEES CS
  PF00149.23  61 klllpipvfllrGNHEsdpgnsaygflkeqakdprglanaeeeyeelsitllttsgelgglsglypllggeiqeeqleeflalplralvd 150
                 k+++p+++ l+rGNHEs++++++ygf++e++k                                 +++  ++++++ e f+ l+l a++d
  MMETSP1325-20131115|8086_1   2 KVRYPDRITLIRGNHESRQITQVYGFYDECLK---------------------------------KYGSVNVWRYCTEIFDFLSLSAIID 58 
                 789***************************96.................................9******************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 294.55
//
Query:       MMETSP1325-20131115|8087_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   14.1   0.0      0.044   13.6   0.0    1.2  1  PF03450.12 CO dehydrogenase flavoprotein C-terminal domain
        1.5    7.2   6.7       0.31    9.5   1.3    1.8  2  PF07168.6  Ureide permease
        2.3    8.6   6.5       0.44   10.9   0.4    2.0  2  PF08609.5  Nucleotide exchange factor Fes1


Domain annotation for each model (and alignments):
>> PF03450.12  CO dehydrogenase flavoprotein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   9.6e-06     0.044       8      73 ..      36     102 ..      33     115 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 9.6e-06
                 SSSS---SEEEEEEEEE.---BEEEEEEEEBSCSSSEEE-.HHHHHTT---BSSHHHHHHHHHHHHC CS
  PF03450.12   8 rreddiaivnaAfrveldedgkikdariafggvaptpvra.ekaeaaLvGkplseelleealealae 73 
                 r+++ ia+  aAf+v+ ++++++k+  +af  +a+t+  + + ++a+   +++s+++ + + + + +
  MMETSP1325-20131115|8087_1  36 RQKEEIAAKKAAFLVQREKHRTVKEKMVAFNPYASTVGQLgASTKAQTMSQNMSQNMPQSMSQSMPQ 102
                 67779*************999**************97655366677777777777766666665555 PP

>> PF07168.6  Ureide permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.3   6.7e-05      0.31     165     211 ..      13      59 ..       3      66 .. 0.83
   2 ?    0.4   0.2     0.041   1.8e+02      44      85 ..      69     113 ..      60     119 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 6.7e-05
   PF07168.6 165 ekseasissleleseiekedlekgeaddvkagtaeflvelekrraik 211
                 +++++   ++ +e e +++dl   +++++ a  a+flv+ ek+r++k
  MMETSP1325-20131115|8087_1  13 SRKKKLFADKADELEKKRKDLILRQKEEIAAKKAAFLVQREKHRTVK 59 
                 44555667788888889999999999*******************98 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.041
   PF07168.6  44 alalgeigkskpsk...pdfltqlaqdnwpsvllalaggvvlslg 85 
                 a ++g++g s+  +    ++  +++q   +s+  +++ g+  ++g
  MMETSP1325-20131115|8087_1  69 ASTVGQLGASTKAQtmsQNMSQNMPQSMSQSMPQSMSQGMSQTMG 113
                 678899987654331114555667777777777777777777766 PP

>> PF08609.5  Nucleotide exchange factor Fes1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.4   9.7e-05      0.44      18      82 ..       7      71 ..       2      78 .. 0.80
   2 ?    1.5   0.4     0.085   3.9e+02      18      40 ..      84     107 ..      70     125 .. 0.42

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 9.7e-05
   PF08609.5 18 teakdstesadapkstnedldpevLealfggpsdaelmkeamevitdeeatledkliafdnfeqL 82
                t+ak ++ +++  ++++++l+++  + ++  +++ +  k+a  v ++++ t+ +k++af+ +   
  MMETSP1325-20131115|8087_1  7 TTAKRESRKKKLFADKADELEKKRKDLILRQKEEIAAKKAAFLVQREKHRTVKEKMVAFNPYAST 71
                3444455555555556799**********99****************************987665 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.085
   PF08609.5  18 teakdstesada.pkstnedldpe 40 
                  +++ s++  ++  +s ++++++ 
  MMETSP1325-20131115|8087_1  84 MSQNMSQNMPQSmSQSMPQSMSQG 107
                 222222211111011222333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1395  (0.102033); expected 273.4 (0.02)
Passed bias filter:                      658  (0.0481276); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.46s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 543.46
//
Query:       MMETSP1325-20131115|8088_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-06   28.1   0.5      0.044   13.5   0.0    2.2  2  PF00514.18 Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.1   3.7e-06     0.051      18      40 ..       2      26 ..       2      27 .. 0.85
   2 !   13.5   0.0   3.2e-06     0.044       2      25 ..      31      54 ..      30      61 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.7e-06
                HHHHC..-SSHHHHHHHHHHHHHHH CS
  PF00514.18 18 vqLLk..sgdeevqeeAawALsNLa 40
                v+L +  ++d+ev+ eA+w++ N +
  MMETSP1325-20131115|8088_1  2 VKLASaaDTDPEVKNEACWVVLNAT 26
                567777799************9966 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 3.2e-06
                HHHHHHHHHCHHHHHHHHHHC-SS CS
  PF00514.18  2 penkqavieaGavppLvqLLksgd 25
                + ++++++++G+v +L +LL+ ++
  MMETSP1325-20131115|8088_1 31 DLQIEYLVKQGCVSVLGELLSETS 54
                679*****************9544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 423.19
//
Query:       MMETSP1325-20131115|8089_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 773.37
//
Query:       MMETSP1325-20131115|8093_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-08   35.2   0.3    1.5e-08   34.6   0.2    1.3  1  PF12796.2  Ankyrin repeats (3 copies)
    2.5e-08   34.1   0.9     0.0013   19.1   0.2    2.7  3  PF13637.1  Ankyrin repeats (many copies)
    7.2e-08   32.3   6.6    1.2e-05   25.2   0.5    2.3  2  PF13857.1  Ankyrin repeats (many copies)
    3.5e-05   23.2   4.5      0.011   15.4   0.3    3.0  2  PF00023.25 Ankyrin repeat
    3.9e-05   23.3   0.7       0.19   11.9   0.1    2.4  2  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.043   13.4   0.0      0.085   12.4   0.0    1.4  1  PF05920.6  Homeobox KN domain


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.2   6.8e-12   1.5e-08      24      86 ..      87     154 ..      67     157 .. 0.82

  Alignments for each domain:
  == domain 1    score: 34.6 bits;  conditional E-value: 6.8e-12
   PF12796.2  24 dl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelv.klLlekgadvn 86 
                 d     g+t L + a++ n + ++l l++ga++n+++++gn++Lh+A+ +    ++ ++L++kga+  
  MMETSP1325-20131115|8093_1  87 DSqddkGNTLLLVGAQNCNRKLMELVLARGANINHQNAHGNSALHFAMAYDTDGTLgEFLIQKGANDT 154
                 3355567****************************************888776544499999999865 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.4e-05     0.032       4      51 ..      63     110 ..      61     113 .. 0.89
   2 !   19.1   0.2   5.5e-07    0.0013      13      41 ..     105     133 ..     104     136 .. 0.90
   3 ?   -1.8   0.0       1.9   4.4e+03      19      37 ..     145     163 ..     144     163 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.4e-05
   PF13637.1   4 aLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilk 51 
                 +++ +a+ +rl+ ++  l+ +  ++ +d++Gnt+L + a++ n ++ +
  MMETSP1325-20131115|8093_1  63 TVFSQARNSRLRRLEDSLNADFPVDSQDDKGNTLLLVGAQNCNRKLME 110
                 57889999*********************************9977665 PP

  == domain 2    score: 19.1 bits;  conditional E-value: 5.5e-07
   PF13637.1  13 rlelvklLlekgidinrtdesGntaLhiA 41 
                 + +l +l l++g++in++++ Gn+aLh+A
  MMETSP1325-20131115|8093_1 105 NRKLMELVLARGANINHQNAHGNSALHFA 133
                 567888999*******************9 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 1.9
   PF13637.1  19 lLlekgidinrt.desGnta 37 
                 +L++kg++ + + + +G t+
  MMETSP1325-20131115|8093_1 145 FLIQKGAN-DTLaNVDGLTP 163
                 68888887.44478888886 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.4   2.2e-06    0.0051       9      56 .]      86     133 ..      80     133 .. 0.90
   2 !   25.2   0.5   5.3e-09   1.2e-05       2      54 ..     113     165 ..     111     166 .. 0.93

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2.2e-06
   PF13857.1   9 vnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 v+++d +gnt+L + a + +  +++l la+ga++n+++++g++al++A
  MMETSP1325-20131115|8093_1  86 VDSQDDKGNTLLLVGAQNCNRKLMELVLARGANINHQNAHGNSALHFA 133
                 6788999999999999999999999999*****************998 PP

  == domain 2    score: 25.2 bits;  conditional E-value: 5.3e-09
   PF13857.1   2 lehgpadvnatdeggntpLhlAak.ggalevvrlLlapgadlnlrdsdgltald 54 
                 l++g a++n+++ +gn++Lh+A     + ++ ++L+++ga+ +l + dglt++d
  MMETSP1325-20131115|8093_1 113 LARG-ANINHQNAHGNSALHFAMAyDTDGTLGEFLIQKGANDTLANVDGLTPYD 165
                 6778.9******************899999999999*****************9 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.3   4.7e-06     0.011       2      32 ..      93     123 ..      92     124 .. 0.96
   2 !    8.1   0.2   0.00094       2.1       1      28 [.     125     153 ..     125     158 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 4.7e-06
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G+T L + a++ n + ++l l +GA++n+q+
  MMETSP1325-20131115|8093_1  93 GNTLLLVGAQNCNRKLMELVLARGANINHQN 123
                 9*****************************9 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00094
                 TSCBHHHHHHHTT.HHHHHHHHHHTTSST CS
  PF00023.25   1 dGfTPLHlAalrg.nlevvklLlsqGAdl 28 
                 +G+++LH A  ++ +    ++L+++GA+ 
  MMETSP1325-20131115|8093_1 125 HGNSALHFAMAYDtDGTLGEFLIQKGAND 153
                 79*********998888888888899985 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.1   8.4e-05      0.19       2      30 .]      93     121 ..      92     121 .. 0.97
   2 !    9.6   0.0   0.00048       1.1       1      27 [.     125     152 ..     125     156 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.4e-05
   PF13606.1   2 GnTpLhlAasngrielveaLlengadina 30 
                 GnT+L + a+n++ +l+e+ l +ga+in+
  MMETSP1325-20131115|8093_1  93 GNTLLLVGAQNCNRKLMELVLARGANINH 121
                 9**************************97 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00048
   PF13606.1   1 nGnTpLhlAasngri.elveaLlengad 27 
                 +Gn++Lh A+ +     l e+L+++ga+
  MMETSP1325-20131115|8093_1 125 HGNSALHFAMAYDTDgTLGEFLIQKGAN 152
                 69*******9998661566******996 PP

>> PF05920.6  Homeobox KN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.7e-05     0.085      16      38 ..      38      69 ..      33      71 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.7e-05
   PF05920.6 16 k.........eelakqTglsrkqidnWFiNaR 38
                k         e +a++Tg +++++d+ F+ aR
  MMETSP1325-20131115|8093_1 38 KmkvavareeEAIADRTGTGVPDLDTVFSQAR 69
                255555555589*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 831.39
//
Query:       MMETSP1325-20131115|8094_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 292.89
//
Query:       MMETSP1325-20131115|8095_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|8092_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.093   12.5   2.6       0.35   10.7   0.0    2.5  3  PF04418.7  Domain of unknown function (DUF543)
       0.13   11.4   7.8       0.42    9.8   3.9    2.1  2  PF07694.7  5TMR of 5TMR-LYT
        1.1    8.7   6.0       0.88    9.1   3.1    1.7  1  PF08592.6  Domain of unknown function (DUF1772)
        3.8    6.3  10.6        4.8    5.9   7.4    1.3  1  PF12698.2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> PF04418.7  Domain of unknown function (DUF543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.7   5.8e+03      28      47 ..      38      57 ..      37      58 .. 0.73
   2 ?   10.7   0.0    0.0001      0.35      29      74 ..      68     113 ..      60     114 .. 0.90
   3 ?    1.2   0.3     0.095   3.2e+02      39      54 ..     131     145 ..     121     148 .. 0.68

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.7
   PF04418.7 28 ntlvktalGlliGvvaslll 47
                ++l+ ++ G+++ ++ s+++
  MMETSP1325-20131115|8092_1 38 DSLKHGSKGAGFAAIWSMFM 57
                56777788888888888765 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.0001
   PF04418.7  29 tlvktalGlliGvvaslllfrrRaapvalGaGvGiGaaYtecrylf 74 
                  l+k ++ + iG + + ll+ ++++ + +++ vG+ +a ++ +  +
  MMETSP1325-20131115|8092_1  68 ALRKWCTPFSIGYLIGALLMMSQMFLTLFCVFVGLARATDDNDDQL 113
                 5899*******************************99988877665 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.095
   PF04418.7  39 iGvvaslllfrrRaap 54 
                 +Gv ++ l+f++Raa+
  MMETSP1325-20131115|8092_1 131 YGV-FGGLVFKHRAAV 145
                 344.455678888876 PP

>> PF07694.7  5TMR of 5TMR-LYT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.9   0.00012      0.42      81     134 ..      47      98 ..      42     105 .. 0.82
   2 ?    1.3   0.0     0.048   1.6e+02      80     101 ..     119     140 ..     114     154 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00012
   PF07694.7  81 taiacgistilagllagliyrklkrrrktltpvvalligliveilqmliillla 134
                 +++a+++s+ ++ ++++++y+ l++  +   ++ ++lig+++ + qm + l+++
  MMETSP1325-20131115|8092_1  47 AGFAAIWSMFMVICISIYAYYALRK--WCTPFSIGYLIGALLMMSQMFLTLFCV 98 
                 5677777888888888888888888..888899999999999999*****9987 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.048
   PF07694.7  80 ftaiacgistilagllagliyr 101
                 + a++ ++  i+ g+++gl+++
  MMETSP1325-20131115|8092_1 119 AMAFFSFVLFIVYGVFGGLVFK 140
                 4566667777777777777754 PP

>> PF08592.6  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.1   0.00026      0.88      10      85 ..      20      97 ..      10     121 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00026
   PF08592.6 10 vmpallrlpaaqalkawqrinkag...kafmpvlalltalafaylavaalsgsrgpaarlllaaaaalllgivpvTlla 85
                v+ a++ + ++ a++  +   k g   + f++ ++++ ++++ + a++al+++ +p  +  ++++a+l+++ +  Tl+ 
  MMETSP1325-20131115|8092_1 20 VVIAIADVITSLAVASGNDSLKHGskgAGFAAIWSMFMVICISIYAYYALRKWCTP-FSIGYLIGALLMMSQMFLTLFC 97
                555566666666666666666666666889999999999999999**9*****966.899***********99999986 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   7.4    0.0014       4.8     209     289 ..      49     139 ..      15     150 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0014
   PF12698.2 209 ilgdllvgliqlllilll.afglegipfgnlllllllfllf.glayialgyllssl..fkse.......staqlvisililllsgfflglfp 289
                 + +++ +++++++ i ++ a+   + +++ +++l++ +l++  ++ ++++++++++  +++          a++++s+++++  g+f+gl++
  MMETSP1325-20131115|8092_1  49 FAAIWSMFMVICISIYAYyALR-KWCTPFSIGYLIGALLMMsQMFLTLFCVFVGLAraTDDNddqlnsdNGAMAFFSFVLFIVYGVFGGLVF 139
                 5556666666666555532444.678888888888555555144444455555555545544777776555789999999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       643  (0.0470304); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 876.96
//
Query:       MMETSP1325-20131115|8096_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        76  (0.00555881); expected 273.4 (0.02)
Passed bias filter:                       73  (0.00533938); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.48
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|8097_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|8091_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-23   81.1   0.0    2.1e-12   46.6   0.0    2.1  2  PF00069.20 Protein kinase domain
      9e-16   57.6   0.0    1.3e-06   27.6   0.0    2.4  3  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0   5.6e-12   3.9e-08     120     150 ..       2      32 ..       1      59 [. 0.85
   2 !   46.6   0.0   3.1e-16   2.1e-12     152     255 ..      78     175 ..      65     178 .. 0.88

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 5.6e-12
                 E-S--SGGGEEEETT--EEE------EEECE CS
  PF00069.20 120 iHrDLKpeNiLldkkgelkiaDFGlakklek 150
                 iHrDLKp+N+++  +g++ki DFGl++ +++
  MMETSP1325-20131115|8091_1   2 IHRDLKPSNCFFMLDGTVKIGDFGLSRSVSE 32 
                 9*************************98522 PP

  == domain 2    score: 46.6 bits;  conditional E-value: 3.1e-16
                 SS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHH CS
  PF00069.20 152 seklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeil 255
                 +++ t+ vgt  Y++PE    + +y++k D++slG+il+e++   + f +     +++++ ++l+++   +++  +++s+ +++li ++l++ pa+R++a  ++
  MMETSP1325-20131115|8091_1  78 GGDITSGVGTFMYASPEQTA-GGDYDEKTDIYSLGIILFEICH--PAFTTG---MERAMVLRDLHNRKLPKNWAVEKTSPGVCELILEMLAPSPAERPSASTVV 175
                 5678999*************.********************98..677766...6788888888888888888888999********************99876 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0     2e-10   1.4e-06     124     169 ..       1      46 [.       1      60 [. 0.83
   2 !   27.6   0.0   1.8e-10   1.3e-06     169     257 ..      88     176 ..      76     178 .. 0.85
   3 ?   -3.0   0.0       0.4   2.7e+03      16      38 ..     202     224 ..     198     244 .. 0.69

  Alignments for each domain:
  == domain 1    score: 27.5 bits;  conditional E-value: 2e-10
                 EEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECG CS
  PF07714.12 124 lvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpv 169
                 ++HrdL   N++   + +vki+DfGL+r++ ++ +  +++++  p 
  MMETSP1325-20131115|8091_1   1 MIHRDLKPSNCFFMLDGTVKIGDFGLSRSVSEEVHAAVESGDLSPS 46 
                 69****************************7766666666655555 PP

  == domain 2    score: 27.6 bits;  conditional E-value: 1.8e-10
                 GGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS-..--TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12 169 vkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrle..kpekcpeelyelmkqCweeepeeRptfkelve 257
                 + + +pE    + + +k+D++s G++l+Ei+  +     g++ + vl+ l+++k  +  + ek+++ + el+ + ++ +p+eRp+ +++v 
  MMETSP1325-20131115|8091_1  88 FMYASPEQTAGGDYDEKTDIYSLGIILFEICHPA--FTTGMERAMVLRDLHNRKLPKnwAVEKTSPGVCELILEMLAPSPAERPSASTVVA 176
                 67889**************************955..67899999999999766554411678999********************999876 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 0.4
                 EEEEEETTTTSSEEEEEEEEECT CS
  PF07714.12  16 vegtlkgekekkevkVavKtlke 38 
                 ++ +++ge+  +e++Va+K   e
  MMETSP1325-20131115|8091_1 202 LRVEATGEEMLHETTVAIKGAWE 224
                 55556666777788888886544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 1229.24
//
Query:       MMETSP1325-20131115|8098_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 781.42
//
Query:       MMETSP1325-20131115|8100_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        9.5    6.1  10.0        2.1    8.2   1.3    2.2  2  PF03245.8  Bacteriophage lysis protein


Domain annotation for each model (and alignments):
>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.3   0.00016       2.1      50      80 ..       2      37 ..       1      48 [. 0.74
   2 ?    2.8   0.9     0.007        95      63      88 ..      84     111 ..      80     122 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00016
   PF03245.8 50 endrLradvaaGrrRLrvka.tCpa....vpeaasa 80
                e+++Lr++vaa +rR  v+a +++a    v++ asa
  MMETSP1325-20131115|8100_1  2 EIAALRDEVAALQRRAAVAAtESQAeraaVSQRASA 37
                899*****************6555533334444443 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.007
   PF03245.8  63 rRLrvkatCpa..vpeaasaaglgdaas 88 
                 +R++v+ t+++  v++++++++  +aas
  MMETSP1325-20131115|8100_1  84 QRVSVASTSADtlVEATSTSSSTSNAAS 111
                 6999999999997777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       941  (0.0688268); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.42s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 563.59
//
Query:       MMETSP1325-20131115|8099_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.4   0.3       0.13   11.7   0.2    1.3  1  PF06139.7 BphX-like


Domain annotation for each model (and alignments):
>> PF06139.7  BphX-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   9.7e-06      0.13      55     126 ..      61     138 ..      36     151 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.7e-06
   PF06139.7  55 lvvGlqlaaiGvvalwGa...rdPlryl.alvpv..vivtevvdglWdlysivlshealvfglvtlvihvvwivwalv 126
                  ++G +laai +v+++ a    dP   + a+v    + +t ++       s   ++  l++g+ +lv+ vv+i+ a+ 
  MMETSP1325-20131115|8099_1  61 PIIGCGLAAISIVIFQEAepyHDPATNTlAVVAQwqLCITYFMAYTLSSGSFQTERSLLTVGICLLVVNVVIIAIAFI 138
                 599************99944447765544777642245566666666666777788899**************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       935  (0.0683879); expected 273.4 (0.02)
Passed bias filter:                      643  (0.0470304); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 1646.19
//
Query:       MMETSP1325-20131115|8103_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 159.76
//
Query:       MMETSP1325-20131115|8101_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-71  240.6   0.0    2.1e-71  240.4   0.0    1.0  1  PF00996.13 GDP dissociation inhibitor


Domain annotation for each model (and alignments):
>> PF00996.13  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.4   0.0   1.5e-75   2.1e-71     225     435 ..       2     215 ..       1     218 [. 0.97

  Alignments for each domain:
  == domain 1    score: 240.4 bits;  conditional E-value: 1.5e-75
                 EEE-----------HHHHHH----EE-S---SB--B-TT--B---B------B-S-EEE-GGG-G.GGEEEE-EEEEEEEEESS--TTSTT-SSEEEEE-GGG----S-EEEEEEEGGGTSS----EEEEEEEE--S.S-HHHHTHHHHHT---.-SEEE---EEEEEES-----SSEEE-----S-SBTHHHHHHHHHHHHHH---------- CS
  PF00996.13 225 lyPlYGlGelPqgfarlsaiyGGtymLdkpvdeivldedgkvvGvksedevlrakkvvsdPsYvp.ekvkkkgkvvraicilshPipntkdaesvqiilpqnqvgrksdiyvalvssahnvaakgkylaivsttvet.enPeselepglellgp.ieekfvkisdlyepvddgsedkifvsksyDatthfettveDvkdifkrltgkaldlsks 435
                 lyP+YGlG+lP++f+rl+ai+GGt+mL++++dei++d +gk+ G++ ++ev++a   +++PsY+p e v+ +g+vvr+ic l+h  +n  + ++ qiilp +qvgr++diy++ +s++ +v a g  laivst ve  +nP se+epg++llg+ i ++f ++s+ yepv+dg ++k+f+sksyD t+hf+t+++Dv+d++ r+tg++ld  ++
  MMETSP1325-20131115|8101_1   2 LYPMYGLGGLPEAFSRLAAINGGTFMLNRNIDEILFDAEGKAWGIRGGNEVAKATMFIGEPSYFPaEMVRATGQVVRSICFLDHLPNNVGSCQTGQIILPGSQVGRQNDIYISFMSKKLEVVAPGVCLAIVSTRVEGhQNPISEVEPGIALLGAgILQRFDSVSECYEPVEDGLSNKCFISKSYDETSHFKTAADDVLDMYYRVTGEELDXVDR 215
                 8****************************************************************899****************99999999********************************************7379************9769****************************************************997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 1137.09
//
Query:       MMETSP1325-20131115|8104_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       498  (0.0364248); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|8106_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 321.21
//
Query:       MMETSP1325-20131115|8107_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 469.49
//
Query:       MMETSP1325-20131115|8109_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 379.80
//
Query:       MMETSP1325-20131115|8105_1  [L=417]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-72  243.2   0.0    2.4e-72  243.0   0.0    1.0  1  PF00248.16 Aldo/keto reductase family
  ------ inclusion threshold ------
      0.064   13.2   0.1       0.27   11.2   0.1    2.0  2  PF11494.3  Ta0938


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.0   0.0   3.5e-76   2.4e-72       3     280 ..      75     405 ..      73     408 .. 0.91

  Alignments for each domain:
  == domain 1    score: 243.0 bits;  conditional E-value: 3.5e-76
  PF00248.16   3 glGtwslgndeisedealellraaleaGinlfDtAeyY.......gkgqseellgealkksrkkreeviiatKv.........grispiseglsrenieesleksLkrlgtdylDllllhrpdpslp.................sieevlealeelkkeGkirhiGvSnfsveileka....kkkkkvk.ivvvqveynll.neleeegllelcae.k.gvgiiaysplggGlltgkylseerkedkeprkd.............aqdaleelselakehgvslaqlalryalsrpavgsvipgassieqleenlkalelelseeeiaeide 280
                 +lGt+++g++ ++ + +++l   + e+G n++DtAe+Y        +g   + ++e+l++ r+kr+++++a+Kv          r+s + ++ +re+i+es+++sLkrlgtdy+Dll++h+pd+++p                 s  e+l+a +el+++Gkirh+GvSn++++ + +     + + +++ iv++q++y++l ++++e+gl+e+ca  + +vg+ ayspl+gG+ltgky   +  + +++r +             aq+a++e+ ++a++h +++ +lal+++ srp v s i+ga+++eql+en++++++e+++e  + +++
  MMETSP1325-20131115|8105_1  75 CLGTMTWGEQNTQAEGVEQLFLGCDELGLNFIDTAEMYpvptkaeTQGATDKTVAEWLRR-RGKRDDIVLASKVsgysdrinwLRKSGEGSRVNREQIIESVDASLKRLGTDYIDLLQIHWPDRYVPlfgedaydptkeredtvSFLEQLQAFKELVDAGKIRHLGVSNETPWGVAQFsalaEADPSLPkIVSIQNSYSMLvRSDFESGLMETCAPrNaNVGLLAYSPLAGGILTGKYAAGAGADVEKARLNlfvgfmdrykksiAQEAVAEYIKVAAKHSMTPTELALSWCHSRPWVASTIIGATTVEQLKENIESFAIEFTDEMNDDVNA 405
                 9********6666666666666666***********************************.*********************999***********************************************************************************9885555555465744444436**************************967*******************98777665555555************************************************************************98887776 PP

>> PF11494.3  Ta0938
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1     4e-05      0.27      16      50 ..      73     108 ..      66     129 .. 0.88
   2 ?   -2.8   0.0      0.89   6.1e+03      47      66 ..     327     346 ..     310     350 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4e-05
   PF11494.3  16 gcalcgatwgdyyedidg.eklffccdicaleflnm 50 
                  c l   twg+   + +g e+lf+ cd   l+f++ 
  MMETSP1325-20131115|8105_1  73 KCCLGTMTWGEQNTQAEGvEQLFLGCDELGLNFIDT 108
                 59999***********99899******999999875 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.89
   PF11494.3  47 flnmldevkkrtawdkvdel 66 
                 f+ ++d+ kk  a++ v e 
  MMETSP1325-20131115|8105_1 327 FVGFMDRYKKSIAQEAVAEY 346
                 78888888888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.38s 00:00:01.12 Elapsed: 00:00:00.49
# Mc/sec: 2039.35
//
Query:       MMETSP1325-20131115|8110_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.62    8.7   4.3       0.78    8.4   3.0    1.3  1  PF14362.1  Domain of unknown function (DUF4407)
        1.9    8.9   5.2       0.47   10.8   0.4    2.2  2  PF00816.16 H-NS histone family


Domain annotation for each model (and alignments):
>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   3.0   0.00011      0.78     144     219 ..      55     127 ..      36     194 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00011
   PF14362.1 144 iaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaeleankrka 219
                 +++l+ael+  +++  a+e+++++ + G ggtgv  +G+v+   k++ d +++ +++l+++ ++ ++++ + +++a
  MMETSP1325-20131115|8110_1  55 LKDLEAELEMMKSR--ALEQKARASAGG-GGTGVGETGKVANGIKSQADVLKQSMAALDKKKRDMESQMAQLEQLA 127
                 44444444444443..445555555555.79999999999999999999999999999888777777776332322 PP

>> PF00816.16  H-NS histone family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.31   2.1e+03       4      24 ..      56      72 ..      48      79 .. 0.47
   2 ?   10.8   0.4   6.9e-05      0.47       2      59 ..     108     183 ..     107     194 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.31
                XXXXXXXXXXXXXXXXXXXXX CS
  PF00816.16  4 ealleklekeaeeaekkekka 24
                +    +le+e+e ++ ++ ++
  MMETSP1325-20131115|8110_1 56 K----DLEAELEMMKSRALEQ 72
                3....3333333333333222 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 6.9e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...................XXXXXX.XXXXX--- CS
  PF00816.16   2 eLealleklekeaeeaekkekkaalaeirelaaeyGltleel..................aagrakkkakkkrakv 59 
                  L ++++++e + +++e+ +++   +++ +  +++Glt+e++                  aa++a++ + +k++ +
  MMETSP1325-20131115|8110_1 108 ALDKKKRDMESQMAQLEQLAAAGDGESVMRFFQSQGLTPEDMqrmmggsesdthdvlgqaAAKNAREGTYEKESDS 183
                 68999*************************************9888887766666665543333333444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       725  (0.0530281); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.50
# Mc/sec: 1073.57
//
Query:       MMETSP1325-20131115|8112_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 322.77
//
Query:       MMETSP1325-20131115|8113_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|8114_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.078   12.0  10.5      0.094   11.7   7.3    1.0  1  PF02601.10 Exonuclease VII, large subunit
       0.11   10.2   7.3       0.13    9.9   5.1    1.0  1  PF03200.11 Mannosyl oligosaccharide glucosidase
       0.18   11.4   1.0       0.39   10.3   0.3    1.8  2  PF09269.6  Domain of unknown function (DUF1967)
        0.3    8.2  21.5       0.33    8.1  14.9    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
       0.37    9.0  10.1       0.44    8.7   7.0    1.0  1  PF07093.6  SGT1 protein
        0.7    8.6   6.3       0.94    8.2   4.4    1.3  1  PF05582.7  YabG peptidase U57
        1.1    8.8  13.6        1.4    8.6   9.4    1.1  1  PF05279.6  Aspartyl beta-hydroxylase N-terminal region
          2    6.5  11.3        2.4    6.2   7.8    1.0  1  PF08192.6  Peptidase family S64
        2.4    6.3   7.9        2.6    6.2   5.5    1.1  1  PF03961.8  Protein of unknown function (DUF342)
        4.5    7.5  12.6        4.9    7.3   2.1    2.4  2  PF14039.1  YusW-like protein
        8.9    4.9  14.1         12    4.5   9.8    1.0  1  PF10351.4  Golgi-body localisation protein domain


Domain annotation for each model (and alignments):
>> PF02601.10  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   7.3   7.6e-05     0.094     157     275 ..      37     162 ..      22     165 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 7.6e-05
  PF02601.10 157 qrlsralksklekekaklnllknrltlksrrkplsk.....leqeeerleelkerleksleqllqskesqleklnaslaknnpdyklnkkl..ekitllkneldselssaesklrileeklkalsp 275
                 ++++ +++s+++++  kl++++   ++++   ++++     + qee++ e+++++l+++l+q   ++ ++ +++++++++ +++y+ ++    +k++ ++++ +s + +++++l +++ ++ +  p
  MMETSP1325-20131115|8114_1  37 ADMTALVQSTMQNKSSKLASSQLMSKEQRVALEAAEadalrIAQEEREAEQAQKELQTQLQQINFQAAEKTRQFEERMKQMEAEYAAREAAfaAKMEEMNQQARSIADKNAQQLAEMSVQMGMGGP 162
                 555666666666666666666555555554442222333336666666666666666666666666666666666666667777777766665566666666666666666666666666665555 PP

>> PF03200.11  Mannosyl oligosaccharide glucosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   5.1   0.00011      0.13     196     349 ..       7     157 ..       2     162 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00011
  PF03200.11 196 Gkfklelkskkskel.klkthllslkvpevdklkdlvqqslqekvkelvekastekekkeelalesalvlkdlkseeesnllvvQvvlkvefeidivfesasteeeeesltgeelskklekkkkefeekfekkFklkekkldkeelkvakaalsn 349
                 G  + ++ks ++ +    +++l++  ++  + ++ lvq+++q+k ++l++++ ++ke++  l++ +a +l  + ++ee +    Q+ l+++++ +i f+ a+++++ e    ++++ ++  ++++f +k e++ + ++   dk+ +++a+ ++  
  MMETSP1325-20131115|8114_1   7 GVVDSQVKSVEEANRiAVDANLAGGMKSGAADMTALVQSTMQNKSSKLASSQLMSKEQRVALEAAEADAL--RIAQEEREAEQAQKELQTQLQ-QINFQAAEKTRQFE-ERMKQMEAEYAAREAAFAAKMEEMNQQARSIADKNAQQLAEMSVQM 157
                 55555666666666666677777777788999999*******9999987777776665555555554444..456777788888999999987.79999998888766.6889999****************99988888999999999887765 PP

>> PF09269.6  Domain of unknown function (DUF1967)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.3   0.00031      0.39      17      47 ..      91     121 ..      89     130 .. 0.86
   2 ?   -1.9   0.0       1.9   2.4e+03      19      43 ..     133     157 ..     128     159 .. 0.54

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00031
                 HHHHHHTTEE--TGGG---HHHHHHH---HH CS
   PF09269.6  17 kierlvkqtnfdndealgylarrLkklGved 47 
                 +++  ++q+nf+  e  + +++r+k++  e 
  MMETSP1325-20131115|8114_1  91 ELQTQLQQINFQAAEKTRQFEERMKQMEAEY 121
                 678899*******************997665 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 1.9
                 HHHHTTEE--TGGG---HHHHHHH- CS
   PF09269.6  19 erlvkqtnfdndealgylarrLkkl 43 
                 e++ +q +   d++++ la++  ++
  MMETSP1325-20131115|8114_1 133 EEMNQQARSIADKNAQQLAEMSVQM 157
                 5555555555566666666554444 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  14.9   0.00027      0.33     644     758 ..      42     156 ..       8     159 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00027
   PF12128.3 644 vaeakqalkqarlelqrlkneqqslkdklekalaerkqqaeeqlqkldaelkqleekkkaaleelkddlreerlekkakwqevegeldeqlaqlkaaieaartqakarlkelkkq 758
                 +++   + k ++l  ++l +++q+ + +  +a a r +q e++ ++ ++el+   ++++  ++e+ ++++e+  +++a+ ++ e++  ++++++++++ +   +++++l+e+  q
  MMETSP1325-20131115|8114_1  42 LVQSTMQNKSSKLASSQLMSKEQRVALEAAEADALRIAQEEREAEQAQKELQTQLQQINFQAAEKTRQFEERMKQMEAEYAAREAAFAAKMEEMNQQARSIADKNAQQLAEMSVQ 156
                 4444444555555566666666666666666666666666666666666666666666666666666666666666777777777777777777777777777776666666655 PP

>> PF07093.6  SGT1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   7.0   0.00036      0.44     458     560 ..      31     146 ..       5     158 .. 0.51

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00036
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx RF
   PF07093.6 458 edeaededvsfdeeefleflreaLglkkeeidsilddrq...................sdskdkddeeddeededessssaeeleeleeymaamdeeLagttigksfetks.essankskkee 560
                  ++++ +d+++        +++ +++k+ +++s++  ++                   ++++++ ++e +++ ++ + + ae+++++ee m++m++e+a  +++   + ++ +++a + ++++
  MMETSP1325-20131115|8114_1  31 GMKSGAADMTA-------LVQSTMQNKSSKLASSQLMSKeqrvaleaaeadalriaqeEREAEQAQKELQTQLQQINFQAAEKTRQFEERMKQMEAEYAAREAAFAAKMEEmNQQARSIADKN 146
                 44444444444.......2333333333333322111112333444444446655444455555555555555666666666****************8866665555444322222222233 PP

>> PF05582.7  YabG peptidase U57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.4   0.00076      0.94      10     103 ..      33     129 ..      30     155 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00076
   PF05582.7  10 ksykkDilFkiidikeekgkkia..iLkgielRliadapldDlekveeeevkkkkkeee.ekveeslkkirkerkllkekkeekakkkkkeeeelfe 103
                 ks   D++  + + +++k +k+a   L ++e R++ +a   D  ++ +ee++ ++ ++e +++ ++++  ++e++ + e+++++++++++ +e +f 
  MMETSP1325-20131115|8114_1  33 KSGAADMTALVQSTMQNKSSKLAssQLMSKEQRVALEAAEADALRIAQEEREAEQAQKElQTQLQQINFQAAEKTRQFEERMKQMEAEYAAREAAFA 129
                 5667788888888877666555422799*********999998888777755544333303333344433444444566677777777777777665 PP

>> PF05279.6  Aspartyl beta-hydroxylase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   9.4    0.0011       1.4      81     184 ..      48     149 ..      14     159 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0011
   PF05279.6  81 eaevvaeeeeqlaeekekqkveeevkEqlkkvkeeivvkeeeeegieeepqleeekkllkedsderqeeleagkvkeevEeslkveetvseeakkdmkekasee 184
                 +++  +    ql  +++++++e +  + l+  +ee ++++ ++e +++ +q + +   ++++ +er++++ea+ + +e+   +k+ee+ +++ +    +k +++
  MMETSP1325-20131115|8114_1  48 QNKSSKLASSQLMSKEQRVALEAAEADALRIAQEEREAEQAQKELQTQLQQINFQAAEKTRQFEERMKQMEAEYAAREAAFAAKMEEMNQQARSI--ADKNAQQ 149
                 3344444567888899999999999999**********99999999999999999999999*****************99999999998776654..4444444 PP

>> PF08192.6  Peptidase family S64
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   7.8     0.002       2.4      73     195 ..      29     154 ..       5     157 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.002
   PF08192.6  73 slnlnpsisntnesatsvskksgekvekslfskkdskkslstkqssy...tslnavaeeesktsqasskksslessqplqtlnikeeseeskekeeeesvedelkeLeedlaaimdqinnsvinls 195
                 +  +++++ +++  ++s+++++++k  +s+  +k+++ +l + + +    ++ +  ae+ +k+ q++ ++ ++++++  ++++ + +++e +    e   + +++e++++  +i d+  ++++++s
  MMETSP1325-20131115|8114_1  29 AGGMKSGAADMTALVQSTMQNKSSKLASSQLMSKEQRVALEAAEADAlriAQEEREAEQAQKELQTQLQQINFQAAEKTRQFEERMKQMEAEYAAREAAFAAKMEEMNQQARSIADKNAQQLAEMS 154
                 334566667767889999999999999998888999999998887763222333334444445555555555566656666666666666666677778899999999999999998888887776 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.5    0.0021       2.6     318     408 ..      63     149 ..       9     160 .. 0.58

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0021
   PF03961.8 318 gtkteiev.gldepelkeklkeleeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeelesk 408
                 +++  +e+ + d + +    ++ e+e e+ ++el++  ++++   + +++ q+e+++k++ +++ +   ++  ++ee++++  ++ ++ +++
  MMETSP1325-20131115|8114_1  63 EQRVALEAaEADALRI----AQEEREAEQAQKELQTQLQQINFQAA-EKTRQFEERMKQMEAEYAAREAAFAAKMEEMNQQARSIADKNAQQ 149
                 3333333333343333....33334444444444333333333333.556677777777777777777888888888888777666655554 PP

>> PF14039.1  YusW-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   2.1    0.0039       4.9      34      66 ..      77     109 ..      60     114 .. 0.83
   2 ?    5.5   1.8     0.015        18      12      46 ..     112     148 ..     108     159 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0039
   PF14039.1  34 gangeeleGdeAleelealLseLsvdsetseee 66 
                   ++ee e ++A +el++ L+++++++++++ +
  MMETSP1325-20131115|8114_1  77 RIAQEEREAEQAQKELQTQLQQINFQAAEKTRQ 109
                 5678999*******************9988766 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.015
   PF14039.1  12 de.deyeieYekekdkleAkie.dgangeeleGdeAl 46 
                 +  +++e+eY  ++  + Ak+e  +++  ++  ++A 
  MMETSP1325-20131115|8114_1 112 ERmKQMEAEYAAREAAFAAKMEeMNQQARSIADKNAQ 148
                 44499*****************333333444455554 PP

>> PF10351.4  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   9.8    0.0094        12      68     175 ..      44     156 ..      40     158 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.0094
   PF10351.4  68 yseplekerkerleklllssDfsdlegleekvvklqeeireleeikeeleerekkldkegredllllevelarkeeelyllmkaittaqlklde.....knkskssalrwsik 175
                  s+ ++k+ k   ++l+ + ++  le++e++  ++ +e+re e++++el+++ ++++ +  e+ ++ e++++++e+e + + +a+ +++ +  +     ++k+++++ ++s++
  MMETSP1325-20131115|8114_1  44 QSTMQNKSSKLASSQLMSKEQRVALEAAEADALRIAQEEREAEQAQKELQTQLQQINFQAAEKTRQFEERMKQMEAEYAAREAAFAAKMEEMNQqarsiADKNAQQLAEMSVQ 156
                 44445555555555555555566******999999**************************************************9999998777777777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2544  (0.186074); expected 273.4 (0.02)
Passed bias filter:                      765  (0.0559538); expected 273.4 (0.02)
Passed Vit filter:                       110  (0.00804564); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.77u 0.42s 00:00:01.19 Elapsed: 00:00:00.54
# Mc/sec: 758.85
//
Query:       MMETSP1325-20131115|8116_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 312.99
//
Query:       MMETSP1325-20131115|8117_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.3   1.6       0.94    9.0   0.1    2.4  2  PF13414.1  TPR repeat
     0.0036   17.4  16.6      0.004   17.3   0.1    4.5  4  PF07721.9  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.091   12.6   7.2       0.18   11.6   0.1    2.9  3  PF07719.12 Tetratricopeptide repeat
       0.11   13.0  14.9        2.2    9.0   0.4    3.3  3  PF13428.1  Tetratricopeptide repeat
        1.2    9.7  12.6       0.13   12.8   2.8    2.4  2  PF13432.1  Tetratricopeptide repeat
        1.7    8.5   5.7        1.1    9.0   1.1    2.3  2  PF13424.1  Tetratricopeptide repeat
        3.4    7.5   5.4        8.1    6.3   0.0    3.1  3  PF13374.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1   0.00078       1.5      44      62 ..      47      65 ..      38      71 .. 0.88
   2 !    9.0   0.1   0.00048      0.94       4      31 ..      79     106 ..      76     123 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00078
   PF13414.1 44 AlaylklgkdyeeAledye 62
                A ayl+lg+++eeA+e ++
  MMETSP1325-20131115|8117_1 47 ARAYLRLGDKDEEAAETAR 65
                89************99876 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00048
   PF13414.1   4 ealkelGnalfkegdydeAieayekAle 31 
                 e+++ lG ++ ++gd++ A+++++++ e
  MMETSP1325-20131115|8117_1  79 ECHRVLGIVAKRRGDLAAAEAHFDEGAE 106
                 7999********************9876 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.4     0.015        29       8      19 ..      47      58 ..      43      65 .. 0.88
   2 !   17.3   0.1     2e-06     0.004       3      26 .]      80     103 ..      78     103 .. 0.92
   3 ?   -3.0   0.4         7   1.4e+04      18      22 ..     106     110 ..     105     111 .. 0.74
   4 ?    4.8   0.1     0.022        42      11      25 ..     129     143 ..     127     144 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.015
                HHHHHH------ CS
   PF07721.9  8 ArallalGdlde 19
                Ara+l+lGd de
  MMETSP1325-20131115|8117_1 47 ARAYLRLGDKDE 58
                9********886 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 2e-06
                 HH---HHHHHH-------HHHHHT CS
   PF07721.9   3 allaLArallalGdldeAraller 26 
                 ++ +L+ ++ ++Gdl++A+a++++
  MMETSP1325-20131115|8117_1  80 CHRVLGIVAKRRGDLAAAEAHFDE 103
                 799******************986 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 7
                 ---HH CS
   PF07721.9  18 deAra 22 
                 +eAra
  MMETSP1325-20131115|8117_1 106 EEARA 110
                 78987 PP

  == domain 4    score: 4.8 bits;  conditional E-value: 0.022
                 HHH-------HHHHH CS
   PF07721.9  11 llalGdldeAralle 25 
                 +  +G+++e +a+ e
  MMETSP1325-20131115|8117_1 129 YEGQGRAAEGEAMIE 143
                 6689********988 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.2     0.017        33       8      22 ..      47      62 ..      47      72 .. 0.85
   2 ?   11.6   0.1   9.2e-05      0.18       2      30 ..      79     107 ..      78     111 .. 0.89
   3 ?   -2.5   0.1         3   5.9e+03      11      22 ..     129     140 ..     127     148 .. 0.59

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.017
                HHHHHHTT-H.HHHHH CS
  PF07719.12  8 Glayyklgdy.eeAle 22
                ++ay++lgd  eeA+e
  MMETSP1325-20131115|8117_1 47 ARAYLRLGDKdEEAAE 62
                789*******777776 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 9.2e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAlel 30 
                 e++  lG ++ ++gd++ A+++f++  e 
  MMETSP1325-20131115|8117_1  79 ECHRVLGIVAKRRGDLAAAEAHFDEGAEE 107
                 68999*******************98775 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 3
                 HHHTT-HHHHHH CS
  PF07719.12  11 yyklgdyeeAle 22 
                 y+ +g+ +e ++
  MMETSP1325-20131115|8117_1 129 YEGQGRAAEGEA 140
                 666776666554 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.6    0.0044       8.5       8      31 ..      47      71 ..      42      79 .. 0.84
   2 ?    9.0   0.4    0.0011       2.2       6      31 ..      83     108 ..      78     119 .. 0.82
   3 ?    5.7   0.8     0.013        24       6      34 ..     123     152 ..     117     163 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0044
   PF13428.1  8 arallalGdpd.eAiallrralala 31
                ara+l+lGd d eA++ +r  la a
  MMETSP1325-20131115|8117_1 47 ARAYLRLGDKDeEAAETARGGLAEA 71
                89******98637999999999876 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0011
   PF13428.1   6 alarallalGdpdeAiallrralala 31 
                  l+++  ++Gd+++A+a++++ ++ a
  MMETSP1325-20131115|8117_1  83 VLGIVAKRRGDLAAAEAHFDEGAEEA 108
                 589999**************997755 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.013
   PF13428.1   6 alar.allalGdpdeAiallrralalaPdd 34 
                 +l++ +++ +G+ +e++a+ ++a+ ++ + 
  MMETSP1325-20131115|8117_1 123 DLVQfVYEGQGRAAEGEAMIEAAAXADGKA 152
                 566525999**************9887764 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.8   6.5e-05      0.13       4      58 ..      47     105 ..      44     110 .. 0.91
   2 ?    1.7   0.9       0.2     4e+02      40      61 ..     128     149 ..     121     160 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.5e-05
   PF13432.1   4 ArallraGd.ydeAlaaleaalalaPe...aaeallllaeallrlgrldeAaallraal 58 
                 Ara+lr+Gd  +eA++  +  la+a +     e +  l+ ++ r+g+l++A+a +++ +
  MMETSP1325-20131115|8117_1  47 ARAYLRLGDkDEEAAETARGGLAEAKKittRIECHRVLGIVAKRRGDLAAAEAHFDEGA 105
                 9************************88899**********************8888754 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.2
   PF13432.1  40 allrlgrldeAaallraalala 61 
                 ++  +gr +e +a ++aa+ ++
  MMETSP1325-20131115|8117_1 128 VYEGQGRAAEGEAMIEAAAXAD 149
                 5667788888877777776443 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.25   4.9e+02      53      66 ..      47      61 ..      47      73 .. 0.71
   2 ?    9.0   1.1   0.00059       1.1       7      72 ..      80     145 ..      75     151 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.25
   PF13424.1 53 anlylalgdyde.Al 66
                a++yl+lgd de A 
  MMETSP1325-20131115|8117_1 47 ARAYLRLGDKDEeAA 61
                678888887655355 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00059
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekA 72 
                 ++  l+ v +r gd+  A++++ +  e +r  g   ++++ a      +y+ +g+ +e +++ e A
  MMETSP1325-20131115|8117_1  80 CHRVLGIVAKRRGDLAAAEAHFDEGAEEARACGLYLLELLCARDLVQFVYEGQGRAAEGEAMIEAA 145
                 7889999999************99999999999888888888888888888888888888777766 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.42   8.1e+02       9      20 ..      47      58 ..      47      62 .. 0.80
   2 ?    6.3   0.0    0.0042       8.1       8      27 ..      84     103 ..      78     106 .. 0.88
   3 ?    1.6   0.1      0.13   2.5e+02      11      29 ..     128     146 ..     119     151 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.42
   PF13374.1  9 Alalrargryee 20
                A+a+ ++g+ +e
  MMETSP1325-20131115|8117_1 47 ARAYLRLGDKDE 58
                799999988877 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0042
   PF13374.1   8 LAlalrargryeeAlaleee 27 
                 L+++  +rg++++A+a++ e
  MMETSP1325-20131115|8117_1  84 LGIVAKRRGDLAAAEAHFDE 103
                 899************99876 PP

  == domain 3    score: 1.6 bits;  conditional E-value: 0.13
   PF13374.1  11 alrargryeeAlaleeeal 29 
                 ++  +gr +e +a+ e+a+
  MMETSP1325-20131115|8117_1 128 VYEGQGRAAEGEAMIEAAA 146
                 68899********999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 856.57
//
Query:       MMETSP1325-20131115|8118_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00041   19.8   0.0     0.0042   16.6   0.0    2.0  2  PF00635.21 MSP (Major sperm protein) domain
  ------ inclusion threshold ------
      0.014   14.8   2.1      0.022   14.2   0.2    2.2  2  PF07610.6  Protein of unknown function (DUF1573)


Domain annotation for each model (and alignments):
>> PF00635.21  MSP (Major sperm protein) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   6.1e-07    0.0042      22      79 ..       8      68 ..       3      77 .. 0.79
   2 ?    1.3   0.0     0.034   2.3e+02      10      36 ..     115     138 ..     101     139 .] 0.71

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 6.1e-07
                EEEEEEB-SSS-EEEEE...EES-CCCEEEESSEEEB----EEEEEEEEE-----TTS.EC CS
  PF00635.21 22 sklklkNtskkrvaFKv...KttnpkkyrvrPvyGivkpgesveitvtrqpqdkededkkk 79
                +++ l N+ k +v F +   K  + + ++v+P++G ++pge+ +i vt+ + +++  +++k
  MMETSP1325-20131115|8118_1  8 EEMVLANNGKYPVDFGFvvrKAATRDLFTVEPATGTIQPGEKETIGVTFCSLREVNLKDNK 68
                567777777777766665567778899********************99887777666555 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.034
                 EEE----SS-EEEEEEEEB-SSS-EEE CS
  PF00635.21  10 lvfaaegnkqgtsklklkNtskkrvaF 36 
                 ++f++e+   ++  + +kN  + + aF
  MMETSP1325-20131115|8118_1 115 VKFNEEP---RKRRFDIKNEGQFDFAF 138
                 3445555...99999****99999888 PP

>> PF07610.6  Protein of unknown function (DUF1573)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.2   3.2e-06     0.022      25      45 .]      36      56 ..      35      56 .. 0.94
   2 ?   -1.0   0.0      0.18   1.2e+03       2       9 ..     126     133 ..     125     136 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.2e-06
   PF07610.6 25 tpelskkpIaPGesgeikvty 45
                t+e+ + +I+PGe+ +i vt+
  MMETSP1325-20131115|8118_1 36 TVEPATGTIQPGEKETIGVTF 56
                89999***************9 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.18
   PF07610.6   2 FkftNtGd 9  
                 F ++N G+
  MMETSP1325-20131115|8118_1 126 FDIKNEGQ 133
                 99***996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 679.78
//
Query:       MMETSP1325-20131115|8120_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.034   12.7   0.1      0.043   12.4   0.1    1.0  1  PF01534.12 Frizzled/Smoothened family membrane region


Domain annotation for each model (and alignments):
>> PF01534.12  Frizzled/Smoothened family membrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   3.1e-06     0.043     172     247 ..       4      83 ..       2      93 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.1e-06
  PF01534.12 172 gnlnldalrgf.vlaPlvvvlviGtlfllaGlvslfrir...svikkqgtktdKleklmlriGvfsvLylvpavvviacl 247
                 g++n+ +   f v++Pl+  l++  +fl       + ++     i +++ + d +e ++++ G ++++++ p++ + a l
  MMETSP1325-20131115|8120_1   4 GETNYVHVVLFaVVMPLFGALFVFLTFLRLAAKPSIGVKrrgRAISDERLRRDWIEIMLIKFGNMAIIFTAPIAYKTAAL 83 
                 777777777765889*********9999655544444441115677777999********************99887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 427.92
//
Query:       MMETSP1325-20131115|8119_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.76    9.4   9.9       0.89    9.2   6.9    1.2  1  PF07897.6 Protein of unknown function (DUF1675)


Domain annotation for each model (and alignments):
>> PF07897.6  Protein of unknown function (DUF1675)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   6.9   6.5e-05      0.89      91     199 ..      56     164 ..      11     167 .. 0.89

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 6.5e-05
   PF07897.6  91 rlekessgvsngddqdsveaakaaasqrdkesskavetgseeatsssssgpsssglkekdvlveaaasgrakderssvsnletkaesssagtepseakanksneekkek 199
                  ++ + +g + g   +s +  k+++s+++  s +  e +   a +    ++ + g+++  +++++a++ + k+++s+ +     +++s++++ p+ +ka+  +++kk+k
  MMETSP1325-20131115|8119_1  56 ASKAKAKGKAKGAAASSKDSGKTTGSTKRAASVDLAELEATLADKDYAPPKAKRGKNSSSSKKVGAGASNGKGSSSAAEAGGAAPKASKKRAAPKAPKAKAPKKQKKKK 164
                 5555566667777777889999******************************************99999999999999999******************9999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       678  (0.0495904); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 745.53
//
Query:       MMETSP1325-20131115|8121_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.0   0.4      0.057   13.0   0.3    1.1  1  PF04534.7 Herpesvirus UL56 protein


Domain annotation for each model (and alignments):
>> PF04534.7  Herpesvirus UL56 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   4.2e-06     0.057      80     141 ..      16      77 ..       5      83 .] 0.81

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 4.2e-06
   PF04534.7  80 raaqraarrarrraerrarrrsfgagglfv.stPlflPetrlaappdvrsdlvsglatyaeat 141
                 +a   aa r r+  e++a   s + ggl+  ++P+f+    l+a   +++ lv ++a+   a+
  MMETSP1325-20131115|8121_1  16 EARALAAERKRKEEEKKASELSLSLGGLPEgEKPIFAGVLALGAA-SIGGILVQAIAGGSSAP 77 
                 45566899********************96478***999888875.69999999999866554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 368.33
//
Query:       MMETSP1325-20131115|8124_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 332.13
//
Query:       MMETSP1325-20131115|8123_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.7   0.4       0.87    9.7   0.0    2.1  2  PF13646.1 HEAT repeats


Domain annotation for each model (and alignments):
>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1     0.053   7.2e+02      44      66 ..       9      33 ..       2      45 .. 0.57
   2 ?    9.7   0.0   6.3e-05      0.87      36      84 ..      87     134 ..      38     138 .. 0.62

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.053
   PF13646.1 44 dpevRraAaeaLgkl..gdpealpa 66
                d++   aA+ a +++  g++ a++a
  MMETSP1325-20131115|8123_1  9 DEASSLAAIDAVSRFaaGSDTAMAA 33
                5555567777777764444444433 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 6.3e-05
   PF13646.1  36 LlelLkdsdpevRraAaeaLgklgdpealpaLlklldddedavvreaaa 84 
                 L ++ +++ +++ r+  +aLg++  +++++ L+ ll ++    vr a+ 
  MMETSP1325-20131115|8123_1  87 LASVPSSDRSALNRKLFNALGAVNGKDSMSLLMGLLGTPV-GEVRYASY 134
                 3334455667777888888888888888888888777654.44455544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 807.47
//
Query:       MMETSP1325-20131115|8125_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 294.29
//
Query:       MMETSP1325-20131115|8127_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.61
# Mc/sec: 196.42
//
Query:       MMETSP1325-20131115|8128_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-16   59.6   0.0    2.3e-16   59.4   0.0    1.1  1  PF13246.1 Putative hydrolase of sodium-potassium ATPase alpha subunit


Domain annotation for each model (and alignments):
>> PF13246.1  Putative hydrolase of sodium-potassium ATPase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   1.7e-20   2.3e-16      18      90 ..      21     108 ..       5     109 .. 0.80

  Alignments for each domain:
  == domain 1    score: 59.4 bits;  conditional E-value: 1.7e-20
   PF13246.1  18 e..ilGdptEaALlvlaeklgvgkdveelreeykkvaelpFnserKrmsvvhk.................ekeylllfvKGAperilerCtk 90 
                 +  ++G++tEaALlv+a+k+g    v++lre++++++e+ F+serKrm v ++                 e ++ ++fvKG  e +l++C +
  MMETSP1325-20131115|8128_1  21 TavVNGQATEAALLVAAAKCG----VADLRERTQRLHEVAFSSERKRMEVRCRldascgvvgkslvkqtgEAGVQCYFVKGMLEGVLDHCGS 108
                 13499***************4....689***********************76666777777788887653336778*************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 591.75
//
Query:       MMETSP1325-20131115|8129_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-05   22.3   0.0    8.9e-05   21.8   0.0    1.2  1  PF03741.11 Integral membrane protein TerC family


Domain annotation for each model (and alignments):
>> PF03741.11  Integral membrane protein TerC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   6.5e-09   8.9e-05     147     183 ..       2      38 ..       1      39 [. 0.95

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 6.5e-09
  PF03741.11 147 vlrflatllaklierfpalktlalllLlligvkLlle 183
                 +lr+l+t+lak  + +++l+ +++++L+++g+kL +e
  MMETSP1325-20131115|8129_1   2 GLRSLYTVLAKAAADLKYLEPAVAIILGFVGAKLGAE 38 
                 79********************************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 357.19
//
Query:       MMETSP1325-20131115|8132_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.064   13.4   0.1      0.064   13.4   0.0    1.1  1  PF09821.4 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit


Domain annotation for each model (and alignments):
>> PF09821.4  ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.7e-06     0.064      39     104 ..      20      84 ..       2      85 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.7e-06
   PF09821.4  39 eGrrfveadikerKelfaeqLlkivplaahirrvldereshelpeerfleeledylspeeaeetlk 104
                  G+r+  +   +r++++++ ++  v ++  +++v + ++ + +++++ ++ +e+ +++ ++e+t +
  MMETSP1325-20131115|8132_1  20 TGKRVTGGFQSQRQHILRQLIQG-VNFFDLMNDVKTMNDLQAANRDEKEHLVEKEYNTFGDEKTVR 84 
                 68888888889999999988888.******************************999988888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|8126_1  [L=317]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-22   79.2   0.1    3.1e-15   55.8   0.0    2.1  2  PF04399.8  Glutaredoxin 2, C terminal domain
    2.2e-09   37.3   0.0    4.3e-09   36.3   0.0    1.5  1  PF13417.1  Glutathione S-transferase, N-terminal domain
      8e-08   32.0   0.0    2.4e-07   30.5   0.0    1.9  2  PF13409.1  Glutathione S-transferase, N-terminal domain
    0.00052   19.8   1.1     0.0022   17.8   0.1    2.3  3  PF00462.19 Glutaredoxin
  ------ inclusion threshold ------
      0.021   14.8   0.0       0.13   12.3   0.0    2.3  2  PF02798.15 Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF04399.8  Glutaredoxin 2, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   4.8e-08   0.00013       3      43 ..     105     145 ..     103     148 .. 0.93
   2 !   55.8   0.0   1.1e-18   3.1e-15      53     127 ..     173     248 ..     162     253 .. 0.90

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 4.8e-08
   PF04399.8   3 iaawlkkvgsllskLllPRfvkldlpEfatqsArkyftekk 43 
                  ++w+k+++++l  L+ PR +k  lpEf  q+ +++f+++ 
  MMETSP1325-20131115|8126_1 105 FKQWQKSLQTTLRMLTRPRYMKTALPEFMQQDGKDAFVKNH 145
                 589**********************************9875 PP

  == domain 2    score: 55.8 bits;  conditional E-value: 1.1e-18
   PF04399.8  53 lledteeliaelnalLeelepllksseavng.qLsiddiilFplLrnltivkgvefpprveaYleevskatkvkLl 127
                 l ++t+e++ +ln+ L+elep++ s+ea+ +   s+ddi l++ Lr+++++kg efp+ v++Y++   ka++v  l
  MMETSP1325-20131115|8126_1 173 LETKTDEYLPQLNEALKELEPMIYSKEACSEgGFSYDDIDLWSRLRSISLIKGAEFPKGVKEYMDYHEKAADVXAL 248
                 44689*******************99999888**********************************9999999755 PP

>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   1.6e-12   4.3e-09       2      70 ..      17      87 ..      16      92 .. 0.85

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 1.6e-12
                E--TTSHHHHHHHHHHHH----EEE----TTTTHHHHHHH-TT--SSEEE.----..EEESHHHHHHHHHHH CS
   PF13417.1  2 ygspfSpyarkvrlaLeekglpyelvevtpgkkrpellalnpkgkvPvLe.ddge..vltdSlvIieyLeer 70
                y + ++p++ +vrlaL +k++ +e+v    ++  +   al +k+  P+L+ ++++  ++ +Sl+I+e+++++
  MMETSP1325-20131115|8126_1 17 YVYDHCPFCVRVRLALGYKNVKHEVVFMANDD-VATPTALIGKKIAPILVmPNDDmdPMPESLDICEFFDTN 87
                8899**********************875555.78889999********74443355************986 PP

>> PF13409.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   8.7e-11   2.4e-07       1      69 [.      21      86 ..      21      87 .. 0.84
   2 ?   -3.3   0.0       3.1   8.5e+03      10      34 ..     247     271 ..     244     279 .. 0.77

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 8.7e-11
                --HHHHHHHHHHHH----EEEEEEH....TTSHHHHHHHH------SEEE.----..EEESHHHHHHHHHH CS
   PF13409.1  1 acPwahRvlialalkgledeisvvplepkgfekseellalsprgtVPvLwdkdgt..vineSseIlrylne 69
                +cP++ Rv++al +k++ +e++++   +++    ++  al ++   P+L+ +++      eS++I++++++
  MMETSP1325-20131115|8126_1 21 HCPFCVRVRLALGYKNVKHEVVFM--ANDDV---ATPTALIGKKIAPILVMPNDDmdPMPESLDICEFFDT 86
                5*******************9888..33333...4568999999*******855556************98 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 3.1
                 HHHHH----EEEEEEH....TTSHH CS
   PF13409.1  10 ialalkgledeisvvplepkgfeks 34 
                  +l+++ l  +i  ++++++g + +
  MMETSP1325-20131115|8126_1 247 ALLEHADLKCDIRMYTSGGWGIDQP 271
                 5788999999999888888877654 PP

>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1     8e-07    0.0022       3      34 ..      16      47 ..      15      55 .. 0.88
   2 ?   -3.4   0.0       3.2   8.9e+03       2       9 ..     194     201 ..     194     202 .. 0.88
   3 ?   -0.8   0.0      0.51   1.4e+03      13      45 ..     230     262 ..     227     269 .. 0.77

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 8e-07
                EEE-STSHHHHHHHHHHHHTTHHEEEEETTTC CS
  PF00462.19  3 vftkptCpyCkkakrlLdelgvkyeeidvded 34
                v+ ++ Cp+C++++ +L  ++vk+e++   +d
  MMETSP1325-20131115|8126_1 16 VYVYDHCPFCVRVRLALGYKNVKHEVVFMAND 47
                8999*********************9977666 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 3.2
                 EEEE-STS CS
  PF00462.19   2 vvftkptC 9  
                 ++++k  C
  MMETSP1325-20131115|8126_1 194 MIYSKEAC 201
                 79***999 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.51
                 HHHHHHHHHTTHHEEEEETTTCHHHHHHHHHHH CS
  PF00462.19  13 kkakrlLdelgvkyeeidvdedpeireelkels 45 
                 k +k+++d +  + ++  ++e+++++  ++ ++
  MMETSP1325-20131115|8126_1 230 KGVKEYMDYHEKAADVXALLEHADLKCDIRMYT 262
                 678999999999999999999887776666665 PP

>> PF02798.15  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   4.9e-05      0.13       2      73 ..      15      83 ..      14      86 .. 0.73
   2 ?   -0.8   0.0      0.56   1.5e+03       6      33 ..     236     263 ..     234     274 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.9e-05
                EEEEESSSCHHHHHHHHHHHTT--EEEEEEGTTCCHCHHHHHHHHCTTTS-SSEEEET..TTEEEESHHHHHHH CS
  PF02798.15  2 tltlfnhrgraeslrillaekgveyeivrvdfeagegkspewlklnpkigrvPaledg..dglklteSlAIarY 73
                ++++++h  ++ ++r++l +k+v+ e+v+++ ++  +  p  l  ++     P+l+ +  d  ++ eSl I+++
  MMETSP1325-20131115|8126_1 15 KVYVYDHCPFCVRVRLALGYKNVKHEVVFMANDDVAT--PTALIGKKI---APILVMPndDMDPMPESLDICEF 83
                79**************************998433222..444444444...57777776555578888888775 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.56
                 ESSSCHHHHHHHHHHHTT--EEEEEEGT CS
  PF02798.15   6 fnhrgraeslrillaekgveyeivrvdf 33 
                  ++ + a+ + +ll++++++ +i+ ++ 
  MMETSP1325-20131115|8126_1 236 MDYHEKAADVXALLEHADLKCDIRMYTS 263
                 5667778889999*****9999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 1582.59
//
Query:       MMETSP1325-20131115|8135_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|8136_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|8137_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 364.06
//
Query:       MMETSP1325-20131115|8134_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   14.2   0.3       0.12   13.0   0.2    1.6  1  PF11653.3 Bacteriophage T7 virion assembly protein
       0.11   11.6   0.9        6.7    5.8   0.2    2.4  2  PF09866.4 Uncharacterized protein conserved in bacteria (DUF2093)


Domain annotation for each model (and alignments):
>> PF11653.3  Bacteriophage T7 virion assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   1.8e-05      0.12       1      60 [.     190     260 ..     190     269 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.8e-05
   PF11653.3   1 mgkkikkavkkvvkevekv.........akevkkaagGllGggedkakev..eakvPvaaaqvvevPkdkv 60 
                 m+k+ikka+k+ +k+   +         ++++ +    + Gg ++ a e   e + Pvaaa++  +P + +
  MMETSP1325-20131115|8134_1 190 MDKEIKKAMKRDTKNAALPfstelgdnrTRSMDRDKEAAEGGEMEMASEEqgEVQNPVAAAEMGSAPMGGS 260
                 9*************988778888999996666665566666655554444457799*****9999996655 PP

>> PF09866.4  Uncharacterized protein conserved in bacteria (DUF2093)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.2   0.00098       6.7      24      32 ..      43      51 ..      39      56 .. 0.86
   2 ?    3.8   0.0    0.0042        28      15      32 ..     120     137 ..     114     141 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.00098
   PF09866.4 24 YWsverQEA 32
                YWs e QEA
  MMETSP1325-20131115|8134_1 43 YWSDEVQEA 51
                ********9 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.0042
   PF09866.4  15 kkIpLdeLrYWsverQEA 32 
                 k++ L++  YWs +  EA
  MMETSP1325-20131115|8134_1 120 KEVFLEDCEYWSDDFLEA 137
                 67789*******987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       625  (0.0457139); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.57
# Mc/sec: 1127.94
//
Query:       MMETSP1325-20131115|8140_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 583.46
//
Query:       MMETSP1325-20131115|8139_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.029   14.3   0.0    1.7  1  PF13856.1 ATP-binding sugar transporter from pro-phage
      0.031   14.0   1.0      0.052   13.3   0.2    1.8  2  PF13585.1 C-terminal domain of CHU protein family


Domain annotation for each model (and alignments):
>> PF13856.1  ATP-binding sugar transporter from pro-phage
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   4.3e-06     0.029       3      83 ..      69     144 ..      67     149 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.3e-06
   PF13856.1   3 nlFdrlmaraDavilevmgkeatingkklkavfdealaelegghvaieGtartL.vvfssdvrkpkrgdrvvidgkkftVtr 83 
                 +++d ++  +D  i +++g  ++i  +    v d a +++       ++ + +L  + s+ +++ +++ rv++dgk+++V++
  MMETSP1325-20131115|8139_1  69 EAYDGAFVSVDVGIINTFGGGVNIWNTSGYFVHDTANKKER------YDASSHLrSLSSGAYYQRRTDSRVTVDGKTYVVDN 144
                 57889999999999999999999999999999999999998......7777777357788899999999***********97 PP

>> PF13585.1  C-terminal domain of CHU protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.4   9.7e+03       8      22 ..      12      26 ..      10      30 .. 0.74
   2 ?   13.3   0.2   7.6e-06     0.052      30      68 ..      89     125 ..      67     141 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 1.4
   PF13585.1  8 spngDgknDvfkieg 22
                + ++   nD+++ +g
  MMETSP1325-20131115|8139_1 12 TCDNSSANDYIDASG 26
                567778899988775 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 7.6e-06
   PF13585.1  30 eleifnrwGslVyesnnyknewdGtsngggkklpeGtYf 68 
                  ++i+n  G  V+++ n+k+++d++s+   ++l++G Y+
  MMETSP1325-20131115|8139_1  89 GVNIWNTSGYFVHDTANKKERYDASSHL--RSLSSGAYY 125
                 589**********************997..9*******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.32s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1407.22
//
Query:       MMETSP1325-20131115|8142_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        64  (0.0046811); expected 273.4 (0.02)
Passed bias filter:                       62  (0.00453482); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.53
# Mc/sec: 185.38
//
Query:       MMETSP1325-20131115|8138_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-25   89.9   0.0    1.6e-25   89.6   0.0    1.1  1  PF01987.12 Mitochondrial biogenesis AIM24


Domain annotation for each model (and alignments):
>> PF01987.12  Mitochondrial biogenesis AIM24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.6   0.0   1.2e-29   1.6e-25       6     215 .]      27     251 ..      23     251 .. 0.84

  Alignments for each domain:
  == domain 1    score: 89.6 bits;  conditional E-value: 1.2e-29
                 S-SS--EEEE------EEEE---EEEE-TTEEEE-TT----.--------TTT----TTEEEEE.E.-----EEE--S----.EEEE-----...-EEEE---EEEE.----EEEEEE---------.......----EEEEEE....----EEEE----EEEE---.---EEEEGGGEEEEETTSEEEEE----....-TTT-------EE.EEE....--.--EEEES-- CS
  PF01987.12   6 gdnasllevtLkpgeevyaeaGamvamsgkvefetklstgglggllkalkralggeslfqteft.aatgpgevllapsspgd.isvleLdgg..eallvqkgaflaa.spgvqldlsfaglgkglfg.......geglfltklt....GrGlvalssyGaivelelaegeelvvdpghvvAwsgtlnyevekvkgslsglksalfsGeglfl.eft....Gp.GkVllqsre 215
                 g+ + +l v+L+pge+   e G+m ++++ ++f+tk+s    +g+++ ++++ +ges f ++ft +++ + +v l p+ p   i++++L+++  + l ++ ga++ + s ++q+ + f + + + ++       g   + ++++     + +++l++ G+iv+++l++ge +++d ++++A++++++++ ++v g   +   ++f+Geg fl ++     Gp G +++q+++
  MMETSP1325-20131115|8138_1  27 GKLNGMLNVKLEPGESCCGEVGTMEYFQEGINFQTKMSA---KGIGGNISSWASGESPFRQTFTnESDKTLYVGLTPNQPLGtIIPIDLSQHqgNVLNARLGAYMGSmSTDIQTRVDFKRDSCTCMScmacccgGPSPIVQQIStnnpANSQAFLTAMGTIVKRRLEPGEIIKIDSDALIAFEDSVSFDAQQV-G---SCCLTFFGGEGCFLtTLMgkedGPgGDIWIQTYN 251
                 667789*****************************9964...45********************666669********98666******9986766777777777654677777777773333455566677757799999999777789*******************************************.5...4778899*******7777666677899****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 1290.35
//
Query:       MMETSP1325-20131115|8143_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 843.52
//
Query:       MMETSP1325-20131115|8145_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|8147_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|8144_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-08   32.7   0.1    7.9e-08   32.1   0.1    1.3  1  PF00307.26 Calponin homology (CH) domain
    0.00074   19.3   0.3     0.0021   17.8   0.0    1.9  2  PF04908.10 SH3-binding, glutamic acid-rich protein
    0.00097   18.9   0.1     0.0024   17.7   0.0    1.7  1  PF00462.19 Glutaredoxin
     0.0015   18.4   0.1     0.0043   16.9   0.1    1.8  1  PF06395.6  CDC24 Calponin


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.1   2.3e-11   7.9e-08      31     106 ..       2      74 ..       1      77 [. 0.91

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 2.3e-11
                 SHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS..-HHHHHTST-HHHHHHHHHHHHH CS
  PF00307.26  31 GvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvl..tledllysgnkknvlaflaeLfr 106
                 G++L++l ++++p+ +  ++i  + +e  ++++eN++++++++ e lgv+  +  ++ dl++++++  v+ +l++L  
  MMETSP1325-20131115|8144_1   2 GQVLCQLANAIKPGII--KKI--NDSEVKFKQMENISNFIKACIE-LGVEDRNcfETLDLYEEQDMGRVVSTLHSLSE 74 
                 89************65..888..555577****************.****99999*****99************9975 PP

>> PF04908.10  SH3-binding, glutamic acid-rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.6   5.4e+03      30      50 ..     110     131 ..     102     140 .. 0.59
   2 !   17.8   0.0   6.1e-07    0.0021       3      53 ..     166     216 ..     164     228 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.6
                 TT---EEEETTT.-HHHHHHHH CS
  PF04908.10  30 kkiefdevDitk.deeerelmr 50 
                 ++ ++ + D  + deee ++m 
  MMETSP1325-20131115|8144_1 110 NEYRYRNRDGGEeDEEEEKEML 131
                 5556666666665444444443 PP

  == domain 2    score: 17.8 bits;  conditional E-value: 6.1e-07
                 EEEEE-TT---HCHHHHHHHHHHHCTTTT---EEEETTT-HHHHHHHHHHS CS
  PF04908.10   3 lkvyvasssgskeikkkqqevlriLdakkiefdevDitkdeeerelmrena 53 
                 +k ++a++ ++ ++    ++++ +L+akk++++ v i  + e++++m+e +
  MMETSP1325-20131115|8144_1 166 VKLFSATTKSTSKLEGEERRMIYLLQAKKVKYEMVYIDVSPERKQEMYEAS 216
                 799999999999************************************877 PP

>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   6.9e-07    0.0024      16      54 ..     187     225 ..     184     232 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 6.9e-07
                 HHHHHHTTHHEEEEETTTCHHHHHHHHHHHSSBSSSEEE CS
  PF00462.19  16 krlLdelgvkyeeidvdedpeireelkelsgwrtvPqvf 54 
                   lL+ ++vkye + +d  pe ++e+ e s+   +Pq+ 
  MMETSP1325-20131115|8144_1 187 IYLLQAKKVKYEMVYIDVSPERKQEMYEASETYALPQLH 225
                 5689*********************************74 PP

>> PF06395.6  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   1.3e-06    0.0043      13      82 ..       2      66 ..       1      73 [. 0.77

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.3e-06
   PF06395.6 13 GspLlvlfNalkpeeklevdevssddak.kcKksvykFleackkeLgfedeelftisdlfsddttglvkvl 82
                G+ L+ l Na+kp    ++   + +++k k  +++ +F++ac  eLg+ed ++f   dl++++  ++ +v+
  MMETSP1325-20131115|8144_1  2 GQVLCQLANAIKPGIIKKI---NDSEVKfKQMENISNFIKACI-ELGVEDRNCFETLDLYEEQ--DMGRVV 66
                889***********99999...33344403446799******7.7***************985..444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.54
# Mc/sec: 1353.50
//
Query:       MMETSP1325-20131115|8146_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 733.00
//
Query:       MMETSP1325-20131115|8149_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.9e-15   54.6   4.8      1e-14   54.2   3.3    1.1  1  PF08592.6 Domain of unknown function (DUF1772)


Domain annotation for each model (and alignments):
>> PF08592.6  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   3.3   7.6e-19     1e-14      37     137 ..      10     103 ..       2     105 .. 0.78

  Alignments for each domain:
  == domain 1    score: 54.2 bits;  conditional E-value: 7.6e-19
   PF08592.6  37 mpvlalltalafaylavaalsgsrgpaarlllaaaaalllgivpvTllanvPtNnkLaaadvakkk.eaaaadwveellskWtrlnlvRtvlalaaflllll 137
                  +v+++++++  +++av       + ++ l ++aa a++ g v++T l+nvP+Nn La++dv++++ ++ +++w   + +kW+++n+vRtvl ++a+l ++l
  MMETSP1325-20131115|8149_1  10 IVVWMAMVLVG-IAAAV------LADGSILSVLAAFAYTTGAVLITGLGNVPLNNHLASVDVDDDDtTDLQEVW-NVYSEKWGVYNVVRTVLFFLAALGFAL 103
                 44555555555.33333......35678999**************************99998765515566777.99********************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       680  (0.0497367); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 751.80
//
Query:       MMETSP1325-20131115|8152_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   12.4   0.8       0.15   12.4   0.6    1.8  2  PF07721.9 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.37     5e+03       4       8 ..       4       8 ..       2      10 .. 0.52
   2 ?   12.4   0.6   1.1e-05      0.15       5      22 ..      29      46 ..      28      47 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.37
               H---H CS
   PF07721.9 4 llaLA 8
               + +LA
  MMETSP1325-20131115|8152_1 4 QRWLA 8
               44555 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 1.1e-05
                ---HHHHHH-------HH CS
   PF07721.9  5 laLArallalGdldeAra 22
                ++LA+a++++G+ d A++
  MMETSP1325-20131115|8152_1 29 VWLAEAMALAGEGDGAAE 46
                58**************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 234.94
//
Query:       MMETSP1325-20131115|8151_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-27   96.4   0.0    1.3e-27   96.3   0.0    1.0  1  PF07258.9 HCaRG protein


Domain annotation for each model (and alignments):
>> PF07258.9  HCaRG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.3   0.0   9.8e-32   1.3e-27       3     178 .]      21     199 ..      19     199 .. 0.97

  Alignments for each domain:
  == domain 1    score: 96.3 bits;  conditional E-value: 9.8e-32
   PF07258.9   3 llnklssskfkellrqvlesllgkenie...kveklaadakieeeelkalvaalstllksaakhdvdeeqlsaeLeqlklpkehaealskvykenkkklreslaktslrlphLedlsWRvdvklssselqevnsPvilleLklqngggssetvtfelseeklqellkelkeaqkeleal 178
                 + +++++ +++el++ vle ll+ +++    k+  +a+++++++  lk + ++l  +++ a+kh++ ++q+ a+ e l+l+ + + a+  ++++ +  l  +  ++++  +++ d++W+++v+++s+++++v   ++ l+L +  g+g+ e+v +e+s++++ ++ + +++a+ +l+ l
  MMETSP1325-20131115|8151_1  21 NASNFNQTQLPELVNLVLELLLDPNGSGfqeKLGAFASKYGVNAPALKNVARGLVIFFRGATKHNLGPAQVAADCEALGLNADATSAIKGCWESYYAGLAGAQVEKTIMANQVIDMEWKFGVTAASNQVAQVGATFLHLKLVIDRGNGRHEDVFMEMSLPQFFQFMADMEKAKTHLDFL 199
                 56789999**************9999888889999999999**************************************************************************************************************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 1003.47
//
Query:       MMETSP1325-20131115|8155_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       750  (0.0548566); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 972.64
//
Query:       MMETSP1325-20131115|8157_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|8158_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        82  (0.00599766); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|8154_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 806.47
//
Query:       MMETSP1325-20131115|8159_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.016   14.9   0.0      0.038   13.7   0.0    1.6  1  PF07647.12 SAM domain (Sterile alpha motif)
      0.029   13.7   0.0      0.057   12.8   0.0    1.5  1  PF03358.10 NADPH-dependent FMN reductase
      0.063   13.3   0.1      0.091   12.8   0.1    1.3  1  PF13676.1  TIR domain
      0.067   13.2   0.0       0.13   12.3   0.0    1.5  1  PF00536.25 SAM domain (Sterile alpha motif)


Domain annotation for each model (and alignments):
>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.1e-05     0.038      25      61 ..       5      40 ..       2      43 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.1e-05
                HHHHTS-SCTCCCSSCHHHHH.CCCHHCHHHHHHHHHH CS
  PF07647.12 25 FrdqgitggelllrlteedLk.rlGitsvghrkkilkk 61
                + ++gi++  +l  +te++Lk ++G  ++gh + + +k
  MMETSP1325-20131115|8159_1  5 LAENGIDTVAALRAVTEDELKnDMGL-KFGHARLL-RK 40
                678***********************.****5544.43 PP

>> PF03358.10  NADPH-dependent FMN reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.7e-05     0.057      55      86 ..      93     125 ..      57     132 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.7e-05
                 --STCCHCHHHHHHHH-S.EEEEEEEECTTCE- CS
  PF03358.10  55 gqtsddlqellekvaaad.gviivtPeYngsys 86 
                  q++ +++ ++ k ++ad +v++ tPeY+g ++
  MMETSP1325-20131115|8159_1  93 AQKDGWFEVWSGKARQADyIVVLFTPEYKGRFT 125
                 678999************888899*****9887 PP

>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.7e-05     0.091      12      78 ..      72     139 ..      60     162 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.7e-05
   PF13676.1  12 laealaeaLeragirvfldrdiapgedwaeeiekalrradvvlvllspaylas..dwvrkEleaakelg 78 
                 l +a+++a  rag++ + + + a  + w e    + r+ad+++vl++p+y  +  +  +kE+++++el+
  MMETSP1325-20131115|8159_1  72 LLDAVHAAVDRAGME-WTSGHTAQKDGWFEVWSGKARQADYIVVLFTPEYKGRftEALWKEAQCVHELH 139
                 445566666666666.555667778889999999*****************998778888999997744 PP

>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.8e-05      0.13      25      61 ..       7      43 ..       2      44 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.8e-05
                HCT--SHHHHTT--HHHHHH.H-------HHHHHHHHH CS
  PF00536.25 25 rageidgdallllteedLek.lgvtllGHrkkIlssIq 61
                ++g +++ al   te++L++ +g + +GH+  + ++I+
  MMETSP1325-20131115|8159_1  7 ENGIDTVAALRAVTEDELKNdMGLK-FGHARLLRKAIS 43
                789999**************88885.5***99999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 826.98
//
Query:       MMETSP1325-20131115|8163_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 331.13
//
Query:       MMETSP1325-20131115|8153_1  [L=636]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       543  (0.0397162); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.99u 0.35s 00:00:01.34 Elapsed: 00:00:00.65
# Mc/sec: 2344.74
//
Query:       MMETSP1325-20131115|8162_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   12.1   0.9       0.16   11.6   0.6    1.1  1  PF03762.12 Vitelline membrane outer layer protein I (VOMI)


Domain annotation for each model (and alignments):
>> PF03762.12  Vitelline membrane outer layer protein I (VOMI)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.6   1.2e-05      0.16     102     162 ..       5      63 ..       2      71 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.2e-05
                 ----EEEEEEEE.......TTS-EE---------------......---B---EEEEES-- CS
  PF03762.12 102 ddagitnlaakCgrpqddrstrrrllerkkndskygyWrsiqfCpkgsvviGitekiesek 162
                 d  +i++  a C+  + d ++ r+++++   ++  g+W+    Cp g+ v+Gi ++ +++ 
  MMETSP1325-20131115|8162_1   5 DSSAIQSNCAACELLYWDAEKGRQIHSDP-AIEADGQWDTWT-CPLGFPVMGIWQQSQDST 63 
                 77788888888988899999999999777.5789*****987.**********99988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 709.86
//
Query:       MMETSP1325-20131115|8161_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.1   0.0        5.8    6.6   0.0    2.1  2  PF04513.7 Baculovirus polyhedron envelope protein, PEP, C terminus


Domain annotation for each model (and alignments):
>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0    0.0042        58      46      79 ..      33      71 ..      25      80 .. 0.72
   2 ?    6.6   0.0   0.00043       5.8      94     133 ..     123     162 ..      90     166 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.0042
   PF04513.7 46 qLnalsedlksllaeldt.....rldtlltnLtdalnal 79
                +++++++dl s++++++t     +++t++++L++al ++
  MMETSP1325-20131115|8161_1 33 SVDQIKDDLLSSVEAVSTtsdsaQVKTFMATLKSALSSV 71
                556666666666666666666678888888888888765 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.00043
   PF04513.7  94 ltnLlssvtNinstLnnllqalnnldlgalsqeledaldt 133
                 +t  + +vt   ++L +++qa+  + +g+  +e++  ++ 
  MMETSP1325-20131115|8161_1 123 VTAPNPQVTAFMTALRGIIQAVPTTGNGEACHEAKRHTNA 162
                 4455679******************999999998887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1026  (0.0750439); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                        44  (0.00321826); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.06u 0.40s 00:00:01.46 Elapsed: 00:00:00.68
# Mc/sec: 863.39
//
Query:       MMETSP1325-20131115|8165_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   13.9   0.1       0.42   10.7   0.0    2.1  2  PF12613.3 Flagellin structural protein


Domain annotation for each model (and alignments):
>> PF12613.3  Flagellin structural protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.1e-05      0.42      24      52 ..      31      59 ..      24      60 .. 0.85
   2 ?    1.0   0.0     0.033   4.5e+02       4      15 ..      64      75 ..      62     103 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 3.1e-05
   PF12613.3 24 lsaAsltaitnavaQiNAVNkPaTVSnLd 52
                +  A  ++ + + +Qi AV +P+ V nL+
  MMETSP1325-20131115|8165_1 31 TGSAGEANSVRSPTQIAAVAEPQPVMNLE 59
                5678888889999**************96 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.033
   PF12613.3  4 agtGtAvtaltl 15
                 g+G++vt+  +
  MMETSP1325-20131115|8165_1 64 GGNGAPVTQYRV 75
                699999996544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 534.19
//
Query:       MMETSP1325-20131115|8166_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 265.13
//
Query:       MMETSP1325-20131115|8164_1  [L=396]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       829  (0.0606349); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.40s 00:00:01.17 Elapsed: 00:00:00.86
# Mc/sec: 1103.44
//
Query:       MMETSP1325-20131115|8167_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-12   45.3   0.9    7.2e-12   45.0   0.6    1.2  1  PF00156.22 Phosphoribosyl transferase domain
  ------ inclusion threshold ------
       0.03   13.9   0.4      0.041   13.4   0.3    1.2  1  PF01472.15 PUA domain


Domain annotation for each model (and alignments):
>> PF00156.22  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.6   1.1e-15   7.2e-12      84     125 .]       3      44 ..       1      44 [. 0.95

  Alignments for each domain:
  == domain 1    score: 45.0 bits;  conditional E-value: 1.1e-15
                 GGGTTSEEEEEEEEE----HHHH---TTTT----EEEEEEEE CS
  PF00156.22  84 edlkgkrvliVDDvlatGgTlraaielLkeagakevgvavlv 125
                 ++ +g+rvl++DD++atGgTl +aiel++ ag+++v++a++v
  MMETSP1325-20131115|8167_1   3 AIKEGERVLVIDDLVATGGTLSSAIELVRMAGGEVVECACIV 44 
                 6789************************************97 PP

>> PF01472.15  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3     6e-06     0.041      29      69 ..       2      39 ..       1      43 [. 0.93

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6e-06
                TT-------EEEETT--EEEE-EESS-HHHHHHHHT---EE CS
  PF01472.15 29 gdfregdeVvivtedgelvavGlanysseelakikggksvk 69
                + ++eg+ V +++    lva+G ++ s+ el +++gg +v+
  MMETSP1325-20131115|8167_1  2 DAIKEGERVLVIDD---LVATGGTLSSAIELVRMAGGEVVE 39
                5699**********...********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 345.24
//
Query:       MMETSP1325-20131115|8168_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.44s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|8171_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 549.17
//
Query:       MMETSP1325-20131115|8169_1  [L=325]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.056   13.1  17.5       0.28   10.8   0.7    4.3  4  PF05597.6  Poly(hydroxyalcanoate) granule associated protein (phasin)
      0.061   13.2   6.3         13    5.7   0.0    3.9  3  PF06013.7  Proteins of 100 residues with WXG
       0.12   12.6  21.4        1.2    9.4   1.1    3.5  3  PF09177.6  Syntaxin 6, N-terminal
        1.6    8.4   8.6         24    4.6   0.0    3.2  3  PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
        2.6    8.2  12.9       0.99    9.5   1.5    3.1  2  PF09267.5  Dictyostelium STAT, coiled coil
        3.5    6.4   6.3        1.5    7.6   1.7    1.9  2  PF01494.14 FAD binding domain
        7.7    6.2  35.6       0.18   11.5  11.5    3.3  3  PF09744.4  JNK_SAPK-associated protein-1


Domain annotation for each model (and alignments):
>> PF05597.6  Poly(hydroxyalcanoate) granule associated protein (phasin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.2     0.064   1.3e+02      57     100 ..       7      50 ..       2      63 .. 0.77
   2 ?    4.1   3.1     0.017        34      85     129 ..      83     126 ..      44     129 .. 0.66
   3 ?   10.8   0.7   0.00014      0.28      27     101 ..     147     227 ..     146     232 .. 0.76
   4 ?    2.1   0.0     0.067   1.3e+02      64     103 ..     275     316 ..     266     322 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.064
   PF05597.6  57 klaeeqveevkesvkskveevkekaeeqwdklekafdervakaL 100
                 k+  e +ee+  +++ +++e++e+ e +++++e af +  ++ L
  MMETSP1325-20131115|8169_1   7 KQQSEDIEELLGRMRREFKELQEEYEIELENIEGAFMTEREELL 50 
                 4455666666688999999**************99977655555 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.017
   PF05597.6  85 wdklekafdervakaLnrLgvpskkdveaLsakideLtaklekla 129
                  +++e ++ +   +  n+L++  ++d+++L+++++e++a  +  +
  MMETSP1325-20131115|8169_1  83 QQEIEDLIVHDH-EEYNKLKIKLETDIQTLEQQLEEMQATYQLNT 126
                 445555555443.34599999999999999999999999877555 PP

  == domain 3    score: 10.8 bits;  conditional E-value: 0.00014
   PF05597.6  27 LGAfakaqeeGsklfeeLVkeGeelekktkklaeeqveevk......esvkskveevkekaeeqwdklekafdervakaLn 101
                 LG +++ q++ ++ +++LV++ +e+ ++ +k+ +e +ee +      ++++ k+ +++ + +++ d+l ++ de v k+++
  MMETSP1325-20131115|8169_1 147 LGSLKRKQNKLKDTLSALVQRYHETDTRDRKKNDELTEEYRritkqyKDLQAKFRHFELSDNKRFDQLWAMHDEEVMKTID 227
                 8999************************************94444444444444444445556666777777777776665 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.067
   PF05597.6  64 eevkesvkskveevkekaeeqwd..klekafdervakaLnrL 103
                 +e+++ + ++v+ +k ka  ++   +   ++d+rv++aL++L
  MMETSP1325-20131115|8169_1 275 AEAEDPAAKMVSGAKMKAVLELLasEAGFLVDKRVKAALESL 316
                 5667777888888888888777612444588********988 PP

>> PF06013.7  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0067        13      14      41 ..       4      31 ..       3      32 .. 0.88
   2 ?    5.1   0.2      0.01        20      16      42 ..      97     123 ..      93     128 .. 0.84
   3 ?    3.2   0.2     0.041        81      24      83 ..     144     202 ..     122     205 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0067
   PF06013.7 14 krfqkaaeelesilqrlkaqidalqsgW 41
                k++++++e++e+ l r++++ ++lq ++
  MMETSP1325-20131115|8169_1  4 KSLKQQSEDIEELLGRMRREFKELQEEY 31
                56899*****************999876 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.01
   PF06013.7  16 fqkaaeelesilqrlkaqidalqsgWs 42 
                 ++k +  le+ +q+l++q++++q++++
  MMETSP1325-20131115|8169_1  97 YNKLKIKLETDIQTLEQQLEEMQATYQ 123
                 667777899999999999999999876 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.041
   PF06013.7  24 esilqrlkaqidalqsgWsGaaadafqaafeewkqaaeklveaLeeisealkqaaekyed 83 
                 +++l +lk+++++l+++ s    ++++++ ++ +++ ++l e++  i+++ k+  +k+++
  MMETSP1325-20131115|8169_1 144 SNTLGSLKRKQNKLKDTLSAL-VQRYHETDTRDRKKNDELTEEYRRITKQYKDLQAKFRH 202
                 556666666666666666544.56666666666777777777777777777777777766 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.6     0.029        56      36      93 ..       5      57 ..       2      61 .. 0.73
   2 ?    9.4   3.3   0.00064       1.2      20      82 ..      81     139 ..      66     153 .. 0.71
   3 ?    9.4   1.1   0.00063       1.2      20      72 ..     160     211 ..     147     231 .. 0.70

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.029
   PF09177.6 36 elkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrRkqfvaeireei 93
                +lk++ +++e+ l+ ++++ ++L+e+ ++     e  +++ + +++R++++++ ++ei
  MMETSP1325-20131115|8169_1  5 SLKQQSEDIEELLGRMRREFKELQEEYEIE---LE--NIEGAFMTEREELLSANKSEI 57
                678999999999999999999999999992...22..366666666666666666666 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00064
   PF09177.6  20 lyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrR 82 
                 +y++  e++  + +++e ++l+ +Le+ ++++e++le+++ + ++   n ek + + + +++R
  MMETSP1325-20131115|8169_1  81 TYQQEIEDLIVH-DHEEYNKLKIKLETDIQTLEQQLEEMQATYQL---NTEKLEYNYRVLTER 139
                 343333333333.5899************************9998...555544444444444 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.00063
   PF09177.6  20 lyrsweelrsdstsskelkeltkeLenalesiewdledLeeavsvvekn.pekf 72 
                 +++ + +   +++  ++  ++++eL+++++ i+++++dL+   +  e + +++f
  MMETSP1325-20131115|8169_1 160 TLSALVQRYHETD--TRDRKKNDELTEEYRRITKQYKDLQAKFRHFELSdNKRF 211
                 3333333333333..44468999*****************99998887634444 PP

>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.012        24      58      92 ..       6      40 ..       2      55 .. 0.82
   2 ?    4.2   0.7     0.016        32      48      85 ..      80     117 ..      70     130 .. 0.79
   3 ?    2.7   0.2     0.046        91      27      81 ..     141     198 ..     133     206 .. 0.68

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.012
   PF04513.7 58 laeldtrldtlltnLtdalnalqdtlrneLtnlns 92
                l+++++++++ll ++ +  ++lq++ + eL+n++ 
  MMETSP1325-20131115|8169_1  6 LKQQSEDIEELLGRMRREFKELQEEYEIELENIEG 40
                66778889999999999999999999999999875 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.016
   PF04513.7  48 nalsedlksllaeldtrldtlltnLtdalnalqdtlrn 85 
                 ++ ++++++l+ + +++ ++l  +L++ +++l+++l++
  MMETSP1325-20131115|8169_1  80 ETYQQEIEDLIVHDHEEYNKLKIKLETDIQTLEQQLEE 117
                 56788999999999999999999999999999988764 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.046
   PF04513.7  27 lqnvqilaqlatlldaietqLnalsedlksllaeldt.....rldtlltnLtdalnalqd 81 
                 + n+++l+ l++  ++++ +L+al ++ ++  +   +     +l++   ++t++ + lq 
  MMETSP1325-20131115|8169_1 141 NENSNTLGSLKRKQNKLKDTLSALVQRYHETDTR--DrkkndELTEEYRRITKQYKDLQA 198
                 5688888999999999999999988877763332..223455666666666666666665 PP

>> PF09267.5  Dictyostelium STAT, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   2.5     0.061   1.2e+02      32      70 ..      78     116 ..      53     130 .. 0.76
   2 ?    9.5   1.5   0.00051      0.99      36      69 ..     139     172 ..     114     209 .. 0.79

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.061
                 S-SS-SCCCCHHHHHHHHHHHHH---HHHHHHHHHHHH- CS
   PF09267.5  32 lsntldenskeilksLdseqitLkkqleaelsaLdqlkk 70 
                 + +t++++ ++ +   ++e ++Lk +le+++++L+q  +
  MMETSP1325-20131115|8169_1  78 REETYQQEIEDLIVHDHEEYNKLKIKLETDIQTLEQQLE 116
                 556777777777777788999999999999999988654 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00051
                 -SCCCCHHHHHHHHHHHHH---HHHHHHHHHHHH CS
   PF09267.5  36 ldenskeilksLdseqitLkkqleaelsaLdqlk 69 
                  d+++ ++l sL+ +q++Lk++l a ++  ++++
  MMETSP1325-20131115|8169_1 139 RDNENSNTLGSLKRKQNKLKDTLSALVQRYHETD 172
                 489999*****************99888776665 PP

>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   1.7   0.00078       1.5      91     153 ..      64     127 ..      26     137 .. 0.72
   2 ?    0.3   0.1      0.13   2.5e+02     226     273 ..     153     201 ..     133     211 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00078
                 EEEEECC.CHGGTT-CCE--ECCCCCCHHHHHHC--.EEESS-CECCSCCCHHHHHHCCCCEE-- CS
  PF01494.14  91 karadle.lesspervtvypqteleriLvehaeerg.lqvrfktevlsleqdeegvtavvrdket 153
                 +++ +l  +e++ +r ++y q e+e ++v++ ee   l+++ +t++++leq+ e+ +a+++ +++
  MMETSP1325-20131115|8169_1  64 RRESELAyMEAKQKREETYQQ-EIEDLIVHDHEEYNkLKIKLETDIQTLEQQLEEMQATYQLNTE 127
                 333333335688888888766.555555555566666*********************9986554 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.13
                 CCTTEEEEEE-B-TT--GGGSGHHHHHHHHHHHCHHHHCCT.--EEEEE CS
  PF01494.14 226 esanlerfyvqvearaekeersekfteeevkarlreavgek.tldveie 273
                 ++++l++ +  +  r+++++++++ +++e+++++r++++++ +l+++++
  MMETSP1325-20131115|8169_1 153 KQNKLKDTLSALVQRYHETDTRDRKKNDELTEEYRRITKQYkDLQAKFR 201
                 44567777888888999999999999999*9999999987613444555 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   3.8       1.2   2.3e+03      54      94 ..       8      49 ..       3      78 .. 0.60
   2 ?   11.5  11.5   9.3e-05      0.18      52     142 ..      79     170 ..      56     174 .. 0.85
   3 ?    4.9   1.1    0.0097        19      84     127 ..     179     222 ..     172     236 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 1.2
   PF09744.4 54 lleedkerLskqyere.kelrkqaeekllelEdeleqekkel 94
                  +ed+e+L   ++re kel+++ e +l ++E ++  e+ el
  MMETSP1325-20131115|8169_1  8 QQSEDIEELLGRMRREfKELQEEYEIELENIEGAFMTEREEL 49
                345666666666666556666666666666666666666655 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 9.3e-05
   PF09744.4  52 lelleedkerLskqyere.kelrkqaeekllelEdeleqekkelekkieeleeevrqlelkaknlsdkvsrLeeretelkkeyeslheretk 142
                 +e  ++++e+L+++++ e ++l+ + e  +  lE++le+++ +++ + e+le + r l  +    s++  +L+ ++++lk  +++l +r+ +
  MMETSP1325-20131115|8169_1  79 EETYQQEIEDLIVHDHEEyNKLKIKLETDIQTLEQQLEEMQATYQLNTEKLEYNYRVLTERDNENSNTLGSLKRKQNKLKDTLSALVQRYHE 170
                 455667788887766555277888899********************************999999************************976 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.0097
   PF09744.4  84 EdeleqekkelekkieeleeevrqlelkaknlsdkvsrLeeret 127
                  del +e + ++k+ ++l+++ r++el      d+   + ++e 
  MMETSP1325-20131115|8169_1 179 NDELTEEYRRITKQYKDLQAKFRHFELSDNKRFDQLWAMHDEEV 222
                 58899999999999999999999999998888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2124  (0.155354); expected 273.4 (0.02)
Passed bias filter:                      505  (0.0369368); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.17u 0.37s 00:00:01.54 Elapsed: 00:00:00.63
# Mc/sec: 1236.22
//
Query:       MMETSP1325-20131115|8172_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0073   16.1   5.2     0.0073   16.1   3.6    1.6  2  PF00170.16 bZIP transcription factor
     0.0092   15.6   4.6      0.024   14.3   3.2    1.7  1  PF07716.10 Basic region leucine zipper
     0.0094   15.8   2.2      0.012   15.5   1.6    1.1  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
  ------ inclusion threshold ------
      0.023   12.9   5.4      0.037   12.2   3.7    1.4  1  PF09730.4  Microtubule-associated protein Bicaudal-D
      0.036   13.2   6.6      0.059   12.5   4.6    1.4  1  PF09789.4  Uncharacterized coiled-coil protein (DUF2353)
      0.036   12.5   4.4      0.049   12.0   3.1    1.2  1  PF05701.6  Plant protein of unknown function (DUF827)
       0.05   13.1   3.0      0.093   12.3   2.1    1.4  1  PF07558.6  Shugoshin N-terminal coiled-coil region
      0.065   11.9   2.5      0.079   11.6   1.7    1.0  1  PF04108.7  Autophagy protein Apg17
       0.14   12.5   4.8       0.17   12.2   2.2    1.9  1  PF12711.2  Kinesin motor
       0.15   12.3   5.6       0.13   12.5   1.1    2.0  2  PF06156.8  Protein of unknown function (DUF972)
       0.22   11.2   3.8       0.23   11.2   1.7    1.7  2  PF07989.6  Microtubule associated
        0.3   11.0   2.6        0.5   10.2   1.8    1.5  1  PF12443.3  AT-hook-containing transcription factor
        0.3   10.8   2.8        1.8    8.4   1.9    2.1  1  PF04899.7  MbeD/MobD like
       0.37   10.3   3.8       0.46   10.0   2.6    1.1  1  PF03962.10 Mnd1 family
       0.48    8.9   4.8       0.59    8.6   3.3    1.0  1  PF11917.3  Protein of unknown function (DUF3435)
       0.67    9.3   3.6       0.28   10.5   0.8    1.6  1  PF04977.10 Septum formation initiator
        8.9    6.5   9.3         22    5.3   6.4    1.7  1  PF06005.7  Protein of unknown function (DUF904)


Domain annotation for each model (and alignments):
>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.5     2e+03      44      54 ..      42      52 ..      22      56 .. 0.61
   2 !   16.1   3.6   9.1e-06    0.0073      22      57 ..      59      94 ..      51     100 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 2.5
                ......HHHHH CS
  PF00170.16 44 aLkkeleelkk 54
                +L+ +le  kk
  MMETSP1325-20131115|8172_1 42 TLRHKLEVTKK 52
                44445544444 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 9.1e-06
                HHHHHHHHHHHHHHHHHHHHH.......HHHHHHHH CS
  PF00170.16 22 qRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
                qRK+ e  +L +++ eL +eN +Lk ++++l++ ++
  MMETSP1325-20131115|8172_1 59 QRKLNENSQLMKECNELRNENITLKRKVDHLRQVIK 94
                8******************************99876 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   3.2   2.9e-05     0.024      21      53 ..      59      91 ..      56      92 .. 0.95

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.9e-05
  PF07716.10 21 ekkkakeeeleervkeLeeeNaqLrqkveqLek 53
                ++k  ++ +l+++ +eL++eN +L++kv+ L++
  MMETSP1325-20131115|8172_1 59 QRKLNENSQLMKECNELRNENITLKRKVDHLRQ 91
                699999***********************9986 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   1.6   1.5e-05     0.012      24      99 ..      19      95 ..      15      98 .. 0.91

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.5e-05
                THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT...HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17 24 dkedvdelleldeerrelqveleelqaerNelskeIgkakkkk.edaeeliaevkelkeelkaleaelkeleaelek 99
                d+e+ ++l e++++r  +q  +  l+++     ke g+  ++k ++ ++l++e +el +e  +l+ +++ l++ +++
  MMETSP1325-20131115|8172_1 19 DPELQESLQEAYQQRDCVQRLAGTLRHKLEVTKKEAGRRGQRKlNENSQLMKECNELRNENITLKRKVDHLRQVIKD 95
                6778889999999999999999******************999*999*********************999988776 PP

>> PF09730.4  Microtubule-associated protein Bicaudal-D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   3.7   4.6e-05     0.037      89     124 ..      61      97 ..      17     100 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.6e-05
   PF09730.4  89 KvrE.arllqdysELEEENisLQKqvsvLkqsQVEfE 124
                 K  E ++l++++ EL  ENi+L+++v  L+q   +fE
  MMETSP1325-20131115|8172_1  61 KLNEnSQLMKECNELRNENITLKRKVDHLRQVIKDFE 97 
                 33331689999********************888888 PP

>> PF09789.4  Uncharacterized coiled-coil protein (DUF2353)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   4.6   7.3e-05     0.059      21     114 ..      29      98 ..      17     102 .] 0.47

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.3e-05
   PF09789.4  21 cqrErdqfklkvetLqervsnlkkserelelkaarqgdsklkpeskrkalsqlleesreeNkqLstdveeLrqrlkelqeDikllRetiaklrv 114
                   + rd  +  + tL+++ +  kk       +a r g+ kl+   ++++l++  +e r+eN+ L+  v+ Lrq +k+               ++
  MMETSP1325-20131115|8172_1  29 AYQQRDCVQRLAGTLRHKLEVTKK-------EAGRRGQRKLN---ENSQLMKECNELRNENITLKRKVDHLRQVIKDF--------------EA 98 
                 444444444444444422222222.......12233333332...555666666666666666666666666666555..............44 PP

>> PF05701.6  Plant protein of unknown function (DUF827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.1   6.1e-05     0.049     270     333 ..      21      81 ..      20     100 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6.1e-05
   PF05701.6 270 eakanlekaaeeekslrslvesLkqeLeeekkelee.lkekekeaeeavssLeaelsrtkselea 333
                 e +++l++a++   +++ l+++L+ +Le +kke  +  ++k++e++    +L +e +  + e  +
  MMETSP1325-20131115|8172_1  21 ELQESLQEAYQQRDCVQRLAGTLRHKLEVTKKEAGRrGQRKLNENS----QLMKECNELRNENIT 81 
                 567899999999999999*********9999987550555566666....677777777766444 PP

>> PF07558.6  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.1   0.00012     0.093      24      44 ..      66      86 ..      63      87 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00012
   PF07558.6 24 selekevskLlnENvnLRell 44
                s+l ke+++L+nEN++L+ ++
  MMETSP1325-20131115|8172_1 66 SQLMKECNELRNENITLKRKV 86
                578899999999999998765 PP

>> PF04108.7  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.7   9.8e-05     0.079      29     103 ..      23      96 ..      18     101 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.8e-05
   PF04108.7  29 rqeLeesvkssaklkflvkglkeQlklLekkvrsealiekekgqselaellkeLdaadarLektlkvLrktkvel 103
                 +++L+e+  ++  ++ l+  l++ l++ +k   +++  +k +++s+l +  +eL   +  L++++++Lr+++ ++
  MMETSP1325-20131115|8172_1  23 QESLQEAYQQRDCVQRLAGTLRHKLEVTKK-EAGRRGQRKLNENSQLMKECNELRNENITLKRKVDHLRQVIKDF 96 
                 67889999999999****************.999999999******************************98775 PP

>> PF12711.2  Kinesin motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.2   0.00021      0.17      14      48 ..      60      94 ..      44     101 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00021
   PF12711.2 14 gslsaeslleeeneeLkeEiklLreqveknpevtr 48
                 +l ++s l++e +eL++E  +L+ +v++  +v +
  MMETSP1325-20131115|8172_1 60 RKLNENSQLMKECNELRNENITLKRKVDHLRQVIK 94
                57788899999999999999999999999988876 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.4      0.16   1.3e+02      26      65 ..      21      60 ..      19      67 .. 0.71
   2 ?   12.5   1.1   0.00016      0.13      21      57 ..      62      98 ..      56     102 .] 0.85

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.16
   PF06156.8 26 elkkelkelleenaelkleneklrerleeleeeekkkekk 65
                el+++l+e +++   ++    +lr++le +++e+ ++ ++
  MMETSP1325-20131115|8172_1 21 ELQESLQEAYQQRDCVQRLAGTLRHKLEVTKKEAGRRGQR 60
                6788888888888888888889999998887744444333 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 0.00016
   PF06156.8 21 leeleelkkelkelleenaelkleneklrerleelee 57
                l+e ++l ke++el +en +lk ++++lr+ +++ e+
  MMETSP1325-20131115|8172_1 62 LNENSQLMKECNELRNENITLKRKVDHLRQVIKDFEA 98
                6778899999*******************99998876 PP

>> PF07989.6  Microtubule associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.8   1.5e+03      45      45 ..      33      33 ..      21      57 .. 0.54
   2 ?   11.2   1.7   0.00028      0.23      32      71 ..      59      98 ..      45     101 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 1.8
   PF07989.6 45 n 45
                 
  MMETSP1325-20131115|8172_1 33 R 33
                1 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00028
   PF07989.6 32 kraeesveellkenielkvevetlkrelkekkklLkkaek 71
                +r+ +++ +l+ke  el+ e  tlkr+++++++ +k+ e 
  MMETSP1325-20131115|8172_1 59 QRKLNENSQLMKECNELRNENITLKRKVDHLRQVIKDFEA 98
                666788999************************9999775 PP

>> PF12443.3  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.8   0.00062       0.5      33      77 ..      51      95 ..      21     101 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00062
   PF12443.3 33 qkdasksssyifqkirelkaeiykLkeqleeLkekvdetskeikq 77
                +k+a +   + +++ ++l +e+  L++    Lk kvd   + ik 
  MMETSP1325-20131115|8172_1 51 KKEAGRRGQRKLNENSQLMKECNELRNENITLKRKVDHLRQVIKD 95
                444555566788888999999999999888999998888887775 PP

>> PF04899.7  MbeD/MobD like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   1.9    0.0022       1.8      13      68 ..      24      89 ..      21      99 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0022
   PF04899.7 13 EqLQqdYeqrlqeWesafaelqrmfeltqrena...........aLseqvtgLsqQVesLseqvrRl 68
                E+LQ++Y+qr    +     l++  e+t++e +           +L + +++L      L ++v+ l
  MMETSP1325-20131115|8172_1 24 ESLQEAYQQRDC-VQRLAGTLRHKLEVTKKEAGrrgqrklnensQLMKECNELRNENITLKRKVDHL 89
                99*****88855.56666889*********9999999988888855555555555444455444443 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   2.6   0.00057      0.46      66     129 ..      21      89 ..      15      99 .. 0.63

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00057
  PF03962.10  66 klkteleklkkeleelkqrikelqaeiekekkkreet.....eereelleelkeleeelkklkkelekl 129
                 +l+++l+++ ++ + +++   +l+ ++e +kk+         +e ++l++e++el++e+  lk+++  l
  MMETSP1325-20131115|8172_1  21 ELQESLQEAYQQRDCVQRLAGTLRHKLEVTKKEAGRRgqrklNENSQLMKECNELRNENITLKRKVDHL 89 
                 556666666666666666666666655555444443355667777788888888888888888777655 PP

>> PF11917.3  Protein of unknown function (DUF3435)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.3   0.00073      0.59     275     352 ..      21      99 ..      17     101 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00073
   PF11917.3 275 eLtdeqkasveedpelqelkrkreelkkeleakygqvakakgtelyeelekakrevrnerqrlrrel..kkkireeFdee 352
                 eL +  +++ +++ ++q+l  + ++  +  ++++g+  ++k +e +++l+k  +e+rne+ +l+r++   +++ ++F++e
  MMETSP1325-20131115|8172_1  21 ELQESLQEAYQQRDCVQRLAGTLRHKLEVTKKEAGRRGQRKLNE-NSQLMKECNELRNENITLKRKVdhLRQVIKDFEAE 99 
                 33344444445555555555555555555555555555555555.89999999999999999988862245666777665 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.8   0.00035      0.28      24      52 ..      63      91 ..      54     101 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00035
  PF04977.10 24 qeiaalqaelaklkaeneeLeaevkdLks 52
                +e  +l +e ++l++en  L+++v+ L++
  MMETSP1325-20131115|8172_1 63 NENSQLMKECNELRNENITLKRKVDHLRQ 91
                45566677777777777777777777654 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   6.4     0.028        22      22      65 ..      42      89 ..      19     100 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.028
                HHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHH---TTHHHHH CS
   PF06005.7 22 lLqmeieeLkeeneqlk....eeneeLeeenkklkeereawqerlral 65
                +L+ ++e  k+e+        +en++L +e + l++e    +++++ l
  MMETSP1325-20131115|8172_1 42 TLRHKLEVTKKEAGRRGqrklNENSQLMKECNELRNENITLKRKVDHL 89
                678888887776443336778888888888888888888887766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1185  (0.0866735); expected 273.4 (0.02)
Passed bias filter:                      827  (0.0604886); expected 273.4 (0.02)
Passed Vit filter:                       104  (0.00760679); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.53u 0.43s 00:00:00.96 Elapsed: 00:00:00.54
# Mc/sec: 452.65
//
Query:       MMETSP1325-20131115|8173_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-10   40.5   2.2    2.5e-10   40.3   1.5    1.0  1  PF13848.1  Thioredoxin-like domain
     0.0039   15.8   0.1     0.0043   15.7   0.1    1.0  1  PF01216.12 Calsequestrin
  ------ inclusion threshold ------
       0.14   11.3  10.1       0.24   10.6   7.0    1.4  1  PF04886.7  PT repeat


Domain annotation for each model (and alignments):
>> PF13848.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   1.5   5.4e-14   2.5e-10       1      91 [.      43     131 ..      43     132 .] 0.94

  Alignments for each domain:
  == domain 1    score: 40.3 bits;  conditional E-value: 5.4e-14
                 -S-TTSTHHHHHHHHHHH--.--B------HHHHHHTT-----EEEEETTTTEEEEE-HH.T--HHHHHHHHHHH--XXXXXXXXXXXXXXX CS
   PF13848.1   1 fedkddelkeiFekaakelkgdvtfgvtsekevakklgikepkvllfrkfdekrvkydge.kltvddlkkfieknslplvgeltpenaeelf 91 
                 f+d  +++++ F ++a++   d++f +t+++ v ++ +   ++v+lf++fde r +++   ++++d+lk+f++   ++  + +t+en+ ++f
  MMETSP1325-20131115|8173_1  43 FPDLASAEYKVFTEVADSID-DYEFFYTTDSGVIEDAK--ANSVVLFKTFDEGRNDMEVTsSTSADELKTFVTGMAMQKLTIFTQENTKTIF 131
                 89999**************9.*************8555..68**********9999999999**************************9998 PP

>> PF01216.12  Calsequestrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   9.4e-07    0.0043     166     243 ..      36     111 ..      15     127 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 9.4e-07
                 S-EEE---S-TTSHHHHHHHHHHHCTTTTSEEEEE-----CCCCT--TT--EEE-TT-SS-EE-S.SSS--HHHHHHHH CS
  PF01216.12 166 eikligyfksedseyykafedaaeefhpyikffatfdkkvakkltlklneidfyeafmdepitip.dkpnseeeivefv 243
                 ++ + gyf +  s  yk f + a+ ++ y +ff t d++v      k n +  +++f +    +      s +e+  fv
  MMETSP1325-20131115|8173_1  36 DVLVAGYFPDLASAEYKVFTEVADSIDDY-EFFYTTDSGVIED--AKANSVVLFKTFDEGRNDMEvTSSTSADELKTFV 111
                 45578***********************9.788899****986..5889999998887754433312334555666666 PP

>> PF04886.7  PT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   7.0   5.3e-05      0.24       8      19 ..       2      13 ..       1      20 [. 0.59

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 5.3e-05
   PF04886.7  8 eqPTvqPTgqPt 19
                +qPT+qPT+qP+
  MMETSP1325-20131115|8173_1  2 AQPTNQPTNQPP 13
                455555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|8175_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 366.79
//
Query:       MMETSP1325-20131115|8170_1  [L=453]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       759  (0.0555149); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.82u 0.36s 00:00:01.18 Elapsed: 00:00:00.61
# Mc/sec: 1779.59
//
Query:       MMETSP1325-20131115|8178_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-21   74.0   7.8    8.4e-21   74.0   5.4    1.3  1  PF02690.10 Na+/Pi-cotransporter


Domain annotation for each model (and alignments):
>> PF02690.10  Na+/Pi-cotransporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   5.4   6.1e-25   8.4e-21       5      90 ..      60     146 ..      54     148 .] 0.94

  Alignments for each domain:
  == domain 1    score: 74.0 bits;  conditional E-value: 6.1e-25
  PF02690.10   5 gvkllssglkklaggrlkeileklts.npllgllvGalvTalvQSSsattvltvglvaagllslkqalgvilGaniGttitaqlval 90 
                 ++ +l + l+ +++++   +l+k+++ +p++++ vG+++T+lvQSSs+tt+++++l+a+g+++l+q+l+++lGaniGtt t ++++l
  MMETSP1325-20131115|8178_1  60 CMACLVKILSYVTQNSNAAMLQKAAQlDPYIAIGVGTAITILVQSSSITTSVLTPLAASGIITLEQMLPLTLGANIGTTCTGFMASL 146
                 7889999999999999999**9888889********************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       627  (0.0458602); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 771.00
//
Query:       MMETSP1325-20131115|8176_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-16   58.7   0.0    5.1e-16   58.2   0.0    1.1  1  PF03097.13 BRO1-like domain


Domain annotation for each model (and alignments):
>> PF03097.13  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.0   3.7e-20   5.1e-16     131     340 ..       5     244 ..       3     267 .. 0.85

  Alignments for each domain:
  == domain 1    score: 58.2 bits;  conditional E-value: 3.7e-20
  PF03097.13 131 glkaAvkyfqrAagaFeylken.........flhapseDlspetl...kflvklmlAqAqecllekaild.kkkdsliaklaaqvaelYeealealqespvktg..........ip.kewaklvqlKaeyfkAlahyyqalaleekkkyGeaiarLqeAlellkealklakkc.....kskselledlkelkdrikekleeaekdNdfiyheevpdeveltsik.kaalvkalpinells 340
                 + k+A + ++ Aag + yl+++         ++    +D +p  l   k+ ++++lAqAq+    +a+ d k  +sl++kl+  v++  e a++al   p+ ++          ++    + +++++  +fkAla  + a ++  k  yG ai++ q+A+ ll e ++ ++        +   +  dl++l +++ + l+ +  dN+ +y   vp+e+ l+++     ++k++p+ e++ 
  MMETSP1325-20131115|8176_1   5 DAKRASERLRSAAGTLDYLQNKleeggwseaLQCIVGPDTTPVELlgaKAFRDIFLAQAQQFAIAQAVIDgKAPASLLCKLCLGVVHNLEIAVSALRADPAIKYgkitgahgtaNQaCPLTMFLAFQITLFKALANRFAAADAWAKADYGTAIGYQQRAATLLRERADISSPGlpptvGQLGLVDGDLTSLRNEVAQTLKGYLSDNNSVYFSAVPAEDALPPLPkHIVMMKPTPLVEPDI 244
                 5799******************99999777644444447666443333899***********9999999768899**************************99999998888874423467789*****************************************998876668**9999999**************************************9872668999998877764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.49
# Mc/sec: 1697.01
//
Query:       MMETSP1325-20131115|8179_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-10   40.6   0.1    1.7e-10   40.5   0.1    1.0  1  PF00439.20 Bromodomain


Domain annotation for each model (and alignments):
>> PF00439.20  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.1   1.2e-14   1.7e-10      25      72 ..       4      55 .]       1      55 [] 0.93

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 1.2e-14
  PF00439.20 25 eapdYydiikrPidLktIqkklasgkyqs....laqfekdlelvfsNavkyn 72
                 +p Y+++i + ++L++I++k  +++y+     +++f+ d+el+ sNa+k+n
  MMETSP1325-20131115|8179_1  4 GVPTYFEVIDEAMSLNEIKRKFTKHEYSAnehpYDAFKRDVELMLSNAYKFN 55
                5899************************656779*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 231.23
//
Query:       MMETSP1325-20131115|8174_1  [L=295]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-39  134.7   0.0    3.4e-39  134.4   0.0    1.1  1  PF00069.20 Protein kinase domain
    6.5e-16   58.1   0.0    8.5e-16   57.7   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
     0.0021   17.0   0.0     0.0032   16.4   0.0    1.2  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
        0.1   11.7   0.0       0.17   11.0   0.0    1.3  1  PF10707.4  PhoP regulatory network protein YrbL


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.4   0.0   9.9e-43   3.4e-39      82     260 .]       2     201 ..       1     201 [. 0.86

  Alignments for each domain:
  == domain 1    score: 134.4 bits;  conditional E-value: 9.9e-43
                 C-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHH.....TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH...........HHHHHHHHHHT-SSGGGS--........HHHHHTSGGH CS
  PF00069.20  82 ggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvll.....kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks...........eelkdlikkllekdpakRlt........aeeilkhpwl 260
                 ggdl+ +l+k+gk+seee +  a  +l g++++H+++i++rDLKpeNiL+d+ g+++i+D+Gla+       +l+  +gtr YmAPE+l      +++ y++ vD++s+G+++y++l+g+ pf++++ ++  e+ +k+++ + +e ++    ++           + ++dl++ ll+k+pa+Rl          + i++hpw+
  MMETSP1325-20131115|8174_1   2 GGDLNFWLSKKGKFSEEESRYHAIRVLLGIQHMHDHAIVYRDLKPENILMDEAGKTRISDLGLACS---ITPNLKGACGTRGYMAPEMLTrdssgHGRVYDHMVDWFSFGCVVYQFLSGSSPFRSSQAKQWIETRDKTQSLTKKERIDVAVLEMevvfppnkfddAVFEDLCRGLLCKNPANRLGagpagtagGRVIMNHPWF 201
                 689999**********************************************************85...7889***************998999999***************************995555555555555444444444444444899999999999******************9666666666677777776 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.0   2.5e-19   8.5e-16      85     231 ..       2     146 ..       1     155 [. 0.90

  Alignments for each domain:
  == domain 1    score: 57.7 bits;  conditional E-value: 2.5e-19
                 B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE......EEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTSB CS
  PF07714.12  85 gGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk......ftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekcp 231
                 gGdL+  L kk   k++ ++    a+ +  G+++++++ +v rdL   N+L++e  + +isD GLa +i     + + ++a     +mapE+l++ +      + +  D +sfG++++  ++ g+sp+ + ++++ +e+ ++++ l+k+e + 
  MMETSP1325-20131115|8174_1   2 GGDLNFWLSKK--GKFSEEESRYHAIRVLLGIQHMHDHAIVYRDLKPENILMDEAGKTRISDLGLACSI-----TPNLKGACGTRGYMAPEMLTRDSsghgrvYDHMVDWFSFGCVVYQFLS-GSSPFRSSQAKQWIETRDKTQSLTKKERID 146
                 68999999987..99999***************************************************.....445566667788*******9998999999*****************99.99*************999999999888765 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   9.3e-07    0.0032     104     161 ..       4      58 ..       2      70 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 9.3e-07
   PF06293.9 104 dLaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvw 161
                 dL+ +l k  +++ee +r +  +v   i+ mh+  + ++dl + nil+de +   k  
  MMETSP1325-20131115|8174_1   4 DLNFWLSKKGKFSEEESRYHAIRVLLGIQHMHDHAIVYRDLKPENILMDEAG---KTR 58 
                 89999**9888**************************************997...333 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.9e-05      0.17     131     157 ..      31      57 ..      11      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 4.9e-05
   PF10707.4 131 leallenrIvardlkpknivvgrrseg 157
                 ++++ +++Iv+rdlkp+ni++ + +++
  MMETSP1325-20131115|8174_1  31 IQHMHDHAIVYRDLKPENILMDEAGKT 57 
                 58999***************9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1240.22
//
Query:       MMETSP1325-20131115|8180_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          2    8.5   5.7        3.1    7.9   4.0    1.4  1  PF10518.4 TAT (twin-arginine translocation) pathway signal sequence


Domain annotation for each model (and alignments):
>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.0   0.00023       3.1      10      25 ..       5      20 ..       2      25 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00023
   PF10518.4 10 ggaaaaAaaalggala 25
                g++aa+Aa++ gg+l 
  MMETSP1325-20131115|8180_1  5 GAGAAGAAVLIGGGLM 20
                899*********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       500  (0.0365711); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 235.03
//
Query:       MMETSP1325-20131115|8181_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 888.65
//
Query:       MMETSP1325-20131115|8182_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-22   78.7   0.0    4.2e-22   78.4   0.0    1.1  1  PF00069.20 Protein kinase domain
    2.3e-11   43.1   0.0      3e-11   42.8   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
     0.0024   15.8   0.0      0.003   15.5   0.0    1.0  1  PF05804.7  Kinesin-associated protein (KAP)
  ------ inclusion threshold ------
      0.048   12.8   2.9      0.067   12.3   2.0    1.2  1  PF11796.3  Protein of unknown function N-terminus (DUF3323)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4   0.0   1.2e-25   4.2e-22     140     260 .]       1     117 [.       1     117 [. 0.92

  Alignments for each domain:
  == domain 1    score: 78.4 bits;  conditional E-value: 1.2e-25
                 ------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 140 aDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                 +DFG+ +++  +s+ +t++vgt +Ym+PE l  ++ey+ ++DvWslG+ l++ + g+ pf+ e        + ++l+ ++   e+k+ss s+e+ +++  +l  d ++R++ae++l+h++l
  MMETSP1325-20131115|8182_1   1 SDFGITRNMGAQSTACTSFVGTFNYMSPERLT-GEEYSYNSDVWSLGMCLATCILGHCPFQPE---LTFWQLLQKLDLPMAMLESKKSSISPEMHSFVAACLVIDSKQRPQAEQLLNHEFL 117
                 5*******************************.****************************99...6666666777777777777788899***************************986 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.0   8.9e-15     3e-11     145     257 ..       1     113 [.       1     116 [. 0.84

  Alignments for each domain:
  == domain 1    score: 42.8 bits;  conditional E-value: 8.9e-15
                 -----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTS.HHHHHHHHHHTT-BS..---TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  PF07714.12 145 sDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypgl.sneevlellkegkrl..ekpekcpeelyelmkqCweeepeeRptfkelve 257
                 sDfG++r++    + ++ ++    +++m+pE l+ ++++ +sDvWs G++l   +  g+ p++   +  ++l++l+    +  +k++++++e+++++  C+  + ++Rp+ ++l +
  MMETSP1325-20131115|8182_1   1 SDFGITRNM--GAQSTACTSFVGTFNYMSPERLTGEEYSYNSDVWSLGMCLATCIL-GHCPFQPElTFWQLLQKLDLPMAMleSKKSSISPEMHSFVAACLVIDSKQRPQAEQLLN 113
                 7********..5566777888899**************************987665.8888764449999****96655551134566899*******************999875 PP

>> PF05804.7  Kinesin-associated protein (KAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   8.7e-07     0.003      60     135 ..      91     167 ..      74     180 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 8.7e-07
   PF05804.7  60 revvekcklihksklneveqllf..ylknrkd.slqrssarsksssaklkdalpiesptidaeindideyiellyeelv 135
                 +  v  c +i + ++++ eqll   +l++r + s++r  + s+    ++ +a  +  + ++a + +ide + +ly++  
  MMETSP1325-20131115|8182_1  91 HSFVAACLVIDSKQRPQAEQLLNheFLRKRFNwSEERWHKASRA--KATAQAAKYPRKLLEAAVRKIDERLRMLYQDGQ 167
                 567999****************7446888888333444443333..3444555666677899*************8754 PP

>> PF11796.3  Protein of unknown function N-terminus (DUF3323)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.0     2e-05     0.067      69     153 ..     101     178 ..      92     184 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2e-05
   PF11796.3  69 rkaeraeaeaawreaffeeeklaidrpelraWlkrleagetvrrlakqdeeaakallkqvlkaLaaLpadgaekerlavfAarvt 153
                  +++r +ae+   ++f+     +  ++++++W k+ +a+ t +++ak  ++ ++a+++++++ L++L +dg+  ++++++A++v+
  MMETSP1325-20131115|8182_1 101 DSKQRPQAEQLLNHEFLR----KRFNWSEERWHKASRAKAT-AQAAKYPRKLLEAAVRKIDERLRMLYQDGQ--TTRRFLASDVA 178
                 455666666666666666....23489999***********.*************************99985..58999**9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       604  (0.0441779); expected 273.4 (0.02)
Passed bias filter:                      478  (0.034962); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.42s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1065.61
//
Query:       MMETSP1325-20131115|8183_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-09   36.4   0.0    5.2e-09   35.9   0.0    1.2  1  PF08332.5  Calcium/calmodulin dependent protein kinase II Association
    4.1e-09   36.3   0.2    6.5e-09   35.7   0.2    1.3  1  PF13474.1  SnoaL-like domain
  ------ inclusion threshold ------
         10    5.7  10.0         10    5.7   0.2    2.5  2  PF00734.13 Fungal cellulose binding domain


Domain annotation for each model (and alignments):
>> PF08332.5  Calcium/calmodulin dependent protein kinase II Association
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   1.1e-12   5.2e-09       7     128 .]      13     137 ..       7     137 .. 0.83

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 1.1e-12
   PF08332.5   7 kvterlieaiaeg..d.fekytklcdedltvfepealgnlveglefhrfyfekllakkk.kavrttilnkkvqllgddaAviayvrllqlld.keGkkhtvqseetrvwekrdgkWkivhvHrSaap 128
                 ++t ++i+++++g  d  e+ ++l++ d +v+   +++++++     r yf+   + ++ + v  +     ++++gd +Av ++  +++++d ++G++  +  + t+v+++  ++W+i+++H+S +p
  MMETSP1325-20131115|8183_1  13 AATRKWIATVTSGrdDaAEQTAALYASD-AVLWGAVSEEIRANSAAVRQYFDYYASLNElHLVDGSYEAGPIRVFGD-VAVSSGHATFEYIDpESGERVVAPQRHTFVYRRCANGWEIIDHHSSQMP 137
                 5688899988877333245667889999.88888899999999*********6666544156777888899******.**************567999999999********************997 PP

>> PF13474.1  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.2   1.4e-12   6.5e-09       3     119 ..      13     137 ..      11     139 .. 0.80

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 1.4e-12
   PF13474.1   3 alldafyeaaeegD...ldallalfaddvvfigtgadelatgreevraylkpdfaktepisfeledvrv...tvsgdvawvteeldlq.ak.adgseaegqvrgtgvlrktdggWkivhyhlS.vp 119
                 a+ +++++++++g    ++++ al+a d+v  g  ++e   + ++vr+y++ + +  ++++++  ++++   +v gdva+ + + + + ++ + g+   +++r t+v+r+ ++gW+i+ +h+S +p
  MMETSP1325-20131115|8183_1  13 AATRKWIATVTSGRddaAEQTAALYASDAVLWGAVSEEIRANSAAVRQYFDYYAS-LNELHLVDGSYEAgpiRVFGDVAVSSGHATFEyIDpESGERVVAPQRHTFVYRRCANGWEIIDHHSSqMP 137
                 56666776655544123567888999999999****99999**********8776.9999999999999665799******998877634435566669************************544 PP

>> PF00734.13  Fungal cellulose binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.2    0.0023        10       9      17 ..     176     184 ..     175     186 .. 0.90
   2 ?    2.9   3.0     0.017        78       9      19 ..     211     221 ..     210     223 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0023
  PF00734.13   9 gwtGpttCa 17 
                 gwtGp +C+
  MMETSP1325-20131115|8183_1 176 GWTGPNSCS 184
                 8*******7 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.017
  PF00734.13   9 gwtGpttCasG 19 
                 gwtGp +C+ G
  MMETSP1325-20131115|8183_1 211 GWTGPGSCSWG 221
                 8*******977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.46s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 1107.75
//
Query:       MMETSP1325-20131115|8185_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 294.29
//
Query:       MMETSP1325-20131115|8187_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 806.05
//
Query:       MMETSP1325-20131115|8188_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-39  132.9   0.2    1.1e-38  132.8   0.1    1.0  1  PF00857.15 Isochorismatase family


Domain annotation for each model (and alignments):
>> PF00857.15  Isochorismatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   0.1   7.8e-43   1.1e-38       1     173 [.       3     189 ..       3     190 .. 0.98

  Alignments for each domain:
  == domain 1    score: 132.8 bits;  conditional E-value: 7.8e-43
  PF00857.15   1 talvviDmqndfl.......egvleseeieavvenikkllkaarkagipviftrdvhe......leeakgdlekkkasphfepgttgaelvdelaplegdvvvd.KtrysafagtdldeiLkelgiktlvlaGiatdvCVeatardaldlGyevvvvsDAvaalspelhdaalkrlkqafatvitte 173
                 ta+++i +qn+f+       ++v+ +++ ++++e+++ + ++ar+ag +v++   ++        +++ g l   +a+  f+ gt+ a++ ++++p++gdv+v+ K++ +af gtdl+e Lk++gi+t+ laG+ t++CVe+t+r a+++G++vv ++D++aa s+e+++aa +    +f  ++t++
  MMETSP1325-20131115|8188_1   3 TAVICIEFQNEFAseggklyGAVEGVMKSTGMLEKTVYVCDKARAAGAKVFHAPISFAadasdnPNKNLGILAGCNADSLFTAGTWNAQICEAMTPKAGDVMVEgKKGLDAFPGTDLEEKLKANGIETVALAGFLTNCCVESTMRTAYEKGFNVVTLTDCTAATSEEGQTAATEGTYGMFSSPMTAD 189
                 89***********************************************************9999999999**************************************************************************************************************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 903.24
//
Query:       MMETSP1325-20131115|8190_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.41s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 162.77
//
Query:       MMETSP1325-20131115|8191_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.60
# Mc/sec: 1174.21
//
Query:       MMETSP1325-20131115|8192_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 594.10
//
Query:       MMETSP1325-20131115|8189_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-48  164.5   0.0    2.8e-48  164.4   0.0    1.0  1  PF04551.9 GcpE protein
  ------ inclusion threshold ------
      0.096   11.9   0.1       0.16   11.2   0.1    1.3  1  PF08209.6 Sgf11 (transcriptional regulation protein)


Domain annotation for each model (and alignments):
>> PF04551.9  GcpE protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.4   0.0   4.1e-52   2.8e-48     177     358 ..       5     195 ..       1     196 [. 0.88

  Alignments for each domain:
  == domain 1    score: 164.4 bits;  conditional E-value: 4.1e-52
                 EEEEEE---HHHHHHHHHHHHHH--.....--.EEE--TT--------HHHH-----TTT-----EE----SS-HHHHH....HHHHHHHHH--------EEEE--------S-HHHHHHHHHHHT----S--EEEEE---TTT----TTS-E-EE.-----EEEE----EEEEE.-S-HHHHHHHHHHHHH CS
   PF04551.9 177 ivlSlKasnvlvmieayrllaekld.....yp.lHlGvTeaGegeegriksaigigsLLaegiGdTiRvSltedpveEv....kvaleiLqslrlrksktelisCPsCgRtlfdlqevakeiekrlkhlkeglkiavmGCiVNGpGEaadadlGivgsgkgkidlykkkelvkkvikeeeavdelielikek 358
                 ++l lK  ++l  ++a r + + l+     +p +H  v   Ge++e  +   +++g LL +g+Gd + +  ++d +  +    ++++ +Lq +r+r++kte++sCPsCgRtlfdlqev+++i++r+ hl+ g+ ia+mGCiVNGpGE+adad+G+vg+++gk+dly++ke+v++ i++eea+d lielike+
  MMETSP1325-20131115|8189_1   5 VMLLLKPQDALSRLHASRRVFALLKeheidVPvIHWMVCAKGETTEMALEIGAAVGPLLVDGLGDGVMLQNADDATFGLeflrTTSFGLLQGCRMRNTKTEFVSCPSCGRTLFDLQEVTAQISSRTGHLP-GVAIAIMGCIVNGPGEMADADFGYVGGAPGKVDLYVGKEVVRRGIPNEEACDGLIELIKEH 195
                 5566666666666666665544444444556647***************************************99986633445799*******************************************.***********************************************************98 PP

>> PF08209.6  Sgf11 (transcriptional regulation protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   2.3e-05      0.16       1      13 [.     103     115 ..     103     116 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 2.3e-05
   PF08209.6   1 tsayvtCpnCgRq 13 
                 ++++v+Cp CgR+
  MMETSP1325-20131115|8189_1 103 KTEFVSCPSCGRT 115
                 5899********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1111.50
//
Query:       MMETSP1325-20131115|8196_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   14.9   5.8        1.1    8.9   1.0    2.1  2  PF07562.9 Nine Cysteines Domain of family 3 GPCR
       0.17   11.3   8.9       0.78    9.2   0.4    2.6  2  PF07699.8 GCC2 and GCC3
          3    7.5   6.4       0.52    9.9   1.0    2.2  2  PF12662.2 Complement Clr-like EGF-like


Domain annotation for each model (and alignments):
>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1   0.00033       1.5      26      43 ..      24      41 ..      19      46 .. 0.84
   2 ?    8.9   1.0   0.00023       1.1      28      53 ..      49      75 ..      48      76 .. 0.88

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00033
   PF07562.9 26 fdCvpCpegeisnetdet 43
                ++C+pC++g  s++ d+t
  MMETSP1325-20131115|8196_1 24 YNCTPCAAGYASSSWDST 41
                79*****99999977776 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00023
   PF07562.9 28 CvpCpegeisnet.dettCkkCpeeqw 53
                C  C+ ge  n   ++ttC++C ++++
  MMETSP1325-20131115|8196_1 49 CGICAIGESTNGAqGATTCTTCANRTY 75
                899******999889*******98765 PP

>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   2.0    0.0017         8       6      39 ..      21      60 ..      17      65 .. 0.62
   2 ?    9.2   0.4   0.00017      0.78       7      24 ..      63      80 ..      55      81 .] 0.77

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0017
   PF07699.8  6 kgnkkCepCprGtY......kneegqkkCiaCppgttTsk 39
                +g ++C+pC  G+         ++ ++ C  C  g +T +
  MMETSP1325-20131115|8196_1 21 QGWYNCTPCAAGYAssswdsTATTMEDGCGICAIGESTNG 60
                4456899999998744444334445557877777777765 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00017
   PF07699.8  7 gnkkCepCprGtYkneeg 24
                g  +C+ C + tY + eg
  MMETSP1325-20131115|8196_1 63 GATTCTTCANRTYADAEG 80
                4579*********99887 PP

>> PF12662.2  Complement Clr-like EGF-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.0   0.00011      0.52       1      14 [.      23      37 ..      23      53 .. 0.78
   2 ?   -0.4   0.2      0.19   8.6e+02       3      20 ..      66      68 ..      58      71 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00011
   PF12662.2  1 SYtCs.CppGYqlsp 14
                +Y C+ C +GY +s+
  MMETSP1325-20131115|8196_1 23 WYNCTpCAAGYASSS 37
                799*********664 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.19
   PF12662.2  3 tCsCppGYqlspdGrsCv 20
                tC               +
  MMETSP1325-20131115|8196_1 66 TC---------------T 68
                45...............3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 373.28
//
Query:       MMETSP1325-20131115|8198_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 662.52
//
Query:       MMETSP1325-20131115|8197_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 949.83
//
Query:       MMETSP1325-20131115|8195_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0023   17.9   0.0     0.0044   17.0   0.0    1.4  1  PF13676.1 TIR domain


Domain annotation for each model (and alignments):
>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   3.2e-07    0.0044      11      74 ..     106     172 ..      94     203 .. 0.77

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 3.2e-07
   PF13676.1  11 elaealaeaLeragirvfldrdiapgedwaeeiekalrradvvlvllspaylas....dwvrkEleaa 74 
                 + a+ l+e+L ++g++ ++  d++ g++++ ++ ++l++ad+++++ s++y ++    + +++E + +
  MMETSP1325-20131115|8195_1 106 AEAQLLKEELAERGVQMHI-IDVRVGQNITMKVFETLEKADAIIAFGSKDYGEDtgnaASTYHECSFW 172
                 46889**********9988.7999***************************98755554555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.40s 00:00:01.10 Elapsed: 00:00:00.61
# Mc/sec: 1512.45
//
Query:       MMETSP1325-20131115|8199_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 781.42
//
Query:       MMETSP1325-20131115|8203_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00015   21.8   0.1    0.00033   20.7   0.0    1.6  2  PF02373.17 JmjC domain, hydroxylase
  ------ inclusion threshold ------
       0.07   12.5   0.2       0.13   11.6   0.1    1.5  1  PF13621.1  Cupin-like domain
      0.074   13.3   0.0      0.093   12.9   0.0    1.1  1  PF04343.8  Protein of unknown function, DUF488


Domain annotation for each model (and alignments):
>> PF02373.17  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   7.2e-08   0.00033      79     101 ..       2      24 ..       1      35 [. 0.87
   2 ?   -1.2   0.0      0.46   2.1e+03      49      49 ..      68      68 ..      38      83 .. 0.58

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 7.2e-08
                 --EEEEE----EEEE----EEEE CS
  PF02373.17  79 pvyrfvqkpgefVfvfpgayHsv 101
                 + y+fvq+pg++Vf  +g++H++
  MMETSP1325-20131115|8203_1   2 REYSFVQEPGDMVFWCAGWFHQT 24 
                 5699*****************97 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.46
                H CS
  PF02373.17 49 l 49
                +
  MMETSP1325-20131115|8203_1 68 I 68
                1 PP

>> PF13621.1  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.9e-05      0.13     213     232 ..       9      28 ..       2      45 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.9e-05
   PF13621.1 213 epGevLYlPalWfHeVssss 232
                 epG++++  a+WfH+ s ++
  MMETSP1325-20131115|8203_1   9 EPGDMVFWCAGWFHQTSILE 28 
                 79*************88764 PP

>> PF04343.8  Protein of unknown function, DUF488
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     2e-05     0.093      37      86 ..      28      78 ..      19      82 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2e-05
   PF04343.8 37 kedlkeagia.Yvwlkelgpsrelrkwfk.hdp.rweefferYaaeles.keaa 86
                +e+l   +i+ Yv+l +++p+r   + f+ h   ++ + f+++ + le+ + ++
  MMETSP1325-20131115|8203_1 28 EESL---DIHgYVHLNSFAPPRMGITNFPkHRAsEYVQNFSQWIDALEThQTEF 78
                4444...4444******************4555558888888888888855444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|8200_1  [L=565]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-89  298.7   0.2    7.3e-89  297.8   0.2    1.4  1  PF00501.23 AMP-binding enzyme
  ------ inclusion threshold ------
       0.13   12.7   0.0       0.33   11.4   0.0    1.7  1  PF11974.3  Alpha-2-macroglobulin MG1 domain


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  297.8   0.2   1.1e-92   7.3e-89      32     416 ..       2     443 ..       1     445 [. 0.94

  Alignments for each domain:
  == domain 1    score: 297.8 bits;  conditional E-value: 1.1e-92
                 SSSHHHHHHHHHHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHH.HHHHHHHHHCTTCTTECCS-EECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTS........EEEEES-.TTCCHHCTTTHHHHTTT-EEEEESSCCTT-HHHHHHHHHHCT-SEEE--HHHHHHHHHHCHC....................................................CCTTTTT--EEEE-----THHHHHHHHHHTT.SEEEEEE--CGGSSESEECCS-HHH.CCH---EBSTTTEEEEEBSTT-BEE-S----EEEESTTS--B-TT-HHHHHHHBCCSTT...EEE---EEEE-TT--EEEE--GGGEEE-.---EEEHHHHHHHHHTSTTEEEE CS
  PF00501.23  32 pnspewviaflaclkaGavyvplyptlpaerlayilndseakvlitddelltklle.aaskelakekliivrtdkeedsvgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpdd........rvlsllp.lhfdgsilellaplllGatvvlvspedlkdpalllddiekykvtvlalvptvlelllkaiek....................................................kkldlsslrlilsggeplspellerlreafggirivngYGltEttgvvtvslpgdeetkpgsiGrplpgvevkivdeegkevppgevGEllirgpgvakGYlkdpeltaeafdedgw...lyrTGDlgrldedGyleiiGRkkdqiki.rGeniepgeiEsallehpgvaea 416
                  n++ewv++++a   +Gav+vp+y +   ++ +yi +ds+ kvli+ +++  ++ +  + +   +e++i++      d + e  +++ +  + +++++ap + ++p+dla++iyTSGtTG+PKGVml+h+nl+++v++++e+v+  pd         r++ +lp  h  g+++el   l+ Ga   ++ + + +d+ +l+  ie+ k+t+l++vpt+++++++++ +                                                    +++  ++lr+ + +g+p + e++e++  ++  i + +gYGltEt++vv+++ p+++ + +gs+G++lpgv+vk+v + +  vp +++GEl+++gp+v++GY+++pe+tae+++ d+    ++rTGD++ + +  +++i+GR+k+q k+ +G+++ pg+iE+a+  +   a+a
  MMETSP1325-20131115|8200_1   2 RNRLEWVLSAYAGYTIGAVHVPMYEQQQLKDWKYIAEDSGMKVLIAATKDIYDQVKgFEGTVGQVERVICC------DLEEEHPDSFKAHMAIGAANPAPRNYPTPNDLATLIYTSGTTGTPKGVMLSHENLASNVKAVMEHVPPGPDGqpvvtasdRSVAFLPwAHSYGQTCELHSGLAIGASTAIAAGAP-GDAVELMSNIEEVKPTILFSVPTLFKKIYDGVHAkineesglkkslmlkaldtgnqvrlakevgstpgmvtslqhsvldkivlkkiRARFGGNLRMAFAAGAPTPVEVMEFMENLG--ISMTEGYGLTETSPVVSITYPDPTMRILGSVGIALPGVDVKLVMDGEDVVPGEGEGELWVSGPNVMQGYWGKPEETAEVIVYDDDgkrWFRTGDVASIVDGKHIKITGRIKEQYKLeNGKYVVPGPIEEAMCLNRVCAQA 443
                 59*******************************************98777665555055555555555554......456788899999999999999999999*******************************************99***************9999999*********************.9********************************9***************************************************************************9999877..************************************************************************************9*******************************66***********98766555555 PP

>> PF11974.3  Alpha-2-macroglobulin MG1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.8e-05      0.33      12      43 ..     356     397 ..     351     454 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.8e-05
                 ....EEEEEE-SE.....TSEEEE.EEEEES----E......- CS
   PF11974.3  12 rdgllvwVtalst.....GkpvagaeVqlldaregk......l 43 
                 ++++  wV+ +++     Gkp++ aeV ++d ++gk       
  MMETSP1325-20131115|8200_1 356 EGEGELWVSGPNVmqgywGKPEETAEVIVYD-DDGKrwfrtgD 397
                 456699*************************.88875665440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.37s 00:00:01.25 Elapsed: 00:00:00.55
# Mc/sec: 2461.71
//
Query:       MMETSP1325-20131115|8205_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 347.23
//
Query:       MMETSP1325-20131115|8207_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-09   35.9   0.0    4.5e-09   35.5   0.0    1.2  1  PF02401.13 LytB protein


Domain annotation for each model (and alignments):
>> PF02401.13  LytB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   3.3e-13   4.5e-09     220     278 ..       3      81 ..       1      84 [. 0.84

  Alignments for each domain:
  == domain 1    score: 35.5 bits;  conditional E-value: 3.3e-13
                 T-HHHHHHHHHHHH---EEEE-SSGG....................G--HHHHTT-SEE--B----S-HHHHHHHHHHH CS
  PF02401.13 220 nSsNtkrLleiakesgvksylidsae....................eikeewlkavktvgvtaGAStPdkvveevikkl 278
                 +SsNt +Llei + +gv+s++i++a+                       +  l++  +vgvt+GAStPdk v++ ++++
  MMETSP1325-20131115|8207_1   3 DSSNTAHLLEIPQMRGVRSFHINEADcitaeneithrqvdgsiateTFLPVGLDRPLRVGVTSGASTPDKAVQDALSRI 81 
                 69***************************************54442222233444559***************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|8211_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        90  (0.0065828); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|8210_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 506.92
//
Query:       MMETSP1325-20131115|8209_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-14   53.3  33.0      8e-07   28.4   6.2    5.2  5  PF07699.8  GCC2 and GCC3
    2.8e-06   26.8  27.1      0.042   13.4   1.6    4.6  5  PF07562.9  Nine Cysteines Domain of family 3 GPCR
  ------ inclusion threshold ------
       0.31   11.0  29.0        5.1    7.1   1.3    6.3  8  PF00020.13 TNFR/NGFR cysteine-rich region


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   1.4     5e-07    0.0023       1      38 [.      68     106 ..      68     109 .. 0.78
   2 !   13.6   5.2   7.2e-06     0.033      10      36 ..      95     121 ..      88     132 .. 0.85
   3 !    8.8   2.8   0.00022         1       8      35 ..     110     136 ..     105     140 .. 0.85
   4 !   28.4   6.2   1.8e-10     8e-07       1      48 []     135     182 ..     135     182 .. 0.93
   5 !   10.5   0.1   6.7e-05      0.31       1      23 [.     185     207 ..     185     210 .] 0.88

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 5e-07
   PF07699.8   1 GtylkkgnkkCepCprGtY.kneegqk..kCiaCppgttTs 38 
                 Gtyl +g+ +C+ C  G + +n++     +C+ Cp gt+  
  MMETSP1325-20131115|8209_1  68 GTYL-SGD-TCITCDWGKFsQNRYPPFatECTLCPVGTFNT 106
                 9999.555.7*********5466655579*******98755 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 7.2e-06
   PF07699.8  10 kCepCprGtYkneegqkkCiaCppgtt 36 
                 +C++Cp Gt+    g  kC+ C  g++
  MMETSP1325-20131115|8209_1  95 ECTLCPVGTFNTGPGLSKCEDCLEGKF 121
                 8*********************99975 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.00022
   PF07699.8   8 nkkCepCprGtYkneegqkkCiaCppgt 35 
                 ++kCe C +G ++n ++ + C  C +g+
  MMETSP1325-20131115|8209_1 110 LSKCEDCLEGKFSNPSRTN-CADCTAGQ 136
                 579**********998877.99998886 PP

  == domain 4    score: 28.4 bits;  conditional E-value: 1.8e-10
   PF07699.8   1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttT.skkgsksesdC 48 
                 G+y  +g+ +Ce+CprGtY +++ ++kC+ C +g +T  ++gs++ + C
  MMETSP1325-20131115|8209_1 135 GQYVYNGL-TCELCPRGTYAPSALEDKCLDCYAGFYTgRENGSSTCTSC 182
                 88998888.*************************999778999999998 PP

  == domain 5    score: 10.5 bits;  conditional E-value: 6.7e-05
   PF07699.8   1 GtylkkgnkkCepCprGtYknee 23 
                 Gt + k++  C+ C  Gt++ ++
  MMETSP1325-20131115|8209_1 185 GTWSAKNSTSCSTCLAGTFSGSS 207
                 899999*************8765 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.7   0.00059       2.7      27      51 ..      75     102 ..      65     105 .. 0.82
   2 !   10.3   0.6   8.7e-05       0.4      27      53 ..      95     121 ..      92     122 .. 0.93
   3 !   13.4   1.6   9.2e-06     0.042      27      53 ..     112     137 ..     111     138 .. 0.89
   4 !    9.9   0.3   0.00012      0.53      27      51 ..     143     167 ..     142     170 .. 0.90
   5 !   10.9   3.4   5.5e-05      0.25       9      52 ..     164     202 ..     163     204 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00059
   PF07562.9  27 dCvpCpegeisnet...dettCkkCpee 51 
                 +C+ C+ g++s+++    +t+C+ Cp +
  MMETSP1325-20131115|8209_1  75 TCITCDWGKFSQNRyppFATECTLCPVG 102
                 6*********998853346799999976 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 8.7e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C+ Cp g++++  +  +C++C e++ 
  MMETSP1325-20131115|8209_1  95 ECTLCPVGTFNTGPGLSKCEDCLEGKF 121
                 7*********************99976 PP

  == domain 3    score: 13.4 bits;  conditional E-value: 9.2e-06
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqw 53 
                 +C++C eg++sn    t+C +C+ +q+
  MMETSP1325-20131115|8209_1 112 KCEDCLEGKFSN-PSRTNCADCTAGQY 137
                 6***********.5589*****99875 PP

  == domain 4    score: 9.9 bits;  conditional E-value: 0.00012
   PF07562.9  27 dCvpCpegeisnetdettCkkCpee 51 
                 +C+ Cp+g++  +  e++C +C  +
  MMETSP1325-20131115|8209_1 143 TCELCPRGTYAPSALEDKCLDCYAG 167
                 7*********************766 PP

  == domain 5    score: 10.9 bits;  conditional E-value: 5.5e-05
   PF07562.9   9 CkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCpeeq 52 
                 C +G++   ++g++    +C++C+ g+ s  +++t+C +C  ++
  MMETSP1325-20131115|8209_1 164 CYAGFYTGRENGSS----TCTSCDGGTWSA-KNSTSCSTCLAGT 202
                 88888888888888....9**********9.6699*****8876 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.043     2e+02       1      18 [.      65      79 ..      65      88 .. 0.78
   2 ?    5.7   0.3    0.0029        13       1      27 [.      79     105 ..      79     108 .. 0.75
   3 ?    3.7   0.1     0.012        57       1      18 [.      99     116 ..      99     121 .. 0.87
   4 ?    6.3   0.4     0.002         9       1      28 [.     116     139 ..     116     141 .. 0.75
   5 ?    3.0   0.0     0.021        96      17      27 ..     143     153 ..     142     156 .. 0.84
   6 ?    6.3   0.2    0.0019       8.8       1      19 [.     147     165 ..     147     166 .. 0.87
   7 ?    7.1   1.3    0.0011       5.1       1      25 [.     164     186 ..     164     191 .. 0.79
   8 ?    5.6   0.7    0.0033        15       1      26 [.     182     203 ..     182     206 .. 0.81

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.043
                C-TTEEEESSCSEEEEEE CS
  PF00020.13  1 CeegtYtdsknhrqClsC 18
                C  gtY +  + ++C  C
  MMETSP1325-20131115|8209_1 65 CTNGTYLS--G-DTCITC 79
                89999999..6.667555 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0029
                 C-TTEEEESSCS.EEEEEEE-B-TTCEE CS
  PF00020.13   1 CeegtYtdsknh.rqClsCskCepgtvl 27 
                 C  g++++ + + +  ++C++C+ gt+ 
  MMETSP1325-20131115|8209_1  79 CDWGKFSQ-NRYpPFATECTLCPVGTFN 105
                 66677777.666677789*******975 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.012
                 C-TTEEEESSCSEEEEEE CS
  PF00020.13   1 CeegtYtdsknhrqClsC 18 
                 C+ gt++   + ++C++C
  MMETSP1325-20131115|8209_1  99 CPVGTFNTGPGLSKCEDC 116
                 999999999999999888 PP

  == domain 4    score: 6.3 bits;  conditional E-value: 0.002
                 C-TTEEEESSCSEEEEEEE-B-TTCEEE CS
  PF00020.13   1 CeegtYtdsknhrqClsCskCepgtvlv 28 
                 C eg++++ +     ++C  C+ g++++
  MMETSP1325-20131115|8209_1 116 CLEGKFSNPSR----TNCADCTAGQYVY 139
                 89999999655....3468888888875 PP

  == domain 5    score: 3.0 bits;  conditional E-value: 0.021
                 EEE-B-TTCEE CS
  PF00020.13  17 sCskCepgtvl 27 
                  C +C+ gt++
  MMETSP1325-20131115|8209_1 143 TCELCPRGTYA 153
                 59******985 PP

  == domain 6    score: 6.3 bits;  conditional E-value: 0.0019
                 C-TTEEEESSCS.EEEEEEE CS
  PF00020.13   1 CeegtYtdsknh.rqClsCs 19 
                 C+ gtY   ++  ++Cl+C+
  MMETSP1325-20131115|8209_1 147 CPRGTYAP-SALeDKCLDCY 165
                 ********.6666******6 PP

  == domain 7    score: 7.1 bits;  conditional E-value: 0.0011
                 C-TTEEEESSCS.EEEEEEE-B-TTC CS
  PF00020.13   1 CeegtYtdsknh.rqClsCskCepgt 25 
                 C  g+Yt ++n  ++C   ++C+ gt
  MMETSP1325-20131115|8209_1 164 CYAGFYTGRENGsSTC---TSCDGGT 186
                 8899****99985655...8888776 PP

  == domain 8    score: 5.6 bits;  conditional E-value: 0.0033
                 C-TTEEEESSCSEEEEEEE-B-TTCE CS
  PF00020.13   1 CeegtYtdsknhrqClsCskCepgtv 26 
                 C  gt ++ kn +  +sCs+C  gt+
  MMETSP1325-20131115|8209_1 182 CDGGTWSA-KN-S--TSCSTCLAGTF 203
                 99999999.99.5..55799998885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       545  (0.0398625); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.40s 00:00:01.03 Elapsed: 00:00:00.53
# Mc/sec: 949.50
//
Query:       MMETSP1325-20131115|8212_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|8214_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.4   6.9       0.14   11.2   4.8    1.0  1  PF11593.3 Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   4.8     1e-05      0.14     106     185 ..      21     103 ..       6     106 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1e-05
   PF11593.3 106 kekkfqvlEtL....gsyaktgkasasasttkksaksnaattsstanTpaa.asvkkansasaPnatagvGsaattaa.isattat 185
                 k+ +  +lEt     +s a  g+a++s     + + s +a ts +   p+     +++ sa+  +a+a+vGs  ++aa is  +a+
  MMETSP1325-20131115|8214_1  21 KQEQQTILETFggagASTAGGGNATSSS---STASASRGAGTSGSGGAPGGlKASTEKASAGLEKAGAAVGSGVNQAAaISKKAAA 103
                 4445567888843322333334444444...45556666666666666655344445559999************99967766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 545.55
//
Query:       MMETSP1325-20131115|8215_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-17   62.7   0.0    9.6e-17   61.0   0.0    1.7  1  PF08030.7  Ferric reductase NAD binding domain
    1.5e-06   28.5   0.0    1.1e-05   25.8   0.0    2.0  1  PF00175.16 Oxidoreductase NAD-binding domain
  ------ inclusion threshold ------
        0.1   11.4   0.0       0.28    9.9   0.0    1.7  2  PF06406.6  StbA protein


Domain annotation for each model (and alignments):
>> PF08030.7  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   0.0   2.1e-20   9.6e-17       1     142 [.      52     180 ..      52     187 .. 0.87

  Alignments for each domain:
  == domain 1    score: 61.0 bits;  conditional E-value: 2.1e-20
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
   PF08030.7   1 yenvllvagGiGitpfisilkdllkkskkealktkkikliwvvressslewfkdvLneleeeksegnieihiYlTseyeaedasdqlissiegenvdavsgtrfvkihfgRPnlkevlkdi.askhknssvgvfvCGppklvk 142
                 ++++ll+agGiG+tp+ si+++l  ++ k +++  +++++wvv+ +++l  f d L    +e   g+++i+iY+ +++ +e  +   i       +        v+++ gRPn+ e+++++  + +++ +  vfvCGpp+l+ 
  MMETSP1325-20131115|8215_1  52 FDTLLLIAGGIGVTPIHSIFRELRMQMMKGKCSCSRVHMVWVVQRRDDLTPFFDTLADAVNEPLDGRLQISIYVDKDEGCEPGKM--IDH-----H-------GVQVIGGRPNVVEEVNNLtDDVAQGLRPHVFVCGPPGLAA 180
                 799**************************************************9997777777778********99988887744..333.....2.......4899**************5556677799*********986 PP

>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   2.4e-09   1.1e-05       1     107 [.      57     182 ..      57     183 .. 0.76

  Alignments for each domain:
  == domain 1    score: 25.8 bits;  conditional E-value: 2.4e-09
                 EEE-----HHHHHHHHHHHCC..H...CCCEEEEEEEESSGGGST..THHHHHHHHHHSTTEEEEEEC.............TTTTCSSSSBB--HHHHHHHCHHHHHHCTTTEEEEEE-HHHHHHHH CS
  PF00175.16   1 miaGGtGiaplrsvlkalled..e...detkvvlvyGvrteedll..lreeleelakklpgrlkvvav.............srtddgwkggkgyvtdalleelleeeidkeetdvyvCGppgMakav 107
                 +iaGG+G++p+ s+ ++l  +  +      +v++v+ v++++dl   +    +++ + l+grl++  +             +++  +  gg+ +v +++ ++l ++ ++  + +v+vCGppg+a ++
  MMETSP1325-20131115|8215_1  57 LIAGGIGVTPIHSIFRELRMQmmKgkcSCSRVHMVWVVQRRDDLTpfFDTLADAVNEPLDGRLQISIYvdkdegcepgkmiDHHGVQVIGGRPNVVEEV-NNLTDDVAQGLRPHVFVCGPPGLAAMA 182
                 79***************998864377755789**********996547777777777777788776554777777776666666666667777777777.5555578888899*********98765 PP

>> PF06406.6  StbA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   6.2e-05      0.28      86     111 ..      25      50 ..      15      58 .. 0.91
   2 ?   -1.7   0.0      0.21   9.8e+02     201     232 ..      69     100 ..      54     112 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 6.2e-05
                 HHH----SSEEEEEEEE-HHHHB-TT CS
   PF06406.6  86 LlksGlkpqdvdlvvtLPlseyydkn 111
                 L +sGlkpqd+++ v  P +e+ d  
  MMETSP1325-20131115|8215_1  25 LANSGLKPQDIHVNVDGPYGEFVDPA 50 
                 899*******************9965 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.21
                 HHHHHHHHHTT--SB---HHHHHHHHHTTT-H CS
   PF06406.6 201 lvtdavkealetastktsslladeliknRnde 232
                 ++  +++ ++ + + ++s + +  ++++R+d 
  MMETSP1325-20131115|8215_1  69 SIFRELRMQMMKGKCSCSRVHMVWVVQRRDDL 100
                 34445556666667777777777788888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1019.73
//
Query:       MMETSP1325-20131115|8217_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 422.63
//
Query:       MMETSP1325-20131115|8208_1  [L=430]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-51  174.0   1.9    4.3e-51  173.4   1.3    1.3  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.4   1.3   3.2e-55   4.3e-51     197     335 .]       2     133 ..       1     133 [. 0.94

  Alignments for each domain:
  == domain 1    score: 173.4 bits;  conditional E-value: 3.2e-55
                 TSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT.TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
  PF00225.18 197 stklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaenkkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakni 335
                 st++n+eSSRSH+if++ +e  n++++    +++++kl+L+DLAGsEra+ktga + +rl+Ea++INkSL+aL +vIsaL++n  +++vpYR+ kLT+++qdsLggn+ktlm+v++sp++ n +etl +L++a+rak i
  MMETSP1325-20131115|8208_1   2 STAMNAESSRSHSIFSVLVEVYNETTR----KTTTGKLSLIDLAGSERADKTGA-KAERLREAQSINKSLSALCDVISALSTN--ASFVPYRNNKLTQMMQDSLGGNAKTLMFVNISPADYNRDETLGSLEYAARAKLI 133
                 79*******************996543....3579******************6.5677************************..***************************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.36s 00:00:01.10 Elapsed: 00:00:00.65
# Mc/sec: 1585.28
//
Query:       MMETSP1325-20131115|8218_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   13.0   0.1       0.12   12.3   0.1    1.3  1  PF05157.10 Type II secretion system (T2SS), protein E, N-terminal domain


Domain annotation for each model (and alignments):
>> PF05157.10  Type II secretion system (T2SS), protein E, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   8.7e-06      0.12      11      39 ..      22      50 ..       9      57 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.7e-06
  PF05157.10 11 qlleaLaeqlglpfldldqleidpsllql 39
                ++++aL++ +glp+l+ +++e d ++l++
  MMETSP1325-20131115|8218_1 22 DQAQALSREMGLPLLTMADVERDVEALER 50
                59**********************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|8220_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.045   13.6   0.1      0.051   13.4   0.1    1.1  1  PF09029.5  5-aminolevulinate synthase presequence
       0.13   12.1   0.8         18    5.3   0.1    2.7  3  PF04324.10 BFD-like [2Fe-2S] binding domain


Domain annotation for each model (and alignments):
>> PF09029.5  5-aminolevulinate synthase presequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   7.4e-06     0.051       4      44 ..       6      46 ..       3      61 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 7.4e-06
   PF09029.5  4 aatllrrcpvlarvpqtllqkvaks.lltsiercpvmmeglt 44
                +  +  +cp+la+   ++  + + + ++  + +cp++   l 
  MMETSP1325-20131115|8220_1  6 IIEVANTCPMLAQLSVGFCRNLTDAaIIEVAYKCPML-AQLN 46
                4556789**************99986888899***94.4444 PP

>> PF04324.10  BFD-like [2Fe-2S] binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.18   1.2e+03      10      19 ..       2      11 ..       1      20 [. 0.67
   2 ?    4.5   0.0    0.0049        33       5      18 ..      23      36 ..      23      46 .. 0.78
   3 ?    5.3   0.1    0.0027        18       6      19 ..      50      63 ..      49      64 .] 0.90

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.18
  PF04324.10 10 tegeIrdair 19
                t++ I+++ +
  MMETSP1325-20131115|8220_1  2 TDAAIIEVAN 11
                7888999883 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0049
  PF04324.10  5 aCegVtegeIrdai 18
                +C + t++ I+++ 
  MMETSP1325-20131115|8220_1 23 FCRNLTDAAIIEVA 36
                6***********98 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.0027
  PF04324.10  6 CegVtegeIrdair 19
                Ce+ t++ I+++ +
  MMETSP1325-20131115|8220_1 50 CEKLTDAAIIEVAN 63
                ***********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|8222_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 705.84
//
Query:       MMETSP1325-20131115|8224_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 601.64
//
Query:       MMETSP1325-20131115|8221_1  [L=353]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-28   99.3   0.0    1.7e-28   98.8   0.0    1.2  1  PF01764.20 Lipase (class 3)
    0.00038   19.7   0.5     0.0014   17.9   0.3    1.7  1  PF11187.3  Protein of unknown function (DUF2974)
     0.0025   17.6   0.1     0.0051   16.6   0.0    1.5  2  PF12697.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.011   15.4   0.0      0.016   14.8   0.0    1.4  1  PF12695.2  Alpha/beta hydrolase family
      0.024   14.1   0.0      0.033   13.6   0.0    1.2  1  PF07819.8  PGAP1-like protein
       0.17   10.8   0.0       0.31    9.9   0.0    1.4  1  PF06028.6  Alpha/beta hydrolase of unknown function (DUF915)


Domain annotation for each model (and alignments):
>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.8   0.0   7.4e-32   1.7e-28       1     140 [.     153     290 ..     153     292 .. 0.91

  Alignments for each domain:
  == domain 1    score: 98.8 bits;  conditional E-value: 7.4e-32
                 EEEEE-E-SHHHHHHHHHHTECCCTTCGGSTT-EEE---HHHHH.HHHHHHHHHHHHHHHHSTTSEEEEE-------HHHHHHHHHHHT-........TTTEEEEEES-S----HHHHHHHHH------EEEEEETTBSGGG-S-T CS
  PF01764.20   1 vvafRGtetaeewltdldislvevdellekeggkvhkgfleayk.sareqvlkelkrllekypdykivvtGHSLGGalAlLaaadlaenglnk.....sslvtvytfGqPrvgnkefaelveeklkkskvlrvvnenDivprlppa 140
                 +vafRG++++++w+ ++++ +++  +      +kv+ gf++ y+  a+e + + l++  + y + ++v+tGHS GGa A+L+a+d+ +    +      s  +v tfG+Prvgn+efa++   +l    ++rv++  Divp++p  
  MMETSP1325-20131115|8221_1 153 FVAFRGSSNIKNWIDNINAFFTSPYPDA---TVKVEGGFYSEYSdLAKEGLATALAEAKSTYGSSNVVITGHSSGGACATLLAYDIYRGA-DDyaslgLSIRSVTTFGSPRVGNYEFAQASA-AL---PSVRVTHWYDIVPHVPME 290
                 69***************99999888773...8************89999***********************************999955.445888878889*****************99.33...469*************76 PP

>> PF11187.3  Protein of unknown function (DUF2974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.3     6e-07    0.0014      32     105 ..     145     235 ..     139     260 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 6e-07
   PF11187.3  32 feleegtlvvaFRGTddtlvgWkeDfnmafrsevpaqesAak..Ylnkileeseg................kiylgGHSKGGnlAvyaaana 105
                 ++ ++++l+vaFRG  +++  W +++n  f+s+ p     ++  ++ +  +  ++                +++++GHS GG  A+  a+++
  MMETSP1325-20131115|8221_1 145 YDANHESLFVAFRGS-SNIKNWIDNINAFFTSPYPDATVKVEggFYSEYSDLAKEglatalaeakstygssNVVITGHSSGGACATLLAYDI 235
                 6778899*******9.99*************99997665543335555555555568889999999****99*************9877764 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.6   3.6e+03     157     157 ..      62      62 ..      10     121 .. 0.48
   2 !   16.6   0.0   2.2e-06    0.0051      50      99 ..     198     257 ..     162     326 .. 0.64

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.6
                 . CS
   PF12697.2 157 e 157
                 +
  MMETSP1325-20131115|8221_1  62 T 62 
                 2 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 2.2e-06
                 HHHHHHHHHHHHH--.--EEEE--------HHHHH..........H----....EEEEEEE-- CS
   PF12697.2  50 edlaadlaalldalglrpvvlvGHSlGgavalaaa..........arrpd...lvrglvlidp 99 
                 e la +la++  + g   vv+ GHS Gga a+++a          a   +    +r++   ++
  MMETSP1325-20131115|8221_1 198 EGLATALAEAKSTYGSSNVVITGHSSGGACATLLAydiyrgaddyA---SlglSIRSVTTFGS 257
                 45567888888888889******************54433332222...12334444444443 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   7.1e-06     0.016      46      77 ..     200     233 ..     138     306 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 7.1e-06
   PF12695.2  46 akrvlaadll...dleriilvGhSlGGgvalelag 77 
                 ++++l a+++   + +++++ GhS GG+ a++la 
  MMETSP1325-20131115|8221_1 200 LATAL-AEAKstyGSSNVVITGHSSGGACATLLAY 233
                 33334.4444667999*****************98 PP

>> PF07819.8  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.5e-05     0.033      39     105 ..     106     234 ..      72     272 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.5e-05
   PF07819.8  39 e...............................................................ldfftvdfneeltafdgrtledqaeylnqairkilslysssekeptsviliGHSmGGlVArsaltl 105
                 +                                                                +fft  + +  + ++g+  ++ ++  ++ +++ l    +s+   ++v++ GHS GG  A ++++ 
  MMETSP1325-20131115|8221_1 106 SycvdsttswscptcdsgvtltaviedsgvldggralvgydanheslfvafrgssniknwidniNAFFTSPYPDATVKVEGGFYSEYSDLAKEGLATALAEA-KSTYGSSNVVITGHSSGGACATLLAYD 234
                 155555555666666666666666666666666666666666666666666666666666666678999999999999999999999999999999999998.888999*************99877653 PP

>> PF06028.6  Alpha/beta hydrolase of unknown function (DUF915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00014      0.31      83     122 ..     194     233 ..     175     243 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00014
   PF06028.6  83 kkqakwlkkvlseLkkkYnikkvnlvGhSmGglaltsYle 122
                 +   ++l  +l e k++Y+  +v + GhS+Gg  +t  + 
  MMETSP1325-20131115|8221_1 194 DLAKEGLATALAEAKSTYGSSNVVITGHSSGGACATLLAY 233
                 556678999***********************98876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1484.06
//
Query:       MMETSP1325-20131115|8227_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|8226_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3620  (0.264775); expected 273.4 (0.02)
Passed bias filter:                      559  (0.0408865); expected 273.4 (0.02)
Passed Vit filter:                       157  (0.0114833); expected 13.7 (0.001)
Passed Fwd filter:                        60  (0.00438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.85u 0.43s 00:00:02.28 Elapsed: 00:00:00.86
# Mc/sec: 643.67
//
Query:       MMETSP1325-20131115|8228_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 1707.40
//
Query:       MMETSP1325-20131115|8230_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 443.77
//
Query:       MMETSP1325-20131115|8229_1  [L=452]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.42   10.9   2.9       0.89    9.8   2.0    1.5  1  PF13334.1 Domain of unknown function (DUF4094)


Domain annotation for each model (and alignments):
>> PF13334.1  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.0   6.5e-05      0.89      29      92 ..      16      78 ..       5      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 6.5e-05
   PF13334.1 29 skevqlissqeaeeelqlvsedcdkkkkkesdqkdilgeVsktheaiqsLdktIssLemeLAaa 92
                s++ ++i  +++ e++ +v + ++    ke++++  + e +k++   ++  k++s+  meLAaa
  MMETSP1325-20131115|8229_1 16 SEQRAVIRAHRQAEKMASVDQAVELIM-KEDHDEWAITEAKKKRRMAKAKAKRVSQAAMELAAA 78
                4566677889999****9988886666.8888888888******9*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       726  (0.0531012); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.36s 00:00:01.17 Elapsed: 00:00:00.50
# Mc/sec: 2166.31
//
Query:       MMETSP1325-20131115|8232_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-34  119.0   0.3    1.6e-34  118.9   0.2    1.0  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.9   0.2   1.1e-38   1.6e-34     173     353 ..       4     193 ..       1     194 [] 0.93

  Alignments for each domain:
  == domain 1    score: 118.9 bits;  conditional E-value: 1.1e-38
                 HT-TTTSEEEEES-..TTCCHHCTTTHHHHTTT-EEEEESSCCT.T-HHHHHHHHHHCT-SEEE--HHHHHHHHHHCHC..CCTTTTT--EEEE-----THHHHHHHHHHTT...SEEEEEE--CGGSSESEECCS-HHH.CCH---EBSTTTEEEEEBSTT-BEE-S.----EEEES..TTS--B-TT-H CS
  PF00501.23 173 vgltpddrvlsllp..lhfdgsilellaplllGatvvlvspedl.kdpalllddiekykvtvlalvptvlelllkaiek..kkldlsslrlilsggeplspellerlreafg..girivngYGltEttgvvtvslpgdeetkpgsiGrplpgvevkivdeegkevppg.evGEllirg..pgvakGYlkdp 353
                 ++l ++ +++ +++   +++g+ + +++pll+G t v+++  ++ +d ++++d+++++k+t l+++pt++++l++  ++  k++d sslr++ ++gep++pe+++++++ +g  ++ iv++Y++tEt+g+ ++ lpg + +kpg +  p+ g    ++d +g+e++ + ++G l+++   pg ++  ++d+
  MMETSP1325-20131115|8232_1   4 FDLQEG-DIYACVAdcGWITGHSYIIYGPLLNGTTTVMFESTPTyPDHGRYWDMVQRHKITQLYTAPTAIRALMRFGDEkvKEYDRSSLRVLGTVGEPINPEAWQWYYDVVGegRCSIVDTYWQTETGGHLMTPLPGVTPMKPGLCTLPFYGQNPVVLDNDGNELEGNdVEGILCFKTpwPGCMRTLYGDH 193
                 455555.55555555**************************************************************99***********************************************************************************777766266*******9999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 1010.64
//
Query:       MMETSP1325-20131115|8233_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.7   0.6        0.2   11.2   0.4    1.2  1  PF03487.8 Interleukin-13


Domain annotation for each model (and alignments):
>> PF03487.8  Interleukin-13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   1.5e-05       0.2      15      28 ..      13      26 ..       9      29 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.5e-05
                ----X------THH CS
   PF03487.8 15 GGlasPgPVprsta 28
                GGl sP+P p +ta
  MMETSP1325-20131115|8233_1 13 GGLLSPSPLPLATA 26
                9*********9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.50
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|8234_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 807.66
//
Query:       MMETSP1325-20131115|8235_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00084   19.4   0.5     0.0045   17.0   0.3    2.0  1  PF00169.24 PH domain
  ------ inclusion threshold ------
       0.06   13.1   0.0      0.078   12.7   0.0    1.1  1  PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.3   6.6e-07    0.0045      20     101 ..       2      83 ..       1      85 [. 0.81

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 6.6e-07
                 EEEEEET..TEEEEESSSST.TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTT........CEEEEEESSHHHHHHHHHHHHH CS
  PF00169.24  20 ryfvLts..nyLlyfksskk.ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdv........esyllsaeseeerkrWvqalkn 101
                 ry+vL++  ++ +y+ks+ + + +k  ++s++l++ +v  +++            f++    +        +++++ + +e er++Wv+a+  
  MMETSP1325-20131115|8235_1   2 RYVVLHHreTVFVYYKSKADyNANKPQRRSVNLSGYEVLLDPND-----------FRWGLMLKpilaqdtrRQWHFRCATEAEREKWVHAFLA 83 
                 9*****99999999999998788888899999999988887776...........55555555555555889*****************9865 PP

>> PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.1e-05     0.078      33     117 ..       2      81 ..       1      86 [. 0.87

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.1e-05
   PF12814.2  33 RyvwvhpyertllWsskkpksekasekksksvkiesvlsvkdenplpkglekanfnksililtpkralkltaetrerhevWltaL 117
                 Ryv +h  e+  +  ++k    +a++ + +sv ++  +   d n+   gl      k il + ++r+ ++ ++t+ ++e W++a 
  MMETSP1325-20131115|8235_1   2 RYVVLHHRETVFVYYKSKA-DYNANKPQRRSVNLSGYEVLLDPNDFRWGL----MLKPILAQDTRRQWHFRCATEAEREKWVHAF 81 
                 9999999998877777665.44455557899*******************....89**************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.44s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 645.55
//
Query:       MMETSP1325-20131115|8237_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       742  (0.0542715); expected 273.4 (0.02)
Passed bias filter:                      551  (0.0403013); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.49s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1012.34
//
Query:       MMETSP1325-20131115|8240_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.46s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|8241_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.59    9.1   4.3       0.64    8.9   3.0    1.0  1  PF06213.7 Cobalamin biosynthesis protein CobT


Domain annotation for each model (and alignments):
>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.0   4.7e-05      0.64     211     253 ..      17      59 ..       4      71 .. 0.52

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 4.7e-05
   PF06213.7 211 elgdeeessdseekrdedddkedeeddaseeeesgdsdslskd 253
                  ++d++   d++e r++++++e++  + +e+ee+g ++++ ++
  MMETSP1325-20131115|8241_1  17 SSADDSPGGDDDELREDEQEDEEDLGNLGEGEENGTEEAAGNE 59 
                 4445555555555544444444444444555555555544333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.61
# Mc/sec: 318.20
//
Query:       MMETSP1325-20131115|8242_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.60
# Mc/sec: 547.17
//
Query:       MMETSP1325-20131115|8243_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 820.97
//
Query:       MMETSP1325-20131115|8245_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00013   21.6   0.2    0.00035   20.2   0.2    1.6  1  PF04755.7 PAP_fibrillin


Domain annotation for each model (and alignments):
>> PF04755.7  PAP_fibrillin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2   2.6e-08   0.00035     170     197 ..      31      59 ..      12      60 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 2.6e-08
   PF04755.7 170 eakgwLeitYlDedLRIsRGd.eGslfvl 197
                 + + +L++tYlD+ +RIsRG  +G  fv+
  MMETSP1325-20131115|8245_1  31 PSAVQLDTTYLDDRIRISRGAsRGVPFVF 59 
                 45668***************636777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.78
# Mc/sec: 445.48
//
Query:       MMETSP1325-20131115|8244_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-38  132.2   0.0    2.4e-38  131.9   0.0    1.0  1  PF04137.10 Endoplasmic Reticulum Oxidoreductin 1 (ERO1)


Domain annotation for each model (and alignments):
>> PF04137.10  Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.9   0.0   1.7e-42   2.4e-38     110     356 ..      23     271 ..       4     272 .. 0.79

  Alignments for each domain:
  == domain 1    score: 131.9 bits;  conditional E-value: 1.7e-42
                 EEEEETTTS--------------HHHHHHHT----------.....H..HHHHHHHHHH---TTT---HHHHSEE-ST-......--EE--HHHHHHH-...---HHHHHHHHHHHHHHHHHHHHHGGG---S...STTSSSSTTHHHHHHHHHHTT--.......GGGGS.-TT-TTT..S-HHHHHHHHHHHHHHHHHGGG--SHHHHH---TTT---HHHHHHHHHHHTHHH.----BHHHHHHHHHH---HHHHHHHH CS
  PF04137.10 110 avyVdLlknperfTgYkGksaarvWraiYeeNCfkkskkeesseleeeclekrvfyrlisGlhasIsihlaaeylndkt...eelgewepnlelfkerv...gehperleNlYftyalvlrAvaklkpyleelkfnsgneeedketkkkvkdllselks.....ssktfde.nelfkne..eakelkeefrekfrnisrimdCVeCekCrlwGklqtsglgtaLkilfeekekee.ilkLernelvaLintldrlseSieai 356
                  +y d ++npe++T+Y+G+    +W+ i+e+ Cf+k+ + e        l k  f+r +sGlh+sIs+h+ +  ++ ++      g+   ++  +k+r+   g++p+ + NlY+   l+l Av  ++  l ++++ ++      ++ +++++ll++          k +d+ ++  +++  ++     + r + r++ rim+CV+C+ Crl+Gk+   gl +a+ il+ ++ +     +L+r e+ aL+ tl+++++ i+++
  MMETSP1325-20131115|8244_1  23 EDYYDAVSNPEAYTAYDGSL---IWKFIHEKICFQKDLNTE--------LWKLDFNRAVSGLHSSISAHIVEGMVYADEdapAVDGSELDPMAEYKRRLsphGQNPDAIGNLYYGTMLLLCAVREARGRLGAYDYGTDMMGSG-DVGELMEELLESPLLsdsslVAK-IDQaQDNLRDHvaSNPMSLWKARLRTRDLLRIMNCVQCNVCRLHGKVGALGLSVAMSILLGDEGRGGdAGRLHRVEIAALVSTLGKFANAIQIV 271
                 48999*************88...***********6666664........78899*****************987655554574556677889*******66669*****************************8877766544.46666666665543323332222.3331223333333444455567888899*********************************9995444689********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 1412.85
//
Query:       MMETSP1325-20131115|8248_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 415.97
//
Query:       MMETSP1325-20131115|8249_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|8251_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          4    7.5   6.5        8.7    6.4   4.5    1.8  1  PF05696.6 Protein of unknown function (DUF826)


Domain annotation for each model (and alignments):
>> PF05696.6  Protein of unknown function (DUF826)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   4.5   0.00064       8.7      36      78 .]       3      39 ..       2      93 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.00064
   PF05696.6 36 arlDaevDaiLdellGvqaePeteagestaedsqvveatePqP 78
                a  Da vD++L++l  +  +P +     ta  + ++ +t P+P
  MMETSP1325-20131115|8251_1  3 ASADATVDQLLARLRTAAPAPTA-----TAA-PAPAATTAPTP 39
                667***********994444433.....332.23444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.41s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|8247_1  [L=336]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-29  101.2   7.9    3.7e-29  101.2   5.5    2.2  2  PF03151.11 Triose-phosphate Transporter family
    5.7e-09   35.9  22.4    3.3e-05   23.8   3.6    2.3  2  PF00892.15 EamA-like transporter family
    0.00025   19.9  11.9     0.0011   17.8   7.6    2.4  2  PF08449.6  UAA transporter family


Domain annotation for each model (and alignments):
>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   1.0     0.014        65      81     148 ..      99     166 ..      53     168 .. 0.79
   2 !  101.2   5.5     8e-33   3.7e-29       4     152 ..     183     329 ..     180     330 .. 0.93

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.014
  PF03151.11  81 vlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGv 148
                 v  l  +++++ +  ++a+l l+   + +  ++ +   v+  +ls++++++ + +   ++ll  + Gv
  MMETSP1325-20131115|8247_1  99 VKNLTPSALCHLGTHVGAVLSLGAGAVSFTHIVKASEPVVSALLSAVFLKQFLPIPVYISLLPVIGGV 166
                 55677899****************99999*******************99877666666666666665 PP

  == domain 2    score: 101.2 bits;  conditional E-value: 8e-33
  PF03151.11   4 lalaasllfalrlvltqlllrkklkkeskldplelliylspvafivllvvlllvegpklgkesssiksldlssivryvlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGvvlYs 152
                  a+++++++a+r +l++ l++k    +++l+  +l+++l+++af++ll+++l++e p+  k+    +  +  s ++   + ll+gv ++l+n +afl l++v ++t+ v +++krv++i++sv++fg+++t+l + G +ia+lG +lYs
  MMETSP1325-20131115|8247_1 183 TAMMSNVASASRAILSKGLMNKP--IGENLNAPNLYAVLTMIAFAFLLPMSLVIEPPAAIKAAVDGAVASGTSLSSLASISLLSGVYYYLYNEVAFLALSQVAPVTHAVGNTIKRVVIILASVVVFGNQLTPLGATGSAIAILGTLLYS 329
                 69********************8..9********************************766665555544447999************************************************************************8 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   3.6   7.2e-09   3.3e-05       6     125 ..      51     170 ..      49     171 .. 0.84
   2 !   18.0   6.5   4.3e-07     0.002      15     125 ..     203     329 ..     189     330 .. 0.77

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 7.2e-09
  PF00892.15   6 yfvlskkllesvspltitayrlliagi.llilllfllrepialislkdilallllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvllll 125
                 y +++kk+l+ v+  ++ a+  l+agi  +++l+ +  ++ + +++++++ l   +l   + + +    +l  + +s++ ++ + ePv+++lls+++l++ l +  +++++ ++ Gv l +
  MMETSP1325-20131115|8247_1  51 YNIYNKKALNIVDLPWTMALIQLFAGIpYVMFLWATGLRKAPVLTKENVKNLTPSALCH-LGTHVGAVLSLGAGAVSFTHIVKASEPVVSALLSAVFLKQFLPIPVYISLLPVIGGVGLAS 170
                 678899999998866666666666666655555555555569************99996.8899999999***********************************************9876 PP

  == domain 2    score: 18.0 bits;  conditional E-value: 4.3e-07
  PF00892.15  15 es.....vspltitayrlliagi.llilllfllrep............ialislkdilallllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvllll 125
                 ++     +++  + a+  +ia++ ll+  l+ +  p             + +sl++++++ ll+ ++  l++   f al+ + +++ ++ +++  v++il+sv+++g +lt+    g ++++lG+ll +
  MMETSP1325-20131115|8247_1 203 NKpigenLNAPNLYAVLTMIAFAfLLPMSLVIE--PpaaikaavdgavASGTSLSSLASISLLSGVYYYLYNEVAFLALSQVAPVTHAVGNTIKRVVIILASVVVFGNQLTPLGATGSAIAILGTLLYS 329
                 444444477777777777777733333333333..3558999999777777777777777777777777777788888************************************************976 PP

>> PF08449.6  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.09   4.1e+02      69      94 ..      43      68 ..      32      83 .. 0.86
   2 !   17.8   7.6   2.4e-07    0.0011     190     301 ..     218     334 ..      52     336 .] 0.69

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.09
   PF08449.6 69 livalfflssvlnneaLkyisyPtqv 94
                l  al+++ ++ n++aL+ +++P  +
  MMETSP1325-20131115|8247_1 43 LWYALNIGYNIYNKKALNIVDLPWTM 68
                567899999***********999876 PP

  == domain 2    score: 17.8 bits;  conditional E-value: 2.4e-07
   PF08449.6 190 yshllslpfflllllsik.tgelasavsfll....khpsvlfylllnsltqyvgikfvflliaefgaltvtlvttlRKfvslllSvllFgnpltlqqwlGvllVflgillkallkkk 301
                 + +++++ f+l + l+i+    ++ av+ ++    +++s++   ll  +  y+   + fl +++++++t ++  t+ ++v +l Sv++Fgn+lt+   +G ++ +lg+ll++l+k++
  MMETSP1325-20131115|8247_1 218 VLTMIAFAFLLPMSLVIEpPAAIKAAVDGAVasgtSLSSLASISLLSGVYYYLYNEVAFLALSQVAPVTHAVGNTIKRVVIILASVVVFGNQLTPLGATGSAIAILGTLLYSLAKNH 334
                 22333444444444444453334444444435555777777777777788889999999******************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 1519.20
//
Query:       MMETSP1325-20131115|8250_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-37  124.5   2.6    1.1e-36  124.2   1.8    1.1  1  PF01198.14 Ribosomal protein L31e


Domain annotation for each model (and alignments):
>> PF01198.14  Ribosomal protein L31e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.2   1.8     8e-41   1.1e-36       2      83 .]      12      94 ..      11      94 .. 0.98

  Alignments for each domain:
  == domain 1    score: 124.2 bits;  conditional E-value: 8e-41
                EEEE....EE-GGG.GGS-GGGHHHHHHHHHHHHHHHHTTS-GEEE-HHHHHHHH-B---B--SEEEEEEEE-S--...--EE CS
  PF01198.14  2 evvtreytinLrkv.kkvsfkkrAprAvkeirkfaakhmktedvridtklNkaiWsrGiekvPsrvrvrvsrkenededgkek 83
                + vtreyti+L+k+ ++ +fkkrAprA++e++kfa+k+m t+dvr+dtklNka+W+ G+++vP+r+rvr+srk+n+de+++ek
  MMETSP1325-20131115|8250_1 12 DLVTREYTIHLHKLlHGQTFKKRAPRAIREVKKFATKMMFTKDVRVDTKLNKALWATGVRNVPKRIRVRLSRKRNDDEEAEEK 94
                689*****************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 664.44
//
Query:       MMETSP1325-20131115|8252_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00051   20.0   0.0     0.0013   18.8   0.0    1.7  1  PF00536.25 SAM domain (Sterile alpha motif)
     0.0009   18.9   0.0     0.0018   17.9   0.0    1.5  1  PF07647.12 SAM domain (Sterile alpha motif)


Domain annotation for each model (and alignments):
>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   1.9e-07    0.0013       4      62 ..     124     191 ..     121     192 .. 0.81

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 1.9e-07
                 T-SSHHHHHHHT..T-GGGHHHH.HCT--SHHHHTT--HHH.......HHHH-------HHHHHHHHHH CS
  PF00536.25   4 svedVgeWLesi..glgqYvdnF.rageidgdallllteed.......LeklgvtllGHrkkIlssIqr 62 
                 ++ d+g W+ +i   l+q +  F +ag++d   l++l++ed       Le+ g+++  Hrk + ++++ 
  MMETSP1325-20131115|8252_1 124 TPTDIGSWISAIspALAQWAPVFiEAGYDDSVLLAELDAEDldellaaLERKGIKK-PHRKLLEKRLRA 191
                 7899********5566*************************666555555568888.788887777765 PP

>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   2.6e-07    0.0018       5      57 ..     124     183 ..     121     192 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 2.6e-07
                 HHHHHHHHHHHT..--CCSHHHHHHHTS-SCTCCCSSCHHHH.......HCCCHHCHHHHHH CS
  PF07647.12   5 sledvaeWLrsi..glkqYtenFrdqgitggelllrlteedL.......krlGitsvghrkk 57 
                 ++ d+++W ++i   l+q ++ F ++g++   ll++l++edL       +r Gi ++ hr k
  MMETSP1325-20131115|8252_1 124 TPTDIGSWISAIspALAQWAPVFIEAGYDDSVLLAELDAEDLdellaalERKGI-KKPHR-K 183
                 7889******998889**************7777********777777447777.77774.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       460  (0.0336454); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 1045.22
//
Query:       MMETSP1325-20131115|8253_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   13.4   0.1      0.065   13.2   0.0    1.2  1  PF13339.1 Apoptosis antagonizing transcription factor


Domain annotation for each model (and alignments):
>> PF13339.1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   4.7e-06     0.065      48      79 ..      42      85 ..      26     131 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.7e-06
   PF13339.1 48 neelqealksaekalkklldtlleLreaLle............e 79
                 +++++a++s +k++++ll+t+++++e+Ll+             
  MMETSP1325-20131115|8253_1 42 RKKIKQAYTSSCKSYEDLLETVVAIEEELLHistpsrldyfksG 85
                6899**************************76666655444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      411  (0.0300614); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 771.00
//
Query:       MMETSP1325-20131115|8255_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-05   24.1   0.0    1.8e-05   24.0   0.0    1.0  1  PF14305.1  TupA-like ATPgrasp
  ------ inclusion threshold ------
       0.11   12.5   0.0       0.19   11.7   0.0    1.4  1  PF07646.10 Kelch motif


Domain annotation for each model (and alignments):
>> PF14305.1  TupA-like ATPgrasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   2.7e-09   1.8e-05     149     238 ..      13     110 ..       1     111 [. 0.77

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 2.7e-09
   PF14305.1 149 eekknciydldwnklpf....snkyk...dkkkiekps.nleemvelaetLskd.fpfvRvDfy.kvedklyfGElTfypgsgfekffpeewDeelGdyi 238
                 ++    ++ ++w  l++    s   +    +  i+kp+  +   +  ae L+   +++v vD+y +++++++fG +  +p+ g   f+p+++D  lGd++
  MMETSP1325-20131115|8255_1  13 TRTRDLLWARNWTALDVdylsS--TPyihAQGPISKPAcGVTALLDEAEALAGSeLDLVLVDMYvRSNGEIFFGGFNLTPNGGSMRFEPDNYDILLGDLW 110
                 4445568999999999965322..2255788889998745777788899999877*********457889****99999999988*************99 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.8e-05      0.19      16      44 ..      82     121 ..      76     124 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.8e-05
  PF07646.10  16 vvGGa...........htdngllsssdlnvldpeknvWee 44 
                  +GG+           ++dn++  ++dl++ d e+  W++
  MMETSP1325-20131115|8255_1  82 FFGGFnltpnggsmrfEPDNYDILLGDLWIADAESPMWAP 121
                 5788888888888*************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 749.50
//
Query:       MMETSP1325-20131115|8254_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   12.8   0.0       0.12   11.9   0.0    1.4  1  PF13533.1 Biotin-lipoyl like


Domain annotation for each model (and alignments):
>> PF13533.1  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.6e-06      0.12      21      43 ..      76      98 ..      75     100 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.6e-06
   PF13533.1 21 GqeVkkGDvLleldsekleaale 43
                G++V  GD ++e+d+++ +++++
  MMETSP1325-20131115|8254_1 76 GDPVRDGDEIIEIDPTAPNLRVD 98
                9**************99988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 546.99
//
Query:       MMETSP1325-20131115|8256_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 286.71
//
Query:       MMETSP1325-20131115|8258_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1341  (0.0980837); expected 273.4 (0.02)
Passed bias filter:                      535  (0.0391311); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 885.80
//
Query:       MMETSP1325-20131115|8261_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-11   41.6   0.4    2.9e-08   33.0   0.0    2.2  2  PF00023.25 Ankyrin repeat
    3.2e-10   39.7   0.1    4.6e-10   39.2   0.0    1.3  1  PF13857.1  Ankyrin repeats (many copies)
    2.6e-08   33.9   0.0    3.9e-08   33.3   0.0    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
      9e-07   28.4   0.0    7.1e-05   22.5   0.0    2.6  3  PF13606.1  Ankyrin repeat
     0.0097   16.2   0.0      0.033   14.6   0.0    1.8  2  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0017       4.6      21      32 ..       1      12 [.       1      13 [. 0.91
   2 !   33.0   0.0     1e-11   2.9e-08       2      30 ..      15      43 ..      14      46 .. 0.95

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0017
                HHHTTSSTTHBH CS
  PF00023.25 21 LlsqGAdlnaqd 32
                Ll +GAd+n+ d
  MMETSP1325-20131115|8261_1  1 LLRRGADVNLAD 12
                899******988 PP

  == domain 2    score: 33.0 bits;  conditional E-value: 1e-11
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlna 30
                GfTPL+ Aa +g +++v  Ll++GAd+ a
  MMETSP1325-20131115|8261_1 15 GFTPLMDAAWNGEMNMVITLLKHGADPRA 43
                9*************************987 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.0   1.7e-13   4.6e-10       1      45 [.       1      44 [.       1      50 [. 0.94

  Alignments for each domain:
  == domain 1    score: 39.2 bits;  conditional E-value: 1.7e-13
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlr 45
                Ll++g advn  d+gg+tpL+ Aa++g  ++v+ Ll++gad+++ 
  MMETSP1325-20131115|8261_1  1 LLRRG-ADVNLADRGGFTPLMDAAWNGEMNMVITLLKHGADPRAL 44
                89999.***********************************9875 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.0   1.4e-11   3.9e-08      45      86 ..       1      42 [.       1      44 [. 0.95

  Alignments for each domain:
  == domain 1    score: 33.3 bits;  conditional E-value: 1.4e-11
   PF12796.2 45 LleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86
                Ll +gadvn  d  g tpL+ A+ ng+  +v  Ll++gad+ 
  MMETSP1325-20131115|8261_1  1 LLRRGADVNLADRGGFTPLMDAAWNGEMNMVITLLKHGADPR 42
                8999************************************96 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.045   1.2e+02      21      29 ..       1       9 [.       1      10 [. 0.91
   2 !   22.5   0.0   2.6e-08   7.1e-05       2      29 ..      15      42 ..      14      43 .. 0.95
   3 ?   -1.7   0.0       1.7   4.8e+03       3      13 ..      72      82 .]      70      82 .] 0.70

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.045
   PF13606.1 21 Llengadin 29
                Ll++gad+n
  MMETSP1325-20131115|8261_1  1 LLRRGADVN 9 
                89******9 PP

  == domain 2    score: 22.5 bits;  conditional E-value: 2.6e-08
   PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                G TpL+ Aa ng +++v  Ll++gad+ 
  MMETSP1325-20131115|8261_1 15 GFTPLMDAAWNGEMNMVITLLKHGADPR 42
                89************************97 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 1.7
   PF13606.1  3 nTpLhlAasng 13
                +T L + +sng
  MMETSP1325-20131115|8261_1 72 RTTLGVLCSNG 82
                66677788886 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.2e-05     0.033      21      54 .]       2      35 ..       1      35 [. 0.90
   2 ?    2.7   0.0     0.063   1.7e+02      13      30 ..      27      44 ..      22      51 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 1.2e-05
   PF13637.1 21 lekgidinrtdesGntaLhiAalrgnieilklLl 54
                l +g+d+n  d+ G+t+L  Aa++g ++++  Ll
  MMETSP1325-20131115|8261_1  2 LRRGADVNLADRGGFTPLMDAAWNGEMNMVITLL 35
                5579*********************999998886 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.063
   PF13637.1 13 rlelvklLlekgidinrt 30
                 + +v  Ll++g+d+ ++
  MMETSP1325-20131115|8261_1 27 EMNMVITLLKHGADPRAL 44
                5667778999***99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.62
# Mc/sec: 316.94
//
Query:       MMETSP1325-20131115|8263_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   11.0   3.0       0.11   10.9   2.1    1.0  1  PF13148.1 Protein of unknown function (DUF3987)


Domain annotation for each model (and alignments):
>> PF13148.1  Protein of unknown function (DUF3987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.1     8e-06      0.11      62     141 ..       5      84 ..       1      91 [. 0.71

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8e-06
   PF13148.1  62 pleeieeelreeyeeelkeykaekeiweaekkglekkakkaakkgdeeaaae.elleleaeepekP.rrprlivndaTpeal 141
                  lee ++e+re+ +e+ +e+ ++k+ +  + +++e+ ++  ++  ++ea+ + +++ +++++  +P   pr +++  Tp+++
  MMETSP1325-20131115|8263_1   5 SLEEAHSEQREREAEAEAEAAKQKAEYPPRCEAAEEHVAGMKRV-ESEASLKlKARLEARKAL-PPaDGPRVVSTPSTPTGV 84 
                 47888888888888888888888888888888888886655544.456666634444444444.444899**9999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       825  (0.0603423); expected 273.4 (0.02)
Passed bias filter:                      577  (0.042203); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|8260_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-20   70.2   0.0    1.1e-19   70.0   0.0    1.1  1  PF00166.16 Chaperonin 10 Kd subunit
  ------ inclusion threshold ------
      0.096   11.2   0.0       0.12   10.9   0.0    1.1  1  PF11597.3  Mediator complex subunit 13 N-terminal


Domain annotation for each model (and alignments):
>> PF00166.16  Chaperonin 10 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.0   1.6e-23   1.1e-19       2      92 ..      16     108 ..      15     109 .. 0.93

  Alignments for each domain:
  == domain 1    score: 70.0 bits;  conditional E-value: 1.6e-23
  PF00166.16   2 ikplgdrVlveraeeeektkggiilpdsake..kplqGeVvaVGeGarnekgekvpeevkvGdkVllpkysGtkvkvegkeyvvlkekdIlav 92 
                 ++p  dr+lv+ + ++e+t +gi+l+ ++++    ++G+Vv VG+G++ ++ge  p+ +  G+ V + +y+G++v++eg++yv++k +d la+
  MMETSP1325-20131115|8260_1  16 VTPAWDRILVKIQTNDEETTSGIVLAPTSGSsaSASEGQVVKVGKGKVASNGELSPMPIDAGEWVKFREYAGSEVRIEGESYVLVKASDCLAK 108
                 68999*******999**********9555554478******************************************************9997 PP

>> PF11597.3  Mediator complex subunit 13 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.7e-05      0.12     313     373 ..      33      93 ..      22      98 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.7e-05
   PF11597.3 313 lstsavkqtpenssleakqkikqwkanvlkwlsssglspskekelswvevevkegfrssls 373
                   ts +  +p++ s+++  +++  k+  +k++s++ lsp ++++ +wv+++ + g+  + +
  MMETSP1325-20131115|8260_1  33 ETTSGIVLAPTSGSSASASEGQVVKVGKGKVASNGELSPMPIDAGEWVKFREYAGSEVRIE 93 
                 4455555556666666666678899999***********************9888876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 565.95
//
Query:       MMETSP1325-20131115|8264_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-12   47.3   0.5      2e-12   47.0   0.3    1.1  1  PF05024.10 N-acetylglucosaminyl transferase component (Gpi1)


Domain annotation for each model (and alignments):
>> PF05024.10  N-acetylglucosaminyl transferase component (Gpi1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.0   0.3   1.4e-16     2e-12      10     141 ..      31     174 ..      23     177 .] 0.76

  Alignments for each domain:
  == domain 1    score: 47.0 bits;  conditional E-value: 1.4e-16
  PF05024.10  10 liDvalgillll.illenvellvsalvk...vakefvaeelksllkwLlgnPaGlKLNtelaeflg.elflyvielWstfl.dllksli........slllrviaisgllGlsvalalviDliailtlhitvlylyskklynlqlk 141
                 l+D alg l  + +++   +++  a ++   +  +     l + ++wL + PaG+KLN +la+ l+  +fl v +l  +f+ +++k+ +         ++++ ++++g++Gls+ l + +D+++  ++hit+++++ ++l  ++l 
  MMETSP1325-20131115|8264_1  31 LLDHALGTLAAAlVWYRLPSFVRRARHEyapLLAMLGDAALLEQVEWLNSFPAGFKLNVPLARCLSgAIFLLVRDL--NFVgQFFKHGVddatmekvIFVIQLLGLTGVGGLSTLLVVCYDVVRASFFHITLVHAVFSRLLRFELA 174
                 67888887765414555555555555441004455667889999********************963677777777..665356777667778877678899999999*******************************9988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 902.46
//
Query:       MMETSP1325-20131115|8257_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-37  129.5   0.8    1.9e-37  128.6   0.1    1.7  2  PF07724.9  AAA domain (Cdc48 subfamily)
    5.6e-07   29.7   0.1      1e-06   28.8   0.1    1.5  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
    0.00054   19.6   0.3     0.0015   18.3   0.2    1.7  1  PF10431.4  C-terminal, D2-small domain, of ClpB protein


Domain annotation for each model (and alignments):
>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.6   0.1   4.2e-41   1.9e-37      22     171 .]      91     227 ..      77     227 .. 0.90
   2 ?   -2.7   0.0      0.95   4.3e+03      35      57 ..     233     254 ..     229     267 .. 0.68

  Alignments for each domain:
  == domain 1    score: 128.6 bits;  conditional E-value: 4.2e-41
                 HHHHHTT-...........--EEEEGGG-------THHHHHHHHHTTT-HHHHT---EEEETGGG----....------------HHHHHHHH---EE-------EE-TT--EEEE------TTGGGTS-STTTTSGGG--HHHHHH----TTT-----EE CS
   PF07724.9  22 alaellfv.......kkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpk....essgadvSregVqrdLLqileggtltdkqgrkvdtknilfImtgafgsskisdesrskeeeeekkkeevedllkkglipEllgRlpei 171
                 a a +l +       +++k++ +ada+ + ee e+e+l++++ ++++++ ++e +Giv++DEidKi+++    +  +ad S egVqrdLL+++eg+t+++k+g +vdt++ilfI++gaf+++k+sd                       l +El+gRlp++
  MMETSP1325-20131115|8257_1  91 AAAAMLTMmgsgsraTEKKRMKVADARPVVEEMELEKLIDMDDVEKEAIAAVEANGIVFIDEIDKICSSrdfrGMGSADASAEGVQRDLLPLIEGSTINTKYG-NVDTDHILFIASGAFHTAKPSD-----------------------LLAELQGRLPIR 227
                 33444444455666699***************************************************999988999**************************.**********************.......................999999999986 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.95
                 -EEEEGGG-------THHHHHHH CS
   PF07724.9  35 liradaselleeeevehlvsrli 57 
                 l+  d+ ++l+ e v++l+ + +
  MMETSP1325-20131115|8257_1 233 LTETDMYKILT-EPVANLIRQQT 254
                 56677888877.66666666543 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.1   2.2e-10     1e-06      53     128 ..     134     228 ..      85     231 .. 0.71

  Alignments for each domain:
  == domain 1    score: 28.8 bits;  conditional E-value: 2.2e-10
                 HHHTS.....-SEEEEEETGGGC-HHH....SS..TTHCHHHHHHHHHHHHHTTTT.......S.TEEEEEE-SS....GGGS-HHHHHTTSCCEE CS
  PF00004.24  53 akeka.....kpsilfiDEidalaksr....sgseseeeervvnqLlteldgvkkk.......eskvivigatnr....pdkldpallrgRfdrki 128
                 ++++a     +  i+fiDEid++++sr     gs++ ++e v+  Ll+ ++g + +       ++++++i+ +      p++l  +l  gR+ +++
  MMETSP1325-20131115|8257_1 134 VEKEAiaaveANGIVFIDEIDKICSSRdfrgMGSADASAEGVQRDLLPLIEGSTINtkygnvdTDHILFIASGAFhtakPSDLLAELQ-GRLPIRV 228
                 4444466674459****************998999999*****************999999996669999875443223666666666.7777666 PP

>> PF10431.4  C-terminal, D2-small domain, of ClpB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.2   3.2e-07    0.0015       1      45 [.     233     281 ..     233     283 .. 0.92

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3.2e-07
                 --HHHHHHHHHH...HHHHHHHHHHT.TT-EEEE-HHHHHHHHC----T CS
   PF10431.4   1 LskeelkkIvdl...qlkklekrlae.rgveleltdealdalaekgydp 45 
                 L++ ++ kI+++    l ++++ l++ ++vel+++++al ++a+ ++++
  MMETSP1325-20131115|8257_1 233 LTETDMYKILTEpvaNLIRQQTELMKtEEVELQFEPDALLEIARIATEA 281
                 899************99999999988699**************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 1835.51
//
Query:       MMETSP1325-20131115|8259_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-17   63.8  11.2    1.9e-17   63.0   7.8    1.4  1  PF01699.19 Sodium/calcium exchanger protein
  ------ inclusion threshold ------
       0.43   10.1   6.9        1.2    8.6   0.1    2.1  2  PF13903.1  PMP-22/EMP/MP20/Claudin tight junction


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   7.8   2.8e-21   1.9e-17       1     137 [.      70     207 ..      70     209 .. 0.95

  Alignments for each domain:
  == domain 1    score: 63.0 bits;  conditional E-value: 2.8e-21
  PF01699.19   1 llislladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkgagdlalgsivGSalfnlllviglcvlisplgekr.iqkvlvfkvtldfsflllvllllllivllsdgrltvweglvllllyilylv 137
                 ++i ++++++v ++e+i+++lg+++ v+gl++lA+gts+p+l+ss+i+a +g+gd+a+ ++     f++l++++++++++ +++ +  + v+ +++ l++++l+++l+ ++  v+l  +++ + ++ +++++y++ l 
  MMETSP1325-20131115|8259_1  70 AWIGVFSYYMVIWAEIIGATLGIPTVVMGLVFLAAGTSVPDLLSSMIVAQHGQGDMAVXELDRLEYFDVLVGLPFPWILYNIFKNKpVSVVSGETLPLSIGMLMAMLICVIATVALMNWTMYKSMAYAMFAMYAVSLA 207
                 59*******************************************************************************998779999999999999999999999888888889*****************9875 PP

>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.1   0.00018       1.2      63     127 ..      58     122 ..      14     139 .. 0.88
   2 ?    3.5   2.1    0.0069        47      73     117 ..     169     211 ..     144     215 .. 0.67

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00018
   PF13903.1  63 alldltrvvivflllglvlillaavlallaslkksktlllltgvllllagilillavvlyvqkvq 127
                   ++++ +++ ++++g++   + +++ ++++  +  t+++ ++ l + +++  ll +++ +q+ q
  MMETSP1325-20131115|8259_1  58 KGMAWVAFFMSIAWIGVFSYYMVIWAEIIGATLGIPTVVMGLVFLAAGTSVPDLLSSMIVAQHGQ 122
                 5789**************************************99999999999999999999987 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.0069
   PF13903.1  73 vflllglvlillaavlallaslkksktlllltgvllllagilill 117
                 + +l++++ +++a v++   ++ ks    +++  +++++ +++++
  MMETSP1325-20131115|8259_1 169 IGMLMAMLICVIATVALMNWTMYKSM--AYAMFAMYAVSLACLFT 211
                 56777777777777744444444443..45555567777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       875  (0.0639994); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1216.97
//
Query:       MMETSP1325-20131115|8266_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      6e-18   65.0   4.8      1e-13   51.4   0.1    2.1  2  PF09799.4 Predicted membrane protein
  ------ inclusion threshold ------
       0.08   12.7   1.6        6.1    6.7   0.0    2.6  2  PF07125.6 Protein of unknown function (DUF1378)


Domain annotation for each model (and alignments):
>> PF09799.4  Predicted membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.8   2.4e-06     0.017       1      42 [.      13      54 ..      13      64 .. 0.83
   2 !   51.4   0.1   1.5e-17     1e-13      41     109 .]      87     156 ..      81     156 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 2.4e-06
   PF09799.4  1 ilLylnsfysalwfvsellllilKgillklpsaylvlevvll 42
                + +y+n+++s+l+fv++l+ ++ K i+l + s+    ++  l
  MMETSP1325-20131115|8266_1 13 MAIYFNTMFSLLYFVVTLGQILQKLINLEFVSSLNRAMIGEL 54
                789*********************999999887766666555 PP

  == domain 2    score: 51.4 bits;  conditional E-value: 1.5e-17
   PF09799.4  41 llvllllvevvRLylGyrGNlaekvpalalfvvltlliqlpliyflllqtyvlr.lelilsaillallvl 109
                 + v++  +e+ R y+Gy+GNl e+vp++ +f++ tl++qlp+i++l + +++    + i  +++lallvl
  MMETSP1325-20131115|8266_1  87 VFVFWSGAELPRFYFGYVGNLNERVPQMSAFLLTTLFPQLPSILYLTVVQEHKFpFDQIAGYMMLALLVL 156
                 6899**************************************9888765555555************986 PP

>> PF07125.6  Protein of unknown function (DUF1378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.2     0.004        27       6      22 ..      12      28 ..       7      39 .. 0.85
   2 ?    6.7   0.0    0.0009       6.1      17      36 ..     155     173 ..     142     176 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.004
   PF07125.6  6 lllLYFCtvvcvLYLvs 22
                ++ +YF t+ + LY v 
  MMETSP1325-20131115|8266_1 12 QMAIYFNTMFSLLYFVV 28
                7899**********985 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0009
   PF07125.6  17 vLYLvsGGYkviRnyiRrki 36 
                 vL Lv  GY ++R  iRrk 
  MMETSP1325-20131115|8266_1 155 VLELVV-GYNALRALIRRKT 173
                 566664.8**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.53
# Mc/sec: 872.64
//
Query:       MMETSP1325-20131115|8265_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-12   44.2   5.6      0.005   16.6   0.2    3.1  3  PF13516.1  Leucine Rich repeat
    1.8e-07   30.0   0.7       0.15   12.0   0.0    3.2  3  PF00560.28 Leucine Rich Repeat
    6.2e-07   28.7   0.3     0.0013   18.2   0.0    2.6  2  PF12799.2  Leucine Rich repeats (2 copies)
    4.1e-05   23.1   2.6     0.0074   15.9   0.2    2.1  3  PF13855.1  Leucine rich repeat
    9.2e-05   21.9   0.3        3.7    8.0   0.0    3.4  3  PF13504.1  Leucine rich repeat
     0.0086   15.1   0.5         19    4.4   0.0    3.5  3  PF00805.17 Pentapeptide repeats (8 copies)
  ------ inclusion threshold ------
       0.25   10.7   2.8       0.33   10.4   1.4    1.7  2  PF04528.8  Adenovirus early E4 34 kDa protein conserved region
       0.29   10.5   1.4         10    5.5   0.1    2.2  2  PF14443.1  DBC1


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.4e-05     0.024       1      23 [.       8      32 ..       8      33 .. 0.92
   2 !   15.0   0.1   9.8e-06     0.017       1      23 [.      35      58 ..      35      59 .. 0.92
   3 !   16.6   0.2   2.9e-06     0.005       1      24 []      61      84 ..      61      84 .. 0.95

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.4e-05
   PF13516.1  1 lknLtsLdLsnNq..igdeGlsaLa 23
                + nLt++dLs++   ++d  + aLa
  MMETSP1325-20131115|8265_1  8 CANLTTIDLSGCYwlLTDAAVIALA 32
                77***********999999999998 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 9.8e-06
   PF13516.1  1 lknLtsLdLsnN.qigdeGlsaLa 23
                + nLt++dLs++ +++d  + aLa
  MMETSP1325-20131115|8265_1 35 CANLTTIDLSRCiNLTDAAVIALA 58
                77**********88*****99998 PP

  == domain 3    score: 16.6 bits;  conditional E-value: 2.9e-06
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaLan 24
                + nL +++L++++i+d  l aLan
  MMETSP1325-20131115|8265_1 61 CANLVTIHLNGCDITDAALIALAN 84
                77********************97 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0013       2.3       1      11 [.      10      21 ..      10      31 .. 0.85
   2 !   12.0   0.0     9e-05      0.15       1      14 [.      37      51 ..      37      61 .. 0.88
   3 !    7.1   0.1    0.0036       6.1       1      15 [.      63      82 ..      63      89 .] 0.75

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0013
                TESEEEETSS.B CS
  PF00560.28  1 nLeeLdLsgN.n 11
                nL+++dLsg+  
  MMETSP1325-20131115|8265_1 10 NLTTIDLSGCyW 21
                8*********54 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 9e-05
                TESEEEETSS.BCBC CS
  PF00560.28  1 nLeeLdLsgN.nlts 14
                nL+++dLs++ nlt+
  MMETSP1325-20131115|8265_1 37 NLTTIDLSRCiNLTD 51
                8************97 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0036
                TESEEEETSSBCBC.....H CS
  PF00560.28  1 nLeeLdLsgNnlts.....l 15
                nL +++L+g+ +t+     l
  MMETSP1325-20131115|8265_1 63 NLVTIHLNGCDITDaaliaL 82
                899*********98666554 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   1.1e-05     0.019       2      41 ..      10      54 ..       9      59 .. 0.81
   2 !   18.2   0.0   7.3e-07    0.0013       2      43 ..      37      83 ..      36      84 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.1e-05
   PF12799.2  2 nLevLdLsnN..nIkdlppela...nLpnLktLnLsnN.pisdlsa 41
                nL+++dLs++   ++d    +a    + nL+t++Ls++ +++d  +
  MMETSP1325-20131115|8265_1 10 NLTTIDLSGCywLLTDAAV-IAlatHCANLTTIDLSRCiNLTDAAV 54
                9*********6669*9666.443358************99999655 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 7.3e-07
   PF12799.2  2 nLevLdLsnN.nIkdlppela...nLpnLktLnLsnNpisd..lsaLa 43
                nL+++dLs++ n++d    +a    + nL t++L+++ i+d  l aLa
  MMETSP1325-20131115|8265_1 37 NLTTIDLSRCiNLTDAAV-IAlatHCANLVTIHLNGCDITDaaLIALA 83
                9********999**9666.443358***************94455665 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.016        28      24      35 ..       8      19 ..       4      22 .. 0.64
   2 !   15.9   0.2   4.3e-06    0.0074       2      61 .]      10      74 ..       9      74 .. 0.81
   3 !   13.2   0.1     3e-05     0.052       2      41 ..      37      78 ..      36      89 .] 0.86

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.016
   PF13855.1 24 lsnLkvLdLsgn 35
                + nL+++dLsg+
  MMETSP1325-20131115|8265_1  8 CANLTTIDLSGC 19
                556666666644 PP

  == domain 2    score: 15.9 bits;  conditional E-value: 4.3e-06
   PF13855.1  2 nLkeLdLsnN..rlkvipdgaFk.glsnLkvLdLs.gnnlksisp.eafkgLpsLreLnLsgNrl 61
                nL+++dLs++   l++ +  a+  ++ nL+++dLs + nl+      +  ++ +L  + L g+++
  MMETSP1325-20131115|8265_1 10 NLTTIDLSGCywLLTDAAVIALAtHCANLTTIDLSrCINLTDAAViALATHCANLVTIHLNGCDI 74
                899*****997667777887777799*********888888665514578999999999999986 PP

  == domain 3    score: 13.2 bits;  conditional E-value: 3e-05
   PF13855.1  2 nLkeLdLsnN.rlkvipdgaFk.glsnLkvLdLsgnnlksis 41
                nL+++dLs++ +l++ +  a+  ++ nL ++ L+g+ ++   
  MMETSP1325-20131115|8265_1 37 NLTTIDLSRCiNLTDAAVIALAtHCANLVTIHLNGCDITDAA 78
                9********999****99888889***********9999765 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0022       3.7       2      14 ..      10      24 ..       9      28 .. 0.87
   2 ?    5.9   0.0     0.011        18       2      14 ..      37      50 ..      36      55 .. 0.85
   3 ?    4.4   0.0     0.033        56       2      15 ..      63      76 ..      62      82 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0022
   PF13504.1  2 nLkeLdLsgnr..Lt 14
                nL++ dLsg++  Lt
  MMETSP1325-20131115|8265_1 10 NLTTIDLSGCYwlLT 24
                9*********97666 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.011
   PF13504.1  2 nLkeLdLsgn.rLt 14
                nL++ dLs++ +Lt
  MMETSP1325-20131115|8265_1 37 NLTTIDLSRCiNLT 50
                8*********4476 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.033
   PF13504.1  2 nLkeLdLsgnrLts 15
                nL + +L+g+++t+
  MMETSP1325-20131115|8265_1 63 NLVTIHLNGCDITD 76
                788889*****996 PP

>> PF00805.17  Pentapeptide repeats (8 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.011        19      11      20 ..       9      18 ..       7      21 .. 0.45
   2 ?    3.6   0.0      0.02        35      11      21 ..      36      46 ..      34      52 .. 0.64
   3 ?    3.3   0.0     0.025        43      11      26 ..      62      77 ..      60      81 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.011
  PF00805.17 11 AdLrgadLsg 20
                A+L+ +dLsg
  MMETSP1325-20131115|8265_1  9 ANLTTIDLSG 18
                3333333333 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.02
  PF00805.17 11 AdLrgadLsgA 21
                A+L+ +dLs++
  MMETSP1325-20131115|8265_1 36 ANLTTIDLSRC 46
                45555555554 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.025
  PF00805.17 11 AdLrgadLsgAdLtgA 26
                A+L  + L+g+d t A
  MMETSP1325-20131115|8265_1 62 ANLVTIHLNGCDITDA 77
                5666666666666655 PP

>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.4   0.00019      0.33      65     115 ..      15      63 ..       2      78 .. 0.77
   2 ?    2.1   0.1     0.069   1.2e+02      78     101 ..      52      75 ..      49      88 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00019
   PF04528.8  65 sfgevvvlkgllnnlvvlvCksCaelseisvrcCarrtrellrralkllek 115
                 ++  +++l  l++  v+ + ++Ca+l+ i +++C++ t + +  +++ +++
  MMETSP1325-20131115|8265_1  15 DLSGCYWL--LTDAAVIALATHCANLTTIDLSRCINLTDAAVIALATHCAN 63 
                 45555554..3457899999******************9988877777665 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.069
   PF04528.8  78 nlvvlvCksCaelseisvrcCarr 101
                   v+ + ++Ca+l  i+++ C   
  MMETSP1325-20131115|8265_1  52 AAVIALATHCANLVTIHLNGCDIT 75 
                 678889999********9999655 PP

>> PF14443.1  DBC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.014        23      49      62 ..       7      20 ..       2      25 .. 0.80
   2 ?    5.5   0.1     0.006        10      49      62 ..      34      47 ..      24      60 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.014
   PF14443.1 49 ttkaltgiDLSsct 62
                ++ +lt iDLS c 
  MMETSP1325-20131115|8265_1  7 HCANLTTIDLSGCY 20
                46789********5 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.006
   PF14443.1 49 ttkaltgiDLSsct 62
                ++ +lt iDLS+c 
  MMETSP1325-20131115|8265_1 34 HCANLTTIDLSRCI 47
                67899********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 473.95
//
Query:       MMETSP1325-20131115|8269_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 324.21
//
Query:       MMETSP1325-20131115|8268_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 457.49
//
Query:       MMETSP1325-20131115|8271_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-21   75.0   0.0    7.4e-21   74.9   0.0    1.0  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.17   11.8   0.0    1.2  1  PF11699.3  Mif2/CENP-C like


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   1.1e-24   7.4e-21      33     163 ..       1     130 [.       1     133 [] 0.92

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 1.1e-24
                 HHHHHHHHHHHS.S---B-HHHHHHH-TTTS-.....TT----HHHHHHHHHHC---BBTTTS---SSC-.S--CCCC--C.CCCECEEEEEESS.-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-T CS
  PF00112.18  33 galegrlaiktkkklvslSeqelvdCskeene.....gCnGGlmenafeyikknggivtekdypYkakeggkCkkkkkkekevakikgygkvken.seealkkalakngPvsvaidaseedfqlYksGvyketecss 163
                 ga+e++l +++ ++++ lSeq  vdC  + ++     gC+G ++   fey+++ +g v e+dy Y+a++  +Ck+  k+   va+i+gy+ ++en s e++++ l+++gP++v++das++  ++Y++Gv++ ++c s
  MMETSP1325-20131115|8271_1   1 GAIESALLMNN-QTQTILSEQLYVDCAPNPDScggtgGCSGSIQPLLFEYAMS-EGAVLEDDYAYTAST-DTCKAALKT--PVATIEGYEVLPENlSPEDMMQYLVTKGPLAVSVDASKW--SFYSGGVFSYEQCGS 130
                 58999999999.79************98555578999***************9.9************99.7****9765..469***********999*********************5..9********999986 PP

>> PF11699.3  Mif2/CENP-C like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.4e-05      0.17      28      61 ..      90     123 ..      68     126 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.4e-05
                 EE--SEEEEEEEEE--EEEEETTEEEEE----EE CS
   PF11699.3  28 knskkatlvFfVikGrvevtvnetsFvigkgsvf 61 
                 + s ++++ + V+kG + v+v   +++  +g+vf
  MMETSP1325-20131115|8271_1  90 NLSPEDMMQYLVTKGPLAVSVDASKWSFYSGGVF 123
                 5678899*************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 692.86
//
Query:       MMETSP1325-20131115|8272_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   11.7   0.1       0.16   11.5   0.1    1.2  1  PF08294.6 TIM21


Domain annotation for each model (and alignments):
>> PF08294.6  TIM21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   1.2e-05      0.16      41      72 ..       2      33 ..       1      44 [. 0.93

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.2e-05
   PF08294.6 41 kifnrAlekveedeevrsvlgerlkayGeetr 72
                k+f+rA++++ +d++  +++ er ka+ +e +
  MMETSP1325-20131115|8272_1  2 KVFDRAVATCGKDKKEAKAFAERSKAHADEAK 33
                68*************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       771  (0.0563926); expected 273.4 (0.02)
Passed bias filter:                      639  (0.0467379); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|8273_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 557.61
//
Query:       MMETSP1325-20131115|8270_1  [L=354]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.5e-112  374.7   0.3     3e-112  374.5   0.2    1.0  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  374.5   0.2  2.2e-116    3e-112      24     335 .]      23     326 ..       2     326 .. 0.93

  Alignments for each domain:
  == domain 1    score: 374.5 bits;  conditional E-value: 2.2e-116
                 EEEEEEEECCTTTCCTEEEEEESEEEETTS-HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-.TTTTC---HHHHHHHHHHHHHCCTTTHTEEEEEEEEEEEEETTEEEETTSTTTTS-SS.BEEEECTTTCCEEECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT..TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
  PF00225.18  24 kkeeekkskkenkeekekeftFdkvfdeeatqeevyeelakplvesvleGynvtifaYGqtgsGKTytmeGkeeeeekGiipraleelFeeieeekeekekefsvkvsylEiYnekiyDLLesekekkkkklkiredskkgkvyvkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaen.kkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakni 335
                 +k +++ +  ++++++ek+++Fd+vfd +++q  vy++++k l++ vl+ +n+t+faYGqtg+GKTytm G    + +Gi++++l++lF++ + +++++  +++v+vs+lE+Yne+i+DLL++     ++ l++red+ +g ++v+g+tevev+sa+e+++ll++g++nr+ + t++ne SSRSHa++++ +e++++++ t   ++k++kl+LvDLAGsEra++t++  + rlkE+anIN+SLlaLg++I+aL e+ +k ++vpYRdSkLTrlL+dsLggn++t+mi+++s s  ++eetl+tL++a+rakni
  MMETSP1325-20131115|8270_1  23 SKVKDEVDVLRQHRSREKRYAFDHVFDAKDDQTVVYNNTTKFLIQGVLDCFNATVFAYGQTGAGKTYTMIGA--PSAPGIMVLTLQDLFQSSRATSKSSGVKYKVTVSFLEVYNENIRDLLSDV----EEYLDLREDPIRG-PVVTGITEVEVESATEIMDLLDRGNRNRTQHPTAANEVSSRSHAVLQVLVENRERAEGTM-AKIKIGKLSLVDLAGSERAADTKNR-GARLKEGANINRSLLALGNCINALGEKgNKGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISSSVGSFEETLNTLKYANRAKNI 326
                 566667777889999********************************************************6..677*****************999999**********************75....456********98.*****************************************************9876555.7899*******************76.666************************8999***************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.52
# Mc/sec: 1631.37
//
Query:       MMETSP1325-20131115|8274_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          5    7.6  32.7       0.56   10.6  15.7    2.1  2  PF12871.2 Pre-mRNA-splicing factor 38-associated hydrophilic C-term


Domain annotation for each model (and alignments):
>> PF12871.2  Pre-mRNA-splicing factor 38-associated hydrophilic C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6  15.7   4.1e-05      0.56      60      96 ..       6      40 ..       2      41 .. 0.65
   2 ?    3.0   1.6    0.0097   1.3e+02      59      86 ..      52      79 .]      45      79 .] 0.68

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 4.1e-05
   PF12871.2 60 rerdrdrrrdrsrddrdrdrkerdrdrsrsrsrdrrr 96
                r++++++  + +  ++drdr +rdrdr+r+r+rd++r
  MMETSP1325-20131115|8274_1  6 RNASSSSMGSNDG-RSDRDR-DRDRDRDRDRDRDDYR 40
                4444444444444.577888.7888888888888887 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.0097
   PF12871.2 59 krerdrdrrrdrsrddrdrdrkerdrdr 86
                +r    ++r  r++ + dr+r+  drdr
  MMETSP1325-20131115|8274_1 52 ERPGGPPERPKRDDFPTDRERGPFDRDR 79
                4555556666777778888888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 371.20
//
Query:       MMETSP1325-20131115|8275_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       82  (0.00599766); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|8276_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 403.83
//
Query:       MMETSP1325-20131115|8277_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-12   45.7   0.1    3.8e-12   45.5   0.0    1.1  1  PF02201.13 SWIB/MDM2 domain


Domain annotation for each model (and alignments):
>> PF02201.13  SWIB/MDM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.0   2.8e-16   3.8e-12      19      76 .]       5      63 ..       1      63 [. 0.92

  Alignments for each domain:
  == domain 1    score: 45.5 bits;  conditional E-value: 2.8e-16
                CE-HHHHHHHHHHHHHHCT-.B-SSSTTEEE-TSHHHHH---.EEETTCTHHHHHHHCC CS
  PF02201.13 19 elsrtevvkklwqYIkeknL.qDpknkkeilCDekLkklfggdrvkmfeikkllskhli 76
                +l+r+ev+k++ +YIkek+L +   +k++ +CD++L++l+g ++v+   +++l++++++
  MMETSP1325-20131115|8277_1  5 TLTRQEVMKRMSAYIKEKELpKSTVDKRKYVCDDALQELLGVKSVNIIAMNNLRRPFFL 63
                48******************56778*****************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       507  (0.0370831); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 388.21
//
Query:       MMETSP1325-20131115|8280_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 265.31
//
Query:       MMETSP1325-20131115|8279_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 878.66
//
Query:       MMETSP1325-20131115|8278_1  [L=276]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 1437.81
//
Query:       MMETSP1325-20131115|8283_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   13.6   0.1      0.062   13.3   0.1    1.1  1  PF03750.8 Protein of unknown function (DUF310)


Domain annotation for each model (and alignments):
>> PF03750.8  Protein of unknown function (DUF310)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   4.6e-06     0.062      21      57 ..      30      67 ..      19      74 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.6e-06
   PF03750.8 21 gkelarkklktsqiRklfeevrsiekkkdsrdee.ikk 57
                ++el+r ++++ q+R +f+++ + e+k+++  +e +k+
  MMETSP1325-20131115|8283_1 30 SSELKRRRIEAEQLRMVFDQMVAAEAKDKKAMDEkWKE 67
                589****************9999888877655543665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       717  (0.0524429); expected 273.4 (0.02)
Passed bias filter:                      522  (0.0381802); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.44s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 384.32
//
Query:       MMETSP1325-20131115|8285_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.31s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 407.89
//
Query:       MMETSP1325-20131115|8284_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-26   90.5  33.0    8.4e-08   31.3   0.7    5.7  6  PF02493.15 MORN repeat
  ------ inclusion threshold ------
       0.01   15.4   0.0       0.46   10.1   0.0    2.3  2  PF12690.2  Intracellular proteinase inhibitor


Domain annotation for each model (and alignments):
>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.37   2.5e+03      11      21 ..       3      13 ..       2      14 .. 0.69
   2 !   21.8   0.2   1.3e-08   8.9e-05       1      22 [.      15      36 ..      15      37 .. 0.94
   3 !   26.3   0.5     5e-10   3.4e-06       1      21 [.      38      58 ..      38      60 .. 0.95
   4 !   31.3   0.7   1.2e-11   8.4e-08       1      22 [.      61      82 ..      61      83 .. 0.96
   5 !   24.4   3.2     2e-09   1.4e-05       1      22 [.      84     105 ..      84     106 .. 0.97
   6 !    5.8   0.0    0.0016        11       3      10 ..     109     116 ..     108     117 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.37
                E-EEEB----- CS
  PF02493.15 11 hGkGvytwpdG 21
                +G+G + +  G
  MMETSP1325-20131115|8284_1  3 EGQGSMKSRGG 13
                68888876655 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 1.3e-08
                EE-EEETTEEE-EEEB------ CS
  PF02493.15  1 YeGeWknGkrhGkGvytwpdGd 22
                Y G + +G +hG+G++++ +G 
  MMETSP1325-20131115|8284_1 15 YNGSFAKGAKHGHGKMQFNSGA 36
                89******************96 PP

  == domain 3    score: 26.3 bits;  conditional E-value: 5e-10
                EE-EEETTEEE-EEEB----- CS
  PF02493.15  1 YeGeWknGkrhGkGvytwpdG 21
                Y+GeW ++++ G G+y+wpd 
  MMETSP1325-20131115|8284_1 38 YDGEWEGNRMAGEGTYIWPDN 58
                9******************96 PP

  == domain 4    score: 31.3 bits;  conditional E-value: 1.2e-11
                EE-EEETTEEE-EEEB------ CS
  PF02493.15  1 YeGeWknGkrhGkGvytwpdGd 22
                Y+GeW+nG+rhG G + wp+G 
  MMETSP1325-20131115|8284_1 61 YDGEWQNGLRHGLGAMMWPNGQ 82
                9********************6 PP

  == domain 5    score: 24.4 bits;  conditional E-value: 2e-09
                 EE-EEETTEEE-EEEB------ CS
  PF02493.15   1 YeGeWknGkrhGkGvytwpdGd 22 
                 Y+G Wk Gk++G Gv +w++G+
  MMETSP1325-20131115|8284_1  84 YDGGWKAGKMDGEGVWRWSNGT 105
                 9********************8 PP

  == domain 6    score: 5.8 bits;  conditional E-value: 0.0016
                 -EEETTEE CS
  PF02493.15   3 GeWknGkr 10 
                 GeW+n+kr
  MMETSP1325-20131115|8284_1 109 GEWVNDKR 116
                 9******9 PP

>> PF12690.2  Intracellular proteinase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.011        75      17      27 ..      29      39 ..      24      62 .. 0.81
   2 ?   10.1   0.0   6.7e-05      0.46      18      44 ..      76     104 ..      74     106 .. 0.84

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.011
   PF12690.2 17 tleFssgqryD 27
                +++F+sg +yD
  MMETSP1325-20131115|8284_1 29 KMQFNSGATYD 39
                58999999998 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 6.7e-05
   PF12690.2  18 leFssgqryDlvik..dkdgeevwrySeg 44 
                 ++++ gq+yD   k    dge vwr+S+g
  MMETSP1325-20131115|8284_1  76 MMWPNGQKYDGGWKagKMDGEGVWRWSNG 104
                 67899*****76665589*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 798.79
//
Query:       MMETSP1325-20131115|8286_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 181.95
//
Query:       MMETSP1325-20131115|8288_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-08   31.9   0.0    4.7e-08   31.8   0.0    1.0  1  PF00982.16 Glycosyltransferase family 20


Domain annotation for each model (and alignments):
>> PF00982.16  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   3.4e-12   4.7e-08     300     353 ..       2      55 ..       1      56 [] 0.97

  Alignments for each domain:
  == domain 1    score: 31.8 bits;  conditional E-value: 3.4e-12
                 HHHHH-GGG---EEEEEE--B-----HHHHHHHHHHHHH--------------S CS
  PF00982.16 300 rfLeeypelrgkvvlvqiavpsredveeyqeleseveelvgrINgefgtldytP 353
                 r+L eyp + ++ vl q++    ++ e+ +  ++e+ elv+rIN++ g++++ P
  MMETSP1325-20131115|8288_1   2 RLLDEYPTWANQLVLYQTCFRPNNRPEDEEVTSKEIAELVKRINDKHGSDEFGP 55 
                 79*************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       484  (0.0354008); expected 273.4 (0.02)
Passed bias filter:                      476  (0.0348157); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|8289_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   14.9   0.0       0.03   13.9   0.0    1.5  1  PF09130.6 Domain of unknown function (DUF1932)


Domain annotation for each model (and alignments):
>> PF09130.6  Domain of unknown function (DUF1932)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.2e-06      0.03       9      41 ..      66      99 ..      63     100 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.2e-06
   PF09130.6  9 elldslsesfpgldw.ekaeylvermaphAyRrv 41
                 +++s+++ +++++  +++++ +e+m+ +AyR+v
  MMETSP1325-20131115|8289_1 66 IFMSSMDDAEKAALAsKRVANIIETMTYKAYRYV 99
                57899********99*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       613  (0.0448362); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 673.02
//
Query:       MMETSP1325-20131115|8291_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-05   21.6   0.0    9.6e-05   21.5   0.0    1.0  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0     7e-09   9.6e-05       4      58 ..       9      61 ..       6      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 7e-09
                EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-T CS
  PF00069.20  4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHp 58
                le +G+Gs+G Vy +++  tgk  A+K ++  e+ +++    ++El +l++ +++
  MMETSP1325-20131115|8291_1  9 LELIGRGSSGAVYLGIDVVTGKLAAIKSVSLLETGNRAM--LRHELDVLRNQRSQ 61
                689***************************999988764..55699999987755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 326.78
//
Query:       MMETSP1325-20131115|8293_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.002   17.4   1.3      0.002   17.4   0.9    1.4  2  PF01529.15 DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1       0.5   6.9e+03      59      65 ..       3       9 ..       2      11 .. 0.74
   2 !   17.4   0.9   1.5e-07     0.002      67      81 ..      52      66 ..      37      67 .] 0.93

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 0.5
  PF01529.15 59 pprshHC 65
                p  + HC
  MMETSP1325-20131115|8293_1  3 PTTASHC 9 
                7778898 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 1.5e-07
  PF01529.15 67 iCnkCvlkfDhHCpw 81
                +C+ C+ + DhHCpw
  MMETSP1325-20131115|8293_1 52 QCKLCIEGLDHHCPW 66
                7************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|8290_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.56
# Mc/sec: 618.01
//
Query:       MMETSP1325-20131115|8292_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 1073.37
//
Query:       MMETSP1325-20131115|8295_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.28    9.9  10.6       0.29    9.9   7.4    1.0  1  PF14362.1  Domain of unknown function (DUF4407)
        0.6    9.5   7.2       0.62    9.5   5.0    1.1  1  PF00769.14 Ezrin/radixin/moesin family
        2.6    7.8   4.5        2.7    7.7   3.1    1.1  1  PF06679.7  Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   7.4   6.3e-05      0.29     145     216 ..       4      74 ..       1      77 [] 0.90

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 6.3e-05
   PF14362.1 145 aalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaeleank 216
                 ++++++l+e +ae +aa ee+++e+  t +++ +G  pv +++    d+aq+  ++ +a+ ++a a++ +nk
  MMETSP1325-20131115|8295_1   4 EKARQQLEEEEAEAKAAAEERKKEAVAT-SSKAPGPAPVPTNAAGGADQAQNVADSGNAASEHAAATVLQNK 74 
                 6899**********************86.*******************************999998887443 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.0   0.00014      0.62     101     160 ..       3      63 ..       1      77 [] 0.64

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00014
  PF00769.14 101 keaeteqlqkelreareaeeeakeellevlaaptaps.aavsep....enseklvqgdngeeask 160
                  e+  +ql++e +ea++a ee k+e+  v+++++ap  a+v+++    + + ++v++ +g++a  
  MMETSP1325-20131115|8295_1   3 TEKARQQLEEEEAEAKAAAEERKKEA--VATSSKAPGpAPVPTNaaggADQAQNVAD-SGNAA-S 63 
                 57778899999999999888888875..999999999999*9997765333333322.22222.2 PP

>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.1   0.00059       2.7      29      82 ..      16      69 ..       7      77 .] 0.43

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00059
   PF06679.7 29 llseaesaassePeprtlsalpPgptpa..nptalleadakkGkasetssggalav 82
                 ++ a++    + e+  +s+ +Pgp+p   n+++    +++  + ++++s  a a+
  MMETSP1325-20131115|8295_1 16 EAKAAAEER--KKEAVATSSKAPGPAPVptNAAGGADQAQNVADSGNAASEHAAAT 69
                333333333..444444555555554431155544443333333333333333334 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1227  (0.0897455); expected 273.4 (0.02)
Passed bias filter:                      821  (0.0600497); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.47s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|8296_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 534.19
//
Query:       MMETSP1325-20131115|8294_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1391.73
//
Query:       MMETSP1325-20131115|8298_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-05   22.2   0.1    7.4e-05   21.9   0.0    1.1  1  PF00069.20 Protein kinase domain
  ------ inclusion threshold ------
      0.024   13.6   0.1      0.029   13.3   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   1.1e-08   7.4e-05       1      36 [.      60      98 ..      60     101 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1.1e-08
                EEEEEEEE----EEEEEEEETTCCE...EEEEEEEEGGG CS
  PF00069.20  1 yelleklGsGsfGkVykakkkktgk...kvAvKilkkee 36
                +el++ lG+GsfGkV+ ++kk++gk    +A+K+l+k+e
  MMETSP1325-20131115|8298_1 60 FELIKVLGKGSFGKVMLCRKKDEGKsgpLYAMKTLRKKE 98
                57899********************9999******9986 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.3e-06     0.029       2      39 ..      61      97 ..      60     101 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.3e-06
                EEEEEE-------EEEEEEETTTTSSEEEEEEEEECTT CS
  PF07714.12  2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkes 39
                el k lG+G+fGkV+ ++ k ++ k+    a+Ktl+++
  MMETSP1325-20131115|8298_1 61 ELIKVLGKGSFGKVMLCRKK-DEGKSGPLYAMKTLRKK 97
                6889**************99.77777888899999664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 520.06
//
Query:       MMETSP1325-20131115|8297_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-35  121.1   0.0    4.5e-35  120.7   0.0    1.1  1  PF00551.14 Formyl transferase
    1.1e-16   60.6   1.6    2.2e-16   59.7   1.1    1.5  1  PF00586.19 AIR synthase related protein, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00551.14  Formyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.7   0.0   6.6e-39   4.5e-35      64     181 .]       5     125 ..       2     125 .. 0.96

  Alignments for each domain:
  == domain 1    score: 120.7 bits;  conditional E-value: 6.6e-39
                 HHHCHHHHHHHHHCG--SEEEES---S---HHHHCCT---EEEEESS-TTTTB-...--HHHHHHH----EE-EEEEE--SS----EEEEEEEEE--TT--HHHHHHHCCCCHHHHHHHHH CS
  PF00551.14  64 rsqseselakslaelkadlivlagygkllpkellqafplkilniHpSlLPrfrG...aaaiqraleaGdketGvtvhfvdeelDtGpilaqkkveviaedtseelenrvaeaehkalveal 181
                 r +++ +++ +l+++++dl+++ gy++++++ + +a++ ++ln+HpSlLP f G   ++++  ++ aG +++G+tvhfv+ee+D Gpi++qk++ev++++ts++l+ +v+ +e  a++ea+
  MMETSP1325-20131115|8297_1   5 RDEYDADVTFALNAHGVDLVLMIGYMRIVSGSFCDAWKDRCLNVHPSLLPDFAGgmdTDVHAEVIAAGRTKSGCTVHFVTEEVDSGPIVVQKECEVLPDETSDSLKSKVQALEGVAFIEAI 125
                 5689999**********************************************9888899*********************************************************9986 PP

>> PF00586.19  AIR synthase related protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   1.1   3.2e-20   2.2e-16       4      96 .]     190     282 ..     180     282 .. 0.88

  Alignments for each domain:
  == domain 1    score: 59.7 bits;  conditional E-value: 3.2e-20
                 B--EEGG-SEEE-BEEEEE--CCCHH..T.-TTT---HHHHHHHHHHHC------EEEEEEEETTTSBHHHHHHHH---HHHHHHCT-EE----E CS
  PF00586.19   4 aavielgkdeelvvttdkvethnhpt..aidpydgaatavagnlrDiaamGAkplalldglalsnlldpealeeiveGladaanefgvplvgGdt 96 
                 a+ + + +++ lv  td+v+t+++++  a  ++ ++ ++va++++D++++GA+pl++ld++a+++l +++ ++ +veG+a+++++ ++ l+gG+t
  MMETSP1325-20131115|8297_1 190 ACGFGG-DGTILVGATDGVGTKLKVAqlANVHKYVGIDLVAMCVNDLIVQGAEPLFFLDYFATGHL-TVDLTATVVEGIAEGCRQSNCGLIGGET 282
                 344443.69999**************98658888******************************85.79999*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.33s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 1666.80
//
Query:       MMETSP1325-20131115|8300_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 377.30
//
Query:       MMETSP1325-20131115|8301_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 456.23
//
Query:       MMETSP1325-20131115|8302_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 493.65
//
Query:       MMETSP1325-20131115|8305_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 207.38
//
Query:       MMETSP1325-20131115|8306_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1   10.0   5.6        1.5    9.5   0.6    2.4  2  PF13428.1 Tetratricopeptide repeat
        4.1    7.7  12.5        4.8    7.5   8.3    1.4  1  PF11740.3 Plasmid replication region DNA-binding N-term


Domain annotation for each model (and alignments):
>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.6   0.00022       1.5       2      40 ..      18      59 ..      17      63 .. 0.84
   2 ?    2.6   0.5     0.037   2.5e+02      13      26 ..      65      78 ..      56      81 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00022
   PF13428.1  2 eallalarallalGdpde...AiallrralalaPddaealll 40
                ++l+al+ a+ a+ +p     Aia  ++a++l+ d+a+ +l+
  MMETSP1325-20131115|8306_1 18 DQLYALGVAFYARDNPSSiklAIARWEKAAELGSDEAASRLE 59
                6799***********855555*********999999988776 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.037
   PF13428.1 13 alGdpdeAiallrr 26
                +++++++A+a+l++
  MMETSP1325-20131115|8306_1 65 HAQQVADAEAALKA 78
                67899999999975 PP

>> PF11740.3  Plasmid replication region DNA-binding N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   8.3   0.00071       4.8      68     110 ..      40      82 ..      26      83 .] 0.84

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00071
   PF11740.3  68 aelvaalwqaaqeeaeerlaaaraeaeaeraaleaelaeaaar 110
                  + ++++++   +ea+ rl++ar+++++++a++ea+l++ ++r
  MMETSP1325-20131115|8306_1  40 IARWEKAAELGSDEAASRLEEAREKHAQQVADAEAALKAKQER 82 
                 4557888999999************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       592  (0.0433002); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 382.50
//
Query:       MMETSP1325-20131115|8307_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        44  (0.00321826); expected 273.4 (0.02)
Passed bias filter:                       44  (0.00321826); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|8303_1  [L=394]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       661  (0.048347); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.34s 00:00:01.06 Elapsed: 00:00:00.57
# Mc/sec: 1627.87
//
Query:       MMETSP1325-20131115|8304_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.2   0.0    0.00017   20.9   0.0    1.2  1  PF04525.7  Tubby C 2
  ------ inclusion threshold ------
      0.076   12.0   0.2      0.097   11.6   0.1    1.2  1  PF03803.10 Scramblase


Domain annotation for each model (and alignments):
>> PF04525.7  Tubby C 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.5e-08   0.00017     127     187 .]      26      84 ..       1      84 [. 0.88

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 2.5e-08
                 SEEEE--TTTT--EEE-----EEEEEEE------------SEEEEE-TTSBHHHHHHHHHH CS
   PF04525.7 127 dfeikGsfldrsckivdesdkliAevkrKetikgvllgkdvyklvVkpevDkaliiaLvvv 187
                 df+ +Gsf++r+++  +  +++iA v r  +  +v++  d y+++V+ +vD+a + a+ vv
  MMETSP1325-20131115|8304_1  26 DFTAEGSFSERKYTFKNGLGETIARVGR--NFFEVVTDVDEYQVEVAAGVDAAAVLAVAVV 84 
                 799***********************95..7899999*******************99986 PP

>> PF03803.10  Scramblase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.4e-05     0.097     149     219 ..      26      88 ..       2      92 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.4e-05
  PF03803.10 149 lvkisacvldkeFevktadgsevvgsisrkwsGllrEaftDadtyvvrFpldLdvklkavllgaafliDfd 219
                  ++++  +++++++ k+  g e+++++ r++    +E+ tD d+y v+    +d    a +l+ a+ iD d
  MMETSP1325-20131115|8304_1  26 DFTAEGSFSERKYTFKNGLG-ETIARVGRNF----FEVVTDVDEYQVEVAAGVDA---AAVLAVAVVIDED 88 
                 45677789999999999888.99******98....79**********99887764...5567888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 497.02
//
Query:       MMETSP1325-20131115|8309_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1303.62
//
Query:       MMETSP1325-20131115|8310_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 1212.85
//
Query:       MMETSP1325-20131115|8312_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-13   49.4   0.6    6.3e-13   48.7   0.4    1.4  1  PF02978.14 Signal peptide binding domain
  ------ inclusion threshold ------
      0.038   14.2   0.2      0.045   14.0   0.2    1.2  1  PF00428.14 60s Acidic ribosomal protein
       0.14   11.7   0.2       0.16   11.5   0.1    1.3  1  PF05991.6  YacP-like NYN domain


Domain annotation for each model (and alignments):
>> PF02978.14  Signal peptide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.4   1.4e-16   6.3e-13      58     104 .]       1      52 [.       1      52 [. 0.93

  Alignments for each domain:
  == domain 1    score: 48.7 bits;  conditional E-value: 1.4e-16
                 CCS-HHHHH-GGG-.....-HHHHHHHH------HHHHHHHHHHHHHHHHHT CS
  PF02978.14  58 dSMTkkErqnpell.....edsRvrRiakGsGtsveevneLlkqfkqmkkmm 104
                 +SMTkkEr+np ll     ++sR +RiakGsG + ++ + +l++f+qm++mm
  MMETSP1325-20131115|8312_1   1 QSMTKKERSNPALLisdktSTSRLQRIAKGSGNTLADAQAFLSEFQQMRTMM 52 
                 7************98776555******************************9 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.2   9.9e-06     0.045      19      75 ..      35      93 ..      18     102 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 9.9e-06
  PF00428.14 19 eaerlkllvkalegkdikeliangsakla..aaaaaaaaaaaaaaaaaaaeeekkeeee 75
                 a++ + l ++ ++ ++ + +++g+  +    aaaa+a++a++ +  a+    kk++++
  MMETSP1325-20131115|8312_1 35 LADAQAFLSEFQQMRTMMSRMSKGAGLGGdpMAAAAGAPGAQPMGNRAQRRSSKKKKAK 93
                45555556666667777777777764444976666777777777766666666666654 PP

>> PF05991.6  YacP-like NYN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.5e-05      0.16     101     136 ..      19      54 ..       3      97 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.5e-05
   PF05991.6 101 TsDraeqlvvfgkGAerisarelaeevkeaekkvkk 136
                 Ts +  q++++g+G +  +a+++++e++++++ +++
  MMETSP1325-20131115|8312_1  19 TSTSRLQRIAKGSGNTLADAQAFLSEFQQMRTMMSR 54 
                 899999************************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       481  (0.0351814); expected 273.4 (0.02)
Passed bias filter:                      390  (0.0285255); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 541.79
//
Query:       MMETSP1325-20131115|8313_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|8314_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       583  (0.0426419); expected 273.4 (0.02)
Passed bias filter:                      451  (0.0329871); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 337.27
//
Query:       MMETSP1325-20131115|8315_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.047   13.3   0.8      0.074   12.6   0.1    1.7  2  PF06677.7 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
        0.1   12.2   0.0          3    7.5   0.0    2.2  2  PF12088.3 Protein of unknown function (DUF3565)


Domain annotation for each model (and alignments):
>> PF06677.7  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.73     5e+03       8      14 ..      43      49 ..      42      49 .. 0.83
   2 ?   12.6   0.1   1.1e-05     0.074       9      28 ..      76      97 ..      66      99 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.73
   PF06677.7  8 lLlkGat 14
                lL +Ga+
  MMETSP1325-20131115|8315_1 43 LLNQGAK 49
                7999997 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 1.1e-05
   PF06677.7  9 LlkGatM..LdehCpkCgtpLf 28
                +++G +M  +d  C kC+ p++
  MMETSP1325-20131115|8315_1 76 VRRGDKMigTDIACTKCKYPML 97
                57999**555779*******97 PP

>> PF12088.3  Protein of unknown function (DUF3565)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.016   1.1e+02      27      41 ..      34      48 ..      32      53 .. 0.83
   2 ?    7.5   0.0   0.00045         3      42      55 ..      80      93 ..      73      97 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.016
   PF12088.3 27 PPwqsRaWvlteegR 41
                PP  sR+W l ++g 
  MMETSP1325-20131115|8315_1 34 PPDSSRDWALLNQGA 48
                999*****9988875 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.00045
   PF12088.3 42 esmlgqelnCkkcd 55
                ++m+g++++C kc+
  MMETSP1325-20131115|8315_1 80 DKMIGTDIACTKCK 93
                68***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 548.50
//
Query:       MMETSP1325-20131115|8311_1  [L=345]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-12   45.8   0.1    5.5e-12   45.1   0.1    1.3  1  PF02263.14 Guanylate-binding protein, N-terminal domain
     0.0033   16.5   0.2     0.0051   15.9   0.1    1.3  1  PF02841.9  Guanylate-binding protein, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02263.14  Guanylate-binding protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.1   8.1e-16   5.5e-12     149     253 ..      21     122 ..       5     129 .. 0.89

  Alignments for each domain:
  == domain 1    score: 45.1 bits;  conditional E-value: 8.1e-16
                 S-SEEEEEEEEEEE--TTTS--------HHHHHHHCT----SSSSCT...HHHHHHHHEEEEEEEEEE----TTTT-SS---.BGGGS-HHHHHHHHHHHHHHHS CS
  PF02263.14 149 vkfFpdlvflvRDfsleleaegealtedeyLekrLklkkgqdeklqksnelRkcirkfFpkrkcFvldrPglkvalnakleelkedeldeeFkkqlkelvsylls 253
                  k F++l flvRD+  ++e +  +++  +++++ ++    +++ +++  e+R  i ++F+k++cF+l++Pglk+   ++  +    +lde F++ l++ +++l+s
  MMETSP1325-20131115|8311_1  21 DKAFQQLEFLVRDWP-NFEEDDTTESMLQFMDEYVHDVVMKEKAARDLTETRDQITSCFEKISCFLLPHPGLKIPK-KSYKG-TVADLDELFRSMLTTYMRRLFS 122
                 479***********7.7899999999999999999988888888999999***********************999.77888.899***************9998 PP

>> PF02841.9  Guanylate-binding protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   7.5e-07    0.0051       2     117 ..     132     254 ..     131     260 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 7.5e-07
   PF02841.9   2 gitvtGkrLasLvqtYvdaInsGa.vPclenavlalaqiEnsaAvqkAiahYeeqmeqkvklptetl...qelldlhrdcekeAievFmkrsfkd...enqkFqkeLkeslekkkedflkkne 117
                 g  +t + L   ++tYv   + G   P     ++a a+++n+ A    +++Y e+m++ v + +  +   qe+ +  ++c + A+e+F   +      +    +++L+++++ ++e++   n 
  MMETSP1325-20131115|8311_1 132 GRALTAPELSVYIKTYVGLFQDGRtFPEAMTVLQATAEANNRNALTLGFKKYAEEMDKLVGPGKSKYvkkQEFEEHCTACRTGAMELFDGMATMGapaAIAAIRQQLEADIARAQENYEVMNT 254
                 6678999999999**********7369999999*************************9876665433349*****************88775542446677888888888888888876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       528  (0.0386191); expected 273.4 (0.02)
Passed bias filter:                      451  (0.0329871); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.53
# Mc/sec: 1559.89
//
Query:       MMETSP1325-20131115|8316_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-20   71.1   0.0    2.5e-12   46.1   0.0    2.1  2  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    1.9e-14   53.3   0.0      3e-10   39.8   0.0    2.1  2  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    5.4e-08   32.4   0.0     0.0028   17.3   0.0    2.3  2  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   6.6e-09     3e-05      40      69 ..       2      31 ..       1      32 [. 0.96
   2 !   46.1   0.0   5.5e-16   2.5e-12       1      65 [.      65     131 ..      65     133 .] 0.94

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 6.6e-09
                -EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17 40 gfafVeFeseedaekAlealngkklggrel 69
                gf++V+F+++e  e A++a+ng  ++gr+l
  MMETSP1325-20131115|8316_1  2 GFGIVRFDTPERSEVAINAMNGFVFEGRTL 31
                9***************************98 PP

  == domain 2    score: 46.1 bits;  conditional E-value: 5.5e-16
                 EEEESSTTTSSHHHHHHHHCTCTCE.EEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTTEBET CS
  PF00076.17   1 lfVgnLppdvteeeLkelFskfGpi.esiklvrd.etgrskgfafVeFeseedaekAlealngkklg 65 
                 lf +nL +  t+++L ++Fs+ G+  +s+ + ++  +grskg + V +e++e+a++A+ +ln++ l+
  MMETSP1325-20131115|8316_1  65 LFFTNLDWKSTDDDLFQHFSQAGSTpTSAAVQKNeANGRSKGWGLVMYETPEEAKSAMLQLNNTDLD 131
                 6789*********************899999999*****************************9987 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   4.1e-05      0.19      40      68 ..       2      31 ..       1      32 [. 0.95
   2 !   39.8   0.0   6.7e-14     3e-10       1      63 [.      65     130 ..      65     132 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.1e-05
   PF14259.1 40 gfAfvefeseedAqkalkkln.lvlkgrti 68
                gf++v f+++e  + a++++n  v+ grt+
  MMETSP1325-20131115|8316_1  2 GFGIVRFDTPERSEVAINAMNgFVFEGRTL 31
                89******************99******98 PP

  == domain 2    score: 39.8 bits;  conditional E-value: 6.7e-14
   PF14259.1   1 lyvrglppsvteedlreffspygk.vegvriprnkd.grgrgfAfvefeseedAqkalkkln.lvl 63 
                 l+ ++l +++t++dl+++fs++g+  ++  + +n   gr++g ++v +e++e+A+ a+ +ln + l
  MMETSP1325-20131115|8316_1  65 LFFTNLDWKSTDDDLFQHFSQAGStPTSAAVQKNEAnGRSKGWGLVMYETPEEAKSAMLQLNnTDL 130
                 5779******************96489********99*********************99876766 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   6.2e-07    0.0028      22      54 ..       2      34 ..       1      36 [. 0.94
   2 !   13.1   0.0   1.3e-05     0.058      22      47 ..     106     131 ..      93     133 .] 0.85

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 6.2e-07
   PF13893.1 22 gqAfvefdtveaArkakeylngvklygktLkve 54
                g++ v fdt+e  ++a++++ng ++ g+tL v 
  MMETSP1325-20131115|8316_1  2 GFGIVRFDTPERSEVAINAMNGFVFEGRTLDVR 34
                7899**************************986 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 1.3e-05
   PF13893.1  22 gqAfvefdtveaArkakeylngvkly 47 
                 g ++v ++t+e+A+ a+ +ln+++l+
  MMETSP1325-20131115|8316_1 106 GWGLVMYETPEEAKSAMLQLNNTDLD 131
                 667899*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 663.99
//
Query:       MMETSP1325-20131115|8317_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.24   10.7  11.5        0.3   10.3   7.9    1.2  1  PF01963.12 TraB family
       0.33   10.4   5.4       0.38   10.2   3.7    1.1  1  PF03962.10 Mnd1 family
        0.8    9.8   6.2       0.83    9.7   4.3    1.1  1  PF09736.4  Pre-mRNA-splicing factor of RES complex
       0.81    7.7  23.9       0.81    7.7  16.6    1.0  1  PF09770.4  Topoisomerase II-associated protein PAT1
        3.7    4.6  14.4        3.9    4.5  10.0    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
        6.5    6.7   8.6        7.7    6.5   6.0    1.1  1  PF04891.7  NifQ


Domain annotation for each model (and alignments):
>> PF01963.12  TraB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   7.9   0.00013       0.3     101     165 ..       5      73 ..       1      96 [. 0.71

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00013
  PF01963.12 101 wllalslalaafqkglakdlgvdpglemraaaegakvlg.Ledreiqitllral.....sleeqlkllrsl 165
                 ++ a+  a+aa q+g+ ++ g+dp+ +m+  a++ + ++ +e  ++q + ++al         q +l +++
  MMETSP1325-20131115|8317_1   5 AAQAAAAAAAAGQAGMMQQAGMDPQQMMQGMAQQQQLQQmMEAQQQQQAAQAALqnqdpA--VQQQLQQQA 73 
                 56677788889999*************************888888888888888888552..233333333 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.7   0.00017      0.38     103     151 ..      32      80 ..       3      85 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00017
  PF03962.10 103 eereelleelkeleeelkklkkeleklakldpekveklkeetevakesa 151
                  +  +++++l++++e  ++ ++  ++l+++dp++ ++l+++   a++ a
  MMETSP1325-20131115|8317_1  32 MQGMAQQQQLQQMMEAQQQQQAAQAALQNQDPAVQQQLQQQAAAALAGA 80 
                 3334566777777777777777777888************999888766 PP

>> PF09736.4  Pre-mRNA-splicing factor of RES complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   4.3   0.00036      0.83      36      81 ..      28      73 ..       3      90 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00036
   PF09736.4 36 ekewgkglvqkeeaekkleeeekakkkplaryeddedldeelkeke 81
                 +++ +g++q+++ ++++e ++++++++ a +++d  ++++l+++ 
  MMETSP1325-20131115|8317_1 28 PQQMMQGMAQQQQLQQMMEAQQQQQAAQAALQNQDPAVQQQLQQQA 73
                578999********************999*************9986 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  16.6   0.00036      0.81     185     251 ..      12      76 ..       1      99 [. 0.40

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00036
   PF09770.4 185 qspprqaalpqqakpelpsqypqppqqlqqevqqqlqqapsqapaqaplpaqlpqqlqnlqqqqlpq 251
                 +++  qa + qq   ++ +q+++ +  +qq++qq++  +++q+ aqa+l++q p+++q+lqqq++ +
  MMETSP1325-20131115|8317_1  12 AAAAGQAGMMQQ--AGMDPQQMMQGMAQQQQLQQMMEAQQQQQAAQAALQNQDPAVQQQLQQQAAAA 76 
                 222222211111..11111111111112223333333333333444444666666666666444433 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  10.0    0.0017       3.9     446     511 ..       9      74 ..       3      92 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.0017
   PF12128.3 446 elesrleelklrldsatateeeleqleaadealekaqeelekaeaevealqseeeqlrkkrdeale 511
                 + + +++ +   +++a++++++++q  a++++l+++ e++++++a++ alq++  +++++  ++  
  MMETSP1325-20131115|8317_1   9 AAAAAAAGQAGMMQQAGMDPQQMMQGMAQQQQLQQMMEAQQQQQAAQAALQNQDPAVQQQLQQQAA 74 
                 45556666778899***************************************9999888665543 PP

>> PF04891.7  NifQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   6.0    0.0034       7.7       9      77 ..       8      78 ..       3     100 .. 0.52

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0034
   PF04891.7  9 valeeaeagkaalaealGlsaeelaallarlfp.aalealaaealklaeeleeereeeeedlralLlah.r 77
                +a+++a+ag+a + ++ G++++++ + +a++ + +++ ++++++++++++l++++++ +++l++   a  +
  MMETSP1325-20131115|8317_1  8 AAAAAAAAGQAGMMQQAGMDPQQMMQGMAQQQQlQQMMEAQQQQQAAQAALQNQDPAVQQQLQQQAAAAlA 78
                55666778888888999***999887777666643333333333333333333333333333333222232 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3500  (0.255998); expected 273.4 (0.02)
Passed bias filter:                     1535  (0.112273); expected 273.4 (0.02)
Passed Vit filter:                       214  (0.0156524); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.49s 00:00:01.17 Elapsed: 00:00:00.60
# Mc/sec: 411.37
//
Query:       MMETSP1325-20131115|8319_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 158.25
//
Query:       MMETSP1325-20131115|8320_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   14.7   0.0       0.04   14.3   0.0    1.2  1  PF00702.21 haloacid dehalogenase-like hydrolase
      0.032   13.9   0.1       0.18   11.4   0.0    1.9  2  PF00670.16 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
      0.035   14.1   0.0      0.053   13.5   0.0    1.4  1  PF12710.2  haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   8.8e-06      0.04       3      20 ..     114     166 ..     112     197 .. 0.66

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 8.8e-06
                 EEEEECCTTTBETHHHH...................................H CS
                 xxxxxxxxxxxxxxxxx...................................x RF
  PF00702.21   3 tvvfDktGTLtegepsv...................................l 20 
                  v++DktGTLt +e++                                     
  MMETSP1325-20131115|8320_1 114 YVFSDKTGTLTCNEMKFrsssvggiifghpqgdkmltemeqtggdatvemdgN 166
                 699*************9999999988888766665555555555555544442 PP

>> PF00670.16  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0     4e-05      0.18      54     111 ..      72     129 ..      65     135 .. 0.88
   2 ?    0.1   0.0      0.13   5.8e+02      63      81 ..     162     180 ..     147     192 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4e-05
                 S-HHHHHHHHC---EE--HHHCTTT-SEEEE-----SSB-HHHHCCS-TTEEEEE--- CS
  PF00670.16  54 vdPicalqaameGfevvtleevvkkadivvtttGnkdiitlehlekmkddaivcniGh 111
                 v+ ++ lqa m G++v   ++ +++  +  t+  n d+ + e + + k  ++ cn   
  MMETSP1325-20131115|8320_1  72 VEFVNLLQAYMIGYDVEMYDDPSDTPAVARTSNMNGDLGQIEYVFSDKTGTLTCNEMK 129
                 78899********************************999999999999999998655 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.13
                 HC---EE--HHHCTTT-SE CS
  PF00670.16  63 ameGfevvtleevvkkadi 81 
                  m+G +v+ l+ ++++a+ 
  MMETSP1325-20131115|8320_1 162 EMDGNQVRSLDALAAQANG 180
                 5999999999998888774 PP

>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.2e-05     0.053       1      21 [.     115     135 ..     115     194 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.2e-05
                 EEE------B---........ CS
   PF12710.2   1 avFDkDGTLteddtdflryll 21 
                 +++Dk+GTLt++++ f    +
  MMETSP1325-20131115|8320_1 115 VFSDKTGTLTCNEMKFRSSSV 135
                 799**********86655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 953.75
//
Query:       MMETSP1325-20131115|8322_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1188.19
//
Query:       MMETSP1325-20131115|8318_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-83  277.1   0.0    9.6e-83  276.8   0.0    1.0  1  PF00121.13 Triosephosphate isomerase


Domain annotation for each model (and alignments):
>> PF00121.13  Triosephosphate isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  276.8   0.0   7.1e-87   9.6e-83       3     243 ..      57     298 ..      55     299 .. 0.97

  Alignments for each domain:
  == domain 1    score: 276.8 bits;  conditional E-value: 7.1e-87
                 EEEEETT-S-HHHHHHHHHHHHCCCHHTTTEEEEEEE-GGGHHHHHHHC.STTSEEEES--BSS-----TTHHBHHHHHHTT--EEEESEHHHHHHS....-BHHHHHHHHHHHHHTT-EEEEEESCEHHHHHTTHHHHHHHHHHHHHHHTSSTGGGGGEEEEEEEGGG------HHHHHHHHHHHHHHHHHHHHTHHHHHCCSEEE------TTTHHHHHTSTT----EE-HGTTSCHHHHHH CS
  PF00121.13   3 iigNwKmnktleeakellkkllaaklkeekvevvvappflyLesvkkalkeskikvgaQnvsaedsGafTGevsaemlkdlgvkyviiGHSErrqyfg...etdeevakkvkaalkagltpvlCvgEtleereagktkevlkeqlkailekldeealknliiAYePvwAIGtgkvatpeeaqevhaairkelaekfskevaeevrilyGGsvnaenakellkqkdvdGlLvGgaslkaesflai 243
                  +gNwK+n++ ++++ l+++l +      ++ev+vappfl++  v   ++  +i vg Qnvs   +Ga TGe+sa+m+kd+gv++vi+GHSErr+ fg   e++e va k+k a++ gl ++ CvgE+leer+agkt+ev+ eqlk    kl+e +++n++iAYePvwAIGtg++atpe+aqevh+air++la+++s +va e+ri+yGGs++ +na +llkq+d+dG L+Ggaslkae f++i
  MMETSP1325-20131115|8318_1  57 FGGNWKCNGDVKSVDGLVETLGKCGPIPANAEVMVAPPFLHVPIVTGTIR-PDIAVGGQNVSLFPNGARTGEISAAMMKDMGVSWVIVGHSERREGFGmagESSELVALKTKVAVSGGLSVMACVGEKLEERDAGKTLEVCYEQLKPLATKLNEDDWANVVIAYEPVWAIGTGRTATPEQAQEVHKAIRDWLAKNVSDKVAAETRIVYGGSMKGKNAPDLLKQPDIDGGLIGGASLKAE-FFDI 298
                 689*****************877776669*******************95.9*******************************************9987789***************************************************************************************************************************************88.7777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.34s 00:00:00.94 Elapsed: 00:00:00.59
# Mc/sec: 1238.79
//
Query:       MMETSP1325-20131115|8321_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.001   18.6   0.1        8.7    6.7   0.0    3.5  3  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0   0.00087        12       3      21 ..      10      29 ..       8      30 .. 0.86
   2 !    6.7   0.0   0.00064       8.7       5      19 ..      40      55 ..      39      58 .. 0.88
   3 ?    1.3   0.0     0.036   4.9e+02       4      17 ..      64      78 ..      64      83 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.00087
                SEEEETSSBCB.CHHHHHHH CS
  PF00560.28  3 eeLdLsgNnlt.slppslsn 21
                + Ld s+N lt +lp +l+ 
  MMETSP1325-20131115|8321_1 10 TQLDASNNALTgTLPTELGE 29
                679************98876 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.00064
                EEETSSBCB.CHHHHH CS
  PF00560.28  5 LdLsgNnlt.slppsl 19
                L+L +N+lt s+p +l
  MMETSP1325-20131115|8321_1 40 LNLASNQLTfSIPTEL 55
                9********99**876 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.036
                EEEETSSBCB.CHHH CS
  PF00560.28  4 eLdLsgNnlt.slpp 17
                +L Ls+N l+  +p 
  MMETSP1325-20131115|8321_1 64 RLELSDNALCgRVPT 78
                589****99977876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 1329.74
//
Query:       MMETSP1325-20131115|8324_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-45  152.6   0.1    1.3e-44  151.9   0.1    1.4  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
    5.5e-09   35.3   0.0    1.1e-08   34.4   0.0    1.5  1  PF00378.15 Enoyl-CoA hydratase/isomerase family
     0.0087   15.6   0.1      0.014   14.9   0.1    1.3  1  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
  ------ inclusion threshold ------
      0.026   14.3   0.9      0.048   13.4   0.6    1.6  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
      0.073   12.1   0.2       0.13   11.2   0.1    1.4  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
       0.13   12.2   0.1        0.4   10.6   0.1    1.9  2  PF13450.1  NAD(P)-binding Rossmann-like domain
       0.17   11.8   0.9       0.75    9.7   0.1    2.0  2  PF01488.15 Shikimate / quinate 5-dehydrogenase


Domain annotation for each model (and alignments):
>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.9   0.1   6.5e-48   1.3e-44       1     148 [.     158     310 ..     158     311 .] 0.93

  Alignments for each domain:
  == domain 1    score: 151.9 bits;  conditional E-value: 6.5e-48
                 EEEEE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHHHHHTTCH.....HHHHHHHHHCEEEESSGCCG....G.G-SEEEE-S-SSHHHHHHHHHHHHCCS.TTSEEEE--SSS-HHHHCTTSSSGGGEE--EE-SSTTT--EEE CS
  PF02737.13   1 kvaVvGaGtmGagiAavfaragleVvlvdiseealekalerieksleklvekgklkeeeveevlarisvttdleea....v.dadlviEavvEnlelKrelfaelekvakpeailasnTSslsitelaealkrpervvglHffnPvhlmklVE 148
                 +v V+GaG+mGagiA+v a++g++V l d+++e + ++++ i  ++ek+++k+++++++++ + a++   td +++      +ad+viEav+E+l+lK++++a++e+++++++++a+nTS+++i ++a++ krpe+v+g+H+f+Pv+ mkl+E
  MMETSP1325-20131115|8324_1 158 TVSVMGAGLMGAGIAQVSAEKGYRVLLKDRDMEGVGRGEAYIGGNWEKKAKKKRMTNHQKNVAEANVVPLTDADKMwgkhFeSADMVIEAVFEDLDLKHKVIAQVEEHIPEHCVFATNTSAIPIRDIAKGSKRPENVIGMHYFSPVPNMKLLE 310
                 699*****************************************************9988888888888777765422223489*******************************************************************99 PP

>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   5.5e-12   1.1e-08     147     212 ..       2      67 ..       1      95 [. 0.92

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 5.5e-12
                 --HHHHHHHH----EEHHHHHHTTSSSEEE-GCC---HHHHHHHHHH--S--SS-HHHHHHH..HH CS
  PF00378.15 147 GvsaAlemiltgrriradeAlkvGlvdkvvpeeelveeaielakrladkpklalallkkamraale 212
                 G ++A  +il g+++r+d+A+k+Glvd vv    l+++ai+ a++lad++++a +  k+ mr  le
  MMETSP1325-20131115|8324_1   2 GYKEAVPLILQGKEVRPDKAKKIGLVDLVVDPFALEKTAIDHARQLADGSLKAKKKKKDWMRWFLE 67 
                 8899*************************************************9999999986555 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   7.3e-06     0.014       2     104 ..     159     277 ..     158     299 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 7.3e-06
                 EEEE-------HHHHHHHTTEEEEEEE-S-H.................HHHHHHHHHTSBTTTBTT-B--TTEEEES-HHHHH----CEEE-S-HH..HHHHHCCCHCCCHHCT-EEEE--- CS
  PF01210.18   2 vavlGaGswGtalAkvlaenghevrlWvree.................klieeinerrenvkylpgiklpenlvattDleealkgadiivlvVPsq..flrevlkklkgllkkdailvsltK 104
                 v+v+GaG +G  +A+v ae+g +v l +r+                  ++ +++ ++++nv+++  + l ++    +   +  + ad+++ +V       ++v+++++++++++ ++   t 
  MMETSP1325-20131115|8324_1 159 VSVMGAGLMGAGIAQVSAEKGYRVLLKDRDMegvgrgeayiggnwekkAKKKRMTNHQKNVAEANVVPLTDAD---KMWGKHFESADMVIEAVFEDldLKHKVIAQVEEHIPEHCVFATNTS 277
                 89************************99999999999999999888776667777777787776666665543...3345567778888888855311466777777777777666666555 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.6   2.4e-05     0.048       2      36 ..     157     191 ..     156     280 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.4e-05
                 BEBEEB-------HHHHHHHH---EEEE--SSHHH CS
  PF03446.10   2 kkigfiGlGvMGspmalnllkagyevavynrtkek 36 
                 k++ ++G G MG+ +a+  +++gy+v   +r+ e 
  MMETSP1325-20131115|8324_1 157 KTVSVMGAGLMGAGIAQVSAEKGYRVLLKDRDMEG 191
                 6899*************************998765 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   6.8e-05      0.13      25      69 ..     145     189 ..     136     228 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 6.8e-05
                 --GCG-B-.GGGSEEE-B-------HHHHHHHH---EEEE--SS- CS
  PF02826.14  25 sekallgkelsgktvGiiGlGrIGqavakrlkafgmkvlaydrsk 69 
                 +++++   e + ktv ++G+G +G  +a++ ++ g +vl  dr  
  MMETSP1325-20131115|8324_1 145 KKNRFGKPEHKVKTVSVMGAGLMGAGIAQVSAEKGYRVLLKDRDM 189
                 56777888999****************************999874 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00021       0.4       1      27 [.     161     187 ..     161     215 .. 0.85
   2 ?   -2.9   0.0       3.2   6.3e+03      47      55 ..     295     303 ..     288     308 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00021
   PF13450.1   1 IvGaGlsGlvaAylLakagkdvlvlek 27 
                 + GaGl G+ +A+  a++g++vl+ ++
  MMETSP1325-20131115|8324_1 161 VMGAGLMGAGIAQVSAEKGYRVLLKDR 187
                 56*********************9886 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 3.2
   PF13450.1  47 ygahifhgs 55 
                  g+h+f ++
  MMETSP1325-20131115|8324_1 295 IGMHYFSPV 303
                 599999885 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00038      0.75       9      47 ..     153     190 ..     145     197 .. 0.87
   2 ?    0.2   0.0      0.33   6.4e+02      58      85 ..     219     250 ..     204     294 .. 0.70

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00038
                 ...--EEEEE----HHHHHGGG--TTT-E.EEE----HH CS
  PF01488.15   9 slkgkkvlviGAGemarlvakhLlekgvkkiviaNRtae 47 
                 + k k+v v GAG m+  +a++ +ekg++ +++  R+ e
  MMETSP1325-20131115|8324_1 153 EHKVKTVSVMGAGLMGAGIAQVSAEKGYR-VLLKDRDME 190
                 67889***********************9.888888876 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.33
                 ..T-EE---S-HH....HHHHT-SEEEE-S-- CS
  PF01488.15  58 geevealpleele....ellaeadvvisatsa 85 
                   e++++pl++++    ++ + ad+vi a+  
  MMETSP1325-20131115|8324_1 219 VAEANVVPLTDADkmwgKHFESADMVIEAVFE 250
                 45678888888887777888889999988654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.56
# Mc/sec: 1330.83
//
Query:       MMETSP1325-20131115|8325_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 962.98
//
Query:       MMETSP1325-20131115|8327_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   13.9   0.0      0.022   13.6   0.0    1.1  1  PF10186.4 UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.6e-06     0.022     249     299 ..      74     124 ..      61     126 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.6e-06
   PF10186.4 249 dpeteaeflegvslLnanvlwLcrtqgldlplldsyetlcnllkllsslli 299
                 d + +a f+ +v+lL  nv+ Lc + g+  + l++ e++   l+ ls++++
  MMETSP1325-20131115|8327_1  74 DDLAAARFATAVHLLQNNVVRLCVKVGIPPQRLRNAEAILPNLRELSRHCE 124
                 5677899*****************999999999999999888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.56
# Mc/sec: 864.40
//
Query:       MMETSP1325-20131115|8328_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 390.52
//
Query:       MMETSP1325-20131115|8331_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 421.58
//
Query:       MMETSP1325-20131115|8332_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.067   12.4   6.7       0.07   12.3   4.6    1.0  1  PF04086.8 Signal recognition particle, alpha subunit, N-terminal
       0.11   12.0   8.3       0.11   12.0   5.8    1.1  1  PF12810.2 Glycine rich protein


Domain annotation for each model (and alignments):
>> PF04086.8  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   4.6     1e-05      0.07     167     237 ..      21      90 ..       2      91 .] 0.72

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1e-05
   PF04086.8 167 rpstpsllkaeeipggktsrrakkaaklkskessgkeksskkkaaakkakKkmRkWdadg...dedddaaLDyS 237
                 + s  ++l++ + +gg  +rr kk ++ +   + g++  ++k+    k++Kk+  W ++    +++++  LD+S
  MMETSP1325-20131115|8332_1  21 MMSARAVLAERAASGGGGRRRPKKTNSKEGGGADGED-GTGKNG---KKVKKATQWHDGSgklTKKQKDSLDRS 90 
                 4444558888888899999999999999776555555.333333...5679999**887779***********9 PP

>> PF12810.2  Glycine rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   5.8   1.5e-05      0.11     111     159 ..      32      81 ..       1      91 [] 0.65

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.5e-05
   PF12810.2 111 VAGGGGGsgndsdssggsgggleggngtsn.gsnstggtqtsggegassn 159
                  A GGGG  + ++++++ ggg  g++gt + g++++ +tq + g g+ ++
  MMETSP1325-20131115|8332_1  32 AASGGGGRRRPKKTNSKEGGGADGEDGTGKnGKKVKKATQWHDGSGKLTK 81 
                 4678888888889999*********99955488999****9999874322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|8329_1  [L=326]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-06   26.7   0.0    1.2e-05   25.1   0.0    1.9  1  PF01926.18 50S ribosome-binding GTPase
    0.00011   21.2   0.0    0.00023   20.2   0.0    1.5  1  PF03193.11 Protein of unknown function, DUF258
    0.00047   19.5   0.0     0.0021   17.4   0.0    1.9  2  PF01580.13 FtsK/SpoIIIE family
     0.0029   17.9   0.0     0.0064   16.8   0.0    1.7  1  PF08477.8  Miro-like protein
     0.0047   15.8   0.0     0.0064   15.4   0.0    1.2  1  PF00735.13 Septin
     0.0053   16.4   0.0      0.013   15.1   0.0    1.7  1  PF00350.18 Dynamin family
     0.0076   15.6   0.0      0.014   14.7   0.0    1.4  1  PF13555.1  P-loop containing region of AAA domain
     0.0094   15.5   0.1      0.017   14.7   0.1    1.4  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
  ------ inclusion threshold ------
      0.012   14.7   0.3      0.045   12.8   0.0    2.0  3  PF12846.2  AAA-like domain
      0.013   14.1   0.0       0.02   13.6   0.0    1.2  1  PF05049.8  Interferon-inducible GTPase (IIGP)
      0.013   15.6   0.0      0.017   15.3   0.0    1.3  1  PF13476.1  AAA domain
      0.015   14.8   0.0      0.025   14.0   0.0    1.3  1  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
       0.02   13.6   0.0       0.03   13.1   0.0    1.2  1  PF00437.15 Type II/IV secretion system protein
       0.05   14.2   0.0      0.096   13.3   0.0    1.5  1  PF13207.1  AAA domain
      0.054   13.5   0.0       0.17   11.8   0.0    1.8  1  PF13401.1  AAA domain
      0.057   12.7   0.1      0.098   12.0   0.0    1.4  1  PF00158.21 Sigma-54 interaction domain
      0.059   13.1   0.0       0.11   12.3   0.0    1.5  1  PF13671.1  AAA domain
       0.11   11.7   0.1       0.34   10.1   0.0    1.9  2  PF13481.1  AAA domain
       0.13   11.9   0.1       0.31   10.6   0.1    1.6  1  PF01935.12 Domain of unknown function DUF87


Domain annotation for each model (and alignments):
>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   1.7e-08   1.2e-05       2      69 ..      91     184 ..      90     231 .. 0.54

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 1.7e-08
                 EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESE.....EEE...........ETTE...........EEEEE---SSSHHHHHHHHH...HHH CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrdite.....nev...........kkek...........iilvDtPGiiegasedkeie...gik 69 
                 v++vG++ +GKSt++n L g    + + +pgt  +++      + v                          ++ +D+PG+++++  +  i    +ik
  MMETSP1325-20131115|8329_1  91 VMVVGNTGAGKSTFVNILYGC-TMRQYYKPGTKAKVWAvsedsE-VkelmrightnqS--AtfvpdvggddtFTYADCPGFLDNRGPEINIAnavNIK 184
                 89****************863.3355555555555533233320.1222333333330..13344444445689******996533333222222222 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   3.1e-07   0.00023      33      97 ..      85     167 ..      62     186 .. 0.67

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 3.1e-07
                 CTT.SBEEEE-------HHHHHHH----...............----S--------------S-BEEE-....---EEES---- CS
  PF03193.11  33 lkd.ktsvlvGqSGvGKSsLinallpel...............dlkvgevseklgrGkhTTtavellkl...segglliDtPGf 97 
                  ++ +++++vG++G+GKS+++n+l + +                 + +ev+e   r  hT +++++++    ++  + +D PGf
  MMETSP1325-20131115|8329_1  85 AEGqEIVMVVGNTGAGKSTFVNILYGCTmrqyykpgtkakvwaVSEDSEVKELM-RIGHTNQSATFVPDvggDDTFTYADCPGF 167
                 34438999****************998888889999944444333333333332.33477777776665232333456777777 PP

>> PF01580.13  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0     3e-06    0.0021      13      58 ..      63     108 ..      54     119 .. 0.82
   2 ?   -0.8   0.0       1.1   7.6e+02      82     113 ..     250     280 ..     244     284 .. 0.66

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 3e-06
  PF01580.13  13 keysrltialgkegsgkplvadlvkaphlLiaGatgsGKStflrtL 58 
                 +++++l +++  + +g+   + + + + ++++G+tg+GKStf++ L
  MMETSP1325-20131115|8329_1  63 TDDDSLAVLMHCIKMGEEAASKAEGQEIVMVVGNTGAGKSTFVNIL 108
                 456666666666669999999999999****************965 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 1.1
  PF01580.13  82 elaaledlphllsvavatdpekalraleelva 113
                 el +l+d+ +l s  +a  +e +++++ el++
  MMETSP1325-20131115|8329_1 250 ELIELSDIRDLMS-DTAGMSETMAQCVHELCD 280
                 5667778888877.666666666666666665 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   8.8e-06    0.0064       2      49 ..      91     155 ..      90     206 .. 0.69

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 8.8e-06
   PF08477.8   2 vvvvGdkgvGKssllsqlvgeefp................kkklpeei.kgdtlavktlevdvdt 49 
                 v+vvG++g+GKs++++ l g ++                 +++++e + +g+t ++ t++ dv +
  MMETSP1325-20131115|8329_1  91 VMVVGNTGAGKSTFVNILYGCTMRqyykpgtkakvwavseDSEVKELMrIGHTNQSATFVPDVGG 155
                 89****************99999866766666666655554443333313444445555555555 PP

>> PF00735.13  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   8.9e-06    0.0064       7      33 ..      91     117 ..      86     183 .. 0.69

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 8.9e-06
  PF00735.13   7 lmvvGesglGkttlintlfetdlieee 33 
                 +mvvG+ g Gk+t++n l+  ++ +  
  MMETSP1325-20131115|8329_1  91 VMVVGNTGAGKSTFVNILYGCTMRQYY 117
                 8*****************987665553 PP

>> PF00350.18  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.9e-05     0.013       1      20 [.      91     110 ..      91     136 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.9e-05
                 EEEE--TT---HHHHHHH-- CS
  PF00350.18   1 iavvGsqSaGKSSllnaLlg 20 
                 ++vvG+  aGKS+++n L g
  MMETSP1325-20131115|8329_1  91 VMVVGNTGAGKSTFVNILYG 110
                 79***************998 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0     2e-05     0.014      23      40 ..      88     105 ..      77     120 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2e-05
   PF13555.1  23 gkntlltGasGsGKSTll 40 
                 ++ ++++G++G+GKST++
  MMETSP1325-20131115|8329_1  88 QEIVMVVGNTGAGKSTFV 105
                 45799***********98 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.1   2.4e-05     0.017       2      32 ..      90     120 ..      89     126 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.4e-05
                 EEEEE-------HHHHHHHHHHHHH------ CS
   PF03205.9   2 ivavvGpkdsGKTtlieklvnklkergyrva 32 
                 iv+vvG+++ GK+t++ +l     ++ y++ 
  MMETSP1325-20131115|8329_1  90 IVMVVGNTGAGKSTFVNILYGCTMRQYYKPG 120
                 8****************99988888888776 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.5     4e+03      91     227 ..      46      72 ..      25      86 .. 0.49
   2 ?   12.8   0.0   6.2e-05     0.045       4      23 ..      91     114 ..      88     135 .. 0.81
   3 ?   -1.6   0.0       1.5   1.1e+03     283     310 ..     240     262 ..     236     275 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 5.5
   PF12846.2  91 lllalletdselrnrpledeeeaalsralrelyeeegiatlaqrqayPtlgdllealreeeeelaeealarderreaaeelalalerlldgalgelFdgpttfdldldariivfdlsglkgpgteeedkalaaavll 227
                 ++ al++++  + n +l+d+++ a                                                                                                              vl+
  MMETSP1325-20131115|8329_1  46 EMWALVQNKLSNPNAQLTDDDSLA--------------------------------------------------------------------------------------------------------------VLM 72 
                 444444433333333333333333..............................................................................................................333 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 6.2e-05
   PF12846.2   4 tlilGppGsGKSvllkkl....vl 23 
                 ++++G +G+GKS++++ l    ++
  MMETSP1325-20131115|8329_1  91 VMVVGNTGAGKSTFVNILygctMR 114
                 79**************98655444 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 1.5
   PF12846.2 283 atQslsdlppsekakgilnnsttkiilr 310
                 ++Q ++ ++++     ++++s+++ ++ 
  MMETSP1325-20131115|8329_1 240 ISQLPKSVDDE-----LIELSDIRDLMS 262
                 89999999999.....999999987765 PP

>> PF05049.8  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.7e-05      0.02      29      56 ..      83     109 ..      60     114 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.7e-05
                 HHHHH--EEEEEE-------HHHHHHH- CS
   PF05049.8  29 keiesaklkiavtGdsGnGkssFinaLR 56 
                 +++e +++ ++v+G++G+Gks+F+n L 
  MMETSP1325-20131115|8329_1  83 SKAEGQEI-VMVVGNTGAGKSTFVNILY 109
                 44444444.899*************985 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.0   2.3e-05     0.017      21      54 ..      90     129 ..      86     279 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 2.3e-05
   PF13476.1  21 ltlItGpNGsGKTTildAiclaLygktsrlkks......r 54 
                 ++ ++G++G+GK+T+ + ++ ++  +  ++  +      +
  MMETSP1325-20131115|8329_1  90 IVMVVGNTGAGKSTFVNILYGCTMRQYYKPGTKakvwavS 129
                 7889***************999988764443333345532 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.5e-05     0.025       2      34 ..      75     107 ..      74     116 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 3.5e-05
  PF02367.12   2 lelgkrlaellkagdvvlLsGdlGaGKTtlvkg 34 
                 +++g++ a++ +  ++v+  G+ GaGK t+v  
  MMETSP1325-20131115|8329_1  75 IKMGEEAASKAEGQEIVMVVGNTGAGKSTFVNI 107
                 57999*************************975 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.1e-05      0.03     119     149 ..      80     109 ..      31     117 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.1e-05
  PF00437.15 119 evlrqavqargnilvsGgTgsGKttllnall 149
                 e+ ++a + + +++v G Tg GK+t++n+l 
  MMETSP1325-20131115|8329_1  80 EAASKA-EGQEIVMVVGNTGAGKSTFVNILY 109
                 555666.78999***************9875 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   0.00013     0.096       1      26 [.      90     112 ..      90     159 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.00013
                 EE--B--TT---HHHHHHHHHHSTEE CS
   PF13207.1   1 viaitGppGsGKsTlakeLaerlglp 26 
                 ++ ++G +G+GKsT+ + L   +g+ 
  MMETSP1325-20131115|8329_1  90 IVMVVGNTGAGKSTFVNIL---YGCT 112
                 799*************999...5555 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00024      0.17       2      22 ..      86     106 ..      84     137 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00024
   PF13401.1   2 esagilvvtGesGvGKTtllr 22 
                 e++ i++v+G++G+GK+t+++
  MMETSP1325-20131115|8329_1  86 EGQEIVMVVGNTGAGKSTFVN 106
                 5899**************986 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00014     0.098      13      49 ..      79     115 ..      69     143 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00014
                 HHHHHHTTS-S-EEEE-------HHHHHHHHHTSTTT CS
  PF00158.21  13 eqikkvaktdltvlitGesGtGKellAraiheaskrk 49 
                 e++++ a+ +  v+++G++G+GK+++ + ++  + r+
  MMETSP1325-20131115|8329_1  79 EEAASKAEGQEIVMVVGNTGAGKSTFVNILYGCTMRQ 115
                 556666777789*****************99866654 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00015      0.11       1      20 [.      90     109 ..      90     163 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00015
   PF13671.1   1 lvllvGlpGsGKstlaerll 20 
                 +v++vG  G+GKst+++ l+
  MMETSP1325-20131115|8329_1  90 IVMVVGNTGAGKSTFVNILY 109
                 69*************76553 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       4.7   3.4e+03       5      29 ..       4      28 ..       2      34 .. 0.77
   2 ?   10.1   0.0   0.00047      0.34      34      90 ..      89     140 ..      83     198 .. 0.71

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 4.7
   PF13481.1  5 lelltvsaedldtppppldwlvkgl 29
                +e++t +a+ ++++pp+++ ++ +l
  MMETSP1325-20131115|8329_1  4 VEAKTAAANNSQNRPPEPKEIITEL 28
                5677788888999999999888665 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00047
   PF13481.1  34 sltllaGapgtGKStlalqlaaavatGepflgpvvp.epgrVlylsaEdseaelrrrl 90 
                 ++++++G +g+GKSt++  l ++ ++       ++p ++++V+ +  Edse +   r+
  MMETSP1325-20131115|8329_1  89 EIVMVVGNTGAGKSTFVNILYGCTMRQY-----YKPgTKAKVWAV-SEDSEVKELMRI 140
                 689*************977777777533.....445144555555.588874444444 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00044      0.31      28      43 ..      93     108 ..      90     122 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00044
  PF01935.12  28 ilgsTGsGKSntvavL 43 
                 ++g TG+GKS++v +L
  MMETSP1325-20131115|8329_1  93 VVGNTGAGKSTFVNIL 108
                 89***********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      488  (0.0356934); expected 273.4 (0.02)
Passed Vit filter:                       104  (0.00760679); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.49
# Mc/sec: 1594.31
//
Query:       MMETSP1325-20131115|8334_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 488.67
//
Query:       MMETSP1325-20131115|8330_1  [L=575]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.5e-143  478.8   0.2   1.7e-143  478.6   0.2    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  478.6   0.2  1.2e-147  1.7e-143       1     485 [.      37     527 ..      37     530 .. 0.97

  Alignments for each domain:
  == domain 1    score: 478.6 bits;  conditional E-value: 1.2e-147
  PF00118.19   1 ladivkttLGPkGrnkmlvnkggkivitndgatilkelelqhpvakllveaaksqdeevGDGtttaviLageLleeaeklikagihpteiirglelaleialkaLekisislsvdk.reellkvartslnsklssresellsklvvdAvkiieeeaeldvgnigvikieggsledselieGvvldkgylsp...dmpkrlenpkillldcsleteke.tktkvvlkdaeelekleeaeekqllpllekivesgvnlviiakgiddealhfLakngilalrrvkkedlerlakltgatavsrlesleeedlGkakkveeeeigedkttliegestlsgkvatillrgateveldeleraiedalravkaalkdegvvpGGGaaelelskkLreeakslsgkeqlgieifakAleaipktLaeNagldpkevlaklkaah....kkgenlgidaetgeiidlveagilDplkvkrsalksavevasliLtidqiik 485
                 +ad v+ttLGP+G++k++++  + ++i+ndgati+k l++ hp+ak lv+++ sqd evGDGtt++v+Lage+l++++ +++ g+hp+ i  gl++a++ a+   ++i++++     r++l+  a t+lnskl+s+++ l++ +vvdAv+i++ e + d++++g++k++gg++++s l+eGv+++k + ++    m+k+ +npkil+l+++le ++e  +++v+++d+ +++ +++ae++++ ++l+k+vesg+++++++  i+d+a +++a++g+++  rv+ +dl+r+a +tg+++ s++++l++e lG+++++ee+++g++++ +++  +++++k+ati+lrg +e++++e  r+i+dal +vk+ l + +vv+GGGa+e+e+sk+Lre+a ++ gk+ql++++fakAle++p++L+eNag+d++ vl++l+++h    + g + g+d++++ i++ +e g+++p+  k +++++a+e+a+ iL+id+ ++
  MMETSP1325-20131115|8330_1  37 VADTVRTTLGPRGMDKLVFDG-QRVTISNDGATIMKLLDIVHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEVLKQIKPFVEEGLHPQIIMGGLRKAAQVAVARVKEIAVDIGAADnRSMLETFAGTALNSKLISNQKALFCPMVVDAVSILDMEPAPDLDMVGIKKVPGGDVTQSFLVEGVAFKKAFSYAgfeMMQKQYTNPKILILNVELELKSEkENAEVRITDPGDYQSIVDAEWQIIYEKLDKCVESGAQIILSKLPIGDLATQYFADRGLFCAGRVDAADLKRVAQATGGHMQSTVNDLTPEVLGECGEFEERQVGDERYNVFT--KCTNAKTATIVLRGGSEQFIEESHRSIHDALMIVKRGLMSARVVAGGGAIEMEVSKFLREYARTIMGKQQLIVSAFAKALEVVPRQLCENAGFDATTVLNELRQSHalaaDVGRWSGVDMNNEGICNTMESGVWEPAVNKINSYSAAAEAACVILSIDETVR 527
                 689***************965.5*************************************************************************************999988878********************************77766669************************************9999999***************9988***************************************************************************************************************..9*******************************************************************************************************9976555555*********************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (575 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.92u 0.35s 00:00:01.27 Elapsed: 00:00:00.56
# Mc/sec: 2417.38
//
Query:       MMETSP1325-20131115|8336_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.75    9.9   7.6        1.2    9.2   5.3    1.3  1  PF06474.7  MltD lipid attachment motif
        4.1    7.7  13.0        4.9    7.5   9.0    1.2  1  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF06474.7  MltD lipid attachment motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.3   0.00018       1.2       8      34 .]      24      50 ..      22      50 .. 0.93

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00018
   PF06474.7  8 psvkqALTrlvkfsivfasaLLsGCQS 34
                +s+  A+++++++++++ +a+ sGC S
  MMETSP1325-20131115|8336_1 24 TSSDAAGAAAAAAAAAASAATSSGCSS 50
                78999********************65 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   9.0   0.00072       4.9      41      66 ..      12      43 ..       3      47 .. 0.45

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00072
  PF00428.14 41 ngsakla.........aaaaaaaaaaaaaaaaaaa 66
                ++sa ++         aa   +aaaaaaaaaa aa
  MMETSP1325-20131115|8336_1 12 DASADVSnsrgstssdAA---GAAAAAAAAAASAA 43
                444444455555533333...33333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       567  (0.0414716); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|8337_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 380.60
//
Query:       MMETSP1325-20131115|8338_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.59
# Mc/sec: 288.38
//
Query:       MMETSP1325-20131115|8340_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          4    6.5  13.9        4.1    6.4   9.6    1.0  1  PF07174.6 Fibronectin-attachment protein (FAP)


Domain annotation for each model (and alignments):
>> PF07174.6  Fibronectin-attachment protein (FAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   9.6    0.0003       4.1      42     112 ..      31      98 ..       1     106 [. 0.53

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0003
   PF07174.6  42 ePaPs...apPstaaaaPapaapvaepapaaapapapadpnaaaPpapadPnapvPppvdPnapappapepgrv 112
                 +  P    a+Ps+aa aPapaa+ + p  ++  ++  a p    P  pa P a+  ++++ na      +pgr+
  MMETSP1325-20131115|8340_1  31 AVVPGiepAAPSAAAHAPAPAAAGTVPEASPLGSSVAAAPFVVRPLLPAAPLAAEVSAAAGNA------DPGRM 98 
                 333333337888888888888875555555555555555555555566666666666666666......44554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.70
# Mc/sec: 373.15
//
Query:       MMETSP1325-20131115|8341_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|8339_1  [L=467]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-07   30.4   0.0    8.4e-07   29.2   0.0    1.5  1  PF13419.1  Haloacid dehalogenase-like hydrolase
    1.5e-05   24.5   0.1    2.9e-05   23.5   0.1    1.5  1  PF13242.1  HAD-hyrolase-like
  ------ inclusion threshold ------
       0.01   16.2   0.0       0.02   15.3   0.0    1.5  1  PF00702.21 haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF13419.1  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.8e-10   8.4e-07      77     173 ..       8     109 ..       2     111 .. 0.86

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 1.8e-10
   PF13419.1  77 elfpdvvellrrlkakglklvilSngsaeavellleklgledlfd..avftsddvgar...KPdpeayekvlerlgvkpeeilfidDsledveaAraaGirt 173
                  ++++v e+l +l ++g++  i ++  +++v   ++++ l  +f+  ++ ++++   +   KP+p++y ++++ ++ +p +++ ++Ds ++v +A +aG+  
  MMETSP1325-20131115|8339_1   8 VANEGVMETLVALNSAGVPFNIATTSGKPRVPVCVDAASLRPFFPadQIHSGESDFDPprfKPEPDVYLRAAAAIEREPANCVAVEDSGSGVGSASNAGMGM 109
                 6899*********98*****************99999988876665377777543333355**************************************975 PP

>> PF13242.1  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.1   6.4e-09   2.9e-05       4      47 ..      69     111 ..      66     149 .. 0.87

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 6.4e-09
                 --STHHHHHHH----GGTTTEEEE---.HHHHHHHHH---EE-- CS
   PF13242.1   4 KPnpgmydkalevlgappsevvmiGDslatDieaAnaaGirsil 47 
                 KP+p +y +a++  + +p+++v ++Ds  + + +A +aG+  i 
  MMETSP1325-20131115|8339_1  69 KPEPDVYLRAAAAIEREPANCVAVEDS-GSGVGSASNAGMGMIV 111
                 9**************************.************7765 PP

>> PF00702.21  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.0   4.3e-06      0.02     122     204 .]      10     106 ..       1     106 [. 0.82

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 4.3e-06
                 HHHHHHHHHHHHHTTC...EEEEESSCHHHHHHHHHHTTC....SEEEEHHH.......TTSHHHHHHHHHHHTS-GGGEEEEESSCTTHHHHHHTS CS
                 xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxx....xxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00702.21 122 kpeaaeavasLkaagi...vvlltgdnpetaeaiakqagi....dslvfaev.......kPepklfvaaieeLqidpgevamvGDgvnDapalaaAg 204
                  ++++e++ +L++ag+   ++  +g  + ++  +a+ ++     d +  +e        kPep+++++a+ +   +p ++++v+D+  ++  + +Ag
  MMETSP1325-20131115|8339_1  10 NEGVMETLVALNSAGVpfnIATTSGKPRVPVCVDAASLRPffpaDQIHSGESdfdpprfKPEPDVYLRAAAAIEREPANCVAVEDSGSGVGSASNAG 106
                 789**************7777777898988888888888766765555555599************999999999**********998888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.34s 00:00:01.07 Elapsed: 00:00:00.51
# Mc/sec: 2194.31
//
Query:       MMETSP1325-20131115|8342_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 502.31
//
Query:       MMETSP1325-20131115|8345_1  [L=548]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       780  (0.0570509); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.91u 0.37s 00:00:01.28 Elapsed: 00:00:00.57
# Mc/sec: 2264.14
//
Query:       MMETSP1325-20131115|8349_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00048   19.1   4.3    0.00083   18.3   3.0    1.4  1  PF13248.1 zinc-ribbon domain
      0.001   18.3  12.2     0.0036   16.6   0.8    2.7  3  PF09851.4 Short C-terminal domain
     0.0051   16.4   0.7     0.0095   15.6   0.5    1.3  1  PF12773.2 Double zinc ribbon
  ------ inclusion threshold ------
       0.42   10.0   3.0       0.88    9.0   2.1    1.6  1  PF13240.1 zinc-ribbon domain
        1.3    8.7   7.0       0.45   10.2   2.8    1.7  2  PF05120.7 Gas vesicle protein G


Domain annotation for each model (and alignments):
>> PF13248.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   3.0     3e-07   0.00083       5      25 ..      46      67 ..      44      68 .. 0.93

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3e-07
   PF13248.1  5 CPnCGa.vlevdakFCpnCGap 25
                C +CGa  + +++ FC  CG+ 
  MMETSP1325-20131115|8349_1 46 CQSCGAlAVADGFEFCGVCGQS 67
                ******99************86 PP

>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.4   0.00024      0.67      13      28 ..      94     109 ..      93     110 .. 0.83
   2 ?   -3.3   0.1       2.3   6.3e+03      24      29 ..     119     124 ..     118     125 .. 0.79
   3 !   16.6   0.8   1.3e-06    0.0036      10      29 ..     159     178 ..     158     180 .. 0.91

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00024
   PF09851.4  13 arGeIteEEFeakKkk 28 
                 ++ +++ EE+e++Kk 
  MMETSP1325-20131115|8349_1  94 EEHALSSEEYEEQKKM 109
                 56689*********96 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 2.3
   PF09851.4  24 akKkkL 29 
                 ++K++L
  MMETSP1325-20131115|8349_1 119 KRKREL 124
                 799998 PP

  == domain 3    score: 16.6 bits;  conditional E-value: 1.3e-06
   PF09851.4  10 eLyarGeIteEEFeakKkkL 29 
                 eL+++G+++e+ Fe +K++ 
  MMETSP1325-20131115|8349_1 159 ELKDKGILDEAQFEVAKAEA 178
                 9****************996 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.5   3.5e-06    0.0095      27      50 .]      41      65 ..      26      65 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 3.5e-06
   PF12773.2 27 aeevlCpsCges.vspkarfCpnCG 50
                a++  C+sCg+  v  + +fC  CG
  MMETSP1325-20131115|8349_1 41 AKKGPCQSCGALaVADGFEFCGVCG 65
                55678******88***********9 PP

>> PF13240.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.1   0.00032      0.88       2      21 ..      46      66 ..      45      68 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00032
   PF13240.1  2 CPkCGa.eledgakFCpyCGt 21
                C  CGa  + dg  FC  CG 
  MMETSP1325-20131115|8349_1 46 CQSCGAlAVADGFEFCGVCGQ 66
                99****66679*********5 PP

>> PF05120.7  Gas vesicle protein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.8   0.00016      0.45      32      74 ..      81     123 ..      76     131 .. 0.75
   2 ?   -2.6   0.0       1.7   4.5e+03      45      55 ..     162     172 ..     159     178 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00016
   PF05120.7  32 nlrkeLaeLqleleaGeIseeeFdrrEeeLLdrlealkr.aeae 74 
                 ++ ++L++Lq  +e+  +s ee++++ + +L +l+ +++ ++ e
  MMETSP1325-20131115|8349_1  81 TIAQKLLNLQADFEEHALSSEEYEEQKK-MLFQLQLAENkRKRE 123
                 6899********************9965.666677444323333 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.7
   PF05120.7  45 eaGeIseeeFd 55 
                 ++G ++e++F+
  MMETSP1325-20131115|8349_1 162 DKGILDEAQFE 172
                 67889999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       555  (0.0405939); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.49
# Mc/sec: 1075.92
//
Query:       MMETSP1325-20131115|8348_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-77  257.9   0.2    5.9e-77  257.4   0.2    1.2  1  PF00448.17 SRP54-type protein, GTPase domain
    9.3e-14   51.1   2.2    1.8e-13   50.3   1.5    1.5  1  PF02881.14 SRP54-type protein, helical bundle domain
      1e-08   34.7   0.2    3.5e-08   32.9   0.1    1.9  1  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
    1.1e-07   31.6   0.0    2.4e-07   30.6   0.0    1.5  1  PF13671.1  AAA domain
    4.2e-06   26.3   0.1    9.4e-06   25.2   0.1    1.6  1  PF13604.1  AAA domain
    1.3e-05   25.2   0.0    9.7e-05   22.3   0.0    2.1  2  PF13401.1  AAA domain
    1.4e-05   24.2   0.1    2.1e-05   23.6   0.1    1.3  1  PF06414.7  Zeta toxin
    4.4e-05   23.0   0.1    0.00012   21.7   0.0    1.7  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
    0.00081   20.0   0.0     0.0017   19.0   0.0    1.6  1  PF13207.1  AAA domain
    0.00094   18.5   0.1      0.004   16.4   0.0    1.9  1  PF01656.18 CobQ/CobB/MinD/ParA nucleotide binding domain
     0.0012   17.5   1.0      0.022   13.4   0.7    2.2  1  PF03308.11 ArgK protein
     0.0013   18.5   0.0     0.0036   17.1   0.0    1.7  1  PF01926.18 50S ribosome-binding GTPase
     0.0016   18.2   0.0          2    8.2   0.0    2.4  2  PF13614.1  AAA domain
     0.0036   16.8   0.0     0.0068   15.9   0.0    1.4  1  PF01583.15 Adenylylsulphate kinase
     0.0051   17.1   0.2      0.018   15.4   0.1    1.9  1  PF08477.8  Miro-like protein
     0.0099   13.2   1.8       0.21    8.7   0.2    2.0  2  PF02514.11 CobN/Magnesium Chelatase
  ------ inclusion threshold ------
      0.012   14.7   1.5        1.5    7.8   0.0    2.5  3  PF09439.5  Signal recognition particle receptor beta subunit
      0.012   15.8   0.0       0.03   14.5   0.0    1.7  1  PF13191.1  AAA ATPase domain
      0.013   15.1   0.0      0.045   13.3   0.0    1.9  1  PF13245.1  Part of AAA domain
      0.013   15.3   0.2      0.034   13.9   0.1    1.8  1  PF13521.1  AAA domain
      0.013   14.4   1.0      0.016   14.1   0.1    1.7  2  PF01591.13 6-phosphofructo-2-kinase
      0.014   14.7   0.3        3.8    6.8   0.0    2.3  2  PF10662.4  Ethanolamine utilisation - propanediol utilisation
      0.014   14.5   0.1        0.1   11.7   0.0    2.2  2  PF00025.16 ADP-ribosylation factor family
      0.019   14.6   0.4      0.055   13.1   0.2    1.7  1  PF04851.10 Type III restriction enzyme, res subunit
      0.052   13.6   0.7       0.22   11.5   0.1    2.4  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
       0.06   12.0   0.6       0.13   11.0   0.0    1.8  2  PF00931.17 NB-ARC domain
      0.061   11.8   0.1       0.14   10.6   0.0    1.6  2  PF00465.14 Iron-containing alcohol dehydrogenase
       0.11   12.1   1.4          2    7.9   1.0    2.4  1  PF03266.10 NTPase


Domain annotation for each model (and alignments):
>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.4   0.2   1.2e-79   5.9e-77       1     193 [.     130     322 .]     130     322 .] 0.99

  Alignments for each domain:
  == domain 1    score: 257.4 bits;  conditional E-value: 1.2e-79
                 SEEEEEE-------TTTHHHHHHHHHHT---EEEEE--TSSHHHHHHHHHHHHHTT-EEEE-SS--EHHHHHHHHHHHHHHTT-SEEEEE----GTTCHHHHHHHHHHHHHSSSSEEEEEEETTS-HCHHHHHHHHHHHS---EEEEESTTT-S----HHHHHHHTT--EEEEE----CCGCEE--HHHHHHH CS
  PF00448.17   1 pnvillvGlqGaGKTTtlaKLAallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvikekeekdpaavakeavekakeekidvvlvDTaGrlqndkelmeelkkikkvlkpdevllvldatigqealkqakaFkeaveltgviltklDgdakgGaalsiaaelklPikfigvGekiedleefdperlvsr 193
                 pnvi++vGlqGaGKTTt+aK A++++++g k+++v+aDtfRa+A++QLk++a+kl+vp++++++e+dp+++a+++ve++++ek++v++vDT+Gr++++++l+ee+++i+++++pd+++++ldat gq++ +qa +F+eav++ +v++tklDg+akgG als++a++++Pi+f+g Gek +dle+f+++++vsr
  MMETSP1325-20131115|8348_1 130 PNVIMFVGLQGAGKTTTIAKYANYYNRKGFKTCMVCADTFRAGAYDQLKQNATKLRVPFYGSYTEADPVQIAQDGVEQFRAEKYEVIIVDTSGRHKQESALFEEMQEIREAVQPDNIVFILDATQGQAVQEQAASFHEAVDIGSVVITKLDGHAKGGGALSAVAATGAPIVFLGSGEKFDDLEPFNAQSFVSR 322
                 69*********************************************************************************************************************************************************************************************86 PP

>> PF02881.14  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   1.5   3.6e-16   1.8e-13       1      75 []      35     112 ..      35     112 .. 0.97

  Alignments for each domain:
  == domain 1    score: 50.3 bits;  conditional E-value: 3.6e-16
                 --------------..---------HHHHHHHHHHT----HHHHHHHHHHHHHHHH.....H-----TTT----HHHHH CS
  PF02881.14   1 LkkglsktrnkltgklfltekkidelleeleeaLleaDVgvevvkkliervreklvg....kkgvspkeeikkilkdeL 75 
                 L+++l+++ +kl++++ ++e+ ++ +l+++ +aLleaDV+v++ +++ ++++  +v+    + g + +++ik+++ deL
  MMETSP1325-20131115|8348_1  35 LGQKLENAMKKLSSATLVDEEVLNTMLNDISRALLEADVNVKLCMQMKNSIKT-RVNleesPAGSDRRKLIKRAVIDEL 112
                 799************99999999******************************.9999********************8 PP

>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.1   7.2e-11   3.5e-08       2     154 ..     132     282 ..     131     297 .. 0.72

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 7.2e-11
                 EEEEE-------HHHHHHHHC.HS---S-EEEEES-----HCCCCCHHT-S-.EEEE----ECC-TTS-HHH.HHCCCHHHCH-T-SEEEEE----SGGGGHHHH.SHHHHHHEEE-EEEEEEETTTHCHHHHHHHHHHHHHCT-SE..EEEE-CCCT CS
  PF02492.14   2 vtvltGflGsGKTtLleklle.knreglkiaVivndfgetkiDaellretgveivelnnGciCctlredllm.elealeelkeerldvlliEttGlaepapltft.eeelksdlgldavvtvvdvknltegedkpekledqlaaAdl..ivlnKiDll 154
                 v++++G  G+GKTt + k+ +  nr+g k++ +  d   ++   + l+++   + +l         ++d ++ + + +e+ ++e+++v+++ t+G  +  + +f+  +e+++ ++ d +v ++d+   t+g+  +e++ +  +a d+  +v++K D  
  MMETSP1325-20131115|8348_1 132 VIMFVGLQGAGKTTTIAKYANyYNRKGFKTCMVCADTFRAGA-YDQLKQN---ATKLRVPFYGSYTEADPVQiAQDGVEQFRAEKYEVIIVDTSGRHKQESALFEeMQEIREAVQPDNIVFILDA---TQGQAVQEQAASFHEAVDIgsVVITKLDGH 282
                 7899******************999***********995554.4445555...33444443333334454440445566666689**********666666657779******************...666666666665555555444788999965 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   4.8e-10   2.4e-07       1      87 [.     132     229 ..     132     263 .. 0.72

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 4.8e-10
   PF13671.1   1 lvllvGlpGsGKstlaerl...lkklg..yvrlsqdtlrkrlfgtdqqskt........dytrvlkrlyqilnklarkalsagrsvivdatnlsreerar 87 
                 ++++vGl+G+GK+t + ++   +++ g  ++ +++dt+r   + + +q+ t        +yt++     qi ++ +++ +++++ vi+  t  ++++ + 
  MMETSP1325-20131115|8348_1 132 VIMFVGLQGAGKTTTIAKYanyYNRKGfkTCMVCADTFRAGAYDQLKQNATklrvpfygSYTEAD--PVQIAQDGVEQFRAEKYEVIIVDTSGRHKQESA 229
                 89*************888733245555999**********9999888877766677443355543..56788899**********999777666544322 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   1.9e-08   9.4e-06      19     145 ..     131     268 ..     120     280 .. 0.69

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 1.9e-08
   PF13604.1  19 rvavvqGpAGtGKttvlkalrealeaag.krvvglAptgka..akvLeeelg......iearTiasllerldkeeaegrkeldaktllvvDEAgmvdtrq..larlleaaek.agakvvlvGDteQlqavea.Ggvfrll 145
                  v + +G  G+GKtt+++ ++++++++g k+ +++A t +a   ++L++++         + T a  ++  +++   ++ + ++ ++++vD +g   ++   ++++ e+ e+ +   +v++ D+ Q qav++  + f+++
  MMETSP1325-20131115|8348_1 131 NVIMFVGLQGAGKTTTIAKYANYYNRKGfKTCMVCADTFRAgaYDQLKQNATklrvpfYGSYTEADPVQIAQDGV--EQFRAEKYEVIIVDTSGRHKQESalFEEMQEIREAvQPDNIVFILDATQGQAVQEqAASFHEA 268
                 466777**********************99999999987752167899984444455433444444444333322..223378888********9877541145665555554446899999********8745556555 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       1.4   7.1e+02      73     117 ..      33      73 ..      17      88 .. 0.58
   2 !   22.3   0.0     2e-07   9.7e-05       4     121 ..     130     250 ..     125     258 .. 0.74

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 1.4
   PF13401.1  73 eellealqealrrrrtrlliiDEaqrLseealeel.rsllddetgv 117
                 +el ++l++a+++ +    ++DE      ++l+++ r ll+  ++v
  MMETSP1325-20131115|8348_1  33 QELGQKLENAMKKLSS-ATLVDEEVL--NTMLNDIsRALLE--ADV 73 
                 4455555555555555.555555444..5666666433333..343 PP

  == domain 2    score: 22.3 bits;  conditional E-value: 2e-07
   PF13401.1   4 agilvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapast.spkellqkllsalglpakgrltteellealqealrrrrt...rlliiDEaqrLs.....eealeelrsllddetgvklvl 121
                  ++++++G  G+GKTt++ ++a+ ++++       +++ v a      + + l++ + +l +p  g+ t+++ ++  q+ +++ r    +++i+D   r +     +e + e+r  ++   ++ ++l
  MMETSP1325-20131115|8348_1 130 PNVIMFVGLQGAGKTTTIAKYANYYNRK-----GFKTCMVCADTFRaGAYDQLKQNATKLRVPFYGSYTEADPVQIAQDGVEQFRAekyEVIIVDTSGRHKqesalFEEMQEIREAVQ-PDNIVFIL 250
                 678999*****************99766.....88888888888886666668888889998888866666666666655555555555******99997335456777777777666.77777776 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.1   4.4e-08   2.1e-05      11     107 ..     125     226 ..     117     262 .. 0.80

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 4.4e-08
   PF06414.7  11 peqekpkavllgGqpGAGKtslaellleela..agnivridaDelrkyhpayrelek...k.dpkeaseltqkdaselveklidralekgyniil.egtlrspd 107
                  ++ kp +++ +G +GAGKt+++ +  + ++  + ++  + aD++r     y++l +   k +   + ++t++d  ++++  +++  +++y +i+ ++  r+ +
  MMETSP1325-20131115|8348_1 125 MKKGKPNVIMFVGLQGAGKTTTIAKYANYYNrkGFKTCMVCADTFRAGA--YDQLKQnatKlRVPFYGSYTEADPVQIAQDGVEQFRAEKYEVIIvDTSGRHKQ 226
                 45589*************************977777899*******975..77776655545888999***********************9875155555444 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   2.4e-07   0.00012       2      34 ..     132     164 ..     131     171 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 2.4e-07
                 EEEEE-------HHHHHHHHHHHHH-------E CS
   PF03205.9   2 ivavvGpkdsGKTtlieklvnklkergyrvavv 34 
                 ++++vG ++ GKTt+i k +n+  ++g + ++v
  MMETSP1325-20131115|8348_1 132 VIMFVGLQGAGKTTTIAKYANYYNRKGFKTCMV 164
                 79**************************99976 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   3.4e-06    0.0017       1      78 [.     132     225 ..     132     270 .. 0.61

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 3.4e-06
                 EE--B--TT---HHHHHHHHHHS...TEE..EEEGGGB-........-GGGS-B--.---B...--SSGGGB-HHHHHHHH....H..HHHHHH....T CS
   PF13207.1   1 viaitGppGsGKsTlakeLaerl...glp..vlslddll........reeglkeld.dger...eskdadadllaaildglaakkdtlswvidg....a 78 
                 vi ++G  G+GK+T   + a+++   g++  ++  d+++        +  ++  ++ +g +   +  ++ +d ++++ ++      ++++++d     +
  MMETSP1325-20131115|8348_1 132 VIMFVGLQGAGKTTTIAKYANYYnrkGFKtcMVCADTFRagaydqlkQNATKLRVPfYGSYteaDPVQIAQDGVEQFRAEK-----YEVIIVDTsgrhK 225
                 799********************5555664457888842444455431122223333333333344777777777776666.....7777777743331 PP

>> PF01656.18  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   8.2e-06     0.004       9     159 ..     140     280 ..     133     288 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 8.2e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF01656.18   9 GvGKTtlaanLaralakrglrVlliDlDpqannssllgkvseilkkgeekasal.lenfeagllaegeeglvesllkkalealikeayDvviiDtapglgel.........vanalqaadllvvviepekfs.vegakrilellerlgkklkilgvvlnkvd 159
                 G+GKTt+ a  a + +++g+++ ++ +     +++  g  +++lk++ +k +     ++++ ++++         +++ +e++++e+y+v+i+Dt +              +++a+q  +++++    ++ +  e a  + e+++       i +vv++k+d
  MMETSP1325-20131115|8348_1 140 GAGKTTTIAKYANYYNRKGFKTCMVCA-----DTFRAG-AYDQLKQNATKLRVPfYGSYTEADPVQ--------IAQDGVEQFRAEKYEVIIVDTSGRHKQEsalfeemqeIREAVQPDNIVFILDATQGQAvQEQAASFHEAVD-------IGSVVITKLD 280
                 89*********************7755.....333333.368777666555544733444444444........35667999***************999999999999999999998888766444444441555555555555.......5577777774 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.7   4.5e-05     0.022      24     178 ..     125     280 ..     119     295 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.5e-05
                 GG----EEE--B-------HHHHHH---HHHH----EEEEEE-------------------TTTT-TTEEEEEE---------HHHHHHHHHHHHH----EEEEE------HHHHHHTT-.........SS-EEEE---------------TTT-SE..EEE---- CS
  PF03308.11  24 pkaGralvvGltGvPGaGkstlveklikelrrrGkrvavlavDPsspftGGsilGDrlRlerlavdegvfiRslasrGalGGlakktreviklldaaGfDvilvetvGvGqsevdiieva.........dtvvlvtlpgaGDelqaikaGlleiaDi..lvvnkaD 178
                  k G+ +v+ + G  GaGk t++ k ++   r+G +  ++  D   +f  G+   D+l+  + a++  v +  + ++       + +++ ++ + a  ++vi+v+t G  + e ++ e +         d +v ++ + +G  +q   a   e  Di  +v+ k D
  MMETSP1325-20131115|8348_1 125 MKKGKPNVIMFVGLQGAGKTTTIAKYANYYNRKGFKTCMVCAD---TFRAGAY--DQLK--QNATKLRVPFYGSYTEAD---PVQIAQDGVEQFRAEKYEVIIVDTSGRHKQESALFEEMqeireavqpDNIVFILDATQGQAVQEQAASFHEAVDIgsVVITKLD 280
                 578999********************************99988...5777774..5544..333444443333333333...345566777777888888888888887777665433211111112335667777777777777777777777777555666666 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   7.3e-06    0.0036       2      90 ..     133     258 ..     132     281 .. 0.55

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 7.3e-06
                 EEEE--TT---HHHHHHHHC...STCTE.............ETS-TT-SSSESEEEE...................ETTE.......EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS...H CS
  PF01926.18   2 vaivGrpNvGKStLinaLtg...ekaak.............vsdypgtTrditenev...................kkek.......iilvDtPGiiegasedkeiegikkylekveradvlllvvdasa...v 90 
                 +++vG+  +GK+t i +  +   +   k              ++y +  ++ t+ +v                   +  +       +i+vDt G    ++e+   e+++++ e+v+  d +++++da++   v
  MMETSP1325-20131115|8348_1 133 IMFVGLQGAGKTTTIAKYANyynR---KgfktcmvcadtfrAGAYDQLKQNATKLRVpfygsyteadpvqiaqdgvE--QfraekyeVIIVDTSGRH--KQESALFEEMQEIREAVQP-DNIVFILDATQgqaV 258
                 799***************963331...12223333333333444444444442211133344455555555544430..1334445569******43..3333334555555566544.778999997663321 PP

>> PF13614.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0058       2.8       2      42 ..     132     171 ..     131     184 .. 0.87
   2 !    8.2   0.0    0.0041         2     113     144 ..     207     237 ..     190     246 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0058
   PF13614.1   2 vigvySpvggegkttlAlnlaqslaenrkkvLlldleeysg 42 
                 vi++++  +g+gktt  +  a +  +++ k++ + ++ ++ 
  MMETSP1325-20131115|8348_1 132 VIMFVG-LQGAGKTTTIAKYANYYNRKGFKTCMVCADTFRA 171
                 899999.9*************************99998876 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0041
   PF13614.1 113 rlke.rYdvvilDlgslldedfallllklcdev 144
                 + ++ +Y+v+i+D+++ ++++ a  l+++++e+
  MMETSP1325-20131115|8348_1 207 QFRAeKYEVIIVDTSGRHKQESA--LFEEMQEI 237
                 55666****************99..99998887 PP

>> PF01583.15  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.4e-05    0.0068       2      52 ..     130     180 ..     129     185 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.4e-05
                 --EEEEE-ETT---HHHHHHHHHHHHCTS--EEEE---TTT----TT---- CS
  PF01583.15   2 gvvvwltGlsgsGKstiavalekkLvekgikvylLdGdnvRhgLnkdLgfs 52 
                 + v+++ Gl g+GK+t   + +++ ++kg k+ ++  d+ R g + +L ++
  MMETSP1325-20131115|8348_1 130 PNVIMFVGLQGAGKTTTIAKYANYYNRKGFKTCMVCADTFRAGAYDQLKQN 180
                 679************99999999*******************999888765 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   3.6e-05     0.018       2      95 ..     133     261 ..     132     280 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.6e-05
   PF08477.8   2 vvvvGdkgvGKssllsqlvgeefp........................kkklpeeikgdtlavktlevdvdtel........lelwdlggr.....eelkkehell.lkkadaillvydltdeesleevsel 95 
                 ++ vG +g+GK++ +++++   +                           kl+ ++ g+ +  + +++  d+          +++ d++gr     + +++++e+    + d i++++d t+++ ++e   +
  MMETSP1325-20131115|8348_1 133 IMFVGLQGAGKTTTIAKYANYYNRkgfktcmvcadtfragaydqlkqnATKLRVPFYGSYTEADPVQIAQDGVEqfraekyeVIIVDTSGRhkqesALFEEMQEIReAVQPDNIVFILDATQGQAVQE---Q 261
                 6789***************8888899*******************9996666666666666666444444433344555557999***99988865344444444478899***********997666...3 PP

>> PF02514.11  CobN/Magnesium Chelatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1      0.01       5.1     487     552 ..      20      85 ..      18     128 .. 0.79
   2 !    8.7   0.2   0.00044      0.21      66     158 ..     176     269 ..     120     280 .. 0.68

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.01
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02514.11 487 idHltPpltraglygelaeLeelideYeeaeeldesrkeelkeeIielaeelgldedlelsskeee 552
                  ++ tPp++   l++  ++Le+++++ + a+  de+  +++ ++I   + e++++ +l ++ k++ 
  MMETSP1325-20131115|8348_1  20 CSWRTPPVEAMVLQELGQKLENAMKKLSSATLVDEEVLNTMLNDISRALLEADVNVKLCMQMKNSI 85 
                 5788***************************99************999999999999855555444 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00044
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02514.11  66 dydeeaptvgilfyrshllsgntavvdaliralesrglnvipvfvssdaelaeaveellaad.geekvdalinltsfslvggpaekavellkel 158
                 + +++a +  + fy s++ ++  ++++  +++++++ ++vi+v +s++++ ++a+ e +++  ++ ++d ++ +     ++  +e+a+++ +++
  MMETSP1325-20131115|8348_1 176 QLKQNATKLRVPFYGSYTEADPVQIAQDGVEQFRAEKYEVIIVDTSGRHKQESALFEEMQEIrEAVQPDNIVFILDATQGQAVQEQAASFHEAV 269
                 246689999***********************************99955555553333332235566665555444444444444444444444 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       6.5   3.2e+03      50      72 ..      65      87 ..      36      92 .. 0.57
   2 ?    5.5   0.0     0.016       7.7       4      26 ..     131     153 ..     128     190 .. 0.72
   3 ?    7.8   0.0    0.0031       1.5      46      98 ..     210     265 ..     191     278 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 6.5
                --EEEE----GGGGHHHHHHHHH CS
   PF09439.5 50 kltliDfPGheklrqklleklka 72
                + +l++   ++kl +++++++k+
  MMETSP1325-20131115|8348_1 65 SRALLEADVNVKLCMQMKNSIKT 87
                34444444455555666555555 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.016
                 -EEEEE--TT---HHHHHHHHHS CS
   PF09439.5   4 pavllvGlsdsGKTslftrLttd 26 
                 + +++vGl+ +GKT+ + +  + 
  MMETSP1325-20131115|8348_1 131 NVIMFVGLQGAGKTTTIAKYANY 153
                 67899*********998876654 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0031
                 .-----EEEE----GGGGHHHHHHHHHHGG.B-..--EEEEETTS-TT--HHHHHH CS
   PF09439.5  46 ekgkkltliDfPGheklrqklleklkakss.lk..glvfvvDStidpkevkevAEl 98 
                  ++ ++ ++D  G +k  + l+e++++ ++ ++   +vf++D+t  +   ++ A +
  MMETSP1325-20131115|8348_1 210 AEKYEVIIVDTSGRHKQESALFEEMQEIREaVQpdNIVFILDATQGQAVQEQAASF 265
                 4677899***************99887776443338******99766544444444 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   6.2e-05      0.03      21     143 ..     127     258 ..     102     269 .. 0.60

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 6.2e-05
   PF13191.1  21 egsp.lllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrnlpysaiiqa............lrellrqlltelaaelggwreallaalga..............lipelegiiglqalvalldaalartrrpklvlvlD..Dlqwa 143
                  g p ++ ++G +G GK++ + + a    ++++  +    d + +  +y  + q              ++   q++                                      + ++  ++al+++++++ +  + +++v++lD  + q  
  MMETSP1325-20131115|8348_1 127 KGKPnVIMFVGLQGAGKTTTIAKYANYYNRKGFKTCMVCADTFRAG-AYDQLKQNatklrvpfygsyTEADPVQIA-------------------QdgveqfraekyeviIVDTSGRHKQESALFEEMQEIREAVQPDNIVFILDatQGQAV 258
                 56667899***************66666666665555555555554.34444444444444433332222222222...................233333333333332222334555556788888888888886569999994444444 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.2e-05     0.045      17      56 ..     137     173 ..     124     192 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 9.2e-05
   PF13245.1  17 GgPGtGKTttlaaiiaallaarekpgrsvllvaptgraak 56 
                 G  G+GKTtt+a+ ++++ +   k+ + ++++a t ra +
  MMETSP1325-20131115|8348_1 137 GLQGAGKTTTIAKYANYYNR---KGFKTCMVCADTFRAGA 173
                 777*****999999999874...33346999988888765 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1     7e-05     0.034       2      83 ..     133     223 ..     132     283 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 7e-05
   PF13521.1   2 ivitGgpstGKTtlleaLaar....gyp...vvpEvarevleeklakgeealpwe.e......dllafaeavleaqleqeaaaaaskllfcDrgll 83 
                 i+++G +++GKTt++++ a++    g++   v +++ r    ++l+++  +l+   +      d++++a+      +eq++a ++ +++++D++  
  MMETSP1325-20131115|8348_1 133 IMFVGLQGAGKTTTIAKYANYynrkGFKtcmVCADTFRAGAYDQLKQNATKLRVPfYgsyteaDPVQIAQD----GVEQFRA-EKYEVIIVDTSGR 223
                 7899***************76666766654344************99999998543244443366666554....4555555.5788999999865 PP

>> PF01591.13  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.8   1.9e+03      74     101 ..      50      77 ..      38     108 .. 0.70
   2 ?   14.1   0.1   3.4e-05     0.016       6      58 ..     123     180 ..     118     254 .. 0.78

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 3.8
  PF01591.13  74 lklreklalaalkdllkylneeegqvai 101
                 + + e++  ++l+d+ + l e + +v +
  MMETSP1325-20131115|8348_1  50 TLVDEEVLNTMLNDISRALLEADVNVKL 77 
                 5566777778888888888877776655 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 3.4e-05
  PF01591.13   6 vknlknsklvivlvGLpargKtyiskkltrylkwlgvrtkv.....Fnvgkyrreavk 58 
                 ++ +k ++ vi++vGL   gKt++ +k   y +  g++t +     F +g y + +++
  MMETSP1325-20131115|8348_1 123 YQMKKGKPNVIMFVGLQGAGKTTTIAKYANYYNRKGFKTCMvcadtFRAGAYDQLKQN 180
                 5666788999***********************7777765411111555555444444 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.016       7.6       4      18 ..     133     147 ..     130     169 .. 0.82
   2 ?    6.8   0.0    0.0078       3.8      39     102 ..     216     282 ..     198     301 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.016
   PF10662.4   4 illiGkvgaGKTtLt 18 
                 i+++G  gaGKTt  
  MMETSP1325-20131115|8348_1 133 IMFVGLQGAGKTTTI 147
                 9**********9965 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0078
   PF10662.4  39 eviDtPGeYlenrrlysalivt..aadadvialvqdateeesvfppgfaslfnkpviG..iiTkidla 102
                  ++Dt G + ++  l + ++ +  a++ d i++++dat+ + v +++ as+ +   iG  +iTk+d  
  MMETSP1325-20131115|8348_1 216 IIVDTSGRHKQESALFEEMQEIreAVQPDNIVFILDATQGQAV-QEQAASFHEAVDIGsvVITKLDGH 282
                 458*******9999999997643499***********987765.555566666666777789999965 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0    0.0002       0.1      12      36 ..     128     152 ..     120     170 .. 0.82
   2 ?   -0.4   0.0         1   5.1e+02      83     106 ..     244     267 ..     206     274 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.0002
                 TSEEEEEEE--TT---HHHHHHHHH CS
  PF00025.16  12 kkelrilllGLDnaGKtTilkklkl 36 
                  k   i+++GL +aGKtT + k+ +
  MMETSP1325-20131115|8348_1 128 GKPNVIMFVGLQGAGKTTTIAKYAN 152
                 5666799************999876 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 1
                 CEEEEEEETT-CTTHHHHHHHHHH CS
  PF00025.16  83 davifvvDsadreRleeakeeLka 106
                 d ++f++D+++ + ++e  + +++
  MMETSP1325-20131115|8348_1 244 DNIVFILDATQGQAVQEQAASFHE 267
                 678888888888877777766665 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   0.00011     0.055      18     146 ..     124     244 ..     119     256 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 0.00011
  PF04851.10  18 siekedekkrglivmaTGtGKTlvaasliarlar...kflflv...prkelleqaleefkkfeskkiefekkniavakkdklfgeeqkkskdkeekkkkdkeiilttiqklhkaleeeeend.esksesleallde 146
                 +++k+ + + +++v   G+GKT ++a+ + ++ r   k+ +++    r   ++q++++        +++   +++  ++ ++++  q+ +++   + ++++e+i++  +  hk+     ++  e+++e +ea +  
  MMETSP1325-20131115|8348_1 124 QMKKG-KPNVIMFVGLQGAGKTTTIAKYANYYNRkgfKTCMVCadtFRAGAYDQLKQNA-------TKLRVPFYGSYTEADPVQIAQDGVEQ---FRAEKYEVIIVDTSGRHKQE----SALfEEMQEIREAVQPD 244
                 56677.778899***************77777779**7777775555677888888777.......22222333333444443334444433...44445555555555555442....22334444444444445 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       5.1   2.5e+03      77      95 ..      48      66 ..      29      79 .. 0.66
   2 ?   11.5   0.1   0.00045      0.22       1     110 [.     133     253 ..     133     317 .. 0.57

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 5.1
                ..TTHCHHHHHHHHHHHHH CS
  PF00004.24 77 seseeeervvnqLlteldg 95
                s++ ++e+v+n++l+ +++
  MMETSP1325-20131115|8348_1 48 SATLVDEEVLNTMLNDISR 66
                4455667777777776665 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00045
                 EEEE-------HHHHHHHHHHCT...HEEEEEECCSSSSS...T-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH.......SS..TTHCHHHHHHHHHHHHHTTTT..S.TEEEEEE-S CS
  PF00004.24   1 vllyGppGtGKTllakavakelg...vefleisgsellsk...yvgesekkirelfkeakekakpsilfiDEidalaksr.......sgseseeeervvnqLlteldgvkkk..eskvivigatn 110
                 ++++G  G GKT+++   a+  +   ++ + + + +++      +++++ k+r  f    ++a+p+ +  D ++++  ++       +    + + +  ++L++e+++ ++    +++++i+ ++
  MMETSP1325-20131115|8348_1 133 IMFVGLQGAGKTTTIAKYANYYNrkgFKTCMVCADTFRAGaydQLKQNATKLRVPFYGSYTEADPVQIAQDGVEQFRAEKyeviivdT----SGRHKQESALFEEMQEIREAvqPDNIVFILDAT 253
                 689******************8533355566666666533455344444444444444333334444444555544444444422222....222222333333333333322223455554444 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       6.6   3.2e+03      81      92 ..      46      62 ..      29      78 .. 0.44
   2 ?   11.0   0.0   0.00026      0.13      16     109 ..     127     252 ..     119     277 .. 0.73

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 6.6
                X.....-TTSS-HHHHH CS
  PF00931.17 81 v.....svekneselkr 92
                       +e++ +++ +
  MMETSP1325-20131115|8348_1 46 LssatlVDEEVLNTMLN 62
                12222223333333333 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00026
                 TSSSEEEEEE-------HHHHHHHTS-SS-----SEEEEEE-----SSHHHHHHHHHHHXXXXXXX....................................-TTSS-HHHHHHHHHHTTT-SEEEEEEE CS
  PF00931.17  16 eeelkvvglvGmgGvGKttlakqvykdesveshFdvvawvkvsktakefdlqkdilkeLgkededv....................................svekneselkrklkelLkrkrfLlvLDD 109
                 + + +v+ +vG  G GKtt++++  +    ++ F  ++ + ++  a ++d +k+ +++L+     +                                    ++e    e  ++++e+++  +++++LD 
  MMETSP1325-20131115|8348_1 127 KGKPNVIMFVGLQGAGKTTTIAKYANY-YNRKGFKTCMVCADTFRAGAYDQLKQNATKLRVP---FygsyteadpvqiaqdgveqfraekyeviivdtsgrhKQESALFEEMQEIREAVQPDNIVFILDA 252
                 367899************998887766.4678899999999988888888777777777766...22335677888888888888888888888888877666666666677788888888888888885 PP

>> PF00465.14  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       3.7   1.8e+03      14      52 ..      35      75 ..      29      84 .. 0.48
   2 ?   10.6   0.0   0.00028      0.14       6      83 ..     139     217 ..     137     218 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 3.7
                HHHHHTTT.S...EEEEEEEHHHHHTHHHHHHH...HC---EE CS
  PF00465.14 14 lgeelkkl.g...kvlivtdkslkklglldkvlesLeeagiev 52
                lg++l+++ +   ++ +v  + l++  +l+++  +L ea+++v
  MMETSP1325-20131115|8348_1 35 LGQKLENAmKklsSATLVDEEVLNT--MLNDISRALLEADVNV 75
                4444444432232555554444433..3555555555555555 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00028
                 E---GGGGHHHHHTTT..S..EEEEEEEHHHHHTHHHHHHH...HC---EEEEEE.E-----HHHHHHHHTTS-T.T--EEE CS
  PF00465.14   6 fgegaleelgeelkkl..g..kvlivtdkslkklglldkvlesLeeagievtvfdgvepeptleeveeaaalareekadviv 83 
                 +g+g+ + + +++  +  +  k+++v+     ++g++d++++  ++ +++v  ++ +++  +++  +++++++r+ek++vi+
  MMETSP1325-20131115|8348_1 139 QGAGKTTTIAKYANYYnrKgfKTCMVCAD-TFRAGAYDQLKQ--NATKLRVPFYGSYTEADPVQIAQDGVEQFRAEKYEVII 217
                 67788888888777775426988888844.35789******9..669999999****************************8 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.0    0.0041         2       4      39 ..     135     170 ..     132     278 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0041
                 EE-------HHHHHHHHHH-...---EE--EEE--- CS
  PF03266.10   4 iTGepgvGKtTlvkkvlellksegvkvgGfyteevr 39 
                   G +g GKtT + k ++  +++g+k + + +   r
  MMETSP1325-20131115|8348_1 135 FVGLQGAGKTTTIAKYANYYNRKGFKTCMVCADTFR 170
                 56889*************999988877644444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       885  (0.0647308); expected 273.4 (0.02)
Passed bias filter:                      696  (0.050907); expected 273.4 (0.02)
Passed Vit filter:                       115  (0.00841135); expected 13.7 (0.001)
Passed Fwd filter:                        28  (0.00204798); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.99u 0.29s 00:00:01.28 Elapsed: 00:00:00.46
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|8347_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-06   26.9   1.4    2.6e-06   26.9   1.0    1.8  2  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       0.5   6.9e+03       4      13 ..     185     194 ..     185     195 .. 0.81
   2 !   26.9   1.0   1.9e-10   2.6e-06       2      37 .]     254     289 ..     253     289 .. 0.93

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 0.5
                 HHHHHHHH-- CS
  PF00627.26   4 eaiqqLreMG 13 
                 +++q+L++ G
  MMETSP1325-20131115|8347_1 185 QDLQELLDTG 194
                 5799999987 PP

  == domain 2    score: 26.9 bits;  conditional E-value: 1.9e-10
                 THHHHHHHHH----HHHHHHHHHHTTTSHHHHHHHH CS
  PF00627.26   2 deeaiqqLreMGfsreeakkALratnnnvErAveyL 37 
                 ++++  +L +MGf r e+  AL ++n+n+  A + L
  MMETSP1325-20131115|8347_1 254 YAAQANRLTDMGFQRAECEAALNKHNGNEANALNEL 289
                 688999**************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.37s 00:00:00.93 Elapsed: 00:00:01.07
# Mc/sec: 656.20
//
Query:       MMETSP1325-20131115|8353_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 792.26
//
Query:       MMETSP1325-20131115|8355_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       502  (0.0367174); expected 273.4 (0.02)
Passed bias filter:                      473  (0.0345963); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 540.36
//
Query:       MMETSP1325-20131115|8354_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-18   65.5   0.4    5.2e-09   35.9   0.0    3.8  4  PF13857.1  Ankyrin repeats (many copies)
    2.6e-17   62.8   0.7    5.9e-17   61.6   0.2    1.8  2  PF12796.2  Ankyrin repeats (3 copies)
    2.1e-15   55.5   0.1    8.3e-07   28.4   0.0    3.6  3  PF00023.25 Ankyrin repeat
    2.4e-12   46.9   0.0    0.00041   20.6   0.0    2.7  3  PF13637.1  Ankyrin repeats (many copies)
    4.8e-11   41.6   0.1    0.00016   21.4   0.0    3.9  4  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
        1.1    7.0   7.6        1.3    6.7   5.3    1.1  1  PF11847.3  Domain of unknown function (DUF3367)
        1.5    8.7  13.2        2.9    7.8   9.1    1.5  1  PF06112.6  Gammaherpesvirus capsid protein
          2    8.1   8.3        3.4    7.4   5.7    1.4  1  PF06679.7  Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00057      0.97      20      41 ..      48      69 ..      46      71 .. 0.90
   2 !   22.0   0.0     7e-08   0.00012       6      49 ..      67     109 ..      63     110 .. 0.88
   3 !   35.9   0.0     3e-12   5.2e-09       7      53 ..     100     146 ..      96     149 .. 0.93
   4 ?   -1.8   0.0       2.3   3.8e+03      12      23 ..     183     194 ..     180     197 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00057
   PF13857.1 20 LhlAakggalevvrlLlapgad 41
                +hlA+k+g+l++v + l+ ++d
  MMETSP1325-20131115|8354_1 48 FHLACKRGDLDAVTKALDENVD 69
                5****************88887 PP

  == domain 2    score: 22.0 bits;  conditional E-value: 7e-08
   PF13857.1   6 padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdg 49 
                 ++dv + d++g+t LhlA k+g+++vv +L+  +++l+ +d +g
  MMETSP1325-20131115|8354_1  67 NVDVESADRNGVTGLHLASKYGRTTVVGKLI-GRCNLDQQDDEG 109
                 59999**************************.888888888877 PP

  == domain 3    score: 35.9 bits;  conditional E-value: 3e-12
   PF13857.1   7 advnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53 
                  +++++d +g t+Lh+A k++ levv++L ++g+d  + d++g+ta 
  MMETSP1325-20131115|8354_1 100 CNLDQQDDEGLTALHKATKYNKLEVVQMLMEAGCDVMAEDEWGETAA 146
                 68899****************************************96 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 2.3
   PF13857.1  12 tdeggntpLhlA 23 
                 t+++++tpL  A
  MMETSP1325-20131115|8354_1 183 TEPHKTTPLAPA 194
                 678999***887 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.2   3.5e-20   5.9e-17       2      88 ..      49     138 ..      48     139 .. 0.94
   2 ?   -1.6   0.0       1.9   3.2e+03      44      48 ..     157     164 ..     142     200 .. 0.48

  Alignments for each domain:
  == domain 1    score: 61.6 bits;  conditional E-value: 3.5e-20
   PF12796.2   2 hlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                 hlA+++g+l++v + l+++ dv+     g t LhlA+++g++ +v  L+ + ++++++d+eg t+Lh A ++++le+v++L+e+g+dv ++
  MMETSP1325-20131115|8354_1  49 HLACKRGDLDAVTKALDENVDVESadrnGVTGLHLASKYGRTTVVGKLIGR-CNLDQQDDEGLTALHKATKYNKLEVVQMLMEAGCDVMAE 138
                 9**********************99777777*******************8.8999*******************************9776 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.9
   PF12796.2  44 lLle...a 48 
                 +Ll+   +
  MMETSP1325-20131115|8354_1 157 ALLKhaiK 164
                 33332220 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0024         4       7      28 ..      49      70 ..      48      75 .. 0.78
   2 !   16.0   0.0   4.1e-06     0.007       1      33 []      76     107 ..      76     107 .. 0.94
   3 !   28.4   0.0   4.8e-10   8.3e-07       2      32 ..     109     139 ..     108     140 .. 0.95

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0024
                HHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25  7 HlAalrgnlevvklLlsqGAdl 28
                HlA++rg+l+ v+  l+ + d+
  MMETSP1325-20131115|8354_1 49 HLACKRGDLDAVTKALDENVDV 70
                **********998766666665 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 4.1e-06
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 +G T LHlA+++g++ vv  L++  ++l+ qdd
  MMETSP1325-20131115|8354_1  76 NGVTGLHLASKYGRTTVVGKLIG-RCNLDQQDD 107
                 79999******************.999999997 PP

  == domain 3    score: 28.4 bits;  conditional E-value: 4.8e-10
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G T+LH A +++ levv++L ++G+d+ a d
  MMETSP1325-20131115|8354_1 109 GLTALHKATKYNKLEVVQMLMEAGCDVMAED 139
                 99*************************9987 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   2.8e-07   0.00047       5      53 ..      48      96 ..      46      97 .. 0.93
   2 !   20.6   0.0   2.4e-07   0.00041      26      53 ..     101     128 ..      95     129 .. 0.92
   3 !   16.0   0.0     7e-06     0.012       1      41 [.     109     149 ..     109     158 .. 0.87

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 2.8e-07
   PF13637.1  5 LhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                +h a++ g+l++v   l+ ++d+   d++G t Lh+A ++g+  ++  L
  MMETSP1325-20131115|8354_1 48 FHLACKRGDLDAVTKALDENVDVESADRNGVTGLHLASKYGRTTVVGKL 96
                699**************************************99887655 PP

  == domain 2    score: 20.6 bits;  conditional E-value: 2.4e-07
   PF13637.1  26 dinrtdesGntaLhiAalrgnieilklL 53 
                 +++++d++G taLh+A +++ +e++++L
  MMETSP1325-20131115|8354_1 101 NLDQQDDEGLTALHKATKYNKLEVVQML 128
                 78899**********************9 PP

  == domain 3    score: 16.0 bits;  conditional E-value: 7e-06
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiA 41 
                 gltaLh+a +++ le+v+ L e g d+ + de G+ta  +A
  MMETSP1325-20131115|8354_1 109 GLTALHKATKYNKLEVVQMLMEAGCDVMAEDEWGETAATKA 149
                 58999999999999999999999999866699999998777 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0054       9.2       6      28 ..      48      70 ..      43      71 .. 0.85
   2 !    8.5   0.0    0.0014       2.4       1      22 [.      76      97 ..      76     103 .. 0.88
   3 !   21.4   0.0   9.4e-08   0.00016       2      28 ..     109     135 ..     108     137 .. 0.95
   4 ?   -1.3   0.0       2.1   3.6e+03      15      24 ..     152     161 ..     145     164 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0054
   PF13606.1  6 LhlAasngrielveaLlengadi 28
                +hlA+++g +++v   l+  +d+
  MMETSP1325-20131115|8354_1 48 FHLACKRGDLDAVTKALDENVDV 70
                7**********998888776665 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0014
   PF13606.1  1 nGnTpLhlAasngrielveaLl 22
                nG T LhlA ++gr+ +v  L+
  MMETSP1325-20131115|8354_1 76 NGVTGLHLASKYGRTTVVGKLI 97
                799**************98887 PP

  == domain 3    score: 21.4 bits;  conditional E-value: 9.4e-08
   PF13606.1   2 GnTpLhlAasngrielveaLlengadi 28 
                 G T+Lh A +++++e+v+ L e+g+d+
  MMETSP1325-20131115|8354_1 109 GLTALHKATKYNKLEVVQMLMEAGCDV 135
                 99************************8 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 2.1
   PF13606.1  15 ielveaLlen 24 
                  + veaLl++
  MMETSP1325-20131115|8354_1 152 GSEVEALLKH 161
                 5679999998 PP

>> PF11847.3  Domain of unknown function (DUF3367)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.3   0.00076       1.3     491     656 ..      72     237 ..      59     243 .] 0.62

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00076
   PF11847.3 491 rrLqtGtlsagladaLara.GvgyvvvRnDLeaeesrtprpalverale..rspgltkvaeFGeqveeqdvedalvdetlrprvpalevyevagggapkaatlvdadallvvsggpesllrlaaagllegdsgpvvltadaeeaklpvadvavtdgprarevdfgevea 656
                 ++  +G+   +la++  r   vg+++ R +L+++ +++   +++++a +  + + ++   e G +v ++d  +  ++++++   +  ++ + a + a  a++ ++++++  +s+ p ++  la a   + ++  + + a+ + a+ ++   a++++++ +++++g  ++
  MMETSP1325-20131115|8354_1  72 SADRNGVTGLHLASKYGRTtVVGKLIGRCNLDQQDDEGL--TALHKATKynKLEVVQMLMEAGCDVMAEDEWGETAATKAKRGSEVEALLKHAIKEAVIAMKEAPQQRAKKTSTEPHKTTPLAPASTTATATTTTAASAS-ASASASASVSASQATATDTDTNEGGATD 237
                 5555677777888888888789**********9775555..5566665332555666667789888888884433333333223333344445556677778899999**************999888885433333333.2222222223455555555555555444 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   9.1    0.0017       2.9      82     144 ..     174     233 ..     147     236 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0017
   PF06112.6  82 petsssigsalsassssasgvpggaalSsssvsalsSgpsslsssssesssdasagdtapssk 144
                 p+++++++s    +   ++ +++ ++  +  +++++S ++s s+s s s+s+a+a+dt  +++
  MMETSP1325-20131115|8354_1 174 PQQRAKKTST---EPHKTTPLAPASTTATATTTTAASASASASASASVSASQATATDTDTNEG 233
                 3444444444...3333444444566777888899999999999999999****999988766 PP

>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.7     0.002       3.4      30      85 ..     170     227 ..     145     240 .. 0.68

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.002
   PF06679.7  30 lsea..esaassePeprtlsalpPgptpanptalleadakkGkasetssggalavsps 85 
                 ++ea  ++a++++ ep+++++l+P++t+a++t ++ a+a+    +++s+ ++ a+  +
  MMETSP1325-20131115|8354_1 170 MKEApqQRAKKTSTEPHKTTPLAPASTTATATTTTAASASASASASASVSASQATATD 227
                 334411456667889999*********9999998887776655556666555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1117  (0.0816998); expected 273.4 (0.02)
Passed bias filter:                      468  (0.0342305); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.63u 0.41s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1141.79
//
Query:       MMETSP1325-20131115|8356_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.9   1.5        0.2   11.7   1.0    1.1  1  PF12019.3 Type II transport protein GspH


Domain annotation for each model (and alignments):
>> PF12019.3  Type II transport protein GspH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.0   1.4e-05       0.2      12      94 ..      16      90 ..       7      97 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.4e-05
   PF12019.3 12 ARseAvkrgqpvtvcpssdggqc.ggdWssgwivfsdaddnnaerldadlallalpsgvtltlegeaggpsitFnpsGlastta 94
                 Rse v rg+   +++ ++g+      W+   +v+  + + ++       a + + +g +++ ++e   ++++++p G a+ t+
  MMETSP1325-20131115|8356_1 16 TRSEVVARGAHAVLRLGPNGQPGaPPPWQAEPWVAPAEYEQGEA------ASNDPDQGGAWANSNE--DAQVAMDPAGVAT-TG 90
                79999*************99887655599999999977776655......4447777777777777..9999999999993.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 469.69
//
Query:       MMETSP1325-20131115|8357_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-44  152.7   0.0    1.3e-44  152.6   0.0    1.0  1  PF00026.18 Eukaryotic aspartyl protease


Domain annotation for each model (and alignments):
>> PF00026.18  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.6   0.0   9.5e-49   1.3e-44      54     246 ..       2     194 ..       1     195 [] 0.95

  Alignments for each domain:
  == domain 1    score: 152.6 bits;  conditional E-value: 9.5e-49
                 E---B--EE-----EE-EEEEEEEE----EEEEEEEEEEEEE-HHHH..CCTS----B-E--GGG-S-B.---HHHHHHHC--CSSSEEEE---STT----EEE---BCCCEE-EEEEEEBC-SSS-EEEBEEEE----EEEEEEBEEEE-----SEEE-HHHHHHHHHHH--EETS...SEEEETTGG-GS-EEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx RF
  PF00026.18  54 kngksfsisYGdgsvsGflsqDtvklggltvkeqefgeatkepgstf..laakfdGilGlgfkeievgetatpvfdtllsqglidepvFsvylnsdaeggelvfGgvDeskykGsltyvpvtkkgywqvelesvtvgdktfcssgcqailDtGTsllalpesivekiakavgaaese..geyvvdCsslsslpdiaf 246
                 +ng++f+i+YG+g vsG++s+Dt+++g+ + ++  f+e++ ++g  +  +  kfdGi G+++  i+v++ +++  + l++ g ++e+vF++yl  +a  gel+ GgvDe++y+G+++yvp+++  yw+v l+s+ vg+k   s+  +ai+D+GTslla+p++ ve ia a+  a+++  gey+vdC+++ + pd++f
  MMETSP1325-20131115|8357_1   2 ANGTEFAIEYGSGPVSGYYSRDTMTIGEFKAENYLFAEVDDTSGLGLgwTLGKFDGICGMAWGMISVDG-VPTPLEALIATGDLEEEVFAFYLGDEA-DGELLIGGVDEAHYTGDFAYVPLSQLSYWEVALDSLLVGGKATGST-AKAIVDSGTSLLAGPTEDVEVIAAAIPSAKKNvaGEYIVDCDET-DAPDLTF 194
                 5899*************************************99877655899*****************.99***********************99.9****************************************77776.89************************99988889*********9.7777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 934.58
//
Query:       MMETSP1325-20131115|8358_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.098   12.5   0.1        0.1   12.4   0.1    1.2  1  PF08920.5 Splicing factor 3B subunit 1


Domain annotation for each model (and alignments):
>> PF08920.5  Splicing factor 3B subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.6e-06       0.1       6      71 ..       5      68 ..       1     110 [. 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.6e-06
   PF08920.5  6 kkkrsRWDetpakeaegvatpeentkkrsrwdktpeklgetpilseagmatpltpssvslqpedvi 71
                +kk sRW +++  ++++ ++  e  + + +++++  ++ +tp + +a++  p+ + s + +++dv 
  MMETSP1325-20131115|8358_1  5 TKKVSRWNKMS-GQRHDRNKAYESWQTTCEVNDAS-EERSTPAIATAAVFAPFSTVSLAAAASDVH 68
                69*********.45555555556777888887765.789999999999999988887654444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      376  (0.0275015); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 637.33
//
Query:       MMETSP1325-20131115|8361_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   17.8   0.1     0.0016   17.4   0.1    1.1  1  PF00884.18 Sulfatase


Domain annotation for each model (and alignments):
>> PF00884.18  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.1   1.2e-07    0.0016     287     378 ..       4     138 ..       2     139 .. 0.66

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.2e-07
                 EE-S-EEGGGHHHHHHHH---......--TTST-----THHHH----..........S.TT..CCEEE.EEEECTB.C.CCCCTS.CCCSCCCE.........................................EETTT-TCC-C CS
  PF00884.18 287 vseelvshvDlaptildlagilpk.vegpkdrlldgksllptlegka..........qaddlkavrll.nsraivkag.weavnldpadasgcs.........................................ydltaDpgelk 378
                  +++l +++D++pt++ ++g+  +  +  +   +dgk++++    ++                    + n+++ ++++  e+  +  + +s  s                                         +dlt+Dp e +
  MMETSP1325-20131115|8361_1   4 HVDTLFHAIDWLPTLAMATGA--VsDVSTELPGIDGKNMANEILHGKttsnerkellL---------HmNKWTENDEStLETMMFENSYMSLISiqdghqwkilfnqykadrvepthttfnlscfesigdpsnhlFDLTNDPLEEH 138
                 6788999**************..32344555679*****9988888754444444440.........44555543332123333333444444466666666666666666666777777788888888*************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 763.84
//
Query:       MMETSP1325-20131115|8363_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.64
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|8362_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.042   13.1   0.1      0.085   12.1   0.1    1.5  1  PF11623.3  Protein of unknown function (DUF3252)
       0.13   12.0   0.1       0.19   11.4   0.0    1.2  1  PF12829.2  Transcriptional regulation of mitochondrial recombination
        2.2    7.9   5.4         13    5.4   1.8    2.9  3  PF02272.14 DHHA1 domain


Domain annotation for each model (and alignments):
>> PF11623.3  Protein of unknown function (DUF3252)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.9e-05     0.085       2      35 ..      51      87 ..      50      94 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.9e-05
                ------EEE--TT...STTBT----EEEE----EEEE CS
   PF11623.3  2 ilPGatVkVknpn...diYygyeGlVQrvsdgkaaVL 35
                + PG +Vk+ n++     Yy+ +  V rv++ ++a+L
  MMETSP1325-20131115|8362_1 51 LHPGIVVKIMNKKvggGKYYKAKASVERVVERYVAIL 87
                67*********9744468*****************98 PP

>> PF12829.2  Transcriptional regulation of mitochondrial recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.1e-05      0.19      32      69 ..      28      70 ..      15      81 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.1e-05
   PF12829.2 32 qlqrpgkknk.....paklRkDlW.rpmavvefpeeeegvsvyq 69
                q +  +++       + + RkD+W +p +vv++ ++++g   y 
  MMETSP1325-20131115|8362_1 28 QQKASKQT-SdlaaeEKSSRKDYWlHPGIVVKIMNKKVGGGKYY 70
                22222222.1344558899*****7799****999999877765 PP

>> PF02272.14  DHHA1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   1.8    0.0028        13      39      50 ..       8      19 ..       3      28 .. 0.87
   2 ?    1.2   0.0     0.059   2.7e+02      25      54 ..      56      77 ..      52      90 .. 0.74
   3 ?   -1.0   0.0      0.28   1.3e+03      11      23 ..     133     145 ..     128     152 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0028
                --------SEE- CS
  PF02272.14 39 gGkGGGHadaAg 50
                gG+GGG+++ A+
  MMETSP1325-20131115|8362_1  8 GGGGGGRKMSAM 19
                78*******995 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.059
                -HH.HHHHH---TT--------SEE---BS CS
  PF02272.14 25 dvrgellreaaeklgGkGGGHadaAgasip 54
                +v+  ++++        GGG+ + A as++
  MMETSP1325-20131115|8362_1 56 VVK--IMNKK------VGGGKYYKAKASVE 77
                555..56665......68999888888775 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.28
                 ---BEEEEE---- CS
  PF02272.14  11 dgkikvsaRsskk 23 
                  +  +vs+R++++
  MMETSP1325-20131115|8362_1 133 VDDFNVSLRVTEG 145
                 5677899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       826  (0.0604154); expected 273.4 (0.02)
Passed bias filter:                      669  (0.0489321); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 859.56
//
Query:       MMETSP1325-20131115|8359_1  [L=447]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.42s 00:00:01.13 Elapsed: 00:00:00.51
# Mc/sec: 2100.34
//
Query:       MMETSP1325-20131115|8366_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-15   55.6   3.5    1.2e-08   34.2   0.1    2.2  2  PF13414.1  TPR repeat
    2.3e-13   48.9   4.4    8.8e-05   21.8   0.1    3.3  3  PF00515.23 Tetratricopeptide repeat
    3.8e-10   38.7   2.9     0.0074   16.0   0.0    3.3  3  PF07719.12 Tetratricopeptide repeat
      9e-08   31.8   0.3    0.00095   18.9   0.0    2.3  2  PF13424.1  Tetratricopeptide repeat
    1.5e-05   24.3   2.5      0.084   12.5   0.1    3.4  3  PF13181.1  Tetratricopeptide repeat
    1.5e-05   24.7   1.2     0.0034   17.3   0.1    3.0  3  PF13431.1  Tetratricopeptide repeat
      0.006   16.5   2.7      0.011   15.7   1.6    1.6  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
  ------ inclusion threshold ------
      0.011   15.5   0.0       0.19   11.5   0.0    2.7  3  PF13374.1  Tetratricopeptide repeat
      0.012   15.3   3.2        2.5    7.9   0.0    3.3  3  PF04212.13 MIT (microtubule interacting and transport) domain
      0.017   15.6   0.2       0.24   11.9   0.1    2.3  2  PF13432.1  Tetratricopeptide repeat
      0.028   14.9   0.0        1.2    9.8   0.0    2.9  3  PF13428.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.1     1e-11   1.2e-08      10      68 ..       3      75 ..       1      76 [. 0.82
   2 !   28.6   0.3   5.7e-10   7.1e-07      24      66 ..      66     107 ..      60     109 .. 0.90

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 1e-11
   PF13414.1 10 GnalfkegdydeAieayekAle.......ldpnnae........lyynlAlaylklgkdyeeAledyekAleld 68
                G +lfk ++y  A +ay++Al        l+p++ e        ly+nlAl++ kl ++++++ +++++Al++d
  MMETSP1325-20131115|8366_1  3 GTELFKGKNYIHATKAYKEALThcshffdLSPEDQEevngvkltLYNNLALCWTKL-DNFDQVFKCASEALAID 75
                7778888888888888888885222222277988889******************9.79*************99 PP

  == domain 2    score: 28.6 bits;  conditional E-value: 5.7e-10
   PF13414.1  24 eayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66 
                 ++ ++Al++d++n ++++++A +y+k+  +y+ A++d+++A++
  MMETSP1325-20131115|8366_1  66 KCASEALAIDEKNSKALFRRATVYEKRK-QYDLAMADIKLAMK 107
                 7889**********************85.8**********997 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0    0.0003      0.37       8      33 ..       3      28 ..       2      29 .. 0.88
   2 !   21.8   0.1   7.1e-08   8.8e-05       3      34 .]      47      78 ..      46      78 .. 0.96
   3 !   17.5   0.1   1.6e-06     0.002       2      27 ..      80     105 ..      79     108 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0003
                HHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  8 GnaylklgkydeAleyyekALelnPn 33
                G  ++k ++y  A ++y++AL++  +
  MMETSP1325-20131115|8366_1  3 GTELFKGKNYIHATKAYKEALTHCSH 28
                6779999**************98765 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 7.1e-08
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  3 alynlGnaylklgkydeAleyyekALelnPnn 34
                 ++nl+++  kl ++d+  ++ ++AL ++++n
  MMETSP1325-20131115|8366_1 47 LYNNLALCWTKLDNFDQVFKCASEALAIDEKN 78
                59***************************987 PP

  == domain 3    score: 17.5 bits;  conditional E-value: 1.6e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekA 27 
                 kal++++ +y k ++yd A ++ + A
  MMETSP1325-20131115|8366_1  80 KALFRRATVYEKRKQYDLAMADIKLA 105
                 8*******************998766 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0013       1.6      10      31 ..       5      26 ..       2      29 .. 0.86
   2 !   16.0   0.0     6e-06    0.0074       3      34 .]      47      78 ..      46      78 .. 0.95
   3 !   13.2   0.1   4.4e-05     0.055       2      28 ..      80     106 ..      79     108 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0013
                HHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12 10 ayyklgdyeeAleafekAleld 31
                 ++k ++y  A +a+++Al ++
  MMETSP1325-20131115|8366_1  5 ELFKGKNYIHATKAYKEALTHC 26
                58999**************876 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 6e-06
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldPnn 34
                +++nl+l++ kl+++++  ++  +Al++d +n
  MMETSP1325-20131115|8366_1 47 LYNNLALCWTKLDNFDQVFKCASEALAIDEKN 78
                69***************************986 PP

  == domain 3    score: 13.2 bits;  conditional E-value: 4.4e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAl 28 
                 +al++++ +y+k+++y+ A ++ + A 
  MMETSP1325-20131115|8366_1  80 KALFRRATVYEKRKQYDLAMADIKLAM 106
                 79*****************99887775 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   7.7e-07   0.00095      17      78 .]      15      77 ..       6      77 .. 0.89
   2 !   11.2   0.0    0.0002      0.24       7      45 ..      81     119 ..      78     143 .. 0.80

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 7.7e-07
   PF13424.1 17 rlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78
                + + y+eAl+++ +  +l  + + + ++  ++++nnla ++ +l ++d+  ++  +Al+i+ek
  MMETSP1325-20131115|8366_1 15 ATKAYKEALTHCSHFFDLsPEDQEEVNGVKLTLYNNLALCWTKLDNFDQVFKCASEALAIDEK 77
                7788999***********888888888888******************************986 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.0002
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdt 45 
                 +l++ a+v+++ ++yd A + ++ a++  +  gd ++ t
  MMETSP1325-20131115|8366_1  81 ALFRRATVYEKRKQYDLAMADIKLAMKQPAGEGDKNLAT 119
                 78999********************99965666555444 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.025        31      15      29 ..      10      24 ..       3      26 .. 0.85
   2 ?    5.7   0.0      0.01        13       3      32 ..      47      76 ..      45      79 .. 0.84
   3 !   12.5   0.1   6.7e-05     0.084       2      27 ..      80     105 ..      79     107 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.025
                T-HHHHHHHHH---H CS
   PF13181.1 15 GdydkAkeylekale 29
                ++y  A +++++al 
  MMETSP1325-20131115|8366_1 10 KNYIHATKAYKEALT 24
                78999********95 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.01
                -TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekalelkp 32
                +y+nl+++  +l ++d+  ++  +al ++ 
  MMETSP1325-20131115|8366_1 47 LYNNLALCWTKLDNFDQVFKCASEALAIDE 76
                79**************98888888887776 PP

  == domain 3    score: 12.5 bits;  conditional E-value: 6.7e-05
                 --TTT---HHHHTT-HHHHHHHHH-- CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeyleka 27 
                 ka+++++ +Y++ ++yd+A++  + a
  MMETSP1325-20131115|8366_1  80 KALFRRATVYEKRKQYDLAMADIKLA 105
                 799*****************987766 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       3.1   3.8e+03       2      12 ..      19      29 ..      18      38 .. 0.68
   2 ?    5.0   0.0     0.024        30      15      30 ..      47      62 ..      39      64 .. 0.88
   3 !   17.3   0.1   2.7e-06    0.0034       3      32 ..      69      98 ..      67     100 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 3.1
   PF13431.1  2 yekaleldPnn 12
                y++al ++   
  MMETSP1325-20131115|8366_1 19 YKEALTHCSHF 29
                78887776554 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.024
   PF13431.1 15 aynnLAelllnnGdle 30
                +ynnLA+++ ++ +++
  MMETSP1325-20131115|8366_1 47 LYNNLALCWTKLDNFD 62
                7********9998876 PP

  == domain 3    score: 17.3 bits;  conditional E-value: 2.7e-06
   PF13431.1  3 ekaleldPnnadaynnLAelllnnGdleeA 32
                 +al++d +n+ a++++A+++ ++++++ A
  MMETSP1325-20131115|8366_1 69 SEALAIDEKNSKALFRRATVYEKRKQYDLA 98
                68*************************987 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   1.6     9e-06     0.011       3      78 ..      17      99 ..      15     103 .. 0.87
   2 !    9.4   0.4   0.00083         1       4      48 ..      60     102 ..      57     130 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 9e-06
                T-HHHHHHHHHHHCCC-ST-HHHH.....CHHH.HHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHC CS
   PF12895.2  3 hnyknAlflaekllaespkdpeda.....ylya.lAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAi 78
                ++yk+Al ++   + +sp+d+e +      ly+ lAlc  ++ ++++ ++  ++ l +d+++ ++ +  A +++k ++yd A 
  MMETSP1325-20131115|8366_1 17 KAYKEALTHCSHFFDLSPEDQEEVngvklTLYNnLALCWTKLDNFDQVFKCASEaLAIDEKNSKALFRRATVYEKRKQYDLAM 99
                78****************85544467777777789*****************99*99999998888888**********9886 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00083
                 -HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHH CS
   PF12895.2   4 nyknAlflaekllaespkdpedaylyalAlclylngeykrAyell 48 
                 n+++  ++a ++la +    ++ +l++ A ++ + ++y+ A+  +
  MMETSP1325-20131115|8366_1  60 NFDQVFKCASEALAIDE--KNSKALFRRATVYEKRKQYDLAMADI 102
                 67778889999999986..37899999************998876 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.78   9.7e+02      13      31 ..       7      25 ..       3      27 .. 0.68
   2 ?   11.5   0.0   0.00015      0.19       3      34 ..      46      77 ..      45      77 .. 0.92
   3 ?   -0.6   0.1         1   1.3e+03       9      21 ..      86      98 ..      85     100 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.78
   PF13374.1 13 rargryeeAlaleeealai 31
                ++ ++y  A + + eal++
  MMETSP1325-20131115|8366_1  7 FKGKNYIHATKAYKEALTH 25
                6666677777777777765 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00015
   PF13374.1  3 aalnnLAlalrargryeeAlaleeealairrr 34
                + +nnLAl   +++++++  + + ealai ++
  MMETSP1325-20131115|8366_1 46 TLYNNLALCWTKLDNFDQVFKCASEALAIDEK 77
                679*************************9775 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 1
   PF13374.1  9 AlalrargryeeA 21
                A ++ +r++y+ A
  MMETSP1325-20131115|8366_1 86 ATVYEKRKQYDLA 98
                789999***9976 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0     0.002       2.5      19      47 ..      10      38 ..       3      43 .. 0.87
   2 ?    5.4   0.3     0.012        15       6      21 ..      65      80 ..      60     100 .. 0.64
   3 ?   -2.0   0.0       2.5   3.1e+03      43      43 ..     130     130 ..     104     142 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.002
                T-HHHHHHHHHHHHHHHHHHHHHCTTHHC CS
  PF04212.13 19 gkyeeAlelYkeAlelLlqalkyepnper 47
                ++y  A ++YkeAl ++ ++    p+++ 
  MMETSP1325-20131115|8366_1 10 KNYIHATKAYKEALTHCSHFFDLSPEDQE 38
                68999***************999887765 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.012
                HHHHHHHHHHHHTT-H CS
  PF04212.13  6 lelikkAveaDeagky 21
                ++++++A+ +De++ +
  MMETSP1325-20131115|8366_1 65 FKCASEALAIDEKNSK 80
                6777777777776543 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 2.5
                 T CS
  PF04212.13  43 p 43 
                 +
  MMETSP1325-20131115|8366_1 130 K 130
                 2 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.33   4.1e+02      13      28 ..      19      34 ..       2      64 .. 0.61
   2 ?   11.9   0.1   0.00019      0.24      19      53 ..      67     101 ..      66     112 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.33
   PF13432.1 13 ydeAlaaleaalalaP 28
                y+eAl + +++ +l P
  MMETSP1325-20131115|8366_1 19 YKEALTHCSHFFDLSP 34
                5555555555555554 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 0.00019
   PF13432.1  19 aleaalalaPeaaeallllaeallrlgrldeAaal 53 
                 + ++ala + ++  al+++a ++ +++++d A a 
  MMETSP1325-20131115|8366_1  67 CASEALAIDEKNSKALFRRATVYEKRKQYDLAMAD 101
                 56789999999*******************99765 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       2.2   2.7e+03      20      31 ..      15      26 ..       6      38 .. 0.66
   2 ?    9.8   0.0   0.00095       1.2       4      43 ..      48      87 ..      45      88 .. 0.89
   3 ?    5.7   0.1      0.02        25       2      22 ..      80     100 ..      79     110 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 2.2
   PF13428.1 20 Aiallrralala 31
                A +++++al ++
  MMETSP1325-20131115|8366_1 15 ATKAYKEALTHC 26
                667777777654 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00095
   PF13428.1  4 llalarallalGdpdeAiallrralalaPddaealllLar 43
                +  la     l ++d+  +++ +ala + ++  al++ a 
  MMETSP1325-20131115|8366_1 48 YNNLALCWTKLDNFDQVFKCASEALAIDEKNSKALFRRAT 87
                66788888999***********************999885 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.02
   PF13428.1   2 eallalarallalGdpdeAia 22 
                 +al ++a +++ + ++d A+a
  MMETSP1325-20131115|8366_1  80 KALFRRATVYEKRKQYDLAMA 100
                 5899*************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       506  (0.0370099); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|8368_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      4e-12   45.7   0.0    6.7e-12   45.0   0.0    1.4  1  PF04934.9 MED6 mediator sub complex component


Domain annotation for each model (and alignments):
>> PF04934.9  MED6 mediator sub complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   4.9e-16   6.7e-12      14     100 ..      25      98 ..      13      99 .] 0.88

  Alignments for each domain:
  == domain 1    score: 45.0 bits;  conditional E-value: 4.9e-16
   PF04934.9  14 lneenvLdYFaespFydktsnNevlkmqrqfnqlqeklatrealeeelkkmtgieyvlahv..repdlfvirKqrrrsetevtpladYy 100
                 l e  v++YF  spFy++ +nNe l+ ++ + +              l++m g eyv+  +    p+l+vir q+r s ++++ l+ Yy
  MMETSP1325-20131115|8368_1  25 LTEVGVMNYFRGSPFYSRSCNNERLQINEGAAA--------------LESMMGPEYVVDRSmsSPPHLWVIRYQWRSS-SQISLLKLYY 98 
                 56778********************99988888..............**********988755889**********97.8999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|8367_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-06   26.8   3.8     0.0014   18.3   0.0    3.6  3  PF01436.16 NHL repeat
  ------ inclusion threshold ------
       0.04   13.1   0.1      0.059   12.6   0.1    1.3  1  PF13379.1  NMT1-like family


Domain annotation for each model (and alignments):
>> PF01436.16  NHL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.3     0.003        21      12      26 ..      42      59 ..      32      61 .. 0.78
   2 !   18.3   0.0   2.1e-07    0.0014       1      25 [.      87     112 ..      87     115 .. 0.95
   3 ?    2.4   0.0     0.022   1.5e+02      16      28 .]     161     177 ..     159     177 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.003
                T--EEEEE...GCCTEEE CS
  PF01436.16 12 dGdvyVaD...senhrvq 26
                dG v+V+D     n+rv+
  MMETSP1325-20131115|8367_1 42 DGAVWVSDgdgGVNNRVV 59
                8*******9997777776 PP

  == domain 2    score: 18.3 bits;  conditional E-value: 2.1e-07
                 -SSBEEEEE-.TT--EEEEEGCCTEE CS
  PF01436.16   1 lnnPhGvavd.sdGdvyVaDsenhrv 25 
                 +++Ph++a+  ++ +++VaD+ n r+
  MMETSP1325-20131115|8367_1  87 FSSPHSIAYHdPSRSLLVADRDNYRI 112
                 899********************998 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.022
                 EEEE....GCCTEEEEE CS
  PF01436.16  16 yVaD....senhrvqvf 28 
                  VaD     +n r++v+
  MMETSP1325-20131115|8367_1 161 AVADtpqdGGNQRIVVL 177
                 567766669*****996 PP

>> PF13379.1  NMT1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   8.6e-06     0.059      26      63 ..      10      47 ..       3      67 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 8.6e-06
   PF13379.1 26 ekglfekeGltvellkqaswaelrdkllagelDaahvl 63
                  g+  keG +v++l++ s a++ + +++g lD+a ++
  MMETSP1325-20131115|8367_1 10 SAGTPGKEGHDVDVLQFGSTADVATGVAGGALDGAVWV 47
                45666699***************************994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 943.87
//
Query:       MMETSP1325-20131115|8369_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|8365_1  [L=554]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-06   27.4   0.0    3.6e-06   26.3   0.0    1.6  1  PF01553.16 Acyltransferase
  ------ inclusion threshold ------
      0.034   13.7   0.0      0.082   12.5   0.0    1.6  1  PF08196.6  UL2 protein


Domain annotation for each model (and alignments):
>> PF01553.16  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   5.2e-10   3.6e-06       8     106 ..     215     338 ..     205     368 .. 0.71

  Alignments for each domain:
  == domain 1    score: 26.3 bits;  conditional E-value: 5.2e-10
  PF01553.16   8 enlpekgpaivvaNHqsylDvlllwlllyksnpenvviiakkellsipllgflmrnlgc.ifidRksnkraagslenise..llregklviiFPEGtrsrs......................g 106
                 e+ ++ g+a+v++NH s++D+l+ +++ y   + +v ++ +  ++++pl+g+  + ++   f++R+ ++++    ++i e    + + ++ ++PEG +                         +
  MMETSP1325-20131115|8365_1 215 EKAKATGRALVLSNHGSRIDWLIGMFAGYSGTNIRVGFVCEWLVKYLPLIGWYRNFVNQdTFVNRSFESDKPRIEKRIDEfhNSNTDMMLFLAPEGACVDHnemamkyindcqkfaaaqgykpF 338
                 5556699*******************9999889********************9966544999**5555555555555556455555669999***8888744555555555555555555551 PP

>> PF08196.6  UL2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.2e-05     0.082      26      47 ..      41      64 ..      35      72 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.2e-05
   PF08196.6 26 ashaqysfrvlrGiflvtlv..vW 47
                a+ a  +frvlrG+ +v+lv  vW
  MMETSP1325-20131115|8365_1 41 ATPASTTFRVLRGLNYVALVafVW 64
                6678889************93344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.36s 00:00:01.23 Elapsed: 00:00:00.53
# Mc/sec: 2504.87
//
Query:       MMETSP1325-20131115|8370_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 1109.62
//
Query:       MMETSP1325-20131115|8374_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   25.4   0.1       0.03   14.8   0.0    2.9  3  PF13428.1  Tetratricopeptide repeat
     0.0014   18.3   9.8        0.1   12.3   1.0    2.9  3  PF00397.21 WW domain
     0.0057   16.1   0.1      0.021   14.3   0.0    1.9  2  PF00515.23 Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.02   14.3   0.0      0.059   12.9   0.0    1.8  2  PF13414.1  TPR repeat
      0.024   14.7   0.2        1.8    8.8   0.0    2.9  4  PF13431.1  Tetratricopeptide repeat
      0.031   14.8   0.0      0.062   13.8   0.0    1.5  1  PF13432.1  Tetratricopeptide repeat
       0.04   14.2   0.2       0.11   12.8   0.1    1.8  1  PF13174.1  Tetratricopeptide repeat
      0.056   13.2   1.3        0.1   12.4   0.2    2.0  2  PF07719.12 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0     0.006        10      20      44 .]      14      39 ..       7      39 .. 0.83
   2 !   14.8   0.0   1.7e-05      0.03      15      38 ..      45      68 ..      41      71 .. 0.87
   3 ?   -0.6   0.0       1.6   2.7e+03      31      43 ..     138     151 ..     123     152 .. 0.63

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.006
   PF13428.1 20 Aia.llrralalaPddaealllLarl 44
                A++ l+ +a+ ++P+++ all++a l
  MMETSP1325-20131115|8374_1 14 AEDsLFHWAVVTCPTNPKALLNYAVL 39
                55647999***************975 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 1.7e-05
   PF13428.1 15 GdpdeAiallrralalaPddaeal 38
                 d+d A++ +rrala aPdd  + 
  MMETSP1325-20131115|8374_1 45 KDFDLAEKFYRRALAEAPDDRYVV 68
                59*****************97665 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 1.6
   PF13428.1  31 aPddaeal.llLar 43 
                  Pd +ea+ ++L+r
  MMETSP1325-20131115|8374_1 138 EPDWDEAWqIRLGR 151
                 47655666588876 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.6   7.9e+03       4       9 ..     108     114 ..     107     119 .. 0.60
   2 !   10.5   0.3   0.00022      0.37      16      31 .]     124     139 ..     123     139 .. 0.92
   3 !   12.3   1.0   5.9e-05       0.1       4      24 ..     160     180 ..     158     181 .. 0.87

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 4.6
                 SEE.E.E CS
  PF00397.21   4 gWe.ers 9  
                 +W+ +++
  MMETSP1325-20131115|8374_1 108 EWQmMVD 114
                 4995544 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00022
                 EEEEETTT--EESS-- CS
  PF00397.21  16 vYYyNheTgetqWekP 31 
                 +++yN +T+ t We P
  MMETSP1325-20131115|8374_1 124 HFWYNRITQLTKWEEP 139
                 589***********88 PP

  == domain 3    score: 12.3 bits;  conditional E-value: 5.9e-05
                 SEEE.E.E-.---EEEEETTT- CS
  PF00397.21   4 gWeersddd.dGrvYYyNheTg 24 
                 +W+e++ d+    ++YyN +T 
  MMETSP1325-20131115|8374_1 160 QWKEYW-DSgLKCTFYYNESTD 180
                 5*****.6999********995 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.2e-05     0.021      15      34 .]      45      64 ..      41      64 .. 0.93
   2 ?   -2.5   0.0       2.4   4.1e+03       4      14 ..     126     136 ..     125     140 .. 0.66

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-05
                T-HHHHHHHHHHHHHHHTTH CS
  PF00515.23 15 gkydeAleyyekALelnPnn 34
                +++d A+++y++AL   P++
  MMETSP1325-20131115|8374_1 45 KDFDLAEKFYRRALAEAPDD 64
                89**************9996 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 2.4
                 HHHHHHHHHHT CS
  PF00515.23   4 lynlGnaylkl 14 
                 +yn+   + k 
  MMETSP1325-20131115|8374_1 126 WYNRITQLTKW 136
                 99986666655 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.5e-05     0.059      33      69 .]      26      62 ..      17      64 .. 0.90
   2 ?   -2.6   0.0       2.3   3.9e+03      25      32 ..     126     133 ..     116     147 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.5e-05
   PF13414.1 33 dpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                +p n+++++n A + +   kd++ A + y++Al+ +P
  MMETSP1325-20131115|8374_1 26 CPTNPKALLNYAVLMQGVVKDFDLAEKFYRRALAEAP 62
                799*************9999*************9776 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 2.3
   PF13414.1  25 ayekAlel 32 
                  y++ ++l
  MMETSP1325-20131115|8374_1 126 WYNRITQL 133
                 34444443 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0    0.0011       1.8       8      32 ..      25      50 ..      22      52 .. 0.75
   2 ?    2.8   0.0      0.09   1.5e+02       1      12 [.      53      64 ..      53      71 .. 0.78
   3 ?   -3.6   0.0         8   1.4e+04      12      18 ..     122     128 ..     118     133 .. 0.68
   4 ?   -2.8   0.0       5.4   9.2e+03      10      21 ..     139     151 ..     137     162 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0011
   PF13431.1  8 ldPnnadaynnLAelll.nnGdleeA 32
                 +P+n+ a+ n+A+l +   +d++ A
  MMETSP1325-20131115|8374_1 25 TCPTNPKALLNYAVLMQgVVKDFDLA 50
                58************987445666655 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.09
   PF13431.1  1 lyekaleldPnn 12
                +y++al+ +P++
  MMETSP1325-20131115|8374_1 53 FYRRALAEAPDD 64
                6*********98 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 8
   PF13431.1  12 nadaynn 18 
                  a +++n
  MMETSP1325-20131115|8374_1 122 FAHFWYN 128
                 5667777 PP

  == domain 4    score: -2.8 bits;  conditional E-value: 5.4
   PF13431.1  10 Pnnadayn.nLAe 21 
                 P+  +a++ +L++
  MMETSP1325-20131115|8374_1 139 PDWDEAWQiRLGR 151
                 5566666645554 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   3.6e-05     0.062      30      64 ..      29      64 ..       9      65 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.6e-05
   PF13432.1 30 aaeallllaeall.rlgrldeAaallraalalaPdd 64
                ++ all++a++     +++d A++++r+ala+aPdd
  MMETSP1325-20131115|8374_1 29 NPKALLNYAVLMQgVVKDFDLAEKFYRRALAEAPDD 64
                677899999999966699999999999999999997 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   6.4e-05      0.11       2      32 ..      32      63 ..      31      64 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.4e-05
                HHHHHHHHHHH.HHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  2 Alyklalsyyk.lgdtdeAlealerlikeyPd 32
                Al+++a +++   +d+d A + ++r ++e Pd
  MMETSP1325-20131115|8374_1 32 ALLNYAVLMQGvVKDFDLAEKFYRRALAEAPD 63
                9*********988******************9 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   6.1e-05       0.1      15      34 .]      45      64 ..      44      64 .. 0.94
   2 ?   -3.1   0.0       5.5   9.3e+03      20      26 ..     123     129 ..     116     133 .. 0.61

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 6.1e-05
                T-HHHHHHHHHHHHHH-TTS CS
  PF07719.12 15 gdyeeAleafekAleldPnn 34
                +d++ A++++++Al+ +P++
  MMETSP1325-20131115|8374_1 45 KDFDLAEKFYRRALAEAPDD 64
                69****************97 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 5.5
                 HHHHHHH CS
  PF07719.12  20 Aleafek 26 
                 A+ ++++
  MMETSP1325-20131115|8374_1 123 AHFWYNR 129
                 4444544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 909.64
//
Query:       MMETSP1325-20131115|8371_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.34s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 1547.65
//
Query:       MMETSP1325-20131115|8371_2  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 1543.25
//
Query:       MMETSP1325-20131115|8373_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-20   73.0   0.0    3.4e-20   72.4   0.0    1.3  1  PF00005.22 ABC transporter
      6e-05   22.2   0.0    7.3e-05   21.9   0.0    1.2  1  PF02463.14 RecF/RecN/SMC N terminal domain
     0.0055   16.4   4.6      0.027   14.2   0.5    3.4  3  PF13558.1  Putative exonuclease SbcCD, C subunit
  ------ inclusion threshold ------
      0.047   12.1   0.0      0.086   11.2   0.0    1.3  1  PF09818.4  Predicted ATPase of the ABC class
       0.17   11.7   0.0       0.23   11.2   0.0    1.2  1  PF13304.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.4   0.0   1.2e-23   3.4e-20       7     118 .]       2     122 ..       1     122 [. 0.93

  Alignments for each domain:
  == domain 1    score: 72.4 bits;  conditional E-value: 1.2e-23
                 HTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--..........----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   7 ltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk..........srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 l + ++ +eg+i +d+   ++++ +  +l+  +g + q+p lf  ++v++n+ ++ + + +d+++ e++++ + +++++           +r+  LSgGqkqr+a+Arall +p++llLDE+t+
  MMETSP1325-20131115|8373_1   2 LERFYDVDEGRILIDG--VEIKDLDPLWLHdnVGLVLQEPVLF-GMSVKDNITYGLSREVSDTEVVEACKQANAHDFVQGfpekyatmvgERGMRLSGGQKQRLAIARALLVNPRILLLDEATS 122
                 66788999*******4..46777666677779***********.**************99*******************9******************************************96 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   2.7e-08   7.3e-05     136     209 ..      93     162 ..      14     170 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 2.7e-08
                 G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadklv 209
                  LSgG+k+ +a+a  +    v+p+ + llDe  +aLD++  + v + +++       i++++r +++++adk+v
  MMETSP1325-20131115|8373_1  93 RLSGGQKQRLAIARAL---LVNPR-ILLLDEATSALDAESEHVVQDAIDKLMVGRTTIIVAHRLSTVRNADKIV 162
                 69*****988887553...35555.779*******************************************987 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.5   9.9e-06     0.027      33      88 ..      94     136 ..      79     138 .. 0.73
   2 ?   -0.8   0.0      0.49   1.3e+03      63      88 ..     158     182 ..     148     184 .. 0.77
   3 ?   -0.4   0.1      0.35   9.7e+02      26      39 ..     189     202 ..     177     240 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 9.9e-06
   PF13558.1  33 lSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEAFsklDeeniasllell 88 
                 lSGG+kq        +A+a ++        ++r+++LDEA+s lD+e+   + +++
  MMETSP1325-20131115|8373_1  94 LSGGQKQ-------RLAIARALLV------NPRILLLDEATSALDAESEHVVQDAI 136
                 6666663.......3344444444......69***************987776665 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.49
   PF13558.1  63 sirlvfLDEAFsklDeeniasllell 88 
                 + ++v++D + + +De + ++l+  +
  MMETSP1325-20131115|8373_1 158 ADKIVVFDQG-AAVDEGTHDELMHRC 182
                 5578999999.999999999998755 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.35
   PF13558.1  26 lsrrtgtlSGGEkq 39 
                 ++r+t+++ GGE  
  MMETSP1325-20131115|8373_1 189 VKRQTDAGAGGEGT 202
                 67778888888873 PP

>> PF09818.4  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.1e-05     0.086     297     352 ..      67     123 ..      58     141 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.1e-05
   PF09818.4 297 vkgvdispFinnLPegkdtt.efstedASGStsqAanimealeagakllLiDEDtsA 352
                  k+++   F++  Pe++ t         SG  +q  +i++al ++ ++lL+DE tsA
  MMETSP1325-20131115|8373_1  67 CKQANAHDFVQGFPEKYATMvGERGMRLSGGQKQRLAIARALLVNPRILLLDEATSA 123
                 67788899*********99966666789****************************9 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.5e-05      0.23     236     273 ..      93     127 ..      85     149 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 8.5e-05
   PF13304.1 236 dlSdGtkrllalltallsalekgsvlliDEpEngLHPk 273
                 +lS G+k+ la++ all ++   ++ll+DE  + L+ +
  MMETSP1325-20131115|8373_1  93 RLSGGQKQRLAIARALLVNP---RILLLDEATSALDAE 127
                 58******************...********9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.41s 00:00:00.96 Elapsed: 00:00:00.53
# Mc/sec: 1107.75
//
Query:       MMETSP1325-20131115|8376_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.016   15.4   0.5      0.016   15.4   0.3    2.5  2  PF09177.6  Syntaxin 6, N-terminal
      0.026   14.1   5.7      0.056   13.0   1.8    2.2  2  PF01017.15 STAT protein, all-alpha domain
      0.033   14.3   8.0        8.2    6.6   1.6    3.4  3  PF00435.16 Spectrin repeat
       0.13   12.0   7.0        2.2    8.0   4.8    2.6  1  PF04871.8  Uso1 / p115 like vesicle tethering protein, C terminal region
       0.14   12.0   3.6        2.3    8.0   0.2    2.2  2  PF10392.4  Golgi transport complex subunit 5
       0.16   11.8   4.3       0.66    9.8   0.1    2.9  2  PF00170.16 bZIP transcription factor
       0.26   10.9   1.4        1.4    8.5   0.1    2.4  2  PF04758.9  Ribosomal protein S30
          2    8.4   6.8         11    6.0   1.7    2.9  2  PF02970.11 Tubulin binding cofactor A
        5.2    6.4  10.8         60    3.0   6.8    2.3  2  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.3     1e-05     0.016      46      97 .]      72     123 ..       4     123 .. 0.91
   2 ?    1.6   0.1      0.22   3.3e+02      10      50 ..     126     170 ..     121     181 .. 0.53

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1e-05
   PF09177.6  46 nalesiewdledLeeavsvveknpekfglseeeisrRkqfvaeireeikevk 97 
                 ++++++e +++ +e++v+++++ +e+f +  +  ++++qf+++++  ik v+
  MMETSP1325-20131115|8376_1  72 ETYNTLEDTYKFMEKEVNLINSISENFDAAMQSKASKEQFLKQFEGIIKGVE 123
                 5789*****************************************9999886 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.22
   PF09177.6  10 vqksidkleslyrsweelrsdst....sskelkeltkeLenales 50 
                 +q++ ++le  + ++e+l+ +++    ++++  ++ k++++++++
  MMETSP1325-20131115|8376_1 126 LQRQQATLEGKTVRLESLTANHQnlvdEQRRYFKAVKDFQEECNK 170
                 555555555555555555555444443334555666666666654 PP

>> PF01017.15  STAT protein, all-alpha domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.076   1.2e+02     144     171 ..       2      29 ..       1      37 [. 0.85
   2 ?   13.0   1.8   3.7e-05     0.056      11     120 ..      74     186 ..      64     187 .] 0.81

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.076
  PF01017.15 144 lkkleelrqkltyegdpitkqraelneq 171
                 +k++e++ +k+  + d++++ +ae+n  
  MMETSP1325-20131115|8376_1   2 IKEIEDMHVKVMAKYDKLRQLVAERNLA 29 
                 8999999999999999999999888755 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 3.7e-05
  PF01017.15  11 lealknsvqeveqdikkLedvqeefdfkyk....tlqslkeleanrnslkealkqekllleemls...kLdqkRkelvekmkellnlleslqselldeeLkeWKrrQqlaciGgppe 120
                  + l++  + +e++++ +++  e+fd  ++    + q lk++e   +  +++l++++++le       +L  + ++lv++ ++ ++ +++ q+e  ++e    + +Q la  Ggp e
  MMETSP1325-20131115|8376_1  74 YNTLEDTYKFMEKEVNLINSISENFDAAMQskasKEQFLKQFEGIIKGVEDSLQRQQATLEGKTVrleSLTANHQNLVDEQRRYFKAVKDFQEECNKNE----RYSQKLAQLGGPLE 186
                 56788889999***************9999666666667777867777888999999999976666889***********************5554444....78888888888876 PP

>> PF00435.16  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0074        11      76     101 ..       3      28 ..       1      32 [. 0.89
   2 ?    3.9   0.1     0.038        58      32      76 ..      63     108 ..      44     120 .. 0.79
   3 ?    6.6   1.6    0.0054       8.2      36      84 ..     119     167 ..     104     183 .. 0.63

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0074
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00435.16  76 eeieerleelnerWeeLlelaaerkq 101
                 +eie++  ++  ++++L++l+aer  
  MMETSP1325-20131115|8376_1   3 KEIEDMHVKVMAKYDKLRQLVAERNL 28 
                 78999999***************975 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.038
                 SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHTTSTTHH CS
  PF00435.16  32 dleevqallkkhkaleaelaaqqervealnelaekl.ideghsase 76 
                 +l e ++  +++ +le++ + ++++v+ +n ++e++ ++ + +as+
  MMETSP1325-20131115|8376_1  63 KLGENKKYFETYNTLEDTYKFMEKEVNLINSISENFdAAMQSKASK 108
                 6777888888999999999999********9999997666655543 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0054
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHH CS
  PF00435.16  36 vqallkkhkaleaelaaqqervealnelaeklideghsaseeieerlee 84 
                 ++  ++ +++ +a+l+ +  r+e+l++  ++l+de+    +++++ +ee
  MMETSP1325-20131115|8376_1 119 IKGVEDSLQRQQATLEGKTVRLESLTANHQNLVDEQRRYFKAVKDFQEE 167
                 3344446777777777777777777777777777765555555444444 PP

>> PF04871.8  Uso1 / p115 like vesicle tethering protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   4.8    0.0015       2.2      21     114 ..     101     185 ..      53     187 .] 0.74

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0015
   PF04871.8  21 etrlkadaensleqkekalekeekalkearltrkkeleksasttkeleaikekldeEalkesqkeqdDLLvlladqeeKvekykeklkelgvev 114
                   ++    ++s eq  k+ e  +k +++  + +++ le + + ++ l a  ++l  E      k   D    ++++ +K+e+y++kl +lg + 
  MMETSP1325-20131115|8376_1 101 AMQS----KASKEQFLKQFEGIIKGVEDSLQRQQATLEGKTVRLESLTANHQNLVDEQ-RRYFKAVKD----FQEECNKNERYSQKLAQLGGPL 185
                 3333....44444444444444666666444477779999999999999999999997.666677777....678889*************986 PP

>> PF10392.4  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.2    0.0015       2.3      76     132 .]       4      60 ..       1      60 [. 0.91
   2 ?    5.1   0.2     0.012        19      64     113 ..     102     151 ..      77     155 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0015
   PF10392.4  76 elksslesLsasyerlkskvlepyeeaeklqsalkrlhqtldLlrralrflhlskqL 132
                 e++    +++a y++l++ v e+   +  +++ +  + + ++L     rf+ l +q+
  MMETSP1325-20131115|8376_1   4 EIEDMHVKVMAKYDKLRQLVAERNLAIAAKVRLIDDIPTRTELIQYERRFVELYQQV 60 
                 6666667899*******************************************9995 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.012
   PF10392.4  64 lskskslssvlselksslesLsasyerlkskvlepyeeaeklqsalkrlh 113
                 +++++s+++ l++ ++ ++ ++ s++r +  +  +  ++e+l++  ++l 
  MMETSP1325-20131115|8376_1 102 MQSKASKEQFLKQFEGIIKGVEDSLQRQQATLEGKTVRLESLTANHQNLV 151
                 567778888***********************999999999999999986 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00043      0.66      27      63 ..      52      88 ..      49      89 .. 0.91
   2 ?    2.5   0.4     0.081   1.2e+02      25      57 ..     137     169 ..     124     176 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00043
                HHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHH CS
  PF00170.16 27 eieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                +  eL + v+ + +eNk++ ++ ++l+++++ +++ev
  MMETSP1325-20131115|8376_1 52 RFVELYQQVALKLGENKKYFETYNTLEDTYKFMEKEV 88
                667999************************9999886 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.081
                 HHHHHHHHHHHHHHHHHH.......HHHHHHHH CS
  PF00170.16  25 kaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                   ++e L+   ++L  e +++ k ++  ++e+ 
  MMETSP1325-20131115|8376_1 137 TVRLESLTANHQNLVDEQRRYFKAVKDFQEECN 169
                 446667777777777777777777777777776 PP

>> PF04758.9  Ribosomal protein S30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1   0.00094       1.4      36      58 ..      47      69 ..      43      70 .. 0.90
   2 ?    0.6   0.1      0.29   4.4e+02      39      56 ..     154     171 ..     153     174 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00094
   PF04758.9 36 lkYnrRfvnvvstagkkkgpNsq 58
                ++Y+rRfv++ ++ + k g N++
  MMETSP1325-20131115|8376_1 47 IQYERRFVELYQQVALKLGENKK 69
                79*********999999999985 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.29
   PF04758.9  39 nrRfvnvvstagkkkgpN 56 
                 +rR++++v+++ +   +N
  MMETSP1325-20131115|8376_1 154 QRRYFKAVKDFQEECNKN 171
                 59******8887665555 PP

>> PF02970.11  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.052        78      57      79 ..       5      27 ..       2      39 .. 0.87
   2 ?    6.0   1.7    0.0072        11      32      84 ..     101     154 ..      81     181 .. 0.82

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.052
                HHHHHHHHHHHHHHHHHHHHHHH CS
  PF02970.11 57 lpdlkkrlqkavadLeslleeee 79
                + d++ ++ +++++L++l++e +
  MMETSP1325-20131115|8376_1  5 IEDMHVKVMAKYDKLRQLVAERN 27
                6799**************99876 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0072
                 HHHH----HHHHHHHHHH---TTTHHHHHHHHHHHHHHHHHHHHHHHHT.--HH CS
  PF02970.11  32 klkaegedeydlkkqeeVlketekmlpdlkkrlqkavadLeslleeeee.leel 84 
                  ++++ ++e+ lk+ e ++k  e  l + +  l+ ++ +Lesl +++++ ++e 
  MMETSP1325-20131115|8376_1 101 AMQSKASKEQFLKQFEGIIKGVEDSLQRQQATLEGKTVRLESLTANHQNlVDEQ 154
                 35555669***********************************77777744443 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.066     1e+02     123     176 ..      18      70 ..       3      74 .. 0.82
   2 ?    3.0   6.8     0.039        60     118     179 ..      88     152 ..      44     185 .. 0.54

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.066
   PF04156.9 123 eelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqr 176
                 ++++ ++er+++++ ++  + +  ++++  i+ +++ v+  ++++ +l e++ +
  MMETSP1325-20131115|8376_1  18 KLRQLVAERNLAIAAKVRLIDDIPTRTE-LIQYERRFVELYQQVALKLGENKKY 70 
                 4567888899999999988888888888.9999999999999999999999876 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.039
   PF04156.9 118 lellq..........eelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqe 179
                   l++          + + s+e+ l+ +e  ik  ++++++++       ++++ ++ +le+l ++ q+l  
  MMETSP1325-20131115|8376_1  88 VNLINsisenfdaamQSKASKEQFLKQFEGIIKGVEDSLQRQQ-------ATLEGKTVRLESLTANHQNLVD 152
                 3333333322223335555555555555555555555555555.......6666666666666555555533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1219  (0.0891603); expected 273.4 (0.02)
Passed bias filter:                      588  (0.0430076); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.55
# Mc/sec: 814.76
//
Query:       MMETSP1325-20131115|8380_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-09   37.1   0.0    8.8e-09   35.6   0.0    1.7  2  PF00005.22 ABC transporter
     0.0016   18.3   0.0     0.0021   17.9   0.0    1.1  1  PF13304.1  AAA domain
  ------ inclusion threshold ------
       0.01   15.5   1.0       0.01   15.5   0.7    2.3  2  PF13558.1  Putative exonuclease SbcCD, C subunit
      0.012   14.7   0.2      0.016   14.2   0.1    1.2  1  PF02463.14 RecF/RecN/SMC N terminal domain
       0.02   14.9   0.9      0.033   14.2   0.6    1.3  1  PF09267.5  Dictyostelium STAT, coiled coil


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   3.2e-12   8.8e-09      71     118 .]       2      49 ..       1      49 [. 0.96
   2 ?   -0.9   0.0      0.67   1.8e+03      64      71 ..     106     116 ..      56     134 .. 0.55

  Alignments for each domain:
  == domain 1    score: 35.6 bits;  conditional E-value: 3.2e-12
                 HHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  71 evlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 ++l ++g +++++k+ +s+LS Gqk +v+  ++  ++++lllLDEPtn
  MMETSP1325-20131115|8380_1   2 KWLGRYGTTGAVQKQVMSQLSEGQKAKVVFSKMAKENAHLLLLDEPTN 49 
                 68899999**99999********************************8 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.67
                 -...-HHHHHH CS
                 x...xxxxxxx RF
  PF00005.22  64 k...tdkriee 71 
                     ++k+iee
  MMETSP1325-20131115|8380_1 106 MtlqRQKEIEE 116
                 02223333333 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   7.6e-07    0.0021     233     302 ..      17      80 ..       7      81 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 7.6e-07
   PF13304.1 233 plsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHSpvll 302
                  +s+lS+G+k    +  + +++     +ll+DEp n L+ +++  l+e l++ +     +++++H+  l+
  MMETSP1325-20131115|8380_1  17 VMSQLSEGQKAKVVFSKMAKENA---HLLLLDEPTNALDMEMIDSLAEALQQFKG---GVLLVSHDMRLI 80 
                 57899***********9999999...99*******************99988766...899999987776 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.7   3.8e-06      0.01      60      90 .]      35      65 ..       6      65 .. 0.81
   2 ?   -2.0   0.1       1.1   3.1e+03      28      30 ..     127     129 ..     103     148 .. 0.51

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 3.8e-06
   PF13558.1 60 repsirlvfLDEAFsklDeeniasllellrk 90
                 +++  l++LDE+++ lD e i+sl+e+l++
  MMETSP1325-20131115|8380_1 35 AKENAHLLLLDEPTNALDMEMIDSLAEALQQ 65
                367899*********************9975 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.1
   PF13558.1  28 rrt 30 
                 r  
  MMETSP1325-20131115|8380_1 127 RAG 129
                 222 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1     6e-06     0.016     136     208 ..      20      86 ..      13      95 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 6e-06
                 G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadkl 208
                 +LS G+k+     ++f+  + + a l llDe   aLD + +  +ae l++ +    ++ +s++ ++++k+ k 
  MMETSP1325-20131115|8380_1  20 QLSEGQKA----KVVFSKMAKENAHLLLLDEPTNALDMEMIDSLAEALQQFK--GGVLLVSHDMRLISKVAKE 86 
                 78888886....578999999****************************998..8899999999998887654 PP

>> PF09267.5  Dictyostelium STAT, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.6   1.2e-05     0.033      24     104 ..      13     102 ..      10     113 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.2e-05
                 HHHHHHHTS-SS......-S..CCCCHHHHHHHHHHHHH---.HHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF09267.5  24 aqkqlLadlsnt......ld..enskeilksLdseqitLkkq.leaelsaLdqlkktliLePtelakliiLlqdlsiqlkqLeLyheelq 104
                 +qkq++++ls++      +    ++++ l  Ld+  + L+ + +++  +aL+q k +++L   +++ +  + +++ i    L++++ e++
  MMETSP1325-20131115|8380_1  13 VQKQVMSQLSEGqkakvvFSkmAKENAHLLLLDEPTNALDMEmIDSLAEALQQFKGGVLLVSHDMRLISKVAKEIWIVDNGLSIFQGEIR 102
                 4555555555542112112211244567888999999998652689999**************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       677  (0.0495173); expected 273.4 (0.02)
Passed bias filter:                      513  (0.0375219); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 733.29
//
Query:       MMETSP1325-20131115|8377_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-19   70.3   0.3    1.9e-19   69.9   0.2    1.2  1  PF00258.20 Flavodoxin


Domain annotation for each model (and alignments):
>> PF00258.20  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9   0.2   1.4e-23   1.9e-19       1     143 []       8     156 ..       8     156 .. 0.90

  Alignments for each domain:
  == domain 1    score: 69.9 bits;  conditional E-value: 1.4e-23
                 EEEE-----HHHHHHHHHHHHHH.CTCEEEEEEGGGTTTC....HHHHHHHSEEEEEEEBCTCTSBEETTCHHHTTCHHHHHHG.GGGSCGTT-EEEEEECCHTTSSTTTTTHHHHHHHHHHCCEEEESE-EE-BTTTHGGHHHHHHHH CS
  PF00258.20   1 ilYgSetGnteklAkalaeglge.hgfnakvvslddydes....leeiehedlllvvtsTfgnGeppengesfaeellelkgke.eeagdlsnvrfavfglGdsaypkFcaagkaldekleelGaerllellegdednqegqeeafraw 143
                 ++YgSe+G+++   k++ ++ ++ +g++ +v +  + + +     +   +++++lv++s fg+G pp   e+f  el++ + k+ +++++l +++ av+g+G+  y++F++  +  d++lee G +r+ + +e+d++++eg ++ +++w
  MMETSP1325-20131115|8377_1   8 VVYGSESGTAKGAIKRITAEWMKkEGLKFTVADTMEGNAAaeqfSTLKDNYNVILVACSSFGDGYPPSGYEDFLKELYKARDKTfDQDPPLDGMQHAVLGFGSTIYETFQNNPRLTDKLLEECGSRRFAKRGEVDDTDEEGGKKTMETW 156
                 89***************8887764788877777777666677766677789****************9999*********97779999*************************************************998888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       542  (0.0396431); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 1208.60
//
Query:       MMETSP1325-20131115|8381_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|8378_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 475.07
//
Query:       MMETSP1325-20131115|8379_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.74    8.4   3.1       0.98    8.0   2.2    1.2  1  PF01698.11 Floricaula / Leafy protein


Domain annotation for each model (and alignments):
>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.2   7.1e-05      0.98     143     222 ..      51     137 ..      10     156 .. 0.42

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 7.1e-05
  PF01698.11 143 alsqeglseepvqeekeaags..ggeglgeaelvaaeekkseeekkkaskk.kqkrkkkkelkse...ededeeeeededeeg..sge 222
                 + ++ +++++ +++++ a+    +++  ++a  v +++ ++++++++ s +  q+r ++++++ +   +d+++++++++d++g  sg+
  MMETSP1325-20131115|8379_1  51 TSTSTSTANNMMNNMMGASLFgkSRSIPSTAPCVIKPDINNNSSSSSSSGRrGQRRSRNTTQQ-AnviDDDNDNKNKNTDGSGssSGS 137
                 112222222222222222222222222334444455543333332222222122222222222.134333333333333333311333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       935  (0.0683879); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.39s 00:00:01.01 Elapsed: 00:00:00.53
# Mc/sec: 922.37
//
Query:       MMETSP1325-20131115|8382_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 736.99
//
Query:       MMETSP1325-20131115|8383_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 703.93
//
Query:       MMETSP1325-20131115|8384_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-14   52.5   0.1    4.8e-14   52.3   0.1    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
    6.2e-11   41.4   1.1    1.8e-07   30.4   0.2    2.5  2  PF00023.25 Ankyrin repeat
    1.4e-10   40.2   0.1      4e-06   26.4   0.1    2.3  2  PF13606.1  Ankyrin repeat
    1.4e-10   41.2   0.1    2.5e-10   40.4   0.1    1.4  1  PF13637.1  Ankyrin repeats (many copies)
    2.5e-05   24.2   0.5    6.2e-05   22.9   0.4    1.7  1  PF13857.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.011   15.2   0.2       0.02   14.4   0.1    1.4  1  PF07338.8  Protein of unknown function (DUF1471)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.1   2.1e-17   4.8e-14      19      85 ..      49     114 ..      25     116 .] 0.91

  Alignments for each domain:
  == domain 1    score: 52.3 bits;  conditional E-value: 2.1e-17
   PF12796.2  19 kgadvdlget.pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadv 85 
                  ga v+   + pL   +++gn++ v+  l++gadvn  d   +t+ h+A++ngh+e++klL+e+ga+v
  MMETSP1325-20131115|8384_1  49 TGAVVN--ANpPLRRIVQNGNVDQVRSALDNGADVNGADTFHMTAAHYAAQNGHHEVLKLLIERGANV 114
                 567777..667999****************************************************98 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00042      0.96      10      29 ..      63      82 ..      56      86 .. 0.86
   2 !   30.4   0.2   7.9e-11   1.8e-07       3      28 ..      89     114 ..      88     115 .. 0.95

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00042
                HHTTHHHHHHHHHHTTSSTT CS
  PF00023.25 10 alrgnlevvklLlsqGAdln 29
                +++gn++ v+  l++GAd+n
  MMETSP1325-20131115|8384_1 63 VQNGNVDQVRSALDNGADVN 82
                899****************9 PP

  == domain 2    score: 30.4 bits;  conditional E-value: 7.9e-11
                 CBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   3 fTPLHlAalrgnlevvklLlsqGAdl 28 
                 +T+ H+Aa++g++ev+klL+++GA++
  MMETSP1325-20131115|8384_1  89 MTAAHYAAQNGHHEVLKLLIERGANV 114
                 6999********************97 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   9.3e-05      0.21       3      29 ..      56      82 ..      54      83 .. 0.91
   2 !   26.4   0.1   1.7e-09     4e-06       3      28 ..      89     114 ..      87     116 .] 0.93

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.3e-05
   PF13606.1  3 nTpLhlAasngrielveaLlengadin 29
                n pL   ++ng+++ v+  l+ngad+n
  MMETSP1325-20131115|8384_1 56 NPPLRRIVQNGNVDQVRSALDNGADVN 82
                67899999******************9 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 1.7e-09
   PF13606.1   3 nTpLhlAasngrielveaLlengadi 28 
                  T+ h+Aa+ng+ e++++L+e+ga++
  MMETSP1325-20131115|8384_1  89 MTAAHYAAQNGHHEVLKLLIERGANV 114
                 799*********************96 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.1   1.1e-13   2.5e-10       2      54 .]      56     108 ..      55     108 .. 0.96

  Alignments for each domain:
  == domain 1    score: 40.4 bits;  conditional E-value: 1.1e-13
   PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 + +L++ ++ g+++ v++ l++g+d+n  d + +ta h+Aa++g+ e+lklL+
  MMETSP1325-20131115|8384_1  56 NPPLRRIVQNGNVDQVRSALDNGADVNGADTFHMTAAHYAAQNGHHEVLKLLI 108
                 678999999*******************************************8 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.4   2.7e-08   6.2e-05       2      41 ..      75     113 ..      74     114 .. 0.95

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 2.7e-08
   PF13857.1   2 lehgpadvnatdeggntpLhlAakggalevvrlLlapgad 41 
                 l++g advn  d++ +t+ h+Aa +g+ ev++lL+++ga+
  MMETSP1325-20131115|8384_1  75 LDNG-ADVNGADTFHMTAAHYAAQNGHHEVLKLLIERGAN 113
                 7999.******************************99987 PP

>> PF07338.8  Protein of unknown function (DUF1471)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   8.6e-06      0.02      12      46 ..      64      99 ..      61     103 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 8.6e-06
   PF07338.8 12 gafgspsdaeaalakkAdakGAkyYvIisare..ngg 46
                ++ g+ + ++ al   Ad  GA+ ++ ++a+   ++g
  MMETSP1325-20131115|8384_1 64 QN-GNVDQVRSALDNGADVNGADTFHMTAAHYaaQNG 99
                45.8999***********************9876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 591.44
//
Query:       MMETSP1325-20131115|8386_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.6   0.1        5.2    7.1   0.0    2.0  2  PF13499.1 EF-hand domain pair
      0.072   12.9   0.2       0.59   10.0   0.0    2.2  2  PF13405.1 EF-hand domain


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0   0.00082       5.6       6      49 ..       7      50 ..       2      56 .. 0.88
   2 ?    7.1   0.0   0.00076       5.2       2      26 ..      59      83 ..      54      84 .] 0.85

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00082
   PF13499.1  6 FkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkel 49
                 + +D++g g l+  e    + ++++++  e++++++  i++++
  MMETSP1325-20131115|8386_1  7 VRFMDRSGEGDLSSVEVADSFAKINDDIEAESLEKEIGGIIRQV 50
                5669************************9999999998888876 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.00076
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrll 26
                l + F++lD+ +  +++ + L+  l
  MMETSP1325-20131115|8386_1 59 LVDFFRELDVAKVSRITSAQLKDGL 83
                5568****************99876 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.093   6.3e+02       7      23 ..       8      24 ..       3      33 .. 0.76
   2 ?   10.0   0.0   8.6e-05      0.59       2      27 ..      59      84 .]      58      84 .] 0.92

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.093
                GCC-------B---HHH CS
   PF13405.1  7 klfDkdgdGkidaeELr 23
                + +D+ g G ++  E+ 
  MMETSP1325-20131115|8386_1  8 RFMDRSGEGDLSSVEVA 24
                67788888888877765 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 8.6e-05
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                l ++F+ +D  +  +i+ ++L+d L+
  MMETSP1325-20131115|8386_1 59 LVDFFRELDVAKVSRITSAQLKDGLQ 84
                789*******************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|8385_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   13.7   0.0      0.033   13.3   0.0    1.1  1  PF03619.11 Organic solute transporter Ostalpha


Domain annotation for each model (and alignments):
>> PF03619.11  Organic solute transporter Ostalpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.4e-06     0.033     131     190 ..       7      60 ..       2      71 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.4e-06
  PF03619.11 131 iklgvlqyvvlkpilallalileafgvygegsfslksgylyltiilniSvslaLYsLvlF 190
                 +++g+ qyv   p+lal+ ++ +       +++++  +  ++ +i  +S ++ +Y+L ++
  MMETSP1325-20131115|8385_1   7 LRFGIKQYVYASPVLALFDVVADG------ENIDTGLVRPVIGVIFMASTMVGMYCLYVW 60 
                 6899*************9999887......5567788999*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 564.14
//
Query:       MMETSP1325-20131115|8387_1  [L=344]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-11   41.7   0.1    7.8e-11   41.2   0.1    1.2  1  PF07690.11 Major Facilitator Superfamily
     0.0013   17.1   2.9     0.0028   16.0   0.0    2.3  3  PF11700.3  Vacuole effluxer Atg22 like
  ------ inclusion threshold ------
      0.016   14.6   0.1      0.036   13.4   0.1    1.5  1  PF12071.3  Protein of unknown function (DUF3551)


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.1   1.7e-14   7.8e-11      30     174 ..     161     308 ..     130     335 .. 0.84

  Alignments for each domain:
  == domain 1    score: 41.2 bits;  conditional E-value: 1.7e-14
  PF07690.11  30 spseigwlltlyslgyaiasllaGrlsdrfGrrr.vlllglllfalglllllfasslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslg......WravFlilailsllaav.lvllllp 174
                 +++++ +++++ ++ +a +s+l+G  +d++G r  v ll++ +++l  ++l f + +    +v  v qGl+++++++a    +  ++ ++  g+a+g+++a  ++G +  pl+ ++++           +++F++++++++l+a+ l    ++
  MMETSP1325-20131115|8387_1 161 AEASAAFIMSIPYFMSACLSPLLGGTVDKVGGRAiVCLLSASILVLVHYILGFMPDVN--PAVPMVGQGLAYSMFASALWPSVPYTVDENSVGLAYGVITAVQNAGLAGLPLIVSAVYNDSDnlyipyVEVLFIAFGAVGVLSALgL---NIL 308
                 5678999************************9999************55555535655..688899999999999999999999999999****************************555579*9999999**********98832...333 PP

>> PF11700.3  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.21   9.4e+02      91     121 ..      50      82 ..      48      88 .. 0.70
   2 !   16.0   0.0   6.2e-07    0.0028      44     121 ..     114     214 ..      79     234 .. 0.78
   3 ?    0.7   0.6     0.026   1.2e+02     409     464 ..     245     300 ..     210     310 .. 0.68

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.21
   PF11700.3  91 sgaaDygnyRk..nlllafaligslstilflfv 121
                 +g aD  ++ k  +ll++++++++  +i+f +v
  MMETSP1325-20131115|8387_1  50 GGCADVAKFGKafWLLAFCCVVVYGDVIPFNNV 82 
                 677887777664467778888888777777666 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 6.2e-07
   PF11700.3  44 sdkttpcsa.......................eddqcvvkvagieintasfalytfsisvliqavlvisisgaaDygnyRknlllafaligslstilflfv 121
                 ++ +++c++                        ++ c  ++  +ei+ ++ a+ + si  ++ a l+++++g++D+ + R ++ l+ a i +l+  ++ f+
  MMETSP1325-20131115|8387_1 114 NEPNAHCESgdvwkpplpyniseddivctdnkWEKGCTKEYCDREIAAEASAAFIMSIPYFMSACLSPLLGGTVDKVGGRAIVCLLSASILVLVHYILGFM 214
                 4444555557777777777777777777777666779999999********************************************99999987776665 PP

  == domain 3    score: 0.7 bits;  conditional E-value: 0.026
   PF11700.3 409 iPrGkeaaFFaLfaitdkgssviGpllvglitdrtgniriaflflavLlllplpll 464
                 +++ + ++ ++  + +++++ +  pl+v+++ + + n+ i+++ ++++ + ++++l
  MMETSP1325-20131115|8387_1 245 VDENSVGLAYGVITAVQNAGLAGLPLIVSAVYNDSDNLYIPYVEVLFIAFGAVGVL 300
                 4555667789999999999999999*********9999999554444433333333 PP

>> PF12071.3  Protein of unknown function (DUF3551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1     8e-06     0.036      40      68 ..      96     124 ..      90     137 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 8e-06
   PF12071.3  40 gypgeCsYasfeqCraaAsGraaeCivNP 68 
                 +y+++C  + ++qC+  A + +a C   +
  MMETSP1325-20131115|8387_1  96 QYHDKCALDNIKQCQSKANEPNAHCESGD 124
                 79***********************6544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.51s 00:00:01.00 Elapsed: 00:00:00.71
# Mc/sec: 1161.05
//
Query:       MMETSP1325-20131115|8388_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.0   5.9       0.61    9.5   4.1    1.9  1  PF04847.7 Calcipressin
        2.1    8.3   7.1         11    6.1   0.9    2.3  2  PF05650.6 Domain of unknown function (DUF802)


Domain annotation for each model (and alignments):
>> PF04847.7  Calcipressin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.1     9e-05      0.61      95     140 ..      86     133 ..      85     184 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 9e-05
   PF04847.7  95 SPPaSPPvgweqre..eeaPnrivlaeDlqeaLakLeleekaellngk 140
                 SPP SPP    ++   e +P  + + +Dl++aLa+ +++ +a+ ++g 
  MMETSP1325-20131115|8388_1  86 SPPTSPPTPLRPSLqpEPSPGPTYHDQDLAAALASGAHHFEAQSKAGF 133
                 9**********87522667778999********998887666666654 PP

>> PF05650.6  Domain of unknown function (DUF802)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.9    0.0016        11      31      50 ..     111     130 ..     109     131 .. 0.90
   2 ?    5.2   0.3    0.0029        20      30      45 ..     143     158 ..     141     161 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0016
   PF05650.6  31 aqqLraaLeqfaatFeqrsa 50 
                  q+L aaL+  a++Fe+ s 
  MMETSP1325-20131115|8388_1 111 DQDLAAALASGAHHFEAQSK 130
                 699**************986 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0029
   PF05650.6  30 LaqqLraaLeqfaatF 45 
                 ++q+L+aaL+ +a  F
  MMETSP1325-20131115|8388_1 143 HHQDLQAALASAASPF 158
                 78**********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 1052.31
//
Query:       MMETSP1325-20131115|8389_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-13   49.0  23.4    4.3e-08   32.7   3.7    2.4  2  PF07716.10 Basic region leucine zipper
    1.1e-12   47.5  20.2      2e-08   33.9   2.8    2.2  2  PF00170.16 bZIP transcription factor
  ------ inclusion threshold ------
      0.079   12.5   0.3       0.16   11.6   0.2    1.5  1  PF13991.1  BssS protein family
      0.095   12.5   7.1        1.9    8.4   0.5    2.5  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.52   10.1   5.7       0.94    9.3   2.0    2.3  2  PF06657.8  Centrosome microtubule-binding domain of Cep57
        1.5    8.5  14.3        2.6    7.8   3.3    2.2  2  PF09831.4  Uncharacterized protein conserved in bacteria (DUF2058)
        2.7    6.7  11.5       0.28    9.9   0.6    2.1  2  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        4.1    6.8   8.5          3    7.2   0.3    2.8  2  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   3.7   2.5e-11   4.3e-08       2      45 ..      27      70 ..      26      79 .. 0.89
   2 !   21.8   7.0   6.5e-08   0.00011       5      42 ..     180     217 ..     177     223 .. 0.93

  Alignments for each domain:
  == domain 1    score: 32.7 bits;  conditional E-value: 2.5e-11
  PF07716.10  2 ddeyrerRrrNreAArrsRekkkakeeeleervkeLeeeNaqLr 45
                dd+  + R+rNre Arr+R++kka+ ++l++rv eL++e ++L 
  MMETSP1325-20131115|8389_1 27 DDKAARSRERNREHARRTRMRKKAHLQGLQNRVGELKQEAERLD 70
                788888899********************************995 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 6.5e-08
  PF07716.10   5 yrerRrrNreAArrsRekkkakeeeleervkeLeeeNa 42 
                 ++ rR+rNr+ A+ +R++kk+  ++le+++ eLe++N 
  MMETSP1325-20131115|8389_1 180 EKLRRERNRMHAKMTRDRKKRLIADLEQTISELETKNR 217
                 689**********************************7 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   2.8   1.2e-11     2e-08       2      49 ..      26      73 ..      25      80 .. 0.91
   2 !   19.4   5.7   3.8e-07   0.00065       8      47 ..     182     221 ..     176     235 .. 0.87

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 1.2e-11
                XXXCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....... CS
  PF00170.16  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                 ++k++r +++NRe Arr R RKka ++ L+++v eL++e ++L   l
  MMETSP1325-20131115|8389_1 26 HDDKAARSRERNREHARRTRMRKKAHLQGLQNRVGELKQEAERLDVAL 73
                579*************************************99997555 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 3.8e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..... CS
  PF00170.16   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                  r+++NR  A+  R RKk  i+ Le+ + eLe++N++ ++
  MMETSP1325-20131115|8389_1 182 LRRERNRMHAKMTRDRKKRLIADLEQTISELETKNRTRRQ 221
                 79*********************************86554 PP

>> PF13991.1  BssS protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   9.2e-05      0.16      40      70 ..     191     221 ..     176     223 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.2e-05
   PF13991.1  40 lvLttdvArqLisiLeagIakiesseyakpd 70 
                   +t d  + Li +Le++I ++e+++ + ++
  MMETSP1325-20131115|8389_1 191 AKMTRDRKKRLIADLEQTISELETKNRTRRQ 221
                 56999*******************9988776 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.6    0.0023       3.9      61      95 ..      44      78 ..       7     104 .. 0.84
   2 ?    8.4   0.5    0.0011       1.9      43      83 ..     177     216 ..     163     229 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0023
                GTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17 61 kakkkkedaeeliaevkelkeelkaleaelkelea 95
                  ++kk   + l ++v elk+e + l+ +l e+++
  MMETSP1325-20131115|8389_1 44 TRMRKKAHLQGLQNRVGELKQEAERLDVALGEVTT 78
                457788899******************99999875 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHH CS
  PF02403.17  43 veleelqaerNelskeIgkakkkkedaeeliaevkelkeel 83 
                 +ele+l++erN++ +++ +  kk   +++l +++ el ++ 
  MMETSP1325-20131115|8389_1 177 AELEKLRRERNRMHAKMTRDRKKR-LIADLEQTISELETKN 216
                 699**************9999876.5555555555555444 PP

>> PF06657.8  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.23     4e+02      11      36 ..      51      76 ..      41      93 .. 0.65
   2 ?    9.3   2.0   0.00055      0.94      32      70 ..     178     216 ..     175     218 .. 0.94

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.23
   PF06657.8 11 pkeaLaevlkeLeDElehlkmeyqel 36
                  + L+ ++ eL+ E e l   + e+
  MMETSP1325-20131115|8389_1 51 HLQGLQNRVGELKQEAERLDVALGEV 76
                45567788888888888877777666 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00055
   PF06657.8  32 eyqeladelkkldaslskrkrkeLaqeleellkrlEaKa 70 
                 e+++l+ e + + a +++ ++k+L+ +le+ + +lE+K+
  MMETSP1325-20131115|8389_1 178 ELEKLRRERNRMHAKMTRDRKKRLIADLEQTISELETKN 216
                 89999*********************************7 PP

>> PF09831.4  Uncharacterized protein conserved in bacteria (DUF2058)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   3.3    0.0015       2.6      31      91 ..       7      69 ..       3      82 .. 0.74
   2 ?    6.0   1.4     0.005       8.6      38      88 ..     166     216 ..     157     222 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0015
   PF09831.4 31 akkaaaeeedeakeaveeakaekaerdrelneq..rqeeaeekalkaqikqlieqnkikkkeg 91
                 k+a+++++++ ++++ee +++ka+r re+n++  r+ ++++ka  + +++ + + k++ ++ 
  MMETSP1325-20131115|8389_1  7 DKSAEDATDEAYEREAEEDHDDKAARSRERNREhaRRTRMRKKAHLQGLQNRVGELKQEAERL 69
                45666788888999*************999987224555667777777777766666666555 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.005
   PF09831.4  38 eedeakeaveeakaekaerdrelneqrqeeaeekalkaqikqlieqnkikk 88 
                 ++d +++ +  a+ ek++r+r++ +++  + ++k l a ++q i++ + k+
  MMETSP1325-20131115|8389_1 166 DDDGRRQPLSAAELEKLRRERNRMHAKMTRDRKKRLIADLEQTISELETKN 216
                 5667788899999*******************************9988776 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   2.7     0.047        81      46      96 ..      21      69 ..       4      97 .. 0.50
   2 ?    9.9   0.6   0.00017      0.28      53     108 ..     164     224 ..     125     238 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.047
   PF10186.4 46 aleeaene.........kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieel 96
                + e    e         + ++ +  +  +++k       +++++ l++++ +++++ e+l
  MMETSP1325-20131115|8389_1 21 EAE----EdhddkaarsRERNREHARRTRMRK-------KAHLQGLQNRVGELKQEAERL 69
                222....2232122222233333333333333.......344444444444444444443 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00017
   PF10186.4  53 e.....kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle 108
                 +     +++ + +  le++++++++   +++ +++k+ i  + + i+el+ ++++rr+ l 
  MMETSP1325-20131115|8389_1 164 KldddgRRQPLSAAELEKLRRERNRMHAKMTRDRKKRLIADLEQTISELETKNRTRRQALG 224
                 05555578888899999****************************************9987 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.3    0.0018         3      24      50 ..      43      69 ..      27      76 .. 0.83
   2 ?    2.4   1.5     0.056        95      19      57 ..     195     218 ..     175     222 .. 0.53

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0018
  PF04977.10 24 qeiaalqaelaklkaeneeLeaevkdL 50
                +   +++a+l+ l+++  eL++e ++L
  MMETSP1325-20131115|8389_1 43 RTRMRKKAHLQGLQNRVGELKQEAERL 69
                555678999999999999999999998 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.056
  PF04977.10  19 lyqlkqeiaalqaelaklkaeneeLeaevkdLksdedyi 57 
                 + ++k+ ia              +Le+ +++L  ++++ 
  MMETSP1325-20131115|8389_1 195 RDRKKRLIA--------------DLEQTISEL-ETKNRT 218
                 333444444..............555555555.354444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1325  (0.0969134); expected 273.4 (0.02)
Passed bias filter:                      620  (0.0453482); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.65u 0.46s 00:00:01.11 Elapsed: 00:00:00.56
# Mc/sec: 1072.05
//
Query:       MMETSP1325-20131115|8391_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.03   14.2   0.4      0.032   14.1   0.3    1.0  1  PF09485.5 CRISPR-associated protein Cse2 (CRISPR_cse2)
       0.11   12.4   2.0       0.12   12.3   1.4    1.1  1  PF07978.8 NIPSNAP


Domain annotation for each model (and alignments):
>> PF09485.5  CRISPR-associated protein Cse2 (CRISPR_cse2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   4.7e-06     0.032      15      58 ..       8      49 ..       2      55 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.7e-06
   PF09485.5 15 vllreafalyvappalarldereeaeeealalvaallahhkqsr 58
                ++++ea a +  ++  a+ +   +aee+++a++aa ++h+++s+
  MMETSP1325-20131115|8391_1  8 ADTPEACAYWYVVYSNAQAES--QAEEARWAAAAAQYHHQRSSS 49
                455666644455554344443..9999*********99998876 PP

>> PF07978.8  NIPSNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.4   1.7e-05      0.12      36      79 ..       1      45 [.       1      54 [. 0.88

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.7e-05
                ---EEEEE--.-SEEEEEE----HHHHHHH---TTT-HHHHHHHH CS
   PF07978.8 36 iGyfaseiGa.lnqvvhlwafdslaareayraalaadpewaaver 79
                +G+++s+ +  + ++++ + + +++a  ++++a +a ++ +++++
  MMETSP1325-20131115|8391_1  1 LGAWFSKADTpEACAYWYVVYSNAQAESQAEEARWAAAAAQYHHQ 45
                59********9************************9998865554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       573  (0.0419105); expected 273.4 (0.02)
Passed bias filter:                      441  (0.0322557); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|8392_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.055   13.8   0.9      0.063   13.7   0.6    1.2  1  PF03964.10 Chorion family 2
       0.15   12.3   0.1       0.44   10.8   0.0    1.7  2  PF00084.15 Sushi domain (SCR repeat)


Domain annotation for each model (and alignments):
>> PF03964.10  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.6   9.3e-06     0.063       4      62 ..      26      83 ..      12      86 .] 0.82

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 9.3e-06
  PF03964.10  4 gapvggyayqvqpaltvkaivsYgrargnsgygrsgslvssssdssAaaaAasalaaln 62
                +++ g  +  ++ + +++++   + + g  g gr ++++  ++ s+  aaAa+a+aa +
  MMETSP1325-20131115|8392_1 26 RYGTGSTGGEEEKYEEGQEV-EIKCKLGDAGTGRIEIGAEAPVLSETTAAAAAAAAAEA 83
                45556666777777777775.77778899999999**************9999999865 PP

>> PF00084.15  Sushi domain (SCR repeat)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.35   2.4e+03      27      31 ..       5       9 ..       2      12 .. 0.61
   2 ?   10.8   0.0   6.4e-05      0.44      14      37 ..      34      57 ..      23      63 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.35
  PF00084.15 27 yeCde 31
                y+C++
  MMETSP1325-20131115|8392_1  5 YTCHD 9 
                66654 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 6.4e-05
  PF00084.15 14 atkesysvgekvkyeCdeGyklvg 37
                 ++e y++g++v+++C+ G    g
  MMETSP1325-20131115|8392_1 34 GEEEKYEEGQEVEIKCKLGDAGTG 57
                3449*************9976665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 374.70
//
Query:       MMETSP1325-20131115|8393_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 391.71
//
Query:       MMETSP1325-20131115|8394_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 565.95
//
Query:       MMETSP1325-20131115|8395_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 262.24
//
Query:       MMETSP1325-20131115|8396_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-07   28.1   0.0    8.2e-07   27.9   0.0    1.0  1  PF00135.23 Carboxylesterase family


Domain annotation for each model (and alignments):
>> PF00135.23  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0     6e-11   8.2e-07     446     538 .]      13     113 ..       3     113 .. 0.77

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 6e-11
                 SSETT-TTBTTTHHHHHBTTTTCHHHCT......-HHHHHHHHHHHHHHHHHHHHSST.SCTTTTSS----B-TTT....EEEECCEEEEEESTTHHH.HHHH CS
  PF00135.23 446 lkpkwrgvshgdeleyvfgvplseklek......seeeeklskrmmkywtnFaktgnP.ngesseeskwppytkeeq...yleitllkkvekklreedkcafw 538
                 + +  +gv hg+el +vf+   +  l +       +e +   k +  yw +Fa tg     + +  ++w p+tkee+   yl++   ++++++l++ + c+fw
  MMETSP1325-20131115|8396_1  13 PPYDQMGVFHGTELGFVFDFEPALDLVEapptdiYTESQL-AKLIGSYWGTFAATGVDpSPDDTAVPAWAPFTKEEEvnvYLDTARVEASASGLKSDK-CDFW 113
                 66789*************9766666555688875444444.39999**********7655555899*********99677777777777777777777.***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 616.21
//
Query:       MMETSP1325-20131115|8397_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 300.63
//
Query:       MMETSP1325-20131115|8399_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       556  (0.0406671); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 350.90
//
Query:       MMETSP1325-20131115|8398_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-05   22.2  16.1    0.00033   20.4  11.2    1.7  1  PF08614.6  Autophagy protein 16 (ATG16)
     0.0056   16.2  13.2      0.068   12.7   9.2    1.9  1  PF03962.10 Mnd1 family
  ------ inclusion threshold ------
       0.01   15.3   8.5      0.031   13.8   0.4    3.6  3  PF02183.13 Homeobox associated leucine zipper
      0.034   13.2   9.0      0.041   12.9   6.2    1.0  1  PF02601.10 Exonuclease VII, large subunit
      0.077   10.2  12.7      0.087   10.0   8.8    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
      0.079   12.6   5.4        1.5    8.5   0.7    2.1  2  PF07439.6  Protein of unknown function (DUF1515)
       0.11   12.3   9.8       0.11   12.3   0.6    2.8  2  PF14197.1  Centrosome localisation domain of PPC89
       0.12   11.8  14.6       0.62    9.5  10.1    1.9  1  PF04156.9  IncA protein
       0.17   11.5   4.4       0.11   12.2   0.6    2.0  2  PF10158.4  Tumour suppressor protein
       0.25   10.6   8.0        0.3   10.4   1.9    2.3  2  PF05811.8  Eukaryotic protein of unknown function (DUF842)
       0.32   10.5  10.2       0.69    9.4   1.7    2.1  2  PF05227.8  CHASE3 domain
       0.32   10.9   7.4       0.42   10.5   5.1    1.2  1  PF08432.5  Fungal protein of unknown function (DUF1742)
       0.37   11.0  12.7       0.29   11.3   2.2    2.8  3  PF06156.8  Protein of unknown function (DUF972)
       0.41   10.1   9.6        5.4    6.5   1.7    2.6  3  PF10224.4  Predicted coiled-coil protein (DUF2205)
        0.9    8.5  15.7        1.6    7.7   9.4    1.9  2  PF13851.1  Growth-arrest specific micro-tubule binding
       0.92    9.3  14.1        1.2    8.9   9.8    1.1  1  PF06818.10 Fez1
       0.97    7.0   6.2        1.1    6.9   4.3    1.1  1  PF01496.14 V-type ATPase 116kDa subunit family
        1.1    9.1   4.6        8.8    6.1   0.4    2.9  3  PF04003.7  Dip2/Utp12 Family
        1.6    8.8   4.2        1.7    8.8   1.0    2.2  2  PF05531.7  Nucleopolyhedrovirus P10 protein
        2.7    8.0  12.4        4.3    7.3   6.8    2.5  3  PF12709.2  Central kinetochore-associated
        4.5    6.9  19.7    1.5e+02    2.0  11.9    3.0  1  PF07926.7  TPR/MLP1/MLP2-like protein
        4.8    6.8   9.2        8.4    6.1   1.0    2.1  2  PF07889.7  Protein of unknown function (DUF1664)
        7.5    5.8  11.6         53    3.0   8.0    2.2  1  PF13093.1  Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
        8.9    6.2  16.1        5.8    6.8   2.0    2.8  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain


Domain annotation for each model (and alignments):
>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4  11.2   5.7e-07   0.00033      59     193 ..       4     129 ..       1     130 [. 0.86

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 5.7e-07
   PF08614.6  59 sasgsgsdaaiaeleqklaklreelaelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkekekaletlqDElaslnlelslleeklsklqkenkeLveRWlakkn...eeAekmN 193
                 s+sg+++  a+a++++k+++l+eel+  +k+++e a++ l+lne+           ek l+++q+++++ e+  + l ee +++  ++  lq El+s+   l   ee  + l +en+  v R l+ k+    e +kmN
  MMETSP1325-20131115|8398_1   4 SHSGMVQ-QAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEA-----------EKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDSVRGLLAKKEEECTALRAENDAFVMRMLEDKAamvAEMNKMN 129
                 5555544.46899******************99998887777765...........58999***************************************************************87661115666666 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   9.2   0.00012     0.068      62     162 ..      35     136 ..      10     141 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00012
  PF03962.10  62 eakkklkteleklkkeleelkqrikelqaeiekekkkreeteeree.lleelkeleeelkklkkeleklakldpekveklkeetevakesanrwtDniflle 162
                  ++ + k +l++++k l+++++++ e ++++e  ++++e+ ++ +  l++el++++  l k+++e+++l+  + + v ++ e+   + +++n+++D i  ++
  MMETSP1325-20131115|8398_1  35 AEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGlLQKELDSVRGLLAKKEEECTALRAENDAFVMRMLEDKAAMVAEMNKMNDLIVQMK 136
                 566788999*************************99999987777757889***********************************************9987 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.86   4.9e+02      29      42 ..      25      38 ..      13      41 .. 0.69
   2 ?   13.8   0.4   5.5e-05     0.031      14      44 ..      65      95 ..      62      96 .. 0.85
   3 ?    4.1   0.1      0.06        34      14      39 ..     100     129 ..      97     135 .. 0.67

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.86
  PF02183.13 29 ekLraevlsLkekl 42
                e+L a+ +s +e +
  MMETSP1325-20131115|8398_1 25 EELTAQYKSSAEAA 38
                56777777766655 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 5.5e-05
  PF02183.13 14 ydaLkaendsLqkEkekLraevlsLkeklqe 44
                y+ L++en++L   +  L++e+ s ++ l +
  MMETSP1325-20131115|8398_1 65 YEVLAEENEKLTTSNGLLQKELDSVRGLLAK 95
                9999999999999999999999998887765 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.06
  PF02183.13  14 ydaLkaend....sLqkEkekLraevlsLk 39 
                 + aL+aend    +++++k+++ ae+ +++
  MMETSP1325-20131115|8398_1 100 CTALRAENDafvmRMLEDKAAMVAEMNKMN 129
                 566777777333347778888888877665 PP

>> PF02601.10  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   6.2   7.1e-05     0.041     141     271 ..       9     136 ..       2     142 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 7.1e-05
  PF02601.10 141 ivpnkeelkeklknleqrlsralksklekekaklnllknrltlksrrkplskleqeeerleelkerleksleqllqskesqleklnaslaknnpdyklnkklekitllkneldselssaesklrileeklk 271
                 + + + +++ek+++l+++l+ ++ks +e  + kl+l + ++ l s +++l + e+  e l+e +e+l++ ++ llq++  +++ l a  +k+++ ++l+ +  ++ ++  e + ++ ++ +k+++l  ++k
  MMETSP1325-20131115|8398_1   9 VQQAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTT-SNGLLQKELDSVRGLLA--KKEEECTALRAENDAFVMRMLEDKAAMVAEMNKMNDLIVQMK 136
                 56678899***********************************99666555555555555555555554.44444444444444332..222222333333333333334444444444555555555554 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   8.8   0.00015     0.087     242     370 ..      14     141 ..       7     144 .] 0.85

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00015
   PF12128.3 242 ekvapeieklqeefeqleslllkLqllhvelkadeerleeeqeevkeakkelkeqlrtledelkeasdelnqelsaanakleakeselealeeqkkkfedkdieklkadldqlpsirseleeveaelda 370
                   ++++i+ lqee ++     ++++ ++ +l ++e++l + q++  e++k ++  l++++++l ++   l++el   ++ l++ke+e  al +++++f    +e  +a   ++ ++++ + +++a+l+a
  MMETSP1325-20131115|8398_1  14 ATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEV-LAEENEKLTTSNGLLQKELDSVRGLLAKKEEECTALRAENDAFVMRMLEDKAAMVAEMNKMNDLIVQMKAQLAA 141
                 468899999999999988889999999999999999999999998888777765.67778889999999999999999999999999999999999999999999999888888888888888888876 PP

>> PF07439.6  Protein of unknown function (DUF1515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1     0.011       6.2       4      42 ..       7      44 ..       5      68 .. 0.68
   2 ?    8.5   0.7    0.0026       1.5       9      68 ..      78     137 ..      71     142 .. 0.90

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.011
   PF07439.6  4 agvlqqlgtllaevkelredlk...rsedrsdasrakmyrkm 42
                + v+q+  t++ ++  l+e+l    +    s+a  a+ + k+
  MMETSP1325-20131115|8398_1  7 GMVQQAQATMQEKISSLQEELTaqyK----SSAEAAETKLKL 44
                567888899***********984332....333333333333 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0026
   PF07439.6   9 qlgtllaevkelredlkrsedrsdasrakmyrkmdelvervtalegsvvklkaditsvke 68 
                 + g l++e+  +r  l + e+ + a ra+    +  ++e  +a+ + + k+++ i ++k 
  MMETSP1325-20131115|8398_1  78 SNGLLQKELDSVRGLLAKKEEECTALRAENDAFVMRMLEDKAAMVAEMNKMNDLIVQMKA 137
                 557799***********************99999999999999999999****9999995 PP

>> PF14197.1  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   3.4       0.4   2.3e+02       2      44 ..      15      53 ..       8      77 .. 0.62
   2 ?   12.3   0.6    0.0002      0.11       3      41 ..      75     113 ..      66     119 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.4
   PF14197.1  2 rLeaevktLrnrl.dsltrkvqvheielksLnkErdsalrqLgv 44
                ++ + +++L+++l  +  +  +++e+ lk + +E      +L++
  MMETSP1325-20131115|8398_1 15 TMQEKISSLQEELtAQYKSSAEAAETKLKLNEAEK-----ALDS 53
                46777888888886666666777776666555544.....3333 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.0002
   PF14197.1   3 LeaevktLrnrldsltrkvqvheielksLnkErdsalrq 41 
                 L + +  L+ +lds +  +++ e+e  +L++E+d ++++
  MMETSP1325-20131115|8398_1  75 LTTSNGLLQKELDSVRGLLAKKEEECTALRAENDAFVMR 113
                 5555556799************************99987 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  10.1    0.0011      0.62      76     155 ..      25     106 ..       2     142 .. 0.62

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0011
   PF04156.9  76 e.....srlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisd 155
                 e      ++++e +e +  l+e+e+ l+  + +l e+e+ +e l e++e+l + +  l+++l+s++  ++++++e++ lr    +
  MMETSP1325-20131115|8398_1  25 EeltaqYKSSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDSVRGLLAKKEEECTALR---AE 106
                 13444545667777777777777777777777777777777777777777777777777777777777777777777777...22 PP

>> PF10158.4  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.6   0.00019      0.11      59     113 ..      14      68 ..       5      83 .. 0.85
   2 ?    0.9   0.1      0.58   3.3e+02     104     116 ..     116     128 ..      70     143 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00019
   PF10158.4  59 kevdakietllaelrekqkryasyaeqlskvnelsdqlsriqiiledivpllEtl 113
                   +++ki++l +el ++ k  a+ ae+  k+ne ++ l ++q  l +  +  E l
  MMETSP1325-20131115|8398_1  14 ATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVL 68 
                 46999**************************************998876555554 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.58
   PF10158.4 104 edivpllEtlnel 116
                 ed+ +++ ++n++
  MMETSP1325-20131115|8398_1 116 EDKAAMVAEMNKM 128
                 3333333333333 PP

>> PF05811.8  Eukaryotic protein of unknown function (DUF842)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.9   0.00053       0.3      58     112 ..       8      58 ..       4      68 .. 0.80
   2 ?    2.6   0.8      0.13        76      56      87 ..      72     103 ..      53     140 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00053
   PF05811.8  58 plakaqqlveselekfqdrLqrclmeCqdklkdklasnknesdaakelerCvnkc 112
                  +++aq ++++ ++++q+ L+   ++ ++ +++kl++n    +a+k l++C  + 
  MMETSP1325-20131115|8398_1   8 MVQQAQATMQEKISSLQEELTAQYKSSAEAAETKLKLN----EAEKALDSCQAQL 58 
                 5899*****************99999999988888544....5566777777665 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.13
   PF05811.8  56 svplakaqqlveselekfqdrLqrclmeCqdk 87 
                 +++l++++ l+++el++    L +   eC+  
  MMETSP1325-20131115|8398_1  72 NEKLTTSNGLLQKELDSVRGLLAKKEEECTAL 103
                 56788999999999999999999999999754 PP

>> PF05227.8  CHASE3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.7    0.0012      0.69      66     134 ..       3      71 ..       1      74 [. 0.81
   2 ?    6.6   1.4    0.0093       5.3      51     127 ..      65     138 ..      60     142 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0012
   PF05227.8  66 peqqerldrlealieqkleeleetialrreggleaalalvrsdegkelmdqirelvaemqaeerrllaq 134
                 p+++  +++++a++++k++ l+e++ ++   ++eaa+  ++ +e +++ d  +++++e ++  + l ++
  MMETSP1325-20131115|8398_1   3 PSHSGMVQQAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEE 71 
                 677778999*********7777666666666************************99987666655555 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0093
   PF05227.8  51 ieeeleelrrltsdnpeqqerldrlealieqkleeleetialrreggleaalalvrsdegkelmdqirelvaemqae 127
                 +e + ee ++lt  n   q+ ld ++ l+++k    ee  alr+e+++  ++ l  ++   + m+++ +l+ +m+a+
  MMETSP1325-20131115|8398_1  65 YEVLAEENEKLTTSNGLLQKELDSVRGLLAKK---EEECTALRAENDAFVMRMLEDKAAMVAEMNKMNDLIVQMKAQ 138
                 5667788899999*******************...688899999966667777777778888899999999999886 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   5.1   0.00073      0.42      61     168 ..      10     127 ..       2     140 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00073
   PF08432.5  61 kkkkkelkeeiekvkkeyeekqkakkekkkkk.kekdkekekkkdkkddksekekekeeeekaeelkkseeeaastldel.........kprkyaLhkefyqsRidrkrkaevakker 168
                 ++ + +++e+i+++++e+ ++ k  +e+ ++k k +++ek  ++ +++ ++ ++ ++  +e++e+l++s+   +++ld +         ++ +   +++ + +R+ + + a+va+ ++
  MMETSP1325-20131115|8398_1  10 QQAQATMQEKISSLQEELTAQYKSSAEAAETKlKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDSVrgllakkeeECTALRAENDAFVMRMLEDKAAMVAEMNK 127
                 5678999***********9999999999888888899999999999999999999999999999999988777777666433344332222333334477777777777777766655 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   3.4      0.25   1.4e+02      11      57 ..      14      60 ..       5      74 .. 0.49
   2 ?   11.3   2.2   0.00051      0.29       9      59 ..      43      93 ..      35     101 .. 0.84
   3 ?    9.1   2.2    0.0025       1.4       8      64 ..      70     125 ..      66     142 .. 0.74

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.25
   PF06156.8 11 seleeqleelleeleelkkelkelleenaelkleneklrerleelee 57
                ++++e++++l+eel++  k+ +e  e   +l+   ++l +  ++l+e
  MMETSP1325-20131115|8398_1 14 ATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTE 60
                34555555555555555555555555555555554444443333333 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00051
   PF06156.8  9 klseleeqleelleeleelkkelkelleenaelkleneklrerleeleeee 59
                kl+e e+ l++++++l+e +k  + l een++l++ n  l+++l++++   
  MMETSP1325-20131115|8398_1 43 KLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDSVRGLL 93
                78999***************************************9987733 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.0025
   PF06156.8   8 dklseleeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkkek 64 
                 ++ ++l ++ + l++el++++  l++  ee ++l+ en+++  r+ e +++   +e 
  MMETSP1325-20131115|8398_1  70 EENEKLTTSNGLLQKELDSVRGLLAKKEEECTALRAENDAFVMRMLEDKAA-MVAEM 125
                 556778888889999*************************99998887662.22222 PP

>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   1.7    0.0094       5.4      14      58 ..       9      53 ..       2      63 .. 0.87
   2 ?    6.5   2.2    0.0095       5.4      29      58 ..      55      84 ..      38      97 .. 0.75
   3 ?   -2.6   0.0       6.5   3.7e+03      43      54 ..      97     108 ..      86     117 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0094
   PF10224.4 14 ekeekqrlieqvleLqdsLedLseRveaVkeendKLeseNkvLqq 58
                 ++++++++e++ +Lq+ L +  +   +  e ++KL++  k L +
  MMETSP1325-20131115|8398_1  9 VQQAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDS 53
                57899****************999999999999999999998876 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0095
   PF10224.4 29 qdsLedLseRveaVkeendKLeseNkvLqq 58
                q+ L +  +  e+  een+KL   N +Lq+
  MMETSP1325-20131115|8398_1 55 QAQLTESEKGYEVLAEENEKLTTSNGLLQK 84
                566666667789999*************97 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 6.5
   PF10224.4  43 keendKLeseNk 54 
                 +ee   L+ eN 
  MMETSP1325-20131115|8398_1  97 EEECTALRAEND 108
                 455566677764 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   9.4    0.0028       1.6      54     127 ..      10      83 ..       4     126 .. 0.67
   2 ?    2.1   0.4      0.15        85      87     117 ..      85     115 ..      77     143 .. 0.51

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0028
   PF13851.1  54 kkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErdely 127
                 ++ +  ++e++  ++ee +   k  +++++ k +L+++++ l++++ +l++ ++ +evl +  ek+ +    l+
  MMETSP1325-20131115|8398_1  10 QQAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQ 83 
                 56666677777777777777777777777777777777777777777777777777777777777665444333 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.15
   PF13851.1  87 sLknlkaklkelekelknlkwesevleqrfe 117
                 +L +++  l ++e+e ++l+ e++ + +r+ 
  MMETSP1325-20131115|8398_1  85 ELDSVRGLLAKKEEECTALRAENDAFVMRML 115
                 4555555555556666666666655555543 PP

>> PF06818.10  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   9.8    0.0022       1.2      20     147 ..      10     139 ..       7     143 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0022
  PF06818.10  20 kesqaelaqkaseils.LraqlrearaelqeseeklqelkdalrtktleLevceneLqrkkseaellrekagrleaelaelrealasagtlkedclllsesdeakarrqa.....geetlrelrrqverlraeL 147
                 +++qa +++k s +   L aq + + ae  e++ kl+e+++al + +++L  +e+  +   +e+e l    g l++el ++r  la++   +e+c++l  +++a + r         +++++++  + +++a+L
  MMETSP1325-20131115|8398_1  10 QQAQATMQEKISSLQEeLTAQYK-SSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDSVRGLLAKK---EEECTALRAENDAFVMRMLedkaaMVAEMNKMNDLIVQMKAQL 139
                 56788888888888642666666.568999999************************99***********************999987...8999999998886555444121112233344444455666666 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.3    0.0019       1.1      41     130 ..      14     105 ..       3     138 .. 0.60

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0019
                 XXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XX CS
  PF01496.14  41 rkleseikkakielk..dekekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrelsslde 130
                 + ++++i+ ++ el    + + + ++++ ++++ e+ l++++++l e e+  e L +e ++l+  + +l++e +++     ++ +e + l  
  MMETSP1325-20131115|8398_1  14 ATMQEKISSLQEELTaqYKSSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDSVRGLLAKKEEECTALRA 105
                 44455555555555432222234444444777788888888888888888888888888888887777777777766644333334444444 PP

>> PF04003.7  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.4     0.015       8.8      62      99 ..       4      41 ..       3      48 .. 0.87
   2 ?    1.6   0.0      0.38   2.2e+02      73     103 ..      46      75 ..      42      77 .. 0.85
   3 ?    2.7   0.1      0.18     1e+02      66      99 ..      74     107 ..      66     118 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.015
   PF04003.7 62 aHgkalqaqapsllpaLrslqkvlrrrlkdlaklleln 99
                +H++  q+++ +++++++slq+ l+  +k+ a ++e +
  MMETSP1325-20131115|8398_1  4 SHSGMVQQAQATMQEKISSLQEELTAQYKSSAEAAETK 41
                58888888889******************999998877 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.38
   PF04003.7  73 sllpaLrslqkvlrrrlkdlakllelnvykL 103
                 +  +aL s+q +l++  k ++ l+e n  kL
  MMETSP1325-20131115|8398_1  46 EAEKALDSCQAQLTESEKGYEVLAEEN-EKL 75 
                 56799***********99999999999.665 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.18
   PF04003.7  66 alqaqapsllpaLrslqkvlrrrlkdlaklleln 99 
                 +l++++  l+++L s++ +l ++ ++  +l   n
  MMETSP1325-20131115|8398_1  74 KLTTSNGLLQKELDSVRGLLAKKEEECTALRAEN 107
                 5677779999************999998887666 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   1.0    0.0029       1.7      11      60 ..      11      60 ..       6      76 .. 0.84
   2 ?   -0.0   0.0       1.7   9.5e+02      44      44 ..     115     115 ..      76     142 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0029
   PF05531.7 11 adikavddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkven 60
                ++ + +++k+++lq++++   + + +  e + kL++  ++L++ ++++++
  MMETSP1325-20131115|8398_1 11 QAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTE 60
                56677899*********888888888899999999999999998887765 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 1.7
   PF05531.7  44 L 44 
                 L
  MMETSP1325-20131115|8398_1 115 L 115
                 2 PP

>> PF12709.2  Central kinetochore-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.8    0.0075       4.3       5      70 ..       8      77 ..       4     105 .. 0.74
   2 ?    0.4   0.1       1.1   6.2e+02      48      71 ..      83     106 ..      78     126 .. 0.74
   3 ?   -0.7   0.1       2.5   1.4e+03      56      69 ..     123     136 ..      93     142 .. 0.55

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0075
   PF12709.2  5 kleekeketekkleklAedLyvqYssKHEqKVkaLkKsYeak....yekkldelelenkalkeeieqLkk 70
                +++++++ +++k+ +l e+L +qY+s  E     Lk +  +k     +++l e e+  + l ee+e+L++
  MMETSP1325-20131115|8398_1  8 MVQQAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKaldsCQAQLTESEKGYEVLAEENEKLTT 77
                67899999******************99887777773322221111566777777777777777777765 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 1.1
   PF12709.2  48 ekkldelelenkalkeeieqLkkq 71 
                 +k+ld ++  + +++ee+  L+++
  MMETSP1325-20131115|8398_1  83 QKELDSVRGLLAKKEEECTALRAE 106
                 677777777777888888887764 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 2.5
   PF12709.2  56 lenkalkeeieqLk 69 
                  e++++++ i q+k
  MMETSP1325-20131115|8398_1 123 AEMNKMNDLIVQMK 136
                 23344444444444 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0  11.9      0.26   1.5e+02      19     105 ..      13      88 ..       6     108 .. 0.45

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.26
   PF07926.7  19 iaaieeqiqklkdDlenqaeiareaqdkYerelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeksmLev 105
                 +a+++e+i++l+++l +q ++++ea            et  +L++++k+l+++q++++e +k  +   +e+++l  +    +++L+ 
  MMETSP1325-20131115|8398_1  13 QATMQEKISSLQEELTAQYKSSAEAA-----------ETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDS 88 
                 44444444444444444444444332...........23334444444444444444444444444444444444444333333333 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   2.0     0.033        19      42     121 ..      10      88 ..       5      91 .. 0.80
   2 ?    6.1   1.0     0.015       8.4      72     122 ..      92     142 ..      68     144 .] 0.81

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.033
   PF07889.7  42 adAvasvtkqlekvseavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLeskles 121
                 ++A a++ +++ +++e++++  k  s++  +   kl+e ++  ++ + ++te ++  + + e+ ++l++    L++ l+s
  MMETSP1325-20131115|8398_1  10 QQAQATMQEKISSLQEELTAQYK-SSAEAAETKLKLNEAEKALDSCQAQLTESEKGYEVLAEENEKLTTSNGLLQKELDS 88 
                 57888999999999999976555.57778888999999999999999999999999999999999988877777777766 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.015
   PF07889.7  72 nlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLesklesl 122
                  l +k +e++++  e    v+++ ed +a+  +++++++++ +++ +l+  
  MMETSP1325-20131115|8398_1  92 LLAKKEEECTALRAENDAFVMRMLEDKAAMVAEMNKMNDLIVQMKAQLAAY 142
                 4667888999999999999*************************9999765 PP

>> PF13093.1  Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   8.0     0.092        53     114     209 ..      14      95 ..       3     138 .. 0.56

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.092
   PF13093.1 114 lsneelIaeLPeeweeeesnasaspeeaerYdelrerLielskerqqkqerlaqlrqLkell....epfdsdqe..........niqpnLvtkdgeLeaElermrmLvak 209
                  + +e+I++L e                        +L +  k  +++ e   +l++ ++ l           +          +  ++L t++g L++El+ +r L+ak
  MMETSP1325-20131115|8398_1  14 ATMQEKISSLQE------------------------ELTAQYKSSAEAAETKLKLNEAEKALdscqA----QLTesekgyevlaEENEKLTTSNGLLQKELDSVRGLLAK 95 
                 333334444443........................3333333333333333333333333322221....111222233343333447888888888888888888887 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   4.3     0.099        56      49      99 ..      10      60 ..       6      70 .. 0.64
   2 ?    6.8   2.0      0.01       5.8      66      93 ..     111     142 ..      62     144 .] 0.70

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.099
                HHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17 49 qaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelek 99
                q+ + +++++I+++ ++     +  ae++e k +l+++e++l+  +a+l++
  MMETSP1325-20131115|8398_1 10 QQAQATMQEKISSLQEELTAQYKSSAEAAETKLKLNEAEKALDSCQAQLTE 60
                444555556666666655555666667777777777777777777766654 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.01
                 .....HHCCCHHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  66 k....edaeeliaevkelkeelkaleaelkel 93 
                      ed+++++ae++++++ + +++a+l++ 
  MMETSP1325-20131115|8398_1 111 VmrmlEDKAAMVAEMNKMNDLIVQMKAQLAAY 142
                 033348999*******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1585  (0.11593); expected 273.4 (0.02)
Passed bias filter:                      747  (0.0546372); expected 273.4 (0.02)
Passed Vit filter:                        97  (0.00709479); expected 13.7 (0.001)
Passed Fwd filter:                        31  (0.00226741); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.78u 0.37s 00:00:01.14 Elapsed: 00:00:00.59
# Mc/sec: 584.87
//
Query:       MMETSP1325-20131115|8400_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.32s 00:00:00.68 Elapsed: 00:00:00.45
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|8402_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-07   28.3   1.1    1.3e-06   27.7   0.8    1.3  1  PF01502.13 Phosphoribosyl-AMP cyclohydrolase


Domain annotation for each model (and alignments):
>> PF01502.13  Phosphoribosyl-AMP cyclohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.8   9.6e-11   1.3e-06      39      73 ..       2      40 ..       1      42 [. 0.87

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 9.6e-11
                -EEEEEEEE-----EEEEEEEE---...----.---SS- CS
  PF01502.13 39 vqkvkeirlDCDqDalllkveqkga...aCHt.grrsCF 73
                 q++++i lDCD+Da+ ++v q+g+   +CH  g+ +C+
  MMETSP1325-20131115|8402_1  2 WQDLHRIDLDCDSDAIRFTVVQNGSpacFCHRpGHYTCW 40
                699********************9985459986799998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 426.02
//
Query:       MMETSP1325-20131115|8401_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-05   22.8   0.0    7.2e-05   22.1   0.0    1.2  1  PF00388.14 Phosphatidylinositol-specific phospholipase C, X domain


Domain annotation for each model (and alignments):
>> PF00388.14  Phosphatidylinositol-specific phospholipase C, X domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   5.3e-09   7.2e-05      30      95 ..      67     131 ..      56     150 .. 0.87

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 5.3e-09
  PF00388.14  30 eayrqvLlaGcRcvEidvwdgkdeepivlHgytltkeikfrdvleaikeyafktselpvilslenh 95 
                 +++  +L  G R ++++  +++d+++i++Hg + + + +f d ++++ + a+ ++++ v+l l + 
  MMETSP1325-20131115|8401_1  67 TGFGGQLACGARAFDLRPYQKDDGSLIMHHGDVKV-DYSFTDAVQEVVDWANSNTDELVLLYLSHF 131
                 55667899************************999.**************************9864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.57
# Mc/sec: 1351.05
//
Query:       MMETSP1325-20131115|8403_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 686.65
//
Query:       MMETSP1325-20131115|8406_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 349.87
//
Query:       MMETSP1325-20131115|8404_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-32  111.2   0.7    1.8e-11   43.5   0.0    3.3  3  PF03174.8 Chitobiase/beta-hexosaminidase C-terminal domain
    5.2e-27   93.3   1.1    6.9e-09   35.2   0.0    3.4  3  PF13290.1 Chitobiase/beta-hexosaminidase C-terminal domain
    1.2e-22   79.6   0.3    8.1e-07   28.9   0.0    4.0  3  PF13287.1 Fn3 associated


Domain annotation for each model (and alignments):
>> PF03174.8  Chitobiase/beta-hexosaminidase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.0     4e-15   1.8e-11       1      72 [.      60     136 ..      60     139 .. 0.85
   2 !   36.9   0.0   4.7e-13   2.2e-09       3      74 ..     149     227 ..     147     228 .. 0.82
   3 !   27.7   0.1   3.3e-10   1.5e-06       2      42 ..     237     277 ..     236     280 .. 0.90

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 4e-15
   PF03174.8   1 ptptaspaaGtyde.gqkvtltsdtpgaeIyYTtDGsePttssllYt.gp.ieitettt..ikaiavddggndsdvv 72 
                 +tp+++pa Gt     + v++ ++tpga I+YT DGseP +s    t g  +  +  +t  ++a+a+++g   s+v+
  MMETSP1325-20131115|8404_1  60 ATPVFDPADGTSAVmTIFVRIDCETPGAVIRYTNDGSEPNESAAPLTpGSgFYWSHVGTtlFRARAFRNGFVPSEVA 136
                 58********88888************************8887444435448888877779*********9999987 PP

  == domain 2    score: 36.9 bits;  conditional E-value: 4.7e-13
   PF03174.8   3 ptaspaaGtydegqkvtltsdtpgaeIyYTtDGsePtts...s.llYt.gpieitettt..ikaiavddggndsdvvtf 74 
                 p  spa+Gt+  ++++ lt++ pga +yY++DG+   ++     ++ + + + +++ +t  ++++av+d++  sd+v++
  MMETSP1325-20131115|8404_1 149 PAISPAGGTFVGAVTIVLTCESPGARLYYSLDGGAVAPDdegAlSVASgETLVLDTPGTflLRVVAVSDDMAPSDTVSA 227
                 789*******************************9944412122444524588877777*****************997 PP

  == domain 3    score: 27.7 bits;  conditional E-value: 3.3e-10
   PF03174.8   2 tptaspaaGtydegqkvtltsdtpgaeIyYTtDGsePttss 42 
                 +p +sp+  t+  +  + l++ t+ga+IyYT DGseP++ss
  MMETSP1325-20131115|8404_1 237 APHFSPELSTFPLSAVLLLSTPTEGATIYYTDDGSEPSASS 277
                 688899999999998999*******************9887 PP

>> PF13290.1  Chitobiase/beta-hexosaminidase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.0   1.5e-12   6.9e-09       9      65 ..      75     135 ..      66     137 .. 0.75
   2 !   27.6   0.0   3.7e-10   1.7e-06       1      67 []     153     226 ..     153     226 .. 0.75
   3 !   27.5   0.2   3.8e-10   1.7e-06      12      36 ..     253     277 ..     242     282 .. 0.86

  Alignments for each domain:
  == domain 1    score: 35.2 bits;  conditional E-value: 1.5e-12
   PF13290.1   9 nqkvtlstatpgatIyYTtDGsePttss.lkYtgp...ieit..etttvkaiavdpggnssav 65 
                 ++ v++ ++tpga I+YT DGseP++s  ++   p   +  +  +tt ++a+a+++g   s+v
  MMETSP1325-20131115|8404_1  75 TIFVRIDCETPGAVIRYTNDGSEPNESAaPLT--PgsgFYWShvGTTLFRARAFRNGFVPSEV 135
                 6789*********************9773444..22246665435566*******99877877 PP

  == domain 2    score: 27.6 bits;  conditional E-value: 3.7e-10
   PF13290.1   1 pasgtydsnqkvtlstatpgatIyYTtDGsePttssl....kY.tgpiei..tetttvkaiavdpggnssavvt 67 
                 pa+gt+  + +++l++++pga  yY++DG    ++ +    +   + + +  ++t  ++++av++++  s++v+
  MMETSP1325-20131115|8404_1 153 PAGGTFVGAVTIVLTCESPGARLYYSLDGGAVAPDDEgalsVAsGETLVLdtPGTFLLRVVAVSDDMAPSDTVS 226
                 78899999**********************999864422222222344441145555*********99999986 PP

  == domain 3    score: 27.5 bits;  conditional E-value: 3.8e-10
   PF13290.1  12 vtlstatpgatIyYTtDGsePttss 36 
                 + lst+t+gatIyYT DGseP++ss
  MMETSP1325-20131115|8404_1 253 LLLSTPTEGATIYYTDDGSEPSASS 277
                 6699******************876 PP

>> PF13287.1  Fn3 associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   1.8e-10   8.1e-07       1      57 [.      78     138 ..      78     140 .. 0.74
   2 !   19.3   0.0   1.8e-07   0.00081       2      59 .]     165     229 ..     164     229 .. 0.77
   3 !   26.2   0.3   1.2e-09   5.7e-06       3      25 ..     255     277 ..     253     281 .. 0.90

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 1.8e-10
   PF13287.1   1 vtLtsetdgaeIyYTlDGsdPttsstlYt..gpIeikk.tttl.kaiavddggnssdvvta 57 
                 v + +et+ga I+YT DGs+P++s+   t  + +  +  +ttl +a a+++g   s+v+ a
  MMETSP1325-20131115|8404_1  78 VRIDCETPGAVIRYTNDGSEPNESAAPLTpgSGFYWSHvGTTLfRARAFRNGFVPSEVAAA 138
                 78999****************86555433334444433466666*******9999999876 PP

  == domain 2    score: 19.3 bits;  conditional E-value: 1.8e-07
   PF13287.1   2 tLtsetdgaeIyYTlDGsdPttsstlYtgpIeikkttt..........lkaiavddggnssdvvtatY 59 
                  Lt+e +ga  yY lDG       +  +g++ + ++ t          l+++av+d+++ sd+v+a++
  MMETSP1325-20131115|8404_1 165 VLTCESPGARLYYSLDGGAVA---PDDEGALSVASGETlvldtpgtflLRVVAVSDDMAPSDTVSAEF 229
                 79***************9774...3345666666655555555555558***************9976 PP

  == domain 3    score: 26.2 bits;  conditional E-value: 1.2e-09
   PF13287.1   3 LtsetdgaeIyYTlDGsdPttss 25 
                 L+++t+ga+IyYT DGs+P++ss
  MMETSP1325-20131115|8404_1 255 LSTPTEGATIYYTDDGSEPSASS 277
                 8999***************9766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 1320.26
//
Query:       MMETSP1325-20131115|8405_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-53  181.7  15.6    1.3e-53  181.4  10.8    1.0  1  PF05216.8 UNC-50 family
  ------ inclusion threshold ------
      0.032   12.7   0.2       0.04   12.3   0.1    1.1  1  PF05999.6 Herpesvirus U5-like family


Domain annotation for each model (and alignments):
>> PF05216.8  UNC-50 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.4  10.8   1.9e-57   1.3e-53      34     231 ..       3     206 ..       2     207 .] 0.92

  Alignments for each domain:
  == domain 1    score: 181.4 bits;  conditional E-value: 1.9e-57
   PF05216.8  34 kkvyrsikyrkqtknqyaRdDpsflvLlvvllvisavawgla.yse..slleilklivlvvlvdfllvglviatvlwlvanrllkakgsaksaseeevewayaFDvhcnaFlpifvllyvvqflllplltkksflsllvgntLylialgyYfyitflGYnalpflkntellLlpillllvlyllsl.....ilgfnvakklvelyf 231
                 +kvy+  +yrk+tknq+aRdDp f +++  +lv s++awg+a ++e  +++++l l+v  +l ++l+ g+v++ v+  +anr+l    +  +++ ++vew yaFD+hcn+F++ f++++vvq+++lpll  + + ++l++n+L+++a++ Yfy+t lGY alpfl++te  L+p++ +++ly++         +fn+++ +v++yf
  MMETSP1325-20131115|8405_1   3 QKVYKLANYRKKTKNQWARDDPGFALIQFGFLVASTLAWGIAcLQErlTVVRFLLLLVKEILGHWLVGGVVLSGVCASLANRYLI--LHSVHSVAQTVEWLYAFDIHCNSFFVSFLFTHVVQLMILPLLLGDGLTATLCANALWAMAMAAYFYVTHLGYCALPFLTKTEYYLYPVVGVVLLYVVFAflalaGYRFNMTRMVVSFYF 206
                 79**************************************994444346778888899999***********************9..588999**********************************************************************************9999999886644433457999*****9998 PP

>> PF05999.6  Herpesvirus U5-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   5.9e-06      0.04     188     239 ..      74     125 ..      68     163 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.9e-06
   PF05999.6 188 fslisqtlersrlplplgealgngpdekyvLylasNivlllflirtlravir 239
                 +s ++ +l +++l l  +  ++++++  y+  + +N+ ++ fl   + +++ 
  MMETSP1325-20131115|8405_1  74 LSGVCASLANRYLILHSVHSVAQTVEWLYAFDIHCNSFFVSFLFTHVVQLMI 125
                 67799***********9**************************999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       714  (0.0522235); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1033.43
//
Query:       MMETSP1325-20131115|8409_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        98  (0.00716793); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 165.90
//
Query:       MMETSP1325-20131115|8411_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.047   13.5   0.0      0.087   12.7   0.0    1.4  1  PF01535.15 PPR repeat


Domain annotation for each model (and alignments):
>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.3e-06     0.087       3      21 ..      23      41 ..      22      41 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 6.3e-06
  PF01535.15  3 ynslIsgyckaGkleeAle 21
                y +lI+ y+++G+++ A e
  MMETSP1325-20131115|8411_1 23 YKALINWYVRNGLYRHAHE 41
                889************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|8412_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0088   15.9   0.9      0.014   15.3   0.6    1.3  1  PF07197.7 Protein of unknown function (DUF1409)
  ------ inclusion threshold ------
      0.033   13.7   0.4      0.053   13.0   0.3    1.4  1  PF13376.1 Bacteriocin-protection, YdeI or OmpD-Associated
       0.11   11.1   0.0       0.12   11.0   0.0    1.0  1  PF07147.7 Mitochondrial 28S ribosomal protein S30 (PDCD9)
       0.39    9.9   5.2        1.7    7.9   3.6    2.1  1  PF03832.8 WSK motif


Domain annotation for each model (and alignments):
>> PF07197.7  Protein of unknown function (DUF1409)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.6   4.1e-06     0.014      20      46 ..      59      85 ..      57      87 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 4.1e-06
   PF07197.7 20 rLeeinaelaeelakladlpkaiEeqk 46
                r+e+i+a+lae+++k+a+ +k i  +k
  MMETSP1325-20131115|8412_1 59 RFEKIQAKLAEQEEKIAAYRKGIANEK 85
                9*****************999998777 PP

>> PF13376.1  Bacteriocin-protection, YdeI or OmpD-Associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   1.6e-05     0.053      33      63 .]      40      71 ..      33      71 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.6e-05
   PF13376.1 33 kailrwiq.saKrpeTRakRiakfvemlaegk 63
                k ++r+ +   Kr+ TR+ R++k+ ++lae++
  MMETSP1325-20131115|8412_1 40 KPVIRRPHkGHKRDRTRQERFEKIQAKLAEQE 71
                55566666567******************986 PP

>> PF07147.7  Mitochondrial 28S ribosomal protein S30 (PDCD9)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.4e-05      0.12      38      79 ..      37      78 ..      23      86 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.4e-05
   PF07147.7 38 vYppivasrtakskaakrreaeefaekvhaaptveekirlvs 79
                +++ +v +r++k + + r ++e+f++  +++++ eeki ++ 
  MMETSP1325-20131115|8412_1 37 SFKKPVIRRPHKGHKRDRTRQERFEKIQAKLAEQEEKIAAYR 78
                68899*******************9999999*******7765 PP

>> PF03832.8  WSK motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.6    0.0005       1.7       6      17 ..      34      45 ..      33      62 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0005
   PF03832.8  6 tWaSfKRLVTpR 17
                +W+SfK+ V++R
  MMETSP1325-20131115|8412_1 34 AWDSFKKPVIRR 45
                8********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       745  (0.0544909); expected 273.4 (0.02)
Passed bias filter:                      617  (0.0451287); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.89
# Mc/sec: 245.02
//
Query:       MMETSP1325-20131115|8413_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-12   46.7   1.1    2.1e-05   23.8   0.0    2.2  2  PF00515.23 Tetratricopeptide repeat
      7e-11   41.0   1.2    0.00027   20.5   0.2    2.2  2  PF07719.12 Tetratricopeptide repeat
    1.2e-09   37.0   0.4     0.0001   21.6   0.0    2.2  2  PF13181.1  Tetratricopeptide repeat
    1.3e-09   37.4   0.8    1.2e-08   34.3   0.5    2.0  1  PF13414.1  TPR repeat
    1.1e-08   34.7   1.2    2.4e-06   27.2   0.8    2.1  1  PF13424.1  Tetratricopeptide repeat
    1.3e-05   25.0   0.8      0.082   12.9   0.1    2.1  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    4.7e-05   23.8   0.1     0.0024   18.3   0.0    2.1  1  PF13432.1  Tetratricopeptide repeat
    6.6e-05   23.0   0.1      0.049   14.1   0.0    2.7  3  PF13428.1  Tetratricopeptide repeat
    0.00023   20.8   0.0      0.021   14.5   0.0    2.1  2  PF13371.1  Tetratricopeptide repeat
     0.0014   18.8   0.0        0.2   12.0   0.0    2.4  2  PF13174.1  Tetratricopeptide repeat
     0.0023   17.9   0.7       0.21   11.7   0.0    2.6  2  PF13431.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.039   13.6   0.2       0.15   11.8   0.1    1.9  2  PF13176.1  Tetratricopeptide repeat
      0.085   13.0   2.1       0.68   10.1   0.1    2.1  2  PF03704.12 Bacterial transcriptional activator domain
      0.094   12.5   0.1        1.4    8.8   0.0    2.2  2  PF13374.1  Tetratricopeptide repeat
       0.12   12.0   0.2       0.28   10.9   0.1    1.6  1  PF07720.7  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.1   8.5e-08   7.7e-05       6      30 ..       8      32 ..       6      36 .. 0.88
   2 !   23.8   0.0   2.3e-08   2.1e-05       2      27 ..      58      83 ..      57      89 .. 0.96

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 8.5e-08
                HHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23  6 nlGnaylklgkydeAleyyekALel 30
                + G+ y+ lg++++A++ ye+A ++
  MMETSP1325-20131115|8413_1  8 QVGHSYYLLGRHKQAIQVYEEAQKI 32
                569*******************998 PP

  == domain 2    score: 23.8 bits;  conditional E-value: 2.3e-08
                HHHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekA 27
                +++ n+G++y +++++  A+e +++A
  MMETSP1325-20131115|8413_1 58 EIWHNKGLCYIHMKQLGLAIESFKRA 83
                79***********************9 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.2     3e-07   0.00027       6      32 ..       8      34 ..       4      36 .. 0.87
   2 !   19.8   0.0   4.9e-07   0.00044       2      31 ..      58      87 ..      57      90 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 3e-07
                HHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12  6 nlGlayyklgdyeeAleafekAleldP 32
                + G +yy lg++++A++ +e+A ++  
  MMETSP1325-20131115|8413_1  8 QVGHSYYLLGRHKQAIQVYEEAQKIGE 34
                6799******************99865 PP

  == domain 2    score: 19.8 bits;  conditional E-value: 4.9e-07
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleld 31
                e+++n Gl+y++++++  A+e f++A +++
  MMETSP1325-20131115|8413_1 58 EIWHNKGLCYIHMKQLGLAIESFKRANAIQ 87
                89***********************97765 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.1   3.9e-05     0.035       8      30 ..      10      32 ..       5      36 .. 0.91
   2 !   21.6   0.0   1.1e-07    0.0001       2      32 ..      58      88 ..      54      91 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 3.9e-05
                --HHHHTT-HHHHHHHHH---HH CS
   PF13181.1  8 GdiYrqlGdydkAkeylekalel 30
                G+ Y  lG++++A++ +e+a ++
  MMETSP1325-20131115|8413_1 10 GHSYYLLGRHKQAIQVYEEAQKI 32
                899*****************998 PP

  == domain 2    score: 21.6 bits;  conditional E-value: 1.1e-07
                --TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelkp 32
                ++++n+G++Y  +++  +A+e++++a+ + +
  MMETSP1325-20131115|8413_1 58 EIWHNKGLCYIHMKQLGLAIESFKRANAIQR 88
                58*************************9976 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.5   1.3e-11   1.2e-08       4      65 ..       4      84 ..       1      88 [. 0.81

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 1.3e-11
   PF13414.1  4 ealkelGnalfkegdydeAieayekAleldpnnae....................lyynlAlaylklgkdyeeAledyekAl 65
                  lk+ G  ++ +g++++Ai+ ye+A ++ ++n                      ++ n +l+y+++  +   A+e +++A 
  MMETSP1325-20131115|8413_1  4 ANLKQVGHSYYLLGRHKQAIQVYEEAQKIGEENVRkrneagrqsgaarlsaddweIWHNKGLCYIHMK-QLGLAIESFKRAN 84
                578999***********************75555555555566666666666666************7.78*******9995 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.8   2.7e-09   2.4e-06       8      77 ..       6      88 ..       1      89 [. 0.78

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 2.7e-09
   PF13424.1  8 lnnlalvlrrlgdydeAlelyekalel.lrelgd......dhpdtara.......lnnlanlylalgdydeAleylekAleiae 77
                l + +++++ lg++++A++ ye+a ++  + ++        ++  ar+       ++n + +y +++++  A+e +++A +i +
  MMETSP1325-20131115|8413_1  6 LKQVGHSYYLLGRHKQAIQVYEEAQKIgEENVRKrneagrQSG-AARLsaddweiWHNKGLCYIHMKQLGLAIESFKRANAIQR 88
                4488999********************9998643334443222.23334567777************************99976 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.1     9e-05     0.082      30      57 ..       8      36 ..       1      45 [. 0.74
   2 !   11.2   0.0    0.0003      0.27      24      62 ..      56      93 ..      41      95 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9e-05
                HHHHHHHH---HHHHHHHHHC.TSHCHCB CS
   PF12895.2 30 alAlclylngeykrAyellrk.leldsss 57
                  + ++yl+g++k+A++++++ +++ +++
  MMETSP1325-20131115|8413_1  8 QVGHSYYLLGRHKQAIQVYEEaQKIGEEN 36
                55789*************98885555444 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.0003
                HHHCHHHHHHHHHH---HHHHHHHHHCTSHCHCBHHHHH CS
   PF12895.2 24 edaylyalAlclylngeykrAyellrkleldssslgcry 62
                + + +++++lc+ ++++   A+e +++ +   ++ ++ y
  MMETSP1325-20131115|8413_1 56 DWEIWHNKGLCYIHMKQLGLAIESFKRANAIQRH-DSTY 93
                4458*********************998887777.5555 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   2.6e-06    0.0024       4      58 ..      10      84 ..       7      91 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 2.6e-06
   PF13432.1  4 ArallraGdydeAlaaleaalala....................PeaaeallllaeallrlgrldeAaallraal 58
                +++++ +G+ ++A++++e+a +                       +++e++ + + ++ ++++l  A++ +++a 
  MMETSP1325-20131115|8413_1 10 GHSYYLLGRHKQAIQVYEEAQKIGeenvrkrneagrqsgaarlsADDWEIWHNKGLCYIHMKQLGLAIESFKRAN 84
                899*********************8888877666665555555544**********************9999975 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   5.4e-05     0.049       4      35 ..       6      37 ..       3      46 .. 0.84
   2 ?    2.0   0.0      0.43   3.9e+02      27      42 ..      49      64 ..      42      66 .. 0.82
   3 ?    5.8   0.0     0.025        23       2      33 ..      58      89 ..      57      95 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.4e-05
   PF13428.1  4 llalarallalGdpdeAiallrralalaPdda 35
                l + ++ +  lG++++Ai+++++a + + ++ 
  MMETSP1325-20131115|8413_1  6 LKQVGHSYYLLGRHKQAIQVYEEAQKIGEENV 37
                5678899*****************98888876 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.43
   PF13428.1 27 alalaPddaealllLa 42
                a++l+ dd+e++++ +
  MMETSP1325-20131115|8413_1 49 AARLSADDWEIWHNKG 64
                6678899*****9876 PP

  == domain 3    score: 5.8 bits;  conditional E-value: 0.025
   PF13428.1  2 eallalarallalGdpdeAiallrralalaPd 33
                e +   +  ++++ ++  Ai+ ++ra a + +
  MMETSP1325-20131115|8413_1 58 EIWHNKGLCYIHMKQLGLAIESFKRANAIQRH 89
                567777889****************9665554 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.028        26      36      55 ..      10      29 ..       2      46 .. 0.80
   2 !   14.5   0.0   2.3e-05     0.021      23      59 ..      51      87 ..      46      94 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.028
   PF13371.1 36 GlllaqlgclaaAaedLeaf 55
                G  ++ lg++ +A++ +e +
  MMETSP1325-20131115|8413_1 10 GHSYYLLGRHKQAIQVYEEA 29
                6679**********988876 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 2.3e-05
   PF13371.1 23 llaPddpyerRDrGlllaqlgclaaAaedLeaflelc 59
                +l+ dd++ +   Gl++ ++ +l  A+e + ++ +  
  MMETSP1325-20131115|8413_1 51 RLSADDWEIWHNKGLCYIHMKQLGLAIESFKRANAIQ 87
                6889************************999876555 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00022       0.2       6      26 ..       9      29 ..       8      32 .. 0.88
   2 ?    4.6   0.0     0.051        46       5      25 ..      62      82 ..      58      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00022
                HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAlealerl 26
                 + syy lg++ +A++++e+ 
  MMETSP1325-20131115|8413_1  9 VGHSYYLLGRHKQAIQVYEEA 29
                588****99**********86 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.051
                HHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAlealer 25
                + +l+y+ +++   A+e ++r
  MMETSP1325-20131115|8413_1 62 NKGLCYIHMKQLGLAIESFKR 82
                679*****99********998 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1      0.06        54      18      34 .]       8      24 ..       1      24 [. 0.77
   2 !   11.7   0.0   0.00023      0.21       6      33 ..      50      77 ..      49      78 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.06
   PF13431.1 18 nLAelllnnGdleeAeq 34
                + +  ++ +G++++A+q
  MMETSP1325-20131115|8413_1  8 QVGHSYYLLGRHKQAIQ 24
                5578899********98 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00023
   PF13431.1  6 leldPnnadaynnLAelllnnGdleeAe 33
                 +l+ ++++ ++n+++++   ++l  A+
  MMETSP1325-20131115|8413_1 50 ARLSADDWEIWHNKGLCYIHMKQLGLAI 77
                578899*************999998887 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00016      0.15       6      27 ..      10      29 ..       6      38 .. 0.79
   2 ?   -1.2   0.0       2.4   2.2e+03      18      24 ..      76      82 ..      66      91 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00016
   PF13176.1  6 arlysrlgdyekAielyeraLa 27
                ++ y  lg++++Ai++ye+  a
  MMETSP1325-20131115|8413_1 10 GHSYYLLGRHKQAIQVYEE--A 29
                5667789***********9..5 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 2.4
   PF13176.1 18 Aielyer 24
                Aie ++r
  MMETSP1325-20131115|8413_1 76 AIESFKR 82
                5666666 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00075      0.68     105     124 ..      12      31 ..       6      36 .. 0.86
   2 ?    3.1   0.1      0.11        97      12      39 ..      36      63 ..      32      81 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00075
  PF03704.12 105 AlyrsGrqaeALevYrrlrr 124
                 ++y +Gr+++A++vY+++++
  MMETSP1325-20131115|8413_1  12 SYYLLGRHKQAIQVYEEAQK 31 
                 89**************9876 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.11
  PF03704.12 12 agrralaagdpeeaarlleaalalwrGp 39
                + r++ +ag++++aarl ++  ++w+ +
  MMETSP1325-20131115|8413_1 36 NVRKRNEAGRQSGAARLSADDWEIWHNK 63
                567888999********99999999976 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0    0.0015       1.4       8      31 ..       9      32 ..       6      35 .. 0.88
   2 ?    1.3   0.0      0.35   3.2e+02       6      33 ..      61      88 ..      59      89 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0015
   PF13374.1  8 LAlalrargryeeAlaleeealai 31
                ++  ++ +gr+ +A + +eea+ i
  MMETSP1325-20131115|8413_1  9 VGHSYYLLGRHKQAIQVYEEAQKI 32
                57789****************987 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.35
   PF13374.1  6 nnLAlalrargryeeAlaleeealairr 33
                +n +l +  +++++ A + + +a ai+r
  MMETSP1325-20131115|8413_1 61 HNKGLCYIHMKQLGLAIESFKRANAIQR 88
                5778999999999999999999999998 PP

>> PF07720.7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1    0.0003      0.28       4      36 .]       6      36 ..       4      36 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.0003
                HHHHHHHHHHTT-HHHHHHH..HHHHHHH-TT- CS
   PF07720.7  4 lyslAaefynkkkyqeArelfsYallaildken 36
                l+ ++ ++y+ ++  +A+++  Y+ ++++ +en
  MMETSP1325-20131115|8413_1  6 LKQVGHSYYLLGRHKQAIQV--YEEAQKIGEEN 36
                6677889*************..99999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|8407_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 1666.80
//
Query:       MMETSP1325-20131115|8415_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 325.22
//
Query:       MMETSP1325-20131115|8414_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-17   63.3   0.1    2.7e-17   62.9   0.1    1.2  1  PF07859.8  alpha/beta hydrolase fold
      1e-10   40.8   0.0    1.2e-10   40.6   0.0    1.1  1  PF00135.23 Carboxylesterase family
    5.8e-09   35.3   0.1    1.1e-08   34.5   0.0    1.5  2  PF00326.16 Prolyl oligopeptidase family
    2.5e-08   33.9   2.4    3.8e-08   33.4   1.6    1.2  1  PF12697.2  Alpha/beta hydrolase family
    4.6e-07   29.5   0.2    7.1e-07   28.9   0.2    1.2  1  PF12695.2  Alpha/beta hydrolase family
     0.0013   17.3   0.0     0.0018   16.8   0.0    1.1  1  PF10340.4  Protein of unknown function (DUF2424)
  ------ inclusion threshold ------
       0.03   13.6   0.0      0.069   12.4   0.0    1.5  2  PF02230.11 Phospholipase/Carboxylesterase


Domain annotation for each model (and alignments):
>> PF07859.8  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.1   1.4e-20   2.7e-17       1     177 [.      44     216 ..      44     231 .. 0.77

  Alignments for each domain:
  == domain 1    score: 62.9 bits;  conditional E-value: 1.4e-20
                 EEEE------SS-TGGGHHHHHHHHHHHTSEEEEEE---T.TTS-TTHHHHHHHHHHHHHHHTTTTHTCCCCEEEEE-------HHHHHH.HHHHH-----EEEEEEES----T.S-CHHHHHH.THHCTSTTSS-HHHHHHHHHHHSS.GGGGGSTTTSGGGSS-HTT---EEEEEEEE- CS
   PF07859.8   1 llyfHGGGfvlgsadthdalcrrlakelgavvvsvdYrlA.PehrfPaavedalaalrwlaeqawelgadpsrivvaGdSaGGnLaaava.lrardegepeiaaqvliyPgtdl.ertesesqelaeeladgplltrdamdlfwrlylp.eadrddplaspllasdlsglpptlvvvaelD 177
                 l+ +HGGG+ +gs+    ++  +la +l+ +vv  +Yrl    +r    v d+l+ l+w++ + +++g+d+++i+++G SaG++La+ ++ l  +d+++  ++++v  y +tdl +     +q   ++l+   + +r+a++ +     p  a+ +  ++sp+++    + ppt+++ + +D
  MMETSP1325-20131115|8414_1  44 LVSLHGGGWYSGSMYDGLQCYLSLALNLEFAVVTSEYRLGqRGWRGRDMVADVLDLLKWIRVNGERKGLDKDKIIIMGGSAGAHLAMTASyLLNKDAKKLVVKGVVARYGATDLaK-A--WAQ--PQSLQR-GWSERKAIEHITGG-DPtSAASEYSYLSPVHH-VGPNTPPTVLLHCRQD 216
                 6889************************************6679*******************99***********************9977778887888***********9931.2..222..222222.22234444432222.22344444557777765.4556677776666555 PP

>> PF00135.23  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.0   6.3e-14   1.2e-10     122     238 ..      38     147 ..      14     174 .. 0.81

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 6.3e-14
                 STS--EEEE----------TTSGGGHHHHHHHHHT-EEEEE----TT-------HHTC--TT---HHHHHHHHHHHHHGGG----TTSEEEE------HHHHHHHHT..CCGGCC-SEE CS
  PF00135.23 122 skklPVmVwIhGGgfqsgsaslddydgselaasenvivVtinYRlGalGFlslgdseappgNaGllDqvlALrWVkenIaaFGGDpnnvTlfGesAGaasvslllls..pqsrglfhra 238
                    lPV+V  hGGg +sgs    +    +la + +  vVt  YRlG  G+   g +  +       D++  L+W++ n ++ G D++++ ++G sAGa++++  +    +++++l+ + 
  MMETSP1325-20131115|8414_1  38 DGLLPVLVSLHGGGWYSGSMYDGLQCYLSLALNLEFAVVTSEYRLGQRGWR--GRDMVA-------DVLDLLKWIRVNGERKGLDKDKIIIMGGSAGAHLAMTASYLlnKDAKKLVVKG 147
                 2389***************944555567899999****************9..444444.......99999***************************988766555446667776554 PP

>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.9   3.8e+03      12      34 ..      37      59 ..      33      62 .. 0.79
   2 !   34.5   0.0   5.4e-12   1.1e-08      38     156 ..      89     217 ..      65     239 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.9
                H----EEEE----------TTT- CS
  PF00326.16 12 drGyvvvvanirGsggyGekwhd 34
                + G   v++ ++G+g y+ + +d
  MMETSP1325-20131115|8414_1 37 KDGLLPVLVSLHGGGWYSGSMYD 59
                567777999999*9999988877 PP

  == domain 2    score: 34.5 bits;  conditional E-value: 5.4e-12
                 GGGGHHHHHHHHHHHHHHHH-----GGGEEE--------HHHHH...HH..H-GGG---EEEE-----TTTGGGS-......---GGGGT---TTS...HHH.HHHHHHH-GGG-------EEEEEETT-S CS
  PF00326.16  38 rklgqnefdDfiaaaealakegyvdpdrlaitGgSyGGylvgaa...ln..qrpdlFkaavaqvgvvdwltymsdtsl....lteaeymeygnpee...neegyeelspyspadnvkaypplllihGeeDd 156
                 ++   +++ D++++++   +++  d+d+++i+GgS+G +l+++a   ln   ++ + k++va +g +d+ + + +++     + e +  e+ +  +      +y++lsp++++    ++pp+ l+h  +D+
  MMETSP1325-20131115|8414_1  89 GRDMVADVLDLLKWIRVNGERKGLDKDKIIIMGGSAGAHLAMTAsylLNkdAKKLVVKGVVARYGATDLAKAWAQPQSlqrgWSERKAIEHITGGDptsAASEYSYLSPVHHVGP--NTPPTVLLHCRQDE 217
                 4455667889999999999*******************98876633356423344689**************9999887889777666666555552116666666666666666..*********99996 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   1.6   1.9e-11   3.8e-08       2     203 ..      45     233 ..      44     254 .. 0.73

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 1.9e-11
                 EE--------.----HHHHHHT....TTSEEEEE-----------S...S--HHHHHHHHHHHHHH--.......--EEEE--------HHHHHH----.EEEEEEE------STT---TTHHHHHHHHHH----....--H..HHHHH-----HHHHHH--GGGG....GG------HHHHTT--S-EEEEE-----HHH....HHHHHHHHHHST CS
   PF12697.2   2 vllHGlggsa.eswrplaeaLa....agyrvvapDlpGhGrSdrppdydpdtledlaadlaalldalgl......rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpasalrpagpsllrrllagraaalrdlaarafarlfdgdelealvradaaalaellraalldadlrealarldvPvlviageaDrvvp....peearrlaealp 203
                 v lHG+g+ + ++++ l+ +L+      + vv+ +++  G+  +      +++  ++ dl+++++  g       ++++++G S G+ +a+ a  +  ++ ++lv+ ++++       r+   +l++++++ ++   r++++r+  ++++g ++ + + ++            +  ++ ++++  + P+ ++++++D++ +    +   + l++al 
  MMETSP1325-20131115|8414_1  45 VSLHGGGWYSgSMYDGLQCYLSlalnLEFAVVTSEYR-LGQRGWRG----RDMVADVLDLLKWIRVNGErkgldkDKIIIMGGSAGAHLAMTASYLLNKDAKKLVVKGVVA-------RYGATDLAKAWAQPQS-LQRGWSERKAIEHITGGDPTSAASEY------------SYLSPVHHVGPNTPPTVLLHCRQDEFYSadvhA---DGLKRALQ 233
                 5689887666377777888887655359*******99.56666632....35566666666666665559999989***********************************.......9877777776655433.34677778888888766666555432............4445567788889************99974444...44444443 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.2   3.7e-10   7.1e-07       2     122 ..      44     226 ..      43     252 .. 0.69

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 3.7e-10
   PF12695.2   2 vvlvhGagg.dssayeplae..alakr.gfavvavdlpghgas.egaaaakrvl..........aadll...dleriilvGhSlGGgvalelag...rddrvkglvllap...f..pd.gedlakltl........................................pvllihGtrDgvvppeeaek 122
                 +v +hG+g  ++s y +l     la +  favv+ +++  ++   g++ +++vl          +       d ++ii++G S+G+++a+++     +  ++k+lv+ +    +  +d  +++a+ +                                         p+ l+h  +D++ +++ +++
  MMETSP1325-20131115|8414_1  44 LVSLHGGGWySGSMYDGLQCylSLALNlEFAVVTSEYRLGQRGwRGRDMVADVLdllkwirvngE---RkglDKDKIIIMGGSAGAHLAMTASYllnK--DAKKLVVKGVvarYgaTDlAKAWAQPQSlqrgwserkaiehitggdptsaaseysylspvhhvgpntpPTVLLHCRQDEFYSADVHAD 226
                 67789988735566666655225555557888888887555533777777777755566676653...0445889****************7776541..55555544442222223333344433335666777777888888999999999999999999999999***********998776555 PP

>> PF10340.4  Protein of unknown function (DUF2424)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   9.2e-07    0.0018     123     230 ..      42     150 ..      27     161 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 9.2e-07
   PF10340.4 123 pvllylHGGgfalklipvtlvfLsn.lrklfp.dmailvsDYtvtaakdqskkYplqvleslavydylvkskgfk..nvvvlGdSaGGnlvLslllklsklnkvvlPkkaia 230
                 pvl+ lHGGg+       +  +L+  l  +++ + a++ s+Y + +    + + +  vl+ l+   +  + kg+   +++++G SaG  l ++  + l+k  k+++ k+++a
  MMETSP1325-20131115|8414_1  42 PVLVSLHGGGWY---SGSMYDGLQCyLSLALNlEFAVVTSEYRLGQRGWRGRDMVADVLDLLKWIRVNGERKGLDkdKIIIMGGSAGAHLAMTASYLLNKDAKKLVVKGVVA 150
                 9*********85...55555555541334556688**********************************999985337***************************9999986 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.5e-05     0.069      99     149 ..     109     164 ..      96     172 .. 0.81
   2 ?   -3.5   0.0       2.6   5.1e+03     157     168 ..     207     218 ..     199     223 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.5e-05
  PF02230.11  99 kkgipssriiigGFSqGaalalylaltspk.....plggivafsgalplnqkleqs 149
                 +kg+++++iii+G S Ga la+ +++ ++k      + g+va  ga  l++ ++q 
  MMETSP1325-20131115|8414_1 109 RKGLDKDKIIIMGGSAGAHLAMTASYLLNKdakklVVKGVVARYGATDLAKAWAQP 164
                 5789*****************99888776655534568999999999999999874 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 2.6
  PF02230.11 157 pilqlHgeeDev 168
                 p+++lH+ +De 
  MMETSP1325-20131115|8414_1 207 PTVLLHCRQDEF 218
                 889999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 1549.98
//
Query:       MMETSP1325-20131115|8416_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.8    6.5   8.8       0.48   10.1   0.5    2.4  2  PF09579.5 Sporulation protein YtfJ (Spore_YtfJ)


Domain annotation for each model (and alignments):
>> PF09579.5  Sporulation protein YtfJ (Spore_YtfJ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   1.2     0.049   6.7e+02      19      48 ..       8      33 ..       1      56 [. 0.62
   2 ?   10.1   0.5   3.5e-05      0.48      19      50 ..     109     139 ..     104     140 .. 0.67

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.049
   PF09579.5 19 gaGggefkkkkkekekgfggGsGaGvsieP 48
                +aGg  ++         ++g++Ga +  +P
  MMETSP1325-20131115|8416_1  8 AAGGAAGAAAV----GASAGAAGAAAAAKP 33
                44444444433....445666666666655 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 3.5e-05
   PF09579.5  19 gaGggefkkkkkekekgfggGsGaGvsiePvA 50 
                 g++ +  ++++ +++++ g G+GaGv++ P++
  MMETSP1325-20131115|8416_1 109 GTSTSTSSSNT-SSTSSMGAGAGAGVGLAPIS 139
                 33333333333.55677************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       777  (0.0568315); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.40s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 779.99
//
Query:       MMETSP1325-20131115|8418_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 294.29
//
Query:       MMETSP1325-20131115|8421_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.66
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|8422_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.96    9.0   6.9        1.1    8.9   4.8    1.1  1  PF01456.12 Mucin-like glycoprotein
        1.7    8.5  11.0        1.8    8.4   5.0    2.3  2  PF14408.1  Ribosomally synthesized peptide in actinomycetes


Domain annotation for each model (and alignments):
>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.8   0.00016       1.1      59     110 ..      11      52 ..       3      72 .. 0.47

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00016
  PF01456.12  59 tttttasttittkttkattttttttttttateaPsdavttaeaPtttttrap 110
                  t t + t ++t+tt+at t +   ++   + aPs          + t ra 
  MMETSP1325-20131115|8422_1  11 STDTGSNTNTDTNTTRATDTDADGGRADRRARAPS----------PATIRAS 52 
                 12221222234444555555555555555555555..........5444432 PP

>> PF14408.1  Ribosomally synthesized peptide in actinomycetes
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.0   0.00027       1.8      22      55 ..       2      33 ..       1      41 [. 0.81
   2 ?    1.8   0.1     0.031   2.1e+02      40      59 .]      52      76 ..      38      76 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00027
   PF14408.1 22 GqvvemgKhgTsttsetstttspDgqnqqdsdsd 55
                G +v+ g  +T t+s+t+t t+    +++d+d d
  MMETSP1325-20131115|8422_1  2 GAIVPAGANSTDTGSNTNTDTN--TTRATDTDAD 33
                78999***************95..5555577666 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.031
   PF14408.1 40 tttsp.Dgqn....qqdsdsdtteD 59
                ++t++  +++    q++++sd t+D
  MMETSP1325-20131115|8422_1 52 SVTENrRSASidlgQGGRASDLTQD 76
                4444333333444568999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 344.20
//
Query:       MMETSP1325-20131115|8419_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.8    7.8   8.4          1    7.4   5.9    1.2  1  PF00171.17 Aldehyde dehydrogenase family
        1.3    6.5   4.4        1.4    6.4   3.1    1.1  1  PF05758.7  Ycf1


Domain annotation for each model (and alignments):
>> PF00171.17  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.9   0.00015         1      28      73 ..      44      89 ..      15     141 .. 0.65

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00015
                HHHHHHHHHHHHHHHHHHCTS-HHHHHHHHHHHHHHHHHTHHHHHH CS
  PF00171.17 28 aedvdaavaaAkaafkawaklpaeeRaeilrkaadlleerrdelae 73
                +++ +a ++aAkaa++a++k +  + a+il++a+d+++++++e  e
  MMETSP1325-20131115|8419_1 44 ERQKQAEIEAAKAAQEAFEKAQGDREARILLAAQDIIKRKQEEKKE 89
                34566679999999************************88877433 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   3.1    0.0002       1.4     229     297 ..      28     112 ..       3     179 .. 0.52

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0002
   PF05758.7 229 lseieer........seeekkkeieaesekkrakqeqeeeeeedsslaseekedkdkideqeekkveek.............kekesilk 297
                 +++ eer         e++k++eiea++++++a ++ +++ e+   ++      +d i++++e+k+e +             ++  ++  
  MMETSP1325-20131115|8419_1  28 ARKKEERrkrraeaeVERQKQAEIEAAKAAQEAFEKAQGDREAR--IL---LAAQDIIKRKQEEKKERAkarflprllgmrvRQAVEHAA 112
                 22222221111110022222222222222222222222222222..11...122233333333333333345666666666533333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1579  (0.115492); expected 273.4 (0.02)
Passed bias filter:                      582  (0.0425688); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.42s 00:00:01.12 Elapsed: 00:00:00.61
# Mc/sec: 907.47
//
Query:       MMETSP1325-20131115|8425_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0087   16.3   3.0      0.011   16.0   2.1    1.2  1  PF13865.1  C-terminal duplication domain of Friend of PRMT1
  ------ inclusion threshold ------
      0.015   14.7   0.4      0.017   14.6   0.3    1.0  1  PF04546.8  Sigma-70, non-essential region


Domain annotation for each model (and alignments):
>> PF13865.1  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   2.1   1.6e-06     0.011       8      58 ..       9      58 ..       4      72 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.6e-06
   PF13865.1  8 rggkfrprgrgarrgrsrgrggRkgrgkkkkrkkvtredLDkeLDqYMstt 58
                + ++++++g g + g+++g g+R   g+++ +++   ed D+eLD  M+  
  MMETSP1325-20131115|8425_1  9 SDRRKGSGGVGYFDGGGGGGGDRA-HGNADSEEEEEEEDSDAELDAMMEEL 58
                444555589999999999999999.688888***************99765 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.3   2.4e-06     0.017      51     102 ..      36      89 ..      25     106 .] 0.62

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2.4e-06
   PF04546.8  51 eeeddddddededeee....eseeadegpdpeearerFaelrkqyeklekalekeg 102
                 ++++  +++e+ed+++      ee   g+dpe ar + +++++  e++ ++l+ ++
  MMETSP1325-20131115|8425_1  36 ADSE--EEEEEEDSDAeldaMMEELGMGEDPELARIQAEAMAAMQEQAAHVLAAQN 89 
                 2222..2222222222445567788899*******999999998888888875554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       636  (0.0465184); expected 273.4 (0.02)
Passed bias filter:                      474  (0.0346694); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 488.49
//
Query:       MMETSP1325-20131115|8424_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-23   83.4   0.6    1.7e-23   83.0   0.4    1.2  1  PF03198.9 Glucanosyltransferase


Domain annotation for each model (and alignments):
>> PF03198.9  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   0.4   1.2e-27   1.7e-23     206     314 ..       4     131 ..       1     132 [. 0.88

  Alignments for each domain:
  == domain 1    score: 83.0 bits;  conditional E-value: 1.2e-27
                 --S-E-EE-------.--------HHHHHHH----S-EEEEEB---SSS..............S---THHHHH---TTTTT-----BS-SB--TT----EE....--TT---EE-CHHHHHHHHHHH- CS
   PF03198.9 206 kadffglnmYeWCgk.ssfetsGyedrvkefenysiPvflseyGCnkvt..............prkftevealyseemtdvfsGGlvYeyseeannYGlvk....ldeddvksllkdfenlkselkki 314
                   d +gln Y+WC +   ++ sGy+  ++++++y iP++lse+GC                   r+f +v +l + +m   fsGG++Ye+s e+n +G+v     ld++d   +l+ +++l+ +++++
  MMETSP1325-20131115|8424_1   4 AIDVYGLNVYNWCSEtEVYQNSGYKGIMDDYSEYGIPMILSEFGCTGGDfatsctsdddpypgGRSFVQVAELTGAHMDGTFSGGIAYEFSMESNGFGMVLkpgfLDGQDDYVTLDSYKALQGQFQTV 131
                 5799*********652779**************************9444445667889999989************************************544448999999999******9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 1391.73
//
Query:       MMETSP1325-20131115|8427_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.30s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 507.46
//
Query:       MMETSP1325-20131115|8428_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|8429_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 528.09
//
Query:       MMETSP1325-20131115|8431_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.7   0.0      0.084   12.6   0.0    1.1  1  PF08863.5 YolD-like protein


Domain annotation for each model (and alignments):
>> PF08863.5  YolD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   6.1e-06     0.084      58      92 .]      18      52 ..       9      52 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.1e-06
   PF08863.5 58 itgtihkidelnkvlkitdafsntikikfedIvdi 92
                + g+++++d+++ ++k++ ++++ +++++++  +i
  MMETSP1325-20131115|8431_1 18 FAGKVESLDPVTGRFKVEYEDGDVEFLPVDQLAAI 52
                679*************************9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 264.09
//
Query:       MMETSP1325-20131115|8432_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1    9.2   5.5          3    7.7   3.8    1.8  1  PF05570.6 Circovirus protein of unknown function (DUF765)


Domain annotation for each model (and alignments):
>> PF05570.6  Circovirus protein of unknown function (DUF765)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.8   0.00022         3       8      27 ..      28      51 ..      22      52 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00022
   PF05570.6  8 SPAPSDILSsvPQ....SeRPPGR 27
                 P PS ILS vP        PPGR
  MMETSP1325-20131115|8432_1 28 TPNPSRILSAVPDrlqiCSLPPGR 51
                599*********622234568887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|8423_1  [L=356]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-31  107.1  15.3    2.7e-07   30.9   0.4    6.4  6  PF08238.7 Sel1 repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.3     6e-07    0.0082       1      39 []      66     101 ..      66     101 .. 0.89
   2 !    7.5   0.0   0.00045       6.1       2      39 .]     103     138 ..     102     138 .. 0.82
   3 !   12.6   0.1   1.1e-05      0.15       3      31 ..     141     166 ..     141     174 .. 0.86
   4 !   30.9   0.4   1.9e-11   2.7e-07       3      38 ..     177     209 ..     175     210 .. 0.90
   5 !   25.3   0.0   1.1e-09   1.5e-05       3      39 .]     213     246 ..     212     246 .. 0.92
   6 !   20.2   0.0   4.4e-08   0.00061       8      39 .]     254     283 ..     248     283 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 6e-07
   PF08238.7   1 aeAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                 a+A  +LG   +y  G+ Gv++d +++  ++++A  +G+
  MMETSP1325-20131115|8423_1  66 ARANAALG--DIYAFGQ-GVERDEDLGAVYWQRAVTHGD 101
                 678999**..777***9.9***************98886 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.00045
   PF08238.7   2 eAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                 e++ nL+  y yl+ ++++  d ++ l++ye+A e+G+
  MMETSP1325-20131115|8423_1 103 ESMTNLA--YHYLRNRDALSVDISQVLHLYERAIELGS 138
                 789****..66677775677799999*********995 PP

  == domain 3    score: 12.6 bits;  conditional E-value: 1.1e-05
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAleWy 31 
                 A++nLG   +y +G+  v+ d+++A+ ++
  MMETSP1325-20131115|8423_1 141 AAFNLG--CLYRDGQ-FVEHDYARAVTLF 166
                 89****..5559***.7********9888 PP

  == domain 4    score: 30.9 bits;  conditional E-value: 1.9e-11
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAleWyekAAeqG 38 
                 + + L+  +my+ Gl Gv +++ kA+e+y++AAe+G
  MMETSP1325-20131115|8423_1 177 SLNGLA--GMYDLGL-GVAQNHTKAYEYYTLAAEAG 209
                 667899..999***9.9*****************99 PP

  == domain 5    score: 25.3 bits;  conditional E-value: 1.1e-09
   PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                 A++n G  ++++nG+ Gvp  +++Al+++ +A + G+
  MMETSP1325-20131115|8423_1 213 AMNNVG--MAFYNGE-GVPESKAEALRYFLLAGDSGN 246
                 9*****..6669**9.9***************99997 PP

  == domain 6    score: 20.2 bits;  conditional E-value: 4.4e-08
   PF08238.7   8 GlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                 Gl++  l+G +Gv++d e+Al  +++AA++Gh
  MMETSP1325-20131115|8423_1 254 GLVL--LDGADGVDQDTERALACFRRAARAGH 283
                 6555..899999*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.53
# Mc/sec: 1609.63
//
Query:       MMETSP1325-20131115|8434_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 167.29
//
Query:       MMETSP1325-20131115|8435_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 330.70
//
Query:       MMETSP1325-20131115|8433_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-09   34.4   0.2    0.00018   20.8   0.1    2.5  2  PF07883.6  Cupin domain
  ------ inclusion threshold ------
      0.021   14.1   0.1       0.55    9.5   0.1    2.3  2  PF00190.17 Cupin


Domain annotation for each model (and alignments):
>> PF07883.6  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.1   2.6e-08   0.00018       6      69 ..      19      87 ..      14      89 .. 0.78
   2 !   11.4   0.0   2.2e-05      0.15       6      69 ..     168     236 ..     163     238 .. 0.81

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 2.6e-08
                ----EE-...EBE-TT-EEEEEEEE--EEEEE-..TEEEEE-TT-EEEE-TT-EBEE.B--SSS-EEEEE CS
   PF07883.6  6 ppGesap...shrHpgedeffyVleGegeltvd..geeveleaGdsvyfpagtpHrf.rNtgdeparllv 69
                p G+s+p   s + ++ d++++V++G +++  d  +e+ + e Gd++ + ag  H+   N gd++++++v
  MMETSP1325-20131115|8433_1 19 PAGTSHPssgSYYLSN-DAVYVVISGNATFGTDtdDEQLVHEYGDAFWVMAGASHGPiTNVGDTDLVVTV 87
                5555555443444445.49**********98554499********************99*****999865 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 2.2e-05
                 ----EE-EBE-TT-EEEEEEEE--EEEEE-....TE..EEEE-TT-EEEE-TT-EBEEB--SSS-EEEEE CS
   PF07883.6   6 ppGesapshrHpgedeffyVleGegeltvd....ge..eveleaGdsvyfpagtpHrfrNtgdeparllv 69 
                 + + s+p h+Hp   +++y+  G++ +  d    +   e+  + Gd+  + +g   + + +g ep++++v
  MMETSP1325-20131115|8433_1 168 AANCSIPYHYHPTG-ALYYIQYGTMYFDGDyassDPmsETGFNMGDVRWVRPGFDYGPEYNGAEPMEITV 236
                 556689********.************9987665225588999999999999988888888888888765 PP

>> PF00190.17  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1     8e-05      0.55      52     125 ..      31      96 ..      26     120 .. 0.80
   2 ?    2.2   0.0     0.014        97      42     103 ..     168     223 ..     158     252 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 8e-05
                 E.SSEEEEEEEE-EEEEEEEES.......EEEEEEEEE----EEEE-TT-EEE.EEEESSSSEEEEEEEESSSCT. CS
  PF00190.17  52 s.napeilyvlqGrgrlgvvvpgcpeqsrrdehqkvrlreGdviviPagvahw.lyndgdnelvavvlfdtnnpqn 125
                     + +++v++G++++g+ ++++     +  h     + Gd++++ ag  h  + n gd++lv  v   +nn++ 
  MMETSP1325-20131115|8433_1  31 YlSNDAVYVVISGNATFGTDTDDE-----QLVH-----EYGDAFWVMAGASHGpITNVGDTDLVVTVTSGANNRAL 96 
                 447788999999999988888854.....3444.....45************658999999999999888888865 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.014
                 -TTEEEEEEEESSEEEEEEEE-EEEEEEEES.......EEEEEEEEE----EEEE-TT-EEE CS
  PF00190.17  42 epgglllPhysnapeilyvlqGrgrlgvvvpgcpeqsrrdehqkvrlreGdviviPagvahw 103
                 + +  ++ hy+ +  ++y+  G+ +    ++g     ++d   ++ ++ Gdv ++ +g+ + 
  MMETSP1325-20131115|8433_1 168 AANCSIPYHYHPTGALYYIQYGTMY----FDGDY--ASSDPMSETGFNMGDVRWVRPGFDYG 223
                 66777899************99999....44443..12222222256666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.40s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1300.88
//
Query:       MMETSP1325-20131115|8437_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 686.96
//
Query:       MMETSP1325-20131115|8440_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   14.6   0.1      0.053   13.4   0.0    1.7  1  PF00249.26 Myb-like DNA-binding domain
        2.3    5.7   5.0        2.8    5.4   3.5    1.1  1  PF04931.8  DNA polymerase phi


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   7.8e-06     0.053      17      45 ..       2      28 ..       1      31 [. 0.90

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 7.8e-06
                HHTTS-.HHHHHHHCTTTS-HHHHHHHHH CS
  PF00249.26 17 kqlGggtWktIartmgkgRtlkqcksrwq 45
                +++G++ ++tI r++  ++t k+++++++
  MMETSP1325-20131115|8440_1  2 ALYGKH-FHTIQRMVK-TKTTKEVVEFYY 28
                689999.********9.**********98 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   3.5   0.00041       2.8     657     694 ..      63     105 ..      59     119 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.00041
   PF04931.8 657 etDddedelkeiedsesesed.....dsEdgeedEkedddeav 694
                  ++ d++ l+e ed+e+e+e+     ++E + + E+e+   av
  MMETSP1325-20131115|8440_1  63 DNEEDLEPLEEAEDAEKEEEEepplsEEEPEPKVEEEEXQGAV 105
                 5889999999999999999997776655666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       682  (0.049883); expected 273.4 (0.02)
Passed bias filter:                      513  (0.0375219); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:01.25
# Mc/sec: 241.55
//
Query:       MMETSP1325-20131115|8442_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   14.1   2.3      0.048   13.7   1.6    1.2  1  PF07974.8 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.6   3.5e-06     0.048      18      32 .]       8      22 ..       2      22 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 3.5e-06
   PF07974.8 18 cgkCvCdsgyqGktC 32
                +g+C+C  g+ G+tC
  MMETSP1325-20131115|8442_1  8 TGTCKCGEGWVGPTC 22
                89************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       527  (0.0385459); expected 273.4 (0.02)
Passed bias filter:                      408  (0.029842); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|8444_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 1098.71
//
Query:       MMETSP1325-20131115|8445_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   12.1  11.4        3.3    7.8   2.5    3.5  3  PF07974.8 EGF-like domain
        1.8    8.5   8.1       0.75    9.8   2.7    2.3  2  PF12955.2 Domain of unknown function (DUF3844)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.5   0.00048       3.3       1      15 [.       9      20 ..       9      22 .. 0.83
   2 ?    6.1   0.2    0.0016        11      19      27 ..      59      67 ..      54      69 .. 0.84
   3 ?    1.1   0.0      0.06   4.1e+02      26      32 .]      80      86 ..      75      86 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00048
   PF07974.8  1 CsadgliCgghGtCv 15
                C+    +C+ghG C 
  MMETSP1325-20131115|8445_1  9 CPG---DCSGHGRCH 20
                884...4*******6 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0016
   PF07974.8 19 gkCvCdsgy 27
                + CvCds++
  MMETSP1325-20131115|8445_1 59 HACVCDSSW 67
                57******9 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.06
   PF07974.8 26 gyqGktC 32
                 y+G++C
  MMETSP1325-20131115|8445_1 80 EYYGPDC 86
                59***** PP

>> PF12955.2  Domain of unknown function (DUF3844)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.7   0.00011      0.75      14      61 ..      12      88 ..       3      94 .. 0.83
   2 ?   -2.2   0.1       0.6   4.1e+03      29      42 ..     103     116 ..      98     133 .. 0.62

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00011
   PF12955.2 14 sCsghGecvkksksk............................kedcyaCkCketvekkksedg.ktvkwgGeaCek 61
                +CsghG+c+k +                               + + +aC C+++      + + +  ++ G++C+ 
  MMETSP1325-20131115|8445_1 12 DCSGHGRCHKMVDLPkmvealplsnlsltairyqdnqdkhtwdSYTGHACVCDSSWAVGLGAGQrQLAEYYGPDCSM 88
                7*********9877678999999999999999999999998886778899999999888765553666999999985 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.6
   PF12955.2  29 kedcyaCkCketve 42 
                 +e+c++ + ket+e
  MMETSP1325-20131115|8445_1 103 EENCFNVSAKETTE 116
                 44666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 748.25
//
Query:       MMETSP1325-20131115|8450_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 404.09
//
Query:       MMETSP1325-20131115|8448_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|8452_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   15.3   0.1      0.018   15.1   0.0    1.1  1  PF07820.7 TraC-like protein


Domain annotation for each model (and alignments):
>> PF07820.7  TraC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   1.3e-06     0.018      19      61 ..      22      67 ..      17      72 .] 0.85

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.3e-06
   PF07820.7 19 kqaetreAeRigRiAlkaGLge...ieieeeelqaafeeiakRFRk 61
                ++  +r Ae i  +A+kaG +e    ++ ++ l++afe+  k   k
  MMETSP1325-20131115|8452_1 22 RKETVRTAEAIRDLAMKAGVSEelrCDVPDSPLKEAFEQYDKQIQK 67
                66789***************9866679***********98777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       442  (0.0323288); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|8453_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|8454_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-07   30.4   0.2      2e-07   30.3   0.1    1.0  1  PF00722.16 Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> PF00722.16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.1   1.5e-11     2e-07      45      91 ..       5      54 ..       2      58 .] 0.83

  Alignments for each domain:
  == domain 1    score: 30.3 bits;  conditional E-value: 1.5e-11
                EEE-EEEEEEE..-------EEEEEEE-TTT.----EEEEEEEE---TTE CS
  PF00722.16 45 ylyGkvearik..aakgaGvvtafwlssede.wdqhdEIDiEflGndtgk 91
                y  G +++ +    + ++G +++f++ se+   ++hdEID+Ef   +++ 
  MMETSP1325-20131115|8454_1  5 YGSGNYSVDMTpfSKITDGYISTFYMYSENLtYTDHDEIDFEFRSGNQDS 54
                7889*******977889*********6655558**********9877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 248.19
//
Query:       MMETSP1325-20131115|8457_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|8441_1  [L=845]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-97  322.6   0.0    4.7e-48  162.6   0.0    3.0  3  PF00004.24 ATPase family associated with various cellular activities (AAA)
    1.9e-22   78.8   0.4    4.8e-22   77.5   0.3    1.8  1  PF02359.13 Cell division protein 48 (CDC48), N-terminal domain
      2e-14   53.1   0.0    9.5e-06   24.7   0.0    3.6  3  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    1.6e-12   47.5   0.3    0.00024   21.1   0.0    4.8  4  PF13401.1  AAA domain
    2.2e-12   46.9   0.0      5e-06   26.3   0.0    3.0  3  PF13671.1  AAA domain
    2.6e-12   46.0   0.0    5.1e-12   45.1   0.0    1.5  1  PF02933.12 Cell division protein 48 (CDC48), domain 2
    4.9e-12   46.5   0.0      1e-05   26.1   0.0    3.0  2  PF13207.1  AAA domain
      2e-11   44.0   0.0    8.4e-06   25.6   0.0    2.8  2  PF07724.9  AAA domain (Cdc48 subfamily)
    2.5e-11   43.3   0.1    8.4e-06   25.4   0.0    3.7  3  PF07728.9  AAA domain (dynein-related subfamily)
    6.1e-11   42.1   0.0    0.00041   20.1   0.0    3.4  3  PF13173.1  AAA domain
    2.3e-10   40.9   0.2     0.0017   18.6   0.0    3.8  3  PF13191.1  AAA ATPase domain
    1.1e-08   34.3   0.0     0.0013   17.7   0.0    2.8  2  PF06414.7  Zeta toxin
    4.9e-08   31.9   0.0    0.00055   18.6   0.0    2.5  2  PF06068.8  TIP49 C-terminus
    4.4e-07   29.7   1.0        1.5    8.3   0.0    4.5  4  PF01637.13 Archaeal ATPase
    8.5e-07   29.0   0.0      0.018   15.0   0.0    3.0  2  PF00910.17 RNA helicase
      9e-07   28.1   0.2      0.047   12.7   0.0    2.7  2  PF01078.16 Magnesium chelatase, subunit ChlI
      1e-06   28.9   0.0      0.012   15.8   0.0    2.8  2  PF13238.1  AAA domain
    1.3e-06   27.9   0.9      0.021   14.4   0.3    2.8  2  PF13245.1  Part of AAA domain
    1.8e-06   27.3   0.3      0.074   12.3   0.0    2.9  2  PF01695.12 IstB-like ATP binding protein
    4.7e-06   25.9   2.5        1.5    8.0   0.0    4.1  4  PF13481.1  AAA domain
    1.1e-05   25.2   0.0     0.0038   16.9   0.0    2.3  2  PF04851.10 Type III restriction enzyme, res subunit
    1.5e-05   24.9   0.1      0.018   14.8   0.0    3.0  3  PF13189.1  Cytidylate kinase-like family
      3e-05   23.9   0.0       0.36   10.6   0.0    2.6  2  PF13521.1  AAA domain
    4.1e-05   23.1   0.0      0.059   12.8   0.0    3.1  3  PF01443.13 Viral (Superfamily 1) RNA helicase
    5.7e-05   22.5   0.0       0.29   10.4   0.0    3.4  2  PF00158.21 Sigma-54 interaction domain
    6.1e-05   22.1   0.6        1.6    7.6   0.0    3.4  3  PF06745.8  KaiC
    7.3e-05   22.3   0.0       0.43   10.0   0.0    2.5  2  PF13479.1  AAA domain
     0.0001   21.1   0.0        0.3    9.7   0.0    2.3  2  PF00931.17 NB-ARC domain
    0.00011   21.7   0.0        1.6    8.1   0.0    3.7  4  PF05729.7  NACHT domain
    0.00015   21.4   0.0       0.34   10.4   0.0    3.0  3  PF00308.13 Bacterial dnaA  protein
     0.0002   20.2   0.0       0.31    9.7   0.0    2.2  2  PF01057.12 Parvovirus non-structural protein NS1
     0.0002   20.5   0.4        1.7    7.6   0.0    3.3  3  PF02562.11 PhoH-like protein
    0.00028   19.8   0.3       0.98    8.2   0.0    3.3  3  PF09848.4  Uncharacterized conserved protein (DUF2075)
    0.00095   18.6   0.0        1.4    8.4   0.0    2.6  2  PF07726.6  ATPase family associated with various cellular activities (AAA)
     0.0013   18.3   0.6        1.2    8.6   0.0    3.8  4  PF03266.10 NTPase
     0.0016   17.9   0.1        1.1    8.6   0.0    3.3  2  PF13604.1  AAA domain
     0.0018   17.1   0.0        0.9    8.2   0.0    3.0  3  PF05673.8  Protein of unknown function (DUF815)
     0.0044   16.7   0.0        3.8    7.2   0.0    2.7  2  PF01202.17 Shikimate kinase
     0.0056   16.4   0.0       0.02   14.6   0.0    1.9  1  PF09336.5  Vps4 C terminal oligomerisation domain
     0.0063   15.5   0.0      0.014   14.4   0.0    1.5  1  PF03152.9  Ubiquitin fusion degradation protein UFD1
  ------ inclusion threshold ------
      0.023   13.8   0.1         13    4.7   0.0    3.4  3  PF12846.2  AAA-like domain
      0.026   14.0   0.1        5.1    6.6   0.0    2.6  2  PF02367.12 Uncharacterised P-loop hydrolase UPF0079
      0.029   13.4   0.1        7.1    5.6   0.0    2.8  2  PF08433.5  Chromatin associated protein KTI12
      0.034   13.5   0.2        4.8    6.4   0.1    3.4  2  PF05707.7  Zonular occludens toxin (Zot)
      0.047   12.3   0.0        1.4    7.4   0.0    2.3  2  PF03215.10 Rad17 cell cycle checkpoint protein
      0.053   13.0   0.0         10    5.5   0.0    2.8  2  PF13086.1  AAA domain
      0.079   12.6   0.0       0.73    9.5   0.0    2.2  2  PF01568.16 Molydopterin dinucleotide binding domain
      0.088   12.2   0.0        5.9    6.3   0.0    2.5  2  PF13555.1  P-loop containing region of AAA domain
       0.11   12.7   0.0        9.4    6.3   0.0    2.5  2  PF13476.1  AAA domain
       0.12   11.6   0.1         22    4.3   0.0    3.5  3  PF00270.24 DEAD/DEAH box helicase
       0.13   11.1   0.1        5.8    5.6   0.0    2.9  3  PF07693.9  KAP family P-loop domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0         5   1.3e+03      54      68 ..      68      83 ..      48      96 .. 0.79
   2 !  162.6   0.0   1.7e-50   4.7e-48       1     131 [.     246     375 ..     246     376 .. 0.98
   3 !  156.2   0.0   1.7e-48   4.4e-46       1     131 [.     519     651 ..     519     652 .. 0.97

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 5
                HHTS.-SEEEEEETGG CS
  PF00004.24 54 keka.kpsilfiDEid 68
                k+ + + +i+++DE+ 
  MMETSP1325-20131115|8441_1 68 KKGKqTVCIVLLDEAQ 83
                3344356*******75 PP

  == domain 2    score: 162.6 bits;  conditional E-value: 1.7e-50
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 vllyGppG GKTl+a+ava+e+g+ f+ i+g+e++sk+ gese+++r+ f+ea+++a psi+fiDEid++a++r++++ e+e+r+v+q+lt +dg+k++ ++v+vigatnrp+++d al+r gRfdr+i i+
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNA-PSIIFIDEIDSIAPKRDKTNGEVERRIVSQMLTLMDGLKSR-ANVVVIGATNRPNSIDAALRRfGRFDREIDIG 375
                 79******************************************************9.****************************************7.66***************************986 PP

  == domain 3    score: 156.2 bits;  conditional E-value: 1.7e-48
                 EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
  PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 vl+yGppG+GKTl+akava+e++++f++++g+ell +++gese+++relf++a++ a p++lf+DE+d++a++r   sg+  + ++rv+nq+lte+dgv  k ++v+vigatnrpd +dpal+r gR+d+ ++i+
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRELFEKARSAA-PCVLFFDELDSIASARggsSGDGGGAADRVINQILTEIDGVGAK-KNVFVIGATNRPDIIDPALMRpGRLDQLVYIP 651
                 79******************************************************9.****************999899999*****************97.55*************************99997 PP

>> PF02359.13  Cell division protein 48 (CDC48), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.3   1.8e-24   4.8e-22       1      83 [.      31     110 ..      31     114 .. 0.95

  Alignments for each domain:
  == domain 1    score: 77.5 bits;  conditional E-value: 1.8e-24
  PF02359.13   1 rLrVaeapddedvgrgivrvspedmeelgleegdvveieg.krk.tvaivwparpedegkgiIrmdgvtRknagvsigdeVtvrk 83 
                 rL+V+ea +d   ++++v +s+++meel+l++gd+v+++g k k tv+iv+ ++ +d  +g I+m++v+Rkn++v++gd Vtv++
  MMETSP1325-20131115|8441_1  31 RLIVDEAASD---DNSVVSLSQKKMEELQLFRGDTVLLKGkKGKqTVCIVLLDEAQD--DGNIKMNKVVRKNLRVRLGDCVTVTS 110
                 79******99...***************************99999*********995..5***********************87 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   3.5e-08   9.5e-06      53     118 ..     246     319 ..     240     374 .. 0.70
   2 !   22.8   0.0   1.3e-07   3.6e-05      52      86 ..     518     552 ..     489     590 .. 0.82
   3 ?    0.4   0.0       0.9   2.4e+02     160     194 ..     665     701 ..     626     717 .. 0.79

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 3.5e-08
   PF05496.7  53 vllyGpPGlGkttlakiiakelgvelkvtsgPvl......ekagdlaalltnleek..dvlfideihrlsrave 118
                 vllyGpPG Gkt +a+ +a+e g+ +    gP +      e +++l   + + e++   ++fidei  ++++ +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGAFFFLINGPEImskmagESESNLRKAFEEAEKNapSIIFIDEIDSIAPKRD 319
                 9*******************************883322222344566556555544337*******99887655 PP

  == domain 2    score: 22.8 bits;  conditional E-value: 1.3e-07
   PF05496.7  52 hvllyGpPGlGkttlakiiakelgvelkvtsgPvl 86 
                  vl+yGpPG Gkt +ak +a+e ++++ +  gP l
  MMETSP1325-20131115|8441_1 518 GVLFYGPPGCGKTLMAKAVANECQANFISVKGPEL 552
                 69******************************987 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.9
   PF05496.7 160 glltsPlrd..rfgivarlefyeveelkeivkrsaki 194
                 +l  sP++d     i a+ + y+ ++l+ei +r+ak+
  MMETSP1325-20131115|8441_1 665 ALRKSPIKDvdLHYIAANTDKYTGADLTEICQRAAKL 701
                 555566665214667888999************9986 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       5.3   1.4e+03     111     111 ..      59      59 ..       8      96 .. 0.55
   2 !   21.1   0.0     9e-07   0.00024       7     125 ..     246     352 ..     240     356 .. 0.72
   3 !   16.4   0.0   2.4e-05    0.0064       7      46 ..     519     550 ..     513     576 .. 0.74
   4 ?   -0.6   0.0       4.4   1.2e+03      77     100 ..     565     594 ..     557     630 .. 0.63

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 5.3
   PF13401.1 111 l 111
                  
  MMETSP1325-20131115|8441_1  59 R 59 
                 1 PP

  == domain 2    score: 21.1 bits;  conditional E-value: 9e-07
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapastspkellqkllsalglpakgrltteellealqealrrrrtrlliiDEaqrL.....s......eealeelrslldd.etgvklvlvGtp 125
                 ++++G++G+GKT+ +r +a+          ++ ++f+ ++ +     +++k++++ ++          l++a++ea +++   ++ iDE++ +     +       + +++  +l+d  ++  ++v++G +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVAN----------ETGAFFFLINGPE----IMSKMAGESES---------NLRKAFEEAEKNAPS-IIFIDEIDSIapkrdKtngeveRRIVSQMLTLMDGlKSRANVVVIGAT 352
                 79******************..........5566666666666....44555555554.........455688888888888.999999999877655145556666677777777778888888888876 PP

  == domain 3    score: 16.4 bits;  conditional E-value: 2.4e-05
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveap 46 
                 ++++G++G+GKT+ ++ +a++         +a++++v  p
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANEC--------QANFISVKGP 550
                 789*****************98........4444444443 PP

  == domain 4    score: -0.6 bits;  conditional E-value: 4.4
   PF13401.1  77 ealqealrrrrtrlliiDEaqrL......s 100
                 + l e++r+++ ++l  DE++ +      s
  MMETSP1325-20131115|8441_1 565 RELFEKARSAAPCVLFFDELDSIasarggS 594
                 5566677777779*******9976554441 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   1.9e-08     5e-06       2      82 ..     246     356 ..     246     411 .. 0.69
   2 !   16.9   0.0   1.5e-05    0.0041       2      44 ..     519     563 ..     519     630 .. 0.82
   3 ?   -1.2   0.0       5.8   1.5e+03      25      78 ..     704     757 ..     692     773 .. 0.71

  Alignments for each domain:
  == domain 1    score: 26.3 bits;  conditional E-value: 1.9e-08
   PF13671.1   2 vllvGlpGsGKstlaerllkklg..yvrlsqdtlrkrlfgtdqqskt............................dytrvlkrlyqilnklarkalsagrs.vivdatnlsr 82 
                 vll G+pGsGK+  a+++++++g  +++++ ++++++++g+   +++                               +v+ r+  +++ l  + l+++++ v++ atn+ +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGafFFLINGPEIMSKMAGESESNLRkafeeaeknapsiifideidsiapkrdkTNGEVERRIVSQMLTLM-DGLKSRANvVVIGATNRPN 356
                 7899*******************99999***********96555555667777888888999999988888885445557777777775666.5555555515556666543 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 1.5e-05
   PF13671.1   2 vllvGlpGsGKstlaerllkklg..yvrlsqdtlrkrlfgtdqqs 44 
                 vl+ G+pG+GK+  a++++++++  ++ +  ++l + +fg+   +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQanFISVKGPELLTMWFGESEAN 563
                 799********************7777788889999998854443 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 5.8
   PF13671.1  25 yvrlsqdtlrkrlfgtdqqsktdytrvlkrlyqilnklarkalsagrsvivdat 78 
                  + +s d +r rl++++++++    +  + + +i  k  ++a +a r  +  a 
  MMETSP1325-20131115|8441_1 704 RESISRDMERARLAAENPDDEMADVEEDDPVPYIGPKHFEEAVRASRRSVSEAS 757
                 566899999999999888887777777777888888888888887776665555 PP

>> PF02933.12  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.0   1.9e-14   5.1e-12       3      62 ..     133     195 ..     131     197 .. 0.95

  Alignments for each domain:
  == domain 1    score: 45.1 bits;  conditional E-value: 1.9e-14
                 -THHHH.HHHHHH--..-EE----EE-EE----EEEEEEEEEESS.SEE--TTSEEEE----X CS
  PF02933.12   3 dgdema.ylkrqFlg..rpvskGdiivfeflgkeiklvVvstePsgpvkitedTeielgekpv 62 
                  g++++ ylk +Fl   rpv+kGd++ ++  +++++++Vv+t+Ps  +++ +dT i+++ +p 
  MMETSP1325-20131115|8441_1 133 TGNLFDvYLKPYFLEayRPVQKGDLFLVRQAMHPVEFKVVETDPSPFCIVAPDTVIHCEGEPI 195
                 68999******************************************************9986 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   3.9e-08     1e-05       2     106 ..     246     387 ..     246     410 .. 0.61
   2 !   17.0   0.0   2.6e-05     0.007       2      46 ..     519     564 ..     519     668 .. 0.79

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 3.9e-08
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG..B-......-GGGS-.B-----B--.SSGGGB-HHHHHHHH...............H..HHHHHH...............TTS---..--.------EEEEE----TT...GGTT CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd..ll......reeglk.elddgeres.kdadadllaaildglaa...........kkdtlswvidg...............alesel..dl.rleeadeiiyldaplpe...crkr 106
                 ++++GppGsGK+ +a+++a++ g   + ++   ++       e +l+  +++ e ++  ++ +d++++i+ + ++           +      ++dg                  + +  +l r+ + d+ i++  p+++   + +r
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGAFFFLINGpeIMskmageSESNLRkAFEEAEKNApSIIFIDEIDSIAPKRDKtngeverrivsQML---TLMDGlksranvvvigatnrP--NSIdaALrRFGRFDREIDIGVPDENgrlEIFR 387
                 789********************888888887677888888444444333322222236777888887766665555555556544222...444445555555555455431..22223444666777777777777652234444 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 2.6e-05
                 E--B--TT---HHHHHHHHHHSTEEEEEGGG.B--GGGS-.B----- CS
   PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd.llreeglk.elddge 46 
                 ++++GppG+GK+  ak++a++   + +s +    +   +  e ++++
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANFISVKGpE-LLTMWFgESEANV 564
                 689*****************9988888887742.3444443333444 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   3.1e-08   8.4e-06       6     105 ..     246     339 ..     241     346 .. 0.85
   2 !   15.2   0.0   4.9e-05     0.013       6     100 ..     519     610 ..     514     621 .. 0.70

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 3.1e-08
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--..-EEEETGGG----.------------HHHHHHHH-- CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpk.essgadvSregVqrdLLqileg 105
                 +ll gp g+Gkt++a+a+a+   +     +  ++  e++     +   +++   +++  +ae++   i+++DEid i+pk ++ + +v r  ++  +L +++g
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGA----FFFLINGPEIMS----KMAGESESNLRKAFEEAEKNApsIIFIDEIDSIAPKrDKTNGEVERR-IVSQMLTLMDG 339
                 6899****************9996....99**********....88888888888888888888889*************77777777776.55567778876 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 4.9e-05
                 EEEE-------HHHHHHHHHHTT-....--EEEEGGG---..----THHHHHHHHHTTT-HHHHT---EEEETGGG----...------------HHHHH CS
   PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk...essgadvSregVqrdLL 100
                 +l+ gp g+Gkt++aka+a+  ++    ++i +   ell+    e+e  v +l  ++      +   ++++DE+d i++    +s       + V + +L
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQA----NFISVKGPELLTmwFGESEANVRELFEKAR----SAAPCVLFFDELDSIASArggSSGDGGGAADRVINQIL 610
                 799*******************96....999999999999454455555555555443....33455***********9775323333334445555555 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   3.1e-08   8.4e-06       1     137 [.     245     364 ..     245     365 .. 0.79
   2 !   13.3   0.0   0.00017     0.046       1      34 [.     518     551 ..     518     591 .. 0.77
   3 ?   -2.0   0.0         9   2.4e+03     111     135 ..     618     638 ..     603     640 .. 0.76

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 3.1e-08
                 EEEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------.....G-SEEEEESGGG---HHHHHHHHHHHSSEEE..----EEE---.......-EEEEE-SS--.-TT-TTHHHHT CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraar.....egeilvlDEveraesevlnsLlslleerrlllpeggelvkaknddlleknfrviatanpldrslnelspalrs 137
                 +vlL GppG+gK+ +a+ +a  +++ ++ +++++ +++     + ++             +a++      ++i+++DE++ + ++  ++ +   e+r ++  ++ +l++  +    + n+ vi+++n+++    ++++alr+
  MMETSP1325-20131115|8441_1 245 GVLLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKMAGESESNL------------RKAFEeaeknAPSIIFIDEIDSIAPKR-DKTNGEVERRIVS--QMLTLMDGLKS---RANVVVIGATNRPN----SIDAALRR 364
                 59********************************9987554444444............333333336789*********999874.6777888888887..77777766653...468********999....99999986 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 0.00017
                 EEEEE------HHHHHHHGGGGBS--EEEEE--T CS
   PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltr 34 
                 +vl  GppG+gK+ +a+ +a   ++++  v +++
  MMETSP1325-20131115|8441_1 518 GVLFYGPPGCGKTLMAKAVANECQANFISVKGPE 551
                 5899****************99988888777765 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 9
                 ....-EEEEE-SS--.-TT-TTHHH CS
   PF07728.9 111 leknfrviatanpldrslnelspal 135
                 ++kn+ vi+++n++d     ++pal
  MMETSP1325-20131115|8441_1 618 AKKNVFVIGATNRPD----IIDPAL 638
                 466899*******99....666665 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.72   1.9e+02      35      75 ..      45      87 ..      25     110 .. 0.64
   2 !   20.1   0.0   1.5e-06   0.00041       5      77 ..     246     330 ..     243     372 .. 0.69
   3 !   15.8   0.0   3.2e-05    0.0085       5      74 ..     519     588 ..     515     652 .. 0.69

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.72
   PF13173.1 35 inlddeelrkladpellelfleklkekkky..lflDEiqevpe 75
                ++l +++ ++l+ ++ ++++l+ +k+k+++  ++lDE+q   +
  MMETSP1325-20131115|8441_1 45 VSLSQKKMEELQLFRGDTVLLKGKKGKQTVciVLLDEAQDDGN 87
                444444444444443345666654444444469******8654 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 1.5e-06
   PF13173.1   5 lvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe..llelfleklkekkkylflDEiqev............pewe 77 
                 ++++Gp ++GKt +++ +a+e      ++ in  +   + + ++e  l ++f e +k+  +++f+DEi  +            +++ 
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETG--AFFFLINGPEIMSKMAGESEsnLRKAFEEAEKNAPSIIFIDEIDSIapkrdktngeveRRIV 330
                 789****************9988..777777777765544334445466888887777899*******9995555555555553344 PP

  == domain 3    score: 15.8 bits;  conditional E-value: 3.2e-05
   PF13173.1   5 lvitGpRrvGKttllkqlakellkeesilyinlddeelrkla..dpe.llelflek.lkekkkylflDEiqevp 74 
                 ++ +Gp ++GKt ++k +a+e        +i+++ +el+++   ++e + ++++ek  +    +lf+DE   + 
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQ----ANFISVKGPELLTMWfgESEaNVRELFEKaRSAAPCVLFFDELDSIA 588
                 7889***********99996655....5555555555544331133344455555524557788*****99883 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   6.2e-06    0.0017      20      44 ..     241     264 ..     214     271 .. 0.80
   2 ?   -1.1   0.0       7.2   1.9e+03     112     141 ..     286     312 ..     264     349 .. 0.77
   3 !   17.0   0.0   1.9e-05    0.0052      24      57 ..     515     545 ..     508     614 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 6.2e-06
   PF13191.1  20 segsplllvtGpsGiGKSsLlrela 44 
                  +++  +l++Gp+G+GK+ ++r++a
  MMETSP1325-20131115|8441_1 241 KPPR-GVLLYGPPGSGKTLIARAVA 264
                 4444.9*****************54 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 7.2
   PF13191.1 112 iglqalvalldaalartrrpklvlvlDDlq 141
                 +++++l ++ ++a+++++    ++++D+++
  MMETSP1325-20131115|8441_1 286 ESESNLRKAFEEAEKNAP---SIIFIDEID 312
                 667788888888888888...899999854 PP

  == domain 3    score: 17.0 bits;  conditional E-value: 1.9e-05
   PF13191.1  24 p..lllvtGpsGiGKSsLlrelakpillerlrfaag 57 
                 p   +l++Gp+G+GK+ ++++     ++++++    
  MMETSP1325-20131115|8441_1 515 PskGVLFYGPPGCGKTLMAKA-----VANECQANFI 545
                 2348*****************.....6665555444 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   4.8e-06    0.0013      15     121 ..     242     370 ..     233     397 .. 0.77
   2 !   13.2   0.0   0.00012     0.031      19      55 ..     519     554 ..     513     575 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 4.8e-06
   PF06414.7  15 kpkavllgGqpGAGKtslaellleelaagnivridaDelrkyh.........................payrelekkdpkeaseltqkdaselveklidralekgyniilegtlrspdkarkiarklkkagy 121
                  p+ vll G+pG+GKt +a+++ +e+ +  +  i++ e++++                           +++++  k++k++ e+ ++ +s++    +   l+ + n+++ g+   p+ ++   r++ + ++
  MMETSP1325-20131115|8441_1 242 PPRGVLLYGPPGSGKTLIARAVANET-GAFFFLINGPEIMSKMagesesnlrkafeeaeknapsiifiDEIDSIAPKRDKTNGEVERRIVSQMLT--LMDGLKSRANVVVIGATNRPNSIDAALRRFGRFDR 370
                 6999*********************9.9999*********9998888888887777777777777777777776667777777777776666653..44566777777777777777776666666665555 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 0.00012
   PF06414.7  19 vllgGqpGAGKtslaellleelaagnivridaDelrk 55 
                 vl  G+pG+GKt +a+++ +e  + n++ +++ el +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANEC-QANFISVKGPELLT 554
                 7778******************.*******9998855 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0     2e-06   0.00055      51     107 ..     244     295 ..     237     345 .. 0.78
   2 !   10.6   0.0   0.00055      0.15      50      98 ..     516     562 ..     509     573 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 2e-06
   PF06068.8  51 ravLlaGppgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqalRksi 107
                 r+vLl Gppg+Gkt +a a+++e g    f  ++g e+ s     +e    +lRk+ 
  MMETSP1325-20131115|8441_1 244 RGVLLYGPPGSGKTLIARAVANETG--AFFFLINGPEIMSKMAGESES---NLRKAF 295
                 89*********************99..78999*******998887774...555555 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00055
   PF06068.8  50 GravLlaGppgtGktalaiaiskelgedvpfvalsgsevyslevkktev 98 
                  ++vL+ Gppg Gkt +a a+++e      f++++g e+ ++    +e+
  MMETSP1325-20131115|8441_1 516 SKGVLFYGPPGCGKTLMAKAVANECQ--ANFISVKGPELLTMWFGESEA 562
                 589*********************87..679999999988776666665 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1      0.33        89     115     136 ..      68      92 ..       8     100 .. 0.70
   2 !    7.9   0.0    0.0074         2      21      44 ..     244     267 ..     234     287 .. 0.83
   3 ?    6.3   0.0     0.022         6      91     202 ..     276     388 ..     263     414 .. 0.70
   4 !    8.3   0.0    0.0057       1.5      23      45 ..     519     541 ..     509     626 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.33
                 H----..EEEEEETGGGGG.----- CS
  PF01637.13 115 kkgkk..iiiiiDElqkli.lglng 136
                 kkgk+  +i+++DE+q  + +++n+
  MMETSP1325-20131115|8441_1  68 KKGKQtvCIVLLDEAQDDGnIKMNK 92 
                 4555578*********998777663 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0074
                 SEEEEE--TT---HHHHHHHHHH- CS
  PF01637.13  21 siiviyGprrsGKTaLlkeileel 44 
                 + +++yGp +sGKT + + +++e+
  MMETSP1325-20131115|8441_1 244 RGVLLYGPPGSGKTLIARAVANET 267
                 5689**********9999999987 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.022
                 .-----TS-GG.G--HHHHHHHHHH----EEEEEETGGGGG----.....---HHHHHHHHHHHH...-TTEEEEE-------HHHTT-TTSTT------.EE-----HHHHHHHHH- CS
  PF01637.13  91 leeilkkksklvflaleellealkkkgkkiiiiiDElqklilgln.....gakslvkeLlnlidsltkekhlcvvlclSseglfielvyskaplegRhky.ilvkdfdketalnflre 202
                 + ei++k     +++l++++e+ +k +   ii iDE+  +  + +      ++++v+++l l+d  +k+   +vv+ ++    +i+       ++gR +  i++   d++  l+++r 
  MMETSP1325-20131115|8441_1 276 GPEIMSKMAGESESNLRKAFEEAEKNAP-SIIFIDEIDSIAPKRDktngeVERRIVSQMLTLMDG-LKSRANVVVIGATNRPNSID---AALRRFGRFDReIDIGVPDENGRLEIFRI 388
                 5566666666678888888888888775.899*******993333677777899***********.77777888888888777777...55566677666666666655555555555 PP

  == domain 4    score: 8.3 bits;  conditional E-value: 0.0057
                 EEEE--TT---HHHHHHHHHH-. CS
  PF01637.13  23 iviyGprrsGKTaLlkeileelk 45 
                 ++ yGp ++GKT + k +++e +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQ 541
                 688*********99999999874 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0    0.0018      0.47       1      26 [.     246     271 ..     246     295 .. 0.78
   2 !   15.0   0.0   6.8e-05     0.018       1      26 [.     519     544 ..     519     570 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0018
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkkl 26 
                 ++lyGp+g GK+++a+ +a++    +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGAFF 271
                 689**************998876655 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 6.8e-05
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkkl 26 
                 +++yGp+g+GK+++ak +a++ + ++
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANF 544
                 689**************999987655 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   0.00023     0.061      25      42 ..     246     263 ..     242     267 .. 0.90
   2 !   12.7   0.0   0.00017     0.047      24      42 ..     518     536 ..     511     541 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00023
  PF01078.16  25 lllvGppGsGKtmlakrl 42 
                 +ll+GppGsGKt++a+++
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAV 263
                 79*************987 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 0.00017
  PF01078.16  24 nlllvGppGsGKtmlakrl 42 
                  +l++GppG+GKt++ak++
  MMETSP1325-20131115|8441_1 518 GVLFYGPPGCGKTLMAKAV 536
                 589*************987 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.4e-05     0.012       1      23 [.     246     295 ..     246     356 .. 0.64
   2 !   10.1   0.0    0.0025      0.66       1      23 [.     519     546 ..     519     575 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4.4e-05
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl...........................g 23 
                 +l+ G+pG+GKt +a++ a+++                            
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETgaffflingpeimskmagesesnlrkaF 295
                 6899***************9976666666664444444444433333332 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.0025
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl.....g 23 
                 +l+ G+pG+GKt  ak+ a+++     +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECqanfiS 546
                 6789**************9997443330 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.3   7.9e-05     0.021      10      32 ..     244     264 ..     236     269 .. 0.78
   2 !   10.6   0.0    0.0012      0.32      16      34 ..     522     540 ..     512     553 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 7.9e-05
   PF13245.1  10 npllvvtGgPGtGKTttlaaiia 32 
                 ++ +++ G+PG+GKT ++a+++a
  MMETSP1325-20131115|8441_1 244 RG-VLLYGPPGSGKT-LIARAVA 264
                 44.455*********.8888887 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0012
   PF13245.1  16 tGgPGtGKTttlaaiiaal 34 
                  G+PG GKT  + a+++++
  MMETSP1325-20131115|8441_1 522 YGPPGCGKTLMAKAVANEC 540
                 6********6666666655 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0    0.0004      0.11      49      70 ..     245     266 ..     239     323 .. 0.80
   2 !   12.3   0.0   0.00028     0.074      48      71 ..     517     540 ..     512     549 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.0004
  PF01695.12  49 nlvllGpsGvGKthlAialgve 70 
                  ++l Gp+G GKt +A a++ e
  MMETSP1325-20131115|8441_1 245 GVLLYGPPGSGKTLIARAVANE 266
                 799**************99865 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.00028
  PF01695.12  48 enlvllGpsGvGKthlAialgvea 71 
                 + +++ Gp+G GKt +A a++ e 
  MMETSP1325-20131115|8441_1 517 KGVLFYGPPGCGKTLMAKAVANEC 540
                 7899***************99875 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1     0.014       3.8      36      52 ..     246     262 ..     233     271 .. 0.84
   2 ?    7.0   0.0     0.012       3.1     129     186 ..     290     349 ..     269     357 .. 0.73
   3 !    8.0   0.0    0.0055       1.5      30      54 ..     514     537 ..     489     543 .. 0.80
   4 ?   -0.1   0.0       1.7   4.5e+02     128     171 ..     562     608 ..     543     625 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.014
   PF13481.1  36 tllaGapgtGKStlalq 52 
                 +ll+G+pg+GK+ +a +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARA 262
                 79**********99855 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.012
   PF13481.1 129 dlerllaaieelegpdlvviDtlsrlvggdensnsdv.gaviaalerlakrtg..aavllv 186
                  l++  +++e+ + p+++ iD ++++++  ++ n +v +++++++  l + ++  a v+++
  MMETSP1325-20131115|8441_1 290 NLRKAFEEAEK-NAPSIIFIDEIDSIAPKRDKTNGEVeRRIVSQMLTLMDGLKsrANVVVI 349
                 34455556666.55***************99999998899999887776644332555555 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.0055
   PF13481.1  30 lprgsltllaGapgtGKStlalqla 54 
                  p ++ +l++G+pg+GK+ +a + a
  MMETSP1325-20131115|8441_1 514 SPSKG-VLFYGPPGCGKTLMAKAVA 537
                 44443.89***********998766 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 1.7
   PF13481.1 128 adlerllaaieelegpdlvviDtlsrlvgg..densnsd...v.gaviaa 171
                 a +++l + +++   p ++ +D l++++++  +  s+ d   + ++vi++
  MMETSP1325-20131115|8441_1 562 ANVRELFEKARS-AAPCVLFFDELDSIASArgG--SSGDgggAaDRVINQ 608
                 456778888888.56999999999998887542..332212323666665 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.4e-05    0.0038      24      99 ..     242     313 ..     214     349 .. 0.66
   2 ?    5.8   0.0     0.037        10      25      54 ..     516     545 ..     489     571 .. 0.83

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.4e-05
  PF04851.10  24 ekkrglivmaTGtGKTlvaasliarlarkflflvprkelleqaleefkkfeskkiefekkniavakkdklfgeeqk 99 
                   + +l+  + G+GKTl+a + +a+    f+fl+++ e+++++  e +    k +e+++kn +       ++e+ +
  MMETSP1325-20131115|8441_1 242 PPRGVLLYGPPGSGKTLIARA-VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAP---SIIFIDEIDS 313
                 5667889999**********6.999999****************9994444444444444443...2222222333 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.037
  PF04851.10  25 kkrglivmaTGtGKTlvaasliarlarkfl 54 
                  k +l+  + G+GKTl+a +++ ++  +f+
  MMETSP1325-20131115|8441_1 516 SKGVLFYGPPGCGKTLMAKAVANECQANFI 545
                 67889999**********998888877887 PP

>> PF13189.1  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       4.7   1.3e+03      73     116 ..      63     123 ..      16     125 .. 0.59
   2 !   14.8   0.0   6.8e-05     0.018       8     102 ..     252     350 ..     246     353 .. 0.72
   3 ?    6.1   0.0     0.031       8.2       8      56 ..     525     573 ..     521     624 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 4.7
   PF13189.1  73 k................dlslddklfkaqsevirel.aekescVivGrcadyilrdrpnvl 116
                 +                d+++dd   k+++ v ++l ++ ++cV v  ++d+ + +r +vl
  MMETSP1325-20131115|8441_1  63 VllkgkkgkqtvcivllDEAQDDGNIKMNKVVRKNLrVRLGDCVTVTSHGDVPYGKRVHVL 123
                 0222223344466677778888888888776666665567799999999998887777665 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 6.8e-05
   PF13189.1   8 yGSgGreigekLaeklgipy..ydk.eileeaakesgiseeev.ekydekassesllksavkgsvagsfkdlslddklfkaqsevirelaekescVivG 102
                  GSg++ i++++a++ g  +  ++  ei+ ++a es+ +  ++ e+++++a+s  ++ ++++ + +   ++ + ++++++ +  ++  l  + ++V++G
  MMETSP1325-20131115|8441_1 252 PGSGKTLIARAVANETGAFFflINGpEIMSKMAGESESNLRKAfEEAEKNAPSIIFIDEIDSIAPKRDKTNGEVERRIVSQMLTLMDGLKSRANVVVIG 350
                 7****************9993334457777777776666554436666666644445555555555555588889999988888999998899999998 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.031
   PF13189.1   8 yGSgGreigekLaeklgipyydkeileeaakesgiseeevekydekass 56 
                  G+g++  ++++a++ + ++++ +  e +   +g se+ v++  eka s
  MMETSP1325-20131115|8441_1 525 PGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRELFEKARS 573
                 6**********************99999999999999999988888875 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0    0.0014      0.36       2      42 ..     246     291 ..     245     311 .. 0.69
   2 !   10.6   0.0    0.0014      0.37       2      36 ..     519     558 ..     518     582 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.0014
   PF13521.1   2 ivitGgpstGKTtlleaLaar.gypvv....pEvarevleeklakg 42 
                 + + G+p++GKT +++a+a++ g   +    pE++ ++  e   + 
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANEtGAFFFlingPEIMSKMAGESESNL 291
                 6799***************765544332256666666655554444 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0014
   PF13521.1   2 ivitGgpstGKTtlleaLaar...gypvv..pEvarevle 36 
                 + + G+p++GKT  ++a+a++   ++  v  pE  ++++ 
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANEcqaNFISVkgPELLTMWFG 558
                 6799***************766554444447776666655 PP

>> PF01443.13  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       1.3   3.4e+02      42      77 ..      13      47 ..       3      63 .. 0.65
   2 ?    5.6   0.0     0.034         9       5      67 ..     250     311 ..     246     316 .. 0.69
   3 !   12.8   0.0   0.00022     0.059       5      66 ..     523     583 ..     519     588 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 1.3
  PF01443.13 42 lsvrtvdsflmalvkskgkililDEylllhaGyill 77
                ++ + + ++ m +++s  ++li+DE+ + +  ++ l
  MMETSP1325-20131115|8441_1 13 DKPKDLSTAIMDKKRS-PNRLIVDEAASDDNSVVSL 47
                4555566777777665.89*******9988776666 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.034
  PF01443.13   5 GvpGcGKStlirkllrt.....ltvnrptaelrtegkpklpnlsvrtvdsflmalvkskgkililDEy 67 
                 G pG+GK+ + r ++++     +  n p  e+ ++ + +++++  + ++++++++      i+++DE+
  MMETSP1325-20131115|8441_1 250 GPPGSGKTLIARAVANEtgaffFLINGP--EIMSKMAGESESNLRKAFEEAEKNA----PSIIFIDEI 311
                 88**************988875333333..5555555555555555566666655....469999997 PP

  == domain 3    score: 12.8 bits;  conditional E-value: 0.00022
  PF01443.13   5 GvpGcGKStlirkllrt....ltvnrptaelrtegkpklpnlsvrtvdsflmalvkskgkililDE 66 
                 G pGcGK+ + + ++++    + +++   el+t+++ +++++  + ++++ +a+ +    +l++DE
  MMETSP1325-20131115|8441_1 523 GPPGCGKTLMAKAVANEcqanFISVKG-PELLTMWFGESEANVRELFEKARSAAPC----VLFFDE 583
                 78******************9555555.7*******99999988888888888776....799999 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0    0.0011      0.29      23     108 ..     244     317 ..     233     369 .. 0.61
   2 !    7.4   0.0    0.0091       2.4      23      51 ..     517     542 ..     503     588 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0011
                 S-EEEE-------HHHHHHHHHTSTTTTS--EEEETTTS-HHHH.HHHH------------S-----TTTG----EEEET-----HH CS
  PF00158.21  23 ltvlitGesGtGKellAraiheaskrkkkpfvavncaaipeeLl.eseLFGhekGaFtGAekekkGlfekadgGtLfLDeigelple 108
                   vl+ G  G+GK+l+Ara+ +++    + f  +n  +i +++  ese     + aF  Ae        k   +++f+Dei ++ ++
  MMETSP1325-20131115|8441_1 244 RGVLLYGPPGSGKTLIARAVANET---GAFFFLINGPEIMSKMAgESE--SNLRKAFEEAE--------KNAPSIIFIDEIDSIAPK 317
                 569****************97654...467777777666544431222..23334444443........344567777777777665 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0091
                 S-EEEE-------HHHHHHHHHTSTTTTS CS
  PF00158.21  23 ltvlitGesGtGKellAraiheaskrkkk 51 
                   vl  G  G+GK+l+A+a+ ++ +   +
  MMETSP1325-20131115|8441_1 517 KGVLFYGPPGCGKTLMAKAVANECQ---A 542
                 569****************988765...3 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.017       4.6      18      37 ..     242     261 ..     233     267 .. 0.83
   2 ?    4.5   0.0     0.052        14     105     151 ..     289     342 ..     266     361 .. 0.71
   3 !    7.6   0.0    0.0061       1.6      15      37 ..     512     534 ..     503     549 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.017
   PF06745.8  18 egrvvlitGepGtGKtifal 37 
                   r vl++G pG+GKt++a 
  MMETSP1325-20131115|8441_1 242 PPRGVLLYGPPGSGKTLIAR 261
                 56779************985 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.052
   PF06745.8 105 eklaeaikeika...krvviDsitgl....yeekeavaReilrqlvrvlkklgv 151
                 ++l++a +e +    + + iD i+++     +++ +v R+i+ q+++ + +l+ 
  MMETSP1325-20131115|8441_1 289 SNLRKAFEEAEKnapSIIFIDEIDSIapkrDKTNGEVERRIVSQMLTLMDGLKS 342
                 45555555444333477888888888775666667789*********9988765 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0061
   PF06745.8  15 GipegrvvlitGepGtGKtifal 37 
                 G+   + vl +G pG+GKt++a+
  MMETSP1325-20131115|8441_1 512 GMSPSKGVLFYGPPGCGKTLMAK 534
                 6666778999***********97 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0016      0.43       6      23 ..     246     263 ..     243     315 .. 0.78
   2 !    9.6   0.0     0.002      0.55       6      23 ..     519     536 ..     516     567 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0016
   PF13479.1   6 vliYGkpGiGKTslaktl 23 
                 vl+YG+pG+GKT  a+ +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAV 263
                 79**********998876 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.002
   PF13479.1   6 vliYGkpGiGKTslaktl 23 
                 vl YG+pG GKT +ak +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAV 536
                 789***********9976 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0021      0.55      22      42 ..     246     266 ..     234     271 .. 0.89
   2 !    9.7   0.0    0.0011       0.3      22      43 ..     519     540 ..     509     556 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0021
                 EEEE-------HHHHHHHTS- CS
  PF00931.17  22 vglvGmgGvGKttlakqvykd 42 
                 v l+G +G+GKt +a++v ++
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANE 266
                 789***************997 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.0011
                 EEEE-------HHHHHHHTS-S CS
  PF00931.17  22 vglvGmgGvGKttlakqvykde 43 
                 v ++G +G+GKt +ak+v ++ 
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANEC 540
                 779***************9983 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0     0.006       1.6       3      23 ..     246     266 ..     244     269 .. 0.89
   2 ?   -1.6   0.0         6   1.6e+03      67     111 ..     289     334 ..     279     367 .. 0.58
   3 !    7.8   0.0    0.0075         2       3      25 ..     519     541 ..     517     548 .. 0.88
   4 ?    0.2   0.0       1.6   4.4e+02      57      98 ..     552     592 ..     546     613 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.006
   PF05729.7   3 vilqGeaGsGKTtLlqklasa 23 
                 v+l G++GsGKT  ++ +a++
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANE 266
                 899************999876 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 6
   PF05729.7  67 apvsevwivllelperlLlilDglDelvsdlgq..lkekqpvrtlLs 111
                 ++ ++++ +  ++++++ +++D +D ++ + ++   + ++++   + 
  MMETSP1325-20131115|8441_1 289 SNLRKAFEEAEKNAPSI-IFIDEIDSIAPKRDKtnGEVERRIVSQML 334
                 55555555555555555.55799999988777644222333333344 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0075
   PF05729.7   3 vilqGeaGsGKTtLlqklasawa 25 
                 v+  G++G+GKT +++ +a++ +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQ 541
                 6789*************999865 PP

  == domain 4    score: 0.2 bits;  conditional E-value: 1.6
   PF05729.7  57 lLfsqlpepaapvsevwivllelperlL...lilDglDelvsdlg 98 
                 lL+  + e++a+v+e    l e ++++    l++D lD ++s  g
  MMETSP1325-20131115|8441_1 552 LLTMWFGESEANVRE----LFEKARSAApcvLFFDELDSIASARG 592
                 555566778888888....4444444444449*******998766 PP

>> PF00308.13  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0    0.0013      0.34      37     186 ..     246     399 ..     241     419 .. 0.74
   2 ?    6.8   0.0     0.015       4.1      37      64 ..     519     546 ..     511     557 .. 0.90
   3 ?   -0.9   0.0       3.5   9.5e+02     162     197 ..     649     682 ..     645     701 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0013
                 EEEE-------HHHHHH---HHHHHSSSS-EEEEEHHHHHHHHHHHHH---HHHHHHHHTT-.SEEEEE-GGGG---.---H........HHHHHHHHHHHT---EEEEE-SS-TTT-SS--HHHHHHHH---EEE-----HHHHHHHHHHHHHHH---..- CS
  PF00308.13  37 lfiygevGlGKtHLLqaignevlenapnarvvYltaeeFlkelvdalrdkkiekfkkeyrkv.DllliDDiqflakk.ektq........eelfhifnalleenkqivlssDraPkeleeledrlrsrfeaGlvveiekpdletrlailekkleeenle..i 186
                 +++yg  G GKt + +a++ne+ +         +++ e ++++    +++  ++f +  +++  ++ iD+i  +a k +kt+         +++++++ l  +++ +v+ +   P+++     r+  rf+    ++i  pd + rl+i + + ++ +l+  +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGAF-----FFLINGPEIMSKMAGESESNLRKAFEEAEKNApSIIFIDEIDSIAPKrDKTNgeverrivSQMLTLMDGLKSRANVVVIGATNRPNSIDAALRRF-GRFDR--EIDIGVPDENGRLEIFRIHTRNMKLDedV 399
                 799***********99999987655.....57899********************998886627889******99762455411111111456777778888899999*******9887665554.67877..57778899999999997655544443333 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.015
                 EEEE-------HHHHHH---HHHHHSSS CS
  PF00308.13  37 lfiygevGlGKtHLLqaignevlenapn 64 
                 +++yg  G GKt + +a++ne ++n+ +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANFIS 546
                 799******************9998765 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 3.5
                 E-----HHHHHHHHHHHHHHH-----TTHHHHHHHH CS
  PF00308.13 162 eiekpdletrlailekkleeenleipeevlefiaqr 197
                  i  pdle+rl+il+  l+++ ++  +  l++ia +
  MMETSP1325-20131115|8441_1 649 YIPMPDLESRLSILKAALRKSPIK--DVDLHYIAAN 682
                 57789*********9988766544..4445555555 PP

>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0037      0.98     117     140 ..     246     269 ..     237     275 .. 0.87
   2 !    9.7   0.0    0.0011      0.31     117     138 ..     519     540 ..     513     545 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0037
  PF01057.12 117 vwfyGpantGktnlaeaIakavpl 140
                 v++yGp+  Gkt +a+a a+ +  
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGA 269
                 899***************997665 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.0011
  PF01057.12 117 vwfyGpantGktnlaeaIakav 138
                 v+fyGp+ +Gkt +a+a a+ +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANEC 540
                 89****************9865 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.34        90     121     140 ..      75      94 ..      49     119 .. 0.71
   2 ?    6.7   0.0     0.013       3.5      22      40 ..     246     264 ..     240     269 .. 0.88
   3 !    7.6   0.0    0.0064       1.7      22      42 ..     519     539 ..     511     547 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.34
  PF02562.11 121 afvilDEaqnttkeqmkmfl 140
                 ++v+lDEaq+  + +m+ ++
  MMETSP1325-20131115|8441_1  75 CIVLLDEAQDDGNIKMNKVV 94 
                 799******87777766554 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.013
  PF02562.11  22 vfaiGpaGtGKTylavala 40 
                 v++ Gp G+GKT++a a+a
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVA 264
                 6789***********9998 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0064
  PF02562.11  22 vfaiGpaGtGKTylavalave 42 
                 v+  Gp G+GKT++a a+a e
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANE 539
                 7789***********999966 PP

>> PF09848.4  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1      0.13        34      36      93 ..      23      83 ..       4      92 .. 0.72
   2 !    8.2   0.0    0.0037      0.98       4      26 ..     246     274 ..     243     349 .. 0.69
   3 ?    4.9   0.0     0.037       9.9       5      43 ..     520     551 ..     516     574 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.13
   PF09848.4 36 flsgNhplvkvlrealakkl.ekkkkkeavkkpssfinnls..kaekkkpkedvvivDEAh 93
                +  +  p + ++ ea + ++   +  ++++++++ f  +    k +k k+++ +v++DEA+
  MMETSP1325-20131115|8441_1 23 MDKKRSPNRLIVDEAASDDNsVVSLSQKKMEELQLFRGDTVllKGKKGKQTVCIVLLDEAQ 83
                3344455666666666666666677778888888888777788899999***********9 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0037
   PF09848.4   4 ilvtGvaGtGKtvvalnllael......e 26 
                 +l  G +G+GKt++a ++++e        
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETgaffflI 274
                 6778*************999984444441 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.037
   PF09848.4   5 lvtGvaGtGKtvvalnllaeledseeertavflsgNhpl 43 
                 l  G +G GKt++a ++++e+       +a+f+s+ +p+
  MMETSP1325-20131115|8441_1 520 LFYGPPGCGKTLMAKAVANEC-------QANFISVKGPE 551
                 6689***************99.......55555555555 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0097       2.6       2      37 ..     246     280 ..     245     356 .. 0.72
   2 !    8.4   0.0     0.005       1.4       2      30 ..     519     547 ..     518     555 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0097
   PF07726.6   2 vllegvPGlaktllvkalakaldlefkriqftpdll 37 
                 vll g PG +ktl+++a+a+  ++ f  i   p+++
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGAFFFLIN-GPEIM 280
                 7999****************9988776654.45555 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.005
   PF07726.6   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vl+ g PG +ktl++ka+a+  +++f  +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANFISV 547
                 788999****************9999766 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.22        58       2      22 ..     246     266 ..     245     276 .. 0.86
   2 ?    1.8   0.1      0.57   1.5e+02      83     116 ..     289     323 ..     282     354 .. 0.72
   3 ?   -1.9   0.0       8.1   2.2e+03      85     110 ..     361     386 ..     324     392 .. 0.77
   4 !    8.6   0.0    0.0046       1.2       6      32 ..     523     549 ..     519     554 .. 0.93

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.22
                 EEEE-------HHHHHHHHHH CS
  PF03266.10   2 vfiTGepgvGKtTlvkkvlel 22 
                 v++ G+pg+GKt + + v+++
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANE 266
                 5788********999999876 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.57
                 HHHHHHHHHHH.HHH-EEEE------GGG-HHHHH CS
  PF03266.10  83 elalpalrnal.eeadviviDEIGkmElkskkfke 116
                 + + +a+++a  + + +i+iDEI ++  k  k   
  MMETSP1325-20131115|8441_1 289 SNLRKAFEEAEkNAPSIIFIDEIDSIAPKRDKTNG 323
                 5555667777645666*******776655555555 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 8.1
                 HHHHHHHHHHHH-EEEE------GGG CS
  PF03266.10  85 alpalrnaleeadviviDEIGkmElk 110
                 al+ + + ++e d+ v DE G++E +
  MMETSP1325-20131115|8441_1 361 ALRRFGRFDREIDIGVPDENGRLEIF 386
                 45555566688889999999999876 PP

  == domain 4    score: 8.6 bits;  conditional E-value: 0.0046
                 -------HHHHHHHHHH-...---EE- CS
  PF03266.10   6 GepgvGKtTlvkkvlellksegvkvgG 32 
                 G+pg GKt + k v+++++++ ++v+G
  MMETSP1325-20131115|8441_1 523 GPPGCGKTLMAKAVANECQANFISVKG 549
                 9********************999999 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.048        13      18      40 ..     243     265 ..     233     278 .. 0.83
   2 !    8.6   0.0    0.0041       1.1      11      49 ..     509     547 ..     504     553 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.048
   PF13604.1  18 drvavvqGpAGtGKttvlkalre 40 
                  r +++ Gp+G+GKt + +a+++
  MMETSP1325-20131115|8441_1 243 PRGVLLYGPPGSGKTLIARAVAN 265
                 5567788**********999875 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0041
   PF13604.1  11 eavltsgdrvavvqGpAGtGKttvlkalrealeaagkrv 49 
                 e++ +s+++ ++  Gp+G GKt + ka+++ ++a+  +v
  MMETSP1325-20131115|8441_1 509 EKFGMSPSKGVLFYGPPGCGKTLMAKAVANECQANFISV 547
                 55667777888899****************999976665 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.9     1e+03      48      93 ..      55      99 ..      27     111 .. 0.76
   2 ?    5.4   0.0     0.025       6.7      51      78 ..     241     268 ..     201     354 .. 0.85
   3 !    8.2   0.0    0.0034       0.9      51      81 ..     514     544 ..     458     584 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 3.9
   PF05673.8 48 lkglpannvLLwGarGtGKSslvkallneyaeeg.Lrlievekedlk 93
                l+  +   vLL G++  GK +++  ll e +++g +++ +v +++l+
  MMETSP1325-20131115|8441_1 55 LQLFRGDTVLLKGKK--GKQTVCIVLLDEAQDDGnIKMNKVVRKNLR 99
                555567789999998..588888889999888887888888888775 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.025
   PF05673.8  51 lpannvLLwGarGtGKSslvkallneya 78 
                 +p + vLL+G  G+GK  + +a+ ne+ 
  MMETSP1325-20131115|8441_1 241 KPPRGVLLYGPPGSGKTLIARAVANETG 268
                 56678******************99875 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.0034
   PF05673.8  51 lpannvLLwGarGtGKSslvkallneyaeeg 81 
                  p++ vL++G  G+GK  + ka+ ne++++ 
  MMETSP1325-20131115|8441_1 514 SPSKGVLFYGPPGCGKTLMAKAVANECQANF 544
                 58899*********************99875 PP

>> PF01202.17  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0      0.02       5.4       1      21 [.     252     272 ..     252     301 .. 0.86
   2 ?    7.2   0.0     0.014       3.8       1      22 [.     525     546 ..     525     570 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.02
                 -----HHHHHHHHHHT--EEE CS
  PF01202.17   1 mGaGKstvGkllAkalglefi 21 
                 +G+GK+ +++++A++ g  f+
  MMETSP1325-20131115|8441_1 252 PGSGKTLIARAVANETGAFFF 272
                 7*************9998775 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.014
                 -----HHHHHHHHHHT--EEEE CS
  PF01202.17   1 mGaGKstvGkllAkalglefiD 22 
                 +G+GK+  +k++A++ + +fi 
  MMETSP1325-20131115|8441_1 525 PGCGKTLMAKAVANECQANFIS 546
                 7*****************9996 PP

>> PF09336.5  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   7.3e-05      0.02      19      59 ..     727     766 ..     719     768 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 7.3e-05
                 CS-GGGB----B-HHHHHHHHHCS--SS-HHHHHHHHHHHH CS
   PF09336.5  19 dleeekllePpvtlkDflkalkttkptVskeDlekheeFtk 59 
                 d+ee++  +P +  k+f++a+++++ +Vs++ l k+  F +
  MMETSP1325-20131115|8441_1 727 DVEEDD-PVPYIGPKHFEEAVRASRRSVSEASLAKYASFAQ 766
                 555544.4799***************************976 PP

>> PF03152.9  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0     5e-05     0.014      53     160 ..      66     178 ..      40     191 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5e-05
   PF03152.9  53 neaakkvthcgVL.EFiaeeGtiylpewmmenlgleegdlveve.svslpkgkfvklqpqskdfldis.npkav.LetaL.rnfstLtkgdvieieyndkkyelkivevkpan 160
                 + ++ k+t c VL +   ++G i + + + +nl ++ gd v+v+ + ++p gk v + p    +  ++ n   v L+ ++ + +  + kgd + ++ + +  e+k+ve+ p+ 
  MMETSP1325-20131115|8441_1  66 KGKKGKQTVCIVLlDEAQDDGNIKMNKVVRKNLRVRLGDCVTVTsHGDVPYGKRVHVLPIDDTIEGVTgNLFDVyLKPYFlEAYRPVQKGDLFLVRQAMHPVEFKVVETDPSP 178
                 34666777777752667789***********************95579***********999998866266677788776599***************************986 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.049        13       4      23 ..     246     265 ..     244     280 .. 0.81
   2 ?    3.6   0.0      0.11        28       4      22 ..     519     537 ..     516     547 .. 0.85
   3 ?    0.4   0.0      0.99   2.7e+02     231     288 ..     562     632 ..     546     640 .. 0.70

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.049
   PF12846.2   4 tlilGppGsGKSvllkklvl 23 
                 +l++GppGsGK+  +++++ 
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVAN 265
                 6899********98887754 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.11
   PF12846.2   4 tlilGppGsGKSvllkklv 22 
                 +l++GppG+GK+  +k+++
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVA 537
                 689*********9999875 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.99
   PF12846.2 231 aaarrnfrapkdlrdkllviDEahrllgspega.............dfldelaregRkfgvgiilatQsls 288
                 a +r+ f++ +++++ +l++DE+  ++++  g              ++l e+   g k +v +i at  ++
  MMETSP1325-20131115|8441_1 562 ANVRELFEKARSAAPCVLFFDELDSIASARGGSsgdgggaadrvinQILTEIDGVGAKKNVFVIGATNRPD 632
                 677889999999999*********99977444223333335556656666666677777777777777665 PP

>> PF02367.12  Uncharacterised P-loop hydrolase UPF0079
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.019       5.1      18      40 ..     246     268 ..     234     277 .. 0.87
   2 ?    4.4   0.0     0.087        23      16      42 ..     517     543 ..     508     555 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.019
  PF02367.12  18 vlLsGdlGaGKTtlvkglakglg 40 
                 vlL G+ G+GKT +++++a++ g
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETG 268
                 89***************998765 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.087
  PF02367.12  16 dvvlLsGdlGaGKTtlvkglakglgvk 42 
                 + vl  G+ G GKT ++k++a++ + +
  MMETSP1325-20131115|8441_1 517 KGVLFYGPPGCGKTLMAKAVANECQAN 543
                 568899**************9988654 PP

>> PF08433.5  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.026       7.1       4      25 ..     246     267 ..     245     354 .. 0.75
   2 ?    4.6   0.0     0.054        15       4      31 ..     519     546 ..     518     571 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.026
   PF08433.5   4 vvltGlPssGKstvakeLakal 25 
                 v+l G P sGK+ +a+  a++ 
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANET 267
                 799*************998775 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.054
   PF08433.5   4 vvltGlPssGKstvakeLakaleeegrs 31 
                 v++ G P  GK+ +ak  a++ +++ +s
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANFIS 546
                 799***************9998886555 PP

>> PF05707.7  Zonular occludens toxin (Zot)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.018       4.8       4      98 ..     247     321 ..     246     365 .. 0.56
   2 ?    1.5   0.0      0.57   1.5e+02       4      17 ..     520     533 ..     519     549 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.018
   PF05707.7   4 lvtGkpGsGKtleaVskdilpalkeGrkvitnidgLk.leriekvlgekvkarlidisnpegeelekyldkwrtldkgallviDEcqqifpvrage 98 
                 l +G pGsGKtl a         +e   +++ i+g + + +++    e+             ++l k++++  + +  ++++iDE   i p+r + 
  MMETSP1325-20131115|8441_1 247 LLYGPPGSGKTLIARAV-----ANETGAFFFLINGPEiMSKMAG---ES------------ESNLRKAFEEAEK-NAPSIIFIDEIDSIAPKRDKT 321
                 67999999999876443.....3344455555664443333333...22............2234444444444.455777777777777777664 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.57
   PF05707.7   4 lvtGkpGsGKtlea 17 
                 l++G pG GKtl a
  MMETSP1325-20131115|8441_1 520 LFYGPPGCGKTLMA 533
                 789********976 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.19        52      48      71 ..     246     269 ..     236     321 .. 0.80
   2 ?    7.4   0.0    0.0053       1.4      48     100 ..     519     570 ..     510     595 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.19
  PF03215.10  48 llltGPsGcgKsTtvkvlskelgi 71 
                 +ll GP+G+gK+ + + ++ e g 
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETGA 269
                 6899********999999998876 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0053
  PF03215.10  48 llltGPsGcgKsTtvkvlskelgikliewlnpvslkepdnehqksdfkgltek 100
                 +l  GP+GcgK+   k ++ e   ++i    p++l    +   + +++ l+ek
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTM-WFGESEANVRELFEK 570
                 5678********************9999988887653.344455555555555 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.038        10      20      42 ..     246     316 ..     236     455 .. 0.62
   2 ?    4.2   0.0     0.095        26      20      40 ..     519     539 ..     506     591 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.038
   PF13086.1  20 tliqGpPgtGKtttivelisql................................................l 42 
                  l+ GpPg+GKt    ++ ++                                                 +
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAVANETgaffflingpeimskmagesesnlrkafeeaeknapsiifideidsiaP 316
                 699*********66666655556666666666666666666555555555555544444444444444440 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.095
   PF13086.1  20 tliqGpPgtGKtttivelisq 40 
                  l  GpPg+GKt +  ++ ++
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANE 539
                 799*********554444444 PP

>> PF01568.16  Molydopterin dinucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0    0.0027      0.73      27      75 ..      40      90 ..      28      93 .. 0.79
   2 ?    2.0   0.0      0.59   1.6e+02      24      54 ..      81     111 ..      78     120 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0027
                SSS.-EEEEHHHHHH-------EEEEEESSE.EEEEEEEEESSB----EEE CS
  PF01568.16 27 pep.vveinpedaaalgikdGdlVevesrrG.svvvkakvtervrpgvvfm 75
                 ++ vv ++++++++l +  Gd+V ++ ++G ++v+ + ++e+   g + m
  MMETSP1325-20131115|8441_1 40 DDNsVVSLSQKKMEELQLFRGDTVLLKGKKGkQTVCIVLLDEAQDDGNIKM 90
                3336***************************66666677777777777766 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.59
                 GGSSSS-EEEEHHHHHH-------EEEEEES CS
  PF01568.16  24 laepepvveinpedaaalgikdGdlVevesr 54 
                 +a+ ++ + +n+   + l ++ Gd V+v+s 
  MMETSP1325-20131115|8441_1  81 EAQDDGNIKMNKVVRKNLRVRLGDCVTVTSH 111
                 556666999********************96 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.022       5.9      22      39 ..     244     259 ..     234     265 .. 0.77
   2 ?    3.0   0.0      0.24        65      19      39 ..     513     532 ..     506     538 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.022
   PF13555.1  22 kgkntlltGasGsGKSTl 39 
                 +g  +ll G+ GsGK+ +
  MMETSP1325-20131115|8441_1 244 RG--VLLYGPPGSGKTLI 259
                 45..9**********755 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.24
   PF13555.1  19 idpkgkntlltGasGsGKSTl 39 
                 ++p+ k +l+ G+ G GK+ +
  MMETSP1325-20131115|8441_1 513 MSPS-KGVLFYGPPGCGKTLM 532
                 5554.37***********755 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.035       9.4      22      39 ..     246     263 ..     241     334 .. 0.88
   2 ?    3.4   0.0      0.28        74      22      38 ..     519     535 ..     507     537 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.035
   PF13476.1  22 tlItGpNGsGKTTildAi 39 
                 +l++Gp GsGKT i  A 
  MMETSP1325-20131115|8441_1 246 VLLYGPPGSGKTLIARAV 263
                 589***********9996 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.28
   PF13476.1  22 tlItGpNGsGKTTildA 38 
                 +l++Gp G+GKT + +A
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKA 535
                 59**********88877 PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.084        22      15      32 ..     244     261 ..     231     268 .. 0.85
   2 ?    0.7   0.0         1   2.7e+02     107     167 ..     284     354 ..     260     360 .. 0.63
   3 ?    1.1   0.0      0.76     2e+02      15      33 ..     517     535 ..     509     549 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.084
                 -EEEEEC-TT---HHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
  PF00270.24  15 gdvlvaaeTGsGKTlafl 32 
                 + vl+ ++ GsGKTl++ 
  MMETSP1325-20131115|8441_1 244 RGVLLYGPPGSGKTLIAR 261
                 67999**********985 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 1
                 HHHHHHHHHH.CCHHTTT.EEEEEECTHHHHHCTTTHH........HHHHHHHHSHHTTTSE.EEEEESS-T CS
                 xxxxxxxxxx.xxxxxxx.xxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxx.xxxxxxxxx RF
  PF00270.24 107 pgrlddlvst.gklnlsq.vrllVlDEadrllsqgfsd........qlnqilqilcdgkrlq.vivlSATlp 167
                  g   + +++  +   ++  +++ +DE+d +  +   +         + q+l +++ +k++  v+v+ AT  
  MMETSP1325-20131115|8441_1 284 AGESESNLRKaFEEAEKNaPSIIFIDEIDSIAPKRD-KtngeverrIVSQMLTLMDGLKSRAnVVVIGATNR 354
                 5555555555322222444788889******99522.23565555556667777766666555999999965 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.76
                 -EEEEEC-TT---HHHHHH CS
                 xxxxxxxxxxxxxxxxxxx RF
  PF00270.24  15 gdvlvaaeTGsGKTlafli 33 
                 + vl  ++ G GKTl++  
  MMETSP1325-20131115|8441_1 517 KGVLFYGPPGCGKTLMAKA 535
                 679999*********9865 PP

>> PF07693.9  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.78   2.1e+02      18      37 ..     241     260 ..     229     275 .. 0.76
   2 ?    5.6   0.0     0.022       5.8     161     191 ..     289     321 ..     272     365 .. 0.74
   3 ?    0.3   0.0      0.91   2.4e+02      23      48 ..     519     562 ..     509     695 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.78
   PF07693.9  18 atpiviglyGkWGsGKssll 37 
                 ++p  + lyG+ GsGK+ + 
  MMETSP1325-20131115|8441_1 241 KPPRGVLLYGPPGSGKTLIA 260
                 6778899**********765 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.022
   PF07693.9 161 adiekkLda..lqkrlVvviDdLDRcepeevle 191
                 +++ k++++  ++ + +++iD++D++ p++ ++
  MMETSP1325-20131115|8441_1 289 SNLRKAFEEaeKNAPSIIFIDEIDSIAPKRDKT 321
                 33344444466799************9987555 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.91
   PF07693.9  23 iglyGkWGsGKssllnlledelkef..................k 48 
                 +  yG+ G+GK+ + + + +e + +                  +
  MMETSP1325-20131115|8441_1 519 VLFYGPPGCGKTLMAKAVANECQANfisvkgpelltmwfgeseA 562
                 66688889999999998888877664555544444444444441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (845 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       503  (0.0367905); expected 273.4 (0.02)
Passed bias filter:                      451  (0.0329871); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                        51  (0.00373025); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              51  [number of targets reported over threshold]
# CPU time: 1.70u 0.38s 00:00:02.08 Elapsed: 00:00:00.93
# Mc/sec: 2177.34
//
Query:       MMETSP1325-20131115|8458_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 723.90
//
Query:       MMETSP1325-20131115|8447_1  [L=547]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.80u 0.37s 00:00:01.17 Elapsed: 00:00:00.56
# Mc/sec: 2299.66
//
Query:       MMETSP1325-20131115|8461_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        37  (0.00270626); expected 273.4 (0.02)
Passed bias filter:                       35  (0.00255998); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 153.37
//
Query:       MMETSP1325-20131115|8455_1  [L=449]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-20   71.2   0.0    1.1e-19   70.2   0.0    1.5  2  PF02204.13 Vacuolar sorting protein 9 (VPS9) domain


Domain annotation for each model (and alignments):
>> PF02204.13  Vacuolar sorting protein 9 (VPS9) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0      0.96   1.3e+04       7      35 ..     116     144 ..     112     156 .. 0.72
   2 !   70.2   0.0     8e-24   1.1e-19       5     103 ..     233     331 ..     229     332 .. 0.97

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 0.96
  PF02204.13   7 eLkklneakspreKlncivrackeitsav 35 
                  Lk+ +ea +p + ++ ++ + +e+++a 
  MMETSP1325-20131115|8455_1 116 ALKSPHEADKPWNIIRSFLGVLNELMKAS 144
                 56666777778888888888888877765 PP

  == domain 2    score: 70.2 bits;  conditional E-value: 8e-24
  PF02204.13   5 seeLkklneakspreKlncivrackeitsavsssskgeslgaDdlLPiliyvviksnppnllsnvqyiqefrskkllsgeegYylttlqaavefienle 103
                 + +L+ ++ a  p+ K+n i+ +  ei +++++ ++g   +aDd+LP +i+vv  +npp+l+s++ +iq++  + ll +e g y+t++q+av f+e+l+
  MMETSP1325-20131115|8455_1 233 ISCLRAMSTAVGPSAKINKILDCAHEINRVLRQGNNGVLPSADDFLPAMILVVKLANPPRLMSTLSFIQQYCPAYLLMSEPGCYFTHVQSAVFFLEQLD 331
                 5799********************************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.50
# Mc/sec: 2151.93
//
Query:       MMETSP1325-20131115|8463_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 630.35
//
Query:       MMETSP1325-20131115|8460_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|8464_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0038   17.2   0.0     0.0047   16.9   0.0    1.1  1  PF00178.17 Ets-domain
  ------ inclusion threshold ------
      0.089   12.2   0.4      0.095   12.1   0.3    1.0  1  PF04156.9  IncA protein
       0.12   10.9   0.9       0.13   10.7   0.7    1.0  1  PF05055.7  Protein of unknown function (DUF677)


Domain annotation for each model (and alignments):
>> PF00178.17  Ets-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     1e-06    0.0047      37      73 ..      34      73 ..      20      77 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1e-06
                HHHHHH---TTS.-TT--HHHHC---GGGT..TTTSEEE- CS
  PF00178.17 37 eevarlWGerkn.kkkmnYdklsRalRyYy..kkniikkv 73
                e +a l G +   + +m+Y+kl Ral+     ++++ikkv
  MMETSP1325-20131115|8464_1 34 EVLANLVGDKSLeRFRMEYEKLHRALKRSHehERKLIKKV 73
                668999999876699***********86541156678887 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   2.1e-05     0.095     130     187 ..      16      79 ..       6      81 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.1e-05
   PF04156.9 130 erlesleesikelakeirelr......eeisdlkeevqelrselerlqedlqrlqeklaelqrl 187
                 e+ e  ++++++l+++++e++      +++++ + e ++l  +l+r+ e+ + l +k+ el+++
  MMETSP1325-20131115|8464_1  16 EEPEFSASAFEALERDFQEVLanlvgdKSLERFRMEYEKLHRALKRSHEHERKLIKKVRELNTE 79 
                 566788999**************************************************99986 PP

>> PF05055.7  Protein of unknown function (DUF677)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.7   2.9e-05      0.13     116     178 ..      14      78 ..       5      80 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 2.9e-05
   PF05055.7 116 Gkkkkkye.kTleeL.kkFkamgdpfdgeefltkFksvykeqvllleklrktkkkldkklrnikt 178
                 G ++ ++    +e L + F+++  +  g++ l++F + y+++   l++ +++ +kl kk+r ++t
  MMETSP1325-20131115|8464_1  14 GDEEPEFSaSAFEALeRDFQEVLANLVGDKSLERFRMEYEKLHRALKRSHEHERKLIKKVRELNT 78 
                 555555541356666457*******************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1012  (0.0740199); expected 273.4 (0.02)
Passed bias filter:                      791  (0.0578555); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.44s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 366.24
//
Query:       MMETSP1325-20131115|8465_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0023   16.8   0.5     0.0028   16.5   0.4    1.1  1  PF04346.7  Ethanolamine utilisation protein, EutH
  ------ inclusion threshold ------
      0.034   12.9   0.4       0.04   12.7   0.3    1.1  1  PF00916.15 Sulfate transporter family


Domain annotation for each model (and alignments):
>> PF04346.7  Ethanolamine utilisation protein, EutH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.4   4.1e-07    0.0028     153     205 ..      44      98 ..      28     113 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 4.1e-07
   PF04346.7 153 gvlvgglva..gldialilrnlvpviivavllalgLkkipeamikgflvfgkivv 205
                 gv+  + ++  g  + +il nlv +++++ l+  g+ +++e m+k+f   g+  +
  MMETSP1325-20131115|8465_1  44 GVMFETSYVqpGTYWYEILGNLVLILVITSLVYYGIVFWSEVMVKLFPGCGHRCN 98 
                 3333333223458899*******************************98886554 PP

>> PF00916.15  Sulfate transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3   5.8e-06      0.04      59     116 ..      25      82 ..       2      93 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.8e-06
  PF00916.15  59 lvdtlanwetlviglsvliflliikllpkrlkklfvvsapaplvavivatlisllf..la 116
                 + +++   ++l+++++ + +  ++++ +   +  +++ +  +lv+++v+t ++++   ++
  MMETSP1325-20131115|8465_1  25 NWNQV--EANLLMSCVLVSVFGVMFETSYVQPGTYWYEILGNLVLILVITSLVYYGivFW 82 
                 33332..256788888888899999999999********************999765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 590.53
//
Query:       MMETSP1325-20131115|8466_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|8468_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-07   30.7   0.0      9e-07   27.7   0.0    1.9  1  PF03982.8 Diacylglycerol acyltransferase


Domain annotation for each model (and alignments):
>> PF03982.8  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   6.6e-11     9e-07     180     286 ..       5      98 ..       1     106 [. 0.83

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 6.6e-11
   PF03982.8 180 adLvPvysfGendvykqvenpkgsklrkvqeklkkvlglsppilyGrglfnsltlGllPfrkpittvvGkPiev...tkteePtkeeidelhakYveaLaeLfeehkekf 286
                  d+vP+y fGen+++   +   g++      ++ k l++ +p++  r             +  ++ v G+Pi     t  + Pt+ e++ + + Y  +L+ Lf+eh +k+
  MMETSP1325-20131115|8468_1   5 LDIVPLYGFGENQIFTTHTLLGGLRR-----MIAKHLRVGLPLILPRLA-----------STHVQHVFGRPIACggrTTCNPPTDAEVEAIAELYAAELRRLFDEHAHKW 98 
                 589************98877666654.....889999999999999533...........457999******97443566789***********************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 708.01
//
Query:       MMETSP1325-20131115|8467_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-15   55.5   1.1    1.7e-06   27.3   0.0    4.5  5  PF12799.2  Leucine Rich repeats (2 copies)
    3.1e-11   41.5   0.5       0.29   11.2   0.0    6.6  7  PF00560.28 Leucine Rich Repeat
    6.2e-10   38.5   2.7    9.3e-05   21.9   0.0    3.8  4  PF13855.1  Leucine rich repeat
    2.5e-07   29.6   5.3        3.1    8.2   0.0    6.6  7  PF13504.1  Leucine rich repeat
    6.1e-07   28.7   3.6       0.25   11.4   0.1    6.1  7  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         2   5.4e+03      25      35 ..     104     114 ..     104     116 .. 0.69
   2 !   13.3   0.0   1.5e-05     0.041       1      36 [.     128     170 ..     128     179 .. 0.81
   3 !   27.3   0.0   6.3e-10   1.7e-06       3      43 ..     185     226 ..     184     227 .. 0.89
   4 !   10.2   0.0   0.00015      0.41      15      37 ..     221     242 ..     220     251 .. 0.88
   5 !    7.9   0.0   0.00078       2.1       1      39 [.     229     267 ..     229     270 .. 0.87

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 2
   PF12799.2  25 nLktLnLsnNp 35 
                 +L +L Lsn  
  MMETSP1325-20131115|8467_1 104 KLVELKLSNAG 114
                 67788888765 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 1.5e-05
   PF12799.2   1 tnLevLdLsnNnIkd......lppel.anLpnLktLnLsnNpi 36 
                 ++Le+ d s N +++        p l a+L+ L++LnL++N +
  MMETSP1325-20131115|8467_1 128 PSLETMDVSFNGLESdefqsiFRPRLtASLSALRVLNLAGNYL 170
                 68999999***999556555444557778************87 PP

  == domain 3    score: 27.3 bits;  conditional E-value: 6.3e-10
   PF12799.2   3 LevLdLsnNnIk.dlppelanLpnLktLnLsnNpis.dlsaLa 43 
                 L++L+L +N++   l++ la+L nLk+L++s+N ++ +l +L+
  MMETSP1325-20131115|8467_1 185 LRELYLGDNQLGgTLEG-LAGLANLKVLSMSGNLFYgSLAPLS 226
                 9**********978***.***************7643888875 PP

  == domain 4    score: 10.2 bits;  conditional E-value: 0.00015
   PF12799.2  15 dlppelanLpnLktLnLsnNpis 37 
                 +l p l++Lp+L+ L +++N ++
  MMETSP1325-20131115|8467_1 221 SLAP-LSGLPKLQRLLVARNGFQ 242
                 6889.***************986 PP

  == domain 5    score: 7.9 bits;  conditional E-value: 0.00078
   PF12799.2   1 tnLevLdLsnNnIkd.lppelanLpnLktLnLsnNpisdl 39 
                 ++L+ L  ++N  ++   + l+ L +L+++++  Np+  +
  MMETSP1325-20131115|8467_1 229 PKLQRLLVARNGFQEgATE-LGALGDLQMIDVRDNPLGAV 267
                 79***********973666.****************9765 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.44   1.2e+03       1      13 [.     104     116 ..     104     125 .. 0.83
   2 ?    4.9   0.0     0.012        33       1      15 [.     129     145 ..     129     158 .. 0.77
   3 !   11.2   0.0   0.00011      0.29       2      22 .]     160     181 ..     159     181 .. 0.89
   4 !    7.2   0.0    0.0021       5.7       2      17 ..     185     201 ..     184     205 .. 0.81
   5 !    6.3   0.0     0.004        11       1      21 [.     207     227 ..     207     229 .. 0.78
   6 ?    0.0   0.0      0.47   1.3e+03       1      14 [.     230     243 ..     230     252 .. 0.82
   7 ?    1.3   0.0      0.18     5e+02       2      13 ..     254     265 ..     253     273 .. 0.85

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.44
                 TESEEEETSSBCB CS
  PF00560.28   1 nLeeLdLsgNnlt 13 
                 +L eL Ls+  l+
  MMETSP1325-20131115|8467_1 104 KLVELKLSNAGLC 116
                 6999****98776 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.012
                 TESEEEETSSBCBC..H CS
  PF00560.28   1 nLeeLdLsgNnlts..l 15 
                 +Le+ d+s+N l+s  +
  MMETSP1325-20131115|8467_1 129 SLETMDVSFNGLESdeF 145
                 69**********96462 PP

  == domain 3    score: 11.2 bits;  conditional E-value: 0.00011
                 ESEEEETSSBCB.CHHHHHHHH CS
  PF00560.28   2 LeeLdLsgNnlt.slppslsnL 22 
                 L++L+L gN l  +lp++ ++L
  MMETSP1325-20131115|8467_1 160 LRVLNLAGNYLRgTLPDEWGSL 181
                 9********9999***987765 PP

  == domain 4    score: 7.2 bits;  conditional E-value: 0.0021
                 ESEEEETSSBCB.CHHH CS
  PF00560.28   2 LeeLdLsgNnlt.slpp 17 
                 L+eL+L +N+l  +l  
  MMETSP1325-20131115|8467_1 185 LRELYLGDNQLGgTLEG 201
                 9**********877765 PP

  == domain 5    score: 6.3 bits;  conditional E-value: 0.004
                 TESEEEETSSBCB.CHHHHHHH CS
  PF00560.28   1 nLeeLdLsgNnlt.slppslsn 21 
                 nL++L++sgN +  sl p ls+
  MMETSP1325-20131115|8467_1 207 NLKVLSMSGNLFYgSLAP-LSG 227
                 8*********66558777.665 PP

  == domain 6    score: 0.0 bits;  conditional E-value: 0.47
                 TESEEEETSSBCBC CS
  PF00560.28   1 nLeeLdLsgNnlts 14 
                 +L++L + +N +++
  MMETSP1325-20131115|8467_1 230 KLQRLLVARNGFQE 243
                 69********9985 PP

  == domain 7    score: 1.3 bits;  conditional E-value: 0.18
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                 L+ +d+++N+l 
  MMETSP1325-20131115|8467_1 254 LQMIDVRDNPLG 265
                 899******997 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.092   2.5e+02      27      60 ..     105     139 ..     100     140 .. 0.63
   2 !   21.9   0.0   3.4e-08   9.3e-05       2      61 .]     129     195 ..     128     195 .. 0.76
   3 !   19.1   0.4   2.6e-07   0.00071       3      59 ..     185     239 ..     185     241 .. 0.87
   4 !   10.9   0.1   9.8e-05      0.27       2      60 ..     207     263 ..     206     264 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.092
   PF13855.1  27 LkvLdLsgnnl.ksispeafkgLpsLreLnLsgNr 60 
                 L +L+Ls+  l  +    a+++ psL+  ++s N 
  MMETSP1325-20131115|8467_1 105 LVELKLSNAGLcGEARHLALACSPSLETMDVSFNG 139
                 66677773333445555567777888888877775 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 3.4e-08
   PF13855.1   2 nLkeLdLsnNrlkvi......pdgaFkglsnLkvLdLsgnnl.ksispea..fkgLpsLreLnLsgNrl 61 
                 +L++ d+s+N l++       +++   +ls L+vL+L gn l  ++++e+  ++g+  LreL+L +N+l
  MMETSP1325-20131115|8467_1 129 SLETMDVSFNGLESDefqsifRPRLTASLSALRVLNLAGNYLrGTLPDEWgsLAGC--LRELYLGDNQL 195
                 566666665555432223336889999***************66999987668888..*********97 PP

  == domain 3    score: 19.1 bits;  conditional E-value: 2.6e-07
   PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnl.ksispeafkgLpsLreLnLsgN 59 
                 L+eL+L +N l    +  + gl nLkvL+ sgn    s+ p  ++gLp+L+ L +  N
  MMETSP1325-20131115|8467_1 185 LRELYLGDNQLGGTLE-GLAGLANLKVLSMSGNLFyGSLAP--LSGLPKLQRLLVARN 239
                 89*******9996554.4788**********8888889999..99********99888 PP

  == domain 4    score: 10.9 bits;  conditional E-value: 9.8e-05
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNr 60 
                 nLk+L  s+N l + +   ++gl++L+ L   +n  ++  +e+   L  L+++++++N+
  MMETSP1325-20131115|8467_1 207 NLKVLSMSGN-LFYGSLAPLSGLPKLQRLLVARNGFQEGATEL-GALGDLQMIDVRDNP 263
                 7888888888.44444447888888888888888887776654.667777777777776 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.31   8.6e+02       2      13 ..     104     115 ..     103     122 .. 0.83
   2 ?    2.3   0.0      0.11   2.9e+02       1      15 [.     128     142 ..     128     145 .. 0.90
   3 !    8.2   0.0    0.0011       3.1       2      17 .]     159     175 ..     158     175 .. 0.82
   4 !    8.1   0.1    0.0012       3.4       1      14 [.     183     196 ..     183     202 .. 0.86
   5 ?    4.3   0.0     0.023        62       2      11 ..     207     216 ..     206     229 .. 0.73
   6 ?    1.1   0.0      0.26     7e+02       1      14 [.     229     242 ..     229     249 .. 0.85
   7 ?   -1.9   0.0       2.6     7e+03       6      14 ..     257     265 ..     250     268 .. 0.73

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.31
   PF13504.1   2 nLkeLdLsgnrL 13 
                 +L eL Ls+ +L
  MMETSP1325-20131115|8467_1 104 KLVELKLSNAGL 115
                 7999****9776 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.11
   PF13504.1   1 pnLkeLdLsgnrLts 15 
                 p+L++ d+s n+L+s
  MMETSP1325-20131115|8467_1 128 PSLETMDVSFNGLES 142
                 799*********975 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.0011
   PF13504.1   2 nLkeLdLsgnrLt.sLP 17 
                  L++L+L+gn+L  +LP
  MMETSP1325-20131115|8467_1 159 ALRVLNLAGNYLRgTLP 175
                 79*********963576 PP

  == domain 4    score: 8.1 bits;  conditional E-value: 0.0012
   PF13504.1   1 pnLkeLdLsgnrLt 14 
                 ++L+eL+L +n+L 
  MMETSP1325-20131115|8467_1 183 GCLRELYLGDNQLG 196
                 58**********85 PP

  == domain 5    score: 4.3 bits;  conditional E-value: 0.023
   PF13504.1   2 nLkeLdLsgn 11 
                 nLk+L+ sgn
  MMETSP1325-20131115|8467_1 207 NLKVLSMSGN 216
                 9********9 PP

  == domain 6    score: 1.1 bits;  conditional E-value: 0.26
   PF13504.1   1 pnLkeLdLsgnrLt 14 
                 p+L++L +++n+++
  MMETSP1325-20131115|8467_1 229 PKLQRLLVARNGFQ 242
                 68*********985 PP

  == domain 7    score: -1.9 bits;  conditional E-value: 2.6
   PF13504.1   6 LdLsgnrLt 14 
                  d+++n+L 
  MMETSP1325-20131115|8467_1 257 IDVRDNPLG 265
                 588999986 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.26   7.1e+02       3      17 ..     104     118 ..     103     123 .. 0.80
   2 !    6.2   0.0    0.0044        12       2      22 ..     128     148 ..     126     150 .. 0.87
   3 ?    3.5   0.0     0.032        88       2      14 ..     158     170 ..     157     178 .. 0.85
   4 !   11.4   0.1   9.2e-05      0.25       3      24 .]     184     207 ..     182     207 .. 0.89
   5 ?    1.6   0.0      0.13   3.7e+02       3      12 ..     207     216 ..     205     222 .. 0.88
   6 ?   -0.8   0.0      0.79   2.2e+03       1      15 [.     228     242 ..     228     255 .. 0.73
   7 ?   -1.5   0.0       1.3   3.6e+03       5      15 ..     255     265 ..     246     267 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.26
   PF13516.1   3 nLtsLdLsnNqigde 17 
                 +L +L Lsn ++ +e
  MMETSP1325-20131115|8467_1 104 KLVELKLSNAGLCGE 118
                 5899****9888665 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0044
   PF13516.1   2 knLtsLdLsnNqigdeGlsaL 22 
                 ++L++ d+s+N++ ++  +++
  MMETSP1325-20131115|8467_1 128 PSLETMDVSFNGLESDEFQSI 148
                 89***********99887766 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.032
   PF13516.1   2 knLtsLdLsnNqi 14 
                 + L++L+L +N +
  MMETSP1325-20131115|8467_1 158 SALRVLNLAGNYL 170
                 679********87 PP

  == domain 4    score: 11.4 bits;  conditional E-value: 9.2e-05
   PF13516.1   3 nLtsLdLsnNqigd..eGlsaLan 24 
                 +L++L L++Nq+g+  eGl +Lan
  MMETSP1325-20131115|8467_1 184 CLRELYLGDNQLGGtlEGLAGLAN 207
                 69**********998899999986 PP

  == domain 5    score: 1.6 bits;  conditional E-value: 0.13
   PF13516.1   3 nLtsLdLsnN 12 
                 nL++L +s+N
  MMETSP1325-20131115|8467_1 207 NLKVLSMSGN 216
                 9********9 PP

  == domain 6    score: -0.8 bits;  conditional E-value: 0.79
   PF13516.1   1 lknLtsLdLsnNqig 15 
                 l++L+ L + +N++ 
  MMETSP1325-20131115|8467_1 228 LPKLQRLLVARNGFQ 242
                 688999999999874 PP

  == domain 7    score: -1.5 bits;  conditional E-value: 1.3
   PF13516.1   5 tsLdLsnNqig 15 
                 + +d+ +N++g
  MMETSP1325-20131115|8467_1 255 QMIDVRDNPLG 265
                 44688999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.54
# Mc/sec: 1286.93
//
Query:       MMETSP1325-20131115|8471_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|8470_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0046   16.8   0.0     0.0068   16.3   0.0    1.3  1  PF09070.6 PFU (PLAA family ubiquitin binding)


Domain annotation for each model (and alignments):
>> PF09070.6  PFU (PLAA family ubiquitin binding)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     5e-07    0.0068      57     112 ..     112     168 ..      75     172 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 5e-07
                 SEEEEE--------EEEEE-TTS-HHHHHHHHHHHTT--G.GGHHHHHHHHHHH--- CS
   PF09070.6  57 DyvfdvdvedgkpklkLpynasdnpyeaAekFieknelsq.syldqvvnFilkntkg 112
                 D v+   ++ g+++  Lp+ +s +  ++AekF+++  +++ + ++ + + i ++ ++
  MMETSP1325-20131115|8470_1 112 DDVVVLSIDVGETTFTLPVQRSADYTHVAEKFCAQTGVANhECVEAITREIFTEFQK 168
                 44444444445888889******************9976515667777766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       929  (0.0679491); expected 273.4 (0.02)
Passed bias filter:                      604  (0.0441779); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 894.35
//
Query:       MMETSP1325-20131115|8474_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 370.76
//
Query:       MMETSP1325-20131115|8475_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|8473_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-29  100.1  18.1    2.6e-18   65.3   4.7    2.4  2  PF07496.10 CW-type Zinc Finger
  ------ inclusion threshold ------
      0.037   14.3   1.2      0.075   13.3   0.4    1.8  2  PF13397.1  Domain of unknown function (DUF4109)
        5.1    6.7  15.9       0.16   11.5   1.4    3.2  3  PF00628.24 PHD-finger


Domain annotation for each model (and alignments):
>> PF07496.10  CW-type Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   4.7   5.6e-22   2.6e-18       1      50 []      44      91 ..      44      91 .. 0.96
   2 !   40.4   2.4   3.4e-14   1.5e-10       2      49 ..     138     189 ..     137     190 .. 0.87

  Alignments for each domain:
  == domain 1    score: 65.3 bits;  conditional E-value: 5.6e-22
                SEEEE-TTT--EEEE-TTT----TTSS.---GGGSS-SSS-STTS--SS- CS
  PF07496.10  1 eywVQCdkClKWRklpeeveeirsklpekWfCsmnpdkaynsCsapeele 50
                ++wVQCdkC+KWR+l+  ++   +klp+kW+C mn+d+a+n+C apee+e
  MMETSP1325-20131115|8473_1 44 QTWVQCDKCSKWRRLTGVADV--DKLPKKWYCTMNNDPARNTCAAPEEEE 91
                58**************99999..************************986 PP

  == domain 2    score: 40.4 bits;  conditional E-value: 3.4e-14
                 EEEE-T..TT--EEEE-TTT----TTSS....---GGGSS.-SSS-STTS--SS CS
  PF07496.10   2 ywVQCd..kClKWRklpeeveeirsklpe...kWfCsmnp.dkaynsCsapeel 49 
                 + +QC+  +C KWR l ++ +   ++l e   +W+C mn+ d+a  sCsap+el
  MMETSP1325-20131115|8473_1 138 EYIQCCdpNCGKWRALHRSLDS--KTLAEragAWYCVMNTwDEALASCSAPQEL 189
                 5789998*************99..666665689*******88888*******96 PP

>> PF13397.1  Domain of unknown function (DUF4109)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.4   1.6e-05     0.075      29      93 ..      47     116 ..      23     123 .. 0.64
   2 ?   -1.6   0.0      0.69   3.2e+03      36      73 ..     178     213 ..     155     216 .. 0.60

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.6e-05
   PF13397.1  29 Ykcakghetevv..faaeaeiPevwecrrcGaeagldegeepe...ekkkekpyrtHldmlkERRseeel 93 
                  +c+k ++ +     a+ +++P++w c  +  +a+ + ++++e   ek+ ++  ++Hl     R   ++ 
  MMETSP1325-20131115|8473_1  47 VQCDKCSKWRRLtgVADVDKLPKKWYCTMNNDPARNTCAAPEEeetEKDPDQRLKAHLRLWVRRLQCQDT 116
                 555555555433115667899*************998555444000444566789999877666665555 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.69
   PF13397.1  36 etevvfaaeaeiPevwecrrcGaeagldegeepeekkk 73 
                 e   + +a +e+P  ++    G+++g++++e+  ++kk
  MMETSP1325-20131115|8473_1 178 EALASCSAPQELPLGYDRA--GSPSGVVDDEPSGHSKK 213
                 4444555666777766655..88888888887766644 PP

>> PF00628.24  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.4   3.5e-05      0.16       9      46 ..      41      74 ..      35      75 .. 0.77
   2 ?   -2.9   0.1       1.1   5.2e+03      27      38 ..      83      94 ..      82      98 .. 0.68
   3 ?    2.7   1.7      0.02        92      10      45 ..     136     171 ..     129     173 .. 0.52

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.5e-05
                CTTS-EEEBSSSSSEEETTTSSS-SSHHSHHSTTB-SC CS
  PF00628.24  9 deegelvlCdgCkewfHlkClglkleseekpegewlCe 46
                d ++++v+Cd+C++w  l  +   ++      ++w+C+
  MMETSP1325-20131115|8473_1 41 DMNQTWVQCDKCSKWRRLTGVADVDK----LPKKWYCT 74
                668899*********99888777744....33479996 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.1
                TTSSS-SSHHSH CS
  PF00628.24 27 kClglkleseek 38
                 C  +++e++ek
  MMETSP1325-20131115|8473_1 83 TCAAPEEEETEK 94
                577887776665 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.02
                 TTS-EEEBS.SSSSEE..ETTTSSS-SSHHSHHSTTB-S CS
  PF00628.24  10 eegelvlCd.gCkewf..HlkClglkleseekpegewlC 45 
                 e++ + +Cd +C++w   H +   l+ ++  +  g w+C
  MMETSP1325-20131115|8473_1 136 EQEYIQCCDpNCGKWRalHRS---LDSKTLAERAGAWYC 171
                 34445566778**88511443...222222333347777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1207.96
//
Query:       MMETSP1325-20131115|8477_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.061   13.5   0.6      0.066   13.5   0.4    1.1  1  PF03447.11 Homoserine dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF03447.11  Homoserine dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.4   4.8e-06     0.066      38      95 ..      21      78 ..       5      83 .] 0.81

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 4.8e-06
                HHHHHT--CB---HHHHHHHHS-EEEEE-S--TTT---HHHHHH---EEE----TGGG CS
  PF03447.11 38 rkallgdeavtldlddlvadlrvdvvVEcasseavaelvlkaLeagkhvvtankgAla 95
                r all++ +v++ ++d +++ rv vv +++ ++ v+++ ++ L+   ++v+a  gAl 
  MMETSP1325-20131115|8477_1 21 RLALLRNVQVHAAVFDQLRHWRVIVVEDLGDHALVEQHQQRRLADPLALVVAALGALR 78
                7889999999******9996655555555************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.44s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 390.00
//
Query:       MMETSP1325-20131115|8476_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 855.17
//
Query:       MMETSP1325-20131115|8478_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.64
# Mc/sec: 277.08
//
Query:       MMETSP1325-20131115|8479_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.59
# Mc/sec: 434.59
//
Query:       MMETSP1325-20131115|8480_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 162.61
//
Query:       MMETSP1325-20131115|8481_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-24   85.1   0.0    4.5e-24   84.7   0.0    1.1  1  PF13426.1  PAS domain
    8.8e-06   25.6   0.0    1.3e-05   25.1   0.0    1.3  1  PF08447.6  PAS fold
    1.7e-05   24.6   0.0    2.3e-05   24.2   0.0    1.2  1  PF08448.5  PAS fold
    9.1e-05   22.1   0.0    0.00012   21.6   0.0    1.1  1  PF00989.19 PAS fold


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.7   0.0   1.3e-27   4.5e-24       4     100 ..      40     139 ..      38     143 .. 0.95

  Alignments for each domain:
  == domain 1    score: 84.7 bits;  conditional E-value: 1.3e-27
   PF13426.1   4 ilildpd...gtilfaNeaalrllGytreevlgksirdlfpededeeavalleraleaggevevelelrrkdgeefpvevtvtpvrdedgevvgiivilr 100
                 ++i+dp+   ++i+fa++ +l l+Gy+ ++vlg+++r+l+++++d++av+++++a+++g +++v l ++r dg++f++++ v+p+rd+dg+vv++++++ 
  MMETSP1325-20131115|8481_1  40 FVITDPSlpdNPIVFASQGFLSLTGYQLDQVLGRNCRFLQGPETDPKAVEKIRNAVADGIDASVCLLNYRIDGSTFWNQFFVAPLRDSDGQVVNYVGVQC 139
                 5788888888**************************************************************************************9875 PP

>> PF08447.6  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   3.7e-09   1.3e-05       1      90 [.      52     137 ..      52     138 .. 0.90

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 3.7e-09
   PF08447.6   1 iiyvsprveeilGyspeel.gkssyedwldlvhpeDrervrealeelllkkgevysfeyRirrkdGeyrWveargrvirdengkpvrvigv 90 
                 i+++s+ +  ++Gy+ +++ g++    ++ l  pe  +++ e++++ + ++g   s+   + r dG++ W +    ++rd++g++v ++gv
  MMETSP1325-20131115|8481_1  52 IVFASQGFLSLTGYQLDQVlGRN----CRFLQGPETDPKAVEKIRN-AVADGIDASVCLLNYRIDGSTFWNQFFVAPLRDSDGQVVNYVGV 137
                 589****************8888....999****************.77777567777777778*************************98 PP

>> PF08448.5  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   6.7e-09   2.3e-05      14     102 ..      49     138 ..      33     144 .. 0.85

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 6.7e-09
   PF08448.5  14 dgrvlyaNaaaaelfgappeellGktlaellpee.daarleralrrvlegeepiefleelllpgeerhyelrllPlrdesGevigvlvis 102
                 d  +++a++ + +l g++ +++lG+ ++ l  +e d  ++e + ++v++g ++   l  ++ +g++ + ++++ Plrd++G+v+ ++++ 
  MMETSP1325-20131115|8481_1  49 DNPIVFASQGFLSLTGYQLDQVLGRNCRFLQGPEtDPKAVEKIRNAVADGIDASVCLLNYRIDGSTFWNQFFVAPLRDSDGQVVNYVGVQ 138
                 556899**********************4433336999999999999999888888888888*********************9999875 PP

>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   3.6e-08   0.00012       9     109 ..      35     137 ..      28     140 .. 0.76

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 3.6e-08
                 T--SBEEEES...----EEEETHHHHHHH-S-HHHHS---CCHHCSCCHCCTCCHHHHHHHHHH--ECEEEEECCS...SSSSEEEEEEEEEECS-S-E-.CEEEE CS
  PF00989.19   9 slpdpifvvD...edgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfkl..rdgrpihlevraspvrdaggeilgflgv 109
                 ++    +++D    d  i+++++ + +l+G++ ++vlg++   l  +e+   +++++e+ +++  ++ +  +++     dg++++ +  ++p+rd +g++  ++gv
  MMETSP1325-20131115|8481_1  35 TAQQNFVITDpslPDNPIVFASQGFLSLTGYQLDQVLGRNCRFLQGPET---DPKAVEKIRNAVADGIDASVCLLNyrIDGSTFWNQFFVAPLRDSDGQVVNYVGV 137
                 555555566666667889***********************96665555...666666666666666666666655666*******************99877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 695.87
//
Query:       MMETSP1325-20131115|8483_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 452.14
//
Query:       MMETSP1325-20131115|8484_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-18   65.8   0.5    3.7e-18   65.4   0.3    1.1  1  PF09113.5 Peptide-N-glycosidase F, C terminal


Domain annotation for each model (and alignments):
>> PF09113.5  Peptide-N-glycosidase F, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.3   2.7e-22   3.7e-18      11     105 ..      37     132 ..      23     137 .. 0.90

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 2.7e-22
                 --EEEEE--TT-.SEEEEEEEEE------B---SSS-EEEEEEETTEEE...EEEEE-----TT-S------...---SS---------B-.--EEEE--G CS
   PF09113.5  11 dltvsfelpana.kkveLvaiitGHGsdesgcaEfcekthtvlvngkev...fqfapgrlgCasnrkenqap..sGtwllsrsgWCpGsevkpeeidltda 105
                 + t ++e+p++a  kv L aii+GHG    +c Ef ++ h   vng+e    f  a ++ gC+++++e+ +p  +Gt +++r+gWC+G  v+p +id+td 
  MMETSP1325-20131115|8484_1  37 NRTSNIETPKDApGKVILEAIISGHG----DC-EFEPTAHFWEVNGNEYnvsFFGAGTAYGCQDQAIEGSEPneHGTNWYGRDGWCDGAPVTPHYIDVTDS 132
                 477899999998459***********....77.9**************99998889******************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 666.19
//
Query:       MMETSP1325-20131115|8485_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-06   26.9   0.0    5.6e-06   26.6   0.0    1.1  1  PF13637.1  Ankyrin repeats (many copies)
    5.5e-06   26.5   0.0    5.7e-06   26.4   0.0    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
  ------ inclusion threshold ------
      0.011   15.8   0.0       0.24   11.5   0.0    2.0  2  PF13857.1  Ankyrin repeats (many copies)
      0.011   15.3   0.0        1.8    8.4   0.0    2.5  2  PF00023.25 Ankyrin repeat
       0.04   14.0   0.0       0.41   10.9   0.0    2.1  2  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   2.1e-09   5.6e-06       3      45 ..      21      65 ..      20      68 .] 0.91

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 2.1e-09
   PF13637.1  3 taLhyaaisgrlelvklLlekg.idinrt.desGntaLhiAalrg 45
                +aL+ aa+ g++++v+ ++++g +d+n+  +e+G+taL++ a+ g
  MMETSP1325-20131115|8485_1 21 SALRDAAKEGDVDTVQTMIDNGvVDLNAGaPEDGRTALIVTAKEG 65
                79*******************99***************9866655 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   2.1e-09   5.7e-06      16      73 ..       6      68 .]       1      68 [] 0.83

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 2.1e-09
   PF12796.2 16 Llekgadvdlget.....pLhlAaeagnleivklLleaga.dvnakd.kegntpLhlAvrnghle 73
                  +kg dv   +t     +L  Aa+ g++++v+ ++++g  d+na   ++g+t+L++ ++ g++e
  MMETSP1325-20131115|8485_1  6 AGAKGEDVV--STpdlesALRDAAKEGDVDTVQTMIDNGVvDLNAGApEDGRTALIVTAKEGKVE 68
                445777888..5555555*********************669***99************999876 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.9e-05      0.24      12      43 ..      17      47 ..       8      58 .. 0.75
   2 ?    6.0   0.0    0.0047        13       2      29 ..      39      67 ..      38      68 .] 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8.9e-05
   PF13857.1 12 tdeggntpLhlAakggalevvrlLl.apgadln 43
                 d++  ++L  Aak g+++ v+ ++ +  +dln
  MMETSP1325-20131115|8485_1 17 PDLE--SALRDAAKEGDVDTVQTMIdNGVVDLN 47
                4555..9******************65555665 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0047
   PF13857.1  2 lehg.padvnatdeggntpLhlAakggal 29
                +++g  + +    e g+t+L ++ak g +
  MMETSP1325-20131115|8485_1 39 IDNGvVDLNAGAPEDGRTALIVTAKEGKV 67
                67888888888888999********9876 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00064       1.8       4      25 ..      21      42 ..      18      49 .. 0.88
   2 ?    4.8   0.0     0.009        25       1      14 [.      53      66 ..      53      68 .] 0.86

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00064
                BHHHHHHHTTHHHHHHHHHHTT CS
  PF00023.25  4 TPLHlAalrgnlevvklLlsqG 25
                ++L  Aa+ g+++ v+  +++G
  MMETSP1325-20131115|8485_1 21 SALRDAAKEGDVDTVQTMIDNG 42
                67778***************99 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.009
                TSCBHHHHHHHTTH CS
  PF00023.25  1 dGfTPLHlAalrgn 14
                dG+T+L + a+ g 
  MMETSP1325-20131115|8485_1 53 DGRTALIVTAKEGK 66
                8******9999886 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00015      0.41       3      30 .]      20      48 ..      18      48 .. 0.89
   2 ?    1.0   0.0      0.23   6.2e+02       1      13 [.      53      65 ..      53      68 .] 0.74

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00015
   PF13606.1  3 nTpLhlAasngrielveaLleng.adina 30
                +++L  Aa+ g ++ v+ +++ng +d+na
  MMETSP1325-20131115|8485_1 20 ESALRDAAKEGDVDTVQTMIDNGvVDLNA 48
                789999*****************669996 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.23
   PF13606.1  1 nGnTpLhlAasng 13
                +G+T+L + a+ g
  MMETSP1325-20131115|8485_1 53 DGRTALIVTAKEG 65
                79***98776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.62
# Mc/sec: 262.83
//
Query:       MMETSP1325-20131115|8487_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 410.15
//
Query:       MMETSP1325-20131115|8486_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 269.06
//
Query:       MMETSP1325-20131115|8488_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       744  (0.0544178); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.54
# Mc/sec: 1051.73
//
Query:       MMETSP1325-20131115|8490_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.075   12.9   0.1      0.082   12.8   0.1    1.1  1  PF10025.4 Uncharacterized conserved protein (DUF2267)


Domain annotation for each model (and alignments):
>> PF10025.4  Uncharacterized conserved protein (DUF2267)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1     6e-06     0.082      15      56 ..      24      65 ..      11      67 .] 0.88

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6e-06
   PF10025.4 15 lddreeAeratravLrtLrdrlteeeaadlaaqLpeelrgll 56
                +++r+ A+r++ a L  L+d + +   +++ a L  el+ + 
  MMETSP1325-20131115|8490_1 24 IGQRRAAQRIMAAALKSLGDGVASATPEQVNAALVSELAKIA 65
                5679********************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.70
# Mc/sec: 229.37
//
Query:       MMETSP1325-20131115|8489_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.45s 00:00:00.88 Elapsed: 00:00:00.57
# Mc/sec: 834.59
//
Query:       MMETSP1325-20131115|8491_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-14   51.6   0.0    7.7e-14   51.3   0.0    1.1  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   5.6e-18   7.7e-14     174     260 .]       4     115 ..       1     115 [. 0.96

  Alignments for each domain:
  == domain 1    score: 51.3 bits;  conditional E-value: 5.6e-18
                 HHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH.........................HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 174 keytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks.........................eelkdlikkllekdpakRltaeeilkhpwl 260
                 + ytk+ DvWs+G+il+el+ ++++f+g+++++ql li++ l+k+ e  +   +++                          + ++dl++ ll +dp +R+ + ++l+hp+l
  MMETSP1325-20131115|8491_1   4 RSYTKALDVWSVGCILAELVGRRPIFPGSDSQNQLTLICEYLGKPSEALIGRVRNETirhfcrteiadrgsipflelypdavPAACDLLSHLLVFDPVERYDVCQALEHPYL 115
                 579******************************************99999999888899***************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 1001.14
//
Query:       MMETSP1325-20131115|8492_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.45s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 262.68
//
Query:       MMETSP1325-20131115|8497_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.40s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 207.38
//
Query:       MMETSP1325-20131115|8499_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.058   13.2   1.0      0.056   13.3   0.7    1.0  1  PF01543.12 Hepatitis C virus capsid protein


Domain annotation for each model (and alignments):
>> PF01543.12  Hepatitis C virus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.7   4.1e-06     0.056      53     101 ..       5      53 ..       1      56 [] 0.88

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.1e-06
  PF01543.12  53 ersqprgrrqpipkarrrearswlspGtlgpstalralvGrdGscglag 101
                  rs+ r r   +p + + +a   +     gp+ + +a+ G dG+ g  g
  MMETSP1325-20131115|8499_1   5 HRSRSRARPWSTPVSSEARAAVRIASAAEGPAASSHAAAGGDGVSGGGG 53 
                 6899999999999999999999999******************887555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 258.07
//
Query:       MMETSP1325-20131115|8501_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       595  (0.0435196); expected 273.4 (0.02)
Passed bias filter:                      487  (0.0356202); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 321.21
//
Query:       MMETSP1325-20131115|8502_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 225.81
//
Query:       MMETSP1325-20131115|8494_1  [L=577]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       542  (0.0396431); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.93u 0.40s 00:00:01.33 Elapsed: 00:00:00.56
# Mc/sec: 2425.79
//
Query:       MMETSP1325-20131115|8500_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      7e-05   21.9  14.6    0.00014   20.9  10.1    1.4  1  PF04886.7 PT repeat
  ------ inclusion threshold ------
      0.054   11.8   2.5      0.067   11.5   1.7    1.0  1  PF05786.9 Condensin complex subunit 2
       0.77    8.3   4.2        1.1    7.8   2.9    1.2  1  PF06286.6 Coleoptericin


Domain annotation for each model (and alignments):
>> PF04886.7  PT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9  10.1   3.1e-08   0.00014      12      28 ..     118     134 ..     116     135 .. 0.55

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 3.1e-08
   PF04886.7  12 vqPTgqPtaqPTdqPta 28 
                 +qPT+qPt+qPTdqPt+
  MMETSP1325-20131115|8500_1 118 QQPTNQPTNQPTDQPTD 134
                 45555555555555554 PP

>> PF05786.9  Condensin complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.7   1.5e-05     0.067     491     572 ..     121     197 ..     108     215 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.5e-05
   PF05786.9 491 lqkktkkrklLPtDfhfesdnLlklflkpkarlgkleqkkrasteseedideafyanekfadddsaavpnlqg..adsddddde 572
                 ++++t++ +  PtD +f+  +L++l+   ++  g++  + +   e +++ de+++++       +a  + +q+    +d++dd+
  MMETSP1325-20131115|8500_1 121 TNQPTNQPTDQPTDXQFQHMQLIQLQQMAEVSNGAF--DIHFGDEPSGEEDEHDHDDDG-----EAVLSLGQEdeDSEDEEDDD 197
                 45566666558***************9999999976..677777777899999887766.....33333332200222222222 PP

>> PF06286.6  Coleoptericin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.9   0.00024       1.1     331     366 ..     162     197 ..     147     206 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00024
   PF06286.6 331 detfwefdphteddddkpvlrlrrsddedeeeeedq 366
                 de   e d h  ddd + vl l + d++ e+ee+d+
  MMETSP1325-20131115|8500_1 162 DEPSGEEDEHDHDDDGEAVLSLGQEDEDSEDEEDDD 197
                 6777799***************99877777666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       623  (0.0455676); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1111.91
//
Query:       MMETSP1325-20131115|8507_1  [L=404]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.007   16.5   7.2       0.28   11.4   0.0    2.9  2  PF02465.13 Flagellar hook-associated protein 2 C-terminus
  ------ inclusion threshold ------
       0.12   10.9  20.8     0.0094   14.5   4.9    2.5  2  PF08317.6  Spc7 kinetochore protein
       0.17   11.8   0.2        0.4   10.6   0.1    1.6  1  PF01535.15 PPR repeat
       0.47    9.9  25.4       0.23   10.8  10.3    3.0  2  PF04156.9  IncA protein
          1    8.1  18.6       0.14   10.9   5.8    2.4  2  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        1.2    8.1   7.5       0.39    9.7   1.4    2.0  2  PF04582.7  Reovirus sigma C capsid protein
        2.8    6.1  15.9         24    3.1  11.0    1.9  1  PF13166.1  AAA domain
          3    6.9  17.8      0.023   13.8   1.9    2.9  2  PF11932.3  Protein of unknown function (DUF3450)
        5.4    4.3   9.2       0.79    7.0   2.1    2.0  2  PF05478.6  Prominin
        7.4    6.1  15.7       0.13   11.6   3.2    4.0  4  PF02151.14 UvrB/uvrC motif
        7.6    5.2   8.2        0.8    8.4   0.3    2.3  2  PF12805.2  FUSC-like inner membrane protein yccS
        8.1    3.5  24.7       0.32    8.1   3.2    2.1  2  PF12128.3  Protein of unknown function (DUF3584)


Domain annotation for each model (and alignments):
>> PF02465.13  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00024      0.28       4      46 ..     124     166 ..     121     198 .. 0.88
   2 ?    5.2   2.7     0.021        24       5      68 ..     323     392 ..     317     399 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00024
  PF02465.13   4 ldteslvkklmaaerapldrlkqqeqkleaklsaygtlksals 46 
                  d+e++++ l +a++ ++++l qq+++++++l+a+  l  ++s
  MMETSP1325-20131115|8507_1 124 QDYEAIMDRLRTADSVKQAALMQQRNEIQSELEAIDRLSFQVS 166
                 599*******************************999877665 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.021
  PF02465.13   5 dteslvkklmaaerapl.drlkqqe..qkleaklsaygtlksalsdlqsalkalkst..s.afntkkats 68 
                 d+e+l++++ +a+r     rl++++  q+l+  + a+++l+++ ++l +++k+l+ +  + ++++ +++s
  MMETSP1325-20131115|8507_1 323 DYETLLSDFEEAKREVHsLRLEKRQmgQELNDDQAAIMSLTASKRQLEDKVKELEGAlaEaTSDAASTKS 392
                 7888999999999998888898887678999999999999999999999999996642211333333333 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   2.9     0.027        31     180     258 ..      66     145 ..      55     164 .. 0.73
   2 ?   14.5   4.9   8.2e-06    0.0094     184     269 ..     298     382 ..     263     390 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.027
   PF08317.6 180 pklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkle.eleeelqelkkkiealkekkselle 258
                 ++++++ +a ke++++L+++ + +    +e+l+++ + ++++ e+i+++r k+e e +++ +++ + + ++ + k+  l 
  MMETSP1325-20131115|8507_1  66 HSVVALDQAFKERATKLQEQMSLMLGPRREKLAQMASLIRTRAEEIQSERVKVErETTQDYEAIMDRLRTADSVKQAALM 145
                 67888889999999999999999999999999999999999999999888887635666778888888777766654332 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 8.2e-06
   PF08317.6 184 ekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekilee 269
                 ++ ++l +e+++Lrql++  +++ +++ e l ++ ++ + ++++ r +  ++ +el++ +++i +l+ +k +l+++++e+e +l+e
  MMETSP1325-20131115|8507_1 298 ALTDRLSREVNQLRQLSS-HTSVLEQDYETLLSDFEEAKREVHSLRLEKRQMGQELNDDQAAIMSLTASKRQLEDKVKELEGALAE 382
                 57799************9.677778899****************************************************987766 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00036       0.4       7      27 ..     245     265 ..     245     267 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00036
  PF01535.15   7 IsgyckaGkleeAlelfkeMk 27 
                 +++++k++k+e+Ale+ ++M+
  MMETSP1325-20131115|8507_1 245 LDALAKKKKYEKALEVKDRML 265
                 589*****************6 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   1.9     0.039        45      94     163 ..      90     154 ..      52     173 .. 0.41
   2 ?   10.8  10.3   0.00021      0.23      76     171 ..     256     381 ..     184     401 .. 0.72

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.039
   PF04156.9  94 e....eeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr....eeisdlkeevqel 163
                      e+l q+ + + +  +e+++++   e              + +++++++++++r       +++ ++++e+q +
  MMETSP1325-20131115|8507_1  90 LgprrEKLAQMASLIRTRAEEIQSERVKVER-------------ETTQDYEAIMDRLRTADsvkqAALMQQRNEIQSE 154
                 2222233333333333333333322222222.............2333333333333333322222222222222222 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00021
   PF04156.9  76 e..........................srlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr...eeisdlkeevqelrselerl.q 171
                                            ++l++e  e+ + +  l + l+++ ++l  l+s+ + le+d+e l++++++ + +++sl+ +  ++ +e+ + +    ++  +k++++++++ele   +
  MMETSP1325-20131115|8507_1 256 KalevkdrmlweviqghkaleeklgdeTKLCAEYGEEMANWLALTDRLSREVNQLRQLSSHTSVLEQDYETLLSDFEEAKREVHSLRLEKRQMGQELNDDQaaiMSLTASKRQLEDKVKELEGAlA 381
                 2555555555556666666666677778899999999999999********************************************************996664444444444444444433222 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   1.8     0.044        50      68     142 ..      93     140 ..      58     169 .. 0.50
   2 ?   10.9   5.8   0.00013      0.14      21     122 ..     302     400 ..     284     403 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.044
   PF10186.4  68 kkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklnsleslt 142
                 ++e+++q+ + i++  eei+                           ++r ++ ++ +++++  +++l + +s++
  MMETSP1325-20131115|8507_1  93 RREKLAQMASLIRTRAEEIQ---------------------------SERVKVERETTQDYEAIMDRLRTADSVK 140
                 23333333333333333333...........................3333333333333333333333333333 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00013
   PF10186.4  21 rLlelrlrlanlkaeketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrraeqla 122
                 rL +   +l++l +    l++ +e +l+ + +e+k++++ l+le+ +  ++++  ++ i  l++  +q+  +++el+ ala+  sd++   ++ +r+++ql+
  MMETSP1325-20131115|8507_1 302 RLSREVNQLRQLSSHTSVLEQDYETLLS-DFEEAKREVHSLRLEKRQMGQELNDDQAAIMSLTASKRQLEDKVKELEGALAEATSDAA--STKSSRKKKQLQ 400
                 6999999********************8.8888*****************************************************99..444444444444 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.2       0.1   1.2e+02      47     137 ..      71     167 ..      56     197 .. 0.65
   2 ?    9.7   1.4   0.00035      0.39      17     109 ..     297     389 ..     285     402 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.1
   PF04582.7  47 lsesvssisskls.dlsadlqdvtsslddvkaelkelstevaalqssvdslsse.....ladlselvsahdaalsslqtevdanstdisnlksdvsa 137
                 l+++ ++  +kl  ++s  l+   + l+++ + ++   +e+++ +  v+  +++     +  l +  s ++aal + ++e++++  +i  l  +vs 
  MMETSP1325-20131115|8507_1  71 LDQAFKERATKLQeQMSLMLGPRREKLAQMASLIRTRAEEIQSERVKVERETTQdyeaiMDRLRTADSVKQAALMQQRNEIQSELEAIDRLSFQVSG 167
                 5555555555554135555666666666666666555555555554444443322222166677788888888888888888888888888888875 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00035
   PF04582.7  17 lsltssvtinpGdltavyerltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsa 109
                 l+lt   + +   l ++    + le   ++l +  +++  ++  l  + +++ + l+d +a + +l++  ++l++ v++l   la+ ++ + +
  MMETSP1325-20131115|8507_1 297 LALTDRLSREVNQLRQLSSHTSVLEQDYETLLSDFEEAKREVHSLRLEKRQMGQELNDDQAAIMSLTASKRQLEDKVKELEGALAEATSDAAS 389
                 667777777777778888888888888888888888888888888888888888888888888888888888888888888777766543333 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1  11.0     0.021        24     279     469 ..      72     381 ..      66     398 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.021
   PF13166.1 279 deefeelkekleellekleskieklleelesilseekensefked......veelkaelealeeeleklekaleeKlkdpfssle.lesiadeie...........................................................................................................einelvdkinelirkhNekidnlkeeknkakkklwlhlv.....aelkedideyekklkklekkinslekeleklekeikklekeikelekelkneeptaeeinkeLk 469
                 d++f+e   kl+e+++ +    ++ l+++ s+++++ e+ ++++       +++++a ++ l+++  + + al ++++++ s+le ++ ++ +++                                                                                                           +++e++ +  +l+++  e+++n  + ++++  ++++  +     + l++d++++  + ++ ++++ sl  e+ +  +e+++ +++i  l ++ ++ e  ++e+   L+
  MMETSP1325-20131115|8507_1  72 DQAFKERATKLQEQMSLMLGPRREKLAQMASLIRTRAEEIQSERVkveretTQDYEAIMDRLRTADSVKQAALMQQRNEIQSELEaIDRLSFQVSggaasaapqhmtdaflhpgsssvagaavstpsgmlgviqmypelaaaiervaarplplpdlqqdvldptdfprelkkrldalakkkkyekalevkdrmlweviqghkALEEKLGDETKLCAEYGEEMANWLALTDRLSREVNQLRQlsshtSVLEQDYETLLSDFEEAKREVHSLRLEKRQMGQELNDDQAAIMSLTASKRQLEDKVKELEGALA 381
                 5556666666666666666666666667777776654444444443333356666666666777767777889999999999777345555666599999***********************************************************************************************9999999999999999999999999888888888888888888777777766777777777777777777777777777777777777777777777777777777777765554 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   5.1       1.8     2e+03      20      77 ..      54     112 ..      47     166 .. 0.53
   2 ?   13.8   1.9   2.1e-05     0.023      31     107 ..     303     379 ..     285     389 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 1.8
   PF11932.3  20 aaasldqaqeaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenl.kvyndqle 77 
                 + +s+ +a++a+++ +a +++ +++  kl++q+  +l   ++  ++ ++l ++  ++++
  MMETSP1325-20131115|8507_1  54 TVESAAAARAAGHSVVALDQAFKERATKLQEQMSLMLGPRREKLAQMASLiRTRAEEIQ 112
                 44566666777777777777777777777777666655443333333333133333332 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 2.1e-05
   PF11932.3  31 eqkanaaaaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieetrqeivPl 107
                  ++ +++ +q ++  + l++  ++ll+++e++++ev +l++ ++q+ +++++ q+ + sl+ +  ++e+  +e+   
  MMETSP1325-20131115|8507_1 303 LSREVNQLRQLSSHTSVLEQDYETLLSDFEEAKREVHSLRLEKRQMGQELNDDQAAIMSLTASKRQLEDKVKELEGA 379
                 4556677777788889999********************************************99999877777655 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.3     0.051        58     341     401 ..      96     156 ..      62     171 .. 0.67
   2 ?    7.0   2.1   0.00069      0.79     213     325 ..     265     378 ..     225     401 .. 0.72

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.051
   PF05478.6 341 glstleeipskvkeqtssvvqevkkaldslgteiksvaeelpkqvkstlsqllenvqksik 401
                  l ++ ++ ++ +e+++s++ +v ++ ++  ++i + ++++ +  ++ l q+++++q++++
  MMETSP1325-20131115|8507_1  96 KLAQMASLIRTRAEEIQSERVKVERETTQDYEAIMDRLRTADSVKQAALMQQRNEIQSELE 156
                 4455555556666666666666666666666666666666666666666666666666655 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.00069
   PF05478.6 213 skdLdeagenlgkrikdelk..sevlpvLeevvelgqvlkemkeaLesvsktvkelkeegsqlesglssvrrrlnellaklCktqeCakilss.lsilaldadfsqlpdvteilen 325
                   ++ + ++ l +++ de+k  +e  +++++ + l+  l+   ++L+++s+ ++ l++  ++l s +++++r++ +l  +  k q+ ++++++ ++i++l+a+ +ql d  ++le+
  MMETSP1325-20131115|8507_1 265 LWEVIQGHKALEEKLGDETKlcAEYGEEMANWLALTDRLSREVNQLRQLSSHTSVLEQDYETLLSDFEEAKREVHSLRLE--KRQMGQELNDDqAAIMSLTASKRQLEDKVKELEG 378
                 44444555666666655444338888999999999999************************************999999..8889999976415677888999999988877775 PP

>> PF02151.14  UvrB/uvrC motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       1.3   1.5e+03      21      30 ..      77      86 ..      76      88 .. 0.58
   2 ?   11.6   3.2   0.00012      0.13       5      30 ..     239     264 ..     239     265 .. 0.95
   3 ?   -2.8   0.0       3.9   4.4e+03      16      21 ..     320     325 ..     317     326 .. 0.79
   4 ?   -1.4   0.1       1.5   1.7e+03      19      25 ..     330     336 ..     329     336 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.3
  PF02151.14 21 EkAAklRDqi 30
                E+A kl  q+
  MMETSP1325-20131115|8507_1 77 ERATKLQEQM 86
                5666665554 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00012
  PF02151.14   5 keLeeemeeAaeeedFEkAAklRDqi 30 
                 +eL++ +++ a++  +EkA +++D++
  MMETSP1325-20131115|8507_1 239 RELKKRLDALAKKKKYEKALEVKDRM 264
                 69**********************97 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 3.9
  PF02151.14  16 eeedFE 21 
                  e+d+E
  MMETSP1325-20131115|8507_1 320 LEQDYE 325
                 589**9 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 1.5
  PF02151.14  19 dFEkAAk 25 
                 dFE+A +
  MMETSP1325-20131115|8507_1 330 DFEEAKR 336
                 9****75 PP

>> PF12805.2  FUSC-like inner membrane protein yccS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   1.4      0.23   2.6e+02     214     282 ..      96     160 ..      67     162 .. 0.54
   2 ?    8.4   0.3    0.0007       0.8      90     167 ..     264     339 ..     263     391 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.23
   PF12805.2 214 llelqaeaceelaeailrrkpyqhserleraleeleqsleklaqqenpesqellkaLsallrnLrkidr 282
                  l ++a+ +++ ae+i+  + ++  +++++  e++ + l++    ++ ++  l+++ +++   L++idr
  MMETSP1325-20131115|8507_1  96 KLAQMASLIRTRAEEIQ-SERVKVERETTQDYEAIMDRLRT---ADSVKQAALMQQRNEIQSELEAIDR 160
                 34556666666666666.33344444444444444444444...3333445555555556666666655 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.0007
   PF12805.2  90 llwsllfpnrpvqesLaelyeelAdYleaKaslfdpdredddeqlrleLaqqnskvvealnqareillsrlk.skrgqp 167
                 +lw +++ ++ ++e+L +  + +A+Y e  a+ +  ++    e ++l   +q s+ ++ l+q +e+lls ++  kr+ +
  MMETSP1325-20131115|8507_1 264 MLWEVIQGHKALEEKLGDETKLCAEYGEEMANWLALTDRLSREVNQL---RQLSSHTSVLEQDYETLLSDFEeAKREVH 339
                 89********************************6665555555554...777888899999*******9995555433 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   3.2   0.00028      0.32     369     457 ..      73     161 ..      53     180 .. 0.77
   2 ?    1.4   8.4     0.029        33     226     327 ..     291     397 ..     239     403 .. 0.50

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00028
   PF12128.3 369 daltekvqdvqekferrkqkikeqleeeleknkerleaireekerqkaaieealealesqlrkqleaqkeelneeekelesrleelklr 457
                 +a+ e+++++qe++        e+l++  + ++ r+e+i+ e+ ++  +  +++ea+   lr     ++++l ++++e++s+le ++ +
  MMETSP1325-20131115|8507_1  73 QAFKERATKLQEQMSLMLGPRREKLAQMASLIRTRAEEIQSERVKVERETTQDYEAIMDRLRTADSVKQAALMQQRNEIQSELEAIDRL 161
                 57778888888888888888888888888888888888888888888888888888888888888888888888888888887766554 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.029
   PF12128.3 226 edveeWiadi....qalraiekvapeieklqeefeqleslllkLqllhvelkadeerleeeqeevkeakkelkeqlrtledelkeasdelnqelsaa.nakleakes 327
                 e++++W+a      + ++++ +   + ++l++++e+l s  ++++     l+ +++++ +e+++ ++a  +l ++ r+led++ke + +l ++ s+a + k ++k++
  MMETSP1325-20131115|8507_1 291 EEMANWLALTdrlsREVNQLRQLSSHTSVLEQDYETLLSDFEEAKREVHSLRLEKRQMGQELNDDQAAIMSLTASKRQLEDKVKELEGALAEATSDAaSTKSSRKKK 397
                 45555554330011223334444445555555555555555555555555555555555555555555555555555555555555555555544331333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1408  (0.102984); expected 273.4 (0.02)
Passed bias filter:                      519  (0.0379608); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.11u 0.37s 00:00:01.48 Elapsed: 00:00:00.61
# Mc/sec: 1587.10
//
Query:       MMETSP1325-20131115|8508_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.016   15.2   0.0      0.018   15.1   0.0    1.1  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)
      0.043   13.6   0.0      0.049   13.4   0.0    1.1  1  PF13180.1  PDZ domain


Domain annotation for each model (and alignments):
>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   2.6e-06     0.018      26      60 ..      10      44 ..       3      64 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.6e-06
                SEEEEESTTTHHTTTTSBSTTCEEEEETTEBGTTS CS
  PF00595.19 26 gifvsevvpggaaeagglkeGDkIlsvNgvdvenv 60
                 + v++v+pg+  e gg k++D ++  +g++++  
  MMETSP1325-20131115|8508_1 10 QVWVTSVNPGSVGEMGGFKVDDLLVMAGGKPIVAP 44
                5789***************************9864 PP

>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   7.1e-06     0.049      14      57 ..       9      53 ..       2      61 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 7.1e-06
   PF13180.1 14 rgvlvvsVkessPaakaglkpGDiilkvdgkkv.ksltdlkslll 57
                ++v v+sV+++s  +  g+k++D +++ +gk++   ++d++++++
  MMETSP1325-20131115|8508_1  9 GQVWVTSVNPGSVGEMGGFKVDDLLVMAGGKPIvAPGNDVDGAVA 53
                6899****************************9655566666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|8504_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-17   63.0   0.5    4.3e-17   61.9   0.3    1.5  1  PF01958.13 Domain of unknown function DUF108
    1.7e-09   37.9   0.0    3.5e-09   36.9   0.0    1.5  1  PF03447.11 Homoserine dehydrogenase, NAD binding domain
  ------ inclusion threshold ------
      0.045   14.1   0.0        1.7    9.1   0.0    2.3  2  PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold
      0.093   12.9   0.3       0.32   11.1   0.0    2.0  2  PF01118.19 Semialdehyde dehydrogenase, NAD binding domain
       0.13   11.2   0.0       0.23   10.4   0.0    1.3  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF01958.13  Domain of unknown function DUF108
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.3   1.6e-20   4.3e-17       3      91 ..     193     289 ..     191     290 .. 0.94

  Alignments for each domain:
  == domain 1    score: 61.9 bits;  conditional E-value: 1.6e-20
  PF01958.13   3 lteptvlfeGsareaikkfPknvNvaaalalAg...lgfervkvelvadpsldrnvheievsg.....efgelsltvenvpspenpkTsalaalSvv 91 
                 +t ++vl+eG+ r++++++P+nvN++aa+alA+    gf+  + +lv+d++++ +++++ev+g     +  + ++tv+ +p++  ++T+ ++++S++
  MMETSP1325-20131115|8504_1 193 ATGEHVLYEGPIRGLAAHAPNNVNTMAAAALASpsiGGFDGLTARLVMDTETEAHIVTVEVEGpakpgAKPFKQTTVRYNPAEVGAVTGDATYASFL 289
                 57889****************************99889*************************9988777788999*******************97 PP

>> PF03447.11  Homoserine dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   1.3e-12   3.5e-09       1     109 [.      25     132 ..      25     140 .. 0.94

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 1.3e-12
                 -------HHHHHHHH---S.SEEEEEEEEESSEEE-TTHHHHHT--CB---HHHHHHHHS.-EEEEE-S--TTT---HHHHHH---EEE----TGGG-HCHHHCCCSSSTT CS
  PF03447.11   1 GlGaiGsallellkrqqee.iplelvavadrdsllskarkallgdeavtldlddlvadlr.vdvvVEcasseavaelvlkaLeagkhvvtankgAladealyeeLreaaea 109
                 G+Ga+G+ l++++++++     lel++v++  s    a+  l++++ + +dl  + +  + +d++VE+a+++  a + + +Le+  +++ a+  A++d++  +++re+ae+
  MMETSP1325-20131115|8504_1  25 GFGAVGKYLADAVQNDPVAsSALELAFVCEPMSPGAVAASGLFEPAVCLEDLAGFRS--KeADLIVEVAHASVSARYGPAFLEH-ADYMPASITAFVDDTVEKACREVAES 132
                 99***************9999**********97777888899************999..55***********************.**********************9986 PP

>> PF01408.17  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00061       1.7       2      43 ..      20      64 ..      19     124 .. 0.75
   2 ?    3.4   0.0     0.035        96      15      95 ..      99     204 ..      90     225 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00061
                EEEEE----HHHHHHHHHHHCHCSE....EEEEEEGSSHCCHHHHH CS
  PF01408.17  2 rvgivGaGkigsrhlrplnesqrre....elvalvdpdperaeava 43
                rvgivG+G +g+  + ++++  + +    el+ +++p ++ a a++
  MMETSP1325-20131115|8504_1 20 RVGIVGFGAVGKYLADAVQND-PVAssalELAFVCEPMSPGAVAAS 64
                89**************99998.544577799999999888776654 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.035
                 HHHHHHHCHCSE..EEEEEEGSSHCCHHHH.HHHCTHH.....CCSS........HHHHHHSTT-SEEEE-S-G.........GGHHHHHHHHHHTT-...EEEEESSS CS
  PF01408.17  15 hlrplnesqrre..elvalvdpdperaeav.aesfgve.....aysd........leelledpkidavivatpn.........gthadlalaaleagk...hvllEKPl 95 
                 +++++ e+ +     ++a+vd   e+a +  aes   e        +        ++++ e+   +av+v++ +           ++++++ ++  g    hvl E P+
  MMETSP1325-20131115|8504_1  99 YGPAFLEHADYMpaSITAFVDDTVEKACREvAESPAQEhglyiP--SgalwgardIQKMDERGSLRAVTVTMCKaphhlkisgPVGEKMERLLAS-GAtgeHVLYEGPI 204
                 56666666444466777777777665543323333333333230..2444444448888888888888888766666555543114444443333.3335599999998 PP

>> PF01118.19  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00012      0.32       1      89 [.      20     106 ..      20     112 .. 0.79
   2 ?   -2.1   0.0       1.5   4.1e+03       8      21 ..     178     191 ..     177     200 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00012
                 EEEEB--------HHHHHHHC....TSSEEEEEEEETTTT---BHHHHSGGGCCCCCEBEEEGCGCCCTC-SEEEE---HHHHHHHHHCHHHT CS
  PF01118.19   1 kvaivGatGyvGqellrlLee....hpelelvalvassrsaGkklaeahkaleegkdlvledadeeelkevdivflalpagvskelapkllea 89 
                 +v+ivG  G+vG+ l    ++    +  lel++ v+++ s G   a+          + led +    ke+d+++  + a+vs+ + p++le+
  MMETSP1325-20131115|8504_1  20 RVGIVG-FGAVGKYLADAVQNdpvaSSALELAF-VCEPMSPGAVAASGLF----EPAVCLEDLAGFRSKEADLIVEVAHASVSARYGPAFLEH 106
                 7*****.**************443333344444.4445558887777755....68899999888888********************99986 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.5
                 ------HHHHHHHC CS
  PF01118.19   8 tGyvGqellrlLee 21 
                 +G vG+++ rlL++
  MMETSP1325-20131115|8504_1 178 SGPVGEKMERLLAS 191
                 68899999998886 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   8.3e-05      0.23      34      56 ..      16      38 ..       6      42 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 8.3e-05
                GGGSEEE-B-------HHHHHHH CS
  PF02826.14 34 lsgktvGiiGlGrIGqavakrlk 56
                 ++++vGi+G+G++G+ +a+ ++
  MMETSP1325-20131115|8504_1 16 RARRRVGIVGFGAVGKYLADAVQ 38
                56899***********9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 1461.78
//
Query:       MMETSP1325-20131115|8509_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 755.37
//
Query:       MMETSP1325-20131115|8512_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.46
# Mc/sec: 322.99
//
Query:       MMETSP1325-20131115|8514_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 747.10
//
Query:       MMETSP1325-20131115|8516_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 377.20
//
Query:       MMETSP1325-20131115|8517_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.73    8.5   3.6       0.97    8.1   2.5    1.1  1  PF01425.16 Amidase


Domain annotation for each model (and alignments):
>> PF01425.16  Amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.5   7.1e-05      0.97     114     138 ..      49      73 ..      39      75 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 7.1e-05
  PF01425.16 114 afgptrNPwnksrtpGGSSGGsAAa 138
                  +  +  P+ ++r +GGS +GsAA+
  MMETSP1325-20131115|8517_1  49 PTHSVTPPLTPTRRSGGSASGSAAS 73 
                 5667788****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 483.63
//
Query:       MMETSP1325-20131115|8511_1  [L=399]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-12   46.5   0.0    4.4e-12   45.6   0.0    1.4  1  PF01852.14 START domain
  ------ inclusion threshold ------
        1.4    7.2   6.0          1    7.6   0.0    2.1  2  PF11853.3  Protein of unknown function (DUF3373)


Domain annotation for each model (and alignments):
>> PF01852.14  START domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.0   6.4e-16   4.4e-12      89     188 ..      77     181 ..       4     191 .. 0.78

  Alignments for each domain:
  == domain 1    score: 45.6 bits;  conditional E-value: 6.4e-16
                 EEEEEEEE----------EEEEEEEEEEE.----EEE---B-......-------..----EE-B----EEEEEE----TEEEEEEE--B------HHHHHHHHHHH CS
  PF01852.14  89 galqlmvaelqalsplvpRdfvfvRyirqlgagdwvivdvSv......dseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksg 188
                 +   + + + ++  p+ +Rdf+  + + +  +g +v  ++S+      ++  + p  s ++ R++l++ g +++p+++g+++vt++  +dl g+lp+++++ +v + 
  MMETSP1325-20131115|8511_1  77 TYFDHLTYKGVW--PVQARDFTLMARWARTADGAYVAGSQSIgdgpgtEQLLDAPLpSRKYTRGRLFMGGWCLRPLEEGGCRVTYMVEMDLCGSLPSSIVNAVVTQQ 181
                 55567777899*..***************9***********7333333555666668*********************************************99876 PP

>> PF11853.3  Protein of unknown function (DUF3373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0   0.00015         1     407     440 ..      24      59 ..      19      64 .. 0.81
   2 ?   -0.3   2.5      0.04   2.7e+02      10      60 ..     334     385 ..     326     391 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00015
   PF11853.3 407 eDdmigskvatRGdvyEaYliqel..fksklflklg 440
                 + +++gs+va+RG+++  Y   ++  f s ++ ++ 
  MMETSP1325-20131115|8511_1  24 TKTPMGSRVAARGEAVLPYSAEQIvwFLSDTTTQIE 59 
                 5699******************99886666666665 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.04
   PF11853.3  10 vaallalslaaaaaaadidklq.kiekLkkeleelkeqlkdlkkkvekiekk 60 
                 +aa +a +  +a+ +a +d+l+ ++++  +++ e+ +++k+l++ ++++e+ 
  MMETSP1325-20131115|8511_1 334 AAAAAAHASELAEFQASADALRhELAAAAAQQVEQDAEMKELEEALRRAERT 385
                 2333555555556666666666677777777777777777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1096  (0.0801638); expected 273.4 (0.02)
Passed bias filter:                      624  (0.0456407); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.61
# Mc/sec: 1567.45
//
Query:       MMETSP1325-20131115|8520_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|8521_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 953.44
//
Query:       MMETSP1325-20131115|8524_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.011   15.4  13.3      0.014   15.0   9.2    1.2  1  PF08595.6  RXT2-like, N-terminal
       0.18   10.2   6.8       0.21   10.0   4.7    1.0  1  PF00945.13 Rhabdovirus nucleocapsid protein
        0.2    9.9  23.3        0.2    9.9  16.2    1.0  1  PF03344.10 Daxx Family
       0.63    8.9   6.5       0.66    8.9   4.5    1.0  1  PF00296.15 Luciferase-like monooxygenase
        1.1    8.2  25.6        1.3    8.1  17.7    1.1  1  PF06524.7  NOA36 protein
        2.1    8.3  13.1        2.2    8.2   9.1    1.2  1  PF09805.4  Nucleolar protein 12 (25kDa)
        2.1    8.4  13.7        3.1    7.9   9.5    1.2  1  PF14000.1  DNA packaging protein FI
        2.1    6.1  21.3        2.1    6.1  14.8    1.0  1  PF02724.9  CDC45-like protein
        2.8    7.8   9.8        2.9    7.8   6.8    1.1  1  PF08432.5  Fungal protein of unknown function (DUF1742)
        3.9    7.9  29.5        5.1    7.6  20.5    1.3  1  PF09538.5  Protein of unknown function (FYDLN_acid)
        4.6    6.4  16.6        4.7    6.4  11.5    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
        7.4    5.4  26.0        7.4    5.4  18.0    1.1  1  PF06213.7  Cobalamin biosynthesis protein CobT
        8.8    4.4  16.1        9.4    4.3  11.2    1.0  1  PF07093.6  SGT1 protein


Domain annotation for each model (and alignments):
>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   9.2   1.4e-05     0.014      11      88 ..       8      80 ..       2      87 .. 0.69

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.4e-05
   PF08595.6 11 kaelvkegklaasskslkekvveYnGserkvlsrkrkkkkkepridedenelddededdeeeededeeeaeenplkki 88
                +a  +++g+  +++ +     v Y + + +v +       + +  d+de+++dd+d+dd++ee++d+++++en ++k+
  MMETSP1325-20131115|8524_1  8 RAACMTRGRT-NDGAEEGAGLVSYVNXTDEVAE---AE-AEADDNDDDEGDDDDDDDDDDDEEEDDDDDDDENVHDKM 80
                5555666666.7777777788999999999999...22.345566666666666666777777777777888988775 PP

>> PF00945.13  Rhabdovirus nucleocapsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.7    0.0002      0.21     303     374 ..       5      76 ..       3      89 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0002
  PF00945.13 303 ersknArvieeiaiqeltvaalllsyavsskadlekrfvekekketeekeeeeakeekeeaedGvdsddeap 374
                 er++ A +         +  a+l+sy+   +  +e +   +++ + e ++++ + ++ +e+ed +d+dde++
  MMETSP1325-20131115|8524_1   5 ERARAACMTRGRTNDGAEEGAGLVSYVNXTDEVAEAEAEADDNDDDEGDDDDDDDDDDDEEEDDDDDDDENV 76 
                 799999999999999999999*****9999887777766666666665555555555555555445555544 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9  16.2   0.00019       0.2     434     493 ..      27      87 ..       2      90 .] 0.43

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00019
  PF03344.10 434 lasqeseeeekaekeedeeddekee.edkseeeeeeeeeeeeeeeadneeeedleassege 493
                 l s    ++e ae e++ +d++++e +d+++++++++eee+++++ d+++ + ++ ++++e
  MMETSP1325-20131115|8524_1  27 LVSYVNXTDEVAEAEAEADDNDDDEgDDDDDDDDDDDEEEDDDDDDDENVHDKMDDANDDE 87 
                 2222233333333333333332222033444445555566666666666777777666655 PP

>> PF00296.15  Luciferase-like monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.5   0.00063      0.66     204     270 ..       4      78 ..       2      90 .] 0.64

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00063
                 HHHHHH....HHHCCS-S----EEE----SSHHHHHHHHHHHC...........S----------------HHHH CS
  PF00296.15 204 iervraaaaaagrdpadvrvvaslpvivadteeeAraealali........deegagreaaaaarqeeeapelwa 270
                  er raa+  +gr  +  + +a+l  +v+ t+e A+aea+a          d+   +++++ + ++++ + + ++
  MMETSP1325-20131115|8524_1   4 RERARAACMTRGRTNDGAEEGAGLVSYVNXTDEVAEAEAEADDndddegddDDDDDDDDDEEEDDDDDDDENVHD 78 
                 57899**********************************333224333343222222222233333444444444 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  17.7    0.0012       1.3     237     309 ..      12      83 ..       2      89 .. 0.43

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0012
   PF06524.7 237 qtrgeesddeegygaykk.nlssdkygdaksvnygyesdddeeesaedydeeededddddeeedetsenegeke 309
                  trg  +d++e+  +       +d+ ++a++   ++++ddde+++++d+d+++de++ddd+++de+ +++ ++ 
  MMETSP1325-20131115|8524_1  12 MTRGRTNDGAEEGAGLVSyVNXTDEVAEAEA--EADDNDDDEGDDDDDDDDDDDEEEDDDDDDDENVHDKMDDA 83 
                 4566666655443333220233455555422..33333444444444444444444444444444444443333 PP

>> PF09805.4  Nucleolar protein 12 (25kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   9.1    0.0021       2.2      77     117 ..      38      81 ..       4      90 .] 0.46

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0021
   PF09805.4  77 keleeeeddeeeeeeekeeeeeedewegfn...edeeeeeteee 117
                  e+e+e dd++++e ++++++++d+ e  +   +d+e+++++ +
  MMETSP1325-20131115|8524_1  38 AEAEAEADDNDDDEGDDDDDDDDDDDEEEDdddDDDENVHDKMD 81 
                 22222222222222222222222211222211122222222222 PP

>> PF14000.1  DNA packaging protein FI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   9.5    0.0029       3.1      31      73 ..      35      82 ..      29      89 .. 0.54

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0029
   PF14000.1 31 qrvaElEeEld........qvaeedtassdekaltssedeavseqgevvtq 73
                  vaE+E E+d        + +++d+++ +e+++++++de+v+++ +   +
  MMETSP1325-20131115|8524_1 35 DEVAEAEAEADdndddegdDDDDDDDDDDEEEDDDDDDDENVHDKMD---D 82
                579********765554433333333333333444444444444443...3 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  14.8     0.002       2.1     119     173 ..      36      84 ..       7      90 .] 0.38

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.002
   PF02724.9 119 dayealvemkeeeeeesdedsdseddeeeeessasekrksesdedeeddddeede 173
                 + +ea  e ++++++e d+d+d++dd++eee ++++      d+++ +d++++ +
  MMETSP1325-20131115|8524_1  36 EVAEAEAEADDNDDDEGDDDDDDDDDDDEEEDDDDD------DDENVHDKMDDAN 84 
                 222222222222222222222222222222222221......1111122222211 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   6.8    0.0027       2.9      79     127 ..      38      78 ..      13      90 .] 0.41

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0027
   PF08432.5  79 eekqkakkekkkkkkekdkekekkkdkkddksekekekeeeekaeelkk 127
                 +e++  + ++++++ ++d+++++++d+        +e+++++++e+++ 
  MMETSP1325-20131115|8524_1  38 AEAEAEADDNDDDEGDDDDDDDDDDDE--------EEDDDDDDDENVHD 78 
                 222222222222222222212222121........11111222221111 PP

>> PF09538.5  Protein of unknown function (FYDLN_acid)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  20.5    0.0048       5.1      61     108 .]      35      82 ..       3      88 .. 0.44

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0048
   PF09538.5  61 eeeeeeeddvledddeeedldddledeadddvdldeddDdvleddddd 108
                 +e +e+e++++++dd+e d+ddd++d++d+++d d+ddD++++d  dd
  MMETSP1325-20131115|8524_1  35 DEVAEAEAEADDNDDDEGDDDDDDDDDDDEEEDDDDDDDENVHDKMDD 82 
                 222222222222222222223333333333334444555555554444 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  11.5    0.0045       4.7      58     104 ..      38      82 ..      12      90 .] 0.37

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0045
   PF07423.6  58 ekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkee 104
                  ++e+e  +++++e  +d+d++dd+++e++d++ ++e+ ++  k ++
  MMETSP1325-20131115|8524_1  38 AEAEAEADDNDDDEGDDDDDDDDDDDEEEDDDDDDDENVHD--KMDD 82 
                 11222222222222222222222222222222222222111..1111 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  18.0     0.007       7.4     206     260 ..      31      87 ..       9      90 .] 0.55

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.007
   PF06213.7 206 lelaeelgdeeessdseekrdedddkedeeddaseeeesgdsd.slskd..edassee 260
                 ++ ++e++++e ++d++++ de dd++d++dd+ eee+++d+d ++ +d  +da+++e
  MMETSP1325-20131115|8524_1  31 VNXTDEVAEAEAEADDNDD-DEGDDDDDDDDDDDEEEDDDDDDdENVHDkmDDANDDE 87 
                 5566777777777777776.33333333333333333333333143344333443333 PP

>> PF07093.6  SGT1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  11.2    0.0089       9.4     492     535 ..      44      83 ..      14      88 .. 0.52

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0089
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07093.6 492 lddrqsdskdkddeeddeededessssaeeleeleeymaamdee 535
                 +dd+++d+ d+dd++dd++de+    ++ ++++ e+++++md++
  MMETSP1325-20131115|8524_1  44 ADDNDDDEGDDDDDDDDDDDEE----EDDDDDDDENVHDKMDDA 83 
                 1111122222222222222222....233677777777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       640  (0.046811); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                       118  (0.00863078); expected 13.7 (0.001)
Passed Fwd filter:                        58  (0.00424225); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 422.89
//
Query:       MMETSP1325-20131115|8525_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 604.30
//
Query:       MMETSP1325-20131115|8523_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   13.9   0.0      0.034   13.2   0.0    1.3  1  PF00206.15 Lyase
      0.045   13.5   1.8       0.59    9.8   0.0    2.2  2  PF06679.7  Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> PF00206.15  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     5e-06     0.034     219     285 ..     122     188 ..     115     190 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5e-06
                 HHHHHHHHCS-.EE-S-HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTSEEEEGGG-B CS
  PF00206.15 219 akelakitglp.vkaansfeavsdrDavvellgalkllavsLskiaeDlrllssgpaglvelslaese 285
                 + +l+ ++gl+  +a+n ++a ++ D+ + +  +  l+ v L  i++D+++l++  +   e+ +++++
  MMETSP1325-20131115|8523_1 122 CFRLS-VNGLGvWVAMNGVRACQTLDHQAVVKYVWGLVVVGLLYISNDVWMLITVATATPEEPTPAET 188
                 56788.99***999***************************************988888888888766 PP

>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.3     0.011        74      46      83 ..      24      60 ..       4     101 .. 0.64
   2 ?    9.8   0.0   8.6e-05      0.59      18      80 ..     160     226 ..     146     238 .. 0.70

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.011
   PF06679.7 46 lsalpPgptpanptalleadakkGkasetssggalavs 83
                 sal+Pg++ +np   ++a+a    +++t++  a+av 
  MMETSP1325-20131115|8523_1 24 ASALTPGAAVTNPLHGEVATA-APAGGQTAAATAVAVD 60
                577888888888887655433.4455556666666553 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 8.6e-05
   PF06679.7  18 lllalLaaeaallseaesaassePeprtlsalpPgptpa......nptalleadakkGkasetssggal 80 
                 + l  +++++ +l ++++a++ eP+p +++  +P+++p        p +  e+ a +   + t s +al
  MMETSP1325-20131115|8523_1 160 VGLLYISNDVWMLITVATATPEEPTPAETP--TPTASPDddgdviDPNQPDETFADDAASGYTPSHDAL 226
                 3344478889999999999999***99998..8888877667777555555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 1203.17
//
Query:       MMETSP1325-20131115|8526_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.1   0.9       0.57    9.6   0.0    2.4  2  PF07641.6 Protein of unknown function (DUF1596)


Domain annotation for each model (and alignments):
>> PF07641.6  Protein of unknown function (DUF1596)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1    0.0063        86      16      27 ..     115     126 ..     103     137 .. 0.68
   2 ?    9.6   0.0   4.2e-05      0.57       6      58 ..     159     211 ..     155     221 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.0063
   PF07641.6  16 qPsrpyqGPter 27 
                   ++ yqGPt  
  MMETSP1325-20131115|8526_1 115 HATQQYQGPTAA 126
                 45679****964 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 4.2e-05
   PF07641.6   6 errssgskptqPsrpyqGPtersyGsstsPtkGnfiLPeLhCvPvrPtaainf 58 
                  + s++s +t+ s + +G  +rs G +   + G     ++h +  rP +ain 
  MMETSP1325-20131115|8526_1 159 DKPSGASESTRASTSGKGARGRSGGGGGGGAGGGTGGSNIHEMLRRPDSAINN 211
                 5778999***********************999999999**9999**999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.33s 00:00:00.85 Elapsed: 00:00:00.77
# Mc/sec: 806.05
//
Query:       MMETSP1325-20131115|8528_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 678.97
//
Query:       MMETSP1325-20131115|8529_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-05   21.8   0.0    9.2e-05   21.5   0.0    1.2  1  PF00240.18 Ubiquitin family


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   6.7e-09   9.2e-05      37      67 ..      27      57 ..      19      59 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 6.7e-09
                EEEE---BETTTSBTTTTTT-TTEEEEEEES CS
  PF00240.18 37 rLiysGkvLeDdrtlseyniqdgstlhlvlr 67
                 L+y Gk L ++r +++y+iq+gstl+  +r
  MMETSP1325-20131115|8529_1 27 TLVYGGKHLVEGRAIKHYHIQSGSTLFALIR 57
                69************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|8533_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   12.8   0.4       0.11   12.7   0.3    1.1  1  PF13882.1  C-terminal domain of Fibronectin type III
       0.36    8.8  12.8       0.35    8.9   8.8    1.0  1  PF09770.4  Topoisomerase II-associated protein PAT1
       0.46    9.6  11.9        0.5    9.5   8.3    1.0  1  PF04652.11 Vta1 like
       0.49    9.0   4.9       0.53    8.9   3.4    1.0  1  PF04684.8  BAF1 / ABF1 chromatin reorganising factor
       0.56   10.5   3.7       0.78   10.0   2.6    1.3  1  PF04834.7  Early E3 14.5 kDa protein
        7.2    5.3  11.7        7.7    5.2   8.1    1.1  1  PF13388.1  Protein of unknown function (DUF4106)


Domain annotation for each model (and alignments):
>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3     5e-05      0.11      52     107 ..      20      71 ..       3      79 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5e-05
   PF13882.1  52 pkkdeefeeysreedekelkresqssedeekkkesseDsldeygdgdeskfneDgS 107
                 p+++ + ++ ++++++ + +  +q++    +++++++ s+  y+++ +  +n Dg 
  MMETSP1325-20131115|8533_1  20 PNQPSQAPMTQQQQQPVPPP--AQQQLL--QQQQQQQSSIISYAEHTNRDVNSDGG 71 
                 33334444444444444443..344444..345566779999************96 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   8.8   0.00016      0.35     221     259 ..      16      54 ..       3      81 .. 0.46

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00016
   PF09770.4 221 qqapsqapaqaplpaqlpqqlqnlqqqqlpqlsqqmppq 259
                 ++ap+++p+qap+ +q++q++++ +qqql q++qq++++
  MMETSP1325-20131115|8533_1  16 PPAPPNQPSQAPMTQQQQQPVPPPAQQQLLQQQQQQQSS 54 
                 333333444443322222222222223332222222222 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   8.3   0.00022       0.5     288     346 ..       8      65 ..       2      80 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00022
                 ...........................XXXXXXXXXXXHHHHHH..........HHHHHH CS
  PF04652.11 288 ssppsteapssppvqapsapakpslssakPtaqsassaqaqplqsvapqi.aageitldd 346
                 + p + + p++pp q ++ap+++++++++P +++++  q+   q+++++i + +e+t++d
  MMETSP1325-20131115|8533_1   8 TGPAESFSPPAPPNQPSQAPMTQQQQQPVPPPAQQQLLQQ--QQQQQSSIiSYAEHTNRD 65 
                 4477888889999999999999955555555555444444..344344444445555554 PP

>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.4   0.00023      0.53     292     341 ..      30      80 ..      18      90 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00023
   PF04684.8 292 qvqlqhqhqhq......qqrdvqhqhqqqsqd.qhqeqhqshvdsdnnvyqdrigsi 341
                 q      +q+q      qq+  q+q+qqqs    + e  ++ v+sd  +y+++i+s 
  MMETSP1325-20131115|8533_1  30 Q------QQQQpvpppaQQQLLQQQQQQQSSIiSYAEHTNRDVNSDGGIYKEKIESS 80 
                 2......22224444435555565555555555777888899************985 PP

>> PF04834.7  Early E3 14.5 kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   2.6   0.00034      0.78      60      96 ..      20      65 ..       5      66 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00034
   PF04834.7 60 peepeleaiplqq..plpqP.......epqprapsaisYFnltgeD 96
                p++p+++ +  qq  p+p+P       + q+++ s+isY + t  D
  MMETSP1325-20131115|8533_1 20 PNQPSQAPMTQQQqqPVPPPaqqqllqQQQQQQSSIISYAEHTNRD 65
                555664444333323666679****998999999*****9998877 PP

>> PF13388.1  Protein of unknown function (DUF4106)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   8.1    0.0034       7.7     214     251 ..      21      54 ..       4      79 .. 0.59

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0034
   PF13388.1 214 qqptvqnpaqqvqqpaqqptvqpaqqptvqnpaqqqpq 251
                 +qp+ q p   + q  qqp + paqq+  q+ +qqq+ 
  MMETSP1325-20131115|8533_1  21 NQPS-QAP---MTQQQQQPVPPPAQQQLLQQQQQQQSS 54 
                 2222.222...344567788888888888766655543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       908  (0.0664131); expected 273.4 (0.02)
Passed bias filter:                      554  (0.0405208); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|8534_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-32  111.2  19.1    1.8e-12   46.7   0.6    3.2  4  PF13855.1  Leucine rich repeat
    5.8e-16   57.6   4.1    1.4e-06   27.6   0.4    4.2  4  PF12799.2  Leucine Rich repeats (2 copies)
      2e-14   51.2   9.0      0.073   13.0   0.1    6.1  6  PF00560.28 Leucine Rich Repeat
    2.8e-07   29.5   9.3        7.1    7.2   0.1    6.1  6  PF13504.1  Leucine rich repeat
    0.00023   21.2   3.0    0.00071   19.6   2.1    1.9  1  PF00066.12 LNR domain
    0.00079   19.1   6.8        8.7    6.6   0.0    5.4  6  PF13516.1  Leucine Rich repeat
     0.0011   18.5   0.0     0.0015   18.1   0.0    1.2  1  PF13306.1  Leucine rich repeats (6 copies)


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.6     3e-12   5.8e-09       6      61 .]       3      57 ..       1      57 [. 0.92
   2 !   46.7   0.6   9.1e-16   1.8e-12       5      61 .]      26      81 ..      24      81 .. 0.96
   3 !   46.6   1.2   9.7e-16   1.9e-12       2      61 .]      46     105 ..      45     105 .. 0.94
   4 !   12.2   0.0   5.3e-05       0.1       3      38 ..      95     128 ..      93     135 .. 0.91

  Alignments for each domain:
  == domain 1    score: 35.4 bits;  conditional E-value: 3e-12
   PF13855.1  6 LdLsnNrlkvipdgaFkglsnLkvLdLs.gnnlksispeafkgLpsLreLnLsgNrl 61
                + ++nNrl+++p g F+gl+ L +L+   +  l+++++  f++L+sLr L+L+++++
  MMETSP1325-20131115|8534_1  3 IRVDNNRLTSLPSGLFSGLHTLFSLYMAdNPGLTELPS--FEDLRSLRVLDLRHTNI 57
                6789************************666779**95..**************997 PP

  == domain 2    score: 46.7 bits;  conditional E-value: 9.1e-16
   PF13855.1  5 eLdLsnN.rlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                +L+  +N  l+++p  +F++l +L+vLdL ++n+ +i +++f+gL +L+ L+L+g+++
  MMETSP1325-20131115|8534_1 26 SLYMADNpGLTELP--SFEDLRSLRVLDLRHTNIRNITSGTFNGLDHLTALDLKGCNI 81
                689999999*****..9***************************************98 PP

  == domain 3    score: 46.6 bits;  conditional E-value: 9.7e-16
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnl.ksispeafkgLpsLreLnLsgNrl 61 
                 +L++LdL+++++++i  g+F+gl++L+ LdL+g+n+ + i +++f++ + Lr L+L +N++
  MMETSP1325-20131115|8534_1  46 SLRVLDLRHTNIRNITSGTFNGLDHLTALDLKGCNIsNLIRAGTFAN-KDLRFLSLAYNHI 105
                 8********99*************************557799****9.7**********98 PP

  == domain 4    score: 12.2 bits;  conditional E-value: 5.3e-05
   PF13855.1   3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlk 38 
                 L+ L L  N++   + gaF+  ++L+++ L+gnnl+
  MMETSP1325-20131115|8534_1  95 LRFLSLAYNHIWMAEAGAFG--KSLEHIWLTGNNLT 128
                 899*****************..69***********7 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   1.2e-05     0.023       9      42 ..       6      41 ..       2      43 .. 0.87
   2 !   27.6   0.4   7.1e-10   1.4e-06       2      39 ..      46      84 ..      45      92 .. 0.92
   3 !   13.1   0.1   2.5e-05     0.048       3      37 ..      71     106 ..      71     112 .. 0.83
   4 !    8.3   0.0   0.00082       1.6      25      37 ..     116     128 ..     114     139 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.2e-05
   PF12799.2  9 snNnIkdlppe.lanLpnLktLnLsnNp.isdlsaL 42
                 nN++++lp   +++L  L +L+++ Np +++l+++
  MMETSP1325-20131115|8534_1  6 DNNRLTSLPSGlFSGLHTLFSLYMADNPgLTELPSF 41
                69*******96369*************889999877 PP

  == domain 2    score: 27.6 bits;  conditional E-value: 7.1e-10
   PF12799.2  2 nLevLdLsnNnIkdlpp.elanLpnLktLnLsnNpisdl 39
                +L+vLdL+++nI ++   ++ +L  L+ L+L +++is+l
  MMETSP1325-20131115|8534_1 46 SLRVLDLRHTNIRNITSgTFNGLDHLTALDLKGCNISNL 84
                7**************8758******************97 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 2.5e-05
   PF12799.2   3 LevLdLsnNnIkdlppelanLpn..LktLnLsnNpis 37 
                 L+ LdL ++nI++l    + + n  L+ L+L++N+i+
  MMETSP1325-20131115|8534_1  71 LTALDLKGCNISNLIR-AGTFANkdLRFLSLAYNHIW 106
                 778**********988.77664333**********97 PP

  == domain 4    score: 8.3 bits;  conditional E-value: 0.00082
   PF12799.2  25 nLktLnLsnNpis 37 
                 +L++++L++N+++
  MMETSP1325-20131115|8534_1 116 SLEHIWLTGNNLT 128
                 5666666666665 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.1   0.00039      0.76       5      22 .]       3      21 ..       1      21 [. 0.89
   2 !    7.0   0.0    0.0035       6.7       2      22 .]      24      44 ..      23      44 .. 0.88
   3 !   13.0   0.1   3.7e-05     0.073       1      22 []      46      68 ..      46      68 .. 0.92
   4 !    9.5   0.0   0.00052         1       1      19 [.      70      90 ..      70      92 .. 0.77
   5 ?    2.0   0.0      0.16     3e+02       2      12 ..      95     105 ..      94     105 .. 0.91
   6 !   10.8   0.0   0.00019      0.37       1      15 [.     116     139 ..     116     145 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00039
                EEETSSBCBCHHHH.HHHH CS
  PF00560.28  5 LdLsgNnltslpps.lsnL 22
                + +++N+ltslp++ +s+L
  MMETSP1325-20131115|8534_1  3 IRVDNNRLTSLPSGlFSGL 21
                6789**********99987 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0035
                ESEEEETSS.BCBCHHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nltslppslsnL 22
                L +L++ +N  lt+lp+ ++ L
  MMETSP1325-20131115|8534_1 24 LFSLYMADNpGLTELPS-FEDL 44
                568**************.9876 PP

  == domain 3    score: 13.0 bits;  conditional E-value: 3.7e-05
                TESEEEETSSBCBCHHHH.HHHH CS
  PF00560.28  1 nLeeLdLsgNnltslpps.lsnL 22
                +L++LdL+++n+ ++ ++ + +L
  MMETSP1325-20131115|8534_1 46 SLRVLDLRHTNIRNITSGtFNGL 68
                79**************9999876 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.00052
                TESEEEETSSBCBC.HHHH.H CS
  PF00560.28  1 nLeeLdLsgNnlts.lpps.l 19
                +L+ LdL g+n+++ +  + +
  MMETSP1325-20131115|8534_1 70 HLTALDLKGCNISNlIRAGtF 90
                6999*********63665555 PP

  == domain 5    score: 2.0 bits;  conditional E-value: 0.16
                 ESEEEETSSBC CS
  PF00560.28   2 LeeLdLsgNnl 12 
                 L+ L+L +N++
  MMETSP1325-20131115|8534_1  95 LRFLSLAYNHI 105
                 99*******87 PP

  == domain 6    score: 10.8 bits;  conditional E-value: 0.00019
                 TESEEEETSSBCBC.........H CS
  PF00560.28   1 nLeeLdLsgNnlts.........l 15 
                 +Le++ L gNnlt+         l
  MMETSP1325-20131115|8534_1 116 SLEHIWLTGNNLTCsviegvdgaL 139
                 79***********54655555555 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.012        24       7      17 .]       4      14 ..       2      14 .. 0.88
   2 ?    5.0   0.0     0.018        36       3      17 .]      24      39 ..      22      39 .. 0.87
   3 !    6.8   0.1    0.0048       9.5       2      14 ..      46      58 ..      45      64 .. 0.81
   4 !    7.2   0.1    0.0036       7.1       2      16 ..      70      84 ..      69      85 .. 0.89
   5 ?    4.8   0.0     0.022        42       3      13 ..      95     105 ..      93     107 .. 0.90
   6 ?    0.2   0.0      0.74   1.5e+03       2      15 ..     116     129 ..     115     133 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.012
   PF13504.1  7 dLsgnrLtsLP 17
                ++ +nrLtsLP
  MMETSP1325-20131115|8534_1  4 RVDNNRLTSLP 14
                5789******9 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.018
   PF13504.1  3 LkeLdLsgnr.LtsLP 17
                L  L+ ++n+ Lt+LP
  MMETSP1325-20131115|8534_1 24 LFSLYMADNPgLTELP 39
                66899****99****9 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0048
   PF13504.1  2 nLkeLdLsgnrLt 14
                +L++LdL+++++ 
  MMETSP1325-20131115|8534_1 46 SLRVLDLRHTNIR 58
                8********8865 PP

  == domain 4    score: 7.2 bits;  conditional E-value: 0.0036
   PF13504.1  2 nLkeLdLsgnrLtsL 16
                +L+ LdL g+++  L
  MMETSP1325-20131115|8534_1 70 HLTALDLKGCNISNL 84
                89********99876 PP

  == domain 5    score: 4.8 bits;  conditional E-value: 0.022
   PF13504.1   3 LkeLdLsgnrL 13 
                 L++L+L++n++
  MMETSP1325-20131115|8534_1  95 LRFLSLAYNHI 105
                 9********85 PP

  == domain 6    score: 0.2 bits;  conditional E-value: 0.74
   PF13504.1   2 nLkeLdLsgnrLts 15 
                 +L+   L gn+Lt+
  MMETSP1325-20131115|8534_1 116 SLEHIWLTGNNLTC 129
                 67777899999985 PP

>> PF00066.12  LNR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   2.1   3.6e-07   0.00071       3      36 ..     148     184 ..     145     184 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 3.6e-07
                 -----CHHHHHHTTT-------....--SCCCTT---T CS
  PF00066.12   3 sknCpkakgCekkfgdgvCDee....CnnaeCqfDGgD 36 
                 +++C+ a+g  ++ gdg+CDe      n+a+C++DGgD
  MMETSP1325-20131115|8534_1 148 EGECS-ARGGVSWIGDGFCDEPfdsrYNTAGCLWDGGD 184
                 56788.67778899*****99777779**********9 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       4.9   9.6e+03       1       6 [.       7      12 ..       4      14 .. 0.56
   2 ?   -0.7   0.0         1     2e+03       2      13 ..      22      33 ..      21      40 .. 0.74
   3 !    6.6   0.0    0.0044       8.7       1      16 [.      44      59 ..      44      65 .. 0.86
   4 !    5.6   0.1    0.0096        19       3      16 ..      70      83 ..      68      89 .. 0.89
   5 ?    2.5   0.0     0.097   1.9e+02       1      14 [.      92     105 ..      92     109 .. 0.89
   6 ?    3.0   0.0     0.064   1.3e+02       2      16 ..     115     129 ..     114     139 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 4.9
   PF13516.1  1 lknLts 6 
                ++ Lts
  MMETSP1325-20131115|8534_1  7 NNRLTS 12
                334554 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1
   PF13516.1  2 knLtsLdLsnNq 13
                 +L sL + +N+
  MMETSP1325-20131115|8534_1 22 HTLFSLYMADNP 33
                578899999997 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0044
   PF13516.1  1 lknLtsLdLsnNqigd 16
                l +L++LdL +++i +
  MMETSP1325-20131115|8534_1 44 LRSLRVLDLRHTNIRN 59
                579**********976 PP

  == domain 4    score: 5.6 bits;  conditional E-value: 0.0096
   PF13516.1  3 nLtsLdLsnNqigd 16
                +Lt LdL +++i++
  MMETSP1325-20131115|8534_1 70 HLTALDLKGCNISN 83
                79**********98 PP

  == domain 5    score: 2.5 bits;  conditional E-value: 0.097
   PF13516.1   1 lknLtsLdLsnNqi 14 
                 +k L+ L L +N+i
  MMETSP1325-20131115|8534_1  92 NKDLRFLSLAYNHI 105
                 57799*******98 PP

  == domain 6    score: 3.0 bits;  conditional E-value: 0.064
   PF13516.1   2 knLtsLdLsnNqigd 16 
                 k+L+++ L +N++++
  MMETSP1325-20131115|8534_1 115 KSLEHIWLTGNNLTC 129
                 79**********997 PP

>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   7.5e-07    0.0015      21     111 ..       8     101 ..       2     118 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 7.5e-07
   PF13306.1  21 ssvtsIgeyaFsncsslksitlpsslteigeyaFsncssltsitips.sltsigenaFsncsslksinips.s.lttigssaFsncslksitip 111
                 + +ts+ +  Fs+ + l s+ + ++    +  +F++ +sl  +++   ++++i + +F++ ++l+ ++++  +  + i    F+n +l+ + + 
  MMETSP1325-20131115|8534_1   8 NRLTSLPSGLFSGLHTLFSLYMADNPGLTELPSFEDLRSLRVLDLRHtNIRNITSGTFNGLDHLTALDLKGcNiSNLIRAGTFANKDLRFLSLA 101
                 56999*******************999999999************7659*******************97545255799999999999877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 791.65
//
Query:       MMETSP1325-20131115|8532_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-20   72.6   0.0      4e-20   71.9   0.0    1.3  1  PF08241.7  Methyltransferase domain
    5.3e-20   71.4   0.0      8e-20   70.8   0.0    1.2  1  PF13847.1  Methyltransferase domain
    2.9e-14   52.6   0.0    6.2e-14   51.5   0.0    1.4  2  PF01209.13 ubiE/COQ5 methyltransferase family
    9.5e-13   48.2   0.0    1.5e-12   47.6   0.0    1.3  1  PF13649.1  Methyltransferase domain
    1.4e-11   44.6   0.0    2.1e-11   44.0   0.0    1.3  1  PF08242.7  Methyltransferase domain
    2.7e-11   43.9   0.0    4.3e-11   43.2   0.0    1.3  1  PF12847.2  Methyltransferase domain
    1.1e-09   38.2   0.0    1.8e-09   37.4   0.0    1.3  1  PF13659.1  Methyltransferase domain
    7.7e-09   35.3   0.0    1.1e-08   34.7   0.0    1.3  1  PF13489.1  Methyltransferase domain
      2e-05   23.9   0.0    3.2e-05   23.2   0.0    1.3  1  PF05175.9  Methyltransferase small domain
    6.3e-05   22.5   0.2    0.00021   20.8   0.2    1.8  1  PF05148.10 Hypothetical methyltransferase
    0.00011   21.7   0.0    0.00015   21.2   0.0    1.2  1  PF06080.7  Protein of unknown function (DUF938)
     0.0017   17.3   0.0     0.0063   15.4   0.0    1.8  2  PF02390.12 Putative methyltransferase
     0.0018   17.3   0.0     0.0026   16.8   0.0    1.2  1  PF03848.9  Tellurite resistance protein TehB
     0.0054   15.6   0.0     0.0098   14.7   0.0    1.4  2  PF07091.6  Ribosomal RNA methyltransferase (FmrO)
  ------ inclusion threshold ------
      0.048   13.1   0.0       0.11   11.9   0.0    1.6  2  PF01170.13 Putative RNA methylase family UPF0020
       0.18   10.3   0.0       0.24    9.9   0.0    1.1  1  PF05958.6  tRNA (Uracil-5-)-methyltransferase
        0.2   10.6   0.0       0.32    9.9   0.0    1.2  1  PF02353.15 Mycolic acid cyclopropane synthetase


Domain annotation for each model (and alignments):
>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.9   0.0     5e-23     4e-20       1      94 [.      23     121 ..      23     122 .. 0.98

  Alignments for each domain:
  == domain 1    score: 71.9 bits;  conditional E-value: 5e-23
   PF08241.7   1 LdvGcGtglllealaer.paarvtgvDlseemlatakerlkeegle...lvvadaeel.pfednsfDvvvssevlehledpekalkeiaRvLkpgGllv 94 
                 Ld+GcG g  ++++a++ ++  v++ D+ ++m+  a++r+k +gl    ++v d+e+l p e++s+D+v++++  ++++d +ka++e  RvLkpgG+lv
  MMETSP1325-20131115|8532_1  23 LDLGCGPGEPACHFATYyNNVPVIASDIAPTMVGLAEARAKSKGLGnveTMVLDMEDLsPIESESVDLVIAQMSYMFVPDKDKAMAETFRVLKPGGVLV 121
                 8*******************************************99999************************************************98 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.0     1e-22     8e-20       5     109 ..      20     123 ..      17     139 .. 0.94

  Alignments for each domain:
  == domain 1    score: 70.8 bits;  conditional E-value: 1e-22
   PF13847.1   5 ikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfenveFiqgdiee.leklle.esfDlvisnevlnaladpqkvlkeiervlkpggrlive 109
                 +k+lDlGCG G+ +  +a   +++  v+  Di ++++ lA+ ra+++g+ nve  + d+e+  +  +e es+Dlvi++  ++ ++d++k++ e +rvlkpgg+l+++
  MMETSP1325-20131115|8532_1  20 TKILDLGCGPGEPACHFA-TYYNNVPVIASDIAPTMVGLAEARAKSKGLGNVETMVLDMEDlSP--IEsESVDLVIAQMSYMFVPDKDKAMAETFRVLKPGGVLVAN 123
                 69****************.9999**************************************556..889***********************************976 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.0   7.7e-17   6.2e-14      40     150 ..      11     121 ..       2     133 .. 0.89
   2 ?   -3.1   0.0       3.6   2.9e+03     200     223 ..     161     184 ..     159     187 .. 0.80

  Alignments for each domain:
  == domain 1    score: 51.5 bits;  conditional E-value: 7.7e-17
  PF01209.13  40 eklvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeL.pfeddsfDvvtvsfGlrnvtDklkaLkeayrvlkpGGrlv 150
                 +k++ +  ++k+lD+ +G g+ a +++   + +  v+  Di ++m+  +e+++k +g  n+e ++ + e+L p e +s D+v        v+Dk+ka+ e +rvlkpGG lv
  MMETSP1325-20131115|8532_1  11 NKVSPEGVPTKILDLGCGPGEPACHFATYYN-NVPVIASDIAPTMVGLAEARAKSKGLGNVETMVLDMEDLsPIESESVDLVIAQMSYMFVPDKDKAMAETFRVLKPGGVLV 121
                 4555556678****************98765.678999********************************955677*********************************987 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 3.6
  PF01209.13 200 dqetlkeliedaGfksveyesltg 223
                 d++ +++ + +aGf+  + +++ g
  MMETSP1325-20131115|8532_1 161 DANVFDDYLMNAGFEFTSEHNFEG 184
                 778899999999999988888765 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.0   1.8e-15   1.5e-12       1     101 []      22     118 ..      22     118 .. 0.90

  Alignments for each domain:
  == domain 1    score: 47.6 bits;  conditional E-value: 1.8e-15
   PF13649.1   1 ildlGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskgl.kvkfvqadaralpf.eegefdlvvcaglslehlspkqlealleeiarvlkpgG 101
                 ildlGCG+G+ +  +++++  + +  vi++Di + ++ la+ r++skgl +v+ ++ d ++l+  e++++dlv+     +++   ++  ++++e++rvlkpgG
  MMETSP1325-20131115|8532_1  22 ILDLGCGPGEPACHFATYY--N-NVPVIASDIAPTMVGLAEARAKSKGLgNVETMVLDMEDLSPiESESVDLVIA---QMSYMFVPDKDKAMAETFRVLKPGG 118
                 8*****************9..4.599***********************************9762677*******...3667555677799***********9 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   2.6e-14   2.1e-11       1      99 []      23     120 ..      23     120 .. 0.85

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 2.6e-14
   PF08242.7   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirevldnirklLkpgGvl 99 
                 L++GcG G+ + +++  + ++ ++++Di p ++  a+++ ++++  n++ + l+ +dl+  +  +s+D+v+a      ++d+++++++  ++LkpgGvl
  MMETSP1325-20131115|8532_1  23 LDLGCGPGEPACHFATYYNNVPVIASDIAPTMVGLAEARAKSKGLGNVETMVLDMEDLSPIE-SESVDLVIAQMSYMFVPDKDKAMAETFRVLKPGGVL 120
                 8********************************77777777777666666666655543333.36********************************97 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   5.4e-14   4.3e-11       4     110 ..      21     123 ..      19     125 .. 0.86

  Alignments for each domain:
  == domain 1    score: 43.2 bits;  conditional E-value: 5.4e-14
   PF12847.2   4 rilDlGcGtGslslelarlrpgakvvgvDpseeslelarenaksldleeriellqgda.keelsllerfDavllkgltldallaldeprrvlealpkllkpggrlvie 110
                 +ilDlGcG G  +  +a  + +  v++ D+ + +++la+++aks +   ++e +  d+ +  + + e +D+v++       ++ ++++++++++  + lkpgg+lv +
  MMETSP1325-20131115|8532_1  21 KILDLGCGPGEPACHFATYYNNVPVIASDIAPTMVGLAEARAKS-KGLGNVETMVLDMeDLSPIESESVDLVIAQM----SYMFVPDKDKAMAETFRVLKPGGVLVAN 123
                 6*****************999999******************55.55599999999995556666666******77....3555599******************986 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.0   2.3e-12   1.8e-09       2     115 ..      20     124 ..      19     126 .. 0.92

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 2.3e-12
   PF13659.1   2 drvldpgcGsGtfllaalell.aalllgvEldpraaalaarnlaraglaervrvrqgdlrdlaellragsfdlvvtnpPygpragaraalrdlydafleaaarllkpgGvlvliv 115
                  ++ld+gcG G  + +++ +  +  +++ ++ p  + la+++++++gl ++v+  + d++dl+ ++ ++s+dlv++   y+  ++       + d ++++ +r+lkpgGvlv  v
  MMETSP1325-20131115|8532_1  20 TKILDLGCGPGEPACHFATYYnNVPVIASDIAPTMVGLAEARAKSKGL-GNVETMVLDMEDLS-PIESESVDLVIAQMSYMF-VP-------DKDKAMAETFRVLKPGGVLVANV 124
                 689*********9999999998*************************9.9************9.9***************94.33.......44789**************9866 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   1.4e-11   1.1e-08      23     119 ..      19     127 ..       3     179 .. 0.70

  Alignments for each domain:
  == domain 1    score: 34.7 bits;  conditional E-value: 1.4e-11
   PF13489.1  23 ggrvLDiGcGtGillellaen..gfdvtgvDpspaaigk........akqaqksqfdeedaae..pagkfdlivarevlehvpdpeellrqiaellkpgGylllstpna 119
                 + ++LD+GcG+G+ + ++a++  +  v++ D+ p ++g            +++++   +++     ++++dl++a ++   vpd ++++++ ++ lkpgG+l+  ++ +
  MMETSP1325-20131115|8532_1  19 PTKILDLGCGPGEPACHFATYynNVPVIASDIAPTMVGLaearakskGLGNVETMVLDMEDLSpiESESVDLVIAQMSYMFVPDKDKAMAETFRVLKPGGVLVANVWVS 127
                 568*********7777775542266999********99877665555222222222222222233566**********************************9988764 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0     4e-08   3.2e-05      32     104 ..      19      93 ..       4     129 .. 0.83

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 4e-08
                 -----B-------HHHHHHHH-TT----EEESBHHHHHHHHHHHHH----.--EEE-ST..TTT--.--BS-EEE CS
   PF05175.9  32 agkvlDlGcGaGvlgaalakespelevtlvDinarAvesakanleanklenvevlasdl..leeveekkfdlivs 104
                   k+lDlGcG G  ++++a  ++++ v + Di    v +a+a +++++l nve++  d+  l+ +e++++dl++ 
  MMETSP1325-20131115|8532_1  19 PTKILDLGCGPGEPACHFATYYNNVPVIASDIAPTMVGLAEARAKSKGLGNVETMVLDMedLSPIESESVDLVIA 93 
                 457************************************************77777666337889999***9986 PP

>> PF05148.10  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.2   2.6e-07   0.00021     108     160 ..      72     125 ..      13     134 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 2.6e-07
  PF05148.10 108 vvacdlakv.Pledesvdvavfclslm.gtnladflkeanrvlkvGGllkvaevk 160
                  ++ d+  + P+e esvd+++  +s m + +  + + e  rvlk+GG+l va+v 
  MMETSP1325-20131115|8532_1  72 TMVLDMEDLsPIESESVDLVIAQMSYMfVPDKDKAMAETFRVLKPGGVL-VANVW 125
                 4567996655***************8746789999************98.67665 PP

>> PF06080.7  Protein of unknown function (DUF938)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.9e-07   0.00015      27      87 ..      20      79 ..       5     121 .. 0.79

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.9e-07
   PF06080.7 27 ervLEiasGtGqHAvffApalpnlkwqpsdqdeelresiaawadelalsnlkpPleldvta 87
                +++L+++ G G+ A++fA+  +n+  ++sd ++++ +  +a a++ +l n+++   ld+ +
  MMETSP1325-20131115|8532_1 20 TKILDLGCGPGEPACHFATYYNNVPVIASDIAPTMVGLAEARAKSKGLGNVETM-VLDMED 79
                37*********************************9888899999*****9874.456543 PP

>> PF02390.12  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   7.9e-06    0.0063      12      81 ..       3      80 ..       1      99 [. 0.87
   2 ?   -1.0   0.0      0.82   6.6e+02     116     132 ..     105     121 ..     103     123 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 7.9e-06
                -TTTSGGGB-........EEEE--------HHHHHHH-TTSEEE---S-HHHHHHHHHHHHHH--TTB------HHHH CS
  PF02390.12 12 wkklfeneqk........lvleIGfGsGdflvalAkknPdklflGiEirqkvvekvlkkiealglkNlrilegdaekv 81
                w++++++ +k         +l++G+G G+   + A+  +++ +++ +i  ++v  + ++++ +gl N++ +  d e++
  MMETSP1325-20131115|8532_1  3 WASMLAQANKvspegvptKILDLGCGPGEPACHFATYYNNVPVIASDIAPTMVGLAEARAKSKGLGNVETMVLDMEDL 80
                66666666667777777789************************************************9998887765 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.82
                 THHHHHHHHB-----EE CS
  PF02390.12 116 ellkelarvLkkgGvle 132
                 + ++e  rvLk+gGvl 
  MMETSP1325-20131115|8532_1 105 KAMAETFRVLKPGGVLV 121
                 6678999********97 PP

>> PF03848.9  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.2e-06    0.0026      31     109 ..      19     102 ..       4     127 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.2e-06
                 ---EEE-------HHHHHHH..----EEEEES-HHHHHHHHHHHHHTT-T.EEEEE--GGG--.-.---BSEEEEES-GGGS-G CS
   PF03848.9  31 pgkaldlGcGqGrnslflsl..lgydvtavdkneasiailqeiaekenld.lkaalydinaas.l.deeydfilstvvlmflqa 109
                 p+k+ldlGcG G  + +++   ++  v a d   + +   +  a+   l  +++ + d++++s + +e+ d++++ + +mf+  
  MMETSP1325-20131115|8532_1  19 PTKILDLGCGPGEPACHFATyyNNVPVIASDIAPTMVGLAEARAKSKGLGnVETMVLDMEDLSpIeSESVDLVIAQMSYMFVPD 102
                 78*************999972245567899999999999999888888876********99874435789***********854 PP

>> PF07091.6  Ribosomal RNA methyltransferase (FmrO)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.2e-05    0.0098     104     182 ..      17      98 ..       9     128 .. 0.77
   2 ?   -3.7   0.0       5.4   4.3e+03      21      48 ..     213     240 ..     210     247 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.2e-05
   PF07091.6 104 ptpasvlDlaCgLnplavpwmklaedatylasDidkalvefieaflallgv.egevevr..dlladvpeeeaDvaLllKllp 182
                 ++p+++lDl+Cg    a  +++  +++ ++asDi  ++v + ea ++ +g  ++e+ v   + l+ +++e++D++++   + 
  MMETSP1325-20131115|8532_1  17 GVPTKILDLGCGPGEPACHFATYYNNVPVIASDIAPTMVGLAEARAKSKGLgNVETMVLdmEDLSPIESESVDLVIAQMSYM 98 
                 679***********99*************************99998887762334444412445667777888777655555 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 5.4
   PF07091.6  21 lakrkdlkeaekatkkkLHqvvGaylea 48 
                 l++ +   +a +++k++  +v++ y+++
  MMETSP1325-20131115|8532_1 213 LEESGAHPDAWEKAKAAFPEVAAPYVNE 240
                 5677788888999999999999999854 PP

>> PF01170.13  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00014      0.11      60     116 ..      41      97 ..       8     111 .. 0.82
   2 ?   -2.5   0.0       3.5   2.8e+03      39      54 ..     242     257 ..     242     275 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00014
  PF01170.13  60 eelklyglDidervvqgakeNaeeagvgdkiefvkadaakle.llegevdvivtnpPY 116
                 +++ ++++Di + +v  a++ a++ g+g+  e    d  +l+   +++vd++++ + Y
  MMETSP1325-20131115|8532_1  41 NNVPVIASDIAPTMVGLAEARAKSKGLGNV-ETMVLDMEDLSpIESESVDLVIAQMSY 97 
                 35569*********************9875.555669****987778******99877 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 3.5
  PF01170.13  39 sGtilIEaallgakia 54 
                 sG++ +E++++++ ++
  MMETSP1325-20131115|8532_1 242 SGGVTVEGGVQARCCP 257
                 89******99988777 PP

>> PF05958.6  tRNA (Uracil-5-)-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0    0.0003      0.24     197     257 ..      19      81 ..       2      90 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0003
   PF05958.6 197 kgdllelycGnGnfslalaekfek..vlateiakssveaaqanieankidnvqiirlsaeelt 257
                    +l+l cG G+ +  +a+ ++   v+a +ia + v  a a  ++  + nv+ + l  e+l+
  MMETSP1325-20131115|8532_1  19 PTKILDLGCGPGEPACHFATYYNNvpVIASDIAPTMVGLAEARAKSKGLGNVETMVLDMEDLS 81 
                 4589***************999873369***************************99999987 PP

>> PF02353.15  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0    0.0004      0.32      65     163 ..      21     121 ..      14     129 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0004
                 EEEE-------HHHHHHHHH.--EEE--BS-HHHHHHHHHHHHCS-SSS-B---B---TT---....--SEEEE---GGGT--TCHHHHHHHHHHCS-----EE CS
  PF02353.15  65 tlLdiGcGWGslvrravery.dvkvvglTlSkeqaklakqrvdeldlerkvevklldyedlde....kvdrvvsvgafehvgkenydtffkklkkllkedGlll 163
                 ++Ld+GcG G+ + + +  y +v v++  +      la++r ++ +l + ve  +ld edl+      vd v++ ++   + +   d+ +++++++lk++G+l+
  MMETSP1325-20131115|8532_1  21 KILDLGCGPGEPACHFATYYnNVPVIASDIAPTMVGLAEARAKSKGLGN-VETMVLDMEDLSPieseSVDLVIA-QMSY-MFVPDKDKAMAETFRVLKPGGVLV 121
                 79*********9998888884699**********999999999999765.566677888886553335555543.3333.333444556667777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 1350.67
//
Query:       MMETSP1325-20131115|8535_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-08   31.6   0.1    8.3e-08   31.6   0.0    1.1  1  PF00722.16 Glycosyl hydrolases family 16
  ------ inclusion threshold ------
       0.01   15.1   0.2      0.017   14.4   0.1    1.3  1  PF08778.5  HIF-1 alpha C terminal transactivation domain


Domain annotation for each model (and alignments):
>> PF00722.16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   1.2e-11   8.3e-08      57     101 ..       2      45 ..       1      71 [. 0.83

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 1.2e-11
                 ------EEEEEEE-TTT----EEEEE.EEE---TTEEEEEEE---- CS
  PF00722.16  57 akgaGvvtafwlssedewdqhdEIDi.EflGndtgkvqtnvygngk 101
                 ++g G+++afwl + d w+  +EIDi E +  dt+ v t++++n  
  MMETSP1325-20131115|8535_1   2 PTGCGTWPAFWLVGPD-WPYGGEIDIiEGV-DDTSVVATTLHTNEG 45 
                 6788********9866.*************.9999*******9865 PP

>> PF08778.5  HIF-1 alpha C terminal transactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   2.5e-06     0.017      11      24 ..      62      75 ..      59      81 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.5e-06
   PF08778.5 11 ryDCEVNAPlqgrq 24
                 yDC VNAP q+++
  MMETSP1325-20131115|8535_1 62 SYDCDVNAPDQANN 75
                6********87776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|8530_1  [L=563]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-11   41.6   0.1    1.4e-10   41.1   0.1    1.2  1  PF02141.16 DENN (AEX-3) domain


Domain annotation for each model (and alignments):
>> PF02141.16  DENN (AEX-3) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.1     1e-14   1.4e-10      98     177 ..       3      81 ..       1      85 [. 0.94

  Alignments for each domain:
  == domain 1    score: 41.1 bits;  conditional E-value: 1e-14
  PF02141.16  98 lqlfeavLlErriillSeklarLtsvaealvallyPlkWqhiyiPvlpaslldvlsaPtPfiiGvesslleleekpledv 177
                 +q ++++++E ++ ++  ++   +s + al+a+l+P  + ++ iP+lp+++  vl+aP+P +iGv+  +l+ +e+p  dv
  MMETSP1325-20131115|8530_1   3 MQTLAVLMSELQLFVVGGETGHYSSTVLALAAFLRPVLYVYPIIPILPKQMETVLHAPVPLLIGVTGPYLS-REEPSGDV 81 
                 667889999*************************************************************9.88888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.57
# Mc/sec: 2326.12
//
Query:       MMETSP1325-20131115|8537_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|8536_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0089   15.9   0.1      0.011   15.5   0.1    1.1  1  PF03245.8 Bacteriophage lysis protein


Domain annotation for each model (and alignments):
>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   8.4e-07     0.011      29      63 ..      16      50 ..       8      60 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 8.4e-07
   PF03245.8 29 rqravaeldakhteeLadaksendrLradvaaGrr 63
                r+ +  ++   +teeLa  k+e+ rL+a++a G+ 
  MMETSP1325-20131115|8536_1 16 RDTKSENVLMDYTEELAAEKAEISRLEARLAGGED 50
                55555566667********************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       463  (0.0338648); expected 273.4 (0.02)
Passed bias filter:                      406  (0.0296957); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 601.53
//
Query:       MMETSP1325-20131115|8539_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   14.8   0.0      0.021   14.8   0.0    1.1  1  PF12572.3 Protein of unknown function (DUF3752)


Domain annotation for each model (and alignments):
>> PF12572.3  Protein of unknown function (DUF3752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.6e-06     0.021      73     100 ..      16      43 ..       2      71 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.6e-06
   PF12572.3  73 daemakkvdeynekkrgksLveqhqekq 100
                 ++++++ +++ n+++r+ s +e+hq+  
  MMETSP1325-20131115|8539_1  16 KEKRDTMMERMNSSHRSGSFYERHQTNV 43 
                 3335789******************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|8542_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|8541_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.3    8.7   4.8       0.24   11.0   0.8    1.7  2  PF00612.22 IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.21   2.9e+03       6       9 ..      17      20 ..      17      21 .. 0.82
   2 ?   11.0   0.8   1.7e-05      0.24       2      18 ..      25      41 ..      24      43 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.21
                HHHH CS
  PF00612.22  6 kIQa 9 
                kIQ+
  MMETSP1325-20131115|8541_1 17 KIQK 20
                7997 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 1.7e-05
                HHHHHHHHHHHHHHHHC CS
  PF00612.22  2 kaaikIQaawRgylaRk 18
                +aa  +Qaa Rg ++R 
  MMETSP1325-20131115|8541_1 25 AAAAALQAAARGRRQRS 41
                69999*********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       685  (0.0501024); expected 273.4 (0.02)
Passed bias filter:                      492  (0.035986); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 196.07
//
Query:       MMETSP1325-20131115|8545_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       895  (0.0654623); expected 273.4 (0.02)
Passed bias filter:                      473  (0.0345963); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 738.47
//
Query:       MMETSP1325-20131115|8547_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.065   12.6   0.2      0.072   12.4   0.1    1.0  1  PF14066.1 Protein of unknown function (DUF4256)


Domain annotation for each model (and alignments):
>> PF14066.1  Protein of unknown function (DUF4256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   5.3e-06     0.072      75     133 ..      16      76 ..       4      83 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 5.3e-06
   PF14066.1  75 slcydkealesrkenkPessavdlaaemgi..ellteeqyrelqelgefdlktssWiktpe 133
                  +  d ea ++ ke++ +  a ++a+e+ +  e l e q rel+e+++ d + + Wi+  e
  MMETSP1325-20131115|8547_1  16 AVFLDMEAEKKAKEEEKRALAAKAAEEVRLerERLLEIQTRELDEMEAEDYRWEDWIQERE 76 
                 567799999999999999999999999876225799*********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       881  (0.0644383); expected 273.4 (0.02)
Passed bias filter:                      506  (0.0370099); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.41s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 365.99
//
Query:       MMETSP1325-20131115|8551_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|8548_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 714.30
//
Query:       MMETSP1325-20131115|8540_1  [L=484]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.8e-11   40.5  10.6    2.9e-10   39.0   7.4    1.7  1  PF04906.8 Tweety


Domain annotation for each model (and alignments):
>> PF04906.8  Tweety
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   7.4   2.1e-14   2.9e-10       6     291 ..     116     420 ..     114     439 .. 0.69

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 2.1e-14
   PF04906.8   6 stfrpedesyqqsllllasvaaallalsLllllvYlltlCCdrrk...eeeeeskdsccvtwsvviatlvccaaigvGfYGNsetndGvlqltyslrkanhtlagikklvseteesleekleqeLtkleeifakrtd......lletlrllqeqveeivqqlseipfwkeaelsltelaekvelvelyR.Wlgy.l.llllldlviClllllglarkskcllivvlvlgllalvlsWaslglelasavgasDfCvs.P........dkyvvkqtkeelv.......sdilqyylsCsqsrtnpFqqrLtesqka 291
                 + f   d++y+ +++ l+++ aa+     l+++v+l++lCC+      +++   + s + tw vv++ + ++a++g  + G s+++ G  ++ +sl  +++ +a++  l ++++  l++k +++ t+ + + +++ +       ++++   +  +   v+  ++++ +  a+  + e+ +  e  e +R W++  l +l+ ++ v  ++  lg++ k+ +ll + ++ g+la+++  +++++el+ +v ++D+Cv  P        d +   +tk  ++       +d++ yy+sC+ +++ p   + +   + 
  MMETSP1325-20131115|8540_1 116 NVFDIGDQTYLTAIIGLGALVAAI---GFLMVFVWLVFLCCRSCVdccRRDAICRTSVSRTWLVVVIFVAMTASVG-SYQGWSNFSTGCDKMENSLAIVENQFATMAMLGNDLK--LQSKAMEQ-TTGHFVCDNHGEpatddgEITAIAHAKDFAAGSVKINKALSWIGPANALIVEMYRVIE--EHMRvWVTKgLnALVGVLSVFAAFGWLGIMCKAPALLNLASFWGILAMLVIVLLIAVELSLSVMLADLCVYgPalgtieatDVFSSAVTKLGVNfnigaipTDVALYYMSCDAAHPIPTSYSPQAITNL 420
                 5688899******99888766554...3444444444444443320003334444678999999999999999887.477*************************998887764..44443333.2333344444444445677888888888888888888888877777766666665554..344436654231444556678889999******************************************8434222222225565555554444556677799999*****999987766555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       764  (0.0558806); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.49s 00:00:01.24 Elapsed: 00:00:00.57
# Mc/sec: 1999.72
//
Query:       MMETSP1325-20131115|8554_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 402.25
//
Query:       MMETSP1325-20131115|8555_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.4    9.8   4.8       0.36    9.9   3.4    1.0  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal
        1.1    8.5   6.0       0.93    8.6   4.1    1.1  1  PF05308.6  Mitochondrial fission regulator
        4.3    6.9   6.1          4    7.0   4.2    1.0  1  PF13622.1  Thioesterase-like superfamily


Domain annotation for each model (and alignments):
>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.4   7.9e-05      0.36     233     248 ..       2      17 ..       1      31 [. 0.65

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 7.9e-05
                 XXXXXXXXXX...... CS
  PF01213.14 233 PppPpppppPsvdtik 248
                 PppPpppppP++ + +
  MMETSP1325-20131115|8555_1   2 PPPPPPPPPPQKLEED 17 
                 7888888888544333 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   4.1    0.0002      0.93     191     205 ..       2      16 ..       1      28 [. 0.70

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0002
   PF05308.6 191 ppppPpPlpavslqq 205
                 ppppPpP+p+ +l++
  MMETSP1325-20131115|8555_1   2 PPPPPPPPPPQKLEE 16 
                 566666666666665 PP

>> PF13622.1  Thioesterase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.2   0.00088         4     103     128 ..       2      27 ..       1      35 [] 0.52

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00088
   PF13622.1 103 peppppapppdddplaadgedgvpge 128
                 p+pppp+ppp++ ++++dg+++v+++
  MMETSP1325-20131115|8555_1   2 PPPPPPPPPPQKLEEDEDGDGDVDVD 27 
                 45566666666666666555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.26u 0.41s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 164.46
//
Query:       MMETSP1325-20131115|8553_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.63
# Mc/sec: 840.63
//
Query:       MMETSP1325-20131115|8556_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0012   18.9 103.2        0.5   10.4  30.3    3.6  3  PF13634.1 Nucleoporin FG repeat region
  ------ inclusion threshold ------
      0.027   14.7  42.8       0.19   12.0   2.4    3.3  3  PF12815.2 Spt5 C-terminal nonapeptide repeat binding Spt4
        0.2   11.1   2.1         15    5.2   0.1    3.2  2  PF07871.6 Protein of unknown function (DUF1658)


Domain annotation for each model (and alignments):
>> PF13634.1  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4  30.3   0.00011       0.5      11     111 ..       4      94 ..       1     109 [. 0.61
   2 !    9.5  30.8   0.00021      0.96       6      84 ..     107     184 ..      92     211 .. 0.59
   3 !    5.4   3.7    0.0039        18      11      80 ..     248     277 ..     236     282 .] 0.41

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00011
   PF13634.1  11 tsgglFGskpatggglFGasasqtastaggglFGssntkatsttggglFGssattt.asstsgglFGsstattqtttgggl..FGqaqaaqtqqssssttaggg 111
                 ++ g+FG++pa ++ +FG++a  +  ++++++FG++++      ++  FG++++++ +++++ g FG++++t +    gg+  FGq q++q++q  +     ++
  MMETSP1325-20131115|8556_1   4 STAGAFGAAPA-QTPAFGSTAG-AFGAQKPSMFGGAAA------TTPAFGQPPAQQqQQQPAMGAFGAPAQTPAPFG-GGTtgFGQPQQQQQSQFGQ----PKS 94 
                 68899**9998.6788888875.567777888888864......456788877555255666788888776554433.3332477777776654222....222 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00021
   PF13634.1   6 q.qaaatsgglFGskpa.tggglFGasasqtastaggglFGssntkatsttggglFGssatttasstsgglFGsstattqt 84 
                 +  +++t+gg+FG+kpa  ++g+FGa+as++a  ++gg FG++++ +++++gg+  G+      ++++++ FG++++++++
  MMETSP1325-20131115|8556_1 107 AfGSSPTAGGAFGQKPAfGATGAFGAAASTPAFGTSGGAFGQPAQPQQQAAGGFGVGGGFG---QPQQQNAFGQPAQQQGA 184
                 3345677777777777777777777777777777777777777765555555444444332...45555666666543322 PP

  == domain 3    score: 5.4 bits;  conditional E-value: 0.0039
   PF13634.1  11 tsgglFGskpatggglFGasasqtastaggglFGssntkatsttggglFGssatttasstsgglFGssta 80 
                 ++ g+FG+ pa+++  FG++a                                       +++ FG+++a
  MMETSP1325-20131115|8556_1 248 PGVGAFGQ-PAAATPTFGQPA---------------------------------------ATPAFGQPAA 277
                 23333332.333333333332.......................................2333333222 PP

>> PF12815.2  Spt5 C-terminal nonapeptide repeat binding Spt4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   9.9    0.0018       8.1      11      82 ..      12      84 ..       1     102 [. 0.41
   2 ?    5.9   8.3    0.0032        15      10      84 ..     100     176 ..      95     212 .. 0.62
   3 ?   12.0   2.4   4.3e-05      0.19      31      57 ..     253     282 .]     204     282 .] 0.71

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0018
   PF12815.2 11 sgsrtPawkadgsrTpayead........gsrTPawgsgskTPafeagsrTPaygaesetsrtPaygegatlgaptpgaa 82
                + ++tPa+   gs + a++a+           TPa+g   + Pa ++ ++ Pa+ga + +++tPa  +g+t g  +p+++
  MMETSP1325-20131115|8556_1 12 APAQTPAF---GSTAGAFGAQkpsmfggaAATTPAFG---QPPA-QQQQQQPAMGAFGAPAQTPAPFGGGTTGFGQPQQQ 84
                23344444...33333333323333333333333332...3333.55555555555555555555444222222222222 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0032
   PF12815.2  10 asgsrtPawkadgsrTpayeadgsrTPawgsgskTPafeagsrTPaygaesetsrtPayge..................gatlgaptpgaapa 84 
                 ++g+ +Pa+    ++ p+ +++ ++ Pa+g    T af+a ++TPa+g++++    Pa ++                  +         +a  
  MMETSP1325-20131115|8556_1 100 TTGGSAPAF----GSSPTAGGAFGQKPAFG---ATGAFGAAASTPAFGTSGGAFGQPAQPQqqaaggfgvgggfgqpqqQ---------NAFG 176
                 568899999....34455556689999996...89999**********99988555666556668778885444444332.........3221 PP

  == domain 3    score: 12.0 bits;  conditional E-value: 4.3e-05
   PF12815.2  31 d...gsrTPawgsgskTPafeagsrTPayg 57 
                       +TP++g+ + TPaf++ + TPa+g
  MMETSP1325-20131115|8556_1 253 FgqpAAATPTFGQPAATPAFGQPAATPAFG 282
                 144466777777777777777777777775 PP

>> PF07871.6  Protein of unknown function (DUF1658)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1    0.0033        15       9      19 ..     106     116 ..     105     116 .. 0.93
   2 ?    3.9   0.1    0.0082        37      10      30 .]     117     137 ..     117     137 .. 0.92

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0033
   PF07871.6   9 lafprrPlhGn 19 
                 +af++ P++G+
  MMETSP1325-20131115|8556_1 106 PAFGSSPTAGG 116
                 9*********7 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.0082
   PF07871.6  10 afprrPlhGndgpftnsaetp 30 
                 af+  P  G +g+f+ +a tp
  MMETSP1325-20131115|8556_1 117 AFGQKPAFGATGAFGAAASTP 137
                 89999***********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                       87  (0.00636337); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 1325.04
//
Query:       MMETSP1325-20131115|8557_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 498.83
//
Query:       MMETSP1325-20131115|8538_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 971.38
//
Query:       MMETSP1325-20131115|8559_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.032   12.4   0.0      0.035   12.3   0.0    1.0  1  PF08192.6  Peptidase family S64
      0.069   12.1   3.0      0.092   11.7   2.1    1.3  1  PF01056.13 Myc amino-terminal region
       0.12   12.1   5.4       0.26   11.1   3.7    1.5  1  PF04871.8  Uso1 / p115 like vesicle tethering protein, C terminal region


Domain annotation for each model (and alignments):
>> PF08192.6  Peptidase family S64
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.8e-06     0.035     141     268 ..      63     186 ..       6     193 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 7.8e-06
   PF08192.6 141 slessqplqtlnikeeseeskekeeeesvedelkeLeedlaaimdqinnsvinlskavinaidlfkkFvsfletiseeelqyevttenssslrkiiKivlhfyDnLLqsevyiklkllLlknfndfak 268
                 ++ +s+    +  ++ +ee  +    ++v+ e+++ + dl+ ++ ++ +     +ka++++ d + +    le + ++e + ++ +e++ ++ +i  + l+  D+  +    ++ + lLl++  +fa 
  MMETSP1325-20131115|8559_1  63 TMFDSRKSDGSDSDSDDEEDMDIIRMTKVRSEMNRKSSDLTLMIREYIETAKVSAKASTAMLDEVNEL---LELL-SDEEAKHIDVEKTMAMVNICFVWLKKCDDDPSVVTNTRHRELLLRAIFEFAA 186
                 3333444555666677777777888889*********************999999****999999999...5555.67888899********************988888888999******999986 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.1     2e-05     0.092     204     261 ..      43     100 ..      24     130 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2e-05
  PF01056.13 204 aaptpelvlrtspn..sssssgedseseeeeeeeeeeeeeeeiDvvtvekrrsssrekes 261
                 aa+t ++v+    n  +s  +  ds   +++ ++ ++++ee++D++ + k rs+ ++k+s
  MMETSP1325-20131115|8559_1  43 AASTSDPVTPFDQNdvPSRRTMFDS--RKSDGSDSDSDDEEDMDIIRMTKVRSEMNRKSS 100
                 3333333333333311444444444..578889999**************9888776644 PP

>> PF04871.8  Uso1 / p115 like vesicle tethering protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.7   5.6e-05      0.26      54     100 ..      97     141 ..      66     148 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5.6e-05
   PF04871.8  54 kkeleksasttkeleaikekldeEalkesqkeqdDLLvlladqeeKv 100
                 +k  + + ++ + +e+ k  +++ a +++ +e + LL+ll d+e+K 
  MMETSP1325-20131115|8559_1  97 RKSSDLTLMIREYIETAK--VSAKASTAMLDEVNELLELLSDEEAKH 141
                 344455555555666655..5555779******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       887  (0.0648771); expected 273.4 (0.02)
Passed bias filter:                      568  (0.0415448); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.44s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 868.68
//
Query:       MMETSP1325-20131115|8560_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.1   0.0       0.11   11.9   0.0    1.1  1  PF09585.5 Conserved hypothetical protein (Lin0512_fam)


Domain annotation for each model (and alignments):
>> PF09585.5  Conserved hypothetical protein (Lin0512_fam)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     8e-06      0.11      23      69 ..      27      73 ..      12      85 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8e-06
   PF09585.5 23 krAvkdAishnslpglaellgldleemkvevkvgvprpekvdeeavk 69
                +rA+++  ++ns    +++l  + +  k+e+++g+p+  ++d ++++
  MMETSP1325-20131115|8560_1 27 VRAIRNRPRENSFNLTSAILAAQRGISKLEIQLGIPNAAAMDPNEIE 73
                69***********55555777799999**************999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 422.63
//
Query:       MMETSP1325-20131115|8561_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-33  115.8   0.1    1.4e-33  115.6   0.0    1.0  1  PF02771.11 Acyl-CoA dehydrogenase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF02771.11  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.6   0.0   1.1e-37   1.4e-33       1     113 []      13     125 ..      13     125 .. 0.98

  Alignments for each domain:
  == domain 1    score: 115.6 bits;  conditional E-value: 1.1e-37
                 -HHHHHHHHHHHHHHHHHTTTTHHHHHHHT---HHHHHHHHH---TSTTS-TT-------HHHHHHHHHHHHHH--TTCHHHHHHHHCCHHHHHH---HHHHHHHHHHHHCSS CS
  PF02771.11   1 teeqealrdevrefaeeelapeaaewdeeeefprelwrklaelGllgitvpeeyGGagldalelalvleelaradaglavalgvhsslvapailrfGteeqkkkyLpklasge 113
                 +ee++++r++ r+fae+el p a + d++++fp e + +++elGl+g++v  eyGG+gld+l++ + lee++r++a+++v+++v++sl + ++ +fGt +qk+++L + a+ge
  MMETSP1325-20131115|8561_1  13 SEEHQMIREMSRQFAETELMPIAGDLDKDHRFPAEQIAAIGELGLMGVAVSDEYGGSGLDYLAYSIGLEEISRGCASTGVIMSVNNSLYCGPVEKFGTHAQKEEFLTPYARGE 125
                 79************************9999***999****************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 688.32
//
Query:       MMETSP1325-20131115|8563_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-15   55.6  10.6     0.0011   18.6   0.0    7.5  7  PF13516.1  Leucine Rich repeat
    0.00026   20.4   5.6     0.0017   17.8   0.1    3.4  3  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.017   14.9   1.8         31    5.0   0.0    4.9  5  PF00560.28 Leucine Rich Repeat
      0.093   12.0   0.0       0.32   10.3   0.0    1.9  2  PF02803.13 Thiolase, C-terminal domain
       0.22   11.7   7.3         45    4.7   0.0    5.5  6  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0021       5.6       5      23 ..     109     127 ..     100     128 .. 0.89
   2 !    6.0   0.0    0.0051        14       6      23 ..     141     158 ..     136     159 .. 0.86
   3 !    9.9   0.0   0.00027      0.74       2      23 ..     167     189 ..     166     190 .. 0.89
   4 ?    3.9   0.0     0.025        67       1      16 [.     195     210 ..     195     218 .. 0.83
   5 !    6.2   0.3    0.0044        12       4      24 .]     227     247 ..     226     247 .. 0.91
   6 !   18.6   0.0     4e-07    0.0011       1      23 [.     252     274 ..     252     275 .. 0.93
   7 ?    3.0   0.0     0.046   1.2e+02       8      22 ..     289     305 ..     285     308 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0021
   PF13516.1   5 tsLdLsnNqigdeGlsaLa 23 
                 +sL++   +igdeG++ La
  MMETSP1325-20131115|8563_1 109 KSLRIWWSNIGDEGCKPLA 127
                 78999999*******9887 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0051
   PF13516.1   6 sLdLsnNqigdeGlsaLa 23 
                 +L L +N+ig  G+ aL+
  MMETSP1325-20131115|8563_1 141 YLELWDNNIGPAGALALG 158
                 78899*********9997 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00027
   PF13516.1   2 knLtsLdLsnNq.igdeGlsaLa 23 
                  +L +L L +N  +g eG+ aL+
  MMETSP1325-20131115|8563_1 167 RSLLTLKLDYNRdLGTEGVAALC 189
                 67889******77*********9 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.025
   PF13516.1   1 lknLtsLdLsnNqigd 16 
                 +++L+ L+L +++i++
  MMETSP1325-20131115|8563_1 195 NSTLKQLHLPYCNIDS 210
                 689***********86 PP

  == domain 5    score: 6.2 bits;  conditional E-value: 0.0044
   PF13516.1   4 LtsLdLsnNqigdeGlsaLan 24 
                 Lt L+L +Nq+ +eGl  L++
  MMETSP1325-20131115|8563_1 227 LTMLNLKGNQLRGEGLLDLCK 247
                 6779************99996 PP

  == domain 6    score: 18.6 bits;  conditional E-value: 4e-07
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLa 23 
                 + +L +LdLs+N+ig e+++aL+
  MMETSP1325-20131115|8563_1 252 NRSLVDLDLSDNDIGEEDVEALS 274
                 5799*****************97 PP

  == domain 7    score: 3.0 bits;  conditional E-value: 0.046
   PF13516.1   8 dLs..nNqigdeGlsaL 22 
                 ++s  +N ig +G+ aL
  MMETSP1325-20131115|8563_1 289 NISllYNRIGVDGANAL 305
                 455559********998 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.2     0.052   1.4e+02       4      34 ..     140     177 ..     138     188 .. 0.67
   2 ?    0.8   0.0      0.13   3.6e+02      25      38 ..     197     210 ..     187     219 .. 0.69
   3 !   17.8   0.1   6.1e-07    0.0017       3      43 ..     227     274 ..     226     277 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.052
   PF12799.2   4 evLdLsnNnIkd.....lppe..lanLpnLktLnLsnN 34 
                  +L L +NnI       l+ +  +++ ++L tL L++N
  MMETSP1325-20131115|8563_1 140 NYLELWDNNIGPagalaLGRSlmVGSNRSLLTLKLDYN 177
                 68999999997411222444344567777777777777 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.13
   PF12799.2  25 nLktLnLsnNpisd 38 
                  Lk+L+L +++i++
  MMETSP1325-20131115|8563_1 197 TLKQLHLPYCNIDS 210
                 46666666666654 PP

  == domain 3    score: 17.8 bits;  conditional E-value: 6.1e-07
   PF12799.2   3 LevLdLsnNnIkd...lppe..lanLpnLktLnLsnNpi..sdlsaLa 43 
                 L++L+L +N++     l+    + + ++L  L+Ls N i  +d++aL+
  MMETSP1325-20131115|8563_1 227 LTMLNLKGNQLRGeglLDLCkgIEKNRSLVDLDLSDNDIgeEDVEALS 274
                 9********9984455442233*****************544777775 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.48   1.3e+03       3      13 ..     140     150 ..     138     162 .. 0.83
   2 ?   -1.7   0.0       1.8   4.9e+03       1      11 [.     168     179 ..     168     189 .. 0.81
   3 ?   -0.4   0.0      0.64   1.7e+03       2      13 ..     198     209 ..     197     219 .. 0.82
   4 ?    3.8   0.0     0.027        75       2      13 ..     227     238 ..     226     251 .. 0.80
   5 ?    5.0   0.0     0.011        31       1      14 [.     254     267 ..     254     306 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.48
                 SEEEETSSBCB CS
  PF00560.28   3 eeLdLsgNnlt 13 
                  +L L +Nn+ 
  MMETSP1325-20131115|8563_1 140 NYLELWDNNIG 150
                 6999****996 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 1.8
                 TESEEEETSS.B CS
  PF00560.28   1 nLeeLdLsgN.n 11 
                 +L +L L++N  
  MMETSP1325-20131115|8563_1 168 SLLTLKLDYNrD 179
                 578999999955 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.64
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                 L+ L+L ++n+ 
  MMETSP1325-20131115|8563_1 198 LKQLHLPYCNID 209
                 899***9**996 PP

  == domain 4    score: 3.8 bits;  conditional E-value: 0.027
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                 L+ L+L gN+l 
  MMETSP1325-20131115|8563_1 227 LTMLNLKGNQLR 238
                 889*******97 PP

  == domain 5    score: 5.0 bits;  conditional E-value: 0.011
                 TESEEEETSSBCBC CS
  PF00560.28   1 nLeeLdLsgNnlts 14 
                 +L  LdLs+N + +
  MMETSP1325-20131115|8563_1 254 SLVDLDLSDNDIGE 267
                 5888******9985 PP

>> PF02803.13  Thiolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00012      0.32      73     113 ..     152     192 ..     136     198 .. 0.90
   2 ?   -2.1   0.0      0.77   2.1e+03      45      57 ..     270     282 ..     224     305 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00012
                 ---------------HHHHHHHHHHHHT..----EE----- CS
  PF02803.13  73 GGaialGHPlGasGaRilvtllselkkeggklglaalCigg 113
                  Ga+alG  l +   R l tl    +++ g+ g+aalC g 
  MMETSP1325-20131115|8563_1 152 AGALALGRSLMVGSNRSLLTLKLDYNRDLGTEGVAALCRGL 192
                 49************************************996 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.77
                 BEE--SBHHHHHH CS
  PF02803.13  45 fEinEAFaaqala 57 
                 +E+  AFa+ +++
  MMETSP1325-20131115|8563_1 270 VEALSAFAGALMM 282
                 5556667666554 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         5   1.4e+04       4      13 ..     109     118 ..     108     120 .. 0.75
   2 ?   -1.5   0.1         2   5.3e+03       5      13 ..     141     149 ..     140     150 .. 0.84
   3 ?   -0.1   0.1      0.64   1.8e+03       2      13 ..     168     180 ..     159     183 .. 0.78
   4 ?    3.2   0.0     0.054   1.5e+02       2      15 ..     197     210 ..     196     212 .. 0.87
   5 ?    1.8   0.1      0.16   4.4e+02       3      14 ..     227     238 ..     226     243 .. 0.85
   6 ?    4.7   0.0     0.016        45       2      14 ..     254     266 ..     253     271 .. 0.87

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 5
   PF13504.1   4 keLdLsgnrL 13 
                 k L++++ ++
  MMETSP1325-20131115|8563_1 109 KSLRIWWSNI 118
                 7899998766 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 2
   PF13504.1   5 eLdLsgnrL 13 
                 +L L++n++
  MMETSP1325-20131115|8563_1 141 YLELWDNNI 149
                 699***987 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.64
   PF13504.1   2 nLkeLdLsgnr.L 13 
                 +L +L L +nr L
  MMETSP1325-20131115|8563_1 168 SLLTLKLDYNRdL 180
                 6778888888866 PP

  == domain 4    score: 3.2 bits;  conditional E-value: 0.054
   PF13504.1   2 nLkeLdLsgnrLts 15 
                  Lk+L+L +++++s
  MMETSP1325-20131115|8563_1 197 TLKQLHLPYCNIDS 210
                 69********9875 PP

  == domain 5    score: 1.8 bits;  conditional E-value: 0.16
   PF13504.1   3 LkeLdLsgnrLt 14 
                 L+ L+L gn+L 
  MMETSP1325-20131115|8563_1 227 LTMLNLKGNQLR 238
                 888*******95 PP

  == domain 6    score: 4.7 bits;  conditional E-value: 0.016
   PF13504.1   2 nLkeLdLsgnrLt 14 
                 +L +LdLs+n++ 
  MMETSP1325-20131115|8563_1 254 SLVDLDLSDNDIG 266
                 7999******985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1459.21
//
Query:       MMETSP1325-20131115|8564_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0009   18.7   0.0     0.0014   18.0   0.0    1.3  1  PF07366.7 SnoaL-like polyketide cyclase


Domain annotation for each model (and alignments):
>> PF07366.7  SnoaL-like polyketide cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.1e-07    0.0014      49      94 ..     153     201 ..     119     215 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 1.1e-07
   PF07366.7  49 elfkafPDlkvevedlvaeg...dkvaarltftGthtgeflGipptGkk 94 
                 +l++afPD++ +++   ++     +v  + ++t+th+g ++G+ppt + 
  MMETSP1325-20131115|8564_1 153 DLLAAFPDMNNRYHAFRVDPfepNRVWFQTRATATHSGSLMGQPPTDRV 201
                 6899*****997777776443339**********************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.32s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1457.78
//
Query:       MMETSP1325-20131115|8568_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.60
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|8566_1  [L=346]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-93  311.1  10.7    9.1e-93  310.6   7.4    1.2  1  PF00262.13 Calreticulin family


Domain annotation for each model (and alignments):
>> PF00262.13  Calreticulin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.6   7.4   6.7e-97   9.1e-93      32     367 .]       4     297 ..       1     297 [. 0.92

  Alignments for each domain:
  == domain 1    score: 310.6 bits;  conditional E-value: 6.7e-97
  PF00262.13  32 kGkwkveegkkykg..lekdkgLvlkskakhyaisaklekpisnkkkdLvvqYevklq..qklecggayiKLlskesdqeeefssetpyeimFGpdkcgsenk.vhfilrkknpktkekeekhlkkkpisr...kddklthlYtLiikpdntfeiriDgesvkegslledfepplnppkeIkdpedkKPedWddrekipDpeakkpedwdekepetipdpeavkpedwdedepeyIpDpeakkPedwdeeedgeweapliknpkcekkgcgkwkppliknpkYkgkwkppeikNPnYkgkWkprkipnpdytedkeplveepigaigfelwsvksdilfdnili 367
                  G+w  ++g++ ++  +++ +g+ ++++ +h+aisak++k+  +++k+Lvvq++vk++  +   cgg+yiKL++k  +q+ ++ ++++y+imFGpd cg++ + +h+i+       ++k+e+ lk+ +i+     +++++hlYtL+++ d t+e+++D+ s+ +g+l e++     p+++Ikdp ++KP+dW+d ++i+Dpea+kpe++d                    d+p+ IpDp+ +kP+dwdee dgewe+p+i+np                  +Ykg+w++p+i+NP+Ykg+W++++i+npdy  d    + + + ++gfelw+v+s+++fdn+l+
  MMETSP1325-20131115|8566_1   4 MGTWTQTAGEWFSEgmEAEATGIATTDDMRHHAISAKMDKKAATTDKPLVVQFSVKHEkkDYSFCGGGYIKLHPKGLNQK-KYGGDDEYAIMFGPDLCGYDVSrIHLIF-------NHKGENLLKEDDIKLdydDKNEFSHLYTLVLQTDGTYEVFLDQVSKASGKLSEEWA---FPSEMIKDPAQSKPTDWVDTKMIEDPEAVKPEGYD--------------------DIPAEIPDPDSEKPDDWDEEDDGEWEPPMIDNP------------------EYKGEWEAPMIENPEYKGEWEHPMIANPDYAPDTYAKYTD-LEYVGFELWTVNSGSVFDNVLV 297
                 588988888765431156789*************************************534467***************9.****************************.......67777777777776564444589*********************************...899********************************....................9********************************..................9*******************************99888766.********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.32s 00:00:00.97 Elapsed: 00:00:00.55
# Mc/sec: 1507.53
//
Query:       MMETSP1325-20131115|8572_1  [L=281]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-10   40.5   2.4    2.2e-10   39.9   1.7    1.3  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
      2e-06   27.3   2.0    3.4e-06   26.6   1.4    1.3  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    1.1e-05   24.9   3.2      2e-05   24.1   2.2    1.4  1  PF13639.1  Ring finger domain
     0.0016   17.9   3.0     0.0043   16.5   2.1    1.7  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.089   12.1   5.5       0.28   10.5   3.8    1.7  2  PF12240.3  Angiomotin C terminal


Domain annotation for each model (and alignments):
>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   1.7   8.1e-14   2.2e-10       2      50 .]     224     276 ..     223     276 .. 0.87

  Alignments for each domain:
  == domain 1    score: 39.9 bits;  conditional E-value: 8.1e-14
   PF13920.1   2 kktCvvCler..eadvlllp..CgHlclCeeCaerllkrkkkCpiCrspiesv 50 
                 k +C vC+e+    +v+l++   gH+ +C++Ca +l+++k+ Cp+C  pie+v
  MMETSP1325-20131115|8572_1 224 KGECAVCFEEmvGDEVILVHgdTGHQSTCSSCAAKLVEMKQPCPVCALPIERV 276
                 579******94445788887558***************************986 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   1.4   1.2e-09   3.4e-06       3      44 ..     225     269 ..     223     270 .. 0.84

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 1.2e-09
   PF13923.1   3 fsCpiCleelen...pviltpCgHl.yCkkCieqwlekskkkCPiC 44 
                  +C +C+ee+      +++   gH  +C++C+ +++e  k+ CP+C
  MMETSP1325-20131115|8572_1 225 GECAVCFEEMVGdevILVHGDTGHQsTCSSCAAKLVEM-KQPCPVC 269
                 69********7765555566789*55************.******* PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   2.2   7.2e-09     2e-05       2      43 ..     226     269 ..     225     272 .. 0.83

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 7.2e-09
   PF13639.1   2 eCaiCldelsegeevvrlp..CgHv.fHeeCldewlrssnsCPlC 43 
                 eCa+C++e+  g+ev+  +   gH   +++C ++++++++ CP+C
  MMETSP1325-20131115|8572_1 226 ECAVCFEEMV-GDEVILVHgdTGHQsTCSSCAAKLVEMKQPCPVC 269
                 9********7.667765542678865******************* PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   2.1   1.6e-06    0.0043       1      41 []     227     269 ..     227     269 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.6e-06
                 -TTTSSS-SSEE....BSCTS-E.E-CHHHHHHHCST-----TTT CS
  PF00097.20   1 CpiCleeakepn...elleCkHs.fCskCirkilksrkkvkCPlC 41 
                 C++C+ee++         + +H+  Cs+C  k+++  +k++CP+C
  MMETSP1325-20131115|8572_1 227 CAVCFEEMVGDEvilVHGDTGHQsTCSSCAAKLVE--MKQPCPVC 269
                 999999999887666455679999***********..99****** PP

>> PF12240.3  Angiomotin C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       0.5   1.4e+03      94     120 ..      15      41 ..      11      52 .. 0.61
   2 ?   10.5   3.8    0.0001      0.28      13      69 ..     109     160 ..     102     163 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.5
   PF12240.3  94 RqfAldaaataaaqrdttiinhspqes 120
                 R +  da   +a+qr+ +  + s + s
  MMETSP1325-20131115|8572_1  15 RSVGEDALTLVAQQRELSGSASSGTGS 41 
                 666666666677777665444444444 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.0001
   PF12240.3  13 aqLqaacEkREqlErrLRtrleqelkslraqqrqaqssgassssynasaLkeqlREk 69 
                   L + cE  E++  rLR  le+e   lr+   +aq+++    + na+ L + lRE 
  MMETSP1325-20131115|8572_1 109 LALESCCEAQEAVVARLREALERET-LLRK---EAQAEARVNAQ-NAEGLLQMLRED 160
                 5799********************8.4553...44444433333.778999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       504  (0.0368637); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.37s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1346.75
//
Query:       MMETSP1325-20131115|8576_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-10   39.5   3.8    3.3e-10   39.5   2.7    1.6  2  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   2.7   2.4e-14   3.3e-10       1      31 []       8      37 ..       8      37 .. 0.85
   2 ?   -2.4   0.1      0.29     4e+03       5      10 ..      71      76 ..      69      79 .. 0.68

  Alignments for each domain:
  == domain 1    score: 39.5 bits;  conditional E-value: 2.4e-14
                ---SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  1 lppgWeersddddGrvYYyNheTgetqWekP 31
                +pp+W+e +  +dGr+YY+N+ T et+We P
  MMETSP1325-20131115|8576_1  8 PPPPWVEIT-GEDGRKYYHNTVTDETSWEMP 37
                4888*9856.445****************99 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 0.29
                EEE.E. CS
  PF00397.21  5 Weersd 10
                W ++++
  MMETSP1325-20131115|8576_1 71 WSHYDT 76
                988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 549.17
//
Query:       MMETSP1325-20131115|8578_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   13.8   0.9      0.035   13.4   0.6    1.2  1  PF09613.5  Bacterial type III secretion protein (HrpB1_HrpK)


Domain annotation for each model (and alignments):
>> PF09613.5  Bacterial type III secretion protein (HrpB1_HrpK)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.6   2.5e-06     0.035      78     155 ..      18     106 ..       9     119 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.5e-06
   PF09613.5  78 plakALlalCLkalqDpeWre...eAeevleegadeealvLvkaLlareellkavaa.......aaaasaeaaaetsea.dssdalatm 155
                 + a +L+alCL++ q  +W +   e  +++ ++a+  + +L++ L  ++ ++ +v+        a +a+a+aaa +++a + sd+l+++
  MMETSP1325-20131115|8578_1  18 GRALGLVALCLSFSQGHSWSKvfgEQPSAVPAQASTPVSALGAPLVTAASMIRGVKRrlqeglpALPADASAAAMAASAnAASDVLNSS 106
                 567799*************9822234568888999999*****************999****995555555555444443456666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 624.05
//
Query:       MMETSP1325-20131115|8579_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|8573_1  [L=538]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-28  100.2   0.0    1.7e-28   99.5   0.0    1.3  1  PF04811.10 Sec23/Sec24 trunk domain
    1.8e-20   73.0   0.0    3.2e-20   72.3   0.0    1.4  1  PF08033.7  Sec23/Sec24 beta-sandwich domain
    2.2e-16   59.0   0.3      4e-15   54.9   0.2    2.3  1  PF04815.10 Sec23/Sec24 helical domain
    4.3e-06   26.2   0.0    1.1e-05   24.8   0.0    1.7  1  PF00626.17 Gelsolin repeat


Domain annotation for each model (and alignments):
>> PF04811.10  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.5   0.0   4.9e-32   1.7e-28     134     242 ..       3     109 ..       1     110 [. 0.95

  Alignments for each domain:
  == domain 1    score: 99.5 bits;  conditional E-value: 4.9e-32
                 S-EEEEEEE-S------.--S-SSTTS-CCCHHTT.-TTHHCHCHHHHHHHHHHCCCT-EEEEEEE-SC---CTTCHHHHHCC---EEEETTTT-HHHHHHHHHHHHHH CS
  PF04811.10 134 tggkiivfagslptvgaggklksredeslldidkekaklvkkadkfYkkLakecvkqgisvDlFlfsldyvdlaelkqlaeltgGqvvlydsFsaekdtsklkqdlkrl 242
                 +ggk++vf + lp+vg    lk+re+++ l++dke+ +l ++++ +Yk+ a e++  +i+vDlFlfs++y+d+a+l++l+++t+G++++y+ F+a++d+ k++++lkr 
  MMETSP1325-20131115|8573_1   3 IGGKMVVFLSNLPSVGE-ARLKHRENPRALGSDKEHVMLNPSEE-WYKTKAIEFSRFQICVDLFLFSSQYTDVATLSSLPKYTAGTLQYYPAFHASRDGVKFQTELKRC 109
                 69***************.*****************777777776.**************************************************************96 PP

>> PF08033.7  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.0   9.2e-24   3.2e-20       1      96 []     115     199 ..     115     199 .. 0.98

  Alignments for each domain:
  == domain 1    score: 72.3 bits;  conditional E-value: 9.2e-24
                 EE-EEEEEEE-TTEEEEEEB---EEST-B-SS----TS-SEEEESCE-TT--EEEEEEESS-TTS-SEEEEEEEEEEE-----EEEEEEEEEEEEE CS
   PF08033.7   1 gfnatlevrtSkelkvsgliGncvslsnvsekeiGeggtsewklcsldpdstlavyfdideklqsgkqayiQfatlYthssgerrlRVttvslpva 96 
                 gf+a+++vr++++l++ +++Gn++ +          +++  ++l++++pd+++a+ + +d+ + +++ + +Q+a+lYt+s+gerr+RV+t+++pv+
  MMETSP1325-20131115|8573_1 115 GFEAVMRVRCTRGLRIANFYGNFFIRG---------TDL--LALPNCHPDNSFAFDIVHDDAVLATNLVSVQAALLYTTSNGERRIRVHTMAIPVS 199
                 79************************9.........999..*******************99*******************************985 PP

>> PF04815.10  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.2   1.2e-18     4e-15       2     103 .]     212     332 ..     211     332 .. 0.91

  Alignments for each domain:
  == domain 1    score: 54.9 bits;  conditional E-value: 1.2e-18
  PF04815.10   2 eAvavllarkaieklltsslkdvrkaldkklvdilaayr...kyvkgssss...............gqlrlpeslkllPlyilaLlKspalrv.fnvspDerayarhlllsldvenllimi 103
                 +++ +++ar+a++ +l+s+l+ +r +l++++vd+++  +   ++  g++ +                +  lpe+l+llPly+ aL Ks ++r+  +++pD+raya+++l++++  ++ ++i
  MMETSP1325-20131115|8573_1 212 DCLSNIMARQALDVALKSGLEAARHKLQTACVDMVRGSQpggQMAPGMHGQpygqppmgaaqqqqqAPPALPEALQLLPLYTMALQKSIVFRGgIDIRPDDRAYAMMRLNTMPAGESRYFI 332
                 78999*****************************9877655477777777799*********98877789*******************************************99987766 PP

>> PF00626.17  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   3.2e-09   1.1e-05       2      54 ..     366     426 ..     365     467 .. 0.77

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 3.2e-09
                 SEEEEEECSSGGGEBTTSEEEEEESSEEEEEEH--..SHHHHHHHHHHHHHHHH......H CS
  PF00626.17   2 svlppvvplsqsslesgdvyLLdtgftiylWiGkg..ssqeeknfaadlaaeld......s 54 
                 ++lpp+ +ls++ l+s++v+ L +  ++ +WiG+   ++ ++ +f+  +  e+d       
  MMETSP1325-20131115|8573_1 366 VTLPPMQNLSADRLQSDGVFMLENSLECVVWIGRAasPQVLQALFGIPSLDEVDfntvalL 426
                 689********************************88888889888888777775555551 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.88u 0.34s 00:00:01.22 Elapsed: 00:00:00.53
# Mc/sec: 2432.53
//
Query:       MMETSP1325-20131115|8580_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|8581_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-08   32.1   0.0      9e-08   31.5   0.0    1.4  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    0.00019   21.2   0.0    0.00027   20.7   0.0    1.2  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
     0.0012   18.5   0.0     0.0018   17.9   0.0    1.3  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.063   13.5   0.1      0.089   13.0   0.1    1.2  1  PF13011.1  leucine-zipper of insertion element IS481


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   2.6e-11     9e-08      32      70 .]       3      41 ..       1      41 [. 0.91

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 2.6e-11
                ESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBEE CS
  PF00076.17 32 rdetgrskgfafVeFeseedaekAlealngkklggrelk 70
                +  tg +kgf+fV+F  + +a++Al++l+g++l+gr ++
  MMETSP1325-20131115|8581_1  3 NRHTGLPKGFGFVRFCMPISAASALDSLDGRELNGRAVR 41
                33799*******************************975 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   7.9e-08   0.00027      33      69 .]       3      41 ..       1      41 [. 0.92

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 7.9e-08
   PF14259.1 33 nkd.grgrgfAfvefeseedAqkalkkln.lvlkgrtir 69
                n++ g ++gf+fv f+ + +A  al+ l+   l+gr +r
  MMETSP1325-20131115|8581_1  3 NRHtGLPKGFGFVRFCMPISAASALDSLDgRELNGRAVR 41
                6677************************99******997 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   5.2e-07    0.0018      20      54 ..       6      43 ..       1      44 [. 0.88

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 5.2e-07
   PF13893.1 20 k...ggqAfvefdtveaArkakeylngvklygktLkve 54
                    +g++fv f  + +A  a+ +l+g+ l+g+ ++v+
  MMETSP1325-20131115|8581_1  6 TglpKGFGFVRFCMPISAASALDSLDGRELNGRAVRVN 43
                25667****************************99996 PP

>> PF13011.1  leucine-zipper of insertion element IS481
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   2.6e-05     0.089      11      35 ..      35      59 ..      31      66 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.6e-05
   PF13011.1 11 llGrvllvrrvvedrrtvaqvarel 35
                l Gr++ v+ vve+  tva++ re+
  MMETSP1325-20131115|8581_1 35 LNGRAVRVNAVVEQASTVAKAVREA 59
                78*******************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|8575_1  [L=795]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-76  256.2   0.8    8.6e-75  251.5   0.6    2.7  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.5   0.6   6.3e-79   8.6e-75       1     413 [.     131     646 ..     131     648 .. 0.87

  Alignments for each domain:
  == domain 1    score: 251.5 bits;  conditional E-value: 6.3e-79
                 EHHHHHHHHHHHHHHHHH----TT-E...............EEEE-SSSHHHHHHHHHHHH---EEEE--TTS-HHHHHHHHHHHTESEEEEESBT-CCCHHHHHHHHHHHCTTCTT...ECC.........S-E.ECCCCCCECSCCGGGTSTSS-----BTTTSEEEEEEE-------EEEEEEHHHHHHHHHHHHHCHT-TTTS.....EEEEES-TTCCHHCTTTHHHHTTT-EEE....................EESSCCTT-HHHHHHHHHHCT-SEEE--HHHHHHHHHHCHC........................................CCTTTTT--EEEE-----THHHHHHHHHHTT.SEEEEEE--CGGSSESEECCS-HHH.CCH---EBSTTTEEEEEBSTT.-BEE-S--................--EEEESTTS--B-TT-HHHHHHHBCCSTTEEE---EEEE-TT--EEEE--GGGEEE--.--EEEHHHHHHHHHTSTTE CS
  PF00501.23   1 TYreldervnrlaagLrklGvkpgdr...............VaillpnspewviaflaclkaGavyvplyptlpaerlayilndseakvlitddelltklleaaskelakekliivr...tdk.........eed.svgeeellleleelkkesteapkepldpddlayiiyTSGtTGkPKGVmlthrnllalvagiaervgltpdd.....rvlsllplhfdgsilellaplllGatvv....................lvspedlkdpalllddiekykvtvlalvptvlelllkaiek........................................kkldlsslrlilsggeplspellerlreafggirivngYGltEttgvvtvslpgdeetkpgsiGrplpgvevkivdeeg.kevppgev................GEllirgpgvakGYlkdpeltaeafdedgwlyrTGDlgrldedGyleiiGRkkdqikir.GeniepgeiEsallehpgv 413
                 +Y+e+ erv+ +++gLr+lG +                     i+ +++++w  a++++++++ v+++ y+tl+  ++ +++n+++++v++++  +l+k+++aa + ++ +++++++   t +         ++     +  ++      k+ +++  + p++p  +a+++yTSG+TGkPKGVm+ h++++a+v+gi   +  t+++     ++l +lp ++++++++ la++ +G++v                     l++     dp      i ++k+t++a+vp +++ + k+ e+                                         k   +++ l ++gg p+s e++ ++r a+ ++++++gY ltEtt++ +++ p+d+  + g +G pl+++e+++    + +      +                GE+lirg+ v  GY+k+pe+tae fd+dgw ++TGD+g++++dG+l+i++R+k+++k++ Ge+i+ +  Esa +++ +v
  MMETSP1325-20131115|8575_1 131   646
                 7999999999999999999986422122233344444444599**************************************************************9999988888777752.157888877633344444555555555555666666777788*********************************99999999988999*****************************99999999999999999997554444..4999999999*********************99**************************************99888888899999******************.6************************..9**************9665553332222.22444557899999999******************************.***************************66***********99877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (795 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.16u 0.37s 00:00:01.52 Elapsed: 00:00:00.62
# Mc/sec: 3072.75
//
Query:       MMETSP1325-20131115|8582_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-12   46.8   0.0    2.3e-09   36.1   0.0    2.1  2  PF05783.6 Dynein light intermediate chain (DLIC)


Domain annotation for each model (and alignments):
>> PF05783.6  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   1.7e-13   2.3e-09     244     334 ..      13     110 ..       9     119 .. 0.79
   2 !    8.5   0.3   3.9e-05      0.54     387     429 ..     156     198 ..     144     199 .] 0.68

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 1.7e-13
   PF05783.6 244 fiqshirrfclqyGaally..tsvkeeknldllykylvhkiy..glpfrtpalvve...kdavliPaGWdnekkiailhenfqtvkaedayedvivkP 334
                 f+q ++rrf l+yG al y  +sv e   + +ly+yl h+iy  ++p+r    + e   ++a ++P+G d++        ++++  a+  ++ vi+ P
  MMETSP1325-20131115|8582_1  13 FVQLYLRRFLLKYGGALAYvqASVTEAPTCPVLYQYLLHRIYpgQFPYRPEFDLDEgraRNAYFMPSGADSRALQEQHQGEITAWGADVGFDAVIETP 110
                 9****************995569*******************55577776666665444789999999998776666666666666777777776666 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 3.9e-05
   PF05783.6 387 nrsapatvasvspqssvkkidpnlkaaaaseGvlanffnslls 429
                 ++ +  ++a++s+  +  k      a+ as   +anffnsll+
  MMETSP1325-20131115|8582_1 156 SKPGNVAPAATSAAPAGAKAGETKGAGDASKEDIANFFNSLLT 198
                 3445555666666666667666667778888889*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 993.49
//
Query:       MMETSP1325-20131115|8583_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-21   77.1   0.0    1.8e-21   76.5   0.0    1.3  1  PF00005.22 ABC transporter
    4.2e-08   32.5   0.4    3.4e-06   26.3   0.0    2.0  2  PF02463.14 RecF/RecN/SMC N terminal domain
     0.0008   19.3   0.0        0.7    9.6   0.0    2.2  2  PF13304.1  AAA domain
     0.0056   16.4   0.6      0.061   13.1   0.4    2.3  1  PF13558.1  Putative exonuclease SbcCD, C subunit
  ------ inclusion threshold ------
      0.013   14.6   0.0      0.019   14.0   0.0    1.3  1  PF03193.11 Protein of unknown function, DUF258
      0.014   13.8   0.1       0.02   13.3   0.1    1.2  1  PF09818.4  Predicted ATPase of the ABC class
       0.02   14.2   0.1      0.043   13.2   0.0    1.5  1  PF13555.1  P-loop containing region of AAA domain
      0.043   13.8   1.8       0.33   11.0   1.3    2.1  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.083   12.8   0.3       0.33   10.9   0.2    1.9  1  PF13401.1  AAA domain
       0.17   12.1   1.6       0.48   10.6   1.1    1.9  1  PF13191.1  AAA ATPase domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.5   0.0   1.3e-24   1.8e-21       1     118 []     109     233 ..     109     233 .. 0.91

  Alignments for each domain:
  == domain 1    score: 76.5 bits;  conditional E-value: 1.3e-24
                 HHHHHHHTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--.........----------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk.........srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 S+++ l  + ++pt+g + +d  + d ++ ++++lr  +g ++q+p lf   t+ en++++k+ + t++++ +++++  +d              +r+++LSgGq+qr+a+Ara++k+p++llLDE+t+
  MMETSP1325-20131115|8583_1 109 SSVISLVERFYSPTNGGVFID--GVDASELNVQWLReqVGLVAQEPVLF-ATTIMENIMYGKKGA-TEEEAIAAAKMASCDFIEGFpdkmqtrvgDRGTQLSGGQRQRIAIARAIIKDPQILLLDEATS 233
                 88999****************..56789999******************.*************99.89999888888887764444556999***********************************96 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.2      0.01        14      25      42 ..      96     113 ..      82     119 .. 0.76
   2 !   26.3   0.0   2.5e-09   3.4e-06     110     213 ..     125     279 ..     113     284 .. 0.84

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.01
                 SEEEE--------HHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
  PF02463.14  25 sftaivGpNGSGKsnvld 42 
                 +  a+vG+ G GKs+v+ 
  MMETSP1325-20131115|8583_1  96 QTVALVGESGGGKSSVIS 113
                 35689**********985 PP

  == domain 2    score: 26.3 bits;  conditional E-value: 2.5e-09
                 EEEE---EE-HHHHHHHHHCTT--TT.....................................................G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHH..HH-BTBEEEEE-S-HHHHTT-SEEE--EE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.....................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 110 eykingkevtkkevaellesagiske.....................................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellk..eksknaQfivislreemlekadklvgvtk 213
                  ++i+g ++++ +v+ l e++g+  +                                                     +LSgG+++ +a+a   A   +k   + llDe  +aLD +  ++v + l+   +sk+   iv+++r +++++ad +  v+ 
  MMETSP1325-20131115|8583_1 125 GVFIDGVDASELNVQWLREQVGLVAQepvlfattimenimygkkgateeeaiaaakmascdfiegfpdkmqtrvgdrgtQLSGGQRQRIAIAR--A--IIKDPQILLLDEATSALDSESERIVQQTLDklVASKKRTTIVVAHRLSTIKNADVIAVVYD 279
                 5678888888888888888888888888888888888899999999999999999999999999999999999999999*******9888764..3..456667899********************9444688999***************9988875 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0022         3       3      25 ..      99     123 ..      97     143 .. 0.78
   2 !    9.6   0.0   0.00051       0.7     236     274 ..     204     239 ..     196     263 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0022
   PF13304.1   3 viiGpNgsGKSnlLkaldflfr..d 25 
                 +++G+ g GKS++++  + +++  +
  MMETSP1325-20131115|8583_1  99 ALVGESGGGKSSVISLVERFYSptN 123
                 79***************99987653 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00051
   PF13304.1 236 dlSdGtkrllalltallsalekgsvlliDEpEngLHPkl 274
                 +lS G+++ +a++ a++ ++    +ll+DE  + L+ + 
  MMETSP1325-20131115|8583_1 204 QLSGGQRQRIAIARAIIKDP---QILLLDEATSALDSES 239
                 78******************...9*******99998765 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.4   4.4e-05     0.061      23      88 ..     195     247 ..     183     249 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.4e-05
   PF13558.1  23 ekelsrrtgtlSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEAFsklDeeniasllell 88 
                 ++++ +r  +lSGG++q         A+a ++ +       +++++LDEA+s lD+e+ + + ++l
  MMETSP1325-20131115|8583_1 195 QTRVGDRGTQLSGGQRQ-------RIAIARAIIK------DPQILLLDEATSALDSESERIVQQTL 247
                 55566667777777773.......3344455554......589**************988776666 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.4e-05     0.019      34      56 ..      94     116 ..      81     181 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.4e-05
                 TTSBEEEE-------HHHHHHH- CS
  PF03193.11  34 kdktsvlvGqSGvGKSsLinall 56 
                 +++t++lvG+SG GKSs+i  ++
  MMETSP1325-20131115|8583_1  94 AGQTVALVGESGGGKSSVISLVE 116
                 359***************98765 PP

>> PF09818.4  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   1.4e-05      0.02     304     354 ..     185     236 ..     168     285 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.4e-05
   PF09818.4 304 pFinnLPegkdtt.efstedASGStsqAanimealeagakllLiDEDtsAtN 354
                  Fi+  P +++t+     ++ SG   q  +i++a+    ++lL+DE tsA  
  MMETSP1325-20131115|8583_1 185 DFIEGFPDKMQTRvGDRGTQLSGGQRQRIAIARAIIKDPQILLLDEATSALD 236
                 6************76777889*****************************64 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.1e-05     0.043      17      40 ..      90     112 ..      84     123 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.1e-05
   PF13555.1  17 veidpkgkntlltGasGsGKSTll 40 
                 ++++ +g++++l+G+sG GKS+++
  MMETSP1325-20131115|8583_1  90 LKVE-AGQTVALVGESGGGKSSVI 112
                 5554.6789************997 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.3   0.00024      0.33      37     118 ..     175     271 ..      98     282 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00024
                 S...........................T-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HH CS
  PF00004.24  37 k...........................yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpa 118
                                             ++  + ++ r  + +a  k  p il++DE+ +   s+       +er+v+q l +l   kk+    + i++++r +++++a
  MMETSP1325-20131115|8583_1 175 AiaaakmascdfiegfpdkmqtrvgdrgTQLSGGQRQRIAIARAIIKD-PQILLLDEATSALDSE-------SERIVQQTLDKLVASKKR----TTIVVAHRLSTIKNA 271
                 055555555555555555555555555555556667777777777776.9***********9999.......788888888888777773....678888888888777 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00024      0.33       6     102 ..      97     245 ..      92     264 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00024
   PF13401.1   6 ilvvtGesGvGKTtllrrlarqldeeaeaae.............karvvfveapast...spkellqkllsalglpakg...................................rltteellealqealrrrrt............rlliiDEaqr.L...s....ee 102
                  ++++GesG GK+ ++  + r +    ++++             + + ++ ++       +p  +++++ +++ +++kg                                       ++             +            ++l++DEa   L   s    ++
  MMETSP1325-20131115|8583_1  97 TVALVGESGGGKSSVISLVERFY----SPTNggvfidgvdaselNVQWLREQVG--LvaqEPVLFATTIMENIMYGKKGateeeaiaaakmascdfiegfpdkmqtrvgdrgtqLSGGQR-------------QriaiaraiikdpQILLLDEATSaLdseSerivQQ 245
                 6799************9999987....344456777777666443333322222..2335677778888888888777788888888888888888888876665555543333222222.............23333333445556999999988664331333333 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.1   0.00035      0.48      19      65 ..      92     132 ..      85     261 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00035
   PF13191.1  19 vsegsplllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn 65 
                 v +g+  + ++G+sG GKSs++       + + +  + g+++  + +
  MMETSP1325-20131115|8583_1  92 VEAGQ-TVALVGESGGGKSSVISL-----VERFYSPTNGGVFIDGVD 132
                 66777.899*************99.....666666666666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       485  (0.035474); expected 273.4 (0.02)
Passed bias filter:                      450  (0.032914); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.71u 0.41s 00:00:01.11 Elapsed: 00:00:00.55
# Mc/sec: 1320.17
//
Query:       MMETSP1325-20131115|8587_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-13   49.8   0.1    1.8e-06   27.4   0.0    3.1  3  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.8e-07     0.008      17      39 .]       2      24 ..       1      24 [. 0.97
   2 !    3.2   0.0    0.0057        77      10      39 .]      37      64 ..      29      64 .. 0.76
   3 !   27.4   0.0   1.3e-10   1.8e-06       2      33 ..      69     100 ..      68     101 .] 0.94

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 5.8e-07
                EEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27 17 vafspdgpllasgSrDgtirlWd 39
                v+f+p+ ++++ g++D+++rl+d
  MMETSP1325-20131115|8587_1  2 VKFAPSTNVVLAGCWDSKLRLYD 24
                89*******************98 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.0057
                SSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27 10 HtspVtcvafspdgpllasgSrDgtirlWd 39
                  +p+ +++f ++ + +  g + +t+r++d
  MMETSP1325-20131115|8587_1 37 K-GPCLDCSFLDNKNAVGGGLY-KTVRVFD 64
                4.88999999999777777777.9999987 PP

  == domain 3    score: 27.4 bits;  conditional E-value: 1.3e-10
                 EEEEEEESSSSSEEEEEEESSSTEEEEEETTS CS
  PF00400.27   2 eckatlrgHtspVtcvafspdgpllasgSrDg 33 
                  +++tl +H+++V+c+ +sp + ll+sg++D+
  MMETSP1325-20131115|8587_1  69 LPTSTLGEHEGAVRCLEYSPYRELLFSGGWDS 100
                 6899***************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|8584_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.21   11.6   0.7       0.31   11.0   0.1    1.6  2  PF03103.12 Domain of unknown function (DUF243)


Domain annotation for each model (and alignments):
>> PF03103.12  Domain of unknown function (DUF243)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0      0.87   1.2e+04      52      62 ..      11      21 ..       5      23 .. 0.56
   2 ?   11.0   0.1   2.3e-05      0.31      31      82 ..     106     157 ..      76     163 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 0.87
  PF03103.12 52 lakaaneektv 62
                +a+ ++ee t+
  MMETSP1325-20131115|8584_1 11 QAQGQTEEMTA 21
                44555666665 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 2.3e-05
  PF03103.12  31 knykvvFikaPeeeaekaalalakaaneektviYVLskkadeeelakklata 82 
                 +   vv +kaP++++ +  +a ++++++   +i  L+k+a e+++ak+l+ +
  MMETSP1325-20131115|8584_1 106 EREFVVSMKAPKHSMLTHLVAFEEQQRDMLHAIEALNKRARETAIAKELELN 157
                 3445999***************************************999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.62
# Mc/sec: 834.86
//
Query:       MMETSP1325-20131115|8589_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.057   12.7   0.0       0.06   12.7   0.0    1.0  1  PF02124.10 Marek's disease glycoprotein A


Domain annotation for each model (and alignments):
>> PF02124.10  Marek's disease glycoprotein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.4e-06      0.06      32      72 ..       7      48 ..       3      54 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.4e-06
  PF02124.10 32 dGlftrvsvvtlaaeekdsp.ppslrCevtWtrdsvsetrfs 72
                 G++ r+sv++la++e+++p + +l+  v W  d ++++r+ 
  MMETSP1325-20131115|8589_1  7 LGVVARTSVLQLASAETADPpAHKLKLRVLWEGDLGAKRRVR 48
                599*********988877773579**********99999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        82  (0.00599766); expected 273.4 (0.02)
Passed bias filter:                       74  (0.00541252); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|8588_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 373.83
//
Query:       MMETSP1325-20131115|8591_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 577.94
//
Query:       MMETSP1325-20131115|8586_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-12   46.4   0.0    5.5e-12   45.6   0.0    1.4  1  PF02146.12 Sir2 family


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.0     4e-16   5.5e-12       1     151 [.      81     253 ..      81     269 .. 0.78

  Alignments for each domain:
  == domain 1    score: 45.6 bits;  conditional E-value: 4e-16
                 -----TT-------.-----TTTS-HHH.....HTCHHHHHC-HHHHHH...HHHHCCCCCCT..S---HHHHHHHHHHH---EEE.EEE--SS-HHHH......----SEEE----TTEEEETTTS-EEEECCGGTCCCHH--...............B-ST---BEEESS--B-- CS
  PF02146.12   1 GAGiStesGipdfRskkeGlyaklakee.....laspealfsnkllkeepevfynlarellpkaeakpnaaHkflkklekkgkllr.liTQNidnLekk......aGskkvvelHGslakakcvkCeakesgeelkeeieaekve..............ecekcgkllkpdvvfFGe 151
                 GAG+ ++sG+ +fR ++ G++  l++ +     +++p++++++++l ++   f +++++ ++  +  p +  k+l+ +  + k  +  +T Nid+  ++       G   v+e+HG l++++c++ e  ++g+   +  +   ++               c++c ++ +p+v +F +
  MMETSP1325-20131115|8586_1  81 GAGMGVDSGLGTFRGRNAGVWPPLKSLGldfseMSTPSHFEKDPRLAWA---FWHFRHQAYTR-HSRPHKGYKLLASWAGRAKYGCfSFTSNIDGHWERpevglpGGADAVLEVHGALTNLQCSDPECPTHGSIWPTPDNLGGMQvfpgnlakavgdlpICHTCASIARPNVLMFND 253
                 9*********************999988222224455555556666666...99999999987.9*************99887755279*****976652322224666**************99666666665555555444445689************************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1866.64
//
Query:       MMETSP1325-20131115|8594_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       982  (0.0718256); expected 273.4 (0.02)
Passed bias filter:                      856  (0.0626097); expected 273.4 (0.02)
Passed Vit filter:                        74  (0.00541252); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|8593_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-05   22.9   0.0     0.0002   20.9   0.0    1.9  2  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   1.5e-08    0.0002      10      90 ..       2      84 ..       1      85 [. 0.89
   2 ?   -0.9   0.0     0.095   1.3e+03      43      67 ..     139     163 ..     124     182 .. 0.79

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 1.5e-08
                EE-TT-B--EEEEEEE-EEEEEEE-...----EEEEEEE-TTEECSGGGCCSSSB-SSEEEEEEEEEEEEEEHHHHHHHHCC-H CS
  PF00027.24 10 ifkeGdpadslyiilsGkvkvyknd...edgkesilaelgpGdffGelalltgeprsatvvaltdvevlvipredfrelleknp 90
                i ++G+ +d +yi+++G++  y+++   +dg +   ++ +  +f +e  l+ ++p+  +v a++ ve  +++ +++r+ll+++p
  MMETSP1325-20131115|8593_1  2 ITHQGAYNDPFYILVKGECVGYRKSlidGDGST-QCGRWKGFGFWNERVLVFDSPADTSVAAVGFVETHAMNGSEMRNLLRRFP 84
                789***************988876422155554.59*********************************************998 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.095
                 EEE-TTEECSGGGCCSSSB-SSEEE CS
  PF00027.24  43 aelgpGdffGelalltgeprsatvv 67 
                 +  ++G + G +a++ ++p + t +
  MMETSP1325-20131115|8593_1 139 KLAKAGRLAGNIAMIANNPTAETDK 163
                 5678899999999999998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       684  (0.0500293); expected 273.4 (0.02)
Passed bias filter:                      560  (0.0409596); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|8596_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       644  (0.0471036); expected 273.4 (0.02)
Passed bias filter:                      560  (0.0409596); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|8597_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.60
# Mc/sec: 223.66
//
Query:       MMETSP1325-20131115|8598_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 423.19
//
Query:       MMETSP1325-20131115|8600_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-05   22.4   6.7      0.051   13.5   0.5    3.7  4  PF13516.1  Leucine Rich repeat
     0.0021   17.5   3.3      0.085   12.4   0.5    2.3  2  PF12799.2  Leucine Rich repeats (2 copies)
     0.0046   16.6   2.8        7.4    6.9   0.0    3.3  3  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
       0.11   12.1   6.5       0.35   10.5   4.3    1.9  1  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.2   4.1e+03      14      22 ..       2      10 ..       1      12 [. 0.80
   2 !   13.5   0.5   1.5e-05     0.051       1      22 [.      17      38 ..      17      40 .. 0.89
   3 !    5.7   0.3     0.005        17       4      22 ..      49      67 ..      47      72 .. 0.84
   4 ?    4.0   0.0     0.018        60       3      17 ..      76      91 ..      74      99 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.2
   PF13516.1 14 igdeGlsaL 22
                ++d+G  +L
  MMETSP1325-20131115|8600_1  2 LTDDGGRML 10
                89**98877 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 1.5e-05
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaL 22
                +++L+ L+Ls+N +g+e   aL
  MMETSP1325-20131115|8600_1 17 NNTLMRLNLSSNSLGSETTGAL 38
                689*************998887 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.005
   PF13516.1  4 LtsLdLsnNqigdeGlsaL 22
                L + dLs N++ ++++ +L
  MMETSP1325-20131115|8600_1 49 LCTVDLSCNNLNSNDVISL 67
                5688*******99998766 PP

  == domain 4    score: 4.0 bits;  conditional E-value: 0.018
   PF13516.1  3 nLtsLdLsnNq.igde 17
                 Lts+dL +N+ +g +
  MMETSP1325-20131115|8600_1 76 ALTSIDLRMNPeVGTD 91
                69********877765 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.1    0.0033        11      20      38 ..      14      32 ..       5      44 .. 0.73
   2 !   12.4   0.5   2.5e-05     0.085       6      35 ..      52      86 ..      49      96 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0033
   PF12799.2 20 lanLpnLktLnLsnNpisd 38
                l + + L  LnLs+N + +
  MMETSP1325-20131115|8600_1 14 LRQNNTLMRLNLSSNSLGS 32
                5666667777777777754 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 2.5e-05
   PF12799.2  6 LdLsnNnIkd.....lppelanLpnLktLnLsnNp 35
                +dLs Nn+ +     l+ ++ n + L++++L  Np
  MMETSP1325-20131115|8600_1 52 VDLSCNNLNSndvisLHSSIENNRALTSIDLRMNP 86
                5666666654444449999************9997 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0022       7.4       2      14 ..      20      32 ..      19      44 .. 0.79
   2 !    6.0   1.1    0.0042        14       4      21 ..      51      73 ..      48      74 .. 0.76
   3 ?    1.0   0.0      0.19   6.3e+02       2      10 ..      77      85 ..      76     102 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0022
                ESEEEETSSBCBC CS
  PF00560.28  2 LeeLdLsgNnlts 14
                L +L+Ls+N+l s
  MMETSP1325-20131115|8600_1 20 LMRLNLSSNSLGS 32
                789*******974 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0042
                EEEETSSBCBC.....HHHHHHH CS
  PF00560.28  4 eLdLsgNnlts.....lppslsn 21
                + dLs+Nnl s     l++s++n
  MMETSP1325-20131115|8600_1 51 TVDLSCNNLNSndvisLHSSIEN 73
                78*******96688777766655 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.19
                ESEEEETSS CS
  PF00560.28  2 LeeLdLsgN 10
                L+++dL+ N
  MMETSP1325-20131115|8600_1 77 LTSIDLRMN 85
                899***999 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.3    0.0001      0.35       2      59 ..      19      85 ..      18      86 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0001
   PF13855.1  2 nLkeLdLsnNrlkvipdgaFkgl.....snLkvLdLsgnnlk...sispe.afkgLpsLreLnLsgN 59
                 L++L+Ls+N+l +  +ga+ +      s L + dLs+nnl+   +is + ++++ ++L++++L+ N
  MMETSP1325-20131115|8600_1 19 TLMRLNLSSNSLGSETTGALMSVfqepeSPLCTVDLSCNNLNsndVISLHsSIENNRALTSIDLRMN 85
                599**********99999999999999999***********655677776369***********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       385  (0.0281597); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|8600_2  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.59
# Mc/sec: 154.34
//
Query:       MMETSP1325-20131115|8601_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-08   32.7   0.0    6.5e-08   32.1   0.0    1.3  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    5.4e-08   32.2   0.0      1e-07   31.3   0.0    1.5  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
     0.0017   18.2   0.1     0.0046   16.8   0.0    1.8  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
     0.0017   17.9  28.3     0.0028   17.2  19.7    1.4  1  PF08648.7  Protein of unknown function (DUF1777)
     0.0023   17.4   4.7     0.0041   16.6   3.3    1.5  1  PF00642.19 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
  ------ inclusion threshold ------
        3.3    6.4  28.9        6.9    5.3  20.0    1.5  1  PF00937.13 Coronavirus nucleocapsid protein


Domain annotation for each model (and alignments):
>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   2.9e-11   6.5e-08       1      56 []      44     103 ..      44     103 .. 0.95

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 2.9e-11
   PF13893.1   1 LyklfskfGkverikifrkk.....ggqAfvefdtveaArkakeylngvklygktLkveys 56 
                 +y+ ++ +G++e++ +++ +      g ++v+f+++e+A+ a+++l g+ + g++L ve+s
  MMETSP1325-20131115|8601_1  44 IYEELASYGRIEECNVCE-NlgdhmVGNVYVKFEDEEDADDALKALFGRFYAGRPLVVEFS 103
                 799*************98.5599999*********************************98 PP

>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   4.6e-11     1e-07      13      69 ..      42      98 ..      41      99 .. 0.95

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 4.6e-11
                HHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17 13 eeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklggrel 69
                ee++e +  +G+ie+++++ +  +   g  +V+Fe+eeda++Al+al g+ + gr+l
  MMETSP1325-20131115|8601_1 42 EEIYEELASYGRIEECNVCENLGDHMVGNVYVKFEDEEDADDALKALFGRFYAGRPL 98
                789999**************9999999***************************987 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0     2e-06    0.0046      13      66 ..      42      96 ..      23      98 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2e-06
   PF14259.1 13 edlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkalkkln.lvlkgr 66
                e++ e +++yg++e++ ++ n       g  +v+fe+eedA+ alk+l      gr
  MMETSP1325-20131115|8601_1 42 EEIYEELASYGRIEECNVCEN-LgDHMVGNVYVKFEDEEDADDALKALFgRFYAGR 96
                678888899**********76.32245888****************9744666665 PP

>> PF08648.7  Protein of unknown function (DUF1777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2  19.7   1.2e-06    0.0028      34      91 ..     149     200 ..     110     212 .. 0.47

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 1.2e-06
   PF08648.7  34 eRereRsrsreRdrarrrsRsrderrsrrsrSprrlksgrersrsrsierrrdRkeer 91 
                 e++r+Rsrs +R +   rsRsr+  r +rsrS++r   +r+rsrsrs +r+ d+++e+
  MMETSP1325-20131115|8601_1 149 EKKRSRSRSDSRSY--SRSRSRSYSR-SRSRSRSR---SRDRSRSRSRDREDDKDKEK 200
                 33333333333333..2222222222.11222222...11222222222222222111 PP

>> PF00642.19  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   3.3   1.8e-06    0.0041       2      25 ..     109     131 ..     108     133 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.8e-06
                 -S---SGGGG----------SS-- CS
  PF00642.19   2 ktelCrffartGtCpyGdrCkFaH 25 
                 ++++Cr f +  +C +G+ C+F+H
  MMETSP1325-20131115|8601_1 109 REARCRQFDE-SHCARGGYCNFMH 131
                 6899******.************* PP

>> PF00937.13  Coronavirus nucleocapsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  20.0     0.003       6.9     155     201 ..     145     193 ..     131     211 .. 0.67

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.003
  PF00937.13 155 gfeveefrgrSrsssrsssrsqsRsssrsksrsnsnkrkqss..qddlv 201
                 + ++e++r rSrs srs srs+sRs srs+srs s++r++s+  + d +
  MMETSP1325-20131115|8601_1 145 KQYAEKKRSRSRSDSRSYSRSRSRSYSRSRSRSRSRSRDRSRsrSRDRE 193
                 4466667999999999999999988888866666666655553233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       941  (0.0688268); expected 273.4 (0.02)
Passed bias filter:                      476  (0.0348157); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.42s 00:00:01.02 Elapsed: 00:00:00.56
# Mc/sec: 911.47
//
Query:       MMETSP1325-20131115|8599_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.6e-06   26.3   0.2    9.2e-06   25.6   0.1    1.3  1  PF13676.1 TIR domain


Domain annotation for each model (and alignments):
>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.1   6.8e-10   9.2e-06       9      84 ..     139     219 ..     135     241 .. 0.80

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 6.8e-10
   PF13676.1   9 drelaealaeaL..eragi.rvfld..r.diapgedwaeeiekalrradvvlvllspaylasdwvrkEleaakelgkpvipv 84 
                 d +l+e++ ++L  e++++ ++ ++  + +    ++w+++  +a ++adv +++ls +yl+s+   +E++a+ ++++ v+ v
  MMETSP1325-20131115|8599_1 139 DVPLVEDIITRLplESRCYyKIKMAnaSpESSLARRWKASWLTAAEAADVAVCVLSSSYLQSRESCEEWRAVSDAKR-VVVV 219
                 66777777777655666666777765555677799***************************************999.6666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.54
# Mc/sec: 1260.31
//
Query:       MMETSP1325-20131115|8602_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.4   0.3        1.1    8.9   0.0    2.9  3  PF14223.1 gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> PF14223.1  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0     0.046   6.2e+02      49      70 ..      77      98 ..      69     106 .. 0.81
   2 ?    8.9   0.0   7.8e-05       1.1      54     104 ..     133     185 ..     128     190 .. 0.75
   3 ?    1.3   0.0     0.018   2.5e+02       6      30 ..     192     216 ..     188     220 .. 0.88

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.046
   PF14223.1 49 rlkeivnklrslGekisdekvv 70
                 ++++v +l++l+++i ++  +
  MMETSP1325-20131115|8602_1 77 TFTQLVMNLAQLNDEIREKVAM 98
                5789999999999999998765 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 7.8e-05
   PF14223.1  54 vnklrslGekisdekvveklLrslpekyeqlvts....ieeskdlstltleelvg 104
                  + lr+lG ++  +k+v ++Lr+ p++ e +  s    +e  k+++   leel+g
  MMETSP1325-20131115|8602_1 133 FEPLRTLGWDLVVKKHVLHVLRAYPDRNEVILYScwltLECVKKSE--HLEELQG 185
                 5679***********************9987643221166666666..6666666 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.018
   PF14223.1   6 iWdaLkkeyegsdrvkearlqtLrk 30 
                 +++ +++++ +++r++ea+ q L+k
  MMETSP1325-20131115|8602_1 192 ALQRIHTRNYTDERIREATDQLLEK 216
                 67789999999**********9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.42s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1124.44
//
Query:       MMETSP1325-20131115|8590_1  [L=835]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-47  160.9   4.3      7e-37  126.4   0.0    2.5  3  PF01885.11 RNA 2'-phosphotransferase, Tpt1 / KptA family
    1.1e-17   64.6   0.0    1.9e-17   63.9   0.0    1.4  1  PF03372.18 Endonuclease/Exonuclease/phosphatase family
  ------ inclusion threshold ------
        1.2    7.7   7.5        2.1    6.9   5.2    1.3  1  PF01698.11 Floricaula / Leafy protein
        1.5    7.5   9.2        2.3    6.9   6.4    1.1  1  PF04111.7  Autophagy protein Apg6
        5.3    5.5  17.3        9.3    4.7  12.0    1.3  1  PF11498.3  Transcriptional activator LAG-3


Domain annotation for each model (and alignments):
>> PF01885.11  RNA 2'-phosphotransferase, Tpt1 / KptA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.6       2.6   7.2e+03      44      65 ..     450     471 ..     436     498 .. 0.55
   2 !   35.9   0.0   1.4e-12   3.9e-09       3      63 ..     579     639 ..     577     641 .. 0.94
   3 !  126.4   0.0   2.6e-40     7e-37      34     182 ..     664     812 ..     655     817 .. 0.92

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 2.6
                 ---TT--HHHH---TTT----- CS
  PF01885.11  44 lkslkvteeeilevVetndkkR 65 
                 l+s++v++ +il+ V + +kk 
  MMETSP1325-20131115|8590_1 450 LHSVSVEARQILTRVVELQKKA 471
                 3444444444444333333333 PP

  == domain 2    score: 35.9 bits;  conditional E-value: 1.4e-12
                 X----HHHHH----SS--------------B-HHHHH-------TT--HHHH---TTT--- CS
  PF01885.11   3 krdvklSkaLsylLRhaaekegLkldseGyvkladllaalklkslkvteeeilevVetndk 63 
                 k+ +++Ska+s +LRh+  + g++ + +Gyvk++dl aa k   +++++ee++++V+ + k
  MMETSP1325-20131115|8590_1 579 KNMMRMSKAMSQILRHGLVDRGIEYRPDGYVKVSDLKAAAKGGLQQIQLEELQTIVKASVK 639
                 56789***************************************************98866 PP

  == domain 3    score: 126.4 bits;  conditional E-value: 2.6e-40
                 -HHHHH-------TT--HHHH---TTT-----EEE-.....---EEE-----S-.--....---...------SEEEE-EEGGGHHHHHH--------SSEEEES-..HHHHHH-------EEEEEEEHHHHHH-----EE-SSSEEEES.. CS
  PF01885.11  34 kladllaalklkslkvteeeilevVetndkkRFelkleekgeylIRAtqGhSiklvea.alleklkleeeelpellvhGTyeealdsilesGLkkmsRnhvhlstg..eekavisGmrrdaevliyidlekalaagikfyvsengvvLteGs 182
                 +l + l +      +++ + + +  ++  k+RF+l  +e + ++IRA+qGh++  ++  +ll+ + +++e   + ++hGTy+++l+si+e GL +msRnh+h+++    +++visGmr++++v iy+++++a++ g++fy+s+ngv+L+ G 
  MMETSP1325-20131115|8590_1 664 RLTHALTHXTHARTHARTHALSRHAQSCTKQRFSLI-REGSTWWIRANQGHTVPGIDPeQLLTPVVDASEL--PCVIHGTYHKFLPSIKEGGLCRMSRNHIHFAAAmpGKDGVISGMRSSCQVTIYVNARAAMELGCRFYRSTNGVILSAGL 812
                 566667777777778899999***************.799*****************99999998888888..9******************************998899****************************************97 PP

>> PF03372.18  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.0   6.9e-21   1.9e-17       1     251 []      34     323 ..      34     323 .. 0.61

  Alignments for each domain:
  == domain 1    score: 63.9 bits;  conditional E-value: 6.9e-21
                 EEEEECE.........................CGTHCHHHHHHHTCG-SEEEEECC-TCHHHHHHCHHCTTT-E..EEE--------SEEEECTEEEEEEESCGCCEEEEEECTTSS-ECGGCEECCTCEEEEEEEEEECTEEEEEEECHHHCTSSTTSHHHHHHHHHHHHHHCCHHHHSEEEE---S--BSSGH.................................TTTBHHHHHSHHCBHBCCHHHHCBTT-C......--SB--TC-TTTCCCHHB....--S--EEBHHHCCCCEEEEECTHHCHS..............SSS CS
  PF03372.18   1 ltwNvlg..................wnarsdrakkldqladllqsedpDvllLQEvdedplsellatglasglg..lagdgkvggggggdalgggglallskypldksirrtfqldgkagiavprlssknkgdvpvrfrggktlalvntHltpgnrlrqrderallaeidkladdsrgspvilaGDfNsrpdspd.................................kgfrenaadflpgdgfddglrallphll......lptspgttdtyekagepa....rlDyilvssgwpalvvsgalllpdrgg..............SDH 251
                 l+wN+l+                  w  r  +      + d+l + +pDv++LQEv+   ++  la+ la++++  l  ++k++g+++       g+a +++++l++ ++  +   ++   +v++l  +           g+ la+vn+Hl  + r  + +  +l + +++l +++ ++ +i++GDfN +++ +                                  +    ++ +++p               +       p++p +  +++++ +p+     lD  ++s+ +  +v + al  +d+                SDH
  MMETSP1325-20131115|8590_1  34 LSWNILAdcylqdydntgksadllsWAIRKTM------IVDELITAQPDVMCLQEVEFTKFDSELAPALAEAGYdgLMQNDKKRGKDH-----PVGVATFWRRSLFALEG-AC---HRSRSMVVVLKELAA--------TGRALAVVNVHLQGDPRACETRVKQLQTSLAELCRKHSHQGLIVCGDFNCPLRASAcgsylafgavvpgvlewgyevpekallipghgySLASVDDLSSAP---------------GergdslDPDNPLDVQSFTFCAHPGrpvdGLDQLWYSPASLQVVACRALFGSDKERldilrgglpnyanpSDH 323
                 69*****9998888877766666666666666......*******************9988888887777775522333333333333.....57*******86663332.22...343344333333333........39*********777666666555566666666666655556***************************999888766666655555554222222222222...............1222333333333334444443333333399999994444444443333333333355555556666666666 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   5.2   0.00078       2.1     150     228 ..     432     515 ..     404     524 .. 0.48

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00078
  PF01698.11 150 seepvqe...eke.aagsggeglgeaelvaaeekkseeekkkaskkkqkrkkk.kelkseededeeeeededeegsgedgeerq 228
                 see+ ++   +ke +a+  ++ + ea+++ ++  + +++ kk ++k+q+++++ k++ ++ ++++++++  ++ ++g++g+er 
  MMETSP1325-20131115|8590_1 432 SEEQLAQlkqQKElKASVLHSVSVEARQILTRVVELQKKAKKLEQKRQQKQQQeKRALQKLEQQQKHQSGAERGQEGSGGRERG 515
                 444443322122212222222222233333333444455555544443333330333344555555556666666777777774 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   6.4   0.00083       2.3      69     137 ..     433     500 ..     412     506 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00083
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04111.7  69 dseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklkklelekelks 137
                 ++ l +Lk+++e + + l+ ++ e  ++   ++elq++++kle++++q+++ ++k  l+kle +++ +s
  MMETSP1325-20131115|8590_1 433 EEQLAQLKQQKELKASVLHSVSVEARQILTRVVELQKKAKKLEQKRQQKQQ-QEKRALQKLEQQQKHQS 500
                 556889*************************************99999875.66778899988887776 PP

>> PF11498.3  Transcriptional activator LAG-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  12.0    0.0034       9.3     314     392 ..     433     517 ..     417     522 .. 0.61

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0034
   PF11498.3 314 pqqiaqlaqqqn.kmrllqqqeqelqr.....ieqqrrqqimqqqqqq.qqqehrrqqmllqqqqqqqqlqqqnqmngggqfatqa 392
                  +q+aql+qq++ k  +l     e ++     +e q++ + ++q++qq qqqe+r  q l  qqq+ q   ++ q  +gg+   q+
  MMETSP1325-20131115|8590_1 433 EEQLAQLKQQKElKASVLHSVSVEARQiltrvVELQKKAKKLEQKRQQkQQQEKRALQKLE-QQQKHQSGAERGQEGSGGRERGQT 517
                 4577999888764777877655554321111268888877777665551556666666655.555555555666666677665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (835 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1975  (0.144456); expected 273.4 (0.02)
Passed bias filter:                      716  (0.0523698); expected 273.4 (0.02)
Passed Vit filter:                       103  (0.00753365); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.73u 0.40s 00:00:02.13 Elapsed: 00:00:00.89
# Mc/sec: 2248.27
//
Query:       MMETSP1325-20131115|8605_1  [L=507]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-09   37.2  15.9     0.0022   17.6   0.1    7.8  8  PF00514.18 Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
       0.01   15.9  10.6        1.2    9.3   0.5    4.2  4  PF13646.1  HEAT repeats


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0     0.096   6.6e+02      16      28 ..      47      60 ..      38      60 .. 0.80
   2 !   15.8   0.2   1.2e-06    0.0083       7      41 .]      63     100 ..      57     100 .. 0.92
   3 !   17.6   0.1   3.2e-07    0.0022      10      41 .]     115     146 ..     107     146 .. 0.89
   4 ?    0.6   0.1     0.073     5e+02      27      40 ..     281     294 ..     278     295 .. 0.90
   5 !    4.4   0.0    0.0045        31       2      35 ..     356     389 ..     355     395 .. 0.85
   6 ?    0.1   0.0       0.1   7.1e+02      13      36 ..     406     429 ..     404     430 .. 0.87
   7 ?    0.6   0.1     0.074     5e+02       9      40 ..     442     482 ..     434     483 .. 0.64
   8 ?   -1.8   0.0      0.42   2.9e+03       1      14 [.     484     497 ..     484     497 .. 0.88

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.096
                HHHHHHC.-SSHHH CS
  PF00514.18 16 pLvqLLk.sgdeev 28
                +Lv++L+ s d++v
  MMETSP1325-20131115|8605_1 47 QLVAMLSsSRDPSV 60
                79*****9999886 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 1.2e-06
                 HHHHCHHHHHHHHHHC...-SSHHHHHHHHHHHHHHHT CS
  PF00514.18   7 avieaGavppLvqLLk...sgdeevqeeAawALsNLaa 41 
                 a++++ ++ + vq+L+    +d  +q++A+ +L+NL++
  MMETSP1325-20131115|8605_1  63 ALRQQSCIAVVVQMLQavpAPDVPTQRAALLVLGNLTR 100
                 799999******************************96 PP

  == domain 3    score: 17.6 bits;  conditional E-value: 3.2e-07
                 HCHHHHHHHHHHC-SSHHHHHHHHHHHHHHHT CS
  PF00514.18  10 eaGavppLvqLLksgdeevqeeAawALsNLaa 41 
                 + G++ + ++LL s d +v+e+Aa++++NL++
  MMETSP1325-20131115|8605_1 115 QTGGLTRALDLLLSSDLGVREQAACVVHNLSS 146
                 5678888899********************96 PP

  == domain 4    score: 0.6 bits;  conditional E-value: 0.073
                 HHHHHHHHHHHHHH CS
  PF00514.18  27 evqeeAawALsNLa 40 
                 e++e A+ AL+ L+
  MMETSP1325-20131115|8605_1 281 EMLECALLALGSLC 294
                 789**********9 PP

  == domain 5    score: 4.4 bits;  conditional E-value: 0.0045
                 HHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHH CS
  PF00514.18   2 penkqavieaGavppLvqLLksgdeevqeeAawA 35 
                  ++ +++  aGa+ + v+ L++gde  +  A+++
  MMETSP1325-20131115|8605_1 356 ADCARLLAGAGALGAVVSRLHHGDEASRASALTT 389
                 6789999*****************9887777766 PP

  == domain 6    score: 0.1 bits;  conditional E-value: 0.1
                 HHHHHHHHHC-SSHHHHHHHHHHH CS
  PF00514.18  13 avppLvqLLksgdeevqeeAawAL 36 
                 +v++  ++L++gd ++++ A+ +L
  MMETSP1325-20131115|8605_1 406 GVDAVAHMLTTGDMRLTTRAVQVL 429
                 89999*********9999998776 PP

  == domain 7    score: 0.6 bits;  conditional E-value: 0.074
                 HHCHHHHHHHHHHC.........-SSHHHHHHHHHHHHHHH CS
  PF00514.18   9 ieaGavppLvqLLk.........sgdeevqeeAawALsNLa 40 
                 i + ++  Lv+LL           ++ +++ + +++L+N a
  MMETSP1325-20131115|8605_1 442 IVSRGLGSLVDLLMvdrhindpsIDSISLVMDVLTTLTNVA 482
                 44677788888888766655555566666677777777765 PP

  == domain 8    score: -1.8 bits;  conditional E-value: 0.42
                 CHHHHHHHHHCHHH CS
  PF00514.18   1 spenkqavieaGav 14 
                 sp++ ++++e G++
  MMETSP1325-20131115|8605_1 484 SPKHAKTLVELGGI 497
                 678999******98 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.5   0.00017       1.2       6      60 ..      75     146 ..      70     156 .. 0.74
   2 ?    1.3   0.0     0.054   3.7e+02      38      76 ..     218     258 ..     190     272 .. 0.67
   3 ?    2.2   0.1     0.029     2e+02      15      58 ..     226     271 ..     215     322 .. 0.54
   4 ?    6.9   0.2   0.00099       6.8       3      65 ..     370     439 ..     362     455 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00017
   PF13646.1   6 aaLek..dpdpevraaaieaLgqlgseea...............lpaLlelLkdsdpevRraAaeaLgklgd 60 
                 + L+    pd  +++aa+ +Lg+l  +e+               l   l+lL +sd  vR++Aa +  +l++
  MMETSP1325-20131115|8605_1  75 QMLQAvpAPDVPTQRAALLVLGNLTRAELgatpdalrqcqqtggLTRALDLLLSSDLGVREQAACVVHNLSS 146
                 4443344899999*********776666666666677777767788888888999******99988888765 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.054
   PF13646.1  38 elLkdsdpevRraAaeaLgklgd..pealpaLlkllddded 76 
                 +++ +s+ ++  +A++ L  +++  ++ ++aL+ + +  ++
  MMETSP1325-20131115|8605_1 218 SFMGSSHRSLSVKAIQLLHVFAScpDSTVQALVHAVAAASP 258
                 56666667777777777776665534557777766554443 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.029
   PF13646.1  15 evraaaieaLg..qlgseealpaLlelLkdsdpevRraAaeaLgkl 58 
                 ++  +ai++L       +++++aL+++    +p+v +  a+ +   
  MMETSP1325-20131115|8605_1 226 SLSVKAIQLLHvfASCPDSTVQALVHAVAAASPMVSQLQAKIIETQ 271
                 4444555555544333445666666666666666554444444433 PP

  == domain 4    score: 6.9 bits;  conditional E-value: 0.00099
   PF13646.1   3 aLlaaLekdpdpevraaaieaLg........qlgseea.....lpaLlelLkdsdpevRraAaeaLgklgdpealp 65 
                 a +++L ++ d+  ra+a+ + +        +     a     ++a+ ++L+  d ++   A+++L + ++ +a +
  MMETSP1325-20131115|8605_1 370 AVVSRL-HHGDEASRASALTTFAtmtagaqpT-----AelasgVDAVAHMLTTGDMRLTTRAVQVLKAASQHQACQ 439
                 567889.99999***********554333222.....344555***********************9987766543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       465  (0.0340111); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.64
# Mc/sec: 1898.36
//
Query:       MMETSP1325-20131115|8607_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   14.9   0.0       0.03   14.7   0.0    1.2  1  PF13637.1 Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   2.2e-06      0.03       8      48 ..       2      45 ..       1      51 [. 0.84

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.2e-06
   PF13637.1  8 aaisgrlelvklLlek.gidinrt..desGntaLhiAalrgnie 48
                aa++g  e++++Ll++ + d  ++  de+G  + + A l g++ 
  MMETSP1325-20131115|8607_1  2 AAMKGKREVAEWLLAHsRLDASHLqpDEDGYLPSDMAQLQGFVA 45
                99*************989**9999999*9*99999986666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|8608_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 256.16
//
Query:       MMETSP1325-20131115|8610_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 948.12
//
Query:       MMETSP1325-20131115|8609_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-23   81.4   0.1      4e-23   81.3   0.0    1.0  1  PF00022.14 Actin


Domain annotation for each model (and alignments):
>> PF00022.14  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   0.0   2.9e-27     4e-23       7      74 ..       2      74 .]       1      74 [] 0.98

  Alignments for each domain:
  == domain 1    score: 81.3 bits;  conditional E-value: 2.9e-27
  PF00022.14  7 vVlDnGssttkaGfagedaPkavipsvvgkprgekvea.....klyvgdealekrpelevrnpvedGvvedwd 74
                +V+DnGs+++kaGfag+daP+av+ps+vg+p++ + ++     ++yvgdea++kr+ l++++p+e+G+v++wd
  MMETSP1325-20131115|8609_1  2 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPKHPGIMVgmdqkDAYVGDEAQSKRGVLTLKYPIEHGIVTNWD 74
                8*********************************9999999*9*****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 377.30
//
Query:       MMETSP1325-20131115|8613_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 622.03
//
Query:       MMETSP1325-20131115|8614_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 891.44
//
Query:       MMETSP1325-20131115|8617_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|8616_1  [L=326]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-53  175.7   1.7    2.8e-18   65.3   0.1    3.0  3  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.0   1.4e-18   1.9e-14       8      95 ..      30     118 ..      25     119 .. 0.91
   2 !   65.3   0.1     2e-22   2.8e-18       2      93 ..     123     217 ..     122     219 .. 0.95
   3 !   55.7   0.0     2e-19   2.7e-15       3      94 ..     227     321 ..     225     323 .. 0.94

  Alignments for each domain:
  == domain 1    score: 52.9 bits;  conditional E-value: 1.4e-18
                 HHH----HHHCCHHHCHHHHHHHHHHH.-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH-GG CS
  PF00153.22   8 sllaGaiAgaiaalvttPldvvKtrlq.ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkllskk 95 
                  +++++iA+++a++v++P+d++K+rlq  + ++ ++++ ++  +++ +++++Gi++ y Gl+++l+r++++  +++++  t+ ++l+++
  MMETSP1325-20131115|8616_1  30 PFVTSGIAACFASCVIHPIDLAKVRLQlFALQNPGQPKPSFPAIIGGMVQKDGITSIYAGLSASLMRQAIYGTARMGLHRTFSDMLQER 118
                 58899**********************8666777788889999999**************************************99976 PP

  == domain 2    score: 65.3 bits;  conditional E-value: 2e-22
                 HHHHHHHHH----HHHCCHHHCHHHHHHHHHHH...-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH- CS
  PF00153.22   2 klsvlksllaGaiAgaiaalvttPldvvKtrlq...ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkklls 93 
                 ++++ ++++aG+++ga+a+++ tP+dv+ +r+q    +   +++ y+ +++al +i  eeG+ +ly+Gl pn+lr ++ ++ ++++ ++ k+++ 
  MMETSP1325-20131115|8616_1 123 PIGFGEKAVAGLTGGALAVMIGTPFDVALVRMQgdtMKPVAERRGYTHVFNALARISAEEGYGALYKGLAPNVLRGMSMNVGMMACSDQAKEMML 217
                 5688999****************************9888899999**********************************************9985 PP

  == domain 3    score: 55.7 bits;  conditional E-value: 2e-19
                 HHHHHHHH----HHHCCHHHCHHHHHHHHHHH...-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH-G CS
  PF00153.22   3 lsvlksllaGaiAgaiaalvttPldvvKtrlq...ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkllsk 94 
                 +s+  ++ a+a +g++aa++  P+d++K rlq    + ++++ ++kg+ d+  +i+ +eG+ +l+ G+++   r +p+a++ ++t + +k+++s+
  MMETSP1325-20131115|8616_1 227 PSLTTRIGAAASGGFFAAFLSLPFDMLKSRLQdmkPDPKTGRMPFKGLADCGMSIVSKEGPIALWTGFGAYYARCAPHAMVILLTVDEVKRVYSN 321
                 6777888999**********************998888889999***********************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 1594.31
//
Query:       MMETSP1325-20131115|8619_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 738.47
//
Query:       MMETSP1325-20131115|8620_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.32s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1052.31
//
Query:       MMETSP1325-20131115|8622_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 339.48
//
Query:       MMETSP1325-20131115|8624_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-18   64.9   0.2    7.9e-18   64.5   0.1    1.1  1  PF01459.17 Eukaryotic porin
  ------ inclusion threshold ------
      0.032   14.0   0.4      0.068   12.9   0.0    1.7  2  PF11825.3  Nuclear/hormone receptor activator site AF-1


Domain annotation for each model (and alignments):
>> PF01459.17  Eukaryotic porin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   0.1   1.2e-21   7.9e-18     131     265 ..       6     147 ..       2     155 .. 0.92

  Alignments for each domain:
  == domain 1    score: 64.5 bits;  conditional E-value: 1.2e-21
  PF01459.17 131 ivvaslvqsvtkklvlGaeavydtaqnkltkeaaalsyaarYtnkdwtaslqllnk..........qdqlsasyyhkvs.kkvevgaeltykiseg..ettttiGykyeldksttvkakvdskgkvslllekrLrpgvsltlsaevDh 265
                 + ++ ++q++t+++++G+e+  +++  ++t        +a+Y++kdwta+++ + +           ++l+a y++kv   ++ +g+el++++s+   ++++ iG++ +l++s  v  +vd +gk+++++e ++ p +s+tl+ae+ +
  MMETSP1325-20131115|8624_1   6 MAGLAYTQAITPRFSMGGETNLNFTTLQTT-----SAACAKYNTKDWTATGKFASQpdpnpgsdgtMTSLNAQYQRKVVpGRINLGTELQLSLSPAglQNQFMIGAEFQLKQS-KVSTSVDGNGKIATVIESKIDPHMSITLAAEMSY 147
                 56889********************98888.....4455666666*******98879*******99999*********9779************99999**************.*******************************987 PP

>> PF11825.3  Nuclear/hormone receptor activator site AF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.87   5.9e+03      60      74 ..      19      33 ..      14      38 .. 0.70
   2 ?   12.9   0.0     1e-05     0.068      26      78 ..     103     155 ..      79     164 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.87
   PF11825.3 60 vslpstpslgygtls 74
                 s+ + ++l+++tl+
  MMETSP1325-20131115|8624_1 19 FSMGGETNLNFTTLQ 33
                567778888888874 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 1e-05
   PF11825.3  26 sigsprslt.stlssplnglgsPysvissslGspsvslpstpslgygtlsspql 78 
                  ig+  +l+ s++s++++g g    vi s + ++  s+  +  ++y++++ pq 
  MMETSP1325-20131115|8624_1 103 MIGAEFQLKqSKVSTSVDGNGKIATVIESKIDPHM-SITLAAEMSYSGGQDPQS 155
                 5778889999**********************887.****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1065.05
//
Query:       MMETSP1325-20131115|8623_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-19   67.8   1.4    7.3e-19   67.8   1.0    1.6  2  PF00689.16 Cation transporting ATPase, C-terminus
  ------ inclusion threshold ------
      0.072   12.7   0.8        1.2    8.8   0.0    2.4  2  PF10861.3  Protein of Unknown function (DUF2784)


Domain annotation for each model (and alignments):
>> PF00689.16  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   1.0   1.1e-22   7.3e-19      45     181 ..       2     133 ..       1     134 [. 0.89
   2 ?   -2.8   0.6      0.48   3.3e+03     159     175 ..     165     181 ..     161     190 .. 0.74

  Alignments for each domain:
  == domain 1    score: 67.8 bits;  conditional E-value: 1.1e-22
  PF00689.16  45 lfskkmllriliqgllqalvtllafflgllgf.gisekenklssnfaqtaaFitlvlsqifnalnlrsrkeslfkfsgifsnkllllavllslllqvlivyvpglnavfgtaplsleewlialllalvvllvdelrkl 181
                 l+s km+++i  q+l+q+++  ++++ gl    ++     + ++ +  t+ F+t+v +q+fn ln+rs  + +++f g+  n ++ ++++++++ q +++ +  ++++ +t pl+  ew+i+++l++++l+v+ ++++
  MMETSP1325-20131115|8623_1   2 LISAKMWRNISCQSLFQLALLGWMLYDGLDSLlHVP----AADQVRRDTLLFNTFVACQLFNELNARSIGDDMNVFAGLLGNAWFMGVIVFTVVTQYALITY--GGDFTKTCPLTEDEWMITVGLGALSLPVGVIMRF 133
                 899**************9998888855554222222....233678********************************************************..9***************************988876 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.48
  PF00689.16 159 leewlialllalvvllv 175
                 ++ew++++l alv+ lv
  MMETSP1325-20131115|8623_1 165 FWEWVGSALAALVPGLV 181
                 67888888888887665 PP

>> PF10861.3  Protein of Unknown function (DUF2784)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00017       1.2      30      80 ..      80     134 ..      47     145 .. 0.73
   2 ?    2.0   0.1     0.022   1.5e+02      22      55 ..     154     188 ..     151     196 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00017
   PF10861.3  30 prllllhLaaiawvvlvellgi....vCPlTtlenelrtkageagyaggFiehyl 80 
                  +++ + + +++   + +++g     +CPlT+ e+ + +  g  +++ g i+++l
  MMETSP1325-20131115|8623_1  80 AWFMGVIVFTVVTQYALITYGGdftkTCPLTEDEWMITVGLGALSLPVGVIMRFL 134
                 444444444444443334333222338****************999999999987 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.022
   PF10861.3  22 GgllvlrrprllllhLa.aiawvvlvellgivCPl 55 
                 G + ++rrp++++  +  a+a +v   +lg++C +
  MMETSP1325-20131115|8623_1 154 GSAKAVRRPWFFWEWVGsALAALVPGLVLGVACVV 188
                 777889******99885256777788999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.54
# Mc/sec: 1051.73
//
Query:       MMETSP1325-20131115|8626_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-39  134.9   0.0    2.7e-39  134.7   0.0    1.0  1  PF00069.20 Protein kinase domain
      2e-19   69.6   0.0    2.3e-19   69.4   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
    0.00059   19.5   0.0    0.00069   19.3   0.0    1.3  1  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.7   0.0     6e-43   2.7e-39      98     216 ..       3     122 ..       1     131 [. 0.94

  Alignments for each domain:
  == domain 1    score: 134.7 bits;  conditional E-value: 6e-43
                 HHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHH CS
  PF00069.20  98 eeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilk 216
                 ++ + +++qi++gl+++Hs +++HrDLKp+N+L++ + +l i+DFGla+ +  + ++ lt++v tr+Y+APE+l + + y++++DvWs+G+i++e+l +k+ f+ge+ + qle+i ++ +
  MMETSP1325-20131115|8626_1   3 QHFQYFLYQIFRGLKFIHSASVLHRDLKPSNLLVNANCDLAICDFGLARGIdAHGDSPLTEYVQTRWYRAPELLCEMTSYDQQIDVWSVGCIFAEMLRRKPFFRGETPQHQLETIVSVIG 122
                 678899*******************************************99888999*************************************************99999999987765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   0.0     5e-23   2.3e-19     106     205 ..       6     103 ..       2     130 .. 0.85

  Alignments for each domain:
  == domain 1    score: 69.4 bits;  conditional E-value: 5e-23
                 HHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS.-HHHHHHSE.EEHHHHHHH---HHHHHHTTT-GT CS
  PF07714.12 106 lkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWm.apEslkekk.ftsksDvWsfGvllwEiftlgesp 205
                   f +qi +G+++++s +++HrdL   N L++ +    i+DfGLar i  d +  +  ++ +  +W+ apE+l e++ + ++ DvWs G++  E++ +   p
  MMETSP1325-20131115|8626_1   6 QYFLYQIFRGLKFIHSASVLHRDLKPSNLLVNANCDLAICDFGLARGI--DAHGDSPLTEYVQTRWYrAPELLCEMTsYDQQIDVWSVGCIFAEMLRRK--P 103
                 5689********************************************..66667778889*****99****998876*****************8743..3 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.5e-07   0.00069     165     199 ..      21      54 ..      10      91 .. 0.88

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 1.5e-07
                 --EEB-SS-SGGGEEEETTTTEEEE---TT-BBE- CS
  PF01636.18 165 ppvllHgDlhpgNllvdpddgrvgviDfedaglgp 199
                 ++++lH+Dl+p Nllv+  +  +++ Df++a+  +
  MMETSP1325-20131115|8626_1  21 SASVLHRDLKPSNLLVN-ANCDLAICDFGLARGID 54 
                 5789*************.65666*******98665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 545.38
//
Query:       MMETSP1325-20131115|8627_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|8630_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 601.64
//
Query:       MMETSP1325-20131115|8633_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|8633_2  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.59
# Mc/sec: 259.94
//
Query:       MMETSP1325-20131115|8635_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 429.35
//
Query:       MMETSP1325-20131115|8634_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-28   97.1   7.6    6.2e-28   96.6   5.3    1.2  1  PF03382.9 Mycoplasma protein of unknown function, DUF285


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   5.3   4.6e-32   6.2e-28       9     110 ..       2     108 ..       1     118 [. 0.91

  Alignments for each domain:
  == domain 1    score: 96.6 bits;  conditional E-value: 4.6e-32
   PF03382.9   9 nassfnqdiskwdtsnvtdmssmFsgakkfnqdiskWdtsnVtnmsemFsgatsfnq.....diskwntsnVtnmssmFkgatsfnqdis.sWnvskvtdmssmfena 110
                 +a+sfn+dis+w++s+v++m+ mFs+ak+fn++is Wd+s+Vt+m++mF+ga sf+      +is+w++sn + m++mF +a+s+ + +s sW +s + ++  mf+++
  MMETSP1325-20131115|8634_1   2 GATSFNADISRWNVSAVNTMKCMFSSAKAFNANISGWDVSSVTTMDHMFMGAASFKGgdrtsNISRWDVSNCELMDYMFVRASSMSHHLSgSWTTSTADKVC-MFNDS 108
                 5789**************************************************987777789**********************9999879*999887764.88765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 698.07
//
Query:       MMETSP1325-20131115|8632_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-16   57.7   0.2    1.2e-15   57.1   0.1    1.3  1  PF03703.9 Bacterial PH domain


Domain annotation for each model (and alignments):
>> PF03703.9  Bacterial PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.1   8.5e-20   1.2e-15       5      80 .]     103     173 ..      99     173 .. 0.95

  Alignments for each domain:
  == domain 1    score: 57.1 bits;  conditional E-value: 8.5e-20
   PF03703.9   5 t..ytitdrrvvirsGvlgrkttdiplsriqsvsleqsllqrllgl.gdivielaggsrlevelplrsvpdaeelaell 80 
                 +  ++it+rr+++ sG+ g++ t+i +++i +v++    + r +g+ gd+viel++g+    +l++rsvp++ e+++++
  MMETSP1325-20131115|8632_1 103 WvrFKITSRRISVVSGIGGKDLTEITYDEIYEVKY----IFRAFGSvGDMVIELRDGA----KLEMRSVPNFPEVYRYI 173
                 5559*******************************....*******************....9*************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 836.55
//
Query:       MMETSP1325-20131115|8638_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.11   11.9   0.0    1.1  1  PF12038.3 Domain of unknown function (DUF3524)


Domain annotation for each model (and alignments):
>> PF12038.3  Domain of unknown function (DUF3524)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.1e-06      0.11      65     102 ..      11      52 ..       2      59 .] 0.69

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.1e-06
   PF12038.3  65 atsmldlatlrgLtp....elakvplllYfHENQlaYPvsea 102
                 ++  +d   + g  p    +l+++ + +YfH N ++ P++++
  MMETSP1325-20131115|8638_1  11 TSMRFDTNRFSGNLPtelgKLDQMTASMYFHSNSFTGPLPTE 52 
                 444466666666555412245668899*********999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|8639_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00051   20.5   0.6    0.00098   19.6   0.1    1.7  2  PF13432.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.017   14.8   0.3       0.23   11.3   0.0    2.4  2  PF07719.12 Tetratricopeptide repeat
      0.076   12.5   0.1       0.11   12.0   0.0    1.4  1  PF13414.1  TPR repeat


Domain annotation for each model (and alignments):
>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.1   2.1e-07   0.00098      14      60 ..      26      72 ..      22      81 .. 0.86
   2 ?   -1.5   0.0      0.85   3.9e+03      20      34 ..      82      91 ..      74      98 .] 0.56

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 2.1e-07
   PF13432.1 14 deAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalal 60
                ++A+  +++a   aPe ++ l++ + a++++g  ++Aa+l+++ l++
  MMETSP1325-20131115|8639_1 26 EKARIRFRKAQGIAPESPRNLYFSGLAAMEAGSTKQAAKLFQKSLDA 72
                55666777788888****************************99854 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.85
   PF13432.1 20 leaalalaPeaaeal 34
                lea+l+++     a+
  MMETSP1325-20131115|8639_1 82 LEAFLREQ-----AK 91
                44555544.....33 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.098   4.5e+02      18      33 ..      26      41 ..      25      42 .. 0.85
   2 ?   11.3   0.0     5e-05      0.23       4      29 ..      46      71 ..      43      72 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.098
                HHHHHHHHHHHHH-TT CS
  PF07719.12 18 eeAleafekAleldPn 33
                e+A+  f+kA  ++P+
  MMETSP1325-20131115|8639_1 26 EKARIRFRKAQGIAPE 41
                799999****988886 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 5e-05
                HHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  4 lynlGlayyklgdyeeAleafekAle 29
                ly  Gla++++g  ++A+++f+k+l 
  MMETSP1325-20131115|8639_1 46 LYFSGLAAMEAGSTKQAAKLFQKSLD 71
                7888*******************985 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.4e-05      0.11      20      66 ..      26      71 ..       6      74 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.4e-05
   PF13414.1 20 deAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66
                ++A   ++kA  + p+++  +y  +la ++ g   ++A++ ++k+l 
  MMETSP1325-20131115|8639_1 26 EKARIRFRKAQGIAPESPRNLYFSGLAAMEAG-STKQAAKLFQKSLD 71
                78888999999999*****99999******99.7999*999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|8637_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
          1    8.8   0.0          1    8.8   0.0    3.0  3  PF11174.3  Protein of unknown function (DUF2970)


Domain annotation for each model (and alignments):
>> PF11174.3  Protein of unknown function (DUF2970)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.4      0.69   9.4e+03      41      52 ..      51      62 ..      50      64 .. 0.62
   2 ?    8.8   0.0   7.5e-05         1      14      44 ..     107     137 ..     102     140 .. 0.93
   3 ?   -0.6   0.7     0.066     9e+02      40      51 ..     191     202 ..     190     205 .. 0.73

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 0.69
   PF11174.3 41 aalfvllLillV 52
                ++++v +L +++
  MMETSP1325-20131115|8637_1 51 VVMLVYSLCVVA 62
                566677766665 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 7.5e-05
   PF11174.3  14 GVqkgknrerDfarlsplhfiivGlilaalf 44 
                 G+q+++n++rD  +++     i++  +++lf
  MMETSP1325-20131115|8637_1 107 GIQSRRNLARDKMKGRLYLALIAATTAVVLF 137
                 9***************999999999999998 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.066
   PF11174.3  40 laalfvllLill 51 
                 ++++fv+lL l+
  MMETSP1325-20131115|8637_1 191 AVFCFVVLLSLV 202
                 589999887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.70
# Mc/sec: 955.12
//
Query:       MMETSP1325-20131115|8643_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.6   0.0        0.1   12.6   0.0    1.1  1  PF06311.7 NUMB domain
       0.12   12.0   0.1       0.23   11.1   0.0    1.6  2  PF08525.6 Opacity-associated protein A N-terminal motif


Domain annotation for each model (and alignments):
>> PF06311.7  NUMB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.5e-05       0.1      39      54 ..      12      29 ..       9      44 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.5e-05
   PF06311.7 39 sLrlneLPstlqRkk..a 54
                s  ln+LPs+++R +  +
  MMETSP1325-20131115|8643_1 12 SASLNDLPSNMSRPTifK 29
                6789*********88442 PP

>> PF08525.6  Opacity-associated protein A N-terminal motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.1   7.7e+03       3       7 ..      15      19 ..      14      20 .. 0.66
   2 ?   11.1   0.0   3.4e-05      0.23       1      14 [.      26      39 ..      26      44 .. 0.87

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.1
   PF08525.6  3 lqlLP 7 
                l+ LP
  MMETSP1325-20131115|8643_1 15 LNDLP 19
                56677 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 3.4e-05
   PF08525.6  1 tllqlLPklHrrll 14
                t++++LP  Hr+++
  MMETSP1325-20131115|8643_1 26 TIFKPLPAEHRIVV 39
                79*********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 211.44
//
Query:       MMETSP1325-20131115|8644_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   13.6   0.1        0.1   12.2   0.0    1.8  1  PF04382.8 SAB domain


Domain annotation for each model (and alignments):
>> PF04382.8  SAB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   7.4e-06       0.1      11      33 ..     120     142 ..     116     144 .] 0.85

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 7.4e-06
   PF04382.8  11 ellkHqasIsELKrtflEstpep 33 
                 +llk ++ I ELKr f  s+ + 
  MMETSP1325-20131115|8644_1 120 VLLKMKTRIDELKREFGDSKGQK 142
                 799*************9997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 750.16
//
Query:       MMETSP1325-20131115|8648_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       319  (0.0233324); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 217.03
//
Query:       MMETSP1325-20131115|8649_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 645.97
//
Query:       MMETSP1325-20131115|8651_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 504.76
//
Query:       MMETSP1325-20131115|8645_1  [L=507]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-13   47.5   2.7     0.0054   16.8   0.0    6.2  6  PF13812.1  Pentatricopeptide repeat domain
    1.7e-10   40.5   0.2    6.5e-06   25.9   0.0    4.2  4  PF13041.1  PPR repeat family
      3e-09   36.1   7.5      0.076   12.9   0.0    6.0  6  PF01535.15 PPR repeat
     0.0026   17.1   9.3          2    7.8   0.0    5.6  5  PF12854.2  PPR repeat
  ------ inclusion threshold ------
      0.082   12.6   2.9       0.15   11.8   2.0    1.3  1  PF06459.7  Ryanodine Receptor TM 4-6
       0.22    9.6  11.1       0.32    9.0   7.7    1.2  1  PF09770.4  Topoisomerase II-associated protein PAT1
       0.34    9.8   6.5       0.55    9.1   4.5    1.2  1  PF09766.4  Fms-interacting protein


Domain annotation for each model (and alignments):
>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.47   9.2e+02      14      32 ..     281     299 ..     271     301 .. 0.71
   2 ?   -0.2   0.0      0.78   1.5e+03       7      24 ..     309     326 ..     305     336 .. 0.80
   3 ?    2.2   0.0      0.13   2.4e+02       3      23 ..     340     360 ..     339     366 .. 0.82
   4 !   12.9   0.0   4.7e-05     0.091       2      28 ..     379     407 ..     378     408 .. 0.86
   5 !   16.8   0.0   2.8e-06    0.0054       3      34 .]     438     469 ..     436     469 .. 0.93
   6 !    7.8   0.1     0.002       3.9       2      29 ..     472     503 ..     471     505 .. 0.94

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.47
   PF13812.1  14 sgrpeaAlalleeMeqqgv 32 
                  g+   Al++++ M++  v
  MMETSP1325-20131115|8645_1 281 EGNGRVALEVVRLMREDSV 299
                 5666679********9876 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.78
   PF13812.1   7 litalaksgrpeaAlall 24 
                 l++al+k g  ++  +l 
  MMETSP1325-20131115|8645_1 309 LVKALCKHGMLDEIKDLA 326
                 789******999877765 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.13
   PF13812.1   3 tyntlitalaksgrpeaAlal 23 
                  ++tl++ lak+g+ +  + +
  MMETSP1325-20131115|8645_1 340 VFDTLALSLAKMGDYATIEHI 360
                 589***********9877666 PP

  == domain 4    score: 12.9 bits;  conditional E-value: 4.7e-05
   PF13812.1   2 etyntlitalaksgr..peaAlalleeMe 28 
                 + yn li a+a++    p++A+++l+++e
  MMETSP1325-20131115|8645_1 379 RVYNHLIAACANAAKprPDLAREVLARLE 407
                 78*********666666********9986 PP

  == domain 5    score: 16.8 bits;  conditional E-value: 2.8e-06
   PF13812.1   3 tyntlitalaksgrpeaAlalleeMeqqgvkP 34 
                 +y+  ++a+a++gr +++l l+++ +++g+ P
  MMETSP1325-20131115|8645_1 438 SYTNAMRACANAGRTDDVLGLMGDIRRLGLIP 469
                 9**************************99865 PP

  == domain 6    score: 7.8 bits;  conditional E-value: 0.002
   PF13812.1   2 etyntlitalaksgrpea....AlalleeMeq 29 
                 +ty+t + a a s r+e+    Al+ll+eM +
  MMETSP1325-20131115|8645_1 472 ITYATALHAIAMSERVESewihALELLKEMDE 503
                 79****************************75 PP

>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0066        13      16      50 .]     281     315 ..     270     344 .. 0.78
   2 ?    3.2   0.0     0.039        77       2      19 ..     377     394 ..     375     406 .. 0.73
   3 !   25.9   0.0   3.3e-09   6.5e-06       2      47 ..     435     480 ..     434     483 .. 0.95
   4 ?   -0.8   0.0      0.69   1.3e+03      21      32 ..     493     504 ..     488     506 .. 0.84

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0066
   PF13041.1  16 kgkveeAfklfneMkkrgikPnvyTYsilikglck 50 
                 +g+ + A+++ + M++  ++ ++  Y  l k+lck
  MMETSP1325-20131115|8645_1 281 EGNGRVALEVVRLMREDSVRVTDSHYIELVKALCK 315
                 56666677777778887788888888777777776 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.039
   PF13041.1   2 nvvtYNtlIsglckkgkv 19 
                  + +YN+lI +++++ k 
  MMETSP1325-20131115|8645_1 377 TTRVYNHLIAACANAAKP 394
                 566899999999987664 PP

  == domain 3    score: 25.9 bits;  conditional E-value: 3.3e-09
   PF13041.1   2 nvvtYNtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikg 47 
                 +v++Y+  +++++++g+ ++ + l+ + ++ g+ Pn++TY + +++
  MMETSP1325-20131115|8645_1 435 DVMSYTNAMRACANAGRTDDVLGLMGDIRRLGLIPNAITYATALHA 480
                 89**************************************998887 PP

  == domain 4    score: -0.8 bits;  conditional E-value: 0.69
   PF13041.1  21 eAfklfneMkkr 32 
                  A++l++eM +r
  MMETSP1325-20131115|8645_1 493 HALELLKEMDER 504
                 69*******987 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       5.1     1e+04      14      21 ..     252     259 ..     249     260 .. 0.52
   2 !    6.3   0.0     0.005       9.7       3      30 ..     271     298 ..     270     299 .. 0.89
   3 !    8.4   0.0     0.001         2       6      22 ..     309     325 ..     304     326 .. 0.87
   4 ?    2.4   0.0     0.087   1.7e+02       2      13 ..     380     391 ..     379     395 .. 0.84
   5 !   12.9   0.0   3.9e-05     0.076       2      31 .]     438     467 ..     437     467 .. 0.95
   6 ?    5.3   0.1      0.01        20      15      29 ..     490     504 ..     487     505 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 5.1
  PF01535.15  14 GkleeAle 21 
                 ++l+eA e
  MMETSP1325-20131115|8645_1 252 NLLDEARE 259
                 34566655 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.005
  PF01535.15   3 ynslIsgyckaGkleeAlelfkeMkekG 30 
                 y + ++++  +G+ + Ale+ + M+e+ 
  MMETSP1325-20131115|8645_1 271 YGAALRVCTVEGNGRVALEVVRLMREDS 298
                 667789999****************985 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.001
  PF01535.15   6 lIsgyckaGkleeAlel 22 
                 l++++ck+G+l+e  +l
  MMETSP1325-20131115|8645_1 309 LVKALCKHGMLDEIKDL 325
                 899**********8775 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.087
  PF01535.15   2 tynslIsgycka 13 
                 +yn lI +++ a
  MMETSP1325-20131115|8645_1 380 VYNHLIAACANA 391
                 7********986 PP

  == domain 5    score: 12.9 bits;  conditional E-value: 3.9e-05
  PF01535.15   2 tynslIsgyckaGkleeAlelfkeMkekGv 31 
                 +y+  +++++ aG+ +++l l+ ++++ G+
  MMETSP1325-20131115|8645_1 438 SYTNAMRACANAGRTDDVLGLMGDIRRLGL 467
                 8*************************9996 PP

  == domain 6    score: 5.3 bits;  conditional E-value: 0.01
  PF01535.15  15 kleeAlelfkeMkek 29 
                 ++  Alel+keM e+
  MMETSP1325-20131115|8645_1 490 EWIHALELLKEMDER 504
                 6789********886 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.98   1.9e+03      22      29 ..     253     260 ..     251     261 .. 0.86
   2 !    7.8   0.0     0.001         2      13      25 ..     309     321 ..     309     321 .. 0.95
   3 ?    2.4   0.0     0.048        94       2      16 ..     373     387 ..     372     391 .. 0.87
   4 ?    1.9   0.0      0.07   1.4e+02       2      29 ..     431     458 ..     430     462 .. 0.85
   5 !    5.4   0.1    0.0056        11       2      24 ..     466     488 ..     465     502 .. 0.68

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.98
   PF12854.2  22 rvdeAvel 29 
                 ++deA el
  MMETSP1325-20131115|8645_1 253 LLDEAREL 260
                 79***998 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.001
   PF12854.2  13 LIdGlCraGrvde 25 
                 L+++lC+ G++de
  MMETSP1325-20131115|8645_1 309 LVKALCKHGMLDE 321
                 899*********8 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.048
   PF12854.2   2 GlkPdvvTYNtLIdG 16 
                 G  P++  YN LI +
  MMETSP1325-20131115|8645_1 373 GPTPTTRVYNHLIAA 387
                 789**********86 PP

  == domain 4    score: 1.9 bits;  conditional E-value: 0.07
   PF12854.2   2 GlkPdvvTYNtLIdGlCraGrvdeAvel 29 
                 +l+ dv++Y+    +   aGr d+ + l
  MMETSP1325-20131115|8645_1 431 NLRADVMSYTNAMRACANAGRTDDVLGL 458
                 5789*****************9996655 PP

  == domain 5    score: 5.4 bits;  conditional E-value: 0.0056
   PF12854.2   2 GlkPdvvTYNtLIdGlCraGrvd 24 
                 Gl P+++TY t +++   + rv+
  MMETSP1325-20131115|8645_1 466 GLIPNAITYATALHAIAMSERVE 488
                 899******99888766666666 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.0   7.6e-05      0.15      36     114 ..      15      92 ..       3     105 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 7.6e-05
   PF06459.7  36 geteeeevgsdafgldvkkeggkrhdaepgLgdvsevepeepptpeeaaaekkelkeeeeepkseaekadledgekeek 114
                   ++ e++g++a g+ ++  ++   +++ ++ d +  +p++pp p+++++++++++++++ + ++   +++e  e e +
  MMETSP1325-20131115|8645_1  15 MAVSAENEGTQAAGIAMEWSNR-MVESHSAMRDGGVGQPMPPPPPQQQQQQQQQQQQQQQRRRQQQRGVEEEYAEHERR 92 
                 5567788999******965544.59**********************99999966666666666666666665555433 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   7.7   0.00016      0.32     189     261 ..       8      82 ..       2     124 .. 0.45

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00016
   PF09770.4 189 rqaalpqqakpelpsqypqppqqlqqevqqqlqqapsqa...paqaplpaqlpqqlqnlqqqql.pqlsqqmppqpv 261
                 + aa+p +a+++ +++ + ++   ++e+ + + +  s++      +p+p+++pqq+q+ qqqq+ +q++++++++ v
  MMETSP1325-20131115|8645_1   8 STAAMPGMAVSAENEGTQAAGI--AMEWSNRMVESHSAMrdgGVGQPMPPPPPQQQQQQQQQQQqQQQRRRQQQRGV 82 
                 4445554444444444443333..22333222222222211111222233333333333322220222222222222 PP

>> PF09766.4  Fms-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   4.5   0.00028      0.55     213     245 ..      56      88 ..      18      96 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00028
   PF09766.4 213 qeqddesdedeeeeqkrskkrrktdqekeddke 245
                    +++++++++++q+++++r+++++++e+++e
  MMETSP1325-20131115|8645_1  56 PPPQQQQQQQQQQQQQQQRRRQQQRGVEEEYAE 88 
                 344455555555555555556666666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1388  (0.101521); expected 273.4 (0.02)
Passed bias filter:                      732  (0.0535401); expected 273.4 (0.02)
Passed Vit filter:                       108  (0.00789936); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.12u 0.38s 00:00:01.50 Elapsed: 00:00:00.61
# Mc/sec: 1991.73
//
Query:       MMETSP1325-20131115|8650_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-39  134.9   0.0    2.1e-39  134.6   0.0    1.1  1  PF00406.17 Adenylate kinase
    1.1e-06   28.5   0.0    1.6e-06   27.9   0.0    1.3  1  PF13671.1  AAA domain
    0.00033   20.2   0.0     0.0004   19.9   0.0    1.2  1  PF07931.7  Chloramphenicol phosphotransferase-like protein
     0.0009   19.4   0.0      0.002   18.2   0.0    1.7  1  PF13238.1  AAA domain
  ------ inclusion threshold ------
      0.093   12.2   0.1       0.13   11.7   0.1    1.3  1  PF03469.9  XH domain


Domain annotation for each model (and alignments):
>> PF00406.17  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.6   0.0   7.8e-43   2.1e-39      11     150 ..       2     147 ..       1     148 [. 0.97

  Alignments for each domain:
  == domain 1    score: 134.6 bits;  conditional E-value: 7.8e-43
                 -HHHHHHHHCS-EEEE---HHHHHHHCT-----HHHHHHHTT----HHHHHHHHHHHHHSHCGH-EEEEE----SHHHHHHHHHHHHCTT-EESEEEEEE--HHHHHHHHHH.........GSHHHHHHHHHHHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00406.17  11 tqaeklvkkyglvhlstGdllRaevksgtelGkeakevmdkgelvpdevvvklvkerleqkdkkkgflldgfPRtveqaealeelleeekvkldlvleldvpeevlveRllk.........DneetvkkRletykkqtepvidyykkkg 150
                 t ++++v+++g+vhls+GdllRae ksg+elG +++  +++g++vp ev+v+l++e+++++  ++ fl+dgfPR+ ++ + +++l+  +++k+++vl l++peev+ +Rllk         Dn ++++kR++tyk++t+pv++ + k++
  MMETSP1325-20131115|8650_1   2 TMCARIVEEFGFVHLSAGDLLRAERKSGSELGDMIEGHIQAGSIVPAEVTVRLLDEAMKRS-GATCFLVDGFPRNKDNLDCWDKLM--NHCKVEFVLMLECPEEVMEQRLLKrgetsgrsdDNIDSIRKRFKTYKESTMPVVQSFAKEN 147
                 89*********************************************************88.8999******************88..789******************************************************9976 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   5.9e-10   1.6e-06      14     137 ..       2     133 ..       1     138 [. 0.77

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 5.9e-10
   PF13671.1  14 tlaerllkklgyvrlsqdtlrkrlfg...tdqqsktdytrvlkr.lyqilnklarkal.sagrsvivdatnlsr.eerarfvklakrlgvpvrivylevpeetlreRlakRerng...ddrsevpeealdrml 137
                 t + r++++ g+v+ls+ +l ++ ++   + ++ ++  +++ +    +++ +l+ +a+ ++g+++ +  ++ ++ ++ + ++kl ++ +v+  ++ le+pee++++Rl kR++++   dd ++   ++++ ++
  MMETSP1325-20131115|8650_1   2 TMCARIVEEFGFVHLSAGDLLRAERKsgsELGDMIEGHIQAGSIvPAEVTVRLLDEAMkRSGATCFLVDGFPRNkDNLDCWDKLMNHCKVE-FVLMLECPEEVMEQRLLKRGETSgrsDDNIDSIRKRFKTYK 133
                 67889999999****999988866664576666777778877773344778899999867888899988998876999********99988.6899*****************87444455555555555555 PP

>> PF07931.7  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.5e-07    0.0004      77     132 ..      57     113 ..      22     140 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.5e-07
                 HHHHH---EEEEE-------HHHHHHHHH-----EEEE-.-B---------TTT--- CS
   PF07931.7  77 aamaraGnnvivDdvilekewlvdllrrllsgldvllVG.vrcplevlerRelergd 132
                 +am r G+   + d +  +++  d++ +l+++++v +V  + cp ev+e+R l+rg+
  MMETSP1325-20131115|8650_1  57 EAMKRSGATCFLVDGFPRNKDNLDCWDKLMNHCKVEFVLmLECPEEVMEQRLLKRGE 113
                 5899999987554455555557*************9996269*************97 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   7.5e-07     0.002      77     125 ..      68     124 ..      20     128 .. 0.76

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 7.5e-07
   PF13238.1  77 iidghlaele.ledlkdlkl.......vvLradpeelarRlekRgrkeekiaeneea 125
                 ++dg+++++  l+ +++l+         +L++++e++ +Rl kRg+++ +  +n ++
  MMETSP1325-20131115|8650_1  68 LVDGFPRNKDnLDCWDKLMNhckvefvLMLECPEEVMEQRLLKRGETSGRSDDNIDS 124
                 6777777776333444444488888889*********************99888765 PP

>> PF03469.9  XH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   4.8e-05      0.13      43      91 ..     125     174 ..      99     183 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.8e-05
   PF03469.9  43 dwqpfkvvesgeeekevvd..eddekLkkLkeel.Geevynavkkalleine 91 
                  ++ fk+ +  e +++vv+   +++k+++ k +   eevy+ vk+a++e+ e
  MMETSP1325-20131115|8650_1 125 IRKRFKTYK--ESTMPVVQsfAKENKVREVKSDRaPEEVYADVKTAICEVTE 174
                 456666533..334444431135569*****98526*************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 974.17
//
Query:       MMETSP1325-20131115|8653_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.71
# Mc/sec: 172.13
//
Query:       MMETSP1325-20131115|8654_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.33s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 249.83
//
Query:       MMETSP1325-20131115|8652_1  [L=495]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-71  238.6   0.0    8.7e-71  237.9   0.0    1.3  1  PF00069.20 Protein kinase domain
    5.2e-35  120.6   0.0    9.1e-35  119.9   0.0    1.3  1  PF07714.12 Protein tyrosine kinase
    5.1e-17   59.6   2.3    2.3e-05   23.2   0.1    3.9  3  PF00036.27 EF hand
    1.3e-16   60.4   1.9    8.7e-11   41.6   0.2    2.7  2  PF13499.1  EF-hand domain pair
    4.8e-13   47.6   2.8    9.4e-05   21.8   0.0    4.4  4  PF13405.1  EF-hand domain
    7.5e-12   43.9   3.5    1.6e-05   23.8   0.0    3.4  3  PF13202.1  EF hand
    2.5e-09   36.4   6.7     0.0002   20.7   0.0    4.3  4  PF13833.1  EF-hand domain pair
    4.3e-06   26.2   0.8      0.014   15.0   0.1    3.1  3  PF12763.2  Cytoskeletal-regulatory complex EF hand
    2.8e-05   23.8   0.6    0.00012   21.8   0.2    2.1  2  PF01636.18 Phosphotransferase enzyme family
     0.0057   15.8   0.0      0.019   14.1   0.0    1.9  2  PF10707.4  PhoP regulatory network protein YrbL
     0.0062   16.0   1.4      0.022   14.2   0.4    2.2  3  PF01633.15 Choline/ethanolamine kinase
     0.0067   15.4   0.0      0.013   14.4   0.0    1.5  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.064   13.1   0.1       0.34   10.8   0.0    2.2  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.9   0.0   8.3e-74   8.7e-71       4     260 .]      52     313 ..      49     313 .. 0.92

  Alignments for each domain:
  == domain 1    score: 237.9 bits;  conditional E-value: 8.3e-74
                 EEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH.....HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E...EE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20   4 leklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllk.....kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgel...kiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                   +lG G +G+V ++++k+t++ +AvK++ k++ ++ ++   + E+++l+ +sHp+i++l++vfe++++l++v++++ gg+lfd ++     +eg++se ++ +++++il +l+y+H+ +iiHrDLKpeN+L+ +k +     i+DFGl++   + ++e ++t+vgt++Y+APEvl   k+ytk++D+Ws+Gvi+y ll+g +pf+ge+++    +i+   ++    d   + s se++k+lik ll+k+p++R+taee++++p++
  MMETSP1325-20131115|8652_1  52 RAELGHGHYGSVRRCRNKETQEWFAVKRILKKKVSRLES--LTTEIELLRAVSHPHIIQLVDVFEDEQYLHIVTDLCTGGELFDRIMeksnsEEGHYSEMDCARLMYSILDALDYCHNLNIIHRDLKPENFLFRDKTDEsdlVIIDFGLSRFGpQDEGEFMKTRVGTPYYIAPEVLG--KHYTKACDLWSVGVIMYILLSGVPPFYGETDQAIFDMIKAADTTLEFPDDLGWGSVSEDAKNLIKALLQKNPDRRPTAEEAKQDPFF 313
                 678***************************999999876..557*******************************************9999999999************************************965554566********977999999****************99..*****************************7777777777776666666677788999****************************98 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.9   0.0   8.6e-38   9.1e-35       5     255 ..      53     307 ..      50     310 .. 0.88

  Alignments for each domain:
  == domain 1    score: 119.9 bits;  conditional E-value: 8.6e-38
                 EEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHT...GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...TTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH.HTT-BS---TT.....SBHHHHHHHHHHT-SSGGGS--HHHH CS
  PF07714.12   5 kklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkk...ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLlee...ekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell.kegkrlekpek.....cpeelyelmkqCweeepeeRptfkel 255
                  +lG+G++G+V +++ k    +++   avK + +++ ++  e++ +e++++++++hp+i++l+ v+ +e+ l ivt++++gG+L + + +k   e+ + +  d  ++++ i ++++y ++ +++HrdL   N L  +   e+   i DfGL+r    +d+ + ++++     ++apE+l  k++t++ D Ws Gv+++ +++ g  p+ g +++ +++++  +++ le p++     ++e+ ++l+k  ++++p++Rpt +e 
  MMETSP1325-20131115|8652_1  53 AELGHGHYGSVRRCRNK----ETQEWFAVKRILKKKVSR-LESLTTEIELLRAVSHPHIIQLVDVFEDEQYLHIVTDLCTGGELFDRIMEKsnsEEGHYSEMDCARLMYSILDALDYCHNLNIIHRDLKPENFLFRDktdESDLVIIDFGLSRFG-PQDEGEFMKTRVGTPYYIAPEVLG-KHYTKACDLWSVGVIMYILLS-GVPPFYGETDQAIFDMIkAADTTLEFPDDlgwgsVSEDAKNLIKALLQKNPDRRPTAEEA 307
                 68*************99....88999*****97777766.8*******************************************9999888677778899999********************************98554568999*******99.55555555666666679****885.68***************9998.88***************666888999986333336899*****************98875 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   6.1e-08   6.4e-05       1      28 [.     363     390 ..     363     391 .. 0.94
   2 !   12.4   0.1   6.2e-05     0.066       2      26 ..     399     423 ..     398     426 .. 0.88
   3 !   23.2   0.1   2.2e-08   2.3e-05       2      26 ..     465     489 ..     464     492 .. 0.93

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 6.1e-08
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkk 28 
                 +lk +F+ +D+Dg+G +s +E+ ealk+
  MMETSP1325-20131115|8652_1 363 DLKAVFEAIDTDGSGSLSISELNEALKN 390
                 5899*********************986 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 6.2e-05
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 ++ +++ +D Dgd  +++ Ef++a 
  MMETSP1325-20131115|8652_1 399 IESIMAGIDFDGDQELDYHEFLAAT 423
                 6789999**************9986 PP

  == domain 3    score: 23.2 bits;  conditional E-value: 2.2e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 ++e+ +++D Dg G+I++eEfk+++
  MMETSP1325-20131115|8652_1 465 AQEILDKVDLDGGGTIDYEEFKALM 489
                 589********************99 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.2   8.3e-14   8.7e-11       2      65 ..     364     422 ..     352     423 .. 0.93
   2 !   17.5   0.1   2.8e-06     0.003      37      66 .]     460     489 ..     430     489 .. 0.90

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 8.3e-14
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 lk +F+++D+dg+g+l+  eL ++lk+++     ++++  ++ i++ +D +gd  l++ Efl+a
  MMETSP1325-20131115|8652_1 364 LKAVFEAIDTDGSGSLSISELNEALKNAN-----SQMQATIESIMAGIDFDGDQELDYHEFLAA 422
                 6779************************6.....789999999******************987 PP

  == domain 2    score: 17.5 bits;  conditional E-value: 2.8e-06
   PF13499.1  37 evrevldyifkelDkngdGvlsfeEflqai 66 
                 ++re +++i++++D++g G++++eEf +++
  MMETSP1325-20131115|8652_1 460 GSREHAQEILDKVDLDGGGTIDYEEFKALM 489
                 57899999******************9987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   8.9e-08   9.4e-05       1      27 [.     363     389 ..     363     394 .. 0.93
   2 !    9.1   0.0    0.0011       1.1       8      25 ..     405     422 ..     398     429 .. 0.84
   3 ?   -0.3   0.0       1.1   1.2e+03       2      24 ..     435     457 ..     434     461 .. 0.81
   4 !   13.0   0.1   6.3e-05     0.067       4      27 ..     467     490 ..     464     494 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 8.9e-08
                 HHH---GCC-------B---HHHHHHH CS
   PF13405.1   1 elreaFklfDkdgdGkidaeELrdaLr 27 
                 +l+++F+++D+dg+G ++++EL  aL+
  MMETSP1325-20131115|8652_1 363 DLKAVFEAIDTDGSGSLSISELNEALK 389
                 589***********************9 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0011
                 CC-------B---HHHHH CS
   PF13405.1   8 lfDkdgdGkidaeELrda 25 
                  +D+dgd ++d +E+++a
  MMETSP1325-20131115|8652_1 405 GIDFDGDQELDYHEFLAA 422
                 58*************886 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 1.1
                 HH---GCC-------B---HHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrd 24 
                 + +aF+++  d   +id++ L +
  MMETSP1325-20131115|8652_1 435 MLSAFQKLTGDAAKEIDIDILTS 457
                 6799****999999999986665 PP

  == domain 4    score: 13.0 bits;  conditional E-value: 6.3e-05
                 ---GCC-------B---HHHHHHH CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                 e+ ++ D dg G+id eE+++++ 
  MMETSP1325-20131115|8652_1 467 EILDKVDLDGGGTIDYEEFKALML 490
                 677899**************9875 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   1.5e-08   1.6e-05       1      23 [.     364     386 ..     364     389 .. 0.91
   2 ?   -1.2   0.1       1.3   1.3e+03       8      13 ..     406     411 ..     406     421 .. 0.79
   3 !   19.0   0.1   5.3e-07   0.00055       3      25 .]     467     489 ..     465     489 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 1.5e-08
                 HHHHHHHH--S----B-HHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkr 23 
                 lk++F+a+D++g+G +s++EL +
  MMETSP1325-20131115|8652_1 364 LKAVFEAIDTDGSGSLSISELNE 386
                 799******************87 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 1.3
                 H--S-- CS
   PF13202.1   8 fDlNgD 13 
                 +D++gD
  MMETSP1325-20131115|8652_1 406 IDFDGD 411
                 799999 PP

  == domain 3    score: 19.0 bits;  conditional E-value: 5.3e-07
                 HHHHHH--S----B-HHHHHHHH CS
   PF13202.1   3 dtFrafDlNgDGkIsreELkrlv 25 
                 ++++++Dl+g G+I+ eE+k+l+
  MMETSP1325-20131115|8652_1 467 EILDKVDLDGGGTIDYEEFKALM 489
                 56899***************986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       1.7   1.8e+03      23      36 ..     256     269 ..     256     270 .. 0.88
   2 !    8.1   0.1    0.0016       1.7      27      46 ..     364     383 ..     339     390 .. 0.74
   3 !    8.4   0.0    0.0013       1.4      27      50 ..     399     422 ..     396     426 .. 0.89
   4 !   20.7   0.0   1.9e-07    0.0002      25      53 ..     463     491 ..     452     492 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 1.7
   PF13833.1  23 seeevdilfrefDt 36 
                 +++ + ++++++Dt
  MMETSP1325-20131115|8652_1 256 TDQAIFDMIKAADT 269
                 678899******98 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0016
   PF13833.1  27 vdilfrefDtdgdGkisfeE 46 
                 + ++f ++Dtdg+G +s  E
  MMETSP1325-20131115|8652_1 364 LKAVFEAIDTDGSGSLSISE 383
                 5688***********99665 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0013
   PF13833.1  27 vdilfrefDtdgdGkisfeEFcvl 50 
                 ++ ++  +D+dgd  +++ EF+++
  MMETSP1325-20131115|8652_1 399 IESIMAGIDFDGDQELDYHEFLAA 422
                 789999***************975 PP

  == domain 4    score: 20.7 bits;  conditional E-value: 1.9e-07
   PF13833.1  25 eevdilfrefDtdgdGkisfeEFcvller 53 
                 e ++++++++D+dg G i++eEF++l+  
  MMETSP1325-20131115|8652_1 463 EHAQEILDKVDLDGGGTIDYEEFKALMLQ 491
                 4489**********************975 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.1   1.2e+03      71     102 ..     259     292 ..     256     293 .. 0.73
   2 !   15.0   0.1   1.3e-05     0.014       3      68 ..     355     422 ..     352     444 .. 0.83
   3 !    8.1   0.0    0.0018       1.8      37      69 ..     457     489 ..     432     494 .. 0.76

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 1.1
   PF12763.2  71 lifdlvnge..ikdvPselPewlvpeskahlvqa 102
                  ifd++     + + P++l    v+e  ++l++a
  MMETSP1325-20131115|8652_1 259 AIFDMIKAAdtTLEFPDDLGWGSVSEDAKNLIKA 292
                 69***98651145679998888888888888875 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 1.3e-05
   PF12763.2   3 kleeleikkyweifsglkpe.dnkltgdkvapvlknskle.edklekiwdladidedgkldfeefcia 68 
                 +l e+ei     +f++++ + +  l+ +++   lkn++ + +  +e+i    d d d +ld++ef  a
  MMETSP1325-20131115|8652_1 355 ELTETEIGDLKAVFEAIDTDgSGSLSISELNEALKNANSQmQATIESIMAGIDFDGDQELDYHEFLAA 422
                 678899999999999997642789***********9876625689********************754 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.0018
   PF12763.2  37 nskleedklekiwdladidedgkldfeefciam 69 
                 +   + ++ ++i d  d+d  g++d+eef   m
  MMETSP1325-20131115|8652_1 457 SICGSREHAQEILDKVDLDGGGTIDYEEFKALM 489
                 4445567778899999*************8777 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.73   7.6e+02       4      68 ..      54     120 ..      51     146 .. 0.70
   2 !   21.8   0.2   1.1e-07   0.00012     167     199 ..     169     203 ..     150     205 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.73
                 EEE--SSEEEEEEEETT..TEE.EEEESSC..CHHHHHHHHHHHHHHHCCSSSB--BEEE..E-CSSCS CS
  PF01636.18   4 elsgGasnrtyrvttga.gryv.lrrarpa..raaeelrrevallrlLakagipvPevlagdtdddvlg 68 
                 el+ G +  + r++ ++ ++++ ++r++++     e+l  e +llr+++  +i   ++++  +d++ l 
  MMETSP1325-20131115|8652_1  54 ELGHGHYGSVRRCRNKEtQEWFaVKRILKKkvSRLESLTTEIELLRAVSHPHI--IQLVDVFEDEQYLH 120
                 66777777777777777666655999999988899999999999999986555..35555444555554 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 1.1e-07
                 EEB-SS-SGGGEEEE...TTTTEEEE---TT-BBE- CS
  PF01636.18 167 vllHgDlhpgNllvd...pddgrvgviDfedaglgp 199
                  ++H+Dl+p N l++   ++ + v +iDf+++++gp
  MMETSP1325-20131115|8652_1 169 NIIHRDLKPENFLFRdktDESDLV-IIDFGLSRFGP 203
                 68*************977666677.*********98 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   1.8e-05     0.019     127     165 ..     158     195 ..     139     204 .. 0.86
   2 ?   -3.0   0.0       3.2   3.4e+03     127     139 ..     349     361 ..     328     402 .. 0.58

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.8e-05
   PF10707.4 127 LeefleallenrIvardlkpknivvgrrsegeeelvlvD 165
                 + + l+++ +++I+ rdlkp+n++++++++++ +lv++D
  MMETSP1325-20131115|8652_1 158 ILDALDYCHNLNIIHRDLKPENFLFRDKTDES-DLVIID 195
                 5678899********************99999.*****9 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 3.2
   PF10707.4 127 LeefleallenrI 139
                 L+ + ++l e++I
  MMETSP1325-20131115|8652_1 349 LKVMADELTETEI 361
                 3333333333332 PP

>> PF01633.15  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.5   1.6e+03       8      34 ..      79     105 ..      71     123 .. 0.80
   2 !   14.2   0.4   2.1e-05     0.022     108     169 ..     137     196 ..     129     204 .. 0.79
   3 ?   -2.3   0.0       2.3   2.4e+03      45      63 ..     332     350 ..     325     356 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.5
                 EEE-S-.--HHHHHHHHHHHHHHHHTT CS
  PF01633.15   8 RiygkgteelidretEsvvfallserg 34 
                 Ri +k++++l++  tE++ ++ +s+ +
  MMETSP1325-20131115|8652_1  79 RILKKKVSRLESLTTEIELLRAVSHPH 105
                 889999999999999999998888755 PP

  == domain 2    score: 14.2 bits;  conditional E-value: 2.1e-05
                 -EE--TT----EE-HHHHHHHHHHHHHHHTT----EEEE-S------EEE..-------EE--- CS
  PF01633.15 108 qkkeskkkqlklinledlekeleeleklleekespvvfCHnDlqegNill..nkeekklvlIDF 169
                 +k++s++ + + +++++l+  + ++  ++    +++++ H Dl ++N+l+  +++e++lv+IDF
  MMETSP1325-20131115|8652_1 137 EKSNSEEGHYSEMDCARLMYSILDALDYC----HNLNIIHRDLKPENFLFrdKTDESDLVIIDF 196
                 56667777777778888777777777777....679999***********76777899****** PP

  == domain 3    score: -2.3 bits;  conditional E-value: 2.3
                 ---EE----EEE--TTGGG CS
  PF01633.15  45 ngrieefiesrtlstedlr 63 
                 +gr+e+f++ ++l++  l+
  MMETSP1325-20131115|8652_1 332 KGRLEKFMGMNKLKKMALK 350
                 799*****99999987765 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   1.3e-05     0.013     133     166 ..     164     197 ..     138     208 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.3e-05
   PF06293.9 133 kmhragvnHtdlnahnilldeeeekakvwliDld 166
                   h+ ++ H+dl + n+l++++ ++ ++ +iD+ 
  MMETSP1325-20131115|8652_1 164 YCHNLNIIHRDLKPENFLFRDKTDESDLVIIDFG 197
                 5799****************************95 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00033      0.34      57     111 ..     365     420 ..     320     422 .. 0.85
   2 ?   -1.1   0.0       1.6   1.7e+03      87     111 ..     462     486 ..     432     487 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00033
   PF10591.4  57 eWkFnqlDtnkdkvlsksElap.lraplvklehCikeffksCDadkdkkisleEWc 111
                 +  F+ +Dt+  ++ls sEl++ l++   ++++ i++ +   D d d++++ +E+ 
  MMETSP1325-20131115|8652_1 365 KAVFEAIDTDGSGSLSISELNEaLKNANSQMQATIESIMAGIDFDGDQELDYHEFL 420
                 55799***************863777779*************************97 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 1.6
   PF10591.4  87 ehCikeffksCDadkdkkisleEWc 111
                 ++  +e +++ D+d  ++i+ eE+ 
  MMETSP1325-20131115|8652_1 462 REHAQEILDKVDLDGGGTIDYEEFK 486
                 4556788999999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.87u 0.37s 00:00:01.24 Elapsed: 00:00:00.56
# Mc/sec: 2081.05
//
Query:       MMETSP1325-20131115|8657_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1182.88
//
Query:       MMETSP1325-20131115|8658_1  [L=880]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-25   87.3   5.0    8.5e-23   80.6   0.0    3.2  3  PF13949.1  ALIX V-shaped domain binding to HIV
    2.5e-07   29.6   0.0      4e-07   28.9   0.0    1.3  1  PF03097.13 BRO1-like domain
    4.6e-07   29.3   0.0    1.3e-06   27.8   0.0    1.8  1  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
      0.044   13.2   0.0       0.11   11.9   0.0    1.6  1  PF09288.5  Fungal ubiquitin-associated domain


Domain annotation for each model (and alignments):
>> PF13949.1  ALIX V-shaped domain binding to HIV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.6   0.0   2.5e-26   8.5e-23       6     293 ..     140     512 ..     136     515 .. 0.90
   2 ?   -3.8   0.0       1.2   4.2e+03     153     172 ..     701     718 ..     698     727 .. 0.77
   3 ?   -3.5   0.5         1   3.5e+03     151     173 ..     821     843 ..     814     844 .. 0.77

  Alignments for each domain:
  == domain 1    score: 80.6 bits;  conditional E-value: 2.5e-26
                 ---HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCGSS-HHHHCHHHHH---HHHHHHHH..HHHH---HHHHHHHHHHHH...HHHTSSHHH..................................................HHHHS------SSG---H....HHHHHHHHHHHHHHHHHHT---HHHHHH....----HHHHHHHHHHH---.........................--HHHHHHHHHHH----HHHHHHHHHHH---HHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13949.1   6 glpesllekaeelrseggiesleeslddldelkqavesileeikeqLdeeesedeklrakygerwtrspsseltaelreelrkyrealee..AsesDsqlrskleeieedl...elLsspeee..................................................leaslpssspeksdevse....qikrlrelleklnelkaeRaklleeLke...kihdddiskllielnkkss.........................sneeqlfekeLekfdplqerleqniskQesllkelkeaneeflqdkkskyekkerekvlqrleeaydkykelssnlekglkFYndLlkileslrkevkdfvnarr 293
                 g pes++ k+ e++++g+   l++ + +l+ ++++  ++l  +++ Ldee   d+ +r k+ ++++  +s++  + ++ +l+ yr+  ++   ++  +++ + ++  e+++   +lL +p+++                                                  l++++p+ ++ ++  v+       + l   l kl +l + R++l  eL +   ++++  ++ + + +++                            +++++l +    ++   +++l+qni++Q   ++++  +n+ f  +++ ++++ ere+++q  e+a  +++e+++ l++g+ FY+dL  +l +l+++ + + +a++
  MMETSP1325-20131115|8658_1 140 GFPESVWTKVYEVQMKGADWALRSKMTELEGKAAETGEQLGLVQRVLDEEYANDDNFRIKH-PTFQGVQSRDSGQHFQHDLAHYRQLWDQvrVKKMKKKIEKYIDXQEAHIapfDLLNAPMASllksmarvkggvidrsrmnlarssdaalharldgkaysegmklctmsreqLDQAMPKPDEAEEKGVVAvaayDTSVLSGELLKLAQLIQARDTLCAELSDactQAQEGAVETVAKFVEEG-NaiaaggdvgsggsdgpldlaagepsAELSNLLAGITTEIAVKKDKLDQNIAEQGLQMQRIMVENDAFQAARSADAITLERERIVQGAENAAIAFMEMHAQLSEGVAFYTDLVGRLGQLLQTSEGYSYAQN 512
                 89**********************************************************9.789999**********************7778888889888888666654449999999999999999999999999999999999999999999999999999999999999999998888777774422336999***********************944344455666666655544.25899********************8899***********************************************************************************************9999887 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 1.2
                 HHHHHHHT---HHHHHH.-- CS
   PF13949.1 153 lnelkaeRaklleeLkekih 172
                 l e+  eR+k+l+ Lk   h
  MMETSP1325-20131115|8658_1 701 LTEMGFERHKILQALKA--H 718
                 67788899999999997..4 PP

  == domain 3    score: -3.5 bits;  conditional E-value: 1
                 HHHHHHHHHT---HHHHHH.--- CS
   PF13949.1 151 eklnelkaeRaklleeLkekihd 173
                  + +   ++Ra+l+++L+e+i+d
  MMETSP1325-20131115|8658_1 821 ARRRAAARRRATLVHDLNEEIED 843
                 5555667899********99986 PP

>> PF03097.13  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   1.2e-10     4e-07     266     361 ..       4      93 ..       1     101 [. 0.81

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 1.2e-10
  PF03097.13 266 lellkealklakkckskselledlkelkdrikekleeaekdNdfiyheevpdeveltsikkaalvkalpinellsqtkekgpdlfkklvPiavhea 361
                 ++l+ +al+l+     + ++ ++ + lk+ i ++   a  dN +iy+e vp+ ++lt+++kaalvk+++++      ++ +++lf+ l P  v++ 
  MMETSP1325-20131115|8658_1   4 EALCAKALELEHL--LTGTVAQTADNLKAMIARRKGPAMDDNRMIYLEAVPPADSLTPVGKAALVKPIEPTL----DATDIKPLFSGLFPRFVMQE 93 
                 5555566655555..5667778888899999999999*******************************6555....45789*********888765 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   3.9e-10   1.3e-06       4      34 ..     696     726 ..     695     727 .. 0.94

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 3.9e-10
                 HHHHHHHH----HHHHHHHHHHTTTSHHHHH CS
  PF00627.26   4 eaiqqLreMGfsreeakkALratnnnvErAv 34 
                 +a+ +L eMGf+r+  ++AL+a+n+++++A 
  MMETSP1325-20131115|8658_1 696 QAVIRLTEMGFERHKILQALKAHNGDEQAAL 726
                 78999************************96 PP

>> PF09288.5  Fungal ubiquitin-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.2e-05      0.11      12      31 ..     697     716 ..     693     719 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.2e-05
                 HHHHHHH----HHHHHHHHH CS
   PF09288.5  12 lVdefvsqGFekdkvievLk 31 
                 +V  +  +GFe+ k+ ++Lk
  MMETSP1325-20131115|8658_1 697 AVIRLTEMGFERHKILQALK 716
                 5778999************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (880 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.28u 0.31s 00:00:01.59 Elapsed: 00:00:00.57
# Mc/sec: 3635.85
//
Query:       MMETSP1325-20131115|8655_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0034   16.0   0.0     0.0041   15.8   0.0    1.1  1  PF04515.7 Plasma-membrane choline transporter


Domain annotation for each model (and alignments):
>> PF04515.7  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     3e-07    0.0041     249     327 ..       4      89 ..       2      96 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3e-07
   PF04515.7 249 lvldkltdfvlflgkllvsaltgllaylllkktkp.......kedlnyyavpvilvfiiayliasvffsvyesavdtlfvcfaedp 327
                 +++d+l+++v+ +g+l+++a+ g+++y+l+++++        +++ +    ++++ + i+  ++ + f ++ ++ +++++   e  
  MMETSP1325-20131115|8655_1   4 ITNDGLVGTVILMGQLIMAAGGGYISYYLFEYKDWadglvaaTSKTDAESNLIMMGAAIGWGVSGILFGLVTAGNKAVLILWKEKS 89 
                 79*****************************9988999999877777788888888889999999999999988888887766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 670.00
//
Query:       MMETSP1325-20131115|8659_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 987.89
//
Query:       MMETSP1325-20131115|8656_1  [L=1051]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.5e-14   51.2   0.0    1.7e-13   50.4   0.0    1.4  1  PF10377.4 Autophagy-related protein 11
    1.7e-12   46.7   0.2    1.9e-11   43.3   0.0    2.1  2  PF04108.7 Autophagy protein Apg17
  ------ inclusion threshold ------
      0.055   13.4   0.7       0.16   11.9   0.1    2.0  2  PF08983.5 Domain of unknown function (DUF1856)
       0.42    9.9   1.6        1.2    8.4   0.0    2.4  3  PF06810.6 Phage minor structural protein GP20


Domain annotation for each model (and alignments):
>> PF10377.4  Autophagy-related protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.0   5.1e-17   1.7e-13      36     127 ..     694     791 ..     684     793 .. 0.86

  Alignments for each domain:
  == domain 1    score: 50.4 bits;  conditional E-value: 5.1e-17
   PF10377.4  36 e.kialknfkvgdlvlflptreqaekkrpwaafnasaprYfLkeessaa....eelktrewavGrivsieecvvke...dkddNpfklsrgtvwYrvkaa 127
                 +  i+ ++f+ +d+vlflp  +++ ++r++ af +++p+ +L++es +     ++ + ++++vG+i+ i+e  +     + + Np+ +++gt++  ++++
  MMETSP1325-20131115|8656_1 694 DmMISWRKFSLNDIVLFLPLPKKT-ENRAYLAFHEGCPHHYLSAESTEWfrkaNKNSYPHYIVGKIILIDELEA-GpigNLTLNPYSIPEGTKFRVLTVE 791
                 348********************8.68*******************987765555556*************999.556689*************999887 PP

>> PF04108.7  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.035   1.2e+02     233     265 ..      77     110 ..      59     115 .. 0.82
   2 !   43.3   0.0   5.6e-15   1.9e-11     290     400 ..     201     317 ..     171     333 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.035
   PF04108.7 233 plseaekdelleVlknDaaelpd.Vvkelqevid 265
                   ++ ++++ll V+++D  e+ d V+++++e+i+
  MMETSP1325-20131115|8656_1  77 RRTARNQKDLLAVVERDYLEVRDhVLAQIREIIS 110
                 55678899*************7659999998875 PP

  == domain 2    score: 43.3 bits;  conditional E-value: 5.6e-15
   PF04108.7 290 satkelleelekvkerlpkylaifadieelleeekesieeyiselseLnefYdkFl......nsYkgLllEverrkavekkvekilkelnekLdklqeedverReqFlaeyGdYlPe 400
                 +  k+l+++++  ++ l++ + ++++ ++++   k +++   ++l + ++ + + +      ++Y+++++Ev+rr+a   +ve++++ +n++L++l++ ++ rRe+Fl+  G +lP 
  MMETSP1325-20131115|8656_1 201 NSAKKLHADVQMRGADLRSRMQAISKLQRSIVTIKSELKLRSEALVQQKRDFGHLElvhelpKAYQAFIQEVQRRRAFGRFVEDLATSTNKELSALRDRETSRRENFLQSTGPFLPP 317
                 5666666666666667777777777777777777776666666666666665443322222289****************************************************5 PP

>> PF08983.5  Domain of unknown function (DUF1856)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.99   3.4e+03      15      26 ..     794     805 ..     793     811 .. 0.77
   2 ?   11.9   0.1   4.8e-05      0.16       3      33 ..     837     868 ..     835     875 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.99
   PF08983.5  15 TlLTkltnrspt 26 
                 T+LT+ ++r+ +
  MMETSP1325-20131115|8656_1 794 TSLTRRNSRRSS 805
                 999998888765 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 4.8e-05
   PF08983.5   3 kkedSDSSl.RRtTlLTkltnrsptnstdawk 33 
                  +  S S + RRtT +T+  n+ ++++ +a+ 
  MMETSP1325-20131115|8656_1 837 GRAASASQCvRRTTEFTRRPNCAISARLGAFN 868
                 5677889999******************9996 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00035       1.2      90     128 ..      74     112 ..      65     115 .. 0.86
   2 ?   -1.4   0.1      0.37   1.3e+03      11      45 ..     213     247 ..     203     272 .. 0.68
   3 ?   -2.1   0.0      0.62   2.1e+03      36      49 ..     372     386 ..     370     391 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00035
   PF06810.6  90 alkkakaknakavkalldkdklkldddglkGLdeqieaL 128
                 a +   a+n+k+++a+ ++d l++ d  l ++ e i+a 
  MMETSP1325-20131115|8656_1  74 ATARRTARNQKDLLAVVERDYLEVRDHVLAQIREIISAS 112
                 445567****************************99875 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.37
   PF06810.6  11 kgkdiqeeKskldkaeeeldslkeqlkerdkqied 45 
                 +g+d+++  + ++k +  + ++k++lk r + + +
  MMETSP1325-20131115|8656_1 213 RGADLRSRMQAISKLQRSIVTIKSELKLRSEALVQ 247
                 55666666666666666666666666666666655 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.62
   PF06810.6  36 lkerdkqiedLkk.k 49 
                 ++erd+++++L++ k
  MMETSP1325-20131115|8656_1 372 IDERDDDLKELEAfK 386
                 789*******99744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1051 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.47u 0.32s 00:00:01.79 Elapsed: 00:00:00.68
# Mc/sec: 3703.78
//
Query:       MMETSP1325-20131115|8660_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 746.04
//
Query:       MMETSP1325-20131115|8664_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00039   20.0   0.0    0.00043   19.8   0.0    1.0  1  PF04101.11 Glycosyltransferase family 28 C-terminal domain


Domain annotation for each model (and alignments):
>> PF04101.11  Glycosyltransferase family 28 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   3.1e-08   0.00043      81     162 ..       1      81 [.       1      86 [. 0.90

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 3.1e-08
                 ----HHHHHHTT--EEEE--TT....S-HHHHHHHHHHHHH---EEEE-S..--------THHHCS---S---SSCH..CHHHH CS
  PF04101.11  81 GagtiaellalgkplIlvPlpeaaenhqdnnakelakagagrvllqkelt..pekLeeallelaaekkrlaekskaaaaarfad 162
                 Gagt+a +l+   plI+ P      n+q + a  + k + g++ + + l     +L +a++ + ++ + +a+  ++a + r+++
  MMETSP1325-20131115|8664_1   1 GAGTCAAVLRSSIPLIVTPVLG---NDQFYWAGRVNKLNLGKGFRKQLLRikAAELSKAITTVTTSASVQASVRNMAEKLRQEK 81 
                 9*********************...9********************99987789**************9999998875555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       664  (0.0485664); expected 273.4 (0.02)
Passed bias filter:                      572  (0.0418373); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 449.93
//
Query:       MMETSP1325-20131115|8662_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 1338.83
//
Query:       MMETSP1325-20131115|8665_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 249.62
//
Query:       MMETSP1325-20131115|8666_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 522.41
//
Query:       MMETSP1325-20131115|8667_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 364.06
//
Query:       MMETSP1325-20131115|8668_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.48s 00:00:00.77 Elapsed: 00:00:00.57
# Mc/sec: 400.77
//
Query:       MMETSP1325-20131115|8669_1  [L=293]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1789  (0.130851); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.99u 0.40s 00:00:01.39 Elapsed: 00:00:00.70
# Mc/sec: 1003.05
//
Query:       MMETSP1325-20131115|8673_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-07   30.1   0.0    2.1e-07   30.0   0.0    1.0  1  PF04801.8 Sin-like protein conserved region


Domain annotation for each model (and alignments):
>> PF04801.8  Sin-like protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   1.5e-11   2.1e-07     340     417 ..       1      78 [.       1      82 [. 0.96

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 1.5e-11
   PF04801.8 340 dyiLlqFtksdaltrsevaaatklssedvkeiLesvakkreakrrwelklptdkeFekkhpevvkrqeakWeasreel 417
                 d+iL ++++   + r  + aa  l+s+++ + Le++a+k +  r w lk p d  Fe  + ++ ++q a+W a+  el
  MMETSP1325-20131115|8673_1   1 DVILALLARDGLVYRRALVAALPLPSHQLLKALETFAVKDKRGRCWVLKRPVDSTFELTYCDTANEQAAFWAARSGEL 78 
                 899***********************************9999*****************************9998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 459.30
//
Query:       MMETSP1325-20131115|8676_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|8677_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.052   13.4   0.6      0.093   12.6   0.4    1.4  1  PF00040.14 Fibronectin type II domain
      0.094   12.3   0.0        0.1   12.1   0.0    1.0  1  PF08719.6  Domain of unknown function (DUF1768)


Domain annotation for each model (and alignments):
>> PF00040.14  Fibronectin type II domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.4   1.4e-05     0.093       4      19 ..      29      44 ..      27      50 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.4e-05
  PF00040.14  4 PFvykgktyssCtseg 19
                PF+++g +y+sC ++ 
  MMETSP1325-20131115|8677_1 29 PFEFEGVKYYSCEQAY 44
                ************8765 PP

>> PF08719.6  Domain of unknown function (DUF1768)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.5e-05       0.1      11      40 ..      20      49 ..      13      54 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.5e-05
   PF08719.6 11 gilSnlypspftvdgvkfptaehymqaqKa 40
                ++  n+  +pf+++gvk+ + e+++ a K+
  MMETSP1325-20131115|8677_1 20 ACTDNFQVRPFEFEGVKYYSCEQAYHAYKF 49
                56679999*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|8678_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00063   18.7   0.0       0.02   14.0   0.0    2.4  2  PF00036.27 EF hand
    0.00083   18.9   0.1     0.0063   16.1   0.0    2.2  2  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.013   15.5   0.0       0.02   14.9   0.0    1.3  1  PF13499.1  EF-hand domain pair
      0.023   13.9   0.4       0.17   11.1   0.1    2.2  2  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   5.8e-06      0.02       5      27 ..      92     114 ..      90     116 .. 0.91
   2 ?    2.3   0.0     0.033   1.1e+02       4      23 ..     137     156 ..     134     157 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 5.8e-06
                 HHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfkealk 27 
                 +F+  D+D +G+++  E+++al 
  MMETSP1325-20131115|8678_1  92 WFDFWDRDSSGTLDRRELINALG 114
                 799****************9985 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.033
                 HHHHHHCTTTSSEBEHHHHH CS
  PF00036.27   4 eaFkefDkDgdGkIsfeEfk 23 
                  ++++  +  +G I++ Ef+
  MMETSP1325-20131115|8678_1 137 MLMAMCETGSSGAITKGEFL 156
                 56666667789********7 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.9e-06    0.0063       6      27 ..      93     114 ..      91     122 .. 0.93
   2 ?   -0.4   0.0       0.4   1.4e+03      14      23 ..     147     156 ..     143     157 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.9e-06
                 -GCC-------B---HHHHHHH CS
   PF13405.1   6 FklfDkdgdGkidaeELrdaLr 27 
                 F+  D+d +G++d+ EL++aL 
  MMETSP1325-20131115|8678_1  93 FDFWDRDSSGTLDRRELINALG 114
                 99******************97 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.4
                 ---B---HHH CS
   PF13405.1  14 dGkidaeELr 23 
                 +G i++ E++
  MMETSP1325-20131115|8678_1 147 SGAITKGEFL 156
                 89****9995 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   5.7e-06      0.02       6      63 ..      93     156 ..      63     157 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 5.7e-06
   PF13499.1   6 FkllDkdgdgyldkeeLlrllkhlgsels......deevrevldyifkelDkngdGvlsfeEfl 63 
                 F+  D+d +g+ld+ eL ++l +++          +   + ++d ++++  +  +G ++  Efl
  MMETSP1325-20131115|8678_1  93 FDFWDRDSSGTLDRRELINALGATLRRVQgegspdRPTCELQVDMLMAMCETGSSGAITKGEFL 156
                 8889*****************9999877765555544444499999999999999999999997 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   4.9e-05      0.17       4      23 ..      92     111 ..      89     114 .. 0.84
   2 ?    0.1   0.0      0.16   5.3e+02      13      21 ..     147     155 ..     146     157 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.9e-05
                 HHHHH--S----B-HHHHHH CS
   PF13202.1   4 tFrafDlNgDGkIsreELkr 23 
                 +F+  D + +G+++r EL +
  MMETSP1325-20131115|8678_1  92 WFDFWDRDSSGTLDRRELIN 111
                 78888************965 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.16
                 ---B-HHHH CS
   PF13202.1  13 DGkIsreEL 21 
                 +G I++ E+
  MMETSP1325-20131115|8678_1 147 SGAITKGEF 155
                 79******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       954  (0.0697776); expected 273.4 (0.02)
Passed bias filter:                      483  (0.0353277); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.53
# Mc/sec: 831.94
//
Query:       MMETSP1325-20131115|8679_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|8681_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-05   23.3   0.1      3e-05   23.1   0.0    1.1  1  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   2.2e-09     3e-05     213     251 ..       1      43 [.       1      44 [. 0.85

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 2.2e-09
  PF01504.13 213 lkKkleslvksllklk.g...kdisvvsPkeYakRFlkfieki 251
                 +kK+les++k+ +++  g     is+v+++ Ya+RF++f++++
  MMETSP1325-20131115|8681_1   1 MKKRLESAYKTRMQTLaGkdpTLISAVDSSVYAQRFVNFMTDH 43 
                 68*********99887555556788999************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|8680_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00013   21.5   0.1       0.15   11.9   0.0    2.3  2  PF01535.15 PPR repeat
    0.00015   21.5   0.0      0.028   14.2   0.0    2.2  2  PF13041.1  PPR repeat family
     0.0023   17.9   0.0       0.84    9.9   0.0    2.6  2  PF13812.1  Pentatricopeptide repeat domain
  ------ inclusion threshold ------
      0.056   12.8   0.3        4.1    6.8   0.0    2.4  2  PF12854.2  PPR repeat


Domain annotation for each model (and alignments):
>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0012         4      17      30 ..     142     155 ..     140     156 .. 0.91
   2 !   11.9   0.0   4.5e-05      0.15       2      27 ..     162     187 ..     161     190 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0012
  PF01535.15  17 eeAlelfkeMkekG 30 
                 ++Al l++eM+ kG
  MMETSP1325-20131115|8680_1 142 RKALALLDEMRVKG 155
                 69*********999 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 4.5e-05
  PF01535.15   2 tynslIsgyckaGkleeAlelfkeMk 27 
                 + n+ I+++  +G++eeAl+l+++++
  MMETSP1325-20131115|8680_1 162 SLNAAIKCCEDSGLVEEALRLMQDLR 187
                 67999****************99876 PP

>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   8.2e-06     0.028      20      48 ..     142     170 ..     136     172 .. 0.93
   2 !   11.0   0.0   8.3e-05      0.28       5      29 ..     162     186 ..     159     193 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 8.2e-06
   PF13041.1  20 eeAfklfneMkkrgikPnvyTYsilikgl 48 
                 ++A+ l++eM+ +g +P+v + +  ik++
  MMETSP1325-20131115|8680_1 142 RKALALLDEMRVKGYEPSVRSLNAAIKCC 170
                 68************************986 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 8.3e-05
   PF13041.1   5 tYNtlIsglckkgkveeAfklfneM 29 
                 + N+ I+++ + g veeA++l+++ 
  MMETSP1325-20131115|8680_1 162 SLNAAIKCCEDSGLVEEALRLMQDL 186
                 679*******************997 PP

>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0072        24      19      34 .]     143     158 ..     131     158 .. 0.78
   2 !    9.9   0.0   0.00024      0.84       1      27 [.     160     186 ..     160     190 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0072
   PF13812.1  19 aAlalleeMeqqgvkP 34 
                 +Alall+eM+ +g +P
  MMETSP1325-20131115|8680_1 143 KALALLDEMRVKGYEP 158
                 49********998776 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00024
   PF13812.1   1 vetyntlitalaksgrpeaAlalleeM 27 
                 v+++n+ i+++  sg +e+Al+l+ ++
  MMETSP1325-20131115|8680_1 160 VRSLNAAIKCCEDSGLVEEALRLMQDL 186
                 689*******************98876 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.011        36      25      34 .]     143     152 ..     142     152 .. 0.91
   2 ?    6.8   0.0    0.0012       4.1       1      31 [.     154     184 ..     154     187 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.011
   PF12854.2  25 eAvelldeMe 34 
                 +A+ lldeM+
  MMETSP1325-20131115|8680_1 143 KALALLDEMR 152
                 79*******7 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0012
   PF12854.2   1 kGlkPdvvTYNtLIdGlCraGrvdeAvelld 31 
                 kG++P v + N  I+    +G+v+eA++l+ 
  MMETSP1325-20131115|8680_1 154 KGYEPSVRSLNAAIKCCEDSGLVEEALRLMQ 184
                 68999999999999999999*********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1061.24
//
Query:       MMETSP1325-20131115|8683_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-18   67.5   0.2      1e-18   67.4   0.1    1.0  1  PF01988.14 VIT family


Domain annotation for each model (and alignments):
>> PF01988.14  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.1   7.6e-23     1e-18      23     110 ..       3      90 ..       1      96 [] 0.93

  Alignments for each domain:
  == domain 1    score: 67.4 bits;  conditional E-value: 7.6e-23
  PF01988.14  23 lagaaassklvllaGlaglvAgaiSmalGeylsvkaerdleeaelereqqeverspegeveeladilkakglseetaaqvaeeltake 110
                 + ga+  +++v+ +G+a lvA+a+Sm++G+yls+kae+d    e +r + e ++ p   +e+l++ + +kg+s ++aa +++ ++++e
  MMETSP1325-20131115|8683_1   3 VCGANMGPRTVISMGVASLVADAFSMGMGDYLSEKAEQDFALVEHKRVETETRSTPAVVKEKLVQSYVEKGVSAKDAATIVNTMSKYE 90 
                 55666689***************************************************************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 426.02
//
Query:       MMETSP1325-20131115|8685_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-08   34.5   1.4      2e-08   33.8   0.5    1.9  1  PF05499.7  DNA methyltransferase 1-associated protein 1 (DMAP1)
  ------ inclusion threshold ------
      0.032   14.0   3.4       0.31   10.9   0.4    2.7  3  PF07334.8  Interferon-induced 35 kDa protein (IFP 35) N-terminus
      0.063   13.4   1.2        6.1    7.0   0.2    2.1  2  PF08232.7  Striatin family
       0.21   11.3   2.6       0.47   10.2   0.1    2.0  2  PF11559.3  Afadin- and alpha -actinin-Binding
       0.25   11.2   2.1        3.6    7.4   0.1    2.1  2  PF06818.10 Fez1
          3    7.7  12.6        1.4    8.8   3.1    2.2  2  PF06112.6  Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF05499.7  DNA methyltransferase 1-associated protein 1 (DMAP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.5     9e-12     2e-08      87     169 ..      81     167 ..       7     175 .. 0.84

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 9e-12
   PF05499.7  87 aGvslr.sqklklPan...vGqkkvkaleqvleelkvdlnPvpteeivkvfnelrsdlvLlyeLkqalatcefelesLkhryealak 169
                 +Gv +r s +l  P +   + ++ +  ++ vl e+kv   P+pt  ++  +++lr d+v l  L++ +++ e +l++L++r  +++ 
  MMETSP1325-20131115|8685_1  81 SGVPFRqSCRLDAPVEkpgLSKQLIEKMNMVLGECKVPERPIPTRTVCDLYDQLRRDVVTLLSLRKTVSKIEADLQALRNRPAEVVA 167
                 66766634566666532224556688999***************************************************9877654 PP

>> PF07334.8  Interferon-induced 35 kDa protein (IFP 35) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.4   0.00014      0.31       7      31 ..       6      30 ..       3      37 .. 0.89
   2 ?   -1.8   0.0       1.2   2.8e+03      46      61 ..      95     110 ..      91     120 .. 0.72
   3 ?    2.5   0.0     0.057   1.3e+02      12      27 ..     144     159 ..     141     165 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00014
   PF07334.8  7 kenirLkeeiqkLeaELQelkrefq 31
                ke++ Lkee++++e EL + +++ q
  MMETSP1325-20131115|8685_1  6 KEETVLKEELKQVEGELRKVRKTLQ 30
                89999****************9987 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.2
   PF07334.8  46 vEvPeddsqlsnvsks 61 
                 vE P+  +ql +    
  MMETSP1325-20131115|8685_1  95 VEKPGLSKQLIEKMNM 110
                 7999999998765555 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.057
   PF07334.8  12 LkeeiqkLeaELQelk 27 
                 L + + k+ea+LQ l+
  MMETSP1325-20131115|8685_1 144 LRKTVSKIEADLQALR 159
                 889999*******875 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.2    0.0027       6.1      42     104 ..       2      64 ..       1      78 [. 0.64
   2 ?    5.4   0.0    0.0083        19      45      93 ..     138     183 ..     125     204 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0027
   PF08232.7  42 rglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaeeeeleekkdeesess 104
                 r  e+ ++ Lk+++k++e +l++ r+ l+   a++ +  + +s+ssa++ + + +   +s++ 
  MMETSP1325-20131115|8685_1   2 RAHEKEETVLKEELKQVEGELRKVRKTLQGRPAKSGKAGAAASSSSASAGAASMTGLTASQAA 64 
                 566788899*****************9998555544444444444444444444443333333 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0083
   PF08232.7  45 enlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaeeeel 93 
                   +  +L+++v+++e+ l+  r++  ++ a++++ ++ + +  ++   +
  MMETSP1325-20131115|8685_1 138 VVTLLSLRKTVSKIEADLQALRNRPAEVVAQQAAAQAAQAARGSN---K 183
                 55556899999****999999999888666655553222222222...2 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.2      0.14   3.1e+02     101     125 ..       6      30 ..       1      37 [. 0.57
   2 ?   10.2   0.1    0.0002      0.47      39      86 ..     126     173 ..     124     184 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.14
   PF11559.3 101 kklktleqklknekeelqrlkniiq 125
                 k+ + l++ lk+   el++ ++++q
  MMETSP1325-20131115|8685_1   6 KEETVLKEELKQVEGELRKVRKTLQ 30 
                 4444555556666666666665555 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.0002
   PF11559.3  39 viysLlqqrdrdleqresleetlrkleaeierlqskierlktqleqle 86 
                 ++ +L  q++rd+ +  sl +t++k+ea+++ l+++ + +  q ++ +
  MMETSP1325-20131115|8685_1 126 TVCDLYDQLRRDVVTLLSLRKTVSKIEADLQALRNRPAEVVAQQAAAQ 173
                 5778899999*********************99999888886666555 PP

>> PF06818.10  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0016       3.6      78     112 ..       4      38 ..       1      83 [. 0.70
   2 ?    3.7   0.1     0.021        48      74     110 ..     133     169 ..     124     195 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0016
  PF06818.10  78 kkseaellrekagrleaelaelrealasagtlked 112
                 + +e+ +l+e+++++e el+++r++l+   +++++
  MMETSP1325-20131115|8685_1   4 HEKEETVLKEELKQVEGELRKVRKTLQGRPAKSGK 38 
                 6789999****************999887333333 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.021
  PF06818.10  74 eLqrkkseaellrekagrleaelaelrealasagtlk 110
                  L+r       lr+ ++++ea+l+ lr+++a+  +++
  MMETSP1325-20131115|8685_1 133 QLRRDVVTLLSLRKTVSKIEADLQALRNRPAEVVAQQ 169
                 5666666666778888888888888888887763222 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   3.1   0.00062       1.4     101     140 ..      28      69 ..      15      76 .. 0.73
   2 ?    4.1   0.8     0.017        40      91     123 ..     172     214 ..     129     222 .] 0.44

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00062
   PF06112.6 101 gvpggaalSsssvsalsSgpss..lsssssesssdasagdta 140
                 +++g++a S+    a+sS+++s   +s++++++s+a a+d a
  MMETSP1325-20131115|8685_1  28 TLQGRPAKSGKAGAAASSSSASagAASMTGLTASQAAAADAA 69 
                 678888888888777766655411466688888888888766 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.017
   PF06112.6  91 alsassssasgvpggaa............lSsssvsalsSgpssl 123
                 a  a+  +a g + ga+            +S++ + a++  ++ +
  MMETSP1325-20131115|8685_1 172 AQAAQ--AARGSNKGAGgdskkrkappavASGGVAAAAAAAAGAG 214
                 11111..22222222222222223333334444444444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       865  (0.063268); expected 273.4 (0.02)
Passed bias filter:                      489  (0.0357665); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.62
# Mc/sec: 858.05
//
Query:       MMETSP1325-20131115|8687_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-27   94.6   0.8    4.9e-27   94.3   0.5    1.0  1  PF01167.13 Tub family


Domain annotation for each model (and alignments):
>> PF01167.13  Tub family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.5   3.6e-31   4.9e-27     153     246 .]       7     103 ..       2     103 .. 0.90

  Alignments for each domain:
  == domain 1    score: 94.3 bits;  conditional E-value: 3.6e-31
  PF01167.13 153 qeslleeeqkkkkesllvLknkaPrWneelqsyvLnf.rGrvtvasvknfqlvaasepd..kivlqfGkvakdvftmDyryPlsalqafaiclssfd 246
                 ++ ++++ +kk+++++++   k+P++ne+ q++vL+f   rvt+as+knfqlv + + d  +  +qfGk+ kd f +D+ +P+ ++qafai+lssfd
  MMETSP1325-20131115|8687_1   7 KNDMISDFKKKQTDDIMLSTSKSPVFNEKRQAWVLDFiDKRVTKASIKNFQLVSTADVDqqNPFFQFGKTDKDEFILDFMWPMGPMQAFAIALSSFD 103
                 45588999*****************************4579************98655511679********************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 765.89
//
Query:       MMETSP1325-20131115|8689_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 391.71
//
Query:       MMETSP1325-20131115|8686_1  [L=440]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-20   73.1  24.3    2.1e-20   72.9  16.8    1.1  1  PF00003.17 7 transmembrane sweet-taste receptor of 3 GCPR


Domain annotation for each model (and alignments):
>> PF00003.17  7 transmembrane sweet-taste receptor of 3 GCPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.9  16.8   1.6e-24   2.1e-20       6     238 .]       5     236 ..       1     236 [. 0.78

  Alignments for each domain:
  == domain 1    score: 72.9 bits;  conditional E-value: 1.6e-24
  PF00003.17   6 tvlvvvvfvryrntplvkassr.elsfllLlglllcflstflflgeptdalCalrrfllglgfalcfsallvktvrivrifkakkakaprlkslpksqllivllltlvqviictvwlvldppepekdts.vekakiileCk.egsdlalilvlgydilLllicfvlAfkarklpenFneakyitfsmlvfcii.wlafiplylstrgk.iqvavlafallasssvlLlcifiPKvyii 238
                 ++++++v++ yr+++++  ss   + f++L+g++ + +s+  fl++pt+a C+l ++l++l   l++ +l++k +r+++i k +++ ++r+++    ql+ +l+++   v++++ + + + p   ++ +  +++  ++ Ck +    + ++v +  + L l + +lA +++k+   Fne+++i+f++++f+++ +l+ + +yl t++  ++ ++ ++   ++++v+ ++i++PK ++i
  MMETSP1325-20131115|8686_1   5 FSCLAIVLY-YRSHKVMIFSSYkFIIFMILMGITASAGSF--FLAQPTNAGCMLFNWLVYLPQMLMYCTLFAKVFRVWFILKDAQRLKTRVMT--EMQLVHILCVMTAAVVLVVSLGAYFNPL-RRKEEiSQDTYLYEVCKgKLGHFSNWIVGAAFLTLFLGGAFLAHETKKFTTIFNESRWIAFAIYNFMFLaLLSRFLIYLQTKDVrMTYVLRVLEQCITTTVTTIVIVLPKYHLI 236
                 667777777.666666665555377788888887777764..6899************************************99998887776..5555555555555555555555555552.333443677778888*755677778899999999*******************************9866266778899999998577777789999**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       657  (0.0480544); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.39s 00:00:01.17 Elapsed: 00:00:00.60
# Mc/sec: 1757.33
//
Query:       MMETSP1325-20131115|8692_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 356.90
//
Query:       MMETSP1325-20131115|8693_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|8694_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       572  (0.0418373); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 859.56
//
Query:       MMETSP1325-20131115|8696_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.08   13.2   6.7       0.19   12.1   1.9    2.1  2  PF11365.3  Protein of unknown function (DUF3166)
       0.14   11.9  11.5       0.11   12.3   5.3    2.1  2  PF08647.6  BRE1 E3 ubiquitin ligase
       0.23    9.7   5.6       0.24    9.6   3.9    1.1  1  PF03961.8  Protein of unknown function (DUF342)
       0.25   11.0   9.4        1.7    8.3   0.5    2.8  3  PF00631.17 GGL domain
       0.26   10.1   3.2       0.39    9.5   1.9    1.4  1  PF11262.3  Transcription factor/nuclear export subunit protein 2
       0.31   10.7   3.5        0.3   10.8   0.9    1.9  2  PF05121.7  Gas vesicle protein K
       0.41   10.4  14.4        0.9    9.3  10.0    1.6  1  PF14265.1  Domain of unknown function (DUF4355)
       0.55   10.0  12.1       0.64    9.7   3.3    2.1  2  PF11559.3  Afadin- and alpha -actinin-Binding
       0.65   10.0   3.9       0.64   10.0   1.0    1.9  2  PF11338.3  Protein of unknown function (DUF3140)
       0.89    8.8  10.6        1.1    8.5   7.3    1.0  1  PF10123.4  Mu-like prophage I protein
       0.94    8.5   8.9        1.1    8.3   6.2    1.0  1  PF05929.6  Phage capsid scaffolding protein (GPO) serine peptidase
        1.2    8.8   6.4       0.86    9.3   2.4    1.8  2  PF03885.8  Protein of unknown function (DUF327)
        1.3    8.8   9.1       0.74    9.6   0.6    2.3  2  PF14282.1  FlxA-like protein
        1.6    7.6   9.7        1.9    7.3   6.7    1.1  1  PF13206.1  Trypanosomal VSG domain
        1.8    8.5   5.7        5.3    7.0   0.1    2.4  2  PF13655.1  N-terminal domain of reverse transcriptase
          2    7.8   9.6        7.6    5.9   6.7    1.8  1  PF04156.9  IncA protein
        2.1    8.5   7.6          4    7.6   4.7    1.8  2  PF03131.12 bZIP Maf transcription factor
        2.5    8.0   7.9        1.1    9.2   2.7    2.0  2  PF04569.9  Protein of unknown function
        3.2    7.6   6.0        3.9    7.4   1.9    2.1  2  PF02318.11 Rabphilin-3A effector domain N-terminal
        3.3    7.3   7.9       0.79    9.3   0.1    2.9  3  PF02183.13 Homeobox associated leucine zipper
        4.3    5.2  10.0       0.17    9.9   1.2    1.9  2  PF11336.3  Protein of unknown function (DUF3138)
        4.5    5.4   7.9        5.5    5.1   5.5    1.1  1  PF04632.7  Fusaric acid resistance protein family
        5.1    7.4   9.4        2.6    8.3   0.6    3.0  3  PF04102.7  SlyX
        5.4    7.4   6.6        3.3    8.1   2.9    1.7  2  PF03955.9  Adenovirus hexon-associated protein (IX)
        5.9    5.6  11.1        7.1    5.3   7.7    1.1  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        6.8    6.1  12.4       0.46    9.8   1.1    2.7  2  PF04977.10 Septum formation initiator
        7.7    6.1   7.5        1.8    8.2   0.7    2.1  2  PF08286.6  Spc24 subunit of Ndc80
        7.9    5.9  10.7         14    5.2   7.4    1.5  1  PF03962.10 Mnd1 family
        8.8    5.6  10.7         13    5.0   6.8    1.7  2  PF05529.7  B-cell receptor-associated protein 31-like
        8.9    6.2  12.1         34    4.3   3.2    2.4  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        9.4    6.0   9.8        3.9    7.3   4.0    1.8  2  PF10814.3  Protein of unknown function (DUF2562)


Domain annotation for each model (and alignments):
>> PF11365.3  Protein of unknown function (DUF3166)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.9   0.00042      0.19      34      87 ..      15      67 ..       1      76 [. 0.79
   2 ?    6.5   3.6     0.023        10      28      87 ..      30      67 ..      22     116 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00042
   PF11365.3 34 veeELqkyksayGdldsvaelaaGapdttreaelklrLklveeeanilsrkive 87
                 + E+ +++  +  l+  ++ ++Ga++  + ++l  +Lk +e    + +r++v 
  MMETSP1325-20131115|8696_1 15 DTAEVTRLRKLVTKLQ-ESKASDGAAEIQKYKALAQQLKKSEAAEAERGRQVVS 67
                4679999999999998.89999******************99988888988874 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.023
   PF11365.3 28 ekEkdkveeELqkyksayGdldsvaelaaGapdttreaelklrLklveeeanilsrkive 87
                +                       ++ ++Ga++  + ++l  +Lk +e    + +r++v 
  MMETSP1325-20131115|8696_1 30 Q----------------------ESKASDGAAEIQKYKALAQQLKKSEAAEAERGRQVVS 67
                3......................3444566666666666666666666555555555542 PP

>> PF08647.6  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.83   3.7e+02      59      74 ..      17      32 ..       6      39 .. 0.72
   2 ?   12.3   5.3   0.00024      0.11       4      72 ..      40     105 ..      37     111 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.83
   PF08647.6 59 aElkkLntqlsKssel 74
                aE+ +L+++++K +e+
  MMETSP1325-20131115|8696_1 17 AEVTRLRKLVTKLQES 32
                6777777777776664 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.00024
   PF08647.6   4 ELvslekafkelselalkkvaeltileqkklrltaekakadqkyfaamrskdaldaElkkLntqlsKss 72 
                 E++++++ +++l+   ++ +ae+++  q ++rl+aeka + +k   ++ +  a++ ++ kL++ l +++
  MMETSP1325-20131115|8696_1  40 EIQKYKALAQQLK---KSEAAEAERGRQVVSRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTR 105
                 5555555544444...45678*****************************************9999876 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.9   0.00055      0.24     333     409 ..      23      98 ..       3     117 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00055
   PF03961.8 333 keklkeleeeleel.eeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeeleskk 409
                 ++ +++l+e   +   +e++k+k+  ++l+k++a +   ++ ++ + +l+++k   +++   l++el++++e++++ +
  MMETSP1325-20131115|8696_1  23 RKLVTKLQESKASDgAAEIQKYKALAQQLKKSEAAE--AERGRQVVSRLEAEKATEMSKGDRLKQELAAMQEQVAKLS 98 
                 333344444444446777777777777777744433..4666677777777775555555555555555555555542 PP

>> PF00631.17  GGL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0084       3.7       6      40 ..       9      44 ..       6      50 .. 0.90
   2 ?    0.2   0.2       1.3   5.8e+02       9      28 ..      52      72 ..      45      80 .. 0.44
   3 ?    8.3   0.5    0.0038       1.7       4      31 ..      82     110 ..      79     112 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0084
  PF00631.17  6 kqlklklkreieqLkkeLer.erikvSkackelidY 40
                ++ k+  + e+++L+k + + +  k+S  ++e+++Y
  MMETSP1325-20131115|8696_1  9 QARKQGDTAEVTRLRKLVTKlQESKASDGAAEIQKY 44
                567788889***********9**************9 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 1.3
  PF00631.17  9 klklkreieqLkkeLer.eri 28
                k+    e e+ ++ ++r e  
  MMETSP1325-20131115|8696_1 52 KKSEAAEAERGRQVVSRlEAE 72
                333333444433333333333 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0038
  PF00631.17   4 rikqlklklkreieqLkkeLereri.kvS 31 
                 r kq+ +++++++++L ++L+r+r   +S
  MMETSP1325-20131115|8696_1  82 RLKQELAAMQEQVAKLSSDLARTRTaAMS 110
                 6789999***************9885666 PP

>> PF11262.3  Transcription factor/nuclear export subunit protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.9   0.00089      0.39      31      91 ..      17      77 ..      12      95 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00089
   PF11262.3 31 keiekleseikeskkakiekkkrelkriknrikkLeeekkehiehtekiksrLkeekkswf 91
                +e+++l++ +++ +++k++    e++++k+  ++L++ + ++ e+  ++ srL+ ek + +
  MMETSP1325-20131115|8696_1 17 AEVTRLRKLVTKLQESKASDGAAEIQKYKALAQQLKKSEAAEAERGRQVVSRLEAEKATEM 77
                689999999999999***************************************9998755 PP

>> PF05121.7  Gas vesicle protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       2.2   9.8e+02      42      68 ..      28      54 ..      18      61 .. 0.61
   2 ?   10.8   0.9   0.00068       0.3      32      67 ..      63      99 ..      58     105 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 2.2
   PF05121.7 42 sLseeeierlgesLqkLeeeleelkeq 68
                +L+e++  + + ++qk ++  ++lk++
  MMETSP1325-20131115|8696_1 28 KLQESKASDGAAEIQKYKALAQQLKKS 54
                455555555566666666666666555 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00068
   PF05121.7 32 rqairrmeegsLse.eeierlgesLqkLeeeleelke 67
                rq++ r+e+++ +e ++ +rl ++L +++e++ +l +
  MMETSP1325-20131115|8696_1 63 RQVVSRLEAEKATEmSKGDRLKQELAAMQEQVAKLSS 99
                8**********9994578***************9986 PP

>> PF14265.1  Domain of unknown function (DUF4355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  10.0     0.002       0.9      15      69 ..      45     105 ..       9     112 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.002
   PF14265.1  15 kaiakekakwekeqqek......keeaeklakmsaeekaekeleklkkeleelkaelarre 69 
                 ka+a++++k e+  +e         eaek  +ms+ ++ ++el +++++ ++l ++lar+ 
  MMETSP1325-20131115|8696_1  45 KALAQQLKKSEAAEAERgrqvvsRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTR 105
                 4444444444443333356678999********************************9976 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   2.3     0.098        43      60     102 ..      11      54 ..       2      61 .. 0.67
   2 ?    9.7   3.3    0.0014      0.64      49     101 ..      54     106 ..      50     114 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.098
   PF11559.3  60 tlrkleaeierlqskierlk.tqleqlerelallqekerqlekk 102
                 + +  +ae  rl++ + +l+  + ++ + e++ +++  +ql+k+
  MMETSP1325-20131115|8696_1  11 RKQGDTAEVTRLRKLVTKLQeSKASDGAAEIQKYKALAQQLKKS 54 
                 44556677777777777777556677777777777777777765 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.0014
   PF11559.3  49 rdleqresleetlrkleaeierlqskierlktqleqlerelallqekerqlek 101
                  ++++ e   + +++leae++   sk +rlk++l++ + ++a l ++ +  ++
  MMETSP1325-20131115|8696_1  54 SEAAEAERGRQVVSRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTRT 106
                 55566666677788999999999999999999999999999988888877665 PP

>> PF11338.3  Protein of unknown function (DUF3140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0       1.4   6.4e+02      24      51 ..       6      33 ..       3      46 .. 0.67
   2 ?   10.0   1.0    0.0014      0.64      26      78 ..      48     106 ..      40     119 .] 0.78

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 1.4
   PF11338.3 24 svgekkdggesvghesGrriveilekrk 51
                + g+ +++g+++     r++v+ l+  k
  MMETSP1325-20131115|8696_1  6 ELGQARKQGDTAEVTRLRKLVTKLQESK 33
                5577777777777777777776666443 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.0014
   PF11338.3  26 gekkdggesvghesGrriveile......krksdltdddvehMrkvvgyvkrhlaqkep 78 
                 +++ +++e++  e Gr++v+ le        k d  ++++++M++ v + ++ la+ + 
  MMETSP1325-20131115|8696_1  48 AQQLKKSEAAEAERGRQVVSRLEaekateMSKGDRLKQELAAMQEQVAKLSSDLARTRT 106
                 566667999***********9998877767788889999**********9999998433 PP

>> PF10123.4  Mu-like prophage I protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   7.3    0.0025       1.1     160     253 ..       7     113 ..       3     117 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0025
   PF10123.4 160 Lglaaaateea.......alaalaeaalaalaalataaakldeqkeqlaaltakkan....evdlakyvpvetlqalkaelaaleaklaeaev..ealvdaAlkeGk 253
                 Lg a +++++a       ++++l+e+++++ aa+ +++++l++q ++++a++a+       +  ++k +++++ ++lk+elaa++++ a+ +   +++ +aA++ Gk
  MMETSP1325-20131115|8696_1   7 LGQARKQGDTAevtrlrkLVTKLQESKASDGAAEIQKYKALAQQLKKSEAAEAERGRqvvsRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSdlARTRTAAMSRGK 113
                 55555555555556666666777777777777777777777777777777777444466778999999999999999999999999999876644777888888887 PP

>> PF05929.6  Phage capsid scaffolding protein (GPO) serine peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   6.2    0.0025       1.1     168     264 ..      11     107 ..       3     116 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0025
   PF05929.6 168 eetvvaallekvkellkkkeasddarfadvgeaveavaehvqekleatekrlseaekalseleqalaskadelakelaelkesLdktddlaqqarpk 264
                 +++  +a ++++++l++k ++s++   a   +  +a+a++ ++ ++a  +r  +   +l + +    sk d+l++ela+++e++ k ++    +r+ 
  MMETSP1325-20131115|8696_1  11 RKQGDTAEVTRLRKLVTKLQESKASDGAAEIQKYKALAQQLKKSEAAEAERGRQVVSRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTRTA 107
                 55556777889999998888887555444444578999999977666666666677777666665569**************999987766556655 PP

>> PF03885.8  Protein of unknown function (DUF327)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.4      0.43   1.9e+02      38      77 ..      12      50 ..       4      54 .. 0.56
   2 ?    9.3   2.4     0.002      0.86      11      65 ..      47     107 ..      39     109 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.43
                HHHHH...HHHHHHHHHHHH---HHHHH--HHHHHHHHHHHHH CS
   PF03885.8 38 kekse...eeLkelldeieeagerLeesrtlenlkkYKklvke 77
                k+  +   ++L++l+++++e+    + s   ++++kYK l ++
  MMETSP1325-20131115|8696_1 12 KQGDTaevTRLRKLVTKLQES----KASDGAAEIQKYKALAQQ 50
                444442235555555555555....456667777777776655 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.002
                 .....-------------HHHHH.HHHHHHHHH.....HHHHHHHHHHHH---HHHHH--H CS
   PF03885.8  11 kkktkkkskkkeskesksFsevl.eeeekekse.....eeLkelldeieeagerLeesrtl 65 
                   ++ kks++ e+++  +  + l +e+ +e+s+     +eL+++++++ +  ++L+++rt 
  MMETSP1325-20131115|8696_1  47 LAQQLKKSEAAEAERGRQVVSRLeAEKATEMSKgdrlkQELAAMQEQVAKLSSDLARTRTA 107
                 33444555555556667778888566666666688888********************996 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   1.6       0.2        89      28      62 ..      19      53 ..       9      68 .. 0.73
   2 ?    9.6   0.6    0.0017      0.74      17      45 ..      76     104 ..      64     116 .. 0.61

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.2
   PF14282.1 28 iqsltkqlkelssdeeltaeekqkqqqliqqQIqa 62
                ++ l k +++l+++++++     ++ +++ qQ+++
  MMETSP1325-20131115|8696_1 19 VTRLRKLVTKLQESKASDGAAEIQKYKALAQQLKK 53
                56677777777777777766666777777777654 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0017
   PF14282.1  17 sdsqiksLqkqiqsltkqlkelssdeelt 45 
                 + s+  +L+++++ +++q+ +lssd + t
  MMETSP1325-20131115|8696_1  76 EMSKGDRLKQELAAMQEQVAKLSSDLART 104
                 34555667777777777777777663333 PP

>> PF13206.1  Trypanosomal VSG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.7    0.0044       1.9      51     148 ..      18     111 ..       3     118 .. 0.70

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0044
   PF13206.1  51 daeeilalnlsvadaewlkkfdeetddetwgekkkkkak.......akWkaaakalkk.kake..........keekkssnsslstaakqkakqlaekAaklkeeiektrtkalaa 148
                 +++++ +l+  +++++                      +       +k+ka a++lkk +a+e           e +k++++s+ ++ kq+++++ e++akl +++  trt+a + 
  MMETSP1325-20131115|8696_1  18 EVTRLRKLVTKLQESK----------------------AsdgaaeiQKYKALAQQLKKsEAAEaergrqvvsrLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTRTAAMSR 111
                 4444444444444444......................01222345667777777777555546666677777899999*******************************999776 PP

>> PF13655.1  N-terminal domain of reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1     0.012       5.3      22      47 ..       9      34 ..       5      36 .. 0.91
   2 ?    3.3   1.1      0.17        77      28      62 ..      40      74 ..      34     102 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.012
   PF13655.1 22 kAskkgdvkkvkklqklLlksfsakl 47
                +A k+gd+ +v +l kl +k ++ k+
  MMETSP1325-20131115|8696_1  9 QARKQGDTAEVTRLRKLVTKLQESKA 34
                89*****************9998885 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.17
   PF13655.1 28 dvkkvkklqklLlksfsakllAvrrVtqdnkgkkt 62
                +++k k+l ++L ks +a +   r+V+++ + +k 
  MMETSP1325-20131115|8696_1 40 EIQKYKALAQQLKKSEAAEAERGRQVVSRLEAEKA 74
                688999***********999999999885543332 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   6.7     0.017       7.6      66     112 ..      47     102 ..       4     111 .. 0.55

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.017
   PF04156.9  66 vqseedekiee..........srlqeelsesesqlseleeeleqleerlaelesele 112
                   +  ++++ +          srl++e++ + s  ++l +el +++e++a+l+s+l 
  MMETSP1325-20131115|8696_1  47 LAQQLKKSE-AaeaergrqvvSRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLA 102
                 222111111.12344444455666666666666666666666666666666665554 PP

>> PF03131.12  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.4       1.4   6.1e+02      64      83 ..      14      33 ..       2      53 .. 0.47
   2 ?    7.6   4.7    0.0091         4      25      89 ..      38     100 ..      17     107 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 1.4
  PF03131.12 64 elaqeveklkeevarlarer 83
                  ++ev +l++ v++l++ +
  MMETSP1325-20131115|8696_1 14 GDTAEVTRLRKLVTKLQESK 33
                33445555555555444332 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0091
  PF03131.12  25 keevvrlkqrrrtlknrGyaqsCrvkrvqqkeelekekselaqeveklkeevarlarerdalkek 89 
                   e+++ k   + lk    a++ r ++v  +  le+ek++++++ ++lk+e a+++++   l + 
  MMETSP1325-20131115|8696_1  38 AAEIQKYKALAQQLKKSEAAEAERGRQVVSR--LEAEKATEMSKGDRLKQELAAMQEQVAKLSSD 100
                 5689999999999999999999999999865..9999******************9987777665 PP

>> PF04569.9  Protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1       1.3   5.9e+02      67      80 ..      10      23 ..       8      37 .. 0.80
   2 ?    9.2   2.7    0.0025       1.1      14      76 ..      53     117 ..      42     118 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 1.3
   PF04569.9 67 arkgGngdgatrgr 80
                ark G + ++tr r
  MMETSP1325-20131115|8696_1 10 ARKQGDTAEVTRLR 23
                88999999999855 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0025
   PF04569.9  14 grrtaaaeggarrgdtgkgeh.tGlargtrgdeptarirrreldg.gglRRRqpAarkgGngdga 76 
                 ++++a ae+g+++ ++ + e+ t + +g+r  ++ a ++ + ++  + l R + Aa  +G+ d++
  MMETSP1325-20131115|8696_1  53 KSEAAEAERGRQVVSRLEAEKaTEMSKGDRLKQELAAMQEQVAKLsSDLARTRTAAMSRGKSDRK 117
                 56778889999999887777658*********************989***************986 PP

>> PF02318.11  Rabphilin-3A effector domain N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.66   2.9e+02      64      82 ..      14      32 ..       6      39 .. 0.78
   2 ?    7.4   1.9    0.0089       3.9      44      86 ..      52      94 ..      33     100 .. 0.76

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.66
  PF02318.11 64 lealeqeriGrlvdrLekl 82
                 ++ e  r+ +lv +L++ 
  MMETSP1325-20131115|8696_1 14 GDTAEVTRLRKLVTKLQES 32
                4778999999999999765 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0089
  PF02318.11 44 eslteeekeiikkviaraeklealeqeriGrlvdrLeklrknv 86
                ++ +++e e  ++v+ r e  +a+e  +  rl ++L  ++++v
  MMETSP1325-20131115|8696_1 52 KKSEAAEAERGRQVVSRLEAEKATEMSKGDRLKQELAAMQEQV 94
                3335677888899999999999999999999999999999887 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1      0.32   1.4e+02      26      40 ..      17      31 ..      16      35 .. 0.79
   2 ?   -2.0   0.1       6.1   2.7e+03      21      27 ..      44      50 ..      39      55 .. 0.49
   3 ?    9.3   0.1    0.0018      0.79      22      42 ..      81     101 ..      77     108 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.32
  PF02183.13 26 kEkekLraevlsLke 40
                +E+ +Lr++v++L+e
  MMETSP1325-20131115|8696_1 17 AEVTRLRKLVTKLQE 31
                578889999988886 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 6.1
  PF02183.13 21 ndsLqkE 27
                +++L ++
  MMETSP1325-20131115|8696_1 44 YKALAQQ 50
                2333332 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.0018
  PF02183.13  22 dsLqkEkekLraevlsLkekl 42 
                 d+L++E ++++ +v++L++ l
  MMETSP1325-20131115|8696_1  81 DRLKQELAAMQEQVAKLSSDL 101
                 677777777777777777655 PP

>> PF11336.3  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   1.1      0.34   1.5e+02      20      71 ..      12      51 ..       2      66 .. 0.47
   2 ?    9.9   1.2   0.00038      0.17      18      59 ..      71     112 ..      64     118 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.34
   PF11336.3 20 aaskaeqikalqaqlaalqqqvkelraalaakpaaagggakiqsaaaaaaaa 71
                ++ +++++ +l++ +++lq+  +              g+a+iq+ +a a   
  MMETSP1325-20131115|8696_1 12 KQGDTAEVTRLRKLVTKLQESKASD------------GAAEIQKYKALAQQL 51
                4455555555555555555433322............223333333333332 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00038
   PF11336.3  18 aaaaskaeqikalqaqlaalqqqvkelraalaakpaaaggga 59 
                 a +a++ ++  +l+++laa+q+qv++l + la  ++aa    
  MMETSP1325-20131115|8696_1  71 AEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTRTAAMSRG 112
                 456777888899******************998887775443 PP

>> PF04632.7  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.5     0.013       5.5     250     322 ..      19     108 ..       2     117 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.013
   PF04632.7 250 ppelaalldelaa.................alaaeeleaavaaLrarlaalrpeaeadsdtaaallarlaellaeladalaalralqaai 322
                 +  l++l+ +l++                 ++  + ++a++++ r+ + +l++e +++ +  ++l ++la+  +++a ++++l++ + a+
  MMETSP1325-20131115|8696_1  19 VTRLRKLVTKLQEskasdgaaeiqkykalaQQLKKSEAAEAERGRQVVSRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTRTAA 108
                 222555555555555333332222222222122223344444444444444444446666666666666666666666666666655544 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.58   2.6e+02      39      55 ..      20      36 ..       6      43 .. 0.64
   2 ?    1.9   0.2      0.61   2.7e+02      40      56 ..      43      59 ..      38      68 .. 0.73
   3 ?    8.3   0.6    0.0058       2.6      31      54 ..      84     107 ..      65     117 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.58
   PF04102.7 39 rqlrllaerlkeleess 55
                 +lr l+ +l+e ++s 
  MMETSP1325-20131115|8696_1 20 TRLRKLVTKLQESKASD 36
                35677777777777443 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.61
   PF04102.7 40 qlrllaerlkeleessn 56
                + ++la++lk+ e+ + 
  MMETSP1325-20131115|8696_1 43 KYKALAQQLKKSEAAEA 59
                67899999999885543 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0058
   PF04102.7  31 qkeidrlqrqlrllaerlkelees 54 
                 ++e++++q+q++ l++ l   ++ 
  MMETSP1325-20131115|8696_1  84 KQELAAMQEQVAKLSSDLARTRTA 107
                 577777777777777777777733 PP

>> PF03955.9  Adenovirus hexon-associated protein (IX)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.3      0.61   2.7e+02      61     100 ..      27      52 ..       2      57 .. 0.36
   2 ?    8.1   2.9    0.0074       3.3      41     102 ..      42     104 ..      35     109 .. 0.63

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.61
   PF03955.9  61 tsaaaatarslaeeveslselkskvsaleekltvllaeLe 100
                 t  ++++a + a+e               +k ++l ++L+
  MMETSP1325-20131115|8696_1  27 TKLQESKASDGAAE--------------IQKYKALAQQLK 52 
                 11122222222222..............333333333333 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0074
   PF03955.9  41 ltyatvssstldtaaaaaastsaaaatars.laeeveslselkskvsaleekltvllaeLeel 102
                  +y+ ++++ ++++aa+a++ ++ ++ ++   a+e+++ + lk++++a++e+++ l   L++ 
  MMETSP1325-20131115|8696_1  42 QKYKALAQQLKKSEAAEAERGRQVVSRLEAeKATEMSKGDRLKQELAAMQEQVAKLSSDLART 104
                 578888888888888888866666655443134445555666666666666666666666654 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   7.7     0.016       7.1      72     162 ..      19     107 ..       3     118 .. 0.42

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.016
   PF10186.4  72 ieqirkrieqlkeeieqk.rerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtk.sklnslesltaekRsqlcrelaklfplrrv 162
                   ++rk + +l+e   ++  ++i++ k+  +q++++       e++r +q+ + +e+ k t+ sk + l++++a++++q+ ++   l + r +
  MMETSP1325-20131115|8696_1  19 VTRLRKLVTKLQESKASDgAAEIQKYKALAQQLKKS----EAAEAERGRQVVSRLEAEKATEmSKGDRLKQELAAMQEQVAKLSSDLARTRTA 107
                 334444444444333322023333333333332222....23444444444444444444430333335555555555555555555554444 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   3.1      0.68     3e+02      36      62 ..      37      63 ..       6      65 .. 0.73
   2 ?    9.8   1.1    0.0011      0.46      14      56 ..      61     103 ..      59     111 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.68
  PF04977.10 36 lkaeneeLeaevkdLksdedyieeqAR 62
                  ae+++ +a  ++Lk++e++ +e+ R
  MMETSP1325-20131115|8696_1 37 GAAEIQKYKALAQQLKKSEAAEAERGR 63
                457788888888888777777666666 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.0011
  PF04977.10  14 sgllalyqlkqeiaalqaelaklkaeneeLeaevkdLksdedy 56 
                 +g + +++l++e a+   + ++lk+e ++++++v++L+sd ++
  MMETSP1325-20131115|8696_1  61 RGRQVVSRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLAR 103
                 6777789999***************************888766 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.5      0.32   1.4e+02      11      45 ..      22      57 ..      10      67 .. 0.51
   2 ?    8.2   0.7     0.004       1.8       2      44 ..      67     109 ..      66     118 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.32
   PF08286.6 11 lakelndl.eselenlqseleelkeeleeleeqene 45
                l k +++l es+ +   +e+++ k+  ++l+++e  
  MMETSP1325-20131115|8696_1 22 LRKLVTKLqESKASDGAAEIQKYKALAQQLKKSEAA 57
                333333331233444455555555555555555544 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.004
   PF08286.6   2 eeldnekvrlakelndleselenlqseleelkeeleeleeqen 44 
                 ++l+ ek + + + + l++el  +q+++++l + l  + +   
  MMETSP1325-20131115|8696_1  67 SRLEAEKATEMSKGDRLKQELAAMQEQVAKLSSDLARTRTAAM 109
                 689999*************************999988877655 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   7.4     0.031        14      63     127 ..      40     102 ..       7     116 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.031
  PF03962.10  63 akkklkteleklkkeleelkqrikelqaeiekekkkreeteereelleelkeleeelkklkkele 127
                 + +k k  +++lkk ++   +r  ++  ++e+ek++   +    +l +el++++e++ kl+++l+
  MMETSP1325-20131115|8696_1  40 EIQKYKALAQQLKKSEAAEAERGRQVVSRLEAEKATEMSK--GDRLKQELAAMQEQVAKLSSDLA 102
                 3445555555666666666666666666666665555555..33455666666666666666665 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.5      0.27   1.2e+02     154     175 ..      11      36 ..       3      50 .. 0.45
   2 ?    5.0   6.8      0.03        13     120     187 ..      23      98 ..      17     109 .. 0.44

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.27
   PF05529.7 154 kekklkeeveklkkelee....kekd 175
                  ++++++ev++l+k + +    k +d
  MMETSP1325-20131115|8696_1  11 RKQGDTAEVTRLRKLVTKlqesKASD 36 
                 44555555555555555433332222 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.03
   PF05529.7 120 vtlvselvkleeklealkkqaesatkaakkl...............keekekklkeeveklkkeleekekdlealkkqaeglq 187
                  +lv++l + +++  a++ q+ +a +++ k                 e++++++ ++ ++lk       ++l+a+++q+++l+
  MMETSP1325-20131115|8696_1  23 RKLVTKLQESKASDGAAEIQKYKALAQQLKKseaaeaergrqvvsrLEAEKATEMSKGDRLK-------QELAAMQEQVAKLS 98 
                 44555555444444444444433333322222222222333334444444444444444444.......45555555555444 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   3.2     0.077        34      53      92 ..      20      60 ..       3      71 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.077
                HHHHHHGGGTTT...HHCCCHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17 53 NelskeIgkakkkk.edaeeliaevkelkeelkaleaelke 92
                 +l k + k+ ++k  d ++ i++ k+l+++lk+ ea+++e
  MMETSP1325-20131115|8696_1 20 TRLRKLVTKLQESKaSDGAAEIQKYKALAQQLKKSEAAEAE 60
                45667777777777778888899999999999999998876 PP

>> PF10814.3  Protein of unknown function (DUF2562)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   2.3      0.79   3.5e+02      39      91 ..      12      64 ..       3      74 .. 0.75
   2 ?    7.3   4.0    0.0087       3.9      33      86 ..      52     109 ..      46     118 .. 0.70

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.79
   PF10814.3 39 elrrryregklarelaaaqetlaqelaaaqevvanlPealqearrkrrrkkrp 91
                + ++  + ++l++ ++  qe+ a++ aa  +   +l + l+++ +++  + r+
  MMETSP1325-20131115|8696_1 12 KQGDTAEVTRLRKLVTKLQESKASDGAAEIQKYKALAQQLKKSEAAEAERGRQ 64
                44555566788888889999999999999999999999999886665554443 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0087
   PF10814.3  33 arstaael.rrryregklarelaa...aqetlaqelaaaqevvanlPealqearrkrr 86 
                  +s aae+ r r   ++l+ e a+     + l qelaa qe va+l   l  +r++  
  MMETSP1325-20131115|8696_1  52 KKSEAAEAeRGRQVVSRLEAEKATemsKGDRLKQELAAMQEQVAKLSSDLARTRTAAM 109
                 5666666515577788998877651114578****************99988876544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1597  (0.116808); expected 273.4 (0.02)
Passed bias filter:                      779  (0.0569778); expected 273.4 (0.02)
Passed Vit filter:                       112  (0.00819193); expected 13.7 (0.001)
Passed Fwd filter:                        31  (0.00226741); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              31  [number of targets reported over threshold]
# CPU time: 0.67u 0.42s 00:00:01.09 Elapsed: 00:00:00.60
# Mc/sec: 475.28
//
Query:       MMETSP1325-20131115|8691_1  [L=597]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-25   89.1   0.1    7.8e-25   87.3   0.1    1.7  1  PF00648.16 Calpain family cysteine protease


Domain annotation for each model (and alignments):
>> PF00648.16  Calpain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.3   0.1   5.7e-29   7.8e-25      47     295 ..     117     393 ..      95     396 .. 0.69

  Alignments for each domain:
  == domain 1    score: 87.3 bits;  conditional E-value: 5.7e-29
                 GEB------HHHHHHHHHHT.TSHHHHHHHS-SS--SSTT----EEEEEE-..-.--.......EEEEEE-S-EEE.----BSSSBE----B-HHHHHHHHHHHH---GGGG----TT......HHHCTT--....--EEEEETTS--T...THHHHHHHHHH---.....BB--B---SSGGGTT-BTTTS-BSS---EE---EEEEB---EEEEEEEE------------STTSGGGG.....GS-HHHHHHHTTSS-.---EEEEHHHHHHH-CEEEEE CS
  PF00648.16  47 dicqGalGdcWllaaiaslt.lneellkrvvpkdqslkenyaGifhfrlwr..y.Ge.......WvdvvvddllPt.kdgelvfvksaerkefWsallekayaklnGsyealkgGstt......ealedltG....gvaeslelkkaps.ednlakilaklleras.....llgasidtssavdeeaktakglvkghaysvtgvkevelkgekvklirlrnPWGeveWkGaWsdesseWs.....evdeeekaelqlkveedGefWmsfedflrefsrleic 295
                 +  qG +GdcW++++ia+++  + e +++    +    +  a if +rl+   y G+       W+ v++d ++    +g+  f++s   +  W++lleka+ak   sy  l + +          +e l G    +  +s+e++++     +la i +  +   +     ++++ + t +     +++  glv+gh y+++g   ++     ++l+rlrnPW e+eW+G+W+d+ ++Ws     ev  ++ a    + ++d +f+m    f ++fs  ++c
  MMETSP1325-20131115|8691_1 117 ENVQGGMGDCWFVSSIAAVAaMRPEAIEEAFASNSG--DAEADIFTVRLFDcdYhGKyergshgWMYVLLDGQIAAnAQGRACFMHSRGGECGWVPLLEKAFAKCCTSYGGLCSPQWFpcrdppGVMEMLIGpegrATGHSFEVEDETWqYIELACINRWPMCASCdghiwVDNKIAVTRDKHGGVDHKRLGLVPGHGYALVGCVALSN---GERLVRLRNPWEEYEWTGDWCDSDPRWSsqfldEVAASDTAGGPIRNANDSVFFMPLAAFRKYFSGGDVC 393
                 668*************98862578899998854443..33478999998642222323334456********9998689*********************************99875411111134677766332233455666544431223333333222222244443222222222333344567789**********9987765...689************************7331112334444445578899****************99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (597 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.34s 00:00:01.22 Elapsed: 00:00:00.57
# Mc/sec: 2466.60
//
Query:       MMETSP1325-20131115|8698_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 877.07
//
Query:       MMETSP1325-20131115|8700_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 657.82
//
Query:       MMETSP1325-20131115|8695_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.55
# Mc/sec: 182.99
//
Query:       MMETSP1325-20131115|8699_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        52  (0.00380339); expected 273.4 (0.02)
Passed bias filter:                       52  (0.00380339); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.64
# Mc/sec: 123.56
//
Query:       MMETSP1325-20131115|8702_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 312.99
//
Query:       MMETSP1325-20131115|8704_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0073   15.3   0.2     0.0081   15.1   0.1    1.2  1  PF03039.9 Interleukin-12 alpha subunit
  ------ inclusion threshold ------
      0.023   14.4   0.1      0.026   14.2   0.1    1.0  1  PF06495.6 Fruit fly transformer protein


Domain annotation for each model (and alignments):
>> PF03039.9  Interleukin-12 alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   1.2e-06    0.0081      26      66 ..       9      49 ..       2      77 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.2e-06
   PF03039.9 26 pastagpavakclnlsqnllktvddalkkakekleyyscta 66
                p st+  +  + l++s+n ++t+++ ++ a++ l  y+ + 
  MMETSP1325-20131115|8704_1  9 PSSTNCSTRRRGLSESRNTVSTISESVQVANQELSLYTTSD 49
                5677777779***************************9765 PP

>> PF06495.6  Fruit fly transformer protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   3.8e-06     0.026      92     168 ..      10      80 ..       4      87 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.8e-06
   PF06495.6  92 ssssterrrrsrsrsrysrtPkiitvyvqvPaadysyaygwpppapqlsamygalpygrlprPlpPyfapyarppap 168
                 ss+ ++ rrr  s sr  +t   i+  vqv  ++ s  y+     p   a++ al+     r   P+++  ar  a+
  MMETSP1325-20131115|8704_1  10 SSTNCSTRRRGLSESR--NTVSTISESVQVANQELS-LYT--TSDPSSXALHCALSRTLSVRC-VPWISAAARKTAT 80 
                 5678899*********..7888999**********4.566..567788899999999999998.6777888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 435.26
//
Query:       MMETSP1325-20131115|8707_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.6    8.2   6.1       0.17   12.0   0.5    1.8  2  PF12210.3 Hepatocyte growth factor-regulated tyrosine kinase substrate


Domain annotation for each model (and alignments):
>> PF12210.3  Hepatocyte growth factor-regulated tyrosine kinase substrate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.5   1.3e-05      0.17      53      87 ..       3      38 ..       1      42 [. 0.86
   2 ?   -2.7   0.4      0.48   6.6e+03      72      88 ..      61      77 ..      57      85 .. 0.47

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.3e-05
   PF12210.3 53 eeldekrlkyeglqdkLaqikdaRaaldel.Reehr 87
                 +l+e+r   e++  +L  + +aR al+e  R++h 
  MMETSP1325-20131115|8707_1  3 LQLEEQRDNVESVLARLQLLVEARRALEERgRHNHD 38
                589************************974366665 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.48
   PF12210.3 72 ikdaRaaldelReehre 88
                 ++aR a     ++h+ 
  MMETSP1325-20131115|8707_1 61 TREARDARPREVAHHEV 77
                45555554443333433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 867.05
//
Query:       MMETSP1325-20131115|8703_1  [L=336]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-15   53.9   0.0    1.4e-14   53.2   0.0    1.2  1  PF00282.14 Pyridoxal-dependent decarboxylase conserved domain
    6.3e-05   21.9   0.0    0.00032   19.6   0.0    1.8  2  PF00155.16 Aminotransferase class I and II
    7.9e-05   21.4   0.0     0.0012   17.5   0.0    2.1  1  PF00266.14 Aminotransferase class-V


Domain annotation for each model (and alignments):
>> PF00282.14  Pyridoxal-dependent decarboxylase conserved domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   0.0     3e-18   1.4e-14     139     370 ..      10     236 ..       2     238 .. 0.88

  Alignments for each domain:
  == domain 1    score: 53.2 bits;  conditional E-value: 3e-18
                 -S-EEEEEETTS-CHHHHHHHHTT-EEEEE--B-TTB--S-HHHHHHHHHHCT..EEEEEEEE---TTT-----CCCHHHHHHCT--EEEEE-S---.GGGCHHHGC..........GCTTSTTECEEEE-HHHHSS--SS-EEEEESSCCGS-GGG---B----.........--B----S--S-.TTCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCSTTEEECST----EEEE CS
  PF00282.14 139 ldklvlytsdqahssvekaakiagvelrlipldenfkllgkdlekaieedkekGliplfvvatlGttvsgafddlkelgdicekydlwlHvDAAyaGsalicpefrh..........llkgieradSislnphKlllvlldcsalwvkdkeaLqkalqvnpeYLkhedkdsdvavdlkdwqinlsr.rfrilklwlvlrslGveglqnvirksvelakyleelvrkdsrfeivaerelglVcF 370
                 + ++ + + + ah ++ ka+ ++g++l+ +p+d+    ++ d+ +a+ ++  + +++ ++   +    +g +d++ el+ ++   ++ lHvD   +G  +i p+ ++          +++g++ + S+s+  hK++ +  + s+++++d +  + +   +p++ +           + + +i+ sr     +  w  l +lG eg+    ++ +e    l+++v+k    +i  e++  + cF
  MMETSP1325-20131115|8703_1  10 ITQPEIIACPTAHAAIDKACDLMGIKLIKVPMDPVT--CMIDM-NAVTRALSA-DTI-MIYSSAPNFPNGIIDPIAELSALALARGVGLHVDCCLGG--FILPFAKKlnlpgvdipdFDFGLPGVTSMSVDTHKYGYASKGTSVVLYRDAKLRKYQYFAYPDWTG---------GLYVTPTIAGSRpGALTAACWASLATLGEEGFMDNTKQIIECRLRLQKEVEKIDGIFILGEPQAMILCF 236
                 66788899999**********************944..33344.455555555.355.56677778899****************************..******9999999999999*******************************9988888878888888.........6688999*****999999*************************************99999999999999 PP

>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   7.1e-08   0.00032      95     187 ..      14      96 ..       8     108 .. 0.89
   2 ?   -0.4   0.0     0.084   3.8e+02     253     308 ..     178     234 ..     170     240 .. 0.73

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 7.1e-08
                 EEEEECS--TCHHHHHHH---EEEEEE-EETTTTEE-HHHHHHHHTT--SS-E...EEE-SSS-S-------HHHHHHHHHHHHHTT-EEEEE CS
  PF00155.16  95 eilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvvlvesphNPtGtvatleeleklldlakkynlllfvD 187
                 ei+++   +a +++++ l+g++++++p  ++ ++ +d++a+ +al+        t +++   p+ P G + + +el +l   a ++++ l vD
  MMETSP1325-20131115|8703_1  14 EIIACPTAHAAIDKACDLMGIKLIKVP-MDPVTCMIDMNAVTRALSA------DTIMIYSSAPNFPNGIIDPIAELSAL---ALARGVGLHVD 96 
                 7999***********************.669***************9......788**********************9...55556655555 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.084
                 -----CCHHHHCTSHHHHHHHHHHHHHHHHHHHHHHHHCC.CC.-TCHHHH----EE CS
  PF00155.16 253 ssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLael.glkvlasqsgmfl 308
                 s +++  +a ++s a l ++ + ++ +++++ r +l +e +++ g+ +l+++ +m+l
  MMETSP1325-20131115|8703_1 178 SRPGALTAACWASLATLGEEGFMDNTKQIIECRLRLQKEVEKIdGIFILGEPQAMIL 234
                 5566666666666666666788899999999999******99997777777777765 PP

>> PF00266.14  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.6e-07    0.0012     104     332 ..      24     254 ..      12     275 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 2.6e-07
                 HHHHHHHH---EEEEE-B--.---B-GGGHHHH--TTEEEEEEESB-S----B--HHHHHHHHHH---EEEEE---S....TTTS-.....--HHHHT-SE.......EE-----.---------EEE-HHHHHH----------EEE--S---EE--TTGGG---------------HHHHHHH---HHHHHHHHHHHHHHHHHHTTSTT-EEE--...TT----EEEE-----TTT---HHHH-- CS
  PF00266.14 104 pwqelakrtgakvkvipvde.egsldldeleklltpktklvaithvsnvtGvvqpveeiaklakeagalvvvDaaqa....vghip.....idvkklgvDf.......lafSgHK.llgPtGiGvlyvrrellekleplklggemveevsleettfaeapskfeaGTpniagiiglgaaleyleeigleaiekhekelaeylyerLsalpgvellgpakaerrasivsfafkgveaedvatlLderg 332
                 ++ ++++  g k+ ++p+d+    +d+++++ +l+ +t +++ ++ +   G+++p++e+ +la ++g+ ++vD + +        +     +d+ +++  f       +++ +HK  ++ +G++v+  r++ l k+       ++++ ++  +  + ++     aG+++ a   ++ a l  l e g+    k+  e + +l+++ ++++g+ +lg    e +a i++f  +++    v+ l+ +rg
  MMETSP1325-20131115|8703_1  24 AIDKACDLMGIKLIKVPMDPvTCMIDMNAVTRALSADTIMIYSSAPNFPNGIIDPIAELSALALARGVGLHVDCCLGgfilPFAKKlnlpgVDIPDFD--FglpgvtsMSVDTHKyGYASKGTSVVLYRDAKLRKY-------QYFAYPDWTGGLYVTPTI---AGSRPGALTAACWASLATLGEEGFMDNTKQIIECRLRLQKEVEKIDGIFILG----EPQAMILCFGSNEFPVLNVGDLMSKRG 254
                 45788888899999999998346899************99999999999************************8755221112223111113444432..2333332277779**99*************999999.......455555556666555555...9******************999999999999*******************99....678888888877777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.40s 00:00:01.06 Elapsed: 00:00:00.62
# Mc/sec: 1298.67
//
Query:       MMETSP1325-20131115|8701_1  [L=440]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-13   49.0  16.0    5.2e-06   26.1   0.0    5.5  5  PF13424.1  Tetratricopeptide repeat
    4.2e-08   32.3  11.4       0.28   11.0   0.0    6.8  7  PF07719.12 Tetratricopeptide repeat
    1.9e-05   24.1   8.0       0.02   14.3   1.5    4.1  4  PF13414.1  TPR repeat
    0.00011   21.6  11.4       0.16   11.7   0.0    6.1  7  PF13176.1  Tetratricopeptide repeat
    0.00028   20.2   5.8       0.62    9.6   0.0    5.3  6  PF00515.23 Tetratricopeptide repeat
    0.00034   20.2  17.6       0.73    9.7   0.1    6.6  8  PF13374.1  Tetratricopeptide repeat
     0.0061   16.8   3.5        7.8    7.0   0.1    5.3  6  PF13174.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.018   15.0   2.6        1.2    9.1   0.1    2.9  2  PF03206.9  Nitrogen fixation protein NifW
       0.15   12.6  25.5        8.1    7.2   0.2    7.9  8  PF13428.1  Tetratricopeptide repeat
       0.19   10.7  16.0       0.04   13.0   1.9    3.2  3  PF03050.9  Transposase IS66 family


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.4    0.0063       8.6       7      59 ..       7      58 ..       3      74 .. 0.84
   2 !   26.1   0.0   3.8e-09   5.2e-06      21      76 ..     138     194 ..     136     196 .. 0.95
   3 ?    5.5   0.1      0.01        14       5      34 ..     206     235 ..     203     244 .. 0.73
   4 ?    4.9   0.2     0.016        22      17      44 ..     298     328 ..     285     335 .. 0.69
   5 !   14.0   0.2   2.4e-05     0.033       4      44 ..     333     374 ..     330     383 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0063
   PF13424.1  7 ilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylal 59
                +l   +++l + g++++A+ ++ +     +  ++ ++   +++++ +a+ y+++
  MMETSP1325-20131115|8701_1  7 LLLLEGQMLSHTGRLEDAERILLRTQHElA--ARAESISACSCYTTIAEMYVQK 58
                66778999************9999886634..4566777899999999999875 PP

  == domain 2    score: 26.1 bits;  conditional E-value: 3.8e-09
   PF13424.1  21 ydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                 +d+A+e++ +  e+  + +g++h  ta + + l+nl++   d+++A+++++ A+ei+
  MMETSP1325-20131115|8701_1 138 FDKAEEYLLRIWEIhEQAFGRNHVGTAASCLSLGNLCVINSDLAQAKQWFKSAIEIF 194
                 89************88788************************************97 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.01
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalel 34 
                 a++  +l++v  +lg+  +A +++ +a e 
  MMETSP1325-20131115|8701_1 206 AATEAQLGHVEAKLGRRSRAVAHISRAAEH 235
                 556667888888888888888888888876 PP

  == domain 4    score: 4.9 bits;  conditional E-value: 0.016
   PF13424.1  17 rlgdydeAlelyekalel.lrel..gddhpd 44 
                  ++d ++A + ye+al+  ++ +  g+++++
  MMETSP1325-20131115|8701_1 298 DEQDPQRACNAYEQALNAiAAMQgqGEASAE 328
                 6788999999999999996666522444444 PP

  == domain 5    score: 14.0 bits;  conditional E-value: 2.4e-05
   PF13424.1   4 latilnnlalvlrrlgdydeAlelyekalel.lrelgddhpd 44 
                 l ++l   +++l++ g++ +A++ y +  +l  r+lg  h  
  MMETSP1325-20131115|8701_1 333 LLHALRAFGQALEKAGKWRKAETTYSQLKTLtSRLLGKGHKA 374
                 5689999************************88899988754 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.14   1.9e+02       3      22 ..       7      26 ..       5      30 .. 0.85
   2 ?   -0.4   0.0      0.97   1.3e+03      16      26 ..     137     147 ..     136     148 .. 0.82
   3 !    6.5   0.0    0.0057       7.8       4      31 ..     167     194 ..     164     196 .. 0.88
   4 !    6.5   0.1    0.0059         8       6      31 ..     211     236 ..     209     238 .. 0.92
   5 !   11.0   0.0   0.00021      0.28       3      28 ..     288     313 ..     286     315 .. 0.93
   6 ?   -0.6   0.0       1.1   1.5e+03      18      29 ..     327     338 ..     321     341 .. 0.85
   7 !    6.8   0.1    0.0047       6.5       3      27 ..     336     360 ..     334     365 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.14
                HHHHHHHHHHHTT-HHHHHH CS
  PF07719.12  3 alynlGlayyklgdyeeAle 22
                +l + G+ + + g++e+A++
  MMETSP1325-20131115|8701_1  7 LLLLEGQMLSHTGRLEDAER 26
                67889*************87 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.97
                 -HHHHHHHHHH CS
  PF07719.12  16 dyeeAleafek 26 
                 ++++A+e++ +
  MMETSP1325-20131115|8701_1 137 HFDKAEEYLLR 147
                 799**999875 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.0057
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAleld 31 
                 +  lG+++  + d+++A+++f+ A+e++
  MMETSP1325-20131115|8701_1 167 CLSLGNLCVINSDLAQAKQWFKSAIEIF 194
                 6679999999***************986 PP

  == domain 4    score: 6.5 bits;  conditional E-value: 0.0059
                 HHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAleld 31 
                 +lG + +klg+  +A+++  +A e++
  MMETSP1325-20131115|8701_1 211 QLGHVEAKLGRRSRAVAHISRAAEHY 236
                 58999*****************9986 PP

  == domain 5    score: 11.0 bits;  conditional E-value: 0.00021
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAl 28 
                 ++++ G++++  +d+++A +a+e+Al
  MMETSP1325-20131115|8701_1 288 LWMECGKIWIDEQDPQRACNAYEQAL 313
                 79999********************9 PP

  == domain 6    score: -0.6 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHH CS
  PF07719.12  18 eeAleafekAle 29 
                 +eAl+++  Al+
  MMETSP1325-20131115|8701_1 327 AEALKLLLHALR 338
                 799999999997 PP

  == domain 7    score: 6.8 bits;  conditional E-value: 0.0047
                 HHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekA 27 
                 al + G+a++k+g++ +A+  + + 
  MMETSP1325-20131115|8701_1 336 ALRAFGQALEKAGKWRKAETTYSQL 360
                 567779************9999875 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.97   1.3e+03       5      26 ..       7      28 ..       4      31 .. 0.82
   2 ?   -2.7   0.0       3.1   4.2e+03      19      31 ..     138     150 ..     136     154 .. 0.66
   3 !    9.8   0.1   0.00039      0.53       4      65 ..     165     233 ..     163     237 .. 0.79
   4 !   14.3   1.5   1.5e-05      0.02       5      63 ..     288     359 ..     284     364 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.97
   PF13414.1  5 alkelGnalfkegdydeAieay 26
                 l  +G++l + g++++A++ +
  MMETSP1325-20131115|8701_1  7 LLLLEGQMLSHTGRLEDAERIL 28
                678899***********99866 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 3.1
   PF13414.1  19 ydeAieayekAle 31 
                 +d+A+e++ +  e
  MMETSP1325-20131115|8701_1 138 FDKAEEYLLRIWE 150
                 6777777766555 PP

  == domain 3    score: 9.8 bits;  conditional E-value: 0.00039
   PF13414.1   4 ealkelGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAledyekAl 65 
                  +   lGn +  + d+++A + ++ A+e+           +a   ++l+++  klg+ + +A++++++A 
  MMETSP1325-20131115|8701_1 165 ASCLSLGNLCVINSDLAQAKQWFKSAIEIFdhvygccmQVTAATEAQLGHVEAKLGR-RSRAVAHISRAA 233
                 556789999999****************972233333233577*************5.799*****9996 PP

  == domain 4    score: 14.3 bits;  conditional E-value: 1.5e-05
   PF13414.1   5 alkelGnalfkegdydeAieayekAleld.......pnnae.......lyynlAlaylklgkdyeeAledyek 63 
                  + e G   + e+d++ A+ aye+Al          + +ae       ++ + ++a++k gk +++A + y++
  MMETSP1325-20131115|8701_1 288 LWMECGKIWIDEQDPQRACNAYEQALNAIaamqgqgEASAEalklllhALRAFGQALEKAGK-WRKAETTYSQ 359
                 688899999*****************973344444455666889996677777********6.79***99987 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.8   2.5e+03       6      24 ..      12      30 ..      12      38 .. 0.83
   2 ?   -2.6   0.0       4.3   5.8e+03      11      31 ..      63      81 ..      47      85 .. 0.53
   3 ?   -0.2   0.0      0.75     1e+03      15      24 ..     138     147 ..     137     159 .. 0.76
   4 ?    0.3   0.0       0.5   6.8e+02       1      26 [.     166     191 ..     166     197 .. 0.82
   5 ?    2.3   0.0      0.12   1.6e+02       4      22 ..     211     229 ..     210     241 .. 0.86
   6 !   11.7   0.0   0.00011      0.16       6      29 ..     293     317 ..     288     340 .. 0.89
   7 !    8.4   0.1    0.0013       1.8       6      30 ..     341     365 ..     336     371 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.8
   PF13176.1  6 arlysrlgdyekAielyer 24
                +++ s  g+ e+A++++ r
  MMETSP1325-20131115|8701_1 12 GQMLSHTGRLEDAERILLR 30
                57788899999**998876 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 4.3
   PF13176.1 11 rlgdyekAielyeraLaltkd 31
                r+++ e+A e  e    l++d
  MMETSP1325-20131115|8701_1 63 RQQRGERAKESAED--WLASD 81
                35555666555555..55555 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.75
   PF13176.1  15 yekAielyer 24 
                 ++kA+e++ r
  MMETSP1325-20131115|8701_1 138 FDKAEEYLLR 147
                 89*****988 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.5
   PF13176.1   1 allnLarlysrlgdyekAielyeraL 26 
                 ++l L++l++   d  +A + ++ a+
  MMETSP1325-20131115|8701_1 166 SCLSLGNLCVINSDLAQAKQWFKSAI 191
                 6899*****99999999988888744 PP

  == domain 5    score: 2.3 bits;  conditional E-value: 0.12
   PF13176.1   4 nLarlysrlgdyekAiely 22 
                 +L+++  +lg++++A+ + 
  MMETSP1325-20131115|8701_1 211 QLGHVEAKLGRRSRAVAHI 229
                 699999*********9875 PP

  == domain 6    score: 11.7 bits;  conditional E-value: 0.00011
   PF13176.1   6 arlysrlgdyekAielyeraL.alt 29 
                 ++++ + +d ++A ++ye+aL a++
  MMETSP1325-20131115|8701_1 293 GKIWIDEQDPQRACNAYEQALnAIA 317
                 89*****************998886 PP

  == domain 7    score: 8.4 bits;  conditional E-value: 0.0013
   PF13176.1   6 arlysrlgdyekAielyeraLaltk 30 
                 +++ ++ g+++kA++ y ++  lt+
  MMETSP1325-20131115|8701_1 341 GQALEKAGKWRKAETTYSQLKTLTS 365
                 899**************88446665 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.7   2.3e+03       8      21 ..      12      25 ..       6      26 .. 0.83
   2 ?   -1.7   0.0       1.6   2.2e+03      17      24 ..     138     145 ..     137     147 .. 0.82
   3 !    9.6   0.0   0.00045      0.62       2      30 ..     165     193 ..     164     196 .. 0.91
   4 ?    4.6   0.0     0.017        23       5      30 ..     210     235 ..     206     236 .. 0.88
   5 ?   -0.1   0.1      0.54   7.3e+02       5      28 ..     290     313 ..     287     315 .. 0.72
   6 ?    3.2   0.0     0.046        63       8      25 ..     341     358 ..     341     359 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.7
                HHHHHHTT-HHHHH CS
  PF00515.23  8 GnaylklgkydeAl 21
                G+++ + g++++A+
  MMETSP1325-20131115|8701_1 12 GQMLSHTGRLEDAE 25
                8999999*****97 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 1.6
                 HHHHHHHH CS
  PF00515.23  17 ydeAleyy 24 
                 +d+A+ey 
  MMETSP1325-20131115|8701_1 138 FDKAEEYL 145
                 89999996 PP

  == domain 3    score: 9.6 bits;  conditional E-value: 0.00045
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALel 30 
                  ++  lGn++  + ++ +A + ++ A+e+
  MMETSP1325-20131115|8701_1 165 ASCLSLGNLCVINSDLAQAKQWFKSAIEI 193
                 56789***********************8 PP

  == domain 4    score: 4.6 bits;  conditional E-value: 0.017
                 HHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALel 30 
                  +lG++  klg+   A+++ ++A e+
  MMETSP1325-20131115|8701_1 210 AQLGHVEAKLGRRSRAVAHISRAAEH 235
                 589*******************9875 PP

  == domain 5    score: -0.1 bits;  conditional E-value: 0.54
                 HHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekAL 28 
                    G +    ++++ A  +ye+AL
  MMETSP1325-20131115|8701_1 290 MECGKIWIDEQDPQRACNAYEQAL 313
                 555666667777888888899988 PP

  == domain 6    score: 3.2 bits;  conditional E-value: 0.046
                 HHHHHHTT-HHHHHHHHH CS
  PF00515.23   8 GnaylklgkydeAleyye 25 
                 G+a+ k gk+ +A+  y+
  MMETSP1325-20131115|8701_1 341 GQALEKAGKWRKAETTYS 358
                 89***********99987 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1     0.011        15       9      27 ..      12      30 ..       7      33 .. 0.86
   2 ?   -4.3   0.2        10   1.4e+04      13      22 ..      62      71 ..      61      74 .. 0.76
   3 !    9.7   0.1   0.00053      0.73      17      40 ..     137     160 ..     131     162 .. 0.93
   4 ?    1.5   0.0      0.19   2.7e+02       1      31 [.     163     193 ..     163     199 .. 0.87
   5 ?    3.5   0.2     0.046        62       1      31 [.     205     235 ..     205     236 .. 0.88
   6 ?   -0.5   0.0      0.84   1.1e+03      17      30 ..     301     314 ..     299     326 .. 0.76
   7 ?   -0.9   0.2       1.1   1.6e+03       4      29 ..     312     337 ..     310     339 .. 0.78
   8 !    6.9   0.0    0.0039       5.4       4      40 ..     336     372 ..     333     374 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.011
   PF13374.1  9 AlalrargryeeAlaleee 27
                + +l+ +gr+e+A++++ +
  MMETSP1325-20131115|8701_1 12 GQMLSHTGRLEDAERILLR 30
                7799**********99865 PP

  == domain 2    score: -4.3 bits;  conditional E-value: 10
   PF13374.1 13 rargryeeAl 22
                +++ r e+A 
  MMETSP1325-20131115|8701_1 62 WRQQRGERAK 71
                5788888885 PP

  == domain 3    score: 9.7 bits;  conditional E-value: 0.00053
   PF13374.1  17 ryeeAlaleeealairrrllGddH 40 
                  +++A++++ ++ +i+++ +G++H
  MMETSP1325-20131115|8701_1 137 HFDKAEEYLLRIWEIHEQAFGRNH 160
                 689********************* PP

  == domain 4    score: 1.5 bits;  conditional E-value: 0.19
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealai 31 
                 taa++  L++++    ++++A +++  a +i
  MMETSP1325-20131115|8701_1 163 TAASCLSLGNLCVINSDLAQAKQWFKSAIEI 193
                 89**********9999999999999988877 PP

  == domain 5    score: 3.5 bits;  conditional E-value: 0.046
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealai 31 
                 taa+   L+ + +++gr+ +A+a+  +a+++
  MMETSP1325-20131115|8701_1 205 TAATEAQLGHVEAKLGRRSRAVAHISRAAEH 235
                 7899999**************9998888775 PP

  == domain 6    score: -0.5 bits;  conditional E-value: 0.84
   PF13374.1  17 ryeeAlaleeeala 30 
                 + ++A + +e+al 
  MMETSP1325-20131115|8701_1 301 DPQRACNAYEQALN 314
                 56788888888885 PP

  == domain 7    score: -0.9 bits;  conditional E-value: 1.1
   PF13374.1   4 alnnLAlalrargryeeAlaleeeal 29 
                 aln +A +  +    +eAl+l+  al
  MMETSP1325-20131115|8701_1 312 ALNAIAAMQGQGEASAEALKLLLHAL 337
                 67888888888888889999988887 PP

  == domain 8    score: 6.9 bits;  conditional E-value: 0.0039
   PF13374.1   4 alnnLAlalrargryeeAlaleeealairrrllGddH 40 
                 al   + al + g++++A+  + +  ++  rllG  H
  MMETSP1325-20131115|8701_1 336 ALRAFGQALEKAGKWRKAETTYSQLKTLTSRLLGKGH 372
                 6666789999************************999 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       9.4   1.3e+04      15      25 ..     137     147 ..     128     150 .. 0.74
   2 ?    1.3   0.0      0.38   5.2e+02      14      30 ..     178     194 ..     164     195 .. 0.81
   3 ?   -1.8   0.0       3.7   5.1e+03       6      25 ..     212     231 ..     211     236 .. 0.72
   4 ?    3.9   0.0     0.058        80      12      28 ..     299     314 ..     289     315 .. 0.81
   5 ?   -2.2   0.0       5.1   6.9e+03      13      26 ..     320     333 ..     316     340 .. 0.66
   6 !    7.0   0.1    0.0057       7.8       7      26 ..     341     360 ..     335     363 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 9.4
                 HHHHHHHHHHH CS
   PF13174.1  15 dtdeAlealer 25 
                 ++d+A e+l r
  MMETSP1325-20131115|8701_1 137 HFDKAEEYLLR 147
                 67899999865 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHHHHHH- CS
   PF13174.1  14 gdtdeAlealerlikey 30 
                  d ++A++ ++  i+ +
  MMETSP1325-20131115|8701_1 178 SDLAQAKQWFKSAIEIF 194
                 4889*******999865 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 3.7
                 HHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealer 25 
                 l+ +  klg+ ++A++   r
  MMETSP1325-20131115|8701_1 212 LGHVEAKLGRRSRAVAHISR 231
                 67777888899999987655 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.058
                 HHHHHHHHHHHHHHHHH CS
   PF13174.1  12 klgdtdeAlealerlik 28 
                 ++ d+++A+ a+e+ ++
  MMETSP1325-20131115|8701_1 299 EQ-DPQRACNAYEQALN 314
                 36.***********986 PP

  == domain 5    score: -2.2 bits;  conditional E-value: 5.1
                 HHHHHHHHHHHHHH CS
   PF13174.1  13 lgdtdeAlealerl 26 
                 +g+ +++ eal+ l
  MMETSP1325-20131115|8701_1 320 QGQGEASAEALKLL 333
                 55666666666655 PP

  == domain 6    score: 7.0 bits;  conditional E-value: 0.0057
                 HHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   7 alsyyklgdtdeAlealerl 26 
                 +++++k+g++++A +++ +l
  MMETSP1325-20131115|8701_1 341 GQALEKAGKWRKAETTYSQL 360
                 899***99*********998 PP

>> PF03206.9  Nitrogen fixation protein NifW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.2     0.024        33      45      81 ..      95     132 ..      88     135 .. 0.77
   2 ?    9.1   0.1   0.00086       1.2      35      91 ..     334     392 ..     330     399 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.024
   PF03206.9  45 laaedka.eelseeealakaraaLeraYedFvtssple 81 
                 l++ +++  +l+  e   +ar+aL +a++d v++s+ +
  MMETSP1325-20131115|8701_1  95 LSESKDQeRRLTRLELEYRARQALLKAHADHVKASSEA 132
                 5555554366688888999*************998765 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00086
   PF03206.9  35 LHILkrfsqylaaedka..eelseeealakaraaLeraYedFvtsspleekvFkvfkda 91 
                 LH L+ f+q l+++ k   +e++ ++  +  +++L + ++++ +++++++k+    k++
  MMETSP1325-20131115|8701_1 334 LHALRAFGQALEKAGKWrkAETTYSQLKTLTSRLLGKGHKATKAAAARAKKAESMAKTH 392
                 9*************7664455577788888999***********999999876666655 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.082   1.1e+02       4      26 ..       8      30 ..       5      41 .. 0.77
   2 ?    0.7   0.1      0.75     1e+03      12      37 ..      62      87 ..      53      95 .. 0.79
   3 ?   -1.7   0.0       4.4     6e+03      19      31 ..     113     125 ..     104     134 .. 0.75
   4 ?    1.9   0.0      0.31   4.3e+02      16      31 ..     137     152 ..     128     157 .. 0.84
   5 ?    1.8   0.0      0.33   4.5e+02       6      30 ..     169     193 ..     164     196 .. 0.84
   6 ?    7.2   0.2    0.0059       8.1       2      34 ..     207     239 ..     206     243 .. 0.86
   7 ?    5.0   0.3      0.03        41       3      41 ..     288     333 ..     286     336 .. 0.71
   8 ?    3.3   1.0      0.11   1.5e+02       3      27 ..     336     360 ..     327     397 .. 0.87

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.082
   PF13428.1  4 llalarallalGdpdeAiallrr 26
                ll+ ++ l + G++++A++ l r
  MMETSP1325-20131115|8701_1  8 LLLEGQMLSHTGRLEDAERILLR 30
                4455888999*********9876 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.75
   PF13428.1 12 lalGdpdeAiallrralalaPddaea 37
                +++++ ++A + ++++la + ++a  
  MMETSP1325-20131115|8701_1 62 WRQQRGERAKESAEDWLASDEGHALW 87
                67888899999999999998887655 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 4.4
   PF13428.1  19 eAiallrralala 31 
                 +A+++l +a a++
  MMETSP1325-20131115|8701_1 113 RARQALLKAHADH 125
                 6888888887765 PP

  == domain 4    score: 1.9 bits;  conditional E-value: 0.31
   PF13428.1  16 dpdeAiallrralala 31 
                 ++d+A+++l r+ + +
  MMETSP1325-20131115|8701_1 137 HFDKAEEYLLRIWEIH 152
                 79********998766 PP

  == domain 5    score: 1.8 bits;  conditional E-value: 0.33
   PF13428.1   6 alarallalGdpdeAiallrralal 30 
                  l++++  + d+++A ++++ a++ 
  MMETSP1325-20131115|8701_1 169 SLGNLCVINSDLAQAKQWFKSAIEI 193
                 57788888889**********9985 PP

  == domain 6    score: 7.2 bits;  conditional E-value: 0.0059
   PF13428.1   2 eallalarallalGdpdeAiallrralalaPdd 34 
                 ++ ++l+++ + lG+  +A+a+  ra++++ + 
  MMETSP1325-20131115|8701_1 207 ATEAQLGHVEAKLGRRSRAVAHISRAAEHYMET 239
                 56689*********************9988665 PP

  == domain 7    score: 5.0 bits;  conditional E-value: 0.03
   PF13428.1   3 allalarallalGdpdeAiallrrala.......laPddaealllL 41 
                 ++++ + + ++ +dp++A +++++al        ++  +aeal+lL
  MMETSP1325-20131115|8701_1 288 LWMECGKIWIDEQDPQRACNAYEQALNaiaamqgQGEASAEALKLL 333
                 6777888899999999999999999864444544555666666655 PP

  == domain 8    score: 3.3 bits;  conditional E-value: 0.11
   PF13428.1   3 allalarallalGdpdeAiallrra 27 
                 al+a ++al+ +G + +A+  + ++
  MMETSP1325-20131115|8701_1 336 ALRAFGQALEKAGKWRKAETTYSQL 360
                 6677789999999999999988765 PP

>> PF03050.9  Transposase IS66 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.9   2.9e-05      0.04     172     232 ..      36     107 ..      14     150 .. 0.82
   2 ?    0.3   0.0      0.22     3e+02     174     216 ..     208     250 ..     178     253 .. 0.69
   3 ?    3.6   2.0     0.021        29     137     195 ..     327     388 ..     272     402 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.9e-05
   PF03050.9 172 yaiereara...........aeerralrqekskpllaeleawleeqsrkvlpksklakairyllnrweallr 232
                  a  ++++a            ++ +++rq++ ++++++ e+wl + + ++l +s++++++ ++++++++l+r
  MMETSP1325-20131115|8701_1  36 AARAESISAcscyttiaemyVQKYLRWRQQRGERAKESAEDWLASDEGHALWRSEVKRLLSESKDQERRLTR 107
                 443333331223333333335899**********************************************98 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.22
   PF03050.9 174 ierearaaeerralrqekskpllaeleawleeqsrkvlpkskl 216
                  e+++ + e+++ +r +  + + ++ e+++e+ +++v+p+s++
  MMETSP1325-20131115|8701_1 208 TEAQLGHVEAKLGRRSRAVAHISRAAEHYMETAKATVSPSSTA 250
                 3333324789999999999999999999999999999999875 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.021
   PF03050.9 137 vtealCwaHarRkfvdakkakqqaaaealerigelyaierear.a...aeerralrqekskpl 195
                 ++ +  + Ha+R f +a +++ +++ +a ++ ++l ++++++  +   a +++a+r++k++ +
  MMETSP1325-20131115|8701_1 327 AEALKLLLHALRAFGQALEKA-GKWRKAETTYSQLKTLTSRLLgKghkATKAAAARAKKAESM 388
                 55567789*********9985.77777777777777777777542333455555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       666  (0.0487127); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.85u 0.43s 00:00:01.28 Elapsed: 00:00:00.59
# Mc/sec: 1787.11
//
Query:       MMETSP1325-20131115|8710_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.013   14.9   0.0    1.0  1  PF00186.14 Dihydrofolate reductase


Domain annotation for each model (and alignments):
>> PF00186.14  Dihydrofolate reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   9.6e-07     0.013      57      91 ..       3      44 ..       1      50 [. 0.76

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 9.6e-07
                TCEEEEE-S-TT--......---EEESSHHHHCCCCCHS..T CS
  PF00186.14 57 nrkniVltrnkdlka.....egvevvssleealalakee..e 91
                nr n+V++rn+++++     ++v+v+ssl eal+l +++  +
  MMETSP1325-20131115|8710_1  3 NRVNVVISRNPSIREelaipDNVHVASSLPEALELLEHDgiQ 44
                8***********555455645888*********966655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 235.11
//
Query:       MMETSP1325-20131115|8712_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0051   16.7   0.0      0.029   14.3   0.0    1.9  2  PF08883.6 Dopa 4,5-dioxygenase family


Domain annotation for each model (and alignments):
>> PF08883.6  Dopa 4,5-dioxygenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   2.1e-06     0.029      67      97 ..      17      47 ..       2      52 .. 0.78
   2 ?   -0.1   0.0     0.063   8.6e+02       1      16 [.      97     112 ..      97     123 .. 0.66

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.1e-06
                H-----EEEEEE---HHHHHHHS-EEE---- CS
   PF08883.6 67 nrgkLsvliHpetgddlkdHteralWlGekl 97
                +  +++ l+Hp tg +++dH e a+ +Ge +
  MMETSP1325-20131115|8712_1 17 QDMSFDFLVHPATGCNFADHYEFAMSIGEFI 47
                4456789******************999865 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.063
                 EEEEEEE-GGGHHHHH CS
   PF08883.6   1 yhaHvYfdeaeleeak 16 
                 ++ Hv +d+++  +a+
  MMETSP1325-20131115|8712_1  97 FNLHVLYDPSNDLAAQ 112
                 7899999876655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 616.21
//
Query:       MMETSP1325-20131115|8713_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 355.59
//
Query:       MMETSP1325-20131115|8714_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 1080.62
//
Query:       MMETSP1325-20131115|8716_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   13.8   0.0      0.026   13.7   0.0    1.1  1  PF01273.20 LBP / BPI / CETP family, N-terminal domain


Domain annotation for each model (and alignments):
>> PF01273.20  LBP / BPI / CETP family, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.9e-06     0.026      98     150 ..      30      82 ..       3      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.9e-06
                 EEEEEEE---EEEEEEEEEEEEEEEEEEE---.---HHHHHHHHTHHHHHHHH- CS
  PF01273.20  98 lalerdeqGrptvvlseCsssigsisisllgg.lgslldlftnllektlkkvlk 150
                 l+++  + G+p +++ + s+s+gs+++ ++++ + ++++  + +l   l+ ++ 
  MMETSP1325-20131115|8716_1  30 LSIGVYN-GQPSLSVMSTSVSVGSAELMISDTrAAWVYNTAAYILRPRLRTMIG 82 
                 5555555.9***************************************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|8718_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.60
# Mc/sec: 367.44
//
Query:       MMETSP1325-20131115|8715_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2392  (0.174956); expected 273.4 (0.02)
Passed bias filter:                      590  (0.0431539); expected 273.4 (0.02)
Passed Vit filter:                       241  (0.0176273); expected 13.7 (0.001)
Passed Fwd filter:                       100  (0.00731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 2.88u 0.52s 00:00:03.40 Elapsed: 00:00:01.35
# Mc/sec: 715.36
//
Query:       MMETSP1325-20131115|8720_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.45s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 357.28
//
Query:       MMETSP1325-20131115|8722_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.25s 00:00:00.55 Elapsed: 00:00:00.49
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|8724_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|8726_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0045   16.6   1.1     0.0052   16.4   0.7    1.1  1  PF08074.6 CHDCT2 (NUC038) domain
  ------ inclusion threshold ------
       0.64    9.9   4.0       0.56   10.1   0.8    1.8  2  PF08895.6 Domain of unknown function (DUF1840)


Domain annotation for each model (and alignments):
>> PF08074.6  CHDCT2 (NUC038) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.7   7.7e-07    0.0052      68     153 ..      44     129 ..      23     137 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 7.7e-07
   PF08074.6  68 qalvieeqlrraaklnlkqdpdhpamalaarfaeleclaeshqhlskeslagnknanavlhkvlaqleellsdlkadvarlpatls 153
                 +++viee + +a   n   +  + a   +  +a l  +a+s+     ++  ++++ ++  +k+l++ ++ l++l + +a+l  +l 
  MMETSP1325-20131115|8726_1  44 RSIVIEEEVEKAMAQNFGEQVMDNAKRKELDMAPLVSVADSQLTTDIDAAGKKRPKKSTGTKTLKEAKHTLAKLAKRAAKLEEALE 129
                 699**************9999999********************99999999999999****************999999987765 PP

>> PF08895.6  Domain of unknown function (DUF1840)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1     0.088     6e+02      34      58 ..      44      69 ..      38      78 .. 0.63
   2 ?   10.1   0.8   8.2e-05      0.56      44     101 ..      81     136 ..      75     138 .] 0.81

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.088
   PF08895.6 34 rGvitaeelpaAia.kLeaaiaeeaa 58
                r+++ +ee+++A+a +  +++ ++a+
  MMETSP1325-20131115|8726_1 44 RSIVIEEEVEKAMAqNFGEQVMDNAK 69
                66777888888875145555544433 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 8.2e-05
   PF08895.6  44 aAiakLeaaiaeeaaekeeeaeeeedeeeeeeeeeavsLaqRalPllelLkaaakeea 101
                  A ++L+++i  +aa k+++++++ ++  +e+++   +La+Ra+ l e L++a ++++
  MMETSP1325-20131115|8726_1  81 VADSQLTTDI--DAAGKKRPKKSTGTKTLKEAKHTLAKLAKRAAKLEEALERAIASRC 136
                 6778999999..5666666666666778888899999****************99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       870  (0.0636337); expected 273.4 (0.02)
Passed bias filter:                      570  (0.041691); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 703.61
//
Query:       MMETSP1325-20131115|8729_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1450  (0.106056); expected 273.4 (0.02)
Passed bias filter:                      435  (0.0318169); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                        33  (0.00241369); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 0.42s 00:00:01.10 Elapsed: 00:00:00.69
# Mc/sec: 333.41
//
Query:       MMETSP1325-20131115|8727_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-29   99.9   0.1    6.3e-29   99.7   0.1    1.1  1  PF03645.8  Tctex-1 family
     0.0011   18.6   0.3     0.0015   18.1   0.2    1.2  1  PF06103.6  Bacterial protein of unknown function (DUF948)
     0.0052   15.8   0.3     0.0065   15.5   0.2    1.1  1  PF03367.8  ZPR1 zinc-finger domain
  ------ inclusion threshold ------
       0.04   13.9   0.3      0.049   13.6   0.2    1.2  1  PF00804.20 Syntaxin
      0.097   12.2   0.5       0.12   11.9   0.3    1.1  1  PF00554.17 Rel homology domain (RHD)
       0.12   11.3   0.6       0.44    9.4   0.0    1.8  2  PF01129.13 NAD:arginine ADP-ribosyltransferase
       0.13   11.8   0.1       0.23   11.0   0.0    1.4  1  PF14435.1  SUKH-4 immunity protein
       0.24   10.7   1.3         11    5.4   0.1    2.2  2  PF12513.3  Mitochondrial degradasome RNA helicase subunit C terminal


Domain annotation for each model (and alignments):
>> PF03645.8  Tctex-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   0.1   3.7e-32   6.3e-29       2     102 .]      24     123 ..      23     123 .. 0.97

  Alignments for each domain:
  == domain 1    score: 99.7 bits;  conditional E-value: 3.7e-32
                 HHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHCC..T-SCCEEEEEEEEE------EEEEEE-S-TTT---EEEEEESSSEEEEEEEE-EE- CS
   PF03645.8   2 kevkeiikevleeaLksvkYehekveqwskeiietilkklkelstkkryKyvvnctIvqkggrgmhvasgalWdektDgmvsvkyenkgldvvvtvfaval 102
                 +e+k ii++vl+e+L++++Y+ e+v++ +k+i+++i++kl e+   +ryK++v+++I++++g+g+++ ++ +Wd +tD+++s +y n++l++v+t ++v+l
  MMETSP1325-20131115|8727_1  24 NEMKGIINKVLKEELEGKQYQTEQVQEQTKKIADDIRNKLREMDK-PRYKFFVQVVIGEQRGEGVRMGCRTFWDADTDSYASEQYVNDSLFCVATAYGVYL 123
                 6899***************************************65.****************************************************996 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.2   8.9e-07    0.0015      29      72 ..      24      68 ..      11      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 8.9e-07
   PF06103.6 29 devnktv.kkltkqvdgitketeellaktnelleDvneKvetldp 72
                +e++  + k+l+++++g  ++te++ ++t+++++D+ +K  ++d+
  MMETSP1325-20131115|8727_1 24 NEMKGIInKVLKEELEGKQYQTEQVQEQTKKIADDIRNKLREMDK 68
                5566655146899***************************99885 PP

>> PF03367.8  ZPR1 zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   3.8e-06    0.0065      86     148 ..      12      75 ..       4      85 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 3.8e-06
                 EE-.-------EEE----HHHH.HHHHHSS--------GGG-HHHHHHHHH----------EEE CS
   PF03367.8  86 eiePgkalegelttvEGllerv.eeelskaqekrdsedeekkkkieefleklkelkegkekltl 148
                 +i+P+ +++  +  + G++++v +eel+ +q ++++ +e++kk ++++ +kl+e+ + + k+ +
  MMETSP1325-20131115|8727_1  12 QIRPEYRQRISVNEMKGIINKVlKEELEGKQYQTEQVQEQTKKIADDIRNKLREMDKPRYKFFV 75 
                 68999999***********9975789******999*******************9887777654 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   2.9e-05     0.049      41      70 ..      39      68 ..       6      87 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.9e-05
  PF00804.20 41 kqtkeeleeltaeikklankirskLksleq 70
                + ++ + e+ ++++kk+a +ir+kL+++++
  MMETSP1325-20131115|8727_1 39 EGKQYQTEQVQEQTKKIADDIRNKLREMDK 68
                4678899********************997 PP

>> PF00554.17  Rel homology domain (RHD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   7.2e-05      0.12      81     155 ..      10      87 ..       3      92 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 7.2e-05
                 EEEEXTT.XSEEEXSXX.XXE.EXXCCCHHHHHHHHHCTTXHCCHHHHHHCHHHCCXXTTEEEEEEEEEEEEXXXXEE CS
  PF00554.17  81 evelkpe.dmvasfqnl.GIl.cvkkkeveealkerielkekeknvekeakeeakeidlnvvrlcFqaflpdstgnft 155
                 + +++pe + ++s++++ GI+ +v k+e+e +  + ++++e+ k++ ++ +++ +e+d  + +   q+++ +++g++ 
  MMETSP1325-20131115|8727_1  10 TYQIRPEyRQRISVNEMkGIInKVLKEELEGKQYQTEQVQEQTKKIADDIRNKLREMDKPRYKFFVQVVIGEQRGEGV 87 
                 6788999988899988768653899999999999999*********************************99999875 PP

>> PF01129.13  NAD:arginine ADP-ribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2      0.16   2.7e+02      16      49 ..      23      56 ..      16      75 .. 0.69
   2 ?    9.4   0.0   0.00026      0.44     139     177 ..      82     122 ..      71     124 .] 0.89

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.16
  PF01129.13 16 leemeaklpsllkeefaanqalaesweqakkkwk 49
                ++em+  +++ lkee + +q   e++++ +kk +
  MMETSP1325-20131115|8727_1 23 VNEMKGIINKVLKEELEGKQYQTEQVQEQTKKIA 56
                5677777888888888777766666666666655 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00026
  PF01129.13 139 kkgksvRfg..qFtssslkkkvaeefgedtlfsiktclgvp 177
                 ++g+ vR+g   F  + ++  ++e++ +d lf + t++gv+
  MMETSP1325-20131115|8727_1  82 QRGEGVRMGcrTFWDADTDSYASEQYVNDSLFCVATAYGVY 122
                 67888999855799*************************97 PP

>> PF14435.1  SUKH-4 immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00013      0.23     131     166 ..      35      71 ..      27      82 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00013
   PF14435.1 131 leeldeledee.qdqeeaealaeelreelreiDpkaf 166
                 +eel+ ++ ++ q qe+ +++a+++r++lre+D + +
  MMETSP1325-20131115|8727_1  35 KEELEGKQYQTeQVQEQTKKIADDIRNKLREMDKPRY 71 
                 45555555555889*******************9866 PP

>> PF12513.3  Mitochondrial degradasome RNA helicase subunit C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1    0.0063        11      28      48 ..      20      40 ..      17      41 .. 0.86
   2 ?    4.4   0.1     0.013        22      29      49 .]      46      66 ..      43      66 .. 0.89

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0063
   PF12513.3 28 relaeelkkkveekIeeiLer 48
                r +++e+k  +++ + e+Le+
  MMETSP1325-20131115|8727_1 20 RISVNEMKGIINKVLKEELEG 40
                5589**************985 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.013
   PF12513.3 29 elaeelkkkveekIeeiLerl 49
                e ++e  kk+++ I ++L+++
  MMETSP1325-20131115|8727_1 46 EQVQEQTKKIADDIRNKLREM 66
                8899**************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1518  (0.11103); expected 273.4 (0.02)
Passed bias filter:                     1104  (0.080749); expected 273.4 (0.02)
Passed Vit filter:                       125  (0.00914277); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.44s 00:00:00.97 Elapsed: 00:00:00.57
# Mc/sec: 512.32
//
Query:       MMETSP1325-20131115|8730_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.96
# Mc/sec: 327.00
//
Query:       MMETSP1325-20131115|8732_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-18   64.3   0.0    7.4e-18   64.2   0.0    1.0  1  PF13898.1 Domain of unknown function (DUF4205)


Domain annotation for each model (and alignments):
>> PF13898.1  Domain of unknown function (DUF4205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.0   5.4e-22   7.4e-18     240     307 ..       2      72 ..       1      86 [. 0.83

  Alignments for each domain:
  == domain 1    score: 64.2 bits;  conditional E-value: 5.4e-22
   PF13898.1 240 lqvGskLKtPklpiWvvcseshysvlFalnkell...sdwklekrfeLyyydglanqeeeirltvdtrsaa 307
                  +vG++ K P++p+Wv+ seshysv+F+ + +     +d k+++ f+Lyy+d lanq+e i+ltv    ++
  MMETSP1325-20131115|8732_1   2 FEVGTHYKVPEIPVWVIYSESHYSVMFSEDVDAFhatRDGKVDRPFDLYYWDMLANQDEVIKLTVTPNTNN 72 
                 58***************************9987622267788***********************876544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.95
# Mc/sec: 219.46
//
Query:       MMETSP1325-20131115|8731_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   13.8   0.4      0.098   13.2   0.1    1.5  1  PF09626.5 Dihaem cytochrome c


Domain annotation for each model (and alignments):
>> PF09626.5  Dihaem cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   7.2e-06     0.098      31      85 ..      10      63 ..       5      93 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 7.2e-06
   PF09626.5 31 kHfgedasldeetraeieeyLeanaaekskkklaakilrsl.eeeaplritespyf 85
                +H  +++ ++++  ++i++yL+ n+++ +++   ++ lr + ++++p++it+ +  
  MMETSP1325-20131115|8731_1 10 SHAAKNILMSAPPVKTIRQYLRLNSKKMDNA--RENSLRDVvDQHIPKHITDAEAN 63
                6888999999*****************9996..455555555*********98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 695.87
//
Query:       MMETSP1325-20131115|8733_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 571.76
//
Query:       MMETSP1325-20131115|8735_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|8736_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-11   42.5   0.0    8.7e-11   42.0   0.0    1.2  1  PF01728.14 FtsJ-like methyltransferase
  ------ inclusion threshold ------
      0.044   11.5   0.0      0.053   11.2   0.0    1.1  1  PF14314.1  Virus-capping methyltransferase


Domain annotation for each model (and alignments):
>> PF01728.14  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   0.0   1.3e-14   8.7e-11     118     181 .]       7      72 ..       3      72 .. 0.92

  Alignments for each domain:
  == domain 1    score: 42.0 bits;  conditional E-value: 1.3e-14
  PF01728.14 118 ilaalklalellkpggnfvlklfkgeea.e.ellkqlrkfFekvsvvkpkasrkesseeflvclgf 181
                 i a++  a++llk+gg++++klf++ e+ + +ll  l   F+++ +vkp +sr++sse++++c+gf
  MMETSP1325-20131115|8736_1   7 ITAETLAAVQLLKRGGSLLMKLFDTLETyTvSLLALLHLSFNRMAIVKPITSRPASSERYVICEGF 72 
                 567788999***************7777678********************************997 PP

>> PF14314.1  Virus-capping methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   7.8e-06     0.053     442     508 ..      14      79 ..       6      94 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 7.8e-06
   PF14314.1 442 vlslLeeegvlifKTYgtilveeeknvldllgrlFksvqlvqTelsSsktSEvYvvfkklkkfvdae 508
                 +++lL++ g+l++K +  +l + + ++l ll   F++  +v+   s   +SE Yv+++  k + d++
  MMETSP1325-20131115|8736_1  14 AVQLLKRGGSLLMKLFD-TLETYTVSLLALLHLSFNRMAIVKPITSRPASSERYVICEGFKLVEDTP 79 
                 5799**********985.57888889*****************9999**********9988766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 568.55
//
Query:       MMETSP1325-20131115|8739_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.8e-05   21.8   0.0    0.00011   21.5   0.0    1.1  1  PF02574.11 Homocysteine S-methyltransferase


Domain annotation for each model (and alignments):
>> PF02574.11  Homocysteine S-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   7.7e-09   0.00011     103     138 ..       3      41 ..       1      43 [. 0.85

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 7.7e-09
                 .-EEE---B..........--HHHHTT-HH..HHHHHHH CS
  PF02574.11 103 krlvaGsiGpygatla.gseypgeygvsle..elkkayr 138
                 + lva+s+Gpyga+la gsey+g+yg +++   l++++ 
  MMETSP1325-20131115|8739_1   3 RPLVAASVGPYGAALAnGSEYTGDYGRDVTasLLSEWHX 41 
                 579***********************9998655677775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 393.69
//
Query:       MMETSP1325-20131115|8734_1  [L=400]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-08   33.2   0.9      3e-08   33.2   0.6    2.4  2  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    8.3e-07   28.5   6.7    8.3e-07   28.5   4.6    3.5  2  PF13639.1  Ring finger domain
    1.7e-05   24.2   2.2    1.7e-05   24.2   1.5    3.0  2  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    0.00035   20.0   0.2    0.00035   20.0   0.1    3.0  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    0.00045   20.1   0.2    0.00045   20.1   0.1    2.0  2  PF12678.2  RING-H2 zinc finger
  ------ inclusion threshold ------
      0.039   13.4   0.7       0.24   10.9   0.4    2.3  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
       0.16   11.7   1.9       0.55    9.9   1.3    2.0  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
       0.46    9.8   4.4        2.7    7.4   0.0    2.9  3  PF04423.9  Rad50 zinc hook motif
        1.6    7.7   8.0        4.4    6.3   0.8    3.5  3  PF10122.4  Mu-like prophage protein Com


Domain annotation for each model (and alignments):
>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   2.2       1.1   1.7e+03      13      44 ..      93     127 ..      86     129 .. 0.58
   2 !   33.2   0.6     2e-11     3e-08       4      45 ..     293     359 ..     291     360 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 1.1
   PF13923.1  13 enpviltpC.gHlyCkkCieqwleks....kkkCPiC 44 
                 +++  +++C g +  ++C +  +++     ++ CP C
  MMETSP1325-20131115|8734_1  93 RQC--AMCCfGPVDYYRCSDLAAHHReggsSNACPRC 127
                 455..35663445567776654444355555569988 PP

  == domain 2    score: 33.2 bits;  conditional E-value: 2e-11
   PF13923.1   4 sCpiCleelen......................pviltpCgHlyCkkCieqwleks...kkkCPiCr 45 
                 +Cp+Cl+e+ +                      p ++++CgH ++  C+e  ++ +   + +CP+Cr
  MMETSP1325-20131115|8734_1 293 VCPVCLDEFGSdaeaaahlkgtdaaaalrlvnpPCVALRCGHALHLACAEAAVQAAgghHVRCPLCR 359
                 8********888*********************8899************998888788899*****9 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.7   5.4         9   1.4e+04      27      43 ..     106     127 ..      87     129 .. 0.53
   2 !   28.5   4.6   5.5e-10   8.3e-07       2      46 .]     293     361 ..     292     361 .. 0.79

  Alignments for each domain:
  == domain 1    score: -5.7 bits;  conditional E-value: 9
   PF13639.1  27 eeCldewlrs.....snsCPlC 43 
                 ++C d   ++     sn CP C
  MMETSP1325-20131115|8734_1 106 YRCSDLAAHHreggsSNACPRC 127
                 4454444433112224689888 PP

  == domain 2    score: 28.5 bits;  conditional E-value: 5.5e-10
   PF13639.1   2 eCaiCldelse....................geevvrlpCgHvfHeeCldewl....rssnsCPlCrkp 46 
                 +C++Clde+ +                    + ++v l+CgH  H  C ++ +     ++ +CPlCr+p
  MMETSP1325-20131115|8734_1 293 VCPVCLDEFGSdaeaaahlkgtdaaaalrlvNPPCVALRCGHALHLACAEAAVqaagGHHVRCPLCREP 361
                 7********55666667777777778888888888899*************9933333467******86 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.9   4.7         9   1.4e+04      26      43 ..     108     127 ..      91     129 .. 0.48
   2 !   24.2   1.5   1.1e-08   1.7e-05       4      47 ..     293     362 ..     290     365 .. 0.82

  Alignments for each domain:
  == domain 1    score: -4.9 bits;  conditional E-value: 9
   PF13920.1  26 CeeCaerllk..rkkkCpiC 43 
                 C++ a + ++  +++ Cp C
  MMETSP1325-20131115|8734_1 108 CSDLAAHHREggSSNACPRC 127
                 33333333225666888888 PP

  == domain 2    score: 24.2 bits;  conditional E-value: 1.1e-08
   PF13920.1   4 tCvvCleread.......................vlllpCgHlclCeeCaerllk....rkkkCpiCrspi 47 
                  C+vCl+++ +                       ++ l+CgH+ l  +Cae+ ++     + +Cp+Cr+p 
  MMETSP1325-20131115|8734_1 293 VCPVCLDEFGSdaeaaahlkgtdaaaalrlvnppCVALRCGHA-LHLACAEAAVQaaggHHVRCPLCREPA 362
                 6999999744444556677777777888888888999******.*********99*************996 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.3   4.3         9   1.4e+04      28      41 .]     114     127 ..      93     127 .. 0.64
   2 !   20.0   0.1   2.3e-07   0.00035       1      41 []     294     358 ..     294     358 .. 0.94

  Alignments for each domain:
  == domain 1    score: -5.3 bits;  conditional E-value: 9
                 HHHCST-----TTT CS
  PF00097.20  28 kilksrkkvkCPlC 41 
                 ++++  +++ CP C
  MMETSP1325-20131115|8734_1 114 HHREGGSSNACPRC 127
                 34443556669988 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 2.3e-07
                 -TTTSSS-SSEE.......................BSCTS-EE-CHHHHHHHCS..T-----TTT CS
  PF00097.20   1 CpiCleeakepn......................elleCkHsfCskCirkilks..rkkvkCPlC 41 
                 Cp+Cl+e+                           +l C+H+++ +C +  ++     +v CPlC
  MMETSP1325-20131115|8734_1 294 CPVCLDEFGSDAeaaahlkgtdaaaalrlvnppcVALRCGHALHLACAEAAVQAagGHHVRCPLC 358
                 99999999888889999999999999999999999*******************9999999**** PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.3         9   1.4e+04      69      74 ..      93      98 ..      85     100 .. 0.64
   2 !   20.1   0.1   2.9e-07   0.00045      19      75 .]     291     359 ..     266     359 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 9
   PF12678.2 69 ktCPlc 74
                ++C +c
  MMETSP1325-20131115|8734_1 93 RQCAMC 98
                355555 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 2.9e-07
   PF12678.2  19 ednCaiCrnel.eelcpeckapg.......ksde..cpvawgeCgHaFHlhCiskWlktrk....tCPlcr 75 
                  ++C +C  e+ +++    + +g              p +  +CgHa Hl C +  ++ +      CPlcr
  MMETSP1325-20131115|8734_1 291 GEVCPVCLDEFgSDAEAAAHLKGtdaaaalR--LvnPPCVALRCGHALHLACAEAAVQAAGghhvRCPLCR 359
                 578********88888888888865554441..0322335668**************98878889*****8 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.4   0.00016      0.24      12      57 ..     293     356 ..     292     357 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00016
                 B-TTT-S.-SS......................EE.EES---EEEHHHHHHHHHHHHTTT--B--- CS
   PF13445.1  12 aCpiske.qsteqnp..................Pv.vLpCGhvisrealeklakggrsnkgrfkCP 57 
                 +Cp++ + ++++ +                   P   L+CGh +   + e  ++     + +++CP
  MMETSP1325-20131115|8734_1 293 VCPVCLDeFGSDAEAaahlkgtdaaaalrlvnpPCvALRCGHALHLACAEAAVQAA--GGHHVRCP 356
                 577777777665555677777777777777776662699**************932..3459***9 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.3   0.00036      0.55      45      80 ..     325     361 ..     288     366 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00036
   PF12861.2  45 cplvlGkckhnfhlhcilkwletets.kglcpmcrqt 80 
                  p v  +c h++hl c    +++    + +cp+cr+ 
  MMETSP1325-20131115|8734_1 325 PPCVALRCGHALHLACAEAAVQAAGGhHVRCPLCREP 361
                 5778889************99988651678*****86 PP

>> PF04423.9  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       3.7   5.6e+03      19      27 ..     121     128 ..     120     128 .. 0.77
   2 ?    7.4   0.0    0.0018       2.7      20      35 ..     291     306 ..     288     309 .. 0.84
   3 ?    3.4   0.1     0.031        47      20      27 ..     351     359 ..     342     361 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 3.7
                 -----S--- CS
   PF04423.9  19 akgcCPvCg 27 
                 ++  CP Cg
  MMETSP1325-20131115|8734_1 121 SN-ACPRCG 128
                 45.8**998 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0018
                 ----S-------HHHH CS
   PF04423.9  20 kgcCPvCgreLdeehe 35 
                 +++CPvC  e++++ e
  MMETSP1325-20131115|8734_1 291 GEVCPVCLDEFGSDAE 306
                 569********99987 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.031
                 --.--S--- CS
   PF04423.9  20 kg.cCPvCg 27 
                 ++ +CP+C 
  MMETSP1325-20131115|8734_1 351 HHvRCPLCR 359
                 5679****7 PP

>> PF10122.4  Mu-like prophage protein Com
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1     0.075   1.1e+02      27      31 ..     124     128 ..     121     137 .. 0.88
   2 ?    6.3   0.8    0.0029       4.4       5      31 ..     330     359 ..     328     369 .. 0.79
   3 ?    1.4   0.0     0.094   1.4e+02      27      39 ..     381     393 ..     373     395 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.075
   PF10122.4  27 CpRCg 31 
                 CpRCg
  MMETSP1325-20131115|8734_1 124 CPRCG 128
                 ****9 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0029
   PF10122.4   5 iRCghCnkLLAragavse...LeikCpRCg 31 
                 +RCgh   L +   av+     +++Cp C+
  MMETSP1325-20131115|8734_1 330 LRCGHALHLACAEAAVQAaggHHVRCPLCR 359
                 8*******998765555422269******8 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.094
   PF10122.4  27 CpRCgtlNhvkae 39 
                 C R +tl h +a+
  MMETSP1325-20131115|8734_1 381 CRRTRTLAHARAA 393
                 9999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.62
# Mc/sec: 1546.04
//
Query:       MMETSP1325-20131115|8740_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   21.1   0.1    0.00016   20.5   0.0    1.3  1  PF00036.27 EF hand
    0.00022   20.2   0.6    0.00039   19.5   0.4    1.3  1  PF13202.1  EF hand
    0.00084   19.3   0.0     0.0012   18.8   0.0    1.3  1  PF13499.1  EF-hand domain pair
     0.0027   17.1   0.0     0.0038   16.7   0.0    1.3  1  PF13833.1  EF-hand domain pair
     0.0074   15.9   0.3      0.015   15.0   0.2    1.6  1  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.049   13.6   2.2        0.2   11.7   0.1    2.5  2  PF01169.14 Uncharacterized protein family UPF0016


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   7.2e-08   0.00016       3      25 ..      29      51 ..      27      55 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 7.2e-08
                HHHHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkea 25
                ++ F+ +D+Dg+G +s +Ef ++
  MMETSP1325-20131115|8740_1 29 QNGFDNADTDGNGVLSRDEFAAF 51
                5669****************875 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.4   1.7e-07   0.00039       5      24 ..      32      51 ..      29      52 .. 0.93

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 1.7e-07
                HHHH--S----B-HHHHHHH CS
   PF13202.1  5 FrafDlNgDGkIsreELkrl 24
                F+ +D++g G +sr+E+ ++
  MMETSP1325-20131115|8740_1 32 FDNADTDGNGVLSRDEFAAF 51
                999**************886 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   5.2e-07    0.0012      46      65 ..      32      51 ..      23      70 .. 0.89

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 5.2e-07
   PF13499.1 46 fkelDkngdGvlsfeEflqa 65
                f+++D++g+Gvls++Ef+++
  MMETSP1325-20131115|8740_1 32 FDNADTDGNGVLSRDEFAAF 51
                88999999999999999865 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   1.6e-06    0.0038      31      51 ..      32      52 ..      12      55 .. 0.79

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 1.6e-06
   PF13833.1 31 frefDtdgdGkisfeEFcvll 51
                f+ +Dtdg+G +s +EF ++ 
  MMETSP1325-20131115|8740_1 32 FDNADTDGNGVLSRDEFAAFG 52
                8889*************9875 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.2   6.4e-06     0.015       4      24 ..      30      50 ..      27      64 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 6.4e-06
                ---GCC-------B---HHHH CS
   PF13405.1  4 eaFklfDkdgdGkidaeELrd 24
                  F+  D+dg+G ++++E+ +
  MMETSP1325-20131115|8740_1 30 NGFDNADTDGNGVLSRDEFAA 50
                569999*************87 PP

>> PF01169.14  Uncharacterized protein family UPF0016
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.2      0.21   4.7e+02      32      58 ..      14      28 ..       6      33 .. 0.48
   2 ?   11.7   0.1   8.7e-05       0.2       1      17 [.     109     125 .]     109     125 .] 0.95

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.21
  PF01169.14 32 plaVflGatlAlllvtllavllGklla 58
                  +V+             +v+lG++la
  MMETSP1325-20131115|8740_1 14 LALVVG------------GVVLGSALA 28
                333333............444444443 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 8.7e-05
  PF01169.14   1 fltsflliflaElGDKT 17 
                 f++s+l+i++ ElGDKT
  MMETSP1325-20131115|8740_1 109 FFNSLLMIIVTELGDKT 125
                 7899************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 611.32
//
Query:       MMETSP1325-20131115|8742_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 508.03
//
Query:       MMETSP1325-20131115|8743_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.06   12.8   0.0       0.13   11.8   0.0    1.5  1  PF06594.6 Haemolysin-type calcium binding protein related domain


Domain annotation for each model (and alignments):
>> PF06594.6  Haemolysin-type calcium binding protein related domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   9.5e-06      0.13      21      40 ..      23      41 ..      18      43 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.5e-06
   PF06594.6 21 ddygygiEqieFADGtvWtr 40
                + + +g+E ++ +DGt++t 
  MMETSP1325-20131115|8743_1 23 N-GRGGVEYVKLSDGTILTK 41
                3.589************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 531.99
//
Query:       MMETSP1325-20131115|8744_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   11.5   0.1       0.17   11.1   0.1    1.2  1  PF11178.3 Protein of unknown function (DUF2963)


Domain annotation for each model (and alignments):
>> PF11178.3  Protein of unknown function (DUF2963)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   1.3e-05      0.17      10      30 ..       9      27 ..       5      33 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.3e-05
   PF11178.3 10 kideynpqtgkliKrtnYqdd 30
                kidey+ +t+  i ++ +  d
  MMETSP1325-20131115|8744_1  9 KIDEYDAETQGAIRKIMF--D 27
                789999999999999888..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|8745_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|8748_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.0   1.6       0.18   10.7   1.1    1.0  1  PF09469.5 Cordon-bleu domain
        2.8    6.0   5.4        2.8    5.9   3.7    1.0  1  PF09726.4 Transmembrane protein
          7    6.0   6.9        7.6    5.9   4.8    1.1  1  PF12114.3 Period protein 2/3C-terminal region


Domain annotation for each model (and alignments):
>> PF09469.5  Cordon-bleu domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.1     4e-05      0.18     273     345 ..       7      75 ..       3      78 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 4e-05
   PF09469.5 273 aksevkkrraPvPPkstsaavpavlPaavvvkalssdsedktpeevasvdasselsssledtdsdlqkkkrra 345
                  +s +kkr  P P  stsaa+  v      + + s d++ +++   +++ +++ +  s +++    +kk ++a
  MMETSP1325-20131115|8748_1   7 EESSTKKREKPEPIYSTSAATSGVSTS---IGTSSGDTNGSSS-ASGNTTSGAIKRASASGASGGTKKKAKHA 75 
                 68999************9998877654...3333344444433.33466777777777777776666665554 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   3.7   0.00063       2.8     282     384 ..      15      80 ..       2     100 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00063
   PF09726.4 282 sksksvqsyssklqeievkenvsnkskksseslagsaeelalkkdsnsssaeeksakskssksaktskrsksnsspkshksaagsvssssvkkneskdkkask 384
                  k + + s s+ ++ + +   +s++  + s+s +                                     +n+ + + k+a++s  s+ +kk+ ++ + ++ 
  MMETSP1325-20131115|8748_1  15 EKPEPIYSTSAATSGVSTSIGTSSGDTNGSSSAS-------------------------------------GNTTSGAIKRASASGASGGTKKKAKHAEGSGL 80 
                 2222222223333344444444444444444444.....................................45555555555555555555555444444443 PP

>> PF12114.3  Period protein 2/3C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.8    0.0017       7.6      24      79 ..      23      76 ..       4     102 .. 0.51

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0017
   PF12114.3 24 tgsaasgsgsskssslgsgSnkgsssgsssgssnsskyfgssdysseksekakksq 79
                t++a+sg   s s  ++sg ++gsss+s + +s   k  ++s +s  +++kak+++
  MMETSP1325-20131115|8748_1 23 TSAATSGV--STSIGTSSGDTNGSSSASGNTTSGAIKRASASGASGGTKKKAKHAE 76
                22222222..2222244455555555555555554444444544444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.60
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|8747_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-24   84.2   0.0    8.1e-24   84.0   0.0    1.0  1  PF02784.11 Pyridoxal-dependent decarboxylase, pyridoxal binding domain


Domain annotation for each model (and alignments):
>> PF02784.11  Pyridoxal-dependent decarboxylase, pyridoxal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   0.0   5.9e-28   8.1e-24      60     245 ..       3     200 ..       1     204 [. 0.83

  Alignments for each domain:
  == domain 1    score: 84.0 bits;  conditional E-value: 5.9e-28
                 CTT-CCCEEEE-SS--HHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCT......EEEEB-B-S-----TTSS-S---------BGGG..H..HHHHHHHHHHTT-EEEEEB--------CHHHHHHHHHHHHHHHHHHH........--SEEE--------TTS....SS-HHHHHHHHHHHHHHHHHH--TT-EEEE--- CS
  PF02784.11  60 agvsperiifanpcksrselrlaleaqvvvvtvdneeeLekvaklapel......elllRvkpdvdakahkklstgqedsKFGldlek..e..aeellkaakelelklvGvhfhvGSqisdleafvkAveearevfeelakelG..veelkiLdvGGGlgvdyte....aeeleeiaevinaaleevfeegvkevtiiaEpG 245
                 +g++p  i++ +pcks  el  al+ + v++++dn +eLe+v+++ +e+       ++lR++p v a+a  +ls + ++sKFG+ l +  +   ++l++ + +++  +  vh+h GS+  ++++++++++ a e+ e ++   G    +++++d+GGGl+v+         ++ e+a ++++a  ++f+   +  ++i+E G
  MMETSP1325-20131115|8747_1   3 LGFEPAGIVYDSPCKSIPELTFALK-EGVHLNIDNLQELERVRRILEEAaagstsVIGLRINPVVGAGAVANLSVATRKSKFGVVLGDagSaeRKQLVEILVQAD-FVSCVHVHTGSGGMSVTQMAQGAAAAVELAEIVNAARGpaQPKITVIDIGGGLPVSWGRdtpqSPSMGEYAGALQEAAPALFDG--TFDRVITEFG 200
                 6899*********************.556789**********************9*****************************887753222456778888888.8999********999999999888888888777766662234699**********98665555667778888888888888885..6667777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.54
# Mc/sec: 985.17
//
Query:       MMETSP1325-20131115|8749_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|8751_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       75  (0.00548566); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.55
# Mc/sec: 226.56
//
Query:       MMETSP1325-20131115|8752_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-08   34.9   0.1    3.9e-08   33.4   0.0    1.6  1  PF12796.2  Ankyrin repeats (3 copies)
    3.7e-08   32.6   0.2    2.1e-06   27.1   0.0    2.8  3  PF00023.25 Ankyrin repeat
    2.4e-05   24.0   0.0    0.00016   21.4   0.0    2.3  2  PF13606.1  Ankyrin repeat
    4.4e-05   23.4   0.1    9.8e-05   22.3   0.0    1.7  2  PF13857.1  Ankyrin repeats (many copies)
    6.1e-05   23.3   0.1      0.002   18.4   0.0    2.4  2  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.0   1.4e-11   3.9e-08      41      87 ..       2      48 ..       1      52 [. 0.95

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 1.4e-11
   PF12796.2 41 ivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87
                +v++L + ga+v+  d++g+tpL +A+r+ h ++++ L++++ad+n+
  MMETSP1325-20131115|8752_1  2 VVRVLAKLGANVERPDNNGHTPLAIAARQAHSDVIRQLVSSKADINQ 48
                7999*****************************************96 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.049   1.4e+02      17      33 .]       2      18 ..       1      18 [. 0.86
   2 !   27.1   0.0   7.6e-10   2.1e-06       1      30 [.      19      48 ..      19      49 .. 0.96
   3 ?   -1.4   0.0      0.79   2.2e+03      19      25 ..      94     100 ..      78     107 .. 0.62

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.049
                HHHHHHHTTSSTTHBHT CS
  PF00023.25 17 vvklLlsqGAdlnaqdd 33
                vv+ L + GA++   d+
  MMETSP1325-20131115|8752_1  2 VVRVLAKLGANVERPDN 18
                899********987775 PP

  == domain 2    score: 27.1 bits;  conditional E-value: 7.6e-10
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlna 30
                +G TPL +Aa+  + +v++ L+s  Ad+n 
  MMETSP1325-20131115|8752_1 19 NGHTPLAIAARQAHSDVIRQLVSSKADINQ 48
                7***************************97 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.79
                 HHHHHTT CS
  PF00023.25  19 klLlsqG 25 
                    +s+G
  MMETSP1325-20131115|8752_1  94 AACISHG 100
                 3445555 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.2   3.4e+03      17      28 ..       2      13 ..       1      14 [. 0.85
   2 !   21.4   0.0   5.8e-08   0.00016       1      29 [.      19      47 ..      19      48 .. 0.97

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 1.2
   PF13606.1 17 lveaLlengadi 28
                +v+ L + ga++
  MMETSP1325-20131115|8752_1  2 VVRVLAKLGANV 13
                789999999997 PP

  == domain 2    score: 21.4 bits;  conditional E-value: 5.8e-08
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                nG TpL +Aa++ + ++++ L+++ adin
  MMETSP1325-20131115|8752_1 19 NGHTPLAIAARQAHSDVIRQLVSSKADIN 47
                89**************************9 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   3.6e-08   9.8e-05       1      44 [.       6      48 ..       6      61 .. 0.84
   2 ?   -3.2   0.0       3.7     1e+04       3      14 ..      98     110 ..      97     116 .. 0.66

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 3.6e-08
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnl 44
                L++ g a+v + d++g tpL +Aa++ +++v+r L+   ad+n 
  MMETSP1325-20131115|8752_1  6 LAKLG-ANVERPDNNGHTPLAIAARQAHSDVIRQLVSSKADINQ 48
                56778.99***************************966666665 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 3.7
   PF13857.1   3 ehg.padvnatde 14 
                 +hg ++++ ++d 
  MMETSP1325-20131115|8752_1  98 SHGsHIVLRTLDS 110
                 6777777776664 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00063       1.7      16      42 ..       2      28 ..       1      30 [. 0.92
   2 !   18.4   0.0   7.5e-07     0.002       1      38 [.      20      58 ..      20      69 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00063
   PF13637.1 16 lvklLlekgidinrtdesGntaLhiAa 42
                +v+ L + g+++ r d++G t+L iAa
  MMETSP1325-20131115|8752_1  2 VVRVLAKLGANVERPDNNGHTPLAIAA 28
                7999*******************9998 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 7.5e-07
   PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGn.taL 38
                g+t+L  aa++ + ++++ L+++++din++ e+G+ t L
  MMETSP1325-20131115|8752_1 20 GHTPLAIAARQAHSDVIRQLVSSKADINQVLENGTrTIL 58
                689***************************655542655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 608.67
//
Query:       MMETSP1325-20131115|8753_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-11   43.4   5.6    1.7e-11   43.3   3.9    1.1  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.76   10.0   5.6         13    6.1   0.2    2.4  2  PF04277.8  Oxaloacetate decarboxylase, gamma chain
        5.8    6.2  10.2         24    4.2   7.1    1.9  1  PF13491.1  Domain of unknown function (DUF4117)


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   3.9   3.8e-15   1.7e-11      34     174 ..       2     151 ..       1     188 [. 0.83

  Alignments for each domain:
  == domain 1    score: 43.3 bits;  conditional E-value: 3.8e-15
  PF07690.11  34 igwlltlyslgyaiasllaGrlsdrfGrrrvlllglllfalglllllfasslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGailgpllggllasslgWravFlilailsllaavlvllll...........p 174
                 +g++  +ysl +a+++ ++   + ++ +  ++ ++++++a+g +++++a+s+++l++    +  +  g+l++a++a+++++++ ++ g  +g + +  s++ i+gp +gg++a   g  ++ +++ +l++ ++ +vll++            
  MMETSP1325-20131115|8753_1   2 MGFAGLCYSLSQALLAKPLIKKTKKY-PHLLMATCIVGLAVGRTITALAPSISFLFVGTGTVITFL-GVLNTAISATVSQIAASDQVGGFIGTIEGVESFSGIVGPTVGGVVAKTSGTFGPLIVVLALYASLTTVVLLYFktsvlsqiealA 151
                 6889999*****99999999999***.***************666665799998899999999988.9*********************************************999988999999999999988777887444444444441 PP

>> PF04277.8  Oxaloacetate decarboxylase, gamma chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.2    0.0029        13       6      28 ..      53      75 ..      48      84 .. 0.86
   2 ?    6.0   0.7    0.0031        14      20      72 ..     135     185 ..     121     188 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0029
   PF04277.8  6 elmliGMgiVFvfLilLiliisl 28
                  +++G g+V +fL +L  +is 
  MMETSP1325-20131115|8753_1 53 SFLFVGTGTVITFLGVLNTAISA 75
                56899************999985 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0031
   PF04277.8  20 ilLiliisllskvikkaapeekaekkaeeaakaesveekkeddpelvAaItaA 72 
                 +lL + +s+ls++ + a+ e+   ++a  a + ++   + e d+  +Aa++ A
  MMETSP1325-20131115|8753_1 135 VLLYFKTSVLSQIEALAKDEPVIDEPASVADANADHV-P-ETDATRAAAVALA 185
                 5788999999999666666666555555555544432.2.2666666666655 PP

>> PF13491.1  Domain of unknown function (DUF4117)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   7.1    0.0052        24     103     168 ..      78     148 ..      28     151 .. 0.67

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0052
   PF13491.1 103 saalaalrlasl..eatlpfgaGGllGrllagalltllgftGalllllvlllvgl...slvlgfswlelae 168
                 s + a+ ++ ++  + +   + +G++G +++g++ +  g +G l+++l+l +  +   +l++++s+l+ +e
  MMETSP1325-20131115|8753_1  78 SQIAASDQVGGFigTIEGVESFSGIVGPTVGGVVAKTSGTFGPLIVVLALYASLTtvvLLYFKTSVLSQIE 148
                 33444444444432335567899*********************999998887762224556666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       545  (0.0398625); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 943.87
//
Query:       MMETSP1325-20131115|8755_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 313.70
//
Query:       MMETSP1325-20131115|8754_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-48  164.4   0.1    2.9e-48  164.1   0.1    1.0  1  PF00016.15 Ribulose bisphosphate carboxylase large chain, catalytic domain


Domain annotation for each model (and alignments):
>> PF00016.15  Ribulose bisphosphate carboxylase large chain, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.1   0.1   2.1e-52   2.9e-48     209     309 .]       1     101 [.       1     101 [. 0.99

  Alignments for each domain:
  == domain 1    score: 164.1 bits;  conditional E-value: 2.1e-52
                 ----EE---------EE-----TTT----TTT----SEE-----------------HHHHHHHHHHH--.-HHHHHHHHSHHHHCHHHH----HHHH---- CS
  PF00016.15 209 lffeqdwaslkkvlpvasGGihvlrlpalleilGddvvlqfGGGtlGhpdGnaaGatanrvalealvearnegrdlaregkeilreaaklsgelkaalelW 309
                 lff+qdwasl+k++pvasGGih++++++ll++lGddvvlqfGGGt+GhpdG++aGatanrvalea+v arnegrd++ +g+eil++aa+++g+l++al+lW
  MMETSP1325-20131115|8754_1   1 LFFAQDWASLRKCMPVASGGIHCGQMHQLLNYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVIARNEGRDYVAQGPEILQDAARMCGPLQTALDLW 101
                 6**************************************************************************************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.64
# Mc/sec: 464.29
//
Query:       MMETSP1325-20131115|8756_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.74
# Mc/sec: 615.28
//
Query:       MMETSP1325-20131115|8759_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   10.7   0.3       0.15   10.5   0.2    1.2  1  PF03601.9 Conserved hypothetical protein 698


Domain annotation for each model (and alignments):
>> PF03601.9  Conserved hypothetical protein 698
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.2   1.1e-05      0.15     112     133 ..      91     112 ..      52     120 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 1.1e-05
   PF03601.9 112 kklalLvaaGssiCGasAilav 133
                  + ++L+ + ss+CGasA  a 
  MMETSP1325-20131115|8759_1  91 GASSALASVHSSVCGASAASAS 112
                 56789*************8775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 579.92
//
Query:       MMETSP1325-20131115|8761_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.3e-08   31.8   0.5    1.1e-05   24.8   0.3    2.8  1  PF06941.7 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)


Domain annotation for each model (and alignments):
>> PF06941.7  5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.3   8.3e-10   1.1e-05       3     151 ..      61     206 ..      59     215 .. 0.81

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 8.3e-10
   PF06941.7   3 irvlvDlDgVladfegklleiynrrfedelhlllEdvsgfwvleqyGvlkpelaeklarfvesrgfFldle.pipgaveaLreladek.deeviittsplqkydh.avkekveWvdkhlpgiplenivltkdKtvvr...aDllidDrpdnleke 151
                 ++++vDlDgVladf  +++            +++ dvs  + ++++ ++ ++    l      r +++ ++ +++++ e+   ++  +     ++t  p  k    a k+k++W +++l+       +l  +K+      aD+lidDr d  ++ 
  MMETSP1325-20131115|8761_1  61 MQIYVDLDGVLADFDRGFRTA--------TGMSPHDVSQDELWRRI-TTTKNFFGDLPFLDSGRALWKAIQaMVEDSSESGSTMSRPRlAPAKVLTGLPSGKLAKaARKQKMAWCRDNLGPDVEVITCLSSQKHHWCngpADILIDDRGDLRKHW 206
                 5799*********99887654........45677788888889999.677778888888888999999997469**********9865145678888888887776899************************98643449*******9866554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.70
# Mc/sec: 790.80
//
Query:       MMETSP1325-20131115|8762_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 185.92
//
Query:       MMETSP1325-20131115|8763_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-06   27.1   0.0    7.7e-06   25.5   0.0    1.8  1  PF00271.26 Helicase conserved C-terminal domain
  ------ inclusion threshold ------
      0.018   14.5   0.0      0.027   13.8   0.0    1.3  1  PF04430.9  Protein of unknown function (DUF498/DUF598)


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   1.1e-09   7.7e-06       3      78 .]      49     174 ..      47     174 .. 0.98

  Alignments for each domain:
  == domain 1    score: 25.5 bits;  conditional E-value: 1.1e-09
                 HHH----EEEE-TTS-HHHHHHHHHHHHTTTS..................................................SEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26   3 lekkgikvailhgelpqnereeileqfnagks..................................................kvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78 
                 le++gi++++++ + +q + ++ + +fn+++                                                    +l+  + a+ G++l+++++V  +++   + +  Q++ R++R+g
  MMETSP1325-20131115|8763_1  49 LEEEGISFVKITRGDSQAKTTKAVARFNSKSGlgsyvdytvnaiarfnstkyasrstatngpadqdqaeganqpdetvegahVFLLQASSAAAGLTLTAARHVLLMEPFLRKGEEEQALNRCHRIG 174
                 8999*************************999********************************************************************************************87 PP

>> PF04430.9  Protein of unknown function (DUF498/DUF598)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0     4e-06     0.027      40     103 ..      41     103 ..      15     107 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4e-06
   PF04430.9  40 seedlalllelapkpelliiGtGkrlrflppelreylselgigvevmdtraAartyNlLasegr 103
                 + +++a +le+ + + ++ i +G+++ + ++++ ++ s++g g  v  t +A++++N     +r
  MMETSP1325-20131115|8763_1  41 TIDHMASVLEE-EGISFVKITRGDSQAKTTKAVARFNSKSGLGSYVDYTVNAIARFNSTKYASR 103
                 56778888887.8********************************************8766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.63
# Mc/sec: 814.00
//
Query:       MMETSP1325-20131115|8764_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.67
# Mc/sec: 200.29
//
Query:       MMETSP1325-20131115|8760_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.2   0.0       0.26   11.3   0.0    1.4  1  PF09981.4 Uncharacterized protein conserved in bacteria (DUF2218)


Domain annotation for each model (and alignments):
>> PF09981.4  Uncharacterized protein conserved in bacteria (DUF2218)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.9e-05      0.26      12      48 ..     178     215 ..     171     221 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHH----SEE--.-S----EE-----EEEEEE CS
   PF09981.4  12 rylqqLckHfahkvevef.deeegrielplgeceLaae 48 
                 +y ++Lc+H+     ++   +++gr++++ g +eL++ 
  MMETSP1325-20131115|8760_1 178 KYRSRLCNHWDSSHGTNCpMKRKGRCDFAHGPVELRVP 215
                 899*******9988888724789**********99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.56
# Mc/sec: 1215.00
//
Query:       MMETSP1325-20131115|8765_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 699.74
//
Query:       MMETSP1325-20131115|8768_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.037   13.6   7.4      0.046   13.3   5.1    1.2  1  PF01456.12 Mucin-like glycoprotein
        4.9    6.1  10.2        5.3    6.0   7.1    1.1  1  PF11593.3  Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF01456.12  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   5.1   6.7e-06     0.046      65     115 ..      55     108 ..       9     124 .. 0.62

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 6.7e-06
  PF01456.12  65 sttittkttkattttttttttttateaPsdavttaeaPtttttr...apsrlre 115
                 +++ +t +++a++ +tttt t+ a+ aP++a   a + ++t  r   + s++re
  MMETSP1325-20131115|8768_1  55 AQASSTAASTAAAGPTTTTETAPAPRAPAEAAVRALSASPTAVRsgsEASSVRE 108
                 344555566666677777777778888887665554444444440003344443 PP

>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   7.1   0.00078       5.3     133     188 ..      48     100 ..      28     129 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00078
   PF11593.3 133 kksaksnaattsstanTpaaasvkkansasaPnatagv....Gsaattaaisattattpt 188
                 ++ +  +a+++s++a+T aa+++++ ++a+aP a a       sa+        ta  ++
  MMETSP1325-20131115|8768_1  48 RQDSSRPAQASSTAASTAAAGPTTTTETAPAPRAPAEAavraLSAS-------PTAVRSG 100
                 556677899999999****************998665422221111.......1222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       710  (0.051931); expected 273.4 (0.02)
Passed bias filter:                      408  (0.029842); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.43s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 637.43
//
Query:       MMETSP1325-20131115|8770_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   12.4   0.1      0.061   12.4   0.1    1.0  1  PF04227.7 Indigoidine synthase A like protein


Domain annotation for each model (and alignments):
>> PF04227.7  Indigoidine synthase A like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   4.5e-06     0.061      30      90 ..       5      65 ..       1      78 [. 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.5e-06
                HHHHHHHHHHHHHH---EE---------EEE---HHHHHHHHH---E..EE--TTHHHHHH CS
   PF04227.7 30 nlevareveeivreeGavpAtiavldGkikvGlseeelerlaeakkevaKvsrrdlavvva 90
                + e+  e e+ v+e+Gavp  +a+   +    l+ + +e+ a+a++e++ + +rdl  + a
  MMETSP1325-20131115|8770_1  5 ERETWDEAEQHVKEHGAVPHEVALPTVHYDSRLRGNAVETSASAAAEAVAAVERDLESLSA 65
                6788999*************************************99999999***987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 355.02
//
Query:       MMETSP1325-20131115|8771_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|8773_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-11   44.0   7.8    3.1e-09   36.3   0.2    2.9  2  PF13374.1  Tetratricopeptide repeat
      2e-08   33.9   5.4      2e-07   30.7   3.6    1.9  1  PF13424.1  Tetratricopeptide repeat
    1.4e-05   24.4   3.9     0.0062   16.1   0.1    2.3  2  PF13176.1  Tetratricopeptide repeat
    3.1e-05   23.4   6.2      0.019   14.7   0.2    2.3  2  PF07719.12 Tetratricopeptide repeat
    0.00015   22.0   7.2     0.0052   17.1   0.2    2.3  2  PF13428.1  Tetratricopeptide repeat
    0.00074   18.9   6.6      0.055   12.9   0.3    2.1  2  PF13414.1  TPR repeat
     0.0021   18.5   8.6      0.008   16.7   5.8    1.8  1  PF13432.1  Tetratricopeptide repeat
     0.0045   17.1   1.9       0.53   10.7   0.0    2.9  2  PF07721.9  Tetratricopeptide repeat
     0.0057   16.3   3.7      0.064   13.0   1.2    2.1  2  PF04212.13 MIT (microtubule interacting and transport) domain
  ------ inclusion threshold ------
      0.011   16.0   2.4        1.8    9.0   0.1    2.6  3  PF13174.1  Tetratricopeptide repeat
      0.068   12.8   2.7        1.6    8.5   0.1    2.6  3  PF13181.1  Tetratricopeptide repeat
      0.082   12.4   4.7       0.63    9.6   0.1    2.7  3  PF00515.23 Tetratricopeptide repeat
        5.5    7.9   5.9        1.4    9.6   0.4    2.6  2  PF02071.15 Aromatic-di-Alanine (AdAR) repeat


Domain annotation for each model (and alignments):
>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.2   2.9e-12   3.1e-09       1      42 []       2      43 ..       2      43 .. 0.97
   2 !    8.5   1.7    0.0016       1.6      15      33 ..      65      83 ..      44      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 2.9e-12
   PF13374.1  1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42
                t+ +  nLA++ +++g++e A +l+ ++l  +++ lG++HPd
  MMETSP1325-20131115|8773_1  2 TLGTKGNLANVMSNQGDLEGAAELYKAVLRAQEAQLGAEHPD 43
                788999***********************************8 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0016
   PF13374.1 15 rgryeeAlaleeealairr 33
                 g+++eA +l++ea+++++
  MMETSP1325-20131115|8773_1 65 NGERAEAAELYREAADMYE 83
                399*************997 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   3.6   1.9e-10     2e-07       9      77 ..       7      83 ..       1      84 [. 0.90

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 1.9e-10
   PF13424.1  9 nnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalg.......dydeAleylekAleiae 77
                 nla+v   +gd++ A ely+ +l    ++lg +hpdt+ +  nl++++++l        + +eA e++++A +++e
  MMETSP1325-20131115|8773_1  7 GNLANVMSNQGDLEGAAELYKAVLRAqEAQLGAEHPDTLGTKGNLGIALEELAakaetngERAEAAELYREAADMYE 83
                69************************999********************9997555554478*************97 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   5.9e-06    0.0062       4      34 ..       8      38 ..       7      40 .. 0.84
   2 !    9.7   0.3   0.00066       0.7      11      30 ..      64      83 ..      50      88 .] 0.77

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 5.9e-06
   PF13176.1  4 nLarlysrlgdyekAielyeraLaltkdpld 34
                nLa++ s++gd e A+ely++ L+  +++l+
  MMETSP1325-20131115|8773_1  8 NLANVMSNQGDLEGAAELYKAVLRAQEAQLG 38
                99***9***************7766666655 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00066
   PF13176.1 11 rlgdyekAielyeraLaltk 30
                  g++ +A+ely++a  + +
  MMETSP1325-20131115|8773_1 64 TNGERAEAAELYREAADMYE 83
                479***********655544 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.2   1.8e-05     0.019       6      30 ..       8      32 ..       6      35 .. 0.92
   2 !   11.3   0.9   0.00022      0.23       3      30 ..      54      81 ..      52      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.8e-05
                HHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAleafekAlel 30
                nl+++  ++gd+e A+e+++ +l+ 
  MMETSP1325-20131115|8773_1  8 NLANVMSNQGDLEGAAELYKAVLRA 32
                89*******************9985 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00022
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAlel 30
                al +l+  ++ +g+ +eA+e++++A   
  MMETSP1325-20131115|8773_1 54 ALEELAAKAETNGERAEAAELYREAADM 81
                78889999999**************876 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.2     5e-06    0.0052       6      34 ..       8      36 ..       3      53 .. 0.85
   2 !    8.2   1.4    0.0039       4.1       4      29 ..      55      80 ..      52      86 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 5e-06
   PF13428.1  6 alarallalGdpdeAiallrralalaPdd 34
                 la+++ ++Gd+++A++l++++l+++  +
  MMETSP1325-20131115|8773_1  8 NLANVMSNQGDLEGAAELYKAVLRAQEAQ 36
                69*********************976654 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0039
   PF13428.1  4 llalarallalGdpdeAiallrrala 29
                l +la+  + +G+ +eA++l+r+a+ 
  MMETSP1325-20131115|8773_1 55 LEELAAKAETNGERAEAAELYREAAD 80
                5678888899*************976 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.3   5.2e-05     0.055       8      49 ..       8      57 ..       6      59 .. 0.72
   2 !    9.6   1.7   0.00058      0.61       5      32 ..      54      81 ..      50      88 .] 0.85

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.2e-05
   PF13414.1  8 elGnalfkegdydeAieayekAleld.....pnnae...lyynlAlaylk 49
                +l+n+  ++gd+++A e+y+  l+ +      ++++      nl+ a+++
  MMETSP1325-20131115|8773_1  8 NLANVMSNQGDLEGAAELYKAVLRAQeaqlgAEHPDtlgTKGNLGIALEE 57
                79*********************875333334444444466666666665 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00058
   PF13414.1  5 alkelGnalfkegdydeAieayekAlel 32
                al el+ ++ ++g+ +eA e+y++A ++
  MMETSP1325-20131115|8773_1 54 ALEELAAKAETNGERAEAAELYREAADM 81
                78899********************875 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   5.8   7.6e-06     0.008       3      60 ..       9      81 ..       8      84 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 7.6e-06
   PF13432.1  3 lArallraGdydeAlaaleaalala........Peaaeallllaeallrl.......grldeAaallraalal 60
                lA+   ++Gd++ A+++++a+l+++        P+    + +l+ al +l       g+ +eAa+l+r+a++ 
  MMETSP1325-20131115|8773_1  9 LANVMSNQGDLEGAAELYKAVLRAQeaqlgaehPDTLGTKGNLGIALEELaakaetnGERAEAAELYREAADM 81
                6888889************************99999999999999999888999999************9865 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0    0.0005      0.53       5      23 ..       7      25 ..       4      28 .. 0.90
   2 ?    3.3   1.4      0.12   1.3e+02      14      26 .]      65      77 ..      54      77 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.0005
                ---HHHHHH-------HHH CS
   PF07721.9  5 laLArallalGdldeAral 23
                 +LA ++  +Gdl+ A++l
  MMETSP1325-20131115|8773_1  7 GNLANVMSNQGDLEGAAEL 25
                58**************998 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.12
                -------HHHHHT CS
   PF07721.9 14 lGdldeAraller 26
                 G+ +eA++l ++
  MMETSP1325-20131115|8773_1 65 NGERAEAAELYRE 77
                59********996 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.055        58      17      29 ..      15      27 ..      10      32 .. 0.90
   2 !   13.0   1.2   6.1e-05     0.064      11      36 ..      58      83 ..      50      85 .. 0.89

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.055
                HTT-HHHHHHHHH CS
  PF04212.13 17 eagkyeeAlelYk 29
                ++g++e A elYk
  MMETSP1325-20131115|8773_1 15 NQGDLEGAAELYK 27
                689*********8 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 6.1e-05
                HHHHHHHTT-HHHHHHHHHHHHHHHH CS
  PF04212.13 11 kAveaDeagkyeeAlelYkeAlelLl 36
                 A +a+ +g+ +eA elY+eA++ ++
  MMETSP1325-20131115|8773_1 58 LAAKAETNGERAEAAELYREAADMYE 83
                599*******************9886 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.1    0.0017       1.8       5      28 ..       8      31 ..       8      33 .. 0.91
   2 ?   -2.0   0.0       5.5   5.8e+03      25      33 .]      36      44 ..      35      44 .. 0.77
   3 ?    6.1   0.3     0.014        15       6      30 ..      51      82 ..      50      83 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0017
                HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAlealerlik 28
                +la ++ ++gd + A e+++ +++
  MMETSP1325-20131115|8773_1  8 NLANVMSNQGDLEGAAELYKAVLR 31
                689999999************997 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 5.5
                HHHHH-TT- CS
   PF13174.1 25 rlikeyPdS 33
                +l +e+Pd+
  MMETSP1325-20131115|8773_1 36 QLGAEHPDT 44
                677899996 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.014
                HHHHHHHH.......HHHHHHHHHHHHHHHH- CS
   PF13174.1  6 lalsyykl.......gdtdeAlealerlikey 30
                l+ ++++l       g+ +eA e++++  + y
  MMETSP1325-20131115|8773_1 51 LGIALEELaakaetnGERAEAAELYREAADMY 82
                55666664466666689*********988766 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0015       1.6       6      29 ..       8      31 ..       5      36 .. 0.91
   2 ?   -2.1   0.0       3.7   3.9e+03      11      22 ..      45      56 ..      43      59 .. 0.59
   3 ?    4.2   0.2     0.038        40      13      30 ..      64      81 ..      62      86 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0015
                T---HHHHTT-HHHHHHHHH---H CS
   PF13181.1  6 nlGdiYrqlGdydkAkeylekale 29
                nl+ ++ + Gd + A e ++ +l 
  MMETSP1325-20131115|8773_1  8 NLANVMSNQGDLEGAAELYKAVLR 31
                899*****************9996 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 3.7
                HHHTT-HHHHHH CS
   PF13181.1 11 YrqlGdydkAke 22
                +  +G+   A+e
  MMETSP1325-20131115|8773_1 45 LGTKGNLGIALE 56
                566777655554 PP

  == domain 3    score: 4.2 bits;  conditional E-value: 0.038
                HTT-HHHHHHHHH---HH CS
   PF13181.1 13 qlGdydkAkeylekalel 30
                 +G+  +A e +++a ++
  MMETSP1325-20131115|8773_1 64 TNGERAEAAELYREAADM 81
                5799999*******9887 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.1    0.0006      0.63       6      29 ..       8      31 ..       5      34 .. 0.91
   2 ?   -0.9   0.0       1.2   1.2e+03       6      13 ..      50      57 ..      47      60 .. 0.80
   3 ?    3.8   0.7     0.041        43       7      28 ..      58      79 ..      53      83 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0006
                HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23  6 nlGnaylklgkydeAleyyekALe 29
                nl+n+  ++g+++ A e y+ +L+
  MMETSP1325-20131115|8773_1  8 NLANVMSNQGDLEGAAELYKAVLR 31
                9999999*************9986 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 1.2
                HHHHHHHH CS
  PF00515.23  6 nlGnaylk 13
                nlG a+ +
  MMETSP1325-20131115|8773_1 50 NLGIALEE 57
                99999876 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.041
                HHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23  7 lGnaylklgkydeAleyyekAL 28
                l++    +g+  eA e y++A 
  MMETSP1325-20131115|8773_1 58 LAAKAETNGERAEAAELYREAA 79
                566666789999*******995 PP

>> PF02071.15  Aromatic-di-Alanine (AdAR) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       1.9     2e+03       8      12 .]      22      26 ..      19      27 .. 0.70
   2 ?    9.6   0.4    0.0013       1.4       1      12 []      71      82 ..      71      82 .. 0.97

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 1.9
  PF02071.15  8 Aaeiy 12
                Aae+y
  MMETSP1325-20131115|8773_1 22 AAELY 26
                77776 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.0013
  PF02071.15  1 AakhyeqAaeiy 12
                Aa++y +Aa++y
  MMETSP1325-20131115|8773_1 71 AAELYREAADMY 82
                9**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.67
# Mc/sec: 314.75
//
Query:       MMETSP1325-20131115|8772_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-10   39.2   0.1    3.8e-09   36.3   0.0    2.3  2  PF03455.14 dDENN domain
     0.0095   14.2   0.1      0.012   13.9   0.1    1.1  1  PF06862.7  Protein of unknown function (DUF1253)


Domain annotation for each model (and alignments):
>> PF03455.14  dDENN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   5.6e-13   3.8e-09       2      67 ..       6      79 ..       5      80 .. 0.87
   2 ?   -0.0   0.0      0.12   8.5e+02      27      44 ..     144     160 ..     139     167 .. 0.74

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 5.6e-13
  PF03455.14  2 dqqvreaFlrffasllggYrnflrkerkspe...vsFqkeaFlks.rskshr....sFlsrfletqmFaeFiee 67
                ++++r+a lrff+  ++gY +++  +  + +   + F++++F+k+    ++     + l ++  +qmF +F+++
  MMETSP1325-20131115|8772_1  6 ERELRAATLRFFVWCFQGYDKYVAVIGADGRlpeSLFDRAGFVKQaDHLKNDtqaqAALDKLTASQMFDRFVQD 79
                5799**********************98877899**********95554444666699*************996 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 0.12
  PF03455.14  27 erkspevsFqkeaFlksr 44 
                 +++ p  sF+k aF   r
  MMETSP1325-20131115|8772_1 144 ASRFPT-SFDKSAFGTVR 160
                 566776.9******7664 PP

>> PF06862.7  Protein of unknown function (DUF1253)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   1.8e-06     0.012     240     300 ..      44     106 ..      37     110 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.8e-06
   PF06862.7 240 lrgkvklkkkekkigvlek..vvlkvrqvFerieaesilkeedarlkfFtknvlpkltkeske 300
                 ++g+vk + + k+++  +    +l   q+F r+  + +++ + + +kfF +++++kl +++++
  MMETSP1325-20131115|8772_1  44 RAGFVKQADHLKNDTQAQAalDKLTASQMFDRFVQDIVTEPDRCEVKFFNESIVQKLNRSKTR 106
                 467777777766633333311467789******9999999999**************975544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 843.33
//
Query:       MMETSP1325-20131115|8774_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-06   27.6   1.0    2.9e-06   26.9   0.0    1.8  2  PF04945.8 YHS domain


Domain annotation for each model (and alignments):
>> PF04945.8  YHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   2.1e-10   2.9e-06      15      45 ..      75     105 ..      69     106 .. 0.92
   2 ?   -3.3   0.1      0.57   7.8e+03      19      25 ..     117     123 ..     116     124 .. 0.81

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 2.1e-10
                 ---EE----EE----HHHHHHHHTSHHHCTT CS
   PF04945.8  15 dykleYkGrlYhFcSegckdkFeadPekYan 45 
                 +++ +Y+G +++F++ ++++ Fea+P +Ya 
  MMETSP1325-20131115|8774_1  75 EFSATYMGYTFYFATSSNLALFEANPSQYAP 105
                 6899*************************97 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 0.57
                 E----EE CS
   PF04945.8  19 eYkGrlY 25 
                  Y+G+ Y
  MMETSP1325-20131115|8774_1 117 GYDGNNY 123
                 6999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.65
# Mc/sec: 530.89
//
Query:       MMETSP1325-20131115|8775_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   12.2   0.0      0.064   11.8   0.0    1.1  1  PF05067.7 Manganese containing catalase


Domain annotation for each model (and alignments):
>> PF05067.7  Manganese containing catalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.7e-06     0.064      49      85 ..      54      90 ..      48     104 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.7e-06
   PF05067.7 49 irdkekykdLlmdiatEElgHvEliatmiarllegat 85
                 rd e++++ l++ + EE++H+El+   +++l+e a 
  MMETSP1325-20131115|8775_1 54 RRDLERLHEGLAEHGFEEVAHLELLFRSVHLLTERAL 90
                6788999999***********************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.61
# Mc/sec: 487.13
//
Query:       MMETSP1325-20131115|8778_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       767  (0.0561001); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 451.08
//
Query:       MMETSP1325-20131115|8781_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        7.3    6.4   7.6        8.1    6.3   1.7    2.1  2  PF09954.4 Uncharacterized protein conserved in bacteria (DUF2188)


Domain annotation for each model (and alignments):
>> PF09954.4  Uncharacterized protein conserved in bacteria (DUF2188)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.2   0.00082        11      23      45 ..      17      39 ..       6      44 .. 0.83
   2 ?    6.3   1.7   0.00059       8.1      16      46 ..      35      65 ..      33      76 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.00082
   PF09954.4 23 ktfdTqeeAieaArelAkeqggs 45
                ++ +Tq++A + + ++A e+g+s
  MMETSP1325-20131115|8781_1 17 AKGRTQAAATKLGDARASEGGPS 39
                5679*************997766 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.00059
   PF09954.4 16 eggsrasktfdTqeeAieaArelAkeqggse 46
                egg  + +  ++q++A  +Arel +++ +++
  MMETSP1325-20131115|8781_1 35 EGGPSKGLSKTKQKAAERQARELGRAKVKAA 65
                67777888999************98854444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       566  (0.0413985); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.60
# Mc/sec: 327.50
//
Query:       MMETSP1325-20131115|8782_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   11.2   1.7       0.33   10.5   1.1    1.3  1  PF08384.5 Pro-opiomelanocortin, N-terminal region


Domain annotation for each model (and alignments):
>> PF08384.5  Pro-opiomelanocortin, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.1   2.4e-05      0.33       2      24 ..      55      77 ..      54      79 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 2.4e-05
   PF08384.5  2 CwehskCrdlssesnlleCiklC 24
                C e+ +C     ++n+leC   C
  MMETSP1325-20131115|8782_1 55 CKEKYNCDGTHLNANVLECLSPC 77
                *******************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.60
# Mc/sec: 331.50
//
Query:       MMETSP1325-20131115|8784_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|8780_1  [L=416]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-06   27.7   2.1    1.9e-06   27.7   1.5    1.9  2  PF00288.21 GHMP kinases N terminal domain


Domain annotation for each model (and alignments):
>> PF00288.21  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   1.5   1.4e-10   1.9e-06       6      67 .]       5      58 ..       2      58 .. 0.84
   2 ?   -2.7   0.0      0.41   5.6e+03      20      32 ..     106     118 ..     102     141 .. 0.52

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 1.4e-10
                ESS-TT----HHHHHHHHHHHHHHHHTT-SSHHHHHHHHHHHHHHTT----SHHH.HHHHHCT CS
  PF00288.21  6 sdiPigaGLGSSAalavalaaAllalyglpldeeelaklaleaekaigkpsGidv.aaavyGg 67
                +++P++aGL+SSAa  ++l+ Al +l+     +e l +l+ +a+       G++  + +++Gg
  MMETSP1325-20131115|8780_1  5 NTFPTAAGLASSAAGYACLVFALSKLF---CCKESLEDLSTVAR------QGSGSaCRSLFGG 58
                789************************...67778888888888......6666667777776 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.41
                 HHHHHHHHHHHHT CS
  PF00288.21  20 lavalaaAllaly 32 
                    ++++A  +l+
  MMETSP1325-20131115|8780_1 106 TGMGTSVATSRLL 118
                 4445555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.60
# Mc/sec: 1661.47
//
Query:       MMETSP1325-20131115|8785_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 651.81
//
Query:       MMETSP1325-20131115|8783_1  [L=309]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.61    8.6   7.6        1.2    7.7   5.3    1.5  1  PF10310.4 Protein of unknown function (DUF2413)


Domain annotation for each model (and alignments):
>> PF10310.4  Protein of unknown function (DUF2413)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.3     9e-05       1.2      21     110 ..       6      88 ..       3     131 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 9e-05
   PF10310.4  21 skaskkstkkdediLefLdeleksekakkkkkaeeaeka.etprvekkkskkkesekaskeekeakprkseeseesseekskapeteseee 110
                 ++a++++++++ed+L+ Ld  e++e+a ++   +++++a ++    +++ + + s +++++++++++  +++ + ++++      ++ +++
  MMETSP1325-20131115|8783_1   6 AAAKARAAQEAEDMLAMLDATEEQEAARTNAAMASKAAArDAA--RNASGMHSASPHRHHPNRSNAATVHTNANANAHA------NAHDDH 88 
                 6788899***************988877766333333220222..2222222222222222222222222222222222......222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       960  (0.0702165); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.41s 00:00:01.07 Elapsed: 00:00:00.60
# Mc/sec: 1234.12
//
Query:       MMETSP1325-20131115|8786_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 176.34
//
Query:       MMETSP1325-20131115|8789_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 193.55
//
Query:       MMETSP1325-20131115|8790_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        79  (0.00577823); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.54
# Mc/sec: 173.07
//
Query:       MMETSP1325-20131115|8779_1  [L=708]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-31  106.7   0.7      4e-31  106.0   0.5    1.4  1  PF00240.18 Ubiquitin family
    3.8e-17   61.6   0.4    8.9e-17   60.4   0.3    1.7  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
      3e-11   43.1   2.1    2.7e-06   26.8   0.0    3.4  3  PF13598.1  Domain of unknown function (DUF4139)
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.11   12.1   0.0    2.2  2  PF13019.1  Telomere stability and silencing
       0.13   11.9   0.0       0.31   10.7   0.0    1.6  1  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.0   0.5   1.5e-34     4e-31       1      69 []     213     281 ..     213     281 .. 0.99

  Alignments for each domain:
  == domain 1    score: 106.0 bits;  conditional E-value: 1.5e-34
                 EESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
  PF00240.18   1 ktlsgktitlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69 
                 ktl+gktit+++ psdt++  K+ki++kegip+dqqrLi++Gk+LeD+rtls+yniq++stlhlvlrlr
  MMETSP1325-20131115|8779_1 213 KTLTGKTITIRIHPSDTIEIAKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 281
                 89*****************************************************************87 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.3   3.2e-20   8.9e-17       1      72 []     208     278 ..     208     278 .. 0.98

  Alignments for each domain:
  == domain 1    score: 60.4 bits;  conditional E-value: 3.2e-20
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE- CS
   PF11976.3   1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvvi 72 
                 ++i +k+ +gk+++i++ p++t++  +++ ++k+gip+ +q+rLiF G++L++ +t+ d++i++++t+++v+
  MMETSP1325-20131115|8779_1 208 MQIYIKTLTGKTITIRIHPSDTIEIAKQKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 278
                 89************************************.******************************996 PP

>> PF13598.1  Domain of unknown function (DUF4139)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.1    0.0024       6.5       1      22 [.      48      69 ..      48      83 .. 0.85
   2 !    8.2   0.0   0.00045       1.2      23      52 ..     129     158 ..     122     166 .. 0.86
   3 !   26.8   0.0   9.8e-10   2.7e-06     118     230 ..     311     424 ..     297     458 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0024
   PF13598.1  1 lelsyqvrnAsWsPlYdlrldt 22
                l++sy+++  sW ++Y+l+l +
  MMETSP1325-20131115|8779_1 48 LTVSYVTPSHSWACSYRLELPP 69
                79****************9976 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00045
   PF13598.1  23 ekkevtltykaevsQntGeDWndvaLtLst 52 
                 +++ v ++ ++ +++   eDW++v L+L+ 
  MMETSP1325-20131115|8779_1 129 DAGMVAMSIYGLIRNTMEEDWDNVMLSLAA 158
                 46789999****************999975 PP

  == domain 3    score: 26.8 bits;  conditional E-value: 9.8e-10
   PF13598.1 118 eveksglsvtfkipgpvsvpsdgeahrvtiate.tlpaeleyvavPkl.deaAyltAevkntsglpllpGkasifldgafVgksrlelvapgeefelsfGvddavrverkllkkk 230
                 + +  g  + ++i+ pvs++++++ + v+ia++ +++ + ++v      + +A +  e++n+++l l pGk+s+f +g + + + ++ + pg++  +++G+d +v ver +++ +
  MMETSP1325-20131115|8779_1 311 QLSGAGEHIIYDIAVPVSLAANES-AVVPIASHlDIQGSRVLVYDHGEdQVSAIRSVELVNNTPLVLAPGKVSVFEGGRISAHAPFPPMLPGDDQLIAMGPDASVYVERSQERSR 424
                 566677778899999****98766.5888887525555544444444324689********************************************************998763 PP

>> PF13019.1  Telomere stability and silencing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -19.9  11.4         5   1.4e+04      87     102 ..     186     201 ..     185     203 .. 0.79
   2 ?   12.1   0.0   3.9e-05      0.11       1      93 [.     208     288 ..     208     294 .. 0.84

  Alignments for each domain:
  == domain 1    score: -19.9 bits;  conditional E-value: 5
   PF13019.1  87 GGKGGFGsqLraaGgr 102
                 GG GG G  L  +G+r
  MMETSP1325-20131115|8779_1 186 GGGGGGGGGLSSHGAR 201
                 7888888888888887 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 3.9e-05
   PF13019.1   1 invlvssldglslpktlsltlpstatvsdlvdklserlpaslteslvLtttsnkqlssssdlslssllsssedaeflslrlslrlcGGKGGFG 93 
                 +++ +++l+g    kt+++ ++++ t++ + +k++++ ++++++++++  +  kql  ++  +ls++  ++e+    +l+l+lrl+G  GG G
  MMETSP1325-20131115|8779_1 208 MQIYIKTLTG----KTITIRIHPSDTIEIAKQKIQDKEGIPPDQQRLIF-A-GKQL--EDGRTLSDYNIQKES----TLHLVLRLRGSDGGGG 288
                 6889999999....9**************************99865443.3.4566..788889999988888....899999**99888865 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00011      0.31      48      88 ..     245     279 ..     209     285 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00011
                 GGGEEEE----B--TTSBGGGGS--TTS-----EEEEEEE- CS
   PF13881.1  48 andlklilaGkiLednktLkelrlplgevkggvtvmHvvvr 88 
                 +++ +li aGk Led +tL++++++ +       ++H+v+r
  MMETSP1325-20131115|8779_1 245 PDQQRLIFAGKQLEDGRTLSDYNIQKES------TLHLVLR 279
                 44569*****************665554......4777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       585  (0.0427882); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.12u 0.43s 00:00:01.55 Elapsed: 00:00:00.75
# Mc/sec: 2262.16
//
Query:       MMETSP1325-20131115|8791_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|8792_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.31s 00:00:00.65 Elapsed: 00:00:00.44
# Mc/sec: 560.97
//
Query:       MMETSP1325-20131115|8794_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.4    5.7  18.1        4.2    5.4  12.5    1.3  1  PF05262.6 Borrelia P83/100 protein


Domain annotation for each model (and alignments):
>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  12.5   0.00031       4.2     246     344 ..       9     134 ..       1     177 [. 0.69

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.00031
   PF05262.6 246 qrkevreklqeaknlpepa..dvsskkedkkvaeekkreiekaqkeikkkdeeakkakdakaedlkkeskaeekeaedkeleakkereevae...........................Dlqkikeev 344
                 + +e r+k +++k+++++a  + ++kk+ ++v   k  e  ++ k ++ k e+++ a+d++a+++++e+  e  + +++  e  k ++++ +                            +++ k e 
  MMETSP1325-20131115|8794_1   9 KWDE-RRKAKAEKEAQKKAyeEAKNKKKYERVMGMKIPEKPRSTKAAQLKVEQVREARDNEAKEMAREAAREAAR-KKRLREVGKALQPIIDatyntagagagaggddgdaepgetlkqKMRRQKREM 134
                 3333.5566777888777722345556667788888889999999999999999999999999999996555555.5777788888888887777777777777777776655554333222333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1550  (0.11337); expected 273.4 (0.02)
Passed bias filter:                      573  (0.0419105); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.39s 00:00:01.05 Elapsed: 00:00:00.59
# Mc/sec: 873.25
//
Query:       MMETSP1325-20131115|8795_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 455.31
//
Query:       MMETSP1325-20131115|8796_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.63
# Mc/sec: 266.26
//
Query:       MMETSP1325-20131115|8797_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.5   0.7     0.0017   18.1   0.5    1.1  1  PF14282.1  FlxA-like protein
     0.0039   16.4   8.9     0.0042   16.3   6.1    1.1  1  PF12795.2  Mechanosensitive ion channel porin domain
  ------ inclusion threshold ------
      0.013   15.4   1.6        1.2    9.1   0.1    2.3  2  PF10458.4  Valyl tRNA synthetase tRNA binding arm
      0.027   14.1   8.8       0.22   11.2   1.9    2.2  2  PF02185.11 Hr1 repeat
      0.041   13.0   0.8      0.051   12.7   0.6    1.3  1  PF09325.5  Vps5 C terminal like
      0.045   12.8   6.5      0.054   12.5   4.5    1.1  1  PF13851.1  Growth-arrest specific micro-tubule binding
      0.046   13.5   0.5       0.38   10.5   0.1    2.0  2  PF05377.6  Flagella accessory protein C (FlaC)
      0.058   13.1   4.3       0.15   11.7   0.0    3.1  3  PF04508.7  Viral A-type inclusion protein repeat
      0.062   12.9   6.3      0.094   12.3   4.3    1.3  1  PF12325.3  TATA element modulatory factor 1 TATA binding
       0.08   12.2   3.7       0.15   11.3   2.6    1.5  1  PF06810.6  Phage minor structural protein GP20
       0.11   12.0   7.8       0.13   11.6   5.4    1.1  1  PF04156.9  IncA protein
       0.11   12.6   4.7        0.8    9.8   3.2    1.9  1  PF05615.8  Tho complex subunit 7
       0.12   12.2   7.2       0.16   11.8   5.0    1.2  1  PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
       0.14   12.0   5.1       0.33   10.8   0.2    2.1  2  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
       0.16   10.2   2.5       0.18   10.0   1.7    1.0  1  PF03961.8  Protein of unknown function (DUF342)
        0.2   11.1   5.1       0.26   10.7   3.5    1.3  1  PF03962.10 Mnd1 family
       0.21   10.9   7.4        6.1    6.2   5.2    2.1  1  PF04977.10 Septum formation initiator
       0.32   10.4   3.9         35    3.8   0.1    1.7  1  PF12761.2  Actin cytoskeleton-regulatory complex protein END3
       0.35   10.6  11.0        3.8    7.2   7.8    1.9  1  PF11559.3  Afadin- and alpha -actinin-Binding
       0.36   10.4   2.4       0.58    9.7   1.5    1.4  2  PF01105.19 emp24/gp25L/p24 family/GOLD
       0.68    9.9   7.8        8.6    6.4   2.5    2.2  2  PF14389.1  Leucine-zipper of ternary complex factor MIP1
       0.86    9.4  11.9        1.1    9.0   3.3    2.1  2  PF13863.1  Domain of unknown function (DUF4200)
          1    9.7   4.3        2.6    8.4   1.4    2.1  2  PF02672.10 CP12 domain
        1.8    7.3   7.8        3.2    6.5   3.7    1.6  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        2.2    8.0   5.3        3.3    7.4   0.5    2.2  2  PF00631.17 GGL domain
        2.3    7.6   5.6        2.7    7.4   3.9    1.1  1  PF05266.9  Protein of unknown function (DUF724)
        2.8    7.8   7.2        9.8    6.1   5.0    1.8  1  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        3.3    7.6   7.0        4.6    7.1   2.5    2.0  2  PF05103.8  DivIVA protein
        4.4    7.1   7.7        2.3    8.0   2.4    2.0  2  PF06210.6  Protein of unknown function (DUF1003)
        5.7    6.7   9.0        5.6    6.7   2.2    2.2  2  PF04350.8  Pilus assembly protein, PilO
        7.3    6.9   9.4         21    5.5   2.9    2.2  2  PF13600.1  N-terminal domain of unknown function (DUF4140)
        8.6    6.0   8.8         26    4.4   4.4    2.0  2  PF04612.7  Type II secretion system (T2SS), protein M


Domain annotation for each model (and alignments):
>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.5   3.9e-06    0.0017       8      82 ..      11      84 ..       7     100 .. 0.78

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 3.9e-06
   PF14282.1  8 tsssassgssdsqiksLqkqiqsltkqlkelssdeeltaeekqkqqqliqqQIqalqaQiaqlqsqqseeaqqsq 82
                +s+ ++ ++++s++++ +++i++l+ ql ++ + ++l  ++ ++ ++ +   ++ l+ Q+a lq+  s    +  
  MMETSP1325-20131115|8797_1 11 ASNYHARQNKESELAAAKNEIEQLEAQLHDMPRLQTLL-KREKAERSRLAGTVEHLEEQLANLQARTSRPGLNAP 84
                4666788999***********************77776.555677888999999999999999988776555555 PP

>> PF12795.2  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   6.1   9.7e-06    0.0042     143     215 ..       8      83 ..       1     100 [. 0.82

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 9.7e-06
   PF12795.2 143 getplseaqrtllqaelaalkaqieelelellsnnnrqeLl...rlqrdllkkkierleaelqaLqnainrkrlae 215
                 ++++ +   r+  + elaa k +ie+le++l     +q+Ll   +++r  l+  +e+le++l++Lq+  +r  l+ 
  MMETSP1325-20131115|8797_1   8 DQAASNYHARQNKESELAAAKNEIEQLEAQLHDMPRLQTLLkreKAERSRLAGTVEHLEEQLANLQARTSRPGLNA 83 
                 33667777888889***************************888899999****************9988766655 PP

>> PF10458.4  Valyl tRNA synthetase tRNA binding arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1     0.037        16       7      27 ..      16      38 ..      12      41 .. 0.75
   2 ?    9.1   0.1    0.0027       1.2       4      31 ..      53      80 ..      51      90 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.037
   PF10458.4  7 aRLeK..elaklekeierlqkKL 27
                aR++K  ela +++eie+l+  L
  MMETSP1325-20131115|8797_1 16 ARQNKesELAAAKNEIEQLEAQL 38
                67777335889999999998876 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0027
   PF10458.4  4 keraRLeKelaklekeierlqkKLsnpg 31
                +er RL  + + le +++ lq + s pg
  MMETSP1325-20131115|8797_1 53 AERSRLAGTVEHLEEQLANLQARTSRPG 80
                89*********************99998 PP

>> PF02185.11  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.9    0.0005      0.22      33      59 ..       9      41 ..       1      47 [. 0.80
   2 ?    7.1   0.3    0.0093         4      35      65 ..      48      78 ..      42      83 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.0005
                X......XXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF02185.11 33 s......vlqeaesklreseqkielLkeqLekl 59
                +      ++q  es+l  ++++ie+L+ qL ++
  MMETSP1325-20131115|8797_1  9 QaasnyhARQNKESELAAAKNEIEQLEAQLHDM 41
                144567789999******************998 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0093
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF02185.11 35 lqeaesklreseqkielLkeqLeklqkrsqn 65
                l ++ ++++ +   +e L+eqL+ lq+r++ 
  MMETSP1325-20131115|8797_1 48 LKREKAERSRLAGTVEHLEEQLANLQARTSR 78
                667788888888899************9875 PP

>> PF09325.5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.6   0.00012     0.051      20      76 ..      18      74 ..       2      96 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00012
   PF09325.5 20 eEeDewFedkkeeldslesqLkklykalellvsqrkeLasataelakslesLasvel 76
                + +++    +k+e+++le+qL+++ +   ll++++ e + +++ + +  e+La++  
  MMETSP1325-20131115|8797_1 18 QNKESELAAAKNEIEQLEAQLHDMPRLQTLLKREKAERSRLAGTVEHLEEQLANLQA 74
                556777888999**********99888888877766666655555555555655554 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   4.5   0.00013     0.054      44     116 ..       4      76 ..       1      81 [. 0.82

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00013
   PF13851.1  44 ekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqrf 116
                 ++++ ++a+    +++ + +L++a++e e+L+ +l +  + ++ Lk+ ka++ +l   +++l+ +   l+ r 
  MMETSP1325-20131115|8797_1   4 KRKRDQAASNYHARQNKESELAAAKNEIEQLEAQLHDMPRLQTLLKREKAERSRLAGTVEHLEEQLANLQART 76 
                 445555555556666778899********************************99999999999998888876 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1      0.14        58      20      38 ..      21      39 ..      16      41 .. 0.60
   2 ?   10.5   0.1   0.00088      0.38       7      37 ..      39      69 ..      30      74 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.14
   PF05377.6 20 rkeleelsksvekikenvk 38
                ++el   ++++e+++ +  
  MMETSP1325-20131115|8797_1 21 ESELAAAKNEIEQLEAQLH 39
                5566666666666665554 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00088
   PF05377.6  7 nklsklstvvatvrkeleelsksvekikenv 37
                 ++++l+t ++  ++e + l  +ve+++e+ 
  MMETSP1325-20131115|8797_1 39 HDMPRLQTLLKREKAERSRLAGTVEHLEEQL 69
                479*************************986 PP

>> PF04508.7  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00036      0.15       2      19 ..      23      40 ..      22      41 .. 0.90
   2 ?   -0.2   0.2       2.5   1.1e+03       3      13 ..      48      58 ..      48      59 .. 0.79
   3 ?    0.8   0.0       1.2     5e+02      10      18 ..      62      70 ..      61      72 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00036
   PF04508.7  2 EldrlRrkIsdLekqLsd 19
                El  ++++I++Le qL d
  MMETSP1325-20131115|8797_1 23 ELAAAKNEIEQLEAQLHD 40
                8899***********965 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 2.5
   PF04508.7  3 ldrlRrkIsdL 13
                l+r++ + s+L
  MMETSP1325-20131115|8797_1 48 LKREKAERSRL 58
                67899988887 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 1.2
   PF04508.7 10 IsdLekqLs 18
                ++ Le+qL+
  MMETSP1325-20131115|8797_1 62 VEHLEEQLA 70
                677999996 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   4.3   0.00022     0.094      28      86 ..      19      77 ..      14      96 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00022
   PF12325.3 28 rlEgElaslkeelarLekerdeareEivklteeneelkekkkeleelekeleeleqrye 86
                 +E+Ela+ k+e+++Le++ + + +    l +e  e + ++ ++e+le++l++l+ r +
  MMETSP1325-20131115|8797_1 19 NKESELAAAKNEIEQLEAQLHDMPRLQTLLKREKAERSRLAGTVEHLEEQLANLQARTS 77
                58*****************999988777777888888999****************986 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.6   0.00035      0.15      12      74 ..      14      72 ..       2      83 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00035
   PF06810.6 12 gkdiqeeKskldkaeeeldslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkkeey 74
                    q++ s+l++a++e+++l+ ql +     + Lk ++++ + L   +e l+e+ +    ++
  MMETSP1325-20131115|8797_1 14 YHARQNKESELAAAKNEIEQLEAQLHDMPRLQTLLKREKAERSRLAGTVEHLEEQLA----NL 72
                444456778888888899999999998888777888888999999999999999988....33 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   5.4   0.00031      0.13     118     178 ..       9      73 ..       2      78 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00031
   PF04156.9 118 lellq.eelksleerlesleesikelakeirelr...eeisdlkeevqelrselerlqedlqrlq 178
                 +   + ++++ +e++l +++ +i++l+++++++      ++++k+e  +l  ++e+l+e+l++lq
  MMETSP1325-20131115|8797_1   9 QAASNyHARQNKESELAAAKNEIEQLEAQLHDMPrlqTLLKREKAERSRLAGTVEHLEEQLANLQ 73 
                 33333699*************************97776666666666666666666666655555 PP

>> PF05615.8  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.2    0.0019       0.8      35      97 ..      15      76 ..       9      79 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0019
   PF05615.8 35 ilrgelseedklskedilkelaalelsilrlqfvletnekerenYeaekeeiektiealkdei 97
                ++r++  +e +++k +i+++ a+l+  + rlq++l+  + er++ +   e++e+++ +l+ ++
  MMETSP1325-20131115|8797_1 15 HARQNKESELAAAKNEIEQLEAQLH-DMPRLQTLLKREKAERSRLAGTVEHLEEQLANLQART 76
                3444444777777777777777776.4888888888888888888888888888888888776 PP

>> PF13094.1  CENP-A-nucleosome distal (CAD) centromere subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   5.0   0.00038      0.16      27      84 ..      15      75 ..       7      99 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00038
   PF13094.1 27 qekralerqlaaelksielLqeeirre...eaelekdeekleeLeknakalererkeeskn 84
                +++++ e++laa+++ ie+L+++++++   +  l++++ +  +L  +++ le++++ ++ +
  MMETSP1325-20131115|8797_1 15 HARQNKESELAAAKNEIEQLEAQLHDMprlQTLLKREKAERSRLAGTVEHLEEQLANLQAR 75
                6678899***************99865444999*******************999988876 PP

>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   4.7      0.11        48      47      99 ..      24      72 ..       6      77 .. 0.44
   2 ?   10.8   0.2   0.00077      0.33      10      52 ..      46      88 ..      39      95 .. 0.87

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.11
   PF10473.4 47 aenskaevetLktkieemaeelkdLeldLvsvrsekenLakelqekqervseL 99
                ++ +k e+e L++++  m     +L+  L   + e+  La  +++  e++ +L
  MMETSP1325-20131115|8797_1 24 LAAAKNEIEQLEAQLHDMP----RLQTLLKREKAERSRLAGTVEHLEEQLANL 72
                3334444444444443332....223333333333333333333333333333 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00077
   PF10473.4 10 ekLkesereadlLkdkvenLErELelseenqelvileaenska 52
                  Lk+++ e   L  +ve+LE  L  ++   ++ +l+a   k 
  MMETSP1325-20131115|8797_1 46 TLLKREKAERSRLAGTVEHLEEQLANLQARTSRPGLNAPSDKY 88
                569************************9999999888877665 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.7   0.00042      0.18     337     397 ..      18      75 ..       4      84 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00042
   PF03961.8 337 keleeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleae 397
                 ++ e el + ++e+e+l+++l+ +p     + l +++k++  +l  t e+l+e+l++l+a+
  MMETSP1325-20131115|8797_1  18 QNKESELAAAKNEIEQLEAQLHDMPR---LQTLLKREKAERSRLAGTVEHLEEQLANLQAR 75 
                 55567777778888888888888887...45677888999999999999999999999987 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.5   0.00062      0.26      64     126 ..      10      76 ..       2      92 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00062
  PF03962.10  64 kkklkteleklkkeleelkqrikelqaeieke....kkkreeteereelleelkeleeelkklkkel 126
                 + + + + ++ ++el+ +k++i++l+a++ +     +  ++e++er++l   ++ lee+l +l++  
  MMETSP1325-20131115|8797_1  10 AASNYHARQNKESELAAAKNEIEQLEAQLHDMprlqTLLKREKAERSRLAGTVEHLEEQLANLQART 76 
                 4555666777788888888888888888888732112224455899999999999999999999876 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.2     0.014       6.1      14      53 ..      12      51 ..       9      76 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.014
  PF04977.10 14 sgllalyqlkqeiaalqaelaklkaeneeLeaevkdLksd 53
                s+++a++++++e+aa ++e+++l+a+ +++ +   +Lk +
  MMETSP1325-20131115|8797_1 12 SNYHARQNKESELAAAKNEIEQLEAQLHDMPRLQTLLKRE 51
                789999999**************99999988888888644 PP

>> PF12761.2  Actin cytoskeleton-regulatory complex protein END3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.081        35      94     121 ..      51      78 ..      46      94 .. 0.73

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.081
   PF12761.2  94 tdwEevrLrreLaeLeeklekvqkesek 121
                 +  E  rL    ++Lee+l+++q+++++
  MMETSP1325-20131115|8797_1  51 EKAERSRLAGTVEHLEEQLANLQARTSR 78 
                 5568888888888888888888888765 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   7.8     0.009       3.8      49     115 ..       5      70 ..       1      78 [. 0.58

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.009
   PF11559.3  49 rdleqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklkneke 115
                 r ++q  s     +++e+e++  +++ie+l+ ql++  r  +ll ++e++ +++l+ + ++l ++  
  MMETSP1325-20131115|8797_1   5 RKRDQAASNYHARQNKESELAAAKNEIEQLEAQLHDMPRLQTLL-KREKAERSRLAGTVEHLEEQLA 70 
                 44455555555667788899999999999999999876644433.3344444444444444443333 PP

>> PF01105.19  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.5    0.0014      0.58     105     147 ..      16      58 ..       4      69 .. 0.81
   2 ?   -1.1   0.0       2.7   1.1e+03     109     126 ..      58      75 ..      52      77 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0014
  PF01105.19 105 kdsakkekletleselkkleekldsikreqkylrereerlrdt 147
                 +  +k+++l   ++e+++le +l+++ r q+ l++ +++  ++
  MMETSP1325-20131115|8797_1  16 ARQNKESELAAAKNEIEQLEAQLHDMPRLQTLLKREKAERSRL 58 
                 33567999*************************9998887655 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 2.7
  PF01105.19 109 kkekletleselkkleek 126
                  + ++e le++l +l+ +
  MMETSP1325-20131115|8797_1  58 LAGTVEHLEEQLANLQAR 75 
                 466778888888887765 PP

>> PF14389.1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   2.5      0.02       8.6       5      36 ..      19      50 ..      12      59 .. 0.74
   2 ?    5.4   0.1     0.039        17      68      83 ..      60      75 ..      53      78 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.02
   PF14389.1  5 assekrsaLeqeVkkLqkqLqdeekvreaLek 36
                +++ +  a ++e+++L+ qL+d   ++  L++
  MMETSP1325-20131115|8797_1 19 NKESELAAAKNEIEQLEAQLHDMPRLQTLLKR 50
                333444567999*******9999888888876 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.039
   PF14389.1 68 aevskLEqqllsLyrk 83
                 +v +LE+ql +L+ +
  MMETSP1325-20131115|8797_1 60 GTVEHLEEQLANLQAR 75
                5788888888888765 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   3.3    0.0026       1.1      63      98 ..       4      39 ..       1      44 [. 0.89
   2 ?    5.0   0.5     0.045        19      69      97 ..      48      76 ..      43      79 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0026
   PF13863.1 63 eraekkaeeekkekkekeeeikklkaqleelkaeie 98
                +r +  a++  +++++ke+e++ +k+++e+l+a+ +
  MMETSP1325-20131115|8797_1  4 KRKRDQAASNYHARQNKESELAAAKNEIEQLEAQLH 39
                57788999***********************99865 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.045
   PF13863.1 69 aeeekkekkekeeeikklkaqleelkaei 97
                 ++ek e+  +   +++l++ql++l+a+ 
  MMETSP1325-20131115|8797_1 48 LKREKAERSRLAGTVEHLEEQLANLQART 76
                57888999999999999999999999876 PP

>> PF02672.10  CP12 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   1.4    0.0061       2.6      10      45 ..       9      43 ..       3      54 .. 0.77
   2 ?    1.9   0.1      0.64   2.8e+02      28      48 ..      57      77 ..      47      92 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0061
  PF02672.10 10 keaeeacaeegansaecaaawdeveeLqaeashqre 45
                + a +  a + ++++e aaa +e+e L+a+  + ++
  MMETSP1325-20131115|8797_1  9 QAASNYHARQ-NKESELAAAKNEIEQLEAQLHDMPR 43
                4455555555.7999**************9888776 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.64
  PF02672.10 28 aawdeveeLqaeashqrekkk 48
                 +  +ve L+++ ++ +++++
  MMETSP1325-20131115|8797_1 57 RLAGTVEHLEEQLANLQARTS 77
                455566666666666655544 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   3.7    0.0075       3.2     100     142 ..       3      45 ..       1      56 [. 0.78

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0075
   PF10186.4 100 laqrrsdleasaqlekrraeqlaklqeeikrtksklnsleslt 142
                  +++r ++++++  +++++++la  ++ei++++++l+ + +l 
  MMETSP1325-20131115|8797_1   3 AKRKRDQAASNYHARQNKESELAAAKNEIEQLEAQLHDMPRLQ 45 
                 4555555559***************************976654 PP

>> PF00631.17  GGL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.5    0.0077       3.3       3      28 ..      18      44 ..      16      49 .. 0.83
   2 ?    2.9   0.3      0.19        81       3      29 ..      49      75 ..      47      81 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0077
  PF00631.17  3 qrikqlklklkreieqLkkeLer.eri 28
                q+++ + ++ k+eieqL+ +L+  +r+
  MMETSP1325-20131115|8797_1 18 QNKESELAAAKNEIEQLEAQLHDmPRL 44
                6677788899***********987887 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.19
  PF00631.17  3 qrikqlklklkreieqLkkeLererik 29
                +r+k+++ +l  ++e L+++L+    +
  MMETSP1325-20131115|8797_1 49 KREKAERSRLAGTVEHLEEQLANLQAR 75
                578899999999999999999875544 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   3.9    0.0064       2.7     113     179 ..       4      73 ..       1      78 [. 0.57

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0064
   PF05266.9 113 kklekeiaekeieqqeleseiaelerkilelrrkeall...kekkeaedkeiarlkseasklkqeledve 179
                 k++  ++a +   +q+ ese+a  +++i +l+ + + +   +   ++e++e +rl    ++l+++l +++
  MMETSP1325-20131115|8797_1   4 KRKRDQAASNYHARQNKESELAAAKNEIEQLEAQLHDMprlQTLLKREKAERSRLAGTVEHLEEQLANLQ 73 
                 4444444444455555566666666666666555554411144445666788888888888888887765 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.0     0.023       9.8      38     107 ..       4      72 ..       1      78 [. 0.57

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.023
                 HHHHHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--- CS
  PF02403.17  38 rrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaeleklllsiPNi 107
                 +r+  +++ +  a++N+ s+ ++ ak++ e+ e+ ++++  l++ lk  +ae + l   +e+l  ++ N+
  MMETSP1325-20131115|8797_1   4 KRKRDQAASNYHARQNKESE-LAAAKNEIEQLEAQLHDMPRLQTLLKREKAERSRLAGTVEHLEEQLANL 72 
                 45556666666666666553.3444444456666666666666666666666666666666665555554 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   2.5     0.011       4.6      84     128 ..       6      50 ..       1      53 [. 0.75
   2 ?    2.2   0.1      0.38   1.6e+02      40      60 ..      54      74 ..      50      80 .. 0.65

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.011
   PF05103.8  84 kkeaeliikeaekkaekiveeaeeeakkleteldelkrqsrlfra 128
                 k+ +     +a++++e+ ++ a++e+++le++l ++ r+++l ++
  MMETSP1325-20131115|8797_1   6 KRDQAASNYHARQNKESELAAAKNEIEQLEAQLHDMPRLQTLLKR 50 
                 44444555566667777789****************999998875 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.38
   PF05103.8 40 eneelkeeieeleekleeyke 60
                e ++l   +e+lee+l++++ 
  MMETSP1325-20131115|8797_1 54 ERSRLAGTVEHLEEQLANLQA 74
                556666667777777766654 PP

>> PF06210.6  Protein of unknown function (DUF1003)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.4    0.0054       2.3      59      99 ..       1      41 [.       1      50 [. 0.92
   2 ?    1.6   0.1      0.52   2.2e+02      76     102 ..      49      75 ..      43      80 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0054
   PF06210.6 59 rqadrdrvqaeedrevnlraeaeiealtrevaalrealgev 99
                r a+r r qa+++++  +++e e+ a  +e+++l+++l++ 
  MMETSP1325-20131115|8797_1  1 RAAKRKRDQAASNYHARQNKESELAAAKNEIEQLEAQLHDM 41
                7899*******************************999886 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.52
   PF06210.6  76 lraeaeiealtrevaalrealgevatr 102
                 +r++ae ++l+  v++l+e+l++ ++r
  MMETSP1325-20131115|8797_1  49 KREKAERSRLAGTVEHLEEQLANLQAR 75 
                 567788888888888888888776665 PP

>> PF04350.8  Pilus assembly protein, PilO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.2     0.013       5.6       4      42 ..       3      41 ..       1      47 [. 0.90
   2 ?    3.7   0.3      0.11        46       1      38 [.      48      75 ..      43      89 .. 0.61

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.013
   PF04350.8  4 aeakeeelkkefeekkekaanLealkkqleeleeefeel 42
                a++k+ +  ++++++++k ++L a k+++e+le++++ +
  MMETSP1325-20131115|8797_1  3 AKRKRDQAASNYHARQNKESELAAAKNEIEQLEAQLHDM 41
                6788999999*************************9887 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.11
   PF04350.8  1 lekaeakeeelkkefeekkekaanLealkkqleeleee 38
                l++++a++++l  ++e+ +e+ anL+a          +
  MMETSP1325-20131115|8797_1 48 LKREKAERSRLAGTVEHLEEQLANLQA----------R 75
                344555555555555555555555554..........4 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   2.9     0.049        21      65      89 ..      17      41 ..       2      53 .. 0.62
   2 ?    5.0   0.7      0.07        30      77     104 .]      46      73 ..      39      78 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.049
   PF13600.1 65 adaaseelaeleaelraledelarl 89
                ++ ++ ela++++e+++le++l   
  MMETSP1325-20131115|8797_1 17 RQNKESELAAAKNEIEQLEAQLHDM 41
                3555667777777777777777654 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.07
   PF13600.1  77 aelraledelarleaekealeariafls 104
                   l++ ++e++rl  + e le ++a l+
  MMETSP1325-20131115|8797_1  46 TLLKREKAERSRLAGTVEHLEEQLANLQ 73 
                 4444444444444444444444444443 PP

>> PF04612.7  Type II secretion system (T2SS), protein M
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   4.4     0.061        26      41      83 ..      15      58 ..       2      68 .. 0.52
   2 ?    4.3   0.4     0.064        27      45      86 ..      50      91 ..      44      98 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.061
                XXXXXXXXXXXXXXXXXXXX-----------.-----------H CS
   PF04612.7 41 erieeaqaelpklrqqlawleeqaaevralr.aaggsalsgaal 83
                +++++ ++el+++++++++le+q++++ +l+   ++++++   l
  MMETSP1325-20131115|8797_1 15 HARQNKESELAAAKNEIEQLEAQLHDMPRLQtLLKREKAERSRL 58
                44555555555555555555555555555554444444444444 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.064
                XXXXXXXXXXXXXXXX----------------------HHHH CS
   PF04612.7 45 eaqaelpklrqqlawleeqaaevralraaggsalsgaalaql 86
                + +ae  +l+ +++ leeq+a+++a+ +++g ++ + + +++
  MMETSP1325-20131115|8797_1 50 REKAERSRLAGTVEHLEEQLANLQARTSRPGLNAPSDKYEDA 91
                566778888889999999999999988888777666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1413  (0.10335); expected 273.4 (0.02)
Passed bias filter:                     1047  (0.0765799); expected 273.4 (0.02)
Passed Vit filter:                       173  (0.0126536); expected 13.7 (0.001)
Passed Fwd filter:                        35  (0.00255998); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.60
# Mc/sec: 415.37
//
Query:       MMETSP1325-20131115|8798_1  [L=307]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00033   20.2   0.4    0.00073   19.1   0.0    1.8  2  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       0.4   5.4e+03      30      45 ..      53      66 ..      52      75 .. 0.56
   2 !   19.1   0.0   5.3e-08   0.00073       3      37 ..     238     272 ..     236     300 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.4
                TTT--SCCHHHHHHHH CS
  PF00226.26 30 PDknkddeeeaeekfk 45
                PD  +d+   ++++++
  MMETSP1325-20131115|8798_1 53 PDETDDER--EKRRWQ 66
                78866655..333333 PP

  == domain 2    score: 19.1 bits;  conditional E-value: 5.3e-08
                 HHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCC CS
  PF00226.26   3 YeiLgvpkdasdeeIkkaYrklalkyHPDknkdde 37 
                 ++i gv+ da  e  kka r  +l++HPDk+ +  
  MMETSP1325-20131115|8798_1 238 FDIIGVDDDAPREAKKKALRAASLRWHPDKFVQTY 272
                 89****************************87665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1256  (0.0918666); expected 273.4 (0.02)
Passed bias filter:                      556  (0.0406671); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.49
# Mc/sec: 1501.39
//
Query:       MMETSP1325-20131115|8799_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.4   10.2  10.3       0.46   10.0   7.2    1.0  1  PF08648.7 Protein of unknown function (DUF1777)


Domain annotation for each model (and alignments):
>> PF08648.7  Protein of unknown function (DUF1777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   7.2   3.3e-05      0.46      34      91 ..       1      54 [.       1      59 [. 0.62

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 3.3e-05
   PF08648.7 34 eRereRsrsreRdrarrrsRsrderrsrrsrSprr.lksgrersrsrsierrrdRkeer 91
                eRereR+r+r+Rd     sR +  +r  r++ ++  + + ++r +sr + ++ +R+++ 
  MMETSP1325-20131115|8799_1  1 ERERERERERDRDG---YSRLETSAR--RNEFREGdTVEAQYRGKSRYYPGKINRDNRD 54
                45666666666665...555555544..3333332246788999999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|8800_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 654.39
//
Query:       MMETSP1325-20131115|8802_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.09   12.5   2.8       0.13   12.1   1.9    1.3  1  PF13670.1 Peptidase propeptide and YPEB domain


Domain annotation for each model (and alignments):
>> PF13670.1  Peptidase propeptide and YPEB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.9   9.3e-06      0.13       3      43 ..      12      55 ..      10      66 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 9.3e-06
   PF13670.1  3 alalaaalla...aaAlAkddtdapkadwlsreavqakleaqGy 43
                a+a+aaa+++   ++A+A  d + ++ +++  e+v+a + aqG 
  MMETSP1325-20131115|8802_1 12 AAAAAAAAVGhgvGVAAAHGDRSRDQGTETETETVRALALAQGQ 55
                45555555556788888888888888888889999999988884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       448  (0.0327677); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 420.49
//
Query:       MMETSP1325-20131115|8803_1  [L=236]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-30  103.7   0.0    1.2e-29  103.3   0.0    1.1  1  PF00481.16 Protein phosphatase 2C
    4.1e-05   23.2   0.0    0.00012   21.7   0.0    1.7  2  PF07228.7  Stage II sporulation protein E (SpoIIE)
  ------ inclusion threshold ------
      0.086   12.1   0.0       0.21   10.8   0.0    1.7  1  PF13672.1  Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.3   0.0   2.6e-33   1.2e-29     109     249 ..       2     171 ..       1     174 [. 0.96

  Alignments for each domain:
  == domain 1    score: 103.3 bits;  conditional E-value: 2.6e-33
                 ESSSEEEEEEE---EEEEEE---EE..EESS---STTSHHHHHHHHH----EE-T--EE---....................................BSBSB----HHHC---ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHHHHHHHHHHHHHHHTHHHHHTS-SSHHHH CS
  PF00481.16 109 irgqklyvAnvGDSravLcrsdnak..keltedHkpsnedEreRIeeaggsvsngngRvngs....................................LavsRalGdfelkpkekeqlvsaePdvtsvkideedefliLasDGlwdvlsdqeavdlvrselskkkspmeaaeelvdeai 249
                 i g+ l+vAn+GDSra++++ +++   + l+ d++p+++dEr+R+ +ag +++ ++g++ g+                                     a +R+lGd e  +      v aeP++++++++++d+fl ++sDG+++ l++++++ +v+++ +    p  a+++lv+e++
  MMETSP1325-20131115|8803_1   2 ILGKALFVANCGDSRAIMASGTDSLtsVPLSHDQTPYRKDERDRVMRAGARIM-NMGQMEGMvprqspdswgdikigenpdedhdpprvwhktephpgAAFTRSLGDAEAEK----LGVFAEPEIHVRELEQKDQFLCVMSDGVTEFLTNETICKMVKKHPD----PLPACKQLVEESY 171
                 56788*******************999**************************.6********************************************************8....89******************************************77....9*******99986 PP

>> PF07228.7  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.36   1.6e+03     127     155 ..      19      48 ..       7      54 .. 0.70
   2 !   21.7   0.0   2.6e-08   0.00012      83     191 ..      84     190 ..      82     192 .. 0.64

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.36
                 EEEE-----S--.HHHHHH....HHHHHT- CS
   PF07228.7 127 lllyTDGvtEar.dpdgelfgkerllalla 155
                 +   TD +t  + + d++ ++k+++ ++++
  MMETSP1325-20131115|8803_1  19 MASGTDSLTSVPlSHDQTPYRKDERDRVMR 48 
                 455677777777777777777777766655 PP

  == domain 2    score: 21.7 bits;  conditional E-value: 2.6e-08
                 ----EEE-TTS......-EEE-----------.--.----EEE------EEEEE-----S--HHHHHH....HHHHHT----------HHHHHHHHHHH..HCT----S-EEEEEEE CS
   PF07228.7  83 hpppllvrpdg......gtkfllvstglplGilpeadyeeaelqlepgdllllyTDGvtEardpdgelfgkerllallaeaegesleelldalveelle..lgsgeleDDitllvlr 191
                 h pp ++++ +       t+ l +++   lG+++e ++ ++el+ ++++ l++++DGvtE    ++e       ++++++++  ++   +++lvee  +  l+ + ++DDit++++ 
  MMETSP1325-20131115|8803_1  84 HDPPRVWHKTEphpgaaFTRSLGDAEAEKLGVFAEPEIHVRELE-QKDQFLCVMSDGVTEFL--TNE-----TICKMVKKHP--DPLPACKQLVEESYQawLDMDYRTDDITVICIY 190
                 66777777744555433333333333444788888777777777.447788999*****976..223.....3578888553..4666666666666666755559********986 PP

>> PF13672.1  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   4.6e-05      0.21     151     210 ..     116     175 ..       2     176 .. 0.68

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 4.6e-05
   PF13672.1 151 daeeelrvrrlklepvdalllmTDGlsnslrdeeafapllkelleeleeeg..aaeeLaelL 210
                  ae+e +vr+l+ ++ + l++m+DG+ + l+ +e   +++k+  + l++ +   +e+ +++L
  MMETSP1325-20131115|8803_1 116 FAEPEIHVRELE-QKDQFLCVMSDGVTEFLT-NETICKMVKKHPDPLPACKqlVEESYQAWL 175
                 345555999999.6689*********86665.444445555444444444444445555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.33s 00:00:00.88 Elapsed: 00:00:00.81
# Mc/sec: 698.20
//
Query:       MMETSP1325-20131115|8805_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   12.9   0.2       0.45   10.5   0.0    2.1  2  PF06985.6 Heterokaryon incompatibility protein (HET)


Domain annotation for each model (and alignments):
>> PF06985.6  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   3.3e-05      0.45      40      59 ..       9      28 ..       2      39 .. 0.80
   2 ?   -0.4   0.0     0.079   1.1e+03      94     108 ..     156     170 ..     128     219 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 3.3e-05
   PF06985.6 40 dgerylWiDaiCInqdddae 59
                + e ++W D+ CI+q++ ++
  MMETSP1325-20131115|8805_1  9 RREPTFWLDKACIDQENIQD 28
                56789***********8764 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.079
   PF06985.6  94 alralkkesleeees 108
                 ++r++++   ee+e 
  MMETSP1325-20131115|8805_1 156 SIRQMAEAVIEEQER 170
                 222222222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       670  (0.0490053); expected 273.4 (0.02)
Passed bias filter:                      510  (0.0373025); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.42s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 987.97
//
Query:       MMETSP1325-20131115|8801_1  [L=424]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-40  136.7   0.0    4.9e-39  134.1   0.0    1.9  1  PF00144.19 Beta-lactamase


Domain annotation for each model (and alignments):
>> PF00144.19  Beta-lactamase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.1   0.0   3.5e-43   4.9e-39      41     317 ..       5     400 ..       2     410 .. 0.86

  Alignments for each domain:
  == domain 1    score: 134.1 bits;  conditional E-value: 3.5e-43
                 TBESSTTSBEE-GGTHHHHHHHHHHTTTCTGG...TTSBGGGGST...TG.SGTTCSCBHHHHHTTHHHH.BSS.HTTCHSHHH..HHHHHHHHHG..SS....EE.--TTTHH.HHHHHCCHHHH.HHHHHHHHHHTTTT..........TTSTTEESSHHGGGGGGBEEEC.CTT....EE....HHHH.................................................................................................................EEEHHHHHHHHHHHHHTGGGSSSHHHHHHHCHCHSEEEE--SEEE--........EEESSEEHHHHH.SEEEEE..SSTCEEEEEEGGGTEEEEEEESSSS.HHH CS
  PF00144.19  41 grpvtadtlfriaSvtKtftaaavlqlveeGkl.dLddpVskylP...efagpgkgkiTlrdLltHtsGlpdlfasdlleeaaadaaellralatlppkyapGtkwgYsntgyg.llgellekvtg.rsleqllreeilrp..........Lgmkdtelgppesgdprdaagytgngpearappanlpaeae...........................................................................................................gagglistardlarflglalegglllsaetlaqltaklssgttrpagiragl........glGwvladktga.pgtfghtGggygtyvfvdpeanlvvavltnrdppned 317
                 +rpvt+dtlf  +SvtK++ta+av++lv ++++ ++d++V + +P   + +g++k+++T+++ l HtsGl+   + d   ++ +d+  + ra++ ++p ++pG+ ++Y+ +++g l + l+e+vtg  s++q++ ++i++p          L   +t++++ ++ +++ +++y      +r+ +a      +                                                                                                           +a+++  +a  la f+  al +g+l+ + +l+ ++a +++    + + ra+         g+G+++ +k g+  +++gh G  +g+    d e++++va+ +n+  p ++
  MMETSP1325-20131115|8801_1   5 PRPVTTDTLFNAFSVTKAITATAVHMLVADQRIpSYDTKVVEFWPkfgDGGGERKQRVTVAHILAHTSGLASAGPTDNSPQGFSDWTAVKRAMELAEPISEPGESCAYHMLTFGwLCAGLVEAVTGgASIQQFVHQRIATPlgltphffmgLPTDSTGMKSTDERRKNGKRLY------GRGLTAS-----DpakegplselldrcatlsfpmfeqlassglglqrgaadgaigdtlkeqaaafhgingsingsingsnngsgeegeldlsamgdrikgkehlldlrlwnhrimrcgthPAANGHFSAQALALFYHHALIQGQLVPPHVLKSAIACRRREDSLTKLARAATgvdldigfGMGYQVFPKAGDrFTGVGHFG-VGGSLALCDLESGVCVAITCNKIAP-DS 400
                 78**********************88887777659**********99999999*****************9999999999999999***************************************65**************33333333333333344444444444444444......2223333.....23345588888*****************************************************************************************************************88888999999999999977777777777777777677777777************889999999.*********************9776.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.41s 00:00:01.14 Elapsed: 00:00:00.59
# Mc/sec: 1722.13
//
Query:       MMETSP1325-20131115|8804_1  [L=851]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   15.0   9.3       0.52   10.1   2.1    2.8  3  PF01485.16 IBR domain


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.41   5.6e+03      41      47 ..     627     633 ..     605     639 .. 0.70
   2 ?    8.0   0.1   0.00017       2.4      44      62 ..     775     793 ..     724     795 .. 0.89
   3 ?   10.1   2.1   3.8e-05      0.52      17      50 ..     813     843 ..     797     846 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 0.41
  PF01485.16  41 vtCskCg 47 
                 ++Cs+C 
  MMETSP1325-20131115|8804_1 627 IRCSDCD 633
                 5566554 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.00017
  PF01485.16  44 skCgfefCflCkkewHegl 62 
                 ++C + +Cf+Ck e H+g 
  MMETSP1325-20131115|8804_1 775 PCCYQPMCFKCKTEGHHGA 793
                 6799**********99875 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 3.8e-05
  PF01485.16  17 elk..wCprpdCeaiiekekgakkssvtCskCgfef 50 
                 ++    Cp+  C+ +   ++g+++  + C  Cg+++
  MMETSP1325-20131115|8804_1 813 SIDaqFCPA--CGVATIRSQGCNH--IICV-CGHNW 843
                 332349*99..*************..****.**975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (851 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.26u 0.36s 00:00:01.62 Elapsed: 00:00:00.79
# Mc/sec: 2581.39
//
Query:       MMETSP1325-20131115|8806_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0049   16.6   1.2      0.041   13.7   0.2    2.1  2  PF03057.9 Protein of unknown function
  ------ inclusion threshold ------
       0.11   12.5   0.1       0.15   12.1   0.1    1.3  1  PF09952.4 Uncharacterized protein conserved in bacteria (DUF2186)


Domain annotation for each model (and alignments):
>> PF03057.9  Protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.027   1.9e+02       7      14 ..       8      15 ..       4      57 .. 0.54
   2 !   13.7   0.2     6e-06     0.041       7      41 ..      92     126 ..      86     134 .. 0.56

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.027
   PF03057.9  7 thDPnYqt 14
                 +DP+Y t
  MMETSP1325-20131115|8806_1  8 AQDPDYAT 15
                44444444 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 6e-06
   PF03057.9   7 thDPnYqtLaglnndvfekkdgaaaaggagPkapa 41 
                   DP Y  + g+ n+v++  ++a  +g+ + +a+a
  MMETSP1325-20131115|8806_1  92 SSDPSYESIKGIYNNVMQTVEQANKGGSQAQAAGA 126
                 45666666666666666666664444444444444 PP

>> PF09952.4  Uncharacterized protein conserved in bacteria (DUF2186)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   2.2e-05      0.15       7      68 ..      43     101 ..      40     127 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.2e-05
   PF09952.4   7 rLldeWaeaYptrlkpklkllrfkadeknwweeveleaakAalgGeaAaakliselkpesat 68 
                 ++l eWa++++t +++k      +      w+++ +e +k a+gG+ A ++  s+  +es++
  MMETSP1325-20131115|8806_1  43 NMLMEWAANHTTEQGRKPVSGPKSV---GHWKDYAAERFKSAWGGFLARPDASSDPSYESIK 101
                 6899********9998876665554...55******************99988876666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 670.00
//
Query:       MMETSP1325-20131115|8808_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.3   0.0      0.022   14.7   0.0    1.4  1  PF08883.6 Dopa 4,5-dioxygenase family


Domain annotation for each model (and alignments):
>> PF08883.6  Dopa 4,5-dioxygenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.6e-06     0.022      42     100 ..      59     119 ..      23     123 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.6e-06
                 --SSEEEEEEE-HHHHHHH---HHHH-----EEEEEE---...HHHHHHHS-EEE------- CS
   PF08883.6  42 PHpvasfelafkaekfeklvewlqlnrgkLsvliHpetgd...dlkdHteralWlGekleld 100
                  H ++ fe+ + +++fe +++wl+ +r++L  l  p+  +   d++     ++W+G++ ++d
  MMETSP1325-20131115|8808_1  59 LHLTKDFEIYVPNDDFELVLPWLMEHRDELF-LGYPVDVKitpDVECADAVTAWIGQEPAMD 119
                 59999***********************995.334433221224444455666777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 709.69
//
Query:       MMETSP1325-20131115|8809_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|8807_1  [L=364]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-21   74.5   0.1    3.2e-20   72.0   0.0    2.1  2  PF00651.26 BTB/POZ domain
  ------ inclusion threshold ------
       0.13   12.0   0.3       0.39   10.4   0.0    1.9  2  PF07707.10 BTB And C-terminal Kelch


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   0.0   4.7e-24   3.2e-20       2     110 ..     168     279 ..     167     280 .. 0.90
   2 ?    0.2   0.0     0.098   6.7e+02      82     110 ..     283     311 ..     279     312 .. 0.85

  Alignments for each domain:
  == domain 1    score: 72.0 bits;  conditional E-value: 4.7e-24
                 HHHHHTT-S--EEEEETT.TEEEEE-HHHHHHH-HHHHHHTTTTTTTT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC....ECCHHHHHHHHHHHHT-HHHHCHHHHHHHH- CS
  PF00651.26   2 nelreqgelcDvtlvvgd.gkefkahkavLaarSpyFkalftggeieestvseieledvepevfealLefiYtgeleit...seenveelLaaadllqiprlkdaceeflkes 110
                 ++ +++g  +D+ ++vg   +ef ahk++L++rSp+Fk lf ++ + ++   ++++ d ++evf +lL +iYtge++ +     ++   lL aa  +q+++l ++ce +l+++
  MMETSP1325-20131115|8807_1 168 KATLDSGYASDILFHVGHtPHEFAAHKLILSMRSPFFKVLFASS-MHNAPGAIVRITDTDHEVFAELLMWIYTGEVSAEaleAIDMPGRLLVAATEYQCTALARICEVKLCKT 279
                 5667888899*******98789**********************.8999999***************************996555666777888****************986 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.098
                 CHHHHHHHHHHHHT-HHHHCHHHHHHHH- CS
  PF00651.26  82 enveelLaaadllqiprlkdaceeflkes 110
                 env   L +ad+ + ++lk+ c  f+k++
  MMETSP1325-20131115|8807_1 283 ENVTLRLVLADKTKAEKLKESCLGFIKSN 311
                 578888999*************9998865 PP

>> PF07707.10  BTB And C-terminal Kelch
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.69   4.7e+03       7      25 ..     259     277 ..     256     281 .. 0.72
   2 ?   10.4   0.0   5.7e-05      0.39       7      45 ..     291     329 ..     288     340 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 0.69
  PF07707.10   7 fAeaysleeLkeaakkfil 25 
                  A  y+++ L+  ++  ++
  MMETSP1325-20131115|8807_1 259 AATEYQCTALARICEVKLC 277
                 5788999999888775555 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 5.7e-05
  PF07707.10   7 fAeaysleeLkeaakkfilknfeevvkseeFleLsleel 45 
                 +A+  + e+Lke++  fi++n  +v+++  F +++   +
  MMETSP1325-20131115|8807_1 291 LADKTKAEKLKESCLGFIKSNEVAVMQTGGFQQMKSAGV 329
                 79999****************************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 1744.55
//
Query:       MMETSP1325-20131115|8812_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 454.31
//
Query:       MMETSP1325-20131115|8813_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.054   12.9   0.0       0.06   12.8   0.0    1.0  1  PF09353.5 Domain of unknown function (DUF1995)


Domain annotation for each model (and alignments):
>> PF09353.5  Domain of unknown function (DUF1995)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.4e-06      0.06      33      90 ..       3      70 ..       1      74 [. 0.91

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.4e-06
   PF09353.5 33 fpglik........kllplalellqkLaeag.rkllvvfpdageaalakrdl.gdlgfkllslkdrke 90
                 p+l++        +ll+++++++++La +g r+ ++v+  +g + +   +l   +  k+l+++d++ 
  MMETSP1325-20131115|8813_1  3 TPELNPsmdsyrvgTLLEMVRDIATRLACSGlRVRVCVQGPMGRGIFVGLPLsLNGVRKILEMMDWQA 70
                68997788888899*****************99999****************99999********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 343.63
//
Query:       MMETSP1325-20131115|8814_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 316.32
//
Query:       MMETSP1325-20131115|8816_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 420.59
//
Query:       MMETSP1325-20131115|8818_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.19   11.4   0.0    1.4  1  PF12812.2 PDZ-like domain


Domain annotation for each model (and alignments):
>> PF12812.2  PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.4e-05      0.19      29      76 ..      19      65 ..      15      67 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.4e-05
   PF12812.2 29 pvkgvyvseasgsfslaskekkgviitsinnkptpnLdefievlkklp 76
                + + v   +++g+  la+ +kkg++ + in+ ++   ++f   +++ +
  MMETSP1325-20131115|8818_1 19 ATNTVLSTKPGGQADLAG-VKKGWVFDAINGVQVAGDEAFEAAMAEAK 65
                567788899********9.****************9999999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 996.88
//
Query:       MMETSP1325-20131115|8811_1  [L=557]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.5e-130  435.9   8.4   1.7e-130  435.7   5.8    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
      0.013   14.8   0.0       0.76    9.2   0.0    2.6  2  PF08815.5  Nuclear receptor coactivator
       0.02   14.2   0.0      0.064   12.6   0.0    1.8  1  PF05489.7  Phage Tail Protein X


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  435.7   5.8  3.8e-134  1.7e-130       1     488 []      49     544 ..      49     544 .. 0.97

  Alignments for each domain:
  == domain 1    score: 435.7 bits;  conditional E-value: 3.8e-134
  PF00118.19   1 ladivkttLGPkGrnkmlvnkggkivitndgatilkelelqhpvakllveaaksqdeevGDGtttaviLageLleeaeklikagihpteiirglelaleialkaLekisislsvdk..reellkvartslnsklssresellsklvvdAv.kiieeea.....eldvgnigvikieggsledselieGvvldkgylspdmpkrlenpkillldcsleteke.tktkvvlkdaeelekleeaeekqllpllekivesgvnlviiakgiddealhfLakngilalrrvkkedlerlakltgatavsrlesleeedlGkakkveeeeigedkttliegestlsgkvatillrgateveldeleraiedalravkaalkdegvvpGGGaaelelskkLreeakslsgkeqlgieifakAleaipktLaeNagldpkevlaklkaahkkge.nlgidaetge.iidlveagilDplkvkrsalksavevasliLtidqiikaks 488
                 +a+iv++++GP+G+nk++vn+  ki++++d+at++kele+qhp+ak+l  aa+ qd e+GD t+ +v++ageLl+ +e+l+k+g+h +ei+ g++ a++++l+ L  +++    d+  r  l++ ++++l sk + +e e l+klv++A+  ++++ +     +++ + ++v+k+ gg+++ se+++G+v+++   ++   k+++n+k+ ++ c +e+e++ t ++v +++a+++++++++eek l++++ +i+ +g n+vi+  +i+++alhf  k+++++++  +k+dl+rl++++gata+ r++  ++e++G + k++++e+g+ k+t++e+ + ++++vati+lr + +  +++lera++d+++ +k+++k + +vpG+Ga+e+el++ Lr+ea  +++ +q++i++f +A+e++p++LaeN+g d+++++++l  ah++g+ n+g+ +e    + d ++ ++lD +++k sal+ av++a+++L++dqii++k+
  MMETSP1325-20131115|8811_1  49 IAQIVSSSMGPNGMNKLVVNHLSKIIVSSDCATLIKELEVQHPAAKMLALAAEMQDQEYGDATNLCVTFAGELLKLSEELLKSGVHQSEIVAGFKVAFDKTLEVLPTLACHTVEDPrdRAALENAVTSALMSKQYGHE-EVLAKLVTEAClTVMPNADtgrrpSVNSDSVRVVKLMGGNVNLSEVVHGMVFPRAAETT--IKSVTNAKVTVFGCGIESESTeTSGTVLIRNADDMLNYNKSEEKALEEVIAAIAATGTNVVISGGSISEMALHFIEKYKMMCVKIQSKWDLRRLCATVGATALVRIGAATPEEMGACAKIYVKEFGNRKVTVFEQSGAEDTQVATIVLRSSVSAQINDLERACDDGVNCIKNLCKVPQFVPGAGATEMELATVLRAEADATDTLDQYAIRAFGEAFEVVPRILAENSGQDATALISQLYTAHQNGDkNAGVEIEPPMgVKDAAAGNVLDLMTTKESALRLAVDAAITVLRVDQIIMSKP 544
                 79******************999**********************************************************************************88866665554589**************99999.***********7777777799999999999*************************9998..7999*****************9*****************************************************************************************99*********************87779*******************************************************************************************************88888******98885779***********************************986 PP

>> PF08815.5  Nuclear receptor coactivator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.02        93      10      41 ..      25      56 ..      23      63 .. 0.84
   2 ?    9.2   0.0   0.00017      0.76       2      28 ..     472     498 ..     471     513 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.02
   PF08815.5 10 LdQLvslLkdtdesgLeEiDraLGIpeLVgQs 41
                L Q +   ++ de+ L+ i  a GI ++V+ s
  MMETSP1325-20131115|8811_1 25 LKQGHKSIEGLDEAVLKNIEAAKGIAQIVSSS 56
                66777778899******************755 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00017
   PF08815.5   2 gqsDEkALLdQLvslLkdtdesgLeEi 28 
                 + +D  AL++QL+++ ++ d+ +  Ei
  MMETSP1325-20131115|8811_1 472 SGQDATALISQLYTAHQNGDKNAGVEI 498
                 578999*********999998766666 PP

>> PF05489.7  Phage Tail Protein X
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.4e-05     0.064       7      35 ..     445     473 ..     439     479 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.4e-05
   PF05489.7   7 qgDtlDalcwryYGrtlgvveavlaANpg 35 
                   DtlD  ++r +G++  vv ++la N g
  MMETSP1325-20131115|8811_1 445 ATDTLDQYAIRAFGEAFEVVPRILAENSG 473
                 57************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       430  (0.0314511); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.91u 0.33s 00:00:01.24 Elapsed: 00:00:00.54
# Mc/sec: 2471.80
//
Query:       MMETSP1325-20131115|8820_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.31s 00:00:00.65 Elapsed: 00:00:00.44
# Mc/sec: 473.83
//
Query:       MMETSP1325-20131115|8819_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.083   12.5   0.0       0.18   11.5   0.0    1.6  1  PF00313.17 'Cold-shock' DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00313.17  'Cold-shock' DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.3e-05      0.18       2      36 ..      75     107 ..      74     117 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.3e-05
                 ---B----S..----B--------BB--TTT---- CS
  PF00313.17   2 tGtVkwfnakkgfGFItredgekdvFvHqsaiqkd 36 
                 tG V +++    fG+  ++dg+ ++F+H s++  d
  MMETSP1325-20131115|8819_1  75 TGEVSTVEY--TFGYKRCADGKPRIFLHHSSVPYD 107
                 788888888..9******************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 609.98
//
Query:       MMETSP1325-20131115|8822_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-23   80.8   0.0    6.6e-23   80.2   0.0    1.2  1  PF00085.15 Thioredoxin
      2e-08   34.2   0.3    8.5e-08   32.2   0.2    2.0  1  PF13098.1  Thioredoxin-like domain
    2.3e-06   27.5   0.2     0.0026   17.7   0.2    2.3  1  PF13905.1  Thioredoxin-like
    2.7e-05   22.9   0.0    3.3e-05   22.7   0.0    1.0  1  PF01216.12 Calsequestrin
      4e-05   23.3   0.0      0.041   13.5   0.0    2.3  2  PF13848.1  Thioredoxin-like domain
    7.1e-05   22.6   0.0    0.00012   21.9   0.0    1.4  1  PF13899.1  Thioredoxin-like
  ------ inclusion threshold ------
      0.031   13.8   0.5       0.32   10.5   0.3    2.2  1  PF00578.16 AhpC/TSA family
      0.057   13.1   0.0        0.1   12.3   0.0    1.5  1  PF13192.1  Thioredoxin domain
      0.079   12.3   0.1        9.3    5.6   0.1    2.3  2  PF13743.1  Thioredoxin
       0.13   12.0   0.0       0.24   11.1   0.0    1.5  1  PF07449.6  Hydrogenase-1 expression protein HyaE


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   0.0   4.9e-26   6.6e-23      21     100 ..       3      91 ..       1      94 [. 0.90

  Alignments for each domain:
  == domain 1    score: 80.2 bits;  conditional E-value: 4.9e-26
                 EEEEEE-TT---HHHHHHHHHHHHHHTT-.......TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEE.EE---..-HHHHHHH CS
  PF00085.15  21 vlvefyApwCGhCkalaPeyeklaeelke.......kvvlakvdvdenkdlaseygvegiPtlklfkngkkve.evega.rekeklvaf 100
                 ++v fyApwC hCk+l+Pe+ k+a+++++        +++akv++++n+dla++ygv+g+Ptl +fk+g+k   + e a r+++++ ++
  MMETSP1325-20131115|8822_1   3 LFVMFYAPWCDHCKELKPEFSKAAKKVAKsqdegdmPIMFAKVNAEANSDLAKKYGVQGYPTLRFFKHGEKLPvNGEAAgRTADEISEW 91 
                 6799***********************999999*999**********************************986444445899999877 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.2   6.2e-11   8.5e-08       7      96 ..       2      74 ..       1      92 [. 0.79

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 6.2e-11
   PF13098.1  7 rvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklv 96
                +++v+f +p+C  Ck l++e  k ++   + +d+  ++++ ++ ++                  +++l++k+gv+g Pt+ f++  G+++
  MMETSP1325-20131115|8822_1  2 HLFVMFYAPWCDHCKELKPEFSKAAKKVAKSQDEGDMPIMFAKVNA----------------EANSDLAKKYGVQGYPTLRFFK-HGEKL 74
                6799******************988877777777777766666443................24579****************6.78765 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.2   1.9e-06    0.0026       5      35 ..       4      34 ..       2      71 .. 0.79

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.9e-06
   PF13905.1  5 llyfaaswcppckaftpelkelyeklkaskd 35
                +++f+a+wc++ck+  pe  +  +k+ +s+d
  MMETSP1325-20131115|8822_1  4 FVMFYAPWCDHCKELKPEFSKAAKKVAKSQD 34
                79***********************998443 PP

>> PF01216.12  Calsequestrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   2.4e-08   3.3e-05      88     200 ..      37     155 ..      20     168 .. 0.79

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 2.4e-08
                 CT----EEEETTTTHHHHHC--------EEEE----EEEE-----...HHHHHHHHHCCSS-S..EEEE-SHHHHHHH.HH--SS..-EEE---S-TTSHHHHHHHHHHHCTTTTSEEEEE CS
  PF01216.12  88 dkgvgfglvdsekdaavakklgldeedslyvlkgdevieydgefs...advlveflldvledp..veliegkrelqaf.eniede..ikligyfksedseyykafedaaeefhpyikffat 200
                 d  + f+ v++e ++ +akk g++   +l  +k  e +  +ge +   ad + e+ l + + p  v+ i +   +q f e++e    + +ig f   d e    f d ae+ +  ++f  t
  MMETSP1325-20131115|8822_1  37 DMPIMFAKVNAEANSDLAKKYGVQGYPTLRFFKHGEKLPVNGEAAgrtADEISEWALRIAKAPdrVKEITSGVGIQKFiEEMESSttVGVIGTFE--DKEAADLFIDVAEKCRYPVRFGWT 155
                 556889*************************************85444999******99885533778899999998857777651145677775..556677899999998877777655 PP

>> PF13848.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0     3e-05     0.041      22      70 ..      37      91 ..       4      96 .. 0.47
   2 !    7.6   0.0    0.0019       2.7       5      41 ..     132     168 ..     130     172 .] 0.88

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3e-05
                --B-----.....-HHHHHHTT---.--EEEEETTTTEEEEE-HH..T--HHHHHHH CS
   PF13848.1 22 dvtfgvts.....ekevakklgike.pkvllfrkfdekrvkydge..kltvddlkkf 70
                d+  ++ +     ++++akk+g++  p++ +f+++++   +++ge    t+d+++++
  MMETSP1325-20131115|8822_1 37 DMPIMFAKvnaeaNSDLAKKYGVQGyPTLRFFKHGEK--LPVNGEaaGRTADEISEW 91
                2222222222333444555555555555555555333..344444444455555555 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0019
                 TSTHHHHHHHHHHH--.--B------HHHHHHTT--- CS
   PF13848.1   5 ddelkeiFekaakelkgdvtfgvtsekevakklgike 41 
                 d+e+++ F  +a++ +  v+fg t+++ ++k+lg++e
  MMETSP1325-20131115|8822_1 132 DKEAADLFIDVAEKCRYPVRFGWTTKPYAWKHLGLEE 168
                 56899***********88**************99987 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   8.6e-08   0.00012      20      81 ..       3      69 ..       1      70 [. 0.76

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 8.6e-08
   PF13899.1 20 llvifgadwcpdCqaldrdvlsd.eevkaala.ekfvllrvdv.terdanleldr....qgvPvvvfld 81
                l+v+f+a wc +C+ l+ ++ +  + v++  + +++ ++++ v  e +   +l++    qg+P++ f+ 
  MMETSP1325-20131115|8822_1  3 LFVMFYAPWCDHCKELKPEFSKAaKKVAKSQDeGDMPIMFAKVnAEAN--SDLAKkygvQGYPTLRFFK 69
                89*****************87665777776666799999999943344..44444335788****9996 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   0.00024      0.32      29      57 ..       4      31 ..       2      76 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00024
  PF00578.16 29 vLffypkdfcpvCttelpalaelyeefkk 57
                 ++fy+  +c +C++  p++++++++ +k
  MMETSP1325-20131115|8822_1  4 FVMFYAP-WCDHCKELKPEFSKAAKKVAK 31
                689****.***************999876 PP

>> PF13192.1  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.5e-05       0.1       7      53 ..       9      65 ..       2      91 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 7.5e-05
   PF13192.1  7 gpgCakCp....kleeavkeaaeelg.ika....evekvtdfeei.ekygVmsvPal 53
                 p C +C+    ++ +a+k++a+ ++  ++      ++++ ++++ +kygV+  P+l
  MMETSP1325-20131115|8822_1  9 APWCDHCKelkpEFSKAAKKVAKSQDeGDMpimfAKVNAEANSDLaKKYGVQGYPTL 65
                566*****88888999999999999668887765444568899999*********98 PP

>> PF13743.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1    0.0068       9.3       2      26 ..       6      30 ..       5      35 .. 0.88
   2 ?    4.5   0.0     0.015        21     124     156 ..      38      70 ..      32      81 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0068
   PF13743.1  2 lFidPlcseCwelekelkklkeeyg 26
                +F  P+c++C el++e +k  ++  
  MMETSP1325-20131115|8822_1  6 MFYAPWCDHCKELKPEFSKAAKKVA 30
                7999**************9998765 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.015
   PF13743.1 124 lesklakkafqsDlkiaremevtevPtlvffne 156
                 +   +ak + ++   +a+ ++v+  Ptl ff++
  MMETSP1325-20131115|8822_1  38 MPIMFAKVNAEANSDLAKKYGVQGYPTLRFFKH 70 
                 5556677777778899***************84 PP

>> PF07449.6  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00018      0.24      64      95 ..      43      74 ..      19      79 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00018
   PF07449.6 64 avvareqeealaerfgvlrlPsllflrdgeyl 95
                a v++e ++ la+++gv+ +P+l f+++ge l
  MMETSP1325-20131115|8822_1 43 AKVNAEANSDLAKKYGVQGYPTLRFFKHGEKL 74
                446689999******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 808.18
//
Query:       MMETSP1325-20131115|8825_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-07   30.9   1.5    1.8e-07   30.7   1.0    1.0  1  PF01925.14 Sulfite exporter TauE/SafE


Domain annotation for each model (and alignments):
>> PF01925.14  Sulfite exporter TauE/SafE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   1.0   1.3e-11   1.8e-07      43     104 ..       3      64 ..       2      67 .] 0.93

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 1.3e-11
  PF01925.14  43 avlvtslvgalahrrkgnvdwrlllplllgallGallGallllllpskllkllfgvllllla 104
                 a+++ s+vg+++h + gnv  r++ pl++g+++G+++ a +  +++++ l+ +f ++++ll+
  MMETSP1325-20131115|8825_1   3 AMVPISMVGVATHAKLGNVVPRIAGPLAVGTAVGSFAMAQVGVQISEESLHYFFCAVMVLLG 64 
                 578899*********9***9**************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|8826_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 420.59
//
Query:       MMETSP1325-20131115|8823_1  [L=428]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-33  114.2   0.0    6.1e-33  113.8   0.0    1.2  1  PF00668.15 Condensation domain


Domain annotation for each model (and alignments):
>> PF00668.15  Condensation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.8   0.0   4.5e-37   6.1e-33       4     299 ..      77     387 ..      74     389 .. 0.82

  Alignments for each domain:
  == domain 1    score: 113.8 bits;  conditional E-value: 4.5e-37
                 EEE--TTT---HHHHHH-----TTE..EEEEEEEE----HHHHHHHHHHHHHH-GGGGEEEE-SS-SS-EEEEES-----EEEEE-TT---HHHHHHHHHHHHHH----TTTS-SEEEEEEEE.....ET...T.EEEEEEEEEGGG--------HHHHHHHHHHHHH..TT----------THHHHHH..HHTS-.HHHHHHHHHHHH-----.......--TTTTT---S-----EEEEEE---HHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHT---EEE-EEE----T...T----TT------EEEEEEE- CS
  PF00668.15   4 eyplspaQerllflskleaetsayn..vqavlrlegaldlerlekAlkelverhdaLRtvfeedeggepvqvvleekevelevldvlsvtaeeeeieellaedlqepfdLekgplfrvalfkt.....ee...d.rvlllfsvHHlivDgvSlrilledlaalYagle..eklpdksesykdyaeeqqe..leqserkekeaaYWkeqlsgleps......lslpkdyervplesydgsrltfslskettkllkklakaygvtlntvLlaawglvLskysgqddivvgteisgRee...pvadiertvGlFintlplrvd 299
                  +pl p+Q+ ++ + +l ++  + n  ++ v +++  +d+  +e A+++lv+rh++LR+v++ d     +q++l  +  + ++l+v s  ++++e +e++++ l+++ ++ +g l   +lf++     ++      v l f ++ li D+ Sl i+ e+l+alY+++   e l + s +y+ +a + ++  l++ +  ++e+aYW+++ s ++ +       +lp ++e++ ++++  +rl+ s+ ++ ++++ + ++++g+t+n++L +a+  vL+ +s+++++ +++ +++R+    + ad  r+vG+  +t+ +  d
  MMETSP1325-20131115|8823_1  77 PFPLLPMQK-IYAIGRLLTQEGSSNawISWVSEIT-SFDQPKFEWAMTTLVRRHPMLRAVILGDG---SRQRILPPD-DKRWTLEVES-PETAAEFKEAQEQVLSQVHEFGSGGLASSHLFDVfavskQNvgaPgTVQLTFVFDLLIADAASLSIISEELSALYHSDGnaEVLSPVSATYRNFALSKERslLSEAKLVKEEKAYWARKCSLEPDEgglpvaPQLPLRREKAGVFKV--TRLSSSIAAGDWAKVLRRCQKEGITANSLLFTAFVRVLATWSSTKHFLMNMAFFNRSGvfpDPADEGRVVGNCASTILVDCD 387
                 68*******.9999998877775541145566666.9************************8888...599999666.6667777776.4566777777777777777666666666666654111112222223799****************************99999999999******98765522677778899********99888888999999********999999..6*********9999999*****************************************99888999******9999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.47s 00:00:01.15 Elapsed: 00:00:00.60
# Mc/sec: 1709.40
//
Query:       MMETSP1325-20131115|8827_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-12   46.4   0.0    2.7e-12   46.3   0.0    1.0  1  PF00069.20 Protein kinase domain
    8.5e-05   21.6   0.0    8.9e-05   21.6   0.0    1.0  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   3.9e-16   2.7e-12     124     184 ..       1      62 [.       1      63 [] 0.96

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 3.9e-16
                 -SGGGEEEE.TT--EEE------EEE..CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHH CS
  PF00069.20 124 LKpeNiLld.kkgelkiaDFGlakkl..eksseklttlvgtreYmAPEvllkakeytkkvDvWs 184
                 LK +Ni+++ ++g+l+i D+Gl++     +++ k+ tl gt+ +mAPE ++  + y++kvD+++
  MMETSP1325-20131115|8827_1   1 LKCDNIFINgNTGDLRIGDLGLSRRKdiAENDDKNLTLAGTPAFMAPEFYK--EAYDEKVDIYA 62 
                 8********999************999999999****************99..9*********8 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.3e-08   8.9e-05     129     190 ..       1      62 [.       1      63 [] 0.88

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.3e-08
                 -SGGGEEEETTT.EEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH CS
  PF07714.12 129 LaarNvLleeek.vvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWs 190
                 L + N++++ ++   +i+D GL+r++   ++  k+ +      +mapE   ++ + +k D+++
  MMETSP1325-20131115|8827_1   1 LKCDNIFINGNTgDLRIGDLGLSRRKDIAENDDKNLTLAGTPAFMAPEFY-KEAYDEKVDIYA 62 
                 6789****987779************8888888899999999******65.5679*****996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.28u 0.45s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|8824_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.6e-24   84.2   0.1    8.2e-24   83.9   0.1    1.1  1  PF04547.7 Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.9   0.1     6e-28   8.2e-24     338     450 ..       2     108 ..       1     110 [. 0.96

  Alignments for each domain:
  == domain 1    score: 83.9 bits;  conditional E-value: 6e-28
   PF04547.7 338 apllalinniieirsdafklltelrRpvpqraesIGqWqkilellgvlavitNafliaftsdgqlqrllndlslaarlllvvvlehvvlllkyliavlipdipewvreelkre 450
                 ap++a ++  ++ir+d +kl+  ++R  p  a++IG+W  i++l ++ +vi+Na++++ft      +++++ +l +r+++++++++v++ l   ++ +ipdipe+v+ + +r 
  MMETSP1325-20131115|8824_1   2 APFMAAVSEYVQIRTDGWKLCRAFKRCQPIGAQDIGIWASIFQLTTYASVISNAGIVMFT-----GDWFPY-KLSTRIWMFILFQYVLCGLMTGLDAAIPDIPEDVEMQVERT 108
                 9***********************************************************.....678888.7889******************************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 806.94
//
Query:       MMETSP1325-20131115|8821_1  [L=376]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   9.7e-127  423.4  26.7   9.7e-127  423.4  18.5    1.3  2  PF02990.11 Endomembrane protein 70
  ------ inclusion threshold ------
       0.51    9.7   0.0       0.51    9.7   0.0    3.0  3  PF00517.12 Retroviral envelope protein


Domain annotation for each model (and alignments):
>> PF02990.11  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  423.4  18.5  1.4e-130  9.7e-127     196     519 ..       8     332 ..       3     334 .. 0.99
   2 ?   -8.7   3.6         2   1.4e+04     443     462 ..     342     361 ..     338     371 .. 0.50

  Alignments for each domain:
  == domain 1    score: 423.4 bits;  conditional E-value: 1.4e-130
  PF02990.11 196 aqihwfsiinslvivlfLsglvavillRtlkkdlaryneedeeedkqeesgwklvhgDvfreprkskllsilvgsGvqllllvlvvlvlallgflspssrgslltaaillyvllgivagYvsarlyktlkgkkwkrnliltaillpgivfvilfvlNlvlwaksssgavPfstlvvllllwflvsvPLsllGgivgfrkeale.eapvrtnqiprqiPe.qkwylktllsillaGilpfgaifielffifsslWlekiYylfGflflvfiiLvvvtaevsivltYfqLcaEdyrWwWrsflvsgstavYvflysiyyfvtklkisg 519
                  +ihw+siins+v+vl+L+ ++++il+R+lk+d++ry   +e+e+ +eesgwkl+hgDvfr+p++ +l+++lvg+G ql ++++++l+ a++gf+ p++rg++lta+i+ly+l+++++g++sarly+++kg +w +n+i+tai++pg++ vi++ +N+v+w++ s++a+P +t++++ +l++lvs+PL+++G+i g r+ a + +ap+rt+++ rq+P+  +wy++++ ++++aG+lpf+ai+iel++if+s+W +kiY+lfG+lf+ fi+L +vt+ ++++l YfqL+ Ed+rWwWrsf+++gst++++++ys++yf+ ++++ g
  MMETSP1325-20131115|8821_1   8 FEIHWLSIINSFVLVLLLTAFLTIILMRVLKNDFTRYMDVEEDEMGEEESGWKLIHGDVFRFPSNINLFAALVGAGGQLCCTTFLLLLCAITGFFRPTKRGAILTAMIVLYALTSFIGGFTSARLYRQFKGLNWVWNTIMTAIIFPGPLGVIFMWVNTVAWSRASTAALPWHTVMIIASLYMLVSFPLTIIGAIAG-RNLASDfDAPCRTKKVLRQVPTdIPWYRQPMAQMFMAGFLPFSAIYIELHYIFASVWGHKIYTLFGILFIAFIMLFIVTSFITVALIYFQLAREDHRWWWRSFFSGGSTGFFIYAYSFFYFFQRSSMDG 332
                 58**************************************************************************************************************************************************************************************************.9999999**************9779***************************************************************************************************99987 PP

  == domain 2    score: -8.7 bits;  conditional E-value: 2
  PF02990.11 443 fsslWlekiYylfGflflvf 462
                 + ++ ++ ++ + Gf+ +v 
  MMETSP1325-20131115|8821_1 342 YMAIISYAFFLMLGFVGFVS 361
                 55555555555555544433 PP

>> PF00517.12  Retroviral envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   7.4e-05      0.51     152     199 ..      11      56 ..       4      60 .. 0.84
   2 ?   -1.5   0.7      0.21   1.4e+03     155     177 ..     266     288 ..     254     299 .. 0.71
   3 ?   -0.1   0.2     0.072   4.9e+02     142     187 ..     322     370 ..     317     375 .. 0.53

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 7.4e-05
  PF00517.12 152 sWikiikigililliiivlrilvkvlrnckrvrqgysplqmellkdre 199
                  W++ii  ++l+ll+   l+i  +++r++k+  ++y +++ +++ ++e
  MMETSP1325-20131115|8821_1  11 HWLSIINSFVLVLLLTAFLTI--ILMRVLKNDFTRYMDVEEDEMGEEE 56 
                 5***************99999..7889999999999999777766655 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.21
  PF00517.12 155 kiikigililliiivlrilvkvl 177
                 ++++i++++++++++++++++v 
  MMETSP1325-20131115|8821_1 266 TLFGILFIAFIMLFIVTSFITVA 288
                 56778888888888888777765 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.072
  PF00517.12 142 aqlanwfdwtsWi......kiikigililliiivlrilvkvlrnckrvrqgy 187
                  ++++ +++  W+          ++++i  + +++  +v+ ++++  v+  y
  MMETSP1325-20131115|8821_1 322 FYFFQRSSMDGWLqssfyfG---YMAIISYAFFLMLGFVGFVSSMVFVKHIY 370
                 56777788888998885552...44444444444444444444333344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       926  (0.0677297); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.39s 00:00:01.14 Elapsed: 00:00:00.76
# Mc/sec: 1185.57
//
Query:       MMETSP1325-20131115|8828_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   13.7   6.8      0.033   13.5   4.7    1.0  1  PF10123.4  Mu-like prophage I protein
       0.53    9.5   9.5       0.66    9.2   6.6    1.1  1  PF01577.11 Potyvirus P1 protease
        1.1    7.2  34.9        1.2    7.1  24.2    1.1  1  PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
        1.6    8.3  14.9        1.7    8.3  10.3    1.2  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
          4    6.1  13.4        4.5    6.0   9.3    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        8.2    6.5  13.9         11    6.2   9.6    1.2  1  PF03234.9  Cdc37 N terminal kinase binding
        8.3    5.2   8.1        7.9    5.2   5.6    1.0  1  PF00242.12 DNA polymerase (viral) N-terminal domain


Domain annotation for each model (and alignments):
>> PF10123.4  Mu-like prophage I protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   4.7   1.7e-05     0.033     139     218 ..       3      92 ..       1     104 [. 0.68

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.7e-05
   PF10123.4 139 seqsqqeeeeenellekllkaLglaaaateea......alaalaeaalaalaalataaak..ldeqkeqlaaltakkan..evdlakyvp 218
                 ++q+qq+  +++++ ++l++ +g +++++e         +a+++  +++++a+++++ a+  + eq+++++a t+ + n   +d   + p
  MMETSP1325-20131115|8828_1   3 QQQQQQQMRQQQMQQQQLQQQMGASETEEERRmrmmqeRMAEQERIQEQRMAEMQARLAEqkAREQQQVVTAITTVQGNggGPDVPAFSP 92 
                 57888899999999***************9998876665566666666666666655443003445555555555444466666665555 PP

>> PF01577.11  Potyvirus P1 protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   6.6   0.00034      0.66       5      72 ..      13      81 ..       3      95 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00034
  PF01577.11  5 akvaerllrke..askikaekkgrvilrklsekqvkkkrekekreeeeerqflqlaaasivskitpktte 72
                 ++++++l+++  as++++e++ r++ ++++e+ + +++++++ +++  +q    +++++v++it  +++
  MMETSP1325-20131115|8828_1 13 QQMQQQQLQQQmgASETEEERRMRMMQERMAEQERIQEQRMAEMQARLAEQ-KAREQQQVVTAITTVQGN 81
                344444444446888888888888877777777777779999999999999.777788888887776655 PP

>> PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  24.2   0.00059       1.2     217     291 ..       2      76 ..       1     111 [. 0.56

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00059
   PF09606.5 217 ggqqqqqplqqqqqlqkqqnqqqqqkqlqqqqgqaqaqaqmqqqqqaqggmqpqqmagaqaqvamqqqqtqqqaq 291
                 + qqqqq+++qqq  q+q +qq++  + +  + +++ q++m +q   q++  ++ +a +  q+a++qqq    ++
  MMETSP1325-20131115|8828_1   2 QQQQQQQQMRQQQMQQQQLQQQMGASETEEERRMRMMQERMAEQERIQEQRMAEMQARLAEQKAREQQQVVTAIT 76 
                 344444455333333333333355555555555555555555555555555555555555555555554444433 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  10.3   0.00085       1.7     169     236 ..       3      70 ..       1     117 [. 0.52

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00085
                 XX....XXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXX............XXXXXXXXXXXXXXX CS
   PF03153.8 169 ksneesqeqqqpgkeiqqqqtdgasdde..kasvarrreaaasqeaeldellksqleqrikeleagklsk 236
                 ++++++q+ qq+ +++q qq+ gas++e    + ++++++a++++ + +++ + q  +r  e++a+++++
  MMETSP1325-20131115|8828_1   3 QQQQQQQMRQQQMQQQQLQQQMGASETEeeRRMRMMQERMAEQERIQEQRMAEMQ--ARLAEQKAREQQQ 70 
                 2233344444444444444444444444332333333333333333333333333..2222222222222 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   9.3    0.0023       4.5      86     154 ..       3      72 ..       1      88 [. 0.78

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0023
   PF10186.4  86 ieqkrerieelkealaqrrsdleasaqlekrraeqlaklqeeikrtksklns.lesltaekRsqlcrela 154
                  +q+++++++++ + +q+++++ as ++e+rr +  ++  +e +r +++ ++ ++  +ae+++  +++++
  MMETSP1325-20131115|8828_1   3 QQQQQQQMRQQQMQQQQLQQQMGASETEEERRMRMMQERMAEQERIQEQRMAeMQARLAEQKAREQQQVV 72 
                 4677788888888888888888899999999999999999999999988877777777777766666654 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   9.6    0.0055        11      33      96 ..       2      66 ..       1      85 [. 0.69

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0055
   PF03234.9 33 kqqaihekreqrkkeieelekelkinkkllervdkllselkee.eelssekvlkklneeadkedk 96
                +qq+  +++ q+++++++l++++  +++  er  ++++e  +e e  ++++++++ +  a+++ +
  MMETSP1325-20131115|8828_1  2 QQQQQQQQMRQQQMQQQQLQQQMGASETEEERRMRMMQERMAEqERIQEQRMAEMQARLAEQKAR 66
                58899999999999999999999999999888888888777664556666655555444433222 PP

>> PF00242.12  DNA polymerase (viral) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   5.6     0.004       7.9     233     301 ..       3      70 ..       1     117 [. 0.57

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.004
  PF00242.12 233 kersvglvvqskiqrsRlglqakqgklakeqqgrslalrarkessarrsvgvedsssrvksnrasksss 301
                 ++++ + ++q+++q++ l++q   +++++e++ r ++ r   + +  +++++++ ++r  +++a+++++
  MMETSP1325-20131115|8828_1   3 QQQQQQQMRQQQMQQQQLQQQMGASETEEERRMRMMQERMAEQERI-QEQRMAEMQARLAEQKAREQQQ 70 
                 3444455555556666555555555555555555554444433333.3333333333443333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3473  (0.254023); expected 273.4 (0.02)
Passed bias filter:                     1697  (0.124122); expected 273.4 (0.02)
Passed Vit filter:                       403  (0.0294763); expected 13.7 (0.001)
Passed Fwd filter:                        51  (0.00373025); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.98u 0.50s 00:00:01.48 Elapsed: 00:00:00.70
# Mc/sec: 448.46
//
Query:       MMETSP1325-20131115|8831_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|8830_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.6    7.5   7.3        2.9    7.4   5.1    1.2  1  PF02669.10 K+-transporting ATPase, c chain


Domain annotation for each model (and alignments):
>> PF02669.10  K+-transporting ATPase, c chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.1   0.00021       2.9      62     126 ..      27      90 ..       6      94 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00021
  PF02669.10  62 egyfhsrPsaiaeseydaaasggsnlapsnpellkaiaarvealrkenldaavsvpvdlvtasgs 126
                 + +f s  sa + s + a+as++s la +  e l       +alr++   a++  +  ++ as s
  MMETSP1325-20131115|8830_1  27 AAFFASASSALSASISAADASSASALALACAEDLCSSPSCSAALRMAA-SASTAASSSAILASLS 90 
                 678999999999999************876555555555689999998.6777777777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       648  (0.0473961); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.52
# Mc/sec: 447.01
//
Query:       MMETSP1325-20131115|8832_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.1   1.5      0.052   12.9   1.0    1.1  1  PF05605.7  Drought induced 19 protein (Di19)
       0.56    8.8  14.1       0.57    8.8   9.8    1.0  1  PF01698.11 Floricaula / Leafy protein
       0.99    9.1  13.5        1.1    8.9   9.4    1.1  1  PF09428.5  Fungal protein of unknown function (DUF2011)
        1.2    7.8  11.2        1.3    7.6   7.8    1.0  1  PF04514.7  Bluetongue virus non-structural protein NS2
        1.7    6.9   4.7        1.9    6.7   3.2    1.0  1  PF02030.10 Hypothetical lipoprotein (MG045 family)
        2.7    8.1  11.1        2.9    7.9   7.7    1.0  1  PF11445.3  Protein of unknown function (DUF2894)
        3.3    5.8  20.1        3.6    5.7  13.9    1.0  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
        3.4    7.1   8.1        4.1    6.8   5.6    1.1  1  PF08374.6  Protocadherin
        5.2    7.1   9.0          2    8.4   4.7    1.4  1  PF09919.4  Uncharacterized conserved protein (DUF2149)
        7.3    6.9   9.6        8.8    6.6   6.6    1.2  1  PF13882.1  C-terminal domain of Fibronectin type III
        8.6    6.1  14.0         10    5.9   9.7    1.2  1  PF11208.3  Protein of unknown function (DUF2992)
        9.3    5.9  10.1        9.8    5.8   7.0    1.1  1  PF06459.7  Ryanodine Receptor TM 4-6
        9.4    3.2  15.7         10    3.1  10.9    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
        9.6    6.7  13.8         57    4.2   9.6    2.1  1  PF12752.2  SUZ domain
        9.9    5.1  10.7         11    5.0   7.4    1.1  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)


Domain annotation for each model (and alignments):
>> PF05605.7  Drought induced 19 protein (Di19)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.0   5.7e-05     0.052     123     180 ..      14      71 ..       3      78 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.7e-05
   PF05605.7 123 ggsssvvsssnasdsaaDpLLSsfilslpsadkektskselsaeesaskksedqkksk 180
                 gg ++++ss++ ++++aD  L  ++     ++++k+++++ +++++++k+++++++  
  MMETSP1325-20131115|8832_1  14 GGRQRRISSKQRKAASADDNLGDLLAAQQESETKKKQQQKKQQKKQKQKSVSERDEVD 71 
                 6778889999999999999999999888888888777777777776666666665544 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   9.8   0.00063      0.57     142     221 ..       7      83 ..       1      88 [] 0.39

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00063
  PF01698.11 142 dalsqeglseepvqeeke.aagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsg 221
                 +a   eg  ++++ ++k+ +a+s++ +l   +l+aa+ ++se++kk+++kk+qk++k+k+ +se+de +++ ++  +eg+g
  MMETSP1325-20131115|8832_1   7 QAQKAEGGGRQRRISSKQrKAASADDNL--GDLLAAQ-QESETKKKQQQKKQQKKQKQKS-VSERDEVDDDGKEGGGEGEG 83 
                 4444555444444443332555555552..3333333.3344444444443444444444.33333333222222333332 PP

>> PF09428.5  Fungal protein of unknown function (DUF2011)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   9.4    0.0012       1.1      77     123 ..       7      64 ..       1      70 [. 0.54

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0012
   PF09428.5  77 klkeeekkkkkkrpGKKrRialrkr...........akrtkeeaekekrkrknrekkl 123
                 ++++ e   +++r + K+R a  +            + +tk++++++k+++k+++k +
  MMETSP1325-20131115|8832_1   7 QAQKAEGGGRQRRISSKQRKAASADdnlgdllaaqqESETKKKQQQKKQQKKQKQKSV 64 
                 2233455677778888888877777898888754433333444444444444444444 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.8    0.0015       1.3     205     270 ..      19      82 ..       2      87 .. 0.48

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0015
   PF04514.7 205 petskqekeeerreavekrleerveklkldleekredlkkeqeeeekvetesddedeegedse.eee 270
                    skq k +++ +++   l++++e+   ++++k+++ k+++++++k   e+d+ d++g++ + e+e
  MMETSP1325-20131115|8832_1  19 RISSKQRKAASADDNLGDLLAAQQES---ETKKKQQQKKQQKKQKQKSVSERDEVDDDGKEGGgEGE 82 
                 23345555666666777777777665...33344444444444444444455555555555443444 PP

>> PF02030.10  Hypothetical lipoprotein (MG045 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   3.2    0.0021       1.9     381     423 ..      30      72 ..      19      77 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0021
  PF02030.10 381 adentGivgkkkkeadlkrqkkveifeedtkyktekerneiyd 423
                 ad+n G +   ++e+++k++++++ +++++k+k+  er+e++d
  MMETSP1325-20131115|8832_1  30 ADDNLGDLLAAQQESETKKKQQQKKQQKKQKQKSVSERDEVDD 72 
                 59999*999**********9999999999999**99*999887 PP

>> PF11445.3  Protein of unknown function (DUF2894)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   7.7    0.0032       2.9      55     123 ..       3      70 ..       1      76 [. 0.63

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0032
   PF11445.3  55 raekaadaaeaalsttttslaaaseaepargplaalldqiasrerpeasateearaapsestasskaal 123
                 +a+++a++ae    ++ +  +++ +a++a+ +l++ll+  ++ e+++++ ++++++++++++ s+++++
  MMETSP1325-20131115|8832_1   3 QAQAQAQKAEGG-GRQRRISSKQRKAASADDNLGDLLAAQQESETKKKQQQKKQQKKQKQKSVSERDEV 70 
                 444444444433.4677778899999************9996665555555555555455555555544 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  13.9     0.004       3.6     199     278 ..       6      82 ..       1      87 [. 0.62

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.004
                 XXX.XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXX.XXXXXX CS
   PF05793.7 199 eeekkkgggGrsk..dLkikdkegddeedsdesdkgdededeekkkkKkkkkaknkkkldDdkkkkrggdddadeydsddGd 278
                  + +k +ggGr++    k ++ ++ d++ +d   +++e e ++k+++Kk++k + +k+      ++ ++ddd +e    +G+
  MMETSP1325-20131115|8832_1   6 AQAQKAEGGGRQRriSSKQRKAASADDNLGDLLAAQQESETKKKQQQKKQQKKQKQKS----VSERDEVDDDGKE-GGGEGE 82 
                 4556788999999556688888999999999999999999999888885543222222....2223344444444.333333 PP

>> PF08374.6  Protocadherin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.6    0.0045       4.1      63     111 ..      18      65 ..      15      82 .. 0.57

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0045
   PF08374.6  63 crq.aerkkgyqagkkeeedfvsPkqedkqkkkkkkkkkksdkslllniv 111
                 +r  ++++k++ a+ +   d+++ +qe  +kkk+++kk++ +++   ++ 
  MMETSP1325-20131115|8832_1  18 RRIsSKQRKAASADDN-LGDLLAAQQESETKKKQQQKKQQKKQK-QKSVS 65 
                 4430344444444444.89*****99999888876666333322.23333 PP

>> PF09919.4  Uncharacterized conserved protein (DUF2149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.7    0.0022         2      27      75 ..      33      83 ..      26      87 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0022
   PF09919.4 27 nltevlskedvtivknpgkaemeiievkkgkevkelketeek...segeGer 75
                nl ++l++++  ++k++++++++  + +k+k+v+e  e +++   ++geGe 
  MMETSP1325-20131115|8832_1 33 NLGDLLAAQQESETKKKQQQKKQQKK-QKQKSVSERDEVDDDgkeGGGEGEG 83
                66778845555555555555555555.6778888888887775445555543 PP

>> PF13882.1  C-terminal domain of Fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.6    0.0097       8.8      37      96 ..      19      75 ..       5      84 .. 0.56

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0097
   PF13882.1 37 svkekedakldpeeqpkkd.eefeeysreedekelkresqssedeekkkesseDsldeygd 96
                +++ k+ + +  ++    + + + ++++e + k++++++++++++++k+ s++D +d+ g 
  MMETSP1325-20131115|8832_1 19 RISSKQRKAASADD----NlGDLLAAQQESETKKKQQQKKQQKKQKQKSVSERDEVDDDGK 75
                33333333333322....2445555555555555555666666667777788888888774 PP

>> PF11208.3  Protein of unknown function (DUF2992)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   9.7     0.011        10      62     116 ..       8      63 ..       1      75 [. 0.64

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.011
   PF11208.3  62 ekkknpKrlqRevkkevkk.kkvstkAqealklelekkkkekkkkskekkeeeker 116
                  +k +    qR ++ +++k +++  +  + l +++e++ k+k++++k++k+++++ 
  MMETSP1325-20131115|8832_1   8 AQKAEGGGRQRRISSKQRKaASADDNLGDLLAAQQESETKKKQQQKKQQKKQKQKS 63 
                 44555555678887666652555666667777777777777777777777766654 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   7.0     0.011       9.8      59     100 ..      25      66 ..       1      85 [. 0.35

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.011
   PF06459.7  59 r..hdaepgLgdvsevepeepptpeeaaaekkelkeeeeepkse 100
                 r   +a++ Lgd+    ++e++t+++++++k+ +k++++++ se
  MMETSP1325-20131115|8832_1  25 RkaASADDNLGDLLAA-QQESETKKKQQQKKQ-QKKQKQKSVSE 66 
                 0123333333333321.122222222222111.22222222222 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1  10.9     0.011        10     627     689 ..       3      66 ..       1      75 [. 0.80

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.011
   PF12128.3 627 eeqlkqlnaeleeakravaeakqalkqarlelqrlk.neqqslkdklekalaerkqqaeeqlqk 689
                  +q+++ +ae + ++r ++ +++++  a+++l+ l   +q+s+ +k++++ +++k+q+++++ +
  MMETSP1325-20131115|8832_1   3 QAQAQAQKAEGGGRQRRISSKQRKAASADDNLGDLLaAQQESETKKKQQQKKQQKKQKQKSVSE 66 
                 6788888899999*******************98751566667777777778888888888865 PP

>> PF12752.2  SUZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   9.6     0.062        57      18      45 ..      31      69 ..       2      70 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.062
   PF12752.2 18 s...........ergssgssagakgakdrkaksleERea 45
                +           e++++++++ +k++k++k+ks+ ER +
  MMETSP1325-20131115|8832_1 31 DdnlgdllaaqqESETKKKQQQKKQQKKQKQKSVSERDE 69
                23466777777777788999999**************87 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   7.4     0.012        11     249     298 ..      22      66 ..       2      74 .. 0.44

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.012
                 XXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX---- CS
   PF09468.5 249 dlskkreaeedaeaaesraekkrkkeeeekkkkakeskgvkalkkvnasG 298
                 ++++k+++   a++++        ++e+e kkk++++k++k++k++  s 
  MMETSP1325-20131115|8832_1  22 SKQRKAAS---ADDNLGDL--LAAQQESETKKKQQQKKQQKKQKQKSVSE 66 
                 22222222...22222222..22333333344444455555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2788  (0.20392); expected 273.4 (0.02)
Passed bias filter:                     1510  (0.110445); expected 273.4 (0.02)
Passed Vit filter:                       271  (0.0198215); expected 13.7 (0.001)
Passed Fwd filter:                        39  (0.00285255); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.66u 0.55s 00:00:01.21 Elapsed: 00:00:00.59
# Mc/sec: 357.42
//
Query:       MMETSP1325-20131115|8836_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.32s 00:00:00.62 Elapsed: 00:00:00.47
# Mc/sec: 229.44
//
Query:       MMETSP1325-20131115|8834_1  [L=353]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       464  (0.033938); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.40s 00:00:01.03 Elapsed: 00:00:00.55
# Mc/sec: 1538.03
//
Query:       MMETSP1325-20131115|8833_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.72
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|8837_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00019   20.4   0.1    0.00037   19.5   0.1    1.5  1  PF00036.27 EF hand
  ------ inclusion threshold ------
      0.026   14.5   0.1      0.044   13.8   0.1    1.5  1  PF13499.1  EF-hand domain pair
      0.084   12.3   0.3       0.14   11.6   0.2    1.3  1  PF13833.1  EF-hand domain pair
        1.4    7.4   8.5        1.7    7.2   5.9    1.2  1  PF14456.1  Alpha-helical domain 2
        1.7    7.2  14.4        1.7    7.2  10.0    1.0  1  PF10310.4  Protein of unknown function (DUF2413)
        1.9    7.7  17.0        2.4    7.4  11.8    1.1  1  PF14153.1  Spore coat protein CotO
        2.9    6.0   7.3        3.2    5.8   5.0    1.1  1  PF05872.7  Bacterial protein of unknown function (DUF853)
        3.9    7.1  16.1        4.5    6.9  11.2    1.1  1  PF06459.7  Ryanodine Receptor TM 4-6
        8.8    5.5  17.8         12    5.1  12.3    1.2  1  PF07423.6  Protein of unknown function (DUF1510)


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   2.4e-07   0.00037       1      28 [.      12      39 ..      12      40 .. 0.93

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 2.4e-07
                HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkk 28
                e+++a++++D Dg GkI+++ f++++k+
  MMETSP1325-20131115|8837_1 12 EMENAMNKLDPDGEGKITLQAFMTWFKE 39
                6899********************9985 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   2.9e-05     0.044       8      28 ..      19      39 ..       5      68 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 2.9e-05
   PF13499.1  8 llDkdgdgyldkeeLlrllkh 28
                +lD dg g+++ + ++ ++k 
  MMETSP1325-20131115|8837_1 19 KLDPDGEGKITLQAFMTWFKE 39
                456666666666666666655 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   9.1e-05      0.14      19      48 ..       6      34 ..       2      39 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.1e-05
   PF13833.1 19 lkglseeevdilfrefDtdgdGkisfeEFc 48
                l+ +  +e++  ++++D dg Gki++  F+
  MMETSP1325-20131115|8837_1  6 LD-MDVDEMENAMNKLDPDGEGKITLQAFM 34
                55.8899*****************987776 PP

>> PF14456.1  Alpha-helical domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.9    0.0011       1.7     133     214 ..      32     111 ..      13     114 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0011
   PF14456.1 133 syiyWdged....DeeealevleeedededeatieealdervreaLapddgdahllklapewarkpprvlstaqveraarraekva 214
                 +++ W  ed     +e+a+e+le+e  +  ea+++ea+ e+      +d+g+a+  k a+++a   + + ++  +e a+++++k++
  MMETSP1325-20131115|8837_1  32 AFMTWFKEDkeerEDEAAMEFLENEAAE--EAARAEAEAEAYA---NSDEGKAEK-KKADAKAGLEKSKAKREAREKAKEEDGKKK 111
                 5666666666878888999999995544..6777777777333...478888774.445666777777777777777777777665 PP

>> PF10310.4  Protein of unknown function (DUF2413)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  10.0    0.0011       1.7      24      96 ..      39     110 ..      10     115 .] 0.58

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0011
   PF10310.4  24 skkstkkdediLefLdeleksekakkkkkaeeaekaetprvekkkskkkesekaskeekeakprkseeseess 96 
                 + k++ +de  +efL++ +++e+a ++ +ae  ++ ++ + ekkk+++k   ++sk ++ea  +k++e+  ++
  MMETSP1325-20131115|8837_1  39 EDKEEREDEAAMEFLENEAAEEAARAEAEAEAYANSDEGKAEKKKADAKAGLEKSKAKREAR-EKAKEEDGKK 110
                 3467888999**********988888776665555555555444444444332222222221.1222221111 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4  11.8    0.0016       2.4      22     113 ..      25     111 ..      21     115 .] 0.53

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0016
   PF14153.1  22 ekkakmQktfikkkkkkkeeekensnekkkekeeeqkeekaeveseeeaeeaesedeqesseqeeiaqeveeeeeeeeekqeevekekeaek 113
                 e k+++Q  +++ k++k+e e+e++ e       e++++++++ +e eae+ +++de ++++++  a+   e+ ++++e+ e++++e  ++k
  MMETSP1325-20131115|8837_1  25 EGKITLQAFMTWFKEDKEEREDEAAMEF-----LENEAAEEAARAEAEAEAYANSDEGKAEKKKADAKAGLEKSKAKREAREKAKEEDGKKK 111
                 5689999999999999997777777653.....34444444444555555555555555554444443333333333333333333333333 PP

>> PF05872.7  Bacterial protein of unknown function (DUF853)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   5.0    0.0021       3.2     408     471 ..      42     103 ..      14     114 .. 0.63

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0021
   PF05872.7 408 eeidresayevLakkvaeaaeaaeqaaaeeekeeesgllgkledtalgakakkaeeraskretv 471
                 ee + e+a e L++++ae+a+ ae++a++ ++++e ++++k++d ++g +++k   +++ re+ 
  MMETSP1325-20131115|8837_1  42 EEREDEAAMEFLENEAAEEAARAEAEAEAYANSDEGKAEKKKADAKAGLEKSK--AKREAREKA 103
                 4556789*******999988877776666555444444555555555544333..333333332 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  11.2     0.003       4.5      31     132 ..      16     112 ..       4     115 .] 0.63

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.003
   PF06459.7  31 eleetgeteeeevgsdafgldvkkeggkrhdaepgLgdvsevepeepptpeeaaaekkelkeeeeepkseaekadledgekeekaeeeseekpeeakaakkk 132
                 ++++  + +e +++ +af    k++++    ++++  ++ e+e+ e+ + +ea a   e+ ++ +e k e +kad ++g  + ka+ e  ek++e+  +kkk
  MMETSP1325-20131115|8837_1  16 AMNKLDPDGEGKITLQAFMTWFKEDKE--EREDEAAMEFLENEAAEEAARAEAEA---EAYANSDEGKAEKKKADAKAGLEKSKAKREAREKAKEEDGKKKK 112
                 444446677888888888888755544..44444445788888888888776666...44578888888888888888877555655554444444444433 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  12.3    0.0077        12      35     118 ..      33     111 ..      26     115 .] 0.26

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0077
   PF07423.6  35 lvgnskskkasad........eeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkeeeseedeketeekee 118
                 ++++ k++k+ ++        e       +e ++e+ + + e++  a++++ +   e++k d +   e    k+k++ e+ e++ke+++k++
  MMETSP1325-20131115|8837_1  33 FMTWFKEDKEEREdeaameflE-------NEAAEEAARAEAEAEAYANSDEGKA--EKKKADAKAGLE----KSKAKREAREKAKEEDGKKK 111
                 4444444443333122233332.......2222222222222222222222222..111111111111....11111122222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1582  (0.115711); expected 273.4 (0.02)
Passed bias filter:                      636  (0.0465184); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.43s 00:00:00.96 Elapsed: 00:00:00.60
# Mc/sec: 459.30
//
Query:       MMETSP1325-20131115|8838_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 572.19
//
Query:       MMETSP1325-20131115|8840_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-21   75.1  19.8    1.3e-09   37.3   0.6    2.9  4  PF12799.2  Leucine Rich repeats (2 copies)
    4.3e-10   39.0  19.4    7.3e-07   28.7   2.9    2.3  2  PF13855.1  Leucine rich repeat
    1.6e-07   30.5  19.6      0.039   13.9   0.1    5.1  5  PF13516.1  Leucine Rich repeat
    1.2e-05   24.5  16.7      0.063   13.2   0.1    4.7  5  PF00560.28 Leucine Rich Repeat
    1.7e-05   24.1  12.9       0.94    9.8   0.1    4.9  5  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   2.1   4.2e-05      0.11       4      42 ..      10      47 ..      10      49 .. 0.90
   2 !   26.4   2.2   1.2e-09   3.3e-06       2      43 ..      30      70 ..      29      71 .. 0.96
   3 !   37.3   0.6   4.8e-13   1.3e-09       2      43 ..      52      92 ..      51      93 .. 0.96
   4 !   33.3   1.1   8.2e-12   2.2e-08       1      38 [.      73     109 .]      73     109 .] 0.98

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.2e-05
   PF12799.2  4 evLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaL 42
                ++L Ls  n+ ++++ l ++++L+ L L+nN i ++ +L
  MMETSP1325-20131115|8840_1 10 TTLRLSFKNVLKIDN-LQGFNSLTKLCLDNNMIKEICNL 47
                58999999999****.*****************998776 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 1.2e-09
   PF12799.2  2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43
                +L++L L nN Ik++ + l  L  L+ L+Ls N is+++ L+
  MMETSP1325-20131115|8840_1 30 SLTKLCLDNNMIKEICN-LDHLVHLQWLDLSFNSISKIEGLD 70
                69***************.********************9986 PP

  == domain 3    score: 37.3 bits;  conditional E-value: 4.8e-13
   PF12799.2  2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43
                 L+ LdLs N+I+++++ l +L+nL+ L+L +N+is+++ L+
  MMETSP1325-20131115|8840_1 52 HLQWLDLSFNSISKIEG-LDRLTNLTDLSLFSNRISEVEGLE 92
                59***************.********************9986 PP

  == domain 4    score: 33.3 bits;  conditional E-value: 8.2e-12
   PF12799.2   1 tnLevLdLsnNnIkdlppelanLpnLktLnLsnNpisd 38 
                 tnL+ L+L +N+I+++++ l  +++L+ L+L nN+is+
  MMETSP1325-20131115|8840_1  73 TNLTDLSLFSNRISEVEG-LEACTQLQCLSLGNNQISS 109
                 8*****************.*****************96 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   5.1   2.9e-08   7.8e-05       4      61 .]      10      63 ..       9      63 .. 0.90
   2 !   28.7   2.9   2.7e-10   7.3e-07       2      61 .]      52     107 ..      52     107 .. 0.96

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 2.9e-08
   PF13855.1  4 keLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                ++L Ls+ +  +i+   ++g ++L++L L +n +k+i  + +++L++L++L+Ls N++
  MMETSP1325-20131115|8840_1 10 TTLRLSFKNVLKID--NLQGFNSLTKLCLDNNMIKEI--CNLDHLVHLQWLDLSFNSI 63
                58999964488998..6********************..559**************97 PP

  == domain 2    score: 28.7 bits;  conditional E-value: 2.7e-10
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 +L+ LdLs+N++++i+   + +l+nL+ L+L +n++++++   ++ +++L+ L+L +N++
  MMETSP1325-20131115|8840_1  52 HLQWLDLSFNSISKIEG--LDRLTNLTDLSLFSNRISEVE--GLEACTQLQCLSLGNNQI 107
                 79*************96..********************7..69**************97 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.28   7.8e+02       5      13 ..      10      18 ..      10      28 .. 0.70
   2 !    7.0   0.8    0.0023       6.4       2      15 ..      29      42 ..      24      47 .. 0.89
   3 !   13.9   0.1   1.4e-05     0.039       3      16 ..      52      65 ..      50      70 .. 0.84
   4 !    8.5   0.1   0.00078       2.1       1      20 [.      72      92 ..      72      93 .. 0.85
   5 !   10.5   1.2   0.00018      0.48       1      15 [.      94     108 ..      94     109 .] 0.94

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.28
   PF13516.1  5 tsLdLsnNq 13
                t+L+Ls+ +
  MMETSP1325-20131115|8840_1 10 TTLRLSFKN 18
                7999*9733 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0023
   PF13516.1  2 knLtsLdLsnNqig 15
                ++Lt L+L nN i 
  MMETSP1325-20131115|8840_1 29 NSLTKLCLDNNMIK 42
                79*********986 PP

  == domain 3    score: 13.9 bits;  conditional E-value: 1.4e-05
   PF13516.1  3 nLtsLdLsnNqigd 16
                +L++LdLs+N i++
  MMETSP1325-20131115|8840_1 52 HLQWLDLSFNSISK 65
                8***********98 PP

  == domain 4    score: 8.5 bits;  conditional E-value: 0.00078
   PF13516.1  1 lknLtsLdLsnNqigd.eGls 20
                l+nLt+L L +N i+  eGl+
  MMETSP1325-20131115|8840_1 72 LTNLTDLSLFSNRISEvEGLE 92
                79************9867765 PP

  == domain 5    score: 10.5 bits;  conditional E-value: 0.00018
   PF13516.1   1 lknLtsLdLsnNqig 15 
                 +++L+ L L+nNqi+
  MMETSP1325-20131115|8840_1  94 CTQLQCLSLGNNQIS 108
                 99************8 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.5   4.1e+03       5      11 ..      12      18 ..      10      28 .. 0.53
   2 !    8.0   0.6    0.0012       3.2       1      22 []      30      50 ..      30      50 .. 0.91
   3 !   13.2   0.1   2.3e-05     0.063       1      17 [.      52      68 ..      52      72 .. 0.85
   4 !    5.7   0.1    0.0066        18       1      17 [.      74      90 ..      74      94 .. 0.83
   5 !    7.2   0.3    0.0021       5.8       1      13 [.      96     108 ..      96     109 .] 0.90

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 1.5
                EEETSSB CS
  PF00560.28  5 LdLsgNn 11
                L Ls+ n
  MMETSP1325-20131115|8840_1 12 LRLSFKN 18
                6666533 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0012
                TESEEEETSSBCBCHHHHHHHH CS
  PF00560.28  1 nLeeLdLsgNnltslppslsnL 22
                +L++L L++N ++++ + l +L
  MMETSP1325-20131115|8840_1 30 SLTKLCLDNNMIKEICN-LDHL 50
                69*************99.8876 PP

  == domain 3    score: 13.2 bits;  conditional E-value: 2.3e-05
                TESEEEETSSBCBCHHH CS
  PF00560.28  1 nLeeLdLsgNnltslpp 17
                +L+ LdLs+N+++++  
  MMETSP1325-20131115|8840_1 52 HLQWLDLSFNSISKIEG 68
                79***********9976 PP

  == domain 4    score: 5.7 bits;  conditional E-value: 0.0066
                TESEEEETSSBCBCHHH CS
  PF00560.28  1 nLeeLdLsgNnltslpp 17
                nL+ L+L +N+++++  
  MMETSP1325-20131115|8840_1 74 NLTDLSLFSNRISEVEG 90
                899*********98765 PP

  == domain 5    score: 7.2 bits;  conditional E-value: 0.0021
                 TESEEEETSSBCB CS
  PF00560.28   1 nLeeLdLsgNnlt 13 
                 +L+ L+L +N+++
  MMETSP1325-20131115|8840_1  96 QLQCLSLGNNQIS 108
                 69*********98 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.1   5.9e+03       4      10 ..      10      16 ..      10      25 .. 0.70
   2 !    5.8   0.3    0.0071        19       2      16 ..      30      44 ..      29      50 .. 0.83
   3 !    6.7   0.0    0.0036       9.8       2      15 ..      52      65 ..      51      69 .. 0.85
   4 !    9.8   0.1   0.00034      0.94       1      15 [.      73      87 ..      73      91 .. 0.89
   5 !    7.9   0.2    0.0015       4.1       1      14 [.      95     108 ..      95     109 .] 0.88

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 2.1
   PF13504.1  4 keLdLsg 10
                ++L+Ls 
  MMETSP1325-20131115|8840_1 10 TTLRLSF 16
                5788874 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0071
   PF13504.1  2 nLkeLdLsgnrLtsL 16
                +L++L L +n ++++
  MMETSP1325-20131115|8840_1 30 SLTKLCLDNNMIKEI 44
                8********977654 PP

  == domain 3    score: 6.7 bits;  conditional E-value: 0.0036
   PF13504.1  2 nLkeLdLsgnrLts 15
                +L+ LdLs n++  
  MMETSP1325-20131115|8840_1 52 HLQWLDLSFNSISK 65
                899*******9865 PP

  == domain 4    score: 9.8 bits;  conditional E-value: 0.00034
   PF13504.1  1 pnLkeLdLsgnrLts 15
                +nL++L+L +nr+ +
  MMETSP1325-20131115|8840_1 73 TNLTDLSLFSNRISE 87
                79**********976 PP

  == domain 5    score: 7.9 bits;  conditional E-value: 0.0015
   PF13504.1   1 pnLkeLdLsgnrLt 14 
                 ++L+ L+L +n++ 
  MMETSP1325-20131115|8840_1  95 TQLQCLSLGNNQIS 108
                 68*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.33s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 567.83
//
Query:       MMETSP1325-20131115|8841_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.018   14.6   0.0      0.023   14.3   0.0    1.2  1  PF02892.10 BED zinc finger
      0.043   12.4   0.0      0.043   12.4   0.0    1.0  1  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF02892.10  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.3e-06     0.023       2      36 ..       9      44 ..       8      46 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.3e-06
  PF02892.10  2 kvWkhftivdgkkqkarCkyCgkilsrg..kngTsnL 36
                ++W+++ iv+ ++    C  C+  +s +  k+++s L
  MMETSP1325-20131115|8841_1  9 NAWRYAFIVP-GDAALACGVCMILFSDDtpKGNISEL 44
                79********.*****************999999987 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.3e-06     0.043     145     185 ..       5      43 ..       2      56 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 6.3e-06
  PF07690.11 145 lasslgWravFlilailsllaavlvllllprepperkrksp 185
                 ++++  Wr++F++ + ++l ++v+  + l+ +++++++ s+
  MMETSP1325-20131115|8841_1   5 MSEYNAWRYAFIVPGDAALACGVC--MILFSDDTPKGNISE 43 
                 566677*****************9..555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 262.68
//
Query:       MMETSP1325-20131115|8835_1  [L=336]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-07   31.5   0.3    6.5e-07   29.4   0.2    1.9  1  PF00169.24 PH domain
    0.00073   18.6   0.0     0.0011   18.0   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.044   12.8   0.0      0.062   12.3   0.0    1.2  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.2   1.4e-10   6.5e-07       2     103 ..     170     289 ..     169     290 .. 0.84

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 1.4e-10
                 SBEEEEEEEE.TSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTT............................CEEEEEESSHHHHHHHHHHHHHHH CS
  PF00169.24   2 ikeGyllkks.ellktwkkryfvLtsnyLlyfksskkksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdv............................esyllsaeseeerkrWvqalknll 103
                 +++G+l+kks +  k+w++r+f L ++ + ++k++      +   si+ln+  t++++++          + f i  + v                               ++ a ++ e+  W++ l+ ++
  MMETSP1325-20131115|8835_1 170 VYSGFLYKKStGMIKSWQRRWFELEGSTVRWMKKKG----DDAYASIQLNSSmTCRDTDQV--------AHRFAIFQEVVvlckgaaaddrpsgssdgggprkseaplVVKEFAARTASEFALWITRLQMAI 289
                 689********************************8....7***********888888874........677777666667777777777777777777777777777799999999999999999999886 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.4e-07    0.0011     186     254 ..       2      73 ..       1      76 [. 0.77

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 2.4e-07
                 HHHHH---HHHHHHTTT-GTTTTS...HHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHH CS
  PF07714.12 186 sDvWsfGvllwEiftlgespypgl...sneevlellkegkrlekpekcpeelyelmkqCweeepeeRptfke 254
                 +Dv+ fG+++ Ei+ + +   +g+   s+++ ++l  e+ r +  +++p+ l +l ++C+++ep++Rp+ ++
  MMETSP1325-20131115|8835_1   2 ADVFGFGMIVTEIVARKAVGKEGFaerSARNNFQLEIEELRESLSAEAPPLLVDLAMECVDYEPDNRPQAED 73 
                 7*************9766665555100444444444667777888999********************9765 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.4e-05     0.062     180     254 ..       2      74 ..       1      77 [. 0.74

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.4e-05
                 HHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHH CS
  PF00069.20 180 vDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeei 254
                 +Dv+++G+i+ e++ +k++ ++   e++ +   +   ++l+e+ + + +  + l dl  ++++++p++R++ae++
  MMETSP1325-20131115|8835_1   2 ADVFGFGMIVTEIVARKAVGKEGFAERSARNNFQLEIEELRESLSAEAP--PLLVDLAMECVDYEPDNRPQAEDA 74 
                 7**************8887777644444444444444455555554444..99******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1610.35
//
Query:       MMETSP1325-20131115|8842_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|8844_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   12.1   0.2       0.21   11.6   0.1    1.2  1  PF06900.6 Protein of unknown function (DUF1270)


Domain annotation for each model (and alignments):
>> PF06900.6  Protein of unknown function (DUF1270)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.5e-05      0.21      12      34 ..      40      62 ..      37      63 .] 0.93

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.5e-05
   PF06900.6 12 vlCftvlaivlmPflyfttaWsl 34
                vlC  vl     P ly+tt  sl
  MMETSP1325-20131115|8844_1 40 VLCVLVLCTHSSPALYYTTVESL 62
                9******************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 284.85
//
Query:       MMETSP1325-20131115|8846_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 784.69
//
Query:       MMETSP1325-20131115|8848_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.084   12.3   0.0       0.15   11.5   0.0    1.3  1  PF09339.5 IclR helix-turn-helix domain


Domain annotation for each model (and alignments):
>> PF09339.5  IclR helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.1e-05      0.15       6      38 ..      74     106 ..      73     108 .. 0.95

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.1e-05
                 HHHHHHH----S-B-HHHHHCCCTS-HHHH--- CS
   PF09339.5   6 laiLdalaeapqelslselArrtglpkStvhRl 38 
                 l+ L+++++ + e  ++++A++tg p ++v R+
  MMETSP1325-20131115|8848_1  74 LQALEQFGRDDVESVVRQVAAETGKPEAAVERY 106
                 688***************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       506  (0.0370099); expected 273.4 (0.02)
Passed bias filter:                      468  (0.0342305); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 587.34
//
Query:       MMETSP1325-20131115|8851_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 426.47
//
Query:       MMETSP1325-20131115|8850_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 487.83
//
Query:       MMETSP1325-20131115|8847_1  [L=330]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-08   33.4   0.0    7.2e-08   32.5   0.0    1.5  1  PF00004.24 ATPase family associated with various cellular activities (AAA)


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   5.2e-12   7.2e-08      65     131 ..       2      67 ..       1      68 [. 0.93

  Alignments for each domain:
  == domain 1    score: 32.5 bits;  conditional E-value: 5.2e-12
                 ETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTT.S.TEEEEEE-SSGGGS-HHHHHTTSCCEEE-- CS
  PF00004.24  65 DEidalaksrsgseseeeervvnqLlteldgvkkk.eskvivigatnrpdkldpallrgRfdrkieie 131
                 DE+d++ ++r g++++  +++ ++++t++dg+ ++ +s+v+v+gatnrp ++d+a+l +R+ r +ei+
  MMETSP1325-20131115|8847_1   2 DELDSFLRQR-GGDESALSNMKAEFMTHWDGLLTDpSSPVMVLGATNRPYDIDQAIL-RRLPRSFEIG 67 
                 9*********.888999999***********98887889******************.7*****9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.38s 00:00:01.02 Elapsed: 00:00:00.59
# Mc/sec: 1340.34
//
Query:       MMETSP1325-20131115|8853_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 422.89
//
Query:       MMETSP1325-20131115|8852_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 1447.80
//
Query:       MMETSP1325-20131115|8857_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 266.76
//
Query:       MMETSP1325-20131115|8860_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.47
# Mc/sec: 290.62
//
Query:       MMETSP1325-20131115|8855_1  [L=403]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   15.7   2.7      0.035   14.8   1.9    1.7  1  PF13469.1 Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF13469.1  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.9   2.6e-06     0.035       4      75 ..      36     156 ..      33     280 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 2.6e-06
   PF13469.1   4 filGlpRSGttlLaraLlalhpaelgllapqapal.................................................adapkglaeraallpllradll.salrrwdalprllda 75 
                  ++ ++R+G+tl++ ++l+++++ l  l ++ +++                                                   +pkg+++r   +  + ++l  ++ ++ da+p++l++
  MMETSP1325-20131115|8855_1  36 WVWNTGRCGSTLMH-RMLSTQEETLASLSEPYWFDqlalaahgenseptdaaivglvhvchvleygqivrhaqlnirkhmptmfIMNPKGFGHRLLEHVVRAFPLQtADAAAADAEPWPLRH 156
                 68899*********.99977777555555555555444444444444444444444444444445555555555555555555555555555555555555555555555555555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.38s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 1724.52
//
Query:       MMETSP1325-20131115|8863_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 489.05
//
Query:       MMETSP1325-20131115|8862_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-17   62.7   0.0    2.2e-17   61.9   0.0    1.3  1  PF00240.18 Ubiquitin family
    1.2e-09   37.6   0.0    1.7e-09   37.0   0.0    1.3  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
    0.00077   19.4   0.0     0.0015   18.5   0.0    1.5  1  PF10302.4  DUF2407 ubiquitin-like domain
  ------ inclusion threshold ------
      0.013   15.9   0.0      0.028   14.8   0.0    1.6  1  PF08817.5  WXG100 protein secretion system (Wss), protein YukD
      0.031   13.9   0.0      0.077   12.7   0.0    1.7  2  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
      0.075   12.6   1.1       0.15   11.7   0.0    2.0  2  PF11522.3  Yeast phosphatidylinositol-4-OH kinase Pik1
       0.13   11.8   0.5       0.46   10.0   0.4    1.9  1  PF11890.3  Domain of unknown function (DUF3410)
        8.3    5.8  30.1        6.8    6.1   8.6    4.0  3  PF09280.6  XPC-binding domain


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.0   1.3e-20   2.2e-17       6      67 ..      75     136 ..      68     137 .. 0.94

  Alignments for each domain:
  == domain 1    score: 61.9 bits;  conditional E-value: 1.3e-20
                 EEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEES CS
  PF00240.18   6 ktitlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlr 67 
                 +++t++v+ ++tv e+K  i+ +  +p++qqrLi+ G+vL+Dd tl +y+i d++t+hlv +
  MMETSP1325-20131115|8862_1  75 NKFTVSVPMDTTVVEFKGLIAGQASCPAEQQRLIHRGRVLKDDATLDSYGISDSHTIHLVRS 136
                 57*********************************************************975 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0     1e-12   1.7e-09       1      71 [.      65     134 ..      65     135 .. 0.98

  Alignments for each domain:
  == domain 1    score: 37.0 bits;  conditional E-value: 1e-12
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE CS
   PF11976.3   1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvv 71 
                 +++++++ d ++++++V  dtt+ + +   + + + p+ eq+rLi  G+ L++++t+++++i d  ti++v
  MMETSP1325-20131115|8862_1  65 MTLTVQCTDANKFTVSVPMDTTVVEFKGLIAGQASCPA-EQQRLIHRGRVLKDDATLDSYGISDSHTIHLV 134
                 79************************************.******************************97 PP

>> PF10302.4  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   8.7e-07    0.0015      15      63 ..      76     122 ..      63     161 .. 0.86

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 8.7e-07
   PF10302.4  15 rldinspnsltvaeLkrliRerlpgdlsrrrLrlIyaGkvLndesalas 63 
                 + +++ p  +tv+e+k li  +   ++  ++ rlI++G+vL+d ++l s
  MMETSP1325-20131115|8862_1  76 KFTVSVPMDTTVVEFKGLIAGQA--SCPAEQQRLIHRGRVLKDDATLDS 122
                 456667799************99..88889999***********99987 PP

>> PF08817.5  WXG100 protein secretion system (Wss), protein YukD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.6e-05     0.028      16      78 ..      78     133 ..      63     134 .. 0.67

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.6e-05
   PF08817.5  16 dlaLpadlPvrelipalvrlln..lpgadasgqgqyslapikgapLsldatLddagVvdGdlLvL 78 
                 ++ +p d        ++v +++  ++g+ + ++ q +l    g++L++datLd +g+ d +++ L
  MMETSP1325-20131115|8862_1  78 TVSVPMD--------TTVVEFKglIAGQASCPAEQQRLI-HRGRVLKDDATLDSYGISDSHTIHL 133
                 4444444........444444455444444445567899.99*****************988765 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.5e-05     0.077      49      90 ..     103     138 ..      82     156 .. 0.81
   2 ?   -3.5   0.0       4.7     8e+03      82     101 ..     243     262 ..     234     272 .. 0.56

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.5e-05
                 GGEEEE----B--TTSBGGGGS--TTS-----EEEEEEE--- CS
   PF13881.1  49 ndlklilaGkiLednktLkelrlplgevkggvtvmHvvvrea 90 
                 ++ +li+ G++L+d+ tL +++++  +      ++H+v + a
  MMETSP1325-20131115|8862_1 103 EQQRLIHRGRVLKDDATLDSYGIS--DS----HTIHLVRSTA 138
                 5669*****************665..44....4588876554 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 4.7
                 EEEEEE---SS----.---- CS
   PF13881.1  82 vmHvvvrealaekeeekkkk 101
                 + Hv   +al+ ++ e +++
  MMETSP1325-20131115|8862_1 243 LNHVLNDPALMRQTMEMARN 262
                 45666666666555555444 PP

>> PF11522.3  Yeast phosphatidylinositol-4-OH kinase Pik1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   1.1       3.5   5.9e+03      12      22 ..     191     201 ..     190     238 .. 0.62
   2 ?   11.7   0.0   8.8e-05      0.15       3      23 ..     286     306 ..     285     318 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 3.5
   PF11522.3  12 NklQnilFnls 22 
                 N++Q++l  + 
  MMETSP1325-20131115|8862_1 191 NRMQQQLMQNP 201
                 66666665443 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 8.8e-05
   PF11522.3   3 gFqvcrrvlNklQnilFnlsa 23 
                 gFq  rr+++++Q+ +   s 
  MMETSP1325-20131115|8862_1 286 GFQALRRMYTDVQEPMMQASI 306
                 8*************9988875 PP

>> PF11890.3  Domain of unknown function (DUF3410)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.4   0.00027      0.46       6      61 ..     220     299 ..     215     313 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00027
   PF11890.3   6 pelsqlsltseldeaalakllrlvYDvrrDdaalRral........................ekaegFdalRknYpeRrE 61 
                 pel +  + s+ + +++ ++  +   v  D a++R+++                        ++++gF+alR+ Y++  E
  MMETSP1325-20131115|8862_1 220 PELIRNMFMSNPQMQQVLEANPQLNHVLNDPALMRQTMemarnpaamqqmmrnqdlamsqleNHPGGFQALRRMYTDVQE 299
                 555555566666666666777777777778888888888888888888888999999999999************97555 PP

>> PF09280.6  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   8.6     0.004       6.8       4      40 ..     184     224 ..     182     232 .. 0.72
   2 ?   -3.7  10.7       4.6   7.8e+03       6      50 ..     229     277 ..     211     286 .. 0.53
   3 ?   -1.8   0.0       1.1   1.9e+03       3      16 ..     279     293 ..     275     294 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.004
   PF09280.6   4 LrdqpqfqqlrqvvqqnPelLqplLqq.Lgqs...nPqllq 40 
                 ++  p++++++q + qnPe++q ++++ + qs   nP+l++
  MMETSP1325-20131115|8862_1 184 MGGPPDMNRMQQQLMQNPEMMQSIMNSpMMQSlmdNPELIR 224
                 66789*****************9987433332233777765 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 4.6
   PF09280.6   6 dqpqfqqlrqvvqqnPel...L..qplLqqLg..qsnPqllqlIqqnqeeFl 50 
                 ++pq   ++qv+ +nP+l   L  ++l++q    ++nP+ +q++++nq+  +
  MMETSP1325-20131115|8862_1 229 SNPQ---MQQVLEANPQLnhvLndPALMRQTMemARNPAAMQQMMRNQDLAM 277
                 4443...445555555531112222344333211567777777777776555 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 1.1
   PF09280.6   3 fLrdqp.qfqqlrqv 16 
                 +L ++p  fq+lr++
  MMETSP1325-20131115|8862_1 279 QLENHPgGFQALRRM 293
                 567777349999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.68u 0.37s 00:00:01.05 Elapsed: 00:00:00.52
# Mc/sec: 1506.94
//
Query:       MMETSP1325-20131115|8865_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-09   36.6   0.0    0.00024   20.8   0.0    2.1  2  PF01453.19 D-mannose binding lectin


Domain annotation for each model (and alignments):
>> PF01453.19  D-mannose binding lectin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   3.6e-08   0.00049      26      81 ..       2      73 ..       1      77 [. 0.76
   2 !   20.8   0.0   1.8e-08   0.00024      18      79 ..      37     107 ..      32     113 .] 0.75

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 3.6e-08
                -----EEEEE--.........CEE-.STTSTT...EEEEEE--T--CEEE..-.....GGTEEEEE...TTH CS
  PF01453.19 26 qadGnLvlydna......getvWssnvtsskss.kntravLqdsGnLvlrd.s.....sgavlWqS...fdh 81
                q+dG++v+y  +       +++Ws+n+ +++ +  + r+vL+  G L l++ +         +W+S    dh
  MMETSP1325-20131115|8865_1  2 QRDGQFVVYRDQrnsgdaAKAMWSTNTYKGEMEgISYRLVLTRAGSLELQQfNesdsrMLGLVWSSppdPDH 73
                78*******655699997667****8877777778899***********95445666655689999554455 PP

  == domain 2    score: 20.8 bits;  conditional E-value: 1.8e-08
                 .SSEEEEE-----EEEEE--.........CEE-....STTSTT..EEEEEE--T--CEEE.-..GGTEEEEET CS
  PF01453.19  18 sgsykLklqadGnLvlydna......getvWss...nvtssksskntravLqdsGnLvlrds..sgavlWqSf 79 
                 s  y+L l++ G+L l++ +         vWss      s++   +  a+L  +Gn+ ++ +    + +W+S 
  MMETSP1325-20131115|8865_1  37 S--YRLVLTRAGSLELQQFNesdsrmLGLVWSSppdPDHSGNVDGKYIAKLEGNGNFAVYLKtpCPSLIWESG 107
                 4..9*************877789875335****775333444446788************65465669**993 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 564.14
//
Query:       MMETSP1325-20131115|8856_1  [L=727]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (727 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.04u 0.35s 00:00:01.39 Elapsed: 00:00:00.56
# Mc/sec: 3110.98
//
Query:       MMETSP1325-20131115|8867_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|8868_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 464.60
//
Query:       MMETSP1325-20131115|8871_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   14.0   0.0      0.013   14.0   0.0    1.0  1  PF09731.4 Mitochondrial inner membrane protein


Domain annotation for each model (and alignments):
>> PF09731.4  Mitochondrial inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   9.6e-07     0.013     436     509 ..      23      94 ..       7      97 .] 0.74

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 9.6e-07
   PF09731.4 436 elkaLkel.akdDelvsaalaslpeeasqrgilseeqLrnRFnkvakelRkasLldpenaGllghllSyllSlll 509
                 e+ +L  +  ++  l+s a++++p ++     +s ++L++RF+ v    R a+++++   G  g +   ll+ +l
  MMETSP1325-20131115|8871_1  23 EVMQLDHAtGSETRLASQAIQAVPVKSVP---PSLAELQTRFKAVHHAGRCAAMVPEGMTGAEGRFIGQLLATFL 94 
                 55555555455556666677777766666...999********************88777777777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 447.01
//
Query:       MMETSP1325-20131115|8866_1  [L=481]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-07   29.5   0.0    7.4e-07   28.7   0.0    1.4  1  PF00168.25 C2 domain
  ------ inclusion threshold ------
      0.077   12.5   0.0       0.12   11.9   0.0    1.2  1  PF14180.1  GTP-GDP exchange factor


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   1.1e-10   7.4e-07       2      84 ..      65     167 ..      64     168 .. 0.86

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 1.1e-10
                 EEEEEEESS--S-S.TSSSS-EEEEEEEECTTEEE..................EEE--BSS-SSEEEEEEEEEEESCGGGTE..EEEEEEECHSSSCSEE---E CS
  PF00168.25   2 kvkvieAknLpnkd.kngtsdpyvkvslggakskk..................krTrvikntlnPvWnekftfevvaeelae..leleVkdedrfgkddflGea 84 
                 +v v+eA +L++ + + + sdp  +++l+g k +                   +++ v  +tl+P + e+f+f+v+ ++ +e  l + ++d+ + + + f+G++
  MMETSP1325-20131115|8866_1  65 EVFVLEAFGLKAVNsGAKDSDPQLVLYLSGLKDNPlegidkskkkrkkggpevYKSAVQYRTLEPEFCESFSFSVPTANNEEveLVINMHDSGMTK-QTFMGQV 167
                 789*********9944449***********6663377889999*******************************8888888877888888888887.*****98 PP

>> PF14180.1  GTP-GDP exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.7e-05      0.12      57      96 ..     115     154 ..      75     187 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.7e-05
   PF14180.1  57 vssafssvlyhnknpnFndeiKlkLPldltekhhLlFtfy 96 
                    ++s+v y++ +p+F++ +  ++P+  +e+  L++   
  MMETSP1325-20131115|8866_1 115 PEVYKSAVQYRTLEPEFCESFSFSVPTANNEEVELVINMH 154
                 56799***************************99998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.80u 0.37s 00:00:01.17 Elapsed: 00:00:00.54
# Mc/sec: 2134.53
//
Query:       MMETSP1325-20131115|8872_1  [L=393]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-07   31.4   0.9    3.2e-07   30.0   0.2    2.1  2  PF13563.1  2'-5' RNA ligase superfamily


Domain annotation for each model (and alignments):
>> PF13563.1  2'-5' RNA ligase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.2   2.4e-11   3.2e-07      22     124 ..       7     142 ..       2     200 .. 0.78
   2 ?   -1.3   0.0      0.11   1.5e+03      16      56 ..     200     244 ..     178     250 .. 0.64

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 2.4e-11
   PF13563.1  22 prwppHiTLlypfvepedl.....adlaellsrlaaetep.....fevrldgvgvFeh.kksvvylsvspseslsaLraallealpeagdkedst..............geftPHlTiaqsedstsa.........k 124
                 + + +H+T+++ +++p +l       + + +  la + +p     ++++l+++  F++ k++ v  s +   +l++L+a++ ea  + g+  + +                ++PH+T++  ++s++          +
  MMETSP1325-20131115|8872_1   7 APHALHVTMFFAGKHPSSLsgaelR-AWHGAVALAVAADPalrggVPLTLTSFELFPPgKNNLVVASFEAPRALHDLHARVMEASLKVGLGTSGSvrralaatarerneALWRPHMTLGKIKASRAEvdkvgrvlcE 142
                 5688*****************9953.4444444444555557777*************6666**********************5555444333355566888888888***********99999986555543331 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.11
   PF13563.1  16 lydkayprwppHiTLlypfvepedl....adlaellsrlaaetep 56 
                 +++++     +H+T     ++++      +++  +++ +aa++ep
  MMETSP1325-20131115|8872_1 200 VGQPKQVWLDWHLTFPEASEYDDREategEATDGAAAAAAAAHEP 244
                 444555555678888777777777666666666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 1776.92
//
Query:       MMETSP1325-20131115|8874_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.047   13.5   0.1      0.076   12.9   0.1    1.3  1  PF02829.9 3H domain
        7.4    5.7   9.5        8.1    5.5   6.6    1.0  1  PF05539.6 Pneumovirinae attachment membrane glycoprotein G


Domain annotation for each model (and alignments):
>> PF02829.9  3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.1e-05     0.076      41      78 ..      27      64 ..      13      71 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.1e-05
   PF02829.9 41 lnissredvkkfveklekskakpLseltegvHlHtiea 78
                ++  + +++k   +++ +++ ++L+ lt+++Hl t+++
  MMETSP1325-20131115|8874_1 27 IMSDQAQEIKAHTDSIMSDQVEELKALTDNLHLTTVAT 64
                5667889***************************9986 PP

>> PF05539.6  Pneumovirinae attachment membrane glycoprotein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   6.6    0.0012       8.1     204     308 ..      58     161 ..      19     165 .] 0.62

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0012
   PF05539.6 204 eqtataklllastesvltedtatskssepqleprpsqrGkstsdkeassttsqdsstrgdskkhtqrrktppatenrrsilst.atppettkiqetrk.ptpkptae 308
                 + t+ a+   a  ++v  +  +  + ++p+  p+++    s  ++e ++     s+ rg s   tq  ++pp     r + +t a+   t+ + +++    ++pt+ 
  MMETSP1325-20131115|8874_1  58 HLTTVATAVAAVQPPVHEQSDG-GRDARPNGRPPSA--SSSLKSRESATLGRSTSNSRGASTARTQEDQLPPPAPAIRDVSQTqASSVRTPSRRQGYGgRLHQPTNA 161
                 3344455555555555444444.4455566666555..4566677777777888888*************9999999998876245566777777764146778876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       721  (0.0527355); expected 273.4 (0.02)
Passed bias filter:                      528  (0.0386191); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.46s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 806.94
//
Query:       MMETSP1325-20131115|8877_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-25   86.8   0.0      1e-24   86.7   0.0    1.0  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.7   0.0   7.6e-29     1e-24     262     334 ..       2      72 ..       1      73 [. 0.98

  Alignments for each domain:
  == domain 1    score: 86.7 bits;  conditional E-value: 7.6e-29
                 HHHHHHHHHHHHHHHHHT.TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCT CS
  PF00225.18 262 INkSLlaLgrvIsaLaenkkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakn 334
                 INkSL+aLg+v++aL +   s+hvp+R+SkLT lLqdsLgg+++ + i   sps+ n +et +t +fa+r + 
  MMETSP1325-20131115|8877_1   2 INKSLSALGDVMEALDKG--SNHVPFRNSKLTYLLQDSLGGSARCMFIFAASPSELNSDETRCTFKFAKRLRG 72 
                 9*****************..**************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.27u 0.46s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|8876_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   15.3   0.0       0.02   14.7   0.0    1.3  1  PF10383.4 Transcription-silencing protein Clr2


Domain annotation for each model (and alignments):
>> PF10383.4  Transcription-silencing protein Clr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.5e-06      0.02      54     100 ..      27      73 ..      16      93 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.5e-06
   PF10383.4  54 eedpdlkstvrvsGkiYtivrqrayaalttpiearekkpeadalave 100
                  e++  +++v++sG i+ i++  ++++l+ p+ a+e +p ++ala e
  MMETSP1325-20131115|8876_1  27 AETQGHRRQVTISGPIWDISQLPSPDDLNIPADADEARPSMPALAEE 73 
                 44566778*******************************99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 1107.12
//
Query:       MMETSP1325-20131115|8875_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0022   17.3   0.0      0.058   12.6   0.0    2.1  2  PF10018.4 Vitamin-D-receptor interacting Mediator subunit 4
  ------ inclusion threshold ------
      0.065   13.1   1.4       0.46   10.4   0.0    2.7  3  PF08898.5 Domain of unknown function (DUF1843)
       0.11   11.3   0.0       0.13   11.0   0.0    1.0  1  PF09139.6 Mitochondrial matrix Mmp37


Domain annotation for each model (and alignments):
>> PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1     0.017        76     137     180 ..       6      49 ..       5      68 .. 0.67
   2 !   12.6   0.0   1.3e-05     0.058      29      63 ..      86     120 ..      81     137 .. 0.90

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.017
   PF10018.4 137 GlLaqlqllaeegeerpgfdpeeeeerkaeeaeeeeaeakteee 180
                 G La+++ la+++ +   +d+ ++ + +++++e ++++++++ e
  MMETSP1325-20131115|8875_1   6 GDLARIKALAKRALSEMVYDEVQSRTGAITAQELQTNPRSNKRE 49 
                 66788888888888888888888877777666654444444333 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 1.3e-05
   PF10018.4  29 arikeLraeaeslDeqikdilkeLkearkeLkslp 63 
                 +r+++L++e++ lDe + ++++  + ++++L+++ 
  MMETSP1325-20131115|8875_1  86 KRVEQLQRESALLDEALTGCVQGIVRMESSLRTVA 120
                 899*****************************985 PP

>> PF08898.5  Domain of unknown function (DUF1843)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0    0.0001      0.46      12      26 ..       4      18 ..       3      24 .. 0.89
   2 ?   -0.8   0.1      0.32   1.4e+03      31      48 ..      55      73 ..      45      78 .. 0.60
   3 ?   -0.3   0.0      0.22   9.8e+02      25      51 ..      87     113 ..      84     115 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0001
   PF08898.5 12 asGDLaqMKaLlaqa 26
                a GDLa++KaL+++a
  MMETSP1325-20131115|8875_1  4 AAGDLARIKALAKRA 18
                67**********998 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.32
   PF08898.5 31 aeadelaaAle.kLkaEIa 48
                + a +la+Al  ++  EIa
  MMETSP1325-20131115|8875_1 55 KMAHQLAKALRgEAGDEIA 73
                5566777776424556666 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 0.22
   PF08898.5  25 qaeqqlaeadelaaAlekLkaEIarlE 51 
                 + eq   e   l +Al    + I r E
  MMETSP1325-20131115|8875_1  87 RVEQLQRESALLDEALTGCVQGIVRME 113
                 567777777888888888888887777 PP

>> PF09139.6  Mitochondrial matrix Mmp37
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     3e-05      0.13     203     310 ..       8     120 ..       4     129 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3e-05
   PF09139.6 203 lenfrelYkplleeleevnlksk.kaeakaekkkvkleqdkdpekrlnllrsLPkelrsklykeveeklkkreaeevlkeiasde....elkkeveklikkivskssltqtvk 310
                 l++ + l k  l+e+   +++s+ +a + +e +++  +++ + +++++++ +L k+lr +   e+++  ++  +e+v+k++ + +     l + ++ +++ iv++ s  +tv 
  MMETSP1325-20131115|8875_1   8 LARIKALAKRALSEMVYDEVQSRtGAITAQELQTNPRSNKREVQNVFKMAHQLAKALRGEAGDEIASAARRGGVEDVWKRVEQLQresaLLDEALTGCVQGIVRMESSLRTVA 120
                 5667777788888888888888855566666666677778889999***********************99999999999987662222346667777778888777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      376  (0.0275015); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.49s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 831.39
//
Query:       MMETSP1325-20131115|8879_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-24   85.3   0.0    2.6e-24   85.1   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.1   0.0   1.9e-28   2.6e-24       4     108 ..      18     123 ..      15     124 .] 0.94

  Alignments for each domain:
  == domain 1    score: 85.1 bits;  conditional E-value: 1.9e-28
  PF03028.10   4 tvkspkldwlteqewesiaalseleefkgleddleksekrwkkwldseapeeeklpkewkkrk.salekLlllralrpDrlllavknfveeklgekfvesqeldls 108
                 + ++p  dw+  + w++ia+l ++ +f g+++ +++ +++wk+w+ s++pe e+lp +w++++ ++l+++++lr lrpDr+l ++++fv+++lg+ + +++++dl+
  MMETSP1325-20131115|8879_1  18 QRPNPCPDWIDANTWDNIAELDKIPQFMGIASAFDQGARDWKNWYMSAKPESEPLPGDWENKCsNELQRMCILRSLRPDRVLFSATSFVAQNLGQAYADPPAFDLK 123
                 5678999*****************************************************965268***********************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 606.43
//
Query:       MMETSP1325-20131115|8882_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.044   13.0   0.1      0.044   13.0   0.1    1.0  1  PF10866.3 Protein of unknown function (DUF2704)


Domain annotation for each model (and alignments):
>> PF10866.3  Protein of unknown function (DUF2704)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   3.2e-06     0.044     135     159 ..      10      34 ..       2      44 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.2e-06
   PF10866.3 135 selsddaakydvsaeyikPncivdt 159
                  el+ da+ y  s++y+k  c+ d 
  MMETSP1325-20131115|8882_1  10 MELQADACSYASSKNYMKGKCVSDY 34 
                 589******************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.52
# Mc/sec: 230.42
//
Query:       MMETSP1325-20131115|8883_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|8881_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-15   55.0   0.1    8.3e-15   54.4   0.1    1.2  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
    0.00049   19.5   0.2    0.00076   18.8   0.2    1.3  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase
     0.0018   18.0   0.0       0.15   11.8   0.0    2.3  2  PF02820.13 mbt repeat


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   0.1   1.8e-18   8.3e-15       1      66 [.     149     213 ..     149     216 .. 0.93

  Alignments for each domain:
  == domain 1    score: 54.4 bits;  conditional E-value: 1.8e-18
                 -----------THHHHHHHHHHHTSHHHHHHHHTTHCCH....H-TTHHTTTHHHHHHHHHHHHH- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00443.24   1 ngvtGleNlGntCYmnsvlQcLvsipelrdyllryeervaeineeneleeeaqlaraladlfkklv 66 
                 ng +Gl+NlGntC+mns+lQcL+++++l +++l  + r+ + n++n l+  ++l ++ a+l+++ +
  MMETSP1325-20131115|8881_1 149 NGSVGLNNLGNTCFMNSMLQCLTHTQPLTEFFLDGKYRS-DLNKDNVLGTGGKLTESYAQLVSEYW 213
                 5789*******************************9888.8********************99875 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.2   1.7e-07   0.00076       1      31 [.     152     182 ..     152     195 .. 0.89

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 1.7e-07
   PF13423.1   1 aGlennlnncYlnaLLqllfftldlfeailk 31 
                 +Gl n +n+c++n++Lq l  t++l e+ l 
  MMETSP1325-20131115|8881_1 152 VGLNNLGNTCFMNSMLQCLTHTQPLTEFFLD 182
                 7************************999875 PP

>> PF02820.13  mbt repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   3.4e-05      0.15      26      52 ..       2      28 ..       1      34 [. 0.93
   2 ?    3.8   0.0      0.01        47      39      57 ..      95     113 ..      86     118 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.4e-05
                EEEEEE----CCG-EEEETT-TTEE-- CS
  PF02820.13 26 rlrlrldgydsendfwvdvdSpdIfPv 52
                ++r+++ g+++++d w +  S++++P 
  MMETSP1325-20131115|8881_1  2 KVRVHFMGWSEKFDEWKERSSTQLQPF 28
                799*********************995 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.01
                 -EEEETT-TTEE----TTT CS
  PF02820.13  39 dfwvdvdSpdIfPvGwcek 57 
                 + wv v+S+ I ++G+++k
  MMETSP1325-20131115|8881_1  95 ETWVAVESELICAMGTHTK 113
                 79*************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 949.83
//
Query:       MMETSP1325-20131115|8884_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.61
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|8885_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-08   31.7   0.1    1.1e-07   31.5   0.1    1.0  1  PF00156.22 Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> PF00156.22  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.1   7.8e-12   1.1e-07      52     122 ..       4      79 .]       2      79 .] 0.85

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 7.8e-12
                 HHHH-----SS-S.....EE---------EEEEES-GGGGTTSEEEEEEEEE----HHHH---TTTT----EEEEE CS
  PF00156.22  52 pldlvrvrkssap.....assetsrkreaailesrpeedlkgkrvliVDDvlatGgTlraaielLkeagakevgva 122
                 p +++r+++s  +      s++ ++++ ++ l +++  + +++rvl+VDD+l++G++ +a+++++ +a a+++gva
  MMETSP1325-20131115|8885_1   4 PVVYARKERSVVMsdtyaVSYSSKTSGSNKELLVSKRHIDEDDRVLLVDDFLSSGAAQEALMRIVAQASATPIGVA 79 
                 55666666665557777778888888889999999999999********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 338.06
//
Query:       MMETSP1325-20131115|8886_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-21   76.8   0.0    1.1e-21   76.8   0.0    1.0  1  PF00152.15 tRNA synthetases class II (D, K and N)


Domain annotation for each model (and alignments):
>> PF00152.15  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.8   0.0   8.4e-26   1.1e-21     213     312 ..       4      99 .]       1      99 [] 0.94

  Alignments for each domain:
  == domain 1    score: 76.8 bits;  conditional E-value: 8.4e-26
                 HHHHH--SSEEEEE--BCCCSTTTBBBCCCCTTBBS-EEEEE--.-EEEE--EB---HHHHHHHHHH----CCCHHHHCHHHHHCCT-----EE-EEE-EH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00152.15 213 klidekkskplfvvdfPleehpftkpkeedekalaeafDlvlng.vElggGseRihdpeeqekrfeeqgldeeeaeekfgfllealkyGapphgGialGlD 312
                 +l+++  + pl+ +++P+  ++f+++ +ed  +++ a+D++++  +E++gGs+R+++++++ +r +e+g+++e      +++l+++kyG++ph+G++lG++
  MMETSP1325-20131115|8886_1   4 YLAEKIFKGPLICTNYPKGIKAFYMKLNEDG-KTVGAMDILVPRiGEIIGGSVREDRYDVLIERAQEEGVQPED----LSWYLDLRKYGTVPHAGFGLGFE 99 
                 55566678899*******************9.9**********99*****************************....*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|8889_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.35s 00:00:00.63 Elapsed: 00:00:00.50
# Mc/sec: 254.01
//
Query:       MMETSP1325-20131115|8892_1  [L=247]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-39  131.9   0.0      1e-38  131.5   0.0    1.1  1  PF01412.13 Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> PF01412.13  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.5   0.0   7.6e-43     1e-38       2     114 ..      35     148 ..      34     151 .. 0.90

  Alignments for each domain:
  == domain 1    score: 131.5 bits;  conditional E-value: 7.6e-43
                 HHHHHHCCSGGGCB-TTT--BS--EEETTTTEEE-TTTHHHHHCST.TT--EEETTTS---HHHHHHHHH---HHHHHHHCCC..TTTS---TTTCGHHHHHHHHHHHHTCHTCC CS
  PF01412.13   2 kllkellkepenkvCaDCgaknptWaslnlgvflCieCsgvhrslgvhiskvkSltldkwteeqlellkelgNkkaneileak..sekskkiksesdkekreefirakYeekkfa 114
                 k l++llk pen++CaDC +k+p+Was +lgvf+CieCsg+hr+lg+his+v+S++ld+w+  q+ell+++gN +a++++ea+    +++ +++ +   +++++ir+kYe k+f 
  MMETSP1325-20131115|8892_1  35 KRLEALLKLPENQICADCPTKQPRWASPKLGVFMCIECSGIHRNLGTHISFVRSVNLDEWQVPQVELLEAWGNARAKAYYEAEvpI-DYRIPPEGAGAREVQRWIRDKYEFKRFL 148
                 68999******************************************************************************743.4444555667777888*******99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.41s 00:00:00.94 Elapsed: 00:00:00.53
# Mc/sec: 1116.79
//
Query:       MMETSP1325-20131115|8894_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.65
# Mc/sec: 217.52
//
Query:       MMETSP1325-20131115|8893_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-50  169.7   4.5      2e-18   66.3   0.5    3.1  3  PF12796.2  Ankyrin repeats (3 copies)
    3.8e-39  130.4   3.1    2.3e-07   30.1   0.0    6.1  6  PF00023.25 Ankyrin repeat
    1.1e-33  114.3   6.7    2.7e-08   33.6   0.0    4.6  5  PF13857.1  Ankyrin repeats (many copies)
    3.1e-31  107.0   1.2    3.6e-10   39.9   0.0    4.2  4  PF13637.1  Ankyrin repeats (many copies)
    1.1e-26   90.0   0.3    4.6e-05   23.1   0.0    6.2  6  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
       0.15   11.4   0.0        0.3   10.4   0.0    1.5  1  PF03158.8  Multigene family 530 protein


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0   8.8e-19     2e-15      11      89 .]       1      84 [.       1      84 [. 0.93
   2 !   66.3   0.5   8.6e-22     2e-18       1      88 [.      58     149 ..      58     150 .. 0.98
   3 !   60.0   0.0   8.5e-20   1.9e-16      17      87 ..     107     181 ..     102     183 .. 0.92

  Alignments for each domain:
  == domain 1    score: 56.7 bits;  conditional E-value: 8.8e-19
   PF12796.2 11 elvklLle.kgadvdl.get...pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89
                +++k+L+e +gadv+   ++   pL +A+++g++++ k+L+e+gad+++    g+ +Lh+A+   + +lv +Ll++  dvn++d
  MMETSP1325-20131115|8893_1  1 DILKKLVEeEGADVNSlDDQkcaPLIWAIRNGHKDVTKYLIEQGADIESPGFGGMRALHFACNGAKEDLVVILLDNNVDVNSQD 84
                6899***8799****97333689**********************************************************986 PP

  == domain 2    score: 66.3 bits;  conditional E-value: 8.6e-22
   PF12796.2   1 LhlAaengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                 Lh+A++  + +lv +Ll+++ dv+     g+t+Lh+A+++g l+i+  L ++gad+n ++k+g t++h A+++g+l +vk ++e+g +vn  
  MMETSP1325-20131115|8893_1  58 LHFACNGAKEDLVVILLDNNVDVNSqddvGNTALHWASARGILNIAIRLGDKGADMNLTNKQGVTAMHKAAMFGQLAVVKRIIEYGGNVNTA 149
                 8***************************************************************************************9976 PP

  == domain 3    score: 60.0 bits;  conditional E-value: 8.5e-20
   PF12796.2  17 lekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87 
                  +kgad++l    g t++h Aa  g+l++vk ++e+g +vn+ dkegntpLh+A + g   +v +Ll+kgad+ +
  MMETSP1325-20131115|8893_1 107 GDKGADMNLtnkqGVTAMHKAAMFGQLAVVKRIIEYGGNVNTADKEGNTPLHMASKVGFGQIVTFLLSKGADKGA 181
                 589*****98777777********************************************************865 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.013        29      16      33 .]       1      19 [.       1      19 [. 0.88
   2 !   27.1   0.0   9.2e-10   2.1e-06       5      29 ..      24      48 ..      21      51 .. 0.93
   3 !   18.0   0.1   6.8e-07    0.0015       2      33 .]      54      85 ..      53      85 .. 0.94
   4 !   23.8   0.1     1e-08   2.3e-05       2      33 .]      87     118 ..      86     118 .. 0.97
   5 !   22.0   0.0   3.7e-08   8.4e-05       2      33 .]     120     151 ..     119     151 .. 0.94
   6 !   30.1   0.0     1e-10   2.3e-07       2      32 ..     153     183 ..     152     184 .. 0.93

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.013
                HHHHHHHH.TTSSTTHBHT CS
  PF00023.25 16 evvklLls.qGAdlnaqdd 33
                +++k L++  GAd+n  dd
  MMETSP1325-20131115|8893_1  1 DILKKLVEeEGADVNSLDD 19
                6888899999*****9997 PP

  == domain 2    score: 27.1 bits;  conditional E-value: 9.2e-10
                HHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25  5 PLHlAalrgnlevvklLlsqGAdln 29
                PL +A+++g+++v k+L++qGAd+ 
  MMETSP1325-20131115|8893_1 24 PLIWAIRNGHKDVTKYLIEQGADIE 48
                9**********************85 PP

  == domain 3    score: 18.0 bits;  conditional E-value: 6.8e-07
                SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                G+ +LH A+     + v  Ll+++ d+n qdd
  MMETSP1325-20131115|8893_1 54 GMRALHFACNGAKEDLVVILLDNNVDVNSQDD 85
                5669**************************97 PP

  == domain 4    score: 23.8 bits;  conditional E-value: 1e-08
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 G+T+LH+A+ rg l+++  L ++GAd n++++
  MMETSP1325-20131115|8893_1  87 GNTALHWASARGILNIAIRLGDKGADMNLTNK 118
                 9***************************9986 PP

  == domain 5    score: 22.0 bits;  conditional E-value: 3.7e-08
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 G T+ H Aa+ g+l vvk  +++G ++n  d+
  MMETSP1325-20131115|8893_1 120 GVTAMHKAAMFGQLAVVKRIIEYGGNVNTADK 151
                 89**************************8875 PP

  == domain 6    score: 30.1 bits;  conditional E-value: 1e-10
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                 G+TPLH+A++ g  ++v++Lls+GAd  a +
  MMETSP1325-20131115|8893_1 153 GNTPLHMASKVGFGQIVTFLLSKGADKGASN 183
                 9*************************88876 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   4.4e-10     1e-06       3      56 .]       8      61 ..       6      61 .. 0.92
   2 !   28.3   0.1   5.8e-10   1.3e-06       5      56 .]      44      94 ..      42      94 .. 0.94
   3 !   26.6   0.2     2e-09   4.5e-06       1      49 [.      73     120 ..      72     120 .. 0.97
   4 !   22.7   0.0   3.3e-08   7.6e-05       5      46 ..     110     150 ..     108     151 .. 0.90
   5 !   33.6   0.0   1.2e-11   2.7e-08       2      56 .]     140     193 ..     139     193 .. 0.97

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 4.4e-10
   PF13857.1  3 ehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                e+  advn++d ++  pL +A+++g+ +v ++L+++gad+    + g +al++A
  MMETSP1325-20131115|8893_1  8 EEEGADVNSLDDQKCAPLIWAIRNGHKDVTKYLIEQGADIESPGFGGMRALHFA 61
                555699999999999************************************998 PP

  == domain 2    score: 28.3 bits;  conditional E-value: 5.8e-10
   PF13857.1  5 gpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                g ad+ +   gg+ +Lh+A++g   ++v +Ll++++d n +d  g+tal++A
  MMETSP1325-20131115|8893_1 44 G-ADIESPGFGGMRALHFACNGAKEDLVVILLDNNVDVNSQDDVGNTALHWA 94
                5.78889999***************************************998 PP

  == domain 3    score: 26.6 bits;  conditional E-value: 2e-09
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdg 49 
                 Ll+++ +dvn++d  gnt+Lh+A  +g l++++ L ++gad nl++++g
  MMETSP1325-20131115|8893_1  73 LLDNN-VDVNSQDDVGNTALHWASARGILNIAIRLGDKGADMNLTNKQG 120
                 78998.****************************************997 PP

  == domain 4    score: 22.7 bits;  conditional E-value: 3.3e-08
   PF13857.1   5 gpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrd 46 
                 g ad n t+++g+t+ h+Aa+ g+l vv+ ++++g + n+ d
  MMETSP1325-20131115|8893_1 110 G-ADMNLTNKQGVTAMHKAAMFGQLAVVKRIIEYGGNVNTAD 150
                 5.67799*****************************999866 PP

  == domain 5    score: 33.6 bits;  conditional E-value: 1.2e-11
   PF13857.1   2 lehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                 +e+g  +vn+ d++gntpLh+A k g  ++v +Ll +gad ++ ++  +t+ d+A
  MMETSP1325-20131115|8893_1 140 IEYG-GNVNTADKEGNTPLHMASKVGFGQIVTFLLSKGADKGASNKARQTPADVA 193
                 7889.99**********************************************98 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   3.9e-08     9e-05      16      54 .]       2      41 ..       1      41 [. 0.92
   2 !   35.8   0.2   3.1e-12     7e-09       1      47 [.      54     102 ..      54     106 .. 0.91
   3 !   23.9   0.0   1.7e-08   3.8e-05      22      52 ..     108     138 ..      99     140 .. 0.90
   4 !   39.9   0.0   1.6e-13   3.6e-10       1      54 []     120     173 ..     120     173 .. 0.97

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 3.9e-08
   PF13637.1 16 lvklLlek.gidinrtdesGntaLhiAalrgnieilklLl 54
                ++k L+e  g+d+n +d++   +L+ A+++g+++++k+L+
  MMETSP1325-20131115|8893_1  2 ILKKLVEEeGADVNSLDDQKCAPLIWAIRNGHKDVTKYLI 41
                688899766******************************8 PP

  == domain 2    score: 35.8 bits;  conditional E-value: 3.1e-12
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrg..ni 47 
                 g++aLh a++   ++lv  Ll++++d+n +d+ GntaLh A  rg  ni
  MMETSP1325-20131115|8893_1  54 GMRALHFACNGAKEDLVVILLDNNVDVNSQDDVGNTALHWASARGilNI 102
                 689***************************999*********9995555 PP

  == domain 3    score: 23.9 bits;  conditional E-value: 1.7e-08
   PF13637.1  22 ekgidinrtdesGntaLhiAalrgnieilkl 52 
                 +kg+d n t+++G ta+h+Aa++g++ ++k 
  MMETSP1325-20131115|8893_1 108 DKGADMNLTNKQGVTAMHKAAMFGQLAVVKR 138
                 78*************************9985 PP

  == domain 4    score: 39.9 bits;  conditional E-value: 1.6e-13
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                 g+ta+h+aa++g l +vk ++e+g ++n  d++Gnt+Lh A + g+ +i+ +Ll
  MMETSP1325-20131115|8893_1 120 GVTAMHKAAMFGQLAVVKRIIEYGGNVNTADKEGNTPLHMASKVGFGQIVTFLL 173
                 579*************************************************98 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.16   3.6e+02      16      29 ..       1      15 [.       1      16 [. 0.85
   2 !   23.1   0.0     2e-08   4.6e-05       5      28 ..      24      47 ..      21      49 .. 0.94
   3 !   13.1   0.0   3.3e-05     0.076       2      29 ..      54      81 ..      53      82 .. 0.93
   4 !    9.7   0.0   0.00042      0.95       2      29 ..      87     114 ..      86     115 .. 0.86
   5 !   18.6   0.0   5.8e-07    0.0013       2      30 .]     120     148 ..     119     148 .. 0.95
   6 !   15.7   0.0   5.1e-06     0.012       2      27 ..     153     178 ..     152     181 .. 0.94

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.16
   PF13606.1 16 elveaLlen.gadin 29
                ++++ L+e  gad+n
  MMETSP1325-20131115|8893_1  1 DILKKLVEEeGADVN 15
                78999**855****9 PP

  == domain 2    score: 23.1 bits;  conditional E-value: 2e-08
   PF13606.1  5 pLhlAasngrielveaLlengadi 28
                pL +A++ng++++ ++L+e gadi
  MMETSP1325-20131115|8893_1 24 PLIWAIRNGHKDVTKYLIEQGADI 47
                99*********************9 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 3.3e-05
   PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                G  +Lh A+   + +lv +Ll+n +d+n
  MMETSP1325-20131115|8893_1 54 GMRALHFACNGAKEDLVVILLDNNVDVN 81
                6679******99***************9 PP

  == domain 4    score: 9.7 bits;  conditional E-value: 0.00042
   PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                 GnT+Lh+A  +g ++++  L ++gad n
  MMETSP1325-20131115|8893_1  87 GNTALHWASARGILNIAIRLGDKGADMN 114
                 9********9998888888888888866 PP

  == domain 5    score: 18.6 bits;  conditional E-value: 5.8e-07
   PF13606.1   2 GnTpLhlAasngrielveaLlengadina 30 
                 G T++h Aa +g++++v+  +e+g ++n+
  MMETSP1325-20131115|8893_1 120 GVTAMHKAAMFGQLAVVKRIIEYGGNVNT 148
                 78************************995 PP

  == domain 6    score: 15.7 bits;  conditional E-value: 5.1e-06
   PF13606.1   2 GnTpLhlAasngrielveaLlengad 27 
                 GnTpLh+A + g  ++v +Ll++gad
  MMETSP1325-20131115|8893_1 153 GNTPLHMASKVGFGQIVTFLLSKGAD 178
                 9*********9999***********9 PP

>> PF03158.8  Multigene family 530 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00013       0.3      81     171 ..      59     148 ..      53     175 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00013
   PF03158.8  81 elACeerkydiikWi.gqnleiyeleaiFdiAikkkdls.LyslgyklllervqsetnedlallltqhlekaaakglleFvletlkyggsvek 171
                   AC+  k d++  + ++n++++ + ++ ++A++    + +++++ +l  +    +     +    + ++kaa  g l  v++ ++ygg+v++
  MMETSP1325-20131115|8893_1  59 HFACNGAKEDLVVILlDNNVDVNSQDDVGNTALHWASARgILNIAIRLGDKGADMN--LT-NKQGVTAMHKAAMFGQLAVVKRIIEYGGNVNT 148
                 57999999999887669999999999999999998776537777777654442222..22.22334689**********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.65
# Mc/sec: 748.40
//
Query:       MMETSP1325-20131115|8891_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-11   41.4   0.0    1.1e-10   41.2   0.0    1.1  1  PF00026.18 Eukaryotic aspartyl protease


Domain annotation for each model (and alignments):
>> PF00026.18  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0     8e-15   1.1e-10     165     313 ..       5     182 ..       1     183 [. 0.85

  Alignments for each domain:
  == domain 1    score: 41.2 bits;  conditional E-value: 8e-15
                 -EEEEEEBC......-SSS-EEEBEEEE----..EEEEEEBE....EEE-----SEEE-HHHHHHHHHHH--EETS....................SEEEETTGG-GS-EEEEETTS-EEEEEGGGGEEEC--STTS..EEEESEEETT-ST--SSEEE--TTGGGEEEEEETTTTEEEEEE CS
                 xxxxxxxxx......xxxxxxxxxxxxxxxxx..xxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00026.18 165 Gsltyvpvt......kkgywqvelesvtvgdk..tfcssgcq....ailDtGTsllalpesivekiakavgaaese...................geyvvdCsslsslpdiaftvggkkitvsaselvlkesesasa..iCilglqeldvpeegelwiLGdvFlrsaytvfdldnnrvglAe 313
                  s++++         + gyw   + +v vg+k  +f++s ++    a++DtGT+ ++lp+s++ + +++  +  +e                   +++ ++ s+l  lp +  ++ g + +v+  ++vl   +++s       g+       eg+  i+G++ l+ + tvfd +n+r+g+Ae
  MMETSP1325-20131115|8891_1   5 SSINWTTAEktttlgDYGYWLSYMVGVRVGSKsvSFSESVVNdyggALIDTGTTEIMLPTSTLGSSVSDSDTVLKEiyekydgdmssselkefleEGSCFSRSKLDGLPVLYLELSGMTLSVEHIHYVLPCYDTDSGdfADSYGFGI----AEGNPAIVGNIALNGYVTVFDKKNHRIGFAE 182
                 555555555555666999**************86555554448888*****************99999999999889999**************99999999**************************9988887654434444444....66999*************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.71
# Mc/sec: 1215.05
//
Query:       MMETSP1325-20131115|8895_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       697  (0.0509801); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1184.08
//
Query:       MMETSP1325-20131115|8897_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|8899_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-31  105.3   0.0    4.9e-24   83.3   0.1    2.0  2  PF00352.16 Transcription factor TFIID (or TATA-binding protein, TBP)
     0.0024   17.3   1.2       0.91    9.0   0.0    2.2  2  PF14128.1  Domain of unknown function (DUF4295)


Domain annotation for each model (and alignments):
>> PF00352.16  Transcription factor TFIID (or TATA-binding protein, TBP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.1   7.1e-28   4.9e-24      12      84 ..       2      74 ..       1      76 [. 0.97
   2 !   20.4   0.0   3.1e-08   0.00021       1      33 [.      82     114 ..      82     115 .] 0.92

  Alignments for each domain:
  == domain 1    score: 83.3 bits;  conditional E-value: 7.1e-28
                EEE------HHHHHHHSTTEEEETTTECSEEEEETTTTEEEEEE----EEEE---SHHHHHHHHHHHHHHHHH CS
  PF00352.16 12 sadlgveidLekiaeklenaeYepeqfpglvyrlrepkavllifssGkvvitGakseeeakkavkkiakilkk 84
                +++l+++id + +++k +naeY+p++f+++++r+repk ++lifssGk+v+ G+kse++ + a++k+ ki+k 
  MMETSP1325-20131115|8899_1  2 TVNLNCKIDQRLLTQKARNAEYNPKRFAAVIMRIREPKSTALIFSSGKIVVLGTKSEDDSRIAARKYSKIIKM 74
                899*******************************************************************986 PP

  == domain 2    score: 20.4 bits;  conditional E-value: 3.1e-08
                 S-EEEEEEEEEEEE------HHHHHHHSTTEEE CS
  PF00352.16   1 epeikieNivasadlgveidLekiaeklenaeY 33 
                 ++++ki+N+v+ a+++++i+Le +  ++ ++++
  MMETSP1325-20131115|8899_1  82 FKDFKINNMVGVAKCDFPIRLEGLVLSHAKCDF 114
                 589**********************99988865 PP

>> PF14128.1  Domain of unknown function (DUF4295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00013      0.91      13      34 ..      25      46 ..      15      54 .. 0.82
   2 !    7.3   0.3   0.00046       3.2      13      26 ..      65      78 ..      48      86 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00013
   PF14128.1 13 skkytKvIkmvKspKtgaYtFk 34
                 k+++ vI  ++ pK+ a +F 
  MMETSP1325-20131115|8899_1 25 PKRFAAVIMRIREPKSTALIFS 46
                79****************9996 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.00046
   PF14128.1 13 skkytKvIkmvKsp 26
                 +ky+K+Ikm   p
  MMETSP1325-20131115|8899_1 65 ARKYSKIIKMCEHP 78
                69********7655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|8900_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-10   38.5   0.0      9e-10   37.8   0.0    1.3  1  PF00916.15 Sulfate transporter family
     0.0014   17.1   0.2     0.0014   17.1   0.1    1.1  1  PF00860.15 Permease family
  ------ inclusion threshold ------
      0.045   13.1   0.1      0.051   12.9   0.1    1.1  1  PF07895.6  Protein of unknown function (DUF1673)


Domain annotation for each model (and alignments):
>> PF00916.15  Sulfate transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0     2e-13     9e-10       2      40 ..      52      90 ..      51      97 .. 0.91

  Alignments for each domain:
  == domain 1    score: 37.8 bits;  conditional E-value: 2e-13
  PF00916.15  2 GllRlgflveflsravisGfmaGaailillsQlkkllgl 40
                G+++l++lv+++++++++Gfm+G+ai+i+++Q+ ++ + 
  MMETSP1325-20131115|8900_1 52 GFVQLAKLVRLIPQPAMLGFMNGLAIVIFWAQIGAFKEC 90
                99*******************************988765 PP

>> PF00860.15  Permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1     3e-07    0.0014      88     139 ..      33      85 ..       2      94 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 3e-07
                 T----TT---HHHHHHHHHHT----.-HHHH--TTT---HH..HH--------- CS
  PF00860.15  88 alagllgallvagvlfilisltglrgrlarlipPvvtgpvv..lliGlslaqia 139
                   + ll+++l+ g+l++l +++ l  +l+rlip   + +++  l i+++ aqi+
  MMETSP1325-20131115|8900_1  33 RFEQLLMCVLLTGLLQMLCGFVQLA-KLVRLIPQPAMLGFMngLAIVIFWAQIG 85 
                 567899******************6.*******999998882344555666665 PP

>> PF07895.6  Protein of unknown function (DUF1673)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.1e-05     0.051     123     171 ..      32      82 ..      13      87 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.1e-05
   PF07895.6 123 kl.vrlllliilllillllflevilgevlsllsaqallslisgllll.mwl 171
                 ++  +ll+ ++l  +l +l   v l ++++l+ + a+l ++ gl ++ +w 
  MMETSP1325-20131115|8900_1  32 QRfEQLLMCVLLTGLLQMLCGFVQLAKLVRLIPQPAMLGFMNGLAIViFWA 82 
                 332455666666666666666688999*******************97775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|8902_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.039   13.3   0.8      0.063   12.6   0.6    1.3  1  PF06945.8 Protein of unknown function (DUF1289)


Domain annotation for each model (and alignments):
>> PF06945.8  Protein of unknown function (DUF1289)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.6   4.6e-06     0.063      23      43 ..      54      74 ..      53      75 .] 0.93

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.6e-06
   PF06945.8 23 tldEiaaWssmsdeerravla 43
                t +Eia W++++++++++ ++
  MMETSP1325-20131115|8902_1 54 TKEEIATWKAATEAKKEKTMN 74
                789**************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       800  (0.0585138); expected 273.4 (0.02)
Passed bias filter:                      524  (0.0383265); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|8901_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.5   0.1       0.09   12.2   0.0    1.2  1  PF01429.14 Methyl-CpG binding domain


Domain annotation for each model (and alignments):
>> PF01429.14  Methyl-CpG binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.6e-06      0.09       9      30 ..      11      30 ..       6      56 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6.6e-06
  PF01429.14  9 svLpkGWrreevqrksGssagk 30
                ++Lp+GW++++v r  + ++  
  MMETSP1325-20131115|8901_1 11 PPLPEGWKKKFV-RVVNAKN-G 30
                79**********.8887664.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 415.69
//
Query:       MMETSP1325-20131115|8905_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.60
# Mc/sec: 211.68
//
Query:       MMETSP1325-20131115|8904_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   14.7   0.0       0.03   14.2   0.0    1.4  1  PF08448.5 PAS fold


Domain annotation for each model (and alignments):
>> PF08448.5  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.2e-06      0.03       4      67 ..      42     106 ..      39     145 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2.2e-06
   PF08448.5   4 lpdalavldpdgrvlyaNaaaaelfgappeellGktla..ellpeedaarleralrrvlegeepie 67 
                 + + l+vld+++r++ +++ +a+ +   +e +lG ++    + ++e++ r   al+ ++++  + +
  MMETSP1325-20131115|8904_1  42 SKAQLFVLDAELRIVLWSRGMAK-ALEGFEPVLGTSVSllPFTSDEHRSRAVVALTTAMSESGARS 106
                 566799**************999.666666666666665599999999999999999999854444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 728.30
//
Query:       MMETSP1325-20131115|8907_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.61
# Mc/sec: 644.27
//
Query:       MMETSP1325-20131115|8909_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 310.35
//
Query:       MMETSP1325-20131115|8910_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 538.05
//
Query:       MMETSP1325-20131115|8903_1  [L=595]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0049   17.3   0.0       0.08   13.4   0.0    3.0  3  PF01448.19 ELM2 domain
     0.0076   15.7   0.0      0.015   14.7   0.0    1.6  1  PF02671.16 Paired amphipathic helix repeat


Domain annotation for each model (and alignments):
>> PF01448.19  ELM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   1.2e-05      0.08       1      14 [.      52      65 ..      52      72 .. 0.92
   2 ?   -2.1   0.0      0.83   5.7e+03       5      16 ..     287     298 ..     287     304 .. 0.86
   3 ?   -1.3   0.0      0.44     3e+03      10      23 ..     489     502 ..     489     508 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.2e-05
  PF01448.19  1 IrVGskYQAkIPel 14
                +rVG ++QA IP+l
  MMETSP1325-20131115|8903_1 52 SRVGDDFQASIPPL 65
                59***********9 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.83
  PF01448.19   5 skYQAkIPelgs 16 
                 s++Q ++Pel+s
  MMETSP1325-20131115|8903_1 287 SRHQDDLPELQS 298
                 689999***997 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.44
  PF01448.19  10 kIPelgseseqeqd 23 
                 +IP+l ses++  +
  MMETSP1325-20131115|8903_1 489 DIPDLVSESHEVLQ 502
                 6******9987655 PP

>> PF02671.16  Paired amphipathic helix repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   2.2e-06     0.015       3      47 .]     472     516 ..     470     516 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.2e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-HHHHHH----S- CS
  PF02671.16   3 kYqeFLeiLhdyskeiisrtelyqeVadLlgghpdLleeFnqFLp 47 
                 k+ + ++ L  y k+ +++ +l++e  + l+ h++L+  F  FLp
  MMETSP1325-20131115|8903_1 472 KFTKLIRALVAYDKGTKDIPDLVSESHEVLQPHQELIGAFHKFLP 516
                 66677778889*********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       624  (0.0456407); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.92u 0.35s 00:00:01.27 Elapsed: 00:00:00.60
# Mc/sec: 2376.39
//
Query:       MMETSP1325-20131115|8911_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 531.37
//
Query:       MMETSP1325-20131115|8912_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-06   27.3   0.0    1.5e-06   27.2   0.0    1.0  1  PF01120.12 Alpha-L-fucosidase


Domain annotation for each model (and alignments):
>> PF01120.12  Alpha-L-fucosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0   1.1e-10   1.5e-06     136     240 ..      23     124 ..       9     138 .. 0.73

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 1.1e-10
                 T-S-----HHHHHHH---EEEEEEESS-TT-TT--SS--SHHHH.....HHHHHHHH.HHHHHHHHHHHHS.TEEEEEEE---SHHT---HHHHHHHHHHHH---- CS
  PF01120.12 136 pkrDivkelakavrkeglklglyyslldwhnpdykadkkekkkkkedkkekwekyvkeftlnqlkelvtkY.kpdilwfDgeweakdeewklaellnllrelqpev 240
                 +  ++++e+++++r+ g+  g+yysl + +  +++ +  ++ +  + + + ++  +++  l +++el t++ ++  +wfDg++  +d e+    + +ll+e+qp +
  MMETSP1325-20131115|8912_1  23 YSGNLLEEFVDSMRRAGIGHGFYYSLTNNFYLNVQGHFVQNSTLLPGQVKVTQDEFEAIALGHVTELWTRFgNLTEIWFDGGYT-SDMEVA---ITELLQEHQPYA 124
                 566899********************96555555554444444445556666677888***********************997.333333...334444555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 679.78
//
Query:       MMETSP1325-20131115|8913_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-10   38.8   0.2    1.5e-05   24.4   0.0    2.2  2  PF00023.25 Ankyrin repeat
    9.3e-07   29.0   0.0    1.4e-06   28.5   0.0    1.3  1  PF13637.1  Ankyrin repeats (many copies)
    2.3e-06   27.7   0.1    5.3e-06   26.5   0.1    1.6  1  PF12796.2  Ankyrin repeats (3 copies)
    5.2e-06   26.0   0.1      0.044   13.9   0.0    2.2  2  PF13606.1  Ankyrin repeat
    1.9e-05   24.5   0.4     0.0016   18.4   0.1    2.1  2  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   5.3e-09   1.5e-05       3      32 ..       2      34 ..       1      35 [. 0.96
   2 !   12.7   0.0   2.7e-05     0.074       2      12 ..      37      47 ..      36      54 .. 0.87

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 5.3e-09
                CBHHHHHHHTT...HHHHHHHHHHTTSSTTHBH CS
  PF00023.25  3 fTPLHlAalrg...nlevvklLlsqGAdlnaqd 32
                +TPLH+++l+g   +  +++ Ll+ GAd n+ +
  MMETSP1325-20131115|8913_1  2 WTPLHWCCLYGgekRRLIATALLDEGADANMPT 34
                7****************************9876 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 2.7e-05
                SCBHHHHHHHT CS
  PF00023.25  2 GfTPLHlAalr 12
                G+TPLH+Aa+ 
  MMETSP1325-20131115|8913_1 37 GRTPLHVAAMA 47
                9********85 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0     5e-10   1.4e-06       2      44 ..       2      47 ..       1      53 [. 0.85

  Alignments for each domain:
  == domain 1    score: 28.5 bits;  conditional E-value: 5e-10
   PF13637.1  2 ltaLhyaai...sgrlelvklLlekgidinrtdesGntaLhiAalr 44
                +t+Lh+++      r  ++  Ll+ g+d n+   +G+t+Lh+Aa++
  MMETSP1325-20131115|8913_1  2 WTPLHWCCLyggEKRRLIATALLDEGADANMPTLQGRTPLHVAAMA 47
                89*******6655555558899999*******************86 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1     2e-09   5.3e-06      28      69 ..       3      47 ..       1      53 [. 0.85

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 2e-09
   PF12796.2 28 tpLhlAaeagn...leivklLleagadvnakdkegntpLhlAvrn 69
                tpLh+++ +g      i+ +Ll+ gad n  + +g+tpLh+A+++
  MMETSP1325-20131115|8913_1  3 TPLHWCCLYGGekrRLIATALLDEGADANMPTLQGRTPLHVAAMA 47
                79**999776511156**************************986 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   1.6e-05     0.044       3      29 ..       2      31 ..       1      32 [. 0.83
   2 !   10.4   0.0   0.00021      0.58       2      12 ..      37      47 ..      36      53 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.6e-05
   PF13606.1  3 nTpLhlAasng...rielveaLlengadin 29
                +TpLh+ + +g   r  ++ aLl+ gad n
  MMETSP1325-20131115|8913_1  2 WTPLHWCCLYGgekRRLIATALLDEGADAN 31
                8*********955344589*********98 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00021
   PF13606.1  2 GnTpLhlAasn 12
                G+TpLh+Aa  
  MMETSP1325-20131115|8913_1 37 GRTPLHVAAMA 47
                9*******974 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.013        36      18      27 ..       3      12 ..       1      13 [. 0.89
   2 !   18.4   0.1   5.9e-07    0.0016       1      26 [.      23      47 ..      23      51 .. 0.92

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.013
   PF13857.1 18 tpLhlAakgg 27
                tpLh+ + +g
  MMETSP1325-20131115|8913_1  3 TPLHWCCLYG 12
                9******987 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 5.9e-07
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakg 26
                Ll++g ad+n   ++g+tpLh+Aa++
  MMETSP1325-20131115|8913_1 23 LLDEG-ADANMPTLQGRTPLHVAAMA 47
                89***.******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 391.24
//
Query:       MMETSP1325-20131115|8915_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.23   11.7   6.1       0.24   11.7   4.2    1.2  1  PF00428.14 60s Acidic ribosomal protein
          2    8.9   7.6        1.9    9.0   5.3    1.1  1  PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
        5.2    6.9   5.6        4.5    7.1   3.9    1.1  1  PF02084.10 Bindin


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.2   5.2e-05      0.24      68      81 ..       5      18 ..       2      29 .. 0.53

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5.2e-05
  PF00428.14 68 eekkeeeeeEeedd 81
                +e++eeeeeEeed+
  MMETSP1325-20131115|8915_1  5 AEEEEEEEEEEEDA 18
                33333333234443 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   5.3   0.00041       1.9       5      18 ..       4      17 ..       2      34 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00041
   PF11942.3  5 EAevddeeeEeeee 18
                EAe+++eeeEeee+
  MMETSP1325-20131115|8915_1  4 EAEEEEEEEEEEED 17
                55555555555432 PP

>> PF02084.10  Bindin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.9   0.00098       4.5     161     179 ..       8      26 ..       2      35 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00098
  PF02084.10 161 qEeEeEEeqDAangvrdnv 179
                  EeEeEEe+DA ++  d v
  MMETSP1325-20131115|8915_1   8 EEEEEEEEEDALAALWDAV 26 
                 478889999**99987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       574  (0.0419836); expected 273.4 (0.02)
Passed bias filter:                      488  (0.0356934); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 169.15
//
Query:       MMETSP1325-20131115|8914_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-22   78.1  13.9    4.5e-22   78.1   9.6    1.6  2  PF03357.16 Snf7
    0.00071   18.9   5.0     0.0012   18.1   3.4    1.4  1  PF03398.9  Regulator of Vps4 activity in the MVB pathway
  ------ inclusion threshold ------
      0.063   12.9   0.6       0.14   11.8   0.4    1.6  1  PF08653.5  DASH complex subunit Dam1
       0.11   12.2   4.0        1.5    8.5   0.6    2.2  2  PF03507.8  CagA exotoxin
       0.12   12.2   2.2       0.22   11.4   1.5    1.4  1  PF08590.5  Domain of unknown function (DUF1771)
       0.18   11.4   8.3        1.1    8.9   3.2    2.2  2  PF11728.3  DUF939 C-terminal domain
       0.22   10.9   4.9       0.54    9.6   3.4    1.8  1  PF01025.14 GrpE
       0.33   10.8   7.5      0.054   13.3   1.8    2.1  2  PF06013.7  Proteins of 100 residues with WXG
        1.2    9.4  11.5       0.87    9.9   2.9    2.7  2  PF07361.6  Cytochrome b562
        1.3    7.7   4.6        1.6    7.5   3.2    1.2  1  PF12698.2  ABC-2 family transporter protein
        3.6    7.6  11.8          1    9.3   0.4    2.2  2  PF08702.5  Fibrinogen alpha/beta chain family
          8    6.4  10.3       0.82    9.6   2.1    2.3  2  PF14071.1  Putative coat protein


Domain annotation for each model (and alignments):
>> PF03357.16  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   9.6     4e-25   4.5e-22      10     166 ..       3     159 ..       1     164 [. 0.94
   2 ?   -1.1   0.1      0.85   9.7e+02     135     149 ..     176     190 ..     168     192 .] 0.78

  Alignments for each domain:
  == domain 1    score: 78.1 bits;  conditional E-value: 4e-25
  PF03357.16  10 erelekkqeslekkikkleaelkklakkgnkdrAlllLkqkkryekqldqldgqlanleqvalaienaksnkevlnamkqgakamkamnkkmdidkidklmdeiedqmekadeisealsrsldda..deedEeeldaeLdaLeqelgdeelesvelpsv 166
                  r++   +++  kk+k+  +++kk++++gn + A++++ + +r ++q  ++ + ++++++va ++e+a +++++ ++mk++++ m ++ + m+++ki  +m  +e+q+e+++ i +++s+++++   ++  +e++d ++ ++++e++ e   +++l +v
  MMETSP1325-20131115|8914_1   3 SRQMTSASKKSSKKEKEALSKVKKAIQQGNTEGARIYAQNAIREKNQQLSYLRLSSRIDAVAARLETAIQTQQISKSMKGVVQGMGQALQSMNVEKISATMTAFEQQFEDMEVITDTISDTMNTStsSATPQEDVDSLIKMVADENQLEL--GATLDDV 159
                 567777888889999999999******************************************************************************************************999999****************99988..8888776 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.85
  PF03357.16 135 deedEeeldaeLdaL 149
                 +++ E++l a L+aL
  MMETSP1325-20131115|8914_1 176 EANGEDDLAARLEAL 190
                 67789*******998 PP

>> PF03398.9  Regulator of Vps4 activity in the MVB pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   3.4   1.1e-06    0.0012      10     164 ..       5     151 ..       1     152 [. 0.78

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 1.1e-06
   PF03398.9  10 RlkllqnkkealvkqarrevaqlLelgkeesAriRveqvireditlelleilelycelllarvsllekskecpeelkeAvasiiyAaprltevkELqeirkllvekyGkefaeaavenreegVnekvvekLsvktpseelvekylkeIAkeynve 164
                 ++  + +k +++ k+a + v + +++g++e Ari +++ ire+++   +  l+  ++ ++ar+++  +++++ +++k  v+++  A + + +v   ++i++ +++ + ++f  + v   + ++++++ +  s  tp +e v+ ++k +A e+++e
  MMETSP1325-20131115|8914_1   5 QMTSASKKSSKKEKEALSKVKKAIQQGNTEGARIYAQNAIREKNQQLSYLRLSSRIDAVAARLETAIQTQQISKSMKGVVQGMGQALQSM-NV---EKISATMTA-FEQQFEDMEVI--TDTISDTMNTSTSSATP-QEDVDSLIKMVADENQLE 151
                 45566788999999***************************************************9999999999999998888888884.55...555555443.55555333333..45677777777766555.456788888888888765 PP

>> PF08653.5  DASH complex subunit Dam1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   0.00012      0.14       6      40 ..      95     130 ..      89     131 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00012
   PF08653.5   6 klaeLaDsmeeLdanltdLqaihesLsd.fnEsfas 40 
                 ++++++  m +++++++d+++i + +sd +n s +s
  MMETSP1325-20131115|8914_1  95 NVEKISATMTAFEQQFEDMEVITDTISDtMNTSTSS 130
                 6789999*********************99998776 PP

>> PF03507.8  CagA exotoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.6    0.0013       1.5      37     111 ..      25     107 ..       8     112 .. 0.71
   2 ?    5.5   0.1     0.011        13      62     115 ..     111     164 ..     104     191 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0013
   PF03507.8  37 kkagqvaspe.epiyaqvakkvkak.i......drlnqiasglgdvgqaagfllkrhdkvddlskvGlsaspepiyatiddlg 111
                 kka q    e   iyaq a + k + +       r++ +a+ l++ +q+ +   + ++ v+++ ++ +s++ e i at+   +
  MMETSP1325-20131115|8914_1  25 KKAIQQGNTEgARIYAQNAIREKNQqLsylrlsSRIDAVAARLETAIQTQQISKSMKGVVQGMGQALQSMNVEKISATMTAFE 107
                 45555444441679999885544321212222257889999999999999999999999*******************97655 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.011
   PF03507.8  62 drlnqiasglgdvgqaagfllkrhdkvddlskvGlsaspepiyatiddlggpfp 115
                 + ++ i+ +++d +++ +  +  +++vd l k+    ++  + at+dd+g+   
  MMETSP1325-20131115|8914_1 111 EDMEVITDTISDTMNTSTSSATPQEDVDSLIKMVADENQLELGATLDDVGSVGT 164
                 5678899999999999999*****************************996544 PP

>> PF08590.5  Domain of unknown function (DUF1771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.5   0.00019      0.22      10      48 ..      11      49 ..       7      59 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00019
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------- CS
   PF08590.5 10 dehgkkraelfqkAaeAyrrGdkaaAkeLseegkkhgek 48
                ++  kk +e+++k ++A ++G+++ A+ + + + + +++
  MMETSP1325-20131115|8914_1 11 KKSSKKEKEALSKVKKAIQQGNTEGARIYAQNAIREKNQ 49
                6778999***********************999877766 PP

>> PF11728.3  DUF939 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.2   0.00095       1.1      28     131 ..      10     108 ..       3     113 .. 0.72
   2 ?    5.2   0.6     0.013        15      78     139 ..      92     153 ..      89     158 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00095
   PF11728.3  28 regeeekegkeleeleellkkakklayrdveNhllreenyyvhYfemReeQleiLkrmlelleslsltveqaeiiadlleeiaeslseentaeelleeleelre 131
                  +++++ke++ l+++++ ++++++   r    + +re+n++++Y+++  +    +  ++  le+   t++ ++ +  +++ ++++l++ n +e++ + ++ +++
  MMETSP1325-20131115|8914_1  10 SKKSSKKEKEALSKVKKAIQQGNTEGARIYAQNAIREKNQQLSYLRLSSR----IDAVAARLETAIQTQQISKSMKGVVQGMGQALQSMN-VEKISATMTAFEQ 108
                 4556669999***************9999999999**********99766....566666666666666666666667777777776655.3444455555555 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.013
   PF11728.3  78 QleiLkrmlelleslsltveqaeiiadlleeiaeslseentaeelleeleelreefrespLP 139
                 Q+  ++++  +++ ++ + e  e+i d ++++ ++ +++ t +e +++l ++  + ++ +L 
  MMETSP1325-20131115|8914_1  92 QSMNVEKISATMTAFEQQFEDMEVITDTISDTMNTSTSSATPQEDVDSLIKMVADENQLELG 153
                 6667889999999999999**********999999999999999999999999888888775 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.4   0.00048      0.54      46     136 ..      40     123 ..       2     135 .. 0.57

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00048
  PF01025.14  46 rkrtekekeeakkyaiekflkelLpvlDnleralkaakeseeveslleGvemtlkqllkvLekegvekiepegekFDpnl..heAvstvesde 136
                  +++ +ek+++           l   +D++   l+   ++ +++++ + ++ + + + ++L++ +veki+++  +F  ++  +e++  + sd 
  MMETSP1325-20131115|8914_1  40 AQNAIREKNQQL------SYLRLSSRIDAVAARLE---TAIQTQQISKSMKGVVQGMGQALQSMNVEKISATMTAFEQQFedMEVITDTISDT 123
                 222222222222......23334444444444444...34556799999***************************99762256666655555 PP

>> PF06013.7  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1       1.1   1.2e+03       7      29 ..       4      26 ..       1      37 [. 0.56
   2 ?   13.3   1.8   4.7e-05     0.054       9      79 ..      60     129 ..      57     136 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 1.1
   PF06013.7  7 eelrqaakrfqkaaeelesilqr 29
                 ++ +a+k+ +k+++e+ s++++
  MMETSP1325-20131115|8914_1  4 RQMTSASKKSSKKEKEALSKVKK 26
                55666666666555555444443 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 4.7e-05
   PF06013.7   9 lrqaakrfqkaaeelesilqrlkaqidalqsgWsGaaadafqaafeewkqaaeklveaLeeisealkqaae 79 
                 ++++a+r+++ a + ++i +++k+ ++ ++++ +    ++  a+++ + q++e+++   ++is++++++++
  MMETSP1325-20131115|8914_1  60 IDAVAARLET-AIQTQQISKSMKGVVQGMGQALQSMNVEKISATMTAFEQQFEDMEVITDTISDTMNTSTS 129
                 6666666654.556799*************************************************99876 PP

>> PF07361.6  Cytochrome b562
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.5     0.086        98      67      89 ..      19      41 ..       2      52 .. 0.73
   2 ?    9.9   2.9   0.00076      0.87       2      74 ..      75     149 ..      74     159 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.086
   PF07361.6 67 deidkaealakagkleeAkqalk 89
                ++++k+++++++g+ e A+  ++
  MMETSP1325-20131115|8914_1 19 EALSKVKKAIQQGNTEGARIYAQ 41
                56778888888888888876665 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00076
   PF07361.6   2 dlkeeMkqmklnykqaakaddaeelkealnklrsaaedakkkk..ppkleedseemkdYqeGldklideidkaea 74 
                 +++++Mk + + + qa++++++e++++ ++ ++++ ed +  +   ++  + s    + qe  d li+++ + ++
  MMETSP1325-20131115|8914_1  75 QISKSMKGVVQGMGQALQSMNVEKISATMTAFEQQFEDMEVITdtISDTMNTSTSSATPQEDVDSLIKMVADENQ 149
                 6899*******************************9998765532333333577788888888888888876655 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.2    0.0014       1.6      45     141 ..       3     105 ..       1     161 [. 0.60

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0014
   PF12698.2  45 skqlvealeasptvkikevdseeeakkalkngkidgilvipknfskdllssgesasitvyingsnlnss.ksilnalnsllqqlnasska...............sstaqssa 141
                 s+q+++a ++s++   ke + +++ kka+++g+++g+ +  +n ++  +     ++++++  +s  +++   +++a+++  qq+ +s+k+               +++a+ +a
  MMETSP1325-20131115|8914_1   3 SRQMTSASKKSSK---KEKEALSKVKKAIQQGNTEGARIYAQNAIREKN-----QQLSYLRLSSRIDAVaARLETAIQT--QQISKSMKGvvqgmgqalqsmnveKISATMTA 105
                 7777777777665...37999*****************99999997655.....4444444444443332355555554..44444444443222222222222322222222 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   3.3     0.091     1e+02      62     131 ..      10      75 ..       1      78 [. 0.56
   2 ?    9.3   0.4   0.00089         1      36      81 ..      94     139 ..      79     153 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.091
                 HHHHHHCCCHCHCCHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF08702.5  62 ikeslkekqkqakdndniesavskslekki....ililekkilaqesqirvLqevlrsneskiqrLeqdiaqke 131
                  k+s k++++     +++++a+++           ++ ++ i ++++q+++L+   r       rLe++i++++
  MMETSP1325-20131115|8914_1  10 SKKSSKKEKE---ALSKVKKAIQQG----NtegaRIYAQNAIREKNQQLSYLRLSSR-IDAVAARLETAIQTQQ 75 
                 2222222222...222333333333....2233355788999999*******96654.5566689999998875 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00089
                 HHHCCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHH CS
   PF08702.5  36 kkieklenlLeqlanktkeieelvksikeslkekqkqakdndnies 81 
                  ++ek+  +++ ++++ +++e ++ +i+++++   ++a +++ ++s
  MMETSP1325-20131115|8914_1  94 MNVEKISATMTAFEQQFEDMEVITDTISDTMNTSTSSATPQEDVDS 139
                 579************************************9988765 PP

>> PF14071.1  Putative coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.5      0.36   4.1e+02      53      79 ..       7      33 ..       2      55 .. 0.69
   2 ?    9.6   2.1   0.00072      0.82      55     111 ..      72     128 ..      62     140 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.36
   PF14071.1 53 eseekeeeeekndlleklvelvkkldv 79
                +s++k++++++++ l+k+ +++++ ++
  MMETSP1325-20131115|8914_1  7 TSASKKSSKKEKEALSKVKKAIQQGNT 33
                455566667777777777777776555 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00072
   PF14071.1  55 eekeeeeekndlleklvelvkkldvnelqehlnklsqaissvqellqqfqeekekks 111
                 ++++ +++ + +++ + ++++ ++v++++  ++ ++q  + ++ + ++++++ ++++
  MMETSP1325-20131115|8914_1  72 QTQQISKSMKGVVQGMGQALQSMNVEKISATMTAFEQQFEDMEVITDTISDTMNTST 128
                 445557788899**************************9999988888888777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1699  (0.124269); expected 273.4 (0.02)
Passed bias filter:                      747  (0.0546372); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.49
# Mc/sec: 938.98
//
Query:       MMETSP1325-20131115|8918_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-08   33.4   0.0    5.7e-08   33.2   0.0    1.1  1  PF12847.2  Methyltransferase domain
    9.3e-07   28.4   0.0    1.2e-06   28.0   0.0    1.1  1  PF13847.1  Methyltransferase domain
    8.4e-06   26.0   0.0    9.7e-06   25.8   0.0    1.1  1  PF08241.7  Methyltransferase domain
    1.4e-05   25.3   0.0    1.7e-05   25.1   0.0    1.2  1  PF08242.7  Methyltransferase domain
     0.0001   22.2   0.0    0.00012   21.9   0.0    1.1  1  PF13659.1  Methyltransferase domain
    0.00015   21.9   0.1    0.00019   21.6   0.0    1.2  1  PF13649.1  Methyltransferase domain
    0.00039   20.0   0.0    0.00041   19.9   0.0    1.1  1  PF13489.1  Methyltransferase domain
      0.001   18.3   0.0     0.0011   18.2   0.0    1.1  1  PF05175.9  Methyltransferase small domain
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.013   14.9   0.0    1.0  1  PF01135.14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
      0.057   12.4   0.0      0.062   12.3   0.0    1.0  1  PF06325.8  Ribosomal protein L11 methyltransferase (PrmA)
      0.088   11.7   0.0      0.094   11.6   0.0    1.1  1  PF01209.13 ubiE/COQ5 methyltransferase family
       0.13   11.5   0.1       0.15   11.3   0.0    1.1  1  PF07021.7  Methionine biosynthesis protein MetW


Domain annotation for each model (and alignments):
>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0     5e-11   5.7e-08       4      45 ..      22      61 ..      20      81 .. 0.87

  Alignments for each domain:
  == domain 1    score: 33.2 bits;  conditional E-value: 5e-11
   PF12847.2  4 rilDlGcGtGslslelarlrpgakvvgvDpseeslelarena 45
                r lDlGcGtG+++++l +    + + gvD+s+++++ are++
  MMETSP1325-20131115|8918_1 22 RCLDLGCGTGLSGVVLRS--LSGYLEGVDISPAMVQKARERT 61
                679***************..899999*************998 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0     1e-09   1.2e-06       6      48 ..      22      61 ..      20      67 .. 0.90

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 1e-09
   PF13847.1  6 kvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkera 48
                + lDlGCGtG  +  l ++   ++ + G+Dis+ ++++A+er+
  MMETSP1325-20131115|8918_1 22 RCLDLGCGTGLSGVVLRSL---SGYLEGVDISPAMVQKARERT 61
                579**************77...77899*************985 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   8.6e-09   9.7e-06       1      41 [.      24      63 ..      24      80 .. 0.91

  Alignments for each domain:
  == domain 1    score: 25.8 bits;  conditional E-value: 8.6e-09
   PF08241.7  1 LdvGcGtglllealaerpaarvtgvDlseemlatakerlke 41
                Ld+GcGtgl    l++  ++ + gvD+s++m+++a+er   
  MMETSP1325-20131115|8918_1 24 LDLGCGTGLSGVVLRSL-SGYLEGVDISPAMVQKARERTIY 63
                8****************.******************99765 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   1.5e-08   1.7e-05       1      42 [.      24      63 ..      24      82 .. 0.80

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 1.5e-08
   PF08242.7  1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklak 42
                L++GcGtG    +l+     + y+ gvDisp+++++a+e++  
  MMETSP1325-20131115|8918_1 24 LDLGCGTGLSGVVLRSL---SGYLeGVDISPAMVQKARERTIY 63
                8*******777777777...77777************999765 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   1.1e-07   0.00012       3      42 ..      22      60 ..      20      82 .. 0.82

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1.1e-07
   PF13659.1  3 rvldpgcGsGtfllaalellaalllgvEldpraaalaarn 42
                r+ld+gcG+G   +++  l    l gv+++p+ ++ a+++
  MMETSP1325-20131115|8918_1 22 RCLDLGCGTGLSGVVLRSLS-GYLEGVDISPAMVQKARER 60
                99***********9888887.****************965 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.6e-07   0.00019       2      44 ..      24      61 ..      23      79 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 1.6e-07
   PF13649.1  2 ldlGCGsGrviraltraldkgpeqrvigvDiseealelakerl 44
                ldlGCG+G ++  l        + ++ gvDis+ ++++a+er+
  MMETSP1325-20131115|8918_1 24 LDLGCGTGLSGVVLRSL-----SGYLEGVDISPAMVQKARERT 61
                9*******999999744.....48****************987 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.6e-07   0.00041      24      60 ..      21      60 ..       7      80 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 3.6e-07
   PF13489.1 24 grvLDiGcGtGillellaengfdvtgvDpspaaigk...a 60
                 r+LD+GcGtG    +l+    +++gvD+spa+++k   +
  MMETSP1325-20131115|8918_1 21 SRCLDLGCGTGLSGVVLRSLSGYLEGVDISPAMVQKareR 60
                59*********988888888889**********9985540 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0     1e-06    0.0011      34      75 ..      22      61 ..      16      78 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 1e-06
                ---B-------HHHHHHHH-TT----EEESBHHHHHHHHHHH CS
   PF05175.9 34 kvlDlGcGaGvlgaalakespelevtlvDinarAvesakanl 75
                + lDlGcG+G+ g++l + s    ++ vDi+ + v+ a++  
  MMETSP1325-20131115|8918_1 22 RCLDLGCGTGLSGVVLRSLSGY--LEGVDISPAMVQKARERT 61
                58****************9999..9*********99998754 PP

>> PF01135.14  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.1e-05     0.013      75     133 ..      21      82 ..      17      83 .] 0.83

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.1e-05
                 -EEEEE------HHHHHHTTSSEEE...EE-SB---HHHHHHHHHHTT--......SEEEE---- CS
  PF01135.14  75 arvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle......nvivvvgDG 133
                 +r L++G+G+G   +vl  l g      +++ ++ +v++a+++   ++l        v  +vgDG
  MMETSP1325-20131115|8918_1  21 SRCLDLGCGTGLSGVVLRSLSGYLE---GVDISPAMVQKARERTIYDHLCdgelvaTVRERVGDG 82 
                 699***************9988776...9***********9887666665577777778888888 PP

>> PF06325.8  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   5.4e-05     0.062     164     209 ..      22      66 ..      15      81 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.4e-05
   PF06325.8 164 evlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkv 209
                 + lD+G+G+G+  ++   L      +vDi +  v+ a+e   + ++
  MMETSP1325-20131115|8918_1  22 RCLDLGCGTGLSGVVLRSLS-GYLEGVDISPAMVQKARERTIYDHL 66 
                 689*******9988888885.6899************997766665 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   8.3e-05     0.094      49      94 ..      21      63 ..      11      79 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.3e-05
  PF01209.13 49 akvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklke 94
                ++ lD+ +Gtg   + l +    +g ++++Di++ m++ ++++   
  MMETSP1325-20131115|8918_1 21 SRCLDLGCGTGLSGVVLRSL---SGYLEGVDISPAMVQKARERTIY 63
                679********888877654...789***************99765 PP

>> PF07021.7  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00013      0.15      14      58 ..      20      63 ..      16      76 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00013
   PF07021.7 14 gsrvldlGcGdGellellkeekqvdgrGleldeegvaecvakGls 58
                 sr ldlGcG G    +l+       +G++++ + v+++ ++ ++
  MMETSP1325-20131115|8918_1 20 WSRCLDLGCGTGLSGVVLRS-LSGYLEGVDISPAMVQKARERTIY 63
                59*********988888866.333457999999999999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 390.00
//
Query:       MMETSP1325-20131115|8917_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        7.1    4.4   6.9        6.5    4.5   2.7    1.8  2  PF02724.9 CDC45-like protein


Domain annotation for each model (and alignments):
>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   2.7   0.00048       6.5     137     189 ..      37      95 ..      17     110 .. 0.44
   2 ?    0.9   0.0    0.0059        81      97     155 ..     123     177 ..     113     201 .. 0.52

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.00048
   PF02724.9 137 edsdseddeeeeessasekrk.sesdedeeddddeededeeqrkrsnessl.....aks 189
                 ed++++ +  +++++a+ kr  ++ +e+ e+++ ee ++ee+ +r +e+++     a++
  MMETSP1325-20131115|8917_1  37 EDEEENAELTSPPTKAEPKRApAKASEEAEGEEGEELDSEEEAERAEEDRRkkaaaARA 95 
                 22333333334444444444312222222333333333333333333322211111222 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.0059
   PF02724.9  97 dqvivfddgdieeelekeeeerdayealvemkeeeeeesdedsdseddeeeeessasek 155
                 d+v+ f++ +i  e+++ ++ ++a+ +  +   + e    e      +++   +s+s+k
  MMETSP1325-20131115|8917_1 123 DEVVTFKKPKISAEVQRPPAADRAAADAAKAAARAE----EAARAAASAKAIAASKSTK 177
                 678899999999999999888887666644332222....1111111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1209  (0.0884289); expected 273.4 (0.02)
Passed bias filter:                      557  (0.0407402); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.40s 00:00:01.08 Elapsed: 00:00:00.61
# Mc/sec: 828.90
//
Query:       MMETSP1325-20131115|8920_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1391.57
//
Query:       MMETSP1325-20131115|8923_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.067   13.0   0.0      0.088   12.6   0.0    1.2  1  PF05301.6 Touch receptor neuron protein Mec-17


Domain annotation for each model (and alignments):
>> PF05301.6  Touch receptor neuron protein Mec-17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   6.5e-06     0.088      17      36 ..      78      97 ..      65      99 .] 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.5e-06
   PF05301.6 17 ksallGllkvGtkkLfllDe 36
                 +++lG++kvGtk+L+ + +
  MMETSP1325-20131115|8923_1 78 GTHVLGFIKVGTKHLYYYAK 97
                4689************8865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|8921_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1107  (0.0809684); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1023.44
//
Query:       MMETSP1325-20131115|8922_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-12   44.4  11.8    0.00036   19.9   0.7    5.1  3  PF12799.2  Leucine Rich repeats (2 copies)
    5.8e-07   29.0  12.7    6.8e-05   22.4   1.0    3.2  3  PF13855.1  Leucine rich repeat
    4.7e-05   22.7   9.7       0.38   10.8   0.1    5.1  5  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.018   15.0  16.6          1    9.7   0.1    6.2  7  PF13504.1  Leucine rich repeat
       0.12   12.4  13.7       0.66   10.1   0.2    5.0  6  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   1.9     1e-05     0.028       8      36 ..      62      88 ..       5      98 .. 0.88
   2 !   11.4   0.0   6.2e-05      0.17       3      32 ..     102     132 ..     100     134 .. 0.93
   3 !   19.9   0.7   1.3e-07   0.00036       2      35 ..     125     159 ..     124     166 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1e-05
   PF12799.2  8 LsnNnIkdlppelanLpnLktLnLsnNpi 36
                L ++  ++l+  +a+L++L++L+++n+++
  MMETSP1325-20131115|8922_1 62 LGRTE-SSLES-IASLTKLRHLYMENCHF 88
                44445.68899.***************86 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 6.2e-05
   PF12799.2   3 LevLdLsnN.nIk.dlppelanLpnLktLnLs 32 
                 L++L L+++ +++  l+p l+++ +L++L L+
  MMETSP1325-20131115|8922_1 102 LKMLELRDCwRLEgTLEP-LSSCHQLTVLTLQ 132
                 99*******77**77***.**********997 PP

  == domain 3    score: 19.9 bits;  conditional E-value: 1.3e-07
   PF12799.2   2 nLevLdLsn.NnIk.dlppelanLpnLktLnLsnNp 35 
                 +L+vL L+  ++I+ +l p l++L nL++L+L +++
  MMETSP1325-20131115|8922_1 125 QLTVLTLQAcCSITgSLLP-LSKLHNLEHLDLHGCK 159
                 799*****6479**99***.**************97 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.8     0.068   1.9e+02      18      30 ..      26      38 ..       8      60 .. 0.59
   2 !   10.8   1.6   0.00011      0.29       2      60 ..      31      87 ..      30      88 .. 0.77
   3 !   22.4   1.0   2.5e-08   6.8e-05       3      60 ..     102     159 ..     100     161 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.068
   PF13855.1 18 dgaFkglsnLkvL 30
                 + F++l++L+vL
  MMETSP1325-20131115|8922_1 26 LENFESLTSLHVL 38
                3445555555554 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00011
   PF13855.1  2 nLkeLdLsnN.rlkvipdgaFkglsnLkvLdLsgnnl.ksispeafkgLpsLreLnLsgNr 60
                +L++L++ ++  l +++  + ++l+nL  L+++  ++ +s+  e++++L++Lr+L++++++
  MMETSP1325-20131115|8922_1 31 SLTSLHVLRSpTLGELA--SVGKLTNLVNLSFTLGRTeSSL--ESIASLTKLRHLYMENCH 87
                56667666666677776..8889999999999977773344..5789************98 PP

  == domain 3    score: 22.4 bits;  conditional E-value: 2.5e-08
   PF13855.1   3 LkeLdLsnN.rlk.vipdgaFkglsnLkvLdLs.gnnlk.sispeafkgLpsLreLnLsgNr 60 
                 Lk L L+++ rl+ +++   +++++ L+vL L+ +++++ s+ p  +++L++L++L+L+g++
  MMETSP1325-20131115|8922_1 102 LKMLELRDCwRLEgTLE--PLSSCHQLTVLTLQaCCSITgSLLP--LSKLHNLEHLDLHGCK 159
                 999******99994444..8*************99***658888..99***********985 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       4.1   1.1e+04       6       9 ..      57      60 ..      53      72 .. 0.60
   2 !    6.2   0.1    0.0046        12       1      12 [.      77      88 ..      77      99 .. 0.83
   3 !    5.2   0.0    0.0093        26       2      22 .]     102     123 ..     101     123 .. 0.89
   4 ?    3.3   0.1     0.041   1.1e+02       1      20 [.     125     145 ..     125     148 .. 0.79
   5 !   10.8   0.1   0.00014      0.38       1      15 [.     149     165 ..     149     166 .] 0.86

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 4.1
                EETS CS
  PF00560.28  6 dLsg 9 
                +Ls+
  MMETSP1325-20131115|8922_1 57 NLSF 60
                3333 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0046
                TESEEEETSSBC CS
  PF00560.28  1 nLeeLdLsgNnl 12
                +L++L++ ++++
  MMETSP1325-20131115|8922_1 77 KLRHLYMENCHF 88
                79********55 PP

  == domain 3    score: 5.2 bits;  conditional E-value: 0.0093
                 ESEEEETSS.BCB.CHHHHHHHH CS
  PF00560.28   2 LeeLdLsgN.nlt.slppslsnL 22 
                 L+ L L+++ +l+ +l p ls++
  MMETSP1325-20131115|8922_1 102 LKMLELRDCwRLEgTLEP-LSSC 123
                 889**********99999.8876 PP

  == domain 4    score: 3.3 bits;  conditional E-value: 0.041
                 TESEEEETSS.BCB.CHHHHHH CS
  PF00560.28   1 nLeeLdLsgN.nlt.slppsls 20 
                 +L++L L+ + ++t sl p ls
  MMETSP1325-20131115|8922_1 125 QLTVLTLQACcSITgSLLP-LS 145
                 699******99***88655.54 PP

  == domain 5    score: 10.8 bits;  conditional E-value: 0.00014
                 TESEEEETSS.BCB.CH CS
  PF00560.28   1 nLeeLdLsgN.nlt.sl 15 
                 nLe+LdL g+ +++ +l
  MMETSP1325-20131115|8922_1 149 NLEHLDLHGCkSISgEL 165
                 8*********9998665 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.8   4.9e+03       4       8 ..       8      12 ..       5      28 .. 0.65
   2 ?    0.5   0.0       0.4   1.1e+03       2      16 ..      31      46 ..      30      47 .. 0.72
   3 ?    0.1   0.0      0.58   1.6e+03       3       8 ..      52      58 ..      50      73 .. 0.56
   4 ?    5.4   0.1    0.0098        27       1      15 [.      76      92 ..      76      94 .. 0.82
   5 ?    0.0   0.0      0.59   1.6e+03       3      13 ..     102     113 ..     100     123 .. 0.75
   6 ?    4.9   0.1     0.015        40       1      15 [.     124     139 ..     124     143 .. 0.75
   7 ?    9.7   0.1   0.00036         1       1      13 [.     148     161 ..     148     166 .] 0.84

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.8
   PF13504.1  4 keLdL 8 
                keL+L
  MMETSP1325-20131115|8922_1  8 KELHL 12
                56665 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.4
   PF13504.1  2 nLkeLdLsgnr.LtsL 16
                +L+ L++ + + L +L
  MMETSP1325-20131115|8922_1 31 SLTSLHVLRSPtLGEL 46
                6999998777666665 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.58
   PF13504.1  3 LkeLd.L 8 
                L++L  L
  MMETSP1325-20131115|8922_1 52 LTNLVnL 58
                6666313 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.0098
   PF13504.1  1 pnLkeLdLsgnr..Lts 15
                ++L+ L+  +++  L +
  MMETSP1325-20131115|8922_1 76 TKLRHLYMENCHflLGT 92
                68*********976665 PP

  == domain 5    score: 0.0 bits;  conditional E-value: 0.59
   PF13504.1   3 LkeLdLsgn.rL 13 
                 Lk L L+++ rL
  MMETSP1325-20131115|8922_1 102 LKMLELRDCwRL 113
                 788999999435 PP

  == domain 6    score: 4.9 bits;  conditional E-value: 0.015
   PF13504.1   1 pnLkeLdL.sgnrLts 15 
                 ++L++L L +++++t 
  MMETSP1325-20131115|8922_1 124 HQLTVLTLqACCSITG 139
                 68******66677985 PP

  == domain 7    score: 9.7 bits;  conditional E-value: 0.00036
   PF13504.1   1 pnLkeLdLsgnr.L 13 
                 +nL+ LdL+g++ +
  MMETSP1325-20131115|8922_1 148 HNLEHLDLHGCKsI 161
                 79*********855 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.7   7.3e+03       2       9 ..       5      12 ..       4      14 .. 0.83
   2 ?   -1.6   0.0       1.4   3.8e+03       3       8 ..      31      36 ..      29      44 .. 0.78
   3 ?    0.0   0.0      0.44   1.2e+03       4      11 ..      52      60 ..      50      73 .. 0.71
   4 ?    3.8   0.0     0.025        69       1      14 [.      75      88 ..      75      99 .. 0.82
   5 ?    4.1   0.1      0.02        55       1      16 [.     123     139 ..     123     143 .. 0.78
   6 ?   10.1   0.2   0.00024      0.66       1      17 [.     147     164 ..     147     166 .] 0.86

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 2.7
   PF13516.1  2 knLtsLdL 9 
                +++++L+L
  MMETSP1325-20131115|8922_1  5 SSIKELHL 12
                68999997 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.4
   PF13516.1  3 nLtsLd 8 
                +LtsL+
  MMETSP1325-20131115|8922_1 31 SLTSLH 36
                788887 PP

  == domain 3    score: 0.0 bits;  conditional E-value: 0.44
   PF13516.1  4 LtsL.dLsn 11
                Lt+L +Ls+
  MMETSP1325-20131115|8922_1 52 LTNLvNLSF 60
                666656665 PP

  == domain 4    score: 3.8 bits;  conditional E-value: 0.025
   PF13516.1  1 lknLtsLdLsnNqi 14
                l++L++L + n+++
  MMETSP1325-20131115|8922_1 75 LTKLRHLYMENCHF 88
                689*********83 PP

  == domain 5    score: 4.1 bits;  conditional E-value: 0.02
   PF13516.1   1 lknLtsLdLsnNq.igd 16 
                 + +Lt+L L+ +  i++
  MMETSP1325-20131115|8922_1 123 CHQLTVLTLQACCsITG 139
                 899******97533875 PP

  == domain 6    score: 10.1 bits;  conditional E-value: 0.00024
   PF13516.1   1 lknLtsLdLsnNq.igde 17 
                 l nL++LdL +++ i++e
  MMETSP1325-20131115|8922_1 147 LHNLEHLDLHGCKsISGE 164
                 67**********988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 779.99
//
Query:       MMETSP1325-20131115|8924_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-07   29.3   0.0    1.4e-06   28.3   0.0    1.5  1  PF00169.24 PH domain
    0.00035   20.3   5.8    0.00046   19.9   4.0    1.2  1  PF08614.6  Autophagy protein 16 (ATG16)
    0.00077   18.9   4.0     0.0012   18.3   2.8    1.3  1  PF04156.9  IncA protein
     0.0014   16.3  18.2     0.0019   15.9  12.6    1.1  1  PF01576.14 Myosin tail
     0.0023   15.9   0.1     0.0026   15.6   0.0    1.1  1  PF05804.7  Kinesin-associated protein (KAP)
     0.0065   15.8  11.2       0.27   10.6   0.7    2.4  2  PF04977.10 Septum formation initiator
  ------ inclusion threshold ------
       0.04   12.7   8.2       0.06   12.1   5.7    1.2  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
      0.077   12.5   0.2       0.12   11.9   0.1    1.2  1  PF07273.7  Protein of unknown function (DUF1439)
       0.15   10.1   6.1       0.18    9.9   4.3    1.1  1  PF09726.4  Transmembrane protein
       0.52    9.6  11.5        1.4    8.1   7.5    1.7  2  PF13870.1  Domain of unknown function (DUF4201)
        1.7    6.9   7.0        1.9    6.7   1.4    1.9  2  PF04124.7  Dor1-like family
        4.8    7.4   8.5         23    5.2   5.3    2.2  1  PF06156.8  Protein of unknown function (DUF972)


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   1.2e-09   1.4e-06       2      98 ..      27     127 ..      26     131 .. 0.95

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 1.2e-09
                 SBEEEEEEEE.TSSSCEEEEEEEEETTEEEEESSSST......TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHH CS
  PF00169.24   2 ikeGyllkks.ellktwkkryfvLtsnyLlyfksskk......ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqa 98 
                 +++G ++k++ + +++wk r+fv   n L+y+++++           ++ g+i l++ctv+k + +      +    +++t+ +++ y l a s eer +W ++
  MMETSP1325-20131115|8924_1  27 VMHGVMKKQGqGNKRSWKDRFFVQLFNLLFYYDYESAppegedLDPDKLVGVICLEGCTVTKIEVPA---GVSGGAGLVLTTASNRIYTLVAQSVEERDQWAES 127
                 689*************************************99999999*****************96...99999**************************875 PP

>> PF08614.6  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   4.0   4.1e-07   0.00046      58     150 ..     184     276 ..     115     283 .. 0.84

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 4.1e-07
   PF08614.6  58 tsasgsgsdaaiaeleqklaklreelaelhkkrgelaqrllllneeleekreeiaekekelaelqseiksleeeikdleeelkekekaletlq 150
                  +a+++++ a+ a++ +++a+ r+ la+l  +++el++++ + +e+  ++ e   + + +l  +++e+  +++e+ +l+ + +e+ + +++l+
  MMETSP1325-20131115|8924_1 184 RAAEEEANAAKRAADDAERAAERDQLAKLRTENEELTKKVKEFSEKQTQLFEAKLTMKSQLGDIREELGIKNKELAELQLATEELRRENADLK 276
                 456667788889999999999999999999999999999999999999999999999999999999999999999999999999999999886 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   2.8   1.1e-06    0.0012      76     167 ..     168     275 ..     132     293 .. 0.63

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 1.1e-06
   PF04156.9  76 e...............srlqeelsesesqlsele.....eeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrsel 167
                 +                +++ee  ++++  +++e     ++l +l+++++el++++++ +e +++l e++   +++l +++e++  ++ke++el+ + ++l++    +  +l
  MMETSP1325-20131115|8924_1 168 AavccpkgtvstlvdrRAAEEEANAAKRAADDAEraaerDQLAKLRTENEELTKKVKEFSEKQTQLFEAKLTMKSQLGDIREELGIKNKELAELQLATEELRR----ENADL 275
                 0555555555555555233334444444444444333378999999999999999999999999999999999999999999999999999999922222222....22222 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9  12.6   1.7e-06    0.0019     183     287 ..     184     286 ..     180     294 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.7e-06
  PF01576.14 183 kqlesqlselkvkldelqrqlndltskksrlqsEnseLtrqleeaeaqvsnlsklksqlesqLeeakrsleeesrerakLqaklrqlesdldslreqleeeseak 287
                 +++e++ +  k  +d+++r+ +    + ++l +En+eLt++++e   +  +l  +k  ++sqL +++++l   ++e a+Lq   ++l+++ + l+++ e  sea+
  MMETSP1325-20131115|8924_1 184 RAAEEEANAAKRAADDAERAAE--RDQLAKLRTENEELTKKVKEFSEKQTQLFEAKLTMKSQLGDIREELGIKNKELAELQLATEELRRENADLKASAELRSEAR 286
                 6788999999999999999876..68999**********************************************************************999997 PP

>> PF05804.7  Kinesin-associated protein (KAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.3e-06    0.0026     240     305 ..     201     276 ..     140     298 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 2.3e-06
   PF05804.7 240 p.........ilkkdyeeslkklkilvkkqeqllrvalylllnlaedvkvelkmrrknivkllvka..ldrdniell 305
                           +l+ + ee +kk+k + +kq ql+ + l++   l  d++ el +++k++ +l + +  l r+n++l 
  MMETSP1325-20131115|8924_1 201 EraaerdqlaKLRTENEELTKKVKEFSEKQTQLFEAKLTMKSQLG-DIREELGIKNKELAELQLATeeLRRENADLK 276
                 24444444446688899999********************99996.8************988766522669999996 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   2.4   0.00049      0.56      23      52 ..     199     227 ..     189     234 .. 0.87
   2 !   10.6   0.7   0.00023      0.27      22      57 ..     254     281 ..     240     296 .. 0.61

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00049
  PF04977.10  23 kqeiaalqaelaklkaeneeLeaevkdLks 52 
                 ++e aa  ++lakl+ eneeL ++vk+  s
  MMETSP1325-20131115|8924_1 199 DAERAAERDQLAKLRTENEELTKKVKEF-S 227
                 78999*********************97.3 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00023
  PF04977.10  22 lkqeiaalqaelaklkaeneeLeaevkdLksdedyi 57 
                 +++e+a+lq   ++l+ en++L+a  +        +
  MMETSP1325-20131115|8924_1 254 KNKELAELQLATEELRRENADLKASAE--------L 281
                 456666666666666666666666544........4 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   5.7   5.2e-05      0.06      26     109 ..     206     282 ..     203     292 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.2e-05
   PF10186.4  26 rlrlanlkaeketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.a 109
                 r +la+l++e+e+l kkv+e  e        +  ql  +++  k ++  ir+ +  +++e+ +++   eel++++a+++ ++e +
  MMETSP1325-20131115|8924_1 206 RDQLAKLRTENEELTKKVKEFSE--------KQTQLFEAKLTMKSQLGDIREELGIKNKELAELQLATEELRRENADLKASAElR 282
                 5689******************9........6778888889999999*******************************9999854 PP

>> PF07273.7  Protein of unknown function (DUF1439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00011      0.12       7      82 ..     216     293 ..     214     296 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00011
   PF07273.7   7 nqyLqkev.elekkvg..ipglikaevsledlkvkiGreeadkvalsakakvkvslllgklkaklklkleaspeYdkek 82 
                 n+ L+k+v e+++k+   ++  + ++ +l d+  ++G ++++ ++l+++++ +++   ++lka  +l+ ea+p Yd++ 
  MMETSP1325-20131115|8924_1 216 NEELTKKVkEFSEKQTqlFEAKLTMKSQLGDIREELGIKNKELAELQLATE-ELRRENADLKASAELRSEARPMYDEAR 293
                 5668888878877764013444456667889999***99999999999887.679999******************875 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.3   0.00016      0.18     433     526 ..     179     278 ..     116     294 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00016
   PF09726.4 433 eLsaarkteselrskisllsslersl.kselqqlkkendllqtklqelvsakqkekqslqslekrLkeer.....earvsvekqLaeekkrkkeeeetaa 526
                  L   r  e+e +    + +++er++ +++l +l+ en++l +k++e ++++ +   +  ++  +L++ r     +++  +e qLa e  r+ +++ +a 
  MMETSP1325-20131115|8924_1 179 TLVDRRAAEEEANAAKRAADDAERAAeRDQLAKLRTENEELTKKVKEFSEKQTQLFEAKLTMKSQLGDIReelgiKNKELAELQLATEELRRENADLKAS 278
                 4555666666666666666666665535667777777777777777776655554444444444444333001223456667777777776666665554 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   2.0      0.04        46     102     142 ..     197     237 ..     184     240 .. 0.68
   2 ?    8.1   7.5    0.0012       1.4      64     137 ..     208     281 ..     201     290 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.04
   PF13870.1 102 ekeeklaklrkelykvklerdklrkenkklrqqggllrkPa 142
                  +++++a  r++l k+++e++ l k+ k+++++  +l+  +
  MMETSP1325-20131115|8924_1 197 ADDAERAAERDQLAKLRTENEELTKKVKEFSEKQTQLFEAK 237
                 44555666688888888888888888888887777766555 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0012
   PF13870.1  64 eLkkLkkkttktvhalthlkeklhfleeeleelkkelkekeeklaklrkelykvklerdklrkenkklrqqggl 137
                 +L kL+       ++ ++  ek   l e    +k++l ++ e+l    kel +++l  + lr+en++l+++ +l
  MMETSP1325-20131115|8924_1 208 QLAKLRTENEELTKKVKEFSEKQTQLFEAKLTMKSQLGDIREELGIKNKELAELQLATEELRRENADLKASAEL 281
                 5889999999999999999999999*9******************************************99877 PP

>> PF04124.7  Dor1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   1.4    0.0017       1.9      57      90 ..     204     237 ..     188     251 .. 0.79
   2 ?    4.7   4.4     0.007       7.9       8      92 ..     208     288 ..     202     296 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0017
   PF04124.7  57 diraqledLvlklpkLteectrfskkaeeisekr 90 
                 + r+ql++L+ + ++Lt+++++fs+k +++ e +
  MMETSP1325-20131115|8924_1 204 AERDQLAKLRTENEELTKKVKEFSEKQTQLFEAK 237
                 4489*************************99974 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.007
   PF04124.7   8 pleelekepelLaeeaeeilaqiqdLarknyktlidaaealeairqelediraqledLvlklpkLteectrfskkaeeisekrke 92 
                 +l++l++e e+L+++ +e  ++  +L    + + ++  ++l +ir+el+  +++l++L l +++L  e    +++ae  se r +
  MMETSP1325-20131115|8924_1 208 QLAKLRTENEELTKKVKEFSEKQTQL----FEAKLTMKSQLGDIREELGIKNKELAELQLATEELRRENADLKASAELRSEARPM 288
                 56666667777777666666666655....4555788888999999999989999999999999999998888888888888655 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   5.3      0.02        23       3      58 ..     216     271 ..     206     297 .. 0.59

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.02
   PF06156.8   3 kkelfdklseleeqleelleeleelkkelkelleenaelkleneklrerleeleee 58 
                 ++el++k++e++e+ ++l e   ++k++l ++ ee    + e ++l+   eel++e
  MMETSP1325-20131115|8924_1 216 NEELTKKVKEFSEKQTQLFEAKLTMKSQLGDIREELGIKNKELAELQLATEELRRE 271
                 55777777777777777777777777777777766544444444444444444332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1103  (0.0806758); expected 273.4 (0.02)
Passed bias filter:                      555  (0.0405939); expected 273.4 (0.02)
Passed Vit filter:                       105  (0.00767993); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.88u 0.38s 00:00:01.26 Elapsed: 00:00:00.65
# Mc/sec: 1260.85
//
Query:       MMETSP1325-20131115|8927_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 382.58
//
Query:       MMETSP1325-20131115|8925_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.9   0.9      0.027   14.6   0.7    1.2  1  PF09806.4 Cyclin-dependent kinase 2-associated protein


Domain annotation for each model (and alignments):
>> PF09806.4  Cyclin-dependent kinase 2-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.7     2e-06     0.027      32      86 ..      48     131 ..      18     144 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2e-06
   PF09806.4  32 kqreerekqaqve.............................snhrgrssvsgsagssssnssalrarsskqssaaaaaaaeka 86 
                  + ee+++ + v+                             +  ++ ss    a+++++++sa +a+ +++ s+aa+aa++ +
  MMETSP1325-20131115|8925_1  48 VAPEEEARVPMVQrgvtlaflrhlmlelaaldrsdidagqflNGVHTTSSATDCASTAANAASARSAEGRRSASTAANAACASR 131
                 3444445555555888888888888888888888888888887778899999999**************************954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       526  (0.0384728); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.59
# Mc/sec: 682.35
//
Query:       MMETSP1325-20131115|8929_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|8916_1  [L=575]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-14   53.4   0.0    2.7e-14   52.6   0.0    1.3  1  PF00025.16 ADP-ribosylation factor family
    3.7e-07   29.8   0.0     0.0011   18.6   0.0    2.4  2  PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
      4e-07   29.9   0.0    2.7e-06   27.2   0.0    2.3  3  PF01926.18 50S ribosome-binding GTPase
    0.00081   18.5   0.0     0.0015   17.6   0.0    1.4  1  PF09439.5  Signal recognition particle receptor beta subunit
     0.0023   18.3   0.0     0.0044   17.3   0.0    1.5  1  PF08477.8  Miro-like protein
     0.0052   15.4   0.0       0.01   14.4   0.0    1.4  1  PF00503.15 G-protein alpha subunit
       0.01   15.1   0.0      0.018   14.3   0.0    1.3  1  PF00071.17 Ras family
  ------ inclusion threshold ------
      0.079   10.7   0.1       0.24    9.1   0.0    1.7  2  PF10139.4  Putative bacterial virulence factor
       0.11   12.4   1.4        5.2    7.1   0.0    2.3  2  PF13837.1  Myb/SANT-like DNA-binding domain
        0.2   11.7   0.2         14    5.8   0.0    2.8  2  PF00910.17 RNA helicase
       0.25   10.3   0.0       0.55    9.2   0.0    1.5  1  PF04670.7  Gtr1/RagA G protein conserved region
          1    7.9   5.4        2.9    6.4   0.2    3.0  3  PF03308.11 ArgK protein


Domain annotation for each model (and alignments):
>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   2.3e-17   2.7e-14      19     143 ..     281     409 ..     277     427 .. 0.86

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 2.3e-17
                 EE--TT---HHHHHHHHHS-EEEE-S--S-EEEEEEE...TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT.-CTTHHHHHHHHHHHHTS..GGGTTSEEEEEEE-TTSTT---HHHHHHHTTTT CS
  PF00025.16  19 llGLDnaGKtTilkklkleelvttvPTigfnveelei...knlkftvwDvGGqeklRplWknYfektdavifvvDsa.dreRleeakeeLkallee..eelkevallvlaNKqDlpealseeelrellgle 143
                 + GL +aGK+T++  l+ +   + + Tigf  +++ei    ++k+ ++D+ G   + + W  Y+++++a i+v+D+a d+   e++ +  +++ +e  + +   +llv+aNKqDl++a + e+++ +lgl 
  MMETSP1325-20131115|8916_1 281 VFGLTGAGKSTMVVALNGDPDPKPTKTIGFRRHNMEIggdVGVKIVFYDMPGS--MQKKWAGYTTDVHAAIYVLDAAaDEAQWEKSVAAYAKFSDEcaKFIDGKPLLVVANKQDLEGARTVEQVTVALGLA 409
                 68***********************************655579********96..6789****************87255577777777777766522335699**********************99986 PP

>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0012       1.4       8      57 ..      87     137 ..      80     144 .. 0.78
   2 !   18.6   0.0   9.7e-07    0.0011       4      56 ..     179     233 ..     176     245 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0012
                 --EEE-ST---BB---EEEE-----EEEE-----.EEEE----EE--SS-- CS
   PF09038.5   8 rvvakwssngyfysgkitkdagegkykllfddgy.ecdvlgkdillcdpip 57 
                  v  ++   g ++ gki     +g y++ +ddg  e +v    +++ +p p
  MMETSP1325-20131115|8916_1  87 AVTVNYRNSGNLFPGKISAVNADGTYNIAYDDGDsEKNVPKSRVMFHEPEP 137
                 677788999***********************9625555555566666655 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 9.7e-07
                 ------EEE-ST---BB---EEEE----.-EEEE-----EE.EE----EE--SS- CS
   PF09038.5   4 fvglrvvakwssngyfysgkitkdageg.kykllfddgyec.dvlgkdillcdpi 56 
                 +vg rv  ++ s g f+ g i   a +g k+ + +ddg e  +vl k i l+dp 
  MMETSP1325-20131115|8916_1 179 VVGARVQVNYRSSGNFFPGVISAVASDGaKFDIAYDDGEEQkNVLKKMIKLVDPA 233
                 689******************999887659********9863799999*****95 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.3   1.4e+03      48      63 ..     236     251 ..     204     266 .. 0.62
   2 !   27.2   0.0   2.4e-09   2.7e-06       2     114 .]     279     390 ..     278     390 .. 0.62
   3 ?   -3.4   0.0       7.5   8.5e+03      46      70 ..     532     556 ..     509     565 .. 0.51

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 1.3
                 EEEE---SSSHHHHHH CS
  PF01926.18  48 ilvDtPGiiegasedk 63 
                  ++D+PG + +a+++ 
  MMETSP1325-20131115|8916_1 236 AFIDVPGSAVDAASEA 251
                 5899999554433333 PP

  == domain 2    score: 27.2 bits;  conditional E-value: 2.4e-09
                 EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE..ETTE....EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTSHHHH......HHHHHHHHH......H...TCCCEEEEEEC CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev..kkek....iilvDtPGiiegasedkeiegikkylekveradvlllvvdasavlke......adkellnel......e...akkplilvlnk 114
                 v+++G++ +GKSt++ aL g+       +p +T    ++++          i+++D+PG +    ++k+            +++++++v+da a + +      a      +       +    +kpl++v+nk
  MMETSP1325-20131115|8916_1 279 VGVFGLTGAGKSTMVVALNGD----PDPKPTKTIGFRRHNMeiGG-DvgvkIVFYDMPGSM----QKKW-------AGYTTDVHAAIYVLDAAADEAQweksvaA------YAkfsdecAkfiDGKPLLVVANK 390
                 89****************864....35555555555333333211.1344478******55....4455.......3334888999*****66633332223332......22222222245589******998 PP

  == domain 3    score: -3.4 bits;  conditional E-value: 7.5
                 EEEEEE---SSSHHHHHHHHHHHHH CS
  PF01926.18  46 kiilvDtPGiiegasedkeiegikk 70 
                 k+ l+ + G+ ++ s++k+++  ++
  MMETSP1325-20131115|8916_1 532 KVALTMCGGLRKPVSKKKKKHTWEE 556
                 3335555666666555554333333 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.3e-06    0.0015       8     137 ..     281     406 ..     277     437 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.3e-06
                 EE--TT---HHHHHHHHHS.S-------SS-EEETT-...-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT---HHHHHHHH CS
   PF09439.5   8 lvGlsdsGKTslftrLttd.svkktvtSqessaalkvksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflakspklikdaL 137
                 + Gl+ +GK ++   L  d   k+t t        ++ ++ g k+ + D+PG   +++k   +    + +++ ++v+D+++d+ + ++    + +   + +k  ++ ++l+  nKq+l  a++ + +  aL
  MMETSP1325-20131115|8916_1 281 VFGLTGAGKSTMVVALNGDpDPKPTKTIGFRRHNMEIGGDVGVKIVFYDMPGS--MQKKWAGY---TTDVHAAIYVLDAAADEAQWEKSVAAYAKFSDECAKFIDGKPLLVVANKQDLEGARTVEQVTVAL 406
                 6799*************996667777766888899999999***********6..55666655...7789************9998776666788888889999******************988776665 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   3.9e-06    0.0044       2     119 .]     279     392 ..     278     392 .. 0.73

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 3.9e-06
   PF08477.8   2 vvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtel.lelwdlggreelkkehelllkkadaillvydltdeesl..eevsellawlaelrklgkk.ipvilvgnklD 119
                 v v+G +g+GKs+++++l g+ +p     +++k+ +     +e+ +d +  + + d+ g+ + k       +++ a++ v+d + +e    ++v ++ +  +e +k      p+ +v+nk+D
  MMETSP1325-20131115|8916_1 279 VGVFGLTGAGKSTMVVALNGDPDP-----KPTKTIGFRRHNMEIGGDVGVkIVFYDMPGSMQKKW--AGYTTDVHAAIYVLDAAADEAQweKSVAAYAKFSDECAK-FIDgKPLLVVANKQD 392
                 789****************98888.....77777777777788888877777899***9987776..47799*********9987764311334444333333333.333479999999998 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   8.8e-06      0.01     209     256 ..     305     352 ..     293     356 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 8.8e-06
                 XXXXXXEEEEEXX...XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEE CS
  PF00503.15 209 lkttGiseikfeve..sktefrlvDvGGqrserkkWipcfedvdaiiFlv 256
                 +kt+G+  ++ e+    ++++ ++D+ G+   +kkW+ ++ dv+a i++ 
  MMETSP1325-20131115|8916_1 305 TKTIGFRRHNMEIGgdVGVKIVFYDMPGSM--QKKWAGYTTDVHAAIYVL 352
                 69***********99999***********9..69**************96 PP

>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.6e-05     0.018       4     126 ..     281     403 ..     279     425 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.6e-05
                 EE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEET.TEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-.HHHHHTHHHHHHHHHHHST...TTSSEEEE---TTGGGG-SS-HHH CS
  PF00071.17   4 lvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievd.gkevkleiwDTAGqeefkslrslyyrdaegillvydits.resfenvkkwveeikrvae...envpivLvGnKvDleekravstee 126
                 + G ++ GK+++++    ++ + + ++Ti   f ++++e+  +  vk+  +D  G    ++    y +d+++++ v d    ++ +e+    + ++++ +    ++ p+++v+nK Dle  r+v++ +
  MMETSP1325-20131115|8916_1 281 VFGLTGAGKSTMVVALN-GDPDPKPTKTI--GFRRHNMEIGgDVGVKIVFYDMPGS--MQKKWAGYTTDVHAAIYVLDAAAdEAQWEKSVAAYAKFSDECAkfiDGKPLLVVANKQDLEGARTVEQVT 403
                 5688999****999865.55566667788..5667777777456799*******96..4566678999999999999976514445554455555555555455479*************99998754 PP

>> PF10139.4  Putative bacterial virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00021      0.24      43      75 ..     276     308 ..     244     315 .. 0.83
   2 ?   -1.4   0.0      0.33   3.7e+02     582     667 ..     454     537 ..     425     559 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00021
   PF10139.4  43 pmsvGlfGlsqAgKsyLisaLaanenGkletrl 75 
                 p++vG+fGl  AgKs +++aL ++ + k + ++
  MMETSP1325-20131115|8916_1 276 PLTVGVFGLTGAGKSTMVVALNGDPDPKPTKTI 308
                 79*******************998776666555 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.33
   PF10139.4 582 edekevaekrriaeqllraLqerakvlgelLeaLllsedelrrlylqeeeasedaadlaakkeaaeppsvedeidlfadaaaaaea 667
                      ++ek+r ae + ++L+ ++ v+  +L++ +  ++ ++ + ++  + +e +ad++++ +++ pp  ++  +l +++++a + 
  MMETSP1325-20131115|8916_1 454 RARVATDEKEREAEEFKAKLEREKRVFCTILREKAWCDEPVECMSFE--DGHEFLADETGELQEEMPPITAEICRLVNNHKVALTM 537
                 44445667777788888888888888888888887777777754444..7777777777777777777777777777777766655 PP

>> PF13837.1  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.2     0.039        44      32      73 ..     447     486 ..     431     505 .. 0.79
   2 ?    7.1   0.0    0.0046       5.2      28      49 ..     545     566 ..     523     575 .] 0.80

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.039
                 --HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHS--S CS
   PF13837.1  32 knkelWeevaeamaergykrspkqCkdKwenLkkrYkkeker 73 
                 k+   +ee+ +++a+ + +r++++ k K e  k+ + ++ + 
  MMETSP1325-20131115|8916_1 447 KG--RYEELRARVATDEKEREAEEFKAKLEREKRVFCTILRE 486
                 44..49************************999988877554 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0046
                 ..SS--HHHHHHHHHHHHH--- CS
   PF13837.1  28 ggkkknkelWeevaeamaergy 49 
                  +kkk+k++Weev + ++er  
  MMETSP1325-20131115|8916_1 545 VSKKKKKHTWEEVLAYVKERRA 566
                 56788889*********99865 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1      0.11   1.2e+02       3      20 ..     281     298 ..     279     371 .. 0.64
   2 ?    5.8   0.0     0.012        14      55      92 ..     507     543 ..     499     550 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.11
  PF00910.17   3 lyGpsgeGKStlakeLak 20 
                 ++G +g GKSt++  L  
  MMETSP1325-20131115|8916_1 281 VFGLTGAGKSTMVVALNG 298
                 789999999999987544 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.012
  PF00910.17  55 idDfgqvkdeenpsdlaelirlvsstpyplnmasleek 92 
                  d+ g+ ++e  p + ae++rlv++ ++ l m     k
  MMETSP1325-20131115|8916_1 507 ADETGELQEE-MPPITAEICRLVNNHKVALTMCGGLRK 543
                 5677777766.7779*****************987666 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00049      0.55       5     123 ..     282     393 ..     279     405 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00049
   PF04670.7   5 mGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrflgnl..klnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesre..leedlekfqeileallqyspeakvfvlihKmDl 123
                  G +g+GK++m   +  +  ++ t     Ti  +++++++ g +  k+   D++G    +++++         +v++ iyV+D+  +e  +e++++ + +      ++     + v  +K Dl
  MMETSP1325-20131115|8916_1 282 FGLTGAGKSTMVVALNGDPDPKPTK----TIGFRRHNMEIGGDVgvKIVFYDMPGS---MQKKW----AGYTTDVHAAIYVLDAAADEaqWEKSVAAYAKFSDECAKFIDGKPLLVVANKQDL 393
                 6889999999988888887787755....555566666666665225556799998...55543....677899***********884559*****999998888887777777777777776 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.2    0.0026       2.9      31      49 ..     278     296 ..     262     300 .. 0.90
   2 ?    2.1   0.1     0.054        61     171     250 ..     385     471 ..     383     486 .. 0.66
   3 ?   -0.6   0.0      0.35     4e+02     220     262 ..     523     565 ..     520     569 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0026
                 EE--B-------HHHHHH- CS
  PF03308.11  31 vvGltGvPGaGkstlvekl 49 
                  vG+ G  GaGkst+v +l
  MMETSP1325-20131115|8916_1 278 TVGVFGLTGAGKSTMVVAL 296
                 79*************9887 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.054
                 EEEE----HHHHHHHHHHHHHHHHHS--........SBTTB--EEEE-BTTTTB--HHHHHHHHHHHHHHHH---HHHHHHHHHHHHH CS
  PF03308.11 171 ilvvnkaDkeeaekaarelraaleleee........kekeWrppvlktsavegeGidelvdaieehrevlektGlleekrreraeeel 250
                 ++v nk+D e+a+++ +++++al l  +        + +  r    ++    ++G+   ++ai+   e l++  +++ek+re +e ++
  MMETSP1325-20131115|8916_1 385 LVVANKQDLEGARTV-EQVTVALGLAGRpecevlaaTAHPKRHDTGEVDERAERGLMWTINAIKGRYEELRARVATDEKEREAEEFKA 471
                 6789****9998755.567778887766444443322333333344444556788888888998888888888888888777666554 PP

  == domain 3    score: -0.6 bits;  conditional E-value: 0.35
                 HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF03308.11 220 elvdaieehrevlektGlleekrreraeeelkelveeevlkkv 262
                 e+   +++h+ +l+  G l++   ++++++++e v   v ++ 
  MMETSP1325-20131115|8916_1 523 EICRLVNNHKVALTMCGGLRKPVSKKKKKHTWEEVLAYVKERR 565
                 7888899**********99999999999999988888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (575 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.03u 0.37s 00:00:01.40 Elapsed: 00:00:01.18
# Mc/sec: 1167.72
//
Query:       MMETSP1325-20131115|8932_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 535.00
//
Query:       MMETSP1325-20131115|8931_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.4   0.2     0.0027   17.3   0.1    1.6  1  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1     2e-07    0.0027     152     225 ..      19      93 ..       5     110 .. 0.74

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 2e-07
                 HHHHHHHHHHCSS--EEB-SS-SGGGEEEE.TTTTEE..EE---TT-B...BE-TCHHHHCCCTCHTCHHHHHHHHHHCH CS
  PF01636.18 152 vlaalaallpgaeppvllHgDlhpgNllvd.pddgrv..gviDfedag...lgpplyDlasllrrwreeldpellaallr 225
                 v+a l +ll+     +  H D+hpgNl+   ++d+r   ++iDf++ +   + ++++ +a+++ ++r++ +++l  +l+r
  MMETSP1325-20131115|8931_1  19 VRAFLTQLLD----VGTFHADPHPGNLMKLpDGDPRGklALIDFGLISeisPTDREHIIAAVV-HLRHRSWEALVGDLVR 93 
                 5666666666....7889**********99955555556*****8754211555555566666.7888888888887777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 1448.23
//
Query:       MMETSP1325-20131115|8928_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 856.57
//
Query:       MMETSP1325-20131115|8933_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 253.73
//
Query:       MMETSP1325-20131115|8934_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-05   22.1   0.0      9e-05   21.6   0.0    1.3  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   6.6e-09     9e-05     183     260 .]       2      89 ..       1      89 [. 0.87

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 6.6e-09
                 HHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH..........HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
  PF00069.20 183 WslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks..........eelkdlikkllekdpakRltaeeilkhpwl 260
                 W+lG++ y  l g++pf  e  e+ +++i +  +++   +   +  +           + +k ++ +ll +dp++Rlt++ + +h ++
  MMETSP1325-20131115|8934_1   2 WALGCVAYYCLRGRPPFFAEAAEELKATIVRFEGGSEGGQGGADGGEAngvefpasfpAPAKAMVVELLSPDPDARLTVHAAARHAFF 89 
                 ********************8888888888888877766665554433889999***9***************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 1087.95
//
Query:       MMETSP1325-20131115|8936_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-23   82.3   1.8    3.5e-23   82.3   1.2    1.6  2  PF08315.7  cwf18 pre-mRNA splicing factor
  ------ inclusion threshold ------
      0.062   13.4   4.0       0.09   12.9   2.8    1.3  1  PF03592.11 Terminase small subunit


Domain annotation for each model (and alignments):
>> PF08315.7  cwf18 pre-mRNA splicing factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.3   1.2   5.1e-27   3.5e-23      61     129 .]      57     124 ..      19     124 .. 0.89
   2 ?   -2.7   0.3      0.99   6.8e+03      29      32 ..     133     136 ..     125     146 .. 0.36

  Alignments for each domain:
  == domain 1    score: 82.3 bits;  conditional E-value: 5.1e-27
   PF08315.7  61 aapkqaaeieeeikeqleedeeeaeeeidLfklqPkkpnWDLKRdlekklekLerrtqkAiaelirerl 129
                 ++ k+a ++e++ik++++++ ee + + +L +++PkkpnWDLKRd++kk+ekL+rrtq Ai+e+i+er+
  MMETSP1325-20131115|8936_1  57 EPVKKAPKVEDAIKAEIKAHVEE-QGGNELLNIAPKKPNWDLKRDIAKKMEKLNRRTQVAIVEIIKERI 124
                 233379**************988.99******************************************7 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.99
   PF08315.7  29 ekee 32 
                 ++ee
  MMETSP1325-20131115|8936_1 133 SEEE 136
                 1111 PP

>> PF03592.11  Terminase small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.8   1.3e-05      0.09      22      88 ..      68     140 ..      60     148 .] 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.3e-05
  PF03592.11  22 AikAgyskktarsqgselLk......kpkIkayIdelkkerekrtiitadevleelteiargdekeevevgtk 88 
                 AikA+ +++  ++ g+elL+      + + k  I++++++++ rt++ + e+++e   +  ++e+ e e +++
  MMETSP1325-20131115|8936_1  68 AIKAEIKAHVEEQGGNELLNiapkkpNWDLKRDIAKKMEKLNRRTQVAIVEIIKERIAQQAAEESSEEESDED 140
                 9******************7666655678************************98777777776666654443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       917  (0.0670714); expected 273.4 (0.02)
Passed bias filter:                      542  (0.0396431); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.54
# Mc/sec: 656.78
//
Query:       MMETSP1325-20131115|8935_1  [L=470]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-30  103.4   0.0    1.2e-29  102.9   0.0    1.2  1  PF02786.12 Carbamoyl-phosphate synthase L chain, ATP binding domain
    1.7e-17   63.6   0.0    3.2e-17   62.7   0.0    1.4  1  PF13535.1  ATP-grasp domain
      2e-17   62.8   0.0    3.8e-17   61.8   0.0    1.5  1  PF02142.17 MGS-like domain
    1.4e-08   34.1   0.0    2.7e-08   33.2   0.0    1.4  1  PF02222.17 ATP-grasp domain
    1.3e-06   27.8   0.0    2.5e-06   26.9   0.0    1.4  1  PF07478.8  D-ala D-ala ligase C-terminus
  ------ inclusion threshold ------
      0.027   14.2   0.0       0.11   12.2   0.0    2.0  2  PF02655.9  ATP-grasp domain
      0.041   13.2   0.0       0.09   12.1   0.0    1.5  1  PF08443.6  RimK-like ATP-grasp domain


Domain annotation for each model (and alignments):
>> PF02786.12  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.9   0.0   6.3e-33   1.2e-29      25     208 ..       4     182 ..       1     185 [. 0.95

  Alignments for each domain:
  == domain 1    score: 102.9 bits;  conditional E-value: 6.3e-33
                 SSHHHHHHHHHH----EEEEETT-------EEESSHCCHHHHHHHHHHHCCHHHSTS-EEEEE--SS-EEEEEEEEE-TTS-EEEEEEEEECCEE..TTEEEEEEES--S--HHHHHHHHHHHHHHHHH-------EEEEEE-TT---EEEEEEESS--TTHHHHHHH----HHHHHHHHH----C CS
  PF02786.12  25 etleealaiakeigyPviikaafglGGkGmrvardeeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvevlrDakgnvitvcerenslql..rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGldlvkeaakialgekL 208
                 ++++ ala+a+e+gyPv+++++f l G  m+va++ e l++ ++ a + +    g+k v + k+++g +eiE++ ++D+ g v+  +  e + +   + ++     P q +++ +r++++  + k+++e++++g  +v+fl +  +++  viE N R s++ +  +k+ G+d +++a k+ +g++ 
  MMETSP1325-20131115|8935_1   4 SDMQSALAFADEVGYPVLVRPSFVLSGAAMNVAHTPEALEAFLNLAGDVS----GDKPVVMSKFVDGAREIEMDGVADN-GVVVAAAVHEHIENAgvHSGDATLLLPPQDISSYTRSRVEDMTRKIAKELNISGPFNVQFLAK--DSDVLVIECNLRASRSFPFVSKTMGVDFIEAATKVMMGAPY 182
                 789***********************************************....8***********************6.78888888888888788********************************************99..599********************************999875 PP

>> PF13535.1  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.7   0.0   1.6e-20   3.2e-17      25     180 ..       3     155 ..       1     158 [. 0.91

  Alignments for each domain:
  == domain 1    score: 62.7 bits;  conditional E-value: 1.6e-20
   PF13535.1  25 vdseedleaaaeeigfpvvlKPadgagslgvrrvddaaeleaalealaaeveldegeflvEeyieG.deysvdglvldgelvflgisryletsppdfsdgaelgsvspseepleealrelaerllkalglkngvfHlEfkltpdGrlvliEinaRpg 180
                 +++ + + a+a+e+g+pv + P+   +     ++++++ lea+l+ + ++v  +++++++ ++++G +e+ +dg+ ++g +v++ ++++ e+   + +d + l +++++++  ++++++++++++k+l++  g+f+++f   +++ + +iE+n R  
  MMETSP1325-20131115|8935_1   3 LSDMQSALAFADEVGYPVLVRPSFVLSGAAMNVAHTPEALEAFLNLA-GDVS-GDKPVVMSKFVDGaREIEMDGVADNGVVVAAAVHEHIENAGVHSGDATLLLPPQDISSYTRSRVEDMTRKIAKELNI-SGPFNVQFLAKDSD-VLVIECNLRAS 155
                 567778899*********************************96555.5555.6***********99*************************9999988888888888999999****************.***********997.9********86 PP

>> PF02142.17  MGS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.8   0.0   1.9e-20   3.8e-17       1      95 []     267     356 ..     267     356 .. 0.89

  Alignments for each domain:
  == domain 1    score: 61.8 bits;  conditional E-value: 1.9e-20
                 HHHHHHHHHHH-GSEEEEEHHHHHHHHHTT---EEECCCCC---B-B..BHHHHHHHHHT-SEEEEE--SCHHHHH.HHHHHHHHHHHTT-EEES CS
  PF02142.17   1 elvelakklkelgfellATggTaklLkeagipvtevvektgegerlggrvsildlikegeidlvintlypfkatvakdgykirraaenidiplpt 95 
                 e+v  ++ l+elg+e++AT  T+++L+e+ +p    +  +  ++ ++g  ++  l++e+eidlvin++++ ++ +  ++y irr+ ++++ipl+t
  MMETSP1325-20131115|8935_1 267 EMVHSIHSLQELGYEIFATARTHAYLTEKHVP----ATLVRYPNGPEGSPEVSSLLREKEIDLVINLPTSESKEID-NNYLIRRTSVDFGIPLLT 356
                 689999**************************....444444444566667************************8.****************98 PP

>> PF02222.17  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   1.4e-11   2.7e-08      14     160 ..       3     153 ..       1     157 [. 0.88

  Alignments for each domain:
  == domain 1    score: 33.2 bits;  conditional E-value: 1.4e-11
                 EEHH.HH----------EEEEES-------------------------....---EEEEEE----SEEEEE---B-----B----EEEEEE----....EEEEEEEEE....--HHHHHHHHHHHHHTT-----EEEEEE-----.EEEEEEESS CS
  PF02222.17  14 veskeeleeaveelglpvvvKarrlgydGkGqsvvkseeeleqaleal....keeklivEefvpfekElsvlvvRsveGevafypvvetvqkdgi....lrlsvapaevsekqqkkaeeiakkiveeLggvGvlavElFvledgeellvnElapR 160
                 +++ +++ ++++e+g+pv+v+ +    +G    v++++e le++l+ +    +++++++ +fv+  +E+ + +v   +G v++  v+e++++ g+      l + p+++s+    ++e++++ki++eL++ G + v + ++ d++ +lv E   R
  MMETSP1325-20131115|8935_1   3 LSDMQSALAFADEVGYPVLVR-PSFVLSGAAMNVAHTPEALEAFLNLAgdvsGDKPVVMSKFVDGAREIEMDGVA-DNGVVVAAAVHEHIENAGVhsgdATLLLPPQDISSYTRSRVEDMTRKIAKELNISGPFNVQFLAK-DSD-VLVIECNLR 153
                 56677888999**********.999*********************99999999***************999996.5899**********987651111678899*******************************97666.777.999988777 PP

>> PF07478.8  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.3e-09   2.5e-06      26     171 ..      10     150 ..       3     169 .. 0.87

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 1.3e-09
                 .HHHHH----EEEEE---------EEESSGGGHHHHHHHHHTT..-SSEEEEE--.---EEEE.--EE---EE------EE---SSS-HHHHH..C-TT-EE-SS----HHHHHHHHHHHHHHHHHTT-----EEEEE--.----EEEEE CS
   PF07478.8  26 ekvveklgypvfvKpareGSSvGiskveseeeleeaieeafqy..dekvlveeai.egreiev.avlgneklevsevgeivlkkgfydyeekyelidssaeievpakleeeveekikelakkaykalglkGlaRvDfflteegeivlnEv 171
                  ++  ++gypv+v+p+   S   ++  ++ e+le++++ a     d+ v++ +++  +reie+ +v +n+ +++++v+e++ + g+           +++ +  p ++++  +++++++  k+ k l+++G   v f+ ++++ +v+ E 
  MMETSP1325-20131115|8935_1  10 LAFADEVGYPVLVRPSFVLSGAAMNVAHTPEALEAFLNLAGDVsgDKPVVMSKFVdGAREIEMdGVADNGVVVAAAVHEHIENAGVHSG--------DATLLLPPQDISSYTRSRVEDMTRKIAKELNISGPFNVQFLAKDSDVLVI-EC 150
                 577899*********************************975433899*******889****97899**************99998654........55668899******************************999887666554.55 PP

>> PF02655.9  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.4e-05      0.11      32     158 ..      18     154 ..       8     157 .. 0.64
   2 ?   -1.9   0.0       1.2   2.3e+03       7      22 ..     240     255 ..     234     270 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.4e-05
   PF02655.9  32 kklvvKprdGaGgesvrvvenkeeaeealeele........vvqefieG.eplSvsvlsdgekvlllavnrqlieleekkfvyaGnlt......pietelkeelvelaeevvealegllGyvGvDlvlkdeepyviEvNPRl 158
                 +++ v p +   g ++ v++  e+ e++l+           v+++f++G +++ ++ ++d+ +v++ a  +++ie+     v +G  t      +i    +++++++ +++ ++l ++ G + v ++ kd++  viE N R 
  MMETSP1325-20131115|8935_1  18 YPVLVRPSFVLSGAAMNVAHTPEALEAFLNLAGdvsgdkpvVMSKFVDGaREIEMDGVADN-GVVVAAAVHEHIEN---AGVHSGDATlllppqDISSYTRSRVEDMTRKIAKEL-NISGPFNVQFLAKDSDVLVIECNLRA 154
                 5555666665555555555555555555543335556666677777777345667777755.44444444445544...35555555422221134444589999999*******.***********************885 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 1.2
   PF02655.9   7 tykaLkeagvkvPskl 22 
                 + kaL+  g+k+P+k 
  MMETSP1325-20131115|8935_1 240 FLKALMSTGFKMPEKS 255
                 56999********433 PP

>> PF08443.6  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.6e-05      0.09      27     182 ..       6     169 ..       2     177 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.6e-05
   PF08443.6  27 eedaekliekikqfPvvvKsvfgsqGikvvlaedkqsleqlleafkql..keailvQefIeeaenrdiRvlVvgdevvaalervskeGdfrsNlarGgva...eklqls....eeeeelaikaaeamel.dvlgvDileskrgllvlEvN..ssvglkkiektlgini 182
                  ++a ++++++ ++Pv+v+++f   G  + +a+++++le  l+    +   +++++ +f++ a + ++  +  ++ vvaa      e    + ++ G ++    + ++s    + +e+++ k+a+ ++      v  l ++  +lv+E N  +s  +  ++kt+g++ 
  MMETSP1325-20131115|8935_1   6 MQSALAFADEV-GYPVLVRPSFVLSGAAMNVAHTPEALEAFLNLAGDVsgDKPVVMSKFVDGAREIEMDGVADNGVVVAAAVHEHIE---NAGVHSGDATlllPPQDISsytrSRVEDMTRKIAKELNIsGPFNVQFLAKDSDVLVIECNlrASRSFPFVSKTMGVDF 169
                 578889*****.****************************99876554126788*******99999998877777777765444333...466777777633334455411115678888888877665146789999999999999988667888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.81u 0.39s 00:00:01.20 Elapsed: 00:00:00.59
# Mc/sec: 1908.96
//
Query:       MMETSP1325-20131115|8937_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-19   66.3   2.1    3.6e-06   26.5   0.1    4.7  5  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.052   13.1   0.0       0.27   10.7   0.0    2.2  2  PF08662.6  Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.2   8.3e+03       5      11 ..      33      39 ..      31      41 .. 0.80
   2 !   26.5   0.1   5.2e-10   3.6e-06       5      39 .]      64      98 ..      61      98 .. 0.95
   3 !    7.0   0.0   0.00076       5.2      11      31 ..     114     134 ..     109     136 .. 0.90
   4 !   16.4   0.0   7.8e-07    0.0053       3      35 ..     150     183 ..     148     187 .. 0.89
   5 !   12.5   0.1   1.4e-05     0.093       5      23 ..     195     213 .]     192     213 .] 0.91

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1.2
                EEEESSS CS
  PF00400.27  5 atlrgHt 11
                +t+++H 
  MMETSP1325-20131115|8937_1 33 TTFYAHP 39
                799**95 PP

  == domain 2    score: 26.5 bits;  conditional E-value: 5.2e-10
                EEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  5 atlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 ++rgH++pVt  +f+p+g ++as+ + g++r+W+
  MMETSP1325-20131115|8937_1 64 FIYRGHNAPVTVAKFAPNGFWVASADETGKCRIWS 98
                589*******************************7 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.00076
                 SSSEEEEEEESSSTEEEEEET CS
  PF00400.27  11 tspVtcvafspdgpllasgSr 31 
                 ++p+ +++++p++++l++ ++
  MMETSP1325-20131115|8937_1 114 SGPIKDLDWDPESKRLVCVGD 134
                 589*************99875 PP

  == domain 4    score: 16.4 bits;  conditional E-value: 7.8e-07
                 EEEEEESSSSSEEEEEEESS.STEEEEEETTSEE CS
  PF00400.27   3 ckatlrgHtspVtcvafspd.gpllasgSrDgti 35 
                  + + +gHt+ +t +++ p+ + ++ +g++D++ 
  MMETSP1325-20131115|8937_1 150 TVGEMTGHTKRITTCSYKPSrPFRIMTGGEDNKT 183
                 57789**************************975 PP

  == domain 5    score: 12.5 bits;  conditional E-value: 1.4e-05
                 EEEESSSSSEEEEEEESSS CS
  PF00400.27   5 atlrgHtspVtcvafspdg 23 
                 +t + H++ V++v+fspdg
  MMETSP1325-20131115|8937_1 195 HTNTDHSKEVWSVRFSPDG 213
                 7889*************95 PP

>> PF08662.6  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.37   2.5e+03     145     164 ..      72      91 ..      58     101 .. 0.72
   2 ?   10.7   0.0     4e-05      0.27      59     116 ..     114     174 ..     100     213 .] 0.73

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.37
   PF08662.6 145 natlvewspdgryvlTatts 164
                   t+ ++ p+g +v++a  +
  MMETSP1325-20131115|8937_1  72 PVTVAKFAPNGFWVASADET 91 
                 45778888888888887655 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 4e-05
   PF08662.6  59 egpihdvaWspkskefaviyGkmpakislfdlk.vnvisklk..ekkrNtifwspqgrlvl 116
                  gpi+d+ W+p+sk+++++    p +++ f  + +n + ++   +k+  t  ++p+  + +
  MMETSP1325-20131115|8937_1 114 SGPIKDLDWDPESKRLVCVGDGKPLSAKCFMWDtGNTVGEMTghTKRITTCSYKPSRPFRI 174
                 699************9988877787777666633555555441134445666666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.32s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1109.62
//
Query:       MMETSP1325-20131115|8938_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|8939_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 489.05
//
Query:       MMETSP1325-20131115|8940_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-10   40.2   0.0    2.6e-10   39.8   0.0    1.2  1  PF00782.15 Dual specificity phosphatase, catalytic domain
  ------ inclusion threshold ------
      0.026   13.7   0.0      0.033   13.4   0.0    1.3  1  PF00102.22 Protein-tyrosine phosphatase
      0.076   12.6   1.0        0.1   12.2   0.7    1.2  1  PF10099.4  Anti-sigma-K factor rskA
       0.22   11.6   0.8        1.1    9.4   0.0    2.0  2  PF13350.1  Tyrosine phosphatase family
        3.2    6.9   5.9        8.5    5.5   4.1    1.7  1  PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.0   9.5e-14   2.6e-10      75     128 ..      46      99 ..      19     103 .. 0.91

  Alignments for each domain:
  == domain 1    score: 39.8 bits;  conditional E-value: 9.5e-14
                 -EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHS.TT-SS-STTHHHHH CS
  PF00782.15  75 kvlVHCqaGisRSatliiaYlmktknlslneAyefvkerr.skispnagflrqLl 128
                  v+VHC  G +R++ li+ Yl ++++++++ A++ + e r + i +  +fl +L+
  MMETSP1325-20131115|8940_1  46 LVAVHCHYGFNRTGFLICSYLVEEEGWDVEYAISQFAEVRtPGIKHA-HFLEELR 99 
                 69**************************************8888887.9999886 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.2e-05     0.033     166     192 ..      33      66 ..       4      92 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.2e-05
                 S.......STTSS-EEEES------HHHHHHHHH CS
  PF00102.22 166 k.......taksgpvvVhCsaGvgRtgtfvaldi 192
                         +  +  v VhC+ G +Rtg +++  +
  MMETSP1325-20131115|8940_1  33 YfesapliDGARPLVAVHCHYGFNRTGFLICSYL 66 
                 2333467767778899************998655 PP

>> PF10099.4  Anti-sigma-K factor rskA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.7   3.7e-05       0.1       7      54 ..      96     150 ..      91     157 .. 0.45

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.7e-05
   PF10099.4   7 drIearlfaepa.....aaaaarsarlwr.rlrrWrglal.aaaAaaavlalall 54 
                 +++++r +++++     +++aa  ++l+  + +r+ gl++ +a+Aaaa++ ++l+
  MMETSP1325-20131115|8940_1  96 EELRRRYKGKAPsrqelTESAAVGRSLRVhSEGRRTGLVAaVAVAAAAAACVVLV 150
                 5566666666665555533333333333344555555554422222222222222 PP

>> PF13350.1  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00039       1.1     122     143 ..      41      63 ..      19      82 .. 0.72
   2 ?    0.6   0.1       0.2   5.4e+02     137     149 ..     130     142 ..      92     146 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00039
   PF13350.1 122 eeeg.pvlfHCtaGKDRTGvvaa 143
                 + ++  v +HC  G  RTG+++ 
  MMETSP1325-20131115|8940_1  41 DGARpLVAVHCHYGFNRTGFLIC 63 
                 344325779**********9875 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.2
   PF13350.1 137 RTGvvaalllsll 149
                 RTG+vaa+ ++++
  MMETSP1325-20131115|8940_1 130 RTGLVAAVAVAAA 142
                 9****99988776 PP

>> PF10399.4  Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   4.1    0.0031       8.5      11      32 ..     129     149 ..     123     151 .. 0.75

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0031
                 -HHHHHHHHHH---------HH CS
   PF10399.4  11 RRDFLylATaavgaVGaaaaaw 32 
                 RR  L +A++av+a  aa+++ 
  MMETSP1325-20131115|8940_1 129 RRTGL-VAAVAVAAAAAACVVL 149
                 66666.8999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       557  (0.0407402); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 757.25
//
Query:       MMETSP1325-20131115|8942_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 248.35
//
Query:       MMETSP1325-20131115|8943_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 361.80
//
Query:       MMETSP1325-20131115|8945_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 464.60
//
Query:       MMETSP1325-20131115|8946_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.40s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 206.09
//
Query:       MMETSP1325-20131115|8944_1  [L=422]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-07   29.2   0.0    1.4e-06   27.8   0.0    1.8  1  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
       0.12   11.8   0.1       0.22   10.9   0.1    1.4  1  PF04810.10 Sec23/Sec24 zinc finger
       0.18   10.9   0.0       0.29   10.2   0.0    1.2  1  PF08638.6  Mediator complex subunit MED14
       0.19   10.7   2.0       0.33    9.9   1.4    1.4  1  PF00641.13 Zn-finger in Ran binding protein and others
        7.3    6.5   8.7         19    5.1   6.0    1.6  1  PF06112.6  Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   5.1e-10   1.4e-06       2      37 .]     298     333 ..     297     333 .. 0.94

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 5.1e-10
                 THHHHHHHHH----HHHHHHHHHHTTTSHHHHHHHH CS
  PF00627.26   2 deeaiqqLreMGfsreeakkALratnnnvErAveyL 37 
                 +++ +++L++MGf++   k AL+++nn+v  A++ L
  MMETSP1325-20131115|8944_1 298 SAAELAMLCDMGFEETLSKAALKRSNNDVTGAIDIL 333
                 567799***************************988 PP

>> PF04810.10  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   8.1e-05      0.22      22      36 ..     395     409 ..     391     412 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8.1e-05
  PF04810.10  22 gkrWtCnlCgtrNel 36 
                 + rW+C  Cg++N+l
  MMETSP1325-20131115|8944_1 395 NLRWKCKVCGQMNPL 409
                 679**********97 PP

>> PF08638.6  Mediator complex subunit MED14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0    0.0001      0.29      94     140 ..     305     355 ..     299     359 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0001
   PF08638.6  94 lkdl..kedlaqAkl..pnpdLktAleVLstGrlpslpdlgylppkpltpk 140
                 l d+  +e+l++A l   n d++ A+++L++G++ + +d+ y   +pl p 
  MMETSP1325-20131115|8944_1 305 LCDMgfEETLSKAALkrSNNDVTGAIDILMNGDVGDAMDDTYSDMPPLAPA 355
                 55555567777775522699***********************99999876 PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4   0.00012      0.33       3      21 ..     396     414 ..     394     421 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00012
  PF00641.13   3 gdWdCskClvqNfawstkC 21 
                  +W+C++C+ +N++    C
  MMETSP1325-20131115|8944_1 396 LRWKCKVCGQMNPLIVEGC 414
                 58**********9755555 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   6.0    0.0069        19      84     132 ..     215     279 ..     200     283 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0069
   PF06112.6  84 tsssigsalsassssasgvpggaa................lSsssvsalsSgpsslsssssesss 132
                 t ++ g+++sa+ +s+++ p++++                +S++s+s  +S+ +s +ss s s+s
  MMETSP1325-20131115|8944_1 215 TTADGGGGGSANGESGVATPTKSGglirqlqdmsqkipspPSGGSASVSTSTTTSATSSASPSIS 279
                 5667789999999999999988889**99999999999888888888888888888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       584  (0.042715); expected 273.4 (0.02)
Passed bias filter:                      445  (0.0325483); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.39s 00:00:01.18 Elapsed: 00:00:00.53
# Mc/sec: 1908.04
//
Query:       MMETSP1325-20131115|8948_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.3e-14   50.8   0.1    5.5e-14   50.8   0.1    1.0  1  PF09773.4 Meckelin (Transmembrane protein 67)


Domain annotation for each model (and alignments):
>> PF09773.4  Meckelin (Transmembrane protein 67)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   0.1   4.1e-18   5.5e-14      38     137 ..      22     124 ..       8     131 .] 0.81

  Alignments for each domain:
  == domain 1    score: 50.8 bits;  conditional E-value: 4.1e-18
   PF09773.4  38 sttsttlslissessgelglkiasevflsylqdaav.cltl...snltaCqlLaNlCVlnmfdlessdackLfltvfsskaaladsvsevrrslPwLfygketa 137
                 st  +     + +ss e +l+i+s v++++ ++a + c+++   +n + Cq LaNlCV++m+  ++ + c Lf+++++++   + s   + ++lPwL y +  +
  MMETSP1325-20131115|8948_1  22 STIMFYKLQLDADSSPESELEIESLVMKHHFLNASTnCFYYngpENVVNCQTLANLCVMHMYFPDA-EVCDLFEDILDKRSENERSQDGWVETLPWLRYVETST 124
                 34444445567788899******************9888874445899******************.9************999**************8876544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 682.44
//
Query:       MMETSP1325-20131115|8949_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00021   20.4   0.0    0.00037   19.6   0.0    1.4  1  PF00069.20 Protein kinase domain
     0.0019   17.2   0.5      0.003   16.6   0.0    1.6  2  PF07714.12 Protein tyrosine kinase
     0.0054   15.4   3.7     0.0072   14.9   2.6    1.2  1  PF10498.4  Intra-flagellar transport protein 57
  ------ inclusion threshold ------
      0.026   14.2   7.1       0.37   10.4   0.6    2.2  2  PF06009.7  Laminin Domain II
      0.029   13.8   5.2      0.038   13.4   3.6    1.1  1  PF03194.10 LUC7 N_terminus
      0.054   12.4   0.2      0.076   11.9   0.1    1.3  1  PF11262.3  Transcription factor/nuclear export subunit protein 2
      0.072   11.4   3.3      0.087   11.1   2.3    1.1  1  PF13166.1  AAA domain
      0.079   12.6   0.3       0.14   11.8   0.2    1.5  1  PF03564.10 Protein of unknown function (DUF1759)
       0.14   11.9   1.9       0.42   10.4   1.3    1.8  1  PF04899.7  MbeD/MobD like
       0.15   11.9   6.8       0.22   11.4   2.9    2.1  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain
        1.2    7.8  10.6        1.7    7.3   7.4    1.1  1  PF14362.1  Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0     3e-07   0.00037       5      66 ..     192     255 ..     189     256 .] 0.93

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 3e-07
                 EEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH....HHHHHHHHH-TTB--EEEE CS
  PF00069.20   5 eklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr....ElkilkklsHpnivkllev 66 
                 e   +G+fG+V ka+ ++++  v++K++  +    +++++ v+    El+i+ +l++p +v+++++
  MMETSP1325-20131115|8949_1 192 EPFARGGFGVVHKATYQGDQ--VVLKKIPMQGITITEREKIVKgferELAIMIELRSPRVVNVFGI 255
                 56789**************9..***************9999889*****************99876 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       3.5   4.3e+03      12      51 ..      58      96 ..      52      99 .. 0.49
   2 !   16.6   0.0   2.4e-06     0.003       6      69 ..     193     255 ..     189     256 .] 0.76

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 3.5
                ---EEEEEEETTTTSSEEEEEEEEE.CTTSBHHHHHHHHHH CS
  PF07714.12 12 fGkVvegtlkgekekkevkVavKtl.kesaeeeekeeflee 51
                +++V eg  +  + +++ +   K    ++ ++++ e++ +e
  MMETSP1325-20131115|8949_1 58 YAQVKEGFER--EAQERARAFEKLTdAQDRTNQSVEQLKSE 96
                4555555555..44444444445552223334445555555 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 2.4e-06
                 EE-------EEEEEEETTTTSSEEEEEEEEE.CT....TSBHHHHHHHHHHHHHHHHT-BTTB--BEEE CS
  PF07714.12   6 klGeGafGkVvegtlkgekekkevkVavKtl.ke....saeeeekeefleeakimkklkhpnivkllgv 69 
                    +G fG V+++t++        +V++K++  +    +++e+  + f +e++im +l+ p++v++ g+
  MMETSP1325-20131115|8949_1 193 PFARGGFGVVHKATYQ------GDQVVLKKIpMQgitiTEREKIVKGFERELAIMIELRSPRVVNVFGI 255
                 5679************......5556666663443322555555788999****************997 PP

>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   2.6   5.8e-06    0.0072     223     316 ..      70     163 ..      54     181 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 5.8e-06
   PF10498.4 223 eqmkqlkkaieksleelkqsLkklsqdlskalekiekrEkqlnnqleelvqeykeareelsevqekyn.qlsksvsektaelseiseeleqvkqe 316
                 +++    ++++++   ++qs ++l++++++a   ++  E +ln++++el +e ++++++++ev  + + ++ ++v e +a+ +e +  l+q+  +
  MMETSP1325-20131115|8949_1  70 QERARAFEKLTDAQDRTNQSVEQLKSEIERASGAVAAMEATLNERFDELFAEGRANAAKITEVMLESEdRVIAKVDETNAKVDETNALLRQKV-Q 163
                 445555567999999*********************************************999866651556777777777777666665533.3 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.6    0.0003      0.37      19      75 ..      62     118 ..      51     133 .. 0.84
   2 ?    6.9   0.9    0.0037       4.6      27      75 ..     138     189 ..     120     191 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0003
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7  19 legistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkL 75 
                 +eg + + ++     +kl +  ++tn+ v++  + ++ a+ +v ++e ++++ +d L
  MMETSP1325-20131115|8949_1  62 KEGFEREAQERARAFEKLTDAQDRTNQSVEQLKSEIERASGAVAAMEATLNERFDEL 118
                 455566666666778888888899*************************99888765 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0037
                 XXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7  27 entkaklsklngsveetnekvk...sankavrdarrsvrkleklapqlldkL 75 
                 +++ ak+ ++n++v+etn++++   +  ++ ++ar+ ++   +  ++  d++
  MMETSP1325-20131115|8949_1 138 DRVIAKVDETNAKVDETNALLRqkvQVEQGRALARQDMSRAMQSFEVECDRI 189
                 6677899999999999999999555566677788888888777777776666 PP

>> PF03194.10  LUC7 N_terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.6     3e-05     0.038      63     182 ..      60     178 ..      55     206 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3e-05
  PF03194.10  63 klrkdYerasksqdlkkye..eealealevlvhdvdrkidkakqrleetqeeqtkeaaelkaeelaeleeeinkllkeaeelgeegkvdeaqklmeeveelkekkeeleqqadeaknaapss 182
                 ++++ +er++++++   +e  ++a +  ++ v+++  +i++a  + + ++ + +++ +el ae  a+ +++i +++ e e+  ++ kvde+++ ++e ++l ++k+++eq    a++ +   
  MMETSP1325-20131115|8949_1  60 QVKEGFEREAQERARA-FEklTDAQDRTNQSVEQLKSEIERASGAVAAMEATLNERFDELFAEGRAN-AAKITEVMLESEDRVIA-KVDETNAKVDETNALLRQKVQVEQGRALARQDMSRA 178
                 789999*999999888.55227********************************9999977776666.56677777777777665.7***********************877777666554 PP

>> PF11262.3  Transcription factor/nuclear export subunit protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   6.1e-05     0.076      26     100 ..      55     130 ..      33     144 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.1e-05
   PF11262.3  26 keqYdkeiekleseikeskkakiekkkrelkriknrikkLeeekkehiehtekiksrLkeekkswf..kskndekvg 100
                  e Y + +e +e+e++e    ++ek ++ ++r ++++++L++e ++ + +++ ++  L+e++++ f   ++n +k++
  MMETSP1325-20131115|8949_1  55 SEGYAQVKEGFEREAQE-RARAFEKLTDAQDRTNQSVEQLKSEIERASGAVAAMEATLNERFDELFaeGRANAAKIT 130
                 68899999999***999.888899****************************************9955445555554 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.3     7e-05     0.087     303     388 ..      69     160 ..      34     192 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 7e-05
   PF13166.1 303 lleelesilseekensefkedveelkaelealeeeleklekaleeKlkdpfssle..lesiadei....eeinelvdkinelirkhNekidn 388
                 + e+  ++ +  + ++ +++ ve+lk+e+e  + ++ ++e  l+e+ +++f +      +i++ +    +++ ++vd+ n+++++ N   ++
  MMETSP1325-20131115|8949_1  69 AQERARAFEKLTDAQDRTNQSVEQLKSEIERASGAVAAMEATLNERFDELFAEGRanAAKITEVMleseDRVIAKVDETNAKVDETNALLRQ 160
                 33334444444666777888899999999999999999999999999999985440033333333332345555555555555555553322 PP

>> PF03564.10  Protein of unknown function (DUF1759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   0.00011      0.14      51     121 ..      49     119 ..      25     145 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00011
  PF03564.10  51 ltaenYevaveaLkerYdnsekiirslleklmklpstkndsvsqlkelvdelneiirqLeklgeeaddtil 121
                 lt++         ke ++++++ ++  +ekl++ ++ +n+sv+qlk+ ++ +   + ++e+  +e  d ++
  MMETSP1325-20131115|8949_1  49 LTSAVVSEGYAQVKEGFEREAQERARAFEKLTDAQDRTNQSVEQLKSEIERASGAVAAMEATLNERFDELF 119
                 37777777788899**************************************9999999987666666665 PP

>> PF04899.7  MbeD/MobD like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.3   0.00033      0.42      14      69 ..      40     101 ..      32     102 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00033
   PF04899.7  14 qLQqdYeqrlqe..Wesafaelqrmfeltqrena....aLseqvtgLsqQVesLseqvrRls 69 
                 qL ++Y+q l      + +a+ ++ fe +++e+a    +L    ++  q Ve+L  +++R s
  MMETSP1325-20131115|8949_1  40 QLLEHYMQMLTSavVSEGYAQVKEGFEREAQERArafeKLTDAQDRTNQSVEQLKSEIERAS 101
                 677899998876224788****************88888888888999***********987 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.9   0.00018      0.22      10      87 ..      57     133 ..      48     151 .. 0.84
   2 ?    7.0   0.5    0.0041       5.1      41      92 ..     111     160 ..     109     172 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00018
                 -HHHHHHHHHH-.TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTT...HHCCCHHHHHHHHHHHHHHHH CS
  PF02403.17  10 npeavkeklkkRgedkedvdelleldeerrelqveleelqaerNelskeIgkakkkk.edaeeliaevkelkeelkale 87 
                   + vke  + R e++e   ++ +l +++ ++++ +e+l++e  ++s +++ + +   e  +el ae++++++++ ++ 
  MMETSP1325-20131115|8949_1  57 GYAQVKEGFE-R-EAQERARAFEKLTDAQDRTNQSVEQLKSEIERASGAVAAMEATLnERFDELFAEGRANAAKITEVM 133
                 5667777775.6.68899999******************************999988899************9998865 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0041
                 HHHHHHHHHHHHHHHHHHGGGTTT..HHCCCHHHHHHHHHHHHHHHHHHHHH CS
  PF02403.17  41 lqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelke 92 
                 l+ +++el ae  + +++I + + +    +++ia+v+e ++++++ +a l++
  MMETSP1325-20131115|8949_1 111 LNERFDELFAEGRANAAKITEVMLES--EDRVIAKVDETNAKVDETNALLRQ 160
                 678999999**************976..5689**************998887 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   7.4    0.0014       1.7     113     228 ..      60     175 ..      55     192 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0014
   PF14362.1 113 elkekqqeeqaaaqaqvaaslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaelean...krkaaleeeraak 228
                 ++ke  ++e+++ ++++++ l+++  + ++ +++l++e++ a+ +v+a+e+++++  +     g+a + ++++   e  d+  a++++++a++d+++a l+++   +  +  + +r+++
  MMETSP1325-20131115|8949_1  60 QVKEGFEREAQERARAFEK-LTDAQDRTNQSVEQLKSEIERASGAVAAMEATLNERFDELFAEGRANAAKITEVMLESEDRVIAKVDETNAKVDETNALLRQKvqvE--QGRALARQDM 175
                 6677777777777888887.999999999**********************99988887678899999999999999999999************999999777442..3333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1303  (0.0953043); expected 273.4 (0.02)
Passed bias filter:                      700  (0.0511995); expected 273.4 (0.02)
Passed Vit filter:                        95  (0.00694851); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.51
# Mc/sec: 1202.88
//
Query:       MMETSP1325-20131115|8951_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 415.69
//
Query:       MMETSP1325-20131115|8947_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 973.84
//
Query:       MMETSP1325-20131115|8954_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 1330.22
//
Query:       MMETSP1325-20131115|8955_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-11   42.6   0.2    8.8e-11   42.0   0.2    1.3  1  PF12697.2  Alpha/beta hydrolase family
    5.4e-06   26.1   0.0    1.1e-05   25.0   0.0    1.5  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.025   14.0   0.0    1.4  1  PF00561.15 alpha/beta hydrolase fold
      0.086   12.0   0.0       0.13   11.4   0.0    1.3  1  PF00698.16 Acyl transferase domain


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   0.2   2.6e-14   8.8e-11       1     103 [.     168     269 ..     168     282 .] 0.87

  Alignments for each domain:
  == domain 1    score: 42.0 bits;  conditional E-value: 2.6e-14
                 EEE------------HHHHHHTTTSEEEEE-----------S...S--HHHHHHHHHHHHHH--.--EEEE--------HHHHHH----...EEEEEEE------ CS
   PF12697.2   1 vvllHGlggsaeswrplaeaLaagyrvvapDlpGhGrSdrppdydpdtledlaadlaalldalglrpvvlvGHSlGgavalaaaarrpd..lvrglvlidppgpl 103
                 +v++HG g + +++ +l+ a+  +++v+++++p          +   ++ d +a + + l++ g  ++ +vGHSlG+ +++ ++++r    lv +  l+dp+ +l
  MMETSP1325-20131115|8955_1 168 IVFIHGIGIGLTQYLKLIAAFPPDVPVYLVSWPHVSMQIQ---EKVPSITDNVATISESLRRDGVSKACFVGHSLGTTAIAWMLHDRNAapLVGSACLMDPVTFL 269
                 8********************************9855443...346689****************************99999999877789***********964 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   3.2e-09   1.1e-05       1      90 [.     167     265 ..     167     278 .. 0.71

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 3.2e-09
   PF12695.2   1 lvvlvhGaggdssayeplaealakrgfavvavdlpghgas..egaa.......aakrvlaadll..dleriilvGhSlGGgvalelag.rd..drvkglvllap 90 
                 ++v++hG g   ++y +l  a+  + ++v++v +p+ +    e+++       + ++ l       ++++ ++vGhSlG+++++++   r+  + v +++l++p
  MMETSP1325-20131115|8955_1 167 PIVFIHGIGIGLTQYLKLIAAFPPD-VPVYLVSWPHVSMQiqEKVPsitdnvaTISESL----RrdGVSKACFVGHSLGTTAIAWMLHdRNaaPLVGSACLMDP 265
                 59*********************98.******999998875533334443222333333....2459************9977665551445455666666666 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   7.3e-06     0.025      42      89 ..     228     274 ..     215     280 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 7.3e-06
                 TSSSEEEEE-B---HHHHHHHHHCGG..GEEEEEEESB--HHSHCSHSTT CS
  PF00561.15  42 glkkltlvGhSmGGmialayaaeypd..rvkamvllgtvavlsdglssdv 89 
                 g+ k+++vGhS+G++  ++++ +  +   v ++ l+ +v   +++l ++ 
  MMETSP1325-20131115|8955_1 228 GVSKACFVGHSLGTTAIAWMLHDRNAapLVGSACLMDPV---TFLLIDPA 274
                 899************999999999999999999999995...77776665 PP

>> PF00698.16  Acyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.8e-05      0.13      73      99 ..     219     245 ..     171     250 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.8e-05
                 HHHHHHHH---TT-EEE------HHHH CS
  PF00698.16  73 alaellkskGvtpaavvGHSlGEiAaa 99 
                    e l+  Gv  a +vGHSlG  A a
  MMETSP1325-20131115|8955_1 219 TISESLRRDGVSKACFVGHSLGTTAIA 245
                 456899****************88865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1206.74
//
Query:       MMETSP1325-20131115|8960_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.8   2.7       0.15   11.4   1.9    1.2  1  PF03597.10 Cytochrome oxidase maturation protein cbb3-type


Domain annotation for each model (and alignments):
>> PF03597.10  Cytochrome oxidase maturation protein cbb3-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.9   1.1e-05      0.15       3      26 ..      24      47 ..      22      49 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.1e-05
  PF03597.10  3 LylLIpislllgalglaaFlWavk 26
                L++L++  l+ ga++laaF W+ k
  MMETSP1325-20131115|8960_1 24 LIMLLGFLLFAGAIALAAFKWGRK 47
                899******************977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.44s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 385.30
//
Query:       MMETSP1325-20131115|8961_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.31s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 660.33
//
Query:       MMETSP1325-20131115|8962_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 514.96
//
Query:       MMETSP1325-20131115|8958_1  [L=407]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-07   31.0   0.0    3.7e-07   29.9   0.0    1.6  1  PF03567.9 Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF03567.9  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   2.7e-11   3.7e-07      59     253 .]     187     398 ..     152     398 .. 0.74

  Alignments for each domain:
  == domain 1    score: 29.9 bits;  conditional E-value: 2.7e-11
   PF03567.9  59 glfadltelssteipkrld.kyfkfifvRdPfeRllSayrnkcvgdkr..........rgatwcgrlivckgr......lpacyegddwsgvsfeeFleclsnla..perer...nnrhwapacdlctrmla...dydlvgcyetleedlnailrllallnlknvavfgltefprktqtanttrrsnstrasevevdlseklrqrleelYelDfelFeya 253
                  l+ ++  +ss++ ++ ++  y  ++ vR+P++R+lSa    ++++ +             +w g + + k++      ++ +    +  gv+++ + +++s      ++++     +h+ ++ d+ t+      d+dlv+ +e+ ++   ++++ll++ + +n ++   +   +    +   + s++++ +    + +++l++++  +Y  Df  F+y+
  MMETSP1325-20131115|8958_1 187 YLWCEYGTFSSESTDTSVTsGYSTVAAVRNPIKRFLSAMGEELERSVNyycpsgyctfDNDYWQGDTTLDKYEhqttwyRYVSDA--HDTGVDMTLLPKIISAFVhdVKCNYytyASEHFTTQADFVTQNSGeaaDLDLVMQLEDVDSGFTELANLLGHTESGNCDLSDSNTADD----KPGGIPSENEMMKVL--EADDDLMREICLMYAQDFICFDYD 398
                 566677888888887777779******************9999876656788877777777888888888888877555333333..33444444444444332222456666668889*999997655532345************************9999999944444444....666675555555555..78*********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       483  (0.0353277); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.38s 00:00:01.12 Elapsed: 00:00:00.55
# Mc/sec: 1773.30
//
Query:       MMETSP1325-20131115|8963_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.054   13.1   0.4      0.099   12.3   0.2    1.4  1  PF05347.10 Complex 1 protein (LYR family)


Domain annotation for each model (and alignments):
>> PF05347.10  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   7.2e-06     0.099       3      30 ..       4      32 ..       2      35 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 7.2e-06
  PF05347.10  3 vLsLYRalLRaarkfpdyn.areyirrri 30
                v  LYR lL++ar+  ++   r+++ r++
  MMETSP1325-20131115|8963_1  4 VRTLYRTLLKSARRADNDPlLRAELSRHA 32
                668*********88888877888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 498.07
//
Query:       MMETSP1325-20131115|8966_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   13.4   5.6      0.037   13.2   3.9    1.2  1  PF06920.8  Dedicator of cytokinesis
      0.033   13.8   6.4      0.041   13.5   4.5    1.2  1  PF03105.14 SPX domain
      0.035   12.5   5.6      0.038   12.4   3.9    1.0  1  PF04375.9  HemX
      0.039   13.7   0.5       0.07   12.9   0.3    1.5  2  PF04003.7  Dip2/Utp12 Family
       0.11   13.0   2.5       0.16   12.5   1.7    1.2  1  PF13767.1  Domain of unknown function (DUF4168)
       0.14   11.9   1.3       0.16   11.7   0.9    1.1  1  PF08389.7  Exportin 1-like protein
       0.16   11.6   8.3       0.16   11.6   2.5    2.1  2  PF07544.8  RNA polymerase II transcription mediator complex subunit 9
       0.16   10.2   7.7       0.19   10.0   5.3    1.0  1  PF03961.8  Protein of unknown function (DUF342)
        0.2   11.1  10.0       0.26   10.7   6.9    1.2  1  PF04156.9  IncA protein
       0.42   10.5   9.5       0.61    9.9   6.6    1.3  1  PF07798.6  Protein of unknown function (DUF1640)
       0.59    8.0   6.0       0.61    7.9   4.1    1.0  1  PF07218.6  Rhoptry-associated protein 1 (RAP-1)
       0.71    9.3   6.4       0.64    9.4   3.4    1.6  2  PF03255.9  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
       0.97    8.4  12.8        1.1    8.3   8.9    1.0  1  PF02841.9  Guanylate-binding protein, C-terminal domain
        1.1    8.7   7.4        1.7    8.1   5.2    1.4  1  PF13010.1  Primase helical domain
        1.5    8.6  10.0          2    8.3   1.5    2.2  2  PF06667.7  Phage shock protein B
        1.6    8.6   6.4       0.32   10.8   0.8    2.0  2  PF14412.1  A nuclease family of the HNH/ENDO VII superfamily with conserved AHH
        1.9    6.1   7.2        2.1    5.9   5.0    1.0  1  PF10168.4  Nuclear pore component
        2.3    6.5   9.3        2.6    6.4   6.5    1.0  1  PF10079.4  Uncharacterized protein conserved in bacteria (DUF2317)
        4.1    6.4  11.6         12    4.9   6.9    1.9  2  PF11802.3  Centromere-associated protein K
        7.2    6.1   7.9        8.6    5.9   5.0    1.3  1  PF10107.4  Endonuclease related to archaeal Holliday junction resolvase
        7.2    6.4  17.7         14    5.4  12.3    1.5  1  PF03938.9  Outer membrane protein (OmpH-like)
        9.2    6.1  11.2         11    5.8   6.0    1.9  1  PF14282.1  FlxA-like protein
        9.7    5.9  11.0       0.86    9.3   1.1    2.6  3  PF00631.17 GGL domain


Domain annotation for each model (and alignments):
>> PF06920.8  Dedicator of cytokinesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   3.9   6.2e-05     0.037     121     175 ..      38      92 ..      22      95 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 6.2e-05
   PF06920.8 121 adkkqkekvnkLkkafkeflkileeaLelheklikeeqkelqeeleenfeelkee 175
                 ++ k +e+++ Lk+ +k + +++ +aL  +e+   ee++++q+ ++++ +el++e
  MMETSP1325-20131115|8966_1  38 SKDKMEEEIQALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRKE 92 
                 47788999***************************************99999987 PP

>> PF03105.14  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   4.5   6.8e-05     0.041      98     176 ..      23      81 ..       5     105 .. 0.48

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.8e-05
  PF03105.14  98 kaLdkElekvddFykekekeleerledLekqletlaerrtkksdeykarqeeqlyieaksffsdheamagpsnsvqake 176
                 k L++El k+d+F+++k  ++ee++++L+++l++ ++   +   + ++           +f +++ +m+        k+
  MMETSP1325-20131115|8966_1  23 KVLEEELHKLDNFKESKD-KMEEEIQALKDELKAQEDAHMQALTTSER-----------KFLEEKAKMQ--------KD 81 
                 456666666666655553.35556666666666555555544443333...........1111111111........11 PP

>> PF04375.9  HemX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   3.9   6.4e-05     0.038      51     115 ..      28      92 ..      10     104 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 6.4e-05
   PF04375.9  51 alqqveelqaklealaqelkqlakakeaqlkqeleklirdnqealeqlekkleqldksleelqdk 115
                 +l +++++++ ++++++e+++l+++++aq  ++++ l+  + + le   k +   dk+ +el+++
  MMETSP1325-20131115|8966_1  28 ELHKLDNFKESKDKMEEEIQALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRKE 92 
                 678899********************************************************975 PP

>> PF04003.7  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       3.3   1.9e+03      69      69 ..      37      37 ..      17      57 .. 0.52
   2 ?   12.9   0.3   0.00012      0.07      61     101 ..      58      98 ..      29     100 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 3.3
   PF04003.7 69 a 69
                +
  MMETSP1325-20131115|8966_1 37 E 37
                1 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 0.00012
   PF04003.7  61 saHgkalqaqapsllpaLrslqkvlrrrlkdlakllelnvy 101
                  aH++al+++++++l++  ++qk +++r+++l+k ++ +v+
  MMETSP1325-20131115|8966_1  58 DAHMQALTTSERKFLEEKAKMQKDMDKRADELRKEAKIQVQ 98 
                 69*********************************999876 PP

>> PF13767.1  Domain of unknown function (DUF4168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.7   0.00027      0.16       5      59 ..      31     104 ..      28     105 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00027
   PF13767.1   5 eitnyarAvlaieplrqeayeeiqaced....................pasiqalqreaqkeavkaIedngLtvs 59 
                 +++n+ ++  ++e++ q   +e++a+ed                    ++++ + ++e +kea+ ++ +ngL+ +
  MMETSP1325-20131115|8966_1  31 KLDNFKESKDKMEEEIQALKDELKAQEDahmqalttserkfleekakmQKDMDKRADELRKEAKIQV-QNGLDAD 104
                 799**********************766666666655555544444445555555555555555555.9999876 PP

>> PF08389.7  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.9   0.00027      0.16      49      96 ..      22      77 ..      12      97 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00027
                HHHHHHHHCC...S-TTTS-CCC.HHHHHHHCHHH....HHHHHHHHHHHHC-TT- CS
   PF08389.7 49 LkvlpeEiad...fsrskleqer.rnelkdllrsq....vqkilelllqileqsvs 96
                Lkvl eE+++   f++sk + e+  ++lkd+l++q    +q++ ++  + le+  +
  MMETSP1325-20131115|8966_1 22 LKVLEEELHKldnFKESKDKMEEeIQALKDELKAQedahMQALTTSERKFLEEKAK 77
                9*********7776665555555589999***999999999999888888877654 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.5   0.00026      0.16      35      74 ..      20      59 ..      16      66 .. 0.90
   2 ?    3.2   0.2      0.11        66       6      35 ..      62      91 ..      57     102 .. 0.73

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00026
   PF07544.8 35 hrlqkaraaveelpdisrsveeqeaeIeeleeqiarkrev 74
                 rl+ + + +++l++  +s++ +e+eI+ l+++++++++ 
  MMETSP1325-20131115|8966_1 20 ARLKVLEEELHKLDNFKESKDKMEEEIQALKDELKAQEDA 59
                689999999**************************99876 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.11
   PF07544.8  6 Plifdllkeiekdpnldskdletatsslkh 35
                ++++++ ++   ++ +  kd+++ +++l++
  MMETSP1325-20131115|8966_1 62 QALTTSERKFLEEKAKMQKDMDKRADELRK 91
                556666666666688889999999999994 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   5.3   0.00031      0.19     330     417 ..      16      98 ..       7     105 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00031
   PF03961.8 330 pelkeklkeleeeleel...eeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeeleskkkeakikvn 417
                 ++l ++lk leeel++l   +e+ +k +++++ l++     +l++++ + ++ l+++  k+ ee +++++++++  +el++    aki+v+
  MMETSP1325-20131115|8966_1  16 LALTARLKVLEEELHKLdnfKESKDKMEEEIQALKD-----ELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRKE---AKIQVQ 98 
                 677888899999999998888888888888888888.....56677788888899999999999999999999999998887...566665 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   6.9   0.00043      0.26      81     159 ..      20      96 ..       2     104 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00043
   PF04156.9  81 eelsesesqlsele...eeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkee 159
                 ++l+ +e++l +l+   e  +++ee++++l++el+++e++  +++   +s+++ le+ ++  k++ k+  elr   +++k +
  MMETSP1325-20131115|8966_1  20 ARLKVLEEELHKLDnfkESKDKMEEEIQALKDELKAQEDAHMQAL--TTSERKFLEEKAKMQKDMDKRADELR---KEAKIQ 96 
                 344444444444444446666677777777777777777776666..66666666666666666666666666...333333 PP

>> PF07798.6  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   6.6     0.001      0.61      33     110 ..      19      96 ..      13     102 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.001
   PF07798.6  33 ndslevvakdlvtkeeqekseyqqksdlaklkselvsleksefsnlqaeneklksdleklknkLrdeinkvraevrLD 110
                 ++ l+v++++l +  + + s+ +++ ++++lk+el   e+ ++++l ++  k  ++  k+++++ +  +++r e++++
  MMETSP1325-20131115|8966_1  19 TARLKVLEEELHKLDNFKESKDKMEEEIQALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRKEAKIQ 96 
                 55666777777777777789999***********************99999999999999999999998888888765 PP

>> PF07218.6  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.1     0.001      0.61     202     273 ..      22      90 ..       5     105 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.001
   PF07218.6 202 ltpleelyetnvnlfalkysleklekeidilkneydkvkekeekeldeemkkikedkkkelekilkesdeek 273
                 l  lee      +l ++k s +k+e+ei+ lk+e +  ++   + l    +k  e+k k ++ + k +de +
  MMETSP1325-20131115|8966_1  22 LKVLEEE---LHKLDNFKESKDKMEEEIQALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELR 90 
                 3334332...236899*****************998888888888888888888888888888888888744 PP

>> PF03255.9  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.4    0.0011      0.64       7      60 ..      20      72 ..      14      84 .. 0.85
   2 ?   -0.4   0.1       1.1   6.5e+02      25      40 ..      77      92 ..      69     102 .. 0.44

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0011
   PF03255.9  7 kplaelekkieelkklaekkdvdvseeiekLekkleklkkeiysnLtplqrvql 60
                 +l+ le+++++l +++e+kd+ ++eei++L++ l+ +++ +++ Lt+ +r  l
  MMETSP1325-20131115|8966_1 20 ARLKVLEEELHKLDNFKESKDK-MEEEIQALKDELKAQEDAHMQALTTSERKFL 72
                6678899999***999997766.999*********************9998765 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 1.1
   PF03255.9 25 kkdvdvseeiekLekk 40
                k ++d+++  ++L+k 
  MMETSP1325-20131115|8966_1 77 KMQKDMDKRADELRKE 92
                2233333333333332 PP

>> PF02841.9  Guanylate-binding protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   8.9    0.0018       1.1     197     282 ..      16     101 ..       6     106 .] 0.75

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0018
   PF02841.9 197 kaltakekeieaeqakaeaaeaekelleekqkeeeqrmeakeksleehvkqLkekleeereklleeqerllekklkeqeellkegf 282
                  alta+ k  e+e  k +  ++ k+ +ee+ +  + +++a+e  + + ++  ++k+ ee++k++++ ++ +++ +ke +  +++g+
  MMETSP1325-20131115|8966_1  16 LALTARLKVLEEELHKLDNFKESKDKMEEEIQALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRKEAKIQVQNGL 101
                 46777777788888888888888888888888888888888888887777778888888888888888888887777777776665 PP

>> PF13010.1  Primase helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.2    0.0029       1.7       8      77 ..      17      84 ..      10     102 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0029
                -------HHHHHHHHH--..---HHHHHHHHHTS---HH.............HHHHHTS---TTTTT--S CS
   PF13010.1  8 etekeleklkeelakydkfkGktveaireevCkkikkkleekskkakailntakkvvCegktyadvgidr 77
                  +  l+ l+eel+k d+fk  + +++ ee+ +++k++l+++++   + l+t ++   e+k   + ++d+
  MMETSP1325-20131115|8966_1 17 ALTARLKVLEEELHKLDNFK-ESKDKMEEEI-QALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDK 84
                45678999***********7.5679998888.899999*9999999999**9999999999998888886 PP

>> PF06667.7  Phage shock protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   1.5    0.0033         2      36      69 ..      24      57 ..      17      60 .. 0.86
   2 ?    5.3   1.2     0.029        17      31      61 ..      59      89 ..      55      99 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0033
   PF06667.7 36 lseedekeLeeLlekaekleeRietlErildaes 69
                + ee+ ++L++  e+ +k+ee i++l + l a++
  MMETSP1325-20131115|8966_1 24 VLEEELHKLDNFKESKDKMEEEIQALKDELKAQE 57
                568999********************98887765 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.029
   PF06667.7 31 kksqglseedekeLeeLlekaekleeRietl 61
                 ++q l+++++k Lee ++  + +++R + l
  MMETSP1325-20131115|8966_1 59 AHMQALTTSERKFLEEKAKMQKDMDKRADEL 89
                56899**********************8876 PP

>> PF14412.1  A nuclease family of the HNH/ENDO VII superfamily with conserved AHH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.8   0.00054      0.32      77     108 ..      25      55 ..      17      57 .. 0.86
   2 ?    0.7   0.2      0.77   4.6e+02      88     107 ..      71      90 ..      58     100 .. 0.54

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00054
   PF14412.1  77 vydrlkkaekskeegkealleelaklknelrk 108
                 + ++l k+++ ++e k+++ ee++ lk+el+ 
  MMETSP1325-20131115|8966_1  25 LEEELHKLDN-FKESKDKMEEEIQALKDELKA 55 
                 5678888999.******************986 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.77
   PF14412.1  88 keegkealleelaklknelr 107
                 + e+k +++++  k ++elr
  MMETSP1325-20131115|8966_1  71 FLEEKAKMQKDMDKRADELR 90 
                 33334444444444444444 PP

>> PF10168.4  Nuclear pore component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   5.0    0.0036       2.1     589     657 ..      23      91 ..      12     103 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0036
   PF10168.4 589 kslseaaekLaekfeeikerqellvrrlkkllqs.lnsqLPvlseserdlkkelqrinkqlrslaaaleq 657
                 k+l e+ +kL + f e k++ e+ ++ lk  l+   ++ +  l++ser + +e  +++k + + a +l +
  MMETSP1325-20131115|8966_1  23 KVLEEELHKL-DNFKESKDKMEEEIQALKDELKAqEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRK 91 
                 5666777776.56777777777777777665554144566777777777777776666666655555544 PP

>> PF10079.4  Uncharacterized protein conserved in bacteria (DUF2317)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   6.5    0.0044       2.6     424     486 ..      31      93 ..      13     102 .. 0.81

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0044
   PF10079.4 424 ieeafeeakeeleaelkelkeeaakldpslegaleanekkilkqlerLekkllkaerrkheel 486
                   ++f+e k+++e+e+++lk+e+++ ++   +al ++e+k l++  +++k + k+  +  +e+
  MMETSP1325-20131115|8966_1  31 KLDNFKESKDKMEEEIQALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRKEA 93 
                 446899******************99999999********99999999999988876655554 PP

>> PF11802.3  Centromere-associated protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   6.9      0.02        12     111     171 ..      21      76 ..      13      89 .. 0.71
   2 ?    3.1   0.8     0.072        43     121     148 ..      67      94 ..      57     101 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.02
   PF11802.3 111 knekLkedLereqkfldeqqqildslkelqkelknkvrtlsesrifselkqkleklkeeke 171
                 + ++L e+L++  +f++ + ++ + ++ l++elk++  ++ +           +k+ eek 
  MMETSP1325-20131115|8966_1  21 RLKVLEEELHKLDNFKESKDKMEEEIQALKDELKAQEDAHMQALTT-----SERKFLEEKA 76 
                 55899****************************9987766544333.....3333333333 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.072
   PF11802.3 121 reqkfldeqqqildslkelqkelknkvr 148
                  e+kfl+e+ ++ + ++++ +el+++ +
  MMETSP1325-20131115|8966_1  67 SERKFLEEKAKMQKDMDKRADELRKEAK 94 
                 5788999999999999998888887765 PP

>> PF10107.4  Endonuclease related to archaeal Holliday junction resolvase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   5.0     0.014       8.6      12      64 ..      45      97 ..      38     100 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.014
   PF10107.4 12 kivklqekvekrarelfeqlkkaereeleaqveeeaeakleewkkkeekeirk 64
                +i+ l+ ++++++ + ++ l+++er+ le+++++++++  + ++ ++e +i+ 
  MMETSP1325-20131115|8966_1 45 EIQALKDELKAQEDAHMQALTTSERKFLEEKAKMQKDMDKRADELRKEAKIQV 97
                68899999999999999999999999999999999999999999999999885 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  12.3     0.023        14      40      96 ..      34      93 ..      14     103 .. 0.56

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.023
   PF03938.9 40 klqeeakekqqelqakkkelqkeqknlqsera...qlsaeaekakeeelqakeqelqaya 96
                +++e ++++++e+qa k+el++++++  +      +   e+++++++++++++ el++ a
  MMETSP1325-20131115|8966_1 34 NFKESKDKMEEEIQALKDELKAQEDAHMQALTtseRKFLEEKAKMQKDMDKRADELRKEA 93
                334446688888888888888887777764211122222334445555555555555544 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   6.0     0.019        11      23      94 ..      17      85 ..      10      93 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.019
   PF14282.1 23 sLqkqiqsltkqlkelssdeeltaeekqkqqqliqqQIqalqaQiaqlqsq.qseeaqqsqessvedkssqtk 94
                +L+ +++ l+++l +l +     +e+k k++++iq+  ++l+aQ   + +   ++e++  +e++ ++k  +++
  MMETSP1325-20131115|8966_1 17 ALTARLKVLEEELHKLDN----FKESKDKMEEEIQALKDELKAQEDAHMQAlTTSERKFLEEKAKMQKDMDKR 85
                578889999999999998....457888888888888888888875554440444444334444434433333 PP

>> PF00631.17  GGL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       3.3     2e+03      13      26 ..      19      33 ..      14      39 .. 0.60
   2 ?    9.3   1.1    0.0015      0.86       6      25 ..      36      55 ..      31      69 .. 0.89
   3 ?    2.3   1.0      0.22   1.3e+02       8      26 ..      74      92 ..      67      99 .. 0.53

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 3.3
  PF00631.17 13 kreieqLkkeLer.e 26
                +  ++ L++eL++ +
  MMETSP1325-20131115|8966_1 19 TARLKVLEEELHKlD 33
                445566777777655 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0015
  PF00631.17  6 kqlklklkreieqLkkeLer 25
                k+ k+k+++ei+ Lk+eL+ 
  MMETSP1325-20131115|8966_1 36 KESKDKMEEEIQALKDELKA 55
                689***************96 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.22
  PF00631.17  8 lklklkreieqLkkeLere 26
                +k+k+++ +++  +eL +e
  MMETSP1325-20131115|8966_1 74 EKAKMQKDMDKRADELRKE 92
                4555555555544444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2141  (0.156597); expected 273.4 (0.02)
Passed bias filter:                      976  (0.0713868); expected 273.4 (0.02)
Passed Vit filter:                       172  (0.0125805); expected 13.7 (0.001)
Passed Fwd filter:                        32  (0.00234055); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.63u 0.39s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 498.07
//
Query:       MMETSP1325-20131115|8967_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.8   0.6      0.023   14.5   0.4    1.4  1  PF13516.1  Leucine Rich repeat
      0.041   13.7   0.0      0.048   13.5   0.0    1.2  1  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.4   3.4e-06     0.023       1      17 [.       5      22 ..       5      35 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.4e-06
   PF13516.1  1 lknLtsLdLsnNq.igde 17
                + nLt+++L +++ i+d+
  MMETSP1325-20131115|8967_1  5 CANLTTINLDYCDnITDD 22
                78**********77**98 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     7e-06     0.048       1      19 [.       7      31 ..       7      34 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 7e-06
                TESEEEETSS.BCBC.....HHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlts.....lppsl 19
                nL++++L+++ n+t+     l++s+
  MMETSP1325-20131115|8967_1  7 NLTTINLDYCdNITDdakrvLQNSI 31
                8*************75777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 169.15
//
Query:       MMETSP1325-20131115|8970_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.071   12.5   0.1      0.087   12.2   0.1    1.1  1  PF06552.7 Plant specific mitochondrial import receptor subunit TOM20


Domain annotation for each model (and alignments):
>> PF06552.7  Plant specific mitochondrial import receptor subunit TOM20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   6.3e-06     0.087     108     170 ..      66     128 ..      50     134 .] 0.78

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6.3e-06
                 HH-TT-HHHHHHHHHHHTHHHHH...HHHHH----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06552.7 108 dedPdndlyrkslelaakaPelh...telhkqgllsqllgaeasasvsaksvkkkksselkydvlg 170
                 +   ++++++  l++  ++ +lh   +el+ +  +  + +++ + +++ak  k++++++ k+ ++g
  MMETSP1325-20131115|8970_1  66 Q---EQEHMHEVLDMKLQIDDLHeheMELMARTHMADVATSVVNGKPTAKHPKERRATNRKFSMFG 128
                 4...45899**************555566666666777777788889999999********99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 729.80
//
Query:       MMETSP1325-20131115|8971_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.04   13.5   0.1      0.052   13.1   0.1    1.2  1  PF06653.6 Tight junction protein, Claudin-like


Domain annotation for each model (and alignments):
>> PF06653.6  Tight junction protein, Claudin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   3.8e-06     0.052      30      70 ..      73     115 ..      56     121 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.8e-06
   PF06653.6  30 ivdesgkkersiGivPfss..eeggwldaasilmyisfalflv 70 
                  v++ ++ ++ +G vP  s  + + wl +a++  ++s++++  
  MMETSP1325-20131115|8971_1  73 YVEDLTGCTDTVGTVPKLSfgQRACWLCLACWSTFTSLCCTTA 115
                 444555778999****999888888***************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 640.56
//
Query:       MMETSP1325-20131115|8972_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        45  (0.0032914); expected 273.4 (0.02)
Passed bias filter:                       41  (0.00299883); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.51
# Mc/sec: 150.36
//
Query:       MMETSP1325-20131115|8965_1  [L=491]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       671  (0.0490784); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.89u 0.38s 00:00:01.27 Elapsed: 00:00:00.57
# Mc/sec: 2028.64
//
Query:       MMETSP1325-20131115|8974_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 605.62
//
Query:       MMETSP1325-20131115|8976_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|8977_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        75  (0.00548566); expected 273.4 (0.02)
Passed bias filter:                       73  (0.00533938); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.55
# Mc/sec: 182.99
//
Query:       MMETSP1325-20131115|8978_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-38  129.5   1.3    9.2e-38  129.2   0.9    1.1  1  PF01529.15 DHHC palmitoyltransferase
  ------ inclusion threshold ------
      0.019   13.9   0.5      0.023   13.6   0.4    1.1  1  PF10326.4  Serpentine type 7TM GPCR chemoreceptor Str
      0.034   14.0   1.9      0.051   13.5   1.3    1.3  1  PF13160.1  Protein of unknown function (DUF3995)


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.2   0.9     2e-41   9.2e-38      48     172 ..       5     129 ..       3     131 .. 0.96

  Alignments for each domain:
  == domain 1    score: 129.2 bits;  conditional E-value: 2e-41
  PF01529.15  48 krfCkkCqtikpprshHCriCnkCvlkfDhHCpwvnncIGarNhkyFllfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllfllafhlylilrnmTtieele 172
                  r+C +C++ +pprs+HC+ C++Cv +fDhHCpwv+ncIG+rN++ F++fl+ ++ll + ++++ +  +v  ++  k  ++  + +   ++lvv+ +++l+ l++l  +h+ li+ n Tt+e+++
  MMETSP1325-20131115|8978_1   5 PRYCATCNLQRPPRSKHCSACDNCVDRFDHHCPWVGNCIGRRNYRTFVFFLVAVSLLDAALTAFAVLFLVGKAEPDKMIDFRNMIVVVALILVVYGTFMLISLGGLATYHANLIAINETTNEHVK 129
                 68********************************************************************9999999999988888888**********************************97 PP

>> PF10326.4  Serpentine type 7TM GPCR chemoreceptor Str
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.4     5e-06     0.023       8      74 ..      59     125 ..      52     150 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5e-06
   PF10326.4   8 gfflslllnliLiyLiltkskkklGsYkyLmiyfsifeiifsilevlvkpflhsynssfivfvdskk 74 
                 +++ + l+ + +++L+ +  + k+  +++++++++++ +++ ++ ++    l +y + +i + ++++
  MMETSP1325-20131115|8978_1  59 SLLDAALTAFAVLFLVGKAEPDKMIDFRNMIVVVALILVVYGTFMLISLGGLATYHANLIAINETTN 125
                 55557789999************************************99999999999999865554 PP

>> PF13160.1  Protein of unknown function (DUF3995)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.3   1.1e-05     0.051      37      89 ..      49     103 ..      43     124 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.1e-05
   PF13160.1  37 saaatllvaaalllaaalvllqagivgpvpspglv..rlglwvlaavlllRgvgd 89 
                 ++++ +lva+ ll aa+  ++   +vg + +++++  r +++v+a++l+++g+  
  MMETSP1325-20131115|8978_1  49 RTFVFFLVAVSLLDAALTAFAVLFLVGKAEPDKMIdfRNMIVVVALILVVYGTFM 103
                 578899*********999999997688888888887899*************544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       845  (0.0618051); expected 273.4 (0.02)
Passed bias filter:                      457  (0.033426); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 877.07
//
Query:       MMETSP1325-20131115|8979_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       449  (0.0328408); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.42s 00:00:00.95 Elapsed: 00:00:00.52
# Mc/sec: 1129.05
//
Query:       MMETSP1325-20131115|8980_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.38   10.0  10.7      0.046   13.0   1.9    2.1  2  PF10500.4 Nuclear RNA-splicing-associated protein
        3.4    6.8   7.1        1.5    7.9   2.9    1.8  2  PF07795.6 Protein of unknown function (DUF1635)


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.8     0.014        95       8      32 ..      12      34 ..       3      46 .. 0.50
   2 ?   13.0   1.9   6.8e-06     0.046      44      74 ..     109     139 ..      69     140 .] 0.53

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.014
   PF10500.4  8 rsrsrgkesekrrrssssssaksrs 32
                rs+s+ + ++  +r ++sss+++rs
  MMETSP1325-20131115|8980_1 12 RSKSP-QPNQYTKR-AASSSTSRRS 34
                34444.22233333.2233333333 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 6.8e-06
   PF10500.4  44 esrkkrekkkkkrrersssssssssssssss 74 
                 + + ++e+++ k     + sss+ssssssss
  MMETSP1325-20131115|8980_1 109 QQQLEEEQQEGKEGVNPAASSSASSSSSSSS 139
                 2233333333333323233333333332222 PP

>> PF07795.6  Protein of unknown function (DUF1635)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0     0.078   5.3e+02      76     102 ..       5      31 ..       2      75 .. 0.60
   2 ?    7.9   2.9   0.00023       1.5      52      97 ..      91     139 ..      69     140 .] 0.63

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.078
   PF07795.6  76 kpnssltesnsfsssdveesisssels 102
                 +pn+  ++s+s +  +  +   ss+ s
  MMETSP1325-20131115|8980_1   5 QPNQYTKRSKSPQPNQYTKRAASSSTS 31 
                 677766677776666555333333222 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00023
   PF07795.6  52 akeklqklllds.lllqqkk..edeqvkpnssltesnsfsssdveesis 97 
                 a++ ++ +ll++ ++l q++  e+eq++ ++ ++ + s s s + +s+s
  MMETSP1325-20131115|8980_1  91 ALQTVRDMLLKErHYLEQQQqlEEEQQEGKEGVNPAASSSASSSSSSSS 139
                 7778887777652677776655677777777666655555444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       816  (0.059684); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.42s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 670.98
//
Query:       MMETSP1325-20131115|8973_1  [L=818]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-22   77.4  14.0      0.011   15.5   0.0    9.3  9  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.012   15.2   0.0      0.092   12.3   0.0    2.4  3  PF08662.6  Eukaryotic translation initiation factor eIF2A
        0.2   11.2   1.2         42    3.8   0.0    3.6  4  PF07676.7  WD40-like Beta Propeller Repeat
        0.3   10.5   1.1         17    4.7   0.1    2.6  3  PF12657.2  Transcription factor IIIC subunit delta N-term


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.28   9.4e+02      16      29 ..       5      18 ..       5      18 .. 0.87
   2 !   15.5   0.0   3.1e-06     0.011       3      33 ..      39      69 ..      37      69 .. 0.89
   3 !   13.5   0.0   1.3e-05     0.044       7      35 ..     279     308 ..     274     311 .. 0.82
   4 !   14.2   0.1   7.6e-06     0.026       5      30 ..     394     419 ..     391     426 .. 0.84
   5 !   10.5   0.0   0.00012      0.41      10      32 ..     440     462 ..     432     470 .. 0.91
   6 ?    1.6   0.2     0.073   2.5e+02      11      38 ..     490     520 ..     482     521 .. 0.81
   7 !   10.0   0.0   0.00017      0.57      26      39 .]     595     608 ..     572     608 .. 0.76
   8 !    9.3   0.0   0.00028      0.96      25      39 .]     687     701 ..     665     701 .. 0.88
   9 ?    1.5   0.0     0.078   2.7e+02      12      29 ..     715     732 ..     706     736 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.28
                EEEEESSSTEEEEE CS
  PF00400.27 16 cvafspdgpllasg 29
                +va+sp+g+l+a +
  MMETSP1325-20131115|8973_1  5 AVAYSPNGHLVAVA 18
                599*******9975 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 3.1e-06
                EEEEEESSSSSEEEEEEESSSTEEEEEETTS CS
  PF00400.27  3 ckatlrgHtspVtcvafspdgpllasgSrDg 33
                ++++l+   +p+t+v+fspdg+lla +  Dg
  MMETSP1325-20131115|8973_1 39 VVKELQDTDAPITDVKFSPDGKLLAAATGDG 69
                6778888899*****************9997 PP

  == domain 3    score: 13.5 bits;  conditional E-value: 1.3e-05
                 EESSSSSEEEEEEESSSTEEEEEE.TTSEE CS
  PF00400.27   7 lrgHtspVtcvafspdgpllasgS.rDgti 35 
                 ++gH+++Vt vaf  + ++l+s + +D++i
  MMETSP1325-20131115|8973_1 279 YQGHSAGVTNVAFTVEDQVLVSTGaDDRCI 308
                 79**********************455555 PP

  == domain 4    score: 14.2 bits;  conditional E-value: 7.6e-06
                 EEEESSSSSEEEEEEESSSTEEEEEE CS
  PF00400.27   5 atlrgHtspVtcvafspdgpllasgS 30 
                 a ++gHt+++++ a sp+g ++a++ 
  MMETSP1325-20131115|8973_1 394 AFYKGHTGAIRAFAASPSGAFVATCD 419
                 5689**************99999985 PP

  == domain 5    score: 10.5 bits;  conditional E-value: 0.00012
                 SSSSEEEEEEESSSTEEEEEETT CS
  PF00400.27  10 HtspVtcvafspdgpllasgSrD 32 
                 H + + +vafspd++++++ ++D
  MMETSP1325-20131115|8973_1 440 HYADIVAVAFSPDSKRCITVGAD 462
                 888999***************99 PP

  == domain 6    score: 1.6 bits;  conditional E-value: 0.073
                 SSSEEEEEEESS....STEEEEEETTSEEEEE CS
  PF00400.27  11 tspVtcvafspd....gpllasgSrDgtirlW 38 
                 t+ V  +a++      g  +++g++ g i  W
  MMETSP1325-20131115|8973_1 490 TADVHFCAWAAAgsgaGYDFVTGGD-GHIQFW 520
                 6678888999999997777888888.***999 PP

  == domain 7    score: 10.0 bits;  conditional E-value: 0.00017
                 EEEEETTSEEEEEE CS
  PF00400.27  26 lasgSrDgtirlWd 39 
                  +sg+ Dg i++Wd
  MMETSP1325-20131115|8973_1 595 AVSGGNDGFIKVWD 608
                 59***********9 PP

  == domain 8    score: 9.3 bits;  conditional E-value: 0.00028
                 EEEEEETTSEEEEEE CS
  PF00400.27  25 llasgSrDgtirlWd 39 
                 l a+g++Dg ++lW+
  MMETSP1325-20131115|8973_1 687 LYATGGSDGVVKLWS 701
                 569***********7 PP

  == domain 9    score: 1.5 bits;  conditional E-value: 0.078
                 SSEEEEEEESSSTEEEEE CS
  PF00400.27  12 spVtcvafspdgpllasg 29 
                  pV ++++s dg+ ++ g
  MMETSP1325-20131115|8973_1 715 EPVKALSWSADGSSIVAG 732
                 689********9888766 PP

>> PF08662.6  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.7e-05     0.092     105     162 ..       5      66 ..       2      72 .. 0.90
   2 ?   -2.8   0.0       1.1   3.8e+03      56      87 ..     439     469 ..     415     478 .. 0.64
   3 ?   -1.6   0.0      0.48   1.6e+03      56      75 ..     711     730 ..     690     744 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.7e-05
   PF08662.6 105 tifwspqgrlvllaGfgnlaGeleiydvk..klkkiakaeasna..tlvewspdgryvlTat 162
                 ++ +sp+g+lv++a   +  G ++i+ +   +l+ +++ + ++a  t+v++spdg++++ at
  MMETSP1325-20131115|8973_1   5 AVAYSPNGHLVAVALGTEAPGVVSIVSTLkpELEVVKELQDTDApiTDVKFSPDGKLLAAAT 66 
                 689***********999999*****99887899999999998876699**********9998 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 1.1
   PF08662.6  56 lkkegpihdvaWspkskefaviyGkmpakisl 87 
                 l++  +i +va sp+sk+ + +  ++ ++i+l
  MMETSP1325-20131115|8973_1 439 LHY-ADIVAVAFSPDSKRCITVGADALHTIAL 469
                 333.3577777777777766555555555555 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.48
   PF08662.6  56 lkkegpihdvaWspkskefa 75 
                 l+   p+++++Ws +++ ++
  MMETSP1325-20131115|8973_1 711 LDVGEPVKALSWSADGSSIV 730
                 44445677777777766553 PP

>> PF07676.7  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       3.6   1.2e+04      15      20 ..       7      12 ..       6      12 .. 0.90
   2 ?    3.8   0.0     0.012        42      12      24 ..      51      63 ..      45      63 .. 0.74
   3 ?   -0.5   0.0      0.28   9.4e+02      15      22 ..     448     455 ..     441     455 .. 0.84
   4 ?    3.3   0.1     0.017        60      15      24 ..     721     730 ..     718     730 .. 0.89

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 3.6
                EE---- CS
   PF07676.7 15 awSPDG 20
                a+SP+G
  MMETSP1325-20131115|8973_1  7 AYSPNG 12
                79***9 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.012
                EEEEE-----EEE CS
   PF07676.7 12 gePawSPDGkkiv 24
                +   +SPDGk ++
  MMETSP1325-20131115|8973_1 51 TDVKFSPDGKLLA 63
                55569*****986 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.28
                 EE-----E CS
   PF07676.7  15 awSPDGkk 22 
                 a+SPD k+
  MMETSP1325-20131115|8973_1 448 AFSPDSKR 455
                 9****987 PP

  == domain 4    score: 3.3 bits;  conditional E-value: 0.017
                 EE-----EEE CS
   PF07676.7  15 awSPDGkkiv 24 
                 +wS DG++iv
  MMETSP1325-20131115|8973_1 721 SWSADGSSIV 730
                 8*******97 PP

>> PF12657.2  Transcription factor IIIC subunit delta N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.3     8e+03      12      23 ..      55      66 ..      53      86 .. 0.66
   2 ?    4.7   0.1    0.0051        17      82     143 ..     433     486 ..     420     499 .. 0.87
   3 ?    3.6   0.0     0.011        38       8      28 ..     718     738 ..     715     770 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 2.3
   PF12657.2 12 WSeDgqlavatg 23
                 S+Dg+l +a+ 
  MMETSP1325-20131115|8973_1 55 FSPDGKLLAAAT 66
                699999877764 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0051
   PF12657.2  82 vsvgeeissshvravaWSPsgLakngrClLavLttnlrlslyapvgneekgkWteiadvsel 143
                 +sv +e  ++ ++ava+SP      +rC+ +   + +++ l++ +    +g W+  a v+ +
  MMETSP1325-20131115|8973_1 433 ISVLPELHYADIVAVAFSP----DSKRCITVGADALHTIALWETP----RGTWVDGALVATA 486
                 57888999999********....888******************9....8999977666655 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.011
   PF12657.2   8 nalsWSeDgqlavatgetvhi 28 
                 +alsWS+Dg   va  +t  +
  MMETSP1325-20131115|8973_1 718 KALSWSADGSSIVAGLATTSV 738
                 79*******999987666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (818 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.14u 0.36s 00:00:01.50 Elapsed: 00:00:00.75
# Mc/sec: 2613.63
//
Query:       MMETSP1325-20131115|8984_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|8985_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 372.77
//
Query:       MMETSP1325-20131115|8983_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.44s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 806.47
//
Query:       MMETSP1325-20131115|8981_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.8    8.2   5.3       0.84    9.2   2.1    1.5  1  PF04050.9 Up-frameshift suppressor 2


Domain annotation for each model (and alignments):
>> PF04050.9  Up-frameshift suppressor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.1   6.2e-05      0.84       8      77 ..      93     159 ..      84     164 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 6.2e-05
   PF04050.9   8 ddgeedeelpeededdessdeeeeeeedeeedeeseseeeeievtrkeeevdpeeeaeFdrefeklmaEs 77 
                 +d++ed   +  + dd+  +ee+     +++de+ + e e+ e+ + + +vdp    e+ r  + l+aE+
  MMETSP1325-20131115|8981_1  93 EDDTED--ADIVEADDGTAEEERSLGAAGDHDEHRDAEHENLEIGH-HRHVDPLSLLELGRHVAGLVAED 159
                 334344..44555666666777777777777777777777777765.5689**99999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 922.85
//
Query:       MMETSP1325-20131115|8987_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 601.53
//
Query:       MMETSP1325-20131115|8982_1  [L=625]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-20   71.7   0.1    1.5e-10   40.2   0.1    3.8  3  PF00023.25 Ankyrin repeat
    9.4e-18   63.7   0.6    1.4e-10   40.9   0.1    3.9  5  PF13857.1  Ankyrin repeats (many copies)
    6.7e-17   61.4   0.2    2.6e-16   59.6   0.1    2.1  1  PF12796.2  Ankyrin repeats (3 copies)
    1.5e-15   55.5   0.1    9.4e-09   34.5   0.0    3.8  4  PF13606.1  Ankyrin repeat
    1.9e-11   44.0   0.1    4.1e-07   30.2   0.0    3.4  3  PF13637.1  Ankyrin repeats (many copies)
    9.1e-07   28.0   0.0    1.9e-06   27.0   0.0    1.5  1  PF02825.15 WWE domain
      5e-06   25.7   0.0    9.4e-06   24.8   0.0    1.4  1  PF00069.20 Protein kinase domain
     0.0055   15.6   0.1      0.012   14.5   0.0    1.5  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.017   14.7   0.1      0.044   13.4   0.1    1.6  1  PF01636.18 Phosphotransferase enzyme family
      0.039   12.9   0.0      0.069   12.1   0.0    1.4  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0      0.01        14       2      33 .]      25      60 ..      24      60 .. 0.92
   2 !   40.2   0.1   1.1e-13   1.5e-10       1      32 [.      61      92 ..      61      93 .. 0.96
   3 !   21.5   0.0   8.7e-08   0.00012       2      33 .]      95     127 ..      94     127 .. 0.97

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.01
                SCBHHHHHHHTT...HHHHHHHHHH.TTSSTTHBHT CS
  PF00023.25  2 GfTPLHlAalrg...nlevvklLls.qGAdlnaqdd 33
                G T L+ A+++    ++ ++  L+   GA++ aqd+
  MMETSP1325-20131115|8982_1 25 GTTRLMDASRKKgtlGTAMADELIFkFGANVGAQDK 60
                7788999999999999******************96 PP

  == domain 2    score: 40.2 bits;  conditional E-value: 1.1e-13
                TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                +G+TPLH A+++g+ +v++lL++ GAd+ a++
  MMETSP1325-20131115|8982_1 61 YGNTPLHHACENGHSDVASLLIEGGADVEAVN 92
                6****************************998 PP

  == domain 3    score: 21.5 bits;  conditional E-value: 8.7e-08
                 SCBHHHHHHHTTHHHHHHHHHH.TTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLls.qGAdlnaqdd 33 
                 G+TPL  A+l+ +++ ++ L++ +GA++ a+++
  MMETSP1325-20131115|8982_1  95 GYTPLLTAILKQQTKLARELIEdHGANVEARTK 127
                 9******************************96 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       5.9     8e+03      10      25 ..      19      34 ..      13      37 .. 0.76
   2 !   40.9   0.1     1e-13   1.4e-10       5      53 ..      52      99 ..      48      99 .. 0.96
   3 !   29.7   0.0   3.5e-10   4.8e-07       1      54 [.      81     135 ..      80     137 .. 0.93
   4 ?   -2.8   0.0       5.5   7.5e+03      31      54 ..     142     166 ..     139     167 .. 0.72
   5 ?   -2.3   0.0       4.1   5.6e+03       9      21 ..     452     464 ..     445     465 .. 0.66

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 5.9
   PF13857.1 10 natdeggntpLhlAak 25
                 +++++g+t L+ A +
  MMETSP1325-20131115|8982_1 19 KSRNTKGTTRLMDASR 34
                5678899999999987 PP

  == domain 2    score: 40.9 bits;  conditional E-value: 1e-13
   PF13857.1  5 gpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53
                g a+v a+d++gntpLh A+++g+++v+ lL++ gad  + ++ g t+l
  MMETSP1325-20131115|8982_1 52 G-ANVGAQDKYGNTPLHHACENGHSDVASLLIEGGADVEAVNETGYTPL 99
                4.8999******************************************8 PP

  == domain 3    score: 29.7 bits;  conditional E-value: 3.5e-10
   PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLl.apgadlnlrdsdg.ltald 54 
                 L+e g adv a +e+g+tpL +A+ ++++ ++r+L+ ++ga+  +r+++g +t l+
  MMETSP1325-20131115|8982_1  81 LIEGG-ADVEAVNETGYTPLLTAILKQQTKLARELIeDHGANVEARTKNGrNTTLH 135
                 67777.********************************************888775 PP

  == domain 4    score: -2.8 bits;  conditional E-value: 5.5
   PF13857.1  31 vvrlLl.apgadlnlrdsdgltald 54 
                 +++ Ll + +a  ++++ +g  +++
  MMETSP1325-20131115|8982_1 142 LAEVLLkRCPALEHMTNRNGKIPYE 166
                 6667776667888888888887776 PP

  == domain 5    score: -2.3 bits;  conditional E-value: 4.1
   PF13857.1   9 vnatdeggntpLh 21 
                 +  +++++n+ Lh
  MMETSP1325-20131115|8982_1 452 HANYRNSWNNGLH 464
                 4456778889998 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.1   1.9e-19   2.6e-16      15      88 ..      47     125 ..      29     126 .. 0.90

  Alignments for each domain:
  == domain 1    score: 59.6 bits;  conditional E-value: 1.9e-19
   PF12796.2  15 lLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLl.ekgadvnlr 88 
                 l+++ ga+v      g+tpLh+A+e+g+ ++++lL+e gadv+a ++ g+tpL  A+ +++++l++ L+ ++ga+v++r
  MMETSP1325-20131115|8982_1  47 LIFKFGANVGAqdkyGNTPLHHACENGHSDVASLLIEGGADVEAVNETGYTPLLTAILKQQTKLARELIeDHGANVEAR 125
                 445778888888888******************************************************778***9987 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.67   9.1e+02       2      28 ..      25      55 ..      24      57 .. 0.71
   2 !   34.5   0.0   6.9e-12   9.4e-09       1      29 [.      61      89 ..      61      90 .. 0.96
   3 !   15.4   0.0     1e-05     0.014       2      29 ..      95     123 ..      94     124 .. 0.92
   4 ?   -3.4   0.0        10   1.4e+04      16      26 ..     141     151 ..     136     154 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.67
   PF13606.1  2 GnTpLhlAasngr...ielveaLlen.gadi 28
                G T L+ A +++    ++++++L+++ ga++
  MMETSP1325-20131115|8982_1 25 GTTRLMDASRKKGtlgTAMADELIFKfGANV 55
                556677777765323479******9768987 PP

  == domain 2    score: 34.5 bits;  conditional E-value: 6.9e-12
   PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                +GnTpLh+A++ng+ +++++L+e gad+ 
  MMETSP1325-20131115|8982_1 61 YGNTPLHHACENGHSDVASLLIEGGADVE 89
                8**************************96 PP

  == domain 3    score: 15.4 bits;  conditional E-value: 1e-05
   PF13606.1   2 GnTpLhlAasngrielveaLle.ngadin 29 
                 G+TpL +A+ +++++l+++L+e +ga++ 
  MMETSP1325-20131115|8982_1  95 GYTPLLTAILKQQTKLARELIEdHGANVE 123
                 99*******************9679*986 PP

  == domain 4    score: -3.4 bits;  conditional E-value: 10
   PF13606.1  16 elveaLlenga 26 
                 el+e Ll++++
  MMETSP1325-20131115|8982_1 141 ELAEVLLKRCP 151
                 78999999875 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0     3e-10   4.1e-07      19      54 .]      47      82 ..      41      82 .. 0.93
   2 !   13.2   0.0   6.4e-05     0.088      15      53 ..      76     114 ..      75     115 .. 0.90
   3 !    9.2   0.0    0.0011       1.5       2      41 ..      96     137 ..      95     147 .. 0.85

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 3e-10
   PF13637.1 19 lLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                l++++g+++ ++d++Gnt+Lh A+++g+ +++ lL+
  MMETSP1325-20131115|8982_1 47 LIFKFGANVGAQDKYGNTPLHHACENGHSDVASLLI 82
                67799*****************************98 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 6.4e-05
   PF13637.1  15 elvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                 +++ lL+e g+d+ +++e G t+L  A+l+++ ++++ L
  MMETSP1325-20131115|8982_1  76 DVASLLIEGGADVEAVNETGYTPLLTAILKQQTKLAREL 114
                 5778999************************99988866 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.0011
   PF13637.1   2 ltaLhyaaisgrlelvklLl.ekgidinrtdesGn.taLhiA 41 
                 +t+L  a+ +  ++l++ L+ ++g+++ ++ ++G+ t Lh++
  MMETSP1325-20131115|8982_1  96 YTPLLTAILKQQTKLARELIeDHGANVEARTKNGRnTTLHKC 137
                 79999***************557*******777765788875 PP

>> PF02825.15  WWE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.4e-09   1.9e-06      10      71 ..     367     434 ..     362     435 .. 0.93

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 1.4e-09
  PF02825.15  10 Weye......dsngkWrpYspavsehIenayaakertlevdifgrpytidfksmtqlreetgttreVr 71 
                 We+       +   +W++Y++ v+ +I  a a++++ l  +i  ++y +d+ ++tq+++ tg tr+ r
  MMETSP1325-20131115|8982_1 367 WEWFdgpdgpNAPRQWTAYEDSVQDEIASASASGRTELTTSIGDAKYELDLLKLTQTNRTTGFTRKLR 434
                 888878877788899***********************************************999877 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   6.9e-09   9.4e-06      84     172 ..     491     585 ..     450     613 .. 0.79

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 6.9e-09
                 EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHH........T CS
  PF00069.20  84 dlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvll........k 172
                 +l+ +l  +++++  + ++i+  i ++l++lHs + +H D   + +    +g+ +i+D+ +a +   +  +++ l  +  + +PE           +
  MMETSP1325-20131115|8982_1 491 NLAVVLL-HERVDLSQSRSIFALIGKALSHLHSVQMVHGDFNLKEVVRMPDGKWRIIDLDFAST-IGEPVDAKMLSTSTAFSPPETTHldgnevmfR 585
                 4554444.89999*************************************************98.9999999999999******9965444444450 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   8.7e-06     0.012     108     168 ..     495     551 ..     487     561 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 8.7e-06
   PF06293.9 108 ilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldka 168
                 +l  ++ ++ + +r ++  +G++ + +h++++ H+d+n + ++   ++   k  +iDld a
  MMETSP1325-20131115|8982_1 495 VLL-HERVDLSQSRSIFALIGKALSHLHSVQMVHGDFNLKEVVRMPDG---KWRIIDLDFA 551
                 555.34577778899999************************999998...9999999865 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   3.2e-05     0.044     151     197 ..     506     553 ..     459     557 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.2e-05
                 H.....HHHHHHHHHHCSS--EEB-SS-SGGGEEEE.TTTTEEEE---TT-BB CS
  PF01636.18 151 r.....vlaalaallpgaeppvllHgDlhpgNllvd.pddgrvgviDfedagl 197
                       ++ + +++l+   + + +HgD+++  ++   ++++r  +iD+++a++
  MMETSP1325-20131115|8982_1 506 SrsifaLIGKALSHLH---SVQMVHGDFNLKEVVRMpDGKWR--IIDLDFAST 553
                 2444448999999***...7**************99888888..9*****986 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     5e-05     0.069      97     175 ..     498     573 ..     457     611 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5e-05
                 TTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HH CS
  PF07714.12  97 kekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapE 175
                 +e+++l++  ++ + i k++++L+s ++vH d   + v    + + +i D   a++i    + ++ +   ++  + +pE
  MMETSP1325-20131115|8982_1 498 HERVDLSQSRSIFALIGKALSHLHSVQMVHGDFNLKEVVRMPDGKWRIIDLDFASTI---GEPVDAKMLSTSTAFSPPE 573
                 35789999999****************************999999999999999999...3344444455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.97u 0.35s 00:00:01.31 Elapsed: 00:00:00.71
# Mc/sec: 2109.47
//
Query:       MMETSP1325-20131115|8989_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 347.23
//
Query:       MMETSP1325-20131115|8986_1  [L=929]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-12   46.0   0.0      8e-12   45.0   0.0    1.5  1  PF00651.26 BTB/POZ domain
  ------ inclusion threshold ------
       0.18   11.9   0.0       0.39   10.8   0.0    1.5  1  PF10193.4  Telomere length regulation protein


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   1.2e-15     8e-12       5     107 ..     723     840 ..     719     843 .. 0.86

  Alignments for each domain:
  == domain 1    score: 45.0 bits;  conditional E-value: 1.2e-15
                 HHTT-S--EEEEETTTEEEEE-HHHHHHH-HHHHHHTTTT.....TTTT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC...........ECCHHHHHHHHHHHHT-HHHHCHHHHHH CS
  PF00651.26   5 reqgelcDvtlvvgdgkefkahkavLaarSpyFkalftgg.....eieestvseieledvepevfealLefiYtgeleit..........seenveelLaaadllqiprlkdaceefl 107
                 +++ +++Dv+++++dg+e++ahk++L  +Sp+F +lf+g      + +   +++ + +  ++e++  +L+++Y+g  e            s   ++elL++ d++++++ k+ +e+ +
  MMETSP1325-20131115|8986_1 723 FDRPAFSDVVFEFDDGREIHAHKLILGLSSPVFATLFSGWaaeavGTSTGRTCIPPTPGQSYEAMLHILKYVYRGLHEDLidimafpsdhSIGLAMELLSLTDYYKMDHFKEWLEQQI 840
                 56779***********************************87777444555568999*****************9665558888999988888899*************999887765 PP

>> PF10193.4  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   5.8e-05      0.39      45      94 ..     811     860 ..     800     869 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 5.8e-05
                 ------HHHHHH---TT--TTTTHHHHHHHHHHHHHSGGGG--.-HHHHT CS
   PF10193.4  45 elaeeLlkvLlhlenkfdledFeelrlqalvavlvtdpkqvtqylteeff 94 
                 +++  L+  Ll+l++ +++++F+e+  q +va  +++ ++v +  t+ f 
  MMETSP1325-20131115|8986_1 811 DHSIGLAMELLSLTDYYKMDHFKEWLEQQIVAWEIITISNVCDLSTHAFA 860
                 78999***************************999999999886666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (929 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.30u 0.36s 00:00:01.66 Elapsed: 00:00:00.64
# Mc/sec: 3478.46
//
Query:       MMETSP1325-20131115|8990_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 446.38
//
Query:       MMETSP1325-20131115|8988_1  [L=406]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-09   37.6   0.1    3.5e-09   36.6   0.1    1.5  1  PF12931.2 Sec23-binding domain of Sec16
  ------ inclusion threshold ------
       0.03   13.5   2.5       0.55    9.4   0.3    2.3  2  PF05308.6 Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF12931.2  Sec23-binding domain of Sec16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.1   5.2e-13   3.5e-09       2     222 ..      89     292 ..      88     301 .. 0.71

  Alignments for each domain:
  == domain 1    score: 36.6 bits;  conditional E-value: 5.2e-13
   PF12931.2   2 ilklLltGerekAvelavdqrlWahAllisstlgkekwkqVvqefireevkvgknskkltelLavlyevfagnveesidelvpksavsnleeesaaknWretvalilsNrssddsqalla.lGklLlsy.grveaahicflla.rvplspkpvlddseakfellgl....tslndlesilltEvYEfalsllkaspkfgiphLlayKlvhAavLaeyGlkseaqkYcd 222
                 +++ L++G+   Ave + ++++ a All++s+ g e w+q+ +++ ++e  ++k      e+L+++  +++      +++lv++s            +Wret+a++    +s++   l+  lG  L  + +  + a +c++ a +vp + k ++++ +++ +        + + ++ si+ +E     +s l+++p++ +++  a+   + a+La++G +++a kY+ 
  MMETSP1325-20131115|8988_1  89 VKRALVVGNFPAAVEGCFQRGQLADALLLASCGGAELWEQTRDRYFKRE--AAKR----PEFLNIVTAIITS----KLSDLVSSS---------HLADWRETLAILSTYGKSEEFPVLCEqLGARLEAEaDDKASAALCYMCAvNVPKTVKFWIEELNKSRSDSANpmalHAFIEKVSIFTQED----QSSLTEEPET-AAAVGALFTEYGAMLANQGAMETALKYIS 292
                 7899*********************************************..3333....4678888877776....678999983.........4568*****865555444444333335**99976516778899******66666677777665554333331222233344444444442....2222444554.77778888888889999999999999985 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.3   8.1e-05      0.55     180     211 ..      49      80 ..       5      94 .. 0.64
   2 ?    4.0   0.1    0.0037        25     186     233 ..     311     361 ..     271     370 .. 0.62

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 8.1e-05
   PF05308.6 180 pteepelevppppppPpPlpavslqqsasaie 211
                  te  +l+ ++ pppPpP+p++   + ++a+ 
  MMETSP1325-20131115|8988_1  49 ATESLKLDDDNTPPPPPPPPSAGGAAATTAVA 80 
                 33444444556677777777766665555554 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0037
   PF05308.6 186 levppppppPpPlpavslqqsasai.....elikerkekksaeektlvssksk 233
                 +e++  p pP P    ++   +s+       l++++++++++e+ + +   ++
  MMETSP1325-20131115|8988_1 311 MEQTGAPHPPLPFEQQKMVG-VSPNfgkvfTLQQQQQQQQEQEQAAAAAA-AQ 361
                 45566788888888766653.33333555555555555444444443333.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1804  (0.131949); expected 273.4 (0.02)
Passed bias filter:                      742  (0.0542715); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.99u 0.38s 00:00:01.37 Elapsed: 00:00:00.56
# Mc/sec: 1706.88
//
Query:       MMETSP1325-20131115|8991_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-15   54.6   1.2      1e-14   54.5   0.8    1.0  1  PF02466.14 Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> PF02466.14  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.8   7.3e-19     1e-14      62     113 ..       1      52 []       1      52 [] 0.98

  Alignments for each domain:
  == domain 1    score: 54.5 bits;  conditional E-value: 7.3e-19
  PF02466.14  62 avvgaiYsgiecaleglrgkndllnsvaAGaltGavlarrggpqaaavgaag 113
                 av+ +++sg ec++e+ rgk+d +n v++G+++Ga++++++gp  +++g+ag
  MMETSP1325-20131115|8991_1   1 AVLSGVFSGSECVIEKWRGKHDVMNQVLSGCFAGAAISAKSGPLMMCGGCAG 52 
                 7899**********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|8992_1  [L=458]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-39  133.8   0.2      7e-39  133.0   0.1    1.4  1  PF00009.22 Elongation factor Tu GTP binding domain
    6.5e-39  131.7   0.4    1.4e-38  130.7   0.3    1.6  1  PF09173.6  Initiation factor eIF2 gamma, C terminal
    1.6e-13   50.4   1.1    2.4e-12   46.6   0.3    2.6  2  PF03144.20 Elongation factor Tu domain 2
      0.003   17.4   0.0     0.0068   16.2   0.0    1.7  1  PF01926.18 50S ribosome-binding GTPase
  ------ inclusion threshold ------
       0.09   12.4   0.2       0.34   10.5   0.1    1.9  2  PF00350.18 Dynamin family


Domain annotation for each model (and alignments):
>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.0   0.1   2.6e-42     7e-39       2     187 ..      33     232 ..      32     233 .. 0.91

  Alignments for each domain:
  == domain 1    score: 133.0 bits;  conditional E-value: 2.6e-42
                 GEEEEEEEESTT---HHHHHHHHHHCCCCEHHHHHHHC-..HHHCCHHHH---BBSSEEEEEE.............................T..ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.S-HHHHHHHHHHHHTT--.EEEEEE-TTST.CHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHHHHHHHHHHSC CS
  PF00009.22   2 kirnigiighvDhGKtTltdallykagaiskrgeeaegerlldklkeerergiTiksaaisle.............................k.etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqTeevlrlakklgvk.iivviNKiDrv.eaeleeiveelkekllekylekgeeevpvvpgSalkgegidaLleaivellp 187
                  ++nig+ighv hGK+T+++a+  ++               + ++k+e er+iTik+++++++                             k  + +r+++++D+PGH+  ++++++g++v+D+a+l+v+ +e  ++pqT e+l +++ +++  ii+++NK+D+v ++++  ++e+++ k++  ++ ++   +p++p+Sa+ +++id ++e+i +++p
  MMETSP1325-20131115|8992_1  33 ATINIGTIGHVAHGKSTVVKAISGVQ---------------TVRFKNELERNITIKLGYANAKiyrcenpaegpgnyrsfgsskadnfqmdgKtWQLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETcPQPQTSEHLAAVEIMRLGnIIILQNKVDLVkQDQALAQHEQIR-KFVAGTVADS---APIIPISAVLKYNIDVVVEYICHHVP 232
                 679********************666...............899*************************************99998887655258899************************************99*****************99***********5455555555555.9999998775...7**********************998 PP

>> PF09173.6  Initiation factor eIF2 gamma, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.7   0.3   5.1e-42   1.4e-38       1      88 []     356     447 ..     356     447 .. 0.99

  Alignments for each domain:
  == domain 1    score: 130.7 bits;  conditional E-value: 5.1e-42
                 EEEEEEE----SBE----S.....-EB-----TT---EEE----EE---EEEE-SSEEEEEEEEEEE-SSSS--EEEEE----EEE-----E CS
   PF09173.6   1 yteleieykllerlvgvke....keakveklkkkEvlmlnvgsattggvvtavkkdevkveLkkPvcaekgekvaisrrvekrWrLigwGti 88 
                 +te+ei+++ll+rl+gvk+    k+akv+kl k+Evlm+n+gs+ tgg+v+avk d +k++L++Pvc+++gek+a+srrv+k+WrLigwG+i
  MMETSP1325-20131115|8992_1 356 FTEVEISFYLLRRLLGVKTqegsKQAKVQKLAKQEVLMVNIGSTATGGKVVAVKSDLAKIQLTQPVCTQEGEKIALSRRVDKHWRLIGWGQI 447
                 789***************************************************************************************98 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.3   8.8e-16   2.4e-12       1      73 [.     264     346 ..     264     347 .. 0.93
   2 ?    1.5   0.0      0.11   2.9e+02      11      25 ..     445     457 ..     444     458 .] 0.89

  Alignments for each domain:
  == domain 1    score: 46.6 bits;  conditional E-value: 8.8e-16
                 EEEEEEEEEE--EETTEEEEEET.TTCTEEE........EEEEEEEEEETTCEESEEECEE--EEEESSSGGGG..GTT---EE CS
  PF03144.20   1 GtvatgrvysGtlkkGdtvrilg.ndtskke........ivtrvrsletfngdldeavaganaGvivaikgled..aiikGdtl 73 
                 G va+g++ +G+l+ Gd++++++ +  +k++        i++r+ sl+++++dl+ av+g  +Gv ++i+++ +  +  +G++l
  MMETSP1325-20131115|8992_1 264 GGVAGGSILQGVLRLGDEIEVRPgLV-EKDNdgkvkcqpIYSRINSLYAEHNDLKYAVPGGLIGVGTKIDPTLTraDRLVGQVL 346
                 89*********************875.455589**************************************9999988999998 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.11
                 --EETTEEEEEETTT CS
  PF03144.20  11 GtlkkGdtvrilgnd 25 
                 G++++G +v+i  n+
  MMETSP1325-20131115|8992_1 445 GQIRRGTKVEI--NE 457
                 99*********..75 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   2.5e-06    0.0068       2      91 ..      37     155 ..      36     204 .. 0.60

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 2.5e-06
                 EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE.................................ETTE.....EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTS..HH CS
  PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev.................................kkek.....iilvDtPGiiegasedkeiegikkylekveradvlllvvdasa..vl 91 
                 ++ +G+   GKSt+++a++g + ++ ++      +i+ +++                                 +  +     + +vD+PG        + i+ ++ +l  +  +d++ll+v  ++  ++
  MMETSP1325-20131115|8992_1  37 IGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYAnakiyrcenpaegpgnyrsfgsskadnfqmdgkT--WqlqrhVSFVDCPGH-------D-IL-MATMLNGAAVMDAALLLVAGNEtcPQ 155
                 7889***************85444444444444444333322333444444455555555566665555655431..24455557******2.......3.43.34467777777777777775554522 PP

>> PF00350.18  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00013      0.34       1      23 [.      37      59 ..      37     105 .. 0.81
   2 ?   -1.6   0.0      0.66   1.8e+03     100     112 ..     115     127 ..     109     132 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00013
                EEEE--TT---HHHHHHH----- CS
  PF00350.18  1 iavvGsqSaGKSSllnaLlgedi 23
                i  +G++ +GKS++++a+ g + 
  MMETSP1325-20131115|8992_1 37 IGTIGHVAHGKSTVVKAISGVQT 59
                5679****************984 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.66
                 S-SEEEEE----- CS
  PF00350.18 100 vkgltlvDtPGld 112
                 + ++++vD PG d
  MMETSP1325-20131115|8992_1 115 QRHVSFVDCPGHD 127
                 67899******75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.38s 00:00:01.16 Elapsed: 00:00:00.57
# Mc/sec: 1892.30
//
Query:       MMETSP1325-20131115|8996_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-07   31.0   4.6     0.0029   17.3   1.2    2.8  2  PF01556.13 DnaJ C terminal domain
  ------ inclusion threshold ------
      0.067   12.6   0.0        2.9    7.3   0.0    2.2  2  PF04246.7  Positive regulator of sigma(E), RseC/MucC


Domain annotation for each model (and alignments):
>> PF01556.13  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   6.6e-06     0.045      16      45 ..      35      64 ..      23      66 .. 0.91
   2 !   17.3   1.2   4.3e-07    0.0029      16      63 ..     102     148 ..      89     151 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.6e-06
  PF01556.13 16 Ggtvevptldgrkikvkippgtkpgeklri 45
                G  ++v+ ++g+++++++ppgt pg kl +
  MMETSP1325-20131115|8996_1 35 GSVLQVTAPNGQPMNITVPPGTTPGSKLEV 64
                56689*********************9976 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 4.3e-07
  PF01556.13  16 GgtvevptldgrkikvkippgtkpgeklrikgkGmpkkknsnerGdLi 63 
                 G+ ++v+ ++g++i+v++ppg+ pg+++ ++  G+    ++ ++G  +
  MMETSP1325-20131115|8996_1 102 GTVLQVQGPNGQTISVTVPPGVGPGQVMHVQPGGLGAVTGG-GQGGRY 148
                 7889**************************99999444444.666555 PP

>> PF04246.7  Positive regulator of sigma(E), RseC/MucC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0   0.00042       2.9      26      71 ..      30      75 ..      28      81 .. 0.92
   2 ?    3.0   0.0    0.0088        60      26      60 ..      97     131 ..      94     134 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00042
   PF04246.7 26 ggCgtgllakassekklevevenelglkvGdeVevglpesallkaa 71
                +gCg g++ + + ++ + +++    g ++G + ev+lpe a   aa
  MMETSP1325-20131115|8996_1 30 AGCGPGSVLQVTAPNGQPMNITVPPGTTPGSKLEVQLPETAPAPAA 75
                69*************************************9987776 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.0088
   PF04246.7  26 ggCgtgllakassekklevevenelglkvGdeVev 60 
                 +gCg g++ + ++++ ++++v    g+ +G+   v
  MMETSP1325-20131115|8996_1  97 QGCGPGTVLQVQGPNGQTISVTVPPGVGPGQVMHV 131
                 69****************************97665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 1134.28
//
Query:       MMETSP1325-20131115|8994_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-33  116.9   0.5    1.2e-33  116.7   0.3    1.0  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
      0.021   13.2   0.4      0.028   12.8   0.2    1.1  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.7   0.3   1.8e-37   1.2e-33      99     218 ..      10     130 ..       3     132 .. 0.92

  Alignments for each domain:
  == domain 1    score: 116.7 bits;  conditional E-value: 1.8e-37
                 S--CCCC--C.CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCT.TC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
  PF00112.18  99 kCkkkkkkekevakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygven.gkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                 +C + k+ e + + i+g++ ++  +e+alk+a a+   vsv idas+++fqlY+sGvy    csst+l+h+v++vGy++   g +yWiv+NSWg +wG++GYi++ar+ +n+cgi+++a +
  MMETSP1325-20131115|8994_1  10 NCCEAKSGEGVSTGITGHTAIPTGDEDALKEASATLTVVSVGIDASAMSFQLYNSGVYAPAGCSSTNLDHGVAVVGYNSMTpGGDYWIVRNSWGVTWGQRGYIYMARNDDNKCGIATDAAT 130
                 45555555566899****************************************************************98889*********************************99875 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   4.1e-06     0.028     358     399 ..      76     116 ..      71     120 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.1e-06
  PF03051.10 358 lmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfvmsd 399
                  ++H + ++g +   +     w v nsWG   G++Gy  m+ 
  MMETSP1325-20131115|8994_1  76 NLDHGVAVVGYNS-MTPGGDYWIVRNSWGVTWGQRGYIYMAR 116
                 6789999999988.6666678****************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 708.26
//
Query:       MMETSP1325-20131115|8998_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-05   23.0   0.0    7.9e-05   22.6   0.0    1.2  1  PF13499.1  EF-hand domain pair
    0.00054   19.5   0.0      0.051   13.3   0.0    2.3  2  PF13405.1  EF-hand domain
     0.0034   17.7   0.0     0.0039   17.5   0.0    1.0  1  PF11116.3  Protein of unknown function (DUF2624)
  ------ inclusion threshold ------
      0.013   14.6   0.0        0.3   10.3   0.0    2.1  2  PF00036.27 EF hand
       0.02   14.3   0.0      0.023   14.1   0.0    1.3  1  PF13833.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   2.9e-08   7.9e-05      13      65 ..      10      58 ..       8      64 .. 0.91

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 2.9e-08
   PF13499.1 13 gdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65
                gd +l+ eeL  ++k+ g e + +evr+v    +++lD ng+  l+ +E+ +a
  MMETSP1325-20131115|8998_1 10 GDSTLSAEELYVITKKCGMEVTAKEVRRV----VNYLDGNGNAELDHNELNEA 58
                799***************88888888888....****************9886 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0      0.02        54      13      25 ..      10      22 ..       8      28 .. 0.82
   2 !   13.3   0.0   1.9e-05     0.051       1      28 [.      34      61 ..      34      65 .. 0.92

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.02
                ----B---HHHHH CS
   PF13405.1 13 gdGkidaeELrda 25
                gd +++aeEL  +
  MMETSP1325-20131115|8998_1 10 GDSTLSAEELYVI 22
                899*******876 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 1.9e-05
                HHH---GCC-------B---HHHHHHH. CS
   PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrk 28
                e+r++ + +D +g+ ++d +EL  aLr+
  MMETSP1325-20131115|8998_1 34 EVRRVVNYLDGNGNAELDHNELNEALRR 61
                679999********************95 PP

>> PF11116.3  Protein of unknown function (DUF2624)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.4e-06    0.0039      14      64 ..      13      63 ..      12      66 .] 0.91

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 1.4e-06
   PF11116.3 14 sitaeeLlkyakqygikiteeqakqiakllrgknidifneserkkllkela 64
                +++aeeL   +k+ g+++t ++ + ++++l g+     +++e +++l++ +
  MMETSP1325-20131115|8998_1 13 TLSAEELYVITKKCGMEVTAKEVRRVVNYLDGNGNAELDHNELNEALRRAR 63
                6899*****************************999999999999998866 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.036        97      13      27 ..      10      24 ..       9      26 .. 0.82
   2 ?   10.3   0.0   0.00011       0.3       1      28 [.      34      61 ..      34      62 .. 0.92

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.036
                TSSEBEHHHHHHHHH CS
  PF00036.27 13 gdGkIsfeEfkealk 27
                gd ++s eE+  + k
  MMETSP1325-20131115|8998_1 10 GDSTLSAEELYVITK 24
                8999*****987766 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00011
                HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkk 28
                e++++ + +D +g+  ++ +E+ eal++
  MMETSP1325-20131115|8998_1 34 EVRRVVNYLDGNGNAELDHNELNEALRR 61
                78999999*****************986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   8.6e-06     0.023       5      39 ..      14      47 ..      10      62 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 8.6e-06
   PF13833.1  5 ItreeLkralallglkglseeevdilfrefDtdgd 39
                +++eeL+ + ++ g++ ++++ev+ +++ +D +g+
  MMETSP1325-20131115|8998_1 14 LSAEELYVITKKCGME-VTAKEVRRVVNYLDGNGN 47
                789*****99999***.**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|9001_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   12.2   4.1       0.16   11.9   2.9    1.3  1  PF11521.3  C-terminal general transcription factor TFIIE alpha
       0.49   10.5  17.5       0.58   10.3  12.1    1.1  1  PF09026.5  Centromere protein B dimerisation domain
       0.87    9.0   7.2       0.73    9.3   5.0    1.1  1  PF04546.8  Sigma-70, non-essential region
        1.5    8.4   5.6        1.7    8.2   3.9    1.1  1  PF04050.9  Up-frameshift suppressor 2
        4.5    6.6  14.2        5.2    6.4   9.9    1.1  1  PF03066.10 Nucleoplasmin
        5.1    5.5  18.5        5.8    5.3  12.8    1.1  1  PF10446.4  Protein of unknown function (DUF2457)
          8    6.1  13.9          8    6.1   9.6    1.0  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        9.6    5.8   7.7         11    5.6   5.3    1.1  1  PF08595.6  RXT2-like, N-terminal


Domain annotation for each model (and alignments):
>> PF11521.3  C-terminal general transcription factor TFIIE alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.9   9.1e-05      0.16      23      46 ..      13      36 ..       2      48 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 9.1e-05
   PF11521.3 23 vdeedededdefeevedepvvmVa 46
                 deed ++dd+ ++ +d++vv+Va
  MMETSP1325-20131115|9001_1 13 DDEEDAADDDDDDDDDDDEVVSVA 36
                577788888888899999999998 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3  12.1   0.00034      0.58      16      42 ..       7      33 ..       1      41 [. 0.78

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00034
   PF09026.5 16 seeeeedeeedeededeedeeeddevp 42
                 +++e d+eed  d+d++d+++ddev 
  MMETSP1325-20131115|9001_1  7 GDDDEGDDEEDAADDDDDDDDDDDEVV 33
                578889999999999999999999985 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   5.0   0.00042      0.73      45      65 ..      11      30 ..       1      55 [. 0.56

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00042
   PF04546.8 45 seddeeeeeddddddededee 65
                + ddee+++d dddd+d+d++
  MMETSP1325-20131115|9001_1 11 EGDDEEDAAD-DDDDDDDDDD 30
                2222222222.2222222222 PP

>> PF04050.9  Up-frameshift suppressor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.9   0.00099       1.7      22      47 ..       8      31 ..       2      44 .. 0.42

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00099
   PF04050.9 22 ddessdeeeeeeedeeedeeseseee 47
                dd++ d+ee+ ++d+++  + ++++e
  MMETSP1325-20131115|9001_1  8 DDDEGDDEEDAADDDDD--DDDDDDE 31
                22222222222222221..1122222 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   9.9     0.003       5.2     118     140 ..       9      31 ..       2      38 .. 0.51

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.003
                 ----XXXXXXXXXXXXXXXXXXX CS
  PF03066.10 118 eddeedeeeeddeedddeeeeee 140
                 +d+ +dee+  d++ddd+++++e
  MMETSP1325-20131115|9001_1   9 DDEGDDEEDAADDDDDDDDDDDE 31 
                 34444444444444444444444 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  12.8    0.0034       5.8      58      81 ..       8      31 ..       2      41 .. 0.53

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0034
   PF10446.4 58 ddeeddddeDeddddddddeDded 81
                dd+e dd+eD  ddddddd+Dd++
  MMETSP1325-20131115|9001_1  8 DDDEGDDEEDAADDDDDDDDDDDE 31
                444444444444444444333332 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   9.6    0.0047         8     257     291 ..       4      57 ..       2      59 .] 0.59

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0047
                 XXXXXXXXXXXXXX..XXXXXXXXXXXXXX..................------- CS
   PF03153.8 257 vDGagddssdesee..deeadedeeekdkv..................ieeDldd 291
                  DG +dd+ d++e+  d+++d+d+ ++d+v                    eD+++
  MMETSP1325-20131115|9001_1   4 CDGGDDDEGDDEEDaaDDDDDDDD-DDDEVvsvavawfepprldpsvwSTEDPLE 57 
                 599999998855554333333333.333334677777777777777776667665 PP

>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   5.3    0.0066        11      62      83 ..       9      30 ..       3      42 .. 0.44

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0066
   PF08595.6 62 lddededdeeeededeeeaeen 83
                +d+ d++++  +d+d+++++++
  MMETSP1325-20131115|9001_1  9 DDEGDDEEDAADDDDDDDDDDD 30
                2222222222222222222223 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 282.77
//
Query:       MMETSP1325-20131115|9003_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.63
# Mc/sec: 315.71
//
Query:       MMETSP1325-20131115|9004_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 589.50
//
Query:       MMETSP1325-20131115|9006_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-14   53.6   0.0      2e-14   53.4   0.0    1.1  1  PF03720.10 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain


Domain annotation for each model (and alignments):
>> PF03720.10  UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.0   1.5e-18     2e-14       1      57 [.      15      70 ..      15      81 .. 0.87

  Alignments for each domain:
  == domain 1    score: 53.4 bits;  conditional E-value: 1.5e-18
  PF03720.10  1 avlGlaFKkntdDlReSpaldiieeLleegaevkiyDPkvkeeaaealleeknvelv 57
                a++G+aFKk+t D+Re+++  ++++Ll+e a++++yDP+v++e + ++++ +++++ 
  MMETSP1325-20131115|9006_1 15 AIFGFAFKKDTGDTRETASAFVCRDLLDERAKLEVYDPQVSRETMLMEMD-YTLKVN 70
                79*****************************************9988765.555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|9007_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|9008_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-50  168.2  15.4    3.6e-13   49.3   0.0    5.1  5  PF00415.13 Regulator of chromosome condensation (RCC1) repeat
    1.5e-28   97.5  22.4    9.6e-09   34.5   0.3    5.2  5  PF13540.1  Regulator of chromosome condensation (RCC1) repeat
  ------ inclusion threshold ------
      0.014   15.4   0.6        3.1    7.8   0.1    2.9  3  PF13938.1  Domain of unknown function (DUF4213)
      0.028   14.1   0.0        1.1    8.9   0.0    2.3  2  PF12345.3  Protein of unknown function (DUF3641)


Domain annotation for each model (and alignments):
>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.0   1.1e-16   3.6e-13       3      51 .]       4      51 ..       2      51 .. 0.97
   2 !   18.9   0.0   3.5e-07    0.0012       1      40 [.      54      92 ..      54     105 .. 0.69
   3 !   47.0   0.1   5.9e-16     2e-12       2      50 ..     109     156 ..     108     157 .. 0.98
   4 !   48.4   0.0   2.1e-16   7.1e-13       5      50 ..     164     208 ..     161     209 .. 0.96
   5 !   10.1   2.4   0.00019      0.64       2      13 ..     213     224 .]     212     224 .] 0.96

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 1.1e-16
                EEEEE---------.--------S-EE-GGG------EEE-----EEEE CS
  PF00415.13  3 rVysWGrndyGqLGkggseenvlvPvkveglsgvrvvqvacGgsHtlal 51
                +V+s+G+n+yG LG +g++ +++ P +v++ +g  ++qv++G+ Ht++l
  MMETSP1325-20131115|9008_1  4 KVFSFGQNSYGELG-HGDTTERHSPELVQFCRGLDIIQVCAGNEHTVLL 51
                69************.*******************************986 PP

  == domain 2    score: 18.9 bits;  conditional E-value: 3.5e-07
                TTEEEEE---------.--------S-EE-GGG------E CS
  PF00415.13  1 dGrVysWGrndyGqLGkggseenvlvPvkveglsgvrvvq 40
                +G+V+++G nd Gq+G   s+ +    +k+  ++g+r+ q
  MMETSP1325-20131115|9008_1 54 SGSVFACGYNDSGQCG-ISSATRIPMLRKIDAFEGRRIAQ 92
                69**************.55444444334477777766666 PP

  == domain 3    score: 47.0 bits;  conditional E-value: 5.9e-16
                 TEEEEE---------.--------S-EE-GGG------EEE-----EEE CS
  PF00415.13   2 GrVysWGrndyGqLGkggseenvlvPvkveglsgvrvvqvacGgsHtla 50 
                 G++ys+G n +GqLG +g+  +v  P++v+ l g rv +vac ++Ht++
  MMETSP1325-20131115|9008_1 109 GELYSCGYNARGQLG-HGQITQVPSPRLVTALLGMRVEKVACSYYHTVV 156
                 99*************.*******************************97 PP

  == domain 4    score: 48.4 bits;  conditional E-value: 2.1e-16
                 EEE---------.--------S-EE-GGG------EEE-----EEE CS
  PF00415.13   5 ysWGrndyGqLGkggseenvlvPvkveglsgvrvvqvacGgsHtla 50 
                 +++Grnd+GqLG   ++ + ++P+++e l+g+ v++ acG +Ht+a
  MMETSP1325-20131115|9008_1 164 FGFGRNDFGQLG-CEHQTDSSTPQRIEALEGKTVKDLACGQYHTIA 208
                 9***********.*******************************98 PP

  == domain 5    score: 10.1 bits;  conditional E-value: 0.00019
                 TEEEEE------ CS
  PF00415.13   2 GrVysWGrndyG 13 
                 G+Vy+WG+ndyG
  MMETSP1325-20131115|9008_1 213 GGVYAWGKNDYG 224
                 99*********9 PP

>> PF13540.1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00043       1.5      17      29 ..       2      14 ..       1      15 [. 0.88
   2 !   34.0   1.1     4e-12   1.4e-08       1      30 []      38      67 ..      38      67 .. 0.98
   3 !   17.0   0.4   8.9e-07     0.003       8      30 .]      99     121 ..      90     121 .. 0.87
   4 !   16.8   0.5     1e-06    0.0035       1      30 []     144     173 ..     144     173 .. 0.98
   5 !   34.5   0.3   2.8e-12   9.6e-09       1      29 [.     196     224 .]     196     224 .] 0.98

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00043
                ---EEEE---TTS CS
   PF13540.1 17 dGaVlcWGsNssG 29
                d +V+++G+Ns+G
  MMETSP1325-20131115|9008_1  2 DRKVFSFGQNSYG 14
                668*********9 PP

  == domain 2    score: 34.0 bits;  conditional E-value: 4e-12
                --EEE-----EEEE-.---EEEE---TTST CS
   PF13540.1  1 VvsvsaGgyHtcaLtsdGaVlcWGsNssGQ 30
                +++v+aG+ Ht+ L s+G+V+++G N+sGQ
  MMETSP1325-20131115|9008_1 38 IIQVCAGNEHTVLLSSSGSVFACGYNDSGQ 67
                79***************************9 PP

  == domain 3    score: 17.0 bits;  conditional E-value: 8.9e-07
                 ---EEEE-.---EEEE---TTST CS
   PF13540.1   8 gyHtcaLtsdGaVlcWGsNssGQ 30 
                   H +a+ + G+++++G N  GQ
  MMETSP1325-20131115|9008_1  99 CEHLLAVSDTGELYSCGYNARGQ 121
                 4899******************9 PP

  == domain 4    score: 16.8 bits;  conditional E-value: 1e-06
                 --EEE-----EEEE-.---EEEE---TTST CS
   PF13540.1   1 VvsvsaGgyHtcaLtsdGaVlcWGsNssGQ 30 
                 V++v++ +yHt++ +++G+ +++G+N++GQ
  MMETSP1325-20131115|9008_1 144 VEKVACSYYHTVVAVAGGSWFGFGRNDFGQ 173
                 789**************************9 PP

  == domain 5    score: 34.5 bits;  conditional E-value: 2.8e-12
                 --EEE-----EEEE-.---EEEE---TTS CS
   PF13540.1   1 VvsvsaGgyHtcaLtsdGaVlcWGsNssG 29 
                 V+++++G yHt+a +++G V++WG N++G
  MMETSP1325-20131115|9008_1 196 VKDLACGQYHTIAAMEGGGVYAWGKNDYG 224
                 89**************************9 PP

>> PF13938.1  Domain of unknown function (DUF4213)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.01        36      10      60 ..      34      90 ..      27     101 .. 0.61
   2 ?    7.8   0.1   0.00091       3.1      11      64 ..     141     200 ..     134     205 .. 0.87
   3 ?    2.6   0.0     0.038   1.3e+02       7      31 ..     189     213 ..     181     215 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.01
                GG-EEEEEE----EEEEE----B---EE--GGG-...........S-S----SS--H CS
   PF13938.1 10 edlrvedvviGlswtlVklsnGslGvAytpreee...ssarr...lpeageligksa 60
                 +l + +v+ G ++t+  +s+Gs+  +   +++    ssa+r   l+    ++g+++
  MMETSP1325-20131115|9008_1 34 RGLDIIQVCAGNEHTVLLSSSGSVFACGYNDSGQcgiSSATRipmLRKIDAFEGRRI 90
                477888999999999999998866444333222247755544122444445555555 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.00091
                 G-EEEEEE----EEEEE----.B---EE--GGG-..........S-S----SS--HHHHH CS
   PF13938.1  11 dlrvedvviGlswtlVklsnG.slGvAytpreee.....ssarrlpeageligksaeela 64 
                 + rve+v +++ +t+V    G + G+  +  ++      ++ ++ ++ + l+gk++++la
  MMETSP1325-20131115|9008_1 141 GMRVEKVACSYYHTVVAVAGGsWFGFGRNDFGQLgcehqTDSSTPQRIEALEGKTVKDLA 200
                 679******************999***999999988866666668999999999999987 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.038
                 HHGGG-EEEEEE----EEEEE---- CS
   PF13938.1   7 esaedlrvedvviGlswtlVklsnG 31 
                 e +e+++v+d+ +G  +t++  + G
  MMETSP1325-20131115|9008_1 189 EALEGKTVKDLACGQYHTIAAMEGG 213
                 567899********99999998854 PP

>> PF12345.3  Protein of unknown function (DUF3641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.017        59      72     115 ..      48      91 ..      41      99 .. 0.70
   2 ?    8.9   0.0   0.00032       1.1      69      94 ..      99     124 ..      92     162 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.017
   PF12345.3  72 llsvdwdGelydCdfnqmlelklkkekktlkdlleae.leereia 115
                 ++ ++ +G+++ C +n   ++ +++++ ++  l + + +e+r+ia
  MMETSP1325-20131115|9008_1  48 TVLLSSSGSVFACGYNDSGQCGISSAT-RIPMLRKIDaFEGRRIA 91 
                 5667889*********99998886655.56555554435666665 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00032
   PF12345.3  69 CrsllsvdwdGelydCdfnqmlelkl 94 
                 C +ll+v+ +Gely C +n   +l  
  MMETSP1325-20131115|9008_1  99 CEHLLAVSDTGELYSCGYNARGQLGH 124
                 99*****************9877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1118.30
//
Query:       MMETSP1325-20131115|9011_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.057   12.8   0.0          2    7.9   0.0    2.2  2  PF10371.4  Domain of unknown function
      0.083   10.5   1.0      0.096   10.3   0.7    1.1  1  PF05993.7  Reovirus major virion structural protein Mu-1/Mu-1C (M2)
       0.11   12.7   0.2       0.16   12.3   0.2    1.2  1  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF10371.4  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0   0.00044         2      33      57 ..      15      39 ..       2      40 .. 0.87
   2 ?    3.1   0.0     0.014        62      17      34 ..      66      88 ..      43      92 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00044
                --S-GGGS-----B----GGGT--- CS
   PF10371.4 33 deLPVSafpedGtfplGTaayEKRg 57
                d++P++++ +d t  + T+++ KRg
  MMETSP1325-20131115|9011_1 15 DSVPIDELMADPTLKMITTSLAKRG 39
                67**********************8 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.014
                -.....HHHHHTHHHHHTT---- CS
   PF10371.4 17 P.....efvknilepinalkGde 34
                P     ++v+++ + ++++ Gd+
  MMETSP1325-20131115|9011_1 66 PsmsssKMVETVWAACVRIIGDD 88
                1444459************9997 PP

>> PF05993.7  Reovirus major virion structural protein Mu-1/Mu-1C (M2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.7   2.1e-05     0.096     251     307 ..      36      93 ..      16      97 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 2.1e-05
                 S---------S-HHHHHHHS-BTTB--HHHHHHHHHHHHHHHHHH-HHHHT-SS.-EE CS
   PF05993.7 251 vkegdvqaealnevaaaalaasaevgsleeksklleqaidlvaakeleliealv.PlP 307
                  k g++q  a   v++aa aa +++++l + s   ++ +++v a+ + +i  +  P+P
  MMETSP1325-20131115|9011_1  36 AKRGNIQLPASAPVSTAAGAAVSQAPTLAGPSMSSSKMVETVWAACVRIIGDDAgPVP 93 
                 45678888888999***********************************987643776 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   3.4e-05      0.16      32      64 ..      16      61 ..       6      67 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.4e-05
  PF00428.14 32 gkdikeliangsakla.............aaaaaaaaaaaaaaaaa 64
                ++ i+el+a+++ k+              a+a++++aa+aa+++a+
  MMETSP1325-20131115|9011_1 16 SVPIDELMADPTLKMIttslakrgniqlpASAPVSTAAGAAVSQAP 61
                5679999999999999999999999999999999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 541.79
//
Query:       MMETSP1325-20131115|9010_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00031   19.8  10.3    0.00031   19.8   7.1    2.9  2  PF04886.7 PT repeat
  ------ inclusion threshold ------
        1.5    6.5  24.6        1.5    6.5  17.0    1.0  1  PF05109.8 Herpes virus major outer envelope glycoprotein (BLLF1)


Domain annotation for each model (and alignments):
>> PF04886.7  PT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   7.1   4.6e-08   0.00031       5      32 ..      59      86 ..      57      88 .. 0.67
   2 ?    2.2  20.3     0.015     1e+02       1      35 [.      84     110 ..      79     125 .. 0.59

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 4.6e-08
   PF04886.7  5 qPteqPTvqPTgqPtaqPTdqPtaqPtd 32
                 Pt+ P  +PT +Pt +PT+ P+ +Pt+
  MMETSP1325-20131115|9010_1 59 KPTSAPVAAPTSAPTLEPTARPSLEPTT 86
                5777777777777777777777777775 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.015
   PF04886.7   1 qpTaqPteqPTvqPTgqPtaqPTdqPtaqPtdaPt 35 
                 ++Ta         P++ P++ PT +Pta+Pt+aPt
  MMETSP1325-20131115|9010_1  84 PTTAS--------PAASPSSAPTLSPTASPTSAPT 110
                 34555........5555555555555555555554 PP

>> PF05109.8  Herpes virus major outer envelope glycoprotein (BLLF1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  17.0   0.00022       1.5     464     543 ..      55     134 ..      17     136 .] 0.76

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00022
   PF05109.8 464 vstedptsttptGttss.klpevtsPtsavtsatpnatsptsvvttpnatsptlqktsdtpnatspttvvigststatspp 543
                 vs + pts+ ++  ts+ +l  ++ P    t+a+  a+sp+s+ t    +spt+  t+ +p  tsptt  + + +++++++
  MMETSP1325-20131115|9010_1  55 VSIAKPTSAPVAAPTSApTLEPTARPSLEPTTAS-PAASPSSAPTLSPTASPTSAPTTSAPTTTSPTTTTTVVSPVVPVSS 134
                 6778899988888888514444455665666664.4678999999666778888888888999999999999999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.41s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 651.81
//
Query:       MMETSP1325-20131115|9013_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 630.88
//
Query:       MMETSP1325-20131115|9015_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-21   75.4   0.3    5.4e-21   74.7   0.2    1.3  1  PF01399.22 PCI domain
    4.4e-11   42.6   0.5    5.7e-11   42.2   0.3    1.1  1  PF10075.4  COP9 signalosome, subunit CSN8
  ------ inclusion threshold ------
      0.016   14.5   0.5      0.019   14.3   0.4    1.1  1  PF03399.11 SAC3/GANP/Nin1/mts3/eIF-3 p25 family


Domain annotation for each model (and alignments):
>> PF01399.22  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.2   1.2e-24   5.4e-21       4     101 ..      45     142 ..      42     145 .. 0.95

  Alignments for each domain:
  == domain 1    score: 74.7 bits;  conditional E-value: 1.2e-24
                 XXXXXXXXXXXXXXXXXXXXXX.....XXXXXXX------HHHHHHHHHHHHHS-SEE-TTT----SSS-HHHHHHHHHHHHH-------B-S----E CS
  PF01399.22   4 sdllkalrsgnlsgfseelkdleeelladdglsqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIadgelrakidqpsgiv 101
                   l +a++ ++l +f+++l d ++++l d+++  ++e L++++re++l  ++++y++i++e +ak+l+l v+evE +lv++I d+++ +kidq +g +
  MMETSP1325-20131115|9015_1  45 NSLRSAYEANDLVSFERTLLDKSSRILSDPFIMMYVEPLRRRMREQVLLVLVQPYHRIRIEFVAKELKLEVSEVEHLLVDMILDKRVFGKIDQINGFL 142
                 56788999999************************************************************************************987 PP

>> PF10075.4  COP9 signalosome, subunit CSN8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.3   1.3e-14   5.7e-11       3     120 ..       7     124 ..       5     132 .. 0.89

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 1.3e-14
   PF10075.4   3 kaelytliLlkaLtqndiadfrlllkrlpaaikesdeeiqkllsLeqlLeendyakfwqtlksn...dlse.dltafvagleelvRkeiaelvgkaYesIsadvlaelLglsdeelekfvve 120
                 k+ l + +L+++L+ +di+ f ++ +    a ke+ +ei ++ sL +++e nd  +f  tl ++    ls+ +++  v+ l++ +R++++ ++ ++Y +I++++ a+ L l+++e+e++ v+
  MMETSP1325-20131115|9015_1   7 KDALKYVVLANMLALSDINPFAAQEA---IAFKEE-KEIVAMNSLRSAYEANDLVSFERTLLDKssrILSDpFIMMYVEPLRRRMREQVLLVLVQPYHRIRIEFVAKELKLEVSEVEHLLVD 124
                 6678899*****************99...666776.9*********************9886543445666799999****************************************99876 PP

>> PF03399.11  SAC3/GANP/Nin1/mts3/eIF-3 p25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.4   4.2e-06     0.019      97     203 ..       5     112 ..       1     113 [. 0.78

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.2e-06
  PF03399.11  97 neaefvayiLLyalvadpspdfnlelellpaelrtdpliqhalqleaaleegnyarffklleskdvpylmaclleifen....aiRkealkaiskayrssiplkflaelLg 203
                 + ++ + y++L ++ a   +d+n   ++    + ++++i    +l++a+e ++ ++f ++l +k+ + l  +++ ++++    ++R ++l ++ + y++ i ++f+a++L+
  MMETSP1325-20131115|9015_1   5 RAKDALKYVVLANMLAL--SDINPFAAQEAIAFKEEKEIVAMNSLRSAYEANDLVSFERTLLDKSSRILSDPFIMMYVEplrrRMREQVLLVLVQPYHR-IRIEFVAKELK 112
                 56666788888888777..8888877775445999**************************5555555556665555542222888999*********9.********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.49
# Mc/sec: 792.26
//
Query:       MMETSP1325-20131115|9014_1  [L=401]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-48  161.3   0.1    2.2e-47  159.4   0.0    1.9  2  PF13793.1  N-terminal domain of ribose phosphate pyrophosphokinase
    5.5e-11   42.1   0.1    2.4e-10   40.0   0.0    2.1  2  PF00156.22 Phosphoribosyl transferase domain
    5.9e-05   22.8   0.2    8.3e-05   22.3   0.1    1.1  1  PF03105.14 SPX domain
     0.0014   18.0   0.1      0.013   14.8   0.0    2.5  4  PF02698.12 DUF218 domain


Domain annotation for each model (and alignments):
>> PF13793.1  N-terminal domain of ribose phosphate pyrophosphokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.4   0.0   6.3e-51   2.2e-47       1     116 []      76     192 ..      76     192 .. 0.99
   2 ?   -1.3   0.0      0.46   1.6e+03      42      73 ..     285     312 ..     280     324 .. 0.62

  Alignments for each domain:
  == domain 1    score: 159.4 bits;  conditional E-value: 6.3e-51
   PF13793.1   1 lkivsgssskelaekiakalgvelgkisvkrfadgeikveieesvrgkdvfivqslsksvndnlmelliiidalkrasAkritaViPylgysrqdrk.ksrepitaklvaqlLeaaG 116
                 +k+++gs++++lae++a++lgv+ ++++++rf+dge +++i e+vrg+dvfivq++s++vndnlmell++i+a++rasA r+taV+Py+gy+rqdrk + r+pi+a+ va++Lea+G
  MMETSP1325-20131115|9014_1  76 MKLIAGSANRALAEELAARLGVPITECNCERFNDGECSIQIMENVRGNDVFIVQPTSPPVNDNLMELLLMISAVRRASAARVTAVVPYYGYARQDRKdRARVPISAADVARMLEAMG 192
                 79***********************************************************************************************888****************9 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.46
   PF13793.1  42 eesvrgkdvfivqslsksvndnlmelliiida 73 
                   sv+g+d +iv ++       + +l+  ++ 
  MMETSP1325-20131115|9014_1 285 VGSVEGCDTIIVDDMIDT----AGTLTQAANE 312
                 568999999999887754....3344444444 PP

>> PF00156.22  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.3   4.3e+03      41      53 ..      87      99 ..      84     104 .. 0.75
   2 !   40.0   0.0     7e-14   2.4e-10      25     119 ..     233     321 ..     225     327 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.3
                -HHHHHHHHHHHH CS
  PF00156.22 41 latelaraLglpl 53
                la+ela++Lg+p+
  MMETSP1325-20131115|9014_1 87 LAEELAARLGVPI 99
                6778888887775 PP

  == domain 2    score: 40.0 bits;  conditional E-value: 7e-14
                 T----EEEEEE------HHHHHHHHHH.HHHH-----SS-SEE---------EEEEES-GGGGTTSEEEEEEEEE----HHHH---TTTT----EE CS
  PF00156.22  25 kgkkdvvvGiargGvplatelaraLgl.pldlvrvrkssapassetsrkreaailesrpeedlkgkrvliVDDvlatGgTlraaielLkeagakev 119
                 + +++v+v +++gGv  a++  + L +  l   +       a  +++r+r  +++++++  +++g + +iVDD+++t gTl+ a++ Lk++ga++v
  MMETSP1325-20131115|9014_1 233 NLQNPVIVSPDAGGVARAKAFLEGLLAaGLHPSL-------AVIIKQRSRPGVVGSMNLVGSVEGCDTIIVDDMIDTAGTLTQAANELKNFGAERV 321
                 567889*****************99996455554.......36789***********************************************987 PP

>> PF03105.14  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   2.4e-08   8.3e-05     246     265 ..       4      23 ..       2      31 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 2.4e-08
  PF03105.14 246 LNrtAfrKIlKKyDKqtgss 265
                 LN+ Af+KI+KKyDK+++++
  MMETSP1325-20131115|9014_1   4 LNFQAFSKIMKKYDKHMNYR 23 
                 9****************987 PP

>> PF02698.12  DUF218 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.8e-06     0.013      22      69 ..      43      98 ..      32     105 .. 0.74
   2 ?   -3.4   0.0       1.6   5.4e+03      86     103 ..     181     198 ..     178     199 .. 0.68
   3 ?   -1.2   0.0      0.32   1.1e+03      35      80 ..     232     275 ..     225     276 .. 0.71
   4 ?   -3.0   0.0       1.2   4.1e+03      75     101 ..     295     321 ..     287     330 .. 0.67

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.8e-06
  PF02698.12 22 laeRldaaaelyragkapriivsGgagkgegvseaevm.........arylvelgvp 69
                  +Rlda +e+yr+ + + ++ sGgag g g+ e +++         ++++++lgvp
  MMETSP1325-20131115|9014_1 43 KNSRLDAVLEMYRSVRSSMVVSSGGAGTG-GRMEMKLIagsanralaEELAARLGVP 98
                578**************************.666666554443333325555555776 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 1.6
  PF02698.12  86 arfsaelleerglrrvll 103
                 a+ +a++le  g++rv +
  MMETSP1325-20131115|9014_1 181 AADVARMLEAMGVDRVCC 198
                 566777777777777765 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 0.32
  PF02698.12  35 agkapriivsGgagkgegvseaevmarylvelg.vpaeaillepqsr 80 
                 ++ + ++ivs    +  gv +a+++ + l+++g  p+ a+++ ++sr
  MMETSP1325-20131115|9014_1 232 KNLQNPVIVSP---DAGGVARAKAFLEGLLAAGlHPSLAVIIKQRSR 275
                 47788899994...222789999999999999835677888888876 PP

  == domain 4    score: -3.0 bits;  conditional E-value: 1.2
  PF02698.12  75 lepqsrnTyeNarfsaelleerglrrv 101
                 + ++  +T++ ++++a+ l++ g++rv
  MMETSP1325-20131115|9014_1 295 IVDDMIDTAGTLTQAANELKNFGAERV 321
                 455566777777777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       420  (0.0307197); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.38s 00:00:01.10 Elapsed: 00:00:00.51
# Mc/sec: 1884.19
//
Query:       MMETSP1325-20131115|9016_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0038   16.8   2.6     0.0049   16.5   1.8    1.2  1  PF06716.6  Protein of unknown function (DUF1201)
  ------ inclusion threshold ------
      0.033   13.8   0.7      0.042   13.5   0.5    1.2  1  PF10857.3  Protein of unknown function (DUF2701)
      0.057   13.7   0.0        0.1   12.9   0.0    1.4  1  PF11673.3  Protein of unknown function (DUF3269)
       0.07   13.3   1.3       0.11   12.7   0.9    1.3  1  PF02370.11 M protein repeat
        1.7    8.0   4.0        2.4    7.5   0.0    2.0  2  PF00517.12 Retroviral envelope protein


Domain annotation for each model (and alignments):
>> PF06716.6  Protein of unknown function (DUF1201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   1.8   1.8e-06    0.0049      13      48 ..       3      39 ..       1      44 [. 0.84

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.8e-06
   PF06716.6 13 fGfliclflfc.lvvfiWfvykqilfrttaqsnearf 48
                +G+++c+fl   +v f++++ykq  f +   s e+r 
  MMETSP1325-20131115|9016_1  3 LGWIVCIFLVYfIVRFVFWLYKQDGFEKIRISMETRQ 39
                699*****9651566***********99999999986 PP

>> PF10857.3  Protein of unknown function (DUF2701)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.5   1.5e-05     0.042       6      35 ..       6      35 ..       2      49 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.5e-05
   PF10857.3  6 vvivilvylllyLvkwslvkdalnkikiki 35
                +v ++lvy+++ +v w + +d ++ki+i +
  MMETSP1325-20131115|9016_1  6 IVCIFLVYFIVRFVFWLYKQDGFEKIRISM 35
                67889**********************976 PP

>> PF11673.3  Protein of unknown function (DUF3269)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.8e-05       0.1       6      27 ..      20      41 ..      16      49 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.8e-05
   PF11673.3  6 yyLYradGteeikvakekdnvn 27
                ++LY++dG e+i++  e+ +  
  MMETSP1325-20131115|9016_1 20 FWLYKQDGFEKIRISMETRQSS 41
                9*************99887655 PP

>> PF02370.11  M protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.9   4.1e-05      0.11       4      21 .]      46      63 ..      45      63 .. 0.95

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.1e-05
  PF02370.11  4 keLEaelqeLeeelqaLe 21
                k+LEa+++eL+++  aLe
  MMETSP1325-20131115|9016_1 46 KNLEATVAELQAKVAALE 63
                99*************998 PP

>> PF00517.12  Retroviral envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   1.1      0.05   1.4e+02     156     178 ..       2      24 ..       1      42 [. 0.78
   2 ?    7.5   0.0   0.00089       2.4      36      61 ..      43      65 ..      28      71 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.05
  PF00517.12 156 iikigililliiivlrilvkvlr 178
                  +++++ i+l+++++r+++ +++
  MMETSP1325-20131115|9016_1   2 CLGWIVCIFLVYFIVRFVFWLYK 24 
                 58999999999999999887765 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.00089
  PF00517.12 36 llelringlenvVlvlgarVtaleky 61
                +++   ++le++V +l+a+V ale  
  MMETSP1325-20131115|9016_1 43 MFR---KNLEATVAELQAKVAALEAI 65
                555...89***************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       883  (0.0645846); expected 273.4 (0.02)
Passed bias filter:                      809  (0.059172); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|9019_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0014   17.6   0.0     0.0015   17.4   0.0    1.1  1  PF02900.13 Catalytic LigB subunit of aromatic ring-opening dioxygenase
     0.0064   16.2   2.6      0.068   13.0   0.2    3.0  3  PF01436.16 NHL repeat


Domain annotation for each model (and alignments):
>> PF02900.13  Catalytic LigB subunit of aromatic ring-opening dioxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   2.2e-07    0.0015      38      83 ..      47      89 ..      17      93 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 2.2e-07
  PF02900.13 38 aeakpdvivvvspdwetgffedvtpafcvglaetpegihdfggfpd 83
                 +++pd+ivv +++++  +fe++  +  + ++ + +gi++++ fp 
  MMETSP1325-20131115|9019_1 47 SGLRPDLIVVDANHHRLQIFEEGRGP--LVCGGRGDGIGELN-FPV 89
                345***********************..6666666*****99.885 PP

>> PF01436.16  NHL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.061   4.2e+02       1      18 [.      21      39 ..      21      43 .. 0.81
   2 !   13.0   0.2   9.9e-06     0.068      14      28 .]      52      66 ..      52      66 .. 0.95
   3 ?    0.0   0.0      0.13   8.6e+02       1      10 [.      85      94 ..      85      96 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.061
                -SSBEEEEE-.TT--EEEE CS
  PF01436.16  1 lnnPhGvavd.sdGdvyVa 18
                +  P++v     d d++Va
  MMETSP1325-20131115|9019_1 21 FGTPTDVECVeADEDLLVA 39
                6679999888899999998 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 9.9e-06
                -EEEEEGCCTEEEEE CS
  PF01436.16 14 dvyVaDsenhrvqvf 28
                d++V D ++hr+q+f
  MMETSP1325-20131115|9019_1 52 DLIVVDANHHRLQIF 66
                689***********9 PP

  == domain 3    score: 0.0 bits;  conditional E-value: 0.13
                -SSBEEEEE- CS
  PF01436.16  1 lnnPhGvavd 10
                ln+P +va  
  MMETSP1325-20131115|9019_1 85 LNFPVSVAWH 94
                799****975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 494.25
//
Query:       MMETSP1325-20131115|9018_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 648.43
//
Query:       MMETSP1325-20131115|9020_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-20   71.3   0.2      1e-19   71.1   0.1    1.0  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
      0.032   13.5   0.0      0.038   13.3   0.0    1.1  1  PF08694.6  Ubiquitin-fold modifier-conjugating enzyme 1
      0.089   11.1   0.0      0.089   11.1   0.0    1.1  1  PF03051.10 Peptidase C1-like family
       0.14   11.8   0.3       0.28   10.9   0.2    1.5  1  PF02751.9  Transcription initiation factor IIA, gamma subunit


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.1     3e-23     1e-19       2      59 ..      19      74 .]      18      74 .] 0.96

  Alignments for each domain:
  == domain 1    score: 71.1 bits;  conditional E-value: 3e-23
                TSB--CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH- CS
  PF00112.18  2 pesvDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCs 59
                p+++Dwr+  gav++vk+q+ CGsCW+fs+++ +eg ++++t ++l++lSeq++v C+
  MMETSP1325-20131115|9020_1 19 PTDFDWRTL-GAVSSVKNQKYCGSCWTFSTAADVEGTHFLAT-DELLDLSEQQIVACD 74
                99******7.5*******************************.7*************7 PP

>> PF08694.6  Ubiquitin-fold modifier-conjugating enzyme 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.1e-05     0.038      33      71 ..       7      47 ..       4      57 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.1e-05
   PF08694.6 33 yaalikyvennkkedndwlkle..snkegtrwkgkcwyvhn 71
                +  l +y++ n+ +d dw +l   s  + +++ g cw    
  MMETSP1325-20131115|9020_1  7 FPGLKNYTNDNRPTDFDWRTLGavSSVKNQKYCGSCWTFST 47
                567889**************98556677889******9765 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.6e-05     0.089      56      73 ..      31      48 ..      10      67 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.6e-05
  PF03051.10 56 devtnqkqsGRCWlFaal 73
                 +v nqk  G CW F++ 
  MMETSP1325-20131115|9020_1 31 SSVKNQKYCGSCWTFSTA 48
                4799***********986 PP

>> PF02751.9  Transcription initiation factor IIA, gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   8.2e-05      0.28      16      51 ..      37      74 .]      31      74 .] 0.78

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8.2e-05
                --BTTEEEEEEEEEEEEEE...---EEEEEEEEEEEEEE CS
   PF02751.9 16 rfCddVWTFivknvqvkle...dneeevkvdklkIVACn 51
                ++C   WTF    ++v  +    ++e ++ +  +IVAC+
  MMETSP1325-20131115|9020_1 37 KYCGSCWTFST-AADVEGThflATDELLDLSEQQIVACD 74
                79*******74.34454445567999************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|9022_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       551  (0.0403013); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 214.67
//
Query:       MMETSP1325-20131115|9023_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.33   10.6   3.2       0.19   11.4   0.5    1.7  2  PF10630.4 Protein of unknown function (DUF2476)


Domain annotation for each model (and alignments):
>> PF10630.4  Protein of unknown function (DUF2476)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.5   1.4e-05      0.19      44      84 ..      15      55 ..      10      97 .. 0.86
   2 ?   -0.5   0.0     0.058     8e+02      18      45 ..      97     120 ..      91     135 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.4e-05
   PF10630.4 44 PeledpaealtsvvvldagsaLrlPledvdlllelePtsvl 84
                P l  pa al  ++vl+    L+ Ple vdl +  +P+ v 
  MMETSP1325-20131115|9023_1 15 PVLLVPARALPEMLVLQVDHQLDEPLESVDLSVLHDPIEVE 55
                77788**************************9999997764 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.058
   PF10630.4  18 sqqtggPsPakrsrLeepagpeslaqPe 45 
                 +++  gP  ak++ L  p  pe+  +Pe
  MMETSP1325-20131115|9023_1  97 GRRRVGPVDAKQRHL--PVWPED--APE 120
                 566789999999999..888885..344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 693.95
//
Query:       MMETSP1325-20131115|9026_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 465.96
//
Query:       MMETSP1325-20131115|9024_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0086   16.1   0.1      0.017   15.2   0.1    1.6  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.2e-06     0.017      52     102 ..     201     242 ..     126     243 .] 0.70

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.2e-06
                 EEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24  52 ctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                 ++ ++        +  s+  f+i+ +    y+l+a s+ e+k+Wv+a +n+
  MMETSP1325-20131115|9024_1 201 IKARI--------EHISPENFVISIDGA-NYKLKAQSAAEAKEWVEAVQNS 242
                 33333........344677889999998.*******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       687  (0.0502487); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 1141.79
//
Query:       MMETSP1325-20131115|9029_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|9030_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0011   18.6   0.0     0.0029   17.3   0.0    1.7  1  PF08030.7 Ferric reductase NAD binding domain


Domain annotation for each model (and alignments):
>> PF08030.7  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   2.1e-07    0.0029      37     143 ..       3      96 ..       1     102 [. 0.68

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 2.1e-07
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
   PF08030.7  37 ikliwvvressslewfkdvLneleeeksegnieihiYlTseyeaedasdqlissiegenvdavsgtrfvkihfgRPnlkevlkdi.askhknssvgvfvCGppklvke 143
                 +++ wvv++  +   f d L   ++e   g +++++Y+ +++++++ ++ +i+                ++  gRPn+ e+++ +  + + + +  vfvCGpp+l+  
  MMETSP1325-20131115|9030_1   3 VHFLWVVQKCTDTVPFFDTLIDAQNEPLDGGFKVSVYVDRDDSCPAGTKGSING--------------FNVVGGRPNVPEMIEALtDDVASGLKPHVFVCGPPGLTAA 96 
                 566777666655555554554444444446777777777777777776655555..............678899***********44556677899********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 642.43
//
Query:       MMETSP1325-20131115|9031_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|9032_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|9033_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0032   16.6   0.0     0.0042   16.2   0.0    1.1  1  PF08123.8 Histone methylation protein DOT1


Domain annotation for each model (and alignments):
>> PF08123.8  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.1e-07    0.0042      75     159 ..      21      98 ..       7     112 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 3.1e-07
                 -HHHHHHHHHHHHHHHHHHHH-------B---SS-STT-HHHHHHGGG-SEEEE--TT--HHHHHHHHHHHTT-----EEEESS- CS
   PF08123.8  75 mdnaselaekqkeelkkrlklfGkklakiefirksFvenekveeiieeadvilvNNfaFdaelnkqlkellqdlkegtkiislks 159
                  d as++a + ++e++++l+      ++++   + F++ ++     ++adv + N   Fd+el ++l    ++lkeg+ +++l +
  MMETSP1325-20131115|9033_1  21 LDRASAVAARFTKEIRQYLSTE--SIQDVDVRAGGFLQHDW-----SDADVAFANTSCFDEELLEDLAVKCAQLKEGALVVTLGE 98 
                 5778888888888888888764..45566777899999887.....579********************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 973.84
//
Query:       MMETSP1325-20131115|9036_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   15.0   0.7       0.12   12.5   0.1    2.1  2  PF13524.1 Glycosyl transferases group 1
      0.069   11.1   0.2      0.082   10.9   0.2    1.0  1  PF12228.3 Protein of unknown function (DUF3604)
       0.13   11.9   0.9       0.29   10.8   0.3    1.7  2  PF07439.6 Protein of unknown function (DUF1515)


Domain annotation for each model (and alignments):
>> PF13524.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.12   5.3e+02      56      75 ..      16      34 ..      10      49 .. 0.77
   2 ?   12.5   0.1   2.6e-05      0.12      40      76 ..      76     113 ..      56     129 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.12
   PF13524.1 56 lryllanpeereaiaeaare 75
                + ++l ++  r+++a+aa +
  MMETSP1325-20131115|9036_1 16 VVKYL-DDNARSELAAAAIR 34
                44554.66788999999987 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 2.6e-05
   PF13524.1  40 gkeivlfe.dleelaeklryllanpeereaiaeaarer 76 
                 +k++ ++e + + l +k+++l +n +e+e++a+a  +r
  MMETSP1325-20131115|9036_1  76 DKTCQWYEvERKKLYRKVNKLVENKAEAEEVAAATMKR 113
                 57999****************************99888 PP

>> PF12228.3  Protein of unknown function (DUF3604)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   1.8e-05     0.082      62     144 ..      62     146 ..      45     152 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.8e-05
   PF12228.3  62 tDHaellGlvkaladekskls...akklkkelaelleeaeekaeeaaallikaaaaeelpealakeakegskvaksaWketveaae 144
                  DH el+G+++++ d++ +     +kkl +++++l+e+++e++e aaa+++++  + ++p++ + ++ + ++++ ++W+  + a +
  MMETSP1325-20131115|9036_1  62 IDHQELVGVLADARDKTCQWYeveRKKLYRKVNKLVENKAEAEEVAAATMKRDEHEVRCPAVST-KYYQLRALTAQDWSAPLPAED 146
                 5**************9987766778889999999999999999999999999999999998776.666777899999998766555 PP

>> PF07439.6  Protein of unknown function (DUF1515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.28   1.3e+03      19      42 ..      19      41 ..       7      63 .. 0.65
   2 ?   10.8   0.3   6.4e-05      0.29      26      74 ..      77     126 ..      56     137 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.28
   PF07439.6 19 elredlkrsedrsdasrakmyrkm 42
                 l +d  rse  ++a+r     k+
  MMETSP1325-20131115|9036_1 19 YL-DDNARSELAAAAIRPMALMKL 41
                33.344578888888886544444 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 6.4e-05
   PF07439.6  26 rsedrsdasrakmyrkmdelve.rvtalegsvvklkaditsvkevtedvk 74 
                 ++ +  ++ r k+yrk+++lve + +a e + +++k d  +v+  +   k
  MMETSP1325-20131115|9036_1  77 KTCQWYEVERKKLYRKVNKLVEnKAEAEEVAAATMKRDEHEVRCPAVSTK 126
                 455667899************9346788889999*999988876555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       818  (0.0598303); expected 273.4 (0.02)
Passed bias filter:                      608  (0.0444705); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 696.30
//
Query:       MMETSP1325-20131115|9037_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.6    7.6  10.2       0.24   11.0   4.2    1.4  2  PF07543.7  Protein trafficking PGA2


Domain annotation for each model (and alignments):
>> PF07543.7  Protein trafficking PGA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       0.4   5.4e+03      82      91 ..      14      23 ..       8      43 .. 0.56
   2 ?   11.0   4.2   1.8e-05      0.24      56     130 ..      59     134 ..      47     147 .. 0.65

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 0.4
   PF07543.7 82 tddEedeedv 91
                 d E+d +++
  MMETSP1325-20131115|9037_1 14 HDVEDDGAKN 23
                3334333333 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 1.8e-05
   PF07543.7  56 eraek.akisanalrgaatage.levedtddE...edeedvaeasavaeWGkkARkrqrkvikklleeeekkredaedde 130
                  + ek a +++  +r + ++ +  + e+  dE    d +  +  +a++e Gk+A  r ++ ++ ++e+e k +e    ++
  MMETSP1325-20131115|9037_1  59 SE-EKpADVGPGDTRPGFAHHQqQQQEEEKDEdgdRDGDGEEGEDAEIEVGKSAVGRYHERMEGVEENESKPEEF---ES 134
                 22.3358899998886655444345555555535434444567899*************9999988776554443...22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       472  (0.0345231); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.41s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 704.81
//
Query:       MMETSP1325-20131115|9038_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
          1    8.7   5.7        2.1    7.7   3.9    1.5  1  PF02412.13 Thrombospondin type 3 repeat


Domain annotation for each model (and alignments):
>> PF02412.13  Thrombospondin type 3 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.9   0.00016       2.1       4      20 ..      47      64 ..      45      69 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00016
  PF02412.13  4 DsDgvGDaC.dkDfDnDg 20
                DsD +G aC d DfD+ g
  MMETSP1325-20131115|9038_1 47 DSDREGEACrDGDFDGGG 64
                9**************854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.51
# Mc/sec: 1151.19
//
Query:       MMETSP1325-20131115|9035_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-12   47.3   1.1      2e-05   24.0   0.2    2.4  2  PF00571.23 CBS domain


Domain annotation for each model (and alignments):
>> PF00571.23  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.2   1.5e-09     2e-05      18      53 ..       2      37 ..       1      40 [. 0.89
   2 !   21.8   0.0   7.1e-09   9.7e-05       8      53 ..      60     108 ..      51     111 .. 0.93

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 1.5e-09
                HHHHHHHHHHHTTSEEEEEEETTEB---EEHHHHHH CS
  PF00571.23 18 lsealeilrktgvsrlpVvDedgrlvGiitlrDllk 53
                + ea++++ ++++++l V+  dg +vGi+t+rD l+
  MMETSP1325-20131115|9035_1  2 VIEAIQRMVANRIGALAVTKGDGVVVGIVTERDYLN 37
                669****************666***********876 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 7.1e-09
                 SCCEEETTSBHHHHHHHHHHHTTSEEEEEEET...TEB---EEHHHHHH CS
  PF00571.23   8 dvvtvppdetlsealeilrktgvsrlpVvDed...grlvGiitlrDllk 53 
                 ++vtv+   ++++ +e++ + +v++l+V  e     ++vG+i+ +D++k
  MMETSP1325-20131115|9035_1  60 NLVTVSLANPIDRCMEKMLAADVRHLLVRAEKpqdSEIVGMISVKDIVK 108
                 89***************************777999************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.46s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 1630.56
//
Query:       MMETSP1325-20131115|9041_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 596.54
//
Query:       MMETSP1325-20131115|9042_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 780.09
//
Query:       MMETSP1325-20131115|9043_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-05   21.5   0.0    0.00011   21.2   0.0    1.1  1  PF01062.16 Bestrophin, RFP-TM, chloride channel


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   7.7e-09   0.00011     253     289 ..      35      71 ..      29      77 .. 0.89

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 7.7e-09
  PF01062.16 253 tvlqfyffvglekvaeeLenPFGeddddlelnalcrt 289
                 ++l+ + ++g++++a  L+nPFG d+ dl+l+++ + 
  MMETSP1325-20131115|9043_1  35 STLICIAYYGVMELAAALQNPFGWDAIDLDLEQFGKR 71 
                 789****************************998655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 632.64
//
Query:       MMETSP1325-20131115|9045_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.61
# Mc/sec: 255.35
//
Query:       MMETSP1325-20131115|9046_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.68
# Mc/sec: 866.92
//
Query:       MMETSP1325-20131115|9049_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 348.94
//
Query:       MMETSP1325-20131115|9051_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-08   32.4   0.1    2.8e-08   32.2   0.0    1.0  1  PF04858.8 TH1 protein
  ------ inclusion threshold ------
      0.013   14.1   0.0      0.014   14.1   0.0    1.0  1  PF10093.4 Uncharacterized protein conserved in bacteria (DUF2331)


Domain annotation for each model (and alignments):
>> PF04858.8  TH1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   4.2e-12   2.8e-08     109     175 ..       9      81 ..       2      86 .. 0.79

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 4.2e-12
   PF04858.8 109 venkLkelvlkkfDakkaDavfteeGetPaWLdelikserwrallykL......aeknPdcLllsfaiklisd 175
                  e  L+ lv+k+fD +k D+ f      P+WL+ +++  ++r+ll +L      a ++ d+L+l+f +k i++
  MMETSP1325-20131115|9051_1   9 LEDSLELLVKKSFDQEKVDQAFNLFKGEPEWLKAMFADAKGRTLLRELyrqnkdAPQQKDSLFLKFCMKSIYN 81 
                 5788******************8777779***************86662222224445589******999987 PP

>> PF10093.4  Uncharacterized protein conserved in bacteria (DUF2331)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0     2e-06     0.014     248     315 ..      12      82 ..       2      90 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2e-06
   PF10093.4 248 vlpfvdqeeydrLLwacDlnfvRGEDSfvrAqwa...gkplvWhiYpqeddaHlkKLeafldlyaaklaee 315
                  l ++ ++++d+      +n+ +GE  +++A +a   g+ l+ + Y+q++da  +K + fl+  ++++ ++
  MMETSP1325-20131115|9051_1  12 SLELLVKKSFDQEKVDQAFNLFKGEPEWLKAMFAdakGRTLLRELYRQNKDAPQQKDSLFLKFCMKSIYNN 82 
                 567778889999999999***************976779*****************999999887766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 400.85
//
Query:       MMETSP1325-20131115|9052_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   12.2   0.2      0.053   12.1   0.1    1.1  1  PF14249.1 Tocopherol cyclase


Domain annotation for each model (and alignments):
>> PF14249.1  Tocopherol cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   3.9e-06     0.053      86     138 ..      39      92 ..      14     106 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.9e-06
   PF14249.1  86 kekllepeefeerv.eeGyqvtatlnqGiledektaetvrWeysiepvygwgdk 138
                 +++ ++ ++f+++v  +G  v + +  G  e  +  +++ W+y+++p ++wg+ 
  MMETSP1325-20131115|9052_1  39 HRHKAKQKSFRTHVpPQGAAVVPAVVGGEAEGAAWCKQAMWTYDVRPGTTWGKL 92 
                 44567788899998459***********************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 596.64
//
Query:       MMETSP1325-20131115|9053_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 295.27
//
Query:       MMETSP1325-20131115|9054_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        85  (0.00621709); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.63
# Mc/sec: 247.24
//
Query:       MMETSP1325-20131115|9055_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   15.1   0.4      0.013   14.9   0.2    1.1  1  PF04356.7 Protein of unknown function (DUF489)
      0.028   14.6   1.8      0.034   14.4   1.2    1.1  1  PF13334.1 Domain of unknown function (DUF4094)
      0.079   11.6   0.4      0.084   11.5   0.3    1.0  1  PF04078.8 Cell differentiation family, Rcd1-like
      0.098   12.5   0.1       0.14   12.0   0.1    1.3  1  PF09094.6 Domain of unknown function (DUF1925)
        0.1   11.7   0.1        0.1   11.7   0.0    1.0  1  PF06593.6 Raspberry bushy dwarf virus coat protein
       0.14   12.4   1.2       0.32   11.2   0.9    1.6  1  PF06327.9 Domain of Unknown Function (DUF1053)
       0.36   10.3   3.4       0.56    9.6   2.3    1.4  1  PF10224.4 Predicted coiled-coil protein (DUF2205)


Domain annotation for each model (and alignments):
>> PF04356.7  Protein of unknown function (DUF489)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.2   6.7e-06     0.013      66     111 ..      20      63 ..       5      70 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 6.7e-06
   PF04356.7  66 lnkkskekdaeltryalsllaLerkLsknkealaqlgerieqierq 111
                  n   k   +e  r a  +l+L+++L++++e  ++l++rie++e +
  MMETSP1325-20131115|9055_1  20 CN--AKMAGTESQRLAKQVLHLQQRLQQRDEREEMLTRRIEALEGK 63 
                 44..667788999****************************99876 PP

>> PF13334.1  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.2   1.7e-05     0.034      35      85 ..       4      60 ..       1      63 [. 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.7e-05
   PF13334.1 35 issqeaeeelqlvsedcdkkkkkesdqkdilgeVsktheaiq.......sLdktIssL 85
                +++q++++++++++e+c+ k    ++++  +++V + ++  q        L ++I +L
  MMETSP1325-20131115|9055_1  4 AQHQTHDSRVRSIQEECNAKM-AGTESQRLAKQVLHLQQRLQqrdereeMLTRRIEAL 60
                6889*************9988.88999999******9999996666655566666665 PP

>> PF04078.8  Cell differentiation family, Rcd1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   4.3e-05     0.084     176     229 ..       3      56 ..       1      64 [. 0.89

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 4.3e-05
   PF04078.8 176 icqtaerfsavaevLkkmveqlteepssRllkhvvrcYlrLsdnkrarealkkl 229
                 ++q++ + s v ++ ++  +++  ++s+Rl k+v +  +rL +  + +e+l++ 
  MMETSP1325-20131115|9055_1   3 VAQHQTHDSRVRSIQEECNAKMAGTESQRLAKQVLHLQQRLQQRDEREEMLTRR 56 
                 5677888899999999999*************************9999999865 PP

>> PF09094.6  Domain of unknown function (DUF1925)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   7.1e-05      0.14      10      53 ..      26      70 ..      18      77 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.1e-05
                -HHHHHHHHHHHHHHHHHTT-......HH.HHHHHHHTTBGGGG- CS
   PF09094.6 10 Yeesnemhkrmlevskklkslesekeaee.areelyraqcndayW 53
                 +es+++ k++l+++++l++ ++++e  +   e+l   ++  ayW
  MMETSP1325-20131115|9055_1 26 GTESQRLAKQVLHLQQRLQQRDEREEMLTrRIEALEGKKGGRAYW 70
                5799****************9555554441666677778899999 PP

>> PF06593.6  Raspberry bushy dwarf virus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.2e-05       0.1      77     128 ..      20      72 ..       4      80 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5.2e-05
   PF06593.6  77 wenqfaskpvprpakqvlkgsssksqqrdegevvftrkdsqksvr..tvsywvc 128
                  + ++a     r akqvl+    + qqrde e ++tr+      +    +ywv 
  MMETSP1325-20131115|9055_1  20 CNAKMAGTESQRLAKQVLHL-QQRLQQRDEREEMLTRRIEALEGKkgGRAYWVS 72 
                 56778888899*******86.5789***********985433222013468876 PP

>> PF06327.9  Domain of Unknown Function (DUF1053)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.9   0.00017      0.32      23      71 ..      16      64 ..       2      70 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00017
   PF06327.9 23 skelkrmglelkkskrfikkernaqekknledEvderlgqaIdarsidk 71
                 +e  + +++ ++s+r  k+  + q++ ++ dE +e+l ++I+a+  +k
  MMETSP1325-20131115|9055_1 16 IQEECNAKMAGTESQRLAKQVLHLQQRLQQRDEREEMLTRRIEALEGKK 64
                34444457888899999999999********************998776 PP

>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.3   0.00029      0.56       9      38 ..      19      49 ..      11      64 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00029
   PF10224.4  9 ele.klekeekqrlieqvleLqdsLedLseR 38
                e + k+   e qrl +qvl+Lq+ L++  eR
  MMETSP1325-20131115|9055_1 19 ECNaKMAGTESQRLAKQVLHLQQRLQQRDER 49
                33336666679**************975554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       933  (0.0682417); expected 273.4 (0.02)
Passed bias filter:                      676  (0.0494441); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 368.33
//
Query:       MMETSP1325-20131115|9056_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|9058_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-14   51.9   3.0    0.00058   18.8   0.0    3.7  3  PF00036.27 EF hand
    4.2e-12   45.9   3.9    3.8e-09   36.4   2.7    2.5  1  PF13499.1  EF-hand domain pair
    1.3e-11   43.2   7.2     0.0016   18.0   0.1    4.4  4  PF13405.1  EF-hand domain
    1.5e-11   42.9   1.7    0.00099   18.2   0.0    3.8  3  PF13202.1  EF hand
    5.9e-11   41.7   5.3    8.7e-07   28.3   1.2    3.2  3  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.049   12.9   0.0         11    5.3   0.0    3.4  3  PF09107.6  Elongation factor SelB, winged helix
      0.075   12.6   0.6        2.5    7.8   0.2    2.7  2  PF00404.13 Dockerin type I repeat


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0     1e-05      0.02       1      23 [.      30      52 ..      30      57 .. 0.85
   2 !   18.8   0.0     3e-07   0.00058       3      28 ..      98     123 ..      97     124 .. 0.91
   3 !   17.3   0.2   8.9e-07    0.0017       7      26 ..     139     158 ..     133     159 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1e-05
                HHHHHHHHHCTTTSSEBEHHHHH CS
  PF00036.27  1 elkeaFkefDkDgdGkIsfeEfk 23
                el  aF+ fD D +GkI+   ++
  MMETSP1325-20131115|9058_1 30 ELAAAFEFFDMDSSGKITMTNLR 52
                6789*************976665 PP

  == domain 2    score: 18.8 bits;  conditional E-value: 3e-07
                 HHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfkealkk 28 
                  eaFk++D D++G+++ + +++++++
  MMETSP1325-20131115|9058_1  98 AEAFKVYDPDNTGFVDHKVLRDMFQN 123
                 59********************9987 PP

  == domain 3    score: 17.3 bits;  conditional E-value: 8.9e-07
                 HHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   7 kefDkDgdGkIsfeEfkeal 26 
                 +  D+D+dGkIs+++f+++l
  MMETSP1325-20131115|9058_1 139 ETGDVDQDGKISLSDFRNML 158
                 567***************97 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   2.7     2e-12   3.8e-09       4      65 ..      99     157 ..      25     158 .. 0.96

  Alignments for each domain:
  == domain 1    score: 36.4 bits;  conditional E-value: 2e-12
   PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 eaFk +D d++g++d   L+ ++++lg     e ++e l+ ++++ D ++dG++s+++f+++
  MMETSP1325-20131115|9058_1  99 EAFKVYDPDNTGFVDHKVLRDMFQNLGF---GEVTDEDLQILVETGDVDQDGKISLSDFRNM 157
                 78*************************7...89999999999*****************987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   3.2e-05     0.062       1      24 [.      30      53 ..      30      61 .. 0.87
   2 ?    0.2   0.0      0.43   8.5e+02      16      27 ..      76      87 ..      72      90 .. 0.82
   3 !   18.0   0.1   8.3e-07    0.0016       4      31 .]      99     125 ..      97     140 .. 0.94
   4 !   12.4   0.1     5e-05     0.098      10      27 ..     142     159 ..     141     161 .. 0.94

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.2e-05
                HHH---GCC-------B---HHHH CS
   PF13405.1  1 elreaFklfDkdgdGkidaeELrd 24
                el +aF+ fD d +Gki+   Lr+
  MMETSP1325-20131115|9058_1 30 ELAAAFEFFDMDSSGKITMTNLRK 53
                5779**************999987 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.43
                -B---HHHHHHH CS
   PF13405.1 16 kidaeELrdaLr 27
                ++++++Lrd+L 
  MMETSP1325-20131115|9058_1 76 ELTLQDLRDLLL 87
                799*****9985 PP

  == domain 3    score: 18.0 bits;  conditional E-value: 8.3e-07
                 ---GCC-------B---HHHHHHH.H-- CS
   PF13405.1   4 eaFklfDkdgdGkidaeELrdaLrkslg 31 
                 eaFk +D d++G++d + Lrd+++ +lg
  MMETSP1325-20131115|9058_1  99 EAFKVYDPDNTGFVDHKVLRDMFQ-NLG 125
                 89********************99.665 PP

  == domain 4    score: 12.4 bits;  conditional E-value: 5e-05
                 -------B---HHHHHHH CS
   PF13405.1  10 DkdgdGkidaeELrdaLr 27 
                 D d+dGki+++++r++L 
  MMETSP1325-20131115|9058_1 142 DVDQDGKISLSDFRNMLD 159
                 99*************996 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   5.1e-07   0.00099       2      24 ..      32      55 ..      31      56 .. 0.86
   2 !    7.2   0.0    0.0015         3       4      18 ..     100     114 ..      97     115 .. 0.87
   3 !   14.2   0.2   9.1e-06     0.018       9      24 ..     142     157 ..     141     158 .. 0.92

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 5.1e-07
                HHHHHHH--S----B-HHHHHH.H CS
   PF13202.1  2 kdtFrafDlNgDGkIsreELkr.l 24
                 ++F+ fD++ +GkI++  L++ l
  MMETSP1325-20131115|9058_1 32 AAAFEFFDMDSSGKITMTNLRKrL 55
                578**************9998645 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0015
                 HHHHH--S----B-H CS
   PF13202.1   4 tFrafDlNgDGkIsr 18 
                 +F+++D ++ G++++
  MMETSP1325-20131115|9058_1 100 AFKVYDPDNTGFVDH 114
                 6************97 PP

  == domain 3    score: 14.2 bits;  conditional E-value: 9.1e-06
                 --S----B-HHHHHHH CS
   PF13202.1   9 DlNgDGkIsreELkrl 24 
                 D++ DGkIs ++++++
  MMETSP1325-20131115|9058_1 142 DVDQDGKISLSDFRNM 157
                 9************986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   3.5e-05     0.069      19      43 ..      24      47 ..      13      49 .. 0.87
   2 ?    1.1   0.0      0.14   2.7e+02       5      42 ..      77     112 ..      74     115 .. 0.68
   3 !   28.3   1.2   4.4e-10   8.7e-07       2      51 ..     109     158 ..     108     159 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 3.5e-05
   PF13833.1 19 lkglseeevdilfrefDtdgdGkis 43
                +  ++eee+ + f  fD+d +Gki+
  MMETSP1325-20131115|9058_1 24 VL-VTEEELAAAFEFFDMDSSGKIT 47
                33.9*******************96 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.14
   PF13833.1   5 ItreeLkral.allglkg..lseeevdilfrefDtdgdGki 42 
                 +t ++L++ l +        ++ + v + f++ D d+ G +
  MMETSP1325-20131115|9058_1  77 LTLQDLRDLLlD-----NevVNFDPVAEAFKVYDPDNTGFV 112
                 688888885522.....133666778888888888888865 PP

  == domain 3    score: 28.3 bits;  conditional E-value: 4.4e-10
   PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvll 51 
                 +G ++ + L+++ ++lg +++++e+++il+  +D d+dGkis+ +F ++l
  MMETSP1325-20131115|9058_1 109 TGFVDHKVLRDMFQNLGFGEVTDEDLQILVETGDVDQDGKISLSDFRNML 158
                 56677777888558899999**************************9997 PP

>> PF09107.6  Elongation factor SelB, winged helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.19   3.6e+02       7      20 ..      42      55 ..      34      57 .. 0.77
   2 ?    2.3   0.0     0.049        95       4      20 ..      70      86 ..      67      87 .. 0.84
   3 ?    5.3   0.0    0.0058        11       6      21 ..     144     159 ..     142     160 .. 0.88

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.19
   PF09107.6  7 engeitvaefRdal 20
                ++g+it+ ++R +l
  MMETSP1325-20131115|9058_1 42 SSGKITMTNLRKRL 55
                48999999999887 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.049
   PF09107.6  4 llaengeitvaefRdal 20
                l++ ++e+t++++Rd+l
  MMETSP1325-20131115|9058_1 70 LMNNKPELTLQDLRDLL 86
                556789*********97 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.0058
   PF09107.6   6 aengeitvaefRdalg 21 
                 +++g+i++++fR++l 
  MMETSP1325-20131115|9058_1 144 DQDGKISLSDFRNMLD 159
                 579**********986 PP

>> PF00404.13  Dockerin type I repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.07   1.4e+02       1      11 [.      39      49 ..      39      49 .. 0.93
   2 ?    7.8   0.2    0.0013       2.5       1      13 [.     142     154 ..     142     160 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.07
                -TT-SS--SHH CS
  PF00404.13  1 DVNgDGkVnal 11
                D++  Gk++++
  MMETSP1325-20131115|9058_1 39 DMDSSGKITMT 49
                99*******97 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0013
                 -TT-SS--SHHHH CS
  PF00404.13   1 DVNgDGkVnalDl 13 
                 DV++DGk++  D+
  MMETSP1325-20131115|9058_1 142 DVDQDGKISLSDF 154
                 9*******98887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       812  (0.0593915); expected 273.4 (0.02)
Passed bias filter:                      627  (0.0458602); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|9060_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00016   21.2   0.1    0.00026   20.5   0.0    1.3  1  PF04940.7 Sensors of blue-light using FAD


Domain annotation for each model (and alignments):
>> PF04940.7  Sensors of blue-light using FAD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   1.9e-08   0.00026       1      90 [.      35     126 ..      35     129 .. 0.78

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 1.9e-08
                 EEEEEEEEEE-TTS-.HHHHHHHHHHHHHHHHHHT-E-EEEE----EEEEEE--HHHHHHHHHHHTT-TT..EEEEEE.EEEEEESS-SS-S-S CS
   PF04940.7   1 lvrlvYvSkakeels.eeelesileqarrnNakagitGvLlydggrflqvLEGpeeaveelyerIsqDpR..hkdvtv.lleepieerrFkews 90 
                 l++++Yv+k++++    e  ++++++   + +++++tG+Ll+++g  ++++E ++ + ++ +++     R   +dv+v l+ e +++r+F++w+
  MMETSP1325-20131115|9060_1  35 LTHILYVAKTQDKDAaLEFHREVMANL--QKQESSVTGILLVQDGALVHYMEASNFHTNAFLRHLNTQGRglLTDVRVmLSSEDCDRRHFPKWT 126
                 678999999855544044444555444..457899***********************************554677651677889********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1075.92
//
Query:       MMETSP1325-20131115|9062_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-07   31.3   0.1    1.7e-07   30.8   0.1    1.2  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.1   1.2e-11   1.7e-07       2      39 ..      40      77 ..      39      85 .. 0.88

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 1.2e-11
                EEE----EEE-TT-B--EEEEEEE-EEEEEEE-----E CS
  PF00027.24  2 rsfkkgevifkeGdpadslyiilsGkvkvykndedgke 39
                +++k+g+ i+keGd +d ++i+++G+v  +kn  + ++
  MMETSP1325-20131115|9062_1 40 KTYKAGDNIIKEGDDGDDFFIVEEGEVVCTKNKAGVEV 77
                89*************************99999888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 368.01
//
Query:       MMETSP1325-20131115|9057_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 564.86
//
Query:       MMETSP1325-20131115|9063_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 235.11
//
Query:       MMETSP1325-20131115|9064_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 728.89
//
Query:       MMETSP1325-20131115|9066_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-05   22.8   0.0    6.5e-05   22.3   0.0    1.3  1  PF00887.14 Acyl CoA binding protein


Domain annotation for each model (and alignments):
>> PF00887.14  Acyl CoA binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   4.7e-09   6.5e-05       2      50 ..      48      95 ..      47      97 .] 0.86

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 4.7e-09
                SSTHHHHHHHHHH---S.---TTTTTHHHHHHHHTT------------- CS
  PF00887.14  2 eekFeaavktvkklpkkarpsneekleLYglyKqateGdvnskrPglfd 50
                e +Fe a k v + +  ++p + ++l++ +lyKq+  Gd+++ rPg +d
  MMETSP1325-20131115|9066_1 48 ETEFEWAQKRVFEPSF-PKPAKIDLLRIHSLYKQSHYGDCTQRRPGPLD 95
                6778888888877666.89**************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 464.89
//
Query:       MMETSP1325-20131115|9067_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|9061_1  [L=595]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0045   15.3   3.9          6    5.0   5.4    2.1  2  PF13347.1  MFS/sugar transport protein
  ------ inclusion threshold ------
      0.058   11.8   1.1        3.1    6.1   0.0    2.4  2  PF09972.4  Predicted membrane protein (DUF2207)
       0.35   10.7   4.6        0.7    9.7   3.2    1.4  1  PF00053.19 Laminin EGF-like (Domains III and V)
        1.5    8.8  12.7         10    6.1   5.9    3.5  3  PF13664.1  Domain of unknown function (DUF4149)


Domain annotation for each model (and alignments):
>> PF13347.1  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0023       7.8     173     206 ..     191     281 ..      92     308 .. 0.67
   2 !    5.0   5.4    0.0018         6      98     214 ..     319     435 ..     302     447 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0023
   PF13347.1 173 s......................................................gyrlaavvigilal.lsflitfigtke......rraapek 206
                 +                                                      gy++++v+i ++++ l+ +it +  +e      r    e+
  MMETSP1325-20131115|9061_1 191 NvlsawlsalllilpviarricssfrcnrydngnyeylaadasidcsspeydvmvGYAIVMVLIYVIGCpLMLFITLFRLREylnpagR----EE 281
                 05555555555555555555555555556666777788888888888888888899999888777776626888999999998643331....22 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0018
   PF13347.1  98 satakllya..fitylll.vlaytvvnipysslggvltddskeRtslssyrliasflggllvavitlplv..aalgggetsgyrlaavvigilallsflitfigtkerraapekkekklplk 214
                 ++t  ll +  +++y+ l + ++ vv ++  +l+++ ++ +   ts+s    +  ++++ +v +i+++l+  a + +   s++ ++ vv++++ l ++++ f+  + rr+ +e ++ k+++ 
  MMETSP1325-20131115|9061_1 319 NMTRRLLLTcvTLLYTSLaGATVWVVCVSLITLVIEQSSSPYINTSVS---ALSVVCAWQIVLFILFQLLldAEMTS--GSQATIFSVVLMLSNLTLMIFIFYDRERRRRMEEMRKSKTKMN 435
                 344444444115555555555555555566666666666665555555...55666777889999999994544444..4578888888888887777777777777777777777766653 PP

>> PF09972.4  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0   0.00091       3.1     400     462 ..     194     281 ..     174     285 .. 0.83
   2 ?    3.2   0.7    0.0069        23     405     452 ..     341     386 ..     317     444 .. 0.52

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00091
   PF09972.4 400 llilgilllilsfili........................ifllalfaglllaalvllvivlvigliiallllrkllga.wtpeGaee 462
                   +l++lllil +i+                         i ++++++ + + +++++v+++vig+ ++l+++ ++l+   +p+G+ee
  MMETSP1325-20131115|9061_1 194 SAWLSALLLILPVIARricssfrcnrydngnyeylaadasIDCSSPEYDVMVGYAIVMVLIYVIGCPLMLFITLFRLREyLNPAGREE 281
                 456677777777777788899999999999999999999999999999************************8888888799999987 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.0069
   PF09972.4 405 illlilsfiliifllalfaglllaalvllvivlvigliiallllrkll 452
                 ++++ +s+i + ++    ++ +++++  l++v++ ++++++l++  ll
  MMETSP1325-20131115|9061_1 341 VWVVCVSLITL-VIEQSSSPYINTSVSALSVVCAWQIVLFILFQ-LLL 386
                 44444444444.34444444444444444444444444444432.111 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.2   0.00021       0.7      16      49 .]      14      44 ..       3      47 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00021
                ----BSBSTTEE---S-EE----B-TTTTGGGSS CS
  PF00053.19 16 stgqClCkenveGrkCdrCkpgyyglpsdsgegC 49
                st q lC+++ +G+ C+ C++ +++++   + gC
  MMETSP1325-20131115|9061_1 14 STAQDLCRKGSSGPLCELCEQDFFMNDL--H-GC 44
                566667******************9843..3.44 PP

>> PF13664.1  Domain of unknown function (DUF4149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.055   1.9e+02      68     100 ..      53      85 ..      42      86 .. 0.79
   2 ?   -1.5   0.1      0.71   2.4e+03      60      80 ..     183     204 ..     131     211 .. 0.64
   3 ?    6.1   5.9     0.003        10       1      61 [.     331     425 ..     331     438 .. 0.81

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.055
   PF13664.1  68 llqlllllvvlllsllnlfylepkitslkeqre 100
                  ++  lllvv+l ++l ++y+    ++++++r+
  MMETSP1325-20131115|9061_1  53 GWLGPLLLVVALGAVLLAVYFNREKAEAMYKRN 85 
                 566678888888889999999888888888886 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.71
   PF13664.1  60 k.eklaseellqlllllvvlll 80 
                 +   +++ + l+++l++++l+l
  MMETSP1325-20131115|9061_1 183 RgPGSNKTNVLSAWLSALLLIL 204
                 3444555556666666666665 PP

  == domain 3    score: 6.1 bits;  conditional E-value: 0.003
   PF13664.1   1 lslglllGallwvtfvv..............................apvlfrs.LprhqagelqsklFpvyfglglalsvlllltevank...e 61 
                 l++++l Ga++wv+ v+                                +lf+  L+ ++++  q+ +F+v+  l+ + +++++++   ++   e
  MMETSP1325-20131115|9061_1 331 LLYTSLAGATVWVVCVSlitlvieqssspyintsvsalsvvcawqivLFILFQLlLDAEMTSGSQATIFSVVLMLSNLTLMIFIFYDRERRrrmE 425
                 6899*************999999999999999999999999999555555555555999999999999999999999999999999887765442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       836  (0.0611469); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.11u 0.37s 00:00:01.48 Elapsed: 00:00:00.63
# Mc/sec: 2263.23
//
Query:       MMETSP1325-20131115|9065_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 1370.09
//
Query:       MMETSP1325-20131115|9068_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   12.0   0.0      0.095   11.7   0.0    1.1  1  PF09258.5 Glycosyl transferase family 64 domain


Domain annotation for each model (and alignments):
>> PF09258.5  Glycosyl transferase family 64 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     7e-06     0.095     197     230 ..      35      66 ..      19      78 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 7e-06
   PF09258.5 197 keaklseakkvglsskkeHlkkrskCinkfskvf 230
                     + +++  gl +k++Hl  r++C+n+++++f
  MMETSP1325-20131115|9068_1  35 G--DFGKMGGNGLHQKTSHLMTRTECLNQMNRAF 66 
                 4..44566789*******************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 667.22
//
Query:       MMETSP1325-20131115|9070_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 266.76
//
Query:       MMETSP1325-20131115|9072_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 283.21
//
Query:       MMETSP1325-20131115|9069_1  [L=332]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.38s 00:00:01.02 Elapsed: 00:00:00.50
# Mc/sec: 1591.18
//
Query:       MMETSP1325-20131115|9074_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-08   32.3   0.0    5.6e-08   32.1   0.0    1.1  1  PF00069.20 Protein kinase domain
    0.00076   18.5   0.0    0.00084   18.4   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
       0.05   13.4   0.0      0.065   13.0   0.0    1.4  1  PF03109.11 ABC1 family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   1.2e-11   5.6e-08       3     107 ..       8     107 ..       6     108 .] 0.90

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 1.2e-11
                 EEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHH..HHCCB-HHHHHHHHHHH CS
  PF00069.20   3 lleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllk..kegklseeeikkialqi 107
                 ++++l + s G+V++a+  + ++ vAvK+++ +++ + ++ +        ++l Hpni +++e+ ++++ +yl +e++ + dl + +k  + ++l+e+e+  ++ q+
  MMETSP1325-20131115|9074_1   8 FKRRLARSSEGEVWSATTLDGRD-VAVKVVDIKQSTHYAALQ-----PKWTNLAHPNIATVIEYATDNRFCYLTTELYGC-DLTEKIKsaHAERLREDEAAAYFVQV 107
                 5788899999*********9996.*******99999877644.....5678999************************99.9999999888999**********998 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.8e-07   0.00084       3     112 ..       8     107 ..       6     108 .] 0.82

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.8e-07
                 EEEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHH CS
  PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqi 112
                 ++++l + + G+V+++t       +  +VavK+++ +++ ++ ++++      ++l hpni +++ + t+++ +++ te+  g dL e +++ + e+l+ ++   + +q+
  MMETSP1325-20131115|9074_1   8 FKRRLARSSEGEVWSATTL-----DGRDVAVKVVDIKQS-THYAALQP---KWTNLAHPNIATVIEYATDNRFCYLTTELY-GCDLTEKIKSAHAERLREDEAAAYFVQV 107
                 7889999999******999.....899*******44333.33455554...457899************988888888886.569******9999999999999988887 PP

>> PF03109.11  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.4e-05     0.065      19      43 ..      12      36 ..       7      99 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.4e-05
  PF03109.11 19 lAaASiaQVHrAvlksgeeVavKvq 43
                lA  S + V+ A++ +g++VavKv 
  MMETSP1325-20131115|9074_1 12 LARSSEGEVWSATTLDGRDVAVKVV 36
                7888999****************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 497.70
//
Query:       MMETSP1325-20131115|9076_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|9078_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   12.7   4.1       0.25   10.6   1.0    2.0  2  PF13491.1 Domain of unknown function (DUF4117)


Domain annotation for each model (and alignments):
>> PF13491.1  Domain of unknown function (DUF4117)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.0   1.9e-05      0.25      59     139 ..       3      87 ..       1     115 [. 0.78
   2 ?    3.0   0.0     0.004        54       8      38 ..     118     148 ..     111     154 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 1.9e-05
   PF13491.1  59 fslfGlsawllvllllvwg...lrllrrrseerallrllgllllllasaalaalrlasl.eatlpfgaGGllGrllagalltllg 139
                 f+++Gls  l v+ ++v+    l ++   + ++++   +++++  +a+++l  +  + + + ++p +++G +G++  +++ + l 
  MMETSP1325-20131115|9078_1   3 FFALGLSTALAVVGAVVMQrtaLDMFPLDEFKSRVCPRCYAAAHSVALSTLSPFVAYVWtGTAVPESLAGGVGSISESFVAWCLH 87 
                 789999999888877765522366666688889999999************9998888867899**********99999988874 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.004
   PF13491.1   8 lglallalalflllaLlsYspdDpswstsgs 38 
                 ++ a++++++ l +  ++ ++dD++w+ +++
  MMETSP1325-20131115|9078_1 118 VFTAFIVVTVTLYMTKFTTNNDDAAWDDAYT 148
                 56789999999999999999******88765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       507  (0.0370831); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 973.21
//
Query:       MMETSP1325-20131115|9079_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 723.80
//
Query:       MMETSP1325-20131115|9080_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|9082_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0002   21.1   0.3    0.00065   19.4   0.1    1.9  2  PF08029.6  HisG, C-terminal domain
     0.0069   15.7   0.2      0.056   12.7   0.0    2.1  2  PF01965.19 DJ-1/PfpI family
  ------ inclusion threshold ------
      0.049   13.5   0.0      0.095   12.5   0.0    1.5  1  PF00512.20 His Kinase A (phospho-acceptor) domain


Domain annotation for each model (and alignments):
>> PF08029.6  HisG, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.3   1.3e+03       8      33 ..       6      31 ..       2      65 .. 0.73
   2 !   19.4   0.1   1.4e-07   0.00065      14      73 ..      80     137 ..      75     139 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.3
                EEEEE-GGGHHHHHHH-------EEE CS
   PF08029.6  8 vmynaprekleevlallPGleaPTis 33
                v+ ++ + k++e+ +l+ G + P   
  MMETSP1325-20131115|9082_1  6 VQGDVFGVKVAEAGKLTTGQNPPSAK 31
                56677778888888888888777654 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 1.4e-07
                 GGGHHHHHHH-------EEEE-S----EEEEEEE-CCCHHHHHHHHHC---EEEEEEE-S CS
   PF08029.6  14 rekleevlallPGleaPTispLsdeewvavsavvpekevaevmdeLkalGAsgIlvlpie 73 
                 + klee+ + l+   ++ ++p ++++wv v+a v+++ v  v  +L++ GA+ + v +i 
  MMETSP1325-20131115|9082_1  80 KAKLEELEKALS--LGDSLAPEEKSDWVIVRALVKKDMVDAVTGDLESKGAKEVSVAEIP 137
                 678999999999..99999999********************************999996 PP

>> PF01965.19  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   1.2e-05     0.056     120     146 ..      14      41 ..       4      42 .. 0.80
   2 ?    0.9   0.0     0.054   2.5e+02      58      79 ..      45      67 ..      40      78 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.2e-05
                 EEETT..EEEESSGGGHHHHHHHHHHHH CS
  PF01965.19 120 vvdgn.klvTsanpgsaeefakelleal 146
                 +v++  kl+T++np sa+++a++++ al
  MMETSP1325-20131115|9082_1  14 KVAEAgKLTTGQNPPSAKPTAEAIIGAL 41 
                 3344459******************988 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.054
                HHHHHHHHHHHH----EE.EE-- CS
  PF01965.19 58 eklvelvkefaaagkpia.aiCh 79
                 +++ lv +f a +kp+a aiC+
  MMETSP1325-20131115|9082_1 45 NDAESLVDDFLALAKPTAeAICQ 67
                6789999**********988885 PP

>> PF00512.20  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.1e-05     0.095      31      67 ..      19      62 ..      12      63 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.1e-05
  PF00512.20 31 gelteee.......lrealeiirdeaerlraliedlLdlsriea 67
                g+lt+ +        +ea+ +++++a+++++l++d+L l++ +a
  MMETSP1325-20131115|9082_1 19 GKLTTGQnppsakpTAEAIIGALEAANDAESLVDDFLALAKPTA 62
                555555555556667999**********************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       652  (0.0476887); expected 273.4 (0.02)
Passed bias filter:                      586  (0.0428613); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 802.05
//
Query:       MMETSP1325-20131115|9083_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|9085_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|9077_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-12   47.6   0.1    2.1e-12   46.8   0.1    1.3  1  PF13499.1  EF-hand domain pair
    7.4e-11   40.4   0.1    7.9e-06   24.7   0.0    2.4  2  PF00036.27 EF hand
    7.3e-09   34.6   0.1    1.2e-05   24.6   0.0    2.5  2  PF13405.1  EF-hand domain
    3.9e-08   32.6   2.0      3e-06   26.6   0.3    2.6  2  PF13833.1  EF-hand domain pair
    4.6e-07   29.4   0.4     0.0025   17.4   0.1    2.2  2  PF12763.2  Cytoskeletal-regulatory complex EF hand
    5.3e-07   28.5   0.6    1.1e-05   24.4   0.1    2.5  2  PF13202.1  EF hand
  ------ inclusion threshold ------
      0.012   15.4   0.0      0.035   14.0   0.0    1.7  1  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
      0.037   13.6   0.6      0.075   12.6   0.3    1.5  2  PF05099.8  Tellurite resistance protein TerB
      0.066   13.2   0.1       0.16   12.0   0.1    1.8  1  PF07499.8  RuvA, C-terminal domain
      0.097   12.2   0.1       0.38   10.3   0.0    1.9  2  PF09119.5  SicP binding


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.1   1.5e-15   2.1e-12       2      65 ..      93     153 ..      92     154 .. 0.95

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 1.5e-15
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 lk++F++ D dg+g+ldkee +++l +lg    ++ ++ +++ i+ ++D + ++v++feEf++a
  MMETSP1325-20131115|9077_1  93 LKKLFEAADADGNGTLDKEEVRAALLALGF---NHLKDSQIEGIVSRADVDENEVIDFEEFVKA 153
                 8999*************************7...899999**********************998 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   5.8e-09   7.9e-06       2      26 ..      93     117 ..      92     120 .. 0.92
   2 !   13.5   0.0   2.1e-05     0.029       5      25 ..     133     153 ..     129     155 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 5.8e-09
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                 lk++F+ +D Dg+G++++eE ++al
  MMETSP1325-20131115|9077_1  93 LKKLFEAADADGNGTLDKEEVRAAL 117
                 89********************998 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 2.1e-05
                 HHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfkea 25 
                 + + +D+D +  I+feEf++a
  MMETSP1325-20131115|9077_1 133 IVSRADVDENEVIDFEEFVKA 153
                 66789*************986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0     9e-09   1.2e-05       2      31 .]      93     121 ..      92     121 .. 0.92
   2 !    7.5   0.0    0.0028       3.8      10      25 ..     138     153 ..     133     160 .. 0.91

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 9e-09
                 HH---GCC-------B---HHHHHHH.H-- CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrkslg 31 
                 l+++F++ D dg+G++d+eE+r+aL  +lg
  MMETSP1325-20131115|9077_1  93 LKKLFEAADADGNGTLDKEEVRAALL-ALG 121
                 799*********************98.666 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0028
                 -------B---HHHHH CS
   PF13405.1  10 DkdgdGkidaeELrda 25 
                 D d +  id+eE+++a
  MMETSP1325-20131115|9077_1 138 DVDENEVIDFEEFVKA 153
                 99***********986 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   6.8e-05     0.094      30      51 ..      96     117 ..      93     120 .. 0.88
   2 !   26.6   0.3   2.2e-09     3e-06       2      49 ..     105     152 ..     104     154 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6.8e-05
   PF13833.1  30 lfrefDtdgdGkisfeEFcvll 51 
                 lf ++D+dg+G +++eE  ++l
  MMETSP1325-20131115|9077_1  96 LFEAADADGNGTLDKEEVRAAL 117
                 899**************87766 PP

  == domain 2    score: 26.6 bits;  conditional E-value: 2.2e-09
   PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcv 49 
                 +G +++ee + al +lg ++l++++++ +++ +D d +  i+feEF++
  MMETSP1325-20131115|9077_1 105 NGTLDKEEVRAALLALGFNHLKDSQIEGIVSRADVDENEVIDFEEFVK 152
                 899**********7779*****************************97 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00017      0.23      36      67 ..      84     115 ..      62     126 .. 0.84
   2 !   17.4   0.1   1.8e-06    0.0025      38      68 ..     123     153 ..     113     168 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00017
   PF12763.2  36 knskleedklekiwdladidedgkldfeefci 67 
                 ++sk+ +  l+k+++ ad d +g+ld ee   
  MMETSP1325-20131115|9077_1  84 HESKFGQIALKKLFEAADADGNGTLDKEEVRA 115
                 67999999********************9755 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 1.8e-06
   PF12763.2  38 skleedklekiwdladidedgkldfeefcia 68 
                  +l+++++e i + ad+de++ +dfeef+ a
  MMETSP1325-20131115|9077_1 123 NHLKDSQIEGIVSRADVDENEVIDFEEFVKA 153
                 689*************************865 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.1   7.9e-09   1.1e-05       1      23 [.      93     115 ..      93     118 .. 0.90
   2 ?    2.1   0.0     0.088   1.2e+02      16      22 ..     145     151 ..     135     154 .. 0.85

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 7.9e-09
                 HHHHHHHH--S----B-HHHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELkr 23 
                 lk++F+a+D++g G++++eE ++
  MMETSP1325-20131115|9077_1  93 LKKLFEAADADGNGTLDKEEVRA 115
                 799*****************877 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.088
                 B-HHHHH CS
   PF13202.1  16 IsreELk 22 
                 I++eE+ 
  MMETSP1325-20131115|9077_1 145 IDFEEFV 151
                 9****95 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.5e-05     0.035      35     112 ..      72     152 ..      53     153 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.5e-05
   PF10591.4  35 ehseelekeaekknskeckeaveWkFnqlDtnkdkvlsksElaplrapl...vklehCikeffksCDadkdkkisleEWck 112
                 eh++  +k  ++++sk  + a++  F+  D + ++ l+k+E+++    l      ++ i+  ++++D+d+++ i++eE+ k
  MMETSP1325-20131115|9077_1  72 EHTKVISKFVDTHESKFGQIALKKLFEAADADGNGTLDKEEVRAALLALgfnHLKDSQIEGIVSRADVDENEVIDFEEFVK 152
                 5666677777888888888889999*****************99888886655567889*******************987 PP

>> PF05099.8  Tellurite resistance protein TerB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.065        89      81     117 ..      74     112 ..      49     114 .. 0.63
   2 ?   12.6   0.3   5.5e-05     0.075      29      90 ..      95     157 ..      77     166 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.065
   PF05099.8  81 eeftralkdafdyeerlallealwevAlADG..eldeeE 117
                  ++++++ d+ + +  +  l+ l+e A ADG   ld+eE
  MMETSP1325-20131115|9077_1  74 TKVISKFVDTHESKFGQIALKKLFEAADADGngTLDKEE 112
                 444444445444555566788899999999855666666 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 5.5e-05
   PF05099.8  29 LlaevakaDg..qvteeEiqairellrsrygldpeeakalielfeeaeeeaadleeftralkda 90 
                  l+e a aDg  + ++eE++a    l    +l++ + + ++  ++  e e++d+eef++a  ++
  MMETSP1325-20131115|9077_1  95 KLFEAADADGngTLDKEEVRAALLAL-GFNHLKDSQIEGIVSRADVDENEVIDFEEFVKATPAT 157
                 47899999973368899999999999.999****************************987665 PP

>> PF07499.8  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   0.00012      0.16       3      16 ..     110     123 ..     109     153 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00012
   PF07499.8   3 ledaveALlaLGYk 16 
                  e++ +ALlaLG++
  MMETSP1325-20131115|9077_1 110 KEEVRAALLALGFN 123
                 59***********5 PP

>> PF09119.5  SicP binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00028      0.38      31      76 ..      68     113 ..      51     118 .. 0.88
   2 ?   -1.0   0.0      0.97   1.3e+03      57      78 ..     142     164 ..     139     167 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00028
                 CS--S-HHHHHHHHHHHHHT---HHHHHHHHHHHH-----GGGS-E CS
   PF09119.5  31 qvrvenkkvLevFllALakryGeeaakdaldasalrdnkPLtqRlv 76 
                 +v  e  kv+  F+     ++G+ a k  ++a++  +n  L++  v
  MMETSP1325-20131115|9077_1  68 KVIAEHTKVISKFVDTHESKFGQIALKKLFEAADADGNGTLDKEEV 113
                 5667899******************************999998665 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.97
                 HHHHHHHHH-----GGGS-E.EE CS
   PF09119.5  57 kdaldasalrdnkPLtqRlv.vq 78 
                 ++++d  +  + +P t+R+  v+
  MMETSP1325-20131115|9077_1 142 NEVIDFEEFVKATPATLRTNlVK 164
                 56788888999999999985455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 865.62
//
Query:       MMETSP1325-20131115|9084_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.83    9.4   2.6        1.1    9.0   1.8    1.2  1  PF06679.7 Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.8     8e-05       1.1      33      77 ..      24      68 ..      13      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 8e-05
   PF06679.7 33 aesaassePeprtlsalpPgptpanptalleadakkGkasetssg 77
                ++sa++s+P p  l++ pP+ +p+ p a+l+  ++  +  +t  g
  MMETSP1325-20131115|9084_1 24 VTSAVDSSPLPLDLPTNPPAVSPGLPSAALSQPSRTAERPSTGRG 68
                578999*********************999987777666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 693.95
//
Query:       MMETSP1325-20131115|9087_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 570.33
//
Query:       MMETSP1325-20131115|9081_1  [L=422]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-35  119.5   0.0    1.2e-34  118.3   0.0    1.7  1  PF02785.14 Biotin carboxylase C-terminal domain
    1.3e-15   56.6   2.3    1.3e-15   56.6   1.6    2.2  2  PF00364.17 Biotin-requiring enzyme
    4.3e-12   45.6   0.0    7.4e-12   44.8   0.0    1.4  1  PF02786.12 Carbamoyl-phosphate synthase L chain, ATP binding domain
    2.2e-06   27.1   1.5      1e-05   24.9   0.2    2.4  2  PF13533.1  Biotin-lipoyl like
     0.0036   16.4   0.1     0.0066   15.5   0.1    1.3  1  PF05896.6  Na(+)-translocating NADH-quinone reductase subunit A (NQRA)
     0.0054   15.9   0.7     0.0088   15.2   0.1    1.6  2  PF00529.15 HlyD family secretion protein
  ------ inclusion threshold ------
       0.11   12.2   0.5       0.23   11.2   0.4    1.5  1  PF11614.3  Ubp3 associated protein Bre5


Domain annotation for each model (and alignments):
>> PF02785.14  Biotin carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.3   0.0   6.3e-38   1.2e-34       1     107 []      56     167 ..      56     167 .. 0.99

  Alignments for each domain:
  == domain 1    score: 118.3 bits;  conditional E-value: 6.3e-38
                 EEEEESEETTTTTEE--SB--SEE--.....-----EEEE------B--SSS--EEEEEEEE-SSHHHHHHHHHHHHHT-EE-----SHHHHHHHHH-HHHH-----TTTTT CS
  PF02785.14   1 eaRiyaEdpakdflPstGkvtelelp.....egpgvrvdsaveegsevspyyDsmiaKlivhgpdreeAlkrlrraLaelrieGvktniaflrailadeeflagevdtafle 107
                 eaR+yaE+p ++flP+tG++++l+ p     ++  vrvd++v+eg++v+++yD+mi+Klivh++dr++Al+ l+ aL++++++Gv+tn++fl+++ ++++f++g ++t+fl+
  MMETSP1325-20131115|9081_1  56 EARVYAENPGTGFLPATGNLRKLREPpadafGESTVRVDTGVTEGDNVTMFYDPMISKLIVHSKDRATALRDLNLALRSYQVAGVPTNLSFLERCASHPAFVEGGISTSFLD 167
                 89***********************99999999*****************************************************************************96 PP

>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       3.3   6.5e+03      55      65 ..     231     243 ..     226     249 .. 0.46
   2 !   56.6   1.6   6.9e-19   1.3e-15       3      74 .]     347     412 ..     344     412 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 3.3
                 EEESS-..TT-EE CS
  PF00364.17  55 keilvk..eGdtv 65 
                 + i+v+  eG+t+
  MMETSP1325-20131115|9081_1 231 ETIAVEsdEGSTI 243
                 5554441144443 PP

  == domain 2    score: 56.6 bits;  conditional E-value: 6.9e-19
                 ES-S----EEEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEESS-TT-EE----ECEEE CS
  PF00364.17   3 iksPmiGesvkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllaki 74 
                 ik+ m+G++v+      vlv vGd+V+agq+l+++eamKme+ i+a   G+v+++   eG+ v  g +l+++
  MMETSP1325-20131115|9081_1 347 IKAVMPGKVVR------VLVDVGDEVEAGQPLVILEAMKMEHVITANGPGCVSAVSFGEGEIVGDGAILVEL 412
                 56667777777......****************************************************975 PP

>> PF02786.12  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   3.8e-15   7.4e-12     172     210 ..       2      40 ..       1      41 [. 0.94

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 3.8e-15
                 EEEEEESS--TTHHHHHHH----HHHHHHHHH----CCC CS
  PF02786.12 172 yviEvNtRlsvesalaekaTGldlvkeaakialgekLee 210
                 ++ E+NtRl+ve++++e++TGldlv++++++a+g  L++
  MMETSP1325-20131115|9081_1   2 FFCEMNTRLQVEHPVTEMITGLDLVEWQLHVAAGGALPI 40 
                 689*******************************99975 PP

>> PF13533.1  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.2   5.2e-09     1e-05       5      40 ..     347     382 ..     346     387 .. 0.87
   2 ?    0.6   0.0      0.21     4e+02       5      34 ..     384     413 ..     381     414 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 5.2e-09
   PF13533.1   5 IappvsGrVeevlVkeGqeVkkGDvLleldseklea 40 
                 I++  +G+V++vlV  G+eV++G++L++l+  k e+
  MMETSP1325-20131115|9081_1 347 IKAVMPGKVVRVLVDVGDEVEAGQPLVILEAMKMEH 382
                 56667************************9887775 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.21
   PF13533.1   5 IappvsGrVeevlVkeGqeVkkGDvLleld 34 
                 I++  +G V +v   eG  V  G +L+el+
  MMETSP1325-20131115|9081_1 384 ITANGPGCVSAVSFGEGEIVGDGAILVELE 413
                 67777999******************9995 PP

>> PF05896.6  Na(+)-translocating NADH-quinone reductase subunit A (NQRA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   3.4e-06    0.0066      16      84 ..     331     400 ..     329     415 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 3.4e-06
   PF05896.6  16 peqeiedakavksvallgedyvglkpkllvkegdkvkkGqvlfedK.ktpgvkftapasGevkeinrGek 84 
                 p+ +++ a++++s  l+ +   g   ++lv +gd+v++Gq+l+     + + ++ta + G v++++ Ge 
  MMETSP1325-20131115|9081_1 331 PKATFQGASDSSSAPLIKAVMPGKVVRVLVDVGDEVEAGQPLVILEaMKMEHVITANGPGCVSAVSFGEG 400
                 5666666777777777777777888899************99765415567889*************985 PP

>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   4.5e-06    0.0088      10      34 ..     352     376 ..     347     381 .. 0.88
   2 ?   -3.5   0.0       2.2   4.3e+03      11      34 ..     390     413 ..     384     414 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 4.5e-06
                 ---EEEE-S----------EEEEE- CS
  PF00529.15  10 sGivievlvkeGdrVkaGdvLvrlD 34 
                  G v++vlv+ Gd V+aG++Lv l+
  MMETSP1325-20131115|9081_1 352 PGKVVRVLVDVGDEVEAGQPLVILE 376
                 699******************9776 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 2.2
                 --EEEE-S----------EEEEE- CS
  PF00529.15  11 GivievlvkeGdrVkaGdvLvrlD 34 
                 G v  v + eG+ V  G +Lv+l+
  MMETSP1325-20131115|9081_1 390 GCVSAVSFGEGEIVGDGAILVELE 413
                 78999999*************997 PP

>> PF11614.3  Ubp3 associated protein Bre5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   0.00012      0.23      60     110 ..     231     286 ..     222     309 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00012
   PF11614.3  60 egleiv..geqevtvaagetrevpvtvtappedlk.sgkteirfkvtal.dp.gee 110
                 e++ ++  + ++++v+ g+  + ++t+t+p+ed +  +  e +fk t+  ++ +++
  MMETSP1325-20131115|9081_1 231 ETIAVEsdEGSTIDVEVGQHNDGTFTITVPSEDTPtTQHVEATFKATSEgTTmEVV 286
                 444444558899**********************6466667778877764332444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.36s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 1872.71
//
Query:       MMETSP1325-20131115|9089_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.27   10.6   0.0    1.7  1  PF12551.3 Poly-beta-hydroxybutyrate polymerase N terminal


Domain annotation for each model (and alignments):
>> PF12551.3  Poly-beta-hydroxybutyrate polymerase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0     2e-05      0.27      16      28 ..      73      85 ..      66      88 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 2e-05
   PF12551.3 16 alArlTgGlSPaa 28
                alA +TgGlSP+a
  MMETSP1325-20131115|9089_1 73 ALAGVTGGLSPVA 85
                79*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 645.55
//
Query:       MMETSP1325-20131115|9086_1  [L=390]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       505  (0.0369368); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 0.38s 00:00:01.06 Elapsed: 00:00:00.71
# Mc/sec: 1316.31
//
Query:       MMETSP1325-20131115|9091_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.2   12.0   2.7       0.19   12.1   0.9    1.6  2  PF12273.3 Chitin synthesis regulation, resistance to Congo red


Domain annotation for each model (and alignments):
>> PF12273.3  Chitin synthesis regulation, resistance to Congo red
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       0.3     4e+03      36      36 ..      50      50 ..      12      81 .. 0.60
   2 ?   12.1   0.9   1.4e-05      0.19      27      68 ..     101     141 ..      96     154 .. 0.74

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.3
   PF12273.3 36 g 36
                g
  MMETSP1325-20131115|9091_1 50 G 50
                2 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 1.4e-05
   PF12273.3  27 rrkGlqpiygtaWlapPsyrqsqqqYnaqqqrdeayvPeyte 68 
                 rr+G++p+ + +W+   s  ++q+q ++q   +++++P++++
  MMETSP1325-20131115|9091_1 101 RRQGQEPVVNENWMDMESVAREQAQAQSQG-GSATRSPTKKQ 141
                 788************888877777765444.45567776443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 767.81
//
Query:       MMETSP1325-20131115|9088_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 941.43
//
Query:       MMETSP1325-20131115|9090_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   14.3   0.5       0.56    9.9   0.5    2.2  2  PF05620.6 Protein of unknown function (DUF788)
      0.032   14.1   1.0      0.032   14.1   0.7    4.0  4  PF13400.1 Putative Flp pilus-assembly TadE/G-like


Domain annotation for each model (and alignments):
>> PF05620.6  Protein of unknown function (DUF788)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.5   8.2e-05      0.56       1      60 [.      46     105 ..      46     124 .. 0.74
   2 ?    2.0   0.0     0.022   1.5e+02     119     165 ..     186     232 ..     155     237 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 8.2e-05
   PF05620.6   1 MAnksaKkraaknkkilkqlllillain.llyllvrllflyssvtfrsllalvllslpaif 60 
                 +A+++ K+++a+ +++ ++++ ++++++ +l++l++ll ++   +f+s+l +v++ ++  +
  MMETSP1325-20131115|9090_1  46 VASAGMKRTKAQRNAMANKIRCGMVTASiILAVLFALLAILDMRSFASFLCVVVFIVV-GV 105
                 5999********9999999999877665155667777778888887787755554443.33 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.022
   PF05620.6 119 lylviPayaiYklyglvk.klgsnasaseeqeaeteeeekskrqekle 165
                 ++lvi +y+ + l + ++ ++   ++++++q+a t+ ++k+k++ k e
  MMETSP1325-20131115|9090_1 186 VLLVIVLYLRFGLRKALNiSFDLEKGSDKTQTAATT-ATKTKDETKDE 232
                 455555666666655554545555566666655555.77777777765 PP

>> PF13400.1  Putative Flp pilus-assembly TadE/G-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.7   4.6e-06     0.032       6      36 ..      27      58 ..      24      62 .. 0.90
   2 ?    1.3   2.2     0.047   3.2e+02       6      24 ..      69      88 ..      68      89 .. 0.78
   3 ?    0.6   0.2     0.078   5.4e+02       8      21 ..      92     105 ..      90     112 .. 0.51
   4 ?   -4.4   3.5         2   1.4e+04       3      18 ..     176     191 ..     174     194 .. 0.59

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.6e-06
   PF13400.1  6 lfalallplLllaglav.DvgrallartrlQs 36
                ++a++++p+ ll+  ++ Dv+ a + rt++Q+
  MMETSP1325-20131115|9090_1 27 ILAVFMVPATLLVCTMWiDVASAGMKRTKAQR 58
                89*********8888888*************8 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.047
   PF13400.1  6 lfalallplLllaglav.Dv 24
                ++++++++++l+a la+ D+
  MMETSP1325-20131115|9090_1 69 MVTASIILAVLFALLAIlDM 88
                56778888888999999886 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.078
   PF13400.1   8 alallplLllagla 21 
                 a +l ++++++ ++
  MMETSP1325-20131115|9090_1  92 ASFLCVVVFIVVGV 105
                 44444444444443 PP

  == domain 4    score: -4.4 bits;  conditional E-value: 2
   PF13400.1   3 aavlfalallplLlla 18 
                 ++++f+ +  +lL+++
  MMETSP1325-20131115|9090_1 176 VMIMFVTMSGVLLVIV 191
                 4446666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1217  (0.089014); expected 273.4 (0.02)
Passed bias filter:                      559  (0.0408865); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:00.63
# Mc/sec: 969.95
//
Query:       MMETSP1325-20131115|9092_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|9093_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   20.9   0.1    0.00014   20.9   0.1    1.4  2  PF13651.1  Adenine-specific methyltransferase EcoRI
     0.0037   16.6   0.0     0.0056   16.0   0.0    1.2  1  PF05869.6  DNA N-6-adenine-methyltransferase (Dam)
  ------ inclusion threshold ------
       0.21   11.7   7.9        0.4   10.8   5.5    1.4  1  PF09026.5  Centromere protein B dimerisation domain
        4.3    4.8   6.0        5.4    4.5   4.1    1.1  1  PF04931.8  DNA polymerase phi
        9.6    5.9  14.4         14    5.3  10.0    1.1  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31


Domain annotation for each model (and alignments):
>> PF13651.1  Adenine-specific methyltransferase EcoRI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.2       1.7   4.7e+03      85      88 ..      25      28 ..       8      47 .. 0.42
   2 !   20.9   0.1     5e-08   0.00014     136     165 ..     122     151 ..     116     173 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 1.7
   PF13651.1 85 kvde 88
                ++de
  MMETSP1325-20131115|9093_1 25 QYDE 28
                1111 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 5e-08
   PF13651.1 136 aDivvtnPPFslFreflallveydkkflii 165
                 ++i+vtnPPFs+ + ++  l + dk f++i
  MMETSP1325-20131115|9093_1 122 GEIIVTNPPFSMMKTIIPRLKQLDKPFILI 151
                 57**************************99 PP

>> PF05869.6  DNA N-6-adenine-methyltransferase (Dam)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.1e-06    0.0056      66     135 ..     124     189 ..     112     199 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.1e-06
   PF05869.6  66 avflNPPYSreikpfvkkaieqrekgaktvvllkaadsetaWfeealkkadeivfir..GRvaFispetgee 135
                  + +NPP+S  +k ++ +    ++ ++ ++++l a++ ++a+ ++ +  +d i+ i   GR++F + e ge 
  MMETSP1325-20131115|9093_1 124 IIVTNPPFSM-MKTIIPRL---KQLDKPFILILPAHKLNAAYLRNHF--KDAIQLIIpcGRINFLKYENGEL 189
                 3479******.99999864...3455667888888899999999866..6666666666*****99888875 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   5.5   0.00015       0.4       9      44 ..      12      46 ..       5      75 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00015
   PF09026.5  9 eedsesdseeeeedeeedeededeedeeeddevpvp 44
                + + ++d e +ee+ +ede ++de+d++++d   + 
  MMETSP1325-20131115|9093_1 12 QSQRKADEELDEEQYDEDE-EQDEDDDKDGDYAALR 46
                4444555555566666666.5688888888876654 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   4.1     0.002       5.4     668     694 ..      16      42 ..       8      67 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.002
   PF04931.8 668 iedseseseddsEdgeedEkedddeav 694
                   d e ++e  +Ed+e+dE++d d + 
  MMETSP1325-20131115|9093_1  16 KADEELDEEQYDEDEEQDEDDDKDGDY 42 
                 456677777777777777777777654 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  10.0    0.0051        14     182     214 ..      14      47 ..       2      48 .. 0.60

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0051
   PF11705.3 182 kkeeeeeeeeeeedddf.eDdddddedDYnaekY 214
                 + +++ee +ee+ d+d  +D+ddd+++DY a  Y
  MMETSP1325-20131115|9093_1  14 QRKADEELDEEQYDEDEeQDEDDDKDGDYAALRY 47 
                 23334555555444443248899999***77776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       538  (0.0393505); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.46s 00:00:01.02 Elapsed: 00:00:00.56
# Mc/sec: 924.91
//
Query:       MMETSP1325-20131115|9095_1  [L=450]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.066   12.8   0.3      0.066   12.8   0.2    2.6  2  PF10158.4  Tumour suppressor protein
       0.26   10.3   0.8        5.1    6.0   0.1    2.1  2  PF05992.7  SbmA/BacA-like family
        0.8    7.3   3.1        2.4    5.7   0.1    2.0  2  PF02364.10 1,3-beta-glucan synthase component
        5.9    7.0  11.8       0.66   10.0   0.6    3.2  3  PF09487.5  Bacterial type III secretion protein (HrpB2)


Domain annotation for each model (and alignments):
>> PF10158.4  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   1.9e-05     0.066      46      97 ..     166     218 ..     151     237 .. 0.79
   2 ?   -1.9   0.1       0.7   2.4e+03      51      67 ..     272     288 ..     248     317 .. 0.61

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.9e-05
   PF10158.4  46 avaadqnklvkrikevdakietllaelrekqkryasyaeqlsk.vnelsdqls 97 
                 +  a  ++  k i +vda+i   l++l +++++ya+ + q+++ v+ +s+++ 
  MMETSP1325-20131115|9095_1 166 NQVAKNARCWKDIESVDADIRGELENLAAMKENYAQQMSQIARtVEGMSHKVN 218
                 444566788899*****************************863788998875 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.7
   PF10158.4  51 qnklvkrikevdakiet 67 
                 q+kl+++ k+ + + ++
  MMETSP1325-20131115|9095_1 272 QAKLAETAKQSELHTQS 288
                 44444444444433333 PP

>> PF05992.7  SbmA/BacA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1    0.0015       5.1      89     117 ..     193     222 ..     190     232 .. 0.89
   2 ?    2.5   0.0     0.018        62     189     206 ..     376     393 ..     363     405 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0015
   PF05992.7  89 tamneyyiskwdkl.reieGasqrvqedtl 117
                 +am+e y ++ +++ r++eG s +v e ++
  MMETSP1325-20131115|9095_1 193 AAMKENYAQQMSQIaRTVEGMSHKVNERIV 222
                 59********99988***********9876 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.018
   PF05992.7 189 leynnqkveaayrkelvy 206
                  ey +q+  aa+rke v+
  MMETSP1325-20131115|9095_1 376 HEYALQQSAAAFRKESVL 393
                 59*************997 PP

>> PF02364.10  1,3-beta-glucan synthase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3     0.009        31      96     192 ..      63     157 ..      44     167 .. 0.69
   2 ?    5.7   0.1   0.00071       2.4      91     154 ..     182     246 ..     163     287 .. 0.79

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.009
  PF02364.10  96 eeeeklkdeedlakkkiddlpfyviGfksaapeytlrtriwaslrsqt.lyrtvsgfmnysraikllyrvenpevvqlfagnseklerelekmarrkf 192
                 + + + ++ee+++++ i  l  +   + +aa+e  l   ++++l  q  ++r++    n +++ +   + +     q    +  ++++e+++ a rk+
  MMETSP1325-20131115|9095_1  63 NAQIE-SREEEWIEEAIASLRTSGATLAQAAKEELLHGDLDSALAEQAeMLRALTQQVNALESTSSTSTRDRLAARQ--IEDDYHTLQEQSEEALRKY 157
                 33434.45558********************************9886515777777777776666544433333333..3444455556667777776 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.00071
  PF02364.10  91 ekeaeeeeeklkdeedlakkkiddlpfyviGfksaapeytlrtriwasl.rsqtlyrtvsgfmny 154
                 + +   e e+l+  ++ +++++ +++++v G+ +   e ++  r+ a+l r+  l+ ++  f + 
  MMETSP1325-20131115|9095_1 182 DADIRGELENLAAMKENYAQQMSQIARTVEGMSHKVNERIVEIRMQAALaRADALHASITTFCGP 246
                 4555556667777778999****************************984668899999999765 PP

>> PF09487.5  Bacterial type III secretion protein (HrpB2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.6   0.00019      0.66      45      84 ..     101     140 ..      76     149 .. 0.83
   2 ?    3.6   0.3     0.018        62      47     103 ..     176     233 ..     152     243 .. 0.71
   3 ?   -3.1   0.1       2.3   7.7e+03      87      97 ..     275     285 ..     254     309 .. 0.54

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00019
   PF09487.5  45 vsklvekqdealrkvlddvaaleenakemslneiaaasir 84 
                 +  ++++q+e lr+ +++v+ale + ++ + +++aa++i+
  MMETSP1325-20131115|9095_1 101 LDSALAEQAEMLRALTQQVNALESTSSTSTRDRLAARQIE 140
                 567899********************************97 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.018
   PF09487.5  47 klvekqdealrkvlddvaaleenakemslnei..aaasirlqleiaslqvdlqvkvsvv 103
                 k +e+ d+ +r  l++ aa++en   + +++i  +++ +  +++   +++ +q+ ++ +
  MMETSP1325-20131115|9095_1 176 KDIESVDADIRGELENLAAMKENYA-QQMSQIarTVEGMSHKVNERIVEIRMQAALARA 233
                 567888999**********998854.457777446777776666667777777666555 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 2.3
   PF09487.5  87 leiaslqvdlq 97 
                 l  ++ q +l+
  MMETSP1325-20131115|9095_1 275 LAETAKQSELH 285
                 22222232222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1242  (0.0908426); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.99u 0.36s 00:00:01.35 Elapsed: 00:00:00.56
# Mc/sec: 1891.86
//
Query:       MMETSP1325-20131115|9097_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.044   13.5   3.6       0.46   10.2   0.0    2.3  2  PF04611.7 Mating type protein A alpha Y mating type dependent binding region


Domain annotation for each model (and alignments):
>> PF04611.7  Mating type protein A alpha Y mating type dependent binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   3.4e-05      0.46      61     101 ..      82     122 ..      46     136 .. 0.82
   2 ?    2.9   1.2    0.0059        80     102     140 ..     196     235 ..     187     240 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 3.4e-05
   PF04611.7  61 lPakaiksalsayekaCarWrsdleeafdktaksvsPanlh 101
                  P+  +ks+ +  e a arWr+++e +    a+  +P+++ 
  MMETSP1325-20131115|9097_1  82 PPTVDLKSTSKDLELAVARWRREVEASAASRAEHGLPSDVA 122
                 46667999******************999999988888765 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.0059
   PF04611.7 102 llealrfrlyteqvekWlvqvlev.aerWkaemekqrahi 140
                  l++ + +l+ +q    ++   +   + W +e +kqra +
  MMETSP1325-20131115|9097_1 196 ELKQQQQQLFLQQASVHTAATADReEAAWAEEEAKQRAIV 235
                 4566778899999887777666551568*********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       565  (0.0413253); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.34s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1228.77
//
Query:       MMETSP1325-20131115|9096_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-34  117.1   1.7    1.8e-19   69.3   0.2    3.2  3  PF13424.1  Tetratricopeptide repeat
    1.3e-28   97.8   6.2    1.4e-13   50.0   0.0    4.0  4  PF13374.1  Tetratricopeptide repeat
    1.6e-14   52.3   0.5    4.3e-07   29.1   0.0    3.2  3  PF13176.1  Tetratricopeptide repeat
    1.7e-12   46.7   1.7    1.8e-07   30.5   0.3    2.5  2  PF13414.1  TPR repeat
      2e-12   46.0   1.3    9.4e-06   24.9   0.1    3.4  3  PF00515.23 Tetratricopeptide repeat
    4.8e-11   41.5   3.0      7e-05   22.3   0.0    3.5  4  PF07719.12 Tetratricopeptide repeat
    2.5e-10   39.2   2.0     0.0012   18.4   0.0    3.5  4  PF13181.1  Tetratricopeptide repeat
      2e-07   30.9   5.6      0.014   15.9   0.0    4.1  4  PF13428.1  Tetratricopeptide repeat
    5.8e-07   29.8   0.1    5.8e-07   29.8   0.1    2.9  3  PF13432.1  Tetratricopeptide repeat
    8.6e-05   22.3   0.1        5.2    7.4   0.0    4.1  4  PF13431.1  Tetratricopeptide repeat
     0.0006   19.9   1.4        1.4    9.3   0.0    3.3  3  PF13174.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.3   0.7        0.2   11.5   0.0    2.5  2  PF12688.2  Tetratrico peptide repeat
       0.11   12.5   0.9        9.3    6.2   0.1    2.4  2  PF13618.1  Gluconate 2-dehydrogenase subunit 3


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.068        72      26      56 ..      60      89 ..      59      94 .. 0.86
   2 !   69.3   0.2   1.7e-22   1.8e-19       6      77 ..     149     221 ..     144     222 .. 0.96
   3 !   54.3   0.0     8e-18   8.4e-15       5      61 ..     190     247 ..     189     248 .] 0.94

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.068
   PF13424.1 26 elyekalellrelgddhpdtaralnnlanly 56
                +++ kal+  r  g +h+ + ++l  +a++ 
  MMETSP1325-20131115|9096_1 60 NHFLKALATSRNSGAEHH-IGTILVMIADID 89
                6899*****99***9997.699999999875 PP

  == domain 2    score: 69.3 bits;  conditional E-value: 1.7e-22
   PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77 
                 ++ nnl+ +l+ +gdy+ A  lye++l+  +++lgd+h  t++a nnl+ +y+++g+yd+A++++e+Al+ ++
  MMETSP1325-20131115|9096_1 149 ALANNLGSLLMDMGDYEGAKPLYEEVLAAsREVLGDRHRKTLTAINNLGGVYEKMGEYDKARPLYEEALAGRR 221
                 5679*****************************************************************9987 PP

  == domain 3    score: 54.3 bits;  conditional E-value: 8e-18
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgd 61 
                  t+ nnl++v++++g+yd+A+ lye+al+  +++lg+ hp+t+++ nnla l+  +gd
  MMETSP1325-20131115|9096_1 190 LTAINNLGGVYEKMGEYDKARPLYEEALAGrRETLGESHPETLKSINNLAMLLKTMGD 247
                 57789*************************88899******************99998 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.2   2.3e+03      23      40 ..      60      76 ..      59      78 .. 0.78
   2 !   41.5   0.1   6.7e-14   7.1e-11       5      40 ..     151     186 ..     149     188 .. 0.96
   3 !   50.0   0.0   1.4e-16   1.4e-13       1      42 []     189     230 ..     189     230 .. 0.98
   4 !    7.3   0.0     0.004       4.2       1      17 [.     231     247 ..     231     248 .] 0.90

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 2.2
   PF13374.1 23 aleeealairrrllGddH 40
                +++ +ala+ r   G++H
  MMETSP1325-20131115|9096_1 60 NHFLKALATSRNS-GAEH 76
                5667899999998.9888 PP

  == domain 2    score: 41.5 bits;  conditional E-value: 6.7e-14
   PF13374.1   5 lnnLAlalrargryeeAlaleeealairrrllGddH 40 
                 +nnL+ +l+++g+ye A +l+ee+la  r++lGd H
  MMETSP1325-20131115|9096_1 151 ANNLGSLLMDMGDYEGAKPLYEEVLAASREVLGDRH 186
                 7**********************************9 PP

  == domain 3    score: 50.0 bits;  conditional E-value: 1.4e-16
   PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                 t++a nnL+ ++ ++g+y++A++l+eeala rr+ lG+ HP+
  MMETSP1325-20131115|9096_1 189 TLTAINNLGGVYEKMGEYDKARPLYEEALAGRRETLGESHPE 230
                 89***************************************6 PP

  == domain 4    score: 7.3 bits;  conditional E-value: 0.004
   PF13374.1   1 taaalnnLAlalrargr 17 
                 t+ + nnLA++l ++g+
  MMETSP1325-20131115|9096_1 231 TLKSINNLAMLLKTMGD 247
                 67899*********997 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.5e-07   0.00036       2      32 ..     150     181 ..     149     185 .. 0.84
   2 !   29.1   0.0   4.1e-10   4.3e-07       1      35 [.     192     226 ..     192     227 .. 0.92
   3 ?   -1.3   0.0       2.2   2.3e+03       1      14 [.     234     247 ..     234     248 .] 0.84

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 3.5e-07
   PF13176.1   2 l.lnLarlysrlgdyekAielyeraLaltkdp 32 
                 l +nL++l +++gdye A  lye+ La  ++ 
  MMETSP1325-20131115|9096_1 150 LaNNLGSLLMDMGDYEGAKPLYEEVLAASREV 181
                 559*********************88766554 PP

  == domain 2    score: 29.1 bits;  conditional E-value: 4.1e-10
   PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdplda 35 
                 a++nL+ +y+++g+y+kA  lye+aLa +++ l++
  MMETSP1325-20131115|9096_1 192 AINNLGGVYEKMGEYDKARPLYEEALAGRRETLGE 226
                 789***********************999988765 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 2.2
   PF13176.1   1 allnLarlysrlgd 14 
                 +++nLa l   +gd
  MMETSP1325-20131115|9096_1 234 SINNLAMLLKTMGD 247
                 579***99998887 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.3   1.7e-10   1.8e-07       5      66 ..     150     218 ..     144     218 .. 0.84
   2 !   22.4   0.0   5.8e-08   6.1e-05       5      52 ..     192     247 ..     188     248 .] 0.84

  Alignments for each domain:
  == domain 1    score: 30.5 bits;  conditional E-value: 1.7e-10
   PF13414.1   5 alkelGnalfkegdydeAieayekAleld........pnnae...lyynlAlaylklgkdyeeAledyekAle 66 
                  +++lG  l+ +gdy++A  +ye+ l+ +            +   + +nl+ +y+k+g +y++A+  ye+Al+
  MMETSP1325-20131115|9096_1 150 LANNLGSLLMDMGDYEGAKPLYEEVLAASrevlgdrhR---KtltAINNLGGVYEKMG-EYDKARPLYEEALA 218
                 579************************96333332223...2566*************.6***********95 PP

  == domain 2    score: 22.4 bits;  conditional E-value: 5.8e-08
   PF13414.1   5 alkelGnalfkegdydeAieayekAle.....ldpnnae...lyynlAlaylklgk 52 
                 a ++lG ++ k+g+yd+A  +ye+Al+     l ++++e     +nlA ++  +g+
  MMETSP1325-20131115|9096_1 192 AINNLGGVYEKMGEYDKARPLYEEALAgrretLGESHPEtlkSINNLAMLLKTMGD 247
                 579***********************8655556666777666999***99999995 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   2.2e-06    0.0023       5      29 ..     152     176 ..     150     179 .. 0.95
   2 !   24.9   0.1   8.9e-09   9.4e-06       3      28 ..     192     217 ..     191     218 .. 0.94
   3 ?    0.3   0.0       0.5   5.2e+02       5      16 ..     236     247 ..     233     248 .] 0.87

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 2.2e-06
                 HHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALe 29 
                 +nlG +++ +g+y+ A   ye++L 
  MMETSP1325-20131115|9096_1 152 NNLGSLLMDMGDYEGAKPLYEEVLA 176
                 8*********************995 PP

  == domain 2    score: 24.9 bits;  conditional E-value: 8.9e-09
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekAL 28 
                 a +nlG +y k+g+yd+A   ye+AL
  MMETSP1325-20131115|9096_1 192 AINNLGGVYEKMGEYDKARPLYEEAL 217
                 569**********************9 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.5
                 HHHHHHHHHTT- CS
  PF00515.23   5 ynlGnaylklgk 16 
                 +nl++++  +g+
  MMETSP1325-20131115|9096_1 236 NNLAMLLKTMGD 247
                 9*******9998 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.8   6.1e+03      22      32 ..      39      49 ..      38      50 .. 0.84
   2 ?   -1.5   0.0       2.7   2.9e+03      22      29 ..      60      67 ..      59      71 .. 0.79
   3 !   17.7   0.0   1.9e-06     0.002       4      29 ..     151     176 ..     148     180 .. 0.91
   4 !   22.3   0.0   6.6e-08     7e-05       3      29 ..     192     218 ..     191     218 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 5.8
                HHHHHHHHH-T CS
  PF07719.12 22 eafekAleldP 32
                e++  A++ +P
  MMETSP1325-20131115|9096_1 39 ELYATAVARNP 49
                78999999998 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 2.7
                HHHHHHHH CS
  PF07719.12 22 eafekAle 29
                ++f kAl+
  MMETSP1325-20131115|9096_1 60 NHFLKALA 67
                79999997 PP

  == domain 3    score: 17.7 bits;  conditional E-value: 1.9e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   4 lynlGlayyklgdyeeAleafekAle 29 
                  +nlG +++ +gdye A+ ++e++l+
  MMETSP1325-20131115|9096_1 151 ANNLGSLLMDMGDYEGAKPLYEEVLA 176
                 589*********************97 PP

  == domain 4    score: 22.3 bits;  conditional E-value: 6.6e-08
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAle 29 
                 a +nlG +y+k+g+y++A+ ++e+Al+
  MMETSP1325-20131115|9096_1 192 AINNLGGVYEKMGEYDKARPLYEEALA 218
                 5689*********************96 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.9   6.3e+03      22      31 ..      60      69 ..      58      71 .. 0.73
   2 !   18.4   0.0   1.1e-06    0.0012       5      31 ..     152     178 ..     148     180 .. 0.90
   3 !   17.7   0.0   1.7e-06    0.0018       5      28 ..     194     217 ..     190     221 .. 0.92
   4 ?   -0.3   0.0         1   1.1e+03       5      16 ..     236     247 ..     232     248 .] 0.85

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 5.9
                HHHH---HHH CS
   PF13181.1 22 eylekalelk 31
                +++ kal  +
  MMETSP1325-20131115|9096_1 60 NHFLKALATS 69
                7899998765 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 1.1e-06
                 TT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekalelk 31 
                 +nlG++++++Gdy+ Ak  +e++l  +
  MMETSP1325-20131115|9096_1 152 NNLGSLLMDMGDYEGAKPLYEEVLAAS 178
                 79*********************9766 PP

  == domain 3    score: 17.7 bits;  conditional E-value: 1.7e-06
                 TT---HHHHTT-HHHHHHHHH--- CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekal 28 
                 +nlG +Y+++G+ydkA   +e+al
  MMETSP1325-20131115|9096_1 194 NNLGGVYEKMGEYDKARPLYEEAL 217
                 79*********************8 PP

  == domain 4    score: -0.3 bits;  conditional E-value: 1
                 TT---HHHHTT- CS
   PF13181.1   5 ynlGdiYrqlGd 16 
                 +nl+++++ +Gd
  MMETSP1325-20131115|9096_1 236 NNLAMLLKTMGD 247
                 79*******998 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       6.7     7e+03      22      33 ..      39      50 ..      38      58 .. 0.80
   2 ?    1.8   0.8      0.43   4.5e+02       4      30 ..     126     152 ..     123     155 .. 0.84
   3 !   13.8   0.1   6.1e-05     0.064       4      33 ..     151     180 ..     147     189 .. 0.85
   4 !   15.9   0.0   1.3e-05     0.014       4      30 ..     193     219 ..     190     233 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 6.7
   PF13428.1 22 allrralalaPd 33
                +l+  a+a++P 
  MMETSP1325-20131115|9096_1 39 ELYATAVARNPL 50
                688999999996 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.43
   PF13428.1   4 llalarallalGdpdeAiallrralal 30 
                 ++al r+ +++ d + A++ +r ala 
  MMETSP1325-20131115|9096_1 126 RRALLRVARDAVDAQSAEEKARGALAN 152
                 678899999999999999999999986 PP

  == domain 3    score: 13.8 bits;  conditional E-value: 6.1e-05
   PF13428.1   4 llalarallalGdpdeAiallrralalaPd 33 
                    l+ +l+++Gd+++A  l++++la++ +
  MMETSP1325-20131115|9096_1 151 ANNLGSLLMDMGDYEGAKPLYEEVLAASRE 180
                 45799********************98765 PP

  == domain 4    score: 15.9 bits;  conditional E-value: 1.3e-05
   PF13428.1   4 llalarallalGdpdeAiallrralal 30 
                    l+ +++ +G++d+A+ l+++ala 
  MMETSP1325-20131115|9096_1 193 INNLGGVYEKMGEYDKARPLYEEALAG 219
                 567999******************984 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1       1.8   1.9e+03      18      31 ..      39      52 ..      38      67 .. 0.80
   2 !   10.4   0.2   0.00072      0.76      17      58 ..     134     175 ..     105     176 .. 0.68
   3 !   29.8   0.1   5.5e-10   5.8e-07       3      60 ..     154     219 ..     152     226 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 1.8
   PF13432.1 18 aaleaalalaPeaa 31
                +++ +a+a++P+ +
  MMETSP1325-20131115|9096_1 39 ELYATAVARNPLFV 52
                68899999999854 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00072
   PF13432.1  17 laaleaalalaPeaaeallllaeallrlgrldeAaallraal 58 
                 ++a +a  a++        +l+ +l+++g++++A  l+++ l
  MMETSP1325-20131115|9096_1 134 RDAVDAQSAEEKARGALANNLGSLLMDMGDYEGAKPLYEEVL 175
                 445544444445566666666666666666666666666544 PP

  == domain 3    score: 29.8 bits;  conditional E-value: 5.5e-10
   PF13432.1   3 lArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraalal 60 
                 l+ +l++ Gdy+ A +++e++la+          +   a  +l+ ++ ++g++d+A+ l+++ala+
  MMETSP1325-20131115|9096_1 154 LGSLLMDMGDYEGAKPLYEEVLAASrevlgdrhRKTLTAINNLGGVYEKMGEYDKARPLYEEALAG 219
                 7889*********************8888777777**********************999999954 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       7.7   8.1e+03       1      10 [.      40      49 ..      40      52 .. 0.83
   2 !    7.4   0.0     0.005       5.2      17      33 ..     152     168 ..     147     169 .. 0.91
   3 !    6.8   0.0    0.0075       7.9      15      33 ..     192     210 ..     191     211 .. 0.93
   4 ?    3.0   0.0      0.13   1.3e+02      14      28 ..     233     247 ..     226     248 .] 0.81

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 7.7
   PF13431.1  1 lyekaleldP 10
                ly  a++++P
  MMETSP1325-20131115|9096_1 40 LYATAVARNP 49
                6889999999 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.005
   PF13431.1  17 nnLAelllnnGdleeAe 33 
                 nnL+ ll + Gd+e A+
  MMETSP1325-20131115|9096_1 152 NNLGSLLMDMGDYEGAK 168
                 9*************996 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0075
   PF13431.1  15 aynnLAelllnnGdleeAe 33 
                 a nnL+ ++ + G++++A+
  MMETSP1325-20131115|9096_1 192 AINNLGGVYEKMGEYDKAR 210
                 689***************8 PP

  == domain 4    score: 3.0 bits;  conditional E-value: 0.13
   PF13431.1  14 daynnLAelllnnGd 28 
                  + nnLA ll+  Gd
  MMETSP1325-20131115|9096_1 233 KSINNLAMLLKTMGD 247
                 688********9998 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2       3.4   3.6e+03       2      23 ..     128     150 ..     127     152 .. 0.68
   2 !    7.7   0.0    0.0045       4.7       6      28 ..     154     176 ..     153     178 .. 0.86
   3 !    9.3   0.0    0.0014       1.4       6      27 ..     196     217 ..     195     218 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 3.4
                 HHHHHHHHHHH.HHHHHHHHHHH CS
   PF13174.1   2 Alyklalsyyk.lgdtdeAleal 23 
                 Al++ a+     +   ++A+ al
  MMETSP1325-20131115|9096_1 128 ALLRVARDAVDaQSAEEKARGAL 150
                 78888877776555667887776 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0045
                 HHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerlik 28 
                 l+ ++  +gd++ A+ ++e++++
  MMETSP1325-20131115|9096_1 154 LGSLLMDMGDYEGAKPLYEEVLA 176
                 777777899***********986 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.0014
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   6 lalsyyklgdtdeAlealerli 27 
                 l+ +y+k+g++d+A+ ++e+ +
  MMETSP1325-20131115|9096_1 196 LGGVYEKMGEYDKARPLYEEAL 217
                 7778***9***********976 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.27   2.8e+02      14      30 ..     161     177 ..     148     192 .. 0.79
   2 ?   11.5   0.0   0.00019       0.2       6      29 ..     195     218 ..     190     235 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.27
   PF12688.2  14 tGeeakAvplYrrAlaa 30 
                  G+ + A plY++ laa
  MMETSP1325-20131115|9096_1 161 MGDYEGAKPLYEEVLAA 177
                 58889999999999887 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00019
   PF12688.2   6 eragarDstGeeakAvplYrrAla 29 
                 + +g+++  Ge +kA plY++Ala
  MMETSP1325-20131115|9096_1 195 NLGGVYEKMGEYDKARPLYEEALA 218
                 5699******************97 PP

>> PF13618.1  Gluconate 2-dehydrogenase subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.029        30      59      88 ..      41      71 ..      37      86 .. 0.80
   2 ?    6.2   0.1    0.0088       9.3      33     100 ..      88     149 ..      80     161 .. 0.69

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.029
   PF13618.1 59 earaehgks.FaelsaaqqdalLraleagel 88
                +a a +  + F++++ aq+   L+al+++  
  MMETSP1325-20131115|9096_1 41 YATAVARNPlFVAMDVAQRNHFLKALATSRN 71
                5666666777****************98775 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0088
   PF13618.1  33 idrqladarepeqreayreglaaldaearaehgksFaelsaaqqdalLraleageldgpawkgmssae 100
                 id+  a++r+pe+r+a++  l+al  +      ++ +el  +   + L  ++++++d+++ +++++ +
  MMETSP1325-20131115|9096_1  88 IDASKAECRNPEDRDAILSELEALVGT------RKLTELVRDLTRRALLRVARDAVDAQSAEEKARGA 149
                 777777899999999999999999744......55666666666666666666777666666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 1142.88
//
Query:       MMETSP1325-20131115|9098_1  [L=376]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-13   48.6   0.2    9.8e-13   47.4   0.2    1.5  1  PF04117.7 Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.2   7.2e-17   9.8e-13       8      52 ..     293     337 ..     286     338 .. 0.94

  Alignments for each domain:
  == domain 1    score: 47.4 bits;  conditional E-value: 7.2e-17
   PF04117.7   8 sleeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvn 52 
                  +++ + kl+++f  t++ nw +Wpa+++inF fvP+ +r+l++n
  MMETSP1325-20131115|9098_1 293 AWTTGCTKLRTEFSGTMLMNWRIWPAANFINFLFVPPALRLLYAN 337
                 58899**************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.38s 00:00:01.02 Elapsed: 00:00:00.53
# Mc/sec: 1700.06
//
Query:       MMETSP1325-20131115|9100_1  [L=417]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-05   24.2   0.9    4.4e-05   22.9   0.3    2.0  2  PF07282.6 Putative transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> PF07282.6  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.47   6.5e+03       5      19 ..     107     121 ..     105     122 .. 0.85
   2 !   22.9   0.3   3.2e-09   4.4e-05       8      53 ..     354     406 ..     351     411 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 0.47
   PF07282.6   5 qeqleykakeyGikv 19 
                 q+ql+y  k  G+ v
  MMETSP1325-20131115|9100_1 107 QKQLSYYFKTDGVAV 121
                 789999999999987 PP

  == domain 2    score: 22.9 bits;  conditional E-value: 3.2e-09
   PF07282.6   8 leykakeyGikvievnpayTSktCsvCgsknke.alsgrlf......kCpnCg 53 
                 l+   + +G  v+ +++++TS+ Cs C s+ ++ +l++r++      +C++C 
  MMETSP1325-20131115|9100_1 354 LRAMLHYFGCIVTLIDEYNTSRLCSSCHSVLHKvNLHDRRYpewglrVCKHCR 406
                 5555667999************************7777776333333677776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       462  (0.0337917); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.39s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 1959.37
//
Query:       MMETSP1325-20131115|9101_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|9102_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 520.75
//
Query:       MMETSP1325-20131115|9099_1  [L=955]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.032   13.6   1.2      0.064   12.6   0.8    1.5  1  PF07895.6  Protein of unknown function (DUF1673)
       0.22   10.9   4.1       0.43    9.9   2.9    1.4  1  PF01025.14 GrpE
       0.25   10.7   7.2       0.04   13.2   0.4    2.3  2  PF05529.7  B-cell receptor-associated protein 31-like


Domain annotation for each model (and alignments):
>> PF07895.6  Protein of unknown function (DUF1673)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.8   1.4e-05     0.064     124     186 ..     653     718 ..     618     728 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.4e-05
   PF07895.6 124 l..vrlllliilllillllflevilgevlsllsaqallslisgllll.mwlvylqliywekknhki 186
                 +  +  ++l+++l+i+  +f ++ ++ev   + +++++sl + +ll  m++   +++ w++ n   
  MMETSP1325-20131115|9099_1 653 MkkMVTVVLPVILVIFQNVFNSFANQEVGDYIANSSSISLTLIFLLPsMYPITTYKVGWMNTNDWA 718
                 222568999999999*************************99998888**************9755 PP

>> PF01025.14  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.9   9.5e-05      0.43       7      60 ..     342     395 ..     337     401 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 9.5e-05
  PF01025.14   7 eeeeedeeeeleeeleeleeevkelkdkllrllaefenlrkrtekekeeakkya 60 
                  e+++++ ee   el +l++++ke  d+ +r +a+++n++k++ + +e + + +
  MMETSP1325-20131115|9099_1 342 IETNATQLEEQTMELLKLKQQLKESDDSRKRMQAQLDNATKQYMRHQESLVEHE 395
                 56677888889999999****************************999877655 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.4   8.7e-06      0.04     151     190 ..     345     384 ..     307     385 .. 0.80
   2 ?    0.2   0.8     0.087     4e+02      19      61 ..     656     698 ..     643     708 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 8.7e-06
   PF05529.7 151 keekekklkeeveklkkeleekekdlealkkqaeglqkey 190
                 ++++ ++++ e+ klk++l+e++++ ++++ q+++ +k+y
  MMETSP1325-20131115|9099_1 345 NATQLEEQTMELLKLKQQLKESDDSRKRMQAQLDNATKQY 384
                 556677888999***************************9 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.087
   PF05529.7  19 lllLvlPlpspiRkklfksllksklseqfqtvlkiliilllll 61 
                 +++ vlP++  i +++f+s++++ +  ++     i + l++ll
  MMETSP1325-20131115|9099_1 656 MVTVVLPVILVIFQNVFNSFANQEVGDYIANSSSISLTLIFLL 698
                 67789**********************9999999998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (955 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1025  (0.0749707); expected 273.4 (0.02)
Passed bias filter:                      486  (0.0355471); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.60u 0.39s 00:00:01.99 Elapsed: 00:00:00.82
# Mc/sec: 2790.88
//
Query:       MMETSP1325-20131115|9106_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-09   36.6   0.2      5e-05   22.2   0.0    2.9  3  PF00036.27 EF hand
    5.9e-09   34.9   0.0    6.5e-05   22.3   0.0    2.9  3  PF13405.1  EF-hand domain
      1e-08   34.0   2.4    1.2e-05   24.3   0.1    2.5  2  PF13202.1  EF hand
    1.3e-07   31.4   0.2    2.8e-07   30.4   0.1    1.5  1  PF13499.1  EF-hand domain pair
    6.8e-07   28.6   0.8     0.0003   20.2   0.1    2.4  2  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.018   14.9   0.0      0.021   14.7   0.0    1.1  1  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
      0.032   14.1   0.0      0.052   13.4   0.0    1.3  1  PF07564.6  Domain of Unknown Function (DUF1542)


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.64   1.2e+03      13      17 ..      11      15 ..      10      21 .. 0.82
   2 !   22.2   0.0   2.5e-08     5e-05       6      27 ..      39      60 ..      30      62 .. 0.94
   3 !   11.3   0.1   7.7e-05      0.15       2      22 ..      72      92 .]      71      92 .] 0.91

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.64
                TSSEB CS
  PF00036.27 13 gdGkI 17
                +dG+I
  MMETSP1325-20131115|9106_1 11 HDGYI 15
                69999 PP

  == domain 2    score: 22.2 bits;  conditional E-value: 2.5e-08
                HHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  6 FkefDkDgdGkIsfeEfkealk 27
                F+++D DgdG+++ eE ++al+
  MMETSP1325-20131115|9106_1 39 FEKIDIDGDGTLTREEIQSALE 60
                99****************9986 PP

  == domain 3    score: 11.3 bits;  conditional E-value: 7.7e-05
                HHHHHHHHCTTTSSEBEHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEf 22
                l+ +++++D D +G I+  E+
  MMETSP1325-20131115|9106_1 72 LDSVINVIDEDDNGLIDRTEW 92
                67899*************996 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.44   8.7e+02      12      21 ..      10      19 ..       9      26 .. 0.76
   2 !   22.3   0.0   3.3e-08   6.5e-05       6      28 ..      39      61 ..      38      67 .. 0.93
   3 !    8.6   0.1   0.00087       1.7       2      21 ..      72      91 ..      71      92 .] 0.84

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.44
                -----B---H CS
   PF13405.1 12 dgdGkidaeE 21
                ++dG+i a +
  MMETSP1325-20131115|9106_1 10 THDGYIPAFQ 19
                689*997765 PP

  == domain 2    score: 22.3 bits;  conditional E-value: 3.3e-08
                -GCC-------B---HHHHHHH. CS
   PF13405.1  6 FklfDkdgdGkidaeELrdaLrk 28
                F+++D dgdG++++eE+++aL +
  MMETSP1325-20131115|9106_1 39 FEKIDIDGDGTLTREEIQSALEQ 61
                99******************985 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.00087
                HH---GCC-------B---H CS
   PF13405.1  2 lreaFklfDkdgdGkidaeE 21
                l ++ + +D d +G id+ E
  MMETSP1325-20131115|9106_1 72 LDSVINVIDEDDNGLIDRTE 91
                56677899*********998 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.1     6e-09   1.2e-05       5      23 ..      39      57 ..      37      59 .. 0.91
   2 !    9.5   0.2   0.00029      0.57       2      21 ..      73      92 .]      72      92 .] 0.88

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 6e-09
                HHHH--S----B-HHHHHH CS
   PF13202.1  5 FrafDlNgDGkIsreELkr 23
                F+++D +gDG+++reE + 
  MMETSP1325-20131115|9106_1 39 FEKIDIDGDGTLTREEIQS 57
                9***************875 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00029
                HHHHHHH--S----B-HHHH CS
   PF13202.1  2 kdtFrafDlNgDGkIsreEL 21
                +++ +++D +  G I+r E+
  MMETSP1325-20131115|9106_1 73 DSVINVIDEDDNGLIDRTEW 92
                567899*************8 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.1   1.4e-10   2.8e-07       5      61 ..      38      91 ..      29      92 .] 0.89

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 1.4e-10
   PF13499.1  5 aFkllDkdgdgyldkeeLlrllkhlgselsdeevre.vldyifkelDkngdGvlsfeE 61
                 F+++D dgdg+l++ee++ +l + +      +v +  ld +++ +D++ +G+++++E
  MMETSP1325-20131115|9106_1 38 SFEKIDIDGDGTLTREEIQSALEQVQ----GVQVAQpYLDSVINVIDEDDNGLIDRTE 91
                4*************************....888888899999*************998 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   3.1e-05     0.061      31      52 ..      39      60 ..      35      62 .. 0.91
   2 !   20.2   0.1   1.6e-07    0.0003       2      47 ..      47      92 .]      46      92 .] 0.93

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.1e-05
   PF13833.1 31 frefDtdgdGkisfeEFcvlle 52
                f ++D+dgdG ++ eE  ++le
  MMETSP1325-20131115|9106_1 39 FEKIDIDGDGTLTREEIQSALE 60
                7899************998876 PP

  == domain 2    score: 20.2 bits;  conditional E-value: 1.6e-07
   PF13833.1  2 kGlItreeLkral.allglkglseeevdilfrefDtdgdGkisfeEF 47
                +G +tree ++al + +g++ +    +d +++++D d++G i+  E+
  MMETSP1325-20131115|9106_1 47 DGTLTREEIQSALeQVQGVQ-VAQPYLDSVINVIDEDDNGLIDRTEW 92
                89*************99999.88888*****************9886 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.1e-05     0.021      56     110 ..      35      92 .]      11      92 .] 0.78

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.1e-05
   PF10591.4  56 veWkFnqlDtnkdkvlsksElaplrapl..vkl.ehCikeffksCDadkdkkisleEW 110
                     F+++D + d+ l+++E+++  +++  v++ +   ++ ++  D d+++ i+  EW
  MMETSP1325-20131115|9106_1  35 TTLSFEKIDIDGDGTLTREEIQSALEQVqgVQVaQPYLDSVINVIDEDDNGLIDRTEW 92 
                 4568*****************998888544333134456677778************9 PP

>> PF07564.6  Domain of Unknown Function (DUF1542)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.7e-05     0.052       4      25 ..      42      63 ..      40      67 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.7e-05
   PF07564.6  4 aaInnnpdlTdeEKaaaikkvd 25
                 +I+ + +lT+eE + a+++v+
  MMETSP1325-20131115|9106_1 42 IDIDGDGTLTREEIQSALEQVQ 63
                68******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       500  (0.0365711); expected 273.4 (0.02)
Passed bias filter:                      480  (0.0351083); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 459.30
//
Query:       MMETSP1325-20131115|9104_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   11.1   0.0       0.18   10.6   0.0    1.1  1  PF00155.16 Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> PF00155.16  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   1.3e-05      0.18     226     295 ..     151     216 ..     150     218 .. 0.94

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 1.3e-05
                 GGG----EEEE-HHHHHHHHHCCTTTS-----CCHHHHCTSHHHHHHHHHHHHHHHHHHHHHHHHCC.CC CS
  PF00155.16 226 aGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLael 295
                 +G   G++++na+++ +++k   +   s ++q++  +  + ++   +++ e++++l+k+r++lr +L+el
  MMETSP1325-20131115|9104_1 151 YG---GAVVANADLAHAVKKDIHQTPASRAVQKVFPKLCREDPSL-EFVLESADELEKKRERLRTQLREL 216
                 78...**********************************999976.6********************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 1140.87
//
Query:       MMETSP1325-20131115|9107_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-05   23.7   0.2    9.4e-05   22.1   0.0    1.7  2  PF14288.1 1,3-beta-glucan synthase subunit FKS1, domain-1


Domain annotation for each model (and alignments):
>> PF14288.1  1,3-beta-glucan synthase subunit FKS1, domain-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   6.9e-09   9.4e-05      89     110 ..       5      26 ..       3      31 .. 0.91
   2 ?   -1.1   0.0      0.11   1.5e+03      87     109 ..      66      88 ..      51      95 .. 0.71

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 6.9e-09
   PF14288.1  89 dhskiigYDDvNelFwskegle 110
                 dh ++++YDD+Ne+Fw +e+l+
  MMETSP1325-20131115|9107_1   5 DHIHVRNYDDFNEFFWGTECLT 26 
                 7999****************95 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.11
   PF14288.1  87 ekdhskiigYDDvNelFwskegl 109
                 ek   +i+ Y  + + Fw+   +
  MMETSP1325-20131115|9107_1  66 EKTFLEIRSYMALVNSFWRILFF 88 
                 45556778888887888876666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 702.93
//
Query:       MMETSP1325-20131115|9109_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 465.96
//
Query:       MMETSP1325-20131115|9111_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.072   12.6   0.0      0.086   12.3   0.0    1.2  1  PF09456.5 RcsC Alpha-Beta-Loop (ABL)


Domain annotation for each model (and alignments):
>> PF09456.5  RcsC Alpha-Beta-Loop (ABL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.3e-06     0.086       6      50 ..      32      76 ..      25      94 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 6.3e-06
   PF09456.5  6 vrNasLesfleelLsesGltvqryegeetseddvlitDdeealea 50
                vr  +Le  l++  ++sG+   ++eg  + +d+ l++D++++l+a
  MMETSP1325-20131115|9111_1 32 VREERLEGALQAHCARSGIAWEEFEGRLVPPDEELLSDTSSMLRA 76
                999************************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 483.88
//
Query:       MMETSP1325-20131115|9112_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 330.70
//
Query:       MMETSP1325-20131115|9113_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0004   19.9   0.3     0.0008   18.9   0.2    1.5  1  PF08514.6  STAG domain
  ------ inclusion threshold ------
      0.034   13.9   0.3      0.059   13.2   0.2    1.4  1  PF01951.11 Archease protein family (MTH1598/TM1083)
        0.2   11.6   0.4       0.27   11.2   0.3    1.1  1  PF09420.5  Ribosome biogenesis protein Nop16


Domain annotation for each model (and alignments):
>> PF08514.6  STAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.2   1.8e-07    0.0008      42     100 ..     128     186 ..     102     202 .. 0.81

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1.8e-07
   PF08514.6  42 vlfdnllsllvalsssqvRafRhtatlvalklmtaLvevakelseekettqkqleaekk 100
                 +++++++s l+ l +sq Ra+R   t + l+l+++Lv  +k  s  ++   k +e +kk
  MMETSP1325-20131115|9113_1 128 TVMQEIISQLTELRDSQERAVRIRQTELVLQLVNQLVATYKLDSAVMSFVVKLMELAKK 186
                 89***********************************9998777777777777765554 PP

>> PF01951.11  Archease protein family (MTH1598/TM1083)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   1.3e-05     0.059       9      78 ..     109     179 ..     104     204 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.3e-05
                 EE-EEE----SHHHHHHHHHHHHHHHS--TT---S--B---EE-SSSHHHHHHHHHHHHHHHHHT.--S-- CS
  PF01951.11   9 DvileaqGksleealesaaialfnymtdlskvepkkekeievegkdleklLfdfLdellylisae.rflfk 78 
                 Dv + +  + +ee+ e++a  + +++++l + + ++e+ +++++++l   L++ L     l sa   f++k
  MMETSP1325-20131115|9113_1 109 DVLYGGSSDYMEELQEHMATVMQEIISQLTELRDSQERAVRIRQTELVLQLVNQLVATYKLDSAVmSFVVK 179
                 999999999**********************************9988877777665544443332244444 PP

>> PF09420.5  Ribosome biogenesis protein Nop16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   5.9e-05      0.27     124     181 ..     123     180 ..      94     189 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.9e-05
   PF09420.5 124 eskeeeektevvkqLeeeasrpakkkerrlsereeewlerLvekHGdDykaMarDrKL 181
                 +++     +e+++qL e +++++ + + r++e   + + +Lv+ ++ D + M++  KL
  MMETSP1325-20131115|9113_1 123 QEHMATVMQEIISQLTELRDSQERAVRIRQTELVLQLVNQLVATYKLDSAVMSFVVKL 180
                 346677889************99899999***********************997775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       694  (0.0507607); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 1177.34
//
Query:       MMETSP1325-20131115|9108_1  [L=600]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (600 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.97u 0.38s 00:00:01.35 Elapsed: 00:00:00.61
# Mc/sec: 2357.07
//
Query:       MMETSP1325-20131115|9116_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-25   88.8   0.0    4.4e-25   88.0   0.0    1.3  1  PF05903.9 PPPDE putative peptidase domain
  ------ inclusion threshold ------
      0.057   13.2   0.0      0.087   12.6   0.0    1.2  1  PF04970.8 Lecithin retinol acyltransferase


Domain annotation for each model (and alignments):
>> PF05903.9  PPPDE putative peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.0   0.0   6.5e-29   4.4e-25       2     137 ..       3     143 ..       2     153 .. 0.87

  Alignments for each domain:
  == domain 1    score: 88.0 bits;  conditional E-value: 6.5e-29
   PF05903.9   2 kvklivydlsliktglarrvsllllGkklegiyhtgvevygkeyalggkekeesgit..........elkpkt......tsega.kfresielgeTevteeevreileelsae.yhgdkYnLiskNCnhFtddlvdlLtgkkiPkwinrlarik 137
                 +vkl+vydls+ +     +++++ lG     +yh+gvev g+ey++ g      g++          e++p        + ++a  fre+i+lg+T+ te+ev++i ++l  + + +++Y+ +++NCn+F+d+l + + g++iP ++nrla i+
  MMETSP1325-20131115|9116_1   3 EVKLNVYDLSPANG----VLRPVALG-----VYHSGVEVFGTEYTFAG----GAGVFshaplsppgfEAEPTAdvggggQGPIApVFREQIVLGTTTKTEQEVDAITRKLHDRfFGPQQYHVLKNNCNNFSDALSHEILGRGIPGRVNRLAGIG 143
                 79********8887....66898888.....7**************77....689997888888888666666788888555542489999*********************87999*********************************9886 PP

>> PF04970.8  Lecithin retinol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.3e-05     0.087      82     118 ..      85     121 ..      60     126 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.3e-05
                 TT---S-HHHHHHHHHHH---EESS---HHHHHHHHH CS
   PF04970.8  82 tkaeslpneeviqrAeellgqeveYsllsnNCEhFvt 118
                 t++++++++ + ++ + +    ++Y++l+nNC +F  
  MMETSP1325-20131115|9116_1  85 TTKTEQEVDAITRKLHDRFFGPQQYHVLKNNCNNFSD 121
                 78888999999999999888788***********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1060.61
//
Query:       MMETSP1325-20131115|9119_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-48  161.9   0.1    8.4e-48  161.6   0.0    1.1  1  PF00719.14 Inorganic pyrophosphatase


Domain annotation for each model (and alignments):
>> PF00719.14  Inorganic pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.6   0.0   6.1e-52   8.4e-48       1     155 [.      46     225 ..      46     226 .. 0.95

  Alignments for each domain:
  == domain 1    score: 161.6 bits;  conditional E-value: 6.1e-52
                 EEE-SB-TT--EEEEE-S----EEEEE.......E-SSSB--SSBB--BTT---............-----BEEEE--SS---TTEEEEEEE---EEEEE---BEEEEEEEETT-CCGT...T--SGGGS-HHHHHHHHHHHHHTTTTS...TT--EEE--B--HHHHHHHHHHHHHHHH CS
  PF00719.14   1 nvviEipkgsraKyeidkeegllpvdr.......llyvslkypanYGfipqtle............gDgDplDvlvlgseplapgsvvkvrvlGvlaliDegetDdKilavpvedpeyk...dikdvedlppgllkeieefFetykdle...enkfvkvegwkdaeeAlkvieeaieryk 155
                 n+v+Eipk sr+Kyei+++e+ +p+++         + + +  +nYG++p+t+e            gD+Dp+Dv+++g +p+ +gs+ +v+vlGvla+iD++etD+K++++++edp ++   di+dv++++pg+l +i+e+F+ yk ++   en+f+ +e + +a++A++vi e++++++
  MMETSP1325-20131115|9119_1  46 NFVCEIPKFSRKKYEIATKEPGNPIKQdekkgvlREFKRGDLQFNYGCLPRTWEdpntphpdtgfnGDDDPIDVCEIGLKPITTGSIRPVKVLGVLAMIDDEETDWKLVCIDAEDPWADevnDIDDVDRVFPGMLYTIREWFRLYKVPDgkpENQFALDERFMNAAYAMDVIYETHASWA 225
                 78*************************99999844455599*************************************************************************998855779999***************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1179.01
//
Query:       MMETSP1325-20131115|9123_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|9124_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0029   16.2   0.0     0.0029   16.2   0.0    1.0  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.029   13.8   0.0      0.032   13.7   0.0    1.1  1  PF04156.9  IncA protein
      0.069   11.5   0.0      0.076   11.4   0.0    1.0  1  PF13520.1  Amino acid permease
       0.23    9.8   1.5       0.25    9.6   1.0    1.1  1  PF00909.16 Ammonium Transporter Family


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   8.6e-07    0.0029     133     188 ..       7      62 ..       1      76 [. 0.88

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 8.6e-07
  PF07690.11 133 lGailgpllggllasslgWravFlilailsllaavlvllllprepperkrkspaee 188
                 +G++lg+++ g++a + + + + l +a+ ++ +++lv++++ +++ + k++ +++ 
  MMETSP1325-20131115|9124_1   7 MGSLLGAVVPGAIAGLSSITTACLSMALWAVAGVLLVACVMKETKEPAKTQVSRDA 62 
                 8*********************9999999999999999999999999998888776 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   9.3e-06     0.032      29      76 ..      18      66 ..       8      76 .. 0.63

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 9.3e-06
   PF04156.9 29 fasslgvlisallgivliAlgvvLl.algllllllkapvqseedekiee 76
                 +++l+++ +a+l+++l A+++vLl a ++++  + a+ q+++d++++ 
  MMETSP1325-20131115|9124_1 18 AIAGLSSITTACLSMALWAVAGVLLvACVMKETKEPAKTQVSRDARERH 66
                2446999999999999999875555055666666666666666665554 PP

>> PF13520.1  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.2e-05     0.076     187     219 ..      23      56 ..       5      60 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.2e-05
   PF13520.1 187 wpgvllgllivlwsydGfeaaanvseevkk.rdv 219
                 ++ + + l+++lw+++G+  +a+v++e k+  ++
  MMETSP1325-20131115|9124_1  23 SSITTACLSMALWAVAGVLLVACVMKETKEpAKT 56 
                 334577899******************9975344 PP

>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.0   7.3e-05      0.25     254     278 ..      14      38 ..       8      60 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 7.3e-05
                 ------------TTT---------- CS
  PF00909.16 254 lanGilAGlVAiTaacavvepwgAl 278
                 ++ G++AGl +iT+ac  +  w+  
  MMETSP1325-20131115|9124_1  14 VVPGAIAGLSSITTACLSMALWAVA 38 
                 5779**************9999743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       857  (0.0626829); expected 273.4 (0.02)
Passed bias filter:                      690  (0.0504681); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|9125_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 363.59
//
Query:       MMETSP1325-20131115|9115_1  [L=505]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.84u 0.38s 00:00:01.22 Elapsed: 00:00:00.59
# Mc/sec: 2051.12
//
Query:       MMETSP1325-20131115|9126_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 648.43
//
Query:       MMETSP1325-20131115|9127_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   11.6   3.0       0.15   11.5   2.1    1.1  1  PF06682.7  Protein of unknown function (DUF1183)
       0.51    8.7   2.9       0.53    8.6   2.0    1.0  1  PF01153.14 Glypican
        3.5    6.3   8.5        3.9    6.1   5.9    1.0  1  PF14362.1  Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> PF06682.7  Protein of unknown function (DUF1183)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.1   3.2e-05      0.15     183     232 ..       5      59 ..       1      91 [. 0.39

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.2e-05
   PF06682.7 183 vsresrseeagydsggggggGggggdlesan.......gppppyfkssfpgsaglsa 232
                 +++e+++e++  ++ggggggGg +++++ ++       g p p +++ +++     +
  MMETSP1325-20131115|9127_1   5 EEQEQEQEQEAKEEGGGGGGGGDSEEMKAKKaerakrfGLPDPNEQEAKKKA--RME 59 
                 3333444444444456666666444444444222223444444432222111..122 PP

>> PF01153.14  Glypican
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.0   0.00012      0.53     475     528 ..       8      64 ..       2      90 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00012
  PF01153.14 475 ddedeqdaedessGvsGsGsgcedkrlkilaesekdlskeeeakekqeatakd.....s 528
                 + e+eq+a++e++G+ G+G+ +e k     ae++k++   ++++++++++a+       
  MMETSP1325-20131115|9127_1   8 EQEQEQEAKEEGGGGGGGGDSEEMK--AKKAERAKRFGLPDPNEQEAKKKARMerfskP 64 
                 4556678889999988888877777..55556666666556555555544444333321 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.9   0.00086       3.9     158     233 ..       2      82 ..       1      92 [. 0.58

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00086
   PF14362.1 158 vnaaeeevqceleGtggtgvaGkGpvykekkealdaaq..aeletlkaqldaaqaelean...krkaaleeeraakvaeeq 233
                 vn++e+e ++e+e +++ g  G G  ++e k++ +++     l + ++q+++++a++e     + +a+++++r+a++a++ 
  MMETSP1325-20131115|9127_1   2 VNEEEQEQEQEQEAKEEGGGGGGGGDSEEMKAKKAERAkrFGLPDPNEQEAKKKARMERFskpAISAEEQARRDARAARFS 82 
                 678888888888888555555555555555555555441345777788888888888844666444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       745  (0.0544909); expected 273.4 (0.02)
Passed bias filter:                      411  (0.0300614); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 446.38
//
Query:       MMETSP1325-20131115|9120_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 809.97
//
Query:       MMETSP1325-20131115|9118_1  [L=780]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-40  134.0  21.8    7.9e-10   38.1   0.4    7.3  8  PF13414.1  TPR repeat
    1.5e-36  122.4  30.3    2.9e-06   26.5   0.1   11.4 11  PF00515.23 Tetratricopeptide repeat
      2e-35  117.6  22.6     0.0033   17.1   0.0   11.5 11  PF07719.12 Tetratricopeptide repeat
    7.1e-35  118.6  20.5    2.3e-09   36.9   0.1    9.3  9  PF13424.1  Tetratricopeptide repeat
    1.1e-27   95.9   0.1    0.00023   21.6   0.0    7.6  8  PF13432.1  Tetratricopeptide repeat
    5.9e-27   91.5   1.2     0.0023   18.3   0.0   11.2 12  PF13428.1  Tetratricopeptide repeat
    3.1e-21   74.1   8.9       0.16   12.3   0.0   11.0 10  PF13174.1  Tetratricopeptide repeat
    2.8e-20   70.3   7.7      0.023   14.3   0.0    9.5  9  PF13176.1  Tetratricopeptide repeat
    1.2e-19   70.1  22.6    3.9e-05   23.5   0.6    6.7  7  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    5.4e-18   63.2  23.9       0.06   13.0   0.0   11.2 11  PF13181.1  Tetratricopeptide repeat
    1.1e-13   50.0  12.8       0.27   11.4   0.1    9.8  9  PF13431.1  Tetratricopeptide repeat
    3.3e-09   36.2   9.4       0.45   10.3   0.0    9.0 10  PF13374.1  Tetratricopeptide repeat
    4.4e-08   32.7   4.9      0.014   15.1   0.1    6.7  7  PF13371.1  Tetratricopeptide repeat
     0.0001   21.9   4.8         33    4.6   0.0    7.3  8  PF01535.15 PPR repeat
     0.0006   19.2   9.3       0.87    8.9   0.2    5.4  6  PF11817.3  Foie gras liver health family 1
     0.0034   15.9   0.0     0.0034   15.9   0.0    3.1  4  PF10300.4  Protein of unknown function (DUF3808)
     0.0088   15.1   0.8        9.4    5.4   0.0    4.3  4  PF10516.4  SHNi-TPR
  ------ inclusion threshold ------
      0.012   15.2   4.8       0.18   11.3   1.0    2.6  2  PF10938.3  YfdX protein
      0.052   13.2   0.3       0.18   11.5   0.2    1.9  1  PF09345.5  Domain of unknown function (DUF1987)
      0.064   12.9   0.0        1.6    8.4   0.0    2.9  2  PF10579.4  Rapsyn N-terminal myristoylation and linker region
       0.15   11.8  29.4       0.14   11.8   0.4    7.3  7  PF07720.7  Tetratricopeptide repeat
       0.22   10.4   6.2       0.66    8.8   0.0    4.1  5  PF08631.5  Meiosis protein SPO22/ZIP4 like
       0.72    9.6  11.8         21    4.9   0.0    5.8  5  PF04212.13 MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       7.8   4.6e+03       4      18 ..     135     149 ..     127     154 .. 0.51
   2 !   38.1   0.4   1.3e-12   7.9e-10       7      66 ..     170     230 ..     165     234 .. 0.90
   3 !   17.0   0.0     5e-06     0.003       5      55 ..     243     291 ..     240     303 .. 0.80
   4 !   15.0   1.2   2.1e-05     0.012       8      65 ..     391     448 ..     384     452 .. 0.89
   5 !   35.8   0.0   6.8e-12     4e-09       2      66 ..     454     517 ..     453     520 .. 0.95
   6 !   14.9   0.0   2.3e-05     0.014      20      62 ..     506     547 ..     504     554 .. 0.92
   7 !    9.7   0.0   0.00094      0.56       5      60 ..     525     579 ..     521     588 .. 0.80
   8 !   27.2   0.0   3.2e-09   1.9e-06       9      66 ..     597     653 ..     597     656 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 7.8
   PF13414.1   4 ealkelGnalfkegd 18 
                 e++ke+G +   +++
  MMETSP1325-20131115|9118_1 135 EQAKEAGKKERALCK 149
                 334455555555555 PP

  == domain 2    score: 38.1 bits;  conditional E-value: 1.3e-12
   PF13414.1   7 kelGnalfkegdydeAieayekAlel..dpnnaelyynlAlaylklgkdyeeAledyekAle 66 
                 ++l+na+ k++ ydeAi  y+  ++    p++  l  n++ +y+++  +y +A+++y++Al 
  MMETSP1325-20131115|9118_1 170 FNLANAYHKNKMYDEAIHTYSLLVKNkqYPQSGRLRVNMGNIYYEQK-KYPQAIKMYRMALD 230
                 89**********************96337****************86.8***********95 PP

  == domain 3    score: 17.0 bits;  conditional E-value: 5e-06
   PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdye 55 
                  +++ Gna+ ++g++++Ai+ ye  ++ +  + +  +nl l+y+ lg+  +
  MMETSP1325-20131115|9118_1 243 IFRNIGNAFVRLGQFQDAIQSYETIMAGNA-DFQTGFNLVLCYYALGD-AD 291
                 5799**********************9986.56677778888888874.34 PP

  == domain 4    score: 15.0 bits;  conditional E-value: 2.1e-05
   PF13414.1   8 elGnalfkegdydeAieayekAleldpnn.aelyynlAlaylklgkdyeeAledyekAl 65 
                  ++ +++k++++ +Aie ++   + d ++ a +  nl+ +y+   ++y +A +++++A 
  MMETSP1325-20131115|9118_1 391 DMAIRYLKQKQFSQAIEVLKSFEKKDQQHrAMAATNLSFIYFLE-QEYTQAEKYADLAY 448
                 68999*********************987699***********7.58*********996 PP

  == domain 5    score: 35.8 bits;  conditional E-value: 6.8e-12
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66 
                 nA+al ++Gn+l+ +g++d A +++ +A+  + ++ e+ +nl+l+ +++g   +eA +++ek + 
  MMETSP1325-20131115|9118_1 454 NAKALVNKGNCLLLRGELDMAKQFFLEAIGVEADCVEAIFNLGLVNIRMG-SLQEAHQAFEKLHT 517
                 89************************************************.78********9876 PP

  == domain 6    score: 14.9 bits;  conditional E-value: 2.3e-05
   PF13414.1  20 deAieayekAleldpnnaelyynlAlaylklgkdyeeAledye 62 
                 +eA +a+ek   + p+n+e+ y +A +y+++g d + A++ ++
  MMETSP1325-20131115|9118_1 506 QEAHQAFEKLHTIIPHNPEVIYHIASLYEQNG-DLHNAIKWFN 547
                 79******************************.5899998765 PP

  == domain 7    score: 9.7 bits;  conditional E-value: 0.00094
   PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAled 60 
                 + +  +  + ++gd+++Ai+ ++      p+++ +++++++++ k  +d  +A ++
  MMETSP1325-20131115|9118_1 525 VIYHIASLYEQNGDLHNAIKWFNILSTRVPSDPGILARMGQIFNKE-DDESQAFHY 579
                 555667788999******************************9995.555566554 PP

  == domain 8    score: 27.2 bits;  conditional E-value: 3.2e-09
   PF13414.1   9 lGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66 
                 lG  + k   y++Ai ++e+A +++pn  +  +    +y+++  +y++Ale ye+ ++
  MMETSP1325-20131115|9118_1 597 LGVWYVKSELYEKAIHFFERASQIQPNEVKWRLMVTSCYRRMH-NYQKALELYERIHA 653
                 6888999999********************************9.7*********9876 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.6   4.4e-07   0.00026       3      24 ..     168     189 ..     166     191 .. 0.91
   2 !   26.5   0.1   4.9e-09   2.9e-06       6      30 ..     207     231 ..     203     233 .. 0.91
   3 !   16.3   0.0   7.9e-06    0.0047       3      25 ..     243     265 ..     241     267 .. 0.91
   4 ?   -2.1   0.1       5.2   3.1e+03       9      17 ..     282     290 ..     282     292 .. 0.78
   5 ?    3.7   0.1     0.077        46      11      22 ..     396     407 ..     396     410 .. 0.92
   6 ?    2.3   0.3      0.21   1.2e+02      10      28 ..     430     448 ..     425     454 .. 0.83
   7 !   19.8   0.1   6.4e-07   0.00038       1      28 [.     455     482 ..     455     488 .. 0.93
   8 !   10.4   0.0   0.00059      0.35       2      34 .]     490     522 ..     489     522 .. 0.90
   9 !    8.2   0.0     0.003       1.8       2      25 ..     524     547 ..     523     547 .. 0.90
  10 !   12.6   0.0   0.00012     0.069      11      33 ..     601     623 ..     594     624 .. 0.88
  11 !   14.1   0.2   4.1e-05     0.024      10      34 .]     634     658 ..     633     658 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 4.4e-07
                 HHHHHHHHHHHTT-HHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyy 24 
                 +++nl+nay+k+++ydeA+  y
  MMETSP1325-20131115|9118_1 168 VCFNLANAYHKNKMYDEAIHTY 189
                 789****************988 PP

  == domain 2    score: 26.5 bits;  conditional E-value: 4.9e-09
                 HHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF00515.23   6 nlGnaylklgkydeAleyyekALel 30 
                 n+Gn+y++++ky +A++ y+ AL  
  MMETSP1325-20131115|9118_1 207 NMGNIYYEQKKYPQAIKMYRMALDQ 231
                 9**********************75 PP

  == domain 3    score: 16.3 bits;  conditional E-value: 7.9e-06
                 HHHHHHHHHHHTT-HHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyye 25 
                 ++ n+Gna+ +lg++++A++ ye
  MMETSP1325-20131115|9118_1 243 IFRNIGNAFVRLGQFQDAIQSYE 265
                 677*******************8 PP

  == domain 4    score: -2.1 bits;  conditional E-value: 5.2
                 HHHHHTT-H CS
  PF00515.23   9 naylklgky 17 
                 ++y+ lg+ 
  MMETSP1325-20131115|9118_1 282 LCYYALGDA 290
                 599999985 PP

  == domain 5    score: 3.7 bits;  conditional E-value: 0.077
                 HHHTT-HHHHHH CS
  PF00515.23  11 ylklgkydeAle 22 
                 ylk++++ +A+e
  MMETSP1325-20131115|9118_1 396 YLKQKQFSQAIE 407
                 99*********8 PP

  == domain 6    score: 2.3 bits;  conditional E-value: 0.21
                 HHHHTT-HHHHHHHHHHHH CS
  PF00515.23  10 aylklgkydeAleyyekAL 28 
                 +y+  ++y +A++y + A 
  MMETSP1325-20131115|9118_1 430 IYFLEQEYTQAEKYADLAY 448
                 8************977665 PP

  == domain 7    score: 19.8 bits;  conditional E-value: 6.4e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekAL 28 
                 akal n+Gn++l  g++d A +++ +A+
  MMETSP1325-20131115|9118_1 455 AKALVNKGNCLLLRGELDMAKQFFLEAI 482
                 89*************************9 PP

  == domain 8    score: 10.4 bits;  conditional E-value: 0.00059
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALelnPnn 34 
                 +a +nlG++  ++g ++eA +++ek  ++ P+n
  MMETSP1325-20131115|9118_1 490 EAIFNLGLVNIRMGSLQEAHQAFEKLHTIIPHN 522
                 7889*********************88888876 PP

  == domain 9    score: 8.2 bits;  conditional E-value: 0.003
                 HHHHHHHHHHHHTT-HHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyye 25 
                 ++ y ++ +y ++g++  A++ ++
  MMETSP1325-20131115|9118_1 524 EVIYHIASLYEQNGDLHNAIKWFN 547
                 56799****************996 PP

  == domain 10    score: 12.6 bits;  conditional E-value: 0.00012
                 HHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  11 ylklgkydeAleyyekALelnPn 33 
                 y k + y++A+ ++e+A +++Pn
  MMETSP1325-20131115|9118_1 601 YVKSELYEKAIHFFERASQIQPN 623
                 778889****************8 PP

  == domain 11    score: 14.1 bits;  conditional E-value: 4.1e-05
                 HHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23  10 aylklgkydeAleyyekALelnPnn 34 
                 +y+++ +y++Ale ye+     P+n
  MMETSP1325-20131115|9118_1 634 CYRRMHNYQKALELYERIHAEHPEN 658
                 9***************988777765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.2   1.5e-05    0.0091       3      25 ..     168     190 ..     166     195 .. 0.89
   2 !   17.1   0.0   5.5e-06    0.0033       6      30 ..     207     231 ..     203     234 .. 0.90
   3 !   12.5   0.0   0.00016     0.095       3      26 ..     243     266 ..     241     269 .. 0.90
   4 ?   -1.8   0.1         6   3.5e+03      10      18 ..     283     291 ..     282     292 .. 0.72
   5 ?    3.8   0.0     0.097        58       7      24 ..     392     409 ..     388     417 .. 0.89
   6 ?    6.3   0.7     0.016       9.4       3      31 ..     423     451 ..     421     454 .. 0.85
   7 !   13.2   0.0   9.8e-05     0.059       1      28 [.     455     482 ..     455     484 .. 0.96
   8 !   15.7   0.0   1.5e-05    0.0088       2      34 .]     490     522 ..     489     522 .. 0.93
   9 !    8.1   0.0     0.004       2.4       1      25 [.     523     547 ..     523     549 .. 0.92
  10 !   15.4   0.0   1.9e-05     0.011       5      33 ..     595     623 ..     592     624 .. 0.93
  11 !   14.1   0.2   4.9e-05     0.029      10      34 .]     634     658 ..     633     658 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHHTT-HHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafe 25 
                 +++nl++ay k++ y+eA++ + 
  MMETSP1325-20131115|9118_1 168 VCFNLANAYHKNKMYDEAIHTYS 190
                 79*****************9885 PP

  == domain 2    score: 17.1 bits;  conditional E-value: 5.5e-06
                 HHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAlel 30 
                 n+G++yy++++y +A++ ++ Al  
  MMETSP1325-20131115|9118_1 207 NMGNIYYEQKKYPQAIKMYRMALDQ 231
                 89*******************9986 PP

  == domain 3    score: 12.5 bits;  conditional E-value: 0.00016
                 HHHHHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafek 26 
                 +  n+G+a  +lg++++A++ +e 
  MMETSP1325-20131115|9118_1 243 IFRNIGNAFVRLGQFQDAIQSYET 266
                 6789******************96 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 6
                 HHHHTT-HH CS
  PF07719.12  10 ayyklgdye 18 
                 +yy+lgd +
  MMETSP1325-20131115|9118_1 283 CYYALGDAD 291
                 788888865 PP

  == domain 5    score: 3.8 bits;  conditional E-value: 0.097
                 HHHHHHHTT-HHHHHHHH CS
  PF07719.12   7 lGlayyklgdyeeAleaf 24 
                 ++  y+k++++ +A+e +
  MMETSP1325-20131115|9118_1 392 MAIRYLKQKQFSQAIEVL 409
                 6788***********976 PP

  == domain 6    score: 6.3 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleld 31 
                 a  nl  +y+  ++y +A+++ + A  +d
  MMETSP1325-20131115|9118_1 423 AATNLSFIYFLEQEYTQAEKYADLAYTHD 451
                 56699****************99998776 PP

  == domain 7    score: 13.2 bits;  conditional E-value: 9.8e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAl 28 
                 a+al n G++++ +g+++ A+++f +A+
  MMETSP1325-20131115|9118_1 455 AKALVNKGNCLLLRGELDMAKQFFLEAI 482
                 789***********************97 PP

  == domain 8    score: 15.7 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 ea +nlGl+ +++g ++eA++afek   + P+n
  MMETSP1325-20131115|9118_1 490 EAIFNLGLVNIRMGSLQEAHQAFEKLHTIIPHN 522
                 799***********************9998876 PP

  == domain 9    score: 8.1 bits;  conditional E-value: 0.004
                 HHHHHHHHHHHHHTT-HHHHHHHHH CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafe 25 
                 +e+ y ++ +y+++gd+  A+++f+
  MMETSP1325-20131115|9118_1 523 PEVIYHIASLYEQNGDLHNAIKWFN 547
                 578899*****************96 PP

  == domain 10    score: 15.4 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   5 ynlGlayyklgdyeeAleafekAleldPn 33 
                  +lG  y k+  ye+A+++fe+A +++Pn
  MMETSP1325-20131115|9118_1 595 SWLGVWYVKSELYEKAIHFFERASQIQPN 623
                 689*************************8 PP

  == domain 11    score: 14.1 bits;  conditional E-value: 4.9e-05
                 HHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  10 ayyklgdyeeAleafekAleldPnn 34 
                 +y+++ +y++Ale++e+  +  P+n
  MMETSP1325-20131115|9118_1 634 CYRRMHNYQKALELYERIHAEHPEN 658
                 8****************99999987 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.1   3.8e-12   2.3e-09       5      74 ..     166     230 ..     162     233 .. 0.91
   2 !   13.8   0.0   6.3e-05     0.037       7      67 ..     243     295 ..     237     304 .. 0.76
   3 ?    2.0   0.0       0.3   1.8e+02      10      41 ..     279     311 ..     272     314 .. 0.66
   4 ?    6.0   0.0     0.017       9.9      35      70 ..     374     410 ..     371     411 .. 0.84
   5 !   24.1   2.3   3.8e-08   2.3e-05       2      73 ..     418     482 ..     417     485 .. 0.89
   6 !   11.0   0.0   0.00045      0.27      43      75 ..     486     518 ..     483     521 .. 0.92
   7 !    9.4   0.0    0.0015      0.86       9      74 ..     527     585 ..     519     588 .. 0.77
   8 !   18.2   0.2   2.7e-06    0.0016      11      72 ..     597     651 ..     589     653 .. 0.88
   9 !   12.7   0.3   0.00014     0.081      14      61 ..     634     674 ..     630     677 .. 0.70

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 3.8e-12
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                  ++ +nla+++++ ++ydeA+  y   ++         p+  r+  n++n+y+++++y +A+++++ Al+
  MMETSP1325-20131115|9118_1 166 YAVCFNLANAYHKNKMYDEAIHTYSLLVKNK-----QYPQSGRLRVNMGNIYYEQKKYPQAIKMYRMALD 230
                 45668***********************995.....47899***************************98 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 6.3e-05
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAle 67 
                 i  n+++++ rlg++++A++ ye+ ++     g+++ +t    +nl  +y+algd d+ ++
  MMETSP1325-20131115|9118_1 243 IFRNIGNAFVRLGQFQDAIQSYETIMA-----GNADFQTG---FNLVLCYYALGDADKMKR 295
                 66799***99*********99999995.....55565555...777777777777777665 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.3
   PF13424.1  10 nlalvlrrlgdydeAlelyekalel.lrelgdd 41 
                 nl l++++lgd d+    + k l + +  +gd+
  MMETSP1325-20131115|9118_1 279 NLVLCYYALGDADKMKRGFAKLLSIpIPGMGDE 311
                 666777777777776666666666666666655 PP

  == domain 4    score: 6.0 bits;  conditional E-value: 0.017
   PF13424.1  35 lrelgddhpdta.ralnnlanlylalgdydeAleyle 70 
                 + +l++dh d+a  +  ++a+ yl+++++++A+e l+
  MMETSP1325-20131115|9118_1 374 IDVLKPDHEDLAsELEIDMAIRYLKQKQFSQAIEVLK 410
                 67889999999955559***************99986 PP

  == domain 5    score: 24.1 bits;  conditional E-value: 3.8e-08
   PF13424.1   2 pdlatilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAl 73 
                 ++ a++ +nl  +++ +++y +A+++   a +       d ++ a+al n +n++l +g++d A++++ +A+
  MMETSP1325-20131115|9118_1 418 QHRAMAATNLSFIYFLEQEYTQAEKYADLAYTH------DRYN-AKALVNKGNCLLLRGELDMAKQFFLEAI 482
                 5679999*******************9999744......4455.**************************98 PP

  == domain 6    score: 11.0 bits;  conditional E-value: 0.00045
   PF13424.1  43 pdtaralnnlanlylalgdydeAleylekAlei 75 
                 +d++ a +nl+ +  ++g ++eA + +ek ++i
  MMETSP1325-20131115|9118_1 486 ADCVEAIFNLGLVNIRMGSLQEAHQAFEKLHTI 518
                 68999************************8876 PP

  == domain 7    score: 9.4 bits;  conditional E-value: 0.0015
   PF13424.1   9 nnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                 + +a ++++ gd++ A+++++   +    ++ d++    +l  +++++++  d ++A  y+ ++++
  MMETSP1325-20131115|9118_1 527 YHIASLYEQNGDLHNAIKWFNILSTR---VPSDPG----ILARMGQIFNKEDDESQAFHYHLESYR 585
                 689****************9987765...444443....566888888888888888888888776 PP

  == domain 8    score: 18.2 bits;  conditional E-value: 2.7e-06
   PF13424.1  11 lalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekA 72 
                 l+  + + + y++A+ ++e+a +++       p+ ++  +    +y+++ +y++Ale++e+ 
  MMETSP1325-20131115|9118_1 597 LGVWYVKSELYEKAIHFFERASQIQ-------PNEVKWRLMVTSCYRRMHNYQKALELYERI 651
                 78889999****************7.......44488899999*****************96 PP

  == domain 9    score: 12.7 bits;  conditional E-value: 0.00014
   PF13424.1  14 vlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgd 61 
                 ++rr+++y++Alelye+        + +hp+ + +l+ l  ++  lg+
  MMETSP1325-20131115|9118_1 634 CYRRMHNYQKALELYERI-------HAEHPENLECLRYLVAICKDLGR 674
                 677777777777776665.......56677777777777777777776 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   3.9e-07   0.00023       2      60 ..     171     231 ..     170     235 .. 0.93
   2 !   11.3   0.0   0.00066      0.39       4      48 ..     248     291 ..     246     297 .. 0.82
   3 !   17.6   0.5   6.7e-06     0.004       2      63 ..     391     453 ..     390     455 .. 0.92
   4 !   10.4   0.0    0.0013      0.75       8      56 ..     466     514 ..     460     517 .. 0.89
   5 !   11.2   0.0   0.00071      0.42      18      65 .]     507     557 ..     506     557 .. 0.93
   6 ?    4.1   0.0      0.12        71      25      63 ..     585     623 ..     576     625 .. 0.86
   7 !   16.5   0.0   1.5e-05    0.0091      12      63 ..     606     657 ..     597     659 .. 0.93
   8 !   11.0   0.1   0.00079      0.47       9      48 ..     637     676 ..     635     678 .. 0.91

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 3.9e-07
   PF13432.1   2 alArallraGdydeAlaaleaalala..PeaaeallllaeallrlgrldeAaallraalal 60 
                  lA+a+ +++ ydeA++ ++ ++++   P+  + + + + ++++++++++A++ +r al+ 
  MMETSP1325-20131115|9118_1 171 NLANAYHKNKMYDEAIHTYSLLVKNKqyPQSGRLRVNMGNIYYEQKKYPQAIKMYRMALDQ 231
                 68999999999***********************************************976 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00066
   PF13432.1   4 ArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrld 48 
                 ++a++r+G++++A++ +e+++a +  + +  ++l  ++++lg+ d
  MMETSP1325-20131115|9118_1 248 GNAFVRLGQFQDAIQSYETIMAGNA-DFQTGFNLVLCYYALGDAD 291
                 899*********************6.6667777777777766654 PP

  == domain 3    score: 17.6 bits;  conditional E-value: 6.7e-06
   PF13432.1   2 alArallraGdydeAlaaleaalala.PeaaeallllaeallrlgrldeAaallraalalaPd 63 
                 + A  +l+++++ +A+++l+ + +++  + a a  +l  +++   ++ +A+++ + a+  + +
  MMETSP1325-20131115|9118_1 391 DMAIRYLKQKQFSQAIEVLKSFEKKDqQHRAMAATNLSFIYFLEQEYTQAEKYADLAYTHDRY 453
                 67999*********************999**********************999999876655 PP

  == domain 4    score: 10.4 bits;  conditional E-value: 0.0013
   PF13432.1   8 lraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallra 56 
                 l +G++d A + + +a+  + +++ea ++l+ +  r+g l+eA +++++
  MMETSP1325-20131115|9118_1 466 LLRGELDMAKQFFLEAIGVEADCVEAIFNLGLVNIRMGSLQEAHQAFEK 514
                 667889999999*******************************877776 PP

  == domain 5    score: 11.2 bits;  conditional E-value: 0.00071
   PF13432.1  18 aaleaalala...PeaaeallllaeallrlgrldeAaallraalalaPddp 65 
                 +a++a+ +l+   P+++e+ +  a ++ + g+l  A+++++ +  + P+dp
  MMETSP1325-20131115|9118_1 507 EAHQAFEKLHtiiPHNPEVIYHIASLYEQNGDLHNAIKWFNILSTRVPSDP 557
                 7999************************************99988888876 PP

  == domain 6    score: 4.1 bits;  conditional E-value: 0.12
   PF13432.1  25 alaPeaaeallllaeallrlgrldeAaallraalalaPd 63 
                 + +P   ++  +l++ + +   +++A+ ++++a ++ P+
  MMETSP1325-20131115|9118_1 585 RHYPVSLDVISWLGVWYVKSELYEKAIHFFERASQIQPN 623
                 4569999999**********************9888876 PP

  == domain 7    score: 16.5 bits;  conditional E-value: 1.5e-05
   PF13432.1  12 dydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPd 63 
                  y++A++ +e+a   +P  +  +l    ++ r+ ++++A++l++++ a+ P 
  MMETSP1325-20131115|9118_1 606 LYEKAIHFFERASQIQPNEVKWRLMVTSCYRRMHNYQKALELYERIHAEHPE 657
                 59*******************************************9999886 PP

  == domain 8    score: 11.0 bits;  conditional E-value: 0.00079
   PF13432.1   9 raGdydeAlaaleaalalaPeaaeallllaeallrlgrld 48 
                 r  +y++Al+++e++ a++Pe+ e l +l  ++ +lgr+ 
  MMETSP1325-20131115|9118_1 637 RMHNYQKALELYERIHAEHPENLECLRYLVAICKDLGRPY 676
                 6679*****************************9999975 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.22   1.3e+02       6      42 ..     171     209 ..     167     211 .. 0.84
   2 !    8.7   0.0    0.0046       2.7       3      32 ..     204     233 ..     202     238 .. 0.91
   3 !    9.9   0.0    0.0019       1.1       6      31 ..     246     271 ..     241     282 .. 0.82
   4 ?   -0.9   0.0       5.6   3.3e+03       7      29 ..     280     302 ..     274     304 .. 0.84
   5 !    8.4   0.0    0.0055       3.3       5      39 ..     390     425 ..     386     430 .. 0.79
   6 ?    0.6   0.1       1.8   1.1e+03       6      40 ..     426     460 ..     421     464 .. 0.81
   7 ?   -1.4   0.0       7.9   4.7e+03       4      28 ..     458     482 ..     455     486 .. 0.79
   8 !   10.7   0.0     0.001      0.62       2      42 ..     490     530 ..     489     532 .. 0.90
   9 !   14.8   0.0   4.8e-05     0.029       2      44 .]     524     566 ..     523     566 .. 0.93
  10 ?    4.9   0.0     0.079        47       6      40 ..     596     630 ..     591     634 .. 0.86
  11 !   18.3   0.0   3.8e-06    0.0023       9      43 ..     633     667 ..     625     668 .. 0.88
  12 ?    0.2   0.1       2.6   1.5e+03       6      23 ..     727     744 ..     725     758 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.22
   PF13428.1   6 alarallalGdpdeAiallrrala..laPddaealllLa 42 
                  la+a+  +  +deAi  +  +++  ++P++ +++ +++
  MMETSP1325-20131115|9118_1 171 NLANAYHKNKMYDEAIHTYSLLVKnkQYPQSGRLRVNMG 209
                 69***************9999997557888888877765 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0046
   PF13428.1   3 allalarallalGdpdeAiallrralalaP 32 
                 ++  +++++ ++  + +Ai+++r al + P
  MMETSP1325-20131115|9118_1 204 LRVNMGNIYYEQKKYPQAIKMYRMALDQIP 233
                 567899********************9987 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.0019
   PF13428.1   6 alarallalGdpdeAiallrralala 31 
                   ++a+ +lG++++Ai+ ++ + a +
  MMETSP1325-20131115|9118_1 246 NIGNAFVRLGQFQDAIQSYETIMAGN 271
                 5789****************987655 PP

  == domain 4    score: -0.9 bits;  conditional E-value: 5.6
   PF13428.1   7 larallalGdpdeAiallrrala 29 
                 l+  + alGd d+  + + ++l+
  MMETSP1325-20131115|9118_1 280 LVLCYYALGDADKMKRGFAKLLS 302
                 677899******99998888875 PP

  == domain 5    score: 8.4 bits;  conditional E-value: 0.0055
   PF13428.1   5 lalarallalGdpdeAiallrralalaPdd.aeall 39 
                  ++a+ +l + ++ +Ai++l+   +++ ++ a a +
  MMETSP1325-20131115|9118_1 390 IDMAIRYLKQKQFSQAIEVLKSFEKKDQQHrAMAAT 425
                 57999******************9998765144555 PP

  == domain 6    score: 0.6 bits;  conditional E-value: 1.8
   PF13428.1   6 alarallalGdpdeAiallrralalaPddaealll 40 
                  l  +++  +++ +A+++++ a  ++  +a al +
  MMETSP1325-20131115|9118_1 426 NLSFIYFLEQEYTQAEKYADLAYTHDRYNAKALVN 460
                 56778888999********9999999998888765 PP

  == domain 7    score: -1.4 bits;  conditional E-value: 7.9
   PF13428.1   4 llalarallalGdpdeAiallrral 28 
                 l   ++ ll +G++d A + + +a+
  MMETSP1325-20131115|9118_1 458 LVNKGNCLLLRGELDMAKQFFLEAI 482
                 55567778899******99998885 PP

  == domain 8    score: 10.7 bits;  conditional E-value: 0.001
   PF13428.1   2 eallalarallalGdpdeAiallrralalaPddaealllLa 42 
                 ea   l+ + +++G ++eA ++++++    P+++e+ ++ a
  MMETSP1325-20131115|9118_1 490 EAIFNLGLVNIRMGSLQEAHQAFEKLHTIIPHNPEVIYHIA 530
                 788999****************************9987655 PP

  == domain 9    score: 14.8 bits;  conditional E-value: 4.8e-05
   PF13428.1   2 eallalarallalGdpdeAiallrralalaPddaealllLarl 44 
                 e+ +  a +++++Gd+  Ai++++ +  + P+d+ +l +++++
  MMETSP1325-20131115|9118_1 524 EVIYHIASLYEQNGDLHNAIKWFNILSTRVPSDPGILARMGQI 566
                 6778899*********************************996 PP

  == domain 10    score: 4.9 bits;  conditional E-value: 0.079
   PF13428.1   6 alarallalGdpdeAiallrralalaPddaealll 40 
                  l+  +  ++ +++Ai  ++ra + +P++   +l+
  MMETSP1325-20131115|9118_1 596 WLGVWYVKSELYEKAIHFFERASQIQPNEVKWRLM 630
                 688899999******************98777765 PP

  == domain 11    score: 18.3 bits;  conditional E-value: 3.8e-06
   PF13428.1   9 rallalGdpdeAiallrralalaPddaealllLar 43 
                   +++++++++A++l++r+ a +P+++e l++L +
  MMETSP1325-20131115|9118_1 633 SCYRRMHNYQKALELYERIHAEHPENLECLRYLVA 667
                 5699************************9999975 PP

  == domain 12    score: 0.2 bits;  conditional E-value: 2.6
   PF13428.1   6 alarallalGdpdeAial 23 
                 al+r++++ ++p++A+++
  MMETSP1325-20131115|9118_1 727 ALGRVQEDDERPKRAMQA 744
                 799************997 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0023       1.4       4      29 ..     170     195 ..     166     201 .. 0.88
   2 !   12.3   0.0   0.00027      0.16       5      29 ..     207     231 ..     204     233 .. 0.91
   3 ?    5.0   0.0     0.061        36       5      26 ..     246     267 ..     244     269 .. 0.90
   4 ?    7.3   0.0     0.011       6.3       4      27 ..     278     301 ..     277     303 .. 0.91
   5 ?    4.9   0.1     0.063        38       7      28 ..     393     414 ..     391     416 .. 0.83
   6 ?   -0.1   0.0       2.4   1.5e+03       2      23 ..     457     478 ..     456     482 .. 0.85
   7 ?    4.8   0.0     0.067        40       1      26 [.     490     515 ..     490     518 .. 0.93
   8 !    9.5   0.0    0.0021       1.2       2      31 ..     525     554 ..     524     556 .. 0.88
   9 ?    2.3   0.0      0.43   2.5e+02       5      32 ..     596     623 ..     592     624 .. 0.87
  10 !   10.2   0.0    0.0012      0.74       9      32 ..     634     657 ..     628     658 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyklgdtdeAlealerlike 29 
                 ++la +y k++++deA+ ++  l+k+
  MMETSP1325-20131115|9118_1 170 FNLANAYHKNKMYDEAIHTYSLLVKN 195
                 89*******99**********99997 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.00027
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealerlike 29 
                 +++ +yy+++++ +A+++++  +++
  MMETSP1325-20131115|9118_1 207 NMGNIYYEQKKYPQAIKMYRMALDQ 231
                 89******************98875 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.061
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealerl 26 
                 +++ ++ +lg++++A++ +e +
  MMETSP1325-20131115|9118_1 246 NIGNAFVRLGQFQDAIQSYETI 267
                 7899****99*********975 PP

  == domain 4    score: 7.3 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   4 yklalsyyklgdtdeAlealerli 27 
                 ++l l+yy+lgd+d+ ++ + +l+
  MMETSP1325-20131115|9118_1 278 FNLVLCYYALGDADKMKRGFAKLL 301
                 68889****99*******999998 PP

  == domain 5    score: 4.9 bits;  conditional E-value: 0.063
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   7 alsyyklgdtdeAlealerlik 28 
                 a  y+k++++++A+e+l+ + k
  MMETSP1325-20131115|9118_1 393 AIRYLKQKQFSQAIEVLKSFEK 414
                 56688999*********99865 PP

  == domain 6    score: -0.1 bits;  conditional E-value: 2.4
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   2 AlyklalsyyklgdtdeAleal 23 
                 Al + + +++  g+ d A++ +
  MMETSP1325-20131115|9118_1 457 ALVNKGNCLLLRGELDMAKQFF 478
                 99999*****988***9*9987 PP

  == domain 7    score: 4.8 bits;  conditional E-value: 0.067
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   1 dAlyklalsyyklgdtdeAlealerl 26 
                 +A ++l+l+ +++g  +eA +a+e+l
  MMETSP1325-20131115|9118_1 490 EAIFNLGLVNIRMGSLQEAHQAFEKL 515
                 799*********99**********98 PP

  == domain 8    score: 9.5 bits;  conditional E-value: 0.0021
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
   PF13174.1   2 AlyklalsyyklgdtdeAlealerlikeyP 31 
                 + y++a +y+++gd  +A++ ++ l ++ P
  MMETSP1325-20131115|9118_1 525 VIYHIASLYEQNGDLHNAIKWFNILSTRVP 554
                 67*********99*********99988766 PP

  == domain 9    score: 2.3 bits;  conditional E-value: 0.43
                 HHHHHHHH.HHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   5 klalsyyk.lgdtdeAlealerlikeyPd 32 
                 +l+  y k    +++A+  +er  +  P+
  MMETSP1325-20131115|9118_1 596 WLGVWYVKsE-LYEKAIHFFERASQIQPN 623
                 89999**966.***********9998887 PP

  == domain 10    score: 10.2 bits;  conditional E-value: 0.0012
                 HHHH.HHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   9 syyk.lgdtdeAlealerlikeyPd 32 
                 +y++   ++++Ale++er+ +e+P+
  MMETSP1325-20131115|9118_1 634 CYRRmH-NYQKALELYERIHAEHPE 657
                 899955.*****************7 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0022       1.3       2      22 ..     169     189 ..     168     196 .. 0.93
   2 !   12.4   0.0   0.00016     0.096       3      29 ..     206     230 ..     204     237 .. 0.87
   3 !   14.3   0.0   3.9e-05     0.023       4      25 ..     246     267 ..     244     275 .. 0.88
   4 ?    0.3   0.0       1.2   6.9e+02       9      23 ..     396     410 ..     389     417 .. 0.68
   5 ?    0.1   0.2       1.4   8.2e+02       4      21 ..     426     443 ..     423     455 .. 0.85
   6 ?   -1.2   0.0       3.6   2.2e+03       1      28 [.     457     484 ..     457     487 .. 0.84
   7 ?    6.0   0.0     0.017        10       3      24 ..     527     548 ..     525     561 .. 0.78
   8 !   10.2   0.0   0.00082      0.48       5      29 ..     597     619 ..     597     626 .. 0.84
   9 !   10.0   0.0   0.00096      0.57       7      24 ..     633     650 ..     630     673 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0022
   PF13176.1   2 llnLarlysrlgdyekAiely 22 
                 ++nLa++y +   y++Ai  y
  MMETSP1325-20131115|9118_1 169 CFNLANAYHKNKMYDEAIHTY 189
                 89****************877 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 0.00016
   PF13176.1   3 lnLarlysrlgdyekAielyeraLalt 29 
                 +n++++y ++ +y +Ai++y+   al+
  MMETSP1325-20131115|9118_1 206 VNMGNIYYEQKKYPQAIKMYRM--ALD 230
                 69*******************9..555 PP

  == domain 3    score: 14.3 bits;  conditional E-value: 3.9e-05
   PF13176.1   4 nLarlysrlgdyekAielyera 25 
                 n++++++rlg++++Ai+ ye  
  MMETSP1325-20131115|9118_1 246 NIGNAFVRLGQFQDAIQSYETI 267
                 9*******************84 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 1.2
   PF13176.1   9 ysrlgdyekAielye 23 
                 y ++ ++++Aie+++
  MMETSP1325-20131115|9118_1 396 YLKQKQFSQAIEVLK 410
                 455666667776665 PP

  == domain 5    score: 0.1 bits;  conditional E-value: 1.4
   PF13176.1   4 nLarlysrlgdyekAiel 21 
                 nL  +y+  ++y +A+++
  MMETSP1325-20131115|9118_1 426 NLSFIYFLEQEYTQAEKY 443
                 666699999******998 PP

  == domain 6    score: -1.2 bits;  conditional E-value: 3.6
   PF13176.1   1 allnLarlysrlgdyekAielyeraLal 28 
                 al+n +++   +g+ + A +++ +a+++
  MMETSP1325-20131115|9118_1 457 ALVNKGNCLLLRGELDMAKQFFLEAIGV 484
                 78999999999*******9999996554 PP

  == domain 7    score: 6.0 bits;  conditional E-value: 0.017
   PF13176.1   3 lnLarlysrlgdyekAielyer 24 
                 + +a+ly++ gd  +Ai+ +  
  MMETSP1325-20131115|9118_1 527 YHIASLYEQNGDLHNAIKWFNI 548
                 679**************98766 PP

  == domain 8    score: 10.2 bits;  conditional E-value: 0.00082
   PF13176.1   5 LarlysrlgdyekAielyeraLalt 29 
                 L++ y+++  yekAi ++er  a  
  MMETSP1325-20131115|9118_1 597 LGVWYVKSELYEKAIHFFER--ASQ 619
                 899*****************..544 PP

  == domain 9    score: 10.0 bits;  conditional E-value: 0.00096
   PF13176.1   7 rlysrlgdyekAielyer 24 
                 ++y+r+ +y+kA+elyer
  MMETSP1325-20131115|9118_1 633 SCYRRMHNYQKALELYER 650
                 5799999**********9 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   1.8   8.8e-06    0.0052      26      82 ..     167     226 ..     127     228 .. 0.76
   2 !   20.1   0.1     8e-07   0.00048       3      83 ..     180     266 ..     179     267 .. 0.79
   3 ?    2.9   0.0      0.19   1.1e+02       3      42 ..     255     291 ..     253     295 .. 0.76
   4 !    7.5   0.0    0.0066       3.9      31      61 ..     392     420 ..     378     430 .. 0.76
   5 !   18.9   1.2   1.8e-06    0.0011       3      83 ..     435     514 ..     434     515 .. 0.87
   6 !   12.3   0.0   0.00022      0.13       4      49 ..     504     547 ..     501     563 .. 0.80
   7 !   23.5   0.6   6.6e-08   3.9e-05       3      75 ..     605     677 ..     603     681 .. 0.83

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 8.8e-06
                 HCHHHHHHHHHH---HHHHHHHHHC...TSHCHCBHHHHHHH.HHHHHHTT-HHHHCCCHH CS
   PF12895.2  26 aylyalAlclylngeykrAyellrk...leldssslgcryll.ArcllklgkydeAiavLe 82 
                 a+ ++lA+++ +n+ y++A++ ++    +++ ++s g   +  +  +++++ky +Ai+ + 
  MMETSP1325-20131115|9118_1 167 AVCFNLANAYHKNKMYDEAIHTYSLlvkNKQYPQS-GRLRVNmGNIYYEQKKYPQAIKMYR 226
                 366789***************99668877777788.5555555**************9986 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 8e-07
                 T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.....TSHCHCB....HHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.....leldsss....lgcryllArcllklgkydeAiavLek 83 
                 ++y++A+  + +l++  +  ++    +++++ +y++++y +A++ +r          ++     +++   ++ +++ lg++++Ai+ +e 
  MMETSP1325-20131115|9118_1 180 KMYDEAIHTYSLLVKNKQYPQSGRLRVNMGNIYYEQKKYPQAIKMYRMaldqiP---PTGkeirFKIFRNIGNAFVRLGQFQDAIQSYET 266
                 78**************9864477788999*****************88964441...233222245555889**************9985 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.19
                 T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HH CS
   PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeyk 42 
                 +++++A+  +e ++a +    +    ++l lc+y +g+ +
  MMETSP1325-20131115|9118_1 255 GQFQDAIQSYETIMAGNA---DFQTGFNLVLCYYALGDAD 291
                 688999999999999976...4455555589999999865 PP

  == domain 4    score: 7.5 bits;  conditional E-value: 0.0066
                 HHHHHHH---HHHHHHHHHC.TSHCHCBHHHH CS
   PF12895.2  31 lAlclylngeykrAyellrk.leldssslgcr 61 
                 +A  +++++++ +A+e+l+  ++ d ++   r
  MMETSP1325-20131115|9118_1 392 MAIRYLKQKQFSQAIEVLKSfEKKDQQH---R 420
                 566799************6665555555...3 PP

  == domain 5    score: 18.9 bits;  conditional E-value: 1.8e-06
                 T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83 
                 ++y +A+++a+++++ +    ++ +l+++++cl+l ge + A +++ +   +++  +++ + l+ + + +g ++eA +++ek
  MMETSP1325-20131115|9118_1 435 QEYTQAEKYADLAYTHDR--YNAKALVNKGNCLLLRGELDMAKQFFLEaIGVEADCVEAIFNLGLVNIRMGSLQEAHQAFEK 514
                 6899************85..5899******************8888556666666677778889***************998 PP

  == domain 6    score: 12.3 bits;  conditional E-value: 0.00022
                 -HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHH CS
   PF12895.2   4 nyknAlflaekllaespkdpedaylyalAlclylngeykrAyellr 49 
                   ++A   +ekl++  p++pe  ++y +A  + +ng+ + A+++++
  MMETSP1325-20131115|9118_1 504 SLQEAHQAFEKLHTIIPHNPE--VIYHIASLYEQNGDLHNAIKWFN 547
                 56889999*******996655..55555***************993 PP

  == domain 7    score: 23.5 bits;  conditional E-value: 6.6e-08
                 T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-.HH CS
   PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgk.yd 75 
                 + y++A+ ++e++ + +p++ +   ++    c+ ++ +y++A+el+++ +   +++l+c   l   + +lg+ yd
  MMETSP1325-20131115|9118_1 605 ELYEKAIHFFERASQIQPNEVKWRLMV--TSCYRRMHNYQKALELYERiHAEHPENLECLRYLVAICKDLGRpYD 677
                 68***************9532444555..*****************99766666999**9999888888888665 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.2   0.00073      0.43       2      24 ..     167     189 ..     166     197 .. 0.87
   2 !    8.9   0.1     0.002       1.2       2      28 ..     203     229 ..     202     231 .. 0.88
   3 !    7.9   0.0    0.0041       2.5       3      26 ..     243     266 ..     241     269 .. 0.90
   4 ?    5.2   0.0      0.03        18       5      30 ..     278     303 ..     278     304 .. 0.87
   5 ?   -0.3   0.1       1.8   1.1e+03      11      25 ..     396     410 ..     394     417 .. 0.90
   6 ?    0.2   0.3       1.3   7.5e+02       5      27 ..     425     447 ..     423     454 .. 0.82
   7 !    9.9   0.0   0.00097      0.58       1      29 [.     455     483 ..     455     488 .. 0.92
   8 ?    2.6   0.0      0.21   1.3e+02       3      26 ..     491     514 ..     489     518 .. 0.92
   9 !   13.0   0.0    0.0001      0.06       3      25 ..     525     547 ..     523     549 .. 0.91
  10 ?    4.9   0.0     0.038        23      16      33 ..     606     623 ..     597     624 .. 0.85
  11 ?    5.0   0.1     0.036        22      10      26 ..     634     650 ..     633     651 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00073
                 --TTT---HHHHTT-HHHHHHHH CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeyl 24 
                 ++++nl+ +Y +++ yd+A+  +
  MMETSP1325-20131115|9118_1 167 AVCFNLANAYHKNKMYDEAIHTY 189
                 689****************9877 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.002
                 --TTT---HHHHTT-HHHHHHHHH--- CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekal 28 
                 +++ n+G iY + ++y +A++ ++ al
  MMETSP1325-20131115|9118_1 203 RLRVNMGNIYYEQKKYPQAIKMYRMAL 229
                 5789*****************998665 PP

  == domain 3    score: 7.9 bits;  conditional E-value: 0.0041
                 -TTT---HHHHTT-HHHHHHHHH- CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylek 26 
                 + +n+G ++  lG++  A++++e 
  MMETSP1325-20131115|9118_1 243 IFRNIGNAFVRLGQFQDAIQSYET 266
                 678*******************96 PP

  == domain 4    score: 5.2 bits;  conditional E-value: 0.03
                 TT---HHHHTT-HHHHHHHHH---HH CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeylekalel 30 
                 +nl ++Y  lGd dk k  + k l++
  MMETSP1325-20131115|9118_1 278 FNLVLCYYALGDADKMKRGFAKLLSI 303
                 57889***********9999888876 PP

  == domain 5    score: -0.3 bits;  conditional E-value: 1.8
                 HHHTT-HHHHHHHHH CS
   PF13181.1  11 YrqlGdydkAkeyle 25 
                 Y++ +++++A+e l+
  MMETSP1325-20131115|9118_1 396 YLKQKQFSQAIEVLK 410
                 8999*******9987 PP

  == domain 6    score: 0.2 bits;  conditional E-value: 1.3
                 TT---HHHHTT-HHHHHHHHH-- CS
   PF13181.1   5 ynlGdiYrqlGdydkAkeyleka 27 
                 +nl+ iY+   +y +A++y   a
  MMETSP1325-20131115|9118_1 425 TNLSFIYFLEQEYTQAEKYADLA 447
                 58999*************96655 PP

  == domain 7    score: 9.9 bits;  conditional E-value: 0.00097
                 ---TTT---HHHHTT-HHHHHHHHH---H CS
   PF13181.1   1 akayynlGdiYrqlGdydkAkeylekale 29 
                 aka+ n+G +++  G+ d Ak+++ +a+ 
  MMETSP1325-20131115|9118_1 455 AKALVNKGNCLLLRGELDMAKQFFLEAIG 483
                 589************************85 PP

  == domain 8    score: 2.6 bits;  conditional E-value: 0.21
                 -TTT---HHHHTT-HHHHHHHHH- CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylek 26 
                 a +nlG++   +G   +A +++ek
  MMETSP1325-20131115|9118_1 491 AIFNLGLVNIRMGSLQEAHQAFEK 514
                 679*******************98 PP

  == domain 9    score: 13.0 bits;  conditional E-value: 0.0001
                 -TTT---HHHHTT-HHHHHHHHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeyle 25 
                 + y ++++Y+q+Gd ++A++ ++
  MMETSP1325-20131115|9118_1 525 VIYHIASLYEQNGDLHNAIKWFN 547
                 5699****************997 PP

  == domain 10    score: 4.9 bits;  conditional E-value: 0.038
                 -HHHHHHHHH---HHHH. CS
   PF13181.1  16 dydkAkeylekalelkpr 33 
                  y+kA+ ++e+a ++ p+
  MMETSP1325-20131115|9118_1 606 LYEKAIHFFERASQIQPN 623
                 59************9996 PP

  == domain 11    score: 5.0 bits;  conditional E-value: 0.036
                 HHHHTT-HHHHHHHHH- CS
   PF13181.1  10 iYrqlGdydkAkeylek 26 
                 +Yr + +y kA+e +e+
  MMETSP1325-20131115|9118_1 634 CYRRMHNYQKALELYER 650
                 9*************997 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.1    0.0056       3.3      17      33 ..     170     186 ..     166     187 .. 0.92
   2 !    8.4   0.1     0.004       2.4       8      34 .]     197     223 ..     195     223 .. 0.91
   3 ?    4.9   0.0     0.054        32      15      34 .]     243     262 ..     240     262 .. 0.90
   4 ?   -1.0   0.0       4.2   2.5e+03      17      31 ..     278     292 ..     272     295 .. 0.84
   5 ?    2.4   0.0      0.33     2e+02      11      34 .]     419     442 ..     409     442 .. 0.86
   6 !   11.4   0.1   0.00045      0.27      11      34 .]     453     476 ..     447     476 .. 0.92
   7 ?    3.9   0.0      0.11        65      13      34 .]     489     510 ..     477     510 .. 0.87
   8 !    7.6   0.0    0.0072       4.3      10      33 ..     520     543 ..     514     544 .. 0.93
   9 ?    0.5   0.0       1.4   8.5e+02       2       8 ..     641     647 ..     613     675 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0056
   PF13431.1  17 nnLAelllnnGdleeAe 33 
                 +nLA+++++n+ ++eA+
  MMETSP1325-20131115|9118_1 170 FNLANAYHKNKMYDEAI 186
                 8**************97 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.004
   PF13431.1   8 ldPnnadaynnLAelllnnGdleeAeq 34 
                 ++P +  ++ n+++++++++++ +A++
  MMETSP1325-20131115|9118_1 197 QYPQSGRLRVNMGNIYYEQKKYPQAIK 223
                 6799999***************99985 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.054
   PF13431.1  15 aynnLAelllnnGdleeAeq 34 
                  ++n ++++ ++G++++A+q
  MMETSP1325-20131115|9118_1 243 IFRNIGNAFVRLGQFQDAIQ 262
                 5789**************98 PP

  == domain 4    score: -1.0 bits;  conditional E-value: 4.2
   PF13431.1  17 nnLAelllnnGdlee 31 
                 +nL ++++++Gd ++
  MMETSP1325-20131115|9118_1 278 FNLVLCYYALGDADK 292
                 678889999999886 PP

  == domain 5    score: 2.4 bits;  conditional E-value: 0.33
   PF13431.1  11 nnadaynnLAelllnnGdleeAeq 34 
                   a+a +nL  +++  +++ +Ae+
  MMETSP1325-20131115|9118_1 419 HRAMAATNLSFIYFLEQEYTQAEK 442
                 569999**************9985 PP

  == domain 6    score: 11.4 bits;  conditional E-value: 0.00045
   PF13431.1  11 nnadaynnLAelllnnGdleeAeq 34 
                  na a+ n++++ll +G+l++A+q
  MMETSP1325-20131115|9118_1 453 YNAKALVNKGNCLLLRGELDMAKQ 476
                 69********************97 PP

  == domain 7    score: 3.9 bits;  conditional E-value: 0.11
   PF13431.1  13 adaynnLAelllnnGdleeAeq 34 
                 ++a +nL+++  + G l+eA+q
  MMETSP1325-20131115|9118_1 489 VEAIFNLGLVNIRMGSLQEAHQ 510
                 6899****************97 PP

  == domain 8    score: 7.6 bits;  conditional E-value: 0.0072
   PF13431.1  10 PnnadaynnLAelllnnGdleeAe 33 
                 P n+++ +  A l+  nGdl  A+
  MMETSP1325-20131115|9118_1 520 PHNPEVIYHIASLYEQNGDLHNAI 543
                 99*****************99887 PP

  == domain 9    score: 0.5 bits;  conditional E-value: 1.4
   PF13431.1   2 yekalel 8  
                 y+kalel
  MMETSP1325-20131115|9118_1 641 YQKALEL 647
                 5555555 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.79   4.7e+02       7      21 ..     171     185 ..     167     187 .. 0.88
   2 !   10.3   0.0   0.00076      0.45       6      29 ..     206     229 ..     203     230 .. 0.91
   3 ?    4.7   0.0     0.044        26       7      29 ..     246     268 ..     244     271 .. 0.87
   4 ?   -1.4   0.0       3.7   2.2e+03       7      20 ..     279     292 ..     279     295 .. 0.88
   5 ?   -1.5   0.0         4   2.4e+03       8      23 ..     392     407 ..     391     410 .. 0.85
   6 ?    4.3   0.2     0.058        35       2      25 ..     421     444 ..     420     451 .. 0.91
   7 ?   -1.1   0.0       2.9   1.7e+03       3      28 ..     456     481 ..     455     483 .. 0.87
   8 ?   -0.1   0.0       1.5   8.8e+02       7      30 ..     494     517 ..     490     518 .. 0.86
   9 ?   -0.6   0.0         2   1.2e+03       6      31 ..     595     620 ..     591     621 .. 0.84
  10 !    9.2   0.0    0.0017         1      11      29 ..     634     652 ..     631     653 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.79
   PF13374.1   7 nLAlalrargryeeA 21 
                 nLA+a+++ + y+eA
  MMETSP1325-20131115|9118_1 171 NLANAYHKNKMYDEA 185
                 9******99988888 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00076
   PF13374.1   6 nnLAlalrargryeeAlaleeeal 29 
                  n +++++++++y +A ++++ al
  MMETSP1325-20131115|9118_1 206 VNMGNIYYEQKKYPQAIKMYRMAL 229
                 59******************9887 PP

  == domain 3    score: 4.7 bits;  conditional E-value: 0.044
   PF13374.1   7 nLAlalrargryeeAlaleeeal 29 
                 n+++a+ ++g++++A + +e ++
  MMETSP1325-20131115|9118_1 246 NIGNAFVRLGQFQDAIQSYETIM 268
                 99*************98888776 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 3.7
   PF13374.1   7 nLAlalrargryee 20 
                 nL l ++a+g+ ++
  MMETSP1325-20131115|9118_1 279 NLVLCYYALGDADK 292
                 8999******9886 PP

  == domain 5    score: -1.5 bits;  conditional E-value: 4
   PF13374.1   8 LAlalrargryeeAla 23 
                  A+++ +++++ +A +
  MMETSP1325-20131115|9118_1 392 MAIRYLKQKQFSQAIE 407
                 699********99965 PP

  == domain 6    score: 4.3 bits;  conditional E-value: 0.058
   PF13374.1   2 aaalnnLAlalrargryeeAlale 25 
                 a+a++nL  +++   +y +A++++
  MMETSP1325-20131115|9118_1 421 AMAATNLSFIYFLEQEYTQAEKYA 444
                 99*******************987 PP

  == domain 7    score: -1.1 bits;  conditional E-value: 2.9
   PF13374.1   3 aalnnLAlalrargryeeAlaleeea 28 
                  al n ++ l  rg+++ A +++ ea
  MMETSP1325-20131115|9118_1 456 KALVNKGNCLLLRGELDMAKQFFLEA 481
                 588999*************9998776 PP

  == domain 8    score: -0.1 bits;  conditional E-value: 1.5
   PF13374.1   7 nLAlalrargryeeAlaleeeala 30 
                 nL+l+  ++g ++eA + +e+  +
  MMETSP1325-20131115|9118_1 494 NLGLVNIRMGSLQEAHQAFEKLHT 517
                 999999*********999888765 PP

  == domain 9    score: -0.6 bits;  conditional E-value: 2
   PF13374.1   6 nnLAlalrargryeeAlaleeealai 31 
                 + L++ + +   ye+A  ++e+a  i
  MMETSP1325-20131115|9118_1 595 SWLGVWYVKSELYEKAIHFFERASQI 620
                 679999999999*********99877 PP

  == domain 10    score: 9.2 bits;  conditional E-value: 0.0017
   PF13374.1  11 alrargryeeAlaleeeal 29 
                  +r++ +y++Al+l+e++ 
  MMETSP1325-20131115|9118_1 634 CYRRMHNYQKALELYERIH 652
                 69**************986 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.093        55       3      58 ..     174     231 ..     172     241 .. 0.83
   2 ?    4.8   0.0     0.037        22       3      56 ..     210     268 ..     209     273 .. 0.80
   3 ?    0.3   0.0         1   5.9e+02      34      61 ..     391     418 ..     376     426 .. 0.73
   4 ?   -1.4   0.0       3.2   1.9e+03       4      22 ..     430     448 ..     427     478 .. 0.70
   5 ?    3.7   0.0     0.083        49      27      55 ..     487     515 ..     481     525 .. 0.82
   6 ?    3.9   0.0     0.071        42      11      51 ..     505     545 ..     500     563 .. 0.83
   7 !   15.1   0.1   2.4e-05     0.014       3      62 ..     599     658 ..     597     667 .. 0.93

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.093
   PF13371.1   3 aiylreedferALavverllll..aPddpyerRDrGlllaqlgclaaAaedLeaflel 58 
                 ++y  ++++++A+  + +l+     P++ ++r   G +++++  + +A++ ++ +l++
  MMETSP1325-20131115|9118_1 174 NAYHKNKMYDEAIHTYSLLVKNkqYPQSGRLRVNMGNIYYEQKKYPQAIKMYRMALDQ 231
                 7888999999999999999888667899999999999999999999999988877776 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.037
   PF13371.1   3 aiylreedferALavverllllaPd.....dpyerRDrGlllaqlgclaaAaedLeafl 56 
                 +iy +++++++A++++ + l   P      +    R  G + ++lg+++ A++ +e+ +
  MMETSP1325-20131115|9118_1 210 NIYYEQKKYPQAIKMYRMALDQIPPtgkeiRFKIFRNIGNAFVRLGQFQDAIQSYETIM 268
                 5888899999999999998877666466666666789999*************999865 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 1
   PF13371.1  34 DrGlllaqlgclaaAaedLeaflelcpd 61 
                 D ++ + ++ ++++A+e L  f +++ +
  MMETSP1325-20131115|9118_1 391 DMAIRYLKQKQFSQAIEVLKSFEKKDQQ 418
                 6677788888999999988888554444 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 3.2
   PF13371.1   4 iylreedferALavverll 22 
                 iy+ e+++ +A +++++  
  MMETSP1325-20131115|9118_1 430 IYFLEQEYTQAEKYADLAY 448
                 8999999999999999865 PP

  == domain 5    score: 3.7 bits;  conditional E-value: 0.083
   PF13371.1  27 ddpyerRDrGlllaqlgclaaAaedLeaf 55 
                 d ++ +   Gl+  ++g l++A +++e  
  MMETSP1325-20131115|9118_1 487 DCVEAIFNLGLVNIRMGSLQEAHQAFEKL 515
                 678889999*************9999976 PP

  == domain 6    score: 3.9 bits;  conditional E-value: 0.071
   PF13371.1  11 ferALavverllllaPddpyerRDrGlllaqlgclaaAaed 51 
                  ++A ++ e l  + P+ p+ ++  + l++q g+l+ A++ 
  MMETSP1325-20131115|9118_1 505 LQEAHQAFEKLHTIIPHNPEVIYHIASLYEQNGDLHNAIKW 545
                 567777888888899***********************975 PP

  == domain 7    score: 15.1 bits;  conditional E-value: 2.4e-05
   PF13371.1   3 aiylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpda 62 
                  +y  +e +e+A+   er  +++P+ +  r     ++ ++ +++ A+e +e+  +  p+ 
  MMETSP1325-20131115|9118_1 599 VWYVKSELYEKAIHFFERASQIQPNEVKWRLMVTSCYRRMHNYQKALELYERIHAEHPEN 658
                 599*************************************************99888865 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.056        33       6      28 ..     172     194 ..     171     196 .. 0.83
   2 ?    0.5   0.0       1.1   6.5e+02       8      21 ..     249     262 ..     244     268 .. 0.87
   3 ?   -0.0   0.0       1.7   9.8e+02      10      29 ..     396     415 ..     392     416 .. 0.87
   4 ?   -1.2   0.0         4   2.4e+03       9      25 ..     464     480 ..     463     482 .. 0.82
   5 ?   -2.3   0.0       9.1   5.4e+03      12      26 ..     501     515 ..     500     516 .. 0.86
   6 ?    3.0   0.0      0.18   1.1e+02       8      24 ..     531     547 ..     529     551 .. 0.89
   7 ?    1.4   0.0      0.57   3.4e+02      10      25 ..     601     616 ..     600     618 .. 0.92
   8 ?    4.2   0.0     0.074        44       8      26 ..     633     651 ..     630     655 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.056
  PF01535.15   6 lIsgyckaGkleeAlelfkeMke 28 
                 l ++y k+++++eA+  +  +++
  MMETSP1325-20131115|9118_1 172 LANAYHKNKMYDEAIHTYSLLVK 194
                 679***********988877665 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 1.1
  PF01535.15   8 sgyckaGkleeAle 21 
                 +++++ G++++A++
  MMETSP1325-20131115|9118_1 249 NAFVRLGQFQDAIQ 262
                 79**********86 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 1.7
  PF01535.15  10 yckaGkleeAlelfkeMkek 29 
                 y k ++++ A+e++k  ++k
  MMETSP1325-20131115|9118_1 396 YLKQKQFSQAIEVLKSFEKK 415
                 88999*********987775 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 4
  PF01535.15   9 gyckaGkleeAlelfke 25 
                 ++   G+l++A ++f e
  MMETSP1325-20131115|9118_1 464 CLLLRGELDMAKQFFLE 480
                 566689*******9976 PP

  == domain 5    score: -2.3 bits;  conditional E-value: 9.1
  PF01535.15  12 kaGkleeAlelfkeM 26 
                 + G l+eA + f+++
  MMETSP1325-20131115|9118_1 501 RMGSLQEAHQAFEKL 515
                 7899*****999975 PP

  == domain 6    score: 3.0 bits;  conditional E-value: 0.18
  PF01535.15   8 sgyckaGkleeAlelfk 24 
                 s y ++G+l  A+++f+
  MMETSP1325-20131115|9118_1 531 SLYEQNGDLHNAIKWFN 547
                 5799************7 PP

  == domain 7    score: 1.4 bits;  conditional E-value: 0.57
  PF01535.15  10 yckaGkleeAlelfke 25 
                 y+k+ ++e+A+ +f++
  MMETSP1325-20131115|9118_1 601 YVKSELYEKAIHFFER 616
                 99**********9986 PP

  == domain 8    score: 4.2 bits;  conditional E-value: 0.074
  PF01535.15   8 sgyckaGkleeAlelfkeM 26 
                 s+y +  ++++Alel++++
  MMETSP1325-20131115|9118_1 633 SCYRRMHNYQKALELYERI 651
                 799999**********987 PP

>> PF11817.3  Foie gras liver health family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.86   5.1e+02     180     205 ..     168     195 ..     111     202 .. 0.77
   2 ?    3.0   0.1     0.093        55     171     204 ..     195     228 ..     171     232 .. 0.78
   3 ?    3.7   0.0     0.056        33     182     204 ..     245     267 ..     236     277 .. 0.85
   4 !    8.9   0.2    0.0015      0.87     173     204 ..     373     412 ..     282     421 .. 0.64
   5 ?   -0.6   0.0       1.2   6.9e+02     161     204 ..     505     549 ..     499     553 .. 0.74
   6 ?    3.8   0.1     0.053        32     155     204 ..     601     651 ..     564     655 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.86
   PF11817.3 180 lslemAeeylrlgdwskAlelldpl..a 205
                 + +++A+ y + + +++A+ +++ l  +
  MMETSP1325-20131115|9118_1 168 VCFNLANAYHKNKMYDEAIHTYSLLvkN 195
                 34599**************999987644 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.093
   PF11817.3 171 rkqtRmaeelslemAeeylrlgdwskAlelldpl 204
                 +kq      l+++m++ y++ +++ +A+++++++
  MMETSP1325-20131115|9118_1 195 NKQYPQSGRLRVNMGNIYYEQKKYPQAIKMYRMA 228
                 444445567999*******************986 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.056
   PF11817.3 182 lemAeeylrlgdwskAlelldpl 204
                  ++++ ++rlg++++A++ ++++
  MMETSP1325-20131115|9118_1 245 RNIGNAFVRLGQFQDAIQSYETI 267
                 5899****************998 PP

  == domain 4    score: 8.9 bits;  conditional E-value: 0.0015
   PF11817.3 173 q........tRmaeelslemAeeylrlgdwskAlelldpl 204
                 +        + +a+el+++mA  yl+ +++s+A+e+l+  
  MMETSP1325-20131115|9118_1 373 IidvlkpdhEDLASELEIDMAIRYLKQKQFSQAIEVLKSF 412
                 34444444466899**********************9865 PP

  == domain 5    score: -0.6 bits;  conditional E-value: 1.2
   PF11817.3 161 LekaleeFkkrkq.tRmaeelslemAeeylrlgdwskAlelldpl 204
                 L++a++ F+k++       e+ + +A  y + gd  +A++ ++ l
  MMETSP1325-20131115|9118_1 505 LQEAHQAFEKLHTiIPHNPEVIYHIASLYEQNGDLHNAIKWFNIL 549
                 666666666666554455678899999999999999999999877 PP

  == domain 6    score: 3.8 bits;  conditional E-value: 0.053
   PF11817.3 155 keiielLekaleeFkkrkq.tRmaeelslemAeeylrlgdwskAlelldpl 204
                     el+eka++ F+  +q +    + +l +   y r+ +++kAlel++++
  MMETSP1325-20131115|9118_1 601 YVKSELYEKAIHFFERASQiQPNEVKWRLMVTSCYRRMHNYQKALELYERI 651
                 5567899999999998888666666778888999**************987 PP

>> PF10300.4  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.7e-06    0.0034     238     338 ..     178     278 ..     156     354 .. 0.80
   2 ?    1.9   0.8       0.1        60     274     326 ..     398     446 ..     392     455 .. 0.82
   3 ?   -1.2   0.1      0.85     5e+02     265     327 ..     458     515 ..     433     518 .. 0.65
   4 ?   -2.5   0.1       2.2   1.3e+03     253     289 ..     616     652 ..     601     669 .. 0.58

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 5.7e-06
   PF10300.4 238 stleapleeleelLeksrkrfPksalwllfearieslkgnldeAlelleeiidesqselkqvkalclfelalclvllheyeeaaesfleLlelskwSkalY 338
                 +++ ++ ++ +  L+  +k++P+s  + ++ + i+  +++  +A++++ +++d+     k++   ++ +++ ++v l ++++a++s + ++  +   ++ +
  MMETSP1325-20131115|9118_1 178 KNKMYDEAIHTYSLLVKNKQYPQSGRLRVNMGNIYYEQKKYPQAIKMYRMALDQIPPTGKEIRFKIFRNIGNAFVRLGQFQDAIQSYETIMAGNADFQTGF 278
                 5566777888888999999*******************************************************************999988776655555 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.1
   PF10300.4 274 lkgnldeAlelleeiidesqselkqvkalclfelalclvllheyeeaaesfle 326
                  ++++ +A+e+l++     +++ +q  a+   +l++++ l++ey +a +++++
  MMETSP1325-20131115|9118_1 398 KQKQFSQAIEVLKSF----EKKDQQHRAMAATNLSFIYFLEQEYTQAEKYADL 446
                 688999*******75....3444577789999***************999876 PP

  == domain 3    score: -1.2 bits;  conditional E-value: 0.85
   PF10300.4 265 llfearieslkgnldeAlelleeiidesqselkqvkalclfelalclvllheyeeaaesfleL 327
                 l++++  + l g+ld+A + + e+i+ +++    v+a  +f+l+l+++ +   +ea ++f++L
  MMETSP1325-20131115|9118_1 458 LVNKGNCLLLRGELDMAKQFFLEAIGVEADC---VEA--IFNLGLVNIRMGSLQEAHQAFEKL 515
                 679999999**********999998544333...332..466666666666666666666555 PP

  == domain 4    score: -2.5 bits;  conditional E-value: 2.2
   PF10300.4 253 ksrkrfPksalwllfearieslkgnldeAlelleeii 289
                 ++++  P+   w l+    ++  +n ++Alel+e i 
  MMETSP1325-20131115|9118_1 616 RASQIQPNEVKWRLMVTSCYRRMHNYQKALELYERIH 652
                 4444445555555666666666666666666666554 PP

>> PF10516.4  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.037        22       8      28 ..     209     229 ..     206     230 .. 0.85
   2 ?   -1.9   0.0       3.1   1.8e+03      16      22 ..     401     407 ..     397     410 .. 0.83
   3 ?   -0.7   0.0       1.3   7.7e+02       3      21 ..     464     482 ..     463     482 .. 0.87
   4 ?    5.4   0.0     0.016       9.4      22      37 ..     639     654 ..     638     655 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.037
   PF10516.4   8 GEiSlEnEnFpqAveDlrkaL 28 
                 G+i  E+ ++pqA++ +r aL
  MMETSP1325-20131115|9118_1 209 GNIYYEQKKYPQAIKMYRMAL 229
                 67777999*******999888 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 3.1
   PF10516.4  16 nFpqAve 22 
                 +F+qA+e
  MMETSP1325-20131115|9118_1 401 QFSQAIE 407
                 8****97 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 1.3
   PF10516.4   3 vydlLGEiSlEnEnFpqAv 21 
                 +++l GE+++ + +F +A+
  MMETSP1325-20131115|9118_1 464 CLLLRGELDMAKQFFLEAI 482
                 67777***********997 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.016
   PF10516.4  22 eDlrkaLeLreqllpp 37 
                 ++++kaLeL+e ++ +
  MMETSP1325-20131115|9118_1 639 HNYQKALELYERIHAE 654
                 58*********99865 PP

>> PF10938.3  YfdX protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.0    0.0003      0.18      20      91 ..      73     152 ..      68     168 .. 0.73
   2 ?    4.1   0.1     0.048        29     120     144 ..     389     413 ..     385     417 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.0003
   PF10938.3  20 qAkkalerAtkkleaakaddpklakaesdlkvpad..........allpVdaevtviddfaatpekkaaikeankllkkgek 91 
                 +A k+++rA + l+  + + p+la  e+  ++p+d          +l+ V ae  v dd++++ e+++   + +++l k+++
  MMETSP1325-20131115|9118_1  73 SANKQTNRAFDPLNQGRGAAPALA--EKAENSPEDlakdmekqvnRLIEVSAEAAVKDDYTTALEQAKEAGKKERALCKHRE 152
                 566666666666666666666665..6666666666666777788**************88888877777777777766654 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.048
   PF10938.3 120 avkqAaelldegkyyeAkaaLkkAe 144
                  +++A ++l+++++++A ++Lk  e
  MMETSP1325-20131115|9118_1 389 EIDMAIRYLKQKQFSQAIEVLKSFE 413
                 58999***************99866 PP

>> PF09345.5  Domain of unknown function (DUF1987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2    0.0003      0.18      21      78 ..     364     421 ..     358     441 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.0003
   PF09345.5  21 enaeefyepvldwleeylkepkkkltlnfkleYfntssskalleilklLeklakkgkk 78 
                 +n+++ y+ ++d+l+   ++ +++l++++++ Y+ ++  +  +e+lk +ek  +++++
  MMETSP1325-20131115|9118_1 364 DNSAAGYKYIIDVLKPDHEDLASELEIDMAIRYLKQKQFSQAIEVLKSFEKKDQQHRA 421
                 577888********************************************99665544 PP

>> PF10579.4  Rapsyn N-terminal myristoylation and linker region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0    0.0028       1.6      10      64 ..     206     262 ..     198     271 .. 0.88
   2 ?    0.5   0.0      0.81   4.8e+02      21      75 ..     640     691 ..     634     693 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0028
   PF10579.4  10 iekGLrlYqsnetekaleiWrkvlkkt..tdregrfrvLGcLitahsemGkykemlk 64 
                 ++ G   Y++ +  +a++++r +l +   t +e rf++   + +a   +G+++++++
  MMETSP1325-20131115|9118_1 206 VNMGNIYYEQKKYPQAIKMYRMALDQIppTGKEIRFKIFRNIGNAFVRLGQFQDAIQ 262
                 66677789****************9953378899*********************97 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.81
   PF10579.4  21 etekaleiWrkvlkkttdregrfrvLGcLitahsemGkykemlkfavaqieiare 75 
                 + +kale+++++    +++++    L +L+    ++G+  ++ +  + ++++ r+
  MMETSP1325-20131115|9118_1 640 NYQKALELYERIH---AEHPENLECLRYLVAICKDLGRPYDVYQQKLSRLDTGRQ 691
                 5567777777664...566677777888999999999988888888888887775 PP

>> PF07720.7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   0.00023      0.14       6      29 ..     171     192 ..     166     194 .. 0.88
   2 ?    8.1   0.2    0.0035       2.1      11      28 ..     212     227 ..     209     229 .. 0.87
   3 ?   -1.6   0.0       3.7   2.2e+03      15      26 ..     255     264 ..     254     265 .. 0.84
   4 ?    0.3   0.1      0.97   5.8e+02      14      23 ..     399     408 ..     396     410 .. 0.89
   5 ?    1.0   1.2      0.56   3.3e+02      10      31 ..     430     449 ..     427     454 .. 0.78
   6 ?    2.3   0.0      0.23   1.4e+02      17      29 ..     607     617 ..     604     623 .. 0.74
   7 ?    2.8   0.1      0.16        93      16      26 ..     640     648 ..     638     649 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00023
                 HHHHHHHHTT-HHHHHHH..HHHH CS
   PF07720.7   6 slAaefynkkkyqeArelfsYall 29 
                  lA +++  k y+eA++++s  ll
  MMETSP1325-20131115|9118_1 171 NLANAYHKNKMYDEAIHTYS--LL 192
                 68999*************88..98 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0035
                 HHHTT-HHHHHHH..HHH CS
   PF07720.7  11 fynkkkyqeArelfsYal 28 
                 +y +kky +A++   Y+ 
  MMETSP1325-20131115|9118_1 212 YYEQKKYPQAIKM--YRM 227
                 9***********9..875 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 3.7
                 T-HHHHHHH..H CS
   PF07720.7  15 kkyqeArelfsY 26 
                 +++q+A++   Y
  MMETSP1325-20131115|9118_1 255 GQFQDAIQS--Y 264
                 89*****98..5 PP

  == domain 4    score: 0.3 bits;  conditional E-value: 0.97
                 TT-HHHHHHH CS
   PF07720.7  14 kkkyqeArel 23 
                 +k++ +A+e+
  MMETSP1325-20131115|9118_1 399 QKQFSQAIEV 408
                 8*******98 PP

  == domain 5    score: 1.0 bits;  conditional E-value: 0.56
                 HHHHTT-HHHHHHH..HHHHHH CS
   PF07720.7  10 efynkkkyqeArelfsYallai 31 
                  +++ ++y++A+++ +  l+++
  MMETSP1325-20131115|9118_1 430 IYFLEQEYTQAEKYAD--LAYT 449
                 578899********77..7776 PP

  == domain 6    score: 2.3 bits;  conditional E-value: 0.23
                 HHHHHHH..HHHH CS
   PF07720.7  17 yqeArelfsYall 29 
                 y++A+++  ++ +
  MMETSP1325-20131115|9118_1 607 YEKAIHF--FERA 617
                 9******..5555 PP

  == domain 7    score: 2.8 bits;  conditional E-value: 0.16
                 -HHHHHHH..H CS
   PF07720.7  16 kyqeArelfsY 26 
                 +yq+A+el  Y
  MMETSP1325-20131115|9118_1 640 NYQKALEL--Y 648
                 8*******..6 PP

>> PF08631.5  Meiosis protein SPO22/ZIP4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.85   5.1e+02     249     273 ..     167     191 ..     159     195 .. 0.85
   2 ?    8.8   0.0    0.0011      0.66     253     276 ..     207     230 ..     206     232 .. 0.92
   3 ?    0.8   0.1       0.3   1.8e+02      59     102 ..     402     445 ..     333     453 .. 0.78
   4 ?   -1.1   0.0       1.1   6.8e+02      41      61 ..     529     548 ..     524     559 .. 0.58
   5 ?   -3.3   0.0       5.3   3.1e+03     104     119 ..     642     657 ..     632     684 .. 0.54

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.85
   PF08631.5 249 alLWnkakklyktknydealewykl 273
                 a+ +n a+ + k+k ydea++ y+l
  MMETSP1325-20131115|9118_1 167 AVCFNLANAYHKNKMYDEAIHTYSL 191
                 56688899999**********9986 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0011
   PF08631.5 253 nkakklyktknydealewyklalh 276
                 n+++ +y++k+y +a+++y++al 
  MMETSP1325-20131115|9118_1 207 NMGNIYYEQKKYPQAIKMYRMALD 230
                 7999******************96 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.3
   PF08631.5  59 lkraldlleklakidqkstelselkfsvlrllakalletgeses 102
                 +++a+++l++ +k dq+++   + ++s +++l +++ +++++++
  MMETSP1325-20131115|9118_1 402 FSQAIEVLKSFEKKDQQHRAMAATNLSFIYFLEQEYTQAEKYAD 445
                 45677777777777777777777777777777777777777665 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 1.1
   PF08631.5  41 iGkellerktdfseavkwlkr 61 
                 i+ +l+e++ d+ +a+kw++ 
  MMETSP1325-20131115|9118_1 529 IA-SLYEQNGDLHNAIKWFNI 548
                 33.334444466666666654 PP

  == domain 5    score: -3.3 bits;  conditional E-value: 5.3
   PF08631.5 104 lkakkvlsllesefpn 119
                 +ka+++ + +  e+p+
  MMETSP1325-20131115|9118_1 642 QKALELYERIHAEHPE 657
                 3333333333333333 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.8         1   5.9e+02       5      31 ..     133     153 ..     129     207 .. 0.51
   2 ?    4.3   0.0     0.057        34      17      34 ..     214     231 ..     206     235 .. 0.90
   3 ?   -1.5   0.0       3.5   2.1e+03      19      29 ..     255     265 ..     253     266 .. 0.86
   4 ?    4.9   0.0     0.036        21      26      50 ..     605     629 ..     604     638 .. 0.86
   5 ?    1.3   0.2      0.49   2.9e+02      19      29 ..     639     649 ..     636     650 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF04212.13   5 AlelikkAveaDeagkyeeAlelYkeA 31 
                 Ale++k+A ++++a      l   +eA
  MMETSP1325-20131115|9118_1 133 ALEQAKEAGKKERA------LCKHREA 153
                 44444444444443......3333333 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.057
                 HTT-HHHHHHHHHHHHHH CS
  PF04212.13  17 eagkyeeAlelYkeAlel 34 
                 e++ky +A++ Y+ Al+ 
  MMETSP1325-20131115|9118_1 214 EQKKYPQAIKMYRMALDQ 231
                 689************985 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 3.5
                 T-HHHHHHHHH CS
  PF04212.13  19 gkyeeAlelYk 29 
                 g++++A+++Y+
  MMETSP1325-20131115|9118_1 255 GQFQDAIQSYE 265
                 899*******6 PP

  == domain 4    score: 4.9 bits;  conditional E-value: 0.036
                 HHHHHHHHHHHHHHHHCTTHHCHHH CS
  PF04212.13  26 elYkeAlelLlqalkyepnperrea 50 
                 elY++A++ +++a + +pn+ + ++
  MMETSP1325-20131115|9118_1 605 ELYEKAIHFFERASQIQPNEVKWRL 629
                 79***************99877555 PP

  == domain 5    score: 1.3 bits;  conditional E-value: 0.49
                 T-HHHHHHHHH CS
  PF04212.13  19 gkyeeAlelYk 29 
                 ++y++AlelY+
  MMETSP1325-20131115|9118_1 639 HNYQKALELYE 649
                 58999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (780 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       748  (0.0547104); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 1.39u 0.37s 00:00:01.75 Elapsed: 00:00:00.75
# Mc/sec: 2492.21
//
Query:       MMETSP1325-20131115|9131_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-32  109.2  53.0      7e-12   45.0   4.2    4.1  5  PF13345.1 Domain of unknown function (DUF4098)
    7.1e-11   41.8  16.0    4.2e-08   32.8   0.2    4.5  4  PF13349.1 Domain of unknown function (DUF4097)
  ------ inclusion threshold ------
      0.024   14.1   0.4       0.19   11.2   0.0    2.2  2  PF10106.4 Uncharacterized protein conserved in bacteria (DUF2345)
       0.11   10.8  16.3      0.077   11.2   1.8    2.2  2  PF03961.8 Protein of unknown function (DUF342)


Domain annotation for each model (and alignments):
>> PF13345.1  Domain of unknown function (DUF4098)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   4.0   3.3e-10   1.1e-06      14      59 ..      42      87 ..      36      90 .. 0.90
   2 !   38.2   5.7   2.6e-13   8.7e-10       8      59 ..      74     123 ..      72     128 .. 0.91
   3 !   36.7   6.2     8e-13   2.7e-09       5      57 ..      89     139 ..      86     140 .. 0.88
   4 !   45.0   4.2     2e-15     7e-12       5      75 ..     125     194 ..     121     195 .. 0.94
   5 !    5.3   0.0    0.0049        17      25      39 ..     204     218 ..     196     227 .. 0.60

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 3.3e-10
   PF13345.1 14 GdiklsnltgedldvktgsGditlenltgndvsvstgsGditlkgt 59
                  i+++ ++g +ld++++sGd+++ nl++ +++++++sGditl+++
  MMETSP1325-20131115|9131_1 42 SRIDVTIVDGVKLDIDNSSGDVNVANLRASSSKIEASSGDITLRSI 87
                5699999999********************************9985 PP

  == domain 2    score: 38.2 bits;  conditional E-value: 2.6e-13
   PF13345.1   8 svetssGdiklsnltgedldvktgsGditlenltgndvsvstgsGditlkgt 59 
                 ++e+ssGdi+l+++ ++ ldv+t+sGdi++++ltg d++++++sGd ++ +t
  MMETSP1325-20131115|9131_1  74 KIEASSGDITLRSIVAN-LDVETSSGDIDIDGLTG-DSEIESTSGDQDIFNT 123
                 6899*************.*****************.**********998775 PP

  == domain 3    score: 36.7 bits;  conditional E-value: 8e-13
   PF13345.1   5 kklsvetssGdiklsnltgedldvktgsGditlenltgndvsvstgsGditlk 57 
                  +l+vetssGdi++++ltg+  +++++sGd ++ n +g d++ +++sGdit+ 
  MMETSP1325-20131115|9131_1  89 ANLDVETSSGDIDIDGLTGD-SEIESTSGDQDIFNTKG-DIETRASSGDITIS 139
                 58999999999999999999.99999999999999999.99999999999986 PP

  == domain 4    score: 45.0 bits;  conditional E-value: 2e-15
   PF13345.1   5 kklsvetssGdiklsnltgedldvktgsGditlenltgndvsvstgsGditlkgteag.svdaktssGdikl 75 
                 ++++ ++ssGdi++s+ +ge ++v ++sGd+++++++g  ++++t+sG+i+ +++e++ +++++ +sGdi++
  MMETSP1325-20131115|9131_1 125 GDIETRASSGDITISGFNGE-IEVIATSGDVEIRKGEG-VIRARTSSGNIDGYSIEVTdDCYFDATSGDIEI 194
                 7899999*************.*****************.7**************99888***********98 PP

  == domain 5    score: 5.3 bits;  conditional E-value: 0.0049
   PF13345.1  25 dldvktgsGditlen 39 
                 ++d++++sGd++++n
  MMETSP1325-20131115|9131_1 204 SFDLTASSGDLEVGN 218
                 355566666666555 PP

>> PF13349.1  Domain of unknown function (DUF4097)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.2   1.2e-11   4.2e-08      85     165 ..      10      84 ..       1      85 [. 0.81
   2 !    9.5   0.8   0.00018      0.61     133     163 ..      89     118 ..      86     121 .. 0.88
   3 !    3.8   0.2    0.0098        33     134     165 ..     126     156 ..     120     157 .. 0.77
   4 !    4.0   0.0    0.0084        29     135     165 ..     163     194 ..     160     195 .. 0.86

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 1.2e-11
   PF13349.1  85 k.klkvkvnggtLtikek.ereniffggfnfnns.nekskitiyvPkkyklnslkiksssGdislsdlklkdlelstssGdvkl 165
                   +++ +  g+tL i+++ +r+      +   n+  ++s+i++++ ++    +l+i++ssGd+++ +l++++ ++++ssGd++l
  MMETSP1325-20131115|9131_1  10 DyQFDTDIVGKTLVIRVErKRD----RSW--RNYrITESRIDVTIVDGV---KLDIDNSSGDVNVANLRASSSKIEASSGDITL 84 
                 256888999*********4555....445..3433689*******9998...699***************************97 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00018
   PF13349.1 133 nslkiksssGdislsdlklkdlelstssGdv 163
                  +l++++ssGdi+++ l+  d e++++sGd 
  MMETSP1325-20131115|9131_1  89 ANLDVETSSGDIDIDGLT-GDSEIESTSGDQ 118
                 589**************9.889999999986 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.0098
   PF13349.1 134 slkiksssGdislsdlklkdlelstssGdvkl 165
                 +++   ssGdi++s ++  ++e+ ++sGdv++
  MMETSP1325-20131115|9131_1 126 DIETRASSGDITISGFN-GEIEVIATSGDVEI 156
                 67888899*******99.56666666668875 PP

  == domain 4    score: 4.0 bits;  conditional E-value: 0.0084
   PF13349.1 135 lkiksssGdislsdlklk.dlelstssGdvkl 165
                 +++ +ssG+i+  ++++  d  ++++sGd+++
  MMETSP1325-20131115|9131_1 163 IRARTSSGNIDGYSIEVTdDCYFDATSGDIEI 194
                 6788999****99998875789*******986 PP

>> PF10106.4  Uncharacterized protein conserved in bacteria (DUF2345)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0       0.1   3.4e+02      85      96 ..      74      85 ..      59     117 .. 0.56
   2 ?   11.2   0.0   5.6e-05      0.19      77     139 ..     120     182 ..     113     195 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.1
   PF10106.4 85 elqAqkddlell 96
                +++A ++d++l+
  MMETSP1325-20131115|9131_1 74 KIEASSGDITLR 85
                344444444433 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 5.6e-05
   PF10106.4  77 lvAakGkvelqAqkddlellA.kkdvkltstegkveiaAkkeillnaggsyirleggnIelgtp 139
                 ++  kG++e +A ++d+++   + ++++ +t+g+vei    e ++ a  s+ +++g  Ie+   
  MMETSP1325-20131115|9131_1 120 IFNTKGDIETRASSGDITISGfNGEIEVIATSGDVEIRK-GEGVIRARTSSGNIDGYSIEVTDD 182
                 67789**************994558************96.888999999999999999998755 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   4.5    0.0019       6.4     172     234 ..      40     117 ..      37     130 .. 0.86
   2 ?   11.2   1.8   2.3e-05     0.077     214     251 ..     132     165 ..     122     201 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.0019
   PF03961.8 172 kkngisVdpvleik.dVdlstGnIk.............fkGsViikGnVeegmkVk.AsgditikGvvesatieA.ggn 234
                 ++++i+V  v  +k d+d s+G+++               G+++ +  V ++  V+ +sgdi i G +  ++ie+ +g+
  MMETSP1325-20131115|9131_1  40 TESRIDVTIVDGVKlDIDNSSGDVNvanlrassskieaSSGDITLRSIV-ANLDVEtSSGDIDIDGLTGDSEIEStSGD 117
                 567799999999*********************************9988.666665278***************96654 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 2.3e-05
   PF03961.8 214 AsgditikGvvesatieA.ggnItikgGiigkgkgkikA 251
                 +sgditi+G+  + +++A +g+++i++G     +g+i+A
  MMETSP1325-20131115|9131_1 132 SSGDITISGFNGEIEVIAtSGDVEIRKG-----EGVIRA 165
                 68*********99999999*******75.....233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.52
# Mc/sec: 1064.54
//
Query:       MMETSP1325-20131115|9132_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|9133_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       461  (0.0337185); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.59
# Mc/sec: 828.57
//
Query:       MMETSP1325-20131115|9135_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 421.58
//
Query:       MMETSP1325-20131115|9134_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-23   79.6   9.4      2e-10   40.0   0.1    4.3  4  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.3e-07    0.0031      12      38 ..      24      50 ..      22      51 .. 0.93
   2 ?    0.9   0.1     0.032   4.4e+02      12      38 ..      75     101 ..      54     102 .. 0.72
   3 !   25.0   0.1   7.7e-10   1.1e-05      10      39 .]     116     145 ..     111     145 .. 0.93
   4 !   40.0   0.1   1.5e-14     2e-10       7      39 .]     155     187 ..     149     187 .. 0.93

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.3e-07
                SSEEEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27 12 spVtcvafspdgpllasgSrDgtirlW 38
                sp+ ++++s +g++l++g rDg   lW
  MMETSP1325-20131115|9134_1 24 SPIHSLCWSSEGRRLVTGNRDGEFTLW 50
                79********************98888 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.032
                 SSEEEEEEESSSTEEEEEETTSEEEEE CS
  PF00400.27  12 spVtcvafspdgpllasgSrDgtirlW 38 
                 s ++++    dg  ++sg + gti+ W
  MMETSP1325-20131115|9134_1  75 SQINAITLRRDGLSFISGDSVGTIKYW 101
                 456666666667777777766888888 PP

  == domain 3    score: 25.0 bits;  conditional E-value: 7.7e-10
                 SSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  10 HtspVtcvafspdgpllasgSrDgtirlWd 39 
                  +spV  +++sp+   +as+ +Dg +r+Wd
  MMETSP1325-20131115|9134_1 116 DSSPVQGLSVSPTDEKFASCADDGRVRVWD 145
                 5799*************************9 PP

  == domain 4    score: 40.0 bits;  conditional E-value: 1.5e-14
                 EESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27   7 lrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                  +gH   V +v+++p+  llasgSrD+++rlWd
  MMETSP1325-20131115|9134_1 155 MKGHDWKVLSVDWHPSLALLASGSRDNSVRLWD 187
                 79******************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 917.07
//
Query:       MMETSP1325-20131115|9137_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-61  206.7   0.0    3.3e-61  206.5   0.0    1.0  1  PF00217.14 ATP:guanido phosphotransferase, C-terminal catalytic domain


Domain annotation for each model (and alignments):
>> PF00217.14  ATP:guanido phosphotransferase, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.5   0.0   2.4e-65   3.3e-61      64     243 .]       2     190 ..       1     190 [. 0.98

  Alignments for each domain:
  == domain 1    score: 206.5 bits;  conditional E-value: 2.4e-65
                 HHHHHHHTTSS----SHHHHCTTTTTTTTTT---EE-TTSSEEEEESSSSSEEEEEEE----HHHHHHHHHHHHHHHH........TTS-BS--S------SSGGG-----EEEEEEE-TTCGCSH..TTHHHHHHHTTEEEE------S--GGGEEEEEES--SSS-HHHHHHHHH---HHHHHHHHHH CS
  PF00217.14  64 eeeqliedhllfkkvdrllsaaglardwpegrgilvnedktflvwvNeeDHlriismqkggdlkevykrlsraldele........eklefafseklGyltscPtnlGTglrasvhiklpkLskek..eklkeilkklglqvRGiygegseavggiydiSNqrrLGlsEeeivqdlidgvkklielEkel 243
                 e +ql++dh+lf+ +dr+++a+g++++wp+grgi v+edk+f+ w+Ne DHlriism++g d+k v++rlsra +++e        ek  f++++k+G lt+cP+n+GTg+r svhi +p+L+++   ek++++++  + q+RG +ge+s++v+  +diSN+rr+G+ E+ ++qd+i++++ l +lE+++
  MMETSP1325-20131115|9137_1   2 ETKQLVDDHFLFRGKDRMQAASGYHEHWPQGRGIHVSEDKKFVSWLNEGDHLRIISMEQGSDVKGVFSRLSRAAKAIEagvkketgEKDAFMMHPKFGSLTCCPSNIGTGMRGSVHILVPNLIEQLgfEKIDALCRARNAQARGSSGEHSAVVD-RIDISNWRRIGMPEYLLIQDMIKVANFLADLEDKA 190
                 679***********************************************************************************9**************************************88************************999.78******************************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 911.56
//
Query:       MMETSP1325-20131115|9138_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   13.8   0.7      0.025   14.0   0.5    1.1  1  PF10269.4 Transmembrane Fragile-X-F protein


Domain annotation for each model (and alignments):
>> PF10269.4  Transmembrane Fragile-X-F protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.5   1.9e-06     0.025     132     169 ..      43      83 ..      10      90 .] 0.71

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.9e-06
   PF10269.4 132 vlllLkL.dkvvelswwvvfipliivlc..lallvvlylvi 169
                 +l++LkL +++ +++w  v+ p++ +l   la+++vl ++ 
  MMETSP1325-20131115|9138_1  43 MLIVLKLdGGLDNVEWKMVLGPVWCLLTvfLAFCLVLGACA 83 
                 56777775566777777777777766541144555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|9139_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.08   12.1   0.0      0.091   12.0   0.0    1.0  1  PF06482.6 Collagenase NC10 and Endostatin


Domain annotation for each model (and alignments):
>> PF06482.6  Collagenase NC10 and Endostatin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.7e-06     0.091     139     186 ..      17      74 ..       5      80 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6.7e-06
                 EEEEEXSSXBXXXXX....XHHHHHHHHHHXX....XXXXE......EESXXBTTBXG CS
   PF06482.6 139 lhliALnaPlsGnlrgirGaDfqCfqqaRaaG....lkgtf......rAfLSSrlqdL 186
                 + l  ++aP+   l  +    f  f+qaRa G    + gtf      rA+L S++qd 
  MMETSP1325-20131115|9139_1  17 MDLTTISAPYGATLLHLDKDKFRAFEQARAHGgaadVVGTFidfellRAMLTSNIQDY 74 
                 678888999999999999999********9984444679998889999********94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 400.93
//
Query:       MMETSP1325-20131115|9140_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-08   34.7   0.0    1.6e-08   34.2   0.0    1.2  1  PF08542.6  Replication factor C C-terminal domain
     0.0057   15.3   0.0     0.0062   15.2   0.0    1.1  1  PF03215.10 Rad17 cell cycle checkpoint protein
  ------ inclusion threshold ------
      0.097   11.7   0.0        0.1   11.6   0.0    1.1  1  PF13382.1  Adenine deaminase C-terminal domain


Domain annotation for each model (and alignments):
>> PF08542.6  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   3.5e-12   1.6e-08       1      53 [.      47      99 ..      47     101 .] 0.94

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 3.5e-12
                TS--HHHHHHHHHHHHTSSHHHHHHHHHHHHH----HHHHHHHHHHHHHTSTS CS
   PF08542.6  1 dwphpeliknilssilkgklaearetlyellkkgisaedIltqlyevlkdqdi 53
                d+php  + ++l++++ g+l +a++ ++ ++ +g+sa dI+++l++v+k +++
  MMETSP1325-20131115|9140_1 47 DQPHPGTMSTVLDHCMAGNLPQAHTLIKGMWDQGYSAMDIISTLFKVCKYHEM 99
                689********************************************997766 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.4e-06    0.0062     235     272 ..       2      39 ..       1      63 [. 0.88

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.4e-06
  PF03215.10 235 spkkqsvlelicqeaeGDlRsAinsLQlsssGenniRk 272
                 +p +++ le i   aeGD+R A+n LQ   sG +++ +
  MMETSP1325-20131115|9140_1   2 VPAQDDGLEAIIFTAEGDMRNALNNLQATFSGFKSVTR 39 
                 6888999************************9988765 PP

>> PF13382.1  Adenine deaminase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.3e-05       0.1      71     133 ..      13      75 ..       4      95 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.3e-05
                 E------HHHHHHHH-------EEE----EEEE----B---B-SS-HHHHHHHHHHHHHH--- CS
   PF13382.1  71 vGtndedmalAvnelielgGGivvvkdgkvlaelpLpiaGlmSdkpaeevaekleelkealke 133
                 + t + dm  A+n+l+++  G+  v++++v + +  p  G mS+   + +a +l + ++++k 
  MMETSP1325-20131115|9140_1  13 IFTAEGDMRNALNNLQATFSGFKSVTRDNVFKVCDQPHPGTMSTVLDHCMAGNLPQAHTLIKG 75 
                 567889*************************************98777777777777766664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|9141_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 337.27
//
Query:       MMETSP1325-20131115|9136_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-26   92.8   0.0    1.4e-26   92.4   0.0    1.2  1  PF00179.21 Ubiquitin-conjugating enzyme
    0.00057   19.4   0.0     0.0016   18.0   0.0    1.7  2  PF05743.8  UEV domain
  ------ inclusion threshold ------
      0.021   14.5   0.0      0.027   14.2   0.0    1.3  1  PF05773.17 RWD domain
       0.29   11.5   0.2       0.29   11.5   0.1    3.2  5  PF14086.1  Domain of unknown function (DUF4266)


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.4   0.0     4e-30   1.4e-26      19     136 ..     151     280 ..     129     284 .. 0.83

  Alignments for each domain:
  == domain 1    score: 92.4 bits;  conditional E-value: 4e-30
                 EEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS.....--SCTTB-----B-HGGGSTTT...--T.T--HHHHHHHHHHHH..HS-.-TTS-SSHHHHHHHHHT.HHHHHHHH CS
  PF00179.21  19 aevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvt.....kifHPnvdetGeicldiLkeek...Wsp.altlesvLlsiqsll..aep.npesplnkeaakllkkn.reeykkkv 136
                 ++v + ++++ +k++i gpegtpYe+g F+++i +p++YP +PPkv++vt       f+Pn+++ G++cl++L ++    W p  +tl +vL+siqsl+   +p  +e  ++  + +   ++ ++ y+ +v
  MMETSP1325-20131115|9136_1 151 VRVDD-ERIDVMKALILGPEGTPYENGAFEFDIMLPSDYPSSPPKVQLVTtgsgrVRFNPNLYNCGKVCLSLLGTWAgpgWDPvRSTLLQVLVSIQSLImvGDPfYNEPGFQSMMGTSQGEKaSAGYNYTV 280
                 44444.69*****************************************99999999*****************9999*****7799**********9988788566666666666555555455666666 PP

>> PF05743.8  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   4.6e-07    0.0016      53     112 ..     181     245 ..     162     254 .. 0.82
   2 ?   -2.6   0.0       1.1   3.7e+03      81     100 ..     309     328 ..     305     333 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 4.6e-07
                 EEE--TTTTTS--EEEE-GCC--TSGGGGGB-----B--HHHHS--T.....TT--HHHHHHHHH CS
   PF05743.8  53 liwvpesyPveaPivyvkptksmvikknenvdaqGrvylpyLeeWkr.....eksnlvslvqela 112
                  i +p++yP ++P v +  t s +++ n n+ + G+v l +L  W        +s+l++++ +++
  MMETSP1325-20131115|9136_1 181 DIMLPSDYPSSPPKVQLVTTGSGRVRFNPNLYNCGKVCLSLLGTWAGpgwdpVRSTLLQVLVSIQ 245
                 5789****************************************987444335555666655444 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.1
                 GGB-----B--HHHHS--TT CS
   PF05743.8  81 envdaqGrvylpyLeeWkre 100
                 ++   +G   +  L++W+ +
  MMETSP1325-20131115|9136_1 309 KHFKLKGSKIHAQLDRWSAQ 328
                 577788999999999**974 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   7.8e-06     0.027      50      76 ..     177     203 ..      38     244 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 7.8e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF05773.17  50 sleleirlpedYPeeaPiitlsstels 76 
                  +e++i lp dYP+++P+++l +t + 
  MMETSP1325-20131115|9136_1 177 AFEFDIMLPSDYPSSPPKVQLVTTGSG 203
                 7999*****************998765 PP

>> PF14086.1  Domain of unknown function (DUF4266)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.1   4.4         4   1.4e+04      41      47 ..       2       8 ..       1       9 [. 0.59
   2 ?   -0.9   0.1      0.63   2.1e+03      26      44 ..     104     120 ..      97     121 .. 0.80
   3 ?   -3.5   0.0         4   1.4e+04      22      35 ..     270     283 ..     265     286 .. 0.66
   4 ?   11.5   0.1   8.6e-05      0.29      32      49 ..     328     345 ..     308     346 .. 0.81
   5 ?   -6.4   1.9         4   1.4e+04      38      45 ..     368     375 ..     365     375 .. 0.56

  Alignments for each domain:
  == domain 1    score: -8.1 bits;  conditional E-value: 4
   PF14086.1 41 GkaGGGC 47
                G +GGG+
  MMETSP1325-20131115|9136_1  2 GGGGGGS 8 
                5566665 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.63
   PF14086.1  26 ddhvyfsrEgasgggGkaG 44 
                 + hv+  r++a+ +++ +G
  MMETSP1325-20131115|9136_1 104 AAHVF--RDAAAKAQSMGG 120
                 67999..****99988887 PP

  == domain 3    score: -3.5 bits;  conditional E-value: 4
   PF14086.1  22 esalddhvyfsrEg 35 
                 e+a +   y  rE+
  MMETSP1325-20131115|9136_1 270 EKASAGYNYTVREA 283
                 45556667788887 PP

  == domain 4    score: 11.5 bits;  conditional E-value: 8.6e-05
   PF14086.1  32 srEgasgggGkaGGGCGC 49 
                   +++s+ +G  GGG+GC
  MMETSP1325-20131115|9136_1 328 QAPASSATSGLPGGGSGC 345
                 55899************* PP

  == domain 5    score: -6.4 bits;  conditional E-value: 4
   PF14086.1  38 gggGkaGG 45 
                 g +G aGG
  MMETSP1325-20131115|9136_1 368 GTSGAAGG 375
                 55566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.40s 00:00:01.07 Elapsed: 00:00:00.51
# Mc/sec: 1794.92
//
Query:       MMETSP1325-20131115|9144_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|9147_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-16   59.6   0.0    2.4e-16   59.4   0.0    1.1  1  PF03133.10 Tubulin-tyrosine ligase family
    0.00089   18.0   0.0     0.0011   17.7   0.0    1.2  1  PF14398.1  YheC/D like ATP-grasp


Domain annotation for each model (and alignments):
>> PF03133.10  Tubulin-tyrosine ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   3.4e-20   2.4e-16     218     288 ..       5      75 ..       1      81 [. 0.87

  Alignments for each domain:
  == domain 1    score: 59.4 bits;  conditional E-value: 3.4e-20
  PF03133.10 218 ilaaeveasrlnvqrlkncfelyGvDilidenlkpwLlEvNasPdlksttkldaelkeeliddvlnvvvpp 288
                 i+ +++  ++ +v+ +kn++elyG+D++id+++ pwL+E+N+sP +  +t+++ e++ + + dv++vvv  
  MMETSP1325-20131115|9147_1   5 IAKHALVSAQGQVEHRKNSWELYGYDYMIDDTYRPWLIEINSSPACDYSTAVTEEFVPKALTDVIKVVVDL 75 
                 4444466678899*****************************************************87754 PP

>> PF14398.1  YheC/D like ATP-grasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.6e-07    0.0011     203     242 ..      18      57 ..       1      75 [. 0.70

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.6e-07
   PF14398.1 203 kalearlgELGlDlglDkegriWllEvNskPgkksfkeak 242
                 ++ + +    G D  +D+  r+Wl+E+Ns P++   + + 
  MMETSP1325-20131115|9147_1  18 EHRKNSWELYGYDYMIDDTYRPWLIEINSSPACDYSTAVT 57 
                 444444445599********************98887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 750.16
//
Query:       MMETSP1325-20131115|9148_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-06   26.4   0.5    4.2e-05   23.0   0.1    2.1  2  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1   3.1e-09   4.2e-05      39      64 .]      11      36 ..       3      36 .. 0.91
   2 ?    1.5   0.0     0.016   2.2e+02      21      44 ..      58      89 ..      56      94 .. 0.70

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 3.1e-09
                HHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26 39 eaeekfkeineAyevLsdpekraeyd 64
                +++ekf++++eA++vL d e+r+ yd
  MMETSP1325-20131115|9148_1 11 TQAEKFQKLSEAFQVLGDAERRSAYD 36
                5789*********************8 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.016
                HHHHHHHT-TTT--SCC........HHHHHHH CS
  PF00226.26 21 YrklalkyHPDknkdde........eeaeekf 44
                Y++ a ++HP+   + +        ++   +f
  MMETSP1325-20131115|9148_1 58 YHNPAFTVHPHSDVGRGgsipvnsmMAHSSQF 89
                999999****9977776666666655555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 766.83
//
Query:       MMETSP1325-20131115|9151_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.47s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 412.71
//
Query:       MMETSP1325-20131115|9146_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   11.4   8.0       0.88    8.8   0.0    2.2  2  PF06738.7 Protein of unknown function (DUF1212)


Domain annotation for each model (and alignments):
>> PF06738.7  Protein of unknown function (DUF1212)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   3.5    0.0027        37     103     172 ..      12      81 ..       2     119 .. 0.82
   2 ?    8.8   0.0   6.5e-05      0.88      92     150 ..     152     215 ..     147     219 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.0027
   PF06738.7 103 rwlvvlaaglacaafavlfggdwidvliaflagllggllrvvlakrklnpfvaealaaflaalialllls 172
                   + +++ gl+ +  a+  + + + ++ + +++l+g++  ++ + + l+ + a  +++ laa + ++++s
  MMETSP1325-20131115|9146_1  12 AVMILFVLGLSNVHAALSAKDSSPLMAPVSVMALVGNVAVWWPQLVALVVPTATNFSSSLAAALEYTAVS 81 
                 56778999999999999999***************************99999998888888886666653 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 6.5e-05
   PF06738.7  92 deikrkkpryprwlvvlaaglacaafavlfggdwid.....vliaflagllggllrvvlakrkl 150
                 ++ik+  ++  +++ v++ +l c a+a +f g+++d     ++ +f +g+lgg++r+ + ++ +
  MMETSP1325-20131115|9146_1 152 EAIKPHSEDALPLVDVAILALYCTAVASFFFGSPLDrifwfAAPTFYTGVLGGYFRLHVPRFDV 215
                 5688888888899999*************99997772222245677788889999998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.43s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 1226.93
//
Query:       MMETSP1325-20131115|9155_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-36  125.5   0.0    1.3e-36  125.3   0.0    1.0  1  PF00071.17 Ras family
    4.5e-08   32.4   0.1    6.3e-08   31.9   0.1    1.2  1  PF00025.16 ADP-ribosylation factor family
    4.1e-06   27.1   0.0      7e-06   26.4   0.0    1.4  1  PF08477.8  Miro-like protein


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.3   0.0   2.8e-40   1.3e-36      53     161 ..       1     110 [.       1     111 [. 0.98

  Alignments for each domain:
  == domain 1    score: 125.3 bits;  conditional E-value: 2.8e-40
                 EEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST...TTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17  53 wDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae...envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 wDTAGqe+f++l+s+yyr+a+gi+l+yd+t+++sf ++++w++e++ +++   ++v+ +LvGnK+D +  r+v++e++ee+a+++g+ fletSAktn ++++af+e++++il
  MMETSP1325-20131115|9155_1   1 WDTAGQERFRTLTSSYYRGAQGIILCYDVTRADSFASLDQWLQEMEVYCPgggREVVKLLVGNKIDKD--RVVEREQAEEWARSKGMIFLETSAKTNVGIKQAFQEVVEKIL 110
                 9*************************************************99988***********76..8**************************************997 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.1   1.4e-11   6.3e-08      63     174 ..       1     108 [.       1     109 [. 0.82

  Alignments for each domain:
  == domain 1    score: 31.9 bits;  conditional E-value: 1.4e-11
                 EE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTS..GGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHHHHHHHH CS
  PF00025.16  63 wDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkallee..eelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                 wD  Gqe+ R l ++Y++  +++i + D++  + +++  + L+++        +ev+ l+++NK+D    +++e+ +e         ++ +   ++sa ++ g+k++++ ++e+
  MMETSP1325-20131115|9155_1   1 WDTAGQERFRTLTSSYYRGAQGIILCYDVTRADSFASLDQWLQEMEVYcpGGGREVVKLLVGNKIDKDRVVEREQAEEWAR------SKGMIFLETSAKTNVGIKQAFQEVVEK 108
                 9**********************************99999999985541156789***********999988877766554......344556778888888888888877765 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.5e-09     7e-06      55     119 .]       1      66 [.       1      66 [. 0.90

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 1.5e-09
   PF08477.8  55 wdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                 wd++g+e++        + a++i+l yd+t+ +s++++++ l++++     g   ++  lvgnk+D
  MMETSP1325-20131115|9155_1   1 WDTAGQERFRTLTSSYYRGAQGIILCYDVTRADSFASLDQWLQEMEVYCPGGGReVVKLLVGNKID 66 
                 9**********98888**********************88888887776666666*********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.48s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 680.57
//
Query:       MMETSP1325-20131115|9156_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-10   40.3   0.0    7.1e-10   39.1   0.0    1.6  2  PF00005.22 ABC transporter
    0.00033   19.8   0.0    0.00043   19.4   0.0    1.1  1  PF02463.14 RecF/RecN/SMC N terminal domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.0     1e-13   7.1e-10      80     117 ..      18      54 ..       3      55 .. 0.85
   2 ?   -1.9   0.0      0.55   3.7e+03      89      89 ..      96      96 ..      63     130 .. 0.56

  Alignments for each domain:
  == domain 1    score: 39.1 bits;  conditional E-value: 1e-13
                 HHH------------HHHHHHHHHHTT--SEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  80 elldksrvstLSgGqkqrvalArallkkpklllLDEPt 117
                  ++ + r+ +LSgG++qrva+Ar++++kp+++l+DE t
  MMETSP1325-20131115|9156_1  18 TRVGE-RGAKLSGGERQRVAIARTIIRKPTVMLCDEVT 54 
                 45555.9*****************************88 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.55
                - CS
                x RF
  PF00005.22 89 t 89
                 
  MMETSP1325-20131115|9156_1 96 V 96
                2 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   6.4e-08   0.00043     136     213 ..      26      99 ..      16     105 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 6.4e-08
                 G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEEE--EE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadklvgvtk 213
                 +LSgGe++ va+a       +++  ++l De+ +a D +   +++e lk+++ n   i +++r +++ ++d+++ + +
  MMETSP1325-20131115|9156_1  26 KLSGGERQRVAIART----IIRKPTVMLCDEVTSAVDVATEIEIVEALKTANVNRTCITVAHRLKTVMHSDRIYVMAH 99 
                 69******9998755....4566667889*******************************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 757.25
//
Query:       MMETSP1325-20131115|9157_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.6    7.0   9.9         19    5.6   6.9    1.8  1  PF06392.6 Acid shock protein repeat


Domain annotation for each model (and alignments):
>> PF06392.6  Acid shock protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   6.9    0.0014        19       3      19 .]      21      38 ..      20      38 .. 0.97

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0014
   PF06392.6  3 KKqHKkAaEQ.KAQAAKK 19
                KK++K   EQ KAQA KK
  MMETSP1325-20131115|9157_1 21 KKHKKRSREQaKAQARKK 38
                9**************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       612  (0.044763); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 831.94
//
Query:       MMETSP1325-20131115|9158_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0014   18.8   0.0     0.0018   18.4   0.0    1.2  1  PF12796.2 Ankyrin repeats (3 copies)
     0.0034   17.7   0.0      0.011   16.0   0.0    1.8  1  PF13637.1 Ankyrin repeats (many copies)
      0.008   16.2   0.0       0.55   10.4   0.0    1.9  2  PF13857.1 Ankyrin repeats (many copies)
  ------ inclusion threshold ------
       0.13   11.3   0.0       0.14   11.2   0.0    1.0  1  PF04672.7 S-adenosyl methyltransferase


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   5.3e-07    0.0018      26      81 ..       5      65 ..       1      68 [. 0.78

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 5.3e-07
   PF12796.2 26 getpLhlAaeagnl.....eivklLleagadvnakdkegntpLhlAvrnghlelvklLlek 81
                g+ pL +A+ +++      e v++Ll+++a v +++keg tp + Av+  ++    l +++
  MMETSP1325-20131115|9158_1  5 GNGPLTVALTSDKSrfvkmELVNVLLAHNAGVLHENKEGATPFIQAVMDPDVSFTSLFISH 65
                677999998776653344499999***********************97777666666665 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   3.4e-06     0.011      13      54 .]      22      63 ..       5      63 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 3.4e-06
   PF13637.1 13 rlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                 +elv+ Ll++++ + + +++G t+++ A++  +++++ l++
  MMETSP1325-20131115|9158_1 22 KMELVNVLLAHNAGVLHENKEGATPFIQAVMDPDVSFTSLFI 63
                59*********9999999*************99999888876 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00039       1.3      29      54 ..      23      48 ..       1      50 [. 0.76
   2 !   10.4   0.0   0.00016      0.55       1      36 [.      29      63 ..      29      68 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00039
   PF13857.1 29 levvrlLlapgadlnlrdsdgltald 54
                 e+v  Lla++a   + +++g t++ 
  MMETSP1325-20131115|9158_1 23 MELVNVLLAHNAGVLHENKEGATPFI 48
                46677777*************99986 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00016
   PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLl 36
                Ll+h+ a v +++++g tp+ +A++  ++++  l++
  MMETSP1325-20131115|9158_1 29 LLAHN-AGVLHENKEGATPFIQAVMDPDVSFTSLFI 63
                78887.888999*************99988877776 PP

>> PF04672.7  S-adenosyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.2e-05      0.14      96     131 ..      17      52 ..      10      62 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.2e-05
   PF04672.7  96 esRvvYvDnDPivlaharallestpeGatdyieaDl 131
                 +sR v ++   + lah   +l++++eGat +i+a +
  MMETSP1325-20131115|9158_1  17 KSRFVKMELVNVLLAHNAGVLHENKEGATPFIQAVM 52 
                 6788888888899********************954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 300.63
//
Query:       MMETSP1325-20131115|9159_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   12.7   0.0      0.097   12.4   0.0    1.1  1  PF13468.1 Glyoxalase-like domain


Domain annotation for each model (and alignments):
>> PF13468.1  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.1e-06     0.097      40      82 ..      14      60 ..      12      72 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.1e-06
   PF13468.1 40 alvyfgdgYlEllavdpeae.apergrlfgld...rleqgeglsdla 82
                a++ f d+YlEl+++  +a+ ++++g + + d   +l++ ++l++ a
  MMETSP1325-20131115|9159_1 14 AVAFFSDRYLELVSIRSRARlHQKFGDFQTSDlrsELKGSDRLATAA 60
                67889*********977766566677665555655454555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 322.42
//
Query:       MMETSP1325-20131115|9160_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.076   13.2   1.0       0.17   12.1   0.1    1.8  2  PF12998.2  Inhibitor of growth proteins N-terminal histone-binding
       0.15   11.6  10.8       0.17   11.4   7.5    1.0  1  PF04216.7  Protein involved in formate dehydrogenase formation
       0.15   10.9   5.4       0.16   10.8   3.3    1.3  1  PF08172.7  CASP C terminal
        0.4    9.1   2.4       0.46    8.9   1.7    1.0  1  PF04388.7  Hamartin protein
        1.3    7.7   6.8        1.3    7.7   4.7    1.1  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        2.7    7.8   5.3        1.4    8.7   2.2    1.8  2  PF10779.4  Haemolysin XhlA
        5.3    5.9   8.5          6    5.7   5.9    1.0  1  PF11067.3  Protein of unknown function (DUF2868)
        6.5    3.8  16.0        7.4    3.6  11.1    1.1  1  PF12128.3  Protein of unknown function (DUF3584)
        8.2    6.5  17.1       0.47   10.5   6.7    2.4  2  PF03993.7  Domain of Unknown Function (DUF349)
        8.3    5.1  14.1         52    2.4   9.7    1.9  1  PF14362.1  Domain of unknown function (DUF4407)
        8.4    5.8   8.5        9.5    5.7   5.9    1.2  1  PF03962.10 Mnd1 family


Domain annotation for each model (and alignments):
>> PF12998.2  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.3   2.8e+03      86     102 ..      14      30 ..       4      33 .. 0.62
   2 ?   12.1   0.1   0.00013      0.17      18      71 ..      53     106 ..      49     110 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 2.3
   PF12998.2  86 qalelvdkhirrLdkdl 102
                   +++ +  +r+L++dl
  MMETSP1325-20131115|9160_1  14 AKAQFQEASVRQLETDL 30 
                 44555566778888776 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00013
   PF12998.2  18 qrnltelreiDakvqkrlkelderiekfikengskkltke.keeellkeiqeelk 71 
                  r+  el+++Dakv+  l+ ++  ie++  e +  +l++  + ++l++ i++ l+
  MMETSP1325-20131115|9160_1  53 ARREAELEALDAKVRRALDAKQAVIERLRAERDG-ALAERdEAQALFNAIEQGLQ 106
                 677789***********************99987.78888899999999999887 PP

>> PF04216.7  Protein involved in formate dehydrogenase formation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   7.5   0.00013      0.17      36     134 ..       5     103 ..       1     111 [. 0.82

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00013
   PF04216.7  36 ladyLrflariaeaqqklleelpapapldaervesalaegvpplaasalerdpawrelleaLlaalaaaalpeaaaaaldelek......adeaelealadalla 134
                  ++ L+ +a+ a++q++ +++l+  +++++ +++++ ae++   ++s+ +r+++    leaL a++++a   +a++a++++l++      a+ +e++al++a+ +
  MMETSP1325-20131115|9160_1   5 AEEALEVAAAKAQFQEASVRQLETDLDHSRHETARKEAEAQRAADQSTARREAE----LEALDAKVRRA--LDAKQAVIERLRAerdgalAERDEAQALFNAIEQ 103
                 5799*******************************9999999999999999999....78888999999..6899999****99655555555555555555554 PP

>> PF08172.7  CASP C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.3   0.00013      0.16       2      56 ..       3      57 ..       2      78 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00013
   PF08172.7  2 eelqeelsslnaeleesqelnekLEnDlatvqaeisasrafnenaslasgvtrri 56
                + ++e+l+ + a+++ ++  +++LE+Dl    +e+++++a ++ a+ +s++ r++
  MMETSP1325-20131115|9160_1  3 AAAEEALEVAAAKAQFQEASVRQLETDLDHSRHETARKEAEAQRAADQSTARREA 57
                67899***************************99888888777777666665554 PP

>> PF04388.7  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.7   0.00037      0.46     552     622 ..       6      82 ..       2     101 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00037
   PF04388.7 552 eslldlalpktaslflkrktkEalkkeaeerlsqeeieeeqvssts......plevlDrlikqgsdahskvlkRlsl 622
                 e+ l++a++k++  +++ +  E+       +   +e e+++   +s       le lD  ++++ da++ v +Rl +
  MMETSP1325-20131115|9160_1   6 EEALEVAAAKAQFQEASVRQLETDLDHSRHETARKEAEAQRAADQStarreaELEALDAKVRRALDAKQAVIERLRA 82 
                 67799999998888888777777665555555666666666665555677779*********************876 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   4.7    0.0011       1.3      70     145 ..       7      84 ..       1     108 [. 0.82

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0011
   PF10186.4  70 erieqirkrieqlkeeieqkrerieelkealaqrrsdle.asaqlekrraeqlaklqeeikrtksklns.lesltaek 145
                 e +e   ++++ +++ ++q+   +++ +++ a++   ++ a +q  +rr+++l+ l ++++r+ +  ++ +e+l+ae+
  MMETSP1325-20131115|9160_1   7 EALEVAAAKAQFQEASVRQLETDLDHSRHETARKEAEAQrAADQSTARREAELEALDAKVRRALDAKQAvIERLRAER 84 
                 555555677788889999999999999999999999999999999999999999999999998777777677777765 PP

>> PF10779.4  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.1   2.6e+03      21      35 ..       5      19 ..       2      24 .. 0.68
   2 ?    8.7   2.2    0.0012       1.4       4      48 ..      19      64 ..      16      80 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 2.1
   PF10779.4 21 aenalEkadaalekq 35
                ae+alE a a+ + q
  MMETSP1325-20131115|9160_1  5 AEEALEVAAAKAQFQ 19
                677788877776655 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0012
   PF10779.4  4 ikerlnrietklke..eekaenalEkadaalekqiknlnkdLskIkk 48
                ++  + ++et+l+   +e+a + +E + aa+++  +  + +L+ +++
  MMETSP1325-20131115|9160_1 19 QEASVRQLETDLDHsrHETARKEAEAQRAADQST-ARREAELEALDA 64
                567799**********999999999999999999.888888887765 PP

>> PF11067.3  Protein of unknown function (DUF2868)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.9    0.0048         6     155     248 ..      11      99 ..       2     109 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0048
   PF11067.3 155 ralarlrldlslpyyqrLlqrlqppsvelgvkdadeaaapkaeaaaaraeeseprsqleqallaalelddawplpaggaasvad.dreqvaqlls 248
                 +a+a  +++++++ + +L   l++++ e+  k+a++++a+++++a ++ae +    +l+ ++++al++++a ++++ ++++ a   r ++++l +
  MMETSP1325-20131115|9160_1  11 VAAA--KAQFQEASVRQLETDLDHSRHETARKEAEAQRAADQSTARREAELE----ALDAKVRRALDAKQAVIERLRAERDGALaERDEAQALFN 99 
                 4444..499999999************************9999999988885....678999999999998444443333322223555555554 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6  11.1     0.006       7.4     609     695 ..       2      89 ..       1     106 [. 0.60

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.006
   PF12128.3 609 lqaleealqsaeakqkqaeeqlkqlnaeleeakravaeakqalkqa.rlelqrlkneqqslkdklekalaerkqqaeeqlqkldaelk 695
                 l+a+eeal+ a ak++ +e+++ ql+  l++++ + a+++++++ a ++   r + e ++l +k+ +al ++++ +e+ + + d +l 
  MMETSP1325-20131115|9160_1   2 LAAAEEALEVAAAKAQFQEASVRQLETDLDHSRHETARKEAEAQRAaDQSTARREAELEALDAKVRRALDAKQAVIERLRAERDGALA 89 
                 6777777777777777777777777777777777777766666654144455666666666666666666666555554444443333 PP

>> PF03993.7  Domain of Unknown Function (DUF349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   2.5      0.84     1e+03      14      31 ..      31      48 ..       1      52 [. 0.67
   2 ?   10.5   6.7   0.00038      0.47       8      47 ..      45      84 ..      41     103 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.84
   PF03993.7 14 ffekrnaafaeldeeree 31
                 ++++++a++e +++r++
  MMETSP1325-20131115|9160_1 31 DHSRHETARKEAEAQRAA 48
                345555555555555554 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00038
   PF03993.7  8 kaardaffekrnaafaeldeereenlekKeaLieeaeala 47
                + a d+  ++r+a+ ++ld++ +++l++K+a+ie+++a  
  MMETSP1325-20131115|9160_1 45 QRAADQSTARREAELEALDAKVRRALDAKQAVIERLRAER 84
                67999*****************************997644 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   9.7     0.042        52     152     236 ..      31      95 ..       1     120 [] 0.39

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.042
   PF14362.1 152 deaqaevnaaeeevqceleGtggtgvaGkGpvykekkealdaaq.aeletlkaqldaaqaeleankrkaaleeeraakvaeeqaan 236
                 d  + e++++e+e+q+ ++                   + +a++ aele+l+a+++ a ++ +  +  ++l++er+ ++ae+++a+
  MMETSP1325-20131115|9160_1  31 DHSRHETARKEAEAQRAAD-------------------QSTARReAELEALDAKVRRALDAKQ--AVIERLRAERDGALAERDEAQ 95 
                 2222222222222222222...................2221112444444444444444444..333333333333333333332 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.9    0.0077       9.5      69     149 ..       9      89 ..       1     105 [. 0.75

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0077
  PF03962.10  69 teleklkkeleelkqrikelqaeiekekkkreeteereelleelkeleeelkklkkeleklakldpekveklkeetevake 149
                  e++++k++ +e++ r  e++ + +  ++ r+e+e ++++ ++ +  e el++l ++++ + +  ++++e+l++e + a++
  MMETSP1325-20131115|9160_1   9 LEVAAAKAQFQEASVRQLETDLDHSRHETARKEAEAQRAADQSTARREAELEALDAKVRRALDAKQAVIERLRAERDGALA 89 
                 445556666666666666666666666788888888888999999999999999999999999999999999998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1404  (0.102692); expected 273.4 (0.02)
Passed bias filter:                      757  (0.0553686); expected 273.4 (0.02)
Passed Vit filter:                        97  (0.00709479); expected 13.7 (0.001)
Passed Fwd filter:                        22  (0.00160913); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.57u 0.44s 00:00:01.01 Elapsed: 00:00:00.93
# Mc/sec: 309.21
//
Query:       MMETSP1325-20131115|9161_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   12.3   0.7      0.071   12.2   0.5    1.1  1  PF03706.8 Uncharacterised protein family (UPF0104)


Domain annotation for each model (and alignments):
>> PF03706.8  Uncharacterised protein family (UPF0104)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.5   5.2e-06     0.071     125     163 ..      14      52 ..       2      78 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.2e-06
   PF03706.8 125 lalllflsseliallllvlllillaalvlllillirlnl 163
                  +++lf  + +i ++l+v+ +++++++ +ll +++r+ +
  MMETSP1325-20131115|9161_1  14 TLVGLFSGERGIEFFLWVICSMVCIVGTVLLTFMARPVF 52 
                 45566789****************************933 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       704  (0.0514921); expected 273.4 (0.02)
Passed bias filter:                      462  (0.0337917); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 498.44
//
Query:       MMETSP1325-20131115|9162_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0025   17.4   1.5      0.072   12.7   0.0    2.2  2  PF13853.1  Olfactory receptor
     0.0033   15.9   0.4      0.021   13.3   0.3    1.8  1  PF03600.11 Citrate transporter
  ------ inclusion threshold ------
        1.2    8.8   6.9         14    5.4   2.4    2.1  2  PF07666.6  M penetrans paralogue family 26
        3.9    6.3  12.0       0.19   10.7   3.4    1.8  2  PF03062.14 MBOAT, membrane-bound O-acyltransferase family


Domain annotation for each model (and alignments):
>> PF13853.1  Olfactory receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   2.1e-05     0.072      44     102 ..       5      64 ..       3      70 .. 0.78
   2 ?    3.1   0.7      0.02        68      54      87 ..     108     141 ..     104     173 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.1e-05
   PF13853.1  44 lkLsCsdtylnellllvvsl.llllgplvfivvsYvqIlravlripsaqgrhKafstCls 102
                 l+++C ++  + +  +++ + l+  + +++i++s+ + +r++l  +  q r +a s C s
  MMETSP1325-20131115|9162_1   5 LEIACDSNEYKYMRAYACLMvLVYPVAMTIILFSWLFMFRKLLDPQEDQVRGRASSECRS 64 
                 677887776655544444441555578899****************************76 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.02
   PF13853.1  54 nellllvvslllllgplvfivvsYvqIlravlri 87 
                 ++l+l+ ++l+ + ++ ++i+v +  Il  v+  
  MMETSP1325-20131115|9162_1 108 KRLFLTSFALVFVQLSSMTIFVLFLSILALVIGK 141
                 5678888999999999999999999999888754 PP

>> PF03600.11  Citrate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.3   6.2e-06     0.021     187     267 ..      36     170 ..      13     172 .. 0.50

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 6.2e-06
                 xxxxxxxxx.................................................xxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
  PF03600.11 187 llllvlgkk.................................................arplllksnai......Lvlvlmlvllvvglvplwialligillalllnykdlkeqlerleaha.gvalsvllliaaaf 267
                 l++++ +++                                                 +rp+ +++ ++      + ++++lv+  ++++ +++++l  ++l++  +++  + q+   +a +   +++v+l+  a +
  MMETSP1325-20131115|9162_1  36 LFSWLFMFRklldpqedqvrgrassecrseedvilqrrehtkrggrlnkapittlalkYRPRYWWFDVLnltkrlFLTSFALVFVQLSSMTIFVLFLSILALVIGKECEPYERQWM--NAFSyVMDWQVVLFMLAIL 170
                 44444444447777777777777777777777777777777777777777777777774444444443221111122222222223333444444444444444445555555555..3333134666666666654 PP

>> PF07666.6  M penetrans paralogue family 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0062        21       6      34 ..      15      43 ..      11      52 .. 0.83
   2 ?    5.4   2.4    0.0042        14      18      79 ..     110     171 ..     105     176 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0062
   PF07666.6  6 kkikklsltiiilyllatvlllvsllayi 34
                k  ++ + ++++ y +a+ ++l+s+l + 
  MMETSP1325-20131115|9162_1 15 KYMRAYACLMVLVYPVAMTIILFSWLFMF 43
                677899999******99999999998775 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0042
   PF07666.6  18 lyllatvlllvsllayivllskskllskeyeeesslleaelligvllillidifyivnfile 79 
                 l+l+ ++l++v l +++++ + +++l   + +e +++e +++ +++ ++  ++++++ +il+
  MMETSP1325-20131115|9162_1 110 LFLTSFALVFVQLSSMTIFVLFLSILALVIGKECEPYERQWMNAFSYVMDWQVVLFMLAILM 171
                 67777888888888888888888888888888889999999888888888888555555554 PP

>> PF03062.14  MBOAT, membrane-bound O-acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.4       0.1   3.6e+02     145     172 ..      16      43 ..       9      48 .. 0.62
   2 ?   10.7   3.4   5.5e-05      0.19      97     173 ..      97     173 ..      84     178 .. 0.86

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.1
  PF03062.14 145 imevalllrysvaaailvvlayslylff 172
                 +m    +l+ +v   +++ +++s++++f
  MMETSP1325-20131115|9162_1  16 YMRAYACLMVLVYPVAMTIILFSWLFMF 43 
                 4555556666666666666666666666 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 5.5e-05
  PF03062.14  97 esklkswdyttksllaravrllflgflykvlisyllsklpvklltsdaimevalllrysvaaailvvlayslylffd 173
                 + + +    +tk+l+ + + l+f+ + ++ ++  +ls l++ +++  + +e+ ++  +s+++ + vvl+++ +l++d
  MMETSP1325-20131115|9162_1  97 RYWWFDVLNLTKRLFLTSFALVFVQLSSMTIFVLFLSILALVIGKECEPYERQWMNAFSYVMDWQVVLFMLAILMLD 173
                 4444444455599*********************************************************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       662  (0.0484201); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 841.07
//
Query:       MMETSP1325-20131115|9163_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-06   25.7   1.3    4.6e-06   25.2   0.9    1.2  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
      0.099   11.0   0.2       0.12   10.6   0.1    1.0  1  PF05667.6  Protein of unknown function (DUF812)


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.9   6.7e-10   4.6e-06       9      65 ..     122     184 ..     114     198 .. 0.74

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 6.7e-10
                 HHHHH.----TTT-..--------HHHHHHHHHHHHHHHHHHHHH---TTT---......--- CS
  PF00909.16   9 lvifm.qagfalle..aglvrsknvlnilvknlldlavvvllyvlfGyslafgksk...gvsg 65 
                   +fm  a f++l    g+v+  n  +++v+ ll+ a++vl ++++Gy++afg++    ++sg
  MMETSP1325-20131115|9163_1 122 GGLFMyIAKFGYLAriVGMVSPANIKATIVTDLLASAMGVLCWWAVGYGIAFGSDSypeSGSG 184
                 34455455555554228************************************9854444444 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   1.8e-05      0.12     397     450 ..      48     101 ..      38     115 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 1.8e-05
   PF05667.6 397 akLqalveasserlleLaqqWeahrkpLidelrelkekarekedetkrkleeik 450
                 +k ++++++   r + ++++Wea r++   e ++l+++++ k++etk   e +k
  MMETSP1325-20131115|9163_1  48 KKVNSVFNDVYFRWKAMSSKWEAERSAWASEDEALHTMKSLKHNETKPISEIVK 101
                 899*************************************99999986555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       639  (0.0467379); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.50
# Mc/sec: 963.34
//
Query:       MMETSP1325-20131115|9165_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.31s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 585.16
//
Query:       MMETSP1325-20131115|9167_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   13.7   0.0      0.036   13.5   0.0    1.1  1  PF07039.6 SGF29 tudor-like domain
       0.12   12.0   0.0       0.16   11.6   0.0    1.1  1  PF09038.5 Tumour suppressor p53-binding protein-1 Tudor


Domain annotation for each model (and alignments):
>> PF07039.6  SGF29 tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.2e-06     0.036      58     117 ..      28      84 ..      16      92 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5.2e-06
   PF07039.6  58 lPkklsketsklaefpkgskVLAlYPdTtaFYkAtVvatpkkkedeykleFeddeeedke 117
                 lP+  ++ +   a+f+ g++VL+ +     +Y++ ++    +++++y++ ++d ++e ++
  MMETSP1325-20131115|9167_1  28 LPS-FEDAEAAVAAFTVGQRVLGCFDANDEWYPGSISLC--HEDGTYDIAYDDGDSETNK 84 
                 777.788889999************************99..9**********99887755 PP

>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.3e-05      0.16       5      41 ..      43      79 ..      39      84 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.3e-05
                -----EEE-ST---BB---EEEE-----EEEE----- CS
   PF09038.5  5 vglrvvakwssngyfysgkitkdagegkykllfddgy 41
                vg rv+  + +n  +y g i     +g y + +ddg 
  MMETSP1325-20131115|9167_1 43 VGQRVLGCFDANDEWYPGSISLCHEDGTYDIAYDDGD 79
                89*********************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 484.48
//
Query:       MMETSP1325-20131115|9166_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1359.57
//
Query:       MMETSP1325-20131115|9169_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 781.42
//
Query:       MMETSP1325-20131115|9168_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|9172_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.2   4.9       0.14   11.8   3.4    1.2  1  PF09596.5 MamL-1 domain
       0.35    8.7  15.1       0.33    8.8  10.5    1.0  1  PF04094.9 Protein of unknown function (DUF390)


Domain annotation for each model (and alignments):
>> PF09596.5  MamL-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.4   2.1e-05      0.14      10      42 ..      31      63 ..      26      67 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.1e-05
   PF09596.5 10 RLRrRielcRrhhvsCesRYeqaqaeqlerere 42
                R  +R e+ R+++ +  +RY++a++e+   er+
  MMETSP1325-20131115|9172_1 31 RVAKRKEVLRQRQAEEAARYDAARQEEAAAERR 63
                556899**********************99998 PP

>> PF04094.9  Protein of unknown function (DUF390)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  10.5   4.9e-05      0.33     251     301 ..      19      66 ..       3      74 .] 0.61

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 4.9e-05
   PF04094.9 251 eaeeaaqeavrvrqaeeaareea.rlrraeeavreakaaradeaiasapdps 301
                  ae aa+ a rvr a+   r+e  r r+aeea+r  +aar++ea+a+    s
  MMETSP1325-20131115|9172_1  19 AAEAAAEAAKRVRVAK---RKEVlRQRQAEEAARY-DAARQEEAAAERRAIS 66 
                 3455555556666654...4555588888888887.7888888877644333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1129  (0.0825775); expected 273.4 (0.02)
Passed bias filter:                      551  (0.0403013); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 322.42
//
Query:       MMETSP1325-20131115|9170_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1255.69
//
Query:       MMETSP1325-20131115|9173_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-12   47.4   0.2    9.3e-12   45.2   0.0    1.9  2  PF00005.22 ABC transporter
    0.00017   20.8   0.1     0.0014   17.7   0.0    1.9  2  PF02463.14 RecF/RecN/SMC N terminal domain
    0.00024   20.8   0.0     0.0015   18.3   0.0    2.1  1  PF13558.1  Putative exonuclease SbcCD, C subunit
     0.0069   16.2   0.0      0.012   15.4   0.0    1.4  1  PF13304.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   2.7e-15   9.3e-12      86     118 .]       2      34 ..       1      34 [. 0.96
   2 ?    0.3   0.1      0.23   7.8e+02      64      65 ..      98     139 ..      57     154 .. 0.49

  Alignments for each domain:
  == domain 1    score: 45.2 bits;  conditional E-value: 2.7e-15
                 ---------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22  86 rvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 ++++LSgGqk++++lA+a+++ p+ll+LDEPtn
  MMETSP1325-20131115|9173_1   2 KIKGLSGGQKVKLVLAAAMWQCPHLLVLDEPTN 34 
                 5899****************************8 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.23
                 -........................................- CS
                 x........................................x RF
  PF00005.22  64 k........................................t 65 
                 +                                        +
  MMETSP1325-20131115|9173_1  98 TekdvlmekfhetaavvggtsntnevrdqkllinektgrvlS 139
                 233333333333344444444333333333333333334444 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   4.1e-07    0.0014     136     203 ..       5      66 ..       2      72 .. 0.92
   2 ?    0.6   0.3     0.069   2.3e+02      69     127 ..      81     147 ..      69     154 .. 0.54

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 4.1e-07
                 G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemle 203
                  LSgG+k    + L++A  + +   l +lDe    LD +   ++a+ +k+      +i+is+++e+++
  MMETSP1325-20131115|9173_1   5 GLSGGQK----VKLVLAAAMWQCPHLLVLDEPTNYLDREALGALASAIKAWG--GGVIMISHNKEFYS 66 
                 59***99....79999*********************************999..89*******99876 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.069
                 -------EEEEEEEEE----E..........EEEEEEEE----..EEEEE---EE-...HHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxx...xxxxxxxx RF
  PF02463.14  69 kskakvksaeveitfdnedke...lvieeeevsitrrvkrkge..seykingkevt...kkevaell 127
                 k+k ++++ ++++t ++++k+   ++ +e+  ++  + ++++   ++  in+k+ +   kke++++ 
  MMETSP1325-20131115|9173_1  81 KKKGEAQETTLKLTREKTEKDvlmEKFHETAAVVGGTSNTNEVrdQKLLINEKTGRvlsKKEIRQMA 147
                 5566677777777766666664433333333444444443332336777777665411146666555 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   4.3e-07    0.0015      30      89 ..       3      49 ..       1      50 [. 0.85

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 4.3e-07
   PF13558.1 30 tgtlSGGEkqflvylalaaAlaalyssaegrepsirlvfLDEAFsklDeeniasllellr 89
                +++lSGG+k   v l+laaA+ ++          + l++LDE+++ lD e + +l+++++
  MMETSP1325-20131115|9173_1  3 IKGLSGGQK---VKLVLAAAMWQC----------PHLLVLDEPTNYLDREALGALASAIK 49
                789******...888888877654..........668***************99998876 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.6e-06     0.012     237     298 ..       6      61 ..       2      66 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.6e-06
   PF13304.1 237 lSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHS 298
                 lS G+k  l l++a ++ +    +l++DEp n+L+ ++l +l++ +   + +g+ +i+ +H+
  MMETSP1325-20131115|9173_1   6 LSGGQKVKLVLAAAMWQCP---HLLVLDEPTNYLDREALGALASAI---KAWGGGVIMISHN 61 
                 79999999*********99...89************9999999655...66**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       809  (0.059172); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 687.84
//
Query:       MMETSP1325-20131115|9175_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00032   19.3   0.1    0.00034   19.1   0.1    1.0  1  PF00888.17 Cullin family
  ------ inclusion threshold ------
      0.062   13.4   0.1      0.067   13.3   0.0    1.0  1  PF03015.14 Male sterility protein
      0.075   11.7   0.0      0.078   11.6   0.0    1.0  1  PF03970.8  Herpesvirus UL37 tegument protein


Domain annotation for each model (and alignments):
>> PF00888.17  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   7.5e-08   0.00034       1      34 [.      18      51 ..      18      52 .] 0.95

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 7.5e-08
  PF00888.17  1 weklkraiekilkksvsslsyeelYsavynivpe 34
                w++l +ai++i +++ ssls+eelY+++yn+v++
  MMETSP1325-20131115|9175_1 18 WKQLSSAIHEIHNQNASSLSFEELYRNAYNLVLH 51
                9*****************************9776 PP

>> PF03015.14  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.5e-05     0.067      46      83 ..       8      45 ..       3      49 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.5e-05
  PF03015.14 46 iFdnknteeLreklseedkelfefdmkeldwdeyftna 83
                ++d+++ +e++++ls +++e+ + + ++l ++e ++na
  MMETSP1325-20131115|9175_1  8 QMDSTQAQEIWKQLSSAIHEIHNQNASSLSFEELYRNA 45
                78999*****************************9986 PP

>> PF03970.8  Herpesvirus UL37 tegument protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.7e-05     0.078      48      92 ..       6      51 ..       2      52 .] 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.7e-05
   PF03970.8 48 ttkisveevrdlwrdllkvllevykatklp.eaallaeNlpglllw 92
                  ++  ++++++w++l +++ e++++  +      l++N   l+l+
  MMETSP1325-20131115|9175_1  6 HCQMDSTQAQEIWKQLSSAIHEIHNQNASSlSFEELYRNAYNLVLH 51
                568999******************9987651445678888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       682  (0.049883); expected 273.4 (0.02)
Passed bias filter:                      606  (0.0443242); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.46s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 214.85
//
Query:       MMETSP1325-20131115|9171_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-35  121.7   0.0    1.8e-35  121.2   0.0    1.2  1  PF00179.21 Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.092   12.3   0.1       0.14   11.7   0.0    1.3  1  PF05743.8  UEV domain
       0.13   12.0   0.0       0.15   11.8   0.0    1.3  1  PF05773.17 RWD domain


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.0     4e-39   1.8e-35       1     138 [.      95     228 ..      95     230 .. 0.89

  Alignments for each domain:
  == domain 1    score: 121.2 bits;  conditional E-value: 4e-39
                 HHHHHHHHHHHS-TTCEEEEEEETTECCEEEEEE---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-----B-HGGGSTTT--TT--HHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
  PF00179.21   1 rlqkelkelskkkpegikaevvedsnllewkvvikgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvdetGeicldiLkeekWspaltlesvLlsiqsllaepnpesplnkeaakllkknreeykkkvke 138
                 r+qk+++el+  + ++i+    ++++l++++v+i++ + + + g+++k++i + ++YP+kPPkv ++tki+HPn++ +G++cl+iL+e+ W+p+l+++ v+++++ l+ epnp +pln+eaa+l+++n+e++k++v++
  MMETSP1325-20131115|9171_1  95 RIQKDIAELDGGSVAQID--FPQANDLTNFNVTITP-DSGFWLGATYKFSIAITSDYPHKPPKVLCHTKIYHPNINLEGNVCLNILRED-WKPVLDINAVIYGLIYLFYEPNPGDPLNHEAAALFRDNPEQFKRTVTR 228
                 567777765444444443..334469********98.**************************************************66.********************************************9965 PP

>> PF05743.8  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     3e-05      0.14      50     118 ..     140     201 ..     117     204 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3e-05
                 E-EEEE--TTTTTS--EEEE-GCC--TSGGGGGB-----B--HHHHS.--TTT--HHHHHHHHHH----- CS
   PF05743.8  50 iPiliwvpesyPveaPivyvkptksmvikknenvdaqGrvylpyLee.Wkreksnlvslvqelaqafeee 118
                 +   i + ++yP ++P v  + +       + n++ +G+v l++L+e Wk+   ++  ++  l++ f e 
  MMETSP1325-20131115|9171_1 140 F--SIAITSDYPHKPPKVLCHTKIY-----HPNINLEGNVCLNILREdWKP-VLDINAVIYGLIYLFYEP 201
                 4..45689********998765544.....669************862655.888888888777777665 PP

>> PF05773.17  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.4e-05      0.15      49      94 ..     119     183 ..       5     199 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.4e-05
                 x.................xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx RF
  PF05773.17  49 p.................sleleirlpedYPeeaPiitlsstelsl..kelrkrleekleelaee 94 
                                   ++++ i ++ dYP+++P++   ++      + + + + + l+e ++ 
  MMETSP1325-20131115|9171_1 119 LtnfnvtitpdsgfwlgaTYKFSIAITSDYPHKPPKVLCHTKIYHPniNLEGNVCLNILREDWKP 183
                 0333344444444445559999**************99555433332222444444555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       782  (0.0571972); expected 273.4 (0.02)
Passed bias filter:                      513  (0.0375219); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 1124.44
//
Query:       MMETSP1325-20131115|9176_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.041   12.7   0.1      0.051   12.4   0.1    1.1  1  PF08602.5 Mgr1-like, i-AAA protease complex subunit
      0.042   11.9   0.1       0.07   11.2   0.1    1.5  1  PF05925.7 Enterobacterial virulence protein IpgD


Domain annotation for each model (and alignments):
>> PF08602.5  Mgr1-like, i-AAA protease complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.4e-06     0.051     213     334 ..      19     145 ..       7     156 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.4e-06
   PF08602.5 213 kiikWfGpleykPmsfsefldklekyldmvef...vqnkrrake..tslgllnkikaktkkleiyleeneenrkrikklleeelkevnelnkaerldlilkgksqlyneealrsvileedhevdeDi 334
                  i++ +G++  +    ++ +++le+y+++      +q+kr  k+   +  ++++++++ k+l+  +     + ++  + l e+   v e+n  + ++ +  +  + ++  + ++ il++ h+ d++ 
  MMETSP1325-20131115|9176_1  19 SIANSIGSYGIQDEINNQSIKHLENYFNTYRAwaqSQSKRSGKDgiPTRAFVEELESRLKTLRRIITDATGSGRKSIEVLTESAALVREINGCRFTSCKSAKDRTGMSVTLEQTRILNDHHRLDDEV 145
                 5666667777777777788999******99883334444444432234568999*******98777777777777777888***********99999998888889*************99999875 PP

>> PF05925.7  Enterobacterial virulence protein IpgD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1     1e-05      0.07     446     482 ..     102     138 ..       6     151 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1e-05
   PF05925.7 446 allayeidavpawncksGkdrtGmqdaeikreiiskh 482
                 a l  ei+      cks kdrtGm  +  +  i++ h
  MMETSP1325-20131115|9176_1 102 AALVREINGCRFTSCKSAKDRTGMSVTLEQTRILNDH 138
                 6788999999999***********8776666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       677  (0.0495173); expected 273.4 (0.02)
Passed bias filter:                      567  (0.0414716); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 993.49
//
Query:       MMETSP1325-20131115|9181_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|9182_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        86  (0.00629023); expected 273.4 (0.02)
Passed bias filter:                       84  (0.00614394); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|9183_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.4   0.1     0.0016   18.1   0.1    1.1  1  PF13180.1  PDZ domain
     0.0027   17.7   0.1     0.0033   17.4   0.1    1.1  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)


Domain annotation for each model (and alignments):
>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1   2.3e-07    0.0016       3      44 ..      28      72 ..      26      73 .] 0.94

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 2.3e-07
   PF13180.1  3 iGvsvsqlen..trgvlvvsVkessPaakag.lkpGDiilkvdgk 44
                +G+ ++++e+   +gv+vv+  e++ a+ +g ++pGD ++ v g+
  MMETSP1325-20131115|9183_1 28 LGIVFEEVEPgaPQGVRVVELVEGGNAETSGkVAPGDLLVGVTGI 72
                89999999999999**************************99886 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.1   4.9e-07    0.0033       9      54 ..      25      71 ..      21      73 .] 0.88

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 4.9e-07
                TSH---EEEESSTTSSSSEEEEESTTTHHTTTTS.BSTTCEEEEETT CS
  PF00595.19  9 rgglGfslkggsdkrdkgifvsevvpggaaeagg.lkeGDkIlsvNg 54
                r++lG+   + +    +g+ v e+v+gg ae++g + +GD +++v g
  MMETSP1325-20131115|9183_1 25 RKPLGIVFEEVEPGAPQGVRVVELVEGGNAETSGkVAPGDLLVGVTG 71
                56788888888887789**************************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 330.06
//
Query:       MMETSP1325-20131115|9186_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.063   13.6   0.2      0.091   13.0   0.2    1.2  1  PF00653.16 Inhibitor of Apoptosis domain
       0.12   11.9   0.0       0.12   11.8   0.0    1.2  1  PF12487.3  Protein of unknown function (DUF3703)
       0.14   10.5   0.1       0.16   10.3   0.1    1.1  1  PF05975.7  Bacterial ABC transporter protein EcsB


Domain annotation for each model (and alignments):
>> PF00653.16  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2     2e-05     0.091      33      63 ..      22      52 ..      14      58 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2e-05
  PF00653.16 33 tkdnvrCfyCkleldgweeeddpleeHlkhs 63
                +++ +rCf+C+++  ++++  + +++H k +
  MMETSP1325-20131115|9186_1 22 EDKATRCFVCGVNAAEFNRRASGFDKHVKSQ 52
                37899****************9999999965 PP

>> PF12487.3  Protein of unknown function (DUF3703)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.7e-05      0.12      43      69 ..      50      76 ..      12      80 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.7e-05
   PF12487.3 43 lilHtrvHlamlrlalrqrdarEvlGQ 69
                  +H + H+ ++r+ lr++d +E  GQ
  MMETSP1325-20131115|9186_1 50 KSQHNMWHYLFFRHYLRKKDENEYTGQ 76
                5679999******************** PP

>> PF05975.7  Bacterial ABC transporter protein EcsB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   3.5e-05      0.16     261     280 ..      50      69 ..      36      76 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 3.5e-05
   PF05975.7 261 knkkktflylylrsflRsgd 280
                 k++++++ yl++r +lR++d
  MMETSP1325-20131115|9186_1  50 KSQHNMWHYLFFRHYLRKKD 69 
                 4579*************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 391.71
//
Query:       MMETSP1325-20131115|9189_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 543.79
//
Query:       MMETSP1325-20131115|9188_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.33s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 1276.32
//
Query:       MMETSP1325-20131115|9192_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.5e-16   59.1   0.6    5.9e-16   59.0   0.4    1.0  1  PF10513.4 Enhancer of polycomb-like


Domain annotation for each model (and alignments):
>> PF10513.4  Enhancer of polycomb-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   0.4   4.3e-20   5.9e-16      69     138 ..       6      76 ..       1      83 [. 0.86

  Alignments for each domain:
  == domain 1    score: 59.0 bits;  conditional E-value: 4.3e-20
   PF10513.4  69 kekkknksekltiptPdfrvve.yeksyapkfkkPssyiryseksvedldeeveYDmDeeDekWLeelnkk 138
                  ++k+++++kl+iptP +++v+ yeks +p+fk P syir+++ks ed  +++eY++  +D +WL++ln  
  MMETSP1325-20131115|9192_1   6 VNEKAAQKKKLNIPTPMINEVDtYEKSMTPDFKPPVSYIRMTKKSDEDSADMLEYNLEHKDVAWLQSLNTL 76 
                 3444444689*********999899999999*************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|9190_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.4    5.6  23.3        3.3    5.6  16.1    1.0  1  PF09770.4 Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  16.1   0.00024       3.3     174     314 ..       7     109 ..       1     167 [. 0.44

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.00024
   PF09770.4 174 lpqppaqvlpqqspprqaalpqqakpelpsqypqppq.ql.qqevq.qqlqqapsqapaqaplpaqlpqqlqnlqqqqlpqlsqqmppqpvqppqqqqqqvlklpqaqppplqqlsaspqlaqqqlaslplpqqpqqkalvqqe 314
                 ++++p+ ++p+++p+  ++++ q + ++p +++  +q q+ ++ +q q++ ++++++ a++ +p  +++++    q ++++ + +++ + + p                                         +q k + +++
  MMETSP1325-20131115|9190_1   7 PMNQPQGGMPMNQPQGGMPMN-QPQGGMPMNQQV-AQlQYqNMLMQqQMMLNQQQMQAAMMGQPGGMQGNMMSGMQMPVQNMPGGQFAPAMVPLG---------------------------------------QQRKVIPNEQ 109
                 333333333333333322222.111112211111.111111111111222222222222222222222222222233333333333333333333.......................................3322222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       577  (0.042203); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.52
# Mc/sec: 870.98
//
Query:       MMETSP1325-20131115|9191_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 450.52
//
Query:       MMETSP1325-20131115|9194_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.036   13.9   0.2      0.063   13.1   0.1    1.3  1  PF01091.13 PTN/MK heparin-binding protein family, C-terminal domain


Domain annotation for each model (and alignments):
>> PF01091.13  PTN/MK heparin-binding protein family, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   4.6e-06     0.063      13      30 ..      80      97 ..      77     100 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.6e-06
  PF01091.13 13 eCdaktgtktRtgtLkka 30
                +Cd +t+t++ tg Lk+ 
  MMETSP1325-20131115|9194_1 80 DCDGSTNTRSHTGDLKRT 97
                8***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 673.98
//
Query:       MMETSP1325-20131115|9195_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.45
# Mc/sec: 553.82
//
Query:       MMETSP1325-20131115|9193_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.037   12.2   0.0      0.042   12.0   0.0    1.0  1  PF06872.6 EspG protein


Domain annotation for each model (and alignments):
>> PF06872.6  EspG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.1e-06     0.042     264     322 ..      34      92 ..      17     104 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.1e-06
   PF06872.6 264 lcdPe.fisAicsaFyqslnvpallleHirislaseyieerslvlPnAvvdiaisasseg 322
                  cdP+ +++ ++sa  q l   a++l H ++ l s y       +P A  + +i+ s+e 
  MMETSP1325-20131115|9193_1  34 ACDPNpAVAVMASAMAQWLGAKASILSHSKAVLRSRYTRVEGIAVPSAAAS-SITRSTEA 92 
                 599984667789**********************************99864.67777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 560.85
//
Query:       MMETSP1325-20131115|9196_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   14.5   2.7      0.037   13.7   0.8    1.8  2  PF06428.6  GDP/GTP exchange factor Sec2p
      0.033   14.2   1.0      0.043   13.8   0.6    1.4  1  PF05008.10 Vesicle transport v-SNARE protein N-terminus
      0.055   13.0   0.1      0.094   12.3   0.1    1.4  1  PF07558.6  Shugoshin N-terminal coiled-coil region
        1.6    7.5   4.2        1.6    7.5   2.9    1.0  1  PF07466.6  Protein of unknown function (DUF1517)


Domain annotation for each model (and alignments):
>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.8   1.1e-05     0.037      51      88 ..       6      43 ..       2      50 .. 0.87
   2 ?    1.6   0.1     0.062   2.1e+02      68      84 ..      49      65 ..      35      71 .. 0.50

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.1e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT----- CS
   PF06428.6 51 eknekleeqLkekelllevlqaqlkeLKelleslekek 88
                ++ +++++qL e+e +l+ +  q++eL++ + +l  e+
  MMETSP1325-20131115|9196_1  6 QRVAQSKAQLIEAEHVLARMRLQVTELSATTARLRTEQ 43
                7899************************9999988777 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.062
                HHHHHHHHHHHHCTTT- CS
   PF06428.6 68 evlqaqlkeLKellesl 84
                 +l a+ + LK+ll+ +
  MMETSP1325-20131115|9196_1 49 LSLDADATRLKSLLHVI 65
                34444555555555544 PP

>> PF05008.10  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.6   1.3e-05     0.043      21      60 ..       2      36 ..       1      55 [. 0.81

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.3e-05
  PF05008.10 21 eerkaalreiekkldeaeellkqMelEvrnlpsserakyk 60
                e++ + +++ +++l eae +l +M+l v +l++      +
  MMETSP1325-20131115|9196_1  2 EQQGQRVAQSKAQLIEAEHVLARMRLQVTELSA-----TT 36
                6888999***********************962.....23 PP

>> PF07558.6  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   2.7e-05     0.094      18      43 ..      24      49 ..      23      51 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.7e-05
   PF07558.6 18 alsikiselekevskLlnENvnLRel 43
                +++++++el  ++ +L++E+++L+ l
  MMETSP1325-20131115|9196_1 24 RMRLQVTELSATTARLRTEQADLTAL 49
                5789*******************976 PP

>> PF07466.6  Protein of unknown function (DUF1517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   2.9   0.00047       1.6     100     146 ..      18      68 ..       1      71 [. 0.70

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00047
   PF07466.6 100 sndkvsvvklqvg.Llasakel...qkdLrrlAekaDTstaeglarvlqea 146
                 +++    ++lqv  L a++  l   q dL++l+  aD +  ++l +v+qe 
  MMETSP1325-20131115|9196_1  18 AEHVLARMRLQVTeLSATTARLrteQADLTALSLDADATRLKSLLHVIQER 68 
                 334445578888645566655544499**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      441  (0.0322557); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.55
# Mc/sec: 313.70
//
Query:       MMETSP1325-20131115|9197_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   14.2   0.9      0.033   13.7   0.6    1.2  1  PF13792.1 Sulfate transporter N-terminal domain with GLY motif


Domain annotation for each model (and alignments):
>> PF13792.1  Sulfate transporter N-terminal domain with GLY motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.6   2.4e-06     0.033      21      72 ..      37      87 ..      23      91 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.4e-06
   PF13792.1 21 lAGltvalvliPqalayAllaglppiyGLyaaivplliyalfGssrqlvvGp 72
                 +G+tv ++ +P+ala+Al+  lp    + +a + +  y l+      ++Gp
  MMETSP1325-20131115|9197_1 37 QCGVTVLTLPLPLALALALALPLPLPLVVATATLTV-RYLLLVAVSIPAHGP 87
                59*****************99999888777766654.444444444555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 537.96
//
Query:       MMETSP1325-20131115|9198_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 680.57
//
Query:       MMETSP1325-20131115|9199_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 364.45
//
Query:       MMETSP1325-20131115|9201_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-06   28.3   0.1    0.00021   21.2   0.0    1.8  2  PF13499.1  EF-hand domain pair
     0.0021   17.1   0.1       0.59    9.4   0.0    2.5  2  PF00036.27 EF hand
  ------ inclusion threshold ------
      0.077   12.0   0.0      0.087   11.8   0.0    1.1  1  PF06866.6  Protein of unknown function (DUF1256)


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   7.7e-05      0.35      35      59 ..       9      33 ..       4      34 .. 0.74
   2 !   21.2   0.0   4.5e-08   0.00021       2      66 .]      16      85 ..      15      85 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 7.7e-05
   PF13499.1 35 deevrevldyifkelDkngdGvlsf 59
                +e+ r+++ + f++lD   dGv++ 
  MMETSP1325-20131115|9201_1  9 PEGRRDLIKQAFANLDVQTDGVITV 33
                5667778888888888888888875 PP

  == domain 2    score: 21.2 bits;  conditional E-value: 4.5e-08
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels........deevrevldyifkelDkngdGvlsfeEflqai 66
                +k+aF  lD+++dg ++++    + +  g +          d  ++++l + ++++    dGv+s+++f++++
  MMETSP1325-20131115|9201_1 16 IKQAFANLDVQTDGVITVQAVITVQDLKGRYSVkgqeglteDMALQKFLSQ-WDCYSV--DGVVSLDDFMEYY 85
                689**************************9999998555543333334333.779999..69*********97 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00013      0.59       2      20 ..      16      34 ..      15      39 .. 0.91
   2 !    5.4   0.1    0.0026        12      14      26 ..      73      85 ..      72      88 .. 0.89

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00013
                HHHHHHHHCTTTSSEBEHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfe 20
                +k+aF+ +D+  dG I+++
  MMETSP1325-20131115|9201_1 16 IKQAFANLDVQTDGVITVQ 34
                89**************986 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0026
                SSEBEHHHHHHHH CS
  PF00036.27 14 dGkIsfeEfkeal 26
                dG +s+++f+e++
  MMETSP1325-20131115|9201_1 73 DGVVSLDDFMEYY 85
                9*********975 PP

>> PF06866.6  Protein of unknown function (DUF1256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.9e-05     0.087      88     145 ..      28      86 ..      14      93 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.9e-05
   PF06866.6  88 pfiiaidaclgeeknigkivik.nkplkpgkavnkkLpkvGdlsivgivnvsgsleylv 145
                   +i++ a ++ ++  g+ ++k +++l+  +a++k L +    s+ g+v + +++ey +
  MMETSP1325-20131115|9201_1  28 DGVITVQAVITVQDLKGRYSVKgQEGLTEDMALQKFLSQWDCYSVDGVVSLDDFMEYYF 86 
                 569**************999974689*******************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|9203_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        68  (0.00497367); expected 273.4 (0.02)
Passed bias filter:                       68  (0.00497367); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.54
# Mc/sec: 142.01
//
Query:       MMETSP1325-20131115|9205_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 228.22
//
Query:       MMETSP1325-20131115|9202_1  [L=461]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-13   48.0  56.9    0.00012   21.9  10.1    5.8  5  PF07974.8  EGF-like domain
     0.0015   18.3  26.0     0.0066   16.3   1.6    5.3  4  PF12661.2  Human growth factor-like EGF
  ------ inclusion threshold ------
      0.025   14.3  44.9       0.29   10.9   7.1    4.9  4  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   3.1   2.5e-07    0.0011       5      27 ..      79     101 ..      76     104 .. 0.88
   2 !   21.9  10.1   2.7e-08   0.00012       1      32 []     126     157 ..     126     157 .. 0.92
   3 !   16.4   1.9   1.5e-06    0.0066       6      32 .]     185     211 ..     181     211 .. 0.90
   4 !    5.4   0.7    0.0041        19       1      15 [.     216     229 ..     216     231 .. 0.82
   5 !    8.4   2.3   0.00048       2.2      21      32 .]     267     278 ..     263     278 .. 0.94

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 2.5e-07
   PF07974.8   5 gliCgghGtCvkqcgkCvCdsgy 27 
                 +++C+ +G+C+ ++g+C+C+ gy
  MMETSP1325-20131115|9202_1  79 DNDCSDRGICDYSTGICSCSTGY 101
                 468********88********98 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 2.7e-08
   PF07974.8   1 CsadgliCgghGtCvkq.cgkCvCdsgyqGktC 32 
                 C+ +++ C ghGtC+ + +  C+C++gy+G++C
  MMETSP1325-20131115|9202_1 126 CPGETS-CTGHGTCEGTpTYACQCSNGYTGADC 157
                 887744.***********9************** PP

  == domain 3    score: 16.4 bits;  conditional E-value: 1.5e-06
   PF07974.8   6 liCgghGtCvkqcgkCvCdsgyqGktC 32 
                 ++C   G C++++g C+C +g+ G+ C
  MMETSP1325-20131115|9202_1 185 AECADMGLCDRTTGACSCMDGFEGAAC 211
                 469999********************* PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.0041
   PF07974.8   1 CsadgliCgghGtCv 15 
                 C+ d + C+ hG C 
  MMETSP1325-20131115|9202_1 216 CPGD-PACNDHGDCL 229
                 8865.66*******6 PP

  == domain 5    score: 8.4 bits;  conditional E-value: 0.00048
   PF07974.8  21 CvCdsgyqGktC 32 
                 C+Cd+gy+G +C
  MMETSP1325-20131115|9202_1 267 CDCDDGYFGYDC 278
                 ***********9 PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.049   2.2e+02       2       8 ..      95     101 ..      94     102 .. 0.90
   2 !   16.3   1.6   1.4e-06    0.0066       2      13 .]     146     157 ..     145     157 .. 0.97
   3 !    9.9   0.3   0.00017      0.75       2      13 .]     200     211 ..     199     211 .. 0.96
   4 ?    2.0   3.1     0.054   2.5e+02       2      10 ..     267     275 ..     266     278 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.049
   PF12661.2   2 CqCppGy 8  
                 C C  Gy
  MMETSP1325-20131115|9202_1  95 CSCSTGY 101
                 ******9 PP

  == domain 2    score: 16.3 bits;  conditional E-value: 1.4e-06
   PF12661.2   2 CqCppGyTGdnC 13 
                 CqC  GyTG++C
  MMETSP1325-20131115|9202_1 146 CQCSNGYTGADC 157
                 ************ PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00017
   PF12661.2   2 CqCppGyTGdnC 13 
                 C C  G++G+ C
  MMETSP1325-20131115|9202_1 200 CSCMDGFEGAAC 211
                 **********99 PP

  == domain 4    score: 2.0 bits;  conditional E-value: 0.054
   PF12661.2   2 CqCppGyTG 10 
                 C C+ Gy G
  MMETSP1325-20131115|9202_1 267 CDCDDGYFG 275
                 *******99 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.6   0.00077       3.5       3      27 ..      82     102 ..      79     105 .. 0.82
   2 ?    7.3   6.0   0.00088         4       3      32 ..     132     158 ..     125     170 .. 0.81
   3 ?   10.9   7.1   6.4e-05      0.29       6      33 ..     190     213 ..     182     228 .. 0.86
   4 ?    0.1   4.1      0.16   7.1e+02      19      32 ..     266     279 ..     215     287 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00077
                 STT-B-CC--B-S----BSBSTTEE CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenve 27 
                 C+++g     Cd stg C+C  +++
  MMETSP1325-20131115|9202_1  82 CSDRG----ICDYSTGICSCSTGYD 102
                 55555....9***********9986 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.00088
                 STT-B-CC--B-S.----BSBSTTEE---S- CS
  PF00053.19   3 CnphgsssssCds.stgqClCkenveGrkCd 32 
                 C +hg    +C+   t++C+C ++++G +C 
  MMETSP1325-20131115|9202_1 132 CTGHG----TCEGtPTYACQCSNGYTGADCS 158
                 55555....9998789**************6 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 6.4e-05
                 -B-CC--B-S----BSBSTTEE---S-E CS
  PF00053.19   6 hgsssssCdsstgqClCkenveGrkCdr 33 
                  g     Cd++tg+C+C +++eG  Cd 
  MMETSP1325-20131115|9202_1 190 MG----LCDRTTGACSCMDGFEGAACDT 213
                 44....7*******************95 PP

  == domain 4    score: 0.1 bits;  conditional E-value: 0.16
                 -BSBSTTEE---S- CS
  PF00053.19  19 qClCkenveGrkCd 32 
                  C+C +++ G +C 
  MMETSP1325-20131115|9202_1 266 GCDCDDGYFGYDCS 279
                 5************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.48s 00:00:01.14 Elapsed: 00:00:00.68
# Mc/sec: 1624.59
//
Query:       MMETSP1325-20131115|9206_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 704.24
//
Query:       MMETSP1325-20131115|9208_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|9209_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.1e-06   25.0   0.0    9.1e-06   25.0   0.0    1.2  1  PF14306.1 PUA-like domain


Domain annotation for each model (and alignments):
>> PF14306.1  PUA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   6.7e-10   9.1e-06      42      72 ..       2      32 ..       1      69 [. 0.87

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 6.7e-10
                HHHHHXXXXTTXXXXXXHHHHHHHHHHSBEX CS
   PF14306.1 42 lellaeGgfsPLegFmneedyesvleemrLa 72
                l++++eG++ PL+gFm+e   +++++++ L 
  MMETSP1325-20131115|9209_1  2 LQVIGEGWAAPLKGFMREGPLLQTIHFNSLL 32
                89*************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|9204_1  [L=350]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-41  140.1   0.3      8e-41  138.8   0.0    1.8  2  PF00861.17 Ribosomal L18p/L5e family
    3.8e-28   97.7   5.8    3.8e-28   97.7   4.0    2.1  2  PF14204.1  Ribosomal L18 C-terminal region
  ------ inclusion threshold ------
      0.024   14.0   6.9       0.26   10.6   3.2    2.3  2  PF03066.10 Nucleoplasmin
       0.03   14.4   1.6       0.03   14.4   1.1    2.7  2  PF09026.5  Centromere protein B dimerisation domain
       0.16   11.1   3.3       0.36   10.0   2.3    1.5  1  PF11561.3  Single strand annealing-weakened 1
        2.3    6.6   4.0        3.5    6.0   2.8    1.2  1  PF12794.2  Mechanosensitive ion channel inner membrane domain 1
        2.5    7.7   5.0        1.3    8.6   0.4    2.2  2  PF09618.5  CRISPR-associated protein (Cas_Csy4)


Domain annotation for each model (and alignments):
>> PF00861.17  Ribosomal L18p/L5e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.8   0.0   4.1e-44     8e-41       1     119 []      26     194 ..      26     194 .. 0.94
   2 ?   -3.0   0.1       3.7   7.3e+03      11      29 ..     286     304 ..     277     308 .. 0.63

  Alignments for each domain:
  == domain 1    score: 138.8 bits;  conditional E-value: 4.1e-44
                 --HCCCTCHHHCCCCCCCCTSSS-CEEEEEESSCEEEEEEE-SS---EEEECCCSCCCTT----TT--SHHHHHH---HCCCHHHH.....---..............................................-EEE----------HCHHHHHHHCC---B- CS
  PF00861.17   1 kktrrrarkrlvvqrknkgttekpRLvVrrsnkhiyaQiiddtkegdlvlasalskelkkyglkvgltntaaAklvGlllAkralk.....kgi..............................................avlvfdlggttyggrvfalakgareaGLki 119
                 +kt++rarkrl++q++nk++++k+RLvVr snkh+++Qii+++++gd v+a+a s+e+++yglkvgl+n+aa +++Gll+A+r+l+     + i                                              a l+++ ++t++g+r+f+++kga+++GL++
  MMETSP1325-20131115|9204_1  26 GKTDYRARKRLITQDRNKYNSPKYRLVVRLSNKHCICQIIYSEITGDKVMAHASSAEMPRYGLKVGLKNYAACYCTGLLVARRLLQkvgldE-IyegnltyededeedddfeytpevvtseynkrtyfveelnddknpfhALLDVGIQTTSTGARIFGALKGAVDGGLDV 194
                 599***********************************************************************************666550.155558999999999999999999***************************************************96 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 3.7
                 HCCCCCCCCTSSS-CEEEE CS
  PF00861.17  11 lvvqrknkgttekpRLvVr 29 
                   + +k++++++k R+ + 
  MMETSP1325-20131115|9204_1 286 FKRMQKLTYEERKARVAAK 304
                 5556677777777776654 PP

>> PF14204.1  Ribosomal L18 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   4.0     2e-31   3.8e-28       1      94 []     213     304 ..     213     304 .. 0.93
   2 ?   -4.4   1.0         7   1.4e+04      25      25 ..     317     317 ..     307     332 .. 0.57

  Alignments for each domain:
  == domain 1    score: 97.7 bits;  conditional E-value: 2e-31
   PF14204.1   1 aevhrkrIfgkhvaeYmkeLkeedeekYkkqFskYikkgieaddleelykkahaaIradPsrkkkekkekkkeskrlkkkkltleerkervkek 94 
                 a+vh++rIfg+hvaeYm+ L eed  kY +qF++Y++++ie dd+e+ly + h+aIradPs+++  kk+ +  ++  + +klt+eerk+rv++k
  MMETSP1325-20131115|9204_1 213 ADVHKERIFGEHVAEYMRYLIEEDAAKYATQFAEYVANEIEVDDIEDLYIDTHKAIRADPSPAE--KKDFTPDKNFKRMQKLTYEERKARVAAK 304
                 79**********************************************************8655..55676777888999***********986 PP

  == domain 2    score: -4.4 bits;  conditional E-value: 7
   PF14204.1  25 e 25 
                 e
  MMETSP1325-20131115|9204_1 317 E 317
                 1 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.019        36     123     139 ..     124     140 ..      69     150 .. 0.73
   2 ?   10.6   3.2   0.00013      0.26     122     143 ..     309     327 ..     220     337 .. 0.65

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.019
                 XXXXXXXXXXXXXXXXX CS
  PF03066.10 123 deeeeddeedddeeeee 139
                  +e+ed+e+dd e + e
  MMETSP1325-20131115|9204_1 124 TYEDEDEEDDDFEYTPE 140
                 45666666666555444 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00013
                 XXXXXXXXXXXXXXXXXXXXXX CS
  PF03066.10 122 edeeeeddeedddeeeeeeees 143
                 + e+ee+dee+d   eeee+++
  MMETSP1325-20131115|9204_1 309 QAEDEEEDEEED---EEEEDTK 327
                 222222222222...2222222 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   1.2      0.13   2.6e+02      23      32 ..     126     135 ..     115     154 .. 0.57
   2 ?   14.4   1.1   1.5e-05      0.03      21      57 ..     307     344 ..     291     349 .. 0.63

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.13
   PF09026.5  23 eeedeedede 32 
                 e+edeed+d 
  MMETSP1325-20131115|9204_1 126 EDEDEEDDDF 135
                 3333333332 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.5e-05
   PF09026.5  21 edeeedeededeedeeeddevp.vpsfgeamayfamvk 57 
                 e + edee+++eedeee+d  p + s+     y+a+v 
  MMETSP1325-20131115|9204_1 307 ELQAEDEEEDEEEDEEEEDTKPkIKSVPTQRPYLAIVD 344
                 34455555566666666665553667777777777776 PP

>> PF11561.3  Single strand annealing-weakened 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   2.3   0.00018      0.36     112     199 ..     239     331 ..     232     335 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00018
   PF11561.3 112 kvklhfilnlrldlfllnikkletlrkyllfkeq.......ikkiklseadnsLlvktkkllfekseeptillqEdeeegkqekdkeeeekkevk 199
                 k+  +f   ++ +++  +i++l    ++ +  +            k+ +  ++L  ++ k  +    +   l  Edeee+++e ++ee+ k+++k
  MMETSP1325-20131115|9204_1 239 KYATQFAEYVANEIEVDDIEDLYIDTHKAIRADPspaekkdFTPDKNFKRMQKLTYEERKARV--AAKRAELQAEDEEEDEEEDEEEEDTKPKIK 331
                 666777777777788888888776666655544465554444444555555666666666655..788888999******************996 PP

>> PF12794.2  Mechanosensitive ion channel inner membrane domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   2.8    0.0018       3.5     256     297 ..     290     330 ..     288     345 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0018
   PF12794.2 256 RrLayerakekraeilaqre.eeeeedssegaaeeieepeldl 297
                 ++L+ye  k++ a+++a+ + e+eeed++e   ee e+++ ++
  MMETSP1325-20131115|9204_1 290 QKLTYEERKARVAAKRAELQaEDEEEDEEE--DEEEEDTKPKI 330
                 678888888877777766665555544444..33334444444 PP

>> PF09618.5  CRISPR-associated protein (Cas_Csy4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.2      0.19   3.6e+02      99     138 ..      16      47 ..       4      89 .. 0.52
   2 ?    8.6   0.4   0.00066       1.3      94     149 ..     284     337 ..     266     347 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.19
                 E-----HHHHHHHHHHHHT--HHHHHHHS---------S- CS
   PF09618.5  99 kqaksskerllrrlvkraeeteeeakkripkskekrlklp 138
                  q+k         + +r+++t+  a+kr+ ++  ++ + p
  MMETSP1325-20131115|9204_1  16 YQVKF--------RRRREGKTDYRARKRLITQDRNKYNSP 47 
                 33333........222333333333333333333333333 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.00066
                 E--EEE-----HHHHHHHHHHHHT--HHHHHHHS---------S-EEEEE-ST--- CS
   PF09618.5  94 vvvkrkqaksskerllrrlvkraeeteeeakkripkskekrlklpfielkSsstgq 149
                 + +kr q  + +er++r ++krae+++e+ ++  ++ +e++ + p i  kS  t++
  MMETSP1325-20131115|9204_1 284 KNFKRMQKLTYEERKARVAAKRAELQAEDEEEDEEEDEEEEDTKPKI--KSVPTQR 337
                 5799999999***************9999999988888877788865..4555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1046  (0.0765067); expected 273.4 (0.02)
Passed bias filter:                      491  (0.0359128); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.78u 0.40s 00:00:01.18 Elapsed: 00:00:00.62
# Mc/sec: 1352.78
//
Query:       MMETSP1325-20131115|9210_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-43  148.6   0.0    1.5e-43  148.4   0.0    1.0  1  PF00117.23 Glutamine amidotransferase class-I
    1.7e-07   30.7   0.1    4.7e-05   22.8   0.1    2.6  1  PF07722.8  Peptidase C26
  ------ inclusion threshold ------
      0.027   13.8   0.0      0.035   13.4   0.0    1.2  1  PF01965.19 DJ-1/PfpI family
      0.065   11.9   0.0       0.11   11.1   0.0    1.3  1  PF10672.4  S-adenosylmethionine-dependent methyltransferase


Domain annotation for each model (and alignments):
>> PF00117.23  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.4   0.0   4.3e-47   1.5e-43       9     191 ..       2     176 ..       1     177 [. 0.95

  Alignments for each domain:
  == domain 1    score: 148.4 bits;  conditional E-value: 4.3e-47
                 SHHHHHHHHHHTT-EEEEEETTGGHHHHHHTTT--SEEEEE----TTTT-CCHHHHHHHHGT....TTS-EE------HHHHHH-TTEEETTC.CSEEEEEEEEEETTTSCCCTTTTSEEEEEE-ESEEECSGHHHHTTEEEEEEESSS-EEEEEEECSSSBEEESSBTTCTTS-GGGHHHHHHHHH CS
  PF00117.23   9 vtknleralrelgvkvevvpndadaeeileklsnpdgilisgGpgspgevegkieaikeare....nkiPiLGICLGmQllaiefggkvikekkeehmggnmrlghdgkaallyglpnevivrhrHsyevnekellpeglevtaksedggeimaivekknpivgvQFHPEssstpggpellfnfllk 191
                 +++n++r l+e g++v+vvp+d+++ ++   ls++dg+++s+Gpg+p++++ +ie +k+++     +  Pi+GICLG+Qlla++ g+k +k   ++++g+n+++ +       + +++++i+ ++H+y++++ ++lp+g++ +++++++g++++i++ ++p++  QFHPE++++p++++ lf+ +l+
  MMETSP1325-20131115|9210_1   2 IKNNIIRMLVEKGAEVTVVPWDYEFSKV---LSDYDGLFLSNGPGDPTRCTATIEQLKKVLAfegdQVRPIFGICLGNQLLALAAGAKAVKLP-FGNRGQNQPVTN-------TLTGECYITPQNHGYAIDD-DTLPAGWKTLFSNANDGSNEGIMHASKPFFTAQFHPEAQGGPTDTSHLFDMFLE 176
                 689*******************999999...69****************9999999999988878899************************9.***********8.......45667*************7.**************************************************9875 PP

>> PF07722.8  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.1   1.4e-08   4.7e-05     103     217 .]      63     159 ..       2     159 .. 0.81

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 1.4e-08
                 ------BB------HHHHHHH------EEE.............EEEEEEE--ET-STTTTS-HHHS--EEEEEEEE-BH..HHHH-EEEEEEE.----EEEEEEE--S-B----S-TT CS
   PF07722.8 103 lergvPvlgiCrGlqllnvalggtlyqdikeepglsdhreheqdasshavslekgsllarllgaeeievnslHhqaike..lakglevlAtae.dgvieaieseeakyfvlgvQWHPE 217
                  ++  P++giC+G qll +a g +   +++             + ++ + + + ++l  + +      + ++H +ai++  l  g++ l  ++ dg  e i ++++  +++  Q+HPE
  MMETSP1325-20131115|9210_1  63 GDQVRPIFGICLGNQLLALAAGAKAV-KLP-------------FGNRGQNQPVTNTLTGECYI-----TPQNHGYAIDDdtLPAGWKTLFSNAnDGSNEGIMHASK--PFFTAQFHPE 159
                 45677************999887654.556.............34455556667788777777.....899******99999999998755555********9994..68899****9 PP

>> PF01965.19  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0     1e-05     0.035      24      91 ..      20      86 ..       9     137 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1e-05
                ECTSEEGGG--GGGESEEEE----HHHHHHCT-.HHHHHHHHHHHH----EEEE----HHHHHHC-TT CS
  PF01965.19 24 vtadktledvnaddydalvlPGGhaaaedlradaeklvelvkefaaagkpiaaiChgpalLaaagllk 91
                v  d ++++v + dyd+l+l  G + + +  a  e l+++++    + +pi+ iC g +lLa a+  k
  MMETSP1325-20131115|9210_1 20 VPWDYEFSKVLS-DYDGLFLSNGPGDPTRCTATIEQLKKVLAFEGDQVRPIFGICLGNQLLALAAGAK 86
                555777888887.7*****************9999999999999999***********9999877666 PP

>> PF10672.4  S-adenosylmethionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.2e-05      0.11     246     274 ..     172     200 ..     164     206 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3.2e-05
   PF10672.4 246 dflieemaeeapelefverldnppefvdv 274
                 d+++e+ ++++pel+f  rl npp  + v
  MMETSP1325-20131115|9210_1 172 DMFLENCKKKSPELHFSPRLTNPPVKPKV 200
                 7899********************87666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.41s 00:00:00.92 Elapsed: 00:00:00.52
# Mc/sec: 1013.84
//
Query:       MMETSP1325-20131115|9213_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 177.51
//
Query:       MMETSP1325-20131115|9211_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 699.74
//
Query:       MMETSP1325-20131115|9215_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0096   15.9   0.0      0.032   14.2   0.0    1.8  1  PF00041.16 Fibronectin type III domain
  ------ inclusion threshold ------
       0.15   11.2   0.0       0.19   10.8   0.0    1.1  1  PF02250.10 35kD major secreted virus protein


Domain annotation for each model (and alignments):
>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   4.6e-06     0.032      49      81 ..      59      90 ..       6      95 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4.6e-06
                EEECCTTSEEEEES--TT-EEEEEEEEEC---- CS
  PF00041.16 49 ftvprtttsvtltgLkpgteYefrVqavngage 81
                   prt+ s  ++gL pg +Y+f+V  + + g+
  MMETSP1325-20131115|9215_1 59 LPQPRTA-STLIHGLIPGVTYHFTVSCIAEIGN 90
                3344445.*****************97777764 PP

>> PF02250.10  35kD major secreted virus protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   2.8e-05      0.19      79     120 ..       2      46 ..       1      60 [. 0.82

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.8e-05
  PF02250.10  79 Fgfiglptvk..siseyakGryvyvrlssraPw.rdtndlsinrt 120
                  gf++++ ++   +  y+kG+ + v  s++ P+ r++ d   nr 
  MMETSP1325-20131115|9215_1   2 MGFVKCGEIQryVVRTYVKGQELEVMHSAVGPGrRQRRDFCQNRV 46 
                 69*****99833589******************999999999984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 690.15
//
Query:       MMETSP1325-20131115|9216_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 470.23
//
Query:       MMETSP1325-20131115|9214_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   11.2   7.9       0.24   10.9   5.5    1.1  1  PF06295.7  Protein of unknown function (DUF1043)
        0.3   10.5  16.6       0.38   10.2  11.5    1.1  1  PF00769.14 Ezrin/radixin/moesin family
       0.41    7.7  19.8       0.49    7.5  13.7    1.0  1  PF12128.3  Protein of unknown function (DUF3584)
       0.48    9.4   4.5       0.53    9.2   3.1    1.0  1  PF12700.2  HlyD family secretion protein
        1.6    7.8   8.2        2.1    7.4   5.7    1.1  1  PF09475.5  Dot/Icm secretion system protein (dot_icm_IcmQ)
          4    7.6   9.2        4.9    7.3   6.4    1.1  1  PF13476.1  AAA domain
        8.3    4.3  41.9         11    3.8  29.1    1.2  1  PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
        8.6    6.1  18.9        5.9    6.6  12.1    1.4  1  PF04350.8  Pilus assembly protein, PilO
        9.1    5.8   7.1         11    5.5   4.9    1.1  1  PF02309.11 AUX/IAA family


Domain annotation for each model (and alignments):
>> PF06295.7  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   5.5   0.00016      0.24      23      85 ..      42     104 ..      33     118 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00016
   PF06295.7  23 klkkqkkikkeLeeakaeleeq.kkelkdhfaksaelletlakDYkkLYqhmaksskellpeld 85 
                 ++ + ++ + eL +a+a+ ++q +++  +h+ +   ll +l +  ++  qh+a+  ++ lp++ 
  MMETSP1325-20131115|9214_1  42 TVAQRQQHQLELLQAQAQAQQQqQQQQLQHLQQQQALLLRLQEQQQRQQQHYAQQIAN-LPQQA 104
                 55666667777777777766541445669*************************9999.55544 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2  11.5   0.00025      0.38      13      90 ..      26     103 ..      20     113 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00025
  PF00769.14  13 rleqleeemrkaqkeleeseekaeeleeklkqeeeeaqklekkakeleeekerLeeeaaksekekeeLekevdeaeae 90 
                 +l   ++ m++a+ +   ++++ ++le  + q+++++q+ +++ ++l+++++ L + ++++++++++ +++++++  +
  MMETSP1325-20131115|9214_1  26 SLGSEQSIMHQAESAQTVAQRQQHQLELLQAQAQAQQQQQQQQLQHLQQQQALLLRLQEQQQRQQQHYAQQIANLPQQ 103
                 6667788899999999999999**************************************************987655 PP

>> PF12128.3  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  13.7   0.00032      0.49     611     683 ..      32     104 ..      15     107 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00032
   PF12128.3 611 aleealqsaeakqkqaeeqlkqlnaeleeakravaeakqalkqarlelqrlkneqqslkdklekalaerkqqa 683
                  + ++ +sa+  ++++  ql+ l+a++++++++ +++ q+l+q++  l rl+++qq+++++  +++a+  qqa
  MMETSP1325-20131115|9214_1  32 SIMHQAESAQTVAQRQQHQLELLQAQAQAQQQQQQQQLQHLQQQQALLLRLQEQQQRQQQHYAQQIANLPQQA 104
                 4566778999999999************************************************999887776 PP

>> PF12700.2  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.1   0.00035      0.53      46     132 ..      41      98 ..      21     133 .. 0.56

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00035
   PF12700.2  46 qvlatldsseldeqlkealaaldqaeaelealsseeeeeiesklsqfsesrneslfedvyklkdeleallnkytnakkslnesglse 132
                 q                             a  ++++ e+ ++++q ++++++++++  ++ ++ l +l+++++ +++ +  ++  +
  MMETSP1325-20131115|9214_1  41 Q---------------------------TVAQRQQHQLELLQAQAQAQQQQQQQQLQHLQQQQALLLRLQEQQQRQQQHY--AQQIA 98 
                 2...........................3333333455566666666666666666666666666666666666666666..22222 PP

>> PF09475.5  Dot/Icm secretion system protein (dot_icm_IcmQ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.7    0.0014       2.1      30      91 ..      42     103 ..      31     107 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0014
   PF09475.5  30 eirdkfaekleskeeekakkeselanrvalrsgqqevfisLYsseGsnlqsWerilanLprq 91 
                  + ++ +++le  + +++ +++++ ++++  ++qq + + L +++ ++ q +++++anLp+q
  MMETSP1325-20131115|9214_1  42 TVAQRQQHQLELLQAQAQAQQQQQQQQLQHLQQQQALLLRLQEQQQRQQQHYAQQIANLPQQ 103
                 556667778888777777788888888888899***************************98 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.4    0.0032       4.9     135     192 ..      31      95 ..      11     105 .. 0.39

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0032
   PF13476.1 135 liaylgqer.........ekekfklkekkkrleelekeleeledekellekllqeeekekeleelee 192
                 + +++++e           +++ ++++ + ++++ +++l+ l++++ ll +l  +e+++++ + + +
  MMETSP1325-20131115|9214_1  31 QSIMHQAESaqtvaqrqqHQLELLQAQAQAQQQQQQQQLQHLQQQQALLLRL--QEQQQRQQQHYAQ 95 
                 3333444432222211111222222222222233333333333333332222..2222223333333 PP

>> PF09606.5  ARC105 or Med15 subunit of Mediator complex non-fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8  29.1    0.0075        11     203     325 ..      28     144 ..       6     154 .. 0.35

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.0075
   PF09606.5 203 qqaqqqqmqqqqqaggqqqqqplqqqqqlqkqqnqqqqqkqlqqqqgqaqaqaqmqqqqqaqggmqpqqmagaqaqvamqqqqtqqqaqqsq.lqvlinqlqqlqqpqgdrnavgqgapgqllg 325
                 + +q  + q++  + + q q     q ql+  q q q q+q qqqq+q  +q+q+      q+++q qq++ aq+     qq + +q+ +s  +   + +++q   ++g+   ++q  p+q ++
  MMETSP1325-20131115|9214_1  28 GSEQSIMHQAESAQTVAQRQ-----QHQLELLQAQAQAQQQQQQQQLQHLQQQQAL-LLRLQEQQQRQQQHYAQQIANLPQQASLPQPSSSSsSSPSPPPPSQAAPAAGVLPLAPQAPPAQ-IP 144
                 33333333333333222222.....2222222333222222333333333333332.2233333333333333332222222233333322202223344444444444444444444444.33 PP

>> PF04350.8  Pilus assembly protein, PilO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  12.1    0.0039       5.9       3      53 ..      57     107 ..      54     109 .. 0.95

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0039
   PF04350.8   3 kaeakeeelkkefeekkekaanLealkkqleeleeefeellkqLPskkeip 53 
                 +a+a++++ ++++++ +++ a L +l++q ++ ++++++++++LP+++ +p
  MMETSP1325-20131115|9214_1  57 QAQAQQQQQQQQLQHLQQQQALLLRLQEQQQRQQQHYAQQIANLPQQASLP 107
                 7899*******************************************9988 PP

>> PF02309.11  AUX/IAA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   4.9    0.0075        11       9      96 ..      20     107 ..      14     127 .. 0.68

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0075
                 XXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXX.XXX----------S- CS
  PF02309.11   9 rlglpgseesekaksesskakksskkrgfsetvdlkl.akeakedkeeeesksekeekkelskssekkkakppaakaqvvgwppvrsfr 96 
                 +lg+p s  se++  ++ ++ ++ ++r+  + ++l + +++a++++++++ ++ ++++  l + +e+++ ++ +  +q+ + p+  s  
  MMETSP1325-20131115|9214_1  20 SLGMPDSLGSEQSIMHQAESAQTVAQRQQHQ-LELLQaQAQAQQQQQQQQLQHLQQQQALLLRLQEQQQRQQQHYAQQIANLPQQASLP 107
                 6899999999888888888888888888666.444442555555555566666666666666666666666666677887777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3528  (0.258046); expected 273.4 (0.02)
Passed bias filter:                     1310  (0.0958163); expected 273.4 (0.02)
Passed Vit filter:                       271  (0.0198215); expected 13.7 (0.001)
Passed Fwd filter:                        28  (0.00204798); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.88u 0.51s 00:00:01.39 Elapsed: 00:00:00.56
# Mc/sec: 663.28
//
Query:       MMETSP1325-20131115|9217_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.06   12.7   2.3      0.062   12.7   1.6    1.1  1  PF05084.8 Granule antigen protein (GRA6)
       0.56    9.6   2.8        0.7    9.3   1.8    1.3  1  PF03010.9 GP4
          9    6.6   9.2        1.2    9.4   3.0    1.7  2  PF12374.3 Double-sex mab3 related transcription factor 1


Domain annotation for each model (and alignments):
>> PF05084.8  Granule antigen protein (GRA6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.6   1.4e-05     0.062      13      46 ..       9      42 ..       3      55 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.4e-05
   PF05084.8 13 afsPltvstlavvlvvfmGvllsslGavavaads 46
                a +P tv+t a ++ vf+ v  ss  + a+a  +
  MMETSP1325-20131115|9217_1  9 AAAPTTVTTTAATFCVFLVVASSSAATSAAATTA 42
                568***************9998888777777654 PP

>> PF03010.9  GP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.8   0.00015       0.7      64      89 ..      10      35 ..       2      46 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00015
   PF03010.9 64 lnpttltapaithclllvlaakmehp 89
                  ptt+t+ a t+c++lv+a+     
  MMETSP1325-20131115|9217_1 10 AAPTTVTTTAATFCVFLVVASSSAAT 35
                68*****************9876554 PP

>> PF12374.3  Double-sex mab3 related transcription factor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.3       0.2   9.3e+02      35      37 ..      11      13 ..       2      22 .. 0.42
   2 ?    9.4   3.0   0.00026       1.2      23      57 ..      20      53 ..      17      57 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.2
   PF12374.3 35 tqt 37
                ++t
  MMETSP1325-20131115|9217_1 11 APT 13
                222 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00026
   PF12374.3 23 ad.clfsvegrsptqtlssstsspaatgsrsllsds 57
                a  c+f+v ++s++ t  s+++++a+t   s++s s
  MMETSP1325-20131115|9217_1 20 ATfCVFLVVASSSAAT--SAAATTACTWRISASSAS 53
                5669999998887777..5889999**999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       753  (0.0550761); expected 273.4 (0.02)
Passed bias filter:                      455  (0.0332797); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.43s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 252.71
//
Query:       MMETSP1325-20131115|9207_1  [L=768]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-36  124.0  25.9    2.2e-09   37.1   0.8    7.2  7  PF00041.16 Fibronectin type III domain
    9.4e-08   31.7   2.0       0.18   11.5   0.0    3.8  3  PF14292.1  SusE outer membrane protein
     0.0064   15.9   0.4       0.33   10.3   0.0    3.1  3  PF11476.3  Toxoplasma gondii micronemal protein 1 TgMIC1


Domain annotation for each model (and alignments):
>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   1.2e-07   0.00054      49      84 ..      20      55 ..       9      56 .. 0.91
   2 !   13.6   0.0   1.1e-05     0.049       3      41 ..      73     114 ..      72     135 .. 0.85
   3 !    4.1   0.1    0.0097        44      62      82 ..     390     410 ..     381     413 .. 0.90
   4 !   34.8   0.2   2.6e-12   1.2e-08       2      83 ..     427     513 ..     426     515 .. 0.88
   5 !   37.1   0.8   4.8e-13   2.2e-09       2      83 ..     530     618 ..     529     620 .. 0.91
   6 ?   -0.3   0.0      0.24   1.1e+03       3      24 ..     637     659 ..     635     666 .. 0.77
   7 !   27.4   0.1   5.2e-10   2.4e-06      25      83 ..     689     747 ..     684     748 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.2e-07
                EEECCTTSEEEEES--TT-EEEEEEEEEC------B CS
  PF00041.16 49 ftvprtttsvtltgLkpgteYefrVqavngagegpe 84
                + v+++ +s++++gL+ gteY + V a+n+ g++p+
  MMETSP1325-20131115|9207_1 20 QFVSGDDRSFVIPGLTTGTEYYVHVSARNTYGTSPR 55
                67899999***********************99986 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 1.1e-05
                 BEEEEEECE..CSSEEEEEEE-BS.HHSSTBSEEEEEEEEE- CS
  PF00041.16   3 Penlsvsev..tstsltlsWsppk.dgggpitgYeveyrekg 41 
                 P +++vs +   ++sl++s  pp+ dgg++i +Y+ve+ +++
  MMETSP1325-20131115|9207_1  73 PNDVTVSVNsgVDDSLVVSYAPPDsDGGDEIIRYRVELDTDE 114
                 56677777766789**********************987664 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.0097
                 S--TT-EEEEEEEEEC----- CS
  PF00041.16  62 gLkpgteYefrVqavngageg 82 
                 gL  g+ Y  rV avn++g++
  MMETSP1325-20131115|9207_1 390 GLDMGQYYYARVVAVNTVGYS 410
                 89999*************865 PP

  == domain 4    score: 34.8 bits;  conditional E-value: 2.6e-12
                 -BEEEEEECECSSEEEEEEE-BS.HHSSTBSEEEEEEEEE-TTC....CEEEEEECCTTSEEEEES--TT-EEEEEEEEEC------ CS
  PF00041.16   2 aPenlsvsevtstsltlsWsppk.dgggpitgYeveyrekggge....ewkeftvprtttsvtltgLkpgteYefrVqavngagegp 83 
                 +P+ +++s +++ sl++ ++ p+ dgg++it Y +ey ++ +       ++++   ++    t+tgL+ gt Y +rV a n +g+g 
  MMETSP1325-20131115|9207_1 427 KPTSVTLSTMSAQSLRVVFDVPNsDGGDDITAYLIEYDTSADFAnalnTSVTYLDGGSPFYKTITGLTTGTYYYVRVSAMNSQGYGS 513
                 79***********************************7776666667666777777778799*********************9875 PP

  == domain 5    score: 37.1 bits;  conditional E-value: 4.8e-13
                 -BEEEEEECECSSEEEEEEE-BS.HHSSTBSEEEEEEEEE-TTC......CEEEEEECCTTSEEEEES--TT-EEEEEEEEEC------ CS
  PF00041.16   2 aPenlsvsevtstsltlsWsppk.dgggpitgYeveyrekggge......ewkeftvprtttsvtltgLkpgteYefrVqavngagegp 83 
                 aP+n+ +  ++++ lt+s+++p+ +gg+ i+ Y ve+ ++++ +      ++ ++tv+++++s+t+t L ++t Y  rV  +n ag+g 
  MMETSP1325-20131115|9207_1 530 APTNVALGVTSDSMLTVSFDEPTdNGGDAISAYYVEWDTSSSFNsgstspHKGSVTVDASENSYTITLLSENTVYYTRVSCINSAGYGT 618
                 8****888889999***********************7666666677999999999*****************************9886 PP

  == domain 6    score: -0.3 bits;  conditional E-value: 0.24
                 BEEEEEECE.CSSEEEEEEE-BS CS
  PF00041.16   3 Penlsvsev.tstsltlsWsppk 24 
                 P+ l+++    s ++ ++W+ p+
  MMETSP1325-20131115|9207_1 637 PHTLTATTGsDSGTIDITWQYPR 659
                 7778887776889999****996 PP

  == domain 7    score: 27.4 bits;  conditional E-value: 5.2e-10
                 HHSSTBSEEEEEEEEE-TTCCEEEEEECCTTSEEEEES--TT-EEEEEEEEEC------ CS
  PF00041.16  25 dgggpitgYeveyrekgggeewkeftvprtttsvtltgLkpgteYefrVqavngagegp 83 
                 +gg+++t Yevey e ++ +     + + t+ts+tl++L++g+ Y +rV a+n++g g 
  MMETSP1325-20131115|9207_1 689 TGGDDLTEYEVEYNEYSDFSGQDGGSSTTTSTSLTLEQLTAGRLYYIRVLARNTVGSGD 747
                 799**********88877774444444444559**********************9875 PP

>> PF14292.1  SusE outer membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   3.9e-05      0.18      34      85 ..      75     125 ..      64     136 .. 0.83
   2 !    8.8   0.1   0.00027       1.2      22      95 ..     416     491 ..     409     494 .. 0.79
   3 !    8.0   0.4   0.00046       2.1      28      95 ..     525     596 ..     512     604 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.9e-05
   PF14292.1  34 stslvldeaseeavtftWtaadyggtdasvtYtveldkkgndfskavslgtt 85 
                 ++++++++  ++++ +++ ++d  g+d  + Y veld+ +++f ++v ++++
  MMETSP1325-20131115|9207_1  75 DVTVSVNSGVDDSLVVSYAPPDSDGGDEIIRYRVELDT-DEEFPDPVAVEDI 125
                 5567777666789************************8.77*****998765 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00027
   PF14292.1  22 pesaeeltlpasstslvldeaseeavtftWtaadyggtdasvtYtveldkkgndfskavslg..ttdn.setsvsit 95 
                 +++++ + +p + ts++l  +s++++ + ++ ++  g+d  + Y +e d+   df++a++    + d+ s ++++it
  MMETSP1325-20131115|9207_1 416 ESAEKPMVTPGKPTSVTLSTMSAQSLRVVFDVPNSDGGDDITAYLIEYDTSA-DFANALNTSvtYLDGgSPFYKTIT 491
                 5667788899999*********9***************9999*******855.****97765113344555555555 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.00046
   PF14292.1  28 ltlpasstslvldeaseeavtftWtaadyggtdasvtYtveldkkgndfskavs...lgttdn..setsvsit 95 
                  + p   t++ l  +s++ +t+++++++++g+da   Y ve d+   +f++  +   +g+++   se+s +it
  MMETSP1325-20131115|9207_1 525 YEEPGAPTNVALGVTSDSMLTVSFDEPTDNGGDAISAYYVEWDTSS-SFNSGSTsphKGSVTVdaSENSYTIT 596
                 555666788888888999****************99*******966.66554330113332223466666666 PP

>> PF11476.3  Toxoplasma gondii micronemal protein 1 TgMIC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.037   1.7e+02      66     103 ..     426     463 ..     401     490 .. 0.83
   2 !   10.3   0.0   7.2e-05      0.33      62     108 ..     525     571 ..     506     586 .. 0.87
   3 ?   -1.6   0.0      0.34   1.5e+03      49     103 ..     619     673 ..     608     681 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.037
                 E-EEEEEE-------EEEEEEEEETTTB---EEEEETT CS
   PF11476.3  66 aGsavltiGlGskGrlavvldyarlnaalrsvayvved 103
                   ++ +t+   s   l vv+d  + +++   +ay +e 
  MMETSP1325-20131115|9207_1 426 GKPTSVTLSTMSAQSLRVVFDVPNSDGGDDITAYLIEY 463
                 5567788888889999******************9984 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 7.2e-05
                 ---EE-EEEEEE-------EEEEEEEEETTTB---EEEEETT----S CS
   PF11476.3  62 leeaaGsavltiGlGskGrlavvldyarlnaalrsvayvvedsGcks 108
                  ee+  ++++++G+ s+  l+v +d  + n++    ay ve    +s
  MMETSP1325-20131115|9207_1 525 YEEPGAPTNVALGVTSDSMLTVSFDEPTDNGGDAISAYYVEWDTSSS 571
                 589999**********************************9665555 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.34
                 EE-------EEE----EE-EEEEEE----.---EEEEEEEEETTTB---EEEEETT CS
   PF11476.3  49 fdttsksasdvveleeaaGsavltiGlGs.kGrlavvldyarlnaalrsvayvved 103
                  +t+s s+     l+ +  +  lt   Gs +G + +  +y r  a       +v+d
  MMETSP1325-20131115|9207_1 619 SQTSSPSS-AYPSLQVPGRPHTLTATTGSdSGTIDITWQYPRVPAHEIPCGGTVDD 673
                 45555443.34456667788889998886479999999999988877666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (768 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.06u 0.36s 00:00:01.42 Elapsed: 00:00:00.62
# Mc/sec: 2968.39
//
Query:       MMETSP1325-20131115|9218_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.6   0.0      0.037   13.4   0.0    1.1  1  PF11815.3 Domain of unknown function (DUF3336)


Domain annotation for each model (and alignments):
>> PF11815.3  Domain of unknown function (DUF3336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.7e-06     0.037      14      89 ..       9      85 ..       6      97 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.7e-06
   PF11815.3 14 eklrkelraaesyeeWkaaAkelDelegndaWkeedesayYDyklvkerlkqlrearekkdi.eellallrtclkrn 89
                e+lr   ++  sy+   a A++ D+++  da k++   a+YD  +v ++ k   +a  +k i e++++ l++++   
  MMETSP1325-20131115|9218_1  9 EELRAITNEKASYKYMSAHASQFDDHFVFDATKKRMGRADYDRFTVGKVRKDGGKAGSSKAIpESVMSNLKEKWADV 85
                688999999*************************************9998877777777766566666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 488.86
//
Query:       MMETSP1325-20131115|9220_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 226.07
//
Query:       MMETSP1325-20131115|9219_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00084   18.5   0.1     0.0026   17.0   0.1    1.9  1  PF02809.15 Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   1.9e-07    0.0026       2      17 ..      48      63 ..      47      64 .. 0.93

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.9e-07
                CCHHHHHHHHHHHHHH CS
  PF02809.15  2 sEEedLqlALalSlee 17
                +E+e+++ A+alSl+e
  MMETSP1325-20131115|9219_1 48 TEDEQIRVAIALSLSE 63
                8*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 723.90
//
Query:       MMETSP1325-20131115|9224_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.22   11.1   2.0       0.51    9.9   1.4    1.5  1  PF14446.1 Prokaryotic RING finger family 1


Domain annotation for each model (and alignments):
>> PF14446.1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4   3.7e-05      0.51       5      25 ..      31      49 ..      28      51 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 3.7e-05
   PF14446.1  5 ktrCavCgkklkdkddivvCp 25
                +  C+vC++k+  k + v+C+
  MMETSP1325-20131115|9224_1 31 NRPCPVCNDKM--KGLCVACK 49
                678********..89999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 705.08
//
Query:       MMETSP1325-20131115|9225_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   14.4   1.4      0.038   14.3   1.0    1.0  1  PF05177.7 RCSD region


Domain annotation for each model (and alignments):
>> PF05177.7  RCSD region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.0   2.8e-06     0.038      62      99 ..      11      48 ..       2      49 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.8e-06
   PF05177.7 62 satEevksPtkkekspekvEekpasptkkesvtkkeks 99
                ++t +++sP ++++s+++ Ee++ ++  ++++tkk k+
  MMETSP1325-20131115|9225_1 11 AVTSQLNSPEEDKNSGKRREEEKRAELFGNQATKKGKG 48
                467799************************99999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|9221_1  [L=594]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-22   80.3   0.0      4e-21   75.3   0.0    2.1  1  PF04095.11 Nicotinate phosphoribosyltransferase (NAPRTase) family
     0.0074   15.9   0.0      0.018   14.7   0.0    1.6  1  PF02749.11 Quinolinate phosphoribosyl transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF04095.11  Nicotinate phosphoribosyltransferase (NAPRTase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.3   0.0   5.9e-25     4e-21       3     228 ..     224     466 ..     222     478 .. 0.82

  Alignments for each domain:
  == domain 1    score: 75.3 bits;  conditional E-value: 5.9e-25
                 B-----TT-S-HHHHHHHH---CCCHTTTB----BHHHHHHTT--------HHHHHHTCCHHT...-GCCHHH......HHHHHHHHHH-T----BS-SS-HHHHHCC--.............................H----EE----HHH.......HHHHHHHHHHCTS---CC....CSEEEE-SS--HHHHHHHHHHHHH---EEEB----TTTS-EE-.SSSTTSEE----EEEEEEEE---B--B--S-----B. CS
  PF04095.11   3 lhDFGtRrrsslesaeivvsalkkahlvnflGTsnvaaaakysipaagtsaheavgkeqeldafrnkleqfqk.lsvvsdsldlwnaleknlgiaLkdlvetdaflkdfr.............................aflgvRpDSGdpve.......vleklakhfgstlnsdgykvlnkkrvifsDgldvekieeilealkekgfniaFGiGtnltqdlnrdtlkfavklsalniviklvevnkdpvtklsdsskkgrl 228
                 l +FG Rr+   +  + ++sa+++a  + f+GTsnv+a + ++i ++gt+ah++v++      +++ + +  + l+ v +  ++  a  + + ++L  +v+ +    d                               +  g+R DSGd+++        ++ +a+   +  + + +    k ++++s+++ +e + +++++ +      aFGiGt+l+++ ++          al +v klve+n++p++kls +++k+++
  MMETSP1325-20131115|9221_1 224 LLEFGLRRA---QGPDGGISASRYAVAGGFDGTSNVLAGKLTGIMVSGTHAHAFVQSYTGFHMIQDPMLDNVDfLAQVQELRKTKPAWMETNSSELAAFVAYALCFPDNFlalvdtydtlnsgvfnyvmvaiclirlgyTPKGIRLDSGDLAYlskecrrRIDDAADEHADC-GDELR----KSIIVASNDIHEEVLLSLNNQGHC---IDAFGIGTHLVTCKAQ---------PALGCVYKLVEINGSPRIKLSQEIGKVVI 466
                 689******...*********************************************9999999998888888766666555555555555555555555544322221124455999999999*************88889***********7777666666666666666.66666....99******************9999...99************99.........9*************************983 PP

>> PF02749.11  Quinolinate phosphoribosyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   2.6e-06     0.018      41      86 ..     147     197 ..     140     199 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.6e-06
                 HHT......TTTEE.E------EE----EEEE-EEEHHHHGGGHHHHHHHHHH CS
  PF02749.11  41 eql......gleve.wlvkdGerveagevlltieGnaralltaERvaLnllqr 86 
                 ++l      +  ++   v+dG+ v + +vll++eG++++    E ++Lnl+ +
  MMETSP1325-20131115|9221_1 147 DYLanmdcsQ--ITvSAVRDGTIVFPRTVLLKVEGPLAVGQLLETTLLNLVNY 197
                 5555443323..334567********************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.92u 0.37s 00:00:01.29 Elapsed: 00:00:00.57
# Mc/sec: 2454.20
//
Query:       MMETSP1325-20131115|9226_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 868.01
//
Query:       MMETSP1325-20131115|9227_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.029   14.0   0.1      0.048   13.3   0.1    1.4  1  PF11094.3 Membrane-associated tegument protein


Domain annotation for each model (and alignments):
>> PF11094.3  Membrane-associated tegument protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   3.5e-06     0.048      22      36 ..      49      63 ..      47      66 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.5e-06
   PF11094.3 22 sGevvsLdadaFedf 36
                sGe+v+L+++ Fe+ 
  MMETSP1325-20131115|9227_1 49 SGETVELTDERFEEM 63
                8************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 587.34
//
Query:       MMETSP1325-20131115|9228_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0059   16.4  13.6     0.0067   16.2   9.4    1.0  1  PF11559.3  Afadin- and alpha -actinin-Binding
  ------ inclusion threshold ------
      0.054   12.9   6.2      0.064   12.7   4.3    1.0  1  PF04546.8  Sigma-70, non-essential region
       0.19   11.3   4.3       0.75    9.4   0.1    2.4  2  PF02183.13 Homeobox associated leucine zipper
       0.38    9.5   8.3       0.39    9.5   5.7    1.0  1  PF10037.4  Mitochondrial 28S ribosomal protein S27
       0.44    8.8   9.1       0.48    8.7   6.3    1.0  1  PF05667.6  Protein of unknown function (DUF812)
       0.55    9.6   2.8       0.63    9.4   1.9    1.0  1  PF14253.1  Bacteriophage abortive infection AbiH
       0.56    9.9  12.8       0.62    9.8   8.9    1.0  1  PF09311.6  Rabaptin-like protein
       0.57   10.2   9.1        1.2    9.2   6.0    1.9  1  PF13747.1  Domain of unknown function (DUF4164)
        0.6    9.8   8.0       0.32   10.7   2.9    1.8  2  PF07200.8  Modifier of rudimentary (Mod(r)) protein
       0.79   10.0   3.5       0.99    9.7   2.5    1.3  1  PF13334.1  Domain of unknown function (DUF4094)
       0.88    8.7   6.0          1    8.5   4.2    1.2  1  PF03432.9  Relaxase/Mobilisation nuclease domain
          1    9.1  11.0        1.2    8.9   7.6    1.1  1  PF03938.9  Outer membrane protein (OmpH-like)
        1.1    8.9   9.2       0.95    9.1   5.5    1.5  2  PF14235.1  Domain of unknown function (DUF4337)
        1.9    7.9   8.5        2.1    7.7   5.9    1.1  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
        2.6    6.2   7.5        2.6    6.2   5.2    1.0  1  PF03961.8  Protein of unknown function (DUF342)
        3.8    7.7   5.5        4.3    7.5   3.8    1.1  1  PF04880.8  NUDE protein, C-terminal conserved region
          4    7.7   6.1        8.2    6.7   4.2    1.6  1  PF06156.8  Protein of unknown function (DUF972)
        9.2    5.7  12.8         10    5.5   8.8    1.0  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   9.4   8.8e-06    0.0067      55     138 ..       2      85 ..       1      88 [. 0.97

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 8.8e-06
   PF11559.3  55 esleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkniiqsiktqyahelkkk 138
                 ++l+ ++ kl+ e    + ++e   t+ ++ + el+   e+ r+l ++ ++l q+ + + e ++r   +iq+ +tqya e +k+
  MMETSP1325-20131115|9228_1   2 KELNLQIEKLTKEVIESKARLENEATETQARQIELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRKH 85 
                 68999*****************************************************************************97 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   4.3   8.4e-05     0.064      85     164 ..       9      85 ..       2      88 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 8.4e-05
   PF04546.8  85 aelrkqyeklekalekegrkskkaekareelaeefksfrlvpkqfdrLvdnlramvdrvraqERqimklcverakmpRkd 164
                 ++l+k   + ++ le+e     ++++ + el +  ++fr       +Lv++ +++++  r+ +  i++l++++a+  Rk+
  MMETSP1325-20131115|9228_1   9 EKLTKEVIESKARLENEA---TETQARQIELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRKH 85 
                 333333333334444444...4455556666666666666667789**************************99988775 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.7      0.11        87      26      43 ..       6      23 ..       2      25 .. 0.77
   2 ?    9.4   0.1   0.00099      0.75      18      37 ..      40      59 ..      35      66 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.11
  PF02183.13 26 kEkekLraevlsLkeklq 43
                 + ekL +ev + k++l+
  MMETSP1325-20131115|9228_1  6 LQIEKLTKEVIESKARLE 23
                566899999999999886 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00099
  PF02183.13 18 kaendsLqkEkekLraevls 37
                ++e+++L+++ +kL  + + 
  MMETSP1325-20131115|9228_1 40 AEEFRALHADRQKLVQQWQD 59
                79************999775 PP

>> PF10037.4  Mitochondrial 28S ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.7   0.00052      0.39     306     387 ..       6      87 ..       1      89 [] 0.76

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00052
   PF10037.4 306 eaidkvess..elleellleeveksklkeee.llaeyaesfqelseklqalekvelesllsvkerleaiekedleleeerqkewf 387
                  +i+k++++  e+    l++e+ + +   ++  l + ae f++l+  +q+l++   + ++++++r  +i++ + +  eer k ++
  MMETSP1325-20131115|9228_1   6 LQIEKLTKEviESKAR-LENEATETQ--ARQiELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRKHSE 87 
                 5667777764322222.233333333..56668***********************************************99876 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   6.3   0.00064      0.48     394     465 ..       6      80 ..       1      87 [. 0.83

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00064
   PF05667.6 394 envakLqalveasserlleLaqqWeahrkpLidelrelkekarekedetkrkleeikklrek...ikeleselqt 465
                  +++kL + v +s++rl++ a + +a +  L  + +e+++  +++++  +++ + i+ +r++   i+el+ + ++
  MMETSP1325-20131115|9228_1   6 LQIEKLTKEVIESKARLENEATETQARQIELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRdgtIQELATQYAE 80 
                 5789********************************************************862224444444444 PP

>> PF14253.1  Bacteriophage abortive infection AbiH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.9   0.00082      0.63      57     120 ..       5      68 ..       2      87 .. 0.68

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00082
   PF14253.1  57 Eealgkldeklseeek.fsdeyediiddlrkeleteeesieyleidlkklfkeliksieiieeki 120
                   +++kl+++++e+++ +++e    +++ + el+   e++  l+ d +kl+++++++ie+++ ++
  MMETSP1325-20131115|9228_1   5 NLQIEKLTKEVIESKArLENEA-TETQARQIELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRD 68 
                 5688999999887555233333.3333334478888899******************99998654 PP

>> PF09311.6  Rabaptin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   8.9   0.00081      0.62      67     157 ..       2      85 ..       1      89 [] 0.88

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00081
   PF09311.6  67 keLqflvlkkreeliesrtakeheeeelkseidlLkelkeelEeelqaeiteleqiqsekdqlqaslyeiparlrtlhnlviqlesqgree 157
                 keL ++ +k ++e ies++  e e++e+++++ +L+      Ee  +  +      q   +q q++++  ++r  t+++l +q+++++r+ 
  MMETSP1325-20131115|9228_1   2 KELNLQIEKLTKEVIESKARLENEATETQARQIELDR---TAEEFRALHA----DRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRKH 85 
                 89*******************************9999...4444444444....5589999***************************986 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   6.0    0.0016       1.2      10      70 ..      12      72 ..       1      80 [. 0.72

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0016
   PF13747.1 10 lkrLeaaldsLesaverrleaerkrdeleaeiqaldadrsrLaqeLdkaearaerleeanr 70
                +k+  ++  +Le+  ++ + ++ + d +++e++al+adr++L q+  ++    +r + + +
  MMETSP1325-20131115|9228_1 12 TKEVIESKARLENEATETQARQIELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRDGTIQ 72
                4444444467788888888888888*****************9998877666666555555 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.9   0.00042      0.32      38      94 ..       3      59 ..       1      61 [. 0.92
   2 ?    3.2   0.1     0.086        65      62      94 ..      55      87 ..      52      89 .] 0.86

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00042
                HHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---- CS
   PF07200.8 38 ellaqnesLaeenlekepqleelkaqlqdkleelkkleekyeekkqkldelsskysp 94
                el  q+e+L +e +e + +le++ +++q++  el    e+++++  ++++l +++++
  MMETSP1325-20131115|9228_1  3 ELNLQIEKLTKEVIESKARLENEATETQARQIELDRTAEEFRALHADRQKLVQQWQD 59
                566799********************************************9998875 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.086
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---- CS
   PF07200.8 62 aqlqdkleelkkleekyeekkqkldelsskysp 94
                +q qd +e ++    +++e+ +++ e+++k s+
  MMETSP1325-20131115|9228_1 55 QQWQDTIEAMRRRDGTIQELATQYAEERRKHSE 87
                678899999999999999999999999988886 PP

>> PF13334.1  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.5    0.0013      0.99      34      94 ..      26      83 ..       5      84 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0013
   PF13334.1 34 lissqeaeeelqlvsedcdkkkkkesdqkdilgeVsktheaiqsLdktIssLemeLAaars 94
                 +++q ++ el    e++   +  ++d ++ +++ ++t ea    d tI +L ++ A++r 
  MMETSP1325-20131115|9228_1 26 ATETQARQIELDRTAEEF---RALHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERR 83
                223334444444444444...255799999****************************996 PP

>> PF03432.9  Relaxase/Mobilisation nuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   4.2    0.0013         1     148     217 ..      19      87 ..       1      89 [] 0.78

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0013
   PF03432.9 148 k.sprnrqseaekekaeknkssykeeirqalkkalenasdfedlkealkekglelrrktgkkltykltden 217
                 k   +n  +e++++ +e   + ++ee r   ++ ++ +++++d++ea+++++  +++  ++++ ++++ ++
  MMETSP1325-20131115|9228_1  19 KaRLENEATETQARQIE--LDRTAEEFRALHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRKHSE 87 
                 22334556788888888..88999*******************************9999999988887765 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   7.6    0.0016       1.2      58     129 ..       7      82 ..       1      85 [. 0.71

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0016
   PF03938.9  58 elqkeqknlqseraqlsae..aekakeeelqakeqelqayaqqlqaelqaeqqe..vlqklidkiadaikkvakek 129
                 +++k+ k++ +++a+l +e  + +a++ el++ ++e++a   + q+ +q+ q+   ++++    i++ ++++a+e+
  MMETSP1325-20131115|9228_1   7 QIEKLTKEVIESKARLENEatETQARQIELDRTAEEFRALHADRQKLVQQWQDTieAMRRRDGTIQELATQYAEER 82 
                 3455555555556655555005566666888999999999999999999999987788888888999999999997 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.8     0.038        29      82     111 ..      12      41 ..       2      49 .. 0.38
   2 ?    9.1   5.5    0.0013      0.95      52     109 ..      25      88 ..      18      89 .] 0.88

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.038
   PF14235.1  82 kkrikseakeleakakeaeeesdealhkhh 111
                 +k++ + ++ le++a+e ++++ e+ +  +
  MMETSP1325-20131115|9228_1  12 TKEVIESKARLENEATETQARQIELDRTAE 41 
                 222222233333333333333333322222 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0013
   PF14235.1  52 tlaelaaelleleaks......aaelkkkiekykkekkrikseakeleakakeaeeesdealhk 109
                 + +e++a+++el++++      +a+ +k +++++++ + ++++  ++++ a+++ ee+ ++ +k
  MMETSP1325-20131115|9228_1  25 EATETQARQIELDRTAeefralHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRKHSEK 88 
                 5678888899988877999999******************************999999887765 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.9    0.0027       2.1      75     158 ..       2      87 ..       1      89 [] 0.82

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0027
   PF07106.8  75 nkldaeieelreevqelkqeise..lekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtkeeiekvkkeykklk 158
                 ++l+ +ie+l++ev e k   ++   e++ ++++ + t ee +   + ++k v++ ++ +e++++    +++ +++ +++ +k+ +
  MMETSP1325-20131115|9228_1   2 KELNLQIEKLTKEVIESKARLENeaTETQARQIELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRKHSE 87 
                 68999*********9998877651156667788888899************************99988888888888877777765 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.2    0.0034       2.6     323     400 ..       6      80 ..       1      89 [] 0.66

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0034
   PF03961.8 323 iev.gldepelkeklkeleeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelke 400
                 +++  l  +e++e+ ++le+e  e+++++ +l+++ +++++l+a+ q   +  +q + ++e++ +    ++el ++++e
  MMETSP1325-20131115|9228_1   6 LQIeKLT-KEVIESKARLENEATETQARQIELDRTAEEFRALHADRQ---KLVQQWQDTIEAMRRRDGTIQELATQYAE 80 
                 4554555.788888899999999999999999999888888777443...55666666666666666666666555553 PP

>> PF04880.8  NUDE protein, C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.8    0.0057       4.3       5      64 ..       8      70 ..       6      86 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0057
   PF04880.8  5 fEkklnqAlErnalLelEldEkesLrvevqRLkDEarDLkqEl..ivrerlrevn.rksrpap 64
                +Ek     +E +a Le E  E +  ++e+ R  +E r L+ +    v++ +   +  ++r  +
  MMETSP1325-20131115|9228_1  8 IEKLTKEVIESKARLENEATETQARQIELDRTAEEFRALHADRqkLVQQWQDTIEaMRRRDGT 70
                57778889*******************************765444577766654314445444 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   4.2     0.011       8.2      12      65 ..       3      61 ..       1      88 [. 0.65

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.011
   PF06156.8 12 eleeqleelleeleelkkelkelleenaelkleneklrerleelee.....eekkkekk 65
                el+ q+e+l++e+ e k++l++   e ++ ++e ++  e+++ l++      ++ +++ 
  MMETSP1325-20131115|9228_1  3 ELNLQIEKLTKEVIESKARLENEATETQARQIELDRTAEEFRALHAdrqklVQQWQDTI 61
                67888888888888888888888888888888888888887777663333322222233 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.8     0.014        10      91     173 ..       2      84 ..       1      88 [. 0.85

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.014
   PF04156.9  91 seleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrselerlqed 173
                 +el  ++e+l +++ e++++le++  + +  q el + +e++ +l  + ++l +++++++e+ ++ + ++qel ++++++++ 
  MMETSP1325-20131115|9228_1   2 KELNLQIEKLTKEVIESKARLENEATETQARQIELDRTAEEFRALHADRQKLVQQWQDTIEAMRRRDGTIQELATQYAEERRK 84 
                 57788999999999999999999999999999999999999999999999999999999989999999999999988888654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1371  (0.100278); expected 273.4 (0.02)
Passed bias filter:                      765  (0.0559538); expected 273.4 (0.02)
Passed Vit filter:                       119  (0.00870392); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.44u 0.47s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|9223_1  [L=1051]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.2e-197  655.8   0.0     1e-148  495.7   0.0    2.1  2  PF02538.9  Hydantoinase B/oxoprolinase
    8.1e-97  323.6   1.0    1.4e-96  322.9   0.2    1.7  2  PF01968.13 Hydantoinase/oxoprolinase


Domain annotation for each model (and alignments):
>> PF02538.9  Hydantoinase B/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.0   0.0   3.3e-50   2.2e-46       1     110 [.     512     621 ..     512     626 .. 0.98
   2 !  495.7   0.0  1.5e-152    1e-148     112     517 ..     647    1047 ..     642    1051 .] 0.99

  Alignments for each domain:
  == domain 1    score: 158.0 bits;  conditional E-value: 3.3e-50
   PF02538.9   1 adpilleifkklfssiaeemgialrktaaSpnikerldfscalfdaeGdlvanathipvHlgsmgsavkelvknredeledgDvlivNdpyiggtHlpDitvltPiFsse 110
                 +dpi+le+f++l++ iae+mg++l+++++S+nikerldfscalfd+eG+l+ana+h+pvHlgsm++avk ++ +  + + +gDv++ N py+ggtH+pD+tv+tP+Fs++
  MMETSP1325-20131115|9223_1 512 VDPITLEVFNNLYMAIAEQMGVTLQNVSYSVNIKERLDFSCALFDPEGNLIANAPHVPVHLGSMSEAVKSVLGAHGGAMCPGDVYMLNAPYNGGTHIPDVTVITPVFSED 621
                 59*********************************************************************************************************987 PP

  == domain 2    score: 495.7 bits;  conditional E-value: 1.5e-152
   PF02538.9  112 lifyvasraHhadvGgitPGSmstnskelfeeGllitskllvkegelkeellekllvenvyisRipeenlaDlkaqiaanekGidsleklidevgeeevlelikkikdnaeeavkkkiakldeiygakdievedkldkgklikveitinvkkeklkldFdgtsrqldhnlNavkavvtsavlyvlralvaddiplNdGclrplkiiikkgsllnprkpaavvagnvetSqrisdvlykalyveaassGtmNnvtfgqggkedgeafqyyETiggGsGagdglngadavhtnmtntrltdiEvlEsryPvlllefsvrkgsGGaGkyrGGnGivRevkflkdvtvsilserrrvspyGlagGkpgasGenflakktgkevelkgkaslylepgDrlliktpGGgGyg 517 
                   +f+vasr+Hh ++GgitPGSm++ s+++ eeG+li++ ++v +g++ e+++ +l++ + +++R+ ++nl+Dl+aqiaane Gi+ l+k++ e+g + v++++ +++dnaeeav+++i++l  +  +++++  d++d +  +kv++ +++++++++ldF+gt +q  +n+Na+ a+ ++avlyv+r+lv+++iplN+Gcl+plk+i+++gs++np++paavvagnve+Sq i+ +ly+al+  a s+GtmNn+tfg++      + +yyETi+gG+Gag   +g+davh++mtntrltd+E+lE r+P+++  f +r+gsGG+G yrGG+Gi+R+++fl+++tvsil+++r+v p+Gl+gG++ga G n+++  +g+ ++l  + s++++ g++++i+tpGGgG+g
  MMETSP1325-20131115|9223_1  647 PLFFVASRGHHSEIGGITPGSMPPFSRHIDEEGILIDNVQMVDRGRFLEKEVAELFLGHKHPTRNLDQNLSDLRAQIAANEAGIKDLHKMVREFGLDVVQTYMGHVQDNAEEAVRRVIDQLPDEPSEFTYQMDDDEDGTPYVKVRVEVDRADRSVTLDFTGTAPQQPTNFNAPVAIAQAAVLYVFRTLVDEKIPLNAGCLKPLKMILPEGSMVNPKHPAAVVAGNVEVSQTITCALYGALGKLAGSQGTMNNFTFGNEA-----GLNYYETICGGTGAGPDHDGCDAVHSHMTNTRLTDPEILEFRFPLMVDSFDIRRGSGGNGEYRGGDGIIRKIRFLEPMTVSILTNHRKVPPFGLMGGEEGALGANYVVGVDGSVKNLGHRGSVDIKAGETFVIETPGGGGFG 1047
                  59*************************************************************************************************************************99*****999****************************************************************************************************************************99.....9********************************************************************************************************************************************9 PP

>> PF01968.13  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.9   0.2    2e-100   1.4e-96       1     288 [.      18     313 ..      18     315 .. 0.97
   2 ?   -2.4   0.0      0.26   1.8e+03     188     242 ..     720     774 ..     699     794 .. 0.64

  Alignments for each domain:
  == domain 1    score: 322.9 bits;  conditional E-value: 2e-100
  PF01968.13   1 RavTavlnAyLspilrrylesvedsleergikaplmvmqsdGglvsieearekpvetilSGPaagvvgaaa..elaglknaivvDvGGTstDvalisdgepelseegevvggvrtrvpaldirtvaaGGgsivlkdeggklrvgpgsagvdpgpacyrkGgep....ltvtDanlvlgklqpedflk..gpdgdqkldselarrafeelakelslk........veevaegllsvagetmadairvlsvqrgkdk.kelplvlfGGagplhaaelaeelgakevipeeyagvlsAvGalladvrk 288
                 R+ Ta+++AyLspilrry+++v ++l       +l++mqs+Ggl ++  +++k  ++ilSGPa+g+vgaa   e +gl++++++D+GGTstDv +++ ge+e++ e+ev +gvr+r+p+++i+tvaaGGgsi+ ++++g+l+vgp+sag++pgpacyr+Gg      l+v+D+n++lgklqp+ f+   gp++d++ld+ ++++ f+++++e++++        v eva g+l++a++ ma ai++++ +rg d  k+++l++fGGag +ha+ +a++lg+++v+ ++yagvlsA+G++ladvr 
  MMETSP1325-20131115|9223_1  18 RGDTATVDAYLSPILRRYVDQVASELGG----TRLLFMQSSGGLKDATFFQGK--DSILSGPAGGIVGAARtcEVEGLDHVVGFDMGGTSTDVCHYK-GEYERAFETEV-AGVRIRAPMMNIHTVAAGGGSIL-SFSNGRLQVGPESAGANPGPACYRRGGPDsgcgLAVSDINVMLGKLQPDLFPPvfGPNADEPLDKTVVEERFAKVTAEINASfpdlppksVYEVATGFLTIAVDHMAIAIKEITTRRGIDVaKKYALCSFGGAGGQHACLVADALGMETVFMHPYAGVLSAFGMGLADVRT 313
                 89***********************976....89*******************..******************************************.**********9.***********************.9999**********************95355559************************************************************************************985389*********************************************97 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 0.26
  PF01968.13 188 kldselarrafeelakelslkveevaegllsvagetmadairvlsvqrgkdkkel 242
                 + +  + ++ +++l k + +   +v ++++ +++++  +a+r++++q   +++e+
  MMETSP1325-20131115|9223_1 720 RAQIAANEAGIKDLHKMVREFGLDVVQTYMGHVQDNAEEAVRRVIDQLPDEPSEF 774
                 3334444444566666666666677777777777777777777766666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1051 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      376  (0.0275015); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.52u 0.33s 00:00:01.85 Elapsed: 00:00:00.66
# Mc/sec: 3816.02
//
Query:       MMETSP1325-20131115|9229_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        64  (0.0046811); expected 273.4 (0.02)
Passed bias filter:                       58  (0.00424225); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|9231_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        54  (0.00394968); expected 273.4 (0.02)
Passed bias filter:                       51  (0.00373025); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 235.11
//
Query:       MMETSP1325-20131115|9232_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-09   37.9   0.0    1.7e-09   37.7   0.0    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
    2.3e-09   36.4   0.0    0.00035   20.1   0.1    2.3  2  PF00023.25 Ankyrin repeat
    1.8e-07   31.0   0.2    3.8e-07   30.0   0.1    1.7  1  PF13857.1  Ankyrin repeats (many copies)
    2.2e-07   31.0   0.0    5.8e-07   29.7   0.0    1.7  2  PF13637.1  Ankyrin repeats (many copies)
    7.2e-06   25.6   0.0        0.2   11.8   0.0    2.5  2  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.0   6.3e-13   1.7e-09      40      86 ..       2      48 ..       1      86 [. 0.62

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 6.3e-13
   PF12796.2 40 eivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86
                ++v++ +e+ga+vn++d  g+tpL +A+ +g+  +v +Ll++ga v 
  MMETSP1325-20131115|9232_1  2 KMVEWFIEHGANVNHTDRGGHTPLEFAAAAGNMIVVTILLNAGATVT 48
                45666666666666666666666666666666666666666666553 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   8.6e-06     0.024      16      32 ..       2      18 ..       1      19 [. 0.91
   2 !   20.1   0.1   1.3e-07   0.00035       2      28 ..      21      47 ..      20      49 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 8.6e-06
                HHHHHHHHTTSSTTHBH CS
  PF00023.25 16 evvklLlsqGAdlnaqd 32
                ++v++++++GA++n++d
  MMETSP1325-20131115|9232_1  2 KMVEWFIEHGANVNHTD 18
                69************998 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 1.3e-07
                SCBHHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdl 28
                G TPL  Aa  gn+ vv+ Ll++GA +
  MMETSP1325-20131115|9232_1 21 GHTPLEFAAAAGNMIVVTILLNAGATV 47
                99***********************76 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   1.4e-10   3.8e-07       2      41 ..       8      46 ..       7      65 .. 0.84

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 1.4e-10
   PF13857.1  2 lehgpadvnatdeggntpLhlAakggalevvrlLlapgad 41
                +ehg a+vn+td+gg tpL +Aa +g+  vv +Ll++ga 
  MMETSP1325-20131115|9232_1  8 IEHG-ANVNHTDRGGHTPLEFAAAAGNMIVVTILLNAGAT 46
                6999.******************************55553 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   2.1e-10   5.8e-07      15      54 .]       2      41 ..       1      41 [. 0.93
   2 ?   -1.9   0.0       1.8     5e+03      37      53 ..      61      77 ..      59      78 .. 0.72

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 2.1e-10
   PF13637.1 15 elvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                ++v++ +e+g+++n+td+ G t+L +Aa +gn+ ++  Ll
  MMETSP1325-20131115|9232_1  2 KMVEWFIEHGANVNHTDRGGHTPLEFAAAAGNMIVVTILL 41
                79******************************98888776 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 1.8
   PF13637.1 37 aLhiAalrgnieilklL 53
                +L++A  +++++ + +L
  MMETSP1325-20131115|9232_1 61 PLDVAGVNERVHRILML 77
                77778777787777666 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0    0.0001      0.28      16      30 .]       2      16 ..       1      16 [. 0.92
   2 !   11.8   0.0   7.5e-05       0.2       2      28 ..      21      47 ..      20      48 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0001
   PF13606.1 16 elveaLlengadina 30
                ++ve+ +e+ga++n+
  MMETSP1325-20131115|9232_1  2 KMVEWFIEHGANVNH 16
                69***********97 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 7.5e-05
   PF13606.1  2 GnTpLhlAasngrielveaLlengadi 28
                G TpL  Aa  g++ +v +Ll++ga +
  MMETSP1325-20131115|9232_1 21 GHTPLEFAAAAGNMIVVTILLNAGATV 47
                89**********************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|9234_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|9230_1  [L=421]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-18   66.1   0.0    4.3e-18   64.8   0.0    1.7  2  PF00679.19 Elongation factor G C-terminus
    8.5e-11   41.7   2.3      2e-10   40.5   1.6    1.7  1  PF03144.20 Elongation factor Tu domain 2


Domain annotation for each model (and alignments):
>> PF00679.19  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0         1   6.9e+03       3      17 ..     116     130 ..     115     142 .. 0.79
   2 !   64.8   0.0   6.2e-22   4.3e-18       3      87 ..     211     296 ..     209     298 .. 0.96

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1
  PF00679.19   3 lEPimeveievpeey 17 
                  EP +++++ v+++ 
  MMETSP1325-20131115|9230_1 116 EEPTVRMTLGVNKSP 130
                 699999999888664 PP

  == domain 2    score: 64.8 bits;  conditional E-value: 6.2e-22
  PF00679.19   3 lEPimeveievpeeylgkvisdltkrrGeilsmena.genrvvieaevPlaeligysteLrslTsGrgsfslefsgYepvpgekle 87 
                 +EP++++e +vp+ey+g+v+  +++r+Ge+++m  + +++++ i++ +P+++++g+++ L ++T+G+ +++  f++Y+p  ge  +
  MMETSP1325-20131115|9230_1 211 CEPWEQIECTVPDEYTGSVVDMMARRKGELIDMAANaADGMTAIKYLLPTRGVLGLRNALLTATRGTVIIDSNFDSYRPFAGELET 296
                 7**********************************97899***************************************9999765 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   1.6   2.9e-14     2e-10       1      73 [.      32     101 ..      32     102 .. 0.92

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 2.9e-14
                 EEEEEEEEEE--EETTEEEEEET.TTCTEEEEEEEEEEEEETTCEESEEECEE--EEEESSSGGGGGTT---EE CS
  PF03144.20   1 GtvatgrvysGtlkkGdtvrilg.ndtskkeivtrvrsletfngdldeavaganaGvivaikgledaiikGdtl 73 
                 G ++ grv+sG +k+G+tv + +     +k ++++v+ l++f +  ++ v+ a+aG iv i gl d ++ G+t+
  MMETSP1325-20131115|9230_1  32 GKLSIGRVQSGSIKVGQTVGFTRpD---EKVETGKVSELFVFDKLGRKNVDVAEAGEIVMIAGLPD-VQIGQTI 101
                 77899****************5555...55677*********************************.9*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.38s 00:00:01.08 Elapsed: 00:00:00.55
# Mc/sec: 1834.30
//
Query:       MMETSP1325-20131115|9235_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2493  (0.182343); expected 273.4 (0.02)
Passed bias filter:                      479  (0.0350351); expected 273.4 (0.02)
Passed Vit filter:                       188  (0.0137507); expected 13.7 (0.001)
Passed Fwd filter:                        83  (0.0060708); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 3.30u 0.48s 00:00:03.78 Elapsed: 00:00:01.38
# Mc/sec: 661.60
//
Query:       MMETSP1325-20131115|9237_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.8e-48  163.7   6.0    1.8e-37  128.8   2.3    2.0  2  PF03219.9 TLC ATP/ADP transporter


Domain annotation for each model (and alignments):
>> PF03219.9  TLC ATP/ADP transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   2.3e-13   3.2e-09      55      92 ..       3      40 ..       1      45 [. 0.92
   2 !  128.8   2.3   1.3e-41   1.8e-37      86     194 ..     113     220 ..     107     221 .] 0.94

  Alignments for each domain:
  == domain 1    score: 35.6 bits;  conditional E-value: 2.3e-13
   PF03219.9 55 igaevipFlKvwlvlPsavlftliYakLsnrlskekvF 92
                +gae+ipFlK+++ lP+a+ ft++Y+ L+n+l  +kv 
  MMETSP1325-20131115|9237_1  3 AGAEIIPFLKTYVQLPGAIAFTVVYSSLCNMLPPDKVS 40
                69******************************999985 PP

  == domain 2    score: 128.8 bits;  conditional E-value: 1.3e-41
   PF03219.9  86 lskekvFyiivlaflvffllFafvlyPlrellhleaeadkllsilppglkgfiaivrkWsyalfYvlaELwgsvvlslLfWqfaneitkveeakrFYslfglvanlali 194
                  ++ kvF +++l+fl f+ lF+f lyP r+l+h++a a++l+ il p+l + iai+r+Ws++ fY++aELwgsvvls+LfW+ an +++v+eak++Y+lfgl+an+al+
  MMETSP1325-20131115|9237_1 113 TTTLKVFLATLLPFLGFYSLFSFALYPARDLIHPHALATNLADIL-PKLAAPIAIIRNWSFSAFYLFAELWGSVVLSVLFWGQANAVMNVNEAKKYYPLFGLGANVALL 220
                 56679*********************************9998886.67999*******************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1080.81
//
Query:       MMETSP1325-20131115|9240_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.53
# Mc/sec: 809.34
//
Query:       MMETSP1325-20131115|9238_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-06   27.2   0.1      0.014   14.6   0.0    2.5  2  PF00018.23 SH3 domain
    7.3e-05   22.0   0.0    0.00012   21.4   0.0    1.3  1  PF07653.12 Variant SH3 domain
    0.00078   18.9   0.0     0.0016   17.9   0.0    1.5  1  PF08239.6  Bacterial SH3 domain


Domain annotation for each model (and alignments):
>> PF00018.23  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0     3e-06     0.014       1      22 [.      14      35 ..      14      43 .. 0.85
   2 !   10.2   0.0   7.2e-05      0.33      26      47 ..      49      68 ..      44      69 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3e-06
                EESS-BE-SSTTS-EB-TT-EE CS
  PF00018.23  1 iAlYDYearesdELsfkkGDvi 22
                ++lYD+ea+e++EL+   G ++
  MMETSP1325-20131115|9238_1 14 KVLYDFEAQEDGELPVSAGTIV 35
                68**************999665 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 7.2e-05
                EESSSSEEEEEETTTTB---EE CS
  PF00018.23 26 eksedgWwkgrlkgtgkeGliP 47
                ++++dgW+ ++    g+ G++P
  MMETSP1325-20131115|9238_1 49 DDENDGWMLVEFG--GQSGYVP 68
                67899********..79***** PP

>> PF07653.12  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   2.6e-08   0.00012       2      54 ..      13      74 ..      12      75 .. 0.92

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 2.6e-08
                EEE-S-B--SS-----B----EEEEE..........E-S----BEEEE-TT---B--HHHHH CS
  PF07653.12  2 vraiedyvaedpeeLslkkGDvikvl.........gskesdgwwegesgGrvGlfPsslVee 54
                ++++ d++a+  +eL + +G ++ +           + e+dgw+++e gG+ G++P  ++e+
  MMETSP1325-20131115|9238_1 13 FKVLYDFEAQEDGELPVSAGTIVVLSpgedgvfgtADDENDGWMLVEFGGQSGYVPEAYLEK 74
                69999****************99999999999988788888****************99987 PP

>> PF08239.6  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   3.5e-07    0.0016      29      51 ..      49      72 ..      42      73 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 3.5e-07
   PF08239.6 29 geeng.WykieyngktGYvssdyv 51
                ++en+ W ++e++g+ GYv   y+
  MMETSP1325-20131115|9238_1 49 DDENDgWMLVEFGGQSGYVPEAYL 72
                445555*************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       984  (0.0719719); expected 273.4 (0.02)
Passed bias filter:                      546  (0.0399356); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.36s 00:00:01.06 Elapsed: 00:00:00.52
# Mc/sec: 1553.02
//
Query:       MMETSP1325-20131115|9242_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          3    7.8   8.6        3.6    7.6   6.0    1.1  1  PF12067.3 Sox C-terminal transactivation domain


Domain annotation for each model (and alignments):
>> PF12067.3  Sox C-terminal transactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.0   0.00026       3.6      42     112 ..      15      84 ..       4      91 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00026
   PF12067.3  42 pslqedcaalpaysynseyapeeasasallrelavs.eaqqqespasllgcpaspalYygqlyspehakthp 112
                 p+       +p+ ++n++   + ++ +++ +  + + + +  +sp++++g+ +sp+ ++gq ++p  +++hp
  MMETSP1325-20131115|9242_1  15 PHQYHQGGLMPPTGFNHQLGTSPHQMGMMHGGPPTQgYPMMGTSPHQAMGMSTSPHQFHGQYMPP--PPPHP 84 
                 4444555567999*****9888888887777766551556667889************9999999..55666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|9243_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.039   13.5   0.1      0.069   12.7   0.1    1.5  1  PF13855.1  Leucine rich repeat
        5.9    7.1   6.2        5.2    7.3   2.4    2.3  2  PF00066.12 LNR domain


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1     1e-05     0.069      13      57 ..       3      48 ..       1      51 [. 0.82

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1e-05
   PF13855.1 13 lkvipdgaFkglsnLkvLdLsgnnlksispeafkg.LpsLreLnLs 57
                +++++++ + gl+n k + L+ n l  ++p +f++ +++L +L + 
  MMETSP1325-20131115|9243_1  3 ISDLEQRQLRGLDNTKIIFLNFNTLALFDPAIFAKpTRHLGYLWVT 48
                8899**************************9987624566666555 PP

>> PF00066.12  LNR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.18   1.2e+03      13      21 ..      61      70 ..      49      80 .. 0.59
   2 ?    7.3   2.4   0.00076       5.2      17      34 ..      85     105 ..      72     106 .] 0.79

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.18
                HHTT.T---- CS
  PF00066.12 13 ekkf.gdgvC 21
                 ++f gd vC
  MMETSP1325-20131115|9243_1 61 LNTFpGDVVC 70
                4556666666 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.00076
                 T-------...--SCCCTT-- CS
  PF00066.12  17 gdgvCDee...CnnaeCqfDG 34 
                  dg+C+      ++aeCq+DG
  MMETSP1325-20131115|9243_1  85 DDGICNGRkkgYSTAECQWDG 105
                 68888854444789******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 529.20
//
Query:       MMETSP1325-20131115|9246_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-10   38.3   0.4    5.7e-10   38.2   0.3    1.0  1  PF00083.19 Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> PF00083.19  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.3   4.2e-14   5.7e-10     392     447 ..       3      57 ..       1      61 [. 0.94

  Alignments for each domain:
  == domain 1    score: 38.2 bits;  conditional E-value: 4.2e-14
  PF00083.19 392 aanwlanfligllfpiiteaigggyvflvfagllvlfilfvfffvpetkgrtleei 447
                 ++nw +nf++g+ fp++  ++g +++fl f ++lv+ ++fv+  +pet g+t +e+
  MMETSP1325-20131115|9246_1   3 QVNWFCNFVVGVGFPYLQASLG-PWSFLPFGAVLVACLVFVLTRMPETLGLTPKEV 57 
                 68*******************9.***************************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|9247_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       472  (0.0345231); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|9248_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00051   19.6   0.4    0.00075   19.0   0.3    1.3  1  PF00801.15 PKD domain


Domain annotation for each model (and alignments):
>> PF00801.15  PKD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.3   5.5e-08   0.00075      28      67 ..      23      77 ..       4      78 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 5.5e-08
                EEEE---...............--EE-SSSEEEE-S----EEEEEEEEE----EE CS
  PF00801.15 28 ylWdfgD...............gqtltgpnvthtynkpGtYtVtltvsnavgsat 67
                 +W+                   ++l+g+ vth +++p tY+V+ t + ++g+++
  MMETSP1325-20131115|9248_1 23 CSWTILQktgiddssiydynesPTILSGQYVTHMFTSPATYHVSSTCTTTLGNVH 77
                5566666666666777777778899*******************99999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 821.61
//
Query:       MMETSP1325-20131115|9251_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-42  145.2   0.3    1.5e-42  145.1   0.2    1.0  1  PF01218.13 Coproporphyrinogen III oxidase


Domain annotation for each model (and alignments):
>> PF01218.13  Coproporphyrinogen III oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.1   0.2   1.1e-46   1.5e-42      24     140 ..       2     124 ..       1     125 [] 0.93

  Alignments for each domain:
  == domain 1    score: 145.1 bits;  conditional E-value: 1.1e-46
                 SS--EEE-----------BEE------EEE--EE---B-----HHHHHHTGGG-TT-..........-EEEE-EEEEEEESSTTS-EEEEEEEEEEES----EEEEEB----EEE-SS--TT---HH CS
  PF01218.13  24 kakfkedewereegGgGisrvleeGkvfEkagvnvsvvsgellpeaasakraelaga..........kfeaagvslviHpknPlvPtvhlnvRlfvaekegeekawWfGGGaDltPlylfeedakhf 140
                 k kfked wer++gGgGisrv++ G+vfEkag+++svv+g ++pea++++ ++ a++          +f+a+g+s v+Hp+nP++Pt+h+n+R+f    e+   +wWfGGG+D+tP ylfeed+khf
  MMETSP1325-20131115|9251_1   2 KGKFKEDVWERPNGGGGISRVMSGGDVFEKAGCSLSVVYGAMPPEAVASATERGADRakgmkpgekvPFFACGLSSVMHPRNPMAPTMHFNYRYF----ETDGGVWWFGGGTDITPAYLFEEDMKHF 124
                 569******************************************9998887776666677888888****************************....66789**********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 651.18
//
Query:       MMETSP1325-20131115|9249_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.073   11.4  10.1      0.098   11.0   7.0    1.1  1  PF05701.6 Plant protein of unknown function (DUF827)


Domain annotation for each model (and alignments):
>> PF05701.6  Plant protein of unknown function (DUF827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   7.0   7.1e-06     0.098     341     399 ..     111     169 ..      99     171 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 7.1e-06
   PF05701.6 341 elvelslklqqlsseaeeakkeAeeareeveklkeeaeqtkaaleeaelrLeaalkeae 399
                  + e  +k q+++ ea++ak+ +  + ++v++ +ee e++   ++  e+rL+a+++e+e
  MMETSP1325-20131115|9249_1 111 TALEQQKKAQKAKMEAKKAKSGSFFSSKKVDETTEEDEDAVHTMQLSEKRLQATKRENE 169
                 456778999***********************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1318  (0.0964014); expected 273.4 (0.02)
Passed bias filter:                      683  (0.0499561); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 933.58
//
Query:       MMETSP1325-20131115|9252_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 588.67
//
Query:       MMETSP1325-20131115|9250_1  [L=379]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-37  126.0   0.5      2e-05   24.0   0.0    9.0  9  PF00514.18 Armadillo/beta-catenin-like repeat
    2.9e-08   33.7   9.7       0.21   11.7   0.0    4.7  4  PF13646.1  HEAT repeats
    0.00012   20.0   0.0      0.055   11.3   0.0    2.1  2  PF05804.7  Kinesin-associated protein (KAP)
  ------ inclusion threshold ------
          1    9.9  12.7         32    5.1   0.1    5.5  7  PF13513.1  HEAT-like repeat


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   6.7e-06     0.023       3      37 ..       3      37 ..       1      41 [. 0.93
   2 !   16.1   0.0   1.9e-06    0.0064       1      37 [.      42      78 ..      42      81 .. 0.95
   3 !   16.6   0.1   1.3e-06    0.0044       1      41 []      83     123 ..      83     123 .. 0.96
   4 !    7.6   0.0   0.00091       3.1       7      40 ..     130     163 ..     126     164 .. 0.90
   5 !   13.7   0.0   1.1e-05     0.036       3      41 .]     167     205 ..     165     205 .. 0.93
   6 !   24.0   0.0     6e-09     2e-05       2      40 ..     206     244 ..     205     245 .. 0.94
   7 !   13.9   0.0   9.4e-06     0.032       4      31 ..     251     278 ..     249     283 .. 0.91
   8 ?    2.3   0.0     0.044   1.5e+02       7      40 ..     297     330 ..     293     331 .. 0.86
   9 !    5.8   0.0    0.0033        11       2      32 ..     333     363 ..     332     371 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 6.7e-06
                HHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHH CS
  PF00514.18  3 enkqavieaGavppLvqLLksgdeevqeeAawALs 37
                en+ +v ++G+++ Lv+L +s  +  q++Aa  L+
  MMETSP1325-20131115|9250_1  3 ENHTTVYRQGGLQSLVDLTSSAEDVCQRYAAMGLR 37
                899****************************9887 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 1.9e-06
                CHHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHH CS
  PF00514.18  1 spenkqavieaGavppLvqLLksgdeevqeeAawALs 37
                +pe + ++++++ v p+++L  s+  e q+ Aa+AL 
  MMETSP1325-20131115|9250_1 42 NPEVRVYIVKENMVAPFLALAESPLLEYQRTAATALA 78
                7999*******************************96 PP

  == domain 3    score: 16.6 bits;  conditional E-value: 1.3e-06
                 CHHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHHT CS
  PF00514.18   1 spenkqavieaGavppLvqLLksgdeevqeeAawALsNLaa 41 
                 s enk+ ++++G++++ +++   +d +v+++++ AL NLa+
  MMETSP1325-20131115|9250_1  83 SEENKAPLVRQGGLRQILACCLYEDLQVVRDCTFALANLAD 123
                 579************************************95 PP

  == domain 4    score: 7.6 bits;  conditional E-value: 0.00091
                 HHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   7 avieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                  ++++G+v++L +    +d +vq++ a+A   L+
  MMETSP1325-20131115|9250_1 130 DIVREGGVEVLARIGAADDARVQRDVARAFASLS 163
                 5889*************************99987 PP

  == domain 5    score: 13.7 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHHT CS
  PF00514.18   3 enkqavieaGavppLvqLLksgdeevqeeAawALsNLaa 41 
                 + k+++i++Ga+p L +L +s d   q++++ A++N+++
  MMETSP1325-20131115|9250_1 167 DVKATMINQGALPTLFKLARSLDIASQRYSTLAMCNMSS 205
                 67899*******************************986 PP

  == domain 6    score: 24.0 bits;  conditional E-value: 6e-09
                 HHHHHHHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   2 penkqavieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                 + +k +++++Ga++pL+ L + +d e+q++Aa AL+ La
  MMETSP1325-20131115|9250_1 206 SAHKVQIVDEGAIRPLMFLARFPDLEIQRYAALALGGLA 244
                 67899******************************9887 PP

  == domain 7    score: 13.9 bits;  conditional E-value: 9.4e-06
                 HHHHHHHCHHHHHHHHHHC-SSHHHHHH CS
  PF00514.18   4 nkqavieaGavppLvqLLksgdeevqee 31 
                 nk  ++e+Ga++pL+++ + +d+++q+ 
  MMETSP1325-20131115|9250_1 251 NKVRIVEEGALRPLIDMVRFPDTDMQRC 278
                 7888**********************96 PP

  == domain 8    score: 2.3 bits;  conditional E-value: 0.044
                 HHHHCHHHHHHHHHHC-SSHHHHHHHHHHHHHHH CS
  PF00514.18   7 avieaGavppLvqLLksgdeevqeeAawALsNLa 40 
                  v ++ ++ pL++L + +d++  ++ + AL+ L+
  MMETSP1325-20131115|9250_1 297 SVMHEEGLLPLMALVDGNDQDCIRAGVYALGTLC 330
                 6777788899*************99999999888 PP

  == domain 9    score: 5.8 bits;  conditional E-value: 0.0033
                 HHHHHHHHHCHHHHHHHHHHC-SSHHHHHHH CS
  PF00514.18   2 penkqavieaGavppLvqLLksgdeevqeeA 32 
                 +e k+ ++e Ga+   v+    gd ev+++A
  MMETSP1325-20131115|9250_1 333 DEVKARIVELGAIASVVHQAAQGDIEVKRAA 363
                 788999***********************99 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1   6.1e-05      0.21       3      69 ..      16      92 ..      14     119 .. 0.70
   2 !    8.1   0.4   0.00085       2.9      21      73 ..     115     187 ..      95     201 .. 0.68
   3 !   11.7   0.0   6.1e-05      0.21      26      81 ..     211     278 ..     178     288 .. 0.71
   4 !    6.3   0.1    0.0031        11       4      59 ..     307     371 ..     304     376 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 6.1e-05
   PF13646.1  3 aLlaaLekdpdpevraaaieaLg..........qlgseealpaLlelLkdsdpevRraAaeaLgklg.dpealpaLlk 69
                 L++ L++++++  ++ a++ L            +  e+++++ l+l++++  e +r+Aa aL+ +  ++e  ++L++
  MMETSP1325-20131115|9250_1 16 SLVD-LTSSAEDVCQRYAAMGLRflasnpevrvYIVKENMVAPFLALAESPLLEYQRTAATALASFTlSEENKAPLVR 92
                5666.437777888899******54333333333333366************************99744555555544 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00085
   PF13646.1  21 ieaLgqlgse...ea.......lpaLlelLkdsdpevRraAaeaLgklg..........dpealpaLlklldd 73 
                   aL++l+++   ++       ++ L +    +d++v+r +a+a + l+          ++ alp+L kl+++
  MMETSP1325-20131115|9250_1 115 TFALANLADSldlQTdivreggVEVLARIGAADDARVQRDVARAFASLSvsedvkatmiNQGALPTLFKLARS 187
                 5566654444333113333333888888888999999999999999996555555666667788888888766 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 6.1e-05
   PF13646.1  26 qlgseealpaLlelLkdsdpevRraAaeaLgkl..g..........dpealpaLlklldddedavvre 81 
                 q+ +e a+ +L  l++ +d e++r Aa aLg l  g          ++ al++L+++ + ++ +  r+
  MMETSP1325-20131115|9250_1 211 QIVDEGAIRPLMFLARFPDLEIQRYAALALGGLalGdhgdnkvrivEEGALRPLIDMVRFPDTDMQRC 278
                 667889999999999***************98744244444555545668888888888776555444 PP

  == domain 4    score: 6.3 bits;  conditional E-value: 0.0031
   PF13646.1   4 LlaaLekdpdpevraaaieaLgqlgse..........ealpaLlelLkdsdpevRraAaeaLgklg 59 
                 L a++ + +d +  +a ++aLg+l ++           a++ +++ +   d ev+raA + L++l+
  MMETSP1325-20131115|9250_1 307 LMALV-DGNDQDCIRAGVYALGTLCEDdevkarivelGAIASVVHQAAQGDIEVKRAAGYFLARLS 371
                 55544.88999999999*****654433444444444669999999999***********999986 PP

>> PF05804.7  Kinesin-associated protein (KAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   1.6e-05     0.055     312     450 ..      77     216 ..      24     230 .. 0.47
   2 !    6.8   0.0   0.00035       1.2     317     416 ..     247     350 ..     240     362 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.6e-05
   PF05804.7 312 lkklsifdenkdemeeldivekllkllpiehedllkvtlklllnlsfdtklrrkmvkaGllPklvslldddkkk..gialkvlyhlslddkvksmfaytdcikllmkalleslnekvdleliallinlalnkrnaqliveG 450
                 l  +++ +enk  +++++ + ++l     e+ ++++     l nl+   +l++ +v+ G +  l+ + + d+ +  + + + +  ls+ ++vk+ +    +++ l k   +          +a++ n++   + +q++ eG
  MMETSP1325-20131115|9250_1  77 LASFTLSEENKAPLVRQGGLRQILACCLYEDLQVVRDCTFALANLADSLDLQTDIVREGGVEVLARIGAADDARvqRDVARAFASLSVSEDVKATMINQGALPTLFKLARSLDIASQRYSTLAMC-NMSSSAHKVQIVDEG 216
                 55555555555555555555554444444444444444444445554445555555555555555443333221002233344445555555555555555555444332222222222223333.555555555555444 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.00035
   PF05804.7 317 ifdenkdemeeldivekllkllpiehedllkvtlklllnlsfdtklrrk...mvkaGllPklvslldddkkk.gialkvlyhlslddkvksmfaytdcikllmk 416
                   ++nk  ++e++ +  l+ +++  ++d+ +     +  +++  +  +k   m + GllP ++ + ++d+   +  +  l  l  dd+vk+ +    +i  +++
  MMETSP1325-20131115|9250_1 247 DHGDNKVRIVEEGALRPLIDMVRFPDTDMQRCSSLAVNAVALGPQGVTKtsvMHEEGLLPLMALVDGNDQDCiRAGVYALGTLCEDDEVKARIVELGAIASVVH 350
                 5689*************************998866666666655443333338899****998776666653134577888999*******9998888877665 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.54   1.8e+03      44      50 ..      27      34 ..      10      54 .. 0.59
   2 ?    5.1   0.1    0.0092        32       4      50 ..      70     116 ..      68     121 .. 0.81
   3 ?    2.2   0.1      0.08   2.7e+02       3      34 ..     132     163 ..     130     174 .. 0.63
   4 ?    3.8   0.0     0.024        82       2      37 ..     150     185 ..     149     197 .. 0.88
   5 ?    2.1   0.0     0.081   2.8e+02      40      53 ..     228     241 ..     216     243 .. 0.70
   6 ?    4.1   0.1      0.02        68       3      42 ..     232     273 ..     230     289 .. 0.75
   7 ?   -0.4   0.1      0.49   1.7e+03       6      18 ..     321     333 ..     320     370 .. 0.58

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.54
   PF13513.1 44 V.ReaAaw 50
                V +++Aa 
  MMETSP1325-20131115|9250_1 27 VcQRYAAM 34
                33444443 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0092
   PF13513.1   4 RraAawaLGr....laggeprllepavpellpaLlelLedddd.eV.ReaAaw 50 
                 +r Aa aL++     ++ +p   +  + ++l++ l      +d +V R++   
  MMETSP1325-20131115|9250_1  70 QRTAATALASftlsEENKAPLVRQGGLRQILACCL-----YEDlQVvRDC-TF 116
                 899*****99**99888999999999999999999.....8888884554.44 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.08
   PF13513.1   3 vRraAawaLGrlaggeprllepavpellpaLl 34 
                 vR++ + +L+r+ +  +  ++  v  + + L+
  MMETSP1325-20131115|9250_1 132 VREGGVEVLARIGAADDARVQRDVARAFASLS 163
                 77777777777665566666666666666665 PP

  == domain 4    score: 3.8 bits;  conditional E-value: 0.024
   PF13513.1   2 rvRraAawaLGrlaggeprllepavpellpaLlelL 37 
                 rv+r +a+a+++l + e+  +  +++ +lp L +l 
  MMETSP1325-20131115|9250_1 150 RVQRDVARAFASLSVSEDVKATMINQGALPTLFKLA 185
                 89****************999999999999998776 PP

  == domain 5    score: 2.1 bits;  conditional E-value: 0.081
   PF13513.1  40 dddeVReaAawALg 53 
                 +d e++++Aa+ALg
  MMETSP1325-20131115|9250_1 228 PDLEIQRYAALALG 241
                 55588999999998 PP

  == domain 6    score: 4.1 bits;  conditional E-value: 0.02
   PF13513.1   3 vRraAawaLGr..laggeprllepavpellpaLlelLedddd 42 
                 ++r Aa+aLG   l   +++ ++ + + +l +L+++ + +d 
  MMETSP1325-20131115|9250_1 232 IQRYAALALGGlaLGDHGDNKVRIVEEGALRPLIDMVRFPDT 273
                 78999****998888888888888888888888877766554 PP

  == domain 7    score: -0.4 bits;  conditional E-value: 0.49
   PF13513.1   6 aAawaLGrlagge 18 
                 a ++aLG+l++  
  MMETSP1325-20131115|9250_1 321 AGVYALGTLCEDD 333
                 5677777766332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 1780.82
//
Query:       MMETSP1325-20131115|9253_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-29  102.1   0.0    1.6e-29  101.7   0.0    1.1  1  PF07717.11 Oligonucleotide/oligosaccharide-binding (OB)-fold
  ------ inclusion threshold ------
      0.017   14.6   0.1       0.02   14.4   0.0    1.2  1  PF00596.16 Class II Aldolase and Adducin N-terminal domain


Domain annotation for each model (and alignments):
>> PF07717.11  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.7   0.0   2.3e-33   1.6e-29       2     111 .]      25     126 ..      24     126 .. 0.95

  Alignments for each domain:
  == domain 1    score: 101.7 bits;  conditional E-value: 2.3e-33
                 HHHHHHHHTT----......---TTSTTHHHHHHHHHH---TTSEEE.------EETT.G-B-EE-TTS---..---.SEEEEEEEEESSSEEEEEEEE--HHHHHHH-TTT CS
  PF07717.11   2 QLrelledlglkeeaakasrssenesakdaellrkallaGlypniarldekgdYktvr.kqrvfiHpsSvla.ekkppewvvyaelvetsklymrnvtaiepewllllapki 111
                 QL++l+e+++++            + ++d e++ ka++aG++++ a+l ++g+Y+tv+  ++v+iHpsS++   +  p+w++y+el +tsk+ymr+v++i+pewl+++ap++
  MMETSP1325-20131115|9253_1  25 QLEGLCERVEVE----------MLSGQQDTEAMCKAMAAGFFYHTAKLAQSGEYRTVKhAHTVYIHPSSCMSrDEDMPPWLLYHELAFTSKEYMRQVCPIKPEWLVEIAPHY 126
                 9**********8..........5789**********************************************955566********************************97 PP

>> PF00596.16  Class II Aldolase and Adducin N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.9e-06      0.02      64     120 ..      46     105 ..       8     132 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.9e-06
                 TS-SB-.TTHHHHHHHHHH.TTSSEEEE---CCCHCCCCSS..S...S..SCHHHCCHHH CS
  PF00596.16  64 kglkps.setplHaaiyrarpdvravvHtHspaavalsall.keglpp.ltqeaaalylg 120
                 +  k+  + ++ H+a  ++  + r v H+H++++ + s+++ +e +pp l +++ a++ +
  MMETSP1325-20131115|9253_1  46 AMCKAMaAGFFYHTAKLAQSGEYRTVKHAHTVYIHPSSCMSrDEDMPPwLLYHELAFTSK 105
                 3333435999****************************9998666777755555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.57
# Mc/sec: 570.17
//
Query:       MMETSP1325-20131115|9254_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       576  (0.0421299); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 673.02
//
Query:       MMETSP1325-20131115|9255_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|9244_1  [L=272]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 1207.05
//
Query:       MMETSP1325-20131115|9258_1  [L=325]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-41  140.7   0.0      2e-40  138.6   0.0    1.8  1  PF00454.22 Phosphatidylinositol 3- and 4-kinase


Domain annotation for each model (and alignments):
>> PF00454.22  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.6   0.0   1.5e-44     2e-40       2     229 ..      54     261 ..      53     267 .. 0.94

  Alignments for each domain:
  == domain 1    score: 138.6 bits;  conditional E-value: 1.5e-44
                 EEEEE-----HHHHHHHHHHHHHHHHHHHCTT---------B--SSS----EE--TTEEEHHHHHCH--------T.....................THHHHHHHHHSSSHHHHHH.....HHHHHHHHH---HHHHHH-------CCCEEE.E----EEE--------.----SSSS--SS---HHHHHH-------SHHHHHHHHHHHHHHHHHHCTHHHHHHHHHCCCCS- CS
  PF00454.22   2 safifkggadlrqdervlqlvrlfnkllsgegalrelaaYlviplasksglielvdsaltlaevprtdlvkkesknfndkrkkkvklfelqkkkkpkvgslqlFlkeypdaeefle.....arsqfarslaklsvldyilgngDRhldNilvdkktgklvhIDfGlclp.skheekpelvpfrltrpfseemreyldpskdeglfresceeilealrrdqdlltrlLqafveig 229
                 +++++k+g+d rqd++v ql+ + +k+l++ g++++l++Y+v+++++ sgl+e++   ++ +  p   +  ++                       +  +l++F k+ypd+ +++      ++ +fa+s a+++v+++ilg+gDRhldN ++  ++g+  hIDfG++l+  +  + + ++pfr+t+ ++++m++  ++ ++++ f+++c++++  lrr++ l+ +l +++ + g
  MMETSP1325-20131115|9258_1  54 YKVMLKNGDDVRQDQLVIQLFLVRDKILKQVGLDLKLRPYRVLATGPTSGLLEFIAADDGSSSMPVSMVLAEN-----------------------RGSFLEFFKKKYPDPNNVGFgvedsVMMTFAKSSAGYAVITFILGIGDRHLDNVMM-LDDGHFLHIDFGYILGdDPKKKLVAPPPFRFTKSMVDAMGG--PNGRYFEQFQKYCVQAYLQLRRHASLIYSLCNLMTDAG 261
                 799**************************************************************99973333.......................68999**********88877777779*****************************8.****************9999999****************99..***************************99998887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 1527.09
//
Query:       MMETSP1325-20131115|9261_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   14.3   0.0      0.034   13.9   0.0    1.3  1  PF13911.1 AhpC/TSA antioxidant enzyme


Domain annotation for each model (and alignments):
>> PF13911.1  AhpC/TSA antioxidant enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.5e-06     0.034      87     115 .]      36      90 ..       3      90 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.5e-06
   PF13911.1  87 k...........................dagyltqrGGtflfdadgevlyehrdrg 115
                 +                             +   ++GG f+f +++e l eh+d++
  MMETSP1325-20131115|9261_1  36 LdaitgkpwnpgpytplmakgkglfdprAVEKTLVQGGSFVF-KGRETLLEHYDES 90 
                 35566666666666666666666666666889999*******.66799*****985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 733.58
//
Query:       MMETSP1325-20131115|9259_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-34  119.6   0.0    1.7e-34  119.4   0.0    1.0  1  PF11838.3 Domain of unknown function (DUF3358)


Domain annotation for each model (and alignments):
>> PF11838.3  Domain of unknown function (DUF3358)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.0   1.3e-38   1.7e-34      97     324 .]      10     242 ..       4     242 .. 0.95

  Alignments for each domain:
  == domain 1    score: 119.4 bits;  conditional E-value: 1.3e-38
   PF11838.3  97 rkealkkfvrklvaplleklgwepgessdhqeaqlralllslag....gdeevsaeakklfkalldgteslklsidpdlrwsvfnalaangnakeykeilaelkrdksadgqeaalralaavpdpelkakalnfvltn....dsisnqdlelalaglaksnqkgrellwewveqnfdalakkwerkgs.alsrvvgltpsnfssaelldkvekflaekekklpglrrslaealdsve 324
                 ++ a+ +f  k+vap+++k+gwe + ++ h   +lr +l+sl g    +d+ v a+a+ +++a+++ ++    ++++dl+ sv+++++++g+++e++++   l +    ++++ ++ +++a+ d +lk+++l+++  +     +++ qd++++++++ +s+ +g  l+w+++++nf  l++ ++++++ +++  +  ++++f+++e + ++e+f+  k++ lp++ r +a+++++v+
  MMETSP1325-20131115|9259_1  10 LQPAFAAFAAKMVAPAAAKVGWEESADDGHLGKLLRTTLVSLQGrfsgSDPAVAAKARSMWDAYFEDPSG--DALPSDLKLSVYKLVLKTGGEAEFEQLMGHLDTLEANAERKLIFNSIGATGDVALKRRVLEWCYPDekggGNLKLQDFFYPIGSVSQSSGEGLSLAWSYYKENFSTLKAALAKASPsLMDAAIVYSVAGFATDEAAGEIEEFF--KTNPLPQSARKIAQTVEGVR 242
                 5556889999*********************************9**********************7555..7***************************************************************95555577*********************************************999999999999**************..9999*************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 1282.76
//
Query:       MMETSP1325-20131115|9262_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.32s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 874.95
//
Query:       MMETSP1325-20131115|9263_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       545  (0.0398625); expected 273.4 (0.02)
Passed bias filter:                      444  (0.0324751); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.56
# Mc/sec: 860.12
//
Query:       MMETSP1325-20131115|9264_1  [L=530]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-14   52.2   0.0    4.2e-14   52.0   0.0    1.1  1  PF06398.6  Integral peroxisomal membrane peroxin
    7.3e-11   41.2   0.2    6.8e-06   25.3   0.0    2.7  2  PF02845.11 CUE domain
    8.3e-08   32.2   0.0    1.3e-07   31.6   0.0    1.3  1  PF00169.24 PH domain
  ------ inclusion threshold ------
       0.15   11.9   0.0       0.93    9.4   0.0    2.0  2  PF04519.8  Polymer-forming cytoskeletal


Domain annotation for each model (and alignments):
>> PF06398.6  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.0   1.2e-17   4.2e-14     218     359 .]     338     470 ..     266     470 .. 0.75

  Alignments for each domain:
  == domain 1    score: 52.0 bits;  conditional E-value: 1.2e-17
   PF06398.6 218 kkenlkkelesketkdiildespetrskpvrftveifEnqrrwllgkgWtsslfsyerydwtdearialnevpsgvdhledvkpPedWeWvekkkWrlDlepdewveeteekdGWvYd.......dnk.wkeest.edglskytRRRrwiR 359
                  ++n  k++ ++ +  +++de ++      ++++e+fEnqr+ +++ gW ++ ++ er ++ +    +++  +s   ++ dv +P +  W +  +Wr+D++      +t+ + GW+Y          +    +s+ ++ + + tRRRrw R
  MMETSP1325-20131115|9264_1 338 SEANAWKNVLQQMQMMMVPDEFQTGD---DTVECEVFENQRYGMIK-GWGPNFLPGERLTYSNR---KGEL-SS--LEFPDVRLPGGFMWED--EWRIDTT----YAHTDPD-GWCYGgsfatieA-DlEHGTSNpTNRTFDVTRRRRWLR 470
                 34444444444444455555544444...899***********555.*************9999...3333.33..3599************..9*****7....3344443.9****77776641.2345555568888899******98 PP

>> PF02845.11  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0     2e-09   6.8e-06       4      41 ..     110     145 ..     107     146 .. 0.85
   2 !   13.2   0.0   1.2e-05     0.041       4      32 ..     195     222 ..     192     231 .. 0.88

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 2e-09
                 HHHHHHHHSTTS-HHHHHHHHHHSTTTHHHHHHHHHHC CS
  PF02845.11   4 mletLkemFPdldeevIravLrasngnvEaainaLLeg 41 
                  ++++kemFPdl++  I+a+L++s   v ++i+a L g
  MMETSP1325-20131115|9264_1 110 NVKQVKEMFPDLPVPAIQAALQQSS--VQRVIEAALAG 145
                 589******************7765..88888887776 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHSTTS-HHHHHHHHHHSTTTHH CS
  PF02845.11   4 mletLkemFPdldeevIravLrasngnvE 32 
                 +l++L+++FPd++ ++++a L   +g+++
  MMETSP1325-20131115|9264_1 195 DLMRLQDLFPDIPTSLLQAEL-HVTGSLD 222
                 799**************9998.8888776 PP

>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   3.9e-11   1.3e-07       2     102 ..     246     350 ..     245     352 .. 0.91

  Alignments for each domain:
  == domain 1    score: 31.6 bits;  conditional E-value: 3.9e-11
                 SBEEEEEEEETSSSCEEEEEEEEET..TEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSS...C..TTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24   2 ikeGyllkksellktwkkryfvLts..nyLlyfksskkksykapkgsiplndctvkkasstkfa...l..qkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                  + G+l k   + k++++r+f+L++  + L+y + +++   ++p g++ l + ++  a+++      +    + n  f ++++ + +y l+aese e+++W + l+++
  MMETSP1325-20131115|9264_1 246 ALRGFLIKSDPGGKNFQRRFFILRQltGSLCYARLPED--MSNPLGVVYLFNSRLSGAKDSAAGvvaKfpSVDANSGFSLVTPHR-TYQLFAESESEANAWKNVLQQM 350
                 578*********************************96..********************964255525699*************.******************9986 PP

>> PF04519.8  Polymer-forming cytoskeletal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00027      0.93       2      37 ..     208     243 ..     207     251 .. 0.86
   2 ?   -0.4   0.1       0.3     1e+03      35      52 ..     484     501 ..     471     513 .. 0.53

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00027
   PF04519.8   2 ktligkgtkieGdiefegelridGkveGnikaegkl 37 
                 ++l++++++++G+++f+ +  + G+v++++ a + +
  MMETSP1325-20131115|9264_1 208 TSLLQAELHVTGSLDFSTDTLVTGQVHAEVMAMDPV 243
                 68999************************9986655 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.3
   PF04519.8  35 gklvigesgkveGeikae 52 
                 + ++i  +gk  G i+ +
  MMETSP1325-20131115|9264_1 484 NGVHIDYTGKAAGAITET 501
                 234444444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.88u 0.38s 00:00:01.26 Elapsed: 00:00:00.62
# Mc/sec: 2048.50
//
Query:       MMETSP1325-20131115|9268_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.15   11.8   1.7       0.17   11.6   1.2    1.1  1  PF08349.6  Protein of unknown function (DUF1722)
       0.35   10.4   3.3       0.38   10.3   2.3    1.1  1  PF03105.14 SPX domain
       0.92    9.0   5.4        1.1    8.7   3.7    1.0  1  PF03962.10 Mnd1 family
        1.2    9.0   5.3       0.59   10.0   2.1    1.6  1  PF04568.7  Mitochondrial ATPase inhibitor, IATP
        1.4    9.0   4.5        3.9    7.5   3.1    1.9  1  PF03993.7  Domain of Unknown Function (DUF349)
        3.5    7.8   6.8         24    5.1   4.7    1.9  1  PF12210.3  Hepatocyte growth factor-regulated tyrosine kinase substrate
        8.2    6.0   7.3       0.59    9.7   1.0    2.0  2  PF00831.18 Ribosomal L29 protein


Domain annotation for each model (and alignments):
>> PF08349.6  Protein of unknown function (DUF1722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.2   8.8e-05      0.17      16      73 ..      14      69 ..       4      72 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.8e-05
   PF08349.6 16 GrlvaeakkkeleelleeYeeelmealkkkatrkshtnvlqHilGYfkkklskeekqe 73
                ++l+ e+++    +  + Y e  ++++++ +t k+ht++l H  G+  ++  ++ k++
  MMETSP1325-20131115|9268_1 14 RQLLDERER--RAAAESMYVEIHENLIEHLETLKEHTDALNHGHGHAEESHAEKLKKQ 69
                444444444..3455566777778889999***************9887766666554 PP

>> PF03105.14  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.3   0.00019      0.38     116     172 ..       3      65 ..       1      73 [] 0.66

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00019
  PF03105.14 116 keleerledLekqletlaerrtkksdeykarqeeql........yieaksffsdheamagpsnsv 172
                 +e+ e++e+L++ql   +err+  +++y +  + ++        ++++   ++ h + + + +++
  MMETSP1325-20131115|9268_1   3 EEISEEHEELKRQLLDERERRAAAESMYVE--IHENliehletlKEHTDALNHGHGHAEESHAEK 65 
                 89**************************98..444445666665444444444443333333333 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.7   0.00057       1.1      79     139 ..       3      68 ..       2      72 .. 0.88

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00057
  PF03962.10  79 eelkqrikelqaeiekekkkreet.....eereelleelkeleeelkklkkeleklakldpekvek 139
                 ee++++ +el++++ +e+++r  +     e +e+l+e l++l+e++++l+  +  ++++  ek++k
  MMETSP1325-20131115|9268_1   3 EEISEEHEELKRQLLDERERRAAAesmyvEIHENLIEHLETLKEHTDALNHGHGHAEESHAEKLKK 68 
                 5788999999999999999999888999999999*****************999888888888876 PP

>> PF04568.7  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   2.1    0.0003      0.59      56      96 ..      21      63 ..      18      70 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0003
   PF04568.7 56 krEaAqEeeyfrkkek..eqLakLkekleeeikhhkkeieele 96
                +r aA E +y++ +e+  e L+ Lke+     + h +  e++ 
  MMETSP1325-20131115|9268_1 21 ERRAAAESMYVEIHENliEHLETLKEHTDALNHGHGHAEESHA 63
                5789******98777555*********9984444444444444 PP

>> PF03993.7  Domain of Unknown Function (DUF349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.1     0.002       3.9      20      52 ..      18      51 ..       2      71 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.002
   PF03993.7 20 aafaeldeereenlekKeaLieeaealaestd.w 52
                 +++ +++++   +e  e Lie +e+l+e td  
  MMETSP1325-20131115|9268_1 18 DERERRAAAESMYVEIHENLIEHLETLKEHTDaL 51
                5678888899999999***************962 PP

>> PF12210.3  Hepatocyte growth factor-regulated tyrosine kinase substrate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   4.7     0.012        24      61      94 ..      33      70 ..       3      72 .. 0.70

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.012
   PF12210.3 61 kyeglqdkLaqikdaRaalde....lReehreklrraa 94
                 +e+l ++L  +k+   al++    + e h+ekl+++a
  MMETSP1325-20131115|9268_1 33 IHENLIEHLETLKEHTDALNHghghAEESHAEKLKKQA 70
                358999*************8533337899******987 PP

>> PF00831.18  Ribosomal L29 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.0    0.0003      0.59       9      31 ..       2      24 ..       1      29 [. 0.87
   2 ?   -0.4   0.3      0.42   8.3e+02      12      21 ..      37      46 ..      31      69 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0003
                HHHHHHHHHCHHHHHHHHHHHHH CS
  PF00831.18  9 deeLkeklkelkkeLfnLRfqka 31
                dee+ e+ +elk++L++ R  +a
  MMETSP1325-20131115|9268_1  2 DEEISEEHEELKRQLLDERERRA 24
                79**************9996666 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.42
                HHHHHHCHHH CS
  PF00831.18 12 Lkeklkelkk 21
                L e l+ lk+
  MMETSP1325-20131115|9268_1 37 LIEHLETLKE 46
                4555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1017  (0.0743856); expected 273.4 (0.02)
Passed bias filter:                      703  (0.051419); expected 273.4 (0.02)
Passed Vit filter:                        95  (0.00694851); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.46s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 306.90
//
Query:       MMETSP1325-20131115|9269_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-07   28.8   0.0    6.7e-07   28.5   0.0    1.1  1  PF03416.14 Peptidase family C54


Domain annotation for each model (and alignments):
>> PF03416.14  Peptidase family C54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   4.9e-11   6.7e-07     245     277 ..       6      38 ..       3      39 .. 0.91

  Alignments for each domain:
  == domain 1    score: 28.5 bits;  conditional E-value: 4.9e-11
  PF03416.14 245 vlkkleleklDPslaigflirdeddfedlkeel 277
                 +++ +++e+lDPsla++flird+ddf+d+ +++
  MMETSP1325-20131115|9269_1   6 SPTCMHVERLDPSLAVAFLIRDRDDFNDWAARV 38 
                 5678*************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 400.93
//
Query:       MMETSP1325-20131115|9267_1  [L=271]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-30  104.6   0.0    5.5e-30  104.1   0.0    1.1  1  PF05057.9  Putative serine esterase (DUF676)
     0.0005   19.6   0.0    0.00069   19.1   0.0    1.3  1  PF07819.8  PGAP1-like protein
    0.00097   18.0   0.0     0.0047   15.8   0.0    1.9  2  PF02450.10 Lecithin:cholesterol acyltransferase
  ------ inclusion threshold ------
      0.011   15.4   0.0      0.014   15.0   0.0    1.3  1  PF12695.2  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF05057.9  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   0.0   1.6e-33   5.5e-30      14     213 ..       2     181 ..       1     187 [. 0.92

  Alignments for each domain:
  == domain 1    score: 104.1 bits;  conditional E-value: 1.6e-33
   PF05057.9  14 lqgnsaDlelikeqlekikkelpeekieflmsennesktfkgidvlgerlaeevlevvkkkkdk......nkkiSfvghSlGgliaraaiaklkesemkeeaikglepvtfitlasPhLGvlysskslinlglwlleklkkslsmeqlgltGrdLflkddkdeknsllykllkdekdlkliealklFkrrvlyanvvndrivplas 213
                 ++g+s Dl+li+ ++ +  +     + ++++s+ ne ++++ i ++g+rla e++++v++k  +       +++SfvghS+G +++raa++ +  ++ +       +++ fi+l+sPhLG  y  ++ +  g+w l++l+k++++  l +        d +  + ++++kl+ d         l++Fk++vl++   +d++vpl+s
  MMETSP1325-20131115|9267_1   2 FHGSSYDLRLIRSYILLLFP-----NAMVMASQVNEDNSEASIMTMGNRLAAEIRNFVNHKCPElsnparANRLSFVGHSVGSVVVRAALTSPLLQPFQ------SKMYCFISLSSPHLGNTYIPSAIVSAGIWALKRLRKAQVLDELQML-------DASSPEDTVMFKLSLDRG-------LSYFKHVVLVSGH-QDQYVPLHS 181
                 79***************444.....5678899****************************998889999978*******************88877765......39999**************************************999.......*************77776.......999********66.*******99 PP

>> PF07819.8  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0     2e-07   0.00069      79     127 ..      62     112 ..      23     193 .. 0.71

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 2e-07
   PF07819.8  79 ssekeptsviliGHSmGGlVArsaltlpnyik..dsvntivtlasPhalpp 127
                 s++ + +++  +GHS+G +V r+alt p  ++  ++    ++l+sPh +  
  MMETSP1325-20131115|9267_1  62 SNPARANRLSFVGHSVGSVVVRAALTSPLLQPfqSKMYCFISLSSPHLGNT 112
                 45568889999*****************9988779999*********9876 PP

>> PF02450.10  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.4e-06    0.0047     111     172 ..      60     120 ..      52     155 .. 0.87
   2 ?   -0.3   0.0       0.1   3.6e+02     153     198 ..     200     246 ..     198     262 .. 0.63

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.4e-06
  PF02450.10 111 eealklsgkkvvLiaHSmGnllvlyfLkwveaeiWvdqhikafislgapllGsvkavkalls 172
                 e ++ +++++   ++HS G+ +v+  L +  ++   + +   fisl+ p lG   +  a++s
  MMETSP1325-20131115|9267_1  60 ELSNPARANRLSFVGHSVGSVVVRAALTSPLLQP-FQSKMYCFISLSSPHLGNTYIPSAIVS 120
                 566777899999******************9997.*****************9888777776 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.1
  PF02450.10 153 fislgapllGsvkavkallsGenkgtpilsslslkslekfp.akerl 198
                  i+++a l+Gs+ + k+l     +    +   ++ + + ++ ++ r+
  MMETSP1325-20131115|9267_1 200 VIAMAANLMGSLDPSKVLRINTDHFFEHITMDTMIGVQPMFpSSTRM 246
                 5999*******999999876554333333334443433333355554 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   4.1e-06     0.014      55     120 ..      64     182 ..      13     227 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4.1e-06
   PF12695.2  55 l.dleriilvGhSlGGgvalelag........................rddrvkglvllapfpdgedlakltl..............................pvllihGtrDgvvppeea 120
                 + +++r+ +vGhS G+ v+ ++                              + ++++ a++ + ++l+k ++                               v l+ G +D++vp +++
  MMETSP1325-20131115|9267_1  64 PaRANRLSFVGHSVGSVVVRAALTspllqpfqskmycfislssphlgnT--YIPSAIVSAGIWALKRLRKAQVldelqmldasspedtvmfklsldrglsyfkHVVLVSGHQDQYVPLHSS 182
                 157899**********999998889***999999999999998888551..4444444444333333333333444444666666666678888899999999*************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.64
# Mc/sec: 1014.71
//
Query:       MMETSP1325-20131115|9270_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 369.04
//
Query:       MMETSP1325-20131115|9271_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00081   18.8   0.0       0.08   12.4   0.0    2.6  3  PF12799.2  Leucine Rich repeats (2 copies)
    0.00082   18.9   0.0       0.29   11.2   0.0    3.1  3  PF00560.28 Leucine Rich Repeat
     0.0076   16.0   0.0       0.11   12.5   0.0    2.4  2  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
      0.052   13.6   0.4        1.1    9.5   0.0    3.0  4  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00012      0.41      15      37 ..      33      55 ..      23      61 .. 0.82
   2 !   12.4   0.0   2.3e-05      0.08       1      27 [.      42      69 ..      42      69 .. 0.94
   3 ?    0.6   0.0      0.12   4.1e+02       9      23 ..      79      94 ..      78      97 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00012
   PF12799.2 15 dlppelanLpnLktLnLsnNpis 37
                 +p e++ L+n ++L+L +N ++
  MMETSP1325-20131115|9271_1 33 TIPTEFGLLTNVTELDLGRNDFT 55
                58888999************876 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 2.3e-05
   PF12799.2  1 tnLevLdLsnNnIkd.lppelanLpnLk 27
                tn ++LdL +N  +  lp e++++++L+
  MMETSP1325-20131115|9271_1 42 TNVTELDLGRNDFTGpLPSEIGRMTKLT 69
                79************77**********96 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.12
   PF12799.2  9 snNnIkd.lppelanL 23
                s+N+++  +p el++L
  MMETSP1325-20131115|9271_1 79 SSNKLTGpIPTELGQL 94
                6788885588888888 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.46   1.6e+03      11      20 ..      29      39 ..      21      41 .. 0.69
   2 !   11.2   0.0   8.5e-05      0.29       1      20 [.      43      63 ..      43      65 .. 0.88
   3 ?    3.8   0.0     0.022        76       7      22 .]      78      94 ..      77      94 .. 0.86

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.46
                BCB.CHHHHHH CS
  PF00560.28 11 nlt.slppsls 20
                 lt ++p +++
  MMETSP1325-20131115|9271_1 29 GLTgTIPTEFG 39
                78888999886 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 8.5e-05
                TESEEEETSSBCB.CHHHHHH CS
  PF00560.28  1 nLeeLdLsgNnlt.slppsls 20
                n +eLdL +N +t  lp++++
  MMETSP1325-20131115|9271_1 43 NVTELDLGRNDFTgPLPSEIG 63
                689**********99**9876 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.022
                ETSSBCB.CHHHHHHHH CS
  PF00560.28  7 LsgNnlt.slppslsnL 22
                +s+N+lt  +p +l++L
  MMETSP1325-20131115|9271_1 78 VSSNKLTgPIPTELGQL 94
                599****99**998776 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   3.2e-05      0.11       1      23 [.      41      63 ..      41      64 .. 0.89
   2 ?    0.7   0.0      0.21   7.3e+02       9      23 ..      78      92 ..      77      93 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.2e-05
   PF13516.1  1 lknLtsLdLsnNqigdeGlsaLa 23
                l+n t+LdL++N++++   s ++
  MMETSP1325-20131115|9271_1 41 LTNVTELDLGRNDFTGPLPSEIG 63
                689************99888876 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.21
   PF13516.1  9 LsnNqigdeGlsaLa 23
                +s+N++++     L+
  MMETSP1325-20131115|9271_1 78 VSSNKLTGPIPTELG 92
                599***998776665 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0         4   1.4e+04      12      16 ..       4       9 ..       2      11 .. 0.55
   2 ?   -2.4   0.0       3.1   1.1e+04       9      14 ..      24      31 ..      22      35 .. 0.57
   3 ?    9.5   0.0   0.00033       1.1       1      15 [.      42      56 ..      42      59 .. 0.85
   4 ?    0.8   0.0      0.27   9.3e+02       8      15 ..      78      85 ..      63      94 .. 0.77

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 4
   PF13504.1 12 r.LtsL 16
                + L++L
  MMETSP1325-20131115|9271_1  4 SyLNDL 9 
                446655 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 3.1
   PF13504.1  9 sgnr..Lt 14
                 +n+  Lt
  MMETSP1325-20131115|9271_1 24 DYNQqgLT 31
                56765677 PP

  == domain 3    score: 9.5 bits;  conditional E-value: 0.00033
   PF13504.1  1 pnLkeLdLsgnrLts 15
                +n +eLdL +n++t 
  MMETSP1325-20131115|9271_1 42 TNVTELDLGRNDFTG 56
                699*********996 PP

  == domain 4    score: 0.8 bits;  conditional E-value: 0.27
   PF13504.1  8 LsgnrLts 15
                +s+n+Lt 
  MMETSP1325-20131115|9271_1 78 VSSNKLTG 85
                58899884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|9272_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-09   34.8   0.8    5.8e-09   34.8   0.6    1.0  1  PF00909.16 Ammonium Transporter Family


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.6   4.2e-13   5.8e-09     189     228 ..      11      52 ..       4      54 .] 0.79

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 4.2e-13
                 BHHHHH---HHHH--------------SHHHHH...HHHHHH CS
  PF00909.16 189 nlpfavlGtllLwfgWfgFNagsaltankrara..raavtTl 228
                   +f +lGtl+Lw+gW+gFN+ s+l + +      +++vtT+
  MMETSP1325-20131115|9272_1  11 GPIFCTLGTLILWMGWYGFNGVSTLYIVNYGLVaaKTMVTTT 52 
                 57899****************999988765433345777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 244.16
//
Query:       MMETSP1325-20131115|9273_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|9274_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.6e-12   44.8   0.0    1.1e-11   44.4   0.0    1.1  1  PF11838.3 Domain of unknown function (DUF3358)


Domain annotation for each model (and alignments):
>> PF11838.3  Domain of unknown function (DUF3358)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.0   8.1e-16   1.1e-11       1      53 [.     124     176 ..     124     181 .. 0.97

  Alignments for each domain:
  == domain 1    score: 44.4 bits;  conditional E-value: 8.1e-16
   PF11838.3   1 lvllNdddlgyyrvsYdpeslatllenlaslkLdpldRallwadlwdlvrdge 53 
                 +++lN+++  ++rv+Yd+esla l++++++ ++ p+dRa+l++d+++l+++g+
  MMETSP1325-20131115|9274_1 124 WIKLNAGQHVPCRVAYDAESLAGLSRAVETMAIGPEDRAGLINDAFALAKAGH 176
                 99*************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 948.12
//
Query:       MMETSP1325-20131115|9276_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 640.66
//
Query:       MMETSP1325-20131115|9277_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|9278_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 709.32
//
Query:       MMETSP1325-20131115|9279_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|9281_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 274.58
//
Query:       MMETSP1325-20131115|9280_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00088   17.5   2.9    0.00099   17.3   2.0    1.0  1  PF05911.6 Plant protein of unknown function (DUF869)
  ------ inclusion threshold ------
      0.055   12.3   0.2      0.075   11.8   0.2    1.2  1  PF10236.4 Mitochondrial ribosomal death-associated protein 3


Domain annotation for each model (and alignments):
>> PF05911.6  Plant protein of unknown function (DUF869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   2.0   1.4e-07   0.00099     458     549 ..       4      96 ..       1     101 [. 0.91

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.4e-07
   PF05911.6 458 eiledieaeldsverskkkskeqeekv.aenaslveevsaveerseelegavsriselvsslekevkacqdllsgkadlekkveelslvlekv 549
                 ++l+ +e+++++ve+++k+++  +e v +  + +  +v+a+ +++e+  + vs+ ++ +s++ +e+k +qd++ +k+dl+k++ +l+ +l+ +
  MMETSP1325-20131115|9280_1   4 AKLDSVEKAEADVEADAKEEARLVEEVrVAAKATAAKVEAETGIDEKAAATVSEGKDPCSEVLRELKLVQDMVLEKHDLKKSNMQLKKLLKRY 96 
                 7899**********999999999997778888999999*********************************************9999888765 PP

>> PF10236.4  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   1.1e-05     0.075      98     130 ..      63      95 ..      47      98 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.1e-05
   PF10236.4  98 eevLkklklskdykllkresvkagstLldLlkk 130
                 +evL++lkl++d++l+k++++k ++ L +Llk+
  MMETSP1325-20131115|9280_1  63 SEVLRELKLVQDMVLEKHDLKKSNMQLKKLLKR 95 
                 79****************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1187  (0.0868198); expected 273.4 (0.02)
Passed bias filter:                      758  (0.0554418); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.45s 00:00:00.89 Elapsed: 00:00:00.59
# Mc/sec: 418.35
//
Query:       MMETSP1325-20131115|9282_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      362  (0.0264775); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 904.29
//
Query:       MMETSP1325-20131115|9283_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-05   24.2  12.5    2.5e-05   24.2   8.7    3.2  4  PF07974.8  EGF-like domain
    0.00073   19.3   7.5    0.00073   19.3   5.2    1.8  2  PF00053.19 Laminin EGF-like (Domains III and V)
     0.0096   15.7   8.7     0.0096   15.7   6.0    2.5  3  PF00008.22 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.84   3.8e+03      22      27 ..       1       6 [.       1       7 [. 0.78
   2 ?    2.4   0.0     0.036   1.6e+02      26      32 .]      19      25 ..      15      25 .. 0.86
   3 ?   -2.8   0.1       1.5   6.8e+03      22      26 ..      29      33 ..      29      33 .. 0.70
   4 !   24.2   8.7   5.5e-09   2.5e-05       1      32 []      64      92 ..      62      92 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.84
   PF07974.8 22 vCdsgy 27
                vCds +
  MMETSP1325-20131115|9283_1  1 VCDSAW 6 
                699988 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.036
   PF07974.8 26 gyqGktC 32
                 ++G++C
  MMETSP1325-20131115|9283_1 19 EWFGPDC 25
                5****** PP

  == domain 3    score: -2.8 bits;  conditional E-value: 1.5
   PF07974.8 22 vCdsg 26
                +C+sg
  MMETSP1325-20131115|9283_1 29 HCPSG 33
                68876 PP

  == domain 4    score: 24.2 bits;  conditional E-value: 5.5e-09
   PF07974.8  1 CsadgliCgghGtCvkqcgkCvCdsgyqGktC 32
                C     +C+++GtC+  +g+C C  gy+G++C
  MMETSP1325-20131115|9283_1 64 CHV---DCSNRGTCDYLTGTCTCFPGYHGANC 92
                552...4********77*************** PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         1   4.6e+03      29      32 ..      23      26 ..      18      35 .. 0.59
   2 !   19.3   5.2   1.6e-07   0.00073       2      32 ..      63      93 ..      63     101 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1
                --S- CS
  PF00053.19 29 rkCd 32
                ++C 
  MMETSP1325-20131115|9283_1 23 PDCS 26
                5553 PP

  == domain 2    score: 19.3 bits;  conditional E-value: 1.6e-07
                -STT-B-CC--B-S----BSBSTTEE---S- CS
  PF00053.19  2 eCnphgsssssCdsstgqClCkenveGrkCd 32
                +C+   s++++Cd  tg+C C ++++G +C 
  MMETSP1325-20131115|9283_1 63 KCHVDCSNRGTCDYLTGTCTCFPGYHGANCG 93
                5888888889********************7 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.16   7.5e+02      23      31 ..      29      37 ..      29      38 .. 0.76
   2 ?   -3.6   0.0       2.3   1.1e+04       5       7 ..      45      47 ..      42      48 .. 0.60
   3 !   15.7   6.0   2.1e-06    0.0096       5      32 .]      67      91 ..      61      91 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.16
                E--TTCTTT CS
  PF00008.22 23 eCpeGytGk 31
                +Cp+G + +
  MMETSP1325-20131115|9283_1 29 HCPSGDDPE 37
                6****8765 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 2.3
                TCS CS
  PF00008.22  5 pCs 7 
                +Cs
  MMETSP1325-20131115|9283_1 45 NCS 47
                786 PP

  == domain 3    score: 15.7 bits;  conditional E-value: 2.1e-06
                TCSS--EEEEECCTEEEEE--TTCTTTE CS
  PF00008.22  5 pCsngGtCvdtpgggytCeCpeGytGkr 32
                 Csn+GtC ++     tC+C +Gy+G +
  MMETSP1325-20131115|9283_1 67 DCSNRGTCDYLT---GTCTCFPGYHGAN 91
                7**********6...***********75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 546.99
//
Query:       MMETSP1325-20131115|9285_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.08   13.3   0.6      0.098   13.0   0.5    1.1  1  PF12752.2 SUZ domain
       0.32   11.0   3.7       0.48   10.5   2.6    1.3  1  PF10587.4 Eukaryotic elongation factor 1 beta central acidic region
       0.46    9.9   4.5       0.66    9.4   3.1    1.3  1  PF09851.4 Short C-terminal domain


Domain annotation for each model (and alignments):
>> PF12752.2  SUZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.5   2.2e-05     0.098      27      49 ..       6      28 ..       2      28 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.2e-05
   PF12752.2 27 agakgakdrkaksleEReaeYqe 49
                a +kg++  ++k+leE ++eY++
  MMETSP1325-20131115|9285_1  6 AHNKGHDHLATKTLEEEQEEYEK 28
                568899999************86 PP

>> PF10587.4  Eukaryotic elongation factor 1 beta central acidic region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.6    0.0001      0.48       7      22 ..      20      35 ..      20      36 .] 0.93

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.0001
   PF10587.4  7 EeEDeEaerireeRLa 22
                EeE eE+e+ ++e L+
  MMETSP1325-20131115|9285_1 20 EEEQEEYEKKMQELLK 35
                78***********998 PP

>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.1   0.00014      0.66      19      31 .]      23      35 ..      22      35 .. 0.94

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00014
   PF09851.4 19 eEEFeakKkkLLg 31
                +EE+e+k ++LL+
  MMETSP1325-20131115|9285_1 23 QEEYEKKMQELLK 35
                8**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1194  (0.0873318); expected 273.4 (0.02)
Passed bias filter:                      872  (0.06378); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.44s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 165.90
//
Query:       MMETSP1325-20131115|9287_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|9290_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|9292_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|9289_1  [L=431]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-23   83.5   1.2    3.5e-23   82.3   0.9    1.6  1  PF05199.8  GMC oxidoreductase
    1.3e-13   50.6   0.6    3.3e-13   49.3   0.1    1.8  2  PF00732.14 GMC oxidoreductase


Domain annotation for each model (and alignments):
>> PF05199.8  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.3   0.9   5.2e-27   3.5e-23      12     141 ..     183     316 ..     174     320 .. 0.80

  Alignments for each domain:
  == domain 1    score: 82.3 bits;  conditional E-value: 5.2e-27
   PF05199.8  12 sdpsgapsidvnylsdprDvaalvealkklrkileaaalskll..laeltpgpekeekdaaeasdealleavrraav..ttwHplGtcrMGkdekdgVVDsdlrvygvknLrVvDaSvfPsapggnptltvyal 141
                 +dp+++  ++++y  +++D + +++++ k+ +il+aa ++++     e+++  +++ k  ++  d      ++ ++v   ++H++G+crMG +++++VVD+d+++++++nL+ +DaS++P+a+++np+++++ +
  MMETSP1325-20131115|9289_1 183 DDPTNPMGMKIEYSVTEDDKESMIDGMDKCIRILAAAGANEIMtmHSEKRVHRTSDGKALDQYVDGVRASGIKTNSVgvFSAHQMGSCRMGYSPNTSVVDEDGEMWECDNLYLADASTLPTASAANPMVSTLSI 316
                 6899999999***************************666666774444444444444444444443445566655536789***********************************************99877 PP

>> PF00732.14  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.1   4.8e-17   3.3e-13     197     298 .]       3      94 ..       1      94 [. 0.89
   2 ?   -1.4   0.0      0.13   9.2e+02     155     184 ..     244     274 ..     205     304 .. 0.65

  Alignments for each domain:
  == domain 1    score: 49.3 bits;  conditional E-value: 4.8e-17
                 HHTTTTTT-TTEEEE---------E.......------EE---EE------.-EE-EEEEEEEE-----SHHHHHHH-----HHHHTT-----SS---.--------EE CS
  PF00732.14 197 awLrpalerpnleiltgakaekiil.......eegrkkravGVeasdkkgtvkrlvvaakevvvaaGalnsPqlLqrSGlGkaehLkevgvdvvvdlpgvGkNLqdHpv 298
                 ++L +a +  n+ ++ ++ ++++          +  +  a+GVea+ ++ +   +v a++ vvv++G+l++P lLqrSG+ +++h              +G+ L++Hpv
  MMETSP1325-20131115|9289_1   3 TFLTDAARTGNAAFIDNCAVKRVTRtaakggpASSATSVATGVEAEVNGHK--LRVSARRCVVVSCGSLQTPCLLQRSGF-RNPH--------------IGRHLHLHPV 94 
                 89*********************7799988874556888888888777666..9999***********************.****..............********97 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.13
                 HHHHHHHT------------...-----B---- CS
  PF00732.14 155 allkaaeelGlpvprdlngk...hqcGvcllgv 184
                   +++++  G++   ++ g    hq G+c +g 
  MMETSP1325-20131115|9289_1 244 QYVDGVRASGIK--TNSVGVfsaHQMGSCRMGY 274
                 556677777777..3333322558889888873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.39s 00:00:01.10 Elapsed: 00:00:00.49
# Mc/sec: 2107.82
//
Query:       MMETSP1325-20131115|9293_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.027   13.9   0.0      0.034   13.6   0.0    1.1  1  PF04403.8 Paraquat-inducible protein A


Domain annotation for each model (and alignments):
>> PF04403.8  Paraquat-inducible protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.5e-06     0.034      49      90 ..      45      86 ..      42      93 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.5e-06
   PF04403.8 49 gsllvAllvflasivvPllklllllllllslqrkrklpakkr 90
                + +l++ +++++s+vvP++ +++  + ++   r   +++++ 
  MMETSP1325-20131115|9293_1 45 NTWLLGKVLLFLSVVVPAVAIVSSFFAVFYPDRADYWDHRHS 86
                689************************999998888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 386.51
//
Query:       MMETSP1325-20131115|9291_1  [L=323]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-10   39.8   0.0    6.8e-10   39.2   0.0    1.3  1  PF00581.15 Rhodanese-like domain


Domain annotation for each model (and alignments):
>> PF00581.15  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.0   4.9e-14   6.8e-10      13     111 ..      40     126 ..      34     128 .. 0.76

  Alignments for each domain:
  == domain 1    score: 39.2 bits;  conditional E-value: 4.9e-14
  PF00581.15  13 kvvllDvRspeeyekghIpgAvnvpldslypkrdlpfkdklaeeleesgkkldkkktvvvycssgnrsggaaalllalilkelgyknvyvLdGGfeawk 111
                  ++llDvR + e++ ghI  A+++p           +  +     e++  k  + k +++y+   ++     a+  a+ l+e g++nv+vL  G+ +++
  MMETSP1325-20131115|9291_1  40 PYLLLDVRAEREFASGHILQARSFPS---------VMLRQDRMITEMYNFKNREGKLIILYD---ENELVPEAAQCAARLSERGFENVFVLTKGIAGFA 126
                 589***********************.........33344444455666666888889***9...333333333335669999************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1407.32
//
Query:       MMETSP1325-20131115|9296_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 640.56
//
Query:       MMETSP1325-20131115|9297_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   13.9   0.0      0.023   13.8   0.0    1.1  1  PF00722.16 Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> PF00722.16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.7e-06     0.023      37      67 ..      11      42 ..       3      56 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.7e-06
                EEEEESSEEEE-EEEEEEE.-------EEEEE CS
  PF00722.16 37 gglkskksylyGkvearik.aakgaGvvtafw 67
                +++++++++ yG++ a++k a++ + +v+af 
  MMETSP1325-20131115|9297_1 11 PSIRTNTTIFYGRIAAKLKeANRVRIIVPAFL 42
                6799***************999********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.45
# Mc/sec: 351.47
//
Query:       MMETSP1325-20131115|9298_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0088   15.4   0.0     0.0097   15.2   0.0    1.0  1  PF13994.1 PgaD-like protein


Domain annotation for each model (and alignments):
>> PF13994.1  PgaD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   7.1e-07    0.0097      56     103 ..      11      57 ..       2      62 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 7.1e-07
   PF13994.1  56 dssesletleiylliivlnavvLilWakynrlRfrgkrrrrapkalsd 103
                 d   s+++l ++l++i l+ v L+ W+ ++ +R+   +++r++k l++
  MMETSP1325-20131115|9298_1  11 DLNYSPTVLAVGLILINLFIVPLMTWMGVQDMRREEANEKRTRK-LQT 57 
                 55567889999************************999999877.554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       499  (0.036498); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 278.15
//
Query:       MMETSP1325-20131115|9299_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 302.94
//
Query:       MMETSP1325-20131115|9300_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|9302_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.5   0.2      0.019   15.0   0.1    1.3  1  PF04773.8 FecR protein
        0.1   12.2   0.0       0.17   11.5   0.0    1.3  1  PF06169.7 Protein of unknown function (DUF982)


Domain annotation for each model (and alignments):
>> PF04773.8  FecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.1   2.8e-06     0.019      37      78 ..      58      99 ..      39     112 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.8e-06
   PF04773.8 37 rrerevkllkGevlvdvaksakrpfevetpsatigvrGTeFs 78
                   ++++  k ++ + v+++++  f+++tp+  +++rG +F+
  MMETSP1325-20131115|9302_1 58 GTATQLEKAKKKIQTAVNRAGAAGFVIHTPGHFVAIRGADFK 99
                445567777888999999988877*****************3 PP

>> PF06169.7  Protein of unknown function (DUF982)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.5e-05      0.17      28      72 ..      34      79 ..      28      81 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.5e-05
                HH--S----HHHHHHHHHHHHHH----.---HHHHHHHHHHHHHT- CS
   PF06169.7 28 leeWPvrrgpayeaAlkaCraAldgei.ppeeAReaFiaAakeagi 72
                l + P+++g+++ +A+    +A +g + ++e+A + +  A++ ag 
  MMETSP1325-20131115|9302_1 34 LVQFPQKDGEQHAQAVAELVDAPNGTAtQLEKAKKKIQTAVNRAGA 79
                4788*********************8626899*9999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       588  (0.0430076); expected 273.4 (0.02)
Passed bias filter:                      518  (0.0378877); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|9303_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00051   20.2   0.1       0.14   12.3   0.0    2.1  2  PF12796.2  Ankyrin repeats (3 copies)
  ------ inclusion threshold ------
      0.052   13.2   1.0        3.6    7.4   0.0    3.1  4  PF00023.25 Ankyrin repeat
      0.099   13.0   0.0       0.73   10.3   0.0    2.2  2  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.1    0.0013       5.9      46      73 ..       2      38 ..       1      53 [. 0.72
   2 !   12.3   0.0   3.1e-05      0.14      17      66 ..      44     110 .]      31     110 .] 0.66

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0013
   PF12796.2 46 leagadvnakdkegntpLhlA.........vrnghle 73
                l++gadv ak+ e++t+L lA         v  gh+ 
  MMETSP1325-20131115|9303_1  2 LANGADVMAKNWEQKTALDLAkqgnsfsgrVTEGHKA 38
                679****************994444444444455555 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 3.1e-05
   PF12796.2  17 lekgadvdlget..............pLhlAaeagnleivklLleaga.dvnakd....kegntpLhlA 66 
                  e+  + +  ++              +L   a  g ++ + +Lle+g  dv++ +     +g+t+Lh+A
  MMETSP1325-20131115|9303_1  44 EEAMTKAH--DEacaiatepapavgdALRFYAGVGEVARLTALLERGIvDVDDPTlqrpLQGWTALHWA 110
                 44444444..33222222344444447777789999999999*****548888778999*********9 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.021        96      22      32 ..       2      12 ..       2      13 .. 0.87
   2 ?   -1.1   0.0      0.38   1.7e+03       4      13 ..      17      26 ..      15      43 .. 0.72
   3 ?   -3.3   0.0       1.9   8.8e+03      19      25 ..      82      88 ..      81      89 .. 0.71
   4 ?    7.4   0.0   0.00079       3.6       2       9 ..     103     110 .]     102     110 .] 0.93

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.021
                HHTTSSTTHBH CS
  PF00023.25 22 lsqGAdlnaqd 32
                l +GAd+ a++
  MMETSP1325-20131115|9303_1  2 LANGADVMAKN 12
                679******98 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.38
                BHHHHHHHTT CS
  PF00023.25  4 TPLHlAalrg 13
                T+L lA + +
  MMETSP1325-20131115|9303_1 17 TALDLAKQGN 26
                8888875544 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 1.9
                HHHHHTT CS
  PF00023.25 19 klLlsqG 25
                + Ll++G
  MMETSP1325-20131115|9303_1 82 TALLERG 88
                4688887 PP

  == domain 4    score: 7.4 bits;  conditional E-value: 0.00079
                 SCBHHHHH CS
  PF00023.25   2 GfTPLHlA 9  
                 G+T+LH+A
  MMETSP1325-20131115|9303_1 103 GWTALHWA 110
                 9******9 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       0.3   1.4e+03      22      41 ..       3      22 ..       2      30 .. 0.73
   2 ?   10.3   0.0   0.00016      0.73      18      41 ..      82     110 .]      70     110 .] 0.79

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.3
   PF13637.1 22 ekgidinrtdesGntaLhiA 41
                ++g+d+ +++ ++ taL++A
  MMETSP1325-20131115|9303_1  3 ANGADVMAKNWEQKTALDLA 22
                56777777776788999988 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00016
   PF13637.1  18 klLlekg.id...inrt.desGntaLhiA 41 
                   Lle+g +d   +  + + +G+taLh A
  MMETSP1325-20131115|9303_1  82 TALLERGiVDvddPTLQrPLQGWTALHWA 110
                 5688888666556666699********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 585.78
//
Query:       MMETSP1325-20131115|9304_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.8e-17   60.8   0.0    9.6e-17   60.7   0.0    1.0  1  PF00202.16 Aminotransferase class-III


Domain annotation for each model (and alignments):
>> PF00202.16  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.0     7e-21   9.6e-17     274     338 ..       2      67 ..       1      68 [. 0.97

  Alignments for each domain:
  == domain 1    score: 60.7 bits;  conditional E-value: 7e-21
                 -SSTT-HHHHHHHHHHHHHHHHTTHHHHHHH---TTTHHHHHHHCC-.TTEEEEE-----EEEEEE CS
  PF00202.16 274 ttfggnplacavalavlevieeeellenaqekgerlkkgLeeLkeky.dvikevRgkGlliaielv 338
                 ttfggnplaca++l+v ++i ee+llen+++ ge+l++gLee+++k+   +k+vRg Gl+ + e++
  MMETSP1325-20131115|9304_1   2 TTFGGNPLACAAGLQVAKAIDEENLLENVAARGEQLRTGLEEIQKKHpTWVKDVRGWGLITGLEIS 67 
                 7**********************************************999*************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|9301_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       629  (0.0460064); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.38s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 1475.40
//
Query:       MMETSP1325-20131115|9305_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 185.84
//
Query:       MMETSP1325-20131115|9307_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|9311_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-27   96.9   3.4    1.5e-27   96.8   2.3    1.0  1  PF00112.18 Papain family cysteine protease


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.8   2.3   1.1e-31   1.5e-27       1      87 [.      40     128 ..      40     130 .] 0.96

  Alignments for each domain:
  == domain 1    score: 96.8 bits;  conditional E-value: 1.1e-31
                 -TSB--CCC.TT.G.GG---B------HHHHHHHHHHHHHHHHHHS..S---B-HHHHHHH-TTTS-TT----HHHHHHHHHHC---BBT CS
  PF00112.18   1 lpesvDwre.kkga.vtpvkdqgqCGsCWafsavgalegrlaiktk.kklvslSeqelvdCskeenegCnGGlmenafeyikknggivte 87 
                 lp+++Dwre +++a +++++dq++CGsCWaf++v+a+ +r++i+++  +  +lS+q++ +C++  + gC+GG++ +a+ y+++ +g+vt+
  MMETSP1325-20131115|9311_1  40 LPTDWDWREeSDCAsLKEIRDQSNCGSCWAFGSVEAMTDRICIQSNgAQTPHLSAQDVTSCCHLGDMGCHGGVPPTAYTYWTS-TGVVTG 128
                 699******878999*******************************9999*************9999***************9.999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|9309_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-21   74.2   0.0    9.1e-21   74.0   0.0    1.1  1  PF00069.20 Protein kinase domain
     0.0035   16.3   0.0     0.0058   15.6   0.0    1.4  2  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   0.0   1.3e-24   9.1e-21     135     260 .]       3     153 ..       1     153 [. 0.85

  Alignments for each domain:
  == domain 1    score: 74.0 bits;  conditional E-value: 1.3e-24
                 --EEE------EEE..........CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST....HHHHHHHHHCCCHHTTS--GGGGCSHHH......HHHHHHHHHHT-SSGGGS--.....HHHHHTSGGH CS
  PF00069.20 135 gelkiaDFGlakkl..........eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge....seedqleliekilkkkleedepksssks......eelkdlikkllekdpakRlt.....aeeilkhpwl 260
                 g++ ++D+G+akkl          e ++ +++tl+gt eY+APE   ++ ++t++vD W+lG+i++e++ gk+pf +     + ++   +i+k++ k++e+d + +++          +++l+++ll+  p++Rl      a+ i +hp++
  MMETSP1325-20131115|9309_1   3 GYIILIDLGFAKKLpytevdqdgfEIHHDMTYTLCGTFEYLAPEFFYDGHGHTHAVDYWALGCIVHEMVMGKTPFVDFpgeqDLRKLFLRICKTQYKPVEFDPSFDEHAAisgeepGACRQLCSELLKSHPTERLGnlaggAKGITEHPYF 153
                 67889*******************99************************************************98654222333444456666666666666655444499999999*****************9999999999999997 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   8.5e-07    0.0058     168     213 ..      39      84 ..       3     106 .. 0.80
   2 ?   -4.2   0.0      0.95   6.5e+03     164     178 ..     163     177 ..     161     186 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 8.5e-07
                 CGGGS-HHHHHHSE.EEHHHHHHH---HHHHHHTTT-GTTTTSHHHH CS
  PF07714.12 168 pvkWmapEslkekk.ftsksDvWsfGvllwEiftlgespypglsnee 213
                  ++++apE + +++  t++ D W+ G++++E++  g++p+ ++  e+
  MMETSP1325-20131115|9309_1  39 TFEYLAPEFFYDGHgHTHAVDYWALGCIVHEMVM-GKTPFVDFPGEQ 84 
                 57899****9999879999*************98.99**99986555 PP

  == domain 2    score: -4.2 bits;  conditional E-value: 0.95
                 T-EECGGGS-HHHHH CS
  PF07714.12 164 eaklpvkWmapEslk 178
                 e+++p  W++p  l+
  MMETSP1325-20131115|9309_1 163 EKEMPAPWLPPTELF 177
                 567899999885554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.45s 00:00:00.89 Elapsed: 00:00:00.55
# Mc/sec: 1032.61
//
Query:       MMETSP1325-20131115|9314_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.24u 0.44s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|9313_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 984.59
//
Query:       MMETSP1325-20131115|9316_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 498.07
//
Query:       MMETSP1325-20131115|9317_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 281.11
//
Query:       MMETSP1325-20131115|9318_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   12.4   0.1      0.083   11.9   0.0    1.2  1  PF11468.3 Aromatic prenyltransferase Orf2


Domain annotation for each model (and alignments):
>> PF11468.3  Aromatic prenyltransferase Orf2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   6.1e-06     0.083     220     268 ..      64     113 ..      62     131 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.1e-06
                 EEEECC.GGGTTS--H----HHHHHHHHS--SSSS--.EEE-EEEETTEE CS
   PF11468.3 220 faalkererdpaelparleeriekFlkaaPskdeeek.lvvaasfgeeee 268
                 +a l++++ dp ++pa  ++ iekF ++ P+ +++ +  v+a+ +  e++
  MMETSP1325-20131115|9318_1  64 YARLEVKKLDPSDVPAARKAFIEKFDENFPHTVKNLClKVTAWMVEVENR 113
                 777888899**************************998999998766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.39s 00:00:00.86 Elapsed: 00:00:00.67
# Mc/sec: 665.26
//
Query:       MMETSP1325-20131115|9320_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-23   82.7   0.1    1.6e-23   82.5   0.1    1.1  1  PF00179.21 Ubiquitin-conjugating enzyme
    0.00072   19.2   0.0    0.00084   19.0   0.0    1.1  1  PF14461.1  Prokaryotic E2 family B
  ------ inclusion threshold ------
       0.21   10.8   1.0         19    4.6   0.1    2.4  2  PF08225.6  Pseudin antimicrobial peptide


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   0.1   3.4e-27   1.6e-23      35     104 ..      10      78 ..       2      79 .] 0.95

  Alignments for each domain:
  == domain 1    score: 82.5 bits;  conditional E-value: 3.4e-27
                 ---TTSTTGGB-EEEEEE--TTTTTS--EEEESS--SCTTB-----B-HGGGSTTT--TT--HHHHHHHH CS
  PF00179.21  35 kgpegtpYegglFklkikfpeeYPfkPPkvkfvtkifHPnvdetGeicldiLkeekWspaltlesvLlsi 104
                 +gpegtp++gg F+lk+ + +eYP  PPk  f+tki+HPnv + G+ic++ Lk++ W+ ++t++ +L  i
  MMETSP1325-20131115|9320_1  10 EGPEGTPFAGGKFNLKMVIGPEYPQAPPKGYFITKIYHPNVGPAGDICVNTLKKD-WKETTTMSYILAVI 78 
                 69***************************************************66.**********9876 PP

>> PF14461.1  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.8e-07   0.00084      35      93 ..      19      73 ..      17      79 .] 0.90

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 1.8e-07
   PF14461.1 35 ggtipirlvipdefplvlpkvfladklearllpHvese..gaLCllerpsanwdpndlasl 93
                gg +++  vi +e+p  +pk++ + k     ++H + +  g++C+++ +  +w +  ++s 
  MMETSP1325-20131115|9320_1 19 GGKFNLKMVIGPEYPQAPPKGYFITK-----IYHPNVGpaGDICVNTLK-KDWKETTTMSY 73
                789999********************.....******9***********.***99766665 PP

>> PF08225.6  Pseudin antimicrobial peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1    0.0041        19       2       7 ..       4       9 ..       3      10 .. 0.91
   2 ?    4.6   0.1    0.0041        19       2       7 ..      58      63 ..      57      64 .. 0.91

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0041
   PF08225.6 2 lNTLKK 7
               +NTLKK
  MMETSP1325-20131115|9320_1 4 VNTLKK 9
               6****9 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0041
   PF08225.6  2 lNTLKK 7 
                +NTLKK
  MMETSP1325-20131115|9320_1 58 VNTLKK 63
                6****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 371.20
//
Query:       MMETSP1325-20131115|9319_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-10   41.4   0.4    1.4e-10   41.0   0.3    1.1  1  PF00704.23 Glycosyl hydrolases family 18


Domain annotation for each model (and alignments):
>> PF00704.23  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.3     1e-14   1.4e-10     159     341 ..      16     211 ..       2     212 .. 0.77

  Alignments for each domain:
  == domain 1    score: 41.0 bits;  conditional E-value: 1e-14
                 ---EEEEEBSSH..HHHHCGHHHHHHCSSEEEEETTSCSETTSSBETTTS-SSSETCT...GCCSSHHHHHHHHHHGGGCGGGEE---B-SSSEEEBSCTTS----EBEE............-HHHHHSTBTTCHHHHHHHHHHHCCGGEEEEETTTTEEEEECHC.......HTEEEECHHHHHHHHHHHHHHHTT----EEBTGG CS
  PF00704.23 159 ylLtaavpaspd..klsgsdiaeiakylDfinlmtyDfhgawsnetghnaplydgskd...ekslnvdyavkyylkagvpakKlvlGvpfygrgwklvsgsgnglsapaa............adagvgtkeegvlsykeiksllkssgatvvyddtakapylynge.......gkqfvsyddprsikaKakyvkdkglgGvmiWeld 341
                  +  +avp spd   l+++d + +a    f+++m y            ++++++       ++   ++++++ y   g+pa KlvlG+ + g +w++++  g+++ +                + +++ +e+  +  + + +l   ++    +dd +k py    +       +   v+y++p+si +K++ +k+++ gGv  Wel+
  MMETSP1325-20131115|9319_1  16 SYVGVAVPWSPDgiDLRYYDWRGLAFGSTFFWVMGYS----------VPSQVFSRC-IaggNGVKQLQHGLEGYMAYGIPATKLVLGMSWGGASWECTNFVGDTGLDYCEppmetslegyrgVNCTDAVSEACGNLDNCWEKLTAPNTVYHGWDDYTKLPYFNYVTplngsdtKLYQVWYETPESIGHKVTLAKNMKVGGVGPWELG 211
                 5677889999997777777999998889999999772..........334444432.12443444678999****************************99988888776888998888765366666677777777777776667778888888899998877777888875334499**************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 1143.92
//
Query:       MMETSP1325-20131115|9321_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       466  (0.0340843); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 870.98
//
Query:       MMETSP1325-20131115|9322_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-34  116.9   0.0    8.5e-34  116.8   0.0    1.0  1  PF00562.23 RNA polymerase Rpb2, domain 6


Domain annotation for each model (and alignments):
>> PF00562.23  RNA polymerase Rpb2, domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.8   0.0   6.2e-38   8.5e-34       2     158 ..      12     173 .]      11     173 .] 0.87

  Alignments for each domain:
  == domain 1    score: 116.8 bits;  conditional E-value: 6.2e-38
                 -GGGS-SS-TTB-HHHHHHHHHHGGGB-----TTTTT---SSE...SS----SSB-S.TTTT--.........-TTS----EE-B--S------TTT---BBSHHHH-------EEEE.EEE.......----.------.-S--..-.....----CCCS-------SS--- CS
  PF00562.23   2 vvaslipfvehnqspriiiqsqmakqaigiyslnkykrsnqkt...cinqkplvktgdkvekgdiladgsatengelalGqnvlVafmsyeGynfEDaiiinerlverglftsihikeevea.......rdtk.lgkseeitrdipnv.....seealkkldedGiikvgaev 158
                 ++as ipf++hnqspr+++qs+m+kqa+giys n + r+++     +++qkpl +t+ +++            + +l++G n++Va+m y+Gyn+ED++i n+++ + glf+s  ++  ++a        dt+   +++e ++ + ++     ++ +++kld+dG++ +g++v
  MMETSP1325-20131115|9322_1  12 ICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFQVRMDTMAhvlHYPQKPLATTR-AMDHLH---------FRDLPSGFNAIVAIMIYSGYNQEDSLIQNQSAHDLGLFRSSYFRC-YNAkeeargfGDTPgMMAQSESFEVPTRDdctglKHGSYEKLDSDGLVAPGTRV 173
                 89***************************************99999***********.9***99.........*******************************************99.6664445555333332333444444444488999*****************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 846.06
//
Query:       MMETSP1325-20131115|9315_1  [L=961]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-06   27.0   0.0    7.1e-06   26.0   0.0    1.4  1  PF00169.24 PH domain
    6.5e-05   23.2   0.1    0.00014   22.1   0.0    1.5  1  PF13637.1  Ankyrin repeats (many copies)
     0.0046   17.1   0.0      0.011   15.9   0.0    1.6  1  PF12796.2  Ankyrin repeats (3 copies)
     0.0074   16.3   0.0       0.02   15.0   0.0    1.7  1  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   2.1e-09   7.1e-06       4     102 ..     807     917 ..     805     918 .. 0.92

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 2.1e-09
                 EEEEEEEE..TSSSCEEEEEEEEET....TEEEEESSSST....TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTT........CEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24   4 eGyllkks..ellktwkkryfvLts....nyLlyfksskk....ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdv........esyllsaeseeerkrWvqalknl 102
                  G+l+k++     k wk+ryfvLt       ++y+k++      k +++p g+i l   +   + s+      + ++ f+ t              y l ae++eer  Wv++ + +
  MMETSP1325-20131115|9315_1 807 RGWLSKQGhsTFGKGWKRRYFVLTVfadsPTIYYYKKEVVgdvaKCREKPVGCIKLPMTDHALVNSN------DATFEFTATSAAAsssrdkggVVYPLRAETLEERAFWVDSCNAA 917
                 6***********************999989999999998899*****************99999998......6999999999888999999*9*****************988765 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   4.1e-08   0.00014       4      45 ..      39      80 ..      38      88 .. 0.89

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 4.1e-08
   PF13637.1  4 aLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrg 45
                aL +a+    ++lv +Ll+ g d+n+t++ G t+L++A +r+
  MMETSP1325-20131115|9315_1 39 ALVRAVVRDEVKLVTSLLDDGCDLNHTNAGGLTLLDLATERE 80
                7889999999****************************9887 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   3.2e-06     0.011      27      83 ..      37      93 ..      21      98 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 3.2e-06
   PF12796.2 27 etpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83
                +++L  A+ ++ ++ v  Ll+ g+d+n++++ g t L lA + +  ++  lL ++ga
  MMETSP1325-20131115|9315_1 37 KRALVRAVVRDEVKLVTSLLDDGCDLNHTNAGGLTLLDLATEREARKVRALLEQRGA 93
                559999***********************************9887776555555565 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.7e-06      0.02      19      56 .]      39      76 ..      23      76 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5.7e-06
   PF13857.1 19 pLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                +L  A+ +  + +v  Ll+ g+dln++++ glt ldlA
  MMETSP1325-20131115|9315_1 39 ALVRAVVRDEVKLVTSLLDDGCDLNHTNAGGLTLLDLA 76
                5667777777888999*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (961 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       640  (0.046811); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.36u 0.37s 00:00:01.73 Elapsed: 00:00:00.72
# Mc/sec: 3198.47
//
Query:       MMETSP1325-20131115|9323_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 423.19
//
Query:       MMETSP1325-20131115|9324_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|9326_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 254.61
//
Query:       MMETSP1325-20131115|9327_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.4   0.1        0.2   11.4   0.0    1.6  2  PF10922.3 Protein of unknown function (DUF2745)


Domain annotation for each model (and alignments):
>> PF10922.3  Protein of unknown function (DUF2745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.5e-05       0.2      20      49 ..      31      60 ..      21      81 .. 0.87
   2 ?   -2.7   0.0      0.38   5.2e+03      15      58 ..      94     110 ..      83     118 .. 0.50

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.5e-05
   PF10922.3 20 selDlavileefsdevsrkeCmkLrvedrs 49
                 e+ + v ++++s+++  k+  +L++e r+
  MMETSP1325-20131115|9327_1 31 DEHRIMVTCKDWSQKNRIKQSEWLKIEARQ 60
                468899*********************997 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.38
   PF10922.3  15 avdrlselDlavileefsdevsrkeCmkLrvedrsGkliasktf 58 
                 ++  l +l  +v                             +tf
  MMETSP1325-20131115|9327_1  94 SMRSLPQLGSTVG---------------------------NSTF 110
                 3333333333333...........................3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       593  (0.0433733); expected 273.4 (0.02)
Passed bias filter:                      466  (0.0340843); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 635.77
//
Query:       MMETSP1325-20131115|9328_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-09   34.1   1.0    1.1e-08   33.9   0.7    1.1  1  PF01490.13 Transmembrane amino acid transporter protein
  ------ inclusion threshold ------
      0.072   12.7   1.5       0.11   12.1   1.0    1.5  1  PF11045.3  Putative inner membrane protein of Enterobacteriaceae


Domain annotation for each model (and alignments):
>> PF01490.13  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.7   1.6e-12   1.1e-08     317     384 ..       7      75 ..       2     102 .. 0.75

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 1.6e-12
  PF01490.13 317 apkskllrlvirlllvvityliAlsvpslakvlslvGatsstslsfilPalfhlkl.iktekkslekli 384
                 +++s+ +++++++ll+++++ i ++v +l+ v+s++G +++++l filP+l  l+   k+e ++++  +
  MMETSP1325-20131115|9328_1   7 QQVSWARHVTYTCLLFFSSVSICMFVDELGFVMSITGNVAGSLLGFILPGLVALSPnVKPELYNTGAKV 75 
                 6789***********************************************999741455555555444 PP

>> PF11045.3  Putative inner membrane protein of Enterobacteriaceae
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.0   1.6e-05      0.11      10      54 ..      16      61 ..       6      97 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.6e-05
   PF11045.3 10 vvccfllfivvllslkkevkgafr.aagrgelGlllfllPGavasf 54
                  +c+l+f+ v + + +   g +   +g+    ll f+lPG+va  
  MMETSP1325-20131115|9328_1 16 TYTCLLFFSSVSICMFVDELGFVMsITGNVAGSLLGFILPGLVALS 61
                3479999*9999988887777665478888889**********965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|9329_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 555.95
//
Query:       MMETSP1325-20131115|9330_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       606  (0.0443242); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 528.09
//
Query:       MMETSP1325-20131115|9331_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 581.24
//
Query:       MMETSP1325-20131115|9333_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-14   51.2   2.3    6.6e-10   38.3   1.2    2.2  2  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.096   10.7   0.1       0.12   10.3   0.0    1.3  1  PF11715.3  Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   1.2   9.6e-14   6.6e-10       4      39 .]       3      38 ..       1      38 [. 0.95
   2 !   11.7   0.0   2.4e-05      0.16      13      39 .]      95     131 ..      83     131 .. 0.92

  Alignments for each domain:
  == domain 1    score: 38.3 bits;  conditional E-value: 9.6e-14
                EEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  4 katlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                k  l+gH s V+++++s+d ++++s+S+Dgt r+W+
  MMETSP1325-20131115|9333_1  3 KGDLDGHHSLVYDIRWSDDDRFIVSASADGTARVWS 38
                67799******************************7 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 2.4e-05
                 SEEEEEEESS..........STEEEEEETTSEEEEEE CS
  PF00400.27  13 pVtcvafspd..........gpllasgSrDgtirlWd 39 
                 +V++ af p           +  +++   Dg++r++d
  MMETSP1325-20131115|9333_1  95 FVYSAAFVPLvtsnksksdgPGQIVTVAFDGKVRMFD 131
                 7999999999*************************98 PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   1.8e-05      0.12     228     253 ..      19      44 ..       3      91 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 1.8e-05
   PF11715.3 228 vegqtfvftlsrDgkLRvWnletgqc 253
                  +++ f+++ s+Dg+ RvW+l    +
  MMETSP1325-20131115|9333_1  19 SDDDRFIVSASADGTARVWSLGSLVK 44 
                 68899***************988777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 650.44
//
Query:       MMETSP1325-20131115|9334_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|9338_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 390.71
//
Query:       MMETSP1325-20131115|9339_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 341.70
//
Query:       MMETSP1325-20131115|9336_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-13   48.6  11.4    1.3e-09   36.9   1.3    2.1  2  PF11700.3 Vacuole effluxer Atg22 like


Domain annotation for each model (and alignments):
>> PF11700.3  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.1   1.4e-07    0.0019     225     335 ..      38     148 ..       7     162 .. 0.75
   2 !   36.9   1.3   9.2e-14   1.3e-09     380     475 ..     162     258 ..     147     260 .. 0.91

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.4e-07
   PF11700.3 225 lrlvllivGlwwlvftipaflwlkdrpgpkgtksgesyllygwkslirtf.kqarklkdvllfLvawfllsdgiatvsslavlfaktelgmstaalillsilatlaavlGaf 335
                 +r++ + + l++  + ++ +++l +rp  ++ ++ge y l g++++ rt  k + + + +  f +++++++ +   ++++   ++++ +     +l+l + +a++a+vl a 
  MMETSP1325-20131115|9336_1  38 ARIAQVAIVLITTPLFVVGIRMLGPRPALHELPEGEGYWLVGFRQISRTTaKLTAEFSTLGRFFIGYMFWQSATDSIVTVSGAMFSAKIAQ-SKMLTLKTSVAVAAGVLSAC 148
                 36666666666666667888899999999*****************98764889999***************9999999999999977765.55688888888888888775 PP

  == domain 2    score: 36.9 bits;  conditional E-value: 9.2e-14
   PF11700.3 380 pwemyvlavlyglvlgglssysrsmfseliPrGkeaaFFaLfaitdkgssviGpllvglitdrtgniriaflflavLlllplpll.llvdvergrre 475
                    m v   l g+++g + +  r ++  l+P G ea+  +++++++k+ ++  p+l+ li + tg+ir+a+l + ++ l+++++l  +vd+e+g  e
  MMETSP1325-20131115|9336_1 162 SGGMLVIMPLLGFAQGWILPAQRNLLYTLMPGGCEAEIIGFYEFMGKIVGWAVPALYLLINQSTGSIRPAILTMPAFWLVGVAILlATVDTEKGISE 258
                 4458888888999999999****************************************************************9999******9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.59
# Mc/sec: 1173.81
//
Query:       MMETSP1325-20131115|9340_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0068   16.3   6.1     0.0072   16.2   4.2    1.0  1  PF09805.4  Nucleolar protein 12 (25kDa)
  ------ inclusion threshold ------
      0.055   13.1   5.5      0.061   12.9   3.8    1.1  1  PF08595.6  RXT2-like, N-terminal
       0.07   11.3   5.6      0.077   11.2   3.9    1.0  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
       0.21   10.3   7.1       0.24   10.1   4.9    1.1  1  PF04514.7  Bluetongue virus non-structural protein NS2
       0.23   10.8   4.1       0.24   10.7   2.9    1.1  1  PF03286.9  Pox virus Ag35 surface protein
       0.31   10.7   9.8       0.32   10.7   6.8    1.0  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
       0.34    9.4  15.2       0.36    9.3  10.5    1.0  1  PF10446.4  Protein of unknown function (DUF2457)
       0.36   10.2   5.6       0.43    9.9   3.8    1.1  1  PF11861.3  Domain of unknown function (DUF3381)
       0.39    9.8   6.4       0.45    9.6   4.5    1.0  1  PF04935.7  Surfeit locus protein 6
       0.67    8.2  12.1       0.65    8.2   8.4    1.0  1  PF03344.10 Daxx Family
       0.68    9.1   7.3       0.71    9.0   5.1    1.0  1  PF07423.6  Protein of unknown function (DUF1510)
       0.99    8.9  10.5        1.1    8.7   7.3    1.1  1  PF04889.7  Cwf15/Cwc15 cell cycle control protein
        1.3    8.1   8.5        1.3    8.1   5.9    1.0  1  PF06524.7  NOA36 protein
        1.5    8.3   5.1        1.6    8.2   3.5    1.1  1  PF06088.6  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
        1.9    6.6  14.6        2.1    6.4  10.1    1.0  1  PF04006.7  Mpp10 protein
        2.6    7.6  13.3        2.9    7.5   9.2    1.1  1  PF04050.9  Up-frameshift suppressor 2
        2.8    5.5  15.2        3.1    5.4  10.5    1.0  1  PF04147.7  Nop14-like family
        3.3    6.5  10.8        3.6    6.3   7.5    1.0  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
        3.7    6.0   9.6          4    5.9   6.6    1.0  1  PF03985.8  Paf1
        3.7    6.5   7.8        3.8    6.5   5.4    1.1  1  PF05009.7  Epstein-Barr virus nuclear antigen 3 (EBNA-3)
        4.1    6.2  10.0        4.4    6.1   7.0    1.0  1  PF09073.5  BUD22
        4.3    7.0  14.7        4.7    6.9  10.2    1.1  1  PF05887.6  Procyclic acidic repetitive protein (PARP)
          5    4.9  12.0        5.4    4.8   8.3    1.0  1  PF02724.9  CDC45-like protein
        6.5    5.7  10.1        6.6    5.6   7.0    1.1  1  PF01056.13 Myc amino-terminal region
        7.2    6.0  16.9        8.6    5.7  11.7    1.1  1  PF04546.8  Sigma-70, non-essential region
        7.8    5.7   7.2        8.2    5.7   5.0    1.0  1  PF14153.1  Spore coat protein CotO
         10    5.5   9.1         12    5.2   6.3    1.2  1  PF04281.8  Mitochondrial import receptor subunit Tom22


Domain annotation for each model (and alignments):
>> PF09805.4  Nucleolar protein 12 (25kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   4.2   1.4e-05    0.0072      57     111 ..      17      74 ..       7      87 .. 0.73

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.4e-05
   PF09805.4  57 iReerkkelekqlkefkealkeleeeeddeeeeeeekeeeeeed...ewegfnedeee 111
                  R er++ l+++ +e+  a++++eee+d+++e+e+++++ ee+    e+e ++ +e+e
  MMETSP1325-20131115|9340_1  17 WRRERHAMLARREAERDGAAERTEEEDDEDDEDEDDDDDAEESVavvEEEDAEAPEPE 74 
                 699****************999999977777777666666655566544444423332 PP

>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.8   0.00012     0.061      35      75 ..      18      58 ..       6      73 .. 0.49

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.00012
   PF08595.6 35 nGserkvlsrkrkkkkkepridedenelddededdeeeede 75
                  +++ +l r++       +  e+e+++ddededd+++ +e
  MMETSP1325-20131115|9340_1 18 RRERHAMLARREAERDGAAERTEEEDDEDDEDEDDDDDAEE 58
                45566777744444422222222222222233333333332 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.9   0.00015     0.077     343     386 ..      34      72 ..      17      83 .. 0.48

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00015
                 XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF05793.7 343 klkkkkkekdkkdSddeedsddsDideedsvslvkakKkkekkk 386
                 +    ++e  +++ d++++++d+D+d e+sv++v ++   e+++
  MMETSP1325-20131115|9340_1  34 G----AAERTEEEDDEDDEDEDDDDDAEESVAVVEEED-AEAPE 72 
                 2....222223333344444445555555665554443.44444 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.9   0.00047      0.24     223     275 ..       7      59 ..       3      69 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00047
   PF04514.7 223 rleerveklkldleekredlkkeqeeeekvetesddedeegedseeeetkses 275
                 r+e+ +  ++++ e++    ++e e+   +e++++++de++ed+++++ ++es
  MMETSP1325-20131115|9340_1   7 RVEASQLGVHWRRERHAMLARREAERDGAAERTEEEDDEDDEDEDDDDDAEES 59 
                 5666656699******99999*9999999999999999999998887766665 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.9   0.00048      0.24      74     115 ..      28      69 ..       8      86 .. 0.46

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00048
   PF03286.9  74 kekeeeeekkeeededkdteenendddekeeskdskesasan 115
                 +e e  ++ +++e+ed ++ e+e+ddd+ ees    e+  a 
  MMETSP1325-20131115|9340_1  28 REAERDGAAERTEEEDDEDDEDEDDDDDAEESVAVVEEEDAE 69 
                 222222222222222222233333344444444433333333 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   6.8   0.00064      0.32     255     291 ..      30      69 ..       7      82 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00064
                 XXXXXXXXXXXXXXXX.XXXXXXXX..XXXXXX------- CS
   PF03153.8 255 iQvDGagddssdesee.deeadede..eekdkvieeDldd 291
                 +  DGa++  ++e++e de++d+d+  ee  +v+ee++ +
  MMETSP1325-20131115|9340_1  30 AERDGAAERTEEEDDEdDEDEDDDDdaEESVAVVEEEDAE 69 
                 678***9999997777533333333346666667777655 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  10.5   0.00072      0.36      43      83 ..      28      68 ..      12      85 .. 0.50

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00072
   PF10446.4 43 eeaeeealeeedededdeeddddeDeddddddddeDdedde 83
                +eae + + e  e+edde+d+d++D+dd+++     +e+d+
  MMETSP1325-20131115|9340_1 28 REAERDGAAERTEEEDDEDDEDEDDDDDAEESVAVVEEEDA 68
                45554433333344444444443333333333332222222 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.8   0.00085      0.43      85     135 ..      16      69 ..      13      78 .. 0.51

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00085
   PF11861.3  85 kWRkkvrkelgekekkkek....eeeeeeeeveekdeeeqideelkellekelak 135
                  WR +  + l++ e +++     +eee++e+ e++d++++++e+++   e+e a+
  MMETSP1325-20131115|9340_1  16 HWRRERHAMLARREAERDGaaerTEEEDDEDDEDEDDDDDAEESVA-VVEEEDAE 69 
                 5888888888888876653222233333333333333333333333.44444443 PP

>> PF04935.7  Surfeit locus protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   4.5   0.00088      0.45       2      53 ..      19      70 ..      18      81 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00088
   PF04935.7  2 ssreelleerrrkreerkerkkekrkeakkkekeqkeekeekkeeeekssks 53
                ++r+++l++r  +r  + er +e+++e++++e+++++++e+ +  ee++ + 
  MMETSP1325-20131115|9340_1 19 RERHAMLARREAERDGAAERTEEEDDEDDEDEDDDDDAEESVAVVEEEDAEA 70
                6899999999999999999999999999999998888888877766666533 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   8.4    0.0013      0.65     438     477 ..      29      71 ..       5      85 .. 0.44

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0013
  PF03344.10 438 eseeeekae...keedeeddekeeedkseeeeeeeeeeeeeee 477
                 e+e +  ae   +e+de+d++++++d++ee+   +eee+ e  
  MMETSP1325-20131115|9340_1  29 EAERDGAAErteEEDDEDDEDEDDDDDAEESVAVVEEEDAEAP 71 
                 3333333330003333333333333333333333333333322 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   5.1    0.0014      0.71      66     119 ..      29      69 ..       8      82 .. 0.38

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0014
   PF07423.6  66 keeekeaakdedkeddsesekkdeeseeeeeeekekkeeeseedeketeekees 119
                 + e++ aa+ +++edd+++e++d+             ++++ee   ++ee++ +
  MMETSP1325-20131115|9340_1  29 EAERDGAAERTEEEDDEDDEDEDD-------------DDDAEESVAVVEEEDAE 69 
                 233333333333333111111111.............11222222222222222 PP

>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   7.3    0.0022       1.1     113     150 ..      23      57 ..       6      70 .. 0.49

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0022
   PF04889.7 113 kleeareidaddsdkseeesdesdddsdddddeDetae 150
                 ++  +re + d ++++    +e+dd++d+d+d+D++ae
  MMETSP1325-20131115|9340_1  23 AMLARREAERDGAAERT---EEEDDEDDEDEDDDDDAE 57 
                 24455555556543333...222222232222222222 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.9    0.0025       1.3     275     301 ..      36      61 ..      10      77 .. 0.46

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0025
   PF06524.7 275 ddeeesaedydeeededddddeeedet 301
                  +  e+++d+d+ ededdddd ee  +
  MMETSP1325-20131115|9340_1  36 AERTEEEDDEDD-EDEDDDDDAEESVA 61 
                 122222222222.22222222222222 PP

>> PF06088.6  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.5    0.0032       1.6     124     152 ..      36      68 ..      15      79 .. 0.57

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0032
   PF06088.6 124 ksssededdeddededeaakiesn....sdsee 152
                  +++e+eddeddeded+++++e++    ++++ 
  MMETSP1325-20131115|9340_1  36 AERTEEEDDEDDEDEDDDDDAEESvavvEEEDA 68 
                 345556666666666666666666555322222 PP

>> PF04006.7  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  10.1    0.0042       2.1     270     324 ..      28      79 ..      18      82 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0042
   PF04006.7 270 keavkkeadekskeedeeddeeeedqdeeeekeaakdkvkkdekeaeevdeksde 324
                 +e    e d   ++++eedde++ed+d+++++e  +  v++++ ea e++++s++
  MMETSP1325-20131115|9340_1  28 RE---AERDGAAERTEEEDDEDDEDEDDDDDAEESVAVVEEEDAEAPEPEPESPD 79 
                 33...44455556666666666666666666665667889999999999998886 PP

>> PF04050.9  Up-frameshift suppressor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   9.2    0.0058       2.9      17      63 ..      28      74 ..      15      83 .. 0.58

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0058
   PF04050.9 17 peededdessdeeeeeeedeeedeeseseeeeievtrkeeevdpeee 63
                 e++ d   +  eee++ed+e++++ ++ ee++ v ++e+   pe e
  MMETSP1325-20131115|9340_1 28 REAERDGAAERTEEEDDEDDEDEDDDDDAEESVAVVEEEDAEAPEPE 74
                45555555555555555555555566666666666666666655555 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  10.5    0.0061       3.1     340     385 ..      30      73 ..      14      83 .. 0.49

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0061
   PF04147.7 340 eeeegvededeeeddddeeeeeedvdedeeeedeedeesddeeeee 385
                 +e++g+++  eeedd+d+e  +ed d+d ee+    ee+d e  e 
  MMETSP1325-20131115|9340_1  30 AERDGAAERTEEEDDEDDE--DEDDDDDAEESVAVVEEEDAEAPEP 73 
                 2224444444444444444..3333444444444444444443333 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   7.5    0.0071       3.6      30      80 ..      25      78 ..      11      83 .. 0.57

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0071
  PF03896.11 30 asaqdltedeeaeddvvdedeedeaeveedekte..aeeeedeeea.gevkasp 80
                 + +++  d +ae +++++de+de e ++d+ +e  a +ee++ ea +   +sp
  MMETSP1325-20131115|9340_1 25 LARREAERDGAAERTEEEDDEDDEDEDDDDDAEEsvAVVEEEDAEApEPEPESP 78
                334566666677777777777777777777666653334444445533333455 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   6.6    0.0078         4     354     403 ..      21      70 ..       7      83 .. 0.46

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0078
   PF03985.8 354 eekerdklrakfdpiefeevdedeeeeeeqrseeeeeeeeedeeeeesee 403
                  + +  +++a++d + + +++ed+e++e+++++++ ee  +  eee++e+
  MMETSP1325-20131115|9340_1  21 RHAMLARREAERDGAAERTEEEDDEDDEDEDDDDDAEESVAVVEEEDAEA 70 
                 33444556666666555444444444333333333333333222222222 PP

>> PF05009.7  Epstein-Barr virus nuclear antigen 3 (EBNA-3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   5.4    0.0076       3.8     169     228 ..       2      59 ..       1      81 [. 0.50

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0076
   PF05009.7 169 PWlkanPnevpydeglteeeikaaflrgralglealrlegepdedaivEtsseeedvese 228
                 PWl  +P  ++ + g++ +  ++a+l  r  +++ ++   e+++d   E++++++d e+ 
  MMETSP1325-20131115|9340_1   2 PWL--RPRVEASQLGVHWRRERHAMLARREAERDGAAERTEEEDDEDDEDEDDDDDAEES 59 
                 677..4544555555665666666666666666655555555555555555555444432 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   7.0    0.0087       4.4     173     209 ..      29      67 ..      12      82 .. 0.42

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0087
   PF09073.5 173 eessesedssddeeseeddsdsdeeeesdse..dlsqyd 209
                 e++ +++ ++++ee++edd+d+d + ++++    +++ d
  MMETSP1325-20131115|9340_1  29 EAERDGAAERTEEEDDEDDEDEDDDDDAEESvaVVEEED 67 
                 222222222222222222222222222222211222222 PP

>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  10.2    0.0093       4.7      69     121 ..      33      83 ..      19      88 .] 0.36

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0093
   PF05887.6  69 etepeeegeeetepeeegeeetepee.eeepepepetepepepepepepepepG 121
                 +   e + ee+ e +e+ +++ + ee     e e    pepep  e  p+ e G
  MMETSP1325-20131115|9340_1  33 DGAAERTEEEDDEDDEDEDDDDDAEEsVAVVEEEDAEAPEPEP--E-SPDFELG 83 
                 2222333222222222222222222211111222222223333..2.2444555 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   8.3     0.011       5.4     118     165 ..      21      69 ..       9      81 .. 0.41

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.011
   PF02724.9 118 rdayealvemkeeee..eesdedsdseddeeeeessasekrksesdedee 165
                 r+a+ a++e ++  +  e+ +e++d++d++e+++ +a+e+    ++ed e
  MMETSP1325-20131115|9340_1  21 RHAMLARREAERD-GaaERTEEEDDEDDEDEDDDDDAEESVAVVEEEDAE 69 
                 4444444332211.133333333333333333333333333333333333 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   7.0     0.013       6.6     221     252 ..      35      66 ..       7      79 .. 0.52

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.013
  PF01056.13 221 ssgedseseeeeeeeeeeeeeeeiDvvtvekr 252
                 + + + e+++e++e+e+++++ e  v  ve+ 
  MMETSP1325-20131115|9340_1  35 AAERTEEEDDEDDEDEDDDDDAEESVAVVEEE 66 
                 22223333333344444444444444444443 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  11.7     0.017       8.6      38      78 ..      33      74 ..      19      81 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.017
   PF04546.8 38 eeeaeeeseddeeeeeddddddededeee...eseeadegpdpe 78
                + +ae ++e+d+e++ed +ddd+d +e +    +ee+ e+p pe
  MMETSP1325-20131115|9340_1 33 DGAAERTEEEDDEDDED-EDDDDDAEE-SvavVEEEDAEAPEPE 74
                22222233333333333.333333333.2467555666666655 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.0     0.016       8.2      72     118 ..      29      75 ..       9      82 .. 0.49

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.016
   PF14153.1  72 eaesedeqesseqeeiaqeveeeeeeeeekqeevekekeaekeetel 118
                 eae+   +e  e+e  +++++e++ + +e++  v +e+ ae+ e+e 
  MMETSP1325-20131115|9340_1  29 EAERDGAAERTEEEDDEDDEDEDDDDDAEESVAVVEEEDAEAPEPEP 75 
                 33333334444444434444444444444444444444444444433 PP

>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   6.3     0.025        12      21      52 ..      32      59 ..      17      70 .. 0.41

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.025
   PF04281.8 21 ekaeeesddeeedeedtdsdisddsdveedEt 52
                ++ ++e+++ee+de+d d+d  dd+d  ++E+
  MMETSP1325-20131115|9340_1 32 RDGAAERTEEEDDEDDEDED--DDDD--AEES 59
                22222222222222222222..2222..3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       779  (0.0569778); expected 273.4 (0.02)
Passed bias filter:                      543  (0.0397162); expected 273.4 (0.02)
Passed Vit filter:                       140  (0.0102399); expected 13.7 (0.001)
Passed Fwd filter:                        40  (0.00292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.48u 0.45s 00:00:00.93 Elapsed: 00:00:00.76
# Mc/sec: 277.47
//
Query:       MMETSP1325-20131115|9346_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-08   33.3   0.5      0.017   15.0   0.0    3.1  3  PF13516.1 Leucine Rich repeat
  ------ inclusion threshold ------
        2.3    7.6   6.0          5    6.5   0.0    2.6  3  PF04400.8 Protein of unknown function (DUF539)


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0   0.0     0.009        61      14      24 .]       1      11 [.       1      11 [. 0.91
   2 !   15.0   0.0   2.5e-06     0.017       3      23 ..      15      35 ..      13      36 .. 0.90
   3 !   11.7   0.0   2.8e-05      0.19       4      23 ..      40      59 ..      37      60 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.009
   PF13516.1 14 igdeGlsaLan 24
                i+d G++aLa+
  MMETSP1325-20131115|9346_1  1 ITDVGAQALAS 11
                89*******95 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 2.5e-06
   PF13516.1  3 nLtsLdLsnNqigdeGlsaLa 23
                 Lt++ L+++q+gd G++aLa
  MMETSP1325-20131115|9346_1 15 GLTEIWLNDTQVGDAGVQALA 35
                599999**************8 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 2.8e-05
   PF13516.1  4 LtsLdLsnNqigdeGlsaLa 23
                Lt + L n+++gd G++aLa
  MMETSP1325-20131115|9346_1 40 LTGISLDNTKVGDAGVQALA 59
                5556899************8 PP

>> PF04400.8  Protein of unknown function (DUF539)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0   0.00073         5       6      18 ..       7      19 ..       4      24 .. 0.77
   2 ?    4.3   0.1    0.0035        24      12      21 ..      37      46 ..      35      48 .. 0.82
   3 ?   -3.2   0.6      0.83   5.6e+03      12      14 ..      61      63 ..      60      63 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00073
   PF04400.8  6 KpikGSCGGlaal 18
                + ++ +CGGl+++
  MMETSP1325-20131115|9346_1  7 QALASTCGGLTEI 19
                567779****987 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0035
   PF04400.8 12 CGGlaalGid 21
                CGGl+ + +d
  MMETSP1325-20131115|9346_1 37 CGGLTGISLD 46
                ****998776 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 0.83
   PF04400.8 12 CGG 14
                CGG
  MMETSP1325-20131115|9346_1 61 CGG 63
                **9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.45
# Mc/sec: 340.82
//
Query:       MMETSP1325-20131115|9345_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00036   19.9   1.8      0.012   15.1   1.2    2.3  1  PF12799.2  Leucine Rich repeats (2 copies)
    0.00053   19.6   3.8        1.5    9.0   0.1    3.2  3  PF13516.1  Leucine Rich repeat
    0.00068   19.4   2.1     0.0036   17.0   0.8    2.2  2  PF05725.7  FNIP Repeat
    0.00088   18.8   2.2       0.37   10.8   0.1    3.1  3  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.014   14.5   0.2        4.4    6.5   0.0    2.1  2  PF12841.2  YvrJ protein family
       0.05   13.0   0.1         10    5.6   0.0    2.2  2  PF07873.6  YabP family
       0.13   11.3   0.0       0.36    9.9   0.0    1.6  1  PF07900.6  Protein of unknown function (DUF1670)


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   1.2   6.1e-06     0.012       2      34 ..       2      55 ..       2      56 .] 0.67

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.1e-06
   PF12799.2  2 nLevLdLsnN.....nIkdlppe...............lanLp.nLktLnLsnN 34
                n e+LdL+++     nIkdlp +               ++ Lp + ++LnL+ +
  MMETSP1325-20131115|9345_1  2 NIETLDLQSCkklegNIKDLPQSithlnlavcmklegnIKDLPqSITHLNLEFC 55
                89********988888*****873333333333333334456656888888876 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.1   0.00077       1.5       3      14 ..       2      13 ..       2      23 .. 0.80
   2 ?    4.8   0.1     0.017        34       2      12 ..      23      33 ..      17      43 .. 0.82
   3 !    6.8   0.1     0.004       7.7       2      12 ..      45      55 ..      39      56 .] 0.91

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00077
   PF13516.1  3 nLtsLdLsnNqi 14
                n+++LdL++++ 
  MMETSP1325-20131115|9345_1  2 NIETLDLQSCKK 13
                89********83 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.017
   PF13516.1  2 knLtsLdLsnN 12
                +++t+L+L  +
  MMETSP1325-20131115|9345_1 23 QSITHLNLAVC 33
                689****9755 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.004
   PF13516.1  2 knLtsLdLsnN 12
                +++t+L+L ++
  MMETSP1325-20131115|9345_1 45 QSITHLNLEFC 55
                689******99 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.2   0.00028      0.55      13      41 ..       2      30 ..       1      33 [. 0.64
   2 !   17.0   0.8   1.9e-06    0.0036       7      41 ..      18      52 ..      12      55 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00028
   PF05725.7 13 nleiLilgrdFnqkil..igsLPnSlkeLyF 41
                n+e L l ++++ k++  i  LP+S+++L++
  MMETSP1325-20131115|9345_1  2 NIETLDL-QSCK-KLEgnIKDLPQSITHLNL 30
                6777777.6666.444457777777777765 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 1.9e-06
   PF05725.7  7 igeLPsnleiLilgrdFnqkiligsLPnSlkeLyF 41
                i  LP+++++L+l    + + +i  LP+S+++L++
  MMETSP1325-20131115|9345_1 18 IKDLPQSITHLNLAVCMKLEGNIKDLPQSITHLNL 52
                678**********888888888***********98 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.1   0.00019      0.37       1      21 [.       2      27 ..       2      28 .. 0.81
   2 !    5.8   0.1    0.0086        17       2      21 ..      25      49 ..      24      50 .. 0.76
   3 ?    3.8   0.1     0.037        73       1      11 [.      46      56 .]      46      56 .] 0.85

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00019
                TESEEEETSS.BCB.C...HHHHHHH CS
  PF00560.28  1 nLeeLdLsgN.nlt.s...lppslsn 21
                n+e+LdL+++ +l+ +   lp s+ +
  MMETSP1325-20131115|9345_1  2 NIETLDLQSCkKLEgNikdLPQSITH 27
                799***********887777776655 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0086
                ESEEEETSS.BCB.C...HHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.s...lppslsn 21
                +++L+L  + +l+ +   lp s+ +
  MMETSP1325-20131115|9345_1 25 ITHLNLAVCmKLEgNikdLPQSITH 49
                799***9999999777777766655 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.037
                TESEEEETSSB CS
  PF00560.28  1 nLeeLdLsgNn 11
                ++++L+L +++
  MMETSP1325-20131115|9345_1 46 SITHLNLEFCR 56
                579****9996 PP

>> PF12841.2  YvrJ protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0023       4.6      19      35 ..      13      29 ..      12      32 .. 0.85
   2 ?    6.5   0.0    0.0023       4.4      19      35 ..      35      51 ..      34      54 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0023
   PF12841.2 19 RiEkkldaLtksIneLs 35
                ++E+ +++L +sI++L+
  MMETSP1325-20131115|9345_1 13 KLEGNIKDLPQSITHLN 29
                57999999999999997 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0023
   PF12841.2 19 RiEkkldaLtksIneLs 35
                ++E+ +++L +sI++L+
  MMETSP1325-20131115|9345_1 35 KLEGNIKDLPQSITHLN 51
                68999999*****9997 PP

>> PF07873.6  YabP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0053        10      44      63 ..       1      21 [.       1      22 [. 0.92
   2 ?    5.5   0.0    0.0055        11      46      63 ..      25      43 ..      24      44 .. 0.90

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0053
                ----SSSS--.EEE-----EE CS
   PF07873.6 44 Lkikklnlee.lvieGkIksl 63
                ++i++l+l++  ++eG+Ik l
  MMETSP1325-20131115|9345_1  1 MNIETLDLQScKKLEGNIKDL 21
                79********99******976 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0055
                --SSSS--.EEE-----EE CS
   PF07873.6 46 ikklnlee.lvieGkIksl 63
                i++lnl   +++eG+Ik l
  MMETSP1325-20131115|9345_1 25 ITHLNLAVcMKLEGNIKDL 43
                8999*9999*******986 PP

>> PF07900.6  Protein of unknown function (DUF1670)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00018      0.36     140     164 ..      15      39 ..       9      52 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00018
   PF07900.6 140 rGiikDiGkavsHKrkilelylkgy 164
                  G+ikD+ ++++H ++++  +l+g 
  MMETSP1325-20131115|9345_1  15 EGNIKDLPQSITHLNLAVCMKLEGN 39 
                 69****************9999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 263.13
//
Query:       MMETSP1325-20131115|9347_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   13.6   0.0      0.038   13.5   0.0    1.1  1  PF11890.3 Domain of unknown function (DUF3410)


Domain annotation for each model (and alignments):
>> PF11890.3  Domain of unknown function (DUF3410)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.8e-06     0.038       7      41 ..       5      39 ..       1      48 [. 0.82

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.8e-06
   PF11890.3  7 elsqlsltseldeaalakllrlvYDvrrDdaalRr 41
                +++  ++++e+++ +la+l+++  Dv rDd +l +
  MMETSP1325-20131115|9347_1  5 DVRDRRASEEAAKLSLAHLCNALHDVSRDDFELVQ 39
                566777888888889***************98855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 252.47
//
Query:       MMETSP1325-20131115|9349_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 368.33
//
Query:       MMETSP1325-20131115|9348_1  [L=321]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 1636.66
//
Query:       MMETSP1325-20131115|9351_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   11.4   0.1       0.16   11.1   0.0    1.0  1  PF00231.14 ATP synthase


Domain annotation for each model (and alignments):
>> PF00231.14  ATP synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   1.2e-05      0.16      80     106 ..      27      53 ..      19      60 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.2e-05
                 EE---------HHHHHHHHHHHHCTSS CS
  PF00231.14  80 vitsDrGLcGgfNsnvikaaeellkel 106
                 v++s rG+cG++  +++k ++e +++ 
  MMETSP1325-20131115|9351_1  27 VLASGRGFCGSIDISLMKITQEAMQKG 53 
                 889*******************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 380.60
//
Query:       MMETSP1325-20131115|9350_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-23   81.5   0.1    4.6e-23   80.8   0.0    1.3  1  PF03129.15 Anticodon binding domain


Domain annotation for each model (and alignments):
>> PF03129.15  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.0   3.4e-27   4.6e-23       1      90 [.     102     189 ..     102     192 .. 0.95

  Alignments for each domain:
  == domain 1    score: 80.8 bits;  conditional E-value: 3.4e-27
                 SEEEEESSSSHHHHHHHHHHHHHHHHC----EEE--SSS----HHHHHHH----EEEEE-HHHHCTTEEEEEETTTTBEEEEETTTHHHH CS
  PF03129.15   1 qvvviplgekaeeledyakklaeeLreagirvelddrsesigkklrradllgipfavvvGekelekgtvtvrdrdtgeqervsleelvek 90 
                 +v+v pl +++ee++  a+++ ++L++  ++v +d  ++ ig+++rr+d++g+pf+v+v++++le+++vtvrdrdt+eq+r+++++l + 
  MMETSP1325-20131115|9350_1 102 KVAVFPLVKNNEEVMAKAREIFAKLQKR-YNVAFD-VAGAIGRRYRRMDEAGTPFCVTVDFDTLEDDSVTVRDRDTTEQVRMPIADLYNH 189
                 79************************98.788886.9*************************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 963.43
//
Query:       MMETSP1325-20131115|9352_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0017   17.6   1.8       0.89    8.9   0.1    2.2  2  PF04977.10 Septum formation initiator
  ------ inclusion threshold ------
      0.031   14.1   4.8       0.67    9.7   0.3    2.3  2  PF13863.1  Domain of unknown function (DUF4200)
       0.39   10.3   4.1        3.7    7.2   2.9    2.1  1  PF01920.15 Prefoldin subunit
        3.5    7.5   6.4         12    5.8   0.5    2.4  2  PF14193.1  Domain of unknown function (DUF4315)
        7.4    6.1   8.9        3.7    7.1   0.4    2.8  2  PF12474.3  Polo kinase kinase


Domain annotation for each model (and alignments):
>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.1   0.00033      0.89      23      57 ..       4      39 ..       2      40 .. 0.88
   2 !    8.2   0.1   0.00054       1.5      19      56 ..      63     100 ..      54     105 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00033
  PF04977.10 23 kqeiaalqaelaklkaeneeLeaevkdLks..dedyi 57
                 +eia+ +a+l+k++a+ ++ e+   +L +  ++++i
  MMETSP1325-20131115|9352_1  4 TKEIADWKAKLKKMQADTDKTEESMFKL-DlySPERI 39
                589*********************9999.66777776 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00054
  PF04977.10  19 lyqlkqeiaalqaelaklkaeneeLeaevkdLksdedy 56 
                 + +l+++ia+++a++a+++  ++e e  +++++  +++
  MMETSP1325-20131115|9352_1  63 RPELEKDIADIKAKMAEIHGIEREYETDIEEMNLRQAR 100
                 5689**************************99435554 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.2    0.0034       9.2      80     109 ..       4      33 ..       2      35 .. 0.76
   2 ?    9.7   0.3   0.00024      0.67      12      60 ..      62     110 ..      56     114 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0034
   PF13863.1  80 eeeikklkaqleelkaeiekleekleeyqk 109
                 ++ei++ ka+l++++a+ +k+ee   ++  
  MMETSP1325-20131115|9352_1   4 TKEIADWKAKLKKMQADTDKTEESMFKLDL 33 
                 578888888888888888888887766655 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00024
   PF13863.1  12 vqlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdnea 60 
                 ++ +l++  ++i+ k++e++  e+e+e + ee++ +  + +k + +n+a
  MMETSP1325-20131115|9352_1  62 MRPELEKDIADIKAKMAEIHGIEREYETDIEEMNLRQARMDKVMPSNNA 110
                 5556666667777777777777777777777777777777776666665 PP

>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   2.9    0.0014       3.7      13      95 ..       6      94 ..       3     104 .. 0.74

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0014
                HHHHHHHHHHHHHHHHHHHHHHHHHHCTS-TT.-EEEEE----E.....EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF01920.15 13 qlqklaqqikqletqlkeielvleelellded.tkvykliGdvl.....vkqdkeevkeeLeerketlekeiktlekqleklekeleel 95
                ++ + ++++k+++++ ++ e+    l+l  ++   +  ++ +vl     +++ ++ +++eLe++++++++++ ++   +++ e+++ee+
  MMETSP1325-20131115|9352_1  6 EIADWKAKLKKMQADTDKTEESMFKLDLYSPErIVCTTKCQEVLemskaYHKGQDVMRPELEKDIADIKAKMAEIHGIEREYETDIEEM 94
                56666667777777777777777777777777334455666666544445677899***************999999999999999886 PP

>> PF14193.1  Domain of unknown function (DUF4315)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.4     0.011        29       2      16 ..      13      27 ..       4      32 .. 0.76
   2 ?    5.8   0.5    0.0043        12       6      33 ..      66      93 ..      63     100 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.011
   PF14193.1  2 kiekieaeieKtkeK 16
                k++k++a+ +Kt+e 
  MMETSP1325-20131115|9352_1 13 KLKKMQADTDKTEES 27
                778888888888775 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0043
   PF14193.1  6 ieaeieKtkeKiaelqarlkeLekqktE 33
                +e++i+  k+K+ae+    +e e+   E
  MMETSP1325-20131115|9352_1 66 LEKDIADIKAKMAEIHGIEREYETDIEE 93
                689*************999999988777 PP

>> PF12474.3  Polo kinase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1      0.08   2.2e+02      14      44 ..      45      75 ..      35      79 .. 0.81
   2 ?    7.1   0.4    0.0014       3.7      16      42 ..      79     105 ..      73     112 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.08
   PF12474.3 14 elertqllkryekEleqlerqqkreiekleq 44
                 +e  ++ k y k  + +    +++i ++++
  MMETSP1325-20131115|9352_1 45 CQEVLEMSKAYHKGQDVMRPELEKDIADIKA 75
                5899999999999999999888888877765 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0014
   PF12474.3  16 ertqllkryekEleqlerqqkreiekl 42 
                 e +  +++ye+++e+++ +q r+ + +
  MMETSP1325-20131115|9352_1  79 EIHGIEREYETDIEEMNLRQARMDKVM 105
                 788899***********9999987666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       971  (0.0710211); expected 273.4 (0.02)
Passed bias filter:                      628  (0.0459333); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|9355_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|9357_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   10.6   0.5       0.18   10.4   0.4    1.0  1  PF06728.8 GPI transamidase subunit PIG-U


Domain annotation for each model (and alignments):
>> PF06728.8  GPI transamidase subunit PIG-U
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.4   1.3e-05      0.18     136     193 ..       4      62 ..       3      78 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 1.3e-05
   PF06728.8 136 tilscvslStsslenlllllslysal.kgkallsalslalatylslypllllaplllll 193
                  il+  + +t++l+ ++  ++++  + +  a+++a +la+ +   ly+ +l+apl + l
  MMETSP1325-20131115|9357_1   4 AILTAEAATTTTLTLFATSATVAKPAsRPFAAFAAAGLAVGAAHCLYYGVLFAPLFAEL 62 
                 6888888899999999998888887756779************************9555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 366.24
//
Query:       MMETSP1325-20131115|9356_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-10   40.9   0.0    1.6e-10   40.5   0.0    1.1  1  PF00782.15 Dual specificity phosphatase, catalytic domain
    0.00089   18.5   0.1     0.0012   18.1   0.1    1.1  1  PF00102.22 Protein-tyrosine phosphatase
     0.0096   14.7   0.1       0.01   14.6   0.0    1.1  1  PF04179.7  Initiator tRNA phosphoribosyl transferase
  ------ inclusion threshold ------
      0.024   13.9   0.0      0.038   13.3   0.0    1.3  1  PF05706.7  Cyclin-dependent kinase inhibitor 3 (CDKN3)


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   4.8e-14   1.6e-10      54     122 ..      11      79 ..       6      90 .. 0.86

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 4.8e-14
                 -CGGGHHHHHHHHHHHCC----EEEE-----HHHHHHHHHHHHHHCT-HHHHHHHHHHHHSTT-SS-ST CS
  PF00782.15  54 kiskeleeavefiekaeqkgkkvlVHCqaGisRSatliiaYlmktknlslneAyefvkerrskispnag 122
                 k+  +l+++ +f+++a +++++ l+HC+ Gis S  ++++Y++ +k+l++ + +e+v + r ++     
  MMETSP1325-20131115|9356_1  11 KVLVQLPKILNFVNTAVEENRELLIHCETGISISYLIVAVYMLVKKRLRVPQILEHVVKIRRQVQLAPA 79 
                 667789**************************************************9777766665555 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1   3.5e-07    0.0012     148     216 ..       5      73 ..       2      77 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 3.5e-07
                 CGSGSHHHH....HHHHHHHHHSSTTSS-EEEES------HHHHHHHHHHHHHHHHT--TBEHHHHHHHHHTT CS
  PF00102.22 148 vpespksll....dlirkvrksktaksgpvvVhCsaGvgRtgtfvaldilleqleaeeekvdvlqivkelRkq 216
                 +p+s++++l    ++++ v++   +++  +++hC +G++ +  +va+ +l+++  +    +++l+ v ++R+q
  MMETSP1325-20131115|9356_1   5 APSSWQKVLvqlpKILNFVNTAV-EENRELLIHCETGISISYLIVAVYMLVKKRLR--V-PQILEHVVKIRRQ 73 
                 67776666667778888888888.788************************99999..6.99*********98 PP

>> PF04179.7  Initiator tRNA phosphoribosyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0     3e-06      0.01     356     407 ..      12      59 ..       4     104 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3e-06
   PF04179.7 356 LrkaLpkieefiksklsseknkkilvlcesGkdlsvgvvlailckyfdedgk 407
                 +  +Lpki +f+++++++  n+++l++ce+G  +s++ +++ + +  ++  +
  MMETSP1325-20131115|9356_1  12 VLVQLPKILNFVNTAVEE--NRELLIHCETG--ISISYLIVAVYMLVKKRLR 59 
                 5568***********999..9**********..6666665555555554444 PP

>> PF05706.7  Cyclin-dependent kinase inhibitor 3 (CDKN3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.1e-05     0.038     121     157 ..      18      54 ..      11      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.1e-05
   PF05706.7 121 eimeelatclknyrktlihcygglgrsclvaacllly 157
                 +i++ + t+++++r+ lihc  g+  s l+ a+ +l 
  MMETSP1325-20131115|9356_1  18 KILNFVNTAVEENRELLIHCETGISISYLIVAVYMLV 54 
                 5788899**********************99988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 651.81
//
Query:       MMETSP1325-20131115|9358_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 702.93
//
Query:       MMETSP1325-20131115|9359_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.54
# Mc/sec: 647.90
//
Query:       MMETSP1325-20131115|9360_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 146.72
//
Query:       MMETSP1325-20131115|9361_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.24   10.5   4.1       0.27   10.4   2.9    1.1  1  PF04888.7 Secretion system effector C (SseC) like family


Domain annotation for each model (and alignments):
>> PF04888.7  Secretion system effector C (SseC) like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.9     2e-05      0.27      82     110 ..       4      58 ..       1      83 [. 0.68

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 2e-05
   PF04888.7  82 tgvGlaaGalmiaagvagavgaaaeaaa..........................d 110
                 ++ G+a+Ga+++++++ag++gaaa  a+                           
  MMETSP1325-20131115|9361_1   4 VAGGAAGGAAAVGDAAAGGAGAAAANAPgwlfwqkshhslklpidltpswrfmyT 58 
                 34456999****************9977777777777777776655555444442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 704.81
//
Query:       MMETSP1325-20131115|9362_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-06   27.7   0.0    1.8e-06   27.6   0.0    1.1  1  PF03129.15 Anticodon binding domain


Domain annotation for each model (and alignments):
>> PF03129.15  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   1.3e-10   1.8e-06      44      87 ..       2      45 ..       1      52 [. 0.92

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 1.3e-10
                HHHHHHH----EEEEE-HHHHCTTEEEEEETTTTBEEEEETTTH CS
  PF03129.15 44 klrradllgipfavvvGekelekgtvtvrdrdtgeqervsleel 87
                k+ +++++g+p++v+vG+++++kg+  v++r  g++e+v l e 
  MMETSP1325-20131115|9362_1  2 KYFEWERKGVPLRVEVGPRDVAKGVGMVKSRLGGDKEEVQLGEG 45
                7889*****************99****************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 273.27
//
Query:       MMETSP1325-20131115|9364_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.41s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 164.46
//
Query:       MMETSP1325-20131115|9363_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.06   13.5   1.0       0.06   13.5   0.7    1.7  2  PF06444.6  NADH dehydrogenase subunit 2 C-terminus
      0.081   12.7   0.0       0.12   12.1   0.0    1.2  1  PF05950.6  Orthopoxvirus A36R protein
        2.6    7.6   8.0        1.1    8.9   2.6    2.0  2  PF07332.6  Protein of unknown function (DUF1469)
        4.8    6.6   5.5       0.43   10.0   0.3    1.8  2  PF01708.11 Geminivirus putative movement protein
        5.7    6.6  13.5       0.76    9.4   1.0    2.9  3  PF11298.3  Protein of unknown function (DUF3099)


Domain annotation for each model (and alignments):
>> PF06444.6  NADH dehydrogenase subunit 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2       2.1   5.9e+03       1       5 [.      54      58 ..      46      62 .. 0.57
   2 ?   13.5   0.7   2.2e-05      0.06      15      50 ..      74     107 ..      70     110 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2.1
   PF06444.6  1 LfFYL 5 
                L FYL
  MMETSP1325-20131115|9363_1 54 LIFYL 58
                34444 PP

  == domain 2    score: 13.5 bits;  conditional E-value: 2.2e-05
   PF06444.6  15 lppntsnsttkWrlktkkntlllsiliilsllllpl 50 
                 ++pn ++ t+ W +k+    +++++l++++ +l+p+
  MMETSP1325-20131115|9363_1  74 NYPNIVYGTMDWMMKS--GWFWMATLLVFTCCLMPM 107
                 79**************..579**************9 PP

>> PF05950.6  Orthopoxvirus A36R protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.4e-05      0.12       8      69 ..      96     159 ..      91     168 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.4e-05
   PF05950.6   8 tvtvvagtilvcyilyicrkkirtvynd..nkiimtklkkikssnssksskstdsesdwedhcs 69 
                 t+ v +  ++  yi+y+ r+       d    i    ++ +ks +ssk+s  td  s  + h  
  MMETSP1325-20131115|9363_1  96 TLLVFTCCLMPMYIVYVLRRSFSPSRADigREIASGWINGVKSGESSKTSGETDVLSTVDGHIE 159
                 677788888999**********999988435788889********************9999975 PP

>> PF07332.6  Protein of unknown function (DUF1469)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.6   0.00039       1.1      33      90 ..       8      63 ..       4      65 .. 0.72
   2 ?    0.4   0.1      0.16   4.4e+02      65      83 ..      88     104 ..      78     120 .. 0.67

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00039
   PF07332.6 33 ragkglgllgaalvlalvallvllaalvaaLaealvlpaw.lAalivavvllllAgila 90
                  g+++gl+ga+ v++ +  + +   l ++L+  ++   w + +liv v+++ l+++la
  MMETSP1325-20131115|9363_1  8 DNGQSVGLMGAGIVILWLVDIIAN--LRLGLEIIYW-TGWeALLLIVSVLIFYLTWVLA 63
                568999999999888766555555..5555533676.899444566***********98 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.16
   PF07332.6  65 ealvlpawlAalivavvll 83 
                 +++++  w+A l+v+  +l
  MMETSP1325-20131115|9363_1  88 KSGWF--WMATLLVFTCCL 104
                 34443..677777776555 PP

>> PF01708.11  Geminivirus putative movement protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.3   0.00016      0.43      41      66 ..      46      71 ..      41      83 .. 0.83
   2 ?   -2.4   0.4       1.2   3.2e+03      35      56 ..      94     112 ..      86     114 .. 0.47

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00016
  PF01708.11 41 ailtlvavlvlYLlytlvlkDlilvl 66
                a+l++v+vl++YL ++l   D  + +
  MMETSP1325-20131115|9363_1 46 ALLLIVSVLIFYLTWVLANSDPNFFV 71
                57899***********9888866655 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 1.2
  PF01708.11  35 srvgeiailtlvavlvlYLlyt 56 
                      +    l+ +   Y++y+
  MMETSP1325-20131115|9363_1  94 MATLLVFTCCLMPM---YIVYV 112
                 43334444444444...44443 PP

>> PF11298.3  Protein of unknown function (DUF3099)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.5      0.01        27      44      64 ..      12      32 ..       5      35 .. 0.86
   2 ?    9.4   1.0   0.00028      0.76      36      66 ..      39      67 ..      32      69 .. 0.82
   3 ?    0.2   0.1      0.21   5.8e+02      41      55 ..      92     106 ..      76     121 .. 0.67

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.01
   PF11298.3 44 alliivlavpLPwiAVvlANd 64
                ++ ++++ +++ w++ ++AN 
  MMETSP1325-20131115|9363_1 12 SVGLMGAGIVILWLVDIIANL 32
                57788999************5 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00028
   PF11298.3 36 vvyslgwlalliivlavpLPwiAVvlANdrp 66
                + +    + +l+++++v++ ++  vlAN++p
  MMETSP1325-20131115|9363_1 39 IYW--TGWEALLLIVSVLIFYLTWVLANSDP 67
                334..568889999**************987 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 0.21
   PF11298.3  41 gwlalliivlavpLP 55 
                  w+a l++  + ++P
  MMETSP1325-20131115|9363_1  92 FWMATLLVFTCCLMP 106
                 566666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       578  (0.0422762); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.63
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|9365_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.82    9.4   3.2       0.97    9.1   2.2    1.3  1  PF11705.3 DNA-directed RNA polymerase III subunit Rpc31


Domain annotation for each model (and alignments):
>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.2   7.1e-05      0.97     206     229 ..       8      32 ..       5      68 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 7.1e-05
   PF11705.3 206 edDYnaekYFDnGedDdygD..edgd 229
                  + Y a + FD+G+ D+ygD  +dg+
  MMETSP1325-20131115|9365_1   8 RTRYGACEWFDEGD-DEYGDqvKDGG 32 
                 5669999*******.99999664443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 563.85
//
Query:       MMETSP1325-20131115|9367_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 355.02
//
Query:       MMETSP1325-20131115|9366_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.6   0.0      0.022   14.5   0.0    1.1  1  PF12814.2 Meiotic cell cortex C-terminal pleckstrin homology


Domain annotation for each model (and alignments):
>> PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.6e-06     0.022      27     112 ..      66     155 ..      41     166 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.6e-06
   PF12814.2  27 sekrhkRyvwvhpyertllWsskkpksekasekksks...vkiesvlsvkdenplpkglekanfnksililtpk.ralkltaetrerhev 112
                  ++++kR + ++++ +tl+Ws k +k+++a+++  k     k+ s++s++ ++   k+++k++ +++ +i +++  + +++++++e +++
  MMETSP1325-20131115|9366_1  66 GDTSKKRLLKLDQDGETLIWSVKTSKTSSAKNQLDKLdapFKLGSITSITRGAFPGKASTKKKAKRCFTIASDNgNTYRVETKDSETRDI 155
                 4678999999************999988888776554446899*********99999999888999999998752456677777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 803.48
//
Query:       MMETSP1325-20131115|9368_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-13   49.9   0.6      3e-13   49.4   0.4    1.2  1  PF03992.11 Antibiotic biosynthesis monooxygenase


Domain annotation for each model (and alignments):
>> PF03992.11  Antibiotic biosynthesis monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.4   2.2e-17     3e-13       2      77 ..      45     126 ..      44     127 .. 0.93

  Alignments for each domain:
  == domain 1    score: 49.4 bits;  conditional E-value: 2.2e-17
                 EEEEEEEEEEGGHHHHHHHHHHHHHHHHHTT-----EEEEEE.......CTTSCEEEEEEEEESSHHHHHHHHTSHHHHHHHH CS
  PF03992.11   2 vivvnefkvkpgaeeafeeafaeaaesllaeepGflgyellr.......stddpdevvvieeWeseaafrahlksphfkaahe 77 
                 ++v n+f+vk+g+e+afe+++a++ ++l  + +Gf+ +  lr       ++dd+  +v  ++We    f+a++k ++fk+ah 
  MMETSP1325-20131115|9368_1  45 FVVQNRFRVKAGREAAFEKRWADRESRL-GTLDGFRFFCMLRrvddeakPADDDVNYVSCTVWEEFSNFEAWRKGDAFKEAHG 126
                 89************************99.8***********777777767888888*************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|9369_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.9e-08   31.5   0.0    6.7e-08   31.3   0.0    1.1  1  PF04129.7 Vps52 / Sac2 family
     0.0019   16.2   0.0     0.0022   16.1   0.0    1.0  1  PF06419.6 Conserved oligomeric complex COG6
  ------ inclusion threshold ------
      0.024   12.6   0.0      0.027   12.5   0.0    1.0  1  PF09763.4 Exocyst complex component Sec3


Domain annotation for each model (and alignments):
>> PF04129.7  Vps52 / Sac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   1.5e-11   6.7e-08     442     505 ..      10      72 ..       3      78 .. 0.82

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 1.5e-11
   PF04129.7 442 verllerlereveslllrlaklfkkkkeqevFLinNYdlilavLkeaeaelskeqeafqellns 505
                 + + l +l+  +++ll+rl+   +++k+++vFLinNYd il+v  e++   + e++ f e+l +
  MMETSP1325-20131115|9369_1  10 LRNDLTKLRAGIVELLKRLSEELPTPKQRLVFLINNYDQILSVFAERSIV-GEETAWFDEMLAQ 72 
                 6677999*************************************998764.4566666666665 PP

>> PF06419.6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   4.7e-07    0.0022     442     506 ..      21      85 ..       8     101 .. 0.91

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 4.7e-07
   PF06419.6 442 flelveesaselakkkkrlifliNcldlirsklspysfasekleelqekidelleeLtelqassl 506
                 ++el ++ ++el+++k+rl+fliN  d+i s +++ s++ e + +++e++ +++   +e+++s+ 
  MMETSP1325-20131115|9369_1  21 IVELLKRLSEELPTPKQRLVFLINNYDQILSVFAERSIVGEETAWFDEMLAQHRGLFVEEELSQG 85 
                 6789999**********************************************999999988865 PP

>> PF09763.4  Exocyst complex component Sec3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     6e-06     0.027     515     620 ..      16     107 ..       6     113 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6e-06
   PF09763.4 515 klikavfeslkriareepaksvadeeedkeklnrhvllieNmnhfleeLselknsevleelrdeakqefdehlelYlnavlrrplgkLieFvegveallatkkaee 620
                 kl   ++e+lkr ++e p             ++r v li N+  +l+  +e ++   + e  +   + +++h+ l++++ l + +++Li+Fv+++ea +a  ka+ 
  MMETSP1325-20131115|9369_1  16 KLRAGIVELLKRLSEELPTP-----------KQRLVFLINNYDQILSVFAERSI---VGEETAWFDEMLAQHRGLFVEEELSQGFAQLIAFVQQTEAAMAGAKAAG 107
                 66666777777777666666...........77899999999999988888888...55666666678999**************************999855554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 614.07
//
Query:       MMETSP1325-20131115|9370_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 953.84
//
Query:       MMETSP1325-20131115|9372_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|9373_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|9379_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.9    6.5  13.9         13    5.6   7.1    2.5  2  PF03245.8 Bacteriophage lysis protein


Domain annotation for each model (and alignments):
>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.014     2e+02      62      96 ..       3      37 ..       2      55 .. 0.71
   2 ?    5.6   7.1   0.00097        13       4      64 ..      68     128 ..      65     176 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.014
   PF03245.8 62 rrRLr.vkatCpavpeaasaaglgdaasarLsdaae 96
                rrRL+ +++ ++ v  ++saa +g++++ +  +a++
  MMETSP1325-20131115|9379_1  3 RRRLQeLNGPAS-VHGSSSAAEMGEEEAQETGRAKR 37
                577776665554.69999999999888766555544 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.00097
   PF03245.8   4 eakrqadkknqeleaanaeiedlqarqravaeldakhteeLadaksendrLradvaaGrrR 64 
                 e +r +d+++q   ++ +e++  +    a+ +l+a+   eLa++++en+ L+++v+  + +
  MMETSP1325-20131115|9379_1  68 EMQRLRDEVQQHCLQKDQELKMKNDELEALRALSAQQCGELAKVNEENQLLKKAVRVQHGQ 128
                 6678899999999999999999999999**************************9987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1253  (0.0916472); expected 273.4 (0.02)
Passed bias filter:                      542  (0.0396431); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.54
# Mc/sec: 847.60
//
Query:       MMETSP1325-20131115|9375_1  [L=330]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      4e-57  193.5   0.0    4.9e-57  193.2   0.0    1.0  1  PF06957.6 Coatomer (COPI) alpha subunit C-terminus
  ------ inclusion threshold ------
       0.11   11.9   1.0       0.23   10.9   0.7    1.4  1  PF06943.7 LSD1 zinc finger


Domain annotation for each model (and alignments):
>> PF06957.6  Coatomer (COPI) alpha subunit C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.2   0.0   7.2e-61   4.9e-57     187     396 ..      57     267 ..      29     282 .. 0.85

  Alignments for each domain:
  == domain 1    score: 193.2 bits;  conditional E-value: 7.2e-61
   PF06957.6 187 esalknslPavvlkls.qleerLkaayklttsGkfeeavekfrsiLlsiPLlvvdskrevaeakqLitivreyvvgLklelkrkelkkdtleqqkrlaelaayfthckLqpvhliLvLrsalnlffklknlktaasfarrLLelaP.....keevakqvrkvlqaaeknktdesqLnydernPfvvCgasyvPlyrGkkevkCPycgasfspeleG 396
                 + +l+ + Pa  ++ +    + Lk ayk+   G f e+++ f+siL+++P++v +s+ e +e+k+L+ i+rey+ +++l l   ++      +  r++el ayfthc+Lqp hl L+L+sa+   fk+kn+ taasfa+rLLel       + +   +++kv+ ++ek+  +e+ L+ydernPf++   ++vP+yrG ++vkC yc ++++pe   
  MMETSP1325-20131115|9375_1  57 DGGLRLEEPAGHVRQApVALDTLKGAYKAFHAGSFAESLDLFKSILYAVPMVVTSSRTESNEVKELLDIAREYITAIRLKLAMADV-----SDPVRMTELWAYFTHCNLQPAHLLLALKSAMISGFKIKNYITAASFAHRLLELPEvssekNADLKSKAQKVVLKSEKEGRNEHTLQYDERNPFDIDCEAFVPVYRGSPVVKCAYCNSAYQPEATN 267
                 5556666666554443034589*******************************************************998876655.....4556889*********************************************8541111133455789*****************************************************9765 PP

>> PF06943.7  LSD1 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.7   3.4e-05      0.23      12      23 ..     247     258 ..     239     259 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.4e-05
   PF06943.7  12 rGApsVRCalCd 23 
                 rG+p V+Ca C+
  MMETSP1325-20131115|9375_1 247 RGSPVVKCAYCN 258
                 8**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       462  (0.0337917); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.50
# Mc/sec: 1581.60
//
Query:       MMETSP1325-20131115|9380_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-14   53.0   4.2      0.009   16.1   0.0    5.7  5  PF13812.1  Pentatricopeptide repeat domain
    1.4e-09   37.6   0.0     0.0082   15.9   0.0    4.6  5  PF13041.1  PPR repeat family
    1.6e-08   33.8   1.1       0.11   12.3   0.0    5.0  5  PF01535.15 PPR repeat
    0.00059   19.3   0.1       0.15   11.7   0.0    2.7  2  PF13176.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.14   10.8   0.0        0.4    9.3   0.0    1.8  2  PF06239.6  Evolutionarily conserved signalling intermediate in Toll pathway
       0.22   11.9   2.4        3.4    8.2   0.1    3.2  3  PF13174.1  Tetratricopeptide repeat
       0.99    8.8   6.9       0.28   10.6   0.3    2.8  3  PF11795.3  Uncharacterized protein conserved in bacteria N-term (DUF3322)


Domain annotation for each model (and alignments):
>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   4.6e-06     0.009       3      34 .]       2      33 ..       1      33 [. 0.96
   2 !    8.7   0.0     0.001         2       4      27 ..      38      61 ..      35      66 .. 0.93
   3 !    5.9   0.1    0.0083        16       7      24 ..     163     180 ..     162     184 .. 0.87
   4 !    7.8   0.0    0.0021       4.2      12      34 .]     207     232 ..     198     232 .. 0.72
   5 !   10.9   0.0   0.00021       0.4       3      34 .]     236     268 ..     234     268 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 4.6e-06
   PF13812.1  3 tyntlitalaksgrpeaAlalleeMeqqgvkP 34
                ++n  ita++ + ++  +  l++e++++g++P
  MMETSP1325-20131115|9380_1  2 CLNVAITACSQAADWPGVIYLFSELKRAGIAP 33
                6899**************************99 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.001
   PF13812.1  4 yntlitalaksgrpeaAlalleeM 27
                y ++i a+ + g++ +Al+l++e+
  MMETSP1325-20131115|9380_1 38 YRAVIVAFEREGDWRRALELYDEF 61
                99*******************986 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.0083
   PF13812.1   7 litalaksgrpeaAlall 24 
                  ++a+ak g++ +Alal 
  MMETSP1325-20131115|9380_1 163 ALRACAKGGEWRRALALC 180
                 689***********9986 PP

  == domain 4    score: 7.8 bits;  conditional E-value: 0.0021
   PF13812.1  12 aksgrpea...AlalleeMeqqgvkP 34 
                   +++  +   ++++l+ M+++g++P
  MMETSP1325-20131115|9380_1 207 RACQSARQagaVMDVLSVMREYGLRP 232
                 444443333448************99 PP

  == domain 5    score: 10.9 bits;  conditional E-value: 0.00021
   PF13812.1   3 tyntlitala.ksgrpeaAlalleeMeqqgvkP 34 
                 ++++ +  l  ++ +++++l+++++M+++g +P
  MMETSP1325-20131115|9380_1 236 CFTIALQTLGeEAANWQLVLDVVDMMREHGRDP 268
                 6888899999559****************9776 PP

>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.2e-06    0.0082       7      47 ..       4      44 ..       2      45 .. 0.93
   2 !    7.5   0.0    0.0018       3.6       6      28 ..      38      60 ..      35      62 .. 0.92
   3 ?   -2.3   0.0         2     4e+03      10      25 ..     164     179 ..     162     182 .. 0.83
   4 !    9.8   0.0   0.00033      0.65      15      47 ..     211     243 ..     196     246 .. 0.82
   5 ?    1.8   0.0      0.11   2.1e+02      18      39 ..     250     271 ..     247     274 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 4.2e-06
   PF13041.1  7 NtlIsglckkgkveeAfklfneMkkrgikPnvyTYsilikg 47
                N+ I ++ ++ ++   + lf+e k+ gi P++  Y  +i +
  MMETSP1325-20131115|9380_1  4 NVAITACSQAADWPGVIYLFSELKRAGIAPDAANYRAVIVA 44
                899********************************999866 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0018
   PF13041.1  6 YNtlIsglckkgkveeAfklfne 28
                Y ++I ++ ++g+++ A++l++e
  MMETSP1325-20131115|9380_1 38 YRAVIVAFEREGDWRRALELYDE 60
                67899****************98 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 2
   PF13041.1  10 IsglckkgkveeAfkl 25 
                 +++++k g+++ A+ l
  MMETSP1325-20131115|9380_1 164 LRACAKGGEWRRALAL 179
                 6789999999999876 PP

  == domain 4    score: 9.8 bits;  conditional E-value: 0.00033
   PF13041.1  15 kkgkveeAfklfneMkkrgikPnvyTYsilikg 47 
                 ++++  + +++++ M++ g++Pn   ++i ++ 
  MMETSP1325-20131115|9380_1 211 SARQAGAVMDVLSVMREYGLRPNRQCFTIALQT 243
                 4566688999******************98875 PP

  == domain 5    score: 1.8 bits;  conditional E-value: 0.11
   PF13041.1  18 kveeAfklfneMkkrgikPnvy 39 
                 +++  +++ + M++ g+ P+++
  MMETSP1325-20131115|9380_1 250 NWQLVLDVVDMMREHGRDPSTI 271
                 567788999**********987 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00097       1.9       4      31 .]       4      31 ..       1      31 [. 0.93
   2 !   12.3   0.0   5.8e-05      0.11       3      25 ..      38      60 ..      37      62 .. 0.93
   3 ?    4.9   0.0     0.013        26       7      22 ..     164     179 ..     162     183 .. 0.89
   4 ?    0.0   0.0      0.49   9.5e+02      12      31 .]     211     230 ..     206     230 .. 0.74
   5 ?    1.3   0.0      0.19   3.7e+02      16      30 ..     251     265 ..     248     266 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00097
  PF01535.15  4 nslIsgyckaGkleeAlelfkeMkekGv 31
                n+ I ++++a ++  ++ lf e+k+ G+
  MMETSP1325-20131115|9380_1  4 NVAITACSQAADWPGVIYLFSELKRAGI 31
                889**********************997 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 5.8e-05
  PF01535.15  3 ynslIsgyckaGkleeAlelfke 25
                y ++I ++ ++G+++ Alel++e
  MMETSP1325-20131115|9380_1 38 YRAVIVAFEREGDWRRALELYDE 60
                7799*****************99 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.013
  PF01535.15   7 IsgyckaGkleeAlel 22 
                 +++++k G+++ Al l
  MMETSP1325-20131115|9380_1 164 LRACAKGGEWRRALAL 179
                 689**********998 PP

  == domain 4    score: 0.0 bits;  conditional E-value: 0.49
  PF01535.15  12 kaGkleeAlelfkeMkekGv 31 
                 +a++   +++++  M+e G+
  MMETSP1325-20131115|9380_1 211 SARQAGAVMDVLSVMREYGL 230
                 56666678999999999985 PP

  == domain 5    score: 1.3 bits;  conditional E-value: 0.19
  PF01535.15  16 leeAlelfkeMkekG 30 
                 ++ +l++ + M+e+G
  MMETSP1325-20131115|9380_1 251 WQLVLDVVDMMREHG 265
                 677899*******98 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   7.8e-05      0.15       8      24 ..      44      60 ..      40      75 .. 0.86
   2 ?    4.5   0.0     0.016        32       7      24 ..     165     182 ..     161     190 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 7.8e-05
   PF13176.1  8 lysrlgdyekAielyer 24
                +++r gd+++A+ely +
  MMETSP1325-20131115|9380_1 44 AFEREGDWRRALELYDE 60
                799************88 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.016
   PF13176.1   7 rlysrlgdyekAielyer 24 
                 r++ + g++++A+ l++ 
  MMETSP1325-20131115|9380_1 165 RACAKGGEWRRALALCRT 182
                 689999*******99976 PP

>> PF06239.6  Evolutionarily conserved signalling intermediate in Toll pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.2   2.3e+03     124     150 ..      20      46 ..      19      50 .. 0.72
   2 ?    9.3   0.0    0.0002       0.4     117     154 ..     212     249 ..     196     268 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 1.2
   PF06239.6 124 idvLeqmeeygvmPdketeallvniFG 150
                 i +  ++++ g+ Pd+  +  ++ +F 
  MMETSP1325-20131115|9380_1  20 IYLFSELKRAGIAPDAANYRAVIVAFE 46 
                 566778888899999887777776665 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.0002
   PF06239.6 117 prqqelaidvLeqmeeygvmPdketeallvniFGkksh 154
                  rq   ++dvL  m eyg+ P+ +  ++ ++  G+++ 
  MMETSP1325-20131115|9380_1 212 ARQAGAVMDVLSVMREYGLRPNRQCFTIALQTLGEEAA 249
                 6899999***************************9865 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.1    0.0017       3.4       9      27 ..      44      62 ..      35      63 .. 0.79
   2 ?   -3.0   0.2       6.3   1.2e+04       9      19 ..      94     105 ..      85     110 .. 0.57
   3 ?    2.2   0.0      0.14   2.8e+02       9      33 .]     166     190 ..     161     190 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0017
                HHHHHHHHHHHHHHHHHHH CS
   PF13174.1  9 syyklgdtdeAlealerli 27
                ++++ gd+++Ale++++++
  MMETSP1325-20131115|9380_1 44 AFEREGDWRRALELYDEFL 62
                455589**********996 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 6.3
                 HHHH.HHHHHHH CS
   PF13174.1   9 syyk.lgdtdeA 19 
                  + + +gd+++A
  MMETSP1325-20131115|9380_1  94 TQPAaQGDAADA 105
                 333334565554 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHHHHHHHHHHH-TT- CS
   PF13174.1   9 syyklgdtdeAlealerlikeyPdS 33 
                 +  k+g++++Al++ + l  + P+S
  MMETSP1325-20131115|9380_1 166 ACAKGGEWRRALALCRTLDVRQPGS 190
                 566889******9998887777766 PP

>> PF11795.3  Uncharacterized protein conserved in bacteria N-term (DUF3322)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.96   1.9e+03      25      51 ..      69      95 ..      49     120 .. 0.64
   2 ?   -1.1   0.3      0.55   1.1e+03      36      61 ..     117     142 ..      83     153 .. 0.69
   3 ?   10.6   0.3   0.00014      0.28      69     159 ..     180     266 ..     160     270 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.96
   PF11795.3 25 eeawPlrlplkkPtaaelsedfaavre 51
                ++a Pl+  +++ t a+++ + +a  +
  MMETSP1325-20131115|9380_1 69 AAAEPLSAEAQPQTPAQAKVQAQALTQ 95
                556666666666666666655555444 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.55
   PF11795.3  36 kPtaaelsedfaavrewiealrawsr 61 
                   taa++++  a+vr+  ++ +++s+
  MMETSP1325-20131115|9380_1 117 MATAAAAAAAAATVRQTATSASSVSS 142
                 34556666666666666666655555 PP

  == domain 3    score: 10.6 bits;  conditional E-value: 0.00014
   PF11795.3  69 wrkvnhrvlgknelPervvidsleealrllgktkearrlkellaqlrarepalvawldkrplral.elaalwkdedferllavlewlrahpa 159
                  r++  r+ g+ ++  ++vi+   ealr+++  ++a  + + l+++r+   +  + +++  l+ l e+aa w     +++l+v++ +r+h +
  MMETSP1325-20131115|9380_1 180 CRTLDVRQPGSERVERSMVIRGFVEALRACQSARQAGAVMDVLSVMREYGLRPNRQCFTIALQTLgEEAANW-----QLVLDVVDMMREHGR 266
                 577778888999999999*******************************99999999999999999******.....***********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       839  (0.0613663); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.34s 00:00:01.01 Elapsed: 00:00:00.52
# Mc/sec: 1391.73
//
Query:       MMETSP1325-20131115|9378_1  [L=788]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-08   30.8   0.3    0.00012   20.9   0.0    2.6  2  PF00036.27 EF hand
    3.2e-06   26.5   0.1      7e-06   25.4   0.0    1.6  1  PF13833.1  EF-hand domain pair
    7.6e-06   25.8   0.2      2e-05   24.5   0.1    1.7  1  PF13499.1  EF-hand domain pair
    1.1e-05   24.7   0.2     0.0036   16.9   0.0    2.5  2  PF13405.1  EF-hand domain
    0.00049   19.2   0.3      0.095   11.9   0.0    2.5  2  PF13202.1  EF hand
     0.0059   16.0   4.8      0.012   15.1   0.1    3.1  3  PF00612.22 IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   5.3e-08   0.00012       9      29 .]     197     217 ..     195     217 .. 0.93
   2 !    7.6   0.0     0.001       2.3       5      23 ..     230     248 ..     228     252 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 5.3e-08
                 HCTTTSSEBEHHHHHHHHHHH CS
  PF00036.27   9 fDkDgdGkIsfeEfkealkkl 29 
                 +D Dg+G I+ eEfk++l+kl
  MMETSP1325-20131115|9378_1 197 YDEDGNGVIDHEEFKHILTKL 217
                 9*****************986 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.001
                 HHHHHCTTTSSEBEHHHHH CS
  PF00036.27   5 aFkefDkDgdGkIsfeEfk 23 
                 + +e+Dk++dG + ++E  
  MMETSP1325-20131115|9378_1 230 VLAELDKNNDGIVALDEIE 248
                 5789********9999975 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   3.1e-09     7e-06       2      46 ..     202     246 ..     201     252 .. 0.94

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 3.1e-09
   PF13833.1   2 kGlItreeLkral.allglkglseeevdilfrefDtdgdGkisfeE 46 
                 +G+I+ ee+k++l +l g++ l++ +  +++ e+D ++dG++ ++E
  MMETSP1325-20131115|9378_1 202 NGVIDHEEFKHILtKLPGIE-LTAVQNKTVLAELDKNNDGIVALDE 246
                 8************8888***.*********************9998 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.1   8.6e-09     2e-05       8      64 ..     196     249 ..     195     251 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 8.6e-09
   PF13499.1   8 llDkdgdgyldkeeLlrllkhl.gselsdeevrevldyifkelDkngdGvlsfeEflq 64 
                 ++D dg+g +d ee++++l++l g el+  + ++v    ++elDkn+dG + ++E ++
  MMETSP1325-20131115|9378_1 196 TYDEDGNGVIDHEEFKHILTKLpGIELTAVQNKTV----LAELDKNNDGIVALDEIEK 249
                 79*****************9983344448888888....****************976 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.6e-06    0.0036       8      28 ..     196     216 ..     195     222 .. 0.90
   2 !    5.1   0.0    0.0099        23       8      26 ..     233     251 ..     228     253 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.6e-06
                 CC-------B---HHHHHHH. CS
   PF13405.1   8 lfDkdgdGkidaeELrdaLrk 28 
                  +D dg+G id eE++++L+k
  MMETSP1325-20131115|9378_1 196 TYDEDGNGVIDHEEFKHILTK 216
                 59*****************94 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0099
                 CC-------B---HHHHHH CS
   PF13405.1   8 lfDkdgdGkidaeELrdaL 26 
                  +Dk++dG + ++E+ + +
  MMETSP1325-20131115|9378_1 233 ELDKNNDGIVALDEIEKQM 251
                 79************98765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   4.1e-05     0.095       8      23 ..     197     212 ..     196     214 .. 0.89
   2 !    4.7   0.0    0.0078        18       4      16 ..     230     242 ..     226     252 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.1e-05
                 H--S----B-HHHHHH CS
   PF13202.1   8 fDlNgDGkIsreELkr 23 
                 +D +g G I++eE+k 
  MMETSP1325-20131115|9378_1 197 YDEDGNGVIDHEEFKH 212
                 699***********97 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0078
                 HHHHH--S----B CS
   PF13202.1   4 tFrafDlNgDGkI 16 
                 ++ ++D+N+DG +
  MMETSP1325-20131115|9378_1 230 VLAELDKNNDGIV 242
                 67789******76 PP

>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   1.1      0.26   5.8e+02       4      19 ..     335     350 ..     334     352 .. 0.83
   2 !   15.1   0.1   5.1e-06     0.012       2      20 ..     373     391 ..     372     392 .. 0.91
   3 ?   -3.6   0.0       5.2   1.2e+04       3      10 ..     396     403 ..     395     403 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHCH CS
  PF00612.22   4 aikIQaawRgylaRkr 19 
                 a ++Q ++R+++ R+ 
  MMETSP1325-20131115|9378_1 335 ARMMQGMFRRWQGRQL 350
                 568999******9986 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 5.1e-06
                 HHHHHHHHHHHHHHHHCHC CS
  PF00612.22   2 kaaikIQaawRgylaRkry 20 
                 +aa+k+Qa++Rg l R+  
  MMETSP1325-20131115|9378_1 373 EAACKLQAVYRGRLERRSM 391
                 69**************976 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 5.2
                 HHHHHHHH CS
  PF00612.22   3 aaikIQaa 10 
                 + +++Qa+
  MMETSP1325-20131115|9378_1 396 STTVLQAF 403
                 789***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (788 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1805  (0.132022); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.42u 0.38s 00:00:01.79 Elapsed: 00:00:00.70
# Mc/sec: 2697.61
//
Query:       MMETSP1325-20131115|9377_1  [L=910]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   28.4   0.0      2e-06   27.6   0.0    1.4  1  PF00307.26 Calponin homology (CH) domain
  ------ inclusion threshold ------
      0.018   14.7   0.0      0.056   13.1   0.0    1.8  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   2.9e-10     2e-06       2     105 ..      30     126 ..      29     130 .. 0.85

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 2.9e-10
                 HHHHHHHHHHHTTSTCTSSHS.HHHHHTCTSHHHHHHHHHHSTTSSSGGGSTCCSSSSHHHHHHHHHHHHHHHHHHCT-TTTS..-HHHHHTST-HHHHHHHHHHHH CS
  PF00307.26   2 dallrWinkvlekleqsrqve.nlskdlsDGvaLaallhkycpdlvdlediskclkesvadsleNlqlalefaeeklgvscvl..tledllysgnkknvlaflaeLf 105
                 ++++ W++ vl++       e  ++++l+DGv L++  + ++p+ +   ++  +++  ++ +++N++ ++ +++  lg+  +   ++ dl++ ++ ++v+++l ++ 
  MMETSP1325-20131115|9377_1  30 EEITAWMEAVLGEP-----FEgAFTDELKDGVKLCEFANCIRPNII--PKV--KRSGIAFIQMQNISSFIAAMKA-LGMDALQcfDTIDLYKAKDLPKVVQTLYTFG 126
                 57899*****9766.....4537899******************76..555..3333679***********9999.****99999*****9999999*999998875 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   8.1e-06     0.056       5      41 ..      58      96 ..      57      99 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 8.1e-06
   PF13893.1  5 fskfGkverikifrkk..ggqAfvefdtveaArkakeyl 41
                ++ f +++r  i +k   +g Af+++++++++  a+++l
  MMETSP1325-20131115|9377_1 58 LCEFANCIRPNIIPKVkrSGIAFIQMQNISSFIAAMKAL 96
                689***********99877****************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (910 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2208  (0.161498); expected 273.4 (0.02)
Passed bias filter:                      445  (0.0325483); expected 273.4 (0.02)
Passed Vit filter:                       237  (0.0173347); expected 13.7 (0.001)
Passed Fwd filter:                        80  (0.00585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 4.41u 0.53s 00:00:04.94 Elapsed: 00:00:01.72
# Mc/sec: 1267.84
//
Query:       MMETSP1325-20131115|9381_1  [L=389]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.38s 00:00:01.08 Elapsed: 00:00:00.48
# Mc/sec: 1942.05
//
Query:       MMETSP1325-20131115|9383_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 469.49
//
Query:       MMETSP1325-20131115|9384_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.49
# Mc/sec: 317.88
//
Query:       MMETSP1325-20131115|9382_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-09   36.0   0.0      8e-09   35.2   0.0    1.4  1  PF09066.5  Beta2-adaptin appendage, C-terminal sub-domain
     0.0061   16.7   0.9      0.012   15.8   0.7    1.5  1  PF02883.15 Adaptin C-terminal domain
  ------ inclusion threshold ------
       0.15   12.0   0.0        2.2    8.3   0.0    2.1  2  PF09478.5  Carbohydrate binding domain CBM49


Domain annotation for each model (and alignments):
>> PF09066.5  Beta2-adaptin appendage, C-terminal sub-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.0   1.8e-12     8e-09       7     113 ..     176     283 ..     171     284 .. 0.85

  Alignments for each domain:
  == domain 1    score: 35.2 bits;  conditional E-value: 1.8e-12
   PF09066.5   7 ldreeFeetWqslpesnkqeltlqlq.akvlnpesikekLqrnni...ftiAkgeeedqqkllyfsakttngvlvlieliintgsskvqisvKsknpevaqlflqlvekiL 113
                 ld   F+++W ++++    + t++ + a+  +++++  kL+  ++   + +A+g ++   + +yfsa+t +++ vl+el +++g + ++++v++++++ a+++  ++e +L
  MMETSP1325-20131115|9382_1 176 LDSPAFQAKWGTIDPASAASSTVT-DmACAATADAAAAKLAGLGMplaVRVAAGADG--GERAYFSAMTMTNCTVLLELAFKAGFNGMKVTVRCDQADKAEVAKAAIEAML 283
                 67778********77764555444.459****************9333446777776..5*************************************99999999999988 PP

>> PF02883.15  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.7   2.6e-06     0.012      22     102 ..      73     156 ..      65     164 .. 0.76

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.6e-06
                 SSSEEEEEEEEEE-SSS-EEEEEEEEE--TTSEE-----S-S-B--.....----EE---EES...--------EEEEEEEEEEETT CS
  PF02883.15  22 rpnqiritlfftNkssqpitnfsfqaavpkslklqlqppssttlpp.....gtqiqqvllven.refsepakkklrlrvrisytvgg 102
                  ++ + +++  tN+ ++pi++f  q+   ++ ++ l p   +   p     g++   ++ ++   +   p++++++l+v+i++++++
  MMETSP1325-20131115|9382_1  73 TGGALSLEMDVTNQGQTPIQQFAVQL---NKSTFGLAPTNANIQFPapiapGATGSFSVPMTVtPSMVAPGPASTVLQVAIKNMHTQ 156
                 5778999*******************...9999999999665544458887555555555555557777899999999999999863 PP

>> PF09478.5  Carbohydrate binding domain CBM49
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00049       2.2      21      61 ..      79     115 ..      72     127 .. 0.81
   2 ?    1.4   0.0     0.069   3.2e+02      19      38 ..     144     163 ..     130     168 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00049
   PF09478.5  21 yevtvtNnssktikslklsisnlageiWgvekvsknsyslp 61 
                  e+ vtN+++++i+++ ++++   ++ +g+   ++ + ++p
  MMETSP1325-20131115|9382_1  79 LEMDVTNQGQTPIQQFAVQLN---KSTFGLAP-TNANIQFP 115
                 5789************99988...67899988.67777777 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.069
   PF09478.5  19 yqyevtvtNnssktikslkl 38 
                 ++ +v ++N  ++t+  +++
  MMETSP1325-20131115|9382_1 144 TVLQVAIKNMHTQTVFYFQF 163
                 567999*********99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 1293.13
//
Query:       MMETSP1325-20131115|9386_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-20   73.1   1.0    2.1e-20   72.3   0.0    1.8  2  PF03129.15 Anticodon binding domain
    2.2e-19   69.0   2.3    5.3e-19   67.8   1.6    1.7  1  PF09180.6  Prolyl-tRNA synthetase, C-terminal


Domain annotation for each model (and alignments):
>> PF03129.15  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.0   3.1e-24   2.1e-20       1      89 [.      39     131 ..      39     136 .. 0.94
   2 ?   -1.5   0.1      0.32   2.2e+03      60      76 ..     181     196 ..     179     214 .. 0.68

  Alignments for each domain:
  == domain 1    score: 72.3 bits;  conditional E-value: 3.1e-24
                 SEEEEESSSS...HHHHHHHHHHHHHHHHC----EEE--.SSS----HHHHHHH----EEEEE-HHHHCTTEEEEEETTTTBEEEEETTTHHH CS
  PF03129.15   1 qvvviplgek...aeeledyakklaeeLreagirveldd.rsesigkklrradllgipfavvvGekelekgtvtvrdrdtgeqervsleelve 89 
                 qvv++p+ +k   ++ + +y+k++a+ L++agir++ d  ++ ++g+k+++++l+g+p++++vG++e+e ++v   +r++g +e+ +l+ l++
  MMETSP1325-20131115|9386_1  39 QVVIVPIPKKgveRDVMDNYCKEVAKTLKAAGIRTKADLrENYNPGWKYNHWELKGVPIRIEVGAQEVEGKKVMMVQRMDGVKEECTLDGLAA 131
                 9********9*9877677**************************************************77999999999****9999998876 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 0.32
                 -HHHHCTTEEEEEETTT CS
  PF03129.15  60 Gekelekgtvtvrdrdt 76 
                 +e+e e++ v+ r+r++
  MMETSP1325-20131115|9386_1 181 DEEE-EEDEVKKRSREE 196
                 4455.478888888843 PP

>> PF09180.6  Prolyl-tRNA synthetase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   1.6   7.7e-23   5.3e-19       1      68 []     162     255 .]     162     255 .] 0.99

  Alignments for each domain:
  == domain 1    score: 67.8 bits;  conditional E-value: 7.7e-23
   PF09180.6   1 leefkkalekkgfvlapwcgdeeceekikeet..................gatirciPld........eeekeggkCilcgkpAkkwvlfArsY 68 
                 ++ef++al++++++l+p+c +ee e+++k+++                  +a+++c P+d         e++++ +C+ +gkpAk wvl++rsY
  MMETSP1325-20131115|9386_1 162 WSEFVPALNEGCMCLTPFCDEEEEEDEVKKRSreealdgdeeeercatsvAAKTLCKPYDqpgcrindLEDPTTLTCFATGKPAKAWVLWGRSY 255
                 89****************************************************************9999************************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       602  (0.0440316); expected 273.4 (0.02)
Passed bias filter:                      480  (0.0351083); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.39s 00:00:00.99 Elapsed: 00:00:00.59
# Mc/sec: 1035.71
//
Query:       MMETSP1325-20131115|9388_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|9390_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 483.71
//
Query:       MMETSP1325-20131115|9391_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-09   36.8   0.1    2.9e-09   36.3   0.1    1.3  1  PF00400.27 WD domain, G-beta repeat
     0.0079   15.4   0.4     0.0096   15.1   0.3    1.1  1  PF04012.7  PspA/IM30 family
  ------ inclusion threshold ------
      0.029   13.9   0.5      0.044   13.3   0.4    1.3  1  PF00831.18 Ribosomal L29 protein
      0.078   11.6   0.0      0.085   11.5   0.0    1.1  1  PF06697.7  Protein of unknown function (DUF1191)
       0.11   11.2   0.2       0.16   10.5   0.1    1.2  1  PF06050.8  2-hydroxyglutaryl-CoA dehydratase, D-component


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.1     1e-12   2.9e-09       2      39 .]      55      92 ..      54      92 .. 0.98

  Alignments for each domain:
  == domain 1    score: 36.3 bits;  conditional E-value: 1e-12
                EEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
  PF00400.27  2 eckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                +ck++l+gH + V+++ ++ d+ +++s+S Dg++ +W+
  MMETSP1325-20131115|9391_1 55 TCKKILKGHFGKVYAMHWAGDSERVVSASQDGKLIIWN 92
                7************************************7 PP

>> PF04012.7  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.3   3.5e-06    0.0096     120     171 ..       3      55 ..       1      61 [. 0.92

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3.5e-06
   PF04012.7 120 qlealetkieelkakkellkarekaakaqeavqkslgkls.tesatdslerie 171
                 ++e+   k++++ka+ ++lka+++ +k ++a  ++lg+++ ++satd  ++i 
  MMETSP1325-20131115|9391_1   3 SVEEIGEKVKAKKAELKTLKAQLEGIKGEKADIEHLGEADgAGSATDLVQKIT 55 
                 5788889****************************************999886 PP

>> PF00831.18  Ribosomal L29 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.4   1.6e-05     0.044       6      30 ..       1      25 [.       1      32 [. 0.94

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.6e-05
                TSHHHHHHHHHHCHHHHHHHHHHHH CS
  PF00831.18  6 elsdeeLkeklkelkkeLfnLRfqk 30
                ++s+ee+ ek+k+ k+eL +L+ q 
  MMETSP1325-20131115|9391_1  1 NMSVEEIGEKVKAKKAELKTLKAQL 25
                79********************996 PP

>> PF06697.7  Protein of unknown function (DUF1191)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.1e-05     0.085     163     218 ..      41      96 ..      20      99 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.1e-05
   PF06697.7 163 lngeatiseqvksnvCatsrqGhyalvvkseakkpkvepegesekeklsrWkvvgs 218
                 ++g  ++++ v++ +C+   +Gh++ v   +   ++    + s+++kl  W ++ +
  MMETSP1325-20131115|9391_1  41 ADGAGSATDLVQKITCKKILKGHFGKVYAMHWAGDSERVVSASQDGKLIIWNAITT 96 
                 5777778999******************9999999888888999*******97765 PP

>> PF06050.8  2-hydroxyglutaryl-CoA dehydratase, D-component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1     6e-05      0.16      99     131 ..       9      41 ..       2      42 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 6e-05
                 ---HHHHHHH---HHHHHHH------HHHHHHH CS
   PF06050.8  99 ealdyfakqlkklipqleeitgrkideeaLgea 131
                 e+++  +++lk l++qle i g+k d e Lgea
  MMETSP1325-20131115|9391_1   9 EKVKAKKAELKTLKAQLEGIKGEKADIEHLGEA 41 
                 67777789**********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       684  (0.0500293); expected 273.4 (0.02)
Passed bias filter:                      622  (0.0454944); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.43s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 443.77
//
Query:       MMETSP1325-20131115|9392_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   19.7   9.9    0.00027   19.6   6.9    1.2  1  PF10446.4  Protein of unknown function (DUF2457)
     0.0084   14.0   5.8     0.0087   14.0   4.0    1.1  1  PF02724.9  CDC45-like protein
     0.0087   15.5  10.8     0.0099   15.3   7.5    1.1  1  PF04546.8  Sigma-70, non-essential region
  ------ inclusion threshold ------
      0.011   14.1  10.1      0.011   14.1   7.0    1.1  1  PF03344.10 Daxx Family
      0.015   14.9   3.5      0.021   14.4   2.5    1.3  1  PF08595.6  RXT2-like, N-terminal
       0.12   12.8  18.5       0.25   11.8  12.8    1.6  1  PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
       0.15   10.1   6.4       0.17    9.9   4.4    1.0  1  PF08553.5  VID27 cytoplasmic protein
       0.19   10.8  11.1       0.21   10.7   7.7    1.1  1  PF05285.7  SDA1
       0.39    9.5   8.3       0.48    9.2   5.7    1.1  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
       0.52    9.1   3.4       0.64    8.8   2.4    1.1  1  PF10846.3  Protein of unknown function (DUF2722)
        0.6    8.6   5.9        0.7    8.4   4.1    1.1  1  PF04712.7  Radial spokehead-like protein
       0.63   10.2  18.1        1.3    9.2  12.6    1.6  1  PF09026.5  Centromere protein B dimerisation domain
       0.76    7.4   7.1       0.98    7.0   4.9    1.1  1  PF05642.6  Sporozoite P67 surface antigen
       0.93    8.4  15.9        1.2    8.1  11.0    1.1  1  PF06213.7  Cobalamin biosynthesis protein CobT
          1    8.9  14.4        1.5    8.4  10.0    1.2  1  PF04050.9  Up-frameshift suppressor 2
        1.1    8.1  12.0        1.3    7.8   8.3    1.1  1  PF09073.5  BUD22
        1.2    7.3  11.0        1.3    7.1   7.7    1.1  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
        1.2    8.2   9.5        1.7    7.8   6.6    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
        1.3    8.0  15.0        1.9    7.5  10.4    1.2  1  PF06524.7  NOA36 protein
        2.4    7.7   7.8        3.6    7.1   5.4    1.4  1  PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
        2.8    6.6   5.6        3.6    6.2   3.9    1.1  1  PF04514.7  Bluetongue virus non-structural protein NS2
        3.5    5.4   7.7          4    5.3   5.3    1.1  1  PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
        5.5    6.3  21.8         11    5.4  15.1    1.4  1  PF03066.10 Nucleoplasmin
        5.8    6.2  17.2          8    5.8  11.9    1.1  1  PF09184.6  PPP4R2
        5.9    5.4  11.4        6.7    5.2   7.9    1.1  1  PF03985.8  Paf1
        9.4    4.3  11.8         12    4.0   8.2    1.1  1  PF00183.13 Hsp90 protein


Domain annotation for each model (and alignments):
>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   6.9   5.1e-07   0.00027      45      93 ..      91     135 ..      76     195 .. 0.67

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 5.1e-07
   PF10446.4  45 aeeealeeedededdeeddddeDeddddddddeDdedde.lddddstlad 93 
                  eeea+++e     +e++dd++Ded+++d+  eD+e+d  l  +d+ l+ 
  MMETSP1325-20131115|9392_1  91 DEEEAEKDE-----EEDEDDEDDEDEEEDEHGEDEEHDFsLTSEDAILHR 135
                 233333333.....222233334444445555556666555555555555 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   4.0   1.6e-05    0.0087     124     181 ..      86     138 ..      48     195 .. 0.56

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.6e-05
   PF02724.9 124 lvemkeeeeeesdedsdseddeeeeessasekrksesdedeedd.ddeededeeqrkrs 181
                 l  +++eee e+de++d++d+++e+e+++++       edee+d + + ++ + +r rs
  MMETSP1325-20131115|9392_1  86 LAASDDEEEAEKDEEEDEDDEDDEDEEEDEH------GEDEEHDfSLTSEDAILHRTRS 138
                 3233333332222222222222222222222......2233333033333334444444 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   7.5   1.9e-05    0.0099      28      98 ..      82     150 ..      59     170 .. 0.52

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.9e-05
   PF04546.8  28 Gfidpaaaaeeeeaeeeseddeeeeeddddddededeeeeseeadegpdpeear.erFaelrkqyeklekal 98 
                 G+++   aa+++ +ee+++d+ee+e+d+dd+de+ede+ e+ee d + + e+a+  r + l+ + ++ ++ +
  MMETSP1325-20131115|9392_1  82 GIVEL--AASDD-EEEAEKDEEEDEDDEDDEDEEEDEHGEDEEHDFSLTSEDAIlHRTRSLASLRASGQDLI 150
                 45555..22222.22222222222222244444455444677777666666664144555555555555555 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   7.0   2.1e-05     0.011     438     487 ..      88     125 ..      41     166 .. 0.62

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.1e-05
  PF03344.10 438 eseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedle 487
                  s++ee+aek+e+e++            ++e++e+eee+e  ++ee+d  
  MMETSP1325-20131115|9392_1  88 ASDDEEEAEKDEEEDE------------DDEDDEDEEEDEHGEDEEHDFS 125
                 2333333333333333............2333333333333333443333 PP

>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   2.5   4.1e-05     0.021      56      88 ..      95     127 ..      68     174 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 4.1e-05
   PF08595.6  56 dedenelddededdeeeededeeeaeenplkki 88 
                  e+++e+d++dedde+ee++++ e+ee+ ++ +
  MMETSP1325-20131115|9392_1  95 AEKDEEEDEDDEDDEDEEEDEHGEDEEHDFSLT 127
                 233334444555555556666666666665554 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  12.8   0.00047      0.25       3      42 ..      92     135 ..      87     155 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00047
   PF11942.3   3 dtEAevddeeeEee.eeedeeeelseeaefieea...eddrrhr 42 
                 ++EAe d+ee+E++ ++edeee++  e+e+++     ed  +hr
  MMETSP1325-20131115|9392_1  92 EEEAEKDEEEDEDDeDDEDEEEDEHGEDEEHDFSltsEDAILHR 135
                 589****9999999788888887777776665448765555555 PP

>> PF08553.5  VID27 cytoplasmic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.4   0.00031      0.17     380     418 ..      88     122 ..      37     142 .. 0.54

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00031
   PF08553.5 380 eiedeeeeeeaeeeeeeeeeeeedeeegeskeevddeey 418
                  ++dee   eae++eee+e++e+de+ +e+ e+ +dee+
  MMETSP1325-20131115|9392_1  88 ASDDEE---EAEKDEEEDEDDEDDED-EEEDEHGEDEEH 122
                 233322...22222222222222222.222222333332 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   7.7   0.00041      0.21     105     157 ..      89     123 ..      43     167 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00041
   PF05285.7 105 sdeededeDeegewvdvesdeeeessDsedeeeeseeeeeeeesekkkkeesd 157
                 sd+e+e+e +e+e +d+e+d                  e+eee+e++++ee+d
  MMETSP1325-20131115|9392_1  89 SDDEEEAEKDEEEDEDDEDD------------------EDEEEDEHGEDEEHD 123
                 11111111111222222222..................122222222222222 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.7   0.00092      0.48      46      77 ..      87     123 ..      59     155 .. 0.48

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00092
  PF03896.11  46 vdedeedeaeveedekteaeeeedee.....eagevk 77 
                 +++d+e+eae++e+e ++ e++edee     e++e +
  MMETSP1325-20131115|9392_1  87 AASDDEEEAEKDEEEDEDDEDDEDEEedehgEDEEHD 123
                 2222222222222222221111111100001222222 PP

>> PF10846.3  Protein of unknown function (DUF2722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.4    0.0012      0.64     329     384 ..      74     151 ..      67     180 .. 0.50

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0012
   PF10846.3 329 idlnsas.eilqpsikfensaiasqekeddddddddekerkkeeeedkekdsikdd.....................d 384
                  d  sas  i++ + +  +++  + e+ed+dd+dd+ +e+++++e+++++ s  ++                      
  MMETSP1325-20131115|9392_1  74 CDAESASgGIVELAASDDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEEHDFSLTSEdailhrtrslaslrasgqdliA 151
                 566666655555455444444444444444444444444444444433333333323666666666555554433333 PP

>> PF04712.7  Radial spokehead-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.1    0.0013       0.7     357     385 ..      91     119 ..      79     162 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0013
   PF04712.7 357 keeeeeeeeeedeeeeeeeeeeepEegpe 385
                  eee e++eeede+ e++e+eee E+g +
  MMETSP1325-20131115|9392_1  91 DEEEAEKDEEEDEDDEDDEDEEEDEHGED 119
                 33344444444444444444444444432 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2  12.6    0.0024       1.3      15      39 ..      91     115 ..      81     141 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0024
   PF09026.5  15 dseeeeedeeedeededeedeeedd 39 
                 d ee e+deeede+ded+edeeed+
  MMETSP1325-20131115|9392_1  91 DEEEAEKDEEEDEDDEDDEDEEEDE 115
                 2333344455555444444444443 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.9    0.0019      0.98      97     170 ..      93     165 ..      75     178 .. 0.55

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0019
   PF05642.6  97 selqsdteineddkGskedseedddeeeeednkstsskdgkgskkaqpgvssssgsttsqtdlstklsqtglga 170
                  e ++d e +e d+ ++ed+eed++ e+ee + s +s d    +    +   +sg+  +   + ++ sq++l a
  MMETSP1325-20131115|9392_1  93 EEAEKDEEEDE-DDEDDEDEEEDEHGEDEEHDFSLTSEDAILHRTRSLASLRASGQDLIASRTISSSSQSELDA 165
                 22222222222.22233333333334444555555555554433334444556677777777777777777765 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  11.0    0.0023       1.2     213     252 ..      89     129 ..      66     147 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0023
   PF06213.7 213 gdeeessdseekrd.edddkedeeddaseeeesgdsdslsk 252
                 +d+ee+++++e++d +d+d+edee+d+ +e+e+ d + +s+
  MMETSP1325-20131115|9392_1  89 SDDEEEAEKDEEEDeDDEDDEDEEEDEHGEDEEHDFSLTSE 129
                 34444444444433255555555555555555555444444 PP

>> PF04050.9  Up-frameshift suppressor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  10.0    0.0028       1.5      12      55 ..      90     130 ..      74     145 .. 0.49

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0028
   PF04050.9  12 edeelpeededdessdeeeeeeedeeedeeseseeeeievtrke 55 
                 +dee  e    de++de++e++edeeede+ e+ee  + +t+++
  MMETSP1325-20131115|9392_1  90 DDEEEAE---KDEEEDEDDEDDEDEEEDEHGEDEEHDFSLTSED 130
                 2222222...2222222233333333344444444444444433 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   8.3    0.0025       1.3     168     204 ..      88     125 ..      62     167 .. 0.59

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0025
   PF09073.5 168 edkdeeessesedssddeeseeddsdsdeeeesdse.d 204
                 +++deee+++ e++++d+e++ed++++++ e+++ +  
  MMETSP1325-20131115|9392_1  88 ASDDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEEHDfS 125
                 23333333333333333333333333333333332232 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   7.7    0.0025       1.3     305     336 ..      90     121 ..      66     170 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0025
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF05793.7 305 seEeeekkeieqdedeeekeeekkeeegklsk 336
                 ++Eee+ k++e+ded+e++e+e+++e g+ ++
  MMETSP1325-20131115|9392_1  90 DDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEE 121
                 33333333333333333333333333322222 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   6.6    0.0031       1.7      74     108 ..      88     122 ..      61     136 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0031
   PF07423.6  74 kdedkeddsesekkdeeseeeeeeekekkeeesee 108
                 +++d+e+++++e++de+ e++e+ee++++ e++e+
  MMETSP1325-20131115|9392_1  88 ASDDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEEH 122
                 33333332222222222222222222222222222 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  10.4    0.0036       1.9     262     305 ..      76     120 ..      58     130 .. 0.53

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0036
   PF06524.7 262 gdaksvnygy..esdddeeesaedydeeededddddeeedetsene 305
                 ++ +s++  +   sdd+ee +++++++e+d +dd+deeede  e+e
  MMETSP1325-20131115|9392_1  76 AESASGGIVElaASDDEEEAEKDEEEDEDD-EDDEDEEEDEHGEDE 120
                 334444433311345555555555555444.444555555544333 PP

>> PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   5.4    0.0069       3.6       8      36 ..      93     121 ..      82     170 .. 0.51

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0069
   PF05320.7   8 edyesdddeeeeyeeeeedeedaesless 36 
                 e++e+d++e+e+ e++e++eed+++++++
  MMETSP1325-20131115|9392_1  93 EEAEKDEEEDEDDEDDEDEEEDEHGEDEE 121
                 22222222222222222222222222222 PP

>> PF04514.7  Bluetongue virus non-structural protein NS2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   3.9    0.0068       3.6     243     272 ..      93     122 ..      72     146 .. 0.57

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0068
   PF04514.7 243 kkeqeeeekvetesddedeegedseeeetk 272
                 ++ ++ ee+ e+++ddedee+++++e+e +
  MMETSP1325-20131115|9392_1  93 EEAEKDEEEDEDDEDDEDEEEDEHGEDEEH 122
                 222222233333333333333333344433 PP

>> PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.3    0.0076         4     222     268 ..      90     130 ..      62     170 .. 0.47

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0076
   PF05327.6 222 lddlddeeeeellaeeeeeeeeelfdlddddseeesvesedeedee........a 268
                  d+ + e++ee+++++e++e+ee ++  +d+              e         
  MMETSP1325-20131115|9392_1  90 DDEEEAEKDEEEDEDDEDDEDEEEDEHGEDE--------------EhdfsltseD 130
                 1111111111111111111111111111111..............1122333330 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  15.1      0.02        11     107     142 ..      86     121 ..      79     126 .. 0.63

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.02
                 ...........----XXXXXXXXXXXXXXXXXXXXX CS
  PF03066.10 107 valeedesldeeddeedeeeeddeedddeeeeeeee 142
                 +a+ +de+++e+d+eede++edde+++++e+ e+ee
  MMETSP1325-20131115|9392_1  86 LAASDDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEE 121
                 455666776767777777777666666666555554 PP

>> PF09184.6  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  11.9     0.015         8     238     283 ..      77     122 ..      54     125 .. 0.76

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.015
   PF09184.6 238 deakdsdvknkkaddeedddedsdyieekelkedeeedeteeeeee 283
                 ++a ++ v+   +ddee+ ++d+++ e++e++edeeede  e+ee 
  MMETSP1325-20131115|9392_1  77 ESASGGIVELAASDDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEEH 122
                 4455566777778888888888888888888888888888888875 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   7.9     0.013       6.7     375     407 ..      90     122 ..      75     162 .. 0.54

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.013
   PF03985.8 375 edeeeeeeqrseeeeeeeeedeeeeeseeeeel 407
                 +deee e++++e+e+ e +edeee+e+ e+ee 
  MMETSP1325-20131115|9392_1  90 DDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEEH 122
                 222332222222222222222222222222221 PP

>> PF00183.13  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   8.2     0.023        12      35      69 ..      88     122 ..      80     141 .. 0.60

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.023
                 ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX. CS
  PF00183.13  35 vpdeeeeeekeekeeeeekeeeekkeeeeeeeeee 69 
                  +d+eee+ek+e+e+e+++++e+++e+e+ e+ee+
  MMETSP1325-20131115|9392_1  88 ASDDEEEAEKDEEEDEDDEDDEDEEEDEHGEDEEH 122
                 45566666555555555444444444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       875  (0.0639994); expected 273.4 (0.02)
Passed bias filter:                      585  (0.0427882); expected 273.4 (0.02)
Passed Vit filter:                       171  (0.0125073); expected 13.7 (0.001)
Passed Fwd filter:                        35  (0.00255998); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.74u 0.42s 00:00:01.15 Elapsed: 00:00:00.52
# Mc/sec: 953.93
//
Query:       MMETSP1325-20131115|9394_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 1006.47
//
Query:       MMETSP1325-20131115|9397_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|9398_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   20.7   0.6     0.0004   20.0   0.4    1.3  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.4   2.9e-08    0.0004       3      22 ..      66      85 ..      64      86 .. 0.80

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.9e-08
                -SEEE.E.E----EEEEETT CS
  PF00397.21  3 pgWeersddddGrvYYyNhe 22
                ++W++++d+++Gr Y+yN+e
  MMETSP1325-20131115|9398_1 66 DPWKQATDPSSGRAYWYNPE 85
                56**9996559*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 456.23
//
Query:       MMETSP1325-20131115|9399_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-06   25.3   0.0    9.9e-06   25.0   0.0    1.3  1  PF03764.13 Elongation factor G, domain IV


Domain annotation for each model (and alignments):
>> PF03764.13  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   7.2e-10   9.9e-06       8      64 ..      57     113 ..      39     119 .] 0.84

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 7.2e-10
                 --SS-EE.E-----------------EEEEEE------EEEE--------GGGHHHH CS
  PF03764.13   8 tigkdvkerekklkkqsggdgqyakvilriePlegggnefvdetkggqvpkefkeav 64 
                 +ig+d k+  ++++ ++++d   a+ +++++P+ +g+n++vd+t    v k+    v
  MMETSP1325-20131115|9399_1  57 SIGWDRKQLGEFFQSKYDWDLLAARSVWAFGPDLDGPNILVDDTLPSEVDKKLLAQV 113
                 46799***************************99**********8555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 581.97
//
Query:       MMETSP1325-20131115|9401_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|9400_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 644.02
//
Query:       MMETSP1325-20131115|9403_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-18   64.9   0.0    2.8e-16   59.0   0.0    2.0  2  PF00285.16 Citrate synthase


Domain annotation for each model (and alignments):
>> PF00285.16  Citrate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.0   0.00048       6.6       9      48 ..      25      63 ..      18      71 .. 0.74
   2 !   59.0   0.0   2.1e-20   2.8e-16     164     298 ..      66     200 ..      56     204 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.00048
                --SSEEE------EEE---BHHHHHH.H--HHHHHHHHH-- CS
  PF00285.16  9 eteissidgekgkllYrGydiedlae.kssfeevaylLltg 48
                 ++is+  ge+  l Y G++i ++      +  v+ lL++ 
  MMETSP1325-20131115|9403_1 25 ISSISDDRGEE--LKYAGMPISEVFSeDIGVGGVLSLLWFR 63
                44555554444..***********96477799999999975 PP

  == domain 2    score: 59.0 bits;  conditional E-value: 2.1e-20
                 ..-TTHHHHHHHHHHHS--SS-HH.HHHHHHHHTTT--HHHHH---------------TTTHHHHHHH-.--GGGHHHHHHHHHHHT---------S..-SS--HHHHHHHHHHHHH-TT...-HHHHHHHHHHHHHHH CS
  PF00285.16 164 pseeeaealdlalilhaDHglnaS.TftarvvaStlsdlysavsaaigaLkGplHGgAneevlkmleei.gseeeveeyiekaldkgerimGfGHrv..YkteDPRakilkelaeelaaekgddellelaekleevale 298
                   + +++ ++++l++ aDHg  +S ++ + v+a ++ dl+sa+++++ ++ Gp+ GgA  e+ +m+    ++  +  ++ +++ ++++ imG+GHr+  + + D R+ i+k++a++      ++e l++a  +e+++++
  MMETSP1325-20131115|9403_1  66 LPAYATKFIEMVLMVTADHGPAVSgAHNTIVAARAGKDLVSALVSGLLTI-GPRFGGALDEAARMMSGAvDKGMDPLSFTKEMRKQNKLIMGIGHRIksLDNPDMRVVIIKDFAQKHF---PSNECLNFALGVEQITTS 200
                 45667899***********999996899999999**************97.***************99857788999999999999999*******8557799***********7666...899*******99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 1067.94
//
Query:       MMETSP1325-20131115|9396_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-27   95.3   0.6    2.6e-27   95.1   0.4    1.1  1  PF00241.15 Cofilin/tropomyosin-type actin-binding protein


Domain annotation for each model (and alignments):
>> PF00241.15  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.1   0.4   1.9e-31   2.6e-27       2     127 .]      43     170 ..      42     170 .. 0.93

  Alignments for each domain:
  == domain 1    score: 95.1 bits;  conditional E-value: 1.9e-31
                 CHHHCCCCHCC---.ECEEEEEE-TTSSSEEEEEE...E-S-HCCCCCCTS-TTS-EEEEEEEEEEBS.S-EEEEEEEEEE--TTS-HHHCHHHHHCCHHHHHHH----EEEEES-GGGGSHHHHCHHHH CS
  PF00241.15   2 elkesfqelkkrkk.kryiifkidknkkkivveqvg..etgdsydelveelkerecrYavldveytee.eskkskivfvswcpdgApvkkkmlyASskdalkkslkgikvevqatdasdlseeelkeklk 127
                 e+ ++f ++k +++ + ++ fki+ +  ++v ++++   ++++yd  +e+l+e+ +rY v+d++y++  +   +ki+f++w+pd++++k+km y+++k+++k+++ gi+v+++ td s+++ ee+ ++++
  MMETSP1325-20131115|9396_1  43 EVAAKFTDFKLKRTdYMAMFFKIEGD--EVVEDESLhvPKSADYDAILEKLDESTPRYLVVDFNYETTdGRPADKIIFIAWIPDTCKIKDKMKYSGTKESVKSAFVGIAVNINGTDLSEVTAEEITAQCN 170
                 78899*******999*********98..7776766656899************************99867889****************************************************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 841.17
//
Query:       MMETSP1325-20131115|9407_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 738.08
//
Query:       MMETSP1325-20131115|9408_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-10   39.8   0.0    7.7e-10   39.0   0.0    1.4  1  PF08241.7  Methyltransferase domain
    7.4e-09   35.8   0.0      9e-09   35.6   0.0    1.1  1  PF08242.7  Methyltransferase domain
    2.9e-08   33.0   0.0    4.6e-08   32.3   0.0    1.3  1  PF01209.13 ubiE/COQ5 methyltransferase family
    5.1e-08   33.3   0.0      6e-08   33.1   0.0    1.0  1  PF12847.2  Methyltransferase domain
    8.5e-08   31.8   0.0    1.5e-07   31.0   0.0    1.4  1  PF13847.1  Methyltransferase domain
    1.2e-05   25.5   0.0    1.4e-05   25.2   0.0    1.1  1  PF13649.1  Methyltransferase domain
    3.4e-05   23.4   0.0    3.8e-05   23.3   0.0    1.0  1  PF13489.1  Methyltransferase domain
     0.0046   16.8   0.0      0.007   16.2   0.0    1.4  1  PF13659.1  Methyltransferase domain
  ------ inclusion threshold ------
      0.088   12.3   0.0       0.14   11.6   0.0    1.3  1  PF05148.10 Hypothetical methyltransferase


Domain annotation for each model (and alignments):
>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   5.1e-13   7.7e-10      18      92 ..      11     101 ..       1     102 [] 0.85

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 5.1e-13
   PF08241.7  18 paarvtgvDlseemlatakerlkeegle....lvvad...........aeelpfe.dnsfDvvvssevlehledpekalkeiaRvLkpgGl 92 
                  +++v+ +Dls+  l+ ak+r ++ ++     lv+ad           a  l+++  +s+D+v++s +l+ ++ +++al++++RvLk gG 
  MMETSP1325-20131115|9408_1  11 TGCKVYLLDLSPDLLEMAKTRVEKLDIAehcvLVEADittaygangkpAAGLDLPaLGSIDIVTCSYCLTMIPPWKEALEQMVRVLKVGGT 101
                 599**********************999***977777777777788886667666468*******************************96 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   5.9e-12     9e-09      14      98 ..       4     101 ..       1     102 [] 0.86

  Alignments for each domain:
  == domain 1    score: 35.6 bits;  conditional E-value: 5.9e-12
   PF08242.7  14 llekl..pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.............ssfDvvvasnvlhhlkdirevldnirklLkpgGv 98 
                 + e++   +++++ +D+sp+ +e ak ++ k +   ++++ l + d+ +  g              +s D+v++s +l  +++++e+l+++ ++Lk gG 
  MMETSP1325-20131115|9408_1   4 VVEHIkvTGCKVYLLDLSPDLLEMAKTRVEKLDI--AEHCVLVEADITTAYGAngkpaagldlpalGSIDIVTCSYCLTMIPPWKEALEQMVRVLKVGGT 101
                 566666679******************9999985..66777777776665555789******************************************95 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0     3e-11   4.6e-08      66     148 ..       5     101 ..       2     102 .] 0.79

  Alignments for each domain:
  == domain 1    score: 32.3 bits;  conditional E-value: 3e-11
  PF01209.13  66 sdsvgekg.kvvvlDinenmLkvgekklkeegki........nieflq.an...aeeLpfed.dsfDvvtvsfGlrnvtDklkaLkeayrvlkpGGr 148
                  ++++ +g kv +lD+++++L++++ ++++            +i     an   a  L+    +s D+vt s+ l  ++  ++aL+++ rvlk+GG+
  MMETSP1325-20131115|9408_1   5 VEHIKVTGcKVYLLDLSPDLLEMAKTRVEKLDIAehcvlveaDITTAYgANgkpAAGLDLPAlGSIDIVTCSYCLTMIPPWKEALEQMVRVLKVGGT 101
                 5677777779******************987665556667555544431342223457777789*******************************96 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0     4e-11     6e-08      24     106 ..      11     101 ..       4     102 .] 0.85

  Alignments for each domain:
  == domain 1    score: 33.1 bits;  conditional E-value: 4e-11
   PF12847.2  24 pgakvvgvDpseeslelarenaksldleeriellqgda.keelsller...............fDavllkgltldallal.deprrvlealpkllkpggr 106
                  g+kv+ +D+s++ le+a+ ++++ld++e++ l+++d+ +       +               +D+v+++  +l     + + ++++le++ + lk gg+
  MMETSP1325-20131115|9408_1  11 TGCKVYLLDLSPDLLEMAKTRVEKLDIAEHCVLVEADItTAYG----AngkpaagldlpalgsIDIVTCSY-CLT----MiPPWKEALEQMVRVLKVGGT 101
                 699*******************99**************53333....33345899****************.444....4466899**********9996 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   9.7e-11   1.5e-07      27     104 ..      11     100 ..       3     102 .] 0.91

  Alignments for each domain:
  == domain 1    score: 31.0 bits;  conditional E-value: 9.7e-11
   PF13847.1  27 pgakvvGiDiseeaielAkeraqklgfe.nveFiqgdiee.lekl.le.........esfDlvisnevlnaladpqkvlkeiervlkpgg 104
                 +g+kv+++D s++ +e+Ak+r++kl +   +   ++di+     +  +          s+D+v++   l  ++  +++l+++ rvlk gg
  MMETSP1325-20131115|9408_1  11 TGCKVYLLDLSPDLLEMAKTRVEKLDIAeHCVLVEADITTaYGANgKPaagldlpalGSIDIVTCSYCLTMIPPWKEALEQMVRVLKVGG 100
                 5899************************999999****99766665558888899999******************************99 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   9.5e-09   1.4e-05      26     101 .]      14     100 ..       5     100 .. 0.79

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 9.5e-09
   PF13649.1  26 rvigvDiseealelakerlsskgl..kvkfvqadaral............pfeegefdlvvcaglslehlspkqlealleeiarvlkpgG 101
                 +v+++D+s++ le ak+r+++ ++  +   v ad++                + g++d+v+c+++ l  + p  ++++le+++rvlk gG
  MMETSP1325-20131115|9408_1  14 KVYLLDLSPDLLEMAKTRVEKLDIaeHCVLVEADITTAygangkpaagldLPALGSIDIVTCSYC-LTMIPP--WKEALEQMVRVLKVGG 100
                 689****************997777666679999955435555544444436999********99.666554..88999*******9887 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   2.5e-08   3.8e-05      36     110 ..       4     100 ..       1     102 [] 0.72

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 2.5e-08
   PF13489.1  36 llellaengfdvtgvDpspaaigk.......................akqaqksqfdeedaaepag............kfdlivarevlehvpdpeellrqiaellkpgG 110
                 ++e+++  g++v+  D+sp + ++                       a+ a+             g            + d+++++++l  +p ++e+l+q+ + lk gG
  MMETSP1325-20131115|9408_1   4 VVEHIKVTGCKVYLLDLSPDLLEMaktrvekldiaehcvlveadittAYGAN-------------GkpaagldlpalgSIDIVTCSYCLTMIPPWKEALEQMVRVLKVGG 100
                 57788889*************9995555555555555544333333322222.............1233345556666*****************************999 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   4.6e-06     0.007      24     108 ..      13      99 ..       2     102 .] 0.73

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 4.6e-06
   PF13659.1  24 alllgvEldpraaalaarnlaraglaervrvrqgdlrdl...........aellragsfdlvvtnpPygpragaraalrdlydafleaaarllkpg 108
                  +++ ++l+p  +++a++++++ ++ae ++++++d++++           + l   gs d+v ++   +    +     +  +++le++ r+lk g
  MMETSP1325-20131115|9408_1  13 CKVYLLDLSPDLLEMAKTRVEKLDIAEHCVLVEADITTAygangkpaaglD-LPALGSIDIVTCSYCLT----MI----PPWKEALEQMVRVLKVG 99 
                 789*********************************998888888777652.22347888888754443....11....23455556666665555 PP

>> PF05148.10  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.5e-05      0.14     121     153 ..      68     101 ..      60     102 .] 0.82

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.5e-05
  PF05148.10 121 esvdvavf..clslmgtnladflkeanrvlkvGGl 153
                 +s+d++ +  cl+ m   +++ l+++ rvlkvGG 
  MMETSP1325-20131115|9408_1  68 GSIDIVTCsyCLT-MIPPWKEALEQMVRVLKVGGT 101
                 6899987522776.5678***************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 488.86
//
Query:       MMETSP1325-20131115|9405_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        8.1    5.4  30.5         10    5.0  21.1    1.1  1  PF09507.5 DNA polymerase subunit Cdc27


Domain annotation for each model (and alignments):
>> PF09507.5  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  21.1   0.00075        10     125     272 ..      18     163 ..      11     182 .. 0.72

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.00075
   PF09507.5 125 gkqagpivnpevkrregv.gssplaaeaskalkktangkaaskpsksiaksevksksakktqdssketktektekktsvkaasskkkaseksnamssffkkktkekkkkkeaseskvkeeseeesekedkaeedesaesle.keedekek 272
                  k+ag+ +++++   ++  +  + a++++++  ++a+g+a s+p+ +i+   ++++ +++t  ++k++++++t    +v+a++++k +++ + ++ +  ++++++k k + ++e+k ++e++++ ++ + + ++++++    +ee    +
  MMETSP1325-20131115|9405_1  18 AKAAGF-TDEQIAAYKAEqAAAADAPAPAEEAAPAADGEAPSDPAVTIKEGDSAEQDKAATILQNKQRQKAATA---KVEAKREEKREQDGAATKLQGIQRQKAAKAKVAAKREEKAAAEAAAAAPTAEGEADPAEEAAAApAEEAAAAP 163
                 344444.77777665544444444455555567888888899999999999***********999999999888...5666666666789999999999999999999999****99***888888888777777776665555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1506  (0.110152); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.40s 00:00:01.21 Elapsed: 00:00:00.55
# Mc/sec: 797.33
//
Query:       MMETSP1325-20131115|9410_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 235.20
//
Query:       MMETSP1325-20131115|9409_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 778.82
//
Query:       MMETSP1325-20131115|9411_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 365.76
//
Query:       MMETSP1325-20131115|9412_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 510.34
//
Query:       MMETSP1325-20131115|9413_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 306.20
//
Query:       MMETSP1325-20131115|9415_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.064   11.4   0.2       0.07   11.3   0.1    1.0  1  PF10712.4 NAD-specific glutamate dehydrogenase


Domain annotation for each model (and alignments):
>> PF10712.4  NAD-specific glutamate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   5.1e-06      0.07     266     298 ..       2      33 ..       1      35 [. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 5.1e-06
   PF10712.4 266 ldqvldqalelgagqldvevqalrtrvvgrDer 298
                 l++v+ ++le++ag+  ++v+a++ r    D r
  MMETSP1325-20131115|9415_1   2 LEEVHVELLEARAGEGLRHVNAVEDRL-DLDAR 33 
                 89******************9999988.66665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       78  (0.00570509); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.53
# Mc/sec: 162.77
//
Query:       MMETSP1325-20131115|9416_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|9414_1  [L=309]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-17   62.4   0.4      7e-17   61.7   0.3    1.3  1  PF00621.15 RhoGEF domain
    1.3e-16   60.1  12.2    2.8e-16   59.0   8.5    1.5  1  PF01363.16 FYVE zinc finger
    0.00047   20.2   0.0    0.00091   19.2   0.0    1.5  1  PF00169.24 PH domain
  ------ inclusion threshold ------
      0.054   12.5   0.0       0.48    9.4   0.0    2.0  2  PF09983.4  Uncharacterized protein conserved in bacteria C-term(DUF2220)


Domain annotation for each model (and alignments):
>> PF00621.15  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.3     2e-20     7e-17      98     180 .]       7      91 ..       2      91 .. 0.84

  Alignments for each domain:
  == domain 1    score: 61.7 bits;  conditional E-value: 2e-20
                 HHHHHHHHHH-HHHHHHHH..HHGGG.TT--HHHHCTHHHHHHHHHHHHHHHHHHT-..-.SHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF00621.15  98 lkllkelskknskfkkflkeceespecskldLeslLikPvqRlprYplLLkellkqt..p.edhpdyedlekaleaikevasqiNe 180
                 l+ ++ ++k+ + f++f++  e+s++ + ++L+slLi+P+qR++rY l L+++ k      +dhpd   le+al++ik+ as+iN+
  MMETSP1325-20131115|9414_1   7 LTFVSYAKKSRD-FAEFVDAGEASEQLKMQTLQSLLIMPIQRVLRYNLILQDMQKDLlkHnPDHPDVPLLEEALQKIKDSASHIND 91 
                 455555555555.***********9************************99876655421359**********************6 PP

>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   8.5   8.2e-20   2.8e-16       2      66 ..     232     294 ..     231     296 .. 0.94

  Alignments for each domain:
  == domain 1    score: 59.0 bits;  conditional E-value: 8.2e-20
  PF01363.16   2 kwvpdaeakkCeiCakkFsltrrrhhCrlCGkvvCskCsskrvekleeeaaeekevrvCkeClee 66 
                  w pd++ k+C +C+++F+l+ rrhhCr+CG ++C+ C+++r      + + +k+ rvC++C+++
  MMETSP1325-20131115|9414_1 232 VWTPDHAEKNCLKCNRAFTLMYRRHHCRACGMLCCDPCTKNRKILF--HIDPKKPLRVCDDCFKN 294
                 7****************************************99666..999***********985 PP

>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.7e-07   0.00091       2     103 ..     122     214 ..     121     215 .. 0.91

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 2.7e-07
                 SBEEEEEEEETSSSCEEEEEEEEETTEEEEESSSST...TCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHHH CS
  PF00169.24   2 ikeGyllkksellktwkkryfvLtsnyLlyfksskk...ksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknll 103
                 +++G l k+   ++  k++y vL++++L+y  +       s++   + ipl++ +v  +++         +n f+i  +++  +++ a +  ++++W++++++ +
  MMETSP1325-20131115|9414_1 122 VRQGELIKRC--RRADKPFYYVLFNDVLIYGSPARGqsgGSRYVHHREIPLSSSKVIAVENE--------ENAFQIFSENK-AFVVIAANG-DMEAWYNDMEKTI 214
                 7899999999..9999**************9999889999****************999995........8*********9.888877776.9*******99865 PP

>> PF09983.4  Uncharacterized protein conserved in bacteria C-term(DUF2220)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.063   2.2e+02      12      59 ..      66     115 ..      52     140 .. 0.61
   2 ?    9.4   0.0   0.00014      0.48      37      83 ..     166     213 ..     160     220 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.063
   PF09983.4  12 rlldkelaa..ellagledlavtaeelaelelpaervlivENktsflalp 59 
                  ++++++ +  e+l++++d+a  ++++ +++ + ++vli   k s  ++ 
  MMETSP1325-20131115|9414_1  66 NPDHPDVPLleEALQKIKDSASHINDVIAVRENQQQVLILDAKWSGFQCS 115
                 44444444433455566666666666666766777777666555555554 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00014
   PF09983.4  37 aelelpaervlivENktsflalp.elpgtlvilggGyaveslaklvkw 83 
                 +e++l+ ++v+ vEN++++ ++  e +  +vi  +G   ++ ++++k 
  MMETSP1325-20131115|9414_1 166 REIPLSSSKVIAVENEENAFQIFsENKAFVVIAANGDMEAWYNDMEKT 213
                 5778999**********9888776888999999999888777776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       738  (0.0539789); expected 273.4 (0.02)
Passed bias filter:                      444  (0.0324751); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.61
# Mc/sec: 1213.89
//
Query:       MMETSP1325-20131115|9420_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|9421_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 221.20
//
Query:       MMETSP1325-20131115|9422_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 915.41
//
Query:       MMETSP1325-20131115|9419_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.081   13.3   2.2       0.13   12.6   1.5    1.4  1  PF03964.10 Chorion family 2
       0.44   10.4   1.7        3.8    7.3   0.1    2.2  2  PF10146.4  Zinc finger-containing protein


Domain annotation for each model (and alignments):
>> PF03964.10  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.5   1.9e-05      0.13      41      86 ..     213     257 ..     180     265 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.9e-05
  PF03964.10  41 lvssssdssAaaaAasalaalnaGsykvwkvpsyevdgaygpssgy 86 
                   ++  +s+AaaaAa+a+aa+ +G ++  +  + +v  + gp s+ 
  MMETSP1325-20131115|9419_1 213 QHGPQAESEAAAAAAAAAAAVPQG-PLFMYLSASNVGISPGPPSSD 257
                 457888999999999999999886.577777777777775555454 PP

>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1   0.00056       3.8     108     165 ..      85     137 ..      69     155 .. 0.80
   2 ?    2.2   0.1     0.021   1.4e+02     148     169 ..     212     233 ..     167     254 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00056
   PF10146.4 108 ekLpeleeeegskiskdrfekarsplepeasvtalPssssgflpPpapselsallaaa 165
                 e Lp l +ee +k++   +e+  +pl+p a+  ++P +  + lpPpa++e++a+l + 
  MMETSP1325-20131115|9419_1  85 ELLPMLTDEENLKAK-IVLESFSQPLSPPAA--TTPLE--AILPPPAETEAEAVLESQ 137
                 457889999988887.889**********55..45656..6799**999999998775 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.021
   PF10146.4 148 gflpPpapselsallaaalaaa 169
                 g+  P+a+se+ a +aaa+aa+
  MMETSP1325-20131115|9419_1 212 GQHGPQAESEAAAAAAAAAAAV 233
                 4777888666655555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.42s 00:00:00.99 Elapsed: 00:00:00.50
# Mc/sec: 1274.86
//
Query:       MMETSP1325-20131115|9418_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       719  (0.0525892); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 309.53
//
Query:       MMETSP1325-20131115|9424_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 857.36
//
Query:       MMETSP1325-20131115|9426_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|9423_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-29  101.3   0.2    6.4e-29  101.0   0.1    1.0  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.0   0.1   4.7e-33   6.4e-29       6     153 ..       9     160 ..       5     163 .. 0.83

  Alignments for each domain:
  == domain 1    score: 101.0 bits;  conditional E-value: 4.7e-33
                 XXXXXXXXX.XXXXXX.---...-TTTTT--------TTT------------------S--TT--.STT.--...---....--S-TT.THHHH---HHHHHHHHTT---------------------.---..-----------STTT----TTTTT----- CS
  PF00504.16   6 dgslpgdlg.fDplglskdp...tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawae.ag...gls....lptllalqillligflelareqelkapesegsekraypGglgfdpl.gla..kdeeekaelklkEiknGRlAMiaflgfvv 153
                 +g +++++g fDp+g s++    ++ ++r+aEl+H+RvAMla++G++++ ++++++++ ++ae++++++ ++   + +    +pt + +qi++ i ++e+   +e+ +p           G+  fdp+ gl+  k+ee+k + ++ E+ nGRlAMi+++gf +
  MMETSP1325-20131115|9423_1   9 PG-IQAPIGyFDPVGYSTKVsdeGMLWFRAAELKHSRVAMLAFTGWCINGAGIHFPGYLSKAEGVTFESlSKmapK-DaweaMPTSGKAQIVFSIFIAEVV--TEMIKPHY------TLAGD-DFDPIdGLKryKTEEAKLKAQNTELANGRLAMIGMMGFSA 160
                 56.8999**********444556*******************************9999999999985553333222.133469999**************5..77766644......35788.5****889999***************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 911.66
//
Query:       MMETSP1325-20131115|9428_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 123.95
//
Query:       MMETSP1325-20131115|9427_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00052   19.6   0.1      0.046   13.6   0.0    2.6  2  PF13516.1  Leucine Rich repeat
     0.0012   18.3   0.1     0.0023   17.4   0.0    1.4  1  PF12799.2  Leucine Rich repeats (2 copies)
     0.0055   16.5   0.6        3.4    8.1   0.0    2.7  3  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.077   12.6   0.3        0.2   11.2   0.2    1.5  1  PF13855.1  Leucine rich repeat
       0.11   12.4   0.1         16    5.9   0.0    2.5  2  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.036        98       5      23 ..      70      88 ..      65      89 .. 0.84
   2 !   13.6   0.0   1.7e-05     0.046       3      19 ..      96     112 ..      94     113 .] 0.92

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.036
   PF13516.1  5 tsLdLsnNqigdeGlsaLa 23
                ++L L +N +++    a+a
  MMETSP1325-20131115|9427_1 70 KELSLRGNELDSLAGIAIA 88
                79********998877776 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 1.7e-05
   PF13516.1   3 nLtsLdLsnNqigdeGl 19 
                 +L++L+L +N +gdeG+
  MMETSP1325-20131115|9427_1  96 SLKVLNLFDNALGDEGA 112
                 8***************8 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   8.3e-07    0.0023       4      38 ..      70     109 ..      68     110 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 8.3e-07
   PF12799.2   4 evLdLsnNnIkdlppela......nLpnLktLnLsnNpisd 38 
                 ++L+L++N + +l + +a      n  +Lk+LnL  N + d
  MMETSP1325-20131115|9427_1  70 KELSLRGNELDSLAG-IAiaravtNNASLKVLNLFDNALGD 109
                 79************9.555566669*********9998765 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       3.4   9.2e+03       2       6 ..      58      62 ..      57      63 .. 0.69
   2 !    8.1   0.0    0.0012       3.4       4      16 ..      70      82 ..      67      83 .. 0.90
   3 !    5.9   0.0    0.0066        18       2      14 ..      96     108 ..      95     109 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 3.4
   PF13504.1  2 nLkeL 6 
                +L+eL
  MMETSP1325-20131115|9427_1 58 CLTEL 62
                67777 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0012
   PF13504.1  4 keLdLsgnrLtsL 16
                keL+L+gn+L+sL
  MMETSP1325-20131115|9427_1 70 KELSLRGNELDSL 82
                89********998 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.0066
   PF13504.1   2 nLkeLdLsgnrLt 14 
                 +Lk+L+L +n L 
  MMETSP1325-20131115|9427_1  96 SLKVLNLFDNALG 108
                 7*********885 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   7.5e-05       0.2       4      37 ..      70     107 ..      67     109 .. 0.55

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 7.5e-05
   PF13855.1   4 keLdLsnNrlkvi....pdgaFkglsnLkvLdLsgnnl 37 
                 keL L++N+l ++      +a  +  +LkvL+L +n+l
  MMETSP1325-20131115|9427_1  70 KELSLRGNELDSLagiaIARAVTNNASLKVLNLFDNAL 107
                 56666666666663333334444456666666655554 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0    0.0057        16       3      15 ..      70      82 ..      69      88 .. 0.85
   2 ?    3.9   0.1     0.026        70       1      12 [.      96     107 ..      96     109 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0057
                SEEEETSSBCBCH CS
  PF00560.28  3 eeLdLsgNnltsl 15
                +eL+L+gN l sl
  MMETSP1325-20131115|9427_1 70 KELSLRGNELDSL 82
                79******99875 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.026
                 TESEEEETSSBC CS
  PF00560.28   1 nLeeLdLsgNnl 12 
                 +L++L+L +N l
  MMETSP1325-20131115|9427_1  96 SLKVLNLFDNAL 107
                 69******9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 483.55
//
Query:       MMETSP1325-20131115|9425_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   14.8   0.2      0.047   13.9   0.2    1.5  1  PF10183.4 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)


Domain annotation for each model (and alignments):
>> PF10183.4  ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   3.4e-06     0.047      77     102 ..      80     105 ..      73     108 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.4e-06
   PF10183.4  77 glaykPDtsiqeWArrEAlrrikrre 102
                 + ++kP  +++ WA+ EA+ r+kr  
  MMETSP1325-20131115|9425_1  80 WPSFKPRNDMKIWAKDEAEARLKRMD 105
                 778******************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|9429_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|9430_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-40  137.9   0.0    2.6e-40  137.8   0.0    1.0  1  PF00012.15 Hsp70 protein
  ------ inclusion threshold ------
      0.048   13.3   0.1      0.074   12.7   0.0    1.3  1  PF14450.1  Cell division protein FtsA


Domain annotation for each model (and alignments):
>> PF00012.15  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.8   0.0   3.8e-44   2.6e-40       1     103 [.      13     115 ..      13     116 .] 0.98

  Alignments for each domain:
  == domain 1    score: 137.8 bits;  conditional E-value: 3.8e-44
                 EEXEEXXXXEEBXEEEXXXXEEEXXXTTXXSSEESEEEEXXX.SEEXXXCCCTTTTTTGGGEEEXGGGTXXXBTTSTTHHHHHHHXSSEEEEETTTEEEEEEEX CS
  PF00012.15   1 viGiDLGttnsvvavmeggkvevianeegnrttPsvvaFtkk.erlvGeaAkrqavtnpkntvfsvkrliGrkfsdpevqkeikhlpykvvkkengkavvevea 103
                 viG+DLGtt+s+v+v+++g+ve+i n++gnr+tPs+v+++++ erl+G+aAk+qa++np++tvf+vkrliGrkfsd++vq+++k lp+++++k ++k++v+ve+
  MMETSP1325-20131115|9430_1  13 VIGVDLGTTYSCVGVFQKGHVEIIPNDQGNRITPSYVSWDPHgERLIGDAAKNQATVNPEQTVFDVKRLIGRKFSDSTVQADKKLLPFEIIEK-DDKPYVQVEV 115
                 79******************************************************************************************9.8999999975 PP

>> PF14450.1  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.1e-05     0.074       1      30 [.      13      39 ..      13      48 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.1e-05
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF14450.1  1 valvDiGagktdvavaekgklgelrvigvG 30
                v++vD+G++ ++v v++k   g++++i+  
  MMETSP1325-20131115|9430_1 13 VIGVDLGTTYSCVGVFQK---GHVEIIPND 39
                79***************9...777777755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|9431_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.7  10.8        0.3   10.9   7.5    1.4  1  PF13801.1 Heavy-metal resistance
        5.2    7.2   6.6         27    4.9   4.6    2.2  1  PF08227.6 DASH complex subunit Hsk3 like


Domain annotation for each model (and alignments):
>> PF13801.1  Heavy-metal resistance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   7.5   4.4e-05       0.3      10      88 ..       3      76 ..       2      91 .] 0.69

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4.4e-05
   PF13801.1 10 aGvvvgaalrgpgppgggpparrhelrpaalaLpeeqrralraalrearrevralrralraarrellallraepfDpaa 88
                +G+++++ +rg+ p+++++p+  +++  + ++Lp+e + +l+a++++ r++  a+ +++++a  ++l++  a+++D+a 
  MMETSP1325-20131115|9431_1  3 GGGAAAGITRGGVPHMPPGPP--GSFPTDPSQLPPELQ-ELHAQMEQLRAADPAAFEEMMQA--AALQAQMATNPDEAL 76
                588999999999999999888..788888888888865.57777777777777777777766..667777777777653 PP

>> PF08227.6  DASH complex subunit Hsk3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   4.6     0.004        27       6      44 ..      39      82 ..      30      83 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.004
   PF08227.6  6 qLasqLaqLq.aNLadteelLettsiQa....esirkLGkvhgS 44
                 L++q++qL  a  a +ee ++ ++ Qa    +  + LG++h++
  MMETSP1325-20131115|9431_1 39 ELHAQMEQLRaADPAAFEEMMQAAALQAqmatNPDEALGGLHAA 82
                58899999952578999999999999996555555678888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       622  (0.0454944); expected 273.4 (0.02)
Passed bias filter:                      443  (0.032402); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 396.49
//
Query:       MMETSP1325-20131115|9434_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-21   73.5   0.0      1e-20   73.0   0.0    1.2  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    3.8e-15   55.5   0.0    5.8e-15   54.9   0.0    1.3  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    6.9e-08   32.1   0.0    1.1e-07   31.4   0.0    1.3  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.013   14.9   0.0      0.018   14.4   0.0    1.2  1  PF04847.7  Calcipressin
      0.016   14.8   0.3       0.03   13.9   0.2    1.4  1  PF11608.3  Limkain b1


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.0   3.7e-24     1e-20       1      69 [.       9      78 ..       9      79 .. 0.98

  Alignments for each domain:
  == domain 1    score: 73.0 bits;  conditional E-value: 3.7e-24
                EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
  PF00076.17  1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseedaekAlealngkklggrel 69
                l V+n+++d+ +e+L + F++fG+i+++ ++ d   +r++gfafVeF++++dae+A  +l++++++gre+
  MMETSP1325-20131115|9434_1  9 LLVRNISYDTRKEDLDDRFRDFGDIRDVYIPVDyYSQRPRGFAFVEFQNPDDAEEARIKLDKTMINGREI 78
                68******************************************************************98 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.0   2.1e-18   5.8e-15       1      69 []       9      79 ..       9      79 .. 0.96

  Alignments for each domain:
  == domain 1    score: 54.9 bits;  conditional E-value: 2.1e-18
   PF14259.1  1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkalkkln.lvlkgrtir 69
                l vr++++++  edl + f+++g++ +v ip +   +r+rgfAfvef +++dA++a  kl+ ++++gr i+
  MMETSP1325-20131115|9434_1  9 LLVRNISYDTRKEDLDDRFRDFGDIRDVYIPVDYYsQRPRGFAFVEFQNPDDAEEARIKLDkTMINGREIQ 79
                68*****************************99888************************99******995 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0     4e-11   1.1e-07       4      56 .]      26      83 ..      25      83 .. 0.93

  Alignments for each domain:
  == domain 1    score: 31.4 bits;  conditional E-value: 4e-11
   PF13893.1  4 lfskfGkverikifrkk.....ggqAfvefdtveaArkakeylngvklygktLkveys 56
                +f  fG++++++i  +      +g+Afvef+++++A+ a  +l+++ ++g+ ++v ++
  MMETSP1325-20131115|9434_1 26 RFRDFGDIRDVYIPVDYysqrpRGFAFVEFQNPDDAEEARIKLDKTMINGREIQVMFA 83
                5667*********98889**999******************************99876 PP

>> PF04847.7  Calcipressin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   6.7e-06     0.018      35      73 ..      51      87 ..      19      96 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 6.7e-06
   PF04847.7 35 vivifsseeaaeaarsksdwegeefegkklrlyfaqpln 73
                + v f++++ ae+ar+k+d  ++ ++g+++++ faq   
  MMETSP1325-20131115|9434_1 51 AFVEFQNPDDAEEARIKLD--KTMINGREIQVMFAQNRR 87
                5799*************88..9*************8654 PP

>> PF11608.3  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   1.1e-05      0.03      41      85 ..      50      94 ..      45      99 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.1e-05
   PF11608.3 41 savlrfanqeaaeRalkRleneDvfGnritvsespkerefndeee 85
                 a + f+n++ ae a+ +l+   + G+ i v +  ++r+ ++e +
  MMETSP1325-20131115|9434_1 50 FAFVEFQNPDDAEEARIKLDKTMINGREIQVMFAQNRRKRPEEMS 94
                6899******************************77777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 944.45
//
Query:       MMETSP1325-20131115|9437_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0019   17.4   0.0     0.0023   17.1   0.0    1.1  1  PF00227.21 Proteasome subunit


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.7e-07    0.0023      48      90 ..      29      71 ..      28      81 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.7e-07
                EEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHH CS
  PF00227.21 48 mafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaa 90
                +a+aGl++D r+lv +ar+    + ++yg+    e +++++ +
  MMETSP1325-20131115|9437_1 29 LAAAGLVPDSRMLVAHARKVSSDHWFTYGETAGAELVAAAVGE 71
                589****************************999966655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 474.48
//
Query:       MMETSP1325-20131115|9436_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       570  (0.041691); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 902.46
//
Query:       MMETSP1325-20131115|9438_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 382.50
//
Query:       MMETSP1325-20131115|9440_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 444.32
//
Query:       MMETSP1325-20131115|9432_1  [L=533]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00076   19.2   0.0     0.0012   18.6   0.0    1.2  1  PF13641.1 Glycosyltransferase like family 2
  ------ inclusion threshold ------
       0.17   11.8   2.0       0.66    9.9   1.4    2.1  1  PF08048.7 Tap RepA1 leader peptide


Domain annotation for each model (and alignments):
>> PF13641.1  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   1.7e-07    0.0012      73     230 .]      35     211 ..      27     211 .. 0.76

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 1.7e-07
   PF13641.1  73 tgkaralnealqaik............sd....lvlllDaDsvvdpdtlrrllpfflskgvglvqgpvlvla...rrsl.....lsalqalefaerhlrfmalrralgvaplaGsgllirrsvleelggfdpgfilteDyelglrlrragyrtayvpgalvyeespsslaafikqrtRwvyg 230
                 +gka+++n+a++ ++            ++    l++++D  ++v p++ ++++ +f +++ g+v   + v++    +++      +   ++  +  +   + +r+++g+++++G+++++  +  + +    + +++ eD  ++  ++ +gy+  y+ + l+ ++ p++ ++f    +Rw++g
  MMETSP1325-20131115|9432_1  35 RGKAGGMNYAVKIVQerqeertrvhgqPApaltLFAIFDCRHMVTPGFWEQTILHFFREENGIVKLYEGVKYcqvPQNFigielATDYLDMQNEYLFRYVNCIRDGVGAVTSCGTNCVWAIE--KGF-EYEE-KTMIEDTATSHAVILQGYEGTYHYEKLIFGT-PKENKDFLAAIFRWSRG 211
                 79**********977666666666655115566********************999888888888877555411244444433322222233333344556777999***********9988..444.3344.8999**************************9.99************986 PP

>> PF08048.7  Tap RepA1 leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4   9.7e-05      0.66       9      21 ..     427     439 ..     425     440 .. 0.92

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 9.7e-05
   PF08048.7   9 FLchLLLpCniSA 21 
                 FL ++LL C++ A
  MMETSP1325-20131115|9432_1 427 FLNSWLLSCIVAA 439
                 9**********88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       717  (0.0524429); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.37s 00:00:01.23 Elapsed: 00:00:00.56
# Mc/sec: 2240.80
//
Query:       MMETSP1325-20131115|9443_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-16   58.4   1.3    4.1e-16   58.2   0.9    1.0  1  PF00364.17 Biotin-requiring enzyme


Domain annotation for each model (and alignments):
>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.9     3e-20   4.1e-16       2      73 ..      12      83 ..      11      84 .. 0.97

  Alignments for each domain:
  == domain 1    score: 58.2 bits;  conditional E-value: 3e-20
                EES-S----EEEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEESS-TT-EE----ECEE CS
  PF00364.17  2 eiksPmiGesvkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllak 73
                 +  P+++ +++ gt++ +++++Gd++  g++++eve++K+++++ea ++ v  +ilv+ G +v++g ++++
  MMETSP1325-20131115|9443_1 12 VVGLPALSPTMEMGTIAVWKKAPGDTIDPGDIICEVETDKATVDFEATDEAVMGKILVDTGVEVKIGAPICV 83
                5889*****************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|9441_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0014   18.4   2.2     0.0018   18.1   1.5    1.1  1  PF03938.9 Outer membrane protein (OmpH-like)
  ------ inclusion threshold ------
      0.027   13.6   0.6      0.046   12.9   0.4    1.3  1  PF04935.7 Surfeit locus protein 6
      0.093   12.8   0.1       0.16   12.0   0.1    1.4  1  PF10631.4 Protein of unknown function (DUF2477)
       0.12   10.2   5.3       0.17    9.7   3.7    1.1  1  PF10174.4 RIM-binding protein of the cytomatrix active zone
       0.46    9.8   4.0        1.3    8.4   2.8    1.7  1  PF08598.6 Sds3-like


Domain annotation for each model (and alignments):
>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   1.5   6.5e-07    0.0018      39     102 ..      24      87 ..      18     145 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 6.5e-07
   PF03938.9  39 aklqeeakekqqelqakkkelqkeqknlqseraqlsaeaekakeeelqakeqelqayaqqlqae 102
                 +++ ++   ++q l++k+ el+ +  +l++++a l a   +a  +el+a+++ l++ ++ql a+
  MMETSP1325-20131115|9441_1  24 KEQTQRDVHYEQILKEKERELEDLFRALNQQSAVLPAHMYEAHLQELEAQKRSLATEREQLRAK 87 
                 4455555588999************************************************987 PP

>> PF04935.7  Surfeit locus protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.4   1.7e-05     0.046      56     123 ..      21      88 ..       5      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.7e-05
   PF04935.7  56 akkkeneekkivFskvefadgekakkklkekkkkkkkkgpt.dpkalLkkleakkkkleelkekdeaka 123
                 a++ke+ ++++ ++++ ++++e++ ++l +  +++  + p+  ++a+L++lea+k+ l+  +e+  aka
  MMETSP1325-20131115|9441_1  21 AATKEQTQRDVHYEQI-LKEKERELEDLFRALNQQSAVLPAhMYEAHLQELEAQKRSLATEREQLRAKA 88 
                 5678889999999999.56666777777777888888888879*******************9955465 PP

>> PF10631.4  Protein of unknown function (DUF2477)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   5.8e-05      0.16      63     114 ..      83     135 ..      45     145 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.8e-05
   PF10631.4  63 apgpkgikgik.gaapiqnqqawqqpcnpyssgqrpagltyaglppagrgddi 114
                     k  +g   +a+p ++  +w + + p  ++qr+ g    g  p+g g d 
  MMETSP1325-20131115|9441_1  83 QLRAKARNGGLgSASPARTAGTWGSNSSPTXAAQREEGTDANGEEPTGEGVDH 135
                 334444444440567999******************************99885 PP

>> PF10174.4  RIM-binding protein of the cytomatrix active zone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.7   6.3e-05      0.17     640     687 ..      39      88 ..      19      91 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 6.3e-05
   PF10174.4 640 aeeeelrqssqkkgaqaa..asnhlEkqveklesdlkqlkaEleqlklql 687
                  +e+el++  +  ++q a  + +  E ++++le++ + l+ E+eql+++ 
  MMETSP1325-20131115|9441_1  39 EKERELEDLFRALNQQSAvlPAHMYEAHLQELEAQKRSLATEREQLRAKA 88 
                 3556666666665555553378999**********************985 PP

>> PF08598.6  Sds3-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.8   0.00046       1.3      64     138 ..      31     112 ..      23     191 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00046
   PF08598.6  64 ldeeyklerieseyaeeiekakqeyeklvkllkerlinkleekikrLeeeresldiaessalllhprkfslanp.......a 138
                 + +e  l++ e+e +   ++ +q+   l  +++e  +++le ++++L  ere+l   + +  l  ++++ +a +       +
  MMETSP1325-20131115|9441_1  31 VHYEQILKEKERELEDLFRALNQQSAVLPAHMYEAHLQELEAQKRSLATEREQLRAKARNGGLGSASPARTAGTwgsnsspT 112
                 6788888999999999999999999999999***********************9998888888666655555533332220 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       821  (0.0600497); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.40s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|9442_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-17   61.4  24.3    6.7e-06   25.7   4.5    3.4  3  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.7     5e-09   6.8e-05      16      31 .]       4      19 ..       2      19 .. 0.95
   2 !   24.3   1.5   1.4e-09   1.9e-05       4      31 .]      52      78 ..      50      78 .. 0.89
   3 !   25.7   4.5   4.9e-10   6.7e-06       2      31 .]     109     138 ..     108     138 .. 0.85

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 5e-09
                EEEEETTT--EESS-- CS
  PF00397.21 16 vYYyNheTgetqWekP 31
                v++yNh+T+ +qW+kP
  MMETSP1325-20131115|9442_1  4 VFWYNHRTQSSQWDKP 19
                89*************9 PP

  == domain 2    score: 24.3 bits;  conditional E-value: 1.4e-09
                SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  4 gWeersddddGrvYYyNheTgetqWekP 31
                +W e+   + G+++YyN +T+e qWe+P
  MMETSP1325-20131115|9442_1 52 DWIEYQ-GQGGKTFYYNESTREFQWERP 78
                598877.567*****************9 PP

  == domain 3    score: 25.7 bits;  conditional E-value: 4.9e-10
                 --SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   2 ppgWeersddddGrvYYyNheTgetqWekP 31 
                 +p+W  + d+++G  ++yNh+Tge+qWe P
  MMETSP1325-20131115|9442_1 109 APEWYPYKDPNTGMRFWYNHTTGESQWETP 138
                 588**8785458****************66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 812.88
//
Query:       MMETSP1325-20131115|9444_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.46
# Mc/sec: 349.03
//
Query:       MMETSP1325-20131115|9445_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   15.4   9.4      0.014   15.4   6.5    2.5  3  PF07974.8  EGF-like domain
      0.024   14.5   4.3      0.024   14.5   3.0    3.4  3  PF12661.2  Human growth factor-like EGF
        3.9    7.3  19.9         24    4.8   4.7    2.5  2  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   6.5     3e-06     0.014       1      32 []       6      36 ..       6      36 .. 0.93
   2 ?    6.4   6.5     0.002       9.2       1      24 [.      41      62 ..      40      62 .. 0.85
   3 ?   -3.9   0.2         3   1.4e+04      28      32 .]      95      99 ..      94      99 .. 0.59

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3e-06
   PF07974.8  1 CsadgliCgghGtCvkq..cgkCvCdsgyqGktC 32
                C+ +   C+ +G C  +    +C C+ gy+G tC
  MMETSP1325-20131115|9445_1  6 CKDN---CSFNGWCSVEypISRCMCNPGYYGETC 36
                8854...************889************ PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.002
   PF07974.8  1 CsadgliCgg.hGtCvkqcgkCvCd 24
                C ++   C+  +G+C++++g C C+
  MMETSP1325-20131115|9445_1 41 CLNN---CSYpNGYCNETTGECTCK 62
                5543...9999*****99******6 PP

  == domain 3    score: -3.9 bits;  conditional E-value: 3
   PF07974.8 28 qGktC 32
                 G +C
  MMETSP1325-20131115|9445_1 95 GGEDC 99
                56777 PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   3.0   5.3e-06     0.024       2      13 .]      25      36 ..      24      36 .. 0.95
   2 ?   -0.2   0.4      0.26   1.2e+03       1       5 [.      58      62 ..      58      63 .. 0.81
   3 ?   -1.4   0.3      0.66     3e+03       8      13 .]      94      99 ..      94      99 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 5.3e-06
   PF12661.2  2 CqCppGyTGdnC 13
                C C+pGy G++C
  MMETSP1325-20131115|9445_1 25 CMCNPGYYGETC 36
                ************ PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.26
   PF12661.2  1 kCqCp 5 
                +C+C+
  MMETSP1325-20131115|9445_1 58 ECTCK 62
                5***6 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.66
   PF12661.2  8 yTGdnC 13
                + G++C
  MMETSP1325-20131115|9445_1 94 WGGEDC 99
                7799*9 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   7.4     0.016        73       3      34 ..       6      41 ..       4      46 .. 0.76
   2 ?    4.8   4.7    0.0052        24       3      23 ..      41      62 ..      40      65 .. 0.77

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.016
                STT-B-CC--B-S..----BSBSTTEE---S-..EE CS
  PF00053.19  3 CnphgsssssCds..stgqClCkenveGrkCd..rC 34
                C+++ s ++ C       +C C++++ G++C+  +C
  MMETSP1325-20131115|9445_1  6 CKDNCSFNGWCSVeyPISRCMCNPGYYGETCQyvQC 41
                7777777777777655679************84456 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.0052
                STT-B-CC.--B-S----BSBS CS
  PF00053.19  3 Cnphgsss.ssCdsstgqClCk 23
                C ++ s   + C+++tg+C Ck
  MMETSP1325-20131115|9445_1 41 CLNNCSYPnGYCNETTGECTCK 62
                55555544589**********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 750.86
//
Query:       MMETSP1325-20131115|9446_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 647.53
//
Query:       MMETSP1325-20131115|9447_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0014   18.1   0.0     0.0035   16.8   0.0    1.6  2  PF00571.23 CBS domain


Domain annotation for each model (and alignments):
>> PF00571.23  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.5e-07    0.0035      30      56 ..       6      34 ..       3      35 .. 0.88
   2 ?   -2.5   0.0      0.28   3.8e+03      11      26 ..     114     129 ..     108     130 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2.5e-07
                TSEEEEEEET..TEB---EEHHHHHHHHH CS
  PF00571.23 30 vsrlpVvDed..grlvGiitlrDllkall 56
                ++++pVv ++  +++vGii++ +l+ +l+
  MMETSP1325-20131115|9447_1  6 HNGFPVVTNEapHKYVGIILRNQLIVLLE 34
                789***87778*************98886 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.28
                 EEETTSBHHHHHHHHH CS
  PF00571.23  11 tvppdetlsealeilr 26 
                 +v+++ +l++ + ++r
  MMETSP1325-20131115|9447_1 114 FVTEECPLARCHALFR 129
                 5777777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 687.65
//
Query:       MMETSP1325-20131115|9451_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0016   17.5   0.5     0.0016   17.5   0.3    1.7  2  PF08403.5  Amino acid permease N-terminal
  ------ inclusion threshold ------
        1.4    7.0   7.0        1.5    6.9   4.8    1.0  1  PF05416.7  Southampton virus-type processing peptidase
        1.8    7.6  14.0        1.9    7.5   9.7    1.1  1  PF05285.7  SDA1
        2.2    6.4  18.0        2.2    6.4  12.4    1.1  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
        2.9    7.5  10.9        3.2    7.4   7.5    1.1  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        3.5    5.8  14.1        3.7    5.7   9.8    1.1  1  PF03344.10 Daxx Family


Domain annotation for each model (and alignments):
>> PF08403.5  Amino acid permease N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.3   7.1e-07    0.0016      34      69 ..      21      56 ..      15      61 .. 0.87
   2 ?   -2.1   0.4      0.96   2.2e+03      61      66 ..      84      89 ..      73      96 .. 0.42

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 7.1e-07
   PF08403.5 34 ggerksRPSLeeLhdvldkneslppltedesagged 69
                +  r  RPSL + h ++d++e   p+t+de +++ed
  MMETSP1325-20131115|9451_1 21 SNRRVARPSLVDAHRDVDDEEDFLPSTDDEEEDEED 56
                678999***************999999999988876 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.96
   PF08403.5 61 edesag 66
                ++es++
  MMETSP1325-20131115|9451_1 84 DEESDE 89
                222222 PP

>> PF05416.7  Southampton virus-type processing peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.8   0.00064       1.5     193     260 ..      23      89 ..       5      96 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00064
   PF05416.7 193 evaskpsvg..hdeevekadlcekeedeeeaeieskdakaegkkgknkkgrGkksnafsrrGlsdeeyde 260
                 ++ ++ps+   h ++ +++d  ++ +deee e   +d +  +kkg+  kg+Gk ++ +s    +dee de
  MMETSP1325-20131115|9451_1  23 RRVARPSLVdaHRDVDDEEDFLPSTDDEEEDE---EDEEYRPKKGRGGKGKGKGKGGMSXDEEEDEESDE 89 
                 44455554311334445556566666665554...7889999************9****99999999998 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   9.7   0.00084       1.9     110     168 ..      35      93 ..       9      97 .] 0.48

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00084
   PF05285.7 110 edeDeegewvdvesdeeeessDsedeeeesee...eeeeeesekkkkeesdeekseeeeeea 168
                  d D+e+++    +d   e++D+edee + ++    + +++ + + + +++e+++++eee++
  MMETSP1325-20131115|9451_1  35 RDVDDEEDFLPSTDD---EEEDEEDEEYRPKKgrgGKGKGKGKGGMSXDEEEDEESDEEEDE 93 
                 334444555555554...34566666554333433222222222222211111111111111 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  12.4   0.00095       2.2     217     283 ..      35      96 ..       3      97 .] 0.57

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.00095
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXX.XXXXXXXXXXX CS
   PF05793.7 217 dkegddeedsdesdkgdededeekkkkKkkkkaknkkkldDdkkkkrggdddadeydsddGddegrE 283
                    +d+e+  +++d+++ede++e+ + Kk + +k+k k     k+    d+++de +sd+ +de+ E
  MMETSP1325-20131115|9451_1  35 RDVDDEEDFLPSTDDEEEDEEDEEYRPKKGRGGKGKGK----GKGGMSXDEEEDE-ESDEEEDEEDE 96 
                 33445554445555444444444443444555555544....4455555666655.66666666655 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   7.5    0.0014       3.2     255     304 ..      29      96 ..       3      97 .] 0.64

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0014
                 XXXXXXXXXXXXXXXX..XXXXXXXXXXXXXX..................-------------------- CS
   PF03153.8 255 iQvDGagddssdesee..deeadedeeekdkv..................ieeDlddseDDvseedeedl 304
                   vD   d +++e+    +++++edee+++                     +e+ d+++D+  eedeed+
  MMETSP1325-20131115|9451_1  29 SLVDAHRDVDDEEDFLpsTDDEEEDEEDEEYRpkkgrggkgkgkgkggmsXDEEEDEESDE--EEDEEDE 96 
                 5577788888876555654444444433333378899999999999999877777776776..4454443 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   9.8    0.0016       3.7     424     476 ..      20      95 ..       1      97 [] 0.45

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0016
  PF03344.10 424 assestesP..llasqeseeeekaekeedeeddekeeed.....................kseeeeeeeeeeeeee 476
                  s + ++ P    a ++ ++ee+    +d+e++++e+e+                     ++ee+ee +eee+ee+
  MMETSP1325-20131115|9451_1  20 RSNRRVARPslVDAHRDVDDEEDFLPSTDDEEEDEEDEEyrpkkgrggkgkgkgkggmsxDEEEDEESDEEEDEED 95 
                 2333344443233455555555544344444444443444577899999999888777633333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       522  (0.0381802); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                        28  (0.00204798); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.55
# Mc/sec: 422.63
//
Query:       MMETSP1325-20131115|9450_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-05   23.3   5.7    5.8e-05   23.3   4.0    2.6  2  PF13865.1 C-terminal duplication domain of Friend of PRMT1
  ------ inclusion threshold ------
       0.49   10.4   3.8       0.13   12.3   0.6    1.5  2  PF13300.1 Domain of unknown function (DUF4078)


Domain annotation for each model (and alignments):
>> PF13865.1  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   5.7      0.81   5.6e+03      11      36 ..      31      57 ..       3      66 .. 0.66
   2 !   23.3   4.0   8.5e-09   5.8e-05       5      56 ..      65     117 ..      58     121 .] 0.56

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.81
   PF13865.1 11 kfrp.rgrgarrgrsrgrggRkgrgkk 36
                ++ + ++++a+   +r ++ ++++ k+
  MMETSP1325-20131115|9450_1 31 NTLSvKSGKAGTQERREQTAKGQKAKR 57
                333435555555555555555544443 PP

  == domain 2    score: 23.3 bits;  conditional E-value: 8.5e-09
   PF13865.1   5 kgsrggkfrprgrgarrgrsrgrggRkgrgkkkk.rkkvtredLDkeLDqYM.s 56 
                 ++++g+k     +ga +++ ++ g   ++ k  + +k++   dLDke+D Y+ +
  MMETSP1325-20131115|9450_1  65 RAAGGAKAAAAAKGAKGAKAGKAGKGAKADKT-TkEKEAPPRDLDKEMDMYWyE 117
                 44444444433333333333333333333333.358899999**********54 PP

>> PF13300.1  Domain of unknown function (DUF4078)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.6   1.8e-05      0.13      37      82 ..      20      66 ..      15      71 .. 0.88
   2 ?   -2.9   0.1      0.97   6.7e+03      59      63 ..      96     100 ..      89     110 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.8e-05
   PF13300.1 37 aFskdeeeRkkqmeeLekareeTeeerk.ereekkekrkkaleerrk 82
                +F++ +++R  +  ++++ ++ T+e+r+ +++ +k+kr++al+e+r+
  MMETSP1325-20131115|9450_1 20 KFAALKKMRSANTLSVKSGKAGTQERREqTAKGQKAKRNAALAEKRA 66
                68888999*******************944567999*******9997 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 0.97
   PF13300.1  59 Teeer 63 
                 T++e+
  MMETSP1325-20131115|9450_1  96 TTKEK 100
                 22222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       792  (0.0579286); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 604.08
//
Query:       MMETSP1325-20131115|9449_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 928.59
//
Query:       MMETSP1325-20131115|9454_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-22   77.5   6.4    2.2e-12   46.4   0.3    2.1  2  PF00397.21 WW domain
  ------ inclusion threshold ------
       0.16   11.7   1.3        4.5    7.0   0.3    2.0  2  PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.6   1.7e-12   1.2e-08       3      31 .]       3      31 ..       1      31 [. 0.90
   2 !   46.4   0.3   3.3e-16   2.2e-12       1      31 []      38      67 ..      38      67 .. 0.93

  Alignments for each domain:
  == domain 1    score: 34.5 bits;  conditional E-value: 1.7e-12
                -SEEE.E.E-.---EEEEETTT--EESS-- CS
  PF00397.21  3 pgWeersddd.dGrvYYyNheTgetqWekP 31
                +gW++  d + ++r +++Nh+T+et+W+kP
  MMETSP1325-20131115|9454_1  3 DGWVRSID-PaTNREFWINHTTRETSWTKP 31
                79**9995.569*****************9 PP

  == domain 2    score: 46.4 bits;  conditional E-value: 3.3e-16
                ---SEEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21  1 lppgWeersddddGrvYYyNheTgetqWekP 31
                lp gWee+ dd+ Grv++++h+T +t+W++P
  MMETSP1325-20131115|9454_1 38 LPAGWEEKRDDQ-GRVFFIDHNTHTTTWTDP 67
                799***777789.*****************9 PP

>> PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.3   0.00066       4.5      31      54 ..      13      34 ..       5      44 .. 0.80
   2 ?    4.2   0.0    0.0049        34      30      50 ..      48      68 ..      38      73 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00066
   PF12814.2 31 hkRyvwvhpyertllWsskkpkse 54
                ++R +w++  +r+  W+++    +
  MMETSP1325-20131115|9454_1 13 TNREFWINHTTRETSWTKPTA--Q 34
                6788*************9544..4 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0049
   PF12814.2 30 rhkRyvwvhpyertllWsskk 50
                 + R ++++ +++t  W++++
  MMETSP1325-20131115|9454_1 48 DQGRVFFIDHNTHTTTWTDPR 68
                56799************9854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|9455_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|9456_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 369.04
//
Query:       MMETSP1325-20131115|9458_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-07   29.1   5.2    2.3e-05   23.2   0.2    3.3  3  PF00036.27 EF hand
    7.4e-07   28.4   2.4    2.2e-05   23.8   0.1    2.9  3  PF13405.1  EF-hand domain
    3.6e-06   25.9   0.3    1.7e-05   23.8   0.0    2.3  3  PF13202.1  EF hand
    1.2e-05   25.2   0.2      2e-05   24.4   0.1    1.5  1  PF13499.1  EF-hand domain pair
    2.1e-05   23.8   1.6     0.0078   15.6   0.1    2.7  3  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.074   10.6   0.0      0.077   10.6   0.0    1.0  1  PF06253.6  Trimethylamine methyltransferase (MTTB)
      0.085   12.4   0.2       0.36   10.4   0.2    1.8  2  PF12763.2  Cytoskeletal-regulatory complex EF hand
       0.11   11.9   0.0       0.14   11.5   0.0    1.3  1  PF05042.8  Caleosin related protein


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.2   1.4e-08   2.3e-05       4      26 ..      37      59 ..      34      62 .. 0.88
   2 ?    2.7   0.0     0.048        83      18      28 ..      67      77 ..      67      78 .. 0.89
   3 ?    4.3   0.1     0.015        25      16      27 ..      87      98 ..      86      99 .. 0.92

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 1.4e-08
                HHHHHHCTTTSSEBEHHHHHHHH CS
  PF00036.27  4 eaFkefDkDgdGkIsfeEfkeal 26
                 aF++fD D+dG +s eE+ ++l
  MMETSP1325-20131115|9458_1 37 GAFELFDADKDGIVSAEEMAQVL 59
                69*****************9988 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.048
                EHHHHHHHHHH CS
  PF00036.27 18 sfeEfkealkk 28
                ++eE++ ++kk
  MMETSP1325-20131115|9458_1 67 TKEELLGMMKK 77
                689******97 PP

  == domain 3    score: 4.3 bits;  conditional E-value: 0.015
                EBEHHHHHHHHH CS
  PF00036.27 16 kIsfeEfkealk 27
                kI+fe f+++++
  MMETSP1325-20131115|9458_1 87 KIDFEGFVRMMT 98
                8**********7 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.1   1.3e-08   2.2e-05       2      30 ..      35      62 ..      34      63 .. 0.89
   2 ?    0.8   0.1      0.32   5.4e+02      18      28 ..      67      77 ..      67      85 .. 0.80
   3 ?    2.4   0.0     0.098   1.7e+02      14      27 ..      84      98 ..      80     104 .. 0.84

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 1.3e-08
                HH---GCC-------B---HHHHHHH.H- CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrksl 30
                +  aF+lfD d+dG ++aeE+ ++L  s 
  MMETSP1325-20131115|9458_1 35 FTGAFELFDADKDGIVSAEEMAQVLD-SI 62
                6669*********************8.65 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.32
                ---HHHHHHH. CS
   PF13405.1 18 daeELrdaLrk 28
                ++eEL+ +++k
  MMETSP1325-20131115|9458_1 67 TKEELLGMMKK 77
                789******96 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.098
                --.-B---HHHHHHH CS
   PF13405.1 14 dG.kidaeELrdaLr 27
                dG kid+e ++++++
  MMETSP1325-20131115|9458_1 84 DGeKIDFEGFVRMMT 98
                6679*******9998 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   9.8e-09   1.7e-05       4      24 ..      38      58 ..      36      59 .. 0.91
   2 ?   -2.3   0.0       1.8     3e+03      17      22 ..      67      72 ..      67      75 .. 0.72
   3 ?   -2.0   0.0       1.5   2.5e+03      15      19 ..      87      91 ..      87      97 .. 0.70

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 9.8e-09
                HHHHH--S----B-HHHHHHH CS
   PF13202.1  4 tFrafDlNgDGkIsreELkrl 24
                +F+ fD+++DG +s+eE+ ++
  MMETSP1325-20131115|9458_1 38 AFELFDADKDGIVSAEEMAQV 58
                4*****************986 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.8
                -HHHHH CS
   PF13202.1 17 sreELk 22
                ++eEL 
  MMETSP1325-20131115|9458_1 67 TKEELL 72
                689*96 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 1.5
                -B-HH CS
   PF13202.1 15 kIsre 19
                kI++e
  MMETSP1325-20131115|9458_1 87 KIDFE 91
                79988 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.1   1.2e-08     2e-05       4      66 .]      34      97 ..      22      97 .. 0.84

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 1.2e-08
   PF13499.1  4 e...aFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkn.gdG.vlsfeEflqai 66
                e   aF+l+D d+dg ++ ee+ ++l+ +g    + +++e+l   +k++ +   dG +++fe f+ ++
  MMETSP1325-20131115|9458_1 34 EftgAFELFDADKDGIVSAEEMAQVLDSIG----HNHTKEELLGMMKKAGTVgDDGeKIDFEGFVRMM 97
                55558*************************....66666666666998877757789****9999887 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   4.6e-06    0.0078      24      51 ..      32      59 ..      10      62 .. 0.80
   2 ?   -1.7   0.0       1.2     2e+03       6      14 ..      67      75 ..      67      82 .. 0.60
   3 !    6.8   0.0    0.0026       4.5       3      26 ..      86     103 ..      83     105 .. 0.66

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 4.6e-06
   PF13833.1 24 eeevdilfrefDtdgdGkisfeEFcvll 51
                 ee++  f +fD+d+dG++s eE  ++l
  MMETSP1325-20131115|9458_1 32 LEEFTGAFELFDADKDGIVSAEEMAQVL 59
                6778888*************99977665 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 1.2
   PF13833.1  6 treeLkral 14
                t+eeL  ++
  MMETSP1325-20131115|9458_1 67 TKEELLGMM 75
                566666655 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0026
   PF13833.1   3 GlItreeLkralallglkglseee 26 
                  +I++e + r     ++  l+ +e
  MMETSP1325-20131115|9458_1  86 EKIDFEGFVR-----MMT-LWVQE 103
                 5788888888.....555.66665 PP

>> PF06253.6  Trimethylamine methyltransferase (MTTB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   4.5e-05     0.077      24      86 ..      30      92 ..       9     101 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 4.5e-05
   PF06253.6 24 rrlkreiapyellseeelerih.easlriLeevGievlddealellkkaGAkvdeeeervrfdr 86
                 +l++  +  el++ ++   +  e+  ++L+ +G +  ++e l ++kkaG  v++++e++ f+ 
  MMETSP1325-20131115|9458_1 30 TQLEEFTGAFELFDADKDGIVSaEEMAQVLDSIGHNHTKEELLGMMKKAGT-VGDDGEKIDFEG 92
                4455555666677666655554145669**********************6.667799999975 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.016        27      35      67 ..      27      57 ..      10      63 .. 0.73
   2 ?   10.4   0.2   0.00021      0.36      21      71 ..      45      99 ..      28     105 .. 0.72

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.016
   PF12763.2 35 lknskleedklekiwdladidedgkldfeefci 67
                + n++le  +++  ++l d d+dg +  ee++ 
  MMETSP1325-20131115|9458_1 27 FTNTQLE--EFTGAFELFDADKDGIVSAEEMAQ 57
                5555554..3566799*********99999875 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00021
   PF12763.2 21 pednkltgdkvapvlkn...skleedklekiwdladidedg.kldfeefciamrl 71
                ++d  ++ +++a+vl +    + +e+ l  + +   + +dg k+dfe f+ +m l
  MMETSP1325-20131115|9458_1 45 DKDGIVSAEEMAQVLDSighNHTKEELLGMMKKAGTVGDDGeKIDFEGFVRMMTL 99
                46778999999999986222455666677788888898887469******99987 PP

>> PF05042.8  Caleosin related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.3e-05      0.14      14      42 ..      40      68 ..      27      84 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 8.3e-05
   PF05042.8 14 affdrnkdGivyPwetyqGlralGfnviv 42
                 +fd +kdGiv   e  q l ++G n   
  MMETSP1325-20131115|9458_1 40 ELFDADKDGIVSAEEMAQVLDSIGHNHTK 68
                57**********************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 512.82
//
Query:       MMETSP1325-20131115|9460_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-08   33.5  16.0    9.3e-06   25.0   3.0    2.9  3  PF07699.8  GCC2 and GCC3
  ------ inclusion threshold ------
      0.021   14.7  10.3       0.41   10.6   0.8    3.6  4  PF00020.13 TNFR/NGFR cysteine-rich region
       0.13   11.9  13.1       0.22   11.1   3.9    2.9  2  PF07562.9  Nine Cysteines Domain of family 3 GPCR
        2.2    7.8   7.9        5.3    6.6   5.5    1.7  1  PF12511.3  Protein of unknown function (DUF3716)
        9.8    6.3  10.6         27    4.9   4.4    2.9  3  PF13948.1  Domain of unknown function (DUF4215)


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.3    0.0049        13       6      26 ..      13      35 ..       9      36 .. 0.71
   2 !   25.0   3.0   3.4e-09   9.3e-06       1      38 [.      26      62 ..      26      67 .. 0.88
   3 !   17.4   0.6   7.7e-07    0.0021       5      40 ..      63      98 ..      60     108 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0049
   PF07699.8  6 kgnkkCep..CprGtYkneegqk 26
                ++ +kC +  Cp G+Y +   q+
  MMETSP1325-20131115|9460_1 13 TEIEKCKLtgCPAGYYLDAIAQD 35
                5667885444******8877765 PP

  == domain 2    score: 25.0 bits;  conditional E-value: 3.4e-09
   PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgttTs 38
                G+yl++  + C +C+ G Y +++g ++C +C  +   s
  MMETSP1325-20131115|9460_1 26 GYYLDAIAQDCRACEAGKYTPTGGTTECVECQEN-ADS 62
                9****999***********************998.344 PP

  == domain 3    score: 17.4 bits;  conditional E-value: 7.7e-07
   PF07699.8  5 kkgnkkCepCprGtYkneegqkkCiaCppg.ttTskk 40
                ++g+k+C +C++ +++++e+   C  Cp+    T+ +
  MMETSP1325-20131115|9460_1 63 EEGSKECYLCKESYFWDYESGM-CVLCPKViGPTDXE 98
                67889*************9988.*****865555555 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.3   1.2e+04      28      32 ..      15      19 ..      13      21 .. 0.59
   2 ?   10.6   0.8   0.00015      0.41       1      32 [.      23      57 ..      23      63 .. 0.50
   3 ?    7.1   2.1    0.0019       5.2       1      20 [.      39      58 ..      39      70 .. 0.83
   4 ?    6.4   0.1     0.003       8.3       1      18 [.      72      88 ..      72      93 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 4.3
                EB--B CS
  PF00020.13 28 vspCt 32
                +++C+
  MMETSP1325-20131115|9460_1 15 IEKCK 19
                55665 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00015
                C-TTEEEESSCSEEEEEEE-B-T.......TCEEEB--B CS
  PF00020.13  1 CeegtYtdsknhrqClsCskCep.......gtvlvspCt 32
                C+ g+Y d  +++ C   + Ce        gt +  +C+
  MMETSP1325-20131115|9460_1 23 CPAGYYLDAIAQD-C---RACEAgkytptgGTTECVECQ 57
                7788888855544.4...555542223344444444444 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0019
                C-TTEEEESSCSEEEEEEE- CS
  PF00020.13  1 CeegtYtdsknhrqClsCsk 20
                Ce g+Yt   ++ +C++C++
  MMETSP1325-20131115|9460_1 39 CEAGKYTPTGGTTECVECQE 58
                ********888899999975 PP

  == domain 4    score: 6.4 bits;  conditional E-value: 0.003
                C-TTEEEESSCSEEEEEE CS
  PF00020.13  1 CeegtYtdsknhrqClsC 18
                C+e++++d++    C+ C
  MMETSP1325-20131115|9460_1 72 CKESYFWDYES-GMCVLC 88
                ********988.558766 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.9   8.1e-05      0.22      27      51 ..      35      59 ..      17      62 .. 0.90
   2 ?    4.3   0.5     0.011        30      27      50 ..      68      90 ..      63      92 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 8.1e-05
   PF07562.9 27 dCvpCpegeisnetdettCkkCpee 51
                dC  C++g++  + ++t+C++C+e+
  MMETSP1325-20131115|9460_1 35 DCRACEAGKYTPTGGTTECVECQEN 59
                8***********99********997 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.011
   PF07562.9 27 dCvpCpegeisnetdettCkkCpe 50
                +C  C+e  + +  ++  C+ Cp+
  MMETSP1325-20131115|9460_1 68 ECYLCKESYFWD-YESGMCVLCPK 90
                699999999988.55889999986 PP

>> PF12511.3  Protein of unknown function (DUF3716)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.5     0.002       5.3      12      57 ..      33      86 ..      21      90 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.002
   PF12511.3 12 pepCtrCrrgr....gpFkeCvvvpgseesklfkgaCaNCv....ynskgsrCs 57
                ++ C++C+ g+    g  +eCv ++++ +s++ ++ C  C+    ++ +  +C 
  MMETSP1325-20131115|9460_1 33 AQDCRACEAGKytptGGTTECVECQENADSEEGSKECYLCKesyfWDYESGMCV 86
                689******998888889********************9964444666666665 PP

>> PF13948.1  Domain of unknown function (DUF4215)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   4.4      0.01        27       4      47 ..      23      72 ..      21      73 .. 0.70
   2 ?    3.8   2.7     0.023        62       1      25 [.      53      76 ..      53      82 .. 0.83
   3 ?    1.3   1.6      0.13   3.7e+02       1      17 [.      69      85 ..      69      91 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.01
   PF13948.1  4 CqegyylnqnnqkCesiCGDgiia...gdEqCddg..nsvsnd...gCnndC 47
                C  gyyl++  q C   C  g  +   g+ +C  +  n +s+     C+  C
  MMETSP1325-20131115|9460_1 23 CPAGYYLDAIAQDC-RACEAGKYTptgGTTECVECqeNADSEEgskECYL-C 72
                999*****999999.99999999988877777766332333333345665.6 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.023
   PF13948.1  1 CleCqegyylnqnnqkCesiCGDgi 25
                C+eCqe+   ++ ++ C   C+ ++
  MMETSP1325-20131115|9460_1 53 CVECQENADSEEGSKEC-YLCKESY 76
                9*********9999999.7777665 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.13
   PF13948.1  1 CleCqegyylnqnnqkC 17
                C+ C+e y +++ +  C
  MMETSP1325-20131115|9460_1 69 CYLCKESYFWDYESGMC 85
                99*****9999888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       502  (0.0367174); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 621.10
//
Query:       MMETSP1325-20131115|9452_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-26   91.5   0.1    7.8e-26   91.0   0.1    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.1   5.7e-30   7.8e-26       4     154 ..      47     209 ..      44     211 .. 0.75

  Alignments for each domain:
  == domain 1    score: 91.0 bits;  conditional E-value: 5.7e-30
                 XXXXXXXXXXX.XXXXXX.---...-TTTTT--------TTT------------------S--TT--.STT.--...---....--S-TT.THHHH---HHHHHHHHTT------..........------------------.-----------STTT----TTTTT------ CS
  PF00504.16   4 eldgslpgdlg.fDplglskdp...tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawae.ag...gls....lptllalqillligflelareqelkapeseg..........sekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvq 154
                 +++g +++++g fDp+g s+     ++ ++r+aEl+H+RvAMla++G++v+ l+ +++++    +++++++ ag   + +     p  + lqi+ +ig+le+   +el +p  ++          + ++      +f     +  + +e+ + ++kE+ nGRlAMi+++gf ++
  MMETSP1325-20131115|9452_1  47 DMPG-IQAPIGfFDPVGYSTTVspeAMLWFRAAELKHSRVAMLAFVGWCVNGLGWHFPGQ--LSSTVKFEDlAGmapR-DawaaCPEEGKLQIIGFIGVLETV--TELIKPHYTKagkepyppmiKPRK-----GYFGTASTQiLEGAELLTAQNKELANGRLAMIGMMGFSAA 209
                 5677.899***********544667****************************9997763..3455667776663321.132347777999***********7..555555555534666544433333.....445555555667899**********************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1353.24
//
Query:       MMETSP1325-20131115|9457_1  [L=478]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       597  (0.0436659); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.86u 0.36s 00:00:01.22 Elapsed: 00:00:00.62
# Mc/sec: 1847.51
//
Query:       MMETSP1325-20131115|9462_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-23   80.7   9.9    1.2e-10   41.0   0.1    3.1  3  PF13424.1  Tetratricopeptide repeat
    9.6e-22   76.0   4.5    3.8e-07   29.6   0.0    3.7  4  PF13374.1  Tetratricopeptide repeat
    5.8e-11   41.6   5.3      0.041   14.1   0.3    4.3  4  PF07721.9  Tetratricopeptide repeat
    6.7e-09   34.8   6.0      0.016   14.9   0.0    4.2  4  PF07719.12 Tetratricopeptide repeat
    8.8e-08   32.5   6.0    0.00012   22.5   0.0    3.2  3  PF13432.1  Tetratricopeptide repeat
    8.1e-07   29.0   9.4      0.025   15.0   0.1    4.2  4  PF13428.1  Tetratricopeptide repeat
    5.8e-06   26.3   7.3       0.92    9.9   0.1    4.4  4  PF13174.1  Tetratricopeptide repeat
    1.2e-05   24.7   0.2     0.0035   16.8   0.0    3.1  3  PF13414.1  TPR repeat
    2.5e-05   23.9   0.3        3.9    7.8   0.0    4.1  4  PF13431.1  Tetratricopeptide repeat
    0.00019   20.8   0.4       0.44   10.3   0.0    3.3  4  PF13181.1  Tetratricopeptide repeat
    0.00076   18.8   1.5        1.3    8.6   0.0    3.9  4  PF00515.23 Tetratricopeptide repeat
     0.0014   18.2   3.1        2.5    7.9   0.0    3.5  4  PF13176.1  Tetratricopeptide repeat
     0.0031   17.1   0.4        1.4    8.6   0.0    3.4  3  PF07720.7  Tetratricopeptide repeat
     0.0036   17.1   0.9       0.22   11.3   0.0    2.7  3  PF09543.5  Protein of unknown function (DUF2379)
     0.0072   16.3   0.0       0.03   14.3   0.0    1.9  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
     0.0074   16.0   0.2      0.022   14.4   0.1    2.0  2  PF13371.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.1   1.4e-13   1.2e-10       9      75 ..       3      70 ..       1      73 [. 0.95
   2 !   38.4   0.2   9.4e-13     8e-10      10      70 ..      46     107 ..      45     115 .. 0.96
   3 !   18.7   0.7   1.3e-06    0.0011       1      65 [.      79     144 ..      79     154 .] 0.80

  Alignments for each domain:
  == domain 1    score: 41.0 bits;  conditional E-value: 1.4e-13
   PF13424.1  9 nnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75
                n l++v  ++gd+d A++ ye+ + l  +++g +h  t+++  nla++  ++gd+d A++ +e A+++
  MMETSP1325-20131115|9462_1  3 NTLGTVMSEQGDLDAARKVYEETVGLkEALYGAEHSSTLVTKGNLAIVMKKQGDLDGARQQYEAAIRV 70
                6899**99******************99999**********************************986 PP

  == domain 2    score: 38.4 bits;  conditional E-value: 9.4e-13
   PF13424.1  10 nlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleyle 70 
                 nla v +++gd+d A++ ye a+ +  r+lg +hpdt+    nla + + +g++++A+e+le
  MMETSP1325-20131115|9462_1  46 NLAIVMKKQGDLDGARQQYEAAIRVgERTLGAEHPDTLIDKGNLALVMQLQGELQAARELLE 107
                 89**********************************************************98 PP

  == domain 3    score: 18.7 bits;  conditional E-value: 1.3e-06
   PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeA 65 
                 hpd+ +   nlalv + +g+++ A+el+e ++    r+ g+dhp    a   la+++++l + +eA
  MMETSP1325-20131115|9462_1  79 HPDTLIDKGNLALVMQLQGELQAARELLEIVVGGsERQNGPDHPFSKFAKGRLAICLRKLAEKAEA 144
                 666666678*************************99999**9887666667777777777777766 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   8.5e-10   7.3e-07       4      40 ..       1      37 [.       1      39 [. 0.96
   2 !   29.6   0.0   4.4e-10   3.8e-07       1      42 []      40      81 ..      40      81 .. 0.96
   3 !   17.5   0.0   2.8e-06    0.0024       7      41 ..      88     122 ..      86     123 .. 0.97
   4 ?   -1.3   0.2       2.3     2e+03       8      21 ..     131     144 ..     129     154 .] 0.58

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 8.5e-10
   PF13374.1  4 alnnLAlalrargryeeAlaleeealairrrllGddH 40
                a n+L+ + +++g++++A++ +ee++ ++++l+G++H
  MMETSP1325-20131115|9462_1  1 AKNTLGTVMSEQGDLDAARKVYEETVGLKEALYGAEH 37
                57*********************************** PP

  == domain 2    score: 29.6 bits;  conditional E-value: 4.4e-10
   PF13374.1  1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42
                t+ +  nLA++  ++g+++ A++ +e+a  + +r lG++HPd
  MMETSP1325-20131115|9462_1 40 TLVTKGNLAIVMKKQGDLDGARQQYEAAIRVGERTLGAEHPD 81
                677899***********************************8 PP

  == domain 3    score: 17.5 bits;  conditional E-value: 2.8e-06
   PF13374.1   7 nLAlalrargryeeAlaleeealairrrllGddHP 41 
                 nLAl+ + +g++++A++l+e ++   +r  G+dHP
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARELLEIVVGGSERQNGPDHP 122
                 9*********************************9 PP

  == domain 4    score: -1.3 bits;  conditional E-value: 2.3
   PF13374.1   8 LAlalrargryeeA 21 
                 LA+ lr++ + +eA
  MMETSP1325-20131115|9462_1 131 LAICLRKLAEKAEA 144
                 67777777555555 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0017       1.5       7      25 ..       5      23 ..       1      24 [. 0.85
   2 !   12.0   0.0   0.00024       0.2       5      25 ..      45      65 ..      41      66 .. 0.88
   3 !   14.1   0.3   4.9e-05     0.041       6      25 ..      88     107 ..      86     107 .. 0.95
   4 ?    4.9   0.9     0.047        40       7      23 ..     138     154 .]     132     154 .] 0.80

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0017
                -HHHHHH-------HHHHH CS
   PF07721.9  7 LArallalGdldeAralle 25
                L+ ++ ++Gdld+Ar + e
  MMETSP1325-20131115|9462_1  5 LGTVMSEQGDLDAARKVYE 23
                899999********97666 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00024
                ---HHHHHH-------HHHHH CS
   PF07721.9  5 laLArallalGdldeAralle 25
                 +LA ++  +Gdld Ar+  e
  MMETSP1325-20131115|9462_1 45 GNLAIVMKKQGDLDGARQQYE 65
                69***************9987 PP

  == domain 3    score: 14.1 bits;  conditional E-value: 4.9e-05
                 --HHHHHH-------HHHHH CS
   PF07721.9   6 aLArallalGdldeAralle 25 
                 +LA +++++G+l +Ar+lle
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARELLE 107
                 8*****************98 PP

  == domain 4    score: 4.9 bits;  conditional E-value: 0.047
                 -HHHHHH-------HHH CS
   PF07721.9   7 LArallalGdldeAral 23 
                 LA+ + a Gd++eA+al
  MMETSP1325-20131115|9462_1 138 LAEKAEASGDAAEAAAL 154
                 66667799******997 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00041      0.35       5      26 ..       3      24 ..       1      30 [. 0.90
   2 !   14.9   0.0   1.9e-05     0.016       6      29 ..      46      69 ..      44      72 .. 0.94
   3 ?    5.7   0.0     0.016        14       6      25 ..      88     107 ..      86     109 .. 0.93
   4 ?    3.0   0.8      0.12     1e+02       6      29 ..     130     153 ..     126     154 .] 0.62

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00041
                HHHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12  5 ynlGlayyklgdyeeAleafek 26
                + lG +  ++gd++ A++ +e+
  MMETSP1325-20131115|9462_1  3 NTLGTVMSEQGDLDAARKVYEE 24
                689999***************8 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 1.9e-05
                HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAleafekAle 29
                nl+ +  k+gd++ A++ +e A++
  MMETSP1325-20131115|9462_1 46 NLAIVMKKQGDLDGARQQYEAAIR 69
                899*******************97 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.016
                 HHHHHHHHTT-HHHHHHHHH CS
  PF07719.12   6 nlGlayyklgdyeeAleafe 25 
                 nl+l+   +g+++ A+e++e
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARELLE 107
                 89***************986 PP

  == domain 4    score: 3.0 bits;  conditional E-value: 0.12
                 HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAle 29 
                 +l+ +++kl + +eA  +  +A +
  MMETSP1325-20131115|9462_1 130 RLAICLRKLAEKAEASGDAAEAAA 153
                 566666666666666666555554 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0012         1      37      59 ..       5      27 ..       1      34 [. 0.77
   2 !   22.5   0.0   1.4e-07   0.00012       9      63 ..      53     120 ..      46     122 .. 0.87
   3 ?    1.0   1.1      0.79   6.7e+02       3      18 ..     138     153 ..     127     154 .] 0.78

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0012
   PF13432.1 37 laeallrlgrldeAaallraala 59
                l+ +  ++g+ld+A++++++ ++
  MMETSP1325-20131115|9462_1  5 LGTVMSEQGDLDAARKVYEETVG 27
                78888888999999988888764 PP

  == domain 2    score: 22.5 bits;  conditional E-value: 1.4e-07
   PF13432.1   9 raGdydeAlaaleaalala.....Peaaeallllaeallrl...grldeAaallraal.....alaPd 63 
                 ++Gd+d A++++eaa++        e+++ l   + ++l +   g+l++A++ll+  +     +++Pd
  MMETSP1325-20131115|9462_1  53 KQGDLDGARQQYEAAIRVGertlgAEHPDTLIDKGNLALVMqlqGELQAARELLEIVVggserQNGPD 120
                 79*****************9999999*************555************99986666555555 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.79
   PF13432.1   3 lArallraGdydeAla 18 
                 lA+ + ++Gd +eA+a
  MMETSP1325-20131115|9462_1 138 LAEKAEASGDAAEAAA 153
                 6777888888888876 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0    0.0021       1.8       6      26 ..       4      24 ..       1      31 [. 0.88
   2 !   15.0   0.1   2.9e-05     0.025       6      32 ..      46      72 ..      42      85 .. 0.85
   3 ?    6.4   0.1     0.017        15       6      28 ..      88     110 ..      80     132 .. 0.79
   4 ?    2.0   0.6      0.47     4e+02       4      23 ..     135     154 .]     129     154 .] 0.80

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0021
   PF13428.1  6 alarallalGdpdeAiallrr 26
                 l+ ++ ++Gd+d+A++++++
  MMETSP1325-20131115|9462_1  4 TLGTVMSEQGDLDAARKVYEE 24
                68999**************98 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 2.9e-05
   PF13428.1  6 alarallalGdpdeAiallrralalaP 32
                 la+++  +Gd+d+A++++++a++ + 
  MMETSP1325-20131115|9462_1 46 NLAIVMKKQGDLDGARQQYEAAIRVGE 72
                699*******************98654 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.017
   PF13428.1   6 alarallalGdpdeAiallrral 28 
                  la ++  +G++++A++ll+ ++
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARELLEIVV 110
                 58999999***********9875 PP

  == domain 4    score: 2.0 bits;  conditional E-value: 0.47
   PF13428.1   4 llalarallalGdpdeAial 23 
                 l++la+  +a+Gd +eA+al
  MMETSP1325-20131115|9462_1 135 LRKLAEKAEASGDAAEAAAL 154
                 56788888999999999875 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0051       4.4       6      25 ..       5      24 ..       5      26 .. 0.89
   2 !    9.9   0.1    0.0011      0.92       5      28 ..      46      69 ..      46      70 .. 0.92
   3 !    7.6   0.0     0.006       5.1       5      27 ..      88     110 ..      88     111 .. 0.92
   4 ?    2.1   0.2      0.35     3e+02       5      20 ..     130     152 ..     130     154 .] 0.68

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0051
                HHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAlealer 25
                l+ ++ ++gd d+A++++e+
  MMETSP1325-20131115|9462_1  5 LGTVMSEQGDLDAARKVYEE 24
                68889999**********97 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0011
                HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  5 klalsyyklgdtdeAlealerlik 28
                +la +++k+gd d A++ +e  i+
  MMETSP1325-20131115|9462_1 46 NLAIVMKKQGDLDGARQQYEAAIR 69
                68999***************9885 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.006
                 HHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   5 klalsyyklgdtdeAlealerli 27 
                 +lal+++ +g+ ++A+e+le ++
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARELLEIVV 110
                 69*****************9875 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.35
                 HHHHHHHHH.......HHHHHHH CS
   PF13174.1   5 klalsyykl.......gdtdeAl 20 
                 +la +++kl       gd++eA 
  MMETSP1325-20131115|9462_1 130 RLAICLRKLaekaeasGDAAEAA 152
                 68999999646666666666665 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   4.1e-06    0.0035       7      66 ..       3      69 ..       1      72 [. 0.83
   2 !   12.4   0.1   9.4e-05      0.08       8      62 ..      46     107 ..      39     110 .. 0.70
   3 ?    3.5   1.3     0.056        48      10      64 ..      90     151 ..      87     154 .] 0.59

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 4.1e-06
   PF13414.1  7 kelGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAledyekAle 66
                + lG +  ++gd+d A + ye+ + l         +++ +   nlA +  k+g d + A++ ye A++
  MMETSP1325-20131115|9462_1  3 NTLGTVMSEQGDLDAARKVYEETVGLKealygaehSSTLVTKGNLAIVMKKQG-DLDGARQQYEAAIR 69
                689*********************996444454334455599***********.689*********97 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 9.4e-05
   PF13414.1   8 elGnalfkegdydeAieayekAle.....ldpnnaely...ynlAlaylklgkdyeeAledye 62 
                 +l+ +  k+gd+d+A ++ye A++     l  ++++ +    nlAl+ + +g+  ++A+e +e
  MMETSP1325-20131115|9462_1  46 NLAIVMKKQGDLDGARQQYEAAIRvgertLGAEHPDTLidkGNLALVMQLQGE-LQAARELLE 107
                 567777799**************933333456677766112567777777785.678877665 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.056
   PF13414.1  10 GnalfkegdydeAieayekAl.....eldpnnae...lyynlAlaylklgkdyeeAledyekA 64 
                 + +   +g+++ A e++e  +     +  p+++    +  +lA +++kl ++  eA  d+ +A
  MMETSP1325-20131115|9462_1  90 ALVMQLQGELQAARELLEIVVggserQNGPDHPFskfAKGRLAICLRKLAEK-AEASGDAAEA 151
                 5555556666666666666663333233466666666666788888888865.6777776666 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.027        23      17      34 .]       3      20 ..       2      20 .. 0.91
   2 !    7.8   0.0    0.0046       3.9      18      34 .]      46      62 ..      37      62 .. 0.95
   3 ?    5.7   0.0     0.021        18      18      34 .]      88     104 ..      78     104 .. 0.89
   4 ?   -0.4   0.0       1.8   1.6e+03      16      32 ..     135     151 ..     119     153 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.027
   PF13431.1 17 nnLAelllnnGdleeAeq 34
                n L+++ +++Gdl+ A++
  MMETSP1325-20131115|9462_1  3 NTLGTVMSEQGDLDAARK 20
                579*************96 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0046
   PF13431.1 18 nLAelllnnGdleeAeq 34
                nLA + +++Gdl+ A+q
  MMETSP1325-20131115|9462_1 46 NLAIVMKKQGDLDGARQ 62
                9**************98 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.021
   PF13431.1  18 nLAelllnnGdleeAeq 34 
                 nLA++ + +G+l+ A++
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARE 104
                 99*************85 PP

  == domain 4    score: -0.4 bits;  conditional E-value: 1.8
   PF13431.1  16 ynnLAelllnnGdleeA 32 
                 ++ LAe   + Gd +eA
  MMETSP1325-20131115|9462_1 135 LRKLAEKAEASGDAAEA 151
                 34455544566776666 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00052      0.44       7      31 ..       5      29 ..       2      32 .. 0.90
   2 !    6.3   0.0    0.0097       8.3       6      28 ..      46      68 ..      44      71 .. 0.91
   3 ?   -0.4   0.0       1.3   1.1e+03       6      25 ..      88     107 ..      81     111 .. 0.68
   4 ?   -2.8   0.0         8   6.8e+03      10      20 ..     134     144 ..     130     145 .. 0.53

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00052
                ---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1  7 lGdiYrqlGdydkAkeylekalelk 31
                lG ++ + Gd d+A + +e+ + lk
  MMETSP1325-20131115|9462_1  5 LGTVMSEQGDLDAARKVYEETVGLK 29
                789999**************99887 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.0097
                T---HHHHTT-HHHHHHHHH--- CS
   PF13181.1  6 nlGdiYrqlGdydkAkeylekal 28
                nl+ ++++ Gd d A + +e a+
  MMETSP1325-20131115|9462_1 46 NLAIVMKKQGDLDGARQQYEAAI 68
                788899**************998 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 1.3
                 T---HHHHTT-HHHHHHHHH CS
   PF13181.1   6 nlGdiYrqlGdydkAkeyle 25 
                 nl++++   G+  +A e le
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARELLE 107
                 56666666777777776665 PP

  == domain 4    score: -2.8 bits;  conditional E-value: 8
                 HHHHTT-HHHH CS
   PF13181.1  10 iYrqlGdydkA 20 
                 ++r+l ++ +A
  MMETSP1325-20131115|9462_1 134 CLRKLAEKAEA 144
                 55555555444 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.032        28       7      26 ..       5      24 ..       1      30 [. 0.79
   2 !    8.6   0.0    0.0015       1.3       6      29 ..      46      69 ..      43      71 .. 0.89
   3 ?    0.6   0.1       0.5   4.3e+02       6      23 ..      88     105 ..      86     107 .. 0.82
   4 ?    0.7   0.0      0.47     4e+02       5      20 ..     129     144 ..     126     147 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.032
                HHHHHHHTT-HHHHHHHHHH CS
  PF00515.23  7 lGnaylklgkydeAleyyek 26
                lG +  ++g++d A + ye+
  MMETSP1325-20131115|9462_1  5 LGTVMSEQGDLDAARKVYEE 24
                5555578***********98 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0015
                HHHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23  6 nlGnaylklgkydeAleyyekALe 29
                nl+ +  k+g++d A + ye A++
  MMETSP1325-20131115|9462_1 46 NLAIVMKKQGDLDGARQQYEAAIR 69
                7888889***************97 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.5
                 HHHHHHHHTT-HHHHHHH CS
  PF00515.23   6 nlGnaylklgkydeAley 23 
                 nl+++ + +g+++ A e 
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAAREL 105
                 78888899*****99886 PP

  == domain 4    score: 0.7 bits;  conditional E-value: 0.47
                 HHHHHHHHHTT-HHHH CS
  PF00515.23   5 ynlGnaylklgkydeA 20 
                  +l+ +++kl +  eA
  MMETSP1325-20131115|9462_1 129 GRLAICLRKLAEKAEA 144
                 689*****99887777 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0     0.003       2.5      10      33 ..      10      33 ..       3      36 .. 0.75
   2 ?    6.2   0.0      0.01         9       9      28 ..      51      70 ..      45      78 .. 0.72
   3 ?    2.9   0.0      0.12     1e+02       4      25 ..      88     109 ..      87     120 .. 0.76
   4 ?   -2.2   0.1       5.4   4.6e+03      10      19 ..     143     152 ..     131     154 .] 0.60

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.003
   PF13176.1 10 srlgdyekAielyeraLaltkdpl 33
                s++gd + A ++ye+  +l+++ +
  MMETSP1325-20131115|9462_1 10 SEQGDLDAARKVYEETVGLKEALY 33
                79************9666666555 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.01
   PF13176.1  9 ysrlgdyekAielyeraLal 28
                  ++gd + A + ye+a+++
  MMETSP1325-20131115|9462_1 51 MKKQGDLDGARQQYEAAIRV 70
                5689************6543 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.12
   PF13176.1   4 nLarlysrlgdyekAielyera 25 
                 nLa + + +g+ + A el+e  
  MMETSP1325-20131115|9462_1  88 NLALVMQLQGELQAARELLEIV 109
                 667776779**********984 PP

  == domain 4    score: -2.2 bits;  conditional E-value: 5.4
   PF13176.1  10 srlgdyekAi 19 
                 +++gd  +A+
  MMETSP1325-20131115|9462_1 143 EASGDAAEAA 152
                 4456666665 PP

>> PF07720.7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.074        63      14      26 ..      12      22 ..       8      23 .. 0.89
   2 ?    0.8   0.1      0.47     4e+02      14      26 ..      54      64 ..      53      69 .. 0.79
   3 !    8.6   0.0    0.0016       1.4       7      23 ..      89     105 ..      88     107 .. 0.92

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.074
                TT-HHHHHHH..H CS
   PF07720.7 14 kkkyqeArelfsY 26
                +++++ Ar++  Y
  MMETSP1325-20131115|9462_1 12 QGDLDAARKV--Y 22
                9*********..6 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.47
                TT-HHHHHHH..H CS
   PF07720.7 14 kkkyqeArelfsY 26
                +++++ Ar+   Y
  MMETSP1325-20131115|9462_1 54 QGDLDGARQQ--Y 64
                8999999988..4 PP

  == domain 3    score: 8.6 bits;  conditional E-value: 0.0016
                 HHHHHHHTT-HHHHHHH CS
   PF07720.7   7 lAaefynkkkyqeArel 23 
                 lA + ++++++q Arel
  MMETSP1325-20131115|9462_1  89 LALVMQLQGELQAAREL 105
                 799*************9 PP

>> PF09543.5  Protein of unknown function (DUF2379)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0      0.07        60      86     101 ..      10      25 ..       5      32 .. 0.84
   2 !   11.3   0.0   0.00026      0.22      72     104 ..      38      70 ..      28      73 .. 0.81
   3 ?   -1.7   0.0       2.7   2.3e+03      85     100 ..      93     108 ..      82     111 .. 0.74

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.07
   PF09543.5  86 rdagDldgArqelrev 101
                  ++gDld+Ar+  +e 
  MMETSP1325-20131115|9462_1  10 SEQGDLDAARKVYEET 25 
                 589*******988875 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00026
   PF09543.5  72 skrlvealtralrlrdagDldgArqelrevLav 104
                 s+ lv+    a+ ++++gDldgArq+ + ++ v
  MMETSP1325-20131115|9462_1  38 SSTLVTKGNLAIVMKKQGDLDGARQQYEAAIRV 70 
                 556666666788899***********9987665 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 2.7
   PF09543.5  85 lrdagDldgArqelre 100
                 ++ +g+l++Ar+ l+ 
  MMETSP1325-20131115|9462_1  93 MQLQGELQAARELLEI 108
                 5667888888887765 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.6   1.4e+03      71      83 ..      12      24 ..       4      49 .. 0.70
   2 !   14.3   0.0   3.5e-05      0.03       3      75 ..      62     139 ..      60     146 .. 0.77

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 1.6
                TT-HHHHCCCHHH CS
   PF12895.2 71 lgkydeAiavLek 83
                +g++d A++v+e+
  MMETSP1325-20131115|9462_1 12 QGDLDAARKVYEE 24
                4555555555554 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 3.5e-05
                 T-HHHHHHHHHHHCCC-ST-H.HHHCHHHHHHHHHH---HHHHHHHHHC......TSHCHCBHHHHHHHHHHHHHTT-HH CS
   PF12895.2   3 hnyknAlflaekllaespkdp.edaylyalAlclylngeykrAyellrk......leldssslgcryllArcllklgkyd 75 
                 ++y+ A+ ++e+ l  ++ d+  d   +  Al+++l+ge ++A ell+        ++ + ++ +++ ++r +++l k+ 
  MMETSP1325-20131115|9462_1  62 QQYEAAIRVGERTLGAEHPDTlIDKGNL--ALVMQLQGELQAARELLEIvvggseRQNGPDHPFSKFAKGRLAICLRKLA 139
                 79************99985656566666..*****************659988855555578888887777777777643 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.9   5.1e+03       7      18 ..      11      22 ..       6      29 .. 0.60
   2 !   14.4   0.1   2.6e-05     0.022       8      63 ..      61     122 ..      59     153 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 5.9
   PF13371.1  7 reedferALavv 18
                +++d ++A +v+
  MMETSP1325-20131115|9462_1 11 EQGDLDAARKVY 22
                445555555554 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.6e-05
   PF13371.1   8 eedferALavverllll.aPddpyerRDrGlllaqlgclaaAaedLeafl.....elcpdap 63 
                 ++++e+A++v er l   +Pd + +    +l+ + +g+l+aA+e Le  +     ++ pd+p
  MMETSP1325-20131115|9462_1  61 RQQYEAAIRVGERTLGAeHPDTLIDKGNLALVMQLQGELQAARELLEIVVggserQNGPDHP 122
                 799***********9888999999***********************988777666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 683.41
//
Query:       MMETSP1325-20131115|9463_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 833.28
//
Query:       MMETSP1325-20131115|9464_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1035  (0.0757022); expected 273.4 (0.02)
Passed bias filter:                      416  (0.0304272); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.41s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 589.50
//
Query:       MMETSP1325-20131115|9466_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|9469_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.42s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 337.45
//
Query:       MMETSP1325-20131115|9465_1  [L=301]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.33s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 1639.33
//
Query:       MMETSP1325-20131115|9461_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0055   16.2   0.0     0.0064   16.0   0.0    1.1  1  PF06295.7 Protein of unknown function (DUF1043)
  ------ inclusion threshold ------
       0.07   13.2   3.6      0.093   12.8   2.5    1.1  1  PF05615.8 Tho complex subunit 7
       0.17   11.6   2.8        0.4   10.4   1.9    1.7  1  PF04508.7 Viral A-type inclusion protein repeat
        1.8    8.0  10.6          2    7.8   7.3    1.0  1  PF06682.7 Protein of unknown function (DUF1183)
        1.8    7.7   7.2        2.1    7.5   5.0    1.1  1  PF05278.7 Arabidopsis phospholipase-like protein (PEARLI 4)


Domain annotation for each model (and alignments):
>> PF06295.7  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.3e-06    0.0064      22      64 ..      75     117 ..      55     121 .] 0.79

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.3e-06
   PF06295.7  22 kklkkqkkikkeLeeakaeleeqkkelkdhfaksaelletlak 64 
                   + +q++i +e+ e ka++e+  kel++  a+sa + e++a+
  MMETSP1325-20131115|9461_1  75 GMYAEQNRIAQEMGEEKAKMEQLEKELEESRARSAAMEERMAS 117
                 46889*******************************9999875 PP

>> PF05615.8  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.5   3.4e-05     0.093      81     116 ..      78     113 ..      74     120 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.4e-05
   PF05615.8  81 aekeeiektiealkdeieelrkeLeeaketrknrke 116
                 ae+ +i +++ + k ++e+l+keLee++++ + ++e
  MMETSP1325-20131115|9461_1  78 AEQNRIAQEMGEEKAKMEQLEKELEESRARSAAMEE 113
                 68899*************************999997 PP

>> PF04508.7  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.9   0.00015       0.4       1      19 [.      85     103 ..      85     107 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00015
   PF04508.7   1 rEldrlRrkIsdLekqLsd 19 
                 +E+ +++ k ++Lek+L++
  MMETSP1325-20131115|9461_1  85 QEMGEEKAKMEQLEKELEE 103
                 69***************98 PP

>> PF06682.7  Protein of unknown function (DUF1183)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   7.3   0.00073         2     198     307 ..       5     108 ..       1     118 [. 0.53

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00073
   PF06682.7 198 gggggGggggdlesangppppyfkssfpgsaglsakpssgygsagtrsqgeqgwrpGfWtGlaaGallGYllGsrraanrqyeesyssewgsas.ssrssssnssssssss 307
                 gg  gG +gg++   + ++  +  ++ ++    s    +g g + +++ +++g ++G+ +G+  G++lG   G+     +++++++++e+g+++ + ++ +++ ++s+  s
  MMETSP1325-20131115|9461_1   5 GGRAGGRRGGGFRARPTATKRG-ATEATK----SGGGAAGAGAQVHHHYHGGGGGGGLFSGMMLGSMLGGGHGNYGM--YAEQNRIAQEMGEEKaKMEQLEKELEESRARS 108
                 3333334566655555555555.222222....2333334444555666777779**************99999996..55555555544333302333333333333333 PP

>> PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   5.0   0.00078       2.1     207     243 ..      85     121 .]      78     121 .] 0.94

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00078
   PF05278.7 207 qEmekqekelaekEKeikevrekvtemaaklgelemk 243
                 qEm + ++++ + EKe++e r++   m+ ++++le k
  MMETSP1325-20131115|9461_1  85 QEMGEEKAKMEQLEKELEESRARSAAMEERMASLERK 121
                 9*********************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1195  (0.0874049); expected 273.4 (0.02)
Passed bias filter:                      770  (0.0563195); expected 273.4 (0.02)
Passed Vit filter:                       131  (0.00958163); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.41s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 604.08
//
Query:       MMETSP1325-20131115|9470_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       605  (0.044251); expected 273.4 (0.02)
Passed bias filter:                      472  (0.0345231); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.44s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 619.06
//
Query:       MMETSP1325-20131115|9474_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.72
# Mc/sec: 572.46
//
Query:       MMETSP1325-20131115|9476_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-16   58.0   0.0    7.3e-16   57.7   0.0    1.1  1  PF00266.14 Aminotransferase class-V


Domain annotation for each model (and alignments):
>> PF00266.14  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.0   5.3e-20   7.3e-16     133     371 .]      12     235 ..       8     235 .. 0.87

  Alignments for each domain:
  == domain 1    score: 57.7 bits;  conditional E-value: 5.3e-20
                 HHH--TTEEEEEEESB-S----.B--HHHHHHHHHH---EEEEE---STTTS---HHHHT-SEEE--------------EEE-HHHHHH----------EEE--S.---EE--TTGGG---------------HHHHH.HH---HHHHHHHHHHHHHHHHHHTTSTT-EEE-.-...TT----EEEE-----TTT---HHHH-.--B-B---TT-HHHHHHTT-S--EEE---TT--HHHHHHH CS
  PF00266.14 133 eklltpktklvaithvsnvtGv.vqpveeiaklakeagalvvvDaaqavghipidvkklgvDflafSgHKllgPtGiGvlyvrrellekleplklggemveevsl.eettfaeapskfeaGTpniagiiglgaaleyl.eeigleaiekhekelaeylyerLsalpgvellg.pakaerrasivsfafkgveaedvatlLder.gIavrsGhhcaqplmkrlalegtlRaSlyiynteeevdrl 371
                 e+ l+p++++ +i+ ++++ G+ ++ ++++       g+ +vvD+++ + + ++d + +gv   ++ + K++g +G++vl++rr+l+++       +   +++ + + +t  e+  + +  Tp ++ i+  g+++e++ +++g++++e+ + +++ ++++  +++ g++ +  + +a+r++  v f++ g + ++ + +L  + +  + +G ++     + ++  + lRaS+y  +t +e d+l
  MMETSP1325-20131115|9476_1  12 EWDLDPEASYRYICSNETINGTeFHTMPAFD-----DGVPLVVDMSSDIASKRLDWNLIGV--AFACAPKNIGHAGLTVLVIRRDLITER------TAQAACPGVlNWKTTYESAGMWN--TPATFNIYTTGKVMEWIlKQGGIDKMEDLAIRKSSAVMKVVDESGGFYGTPcSVVADRSRMNVPFNVFGGDVAATEAFLIGAyELNM-VGFRTK----TPFGYGKYLRASFYTGMTVDEADAL 235
                 68899*****************667777777.....9************************..889999*****************9988......3334555555666677777789*..**********************************************99865345677778888888899999999999999867776.478888....678999*************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.56
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|9477_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.41s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 171.17
//
Query:       MMETSP1325-20131115|9478_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-07   31.0  20.3    1.6e-07   31.0  14.1    1.8  2  PF00170.16 bZIP transcription factor
    0.00041   20.0  21.5    0.00041   20.0  14.9    2.1  2  PF07716.10 Basic region leucine zipper
  ------ inclusion threshold ------
       0.99    8.9   6.1       0.19   11.2   1.6    1.7  2  PF14077.1  Alternative WD40 repeat motif
        1.4    8.6   5.1        1.5    8.5   3.5    1.0  1  PF01935.12 Domain of unknown function DUF87
        2.5    7.0   9.5        2.5    7.0   6.6    1.0  1  PF13206.1  Trypanosomal VSG domain
        2.5    7.1   8.9       0.48    9.4   3.7    1.5  2  PF04157.11 EAP30/Vps36 family
        5.4    6.5   6.6        2.8    7.5   2.7    1.7  2  PF03233.8  Aphid transmission protein
        5.9    6.5  18.1        7.7    6.1  12.5    1.1  1  PF08524.6  rRNA processing


Domain annotation for each model (and alignments):
>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.67   1.1e+03      20      26 ..      31      37 ..      28      45 .. 0.61
   2 !   31.0  14.1   9.3e-11   1.6e-07       2      50 ..      44      92 ..      43      95 .. 0.94

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.67
                HHHHHHH CS
  PF00170.16 20 sRqRKka 26
                 R+RK++
  MMETSP1325-20131115|9478_1 31 TRKRKLE 37
                4666654 PP

  == domain 2    score: 31.0 bits;  conditional E-value: 9.3e-11
                XXXCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......H CS
  PF00170.16  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                +e++ +r +++NRe Arr R+RKka++eeL+++++eLe+e++ L ++le
  MMETSP1325-20131115|9478_1 44 EEDRLQRSRERNREHARRTRLRKKARLEELKNRAAELEEERRNLTQKLE 92
                58899***************************************98886 PP

>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.9      0.25   4.3e+02      19      32 ..      31      44 ..      28      51 .. 0.70
   2 !   20.0  14.9   2.4e-07   0.00041       5      50 ..      47      93 ..      44      96 .] 0.88

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.25
  PF07716.10 19 sRekkkakeeelee 32
                +R++k + e++ +e
  MMETSP1325-20131115|9478_1 31 TRKRKLEAEADAME 44
                57777777766655 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 2.4e-07
  PF07716.10  5 yrerRr.rNreAArrsRekkkakeeeleervkeLeeeNaqLrqkveq 50
                + +r r rNre Arr+R +kka+ eel++r+ eLeee   L qk+e 
  MMETSP1325-20131115|9478_1 47 RLQRSReRNREHARRTRLRKKARLEELKNRAAELEEERRNLTQKLED 93
                5566556************************************9985 PP

>> PF14077.1  Alternative WD40 repeat motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       2.2   3.8e+03      14      23 ..      29      38 ..      22      42 .. 0.63
   2 ?   11.2   1.6   0.00011      0.19      14      30 ..      71      87 ..      68      92 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 2.2
   PF14077.1 14 eqlrvRvsEL 23
                +++r R  E 
  MMETSP1325-20131115|9478_1 29 DETRKRKLEA 38
                5556665554 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00011
   PF14077.1 14 eqlrvRvsELEeEvrtl 30
                e+l+ R +ELEeE r+l
  MMETSP1325-20131115|9478_1 71 EELKNRAAELEEERRNL 87
                89*************98 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.5   0.00085       1.5     137     196 ..      21      92 ..       6      96 .] 0.75

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00085
  PF01935.12 137 eklssdepveklleelk............kekeelrklknqairrlldklerllrkggsfsnsstdlialll 196
                 e+ ++de++e  + +l+            +++e +r+++++++ r++ +le+l+++ ++  ++  +l+++l+
  MMETSP1325-20131115|9478_1  21 EEDTVDESDETRKRKLEaeadameedrlqRSRERNREHARRTRLRKKARLEELKNRAAELEEERRNLTQKLE 92 
                 3445555666666666677777777777788899************************99888888888874 PP

>> PF13206.1  Trypanosomal VSG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   6.6    0.0015       2.5      74     146 ..       9      92 ..       1      96 [] 0.65

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0015
   PF13206.1  74 etddetwgekkkkkak.........akWkaaakalkkkakekeekkssnsslstaakqkak..qlaekAaklkeeiektrtkal 146
                 ++++et ge+++++ +          k +a a+a+++++ +++ ++  + + +t+ ++ka+  +l ++Aa+l ee ++ ++k +
  MMETSP1325-20131115|9478_1   9 NNTQETNGENASEEDTvdesdetrkRKLEAEADAMEEDRLQRSRERNREHARRTRLRKKARleELKNRAAELEEERRNLTQKLE 92 
                 444444444444444444443444477777777777766666777777777777777777788*********999998877755 PP

>> PF04157.11  EAP30/Vps36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.55   9.4e+02      12      40 ..      17      45 ..      10      47 .. 0.72
   2 ?    9.4   3.7   0.00028      0.48       5      52 ..      47      94 ..      45      96 .] 0.94

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.55
                ----------TTTHHHHHHHHHHHHHHHH CS
  PF04157.11 12 qqrkendlgaqialedleqlmkqakelve 40
                + + e+d++ ++ +++  +l++ a+ ++e
  MMETSP1325-20131115|9478_1 17 ENASEEDTVDESDETRKRKLEAEADAMEE 45
                56667777777888888888888887775 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.00028
                ---..------------TTTHHHHHHHHHHHHHHHHHHHHHHHHGGGG CS
  PF04157.11  5 gieqsreqqrkendlgaqialedleqlmkqakelvelleslakkhkke 52
                ++++sre  r+ ++++  ++  +le+l+++a el+e  ++l +k+++ 
  MMETSP1325-20131115|9478_1 47 RLQRSRERNREHARRTRLRKKARLEELKNRAAELEEERRNLTQKLEDR 94
                699*****************************************9986 PP

>> PF03233.8  Aphid transmission protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.5      0.23   3.9e+02     102     133 ..      14      46 ..       5      56 .. 0.65
   2 ?    7.5   2.7    0.0017       2.8      99     136 ..      56      93 ..      24      96 .] 0.67

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.23
   PF03233.8 102 dkekktklletLkeaqn.rikkleeetkklaek 133
                  + +++ + +t+ e+++ r +kle e   ++e+
  MMETSP1325-20131115|9478_1  14 TNGENASEEDTVDESDEtRKRKLEAEADAMEED 46 
                 333445556667776666888888887777664 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0017
   PF03233.8  99 ggedkekktklletLkeaqnrikkleeetkklaekivt 136
                  ++ +  ++++   L+e +nr  +leee ++l++k++ 
  MMETSP1325-20131115|9478_1  56 REHARRTRLRKKARLEELKNRAAELEEERRNLTQKLED 93 
                 33334455667789********************9985 PP

>> PF08524.6  rRNA processing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  12.5    0.0045       7.7      53     123 ..      16      90 ..       5      94 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0045
   PF08524.6  53 pEkesaekkekkikedrklekKkkld....ekkeikkerkreqkekkeakvqkrlekiekkqkeRerrrkklskk 123
                 +E+ s+e+++ ++ e rk +   + d    ++ ++++er re+  ++  ++++rle+++++  e e+ r++l++k
  MMETSP1325-20131115|9478_1  16 GENASEEDTVDESDETRKRKLEAEADameeDRLQRSRERNREHARRTRLRKKARLEELKNRAAELEEERRNLTQK 90 
                 45555555555555544443333333444577788888888888888889999********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1717  (0.125585); expected 273.4 (0.02)
Passed bias filter:                      755  (0.0552224); expected 273.4 (0.02)
Passed Vit filter:                       131  (0.00958163); expected 13.7 (0.001)
Passed Fwd filter:                        28  (0.00204798); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.54u 0.45s 00:00:00.99 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|9479_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|9472_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.51
# Mc/sec: 1353.24
//
Query:       MMETSP1325-20131115|9481_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.28    8.8   5.9       0.32    8.7   4.1    1.2  1  PF05642.6 Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   4.1   2.3e-05      0.32     106     169 ..      14      84 ..       4     125 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 2.3e-05
   PF05642.6 106 neddkGsk..edseedddeeeeednkst....sskdgk.gskkaqpgvssssgsttsqtdlstklsqtglg 169
                 n+d +G++  +d e+ ddee+ e  +st     s  gk ++  a p+++   +st+++t++st+l q +  
  MMETSP1325-20131115|9481_1  14 NKDADGDSdnSDGEDADDEEDTEVRRSTwgmrWSITGKdDAAEADPSLELEMTSTSTSTSTSTNLGQHNPM 84 
                 34444444004444444555556667774444244555156677999999999999999999998887643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 579.48
//
Query:       MMETSP1325-20131115|9482_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.61
# Mc/sec: 675.69
//
Query:       MMETSP1325-20131115|9484_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-14   50.7   0.0    7.2e-14   50.6   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.6   0.0   5.2e-18   7.2e-14     368     436 ..       3      72 ..       1      75 [] 0.87

  Alignments for each domain:
  == domain 1    score: 50.6 bits;  conditional E-value: 5.2e-18
  PF03028.10 368 sfkvPek.keyeeyleyiee.LpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksr 436
                  f++P++ k+ye++l +ie+ L+  + P ++GLh+Naei+f+t+++e+l++t+l+l p++  + eg ++s+
  MMETSP1325-20131115|9484_1   3 RFNAPQTsKSYENVLDHIEQkLQGDS-PLAFGLHPNAEIGFRTEQSENLFKTILDLSPQDVMSGEGGSSSQ 72 
                 68899985789*********888887.********************************999866666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|9486_1  [L=454]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   12.6   0.9          1    9.0   0.0    2.5  2  PF07506.6 RepB plasmid partitioning protein


Domain annotation for each model (and alignments):
>> PF07506.6  RepB plasmid partitioning protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.2     0.018   2.4e+02     101     163 ..       4      65 ..       1      71 [. 0.73
   2 ?    9.0   0.0   7.6e-05         1      73     125 ..     143     195 ..     126     206 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.018
   PF07506.6 101 lsdtrfsqLvkilrpkkdkrvsaksaarpeaksarlqtavlaiiedegrqtLalkaaeaylsr 163
                  + tr +++  +  pk++k++ +++aar ++  a+ +  v++ i+ +g+ +L+ +  +  l++
  MMETSP1325-20131115|9486_1   4 QAETRPNAVSAPPVPKRKKGPAKQTAAR-KRPRASGDLWVRRSIRASGQGMLQSRNLNELLDK 65 
                 5678888888877799*****9966665.5666666778999999999999887776666555 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 7.6e-05
   PF07506.6  73 kigrarwvelaellaaakavesayfrallsdtrfsqLvkilrpkkdkrvsaks 125
                  i +a w+e a  l+a +++   + ++ +s+ + + +++i+r+++ k+ + +s
  MMETSP1325-20131115|9486_1 143 RITPAAWNEFANSLLATNVTHMYASEHVISAEQKTRMRDIIRANRSKHSRHNS 195
                 6899**********99999999999********************99987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.55
# Mc/sec: 1978.08
//
Query:       MMETSP1325-20131115|9488_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 581.97
//
Query:       MMETSP1325-20131115|9490_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.52
# Mc/sec: 1239.65
//
Query:       MMETSP1325-20131115|9492_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 381.64
//
Query:       MMETSP1325-20131115|9487_1  [L=605]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-59  201.9   8.8    1.4e-59  201.4   6.1    1.1  1  PF01270.12 Glycosyl hydrolases family 8
  ------ inclusion threshold ------
      0.053   13.3   0.2      0.098   12.4   0.1    1.4  1  PF01034.15 Syndecan domain


Domain annotation for each model (and alignments):
>> PF01270.12  Glycosyl hydrolases family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.4   6.1     2e-63   1.4e-59      20     341 ..     165     492 ..     155     493 .. 0.85

  Alignments for each domain:
  == domain 1    score: 201.4 bits;  conditional E-value: 2e-63
                 XXTTHHHHHHHHHHHHHB----..-B-BTTSTT-EEE--------HHHHHTT-HHHHHHHHHHHHHHCB-TTTS-B-SEE---TTSSS---S------HHHHHHHHH---TT--HHHHHHHHHHHHHHHHHCCHEE--.EEE-------BESSEEEE-CCCS-HHHHHHHHCCH--THHHHHHHHHHHHHHHT-..B..--B--SSEEEE..TT--E.......EES--TTSEESTTTCHHHHHHHHTTTT.SHHHHHHHHHCHH.HHHHHHH-----SEEES----EESS-.----HHHHHHH--SHHHH.HHHHCGG-S..-SHHHHHHHHHHHHHCC CS
  PF01270.12  20 sasaannaaweqfkskylktdg..rvidtangnkdtvsEGqgYgMllavaaadraaFdnLykwtkanlsstnekLmaWrvnkskknkvedknsAtDGDlliAysLllAgkqwgsgrynylkeakniiiaiknvvveagrvvLlpGdvgfkkddsvalnpSyfvlpalrafaertgdkrWrnviddlyellselr..sgktgLvpDwvaln..adpas.......adaleypyrasydaiRialyysmygds.akaksdalasfkk.gnpsnikdgyklegvdvstgktatyvapfgllavtdstlqerlas.elaklkdas..edyysdslkLlvmlart 341
                 s   ++++ ++ + +ky+ + g  + ++ + +++d vsEG gYgMl+a+ ++d++ Fd+L+ +++ +     ++Lm W++ +  ++ v + +sA+DGD+++A+ L+ A  +wg     yl++a + i++i++  +  ++   lpGd ++ +d     npSyf+  ++r+f e+tgd++W   i ++y++l++ +  ++ tgLvpDw       +p+s       a+ ++y+y+a ++++R a++y++  +s ak + + +a+f++   ps + +g + +g+ ++ +    +v+ +  + ++++       +  ++ l+d +  ++y+ d+l+L+++++++
  MMETSP1325-20131115|9487_1 165 S---QVASWYATWAAKYIVNLGsgKCVQRIGQGNDCVSEGTGYGMLMAAWMDDQTNFDGLWAFAQEHFD--DNGLMNWQISSG-NSVVGA-GSAADGDIDMALGLVMAAEKWG---GSYLSDATTLINNIMAHEIDSSTHSVLPGDSWDVSD--PPYNPSYFAPGHFRIFEEVTGDSQWSSAITQGYSILTDCAnyNSGTGLVPDWSQDLssCNPGSnwvswtlANGADYYYDAVRTPWRLAIDYAWSCNSkAKSAVKSMATFFAnQGPSGMGQGFTISGSSLGYSVNTCFVSTASTAIIASPSSSSSTRNdWWDYLEDMNqeNSYFCDTLQLMMYIFDS 492
                 3...334459*********9888888888888899999******************************9..9*******9765.666666.8*********************...679*******************9*************..8889*****99***************************998899********87433444433111111145566*******************9999************9999***********************9555544444444444333314444544445579************987 PP

>> PF01034.15  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.4e-05     0.098       7     132 ..       8     145 ..       4     172 .. 0.57

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.4e-05
  PF01034.15   7 pllllalaaqaalaaraaaeepderyvd..eegSgdddeieddeldDeysGSGsga............................................tpsddedaepvtasahapkltetssspssetttaststktsstvsttttattsPsetateeatttvatetat 132
                 + +ll+ +a + +a+  +  +++ +  d  ++gS++  ++  +e   + +G G g+                                             p+  ++++p  a                                   t++++Ps t++++++ t+++ t++
  MMETSP1325-20131115|9487_1   8 WAILLLCRASVESANPREHFGKHAERGDlrLRGSSGSIGNSLQEARNDTDGYGEGSgciaewqtcsvdddhaiaccdgltcvvksdyyaqckssgpspanNPTHRPSPMPSPA----------------------------------PTHVPHPSPTKAPTKSGTTPSPTPK 145
                 66777888899999999999999888888888888554443333333333333333445577776555554444444444444444444444444444444444444444444..................................4455566666555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.96u 0.39s 00:00:01.35 Elapsed: 00:00:00.60
# Mc/sec: 2416.33
//
Query:       MMETSP1325-20131115|9493_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-05   21.4   0.0     0.0001   21.0   0.0    1.1  1  PF14323.1 GxGYxY sequence motif in domain of unknown function


Domain annotation for each model (and alignments):
>> PF14323.1  GxGYxY sequence motif in domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   7.6e-09    0.0001       2     144 ..      66     233 ..      65     241 .. 0.76

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 7.6e-09
                 HHHH---HHH---EEEEE----..........HHHHHHHHHHH...--.--EEE..ESSHHHHHHHHHH........-----EEE--TT---HHHHHHHH-------EE...EGGGHHHHHH-------EE-TT.--HHHHHHHHGGGS-SSEEEE--TT..--SSSHHHHH CS
   PF14323.1   2 latLqGlvnrtkpriylvedes..........deewlkklkek...lg.lkyke..vndkwellakyks........eikGlvvydpevkdsslnvAttiAglenaivv...teslesklkkagiklkleDlrgrfdeqwlydnYwkrlnksliielspe..klgalrdyai 144
                 l+tL G+ +rt priy+ ++++          + +wl +l+++   ++ +k++e  ++d   ll++ ++         ++G v ydp +  +s+n A  +++ ++a v    + + +s l ++gi   + D+ +++ ++ l+    + l+ +++i + ++  + + l d a+
  MMETSP1325-20131115|9493_1  66 LQTLAGVLARTTPRIYTLTADPsrvedpksdpSVFWLGQLQSDassYNyIKFDEtyLHDFLGLLEHVATmpaddgtrIVDGFVRYDPTT--NSTNAALIVCAASDATVLavgNAATASFLSELGI-PMVADVSSETPYDALMGAL-DGLSDRVAIFQPDNgnNAMYLSDFAV 233
                 89**************87766668999*998878999999988666667999999999*******99876666666579*********5..99******99999986542234567788999999.6688999977777666654.55666666655543114456666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.54
# Mc/sec: 1131.61
//
Query:       MMETSP1325-20131115|9495_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-10   40.7   0.0    8.1e-10   38.3   0.0    1.8  1  PF05724.6 Thiopurine S-methyltransferase (TPMT)


Domain annotation for each model (and alignments):
>> PF05724.6  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   5.9e-14   8.1e-10      98     159 ..      20      77 ..       9     129 .] 0.80

  Alignments for each domain:
  == domain 1    score: 38.3 bits;  conditional E-value: 5.9e-14
                 .....B.-TTTSTTTT-..ECEEEEESSCCCS-HHHHHHHHHHHHHHC-SEEE.EEEEECS- CS
   PF05724.6  98 eiellcgdvFtlraeelgkfdliydraalvAlppelreryakslaelLkpdgeglLvtldyp 159
                 + ++  gd+F ++a   g+f+l yd  +l+A+pp+ r+++a++ aelL ++ge  Lvtl  p
  MMETSP1325-20131115|9495_1  20 RANVEVGDFFSMDA--PGSFQLGYDCTFLCAIPPASRQAWASKWAELLAEGGE--LVTLIFP 77 
                 456668****9665..677**********************************..9998654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 657.72
//
Query:       MMETSP1325-20131115|9496_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 617.52
//
Query:       MMETSP1325-20131115|9494_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   15.6   0.2      0.026   14.4   0.1    1.6  1  PF10570.4 Myelin-PO cytoplasmic C-term p65 binding region


Domain annotation for each model (and alignments):
>> PF10570.4  Myelin-PO cytoplasmic C-term p65 binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   1.9e-06     0.026       8      35 ..      56      83 ..      52      88 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.9e-06
   PF10570.4  8 rqavlqRrlsAlErGklskkakdaskrs 35
                 q  l Rr s +ErG +  +++++ kr+
  MMETSP1325-20131115|9494_1 56 AQKELERRISRMERGAVADTGGTVTKRG 83
                58899**********************4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       722  (0.0528087); expected 273.4 (0.02)
Passed bias filter:                      465  (0.0340111); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.37s 00:00:01.02 Elapsed: 00:00:00.50
# Mc/sec: 1385.09
//
Query:       MMETSP1325-20131115|9489_1  [L=656]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-54  179.4  19.9      4e-16   58.2   0.5    6.3  6  PF13414.1  TPR repeat
    4.6e-32  108.1  31.2    0.00018   20.8   0.4    9.6  9  PF00515.23 Tetratricopeptide repeat
    1.9e-30  102.1  24.8    0.00064   19.3   0.3   10.1 10  PF07719.12 Tetratricopeptide repeat
    1.6e-20   72.6  13.9    1.8e-05   24.4   0.0    6.4  7  PF13424.1  Tetratricopeptide repeat
    3.4e-20   70.5  11.1     0.0061   16.9   0.1    8.9  8  PF13428.1  Tetratricopeptide repeat
    4.3e-20   69.8  24.3       0.13   12.0   0.0    9.4  9  PF13181.1  Tetratricopeptide repeat
    1.9e-19   69.7  20.0    6.6e-06   26.5   0.1    6.1  5  PF13432.1  Tetratricopeptide repeat
    5.8e-19   66.5   9.2    0.00085   19.2   0.1    7.4  7  PF13431.1  Tetratricopeptide repeat
    2.1e-14   53.0   0.3     0.0019   17.8   0.0    4.6  4  PF13371.1  Tetratricopeptide repeat
    5.3e-14   50.7  16.0       0.74    9.6   0.0    8.6  8  PF13176.1  Tetratricopeptide repeat
    1.7e-08   34.3  14.6      0.018   15.0   0.1    5.2  5  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
     0.0034   16.5   2.5      0.013   14.5   0.1    2.5  3  PF04733.9  Coatomer epsilon subunit
     0.0038   16.9  10.0        1.4    8.8   0.0    5.7  6  PF13374.1  Tetratricopeptide repeat
      0.005   17.1  19.6        1.8    9.0   0.0    7.6  8  PF13174.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.055   13.2  16.1        3.8    7.3   0.1    6.4  6  PF04212.13 MIT (microtubule interacting and transport) domain
        1.3    8.5   6.2       0.14   11.6   0.3    2.3  3  PF00637.15 Region in Clathrin and VPS


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   7.3e-15   6.3e-12      13      69 .]       2      57 ..       1      57 [. 0.93
   2 !   16.7   0.1   4.5e-06    0.0038       6      49 ..      63     106 ..      58     111 .. 0.89
   3 !   43.5   0.4   1.9e-14   1.6e-11       3      66 ..     221     283 ..     219     290 .. 0.89
   4 !    6.1   0.0     0.009       7.7       3      29 ..     297     327 ..     295     340 .. 0.74
   5 !   58.2   0.5   4.7e-19     4e-16       4      69 .]     362     426 ..     359     426 .. 0.97
   6 !   20.1   0.1   3.7e-07   0.00032       6      46 ..     432     472 ..     428     491 .. 0.90

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 7.3e-15
   PF13414.1 13 lfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69
                ++++g++deAi++y++A+ ld +n + y+n+++ayl +g d e+A+ d +k++   P
  MMETSP1325-20131115|9489_1  2 ALQAGEFDEAIAHYTEAIGLDGSNHVFYSNRSAAYLSKG-DAESAMSDGDKCITMKP 57
                6899***********************************.68******999997665 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 4.5e-06
   PF13414.1   6 lkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylk 49 
                 + ++G al k+++ydeA + y+ +le +p +  l  +lA ++  
  MMETSP1325-20131115|9489_1  63 YGRKGAALHKLKRYDEAAAVYNAGLEACPGDKALTDGLATVLKD 106
                 6789*****************************99999999876 PP

  == domain 3    score: 43.5 bits;  conditional E-value: 1.9e-14
   PF13414.1   3 AealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66 
                  ++l+e+Gn ++k++++++A+++y+   e dp+  ++++n A++y+++  ++++A + +  A+e
  MMETSP1325-20131115|9489_1 221 IKTLREQGNTHYKAKEFEQALQCYDSVFEQDPEQVSVLNNKAAVYMEMK-EWKQAEKTLADAIE 283
                 6789********************************************7.57999888777776 PP

  == domain 4    score: 6.1 bits;  conditional E-value: 0.009
   PF13414.1   3 AealkelGnalfkeg....dydeAieayekA 29 
                 A+ + + G ++ +++    +++ Aie+yekA
  MMETSP1325-20131115|9489_1 297 AKMYVRWGKVYANKKnpemNLATAIEYYEKA 327
                 6678888888888773444589999999998 PP

  == domain 5    score: 58.2 bits;  conditional E-value: 4.7e-19
   PF13414.1   4 ealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                 +++ke+Gn +f+++d+  Ai++ye+A++ dp+n+ + +nlA+++ k   d++ A+ ++ekAleldP
  MMETSP1325-20131115|9489_1 362 LEAKERGNDAFRAQDWPTAIKEYEEAIKRDPKNPAYNNNLAATLCKIM-DFQGAMSACEKALELDP 426
                 679*******************************************98.7***************9 PP

  == domain 6    score: 20.1 bits;  conditional E-value: 3.7e-07
   PF13414.1   6 lkelGnalfkegdydeAieayekAleldpnnaelyynlAla 46 
                   ++G   f +++y++A+e y+k+l+++ +n  +  +lA++
  MMETSP1325-20131115|9489_1 432 IARKGDIEFLRKEYHKALETYQKGLAIEADNKACKDGLAKT 472
                 6789***************************9999999987 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   9.5e-06    0.0081      12      33 ..       3      24 ..       2      25 .. 0.88
   2 ?   -1.1   0.0       1.7   1.5e+03       9      32 ..      34      57 ..      28      58 .. 0.68
   3 !   20.5   0.3   2.6e-07   0.00022       2      33 ..      61      92 ..      60      93 .. 0.93
   4 !   20.3   0.0     3e-07   0.00026       4      33 ..     224     253 ..     221     254 .. 0.89
   5 !   12.5   0.1   8.6e-05     0.073       3      29 ..     257     283 ..     255     286 .. 0.86
   6 ?    3.7   1.3     0.052        44      16      27 ..     316     327 ..     297     329 .. 0.81
   7 !   13.2   0.0   5.2e-05     0.045       7      34 .]     367     394 ..     365     394 .. 0.94
   8 !   20.8   0.4   2.1e-07   0.00018       5      34 .]     399     428 ..     396     428 .. 0.97
   9 !   15.5   0.2     1e-05    0.0088       2      33 ..     430     461 ..     429     462 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 9.5e-06
                HHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23 12 lklgkydeAleyyekALelnPn 33
                l+ g++deA+++y +A+ l+ +
  MMETSP1325-20131115|9489_1  3 LQAGEFDEAIAHYTEAIGLDGS 24
                578**************99976 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 1.7
                HHHHHTT-HHHHHHHHHHHHHHHT CS
  PF00515.23  9 naylklgkydeAleyyekALelnP 32
                +ayl++g+ + A  + +k+++  P
  MMETSP1325-20131115|9489_1 34 AAYLSKGDAESAMSDGDKCITMKP 57
                688888888888777666666666 PP

  == domain 3    score: 20.5 bits;  conditional E-value: 2.6e-07
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALelnPn 33
                k + ++G+a++kl++ydeA + y+  Le  P 
  MMETSP1325-20131115|9489_1 61 KGYGRKGAALHKLKRYDEAAAVYNAGLEACPG 92
                789************************99986 PP

  == domain 4    score: 20.3 bits;  conditional E-value: 3e-07
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23   4 lynlGnaylklgkydeAleyyekALelnPn 33 
                 l   Gn+++k +++++Al++y+ + e +P+
  MMETSP1325-20131115|9489_1 224 LREQGNTHYKAKEFEQALQCYDSVFEQDPE 253
                 5567***********************996 PP

  == domain 5    score: 12.5 bits;  conditional E-value: 8.6e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF00515.23   3 alynlGnaylklgkydeAleyyekALe 29 
                 +l+n++++y++++++++A++    A+e
  MMETSP1325-20131115|9489_1 257 VLNNKAAVYMEMKEWKQAEKTLADAIE 283
                 79****************997766665 PP

  == domain 6    score: 3.7 bits;  conditional E-value: 0.052
                 -HHHHHHHHHHH CS
  PF00515.23  16 kydeAleyyekA 27 
                 ++  A+eyyekA
  MMETSP1325-20131115|9489_1 316 NLATAIEYYEKA 327
                 4567*******9 PP

  == domain 7    score: 13.2 bits;  conditional E-value: 5.2e-05
                 HHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   7 lGnaylklgkydeAleyyekALelnPnn 34 
                 +Gn  ++ +++  A++ ye+A++ +P+n
  MMETSP1325-20131115|9489_1 367 RGNDAFRAQDWPTAIKEYEEAIKRDPKN 394
                 89999*********************98 PP

  == domain 8    score: 20.8 bits;  conditional E-value: 2.1e-07
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   5 ynlGnaylklgkydeAleyyekALelnPnn 34 
                 +nl++++ k  +++ A  ++ekALel+P++
  MMETSP1325-20131115|9489_1 399 NNLAATLCKIMDFQGAMSACEKALELDPKY 428
                 8***************************97 PP

  == domain 9    score: 15.5 bits;  conditional E-value: 1e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekALelnPn 33 
                 ka  ++G + +  ++y +Ale y+k L ++ +
  MMETSP1325-20131115|9489_1 430 KAIARKGDIEFLRKEYHKALETYQKGLAIEAD 461
                 677899*********************99766 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   6.2e-05     0.053      12      32 ..       3      23 ..       1      25 [. 0.87
   2 ?    4.5   0.0     0.041        35       4      33 ..      29      58 ..      27      59 .. 0.91
   3 !   19.3   0.3   7.5e-07   0.00064       2      34 .]      61      93 ..      60      93 .. 0.93
   4 !   17.7   0.0   2.4e-06    0.0021       3      33 ..     223     253 ..     221     254 .. 0.92
   5 !    9.5   0.1     0.001      0.87       3      30 ..     257     284 ..     255     287 .. 0.91
   6 ?    0.3   0.0      0.93   7.9e+02       2      18 ..     298     314 ..     297     315 .. 0.86
   7 ?    3.4   0.1     0.091        78      16      28 ..     316     328 ..     316     333 .. 0.82
   8 !   18.4   0.1   1.4e-06    0.0012       6      34 .]     366     394 ..     363     394 .. 0.95
   9 !   13.8   0.1   4.3e-05     0.037       2      34 .]     396     428 ..     395     428 .. 0.91
  10 !   10.9   0.2   0.00036      0.31       3      32 ..     431     460 ..     429     462 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 6.2e-05
                HHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12 12 yklgdyeeAleafekAleldP 32
                +++g+++eA++++ +A+ ld 
  MMETSP1325-20131115|9489_1  3 LQAGEFDEAIAHYTEAIGLDG 23
                789*************98875 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.041
                HHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  4 lynlGlayyklgdyeeAleafekAleldPn 33
                + n+  ay+ +gd e A  + +k++   P+
  MMETSP1325-20131115|9489_1 29 YSNRSAAYLSKGDAESAMSDGDKCITMKPD 58
                899***************999999998887 PP

  == domain 3    score: 19.3 bits;  conditional E-value: 7.5e-07
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldPnn 34
                +++ + G a+ kl++y+eA++ ++  le +P++
  MMETSP1325-20131115|9489_1 61 KGYGRKGAALHKLKRYDEAAAVYNAGLEACPGD 93
                68999*************************986 PP

  == domain 4    score: 17.7 bits;  conditional E-value: 2.4e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                  l ++G+ +yk++++e+Al++++ + e dP+
  MMETSP1325-20131115|9489_1 223 TLREQGNTHYKAKEFEQALQCYDSVFEQDPE 253
                 68899*********************99996 PP

  == domain 5    score: 9.5 bits;  conditional E-value: 0.001
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAlel 30 
                 +l+n + +y++++++++A++ +  A+e 
  MMETSP1325-20131115|9489_1 257 VLNNKAAVYMEMKEWKQAEKTLADAIEA 284
                 799*****************99999985 PP

  == domain 6    score: 0.3 bits;  conditional E-value: 0.93
                 HHHHHHHHHHHHTT-HH CS
  PF07719.12   2 ealynlGlayyklgdye 18 
                 + + ++G++y++++++e
  MMETSP1325-20131115|9489_1 298 KMYVRWGKVYANKKNPE 314
                 67899********9986 PP

  == domain 7    score: 3.4 bits;  conditional E-value: 0.091
                 -HHHHHHHHHHHH CS
  PF07719.12  16 dyeeAleafekAl 28 
                 +++ A+e++ekA 
  MMETSP1325-20131115|9489_1 316 NLATAIEYYEKAQ 328
                 5678*******96 PP

  == domain 8    score: 18.4 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   6 nlGlayyklgdyeeAleafekAleldPnn 34 
                 ++G+ +++++d+  A++ +e+A++ dP+n
  MMETSP1325-20131115|9489_1 366 ERGNDAFRAQDWPTAIKEYEEAIKRDPKN 394
                 69*************************97 PP

  == domain 9    score: 13.8 bits;  conditional E-value: 4.3e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                  +++nl+  + k  d++ A  a+ekAleldP++
  MMETSP1325-20131115|9489_1 396 AYNNNLAATLCKIMDFQGAMSACEKALELDPKY 428
                 57899999999999*****************85 PP

  == domain 10    score: 10.9 bits;  conditional E-value: 0.00036
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  PF07719.12   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 a  + G++ + +++y +Ale ++k l+++ 
  MMETSP1325-20131115|9489_1 431 AIARKGDIEFLRKEYHKALETYQKGLAIEA 460
                 56789*********************9875 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0016       1.4      17      67 ..       4      47 ..       2      58 .. 0.75
   2 !   12.5   0.1   0.00011     0.091       7      76 ..      28      90 ..      22      92 .. 0.90
   3 !    8.4   0.0    0.0021       1.8      10      34 ..      65      89 ..      56     104 .. 0.77
   4 !    8.0   0.0    0.0029       2.5      46      73 ..     221     248 ..     214     253 .. 0.81
   5 !   24.4   0.0   2.1e-08   1.8e-05       5      72 ..     255     327 ..     251     329 .. 0.91
   6 ?    2.5   0.0      0.15   1.3e+02      14      33 ..     370     389 ..     365     394 .. 0.75
   7 !   23.7   0.2   3.6e-08   3.1e-05       7      75 ..     397     458 ..     391     461 .. 0.94

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0016
   PF13424.1 17 rlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAle 67
                + g++deA+++y +a+ l    g +h    + + n + +yl +gd ++A  
  MMETSP1325-20131115|9489_1  4 QAGEFDEAIAHYTEAIGLD---GSNH----VFYSNRSAAYLSKGDAESAMS 47
                5789999999999999774...7666....578888888888888888866 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 0.00011
   PF13424.1  7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76
                 ++n   +++ +gd ++A +   k++++        pd+ + +   + ++++l++ydeA + ++  le++
  MMETSP1325-20131115|9489_1 28 FYSNRSAAYLSKGDAESAMSDGDKCITMK-------PDWPKGYGRKGAALHKLKRYDEAAAVYNAGLEAC 90
                58899999999**************9996.......999999*******************999999876 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0021
   PF13424.1 10 nlalvlrrlgdydeAlelyekalel 34
                + + +l++l++ydeA + y+  le 
  MMETSP1325-20131115|9489_1 65 RKGAALHKLKRYDEAAAVYNAGLEA 89
                5677888888888888888877765 PP

  == domain 4    score: 8.0 bits;  conditional E-value: 0.0029
   PF13424.1  46 aralnnlanlylalgdydeAleylekAl 73 
                  ++l++ +n++++++++++Al+++  + 
  MMETSP1325-20131115|9489_1 221 IKTLREQGNTHYKAKEFEQALQCYDSVF 248
                 5789999999999999999999997655 PP

  == domain 5    score: 24.4 bits;  conditional E-value: 2.1e-08
   PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdt.aralnnlanlylalg....dydeAleylekA 72 
                  ++lnn a v+++++++++A++ +  a+e ++ l++++ ++ a+ +   + +y+ ++    +++ A+ey+ekA
  MMETSP1325-20131115|9489_1 255 VSVLNNKAAVYMEMKEWKQAEKTLADAIEAAQALRPTPFEViAKMYVRWGKVYANKKnpemNLATAIEYYEKA 327
                 579***********************************99989**************444447*********9 PP

  == domain 6    score: 2.5 bits;  conditional E-value: 0.15
   PF13424.1  14 vlrrlgdydeAlelyekale 33 
                   +r +d+  A++ ye+a++
  MMETSP1325-20131115|9489_1 370 DAFRAQDWPTAIKEYEEAIK 389
                 55778888888888888876 PP

  == domain 7    score: 23.7 bits;  conditional E-value: 3.6e-08
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                 + nnla +l++  d++ A + +ekalel       +p +++a    +++   +++y +Ale ++k l+i
  MMETSP1325-20131115|9489_1 397 YNNNLAATLCKIMDFQGAMSACEKALEL-------DPKYVKAIARKGDIEFLRKEYHKALETYQKGLAI 458
                 559***********************99.......699*****************************98 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0019       1.6      12      36 ..       3      27 ..       1      37 [. 0.85
   2 !   15.8   0.0   1.6e-05     0.014       3      42 ..      62     101 ..      60     103 .. 0.87
   3 !    9.3   0.0     0.002       1.7       5      39 ..     225     259 ..     222     263 .. 0.84
   4 !    9.4   0.1    0.0019       1.6       7      31 ..     261     285 ..     255     296 .. 0.86
   5 ?    1.3   0.0      0.74   6.3e+02       4      27 ..     300     327 ..     297     338 .. 0.74
   6 !   16.9   0.1   7.1e-06    0.0061       8      43 ..     368     403 ..     363     405 .. 0.89
   7 ?    5.3   0.0     0.038        33      16      42 ..     410     436 ..     409     438 .. 0.87
   8 ?    2.7   0.0      0.26   2.2e+02       3      41 ..     431     469 ..     429     472 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0019
   PF13428.1 12 lalGdpdeAiallrralalaPddae 36
                l++G++deAia++ +a+ l+ ++  
  MMETSP1325-20131115|9489_1  3 LQAGEFDEAIAHYTEAIGLDGSNHV 27
                799*************999888765 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 1.6e-05
   PF13428.1   3 allalarallalGdpdeAiallrralalaPddaealllLa 42 
                  + + ++al  l ++deA+a++++ l+++P+d ++   La
  MMETSP1325-20131115|9489_1  62 GYGRKGAALHKLKRYDEAAAVYNAGLEACPGDKALTDGLA 101
                 56778999***********************998877766 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.002
   PF13428.1   5 lalarallalGdpdeAiallrralalaPddaeall 39 
                 ++ ++ +  + ++++A+++++ + +++P++  +l 
  MMETSP1325-20131115|9489_1 225 REQGNTHYKAKEFEQALQCYDSVFEQDPEQVSVLN 259
                 566788999*******************9987765 PP

  == domain 4    score: 9.4 bits;  conditional E-value: 0.0019
   PF13428.1   7 larallalGdpdeAiallrralala 31 
                  a++++++ ++++A++ l +a+++a
  MMETSP1325-20131115|9489_1 261 KAAVYMEMKEWKQAEKTLADAIEAA 285
                 589******************9865 PP

  == domain 5    score: 1.3 bits;  conditional E-value: 0.74
   PF13428.1   4 llalarallalGd....pdeAiallrra 27 
                 + +++ ++++  +    ++ Ai+++++a
  MMETSP1325-20131115|9489_1 300 YVRWGKVYANKKNpemnLATAIEYYEKA 327
                 77888889888882222467*****998 PP

  == domain 6    score: 16.9 bits;  conditional E-value: 7.1e-06
   PF13428.1   8 arallalGdpdeAiallrralalaPddaealllLar 43 
                 ++  ++++d+  Ai+ +++a++++P+++++  +La+
  MMETSP1325-20131115|9489_1 368 GNDAFRAQDWPTAIKEYEEAIKRDPKNPAYNNNLAA 403
                 6667899***********************999986 PP

  == domain 7    score: 5.3 bits;  conditional E-value: 0.038
   PF13428.1  16 dpdeAiallrralalaPddaealllLa 42 
                 d+++A+ ++++al+l+P+   a  + +
  MMETSP1325-20131115|9489_1 410 DFQGAMSACEKALELDPKYVKAIARKG 436
                 799***************988877766 PP

  == domain 8    score: 2.7 bits;  conditional E-value: 0.26
   PF13428.1   3 allalarallalGdpdeAiallrralalaPddaealllL 41 
                 a ++ +++ + + ++ +A++ +++ la   d+ +    L
  MMETSP1325-20131115|9489_1 431 AIARKGDIEFLRKEYHKALETYQKGLAIEADNKACKDGL 469
                 55666778888999*************999987765555 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0     0.001      0.87      13      32 ..       4      23 ..       2      26 .. 0.87
   2 !    8.1   0.0    0.0026       2.2       4      32 ..      29      57 ..      27      58 .. 0.89
   3 !   12.0   0.0   0.00015      0.13       3      33 ..      62      93 ..      60      94 .. 0.88
   4 !    7.4   0.0    0.0044       3.7       2      32 ..     222     252 ..     221     255 .. 0.88
   5 ?    6.2   0.2      0.01       8.8       3      31 ..     257     285 ..     255     288 .. 0.90
   6 !   11.6   0.3    0.0002      0.17       2      27 ..     298     327 ..     297     329 .. 0.88
   7 ?    5.3   0.0     0.021        18      16      33 ..     376     394 ..     372     395 .. 0.84
   8 !    8.1   0.1    0.0026       2.2      14      33 ..     408     427 ..     396     428 .. 0.82
   9 !   11.8   0.2   0.00017      0.14       3      32 ..     431     460 ..     429     463 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.001
                HTT-HHHHHHHHH---HHHH CS
   PF13181.1 13 qlGdydkAkeylekalelkp 32
                q G++d+A++++ +a+ l+ 
  MMETSP1325-20131115|9489_1  4 QAGEFDEAIAHYTEAIGLDG 23
                789*************9987 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.0026
                TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1  4 yynlGdiYrqlGdydkAkeylekalelkp 32
                y n++ +Y+++Gd ++A++   k++ +kp
  MMETSP1325-20131115|9489_1 29 YSNRSAAYLSKGDAESAMSDGDKCITMKP 57
                668999*************9999999998 PP

  == domain 3    score: 12.0 bits;  conditional E-value: 0.00015
                -TTT---HHHHTT-HHHHHHHHH---HHHH.. CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekalelkp.r 33
                 y ++G ++ +l++yd+A + ++  le  p +
  MMETSP1325-20131115|9489_1 62 GYGRKGAALHKLKRYDEAAAVYNAGLEACPgD 93
                6889999*****************99988766 PP

  == domain 4    score: 7.4 bits;  conditional E-value: 0.0044
                 --TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelkp 32 
                 k+++++G ++ + +++++A++++  + e +p
  MMETSP1325-20131115|9489_1 222 KTLREQGNTHYKAKEFEQALQCYDSVFEQDP 252
                 67999******************98887666 PP

  == domain 5    score: 6.2 bits;  conditional E-value: 0.01
                 -TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelk 31 
                 +++n++ +Y++++++++A++ l  a+e +
  MMETSP1325-20131115|9489_1 257 VLNNKAAVYMEMKEWKQAEKTLADAIEAA 285
                 689*******************9999976 PP

  == domain 6    score: 11.6 bits;  conditional E-value: 0.0002
                 --TTT---HHHHTT-HHH....HHHHHH-- CS
   PF13181.1   2 kayynlGdiYrqlGdydk....Akeyleka 27 
                 k y + G++Y+++++ +     A+ey+eka
  MMETSP1325-20131115|9489_1 298 KMYVRWGKVYANKKNPEMnlatAIEYYEKA 327
                 5677779*********999999*******9 PP

  == domain 7    score: 5.3 bits;  conditional E-value: 0.021
                 -HHHHHHHHH---HHHH.. CS
   PF13181.1  16 dydkAkeylekalelkp.r 33 
                 d+  A++ +e+a++ +p +
  MMETSP1325-20131115|9489_1 376 DWPTAIKEYEEAIKRDPkN 394
                 56679***********955 PP

  == domain 8    score: 8.1 bits;  conditional E-value: 0.0026
                 TT-HHHHHHHHH---HHHH. CS
   PF13181.1  14 lGdydkAkeylekalelkpr 33 
                  +d+  A+++ ekalel+p+
  MMETSP1325-20131115|9489_1 408 IMDFQGAMSACEKALELDPK 427
                 689999************96 PP

  == domain 9    score: 11.8 bits;  conditional E-value: 0.00017
                 -TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkp 32 
                 a  ++Gdi++  ++y+kA+e ++k l +  
  MMETSP1325-20131115|9489_1 431 AIARKGDIEFLRKEYHKALETYQKGLAIEA 460
                 55799*******************999876 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.1   0.00013      0.11       7      49 ..       2      44 ..       1      51 [. 0.74
   2 !   12.0   0.1   0.00026      0.23      35      64 ..      64      93 ..      57      94 .. 0.88
   3 !   26.5   0.1   7.7e-09   6.6e-06       2      61 ..     226     285 ..     225     291 .. 0.90
   4 !   22.7   0.1   1.1e-07   9.8e-05       2      63 ..     366     427 ..     365     428 .. 0.95
   5 !   11.8   0.2   0.00032      0.27       3      60 ..     401     458 ..     400     464 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00013
   PF13432.1  7 llraGdydeAlaaleaalalaPeaaeallllaeallrlgrlde 49
                +l+aG++deA+a++ +a+ l+  +  ++ ++  a+l +g+ + 
  MMETSP1325-20131115|9489_1  2 ALQAGEFDEAIAHYTEAIGLDGSNHVFYSNRSAAYLSKGDAES 44
                89*******************5555566666666655555444 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00026
   PF13432.1 35 lllaeallrlgrldeAaallraalalaPdd 64
                 + + al++l+r+deAaa+++a l++ P+d
  MMETSP1325-20131115|9489_1 64 GRKGAALHKLKRYDEAAAVYNAGLEACPGD 93
                57899999**************99999976 PP

  == domain 3    score: 26.5 bits;  conditional E-value: 7.7e-09
   PF13432.1   2 alArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalala 61 
                 ++++  ++a+++++Al++++ + +++Pe + +l + a ++++++++++A++ l+ a+++a
  MMETSP1325-20131115|9489_1 226 EQGNTHYKAKEFEQALQCYDSVFEQDPEQVSVLNNKAAVYMEMKEWKQAEKTLADAIEAA 285
                 68999*********************************************7777766544 PP

  == domain 4    score: 22.7 bits;  conditional E-value: 1.1e-07
   PF13432.1   2 alArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPd 63 
                 +++++++ra+d+  A++ +e+a++++P+++ +  +la +l +  ++++A  + ++al+l+P+
  MMETSP1325-20131115|9489_1 366 ERGNDAFRAQDWPTAIKEYEEAIKRDPKNPAYNNNLAATLCKIMDFQGAMSACEKALELDPK 427
                 589*************************************9999999999999999999996 PP

  == domain 5    score: 11.8 bits;  conditional E-value: 0.00032
   PF13432.1   3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalal 60 
                 lA  l +  d++ A  a e+al+l+P+++ a  + +++ + ++++ +A++ +++ la+
  MMETSP1325-20131115|9489_1 401 LAATLCKIMDFQGAMSACEKALELDPKYVKAIARKGDIEFLRKEYHKALETYQKGLAI 458
                 5666667779999************************************999987754 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0    0.0003      0.25       1      32 [.      14      45 ..      14      47 .. 0.94
   2 !    7.4   0.0     0.006       5.2       4      32 ..      51      79 ..      50      81 .. 0.95
   3 ?   -0.2   0.0       1.6   1.4e+03      12      34 .]     220     242 ..     215     242 .. 0.82
   4 !   12.7   0.0   0.00012       0.1       1      34 []     243     276 ..     243     276 .. 0.93
   5 ?   -0.9   0.0       2.6   2.3e+03      16      30 ..     300     314 ..     293     322 .. 0.81
   6 !   19.2   0.1   9.9e-07   0.00085       2      31 ..     384     413 ..     383     415 .. 0.89
   7 !   13.5   0.0   6.6e-05     0.057       1      33 [.     417     449 ..     417     450 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.0003
   PF13431.1  1 lyekaleldPnnadaynnLAelllnnGdleeA 32
                +y +a+ ld  n+++y n+  ++l++Gd e A
  MMETSP1325-20131115|9489_1 14 HYTEAIGLDGSNHVFYSNRSAAYLSKGDAESA 45
                599*************************9977 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.006
   PF13431.1  4 kaleldPnnadaynnLAelllnnGdleeA 32
                k++   P+ +  y +++ +l+++++++eA
  MMETSP1325-20131115|9489_1 51 KCITMKPDWPKGYGRKGAALHKLKRYDEA 79
                99*************************99 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 1.6
   PF13431.1  12 nadaynnLAelllnnGdleeAeq 34 
                 +   +++ ++++++++++e+A+q
  MMETSP1325-20131115|9489_1 220 DIKTLREQGNTHYKAKEFEQALQ 242
                 5667788899**********987 PP

  == domain 4    score: 12.7 bits;  conditional E-value: 0.00012
   PF13431.1   1 lyekaleldPnnadaynnLAelllnnGdleeAeq 34 
                 +y    e+dP+ + ++nn+A ++ + +++++Ae+
  MMETSP1325-20131115|9489_1 243 CYDSVFEQDPEQVSVLNNKAAVYMEMKEWKQAEK 276
                 688889**************************85 PP

  == domain 5    score: -0.9 bits;  conditional E-value: 2.6
   PF13431.1  16 ynnLAelllnnGdle 30 
                 y + +++++n++++e
  MMETSP1325-20131115|9489_1 300 YVRWGKVYANKKNPE 314
                 788999***999887 PP

  == domain 6    score: 19.2 bits;  conditional E-value: 9.9e-07
   PF13431.1   2 yekaleldPnnadaynnLAelllnnGdlee 31 
                 ye+a+++dP+n+   nnLA +l+++ d++ 
  MMETSP1325-20131115|9489_1 384 YEEAIKRDPKNPAYNNNLAATLCKIMDFQG 413
                 9*********************98877665 PP

  == domain 7    score: 13.5 bits;  conditional E-value: 6.6e-05
   PF13431.1   1 lyekaleldPnnadaynnLAelllnnGdleeAe 33 
                 ++ekaleldP+++ a  +++ + + ++++ +A+
  MMETSP1325-20131115|9489_1 417 ACEKALELDPKYVKAIARKGDIEFLRKEYHKAL 449
                 59*********************9999999997 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   2.1e-05     0.018       3      64 ..      34      95 ..      33     105 .. 0.93
   2 !   17.8   0.0   2.3e-06    0.0019       4      58 ..     230     284 ..     228     296 .. 0.90
   3 ?    5.0   0.0     0.023        20      19      64 ..     351     396 ..     348     403 .. 0.89
   4 !    9.4   0.0   0.00096      0.82      10      60 ..     410     460 ..     401     475 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.1e-05
   PF13371.1  3 aiylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapd 64
                a+yl+ +d e+A+   +  + ++Pd p  +   G +l++l ++ +Aa+ ++a le cp + +
  MMETSP1325-20131115|9489_1 34 AAYLSKGDAESAMSDGDKCITMKPDWPKGYGRKGAALHKLKRYDEAAAVYNAGLEACPGDKA 95
                689*******************************************************6654 PP

  == domain 2    score: 17.8 bits;  conditional E-value: 2.3e-06
   PF13371.1   4 iylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflel 58 
                 ++  +++fe+AL++++++ + +P++++ +   + +++++ ++ +A + L  ++e 
  MMETSP1325-20131115|9489_1 230 THYKAKEFEQALQCYDSVFEQDPEQVSVLNNKAAVYMEMKEWKQAEKTLADAIEA 284
                 677899***************************************9999988854 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.023
   PF13371.1  19 erllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapd 64 
                 + l++++P+   e  +rG   ++ +++  A++++e +++++p  p+
  MMETSP1325-20131115|9489_1 351 DKLAYINPELGLEAKERGNDAFRAQDWPTAIKEYEEAIKRDPKNPA 396
                 667889999999999**************************98775 PP

  == domain 4    score: 9.4 bits;  conditional E-value: 0.00096
   PF13371.1  10 dferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcp 60 
                 df+ A+ ++e  l+l+P  +  +   G +++ + +++ A+e ++  l+ + 
  MMETSP1325-20131115|9489_1 410 DFQGAMSACEKALELDPKYVKAIARKGDIEFLRKEYHKALETYQKGLAIEA 460
                 8999*************************************9998776554 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00086      0.74      11      29 ..       4      22 ..       2      45 .. 0.86
   2 ?    3.7   0.1     0.069        59       6      28 ..      67      87 ..      63      99 .. 0.83
   3 !    8.3   0.0    0.0023         2       3      34 ..     225     254 ..     223     256 .. 0.87
   4 ?    5.7   0.0     0.015        13       2      26 ..     258     282 ..     257     294 .. 0.84
   5 ?    2.7   0.0      0.14   1.2e+02      16      27 ..     318     327 ..     316     335 .. 0.83
   6 !    9.2   0.0    0.0012      0.99      10      35 ..     372     395 ..     368     396 .. 0.89
   7 !    9.5   0.0   0.00094      0.81       3      31 ..     399     425 ..     396     427 .. 0.85
   8 ?    5.5   0.1     0.018        15       6      32 ..     436     460 ..     431     464 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00086
   PF13176.1 11 rlgdyekAielyeraLalt 29
                + g++++Ai +y++a++l+
  MMETSP1325-20131115|9489_1  4 QAGEFDEAIAHYTEAIGLD 22
                68************77665 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.069
   PF13176.1  6 arlysrlgdyekAielyeraLal 28
                + +  +l +y++A+ +y +  +l
  MMETSP1325-20131115|9489_1 67 GAALHKLKRYDEAAAVYNA--GL 87
                67889999*********88..65 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0023
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltkdpld 34 
                    ++++ +  ++e+A+++y    ++++dp+ 
  MMETSP1325-20131115|9489_1 225 REQGNTHYKAKEFEQALQCYDS--VFEQDPEQ 254
                 566999****************..99999986 PP

  == domain 4    score: 5.7 bits;  conditional E-value: 0.015
   PF13176.1   2 llnLarlysrlgdyekAielyeraL 26 
                 l+n a +y+++ ++++A++ +  a+
  MMETSP1325-20131115|9489_1 258 LNNKAAVYMEMKEWKQAEKTLADAI 282
                 899***************9998844 PP

  == domain 5    score: 2.7 bits;  conditional E-value: 0.14
   PF13176.1  16 ekAielyeraLa 27 
                  +Aie+ye+  a
  MMETSP1325-20131115|9489_1 318 ATAIEYYEK--A 327
                 58******9..3 PP

  == domain 6    score: 9.2 bits;  conditional E-value: 0.0012
   PF13176.1  10 srlgdyekAielyeraLaltkdplda 35 
                 +r +d+ +Ai+ ye+  a+++dp ++
  MMETSP1325-20131115|9489_1 372 FRAQDWPTAIKEYEE--AIKRDPKNP 395
                 5789***********..*****9875 PP

  == domain 7    score: 9.5 bits;  conditional E-value: 0.00094
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltkd 31 
                 +nLa + ++  d++ A +++e+aL+l  d
  MMETSP1325-20131115|9489_1 399 NNLAATLCKIMDFQGAMSACEKALEL--D 425
                 8*********************6655..4 PP

  == domain 8    score: 5.5 bits;  conditional E-value: 0.018
   PF13176.1   6 arlysrlgdyekAielyeraLaltkdp 32 
                 +++ + + +y kA+e y++  +l+ + 
  MMETSP1325-20131115|9489_1 436 GDIEFLRKEYHKALETYQK--GLAIEA 460
                 777777889**********..777554 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   2.1e-05     0.018       3      82 ..       6      84 ..       4      86 .. 0.84
   2 !   13.6   0.2   5.9e-05      0.05      32      83 ..     228     280 ..     211     281 .. 0.79
   3 ?   -0.4   0.0       1.3   1.1e+03       4      22 ..     316     334 ..     313     355 .. 0.70
   4 !    9.0   0.7    0.0016       1.3       4      83 ..     376     454 ..     373     455 .. 0.81
   5 !    8.7   0.3     0.002       1.7       5      60 ..     411     465 ..     409     472 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.1e-05
                T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHH CS
   PF12895.2  3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLe 82
                +++++A+ ++ +++ ++   ++++++ +   ++++ g+ ++A+   +k   +++  ++    ++ +l+kl++ydeA+av++
  MMETSP1325-20131115|9489_1  6 GEFDEAIAHYTEAIGLDG--SNHVFYSNRSAAYLSKGDAESAMSDGDKcITMKPDWPKGYGRKGAALHKLKRYDEAAAVYN 84
                68999***********98..47999999**************9999887555555544444669***************97 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 5.9e-05
                 HHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2  32 AlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83 
                 ++++y+++e+++A++ ++   e+d++++     +A ++ +++++++A+++L +
  MMETSP1325-20131115|9489_1 228 GNTHYKAKEFEQALQCYDSvFEQDPEQVSVLNNKAAVYMEMKEWKQAEKTLAD 280
                 67899999999999999777777776666666778999999999999999875 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 1.3
                 -HHHHHHHHHHHCCC-ST- CS
   PF12895.2   4 nyknAlflaekllaespkd 22 
                 n  +A+ ++ek+  e +++
  MMETSP1325-20131115|9489_1 316 NLATAIEYYEKAQMEFNTK 334
                 5678888888888776643 PP

  == domain 4    score: 9.0 bits;  conditional E-value: 0.0016
                 -HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2   4 nyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83 
                 ++ +A++ +e++++ +pk  + ay  +lA +l++  +++ A+ +++k leld++ +++   ++   +  ++y++A+++++k
  MMETSP1325-20131115|9489_1 376 DWPTAIKEYEEAIKRDPK--NPAYNNNLAATLCKIMDFQGAMSACEKaLELDPKYVKAIARKGDIEFLRKEYHKALETYQK 454
                 678999999999999995..4666666799999999999999999999999998888777777888877778888888776 PP

  == domain 5    score: 8.7 bits;  conditional E-value: 0.002
                 HHHHHHHHHHHCCC-ST..-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHH CS
   PF12895.2   5 yknAlflaekllaespk..dpedaylyalAlclylngeykrAyellrk.leldssslgc 60 
                 ++ A+  +ek+l+++pk  +    ++ +++   +l +ey++A+e ++k l +++ + +c
  MMETSP1325-20131115|9489_1 411 FQGAMSACEKALELDPKyvK----AIARKGDIEFLRKEYHKALETYQKgLAIEADNKAC 465
                 56789999******996544....55668*****************9996666655444 PP

>> PF04733.9  Coatomer epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       5.4   4.6e+03     214     251 ..      73     110 ..      68     112 .. 0.71
   2 !   14.5   0.1   1.5e-05     0.013     183     231 ..     237     285 ..     230     321 .. 0.90
   3 ?    1.1   0.0      0.19   1.6e+02     190     238 ..     384     432 ..     376     435 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 5.4
                 ---HHHH---HHHHHHH----HHHHHHHHHHHHH---- CS
   PF04733.9 214 lgryeeAeslLkeaLdkdakdeetLiNlvvaaqhlgkd 251
                 l+ry+eA  + +  L+  + d+     l ++ ++ +k+
  MMETSP1325-20131115|9489_1  73 LKRYDEAAAVYNAGLEACPGDKALTDGLATVLKDKDKP 110
                 78999999999999988887776555555665655555 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHHHHHS---HHHH---HHHHHH---HHHH---HHHHHHH- CS
   PF04733.9 183 iqdAyyifqelsekykstplllngkAvvslllgryeeAeslLkeaLdkd 231
                 +++A+  ++ + e+ ++   +ln kA+v + ++++++Ae+ L +a++  
  MMETSP1325-20131115|9489_1 237 FEQALQCYDSVFEQDPEQVSVLNNKAAVYMEMKEWKQAEKTLADAIEAA 285
                 678999999999999999***************************9865 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.19
                 HHHHHHHS---HHHH---HHHHHH---HHHH---HHHHHHH----HHHH CS
   PF04733.9 190 fqelsekykstplllngkAvvslllgryeeAeslLkeaLdkdakdeetL 238
                 ++e   + +++p+  n  A+   ++ +++ A s  ++aL+ d+k+  ++
  MMETSP1325-20131115|9489_1 384 YEEAIKRDPKNPAYNNNLAATLCKIMDFQGAMSACEKALELDPKYVKAI 432
                 777777878999999999999999*******************998775 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.4     2e+03      15      28 ..       5      18 ..       3      21 .. 0.78
   2 ?    3.9   0.2     0.055        47       9      30 ..      67      88 ..      67      90 .. 0.83
   3 ?    1.8   0.0      0.25   2.1e+02       8      28 ..     227     247 ..     222     249 .. 0.82
   4 !    8.8   0.0    0.0016       1.4       4      36 ..     257     289 ..     255     292 .. 0.89
   5 ?    3.4   0.0     0.081        70       6      30 ..     399     423 ..     396     424 .. 0.93
   6 ?   -2.2   0.0       4.7     4e+03      15      31 ..     442     458 ..     439     459 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 2.4
   PF13374.1 15 rgryeeAlaleeea 28
                 g+++eA a++ ea
  MMETSP1325-20131115|9489_1  5 AGEFDEAIAHYTEA 18
                58899999888877 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.055
   PF13374.1  9 AlalrargryeeAlaleeeala 30
                + al++++ry+eA a + + l+
  MMETSP1325-20131115|9489_1 67 GAALHKLKRYDEAAAVYNAGLE 88
                6799*********998877665 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.25
   PF13374.1   8 LAlalrargryeeAlaleeea 28 
                  ++++++ +++e+Al+ +  +
  MMETSP1325-20131115|9489_1 227 QGNTHYKAKEFEQALQCYDSV 247
                 599************988766 PP

  == domain 4    score: 8.8 bits;  conditional E-value: 0.0016
   PF13374.1   4 alnnLAlalrargryeeAlaleeealairrrll 36 
                  lnn A ++++++++ +A++ + +a +  ++l 
  MMETSP1325-20131115|9489_1 257 VLNNKAAVYMEMKEWKQAEKTLADAIEAAQALR 289
                 69*****************99999999988885 PP

  == domain 5    score: 3.4 bits;  conditional E-value: 0.081
   PF13374.1   6 nnLAlalrargryeeAlaleeeala 30 
                 nnLA +l++  +++ A    e+al+
  MMETSP1325-20131115|9489_1 399 NNLAATLCKIMDFQGAMSACEKALE 423
                 9***************999999997 PP

  == domain 6    score: -2.2 bits;  conditional E-value: 4.7
   PF13374.1  15 rgryeeAlaleeealai 31 
                 r++y +Al+ +++ lai
  MMETSP1325-20131115|9489_1 442 RKEYHKALETYQKGLAI 458
                 78899999988888876 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.63   5.3e+02      12      27 ..       4      19 ..       2      20 .. 0.82
   2 ?    1.0   0.2      0.79   6.7e+02       7      24 ..      67      84 ..      65      85 .. 0.83
   3 !    8.0   0.0    0.0046       3.9       6      31 ..     227     252 ..     223     253 .. 0.89
   4 ?    2.7   0.2      0.23   1.9e+02       7      28 ..     262     283 ..     260     285 .. 0.84
   5 ?   -0.1   0.0       1.7   1.5e+03      15      25 ..     316     326 ..     300     328 .. 0.72
   6 !    9.0   0.0    0.0021       1.8      10      32 ..     372     393 ..     367     394 .. 0.86
   7 ?   -2.0   0.0         7     6e+03      12      32 ..     407     427 ..     400     427 .. 0.75
   8 ?    0.9   0.1      0.86   7.3e+02       7      25 ..     436     454 ..     430     454 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.63
                HHHHHHHHHHHHHHHH CS
   PF13174.1 12 klgdtdeAlealerli 27
                ++g++deA++ + + i
  MMETSP1325-20131115|9489_1  4 QAGEFDEAIAHYTEAI 19
                567*********9876 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.79
                HHHHHHHHHHHHHHHHHH CS
   PF13174.1  7 alsyyklgdtdeAleale 24
                + ++ kl+++deA ++++
  MMETSP1325-20131115|9489_1 67 GAALHKLKRYDEAAAVYN 84
                56788889*******997 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.0046
                 HHHHHHHHHHHHHHHHHHHHHHHH-T CS
   PF13174.1   6 lalsyyklgdtdeAlealerlikeyP 31 
                 ++  +yk++++++Al+ ++ + ++ P
  MMETSP1325-20131115|9489_1 227 QGNTHYKAKEFEQALQCYDSVFEQDP 252
                 78899**99************99998 PP

  == domain 4    score: 2.7 bits;  conditional E-value: 0.23
                 HHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1   7 alsyyklgdtdeAlealerlik 28 
                 a +y +++++ +A ++l + i+
  MMETSP1325-20131115|9489_1 262 AAVYMEMKEWKQAEKTLADAIE 283
                 55688889*********99987 PP

  == domain 5    score: -0.1 bits;  conditional E-value: 1.7
                 HHHHHHHHHHH CS
   PF13174.1  15 dtdeAlealer 25 
                 + + A+e++e+
  MMETSP1325-20131115|9489_1 316 NLATAIEYYEK 326
                 5569*****98 PP

  == domain 6    score: 9.0 bits;  conditional E-value: 0.0021
                 HHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  10 yyklgdtdeAlealerlikeyPd 32 
                 ++++ d+  A++ +e+ ik+ P+
  MMETSP1325-20131115|9489_1 372 FRAQ-DWPTAIKEYEEAIKRDPK 393
                 4557.*****************8 PP

  == domain 7    score: -2.0 bits;  conditional E-value: 7
                 H.HHHHHHHHHHHHHHHHH-TT CS
   PF13174.1  12 k.lgdtdeAlealerlikeyPd 32 
                 k + d++ A+ a e+ ++  P+
  MMETSP1325-20131115|9489_1 407 KiM-DFQGAMSACEKALELDPK 427
                 557.889999999999998875 PP

  == domain 8    score: 0.9 bits;  conditional E-value: 0.86
                 HHHHHHHHHHHHHHHHHHH CS
   PF13174.1   7 alsyyklgdtdeAlealer 25 
                 + + +  +++ +Ale++++
  MMETSP1325-20131115|9489_1 436 GDIEFLRKEYHKALETYQK 454
                 6667776799*******97 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1    0.0045       3.8      17      33 ..       4      20 ..       4      21 .. 0.91
   2 ?   -0.7   0.3       1.4   1.2e+03      17      33 ..      72      88 ..      63      91 .. 0.77
   3 ?    2.8   0.1      0.12        98      18      30 ..     234     246 ..     226     270 .. 0.89
   4 ?    4.2   0.0     0.041        35      20      36 ..     316     332 ..     297     354 .. 0.86
   5 ?    0.0   0.0      0.84   7.2e+02      31      53 ..     380     403 ..     369     410 .. 0.72
   6 ?    4.1   0.1     0.045        39      19      33 ..     443     457 ..     414     475 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0045
                HTT-HHHHHHHHHHHHH CS
  PF04212.13 17 eagkyeeAlelYkeAle 33
                +ag+++eA+ +Y+eA++
  MMETSP1325-20131115|9489_1  4 QAGEFDEAIAHYTEAIG 20
                589************98 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1.4
                HTT-HHHHHHHHHHHHH CS
  PF04212.13 17 eagkyeeAlelYkeAle 33
                + ++y+eA   Y  +le
  MMETSP1325-20131115|9489_1 72 KLKRYDEAAAVYNAGLE 88
                56799999999999998 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.12
                 TT-HHHHHHHHHH CS
  PF04212.13  18 agkyeeAlelYke 30 
                 a+++e+Al++Y +
  MMETSP1325-20131115|9489_1 234 AKEFEQALQCYDS 246
                 7899999999975 PP

  == domain 4    score: 4.2 bits;  conditional E-value: 0.041
                 -HHHHHHHHHHHHHHHH CS
  PF04212.13  20 kyeeAlelYkeAlelLl 36 
                 +++ A+e+Y++A+ +++
  MMETSP1325-20131115|9489_1 316 NLATAIEYYEKAQMEFN 332
                 8999********98875 PP

  == domain 5    score: 0.0 bits;  conditional E-value: 0.84
                 HHHHHHHHHHHC.TTHHCHHHHHH CS
  PF04212.13  31 AlelLlqalkye.pnperrealrq 53 
                 A++++++a+k + +np+  + l +
  MMETSP1325-20131115|9489_1 380 AIKEYEEAIKRDpKNPAYNNNLAA 403
                 777888888888667777666655 PP

  == domain 6    score: 4.1 bits;  conditional E-value: 0.045
                 T-HHHHHHHHHHHHH CS
  PF04212.13  19 gkyeeAlelYkeAle 33 
                 ++y +Ale Y+++l 
  MMETSP1325-20131115|9489_1 443 KEYHKALETYQKGLA 457
                 477788888888764 PP

>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       2.7   2.3e+03      82     108 ..     233     260 ..     224     280 .. 0.48
   2 ?   -3.2   0.0       5.8     5e+03      73      84 ..     317     328 ..     309     351 .. 0.58
   3 ?   11.6   0.3   0.00016      0.14      31     116 ..     385     469 ..     370     480 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 2.7
                 T-SSHHHHHHHH--.--THHHHSS-SST CS
  PF00637.15  82 kadlyeeavilykk.inefkkaisllkk 108
                 ka+ +e+a+ +y+  ++++ + +s+l++
  MMETSP1325-20131115|9489_1 233 KAKEFEQALQCYDSvFEQDPEQVSVLNN 260
                 3444444444444333333333333332 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 5.8
                 TTHHHHHHHT-S CS
  PF00637.15  73 lekvaklcekad 84 
                 l++++++ eka+
  MMETSP1325-20131115|9489_1 317 LATAIEYYEKAQ 328
                 333333333332 PP

  == domain 3    score: 11.6 bits;  conditional E-value: 0.00016
                 TS--...-S--HHHHHHHHHHHHHTT--HHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGG CS
  PF00637.15  31 ekvlketsrenpavqtallelyakyedpekleeflkknnnydlekvaklcekadlyeeavilykkinefkkaisllkklkdfddai 116
                 e+++k++++ npa+++ l+ +++k  d++ +++ ++k    d++ v  ++ k d   ++++ +k+++ ++k + +  ++k+ +d +
  MMETSP1325-20131115|9489_1 385 EEAIKRDPK-NPAYNNNLAATLCKIMDFQGAMSACEKALELDPKYVKAIARKGDIEFLRKEYHKALETYQKGLAIEADNKACKDGL 469
                 555656655.5*******************************************99999999999999999999866666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       758  (0.0554418); expected 273.4 (0.02)
Passed bias filter:                      424  (0.0310123); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 1.19u 0.36s 00:00:01.54 Elapsed: 00:00:00.84
# Mc/sec: 1871.44
//
Query:       MMETSP1325-20131115|9500_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-12   45.3   0.8    9.4e-12   44.7   0.5    1.2  1  PF07802.6 GCK domain
  ------ inclusion threshold ------
      0.083   12.5   0.0       0.14   11.8   0.0    1.3  1  PF08583.5 Cytochrome c oxidase biogenesis protein Cmc1 like
       0.14   11.8   0.0       0.19   11.4   0.0    1.2  1  PF08897.6 Domain of unknown function (DUF1841)


Domain annotation for each model (and alignments):
>> PF07802.6  GCK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.5   2.1e-15   9.4e-12       2      69 ..      37     103 ..      36     109 .. 0.89

  Alignments for each domain:
  == domain 1    score: 44.7 bits;  conditional E-value: 2.1e-15
   PF07802.6   2 ecklckflkgGeCKeaFvaleeCveeaekekekdkvtkckevraklkkCmdehsdYYePlLavekaae 69 
                  c +ckf+  G C   + ++++Cv+ a++  + d vt c++  + l  C+ +h++YY+ l ++e++ +
  MMETSP1325-20131115|9500_1  37 SCPFCKFMLAGPCGTLYEDWDDCVNPAKAAGR-DFVTICQPFSLALFACISQHPEYYDELKKAENQPK 103
                 59**********************88888777.************************99887776655 PP

>> PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.1e-05      0.14      13      65 ..      49     101 ..      44     106 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.1e-05
   PF08583.5  13 CaelikafaeChkd...rtlkavgkCneekeamkkClkeyrtderlkdrekdeiik 65 
                 C  l++++++C +     +  +v  C+    a+ +C+ ++   e+  d+ k+ + +
  MMETSP1325-20131115|9500_1  49 CGTLYEDWDDCVNPakaAGRDFVTICQPFSLALFACISQH--PEYY-DELKKAENQ 101
                 99999******8755458999*****************99..6666.555554444 PP

>> PF08897.6  Domain of unknown function (DUF1841)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.1e-05      0.19      30      53 ..      81     104 ..      71     112 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.1e-05
   PF08897.6  30 aaevieeHPEYhalledaeealek 53 
                 +  +i++HPEY + l++ae++ +k
  MMETSP1325-20131115|9500_1  81 LFACISQHPEYYDELKKAENQPKK 104
                 56789***********99987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 562.41
//
Query:       MMETSP1325-20131115|9502_1  [L=430]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.55
# Mc/sec: 1873.52
//
Query:       MMETSP1325-20131115|9505_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.047   12.8   0.6      0.071   12.2   0.4    1.2  1  PF04176.8 TIP41-like family


Domain annotation for each model (and alignments):
>> PF04176.8  TIP41-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.4   5.2e-06     0.071     147     173 ..      34      60 ..      30      62 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.2e-06
   PF04176.8 147 nVlvrvrdtRiyvefeeelvlreyker 173
                 +V vr+ dtR+++  ++  vlre+ ++
  MMETSP1325-20131115|9505_1  34 EVRVRLFDTRVHHTHQHIRVLREIDHQ 60 
                 699********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 573.04
//
Query:       MMETSP1325-20131115|9507_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-07   30.3   0.0    2.9e-07   30.0   0.0    1.1  1  PF02518.21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase


Domain annotation for each model (and alignments):
>> PF02518.21  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   2.1e-11   2.9e-07      26     109 ..      20     124 ..       5     126 .. 0.83

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 2.1e-11
                 EEEEEEEEEC.......TCEEEEEEE-----TH..............HHHHHHCSTTTCCSCSSGGGTT----THHHHHHCCEEEEEEEEECTCT-CEEEEEEEE CS
  PF02518.21  26 eievrvkree.......gelvieVeDnGiGipe..............edlervfepffqtdddsrkvggtGlGlsivkklvellggeieveskeggGttvtlrlp 109
                  +ev ++r++        +++i+V+D+  G+++              +++ + ++  +++++ + +++g G+Gl+++ +++++   ++ev+s  g+Gt  tl+++
  MMETSP1325-20131115|9507_1  20 PVEVVLERAQpqepgglTDVSITVTDHAGGMDQgtlngalsalaqgrKKVWDRLDDAVSYQPARHPLHGIGIGLPMSMLYANYGSCDLEVKSTLGKGTVATLWIR 124
                 5666666666777888889**************88888888888777555555777777777*************************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 734.54
//
Query:       MMETSP1325-20131115|9506_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.9   0.3       0.14   11.5   0.2    1.1  1  PF02478.11 Pneumovirus phosphoprotein


Domain annotation for each model (and alignments):
>> PF02478.11  Pneumovirus phosphoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2     1e-05      0.14     225     274 ..      63     113 ..      52     118 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1e-05
  PF02478.11 225 aeklkeEesqrakiddgs.vkLtekakeLnkivedesssgeseeeeededl 274
                 +e ++e +++ a+   g   +L  kak+L  ++ +  ++ge eeeeed ++
  MMETSP1325-20131115|9506_1  63 VEFFRENQEDIAALVGGKpASLGTKAKKLLALLGEGGEEGEYEEEEEDGEE 113
                 57778888888888888889********************99999986554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 943.25
//
Query:       MMETSP1325-20131115|9508_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-35  121.6   0.0    3.1e-35  121.5   0.0    1.0  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain
  ------ inclusion threshold ------
      0.025   13.8   0.0      0.031   13.5   0.0    1.0  1  PF10307.4  Hypothetical protein (DUF2410)
       0.11   12.3   0.0       0.21   11.4   0.0    1.4  1  PF01325.14 Iron dependent repressor, N-terminal DNA binding domain


Domain annotation for each model (and alignments):
>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.5   0.0   6.8e-39   3.1e-35      38     150 ..       2     115 ..       1     116 [] 0.98

  Alignments for each domain:
  == domain 1    score: 121.5 bits;  conditional E-value: 6.8e-39
                 xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00006.20  38 nsnsdai.iyvgiGergnevaevleefrkepimkrttlvantsnepvaareasiytgitlAeyfrdqgknVlliaDslsrwaealreisgrlgempadqgypaylgaklaslye 150
                 ++++d+i +yv+iG++++ va++++++++++++++t++va+++n+p+  +++++ytg ++Aeyf+++gk  l+i+D+ls++a+a+r++s++l+++p++++yp+++++ +++l+e
  MMETSP1325-20131115|9508_1   2 QAKEDVIcVYVAIGQKASSVAQIVTTLEEKGALDYTVIVAANANDPATLQYIAPYTGAAIAEYFMYKGKATLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 115
                 56889999********************************************************************************************************98 PP

>> PF10307.4  Hypothetical protein (DUF2410)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.8e-06     0.031      69     153 ..       4      88 ..       2     100 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.8e-06
   PF10307.4  69 dkdalsv.lLTGRkeskFselieklveskklefdavcLkkepaeeefesTlefKqalledlletYkeleeiriYeDRikhvkkFre 153
                 ++d ++v +  G k s+ +++++ l e+ +l++ +++  ++ + ++ ++ + +  a + +   +Yk    + iY+D  k+ +++r+
  MMETSP1325-20131115|9508_1   4 KEDVICVyVAIGQKASSVAQIVTTLEEKGALDYTVIVAANANDPATLQYIAPYTGAAIAEY-FMYKGKATLIIYDDLSKQAQAYRQ 88 
                 567888834469************************9999866677777777777777775.47999999*************997 PP

>> PF01325.14  Iron dependent repressor, N-terminal DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.7e-05      0.21      32      54 ..      14      36 ..      12      38 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.7e-05
                CTS-HHHHHHHHHHHHHTTSEEE CS
  PF01325.14 32 LnvspstVsemlkkLekdGyvey 54
                +++++s+V + +  Le++G ++y
  MMETSP1325-20131115|9508_1 14 IGQKASSVAQIVTTLEEKGALDY 36
                89*****************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 555.95
//
Query:       MMETSP1325-20131115|9509_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   13.0   0.9       0.16   12.0   0.6    1.6  1  PF06900.6 Protein of unknown function (DUF1270)


Domain annotation for each model (and alignments):
>> PF06900.6  Protein of unknown function (DUF1270)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.6   1.2e-05      0.16       2      25 ..      20      43 ..      19      53 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.2e-05
   PF06900.6  2 sniyksylvavlCftvlaivlmPf 25
                s++y sy + +lC    a++++P+
  MMETSP1325-20131115|9509_1 20 SDVYNSYPILILCTVFTAVIFVPY 43
                89***********99999*99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|9510_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-14   53.0   8.4    3.4e-14   52.1   5.8    1.4  1  PF13639.1  Ring finger domain
    1.3e-09   37.9   5.9    2.6e-09   36.9   4.1    1.5  1  PF12678.2  RING-H2 zinc finger
    4.1e-09   35.9   7.4    6.8e-09   35.3   5.1    1.3  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    1.3e-05   24.8   6.0    2.3e-05   24.0   4.2    1.4  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
    4.3e-05   22.9   8.4    0.00014   21.2   5.9    1.9  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    0.00043   19.7   9.9    0.00084   18.8   6.8    1.5  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
     0.0021   17.6  11.6      0.007   15.9   7.0    2.1  2  PF14446.1  Prokaryotic RING finger family 1
  ------ inclusion threshold ------
       0.01   15.5   0.3      0.016   14.8   0.2    1.4  1  PF05883.6  Baculovirus U-box/Ring-like domain
      0.055   12.8   2.7          8    5.9   4.2    2.2  2  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
       0.16   11.8   5.1       0.39   10.6   3.6    1.7  1  PF13832.1  PHD-zinc-finger like domain
       0.27   11.1   8.3        1.3    8.9   5.8    2.0  1  PF11793.3  FANCL C-terminal domain
       0.28   11.2   6.7        0.6   10.1   4.2    1.9  2  PF13771.1  PHD-like zinc-binding domain
       0.37   10.2   6.2        0.5    9.8   3.2    2.0  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
       0.44   10.1   8.5        0.3   10.7   4.6    1.8  1  PF00628.24 PHD-finger
        7.9    6.4  11.6         14    5.6   6.8    2.3  3  PF08746.6  RING-like domain


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   5.8   3.8e-17   3.4e-14       2      45 ..     123     167 ..     122     168 .. 0.98

  Alignments for each domain:
  == domain 1    score: 52.1 bits;  conditional E-value: 3.8e-17
   PF13639.1   2 eCaiCldelsegeevvrlp.CgHvfHeeCldewlrssnsCPlCrk 45 
                 eC++C d++ ege++v+lp C+H fH  C+ +wl ++++CP+Cr+
  MMETSP1325-20131115|9510_1 123 ECPVCADDILEGEDIVCLPaCKHHFHLPCILQWLGQQSNCPMCRT 167
                 8*******************************************8 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   4.1   2.9e-12   2.6e-09      22      75 .]     124     166 ..     102     166 .. 0.72

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 2.9e-12
   PF12678.2  22 CaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrktCPlcr 75 
                 C +C  ++         +g  ++  v + +C+H+FHl Ci +Wl ++++CP+cr
  MMETSP1325-20131115|9510_1 124 CPVCADDI--------LEG--ED-IVCLPACKHHFHLPCILQWLGQQSNCPMCR 166
                 33333333........333..33.444567***********************8 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   5.1   7.4e-12   6.8e-09       3      46 .]     122     167 ..     120     167 .. 0.87

  Alignments for each domain:
  == domain 1    score: 35.3 bits;  conditional E-value: 7.4e-12
   PF13923.1   3 fsCpiCleel...enpviltpCgHlyCkkCieqwlekskkkCPiCrn 46 
                  +Cp+C ++    e+ v l  C H+++ +Ci qwl + +++CP+Cr+
  MMETSP1325-20131115|9510_1 122 IECPVCADDIlegEDIVCLPACKHHFHLPCILQWLGQ-QSNCPMCRT 167
                 68******9965455777777****************.*******96 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   4.2   2.6e-08   2.3e-05      35      80 ..     124     168 ..     112     172 .. 0.77

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 2.6e-08
   PF12861.2  35 cpsck...fpGddcplvlGkckhnfhlhcilkwletetskglcpmcrqt 80 
                 cp c    + G+d  + l  ckh fhl cil+wl ++   ++cpmcr +
  MMETSP1325-20131115|9510_1 124 CPVCAddiLEGEDI-VCLPACKHHFHLPCILQWLGQQ---SNCPMCRTA 168
                 56664221345553.56789**************885...58*****76 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   5.9   1.6e-07   0.00014       1      41 []     124     165 ..     124     165 .. 0.89

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.6e-07
                 -TTTSSS-SSEE....BSCTS-EE-CHHHHHHHCST-----TTT CS
  PF00097.20   1 CpiCleeakepn...elleCkHsfCskCirkilksrkkvkCPlC 41 
                 Cp+C + + e      l  CkH f+ +Ci+++l   ++ +CP+C
  MMETSP1325-20131115|9510_1 124 CPVCADDILEGEdivCLPACKHHFHLPCILQWLG--QQSNCPMC 165
                 9999998877666668899***************..8899**** PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   6.8   9.2e-07   0.00084       4      47 ..     123     169 ..     116     171 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 9.2e-07
   PF13920.1   4 tCvvCle...readvlllp.CgHlclCeeCaerllkrkkkCpiCrspi 47 
                 +C+vC +   + +d+++lp C+H  +   C  ++l ++ +Cp+Cr+ +
  MMETSP1325-20131115|9510_1 123 ECPVCADdilEGEDIVCLPaCKHH-FHLPCILQWLGQQSNCPMCRTAV 169
                 7******5554678888877****.********************987 PP

>> PF14446.1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   7.0   7.7e-06     0.007       3      41 ..     119     158 ..     117     172 .. 0.77
   2 ?    0.5   1.3      0.48   4.3e+02      24      32 ..     162     170 ..     157     182 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 7.7e-06
   PF14446.1   3 dtktrCavCgkklkdkddivvCpeCgapyHreCw.eeage 41 
                  + + C+vC + + +++div  p+C+  +H  C  +  g+
  MMETSP1325-20131115|9510_1 119 HETIECPVCADDILEGEDIVCLPACKHHFHLPCIlQWLGQ 158
                 57899****************************7444444 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.48
   PF14446.1  24 CpeCgapyH 32 
                 Cp+C + ++
  MMETSP1325-20131115|9510_1 162 CPMCRTAVC 170
                 888888777 PP

>> PF05883.6  Baculovirus U-box/Ring-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.2   1.8e-05     0.016      18      78 ..     113     168 ..      98     224 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.8e-05
   PF05883.6  18 fkelfkevsveCaiCldeieenkGvvavtekgtldleklfhkeClkrfkrekkrDPfkRei 78 
                  +e++++ ++eC +C d+i e + +v ++  +     + fh  C+ ++  ++++ P  R+ 
  MMETSP1325-20131115|9510_1 113 KMEEHEHETIECPVCADDILEGEDIVCLPACK-----HHFHLPCILQWLGQQSNCPMCRTA 168
                 456677789************99999999865.....89*********9999999988864 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0       0.1        93      45      56 ..     118     127 ..      79     128 .. 0.76
   2 ?    5.9   4.2    0.0088         8      25      56 ..     138     165 ..     110     166 .. 0.69

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.1
                 TT--B------- CS
   PF11789.3  45 rkkkvkCPvaGC 56 
                 ++++++CPv  C
  MMETSP1325-20131115|9510_1 118 EHETIECPV--C 127
                 67899****..7 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0088
                 EEES----EEEHHHHHHHHTTT--B------- CS
   PF11789.3  25 vtskkCnHvFEkeaIlkmlkrkkkvkCPvaGC 56 
                 v   +C+H+F    Il+ l   ++ +CP+  C
  MMETSP1325-20131115|9510_1 138 VCLPACKHHFHLPCILQWL--GQQSNCPM--C 165
                 44449**************..88899**9..7 PP

>> PF13832.1  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.6   0.00043      0.39      45      87 ..     113     154 ..      88     173 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00043
   PF13832.1  45 dvekivkerlklkcvlCkkk..kGaciqCskgeCktafHvtCalk 87 
                 ++e+   e+ + +c +C +   +G  i C    Ck+ fH  C+l+
  MMETSP1325-20131115|9510_1 113 KMEEH--EHETIECPVCADDilEGEDIVCLP-ACKHHFHLPCILQ 154
                 33333..345689*****9999********9.9*********976 PP

>> PF11793.3  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   5.8    0.0014       1.3       2      45 ..     121     160 ..     120     172 .. 0.86

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0014
                 --S-SSS--SS--------B--S-TT----B-SGGGHHHHHHHH CS
   PF11793.3   2 eveCgiCyayrldsgevpdisCdnekCnkkfHaaCLkeWlrslk 45 
                 ++eC++C    l   e  di+C  + C+++fH  C+ +Wl +++
  MMETSP1325-20131115|9510_1 121 TIECPVCADDIL---EGEDIVCL-PACKHHFHLPCILQWLGQQS 160
                 689****99999...55689995.89**************8765 PP

>> PF13771.1  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.2   0.00066       0.6      21      71 ..     106     157 ..      88     174 .. 0.76
   2 ?   -1.0   0.2       1.9   1.7e+03      35      48 ..     158     171 ..     153     183 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00066
   PF13771.1  21 mepvesvekiakerrklkCslCkkk..kGaciqCskkkCkrafHvtCakeagl 71 
                   + e+ + +++e ++ +C +C     +G  i C    Ck++fH+ C  +   
  MMETSP1325-20131115|9510_1 106 ASAGEEAKMEEHEHETIECPVCADDilEGEDIVCLP-ACKHHFHLPCILQWLG 157
                 455677788999999********88888******86.9*********987554 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 1.9
   PF13771.1  35 rklkCslCkkkkGa 48 
                 ++ +C +C++ + a
  MMETSP1325-20131115|9510_1 158 QQSNCPMCRTAVCA 171
                 57788888887544 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.2   0.00055       0.5       5      57 ..     116     163 ..     111     166 .. 0.83
   2 ?   -2.5   0.0         4   3.6e+03      21      28 ..     186     193 ..     179     203 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00055
                 XXXXXX-B-TTT-S.-SS....EEEES.---EEEHHHHHHHHHHHHTTT--B--- CS
   PF13445.1   5 ahfhsifaCpiske.qsteqnpPvvLp.CGhvisrealeklakggrsnkgrfkCP 57 
                  h h+ + Cp++ +    e ++ v Lp C h +   ++ +++ +      +  CP
  MMETSP1325-20131115|9510_1 116 EHEHETIECPVCADdI-LEGEDIVCLPaCKHHFHLPCILQWLGQ------QSNCP 163
                 489***********77.557777******************972......44555 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 4
                 S....EEE CS
   PF13445.1  21 teqnpPvv 28 
                   +n+Pv+
  MMETSP1325-20131115|9510_1 186 RAKNEPVR 193
                 45677876 PP

>> PF00628.24  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.6   0.00033       0.3       2      49 ..     124     166 ..     123     168 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00033
                 BTTTTCTCTTS-EEEBS.SSSSEEETTTSSS-SSHHSHHSTTB-SCCCH CS
  PF00628.24   2 CkiCgesdeegelvlCd.gCkewfHlkClglkleseekpegewlCeeCk 49 
                 C +C ++  ege ++C   Ck++fHl C+   l ++++      C+ C+
  MMETSP1325-20131115|9510_1 124 CPVCADDILEGEDIVCLpACKHHFHLPCILQWLGQQSN------CPMCR 166
                 ******8889999999659*********9766553332......66665 PP

>> PF08746.6  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2       1.5   1.4e+03      34      43 .]     119     127 ..     115     127 .. 0.65
   2 ?    5.6   6.8     0.016        14       1      43 []     124     165 ..     124     170 .. 0.78
   3 ?   -0.4   0.8       1.2   1.1e+03      14      34 ..     165     187 ..     162     192 .. 0.65

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 1.5
   PF08746.6  34 hrskkrCpsC 43 
                 h++   Cp C
  MMETSP1325-20131115|9510_1 119 HETI-ECPVC 127
                 4444.59999 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.016
   PF08746.6   1 CeqCkeiviqg..vrCgnedCeiklHvdClkkyirhrskkrCpsC 43 
                 C +C + +++g  + C    C+ ++H++C+ + + ++s + Cp C
  MMETSP1325-20131115|9510_1 124 CPVCADDILEGedIVCL-PACKHHFHLPCILQWLGQQS-N-CPMC 165
                 56666655544337898.79**********99999888.5.9999 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 1.2
   PF08746.6  14 CgnedCeik..lHvdClkkyirh 34 
                 C +  C+ +   H++C ++  r 
  MMETSP1325-20131115|9510_1 165 CRTAVCAPHpdDHDPCEDTIERA 187
                 66666666666799998876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       859  (0.0628291); expected 273.4 (0.02)
Passed bias filter:                      509  (0.0372294); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.59
# Mc/sec: 970.73
//
Query:       MMETSP1325-20131115|9512_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.062   12.0   0.1      0.076   11.7   0.0    1.1  1  PF06728.8 GPI transamidase subunit PIG-U


Domain annotation for each model (and alignments):
>> PF06728.8  GPI transamidase subunit PIG-U
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.6e-06     0.076     208     275 ..      25      93 ..       4      96 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5.6e-06
   PF06728.8 208 ssklsklls..ilvlfllyllalllaSfl.lggsws..fleatygniltvsdltPnlGlfWYfFtemFdhFrs 275
                  s++++l+    +++f+++   ++ aS    + s+   f+ ++++++++++   P     W++F  mFd F++
  MMETSP1325-20131115|9512_1  25 ASAWRRLMAwtPFLAFSST---FCAASPTpSRTSEAspFMPEVIPDVMLLTLFAPDS-AAWFIFRRMFDAFKD 93 
                 4455555541123333333...3446666444455468************9999*97.779**********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       531  (0.0388385); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.64
# Mc/sec: 396.90
//
Query:       MMETSP1325-20131115|9514_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-08   34.1   0.2    1.4e-08   34.1   0.2    1.0  1  PF01026.16 TatD related DNase


Domain annotation for each model (and alignments):
>> PF01026.16  TatD related DNase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.2     1e-12   1.4e-08      79     148 ..      10      86 ..       1      88 [] 0.84

  Alignments for each domain:
  == domain 1    score: 34.1 bits;  conditional E-value: 1e-12
                 HH.HHH--SSEEEE-EE-EE-.......------HHHHHHHHHHHHHHHHHTT--EEEEEES-HHHHHHHHHHH--T CS
  PF01026.16  79 el.anvkhskvvaiGEiGLDy......ysreestkeaqeevFeeqlelAkelklplviHtreaeedlleilkeaaea 148
                 +l + ++  + + +GE GL +       + + + + +q ev e+++ +A+ l++++++H+++a++ ll++lk  +e+
  MMETSP1325-20131115|9514_1  10 RLvERLEAHPGAMVGEAGLCKcakslrGPLKAKHWAKQLEVCERHIAIAAALGRVISLHCVKAHAPLLDMLKTMHER 86 
                 4555567778889******9977766657788899************************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 390.52
//
Query:       MMETSP1325-20131115|9515_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.086   12.7   0.9        3.3    7.7   0.0    2.6  3  PF01436.16 NHL repeat


Domain annotation for each model (and alignments):
>> PF01436.16  NHL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0    0.0053        73      14      25 ..       3      15 ..       1      18 [. 0.84
   2 ?    7.7   0.0   0.00024       3.3       7      22 ..      18      35 ..      15      37 .. 0.82
   3 ?   -1.3   0.0      0.17   2.4e+03       3       8 ..      47      52 ..      46      54 .. 0.78

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.0053
                -EEEEE.GCCTEE CS
  PF01436.16 14 dvyVaD.senhrv 25
                +v+++D ++n+ +
  MMETSP1325-20131115|9515_1  3 QVLIGDaHYNNAI 15
                79****9999987 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.00024
                EEE-.TT--EEEEE.GCC CS
  PF01436.16  7 vavd.sdGdvyVaD.sen 22
                ++v  ++ +++V+D ++n
  MMETSP1325-20131115|9515_1 18 LCVAnKGQELLVGDnCGN 35
                89999*********4444 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.17
                SBEEEE CS
  PF01436.16  3 nPhGva 8 
                +P++v+
  MMETSP1325-20131115|9515_1 47 QPSDVV 52
                899996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|9517_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 273.27
//
Query:       MMETSP1325-20131115|9518_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 219.24
//
Query:       MMETSP1325-20131115|9516_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|9513_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-12   46.4   0.4    5.9e-12   44.9   0.3    1.9  2  PF02209.14 Villin headpiece domain
    2.6e-11   42.4   6.0    3.5e-05   23.2   0.0    5.7  6  PF07719.12 Tetratricopeptide repeat
    1.2e-10   40.7   6.3     0.0016   17.9   0.3    3.5  3  PF13414.1  TPR repeat
    1.6e-09   38.0  12.7    8.3e-06   26.2   0.1    4.8  5  PF13432.1  Tetratricopeptide repeat
    1.8e-08   34.2   0.6     0.0053   17.0   0.0    4.5  5  PF13174.1  Tetratricopeptide repeat
    5.8e-08   31.9   2.3    0.00013   21.3   0.0    4.1  5  PF00515.23 Tetratricopeptide repeat
    5.2e-06   26.5  11.0     0.0084   16.5   0.2    4.1  4  PF13428.1  Tetratricopeptide repeat
    6.2e-06   25.9   1.2     0.0032   17.2   0.1    3.1  5  PF13424.1  Tetratricopeptide repeat
    0.00017   21.4   0.5       0.25   11.5   0.0    3.9  4  PF13431.1  Tetratricopeptide repeat
    0.00034   20.5   0.4        0.1   12.6   0.0    2.3  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    0.00034   20.0   1.6       0.79    9.5   0.0    4.6  5  PF13181.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.017   14.7   0.0        1.1    9.1   0.0    3.3  2  PF13176.1  Tetratricopeptide repeat
      0.045   13.5   4.0        3.3    7.5   0.7    2.5  2  PF13371.1  Tetratricopeptide repeat
       0.19   11.0   1.7        3.1    7.0   0.0    2.5  2  PF13525.1  Outer membrane lipoprotein


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       8.5   8.3e+03       5      15 ..     112     122 ..     111     123 .. 0.78
   2 !   44.9   0.3     6e-15   5.9e-12       1      36 []     397     432 .]     397     432 .] 1.00

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 8.5
                 HHHHHHTSS-H CS
  PF02209.14   5 edFeevFgMtk 15 
                 + F +v++M  
  MMETSP1325-20131115|9513_1 112 DTFLRVLNMDP 122
                 66999**9965 PP

  == domain 2    score: 44.9 bits;  conditional E-value: 6e-15
                 GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT-- CS
  PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgLF 36 
                 YLsd +Fe+v g tkee+++ P+WK+++ K+k+gLF
  MMETSP1325-20131115|9513_1 397 YLSDAEFEQVTGYTKEEWAEVPKWKKQNVKRKHGLF 432
                 9*********************************** PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0       0.1        97      18      34 .]       2      18 ..       1      18 [. 0.91
   2 !   10.9   0.0   0.00033      0.32       3      34 .]      24      55 ..      23      55 .. 0.95
   3 ?    2.6   0.0      0.15   1.4e+02       6      28 ..      61      83 ..      58      84 .. 0.86
   4 !   23.2   0.0   3.6e-08   3.5e-05       1      34 []      91     124 ..      91     124 .. 0.96
   5 ?   -2.0   0.1       4.4   4.3e+03      19      29 ..     129     139 ..     126     141 .. 0.85
   6 ?   -0.6   0.1       1.5   1.5e+03       7      16 ..     204     213 ..     204     214 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.1
                HHHHHHHHHHHHH-TTS CS
  PF07719.12 18 eeAleafekAleldPnn 34
                + A+e+f+ A +++P+n
  MMETSP1325-20131115|9513_1  2 DGAIEYFDGAMKYAPGN 18
                68*************87 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00033
                HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAleldPnn 34
                +lyn +la+++l++  +A++ +   ++ +P++
  MMETSP1325-20131115|9513_1 24 ILYNKALALIQLDRIPDAIKELLDTIRKYPDH 55
                59*************************99986 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.15
                HHHHHHHHTT-HHHHHHHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAleafekAl 28
                +l+++y+ l+d+  A++ +e +l
  MMETSP1325-20131115|9513_1 61 ALAQLYLMLDDLVPAIKQLEVVL 83
                79***********9999998666 PP

  == domain 4    score: 23.2 bits;  conditional E-value: 3.6e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 a++ ynlG ay+k+++ ++A++ f ++l  dP++
  MMETSP1325-20131115|9513_1  91 ADLMYNLGVAYFKKDRIADARDTFLRVLNMDPEH 124
                 6789****************************86 PP

  == domain 5    score: -2.0 bits;  conditional E-value: 4.4
                 HHHHHHHHHHH CS
  PF07719.12  19 eAleafekAle 29 
                 eAl+a++k l+
  MMETSP1325-20131115|9513_1 129 EALAAMDKLLA 139
                 89999999986 PP

  == domain 6    score: -0.6 bits;  conditional E-value: 1.5
                 HHHHHHHTT- CS
  PF07719.12   7 lGlayyklgd 16 
                 lG+ yy+lgd
  MMETSP1325-20131115|9513_1 204 LGKGYYRLGD 213
                 6888999887 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.2   2.2e-06    0.0021      20      60 ..       2      44 ..       1      45 [. 0.91
   2 !   17.9   0.3   1.6e-06    0.0016       6      66 ..      25      84 ..      24      87 .. 0.94
   3 !   16.5   0.4   4.2e-06    0.0041       1      45 [.      89     133 ..      89     149 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 2.2e-06
   PF13414.1 20 deAieayekAleldpnnae...lyynlAlaylklgkdyeeAled 60
                d+Aie+++ A+++ p na    ++yn Ala+++l ++  +A+++
  MMETSP1325-20131115|9513_1  2 DGAIEYFDGAMKYAPGNAAqrvILYNKALALIQL-DRIPDAIKE 44
                79***************999*************9.678889876 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 1.6e-06
   PF13414.1  6 lkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66
                l++++ al+++ +  +Ai+++   ++  p++  +  +lA++yl+l +d + A++ +e +le
  MMETSP1325-20131115|9513_1 25 LYNKALALIQLDRIPDAIKELLDTIRKYPDHMPAREALAQLYLML-DDLVPAIKQLEVVLE 84
                789*****************************************9.689*****9998887 PP

  == domain 3    score: 16.5 bits;  conditional E-value: 4.2e-06
   PF13414.1   1 enAealkelGnalfkegdydeAieayekAleldpnnaelyynlAl 45 
                 e+A+  ++lG a+fk+ + ++A + + + l +dp++  +  +lA+
  MMETSP1325-20131115|9513_1  89 EQADLMYNLGVAYFKKDRIADARDTFLRVLNMDPEHERAIEALAA 133
                 579999******************************988777776 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0      0.04        39      14      36 ..       2      24 ..       1      27 [. 0.86
   2 !   26.2   0.1   8.5e-09   8.3e-06       1      58 [.      26      83 ..      26      89 .. 0.93
   3 !   13.9   0.0   5.8e-05     0.057      16      64 ..      75     124 ..      75     125 .. 0.77
   4 ?    0.6   0.1      0.88   8.5e+02      13      38 ..     127     153 ..     123     156 .. 0.71
   5 ?   -1.5   0.8       4.1     4e+03      45      62 ..     345     362 ..     339     365 .. 0.58

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.04
   PF13432.1 14 deAlaaleaalalaPeaaealll 36
                d A+++++ a+++aP++a  +  
  MMETSP1325-20131115|9513_1  2 DGAIEYFDGAMKYAPGNAAQRVI 24
                67**************9988765 PP

  == domain 2    score: 26.2 bits;  conditional E-value: 8.5e-09
   PF13432.1  1 lalArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraal 58
                + +A+al+++ +  +A++ l + ++++P++  a+ +la+++l+l +l  A++ l+  l
  MMETSP1325-20131115|9513_1 26 YNKALALIQLDRIPDAIKELLDTIRKYPDHMPAREALAQLYLMLDDLVPAIKQLEVVL 83
                789************************************************8888775 PP

  == domain 3    score: 13.9 bits;  conditional E-value: 5.8e-05
   PF13432.1  16 Alaaleaalala.PeaaeallllaeallrlgrldeAaallraalalaPdd 64 
                 A+++le +l+++  e a+ +++l++a++++ r ++A+  + + l  +P +
  MMETSP1325-20131115|9513_1  75 AIKQLEVVLEDPeLEQADLMYNLGVAYFKKDRIADARDTFLRVLNMDPEH 124
                 5666655566666669*********************6666666888765 PP

  == domain 4    score: 0.6 bits;  conditional E-value: 0.88
   PF13432.1  13 ydeAlaaleaalala.Peaaealllla 38 
                   eAlaa +++la   +++a+a    +
  MMETSP1325-20131115|9513_1 127 AIEALAAMDKLLAMKkYGHADANRTKG 153
                 457888888888888888888876655 PP

  == domain 5    score: -1.5 bits;  conditional E-value: 4.1
   PF13432.1  45 grldeAaallraalalaP 62 
                 g  + Aaa  +aa+ + P
  MMETSP1325-20131115|9513_1 345 GSAALAAAEEEAAAPAEP 362
                 555666666666655555 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       5.9   5.8e+03      17      32 ..       2      17 ..       1      18 [. 0.79
   2 !   10.3   0.0   0.00072      0.71       3      33 .]      25      55 ..      23      55 .. 0.96
   3 ?    1.1   0.0      0.64   6.2e+02       6      28 ..      62      84 ..      60      86 .. 0.90
   4 !   17.0   0.0   5.5e-06    0.0053       1      32 [.      92     123 ..      92     124 .. 0.92
   5 ?   -2.2   0.1       6.8   6.7e+03      18      27 ..     129     138 ..     125     139 .. 0.74

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 5.9
                HHHHHHHHHHHHH-TT CS
   PF13174.1 17 deAlealerlikeyPd 32
                d A+e+++   k  P+
  MMETSP1325-20131115|9513_1  2 DGAIEYFDGAMKYAPG 17
                789***9988777775 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00072
                HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT- CS
   PF13174.1  3 lyklalsyyklgdtdeAlealerlikeyPdS 33
                ly+ al++++l++  +A++ l + i++yPd+
  MMETSP1325-20131115|9513_1 25 LYNKALALIQLDRIPDAIKELLDTIRKYPDH 55
                9*********99*****************96 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.64
                HHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAlealerlik 28
                la++y++l+d   A++ le +++
  MMETSP1325-20131115|9513_1 62 LAQLYLMLDDLVPAIKQLEVVLE 84
                799****99*******9999987 PP

  == domain 4    score: 17.0 bits;  conditional E-value: 5.5e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   1 dAlyklalsyyklgdtdeAlealerlikeyPd 32 
                 d +y+l+ +y+k ++ ++A++++ r+++  P+
  MMETSP1325-20131115|9513_1  92 DLMYNLGVAYFKKDRIADARDTFLRVLNMDPE 123
                 569*********99*************99997 PP

  == domain 5    score: -2.2 bits;  conditional E-value: 6.8
                 HHHHHHHHHH CS
   PF13174.1  18 eAlealerli 27 
                 eAl+a+++l+
  MMETSP1325-20131115|9513_1 129 EALAAMDKLL 138
                 7888888887 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.8   2.8e+03      19      25 ..       3       9 ..       2      18 .. 0.68
   2 !    7.1   0.0     0.004       3.9       3      22 ..      24      43 ..      23      54 .. 0.94
   3 ?   -0.5   0.0      0.95   9.3e+02       7      22 ..      62      77 ..      61      80 .. 0.88
   4 !   21.3   0.0   1.3e-07   0.00013       1      34 []      91     124 ..      91     124 .. 0.95
   5 ?   -2.7   0.1       5.1   4.9e+03       2       8 ..     206     212 ..     205     213 .. 0.75

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 2.8
                HHHHHHH CS
  PF00515.23 19 eAleyye 25
                 A+ey++
  MMETSP1325-20131115|9513_1  3 GAIEYFD 9 
                599**97 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.004
                HHHHHHHHHHHTT-HHHHHH CS
  PF00515.23  3 alynlGnaylklgkydeAle 22
                +lyn+++a+ +l +  +A++
  MMETSP1325-20131115|9513_1 24 ILYNKALALIQLDRIPDAIK 43
                69****************97 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.95
                HHHHHHHTT-HHHHHH CS
  PF00515.23  7 lGnaylklgkydeAle 22
                l+++yl l ++  A++
  MMETSP1325-20131115|9513_1 62 LAQLYLMLDDLVPAIK 77
                899*******999997 PP

  == domain 4    score: 21.3 bits;  conditional E-value: 1.3e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALelnPnn 34 
                 a+  ynlG+ay+k+ +  +A + + ++L  +P++
  MMETSP1325-20131115|9513_1  91 ADLMYNLGVAYFKKDRIADARDTFLRVLNMDPEH 124
                 6788****************************86 PP

  == domain 5    score: -2.7 bits;  conditional E-value: 5.1
                 HHHHHHH CS
  PF00515.23   2 kalynlG 8  
                 k +y+lG
  MMETSP1325-20131115|9513_1 206 KGYYRLG 212
                 5788888 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       1.1     1e+03      18      36 ..       2      20 ..       1      26 [. 0.86
   2 !   16.5   0.2   8.6e-06    0.0084       4      44 .]      25      65 ..      22      65 .. 0.93
   3 ?    6.3   0.2     0.016        16       3      36 ..      58      90 ..      57     100 .. 0.75
   4 !   14.3   0.1   4.3e-05     0.042       4      43 ..      94     133 ..      91     134 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 1.1
   PF13428.1 18 deAiallrralalaPddae 36
                d+Ai++++ a + aP++a+
  MMETSP1325-20131115|9513_1  2 DGAIEYFDGAMKYAPGNAA 20
                89********999999975 PP

  == domain 2    score: 16.5 bits;  conditional E-value: 8.6e-06
   PF13428.1  4 llalarallalGdpdeAiallrralalaPddaealllLarl 44
                l+  a al++l +  +Ai+ l + ++++Pd+  a+ +La+l
  MMETSP1325-20131115|9513_1 25 LYNKALALIQLDRIPDAIKELLDTIRKYPDHMPAREALAQL 65
                567799*********************************97 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.016
   PF13428.1  3 allalarallalGdpdeAiallrralalaPddae 36
                a+ ala+++l l d+  Ai++l+ +l+ +P+ ++
  MMETSP1325-20131115|9513_1 58 AREALAQLYLMLDDLVPAIKQLEVVLE-DPELEQ 90
                6779*******************9888.554333 PP

  == domain 4    score: 14.3 bits;  conditional E-value: 4.3e-05
   PF13428.1   4 llalarallalGdpdeAiallrralalaPddaealllLar 43 
                  + l+ a++   + ++A++ + r+l  +P++++a  +La+
  MMETSP1325-20131115|9513_1  94 MYNLGVAYFKKDRIADARDTFLRVLNMDPEHERAIEALAA 133
                 5789*********************************996 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.094        92      46      69 ..      22      45 ..       2      54 .. 0.54
   2 !    7.2   0.0    0.0043       4.2       7      74 ..      24      84 ..      16      87 .. 0.84
   3 !   17.2   0.1   3.3e-06    0.0032      11      76 ..      62     121 ..      57     123 .. 0.75
   4 !   15.5   0.1   1.1e-05     0.011       4      35 ..      90     121 ..      85     142 .. 0.72
   5 ?   -1.3   0.0       1.9   1.9e+03      19      41 ..     125     146 ..     123     150 .. 0.70

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.094
   PF13424.1 46 aralnnlanlylalgdydeAleyl 69
                 ++l+n a ++ +l +  +A++ l
  MMETSP1325-20131115|9513_1 22 RVILYNKALALIQLDRIPDAIKEL 45
                456666666666666666665544 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0043
   PF13424.1  7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74
                il+n al+l +l +  +A+   ++ l+ +r+++d+ p    a   la+lyl l d+  A++ le +le
  MMETSP1325-20131115|9513_1 24 ILYNKALALIQLDRIPDAI---KELLDTIRKYPDHMP----AREALAQLYLMLDDLVPAIKQLEVVLE 84
                899****************...557777788886655....688999999999999999999988775 PP

  == domain 3    score: 17.2 bits;  conditional E-value: 3.3e-06
   PF13424.1  11 lalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                 la+++++l d+  A++ +e +le         ++ a++++nl+ +y ++ + ++A++ + ++l+++
  MMETSP1325-20131115|9513_1  62 LAQLYLMLDDLVPAIKQLEVVLED------PELEQADLMYNLGVAYFKKDRIADARDTFLRVLNMD 121
                 666666666666666555555544......247889999999999999999999999999999986 PP

  == domain 4    score: 15.5 bits;  conditional E-value: 1.1e-05
   PF13424.1   4 latilnnlalvlrrlgdydeAlelyekalell 35 
                  a++++nl+ +++++ +  +A++ + ++l++ 
  MMETSP1325-20131115|9513_1  90 QADLMYNLGVAYFKKDRIADARDTFLRVLNMD 121
                 57778888888888888888888888888773 PP

  == domain 5    score: -1.3 bits;  conditional E-value: 1.9
   PF13424.1  19 gdydeAlelyekalellrelgdd 41 
                 ++  eAl+   k l++  ++g++
  MMETSP1325-20131115|9513_1 125 ERAIEALAAMDKLLAMK-KYGHA 146
                 67778888888888884.56655 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.5   1.5e+03      16      32 ..      25      41 ..      11      43 .. 0.72
   2 ?    4.8   0.0     0.035        34       5      29 ..      48      72 ..      44      78 .. 0.87
   3 !   11.5   0.0   0.00025      0.25      13      33 ..      91     111 ..      79     112 .. 0.86
   4 ?   -1.8   0.0       4.6   4.5e+03       2      19 ..     114     131 ..     113     134 .. 0.70

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 1.5
   PF13431.1 16 ynnLAelllnnGdleeA 32
                ++n+A++l  + +  +A
  MMETSP1325-20131115|9513_1 25 LYNKALALIQLDRIPDA 41
                67777777776666666 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.035
   PF13431.1  5 aleldPnnadaynnLAelllnnGdl 29
                 ++++P++ +a+ +LA+l+l + dl
  MMETSP1325-20131115|9513_1 48 TIRKYPDHMPAREALAQLYLMLDDL 72
                58999**************998875 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 0.00025
   PF13431.1  13 adaynnLAelllnnGdleeAe 33 
                 ad+++nL+++++++ + ++A+
  MMETSP1325-20131115|9513_1  91 ADLMYNLGVAYFKKDRIADAR 111
                 9****************9998 PP

  == domain 4    score: -1.8 bits;  conditional E-value: 4.6
   PF13431.1   2 yekaleldPnnadaynnL 19 
                 +++ l+ dP++  a  +L
  MMETSP1325-20131115|9513_1 114 FLRVLNMDPEHERAIEAL 131
                 788888899876555555 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0    0.0001       0.1       8      82 ..       4      80 ..       1      82 [. 0.86
   2 !    6.6   0.1    0.0077       7.5      19      77 ..      85     146 ..      75     148 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.0001
                HHHHHHHHCCC-ST-H.HHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHH CS
   PF12895.2  8 Alflaekllaespkdp.edaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLe 82
                A+ +++ +++ +p +  + + ly++Al+l ++ +   A++ l +     + ++ +r  lA+ +l l+++  Ai+ Le
  MMETSP1325-20131115|9513_1  4 AIEYFDGAMKYAPGNAaQRVILYNKALALIQLDRIPDAIKELLDtIRKYPDHMPAREALAQLYLMLDDLVPAIKQLE 80
                88899999999997667888******************998877777777789*************99999988776 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0077
                 -ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCB.HHHHHHHH.HHHHHTT-HHHH CS
   PF12895.2  19 spkdpedaylyalAlclylngeykrAyellrk.leldsss.lgcryllA.rcllklgkydeA 77 
                 +p+ ++++ +y+l+ ++++  +   A + + + l++d+++  ++  l+A   ll+++ky  A
  MMETSP1325-20131115|9513_1  85 DPELEQADLMYNLGVAYFKKDRIADARDTFLRvLNMDPEHeRAIEALAAmDKLLAMKKYGHA 146
                 354337889999**************99888889***9993444447778999999999765 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.31   3.1e+02      18      32 ..       2      16 ..       1      18 [. 0.86
   2 ?    3.6   0.0     0.063        61       3      24 ..      24      45 ..      22      54 .. 0.89
   3 ?   -0.3   0.0       1.1     1e+03       3      24 ..      58      79 ..      56      84 .. 0.77
   4 !    9.5   0.0   0.00081      0.79       3      32 ..      93     122 ..      91     124 .. 0.92
   5 ?   -3.3   0.0       9.5   9.3e+03       3       9 ..     207     213 ..     206     213 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.31
                HHHHHHHH---HHHH CS
   PF13181.1 18 dkAkeylekalelkp 32
                d A+ey+  a +++p
  MMETSP1325-20131115|9513_1  2 DGAIEYFDGAMKYAP 16
                679**********99 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.063
                -TTT---HHHHTT-HHHHHHHH CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeyl 24
                ++yn+++++ ql ++  A++ l
  MMETSP1325-20131115|9513_1 24 ILYNKALALIQLDRIPDAIKEL 45
                58*************9999866 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 1.1
                -TTT---HHHHTT-HHHHHHHH CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeyl 24
                a+ +l+++Y+ l d   A++ l
  MMETSP1325-20131115|9513_1 58 AREALAQLYLMLDDLVPAIKQL 79
                67789*****999987666655 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.00081
                 -TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkp 32 
                 + ynlG +Y+++ ++  A   + ++l ++p
  MMETSP1325-20131115|9513_1  93 LMYNLGVAYFKKDRIADARDTFLRVLNMDP 122
                 67************************9998 PP

  == domain 5    score: -3.3 bits;  conditional E-value: 9.5
                 -TTT--- CS
   PF13181.1   3 ayynlGd 9  
                  yy+lGd
  MMETSP1325-20131115|9513_1 207 GYYRLGD 213
                 6999997 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.27   2.7e+02      16      35 ..       2      19 ..       1      20 [. 0.89
   2 ?    9.1   0.0    0.0011       1.1       3      35 ..      95     125 ..      93     134 .. 0.93

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.27
   PF13176.1 16 ekAielyeraLaltkdplda 35
                + Aie++    a++++p++a
  MMETSP1325-20131115|9513_1  2 DGAIEYFDG--AMKYAPGNA 19
                67*******..*****9986 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0011
   PF13176.1   3 lnLarlysrlgdyekAielyeraLaltkdplda 35 
                 +nL+++y++  +  +A + + r  +l  dp+++
  MMETSP1325-20131115|9513_1  95 YNLGVAYFKKDRIADARDTFLR--VLNMDPEHE 125
                 7*********************..999999987 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2    0.0053       5.2      34      72 ..      27      65 ..      23      69 .. 0.86
   2 ?    7.5   0.7    0.0034       3.3       5      68 ..      66     130 ..      62     135 .. 0.73

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0053
   PF13371.1 34 DrGlllaqlgclaaAaedLeaflelcpdapdaeliraql 72
                  +l+l ql++   A+++L   + + pd+  a+ + aql
  MMETSP1325-20131115|9513_1 27 NKALALIQLDRIPDAIKELLDTIRKYPDHMPAREALAQL 65
                679********************9999777777766665 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0034
   PF13371.1   5 ylreedferALavverllllaPd..dpyerRDrGlllaqlgclaaAaedLeaflelcpdapdaeli 68 
                 yl  +d   A++ +e +l+ +P+  ++ + +  G ++++ ++ a A++ + + l+ +p+++ a  +
  MMETSP1325-20131115|9513_1  66 YLMLDDLVPAIKQLEVVLE-DPEleQADLMYNLGVAYFKKDRIADARDTFLRVLNMDPEHERAIEA 130
                 5555666666666666654.4545699999****************************76655433 PP

>> PF13525.1  Outer membrane lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0032       3.1      38      78 ..      85     127 ..      63     150 .. 0.79
   2 ?   -2.2   0.1       2.2   2.1e+03      35      67 ..     362     394 ..     347     398 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0032
   PF13525.1  38 gpyaeqaql..dliyAyykskdyeaaiataerFirlyPrhpnv 78 
                 +p  eqa l  +l  Ay+k++++++a  t  r +++ P+h+++
  MMETSP1325-20131115|9513_1  85 DPELEQADLmyNLGVAYFKKDRIADARDTFLRVLNMDPEHERA 127
                 455666654226999*************************986 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 2.2
   PF13525.1  35 yPfgpyaeqaqldliyAyykskdyeaaiataer 67 
                  P ++ya+ ++ld  y  +k++ +++++  aer
  MMETSP1325-20131115|9513_1 362 PPASKYADPSTLDCPYESLKEAPFPEGVNPAER 394
                 589999999999999999999988888877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.83u 0.34s 00:00:01.17 Elapsed: 00:00:00.55
# Mc/sec: 1882.23
//
Query:       MMETSP1325-20131115|9519_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.44s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|9520_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   12.7   0.1      0.056   12.7   0.1    1.2  1  PF11354.3 Protein of unknown function (DUF3156)


Domain annotation for each model (and alignments):
>> PF11354.3  Protein of unknown function (DUF3156)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   4.1e-06     0.056      50      81 ..       2      33 ..       1      53 [. 0.80

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.1e-06
   PF11354.3 50 aplaaqgsirvrqtGwlrRtgvaaalskgsda 81
                ++++++++ rvr++G+l+++g++ ++sk + +
  MMETSP1325-20131115|9520_1  2 GNTTPRMTTRVRASGALKKRGIITRTSKWTPT 33
                56788999****************99986654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.25u 0.42s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 231.65
//
Query:       MMETSP1325-20131115|9521_1  [L=416]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-39  134.4   0.0    4.4e-39  133.8   0.0    1.3  1  PF00117.23 Glutamine amidotransferase class-I
    3.9e-39  134.4   0.0    5.3e-39  133.9   0.0    1.2  1  PF00425.13 chorismate binding enzyme
    3.4e-10   39.6   0.0    6.1e-10   38.7   0.0    1.4  1  PF07722.8  Peptidase C26
  ------ inclusion threshold ------
      0.096   12.6   0.0         13    5.8   0.0    2.5  2  PF08774.6  VRR-NUC domain


Domain annotation for each model (and alignments):
>> PF00117.23  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.8   0.0   1.3e-42   4.4e-39       1     179 [.     202     394 ..     202     407 .. 0.92

  Alignments for each domain:
  == domain 1    score: 133.8 bits;  conditional E-value: 1.3e-42
                 EEEE-S-SSHHHHHHHHHHTT-EEEEEETTGGHHHH.................HHTTT--SEEEEE----TTTT-CCHHHHHHHHGTTTS-EE------HHHHHH-TTEEETTC.CSEEEEEEEEEETTT..SCCCTTTTSEEEEEE-ESEEECSGHHHHTTEEEEEEESSS-EEEEEEECSSSBEEESSBTTCTTS- CS
  PF00117.23   1 lliDnydsvtknleralrelgvkvevvpndadaeei.................leklsnpdgilisgGpgspgevegkieaikearenkiPiLGICLGmQllaiefggkvikekkeehmggnmrlghdgk..aallyglpnevivrhrHsyevnekellpeglevtaksedggeimaivekknpivgvQFHPEssstp 179
                 ll+D  ds+++ l ++lr+ g++v   +  ++a +i                   +   pd +++s+Gpg+p++  g  ++i++++e kiP++G+CLG+Q +++ fgg++   + ++++g+ + + ++g+   ++++glp++++v+++Hs++  + e+ p++l vta ++dg ++m+i +k+ p+ +vQFHPEs++t 
  MMETSP1325-20131115|9521_1 202 LLVDHQDSFVHTLGNYLRQTGAEVITARSGEPAMQIldlvaeeasgkpkddpeA-ETWIPDLVVLSPGPGNPSD-FGLTNTISKLIELKIPCFGVCLGLQGMVEHFGGTLGVLS-YPMHGKPSTVTLTGTppKGIFTGLPTKFEVARYHSLHGLP-ETFPDDLLVTARTDDG-VVMGIEHKTLPFAAVQFHPESILTN 394
                 589*************************999999999*********99766531.4678**************8.6888888999999***********************999.9***********999************************8.99***********777.9*********************986 PP

>> PF00425.13  chorismate binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.9   0.0   1.6e-42   5.3e-39     102     257 .]       3     158 ..       1     158 [. 0.98

  Alignments for each domain:
  == domain 1    score: 133.9 bits;  conditional E-value: 1.6e-42
  PF00425.13 102 alaeelledeKeraEhlmvvdlirndLgkvakpgsvkvpelfkverysevlhlvstiegelkedvslldllkalfPtgavtGaPkkrameiIdelEeedRgvYaGavgyldadgeadlavaIRtavvkdkelslgaGaGIvadSdpeaEyeEtlaK 257
                 ++ +e+l+++Ke +E  m++d  rnd ++++ pgsvkv   +++e ys+++h+v ++eg l+++ ++ld++    ++ +vtGaPkk a++++++ Ee++R++Y+Gavg++++dg++++ +++Rt++vk++ ++++aGa    dSdp aE +Et++K
  MMETSP1325-20131115|9521_1   3 QRIKEILANPKEESELTMCTDVDRNDKSRICVPGSVKVLGRRQIEMYSRLIHTVDHVEGYLRDGFDALDAFLCHTWAVTVTGAPKKWAIQFVERQEESPREWYGGAVGLVGFDGHLNTGLTLRTVFVKEGVARVRAGATLLFDSDPVAEEKETELK 158
                 56689****************************************************************************************************************************99**********************998 PP

>> PF07722.8  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.0   1.8e-13   6.1e-10      99     217 .]     281     389 ..     274     389 .. 0.81

  Alignments for each domain:
  == domain 1    score: 38.7 bits;  conditional E-value: 1.8e-13
                 HHHH------BB------HHHHHHH------EEE.............EEEEEEE--E...T-STTTTS-HHHS--EEEEEEE.E-BH.HHHH-EEEEEEE----EEEEEEE--S-B----S-TT CS
   PF07722.8  99 iraalergvPvlgiCrGlqllnvalggtlyqdikeepglsdhreheqdasshavsle...kgsllarllgaeeievnslHhq.aike.lakglevlAtaedgvieaieseeakyfvlgvQWHPE 217
                 i++ +e ++P++g+C+Glq +   +ggtl    +       h +        +v l+   + +++  l+   ++ev+ +H   ++ e   ++l v+A+ +dgv+  ie+++   ++ +vQ+HPE
  MMETSP1325-20131115|9521_1 281 ISKLIELKIPCFGVCLGLQGMVEHFGGTLGVLSYP-----MHGK------PSTVTLTgtpPKGIFTGLPT--KFEVARYHSLhGLPEtFPDDLLVTARTDDGVVMGIEHKT--LPFAAVQFHPE 389
                 6678999**********************988773.....3322......33344444448999999988..9999999976234334999******************99..67********9 PP

>> PF08774.6  VRR-NUC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.011        39      48      71 ..     259     290 ..     212     292 .. 0.80
   2 ?    5.8   0.0    0.0037        13      33      70 ..     341     378 ..     315     385 .. 0.76

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.011
   PF08774.6  48 vPDlilwlpegkrp........ifllvEvKgp 71 
                 +PDl+++ p+   p        i +l+E+K p
  MMETSP1325-20131115|9521_1 259 IPDLVVLSPGPGNPsdfgltntISKLIELKIP 290
                 8******999987799*****99******966 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0037
   PF08774.6  33 ealaklfrkrglrsGvPDlilwlpegkrpifllvEvKg 70 
                  + a++ +  gl   +PD +l+  +++ ++++ +E K+
  MMETSP1325-20131115|9521_1 341 FEVARYHSLHGLPETFPDDLLVTARTDDGVVMGIEHKT 378
                 3344565659****************999******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       416  (0.0304272); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.45s 00:00:01.11 Elapsed: 00:00:00.49
# Mc/sec: 2034.46
//
Query:       MMETSP1325-20131115|9522_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00088   18.8   0.0     0.0028   17.2   0.0    1.8  1  PF01641.13 SelR domain


Domain annotation for each model (and alignments):
>> PF01641.13  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.1e-07    0.0028      28     116 ..      87     175 ..      79     182 .. 0.70

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.1e-07
                 TTTS------..EEETT---EEE-C.....CCS--S--...---EES-.-STTTSEEEEEEE----EEEEEEETTC-TT---EE-------.--EEE--T CS
  PF01641.13  28 eykkkkeeGi..yvcivcgeplfks.....kdkfdsgc...GWPsFse.piseeaikekedeslgmkRvevrcakcdahLGhvfkdGpkektgeRyCins 116
                  y++  e+Gi  + + vcg plf +      d f++++   GWPsF + ++ ee++ + e++          + +c++hLG  + d     +g R+Ci+ 
  MMETSP1325-20131115|9522_1  87 MYEHLDESGIttFYDSVCGLPLFVApmnrtLDEFKADTdehGWPSFRQeEVVEENVVTDEETG-------YVTSACGTHLGSYLPD----AEGARWCIDL 175
                 5788888886558899******9752222257899875555*****75156666665555555.......456789*****98766....4588999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.57
# Mc/sec: 1173.39
//
Query:       MMETSP1325-20131115|9525_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 488.49
//
Query:       MMETSP1325-20131115|9523_1  [L=439]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0087   15.4   0.2      0.014   14.7   0.2    1.3  1  PF14187.1 Domain of unknown function (DUF4310)
  ------ inclusion threshold ------
      0.045   13.1   0.0        0.1   12.0   0.0    1.5  1  PF08142.7 AARP2CN (NUC121) domain


Domain annotation for each model (and alignments):
>> PF14187.1  Domain of unknown function (DUF4310)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.2   2.1e-06     0.014     119     199 ..      85     169 ..      66     173 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.1e-06
   PF14187.1 119 avlGliiGlviilirkfti.nqsnstfGadimmG...aGnasGrflGpliilsavaasipiGiGsliGaalfykldkpiaGGail 199
                 ++ G++ G +++ ++ + + n++n+t+ a+++     aG   G  +Gp  i+ a   s p+ + s +   + y  +k  +G  +l
  MMETSP1325-20131115|9523_1  85 VIAGFVAGSLVVEVQLVQLtNETNATAAAGVLEAkalAGTLLGADFGPCAIVHASVESTPVQVASDVQYDVIYDTEKVQVGTKVL 169
                 35699******999987652678888889887543337888888899*****************************998887765 PP

>> PF08142.7  AARP2CN (NUC121) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.5e-05       0.1      20      68 ..      42     105 ..      29     110 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.5e-05
   PF08142.7  20 reqrgyiladrleietseeekekek...............rtvvveGyvrGaklkanqlvhipg 68 
                 r ++  + a+rle+et e   e+ +               ++vv+ G+v G+ +   qlv++++
  MMETSP1325-20131115|9523_1  42 RVNHQVVCALRLEDETPEAFVEERQvafvaaladslgldkGQVVIAGFVAGSLVVEVQLVQLTN 105
                 7899************9999998889**********************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.79u 0.38s 00:00:01.17 Elapsed: 00:00:00.52
# Mc/sec: 2023.08
//
Query:       MMETSP1325-20131115|9528_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|9526_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.004   16.8   0.0     0.0074   15.9   0.0    1.5  1  PF12695.2 Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.021   14.6   0.0      0.038   13.7   0.0    1.4  1  PF12697.2 Alpha/beta hydrolase family
      0.036   13.3   0.1       0.09   12.0   0.0    1.7  1  PF03959.8 Serine hydrolase (FSH1)


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.6e-06    0.0074      94     130 ..      27      63 ..       4      78 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.6e-06
   PF12695.2  94 gedlakltlpvllihGtrDgvvppeeaeklakalpgd 130
                 +e +++ ++p+++++G+ D+v+ p+++++l++a pg 
  MMETSP1325-20131115|9526_1  27 MEYMPTCQVPTFFLNGDTDKVIHPHHSADLFNAHPGE 63 
                 566778899************************9943 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   8.4e-06     0.038     164     216 ..      22      78 ..       3      90 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 8.4e-06
                 -----HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTT.....EEEEE---SSSS CS
   PF12697.2 164 ldadlrealarldvPvlviageaDrvvppeearrlaealpg.....arvvvlpgagHl 216
                 +d ++ e+++  +vP+ ++ g+ D+v++p++ + l +a pg     ++ +v++ +gH+
  MMETSP1325-20131115|9526_1  22 EDVSPMEYMPTCQVPTFFLNGDTDKVIHPHHSADLFNAHPGevpsrKQRKVVS-GGHN 78 
                 556677999***************************99998666667889998.8886 PP

>> PF03959.8  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     2e-05      0.09     155     190 ..      29      63 ..       7      79 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2e-05
   PF03959.8 155 yeedkiqtpsLhvlGelDtvvdeerseaLaeafkns 190
                 y  ++ q+p+++  G++D+v+ ++ s +L +a+ ++
  MMETSP1325-20131115|9526_1  29 Y-MPTCQVPTFFLNGDTDKVIHPHHSADLFNAHPGE 63 
                 3.4778************************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 1021.60
//
Query:       MMETSP1325-20131115|9530_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.4    9.0   0.0        1.4    9.0   0.0    2.4  2  PF11332.3 Protein of unknown function (DUF3134)
        3.3    7.4  14.4         63    3.2   0.0    2.0  2  PF11705.3 DNA-directed RNA polymerase III subunit Rpc31


Domain annotation for each model (and alignments):
>> PF11332.3  Protein of unknown function (DUF3134)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.5   5.8         2   1.4e+04      53      68 ..       7      20 ..       1      28 [. 0.42
   2 ?    9.0   0.0    0.0002       1.4      34      68 ..      75     109 ..      69     114 .. 0.75

  Alignments for each domain:
  == domain 1    score: -5.5 bits;  conditional E-value: 2
   PF11332.3 53 iseLigededykdd.dd 68
                 +e   + ++y+d+ d+
  MMETSP1325-20131115|9530_1  7 EEE---SADEYDDEfDE 20
                222...22333333333 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0002
   PF11332.3  34 LiareeselqeesteeeeeiseLigededykdd.dd 68 
                 Li+ ee++  +      +eis++++  ed++d+ +d
  MMETSP1325-20131115|9530_1  75 LIPLEEKAH-TGLFYTGDEISAFMDYAEDIEDYcKD 109
                 666666664.66666779*************98554 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   9.9     0.014        98     186     221 ..       2      35 ..       1      46 [. 0.79
   2 ?    3.2   0.0    0.0093        63      58      80 ..      75      98 ..      69     117 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.014
   PF11705.3 186 eeeeeeeeedddfeDdddddedDYnaekYFDnGedD 221
                 eeeeeeee  d++ Dd+ d edD++ e    +Ge+D
  MMETSP1325-20131115|9530_1   2 EEEEEEEESADEY-DDEFD-EDDFEVEANLTEGEGD 35 
                 6788888888888.55554.6999999888888887 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.0093
   PF11705.3 58 yielrktlkdgpfytgse.slvqd 80
                 i l ++ ++g fytg+e s  +d
  MMETSP1325-20131115|9530_1 75 LIPLEEKAHTGLFYTGDEiSAFMD 98
                5778999*********99444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       554  (0.0405208); expected 273.4 (0.02)
Passed bias filter:                      466  (0.0340843); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|9531_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.59
# Mc/sec: 393.98
//
Query:       MMETSP1325-20131115|9527_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       549  (0.0401551); expected 273.4 (0.02)
Passed bias filter:                      496  (0.0362785); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|9533_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.42s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|9537_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.9   0.6       0.42   10.0   0.1    1.8  2  PF07490.6 Translocated intimin receptor (Tir) N-terminus


Domain annotation for each model (and alignments):
>> PF07490.6  Translocated intimin receptor (Tir) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1     3e-05      0.42     198     231 ..       8      42 ..       3      47 .. 0.84
   2 ?    1.0   0.0     0.018   2.4e+02       4      21 ..      44      61 ..      42      64 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 3e-05
   PF07490.6 198 esesgavnsaetkvvsetstststss.lrsdpklw 231
                 ++ s++v +ae+  + ++st+ +ts+ lrsdp l+
  MMETSP1325-20131115|9537_1   8 QETSTDVAAAEAAGAYDASTAHATSAlLRSDPSLF 42 
                 5678999999*99999*****9999846****997 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.018
   PF07490.6  4 gnlghnsnvnalippapp 21
                g  gh+ nv+++ pp p 
  MMETSP1325-20131115|9537_1 44 GTWGHQFNVSRTSPPHPA 61
                788************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|9538_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 474.06
//
Query:       MMETSP1325-20131115|9535_1  [L=409]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-12   47.4   0.0    3.3e-12   46.9   0.0    1.4  1  PF08613.6  Cyclin
    2.8e-11   42.9   0.1    4.5e-11   42.2   0.1    1.3  1  PF00134.18 Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> PF08613.6  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   4.8e-16   3.3e-12      41     148 ..     174     282 ..      53     283 .. 0.76

  Alignments for each domain:
  == domain 1    score: 46.9 bits;  conditional E-value: 4.8e-16
                 ...T--SS-.-SS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH..H-TT---STTTHHHHHHHHHHHHH----SS---HHHHHH--.---HHHHHHHHHHHHHHTTT- CS
   PF08613.6  41 essFatkav.paislgsylsrlqkfgesaplvllgaliYldrivkrcdkeassvtsanvyRLllvallvatKflvDlsysnekfakvg.gislkeLnkLEidFlflvdFd 148
                  s+  +  v p  +l++++  +   +++++++ + aliY++ri k + + a+ v   n+  L+l  l++a+K+ +Dls+ n+ f++v     lk +n+LE+  l ++ ++
  MMETSP1325-20131115|9535_1 174 RSASDADSVpPMSELVKFFRDVYINSQMETDCIIMALIYMERITK-ETRGAIRVRGHNWKSLVLSSLIMASKVWDDLSMWNSDFSQVCpSFTLKRINELELAMLDVLRYN 282
                 3333333332555699999999999********************.999*************************************97479**********999888776 PP

>> PF00134.18  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.1   6.6e-15   4.5e-11      31     126 ..     185     283 ..     162     284 .. 0.89

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 6.6e-15
                 HHHHHHHHHHHHHCTT--CCCHHHHHHHHHHHHCC-.....--CCCCTT---HHHHHHHCCC-SS---CHHHHCHTTSSS-CCHHHHHHHHHHHHCTT-- CS
  PF00134.18  31 rsilidwlvevsekfklspetlylavnyldRflskrs....vkrkklqlvgvtcLllAaKveeirppeledlvyitdgaytkeeilqmErliLstLnfdl 126
                  s+l+++  +v  + +++++++++a  y++R  ++      v+ ++++ +++++L++A+Kv ++  ++++d+  ++   +t + i+++E+ +L+ L +++
  MMETSP1325-20131115|9535_1 185 MSELVKFFRDVYINSQMETDCIIMALIYMERITKETRgairVRGHNWKSLVLSSLIMASKVWDDLSMWNSDFSQVC-PSFTLKRINELELAMLDVLRYNV 283
                 5789*****************************99967899**********************************9.479******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.38s 00:00:01.10 Elapsed: 00:00:00.52
# Mc/sec: 1884.83
//
Query:       MMETSP1325-20131115|9536_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-07   30.5  16.0    5.4e-07   30.0  11.1    1.3  1  PF04749.12 PLAC8 family


Domain annotation for each model (and alignments):
>> PF04749.12  PLAC8 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0  11.1     4e-11   5.4e-07       8     104 ..      85     221 ..      77     223 .. 0.74

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 4e-11
  PF04749.12   8 cfddig..lcllslfcpcvlfgknaerlgngsksehsa..lgscllaflllglla................ll..al..lllysallRtkiRekyni..................egsacdDclvhlfcppcalcQesr 104
                 c+d +    c+++++cp++l + + ++l    k++         l+ +++++ +                 ++  ++   +++ + lR   Re y i                  ++ +c+Dc+  +fc+pc+l+Q + 
  MMETSP1325-20131115|9536_1  85 CCDGCCrnECCCAWCCPFCLIAIINKKLHLSGKQVLIEstS--NLMIAMIALYVLdemivpnlfpfadytnVIspGTvfAGVILGHLRYLAREHYAIpvgtkrccevtqedgwlsNSPCCADCMNSTFCQPCVLMQLNA 221
                 55433223799*************99998877666555432..22222222222257899999999998773356443344477*****************************97778******************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       650  (0.0475424); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.54
# Mc/sec: 1087.24
//
Query:       MMETSP1325-20131115|9541_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 1458.65
//
Query:       MMETSP1325-20131115|9543_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.07   12.6   5.7      0.082   12.3   3.9    1.0  1  PF04546.8  Sigma-70, non-essential region
       0.42   10.5   5.4       0.47   10.3   3.8    1.0  1  PF08432.5  Fungal protein of unknown function (DUF1742)
       0.57    9.0   2.8       0.61    8.9   1.9    1.0  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
       0.89    8.0   5.8       0.91    8.0   4.0    1.0  1  PF10446.4  Protein of unknown function (DUF2457)
        1.2    8.9   7.3        1.2    8.9   5.1    1.0  1  PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
        1.6    7.1   5.8        1.7    7.0   4.0    1.0  1  PF13148.1  Protein of unknown function (DUF3987)
          2    8.2   6.7        2.5    7.9   4.6    1.2  1  PF05680.7  ATP synthase E chain
        4.9    6.5   7.8         58    2.9   0.0    1.9  2  PF03286.9  Pox virus Ag35 surface protein


Domain annotation for each model (and alignments):
>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   3.9   4.8e-05     0.082      10      66 ..       7      69 ..       3      74 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.8e-05
   PF04546.8 10 eqydrveagelrlsdlisGfidpaaaaeeeeaeeeseddeeeeed......dddddededeee 66
                +++d v + ++   +li G i+ +a+ae+++++e+++++++e+e+      + ddd + +eee
  MMETSP1325-20131115|9543_1  7 MMVDAVLKKRIPAVKLILGDIEAEAEAEAKAKAEAEAKAKAEKEEkealkaSADDDGEGEEEE 69
                667777888887788888989984444444444444444444333456665334443333332 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.8   0.00028      0.47      71     116 ..      24      69 ..       8      73 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00028
   PF08432.5  71 iekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekekek 116
                 + ++++e e++ kak+e+++k k +++eke  k ++dd+ e e+e+
  MMETSP1325-20131115|9543_1  24 LGDIEAEAEAEAKAKAEAEAKAKAEKEEKEALKASADDDGEGEEEE 69 
                 5567788888888888877776666666666666665555444443 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.9   0.00036      0.61      15      67 ..      17      68 ..       4      74 .. 0.52

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00036
  PF03896.11 15 lpavlllvgavkklaasaqdltedeeaeddvvdedeedeaeveedekteaeee 67
                +pav l++g+++++a+++ +++++ ea+++ ++e++e  +  ++d   e eee
  MMETSP1325-20131115|9543_1 17 IPAVKLILGDIEAEAEAEAKAKAEAEAKAKAEKEEKEALKASADD-DGEGEEE 68
                566666677777666666555555554444444443333333333.2333333 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   4.0   0.00053      0.91      23      82 ..       4      68 ..       1      74 [. 0.40

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00053
   PF10446.4 23 keklTlndtlkkelairkl.....geeaeeealeeedededdeeddddeDeddddddddeDdedd 82
                k ++ ++  lkk +   kl       eae ea  + + +   ++++++ +  ++  ddd + e++
  MMETSP1325-20131115|9543_1  4 KLRMMVDAVLKKRIPAVKLilgdiEAEAEAEAKAKAEAEAKAKAEKEEKEALKASADDDGEGEEE 68
                55677777777777555542221123333333333333333333333333333333333222222 PP

>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   5.1   0.00069       1.2     142     204 ..      11      69 ..       1      73 [. 0.53

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00069
   PF11705.3 142 skfkkkadlkkfaeedeeeklsalekkekeldaedeeeedkkee.....eeeeeeeeedddfeDdddd 204
                   +kk+  + k    d+e++++a+ k + e++a+ + e+++ke+     +         dd e ++++
  MMETSP1325-20131115|9543_1  11 AVLKKRIPAVKLILGDIEAEAEAEAKAKAEAEAKAKAEKEEKEAlkasaD---------DDGEGEEEE 69 
                 56677777777777888888888774444444444333333333444443.........333333332 PP

>> PF13148.1  Protein of unknown function (DUF3987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.0   0.00099       1.7      68     107 ..      25      64 ..       5      73 .. 0.47

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00099
   PF13148.1  68 eelreeyeeelkeykaekeiweaekkglekkakkaakkgd 107
                  ++++e e+e k+  ++++ ++aek+++e+  ++a+++g+
  MMETSP1325-20131115|9543_1  25 GDIEAEAEAEAKAKAEAEAKAKAEKEEKEALKASADDDGE 64 
                 3444444444333333333344444444444334444442 PP

>> PF05680.7  ATP synthase E chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.6    0.0015       2.5      46      79 ..      28      60 ..      21      71 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0015
   PF05680.7 46 eaqekliekakaayakkkqakseakslaegssak 79
                ea+++  +kaka+ + k +a++e+k+++++s  +
  MMETSP1325-20131115|9543_1 28 EAEAEAEAKAKAEAEAKAKAEKEEKEALKASA-D 60
                55555556999999999999999999999983.3 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.034        58     145     162 ..      13      30 ..       9      33 .. 0.89
   2 ?    2.7   5.1     0.042        71      64      96 ..      37      69 ..      28      74 .. 0.53

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.034
   PF03286.9 145 lnarvsavstvLedvQAa 162
                 l++r+ av  +L d+ A 
  MMETSP1325-20131115|9543_1  13 LKKRIPAVKLILGDIEAE 30 
                 889************996 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.042
   PF03286.9 64 vkkkkskkkekekeeeeekkeeededkdteene 96
                +k + ++k++ ekee+e+ k + d+d + ee+e
  MMETSP1325-20131115|9543_1 37 AKAEAEAKAKAEKEEKEALKASADDDGEGEEEE 69
                334444455555666666666666666555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1305  (0.0954506); expected 273.4 (0.02)
Passed bias filter:                      902  (0.0659743); expected 273.4 (0.02)
Passed Vit filter:                       145  (0.0106056); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.47s 00:00:00.90 Elapsed: 00:00:00.63
# Mc/sec: 285.28
//
Query:       MMETSP1325-20131115|9544_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 244.24
//
Query:       MMETSP1325-20131115|9545_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-23   82.3   0.0    2.1e-23   82.2   0.0    1.0  1  PF00464.14 Serine hydroxymethyltransferase


Domain annotation for each model (and alignments):
>> PF00464.14  Serine hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.2   0.0   1.6e-27   2.1e-23      83     133 ..       2      52 ..       1      60 [. 0.93

  Alignments for each domain:
  == domain 1    score: 82.2 bits;  conditional E-value: 1.6e-27
                 TTT.EEE-------CCCHHHHHHHS----EEE------------------. CS
  PF00464.14  83 pakwgvnvqplsGsqanlavytallepgdrilgldladGGhlthGakvesk 133
                 p++wgvnvqp+sGs+an+avytall+p+dri+gldl+ GGhlthG+ + sk
  MMETSP1325-20131115|9545_1   2 PEEWGVNVQPYSGSPANFAVYTALLNPHDRIMGLDLPSGGHLTHGFYTYSK 52 
                 899******************************************988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|9546_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                       62  (0.00453482); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 365.99
//
Query:       MMETSP1325-20131115|9547_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|9548_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0061   15.6   0.1     0.0085   15.1   0.1    1.1  1  PF13203.1 Putative metallopeptidase domain


Domain annotation for each model (and alignments):
>> PF13203.1  Putative metallopeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   6.2e-07    0.0085      96     234 ..      92     228 ..      84     232 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.2e-07
   PF13203.1  96 DaiiNetLlkagvklPesavtleellk.............eealaewdaEklYralddkkkkrsdkqsdsstdggdgsgesegqgeqdskknrkdapekakvralakgesadlaespegksapeaeaeearewrerlaraleagraaGklpg 234
                   +iNet  k++v++P+++      +k             +  l++   E++ +++    ++   +q+ ++t+++dg g ++g+g+ + +++ + a   a+  +la+  + ++a++   +s+++ ++  + e+ ++    +e gr+ +   g
  MMETSP1325-20131115|9548_1  92 TGVINETVEKLTVPPPAAVP-----FKpppppkedtgpqaNPVLENEVSERIVPDI----NPGEPPQAPQETHEADGAGTPAGDGGTRTAEEADGA---AQRHSLAEFDQVQMATY--NASRSDSANLAE-EIAKVSIDEAESGRKGDSFLG 228
                 56788888888887777666.....4445566788888888889999999999999....777789999*******************99999888...66667777777788887..555555555545.777877778999999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1139.49
//
Query:       MMETSP1325-20131115|9549_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       579  (0.0423493); expected 273.4 (0.02)
Passed bias filter:                      443  (0.032402); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|9550_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-10   37.9   8.5    7.5e-10   37.9   5.9    1.0  1  PF04547.7 Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   5.9   5.5e-14   7.5e-10       2      38 ..       1      37 [.       1      53 [. 0.84

  Alignments for each domain:
  == domain 1    score: 37.9 bits;  conditional E-value: 5.5e-14
   PF04547.7  2 rdyFGekialYFawlgfytksllypavlGlilfllgl 38
                r+yFGe +a+YFawlgfy   ll+pa++G  ++ll +
  MMETSP1325-20131115|9550_1  1 REYFGESVAMYFAWLGFYGYYLLIPAIVGTGMQLLYY 37
                79***************************97776644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 264.09
//
Query:       MMETSP1325-20131115|9552_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-18   64.7   0.4    7.4e-13   48.5   0.0    2.0  2  PF12796.2  Ankyrin repeats (3 copies)
    1.4e-11   43.4   1.0    1.5e-05   24.4   0.1    3.0  3  PF00023.25 Ankyrin repeat
    3.7e-09   36.3   1.1    0.00085   19.3   0.0    2.8  3  PF13857.1  Ankyrin repeats (many copies)
    1.4e-08   34.9   0.0    4.6e-05   23.7   0.0    3.0  3  PF13637.1  Ankyrin repeats (many copies)
    1.7e-08   33.7   0.1      0.013   15.5   0.0    3.2  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   8.6e-08   0.00024      49      86 ..       2      39 ..       1      42 [. 0.94
   2 !   48.5   0.0   2.7e-16   7.4e-13       3      83 ..      18     112 ..      16     114 .. 0.94

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 8.6e-08
   PF12796.2 49 gadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86
                ga+v++ d++g  p   A+++gh+e+v+lL e ga+v+
  MMETSP1325-20131115|9552_1  2 GANVETPDNNGVAPVCTAAKFGHAEVVRLLAELGANVE 39
                89999999***************************986 PP

  == domain 2    score: 48.5 bits;  conditional E-value: 2.7e-16
   PF12796.2   3 lAaengnlelvklLlekgadvdl..........getpLhlAaeagnleivklLleagadvnakd....kegntpLhlAvrnghlelvklLlekga 83 
                  Aa+ g++e+v+lL e ga+v++          + tp+ lAa +g+ ++v++L e gad+n++      +   pL+ A  ++++e+++ Ll  ga
  MMETSP1325-20131115|9552_1  18 TAAKFGHAEVVRLLAELGANVETptptlapgsgNITPVCLAAMMGHANVVRVLAELGADLNTQGslpwSNRGRPLFQARAKNRVEAAQTLLLLGA 112
                 69********************99999999988888**************************99999999999*****************97776 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.5e-06     0.007       5      29 ..      15      39 ..      11      42 .. 0.85
   2 !   24.4   0.1   5.6e-09   1.5e-05       3      31 ..      52      80 ..      51      82 .. 0.94
   3 ?   -1.0   0.0      0.59   1.6e+03       5      26 ..      91     112 ..      91     113 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 2.5e-06
                HHHHHHHTTHHHHHHHHHHTTSSTT CS
  PF00023.25  5 PLHlAalrgnlevvklLlsqGAdln 29
                P   Aa+ g++evv+lL + GA++ 
  MMETSP1325-20131115|9552_1 15 PVCTAAKFGHAEVVRLLAELGANVE 39
                5567*******************95 PP

  == domain 2    score: 24.4 bits;  conditional E-value: 5.6e-09
                CBHHHHHHHTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25  3 fTPLHlAalrgnlevvklLlsqGAdlnaq 31
                 TP  lAa++g+++vv+ L + GAdln q
  MMETSP1325-20131115|9552_1 52 ITPVCLAAMMGHANVVRVLAELGADLNTQ 80
                6999***********************87 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.59
                 HHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25   5 PLHlAalrgnlevvklLlsqGA 26 
                 PL  A  ++++e ++ Ll  GA
  MMETSP1325-20131115|9552_1  91 PLFQARAKNRVEAAQTLLLLGA 112
                 6666777889999999998887 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.1e-07   0.00085       7      42 ..       3      38 ..       1      45 [. 0.90
   2 !   14.8   0.1     8e-06     0.022      16      47 ..      50      82 ..      42      87 .. 0.88
   3 ?   -0.7   0.0      0.62   1.7e+03      22      36 ..      94     108 ..      81     126 .. 0.75

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 3.1e-07
   PF13857.1  7 advnatdeggntpLhlAakggalevvrlLlapgadl 42
                a+v + d++g+ p  +Aak g++evvrlL + ga+ 
  MMETSP1325-20131115|9552_1  3 ANVETPDNNGVAPVCTAAKFGHAEVVRLLAELGANV 38
                789999************************888876 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 8e-06
   PF13857.1 16 gn.tpLhlAakggalevvrlLlapgadlnlrds 47
                gn tp  lAa+ g+++vvr L + gadln++ s
  MMETSP1325-20131115|9552_1 50 GNiTPVCLAAMMGHANVVRVLAELGADLNTQGS 82
                5559*************************9865 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 0.62
   PF13857.1  22 lAakggalevvrlLl 36 
                 +A  ++++e+++ Ll
  MMETSP1325-20131115|9552_1  94 QARAKNRVEAAQTLL 108
                 555689999999999 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   1.7e-08   4.6e-05       4      53 ..      15      70 ..      12      71 .. 0.85
   2 !   12.4   0.0   5.5e-05      0.15       3      30 ..      53      80 ..      51      84 .. 0.90
   3 !    7.0   0.0    0.0027       7.5       3      24 ..      90     111 ..      88     114 .. 0.89

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 1.7e-08
   PF13637.1  4 aLhyaaisgrlelvklLlekgid.....inrtdesGn.taLhiAalrgnieilklL 53
                ++  aa++g+ e+v+lL e g++     +   ++sGn t++ +Aa++g+ ++++ L
  MMETSP1325-20131115|9552_1 15 PVCTAAKFGHAEVVRLLAELGANvetptPTLAPGSGNiTPVCLAAMMGHANVVRVL 70
                56679******************7785444448999989************99987 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 5.5e-05
   PF13637.1  3 taLhyaaisgrlelvklLlekgidinrt 30
                t++  aa++g+  +v+ L e g+d+n +
  MMETSP1325-20131115|9552_1 53 TPVCLAAMMGHANVVRVLAELGADLNTQ 80
                67788*********************98 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.0027
   PF13637.1   3 taLhyaaisgrlelvklLlekg 24 
                 ++L++a +++r+e+++ Ll  g
  MMETSP1325-20131115|9552_1  90 RPLFQARAKNRVEAAQTLLLLG 111
                 68***************99766 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   2.5e-05     0.069       7      29 ..      17      39 ..      11      40 .. 0.87
   2 !   15.5   0.0   4.8e-06     0.013       4      30 .]      53      79 ..      49      79 .. 0.92
   3 ?    1.3   0.0      0.19   5.2e+02       5      26 ..      91     112 ..      87     114 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.5e-05
   PF13606.1  7 hlAasngrielveaLlengadin 29
                 +Aa++g+ e+v++L e ga++ 
  MMETSP1325-20131115|9552_1 17 CTAAKFGHAEVVRLLAELGANVE 39
                58******************985 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 4.8e-06
   PF13606.1  4 TpLhlAasngrielveaLlengadina 30
                Tp  lAa  g+ ++v+ L e gad+n+
  MMETSP1325-20131115|9552_1 53 TPVCLAAMMGHANVVRVLAELGADLNT 79
                9999*********************96 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.19
   PF13606.1   5 pLhlAasngrielveaLlenga 26 
                 pL+ A  ++r+e+++ Ll  ga
  MMETSP1325-20131115|9552_1  91 PLFQARAKNRVEAAQTLLLLGA 112
                 7888888999*****9998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 894.97
//
Query:       MMETSP1325-20131115|9553_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 507.46
//
Query:       MMETSP1325-20131115|9551_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-26   91.2  11.0    3.8e-26   91.2   7.6    1.5  2  PF01699.19 Sodium/calcium exchanger protein
  ------ inclusion threshold ------
        4.3    6.5   8.6        1.2    8.3   0.8    2.1  2  PF13567.1  Domain of unknown function (DUF4131)
        5.3    7.3   7.5       0.22   11.8   0.3    2.3  2  PF10183.4  ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)
        9.3    4.4   9.4        4.2    5.5   0.7    2.1  2  PF08016.7  Polycystin cation channel


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.75   2.6e+03      72      82 ..      10      20 ..       4      46 .. 0.51
   2 !   91.2   7.6   1.1e-29   3.8e-26       1     138 [.      47     184 ..      47     185 .. 0.97

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.75
  PF01699.19 72 viglcvlispl 82
                ++ ++++i+ l
  MMETSP1325-20131115|9551_1 10 ILSVPFFIAFL 20
                23333333332 PP

  == domain 2    score: 91.2 bits;  conditional E-value: 1.1e-29
  PF01699.19   1 llislladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkgagdlalgsivGSalfnlllviglcvlisplgekriqkvlvfkvtldfsflllvllllllivllsdgrltvweglvllllyilylvl 138
                 l+i +l +++ve++ ++a +l+l + v++l++lA+gts+p+ i s++aa++g++++a++++vGS++f++ll++gl++++s+l ++++ +v+++ ++  +++l+ +++l+lli+++ +++++   g ++++ly++++++
  MMETSP1325-20131115|9551_1  47 LWIGVLCHYMVEWAHEVAIILHLDPIVVALVVLATGTSIPDAIGSMVAAKNGEANMAISNAVGSNVFDILLGLGLPWVLSGLIKGEDMTVKRDGIIEYVGILFGTVILFLLILIAFRWKMNSTVGGAMFALYVAFVIY 184
                 79*********************************************************************************999999999999999999999999999999999********************97 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.8     0.024        81      14      66 ..       6      64 ..       2      87 .. 0.55
   2 ?    8.3   0.8   0.00036       1.2      17      58 ..     145     186 ..     138     193 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.024
   PF13567.1 14 lgllllalllalllllllflkr......rkrrrlllllglllllaglylllrapqpssn 66
                + l++l + +++++l +    +       k+     +++++l++++l++++  + ++  
  MMETSP1325-20131115|9551_1  6 WLLYILSVPFFIAFLTIPDCDHpyftnmFKQIYYVSFVMCILWIGVLCHYMVEWAHEVA 64
                44555555555555555543335555442333336666666666666666655555554 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00036
   PF13567.1  17 lllalllalllllllflkrrkrrrlllllglllllaglylll 58 
                 + ++++ ++l+ll+l+ +r+k  ++  +++++l +a++ ++l
  MMETSP1325-20131115|9551_1 145 VGILFGTVILFLLILIAFRWKMNSTVGGAMFALYVAFVIYCL 186
                 556666666666666666688999988888888888887766 PP

>> PF10183.4  ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   6.5e-05      0.22      57      94 ..      32      64 ..      11      67 .. 0.89
   2 ?   -1.2   0.7      0.71   2.4e+03      64      78 ..     144     158 ..     130     169 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.5e-05
   PF10183.4 57 egwelafflgftlllvvltvglaykPDtsiqeWArrEA 94
                  +++++++ f++++++ +v  +y       eWA++ A
  MMETSP1325-20131115|9551_1 32 NMFKQIYYVSFVMCILWIGVLCHYM-----VEWAHEVA 64
                6689********************7.....89999855 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.71
   PF10183.4  64 flgftlllvvltvgl 78 
                 ++g+ +++v+l + +
  MMETSP1325-20131115|9551_1 144 YVGILFGTVILFLLI 158
                 556655555554443 PP

>> PF08016.7  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.7    0.0012       4.2     202     257 ..      28      78 ..      27      92 .. 0.78
   2 ?    3.5   1.3     0.005        17     365     412 ..     144     187 ..     134     189 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0012
   PF08016.7 202 rfvtklslelllieiiflvfvlyfvveevlkirkegasylrsvwnlldlaivvlsv 257
                  ++t++ ++++ ++++++++++ ++ + ++++ +e a  l+     ld ++v+l v
  MMETSP1325-20131115|9551_1  28 PYFTNMFKQIYYVSFVMCILWIGVLCHYMVEWAHEVAIILH-----LDPIVVALVV 78 
                 6899999**************************99554444.....4444444444 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.005
   PF08016.7 365 fsnlvksiltlfrlllgafsytelesgnrvLGpllfltlvflvifill 412
                 +  +  +++ lf l+l af ++     n + G  +f ++v++vi+ l+
  MMETSP1325-20131115|9551_1 144 YVGILFGTVILFLLILIAFRWK----MNSTVGGAMFALYVAFVIYCLV 187
                 5566667899999*********....799***************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       845  (0.0618051); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.55
# Mc/sec: 845.26
//
Query:       MMETSP1325-20131115|9554_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-11   42.2   8.7      6e-11   41.7   6.0    1.2  1  PF05739.14 SNARE domain
     0.0011   17.7   2.7     0.0013   17.5   1.8    1.0  1  PF04108.7  Autophagy protein Apg17
     0.0091   15.7   3.0       0.01   15.5   2.1    1.2  1  PF06009.7  Laminin Domain II
     0.0094   15.3   4.8      0.021   14.2   3.3    1.6  1  PF00015.16 Methyl-accepting chemotaxis protein (MCP) signalling domain
  ------ inclusion threshold ------
       0.02   14.1   0.4       0.02   14.0   0.3    1.1  1  PF03238.8  ESAG protein
       0.03   13.7   1.6      0.042   13.3   0.8    1.6  1  PF08651.5  DASH complex subunit Duo1
      0.034   13.0   3.7       0.04   12.8   2.6    1.0  1  PF11727.3  Invariant surface glycoprotein
      0.044   13.6   2.2      0.057   13.3   1.6    1.1  1  PF10205.4  Predicted coiled-coil domain-containing protein
      0.055   13.3   1.0      0.077   12.9   0.5    1.4  1  PF08451.6  Adenosine/AMP deaminase N-terminal
      0.056   13.4   4.7       0.71    9.9   1.4    2.0  2  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
       0.14   11.7   3.9       0.24   11.0   2.7    1.4  1  PF10960.3  Protein of unknown function (DUF2762)
       0.14   11.9   3.3       0.16   11.6   2.3    1.3  1  PF02561.9  Flagellar protein FliS
       0.18   11.4   2.3       0.21   11.3   1.6    1.2  1  PF03564.10 Protein of unknown function (DUF1759)
       0.21   11.7   1.9       0.25   11.5   1.3    1.3  1  PF05531.7  Nucleopolyhedrovirus P10 protein
       0.21    9.2   3.3       0.23    9.1   2.3    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
       0.24   10.9   2.4       0.34   10.4   1.7    1.3  1  PF00957.16 Synaptobrevin
       0.24   11.1   4.9       0.58    9.9   0.3    2.3  2  PF10779.4  Haemolysin XhlA
       0.26   10.6   4.5        0.3   10.4   3.2    1.1  1  PF06810.6  Phage minor structural protein GP20
       0.52   10.5   3.2       0.52   10.5   0.9    1.8  2  PF02895.9  Signal transducing histidine kinase, homodimeric domain
       0.55    8.7   5.7       0.57    8.6   4.0    1.0  1  PF08317.6  Spc7 kinetochore protein
       0.66   10.0   5.6       0.75    9.8   3.9    1.2  1  PF00804.20 Syntaxin
       0.91    9.3   7.8          1    9.2   5.4    1.1  1  PF10146.4  Zinc finger-containing protein
        1.3    9.0   4.3        9.1    6.3   0.3    2.0  2  PF09487.5  Bacterial type III secretion protein (HrpB2)
        1.4    8.6   4.6        2.1    8.0   3.2    1.4  1  PF07889.7  Protein of unknown function (DUF1664)
        2.2    7.9   6.5        1.4    8.5   1.4    2.3  2  PF07544.8  RNA polymerase II transcription mediator complex subunit 9
        2.6    8.1   7.1        6.1    7.0   4.9    1.7  1  PF01519.11 Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   6.0   1.1e-13     6e-11       1      62 [.      19      80 ..      19      81 .. 0.98

  Alignments for each domain:
  == domain 1    score: 41.7 bits;  conditional E-value: 1.1e-13
                HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PF05739.14  1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalryq 62
                er++e++e++++++ ++++f+d++e v +Q e ++  ++ +e+++ + +++ +++ ka ++q
  MMETSP1325-20131115|9554_1 19 EREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHARSGLDQVEKANEHQ 80
                8***********************************************************99 PP

>> PF04108.7  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   1.8   2.4e-06    0.0013     267     341 ..       7      80 ..       2      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 2.4e-06
   PF04108.7 267 iesnlkrvkkllssklskieelisatkelleelekvkerlpkylaifadieelleeekesieeyiselseLnefY 341
                 ++++  + + ++++ +++i+e+++ ++++ e +++++e ++ +   ++++e+ +e+ +++  ++++++++ ne+ 
  MMETSP1325-20131115|9554_1   7 MQEQAIN-EAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHARSGLDQVEKANEHQ 80 
                 3333333.47899********************************************************999995 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   2.1   1.9e-05      0.01       5      80 ..      24      78 ..       3      86 .] 0.44

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.9e-05
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7  5 akeAnetakeVlkelegistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkLkklkk 80
                ++e+++ +++V +  +++++ v+  +++++++++ +e+ ++                      a  +ld+ +k ++
  MMETSP1325-20131115|9554_1 24 IREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHA---------------------HARSGLDQVEKANE 78
                33444444444444444444444444444444444444444.....................44444444333333 PP

>> PF00015.16  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   3.3   4.1e-05     0.021     126     189 ..      13      76 ..       2      84 .. 0.75

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4.1e-05
                 --HHHHH---CCCCHHHHCCCHHHH---HHHHHHHHH--------HHHHHHHHHHHHHHHHHHH CS
  PF00015.16 126 gselveetgealkeIveavaeiadlvqeiaaaseeqsasieevnqaveeidevtkenaalveea 189
                    +v+e +++++eI ++v++++++ +++a  +++q + i+ v + +e+ +  +   + +ve a
  MMETSP1325-20131115|9554_1  13 NEAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHARSGLDQVEKA 76 
                 4567899999999999999999999999999999999999999887777665555555555444 PP

>> PF03238.8  ESAG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.3   3.9e-05      0.02      40      89 ..      24      74 ..       9      86 .] 0.63

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 3.9e-05
   PF03238.8 40 vrkeipgalikvnkyytaiaeitrtvWddvkaveas..gkakCeeqkvegvk 89
                + +ei + ++kvn  +  +aei+    +d+++vea   +++   ++ +++v+
  MMETSP1325-20131115|9554_1 24 I-REIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMieKSHAHARSGLDQVE 74
                3.3688999************************9852122222233333333 PP

>> PF08651.5  DASH complex subunit Duo1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.8     8e-05     0.042       8      42 ..      29      63 ..      22      68 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8e-05
   PF08651.5  8 eqLrkinevienlieslkaakgniekvqetvkstn 42
                ++++k+ne+++ l e +++ +++i++v++ +++++
  MMETSP1325-20131115|9554_1 29 QNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSH 63
                789***************************99987 PP

>> PF11727.3  Invariant surface glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.6   7.7e-05      0.04      57     125 ..      13      79 ..       5      83 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 7.7e-05
   PF11727.3  57 adelvketekfaaeikealervkaylekveslsdsklsdsdkkkikellekakdkikealkeakkagre 125
                  + +v+e e+ + ei +++ +v++  +++ ++   +++  d + +++++ek+ ++++++l +++ka+++
  MMETSP1325-20131115|9554_1  13 NEAIVREREDEIREIHQNVTKVNEIFKDLAEI--VNDQQEDINTVEAMIEKSHAHARSGLDQVEKANEH 79 
                 46789999999999999999999999999955..5667789999*******************999987 PP

>> PF10205.4  Predicted coiled-coil domain-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.6   0.00011     0.057      26      89 ..       7      71 ..       3      83 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.00011
   PF10205.4 26 sksasLkee.LkqkeaslRkteqevdsLgFRnkqLerrvellqeelelsekkakkskssgdsnsq 89
                 ++++++e  ++++e  +R ++q+v  +    k L+  v+  qe+++  e+  +ks+ +  s   
  MMETSP1325-20131115|9554_1  7 MQEQAINEAiVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHARSGLD 71
                4556666652599******************************************9955544333 PP

>> PF08451.6  Adenosine/AMP deaminase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.5   0.00015     0.077      43      88 ..       3      45 ..       1      49 [. 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.00015
   PF08451.6 43 ieLtekEekaneilmalKkeelkeglkdpskfapaqhfFkvkdlie 88
                ++ + +E+++ne +++ +++e++e  ++ +     + +Fk + +i 
  MMETSP1325-20131115|9554_1  3 LRVQMQEQAINEAIVREREDEIREIHQNVT---KVNEIFKDLAEIV 45
                667889******************965555...6678999998885 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4    0.0014      0.71      46      90 ..       2      46 ..       1      51 [. 0.90
   2 ?    4.8   0.0     0.051        27       3      34 ..      50      81 ..      48      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0014
   PF10046.4 46 slekeleklkqkyeelkpylqqideieeqvtkLeeavkeLDeysk 90
                 l++++++ +  +  +++  ++i ei ++vtk  e+ k L e++ 
  MMETSP1325-20131115|9554_1  2 RLRVQMQEQAINEAIVREREDEIREIHQNVTKVNEIFKDLAEIVN 46
                68999999999999************************9999886 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.051
   PF10046.4  3 kafkkiskyveaeleisaedlklLeklNeata 34
                + +++++ ++e+  + + + l+ +ek Ne + 
  MMETSP1325-20131115|9554_1 50 EDINTVEAMIEKSHAHARSGLDQVEKANEHQQ 81
                67899999********************9875 PP

>> PF10960.3  Protein of unknown function (DUF2762)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.7   0.00045      0.24      27      69 ..       7      49 ..       2      51 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00045
   PF10960.3 27 lkenekreekqeeREskyqqiIeeitdkleiveelkkdvseik 69
                ++e+   e   +eRE+   +i +++t++ ei+++l + v++++
  MMETSP1325-20131115|9554_1  7 MQEQAINEAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQ 49
                445554555566***************************9986 PP

>> PF02561.9  Flagellar protein FliS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.3   0.00031      0.16      32      71 ..      11      50 ..       3      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00031
                HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHCCC.. CS
   PF02561.9 32 alkraaeaienediekknekiskaqeIiteLkvsLdeekg 71
                a++ a+  + +++i++ +++++k+ eI+++L  + + ++ 
  MMETSP1325-20131115|9554_1 11 AINEAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQE 50
                5566677888999*********************998754 PP

>> PF03564.10  Protein of unknown function (DUF1759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.6   0.00039      0.21      87     136 ..      19      69 ..       4      81 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00039
  PF03564.10  87 tkndsvsqlkelvdelneiirqLeklgeead.dtilvslllkKldeeirrk 136
                  ++d+++++++ v+++nei++ L ++ ++++ d   v+++++K  ++ r  
  MMETSP1325-20131115|9554_1  19 EREDEIREIHQNVTKVNEIFKDLAEIVNDQQeDINTVEAMIEKSHAHARSG 69 
                 35799******************9997777658899999999988877766 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.3   0.00047      0.25      14      59 ..      18      60 ..       4      78 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00047
   PF05531.7 14 kavddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkve 59
                ++ +d +  + q+v++v+e ++d   l e +++q++ ++++e+ +e
  MMETSP1325-20131115|9554_1 18 REREDEIREIHQNVTKVNEIFKD---LAEIVNDQQEDINTVEAMIE 60
                34445555555555555555555...33334444444444444443 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.3   0.00044      0.23      59     128 ..       7      76 ..       2      85 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00044
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..... CS
  PF01496.14  59 ekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrnvlreekefleenkveelrelssl 128
                 +++++ ++  v ++e e+ e+ +++ +v+e+ + L + +n+++e  n ++   e+  +++++ l ++++ 
  MMETSP1325-20131115|9554_1   7 MQEQAINEAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHARSGLDQVEKA 76 
                 567777888999**********************************999999998888653333333332 PP

>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.7   0.00064      0.34       2      48 ..      21      67 ..      20      79 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00064
  PF00957.16  2 ndklskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaq 48
                +d++++i+++v +v +i k+  + v +++e++++++ + e+  ++a+
  MMETSP1325-20131115|9554_1 21 EDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHAR 67
                799*******************************9999888888876 PP

>> PF10779.4  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.3      0.13        67      32      51 ..      13      32 ..       2      44 .. 0.62
   2 ?    9.9   0.3    0.0011      0.58       1      35 [.      45      80 ..      45      83 .. 0.94

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.13
   PF10779.4 32 lekqiknlnkdLskIkknlk 51
                +e  + + ++++ +I++n++
  MMETSP1325-20131115|9554_1 13 NEAIVREREDEIREIHQNVT 32
                33335555666666666654 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0011
   PF10779.4  1 vqdikerlnrietklke.eekaenalEkadaalekq 35
                v+d++e++n++e  +++ ++ a + l++ ++a+e q
  MMETSP1325-20131115|9554_1 45 VNDQQEDINTVEAMIEKsHAHARSGLDQVEKANEHQ 80
                589**************9***************987 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.2   0.00057       0.3       5      70 ..      14      80 ..       8      83 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00057
   PF06810.6  5 kkimaekgkdiqeeKskldkaeeeldslkeqlkerdkqiedLkk.kvkdneeLkkkieklkeknkkk 70
                ++i+ e++++i+e  ++++k++e +++l e +++  ++i+  ++  +k +      +++++++n+++
  MMETSP1325-20131115|9554_1 14 EAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAmIEKSHAHARSGLDQVEKANEHQ 80
                579999***********************************99966788888899999999999855 PP

>> PF02895.9  Signal transducing histidine kinase, homodimeric domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.9     0.001      0.52      19      65 ..       8      52 ..       1      55 [. 0.89
   2 ?    0.1   0.0       1.8   9.3e+02      40      66 ..      59      85 ..      52      86 .] 0.66

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.001
   PF02895.9 19 GELvitkarleqlldelreeglkasdeelkealqqlerisreLqeav 65
                 E  i++a ++++ de+r  ++ + +++++e +  l+ i+++ qe +
  MMETSP1325-20131115|9554_1  8 QEQAINEAIVREREDEIR--EIHQNVTKVNEIFKDLAEIVNDQQEDI 52
                577899999999999999..999*********************976 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 1.8
   PF02895.9 40 lkasdeelkealqqlerisreLqeavm 66
                +++s    ++ l+q+e+  +  q +v+
  MMETSP1325-20131115|9554_1 59 IEKSHAHARSGLDQVEKANEHQQGCVL 85
                455666677777787777776666665 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   4.0    0.0011      0.57     221     283 ..      13      75 ..       1      83 [. 0.78

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0011
   PF08317.6 221 leekieekrkkleeleeelqelkkkiealkekkselleeiaeaekileecrgfsakeisklke 283
                 +e  + e+++++ e ++++ ++++  ++l+e +++ +e+i+  e ++e+++ + ++ + ++++
  MMETSP1325-20131115|9554_1  13 NEAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHARSGLDQVEK 75 
                 455577888899999999999999999999999999999999999999999998888777665 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.9    0.0014      0.75       9      78 ..      17      83 ..       7      86 .] 0.92

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0014
  PF00804.20  9 veeIrgeiekisekveelkrlhsrilaspdpdkqtkeeleeltaeikklankirskLksleqsieqeegq 78
                v e ++ei +i ++v ++ +  +++    +   + +e++++  a i k     rs L+++e+ +e ++g+
  MMETSP1325-20131115|9554_1 17 VREREDEIREIHQNVTKVNEIFKDLAEIVN---DQQEDINTVEAMIEKSHAHARSGLDQVEKANEHQQGC 83
                6677899*****************999999...69****************************9988876 PP

>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.4     0.002         1      24      88 ..      14      78 ..       1      83 [. 0.71

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.002
   PF10146.4 24 vealeaeEkllkeykkeleeLlkEkmsHvEelrqihaDindlEniikqseeekekrlekinrlye 88
                +  + + E  ++e++++++++++  ++ +E++   + Din++E +i +s++  +  l++++++ e
  MMETSP1325-20131115|9554_1 14 EAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHAHARSGLDQVEKANE 78
                33456677778888888888888888888888888888888888888888888777777777665 PP

>> PF09487.5  Bacterial type III secretion protein (HrpB2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2     0.044        23      44      70 ..      12      38 ..       2      45 .. 0.74
   2 ?    6.3   0.3     0.017       9.1      37      71 ..      47      81 ..      38      86 .] 0.84

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.044
   PF09487.5 44 lvsklvekqdealrkvlddvaaleena 70
                +   +v + ++++r++ ++v  ++e  
  MMETSP1325-20131115|9554_1 12 INEAIVREREDEIREIHQNVTKVNEIF 38
                3345789999**********9998765 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.017
   PF09487.5 37 qaseepslvsklvekqdealrkvlddvaaleenak 71
                 ++e  ++v  ++ek+ ++ r  ld+v+  +e+++
  MMETSP1325-20131115|9554_1 47 DQQEDINTVEAMIEKSHAHARSGLDQVEKANEHQQ 81
                45677899*******************99999986 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   3.2    0.0039       2.1      81     123 ..      14      56 ..       2      81 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0039
   PF07889.7  81 keiskeikeevteiredlsaikedvkslkqvvegLesklesle 123
                 ++i++e ++e+ ei++++++++e +k l ++v+  ++ ++++e
  MMETSP1325-20131115|9554_1  14 EAIVREREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVE 56 
                 3555666666666666666666666666666666555555554 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.4    0.0027       1.4      54      80 ..      17      43 ..       1      46 [. 0.79
   2 ?    4.1   0.1     0.063        33      49      70 ..      40      61 ..      38      81 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0027
   PF07544.8 54 veeqeaeIeeleeqiarkrevLkklke 80
                v e+e+eI+e  +++++ +e+ k+l e
  MMETSP1325-20131115|9554_1 17 VREREDEIREIHQNVTKVNEIFKDLAE 43
                679*******************99976 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.063
   PF07544.8 49 disrsveeqeaeIeeleeqiar 70
                d+++ v +q++ I+  e  i++
  MMETSP1325-20131115|9554_1 40 DLAEIVNDQQEDINTVEAMIEK 61
                78888999*******9999987 PP

>> PF01519.11  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.9     0.012       6.1      43     101 ..       9      74 ..       1      80 [. 0.56

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.012
  PF01519.11  43 Etkvdql...aqgeqikkltetvekqgeqikelqveqkaqgetlqlilktlekin....krldkle 101
                 E+ ++++    ++ +i++  + v+k +e  k l + +++q+e +++++   ek +    + ld++e
  MMETSP1325-20131115|9554_1   9 EQAINEAivrEREDEIREIHQNVTKVNEIFKDLAEIVNDQQEDINTVEAMIEKSHaharSGLDQVE 74 
                 333333344445555666666666666666666666667777777666666665544444455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1682  (0.123025); expected 273.4 (0.02)
Passed bias filter:                     1093  (0.0799444); expected 273.4 (0.02)
Passed Vit filter:                       186  (0.0136044); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.54u 0.45s 00:00:00.99 Elapsed: 00:00:00.62
# Mc/sec: 332.40
//
Query:       MMETSP1325-20131115|9557_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-23   81.6   0.1    3.2e-23   81.2   0.0    1.1  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.2   0.0   2.3e-27   3.2e-23       2      87 ..      23     108 ..      22     111 .. 0.97

  Alignments for each domain:
  == domain 1    score: 81.2 bits;  conditional E-value: 2.3e-27
                 EEE----EEE-TT-B--EEEEEEE-EEEEEEE-----EEEEEEE-TTEECSGGGCCSSSB-SSEEEEEEEEEEEEEEHHHHHHHHC CS
  PF00027.24   2 rsfkkgevifkeGdpadslyiilsGkvkvykndedgkesilaelgpGdffGelalltgeprsatvvaltdvevlvipredfrelle 87 
                 +sf+ g v++++G+p+d +yi+++G++  +++d +g++  +a+l++G++fGe+allt+++r+atv a+++  vl+++r++f++++ 
  MMETSP1325-20131115|9557_1  23 ESFDDGKVVCRQGEPGDTFYIVKEGTAVCTQTDAKGQQLEVARLSAGQYFGEIALLTSKTRQATVAAEGELAVLSLDRKTFKRVMG 108
                 789********************************************************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       424  (0.0310123); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 542.33
//
Query:       MMETSP1325-20131115|9558_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.57
# Mc/sec: 590.83
//
Query:       MMETSP1325-20131115|9556_1  [L=417]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-10   39.2  35.3    0.00018   20.9   6.0    4.7  4  PF07699.8  GCC2 and GCC3
  ------ inclusion threshold ------
      0.025   14.1  33.9      0.032   13.8   2.7    4.9  4  PF07562.9  Nine Cysteines Domain of family 3 GPCR
       0.34    9.3  36.3      0.012   14.1  10.8    2.7  2  PF03302.8  Giardia variant-specific surface protein


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   2.5   1.7e-06    0.0077       6      43 ..     197     232 ..     193     233 .. 0.80
   2 !   20.9   6.0   3.9e-08   0.00018       2      48 .]     224     270 ..     223     270 .. 0.85
   3 !   12.9   1.8   1.2e-05     0.054       8      43 ..     264     295 ..     260     299 .. 0.78
   4 !    9.5   1.0   0.00014      0.64      11      41 ..     342     371 ..     334     372 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.7e-06
   PF07699.8   6 kgnkkCepCprGtYkneegqkkCiaCppgttTskkgsk 43 
                 + n +C  Cp Gt+++++    C +Cp+g + ++++++
  MMETSP1325-20131115|9556_1 197 SANGECDDCPAGTFSSRS--EPCRKCPAGYVSQHTAAS 232
                 56779*********8765..57*******887777765 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 3.9e-08
   PF07699.8   2 tylkkgn.kkCepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48 
                 + +++   +kC +C+ G ++n++g+k C++C     Ts  g+ + + C
  MMETSP1325-20131115|9556_1 224 YVSQHTAaSKCDECEAGKFSNQTGSKMCEKCDTM-KTSLDGAEYCNLC 270
                 555544349***********************99.5999999998888 PP

  == domain 3    score: 12.9 bits;  conditional E-value: 1.2e-05
   PF07699.8   8 nkkCepCprGtYkneegqkkCiaCppgttTskkgsk 43 
                  + C++C +G Y n +   kC+aCp g  T  +g +
  MMETSP1325-20131115|9556_1 264 AEYCNLCVTGRYMNAG---KCLACPEG-ATCDEGTT 295
                 467*********9975...8*******.56666655 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.00014
   PF07699.8  11 CepCprGtYkneegqkkCiaCppgttTskkg 41 
                 C+ C+++++ ++    +C +C + ++T+ +g
  MMETSP1325-20131115|9556_1 342 CQSCQKHFFYETLTR-SCRSCADPHFTAAQG 371
                 *********877665.5**********9876 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.8   1.8e-05     0.084      27      54 .]     201     226 ..     200     226 .. 0.89
   2 ?   13.8   2.7   7.1e-06     0.032      27      52 ..     233     258 ..     229     260 .. 0.92
   3 ?    3.7   1.5    0.0098        45      28      51 ..     267     287 ..     266     296 .. 0.90
   4 ?    1.2   2.3     0.061   2.8e+02      28      50 ..     342     363 ..     329     367 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.8e-05
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeqws 54 
                 +C +Cp+g++s+   +  C+kCp +++s
  MMETSP1325-20131115|9556_1 201 ECDDCPAGTFSS--RSEPCRKCPAGYVS 226
                 7***********..6688*****99875 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 7.1e-06
   PF07562.9  27 dCvpCpegeisnetdettCkkCpeeq 52 
                 +C +C++g++sn+t++  C+kC++ +
  MMETSP1325-20131115|9556_1 233 KCDECEAGKFSNQTGSKMCEKCDTMK 258
                 6*********************9765 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.0098
   PF07562.9  28 CvpCpegeisnetdettCkkCpee 51 
                 C  C +g + n   + +C +Cpe+
  MMETSP1325-20131115|9556_1 267 CNLCVTGRYMN---AGKCLACPEG 287
                 999******99...779*****97 PP

  == domain 4    score: 1.2 bits;  conditional E-value: 0.061
   PF07562.9  28 CvpCpegeisnetdettCkkCpe 50 
                 C +C+++ + + t + +C++C +
  MMETSP1325-20131115|9556_1 342 CQSCQKHFFYE-TLTRSCRSCAD 363
                 99**9988877.7688*****86 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1  10.8   2.6e-06     0.012     259     338 ..     190     270 ..     177     271 .. 0.85
   2 ?   -3.2  11.2      0.46   2.1e+03     242     342 ..     267     365 ..     267     385 .. 0.54

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.6e-06
   PF03302.8 259 csegckectsstvcttcldGyvks.sdacakcdsscetctGaattcktcatGyyksatkevactssesd.kgvtGvkdclsc 338
                 c +g +e +++ +c  c  G   s s+ c kc ++  +   aa++c+ c +G +   t+   c+++++   ++ G + c  c
  MMETSP1325-20131115|9556_1 190 CPDG-HEPSANGECDDCPAGTFSSrSEPCRKCPAGYVSQHTAASKCDECEAGKFSNQTGSKMCEKCDTMkTSLDGAEYCNLC 270
                 4444.5678899*******9988779*****************************************995668899999888 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 0.46
   PF03302.8 242 cqkeadgykldsgdlvvcseg..ckectsstvcttcldGyvks.sdacakcdsscetctGaattcktcatGyyksatkevactssesdkgvtGvkdclscapps 342
                 c+  + g  +++g+   c eg  c+e t+ ++ +t ++G+ +  s a    ++  + c+G+  t + c  G+   +  + +c++    +++t  + c sca p 
  MMETSP1325-20131115|9556_1 267 CNLCVTGRYMNAGKCLACPEGatCDEGTTLATMRT-TKGFYRFdSMAKKIYECQSRGCKGSDITTDQCNEGH--KGPLCQSCQKHFFYETLT--RSCRSCADPH 365
                 44556666777777777777633333333333333.334333313333334445556777777777777664..344455555544444443..5677777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       697  (0.0509801); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.86u 0.39s 00:00:01.25 Elapsed: 00:00:00.62
# Mc/sec: 1611.74
//
Query:       MMETSP1325-20131115|9560_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|9559_1  [L=326]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 1473.99
//
Query:       MMETSP1325-20131115|9555_1  [L=1304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-30  103.7   0.0    2.3e-17   62.9   0.0    3.1  2  PF00069.20 Protein kinase domain
    1.7e-24   85.8   6.8    1.3e-07   31.7   0.1    6.6  6  PF12796.2  Ankyrin repeats (3 copies)
    3.2e-24   84.7   8.1     0.0013   19.0   0.0   10.7 11  PF13637.1  Ankyrin repeats (many copies)
    3.3e-24   84.2   7.4    4.3e-06   26.6   0.3    8.1  7  PF13857.1  Ankyrin repeats (many copies)
      1e-17   62.3   4.7       0.36   11.0   0.1    7.7  7  PF13606.1  Ankyrin repeat
    4.7e-14   51.2  24.0    0.00028   20.4   0.2   10.8 10  PF00023.25 Ankyrin repeat
    0.00081   18.3   0.0      0.011   14.7   0.0    2.2  2  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0011   18.0   0.0       0.11   11.4   0.0    3.0  3  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.0   1.3e-20   2.3e-17      25     260 .]     453     755 ..     429     755 .. 0.80
   2 !   35.8   0.0   2.4e-12   4.2e-09      57     208 ..    1066    1245 ..    1037    1263 .. 0.82

  Alignments for each domain:
  == domain 1    score: 62.9 bits;  conditional E-value: 1.3e-20
                 EEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEE..................STEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHH.............................................TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH...............HHHHHHHHHHT-SSGGGS--.HHHHHTSGGH CS
  PF00069.20  25 kkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfee..................kdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvll.............................................kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks...............eelkdlikkllekdpakRlt.aeeilkhpwl 260
                 ++v++K + k+e +++++ +        k  s +++v +l + e+                  k ++ +v+ +++  +l+ ++  ++kl++ +i++i++++++++++lH  g iH D+Kp Ni    +++++++D+ +a    + +e +     +  ++ PE                                                +   + ++ D+Ws++v+ly  + +k++++++  ++ + + e+i+  + +    ++  ++                 ++dl+ +ll+kdp+kR++ +ee+l hp++
  MMETSP1325-20131115|9555_1 453 RNVVIKLMTKREVSDREKAQ-------RKGTSPKHVVPILYSSEDpemreiwarelkklgrwqKYTFGIVMPCAQR-NLM-VIFFQEKLTMSDIRQIFESLARSIAHLHAIGRIHGDIKPLNIVRAFDESIMLIDLDMAV---NLREPVGAKQLSTAFVGPEATYetvdadggaaaefrkadaypngvaklplvapaganygdgegyaadGLLLAHPTFDLWSYAVVLYYAIAHKPLLETAGADQLRGKAERIKLARWSTADLTYAMNDldhamlmqgyddqtrLVVCDLLAWLLQKDPKKRPQsCEEMLAHPFF 755
                 45777777777666655433.......3444555555555555555555555557778888744444488888877.777.66679*****************************************************6...5677777777888999999966778899999999999**********************9999988777778899*********************99666666666666665555555444444466788999999999999*****************879*******98 PP

  == domain 2    score: 35.8 bits;  conditional E-value: 2.4e-12
                  -TTB--EEEEEEE...............STEEE.EEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHH.................TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHH CS
  PF00069.20   57 Hpnivkllevfee...............kdely.lvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvll.................kakeytkkvDvWslGvilyelltgklpfsgeseedql 208 
                    +++k++ + ++                d+ + +v+  +e  +l+d+l  +++++    k+++ + +++l +lH++g+i  D Kp N+    +g+  ++D   a    + +        +  +m+PE +                  +  e+ ++ D+Ws+ v+ly ++ ++++++ +++++ +
  MMETSP1325-20131115|9555_1 1066 VAFVIKVIYTSTDeglaskwikelppeyADYPFgIVMPAAER-NLMDVLL-KERVDLALGKTMFASFARALGHLHDRGLIQGDFKPGNVVRMPDGTWILIDMDGAV---RIGDPIGAKGLSTAFMPPEACHvqgdevvfrvrregapyEVLEAHPTLDLWSFFVVLYRVVVHRPLLEADDRDNLR 1245
                  555666666665566666666666665534444589999988.9999999.99****************************************************6...5677778888899*******8888999999******999999*************************999555544 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   9.8e-06     0.017       3      67 ..     130     198 ..      92     202 .. 0.73
   2 !    9.0   0.0   0.00088       1.5      36      85 ..     318     365 ..     294     376 .. 0.81
   3 !   24.2   0.1   1.7e-08   2.8e-05       1      65 [.     774     851 ..     774     880 .. 0.80
   4 !    9.0   0.0   0.00088       1.5      38      66 ..     886     914 ..     869     920 .. 0.86
   5 !   31.7   0.1   7.4e-11   1.3e-07      13      84 ..     890     966 ..     884     972 .. 0.87
   6 ?   -2.3   0.0       3.1   5.3e+03      11      33 ..    1042    1067 ..    1037    1075 .. 0.60

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 9.8e-06
   PF12796.2   3 lAaengnlelvklLl.ekgadvdl.....getpLhlAaeagnleivklLleag.advnakdkegntpLhlAv 67 
                 lAa++++++++  Ll ++  ++++     g+tpLh+ +   +  ++k+L+++   dvn ++  g t+L+ Av
  MMETSP1325-20131115|9555_1 130 LAAQRDSANTFTALLlDAWSNPNVivdeqGNTPLHVFS---SPRVIKFLINHPlVDVNVTNTAGLTALMKAV 198
                 46666666666544326666666666777777777765...4678888888774588888888888888887 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00088
   PF12796.2  36 agnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlek.gadv 85 
                 +  l++v++L +a     a+d++gnt+Lh+A      e+v++Lle+ g+++
  MMETSP1325-20131115|9555_1 318 NKMLATVEALAAAPGAASATDHNGNTCLHIAK---TPEIVRVLLEAgGSNP 365
                 5567788888887777778889*******995...7999999999955665 PP

  == domain 3    score: 24.2 bits;  conditional E-value: 1.7e-08
   PF12796.2   1 LhlAaengnlelvklLle...kg.advdlget..........pLhlAaeagnleivklLleag.advnakdkegntpLhl 65 
                 Lh+A   gn + v+  l+   +g a+ d  e+          pLhlA++ g++++vk L++++  d na d  g+t+L +
  MMETSP1325-20131115|9555_1 774 LHVASALGNDSEVRSVLAqvdAGqASAD--EElgpgtllhchPLHLACAGGHVNVVKTLIARKdVDRNALDGAGRTALVV 851
                 7889999887777777642224445555..446667788888*******************7625999999******975 PP

  == domain 4    score: 9.0 bits;  conditional E-value: 0.00088
   PF12796.2  38 nleivklLleagadvnakdkegntpLhlA 66 
                 + + v+ L+ +g d+n kd+ gn pLh+ 
  MMETSP1325-20131115|9555_1 886 SAAEVQQLIGSGEDPNVKDAAGNAPLHHH 914
                 5566899999*****************85 PP

  == domain 5    score: 31.7 bits;  conditional E-value: 7.4e-11
   PF12796.2  13 vklLlekgadvdl....getpLhlAa...eagnleivklLle.agadvnakdkegntpLhlAvrnghlelvklLlekgad 84 
                 v++L+ +g d+++    g+ pLh+ a   +a ++e+v++Ll+ ++a++na++k g+tpLhlA    ++++v++Ll +g d
  MMETSP1325-20131115|9555_1 890 VQQLIGSGEDPNVkdaaGNAPLHHHApslAASSIEVVRALLDsHQAQPNAQNKVGKTPLHLAQ---STDMVRVLLAAGGD 966
                 899*********99999999***976565999*********9899****************96...68899999988755 PP

  == domain 6    score: -2.3 bits;  conditional E-value: 3.1
   PF12796.2   11 elvklLlekgadvdl...getpLhlA 33  
                  ++v +L++++a +d    +++ Lh+A
  MMETSP1325-20131115|9555_1 1042 DVVLKLMKHKAQFDNetgQRQGLHVA 1067
                  45556666666666333333355555 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.043        74      28      40 ..      89     102 ..      67     103 .. 0.80
   2 ?    1.6   0.0      0.22   3.8e+02      18      37 ..     110     129 ..     104     130 .. 0.82
   3 !    6.9   0.0    0.0049       8.4      19      40 ..     143     165 ..     131     168 .. 0.81
   4 !   14.5   0.0     2e-05     0.034      12      42 ..     167     198 ..     165     201 .. 0.92
   5 ?    4.9   0.1     0.021        37      29      41 ..     336     348 ..     321     358 .. 0.81
   6 ?    1.8   0.0       0.2   3.4e+02      15      37 ..     352     376 ..     349     376 .. 0.92
   7 ?   -1.7   0.0       2.4   4.1e+03       2      22 ..     771     791 ..     770     796 .. 0.84
   8 !   19.0   0.0   7.9e-07    0.0013       4      38 ..     814     849 ..     812     851 .. 0.91
   9 ?    5.9   0.0      0.01        17      17      40 ..     890     913 ..     885     915 .. 0.93
  10 !   17.8   0.0   1.9e-06    0.0032       7      54 .]     914     961 ..     913     961 .. 0.81
  11 ?    2.9   0.0     0.089   1.5e+02      13      38 ..     953     979 ..     951     980 .. 0.92

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.043
   PF13637.1  28 nrt.desGntaLhi 40 
                  ++ de+Gnt+Lh+
  MMETSP1325-20131115|9555_1  89 SMVvDEQGNTPLHV 102
                 5677*********7 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.22
   PF13637.1  18 klLlekgidinrtdesGnta 37 
                   Lle+g din++++ G  +
  MMETSP1325-20131115|9555_1 110 LTLLEHGGDINAVNKAGLVP 129
                 5699**********999755 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0049
   PF13637.1  19 lLlekgidinrt.desGntaLhi 40 
                 lLl+   ++n + de+Gnt+Lh+
  MMETSP1325-20131115|9555_1 143 LLLDAWSNPNVIvDEQGNTPLHV 165
                 555444569*************7 PP

  == domain 4    score: 14.5 bits;  conditional E-value: 2e-05
   PF13637.1  12 grlelvklLlek.gidinrtdesGntaLhiAa 42 
                 +  +++k+L+++  +d+n t+  G taL +A+
  MMETSP1325-20131115|9555_1 167 SSPRVIKFLINHpLVDVNVTNTAGLTALMKAV 198
                 56799*******77****************98 PP

  == domain 5    score: 4.9 bits;  conditional E-value: 0.021
   PF13637.1  29 rtdesGntaLhiA 41 
                 +td +Gnt+LhiA
  MMETSP1325-20131115|9555_1 336 ATDHNGNTCLHIA 348
                 6799********9 PP

  == domain 6    score: 1.8 bits;  conditional E-value: 0.2
   PF13637.1  15 elvklLlek.gidinrt.desGnta 37 
                 e+v+ Lle  g ++ r+ +++G ta
  MMETSP1325-20131115|9555_1 352 EIVRVLLEAgGSNPRRIkNADGKTA 376
                 79******978***********998 PP

  == domain 7    score: -1.7 bits;  conditional E-value: 2.4
   PF13637.1   2 ltaLhyaaisgrlelvklLle 22 
                 l+ Lh+a + g+   v++ l+
  MMETSP1325-20131115|9555_1 771 LSRLHVASALGNDSEVRSVLA 791
                 5679********999999885 PP

  == domain 8    score: 19.0 bits;  conditional E-value: 7.9e-07
   PF13637.1   4 aLhyaaisgrlelvklLlek.gidinrtdesGntaL 38 
                 +Lh a++ g++ +vk L+++ ++d n++d+ G+taL
  MMETSP1325-20131115|9555_1 814 PLHLACAGGHVNVVKTLIARkDVDRNALDGAGRTAL 849
                 7*****************8756888888*******9 PP

  == domain 9    score: 5.9 bits;  conditional E-value: 0.01
   PF13637.1  17 vklLlekgidinrtdesGntaLhi 40 
                 v+ L+ +g d+n +d+ Gn +Lh 
  MMETSP1325-20131115|9555_1 890 VQQLIGSGEDPNVKDAAGNAPLHH 913
                 78899******************5 PP

  == domain 10    score: 17.8 bits;  conditional E-value: 1.9e-06
   PF13637.1   7 yaai..sgrlelvklLlek.gidinrtdesGntaLhiAalrgnieilklLl 54 
                 +a +  ++ +e+v+ Ll++  +++n++++ G t+Lh+A   +  ++++ Ll
  MMETSP1325-20131115|9555_1 914 HAPSlaASSIEVVRALLDShQAQPNAQNKVGKTPLHLA---QSTDMVRVLL 961
                 566666889********6549*****************...6667777665 PP

  == domain 11    score: 2.9 bits;  conditional E-value: 0.089
   PF13637.1  13 rlelvklLlekgidinrt.desGntaL 38 
                  +++v+ Ll+ g d   + de+G+ta+
  MMETSP1325-20131115|9555_1 953 STDMVRVLLAAGGDAFELaDEDGRTAF 979
                 689**********************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0008       1.4      12      53 ..      92     130 ..      88     132 .. 0.92
   2 !   16.8   0.0   3.2e-06    0.0054      10      54 ..     153     195 ..     144     197 .. 0.90
   3 !    8.1   0.0    0.0017       2.9      10      54 ..     335     378 ..     324     379 .. 0.80
   4 !   26.6   0.3   2.5e-09   4.3e-06      18      53 ..     813     849 ..     807     852 .. 0.94
   5 ?    4.8   0.0     0.019        33      28      54 ..     886     912 ..     882     913 .. 0.86
   6 !   10.9   0.0   0.00022      0.38      28      56 .]     922     951 ..     917     951 .. 0.92
   7 !   13.4   0.0   3.6e-05     0.061       3      54 ..     931     980 ..     929     980 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0008
   PF13857.1  12 tdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53 
                  de+gntpLh+  +   +e +  Ll++g d+n+ ++ gl +l
  MMETSP1325-20131115|9555_1  92 VDEQGNTPLHVVES---PEEALTLLEHGGDINAVNKAGLVPL 130
                 6999*******999...********************99887 PP

  == domain 2    score: 16.8 bits;  conditional E-value: 3.2e-06
   PF13857.1  10 natdeggntpLhlAakggalevvrlLl.apgadlnlrdsdgltald 54 
                    de+gntpLh+  +   + v+++L+ +p +d n++++ gltal 
  MMETSP1325-20131115|9555_1 153 VIVDEQGNTPLHVFSS---PRVIKFLInHPLVDVNVTNTAGLTALM 195
                 5789************...*************************96 PP

  == domain 3    score: 8.1 bits;  conditional E-value: 0.0017
   PF13857.1  10 natdeggntpLhlAakggalevvrlLl.apgadl.nlrdsdgltald 54 
                  atd +gnt Lh+A     +e+vr Ll a g+++ +++++dg ta++
  MMETSP1325-20131115|9555_1 335 SATDHNGNTCLHIAKT---PEIVRVLLeAGGSNPrRIKNADGKTAYE 378
                 57888999********...********66666543678999999998 PP

  == domain 4    score: 26.6 bits;  conditional E-value: 2.5e-09
   PF13857.1  18 tpLhlAakggalevvrlLl.apgadlnlrdsdgltal 53 
                 +pLhlA+ gg+++vv+ L+ ++ +d n+ d  g+tal
  MMETSP1325-20131115|9555_1 813 HPLHLACAGGHVNVVKTLIaRKDVDRNALDGAGRTAL 849
                 8***********************************9 PP

  == domain 5    score: 4.8 bits;  conditional E-value: 0.019
   PF13857.1  28 alevvrlLlapgadlnlrdsdgltald 54 
                 ++  v+ L+  g+d+n++d+ g+ +l+
  MMETSP1325-20131115|9555_1 886 SAAEVQQLIGSGEDPNVKDAAGNAPLH 912
                 56679999999***********99997 PP

  == domain 6    score: 10.9 bits;  conditional E-value: 0.00022
   PF13857.1  28 alevvrlLl.apgadlnlrdsdgltaldlA 56 
                 + evvr Ll  ++a +n++++ g t+l+lA
  MMETSP1325-20131115|9555_1 922 SIEVVRALLdSHQAQPNAQNKVGKTPLHLA 951
                 689*************************99 PP

  == domain 7    score: 13.4 bits;  conditional E-value: 3.6e-05
   PF13857.1   3 ehgpadvnatdeggntpLhlAakggalevvrlLlapgadln.lrdsdgltald 54 
                 + ++a++na+++ g tpLhlA +   +++vr Lla+g d+  l d+dg+ta++
  MMETSP1325-20131115|9555_1 931 DSHQAQPNAQNKVGKTPLHLAQS---TDMVRVLLAAGGDAFeLADEDGRTAFE 980
                 555799***************99...********7777665166777799875 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0032       5.5       2      30 .]      96     121 ..      95     121 .. 0.95
   2 !   10.0   0.0   0.00046      0.79       2      29 ..     159     184 ..     158     185 .. 0.90
   3 ?   -2.9   0.0       6.7   1.1e+04       2      10 ..     190     198 ..     189     199 .. 0.86
   4 !    9.8   0.0   0.00053       0.9       1      25 [.     340     361 ..     340     366 .. 0.90
   5 !   11.0   0.1   0.00021      0.36       3      24 ..     812     833 ..     810     840 .. 0.86
   6 !   10.8   0.1   0.00025      0.43       2      30 .]     907     939 ..     906     939 .. 0.73
   7 !    7.2   0.0    0.0038       6.5       2      26 ..     944     965 ..     943     968 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0032
   PF13606.1   2 GnTpLhlAasngrielveaLlengadina 30 
                 GnTpLh++    ++e +  Lle+g dina
  MMETSP1325-20131115|9555_1  96 GNTPLHVV---ESPEEALTLLEHGGDINA 121
                 9*******...****************96 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00046
   PF13606.1   2 GnTpLhlAasngrielveaLleng.adin 29 
                 GnTpLh+     ++ ++++L++++ +d+n
  MMETSP1325-20131115|9555_1 159 GNTPLHVF---SSPRVIKFLINHPlVDVN 184
                 9*******...8889********977998 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 6.7
   PF13606.1   2 GnTpLhlAa 10 
                 G T+L+ A+
  MMETSP1325-20131115|9555_1 190 GLTALMKAV 198
                 89****997 PP

  == domain 4    score: 9.8 bits;  conditional E-value: 0.00053
   PF13606.1   1 nGnTpLhlAasngrielveaLleng 25 
                 nGnT+Lh+A   + +e+v+ Lle+g
  MMETSP1325-20131115|9555_1 340 NGNTCLHIA---KTPEIVRVLLEAG 361
                 8********...***********96 PP

  == domain 5    score: 11.0 bits;  conditional E-value: 0.00021
   PF13606.1   3 nTpLhlAasngrielveaLlen 24 
                 ++pLhlA+  g++++v+ L+ +
  MMETSP1325-20131115|9555_1 812 CHPLHLACAGGHVNVVKTLIAR 833
                 79*****************964 PP

  == domain 6    score: 10.8 bits;  conditional E-value: 0.00025
   PF13606.1   2 GnTpLhl.Aasng..rielveaLleng.adina 30 
                 Gn pLh+ A s    +ie+v+aLl+++ a++na
  MMETSP1325-20131115|9555_1 907 GNAPLHHhAPSLAasSIEVVRALLDSHqAQPNA 939
                 8889*86266643348********976488885 PP

  == domain 7    score: 7.2 bits;  conditional E-value: 0.0038
   PF13606.1   2 GnTpLhlAasngrielveaLlenga 26 
                 G TpLhlA   +++++v+ Ll +g 
  MMETSP1325-20131115|9555_1 944 GKTPLHLA---QSTDMVRVLLAAGG 965
                 78******...**********9885 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.3    0.0034       5.7       2      33 .]      96     124 ..      95     124 .. 0.78
   2 ?   -1.3   0.0       1.2   2.1e+03       8      29 ..     130     152 ..     130     155 .. 0.71
   3 ?    4.8   0.0     0.015        25       2      23 ..     159     177 ..     158     187 .. 0.73
   4 ?   -1.2   0.0       1.1   1.9e+03       2      10 ..     190     198 ..     189     201 .. 0.88
   5 !    7.0   0.0    0.0028       4.8       1      26 [.     340     362 ..     340     365 .. 0.86
   6 ?   -2.2   0.0       2.3   3.9e+03       6      15 ..     774     783 ..     773     791 .. 0.83
   7 !   20.4   0.2   1.6e-07   0.00028       4      32 ..     813     842 ..     811     843 .. 0.88
   8 ?    0.4   0.0      0.35   6.1e+02      18      32 ..     890     904 ..     884     905 .. 0.90
   9 !    9.6   0.0   0.00044      0.75      14      33 .]     922     942 ..     906     942 .. 0.89
  10 !    7.0   0.1    0.0028       4.9       2      27 ..     944     966 ..     943     968 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0034
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                 G+TPLH+     ++e +  Ll++G d+na+++
  MMETSP1325-20131115|9555_1  96 GNTPLHV---VESPEEALTLLEHGGDINAVNK 124
                 6777777...4677777789*********996 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 1.2
                 HHHHTTHHHHHHHHHH.TTSSTT CS
  PF00023.25   8 lAalrgnlevvklLls.qGAdln 29 
                 lAa+r++++  + Ll  +  ++n
  MMETSP1325-20131115|9555_1 130 LAAQRDSANTFTALLLdAWSNPN 152
                 68888888888888754555555 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.015
                 SCBHHHHHHHTTHHHHHHHHHH CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLls 23 
                 G+TPLH+     +++v+k+L++
  MMETSP1325-20131115|9555_1 159 GNTPLHVF---SSPRVIKFLIN 177
                 9*****95...56666666665 PP

  == domain 4    score: -1.2 bits;  conditional E-value: 1.1
                 SCBHHHHHH CS
  PF00023.25   2 GfTPLHlAa 10 
                 G T+L+ A+
  MMETSP1325-20131115|9555_1 190 GLTALMKAV 198
                 89****998 PP

  == domain 5    score: 7.0 bits;  conditional E-value: 0.0028
                 TSCBHHHHHHHTTHHHHHHHHHHTTS CS
  PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGA 26 
                 +G+T+LH+A     +e+v+ Ll++G 
  MMETSP1325-20131115|9555_1 340 NGNTCLHIA---KTPEIVRVLLEAGG 362
                 7*******9...99999999999876 PP

  == domain 6    score: -2.2 bits;  conditional E-value: 2.3
                 HHHHHHTTHH CS
  PF00023.25   6 LHlAalrgnl 15 
                 LH+A+  gn 
  MMETSP1325-20131115|9555_1 774 LHVASALGND 783
                 9****99975 PP

  == domain 7    score: 20.4 bits;  conditional E-value: 1.6e-07
                 BHHHHHHHTTHHHHHHHHHH.TTSSTTHBH CS
  PF00023.25   4 TPLHlAalrgnlevvklLls.qGAdlnaqd 32 
                  PLHlA+  g+++vvk L+  +  d na d
  MMETSP1325-20131115|9555_1 813 HPLHLACAGGHVNVVKTLIArKDVDRNALD 842
                 6******************98888888766 PP

  == domain 8    score: 0.4 bits;  conditional E-value: 0.35
                 HHHHHHTTSSTTHBH CS
  PF00023.25  18 vklLlsqGAdlnaqd 32 
                 v+ L++ G d+n++d
  MMETSP1325-20131115|9555_1 890 VQQLIGSGEDPNVKD 904
                 789**********98 PP

  == domain 9    score: 9.6 bits;  conditional E-value: 0.00044
                 HHHHHHHHHH.TTSSTTHBHT CS
  PF00023.25  14 nlevvklLls.qGAdlnaqdd 33 
                 ++evv+ Ll+ + A +naq++
  MMETSP1325-20131115|9555_1 922 SIEVVRALLDsHQAQPNAQNK 942
                 789****************96 PP

  == domain 10    score: 7.0 bits;  conditional E-value: 0.0028
                 SCBHHHHHHHTTHHHHHHHHHHTTSS CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAd 27 
                 G TPLHlA    ++++v+ Ll +G d
  MMETSP1325-20131115|9555_1 944 GKTPLHLA---QSTDMVRVLLAAGGD 966
                 89*****9...999999999999877 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   6.4e-06     0.011     120     170 ..     537     584 ..     520     594 .. 0.84
   2 ?    0.7   0.0      0.12   2.1e+02     115     170 ..    1118    1170 ..    1106    1177 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 6.4e-06
   PF06293.9 120 kralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarr 170
                  r+++e ++r ia +h+ g+ H+d+ + ni+   +e    ++liDld a+ 
  MMETSP1325-20131115|9555_1 537 IRQIFESLARSIAHLHAIGRIHGDIKPLNIVRAFDE---SIMLIDLDMAVN 584
                 58999*************************999998...********8865 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.12
   PF06293.9  115 laeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarr 170 
                  ++ +l ++++   +r+   +h++g+  +d+ + n++   ++   +  liD+d a+r
  MMETSP1325-20131115|9555_1 1118 VDLALGKTMFASFARALGHLHDRGLIQGDFKPGNVVRMPDG---TWILIDMDGAVR 1170
                  45566677888889999999999999999999999999888...899999987765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   6.6e-05      0.11      78     153 ..     514     585 ..     451     629 .. 0.82
   2 ?   -1.1   0.0      0.42   7.2e+02     187     199 ..     660     672 ..     656     710 .. 0.82
   3 ?    2.5   0.0     0.034        58      78     200 ..    1100    1231 ..    1088    1255 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.6e-05
                 EEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEES CS
  PF07714.12  78 ivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardi 153
                 iv+  ++ + +  f ++    klt++d+ ++   +a+ +++L++   +H d+   N+  + ++ + + D  +a ++
  MMETSP1325-20131115|9555_1 514 IVMPCAQRNLMVIFFQE----KLTMSDIRQIFESLARSIAHLHAIGRIHGDIKPLNIVRAFDESIMLIDLDMAVNL 585
                 55555555555555544....6***********************************9999999999999888877 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.42
                 HHHH---HHHHHH CS
  PF07714.12 187 DvWsfGvllwEif 199
                 D Ws+ v+l+  +
  MMETSP1325-20131115|9555_1 660 DLWSYAVVLYYAI 672
                 99*******9554 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.034
                  EEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGE.........EEETTTEEEE---....--CEESTTTSCEEESTT-E.ECGGGS..-HHHHHHSEEEHHHHHHH---HHHHHHT CS
  PF07714.12   78 ivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNv.........LleeekvvkisDf....GLardiekddyykkkeeak.lpvkWm..apEslkekkftsksDvWsfGvllwEift 200 
                  iv+  ++ + ++ +L+++    ++l+    + +  a+++ +L+++ l+  d    Nv         L++ +  v+i+D     GL+   +  +  ++++++  ++v+    + E+l++     + D Wsf v+l+ ++ 
  MMETSP1325-20131115|9555_1 1100 IVMPAAERNLMDVLLKER----VDLALGKTMFASFARALGHLHDRGLIQGDFKPGNVvrmpdgtwiLIDMDGAVRIGDPigakGLSTAFMPPEACHVQGDEVvFRVRREgaPYEVLEA---HPTLDLWSFFVVLYRVVV 1231
                  555555544444334333....555555567778888899999999999998888862222222225555888888885555588888877777755555442444433314455444...456799999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.81u 0.36s 00:00:02.17 Elapsed: 00:00:01.07
# Mc/sec: 2920.42
//
Query:       MMETSP1325-20131115|9563_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       759  (0.0555149); expected 273.4 (0.02)
Passed bias filter:                      593  (0.0433733); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.62
# Mc/sec: 266.69
//
Query:       MMETSP1325-20131115|9561_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 589.50
//
Query:       MMETSP1325-20131115|9564_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.3   1.9       0.23   10.8   1.3    1.2  1  PF11706.3 CGNR zinc finger


Domain annotation for each model (and alignments):
>> PF11706.3  CGNR zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.3   1.7e-05      0.23       4      32 ..      37      65 ..      34      71 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.7e-05
   PF11706.3  4 aCaapdCrw.lflDtsrngsRrWCsmarCG 32
                +C+   C++ +++D+  +    +C+ ++C+
  MMETSP1325-20131115|9564_1 37 RCSRSGCDRvVYVDKQSGWVHDYCG-RTCA 65
                8******862688999999******.***8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|9565_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 792.26
//
Query:       MMETSP1325-20131115|9566_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|9569_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.3   10.9   3.3        3.1    7.6   0.2    2.1  2  PF05198.11 Translation initiation factor IF-3, N-terminal domain
        2.2    8.3   9.1    2.2e+02    1.9   6.2    2.2  1  PF13400.1  Putative Flp pilus-assembly TadE/G-like


Domain annotation for each model (and alignments):
>> PF05198.11  Translation initiation factor IF-3, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.2   0.00045       3.1      23      48 ..      13      38 ..       5      42 .. 0.80
   2 ?    5.0   0.2    0.0029        20      27      48 ..      41      62 ..      38      65 .] 0.87

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00045
  PF05198.11 23 eqlGvvstreAlrlAeekglDLVevs 48
                 ql   + ++A++ A   g+DLV v+
  MMETSP1325-20131115|9569_1 13 AQLQRPQVAQAVEGAALDGVDLVVVQ 38
                5555567899*************998 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0029
  PF05198.11 27 vvstreAlrlAeekglDLVevs 48
                 +++++A++ A   g+D V v+
  MMETSP1325-20131115|9569_1 41 NIQAAQAVEGAALDGIDIVVVQ 62
                57899**************997 PP

>> PF13400.1  Putative Flp pilus-assembly TadE/G-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   6.2     0.032   2.2e+02      22      45 ..       8      31 ..       2      58 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.032
   PF13400.1 22 vDvgrallartrlQsAADaAALAa 45
                vDv +a l+r ++++A++ AAL +
  MMETSP1325-20131115|9569_1  8 VDVVGAQLQRPQVAQAVEGAALDG 31
                789999999999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 293.89
//
Query:       MMETSP1325-20131115|9567_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.24   11.2   1.0         26    4.7   0.2    2.7  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0    0.0023        32      22      33 ..      92     105 ..      70     107 .. 0.79
   2 ?    4.7   0.2    0.0019        26      13      30 ..     115     132 ..     111     173 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.0023
                 S..STEEEEEETTS CS
  PF00400.27  22 d..gpllasgSrDg 33 
                 +  g+lla++S Dg
  MMETSP1325-20131115|9567_1  92 EnhGQLLACASLDG 105
                 1669*********9 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0019
                 SEEEEEEESSSTEEEEEE CS
  PF00400.27  13 pVtcvafspdgpllasgS 30 
                 +Vt+v+ sp+g +++ g+
  MMETSP1325-20131115|9567_1 115 FVTSVKLSPSGAFVLLGC 132
                 7*********77766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1038.42
//
Query:       MMETSP1325-20131115|9568_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 689.56
//
Query:       MMETSP1325-20131115|9570_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       463  (0.0338648); expected 273.4 (0.02)
Passed bias filter:                      417  (0.0305003); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 661.22
//
Query:       MMETSP1325-20131115|9574_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       587  (0.0429345); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.44s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 361.71
//
Query:       MMETSP1325-20131115|9577_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        85  (0.00621709); expected 273.4 (0.02)
Passed bias filter:                       82  (0.00599766); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 164.19
//
Query:       MMETSP1325-20131115|9575_1  [L=385]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.74u 0.37s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1647.50
//
Query:       MMETSP1325-20131115|9578_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-12   45.9   3.1    3.1e-05   23.2   0.6    3.1  3  PF00515.23 Tetratricopeptide repeat
    4.5e-11   42.1   1.1    6.5e-06   25.5   0.0    2.3  2  PF13414.1  TPR repeat
    2.8e-08   32.9   3.5     0.0014   18.2   0.3    3.2  3  PF07719.12 Tetratricopeptide repeat
    0.00031   20.1   0.3      0.012   15.2   0.2    2.6  3  PF13181.1  Tetratricopeptide repeat
    0.00035   21.0   1.2    0.00035   21.0   0.8    2.1  2  PF13432.1  Tetratricopeptide repeat
    0.00055   19.8   0.4      0.086   12.9   0.0    2.5  2  PF13431.1  Tetratricopeptide repeat
     0.0019   17.9   3.2     0.0035   17.1   2.2    1.5  1  PF13424.1  Tetratricopeptide repeat
     0.0022   17.9   0.8     0.0042   17.0   0.5    1.5  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
  ------ inclusion threshold ------
      0.033   13.3   0.0      0.049   12.7   0.0    1.2  1  PF00767.13 Potyvirus coat protein
      0.047   13.8   0.2      0.047   13.8   0.2    1.5  2  PF03704.12 Bacterial transcriptional activator domain
       0.16   11.7   3.1       0.73    9.6   0.8    2.7  2  PF13176.1  Tetratricopeptide repeat
       0.19   12.1   3.8       0.79   10.1   0.4    2.5  2  PF13174.1  Tetratricopeptide repeat
       0.51   11.0   7.6       0.67   10.6   0.3    3.0  3  PF13428.1  Tetratricopeptide repeat
       0.62    9.8   0.0       0.62    9.8   0.0    2.6  2  PF13371.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0       0.3   2.9e+02      27      33 ..       7      13 ..       2      14 .. 0.82
   2 !   19.6   0.0   4.5e-07   0.00044       3      31 ..      17      45 ..      16      46 .. 0.92
   3 !   23.2   0.6   3.1e-08   3.1e-05       3      27 ..      51      75 ..      50      78 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.3
                HHHHHTT CS
  PF00515.23 27 ALelnPn 33
                A+el+P+
  MMETSP1325-20131115|9578_1  7 AIELDPT 13
                9*****7 PP

  == domain 2    score: 19.6 bits;  conditional E-value: 4.5e-07
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23  3 alynlGnaylklgkydeAleyyekALeln 31
                a+ ++++aylkl+k+ eAl++ + A++ +
  MMETSP1325-20131115|9578_1 17 AFTGRAAAYLKLNKHTEALQDANTAISQD 45
                6889*********************9865 PP

  == domain 3    score: 23.2 bits;  conditional E-value: 3.1e-08
                HHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF00515.23  3 alynlGnaylklgkydeAleyyekA 27
                a+y++G+a+++l++y+ Al+++++ 
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETALAAFKQG 75
                9*********************986 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   6.6e-09   6.5e-06      26      67 ..       4      44 ..       1      46 [. 0.90
   2 !   14.9   0.3   1.4e-05     0.013       5      33 ..      51      79 ..      48      90 .. 0.87

  Alignments for each domain:
  == domain 1    score: 25.5 bits;  conditional E-value: 6.6e-09
   PF13414.1 26 yekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                +  A+eldp    ++ ++A+aylkl+k   eAl+d++ A++ 
  MMETSP1325-20131115|9578_1  4 FGLAIELDPTLTGAFTGRAAAYLKLNK-HTEALQDANTAISQ 44
                667**********************96.69*********986 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 1.4e-05
   PF13414.1  5 alkelGnalfkegdydeAieayekAleld 33
                a++++G a+f++ +y+ A++a++++ +l 
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETALAAFKQGQSLV 79
                8**********************997774 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.71     7e+02      24      33 ..       4      13 ..       2      14 .. 0.81
   2 !   13.0   0.1   6.8e-05     0.067       6      31 ..      20      45 ..      16      48 .. 0.90
   3 !   18.2   0.3   1.4e-06    0.0014       3      29 ..      51      77 ..      50      81 .. 0.91

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.71
                HHHHHHH-TT CS
  PF07719.12 24 fekAleldPn 33
                f  A+eldP+
  MMETSP1325-20131115|9578_1  4 FGLAIELDPT 13
                5669*****8 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 6.8e-05
                HHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12  6 nlGlayyklgdyeeAleafekAleld 31
                 ++ ay+kl+++ eAl++ + A++ d
  MMETSP1325-20131115|9578_1 20 GRAAAYLKLNKHTEALQDANTAISQD 45
                699*******************9876 PP

  == domain 3    score: 18.2 bits;  conditional E-value: 1.4e-06
                HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
  PF07719.12  3 alynlGlayyklgdyeeAleafekAle 29
                a+y+ Gla+++l +ye Al+af++  +
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETALAAFKQGQS 77
                8*********************99765 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       6.1   5.9e+03      24      32 ..       4      12 ..       2      13 .. 0.78
   2 ?    1.7   0.0      0.24   2.4e+02       8      28 ..      22      42 ..      16      46 .. 0.81
   3 !   15.2   0.2   1.2e-05     0.012       3      28 ..      51      76 ..      49      79 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 6.1
                HH---HHHH CS
   PF13181.1 24 lekalelkp 32
                +  a+el+p
  MMETSP1325-20131115|9578_1  4 FGLAIELDP 12
                667999998 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.24
                --HHHHTT-HHHHHHHHH--- CS
   PF13181.1  8 GdiYrqlGdydkAkeylekal 28
                + +Y++l+++ +A++  + a+
  MMETSP1325-20131115|9578_1 22 AAAYLKLNKHTEALQDANTAI 42
                56899*****99999877776 PP

  == domain 3    score: 15.2 bits;  conditional E-value: 1.2e-05
                -TTT---HHHHTT-HHHHHHHHH--- CS
   PF13181.1  3 ayynlGdiYrqlGdydkAkeylekal 28
                ayy++G++ ++l +y+ A++++++  
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETALAAFKQGQ 76
                7*********************9865 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.8   3.6e-07   0.00035       3      56 ..      21      74 ..      19      80 .. 0.95
   2 ?   -0.0   0.8       1.4   1.4e+03      50      60 ..     120     130 ..     115     139 .. 0.52

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 3.6e-07
   PF13432.1  3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallra 56
                +A a+l++++  eAl+  ++a+ ++  +  a+++ + a+++l +++ A+a++++
  MMETSP1325-20131115|9578_1 21 RAAAYLKLNKHTEALQDANTAISQDGACEVAYYRKGLACFELEEYETALAAFKQ 74
                799**********************99**********************99875 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 1.4
   PF13432.1  50 Aaallraalal 60 
                 Aaa+ +aa+a 
  MMETSP1325-20131115|9578_1 120 AAAAAAAAAAS 130
                 44333333333 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   8.8e-05     0.086       5      34 .]       7      36 ..       5      36 .. 0.97
   2 ?    4.5   0.1     0.043        42      15      33 ..      51      69 ..      50      70 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 8.8e-05
   PF13431.1  5 aleldPnnadaynnLAelllnnGdleeAeq 34
                a+eldP+ + a++ +A ++l+++++ eA+q
  MMETSP1325-20131115|9578_1  7 AIELDPTLTGAFTGRAAAYLKLNKHTEALQ 36
                8**************************987 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.043
   PF13431.1 15 aynnLAelllnnGdleeAe 33
                ay++++++ +++ ++e+A+
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETAL 69
                8****************97 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   2.2   3.6e-06    0.0035       5      74 ..      15      77 ..      11      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 3.6e-06
   PF13424.1  5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74
                  + +  a ++++l ++ eAl+  ++a+          + + +a++  + ++ +l++y+ Al+ +++   
  MMETSP1325-20131115|9578_1 15 TGAFTGRAAAYLKLNKHTEALQDANTAISQ---D----GACEVAYYRKGLACFELEEYETALAAFKQGQS 77
                56677899*************888888744...3....467789**********************9765 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.5   4.3e-06    0.0042      32      82 ..      22      73 ..       4      84 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 4.3e-06
                HHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHH.HHHHHHTT-HHHHCCCHH CS
   PF12895.2 32 AlclylngeykrAyellrk.leldssslgcryll.ArcllklgkydeAiavLe 82
                A ++++++++++A++  ++   +d   ++ +y   + ++++l++y+ A+a+++
  MMETSP1325-20131115|9578_1 22 AAAYLKLNKHTEALQDANTaISQDGA-CEVAYYRkGLACFELEEYETALAAFK 73
                889**********9999774444444.57888777***************987 PP

>> PF00767.13  Potyvirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   5.1e-05     0.049      40      82 ..      68     110 ..      57     112 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.1e-05
  PF00767.13  40 hllkYkpeqedlsntratqeqfetWyeevkeeydvddeemkil 82 
                  l  +k+ q+ +s + a ++++++W+++ ++e++ ++eem+++
  MMETSP1325-20131115|9578_1  68 ALAAFKQGQSLVSEKNAGKRNYSRWVRKCETEIEDEEEEMEVV 110
                 5788999*********************************997 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.2   4.8e-05     0.047      60     126 ..      13      79 ..       5      82 .. 0.90
   2 ?   -2.8   0.1       6.4   6.2e+03      27      30 ..     122     125 ..     101     139 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.8e-05
  PF03704.12  60 lrlealealieadlrlgrheellaelealvalhPlrErlhrqlmrAlyrsGrqaeALevYrrlrrrL 126
                   + a++ +++a l+l++h e+l+++  +++++   E ++ +  +A + +++ ++AL+++++ ++  
  MMETSP1325-20131115|9578_1  13 TLTGAFTGRAAAYLKLNKHTEALQDANTAISQDGACEVAYYRKGLACFELEEYETALAAFKQGQSLV 79 
                 56778999****************************************************9987655 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 6.4
  PF03704.12  27 rlle 30 
                 ++++
  MMETSP1325-20131115|9578_1 122 AAAA 125
                 1111 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.58   5.7e+02       6      19 ..      22      35 ..      18      36 .. 0.87
   2 ?    9.6   0.8   0.00075      0.73       1      25 [.      51      77 ..      51     108 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.58
   PF13176.1  6 arlysrlgdyekAi 19
                a +y +l+++ +A+
  MMETSP1325-20131115|9578_1 22 AAAYLKLNKHTEAL 35
                67999*****9997 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00075
   PF13176.1  1 allnLarlysrlgdyekAielyer..a 25
                a+++ + ++++l +ye+A+ ++++  +
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETALAAFKQgqS 77
                6788899****************9554 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1      0.23   2.3e+02       6      28 ..      21      43 ..      17      45 .. 0.80
   2 ?   10.1   0.4   0.00081      0.79       2      25 ..      51      74 ..      50      74 .. 0.93

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.23
                HHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  6 lalsyyklgdtdeAlealerlik 28
                +a +y+kl++++eAl+  +  i+
  MMETSP1325-20131115|9578_1 21 RAAAYLKLNKHTEALQDANTAIS 43
                577999999999**997777665 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00081
                HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF13174.1  2 AlyklalsyyklgdtdeAlealer 25
                A+y+ +l+ ++l +++ Al+a+++
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETALAAFKQ 74
                9**********88*********86 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.3   0.00068      0.67       3      41 ..      17      55 ..      15      58 .. 0.87
   2 ?    5.9   0.1     0.022        21       3      27 ..      51      75 ..      49      85 .. 0.89
   3 ?   -1.0   0.3       3.7   3.6e+03      20      29 ..     120     129 ..     115     134 .. 0.53

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00068
   PF13428.1  3 allalarallalGdpdeAiallrralalaPddaealllL 41
                a   +a+a+l l+ + eA++ ++ a++++   + a+++ 
  MMETSP1325-20131115|9578_1 17 AFTGRAAAYLKLNKHTEALQDANTAISQDGACEVAYYRK 55
                66789************************9888888765 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.022
   PF13428.1  3 allalarallalGdpdeAiallrra 27
                a+++ + a+++l++++ A+a++++ 
  MMETSP1325-20131115|9578_1 51 AYYRKGLACFELEEYETALAAFKQG 75
                789999***************9986 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 3.7
   PF13428.1  20 Aiallrrala 29 
                 A+a++ +a+a
  MMETSP1325-20131115|9578_1 120 AAAAAAAAAA 129
                 4444444433 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00064      0.62      24      60 ..      10      46 ..       6      53 .. 0.81
   2 ?    2.9   0.1      0.09        88      35      52 ..      55      72 ..      51      75 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00064
   PF13371.1 24 laPddpyerRDrGlllaqlgclaaAaedLeaflelcp 60
                l+P        r+ ++ +l+ +++A++d ++++ ++ 
  MMETSP1325-20131115|9578_1 10 LDPTLTGAFTGRAAAYLKLNKHTEALQDANTAISQDG 46
                666666666679******************9998875 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.09
   PF13371.1 35 rGlllaqlgclaaAaedL 52
                 Gl+ ++l++++ A++++
  MMETSP1325-20131115|9578_1 55 KGLACFELEEYETALAAF 72
                69999********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       645  (0.0471767); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 809.34
//
Query:       MMETSP1325-20131115|9580_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-36  122.8   0.0    1.1e-35  122.6   0.0    1.0  1  PF02542.11 YgbB family


Domain annotation for each model (and alignments):
>> PF02542.11  YgbB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.6   0.0   7.9e-40   1.1e-35      31     137 ..       3     115 ..       1     116 [] 0.93

  Alignments for each domain:
  == domain 1    score: 122.6 bits;  conditional E-value: 7.9e-40
  PF02542.11  31 llghSDgDvllHAlvDAllgalglgdiGelFpdtdekykgadsaklLeevvklvkkkgyeianvditiiaerpki......spyreeireniakllgieesqvsvkatttekl 137
                  ++hSDgDv++H++vDA+lgal++ diG+lFpd+d++ kg +s++++ee++k ++++gy+i+n+d+t+i +rpk+      +++++++++n  +ll+++  qv+vka+t+ekl
  MMETSP1325-20131115|9580_1   3 AVAHSDGDVVYHSVVDAILGALSMPDIGQLFPDNDPRLKGSNSEIFMEEAYKRMTERGYAIGNCDVTLILQRPKVniehngKHVKDTMTANCVRLLRTSPGQVNVKARTHEKL 115
                 589***********************************************************************944444336799**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 604.30
//
Query:       MMETSP1325-20131115|9581_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                       66  (0.00482738); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 188.94
//
Query:       MMETSP1325-20131115|9582_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.1    6.8   5.9        5.1    6.8   4.1    1.1  1  PF06679.7 Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   4.1   0.00037       5.1      28      74 ..      21      66 ..       4      67 .] 0.78

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00037
   PF06679.7 28 allseaesaassePeprtlsalpPgptpanptalleadakkGkaset 74
                +  ++ ++a+s++P+p + + ++P+  + +p  l+ ++a++G+a+++
  MMETSP1325-20131115|9582_1 21 SAHHTMGAATSTSPTPSNAP-TTPTDRAPQPSTLTAMAAAQGSAASA 66
                44566778888999999988.78999889999999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|9584_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       612  (0.044763); expected 273.4 (0.02)
Passed bias filter:                      557  (0.0407402); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|9588_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|9589_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|9590_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 350.90
//
Query:       MMETSP1325-20131115|9585_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0052   16.4   3.9     0.0088   15.6   2.7    1.3  1  PF04360.7 Serglycin
  ------ inclusion threshold ------
       0.33   10.8   1.3          1    9.2   0.9    1.8  1  PF04568.7 Mitochondrial ATPase inhibitor, IATP
        1.4    6.9  16.9        1.5    6.8  11.7    1.1  1  PF09770.4 Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PF04360.7  Serglycin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   2.7   1.9e-06    0.0088      86     111 ..      33      56 ..      12      63 .. 0.68

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.9e-06
   PF04360.7  86 plsedysgsgsgsGsGsGsgsGsGfl 111
                 pl+   sgsgsgsGsG+G+g+Gs  +
  MMETSP1325-20131115|9585_1  33 PLATPASGSGSGSGSGAGAGAGS--V 56 
                 66666666666666666666665..4 PP

>> PF04568.7  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.9   0.00023         1      31      57 ..      40      66 ..      22      70 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00023
   PF04568.7 31 egetgsGagkggGgGsireaggaFgkr 57
                 +  gsG+g g G Gs+ +a++ F  +
  MMETSP1325-20131115|9585_1 40 GSGSGSGSGAGAGAGSVASASDPFASM 66
                334457888888889*********987 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  11.7   0.00033       1.5     217     299 ..      62     144 ..       7     199 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00033
   PF09770.4 217 qqqlqqapsqapaqaplpaqlpqqlqnlq..qqqlpqlsqqmppqpvqppqqqqqqvlklpqaqppplqqlsasp.qlaqqqlasl 299
                 +++++ ap+ + +  p+p  ++ ++ ++   +++l q+ qq+++qp+q+p qq+++++++p + +p+ ++++++  q+++     +
  MMETSP1325-20131115|9585_1  62 PFASMMAPATVGMGKPFPVAASDPFAAMDqtAKPLTQPMQQPMQQPMQQPMQQPMRPMHQPMQPMPAFGSQPMQFaQPPA---MGT 144
                 35566666666666666666666666665335667777888888888888888888998888888888854444313333...222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       402  (0.0294032); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.49
# Mc/sec: 1604.09
//
Query:       MMETSP1325-20131115|9591_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|9587_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.32    9.6   8.8       0.72    8.5   0.6    2.1  2  PF01698.11 Floricaula / Leafy protein


Domain annotation for each model (and alignments):
>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   1.2   0.00032       4.4     163     219 ..      45     113 ..      14     136 .. 0.45
   2 ?    8.5   0.6   5.2e-05      0.72     187     216 ..     187     216 ..     148     219 .] 0.55

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00032
  PF01698.11 163 sggeglgeaelvaaee..kkseeekkkaskkkqkrkkkkelkse.................ededeeeeededeeg 219
                  ++   +e++++aa+e  ++  +e+ ka  +k+k kkkk++k+                       + + d d ++
  MMETSP1325-20131115|9587_1  45 KARL--EERRAAAAKEaeTSAAQEEAKAPPEKKK-KKKKKMKAPppsapppqpsiqadedyA----DADWDADAKD 113
                 2222..2222222222113333333333222333.333332332567777777776432221....2222222222 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 5.2e-05
  PF01698.11 187 kaskkkqkrkkkkelkseededeeeeeded 216
                 +++++k+kr++++e++++e+e+eeeee+e+
  MMETSP1325-20131115|9587_1 187 REEEDKKKRQREEEQEEAEEEEEEEEEEEE 216
                 222223333333333333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1402  (0.102545); expected 273.4 (0.02)
Passed bias filter:                      562  (0.0411059); expected 273.4 (0.02)
Passed Vit filter:                       148  (0.010825); expected 13.7 (0.001)
Passed Fwd filter:                        65  (0.00475424); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.02u 0.38s 00:00:01.40 Elapsed: 00:00:00.57
# Mc/sec: 904.83
//
Query:       MMETSP1325-20131115|9592_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1061.24
//
Query:       MMETSP1325-20131115|9593_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-22   78.2   0.0    5.6e-22   77.9   0.0    1.1  1  PF05711.6 Macrocin-O-methyltransferase (TylF)
  ------ inclusion threshold ------
       0.23   11.3   5.1        3.2    7.6   0.6    2.1  2  PF13160.1 Protein of unknown function (DUF3995)


Domain annotation for each model (and alignments):
>> PF05711.6  Macrocin-O-methyltransferase (TylF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   0.0   8.1e-26   5.6e-22     174     247 ..       2      75 ..       1      77 [. 0.97

  Alignments for each domain:
  == domain 1    score: 77.9 bits;  conditional E-value: 8.1e-26
   PF05711.6 174 apierlavlrldGdlyestidaltslypklspGGfvivddyaidacreavkdyrdkhGitdeieeidrtgvyWr 247
                 ap+erl++lr+d d+y st ++l+ +ypkl +GG+v+ dd++++  r+a+ dyr+khGit+++ ++++ g+y+ 
  MMETSP1325-20131115|9593_1   2 APVERLSLLRVDSDIYVSTYETLEFMYPKLEVGGYVMFDDFKLKYSRAAIIDYRAKHGITEPMYKMEHVGIYFN 75 
                 8***********************************************************************86 PP

>> PF13160.1  Protein of unknown function (DUF3995)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.6   0.00047       3.2      10      56 ..      86     132 ..      85     154 .. 0.82
   2 ?    5.7   0.5    0.0018        13      15      66 ..     141     195 ..     138     205 .. 0.63

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00047
   PF13160.1  10 lyWAlGgrwgldaeaipaedvkaafaPsaaatllvaaalllaaalvl 56 
                 lyW    +++ + +++p+ +   + +P+++a +++aa+l++a+a  +
  MMETSP1325-20131115|9593_1  86 LYWQKSKQIASEPVQSPKPKLLIPPQPGTVAEAALAAVLAAASAESV 132
                 799999999999999999999********************976554 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0018
   PF13160.1  15 Ggrwgldaeaipaedv.....kaafaPsaaatllvaaalllaaalvllqagivgpvp 66 
                 Gg+ ++++ ai +         + +  +++ ++++aa++ laa++  +q+  ++p++
  MMETSP1325-20131115|9593_1 141 GGQAPAQT-AIEVGGEatpssSELQESTWLEVAVLAALVSLAAIASRVQRR-WHPGV 195
                 56666666.443333345665566777777788888888888888888884.44443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 1020.85
//
Query:       MMETSP1325-20131115|9597_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-08   31.8   0.5    9.9e-05   21.6   0.1    2.5  2  PF00515.23 Tetratricopeptide repeat
    3.2e-06   26.5   0.1    3.2e-06   26.5   0.1    1.8  2  PF13414.1  TPR repeat
    2.4e-05   23.7   3.1    0.00031   20.3   0.0    2.9  3  PF07719.12 Tetratricopeptide repeat
    0.00065   19.4   0.0    0.00094   18.8   0.0    1.2  1  PF13371.1  Tetratricopeptide repeat
     0.0028   17.4   0.2      0.005   16.7   0.1    1.4  1  PF08321.7  PPP5 TPR repeat region
  ------ inclusion threshold ------
      0.011   15.8   0.1      0.022   14.8   0.0    1.5  1  PF13431.1  Tetratricopeptide repeat
      0.041   13.5   0.0       0.12   12.1   0.0    1.8  2  PF12968.2  Domain of Unknown Function (DUF3856)
       0.05   12.3   0.1      0.053   12.2   0.1    1.0  1  PF10255.4  RNA polymerase I-associated factor PAF67
      0.076   13.5   0.4       0.46   11.0   0.1    2.0  2  PF13432.1  Tetratricopeptide repeat
      0.094   12.4   0.1       0.29   10.9   0.1    1.8  1  PF13181.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0012       1.6      14      34 .]       5      25 ..       2      25 .. 0.86
   2 !   21.6   0.1   7.2e-08   9.9e-05       2      33 ..      27      58 ..      26      59 .. 0.91

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0012
                TT-HHHHHHHHHHHHHHHTTH CS
  PF00515.23 14 lgkydeAleyyekALelnPnn 34
                 + y  A+++ +  Le++P++
  MMETSP1325-20131115|9597_1  5 SESYGLAIADADMSLEIDPKY 25
                566889*************97 PP

  == domain 2    score: 21.6 bits;  conditional E-value: 7.2e-08
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23  2 kalynlGnaylklgkydeAleyyekALelnPn 33
                ka+y+++   + lgky+ Al++++ + +  P+
  MMETSP1325-20131115|9597_1 27 KAYYRRASGNFALGKYKLALKDFKTVCKMVPK 58
                8***********************99887776 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1   2.3e-09   3.2e-06      16      66 ..       5      54 ..       2      57 .. 0.90
   2 ?   -1.0   0.2      0.89   1.2e+03      58      65 ..      66      73 ..      58      82 .. 0.55

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 2.3e-09
   PF13414.1 16 egdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66
                   y  Ai+  + +le+dp++ ++yy++A   + lg +y+ Al+d++ + +
  MMETSP1325-20131115|9597_1  5 SESYGLAIADADMSLEIDPKYIKAYYRRASGNFALG-KYKLALKDFKTVCK 54
                567889******************************.6********98766 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.89
   PF13414.1 58 ledyekAl 65
                +++++kA+
  MMETSP1325-20131115|9597_1 66 YKECDKAV 73
                33344443 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.083   1.1e+02      16      34 .]       7      25 ..       2      25 .. 0.82
   2 !   20.3   0.0   2.3e-07   0.00031       2      34 .]      27      59 ..      26      59 .. 0.94
   3 ?   -0.8   0.3       1.2   1.7e+03      23      26 ..      65      68 ..      60      80 .. 0.57

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.083
                -HHHHHHHHHHHHHH-TTS CS
  PF07719.12 16 dyeeAleafekAleldPnn 34
                 y  A+++ + +le+dP++
  MMETSP1325-20131115|9597_1  7 SYGLAIADADMSLEIDPKY 25
                57789999999******85 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 2.3e-07
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldPnn 34
                +a+y+++   ++lg+y+ Al++f+ + +  P++
  MMETSP1325-20131115|9597_1 27 KAYYRRASGNFALGKYKLALKDFKTVCKMVPKD 59
                79*************************999976 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 1.2
                HHHH CS
  PF07719.12 23 afek 26
                 +++
  MMETSP1325-20131115|9597_1 65 KYKE 68
                4443 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   6.9e-07   0.00094       8      66 ..       5      63 ..       3      68 .. 0.92

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 6.9e-07
   PF13371.1  8 eedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapdae 66
                +e +  A+a ++++l+++P     ++ r+   + lg +  A++d+ +  +  p + +a+
  MMETSP1325-20131115|9597_1  5 SESYGLAIADADMSLEIDPKYIKAYYRRASGNFALGKYKLALKDFKTVCKMVPKDKQAR 63
                678889*******************************************9999888776 PP

>> PF08321.7  PPP5 TPR repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   3.6e-06     0.005       1      22 [.      65      86 ..      65      91 .] 0.87

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 3.6e-06
   PF08321.7  1 KlkeCeklvkkiaFekAIevde 22
                K+keC+k+vk+ aF +AI  +e
  MMETSP1325-20131115|9597_1 65 KYKECDKAVKEAAFAAAIVSEE 86
                9*****************9855 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.6e-05     0.022       5      33 ..      18      46 ..      16      47 .. 0.94

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.6e-05
   PF13431.1  5 aleldPnnadaynnLAelllnnGdleeAe 33
                +le+dP++  ay+++A   +++G+++ A+
  MMETSP1325-20131115|9597_1 18 SLEIDPKYIKAYYRRASGNFALGKYKLAL 46
                69************************997 PP

>> PF12968.2  Domain of Unknown Function (DUF3856)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   8.6e-05      0.12      98     134 ..      24      60 ..       6      71 .. 0.88
   2 ?    0.1   0.0      0.41   5.6e+02      14      31 ..      67      84 ..      57      88 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 8.6e-05
   PF12968.2  98 lWiaavfsravaleelGrkeealkefrkagemiaerk 134
                  +i+a ++ra +  +lG+ + alk f++++ m+   k
  MMETSP1325-20131115|9597_1  24 KYIKAYYRRASGNFALGKYKLALKDFKTVCKMVPKDK 60 
                 689*****************************97554 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.41
   PF12968.2 14 seaekkleegayeeaaas 31
                 e +k ++e+a+++a  s
  MMETSP1325-20131115|9597_1 67 KECDKAVKEAAFAAAIVS 84
                345555555555555444 PP

>> PF10255.4  RNA polymerase I-associated factor PAF67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   3.9e-05     0.053     155     215 ..      17      73 ..       7      88 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.9e-05
   PF10255.4 155 lyskvaaayvsllyyvGfaylmlrrYkdAirvlsqillylaktkqllssksyqqdaiaKki 215
                 +  ++ + y++ +y  +   + l++Yk A + +++++ ++ k kq   +   ++++  K  
  MMETSP1325-20131115|9597_1  17 MSLEIDPKYIKAYYRRASGNFALGKYKLALKDFKTVCKMVPKDKQ-ARA---KYKECDKAV 73 
                 55678999************************************4.333...333333332 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0011       1.5      13      54 ..       8      49 ..       2      60 .. 0.78
   2 ?   11.0   0.1   0.00034      0.46       8      54 ..      37      83 ..      30      91 .] 0.83

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0011
   PF13432.1 13 ydeAlaaleaalalaPeaaeallllaeallrlgrldeAaall 54
                y  A+a  +  l+ +P++  a++++a   ++lg+++ A++ +
  MMETSP1325-20131115|9597_1  8 YGLAIADADMSLEIDPKYIKAYYRRASGNFALGKYKLALKDF 49
                66666666666777899*******************999655 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00034
   PF13432.1  8 lraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaall 54
                +++G+y+ Al+ ++++ +  P++ +a+  + e+  + ++ + Aaa  
  MMETSP1325-20131115|9597_1 37 FALGKYKLALKDFKTVCKMVPKDKQARAKYKECDKAVKEAAFAAAIV 83
                789************************99999999998888888544 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00021      0.29       2      32 ..      27      57 ..      26      60 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00021
                --TTT---HHHHTT-HHHHHHHHH---HHHH CS
   PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelkp 32
                kayy++++  + lG+y++A++ ++ + ++ p
  MMETSP1325-20131115|9597_1 27 KAYYRRASGNFALGKYKLALKDFKTVCKMVP 57
                799999999***************9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      433  (0.0316706); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 436.14
//
Query:       MMETSP1325-20131115|9598_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-07   31.6   0.2    2.4e-07   30.7   0.0    1.5  2  PF04695.8 Peroxisomal membrane anchor protein (Pex14p) conserved region


Domain annotation for each model (and alignments):
>> PF04695.8  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.23   3.1e+03      59      67 ..      14      22 ..       3      34 .. 0.41
   2 !   30.7   0.0   1.7e-11   2.4e-07       2      58 ..      37      93 ..      36     127 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.23
   PF04695.8 59 teaaqstse 67
                +e+a+++ +
  MMETSP1325-20131115|9598_1 14 EEEATKQAI 22
                222222222 PP

  == domain 2    score: 30.7 bits;  conditional E-value: 1.7e-11
   PF04695.8  2 RedlvesAvkFLqdpsVrdsplekKvaFLesKGLteeEIdealkragnseatsstaa 58
                Redlv+  v+FL  ps +d  +++   FLe+KGLt +E+ eal + +++e +  +a+
  MMETSP1325-20131115|9598_1 37 REDLVSLGVTFLCGPSNKDRDTAELLVFLEGKGLTPDEVVEALTELEDGEGEMEQAN 93
                9************************************************95222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       614  (0.0449093); expected 273.4 (0.02)
Passed bias filter:                      540  (0.0394968); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 649.01
//
Query:       MMETSP1325-20131115|9601_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 322.27
//
Query:       MMETSP1325-20131115|9602_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.5   2.1       0.13   12.4   1.4    1.1  1  PF09806.4 Cyclin-dependent kinase 2-associated protein


Domain annotation for each model (and alignments):
>> PF09806.4  Cyclin-dependent kinase 2-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.4   9.4e-06      0.13      56     122 ..       3      77 ..       1      92 [. 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 9.4e-06
   PF09806.4  56 sagssssnssalrarsskqssaaaaaaaekavaakldytkflqaqlklLq.........vvvttqnaaalvtpvts 122
                 s++ssss s + +++ss +ss a a a+ + v    ++  +   ql+ L+          + t++naaa ++ vt 
  MMETSP1325-20131115|9602_1   3 SPSSSSSSS-SSSSSSSPSSSGASARASSAPVPPNWKSLPYAVEQLTGLRclqafiplpEAPTAANAAAPHARVTD 77 
                 455555544.556666667778888888899999999999999999888877788888856666778888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|9600_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-05   23.4  11.8    3.1e-05   23.4   8.2    2.8  3  PF00628.24 PHD-finger


Domain annotation for each model (and alignments):
>> PF00628.24  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   8.2   2.3e-09   3.1e-05       2      46 ..     102     144 ..     101     146 .. 0.90
   2 ?    1.3   3.1     0.018   2.5e+02       2      24 ..     148     172 ..     147     179 .. 0.84
   3 ?   -2.5   0.5      0.29   3.9e+03      15      23 ..     204     213 ..     197     217 .. 0.69

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 2.3e-09
                 BTTTTCTCTTS-EEEBSSSSSEEETTTSSS-SSHHSHHST.TB-SC CS
  PF00628.24   2 CkiCgesdeegelvlCdgCkewfHlkClglkleseekpeg.ewlCe 46 
                 C +C +   +g+++lCd+C+ +fH++Clg+++ +e k  + +w C+
  MMETSP1325-20131115|9600_1 102 CLVCWD---GGKVMLCDRCPCAFHPACLGMSKAEEAKCASsQWSCP 144
                 889988...9*********************9988777668****8 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.018
                 BTTTTC..TCTTS-EEEBSSSSSEE CS
  PF00628.24   2 CkiCge..sdeegelvlCdgCkewf 24 
                 C +C++  +  +g +  C+ C++++
  MMETSP1325-20131115|9600_1 148 CLVCERkaQAVGGLIFRCECCPNAY 172
                 99***975555999999****9976 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 0.29
                 EEBS.SSSSE CS
  PF00628.24  15 vlCd.gCkew 23 
                 + C  +C +w
  MMETSP1325-20131115|9600_1 204 IHCSqSCMDW 213
                 6775247777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       713  (0.0521504); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 1595.87
//
Query:       MMETSP1325-20131115|9599_1  [L=415]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.38s 00:00:01.10 Elapsed: 00:00:00.77
# Mc/sec: 1291.54
//
Query:       MMETSP1325-20131115|9603_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   12.0   6.3       0.62   10.1   4.4    2.2  1  PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
       0.16   10.9   0.0       0.17   10.8   0.0    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.4     9e-05      0.62       2      21 ..      12      31 ..      11      42 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 9e-05
   PF10518.4  2 lsRRqfLkggaaaaAaaalg 21
                +sRR +L +g++ aA++a++
  MMETSP1325-20131115|9603_1 12 MSRREALAAGGGMAALVAAP 31
                8****************986 PP

>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   2.4e-05      0.17      80     144 ..      74     140 ..      28     163 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2.4e-05
                 HHHHHHHHBGGGGGCTTS-HHHHHH.HHHHHHHHHHHHHCCHHHHSTTS-.....-SCHHHHC-EEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
  PF00443.24  80 fkktlkkineqfsgykQqDahEfll.flLdqlhedlnrlnkkektekqkae.dsndslitdlfkgql 144
                 ++k++k+i+ ++++  Q D+  f++ f +d+l  dln +n+  +  +q    +    +i+d+ ++++
  MMETSP1325-20131115|9603_1  74 YLKAVKQIEAEMNKDPQADVRTFVQvFAFDKLRTDLNTVNSALDEDTQRGTdRLIRATIQDITEIET 140
                 899********************97478************999888877764446666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.42s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 865.62
//
Query:       MMETSP1325-20131115|9608_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-09   36.7   0.0    2.6e-09   36.5   0.0    1.1  1  PF02225.17 PA domain


Domain annotation for each model (and alignments):
>> PF02225.17  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   0.0   1.9e-13   2.6e-09      35      95 ..      20      79 ..       5      85 .. 0.79

  Alignments for each domain:
  == domain 1    score: 36.5 bits;  conditional E-value: 1.9e-13
  PF02225.17 35 kIvlvrrgvctfsekaevaqeaGAkgviiinpseaalpggtkvgpsdvgiPvvvisradge 95
                 Ivl rrg+ctf++k + + +aG+++++i+n +e ++      +++d ++ v ++ ++ g+
  MMETSP1325-20131115|9608_1 20 AIVLARRGTCTFGSKGKTVLAAGGAALVIVN-NEPGNMHAPGPDAHDLKLSVSMVAEDEGN 79
                69*****************************.44444445555556666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 426.99
//
Query:       MMETSP1325-20131115|9609_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-08   34.7   1.8    1.4e-08   34.3   1.3    1.2  1  PF03006.15 Haemolysin-III related


Domain annotation for each model (and alignments):
>> PF03006.15  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   1.3     1e-12   1.4e-08     107     221 ..       5     110 ..       1     111 [. 0.90

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 1e-12
  PF03006.15 107 gllylvliwilavlGilvkllpvfsrkefrvlravlfllmgllgvipilhlilileslgeaaalvllvlggvlyllGavfyatriPErlkpgkfdivghsHqifHvfVvlgallh 221
                 gl +++++w++++lG + +l ++   +  + + av+++++g l  +++  + ++l+  +    + ll+++   y+lGa+ ya++      p ++  v+ +H++fH+++ +++ + 
  MMETSP1325-20131115|9609_1   5 GLRLIISLWTATFLGSMHTLGLMPGGRGSQSFTAVIYVGVGGLCSLSFREMSVVLSRQE----SLLLAASLSQYFLGALAYAFK-----YPDPWPAVFGFHEVFHLLTCGASTCT 110
                 5667899*************999777778*********************999999777....9********************.....7777788889**********999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|9610_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 470.56
//
Query:       MMETSP1325-20131115|9605_1  [L=400]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.36s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 1808.57
//
Query:       MMETSP1325-20131115|9611_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       628  (0.0459333); expected 273.4 (0.02)
Passed bias filter:                      494  (0.0361322); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 610.84
//
Query:       MMETSP1325-20131115|9613_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|9612_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.006   16.5   5.4      0.009   15.9   3.7    1.3  1  PF11081.3 Protein of unknown function (DUF2890)
  ------ inclusion threshold ------
          2    6.4   4.6        2.4    6.1   3.2    1.0  1  PF08553.5 VID27 cytoplasmic protein


Domain annotation for each model (and alignments):
>> PF11081.3  Protein of unknown function (DUF2890)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   3.7   1.3e-06     0.009       5      60 ..      93     148 ..      90     202 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.3e-06
   PF11081.3   5 reskklkvelpptedeeEdwdsqaeevseeeeeledwedSldeedeeaeeveeeta 60 
                 +es k + ++pp+e++eE ++s    +se+e+e ed++d  +e+++++e ve + +
  MMETSP1325-20131115|9612_1  93 KESTKATRPPPPKEEQEEVLNSWEALLSEDEDEDEDEKDGAQEQEKQDEGVEAKPV 148
                 5667888889999999999998665777*********9999998777777766544 PP

>> PF08553.5  VID27 cytoplasmic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   3.2   0.00035       2.4     365     418 ..     104     157 ..      93     179 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00035
   PF08553.5 365 keeekdYildafealeiedeeeeeeaeeeeeeeeeeeedeeegeskeevddeey 418
                 ++ee++ +l++ eal +ede+e+e+++  ++e+e+++e  e+++  ++ +d+ +
  MMETSP1325-20131115|9612_1 104 PKEEQEEVLNSWEALLSEDEDEDEDEKDGAQEQEKQDEGVEAKPVGDRANDDGH 157
                 6899999999***99999998888999999999999998888888777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       591  (0.043227); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1088.35
//
Query:       MMETSP1325-20131115|9615_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.43s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 433.19
//
Query:       MMETSP1325-20131115|9616_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   14.9   0.1      0.025   14.8   0.0    1.2  1  PF04954.8 Siderophore-interacting protein
      0.031   13.2   0.2      0.038   12.9   0.1    1.3  1  PF03049.9 UL79 family


Domain annotation for each model (and alignments):
>> PF04954.8  Siderophore-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   3.7e-06     0.025      41     102 ..       4      62 ..       1      73 [. 0.84

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3.7e-06
   PF04954.8  41 elpleapagveltwlvregaaaagelllealrelalpagelyvwvagEasavkalRrhlvke 102
                 +l+l + ++++   + ++++ +  ell++a+++++   ++++v +++E+++++++R+ + ++
  MMETSP1325-20131115|9616_1   4 CLELLTLRECTTMEVFNNEE-KMVELLEQAVETHSS--ADPFVRLTCEQKTAQRVRNLVHNK 62 
                 56666777777777788888.89999999***9996..9******************99876 PP

>> PF03049.9  UL79 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   5.6e-06     0.038      88     135 ..      33      81 ..       2      87 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.6e-06
   PF03049.9  88 lkeagvsed..alfseekaaqlslkLnknrallkllselvlrelGlthav 135
                 +++++ ++    l++e+k aq + +L +n+ + + + ++v r lG+ ++v
  MMETSP1325-20131115|9616_1  33 VETHSSADPfvRLTCEQKTAQRVRNLVHNKVSEHFMHSYVARDLGI-QTV 81 
                 4444444448899*********************************.665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       597  (0.0436659); expected 273.4 (0.02)
Passed bias filter:                      483  (0.0353277); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 406.93
//
Query:       MMETSP1325-20131115|9617_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 309.53
//
Query:       MMETSP1325-20131115|9614_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.48
# Mc/sec: 1907.10
//
Query:       MMETSP1325-20131115|9622_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-06   25.8   0.0    1.1e-05   25.7   0.0    1.0  1  PF08241.7  Methyltransferase domain
    7.4e-05   22.2   0.1      8e-05   22.1   0.0    1.0  1  PF13847.1  Methyltransferase domain
     0.0035   17.5   0.1     0.0038   17.4   0.0    1.0  1  PF13649.1  Methyltransferase domain
  ------ inclusion threshold ------
      0.014   14.9   0.1      0.016   14.7   0.1    1.0  1  PF01227.17 GTP cyclohydrolase I
      0.017   15.6   0.0      0.017   15.5   0.0    1.0  1  PF12847.2  Methyltransferase domain
        0.1   12.9   0.0       0.12   12.7   0.0    1.0  1  PF08242.7  Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   4.7e-09   1.1e-05      20      66 ..       4      52 ..       2      57 .] 0.90

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 4.7e-09
   PF08241.7 20 arvtgvDlseemlatakerlkeegle.lvvadaeel.pfednsfDvvvs 66
                 ++tg+D s+  +a  ++r+++++ + + v+da+++  f++ns+Dvv+ 
  MMETSP1325-20131115|9622_1  4 TQITGIDKSQVIIAHLQHRYQHQEGMeFLVMDATSMsRFDSNSIDVVID 52
                689****************99988778*********9**********85 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   3.5e-08     8e-05      30      81 ..       5      54 ..       2      57 .] 0.86

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 3.5e-08
   PF13847.1 30 kvvGiDiseeaielAkeraqklgfenveFiqgdieeleklle.esfDlvisne 81
                +++GiD s+  i++ + r q  + e +eF + d++++++ +  +s+D+vi+++
  MMETSP1325-20131115|9622_1  5 QITGIDKSQVIIAHLQHRYQ--HQEGMEFLVMDATSMSR-FDsNSIDVVIDKA 54
                79***************755..55679*********997.5669******985 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.7e-06    0.0038      25      72 ..       4      51 ..       1      56 [. 0.89

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.7e-06
   PF13649.1 25 qrvigvDiseealelakerlsskglkvkfvqadaralp.feegefdlvv 72
                 +++g+D s+  +++ ++r++ ++  ++f+++da++++ f+++++d+v+
  MMETSP1325-20131115|9622_1  4 TQITGIDKSQVIIAHLQHRYQHQE-GMEFLVMDATSMSrFDSNSIDVVI 51
                689*****************7766.9**********9758888***997 PP

>> PF01227.17  GTP cyclohydrolase I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1     7e-06     0.016      15      67 ..       5      56 ..       3      57 .] 0.91

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7e-06
  PF01227.17 15 kvvglsklarvvevfarrlqvqErlteqIadal.eellkpkgvaVvieAeHlCm 67
                +++g+ k + ++   ++r+q qE +   ++da  ++  +++ + Vvi+    Cm
  MMETSP1325-20131115|9622_1  5 QITGIDKSQVIIAHLQHRYQHQEGMEFLVMDATsMSRFDSNSIDVVID--KACM 56
                789****************************9725679**********..9999 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.0   7.4e-06     0.017      25      78 ..       3      54 ..       1      57 [] 0.80

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 7.4e-06
   PF12847.2 25 gakvvgvDpseeslelarenaksldleeriellqgda.keelsller.fDavllkg 78
                  +++g+D+s+  ++ ++ +    + +e++e+l  da +    +  + +D+v++k 
  MMETSP1325-20131115|9622_1  3 FTQITGIDKSQVIIAHLQHRY---QHQEGMEFLVMDAtSMSRFDS-NsIDVVIDKA 54
                468******************...678**********43333333.2599999987 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   5.3e-05      0.12      21      72 ..       4      52 ..       2      56 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.3e-05
   PF08242.7 21 ieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvva 72
                 ++tg+D s+  i++ +++ +++e+  +  ++    + +d+   +s Dvv+ 
  MMETSP1325-20131115|9622_1  4 TQITGIDKSQVIIAHLQHRYQHQEGMEFLVMDATSMSRFDS---NSIDVVID 52
                689**********8888888888876655555555555544...59***985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 273.18
//
Query:       MMETSP1325-20131115|9620_1  [L=265]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 1322.99
//
Query:       MMETSP1325-20131115|9623_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0018   18.7   0.0     0.0035   17.8   0.0    1.5  1  PF12681.2 Glyoxalase-like domain
  ------ inclusion threshold ------
      0.077   12.9   0.1       0.14   12.0   0.0    1.5  2  PF13669.1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
        2.4    7.7   8.0         18    5.0   2.6    2.3  2  PF11636.3 Troponin I residues 1-32


Domain annotation for each model (and alignments):
>> PF12681.2  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   7.7e-07    0.0035       1      34 [.      77     111 ..      77     120 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 7.7e-07
   PF12681.2   1 lpvsdleaaraFYeklLGfevaeeegdfvtlsl.g 34 
                 +pv++leaa++FY ++LG+ +   ++++  +sl g
  MMETSP1325-20131115|9623_1  77 FPVHNLEAAKHFYGTVLGCAEGRSSTKWQDYSLhG 111
                 68******************999888887777644 PP

>> PF13669.1  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0         2   9.3e+03      25      37 ..      22      34 ..      20      42 .. 0.65
   2 ?   12.0   0.0   3.1e-05      0.14       2      33 ..      74     111 ..      73     120 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 2
                ESS--E.EETTTT CS
   PF13669.1 25 pweryrdepqnvd 37
                pw+++++ ++ v 
  MMETSP1325-20131115|9623_1 22 PWYDWPVSTAAVA 34
                6777777666554 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 3.1e-05
                 EE-EE-S-HHHHHHHHHH.---......EESS--E.EE CS
   PF13669.1   2 qvgivVpDleaavaefskllGv......gpweryrdep 33 
                 + ++ V++leaa  +++++lG+      ++w++y   +
  MMETSP1325-20131115|9623_1  74 HHAFPVHNLEAAKHFYGTVLGCaegrssTKWQDYSLHG 111
                 88999****************85544445788887655 PP

>> PF11636.3  Troponin I residues 1-32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   2.6    0.0039        18       7      28 ..      32      51 ..      29      53 .. 0.75
   2 ?    4.6   0.1    0.0049        23       3      16 ..      58      72 ..      56      79 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0039
   PF11636.3  7 vvpepPkPpPvvaPPllRRkSS 28
                +v  + +P P   P + RR SS
  MMETSP1325-20131115|9623_1 32 AVAARKAPTP--TPAPARRMSS 51
                5666667777..77889***99 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0049
   PF11636.3  3 eeeevvpepPkP.pP 16
                 e++v +  P+P  P
  MMETSP1325-20131115|9623_1 58 GEDAVLDTAPAPgSP 72
                589999******766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 609.07
//
Query:       MMETSP1325-20131115|9619_1  [L=292]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.34s 00:00:00.96 Elapsed: 00:00:00.49
# Mc/sec: 1428.03
//
Query:       MMETSP1325-20131115|9624_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-08   32.7   0.1    0.00085   18.9   0.0    1.6  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.089   12.7   0.0        4.4    7.6   0.0    2.7  3  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   2.4e-07    0.0017       6      61 .]      46     101 ..      45     101 .. 0.91
   2 !   18.9   0.0   1.2e-07   0.00085       7      49 ..      71     113 ..      68     117 .] 0.91

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 2.4e-07
   PF13855.1   6 LdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61 
                 L++s    + +++ga++g +      L++n+l+ ++ ++f+gL + r + L++Nrl
  MMETSP1325-20131115|9624_1  46 LWISERGVTALEKGALEGNEGAAAVFLHSNELEALPLGVFDGLMNPRAIRLEHNRL 101
                 56664447899*******************************************98 PP

  == domain 2    score: 18.9 bits;  conditional E-value: 1.2e-07
   PF13855.1   7 dLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLp 49 
                  L +N+l+ +p g+F gl n + + L +n+l++++ ++f+   
  MMETSP1325-20131115|9624_1  71 FLHSNELEALPLGVFDGLMNPRAIRLEHNRLTTLPYGIFDEIS 113
                 6999**********************************99765 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         2   1.4e+04       7      13 ..      32      38 ..      32      43 .. 0.65
   2 ?    2.3   0.0     0.035   2.4e+02       7      22 .]      72      88 ..      70      88 .. 0.87
   3 ?    7.6   0.0   0.00064       4.4       5      19 ..      94     109 ..      90     112 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 2
                ETSSBCB CS
  PF00560.28  7 LsgNnlt 13
                L g+++ 
  MMETSP1325-20131115|9624_1 32 LKGCPFH 38
                5678765 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.035
                ETSSBCBCHHHH.HHHH CS
  PF00560.28  7 LsgNnltslpps.lsnL 22
                L +N l+ lp + + +L
  MMETSP1325-20131115|9624_1 72 LHSNELEALPLGvFDGL 88
                889*******9999876 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.00064
                 EEETSSBCBCHHHH.H CS
  PF00560.28   5 LdLsgNnltslpps.l 19 
                 + L +N+lt+lp + +
  MMETSP1325-20131115|9624_1  94 IRLEHNRLTTLPYGiF 109
                 789*********9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 500.67
//
Query:       MMETSP1325-20131115|9618_1  [L=558]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-07   30.8   6.7    5.6e-07   29.1   4.6    1.9  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   4.6   4.1e-11   5.6e-07       5      31 .]     388     413 ..     384     413 .. 0.88

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 4.1e-11
                 EEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   5 WeersddddGrvYYyNheTgetqWekP 31 
                 W+ ++++d Gr+YY+N+ T et+W++P
  MMETSP1325-20131115|9618_1 388 WVPVTTED-GRTYYHNTDTDETSWTHP 413
                 99667678.*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.51
# Mc/sec: 2621.90
//
Query:       MMETSP1325-20131115|9625_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.7   1.2       0.43   10.1   0.1    2.2  2  PF11427.3 Tc3 transposase


Domain annotation for each model (and alignments):
>> PF11427.3  Tc3 transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   3.2e-05      0.43      32      46 ..       2      16 ..       1      18 [. 0.93
   2 ?    3.1   0.1    0.0048        66      31      38 ..      35      42 ..      22      50 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 3.2e-05
                --HHHHHHHHH-STT CS
   PF11427.3 32 RsRnCIrryLKdPvk 46
                R R+C+  +L  Pvk
  MMETSP1325-20131115|9625_1  2 RARHCLVPFLTGPVK 16
                99***********98 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.0048
                T--HHHHH CS
   PF11427.3 31 sRsRnCIr 38
                 R R+C+ 
  MMETSP1325-20131115|9625_1 35 ERARHCLV 42
                599***75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 244.33
//
Query:       MMETSP1325-20131115|9626_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 230.24
//
Query:       MMETSP1325-20131115|9628_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.44s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 624.93
//
Query:       MMETSP1325-20131115|9627_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.47s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 643.47
//
Query:       MMETSP1325-20131115|9630_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.46s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 372.77
//
Query:       MMETSP1325-20131115|9631_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-14   54.0  64.4    2.5e-06   27.4   3.3    6.0  6  PF07974.8  EGF-like domain
    0.00032   20.4  42.0      0.014   15.2   4.7    5.9  5  PF00008.22 EGF-like domain
      0.009   15.8  46.0       0.48   10.2   8.9    4.7  4  PF00053.19 Laminin EGF-like (Domains III and V)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   8.4   3.5e-08   0.00016       1      32 []      14      48 ..      14      48 .. 0.93
   2 !   27.4   3.3   5.4e-10   2.5e-06       7      32 .]      75     100 ..      69     100 .. 0.93
   3 ?    3.9   3.9     0.012        54       5      14 ..     110     119 ..     105     121 .. 0.78
   4 !    7.8   2.3    0.0007       3.2      21      32 .]     158     169 ..     154     169 .. 0.96
   5 !   21.2   1.9   4.5e-08   0.00021       5      29 ..     318     342 ..     315     344 .. 0.86
   6 ?   -2.7   0.1       1.4   6.3e+03      25      30 ..     355     360 ..     354     361 .. 0.74

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 3.5e-08
   PF07974.8  1 Csad.gliCgghGtCvkq....cgkCvCdsgyqGktC 32
                C+ d    C++hG C+++    + +C+C++gyqG +C
  MMETSP1325-20131115|9631_1 14 CPGDvA--CSAHGVCDDNdddaTYRCSCSDGYQGGDC 48
                887744..***************************99 PP

  == domain 2    score: 27.4 bits;  conditional E-value: 5.4e-10
   PF07974.8   7 iCgghGtCvkqcgkCvCdsgyqGktC 32 
                 +C+++GtC++++g C+C + y+G+ C
  MMETSP1325-20131115|9631_1  75 ECSNGGTCDRSTGACSCADAYFGAAC 100
                 6************************* PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.012
   PF07974.8   5 gliCgghGtC 14 
                 ++ C+ghG+C
  MMETSP1325-20131115|9631_1 110 TNACNGHGQC 119
                 367******* PP

  == domain 4    score: 7.8 bits;  conditional E-value: 0.0007
   PF07974.8  21 CvCdsgyqGktC 32 
                 C+Cd g++G +C
  MMETSP1325-20131115|9631_1 158 CKCDTGWTGYDC 169
                 ***********9 PP

  == domain 5    score: 21.2 bits;  conditional E-value: 4.5e-08
   PF07974.8   5 gliCgghGtCvkqcgkCvCdsgyqG 29 
                 ++ C+++G C++ +g+C C  gy+ 
  MMETSP1325-20131115|9631_1 318 NEPCSNRGLCDRATGICTCFTGYYS 342
                 567********99*********986 PP

  == domain 6    score: -2.7 bits;  conditional E-value: 1.4
   PF07974.8  25 sgyqGk 30 
                 +gyqG+
  MMETSP1325-20131115|9631_1 355 CGYQGP 360
                 789997 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   4.7   3.1e-06     0.014       6      30 ..      20      45 ..      14      47 .. 0.91
   2 !    8.9   1.2   0.00029       1.3       5      27 ..      75      94 ..      70      98 .. 0.79
   3 ?    3.5   0.2     0.014        64       6      14 ..     113     121 ..     109     126 .. 0.84
   4 ?    2.0   1.0     0.041   1.9e+02      22      30 ..     158     166 ..     156     167 .. 0.95
   5 !   11.1   2.5   5.8e-05      0.27       3      28 ..     317     340 ..     316     345 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 3.1e-06
                CSS--EEEEEC.CTEEEEE--TTCTT CS
  PF00008.22  6 CsngGtCvdtp.gggytCeCpeGytG 30
                Cs +G C d + + +y+C C  Gy+G
  MMETSP1325-20131115|9631_1 20 CSAHGVCDDNDdDATYRCSCSDGYQG 45
                *************************9 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00029
                TCSS--EEEEECCTEEEEE--TT CS
  PF00008.22  5 pCsngGtCvdtpgggytCeCpeG 27
                 CsngGtC ++      C C+  
  MMETSP1325-20131115|9631_1 75 ECSNGGTCDRST---GACSCADA 94
                6*******9985...88888765 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.014
                 CSS--EEEE CS
  PF00008.22   6 CsngGtCvd 14 
                 C+++G+C++
  MMETSP1325-20131115|9631_1 113 CNGHGQCMS 121
                 *******86 PP

  == domain 4    score: 2.0 bits;  conditional E-value: 0.041
                 EE--TTCTT CS
  PF00008.22  22 CeCpeGytG 30 
                 C+C  G+tG
  MMETSP1325-20131115|9631_1 158 CKCDTGWTG 166
                 ********9 PP

  == domain 5    score: 11.1 bits;  conditional E-value: 5.8e-05
                 TT.TCSS--EEEEECCTEEEEE--TTC CS
  PF00008.22   3 pn.pCsngGtCvdtpgggytCeCpeGy 28 
                 +n pCsn+G C +      +C+C  Gy
  MMETSP1325-20131115|9631_1 317 ENePCSNRGLCDRAT---GICTCFTGY 340
                 678********9996...9****9996 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   5.5    0.0002      0.89       3      33 ..      20      50 ..      13      61 .. 0.78
   2 !   10.2   8.9   0.00011      0.48       3      40 ..      76     111 ..      74     119 .. 0.74
   3 ?    1.0   4.3     0.082   3.8e+02      18      33 ..     156     171 ..     111     185 .. 0.75
   4 !    7.0   1.0    0.0011       4.9       3      26 ..     321     340 ..     318     344 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0002
                STT-B-CC--B-S....----BSBSTTEE---S-E CS
  PF00053.19  3 CnphgsssssCds....stgqClCkenveGrkCdr 33
                C+ hg     Cd      t++C+C ++++G +C +
  MMETSP1325-20131115|9631_1 20 CSAHG----VCDDndddATYRCSCSDGYQGGDCAQ 50
                55555....78877888****************75 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00011
                 STT-B-CC--B-S----BSBSTTEE---S-..EE----B- CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenveGrkCd..rCkpgyyg 40 
                 C++     ++Cd+stg+C+C + + G  Cd   C  g+ +
  MMETSP1325-20131115|9631_1  76 CSNG----GTCDRSTGACSCADAYFGAACDymMCGGGTTN 111
                 4444....5********************94446666655 PP

  == domain 3    score: 1.0 bits;  conditional E-value: 0.082
                 --BSBSTTEE---S-E CS
  PF00053.19  18 gqClCkenveGrkCdr 33 
                   C+C  + +G +C +
  MMETSP1325-20131115|9631_1 156 FGCKCDTGWTGYDCSE 171
                 57************86 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.0011
                 STT-B-CC--B-S----BSBSTTE CS
  PF00053.19   3 CnphgsssssCdsstgqClCkenv 26 
                 C+++g     Cd+ tg C C  ++
  MMETSP1325-20131115|9631_1 321 CSNRG----LCDRATGICTCFTGY 340
                 44444....9**********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.47s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1719.74
//
Query:       MMETSP1325-20131115|9632_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|9629_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-05   21.7   0.0    6.4e-05   21.7   0.0    1.0  1  PF00248.16 Aldo/keto reductase family
    0.00021   20.9   0.1     0.0091   15.7   0.0    2.5  3  PF01402.16 Ribbon-helix-helix protein, copG family


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   9.3e-09   6.4e-05     216     282 ..      23      90 ..       2      91 .. 0.86

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 9.3e-09
  PF00248.16 216 daleelselakehgvslaqlalryalsrpavgsvipgassieqleenlkalel.elseeeiaeidell 282
                 +  ++l+++a+ +gvs  +l+l+ + ++ ++++ i ga++ie+++e +++  + +++ +e++ id + 
  MMETSP1325-20131115|9629_1  23 EDFPRLNKMAEAKGVSTHALVLAALRHKWPNIIHIAGARKIEHVREMAEVVPTvRFTRSELELIDGIK 90 
                 556899********************99***********************888**********9886 PP

>> PF01402.16  Ribbon-helix-helix protein, copG family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.3e-06    0.0091      13      36 ..      27      50 ..      23      50 .. 0.94
   2 ?   -2.8   0.0      0.91   6.3e+03      28      33 ..      65      70 ..      63      71 .. 0.49
   3 ?    2.7   0.0     0.017   1.1e+02       2      15 ..      74      87 ..      73      92 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.3e-06
                HHHHHHHH---SHHHHHHHHHHHH CS
  PF01402.16 13 rLdelAkkrGlSrSeliReAlrey 36
                rL+++A++ G+S ++l+ +Alr++
  MMETSP1325-20131115|9629_1 27 RLNKMAEAKGVSTHALVLAALRHK 50
                8********************985 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.91
                HHHHHH CS
  PF01402.16 28 liReAl 33
                ++Re++
  MMETSP1325-20131115|9629_1 65 HVREMA 70
                455544 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.017
                EEEEEEHHHHHHHH CS
  PF01402.16  2 vtirldeellerLd 15
                 t+r+++ +le +d
  MMETSP1325-20131115|9629_1 74 PTVRFTRSELELID 87
                59*********999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 474.17
//
Query:       MMETSP1325-20131115|9633_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   13.9   8.4      0.043   13.4   5.8    1.3  1  PF13639.1  Ring finger domain
       0.05   13.3  10.5       0.08   12.6   7.3    1.4  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
      0.074   11.6   6.0      0.083   11.4   4.1    1.1  1  PF10272.4  Putative transmembrane protein precursor
       0.31   10.7   0.2       0.31   10.7   0.1    3.2  2  PF12760.2  Transposase zinc-ribbon domain
        0.5   10.4   9.3        4.9    7.2   6.6    1.9  2  PF05495.7  CHY zinc finger
        4.6    6.8  10.2        4.5    6.9   1.4    2.1  2  PF01155.14 Hydrogenase expression/synthesis hypA family
        6.1    6.4  11.5         19    4.9   3.8    3.0  2  PF04438.11 HIT zinc finger
        7.8    6.1  14.7         64    3.2  10.2    2.3  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
        8.6    5.9  10.8         37    3.9   7.5    2.0  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   5.8   2.8e-05     0.043       2      45 ..      41      96 ..      40      97 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.8e-05
   PF13639.1  2 eCaiCldelse...geevvrlpCgHvfHeeCldewlrssn.........sCPlCrk 45
                +C++C ++ ++   g+++ r++   + ++eC+ ++ +ss+          CPlC++
  MMETSP1325-20131115|9633_1 41 TCVVCDSPWERynaGQKCERCKMEVLVCKECMVKHKTSSKkstfppgkvVCPLCKA 96
                7********88555555555555688*********98875678899999*****96 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   7.3   5.3e-05      0.08       4      45 ..      41      95 ..      38      96 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.3e-05
   PF13923.1  4 sCpiCleelen....pviltpCg.Hl.yCkkCieqwlekskkk........CPiCr 45
                +C++C + +e        + +C   + +Ck+C+ ++ ++skk+        CP+C+
  MMETSP1325-20131115|9633_1 41 TCVVCDSPWERynagQ-KCERCKmEVlVCKECMVKHKTSSKKStfppgkvvCPLCK 95
                8********9977763.35677545559********999733355555566****8 PP

>> PF10272.4  Putative transmembrane protein precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   4.1   5.5e-05     0.083     290     349 ..      42      97 ..      21     101 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.5e-05
   PF10272.4 290 CldedeegvvlkeeeeCqnCyCRPlWClsClakwFasrqdqveretwlsskvtCPtcrak 349
                 C   d+     +  ++C++C+   l C +C+ k     ++++++ t+  +kv CP c+a+
  MMETSP1325-20131115|9633_1  42 CVVCDSPWERYNAGQKCERCKMEVLVCKECMVKH----KTSSKKSTFPPGKVVCPLCKAN 97 
                 444444444467889****************885....6778999************986 PP

>> PF12760.2  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   5.6       2.8   4.3e+03      14      26 ..      51      63 ..      27      85 .. 0.81
   2 ?   10.7   0.1    0.0002      0.31      17      35 ..      86     105 ..      79     111 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2.8
   PF12760.2 14 rWpngfvCphCgs 26
                r++ g++C +C+ 
  MMETSP1325-20131115|9633_1 51 RYNAGQKCERCKM 63
                5666777777765 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.0002
   PF12760.2  17 ng.fvCphCgsreayriktr 35 
                  g +vCp C+ ++ y++++ 
  MMETSP1325-20131115|9633_1  86 PGkVVCPLCKANKRYDFRRH 105
                 45499*******99999884 PP

>> PF05495.7  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   1.1     0.017        26      32      69 ..      31      63 ..      22      65 .. 0.69
   2 ?    7.2   6.6    0.0032       4.9      31      69 ..      55      96 ..      40      98 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.017
   PF05495.7 32 HeleranvkevlCgkCkkeqtvkeykceakekCskCkl 69
                H  e+ +     C +C+  ++   y+++  +kC+ Ck+
  MMETSP1325-20131115|9633_1 31 HGAEESE-IISTCVVCDSPWER--YNAG--QKCERCKM 63
                5555555.34579999998877..4455..88999986 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0032
   PF05495.7 31 dHeleranvkevlCgkCkkeqtvkeykce...akekCskCkl 69
                  ++er +++ ++C++C  + +++++k++   +k  C+ Ck+
  MMETSP1325-20131115|9633_1 55 GQKCERCKMEVLVCKECMVKHKTSSKKSTfppGKVVCPLCKA 96
                6789999999********999998887778999*******97 PP

>> PF01155.14  Hydrogenase expression/synthesis hypA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   1.4    0.0029       4.5      65      94 ..      34      63 ..      32      66 .. 0.87
   2 ?    5.4   0.7    0.0085        13      71      96 ..      66      98 ..      63     103 .. 0.83

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0029
                -----EEE-SSSS-EE-S--S----SSSSS CS
  PF01155.14 65 eevpvsvrCreCgeeveleeraleCpkCgs 94
                ee ++  +C +C++ +e  +  ++C++C+ 
  MMETSP1325-20131115|9633_1 34 EESEIISTCVVCDSPWERYNAGQKCERCKM 63
                56677789********************86 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0085
                EE-SSSS-EE-S--S---.......-SSSSS-- CS
  PF01155.14 71 vrCreCgeeveleerale.......CpkCgsad 96
                + C+eC  + ++++++ +       Cp C++++
  MMETSP1325-20131115|9633_1 66 LVCKECMVKHKTSSKKSTfppgkvvCPLCKANK 98
                68****9999999988666789999****9875 PP

>> PF04438.11  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   3.8     0.012        19       4      22 ..      41      64 ..      40      71 .. 0.83
   2 ?    3.7   0.3     0.029        44      11      21 ..      86      96 ..      83     100 .. 0.71

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.012
  PF04438.11  4 lCgvCgf.pakY....kCpkCntr 22
                 C+vC   + +Y    kC +C++ 
  MMETSP1325-20131115|9633_1 41 TCVVCDSpWERYnagqKCERCKME 64
                6***********666679999875 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.029
  PF04438.11 11 pakYkCpkCnt 21
                p+k  Cp C++
  MMETSP1325-20131115|9633_1 86 PGKVVCPLCKA 96
                77888888875 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2  10.2     0.042        64       3      47 ..      40      98 ..      35     100 .. 0.76

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.042
   PF13920.1  3 ktCvvCler....eadvlllpCg.HlclCeeCaerllk.........rkkkCpiCrspi 47
                +tCvvC +     +a   + +C+  + +C+eC+ + +           k  Cp+C+++ 
  MMETSP1325-20131115|9633_1 40 STCVVCDSPweryNAGQKCERCKmEVLVCKECMVKHKTsskkstfppGKVVCPLCKANK 98
                58****9954222223444566435679********779****************9875 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   7.5     0.024        37       1      41 []      42      94 ..      42      94 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.024
                -TTTSSS-SSEE....BSCTS-E..E-CHHHHHHHCS.......T-----TTT CS
  PF00097.20  1 CpiCleeakepn...elleCkHs..fCskCirkilks.......rkkvkCPlC 41
                C +C + ++  n   +   Ck +  +C++C++k+  s        +kv CPlC
  MMETSP1325-20131115|9633_1 42 CVVCDSPWERYNagqKCERCKMEvlVCKECMVKHKTSskkstfpPGKVVCPLC 94
                88999999998888888888887779********999898888888888**** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       610  (0.0446167); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 492.11
//
Query:       MMETSP1325-20131115|9635_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 261.03
//
Query:       MMETSP1325-20131115|9636_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.031   13.9   0.0      0.035   13.7   0.0    1.2  1  PF08074.6 CHDCT2 (NUC038) domain


Domain annotation for each model (and alignments):
>> PF08074.6  CHDCT2 (NUC038) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.5e-06     0.035      76     121 ..      26      71 ..       8      77 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.5e-06
   PF08074.6  76 lrraaklnlkqdpdhpamalaarfaeleclaeshqhlskeslagnk 121
                 + r + +   ++  + a+ l+++fael +++   ++++k+s +g +
  MMETSP1325-20131115|9636_1  26 IARPSWMHDLLEKVERAGDLNQKFAELMNITGEIVQIAKDSPEGVR 71 
                 55566666666777789************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       517  (0.0378145); expected 273.4 (0.02)
Passed bias filter:                      481  (0.0351814); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 339.85
//
Query:       MMETSP1325-20131115|9637_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0096   15.2   0.0       0.01   15.1   0.0    1.1  1  PF03473.12 MOSC domain
  ------ inclusion threshold ------
      0.032   13.9   0.0      0.035   13.8   0.0    1.1  1  PF10627.4  Curli assembly protein CsgE
      0.098   12.1   0.0       0.11   11.9   0.0    1.1  1  PF04126.8  Cyclophilin-like
        0.1   12.6   0.3       0.17   11.8   0.2    1.5  1  PF03144.20 Elongation factor Tu domain 2


Domain annotation for each model (and alignments):
>> PF03473.12  MOSC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     3e-06      0.01      88     133 .]       9      48 ..       2      48 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3e-06
                 HHHHCHCCH.........HHHHHH------EEEEEE---EETTSEEEE CS
  PF03473.12  88 tvdqetgardpe..gkvlfgrklsagirgivarvekpGtirvGdevev 133
                 +++ +  a++p+  ++v fg+++++        v+++Gt+rvGd ++v
  MMETSP1325-20131115|9637_1   9 GKQLGLTAVNPKwrDEVFFGQNVVT--------VKESGTVRVGDRITV 48 
                 4445555555557788999999999........************986 PP

>> PF10627.4  Curli assembly protein CsgE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0     1e-05     0.035      24      58 ..      19      53 ..       5      55 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1e-05
   PF10627.4 24 skwrdisltekfnltikErvtaraGslitvevnrk 58
                 kwrd  +  +  +t+kE  t r G  itv+ +++
  MMETSP1325-20131115|9637_1 19 PKWRDEVFFGQNVVTVKESGTVRVGDRITVLRKQQ 53
                58****************************98886 PP

>> PF04126.8  Cyclophilin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.3e-05      0.11      27      62 ..      10      42 ..       4      49 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.3e-05
                HT-SEEEE-EE---EEEE--S-----SS--B----- CS
   PF04126.8 27 ealPiesrvntWgdEiYfstpvklekeenakevvea 62
                ++l +++   +W+dE++f  +v +  +e+ +  v +
  MMETSP1325-20131115|9637_1 10 KQLGLTAVNPKWRDEVFFGQNVVTV-KESGT--VRV 42
                6788899999***********9888.44444..455 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2     5e-05      0.17       9      26 ..      36      51 ..      28      55 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 5e-05
                EE--EETTEEEEEETTTC CS
  PF03144.20  9 ysGtlkkGdtvrilgndt 26
                +sGt+++Gd++ +  +++
  MMETSP1325-20131115|9637_1 36 ESGTVRVGDRITV--LRK 51
                79***********..543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 248.35
//
Query:       MMETSP1325-20131115|9638_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.72
# Mc/sec: 362.78
//
Query:       MMETSP1325-20131115|9642_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|9639_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-33  115.3  11.9    2.6e-33  115.0   8.3    1.1  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
        3.3    7.6   0.0        3.3    7.6   0.0    2.8  2  PF02466.14 Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.0   8.3   3.7e-37   2.6e-33     169     375 ..       3     200 ..       1     219 [. 0.88

  Alignments for each domain:
  == domain 1    score: 115.0 bits;  conditional E-value: 3.7e-37
                 ----------...--S--GSBHHHHH---HHHH--------------SHHHHH.HHHHHHHHHHHHH-------TTT-.-------------------.TTT------------------------C...HHHHHHTS-HTTGG-----------------TTSTT-------------..-HHHHHHHHHHHHHHH---TTT---HHHHHH CS
  PF00909.16 169 lvlgkregrfegkeeaikghnlpfavlGtllLwfgWfgFNagsaltankrararaavtTllAaaagaltallisrlke.gkinvlglanGilAGlVAi.TaacavvepwgAliiGlvAgvlsvlgvk...klkeklkidDsldvvavHgvgGiwGllavgifaaekvvaskisggllsgegkqlvvqligilvilayafvvtlilllllkll 375
                  vlgk+ ++    +ea+ + ++ +a++Gtl++w++W++FN+g   + +++++  a+ +T+++++++++++ ++s + + g i+v+++++++lAG+VAi   a+  + p  Al+ Gl Ag+++ +g++      ek++++D+++v+++Hg+++i+G+l++ ++           ++  +g   + ++ql+g+ ++l++++  +li +++lk++
  MMETSP1325-20131115|9639_1   3 AVLGKKSDMS---KEASSTTSDVMALIGTLIMWVYWPSFNSGLISNGSAESEL-AITNTMTSLIGSTVMTFALSAMFNgGVISVVDVQSATLAGGVAIgAVANLKIGPAVALATGLGAGFFACIGHTyvwHALEKAGVHDTCGVHNLHGLPSIVGGLVSVFIPLAI-------SDSDKG---NPGYQLAGMGMTLVVSIFSGLITGVVLKQF 200
                 5899999877...89*****************************999999999.*****************9999999456*****************77788899*********************9887899**********************9876554432.......122233...458999999999999999999999988876 PP

>> PF02466.14  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   6.9         2   1.3e+04      87     119 ..      89     121 ..      52     129 .. 0.79
   2 ?    7.6   0.0   0.00048       3.3      85     114 ..     184     213 ..     179     216 .. 0.89

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 2
  PF02466.14  87 svaAGaltGavlarrggpqaaavgaagfaafsa 119
                 ++a+G++ Gav  ++ gp  a+  ++g ++f+ 
  MMETSP1325-20131115|9639_1  89 TLAGGVAIGAVANLKIGPAVALATGLGAGFFAC 121
                 789999************999999999888875 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.00048
  PF02466.14  85 lnsvaAGaltGavlarrggpqaaavgaagf 114
                 + s+++G++tG+vl++ +   ++av +a f
  MMETSP1325-20131115|9639_1 184 VVSIFSGLITGVVLKQFKDEAPMAVDSAYF 213
                 5689**************999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       548  (0.0400819); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.37s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 1495.50
//
Query:       MMETSP1325-20131115|9644_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00034   20.7   0.4    0.00055   20.0   0.3    1.3  1  PF00264.15 Common central domain of tyrosinase


Domain annotation for each model (and alignments):
>> PF00264.15  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.3     4e-08   0.00055     192     218 ..      16      41 ..       7      42 .. 0.84

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 4e-08
                 -----TTGGGGSTHHHHHHHHHHHHHH CS
  PF00264.15 192 GhmgdvavaafDPiFflHHaniDrlwa 218
                 G+m   a++++D  F++ H+ +Drlw+
  MMETSP1325-20131115|9644_1  16 GDM-FQATSSNDITFWVLHGTVDRLWH 41 
                 566.6789******************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 327.92
//
Query:       MMETSP1325-20131115|9644_2  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.054   12.3   0.2      0.059   12.1   0.2    1.0  1  PF06406.6 StbA protein


Domain annotation for each model (and alignments):
>> PF06406.6  StbA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   4.3e-06     0.059     253     302 ..       3      54 ..       1      60 [. 0.75

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.3e-06
                 HHHHHHHHHHHHHHHTT-----EEEEE----T..TTHHHHHHHHT--GGGEE CS
   PF06406.6 253 neavkkLkerviralsefsevtrvmvvGGGae..liaeaikkatevsdekvi 302
                 ++  ++L+ r + a++++  v+r++vv GGae  ++ +a++ a++++++ vi
  MMETSP1325-20131115|9644_2   3 EDVLERLEVRRVVAVTRVVRVPRLVVVVGGAEalVVPKAVHGAVQHPERDVI 54 
                 55677888888899*********55555555432456899999999988877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 381.46
//
Query:       MMETSP1325-20131115|9647_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 785.19
//
Query:       MMETSP1325-20131115|9641_1  [L=548]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-16   58.0   0.0    9.8e-16   57.6   0.0    1.2  1  PF00102.22 Protein-tyrosine phosphatase
     0.0017   17.8   0.0     0.0036   16.7   0.0    1.5  1  PF00782.15 Dual specificity phosphatase, catalytic domain
  ------ inclusion threshold ------
      0.057   13.5   0.0       0.11   12.6   0.0    1.4  1  PF13350.1  Tyrosine phosphatase family


Domain annotation for each model (and alignments):
>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.0   2.1e-19   9.8e-16     118     234 ..       4     138 ..       1     140 [. 0.83

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 2.1e-19
                 EEEEEEEETTTT....EEEEEEEEEEES--TTSCGSGSHHHHHHHHHHHHHS.STTSS-EEEES------HHHHHHHHHHHHHHHH...T--..TBEHHH.........HHHHHHTTS.TTSS-SHHHHHHHHHHH CS
  PF00102.22 118 lrklelkkkkeek...ekrtvkqlhytnWpdhgvpespkslldlirkvrksk.taksgpvvVhCsaGvgRtgtfvaldilleqlea...eee..kvdvlq.........ivkelRkqR.pgmvqsleqYiflyeai 234
                  r+++++  +++k      tv+q+h+t+Wp+ gv ++++++  l+r v+ ++ ++ + pv+VhCs GvgR+g+f+a+  +++ l     +    ++d            +v++lR+qR p +v+  eqY++   ++
  MMETSP1325-20131115|9641_1   4 RRDFRVSRAAPPKcydGATTVRQWHFTGWPNYGVTQDTDEVRLLLRLVEARQnEQPDRPVLVHCSGGVGRSGSFMAALSAVRALCPlaeG-YggETDAAAvppaltlrpAVEQLRTQRhPWCVEGIEQYKMATLVV 138
                 577777776666666545789****************99999999998888877899***********************9999986541.256677777888999999******99956899******9987766 PP

>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   7.8e-07    0.0036      70      93 ..      57      80 ..      35      81 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 7.8e-07
                CC----EEEE-----HHHHHHHHH CS
  PF00782.15 70 eqkgkkvlVHCqaGisRSatliia 93
                eq  + vlVHC  G+ RS+++++a
  MMETSP1325-20131115|9641_1 57 EQPDRPVLVHCSGGVGRSGSFMAA 80
                666789**************9987 PP

>> PF13350.1  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.4e-05      0.11     110     145 ..      41      81 ..      28      86 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.4e-05
   PF13350.1 110 kkayravlealae...ee..gpvlfHCtaGKDRTGvvaall 145
                 ++++r +l+++ +   e+  +pvl+HC+ G  R G ++a l
  MMETSP1325-20131115|9641_1  41 TDEVRLLLRLVEArqnEQpdRPVLVHCSGGVGRSGSFMAAL 81 
                 555555555555422222336**************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.37s 00:00:01.18 Elapsed: 00:00:00.56
# Mc/sec: 2345.01
//
Query:       MMETSP1325-20131115|9643_1  [L=442]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-23   81.1   0.0    3.2e-16   59.4   0.0    2.4  2  PF02146.12 Sir2 family
    1.4e-11   43.8   4.6    1.8e-08   33.9   0.7    2.5  2  PF00397.21 WW domain
     0.0036   16.6   0.1     0.0076   15.6   0.0    1.6  1  PF01011.16 PQQ enzyme repeat


Domain annotation for each model (and alignments):
>> PF02146.12  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   9.1e-08   0.00041       1      31 [.      85     114 ..      85     122 .. 0.87
   2 !   59.4   0.0     7e-20   3.2e-16      58     181 .]     119     246 ..     113     246 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 9.1e-08
                 -----TT-------.-----TTTS-HHHHTC CS
  PF02146.12   1 GAGiStesGipdfRskkeGlyaklakeelas 31 
                 GAG+St++Gi d+R   +G++++la+  +++
  MMETSP1325-20131115|9643_1  85 GAGVSTSTGIGDYRG-PKGVWTNLAEGIIPD 114
                 9*************5.*******99876655 PP

  == domain 2    score: 59.4 bits;  conditional E-value: 7e-20
                 T..S---HHHHHHHHHHH---EEEEEE--SS-HHHH----...SEEE----TTEEEETTTS-EEEECCGGTCCCHH--.B-ST---BEEESS--B-----.HHHHHHHHHHHH-SEEEE----S-STT CS
  PF02146.12  58 kaeakpnaaHkflkklekkgkllrliTQNidnLekkaGsk...kvvelHGslakakcvkCeakesgeelkeeieaekveecekcgkllkpdvvfFGealp.eklkkllekveeadlllviGtSlkVap 181
                  + a p+ +H ++k l ++g  + +   N+d+L+ k+G++   k+ elHG+++  +cv+C+a+  +    +++ ++ + + ++cg+      + FG++lp ++l  + ++++   + lv+GtSl+V+p
  MMETSP1325-20131115|9643_1 119 YSAARPSYTHMAIKRLVDEGLCTGVTSTNLDGLHMKSGLRpmeKLAELHGNMFAERCVRCKAEAYRAFPIQRTLKRFTGRYCDCGGNFMDSGIDFGQNLPlRHLALAEKHANAQTVSLVLGTSLRVRP 246
                 45789*********************************99999******************9988877666666666666666766555555679*****77777777789999999*********98 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.7   3.9e-12   1.8e-08       5      31 .]     331     356 ..     328     356 .. 0.89
   2 !   11.0   0.1     6e-05      0.27       1      20 [.     370     389 ..     370     392 .. 0.79

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 3.9e-12
                 EEE.E.E----EEEEETTT--EESS-- CS
  PF00397.21   5 WeersddddGrvYYyNheTgetqWekP 31 
                 W e++++d Grv++y++eTget We+P
  MMETSP1325-20131115|9643_1 331 WAEAHTED-GRVFFYDTETGETAWERP 356
                 98777788.*****************9 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 6e-05
                 ---SEEE.E.E-.---EEEEE CS
  PF00397.21   1 lppgWeersddd.dGrvYYyN 20 
                 lp gW ++ d + +G ++Yy 
  MMETSP1325-20131115|9643_1 370 LPHGWSAHED-PeTGVTFYYC 389
                 7999*97664.447******7 PP

>> PF01011.16  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.7e-06    0.0076       5      31 ..     334     360 ..     328     364 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.7e-06
                 EESTTTEEEEEEST---EEEEEESSSC CS
  PF01011.16   5 vgtfdGylyAlDakTGkvlWkfktggp 31 
                 ++t dG+++ +D +TG+  W+ + g+ 
  MMETSP1325-20131115|9643_1 334 AHTEDGRVFFYDTETGETAWERPSGAI 360
                 4699****************9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.39s 00:00:01.14 Elapsed: 00:00:00.60
# Mc/sec: 1765.32
//
Query:       MMETSP1325-20131115|9651_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 293.89
//
Query:       MMETSP1325-20131115|9650_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0062   15.9   6.5     0.0062   15.9   4.5    2.3  3  PF07699.8 GCC2 and GCC3
  ------ inclusion threshold ------
        1.6    8.1  12.5        0.3   10.4   0.3    3.0  3  PF11781.3 RNA polymerase I-specific transcription initiation factor Rrn7


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.4      0.43   2.9e+03      35      48 .]      27      40 ..      25      40 .. 0.81
   2 ?   -2.9   0.0      0.67   4.6e+03      22      29 ..      53      60 ..      43      65 .. 0.63
   3 !   15.9   4.5     9e-07    0.0062       2      44 ..      91     134 ..      91     137 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.43
   PF07699.8 35 ttTskkgsksesdC 48
                 +T    s+s + C
  MMETSP1325-20131115|9650_1 27 ESTVTVSSTSFTSC 40
                57888899999988 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 0.67
   PF07699.8 22 eegqkkCi 29
                ++g+ +C+
  MMETSP1325-20131115|9650_1 53 YSGDLTCT 60
                34555555 PP

  == domain 3    score: 15.9 bits;  conditional E-value: 9e-07
   PF07699.8   2 tylkkgnkkCepCprGtYk.neegqkkCiaCppgttTskkgsks 44 
                 ty +++++ C+ Cp +tY   ++ ++ C +C +g+  s  gs+ 
  MMETSP1325-20131115|9650_1  91 TYCDSSSSDCSVCPSDTYYvGYSDNTACDSCESGKGISDDGSTA 134
                 7999999**********965888888*******98777777775 PP

>> PF11781.3  RNA polymerase I-specific transcription initiation factor Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   1.0      0.69   4.7e+03      25      29 ..      90      94 ..      86      95 .. 0.70
   2 ?    6.4   0.1   0.00081       5.6      11      19 ..     100     111 ..      96     115 .. 0.74
   3 ?   10.4   0.3   4.4e-05       0.3       8      24 ..     115     131 ..     113     133 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.69
   PF11781.3 25 fyyCt 29
                ++yC+
  MMETSP1325-20131115|9650_1 90 YTYCD 94
                79995 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.00081
   PF11781.3  11 CgvCrar...wf 19 
                 C+vC+++   ++
  MMETSP1325-20131115|9650_1 100 CSVCPSDtyyVG 111
                 *******54454 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 4.4e-05
   PF11781.3   8 niaCgvCrarwfrsddG 24 
                 n aC+ C++ ++ sddG
  MMETSP1325-20131115|9650_1 115 NTACDSCESGKGISDDG 131
                 779************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 833.73
//
Query:       MMETSP1325-20131115|9649_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 1029.02
//
Query:       MMETSP1325-20131115|9652_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.31s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 977.34
//
Query:       MMETSP1325-20131115|9653_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-11   42.4   0.0    8.5e-11   41.2   0.0    1.6  2  PF08148.7 DSHCT (NUC185) domain


Domain annotation for each model (and alignments):
>> PF08148.7  DSHCT (NUC185) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.18   2.4e+03      24      44 ..     123     143 ..      92     144 .. 0.68
   2 !   41.2   0.0   6.3e-15   8.5e-11      10     180 .]     154     315 ..     145     315 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.18
   PF08148.7  24 lltellfsgvfeeldpeelaa 44 
                 +++ l  +g++ee+dpe  aa
  MMETSP1325-20131115|9653_1 123 CIAWLKGEGFLEEVDPETAAA 143
                 444444566777777776665 PP

  == domain 2    score: 41.2 bits;  conditional E-value: 6.3e-15
   PF08148.7  10 kGrvaaeisseneLlltellfsgvfeeldpeelaallsalvfeerrddeesdlppslelaealeelkeiakklakveeehrldeeeyveredlglvevvyeWarGksfaeileet.dldeGdiVRlirRlddllrqianaakvigdpelaekaeeaielikRdiVfaaslYl 180
                  Gr+ a+   +++L+++ ++ +g ++ l+ +e++a l+ ++ e+r +d       +lel ++ ++l+++ +  + + +  ++       + d +l  ++ +W++ k++++i +       G++V+ + R+   ++ ++++    g+ e+++++++ ++++  + V  +slYl
  MMETSP1325-20131115|9653_1 154 RGRACAAFADGHPLIVGTVIADGGLDALSLPEICAFLCLFLREARAKDC---TAAGLELPRPSDNLQKTFAYADGLAQYLGV-------ELDKQLSFLMLDWCERKDITRIAQWIdPHLLGTFVKAVMRVVSYIDIVREVLLGLGKYEVHNRLDNHMDALLGGLVTNESLYL 315
                 89**********************************************9...56777*******************999999.......4589*******************98747789***************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.50
# Mc/sec: 1533.67
//
Query:       MMETSP1325-20131115|9656_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|9654_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.52
# Mc/sec: 1308.78
//
Query:       MMETSP1325-20131115|9659_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.40s 00:00:00.67 Elapsed: 00:00:00.67
# Mc/sec: 132.34
//
Query:       MMETSP1325-20131115|9657_1  [L=265]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-18   65.9   1.6    2.1e-18   65.9   1.1    1.5  1  PF01920.15 Prefoldin subunit
     0.0072   14.7   2.5      0.012   14.0   1.7    1.3  1  PF09787.4  Golgin subfamily A member 5
  ------ inclusion threshold ------
      0.014   15.3   5.0       0.03   14.3   0.0    2.2  2  PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2


Domain annotation for each model (and alignments):
>> PF01920.15  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   1.1   4.6e-22   2.1e-18       2     105 ..      37     140 ..      36     142 .. 0.96

  Alignments for each domain:
  == domain 1    score: 65.9 bits;  conditional E-value: 4.6e-22
                 TT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTS-TT-EEEEE----EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---- CS
  PF01920.15   2 elinkfqqlqqqlqklaqqikqletqlkeielvleelelldedtkvykliGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkeelykklqs 105
                 e++ ++++ ++++++la++i +le + +e+ lv++++  ++ d+k ++l+G+vlv+++  ev ++++e++e ++  ++ le+ql+++ek  + +k++  ++ q+
  MMETSP1325-20131115|9657_1  37 EIAGRYKDMRMEIKNLAEKIGELEVEYNEHALVINTITPMEGDRKAFRLVGGVLVQNTCGEVLPRVKENQEMIKNTLQLLENQLRTKEKAANAWKTKYGIQTQQ 140
                 677899******************************************************************************************98777665 PP

>> PF09787.4  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   1.7   2.6e-06     0.012     271     338 ..      99     161 ..      87     168 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.6e-06
   PF09787.4 271 leelkeesehvqeeitklerqieqlkleaqdreaelsgeaesfrkqpkelsqqllpqitteselelly 338
                 l+ +ke +e+ +  +++le q+  ++  a+  +++ + +++++r+ +++++qq + ++ +      ++
  MMETSP1325-20131115|9657_1  99 LPRVKENQEMIKNTLQLLENQLRTKEKAANAWKTKYGIQTQQEREMMERAQQQQNESRVA-----GYQ 161
                 899*******************999****************************9988766.....455 PP

>> PF10046.4  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   6.5e-06      0.03      33      73 ..      38      78 ..      36      83 .. 0.90
   2 ?    1.5   1.5     0.066     3e+02       6      57 ..     103     151 ..      99     160 .. 0.66

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 6.5e-06
   PF10046.4 33 taekykeleqkakslekeleklkqkyeelkpylqqideiee 73
                 a +yk+++ ++k+l++++ +l+ +y+e +  +++i  +e+
  MMETSP1325-20131115|9657_1 38 IAGRYKDMRMEIKNLAEKIGELEVEYNEHALVINTITPMEG 78
                5789************************9999999987775 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.066
   PF10046.4   6 kkiskyveaeleisaedlklLeklNeataekykeleqkakslekeleklkqk 57 
                 k+ +++++++l+   ++l++ ek  +a   ky   +q   +    +e ++q+
  MMETSP1325-20131115|9657_1 103 KENQEMIKNTLQLLENQLRTKEKAANAWKTKYGIQTQQERE---MMERAQQQ 151
                 55678888888888888888888888888888654444433...33444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1374  (0.100497); expected 273.4 (0.02)
Passed bias filter:                      831  (0.0607812); expected 273.4 (0.02)
Passed Vit filter:                        81  (0.00592452); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.42s 00:00:01.10 Elapsed: 00:00:00.61
# Mc/sec: 1041.04
//
Query:       MMETSP1325-20131115|9662_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 813.76
//
Query:       MMETSP1325-20131115|9660_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.8   2.1      0.018   14.8   1.5    2.2  2  PF07200.8 Modifier of rudimentary (Mod(r)) protein
        1.1    8.9  13.7       0.24   11.0   2.0    2.2  2  PF10211.4 Axonemal dynein light chain


Domain annotation for each model (and alignments):
>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2     0.076   5.2e+02      64      90 ..      93     120 ..      73     138 .. 0.51
   2 ?   14.8   1.5   2.6e-06     0.018      19      86 ..     172     240 ..     168     245 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.076
                 HHHHHHHHHHHHHHHHHHHHHHHHH.HH CS
   PF07200.8  64 lqdkleelkkleekyeekkqkldel.ss 90 
                  ++++e l+ + +  ++++  l+++ s+
  MMETSP1325-20131115|9660_1  93 EEARVEALERAASDRAALEAALNKVeSE 120
                 3333333333333333333333333222 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 2.6e-06
                 HHHHGGGGS--TTT---HHHHHHHHH.HHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF07200.8  19 leefvkeldqvqdlneekeellaqne.sLaeenlekepqleelkaqlqdkleelkkleekyeekkqkld 86 
                  +e++++ld  ++++ e e++++ ++ +L +  l+ e+++++lk+  ++++e ++k++ +++e+ +kl 
  MMETSP1325-20131115|9660_1 172 TDELCAKLDRAEEQALEAEATRDAVRaELDRSRLNAEHEVDALKKAAKQEAEAFTKAKAELDELREKLA 240
                 6899*******************99758**********************************9998875 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   2.4     0.009        62     126     179 ..      87     139 ..      70     150 .. 0.70
   2 ?   11.0   2.0   3.6e-05      0.24     105     184 ..     155     234 ..     145     239 .. 0.93

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.009
   PF10211.4 126 ekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadeiaflkkqn 179
                  + +++ e ++e+Le+   + ++ le++ ++ e er++++++ha  +a+l  ++
  MMETSP1325-20131115|9660_1  87 ATSKREEEARVEALERAASD-RAALEAALNKVESERKQDQEEHAVAVAALVTAQ 139
                 44556666777777766665.555555666666677777888998888887655 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 3.6e-05
   PF10211.4 105 essvafglrkaleaeqgkselekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadeiaflkkqnqqlks 184
                 +s++ f++ ++   ++g++el ++  + ee+  e e  ++ ++++l++ + ++e+e ++ +k  ++e +++ k++++l +
  MMETSP1325-20131115|9660_1 155 ASRTGFNVWRRWAMSEGTDELCAKLDRAEEQALEAEATRDAVRAELDRSRLNAEHEVDALKKAAKQEAEAFTKAKAELDE 234
                 68999*****************************************************************9999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1490  (0.108982); expected 273.4 (0.02)
Passed bias filter:                      548  (0.0400819); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.42s 00:00:01.10 Elapsed: 00:00:00.60
# Mc/sec: 990.49
//
Query:       MMETSP1325-20131115|9661_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00092   18.9   1.8     0.0097   15.7   0.3    2.4  2  PF13424.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.022   14.5   1.9         10    6.2   0.2    3.8  3  PF07719.12 Tetratricopeptide repeat
      0.047   13.6   0.9       0.11   12.4   0.7    1.5  2  PF11214.3  Mediator complex subunit 2
      0.047   13.4   2.0       0.68    9.7   0.2    2.6  2  PF04212.13 MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.089     3e+02      23      35 ..       4      17 ..       2      21 .. 0.58
   2 !   15.7   0.3   2.8e-06    0.0097       7      72 ..      28      92 ..      22      98 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.089
   PF13424.1 23 eAlelyekalel.l 35
                eA ++y+ a+ l +
  MMETSP1325-20131115|9661_1  4 EAVTYYRNAVSLyC 17
                56666666666633 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 2.8e-06
   PF13424.1  7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdta.ralnnlanlylalgdydeAleylekA 72
                i    a+++++ ++++e+ e y++a + +  +g++  +    +l+  a+l + l+++d A e +ek+
  MMETSP1325-20131115|9661_1 28 IQKGVAEMFEEDHNFEECCEAYRQASDYY--MGENKEQASnLCLLKVAELSALLERFDYATEVFEKV 92
                566789**********************9..999998765556**********************97 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.021        73      19      31 ..       4      16 ..       2      19 .. 0.88
   2 ?    6.2   0.2     0.003        10      11      28 ..      36      53 ..      30      64 .. 0.84
   3 ?    1.5   0.0      0.09   3.1e+02       6      27 ..      71      92 ..      66      94 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.021
                HHHHHHHHHHHH- CS
  PF07719.12 19 eAleafekAleld 31
                eA+ +++ A++l+
  MMETSP1325-20131115|9661_1  4 EAVTYYRNAVSLY 16
                9*********997 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.003
                HHHTT-HHHHHHHHHHHH CS
  PF07719.12 11 yyklgdyeeAleafekAl 28
                 ++  ++ee+ ea+++A 
  MMETSP1325-20131115|9661_1 36 FEEDHNFEECCEAYRQAS 53
                566789**********95 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.09
                HHHHHHHHTT-HHHHHHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAleafekA 27
                  +++ + l +++ A e fek+
  MMETSP1325-20131115|9661_1 71 KVAELSALLERFDYATEVFEKV 92
                5677788999**********96 PP

>> PF11214.3  Mediator complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.2   7.4e+03      35      50 ..      52      67 ..      42      83 .. 0.59
   2 ?   12.4   0.7   3.2e-05      0.11      51     103 ..     173     225 ..     162     228 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 2.2
   PF11214.3 35 dsklitgfnnqlqksL 50
                 s+   g n+++ ++L
  MMETSP1325-20131115|9661_1 52 ASDYYMGENKEQASNL 67
                5555566666665444 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 3.2e-05
   PF11214.3  51 kekikkFhsi..LDdl.evklndaksyvdtlvelkkkqeekklkeEeEkkkkeeee 103
                 ++++ +F+++  LD     +ln  ++ +++ +e kk+   kk++ E E+k+k+eee
  MMETSP1325-20131115|9661_1 173 ADHVYNFDNVskLDLWcLRMLNRVREDIEEDIERKKR---KKAQAEMEAKRKKEEE 225
                 6788888877667754145799999999999999999...7788899998886555 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.033   1.1e+02      23      35 ..       4      16 ..       3      19 .. 0.86
   2 ?    9.7   0.2    0.0002      0.68      16      36 ..      37      57 ..      28      74 .. 0.88

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.033
                HHHHHHHHHHHHH CS
  PF04212.13 23 eAlelYkeAlelL 35
                eA+++Y++A+ l+
  MMETSP1325-20131115|9661_1  4 EAVTYYRNAVSLY 16
                79*******9876 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.0002
                HHTT-HHHHHHHHHHHHHHHH CS
  PF04212.13 16 DeagkyeeAlelYkeAlelLl 36
                +e +++ee++e+Y++A ++++
  MMETSP1325-20131115|9661_1 37 EEDHNFEECCEAYRQASDYYM 57
                7889***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1042  (0.0762142); expected 273.4 (0.02)
Passed bias filter:                      535  (0.0391311); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 1085.41
//
Query:       MMETSP1325-20131115|9658_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.51
# Mc/sec: 1475.40
//
Query:       MMETSP1325-20131115|9663_1  [L=600]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-06   27.8   0.0      0.049   13.7   0.0    3.6  3  PF00730.20 HhH-GPD superfamily base excision DNA repair protein
    7.3e-05   22.4   3.9       0.25   11.0   0.1    3.7  4  PF13543.1  SAM like domain present in kinase suppressor RAS 1
  ------ inclusion threshold ------
       0.12   12.6   0.0       0.12   12.6   0.0    6.3  6  PF00428.14 60s Acidic ribosomal protein
        1.7    6.1   3.6        2.1    5.8   2.5    1.1  1  PF05758.7  Ycf1
        2.1    7.3   6.8        9.9    5.1   0.2    3.3  3  PF11569.3  Homeodomain leucine-zipper encoding, Homez


Domain annotation for each model (and alignments):
>> PF00730.20  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0   0.00059       1.6      39      79 ..     347     403 ..     325     444 .. 0.73
   2 !   13.7   0.0   1.8e-05     0.049      21      79 ..     446     508 ..     426     559 .. 0.76
   3 ?    0.6   0.0       0.2   5.6e+02      41      73 ..     559     591 ..     538     595 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00059
                 HCSHHHHHHS-HHHHHHHHTT.-SHHHHHHHHHHHHHHHH................S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................x RF
  PF00730.20  39 fptpedladadeeelrelikelGfynrkakyikelarilv................g 79 
                   ++ dl +++ +++ + + e+G++ + ak+++e+ +++                 +
  MMETSP1325-20131115|9663_1 347 AGDIDDLKEMEDADIDDFVDETGMPDSDAKRLREALAAIGakvtadgggpggktvaR 403
                 56899999***************************9999877777777777666653 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 1.8e-05
                 HHHHTSSBCECET.TEEBHCSHHHHHHS-HHHHHHHHTT.-SHHHHHHHHHHHHHHHH..........S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........x RF
  PF00730.20  21 lverygnalddieigtfhfptpedladadeeelrelikelGfynrkakyikelarilv..........g 79 
                 +  +y+  l di         +ed+ +++ e+l++li ++G++ +  +++++++++l            
  MMETSP1325-20131115|9663_1 446 WLVKYKADLMDI------ADGLEDIKEMNDEDLQDLIDQCGMGMNDSRRLRRACKALGanvnvegdesD 508
                 555555444444......5579*********************************98666655555550 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.2
                 SHHHHHHS-HHHHHHHHTT.-SHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00730.20  41 tpedladadeeelrelikelGfynrkakyikel 73 
                 ++ +la+++ +++ el++e ++  + a  ++e+
  MMETSP1325-20131115|9663_1 559 SVSELAEMTDDDFDELVQEAKMKWSQAGKLREA 591
                 67789**************99999999888876 PP

>> PF13543.1  SAM like domain present in kinase suppressor RAS 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.4       4.1   1.1e+04      99     119 ..     122     142 ..     120     147 .. 0.60
   2 !    4.6   0.0    0.0089        24      93     127 ..     350     384 ..     336     385 .. 0.89
   3 !   11.0   0.1   9.2e-05      0.25      90     128 ..     458     496 ..     450     497 .. 0.91
   4 !    5.8   0.0    0.0038        10      65     126 ..     533     593 ..     522     595 .. 0.85

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 4.1
   PF13543.1  99 msdeelkeilekvgaeeeevr 119
                 m+++e +++ ++ + eee ++
  MMETSP1325-20131115|9663_1 122 MDEAEKRSLQQEQEEEEEAKS 142
                 667776666555555555444 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0089
   PF13543.1  93 leqlLemsdeelkeilekvgaeeeevrrllaalkn 127
                 +++l em+d+++ +++ + g+ + + +rl++al+ 
  MMETSP1325-20131115|9663_1 350 IDDLKEMEDADIDDFVDETGMPDSDAKRLREALAA 384
                 577889**************************976 PP

  == domain 3    score: 11.0 bits;  conditional E-value: 9.2e-05
   PF13543.1  90 lltleqlLemsdeelkeilekvgaeeeevrrllaalknL 128
                   +le++ em+de+l++++ + g+  +++rrl++a+k L
  MMETSP1325-20131115|9663_1 458 ADGLEDIKEMNDEDLQDLIDQCGMGMNDSRRLRRACKAL 496
                 56899999****************************987 PP

  == domain 4    score: 5.8 bits;  conditional E-value: 0.0038
   PF13543.1  65 eypkleqwLrvvglsqetieailkklltleqlLemsdeelkeilekvgaeeeevrrllaalk 126
                 e+ kle+w + +g  +  + ai +   + ++l em+d++  e++++ +++  +  +l++al 
  MMETSP1325-20131115|9663_1 533 ETEKLEKWVTDLGFAA-HMSAIKGVAGSVSELAEMTDDDFDELVQEAKMKWSQAGKLREALV 593
                 66899******99975.5788989999*******************9999888888888875 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   7.1       1.5     4e+03      50      71 ..       3      24 ..       1      36 [. 0.71
   2 ?  -14.2  21.5         5   1.4e+04      31      77 ..      74     133 ..      33     147 .. 0.46
   3 ?   -2.9   0.4         3   8.2e+03      52      59 ..     274     281 ..     254     296 .. 0.56
   4 ?    0.6   0.0      0.25   6.9e+02      30      55 ..     373     396 ..     352     410 .. 0.61
   5 ?   12.6   0.0   4.3e-05      0.12      27      67 ..     464     536 ..     461     546 .. 0.73
   6 ?   -0.6   0.0       0.6   1.6e+03      27      48 ..     563     587 ..     559     598 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 1.5
  PF00428.14 50 aaaaaaaaaaaaaaaaaeeekk 71
                a+a+aaaa+++ +a++a ++k 
  MMETSP1325-20131115|9663_1  3 APAPAAAATPGTSAEEAPAPKR 24
                6777777777777777777664 PP

  == domain 2    score: -14.2 bits;  conditional E-value: 5
  PF00428.14  31 egkdikeliangsakla......aaaaaaaaaaaaaaaaaaaeeekkeeeee.......E 77 
                 ++ d +e+ ++++a+ +      aaaaa a   a ++a++a e ++k   e+       E
  MMETSP1325-20131115|9663_1  74 AKLDAEEAEKEAAAQQQadgtdeAAAAAEAQRRASQEAEQARERAQKAMDEAekrslqqE 133
                 222333333333333224444533323333222223333333322222222223455552 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 3
  PF00428.14  52 aaaaaaaa 59 
                 a+a a+ a
  MMETSP1325-20131115|9663_1 274 AGAGAGSA 281
                 22222222 PP

  == domain 4    score: 0.6 bits;  conditional E-value: 0.25
  PF00428.14  30 legkdikeliangsaklaaaaaaaaa 55 
                  ++k ++e++a+++ak++  a  + +
  MMETSP1325-20131115|9663_1 373 SDAKRLREALAAIGAKVT--ADGGGP 396
                 456777888888887743..333333 PP

  == domain 5    score: 12.6 bits;  conditional E-value: 4.3e-05
  PF00428.14  27 vkalegkdikeliangsakla................................aaaaaaaaaaaaaaaaaaae 67 
                 +k+++++d+++li + +  +                                 +aaaa+aa aa+++  + ++
  MMETSP1325-20131115|9663_1 464 IKEMNDEDLQDLIDQCGMGMNdsrrlrrackalganvnvegdesdrnlgggggGAAAAPAAPAAPSGPSETEK 536
                 6889999999999999999999999999999999999999999999998764433333333333333333333 PP

  == domain 6    score: -0.6 bits;  conditional E-value: 0.6
  PF00428.14  27 vkalegkdikeliangsakla...a 48 
                 ++++++ d++el+++++ k +   +
  MMETSP1325-20131115|9663_1 563 LAEMTDDDFDELVQEAKMKWSqagK 587
                 67899999******99988775440 PP

>> PF05758.7  Ycf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   2.5   0.00076       2.1     230     289 ..      79     142 ..      37     247 .. 0.56

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.00076
   PF05758.7 230 seieer....seeekkkeieaesekkrakqeqeee.eeedsslaseekedkdkideqeekkveek 289
                 +e+e++    ++   ++e  a+ e++r++ +++e+  e+ ++ ++e ++ + + +eqee+++ ++
  MMETSP1325-20131115|9663_1  79 EEAEKEaaaqQQADGTDEAAAAAEAQRRASQEAEQaRERAQKAMDEAEKRSLQ-QEQEEEEEAKS 142
                 44444432222333333333333333333333333133334444333332222.22222222222 PP

>> PF11569.3  Homeodomain leucine-zipper encoding, Homez
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1     0.066   1.8e+02      24      38 ..     356     370 ..     352     376 .. 0.88
   2 ?    5.1   0.2    0.0036       9.9      23      42 ..     466     485 ..     462     488 .. 0.86
   3 ?    2.7   0.1     0.021        56      24      41 ..     566     583 ..     563     585 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.066
   PF11569.3  24 LqekDLdeLcekskl 38 
                 ++++D+d+ ++ +++
  MMETSP1325-20131115|9663_1 356 MEDADIDDFVDETGM 370
                 789**********99 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.0036
   PF11569.3  23 lLqekDLdeLceksklsyeq 42 
                  ++++DL++L ++ ++++++
  MMETSP1325-20131115|9663_1 466 EMNDEDLQDLIDQCGMGMND 485
                 689*************9865 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.021
   PF11569.3  24 LqekDLdeLceksklsye 41 
                 + + D deL++  k+   
  MMETSP1325-20131115|9663_1 566 MTDDDFDELVQEAKMKWS 583
                 5799**********9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (600 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1771  (0.129535); expected 273.4 (0.02)
Passed bias filter:                      626  (0.045787); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.42u 0.38s 00:00:01.79 Elapsed: 00:00:00.82
# Mc/sec: 1753.43
//
Query:       MMETSP1325-20131115|9665_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-08   32.3   0.4    1.1e-07   31.9   0.3    1.3  1  PF12796.2  Ankyrin repeats (3 copies)
    1.5e-06   27.5   0.8      0.059   13.0   0.1    2.3  2  PF00023.25 Ankyrin repeat
    7.1e-05   22.5   0.0       0.61   10.3   0.0    2.6  2  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.022   15.1   0.0      0.087   13.2   0.0    1.9  2  PF13637.1  Ankyrin repeats (many copies)
      0.027   13.6   0.2      0.027   13.6   0.1    1.5  2  PF04865.9  Baseplate J-like protein


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.3   4.2e-11   1.1e-07      29      86 ..     108     165 ..      75     167 .] 0.65

  Alignments for each domain:
  == domain 1    score: 31.9 bits;  conditional E-value: 4.2e-11
   PF12796.2  29 pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86 
                  L lAa ag + +++  l+agad+na  + ++ p+ +A+ +g+ e+v  L+ +gad++
  MMETSP1325-20131115|9665_1 108 LLLLAATAGMTSACEQCLKAGADPNANLEGQQHPITAAALSGSSETVAALVAAGADIE 165
                 5666666666666666666666666666666666666666666666666666666654 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.1   2.2e-05     0.059       6      30 ..     109     133 ..     108     134 .. 0.96
   2 !   12.8   0.0   2.6e-05     0.071       5      28 ..     141     164 ..     138     167 .] 0.90

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.2e-05
                 HHHHHHTTHHHHHHHHHHTTSSTTH CS
  PF00023.25   6 LHlAalrgnlevvklLlsqGAdlna 30 
                 L lAa  g ++ ++  l++GAd+na
  MMETSP1325-20131115|9665_1 109 LLLAATAGMTSACEQCLKAGADPNA 133
                 789*********************8 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 2.6e-05
                 HHHHHHHTTHHHHHHHHHHTTSST CS
  PF00023.25   5 PLHlAalrgnlevvklLlsqGAdl 28 
                 P   Aal+g+ e v  L+ +GAd+
  MMETSP1325-20131115|9665_1 141 PITAAALSGSSETVAALVAAGADI 164
                 7778*******************8 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00022      0.61       5      30 .]     108     133 ..     104     133 .. 0.93
   2 !    9.5   0.0   0.00042       1.2       3      29 ..     139     165 ..     137     166 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00022
   PF13606.1   5 pLhlAasngrielveaLlengadina 30 
                 +L lAa  g ++++e +l++gad+na
  MMETSP1325-20131115|9665_1 108 LLLLAATAGMTSACEQCLKAGADPNA 133
                 799*********************96 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00042
   PF13606.1   3 nTpLhlAasngrielveaLlengadin 29 
                 ++p+  Aa +g+ e v aL+ +gadi 
  MMETSP1325-20131115|9665_1 139 QHPITAAALSGSSETVAALVAAGADIE 165
                 5677789******************96 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.2e-05     0.087       4      53 ..     108     157 ..     105     158 .. 0.92
   2 ?    6.1   0.0    0.0056        15       4      27 ..     141     164 ..     140     166 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.2e-05
   PF13637.1   4 aLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53 
                 +L  aa +g + +++ +l+ g+d+n+  e +  ++  Aal g  e +  L
  MMETSP1325-20131115|9665_1 108 LLLLAATAGMTSACEQCLKAGADPNANLEGQQHPITAAALSGSSETVAAL 157
                 6778999**********************9************99999888 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0056
   PF13637.1   4 aLhyaaisgrlelvklLlekgidi 27 
                 ++  aa sg  e+v+ L++ g+di
  MMETSP1325-20131115|9665_1 141 PITAAALSGSSETVAALVAAGADI 164
                 6788999***************98 PP

>> PF04865.9  Baseplate J-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.68   1.8e+03     166     183 ..      22      39 ..      20      41 .. 0.83
   2 ?   13.6   0.1     1e-05     0.027      31     100 ..      87     166 ..      66     167 .] 0.71

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.68
   PF04865.9 166 lakVraalnaedvrPvtd 183
                 ++k +aa++ ++vr + d
  MMETSP1325-20131115|9665_1  22 VEKAQAAFETDRVRILQD 39 
                 789999999999998876 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 1e-05
   PF04865.9  31 e..ipaGtrvar.gleyatte...iiagagsvevavtaeeaGaagN.lpagtiltltpva..iqsvavvet.sgGadmEs 100
                 +  ++a +  ++ g+ y+ ++   ++a+ag ++   ++ +aGa+ N   +g++ ++t+ a   +s++v++  + Gad+E+
  MMETSP1325-20131115|9665_1  87 AeaLEAQKAQTApGTCYTLDQlllLAATAGMTSACEQCLKAGADPNaNLEGQQHPITAAAlsGSSETVAALvAAGADIET 166
                 344555555555999********9999999999999**********74455666665555424455555546*******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       589  (0.0430807); expected 273.4 (0.02)
Passed bias filter:                      477  (0.0348888); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 816.72
//
Query:       MMETSP1325-20131115|9667_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 289.37
//
Query:       MMETSP1325-20131115|9668_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-07   30.1   0.0     0.0034   17.0   0.0    2.3  2  PF00567.19 Tudor domain
    0.00011   21.3   0.0       0.02   13.8   0.0    2.1  2  PF06003.7  Survival motor neuron protein (SMN)
     0.0017   18.3   0.0     0.0039   17.1   0.0    1.6  1  PF05641.7  Agenet domain


Domain annotation for each model (and alignments):
>> PF00567.19  Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   7.5e-07    0.0034      27     107 ..      37     118 ..      24     128 .. 0.79
   2 !   11.0   0.0   5.4e-05      0.25      56     102 ..     129     174 ..     119     178 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 7.5e-07
                 CHHHHHHHHHHHHCHHHHS-B....--------EEEEE-TTT--EEEEEEEEEE---EEEEEETT---EEEEECCGEEE--HH CS
  PF00567.19  27 qdkkleklteelqeyyaskkp..veslapkvgdgcvalfsedgkwyRAkitvslddekveVlfiDyGntetvpvsdlrelpse 107
                 +  ++ +lt++l   +a+ +   v s       g ++ + + ++wy A++  +  +++++V f+ y n+etvp+  +r+l+++
  MMETSP1325-20131115|9668_1  37 DLLEVMQLTQSLAATGAQSTTtaVASSDGLLSVGTLCEAVFGEAWYPATV-LEAGADAYKVSFLGYNNEETVPLASVRPLSHK 118
                 555666777777777777777654445555555677888888********.*****************************954 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 5.4e-05
                 --EEEEE-TTT--EEEEEEEEEE---EEEEEETT---EEEEECCGEE CS
  PF00567.19  56 gdgcvalfsedgkwyRAkitvslddekveVlfiDyGntetvpvsdlr 102
                 g  c al+ +dg+w+ +++ +s+ ++ + V f  +Gn+e++p+  lr
  MMETSP1325-20131115|9668_1 129 GLVCEALYVVDGQWHDVQV-DSKTERGYMVTFTKFGNSEELPLAYLR 174
                 667889*************.*********************998776 PP

>> PF06003.7  Survival motor neuron protein (SMN)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0014       6.4      61     122 ..      59     116 ..      50     128 .. 0.78
   2 !   13.8   0.0   4.4e-06      0.02      72     124 ..     129     179 ..     120     203 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0014
   PF06003.7  61 cnaaplkkwkvgdscnavwsedgnlysatiasidakrgtcvvvytgygneeeqnladlltea 122
                 + a+ +    vg  c+av+ e    y+at+  ++a   +  v + gy nee   la +++ +
  MMETSP1325-20131115|9668_1  59 AVASSDGLLSVGTLCEAVFGEA--WYPATV--LEAGADAYKVSFLGYNNEETVPLASVRPLS 116
                 45556666789********995..7***98..56666778899*********9999988654 PP

  == domain 2    score: 13.8 bits;  conditional E-value: 4.4e-06
   PF06003.7  72 gdscnavwsedgnlysatiasidakrgtcvvvytgygneeeqnladllteasd 124
                 g  c+a++  dg+ +   + s     +  +v++t +gn+ee  la l+ +a  
  MMETSP1325-20131115|9668_1 129 GLVCEALYVVDGQWHDVQVDSK--TERGYMVTFTKFGNSEELPLAYLRLPADG 179
                 5579*********999998874..3456799****************999765 PP

>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   8.7e-07    0.0039      16      63 ..      77     115 ..      72     119 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 8.7e-07
   PF05641.7  16 lrgaWfrAkVlkelkeskykveyddlsledgeskllketvdlrrlRPv 63 
                 ++ aW++A+Vl++  +  ykv++  + +        +etv+l ++RP 
  MMETSP1325-20131115|9668_1  77 FGEAWYPATVLEAGAD-AYKVSFLGYNN--------EETVPLASVRPL 115
                 788*************.******77664........488888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.56
# Mc/sec: 932.87
//
Query:       MMETSP1325-20131115|9672_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.46    9.9   7.5       0.47    9.8   5.2    1.0  1  PF08949.5 Domain of unknown function (DUF1860)


Domain annotation for each model (and alignments):
>> PF08949.5  Domain of unknown function (DUF1860)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.2   3.4e-05      0.47      69     100 ..      13      45 ..       3      57 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 3.4e-05
   PF08949.5  69 sgggggggggvtdalsllys.tssggpasiaan 100
                  ggggggg g  d  s++ + t +gg a+ aa 
  MMETSP1325-20131115|9672_1  13 GGGGGGGGSGSGDRRSFVAAeTGAGGAAAAAAX 45 
                 356666777889999987652566666665553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 252.25
//
Query:       MMETSP1325-20131115|9671_1  [L=236]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.017   14.9   0.1      0.044   13.5   0.0    1.6  2  PF00784.12 MyTH4 domain


Domain annotation for each model (and alignments):
>> PF00784.12  MyTH4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.2e-06     0.044      27      72 ..      49      96 ..      48     111 .. 0.79
   2 ?   -2.8   0.0      0.37   5.1e+03      82     106 ..     136     160 ..     125     172 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.2e-06
  PF00784.12 27 QiikQltknps.kesaekgWeLltlltstfpPSeellkyls.eflkkr 72
                Q+++ ++   + ++s e+gW L ++ t+t+p+ ++l  + + +++++ 
  MMETSP1325-20131115|9671_1 49 QMSRRTRARMQaVQSRENGWDLTSCRTATMPSYNALYDPNMrHYFENT 96
                7777887776669**********************9876553777765 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.37
  PF00784.12  82 leglaakclerLkktkkegkRklpP 106
                 ++++ ++ +e+  ++ +++kR+ ++
  MMETSP1325-20131115|9671_1 136 KSEYWRQKEEEEMRYRVQQKRHAAL 160
                 4445444444445555666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1140  (0.0833821); expected 273.4 (0.02)
Passed bias filter:                      446  (0.0326214); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.35s 00:00:00.94 Elapsed: 00:00:00.62
# Mc/sec: 912.16
//
Query:       MMETSP1325-20131115|9674_1  [L=351]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-15   55.1   0.0    2.1e-11   43.8   0.0    2.7  3  PF12796.2  Ankyrin repeats (3 copies)
    8.2e-11   42.0   0.1    4.1e-06   27.0   0.1    2.6  2  PF13637.1  Ankyrin repeats (many copies)
    1.4e-10   40.3   0.0    1.3e-05   24.6   0.0    3.8  4  PF00023.25 Ankyrin repeat
      5e-10   39.1   0.0    2.4e-05   24.3   0.0    2.7  2  PF13857.1  Ankyrin repeats (many copies)
    5.5e-09   35.3   0.0     0.0042   17.0   0.0    3.1  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.9e-06    0.0053      55      86 ..      80     111 ..      65     114 .. 0.86
   2 !   43.8   0.0   7.7e-15   2.1e-11       4      83 ..      91     178 ..      90     187 .. 0.92
   3 ?   -2.0   0.0       1.5   4.1e+03       4      23 ..     246     265 ..     225     271 .. 0.69

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.9e-06
   PF12796.2  55 kdkegntpLhlAvrnghlelvklLlekgadvn 86 
                 +d +g++p   A+r ++++++++L+e+gad  
  MMETSP1325-20131115|9674_1  80 TDSYGRSPASKACRERRHDILQWLCEHGADAK 111
                 4579************************9975 PP

  == domain 2    score: 43.8 bits;  conditional E-value: 7.7e-15
   PF12796.2   4 AaengnlelvklLlekgadvdl.......getpLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklLlekga 83 
                 A++  + +++++L+e+gad          g tpL +A++ g+l++++ L+ ag +++a+    g tp+ +A  +g++++  +Ll +g 
  MMETSP1325-20131115|9674_1  91 ACRERRHDILQWLCEHGADAKDlrasddfGYTPLVWACREGDLDCIRSLIRAGVSLEATArTAGPTPMWAAFAFGRHDVTTFLLMNGY 178
                 89999************988888888888899************************999999*********************98875 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 1.5
   PF12796.2   4 AaengnlelvklLlekgadv 23 
                 A + +n++ v  ++e+ga++
  MMETSP1325-20131115|9674_1 246 ASQLKNIHRVSAIMEEGAKL 265
                 44455555555555555554 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.1   1.5e-09   4.1e-06       2      53 ..      85     139 ..      84     140 .. 0.89
   2 !   20.6   0.0   1.6e-07   0.00043       1      54 []     120     174 ..     120     174 .. 0.95

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 1.5e-09
   PF13637.1   2 ltaLhyaaisgrlelvklLlekgid...inrtdesGntaLhiAalrgnieilklL 53 
                 +++  +a++  r++++++L+e+g+d   + + d++G t+L  A++ g++++++ L
  MMETSP1325-20131115|9674_1  85 RSPASKACRERRHDILQWLCEHGADakdLRASDDFGYTPLVWACREGDLDCIRSL 139
                 677789*****************886668888*******************9855 PP

  == domain 2    score: 20.6 bits;  conditional E-value: 1.6e-07
   PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklLl 54 
                 g+t+L +a++ g+l+++++L+  g+++ +t    G t++  A  +g+ +++ +Ll
  MMETSP1325-20131115|9674_1 120 GYTPLVWACREGDLDCIRSLIRAGVSLEATaRTAGPTPMWAAFAFGRHDVTTFLL 174
                 579******************88*******9889*******************97 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0002      0.55       2      27 ..      84     109 ..      83     111 .. 0.88
   2 !   24.6   0.0   4.6e-09   1.3e-05       2      31 ..     120     149 ..     119     151 .. 0.94
   3 ?    0.1   0.0      0.26   7.2e+02      12      25 ..     164     177 ..     156     180 .. 0.77
   4 ?   -1.7   0.0         1   2.8e+03       7      26 ..     236     263 ..     236     266 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0002
                 SCBHHHHHHHTTHHHHHHHHHHTTSS CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAd 27 
                 G++P   A++  +++++++L ++GAd
  MMETSP1325-20131115|9674_1  84 GRSPASKACRERRHDILQWLCEHGAD 109
                 66677779*****************9 PP

  == domain 2    score: 24.6 bits;  conditional E-value: 4.6e-09
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHB CS
  PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaq 31 
                 G+TPL +A++ g+l++++ L+ +G +l a+
  MMETSP1325-20131115|9674_1 120 GYTPLVWACREGDLDCIRSLIRAGVSLEAT 149
                 9*************************9885 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.26
                 TTHHHHHHHHHHTT CS
  PF00023.25  12 rgnlevvklLlsqG 25 
                  g+++v ++Ll +G
  MMETSP1325-20131115|9674_1 164 FGRHDVTTFLLMNG 177
                 4699*******988 PP

  == domain 4    score: -1.7 bits;  conditional E-value: 1
                 HHHHHTT........HHHHHHHHHHTTS CS
  PF00023.25   7 HlAalrg........nlevvklLlsqGA 26 
                 H+A++ g        n+  v+   + GA
  MMETSP1325-20131115|9674_1 236 HIASYAGvpsasqlkNIHRVSAIMEEGA 263
                 8999988776666666655665555555 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   3.2e-05     0.087      12      43 ..      80     111 ..      77     115 .. 0.93
   2 !   24.3   0.0   8.6e-09   2.4e-05       8      51 ..     112     156 ..     110     161 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.2e-05
   PF13857.1  12 tdeggntpLhlAakggalevvrlLlapgadln 43 
                 td +g++p  +A++  + +++++L+++gad++
  MMETSP1325-20131115|9674_1  80 TDSYGRSPASKACRERRHDILQWLCEHGADAK 111
                 7999**************************87 PP

  == domain 2    score: 24.3 bits;  conditional E-value: 8.6e-09
   PF13857.1   8 dvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdg.lt 51 
                 d+ a+d +g+tpL +A++ g+l+++r L+++g++l ++      t
  MMETSP1325-20131115|9674_1 112 DLRASDDFGYTPLVWACREGDLDCIRSLIRAGVSLEATARTAgPT 156
                 67899***************************9998887655555 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.5e-06    0.0042       1      27 [.      83     109 ..      83     112 .. 0.95
   2 !   14.4   0.0   1.1e-05      0.03       1      28 [.     119     146 ..     119     148 .. 0.92
   3 ?   -1.5   0.0       1.5     4e+03       8      25 ..     160     177 ..     154     180 .. 0.73

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.5e-06
   PF13606.1   1 nGnTpLhlAasngrielveaLlengad 27 
                 +G++p   A++ +r +++++L+e+gad
  MMETSP1325-20131115|9674_1  83 YGRSPASKACRERRHDILQWLCEHGAD 109
                 79************************9 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1.1e-05
   PF13606.1   1 nGnTpLhlAasngrielveaLlengadi 28 
                 +G+TpL +A++ g ++ ++ L+++g+ +
  MMETSP1325-20131115|9674_1 119 FGYTPLVWACREGDLDCIRSLIRAGVSL 146
                 59**********************9876 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 1.5
   PF13606.1   8 lAasngrielveaLleng 25 
                  A  +gr ++  +Ll ng
  MMETSP1325-20131115|9674_1 160 AAFAFGRHDVTTFLLMNG 177
                 344479999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.74
# Mc/sec: 1136.65
//
Query:       MMETSP1325-20131115|9675_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        98  (0.00716793); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 192.65
//
Query:       MMETSP1325-20131115|9678_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0038   16.1   0.3     0.0041   16.0   0.2    1.1  1  PF00144.19 Beta-lactamase


Domain annotation for each model (and alignments):
>> PF00144.19  Beta-lactamase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2     3e-07    0.0041     140     239 ..       2     115 ..       1     156 [. 0.69

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 3e-07
                 .EE.--TTTHHHHHHHCCHHH...HHHHHHHHHHHTTTT..............T.TSTTEESSHHGGGGGGBEEEC.CTT....EE....HHHH......EEEHHHHHHHHHHHHHTG CS
  PF00144.19 140 tkwgYsntgygllgellekvt...grsleqllreeilrp..............L.gmkdtelgppesgdprdaagytgngpearappanlpaeaegagglistardlarflglalegg 239
                 t+ +Y ++g+ l++el+++v+    r+ ++++r+++l p                    t+l + ++gd+r a   ++ ++ea +++a ++a +     +  ta  l++  g+a+++g
  MMETSP1325-20131115|9678_1   2 TRVRYAALGFLLAAELAGGVAveaARRTAEFVRRHVLPPpppgtwrqqrsaatAdRVPATALESEDEGDEREADEGARMRREAAVDVAAAGATR----XVHETAQELCAMHGTAQGPG 115
                 7889*******************77**************6666666666665523555666666666666666655555555555555555554....36666666666665544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.43s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|9670_1  [L=474]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-23   83.0   0.0    3.1e-23   82.3   0.0    1.4  1  PF01370.16 NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.018   14.3   0.0      0.033   13.4   0.0    1.5  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
      0.054   12.0   0.0       0.11   11.0   0.0    1.4  1  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family
       0.09   12.4   0.1       0.44   10.1   0.0    2.2  2  PF03033.15 Glycosyltransferase family 28 N-terminal domain


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.3   0.0   9.1e-27   3.1e-23       1     227 [.      50     333 ..      50     343 .. 0.84

  Alignments for each domain:
  == domain 1    score: 82.3 bits;  conditional E-value: 9.1e-27
                 EEEE--------HHHHHHHHH-TEEE...EESSCSTCCCCCCHHH...................TBEEEB--TT.-HHHHHHHHHHHT.SEEEE--S---...HHHCCCSHHHHHHHHT---HHHHHHHHHHTT..EEEEEEEGGG---B.SSSC............B-TTS----SSH...HHHHHHHHHHHHHHHHHHHT-EEEEEEESEEE-TT.................-SHHCHHHHHHHHHH---SEEEE--TT-EEEEEEHHHHHHHHHHHHHSSS CS
  PF01370.16   1 ilVtGatGfiGsalveallekgyevv...nlirrtrseslatvri...................rvelveldlt.dkdalerlfaeeqpdaVihlAaesg...vdassedpadfieanvegtlnlleaarkagv.krflfasSsevygkd.aeqp............ikEetplgplsp...YaaaKlageklveayaeeyglnaiilrlfnvyGpr..............nfdeevshvipalirkilegeevtllgdGtqlRdflyveDvaealllvlehgd 227
                 i+V+G+ Gf G  ++ +l ++g+ev+   nl+rr+   +l++++                    +v++v++d+  +   + +++++e+pdaVih++ + +    +++ + + ++i++n+ gt nll a+ + g    ++++++  vyg   ++ +             + +  l+p  p   Y a+K+    l + y++  gl+++ l    v G +              ++d++   v+++++ +   g ++t++g+G q R ++++ D a+++ l+++++ 
  MMETSP1325-20131115|9670_1  50 IVVLGGDGFCGWPTTLHLSDAGHEVImvdNLSRRNIDIELGCSSLtpiespevrckawkevsgkDVRFVNIDVAkEYHVMLKFLEDEKPDAVIHFGEQRAapySMRNDKAKRYTIDNNLSGTHNLLCAIVESGLdIHLVHLGTMGVYGYGtSGGEipegyidvilpgGRPSKILHPAYPgsiYHATKVLDATLFQFYNKNDGLRITDLHQGIVWGTNtpqtvlderlinrfDYDGDYGTVLNRFLMQSALGIPLTVYGTGGQTRALIHITDTAKCIELAINNPP 333
                 89**********************8899**************999*****************************8889999**************99987555667778899**********************99*************954443334444444333222333333333666***********************************666666666666666666666666666666668888**************************99986 PP

>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   9.8e-06     0.033       2      35 ..      49      83 ..      48     120 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 9.8e-06
                EEEEE.------------TTT---EEE---S-HHH CS
   PF03721.9  2 kiavi.GlGYvGlptavvlaekghevvgvDineek 35
                ki v+ G G+ G pt   l+  ghev++vD+ +++
  MMETSP1325-20131115|9670_1 49 KIVVLgGDGFCGWPTTLHLSDAGHEVIMVDNLSRR 83
                67777257**********************98765 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.2e-05      0.11       1     131 [.      51     207 ..      51     213 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.2e-05
  PF01073.14   1 lVtGgsGFlGrrlvreLleleelkevrvld.......................lrespelleelsklqvkt..vlegDvtdkekl.eealegv..dvviht....aaiidvlgkaerdeilkvnvkGTqnvleacvkagvr.vlvYtSsaevvgpnvkgqeiln 131
                 +V+Gg GF G     +L +++  +ev ++d                       +r + ++  e+s     +  +++ Dv ++ ++  + le+   d+vih     aa   ++    +   ++ n++GT+n+l a v++g   +lv+  ++ v g  + g ei +
  MMETSP1325-20131115|9670_1  51 VVLGGDGFCGWPTTLHLSDAG--HEVIMVDnlsrrnidielgcssltpiespeVRCKAWK--EVSGK---DvrFVNIDVAKEYHVmLKFLEDEkpDAVIHFgeqrAAPYSMRNDKAKRYTIDNNLSGTHNLLCAIVESGLDiHLVHLGTMGVYGYGTSGGEIPE 207
                 688888888888888888888..5777777777777778888877775433222222222..34444...34499999998866515677664237999975544555566666666667889*****************8469******99988777777665 PP

>> PF03033.15  Glycosyltransferase family 28 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00013      0.44      10     107 ..      55     156 ..      53     164 .. 0.74
   2 ?   -2.3   0.1      0.92   3.1e+03       3      10 ..     303     310 ..     301     318 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00013
                 ---HHHHHHHHHHHC---EEEEEETCCCHHHH.CC---E.EEE----...S------.-HHHHH-CH.HHHHHHHHHHHHHHHHHHCCCCHH----EEEE--HH CS
  PF03033.15  10 GdvePavAlareLqrrGheVrlatppgleefv.eeagle.avpigpd...vklwakleslktlkela.eglkalrkakeilkeakpdvvvgfggyvadlaliaa 107
                 Gd +   +   +L ++GheV + + +  ++ +  e g +   pi++     k+w+++ s k ++ +  ++ k+++ + + l+++kpd+v+ fg++ a++ +  +
  MMETSP1325-20131115|9670_1  55 GDGFCGWPTTLHLSDAGHEV-IMVDNLSRRNIdIELGCSsLTPIESPevrCKAWKEV-SGKDVRFVNiDVAKEYHVMLKFLEDEKPDAVIHFGEQRAAPYSMRN 156
                 55566667778899999999.555666666666555554134466557778899988.888888876356799***********************99987765 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.92
                 EE------ CS
  PF03033.15   3 laggGTrG 10 
                 l+++GT+G
  MMETSP1325-20131115|9670_1 303 LTVYGTGG 310
                 899****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.50s 00:00:01.21 Elapsed: 00:00:00.52
# Mc/sec: 2184.37
//
Query:       MMETSP1325-20131115|9681_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-10   40.6   6.8    1.5e-10   40.4   4.7    1.0  1  PF01061.19 ABC-2 type transporter
  ------ inclusion threshold ------
      0.041   12.7   5.1      0.045   12.6   3.5    1.1  1  PF12698.2  ABC-2 family transporter protein
      0.063   13.2   0.1      0.092   12.7   0.0    1.2  1  PF03862.8  SpoVA protein
        0.1   11.8   0.1        0.1   11.8   0.0    1.7  2  PF04478.7  Mid2 like cell wall stress sensor
       0.16   10.5   3.6       0.21   10.2   2.5    1.1  1  PF05072.8  Herpesvirus UL43 protein
        3.3    7.4   6.1        1.5    8.5   2.5    1.9  1  PF05656.9  Protein of unknown function (DUF805)
          7    6.3   6.6         13    5.4   4.6    1.5  1  PF10856.3  Protein of unknown function (DUF2678)


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   4.7   7.7e-14   1.5e-10      93     204 ..       3     116 ..       1     120 [. 0.90

  Alignments for each domain:
  == domain 1    score: 40.4 bits;  conditional E-value: 7.7e-14
  PF01061.19  93 lsaivlakvlvelpvsllqaiifllivyflvgldlsfflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsm..p.kwlqwiyylnPltyaveal 204
                  +a++lak++ve+p+  +++++++ ++y l + +  f++++l++++ a+++s+++ ++s +a++ + a++ + ++++++ +++Gv   ld +    k +  +++ ++ +++ve l
  MMETSP1325-20131115|9681_1   3 KPAFFLAKCIVEIPRLAVLVLMLISTFYPLASPRTPFVIYFLICMAAAWAISGWATILS-IAQDPKSAQLSIVVIMVIFCMFCGVSPRLDELdkMgKPMTIVAWTSFARWFVECL 116
                 589**************************96555559*********************9.7************************9998888752468999***********987 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.5   2.3e-05     0.045     220     300 ..      21     103 ..       8     118 .. 0.63

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.3e-05
   PF12698.2 220 lllilllafglegipfgnlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfp....leslpsflkwi 300
                 l+l+l+  f   + p + +++++l+  + ++a+++++ +ls +  ++++aql i+++++++++f++++ p    l+++ +++  +
  MMETSP1325-20131115|9681_1  21 LVLMLISTFYPLASPRTPFVIYFLICMAAAWAISGWATILSIAQ-DPKSAQLSIVVIMVIFCMFCGVS-PrldeLDKMGKPMTIV 103
                 23333334442224555666777888888888888877776665.69999998888888666666555.5435555555544444 PP

>> PF03862.8  SpoVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.7e-05     0.092      11      87 ..      43     122 ..      36     125 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.7e-05
   PF03862.8  11 GliCvigqilldlllk...lglseklasaavlvvlvllgalLtglgvYdklvkfagAGatvPitgFanslvkgaieekke 87 
                  liC+ +   ++ +++   +  + k a+  ++v++v++ ++ +     d+l k+++  ++v  t+Fa + v++   e+++
  MMETSP1325-20131115|9681_1  43 FLICMAAAWAISGWATilsIAQDPKSAQLSIVVIMVIFCMFCGVSPRLDELDKMGKPMTIVAWTSFARWFVECLYTEETK 122
                 57777777666544433125566788899999**************************************9998777655 PP

>> PF04478.7  Mid2 like cell wall stress sensor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2      0.61   1.2e+03      55      84 ..      11      40 ..       7      41 .. 0.56
   2 ?   11.8   0.0   5.3e-05       0.1      64     107 ..      73     116 ..      68     127 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.61
   PF04478.7 55 cvvGigvPlllvilvliy.ifCikekrtdfi 84
                c+v i     +++l+li  ++ + + rt f+
  MMETSP1325-20131115|9681_1 11 CIVEIPRLA-VLVLMLIStFYPLASPRTPFV 40
                666654433.344444440446788888875 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 5.3e-05
   PF04478.7  64 llvilvliyifCikekrtdfidsdGkvvtayrsnklskwWkall 107
                 ++vi+v+  +fC  + r d +d  Gk +t    + +++w+   l
  MMETSP1325-20131115|9681_1  73 IVVIMVIFCMFCGVSPRLDELDKMGKPMTIVAWTSFARWFVECL 116
                 6777777789*******************999999999987655 PP

>> PF05072.8  Herpesvirus UL43 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.5   0.00011      0.21      78     120 ..      44      86 ..       8      89 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00011
   PF05072.8  78 lqliaalvaavlwtlgaaanavypatlrlalsasllllvvlaa 120
                 l  +aa+ a + w+ +  + ++++ +++ ++++++++ + +++
  MMETSP1325-20131115|9681_1  44 LICMAAAWAISGWATILSIAQDPKSAQLSIVVIMVIFCMFCGV 86 
                 34567888999******************************98 PP

>> PF05656.9  Protein of unknown function (DUF805)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.5   0.00079       1.5      10      58 ..      35      82 ..      32     127 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00079
   PF05656.9 10 sRseywwfvlfnillsivllildillsessssaaseslalllgllllal 58
                 R+ +++++l+++++++++++ +++l + ++ + s +l+++++++++ +
  MMETSP1325-20131115|9681_1 35 PRTPFVIYFLICMAAAWAISGWATIL-SIAQDPKSAQLSIVVIMVIFCM 82
                6999********************99.3333333333333333222222 PP

>> PF10856.3  Protein of unknown function (DUF2678)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   4.6    0.0067        13      39      94 ..      17      71 ..       6      88 .. 0.61

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0067
   PF10856.3 39 svlvlvtvvssvvfp.slppkalniffavcilli.csstivlifwyrqgdlepkfrnl 94
                 + vlv ++ s  +p ++p +++ i+f +c+  + ++s+   i+   q   +pk  +l
  MMETSP1325-20131115|9681_1 17 RLAVLVLMLISTFYPlASPRTPFVIYFLICMAAAwAISGWATILSIAQ---DPKSAQL 71
                45666667666677725566799*******976524555555554444...5666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       587  (0.0429345); expected 273.4 (0.02)
Passed bias filter:                      387  (0.028306); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.42s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|9679_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-22   78.0   3.4    3.2e-22   77.7   1.1    2.1  2  PF00327.15 Ribosomal protein L30p/L7e
    3.9e-21   74.7  10.9    6.4e-21   74.0   7.6    1.4  1  PF08079.7  Ribosomal L30 N-terminal domain
  ------ inclusion threshold ------
      0.012   15.0   0.1      0.025   14.0   0.1    1.5  1  PF08199.6  Bacteriophage E2-like protein
       0.59    9.7   4.2       0.93    9.0   2.9    1.2  1  PF05766.7  Bacteriophage Lambda NinG protein


Domain annotation for each model (and alignments):
>> PF00327.15  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.7   1.1   9.4e-26   3.2e-22       1      52 []      80     131 ..      80     131 .. 0.98
   2 ?   -1.6   0.0      0.56   1.9e+03      43      52 .]     136     145 ..     135     145 .. 0.85

  Alignments for each domain:
  == domain 1    score: 77.7 bits;  conditional E-value: 9.4e-26
                 -EEEEE----TTS-HHHHHHHHHTT--STTEEEEE--STTT---HHHHTTCE CS
  PF00327.15   1 llfiirirgiigvppkikktLqlLrLrkindavfvkdtpairgmlkkVkhlV 52 
                 l+f++rirgiigv pk+kk+LqlLrLr+i+++vfvk++ a+ +ml+ V++++
  MMETSP1325-20131115|9679_1  80 LAFVVRIRGIIGVSPKVKKILQLLRLRQIFNGVFVKLNSATIKMLRLVEPYI 131
                 68*************************************************8 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.56
                 --HHHHTTCE CS
  PF00327.15  43 gmlkkVkhlV 52 
                 + lk+Vk+l+
  MMETSP1325-20131115|9679_1 136 PNLKSVKELI 145
                 6799***998 PP

>> PF08079.7  Ribosomal L30 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   7.6   1.9e-24   6.4e-21       1      71 []       8      78 ..       8      78 .. 0.99

  Alignments for each domain:
  == domain 1    score: 74.0 bits;  conditional E-value: 1.9e-24
   PF08079.7  1 sllKkrkrneklrakrakkaaakkkarkkkrkeifkRAekYvkEYrakerdeirlkReAkkkGnfYvPaea 71
                s+lKkrk+++k++a++ ++ +++ k+++ k+ e++kRAe+Yv+EY + e d irl+ReAk+kG++YvP e+
  MMETSP1325-20131115|9679_1  8 SVLKKRKTQAKIAADKEAADKEATKKAATKKDEMLKRAETYVNEYTKLENDAIRLRREAKTKGSYYVPGEP 78
                79*******************************************************************98 PP

>> PF08199.6  Bacteriophage E2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   7.4e-06     0.025       5      22 ..     144     162 ..     141     164 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 7.4e-06
   PF08199.6   5 LLYlR.FGKsIKRRvLIDN 22 
                 L+Y R FGK +K Rv IDN
  MMETSP1325-20131115|9679_1 144 LIYKRgFGKRMKQRVAIDN 162
                 899999************9 PP

>> PF05766.7  Bacteriophage Lambda NinG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.9   0.00027      0.93      39      84 ..      11      56 ..       5      63 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00027
   PF05766.7 39 kkkekkrkkeekeerkelkarkeklktrsewlkeaqkavnkyirlr 84
                kk+++++k ++++e ++ +a k+++ ++ e+lk a++ vn+y +l 
  MMETSP1325-20131115|9679_1 11 KKRKTQAKIAADKEAADKEATKKAATKKDEMLKRAETYVNEYTKLE 56
                56777778888888889999999999999*************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       993  (0.0726302); expected 273.4 (0.02)
Passed bias filter:                      644  (0.0471036); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.45s 00:00:01.10 Elapsed: 00:00:00.52
# Mc/sec: 1096.79
//
Query:       MMETSP1325-20131115|9682_1  [L=440]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.36s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 2108.79
//
Query:       MMETSP1325-20131115|9683_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.17   10.3   6.7       0.34    9.4   4.7    1.6  1  PF10428.4  RAM signalling pathway protein
       0.32   10.1  18.8       0.76    8.8  12.6    2.0  1  PF11932.3  Protein of unknown function (DUF3450)
       0.78    9.4   7.8       0.82    9.3   1.3    2.8  3  PF07889.7  Protein of unknown function (DUF1664)
       0.82    9.9  10.5       0.25   11.5   2.1    2.4  2  PF06156.8  Protein of unknown function (DUF972)
          1    9.1  17.7       0.16   11.7   7.3    2.5  2  PF11559.3  Afadin- and alpha -actinin-Binding
        1.2    8.7  16.6       0.29   10.6   6.7    2.4  2  PF13874.1  Nucleoporin complex subunit 54
        1.7    8.8   8.4        1.1    9.4   4.6    1.5  1  PF03234.9  Cdc37 N terminal kinase binding
        2.1    8.0  15.7        0.2   11.4   0.7    3.0  2  PF06148.6  COG (conserved oligomeric Golgi) complex component, COG2
        2.3    7.0  14.8        3.1    6.5  10.3    1.2  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
        3.5    7.7   8.9        1.6    8.8   3.8    2.1  2  PF00804.20 Syntaxin
        3.7    6.9  20.9        0.3   10.5   4.4    2.2  2  PF04156.9  IncA protein
        4.4    5.6  12.0        4.9    5.4   8.3    1.1  1  PF06082.6  Bacterial putative lipoprotein (DUF940)


Domain annotation for each model (and alignments):
>> PF10428.4  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   4.7    0.0003      0.34     285     362 ..      80     157 ..       6     188 .. 0.83

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0003
   PF10428.4 285 fekLetatklvlrvlpqlteeisksaiastssrqltpslveklkeLiekcrqalqlteaLrerLsllktkepkgttre 362
                  ek+ ++   +++ +  l +++ ++a a+++++ ++ ++ve  ++L+ +++    lt+a rerL+ +k  e +  ++e
  MMETSP1325-20131115|9683_1  80 AEKVAEVQARANTKIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATELSALTKAQRERLQSMKGTEASVESAE 157
                 578888899999999*******************99********************************6665555444 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  12.6   0.00067      0.76      17     111 ..      73     167 ..       3     174 .. 0.92

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00067
   PF11932.3  17 aavaaasldqaqeaeqkanaaaaqsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeieetrqeivPlmlkm 111
                  a++  +++++ e++++an++    q+  +++a++++e++++  ++ e+ ++l++   +l++l++ q+++l+s++   +++e ++ +++    +m
  MMETSP1325-20131115|9683_1  73 EAAETHAAEKVAEVQARANTKIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATELSALTKAQRERLQSMKGTEASVESAEAALLEARKEM 167
                 355567789***********************************************************************999998887666665 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.3   0.00072      0.82      42      83 ..      21      62 ..      13     113 .. 0.84
   2 ?    1.7   0.4      0.16   1.8e+02      56     112 ..      80     136 ..      71     150 .. 0.55
   3 ?    1.4   0.8       0.2   2.2e+02      58      98 ..     134     174 ..      94     188 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00072
   PF07889.7 42 adAvasvtkqlekvseavasakkhLsqridnlddkldeqkei 83
                + A+a++   l    e+v + + + sqr++ + ++l++ ke 
  MMETSP1325-20131115|9683_1 21 SAACAKLEASLAAAREEVDAMRGEHSQRLEAVRRELEDDKER 62
                689*********************************998874 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.16
   PF07889.7  56 seavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvv 112
                  e+va+ + +   +i+ l++  ++ ++ + e k+  + + e  ++++    +l  + 
  MMETSP1325-20131115|9683_1  80 AEKVAEVQARANTKIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATELSALT 136
                 455555555555566666666666666555555555555555555555555555555 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.2
   PF07889.7  58 avasakkhLsqridnlddkldeqkeiskeikeevteiredl 98 
                 a+++a+++  q ++  + +++  ++   e ++e++e+++  
  MMETSP1325-20131115|9683_1 134 ALTKAQRERLQSMKGTEASVESAEAALLEARKEMAEVHDRA 174
                 45555555555666666666666666666666666666554 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.5       0.1   1.2e+02      11      55 ..      25      68 ..       3      91 .. 0.49
   2 ?   11.5   2.1   0.00022      0.25       8      75 ..      92     164 ..      87     174 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.1
   PF06156.8 11 seleeqleelleeleelkkelkelleenaelkleneklrerleel 55
                ++le +l +  ee+++++ e ++ le   + +le +k r   +e 
  MMETSP1325-20131115|9683_1 25 AKLEASLAAAREEVDAMRGEHSQRLEA-VRRELEDDKERALAAER 68
                445555555555555555555554443.22233333333322222 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00022
   PF06156.8   8 dklseleeqleelleeleelkkelkelleenaelkleneklrerleelee.....eekkkekkkkkkklgegk 75 
                 +k+++l++  e++ +  +e k++ ++ +e++a+l++  ++l    + ++e     + ++++ ++++  l e++
  MMETSP1325-20131115|9683_1  92 TKIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATELSALTKAQRErlqsmKGTEASVESAEAALLEAR 164
                 6899**********************************99998665555444333222333333333344555 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.2      0.24   2.8e+02      75     102 ..      24      52 ..       6      72 .. 0.55
   2 ?   11.7   7.3   0.00014      0.16      53     129 ..      79     155 ..      71     175 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.24
   PF11559.3  75 ierlktqleqlerelallq.ekerqlekk 102
                  ++l+ +l++ + e++++  e  + le+ 
  MMETSP1325-20131115|9683_1  24 CAKLEASLAAAREEVDAMRgEHSQRLEAV 52 
                 34455555555555543320222233333 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00014
   PF11559.3  53 qresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkniiqsikt 129
                 + e+++e + + +  i+ lq+++e++    ++ +++ a++ e+e+ql+   ++l++ +k+++e lq +k + +s++ 
  MMETSP1325-20131115|9683_1  79 AAEKVAEVQARANTKIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATELSALTKAQRERLQSMKGTEASVES 155
                 56788888999999****************************************************99998887765 PP

>> PF13874.1  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.4      0.12   1.4e+02     100     127 ..      33      60 ..      19      78 .. 0.65
   2 ?   10.6   6.7   0.00026      0.29      42     134 ..      83     175 ..      77     182 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.12
   PF13874.1 100 nkgyalsaeeeelrnkleqlekelnapa 127
                   +  ++a ++e +++le++++el++ +
  MMETSP1325-20131115|9683_1  33 AAREEVDAMRGEHSQRLEAVRRELEDDK 60 
                 4444455666677777777777777765 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00026
   PF13874.1  42 Qreevkqlrerlkeineklkelqkhdletskrieeakqkhqelshrllkvaakleilrnkgyalsaeeeelrnkleqlekelnapaqlkgrle 134
                  +e  + ++++++++++  +++ + ++e  +r ++a  ++++l    +++ a ++ +r++ ++++++e+  ++  ++l +  +++a++  r++
  MMETSP1325-20131115|9683_1  83 VAEVQARANTKIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATELSALTKAQRERLQSMKGTEASVESAEAALLEARKEMAEVHDRAQ 175
                 567778899*************************************************************99999999999888888888876 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   4.6   0.00096       1.1      49     163 ..      29     152 ..      18     159 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00096
   PF03234.9  49 eelekelkinkkllervdkllselkee.eelssekvlkklneeadkedkasveeeeeeqpkynemledL...ldqv.kdevdekk.....aaklieelkkhrkklkkeekelekkleelekeekk 163
                 ++l +++++ ++   + +++l+++++e e++++++++     +a++ ++   e+  e q++ n  ++dL   ++qv   +  e+k     a +   +l+   ++l++++k ++++l+ ++  e++
  MMETSP1325-20131115|9683_1  29 ASLAAAREEVDAMRGEHSQRLEAVRRElEDDKERALAAERGRAAEAAETHAAEKVAEVQARANTKIHDLqqaFEQVaA-AAAEAKsraaaAVEREAQLRITATELSALTKAQRERLQSMKGTEAS 152
                 567778888888888889999999999777777888888888888889988888888888888888887444777752.3333333555355556678888999999999999999999887765 PP

>> PF06148.6  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.7   0.00017       0.2      71     115 ..      24      68 ..      18      81 .. 0.85
   2 ?   -1.7   5.8       1.9   2.2e+03      85     131 ..     111     158 ..      74     187 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00017
   PF06148.6  71 leelesplaaarkkvesvrsklseveeeveskikekkdleeekel 115
                  ++le +laaar++v+++r + s++ e+v+ ++++ k+ + + e 
  MMETSP1325-20131115|9683_1  24 CAKLEASLAAAREEVDAMRGEHSQRLEAVRRELEDDKERALAAER 68 
                 67899*****************************99998877655 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 1.9
   PF06148.6  85 vesvrsklseveeeveskikekkdleeek.ellklllkldevvekled 131
                  +s  ++  e+e++++    e ++l++++ e l+++  ++++ve+ e+
  MMETSP1325-20131115|9683_1 111 AKSRAAAAVEREAQLRITATELSALTKAQrERLQSMKGTEASVESAEA 158
                 444444444455555555555555554444555555555555555554 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  10.3    0.0027       3.1      31     145 ..      33     170 ..      16     185 .. 0.62

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0027
   PF10186.4  31 nlkaeketlkkkveealeeaene....................kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle...asaqlekrraeqlaklqeeikrtksklnslesltaek 145
                   ++e ++++ + +++le    e                      +aa++ +  +a+ + +i+ +++  eq  ++  ++++r ++  e  aq+r +++   a ++ + +r +  ++ +++++ +++ l +  +++ae 
  MMETSP1325-20131115|9683_1  33 AAREEVDAMRGEHSQRLEAVRREleddkeralaaergraaeaaETHAAEKVAEVQARANTKIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATelsALTKAQRERLQSMKGTEASVESAEAALLEARKEMAEV 170
                 555555555555555555444445555555555555568777777777888888888888888888888888888888888888888888888877774434444444444444444455555555444444444444 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   3.8    0.0014       1.6      14      98 ..      29     138 ..      16     143 .. 0.82
   2 ?    6.1   1.7    0.0094        11      15      88 ..      93     179 ..      90     185 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0014
  PF00804.20  14 geiekisekveelkrlhsrilaspdpd.....................kqtkeeleeltaeikklankirskLksleqsie....qeegqnrssadlrirktqhstlsrk 98 
                   ++  +e v+ ++ +hs+ l +   +                     ++  e++ e +a+ +++++++++  +++    +    +     + +a+lri  t +s+l++ 
  MMETSP1325-20131115|9683_1  29 ASLAAAREEVDAMRGEHSQRLEAVRREleddkeralaaergraaeaaeTHAAEKVAEVQARANTKIHDLQQAFEQVAAAAAeaksRAAAAVEREAQLRITATELSALTKA 138
                 56677778888888888888888886666678888888888899999999************************9777744455688999999************99986 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0094
  PF00804.20  15 eiekisekveelkrlhsrilaspdpdkqtkeeleeltaeikklankirskLksleqsie.............qeegqnrssadlrir 88 
                  i  +++  e+++  + + ++   +  +++++l  +  e   l ++ r +L+s++ + +             +e  + + +a+l+ir
  MMETSP1325-20131115|9683_1  93 KIHDLQQAFEQVAAAAAEAKSRAAAAVEREAQLRITATELSALTKAQRERLQSMKGTEAsvesaeaallearKEMAEVHDRAQLQIR 179
                 68889999999999999988888877799************************9999433334444444444555555555555555 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   5.5      0.11   1.2e+02      85     175 ..      26     116 ..       8     129 .. 0.55
   2 ?   10.5   4.4   0.00026       0.3     101     170 ..     122     188 ..     118     189 .] 0.91

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.11
   PF04156.9  85 esesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelr....eeisdlkeevqelrselerlqedlq 175
                 ++e+ l+ + ee+++++    e +++le+++++le+++ e+   +er  ++e +   +a++++e++     +i dl++++++   ++++ + + +
  MMETSP1325-20131115|9683_1  26 KLEASLAAAREEVDAMRG---EHSQRLEAVRRELEDDK-ERALAAERGRAAEAAETHAAEKVAEVQaranTKIHDLQQAFEQVAAAAAEAKSRAA 116
                 566666666677766553...33344444444444444.44456666666666666666666666655555555555555554444444433333 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00026
   PF04156.9 101 eerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrselerl 170
                 e +l  + +el++l +++ + ++  k  e+++es+e ++ e++ke++e++    +++ +++el+ e+e++
  MMETSP1325-20131115|9683_1 122 EAQLRITATELSALTKAQRERLQSMKGTEASVESAEAALLEARKEMAEVH---DRAQLQIRELTVEVEQT 188
                 567788899*****************************************...88899999999988875 PP

>> PF06082.6  Bacterial putative lipoprotein (DUF940)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   8.3    0.0043       4.9     264     376 ..      44     158 ..       8     186 .. 0.60

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0043
   PF06082.6 264 a.........esldta.vrkvlaellakaglelerialdgdtltvele.nvkyrdeaealgrvarvlanalpasietfkivekenglplsevkvdreefaqlarleslpkaaaeltdatevsea 376
                 +         ++l+++  r+ +ae+ ++a  e+++ +++++ ++v+++ n+k++d ++a + va+ +a   +a+ +    ve+e++l+++ +++++ + aq +rl+s +  +a++++a+    a
  MMETSP1325-20131115|9683_1  44 EhsqrleavrRELEDDkERALAAERGRAA--EAAETHAAEKVAEVQARaNTKIHDLQQAFEQVAAAAA---EAKSRAAAAVEREAQLRITATELSALTKAQRERLQSMKGTEASVESAE----A 158
                 02333433333333331333334444433..44445555666677776459*********99998887...45556799*****************99999999999944444443332....2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1774  (0.129754); expected 273.4 (0.02)
Passed bias filter:                      514  (0.0375951); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                        29  (0.00212112); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.94u 0.32s 00:00:01.26 Elapsed: 00:00:00.64
# Mc/sec: 707.67
//
Query:       MMETSP1325-20131115|9680_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-08   32.5   3.2    0.00057   19.1   0.0    2.5  2  PF00612.22 IQ calmodulin-binding motif
  ------ inclusion threshold ------
       0.01   15.8   0.1      0.023   14.7   0.0    1.6  2  PF00373.13 FERM central domain


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   8.3e-08   0.00057       1      19 [.     245     263 ..     245     265 .. 0.93
   2 !   13.2   0.6   6.8e-06     0.047       3      17 ..     272     286 ..     271     288 .. 0.92

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 8.3e-08
                 HHHHHHHHHHHHHHHHHCH CS
  PF00612.22   1 rkaaikIQaawRgylaRkr 19 
                 ++aa++ Q+++Rg++ R+ 
  MMETSP1325-20131115|9680_1 245 ERAATTVQSFFRGFRIRRD 263
                 59***************97 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 6.8e-06
                 HHHHHHHHHHHHHHH CS
  PF00612.22   3 aaikIQaawRgylaR 17 
                 a+++IQa++Rg+ +R
  MMETSP1325-20131115|9680_1 272 AIVRIQAVFRGHSQR 286
                 89**********988 PP

>> PF00373.13  FERM central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   3.3e-06     0.023      73     126 .]       2      53 ..       1      53 [. 0.95
   2 ?   -2.3   0.0      0.61   4.2e+03      66      66 ..     159     159 ..     136     255 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 3.3e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00373.13  73 lpvsprllkkekskqleqrileahknvrglslaeaklkylqaaqslpdyGvslF 126
                 +p   ++l++++ + +e++i++   +++  sl+  k +y +a +++  yG ++F
  MMETSP1325-20131115|9680_1   2 IP--ANMLRQRRPDFWEREIAHRASKLSATSLIALKRQYVHATEQWGRYGHTFF 53 
                 55..7899999*****************************************99 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.61
                 x RF
  PF00373.13  66 e 66 
                 +
  MMETSP1325-20131115|9680_1 159 D 159
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       581  (0.0424956); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.56
# Mc/sec: 1240.97
//
Query:       MMETSP1325-20131115|9684_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 593.64
//
Query:       MMETSP1325-20131115|9685_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-05   23.9   0.0    1.7e-05   23.5   0.0    1.2  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   1.3e-09   1.7e-05     199     246 ..       2      46 ..       1      59 [. 0.84

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 1.3e-09
                 HHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG- CS
  PF00225.18 199 klneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsEras 246
                 ++n++S R H+i+ + + + +ke+ t     k +++  +DLAG E a 
  MMETSP1325-20131115|9685_1   2 QFNHQSTRGHCIMVLDVVMPDKEDPTM---KKRGRIYVCDLAGTEPAG 46 
                 68*****************98665444...579***********9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 404.09
//
Query:       MMETSP1325-20131115|9687_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|9676_1  [L=621]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-07   30.0   0.0    8.5e-07   28.9   0.0    1.7  1  PF00041.16 Fibronectin type III domain
     0.0015   17.4   4.8     0.0015   17.4   3.3    2.0  2  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
      0.089   12.5   1.7        0.2   11.3   1.2    1.6  1  PF12773.2  Double zinc ribbon


Domain annotation for each model (and alignments):
>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   1.9e-10   8.5e-07       6      85 .]       3      80 ..       1      80 [. 0.94

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 1.9e-10
                EEEECECSSEEEEEEE-BSHHSSTBSEEEEEEEEE-TTCCEEEEEECCTTSEEEEES--TT-EEEEEEEEEC---.---BE CS
  PF00041.16  6 lsvsevtstsltlsWsppkdgggpitgYeveyrekgggeewkeftvprtttsvtltgLkpgteYefrVqavngag.egpeS 85
                +++++v + s+tl W   +  +   + +e++ r + + + w   + p +++ +  ++L+p+t Y+frV++v ++g  + +S
  MMETSP1325-20131115|9676_1  3 VRATNVDHESVTLMWVCNE--RMAPVTFELQIRLVHELG-WPKSSQPLNSYACRKKNLQPNTAYQFRVRSVFANGnASAWS 80
                899***************7..**************9999.*******************************9998677666 PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       0.4   1.8e+03       4       8 ..      16      20 ..      14      21 .. 0.81
   2 !   17.4   3.3   3.4e-07    0.0015       5      28 ..     174     197 ..     173     198 .. 0.97

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.4
  PF00641.13  4 dWdCs 8 
                +W C+
  MMETSP1325-20131115|9676_1 16 MWVCN 20
                8***7 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 3.4e-07
  PF00641.13   5 WdCskClvqNfawstkCvaCqapk 28 
                 WdC +C+ +N+a+++ C  C+a++
  MMETSP1325-20131115|9676_1 174 WDCAVCSRDNKASAQSCRVCGAKR 197
                 **********************98 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.2   4.4e-05       0.2       1      23 [.     176     198 ..     176     229 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4.4e-05
   PF12773.2   1 CpqCgaenpsgarfCpqCgaklk 23 
                 C+ C ++n+++a+ C  Cgak +
  MMETSP1325-20131115|9676_1 176 CAVCSRDNKASAQSCRVCGAKRN 198
                 999****************9977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2119  (0.154988); expected 273.4 (0.02)
Passed bias filter:                      503  (0.0367905); expected 273.4 (0.02)
Passed Vit filter:                       138  (0.0100936); expected 13.7 (0.001)
Passed Fwd filter:                        69  (0.00504681); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 3.01u 0.44s 00:00:03.45 Elapsed: 00:00:01.41
# Mc/sec: 1055.42
//
Query:       MMETSP1325-20131115|9689_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.41s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 988.50
//
Query:       MMETSP1325-20131115|9690_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.3   0.0       0.14   11.0   0.0    1.1  1  PF08893.5 Domain of unknown function (DUF1839)


Domain annotation for each model (and alignments):
>> PF08893.5  Domain of unknown function (DUF1839)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   9.9e-06      0.14     140     184 ..      49      93 ..      38      96 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 9.9e-06
   PF08893.5 140 YfHnsGyhelegedydglfrlaeelsekdalllpyvevvkreeka 184
                 + Hn G  + eg+dy  lfr++ ++ + ++ l  y+   + +++a
  MMETSP1325-20131115|9690_1  49 WLHNLGIKSGEGDDYVELFRQEFAVIKIEHGLRNYIARFRARKAA 93 
                 57**********************999999999999888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:01.17
# Mc/sec: 198.67
//
Query:       MMETSP1325-20131115|9686_1  [L=234]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0024   18.2   0.0      0.013   15.9   0.0    2.2  1  PF09392.5  Type III secretion needle MxiH like
  ------ inclusion threshold ------
       0.13   12.2   0.6       0.26   11.3   0.3    1.6  1  PF01986.11 Domain of unknown function DUF123


Domain annotation for each model (and alignments):
>> PF09392.5  Type III secretion needle MxiH like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.8e-06     0.013       6      52 ..      45      91 ..      29     231 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 1.8e-06
                XXXXXXXXXX.......XXXXXXXXXXXXXXXXX...........XX CS
   PF09392.5  6 qamkvaqahsaagagntyaeisaaldaakaaarasasevtstasvsd 52
                + m +a+a+ +a  +++ ae+ +a+  a+aa  ++as+v+++a++++
  MMETSP1325-20131115|9686_1 45 NEMAEAEAAYEAEKRRWHAELLKASRRAEAAEVQLASQVETAAQSNS 91
                4677788888*****************************88887765 PP

>> PF01986.11  Domain of unknown function DUF123
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   3.8e-05      0.26      35      77 ..      55      94 ..      25     110 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 3.8e-05
  PF01986.11 35 kekklrWHiDyLlekkeaeiaevvviesekrleealakalekl 77
                + +k+rWH   L+ +++ae aev      +++e+a  ++  ++
  MMETSP1325-20131115|9686_1 55 EAEKRRWHAELLKASRRAEAAEVQ---LASQVETAAQSNSLST 94
                36889**************99994...4444444444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1045  (0.0764336); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.44s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|9691_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 230.76
//
Query:       MMETSP1325-20131115|9692_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        4.5    7.0   9.9        9.9    6.0   6.8    1.6  1  PF04554.8 Extensin-like region


Domain annotation for each model (and alignments):
>> PF04554.8  Extensin-like region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   6.8   0.00072       9.9      10      47 ..      70     116 ..      60     124 .. 0.57

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00072
   PF04554.8  10 ekssPpppyvyksPPPpsp........ykYksPPPpvy.kyksPpPp 47 
                 + + P+ + vy+s PP +           Y++P P  +   + P+Pp
  MMETSP1325-20131115|9692_1  70 QLEPPQSQQVYHSSPPSQQvsgkaafqAAYQQPMPSQQaAAEAPAPP 116
                 33336666888888888332345555555666666433023456665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 831.39
//
Query:       MMETSP1325-20131115|9693_1  [L=312]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 1557.63
//
Query:       MMETSP1325-20131115|9695_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|9696_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 294.55
//
Query:       MMETSP1325-20131115|9697_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.0   3.5      0.012   14.9   2.4    1.0  1  PF02731.10 SKIP/SNW domain
       0.15   12.6   2.3       0.16   12.5   1.6    1.1  1  PF11653.3  Bacteriophage T7 virion assembly protein
        2.4    7.3   8.2        2.1    7.5   5.7    1.1  1  PF12090.3  Spt20 family
        3.4    7.0  10.9        4.1    6.8   7.6    1.2  1  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF02731.10  SKIP/SNW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   2.4   3.5e-06     0.012     107     146 ..      30      69 ..      11      70 .] 0.78

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 3.5e-06
  PF02731.10 107 faklseaLeeadkkareeikqraelkkelaekekeekeek 146
                 +++l +a+++  ++a  ++ q+++++++++++++++++++
  MMETSP1325-20131115|9697_1  30 MMSLPTAMQTNARQAHAQVVQQQQQQQQQQQQQQQQQQQQ 69 
                 456779************9999999999988888888775 PP

>> PF11653.3  Bacteriophage T7 virion assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.6   4.8e-05      0.16      16      69 ..      12      65 ..       5      70 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.8e-05
   PF11653.3 16 vekvakevkkaagGllGggedkakeveakvPvaaaqvvevPkdkveteDeaqte 69
                v  +a + ++a +G + g +  +  +++++ +a aqvv+  +++ +++ ++q +
  MMETSP1325-20131115|9697_1 12 VAPPAAGLNQAQAGQVFGMMSLPTAMQTNARQAHAQVVQQQQQQQQQQQQQQQQ 65
                5556788899*****************************998777776666654 PP

>> PF12090.3  Spt20 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   5.7   0.00063       2.1      94     109 ..      45      67 ..      10      70 .] 0.52

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00063
   PF12090.3  94 e.......saeneqqaktqkskn 109
                 +       +++++qq+++q++++
  MMETSP1325-20131115|9697_1  45 HaqvvqqqQQQQQQQQQQQQQQQ 67 
                 02233211222222222222222 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   7.6    0.0012       4.1      20      46 ..      42      68 ..      26      70 .] 0.67

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0012
  PF04977.10 20 yqlkqeiaalqaelaklkaeneeLeae 46
                +q +++++++q++ +++++++++ +++
  MMETSP1325-20131115|9697_1 42 RQAHAQVVQQQQQQQQQQQQQQQQQQQ 68
                566666666666666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3388  (0.247806); expected 273.4 (0.02)
Passed bias filter:                     1356  (0.0991808); expected 273.4 (0.02)
Passed Vit filter:                       184  (0.0134582); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.46s 00:00:00.95 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|9698_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 768.83
//
Query:       MMETSP1325-20131115|9700_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-11   42.8   0.2     0.0086   15.8   0.0    3.4  3  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   7.9e-07     0.011       5      39 .]      48      83 ..      46      83 .. 0.94
   2 !    7.8   0.1    0.0002       2.8      16      39 .]     102     126 ..      97     126 .. 0.93
   3 !   15.8   0.0   6.3e-07    0.0086       8      39 .]     144     176 ..     139     176 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 7.9e-07
                EEEESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  5 atlrgHtspVtcvafspd.gpllasgSrDgtirlWd 39
                + +++H +pV  ++ sp  ++l++s ++D ++rl++
  MMETSP1325-20131115|9700_1 48 TRYDAHAGPVLGLDASPFhRHLFLSTGADASLRLYS 83
                5689*****************************996 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0002
                 EEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27  16 cvafspd.gpllasgSrDgtirlWd 39 
                 + a+s++ ++++a + ++g+++l+d
  MMETSP1325-20131115|9700_1 102 SAAWSHTrPTVFAAAAANGSVYLYD 126
                 789********************98 PP

  == domain 3    score: 15.8 bits;  conditional E-value: 6.3e-07
                 ESSSSSEEEEEEESS.STEEEEEETTSEEEEEE CS
  PF00400.27   8 rgHtspVtcvafspd.gpllasgSrDgtirlWd 39 
                 +g  +++ +vaf+p  +++la+g ++g +++W+
  MMETSP1325-20131115|9700_1 144 TGPAGAILAVAFNPRmRSFLACGDANGFVHVWN 176
                 678899**************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 990.19
//
Query:       MMETSP1325-20131115|9699_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       753  (0.0550761); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.42s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 843.33
//
Query:       MMETSP1325-20131115|9703_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-13   50.9   0.3    1.2e-13   50.8   0.2    1.0  1  PF02779.19 Transketolase, pyrimidine binding domain


Domain annotation for each model (and alignments):
>> PF02779.19  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   0.2   8.8e-18   1.2e-13      63     134 ..       1      74 []       1      74 [] 0.98

  Alignments for each domain:
  == domain 1    score: 50.8 bits;  conditional E-value: 8.8e-18
                 HH---TTCGTSEEEEEECEHHHHG....HHGGHHHHHHHHHHTT---E.EEEEEE--------TSS-SSHHHHHC CS
  PF02779.19  63 favGaalagpllviweaqfgdFangA..qiyadqairsgeakgklpvg.vvtrlpigvgedGpehqsaeleaflr 134
                 fa+G+a  g ++ i+e+qf+d++  A  qi++++a+ +++++ ++ vg +++r+p+g+ + G   +s+++ea+++
  MMETSP1325-20131115|9703_1   1 FAIGYASMG-KTAIAEIQFADYIFPAfdQIVNEAAKYRYRSGNEFDVGgLTFRTPCGAVGHGGHYHSQSPEAYFA 74 
                 89*******.5**************************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 311.11
//
Query:       MMETSP1325-20131115|9704_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0075   15.7   0.1       0.42   10.1   0.0    2.8  3  PF12799.2 Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   3.1e-05      0.42       3      27 ..      41      66 ..      19      67 .. 0.62
   2 ?   -3.3   0.0      0.49   6.8e+03       8      18 ..      75      86 ..      75      92 .. 0.65
   3 !    2.5   0.1    0.0076     1e+02      11      25 ..     128     143 ..     126     158 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 3.1e-05
   PF12799.2  3 LevLdLsnNnIk.dlppelanLpnLk 27
                 ++LdL +N+I    p el+ ++ L+
  MMETSP1325-20131115|9704_1 41 VTSLDLGRNSIDgTMPTELGYMTALE 66
                35666666666644565666666666 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 0.49
   PF12799.2  8 LsnNnIk.dlpp 18
                L++N++   +p 
  MMETSP1325-20131115|9704_1 75 LAKNSLNgAIPT 86
                678888744665 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.0076
   PF12799.2  11 NnIkd.lppelanLpn 25 
                 NnI++ +p el+n+ n
  MMETSP1325-20131115|9704_1 128 NNISStIPTELGNFEN 143
                 8999559999**9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 797.16
//
Query:       MMETSP1325-20131115|9706_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-14   52.8   0.0    4.2e-14   52.7   0.0    1.0  1  PF00621.15 RhoGEF domain


Domain annotation for each model (and alignments):
>> PF00621.15  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.0     3e-18   4.2e-14       1      91 [.      10     114 ..      10     117 .] 0.94

  Alignments for each domain:
  == domain 1    score: 52.7 bits;  conditional E-value: 3e-18
                 HHHHHHHHHHHHHHHHHHHHHHTHHHHHHC............TSS-HHHHH..HHS.TTHHHHHHHHHHHHHHHHHHHH--------HHHHHHHH-HHHHHHHHH CS
  PF00621.15   1 vieElietErsYvrdLevlvevyieplkes...........ksilseeeik..siF.snieeilklhkeflekLeerlkekkdaqkigdvflkleeflkvYseYi 91 
                 ++eEl++tE++Yv+ L+ l e++ +p+ ++             + se+++   s+F   + +i  ++ + +++L er++ + d +++gdvf+kl++++ +Ys+Y 
  MMETSP1325-20131115|9706_1  10 IAEELFSTEKTYVNMLTSLREIFTDPMLADaearvpkigkiCRLTSEDKLTsmSVFlTSVRQIQTVNAQVFQELYERINGWTDDRTLGDVFIKLAPLFPMYSTYS 114
                 679*************************99*********99889899987755699789*********************************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.56
# Mc/sec: 500.67
//
Query:       MMETSP1325-20131115|9707_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 604.08
//
Query:       MMETSP1325-20131115|9708_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-08   34.3   0.0    1.2e-08   34.1   0.0    1.1  1  PF00202.16 Aminotransferase class-III


Domain annotation for each model (and alignments):
>> PF00202.16  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.0   8.4e-13   1.2e-08       3      51 ..      37      85 ..      35     101 .. 0.87

  Alignments for each domain:
  == domain 1    score: 34.1 bits;  conditional E-value: 8.4e-13
                EEEETTEEEETT--EEEBTTHHHHTT------HHHHHHHHHHHCC-S-- CS
  PF00202.16  3 tkakGvyltdvdGrrylDflsgiavvnlGhahpkiveavkeqadklshv 51
                ++ kG+y  dvd+++y+D +  +  ++ Gha  ++++a+keq++k +  
  MMETSP1325-20131115|9708_1 37 DRVKGAYAFDVDDNKYIDYVGTWGPAICGHADDEVLDALKEQMEKGTSF 85
                6889****************************************99874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 461.19
//
Query:       MMETSP1325-20131115|9709_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 388.84
//
Query:       MMETSP1325-20131115|9710_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-15   57.5   0.0    1.5e-15   57.1   0.0    1.1  1  PF00488.16 MutS domain V


Domain annotation for each model (and alignments):
>> PF00488.16  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.0   1.1e-19   1.5e-15     123     229 ..       2     103 ..       1     108 [. 0.93

  Alignments for each domain:
  == domain 1    score: 57.1 bits;  conditional E-value: 1.1e-19
                 TSEEEEE-------ST---HHHHHHHHHHHHC.T-EEEEE-S-CCCCCHHHHSTTEEEEEEEEEEESSEEEEEEEEE----S-----HHHHHTT--HHHHHHHHHHH CS
  PF00488.16 123 ksLvilDElGRGtstydGlaialavlehllekvkaktlfatHyheltklaekleevknlhlavkeededlvflykvkegaaeksyGikvaelaglPesvveeakevl 229
                 ++Lv++DE+G Gt  ++G+aia++ le lle + +++ ++tHy +l +la++ ++ + + ++ ++       +y+++ g   +s+ i+vae  +lP+ vv++a++ l
  MMETSP1325-20131115|9710_1   2 RTLVLMDEMGSGTDPAQGVAIAQSLLEALLE-TGSRCGITTHYLQLKELASTDSRFEVAGMEFVDGRP----TYRLQYGFVGESHAISVAERLELPKVVVDRARDLL 103
                 68****************************9.699*********************999999986654....689999*************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 739.30
//
Query:       MMETSP1325-20131115|9711_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 340.53
//
Query:       MMETSP1325-20131115|9705_1  [L=708]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.02u 0.37s 00:00:01.39 Elapsed: 00:00:00.65
# Mc/sec: 2610.19
//
Query:       MMETSP1325-20131115|9714_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.14   10.9   0.0       0.17   10.6   0.0    1.0  1  PF04950.7 Protein of unknown function (DUF663)


Domain annotation for each model (and alignments):
>> PF04950.7  Protein of unknown function (DUF663)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   1.2e-05      0.17     234     280 ..      20      66 ..      17      70 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 1.2e-05
   PF04950.7 234 talvrymFfnsedvewFkpvelftksGrrGriKealgthGafkatFd 280
                 t++v   F  +edv+   ++ +   +G +G    + g+ G+ k tF+
  MMETSP1325-20131115|9714_1  20 TVIVDGLFGPEEDVKPHTGAAVTAENGDTGVLAGPFGKAGKCKVTFE 66 
                 7788889999************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|9715_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0038   15.8   0.9     0.0055   15.3   0.6    1.3  1  PF12777.2  Microtubule-binding stalk of dynein motor
     0.0057   16.3   2.0     0.0057   16.3   1.4    1.7  2  PF06009.7  Laminin Domain II
  ------ inclusion threshold ------
      0.044   12.9   0.4      0.063   12.4   0.3    1.3  1  PF06037.6  Bacterial protein of unknown function (DUF922)
        1.8    8.0   7.1        3.4    7.1   4.9    1.5  1  PF08657.5  DASH complex subunit Spc34
        2.4    7.6   4.7        1.2    8.5   0.2    2.3  2  PF06305.6  Protein of unknown function (DUF1049)
        3.7    7.0   7.6       0.72    9.3   2.6    1.8  2  PF03962.10 Mnd1 family
        5.7    6.6  12.3        1.9    8.2   5.7    2.3  2  PF12329.3  TATA element modulatory factor 1 DNA binding
        7.6    6.1  10.4       0.97    9.0   3.8    1.9  2  PF06625.6  Protein of unknown function (DUF1151)


Domain annotation for each model (and alignments):
>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.6   3.2e-06    0.0055     220     267 ..     113     160 ..      99     208 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 3.2e-06
   PF12777.2 220 rqalekanaelaaaqeklaaikakiaelnanlaeltarfekatadklk 267
                 + al+ ++ +l+aaq+ l++ + ki el++ +a+ ++++e+ t+++l 
  MMETSP1325-20131115|9715_1 113 QAALRTTQRKLNAAQKELSTAQGKIRELEKLVAQQASKLERQTTQRLD 160
                 57899999************************************9985 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.7   2.9e+03      56      62 ..      31      37 ..      16      62 .. 0.53
   2 !   16.3   1.4   3.3e-06    0.0057      32      83 ..     108     159 ..      94     167 .. 0.83

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 1.7
                XXXXXXX CS
   PF06009.7 56 darrsvr 62
                +a rs +
  MMETSP1325-20131115|9715_1 31 EATRSAS 37
                2333333 PP

  == domain 2    score: 16.3 bits;  conditional E-value: 3.3e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF06009.7  32 klsklngsveetnekvksankavrdarrsvrkleklapqlldkLkklkklee 83 
                 ++ ++++ ++ t+ k+++a+k +  a+ ++r+lekl+ q ++kL++  +++ 
  MMETSP1325-20131115|9715_1 108 NATETQAALRTTQRKLNAAQKELSTAQGKIRELEKLVAQQASKLERQTTQRL 159
                 556677778888889*****************************98766665 PP

>> PF06037.6  Bacterial protein of unknown function (DUF922)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   3.7e-05     0.063      61     149 ..      72     163 ..      45     170 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.7e-05
   PF06037.6  61 ikytlPklkerrkldpevklvWdtfladikrHEevHgeiakdma.reiekalkglapdpsC..eklraevekrlqevlaeheraqrefDrvE 149
                 +++  P  ++++++++  +++W  + a++ + E vH ++  ++a r ++++l++ +++ s    k+r+  + ++q+ ++  ++  ++ D+ E
  MMETSP1325-20131115|9715_1  72 VSVREPASASPASVAQSSNQRWMGLGAALAQVEPVHNATETQAAlRTTQRKLNAAQKELSTaqGKIRELEKLVAQQASKLERQTTQRLDESE 163
                 5566688899999***********************98866554144444444443333221135666666677777777788888888766 PP

>> PF08657.5  DASH complex subunit Spc34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   4.9     0.002       3.4     179     226 ..     107     164 ..      15     185 .. 0.70

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.002
   PF08657.5 179 l..........gakekieklrqkyeelseeiaeleeeiaeqkdqLeklnksesskssd 226
                            +++ k+++ +++    + +i+ele+ +a+q  +Le++     ++s+ 
  MMETSP1325-20131115|9715_1 107 HnatetqaalrTTQRKLNAAQKELSTAQGKIRELEKLVAQQASKLERQTTQRLDESEI 164
                 4455555555578999******************************997766665443 PP

>> PF06305.6  Protein of unknown function (DUF1049)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2   0.00069       1.2      30      66 ..      96     132 ..      93     134 .. 0.80
   2 ?    0.3   0.4      0.25   4.2e+02      49      67 ..     136     154 ..     132     157 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00069
   PF06305.6  30 lGallglLlsvlfllklrrqlrrlqkqlkklekeldq 66 
                 lGa+l+ +  v +   ++ +lr  q++l++++kel++
  MMETSP1325-20131115|9715_1  96 LGAALAQVEPVHNATETQAALRTTQRKLNAAQKELST 132
                 66666666666777889*****************987 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.25
   PF06305.6  49 qlrrlqkqlkklekeldql 67 
                 ++r+l+k +++++ +l+++
  MMETSP1325-20131115|9715_1 136 KIRELEKLVAQQASKLERQ 154
                 7999999998888888765 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       0.7   1.2e+03      97     106 ..      28      40 ..       9      94 .. 0.54
   2 ?    9.3   2.6   0.00042      0.72      62     105 ..     114     158 ..     107     204 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.7
  PF03962.10  97 kkreet...eere 106
                 +k e t   + r+
  MMETSP1325-20131115|9715_1  28 QKAEATrsaSSRR 40 
                 3333331111222 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00042
  PF03962.10  62 eakkklkteleklkkeleelkqrikelqaeiekekkkreet.eer 105
                  a ++ +++l++++kel+ ++ +i el++ ++++++k e + ++r
  MMETSP1325-20131115|9715_1 114 AALRTTQRKLNAAQKELSTAQGKIRELEKLVAQQASKLERQtTQR 158
                 67889999**********************999988877663222 PP

>> PF12329.3  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       2.6   4.5e+03      58      71 ..      18      31 ..      14      35 .. 0.58
   2 ?    8.2   5.7    0.0011       1.9      25      67 ..     110     155 ..     102     163 .. 0.74

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 2.6
   PF12329.3 58 klekeleeleerlk 71
                ++e+e+  l ++++
  MMETSP1325-20131115|9715_1 18 EVEAEVLTLAQKAE 31
                55555555555554 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0011
   PF12329.3  25 skkelkhnntikkLrkknkele...keieelkkkleklekeleele 67 
                   +++++++t++kL++ +kel     +i+el+k ++++ ++le+ +
  MMETSP1325-20131115|9715_1 110 TETQAALRTTQRKLNAAQKELStaqGKIRELEKLVAQQASKLERQT 155
                 5688899999999999888888555667777788888888887654 PP

>> PF06625.6  Protein of unknown function (DUF1151)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.85   1.5e+03      46      65 ..      25      42 ..      16      66 .. 0.58
   2 ?    9.0   3.8   0.00057      0.97      47     109 ..     106     167 ..     100     170 .. 0.76

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 0.85
   PF06625.6 46 vleqKpELqrvlekrkedqv 65
                +l qK+E  r    r+  +v
  MMETSP1325-20131115|9715_1 25 TLAQKAEATRSASSRR--HV 42
                4556666666655555..33 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00057
   PF06625.6  47 leqKpELqrvlekrkedqvlkeqkeeeeakklkselekellkraqkleelelekakekeeeeq 109
                 +++ +E q +l   +++  +++++  + a+ +  elek + ++a kle    ++ +e+e e+q
  MMETSP1325-20131115|9715_1 106 VHNATETQAALRTTQRKLNAAQKELST-AQGKIRELEKLVAQQASKLERQTTQRLDESEIERQ 167
                 567789999998887555555555555.555588**************999888887777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1416  (0.103569); expected 273.4 (0.02)
Passed bias filter:                      719  (0.0525892); expected 273.4 (0.02)
Passed Vit filter:                       100  (0.00731422); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.53
# Mc/sec: 944.98
//
Query:       MMETSP1325-20131115|9718_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 268.39
//
Query:       MMETSP1325-20131115|9719_1  [L=402]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-16   61.2   0.0    9.3e-16   58.1   0.0    2.3  2  PF00005.22 ABC transporter
    1.1e-09   38.6   1.4    0.00014   21.7   0.0    2.7  3  PF13304.1  AAA domain
    4.7e-07   29.4  15.4    4.7e-07   29.4  10.7    2.9  2  PF12848.2  ABC transporter
    2.2e-05   23.6   5.7      0.029   13.4   0.0    3.5  4  PF02463.14 RecF/RecN/SMC N terminal domain
     0.0014   19.0   0.4     0.0053   17.1   0.0    2.1  2  PF08477.8  Miro-like protein
     0.0017   17.4   0.0     0.0046   16.0   0.0    1.7  1  PF03193.11 Protein of unknown function, DUF258
     0.0018   17.6   0.0     0.0036   16.6   0.0    1.4  1  PF13555.1  P-loop containing region of AAA domain
      0.002   18.0   0.1     0.0074   16.1   0.0    2.1  2  PF01926.18 50S ribosome-binding GTPase
     0.0025   17.8   0.1      0.019   14.9   0.0    2.4  2  PF13401.1  AAA domain
     0.0039   17.8   7.2     0.0069   17.0   1.1    3.3  2  PF13207.1  AAA domain
     0.0043   15.4   0.0     0.0043   15.4   0.0    2.5  3  PF13166.1  AAA domain
     0.0095   15.9   0.1      0.076   13.0   0.0    2.5  2  PF00910.17 RNA helicase
  ------ inclusion threshold ------
      0.011   15.4   2.3      0.032   13.9   0.0    2.4  2  PF00350.18 Dynamin family
      0.011   15.4   0.8       0.11   12.2   0.0    2.6  3  PF13671.1  AAA domain
      0.017   14.5   1.6        4.6    6.6   0.6    2.4  2  PF13479.1  AAA domain
      0.022   13.8   0.1      0.056   12.5   0.0    1.7  2  PF12846.2  AAA-like domain
      0.024   14.8   0.0      0.024   14.8   0.0    2.6  2  PF13476.1  AAA domain
      0.027   14.2   1.6      0.097   12.4   0.1    2.6  1  PF13558.1  Putative exonuclease SbcCD, C subunit
      0.038   13.7   2.2        0.2   11.3   0.0    2.4  3  PF01935.12 Domain of unknown function DUF87
       0.05   13.1   0.1       0.12   11.9   0.0    1.7  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
      0.085   12.3   0.0       0.22   11.0   0.0    1.7  1  PF05729.7  NACHT domain
       0.53   10.4   0.0       0.53   10.4   0.0    3.5  4  PF13238.1  AAA domain
        2.2    8.5   6.0       0.62   10.3   0.1    3.0  2  PF13191.1  AAA ATPase domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2       1.7     1e+03      30      57 ..      78     108 ..      33     143 .. 0.56
   2 !   58.1   0.0   1.6e-18   9.3e-16       1     118 []     194     301 ..     194     301 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 1.7
                 B-HHHHH..EEEE-------..--BHHHHHH CS
                 xxxxxxx..xxxxxxxxxxx.xxxxxxxxxx RF
  PF00005.22  30 dkleklr..igyipqdpllf.peltvrenld 57 
                 +k+ + +   g++++++++  + ++vre+  
  MMETSP1325-20131115|9719_1  78 QKAIRAKkaSGVTKKKAMEEvRTKKVREQGG 108
                 2222222444555555555544444444333 PP

  == domain 2    score: 58.1 bits;  conditional E-value: 1.6e-18
                 HHHHHHHTTSS------EEE-...--BGGGB-HHHHHEEEE-------...--BHHHHHH----S--.-HHHHHHHHHH---HHHH------------HHHHHHHHHHTT--SEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00005.22   1 STLlklltgelkptegeievd.ndrkdlesdkleklrigyipqdpllf..peltvrenldmakeekk.tdkrieevlekvgldelldksrvstLSgGqkqrvalArallkkpklllLDEPtn 118
                 ST +klltgel+pt+gei+++ +            lr+g+  q+  +    + +    l+  + +++ + + +++ l k+gl++++++  ++ LSgGqk rv+ + + l +p+ll LDEPtn
  MMETSP1325-20131115|9719_1 194 STFIKLLTGELQPTTGEIKRNpR------------LRVGVYDQHFVDRlpMDESPVVYLR--RLFNDlDYQSCRNKLGKFGLEGHAHEICMRDLSGGQKARVVFCELSLLQPHLLFLDEPTN 301
                 9********************33............55********999643333322222..2222247899************99999********************************8 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.6   1.6e+03     288     302 ..      20      34 ..       3     120 .. 0.66
   2 !   14.4   0.6   4.1e-05     0.024       3      20 ..     184     201 ..     183     217 .. 0.86
   3 !   21.7   0.0   2.4e-07   0.00014     187     302 ..     217     332 ..     206     333 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 2.6
   PF13304.1 288 ggsQlifTTHSpvll 302
                 ++ +l++++H+  +l
  MMETSP1325-20131115|9719_1  20 WKKTLLIVSHDQDFL 34 
                 444444444443333 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 4.1e-05
   PF13304.1   3 viiGpNgsGKSnlLkald 20 
                 +++G NgsGKS+++k l 
  MMETSP1325-20131115|9719_1 184 CVVGNNGSGKSTFIKLLT 201
                 79*************995 PP

  == domain 3    score: 21.7 bits;  conditional E-value: 2.4e-07
   PF13304.1 187 llikgiddleielsdlkkvlklsllidedllek......dviflkkgdggelplsdlSdGtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHSpvll 302
                 l++  +d  + +   +++    +l++ +++l++        +f  +g+  e+ ++dlS G+k     ++ l  + +   +l++DEp n+L+ + + +l e ++  +     ++++TH+  l+
  MMETSP1325-20131115|9719_1 217 LRVGVYDQHFVDRLPMDESPVVYLRRLFNDLDYqscrnkLGKFGLEGHAHEICMRDLSGGQKAR-VVFCELSLLQP--HLLFLDEPTNNLDIESIDALSEAINAYEG---GMVVVTHDARLI 332
                 55555555555555566666666677777777788888899999********************.66666666655..99**********************99988...999999998887 PP

>> PF12848.2  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4  10.7   7.8e-10   4.7e-07       1      76 [.      42     133 ..      42     142 .. 0.71
   2 ?    0.6   1.6      0.77   4.6e+02      23      60 ..     359     391 ..     342     399 .. 0.47

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 7.8e-10
   PF12848.2   1 velengklteYkGnYseyleqkeerleqqekayekqqkeikkleef.Idrfraka...............skakqaqsrekalekmeriekp 76 
                 ++++++kl +YkGnY+++ e  +++++qq+ka e+qqk i+  ++  + + +a +               +ka ++ s +   e  e i++p
  MMETSP1325-20131115|9719_1  42 LHIDDQKLLSYKGNYDTFKELEKQKRDQQQKAWEQQQKAIRAKKASgVTKKKAMEevrtkkvreqggskkKKADAVASGQETAEVQELIKRP 133
                 69*************************************98777653777777445666545555554444444555555555555555555 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.77
   PF12848.2  23 eerleqqekayekqqkeikkleefIdrfrakaskakqa 60 
                 ee l++   + e++q++i   ++  +r +a  ++a  a
  MMETSP1325-20131115|9719_1 359 EELLRRLDVQMEAEQARI---QANLERKAA--KRAEEA 391
                 333333333344444433...333333333..222222 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.3   7.8e+02     170     210 ..       4      43 ..       2      49 .. 0.79
   2 ?   -1.6   0.4       1.9   1.1e+03      51      83 ..      76     107 ..      74     147 .. 0.56
   3 !   10.9   0.0    0.0003      0.18      27      42 ..     183     198 ..     170     205 .. 0.86
   4 !   13.4   0.0   4.8e-05     0.029     131     213 ..     267     343 ..     247     348 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 1.3
                 T--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-.SEEE- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx RF
  PF02463.14 170 aLDeknvskvaellkeksknaQfivislreemleka.dklvg 210
                 +LD + v  + ++l++ +    ++++s+++++l+ + ++++ 
  MMETSP1325-20131115|9719_1   4 HLDLNAVIWLDDYLQKWK--KTLLIVSHDQDFLNSVcQEILH 43 
                 799999999999999888..568999***9999876455555 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.9
                 ---.-------TTSS----------EEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14  51 ksakklrseklsdlihkskskakvksaeveitf 83 
                 +++k++r++k+s + +k k+ ++v   +v    
  MMETSP1325-20131115|9719_1  76 QQQKAIRAKKASGVTKK-KAMEEVRTKKVREQG 107
                 56788888888888877.666666666666544 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 0.0003
                 EEE--------HHHHH CS
                 xxxxxxxxxxxxxxxx RF
  PF02463.14  27 taivGpNGSGKsnvld 42 
                  ++vG+NGSGKs ++ 
  MMETSP1325-20131115|9719_1 183 ICVVGNNGSGKSTFIK 198
                 589*********9985 PP

  == domain 4    score: 13.4 bits;  conditional E-value: 4.8e-05
                 T--TTG-----HHHHHHHHHHH.HHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEEE--EE CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF02463.14 131 giskelLSgGektLvalaLlfA.iqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadklvgvtk 213
                 +i +  LSgG+k+ v    +f  +   +p+ l +lDe   +LD + + +++e +++ +    ++v++++++++e  ++++ v  
  MMETSP1325-20131115|9719_1 267 EICMRDLSGGQKARV----VFCeLSLLQPH-LLFLDEPTNNLDIESIDALSEAINAYE--GGMVVVTHDARLIEATESVLWVVE 343
                 677788******844....44412344555.6779********************999..899************999988876 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       4.1   2.4e+03      33      41 ..      84      92 ..      47     129 .. 0.55
   2 !   17.1   0.0   8.9e-06    0.0053       1      25 [.     182     206 ..     182     230 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 4.1
   PF08477.8 33 ikgdtlavk 41
                 k +++++k
  MMETSP1325-20131115|9719_1 84 KKASGVTKK 92
                223333333 PP

  == domain 2    score: 17.1 bits;  conditional E-value: 8.9e-06
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefp 25 
                 ++ vvG+ g+GKs++++ l+ge +p
  MMETSP1325-20131115|9719_1 182 RICVVGNNGSGKSTFIKLLTGELQP 206
                 799**************99998887 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   7.8e-06    0.0046      36      69 ..     181     214 ..     160     220 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 7.8e-06
                 SBEEEE-------HHHHHHH--------S----- CS
  PF03193.11  36 ktsvlvGqSGvGKSsLinallpeldlkvgevsek 69 
                 + +++vG+ G GKS++i+ l++el+  +ge++++
  MMETSP1325-20131115|9719_1 181 SRICVVGNNGSGKSTFIKLLTGELQPTTGEIKRN 214
                 45689**************************875 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   6.1e-06    0.0036      13      40 ..     171     197 ..     169     212 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 6.1e-06
   PF13555.1  13 dghtveidpkgkntlltGasGsGKSTll 40 
                 d+ +  id+++    ++G++GsGKST++
  MMETSP1325-20131115|9719_1 171 DNLDCGIDMDS-RICVVGNNGSGKSTFI 197
                 55556677776.899***********98 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       6.5   3.9e+03      45      45 ..     102     102 ..      69     159 .. 0.56
   2 !   16.1   0.0   1.2e-05    0.0074       1      37 [.     182     231 ..     182     369 .. 0.62

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 6.5
                 T CS
  PF01926.18  45 e 45 
                 +
  MMETSP1325-20131115|9719_1 102 K 102
                 0 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 1.2e-05
                 EEEEE--TT---HHHHHHHHC.........ST....CTEETS-TT-SSSE CS
  PF01926.18   1 evaivGrpNvGKStLinaLtg.........ek....aakvsdypgtTrdi 37 
                 ++++vG+  +GKSt+i+ Ltg         ++    ++ v+d++++ r +
  MMETSP1325-20131115|9719_1 182 RICVVGNNGSGKSTFIKLLTGelqpttgeiKRnprlRVGVYDQHFVDRLP 231
                 699*****************722222222211233333455555555555 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       2.2   1.3e+03      89     110 ..      40      62 ..      17      94 .. 0.52
   2 !   14.9   0.0   3.2e-05     0.019       7     122 ..     183     325 ..     179     334 .. 0.67

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 2.2
   PF13401.1  89 rlliiDEaqrLs.eealeelrsl 110
                 ++l iD+   Ls +  +++++ l
  MMETSP1325-20131115|9719_1  40 EILHIDDQKLLSyKGNYDTFKEL 62 
                 45555555555332222222222 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 3.2e-05
   PF13401.1   7 lvvtGesGvGKTtllrrlarqldeeaeaae.......karvv...fve.apastspkellqkllsalglpakg.........rltteellealqealrrrrt.........rlliiDEaqr.Lseealeelrsllddetgvklvlv 122
                 ++v+G+ G+GK+t+++ l  +l+  + + e       +  v+   fv+ +p + sp   l++l++ l+++  +          + +e +++ l    ++r +          ll +DE  + L  e ++ l+   +  +  ++v+v
  MMETSP1325-20131115|9719_1 183 ICVVGNNGSGKSTFIKLLTGELQ--PTTGEikrnprlRVGVYdqhFVDrLPMDESPVVYLRRLFNDLDYQSCRnklgkfgleGHAHEICMRDLSGGQKARVVfcelsllqpHLLFLDEPTNnLDIESIDALSEAIN-AYEGGMVVV 325
                 689****************9985..333336788888444446657762555559999999999999999999888877776333333333333333333335555556666888888888787777777777777.666666555 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2       0.7   4.2e+02      55      77 ..      32      46 ..       3     132 .. 0.55
   2 !   17.0   1.1   1.2e-05    0.0069       1      23 [.     182     204 ..     182     398 .. 0.72

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.7
                B-HHHHHHHH....H..HHHHHH CS
   PF13207.1 55 dllaaildglaakkdtlswvidg 77
                d+l+++ +++        + id+
  MMETSP1325-20131115|9719_1 32 DFLNSVCQEI--------LHIDD 46
                3333333333........22222 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 1.2e-05
                 EE--B--TT---HHHHHHHHHHS CS
   PF13207.1   1 viaitGppGsGKsTlakeLaerl 23 
                 +i+++G  GsGKsT+ k+L  +l
  MMETSP1325-20131115|9719_1 182 RICVVGNNGSGKSTFIKLLTGEL 204
                 7******************7776 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   5.2      0.36   2.1e+02      97     158 ..      58     119 ..      31     148 .. 0.68
   2 !   15.4   0.0   7.2e-06    0.0043       9      73 ..     174     229 ..     165     242 .. 0.79
   3 ?   -2.8   0.2       2.4   1.4e+03     118     137 ..     372     391 ..     349     399 .. 0.41

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.36
   PF13166.1  97 eieelkkelkkleekleelekelekkekekekakaklkekawkklakkkeselkealkglkk 158
                  ++el+k+ +++++k  e+++++ +++k++ + k+k+ e++++k+++++    k++ +++++
  MMETSP1325-20131115|9719_1  58 TFKELEKQKRDQQQKAWEQQQKAIRAKKASGVTKKKAMEEVRTKKVREQGGSKKKKADAVAS 119
                 46777777777777777777777777777777777777777776666654444444444333 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 7.2e-06
   PF13166.1   9 geelddfkkvNlIYGrNGsGKtTlSrllrslelkeisekysecsfeiksdselkvrVfNsdfvee 73 
                 + ++d  ++++++ G NGsGK+T+ +ll+  e        + ++ eik++ +l+v V+++ fv++
  MMETSP1325-20131115|9719_1 174 DCGIDMDSRICVV-GNNGSGKSTFIKLLTG-E-------LQPTTGEIKRNPRLRVGVYDQHFVDR 229
                 5566667788877.**************99.4.......344445677899************97 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 2.4
   PF13166.1 118 elekkekekekakaklkeka 137
                 e  + ++++e + ak++e+a
  MMETSP1325-20131115|9719_1 372 EQARIQANLERKAAKRAEEA 391
                 11111112222222222222 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1         3   1.8e+03      26      59 ..      16      48 ..       8      65 .. 0.69
   2 !   13.0   0.0   0.00013     0.076       1      32 [.     183     214 ..     183     239 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 3
  PF00910.17 26 lklkkkdsvysrnpeddfwdgYtgqevvvidDfg 59
                + +k+k+++ + + ++df+++   qe++ idD +
  MMETSP1325-20131115|9719_1 16 YLQKWKKTLLIVSHDQDFLNSVC-QEILHIDDQK 48
                55677777777888888888765.8888888855 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 0.00013
  PF00910.17   1 iwlyGpsgeGKStlakeLakallkklklkkkd 32 
                 i+++G++g GKSt++k L+ +l+ + +++k++
  MMETSP1325-20131115|9719_1 183 ICVVGNNGSGKSTFIKLLTGELQPTTGEIKRN 214
                 799****************9999766555544 PP

>> PF00350.18  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.3      0.64   3.8e+02      50      59 ..      73      83 ..      22     157 .. 0.57
   2 ?   13.9   0.0   5.4e-05     0.032       1      22 [.     183     204 ..     183     214 .. 0.87

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.64
                -----E-EE.T CS
  PF00350.18 50 avkeevkee.e 59
                a+++++k    
  MMETSP1325-20131115|9719_1 73 AWEQQQKAIrA 83
                12222222221 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 5.4e-05
                 EEEE--TT---HHHHHHH---- CS
  PF00350.18   1 iavvGsqSaGKSSllnaLlged 22 
                 i+vvG+  +GKS++++ L ge 
  MMETSP1325-20131115|9719_1 183 ICVVGNNGSGKSTFIKLLTGEL 204
                 89****************9985 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       5.4   3.2e+03      41      63 ..      68      81 ..      49      95 .. 0.54
   2 ?   12.2   0.0   0.00019      0.11       3      32 ..     184     216 ..     183     255 .. 0.78
   3 ?    0.4   0.1      0.79   4.7e+02      42      67 ..     367     392 ..     314     399 .. 0.55

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 5.4
   PF13671.1 41 dqqsktdytrvlkrlyqilnkla 63
                d          +++++++++k +
  MMETSP1325-20131115|9719_1 68 D---------QQQKAWEQQQKAI 81
                1.........1222333333333 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 0.00019
   PF13671.1   3 llvGlpGsGKstlaerllkklg...yvrlsqdt 32 
                  +vG  GsGKst+++ l  +l+   +++ + + 
  MMETSP1325-20131115|9719_1 184 CVVGNNGSGKSTFIKLLTGELQpttGEIKRNPR 216
                 589************997777644455555555 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.79
   PF13671.1  42 qqsktdytrvlkrlyqilnklarkal 67 
                  q +++++r + +l +  +k+a++a+
  MMETSP1325-20131115|9719_1 367 VQMEAEQARIQANLERKAAKRAEEAA 392
                 22223333333333333333333333 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.6    0.0077       4.6     119     199 ..      13      94 ..       7     134 .. 0.80
   2 ?    6.1   0.0     0.011       6.5       5      23 ..     182     200 ..     179     206 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0077
   PF13479.1 119 lt.kllsalgknvvftAhederkdedggaytrfelklgkkvanelpgivDvvgrlevetdddetkk.....Rviilepssavdaknr 199
                 l+ +l++ ++k+ ++++h +   +       + +l+++++   +++g +D  ++le+++ d+++k      + i  ++ s+v+ k+ 
  MMETSP1325-20131115|9719_1  13 LDdYLQK-WKKTLLIVSHDQDFLN----SVCQEILHIDDQKLLSYKGNYDTFKELEKQKRDQQQKAweqqqKAIRAKKASGVTKKKA 94 
                 4424444.7999999999777666....999*************************9999998875666666666666666666654 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.011
   PF13479.1   5 kvliYGkpGiGKTslaktl 23 
                 ++++ G  G+GK++++k l
  MMETSP1325-20131115|9719_1 182 RICVVGNNGSGKSTFIKLL 200
                 689************9977 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   9.4e-05     0.056       5      34 ..     184     219 ..     182     223 .. 0.87
   2 ?   -2.7   0.0       4.1   2.4e+03     269     288 ..     311     330 ..     286     390 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9.4e-05
   PF12846.2   5 lilGppGsGKSvllkkl......vlqllargprvvi 34 
                 +++G  GsGKS+++k l      + + ++r+pr+++
  MMETSP1325-20131115|9719_1 184 CVVGNNGSGKSTFIKLLtgelqpTTGEIKRNPRLRV 219
                 79***************8888888888888888876 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 4.1
   PF12846.2 269 laregRkfgvgiilatQsls 288
                 l      + +g++++t++ +
  MMETSP1325-20131115|9719_1 311 LSEAINAYEGGMVVVTHDAR 330
                 33333334444445554443 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   4.5         1   6.2e+02     132     171 ..      46      85 ..      10     141 .. 0.42
   2 ?   14.8   0.0     4e-05     0.024      23      48 ..     184     209 ..     170     268 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 1
   PF13476.1 132 ilpliaylgqer...ekekfklkekkkrleelekeleeledek 171
                   +l++y+g+ +   e+ek+k+ +   ++++ e++++ + ++k
  MMETSP1325-20131115|9719_1  46 DQKLLSYKGNYDtfkELEKQKRDQ---QQKAWEQQQKAIRAKK 85 
                 223455555555322222222222...2222222222222211 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 4e-05
   PF13476.1  23 lItGpNGsGKTTildAiclaLygkts 48 
                 +++G+NGsGK+T+++ ++  L   t+
  MMETSP1325-20131115|9719_1 184 CVVGNNGSGKSTFIKLLTGELQPTTG 209
                 789***********988766644444 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   0.00016     0.097      63      89 ..     290     316 ..     263     317 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00016
   PF13558.1  63 sirlvfLDEAFsklDeeniasllellr 89 
                 ++ l+fLDE++++lD e+i++l e+++
  MMETSP1325-20131115|9719_1 290 QPHLLFLDEPTNNLDIESIDALSEAIN 316
                 589*****************9999875 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.7      0.49   2.9e+02     102     165 ..      55     115 ..      17     157 .. 0.59
   2 ?   11.3   0.0   0.00033       0.2      24      47 ..     181     204 ..     170     225 .. 0.84
   3 ?   -3.1   0.0       8.2   4.9e+03     108     108 ..     367     367 ..     303     396 .. 0.58

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.49
  PF01935.12 102 lldlleelkddepaaeaqrsvleealeqakakeekeklssdepveklleelkkekeelrklknq 165
                   d ++el++++ +  +q+++ e+  + ++ +++   ++ +  +e+++ +  +e+ +++k+k +
  MMETSP1325-20131115|9719_1  55 NYDTFKELEKQKRD--QQQKAWEQQQKAIR-AKKASGVTKKKAMEEVRTKKVREQGGSKKKKAD 115
                 44444443333222..33333333333333.355555555555555555544333344444443 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00033
  PF01935.12  24 rHlAilgsTGsGKSntvavLleel 47 
                  +++++g  GsGKS+++++L  el
  MMETSP1325-20131115|9719_1 181 SRICVVGNNGSGKSTFIKLLTGEL 204
                 5799****************9887 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 8.2
  PF01935.12 108 e 108
                 +
  MMETSP1325-20131115|9719_1 367 V 367
                 1 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00021      0.12       2      21 ..     182     201 ..     181     207 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00021
                 EEEEE-------HHHHHHHH CS
   PF03205.9   2 ivavvGpkdsGKTtlieklv 21 
                 ++ vvG+ +sGK+t+i+ l 
  MMETSP1325-20131115|9719_1 182 RICVVGNNGSGKSTFIKLLT 201
                 689*************9875 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00037      0.22       2      24 ..     182     204 ..     181     213 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00037
   PF05729.7   2 tvilqGeaGsGKTtLlqklasaw 24 
                  ++++G +GsGK+t+++ l  ++
  MMETSP1325-20131115|9719_1 182 RICVVGNNGSGKSTFIKLLTGEL 204
                 689************99887665 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.8       1.9   1.2e+03      34      69 ..      45      80 ..      34     103 .. 0.67
   2 ?   -1.0   0.0       3.1   1.8e+03     102     122 ..      96     116 ..      92     128 .. 0.78
   3 ?   10.4   0.0   0.00088      0.53       1      23 [.     183     209 ..     183     260 .. 0.72
   4 ?   -1.1   0.1       3.2   1.9e+03      86      86 ..     350     350 ..     290     396 .. 0.57

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 1.9
   PF13238.1 34 gleeevddkidtkeskeldedkldelldkleenese 69
                ++ + +  k++++ +kel + k+d+ ++++e+++++
  MMETSP1325-20131115|9719_1 45 DDQKLLSYKGNYDTFKELEKQKRDQQQKAWEQQQKA 80
                444455555677788888888888888888887773 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 3.1
   PF13238.1 102 peelarRlekRgrkeekiaen 122
                 +e++ + ++++g +++k+a+ 
  MMETSP1325-20131115|9719_1  96 EEVRTKKVREQGGSKKKKADA 116
                 69999*********9999843 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 0.00088
   PF13238.1   1 IlitGtpGvGKtTlakeLaerl....g 23 
                 I+++G  G+GK+T  k+L  +l    g
  MMETSP1325-20131115|9719_1 183 ICVVGNNGSGKSTFIKLLTGELqpttG 209
                 99****************877755552 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 3.2
   PF13238.1  86 e 86 
                  
  MMETSP1325-20131115|9719_1 350 W 350
                 1 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.5       2.4   1.4e+03      75     104 ..      59      91 ..       9     157 .. 0.56
   2 ?   10.3   0.1     0.001      0.62      25      56 ..     182     208 ..     170     341 .. 0.70

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 2.4
   PF13191.1  75 lrellrqlltelaaelggwreallaalga...l 104
                 ++el +q  ++++++ ++ + a++a++++   +
  MMETSP1325-20131115|9719_1  59 FKELEKQKRDQQQKAWEQQQKAIRAKKASgvtK 91 
                 555555555555555555555555555554441 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.001
   PF13191.1  25 lllvtGpsGiGKSsLlrelakpillerlrfaa 56 
                  ++v+G+ G+GKS+ ++      l  +l+ ++
  MMETSP1325-20131115|9719_1 182 RICVVGNNGSGKSTFIKL-----LTGELQPTT 208
                 589***********9987.....444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1713  (0.125293); expected 273.4 (0.02)
Passed bias filter:                      640  (0.046811); expected 273.4 (0.02)
Passed Vit filter:                       109  (0.0079725); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 1.07u 0.36s 00:00:01.43 Elapsed: 00:00:00.56
# Mc/sec: 1720.24
//
Query:       MMETSP1325-20131115|9722_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00063   18.5   0.1     0.0007   18.3   0.1    1.0  1  PF07748.8 Glycosyl hydrolases family 38 C-terminal domain
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.15   11.8   0.0    1.3  1  PF09010.5 Anti-Sigma Factor A


Domain annotation for each model (and alignments):
>> PF07748.8  Glycosyl hydrolases family 38 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.1     1e-07    0.0007     390     456 ..       2      96 ..       1      98 [. 0.86

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 1e-07
                 EEEE----..........B---.---------GGGSS..SEEEEEEE-...............................---........----TT-EEE CS
   PF07748.8 390 vLrryehdgergearlrslskpvsavevnlknllerl..sveeieets...............................lkekvedeevevtLkPmEirT 456
                 +L r+eh  +  e+++ s  k    ++vn++ ll++   + ++ +e +                               +++  ed+e  +tL PmEirT
  MMETSP1325-20131115|9722_1   2 ILIRLEHVFGIDEDAVLS--KS---ATVNVTALLNEIgfETQGATELTltanqakksqhylpwstadqkelskelnekeAAKMLEDNEGVITLDPMEIRT 96 
                 899999999999999555..55...778889898874346666666669******************************9999****************9 PP

>> PF09010.5  Anti-Sigma Factor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.2e-05      0.15      31      77 ..      24      74 ..       2      85 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.2e-05
                HHHHHHHHH---B-.---B--..HHHHHHHHHTS-..HHHHHHHHHHS--- CS
   PF09010.5 31 knfveflnEiGlrtteGkeft..qasFRqlikrLt..qeekkelieeFnqg 77
                 n+ ++lnEiG+ t    e+t   +  ++  + L+  ++++kel +e n+ 
  MMETSP1325-20131115|9722_1 24 VNVTALLNEIGFETQGATELTltANQAKKSQHYLPwsTADQKELSKELNEK 74
                356789*******96666654115666666666663356788888888843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       768  (0.0561732); expected 273.4 (0.02)
Passed bias filter:                      588  (0.0430076); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|9723_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0037   17.1   0.0     0.0051   16.7   0.0    1.2  1  PF03992.11 Antibiotic biosynthesis monooxygenase


Domain annotation for each model (and alignments):
>> PF03992.11  Antibiotic biosynthesis monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   3.7e-07    0.0051       4      54 ..      55     104 ..      52     105 .] 0.86

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 3.7e-07
                 EEEEEEEEGGHHHHHHHHHHHHHHHHHTT-----EEEEEECTTSCEEEEEE CS
  PF03992.11   4 vvnefkvkpgaeeafeeafaeaaesllaeepGflgyellrstddpdevvvi 54 
                 v  +fk+++ +++ f + f+ +ae +  +epG l ye   s++dp +v+++
  MMETSP1325-20131115|9723_1  55 VKLTFKTDEAKQQ-FYADFTPLAEWIKVNEPGTLAYEAINSDKDPLVVLIV 104
                 6678888888886.**********8888*****************977765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|9724_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 343.01
//
Query:       MMETSP1325-20131115|9721_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.31s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 793.46
//
Query:       MMETSP1325-20131115|9725_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 434.34
//
Query:       MMETSP1325-20131115|9726_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|9728_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 278.76
//
Query:       MMETSP1325-20131115|9729_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 244.24
//
Query:       MMETSP1325-20131115|9730_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.062   11.1   0.0      0.073   10.9   0.0    1.0  1  PF06933.6  Special lobe-specific silk protein SSP160
       0.12   11.8   2.2       0.51    9.7   0.2    2.3  2  PF02770.14 Acyl-CoA dehydrogenase, middle domain


Domain annotation for each model (and alignments):
>> PF06933.6  Special lobe-specific silk protein SSP160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.1e-05     0.073     303     352 ..      42      94 ..      32     107 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.1e-05
   PF06933.6 303 tttnsttstnst...sssnsstiagsidiaanltvalqslqalllqeatcapa 352
                 t  n+ t+t ++   s      +a s+d+aa   v  ++lqal lq   ca a
  MMETSP1325-20131115|9730_1  42 TNVNAVTTTAAAelrSMRWCRMMADSMDVAAPQRVHEKALQALALQAPYCAAA 94 
                 44454444443311166678899***************************976 PP

>> PF02770.14  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1     0.032   2.2e+02      35      45 ..      17      27 ..      16      28 .. 0.90
   2 ?    9.7   0.2   7.5e-05      0.51       3      22 ..      34      53 ..      33      59 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.032
  PF02770.14 35 fisnggiadla 45
                +i+ +g +d++
  MMETSP1325-20131115|9730_1 17 WITEAGGCDWV 27
                9********97 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 7.5e-05
  PF02770.14  3 alTEpgaGsDvanlsTtArr 22
                +l E g+G++v +++TtA  
  MMETSP1325-20131115|9730_1 34 GLEEGGGGTNVNAVTTTAAA 53
                577999***********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.72
# Mc/sec: 455.97
//
Query:       MMETSP1325-20131115|9732_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.085   10.9  15.0        0.1   10.6  10.4    1.0  1  PF04615.8 Utp14 protein
        1.1    8.2  13.0        1.3    8.0   9.0    1.1  1  PF04502.8 Family of unknown function (DUF572)
        3.5    7.0   9.5        4.1    6.7   6.6    1.2  1  PF04921.9 XAP5, circadian clock regulator
        7.2    4.6  15.0        8.3    4.4  10.4    1.1  1  PF05262.6 Borrelia P83/100 protein


Domain annotation for each model (and alignments):
>> PF04615.8  Utp14 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6  10.4     3e-05       0.1     336     441 ..      11     127 ..       6     156 .. 0.58

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 3e-05
   PF04615.8 336 deeeededddekdaekenkealrkkleklkeaeddee...qsgllemkf.mqraearkkeendeeeeelreeleeeeesdeeeee.......kkekknegrrkfgpee.sekeaeskk 441
                 ++eee++ d e+++++++  a+++++e+ +e+ed+e+   + +++++++ + r+++++k ++ +e+++l+ee+e+eee + +ee        +++ ++ g+  + pe+ +e++ae  +
  MMETSP1325-20131115|9732_1  11 ENEEEQQADIEEEDKPAEGGAAEQQQEE-EEDEDEEDakgNPSVNSLPAhVSRKSEAEKLQHMNEVKRLQEEYEKEEEVEAAEEAghafflkEEKLEEAGEGAYFPEHpAEQSAEPLS 127
                 2222222222333444444444444444.33333333356666666665145666666999999999999999999999888877888888666666677777777554433333222 PP

>> PF04502.8  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   9.0   0.00038       1.3     112     237 ..      11     135 ..       4     166 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00038
   PF04502.8 112 keaeeqverlekeeeeeeagdamkklEkrtadskremevlerLeeLkelqsrkadvavesmLealrreekkeeeeeeeedeelikslslgleseedrrlakd.....edkedekekkketseksakssssa 237
                 +++eeq+  +e+e +  e g+a ++ E+++ + ++ ++   +++ L +  srk +++  + +++ +r +++ e+eee e +e+  ++ + l++e+ ++   +     e +  e   ++ ++ ++a+s+ss 
  MMETSP1325-20131115|9732_1  11 ENEEEQQADIEEEDKPAEGGAAEQQQEEEEDEDEEDAKGNPSVNSLPAHVSRKSEAEKLQHMNEVKRLQEEYEKEEEVEAAEEAGHA-FFLKEEKLEEA-GEgayfpE-HPAE---QSAEPLSRASSKSSG 135
                 566777777888888889999999999999999999999999999999999988888877777777777777777777766666666.54555555554.33355542.2222...122222222222222 PP

>> PF04921.9  XAP5, circadian clock regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.6    0.0012       4.1      16      95 ..      10      89 ..       2     139 .. 0.52

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0012
   PF04921.9 16 deeeeeeeeeeeekeeeekeeeeteeenknkkdkkkkkkkkigknpsvdtsflpdkereekee....ekreelrkeflkkqeav 95
                 e+eee+ +++ e+e ++ e  + e+++++++d+   +++    npsv+   +    + e+e+    ++ ++l++e+ k++e  
  MMETSP1325-20131115|9732_1 10 AENEEEQ-QADIEEEDKPAEGGAAEQQQEEEEDE---DEEDAKGNPSVNSLPAHVSRKSEAEKlqhmNEVKRLQEEYEKEEEVE 89
                3333222.22222222222222222222222222...23444556666554332222222222000123345555555555443 PP

>> PF05262.6  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  10.4    0.0024       8.3     220     315 ..      13     107 ..       6     144 .. 0.56

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0024
   PF05262.6 220 eeldkkqkdadkakkkadtaednadkqrkevreklqeakn.lpepadvsskkedkkvaeekkreiekaqkeikkkdeeakkakdak.aedlkkeskae 315
                 ee +++ ++ +++  +   ae++ + + +e +e  + +      pa+vs k e +k++  + +e+ + q+e +k++e  + a++a  a+ lk+e  +e
  MMETSP1325-20131115|9732_1  13 EEEQQADIEEEDKPAEGGAAEQQQEEEEDEDEEDAKGNPSvNSLPAHVSRKSEAEKLQ--HMNEVKRLQEEYEKEEEV-EAAEEAGhAFFLKEEKLEE 107
                 3333333333333334444444444444444444444333033478888888888888..777888877777776553.3333332277777774443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1222  (0.0893798); expected 273.4 (0.02)
Passed bias filter:                      620  (0.0453482); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.39s 00:00:01.19 Elapsed: 00:00:00.59
# Mc/sec: 751.40
//
Query:       MMETSP1325-20131115|9733_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 683.96
//
Query:       MMETSP1325-20131115|9731_1  [L=360]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 1725.38
//
Query:       MMETSP1325-20131115|9737_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|9738_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0055   16.8   0.0      0.008   16.3   0.0    1.3  1  PF03171.15 2OG-Fe(II) oxygenase superfamily
  ------ inclusion threshold ------
      0.022   14.3   0.0      0.034   13.6   0.0    1.3  1  PF02668.11 Taurine catabolism dioxygenase TauD, TfdA family
      0.062   12.7   0.0      0.083   12.3   0.0    1.2  1  PF13036.1  Protein of unknown function (DUF3897)
      0.077   12.5   0.0       0.11   12.0   0.0    1.2  1  PF01638.12 HxlR-like helix-turn-helix


Domain annotation for each model (and alignments):
>> PF03171.15  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.3e-06     0.008      10      97 ..      13      93 ..       4      95 .. 0.67

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 2.3e-06
                EES--E-EEEEEEEESS..SCEEEEEEE....T--EEEEEE-EESCECECTSTTEEEEEEEEHHCCCE---GTT-EEEE----CSEEEEEEEEE CS
  PF03171.15 10 YpppekglglgpHtDne..nriltillq....ddggglqfrkedkwidvppdpvallvnfgdvllvltngryksvlHrvlpntrgeRislaffl 97
                +p   +   l  H D +  ++ + ++l     + ggg  +        +p    ++ + +gd ++      +  v+H++ p t+geR+sl++f+
  MMETSP1325-20131115|9738_1 13 FP---NENALLRHIDGAhvDGSVILALPtdspFTGGGVTVW-----EGTPEVTYKYPMAPGD-MC----MLDNYVWHQGNPITAGERWSLVIFY 93
                44...555555566655433333333335787555555554.....457777779*******.55....45668******************98 PP

>> PF02668.11  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     1e-05     0.034     217     255 ..      54      89 ..      46      92 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1e-05
                 TTT-EEE------EEEE-TTT-BB----------S-EEE CS
  PF02668.11 217 peftyrhkwqeGdlvifdNrrvlHgrtafddetgeRhll 255
                 pe ty++ + +Gd+++ dN+ v+H   +    +geR+ l
  MMETSP1325-20131115|9738_1  54 PEVTYKYPMAPGDMCMLDNY-VWHQGNPI--TAGERWSL 89 
                 899****************7.89999999..99999965 PP

>> PF13036.1  Protein of unknown function (DUF3897)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.4e-05     0.083      59      99 ..      83     124 ..      69     149 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.4e-05
   PF13036.1  59 dgvr.pvllvdsvkNkTsehidtesltkkirraLlksgkftf 99 
                  g+r ++++ + v NkT ++ +t+ l ++++ra l  +k + 
  MMETSP1325-20131115|9738_1  83 AGERwSLVIFYAVSNKTAQTSNTQRLLQTMKRAALDRQKEQQ 124
                 4566799***********************998766655544 PP

>> PF01638.12  HxlR-like helix-turn-helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.2e-05      0.11       3      39 ..      84     120 ..      82     136 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.2e-05
  PF01638.12   3 ggkWkllilvellkgkkRfselkralpgisqkvLter 39 
                 g++W+l+i++++ +++  +s+ +r l ++ +  L ++
  MMETSP1325-20131115|9738_1  84 GERWSLVIFYAVSNKTAQTSNTQRLLQTMKRAALDRQ 120
                 89************************99999998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       672  (0.0491516); expected 273.4 (0.02)
Passed bias filter:                      515  (0.0376682); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 738.08
//
Query:       MMETSP1325-20131115|9740_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00032   20.5   0.0    0.00065   19.5   0.0    1.5  1  PF00106.20 short chain dehydrogenase


Domain annotation for each model (and alignments):
>> PF00106.20  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   4.7e-08   0.00065     104     166 ..       5      74 ..       2      75 .. 0.91

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 4.7e-08
                 HHHHHHHHTHHHHHHHHHHHH....HH...---EEEEEECHHHHSSTT.HHHHHHHCHHHCCHHHHHHHH CS
  PF00106.20 104 lervlapkvtgawllheltld....ad...lgafvlfSSvagvlgspgqaaYaaakaaldalaesrraeg 166
                 +e+v+++++ g++l+++++++    ++   +  f ++ S+    g pg  +Y+a+k +l +++ s+ ae+
  MMETSP1325-20131115|9740_1   5 IEAVVKVNLLGSLLCTQAAMKlmgeQSgtiGHIFNTVGSGVKGGGTPGYVVYGATKRGLPQMTDSLVAEL 74 
                 799******************988733677999*******************************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 1055.42
//
Query:       MMETSP1325-20131115|9741_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 366.79
//
Query:       MMETSP1325-20131115|9744_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.6e-19   68.0   0.2    7.2e-19   67.8   0.1    1.0  1  PF07258.9 HCaRG protein


Domain annotation for each model (and alignments):
>> PF07258.9  HCaRG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   0.1   5.2e-23   7.2e-19      32     175 ..       5     146 ..       1     149 [. 0.96

  Alignments for each domain:
  == domain 1    score: 67.8 bits;  conditional E-value: 5.2e-23
   PF07258.9  32 veklaadakieeeelkalvaalstllksaakhdvdeeqlsaeLeqlklpkehaealskvykenkkklreslaktslrlphLedlsWRvdvklssselqevnsPvilleLklqngggssetvtfelseeklqellkelkeaqkel 175
                 v +laa+ +  +++++ +v +l++ + + ak+++ +e + +   q     e  ++l+++y ++k+++++s ++  + lp+++ l+WR+dv+l+++++ + ++ +  ++L++ ng  +++ v+++ + +++++l kel++a +e 
  MMETSP1325-20131115|9744_1   5 VGELAAQMNSRPDQIRPVVHGLASAFWECAKARLADELFLQAMTQVSTRPEINQLLLECYLAKKEDIMQSTSAFGMALPEYQHLDWRIDVELGRRSVYQDANFTFMMRLDVDNG--EESSVQLQADYANMKNLQKELESAVAEA 146
                 67889999999*******************************************************************************************************..***********************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       675  (0.049371); expected 273.4 (0.02)
Passed bias filter:                      505  (0.0369368); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.42s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 692.77
//
Query:       MMETSP1325-20131115|9746_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0036   16.8   2.4     0.0055   16.2   1.7    1.3  1  PF00628.24 PHD-finger
  ------ inclusion threshold ------
       0.02   13.8   0.1      0.027   13.4   0.0    1.1  1  PF02276.13 Photosynthetic reaction centre cytochrome C subunit
      0.053   12.7   0.9       0.11   11.7   0.0    1.8  2  PF13831.1  PHD-finger


Domain annotation for each model (and alignments):
>> PF00628.24  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.7   1.2e-06    0.0055       2      35 ..     140     174 ..     139     178 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.2e-06
                 BTTTTCTCTTS-EE.EBSSSSSEEETTTSSS-SSH CS
  PF00628.24   2 CkiCgesdeegelv.lCdgCkewfHlkClglkles 35 
                 C  C+  + + +++  C gC+ +fH+kC g kl++
  MMETSP1325-20131115|9746_1 140 CVTCHMPEIGRDMLtECPGCRVHFHPKCEGWKLNE 174
                 99****8887777736************9998774 PP

>> PF02276.13  Photosynthetic reaction centre cytochrome C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0     6e-06     0.027     251     302 ..     103     149 ..      95     160 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6e-06
                 HH---HHHHH.HHHHTTGGGGGTS-GGG--------B--HHHHH----STT-- CS
  PF02276.13 251 awlgirmvre.lnneylepledvlPeerlGpvgdaakvnCaTCHqgaqkPlqG 302
                 + + irmv   l + y ++l  + P+ rlG+ + +a ++C TCH+ +     G
  MMETSP1325-20131115|9746_1 103 SQHEIRMVGAtLAEVYASKL--AAPHLRLGAGSAVALAQCVTCHMPE----IG 149
                 56889999651566666666..88*******99***********843....45 PP

>> PF13831.1  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.29   1.3e+03       6      11 ..     139     144 ..     136     145 .. 0.70
   2 ?   11.7   0.0   2.4e-05      0.11       4      24 ..     153     173 ..     150     178 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.29
   PF13831.1   6 vCskCs 11 
                 +C+ C 
  MMETSP1325-20131115|9746_1 139 QCVTCH 144
                 688886 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 2.4e-05
   PF13831.1   4 llvCskCsvaVHasCYGvsee 24 
                 l  C +C+v++H +C G + +
  MMETSP1325-20131115|9746_1 153 LTECPGCRVHFHPKCEGWKLN 173
                 678************887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 989.80
//
Query:       MMETSP1325-20131115|9743_1  [L=474]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.045   13.5   0.0      0.095   12.5   0.0    1.6  1  PF00439.20 Bromodomain


Domain annotation for each model (and alignments):
>> PF00439.20  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     7e-06     0.095      33      70 ..      46      83 ..      16      95 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7e-06
  PF00439.20 33 ikrPidLktIqkklasgkyqslaqfekdlelvfsNavk 70
                 +  +dL+tI+  l sg+y+s +++  dle v+s a++
  MMETSP1325-20131115|9743_1 46 ATDDLDLNTIEVLLMSGEYTSHQALVGDLESVWSVAIR 83
                57789****************************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.34s 00:00:01.11 Elapsed: 00:00:00.47
# Mc/sec: 2416.75
//
Query:       MMETSP1325-20131115|9742_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.077   11.6   0.2       0.12   10.9   0.1    1.2  1  PF08926.6 Domain of unknown function (DUF1908)
      0.091   12.6   0.2       0.16   11.8   0.2    1.3  1  PF08406.5 CbbQ/NirQ/NorQ C-terminal
       0.29   11.9   2.8       0.24   12.2   0.8    1.6  2  PF08591.5 Ribonucleotide reductase inhibitor
        7.3    4.2  12.5        9.3    3.8   8.7    1.0  1  PF05642.6 Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> PF08926.6  Domain of unknown function (DUF1908)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   3.6e-05      0.12      42      79 ..     129     167 ..     122     172 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.6e-05
   PF08926.6  42 sGygttpgssnv.ssssssqerlhqlpfqptdddlklls 79 
                 +  g++++ss+  ss ss  e lh++ f   d++++ll+
  MMETSP1325-20131115|9742_1 129 ATAGSATSSSSSsSSWSSELEELHNMGFLDDDKNVELLV 167
                 444444444444055566679********9999999886 PP

>> PF08406.5  CbbQ/NirQ/NorQ C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   4.7e-05      0.16      46      80 ..      71     104 ..      66     106 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.7e-05
   PF08406.5  46 aakLiaaglslreAveaalvepLtddaevrealee 80 
                  +kL+a+g +++eA+ +a+ + Lt++a+v++a+++
  MMETSP1325-20131115|9742_1  71 FGKLVAEGHAPNEAAALAI-QQLTQEAKVAQAMQQ 104
                 69************88886.78**********986 PP

>> PF08591.5  Ribonucleotide reductase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.4   4.7e+03      73      77 ..      42      46 ..      25      70 .. 0.49
   2 ?   12.2   0.8   6.9e-05      0.24       6      93 ..      67     151 ..      63     154 .. 0.62

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.4
   PF08591.5 73 qssts 77
                 ++t 
  MMETSP1325-20131115|9742_1 42 STTTP 46
                22222 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 6.9e-05
   PF08591.5   6 VGMRvRksVaeGYktgkkasgfknesststsda.teaagksaktaaasanrelapfcglsksggmlvqqsstsgsgdalslwessqesn 93 
                 V+ R  k VaeG+   ++a+++  ++ t+ +++ ++ +++   ++++      ap ++   + + ++  s ts+s ++ s w+s+ e++
  MMETSP1325-20131115|9742_1  67 VAQRFGKLVAEGHAP-NEAAALAIQQLTQEAKVaQAMQQQPPVSSPI--APVSAPAPAPAPAAPAATAGSATSSS-SSSSSWSSELEEL 151
                 66677789*******.6665653333333333212222222222222..34445555556677999989999999.99999**999875 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   8.7    0.0027       9.3     196     299 ..       4     144 ..       2     155 .. 0.69

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.0027
   PF05642.6 196 GvGvpGvggvgvlpgvgvprvgvapgvGvgglggv.....................pgvgv....................lesnssseGeedddeeeeeenksiepgvGvpGvrvgaatssssttspssstttttpassgpsaq 299
                 G G  G+gg+g + g+    v  +p+  ++  gg                      p                        +e+ ++   ++  +e++  ++   +p v  p   v a + ++++++p++++ ++t++ss+ s+ 
  MMETSP1325-20131115|9742_1   4 GGGGCGGGGMGDAAGISAMDVDASPNNNISSDGGAavsstttpptappattpvpppP---AitqaavaqrfgklvaeghapNEA-AALAIQQLTQEAKVAQAMQQQPPVSSPIAPVSAPAPAPAPAAPAATAGSATSSSSSSSSW 144
                 55667889**********************999986677777766666666666551...045555555666665555442332.333345555666666777777999999999999999999998887777666666665543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       640  (0.046811); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 938.15
//
Query:       MMETSP1325-20131115|9747_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-11   43.1   3.4    3.4e-11   42.4   2.3    1.3  1  PF02213.11 GYF domain
  ------ inclusion threshold ------
      0.035   13.5   0.0      0.064   12.7   0.0    1.4  1  PF14237.1  Domain of unknown function (DUF4339)


Domain annotation for each model (and alignments):
>> PF02213.11  GYF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   2.3   4.9e-15   3.4e-11       3      44 ..      76     117 ..      74     126 .. 0.89

  Alignments for each domain:
  == domain 1    score: 42.4 bits;  conditional E-value: 4.9e-15
                 EEEE-----EE-EE-HHHHHHHHTTTSS-S--EEEE----TT CS
  PF02213.11   3 WeYkdpqgkiqGPFsseeMqsWykegYFqpslqvrrvedsqe 44 
                 W+Ykd++g+ qGP+ s+ M+sW++eg+F    +v + e s +
  MMETSP1325-20131115|9747_1  76 WYYKDDNGEAQGPYKSSWMRSWHQEGHFDREIEVCFGEPSLW 117
                 *********************************999877666 PP

>> PF14237.1  Domain of unknown function (DUF4339)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   9.3e-06     0.064       2      30 ..      76     105 ..      75     110 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 9.3e-06
   PF14237.1   2 wyyar.ngqqaGPfsleeLrqliasgqitp 30 
                 wyy + ng+ +GP+  + +r++ ++g+ ++
  MMETSP1325-20131115|9747_1  76 WYYKDdNGEAQGPYKSSWMRSWHQEGHFDR 105
                 899888***************999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 778.82
//
Query:       MMETSP1325-20131115|9748_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 413.92
//
Query:       MMETSP1325-20131115|9749_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 404.39
//
Query:       MMETSP1325-20131115|9750_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   14.2   0.0      0.042   14.0   0.0    1.3  1  PF10956.3 Protein of unknown function (DUF2756)


Domain annotation for each model (and alignments):
>> PF10956.3  Protein of unknown function (DUF2756)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     3e-06     0.042      20      58 ..      15      53 ..       5      91 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 3e-06
   PF10956.3 20 invlnnpnqpGyvipsqqrlqtqmqtqqlqqkgmlkqql 58
                + +  npn p   ip+ q +q++      q ++ml   +
  MMETSP1325-20131115|9750_1 15 VCIEMNPNAPDSEIPADQLVQAKSYLDHEQARAMLFGGI 53
                55778*****************************97665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 548.50
//
Query:       MMETSP1325-20131115|9752_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   12.9   0.4       0.15   11.9   0.3    1.5  1  PF08590.5 Domain of unknown function (DUF1771)


Domain annotation for each model (and alignments):
>> PF08590.5  Domain of unknown function (DUF1771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   1.1e-05      0.15       8      35 ..     143     170 ..     138     172 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF08590.5   8 eAdehgkkraelfqkAaeAyrrGdkaaA 35 
                 + ++++  r++ +qkA+  y++G +++A
  MMETSP1325-20131115|9752_1 143 QVRQAYVTRKRTSQKAQTSYKSGGSEEA 170
                 6789999******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       512  (0.0374488); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1066.13
//
Query:       MMETSP1325-20131115|9754_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 218.98
//
Query:       MMETSP1325-20131115|9755_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       125  (0.00914277); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 192.56
//
Query:       MMETSP1325-20131115|9757_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 404.90
//
Query:       MMETSP1325-20131115|9758_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|9756_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   14.6   0.3      0.037   13.9   0.2    1.3  1  PF14181.1  YqfQ-like protein
        5.9    7.2  10.5        5.9    7.2   1.9    3.0  3  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF14181.1  YqfQ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   5.4e-06     0.037       2      65 ..     102     163 ..      79     170 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 5.4e-06
   PF14181.1   2 GlLsklfkkggpyrqaegqaaesnelrgaastgagassgigsfisnlaspanltsmLnNvqkvl 65 
                 Gl + +   + ++ +a  +++  ++ +gaa+++a++++g+g+ ++  + p+ +++mL Nv + l
  MMETSP1325-20131115|9756_1 102 GLVASMVAAAREKLTAGVETMLREKAEGAAAAAAAGGTGGGNELE--VTPQDVQGMLANVGQEL 163
                 555555555555555555668888999999999999999999999..7788********97755 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.6      0.05   3.4e+02      71      84 ..      51      62 ..      46      65 .. 0.48
   2 ?    7.2   1.9   0.00086       5.9      36      59 ..     105     139 ..      93     145 .. 0.63
   3 ?    1.5   0.0     0.051   3.5e+02       1      22 [.     146     167 ..     146     176 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.05
  PF00428.14 71 keeeeeEeedddmG 84
                 eee  Ee +   G
  MMETSP1325-20131115|9756_1 51 NEEE--EEAEGQVG 62
                2222..24555555 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.00086
  PF00428.14  36 keliangsakla...........aaaaaaaaaaaa 59 
                  +++a++++kl+           + aaaaaaa+++
  MMETSP1325-20131115|9756_1 105 ASMVAAAREKLTagvetmlrekaEGAAAAAAAGGT 139
                 55667777777777777778864333444444333 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.051
  PF00428.14   1 eptaadikavlkaagveveaer 22 
                 e+t +d++ +l+++g e+++++
  MMETSP1325-20131115|9756_1 146 EVTPQDVQGMLANVGQELNEIK 167
                 58999***********999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 880.29
//
Query:       MMETSP1325-20131115|9753_1  [L=858]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-54  183.2   0.0    5.8e-54  182.4   0.0    1.4  1  PF02436.13 Conserved carboxylase domain
    2.3e-18   66.6   0.3    4.5e-18   65.6   0.2    1.4  1  PF00682.14 HMGL-like
    2.9e-16   58.7   6.5    6.5e-16   57.6   4.5    1.6  1  PF00364.17 Biotin-requiring enzyme
    9.4e-12   44.2   0.2    2.1e-07   30.4   0.0    2.6  2  PF13533.1  Biotin-lipoyl like
    2.7e-06   26.8   0.3     0.0057   15.8   0.0    2.3  2  PF00529.15 HlyD family secretion protein
    0.00023   20.2   0.4       0.44    9.5   0.0    2.2  2  PF12700.2  HlyD family secretion protein
    0.00027   20.4   0.8    0.00062   19.3   0.5    1.6  1  PF13375.1  RnfC Barrel sandwich hybrid domain
  ------ inclusion threshold ------
       0.01   15.4   1.3       0.03   13.9   0.6    2.0  2  PF09891.4  Uncharacterized protein conserved in archaea (DUF2118)
       0.12   12.5   0.2       0.47   10.7   0.1    2.0  2  PF13437.1  HlyD family secretion protein


Domain annotation for each model (and alignments):
>> PF02436.13  Conserved carboxylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.4   0.0   3.8e-57   5.8e-54       1     191 [.     505     699 ..     505     704 .. 0.93

  Alignments for each domain:
  == domain 1    score: 182.4 bits;  conditional E-value: 3.8e-57
  PF02436.13   1 vykheiPGGqlsNLesQlkelgledrleevleeiarvrkdlGdipkVTPsSkiVGdlAvlnVlnnlteedvlge.aryksipkevvdllkGelGqppggfpeelqkkvlkg..eepitcrpadllepleleklrkeleekageklseedvlsyalypkvaekfleereeyg.dvsvlpteeffkglevgeeieve 191
                 v+ heiPGGq+ NL  Q+k++gl+dr+eev++++ +v+ ++Gd++kVTPsSk+VGdlA++++  nl+++d+l+  + ++++p++vvdl++G lG p+ gfp++lq+k+l++  + ++t+rp+ +l+ ++l++ +++le+k g ++++e ++s+++ypkv+ ++l+  ++ + +++ lpt+ f++gl+ g++ ++e
  MMETSP1325-20131115|9753_1 505 VFDHEIPGGQYANLLVQCKSMGLGDRWEEVCDMYHDVNMLMGDVVKVTPSSKVVGDLALYLINLNLKASDILDPvKGDIDFPASVVDLMRGGLGFPHLGFPPALQQKILDKagAVALTERPGLTLPAADLAAQKANLESKWGMEFDDERTISSLIYPKVFDDYLKFTKAHSmALTYLPTTVFYYGLSLGQTATIE 699
                 899********************************************************************87625689******************************76225556************************************************9877652788999***********999887 PP

>> PF00682.14  HMGL-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.2     3e-21   4.5e-18       1     233 [.     221     463 ..     221     466 .. 0.83

  Alignments for each domain:
  == domain 1    score: 65.6 bits;  conditional E-value: 3e-21
                 ----TTSSS-.--HHHHH...HHHHHHHH----EE--E.........B-S-TTTSTT---HHHHH--------B-.............-EE-SS----HHHHH----EEE------HHHHHHHHSSTHHHHHHHHHHHHHHHHHTT-EE......-----------HHHHHHHHHHHHH-----EEE-----------HHHHHHHHHHHS-GGGEEEE-------HHHHHHHHHH----EEEEB-----------BHHHHHHHH CS
  PF00682.14   1 RDGeqalkaa.lsveekl...aiakaLdeagvdeiEvg........ipfaseedfesvraiaevlkkakiqallr.............vvekdieraveaakaagadrvhvfiatselllkkklkkdreevleraeeaveaarsagadv......elgcedasrtdlefllevveaaaeagatriniaDtvGvltPnevaelisalkkrvpevelevHcHndlGmAvanslaAveaGadrvdgtvaGlGeraGnaaleelvaal 233
                 RD++q+l a+ +++ + +   aia +L    + ++E++        ++f+ e+++e++ ai ++ ++   q+l+r             vve+++  a++     ++d++++f+  +               +++++ ++ a+r+a++ +      +  +++++  ++e+  ++v ++++aga +i i+D+ G+l+P+++a l++ +++ ++ +++++H+H + +  +a ++   +aG+d vd + a++   +  ++l+++ a +
  MMETSP1325-20131115|9753_1 221 RDAHQSLLATrVRTIDLVkgaAIASKLLPNAF-SVECWggatfdvcYRFLHEDPWERLAAIRAACPNICTQMLIRganavgytsypdnVVEEFVALAAK-----NMDVFRIFDCFNA--------------PDQMKVCIDAVRKANKVAevcicyTGDINTSTIYNVEYYRDLVGKIVDAGAHIIGIKDMAGLLKPQAAAPLMAVIREITD-LPVHFHTHCTSSASLATAIEMTRAGCDIVDFATASMADLSSQPSLNAFCASM 463
                 78888777666555444411156666655544.6799999999999*************************************9777766777666666.....*************..............99999999999999988844343333344555556666677889999****************************99999.*************************************999999999998877 PP

>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   4.5   4.3e-19   6.5e-16       2      74 .]     773     839 ..     772     839 .. 0.97

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 4.3e-19
                 EES-S----EEEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEESS-TT-EE----ECEEE CS
  PF00364.17   2 eiksPmiGesvkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllaki 74 
                 e+ sPm+G + k       lvk+Gd+V +g+vla+v amKme+e++a ++G+v +++v eG +v +g llak+
  MMETSP1325-20131115|9753_1 773 EVASPMPGAVEK------LLVKEGDEVTEGDVLAIVVAMKMEVEVKASMTGTVGSVHVVEGCKVVEGALLAKL 839
                 799*********......****************************************************996 PP

>> PF13533.1  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   1.4e-10   2.1e-07       5      33 ..     774     802 ..     773     808 .. 0.93
   2 !   11.2   0.0   0.00013       0.2       3      34 ..     809     840 ..     803     847 .. 0.93

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 1.4e-10
   PF13533.1   5 IappvsGrVeevlVkeGqeVkkGDvLlel 33 
                 +a+p +G Ve++lVkeG+eV  GDvL+++
  MMETSP1325-20131115|9753_1 774 VASPMPGAVEKLLVKEGDEVTEGDVLAIV 802
                 89************************986 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00013
   PF13533.1   3 vsIappvsGrVeevlVkeGqeVkkGDvLleld 34 
                 v ++++  G+V +v+V+eG  V  G +L+ l+
  MMETSP1325-20131115|9753_1 809 VEVKASMTGTVGSVHVVEGCKVVEGALLAKLE 840
                 8999************************9986 PP

>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   3.8e-06    0.0057       4      31 ..     773     800 ..     773     801 .. 0.95
   2 !    8.5   0.0   0.00063      0.96       3      41 ..     809     847 ..     808     856 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3.8e-06
                 EE--S----EEEE-S----------EEE CS
  PF00529.15   4 evqpqvsGivievlvkeGdrVkaGdvLv 31 
                 ev ++  G v+++lvkeGd V +GdvL+
  MMETSP1325-20131115|9753_1 773 EVASPMPGAVEKLLVKEGDEVTEGDVLA 800
                 689999*********************6 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00063
                 EEE--S----EEEE-S----------EEEEE--HHHHHH CS
  PF00529.15   3 aevqpqvsGivievlvkeGdrVkaGdvLvrlDptpaqaa 41 
                 +ev++  +G+v  v v eG +V +G +L++l++    + 
  MMETSP1325-20131115|9753_1 809 VEVKASMTGTVGSVHVVEGCKVVEGALLAKLEGKMTLTK 847
                 89*****************************98776655 PP

>> PF12700.2  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00029      0.44      24      50 ..     774     801 ..     766     807 .. 0.90
   2 !    9.2   0.1   0.00035      0.54      19      65 ..     806     853 ..     801     856 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00029
   PF12700.2  24 vsaeesGyi.kylvkeGekVkkgqvlat 50 
                 v ++ +G + k+lvkeG+ V +g+vla 
  MMETSP1325-20131115|9753_1 774 VASPMPGAVeKLLVKEGDEVTEGDVLAI 801
                 77899*********************96 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00035
   PF12700.2  19 reeevvsaeesGyi.kylvkeGekVkkgqvlatldsseldeqlkeala 65 
                 + e+ v+a  +G++ ++ v eG kV +g  la+l+ + +  +  e+la
  MMETSP1325-20131115|9753_1 806 KMEVEVKASMTGTVgSVHVVEGCKVVEGALLAKLEGKMTLTKSAENLA 853
                 57999*****************************99988888777666 PP

>> PF13375.1  RnfC Barrel sandwich hybrid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.5   4.1e-07   0.00062      39      81 ..     780     823 ..     772     840 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 4.1e-07
   PF13375.1  39 GapakpvVkvgdkVlkGqliaeaeg.fvsapvhasvSGtVkaie 81 
                 Ga  k++Vk+gd+V++G ++a   +  ++++v as++GtV +++
  MMETSP1325-20131115|9753_1 780 GAVEKLLVKEGDEVTEGDVLAIVVAmKMEVEVKASMTGTVGSVH 823
                 88999****************99886679***********9886 PP

>> PF09891.4  Uncharacterized protein conserved in archaea (DUF2118)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.6     2e-05      0.03      87     132 ..     778     822 ..     770     829 .. 0.85
   2 ?    0.4   0.0      0.29   4.4e+02      89     113 ..     817     841 ..     812     844 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2e-05
   PF09891.4  87 vegykvtlivdvGdrvrkgdalaavttrkgevrylrspveGvVvfi 132
                 + g +  l v++Gd+v +gd+la+v + k ev  +++  +G+V  +
  MMETSP1325-20131115|9753_1 778 MPGAVEKLLVKEGDEVTEGDVLAIVVAMKMEVE-VKASMTGTVGSV 822
                 567777899***********************5.899999999655 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.29
   PF09891.4  89 gykvtlivdvGdrvrkgdalaavtt 113
                 g + +++v +G++v +g  la ++ 
  MMETSP1325-20131115|9753_1 817 GTVGSVHVVEGCKVVEGALLAKLEG 841
                 67778999************99875 PP

>> PF13437.1  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00031      0.47       2      42 ..     774     815 ..     773     831 .. 0.82
   2 ?    1.8   0.0      0.18   2.7e+02       1      30 [.     810     839 ..     810     845 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00031
   PF13437.1   2 lrApvdGvVhevnvqegqvvaagdplaeiipt.delkveayv 42 
                 + +p+ G V ++ v+eg+ v  gd+la ++    e++v+a++
  MMETSP1325-20131115|9753_1 774 VASPMPGAVEKLLVKEGDEVTEGDVLAIVVAMkMEVEVKASM 815
                 779*************************99753467776665 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.18
   PF13437.1   1 tlrApvdGvVhevnvqegqvvaagdplaei 30 
                 +++A+++G+V +v v eg  v  g+ la++
  MMETSP1325-20131115|9753_1 810 EVKASMTGTVGSVHVVEGCKVVEGALLAKL 839
                 589************999888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (858 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.31u 0.38s 00:00:01.69 Elapsed: 00:00:00.78
# Mc/sec: 2635.99
//
Query:       MMETSP1325-20131115|9759_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   15.8   2.8      0.014   15.8   1.2    1.6  2  PF01230.18 HIT domain


Domain annotation for each model (and alignments):
>> PF01230.18  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.8   1.2   9.9e-07     0.014      82      97 ..       1      16 [.       1      17 [. 0.92
   2 ?   -1.0   0.0      0.18   2.4e+03      45      57 ..      30      42 ..      20      47 .] 0.55

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 9.9e-07
  PF01230.18 82 gqsvahlHiHviprre 97
                gq v+h H+H+ipr++
  MMETSP1325-20131115|9759_1  1 GQIVFHTHFHIIPRHD 16
                89***********985 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.18
  PF01230.18 45 eeelakllslvkk 57
                +e+   +++++kk
  MMETSP1325-20131115|9759_1 30 DEDAIPVMEAIKK 42
                4444445555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 225.26
//
Query:       MMETSP1325-20131115|9760_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       736  (0.0538327); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 392.59
//
Query:       MMETSP1325-20131115|9763_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-19   66.8   1.5    4.8e-06   25.3   0.0    4.4  4  PF00036.27 EF hand
    8.1e-19   65.6   1.7      8e-06   25.2   0.0    3.8  4  PF13405.1  EF-hand domain
    6.8e-16   58.0   2.6    1.5e-11   44.1   0.1    2.5  2  PF13499.1  EF-hand domain pair
    6.2e-13   48.0   1.5      7e-09   35.0   0.0    3.6  3  PF13833.1  EF-hand domain pair
    8.4e-11   40.5   0.2    5.6e-05   22.1   0.0    3.5  3  PF13202.1  EF hand
    5.3e-05   22.3   0.9       0.15   10.9   0.0    2.1  2  PF02353.15 Mycolic acid cyclopropane synthetase
  ------ inclusion threshold ------
      0.027   14.4   1.5       0.21   11.5   0.1    2.2  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
      0.069   13.2   0.7       0.24   11.5   0.2    2.1  2  PF05517.7  p25-alpha
      0.089   12.7   0.1       0.19   11.7   0.1    1.5  1  PF09943.4  Uncharacterized protein conserved in archaea (DUF2175)
       0.11   12.2   0.9        7.9    6.2   0.0    2.6  2  PF04536.9  Repair protein


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   3.5e-09   4.8e-06       3      27 ..      52      76 ..      50      78 .. 0.90
   2 !   21.0   0.0   8.5e-08   0.00012       1      25 [.      85     109 ..      85     112 .. 0.93
   3 !   14.9   0.0   7.9e-06     0.011       2      27 ..     121     146 ..     120     148 .. 0.94
   4 ?    1.4   0.0      0.16   2.2e+02      16      28 ..     165     177 ..     162     178 .. 0.88

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 3.5e-09
                HHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkealk 27
                +  F++fD+D++G I+++Ef+e+l+
  MMETSP1325-20131115|9763_1 52 RHEFEKFDTDHSGEITVKEFREVLS 76
                667*******************986 PP

  == domain 2    score: 21.0 bits;  conditional E-value: 8.5e-08
                 HHHHHHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkea 25 
                 +++++F+++D D++GkI   Ef++a
  MMETSP1325-20131115|9763_1  85 DVDKIFQKIDLDHTGKIHWHEFLAA 109
                 589*******************986 PP

  == domain 3    score: 14.9 bits;  conditional E-value: 7.9e-06
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealk 27 
                 lk+aF+++D  + G I+ ++ +e++ 
  MMETSP1325-20131115|9763_1 121 LKQAFEHLDHEHKGVITRDDVQEIMG 146
                 89**********************96 PP

  == domain 4    score: 1.4 bits;  conditional E-value: 0.16
                 EBEHHHHHHHHHH CS
  PF00036.27  16 kIsfeEfkealkk 28 
                  I++e f++++++
  MMETSP1325-20131115|9763_1 165 EIDYEAFVNMCRS 177
                 59********987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   5.8e-09     8e-06       2      27 ..      51      76 ..      50      81 .. 0.92
   2 !   18.3   0.0   9.6e-07    0.0013       2      25 ..      86     109 ..      85     111 .. 0.91
   3 !   19.2   0.0   4.7e-07   0.00064       2      27 ..     121     146 ..     120     155 .. 0.93
   4 ?   -2.6   0.0       4.8   6.5e+03      14      27 ..     163     176 ..     158     178 .. 0.73

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 5.8e-09
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                lr+ F++fD+d++G+i+ +E+r +L+
  MMETSP1325-20131115|9763_1 51 LRHEFEKFDTDHSGEITVKEFREVLS 76
                6888********************98 PP

  == domain 2    score: 18.3 bits;  conditional E-value: 9.6e-07
                 HH---GCC-------B---HHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrda 25 
                 + ++F+++D d++Gki ++E+++a
  MMETSP1325-20131115|9763_1  86 VDKIFQKIDLDHTGKIHWHEFLAA 109
                 5799*****************976 PP

  == domain 3    score: 19.2 bits;  conditional E-value: 4.7e-07
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 l++aF+++D+ ++G i++++++ ++ 
  MMETSP1325-20131115|9763_1 121 LKQAFEHLDHEHKGVITRDDVQEIMG 146
                 789********************997 PP

  == domain 4    score: -2.6 bits;  conditional E-value: 4.8
                 ---B---HHHHHHH CS
   PF13405.1  14 dGkidaeELrdaLr 27 
                   +id e +++++r
  MMETSP1325-20131115|9763_1 163 RDEIDYEAFVNMCR 176
                 56788888877766 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.1   1.1e-14   1.5e-11       2      65 ..      51     109 ..      47     110 .. 0.89
   2 !   13.7   0.2   3.5e-05     0.047       2      35 ..     121     148 ..     120     182 .. 0.73

  Alignments for each domain:
  == domain 1    score: 44.1 bits;  conditional E-value: 1.1e-14
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                 l+ +F+++D+d++g +++ e++++l  +      ++++  +d+if+++D++++G++ + Efl+a
  MMETSP1325-20131115|9763_1  51 LRHEFEKFDTDHSGEITVKEFREVLSLS-----AHMKPSDVDKIFQKIDLDHTGKIHWHEFLAA 109
                 7889*********************987.....45666677777*****************975 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 3.5e-05
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsd 35 
                 lk+aF+ lD  + g +++++ ++++        d
  MMETSP1325-20131115|9763_1 121 LKQAFEHLDHEHKGVITRDDVQEIMGE------D 148
                 89********************99955......4 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   2.8e-06    0.0039      27      51 ..      51      75 ..      31      77 .. 0.92
   2 !   35.0   0.0   5.1e-12     7e-09       1      51 [.      62     110 ..      62     113 .. 0.87
   3 !    6.4   0.1    0.0045       6.1       1      21 [.     132     149 ..     132     174 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 2.8e-06
   PF13833.1 27 vdilfrefDtdgdGkisfeEFcvll 51
                +++ f +fDtd++G i+ +EF ++l
  MMETSP1325-20131115|9763_1 51 LRHEFEKFDTDHSGEITVKEFREVL 75
                6889*****************8876 PP

  == domain 2    score: 35.0 bits;  conditional E-value: 5.1e-12
   PF13833.1   1 ekGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvll 51 
                 ++G+It +e+++ l+l   + +++++vd +f ++D+d+ Gki++ EF+++ 
  MMETSP1325-20131115|9763_1  62 HSGEITVKEFREVLSL-SAH-MKPSDVDKIFQKIDLDHTGKIHWHEFLAAS 110
                 58**********6643.444.**************************9875 PP

  == domain 3    score: 6.4 bits;  conditional E-value: 0.0045
   PF13833.1   1 ekGlItreeLkralallglkg 21 
                 +kG+Itr++ ++++   g + 
  MMETSP1325-20131115|9763_1 132 HKGVITRDDVQEIM---GEDA 149
                 69***********9...7664 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   4.1e-08   5.6e-05       4      24 ..      54      74 ..      51      76 .. 0.87
   2 !   13.1   0.0     3e-05     0.041       2      21 ..      87     106 ..      86     110 .. 0.82
   3 ?    1.1   0.0      0.18   2.4e+02       1      22 [.     121     142 ..     121     145 .. 0.79

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 4.1e-08
                HHHHH--S----B-HHHHHHH CS
   PF13202.1  4 tFrafDlNgDGkIsreELkrl 24
                 F++fD++ +G I+ +E++++
  MMETSP1325-20131115|9763_1 54 EFEKFDTDHSGEITVKEFREV 74
                5******************96 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 3e-05
                 HHHHHHH--S----B-HHHH CS
   PF13202.1   2 kdtFrafDlNgDGkIsreEL 21 
                 +++F+++Dl+  GkI   E+
  MMETSP1325-20131115|9763_1  87 DKIFQKIDLDHTGKIHWHEF 106
                 569************66665 PP

  == domain 3    score: 1.1 bits;  conditional E-value: 0.18
                 HHHHHHHH--S----B-HHHHH CS
   PF13202.1   1 lkdtFrafDlNgDGkIsreELk 22 
                 lk++F+ +D    G I+r++ +
  MMETSP1325-20131115|9763_1 121 LKQAFEHLDHEHKGVITRDDVQ 142
                 6778999999999999998755 PP

>> PF02353.15  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00011      0.15      80     152 ..      30     110 ..      26     118 .. 0.88
   2 !   10.5   0.1   0.00015       0.2      98     174 ..     118     197 ..     108     210 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00011
                 HHHHH--EEE--BS-HHHHHHHHHHHHCS-SSS-B---B---TT---........--SEEEE---GGGT--TCHHHHHHHH CS
  PF02353.15  80 averydvkvvglTlSkeqaklakqrvdeldlerkvevklldyedlde........kvdrvvsvgafehvgkenydtffkkl 152
                 a +r   +vv+  l   q k  ++++++ d++++ e+++++++++           vd++     ++h gk ++++f ++ 
  MMETSP1325-20131115|9763_1  30 ALKRLALEVVAFSLEPSQIKSLRHEFEKFDTDHSGEITVKEFREVLSlsahmkpsDVDKIFQKIDLDHTGKIHWHEFLAAS 110
                 67788899************************************9766777888899***999999********9999875 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00015
                 HHHHHHHHHCS-SSS-B---B---TT-----SEEEE.-.--GGGT--TC..HHHHHHHHHHCS-----EEEEEEE---HHH CS
  PF02353.15  98 aklakqrvdeldlerkvevklldyedldekvdrvvs.v.gafehvgken..ydtffkklkkllkedGllllhtitslhkke 174
                 +++ kq++++ld e+k  ++  d +++ ++ d++ s + g+fe +g ++  y++f++++ +++ e G+l++++   +++k 
  MMETSP1325-20131115|9763_1 118 EAHLKQAFEHLDHEHKGVITRDDVQEIMGE-DALTSeIsGMFEELGRDEidYEAFVNMCRSTTMERGTLAVKAKGVRKSKV 197
                 468899********************9986.444432349******9854499*****************99887766654 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00015      0.21      50     111 ..      45     107 ..      15     109 .. 0.81
   2 ?    2.1   0.1      0.12   1.7e+02      51      97 ..     116     175 ..     108     182 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00015
   PF10591.4  50 keckeaveWkFnqlDtnkdkvlsksElaplraplvkle.hCikeffksCDadkdkkisleEWc 111
                 ++  ++++ +F+++Dt++ + ++ +E++++ +   +++ + +++ f++ D+d+ +ki ++E+ 
  MMETSP1325-20131115|9763_1  45 PSQIKSLRHEFEKFDTDHSGEITVKEFREVLSLSAHMKpSDVDKIFQKIDLDHTGKIHWHEFL 107
                 45667899*********99999998888765533444413489******************97 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.12
   PF10591.4  51 eckeaveWkFnqlDtnkdkvlsk.............sElaplraplvklehCikeffksC 97 
                   +  ++  F++lD ++ +v+++             sE++ + ++l + e   + f+++C
  MMETSP1325-20131115|9763_1 116 IDEAHLKQAFEHLDHEHKGVITRddvqeimgedaltSEISGMFEELGRDEIDYEAFVNMC 175
                 555667778999999999999995565555555555566666666555555555555555 PP

>> PF05517.7  p25-alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   0.00018      0.24       4      66 ..      54     109 ..      51     151 .. 0.77
   2 ?   -0.6   0.0      0.92   1.3e+03      16      42 ..     163     189 ..     151     213 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00018
   PF05517.7   4 aFkkFasfgkaekkemdsktfakllkdckvldkkvtatdvdiiFskvkaksarrityeqFkka 66 
                  F+kF    ++++ e++ k+f  +l     l+  ++ +dvd iF+k+   ++ +i +++F  a
  MMETSP1325-20131115|9763_1  54 EFEKF---DTDHSGEITVKEFREVLS----LSAHMKPSDVDKIFQKIDLDHTGKIHWHEFLAA 109
                 45555...899999999999877765....88899**********************999443 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.92
   PF05517.7  16 kkemdsktfakllkdckvldkkvtatd 42 
                 + e+d + f+++++ + +  +++  ++
  MMETSP1325-20131115|9763_1 163 RDEIDYEAFVNMCRSTTMERGTLAVKA 189
                 456666777777776665555444444 PP

>> PF09943.4  Uncharacterized protein conserved in archaea (DUF2175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00014      0.19      23      81 ..      98     155 ..      90     165 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00014
   PF09943.4  23 kgsvHyeCleeeaskklkedkeedlvvLlsledelleiivlkkeleqvaeseeikkvir 81 
                  g +H++ + ++  ++ ++d+++ + + ++l++e ++++++++ ++++  ++++ ++i+
  MMETSP1325-20131115|9763_1  98 TGKIHWHEFLAASVNRNQIDEAHLKQAFEHLDHE-HKGVITRDDVQEIMGEDALTSEIS 155
                 599***************************9876.777777888888877787777665 PP

>> PF04536.9  Repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0058       7.9       2      33 ..      43      71 ..      42     137 .. 0.80
   2 ?    3.9   0.1      0.03        41      83     115 ..     192     225 ..     185     227 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0058
                --HHHHHHH---HHHHHHTT----EEEEESB- CS
   PF04536.9  2 lseaerarleaavaelekktsgeivvvtvdsl 33
                l ++++++l+ + +++ +++sgei   tv+++
  MMETSP1325-20131115|9763_1 43 LEPSQIKSLRHEFEKFDTDHSGEI---TVKEF 71
                67999*******************...55555 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.03
                 -----HHHHHHHT.HHHHH------------HHH CS
   PF04536.9  83 vpdafwdeilael.vpgfkagryaeGlaaaveai 115
                 v ++++de+ a+  +++f+ag+ ae+l+ ++  +
  MMETSP1325-20131115|9763_1 192 VRKSKVDEAGAAAaAEKFRAGEAAEALIGGIGYL 225
                 667888888888889*************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       562  (0.0411059); expected 273.4 (0.02)
Passed bias filter:                      467  (0.0341574); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 1291.10
//
Query:       MMETSP1325-20131115|9765_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|9767_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        98  (0.00716793); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.59
# Mc/sec: 264.01
//
Query:       MMETSP1325-20131115|9769_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       488  (0.0356934); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 366.50
//
Query:       MMETSP1325-20131115|9770_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|9771_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       726  (0.0531012); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.60
# Mc/sec: 363.45
//
Query:       MMETSP1325-20131115|9772_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-07   30.7  10.8    6.7e-07   28.9   1.0    2.4  2  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   1.0   4.9e-11   6.7e-07       2      28 ..      58      85 ..      57      86 .. 0.87
   2 !    6.6   1.6   0.00047       6.4       3      21 ..      91     107 ..      89     110 .. 0.69

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 4.9e-11
                --S.EEE.E.E-.---EEEEETTT--EES CS
  PF00397.21  2 ppg.Weersddd.dGrvYYyNheTgetqW 28
                p+  We+++d + +G +YY+ ++Tg+t+W
  MMETSP1325-20131115|9772_1 58 PNAvWEAHTD-EtTGATYYFCASTGVTSW 85
                6677**9996.559*************** PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.00047
                 -SEEE.E.E----EEEEET CS
  PF00397.21   3 pgWeersddddGrvYYyNh 21 
                   W ++ + d G+ Y+yN 
  MMETSP1325-20131115|9772_1  91 TTWDQHEH-D-GKSYWYNR 107
                 44765443.4.*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 617.52
//
Query:       MMETSP1325-20131115|9773_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 352.67
//
Query:       MMETSP1325-20131115|9774_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|9775_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   12.9   0.0      0.066   12.9   0.0    1.2  1  PF04705.7 Thiostrepton-resistance methylase, N terminus


Domain annotation for each model (and alignments):
>> PF04705.7  Thiostrepton-resistance methylase, N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.8e-06     0.066      94     113 ..      35      54 ..       7      56 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.8e-06
                 -S-E-EEE------HHHHHH CS
   PF04705.7  94 akvfgiarvpraarladias 113
                     gia+vpr arl d+++
  MMETSP1325-20131115|9775_1  35 EILVGIAKVPREARLLDLQH 54 
                 4568*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 316.32
//
Query:       MMETSP1325-20131115|9776_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 1130.91
//
Query:       MMETSP1325-20131115|9777_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.52
# Mc/sec: 1336.43
//
Query:       MMETSP1325-20131115|9780_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|9779_1  [L=333]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 1628.54
//
Query:       MMETSP1325-20131115|9782_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|9781_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.44s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 551.16
//
Query:       MMETSP1325-20131115|9784_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-15   54.4   0.4    1.4e-14   53.9   0.3    1.3  1  PF02874.18 ATP synthase alpha/beta family, beta-barrel domain


Domain annotation for each model (and alignments):
>> PF02874.18  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.3     1e-18   1.4e-14      22      69 .]       2      48 ..       1      48 [. 0.93

  Alignments for each domain:
  == domain 1    score: 53.9 bits;  conditional E-value: 1e-18
                TTEEEEEEEEES-EEEEEEEEE-SSEEEEEEB---TT-B----EEEEE CS
  PF02874.18 22 ynalkvelvefgklvlgvalnlgddkVriiamgstdGlkrGdeVkdTG 69
                yna+++e  e++  v++v++ lgd+kVr+++m++tdGl+rG eV+dTG
  MMETSP1325-20131115|9784_1  2 YNAINIE-FEGKVIVCEVQQLLGDNKVRAVSMSATDGLQRGVEVIDTG 48
                9******.66577889*******************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 386.08
//
Query:       MMETSP1325-20131115|9785_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-19   70.1   0.2    1.5e-19   70.0   0.1    1.0  1  PF00069.20 Protein kinase domain
    6.7e-11   41.6   0.0      7e-11   41.6   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.011   15.3   0.0       0.28   10.7   0.0    1.9  2  PF01636.18 Phosphotransferase enzyme family
      0.012   14.5   0.0      0.014   14.3   0.0    1.0  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
      0.026   13.1   0.3      0.035   12.7   0.1    1.4  1  PF05445.6  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.1   5.4e-23   1.5e-19      62     136 ..       2      75 ..       1      79 [] 0.91

  Alignments for each domain:
  == domain 1    score: 70.0 bits;  conditional E-value: 5.4e-23
                 -EEEEEEESTEEEEEEE--SC-EHHHHHH.HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT-- CS
  PF00069.20  62 kllevfeekdelylvleyveggdlfdllk.kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkge 136
                 kl ev++e+del++v+ey+eg +l+++ k +++++ e +i++i++qi++gl+++H++g+ HrD+KpeN L++  ++
  MMETSP1325-20131115|9785_1   2 KLKEVIRENDELFFVFEYLEG-NLYEYSKkRDRHFPESKIRNIMYQIFQGLAFMHKHGFFHRDIKPENMLVK-GDT 75 
                 688999*************98.9999999788999************************************9.444 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   2.6e-14     7e-11      66     144 ..       3      78 ..       1      79 [] 0.92

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 2.6e-14
                 BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE CS
  PF07714.12  66 llgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvki 144
                 l  v+ ++++l++v+ey++ G+L+e+ +k+ ++++  +++ ++++qi +G+++++++ + Hrd+   N+L++ ++++k+
  MMETSP1325-20131115|9785_1   3 LKEVIRENDELFFVFEYLE-GNLYEYSKKR-DRHFPESKIRNIMYQIFQGLAFMHKHGFFHRDIKPENMLVK-GDTCKV 78 
                 5667889999*******96.89*******9.****************************************9.777776 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.012        32      70     108 ..      13      57 ..       3      59 .. 0.84
   2 ?   10.7   0.0    0.0001      0.28     166     183 ..      57      74 ..      54      78 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.012
                 EEEEEE---HHBCCT......CSHHHHHHHHHHHHHHHHHHHHHS CS
  PF01636.18  70 lfalleyvpgevler......klnarqlpallealaellaalhqa 108
                 lf+++ey++g  +e       + +++ ++++ +++ + la +h +
  MMETSP1325-20131115|9785_1  13 LFFVFEYLEGNLYEYskkrdrHFPESKIRNIMYQIFQGLAFMHKH 57 
                 799********9999999999899999999999999999988865 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.0001
                 -EEB-SS-SGGGEEEETT CS
  PF01636.18 166 pvllHgDlhpgNllvdpd 183
                 +++ H+D++p N+lv+ d
  MMETSP1325-20131115|9785_1  57 HGFFHRDIKPENMLVKGD 74 
                 5799***********933 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     5e-06     0.014     104     154 ..      23      74 ..      13      78 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 5e-06
   PF06293.9 104 dLaeilakwae.laeelkralleavGrliakmhragvnHtdlnahnilldee 154
                  L+e+ +k +  ++e++ r+++ ++ +  a mh+ g  H+d+ + n+l++ +
  MMETSP1325-20131115|9785_1  23 NLYEYSKKRDRhFPESKIRNIMYQIFQGLAFMHKHGFFHRDIKPENMLVKGD 74 
                 588999987668999999******************************9976 PP

>> PF05445.6  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.3e-05     0.035     296     315 ..      55      74 ..      35      79 .] 0.77

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.3e-05
   PF05445.6 296 dctnFlHvDlkPdniLvFds 315
                  ++ F+H D+kP+n+Lv  +
  MMETSP1325-20131115|9785_1  55 HKHGFFHRDIKPENMLVKGD 74 
                 5789************9655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|9789_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00011   20.7   0.7    0.00023   19.7   0.3    1.5  2  PF02487.12 CLN3 protein


Domain annotation for each model (and alignments):
>> PF02487.12  CLN3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.3   1.7e-08   0.00023       3      26 ..      73      96 ..      71     101 .. 0.91
   2 ?   -1.3   0.0     0.042   5.7e+02      56      72 ..     101     117 ..      96     119 .] 0.84

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.7e-08
  PF02487.12  3 vafwLlGLcnnfayvvmLsaaedi 26
                 afwL+GL+nn ++v+m+++a+ i
  MMETSP1325-20131115|9789_1 73 AAFWLMGLLNNSSFVIMIASAKAI 96
                69*******************987 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.042
  PF02487.12  56 taavLLadilPaLiikl 72 
                 ++ v L+d +P L++k 
  MMETSP1325-20131115|9789_1 101 VGLVYLCDTFPGLALKA 117
                 67899********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 619.93
//
Query:       MMETSP1325-20131115|9786_1  [L=494]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.82u 0.34s 00:00:01.15 Elapsed: 00:00:00.53
# Mc/sec: 2233.59
//
Query:       MMETSP1325-20131115|9791_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 653.12
//
Query:       MMETSP1325-20131115|9792_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|9787_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 541.58
//
Query:       MMETSP1325-20131115|9794_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-16   60.1   0.5      2e-16   60.0   0.3    1.0  1  PF00491.16 Arginase family


Domain annotation for each model (and alignments):
>> PF00491.16  Arginase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.3   1.4e-20     2e-16     206     257 ..       1      58 [.       1      59 [] 0.93

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 1.4e-20
                 GGS-TTTSTT--S-------HHHHHHHHHHHHH......CCEB---EEE---GGGSST CS
  PF00491.16 206 DvldpavapgtgtpepgGltlrellallrelas......klnvvglDvvEvnPaldee 257
                 Dvldpa+apgtgtpe+gGlt+  + +l+r+l        +l++ g+DvvEv+P+ld++
  MMETSP1325-20131115|9794_1   1 DVLDPAFAPGTGTPEVGGLTTLFAQQLIRGLGTtatgglELDILGADVVEVSPPLDHA 58 
                 9*****************************9556778889999*************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|9795_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 248.35
//
Query:       MMETSP1325-20131115|9797_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   14.2   0.0      0.014   14.2   0.0    1.0  1  PF12309.3 KIF-1 binding protein C terminal


Domain annotation for each model (and alignments):
>> PF12309.3  KIF-1 binding protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     1e-06     0.014     251     281 ..       2      32 ..       1      59 [. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1e-06
   PF12309.3 251 pkdhalkkinalcskaikayrafldtyekke 281
                 pk+ ++ k+n+  ++ i a++ f+d y+k++
  MMETSP1325-20131115|9797_1   2 PKAVEVAKVNQFLDEGIAAFQHFVDMYRKEK 32 
                 788899**********************544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 313.70
//
Query:       MMETSP1325-20131115|9799_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.23   11.2   8.5       0.34   10.7   5.9    1.2  1  PF06614.6 Neuromodulin


Domain annotation for each model (and alignments):
>> PF06614.6  Neuromodulin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   5.9   2.5e-05      0.34      16      64 ..       6      54 ..       2      65 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 2.5e-05
   PF06614.6 16 kgeaktateaaeaesakldepskdgssPaeekkgegaadkaseqpapqa 64
                +g a t ++a++  ++ +d+++++gssP   +kg++aa k +e  a  a
  MMETSP1325-20131115|9799_1  6 DGAAATVAAATAPVASAVDDGAANGSSPVAGRKGKAAAAKEKEGEAAAA 54
                57789999999999*********************99988888775443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|9801_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 418.27
//
Query:       MMETSP1325-20131115|9800_1  [L=290]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-09   35.5   1.1    4.5e-06   26.0   0.0    3.6  4  PF13414.1  TPR repeat
    2.3e-06   26.9   3.8       0.17   11.7   0.0    5.2  5  PF07719.12 Tetratricopeptide repeat
    1.9e-05   23.9   4.6      0.035   13.5   0.1    4.2  4  PF00515.23 Tetratricopeptide repeat
    7.5e-05   22.6   0.2     0.0061   16.5   0.1    2.9  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    0.00017   21.3   0.1     0.0097   15.7   0.0    3.2  3  PF13424.1  Tetratricopeptide repeat
     0.0014   18.8   0.7         38    4.9   0.0    4.7  5  PF13174.1  Tetratricopeptide repeat
     0.0019   18.7   6.1        0.1   13.2   0.0    4.1  4  PF13432.1  Tetratricopeptide repeat
     0.0036   16.8   3.1        6.8    6.6   0.0    4.7  5  PF13181.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.18   11.5   0.8         50    3.9   0.0    3.5  4  PF13176.1  Tetratricopeptide repeat
        0.4   11.3   7.6        3.7    8.3   0.0    4.5  6  PF13428.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.054        73      24      63 ..     108     152 ..      95     158 .. 0.68
   2 ?    3.7   0.1      0.03        41      16      51 ..     140     175 ..     125     200 .. 0.63
   3 ?    1.8   0.1      0.12   1.7e+02      12      28 ..     184     200 ..     179     219 .. 0.84
   4 !   26.0   0.0   3.3e-09   4.5e-06      21      63 ..     243     284 ..     241     288 .. 0.95

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.054
   PF13414.1  24 eayekAleldpnnae.....lyynlAlaylklgkdyeeAledyek 63 
                 e+++k  ++dp+  +     + + +A ++++  +d e  ++ +e+
  MMETSP1325-20131115|9800_1 108 ECFDKLEDIDPDGEIgqslsYKNTRACCLWQGQQDLEGSVAIFEE 152
                 577777788887544555546677999999944466666665555 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.03
   PF13414.1  16 egdydeAieayekAleldpnnaelyynlAlaylklg 51 
                 ++d++++++ +e+ l  +p+  ++  n+  +++++ 
  MMETSP1325-20131115|9800_1 140 QQDLEGSVAIFEEILLTNPDLESVDKNRKTVLMQMK 175
                 557777777777777777777777777766666663 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.12
   PF13414.1  12 alfkegdydeAieayek 28 
                 +l++e+++ eA+ea++k
  MMETSP1325-20131115|9800_1 184 ELLREKKLNEAEEALRK 200
                 68899999999999887 PP

  == domain 4    score: 26.0 bits;  conditional E-value: 3.3e-09
   PF13414.1  21 eAieayekAleldpnnaelyynlAlaylklgkdyeeAledyek 63 
                 eAi+++e Ale  p++ e++ n Al++++   ++++ le+++k
  MMETSP1325-20131115|9800_1 243 EAIQYFEIALEEKPDSIEALHNCALCLMQCR-QFDASLEYFDK 284
                 9****************************97.7********98 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.18   2.4e+02       7      24 ..      96     113 ..      91     119 .. 0.78
   2 ?    1.3   0.0      0.27   3.7e+02      10      33 ..     136     159 ..     130     160 .. 0.83
   3 ?    1.6   0.2      0.22     3e+02      11      26 ..     185     200 ..     184     201 .. 0.82
   4 !    6.3   0.0    0.0066         9      19      33 ..     243     257 ..     241     258 .. 0.91
   5 !   11.7   0.0   0.00012      0.17       2      26 ..     260     284 ..     259     285 .. 0.95

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.18
                 HHHHHHHTT-HHHHHHHH CS
  PF07719.12   7 lGlayyklgdyeeAleaf 24 
                  + a++k ++++e+ + +
  MMETSP1325-20131115|9800_1  96 EAIALMKEQKWDECFDKL 113
                 578999999999876655 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.27
                 HHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12  10 ayyklgdyeeAleafekAleldPn 33 
                 ++  ++d+e  ++ fe+ l  +P+
  MMETSP1325-20131115|9800_1 136 LWQGQQDLEGSVAIFEEILLTNPD 159
                 55668899***********99997 PP

  == domain 3    score: 1.6 bits;  conditional E-value: 0.22
                 HHHTT-HHHHHHHHHH CS
  PF07719.12  11 yyklgdyeeAleafek 26 
                 +++ ++++eA+ea++k
  MMETSP1325-20131115|9800_1 185 LLREKKLNEAEEALRK 200
                 5678899999999987 PP

  == domain 4    score: 6.3 bits;  conditional E-value: 0.0066
                 HHHHHHHHHHHH-TT CS
  PF07719.12  19 eAleafekAleldPn 33 
                 eA+++fe Ale  P+
  MMETSP1325-20131115|9800_1 243 EAIQYFEIALEEKPD 257
                 9**********9997 PP

  == domain 5    score: 11.7 bits;  conditional E-value: 0.00012
                 HHHHHHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12   2 ealynlGlayyklgdyeeAleafek 26 
                 eal+n +l++++ ++++  le+f+k
  MMETSP1325-20131115|9800_1 260 EALHNCALCLMQCRQFDASLEYFDK 284
                 89*********************98 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0         2   2.7e+03       9      20 ..      98     109 ..      96     118 .. 0.73
   2 ?    1.6   0.1      0.15     2e+02      12      26 ..     186     200 ..     183     200 .. 0.85
   3 !    7.6   0.0    0.0019       2.6      19      33 ..     243     257 ..     241     258 .. 0.92
   4 !   13.5   0.1   2.6e-05     0.035       2      27 ..     260     285 ..     259     285 .. 0.94

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 2
                 HHHHHTT-HHHH CS
  PF00515.23   9 naylklgkydeA 20 
                  a++k +k+de+
  MMETSP1325-20131115|9800_1  98 IALMKEQKWDEC 109
                 677777777774 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.15
                 HHTT-HHHHHHHHHH CS
  PF00515.23  12 lklgkydeAleyyek 26 
                 l+ +k++eA+e+ +k
  MMETSP1325-20131115|9800_1 186 LREKKLNEAEEALRK 200
                 67899******9987 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHHTT CS
  PF00515.23  19 eAleyyekALelnPn 33 
                 eA++y+e ALe  P+
  MMETSP1325-20131115|9800_1 243 EAIQYFEIALEEKPD 257
                 9***********998 PP

  == domain 4    score: 13.5 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHH CS
  PF00515.23   2 kalynlGnaylklgkydeAleyyekA 27 
                 +al n ++++++  ++d  ley++k+
  MMETSP1325-20131115|9800_1 260 EALHNCALCLMQCRQFDASLEYFDKV 285
                 799********************995 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.14     2e+02      27      51 ..      93     119 ..      79     152 .. 0.67
   2 ?   -0.2   0.0      0.71   9.7e+02      38      83 ..     188     200 ..     178     219 .. 0.67
   3 !   16.5   0.1   4.5e-06    0.0061       7      50 ..     243     284 ..     238     290 .] 0.84

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.14
                 CHHHHHHHHHH---HHHHHHHHHC...T CS
   PF12895.2  27 ylyalAlclylngeykrAyellrk...l 51 
                 +l+  A +l++ ++++++++ l++    
  MMETSP1325-20131115|9800_1  93 MLH-EAIALMKEQKWDECFDKLEDidpD 119
                 455.688999999999999999665442 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.71
                 ---HHHHHHHHHCTSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2  38 ngeykrAyellrkleldssslgcryllArcllklgkydeAiavLek 83 
                                                   +k++eA+++L k
  MMETSP1325-20131115|9800_1 188 E---------------------------------KKLNEAEEALRK 200
                 4.................................445555555544 PP

  == domain 3    score: 16.5 bits;  conditional E-value: 4.5e-06
                 HHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC CS
   PF12895.2   7 nAlflaekllaespkdpedaylyalAlclylngeykrAyellrk 50 
                 +A+ ++e +l+e p d + ++l++ Alcl++  ++++ +e+++k
  MMETSP1325-20131115|9800_1 243 EAIQYFEIALEEKP-D-SIEALHNCALCLMQCRQFDASLEYFDK 284
                 89**********99.4.55677888*************999965 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.43   5.9e+02       9      30 ..     130     152 ..     124     155 .. 0.62
   2 ?   -0.6   0.0      0.84   1.1e+03      20      37 ..     190     200 ..     181     227 .. 0.62
   3 !   15.7   0.0   7.1e-06    0.0097      23      71 ..     243     284 ..     241     285 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.43
   PF13424.1   9 nnlalvlr.rlgdydeAlelyek 30 
                 n  a++l+  ++d++ + +++e+
  MMETSP1325-20131115|9800_1 130 NTRACCLWqGQQDLEGSVAIFEE 152
                 55566666677777776666666 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.84
   PF13424.1  20 dydeAlelyekalellre 37 
                 ++ eA+e ++       +
  MMETSP1325-20131115|9800_1 190 KLNEAEEALR-------K 200
                 3444443333.......3 PP

  == domain 3    score: 15.7 bits;  conditional E-value: 7.1e-06
   PF13424.1  23 eAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylek 71 
                 eA++++e al       ++ pd   al+n+a ++++  ++d++ley+ k
  MMETSP1325-20131115|9800_1 243 EAIQYFEIAL-------EEKPDSIEALHNCALCLMQCRQFDASLEYFDK 284
                 5555555555.......778999************************88 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       4.3   5.9e+03       7      24 ..      97     114 ..      93     116 .. 0.61
   2 ?    4.5   0.0     0.036        50       7      32 ..     133     159 ..     132     159 .. 0.84
   3 ?    0.1   0.0      0.94   1.3e+03      13      26 ..     189     201 ..     182     202 .. 0.65
   4 ?    2.7   0.0      0.14   1.9e+02      18      33 .]     243     258 ..     238     258 .. 0.91
   5 ?    4.9   0.0     0.028        38       1      26 [.     260     285 ..     260     286 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 4.3
                 HHHHHH.HHHHHHHHHHHH CS
   PF13174.1   7 alsyyk.lgdtdeAleale 24 
                 a ++ k + ++de  + le
  MMETSP1325-20131115|9800_1  97 AIALMKeQ-KWDECFDKLE 114
                 55666635.8888766655 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.036
                 HHHHHH.HHHHHHHHHHHHHHHHH-TT CS
   PF13174.1   7 alsyyk.lgdtdeAlealerlikeyPd 32 
                 a ++ + ++d + +++++e+++   Pd
  MMETSP1325-20131115|9800_1 133 ACCLWQgQQDLEGSVAIFEEILLTNPD 159
                 567778678************988887 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.94
                 HHHHHHHHHHHHHH CS
   PF13174.1  13 lgdtdeAlealerl 26 
                   +  eA eal+++
  MMETSP1325-20131115|9800_1 189 K-KLNEAEEALRKF 201
                 3.666777777765 PP

  == domain 4    score: 2.7 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHH-TT- CS
   PF13174.1  18 eAlealerlikeyPdS 33 
                 eA++++e  ++e PdS
  MMETSP1325-20131115|9800_1 243 EAIQYFEIALEEKPDS 258
                 8**********99998 PP

  == domain 5    score: 4.9 bits;  conditional E-value: 0.028
                 HHHHHHHHHHHH.HHHHHHHHHHHHHH CS
   PF13174.1   1 dAlyklalsyyk.lgdtdeAlealerl 26 
                 +Al + al++ +   ++d++le+++++
  MMETSP1325-20131115|9800_1 260 EALHNCALCLMQcR-QFDASLEYFDKV 285
                 699999******99.*********997 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   3.9        10   1.4e+04      47      61 ..      33      48 ..      29      64 .. 0.63
   2 ?   -0.7   0.0       1.7   2.3e+03      10      29 ..     140     159 ..     132     169 .. 0.74
   3 ?    3.9   0.0     0.059        81       5      23 ..     183     201 ..     179     220 .. 0.83
   4 !   13.2   0.0   7.3e-05       0.1      14      56 ..     242     284 ..     241     286 .. 0.94

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 10
   PF13432.1 47 ldeAa.allraalala 61
                +++Aa a+ +aa+a a
  MMETSP1325-20131115|9800_1 33 PPAAAtAAEEAAVAPA 48
                5667756666666333 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1.7
   PF13432.1  10 aGdydeAlaaleaalalaPe 29 
                 ++d++  +a++e++l  +P+
  MMETSP1325-20131115|9800_1 140 QQDLEGSVAIFEEILLTNPD 159
                 56777777777777766664 PP

  == domain 3    score: 3.9 bits;  conditional E-value: 0.059
   PF13432.1   5 rallraGdydeAlaaleaa 23 
                  +llr +++ eA++al+++
  MMETSP1325-20131115|9800_1 183 TELLREKKLNEAEEALRKF 201
                 5799999999999999875 PP

  == domain 4    score: 13.2 bits;  conditional E-value: 7.3e-05
   PF13432.1  14 deAlaaleaalalaPeaaeallllaeallrlgrldeAaallra 56 
                  eA++++e al++ P+  eal + a +l++  ++d++++++++
  MMETSP1325-20131115|9800_1 242 PEAIQYFEIALEEKPDSIEALHNCALCLMQCRQFDASLEYFDK 284
                 69************************************99986 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.62   8.5e+02      14      32 ..     100     118 ..      97     119 .. 0.84
   2 ?    1.1   0.0      0.27   3.6e+02       8      32 ..     133     158 ..     127     160 .. 0.81
   3 ?   -0.5   0.1      0.92   1.3e+03      15      26 ..     189     200 ..     185     201 .. 0.79
   4 ?    4.1   0.0      0.03        41      19      33 ..     243     257 ..     241     258 .. 0.89
   5 !    6.6   0.0     0.005       6.8       2      27 ..     260     285 ..     259     285 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.62
                 TT-HHHHHHHHH---HHHH CS
   PF13181.1  14 lGdydkAkeylekalelkp 32 
                 l++  k  e++ k  +++p
  MMETSP1325-20131115|9800_1 100 LMKEQKWDECFDKLEDIDP 118
                 677889999****999998 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.27
                 --HHHH.TT-HHHHHHHHH---HHHH CS
   PF13181.1   8 GdiYrq.lGdydkAkeylekalelkp 32 
                 +++++q   d + + + +e++l  +p
  MMETSP1325-20131115|9800_1 133 ACCLWQgQQDLEGSVAIFEEILLTNP 158
                 6777777889999*******996666 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.92
                 T-HHHHHHHHH- CS
   PF13181.1  15 GdydkAkeylek 26 
                 ++  +A+e+l+k
  MMETSP1325-20131115|9800_1 189 KKLNEAEEALRK 200
                 677899999987 PP

  == domain 4    score: 4.1 bits;  conditional E-value: 0.03
                 HHHHHHH---HHHH. CS
   PF13181.1  19 kAkeylekalelkpr 33 
                 +A++y+e ale kp+
  MMETSP1325-20131115|9800_1 243 EAIQYFEIALEEKPD 257
                 8**********9985 PP

  == domain 5    score: 6.6 bits;  conditional E-value: 0.005
                 --TTT---HHHHTT-HHHHHHHHH-- CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeyleka 27 
                 +a++n +++++q  ++d+++ey+ k+
  MMETSP1325-20131115|9800_1 260 EALHNCALCLMQCRQFDASLEYFDKV 285
                 57788899***************996 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.3   1.7e+03       8      26 ..     136     154 ..     135     163 .. 0.79
   2 ?   -2.5   0.0         4   5.5e+03      12      20 ..     191     199 ..     180     203 .. 0.63
   3 ?    3.5   0.0      0.05        68      17      34 ..     243     258 ..     242     260 .. 0.82
   4 ?    3.9   0.0     0.037        50       1      24 [.     261     284 ..     261     289 .. 0.92

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 1.3
   PF13176.1   8 lysrlgdyekAielyeraL 26 
                 l++ ++d e  + ++e+ L
  MMETSP1325-20131115|9800_1 136 LWQGQQDLEGSVAIFEEIL 154
                 6888999999999999944 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 4
   PF13176.1  12 lgdyekAie 20 
                 l++ e+A++
  MMETSP1325-20131115|9800_1 191 LNEAEEALR 199
                 666666665 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.05
   PF13176.1  17 kAielyeraLaltkdpld 34 
                 +Ai+++e   al++ p+ 
  MMETSP1325-20131115|9800_1 243 EAIQYFEI--ALEEKPDS 258
                 8*******..88887765 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.037
   PF13176.1   1 allnLarlysrlgdyekAielyer 24 
                 al+n a + +++++++  +e++ +
  MMETSP1325-20131115|9800_1 261 ALHNCALCLMQCRQFDASLEYFDK 284
                 799******************987 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   1.5        10   1.4e+04      34      34 ..      50      50 ..      33      62 .. 0.44
   2 ?   -3.0   0.0        10   1.4e+04       8      16 ..      97     105 ..      91     118 .. 0.55
   3 ?    2.8   0.0      0.15   2.1e+02      14      33 ..     140     159 ..     132     165 .. 0.85
   4 ?    0.6   0.0      0.82   1.1e+03      11      27 ..     185     201 ..     181     216 .. 0.79
   5 ?    8.3   0.0    0.0027       3.7      19      42 ..     243     266 ..     241     268 .. 0.90
   6 ?   -0.7   0.0       2.2     3e+03      10      26 ..     268     284 ..     265     285 .. 0.83

  Alignments for each domain:
  == domain 1    score: -4.1 bits;  conditional E-value: 10
   PF13428.1 34 d 34
                d
  MMETSP1325-20131115|9800_1 50 D 50
                2 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 10
   PF13428.1   8 arallalGd 16 
                 a+al+  + 
  MMETSP1325-20131115|9800_1  97 AIALMKEQK 105
                 344444444 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.15
   PF13428.1  14 lGdpdeAiallrralalaPd 33 
                 ++d+++ +a ++++l ++Pd
  MMETSP1325-20131115|9800_1 140 QQDLEGSVAIFEEILLTNPD 159
                 5789***************8 PP

  == domain 4    score: 0.6 bits;  conditional E-value: 0.82
   PF13428.1  11 llalGdpdeAiallrra 27 
                 ll+   + eA+++lr+ 
  MMETSP1325-20131115|9800_1 185 LLREKKLNEAEEALRKF 201
                 56777889999999986 PP

  == domain 5    score: 8.3 bits;  conditional E-value: 0.0027
   PF13428.1  19 eAiallrralalaPddaealllLa 42 
                 eAi++++ al+  Pd+ eal++ a
  MMETSP1325-20131115|9800_1 243 EAIQYFEIALEEKPDSIEALHNCA 266
                 8******************98765 PP

  == domain 6    score: -0.7 bits;  conditional E-value: 2.2
   PF13428.1  10 allalGdpdeAiallrr 26 
                  l++  ++d+ ++++++
  MMETSP1325-20131115|9800_1 268 CLMQCRQFDASLEYFDK 284
                 578999*******9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       606  (0.0443242); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.67u 0.37s 00:00:01.04 Elapsed: 00:00:00.55
# Mc/sec: 1263.53
//
Query:       MMETSP1325-20131115|9802_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   25.7   0.0    2.9e-05   24.4   0.0    1.7  1  PF13432.1  Tetratricopeptide repeat
    6.6e-05   22.3   0.1    0.00011   21.6   0.0    1.4  1  PF13414.1  TPR repeat
    0.00058   19.4   0.0       0.91    9.4   0.0    2.7  2  PF07719.12 Tetratricopeptide repeat
     0.0015   18.4   0.0      0.003   17.5   0.0    1.5  1  PF13431.1  Tetratricopeptide repeat
     0.0027   17.1   0.0        0.8    9.2   0.0    2.7  2  PF00515.23 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.025   14.7   0.0      0.041   14.0   0.0    1.3  1  PF03704.12 Bacterial transcriptional activator domain
      0.051   13.2   0.1      0.086   12.5   0.0    1.3  1  PF05926.6  Phage head completion protein (GPL)
      0.061   13.1   0.0       0.19   11.5   0.0    1.9  1  PF13424.1  Tetratricopeptide repeat
      0.082   13.4   0.5        4.6    8.0   0.0    2.7  2  PF13428.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   1.9e-08   2.9e-05      15      62 ..      61     108 ..      47     110 .. 0.89

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 1.9e-08
   PF13432.1  15 eAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaP 62 
                 eAl+ + +a  l+Pe+  ++  l+++ +r ++ld+A++ ++ a ++ P
  MMETSP1325-20131115|9802_1  61 EALPMFAQAAQLDPENSGFWSDLGVTQMRTNNLDAALQSFQVADEILP 108
                 8****************************************9987766 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   7.4e-08   0.00011       3      64 ..      43     103 ..      38     108 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 7.4e-08
   PF13414.1   3 AealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekA 64 
                 A++l   +++l   g+  eA+ ++ +A +ldp+n   ++ l+ + ++ + + ++Al+ ++ A
  MMETSP1325-20131115|9802_1  43 AQKLHDNAMKLAIDGRELEALPMFAQAAQLDPENSGFWSDLGVTQMRTN-NLDAALQSFQVA 103
                 667777777777788888*****************************98.78****998765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1     0.003       4.5      14      34 .]      56      76 ..      43      76 .. 0.81
   2 !    9.4   0.0    0.0006      0.91       3      25 ..      79     101 ..      77     108 .. 0.92

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.003
                TT-HHHHHHHHHHHHHH-TTS CS
  PF07719.12 14 lgdyeeAleafekAleldPnn 34
                 g+  eAl  f +A +ldP+n
  MMETSP1325-20131115|9802_1 56 DGRELEALPMFAQAAQLDPEN 76
                577779*************97 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.0006
                 HHHHHHHHHHHTT-HHHHHHHHH CS
  PF07719.12   3 alynlGlayyklgdyeeAleafe 25 
                  +  lG   ++ ++++ Al+ f+
  MMETSP1325-20131115|9802_1  79 FWSDLGVTQMRTNNLDAALQSFQ 101
                 5999*****************98 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0     2e-06     0.003       1      34 []      65      98 ..      65      98 .. 0.94

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 2e-06
   PF13431.1  1 lyekaleldPnnadaynnLAelllnnGdleeAeq 34
                ++ +a +ldP+n+ ++  L+++  + ++l+ A+q
  MMETSP1325-20131115|9802_1 65 MFAQAAQLDPENSGFWSDLGVTQMRTNNLDAALQ 98
                57799**************************987 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.012        19      19      34 .]      61      76 ..      57      76 .. 0.94
   2 !    9.2   0.0   0.00053       0.8       4      25 ..      80     101 ..      79     101 .. 0.95

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.012
                HHHHHHHHHHHHHTTH CS
  PF00515.23 19 eAleyyekALelnPnn 34
                eAl  + +A +l+P+n
  MMETSP1325-20131115|9802_1 61 EALPMFAQAAQLDPEN 76
                89************97 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00053
                 HHHHHHHHHHTT-HHHHHHHHH CS
  PF00515.23   4 lynlGnaylklgkydeAleyye 25 
                 +  lG+++++ +++d Al+ ++
  MMETSP1325-20131115|9802_1  80 WSDLGVTQMRTNNLDAALQSFQ 101
                 899****************997 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.7e-05     0.041      75     126 ..      56     107 ..      31     110 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.7e-05
  PF03704.12  75 lgrheellaelealvalhPlrErlhrqlmrAlyrsGrqaeALevYrrlrrrL 126
                  gr+ e+l++ +++++l+P +  ++  l ++ +r+++  +AL+ ++ + + L
  MMETSP1325-20131115|9802_1  56 DGRELEALPMFAQAAQLDPENSGFWSDLGVTQMRTNNLDAALQSFQVADEIL 107
                 48999****************************************9877665 PP

>> PF05926.6  Phage head completion protein (GPL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.7e-05     0.086       3      52 ..      75     123 ..      75     142 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.7e-05
   PF05926.6   3 endgFwPdidlaefrkemrldgtvtaerlkeallaAiaevnaelaawkae 52 
                 en+gFw+d+ ++++r + +ld++++  ++++++l +   ++++l a++++
  MMETSP1325-20131115|9802_1  75 ENSGFWSDLGVTQMRTN-NLDAALQSFQVADEILPGQKLIQDNLDALQEH 123
                 69***********9875.8****************999999999988875 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00012      0.19      19      75 ..      57     106 ..      41     108 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00012
   PF13424.1  19 gdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                 g+  eAl ++ +a +l        p+    + +l+ ++++ +++d+Al+ ++ A ei
  MMETSP1325-20131115|9802_1  57 GRELEALPMFAQAAQLD-------PENSGFWSDLGVTQMRTNNLDAALQSFQVADEI 106
                 55568899999998883.......44456899********************99887 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0     0.003       4.6      19      42 ..      61      84 ..      52      86 .. 0.87
   2 ?    6.3   0.0      0.01        16       3      33 ..      79     109 ..      77     122 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.003
   PF13428.1 19 eAiallrralalaPddaealllLa 42
                eA+ ++ +a++l+P++  ++  L+
  MMETSP1325-20131115|9802_1 61 EALPMFAQAAQLDPENSGFWSDLG 84
                79***************9998776 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.01
   PF13428.1   3 allalarallalGdpdeAiallrralalaPd 33 
                  + +l+  +++ +++d+A++ ++ a +  P+
  MMETSP1325-20131115|9802_1  79 FWSDLGVTQMRTNNLDAALQSFQVADEILPG 109
                 6999****************99877666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       536  (0.0392042); expected 273.4 (0.02)
Passed bias filter:                      445  (0.0325483); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 789.39
//
Query:       MMETSP1325-20131115|9804_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 350.90
//
Query:       MMETSP1325-20131115|9807_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-17   62.0   0.0    5.3e-17   61.3   0.0    1.4  1  PF00271.26 Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.0   3.9e-21   5.3e-17      19      78 .]       2      61 ..       1      61 [. 0.98

  Alignments for each domain:
  == domain 1    score: 61.3 bits;  conditional E-value: 3.9e-21
                HHHHHHHHHHHHTTTSSEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
  PF00271.26 19 qnereeileqfnagkskvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78
                q++r++ l + ++++ +vl++++ ++rGidlp+v++V+n+d p    +y++r+GR++Rag
  MMETSP1325-20131115|9807_1  2 QKQRLDLLASCQRNDVNVLICSDGMSRGIDLPNVECVVNYDKPSYIKTYVHRVGRCARAG 61
                89********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 584.71
//
Query:       MMETSP1325-20131115|9806_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0016   17.8   0.0     0.0022   17.3   0.0    1.1  1  PF07059.7 Protein of unknown function (DUF1336)


Domain annotation for each model (and alignments):
>> PF07059.7  Protein of unknown function (DUF1336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.6e-07    0.0022       2      69 ..     165     231 ..     164     246 .. 0.79

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.6e-07
   PF07059.7   2 sepdpstfkvRgktYlkdkkKvpaeapllkligvdlfksskkldeiakqlelevqkaakkkvpfvlvv 69 
                 sep++++  +Rg tYl+d+ K+p+++ +++++g+ ++ ++   +   + + l ++ ++ ++ ++++vv
  MMETSP1325-20131115|9806_1 165 SEPPSENVLLRGPTYLEDRIKQPSKRAIFEPVGL-WVLQPGTEHLALNDPTLSAHVKRYADTEWFFVV 231
                 678889999************************8.555666566666777777777777788888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 1125.84
//
Query:       MMETSP1325-20131115|9809_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 267.83
//
Query:       MMETSP1325-20131115|9805_1  [L=479]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-20   70.4   2.9    1.5e-11   43.7   0.2    2.6  2  PF02225.17 PA domain
  ------ inclusion threshold ------
      0.021   14.5   0.1      0.047   13.4   0.1    1.5  1  PF07647.12 SAM domain (Sterile alpha motif)
      0.097   12.7   0.0       0.19   11.8   0.0    1.4  1  PF00536.25 SAM domain (Sterile alpha motif)


Domain annotation for each model (and alignments):
>> PF02225.17  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.1   6.6e-10     3e-06      27      93 ..     186     271 ..     142     278 .. 0.83
   2 !   43.7   0.2   3.4e-15   1.5e-11      11      98 ..     346     431 ..     339     434 .. 0.88

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 6.6e-10
  PF02225.17  27 laksdvkGkIvlvrrgvctfsekaevaqeaGAkgviiin...................pseaalpggtkvgpsdvgiPvvvisrad 93 
                 ++++++++ +   +rg+c+f++ka +  +aG +g+i+in                   + + ++   ++ +  ++++Pvv+++ ++
  MMETSP1325-20131115|9805_1 186 DDPEAIANTVTAAHRGNCSFVDKAGNLSAAGVAGIIVINnssemfqmaagyatgaagaAGTGNGQLKEDTSFIPTHLPVVMVKDTA 271
                 45566666666679*************************99999999999999999988888888888888999999999996554 PP

  == domain 2    score: 43.7 bits;  conditional E-value: 3.4e-15
  PF02225.17  11 vsagygisegsckdddlaksdvkGkIvlvrrgvctfsekaevaqeaGAkgviiin..pseaalpggtkvgpsdvgiPvvvisradgeall 98 
                 v      ++ ++++   + + ++G  ++ +rg+c f++k++  q+aGA+gvi+++      +  g ++++++ ++iP+ ++s+a+g++l 
  MMETSP1325-20131115|9805_1 346 V----KAAPFDGCSPLENSEVASGALIVAKRGGCAFGDKVMHGQAAGAAGVIVADttGAAIQRIGASADQARGITIPGLMVSKATGDELV 431
                 5....555667778888888889999999**************************887788899************************97 PP

>> PF07647.12  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1     1e-05     0.047       7      44 ..      59      96 ..      54     113 .. 0.94

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1e-05
                HHHHHHHHHT--CCSHHHHHHHTS-SCTCCCSSCHHHH CS
  PF07647.12  7 edvaeWLrsiglkqYtenFrdqgitggelllrlteedL 44
                ++vae L++++++ + + F ++g+t +  +lr++e dL
  MMETSP1325-20131115|9805_1 59 PTVAELLDNLQMPSFLDSFYNSGFTETFYILRMKETDL 96
                689**********************************9 PP

>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.1e-05      0.19       6      43 ..      59      97 ..      55      99 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.1e-05
                SSHHHHHHHTT-GGGHHHH.HCT--SHHHHTT--HHHHH CS
  PF00536.25  6 edVgeWLesiglgqYvdnF.rageidgdallllteedLe 43
                 +V+e L+ + ++   d+F ++g++    +l+++e dL+
  MMETSP1325-20131115|9805_1 59 PTVAELLDNLQMPSFLDSFyNSGFTETFYILRMKETDLR 97
                58***********************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.38s 00:00:01.19 Elapsed: 00:00:00.65
# Mc/sec: 1765.93
//
Query:       MMETSP1325-20131115|9810_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 264.09
//
Query:       MMETSP1325-20131115|9811_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|9812_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0019   18.3   0.0     0.0021   18.1   0.0    1.0  1  PF11543.3  Nuclear pore localisation protein NPL4
     0.0028   16.8   0.0     0.0039   16.3   0.0    1.1  1  PF00240.18 Ubiquitin family


Domain annotation for each model (and alignments):
>> PF11543.3  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   3.1e-07    0.0021       5      55 ..       9      60 ..       4      64 .. 0.86

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 3.1e-07
                ---EEE-----EE--.--SS--HHHHHHHHHHH------------S------ CS
   PF11543.3  5 iiiRvqSadGikRie.isekstlktllekvaeelkfsnngfslylernktte 55
                i++Rv+S+ G+ R++ + ++     l++++ ee  ++ +++ l+++   ++ 
  MMETSP1325-20131115|9812_1  9 ILVRVRSQLGMWRVSnVDPNDACGVLMKRIGEEHHVPVHQQTLSKDPAGNEP 60
                789***********637889999*********************99877665 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   5.8e-07    0.0039      11      38 ..      24      51 ..      21      53 .. 0.93

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 5.8e-07
                EECTTSBHHHHHHHHHHHHTS-GGGEEE CS
  PF00240.18 11 evepsdtvselKekieekegipvdqqrL 38
                 v+p+d    l+++i e++++pv+qq L
  MMETSP1325-20131115|9812_1 24 NVDPNDACGVLMKRIGEEHHVPVHQQTL 51
                699***********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 288.45
//
Query:       MMETSP1325-20131115|9813_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.7   0.0       0.12   11.6   0.0    1.0  1  PF09317.6 Domain of unknown function (DUF1974)


Domain annotation for each model (and alignments):
>> PF09317.6  Domain of unknown function (DUF1974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   8.7e-06      0.12     132     219 ..       3      92 ..       1     103 [. 0.80

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.7e-06
   PF09317.6 132 vewaledslakiekaldellaNfpnravavllr..vlvfplgrrvkkpsDklkrevAelllepseardrltagv.ylpedeedpvgrleka 219
                 ++w+l+ds a i++a   ++ N+p ++  + +r  ++  p+  +++ p  +l+++ A+  + ++++++  t+++  +++de+ +++++++ 
  MMETSP1325-20131115|9813_1   3 ASWSLHDSTAAIATAAAAAILNMPPPPSSCPVRneLVPDPFNSPMATPATALSAAAATN-VGDGAVKESSTDEMkSVDSDEGASTDEMKSV 92 
                 78******************************933345579999*****9998776655.5677788877777756666777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 474.75
//
Query:       MMETSP1325-20131115|9815_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|9817_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.017   15.0   0.1       0.02   14.8   0.0    1.1  1  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.4e-06      0.02       1      22 [.       5      27 ..       5      29 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.4e-06
   PF13516.1  1 lknLtsLdLsnNq.igdeGlsaL 22
                + nLt++dL+++  ++ +  saL
  MMETSP1325-20131115|9817_1  5 CANLTTIDLNFCRnVTADATSAL 27
                78**********669*9999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 167.74
//
Query:       MMETSP1325-20131115|9814_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0024   17.4   0.1     0.0031   17.1   0.0    1.1  1  PF13903.1 PMP-22/EMP/MP20/Claudin tight junction
  ------ inclusion threshold ------
      0.033   12.5   0.0      0.037   12.3   0.0    1.1  1  PF11700.3 Vacuole effluxer Atg22 like
      0.054   12.7   1.9       0.22   10.8   1.3    1.8  1  PF13567.1 Domain of unknown function (DUF4131)


Domain annotation for each model (and alignments):
>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   6.7e-07    0.0031      36     163 ..      54     181 ..      34     184 .. 0.72

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 6.7e-07
   PF13903.1  36 nnslfshlglwricfllevdvenesatalldltrvvivflllglvlillaavlallaslkksktlllltgvllllagilillavvlyvqkvqleikrnvqtwqsel..qnnvlaslgwSfylvvvgivlv 163
                 +  +++++ ++r+   ++ d+ n+++   ++ +++++++ ++ ++l + ++++ ++   +++ ++ l++ + +++ g+ + + +vly+ +  +e +++++t + ++     +++++ +  +l++ ++ ++
  MMETSP1325-20131115|9814_1  54 YDVDVEYEAYMRRLAEDDDDASNDNIVESKASRILGVGWGVF-ILLTVGGLFICICLVTCQPDCTGLNNPLQICMCGVYWYTLLVLYLVFADRE-DHYYDTKSGSDseALSWRYKYLFGVILFCGAFCSS 181
                 555566666677777777777777766666666666665554.355566667778************************************998.56677764444234555777778888888777655 PP

>> PF11700.3  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.2e-06     0.037     172     247 ..      70     143 ..      28     172 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8.2e-06
   PF11700.3 172 teseeeedksdeltetkisslglalgyigailvliisilvvialgstaegtlslrlvllivGlwwlvftipaflwl 247
                 + +++++d+  e + ++i ++g+++ ++  +  l+i+i +v+   +     l+  l+++++G+ w  + ++ +++ 
  MMETSP1325-20131115|9814_1  70 DDDDASNDNIVESKASRILGVGWGVFILLTVGGLFICICLVTCQPDC--TGLNNPLQICMCGVYWYTLLVLYLVFA 143
                 223334444445555********************999887655554..59999***********88855544444 PP

>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.3   4.8e-05      0.22      10      63 ..      88     187 ..      84     205 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 4.8e-05
   PF13567.1  10 aslplgllllalllalllllllflkr..............................................rkrrrlllllglllllaglylllrapqp 63 
                 +++++g+++l++++ l+++++l+  +                                                ++r  +l+g++l++++++  +++ + 
  MMETSP1325-20131115|9814_1  88 LGVGWGVFILLTVGGLFICICLVTCQpdctglnnplqicmcgvywytllvlylvfadredhyydtksgsdseALSWRYKYLFGVILFCGAFCSSVHYIWD 187
                 5688999999999999999999998899****99999999999999999999999999999999999999996666666666666666666666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1019.63
//
Query:       MMETSP1325-20131115|9818_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00055   19.4   0.0     0.0023   17.4   0.0    1.9  2  PF00578.16 AhpC/TSA family
     0.0047   16.3   0.0     0.0081   15.6   0.0    1.4  1  PF08534.5  Redoxin
  ------ inclusion threshold ------
      0.044   12.6   0.0      0.072   11.9   0.0    1.3  1  PF00837.12 Iodothyronine deiodinase


Domain annotation for each model (and alignments):
>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   5.1e-07    0.0023       1      35 [.      21      55 ..      21      66 .. 0.82
   2 ?   -1.0   0.0      0.26   1.2e+03     105     121 ..     169     185 ..     152     187 .. 0.74

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 5.1e-07
  PF00578.16  1 vgdkapdfelkdtdgkkvslsdl.kgkpvvLffypk 35
                vgd a df+l d dg++++ls++ ++kpvvL +  +
  MMETSP1325-20131115|9818_1 21 VGDSAFDFTLYDVDGNEYTLSTMlAEKPVVLIW-GM 55
                79*********************7778888865.44 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.26
  PF00578.16 105 kglalratfvidkegki 121
                 +gl  r++ +i ++g++
  MMETSP1325-20131115|9818_1 169 MGLGARTAMLISQDGTL 185
                 46679999****99987 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.8e-06    0.0081       2      42 ..      21      59 ..      20      73 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.8e-06
                --------S-----TT---EEHHH.HTTSEEEEE-------- CS
   PF08534.5  2 aGdkaPdftlplvatdgktvslsd.fkgkkvvlvfvpgafcp 42
                +Gd+a dftl++   dg++++ls  +++k+ v+ ++   +cp
  MMETSP1325-20131115|9818_1 21 VGDSAFDFTLYD--VDGNEYTLSTmLAEKP-VVLIWGMWTCP 59
                79*******988..**********888888.78888885566 PP

>> PF00837.12  Iodothyronine deiodinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.6e-05     0.072      86     182 ..      32     143 ..      18     156 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.6e-05
  PF00837.12  86 rlsgqrschildfaqgerPlvlnfGsctCPpf.....larlda..fk...rlveefssvadfllvyieeahpsdGWaitdds.......yeikkhqsledrlaaarllleraPg 182
                  ++g++    l  + +e+P+vl +G  tCP++     +  +d+  +k    lve +++++ f+ +   e hp       d+         ++++ ++ +dr++ ++ +l+   +
  MMETSP1325-20131115|9818_1  32 DVDGNE--YTLSTMLAEKPVVLIWGMWTCPAYqgmgtTYPFDQcgYKdewDLVESYKDTVTFVHLVGPEPHPLTPDTNFDSGkqlmnywSTVRQAKTYDDRITMTKKVLDYTHP 143
                 555555..556778899*************9933222223443224433359***********9999****9644443333333556547899*********999999987644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.59
# Mc/sec: 869.19
//
Query:       MMETSP1325-20131115|9820_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 217.45
//
Query:       MMETSP1325-20131115|9819_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-12   45.3   6.1    9.3e-12   45.3   4.2    2.6  2  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
  ------ inclusion threshold ------
      0.053   13.2   0.5      0.072   12.8   0.3    1.1  1  PF10211.4  Axonemal dynein light chain
      0.094   12.3   1.4        0.9    9.1   1.4    2.0  2  PF08286.6  Spc24 subunit of Ndc80
       0.12   11.6   0.2       0.19   11.0   0.1    1.3  1  PF05529.7  B-cell receptor-associated protein 31-like
          2    8.7   8.7       0.82    9.9   2.3    2.4  2  PF07361.6  Cytochrome b562
        4.1    7.8   8.9       0.33   11.3   1.9    2.2  2  PF00816.16 H-NS histone family


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   4.2   4.1e-15   9.3e-12      59     147 ..      57     148 ..       1     149 [. 0.67
   2 ?   -2.9   3.0       2.9   6.6e+03      86      86 ..     224     224 ..     175     265 .. 0.45

  Alignments for each domain:
  == domain 1    score: 45.3 bits;  conditional E-value: 4.1e-15
   PF10152.4  59 lpappaaarrsggpppppg.araeaaaqeaeaaraetpaeqe.....................pealaegrltvrkdpryakYfkmlklgVpaeavknKmqaeGldpelld 147
                 + ++++ a+r +++ ++++ ++                   +                       a+ae+   v++dp+++k+fkmlk+ +p++av +Km+aeGldp +ld
  MMETSP1325-20131115|9819_1  57 VAEMEKDAERIKQQEAEQAkSK-------------------TkevsgeagvagaegdatvgaaDGATAEAVCAVEDDPKFSKFFKMLKMHLPKPAVAMKMTAEGLDPAVLD 148
                 2222222222222222222111...................012222333444444555666677889999***************************************9 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 2.9
   PF10152.4  86 e 86 
                 +
  MMETSP1325-20131115|9819_1 224 A 224
                 1 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   3.2e-05     0.072     126     171 ..      40      85 ..      25      93 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 3.2e-05
   PF10211.4 126 ekeikkleeekeeLekevkelekkleeiekreeeereeeekkhade 171
                  +e ++   ++e+L+k+v+e+ek  e+i+++e e+ +++ k+ + e
  MMETSP1325-20131115|9819_1  40 SAELASSAMDIEKLQKQVAEMEKDAERIKQQEAEQAKSKTKEVSGE 85 
                 56677778899**************************999987655 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.4    0.0004       0.9      13      56 ..      41      81 ..      37      89 .. 0.78
   2 ?   -0.3   0.0      0.32   7.3e+02      93     110 ..     105     122 ..      93     123 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0004
   PF08286.6 13 kelndleselenlqseleelkeeleeleeqenegkeedeeeaee 56
                 el++  + +e+lq++++e+++  e +++qe e   + +++++e
  MMETSP1325-20131115|9819_1 41 AELASSAMDIEKLQKQVAEMEKDAERIKQQEAE---QAKSKTKE 81
                577888899**********************99...44444433 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.32
   PF08286.6  93 kgdvqvlnldnklSeffi 110
                  + v+ ++ d+k+S+ff+
  MMETSP1325-20131115|9819_1 105 AEAVCAVEDDPKFSKFFK 122
                 45688888899*****96 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   8.4e-05      0.19     153     187 ..      41      75 ..       5      81 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 8.4e-05
   PF05529.7 153 ekekklkeeveklkkeleekekdlealkkqaeglq 187
                 ++ ++++ ++ekl+k+++e ekd+e++k+q +++ 
  MMETSP1325-20131115|9819_1  41 AELASSAMDIEKLQKQVAEMEKDAERIKQQEAEQA 75 
                 566788999*******************9977655 PP

>> PF07361.6  Cytochrome b562
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.3   0.00036      0.82      15      50 ..      42      77 ..      37      86 .. 0.81
   2 ?    1.1   0.2       0.2   4.7e+02      27      48 ..     194     215 ..     186     250 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00036
   PF07361.6 15 kqaakaddaeelkealnklrsaaedakkkkppklee 50
                + a++a+d+e+l+++++++++ ae  k+++ ++ ++
  MMETSP1325-20131115|9819_1 42 ELASSAMDIEKLQKQVAEMEKDAERIKQQEAEQAKS 77
                55789*********************9999666555 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.2
   PF07361.6  27 kealnklrsaaedakkkkppkl 48 
                  +a+n l +a+++akk+kpp  
  MMETSP1325-20131115|9819_1 194 AAAANPLLAAIANAKKNKPPVS 215
                 5688889999999999996643 PP

>> PF00816.16  H-NS histone family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.9   0.00014      0.33       1      43 [.      51      93 ..      51     117 .. 0.83
   2 ?   -0.7   0.3       0.8   1.8e+03      13      43 ..     216     246 ..     195     263 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00014
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF00816.16  1 eeLealleklekeaeeaekkekkaalaeirelaaeyGltleel 43
                e+L+++ +++ek ae+ +++e+++a ++ +e+  e+G+  +e 
  MMETSP1325-20131115|9819_1 51 EKLQKQVAEMEKDAERIKQQEAEQAKSKTKEVSGEAGVAGAEG 93
                68***********************************987776 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.8
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF00816.16  13 eaeeaekkekkaalaeirelaaeyGltleel 43 
                 +a+ a++ +k+ a  ei  ++ e+G + +  
  MMETSP1325-20131115|9819_1 216 AAALAAADAKAGASVEISMKMVEDGANGASS 246
                 3444555566677777777777777664443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1588  (0.11615); expected 273.4 (0.02)
Passed bias filter:                      944  (0.0690462); expected 273.4 (0.02)
Passed Vit filter:                       126  (0.00921592); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.78u 0.37s 00:00:01.14 Elapsed: 00:00:00.55
# Mc/sec: 1163.32
//
Query:       MMETSP1325-20131115|9824_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|9828_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.9   4.5       0.15   11.9   3.1    1.1  1  PF06217.7 GAGA binding protein-like family
       0.25    9.4   9.9       0.22    9.6   6.9    1.1  1  PF06375.6 Bovine leukaemia virus receptor (BLVR)
        0.4   10.3   8.8       0.18   11.4   4.7    1.5  2  PF08496.5 Peptidase family S49 N-terminal
       0.88    9.0   7.1        1.3    8.5   4.9    1.3  1  PF04386.8 Stringent starvation protein B
        3.2    7.6   9.0       0.28   11.0   3.2    1.5  2  PF14181.1 YqfQ-like protein
        8.2    5.7  16.6         12    5.1  11.5    1.3  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF06217.7  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   3.1   6.4e-05      0.15      82     176 ..       5     107 ..       1     112 [] 0.48

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.4e-05
   PF06217.7  82 nkllalllvenspvgvqvlsetksihslqmlkh........pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkv 176
                 +++l +  +++s+ +++++ ++k   +  +l++         +++d ++  +    lea p+ ++a e+ e+k+  k +++ k+ +kk kk kk  +k+kk++
  MMETSP1325-20131115|9828_1   5 EQFLDNASKTKSKDNINSILKVKPKTTYGKLRQlllilstaMEIGDLPTTFEVLWALEASPVFKSAFEEVEAKQDAKDEKKDKKDKKKDKKDKKDDKKDKKDK 107
                 5555555555555555555555555555444444444444455666666666666667777777666666666655444333333333333333333333322 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.9   9.5e-05      0.22     191     224 ..      79     107 ..       2     112 .] 0.55

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 9.5e-05
   PF06375.6 191 dvplvekkskkkkkkekkekekerdkdkkkevek 224
                 d    ekk kk+kkk+kk+k+ +++  k   ++k
  MMETSP1325-20131115|9828_1  79 D-AKDEKKDKKDKKKDKKDKKDDKKD-K---KDK 107
                 1.222344444444444443333222.1...122 PP

>> PF08496.5  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.9   4.3e+03     118     125 ..      17      24 ..       6      36 .. 0.56
   2 ?   11.4   4.7   7.9e-05      0.18      61      98 ..      69     106 ..      43     111 .. 0.67

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.9
   PF08496.5 118 reeitail 125
                 +++i++il
  MMETSP1325-20131115|9828_1  17 KDNINSIL 24 
                 33344444 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 7.9e-05
   PF08496.5  61 alldkeelkalekeekkeekekkkaekkkakkaeekkp 98 
                 + +++ e+k+ +k+ekk++k+kkk++k+k++++++kk 
  MMETSP1325-20131115|9828_1  69 SAFEEVEAKQDAKDEKKDKKDKKKDKKDKKDDKKDKKD 106
                 55566677777777777777766666555544444443 PP

>> PF04386.8  Stringent starvation protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   4.9   0.00057       1.3     106     153 ..      67     111 ..      58     112 .] 0.50

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00057
                 EEEE-S---XXXX...........XXXXXXXXXXXXXXXXXXXXXXXX CS
   PF04386.8 106 fglkFeaeeaeeeeeeeeeeeekakeeeaeeakpeeeekekkkpsleV 153
                 f  +Fe+ ea++++++e+   +++k+++++++++++++k+kk++ +eV
  MMETSP1325-20131115|9828_1  67 FKSAFEEVEAKQDAKDEK---KDKKDKKKDKKDKKDDKKDKKDKVKEV 111
                 556777777776655443...222222222233333344555555555 PP

>> PF14181.1  YqfQ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.2   2.6e+03     129     130 ..      16      17 ..       2      34 .. 0.45
   2 ?   11.0   3.2   0.00012      0.28     112     146 ..      73     106 ..      48     112 .] 0.36

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 1.2
   PF14181.1 129 kk 130
                 +k
  MMETSP1325-20131115|9828_1  16 SK 17 
                 11 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00012
   PF14181.1 112 eeekeeeeetktekkekkkkevkkskkekekekee 146
                 e+e ++ ++ +++ k+  kk+ kk+kk ++k k+ 
  MMETSP1325-20131115|9828_1  73 EVEAKQDAKDEKKDKK-DKKKDKKDKKDDKKDKKD 106
                 2222222222111111.111111111111111111 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  11.5    0.0054        12      82     116 ..      75     109 ..      62     112 .] 0.47

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0054
   PF10500.4  82 eekrkkrkkkkkkrekkkekkekkklkkkgkkkea 116
                 e+k+  +++kk+k++kkk+kk kk  kk +k+k++
  MMETSP1325-20131115|9828_1  75 EAKQDAKDEKKDKKDKKKDKKDKKDDKKDKKDKVK 109
                 33444444444444444444444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1691  (0.123683); expected 273.4 (0.02)
Passed bias filter:                      754  (0.0551492); expected 273.4 (0.02)
Passed Vit filter:                       141  (0.010313); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.44s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 516.14
//
Query:       MMETSP1325-20131115|9829_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0097   15.4   0.2     0.0098   15.4   0.2    1.1  1  PF01018.17 GTP1/OBG
  ------ inclusion threshold ------
      0.018   14.6   0.0       0.02   14.4   0.0    1.0  1  PF10607.4  CTLH/CRA C-terminal to LisH motif domain


Domain annotation for each model (and alignments):
>> PF01018.17  GTP1/OBG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.2   1.4e-06    0.0098      29      66 ..      13      48 ..       9      66 .. 0.71

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.4e-06
                --------------EEEEE-----SSGGGGT--EEE-- CS
  PF01018.17 29 kGGPdGGdGGrGGdvilevdenldtLldfrykkhlkae 66
                 GGPdGG GG G +v   + +    L+d r+++ + a+
  MMETSP1325-20131115|9829_1 13 IGGPDGGGGGGGESVA--ASSAAVNLMDERQRHEIGAR 48
                7******999877775..44555678888877776665 PP

>> PF10607.4  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.9e-06      0.02      79     125 ..       1      60 [.       1      66 [. 0.87

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.9e-06
   PF10607.4  79 edamsLLafsdpas...............elssplknlldpsrrekvaeefnsailkllgls 125
                 e+am LLaf+                    +ss   nl+d  +r ++ + +n++il++++ +
  MMETSP1325-20131115|9829_1   1 EEAMLLLAFPA--RiggpdgggggggesvAASSAAVNLMDERQRHEIGARVNHEILSMHRPE 60 
                 689******98..4469********99998888999*********************99544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 302.94
//
Query:       MMETSP1325-20131115|9827_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-31  109.6   0.0    1.2e-31  109.4   0.0    1.0  1  PF00625.16 Guanylate kinase


Domain annotation for each model (and alignments):
>> PF00625.16  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.4   0.0   8.8e-36   1.2e-31       4     179 ..      28     209 ..      25     213 .. 0.91

  Alignments for each domain:
  == domain 1    score: 109.4 bits;  conditional E-value: 8.8e-36
                 EEEEE------HHHHHHHHHHH-TTTEE----EE-S--..-TTS------EE--HHHHHHHHHTT-BS----.BTTB----BHHHHHHHHHTT-EEEEE--CCHHHHHHCT..TT-EEEEEE.ECSHHHHHHH.TTS.HHHHHHHHHHHHHHHHHHGGG....-SEEEEE--HHHHHHHHHHH CS
  PF00625.16   4 pivlvGpsgvGkstlkkaLldelpekfgisvshtTrdp..rkgevdGkdYfFvskeelekdisaneflEaae.fsgnlygtskeaveeiaesgkiviLDvdiqgvkqlkka..elapilvfIkppslkelqrrlksrgkeqeekiakrleaaekelqeyae..Fdvvivnddldealkklkei 179
                 p+ l+Gp+g+G++++  +L +e+p  f  +v ht r+p    ge+dG +++F ske++++di++ +f+ +   ++g lygts ++ve ++   ki+++ +d++++   k      + ++vf++pp++++l +rl+ +g ++      ++ aae++l +++   Fd+v+ n  + +a + lk+ 
  MMETSP1325-20131115|9827_1  28 PLLLTGPEGSGRKSMLTKLEKEFPGMFETPVRHTCRPPlaALGETDGTHFHFTSKEHMTADIENGKFMHYEAdRHGILYGTSYASVEAVVSRSKICVICCDVDTAIATKDSrrFEELYAVFVRPPTMEALADRLRAMGMDEDLV-VSKAGAAEADLGHAKGphFDMVLANAVIKTAFATLKTQ 209
                 789**********************************944579**************************9877*************************999999888887752346789*******************987655.5668899*******8899***************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1054.40
//
Query:       MMETSP1325-20131115|9825_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       619  (0.045275); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.42s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 770.59
//
Query:       MMETSP1325-20131115|9830_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       571  (0.0417642); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.71
# Mc/sec: 259.89
//
Query:       MMETSP1325-20131115|9826_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-06   25.3   0.0    2.6e-05   23.6   0.0    1.8  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.049   13.5   0.0      0.083   12.8   0.0    1.3  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
      0.074   12.7   0.1       0.39   10.4   0.0    2.0  2  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
      0.082   11.8   0.5       0.13   11.1   0.3    1.3  1  PF01516.11 Orbivirus helicase VP6


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   7.6e-09   2.6e-05       2      66 ..     152     213 ..     151     216 .. 0.88

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 7.6e-09
                 EEESSTTTSSHHHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETT CS
  PF00076.17   2 fVgnLppdvteeeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklgg 66 
                  V+++ + + e ++ +++++  +++  + v++    s ++afV+F+see a+ Ale+l +++  g
  MMETSP1325-20131115|9826_1 152 CVRGFAQFTPEADVAQMMEHMQGYQTMNYVTK---GSAPIAFVKFASEELATTALEQLRNYTPPG 213
                 68999999999999999999999988888885...***********************9998776 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.4e-05     0.083       2      59 ..     152     206 ..     151     210 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.4e-05
   PF14259.1   2 yvrglppsvteedlreffsp...ygkvegvriprnkdgrgrgfAfvefeseedAqkalkkl 59 
                  vrg+ + + e+d+ ++++    y +  ++  ++     +   Afv+f+see A  al++l
  MMETSP1325-20131115|9826_1 152 CVRGFAQFTPEADVAQMMEHmqgYQTM-NYVTKG-----SAPIAFVKFASEELATTALEQL 206
                 566666655555555555540004433.333333.....3668**************9975 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.23   7.8e+02      25      45 ..     156     176 ..     149     183 .. 0.79
   2 ?   10.4   0.0   0.00012      0.39      23      56 .]     188     223 ..     179     223 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.23
   PF13893.1  25 fvefdtveaArkakeylngvk 45 
                 f +f  +++  +++e+++g +
  MMETSP1325-20131115|9826_1 156 FAQFTPEADVAQMMEHMQGYQ 176
                 666666789999****99976 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00012
   PF13893.1  23 qAfvefdtveaArkakeylngvkl..ygktLkveys 56 
                  Afv+f+++e A +a+e+l +     y + L v+y+
  MMETSP1325-20131115|9826_1 188 IAFVKFASEELATTALEQLRNYTPpgYEGALLVQYA 223
                 69*****************87664345567777776 PP

>> PF01516.11  Orbivirus helicase VP6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   3.9e-05      0.13      85     160 ..     116     192 ..     109     207 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3.9e-05
  PF01516.11  85 ssakgsgeradkdadrGdgkvrGGgGdadkgagatGtegG.gvvvlteeiaraieskyGtkidvyrdeasaqiiele 160
                  + +g g   d+   +Gd   +GG+G +  +   t + +G   +    ++a+ +e   G + + y  ++sa i +++
  MMETSP1325-20131115|9826_1 116 GGDRGGGGGGDRGGGGGDSDRGGGSGSSAPAPCDTICVRGfAQFTPEADVAQMMEHMQGYQTMNYVTKGSAPIAFVK 192
                 56677788888888889988899999888888888777662556667789999999999999999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1020.67
//
Query:       MMETSP1325-20131115|9831_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.2    8.7   4.9        1.7    8.2   3.4    1.3  1  PF08496.5 Peptidase family S49 N-terminal


Domain annotation for each model (and alignments):
>> PF08496.5  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.4   0.00013       1.7      47      84 ..      65     102 ..      47     103 .] 0.55

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00013
   PF08496.5  47 lneeykelkeeleealldkeelkalekeekkeekekkk 84 
                 l+ + +  ke  +++ ++k+++ + +k++kk++k+k+k
  MMETSP1325-20131115|9831_1  65 LSYQEEFWKEMTDKEATEKKQAAESKKAKKKKKKAKDK 102
                 44444444444444444445555555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2409  (0.1762); expected 273.4 (0.02)
Passed bias filter:                      836  (0.0611469); expected 273.4 (0.02)
Passed Vit filter:                       105  (0.00767993); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.44s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|9833_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0093   16.0   2.9      0.013   15.5   1.3    1.6  2  PF00264.15 Common central domain of tyrosinase


Domain annotation for each model (and alignments):
>> PF00264.15  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   1.3   9.5e-07     0.013     209     222 ..       3      16 ..       1      17 [. 0.93
   2 ?   -0.6   0.0     0.081   1.1e+03      77     107 ..      22      52 ..      18      58 .. 0.61

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 9.5e-07
                 HHHHHHHHHHHHHH CS
  PF00264.15 209 HHaniDrlwaiWqa 222
                 HHa+iD++wa+Wq+
  MMETSP1325-20131115|9833_1   3 HHAFIDKVWAMWQN 16 
                 *************6 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.081
                 HHHH-SEEE-TSST-....EEE-T..T---E CS
  PF00264.15  77 dlansaifdkepegkgggcvtnplysfkakd 107
                 + ++s+++d+++ g+g+g+  +  + f+ ++
  MMETSP1325-20131115|9833_1  22 EISTSSLTDTQYAGTGSGTGLDDTMVFNYPN 52 
                 5667788888888885555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.61
# Mc/sec: 231.78
//
Query:       MMETSP1325-20131115|9834_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.40s 00:00:00.67 Elapsed: 00:00:00.85
# Mc/sec: 177.61
//
Query:       MMETSP1325-20131115|9835_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.45s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 582.56
//
Query:       MMETSP1325-20131115|9837_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-06   24.5   0.0      0.001   18.1   0.0    2.3  2  PF00036.27 EF hand
    9.2e-06   25.0   0.1    0.00026   20.4   0.0    2.4  1  PF13405.1  EF-hand domain
      8e-05   22.5   0.0    0.00033   20.6   0.0    1.8  1  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   2.2e-07     0.001       2      28 ..      18      44 ..      17      45 .. 0.91
   2 !    4.3   0.0    0.0054        25      17      28 ..      65      76 ..      64      77 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 2.2e-07
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                l+ +F+++D  ++G Is  E+ ++l+k
  MMETSP1325-20131115|9837_1 18 LRGIFALYDPEKTGSISAAELESLLEK 44
                6779******************99987 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0054
                BEHHHHHHHHHH CS
  PF00036.27 17 IsfeEfkealkk 28
                +sf++f+++l+k
  MMETSP1325-20131115|9837_1 65 VSFDDFLDLLEK 76
                89******9986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   5.7e-08   0.00026       2      28 ..      18      44 ..      17      80 .. 0.92

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 5.7e-08
                HH---GCC-------B---HHHHHHH. CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLrk 28
                lr +F l+D  ++G i+a+EL ++L k
  MMETSP1325-20131115|9837_1 18 LRGIFALYDPEKTGSISAAELESLLEK 44
                7889*******************9985 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   7.2e-08   0.00033       2      63 ..      18      71 ..      14      74 .. 0.70

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 7.2e-08
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkn.gdGvlsfeEfl 63
                l+ +F l+D  ++g+++ +eL+ ll ++g+    ++++      ++ lD   g + +sf++fl
  MMETSP1325-20131115|9837_1 18 LRGIFALYDPEKTGSISAAELESLLEKIGYT---GDSK------VDILDAAqGMESVSFDDFL 71
                6779************************964...2222......2333433233355555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|9838_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 339.48
//
Query:       MMETSP1325-20131115|9840_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 379.42
//
Query:       MMETSP1325-20131115|9839_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.034   13.4   0.0      0.043   13.1   0.0    1.2  1  PF01789.11 PsbP


Domain annotation for each model (and alignments):
>> PF01789.11  PsbP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.1e-06     0.043     111     174 ..      36     104 ..       8     106 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.1e-06
                 EEEETTEEEEEEEEEEE---....--EEEEEEEEEE----EEEEEEEEEGGGHHH.HHHHHHHHHHT-B CS
  PF01789.11 111 ereadgktYYdlevlvklad....egdrhelatvtvergkLYtlklqtnekrwek.vkkllervvdSFs 174
                 + ++ ++ + +le++ ++ +    e  r+++++++ + + +  l  +++ +rw+k  +++++ +v+SF+
  MMETSP1325-20131115|9839_1  36 STTNPDTGFKELEFKFSALSptyaEVPRRAVVSAALKGDDVVMLVGGSTAARWSKgGEQTIRPIVSSFR 104
                 334445666677777776666666889****************************99999********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 833.52
//
Query:       MMETSP1325-20131115|9841_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 640.66
//
Query:       MMETSP1325-20131115|9842_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 285.08
//
Query:       MMETSP1325-20131115|9836_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-12   46.2   0.0    6.7e-12   44.9   0.0    1.7  2  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.0   4.9e-16   6.7e-12       2      84 ..      28     105 ..      27     106 .. 0.87
   2 ?   -2.3   0.0      0.27   3.7e+03       4      16 ..     268     280 ..     265     302 .. 0.74

  Alignments for each domain:
  == domain 1    score: 44.9 bits;  conditional E-value: 4.9e-16
                 EEEEEEESS--S-STSSSS-EEEEEEEECTTEEEEEE--BSS-SSEEEEEEEEEEESCGGGTEEEEEEEECHSSSCSEE---E CS
  PF00168.25   2 kvkvieAknLpnkdkngtsdpyvkvslggakskkkrTrvikntlnPvWnekftfevvaeelaeleleVkdedrfgkddflGea 84 
                 +vk+++A++Lp+  + gt+d+yv +++g    k++rT++ k t +P+Wne+f +   ++++++++ ++ + ++ + +  lG++
  MMETSP1325-20131115|9836_1  28 SVKICSATGLPQAASIGTPDAYVHLDFGV---KTFRTSIRKATRHPKWNETFDVR-LPDSVDSFTATITHGSSAE-HVPLGTV 105
                 79***************************...778********************.7777877877777777666.6666665 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.27
                 EEEEESS--S-ST CS
  PF00168.25   4 kvieAknLpnkdk 16 
                    +AknL + d 
  MMETSP1325-20131115|9836_1 268 GTTQAKNLLAEDR 280
                 5678999988773 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.40s 00:00:01.03 Elapsed: 00:00:00.52
# Mc/sec: 1649.80
//
Query:       MMETSP1325-20131115|9843_1  [L=326]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-34  118.1   0.2    1.5e-33  115.4   0.0    1.9  2  PF12781.2 ATP-binding dynein motor region D5


Domain annotation for each model (and alignments):
>> PF12781.2  ATP-binding dynein motor region D5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.4   0.0   1.1e-37   1.5e-33      67     227 ..       2     163 ..       1     164 [. 0.96
   2 ?    0.6   0.0     0.014   1.9e+02     122     172 ..     195     244 ..     191     247 .. 0.75

  Alignments for each domain:
  == domain 1    score: 115.4 bits;  conditional E-value: 1.1e-37
   PF12781.2  67 yldvieqaisegdtvlienleesidpvldpllgrntikkgr..yikigdkeveynpkfrlilhtklanphykpelqaqatlinftvtrdgledqllaavvakerpdleklksdltkqqnefkivlkeledsllsrlssasgnflgdtalvenleitkrtaaei 227
                 +++ +e a+  g+t+l+ +++  +dp+l pl  r+  k g    + +gdk +++n +fr+ + t+  np   p+  a ++ inf vtr gle qll   + +e+p+le  k ++ k+++ fk+ l +le +lls l+ a+gn+l +t l+e l  tk taa i
  MMETSP1325-20131115|9843_1   2 FVNQVELAVRFGKTLLLLDMD-GLDPMLYPLARRDLQKDGSrlCVTVGDKVMDWNENFRMCIVTRNPNPDLPPDASALVSEINFSVTRSGLEGQLLGVTIQHEQPELEAQKQEMLKKEEAFKVQLADLESNLLSALADAEGNLLENTPLIESLTQTKITAAAI 163
                 5678999************96.79***************97335789*****************************************************************************************************************988 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.014
   PF12781.2 122 frlilhtklanphykpelqaqatlinftvtrdgledqllaavvakerpdle 172
                 f l+ +   +np y+  l + +tl +  + +d l+ + + + +ak  p+le
  MMETSP1325-20131115|9843_1 195 FFLVAQLTSINPMYRFSLASFTTLFEQALDKD-LNTNSVEDRLAKLTPELE 244
                 6788888999**************99988877.444455555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       531  (0.0388385); expected 273.4 (0.02)
Passed bias filter:                      415  (0.030354); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.53
# Mc/sec: 1473.99
//
Query:       MMETSP1325-20131115|9846_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0083   15.6   0.1      0.013   14.9   0.1    1.4  1  PF06467.9  MYM-type Zinc finger with FCS sequence motif
  ------ inclusion threshold ------
      0.017   13.4   6.3       0.02   13.1   4.4    1.0  1  PF04006.7  Mpp10 protein
      0.019   14.9   1.0      0.029   14.3   0.7    1.2  1  PF04181.8  Rtr1/RPAP2 family
       0.03   14.0   0.6      0.067   12.9   0.4    1.5  1  PF01753.13 MYND finger
      0.074   11.0   7.8      0.077   11.0   5.4    1.0  1  PF03154.10 Atrophin-1 family
       0.19   11.4   2.1       0.32   10.7   1.2    1.6  1  PF02069.11 Prokaryotic metallothionein
       0.76    9.4   7.5        1.1    8.9   5.2    1.4  1  PF14235.1  Domain of unknown function (DUF4337)


Domain annotation for each model (and alignments):
>> PF06467.9  MYM-type Zinc finger with FCS sequence motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   6.8e-06     0.013       5      40 ..     118     147 ..     114     150 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 6.8e-06
   PF06467.9   5 vkkrCwfCkkyiktkptvyalendgvvgqFCStsCl 40 
                   k+C+ C   i++kp       +    ++CSt C+
  MMETSP1325-20131115|9846_1 118 AGKTCHSCAGVIQGKPF------ERLEFRYCSTACV 147
                 579*************7......************7 PP

>> PF04006.7  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   4.4     1e-05      0.02     536     571 ..      70     108 ..      52     123 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1e-05
   PF04006.7 536 kskeErdrtdkkreRrkkkrkkraek...Kavtkakkkr 571
                   k+E++r+ k+r+Rr+k+ k+r++k   K+ + a+ +r
  MMETSP1325-20131115|9846_1  70 AAKKEKEREKKARQRRRKREKEREAKqvaKEREAAEHAR 108
                 6799*******************7432334444444444 PP

>> PF04181.8  Rtr1/RPAP2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.7   1.5e-05     0.029      40      70 ..      82     150 ..      67     158 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.5e-05
   PF04181.8  40 rfeisskekkvyeredeeee.............................................kFCSkaCaeas 70 
                 r++  ++ek+++                                                     ++CS+aC++a 
  MMETSP1325-20131115|9846_1  82 RQRRRKREKERE-------AkqvakereaaeharvaaeeaailagktchscagviqgkpferlefRYCSTACVQAH 150
                 111111111111.......12334444556789999*************************************985 PP

>> PF01753.13  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.4   3.4e-05     0.067      11      33 ..     120     151 ..     113     153 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.4e-05
                 --EE----...........S--EESSHHHHHHHH CS
  PF01753.13  11 kllrCsgC...........ksvkYCskeCQradw 33 
                 k   C  C              +YCs++C +a+ 
  MMETSP1325-20131115|9846_1 120 K--TCHSCagviqgkpferLEFRYCSTACVQAHK 151
                 4..7999977777777766677*******99985 PP

>> PF03154.10  Atrophin-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   5.4     4e-05     0.077     598     639 ..      70     112 ..      59     154 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 4e-05
  PF03154.10 598 kareererekekek.erererereaeraakasssshesrlsea 639
                  a++e+erek+  +  r+re+erea++ ak   ++ ++r++ +
  MMETSP1325-20131115|9846_1  70 AAKKEKEREKKARQrRRKREKEREAKQVAKEREAAEHARVAAE 112
                 4677888887543337788888888888887777777776544 PP

>> PF02069.11  Prokaryotic metallothionein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.2   0.00016      0.32      10      41 ..     122     152 ..     118     159 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00016
  PF02069.11  10 cesClCvVsleeAikkdgkvYCseaCAsghkn 41 
                 c+sC  v++  +  ++    YCs+aC ++hk 
  MMETSP1325-20131115|9846_1 122 CHSCAGVIQ-GKPFERLEFRYCSTACVQAHKR 152
                 888888887.7788888899**********76 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   5.2   0.00058       1.1      68     112 ..      66     110 ..      28     118 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00058
   PF14235.1  68 aaelkkkiekykkekkrikseakeleakakeaeeesdealhkhhr 112
                 +a +++k ek +++k+r++++++e e++ak+  +e+++a+h    
  MMETSP1325-20131115|9846_1  66 DALIAAKKEKEREKKARQRRRKREKEREAKQVAKEREAAEHARVA 110
                 778899999999999**********************99997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1870  (0.136776); expected 273.4 (0.02)
Passed bias filter:                     1078  (0.0788473); expected 273.4 (0.02)
Passed Vit filter:                       172  (0.0125805); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.45
# Mc/sec: 873.34
//
Query:       MMETSP1325-20131115|9849_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.002   18.4   2.5     0.0044   17.4   0.5    2.1  2  PF13428.1  Tetratricopeptide repeat
      0.006   16.5   0.0     0.0081   16.1   0.0    1.2  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
  ------ inclusion threshold ------
      0.014   15.1   1.5      0.027   14.2   1.0    1.4  1  PF07719.12 Tetratricopeptide repeat
      0.022   13.7   0.0      0.022   13.6   0.0    1.2  1  PF13429.1  Tetratricopeptide repeat
      0.034   14.6   2.0      0.066   13.7   1.4    1.4  1  PF13432.1  Tetratricopeptide repeat
      0.055   13.7   1.2       0.11   12.9   0.8    1.5  1  PF07721.9  Tetratricopeptide repeat
      0.057   12.9   0.3      0.088   12.3   0.2    1.3  1  PF13414.1  TPR repeat
       0.08   12.7   0.7          6    6.8   0.1    2.3  2  PF13374.1  Tetratricopeptide repeat
       0.12   11.9   0.9       0.19   11.2   0.6    1.3  1  PF00515.23 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.5   2.9e-06    0.0044       4      41 ..      19      58 ..      17      66 .. 0.85
   2 ?    0.7   0.0      0.69     1e+03      24      43 ..      85     106 ..      79     107 .] 0.57

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 2.9e-06
   PF13428.1  4 llalarallalGdpdeAiallrrala..laPddaealllL 41
                l+a a+a+ ++Gd+++A+++l r+ +  ++ +d+++l++L
  MMETSP1325-20131115|9849_1 19 LAAKAEAHYNAGDYAKALDALHRIEStiADKQDPRLLHNL 58
                56779*******************9944467888888765 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.69
   PF13428.1  24 lrr.alalaPdda.ealllLar 43 
                 lr+ + +++Pd+  +  ++La+
  MMETSP1325-20131115|9849_1  85 LRAkLERDHPDSSdDMETELAQ 106
                 5551445679875144477776 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   5.3e-06    0.0081      24      51 ..      15      44 ..       2      62 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 5.3e-06
                HHHCHHHHHHHHHH---HHHHHHHHHC..T CS
   PF12895.2 24 edaylyalAlclylngeykrAyellrk..l 51
                +++ l a+A+++y++g+y +A+++l++   
  MMETSP1325-20131115|9849_1 15 SNSDLAAKAEAHYNAGDYAKALDALHRieS 44
                56678899*****************77541 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.0   1.8e-05     0.027       6      26 ..      21      41 ..      18      43 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.8e-05
                HHHHHHHHTT-HHHHHHHHHH CS
  PF07719.12  6 nlGlayyklgdyeeAleafek 26
                + ++a+y++gdy++Al+a+ +
  MMETSP1325-20131115|9849_1 21 AKAEAHYNAGDYAKALDALHR 41
                689**************9876 PP

>> PF13429.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.5e-05     0.022       9      45 ..      16      53 ..       9      91 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.5e-05
   PF13429.1  9 nealkl.AnllyakgdfkkAlevLksaadkaapskdee 45
                n  l++ A+ +y+ gd++kAl++L++   ++a+++d  
  MMETSP1325-20131115|9849_1 16 NSDLAAkAEAHYNAGDYAKALDALHRIESTIADKQDPR 53
                6667667*****************99999998777765 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.4   4.4e-05     0.066       2      23 ..      21      42 ..      20      44 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.4e-05
   PF13432.1  2 alArallraGdydeAlaaleaa 23
                a+A+a ++aGdy++Al+al ++
  MMETSP1325-20131115|9849_1 21 AKAEAHYNAGDYAKALDALHRI 42
                79*****************987 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.8   7.1e-05      0.11       5      26 .]      20      41 ..      19      41 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 7.1e-05
                ---HHHHHH-------HHHHHT CS
   PF07721.9  5 laLArallalGdldeAraller 26
                +a A+a++ +Gd++ A+++l+r
  MMETSP1325-20131115|9849_1 20 AAKAEAHYNAGDYAKALDALHR 41
                678***************9986 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   5.8e-05     0.088       6      43 ..      19      58 ..      17      64 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.8e-05
   PF13414.1  6 lkelGnalfkegdydeAieayekAle..ldpnnaelyynl 43
                l ++++a++++gdy++A++a+ +  +   d++++ l+ nl
  MMETSP1325-20131115|9849_1 19 LAAKAEAHYNAGDYAKALDALHRIEStiADKQDPRLLHNL 58
                567999*************998887743477788777775 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.1    0.0039         6       9      27 ..      23      41 ..      18      45 .. 0.88
   2 ?    4.2   0.0     0.026        40      30      42 .]      80      95 ..      71      95 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0039
   PF13374.1  9 AlalrargryeeAlaleee 27
                A a+++ g+y++Al+ +++
  MMETSP1325-20131115|9849_1 23 AEAHYNAGDYAKALDALHR 41
                6799**********98876 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.026
   PF13374.1 30 airrrl...lGddHPd 42
                ai+++l   l++dHPd
  MMETSP1325-20131115|9849_1 80 AIKQQLrakLERDHPD 95
                6666666668*****8 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.6   0.00012      0.19       7      26 ..      22      41 ..      19      42 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00012
                HHHHHHHTT-HHHHHHHHHH CS
  PF00515.23  7 lGnaylklgkydeAleyyek 26
                ++ a+++ g+y +Al++  +
  MMETSP1325-20131115|9849_1 22 KAEAHYNAGDYAKALDALHR 41
                799*************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 545.55
//
Query:       MMETSP1325-20131115|9848_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-48  164.3   0.0    3.7e-48  164.0   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.0   0.0   2.7e-52   3.7e-48     517     695 ..       9     193 ..       4     203 .. 0.95

  Alignments for each domain:
  == domain 1    score: 164.0 bits;  conditional E-value: 2.7e-52
  PF03028.10 517 kallkdkvPasWakkaypslkgLaswlsdllkRikqlekwtedllkpktvwlsglfnpqsfltairQsvarknkwpLdklalqvevtkkekeetesapeegvyveGlfleGarwdlkekllaesklkellsalpviwvkaveadkkeeksvyecPvYktkaRke........ltlvltlklktkekk 695
                 ++++++ vP+ W+k aypslk+L+ w+ dll+R++++ +w e+  +p ++wlsg+f+pq+f+ta  Q+ ark+ +p+d++ +  e++    ++ +++p +g+y++GlfleG rwd+++  l++ ++kel+s++pvi++ + + +++ ++ +y+c vYk  +R++        +++v+ l + +++ +
  MMETSP1325-20131115|9848_1   9 RSMYNQFVPDLWSKVAYPSLKPLNPWFDDLLRRLNFIGDWIEH-NQPPVFWLSGFFFPQGFMTANLQNHARKYGLPIDTVSFCHEMMADPLDDLTAQPPDGCYIHGLFLEGGRWDRRKRSLVDPRPKELFSPMPVIHLVPEQYKQEPTEGIYRCGVYKILTRAGvlsttghsTNFVFWLAVPSNK-P 193
                 58999*************************************9.9***********************************************************************************************************************999999999999999998877.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 997.76
//
Query:       MMETSP1325-20131115|9851_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 311.02
//
Query:       MMETSP1325-20131115|9850_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 699.35
//
Query:       MMETSP1325-20131115|9852_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.035   14.0   1.4      0.063   13.2   0.8    1.6  2  PF12392.3 Collagenase


Domain annotation for each model (and alignments):
>> PF12392.3  Collagenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.8   4.6e-06     0.063      44      81 ..      40      76 ..       5      87 .. 0.82
   2 ?   -1.6   0.0      0.18   2.5e+03     102     110 ..      79      87 ..      77      92 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.6e-06
   PF12392.3 44 dedgasvtvasevaleeArkkplteedlrkqlgklGnt 81
                 e g++++ a+  a + A+++++++e l++ql + G+ 
  MMETSP1325-20131115|9852_1 40 GEGGRAAEGAERSAAQ-AEERAVQAEVLNEQLLRIGQL 76
                5788999999999988.*******************85 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.18
   PF12392.3 102 elnelRRea 110
                  ln++RR+ 
  MMETSP1325-20131115|9852_1  79 DLNNARRDI 87 
                 69999*985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       695  (0.0508338); expected 273.4 (0.02)
Passed bias filter:                      513  (0.0375219); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 498.44
//
Query:       MMETSP1325-20131115|9847_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|9853_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.06   13.6   7.8      0.087   13.1   5.4    1.4  1  PF00428.14 60s Acidic ribosomal protein
      0.069   11.3   0.0      0.077   11.1   0.0    1.1  1  PF03362.8  Herpesvirus UL47 protein


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   5.4   1.3e-05     0.087      23      71 ..      61     109 ..      35     118 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.3e-05
  PF00428.14  23 lkllvkalegkdikeliangsaklaaaaaaaaaaaaaaaaaaaaeeekk 71 
                 +++  +  +g  i++++++g+a l a aaa  aaaa ++aa+ aeee++
  MMETSP1325-20131115|9853_1  61 PSVYQAIPTGGIIRSALTKGAARLNADAAADVAAAALDEAADGAEEEEE 109
                 5566667778889999999998876555555555555555555554444 PP

>> PF03362.8  Herpesvirus UL47 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   1.1e-05     0.077     101     147 ..      31      77 ..       7      82 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.1e-05
   PF03362.8 101 rsaekgsnlkllsalqplpaaaaellearglrvpergPtaavfRasl 147
                  ++   +++++++ ++++++++ae + ++  +v +  Pt +++R++l
  MMETSP1325-20131115|9853_1  31 ANLHTADQKWIETMMPKVEKRMAEEFTWKMPSVYQAIPTGGIIRSAL 77 
                 5667889**************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 581.97
//
Query:       MMETSP1325-20131115|9855_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.7    7.5   7.6       0.49    9.8   2.6    1.7  2  PF11395.3 Protein of unknown function (DUF2873)
        8.3    5.9   9.8          9    5.7   6.8    1.1  1  PF11755.3 Protein of unknown function (DUF3311)


Domain annotation for each model (and alignments):
>> PF11395.3  Protein of unknown function (DUF2873)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.14   9.8e+02      19      24 ..       3       8 ..       1      18 [. 0.51
   2 ?    9.8   2.6   7.2e-05      0.49       9      28 ..      22      41 ..      16      48 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.14
   PF11395.3 19 FLvLim 24
                 Lv i+
  MMETSP1325-20131115|9855_1  3 VLVQIL 8 
                344443 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 7.2e-05
   PF11395.3  9 FYLCFLaFLLFLvLimLiiF 28
                 YL  + F+LFLvL+++++ 
  MMETSP1325-20131115|9855_1 22 LYLGSVPFVLFLVLVLVLVQ 41
                799999*********98875 PP

>> PF11755.3  Protein of unknown function (DUF3311)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.8    0.0013         9       2      50 ..       1      49 [.       1      50 [] 0.90

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0013
   PF11755.3  2 illlipvvalllvlpfynrveprllGlPffywwqflwvvltsvltalay 50
                +l+l+ ++a++++  ++n  + +l+ +Pf ++  +++v++  + +a+a+
  MMETSP1325-20131115|9855_1  1 VLVLVQILAVVSLKILFNTAQLYLGSVPFVLFLVLVLVLVQILALAVAV 49
                58999999999999999999999999************99999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       901  (0.0659011); expected 273.4 (0.02)
Passed bias filter:                      505  (0.0369368); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|9854_1  [L=477]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-82  275.4   0.0    4.6e-82  274.8   0.0    1.3  1  PF01409.15 tRNA synthetases class II core domain (F)
    1.3e-05   24.0   0.2    3.3e-05   22.7   0.0    1.7  2  PF00152.15 tRNA synthetases class II (D, K and N)
    0.00015   21.3   0.2    0.00025   20.5   0.1    1.4  1  PF00587.20 tRNA synthetase class II core domain (G, H, P, S and T)


Domain annotation for each model (and alignments):
>> PF01409.15  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  274.8   0.0     1e-85   4.6e-82       5     243 ..     190     467 ..     186     471 .. 0.95

  Alignments for each domain:
  == domain 1    score: 274.8 bits;  conditional E-value: 1e-85
  PF01409.15   5 tlpgkrieagklhpltkvleeikeiflelgfeeve.gpevesefynfdaLnipqdhpaRdmqdtFylkkpeka................................eekkllLRthttavqartl........aekkkppikiisigrvfRrdavDathlaeFhqveglvvdenvsladlkgvleeflkklfgaevkvrfrpsyfpftePsaevdvylvvekkkkwlEllgaGmvrpevleavgideevsgfafGlGveRlamlkygieDiRelyen..dlrf 243
                 +  g+ +  g  hpl kv+ e+++i++++gfee+  ++ ves+f+nfd L++pq+hpaRd++dtF++k+p+++                                e+ k+lLRthtta++  +l        a+    p k++si+rvfR++++D thl eFhqveglv+d+n+sl++l+g++++f++++ g + ++rf+p+++p+tePs+ev+ ++  ++ +kw E++++Gm+rpe+l+++g++ +v+++a+Gl++eR +m+ky i +iR+l+ +  dl++
  MMETSP1325-20131115|9854_1 190 DSLGAAVGGGYFHPLLKVRAEFRRILMNMGFEEMPtNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKSPASTltvpedyyervktmhetgghgsigyrydfkqeEAFKNLLRTHTTAISSSMLyrlandfkATGVFTPKKYFSIDRVFRNESMDNTHLCEFHQVEGLVADRNLSLKHLIGMIRTFFEAI-GIT-QLRFKPAFNPYTEPSMEVFGFH--PDLGKWTEIGNSGMFRPEMLAPMGLPPDVRVIAWGLSLERPTMIKYRIRNIRDLFGHkvDLNM 467
                 555677778999**********************98999*********************************9******************************998889***************9998877666667*****************************************************.**9.********************99..*******************************************************99555555 PP

>> PF00152.15  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0      0.94   4.3e+03      28      46 ..     207     225 ..     206     231 .. 0.84
   2 !   22.7   0.0   7.2e-09   3.3e-05      94     147 ..     329     379 ..     320     411 .. 0.77

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 0.94
                 HHHHHHHHHHHTT-EE--- CS
                 xxxxxxxxxxxxxxxxxxx RF
  PF00152.15  28 iikairefldergFleveT 46 
                 + +++r++l + gF e+ T
  MMETSP1325-20131115|9854_1 207 VRAEFRRILMNMGFEEMPT 225
                 6678999999999999876 PP

  == domain 2    score: 22.7 bits;  conditional E-value: 7.2e-09
                 SEEEEEEEEE----S-STT-SSEEEEEEEEECT-SHHHHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PF00152.15  94 drvfqiarcFRdEdlradrhppEFtqldlEmsfvdeedvmklveelikevvkkv 147
                 +++f i r+FR+E++ +++h+ EF q++     +d++  +k +  +i++ ++++
  MMETSP1325-20131115|9854_1 329 KKYFSIDRVFRNESM-DNTHLCEFHQVEG--LVADRNLSLKHLIGMIRTFFEAI 379
                 79*************.**********975..44555556666666666666655 PP

>> PF00587.20  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   5.4e-08   0.00025      82     149 ..     327     387 ..     204     394 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 5.4e-08
                 -SEEEEE-EEEE---SSTT..--S-SEEEEEEEEEEE-CCCHHHHHHHHHHHHHHHHHHCT-GGEEEE CS
  PF00587.20  82 lPlklaqigkvfRnEisprsGliRvReFtqaeieifvdpeksneeleellalikqfleklgieklrfr 149
                 +P k+++i +vfRnE  +    + + eF+q+e  +  ++      l++l+ +i++f+e++gi++lrf+
  MMETSP1325-20131115|9854_1 327 TPKKYFSIDRVFRNESMDN---THLCEFHQVEGLVADRN----LSLKHLIGMIRTFFEAIGITQLRFK 387
                 8**************5444...7789******9877665....88*****************999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.33s 00:00:01.14 Elapsed: 00:00:00.53
# Mc/sec: 2156.72
//
Query:       MMETSP1325-20131115|9857_1  [L=328]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.3   5.5       0.16   11.7   0.3    2.2  2  PF13863.1 Domain of unknown function (DUF4200)


Domain annotation for each model (and alignments):
>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.4    0.0035        48      44      92 ..       3      51 ..       1      59 [. 0.87
   2 ?   11.7   0.3   1.2e-05      0.16      30      88 ..     122     180 ..     117     185 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0035
   PF13863.1 44 lqeslikfnkflkdneakreraekkaeeekkekkekeeeikklkaqlee 92
                + +++ + n+++ +   k  +a+k+      e++ +e++ik l ++l+ 
  MMETSP1325-20131115|9857_1  3 ILDDFREQNNMVINERRKSAQARKALLGSGAERQLLEQQIKLLLNDLNT 51
                6688999999999999999*******9999**********999998876 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 1.2e-05
   PF13863.1  30 lkereeelekkqeelqeslikfnkflkdneakreraekkaeeekkekkekeeeikklka 88 
                 l++ +e ++++++ l+++++++   l+d +a r ra+ +a++   ++ke+ e  ++l++
  MMETSP1325-20131115|9857_1 122 LEAVRELFRDEERSLKDEVEEIMALLEDEDADRSRALAEADAPVPSNKELREYGAQLQK 180
                 5677888999********************************99999999988888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       656  (0.0479813); expected 273.4 (0.02)
Passed bias filter:                      453  (0.0331334); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.39s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 1637.51
//
Query:       MMETSP1325-20131115|9859_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 692.86
//
Query:       MMETSP1325-20131115|9860_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 331.13
//
Query:       MMETSP1325-20131115|9862_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-12   45.7   0.0    3.3e-09   35.9   0.0    2.1  2  PF00023.25 Ankyrin repeat
    9.2e-12   45.0   0.0      1e-11   44.8   0.0    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
    1.4e-08   34.8   0.0    2.2e-08   34.2   0.0    1.4  1  PF13637.1  Ankyrin repeats (many copies)
    1.2e-07   31.6   0.0    2.2e-07   30.7   0.0    1.5  2  PF13857.1  Ankyrin repeats (many copies)
    1.8e-06   27.5   0.0    4.3e-05   23.2   0.0    2.1  2  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.023   14.1   0.3        6.9    6.2   0.0    2.3  2  PF09256.5  BAFF-R, TALL-1 binding


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00094       2.1       5      32 ..      11      38 ..      10      39 .. 0.94
   2 !   35.9   0.0   1.5e-12   3.3e-09       3      32 ..      42      71 ..      40      72 .. 0.95

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00094
                HHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  5 PLHlAalrgnlevvklLlsqGAdlnaqd 32
                P H+ a ++ l  v+  lsqG + n +d
  MMETSP1325-20131115|9862_1 11 PIHMGAACDFLPLVEHCLSQGISANSTD 38
                899*********************9988 PP

  == domain 2    score: 35.9 bits;  conditional E-value: 1.5e-12
                CBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
  PF00023.25  3 fTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                +TPLH A++rg++++v lL+  GAd+ a++
  MMETSP1325-20131115|9862_1 42 ETPLHAASRRGSKDCVDLLVRSGADVLAKN 71
                7***************************98 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   4.5e-15     1e-11      28      89 .]       9      71 ..       2      71 .. 0.94

  Alignments for each domain:
  == domain 1    score: 44.8 bits;  conditional E-value: 4.5e-15
   PF12796.2 28 t.pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89
                t p+h  a+ + l  v+  l++g + n++d+e++tpLh+A r g++++v+lL+ +gadv +++
  MMETSP1325-20131115|9862_1  9 TpPIHMGAACDFLPLVEHCLSQGISANSTDAEQETPLHAASRRGSKDCVDLLVRSGADVLAKN 71
                359*******************************************************98876 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   9.7e-12   2.2e-08      12      54 .]      18      61 ..       8      61 .. 0.88

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 9.7e-12
   PF13637.1 12 gr.lelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                ++ l+lv+++l++gi+ n td++++t+Lh A +rg ++++ lL+
  MMETSP1325-20131115|9862_1 18 CDfLPLVEHCLSQGISANSTDAEQETPLHAASRRGSKDCVDLLV 61
                44589************************************996 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.096   2.2e+02      19      47 ..      11      39 ..       5      40 .. 0.85
   2 !   30.7   0.0   9.8e-11   2.2e-07       3      47 ..      29      72 ..      28      73 .] 0.92

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.096
   PF13857.1 19 pLhlAakggalevvrlLlapgadlnlrds 47
                p+h+ a +  l++v+  l +g ++n +d+
  MMETSP1325-20131115|9862_1 11 PIHMGAACDFLPLVEHCLSQGISANSTDA 39
                78888999999999999999999988886 PP

  == domain 2    score: 30.7 bits;  conditional E-value: 9.8e-11
   PF13857.1  3 ehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrds 47
                + g +++n+td + +tpLh A ++g+ ++v+lL++ gad  +++ 
  MMETSP1325-20131115|9862_1 29 SQG-ISANSTDAEQETPLHAASRRGSKDCVDLLVRSGADVLAKNR 72
                667.999********************************999885 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.095   2.2e+02       5      28 ..      11      34 ..       8      36 .. 0.81
   2 !   23.2   0.0   1.9e-08   4.3e-05       3      29 ..      42      68 ..      40      69 .. 0.93

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.095
   PF13606.1  5 pLhlAasngrielveaLlengadi 28
                p+h+ a +  + lve++l+ g+  
  MMETSP1325-20131115|9862_1 11 PIHMGAACDFLPLVEHCLSQGISA 34
                688888888889999999998765 PP

  == domain 2    score: 23.2 bits;  conditional E-value: 1.9e-08
   PF13606.1  3 nTpLhlAasngrielveaLlengadin 29
                +TpLh A ++g+++ v++L+++gad+ 
  MMETSP1325-20131115|9862_1 42 ETPLHAASRRGSKDCVDLLVRSGADVL 68
                8************************97 PP

>> PF09256.5  BAFF-R, TALL-1 binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0041       9.4      10      19 ..      20      29 ..      15      32 .. 0.81
   2 ?    6.2   0.0     0.003       6.9       8      15 ..      55      62 ..      53      64 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0041
   PF09256.5 10 FDlLVRnCVa 19
                F +LV +C +
  MMETSP1325-20131115|9862_1 20 FLPLVEHCLS 29
                789*****98 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.003
   PF09256.5  8 ECFDlLVR 15
                 C DlLVR
  MMETSP1325-20131115|9862_1 55 DCVDLLVR 62
                6******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 323.95
//
Query:       MMETSP1325-20131115|9863_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-16   59.7   0.3    2.8e-16   59.6   0.2    1.0  1  PF00664.18 ABC transporter transmembrane region
  ------ inclusion threshold ------
      0.063   13.1   0.3       0.11   12.4   0.1    1.5  1  PF00674.13 DUP family


Domain annotation for each model (and alignments):
>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.2   4.1e-20   2.8e-16     152     275 .]       5     126 ..       1     126 [. 0.94

  Alignments for each domain:
  == domain 1    score: 59.6 bits;  conditional E-value: 4.1e-20
  PF00664.18 152 pllilvsavlakilkslqkkeqkayakagavaeEalsgirtVkafggeekeleryekaleeakkagikkaitagllfgftqlisylsyalalwfgtflsvisgelsvgtvfaflslglqlsgpl 275
                 +l ++v+ v+++ +k+lq++ +k +++++av++E+++ ir +k+ g+e+ +++++ ++++ ++   +k     g++++ ++l  ++ +a+ + f    +v+ + l++ + f++l+l+ +ls +l
  MMETSP1325-20131115|9863_1   5 LLAFPVNTVVMRYQKRLQERLMKEKDERMAVVTEVINSIRAIKLHGWEPMFEQQIAEKRN-KEIVTLKTFSQLGAVTSTLWLCAPT-MAALASFLIKSQVMGETLTPAQGFTSLTLFQLLSVSL 126
                 67799*******************************************************.*************************.888888888778*******************999775 PP

>> PF00674.13  DUP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.5e-05      0.11      17      70 ..       5      64 ..       1      75 [. 0.75

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.5e-05
  PF00674.13 17 lllvllllllvlvisfekkr.ilkkefkiqllseiitekpavkgkeWd.....tiaynmN 70
                ll++ +  +++ +++  ++r + +k+ ++  + e+i++  a+k ++W+     +ia++ N
  MMETSP1325-20131115|9863_1  5 LLAFPVNTVVMRYQKRLQERlMKEKDERMAVVTEVINSIRAIKLHGWEpmfeqQIAEKRN 64
                5666777777777777777746668899*******************7333335565555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       683  (0.0499561); expected 273.4 (0.02)
Passed bias filter:                      545  (0.0398625); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 542.33
//
Query:       MMETSP1325-20131115|9865_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-05   23.1   0.5        1.9    8.7   0.0    3.3  3  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.051   13.1   2.1       0.68    9.5   1.5    2.6  1  PF12799.2  Leucine Rich repeats (2 copies)
      0.066   12.8   0.9        1.1    8.9   0.1    2.5  3  PF13855.1  Leucine rich repeat
       0.43   10.8   3.3         50    4.6   0.1    3.5  3  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00055       1.9       3      20 ..      11      29 ..       9      31 .. 0.84
   2 ?    4.5   0.1     0.013        43       2      22 .]      33      54 ..      32      54 .. 0.92
   3 !    7.0   0.0     0.002       6.8       2      22 .]      56      78 ..      55      80 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00055
                SEEEETSS.BCB.CHHHHHH CS
  PF00560.28  3 eeLdLsgN.nlt.slppsls 20
                +  +Lsg+ +lt ++ + l+
  MMETSP1325-20131115|9865_1 11 TNMNLSGCrKLTgDIES-LK 29
                678*********99988.66 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.013
                ESEEEETSS.BCB.CHHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsnL 22
                L++L L  +  l+ ++ + l+n+
  MMETSP1325-20131115|9865_1 33 LTSLILYECrELKgDIES-LKNC 54
                899**********99*99.9987 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.002
                ESEEEETSS.BCB.CHHHHHHHH CS
  PF00560.28  2 LeeLdLsgN.nlt.slppslsnL 22
                L++L+Lsg  ++  ++  +++nL
  MMETSP1325-20131115|9865_1 56 LQVLNLSGGgRFVmQFTGNIKNL 78
                9*******888877777777665 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.5    0.0002      0.68       3      33 ..      33      63 ..      10      80 .. 0.77

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0002
   PF12799.2  3 LevLdLsnNnIkdlppelanLpn..LktLnLsn 33
                L++L L +++  +l++++ +L+n  L++LnLs+
  MMETSP1325-20131115|9865_1 33 LTSLILYECR--ELKGDIESLKNcpLQVLNLSG 63
                6667777775..4555555555555******97 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.13   4.3e+02      44      60 ..       4      19 ..       2      21 .. 0.75
   2 ?    8.9   0.1   0.00033       1.1       3      34 ..      33      63 ..      31      66 .. 0.74
   3 ?   -1.9   0.0      0.74   2.5e+03       8      18 ..      71      80 ..      68      81 .] 0.67

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.13
   PF13855.1 44 afkgLpsLreLnLsgNr 60
                +fk++ +++  nLsg+r
  MMETSP1325-20131115|9865_1  4 VFKDM-AITNMNLSGCR 19
                57777.78888888875 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00033
   PF13855.1  3 LkeLdLsnN.rlk.vipdgaFkglsnLkvLdLsg 34
                L++L+L  + +lk +   +++k+++ L+vL+Lsg
  MMETSP1325-20131115|9865_1 33 LTSLILYECrELKgD--IESLKNCP-LQVLNLSG 63
                677777777334333..469****9.******95 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 0.74
   PF13855.1  8 LsnNrlkvipd 18
                 ++N +k++p+
  MMETSP1325-20131115|9865_1 71 FTGN-IKNLPQ 80
                5677.887776 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.015        50       4      14 ..      11      22 ..       9      36 .. 0.82
   2 ?    2.9   0.2     0.054   1.8e+02       3      14 ..      33      45 ..      32      60 .. 0.68
   3 ?    2.7   0.1     0.062   2.1e+02       3      10 ..      56      63 ..      54      79 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.015
   PF13504.1  4 keLdLsgnr.Lt 14
                ++ +Lsg+r Lt
  MMETSP1325-20131115|9865_1 11 TNMNLSGCRkLT 22
                56789***9887 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.054
   PF13504.1  3 LkeLdLsgnr.Lt 14
                L+ L L  +r L+
  MMETSP1325-20131115|9865_1 33 LTSLILYECReLK 45
                6777787776554 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.062
   PF13504.1  3 LkeLdLsg 10
                L++L+Lsg
  MMETSP1325-20131115|9865_1 56 LQVLNLSG 63
                899***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 388.21
//
Query:       MMETSP1325-20131115|9866_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-13   49.2  41.1      2e-07   30.8   7.9    4.0  4  PF07974.8  EGF-like domain
     0.0066   16.3   2.9     0.0066   16.3   2.0    4.6  5  PF12661.2  Human growth factor-like EGF
  ------ inclusion threshold ------
      0.013   15.3  34.4       0.11   12.3   5.6    3.5  2  PF00053.19 Laminin EGF-like (Domains III and V)
        1.2    9.0  33.4      0.085   12.7   5.3    4.4  4  PF00008.22 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   7.9     6e-11     2e-07       1      32 []      16      44 ..      16      44 .. 0.94
   2 !   20.3   3.8   1.2e-07   0.00041       7      32 .]      70      96 ..      65      96 .. 0.92
   3 ?   -0.9   0.4       0.5   1.7e+03       1      14 [.     101     111 ..     100     113 .. 0.65
   4 !   15.1   1.1   5.1e-06     0.017      21      32 .]     143     154 ..     138     154 .. 0.95

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 6e-11
   PF07974.8  1 CsadgliCgghGtCvkqcgkCvCdsgyqGktC 32
                C+  + +C++hG+C ++ g+C+C+ g++G++C
  MMETSP1325-20131115|9866_1 16 CP--N-LCNAHGQCSDPDGVCDCYEGWTGADC 44
                88..3.6************************* PP

  == domain 2    score: 20.3 bits;  conditional E-value: 1.2e-07
   PF07974.8  7 iCgghGtCvkqcgkCvCdsg.yqGktC 32
                +C+++G C++ +g+C+C++  + G+ C
  MMETSP1325-20131115|9866_1 70 ECSNRGLCNRGTGVCSCEDDrFEGAAC 96
                5********88***************9 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.5
   PF07974.8   1 CsadgliCgghGtC 14 
                 C +   +C   G C
  MMETSP1325-20131115|9866_1 101 CAS---DCLTVGRC 111
                 654...37777777 PP

  == domain 4    score: 15.1 bits;  conditional E-value: 5.1e-06
   PF07974.8  21 CvCdsgyqGktC 32 
                 CvCd+gy+G++C
  MMETSP1325-20131115|9866_1 143 CVCDDGYFGPDC 154
                 ************ PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   2.0   1.9e-06    0.0066       1      13 []      32      44 ..      32      44 .. 0.96
   2 ?   -1.0   0.0      0.66   2.2e+03       3       7 ..      48      52 ..      48      52 .. 0.84
   3 ?   -0.9   0.3       0.6   2.1e+03       1       4 [.      83      86 ..      83      88 .. 0.78
   4 ?   -2.2   0.0       1.6   5.3e+03       8      13 .]      91      96 ..      91      96 .. 0.87
   5 !   11.6   3.6   6.1e-05      0.21       2      13 .]     143     154 ..     142     154 .. 0.99

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.9e-06
   PF12661.2  1 kCqCppGyTGdnC 13
                +C C  G+TG++C
  MMETSP1325-20131115|9866_1 32 VCDCYEGWTGADC 44
                6************ PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.66
   PF12661.2  3 qCppG 7 
                +Cp G
  MMETSP1325-20131115|9866_1 48 ICPYG 52
                6**88 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 0.6
   PF12661.2  1 kCqC 4 
                +C C
  MMETSP1325-20131115|9866_1 83 VCSC 86
                5999 PP

  == domain 4    score: -2.2 bits;  conditional E-value: 1.6
   PF12661.2  8 yTGdnC 13
                ++G+ C
  MMETSP1325-20131115|9866_1 91 FEGAAC 96
                899999 PP

  == domain 5    score: 11.6 bits;  conditional E-value: 6.1e-05
   PF12661.2   2 CqCppGyTGdnC 13 
                 C+C+ Gy G++C
  MMETSP1325-20131115|9866_1 143 CVCDDGYFGPDC 154
                 ************ PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   5.6   3.1e-05      0.11       3      32 ..      20      45 ..      15      52 .. 0.84
   2 ?   -0.4  12.7      0.29     1e+03       3      33 ..      71      98 ..      68     156 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.1e-05
                STT-B-CC--B-S----BSBSTTEE---S- CS
  PF00053.19  3 CnphgsssssCdsstgqClCkenveGrkCd 32
                Cn hg    +C   +g+C+C e+ +G +C 
  MMETSP1325-20131115|9866_1 20 CNAHG----QCSDPDGVCDCYEGWTGADCS 45
                55555....********************6 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.29
                STT-B-CC--B-S----BSBST.TEE---S-E CS
  PF00053.19  3 CnphgsssssCdsstgqClCke.nveGrkCdr 33
                C+++g     C++ tg+C+C++  +eG  C+r
  MMETSP1325-20131115|9866_1 71 CSNRG----LCNRGTGVCSCEDdRFEGAACER 98
                66666....9**********86279*****97 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   5.3   2.5e-05     0.085       3      31 ..      17      42 ..      16      43 .. 0.92
   2 ?    5.9   3.6    0.0033        11       5      25 ..      70      87 ..      66      97 .. 0.78
   3 ?   -0.5   0.3      0.33   1.1e+03       1      14 [.     101     113 ..      96     117 .. 0.62
   4 ?    4.1   0.5     0.012        40      20      31 ..     141     152 ..     139     153 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.5e-05
                TTTCSS--EEEEECCTEEEEE--TTCTTT CS
  PF00008.22  3 pnpCsngGtCvdtpgggytCeCpeGytGk 31
                pn C+ +G+C d +     C+C eG+tG 
  MMETSP1325-20131115|9866_1 17 PNLCNAHGQCSDPD---GVCDCYEGWTGA 42
                678**********8...**********96 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0033
                TCSS--EEEEECCTEEEEE-- CS
  PF00008.22  5 pCsngGtCvdtpgggytCeCp 25
                 Csn+G C+++      C C 
  MMETSP1325-20131115|9866_1 70 ECSNRGLCNRGT---GVCSCE 87
                8********996...777776 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.33
                 TTTTTCSS--EEEE CS
  PF00008.22   1 CspnpCsngGtCvd 14 
                 C++  C+  G+C++
  MMETSP1325-20131115|9866_1 101 CAS-DCLTVGRCLS 113
                 333.5555577765 PP

  == domain 4    score: 4.1 bits;  conditional E-value: 0.012
                 EEEE--TTCTTT CS
  PF00008.22  20 ytCeCpeGytGk 31 
                 y C C  Gy G+
  MMETSP1325-20131115|9866_1 141 YGCVCDDGYFGP 152
                 66********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 777.59
//
Query:       MMETSP1325-20131115|9867_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.33    8.6  13.8       0.36    8.5   9.6    1.0  1  PF05642.6 Sporozoite P67 surface antigen
       0.79    7.5  11.6       0.83    7.4   8.1    1.0  1  PF06933.6 Special lobe-specific silk protein SSP160
        3.4    6.7   5.6        3.3    6.7   3.9    1.0  1  PF11593.3 Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   9.6     8e-05      0.36     272     320 ..       2      50 ..       1      54 [. 0.90

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 8e-05
   PF05642.6 272 aatssssttspssstttttpassgpsaqgshgsssrnavtrstdsisgp 320
                 ++ts+s++ts+++ ++t+t++s++p a+g + sss  a+++s + i g 
  MMETSP1325-20131115|9867_1   2 TSTSASASTSTAADASTATTTSASPMARGRPSSSSGHAISKSMELIGGV 50 
                 589999999999999*************************999888775 PP

>> PF06933.6  Special lobe-specific silk protein SSP160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   8.1   0.00018      0.83     284     330 ..       2      48 ..       1      55 [. 0.83

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00018
   PF06933.6 284 nstssststststttststtttnsttstnstsssnsstiagsidiaa 330
                  sts+s+stst++ +st+ttt+ s  +    sss   +i+ s+++  
  MMETSP1325-20131115|9867_1   2 TSTSASASTSTAADASTATTTSASPMARGRPSSSSGHAISKSMELIG 48 
                 68999999999999999999999999999999999999999988755 PP

>> PF11593.3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   3.9   0.00072       3.3     167     201 ..       2      36 ..       1      50 [. 0.74

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.00072
   PF11593.3 167 tagvGsaattaaisattattptttakkprkprqtk 201
                 t++  sa+t++a +a+tatt+ +++   ++p ++ 
  MMETSP1325-20131115|9867_1   2 TSTSASASTSTAADASTATTTSASPMARGRPSSSS 36 
                 55666778888888888888888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       448  (0.0327677); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|9868_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 522.41
//
Query:       MMETSP1325-20131115|9869_1  [L=294]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-49  168.3   0.0    1.9e-49  167.9   0.0    1.1  1  PF08125.8 Mannitol dehydrogenase C-terminal domain


Domain annotation for each model (and alignments):
>> PF08125.8  Mannitol dehydrogenase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.9   0.0   1.4e-53   1.9e-49      43     210 ..       1     168 [.       1     186 [. 0.96

  Alignments for each domain:
  == domain 1    score: 167.9 bits;  conditional E-value: 1.4e-53
                 EEEEE------.---GGG---EEES--HHHHHHH-------HHHHH---------BHHHHHTSHHHHHHHHHHHHHTTGGG--------HHHHHHHHHHHHT-STT--BHHHHH-----SHHHHTHHHHHHHHH-----HHHHHHHHHHHHHT-------------STT CS
   PF08125.8  43 ewviednfvkg.rpalekvgvefvddvkpYeerKlrllNggHavlaylGylaglktvheamkdkeirafvekllqeevapllkkvpendlesYakkiieRFsNpyikdtvtrvardGssklPkrklpslerliaagplpkllallvaalirllegvaeagkakeeeDpe 210
                 +wv+ed+fv+g rp+lekvgv +v+dv+pYe +KlrllN+gH++l+y++yl g+++v+ am+d+ ++a+++++ +e    l +  p++d+++Y++++i+RFsNpyikdtv+r+a dGs kl + + +   +++++g++++++ + va +ir+l g +e+g ++e++Dp 
  MMETSP1325-20131115|9869_1   1 QWVVEDQFVDGiRPDLEKVGVLVVPDVHPYELMKLRLLNAGHSALSYVSYLCGHRFVDAAMNDPLVVAYLNGVFDEHTSTLSPV-PGVDIPEYIATLIARFSNPYIKDTVQRLAEDGSMKLVTTMRDPAVENLKSGKSTAMFSFTVATWIRYLVGKDESGAVIEIKDPA 168
                 8********9769*************************************************************9998877766.**********************************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.63
# Mc/sec: 1118.30
//
Query:       MMETSP1325-20131115|9872_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|9871_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00013   22.0   0.0     0.0002   21.4   0.0    1.2  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   1.4e-08    0.0002      16     102 ..       8      91 ..       4      93 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 1.4e-08
                 CEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
  PF00169.24  16 twkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                 t ++r+f  ++  L y+k++k  + +a     ++ d+ v + ++        +  +f i+ +++ +y+l+a + +e+k+Wv+ l +l
  MMETSP1325-20131115|9871_1   8 TVRRRWFETNGVFLTYYKNKKMSKLLAAVNLPQVGDIAVMEPDAEN--DDTVDGGCFSIQLNSR-EYILKAADHDEAKAWVKVLTKL 91 
                 6689999999999********9999999999999999555555542..2677889*********.*****************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 824.35
//
Query:       MMETSP1325-20131115|9870_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 1253.10
//
Query:       MMETSP1325-20131115|9873_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1803  (0.131875); expected 273.4 (0.02)
Passed bias filter:                      855  (0.0625366); expected 273.4 (0.02)
Passed Vit filter:                       155  (0.011337); expected 13.7 (0.001)
Passed Fwd filter:                        23  (0.00168227); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.49s 00:00:00.93 Elapsed: 00:00:00.62
# Mc/sec: 270.56
//
Query:       MMETSP1325-20131115|9874_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.1   3.5       0.16   11.7   2.4    1.2  1  PF14012.1 Protein of unknown function (DUF4229)


Domain annotation for each model (and alignments):
>> PF14012.1  Protein of unknown function (DUF4229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.4   1.2e-05      0.16      13      65 ..      12      61 ..       4      63 .] 0.67

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.2e-05
   PF14012.1 13 vvllavlvllgvlialavplllaallAlvvslplSflllrklRrrasaalaer 65
                +v++ +l++ ++ + +   +l   +  l+v+ +lS++ +r  Rr+  +  a++
  MMETSP1325-20131115|9874_1 12 LVVTTLLYVGSLPVDI---ILSFCAKSLLVASVLSVVSFRYERRKTRQVAAAA 61
                3444444544444441...24445669****************9988877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 279.57
//
Query:       MMETSP1325-20131115|9875_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 596.43
//
Query:       MMETSP1325-20131115|9876_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.33s 00:00:00.62 Elapsed: 00:00:00.54
# Mc/sec: 181.95
//
Query:       MMETSP1325-20131115|9878_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.31   10.4  14.0       0.34   10.3   9.7    1.0  1  PF05764.8  YL1 nuclear protein
          3    7.3   8.1        3.3    7.1   5.6    1.1  1  PF12238.3  Merozoite surface antigen 2c
        7.2    5.8   7.5        8.5    5.5   5.2    1.0  1  PF01577.11 Potyvirus P1 protease
        7.5    5.7   9.6        8.5    5.5   6.7    1.0  1  PF04086.8  Signal recognition particle, alpha subunit, N-terminal
          8    5.9   6.1        9.7    5.6   4.2    1.3  1  PF04386.8  Stringent starvation protein B


Domain annotation for each model (and alignments):
>> PF05764.8  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   9.7   0.00013      0.34      77     149 ..       5      70 ..       1      74 [. 0.46

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00013
   PF05764.8  77 eeegekelekeekekkkkrkkkkaykeplkkkkkkkkkaakkkkaaaeekkkkkerkseaetlldkkrRkSsR 149
                 e e+e e e ee   kkk  kkka++     kkk+ +k+++++k+++++ k  ++   +a t  +k +R+SsR
  MMETSP1325-20131115|9878_1   5 EAEAEAEAEAEEAVPKKKAPKKKATP-----KKKASPKPKAAPKKKSPASK--SKSLPKAVTNPTKGTRQSSR 70 
                 55666666666666666633333333.....33333222223333333333..33334444444444777777 PP

>> PF12238.3  Merozoite surface antigen 2c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   5.6    0.0012       3.3     136     200 ..      21      84 .]       7      84 .] 0.53

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0012
   PF12238.3 136 kkapaeeyskkasssqgtsetrPsegsatp.ntsaaktpanp..aaqpekpaetpkgnlksgsSFtfG 200
                 kkap+++  +k+++s  +++++P ++s +  ++s +k   np  ++++++  ++p g    gsS t G
  MMETSP1325-20131115|9878_1  21 KKAPKKKATPKKKASP-KPKAAPKKKSPASkSKSLPKAVTNPtkGTRQSSRIRKPLGG---GSSLTLG 84 
                 5566666666555444.56666655554430233333333334444555555555544...*****98 PP

>> PF01577.11  Potyvirus P1 protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   5.2    0.0031       8.5      40     105 ..       8      73 ..       2      76 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0031
  PF01577.11  40 krekekreeeeerqflqlaaasivskitpkttekvsktesvsfrtklkkrttkkmkkkkkkkkvkm 105
                  ++ ++ ee+  +++   + a++++k +pk++++++k +  s+++ l+k+ t  +k  ++ +++++
  MMETSP1325-20131115|9878_1   8 AEAEAEAEEAVPKKKAPKKKATPKKKASPKPKAAPKKKSPASKSKSLPKAVTNPTKGTRQSSRIRK 73 
                 334445555555668999999999999999999999999999999999999999999998888886 PP

>> PF04086.8  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   6.7    0.0031       8.5      98     176 ..       7      57 ..       2      79 .. 0.31

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0031
   PF04086.8  98 elEkeskkqakspkamkkfeeskkskktvksmierkpkekglekekkkkkeqeskkskeskassspkksrpstps..llka 176
                 e+E+e+++++  pk+++++++   +k                              +++ k+++ pkk++p+++s  l ka
  MMETSP1325-20131115|9878_1   7 EAEAEAEAEEAVPKKKAPKKKATPKK------------------------------KASPKPKAAPKKKSPASKSksLPKA 57 
                 33333333333333333322222222..............................2222222222222222222111111 PP

>> PF04386.8  Stringent starvation protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   4.2    0.0036       9.7     113     146 ..       7      45 ..       2      71 .. 0.51

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0036
                 --XXXX................XXXXXXXXXXXXXXXXX CS
   PF04386.8 113 eeaeeeeeeee.....eeeekakeeeaeeakpeeeekek 146
                 e+++e+e+ee+     ++++ka++++++++kp++++k+k
  MMETSP1325-20131115|9878_1   7 EAEAEAEAEEAvpkkkAPKKKATPKKKASPKPKAAPKKK 45 
                 222222222224444322233333333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       671  (0.0490784); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.42s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|9882_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00049   19.8   0.2       0.02   14.8   0.0    2.6  3  PF02985.17 HEAT repeat
     0.0027   18.1   0.0       0.01   16.2   0.0    1.9  2  PF13513.1  HEAT-like repeat
  ------ inclusion threshold ------
      0.013   15.6   0.0       0.02   15.0   0.0    1.4  1  PF13646.1  HEAT repeats
      0.068   12.7   0.0      0.079   12.5   0.0    1.1  1  PF11701.3  Myosin-binding striated muscle assembly central


Domain annotation for each model (and alignments):
>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.072   2.5e+02      18      30 ..      18      30 ..      13      31 .. 0.88
   2 !   14.8   0.0   5.7e-06      0.02       2      29 ..      40      67 ..      39      68 .. 0.89
   3 ?   -2.7   0.0       2.4   8.2e+03       3      13 ..      85      95 ..      84      96 .. 0.68

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.072
                HHHHHHHHHHHHC CS
  PF02985.17 18 eaAaeaLgalaev 30
                +aAa +L ++a+ 
  MMETSP1325-20131115|9882_1 18 SAAAVCLENIAKT 30
                59********985 PP

  == domain 2    score: 14.8 bits;  conditional E-value: 5.7e-06
                HHHHHHHHTSSSHHHHHHHHHHHHHHHH CS
  PF02985.17  2 lPlllkllnDpspeVReaAaeaLgalae 29
                +P++ +++  p+++ ReaA+ a+g +++
  MMETSP1325-20131115|9882_1 40 FPFVSQNIDQPDWRLREAATMAFGMILD 67
                7999999999**************9975 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 2.4
                HHHHHHHTSSS CS
  PF02985.17  3 PlllkllnDps 13
                P ++   +Dps
  MMETSP1325-20131115|9882_1 85 PQFVAKVQDPS 95
                67777777876 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.73   2.5e+03      46      55 .]      18      27 ..       5      34 .. 0.67
   2 !   16.2   0.0     3e-06      0.01       1      40 [.      52      94 ..      52      96 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.73
   PF13513.1 46 eaAawALgrl 55
                 aAa +L+++
  MMETSP1325-20131115|9882_1 18 SAAAVCLENI 27
                4566666554 PP

  == domain 2    score: 16.2 bits;  conditional E-value: 3e-06
   PF13513.1  1 wrvRraAawaLGr...laggeprllepavpellpaLlelLedd 40
                wr+R+aA +a+G     ++ e  + + +v++++p++++  +d+
  MMETSP1325-20131115|9882_1 52 WRLREAATMAFGMildGPQDESGQFKALVKQAVPQFVAKVQDP 94
                9************97766666777888********99887665 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   5.8e-06      0.02      19      69 ..      19      81 ..       4      96 .. 0.65

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5.8e-06
   PF13646.1 19 aaieaLgqlgse.......ealpaLlelLkdsdpevRraAaeaLgkl........gdpealpaLlk 69
                aa+ +L +++          + p + + ++ +d+++R+aA +a g +        g     +aL+k
  MMETSP1325-20131115|9882_1 19 AAAVCLENIAKTvgdditnHVFPFVSQNIDQPDWRLREAATMAFGMIldgpqdesG---QFKALVK 81
                55555554444433334446799999999****************99775432221...2333333 PP

>> PF11701.3  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.3e-05     0.079      20      80 ..      15      75 ..      10      94 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHTTTTHHHHHH CS
   PF11701.3 20 evrslalvilsklldaekenfkeaieeyieslideeemdslinavsvlsalfpippdvgaq 80
                ++ s a+v+l  + ++ ++++++ +  ++++ id+++      a+ +  +++ +p+d + q
  MMETSP1325-20131115|9882_1 15 NLASAAAVCLENIAKTVGDDITNHVFPFVSQNIDQPDWRLREAATMAFGMILDGPQDESGQ 75
                56789**************************************************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 412.01
//
Query:       MMETSP1325-20131115|9883_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.5   1.6       0.23   11.0   1.1    1.2  1  PF11636.3 Troponin I residues 1-32


Domain annotation for each model (and alignments):
>> PF11636.3  Troponin I residues 1-32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.1   1.7e-05      0.23       2      24 ..      33      55 ..      32      57 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 1.7e-05
   PF11636.3  2 aeeeevvpepPkPpPvvaPPllR 24
                + eee v+ep +Pp  va P lR
  MMETSP1325-20131115|9883_1 33 EHEEERVDEPQAPPDEVAHPWLR 55
                668889**************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.61
# Mc/sec: 306.42
//
Query:       MMETSP1325-20131115|9881_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-10   39.7   0.0    9.8e-10   38.8   0.0    1.4  1  PF12847.2  Methyltransferase domain
    1.5e-09   37.5   0.0    1.9e-09   37.1   0.0    1.2  1  PF13847.1  Methyltransferase domain
    5.8e-08   32.6   0.1    8.7e-08   32.0   0.1    1.4  1  PF13659.1  Methyltransferase domain
    2.1e-07   30.3   0.0    2.8e-07   29.9   0.0    1.2  1  PF05175.9  Methyltransferase small domain
    1.5e-06   28.4   0.0    2.6e-06   27.7   0.0    1.4  1  PF08241.7  Methyltransferase domain
    3.7e-06   26.5   0.0    5.7e-06   25.9   0.0    1.2  1  PF01170.13 Putative RNA methylase family UPF0020
    8.2e-06   25.9   0.0    1.8e-05   24.9   0.0    1.6  1  PF13649.1  Methyltransferase domain
    2.2e-05   23.5   0.0    3.3e-05   23.0   0.0    1.2  1  PF06325.8  Ribosomal protein L11 methyltransferase (PrmA)
    0.00013   21.5   0.0    0.00016   21.2   0.0    1.3  1  PF13489.1  Methyltransferase domain
      0.003   17.8   0.0     0.0051   17.1   0.0    1.4  1  PF08242.7  Methyltransferase domain
     0.0037   16.1   0.0     0.0051   15.7   0.0    1.2  1  PF00398.15 Ribosomal RNA adenine dimethylase
  ------ inclusion threshold ------
      0.051   12.7   0.0       0.59    9.2   0.0    2.0  1  PF08123.8  Histone methylation protein DOT1
      0.079   11.9   0.0       0.11   11.3   0.0    1.2  1  PF02353.15 Mycolic acid cyclopropane synthetase
       0.11   11.3   0.0       0.14   11.0   0.0    1.2  1  PF02390.12 Putative methyltransferase


Domain annotation for each model (and alignments):
>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0     1e-12   9.8e-10       5      76 ..      72     139 ..      68     167 .. 0.78

  Alignments for each domain:
  == domain 1    score: 38.8 bits;  conditional E-value: 1e-12
   PF12847.2   5 ilDlGcGtGslslelarlrpgakvvgvDpseeslelarenaksldleeriellqgdakeelsllerfDavll 76 
                 + DlGcG G +sle ar ++ga+ +g+D++e  l+ ar  a+++dl++ +e+++ d+  el++  ++  vl+
  MMETSP1325-20131115|9881_1  72 VYDLGCGDGAISLEVAR-TCGARCIGFDIDEVHLASARTTAEAHDLSSLLEYRNDDV-LELEF--APATVLV 139
                 78***************.7**********************99**************.44444..4444444 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0     2e-12   1.9e-09       7     112 ..      72     169 ..      67     218 .. 0.80

  Alignments for each domain:
  == domain 1    score: 37.1 bits;  conditional E-value: 2e-12
   PF13847.1   7 vlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfe.nveFiqgdieeleklleesfDlvisnevlnaladpqkvlkeiervlkpggrlivesps 112
                 v+DlGCG G+++le a + + ga+ +G+Di+e  +++A++ a+ + +   +e+++ d+ ele  ++ +  +++ +    +++++ +vl   +r l+ g+r+i  ++ 
  MMETSP1325-20131115|9881_1  72 VYDLGCGDGAISLEVA-RTC-GARCIGFDIDEVHLASARTTAEAHDLSsLLEYRNDDVLELE--FA-PATVLVIF----LVPNMLAVLAPKFRQLRAGTRIISYHFP 169
                 89**************.444.89*************************999***********..86.34444443....5777777777777778878777776666 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.1     9e-11   8.7e-08       2      80 ..      70     146 ..      69     192 .. 0.87

  Alignments for each domain:
  == domain 1    score: 32.0 bits;  conditional E-value: 9e-11
   PF13659.1   2 drvldpgcGsGtfllaalellaalllgvEldpraaalaarnlaraglaervrvrqgdlrdlaellragsfdlvvtnpPy 80 
                 d v d+gcG G + l +++   a+ +g+++d+  +a a+++++ ++l++ ++ r+ d+++l+  + ++ + +++  p  
  MMETSP1325-20131115|9881_1  70 DLVYDLGCGDGAISLEVARTCGARCIGFDIDEVHLASARTTAEAHDLSSLLEYRNDDVLELE--FAPATVLVIFLVPNM 146
                 5799****************99***************************************9..877777777665544 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   2.9e-10   2.8e-07      24      92 ..      61     129 ..      54     164 .. 0.84

  Alignments for each domain:
  == domain 1    score: 29.9 bits;  conditional E-value: 2.9e-10
                 HHHS-TT------B-------HHHHHHHH-TT----EEESBHHHHHHHHHHHHH----..--EEE-STTT CS
   PF05175.9  24 letlpkklagkvlDlGcGaGvlgaalakespelevtlvDinarAvesakanleanklen.vevlasdlle 92 
                 l+    ++a+ v DlGcG G +++++a+ +   +   +Di++  ++sa++++ea++l++ +e++  d+le
  MMETSP1325-20131115|9881_1  61 LRLAAPAEADLVYDLGCGDGAISLEVARTCGA-RCIGFDIDEVHLASARTTAEAHDLSSlLEYRNDDVLE 129
                 4444444666799***************9998.78899*********************99***999987 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   2.6e-09   2.6e-06       2      66 ..      74     142 ..      73     160 .. 0.93

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 2.6e-09
   PF08241.7   2 dvGcGtglllealaerpaarvtgvDlseemlatakerlkeegle....lvvadaeelpfednsfDvvvs 66 
                 d+GcG g+++  +a+  +ar++g+D++e  la a++ +++++l+    +++ d+ el f+ +++ v+++
  MMETSP1325-20131115|9881_1  74 DLGCGDGAISLEVARTCGARCIGFDIDEVHLASARTTAEAHDLSslleYRNDDVLELEFAPATVLVIFL 142
                 9******************************************9****************999877765 PP

>> PF01170.13  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   5.9e-09   5.7e-06      18     107 ..      58     137 ..      55     145 .. 0.89

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 5.9e-09
  PF01170.13  18 aalvnlagvkegdpllDPmcGsGtilIEaa.llgakiapllkaeelklyglDidervvqgakeNaeeagvgdkiefvkadaaklellegev 107
                  a+++la   e d ++D  cG G+i +E a + ga+++           g+Dide ++  a++ ae+  ++ + e+++ d+ +le++ ++v
  MMETSP1325-20131115|9881_1  58 EAMLRLAAPAEADLVYDLGCGDGAISLEVArTCGARCI-----------GFDIDEVHLASARTTAEAHDLSSLLEYRNDDVLELEFAPATV 137
                 59**************************9935677777...........********************************9999666555 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   1.8e-08   1.8e-05       1      83 [.      72     152 ..      72     165 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 1.8e-08
   PF13649.1   1 ildlGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskgl..kvkfvqadaralpfeegefdlvvcaglslehlsp 83 
                 + dlGCG G    + +r +  g  +r+ig Di+e  l+ a++++++++l    ++ ++d+ +l+f+ +++ +++++ + l+ l p
  MMETSP1325-20131115|9881_1  72 VYDLGCGDGAISLEVARTC--G--ARCIGFDIDEVHLASARTTAEAHDLssLLEYRNDDVLELEFAPATVLVIFLVPNMLAVLAP 152
                 67**************998..7..9*******************99888889999************999999997666666665 PP

>> PF06325.8  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   3.4e-08   3.3e-05     162     247 ..      69     156 ..      52     165 .. 0.81

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 3.4e-08
   PF06325.8 162 geevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveaklevallkelpk...ekadvivaNILaevlieLaedike 247
                  + v D+G+G G +++ +a+   ++ ++ DiDev + +a+  ae  ++++ le + ++++++   ++a v+v   + ++l  La+++ +
  MMETSP1325-20131115|9881_1  69 ADLVYDLGCGDGAISLEVARTCGARCIGFDIDEVHLASARTTAEAHDLSSLLE-YRNDDVLElefAPATVLVIFLVPNMLAVLAPKFRQ 156
                 45789*******************************************99997.56677766667888898888888888888888765 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.7e-07   0.00016      13      56 ..      60     103 ..      30     165 .. 0.81

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.7e-07
   PF13489.1  13 lerllarlkpggrvLDiGcGtG.illellaengfdvtgvDpspaa 56 
                   rl+a  ++   v D+GcG+G i le+ +++g++++g+D++++ 
  MMETSP1325-20131115|9881_1  60 MLRLAA-PAEADLVYDLGCGDGaISLEVARTCGARCIGFDIDEVH 103
                 344554.46667899*******7777788************7653 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   5.2e-06    0.0051       2      64 ..      74     133 ..      73     162 .. 0.70

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 5.2e-06
   PF08242.7   2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg 64 
                 ++GcG+G+++ ++++   +++ +g Di++  ++ a+    +++    + +++++ d+l+l+  
  MMETSP1325-20131115|9881_1  74 DLGCGDGAISLEVART-CGARCIGFDIDEVHLASARTTAEAHD--LSSLLEYRNDDVLELEFA 133
                 89***********999.9**************55555555555..556777777777666554 PP

>> PF00398.15  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   5.2e-06    0.0051      20      92 ..      58     134 ..      49     152 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 5.2e-06
  PF00398.15  20 neIldklnlqekdtvlEigpGkGalTeeLakra.kqvvalEidsklvkrlqkkla...kdenvevvhqDflkfstpe 92 
                 +  l+ + + e d v+++g G+Ga++ e+a+ +  +   ++id+  ++  +++ +    ++ +e  ++D+l+ ++  
  MMETSP1325-20131115|9881_1  58 EAMLRLAAPAEADLVYDLGCGDGAISLEVARTCgARCIGFDIDEVHLASARTTAEahdLSSLLEYRNDDVLELEFAP 134
                 5567788899***********************999********999888887776556666777888999888876 PP

>> PF08123.8  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0    0.0006      0.59      41      85 ..      67     110 ..      52     188 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0006
                 ----EEEEE------HHHHHHHH----EEE--B--HHHHHHHHHH CS
   PF08123.8  41 kkedvFvDLGSGvGnvvlqaalevgcklsvGvEimdnaselaekq 85 
                  + d+ +DLG G G + l +a  +g + ++G +i +   + a++ 
  MMETSP1325-20131115|9881_1  67 AEADLVYDLGCGDGAISLEVARTCGAR-CIGFDIDEVHLASARTT 110
                 5678999******************99.99999877644444333 PP

>> PF02353.15  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012      0.11      63     113 ..      69     119 ..      55     135 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00012
                 --EEEE-------HHHHHHHHH--EEE--BS-HHHHHHHHHHHHCS-SSS- CS
  PF02353.15  63 GmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakqrvdeldlerk 113
                  + + d+GcG G++  + ++  +++ +g  + + + + a+ + ++ dl+  
  MMETSP1325-20131115|9881_1  69 ADLVYDLGCGDGAISLEVARTCGARCIGFDIDEVHLASARTTAEAHDLSSL 119
                 56789***********************************99999998765 PP

>> PF02390.12  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00015      0.14      18      94 ..      67     140 ..      16     144 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00015
                 GGB-EEEE--------HHHHHHH-TTSEEE---S-HHHHHHHHHHHHHH--TTB------HHHHHHHHS----BSEE CS
  PF02390.12  18 neqklvleIGfGsGdflvalAkknPdklflGiEirqkvvekvlkkiealglkNlrilegdaekvleslfadnsleki 94 
                  e+ lv ++G+G G + +++A       ++G +i +  ++ +  ++ea++l+ l  le  +++vle  fa+ ++  i
  MMETSP1325-20131115|9881_1  67 AEADLVYDLGCGDGAISLEVART-CGARCIGFDIDEVHLASARTTAEAHDLSSL--LEYRNDDVLELEFAPATVLVI 140
                 344599**************976.6789*********************99554..444466677666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.72
# Mc/sec: 748.86
//
Query:       MMETSP1325-20131115|9885_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 342.93
//
Query:       MMETSP1325-20131115|9884_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-09   36.1   0.0    3.9e-09   35.7   0.0    1.1  1  PF03588.9 Leucyl/phenylalanyl-tRNA protein transferase


Domain annotation for each model (and alignments):
>> PF03588.9  Leucyl/phenylalanyl-tRNA protein transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   2.8e-13   3.9e-09       5     100 ..      66     162 ..      62     165 .. 0.85

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 2.8e-13
   PF03588.9   5 llkaYkngvfpwask....delllwvspdpravlv.pdelhiskslkktlrksrfevkidkaFeaviegcaekrrnqdetwiteelkeaylklheagyaHS 100
                 +  + ++g  p+a++       +l++ +++r++l  +d+++i+   +k  +   f+v+++k+F+ v+eg  e++   d+ w   +l +ay+ ++ + ++ S
  MMETSP1325-20131115|9884_1  66 IADLMRHGFLPMAHQvadgMYVMLPKLHQRRCCLRqLDSIKIQNGTRKRAK--GFHVTLNKCFDGVVEGLHEQH--GDSCWFYPPLVKAYKMIFDQPHLYS 162
                 556677888888887753234578899*******6379**********999..******************999..89*************9999887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 763.28
//
Query:       MMETSP1325-20131115|9886_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.004   17.4   0.0     0.0052   17.0   0.0    1.1  1  PF13426.1 PAS domain
  ------ inclusion threshold ------
       0.22   11.0   1.3        1.4    8.5   0.4    2.4  3  PF06394.8 Pepsin inhibitor-3-like repeated domain


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   7.6e-07    0.0052       4      59 ..      42      97 ..      40     112 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 7.6e-07
   PF13426.1  4 ilildpdgtilfaNeaalrllGytreevlgksirdlfpededeeavalleraleag 59
                + i+ +dg +++ N+ + +++ y+++e+l  +i +l ++++ +++++++  +l++ 
  MMETSP1325-20131115|9886_1 42 MAIATMDGCFVDGNKRFVEVTSYSKAELLKLTIFNLTAPHDLQDTFSRVSLMLRST 97
                78999***********************************9999998876666633 PP

>> PF06394.8  Pepsin inhibitor-3-like repeated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.31   2.1e+03      17      24 ..      33      40 ..      26      41 .. 0.79
   2 ?    8.5   0.4    0.0002       1.4      18      35 ..      45      62 ..      38      69 .. 0.84
   3 ?   -0.5   0.0      0.13     9e+02       6      16 ..     100     110 ..      96     113 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.31
   PF06394.8 17 qggfdGCv 24
                + +fdGC+
  MMETSP1325-20131115|9886_1 33 LAFFDGCI 40
                5689***5 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.0002
   PF06394.8 18 ggfdGCvVqgnklyvngf 35
                   dGC V gnk +v+ +
  MMETSP1325-20131115|9886_1 45 ATMDGCFVDGNKRFVEVT 62
                5789**********9865 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.13
   PF06394.8   6 kpsfctiedtg 16 
                  p+fct ++++
  MMETSP1325-20131115|9886_1 100 APRFCTGAVMK 110
                 599***99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|9887_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 355.17
//
Query:       MMETSP1325-20131115|9889_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-08   32.2   1.3      1e-07   31.4   0.9    1.4  1  PF00003.17 7 transmembrane sweet-taste receptor of 3 GCPR


Domain annotation for each model (and alignments):
>> PF00003.17  7 transmembrane sweet-taste receptor of 3 GCPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.9   7.6e-12     1e-07       4      78 ..     130     222 .]     124     222 .] 0.77

  Alignments for each domain:
  == domain 1    score: 31.4 bits;  conditional E-value: 7.6e-12
  PF00003.17   4 la.tvlvvvvfvryrntplvkassrelsfllLlglllcflstflflgept..................dalCalrrfllglgfalcfsallvkt 78 
                 ++  + +++ ++  ++  +++as++ +++l+L+g ll+ l++f flg+ +                  d++C++  +l  +gf l+f++l++kt
  MMETSP1325-20131115|9889_1 130 VVlCAGIFMWIIIAKENIVIRASQPFFLMLVLCGSLLSILAIF-FLGNDDngidpevdsdgneswpslDFSCMVVPWLYCFGFVLSFASLFAKT 222
                 3324444555555677778888888888888888777766655.556555599999999999999999999**********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       519  (0.0379608); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1085.70
//
Query:       MMETSP1325-20131115|9892_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.84    7.3  17.0       0.89    7.2  11.8    1.0  1  PF04147.7  Nop14-like family
        2.4    5.9  13.0        2.6    5.8   9.0    1.0  1  PF02724.9  CDC45-like protein
        5.6    6.0  17.2        5.9    5.9  11.9    1.0  1  PF05285.7  SDA1
        6.1    5.3  16.0        6.1    5.2  11.1    1.1  1  PF10446.4  Protein of unknown function (DUF2457)
        6.5    6.1  13.9        6.8    6.0   9.6    1.1  1  PF05764.8  YL1 nuclear protein
        6.9    5.6   9.0        7.4    5.5   6.2    1.1  1  PF05477.6  Surfeit locus protein 2 (SURF2)


Domain annotation for each model (and alignments):
>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  11.8   0.00039      0.89     353     411 ..       3      62 ..       1      80 [. 0.22

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00039
   PF04147.7 353 ddddeeeeeedv.dedeeeedeedeesddeeeeeeeee..........aseeeaeakkkkkktkkkkksa 411
                 +d+dee+ +ed+ d + ++   edee++dee+     +          +  +e+ +++   ++kk+ +  
  MMETSP1325-20131115|9892_1   3 EDEDEEKVGEDEeDPSRDDGWREDEEDEDEED-----DgesilltgegQ--SEKPNTP---TKKKNRRGG 62 
                 23333322222202222211111111111111.....111233333221..1111111...111111111 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   9.0    0.0012       2.6     136     201 ..       2      65 ..       1      75 [. 0.47

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0012
   PF02724.9 136 dedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsnesslakslrrrrrrereek 201
                 ded+d+e+   e+e++ s+++ + +de++ed++d+ ++   + + ++e+++   +++++rr  +++
  MMETSP1325-20131115|9892_1   2 DEDEDEEKVG-EDEEDPSRDDGWREDEEDEDEEDDGESILLTGEGQSEKPN-TPTKKKNRRGGKKH 65 
                 3333333333.3333334445566666666666655555555555555444.44444444433333 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  11.9    0.0026       5.9     112     164 ..       3      68 ..       1      81 [] 0.27

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0026
   PF05285.7 112 eDeegewvdvesd...eee.essDsedeeeesee...........eeeeeesekkkkeesdeekseee 164
                 eDe++e v ++++   +++   +D+ede+ee++            e+ + + +kk  ++   +k+++ 
  MMETSP1325-20131115|9892_1   3 EDEDEEKVGEDEEdpsRDDgWREDEEDEDEEDDGesilltgegqsEKPNTPTKKK--NRRGGKKHKKG 68 
                 1221122111111111111124444444443343446666654321112222222..21222222222 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  11.1    0.0027       6.1      54      98 ..       2      47 ..       1      73 [. 0.50

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0027
   PF10446.4 54 dededdee.ddddeDeddddddddeDdeddelddddstladasead 98
                deded+e+  +d+eD + dd+  ++++++de+dd +s l +++ ++
  MMETSP1325-20131115|9892_1  2 DEDEDEEKvGEDEEDPSRDDGWREDEEDEDEEDDGESILLTGEGQS 47
                3333333302333444444443333333333555555555544444 PP

>> PF05764.8  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   9.6     0.003       6.8      42     104 ..       2      67 ..       1      81 [] 0.48

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.003
   PF05764.8  42 EeedDeefeeeeeeeeeeeDsdfddseddeeesddee....egekelekeekekkkkrkkkkaykep 104
                 +e++Dee + e+ee+ +  D+   ++e+de e+dd e     ge + ek +   kkk+++ ++  ++
  MMETSP1325-20131115|9892_1   2 DEDEDEEKVGEDEEDPSR-DDGWREDEEDEDEEDDGEsillTGEGQSEKPNTPTKKKNRRGGKKHKK 67 
                 566677766666666665.888888877644444443122235555554444444443333333332 PP

>> PF05477.6  Surfeit locus protein 2 (SURF2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   6.2    0.0032       7.4     183     237 ..       9      67 ..       1      75 [. 0.65

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0032
   PF05477.6 183 kelekeqdtdeeddFetddedemeveseeke....qkrskkqseslkkkfkkahkkkkk 237
                 k  e+e+d   +d+++ d+ede e++  e      + +s+k ++++kkk ++  kk+kk
  MMETSP1325-20131115|9892_1   9 KVGEDEEDPSRDDGWREDEEDEDEEDDGESIlltgEGQSEKPNTPTKKKNRRGGKKHKK 67 
                 55566777778999999988877777776655554444566666777776666555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       725  (0.0530281); expected 273.4 (0.02)
Passed bias filter:                      460  (0.0336454); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 388.21
//
Query:       MMETSP1325-20131115|9888_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-10   38.8   0.8    5.2e-09   35.8   0.0    2.7  2  PF05645.8  RNA polymerase III subunit RPC82
  ------ inclusion threshold ------
      0.014   14.7   1.8       0.03   13.7   0.4    2.1  2  PF02002.12 TFIIE alpha subunit


Domain annotation for each model (and alignments):
>> PF05645.8  RNA polymerase III subunit RPC82
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.0   7.6e-13   5.2e-09      95     255 ..       2     130 ..       1     132 [. 0.85
   2 ?    1.9   0.2     0.017   1.2e+02     103     150 ..     121     176 ..     111     288 .. 0.60

  Alignments for each domain:
  == domain 1    score: 35.8 bits;  conditional E-value: 7.6e-13
   PF05645.8  95 ealdpglvlriNlerflvhlRderLvdlaksrigettaevyevaLkllekrsprlsadllleeedeksitftandiaralpksldlsksigKrkssnssaaekkklkteeseeeseengearlslieqhLklLassslgflrkig.....psggGeytVdfsrlie 255
                 +++++++ + i    f++ +++  +v+la+++  + t+ v +++++l++++  +  ++     ++ +++ +t+++i++al+++   s +                                + + + +++++L+++s+g++ +++     psg  +y+V++ ++i+
  MMETSP1325-20131115|9888_1   2 KDPKAKMLWSIGCAAFIQQFKSHLCVKLAEEKFNSETGDVLKTMFRLSAAEGGK--QQ----FTQRTTNALTVQEIFDALQTTDSGSDP-------------------------------MTRDTLLRYMQILSNDSVGMVGRVSqgssaPSGSTQYVVNVANIIR 130
                 5688999*****************************************776655..33....35789*************999998988...............................34468999*************9987333336888899999999987 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.017
   PF05645.8 103 lriNlerflvhlRderLvdla........ksrigettaevyevaLkllekrsprls 150
                 + +N+   + +lR++ + +++        ++ +  ++a +y+v+L   ++++++++
  MMETSP1325-20131115|9888_1 121 YVVNVANIIRFLRERTMHSILteryheeeNEATNGVCARIYQVLLHAKYAEQNQVA 176
                 56777777777777777777766666666666777788888888877666666544 PP

>> PF02002.12  TFIIE alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.19   1.3e+03      74     103 ..     121     148 ..     115     152 .. 0.65
   2 ?   13.7   0.4   4.4e-06      0.03      16      97 ..     158     242 ..     149     261 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.19
                 XXXXXXXXXXXXXXXXXXXXX-----SSS- CS
  PF02002.12  74 yrinyekllevvkkkleevvkkLekkleke 103
                 y +n  +++  ++++ ++ +  L ++ ++e
  MMETSP1325-20131115|9888_1 121 YVVNVANIIRFLRERTMHSI--LTERYHEE 148
                 77788888888887776654..44444444 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 4.4e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXX--- CS
  PF02002.12  16 vlvldvllrkgevteedlaeelkidlnelRklLakLydakLvkyrr..rkddetgwykyyyriny..ekllevvkkkleevvkkLe 97 
                 + + +vll+++ ++ +++a +  i  +e R  L+++y++k v y+   r+d + ++    + +n   ek   vv + l++ + +L+
  MMETSP1325-20131115|9888_1 158 ARIYQVLLHAKYAEQNQVADLAMIPMKEARIHLYQMYKDKYVTYQEvpRRDHNPETTIFLWCVNNsdEKFAVVV-DDLHKSMLNLR 242
                 56788999999999999999999********************997336899999999***9985214444444.44444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       958  (0.0700702); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.33s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1433.02
//
Query:       MMETSP1325-20131115|9893_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        9.5    5.8   6.7         15    5.2   4.6    1.3  1  PF14341.1 PilX N-terminal


Domain annotation for each model (and alignments):
>> PF14341.1  PilX N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   4.6    0.0011        15       4      25 ..       4      25 ..       2      38 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0011
   PF14341.1  4 ALvvalllllvltLlgvatiqg 25
                +L+++l+l+l ltL g +++ +
  MMETSP1325-20131115|9893_1  4 TLTLTLMLTLTLTLTGATVHDM 25
                699999***********99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|9896_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 244.07
//
Query:       MMETSP1325-20131115|9895_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-15   55.9   2.9    1.6e-09   36.6   0.0    2.9  2  PF00805.17 Pentapeptide repeats (8 copies)
    6.7e-12   44.9   2.9    1.8e-11   43.5   1.9    1.5  1  PF13599.1  Pentapeptide repeats (9 copies)
    5.8e-11   41.9   8.3    1.8e-05   24.4   2.5    3.2  2  PF13576.1  Pentapeptide repeats (9 copies)


Domain annotation for each model (and alignments):
>> PF00805.17  Pentapeptide repeats (8 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.3   1.7e-07   0.00077       5      35 ..       2      32 ..       1      36 [. 0.75
   2 !   36.6   0.0   3.5e-13   1.6e-09       5      39 ..      37      71 ..      34      72 .. 0.96

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 1.7e-07
  PF00805.17  5 gAnLrgAdLrgadLsgAdLtgAnLsgAnLsg 35
                +A+++ +++++a Ls   ++++nL +A++++
  MMETSP1325-20131115|9895_1  2 DADFSSTNFKDAQLSKGYFSKSNLDKADFTN 32
                6777777777777777777777777777775 PP

  == domain 2    score: 36.6 bits;  conditional E-value: 3.5e-13
  PF00805.17  5 gAnLrgAdLrgadLsgAdLtgAnLsgAnLsganls 39
                +++++gA L+ga++ +++Lt++ ++gA+ +ga+++
  MMETSP1325-20131115|9895_1 37 RVDFEGASLKGAIFQNTVLTSTSFEGADVTGADFT 71
                79********************************8 PP

>> PF13599.1  Pentapeptide repeats (9 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   1.9     4e-15   1.8e-11      10      78 .]       2      70 ..       1      70 [. 0.93

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 4e-15
   PF13599.1 10 ncklkgvnFsgaelkncnFeecklfkevnFsncdlkdadfseadlknasFsncdlknvdfsg.klkdadf 78
                +++++ +nF +a+l+   F+ ++l ++++F+n  ++ +df++a+lk+a F+n+ l+ ++f+g + ++adf
  MMETSP1325-20131115|9895_1  2 DADFSSTNFKDAQLSKGYFSKSNL-DKADFTNGVVDRVDFEGASLKGAIFQNTVLTSTSFEGaDVTGADF 70
                689999*****************9.8**********************************9879999998 PP

>> PF13576.1  Pentapeptide repeats (9 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   2.5   3.8e-09   1.8e-05       5      42 ..      19      53 ..       3      58 .. 0.89
   2 !   14.4   0.4   5.2e-06     0.024       1      30 [.      50      77 ..      50      82 .. 0.45

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 3.8e-09
   PF13576.1  5 eFsgsadFsnatFngsasFsnatFgnadFsgatFtgdv 42
                 Fs+s +++ a+F++++ +++++F++a++ ga+F  ++
  MMETSP1325-20131115|9895_1 19 YFSKS-NLDKADFTNGV-VDRVDFEGASLKGAIFQ-NT 53
                59999.999*******7.****************8.65 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 5.2e-06
   PF13576.1  1 FsgaeFsgsadFsnatFngsasFsnatFgn 30
                F +++++   +F++a+ +g+ +F++a +g+
  MMETSP1325-20131115|9895_1 50 FQNTVLTST-SFEGADVTGA-DFTEAYLGD 77
                444444444.5555555555.555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 733.88
//
Query:       MMETSP1325-20131115|9900_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.5  25.1      0.027   14.5  17.4    1.1  1  PF03247.9  Prothymosin/parathymosin family
      0.029   13.5  14.6      0.029   13.5  10.1    1.0  1  PF06524.7  NOA36 protein
      0.085   12.2  20.1       0.11   11.8  13.9    1.2  1  PF03066.10 Nucleoplasmin
       0.43   10.0  17.4       0.46    9.9  12.1    1.1  1  PF04546.8  Sigma-70, non-essential region
       0.45    9.6  15.2       0.47    9.5  10.5    1.1  1  PF05432.6  Bone sialoprotein II (BSP-II)
        0.5   10.5  22.7       0.64   10.1  15.7    1.3  1  PF09026.5  Centromere protein B dimerisation domain
       0.72    9.7   4.2       0.79    9.5   2.9    1.1  1  PF05132.9  RNA polymerase III RPC4
       0.89    8.8   5.1       0.96    8.7   3.6    1.0  1  PF06871.6  TraH_2
          1    7.8  26.0        1.1    7.7  18.0    1.0  1  PF10446.4  Protein of unknown function (DUF2457)
          1    9.2   9.0          1    9.2   6.3    1.1  1  PF08432.5  Fungal protein of unknown function (DUF1742)
        1.1    8.2  21.5        1.1    8.1  14.9    1.0  1  PF06213.7  Cobalamin biosynthesis protein CobT
        1.3    7.2  20.0        1.3    7.3  13.8    1.0  1  PF03344.10 Daxx Family
        1.4    6.6  21.2        1.2    6.8  14.7    1.0  1  PF04147.7  Nop14-like family
        1.5    8.4  18.9        1.5    8.4  13.1    1.0  1  PF04050.9  Up-frameshift suppressor 2
        1.5    8.0  12.1        1.5    7.9   8.4    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
        1.5    8.2   7.4        1.6    8.1   5.2    1.1  1  PF04386.8  Stringent starvation protein B
        1.9    7.0  15.3        1.9    7.0  10.6    1.0  1  PF03985.8  Paf1
          2    6.2  15.3        1.8    6.4  10.6    1.0  1  PF02724.9  CDC45-like protein
        2.3    6.6   5.2        2.2    6.6   3.6    1.0  1  PF11711.3  Inner membrane protein import complex subunit Tim54
        2.8    7.6  20.4          3    7.5  14.1    1.0  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        2.9    7.3   9.1          3    7.2   6.3    1.2  1  PF04281.8  Mitochondrial import receptor subunit Tom22
        2.9    7.4  12.8        3.1    7.4   8.8    1.1  1  PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
        3.2    6.2   8.4        3.4    6.2   5.8    1.0  1  PF04712.7  Radial spokehead-like protein
        3.4    7.0  11.8        3.5    6.9   8.2    1.0  1  PF03286.9  Pox virus Ag35 surface protein
        4.9    5.2  18.9          5    5.2  13.1    1.0  1  PF04006.7  Mpp10 protein
        5.6    4.9  12.4        5.1    5.0   8.6    1.0  1  PF08553.5  VID27 cytoplasmic protein
        7.3    6.1   8.5        8.6    5.8   5.9    1.3  1  PF06088.6  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
        9.6    4.9  15.2        9.5    5.0  10.5    1.0  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit


Domain annotation for each model (and alignments):
>> PF03247.9  Prothymosin/parathymosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5  17.4   5.4e-05     0.027      46      98 ..      21      70 ..       7      72 .] 0.52

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 5.4e-05
   PF03247.9 46 eaddeedeeeekeeedeeeegegeeeeeeeeeeeegatvkraaedeedkaetK 98
                  dde  +ee+++e++eee+++++++e+ee++++ +a+  r    + + a+ K
  MMETSP1325-20131115|9900_1 21 TKDDE--DEEDEDEDEEEEDDDEDDDEKEEDDDAAAAS-ARVGSVDVEAADDK 70
                33333..4444445555555555555555555555544.55544455555555 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5  10.1   5.9e-05     0.029     266     304 ..      16      54 ..       3      66 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5.9e-05
   PF06524.7 266 svnygyesdddeeesaedydeeededddddeeedetsen 304
                 + +   + d+dee+++ed++ee+d++ddd++eed+++ +
  MMETSP1325-20131115|9900_1  16 GRGMPTKDDEDEEDEDEDEEEEDDDEDDDEKEEDDDAAA 54 
                 445555666677777788777777777777766665443 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  13.9   0.00023      0.11     112     143 ..      22      53 ..      11      60 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00023
                 ......----XXXXXXXXXXXXXXXXXXXXXX CS
  PF03066.10 112 desldeeddeedeeeeddeedddeeeeeeees 143
                 ++++deed++edeeeedd+eddde+ee+++++
  MMETSP1325-20131115|9900_1  22 KDDEDEEDEDEDEEEEDDDEDDDEKEEDDDAA 53 
                 34456677777777777777777777776654 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9  12.1   0.00095      0.46      43      79 ..      21      54 ..       2      70 .. 0.40

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00095
   PF04546.8 43 eeseddeeeeeddddddededeeeeseeadegpdpee 79
                +++++dee+e++ d+++ed+de+  ++e++e  d   
  MMETSP1325-20131115|9900_1 21 TKDDEDEEDEDE-DEEEEDDDED--DDEKEEDDDAAA 54
                222222222222.1111111111..122222222222 PP

>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  10.5   0.00096      0.47     131     160 ..      24      53 ..       6      70 .. 0.56

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00096
   PF05432.6 131 kedesdedeeeeeeeeeeeeaeveeneqsv 160
                  ede dede+eeee+++e+++e ee++ + 
  MMETSP1325-20131115|9900_1  24 DEDEEDEDEDEEEEDDDEDDDEKEEDDDAA 53 
                 245555666666555555555555554433 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1  15.7    0.0013      0.64      13      40 ..      22      51 ..      13      69 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0013
   PF09026.5 13 esdseeeeedeeedeededeedee..edde 40
                + d +ee+ede+e+eed+de+d+e  edd+
  MMETSP1325-20131115|9900_1 22 KDDEDEEDEDEDEEEEDDDEDDDEkeEDDD 51
                557777778888888888888775213343 PP

>> PF05132.9  RNA polymerase III RPC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   2.9    0.0016      0.79      27      63 ..      22      56 ..       7      67 .. 0.40

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0016
   PF05132.9 27 keeeekeeeeeekeekeektesskeeksedksskles 63
                k  ++++ee+e+++e+ee+++++ +ek+ed+++ + s
  MMETSP1325-20131115|9900_1 22 K--DDEDEEDEDEDEEEEDDDEDDDEKEEDDDAAAAS 56
                2..1122333333333333333333333333333333 PP

>> PF06871.6  TraH_2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.6     0.002      0.96     152     199 ..      10      59 ..       2      66 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.002
   PF06871.6 152 PGeskaaeeaprsedeaeekesakeeaaded..aeseakeedvnkagiri 199
                 P ++   +  p+++de+ee+e+++ee +d+d  ++++++++d   a+ r+
  MMETSP1325-20131115|9900_1  10 PPTTAEGRGMPTKDDEDEEDEDEDEEEEDDDedDDEKEEDDDAAAASARV 59 
                 55555556677777777665555555555440045555556677777776 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  18.0    0.0022       1.1      53      88 ..      23      52 ..      11      71 .. 0.39

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0022
   PF10446.4 53 edededdeeddddeDeddddddddeDdeddeldddd 88
                +dede+d      eDed++++dddeDd++ e+ddd 
  MMETSP1325-20131115|9900_1 23 DDEDEED------EDEDEEEEDDDEDDDEKEEDDDA 52
                2222222......22222222222222222211111 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   6.3    0.0021         1      92     127 ..      22      57 ..       9      72 .] 0.57

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0021
   PF08432.5  92 kkekdkekekkkdkkddksekekekeeeekaeelkk 127
                 k ++d+e+e+++++++d++e+++ekee+++a+++++
  MMETSP1325-20131115|9900_1  22 KDDEDEEDEDEDEEEEDDDEDDDEKEEDDDAAAASA 57 
                 344555555555555555555566665555555544 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  14.9    0.0023       1.1     217     258 ..      20      61 ..       5      71 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0023
   PF06213.7 217 essdseekrdedddkedeeddaseeeesgdsdslskdedass 258
                  ++d+e+++ded+d+e+e+dd+ ++e+++d+d++++ +   s
  MMETSP1325-20131115|9900_1  20 PTKDDEDEEDEDEDEEEEDDDEDDDEKEEDDDAAAASARVGS 61 
                 345556665788888888888888888888886665544333 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  13.8    0.0027       1.3     446     479 ..      21      55 ..       3      72 .] 0.33

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0027
  PF03344.10 446 ekeedeeddekeeedkse.eeeeeeeeeeeeeead 479
                  k++++e+de+e+e++++ +e+++e+ee+++ +a+
  MMETSP1325-20131115|9900_1  21 TKDDEDEEDEDEDEEEEDdDEDDDEKEEDDDAAAA 55 
                 22222222222222222202222222222222222 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  14.7    0.0024       1.2     345     377 ..      22      52 ..       5      72 .] 0.42

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0024
   PF04147.7 345 vededeeeddddeeeeeedvdedeeeedeedee 377
                 ++dedee++d+dee  eed ded++e++e+d+ 
  MMETSP1325-20131115|9900_1  22 KDDEDEEDEDEDEE--EEDDDEDDDEKEEDDDA 52 
                 22233333333322..22222222222222111 PP

>> PF04050.9  Up-frameshift suppressor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  13.1     0.003       1.5      18      64 ..      22      68 ..       8      72 .] 0.65

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.003
   PF04050.9 18 eededdessdeeeeeeedeeedeeseseeeeievtrkeeevdpeeea 64
                + ded+e++de+eeee+d+e+d+e+e++++    + ++  vd e+  
  MMETSP1325-20131115|9900_1 22 KDDEDEEDEDEDEEEEDDDEDDDEKEEDDDAAAASARVGSVDVEAAD 68
                23444456666666666666677788888888888888888877664 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   8.4    0.0032       1.5      61      90 ..      23      52 ..       7      71 .. 0.42

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0032
   PF07423.6 61 eeeevkeeekeaakdedkeddsesekkdee 90
                ++e++++e++++ +++d+edd+e+e++d++
  MMETSP1325-20131115|9900_1 23 DDEDEEDEDEDEEEEDDDEDDDEKEEDDDA 52
                222222222222222222222222222222 PP

>> PF04386.8  Stringent starvation protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.2    0.0033       1.6     111     152 ..      22      58 ..       4      63 .. 0.54

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0033
                 S---XXXX...........XXXXXXXXXXXXXXXXXXXXXXX CS
   PF04386.8 111 eaeeaeeeeeeeeeeeekakeeeaeeakpeeeekekkkpsle 152
                 +++e+ee+     e+e++++e+++e+++++ee++++   s++
  MMETSP1325-20131115|9900_1  22 KDDEDEED-----EDEDEEEEDDDEDDDEKEEDDDAAAASAR 58 
                 33333333.....33444444444555555455555555555 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  10.6    0.0039       1.9     374     424 ..      22      67 ..      11      72 .] 0.56

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0039
   PF03985.8 374 dedeeeeeeqrseeeeeeeeedeeeeeseeeeeleskeksadeessdeesk 424
                 ++de+ee+   ++e+eeee++de+++e+ee++++  ++  a+  s+d e +
  MMETSP1325-20131115|9900_1  22 KDDEDEED---EDEDEEEEDDDEDDDEKEEDDDAAAAS--ARVGSVDVEAA 67 
                 23333333...356778888888888877777765555..33333333333 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  10.6    0.0036       1.8     135     164 ..      24      53 ..       3      72 .] 0.37

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0036
   PF02724.9 135 sdedsdseddeeeeessasekrksesdede 164
                 +++++d+++deeee+ ++++++k+e+d++ 
  MMETSP1325-20131115|9900_1  24 DEDEEDEDEDEEEEDDDEDDDEKEEDDDAA 53 
                 111111111111111111111111121111 PP

>> PF11711.3  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   3.6    0.0046       2.2     219     250 ..      22      50 ..       2      68 .. 0.40

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0046
   PF11711.3 219 ekteaaeeeaeeeeekaeeekeekedeeeeek 250
                 ++ e++e+e e+eee   e+++e++de+ee++
  MMETSP1325-20131115|9900_1  22 KDDEDEEDEDEDEEE---EDDDEDDDEKEEDD 50 
                 111111222222211...11222222222222 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  14.1    0.0062         3     272     303 ..      21      52 ..       9      59 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0062
                 XXXXXXXXXXXXX------------------- CS
   PF03153.8 272 eeadedeeekdkvieeDlddseDDvseedeed 303
                  ++dedee++d+++ee++dd++DD+ eed++ 
  MMETSP1325-20131115|9900_1  21 TKDDEDEEDEDEDEEEEDDDEDDDEKEEDDDA 52 
                 45677777788889999999999987777665 PP

>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   6.3    0.0062         3      29      50 ..      24      46 ..       6      67 .. 0.51

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0062
   PF04281.8 29 deeedeedtdsdi.sddsdveed 50
                de+e++ed d+++ +dd+d +e+
  MMETSP1325-20131115|9900_1 24 DEDEEDEDEDEEEeDDDEDDDEK 46
                22222222111110222221111 PP

>> PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   8.8    0.0064       3.1       9      42 ..      23      56 ..      17      72 .] 0.57

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0064
   PF05320.7  9 dyesdddeeeeyeeeeedeedaeslessdvsslk 42
                d+e+++de+e+ eee++de+d e++e++d +++ 
  MMETSP1325-20131115|9900_1 23 DDEDEEDEDEDEEEEDDDEDDDEKEEDDDAAAAS 56
                5556666666666666666666666666665433 PP

>> PF04712.7  Radial spokehead-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.8    0.0069       3.4     355     383 ..      21      49 ..      10      61 .. 0.58

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0069
   PF04712.7 355 ekkeeeeeeeeeedeeeeeeeeeeepEeg 383
                 +k +e+ee+e+e++eee+++e+ +e+Ee 
  MMETSP1325-20131115|9900_1  21 TKDDEDEEDEDEDEEEEDDDEDDDEKEED 49 
                 33444444455555555555555555554 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   8.2    0.0072       3.5      80     116 ..      22      56 ..       8      71 .. 0.39

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0072
   PF03286.9  80 eekkeeededkdteenendddekeeskdskesasane 116
                 ++ ++eeded+d+ee+++  de++++k+ +++a+a +
  MMETSP1325-20131115|9900_1  22 KDDEDEEDEDEDEEEEDD--DEDDDEKEEDDDAAAAS 56 
                 223333333332222222..22222222222222222 PP

>> PF04006.7  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  13.1      0.01         5     102     147 ..      22      68 ..      11      72 .] 0.48

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.01
   PF04006.7 102 seedgsdeseedeedeaddeeeeeelEeee.mldeadleeveessee 147
                 + ++++++++edee+e+dde+++e+ E+ +    +a + +v+ + ++
  MMETSP1325-20131115|9900_1  22 KDDEDEEDEDEDEEEEDDDEDDDEKEEDDDaAAASARVGSVDVEAAD 68 
                 33444444555555555555555544444443344444444444333 PP

>> PF08553.5  VID27 cytoplasmic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   8.6     0.011       5.1     382     410 ..      23      51 ..       3      71 .. 0.44

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.011
   PF08553.5 382 edeeeeeeaeeeeeeeeeeeedeeegesk 410
                 +de+ee e+e eeee+++e++de+e+   
  MMETSP1325-20131115|9900_1  23 DDEDEEDEDEDEEEEDDDEDDDEKEEDDD 51 
                 22222222222222222222222222211 PP

>> PF06088.6  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   5.9     0.018       8.6     126     154 ..      23      53 ..       8      71 .. 0.48

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.018
   PF06088.6 126 ssededdeddededeaakiesn..sdseese 154
                 + ede+ded+++e+e+++ +++  +++++ +
  MMETSP1325-20131115|9900_1  23 DDEDEEDEDEDEEEEDDDEDDDekEEDDDAA 53 
                 3333333333222222222222112223333 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  10.5     0.019       9.5      42      74 ..      22      53 ..       4      68 .. 0.50

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.019
  PF03896.11 42 eddvvdedeedeaeveedekteaeeeedeeeag 74
                +dd+ +ede+++ e+e+d++ + e+eed++ a 
  MMETSP1325-20131115|9900_1 22 KDDEDEEDEDEDEEEEDDDEDDDEKEEDDD-AA 53
                233333333333334444333344444444.22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       823  (0.060196); expected 273.4 (0.02)
Passed bias filter:                      553  (0.0404476); expected 273.4 (0.02)
Passed Vit filter:                       168  (0.0122879); expected 13.7 (0.001)
Passed Fwd filter:                        56  (0.00409596); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.49u 0.44s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|9898_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-11   43.0   9.5    3.6e-11   42.7   6.6    1.1  1  PF01699.19 Sodium/calcium exchanger protein
    6.4e-08   31.2   1.1    1.2e-07   30.4   0.2    2.0  2  PF00036.27 EF hand
    1.4e-05   24.4   0.5    3.2e-05   23.3   0.3    1.7  1  PF13833.1  EF-hand domain pair
    4.7e-05   23.3   0.1    4.7e-05   23.3   0.1    1.7  2  PF13499.1  EF-hand domain pair
    0.00018   20.9   1.8    0.00099   18.6   0.1    2.6  2  PF13405.1  EF-hand domain
    0.00031   19.8   0.1    0.00031   19.8   0.1    2.1  3  PF13202.1  EF hand
  ------ inclusion threshold ------
       0.01   15.5   1.0      0.016   14.8   0.4    1.5  1  PF04217.8  Protein of unknown function, DUF412


Domain annotation for each model (and alignments):
>> PF01699.19  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   6.6   1.9e-14   3.6e-11       2     137 ..      86     216 ..      85     218 .. 0.94

  Alignments for each domain:
  == domain 1    score: 42.7 bits;  conditional E-value: 1.9e-14
  PF01699.19   2 lislladilvesieqiakvlglsetvlgltllAlgtsapElissiiaalkg...agdlalgsivGSalfnlllviglcvlisplgekriqkvlvfkvtldfsflllvllllllivllsdgrltvweglvllllyilylv 137
                 ++ l++d lv+ i+++++ +g++   l+++l +++t+  Eli+s+ +a k+   ++  +l +++G+a++n ++++g+ +l+++++       l + ++++   +++v ++l+++ +   +++tv  g++ l+ly+++l+
  MMETSP1325-20131115|9898_1  86 MVLLFSDPLVDVINELGDLTGIPVFYLAFLLAPMVTNGSELIASYRFAQKKtknSITNSLQQLYGAAIMNNTMTLGVFLLLIAMQ------GLYWDYSAESIAIVFVQVALFCLCF--TRVMTVASGFAVLALYPFCLL 216
                 78899*********************************************7777**************************99997......5899999999999999999999999..9*****************997 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       4.4   8.6e+03      16      22 ..       3       9 ..       3      13 .. 0.75
   2 !   30.4   0.2   5.9e-11   1.2e-07       2      28 ..      26      52 ..      25      53 .. 0.89

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 4.4
                EBEHHHH CS
  PF00036.27 16 kIsfeEf 22
                +++ +E+
  MMETSP1325-20131115|9898_1  3 YLDADEL 9 
                6788887 PP

  == domain 2    score: 30.4 bits;  conditional E-value: 5.9e-11
                HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                lk +F+efD+Dg+G Is++Ef+  ++k
  MMETSP1325-20131115|9898_1 26 LKLMFAEFDTDGNGEISLQEFCIGVEK 52
                789******************987765 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.3   1.6e-08   3.2e-05      24      50 ..      23      49 ..       3      53 .. 0.89

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 1.6e-08
   PF13833.1 24 eeevdilfrefDtdgdGkisfeEFcvl 50
                ++++  +f efDtdg+G is+ EFc  
  MMETSP1325-20131115|9898_1 23 ADQLKLMFAEFDTDGNGEISLQEFCIG 49
                578889*******************65 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.1   2.4e-08   4.7e-05      16      63 ..       3      47 ..       1      50 [. 0.77
   2 ?   -3.3   0.1       4.7   9.3e+03       9      13 ..      58      62 ..      53      64 .. 0.56

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 2.4e-08
   PF13499.1 16 yldkeeLlr.llkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63
                yld +eL   + k +g +++ ++++ +    f+e+D++g+G +s++Ef+
  MMETSP1325-20131115|9898_1  3 YLDADELNIvFGKEFGINKRADQLKLM----FAEFDTDGNGEISLQEFC 47
                677777754144667777778888888....*****************8 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 4.7
   PF13499.1  9 lDkdg 13
                lDkd 
  MMETSP1325-20131115|9898_1 58 LDKDD 62
                44444 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.36     7e+02      16      27 ..       3      14 ..       2      19 .. 0.82
   2 !   18.6   0.1   5.1e-07   0.00099       3      23 ..      27      47 ..      25      58 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.36
                -B---HHHHHHH CS
   PF13405.1 16 kidaeELrdaLr 27
                ++da+EL  ++ 
  MMETSP1325-20131115|9898_1  3 YLDADELNIVFG 14
                89*****98876 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 5.1e-07
                H---GCC-------B---HHH CS
   PF13405.1  3 reaFklfDkdgdGkidaeELr 23
                +  F  fD+dg+G+i+++E+ 
  MMETSP1325-20131115|9898_1 27 KLMFAEFDTDGNGEISLQEFC 47
                557****************96 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.2   4.4e+03      16      21 ..       4       9 ..       3      10 .. 0.79
   2 !   19.8   0.1   1.6e-07   0.00031       4      21 ..      29      46 ..      26      54 .. 0.89
   3 ?   -2.8   0.4       2.2   4.4e+03       8      12 ..      58      62 ..      56      63 .. 0.53

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 2.2
                B-HHHH CS
   PF13202.1 16 IsreEL 21
                ++++EL
  MMETSP1325-20131115|9898_1  4 LDADEL 9 
                789998 PP

  == domain 2    score: 19.8 bits;  conditional E-value: 1.6e-07
                HHHHH--S----B-HHHH CS
   PF13202.1  4 tFrafDlNgDGkIsreEL 21
                +F +fD++g G Is +E+
  MMETSP1325-20131115|9898_1 29 MFAEFDTDGNGEISLQEF 46
                7****************9 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 2.2
                H--S- CS
   PF13202.1  8 fDlNg 12
                +D++ 
  MMETSP1325-20131115|9898_1 58 LDKDD 62
                46665 PP

>> PF04217.8  Protein of unknown function, DUF412
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.4   8.3e-06     0.016      50      82 ..     143     174 ..     116     177 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 8.3e-06
   PF04217.8  50 vllqlalaglsllpqaiavalfalslPlqGlyW 82 
                   lq+ + g +++ +++++ +f+l + +qGlyW
  MMETSP1325-20131115|9898_1 143 NSLQQLY-GAAIMNNTMTLGVFLLLIAMQGLYW 174
                 4556666.9999********************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       669  (0.0489321); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 993.40
//
Query:       MMETSP1325-20131115|9901_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 424.35
//
Query:       MMETSP1325-20131115|9902_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 302.94
//
Query:       MMETSP1325-20131115|9904_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 908.62
//
Query:       MMETSP1325-20131115|9903_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 257.72
//
Query:       MMETSP1325-20131115|9897_1  [L=401]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-74  251.5   0.0    1.4e-74  251.3   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.3   0.0     1e-78   1.4e-74     336     708 .]       2     399 ..       1     399 [. 0.90

  Alignments for each domain:
  == domain 1    score: 251.3 bits;  conditional E-value: 1e-78
  PF03028.10 336 ddfDrrllrtyleelfteelldeelelap........kdesfkvPekkeyeeyleyieeLpkeesPelyGLhaNaeivfltketeklirtllelqpreaeeeegsgksreekvkqvlkdileklpklfdkeelkekltae.eekdplvvvlvqEiermnillkeirrslkelskglkGeltiteeleellkallkdkvPasWakkayps.....lkgLaswlsdllkRikqlekwtedllkpktvwlsglfnpqsfltairQsvarkn...kwpLdklalqvevtkkekeetes.apeegvyveGlfleGarwdlkekllaesklkellsalpviwvkavea........dkkeeksvyecPvYktkaRkeltlvltlklktke..kkskwilagvalllq 708
                 d+ D r+ rty ++ +t++   e + + p        k+ +++vP  +e++ey ++i  +p+++sPe++GLh+Na+ +++ ke+++l+ tl e+qp+  +  +g g+sre++v +  ++++++lp+    ++  +k+++      pl+++l qEi+r+++++ + r  lk+l++++kGe+++t+el+e l++l+ ++vP+ W+           l +++ w+s l  R +q ++w ++ ++p+++ l+ +fnp++flta++Q+v rk+   kw+Ld+++ ++e t+ e+ e+   +p+egvyv+Glfl+G +w++++++l+es++k+l+ ++pv++v a +         +    +  yecPvYk+ +R +  +++ + l++ e  ++++w+l+gvall++
  MMETSP1325-20131115|9897_1   2 DNLDTRMFRTYTQQWLTTNTCAEGYTYNPatpifpisKNFQYTVPVFAEHKEYKTFISGFPEVDSPEIFGLHPNADLTYRVKEVNALLATLGETQPKGGG--GGGGVSREDVVFAKSTELMDRLPEDYIEDDYVAKINKMgGLSIPLNIFLYQEIQRLQKVIGKARFILKQLQLAIKGEVVMTDELQETLDSLFDARVPKLWTYTITGDefswiLPTIGLWFSSLIFRDDQDRSWLNT-GRPSAFALTLFFNPNGFLTAMKQEVVRKHkadKWSLDDVVDRTEATNFERVEQVRaPPAEGVYVHGLFLDGSAWNRHDNQLVESEPKKLFTSMPVLFVTANSFsdqlkvrkEMFGPQGPYECPVYKYPKRTDRFFIFFVTLRCTEvkPPAHWTLRGVALLCN 399
                 889*******************9999999999999*9***********************************************************9998..688999*****************88888888888876547889*********************************************************86543331111136899*****************98.***************************997779***************9988877699***************************************98865421111111222345679************99********9998899***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.38s 00:00:01.14 Elapsed: 00:00:00.52
# Mc/sec: 1847.96
//
Query:       MMETSP1325-20131115|9907_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.041   13.6   0.1       0.13   12.0   0.1    1.8  1  PF01363.16 FYVE zinc finger
       0.17   11.9   1.1        3.6    7.6   0.1    2.4  2  PF10367.4  Vacuolar sorting protein 39 domain 2


Domain annotation for each model (and alignments):
>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.9e-05      0.13      18      66 ..       7      86 ..       2      89 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.9e-05
  PF01363.16 18 kFsltrrrhhCrlCGkvvC..........................skCsskrvekl...............eeeaaeekevrvCkeClee 66
                +++l +r++ C lC + +                           +         l               ++  a  +evrvC+ C + 
  MMETSP1325-20131115|9907_1  7 RYKL-KRKKKCGLCFREFSvvnlvlsvphkaivdmqntwsxeelmD---------LngrkpekkiyqvptkQQAPALYDEVRVCVYCAQF 86
                5555.99999999999888666666666555555553333333330.........14444444444444544566667888******985 PP

>> PF10367.4  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1   0.00053       3.6      69     102 ..       4      38 ..       1      43 [. 0.88
   2 ?    3.0   0.0     0.014        98      61      90 ..      60      89 ..      40      99 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00053
   PF10367.4  69 rsrkvkiteekvCavCkkrlge.svfvvyPdgtvv 102
                  ++++k++++k C +C + ++  +++  +P + +v
  MMETSP1325-20131115|9907_1   4 AEERYKLKRKKKCGLCFREFSVvNLVLSVPHKAIV 38 
                 578999***************98999999999998 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.014
   PF10367.4 61 veeellkersrkvkiteekvCavCkkrlge 90
                  +++ +++++    +e +vC  C + +++
  MMETSP1325-20131115|9907_1 60 KIYQVPTKQQAPALYDEVRVCVYCAQFFQK 89
                45666788899999999*******988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       681  (0.0498098); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 682.04
//
Query:       MMETSP1325-20131115|9906_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-24   83.3   0.0    1.6e-23   82.3   0.0    1.5  1  PF00466.15 Ribosomal protein L10
     0.0082   16.4  10.3     0.0082   16.4   7.1    1.7  2  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF00466.15  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.3   0.0   2.3e-27   1.6e-23       1      98 [.       3     106 ..       3     108 .. 0.96

  Alignments for each domain:
  == domain 1    score: 82.3 bits;  conditional E-value: 2.3e-27
                 --HHHHHHHHHHHHHHHCTTSEEEEE------HHHHHHHHHHHHHH--EEEEE-HHHHHHHHHHTT-..-......-GGGG---EEEEEE---THHHHHHHHHH CS
  PF00466.15   1 ktkekKeelvkelkellkkyssvlvvdydgltvkqlqelRkelrekgaelkvgkntlmkrAlektgeeek......lkellkgptaliftnedpvelakvlekf 98 
                 ++ke+K+ ++ +++el+++ys+++vv++d+++++q+q++R +lr  +  +++gknt+m++++++ ge +       l +l+kg+++++ftn+d++e+ +vle++
  MMETSP1325-20131115|9906_1   3 MSKERKAWYFGRMEELIQTYSKLFVVSVDNVGSNQMQQIRLALRPLDTVILMGKNTMMRKIIKNFGEANPghpfcnLLPLVKGNIGFVFTNSDLAEVRDVLEAN 106
                 689*************************************************************99965479999999***********************987 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.5     1e+04      36      47 ..     100     111 ..      89     134 .. 0.57
   2 !   16.4   7.1   1.2e-06    0.0082       1      72 [.     232     297 ..     232     303 .. 0.59

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 1.5
  PF00428.14  36 keliangsakla 47 
                 ++++++ ++ + 
  MMETSP1325-20131115|9906_1 100 RDVLEANRVPAP 111
                 444444433322 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 1.2e-06
  PF00428.14   1 eptaadikavlkaagveveaerlkllvkalegkdikeli.angsaklaaaaaaaaaaaaaaaaaaaaeeekke 72 
                 +pt a++++++ +a++++ +++++ +  ++e+ d  +++  +++ k       a aa+a++++aa+aee+++ 
  MMETSP1325-20131115|9906_1 232 YPTIASVPHSICNAFKTLVSIAVECDSYSFEKADAYKALvPKAAPK-------AEAAPAEEKEAAPAEEPAAA 297
                 79***********************988887776665550433333.......22222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.52
# Mc/sec: 1400.95
//
Query:       MMETSP1325-20131115|9908_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.32s 00:00:00.66 Elapsed: 00:00:00.44
# Mc/sec: 403.02
//
Query:       MMETSP1325-20131115|9905_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.35    9.3   3.4       0.52    8.8   2.3    1.2  1  PF04625.8 DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.3   3.8e-05      0.52     106     129 ..     142     165 ..     138     224 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 3.8e-05
   PF04625.8 106 aapvpapapaaaaapaaasapaad 129
                 aa v apapa+a+apa a+a  + 
  MMETSP1325-20131115|9905_1 142 AAEVTAPAPAPAPAPAPAPASLPG 165
                 566666666666665555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       472  (0.0345231); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.35s 00:00:01.22 Elapsed: 00:00:00.48
# Mc/sec: 2536.14
//
Query:       MMETSP1325-20131115|9910_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   21.4   0.0    0.00017   20.9   0.0    1.2  1  PF01612.15 3'-5' exonuclease
    0.00023   21.5   0.1    0.00026   21.3   0.1    1.1  1  PF01322.15 Cytochrome C'


Domain annotation for each model (and alignments):
>> PF01612.15  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.5e-08   0.00017     134     170 ..       4      40 ..       1      42 [. 0.93

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 2.5e-08
                 CTTTTS-TT.CSS-THHHHHHHHHHHHTHHHHHHHHH CS
  PF01612.15 134 keeqiakwqkarplleeqleYAaeDadvllrlfkkLe 170
                 k+ q ++w +  pl+ +q++YAa+Da++ + +f++L+
  MMETSP1325-20131115|9910_1   4 KKLQRSNWGAPAPLSFKQVQYAAQDAWAAAAIFEELA 40 
                 7889*****999*********************9996 PP

>> PF01322.15  Cytochrome C'
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   3.8e-08   0.00026      24      96 ..      17      89 ..       5      98 .. 0.79

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 3.8e-08
                HCTS-----HHHHHHHHHHHHHHCCCGCGCG-CCG-TTT---B-CHHHHSCCCHHHHHHHHHHHHHHCHHHHH CS
  PF01322.15 24 makgekpydaaavaaaaaalaalakklpeafpegsdkgkateakpaiWedkadfkakaakfeeaaaelaaaak 96
                    +++y a+ + aaaa +++la + p++f  g  +  + +a+++iWe++ +   + +++++ + + aa  +
  MMETSP1325-20131115|9910_1 17 LSFKQVQYAAQDAWAAAAIFEELACRRPDLFGGGGAAPPQERALAEIWERRTERRVARDALHKVSRAYAARLE 89
                55567899***********************766666666***********9999988888887777666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|9913_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 663.99
//
Query:       MMETSP1325-20131115|9914_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2465  (0.180295); expected 273.4 (0.02)
Passed bias filter:                      709  (0.0518578); expected 273.4 (0.02)
Passed Vit filter:                       119  (0.00870392); expected 13.7 (0.001)
Passed Fwd filter:                        39  (0.00285255); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.40s 00:00:01.17 Elapsed: 00:00:00.56
# Mc/sec: 492.11
//
Query:       MMETSP1325-20131115|9916_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 354.24
//
Query:       MMETSP1325-20131115|9918_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|9921_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 380.85
//
Query:       MMETSP1325-20131115|9922_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-09   34.7   0.0    4.9e-09   34.6   0.0    1.0  1  PF13844.1 Glycosyl transferase family 41
  ------ inclusion threshold ------
      0.018   15.0   0.0      0.021   14.8   0.0    1.0  1  PF13692.1 Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> PF13844.1  Glycosyl transferase family 41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   7.1e-13   4.9e-09     337     400 ..       2      65 ..       1      66 [] 0.97

  Alignments for each domain:
  == domain 1    score: 34.6 bits;  conditional E-value: 7.1e-13
   PF13844.1 337 lgleaerivfsnvaakeehvrrGqladvcldtplcnGhttgmdvlwaGtpvvtlpletlasrva 400
                 +g++++ri f++  ++ ++  r  + d+ ldt     ht + d lw G+pv+t    ++a rv 
  MMETSP1325-20131115|9922_1   2 RGVNPSRIFFAPKVSRADYFLRMSVVDLFLDTRYYGAHTVAADALWVGVPVLTQHGASFAGRVG 65 
                 699***********************************************************96 PP

>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0     3e-06     0.021      52     103 ..       6      57 ..       2      65 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 3e-06
   PF13692.1  52 epnveflgfv..eelaellasadvglaplrfgeglplKlleylaaGlPvvasdi 103
                 ++++ f ++v  +++   ++  d++l +  +g+  ++   ++l++G+Pv++ + 
  MMETSP1325-20131115|9922_1   6 PSRIFFAPKVsrADYFLRMSVVDLFLDTRYYGA--HTVAADALWVGVPVLTQHG 57 
                 459999****655999999999*****776665..789************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 322.77
//
Query:       MMETSP1325-20131115|9919_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1126.29
//
Query:       MMETSP1325-20131115|9920_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-53  181.8   0.2      2e-53  181.5   0.1    1.1  1  PF04547.7 Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.5   0.1   1.4e-57     2e-53     292     451 ..      19     174 ..       4     175 .. 0.96

  Alignments for each domain:
  == domain 1    score: 181.5 bits;  conditional E-value: 1.4e-57
   PF04547.7 292 eekesleqaekeselqtyevs.gtfddylemviqfGyvvLFsaafPlapllalinniieirsdafklltelrRpvpqraesIGqWqkilellgvlavitNafliaftsdgqlqrllndlslaarlllvvvlehvvlllkyliavlipdipewvreelkree 451
                 ee  +++ +e+++ +++y+++ ++f+dylemviqfGy +LFs++f lapl+a++nn +e+r+da+k++t+ rRp+p  ae+IG+Wq +lel+++la++tN ++++fts++ +q+   +     r+++++v+eh+++  k++ a +ipd+p++v+++lkr+e
  MMETSP1325-20131115|9920_1  19 EEALKMTAIEEQYVMEEYDTTlDLFNDYLEMVIQFGYATLFSCSFTLAPLMAYVNNYVELRVDAWKICTQSRRPLPGGAEDIGTWQSVLELMSILAIMTNLGIVCFTSEKLVQASRGW-----RVVWFIVIEHFAVGAKIVAAAIIPDCPDEVAIQLKRQE 174
                 67778999***********989**************************************************************************************9999999999.....9***********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.63
# Mc/sec: 905.29
//
Query:       MMETSP1325-20131115|9917_1  [L=569]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       504  (0.0368637); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.92u 0.36s 00:00:01.28 Elapsed: 00:00:00.87
# Mc/sec: 1567.27
//
Query:       MMETSP1325-20131115|9926_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-18   64.2   0.0    9.5e-18   64.1   0.0    1.0  1  PF02779.19 Transketolase, pyrimidine binding domain


Domain annotation for each model (and alignments):
>> PF02779.19  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.0     7e-22   9.5e-18      19     107 ..       2      81 ..       1      82 [] 0.97

  Alignments for each domain:
  == domain 1    score: 64.1 bits;  conditional E-value: 7e-22
                 C-TTEEEEESS-HHHHTTHHHHHHEGG--EGEEE--S-HHHHHHHH---TTCGTSEEEEEECEHHHHG..HHGGHHHHHHHHHHTT--- CS
  PF02779.19  19 edpevvllgaDvargtfsvrkgllhdqgegrvidsgisEqamlgfavGaalagpllviweaqfgdFangAqiyadqairsgeakgklpv 107
                 +d +vv+++a++ +gt+ + +g +++    r +d+gi+Eq++++fa+++a++g  l+++++++++F++    + ++++++++  ++lpv
  MMETSP1325-20131115|9926_1   2 DDRKVVGITAAMPGGTGMDLFGRRFPS---RTYDVGIAEQHAVTFAAAMAAEG--LKPFCCIYSTFMQ----RGYDQVVHDVVIQGLPV 81 
                 6899***********************...***********************..*************....**********9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 418.09
//
Query:       MMETSP1325-20131115|9929_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       566  (0.0413985); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 365.76
//
Query:       MMETSP1325-20131115|9928_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       466  (0.0340843); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 751.17
//
Query:       MMETSP1325-20131115|9927_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 803.22
//
Query:       MMETSP1325-20131115|9930_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-13   48.5   5.2    4.9e-13   48.2   3.6    1.1  1  PF11700.3  Vacuole effluxer Atg22 like
    0.00051   18.7   0.2    0.00051   18.7   0.2    2.2  3  PF07690.11 Major Facilitator Superfamily
     0.0063   16.0   1.9     0.0063   16.0   1.3    1.8  2  PF07937.6  Protein of unknown function (DUF1686)
  ------ inclusion threshold ------
       0.77    9.2   7.8       0.25   10.8   0.3    2.9  2  PF04246.7  Positive regulator of sigma(E), RseC/MucC


Domain annotation for each model (and alignments):
>> PF11700.3  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   3.6   1.4e-16   4.9e-13      39     211 ..      65     221 ..      39     247 .. 0.77

  Alignments for each domain:
  == domain 1    score: 48.2 bits;  conditional E-value: 1.4e-16
   PF11700.3  39 agvllsdkttpcsa.eddqcvvkvagieintasfalytfsisvliqavlvisisgaaDygnyRknlllafaligslstilflfvtpkqyllgavlaiigntcfgasfvllnSflPllvrddpevrakeeeaadsteseeeedksdeltetkisslglalgyigailvliisilv 211
                 a  +l  k ++c++ + ++c  +v+g  +  + ++  t s++ ++ av++++i+++ D++n R ++  + al+++++t++ + v+++++  +  l +++ ++++  +++  ++lP+l+++  + +  e++                ++++ i+s g+ + + +++l  i+  ++
  MMETSP1325-20131115|9930_1  65 AVLDLAAKAAGCDTdDLQNCKGRVYG--MRPEDIYSATASVAGVVMAVMLPLIGAIIDHTNKRMQIGQMTALAMAAVTLAQACVNKDTWFFVTCLQVVSICAYTFHNLAQLAYLPELTANLEKNQGVEAA---------------DKERNVINSQGTFWMFATEVLTIIVVYGL 221
                 33344555667776444689999999..788889999**************************************************************************************7666533...............34456777777777666666655554444 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.4      0.51   1.7e+03      89     107 ..      41      59 ..      19      75 .. 0.43
   2 !   18.7   0.2   1.5e-07   0.00051     237     330 ..      88     180 ..      86     189 .. 0.82
   3 ?   -2.5   1.6      0.41   1.4e+03     136     240 ..     216     227 ..     197     248 .. 0.36

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 0.51
  PF07690.11  89 llvlrvlqGlgagalfpag 107
                   v+ ++ G+++ga++ + 
  MMETSP1325-20131115|9930_1  41 ETVAYLMDGVCSGAIIMSN 59 
                 3333334444433333332 PP

  == domain 2    score: 18.7 bits;  conditional E-value: 1.5e-07
  PF07690.11 237 vlglsp.glllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalglallaftssavwlllvlvliGf.glglvfptllalasdla 330
                 v+g+ p   ++a+   +++++++a++ +l+g+++d++++ r+ +  + +l++aa+ la + + +++++++  l ++++ ++ + + + la++ +l+
  MMETSP1325-20131115|9930_1  88 VYGMRPeDIYSAT--ASVAGVVMAVMLPLIGAIIDHTNK-RMQIGQMTALAMAAVTLAQACVNKDTWFFVTCLQVVSIcAYTFHNLAQLAYLPELT 180
                 6777777557888..9********************775.77888888888888888888888788888889999999999999999999999887 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 0.41
  PF07690.11 136 ilgpllggllasslgWravFlilailsllaavlvllllprepperkrkspaeelrkepaplvpawklllkppvlwillialllfffvfsglltllplylqevlgl 240
                 i+ ++lg +l                                                                                              l
  MMETSP1325-20131115|9930_1 216 IVVYGLGTALG---------------------------------------------------------------------------------------------L 227
                 11112222221.............................................................................................1 PP

>> PF07937.6  Protein of unknown function (DUF1686)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.24   8.3e+02      97     110 ..      54      67 ..      27      86 .. 0.69
   2 !   16.0   1.3   1.8e-06    0.0063      72     178 ..     103     217 ..      90     223 .. 0.57

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.24
   PF07937.6  97 vvtagnillaaacl 110
                 +++++ni l++a l
  MMETSP1325-20131115|9930_1  54 AIIMSNIFLSSAVL 67 
                 34555555555555 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 1.8e-06
   PF07937.6  72 vag.igivml....yvQdlvkkkmskrqvcvvtagnillaaaclagsvklalpsvedrsslvcvglvvfa...allllvsivekgeggekveserkgavvksv...llvmsvlvvlll 178
                 vag + +vml    +  d  +k+m+  q+ +++++ + la ac+  +   +  ++ +  s++      +a    l  l  ++ek+ +g ++ ++  + v++s+   ++  + ++++++
  MMETSP1325-20131115|9930_1 103 VAGvVMAVMLpligAIIDHTNKRMQIGQMTALAMAAVTLAQACVNKDTW-FFVTCLQVVSICAYTFHNLAqlaYLPELTANLEKN-QGVEAADKERN-VINSQgtfWMFATEVLTIIV 217
                 3332223343111134566778**********************77775.45556666665555555555000555566777654.44444443444.55543222666666665555 PP

>> PF04246.7  Positive regulator of sigma(E), RseC/MucC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   1.4      0.13   4.6e+02      81     105 ..     134     158 ..      96     174 .. 0.60
   2 ?   10.8   0.3   7.2e-05      0.25      50     111 ..     181     246 ..     171     249 .] 0.79

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.13
   PF04246.7  81 alllgallgqalllsellaallgll 105
                 + ++++ l+qa+ +++ + ++++l 
  MMETSP1325-20131115|9930_1 134 LAMAAVTLAQACVNKDTWFFVTCLQ 158
                 3345555555555555555555555 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 7.2e-05
   PF04246.7  50 lglkvGdeVevglpesallka..allvYllPLlalllgallgqallls..ellaallgllglllgf 111
                 ++l+ ++ Ve + +e++++++  ++++++  +l+++++++lg+al+l   + +a   +l+g+++ +
  MMETSP1325-20131115|9930_1 181 ANLEKNQGVEAADKERNVINSqgTFWMFATEVLTIIVVYGLGTALGLGnvDTAALGQALIGVFIFV 246
                 678889999999999999965338999999******************886666666666665543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       740  (0.0541252); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.54
# Mc/sec: 1104.99
//
Query:       MMETSP1325-20131115|9933_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.2   1.8      0.083   12.0   1.2    1.2  1  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.2     6e-06     0.083     231     284 ..      35      86 ..       5     108 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6e-06
                 XXXXXXXXXXXX........XXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXX CS
  PF01213.14 231 aaPppPpppppPsvdtikdsvesaksdskgslgavFaelnkGeeitkgLkkvdd 284
                 + P + p+ ++P + +  ++ esa +    +lg++ a ln+ ee+t  L     
  MMETSP1325-20131115|9933_1  35 TPPSATPTIATPAAAIAAKTAESALK--TAGLGNLSASLNRSEEVTLRLADTAS 86 
                 22223355555655554444444444..799***************88866555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 663.99
//
Query:       MMETSP1325-20131115|9935_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.8   0.1       0.05   13.6   0.1    1.2  1  PF00595.19 PDZ domain (Also known as DHR or GLGF)


Domain annotation for each model (and alignments):
>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   3.6e-06      0.05      30      62 ..      17      50 ..       5      66 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.6e-06
                EESTTTHHTTTTSBSTTCEEEEETT.EBGTTSHH CS
  PF00595.19 30 sevvpggaaeagglkeGDkIlsvNg.vdvenvsh 62
                 +++++ga  a+g+++GD +++v+  +++++v++
  MMETSP1325-20131115|9935_1 17 LRILAMGASGAKGIEIGDELVRVDRdQHTTDVRV 50
                5788898888888***********9877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 275.58
//
Query:       MMETSP1325-20131115|9934_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0015   18.2   0.2     0.0015   18.1   0.1    1.1  1  PF06964.7 Alpha-L-arabinofuranosidase C-terminus


Domain annotation for each model (and alignments):
>> PF06964.7  Alpha-L-arabinofuranosidase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1   1.1e-07    0.0015      69     149 ..      10      98 ..       1     123 [. 0.84

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 1.1e-07
                 EEE-CCHHHHHHHHHGTT-EEE.........ESEEEEEEEETTTTEEEEEEEE-.-S-EEEEEEECTSTT--EEEEEEEE-S-TT-B--S CS
                 xxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF06964.7  69 avltpsYyvqklfstnrgdtvl.........ppldvvatrdeeggelilkvvNansedvtvevdleglkkassaeltvLtgddpkaentf 149
                  v+t+ +y + lf+   gdt++         +++++ a++ ++g e+ + vvN  s+++t+++d    + a +a+ +++++++p+a   +
  MMETSP1325-20131115|9934_1  10 GVPTTQFYSYALFNLAFGDTMVnstisqgnsTKIKTYASTFQNG-EVGVVVVNEDSTAHTIRLDGVATSGAVTANGWIVASSEPDADDPL 98 
                 589****************************99******99999.799999999766777666665555599***********9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 642.22
//
Query:       MMETSP1325-20131115|9932_1  [L=372]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1591.87
//
Query:       MMETSP1325-20131115|9931_1  [L=544]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-91  305.8   1.4    1.7e-88  296.9   0.5    2.6  2  PF05577.7 Serine carboxypeptidase S28
    0.00049   19.9   0.6     0.0017   18.1   0.2    1.7  1  PF12697.2 Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF05577.7  Serine carboxypeptidase S28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.9   0.5   2.5e-92   1.7e-88       3     398 ..      50     476 ..      48     481 .. 0.80
   2 !    6.3   0.0   0.00041       2.8     392     422 ..     490     518 ..     487     525 .. 0.81

  Alignments for each domain:
  == domain 1    score: 296.9 bits;  conditional E-value: 2.5e-92
   PF05577.7   3 lDhFdasnk...rtfqqryfvndqytkng.gpifLyiGgegsesassvrngeilklAkefgAlvlslEHRfYGqSkPvkdlstanlrylsseqalaDvasfikalkqkfklsss...............skwivfGgSYsgsLaawaRkkyPelvvgavaSSaPllakvdfkeylevveeslaktag....ecakavekgfaeveellktkegrqal....seelqlcskldektdkdikkffsniaaefqgvvqysydgkanaalsalsikelCkllsnaskt..dlilrvevli.qlfkslnqk..slnlstadisyqlavaekkdssge..laddrqWlyqtCtEfGfyqttdseaqlf.gskvpa..slfidlCedvFg....asanskkvklrvkatnskYGgadnysatnvvfvnGalDPWhalgltkstd 398
                 +DhFd+s++   + ++qry+  + ++  +  pifLyiGgeg++sa   r   ++klA+e++Alv+ lEHR+YG+S Pv+d+st+nl+yl+seqalaD+a fi+++++  +++++               skw+ fGgSY+g La+w++ kyP lv+g v+SSaP++a++d+++y++v+   +    +    +c+k ++k++a++e l+++  g+        ++l++cs +d++   d+ +  ++++++fqg vqy+   +      + +++ lC+++ n +++      +++++    ++ ++++  s++++++ i++  a+++ +  + +  ++++rqW+yq C+EfG++qtt +  q+f g k++   +   ++C + Fg     ++n  k +++  + n  YGg   +++tn+ ++nG+ DPWhal++ ++td
  MMETSP1325-20131115|9931_1  50 VDHFDDSATapiAKWSQRYYSDASFWGGEgYPIFLYIGGEGPQSAPTDRLL-MYKLAEEHQALVVALEHRYYGESYPVPDMSTPNLKYLTSEQALADLARFIQYVSAAGNGDADtlsspplelpasamaSKWVSFGGSYPGNLATWLKLKYPSLVAGTVGSSAPVFAEYDYYQYAQVTGFAMGYPLIggsdQCYKTIDKATADLEALVLSTPGAYGSssaiPDALKPCSAMDND--LDLSTYEAELFGNFQGTVQYNLQSA------GPTVELLCDTMANVTDNggSALEAFAAATaIFYEGVEGAciSSSFQKDYIDMYMANTSFSGLGCDldCTSTRQWIYQSCNEFGYFQTTTGTDQPFaGFKFANieTAGKQVCVQGFGipdsVDYNGPKSNAKGPVANTRYGG-RAVEGTNITMPNGNCDPWHALSVVNKTD 476
                 7******9844458***********998769*************9988877.*****************************************************98888765433333333333333379**********************************************986654332233547*****************9998743322248999999999995..777776699***********44333......56899*******988776544445555540555667777544667777777777777777766445699******************9996666523444431144459******8443346777777888889999****.99********************999886 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.00041
   PF05577.7 392 gltkstdssvvpllikgaahcaDmypasssd 422
                 g++++++ s+v   i+g+ahc Dmy   + +
  MMETSP1325-20131115|9931_1 490 GVQTTSGTSIVE--IDGTAHCRDMYAPGAFE 518
                 678888889988..8*********9876655 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.2   2.5e-07    0.0017      18     103 ..     101     215 ..      87     258 .. 0.79

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 2.5e-07
                 HHHHT..TTSEEEEE-----------S........S--HHHHHHHHHHHHHH--............--E............EEE--------HHHHHH----.EEEEEEE------ CS
   PF12697.2  18 aeaLa..agyrvvapDlpGhGrSdrppd.....ydpdtledlaadlaalldalgl...........rpv............vlvGHSlGgavalaaaarrpdlvrglvlidppgpl 103
                 +  La  +   vva++ + +G+S + pd       + t e+ +adla++++ + +           + +            v +G S+ g +a+ +  ++p+lv+g v  ++p++ 
  MMETSP1325-20131115|9931_1 101 MYKLAeeHQALVVALEHRYYGESYPVPDmstpnLKYLTSEQALADLARFIQYVSAagngdadtlssP-PlelpasamaskwVSFGGSYPGNLATWLKLKYPSLVAGTVGSSAPVFA 215
                 556763345559************999976666666777999******9999888888777666661.1466666666666***************************99999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.37s 00:00:01.25 Elapsed: 00:00:00.52
# Mc/sec: 2506.96
//
Query:       MMETSP1325-20131115|9939_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 584.71
//
Query:       MMETSP1325-20131115|9940_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       78  (0.00570509); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|9941_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.46
# Mc/sec: 390.71
//
Query:       MMETSP1325-20131115|9936_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-63  213.2   0.4    1.5e-63  212.9   0.3    1.1  1  PF00071.17 Ras family
    9.4e-22   77.6   0.0    1.9e-21   76.6   0.0    1.5  2  PF08477.8  Miro-like protein
    1.9e-17   62.9   0.1    2.6e-17   62.5   0.1    1.1  1  PF00025.16 ADP-ribosylation factor family
    4.6e-07   29.1   0.2    6.2e-07   28.6   0.1    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    1.6e-06   27.5   0.1    4.2e-06   26.2   0.0    1.6  2  PF00009.22 Elongation factor Tu GTP binding domain
     0.0021   17.1   0.1     0.0025   16.9   0.0    1.2  1  PF09439.5  Signal recognition particle receptor beta subunit
     0.0082   16.1   0.0      0.017   15.1   0.0    1.7  1  PF13401.1  AAA domain
  ------ inclusion threshold ------
      0.072   13.1   0.0       0.26   11.3   0.0    1.9  2  PF00004.24 ATPase family associated with various cellular activities (AAA)


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.9   0.3   8.5e-67   1.5e-63       1     161 [.      42     202 ..      42     203 .. 0.98

  Alignments for each domain:
  == domain 1    score: 212.9 bits;  conditional E-value: 8.5e-67
                 EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHHH CS
  PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 Kl+++Gds+vGKt+lllr+ +d+F+ ++++Tig+df++k+ie+dgk++kl+iwDTAGqe+f++++++y+r+a+gillvyd+t+r sf+++++wv +i+++a+ +v+ +L+GnK+D++++r+vs+eege+lake+++kf+etSAk++ +v++ f +++ e++
  MMETSP1325-20131115|9936_1  42 KLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRGSFNSIRNWVGQIQQHADVHVNKILIGNKCDIDDQRMVSKEEGEKLAKEYDIKFFETSAKQDFQVDSGFVTIAGEVK 202
                 89****************************************************************************************************99***************************************************998875 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.6   0.0   1.1e-24   1.9e-21       1     119 []      42     156 ..      42     156 .. 0.95
   2 ?   -2.7   0.0       4.1     7e+03      28      50 ..     178     200 ..     166     237 .. 0.61

  Alignments for each domain:
  == domain 1    score: 76.6 bits;  conditional E-value: 1.1e-24
   PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                 k++ +Gd+gvGK+ ll +++ ++f+   +   ++g +  +k +e+d+++ +l++wd++g+e++       ++ a++illvyd+td+ s++++++ + ++++ ++  ++++ il+gnk+D
  MMETSP1325-20131115|9936_1  42 KLLMIGDSGVGKTCLLLRYANDSFS--PTFITTIGIDFKIKNIELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRGSFNSIRNWVGQIQQHAD--VHVNKILIGNKCD 156
                 7789*********************..88999999999999************************87888**********************999999999985..89**********9 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 4.1
   PF08477.8  28 klpeeikgdtlavktlevdvdte 50 
                 k  e + +++ +v++ +v +++e
  MMETSP1325-20131115|9936_1 178 KFFETSAKQDFQVDSGFVTIAGE 200
                 45555555555555555555544 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5   0.1   1.5e-20   2.6e-17      10     147 ..      36     184 ..      29     205 .. 0.78

  Alignments for each domain:
  == domain 1    score: 62.5 bits;  conditional E-value: 1.5e-20
                 -.TSEEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT-..--HHHHHHHTTTTTST...... CS
  PF00025.16  10 lkkkelrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpea..lseeelrellgleelk.....g 147
                   ++++++l++G  + GKt +l ++ +++++   + Tig  f+++++e   k +k+++wD  Gqe+ R +  +Yf+  ++++ v D++dr  +++ ++ + ++ ++ +++  ++l ++NK D+ ++  +s+ee ++l + +++k     +
  MMETSP1325-20131115|9936_1  36 PFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPtFITTIGidFKIKNIELdgKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRGSFNSIRNWVGQIQQHADVHVNKIL-IGNKCDIDDQrmVSKEEGEKLAKEYDIKffetsA 184
                 44789************************986256666533889988876699*************************************************9999998766655.69**998764215555555555555555333333 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.1   3.6e-10   6.2e-07       1     158 [.      42     183 ..      42     191 .. 0.69

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 3.6e-10
   PF04670.7   1 klLLmGksgsGKtSmr.siiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspeakvfvli.hKmDlisedereeifeerkeeireeiedleieeleffaTS 158
                 klL++G sg GKt++      + ++++ ++++g+  ++++ ++   + +kl++wD+ Gqe+f + +     ++ f+  + ++ V D++  + + ++++ ++ + +++q+       +li +K D i  d ++ + +e  e++++e   ++   ++ff+TS
  MMETSP1325-20131115|9936_1  42 KLLMIGDSGVGKTCLLlRYANDSFSPTFITTIGIDFKIKNIELD-GKRIKLQIWDTAGQERFRTIT-----TSYFRGAQGILLVYDVT--D-RGSFNSIRNWVGQIQQHADVHVNKILIgNKCD-I--DDQRMVSKEEGEKLAKE---YD---IKFFETS 183
                 89************752556677888888888888888888886.667***********9999885.....799**************..3.44555555555555555555555556645666.3..33333333333333332...22...5555555 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.98   1.7e+03       5      20 ..      42      57 ..      40      64 .. 0.83
   2 !   26.2   0.0   2.4e-09   4.2e-06      53     176 ..      74     191 ..      71     227 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.98
                EEEEEESTT---HHHH CS
  PF00009.22  5 nigiighvDhGKtTlt 20
                 + +ig+   GKt+l+
  MMETSP1325-20131115|9936_1 42 KLLMIGDSGVGKTCLL 57
                5789999******997 PP

  == domain 2    score: 26.2 bits;  conditional E-value: 2.4e-09
                 --BBSSEEEEEET.ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.S-HHHHHHH...HHHHHTT--EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHH CS
  PF00009.22  53 giTiksaaisleketkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqTeevl...rlakklgvkiivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegid 176
                 gi  k+++i+l+  +k+ ++++ Dt G + F   +++  r + g +lv d+++    +  ++ +   ++  +++v+ i++ NK+D  ++++  + +e  ekl ++y      +++++ +Sa++ +++d
  MMETSP1325-20131115|9936_1  74 GIDFKIKNIELD--GKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRgSFNSIRNWVgqiQQHADVHVNKILIGNKCDIDDQRM--VSKEEGEKLAKEY------DIKFFETSAKQDFQVD 191
                 677899999999..*************************************9863444444443111555567899*********987665..4555555676666......4668888888888776 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.5e-06    0.0025       5      86 ..      42     123 ..      38     192 .. 0.73

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.5e-06
                 EEEEE--TT---HHHHHHHHHSS-------S.S-EEETT-.....-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETT CS
   PF09439.5   5 avllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv..ksekgkkltliDfPGheklrqklleklkaksslkglvfvvDSt 86 
                 ++l++G s  GKT l+ r  +ds+ +t +      +  k    + k  kl++ D  G+e++r+  +    + + ++g++ v D t
  MMETSP1325-20131115|9936_1  42 KLLMIGDSGVGKTCLLLRYANDSFSPTFITTiGIDFKIKNieLDGKRIKLQIWDTAGQERFRTITTS---YFRGAQGILLVYDVT 123
                 689***********************987764444444432346677889999*********85444...577888999888866 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   9.7e-06     0.017       8      28 ..      44      64 ..      42     159 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 9.7e-06
   PF13401.1  8 vvtGesGvGKTtllrrlarql 28
                + +G sGvGKT+ll r+a++ 
  MMETSP1325-20131115|9936_1 44 LMIGDSGVGKTCLLLRYANDS 64
                679***************975 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00015      0.26       1      64 [.      43     119 ..      43     149 .. 0.79
   2 ?   -0.9   0.0      0.88   1.5e+03      17      35 ..     170     188 ..     168     221 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00015
                 EEEE-------HHHHHHHHHHC.............THEEEEEECCSSS.SST-HHHHHHHHHHHHHHHHTS-SEEEEE CS
  PF00004.24   1 vllyGppGtGKTllakavakel.............gvefleisgsell.skyvgesekkirelfkeakekakpsilfi 64 
                 +l++G  G+GKT l    a+++             +++ +e++g+++  + +  ++++++r + ++  + a + il++
  MMETSP1325-20131115|9936_1  43 LLMIGDSGVGKTCLLLRYANDSfsptfittigidfKIKNIELDGKRIKlQIWDTAGQERFRTITTSYFRGA-QGILLV 119
                 689******************54444444444444677888888888866688889999999988888777.677765 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.88
                 HHHHHCTHEEEEEECCSSS CS
  PF00004.24  17 avakelgvefleisgsell 35 
                  +ake +++f+e+s+++ +
  MMETSP1325-20131115|9936_1 170 KLAKEYDIKFFETSAKQDF 188
                 6899999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       601  (0.0439585); expected 273.4 (0.02)
Passed bias filter:                      421  (0.0307929); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 1288.04
//
Query:       MMETSP1325-20131115|9942_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 1146.49
//
Query:       MMETSP1325-20131115|9944_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 366.50
//
Query:       MMETSP1325-20131115|9943_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-05   22.9   0.0    5.3e-05   22.5   0.0    1.2  1  PF00644.15 Poly(ADP-ribose) polymerase catalytic domain


Domain annotation for each model (and alignments):
>> PF00644.15  Poly(ADP-ribose) polymerase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   3.9e-09   5.3e-05     105     203 ..       4     100 ..       1     102 [. 0.81

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 3.9e-09
                 HHHGGG---SSS----EEEEEEE---EEE-SS--T-SS------EEE----EEEGG.EE---..E----E.EE----S-S.....-SB--EEESSGGGEEEEEEEEE CS
  PF00644.15 105 kSanYcktseangeglllLaeValGdikeltkadylekakkgkksvkgkgktepesivekdg..vPlgks.satkyesse.....leyneyvvydkeqvrlkYLlev 203
                 +S +Y ++  +   + +l ++V+ G+    +++ yl +++  k+ + ++gk  +     + g  +P + +  +t y+s++      +++++v y+++q++ +Y++++
  MMETSP1325-20131115|9943_1   4 YSESYAQA-PDGDIRSMLACRVLAGE----YTKGYLYNPELTKDQIRASGKPPE-----ELGivPPIRLKkTQTPYDSTTngkggGTPDMFVTYHDSQAYAEYIVDF 100
                 56666665.3445677**********....9999*****************999.....667754444444677777777888899******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.99
# Mc/sec: 474.43
//
Query:       MMETSP1325-20131115|9945_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 167.29
//
Query:       MMETSP1325-20131115|9946_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-20   70.8  10.8    1.2e-13   50.3   2.1    2.6  3  PF13414.1  TPR repeat
    2.4e-10   39.4   7.4    1.4e-05   24.3   0.3    3.8  4  PF00515.23 Tetratricopeptide repeat
    4.8e-08   32.2  14.5      0.011   15.4   0.2    4.5  5  PF07719.12 Tetratricopeptide repeat
    5.6e-06   26.7   4.0    0.00013   22.3   0.5    3.2  3  PF13432.1  Tetratricopeptide repeat
    4.2e-05   22.8   2.5        1.1    9.1   0.0    3.8  4  PF13181.1  Tetratricopeptide repeat
    8.6e-05   22.2   2.3     0.0018   17.9   0.1    3.0  2  PF13371.1  Tetratricopeptide repeat
    0.00021   21.1   1.4      0.036   14.1   0.1    3.0  2  PF13431.1  Tetratricopeptide repeat
     0.0019   18.0   5.5     0.0028   17.4   3.8    1.2  1  PF11208.3  Protein of unknown function (DUF2992)
     0.0025   17.4   1.0     0.0025   17.4   0.7    1.6  2  PF04534.7  Herpesvirus UL56 protein
  ------ inclusion threshold ------
      0.024   14.4   0.4      0.024   14.4   0.3    2.7  2  PF13424.1  Tetratricopeptide repeat
      0.032   13.9   0.3          1    9.1   0.0    3.1  3  PF13176.1  Tetratricopeptide repeat
      0.039   13.4   0.3       0.78    9.3   0.0    2.8  2  PF07849.6  Protein of unknown function (DUF1641)
      0.056   13.4   2.9        0.1   12.6   2.0    1.5  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
       0.46   11.1  10.2       0.83   10.3   0.0    3.7  3  PF13428.1  Tetratricopeptide repeat
       0.81   10.2   6.4        1.8    9.1   4.5    1.6  1  PF05318.7  Tombusvirus movement protein
        1.1    7.8   5.6        1.4    7.4   3.9    1.1  1  PF11917.3  Protein of unknown function (DUF3435)


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   2.1   1.4e-16   1.2e-13       2      69 .]      36     101 ..      35     101 .. 0.96
   2 !   32.4   0.7   5.4e-11   4.6e-08      22      68 ..      89     134 ..      88     135 .. 0.96
   3 ?   -2.9   0.3       5.9     5e+03      10      21 ..     178     189 ..     172     194 .. 0.48

  Alignments for each domain:
  == domain 1    score: 50.3 bits;  conditional E-value: 1.4e-16
   PF13414.1   2 nAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                 +A ++k ++  + + gdy++A+++y+ Al+ +p +a  y+n+A ++lk+  ++ +Al+d++ A+el+P
  MMETSP1325-20131115|9946_1  36 KAGEHKMAAGDAKSSGDYAKAVDEYTAALACSP-SALTYANRADCLLKMK-RPCAALADCNAAIELNP 101
                 78899****************************.9**************6.8**************99 PP

  == domain 2    score: 32.4 bits;  conditional E-value: 5.4e-11
   PF13414.1  22 AieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleld 68 
                 A++ ++ A+el+p++a+++  ++++ + lgk +e+A +d+ kA+++d
  MMETSP1325-20131115|9946_1  89 ALADCNAAIELNPDSAKALKIRGKCNRYLGK-WEAAQTDLAKAMSID 134
                 999***************************6.7***********997 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 5.9
   PF13414.1  10 Gnalfkegdyde 21 
                 +n++ +++  + 
  MMETSP1325-20131115|9946_1 178 ANEAARKKAQEA 189
                 444444433333 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       4.5   3.8e+03      15      20 ..      32      37 ..      31      40 .. 0.77
   2 ?    5.8   0.0     0.012        10      14      32 ..      50      68 ..      47      69 .. 0.87
   3 !   24.3   0.3   1.6e-08   1.4e-05       1      33 [.      70     102 ..      70     103 .. 0.95
   4 !   11.5   0.1   0.00018      0.16       1      31 [.     104     134 ..     104     136 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 4.5
                T-HHHH CS
  PF00515.23 15 gkydeA 20
                g++++A
  MMETSP1325-20131115|9946_1 32 GDFEKA 37
                889998 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.012
                TT-HHHHHHHHHHHHHHHT CS
  PF00515.23 14 lgkydeAleyyekALelnP 32
                 g+y +A++ y  AL   P
  MMETSP1325-20131115|9946_1 50 SGDYAKAVDEYTAALACSP 68
                69*************8777 PP

  == domain 3    score: 24.3 bits;  conditional E-value: 1.6e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALelnPn 33 
                 a ++ n++ ++lk++++  Al++++ A+elnP+
  MMETSP1325-20131115|9946_1  70 ALTYANRADCLLKMKRPCAALADCNAAIELNPD 102
                 678*****************************8 PP

  == domain 4    score: 11.5 bits;  conditional E-value: 0.00018
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
  PF00515.23   1 akalynlGnaylklgkydeAleyyekALeln 31 
                 akal+ +G + ++lgk++ A  +  kA +++
  MMETSP1325-20131115|9946_1 104 AKALKIRGKCNRYLGKWEAAQTDLAKAMSID 134
                 89**********************9998887 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       4.1   3.5e+03      14      21 ..      31      38 ..      30      40 .. 0.76
   2 !   11.6   0.1   0.00022      0.19      13      33 ..      49      69 ..      37      70 .. 0.88
   3 !   15.4   0.2   1.3e-05     0.011       1      33 [.      70     102 ..      70     103 .. 0.94
   4 !   13.6   0.0   4.8e-05     0.041       1      31 [.     104     134 ..     104     137 .. 0.93
   5 ?   -2.9   1.3       9.1   7.8e+03      18      29 ..     180     191 ..     176     195 .. 0.77

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 4.1
                TT-HHHHH CS
  PF07719.12 14 lgdyeeAl 21
                +gd+e+A 
  MMETSP1325-20131115|9946_1 31 SGDFEKAG 38
                58999995 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00022
                HTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12 13 klgdyeeAleafekAleldPn 33
                 +gdy++A++ +  Al+  P 
  MMETSP1325-20131115|9946_1 49 SSGDYAKAVDEYTAALACSPS 69
                58***************9995 PP

  == domain 3    score: 15.4 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 a  + n++++++k++++  Al++++ A+el+P+
  MMETSP1325-20131115|9946_1  70 ALTYANRADCLLKMKRPCAALADCNAAIELNPD 102
                 56799***************************8 PP

  == domain 4    score: 13.6 bits;  conditional E-value: 4.8e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH- CS
  PF07719.12   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a+al  +G++ ++lg++e A  ++ kA ++d
  MMETSP1325-20131115|9946_1 104 AKALKIRGKCNRYLGKWEAAQTDLAKAMSID 134
                 789999*********************9987 PP

  == domain 5    score: -2.9 bits;  conditional E-value: 9.1
                 HHHHHHHHHHHH CS
  PF07719.12  18 eeAleafekAle 29 
                 e A++  ++A +
  MMETSP1325-20131115|9946_1 180 EAARKKAQEAAK 191
                 568888888876 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.5   1.5e-07   0.00013       4      65 .]      44     104 ..      42     104 .. 0.94
   2 !   12.7   0.1   0.00017      0.14      15      57 ..      88     131 ..      88     140 .. 0.86
   3 ?   -1.9   2.2       6.1   5.2e+03      41      54 ..     180     193 ..     170     204 .. 0.48

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 1.5e-07
   PF13432.1   4 ArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaPddp 65 
                 A ++  +Gdy++A++ + aala  P  a  + ++a++ll+++r+ +A+a  +aa++l+Pd++
  MMETSP1325-20131115|9946_1  44 AGDAKSSGDYAKAVDEYTAALACSP-SALTYANRADCLLKMKRPCAALADCNAAIELNPDSA 104
                 6677789******************.9********************************986 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 0.00017
   PF13432.1  15 eAlaaleaalalaPeaaeallllaeallrlgrldeAa.allraa 57 
                 +Ala  +aa++l+P+ a al  ++ +   lg++++A   l +a+
  MMETSP1325-20131115|9946_1  88 AALADCNAAIELNPDSAKALKIRGKCNRYLGKWEAAQtDLAKAM 131
                 6999********************************97776665 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 6.1
   PF13432.1  41 llrlgrldeAaall 54 
                  +++++ +eAa+  
  MMETSP1325-20131115|9946_1 180 EAARKKAQEAAKRE 193
                 33333333333333 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       9.1   7.7e+03      15      20 ..      32      37 ..      31      40 .. 0.79
   2 ?    2.7   0.0      0.14   1.2e+02      13      32 ..      49      68 ..      47      71 .. 0.85
   3 !    9.0   0.0    0.0014       1.2       3      33 ..      72     102 ..      70     103 .. 0.94
   4 !    9.1   0.0    0.0012       1.1       2      31 ..     105     134 ..     104     137 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 9.1
                T-HHHH CS
   PF13181.1 15 GdydkA 20
                Gd++kA
  MMETSP1325-20131115|9946_1 32 GDFEKA 37
                899999 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.14
                HTT-HHHHHHHHH---HHHH CS
   PF13181.1 13 qlGdydkAkeylekalelkp 32
                + Gdy kA   +  al  +p
  MMETSP1325-20131115|9946_1 49 SSGDYAKAVDEYTAALACSP 68
                67*********999997776 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.0014
                 -TTT---HHHHTT-HHHHHHHHH---HHHH. CS
   PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkpr 33 
                 +y n++d+++++++  +A++  + a+el+p+
  MMETSP1325-20131115|9946_1  72 TYANRADCLLKMKRPCAALADCNAAIELNPD 102
                 699**************************96 PP

  == domain 4    score: 9.1 bits;  conditional E-value: 0.0012
                 --TTT---HHHHTT-HHHHHHHHH---HHH CS
   PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelk 31 
                 ka+  +G++ r lG++++A   l ka +++
  MMETSP1325-20131115|9946_1 105 KALKIRGKCNRYLGKWEAAQTDLAKAMSID 134
                 677789********************9987 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1      0.18   1.6e+02      42      63 ..      50      71 ..      47      83 .. 0.82
   2 !   17.9   0.1   2.1e-06    0.0018       9      59 ..      84     134 ..      79     145 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.18
   PF13371.1 42 lgclaaAaedLeaflelcpdap 63
                 g++a A+++++a+l+ +p+a 
  MMETSP1325-20131115|9946_1 50 SGDYAKAVDEYTAALACSPSAL 71
                5899999999999999888664 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 2.1e-06
   PF13371.1   9 edferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelc 59 
                 +++ +ALa ++  ++l+Pd++  +  rG +   lg ++aA +dL  ++  +
  MMETSP1325-20131115|9946_1  84 KRPCAALADCNAAIELNPDSAKALKIRGKCNRYLGKWEAAQTDLAKAMSID 134
                 56679***************************************9988443 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.041        35       2      27 ..      60      84 ..      59      86 .. 0.86
   2 !   14.1   0.1   4.2e-05     0.036       2      33 ..      93     124 ..      92     125 .. 0.95

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.041
   PF13431.1  2 yekaleldPnnadaynnLAelllnnG 27
                y  al+++P +a  y n+A +ll+ +
  MMETSP1325-20131115|9946_1 60 YTAALACSP-SALTYANRADCLLKMK 84
                899999999.5*********999765 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 4.2e-05
   PF13431.1   2 yekaleldPnnadaynnLAelllnnGdleeAe 33 
                 ++ a+el+P++a a+  ++++   +G++e A+
  MMETSP1325-20131115|9946_1  93 CNAAIELNPDSAKALKIRGKCNRYLGKWEAAQ 124
                 689**************************997 PP

>> PF11208.3  Protein of unknown function (DUF2992)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   3.8   3.3e-06    0.0028      32     100 ..     136     199 ..     116     203 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 3.3e-06
   PF11208.3  32 ePkdeeilefilkklselkfteavkvkkkkekkknpKrlqRevkkevkkkkvstkAqealklelekkkk 100
                  P+++e+l+f++ k+ +++  +++k  k +ek+ + K ++R+++ e+ +     kAqea k e+e++++
  MMETSP1325-20131115|9946_1 136 DPDMQELLKFVQGKFAAIQGKATKKRLK-EEKEAKKKIAERKAANEAAR----KKAQEAAKREQEEQRR 199
                 7*****************9988888777.88888888889998887776....8999999999998765 PP

>> PF04534.7  Herpesvirus UL56 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       4.6   3.9e+03      60      84 ..      22      46 ..      11      74 .. 0.68
   2 !   17.4   0.7     3e-06    0.0025      72     140 ..     168     239 ..     158     258 .. 0.68

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 4.6
   PF04534.7 60 gpvrPassgdgevsergrsrraaqr 84
                 p  P+  g g+  + g  + aa  
  MMETSP1325-20131115|9946_1 22 FPAMPSGEGSGDFEKAGEHKMAAGD 46
                5566666677776666666666644 PP

  == domain 2    score: 17.4 bits;  conditional E-value: 3e-06
   PF04534.7  72 vsergrsrraaqraarrarrraerr....arrrsfgagglfvstPlflPetrlaappdvrsdlvsglatyaea 140
                 + ++   r+aa  aar+  + a +r     rr + + gg++   P ++P+  +   p++++ ++ g+a+ ++ 
  MMETSP1325-20131115|9946_1 168 AKKKIAERKAANEAARKKAQEAAKReqeeQRRAAAAGGGMPGGMPGGMPG-GMPGMPGMGGGMPAGMAGMMND 239
                 55555556666666666555555542220455555667899999*****9.5566789999999999987764 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.4    0.0016       1.4      16      76 ..      48     100 ..      40     102 .. 0.82
   2 ?   14.4   0.3   2.8e-05     0.024       7      75 ..      72     133 ..      68     136 .. 0.93

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0016
   PF13424.1  16 rrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                 +  gdy +A + y  al+        +p  a ++ n a+++l++++  +Al+  + A+e+ 
  MMETSP1325-20131115|9946_1  48 KSSGDYAKAVDEYTAALAC-------SPS-ALTYANRADCLLKMKRPCAALADCNAAIELN 100
                 5679999999999999976.......687.9999999999999999999998888888775 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.8e-05
   PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                 ++ n a++l+++++   Al+ ++ a+el       +pd a+al   + + ++lg+ ++A   l kA+ i
  MMETSP1325-20131115|9946_1  72 TYANRADCLLKMKRPCAALADCNAAIEL-------NPDSAKALKIRGKCNRYLGKWEAAQTDLAKAMSI 133
                 788***********************98.......6999***************************987 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       3.7   3.1e+03      12      18 ..      31      37 ..      30      40 .. 0.84
   2 ?    9.1   0.0    0.0012         1      11      28 ..      49      66 ..      43      74 .. 0.86
   3 ?    0.5   0.0       0.7     6e+02      11      26 ..     116     131 ..     110     138 .. 0.72

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 3.7
   PF13176.1 12 lgdyekA 18
                +gd+ekA
  MMETSP1325-20131115|9946_1 31 SGDFEKA 37
                69****9 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.0012
   PF13176.1 11 rlgdyekAielyeraLal 28
                ++gdy kA++ y++aLa 
  MMETSP1325-20131115|9946_1 49 SSGDYAKAVDEYTAALAC 66
                68************8875 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.7
   PF13176.1  11 rlgdyekAielyeraL 26 
                  lg++e A + + +a+
  MMETSP1325-20131115|9946_1 116 YLGKWEAAQTDLAKAM 131
                 4899999988777744 PP

>> PF07849.6  Protein of unknown function (DUF1641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.35     3e+02      22      31 ..     136     145 ..     125     146 .. 0.71
   2 ?    9.3   0.0   0.00091      0.78      15      29 ..     232     246 ..     230     247 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.35
   PF07849.6  22 DPDVqrgLGf 31 
                 DPD+q  L f
  MMETSP1325-20131115|9946_1 136 DPDMQELLKF 145
                 9***988766 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00091
   PF07849.6  15 gLlkaLkDPDVqrgL 29 
                 g+ ++++DP+V +gL
  MMETSP1325-20131115|9946_1 232 GMAGMMNDPEVVAGL 246
                 899********8887 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.0   0.00012       0.1       3      83 ..      51     129 ..      49     130 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00012
                 T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHH CS
   PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLek 83 
                 ++y +A+  +  +la sp+   +  + + A cl++++++ +A+  ++   el++ s+++  + ++c   lgk++ A++ L k
  MMETSP1325-20131115|9946_1  51 GDYAKAVDEYTAALACSPS---ALTYANRADCLLKMKRPCAALADCNAaIELNPDSAKALKIRGKCNRYLGKWEAAQTDLAK 129
                 5677777778888888873...4566669*****************88999999998888888**************99887 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00097      0.83      10      37 ..      46      73 ..      37      79 .. 0.80
   2 ?    7.0   0.1     0.011       9.2       3      39 ..      72     108 ..      70     113 .. 0.86
   3 ?   -0.8   0.0       3.7   3.2e+03      14      29 ..     117     132 ..     107     145 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00097
   PF13428.1 10 allalGdpdeAiallrralalaPddaea 37
                    +Gd+++A++ + +ala +P+ +++
  MMETSP1325-20131115|9946_1 46 DAKSSGDYAKAVDEYTAALACSPSALTY 73
                56679*****************996654 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.011
   PF13428.1   3 allalarallalGdpdeAiallrralalaPddaeall 39 
                 +++ +a+ ll + +p +A+a +++a++l+Pd+a al+
  MMETSP1325-20131115|9946_1  72 TYANRADCLLKMKRPCAALADCNAAIELNPDSAKALK 108
                 57788999999999999****************9985 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 3.7
   PF13428.1  14 lGdpdeAiallrrala 29 
                 lG +++A   l +a +
  MMETSP1325-20131115|9946_1 117 LGKWEAAQTDLAKAMS 132
                 5666666666666644 PP

>> PF05318.7  Tombusvirus movement protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   4.5    0.0021       1.8      13      44 ..     156     188 ..     138     205 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0021
   PF05318.7  13 drtgkkkkagkrgkkk.akrsvAsdAvrkkres 44 
                 ++t k+ k +k  kkk a r+ A++A+rkk ++
  MMETSP1325-20131115|9946_1 156 KATKKRLKEEKEAKKKiAERKAANEAARKKAQE 188
                 7788888999999999************85444 PP

>> PF11917.3  Protein of unknown function (DUF3435)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   3.9    0.0017       1.4     243     348 ..      92     197 ..      81     202 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0017
   PF11917.3 243 dvqavvlglppqealiraatsmsrsiDprrPkeLtdeqkasveedpelqelkrkreelkkeleakygqvakakgtelyeelekakrevrnerqrlrrelkkkiree 348
                 d +a++   p   + +++ ++ +r   ++   +   ++  s++ dp++qel + ++   + ++ k+ + + ++++e+++++ ++k+  + +r+++++++k++  e+
  MMETSP1325-20131115|9946_1  92 DCNAAIELNPDSAKALKIRGKCNRYLGKWEAAQTDLAKAMSIDFDPDMQELLKFVQGKFAAIQGKATKKRLKEEKEAKKKIAERKAANEAARKKAQEAAKREQEEQ 197
                 7777777777788889999999999999999999999999****************9999999999999999999999****************999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1817  (0.132899); expected 273.4 (0.02)
Passed bias filter:                      981  (0.0717525); expected 273.4 (0.02)
Passed Vit filter:                       162  (0.011849); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.87u 0.46s 00:00:01.33 Elapsed: 00:00:00.67
# Mc/sec: 944.24
//
Query:       MMETSP1325-20131115|9952_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|9955_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 170.51
//
Query:       MMETSP1325-20131115|9954_1  [L=405]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-18   66.1   0.0    3.6e-18   65.6   0.0    1.2  1  PF03022.11 Major royal jelly protein
    8.1e-06   25.2   0.0     0.0048   16.1   0.0    3.9  3  PF08450.7  SMP-30/Gluconolaconase/LRE-like region
    0.00053   19.6   2.9         11    6.0   0.0    5.2  6  PF01436.16 NHL repeat
  ------ inclusion threshold ------
      0.082   12.5   4.6       0.74    9.5   0.5    3.6  5  PF06739.6  Beta-propeller repeat


Domain annotation for each model (and alignments):
>> PF03022.11  Major royal jelly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.0     1e-21   3.6e-18       4     259 ..     124     382 ..     121     394 .. 0.73

  Alignments for each domain:
  == domain 1    score: 65.6 bits;  conditional E-value: 1e-21
  PF03022.11   4 yriavDecdrLWvLDsGivnllqqlkqkcppkllvfDLk..tdkllkrvelpadvaksnsllaslvVdvaddtcddtfvYiaDakgk....gLiVYdladdkswRvesk.tfkpdpkfgkltiagesfqlkdGifglalspv..tedgrtlyFhplaStklysVptevLrneslaennasyeefkdlgdrgtqatakavdkngvlffglveesavvcwne.........skplkrenlkvvarneetlqfvsdlkideegkeelwvlsnrmqkf 259
                   ++vD+ d+LW+LD    +l +      +  l++f L+   d ll  +e+    a  +s l++l Vd+   ++   ++YiaD+ +     g +VYd+ ++ swR  ++    +  k+ +  +++e +++    + ++l+++  +++g  +y+ +++S +l+++pt +Lrn s+++ +   e ++ +  +   +++  +d++++++++ +e+sa+v+ +          +++ +++ l  +a++++ l ++++l+     ++ +++ ++ ++ f
  MMETSP1325-20131115|9954_1 124 LGLRVDKHDQLWLLDHAFFGLRK------RAALFAFTLAygADALLYEYEFDRHDAPYGSMLNDLQVDA---EG--RYIYIADESALahnpGFVVYDSLSKLSWRALESdVSVFMEKRLTIRVNEEPVRVFGLALKVNLDSIalDSKGEFMYYGAMSSGTLWRIPTVYLRNHSMSDIQ-REEYVELVSAKP-LSDGILIDDDNNVYVTAMEQSALVRIDDvaaraemdrQEKRSTRGLTLMAQSDRLLRWPDGLSFGP--DGDIYMTASALHLF 382
                 5789***************9999......588999999833567*************************...33..69*****98655556**************988744445556666666666666544433344444410445589************************9988.667777776665.99999*****************99865311111111022233334455667777777777777666..66666666666655 PP

>> PF08450.7  SMP-30/Gluconolaconase/LRE-like region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.065   2.2e+02      83     109 ..      65      91 ..      10      99 .. 0.66
   2 !   16.1   0.0   1.4e-06    0.0048      84     212 ..     175     330 ..     102     345 .. 0.62
   3 ?   -0.5   0.0      0.17   5.8e+02      81     105 ..     353     378 ..     331     394 .. 0.51

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.065
   PF08450.7  83 kplnrfNDgkvdpdGrlwfGtmgdeea 109
                   ++ +  ++v+p Gr++f+ + d  +
  MMETSP1325-20131115|9954_1  65 NLSHAPGNVAVSPSGRIFFTFHPDAPQ 91 
                 3677888999*********98877655 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 1.4e-06
   PF08450.7  84 plnrfNDgkvdpdGr.lwfGtmgdeeakgkev.......................galyrldpdgklervlddlti.sNGiawspdgktlYlaDsltrkiwafdvd....aeggelsnrrvfidlkkgegepDGlavDaeGnvwvAvwgggkvvridp 212
                     +ND++vd++Gr +++ + +   +++  v                          +r++++  +++    l++   +ia+++ g+ +Y+     +++w+++       + +++ +r+  ++l   +   DG+ +D ++nv+v+ ++++ +vrid 
  MMETSP1325-20131115|9954_1 175 YGSMLNDLQVDAEGRyIYIADESALAHNPGFVvydslsklswralesdvsvfmekRLTIRVNEE-PVRVFGLALKVnLDSIALDSKGEFMYYGAMSSGTLWRIPTVylrnHSMSDI-QREEYVELVSAKPLSDGILIDDDNNVYVTAMEQSALVRIDD 330
                 4556677777777776666666655555553366666666666666444444422222222222.1222222222213589999999*****888888888776531000222222.344455555555779***********************985 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.17
   PF08450.7  81 dekplnrfNDg.kvdpdGrlwfGtmg 105
                 + ++l+r+ Dg  + pdG ++++  +
  MMETSP1325-20131115|9954_1 353 QSDRLLRWPDGlSFGPDGDIYMTASA 378
                 22245555554235555555555544 PP

>> PF01436.16  NHL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.33   1.1e+03       7      16 ..      73      82 ..      70      82 .. 0.84
   2 !    6.0   0.0    0.0034        11       4      19 ..     123     138 ..     120     141 .. 0.90
   3 ?   -0.2   0.0      0.31     1e+03       6      19 ..     181     195 ..     178     200 .. 0.79
   4 ?   -3.2   0.0       2.7   9.4e+03       7      15 ..     254     262 ..     253     262 .. 0.83
   5 ?    4.3   0.3     0.012        40       6      18 ..     306     318 ..     305     318 .. 0.90
   6 ?    3.5   0.0     0.021        71       1      16 [.     358     373 ..     358     375 .. 0.94

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.33
                EEE-TT--EE CS
  PF01436.16  7 vavdsdGdvy 16
                vav+++G+++
  MMETSP1325-20131115|9954_1 73 VAVSPSGRIF 82
                9******996 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0034
                 BEEEEE-TT--EEEEE CS
  PF01436.16   4 PhGvavdsdGdvyVaD 19 
                 P G+ vd+ ++++  D
  MMETSP1325-20131115|9954_1 123 PLGLRVDKHDQLWLLD 138
                 9************999 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.31
                 EEEE-.TT--EEEEE CS
  PF01436.16   6 Gvavd.sdGdvyVaD 19 
                 ++ vd  +  +y+aD
  MMETSP1325-20131115|9954_1 181 DLQVDaEGRYIYIAD 195
                 778887777899999 PP

  == domain 4    score: -3.2 bits;  conditional E-value: 2.7
                 EEE-TT--E CS
  PF01436.16   7 vavdsdGdv 15 
                 +a+ds+G++
  MMETSP1325-20131115|9954_1 254 IALDSKGEF 262
                 89**99975 PP

  == domain 5    score: 4.3 bits;  conditional E-value: 0.012
                 EEEE-TT--EEEE CS
  PF01436.16   6 GvavdsdGdvyVa 18 
                 G+ +d+d++vyV+
  MMETSP1325-20131115|9954_1 306 GILIDDDNNVYVT 318
                 7779********8 PP

  == domain 6    score: 3.5 bits;  conditional E-value: 0.021
                 -SSBEEEEE-TT--EE CS
  PF01436.16   1 lnnPhGvavdsdGdvy 16 
                 l+ P G+   +dGd+y
  MMETSP1325-20131115|9954_1 358 LRWPDGLSFGPDGDIY 373
                 789************9 PP

>> PF06739.6  Beta-propeller repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.32   1.1e+03      15      27 ..      70      82 ..      60      84 .. 0.75
   2 ?   -2.0   0.0      0.86   2.9e+03      20      29 ..     184     194 ..     180     194 .. 0.80
   3 ?   -3.3   0.0       2.1   7.2e+03      17      24 ..     253     260 ..     252     260 .. 0.89
   4 ?    9.5   0.5   0.00022      0.74      17      29 ..     306     318 ..     304     320 .. 0.93
   5 ?    1.5   0.0     0.067   2.3e+02      22      37 ..     368     382 ..     360     383 .. 0.81

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.32
   PF06739.6 15 gngIavDsnGNiY 27
                + ++av ++G i+
  MMETSP1325-20131115|9954_1 70 PGNVAVSPSGRIF 82
                779********98 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.86
   PF06739.6  20 vDsnGN.iYvt 29 
                 vD +G  iY++
  MMETSP1325-20131115|9954_1 184 VDAEGRyIYIA 194
                 7888999**97 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 2.1
   PF06739.6  17 gIavDsnG 24 
                 +Ia Ds G
  MMETSP1325-20131115|9954_1 253 SIALDSKG 260
                 7****987 PP

  == domain 4    score: 9.5 bits;  conditional E-value: 0.00022
   PF06739.6  17 gIavDsnGNiYvt 29 
                 gI +D++ N+Yvt
  MMETSP1325-20131115|9954_1 306 GILIDDDNNVYVT 318
                 8***********9 PP

  == domain 5    score: 1.5 bits;  conditional E-value: 0.067
   PF06739.6  22 snGNiYvtGsTngnnf 37 
                 ++G iY+t s+ +  f
  MMETSP1325-20131115|9954_1 368 PDGDIYMTASALH-LF 382
                 68******99877.66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.78u 0.37s 00:00:01.14 Elapsed: 00:00:00.53
# Mc/sec: 1831.18
//
Query:       MMETSP1325-20131115|9959_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 567.83
//
Query:       MMETSP1325-20131115|9957_1  [L=318]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.41s 00:00:01.02 Elapsed: 00:00:00.55
# Mc/sec: 1385.53
//
Query:       MMETSP1325-20131115|9961_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 173.07
//
Query:       MMETSP1325-20131115|9962_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-08   32.7   0.1      1e-07   32.0   0.1    1.3  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.001   19.3   0.0     0.0012   19.1   0.0    1.1  1  PF13191.1  AAA ATPase domain
     0.0022   17.3   0.0     0.0023   17.2   0.0    1.1  1  PF01695.12 IstB-like ATP binding protein
     0.0027   16.6   0.0     0.0028   16.6   0.0    1.1  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
     0.0041   17.1   0.1     0.0061   16.5   0.1    1.3  1  PF13401.1  AAA domain
     0.0064   16.1   0.8      0.009   15.6   0.5    1.3  1  PF13245.1  Part of AAA domain
     0.0071   17.0   0.2       0.01   16.5   0.1    1.2  1  PF13207.1  AAA domain
     0.0091   15.7   0.1      0.015   15.0   0.1    1.3  1  PF13671.1  AAA domain
  ------ inclusion threshold ------
      0.011   14.7   0.0      0.011   14.7   0.0    1.1  1  PF06745.8  KaiC
      0.011   15.9   0.2      0.014   15.5   0.1    1.1  1  PF13238.1  AAA domain
      0.011   15.3   0.2      0.015   14.9   0.1    1.2  1  PF07728.9  AAA domain (dynein-related subfamily)
      0.014   14.4   0.1      0.019   13.9   0.1    1.2  1  PF01078.16 Magnesium chelatase, subunit ChlI
      0.028   13.4   0.0      0.033   13.2   0.0    1.1  1  PF06414.7  Zeta toxin
      0.031   13.7   0.1      0.035   13.5   0.1    1.1  1  PF13479.1  AAA domain
      0.044   12.8   0.0      0.044   12.8   0.0    1.1  1  PF02562.11 PhoH-like protein
      0.054   12.8   0.0      0.059   12.7   0.0    1.1  1  PF00158.21 Sigma-54 interaction domain
      0.062   12.5   0.0      0.062   12.5   0.0    1.1  1  PF13481.1  AAA domain
      0.084   12.6   0.2       0.13   12.0   0.1    1.2  1  PF01202.17 Shikimate kinase
      0.094   12.5   0.2       0.12   12.2   0.1    1.1  1  PF13521.1  AAA domain
       0.11   11.1   0.0       0.12   10.9   0.0    1.0  1  PF06068.8  TIP49 C-terminus
       0.16   11.4   0.1        0.2   11.1   0.1    1.2  1  PF13086.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.1   1.6e-10     1e-07       1      27 [.      39      65 ..      39      66 .] 0.94

  Alignments for each domain:
  == domain 1    score: 32.0 bits;  conditional E-value: 1.6e-10
                EEEE-------HHHHHHHHHHCTHEEE CS
  PF00004.24  1 vllyGppGtGKTllakavakelgvefl 27
                vll+GppGtGKTl+ kava+e+g+ f+
  MMETSP1325-20131115|9962_1 39 VLLFGPPGTGKTLIGKAVASESGACFF 65
                79********************99987 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.8e-06    0.0012       9      42 ..      21      55 ..      18      64 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 1.8e-06
   PF13191.1  9 leaLlaalrr.vsegsplllvtGpsGiGKSsLlre 42
                l+ L+a+l r  +e+ + +l+ Gp+G+GK+ + ++
  MMETSP1325-20131115|9962_1 21 LDHLEANLFRgLCERPTGVLLFGPPGTGKTLIGKA 55
                677887777746665559************99777 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   3.5e-06    0.0023      45      70 ..      34      59 ..      17      63 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 3.5e-06
  PF01695.12 45 eqaenlvllGpsGvGKthlAialgve 70
                e+   ++l+Gp+G+GKt +  a++ e
  MMETSP1325-20131115|9962_1 34 ERPTGVLLFGPPGTGKTLIGKAVASE 59
                567789*************9999875 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   4.3e-06    0.0028      51      76 ..      37      62 ..      20      65 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 4.3e-06
   PF05496.7 51 dhvllyGpPGlGkttlakiiakelgv 76
                  vll+GpPG Gkt + k +a+e g+
  MMETSP1325-20131115|9962_1 37 TGVLLFGPPGTGKTLIGKAVASESGA 62
                569*******************9876 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   9.3e-06    0.0061       5      27 ..      37      59 ..      29      63 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 9.3e-06
   PF13401.1  5 gilvvtGesGvGKTtllrrlarq 27
                + ++++G++G+GKT+  + +a++
  MMETSP1325-20131115|9962_1 37 TGVLLFGPPGTGKTLIGKAVASE 59
                5689************9999875 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.5   1.4e-05     0.009      13      32 ..      39      57 ..      27      60 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.4e-05
   PF13245.1 13 lvvtGgPGtGKTttlaaiia 32
                +++ G+PGtGKT ++ +++a
  MMETSP1325-20131115|9962_1 39 VLLFGPPGTGKT-LIGKAVA 57
                4559********.7666555 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   1.6e-05      0.01       2      22 ..      39      59 ..      39      65 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.6e-05
                E--B--TT---HHHHHHHHHH CS
   PF13207.1  2 iaitGppGsGKsTlakeLaer 22
                ++++GppG+GK+ + k++a +
  MMETSP1325-20131115|9962_1 39 VLLFGPPGTGKTLIGKAVASE 59
                7899**************987 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   2.3e-05     0.015       2      27 ..      39      64 ..      39      66 .] 0.90

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.3e-05
   PF13671.1  2 vllvGlpGsGKstlaerllkklgyvr 27
                vll G+pG+GK+   ++++ + g+++
  MMETSP1325-20131115|9962_1 39 VLLFGPPGTGKTLIGKAVASESGACF 64
                799****************9999775 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.7e-05     0.011      11      38 ..      27      55 ..      14      62 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.7e-05
   PF06745.8 11 llkgGipeg.rvvlitGepGtGKtifalq 38
                 l +G+ e+ + vl+ G pGtGKt++++ 
  MMETSP1325-20131115|9962_1 27 NLFRGLCERpTGVLLFGPPGTGKTLIGKA 55
                3336766651569*************975 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.1   2.2e-05     0.014       1      21 [.      39      59 ..      39      64 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2.2e-05
   PF13238.1  1 IlitGtpGvGKtTlakeLaer 21
                +l+ G+pG+GKt ++k+ a++
  MMETSP1325-20131115|9962_1 39 VLLFGPPGTGKTLIGKAVASE 59
                789*************99876 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.1   2.3e-05     0.015       1      20 [.      38      57 ..      38      63 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 2.3e-05
                EEEEE------HHHHHHHGG CS
   PF07728.9  1 dvlLvGppGtgKselaerla 20
                +vlL GppGtgK+ + + +a
  MMETSP1325-20131115|9962_1 38 GVLLFGPPGTGKTLIGKAVA 57
                59***********9988776 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1     3e-05     0.019      25      43 ..      39      57 ..      36      59 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3e-05
  PF01078.16 25 lllvGppGsGKtmlakrlp 43
                +ll+GppG+GKt++ k+++
  MMETSP1325-20131115|9962_1 39 VLLFGPPGTGKTLIGKAVA 57
                79************99875 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     5e-05     0.033      14      39 ..      34      59 ..      22      63 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5e-05
   PF06414.7 14 ekpkavllgGqpGAGKtslaelllee 39
                e+p+ vll G+pG GKt + +++  e
  MMETSP1325-20131115|9962_1 34 ERPTGVLLFGPPGTGKTLIGKAVASE 59
                89***************998888766 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   5.4e-05     0.035       3      22 ..      36      55 ..      34      63 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5.4e-05
   PF13479.1  3 kikvliYGkpGiGKTslakt 22
                ++ vl++G+pG+GKT  +k 
  MMETSP1325-20131115|9962_1 36 PTGVLLFGPPGTGKTLIGKA 55
                6779***********98876 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.7e-05     0.044      20      41 ..      37      58 ..      18      62 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.7e-05
  PF02562.11 20 divfaiGpaGtGKTylavalav 41
                + v+++Gp GtGKT++  a+a 
  MMETSP1325-20131115|9962_1 37 TGVLLFGPPGTGKTLIGKAVAS 58
                56899***********998885 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   9.1e-05     0.059      18      46 ..      32      60 ..      17      63 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 9.1e-05
                HTTS-S-EEEE-------HHHHHHHHHTS CS
  PF00158.21 18 vaktdltvlitGesGtGKellAraiheas 46
                + + ++ vl+ G  GtGK+l+ +a+ ++s
  MMETSP1325-20131115|9962_1 32 LCERPTGVLLFGPPGTGKTLIGKAVASES 60
                5677899**************99987665 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   9.5e-05     0.062      26      51 ..      29      54 ..       6      60 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9.5e-05
   PF13481.1 26 vkgllprgsltllaGapgtGKStlal 51
                 +gl+ r + +ll+G+pgtGK+ +  
  MMETSP1325-20131115|9962_1 29 FRGLCERPTGVLLFGPPGTGKTLIGK 54
                55777777789***********8765 PP

>> PF01202.17  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1    0.0002      0.13       1      21 [.      45      65 ..      45      65 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.0002
                -----HHHHHHHHHHT--EEE CS
  PF01202.17  1 mGaGKstvGkllAkalglefi 21
                +G+GK+ +Gk++A + g +f+
  MMETSP1325-20131115|9962_1 45 PGTGKTLIGKAVASESGACFF 65
                79*************999986 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   0.00018      0.12       2      22 ..      39      59 ..      38      65 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00018
   PF13521.1  2 ivitGgpstGKTtlleaLaar 22
                + ++G+p+tGKT + +a+a++
  MMETSP1325-20131115|9962_1 39 VLLFGPPGTGKTLIGKAVASE 59
                6899************99976 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00018      0.12      52      75 ..      38      61 ..      28      65 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00018
   PF06068.8 52 avLlaGppgtGktalaiaiskelg 75
                +vLl GppgtGkt +  a++ e g
  MMETSP1325-20131115|9962_1 38 GVLLFGPPGTGKTLIGKAVASESG 61
                79**************99998866 PP

>> PF13086.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1    0.0003       0.2      18      31 ..      37      50 ..      19      60 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.0003
   PF13086.1 18 gitliqGpPgtGKt 31
                   l+ GpPgtGKt
  MMETSP1325-20131115|9962_1 37 TGVLLFGPPGTGKT 50
                4489********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 292.89
//
Query:       MMETSP1325-20131115|9960_1  [L=329]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.34s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 1642.50
//
Query:       MMETSP1325-20131115|9949_1  [L=697]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-11   42.8  10.2        3.2    7.9   0.0    8.6  9  PF13516.1  Leucine Rich repeat
    4.4e-05   22.8   0.1        6.1    6.4   0.0    4.6  5  PF12799.2  Leucine Rich repeats (2 copies)
    0.00068   19.2   0.4         23    5.4   0.0    5.3  6  PF00560.28 Leucine Rich Repeat
  ------ inclusion threshold ------
      0.015   14.9   2.3        1.5    8.5   0.2    3.3  2  PF13855.1  Leucine rich repeat
      0.016   15.1   5.9    1.1e+02    3.6   0.1    6.5  7  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.1   5.7e+03       4      22 ..      81     106 ..      79     107 .. 0.71
   2 ?   -2.9   0.2       3.8     1e+04      11      20 ..     237     246 ..     234     251 .. 0.67
   3 !    6.6   0.0    0.0031       8.5       2      24 .]     258     280 ..     257     280 .. 0.92
   4 !    6.7   0.1    0.0031       8.4       1      21 [.     313     333 ..     313     335 .. 0.90
   5 ?    4.2   0.0     0.019        53       3      19 ..     346     362 ..     344     367 .. 0.80
   6 ?    2.4   0.1     0.076   2.1e+02       4      23 ..     376     395 ..     374     396 .. 0.92
   7 !    7.8   0.0    0.0013       3.7       4      23 ..     406     425 ..     405     426 .. 0.95
   8 !    7.9   0.0    0.0012       3.2       3      23 ..     442     473 ..     441     474 .. 0.65
   9 ?    4.1   0.0      0.02        55       1      23 [.     479     501 ..     479     504 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 2.1
   PF13516.1   4 LtsL.......dLsnNqigdeGlsaL 22 
                 L++L       d+s N  g e l+a+
  MMETSP1325-20131115|9949_1  81 LKTLrqsmladDVSENEMGPEVLQAI 106
                 66665555555789999999888876 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 3.8
   PF13516.1  11 nNqigdeGls 20 
                 +N+i ++Gl+
  MMETSP1325-20131115|9949_1 237 GNNIAGDGLC 246
                 5888777763 PP

  == domain 3    score: 6.6 bits;  conditional E-value: 0.0031
   PF13516.1   2 knLtsLdLsnNqigdeGlsaLan 24 
                 ++Lt+  + +N ++ eG+s L++
  MMETSP1325-20131115|9949_1 258 STLTTWYIAGNRLTAEGISTLCE 280
                 589999***************95 PP

  == domain 4    score: 6.7 bits;  conditional E-value: 0.0031
   PF13516.1   1 lknLtsLdLsnNqigdeGlsa 21 
                 +++L +LdL n+++ d+G+s+
  MMETSP1325-20131115|9949_1 313 NTTLAVLDLVNCGLLDDGVSS 333
                 678999************986 PP

  == domain 5    score: 4.2 bits;  conditional E-value: 0.019
   PF13516.1   3 nLtsLdLsnNqigdeGl 19 
                  L++L L +N+i  e +
  MMETSP1325-20131115|9949_1 346 ALEHLYLDGNGIRLEAC 362
                 59*********987766 PP

  == domain 6    score: 2.4 bits;  conditional E-value: 0.076
   PF13516.1   4 LtsLdLsnNqigdeGlsaLa 23 
                 L++L L+    gd Gl+ La
  MMETSP1325-20131115|9949_1 376 LKTLGLGCSRMGDSGLKLLA 395
                 99**************9997 PP

  == domain 7    score: 7.8 bits;  conditional E-value: 0.0013
   PF13516.1   4 LtsLdLsnNqigdeGlsaLa 23 
                 Lt L++ +++i++ G++ La
  MMETSP1325-20131115|9949_1 406 LTRLCVASCGISSVGAKCLA 425
                 899***************98 PP

  == domain 8    score: 7.9 bits;  conditional E-value: 0.0012
   PF13516.1   3 nLtsLdLs.........nNq..igdeGlsaLa 23 
                 +L+ Ld++          ++  igd+G+ aLa
  MMETSP1325-20131115|9949_1 442 SLRRLDVGmlkmtgalgECPnfIGDDGARALA 473
                 6777775444444444455555*********8 PP

  == domain 9    score: 4.1 bits;  conditional E-value: 0.02
   PF13516.1   1 lknLtsLdLsnNqigdeGlsaLa 23 
                 + +L+sL L +Nq++   l+a+a
  MMETSP1325-20131115|9949_1 479 NRTLRSLSLVHNQLSVLALQAFA 501
                 579************99999987 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.4   1.1e+03      25      43 ..     259     279 ..     237     280 .. 0.76
   2 !    6.2   0.0    0.0027       7.4       6      38 ..     291     328 ..     290     339 .. 0.80
   3 ?    3.4   0.0     0.019        52       3      13 ..     347     357 ..     345     383 .. 0.72
   4 ?   -3.6   0.0       3.1   8.6e+03       3      16 ..     406     419 ..     406     425 .. 0.57
   5 !    6.4   0.0    0.0022       6.1      18      37 ..     474     493 ..     464     513 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.4
   PF12799.2  25 nLktLnLsnNpisd..lsaLa 43 
                  L+t ++++N+++   +s+L+
  MMETSP1325-20131115|9949_1 259 TLTTWYIAGNRLTAegISTLC 279
                 688889999999843477775 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0027
   PF12799.2   6 LdLsnNnIkdlppe.....lanLpnLktLnLsnNpisd 38 
                 L+L +N++k + ++     la  + L +L+L n+ + d
  MMETSP1325-20131115|9949_1 291 LWLKSNPLKPVAGHflgdlLAANTTLAVLDLVNCGLLD 328
                 9********877665555578889**********9855 PP

  == domain 3    score: 3.4 bits;  conditional E-value: 0.019
   PF12799.2   3 LevLdLsnNnI 13 
                 Le+L+L +N I
  MMETSP1325-20131115|9949_1 347 LEHLYLDGNGI 357
                 55555555554 PP

  == domain 4    score: -3.6 bits;  conditional E-value: 3.1
   PF12799.2   3 LevLdLsnNnIkdl 16 
                 L+ L  +++ I+++
  MMETSP1325-20131115|9949_1 406 LTRLCVASCGISSV 419
                 44455555555555 PP

  == domain 5    score: 6.4 bits;  conditional E-value: 0.0022
   PF12799.2  18 pelanLpnLktLnLsnNpis 37 
                 ++l+  + L++L+L +N++s
  MMETSP1325-20131115|9949_1 474 ASLSTNRTLRSLSLVHNQLS 493
                 56788888999999999998 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.9   7.8e+03       6      15 ..     264     275 ..     264     282 .. 0.70
   2 ?   -3.5   0.0         5   1.4e+04       5      14 ..     291     300 ..     290     307 .. 0.78
   3 ?    1.3   0.0      0.19   5.1e+02       2      14 ..     316     328 ..     315     338 .. 0.68
   4 !    5.4   0.0    0.0083        23       2      13 ..     347     358 ..     346     370 .. 0.85
   5 ?   -1.8   0.0       1.9   5.2e+03       2      17 ..     406     421 ..     406     427 .. 0.79
   6 ?    5.0   0.0     0.011        30       2      19 ..     482     500 ..     481     505 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 2.9
                 EETSSBCB.C.H CS
  PF00560.28   6 dLsgNnlt.s.l 15 
                 ++ gN+lt + +
  MMETSP1325-20131115|9949_1 264 YIAGNRLTaEgI 275
                 5789**994464 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 5
                 EEETSSBCBC CS
  PF00560.28   5 LdLsgNnlts 14 
                 L L +N+l+ 
  MMETSP1325-20131115|9949_1 291 LWLKSNPLKP 300
                 8899999974 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.19
                 ESEEEETSSBCBC CS
  PF00560.28   2 LeeLdLsgNnlts 14 
                 L +LdL ++ l +
  MMETSP1325-20131115|9949_1 316 LAVLDLVNCGLLD 328
                 779******8764 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.0083
                 ESEEEETSSBCB CS
  PF00560.28   2 LeeLdLsgNnlt 13 
                 Le+L+L+gN + 
  MMETSP1325-20131115|9949_1 347 LEHLYLDGNGIR 358
                 9********885 PP

  == domain 5    score: -1.8 bits;  conditional E-value: 1.9
                 ESEEEETSSBCBCHHH CS
  PF00560.28   2 LeeLdLsgNnltslpp 17 
                 L++L + ++ ++s+  
  MMETSP1325-20131115|9949_1 406 LTRLCVASCGISSVGA 421
                 8899999***998765 PP

  == domain 6    score: 5.0 bits;  conditional E-value: 0.011
                 ESEEEETSSBCBCHHHH.H CS
  PF00560.28   2 LeeLdLsgNnltslpps.l 19 
                 L++L+L +N+l+ l    +
  MMETSP1325-20131115|9949_1 482 LRSLSLVHNQLSVLALQaF 500
                 9***********8655445 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.015        42       6      60 ..     291     356 ..     289     357 .. 0.52
   2 ?    8.5   0.2   0.00056       1.5       2      52 ..     481     507 ..     473     515 .. 0.62

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.015
   PF13855.1   6 LdLsnNrlkvipdgaFkgl....snLkvLdLsgnnl.ksispeafkgLp......sLreLnLsgNr 60 
                 L+L++N lk ++ +++++l    + L vLdL ++ l     + +f+gL+      +L++L+L+gN 
  MMETSP1325-20131115|9949_1 291 LWLKSNPLKPVAGHFLGDLlaanTTLAVLDLVNCGLlDDGVSSVFDGLEasgdasALEHLYLDGNG 356
                 556666666666666666666555666666664444244444566666422222246666666664 PP

  == domain 2    score: 8.5 bits;  conditional E-value: 0.00056
   PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLr 52 
                  L++L L +N l+v++  aF +l                         s++
  MMETSP1325-20131115|9949_1 481 TLRSLSLVHNQLSVLALQAFADL------------------------ASVQ 507
                 35555555555555555555555........................5444 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0         5   1.4e+04       8      14 ..     265     271 ..     264     273 .. 0.83
   2 ?    3.6   0.1      0.04   1.1e+02       2      13 ..     315     326 ..     314     331 .. 0.83
   3 ?    2.2   0.0      0.11     3e+02       2      13 ..     346     357 ..     345     361 .. 0.84
   4 ?   -0.4   0.0      0.84   2.3e+03       1      12 [.     374     385 ..     374     392 .. 0.80
   5 ?   -0.0   0.0      0.63   1.7e+03       3      15 ..     406     418 ..     406     420 .. 0.88
   6 ?   -0.8   0.0       1.2   3.2e+03       1       8 [.     441     448 ..     441     461 .. 0.85
   7 ?    3.5   0.2     0.042   1.1e+02       2      14 ..     481     493 ..     480     496 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 5
   PF13504.1   8 LsgnrLt 14 
                 ++gnrLt
  MMETSP1325-20131115|9949_1 265 IAGNRLT 271
                 789**98 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.04
   PF13504.1   2 nLkeLdLsgnrL 13 
                  L +LdL +++L
  MMETSP1325-20131115|9949_1 315 TLAVLDLVNCGL 326
                 699*******95 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.11
   PF13504.1   2 nLkeLdLsgnrL 13 
                  L+ L+L gn++
  MMETSP1325-20131115|9949_1 346 ALEHLYLDGNGI 357
                 699*******85 PP

  == domain 4    score: -0.4 bits;  conditional E-value: 0.84
   PF13504.1   1 pnLkeLdLsgnr 12 
                 ++Lk+L L + r
  MMETSP1325-20131115|9949_1 374 GRLKTLGLGCSR 385
                 58*****98765 PP

  == domain 5    score: -0.0 bits;  conditional E-value: 0.63
   PF13504.1   3 LkeLdLsgnrLts 15 
                 L++L ++++++ s
  MMETSP1325-20131115|9949_1 406 LTRLCVASCGISS 418
                 899******9976 PP

  == domain 6    score: -0.8 bits;  conditional E-value: 1.2
   PF13504.1   1 pnLkeLdL 8  
                 p+L++Ld+
  MMETSP1325-20131115|9949_1 441 PSLRRLDV 448
                 79****98 PP

  == domain 7    score: 3.5 bits;  conditional E-value: 0.042
   PF13504.1   2 nLkeLdLsgnrLt 14 
                  L+ L+L +n+L 
  MMETSP1325-20131115|9949_1 481 TLRSLSLVHNQLS 493
                 69*********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.05u 0.33s 00:00:01.38 Elapsed: 00:00:00.62
# Mc/sec: 2693.97
//
Query:       MMETSP1325-20131115|9965_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|9964_1  [L=192]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 902.16
//
Query:       MMETSP1325-20131115|9966_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-10   40.5   0.0    4.5e-10   39.3   0.0    1.5  2  PF08212.7 Lipocalin-like domain


Domain annotation for each model (and alignments):
>> PF08212.7  Lipocalin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.45   6.2e+03      47      61 ..      54      68 ..      45      74 .. 0.74
   2 !   39.3   0.0   3.3e-14   4.5e-10       1     135 [.     138     289 ..     138     295 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 0.45
   PF08212.7 47 kvdgklkeiegkAkv 61
                ++ +k+++++g+A+ 
  MMETSP1325-20131115|9966_1 54 SFTDKWDSATGDATT 68
                467799999999986 PP

  == domain 2    score: 39.3 bits;  conditional E-value: 3.3e-14
   PF08212.7   1 vdlkrYlGtWyeiAr...lpmrfergcvdvtaeYtlrddg.tiaVenrcrkvdg..klkeiegkAkvedpaseaklkVsFlkefl......vvkgdYwvlel...ddd..yslalvgspdrkylwilsRtpqlseeqle.qllekareqGydv 135
                 +d+  YlG+Wy+  +   +   f+ g + vta+Y    ++  i+V+n++r   g  k   i+g A v++p++e++l+V   +         ++k++Yw++ l   ++d  y +a v+    ++l++l+R ++  ++++e  +l++ +eqG+ +
  MMETSP1325-20131115|9966_1 138 LDAAAYLGRWYQTYAsrtVKDTFQLGGNCVTADYGATSNEtVISVTNTVRLISGlgKGIVINGYA-VQSPSTEGELQVVLGPSADpenpneFTKSNYWIIGLgpiNSDglYDWATVSDEGLQSLYVLARDVATFKADYEdDVLATLAEQGFTT 289
                 69999******9743122567899**********988776479********99855666777776.466677*******999555999999********97522234456********************9988877762699999999*965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1278.06
//
Query:       MMETSP1325-20131115|9967_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-05   23.9   0.8    2.8e-05   23.4   0.6    1.2  1  PF02213.11 GYF domain
  ------ inclusion threshold ------
      0.011   15.1   0.9      0.015   14.7   0.6    1.2  1  PF14237.1  Domain of unknown function (DUF4339)
      0.033   14.1   0.4      0.054   13.5   0.3    1.3  1  PF01473.15 Putative cell wall binding repeat


Domain annotation for each model (and alignments):
>> PF02213.11  GYF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.6   6.1e-09   2.8e-05       2      19 ..      31      48 ..      30      49 .. 0.92

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 6.1e-09
                -EEEE-----EE-EE-HH CS
  PF02213.11  2 qWeYkdpqgkiqGPFsse 19
                +W+Y+d +g++qGPF +e
  MMETSP1325-20131115|9967_1 31 EWYYRDTNGQVQGPFQNE 48
                7**************986 PP

>> PF14237.1  Domain of unknown function (DUF4339)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.6   3.3e-06     0.015       1      17 [.      31      48 ..      31      49 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 3.3e-06
   PF14237.1  1 ewyyar.ngqqaGPfsle 17
                ewyy + ngq +GPf+ e
  MMETSP1325-20131115|9967_1 31 EWYYRDtNGQVQGPFQNE 48
                8****99********876 PP

>> PF01473.15  Putative cell wall binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.3   1.2e-05     0.054       6      17 ..      28      39 ..      28      40 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.2e-05
                ETTEEEEES--- CS
  PF01473.15  6 dngnWYYfdsdG 17
                +++ WYY d +G
  MMETSP1325-20131115|9967_1 28 ISNEWYYRDTNG 39
                799********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 312.99
//
Query:       MMETSP1325-20131115|9970_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 200.51
//
Query:       MMETSP1325-20131115|9973_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        89  (0.00650965); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.72
# Mc/sec: 106.50
//
Query:       MMETSP1325-20131115|9974_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.91    9.7   5.8        1.1    9.4   4.1    1.0  1  PF13191.1 AAA ATPase domain


Domain annotation for each model (and alignments):
>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   4.1     8e-05       1.1      77     159 ..       6      90 ..       2      97 .. 0.62

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 8e-05
   PF13191.1  77 ellrqlltelaaelggwreallaalgalipelegiiglqalvalldaalartrrpk.lvlvlDD.lqwadresldlLeallerls 159
                 +ll++llt+ +++  ++ +  la+   + ++ + +++   ++a+ +++lar++ ++ +vl lD    +a +++l lL a+ + l+
  MMETSP1325-20131115|9974_1   6 HLLKRLLTHPVRARVDALDRDLALVRVQVLARSATESRVTTAAVWRDHLARAHTQRvVVLALDRvDVRAAADRLLLLVAAVDPLP 90 
                 444444444444444444444444444444445556666777788888888886667******6567777777778887777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|9971_1  [L=576]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-42  143.5   0.0    7.5e-42  142.7   0.0    1.3  1  PF14308.1  X-domain of DnaJ-containing
    2.5e-26   91.0   0.5    4.6e-26   90.2   0.4    1.5  1  PF00226.26 DnaJ domain
    2.2e-06   27.6   0.0    8.5e-06   25.7   0.0    2.0  1  PF09333.6  ATG C terminal domain


Domain annotation for each model (and alignments):
>> PF14308.1  X-domain of DnaJ-containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.7   0.0   1.6e-45   7.5e-42       2     187 ..     315     509 ..     314     519 .. 0.89

  Alignments for each domain:
  == domain 1    score: 142.7 bits;  conditional E-value: 1.6e-45
   PF14308.1   2 eqkkreeeLaekLrdrlseyvdgnk..deFkeklekeieeLkeesFglellhtIGkvYenkAnaflgksktflglsgifasvkekgksvkstfsalssaldaqksmeemekeeeee.....geeteee........laemeekvtgkilaaawaiskfdiestlrkvCdkvLkDksvdkktRikRAeaLkilGkifqkvkr 187
                 +q++re+++a +Lrd l+++v+g+k  ++F+e+++ +++ L   +Fg ellhtIG++Y   +++ lg +    gl+g + s+k+kg+ +  +f a  ++++a  s+++++k e+ +     +     +        + +++   +  ++ a+w++s++diestlr +C+kvL+Dk+vdk+   +RA+a+ i+Gk+f +++ 
  MMETSP1325-20131115|9971_1 315 RQRRREVQCAVNLRDLLEPFVSGEKdeNAFTEEIQVKATGLATTPFGEELLHTIGYTYALAGQKQLGRQAPL-GLEGHMLSLKQKGHILGTRFDAFGAGVKAFVSQQRASKSEKLGadgaaE-----DgatdpdkpMSQSQAALMVDFMTALWKVSVLDIESTLRSACHKVLHDKAVDKAAITERAKAMAIVGKVFLETQC 509
                 599******************76662277*************************************988888.**************************************88777444431.....33334444699999999999*************************************************99875 PP

>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   0.4     1e-29   4.6e-26       1      64 []     198     260 ..     198     260 .. 0.99

  Alignments for each domain:
  == domain 1    score: 90.2 bits;  conditional E-value: 1e-29
                 HHHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
  PF00226.26   1 dyYeiLgvpkdasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevLsdpekraeyd 64 
                 ++Y++Lgv +das+ +IkkaY+klalk+HPDkn++d+ ea+ekf+++  Ay+vLs+p+ r++yd
  MMETSP1325-20131115|9971_1 198 EFYDLLGVAPDASAGQIKKAYYKLALKLHPDKNPNDP-EAAEKFQKVGSAYQVLSNPTLREKYD 260
                 69***********************************.9************************8 PP

>> PF09333.6  ATG C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   1.9e-09   8.5e-06       6      89 ..      44     127 ..      40     136 .. 0.90

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 1.9e-09
   PF09333.6   6 yanqPadlreGlakAysslreglkdtaqtllavasevheqkglqgavgavlkaiPiavvrPligateavsktlgGvrnqldpda 89 
                 y++ P+ + eG   +++s+++g+   a tl+a++  + +++g++g+++++      a+v P+ ga+  +++t+ G+ n  +  +
  MMETSP1325-20131115|9971_1  44 YKEPPRHVGEGAWRGLKSIGTGVLAGATTLVAAPVMGAREEGAKGFAKGLGVGLLGAIVLPVTGAAVGIKETVHGAINTPEAVK 127
                 8899************************************************************************99655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.87u 0.36s 00:00:01.23 Elapsed: 00:00:00.71
# Mc/sec: 1944.09
//
Query:       MMETSP1325-20131115|9976_1  [L=481]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-49  166.0   5.7    1.8e-48  164.8   4.0    1.5  1  PF01490.13 Transmembrane amino acid transporter protein
     0.0022   17.9   1.2     0.0022   17.9   0.8    3.9  2  PF09685.5  Tic20-like protein


Domain annotation for each model (and alignments):
>> PF01490.13  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.8   4.0   2.7e-52   1.8e-48       2     407 ..      28     473 ..      27     476 .. 0.88

  Alignments for each domain:
  == domain 1    score: 164.8 bits;  conditional E-value: 2.7e-52
  PF01490.13   2 tssalsavlnlikaivGaGvLaLPyAfkqlGllvGlillllvalislytlllLvkcsktla.vkgkrnksYgdlv..................yrllGpkgkliidlailvqlfGvgvsyliligdllpaifesffdtlhisnvyfilisaliiipLslirnlsaLsylSllaavsslyyivilvlvvaelvklelqgvseeavkkasklkglflaigiivFAfeghavllpiqnelkdpskfkkmtkvlllsiilvtvlyilvGlvGYltFGn......e......vkgnillnlpkssilivivnvllvlalllsfplqlhplrevvenvlirk.....................eavagasekkapkskllrlvirlllvvityliAlsvpslakvlslvGatsstslsfilPalfhlkliktekkslek.....lilkkildlicivvglllvvyglav 407
                  ss++++++n +k ++Ga  + LP+Af q+Gl+++++ +++ a+is+++l  L+ c   +   ++ r  +  ++                   + ++G +g  + ++  l   +Gv+ sy+++i+ ++ ++++        +++ + +i++++++++s++r ls L+y+S +++++++   +++v+ +++       +v++ ++    k  +++l++g++ F +  ++ +lp+ +++++p+ f+   ++l++si++vt+l ++++++ ++ +G+      +      v++n++ nl     l ++v++ll++ ll++  ++l+p+ e++e  ++                       ++  g  + ++  +   ++++r++l v++ l+A +vps++++ +l+G ++   l filP++++  l+++   +  +     +++++ + l+++ +g+++ v++++ 
  MMETSP1325-20131115|9976_1  28 ASSFRKTMINTTKCFIGAASFELPWAFMQAGLVGSVAGVCFLAAISSFSLQRLAMCPVLVHeTTQARAIRSNTHEgeirdearglyltypaigRVCFGAWGEAVSWFGVLAMTLGVAGSYFVFIATTMAELTDL-------DMNAWLAITLVVVSVFSWLRRLSVLAYTSAFGIMALI---LAVVVTSVDAAQNHTPNVGDLDF---WKWDTYPLFLGNAGFLYLISTAILPLAQDMETPERFP---GALNNSIVFVTLLNLAFAIFAWASYGScdehhdDddektcVQSNVIDNLTAGG-LATTVKLLLCVDLLFTSIMFLYPVNEAIEEQIFGPpkanpmrsphvsfvldeeegrNHLXGMRPARQVDHVEKKNMVRTCLAVAVALVAHLVPSFSLLTGLTGGFGNNILGFILPPVYYWTLKEKAGAWVDEkgkriRVFEQGALLFTFLFGCFFLVLSTYS 473
                 589*******************************************************999844444333333335889******************************************************7.......9*********************************995...57777777777777778888877...77778********************************...9*************************74444440444555999******9999.********************************98899*****************998888888899999999999**********************************************99876555443111114555555666666777666666665 PP

>> PF09685.5  Tic20-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -10.1  11.6         2   1.4e+04      62      97 ..     182     213 ..      67     342 .. 0.78
   2 !   17.9   0.8   3.2e-07    0.0022       6      68 ..     397     470 ..     393     480 .. 0.75

  Alignments for each domain:
  == domain 1    score: -10.1 bits;  conditional E-value: 2
   PF09685.5  62 sllllligiglllllalllalvftilaaikaneGea 97 
                      l ++++  ++ +++ ++ +++ ++ a++ ++
  MMETSP1325-20131115|9976_1 182 R----LSVLAYTSAFGIMALILAVVVTSVDAAQNHT 213
                 1....1222222222223334445556666666655 PP

  == domain 2    score: 17.9 bits;  conditional E-value: 3.2e-07
   PF09685.5   6 aalihls...........ll..llllgfigplivwllkkdkspfvrehakealnfqislliygvvlgvlsllllli 68 
                 a+++hl             +   +l++++ p+  w lk++  ++v+e +k +  f+   l++++++g ++l+l   
  MMETSP1325-20131115|9976_1 397 ALVAHLVpsfslltgltgGFgnNILGFILPPVYYWTLKEKAGAWVDEKGKRIRVFEQGALLFTFLFGCFFLVL--S 470
                 67777666666767766633545556666699999999999**************************999999..2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       657  (0.0480544); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.36s 00:00:01.23 Elapsed: 00:00:00.60
# Mc/sec: 1921.08
//
Query:       MMETSP1325-20131115|9977_1  [L=400]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       651  (0.0476156); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.88
# Mc/sec: 1089.25
//
Query:       MMETSP1325-20131115|9975_1  [L=882]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-41  141.4   0.0    6.9e-41  140.3   0.0    1.6  1  PF02129.13 X-Pro dipeptidyl-peptidase (S15 family)
    1.1e-24   87.3   0.1    2.1e-24   86.5   0.1    1.4  1  PF08530.5  X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
     0.0001   22.1   0.0    0.00037   20.3   0.0    2.0  1  PF12697.2  Alpha/beta hydrolase family
    0.00022   20.9   0.0    0.00066   19.3   0.0    1.8  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.068   12.9   0.0       0.21   11.3   0.0    1.8  1  PF12146.3  Putative lysophospholipase
        3.2    7.7   6.5        1.9    8.5   1.9    2.6  3  PF13664.1  Domain of unknown function (DUF4149)


Domain annotation for each model (and alignments):
>> PF02129.13  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.3   0.0     3e-44   6.9e-41       1     271 [.     230     569 ..     230     570 .. 0.76

  Alignments for each domain:
  == domain 1    score: 140.3 bits;  conditional E-value: 3e-44
                 ---EEEEEEEEE.....T........TSSSBEEEEEEESS-..TTH.HHHHHCTCHHCCH...HH.........HHC---EEEEEE----TT------TT.TCCHHHHHHHHHHHHHHCTTBE-EEEE---TT---HHHHHTTS--TTB-EBEEBSB-SBCHHIHCB----BBHHHHHHH........................CCHHCHHHCCTCCCGSTTCHHHHHHH............................................HHHCCHHHHHHHSTT............THHHHCCCC--SSSHHHHTTBHGGGH....HG--SEEEEEE--B-SSS-HHHHHHHHHHCCTT-..EEEEE---BSS CS
  PF02129.13   1 DGvrLavdiyrP...etk........skkklPvlltrtpYn..ksdelaatlasalgekelqdka.........fvarGYavVvvdvrGtgaSeGeftvg.sedevedgadvidWlakqpwsnGkVGmtGiSYdGttqlaaaatgvpalkaivpesaisdlydeyyregGlvrapggltw........................edldllaealesrradegdalkaaar............................................yeaagdellkkqdre............tkvlselletgdydafwkernlseda....dkvkvpvllvsGwnDwnvkrgviklyealkesgskekklvlgpwtHv 271
                 DGvrLavdi++P   +t+        ++++lP+ l+ t+Y+   ++++  +++++ g ++++            fv++GYa+V vdvrGtgaS G +  +  ++e+ d++++ dW+++q+++nG++G+ GiSYdG+t  ++aa  +  ++a++ ++a+ d y++++ +gG+ +  +++ +                        +                                                                     +         ++ ++            +   ++l+e++ ++  + +  + ed+    +k kv+v++v+G++D+   r++ +l+++l   +s   kl++gpw+H 
  MMETSP1325-20131115|9975_1 230 DGVRLAVDIVLPnrwGTTnaqfwkwgGAEELPTFLHLTRYHrsNKRSWLTRVFYLFGMPPSDVFSvrsmhyinaFVPHGYAFVTVDVRGTGASFGSRPLDlIDREILDFKEISDWVKEQKFCNGRIGTGGISYDGITGALMAA--QGNINAAALLFAPGDIYEDIAVPGGVPCTGFVDMYgkfttasennepvldvdnelpkayK------------------------LimglaldgvapvdaagqwwindrdfyesylgmghspehelkaavA---------EHRDNfdmvqairdpsiMAKDDTLVELDGKRLSFYDVGITEDTfaglRKHKVKVYSVAGYFDSGSIRSAARLHNQLGPVRS---KLTIGPWSHG 569
                 9***********998444122222225789***********8756668888888888777666669*********************************9999************************************9999..5679999************************99995555555555555555555555541........................1555555555555555555555555666666665553333332221.........22222444444444444444455888888888888888887767888********************************95...9********5 PP

>> PF08530.5  X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.5   0.1   9.3e-28   2.1e-24       4     185 ..     619     854 ..     616     874 .. 0.86

  Alignments for each domain:
  == domain 1    score: 86.5 bits;  conditional E-value: 9.3e-28
                 ----SEEEEECTSSSEEEEES.SSS-TT-EEEEEE--....S-EEEEES---HCCCHHHHHECHHHCCCCCTT.......................GGGTT-TTSBEEEE....EE-SS-EEE----EEEEEE...EESSSS-EEEEEEEEE--ES-EEEEE---EECCCCC-TTCE......................----TT--EEEEEE-----EEE-TT-EEEEEEES--CTTS CS
   PF08530.5   4 erlppvrlqdndgedpwrted.dwpspattattlyls....qrglsstaggtlstaspssddgaaakevlydp.......................dqreeradvltftt....aplaedteivGapkvkLrv...ssdapdadlsvkLvdvgpdgraklitkGilrlsnrksleea......................epltPgeiydvtleLqptaytfpkGhrlrleisssdfpht 185
                  ++ pv++++  g d+wrt++ +wp+ ++    + l     +++l + a+  +s  ++++d ga  ++ ++++                        +  e  ++l+ftt    a  +e+++ivG p+v+L +   ++da da ++++L d+++ g+ ++it+G+ r+s+ +sl+ +                       pl+  ++ +v++ L p ayt+++Gh+l l+++++d++ +
  MMETSP1325-20131115|9975_1 619 RKEAPVHYFVS-GVDEWRTAPdTWPPAGAISCAYDLAavsnGGALWPSAEAAGSA-AAKDDAGA-VEYKVHSNstsgvvsrwnlvqhlmkqavtypNRASEAGTSLVFTTqrdgADAQEAITIVGSPRVRLELellEPDAVDAVVFAYLEDIDASGEVSYITEGQVRASHPASLNYNgieavrvghfdeakrtfqradmAPLKSRTPSTVEFMLEPVAYTLLPGHQLSLSLAGADKDNF 854
                 6799*******.999**99862699999988899999999555555555555555.55445455.467777777***************9999999889999******98555578***************972225788899********************************************************************************************9877 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.6e-07   0.00037      18     150 ..     301     475 ..     292     694 .. 0.71

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.6e-07
                 HHHH.TTTSEEEEE-----------S...S--HHHHHHHHHHHHHH--......--EEEE--------HHHHHH----.EEEEEEE------STT................................................---TTHHHHHHHHHH----....--H..HHHHH-..----HHHHHH CS
   PF12697.2  18 aeaL.aagyrvvapDlpGhGrSdrppdydpdtledlaadlaalldalgl.....rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgplpas................................................alrpagpsllrrllagraaalrdlaarafarlfd..gdelealvra 150
                 ++a+  +gy  v++D +G+G+S + ++   d +++ + d+ ++ d +       +++   G S+ g++++++aa+  +++ + +l+ +pg+ ++                                                            +++   aa  + + +r f++     g+++e+ ++a
  MMETSP1325-20131115|9975_1 301 INAFvPHGYAFVTVDVRGTGASFGSRP--LDLIDREILDFKEISDWVKEqkfcnGRIGTGGISYDGITGALMAAQ--GNINAAALLFAPGDIYEDiavpggvpctgfvdmygkfttasennepvldvdnelpkayklimglalD----------GVAPVDAAGQWWINDRDFYESYLgmGHSPEHELKA 475
                 4455379*****************874..66788888888776666666555779******************98..6788888888888766668899999999999988888888888888777776555544433322220..........22222222222233333333332233444443333 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.9e-07   0.00066      19     123 ..     301     451 ..     292     490 .. 0.68

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 2.9e-07
   PF12695.2  19 aealakrgfavvavdlpghgasegaa.............aakrvlaadll..dleriilvGhSlGGgvalelagrddrvkglvllap...f.........pdgedlakltl.............................pvllihGtr.Dgvvppeeaekl 123
                  +a++ +g+a v+vd +g+gas g++             + ++++ ++++  + +ri+ +G S+ G +++++a++ +  +++ l+ap   +         p         +                                li G + Dgv+p+++a ++
  MMETSP1325-20131115|9975_1 301 INAFVPHGYAFVTVDVRGTGASFGSRpldlidreildfkEISDWV-KEQKfcN-GRIGTGGISYDGITGALMAAQGNINAAALLFAPgdiYediavpggvP---------CtgfvdmygkfttasennepvldvdnelpkAYKLIMGLAlDGVAPVDAAGQW 451
                 678999****************99997888888888777667777.7777855.7****************9*9864445555566667632222222220.........2222333333333333444445555555553333333333666666666655 PP

>> PF12146.3  Putative lysophospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   9.2e-05      0.21      31      61 ..     296     326 ..     292     346 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 9.2e-05
   PF12146.3  31 rYqelaedLaaqGyavyayDhrGhGkseger 61 
                 r  + +++++ +Gya+++ D rG G s g+r
  MMETSP1325-20131115|9975_1 296 RSMHYINAFVPHGYAFVTVDVRGTGASFGSR 326
                 667889999******************8765 PP

>> PF13664.1  Domain of unknown function (DUF4149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.9   0.00082       1.9      30      82 ..      38      90 ..      28     124 .. 0.83
   2 ?   -2.0   0.1       1.5   3.3e+03      48      55 ..     146     153 ..     100     180 .. 0.52
   3 ?   -1.9   0.0       1.4   3.1e+03      13      29 ..     825     841 ..     823     844 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00082
   PF13664.1 30 agelqsklFpvyfglglalsvlllltevankeklaseellqlllllvvlllsl 82
                  +++s++ p yf + l++ ++++l+ ++  e  ++ + ++  +ll++lll+l
  MMETSP1325-20131115|9975_1 38 DRNVASEILPFYFAMALVFNTFSFLSVMKDAEAFTATDPMAGNVLLLLLLLVL 90
                56899***********************9996666666555555555555554 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.5
   PF13664.1  48 lsvllllt 55 
                  +v +l++
  MMETSP1325-20131115|9975_1 146 GAVCMLAI 153
                 22222223 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 1.4
   PF13664.1  13 vtfvvapvlfrsLprhq 29 
                 v f+++pv++  Lp hq
  MMETSP1325-20131115|9975_1 825 VEFMLEPVAYTLLPGHQ 841
                 6699**********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (882 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.24u 0.36s 00:00:01.60 Elapsed: 00:00:00.74
# Mc/sec: 2856.20
//
Query:       MMETSP1325-20131115|9980_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 945.23
//
Query:       MMETSP1325-20131115|9979_1  [L=308]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-72  243.6   5.7      3e-72  243.3   4.0    1.1  1  PF00503.15 G-protein alpha subunit
    1.7e-10   40.3   0.4    4.1e-10   39.0   0.3    1.6  1  PF00025.16 ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.011   14.7   0.1      0.015   14.3   0.0    1.3  1  PF04670.7  Gtr1/RagA G protein conserved region


Domain annotation for each model (and alignments):
>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.3   4.0   6.5e-76     3e-72     183     388 ..       4     204 ..       1     205 [. 0.97

  Alignments for each domain:
  == domain 1    score: 243.3 bits;  conditional E-value: 6.5e-76
                 HHHHTTHHHHHSTTXXXXHHHHHHXXXXXXXXEEEEEXX.XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEEEGGGTTXBXSSXTTSBHHHHHHHHHHHHHTXGGGSSXEEEEEEEXHHHHHHHTTTSXG.GSGGGTTXXXX..HHHHHHHHHHHHHHHHHHHHTXXGSXEEEEEXXTTXHHHHHHHHHHHHHHHHHHHHHCXXX CS
  PF00503.15 183 eyFldnleriaspdYvPtddDilrarlkttGiseikfevesktefrlvDvGGqrserkkWipcfedvdaiiFlvslsefdqvlyedesvnrleeSlklFksicnnkllkntpiiLflNKlDileeKlkkgpk.lskyfpsyegdrendyesaskylrnkfkeinrensenrkiythftsatdtenvrkvfaavrdiilrenlkksgl 388
                 + F+d+++ ia  dY Pt + +l ar++t+Gi   ++ + ++++f+++DvGGqr+erkkWi+cf++v+a+iF+ ++se++q+l+ed s+nr++e+l+l++++ nn+++++++++LflNK+D++eeK+ k p   +  f +y+g+   dy+   +y+ ++f ++n++    r++y+h+t+atdt nv++vf++++diil++nlk+sg+
  MMETSP1325-20131115|9979_1   4 SKFFDEVDTIAADDYCPTAQHMLTARVRTSGIVTESYVI-DGNTFEMYDVGGQRNERKKWIHCFDNVTAVIFVGAISEYNQKLFEDTSTNRMKEALDLYDEVSNNRYFEKSSMLLFLNKKDLFEEKIAKIPInDTPDFADYTGG--ADYKAGCDYFIERFRQLNKTD---REFYYHLTCATDTSNVKMVFNTCKDIILKNNLKDSGF 204
                 56*************************************.9*****************************************************************************************966666799999**..9*****************987...9********************************9985 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.3   8.9e-14   4.1e-10      42     129 ..      29     126 ..      21     134 .. 0.82

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 8.9e-14
                 E-S--S-EEEEEEETTEEEEEEE----GGGGGCGGGGCTTECEEEEE..........EETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT CS
  PF00025.16  42 tvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifv..........vDsadreRleeakeeLkalleeeelkevallvlaNKqDlpe 129
                  v T g  +e+  i + +f+++DvGGq++ R+ W + f++++avifv           + + ++R++ea +  +++ +++  ++  +l++ NK+Dl e
  MMETSP1325-20131115|9979_1  29 RVRTSGIVTESYVIDGNTFEMYDVGGQRNERKKWIHCFDNVTAVIFVgaiseynqklFEDTSTNRMKEALDLYDEVSNNRYFEKSSMLLFLNKKDLFE 126
                 5668999999999*********************************944222222212233456999999999999999999*************976 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.4e-06     0.015      38     129 ..      37     130 ..      17     181 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.4e-06
   PF04670.7  38 eqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDie...........sreleedlekfqeileallqyspeakvfvlihKmDliseder 129
                 ++s v   +  ++++ D+gGq +  ++       + f nv ++i+V  i+           ++ ++e+l+ + e+ ++  +y ++ ++  +++K Dl +e+  
  MMETSP1325-20131115|9979_1  37 TESYV--IDGNTFEMYDVGGQRNERKKW-----IHCFDNVTAVIFVGAISeynqklfedtsTNRMKEALDLYDEVSNN--RYFEKSSMLLFLNKKDLFEEKIA 130
                 33333..333489********9988885.....69***********99997777776665222366666666665443..56677788899999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       469  (0.0343037); expected 273.4 (0.02)
Passed bias filter:                      388  (0.0283792); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 1570.38
//
Query:       MMETSP1325-20131115|9978_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 1427.16
//
Query:       MMETSP1325-20131115|9983_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.016   14.8   2.8      0.029   14.1   2.0    1.4  1  PF06428.6  GDP/GTP exchange factor Sec2p
      0.026   14.2   0.2      0.044   13.5   0.1    1.3  1  PF00213.13 ATP synthase delta (OSCP) subunit


Domain annotation for each model (and alignments):
>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.0   4.2e-06     0.029      45      91 ..      14      60 ..       7      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.2e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT-------X CS
   PF06428.6 45 ekeaveeknekleeqLkekelllevlqaqlkeLKelleslekekngs 91
                 k++++ +  kl +qL++ + ++e++++++++L++ + ++++ ++  
  MMETSP1325-20131115|9983_1 14 AKRQTDSHALKLVKQLDDNQRIIEMQKMEISQLRTKMADMQQRREAA 60
                4578889999*****************************99887554 PP

>> PF00213.13  ATP synthase delta (OSCP) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   6.5e-06     0.044      55     115 ..       8      69 ..       3      80 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.5e-06
  PF00213.13  55 dllkkvfkgklseavknflklLaenkRlallpei.aeefeelaaeaegiveaeVtsavpltd 115
                 ++l++ +k + +++  +++k+L +n+R+  ++++ ++++++ +a+ +++ ea V+s  plt+
  MMETSP1325-20131115|9983_1   8 AALHAQAKRQTDSHALKLVKQLDDNQRIIEMQKMeISQLRTKMADMQQRREAAVQSINPLTS 69 
                 56777788899*********************99789***********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       945  (0.0691194); expected 273.4 (0.02)
Passed bias filter:                      629  (0.0460064); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 691.26
//
Query:       MMETSP1325-20131115|9984_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-29   99.7   0.1    2.2e-28   98.3   0.0    1.6  2  PF02852.17 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
    3.6e-09   36.6   0.1    6.6e-09   35.8   0.1    1.4  1  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> PF02852.17  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.31   2.1e+03      53      74 ..      20      42 ..       5      63 .. 0.65
   2 !   98.3   0.0   3.2e-32   2.2e-28       1     109 [.      77     191 ..      77     192 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.31
                EEEET.TTTBB---EEEETTHHH CS
  PF02852.17 53 lvvda.etgkvlGahivGpgase 74
                +vv++ ++  v G+  +G+  ++
  MMETSP1325-20131115|9984_1 20 IVVNEyQETSVKGVYALGDVCGD 42
                55555566678888888877776 PP

  == domain 2    score: 98.3 bits;  conditional E-value: 3.2e-32
                 BEEEEESSSEEEE----HHHHHHHT....EEEEEEEECCGHHTTTTT.....CCEEEEEEEETTTTBB---EEEETTHHHHHHHHHHHHHCT-BHHHHHTSBSSSSSSGGGHHHH CS
  PF02852.17   1 vpsvvftdpeiasvGlteeeAkkagge..ikvgklpfkandralayae....tkgfvKlvvdaetgkvlGahivGpgaseliqelavaikagltvedlantvfihPtlsealkea 109
                 vp+v+f++p+i+++Glte+eA+++  e  i v++++f ++ +  ++ e     k+  Kl+++ +++ v+G+h++G g +e++q++ va+k+g+t++d++++v+ihPt  e+++++
  MMETSP1325-20131115|9984_1  77 VPTVIFSHPPIGTMGLTEQEAREKWPEdeIFVYTSTFVNLFYGPWKMEpsekPKTAYKLICHGKDETVVGMHLIGMGSDEVLQGFGVAMKMGATKADFDSCVAIHPTAGEEFVTL 191
                 79**********************9889999999999987776666666677************************************************************986 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.1   9.7e-13   6.6e-09     165     197 ..       9      41 ..       4      43 .. 0.92

  Alignments for each domain:
  == domain 1    score: 35.8 bits;  conditional E-value: 9.7e-13
                 HSS--BESSSSBBE-TTSBCSSTTEEE---TCE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF07992.9 165 kagveldprggivVdeylrtsvpgiyaiGDvae 197
                  ag+e++p g+ivV+ey++tsv+g+ya+GDv++
  MMETSP1325-20131115|9984_1   9 XAGIETKPSGHIVVNEYQETSVKGVYALGDVCG 41 
                 68*****************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1020.85
//
Query:       MMETSP1325-20131115|9982_1  [L=457]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.2   0.3     0.0022   17.4   0.2    1.3  1  PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
  ------ inclusion threshold ------
        0.1   12.3  13.3      0.072   12.9   4.9    3.1  3  PF13424.1  Tetratricopeptide repeat
       0.11   12.2   0.2       0.43   10.4   0.1    1.9  2  PF00424.13 REV protein (anti-repression trans-activator protein)
       0.16   10.9   0.1       0.24   10.2   0.0    1.2  1  PF01544.13 CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.2   6.3e-07    0.0022     122     194 ..     132     204 ..     129     216 .. 0.90

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 6.3e-07
   PF09986.4 122 lrlAWlyrdledeekeklflkkAlelykeayekekfpiegideatvlYLiaeLerrlgnkeealkwlskvigs 194
                  ++A ly+++ ++++   flk+A++++ ea   + ++ ++ +++      a+L+ + g+ ++a++ + +v++s
  MMETSP1325-20131115|9982_1 132 TKAAQLYDKAANKYQGAGFLKEAADMFVEAAALDAREQYHGKAQAHYAKAADLAAKDGDPHRACQLYHQVFES 204
                 699*******************************99877777777666789*******************987 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   4.9   2.1e-05     0.072       4      76 ..     134     205 ..     131     207 .. 0.87
   2 ?    5.3   2.0    0.0047        16       8      46 ..     177     216 ..     174     240 .. 0.59
   3 ?    1.3   0.0     0.086   2.9e+02      55      76 ..     265     286 ..     264     295 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.1e-05
   PF13424.1   4 latilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtara.lnnlanlylalgdydeAleylekAleia 76 
                  a++++  a+ ++  g ++eA +++ +a +l +re+ +     a a +   a+l ++ gd   A ++++++ e +
  MMETSP1325-20131115|9982_1 134 AAQLYDKAANKYQGAGFLKEAADMFVEAAALdAREQYHGK---AQAhYAKAADLAAKDGDPHRACQLYHQVFESY 205
                 5899***************************988775444...544399999******************98765 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.0047
   PF13424.1   8 ln.nlalvlrrlgdydeAlelyekalellrelgddhpdta 46 
                 ++   a++  + gd ++A +ly ++ e + el  dh+ +a
  MMETSP1325-20131115|9982_1 177 HYaKAADLAAKDGDPHRACQLYHQVFESYLELDADHLARA 216
                 4303455555888888888888888888556777776555 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.086
   PF13424.1  55 lylalgdydeAleylekAleia 76 
                 +y++++d   A   +++Al+i 
  MMETSP1325-20131115|9982_1 265 IYQEANDWFLATGRYKDALDIS 286
                 5666666666666666666654 PP

>> PF00424.13  REV protein (anti-repression trans-activator protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00012      0.43      29      47 ..     109     127 ..      99     162 .. 0.71
   2 ?   -2.0   0.0      0.87     3e+03      47      75 ..     279     307 ..     277     320 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00012
  PF00424.13  29 eeGtarqRrnrRrRwrqrq 47 
                 ++G ar Rr+rRrR+   +
  MMETSP1325-20131115|9982_1 109 RHGHARRRRRRRRRFSVFW 127
                 6789999999999954444 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.87
  PF00424.13  47 qkqilalaerilstpldrpldepldlaiq 75 
                 +k  l +++r++s  + +++ + l ++  
  MMETSP1325-20131115|9982_1 279 YKDALDISDRLISCLKKNNVRASLAKTYL 307
                 56667889999998877777777766655 PP

>> PF01544.13  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0     7e-05      0.24      25     133 ..     284     393 ..     267     401 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 7e-05
  PF01544.13  25 glpelaledlldeeerprvedyddylllvlpaveldeeeeeerevplsillgdnflitvrkeplealdeiikrle...kegekpkspgellyelldeivdryfeilekleee 133
                 ++ +  ++ +l+++   r+  +++yl+ v+  ++l+ ++ +  ++ ++ l ++++l+t + +  e l  ++k+ +    ++ k++s++++l++ ++ +v +++   ++lee+
  MMETSP1325-20131115|9982_1 284 DISDRLIS-CLKKN-NVRASLAKTYLTTVVLELHLTGDAIKAHQTFMNHLSDGEYLMTAECKAEEELVLAMKNNDekgLSEVKESSCFRFLHRAIKDMVAKFEVHADELEED 393
                 55555555.66654.4567778******************************************99999999999999777999************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.37s 00:00:01.16 Elapsed: 00:00:00.52
# Mc/sec: 2106.03
//
Query:       MMETSP1325-20131115|9985_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-19   69.7   0.7    1.2e-09   38.4   0.1    2.1  2  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   3.4e-11   4.6e-07      27      56 ..       6      39 ..       2      84 .. 0.67
   2 !   38.4   0.1     9e-14   1.2e-09       9      94 ..      94     188 ..      85     218 .. 0.62

  Alignments for each domain:
  == domain 1    score: 30.0 bits;  conditional E-value: 3.4e-11
                TTTT--------TTT--------------....- CS
  PF00504.16 27 krlreaEliHGRvAMlavlGalvpelltk....l 56
                 ++ e+E++HGR+AM+++lG++++el  +     
  MMETSP1325-20131115|9985_1  6 YFYMESEVKHGRLAMIGALGWIAAELNSGecapN 39
                6899*********************665433220 PP

  == domain 2    score: 38.4 bits;  conditional E-value: 9e-14
                 XXXXXXXXXXXX.---.....-TTTTT--------TTT------------------S--TT--....STT---.-..---S-TT.THHHH---HHHH CS
  PF00504.16   9 lpgdlgfDplglskdp.....tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpa...waeagg.l..slptllalqillligflela 94 
                 ++g++ fDpl+l k       + + +r  E+ HGR AM++ + +++ e++t+++ +s fa +     wa  g  +  +   +++l   +++g+l ++
  MMETSP1325-20131115|9985_1  94 VAGNYDFDPLNLYKALgddaaGRRSMRDLEIAHGRTAMMGLTSWVLFEAVTGVPITS-FAAIFFkpfWA-WGLpFlgENGFIGTLEFAAIMGALGYK 188
                 589999******953366789999****************************87644.44443346333.331221122222332233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 971.86
//
Query:       MMETSP1325-20131115|9987_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.089   12.3   0.1       0.24   10.9   0.0    1.7  2  PF06034.6 Nucleopolyhedrovirus protein of unknown function (DUF919)


Domain annotation for each model (and alignments):
>> PF06034.6  Nucleopolyhedrovirus protein of unknown function (DUF919)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.7e-05      0.24      43      60 ..      28      45 ..      25      48 .. 0.89
   2 ?   -1.2   0.0      0.11   1.4e+03       8      18 ..      48      58 ..      43      60 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.7e-05
   PF06034.6 43 lekklnklRqeFLnfgvk 60
                ++++l + Rq+FLnf   
  MMETSP1325-20131115|9987_1 28 IDNELCDTRQSFLNFCQA 45
                799************865 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.11
   PF06034.6  8 qqLdeinqaKr 18
                 q de+ +aK+
  MMETSP1325-20131115|9987_1 48 YQFDELRRAKH 58
                58899999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 291.92
//
Query:       MMETSP1325-20131115|9986_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-19   69.8   0.1    2.3e-19   69.3   0.0    1.2  1  PF02310.14 B12 binding domain
    2.3e-11   43.4   0.0    4.1e-11   42.6   0.0    1.5  1  PF02607.12 B12 binding domain


Domain annotation for each model (and alignments):
>> PF02310.14  B12 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.0   3.4e-23   2.3e-19       2      95 ..      68     161 ..      67     171 .. 0.91

  Alignments for each domain:
  == domain 1    score: 69.3 bits;  conditional E-value: 3.4e-23
  PF02310.14   2 kvvlatvggdvhplGlayvaaalraaGfeveildanvenedivealaaeepdvvglSalftssleaakelaraakrvrprvkvvvGGahvtaap 95 
                 kv++atv+gdvh++G+++va +l  + f+v+++++ ++ e+i+ea +++++dvvglS l t+sl+++  +a++ ++++   ++++GGa  + ++
  MMETSP1325-20131115|9986_1  68 KVLMATVKGDVHDIGKNIVAVVLGCNNFKVYDIGVMCSCESIIEATKKYNVDVVGLSGLITPSLDEMIFVAKEFEKAGLTQPILIGGATTSKMH 161
                 89***********************************************************************55555666******8766555 PP

>> PF02607.12  B12 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.0     6e-15   4.1e-11      45      79 .]       3      37 ..       1      37 [. 0.95

  Alignments for each domain:
  == domain 1    score: 42.6 bits;  conditional E-value: 6e-15
  PF02607.12 45 amrevGdlwergeislpqehlsaevmkralaalep 79
                +m+ vGdl+++g+++lpq+++sa+vmk+a+a+l p
  MMETSP1325-20131115|9986_1  3 GMNVVGDLFGAGKMFLPQVIKSARVMKKAVAYLMP 37
                8*******************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.34s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 930.35
//
Query:       MMETSP1325-20131115|9989_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00041   19.6   0.0     0.0005   19.3   0.0    1.1  1  PF01740.16 STAS domain


Domain annotation for each model (and alignments):
>> PF01740.16  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.7e-08    0.0005      50      99 ..       2      51 ..       1      56 [. 0.94

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 3.7e-08
                EEEEE----S-B-----------HHHHHT----EEEES--HHHHHHHHH- CS
  PF01740.16 50 slildlsavsfiDssGvraLkeilkelkrrgvevvlvnlkpevreklekt 99
                ++i+d+ +  ++D++G++a++++++++ +++ +v++  l+ e + +l+++
  MMETSP1325-20131115|9989_1  2 HVIMDFMEARVLDYTGMQAINQVCSRYGSQDKTVIIKHLSAECASMLRAL 51
                8***************************************9999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|9981_1  [L=1544]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-96  320.9   0.0    1.1e-95  320.1   0.0    1.4  1  PF00225.18 Kinesin motor domain
     0.0013   16.4  47.4     0.0024   15.5  32.8    1.3  1  PF01576.14 Myosin tail
  ------ inclusion threshold ------
        4.3    6.3  14.6        1.7    7.6   3.0    2.8  3  PF04582.7  Reovirus sigma C capsid protein


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  320.1   0.0   2.3e-99   1.1e-95       1     335 []    1089    1418 ..    1089    1418 .. 0.87

  Alignments for each domain:
  == domain 1    score: 320.1 bits;  conditional E-value: 2.3e-99
                  EE---SHHHHHTTCEBEEEEESS....EEEEEEEECCTTTCCTEEEEEESEEEETTS-HHHHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-.TTTTC---HHHHHHHH..HHHHHCCTTTHTEEEEEEEEEEEEETTEEEETTSTTTTS-SS.BEEEECTTTCCEEECT---EEE..SSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT.TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
  PF00225.18    1 Rvrplnekekeekseeevevees....kkeeekkskkenkeekekeftFdkvfdeeatqeevyeelakplvesvleGynvtifaYGqtgsGKTytmeGkeeeeekGiipraleel..FeeieeekeekekefsvkvsylEiYnekiyDLLesekekkkkklkiredskkgkvyvkgltevev..ksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaenkkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakni 335 
                  Rvrp+ + +  + ++++  +++      + e  k +++ + e++++++Fdk+f+ ++ qee+++e+ +++v+s+l+Gynv++f YGqtgsGKT+tm+G+ + e++Giipra+e++  ++e+++   +    ++++v+++EiYne +yDLL++e+  +k++l+i++d+k  k+yv+g + v v  ++ +++ +l+++++ +r+++st++n++SSRSH++ft++l+  n e+ ++      ++l+L+DLAGsEr++++ga e++rlkEa nINkSL++L +v ++La++  ++++p+R+SkLT lLq++L+g+ kt+m+v++sp+++++ e+l++Lrfa++++++
  MMETSP1325-20131115|9981_1 1089 RVRPFLPGDGVDLEADNKPTTTCkndgVTAEIVKLDDTGSIEDSHSWEFDKTFAGADGQEEIFTEV-SEFVQSALDGYNVCLFSYGQTGSGKTHTMQGSGHGEQRGIIPRAIEQIgvYRELMK--PK-GWVYQMHVTFIEIYNEIVYDLLREET-AEKNELDIKQDTKG-KTYVHGANMVLVdpTDKQQIDDLMDTAALHRATSSTNMNAQSSRSHSVFTLHLQGVNDEQGAR----IKGQLHLCDLAGSERIARSGA-EGDRLKEAININKSLSCLTDVFNSLAQK--QAYIPFRNSKLTYLLQPALSGDGKTMMFVNLSPTNESYFESLCSLRFASNVNQV 1418
                  66666665555555444444432223456666777778888999*********************5.********************************9999***********844555555..33.679********************996.55566*******95.6****99988763368899************************************99665544....579*****************5.6888************************..*************************************************99876 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5  32.8   5.3e-07    0.0024     190     464 ..     765    1057 ..     744    1089 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 5.3e-07
  PF01576.14  190 selkvkldelqrqlndltskksrlqsEnseLtrqleeaeaq.vsnlsklksqlesqL...eeakrslee.esrerakLqaklrq...lesdldslreqleeeseakaelerqlskanaeiaqwrskfeeegaaraeelEelkkklekkisel.............eeave.aleakasslekaKsrlqseledlqielera....naaaselekkqknfdkvlaElkkkvdelqaeldtaqrearelstellklkneleelkdkveaLerenkkLqdeikdlteqlgeagrnvheLekarr 464 
                  +e k k++     +  l+ +   +++E    +r+ e+ e++  ++l+ lk+ l++ L   +e++r++e  es +r++L   ++     e++ ++l e++   ++ k+++  +l++++    ++ +k + e a +++e+E+++k+  +  ++l             ee++  ++ a   ++   ++++++e+++ ++ele++    +a+++e+e ++k+ d +l+E++kk+  l+ e+ +++  + ++s+e+ kl     e++ +v++L  +  +Lq+e++d+  +     +++ e++++  
  MMETSP1325-20131115|9981_1  765 QEFKDKINRRDELIRALQDALGTINAERVRFQRACEDVESHhQDELQELKQHLAMALtsfQELQRASEHrESEMREALRGAVERsskFENEKAALLESM---NDQKSNAAVALKEVEML-REAVQKQQGEIATKTQEFEDARKRFSQVKEALtvernlraraeikEEQMRqETIAITGQMHAIRNKMTGEVQVSSKELEDKtaelQATIKEMEDSKKENDTLLEEERKKCTILTGEVLSLKESLESKSSEASKLATL-AEKAGQVDGLLADVERLQKELEDTSGAST---KKMEEMQAIID 1057
                  445555555555555556667778888888888888877651456777888887766222577888775477788888887765101455555555555...56677777778877764.4555678899*************9877554432211111111111222220222334578899****************872222567889*******************************************865.566789************99988766544...44555544333 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.7    0.0026        12      30     120 ..     821     911 ..     815     937 .. 0.87
   2 ?    7.6   3.0   0.00036       1.7      27     110 ..     937    1021 ..     928    1056 .. 0.80
   3 ?   -2.8   0.0      0.53   2.4e+03      65     139 ..    1354    1431 ..    1339    1441 .. 0.61

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0026
   PF04582.7  30 ltavyerltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqte 120
                 lt+ +e   a e     ++e++  ++++ s+ + +   + +s++d k++     +ev+ l+++v++   e+a  ++  ++  + +s++++ 
  MMETSP1325-20131115|9981_1 821 LTSFQELQRASEHRESEMREALRGAVERSSKFENEKAALLESMNDQKSNAAVALKEVEMLREAVQKQQGEIATKTQEFEDARKRFSQVKEA 911
                 566666666777888889999999***************************************************9999999999998864 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.00036
   PF04582.7   27 pGdltavyerlt.aleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsah 110 
                  +G + a+++++t +++ +++ l++  +++ +++ +++   ++  + l++ + + + l+ ev +l++s++s sse ++l++l+++ 
  MMETSP1325-20131115|9981_1  937 TGQMHAIRNKMTgEVQVSSKELEDKTAELQATIKEMEDSKKENDTLLEEERKKCTILTGEVLSLKESLESKSSEASKLATLAEKA 1021
                  68899999999846899999******************9999999****************************999999887543 PP

  == domain 3    score: -2.8 bits;  conditional E-value: 0.53
   PF04582.7   65 lqdvtsslddvkaelkelstevaal.qs..svdslsseladlselvsahdaalsslqtevdanstdisnlksdvsang 139 
                  l dv +sl++ +a +   +++++ l q   s d  +    +ls + ++  ++l+sl+  ++ n +++     +vs  +
  MMETSP1325-20131115|9981_1 1354 LTDVFNSLAQKQAYIPFRNSKLTYLlQPalSGDGKTMMFVNLSPTNESYFESLCSLRFASNVNQVELGKAVKNVSEMS 1431
                  556666666666666666666655413311334444555677777777777888888887777777776666666443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1544 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1387  (0.101448); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 2.62u 0.39s 00:00:03.01 Elapsed: 00:00:01.13
# Mc/sec: 3245.59
//
Query:       MMETSP1325-20131115|9991_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.42s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 463.64
//
Query:       MMETSP1325-20131115|9992_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       285  (0.0208455); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.44s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 474.48
//
Query:       MMETSP1325-20131115|9994_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.44s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|9995_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-32  110.5   0.1      9e-32  109.7   0.1    1.3  1  PF00232.13 Glycosyl hydrolase family 1


Domain annotation for each model (and alignments):
>> PF00232.13  Glycosyl hydrolase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.7   0.1   6.6e-36     9e-32     328     454 ..       7     152 ..       2     153 .. 0.92

  Alignments for each domain:
  == domain 1    score: 109.7 bits;  conditional E-value: 6.6e-36
                 --B----SBB-.HHHHHHHHHHHHHTTT---EEEEEB----B--CSSHHC--HHHHHHHHHHHHHHHHHH.H----B----BB-SB----TT----S----EEEET.................TTTSEEEE-HHHHHHHHHHHHTE CS
  PF00232.13 328 lpktdsaweie.peglrkllellkekYenlpiyiteNGlglkdeveegkveDdkRidYlkehlnevkkai.edgvdlrgYfawsllDnfewakgyskrfGlvyvdf.................detqeRtpkeSakwykeviekng 454
                  p+++s w     +glrkll++++ +Y+n++i+ite G +l  ++  ++ +D +R  Y++++ +e+ ++i edgv+++gYfawsl+Dnfew +gy +rfG+++ df                    q Rtpk+Sa w++++ ++n+
  MMETSP1325-20131115|9995_1   7 FPQAESIWLFGaGWGLRKLLNWVNLRYGNPDIFITEGGWSLPADTAAEAQHDIDRTAYYANYTSEILNSIvEDGVNVKGYFAWSLMDNFEWERGYVERFGVIFNDFafgtdentaanqthqptAGAQVRTPKDSACWLSQLWQTNA 152
                 6889999999889*******************************************************999**********************************99999998888766555545688***********9998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 766.83
//
Query:       MMETSP1325-20131115|9996_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        7.2    6.5   6.9        4.1    7.3   2.2    2.5  2  PF07589.6 PEP-CTERM motif


Domain annotation for each model (and alignments):
>> PF07589.6  PEP-CTERM motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   2.2    0.0003       4.1       7      25 .]      98     114 ..      98     114 .. 0.90
   2 ?   -1.4   0.1      0.16   2.2e+03      13      20 ..     136     143 ..     134     150 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0003
   PF07589.6   7 tlaLlglGLaglgalrrRR 25 
                 +laLl ++L+g+++  rR+
  MMETSP1325-20131115|9996_1  98 SLALLXMALGGVAL--RRK 114
                 79************..665 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.16
   PF07589.6  13 lGLaglga 20 
                 ++La++++
  MMETSP1325-20131115|9996_1 136 VALAAVFL 143
                 66777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 802.26
//
Query:       MMETSP1325-20131115|9997_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-26   87.6  19.9    6.8e-07   28.0   0.5    4.3  4  PF00036.27 EF hand
    2.6e-21   73.4  10.7      2e-05   23.9   0.1    4.4  4  PF13405.1  EF-hand domain
    9.4e-21   73.6   7.1    6.9e-10   38.8   0.5    2.5  2  PF13499.1  EF-hand domain pair
    2.6e-19   67.4  19.0    1.2e-05   24.2   0.1    4.3  4  PF13202.1  EF hand
    4.6e-16   58.0  17.2    0.00013   21.3   0.0    4.4  4  PF13833.1  EF-hand domain pair
    1.8e-05   24.3  12.3       0.62    9.7   0.0    4.9  5  PF12763.2  Cytoskeletal-regulatory complex EF hand
     0.0014   18.5   0.3        2.2    8.2   0.1    2.5  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.6   1.1e-08   2.2e-05       2      27 ..      15      40 ..      14      42 .. 0.90
   2 !   25.8   0.0   1.7e-09   3.4e-06       3      27 ..      48      72 ..      47      74 .. 0.90
   3 !   28.0   0.5   3.5e-10   6.8e-07       2      28 ..      83     109 ..      82     110 .. 0.93
   4 !   21.7   1.5   3.6e-08   7.1e-05       3      25 ..     122     144 ..     120     148 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 1.1e-08
                HHHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealk 27
                lk+ F+++D D++G I+ eEf e+l 
  MMETSP1325-20131115|9997_1 15 LKRKFEMIDIDNSGSIDSEEFFEMLG 40
                6778********************96 PP

  == domain 2    score: 25.8 bits;  conditional E-value: 1.7e-09
                HHHHHHHCTTTSSEBEHHHHHHHHH CS
  PF00036.27  3 keaFkefDkDgdGkIsfeEfkealk 27
                + +F+++D Dg+G+I+f+E++++l 
  MMETSP1325-20131115|9997_1 48 DALFALIDADGSGTIDFDEYVRVLI 72
                578******************9986 PP

  == domain 3    score: 28.0 bits;  conditional E-value: 3.5e-10
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
  PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                 lk  F+ fD+Dg+G+I+  Ef+e++k+
  MMETSP1325-20131115|9997_1  83 LKFCFDFFDVDGSGTIDEAEFIELCKT 109
                 7889********************996 PP

  == domain 4    score: 21.7 bits;  conditional E-value: 3.6e-08
                 HHHHHHHCTTTSSEBEHHHHHHH CS
  PF00036.27   3 keaFkefDkDgdGkIsfeEfkea 25 
                  +a+++fD++ dG I+f+Ef+e+
  MMETSP1325-20131115|9997_1 122 ANAIEMFDVNDDGLIDFSEFVEI 144
                 5799****************997 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   2.8e-07   0.00054       2      27 ..      15      40 ..      14      43 .. 0.93
   2 !   20.8   0.1     1e-07    0.0002       4      26 ..      49      71 ..      47      74 .. 0.92
   3 !   23.9   0.1     1e-08     2e-05       2      27 ..      83     108 ..      82     116 .. 0.90
   4 !   13.6   0.2   2.1e-05     0.041       7      24 ..     126     143 ..     120     144 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 2.8e-07
                HH---GCC-------B---HHHHHHH CS
   PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                l++ F+++D d++G id eE+  +L 
  MMETSP1325-20131115|9997_1 15 LKRKFEMIDIDNSGSIDSEEFFEMLG 40
                799******************99986 PP

  == domain 2    score: 20.8 bits;  conditional E-value: 1e-07
                ---GCC-------B---HHHHHH CS
   PF13405.1  4 eaFklfDkdgdGkidaeELrdaL 26
                ++F l+D dg+G+id++E +++L
  MMETSP1325-20131115|9997_1 49 ALFALIDADGSGTIDFDEYVRVL 71
                79****************99988 PP

  == domain 3    score: 23.9 bits;  conditional E-value: 1e-08
                 HH---GCC-------B---HHHHHHH CS
   PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLr 27 
                 l+ +F+ fD dg+G+id +E++ +++
  MMETSP1325-20131115|9997_1  83 LKFCFDFFDVDGSGTIDEAEFIELCK 108
                 6789*****************99887 PP

  == domain 4    score: 13.6 bits;  conditional E-value: 2.1e-05
                 GCC-------B---HHHH CS
   PF13405.1   7 klfDkdgdGkidaeELrd 24 
                 ++fD + dG id++E++ 
  MMETSP1325-20131115|9997_1 126 EMFDVNDDGLIDFSEFVE 143
                 79**************86 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.6   7.4e-13   1.4e-09       2      64 ..      15      69 ..      11      71 .. 0.93
   2 !   38.8   0.5   3.5e-13   6.9e-10       2      65 ..      83     144 ..      79     144 .. 0.93

  Alignments for each domain:
  == domain 1    score: 37.7 bits;  conditional E-value: 7.4e-13
   PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64
                lk+ F+++D d++g++d ee+ ++l         e+   + d++f+ +D +g+G+++f+E++ 
  MMETSP1325-20131115|9997_1 15 LKRKFEMIDIDNSGSIDSEEFFEML--------GEQRSPFTDALFALIDADGSGTIDFDEYVR 69
                6789*********************........8888999********************985 PP

  == domain 2    score: 38.8 bits;  conditional E-value: 3.5e-13
   PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels..deevrevldyifkelDkngdGvlsfeEflqa 65 
                 lk +F+ +D+dg+g++d +e+ +l+k  ++     +++  +     ++++D n dG+++f+Ef+++
  MMETSP1325-20131115|9997_1  83 LKFCFDFFDVDGSGTIDEAEFIELCKTVNNAAPmfPGNFANA----IEMFDVNDDGLIDFSEFVEI 144
                 5668*************************9988889999999....*****************985 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.6   6.7e-07    0.0013       3      24 ..      18      38 ..      15      39 .. 0.86
   2 !   24.2   0.1   6.2e-09   1.2e-05       3      24 ..      49      70 ..      47      72 .. 0.89
   3 !   19.8   0.4   1.5e-07    0.0003       5      24 ..      87     106 ..      83     107 .. 0.91
   4 !   16.7   0.7   1.5e-06    0.0029       5      22 ..     125     142 ..     122     148 .. 0.86

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 6.7e-07
                HHHHHH--S----B-HHHHHHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreELkrl 24
                + F+ +D +++G I+ eE+ ++
  MMETSP1325-20131115|9997_1 18 K-FEMIDIDNSGSIDSEEFFEM 38
                6.*****************775 PP

  == domain 2    score: 24.2 bits;  conditional E-value: 6.2e-09
                HHHHHH--S----B-HHHHHHH CS
   PF13202.1  3 dtFrafDlNgDGkIsreELkrl 24
                ++F  +D++g+G+I+++E+ r+
  MMETSP1325-20131115|9997_1 49 ALFALIDADGSGTIDFDEYVRV 70
                68****************9885 PP

  == domain 3    score: 19.8 bits;  conditional E-value: 1.5e-07
                 HHHH--S----B-HHHHHHH CS
   PF13202.1   5 FrafDlNgDGkIsreELkrl 24 
                 F+ fD++g+G+I+  E+ +l
  MMETSP1325-20131115|9997_1  87 FDFFDVDGSGTIDEAEFIEL 106
                 99***************875 PP

  == domain 4    score: 16.7 bits;  conditional E-value: 1.5e-06
                 HHHH--S----B-HHHHH CS
   PF13202.1   5 FrafDlNgDGkIsreELk 22 
                  + fD+N DG I+++E+ 
  MMETSP1325-20131115|9997_1 125 IEMFDVNDDGLIDFSEFV 142
                 578*************95 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   2.1e-06    0.0041      31      51 ..      19      39 ..       3      42 .. 0.80
   2 !   21.3   0.0   6.8e-08   0.00013      28      53 ..      48      73 ..      47      74 .. 0.92
   3 !   16.0   1.0   3.1e-06     0.006      29      50 ..      85     106 ..      76     108 .. 0.83
   4 !   13.0   0.9   2.6e-05     0.052      31      48 ..     125     142 ..     120     144 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 2.1e-06
   PF13833.1 31 frefDtdgdGkisfeEFcvll 51
                f ++D+d++G i+ eEF ++l
  MMETSP1325-20131115|9997_1 19 FEMIDIDNSGSIDSEEFFEML 39
                8899**************997 PP

  == domain 2    score: 21.3 bits;  conditional E-value: 6.8e-08
   PF13833.1 28 dilfrefDtdgdGkisfeEFcvller 53
                d+lf ++D+dg+G i+f+E++++l +
  MMETSP1325-20131115|9997_1 48 DALFALIDADGSGTIDFDEYVRVLIS 73
                89*******************99875 PP

  == domain 3    score: 16.0 bits;  conditional E-value: 3.1e-06
   PF13833.1  29 ilfrefDtdgdGkisfeEFcvl 50 
                   f+ fD dg+G i+++EF++l
  MMETSP1325-20131115|9997_1  85 FCFDFFDVDGSGTIDEAEFIEL 106
                 559****************986 PP

  == domain 4    score: 13.0 bits;  conditional E-value: 2.6e-05
   PF13833.1  31 frefDtdgdGkisfeEFc 48 
                 + +fD ++dG i+f EF+
  MMETSP1325-20131115|9997_1 125 IEMFDVNDDGLIDFSEFV 142
                 679**************8 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00032      0.62      35      66 ..       7      36 ..       2      40 .. 0.82
   2 !    6.6   0.1    0.0028       5.5      47      66 ..      49      68 ..      42      78 .. 0.86
   3 ?    4.5   0.1     0.013        25      41      67 ..      79     105 ..      71     120 .. 0.86
   4 !    7.9   0.4    0.0011       2.2      47      67 ..     123     143 ..     107     153 .. 0.83
   5 ?    0.3   0.0      0.26     5e+02       5      28 ..     181     204 ..     178     224 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00032
   PF12763.2 35 lknskleedklekiwdladidedgkldfeefc 66
                l +s+l+   l++ +++ did+ g++d eef 
  MMETSP1325-20131115|9997_1  7 LTDSQLR--TLKRKFEMIDIDNSGSIDSEEFF 36
                5566665..588999***************95 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0028
   PF12763.2 47 kiwdladidedgkldfeefc 66
                 ++ l d d  g++df+e++
  MMETSP1325-20131115|9997_1 49 ALFALIDADGSGTIDFDEYV 68
                578899************97 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.013
   PF12763.2  41 eedklekiwdladidedgkldfeefci 67 
                 +ed l+  +d+ d+d  g++d  ef+ 
  MMETSP1325-20131115|9997_1  79 KEDILKFCFDFFDVDGSGTIDEAEFIE 105
                 678899999************999975 PP

  == domain 4    score: 7.9 bits;  conditional E-value: 0.0011
   PF12763.2  47 kiwdladidedgkldfeefci 67 
                 +  ++ d+++dg +df ef+ 
  MMETSP1325-20131115|9997_1 123 NAIEMFDVNDDGLIDFSEFVE 143
                 556789*************85 PP

  == domain 5    score: 0.3 bits;  conditional E-value: 0.26
   PF12763.2   5 eeleikkyweifsglkpednkltg 28 
                  ++ i++y e+  g +p d+ +t+
  MMETSP1325-20131115|9997_1 181 RQQRINEYMELHGGKEPPDSVMTK 204
                 678999*********999998876 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0014       2.7      56     111 ..      15      68 ..       6      70 .. 0.91
   2 !    8.2   0.1    0.0011       2.2      53     111 ..      80     142 ..      74     144 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0014
   PF10591.4  56 veWkFnqlDtnkdkvlsksElaplraplvklehCikeffksCDadkdkkisleEWc 111
                 ++ kF+ +D ++ ++++ +E+ ++  +  +    ++ +f   Dad  ++i+++E+ 
  MMETSP1325-20131115|9997_1  15 LKRKFEMIDIDNSGSIDSEEFFEMLGE--QRSPFTDALFALIDADGSGTIDFDEYV 68 
                 6679********************999..9999*********************97 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0011
   PF10591.4  53 keaveWkFnqlDtnkdkvlsksElaplraplvklehCi.....keffksCDadkdkkisleEWc 111
                 ++ +++ F+ +D++  + ++++E+ +l + + ++ + +     ++ +++ D+++d+ i+++E+ 
  MMETSP1325-20131115|9997_1  80 EDILKFCFDFFDVDGSGTIDEAEFIELCKTV-NNAAPMfpgnfANAIEMFDVNDDGLIDFSEFV 142
                 5678999********************9995.444333111114557788************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1118.30
//
Query:       MMETSP1325-20131115|9998_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 443.58
//
Query:       MMETSP1325-20131115|9993_1  [L=31]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (31 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 151.61
//
Query:       MMETSP1325-20131115|9999_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00017   21.6   7.6    0.00037   20.6   5.3    1.5  1  PF06005.7  Protein of unknown function (DUF904)
    0.00044   20.4   4.4    0.00077   19.6   3.1    1.4  1  PF06156.8  Protein of unknown function (DUF972)
     0.0028   17.6   3.9     0.0057   16.6   2.7    1.5  1  PF13747.1  Domain of unknown function (DUF4164)
     0.0072   15.6   4.3     0.0072   15.6   3.0    1.5  2  PF06810.6  Phage minor structural protein GP20
  ------ inclusion threshold ------
      0.015   15.4   6.3      0.034   14.2   4.4    1.6  1  PF05531.7  Nucleopolyhedrovirus P10 protein
      0.023   13.5   1.5      0.033   12.9   1.1    1.3  1  PF14362.1  Domain of unknown function (DUF4407)
      0.025   14.0   1.3      0.049   13.0   0.9    1.5  1  PF10224.4  Predicted coiled-coil protein (DUF2205)
      0.031   13.7  10.3      0.068   12.6   7.2    1.6  2  PF04156.9  IncA protein
      0.031   13.7   2.9      0.057   12.8   2.0    1.3  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
      0.095   13.0   2.6       0.21   11.8   1.7    1.6  1  PF09177.6  Syntaxin 6, N-terminal
      0.097   12.4   6.5      0.033   13.9   2.7    1.5  2  PF07200.8  Modifier of rudimentary (Mod(r)) protein
       0.24   10.9   4.7       0.48    9.9   3.2    1.4  1  PF03962.10 Mnd1 family
       0.53   10.2   7.1          1    9.3   4.9    1.5  1  PF09304.5  Cortexillin I, coiled coil
       0.76    9.5   2.8        1.2    8.8   2.0    1.3  1  PF06103.6  Bacterial protein of unknown function (DUF948)
       0.95    9.3   5.2        9.6    6.1   0.4    2.3  2  PF01166.13 TSC-22/dip/bun family


Domain annotation for each model (and alignments):
>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   5.3     4e-07   0.00037       6      58 ..     184     236 ..     182     241 .. 0.94

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 4e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--- CS
   PF06005.7   6 leeLeskiqqAvdtialLqmeieeLkeeneqlkeeneeLeeenkklkeereaw 58 
                  +eL+++i+++ dt++ Lq+e++  k+ neql  +n +L+e+n  ++e+ +a 
  MMETSP1325-20131115|9999_1 184 MHELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQEDNADMREQLQAA 236
                 589********************************************998875 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   3.1   8.5e-07   0.00077       1      63 [.     182     244 ..     182     259 .. 0.84

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 8.5e-07
   PF06156.8   1 mdkkelfdklseleeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkke 63 
                 m  +el +++s+l+ ++++l+ee+++ k+  ++l+ +n +l+ +n+ +re+l+  + ++ + e
  MMETSP1325-20131115|9999_1 182 MAMHELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQEDNADMREQLQAARMQQGEVE 244
                 66789***********************************************99876433333 PP

>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.7   6.2e-06    0.0057       3      77 ..     177     255 ..     175     258 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 6.2e-06
   PF13747.1   3 teeleaalkrLeaaldsLesaverrleaerkrdeleaei..q..aldadrsrLaqeLdkaearaerleeanrEvsrrLk 77 
                 ++el  a+++L++ +++L + v + +e+ ++++ l++++  q  +l++d + + ++L +a+++  ++e+an++v+++++
  MMETSP1325-20131115|9999_1 177 SAELPMAMHELQTQISKLQDTVSDLQEEVNDQKTLNEQLiyQnfQLQEDNADMREQLQAARMQQGEVESANADVNDAIN 255
                 57888999************************99998886643479*****************************9998 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       4.8   4.4e+03      76      93 ..      95     112 ..      88     129 .. 0.42
   2 !   15.6   3.0   7.9e-06    0.0072      29      85 ..     184     240 ..     165     261 .. 0.78

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 4.8
   PF06810.6  76 aklkdlklnnaielalkk 93 
                 ++l d++ ++ +  al  
  MMETSP1325-20131115|9999_1  95 KELIDQQQQYSMLVALGS 112
                 333333333333333333 PP

  == domain 2    score: 15.6 bits;  conditional E-value: 7.9e-06
   PF06810.6  29 ldslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkkeeyeaklkdlklnn 85 
                 + +l++q+++  ++++dL+++v+d+++L++++   + + +++++++ ++l+  ++++
  MMETSP1325-20131115|9999_1 184 MHELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQEDNADMREQLQAARMQQ 240
                 6789****************************8777777767778888777776654 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   4.4   3.7e-05     0.034      12      53 ..     183     224 ..     180     255 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.7e-05
   PF05531.7  12 dikavddkVdalqqqvddvqenlpdvtelnekLdaqsaqLae 53 
                 + ++++++++ lq+ v d+qe+++d + lne+L  q+ qL+e
  MMETSP1325-20131115|9999_1 183 AMHELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQE 224
                 67899********************************99997 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.1   3.6e-05     0.033     131     216 ..     171     265 ..      93     284 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.6e-05
   PF14362.1 131 aslsaklaaltaeiaalqaeldeaqaevnaaeeevqceleGt.....ggtgvaGkGpvykekkealdaaqaeletlkaqldaaqaelean....k 216
                 +++s+  a+l  ++++lq++++++q++v +++eev+++ + +     ++ +++ +    +e+ +a   +q e+e+++a +++a+++  +     +
  MMETSP1325-20131115|9999_1 171 EYDSTGSAELPMAMHELQTQISKLQDTVSDLQEEVNDQKTLNeqliyQNFQLQEDNADMREQLQAARMQQGEVESANADVNDAINRGLGLdcdrE 265
                 46677778888899999*********************998877777777777777777777777777788888888886666665432244432 PP

>> PF10224.4  Predicted coiled-coil protein (DUF2205)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.9   5.4e-05     0.049      19      58 ..     185     224 ..     172     248 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 5.4e-05
   PF10224.4  19 qrlieqvleLqdsLedLseRveaVkeendKLeseNkvLqq 58 
                 ++l++q+ +Lqd+ +dL e v+  k  n+ L  +N  Lq+
  MMETSP1325-20131115|9999_1 185 HELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQE 224
                 57*****************************999988886 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.9   1.8e+03     145     170 ..      96     114 ..      78     130 .. 0.60
   2 ?   12.6   7.2   7.5e-05     0.068      78     138 ..     179     239 ..      94     273 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.9
   PF04156.9 145 eirelreeisdlkeevqelrselerl 170
                 e+        d++++  +l+   ++l
  MMETSP1325-20131115|9999_1  96 ELI-------DQQQQYSMLVALGSHL 114
                 222.......3335555555444444 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 7.5e-05
   PF04156.9  78 rlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerleslees 138
                 +l+  + e+++q+s+l++ +++l+e+++++++ +e+l  ++ +lqe++ + +e+l++++ +
  MMETSP1325-20131115|9999_1 179 ELPMAMHELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQEDNADMREQLQAARMQ 239
                 556677899*****************************************99999998865 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.0   6.2e-05     0.057      75     144 ..     178     245 ..     165     259 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.2e-05
   PF07106.8  75 nkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtk 144
                 ++l + ++el++++++l++++s+l++e ++ ++ l +e+l+ +  +l++  ++++e+L++ + +  ev+ 
  MMETSP1325-20131115|9999_1 178 AELPMAMHELQTQISKLQDTVSDLQEEVND-QKTL-NEQLIYQNFQLQEDNADMREQLQAARMQQGEVES 245
                 678889999999999999999999988765.3444.5555555555666666666666655544444333 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.7   0.00023      0.21      32      87 ..     175     235 ..     162     244 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00023
   PF09177.6  32 tsskelkeltkeLenalesiewdledLeeavsv...vekn..pekfglseeeisrRkqfva 87 
                 t s el  + +eL++++++++ +++dL+e+v+     +++   ++f+l+e+  + R+q+ a
  MMETSP1325-20131115|9999_1 175 TGSAELPMAMHELQTQISKLQDTVSDLQEEVNDqktLNEQliYQNFQLQEDNADMREQLQA 235
                 3568999999********************9862222222567889999998888887654 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       6.7   6.1e+03      66      77 ..     102     113 ..      92     132 .. 0.48
   2 ?   13.9   2.7   3.6e-05     0.033       9      63 ..     184     239 ..     181     279 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 6.7
                 HHHHHHHHHHHH CS
   PF07200.8  66 dkleelkkleek 77 
                 +++  l +l + 
  MMETSP1325-20131115|9999_1 102 QQYSMLVALGSH 113
                 233333333333 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 3.6e-05
                 HHHHHHH-HHHHHHGGGGS-.-TTT---HHHHHHHHHHHHHHH....HHHHHHHHH CS
   PF07200.8   9 LkeLlqdedkleefvkeldq.vqdlneekeellaqnesLaeenlekepqleelkaq 63 
                 ++eL+ + +kl++ v+ l++ v d+++  e+l+ qn +L e+n   ++ql++ + q
  MMETSP1325-20131115|9999_1 184 MHELQTQISKLQDTVSDLQEeVNDQKTLNEQLIYQNFQLQEDNADMREQLQAARMQ 239
                 57889999999998888877799999999999999999999999999999888865 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.2   0.00052      0.48      73     147 ..     179     253 ..     171     256 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00052
  PF03962.10  73 klkkeleelkqrikelqaeiekekkkreet.eereelleelkeleeelkklkkeleklakldpekveklkeeteva 147
                 +l   ++el+++i++lq+ +++ +++ +++ +  e+l+ +  +l+e + +++++l+ +a++ + +ve+ +++++ a
  MMETSP1325-20131115|9999_1 179 ELPMAMHELQTQISKLQDTVSDLQEEVNDQkTLNEQLIYQNFQLQEDNADMREQLQ-AARMQQGEVESANADVNDA 253
                 55566777888888888888888666555514455589999999999999999999.5666666777777776665 PP

>> PF09304.5  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   4.9    0.0011         1       6      78 ..     186     258 ..     183     280 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0011
   PF09304.5   6 eleasknelankLagLersledekvsqeeLakqkdeLksllasleaqkaerekrlrelqakidellknlekek 78 
                 el+++ ++l++ ++ L+++++d+k+ +e+L+ q  +L++  a +++q +    +  e+++   ++   +++  
  MMETSP1325-20131115|9999_1 186 ELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQEDNADMREQLQAARMQQGEVESANADVNDAINRGL 258
                 56677788899999**********************9999999998866655555666666555555555444 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.0    0.0013       1.2      21      75 ..     184     238 ..     179     253 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0013
   PF06103.6  21 lkklkktldevnktvkkltkqvdgitketeellaktnelleDvneKvetldpvfq 75 
                 +++l++ ++++++tv++l+++v+  ++  e+l+ +  +l+eD  +  e+l+    
  MMETSP1325-20131115|9999_1 184 MHELQTQISKLQDTVSDLQEEVNDQKTLNEQLIYQNFQLQEDNADMREQLQAARM 238
                 6788999***********************************9998888887655 PP

>> PF01166.13  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.4     0.011       9.6      18      42 ..     186     210 ..     184     214 .. 0.84
   2 ?    5.9   2.4     0.012        11      14      51 ..     203     240 ..     201     248 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.011
  PF01166.13  18 vLkeqIkeLeeknsklerEnellks 42 
                 +L++qI+ L++ +s l++E +  k+
  MMETSP1325-20131115|9999_1 186 ELQTQISKLQDTVSDLQEEVNDQKT 210
                 699***************9876665 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.012
  PF01166.13  14 eEVevLkeqIkeLeeknsklerEnellkslaspeqleq 51 
                 eEV+  k+  + L ++n++l++ n+ +++ ++   ++q
  MMETSP1325-20131115|9999_1 203 EEVNDQKTLNEQLIYQNFQLQEDNADMREQLQAARMQQ 240
                 99999999999*****************9998888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       957  (0.0699971); expected 273.4 (0.02)
Passed bias filter:                      479  (0.0350351); expected 273.4 (0.02)
Passed Vit filter:                       102  (0.0074605); expected 13.7 (0.001)
Passed Fwd filter:                        19  (0.0013897); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.83u 0.41s 00:00:01.24 Elapsed: 00:00:00.55
# Mc/sec: 1490.10
//
Query:       MMETSP1325-20131115|9988_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-10   38.3   0.0    7.6e-10   37.8   0.0    1.2  1  PF00240.18 Ubiquitin family
    4.9e-07   29.1  28.1    7.5e-07   28.5  19.5    1.3  1  PF05162.8  Ribosomal protein L41
     0.0049   16.4   0.0     0.0065   16.0   0.0    1.2  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   1.7e-13   7.6e-10      11      66 ..      31      87 ..      22      89 .. 0.95

  Alignments for each domain:
  == domain 1    score: 37.8 bits;  conditional E-value: 1.7e-13
                EECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BE.TTTSBTTTTTT-TTEEEEEEE CS
  PF00240.18 11 evepsdtvselKekieekegipvdqqrLiysGkvL.eDdrtlseyniqdgstlhlvl 66
                +++ + tv++lK+ +e+++ +p++ qrLi +  +L ++d +ls++++++g t++lv+
  MMETSP1325-20131115|9988_1 31 TISGDCTVAQLKMTVENETFVPAEFQRLIVASEQLsDEDACLSDCGLASGMTVELVM 87
                68999*******************************99*****************96 PP

>> PF05162.8  Ribosomal protein L41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5  19.5   1.7e-10   7.5e-07       1      23 [.     105     127 ..     105     129 .] 0.96

  Alignments for each domain:
  == domain 1    score: 28.5 bits;  conditional E-value: 1.7e-10
   PF05162.8   1 mrakWKkKRmRRLkrKRRKMRQR 23 
                 mr+kW kKR+RRL+rKRRKMR R
  MMETSP1325-20131115|9988_1 105 MRWKWNKKRTRRLQRKRRKMRMR 127
                 9********************88 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.4e-06    0.0065       1      71 [.      16      86 ..      16      87 .. 0.93

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.4e-06
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--T.TSBGGGSS--TTEEEEEE CS
   PF11976.3  1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdp.ndtvedldiedgdtidvv 71
                +++ ++++dg    + ++ d t+++L+    ++  +p+ e +rLi   e+L++ ++++ d ++  g t+++v
  MMETSP1325-20131115|9988_1 16 MQLLVRSPDGALSATTISGDCTVAQLKMTVENETFVPA-EFQRLIVASEQLSDeDACLSDCGLASGMTVELV 86
                799***********************************.************65156889*********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       659  (0.0482007); expected 273.4 (0.02)
Passed bias filter:                      434  (0.0317437); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 562.05
//
Query:       MMETSP1325-20131115|10001_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 587.34
//
Query:       MMETSP1325-20131115|10002_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-34  117.7   0.3    6.2e-34  117.6   0.2    1.0  1  PF12831.2  FAD dependent oxidoreductase
    2.5e-08   34.0   0.0    3.2e-08   33.7   0.0    1.1  1  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
    4.6e-06   25.6   4.0      0.002   16.9   0.5    2.1  2  PF00890.19 FAD binding domain
      5e-05   23.1   0.4    8.8e-05   22.3   0.3    1.4  1  PF13450.1  NAD(P)-binding Rossmann-like domain
    5.6e-05   22.0   3.5      0.051   12.3   0.1    2.6  3  PF01266.19 FAD dependent oxidoreductase
    8.3e-05   22.4   0.0    0.00011   22.0   0.0    1.3  1  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
    0.00078   18.4   1.9      0.014   14.4   1.3    2.1  1  PF01946.12 Thi4 family
     0.0012   17.7   0.5     0.0035   16.1   0.2    1.7  2  PF01134.17 Glucose inhibited division protein A
  ------ inclusion threshold ------
      0.041   12.2   0.5      0.059   11.7   0.3    1.2  1  PF03486.9  HI0933-like protein


Domain annotation for each model (and alignments):
>> PF12831.2  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.6   0.2   4.1e-37   6.2e-34       7     187 ..       2     175 ..       1     182 [] 0.86

  Alignments for each domain:
  == domain 1    score: 117.6 bits;  conditional E-value: 4.1e-37
    PF12831.2   7 GgpaGvaAAiaAarlGakvlLverrgvlGGmltsglvatddgnkdee.qvigglareflerlrergaa.kqeerkkwvseltfepevakevleemlaeagvtvllhtrlvsvekegdritavtvesksgrltirAkvfiDATgdGdlaalaGapyrvGresrseygepaagtlvfrldgvgdk 187
                  GgpaG+ AAiaA r+Ga+++L+er g++GG +t+ +  t+  ++ e+    +gl  e+ + ++++g+  k++ +++   e + + + +k v++++++e+gv+ +lh + v++ ++++++ +v++esksgr+++ Ak +iD+Tgd+d+a  aG+py++  ++++  g     ++vf+ +gv+++
  MMETSP1325-20131115|10002_1   2 GGPAGLSAAIAARRAGADTVLLERFGCFGGCITTVGMETLAWYRYEGtTDSEGLGVEMERLAAQMGGTiKWPYNDS---E-CLDADFFKLVADHLVQESGVRPYLHIMCVDALVREGKVVGVVTESKSGRKAVLAKRVIDCTGDADIANFAGVPYTMRPKDEA-LG----VSTVFNAAGVNKE 175
                  9************************************9999988888888999****9999988777656664444...2.8******************************99877*********99*****************************555554.33....4456666666554 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   2.1e-11   3.2e-08       5     163 ..       2     170 ..       2     178 .. 0.71

  Alignments for each domain:
  == domain 1    score: 33.7 bits;  conditional E-value: 2.1e-11
    PF13738.1   5 AGaaGlafadnlleegatpliivDrnakpGghwl.......kaysfvrlhqpsffssdfgvn..dleklsldsspkwrikael.asgeeisayledvarrlglk..vrlstrvteveregdrfevrvtdg...revrakalvlatgavskpktlglpg..sadkeavhleevlepe 163
                  +G+aGl +a++++ +ga+  ++++r   +Gg ++        +y++   ++++    ++gv+  +l++ +   + kw+ +++  ++++    + ++++++ g++  ++  + v++ +reg+   v ++++   + v ak+++++tg     + +g+p+  + ++ea+ +++v++++
  MMETSP1325-20131115|10002_1   2 GGPAGLSAAIAARRAGAD-TVLLERFGCFGGCITtvgmetlAWYRYEGTTDSE----GLGVEmeRLAA-QMGGTIKWPYNDSEcLDADFFKLVADHLVQESGVRpyLHIMC-VDALVREGKVVGVVTESKsgrKAVLAKRVIDCTGDADIANFAGVPYtmRPKDEALGVSTVFNAA 170
                  6*****************.59***88777777661111111566666665544....55555525544.55555588877655266777789***********99777765.*******999666665555777888*********766677777777654455778887777765 PP

>> PF00890.19  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.5   1.3e-06     0.002       7      37 ..       2      32 ..       2      43 .. 0.89
   2 !   10.4   0.1   0.00012      0.19     159     204 ..     102     143 ..      38     163 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 1.3e-06
                 ------HHHHHHHCHTT-EEEE-SS-CCGSG CS
   PF00890.19  7 sGlAGlaAAleaaeaglkvavvekeqetgga 37
                 +G AGl+AA++a++ag++++++e  + +gg 
  MMETSP1325-20131115|10002_1  2 GGPAGLSAAIAARRAGADTVLLERFGCFGGC 32
                 79*********************98888874 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00012
                  E-SEEEEE--BG--BB---EEEETTT-SEEEEEES.EEEE-----G CS
   PF00890.19 159 qerhradeLivedgrvtGvvvenprsgrevrirakaavvlatgGfg 204
                  ++ + +d+L++ +g+v+Gvv e  +++++ ++ ak +v+  tg + 
  MMETSP1325-20131115|10002_1 102 LHIMCVDALVR-EGKVVGVVTE--SKSGRKAVLAK-RVIDCTGDAD 143
                  44445667755.99********..8889999****.******9765 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.3   5.8e-08   8.8e-05       4      40 ..       2      38 ..       2      51 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 5.8e-08
    PF13450.1  4 aGlsGlvaAylLakagkdvlvlekrdrlGGraasvev 40
                 +G +Gl+aA ++++ag d ++le+   +GG++++v  
  MMETSP1325-20131115|10002_1  2 GGPAGLSAAIAARRAGADTVLLERFGCFGGCITTVGM 38
                 8*******************************99854 PP

>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.2   0.00018      0.28       7      32 ..       2      27 ..       2      35 .. 0.90
   2 !   12.3   0.1   3.3e-05     0.051     149     200 ..      84     140 ..      41     142 .. 0.83
   3 ?   -2.5   0.0       1.1   1.7e+03     187     208 ..     158     179 ..     148     180 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00018
                 ---HHHHHHHHHHHTT-EEEEEESSS CS
   PF01266.19  7 gGivGlstAyeLarrglkVtllekgd 32
                 gG +Gls+A+ + r+g++++lle+ +
  MMETSP1325-20131115|10002_1  2 GGPAGLSAAIAARRAGADTVLLERFG 27
                 899********************985 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 3.3e-05
                  HHHHHHHHH.HHG--EEEESEEEEEEEEETTCEE.EEEEES..EEE...EEEEE--- CS
   PF01266.19 149 lvkalaraa.eelGveiiegtkVtglereggrvsgvetedgs.ira...dkvvlAaG 200
                  + k +a+++ +e Gv+ + +   ++  + +g+v+gv+te++s  +a   ++v+ ++G
  MMETSP1325-20131115|10002_1  84 FFKLVADHLvQESGVRPYLHIMCVDALVREGKVVGVVTESKSgRKAvlaKRVIDCTG 140
                  5555665540566*************************99963333666*******9 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 1.1
                  ES.EEEEEEEE----THHHHHC CS
   PF01266.19 187 dgsiradkvvlAaGawsskllk 208
                  d+ ++ ++v +AaG++  ++lk
  MMETSP1325-20131115|10002_1 158 DEALGVSTVFNAAGVNKEEFLK 179
                  5556778999999998777765 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   7.2e-08   0.00011       7     120 ..       2     142 ..       2     175 .. 0.61

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 7.2e-08
                  ---HHHHHHHHHHHTTSEEEEECSSSSSTBTSGGHHHHHHHHHHHHHHHHHH.TSH.................................HHHHHHHH.CTCEEEHCHEEEEE.ETTTTEEEEEEEEEEEEEETEEEEEEESEEEE----B CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx.................................xxxxxxxx.xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    PF07992.9   7 gGpaGlsaakdlaqkglkvaliekeggtcvnrgclpkkllvevaegreelee.lal.................................kvvdelek.agieilleknvvki.dsgskkvvqeagavkadekgkgrdikydklviAtGar 120
                  gGpaGlsaa+ ++++g++++l+e+ g  c+ +gc+++  +   a  r e  + +++                                  v+d+l +  g++ +l   +v++  ++ k     +++v  + k+  + + +++++ +tG +
  MMETSP1325-20131115|10002_1   2 GGPAGLSAAIAARRAGADTVLLERFG--CF-GGCITTVGMETLAWYRYE-GTtDSEglgvemerlaaqmggtikwpyndsecldadffkLVADHLVQeSGVRPYLHIMCVDAlVREGK-----VVGVVTESKSGRKAVLAKRVIDCTGDA 142
                  8*********************8876..44.667766666444444444.44355568887776666666666666666666666666533333333355555555333444133333.....222223344445667777777777755 PP

>> PF01946.12  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   1.3   8.9e-06     0.014      25     170 ..       2     147 ..       1     171 [. 0.74

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 8.9e-06
                  ------HHHHHHHTSTS-EEEEESSS---------------EEEETTTHHHHHH-----EE-SSEE..EES....-H....HHHHHHHHHHHHT.TTEEEEETEEEEE-----.------EEEEHHHHT-..T---EE-EEEEEEE----------- CS
   PF01946.12  25 aGssGltaayylakkdlkvailerklsiGGGawlGGqlfskvvvrkeakelLdelgiryedegdyv..vvk....da....aeftstllskvlq.agvklfnavaveDlivrdgervaGvvinwtlvelaglhvDPlvieakvvvdatGhdaevvav 170
                  +G++Gl+aa    +++  +++ler   +GG +   G+   +   r e+    + lg+++e     +   +k    d+    a f   ++ +++q +gv+ +  ++  D +vr+  +v Gvv+++++  +a        + ak v+d tG da+++++
  MMETSP1325-20131115|10002_1   2 GGPAGLSAAIAARRAGADTVLLERFGCFGGCITTVGMETLAW-YRYEGTTDSEGLGVEMERLAAQMggTIKwpynDSecldADFFKLVADHLVQeSGVRPYLHIMCVDALVRE-GKVVGVVTESKSGRKA--------VLAKRVIDCTG-DADIANF 147
                  69*******999999*******************99986654.5666666667777777654332211232222244233356778888899999999977666666778888.7999****99988877........66788888888.6777766 PP

>> PF01134.17  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.2   2.3e-06    0.0035       7      58 ..       2      64 ..       2      77 .. 0.79
   2 ?   -0.6   0.0      0.28   4.3e+02     118     149 ..     107     140 ..      88     158 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.3e-06
                 ------HHHHHHHH----EEEE...........ES-GGG-----SSSEE-------HHHHHHH CS
   PF01134.17  7 gGhAGceAAlaaarlGakvlLi...........thkldtiaelsCnpsiggiakgllvrEida 58
                 gG AG+ AA+aa r+Ga+++L+           t  ++t+a+  +  +  +++ g  ++ + a
  MMETSP1325-20131115|10002_1  2 GGPAGLSAAIAARRAGADTVLLerfgcfggcitTVGMETLAWYRYEGTTDSEGLGVEMERLAA 64
                 8*********************99999999998888888888888888888877764444433 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.28
                  EEE--BSSSBB---EE----...B-EESEEEE--- CS
   PF01134.17 118 veeliveekkvkgvvtedge...tikakavviatG 149
                  v+ l v+e+kv gvvte+++   ++ ak v+  tG
  MMETSP1325-20131115|10002_1 107 VDAL-VREGKVVGVVTESKSgrkAVLAKRVIDCTG 140
                  5555.678999999998765111455556766666 PP

>> PF03486.9  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.3   3.9e-05     0.059       8      38 ..       2      32 ..       1      38 [. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.9e-05
    PF03486.9  8 gGaAGlmaAisaakrgakVllldkakklgrK 38
                 gG+AGl aAi+a ++ga+++ll++   +g  
  MMETSP1325-20131115|10002_1  2 GGPAGLSAAIAARRAGADTVLLERFGCFGGC 32
                 8**********************98777755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.57
# Mc/sec: 751.96
//
Query:       MMETSP1325-20131115|9990_1  [L=593]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0077   15.7   0.1      0.019   14.5   0.1    1.6  1  PF00013.24 KH domain
  ------ inclusion threshold ------
        0.1   12.2   0.1       0.24   11.0   0.1    1.7  1  PF13014.1  KH domain
        2.6    7.1   8.1       0.17   11.1   1.2    2.1  2  PF13598.1  Domain of unknown function (DUF4139)


Domain annotation for each model (and alignments):
>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   4.1e-06     0.019       8      28 ..     341     361 ..     337     365 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 4.1e-06
                 CCCCHHH---TTHHHHHHHHH CS
  PF00013.24   8 nskigriIGkgGsnIkeIeee 28 
                 ++ ig+ IGkgG nI +++ +
  MMETSP1325-20131115|9990_1 341 RRVIGTFIGKGGTNIAKLQAK 361
                 578***************987 PP

>> PF13014.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   5.4e-05      0.24       2      19 ..     344     361 ..     343     363 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.4e-05
   PF13014.1   2 vgliIGkgGetIkeIree 19 
                 +g +IGkgG +I +++++
  MMETSP1325-20131115|9990_1 344 IGTFIGKGGTNIAKLQAK 361
                 799************986 PP

>> PF13598.1  Domain of unknown function (DUF4139)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.2   3.7e-05      0.17     119     237 ..     225     339 ..     175     346 .. 0.67
   2 ?   -2.2   0.4      0.39   1.8e+03      57      90 ..     545     573 ..     529     586 .. 0.40

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3.7e-05
   PF13598.1 119 veksglsvtfkipgpvsvpsdgeahrvtiatetlpaeleyvavPkldeaAyltAevkntsglpllpGkasifldgafVgksrlelvapgeefelsfGvddavrverkllkk.kgetglis 237
                   ++ ls   +++ p+ +++  +++rv++ ++ +++ l++++v +  ++A+        ++       ++ +++     +srle+++++ +++lsf + ++  v+  ll++  ++++ + 
  MMETSP1325-20131115|9990_1 225 SLENMLS--VQLAYPYKLRKESDPVRVQVTKHAYKPALVITVVTSAVATAFAHSLYAGRKTTSAAGAGTEGLVEA---LQSRLEAAVESLRLRLSFERKTRFAVSEALLAQtDESARAVH 339
                 3344545..55666799**********************************877666665543333333333332...377777777777777777777777777777777445555555 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.39
   PF13598.1  57 rggsppelspwridlyrpepekrrareaapaara 90 
                 r+++ ++++++r + +r+ ++k     ++++ara
  MMETSP1325-20131115|9990_1 545 RRIREARINAQRSSKSRKGASK-----SRSRARA 573
                 2222222222222222222222.....2222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       626  (0.045787); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.95u 0.36s 00:00:01.31 Elapsed: 00:00:00.74
# Mc/sec: 1920.32
//
Query:       MMETSP1325-20131115|10003_1  [L=318]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.52
# Mc/sec: 1465.46
//
Query:       MMETSP1325-20131115|10004_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       477  (0.0348888); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|10005_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|10006_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 640.56
//
Query:       MMETSP1325-20131115|10007_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 541.40
//
Query:       MMETSP1325-20131115|10008_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-15   55.4   3.0    4.7e-07   29.7   0.7    2.3  2  PF00615.14 Regulator of G protein signaling domain
  ------ inclusion threshold ------
      0.012   14.9   1.3      0.028   13.8   0.9    1.6  1  PF12368.3  Protein of unknown function (DUF3650)
      0.016   14.8   0.5      0.016   14.8   0.3    1.6  2  PF13758.1  Prefoldin subunit
      0.022   14.8   0.7       0.12   12.4   0.5    2.2  1  PF02357.14 Transcription termination factor nusG
      0.048   13.1   0.4        2.6    7.6   0.0    2.5  2  PF06034.6  Nucleopolyhedrovirus protein of unknown function (DUF919)


Domain annotation for each model (and alignments):
>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.7   1.7e-10   4.7e-07       2      41 ..       9      52 ..       8     129 .. 0.82
   2 !   25.8   0.0   2.9e-09   7.9e-06      48     105 ..     148     205 ..     144     207 .] 0.92

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 1.7e-10
                 HHHHHTSS---HHHHHHHHTTTTHHHHHHHHHHHHHCTS....- CS
   PF00615.14  2 leslledqpgrslFreFlesefseenleFwlaveefkka....k 41
                 +e +l++++ +++F e ++sef+een+eFw a+  f++     k
  MMETSP1325-20131115|10008_1  9 IETILSHPEACRAFVEHMKSEFAEENVEFWSACRTFQRFftimK 52
                 789*********************************98766651 PP

  == domain 2    score: 25.8 bits;  conditional E-value: 2.9e-09
                  HHHHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS..--TTTTHHHHHHHHHHHTTHH CS
   PF00615.14  48 kkakeIynkylapsspkelnidkklreeleknlekaqpsrklfeeaqeevfrllekds 105
                   ++  +++k++ +++p ++ni+ + r+++ek+++++   +++f eaq ev++l+++d 
  MMETSP1325-20131115|10008_1 148 HQVVTLVTKFIVEGAPVQININAAHRQRIEKCVKENLFPSTIFVEAQLEVLDLMKTDV 205
                  56778999***************************988999**************995 PP

>> PF12368.3  Protein of unknown function (DUF3650)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.9     1e-05     0.028      13      27 ..     100     114 ..      99     115 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1e-05
    PF12368.3  13 eHnLSeEEvaeRLea 27 
                  +++L++EE +eRL+a
  MMETSP1325-20131115|10008_1 100 KQHLTDEEAEERLQA 114
                  78***********98 PP

>> PF13758.1  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.3   5.8e-06     0.016      23      88 ..      57     133 ..      32     137 .. 0.76
   2 ?   -3.2   0.1       2.3   6.4e+03      66      77 ..     147     158 ..     146     176 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 5.8e-06
    PF13758.1  23 elke........eddatkedllrirrdfegslv...nekeikeilgekqgvertkeqvvdlisrRiDyVkenietle 88 
                    +e         d+  +e+ll+i+ df g lv    e e ke+   +++   ++ q++  ++rR+D +++  + ++
  MMETSP1325-20131115|10008_1  57 VNEEepvlddivMDALREEQLLNIETDFTGLLVavaSESEFKEKQHLTDEEAEERLQAMVRMKRRMDIITNHADDMS 133
                  4444445555656778899************9944457888888777777788999************998777665 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 2.3
    PF13758.1  66 keqvvdlisrRi 77 
                  ++qvv l+++ i
  MMETSP1325-20131115|10008_1 147 RHQVVTLVTKFI 158
                  578888887755 PP

>> PF02357.14  Transcription termination factor nusG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.5   4.6e-05      0.12      30      64 ..     163     196 ..      87     205 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.6e-05
                  SEEEEEEHHHTT-.EEEE.EEECT----EEEEES-- CS
   PF02357.14  30 Pteevtevrkekgkkvkr.verplfpgYvFveadle 64 
                  P++  +    ++++++ + v+++lfp+ +Fvea+le
  MMETSP1325-20131115|10008_1 163 PVQININA--AHRQRIEKcVKENLFPSTIFVEAQLE 196
                  55554333..3455888889*************986 PP

>> PF06034.6  Nucleopolyhedrovirus protein of unknown function (DUF919)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0   0.00096       2.6       6      27 ..     108     129 ..     104     136 .. 0.85
   2 ?    3.1   0.0     0.024        64      19      36 ..     165     182 ..     163     184 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00096
    PF06034.6   6 LrqqLdeinqaKrkltiksqHf 27 
                   +++L+ ++++Kr++ i ++H 
  MMETSP1325-20131115|10008_1 108 AEERLQAMVRMKRRMDIITNHA 129
                  5789*****************7 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.024
    PF06034.6  19 kltiksqHfErlkkitKn 36 
                  +++i+  H  r++k  K+
  MMETSP1325-20131115|10008_1 165 QININAAHRQRIEKCVKE 182
                  899******999998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       884  (0.0646577); expected 273.4 (0.02)
Passed bias filter:                      564  (0.0412522); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.54
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|10009_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1212.56
//
Query:       MMETSP1325-20131115|10012_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       495  (0.0362054); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 753.85
//
Query:       MMETSP1325-20131115|10011_1  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.065   13.5   7.9       0.47   10.9   0.0    4.1  3  PF07721.9 Tetratricopeptide repeat
       0.65   10.6   7.6       0.59   10.7   0.6    3.3  3  PF13432.1 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.3      0.01        71       8      26 .]      73      91 ..      71      91 .. 0.86
   2 ?    0.1   0.3       0.2   1.4e+03       2      12 ..     161     171 ..     160     172 .. 0.68
   3 ?   10.9   0.0   6.9e-05      0.47       3      23 ..     193     213 ..     191     216 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.01
                 HHHHHH-------HHHHHT CS
    PF07721.9  8 ArallalGdldeAraller 26
                 A + + lGd+  Ar+ l+r
  MMETSP1325-20131115|10011_1 73 AALRFGLGDSVGARECLAR 91
                 5667889********9986 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.2
                  HHH---HHHHH CS
    PF07721.9   2 rallaLArall 12 
                  r ++++Ara+l
  MMETSP1325-20131115|10011_1 161 RPHFLQARAAL 171
                  67777788776 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 6.9e-05
                  HH---HHHHHH-------HHH CS
    PF07721.9   3 allaLArallalGdldeAral 23 
                  + l++Ar ll +G++ +A ++
  MMETSP1325-20131115|10011_1 193 CSLVRARILLMQGRPSQAVDA 213
                  5689**************876 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1     0.075   5.1e+02      28      57 ..      63      92 ..      45     100 .. 0.57
   2 ?    1.8   0.2     0.055   3.8e+02       4      42 ..      73     111 ..      70     135 .. 0.73
   3 ?   10.7   0.6   8.6e-05      0.59      30      56 ..     190     217 ..     160     219 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.075
    PF13432.1 28 PeaaeallllaeallrlgrldeAaallraa 57
                 P+     ++ a + + lg+  +A++ l++a
  MMETSP1325-20131115|10011_1 63 PLSSLTAMRSAALRFGLGDSVGARECLARA 92
                 556666666666666666666665444443 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.055
    PF13432.1   4 ArallraGdydeAlaaleaalalaPeaaeallllaeall 42 
                  A +++ +Gd   A+++l +a        ea+ +l +++ 
  MMETSP1325-20131115|10011_1  73 AALRFGLGDSVGARECLARAAPIGLSMHEAQHYLNDVAV 111
                  788889999999999999998777667777777776665 PP

  == domain 3    score: 10.7 bits;  conditional E-value: 8.6e-05
    PF13432.1  30 aaeallllaeallrlgrldeAa.allra 56 
                   a  +l +a++ll++gr+ +A+ a+l+a
  MMETSP1325-20131115|10011_1 190 KASCSLVRARILLMQGRPSQAVdAVLQA 217
                  6778899***************888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 1108.32
//
Query:       MMETSP1325-20131115|10013_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-17   61.4   3.6    9.8e-05   21.9   0.6    3.4  3  PF13418.1  Galactose oxidase, central domain
    1.2e-16   60.2   0.2    1.7e-05   24.7   0.1    3.2  3  PF13415.1  Galactose oxidase, central domain
    2.5e-12   46.2   0.8     0.0004   20.2   0.0    3.2  3  PF07646.10 Kelch motif
    1.6e-09   37.3   0.7     0.0042   17.0   0.0    3.3  3  PF13964.1  Kelch motif
    4.5e-09   35.9   0.5      0.026   14.4   0.0    3.3  3  PF13854.1  Kelch motif
    1.2e-06   27.8   3.6    0.00034   19.9   0.0    3.3  3  PF01344.20 Kelch motif
  ------ inclusion threshold ------
      0.048   12.2   0.0       0.18   10.3   0.0    1.8  2  PF03089.9  Recombination activating protein 2


Domain annotation for each model (and alignments):
>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   2.2e-07   0.00044      14      44 ..       1      35 [.       1      44 [. 0.89
   2 !   21.9   0.6     5e-08   9.8e-05       1      42 [.      45      96 ..      45     104 .. 0.84
   3 !   18.7   0.0     5e-07   0.00097       2      39 ..     107     142 ..     106     143 .] 0.89

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 2.2e-07
    PF13418.1 14 rlylfGGenedg....gplnDlyvfDlstntWtrl 44
                 r+++fGG++ +       +nD+  +D++t+ W+++
  MMETSP1325-20131115|10013_1  1 RILMFGGMSVNEgeipEYFNDFRALDTETMVWSKV 35
                 799********77********************98 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 5e-08
    PF13418.1  1 pRaghsavavpdgrlylfGGenedg........gplnDly.vfDlstntW.t 42
                 +R+ghs+++++ + ++lfGG +  g         +  D + v+D+ + tW  
  MMETSP1325-20131115|10013_1 45 SRYGHSLTQLGPDLMVLFGGWGLGGlqckqenaNRGADSFvVYDVPNSTWvV 96
                 59********99***********88********777777647********43 PP

  == domain 3    score: 18.7 bits;  conditional E-value: 5e-07
    PF13418.1   2 RaghsavavpdgrlylfGGenedggplnDlyvfDlstn 39 
                  R+gh+++  + ++l++fGG +++ ++ n l ++ l+++
  MMETSP1325-20131115|10013_1 107 RYGHTCTVMG-DSLFVFGGWTGK-QAVNTLTQIMLQDM 142
                  9*******96.6**********9.89999998888775 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   4.1e-07    0.0008       4      48 ..       2      53 ..       1      54 [. 0.84
   2 !   24.7   0.1   8.7e-09   1.7e-05       3      48 ..      58     114 ..      57     115 .. 0.82
   3 !   13.0   0.0   4.1e-05     0.079       1      21 [.     116     134 ..     116     142 .. 0.86

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 4.1e-07
    PF13415.1  4 lyvfGGlgd.dg..qtrlndvyvldldtntweei....gslPppRaghtata 48
                 +++fGG    +g   ++ nd+  ld++t+ w ++    ++ P+ R+gh++t+
  MMETSP1325-20131115|10013_1  2 ILMFGGMSVnEGeiPEYFNDFRALDTETMVWSKVraeaDEFPSSRYGHSLTQ 53
                 8999**888744335666**************999998889*********97 PP

  == domain 2    score: 24.7 bits;  conditional E-value: 8.7e-09
    PF13415.1   3 elyvfGGlgd.......dgqtrlndvy.vldldtntweei..gslPp.pRaghtata 48 
                   +++fGG+g        ++++r +d + v+d+ + tw     +s P   R+ght+t+
  MMETSP1325-20131115|10013_1  58 LMVLFGGWGLgglqckqENANRGADSFvVYDVPNSTWVVPamPSKPVdHRYGHTCTV 114
                  599*******99999996677776666599********5556777769*******98 PP

  == domain 3    score: 13.0 bits;  conditional E-value: 4.1e-05
    PF13415.1   1 gdelyvfGGlgddgqtrlndv 21 
                  gd+l+vfGG++  g ++ n++
  MMETSP1325-20131115|10013_1 116 GDSLFVFGGWT--GKQAVNTL 134
                  799********..99999887 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0     2e-07    0.0004      13      45 ..       1      35 [.       1      37 [. 0.96
   2 ?    3.5   0.0     0.038        74       2      21 ..      46      76 ..      45      95 .. 0.65
   3 !   19.6   0.0     3e-07   0.00059       2      20 ..     107     125 ..     106     135 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 2e-07
   PF07646.10 13 kiyvvGGa..htdngllsssdlnvldpeknvWeel 45
                 +i+++GG+  ++++ +++++d++ ld+e+ vW+++
  MMETSP1325-20131115|10013_1  1 RILMFGGMsvNEGEIPEYFNDFRALDTETMVWSKV 35
                 79*******************************97 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.038
   PF07646.10  2 ryghsav.vpggkiyvvGGa..........h 21
                 ryghs +  + + ++++GG+          +
  MMETSP1325-20131115|10013_1 46 RYGHSLTqLGPDLMVLFGGWglgglqckqeN 76
                 7777777555778999***977777776643 PP

  == domain 3    score: 19.6 bits;  conditional E-value: 3e-07
   PF07646.10   2 ryghsavvpggkiyvvGGa 20 
                  rygh+++v+g+ ++v+GG+
  MMETSP1325-20131115|10013_1 107 RYGHTCTVMGDSLFVFGGW 125
                  9*****************9 PP

>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00045      0.89      14      43 ..       2      35 ..       1      43 [. 0.88
   2 !    7.6   0.1    0.0021       4.2       2      47 ..      46     100 ..      45     104 .. 0.81
   3 !   17.0   0.0   2.1e-06    0.0042       1      30 [.     106     134 ..     106     139 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00045
    PF13964.1 14 iyifGGytns....gkylndvlvydpetksWeql 43
                 i +fGG +       +y+nd+  +d et++W+++
  MMETSP1325-20131115|10013_1  2 ILMFGGMSVNegeiPEYFNDFRALDTETMVWSKV 35
                 778888877779999*****************97 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0021
    PF13964.1   2 raghsavsvggki.yifGGytns.........gkylndvlvydpetksWeqlpplp 47 
                  r+ghs++  g  + ++fGG + +         ++ ++++ vyd+ + +W  +p +p
  MMETSP1325-20131115|10013_1  46 RYGHSLTQLGPDLmVLFGGWGLGglqckqenaNRGADSFVVYDVPNSTWV-VPAMP 100
                  7889999988765366788888788888*********************4.46665 PP

  == domain 3    score: 17.0 bits;  conditional E-value: 2.1e-06
    PF13964.1   1 praghsavsvggkiyifGGytnsgkylndv 30 
                  +r+gh++++ g+++++fGG t+  ++ n++
  MMETSP1325-20131115|10013_1 106 HRYGHTCTVMGDSLFVFGGWTG-KQAVNTL 134
                  699******************9.5666665 PP

>> PF13854.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0072        14      17      34 ..       2      22 ..       1      29 [. 0.72
   2 !   12.7   0.1   4.4e-05     0.085       1      40 [.      42      90 ..      42      92 .. 0.79
   3 !   14.4   0.0   1.3e-05     0.026       5      29 ..     107     129 ..     102     136 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0072
    PF13854.1 17 iylyGGksg...nddsvsddv 34
                 i+++GG+s      +++++d+
  MMETSP1325-20131115|10013_1  2 ILMFGGMSVnegEIPEYFNDF 22
                 99******5444777778876 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 4.4e-05
    PF13854.1  1 lPppRarhcavvvs.gniylyGGks..g......nddsvsddvyvLslp 40
                 +P++R++h+   ++ + + l+GG++  g      n + + d + v+++p
  MMETSP1325-20131115|10013_1 42 FPSSRYGHSLTQLGpDLMVLFGGWGlgGlqckqeNANRGADSFVVYDVP 90
                 6**********99779*********551455557777777888888887 PP

  == domain 3    score: 14.4 bits;  conditional E-value: 1.3e-05
    PF13854.1   5 RarhcavvvsgniylyGGksgndds 29 
                  R++h   v +++++++GG++g  ++
  MMETSP1325-20131115|10013_1 107 RYGHTCTVMGDSLFVFGGWTG--KQ 129
                  888888888***********7..33 PP

>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0034       6.7      14      43 ..       2      35 ..       1      37 [. 0.86
   2 ?    0.7   0.5      0.18   3.6e+02      28      41 ..      82      95 ..      45      99 .. 0.73
   3 !   19.9   0.0   1.7e-07   0.00034       1      29 [.     106     133 ..     106     134 .. 0.93

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0034
                 EEEE---BS....TTS-TTEEEEEETTTTEEEEE CS
   PF01344.20 14 iYviGGrdg....dtnalnsVerYDpvtntWekl 43
                 i  +GG +       ++ n+   +D++t  W+k+
  MMETSP1325-20131115|10013_1  2 ILMFGGMSVnegeIPEYFNDFRALDTETMVWSKV 35
                 666788888888888999**************97 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.18
                 TEEEEEETTTTEEE CS
   PF01344.20 28 nsVerYDpvtntWe 41
                 +s  +YD  + tW 
  MMETSP1325-20131115|10013_1 82 DSFVVYDVPNSTWV 95
                 55668888888885 PP

  == domain 3    score: 19.9 bits;  conditional E-value: 1.7e-07
                  SSSCEEEEEETTEEEEE---BSTTS-TTE CS
   PF01344.20   1 arssagvvvldgkiYviGGrdgdtnalns 29 
                  +r++++++v+++ ++v+GG++g  +a+n+
  MMETSP1325-20131115|10013_1 106 HRYGHTCTVMGDSLFVFGGWTG-KQAVNT 133
                  59********************.998887 PP

>> PF03089.9  Recombination activating protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   9.5e-05      0.18      72     111 ..      30      66 ..       4      89 .. 0.80
   2 ?   -0.2   0.0      0.15   2.9e+02      86     100 ..     105     116 ..      99     133 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 9.5e-05
    PF03089.9  72 tlsctekelvGdvPearyGhtinvvysrGktacvlfGGrs 111
                  ++  + +  + + P++ryGh++    + G  ++vlfGG  
  MMETSP1325-20131115|10013_1  30 MVWSKVRAEADEFPSSRYGHSLT---QLGPDLMVLFGGWG 66 
                  5555556667899********86...6799*******965 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.15
    PF03089.9  86 earyGhtinvvysrG 100
                  + ryGht  v+   G
  MMETSP1325-20131115|10013_1 105 DHRYGHTCTVM---G 116
                  579***99986...3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 671.92
//
Query:       MMETSP1325-20131115|10015_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-05   23.0   0.3    0.00012   21.9   0.0    1.6  2  PF12697.2  Alpha/beta hydrolase family
     0.0032   16.9   0.0     0.0042   16.5   0.0    1.2  1  PF00561.15 alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.029   14.0   0.2       0.12   11.9   0.0    2.0  2  PF12695.2  Alpha/beta hydrolase family
      0.067   12.9   0.0        0.1   12.3   0.0    1.2  1  PF08386.5  TAP-like protein


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   3.5e-08   0.00012     146     223 ..      28     102 ..       3     106 .. 0.78
   2 ?   -2.2   0.0      0.79   2.7e+03      66      85 ..     144     163 ..     130     169 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 3.5e-08
                  HHHHH--GGGG....GG------HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTTEEEEE---SSSS-...-HH CS
    PF12697.2 146 alvradaaalaellraalldadlrealarldvPvlviageaDrvvppeearrlaealpgarvvvlpgagHllfleapd 223
                  a++  + +++ e +r   ++++l++ ++++++P l++++e+D +v ++  + +++++p+++ + +++a H l +e++d
  MMETSP1325-20131115|10015_1  28 AMLGVSFRWIRESIR---AQRRLAKVASKVSTPLLLMTAEEDSFVKQSGHDMMRKRAPDCTHIFVKDAFHELLFEKAD 102
                  333445555555565...688888**********************************************99999887 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.79
                  --EEEE--------HHHHHH CS
    PF12697.2  66 rpvvlvGHSlGgavalaaaa 85 
                  + +  vG  lG +va  ++a
  MMETSP1325-20131115|10015_1 144 TTFAAVGVGLGSVVAVSLVA 163
                  56788999999999998876 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.2e-06    0.0042     157     228 ..      37     108 ..       7     110 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.2e-06
                  HCHHHHHHHHHCCHHHT-TSSEEEEECCTTSCCHHCHHHHHHHCSTTEEEEEETTHHCSHHHHSCHHHHHHH CS
   PF00561.15 157 aalgrdlvwdvtetlktilvptlvisgtdDplvpykaseklaelipksqlvvidgpgHlafldkpdeinkli 228
                   +++  ++  + ++ +++  p+l++ +++D++v+ +++  + +  p   ++ ++++ H ++++k+d  n ++
  MMETSP1325-20131115|10015_1  37 IRESIRAQRRLAKVASKVSTPLLLMTAEEDSFVKQSGHDMMRKRAPDCTHIFVKDAFHELLFEKADKSNPIL 108
                  667778888899999***************************************************999875 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.6e-05      0.12      96     141 ..      50      94 ..      12      95 .. 0.76
   2 ?   -0.3   0.1      0.22   7.4e+02      58      77 ..     144     163 ..     116     218 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.6e-05
    PF12695.2  96 dlakltlpvllihGtrDgvvppeeaeklakalpgdaelvviegasH 141
                    +k++ p+ll+ +++D +v+++ ++ ++k++p d + + +++a H
  MMETSP1325-20131115|10015_1  50 VASKVSTPLLLMTAEEDSFVKQSGHDMMRKRAP-DCTHIFVKDAFH 94 
                  3457788*************9888777776666.567788888877 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.22
    PF12695.2  58 eriilvGhSlGGgvalelag 77 
                     + vG  lG+ va+ l++
  MMETSP1325-20131115|10015_1 144 TTFAAVGVGLGSVVAVSLVA 163
                  56778889999999988776 PP

>> PF08386.5  TAP-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.1e-05       0.1      23      78 ..      44     100 ..      35     124 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.1e-05
    PF08386.5  23 qrprdelkakgappvLlvqnelDPatpyegakklaralggavlvtvegeGHgala.a 78 
                  qr   ++ +k+ +p+Ll+++e D  +  +g+  ++++ ++ +++ v+++ H+ l  +
  MMETSP1325-20131115|10015_1  44 QRRLAKVASKVSTPLLLMTAEEDSFVKQSGHDMMRKRAPDCTHIFVKDAFHELLFeK 100
                  455555566778***************************************998743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.59
# Mc/sec: 982.91
//
Query:       MMETSP1325-20131115|10016_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|10014_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|10020_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 586.25
//
Query:       MMETSP1325-20131115|10022_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00022   20.8   0.0    0.00024   20.7   0.0    1.1  1  PF07304.6  Steroid receptor RNA activator (SRA1)
  ------ inclusion threshold ------
      0.048   13.1   0.0      0.052   12.9   0.0    1.2  1  PF01126.15 Heme oxygenase
      0.053   13.5   0.0      0.062   13.3   0.0    1.4  1  PF10303.4  Protein of unknown function (DUF2408)


Domain annotation for each model (and alignments):
>> PF07304.6  Steroid receptor RNA activator (SRA1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   5.2e-08   0.00024      41     140 ..      28     131 ..       3     133 .] 0.82

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 5.2e-08
    PF07304.6  41 eesledvlfaLeqvleksrdsv....rkrvvkdisrRLklledmWkgGkLslpvkkRmakLvkeLdagrwdaadeihlslmvDhvtevsqWmvgvkRLiaeaRk 140
                   ++l+ ++ +L+q++ + ++      +k+ + +i++ + +l  + ++G+++  v +   +L++++ a+   aa +ih+ ++         W+ g+k L+ +a+k
  MMETSP1325-20131115|10022_1  28 AAELQPIVPTLNQIVASLTNLAmsppEKKQMGQITQAVSVLLAKLNAGQVAGEVGQQALQLAQAVAARDFAAALQIHKTMVAKEWDSHKDWLKGIKNLVVLAKK 131
                  455666667778887777664322237888999***********************************************9999**************998876 PP

>> PF01126.15  Heme oxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.1e-05     0.052     126     168 ..      68     110 ..      22     124 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.1e-05
                  HHHHHT-HHHHHHHHHHHCT-BCCB-GGGGGS-TT-SSHHHHH CS
   PF01126.15 126 ylgdLSGGqllkkiaaralelpeeceatafyefesisdrkvfk 168
                   l++L +Gq+  ++ ++al+l + + a+ f+   +i+++ v k
  MMETSP1325-20131115|10022_1  68 LLAKLNAGQVAGEVGQQALQLAQAVAARDFAAALQIHKTMVAK 110
                  589********************************99665544 PP

>> PF10303.4  Protein of unknown function (DUF2408)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.4e-05     0.062       4      51 ..      26      73 ..      23     124 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.4e-05
    PF10303.4  4 eispdLepihekLisirrsllslatsakkekskeelaeelkklkeeLk 51
                  i ++L+pi+ +L +i  sl +la s+ ++k+  ++++ ++ l ++L+
  MMETSP1325-20131115|10022_1 26 GIAAELQPIVPTLNQIVASLTNLAMSPPEKKQMGQITQAVSVLLAKLN 73
                 5899**************************999999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       590  (0.0431539); expected 273.4 (0.02)
Passed bias filter:                      379  (0.0277209); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 678.12
//
Query:       MMETSP1325-20131115|10021_1  [L=366]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.9e-22   77.3   2.2    3.5e-20   72.0   1.5    2.1  1  PF10409.4 C2 domain of PTEN tumour-suppressor protein


Domain annotation for each model (and alignments):
>> PF10409.4  C2 domain of PTEN tumour-suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   1.5   2.6e-24   3.5e-20       1     133 [.       1     163 [.       1     164 [. 0.83

  Alignments for each domain:
  == domain 1    score: 72.0 bits;  conditional E-value: 2.6e-24
                  -----EEEEEEEEES----..TT--.---EEEEEE----EEE.............................E----GGGS---..........-TT---EEEEEEEEE---EEEEEEEEEEE--S--EEEEEEE------TT--EEEEEGGG-BS---G...GGS-TT-EEEEEEE CS
    PF10409.4   1 ynpkrlelksvileriPnf..ktrg.gckpkvevyngkkklf.............................keekstkknked..........rakefivkedkpvpveGDvrveffhkgskklskekifrvwFNTsFiekeenvltlpkneLDkalkdk.dkkfsnnfkvevvfe 133
                  y+pk+l +++v+l+++P+f   + g gc+p++ v +  ++                                          +          +  +  +  d+ + v+G v + + + + +   +ek++ +wFNT+F++  +n l l k  +D a+kdk ++ fsn+fkvev+fe
  MMETSP1325-20131115|10021_1   1 YKPKTLAIRHVRLVTVPQFdpAIFGgGCDPYLCVNMMVEDAEkrstaeaegkgphvgctcyktvkvynqksV----------QskvqkchpheKYADLDIGYDEALCVRGNVQLTLKDFD-EVGGDEKMCSFWFNTAFVD--YNYLVLDKFCIDSACKDKaHRLFSNDFKVEVYFE 163
                  89***************996645557********99999998788888888777777777777777653321..........03333345655667888999**************7766.59*****************..*********************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.37s 00:00:01.05 Elapsed: 00:00:00.52
# Mc/sec: 1686.67
//
Query:       MMETSP1325-20131115|10019_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.8   0.3         15    5.0   0.0    2.5  2  PF12611.3 Protein of unknown function (DUF3766)
        2.6    7.9  10.0        3.5    7.5   6.9    1.2  1  PF04695.8 Peroxisomal membrane anchor protein (Pex14p) conserved region


Domain annotation for each model (and alignments):
>> PF12611.3  Protein of unknown function (DUF3766)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1    0.0041        28      16      21 ..       9      14 ..       9      14 .. 0.96
   2 ?    5.0   0.0    0.0023        15      15      21 ..      29      35 ..      23      36 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0041
    PF12611.3 16 FTNIDS 21
                 FTN+D+
  MMETSP1325-20131115|10019_1  9 FTNVDG 14
                 *****8 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0023
    PF12611.3 15 vFTNIDS 21
                 +FTN D+
  MMETSP1325-20131115|10019_1 29 IFTNLDG 35
                 9***998 PP

>> PF04695.8  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.9   0.00051       3.5      50     100 ..      86     134 ..      74     135 .] 0.70

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00051
    PF04695.8  50 seatsstaateaaqstsesstpsdnysnqsssssststpqsqqsyyqqppp 100
                  s  +++t+ +++a+s++ ss p  +y+  +s+s +  ++q+qq++ qq+++
  MMETSP1325-20131115|10019_1  86 S--SATTTLMAHASSNPASSDPHPTYGYVNSPSRAGAQQQQQQQQQQQQQQ 134
                  2..577888999999999999999999999999666555555554444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       635  (0.0464453); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 634.33
//
Query:       MMETSP1325-20131115|10023_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-64  215.1   0.0      1e-63  214.9   0.0    1.0  1  PF00268.16 Ribonucleotide reductase, small chain


Domain annotation for each model (and alignments):
>> PF00268.16  Ribonucleotide reductase, small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.9   0.0   7.3e-68     1e-63     114     280 ..       2     167 ..       1     168 [. 0.98

  Alignments for each domain:
  == domain 1    score: 214.9 bits;  conditional E-value: 7.3e-68
                  .-HHHHHHHHHCCCC-TTCHHHHHHHHHHCCSSSC.HHHHHHHHHHHHHTTTT--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHTSHHHHHHHHHHHHHHHHHHHHHHHTTS-GGG....HHHHHHHHHHHHHHHHHH-----SS-TTTS-TTC CS
   PF00268.16 114 kdekerealvaaieedpaikkkvqwllakvadaes.laeklvafilvEgifFsssFasiaylkkrgllpglcqsnelIsRDEalHtsaacllynnllkkekpeekrieellreaveieiefieakapvkvlllnveaikqyvefvAdrllvelglkklfkvenadvpl 280
                  kd++++++l++aie+ p++ +k++w+l++ +++ + +ae+ + f++vEgifFs+sF+++++lkkrgl+pglc+snelIsRDE+lH+++acl+y++l   +k++e+ i e++++av+ie+ef+++++pv+++++n ++++qy+ef+Adrllv+lg+ k +++ n+++++
  MMETSP1325-20131115|10023_1   2 KDQTQKTHLLQAIETVPCVTRKANWALQWCDSEYAsFAERCIGFAAVEGIFFSGSFCAVFWLKKRGLMPGLCFSNELISRDEGLHCDFACLMYSKLE--NKLPEETILEIITTAVDIEKEFVKDALPVELIGMNSNSMCQYIEFCADRLLVQLGVPKRYNAVNPFDWM 167
                  79999**************************99888*************************************************************..8*****************************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 1278.06
//
Query:       MMETSP1325-20131115|10024_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 418.09
//
Query:       MMETSP1325-20131115|10026_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-11   42.5   0.2      0.021   14.5   0.0    3.1  3  PF00023.25 Ankyrin repeat
    4.9e-10   39.4   0.1    7.8e-10   38.8   0.1    1.3  1  PF12796.2  Ankyrin repeats (3 copies)
    6.3e-10   39.1   0.0    7.7e-06   26.1   0.0    2.0  2  PF13637.1  Ankyrin repeats (many copies)
    3.4e-09   36.5   0.2    0.00015   21.7   0.0    2.2  2  PF13857.1  Ankyrin repeats (many copies)
      6e-07   28.9   0.2      0.073   13.2   0.0    3.2  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   7.6e-06     0.021      17      32 ..       5      20 ..       2      21 .. 0.90
   2 !   13.1   0.0   2.1e-05     0.057       5      22 ..      26      43 ..      22      53 .. 0.87
   3 !   11.9   0.0   4.8e-05      0.13       2      13 ..      66      77 ..      65      80 .] 0.86

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 7.6e-06
                 HHHHHHHTTSSTTHBH CS
   PF00023.25 17 vvklLlsqGAdlnaqd 32
                 +++ Ll++GAd++a+d
  MMETSP1325-20131115|10026_1  5 ICQVLLDAGADVTARD 20
                 89*************9 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 2.1e-05
                 HHHHHHHTTHHHHHHHHH CS
   PF00023.25  5 PLHlAalrgnlevvklLl 22
                 PLH+A+++g++  +k Ll
  MMETSP1325-20131115|10026_1 26 PLHYASESGSVALLKKLL 43
                 ***********9999998 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 4.8e-05
                 SCBHHHHHHHTT CS
   PF00023.25  2 GfTPLHlAalrg 13
                 G TPLH+A+ ++
  MMETSP1325-20131115|10026_1 66 GLTPLHVASAND 77
                 99*******986 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.1   2.9e-13   7.8e-10      10      72 ..       3      79 ..       1      80 [] 0.82

  Alignments for each domain:
  == domain 1    score: 38.8 bits;  conditional E-value: 2.9e-13
    PF12796.2 10 lelvklLlekgadvdlget....pLhlAaeagnleivklLle..........agadvnakdkegntpLhlAvrnghl 72
                   +++ Ll++gadv+ +++    pLh+A+e+g+++ +k Ll            +  +n+ d +g tpLh+A  n + 
  MMETSP1325-20131115|10026_1  3 EMICQVLLDAGADVTARDSceqlPLHYASESGSVALLKKLLLvaekiqgsdhFKEGPNCADTKGLTPLHVASANDRD 79
                 56899**********74446668*****************99999997777733444667789********999875 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   2.8e-09   7.7e-06      13      54 .]       2      43 ..       1      43 [. 0.94
   2 !   12.2   0.0   6.8e-05      0.19      26      44 ..      53      76 ..      41      78 .. 0.70

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 2.8e-09
    PF13637.1 13 rlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                 ++ +++ Ll+ g+d+ ++d++   +Lh+A + g + +lk Ll
  MMETSP1325-20131115|10026_1  2 NEMICQVLLDAGADVTARDSCEQLPLHYASESGSVALLKKLL 43
                 66789**********************************997 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 6.8e-05
    PF13637.1 26 d.....inrtdesGntaLhiAalr 44
                 d     +n+ d +G t+Lh+A  +
  MMETSP1325-20131115|10026_1 53 DhfkegPNCADTKGLTPLHVASAN 76
                 3555589999**********9765 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   5.5e-08   0.00015       1      36 [.       9      43 ..       9      54 .. 0.92
   2 !   13.3   0.0   2.4e-05     0.065       6      27 ..      56      77 ..      52      80 .] 0.83

  Alignments for each domain:
  == domain 1    score: 21.7 bits;  conditional E-value: 5.5e-08
    PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLl 36
                 Ll++g adv a+d + + pLh+A + g++ ++++Ll
  MMETSP1325-20131115|10026_1  9 LLDAG-ADVTARDSCEQLPLHYASESGSVALLKKLL 43
                 89***.*****************************9 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 2.4e-05
    PF13857.1  6 padvnatdeggntpLhlAakgg 27
                  + +n+ d++g tpLh+A  + 
  MMETSP1325-20131115|10026_1 56 KEGPNCADTKGLTPLHVASAND 77
                 5569**************9865 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.012        32      17      29 ..       5      17 ..       2      18 .. 0.84
   2 !   13.2   0.0   2.7e-05     0.073       3      22 ..      24      43 ..      22      46 .. 0.92
   3 !    7.6   0.0    0.0017       4.7       2      14 ..      66      78 ..      65      80 .] 0.83

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.012
    PF13606.1 17 lveaLlengadin 29
                 +++ Ll++gad+ 
  MMETSP1325-20131115|10026_1  5 ICQVLLDAGADVT 17
                 5799*******95 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 2.7e-05
    PF13606.1  3 nTpLhlAasngrielveaLl 22
                 + pLh+A ++g+++l++ Ll
  MMETSP1325-20131115|10026_1 24 QLPLHYASESGSVALLKKLL 43
                 67***************998 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0017
    PF13606.1  2 GnTpLhlAasngr 14
                 G TpLh+A  n r
  MMETSP1325-20131115|10026_1 66 GLTPLHVASANDR 78
                 89******88876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|10025_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.9    6.7   9.3        2.1    6.6   6.4    1.0  1  PF03344.10 Daxx Family
        2.8    7.3   8.9        3.8    6.9   6.2    1.4  1  PF04281.8  Mitochondrial import receptor subunit Tom22
        3.4    6.6   6.0        3.7    6.5   4.2    1.0  1  PF01056.13 Myc amino-terminal region
        3.9    7.1   7.8        4.8    6.8   5.4    1.1  1  PF05887.6  Procyclic acidic repetitive protein (PARP)


Domain annotation for each model (and alignments):
>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.4   0.00061       2.1     428     480 ..      20      73 ..      15      91 .. 0.60

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00061
   PF03344.10 428 stesP.llasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadn 480
                   t+sP    + +s++ +k  ke+d + d++++ d++ + e+e+++e +  + d+
  MMETSP1325-20131115|10025_1  20 GTDSPtDSDGGDSDGGRKQTKESDSDSDSDSDYDTDSDAEGEDDDEADFLQRDE 73 
                  678886667778888888888888777777666644444444444433332222 PP

>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   6.2    0.0011       3.8      26      49 ..      37      63 ..      18      84 .. 0.50

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0011
    PF04281.8 26 esddeeedeedtdsdisddsdve...e 49
                 ++++e+++++d+dsd+++dsd e   +
  MMETSP1325-20131115|10025_1 37 KQTKESDSDSDSDSDYDTDSDAEgedD 63
                 233333333444444444444333221 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.2    0.0011       3.7     212     251 ..      36      73 ..      18      87 .. 0.59

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0011
   PF01056.13 212 lrtspnsssssgedseseeeeeeeeeeeeeeeiDvvtvek 251
                  ++++ +s s  ++ds+s+ + +++ e e+++e D    ++
  MMETSP1325-20131115|10025_1  36 RKQTKESDS--DSDSDSDYDTDSDAEGEDDDEADFLQRDE 73 
                  334444444..44444455566666777777777766555 PP

>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.4    0.0014       4.8      37      94 ..      10      66 ..       3      80 .. 0.60

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0014
    PF05887.6 37 vkGGkGkgekgtkvgaddtngtdrddepeeeeetepeeegeeetepeeegeeetepee 94
                   GG G g+ gt   + d++g d d + ++ +e++ + +++ + + + ++e e + e 
  MMETSP1325-20131115|10025_1 10 GGGGGGGGDDGTDSPT-DSDGGDSDGGRKQTKESDSDSDSDSDYDTDSDAEGEDDDEA 66
                 3455555666666544.67888999988888888877776666555555555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.42s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 409.56
//
Query:       MMETSP1325-20131115|10027_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 744.40
//
Query:       MMETSP1325-20131115|10028_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 542.85
//
Query:       MMETSP1325-20131115|10029_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.6e-50  169.2   0.1      1e-49  169.1   0.1    1.0  1  PF04921.9 XAP5, circadian clock regulator


Domain annotation for each model (and alignments):
>> PF04921.9  XAP5, circadian clock regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.1   0.1   7.7e-54     1e-49      78     204 ..       2     128 ..       1     129 [] 0.98

  Alignments for each domain:
  == domain 1    score: 169.1 bits;  conditional E-value: 7.7e-54
    PF04921.9  78 eekreelrkeflkkqeavkeeeieitfsyyDGsghrkkvrvkkgdtieqfLdkcrkvlakefrelrrvsvddLmlvkedlIiPhhyefYdfiinkargksgpLFsfdakedvrkvedlevekedsta 204
                  +++re+l+ke+++ qe++k+e++e+t+sy+DGsghr++++++kg++i++fL+ +r ++a++f+elr++  d+L+++kedlIiPh+y+fYd+i++kargksgpLF+fd+++dvr ++d + ek++s+ 
  MMETSP1325-20131115|10029_1   2 AAMREKLKKEWVEAQEKMKNEKLEVTYSYWDGSGHRRSIQITKGTSIGKFLEAVRLNIAADFHELRTATSDSLLYIKEDLIIPHQYTFYDLIASKARGKSGPLFHFDVHDDVRLTNDSRIEKDESHP 128
                  578**************************************************************************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       576  (0.0421299); expected 273.4 (0.02)
Passed bias filter:                      508  (0.0371562); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.43s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 594.48
//
Query:       MMETSP1325-20131115|10031_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.054   13.0   0.1       0.06   12.9   0.0    1.1  1  PF01047.17 MarR family


Domain annotation for each model (and alignments):
>> PF01047.17  MarR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.4e-06      0.06       8      48 ..       2      45 ..       1      46 [] 0.92

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.4e-06
                 HHHHHHHSSCEEHH...HHHHHCSS-HHHHHHHHHHHHHTTSEE CS
   PF01047.17  8 iLrilyesgplsvs...eLakklgvsrstvtrvldrLEkkGlie 48
                 +L++ ++ ++++v+   +++++l+  rst +rv+ rL + +l++
  MMETSP1325-20131115|10031_1  2 MLTCTWTFEQARVKmiaKMSEALKAGRSTDSRVVARLKRSELCR 45
                 79999999*****99999999****************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 204.13
//
Query:       MMETSP1325-20131115|10034_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 496.09
//
Query:       MMETSP1325-20131115|10033_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-27   94.9   0.0    3.4e-27   94.3   0.0    1.2  1  PF13905.1  Thioredoxin-like
    7.1e-08   31.9   0.0    1.2e-07   31.2   0.0    1.3  1  PF00085.15 Thioredoxin
    9.9e-08   31.5   0.0    1.4e-07   31.1   0.0    1.2  1  PF00578.16 AhpC/TSA family
    4.1e-07   30.0   0.0    6.6e-07   29.4   0.0    1.3  1  PF13098.1  Thioredoxin-like domain
    6.3e-07   28.9   0.0      8e-07   28.6   0.0    1.2  1  PF08534.5  Redoxin
    7.4e-05   22.3   0.0      9e-05   22.0   0.0    1.1  1  PF02630.9  SCO1/SenC
     0.0036   17.1   0.0      0.035   13.9   0.0    2.2  1  PF13899.1  Thioredoxin-like
  ------ inclusion threshold ------
      0.027   14.3   0.1        0.2   11.5   0.1    2.3  2  PF00462.19 Glutaredoxin
        0.1   11.9   0.0        0.2   11.0   0.0    1.5  1  PF13728.1  F plasmid transfer operon protein


Domain annotation for each model (and alignments):
>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.0   2.2e-30   3.4e-27       1      95 [.       6     115 ..       6     116 .. 0.98

  Alignments for each domain:
  == domain 1    score: 94.3 bits;  conditional E-value: 2.2e-30
    PF13905.1   1 gkivllyfaaswcppckaftpelkelyeklkaskdkveivyVsldrdeeefkkylkknkkpwlavpfndkrrnklkklykvka...............iPtlvvldkdge 95 
                  gk v+lyf+a+wcppck+ftp lk++ye++++++ k+eiv+Vs+d + +  k+y++++++ wl v+++++ r++lk++++  a               iP+lvv+++dg+
  MMETSP1325-20131115|10033_1   6 GKAVALYFSAHWCPPCKRFTPILKDFYEEVNEDEAKLEIVFVSSDDSAQLAKEYMGEMHGSWLMVRYDSPLREELKQKFGCFAgkeapkfpnserrngIPSLVVVGPDGS 115
                  699*****************************************************************************9889************************96 PP

>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   7.9e-11   1.2e-07      18      68 ..       6      59 ..       2      68 .. 0.92

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 7.9e-11
                 HSCEEEEEE-TT---HHHHHHHHHHHHHHTT-...TSEEEEEETTTTHHHHHHT CS
   PF00085.15 18 dklvlvefyApwCGhCkalaPeyeklaeelke...kvvlakvdvdenkdlasey 68
                  k v + f A+wC +Ck++ P+++++ ee++e   k+ ++ v  d++++la+ey
  MMETSP1325-20131115|10033_1  6 GKAVALYFSAHWCPPCKRFTPILKDFYEEVNEdeaKLEIVFVSSDDSAQLAKEY 59
                 578999*************************999999999999***99999998 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0   8.9e-11   1.4e-07      22     119 ..       3     114 ..       1     115 [. 0.75

  Alignments for each domain:
  == domain 1    score: 31.1 bits;  conditional E-value: 8.9e-11
   PF00578.16  22 dlkgkpvvLffypkdfcpvCttelpalaelyeefkkk..gvevigvsvdspeshkkfaekne....lnfpllsDeegevakaygvlnee.........kglalratfvidkeg 119
                   l+gk v L+f ++ +cp+C++  p l++ yee  +   ++e++ vs+d+  +++k    +     l +++ s   +e+ +++g +  +             +++++v+ ++g
  MMETSP1325-20131115|10033_1   3 ALSGKAVALYFSAH-WCPPCKRFTPILKDFYEEVNEDeaKLEIVFVSSDDSAQLAKEYMGEMhgswLMVRYDSPLREELKQKFGCFAGKeapkfpnseRRNGIPSLVVVGPDG 114
                  468***********.*******************966226699*****99996665433333455544444455788888888888666777787777777778888877776 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   4.4e-10   6.6e-07       4      96 ..       5     117 ..       2     125 .. 0.67

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 4.4e-10
    PF13098.1   4 ngkrvivvftdpdCpyCkklhkelkklndvtkyl...kdkfeviyvnidkskerseavld.................kdgekevkleek..........elgrklgvrgtPtivfldgeGklv 96 
                   gk v+++f++ +Cp Ck++ + lk+     +++   + k e+++v+ d+s++ +++ +                  +       l++k          ++ +  + +g P++v++ ++G ++
  MMETSP1325-20131115|10033_1   5 SGKAVALYFSAHWCPPCKRFTPILKDF---YEEVnedEAKLEIVFVSSDDSAQLAKEYMGemhgswlmvrydsplreE-------LKQKfgcfagkeapKFPNSERRNGIPSLVVVGPDGSEL 117
                  59******************9999964...4444333668*********99998887555333333333333322210.......222233333333345666666**********9999865 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   5.2e-10     8e-07      25     102 ..       3      85 ..       1     126 [. 0.74

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 5.2e-10
                  HHTTSEEEEE---------IIIIIHHHHTHHHH.HH----EEEEE-SS-HH...HHHHHHHTT.TSEE.E--..----HHHHHT CS
    PF08534.5  25 dfkgkkvvlvfvpgafcptCsaehpyleklaklakekgvdvvavvaqndaf...vkeawakeglkipv.lsD..esasfakalg 102
                  ++ gk v l+f +  +cp+C++ +p l++++++ +e + +  +v +++d+    +ke +++ +  +++  +D     ++ +++g
  MMETSP1325-20131115|10033_1   3 ALSGKAVALYFSAH-WCPPCKRFTPILKDFYEEVNEDEAKLEIVFVSSDDSaqlAKEYMGEMHGSWLMvRYDspLREELKQKFG 85 
                  4789**********.**********99999999888776655555554444459*******88888885677654677777777 PP

>> PF02630.9  SCO1/SenC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   5.9e-08     9e-05      48     142 ..       2      92 ..       1     114 [. 0.88

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 5.9e-08
                  GGG----EEEEEE-SSSSSS-SSTHHHHHHHHHHHHHTTTT-EEEEEESSTTTS-HHHHHHHHTTST--GGGEEEEB---HHHHHHHHHHHHS-- CS
    PF02630.9  48 enLkGklsliyFgftncpdicpealekltdllkkLkeekidvqvvfisvDPerDtpevlkeylknfdesfigltgtveeikevakkfkvfyskvi 142
                  e L Gk + +yF    cp  c + +  l+d+ ++ +e++ ++++vf+s D   D++++ key+ +++ s +         +e+ +kf  f  k  
  MMETSP1325-20131115|10033_1   2 EALSGKAVALYFSAHWCP-PCKRFTPILKDFYEEVNEDEAKLEIVFVSSD---DSAQLAKEYMGEMHGSWLMVRYDSPLREELKQKFGCFAGKEA 92 
                  6799*************7.6****************************98...99*************999988888888888888877766655 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   2.3e-05     0.035      16      61 ..       5      50 ..       2     112 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 2.3e-05
    PF13899.1 16 egkpllvifgadwcpdCqaldrdvlsd.eevkaalaekfvllrvdvt 61
                 +gk++ ++f a wcp+C+++   + +  eev +  + k ++++v  +
  MMETSP1325-20131115|10033_1  5 SGKAVALYFSAHWCPPCKRFTPILKDFyEEVNE-DEAKLEIVFVSSD 50
                 799***************997665333333444.3344444444444 PP

>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00013       0.2       2      34 ..      11      50 ..      10      70 .. 0.65
   2 ?   -0.2   0.0       0.6   9.1e+02      34      46 ..      73      85 ..      66      97 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00013
                 EEEE-STSHHHHHHHHHH.......HHTTHHEEEEETTTC CS
   PF00462.19  2 vvftkptCpyCkkakrlL.......delgvkyeeidvded 34
                 ++f+ ++Cp+Ck+   +L       +e   k e++ v+ d
  MMETSP1325-20131115|10033_1 11 LYFSAHWCPPCKRFTPILkdfyeevNEDEAKLEIVFVSSD 50
                 58999*************4444333222233555555555 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.6
                 CHHHHHHHHHHHS CS
   PF00462.19 34 dpeireelkelsg 46
                 d+ +reelk++ g
  MMETSP1325-20131115|10033_1 73 DSPLREELKQKFG 85
                 67899****9983 PP

>> PF13728.1  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00013       0.2     118     161 ..       4      52 ..       1      64 [. 0.80

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00013
    PF13728.1 118 lakeyGlfffyrsdcpycealapilqaf.....aekygievlpVsvDGk 161
                  l+ +   ++f  + cp c+++ pil++f     +++ ++e+++Vs D+ 
  MMETSP1325-20131115|10033_1   4 LSGKAVALYFSAHWCPPCKRFTPILKDFyeevnEDEAKLEIVFVSSDDS 52 
                  556666789*******************444433456899999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1025.64
//
Query:       MMETSP1325-20131115|10037_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 463.64
//
Query:       MMETSP1325-20131115|10038_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.075   12.8   0.1      0.094   12.5   0.0    1.2  1  PF04023.9 FeoA domain


Domain annotation for each model (and alignments):
>> PF04023.9  FeoA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.8e-06     0.094       1      29 [.       6      53 ..       6      56 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 6.8e-06
                 -BHCCHTTTSEEEEGGGSTT...................HCSHHHHHH CS
    PF04023.9  1 vpLsdlkeGesgeiarirde...................dpellrrLs 29
                 vpL  + ++ ++ei ri+++                     +llrrL 
  MMETSP1325-20131115|10038_1  6 VPLRHCRPNSRVEIGRIEHQavqegdggvsgprvdksreTIDLLRRLL 53
                 79****************966778888888888877777666677775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 311.02
//
Query:       MMETSP1325-20131115|10039_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        4.7    6.9   8.0          5    6.8   5.5    1.0  1  PF05760.7 Immediate early response protein (IER)


Domain annotation for each model (and alignments):
>> PF05760.7  Immediate early response protein (IER)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.5   0.00037         5     206     244 ..       7      45 ..       1      51 [. 0.54

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00037
    PF05760.7 206 kaageesdseeaaapgfvplKrarledeepessgeeeda 244
                  + + e s s++ +  +  p K+ar e+ ++++ +++e++
  MMETSP1325-20131115|10039_1   7 EDSDEDSSSDDESEDDTPPAKKARTEEASSSEEESSEEE 45 
                  33444444444444777889******9665544333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       797  (0.0582943); expected 273.4 (0.02)
Passed bias filter:                      525  (0.0383996); expected 273.4 (0.02)
Passed Vit filter:                       149  (0.0108982); expected 13.7 (0.001)
Passed Fwd filter:                        52  (0.00380339); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.43s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 254.31
//
Query:       MMETSP1325-20131115|10035_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-25   87.4   1.5    8.2e-25   87.2   1.1    1.1  1  PF02883.15 Adaptin C-terminal domain


Domain annotation for each model (and alignments):
>> PF02883.15  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   1.1     6e-29   8.2e-25       3     115 .]      52     165 ..      50     165 .. 0.96

  Alignments for each domain:
  == domain 1    score: 87.2 bits;  conditional E-value: 6e-29
                  EEEEE-SSEEEEEEEE...EESSSEEEEEEEEEE-SSS-EEEEEEEEE--TTSEE-----S-S-B--..----EE---EES..--------EEEEEEEEEEETTEE..EEEEEEEE- CS
   PF02883.15   3 vilyeddglqIgfkfek..perpnqiritlfftNkssqpitnfsfqaavpkslklqlqppssttlpp..gtqiqqvllvenrefsepakkklrlrvrisytvggsqvlelkdvnefp 115
                  + ++e++gl+++++++k  p + ++  i+  ftN s+ +itn++fqaavpk ++l+++pps tt+p+  g+ ++q+++v n   s+ + kkl++r+ris+t  g++ +e+ +v +fp
  MMETSP1325-20131115|10035_1  52 INAFEKNGLKLTMELSKpdPTDVQKSDIKCKFTNSSMGDITNLNFQAAVPKFITLSMKPPSATTVPAngGGAVEQIVTVKN---SQINVKKLMVRMRISFTASGQNLVEQAQVADFP 165
                  679****************9*************************************************************...556667**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 856.57
//
Query:       MMETSP1325-20131115|10040_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 408.27
//
Query:       MMETSP1325-20131115|10042_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 406.34
//
Query:       MMETSP1325-20131115|10043_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 569.80
//
Query:       MMETSP1325-20131115|10045_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       691  (0.0505413); expected 273.4 (0.02)
Passed bias filter:                      611  (0.0446899); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 735.25
//
Query:       MMETSP1325-20131115|10044_1  [L=334]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-06   26.8   0.0     0.0005   20.1   0.0    2.3  2  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.2   0.0    0.0032        43      78     100 ..      10      31 ..       2      34 .. 0.83
   2 !   20.1   0.0   3.6e-08    0.0005       4     100 ..     129     232 ..     127     234 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0032
                  TTCEEEEEESSHHHHHHHHHHHH CS
   PF00169.24  78 dvesyllsaeseeerkrWvqalk 100
                  d ++++l + ++ee++ W++ l 
  MMETSP1325-20131115|10044_1  10 D-RTFKLRCADAEEAQGWLDTLL 31 
                  4.49***************9885 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 3.6e-08
                  EEEEEEEE.......TSSSCEEEEEEEEET.TEEEEESSSSTTCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTT.CEEEEEESSHHHHHHHHHHHH CS
   PF00169.24   4 eGyllkks.......ellktwkkryfvLts.nyLlyfksskkksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdv.esyllsaeseeerkrWvqalk 100
                  +G+llkk          + +w+ ryf       L yfk++    +k+pkg+++l+ + +v     +k++   +++  f +   d+ + + ++a +++e++ Wv++l 
  MMETSP1325-20131115|10044_1 129 SGTLLKKAtgkhtfkAVRDQWQSRYFEVYPdATLRYFKKEG---DKTPKGTVDLRMVlDVAAHVGSKDHGDVKDPTRFDVDLGDSgKILRMKAATQDEAEHWVESLI 232
                  7999999999999999999*******8877699*******9...8******************999865478888888888888888****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.51
# Mc/sec: 1569.38
//
Query:       MMETSP1325-20131115|10047_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   17.0   1.2     0.0013   16.8   0.9    1.0  1  PF07243.6  Phlebovirus glycoprotein G1
  ------ inclusion threshold ------
       0.28   10.6   2.8       0.34   10.4   1.9    1.1  1  PF06687.7  SUR7/PalI family
       0.54    9.7   4.3        0.3   10.6   1.7    1.6  1  PF00420.19 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L


Domain annotation for each model (and alignments):
>> PF07243.6  Phlebovirus glycoprotein G1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.9   2.9e-07    0.0013     420     491 ..      22      95 ..      19     118 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2.9e-07
    PF07243.6 420 lsallvvtlvvlivlllllvlkrvlkllkllpkkllsPlsWl..kvfirWllrklkirvesaiarineeiGWrd 491
                  l a + v+ + l +l++l +  ++ + l+++p    + l+W+  +vf+ W+ r++ ++  s+i+r   e G  +
  MMETSP1325-20131115|10047_1  22 LGAAVCVVALALKALVCLGLALNLAHDLRVVPSLAFVALAWMfgVVFVAWVARAVTASGLSVITRAMAETGNAQ 95 
                  6788999999999****************************96679******************9998888654 PP

>> PF06687.7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.9   7.4e-05      0.34     121     213 ..      23     117 ..       7     125 .. 0.67

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 7.4e-05
    PF06687.7 121 llivhiialvlsvlllllslllavcsspe....plsflnlllsllsflstllaalldtllfvivrgqvnsnlikaslgpnlyalgWlalaaallvvi 213
                  + +v+++al+l +l  l  l+l++ +  +    + ++  +++ +++f++ ++ a+++ +l+vi+r+  ++ +      p+ ++l+ +a++++l+v++
  MMETSP1325-20131115|10047_1  23 GAAVCVVALALKALVCLG-LALNLAHDLRvvpsLAFVALAWMFGVVFVAWVARAVTASGLSVITRAMAETGN-AQREHPRALMLARVAVVPMLAVLT 117
                  678888888888877777.55555555557774333333333456677777888888888885555555444.555557888888888888888765 PP

>> PF00420.19  NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.7   6.5e-05       0.3      23      86 ..      32      95 ..      22     103 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 6.5e-05
   PF00420.19 23 llkvLlglelmslavnllivllgvftvdplpqalvltalviaaaeaalgLallvrvyreygtdd 86
                  lk+L++l+l ++ ++ l v+ ++  v    +  v+++  +a a++a gL+++ r++ e+g+ +
  MMETSP1325-20131115|10047_1 32 ALKALVCLGLALNLAHDLRVVPSLAFVALAWMFGVVFVAWVARAVTASGLSVITRAMAETGNAQ 95
                 6899999999999999999999999999999999999999***************999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       693  (0.0506875); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 634.04
//
Query:       MMETSP1325-20131115|10048_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.7   4.6       0.17   11.5   3.2    1.2  1  PF12555.3 Thiamine pyrophosphokinase C terminal


Domain annotation for each model (and alignments):
>> PF12555.3  Thiamine pyrophosphokinase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.2   1.3e-05      0.17       6      34 ..       8      35 ..       6      45 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.3e-05
    PF12555.3  6 LYrsrisgkallllvlAaLvAlavallis 34
                 L r+++s++a+  ++lA  +A+ava++++
  MMETSP1325-20131115|10048_1  8 L-RHPVSSGAIRGAALALALAVAVAVAVA 35
                 5.899999999666666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 230.59
//
Query:       MMETSP1325-20131115|10050_1  [L=381]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.68u 0.37s 00:00:01.05 Elapsed: 00:00:00.49
# Mc/sec: 1863.29
//
Query:       MMETSP1325-20131115|10049_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2724  (0.199239); expected 273.4 (0.02)
Passed bias filter:                      545  (0.0398625); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.95u 0.41s 00:00:01.36 Elapsed: 00:00:00.68
# Mc/sec: 902.16
//
Query:       MMETSP1325-20131115|10052_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|10051_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.32s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 924.99
//
Query:       MMETSP1325-20131115|10054_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   13.3   0.0      0.056   13.3   0.0    1.1  1  PF09374.5 Predicted Peptidoglycan domain
       0.12   10.6   0.0       0.14   10.4   0.0    1.0  1  PF03023.9 MviN-like protein


Domain annotation for each model (and alignments):
>> PF09374.5  Predicted Peptidoglycan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   8.2e-06     0.056       4      31 ..       3      28 ..       1      45 [. 0.87

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8.2e-06
                 HHHHHH--....---------HHHHHHH CS
    PF09374.5  4 kilQrllglyedvsaDGiiGpkTlqAla 31
                  +lQ++++   + + DG +Gp+ ++A++
  MMETSP1325-20131115|10054_1  3 EMLQEVMK--WKAKSDGSFGPEAMEAIQ 28
                 79*****8..889*************84 PP

>> PF03023.9  MviN-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   2.1e-05      0.14     310     339 ..      16      45 ..      15      48 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 2.1e-05
    PF03023.9 310 rGaFseedvtataevLaayalgLipyalvk 339
                   G+F++e+++a++++++++a++ + + l++
  MMETSP1325-20131115|10054_1  16 DGSFGPEAMEAIQRIFSMFAVSTPTWGLRE 45 
                  59********************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 226.07
//
Query:       MMETSP1325-20131115|10057_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.62
# Mc/sec: 363.32
//
Query:       MMETSP1325-20131115|10058_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.62
# Mc/sec: 181.66
//
Query:       MMETSP1325-20131115|10059_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          2    8.0  14.2       0.31   10.5   4.5    2.2  2  PF12549.3 Tyrosine hydroxylase N terminal


Domain annotation for each model (and alignments):
>> PF12549.3  Tyrosine hydroxylase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.6    0.0086   1.2e+02       3      10 ..      24      31 ..      18      32 .. 0.82
   2 ?   10.5   4.5   2.3e-05      0.31       2      23 ..      36      57 ..      35      57 .. 0.95

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.0086
    PF12549.3  3 PSitsPqa 10
                 P ++s+++
  MMETSP1325-20131115|10059_1 24 PAAASSPW 31
                 77889988 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 2.3e-05
    PF12549.3  2 tPSitsPqakGfRravsEldpK 23
                 t+S+ts +a G+Rr+ ++ +++
  MMETSP1325-20131115|10059_1 36 TDSTTSTAAWGTRRPSASTTST 57
                 9****************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|10053_1  [L=1871]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   9.2e-161  535.3   0.0   1.2e-160  534.9   0.0    1.2  1  PF01039.17 Carboxyl transferase domain
   5.3e-105  351.9   0.1   1.1e-100  337.7   0.0    3.3  3  PF08326.7  Acetyl-CoA carboxylase, central region
    5.1e-49  166.3   0.0    1.2e-48  165.1   0.0    1.6  1  PF02786.12 Carbamoyl-phosphate synthase L chain, ATP binding domain
    1.8e-23   82.4   0.0    5.1e-23   80.9   0.0    1.9  1  PF02785.14 Biotin carboxylase C-terminal domain
    3.8e-15   55.9   0.0    9.3e-15   54.7   0.0    1.6  1  PF13535.1  ATP-grasp domain
    5.5e-11   41.8   0.1    1.5e-10   40.4   0.0    1.8  1  PF00364.17 Biotin-requiring enzyme
    3.3e-06   26.4   0.0    9.6e-06   24.9   0.0    1.7  1  PF02222.17 ATP-grasp domain
    2.3e-05   24.2   0.0    4.6e-05   23.2   0.0    1.5  1  PF02655.9  ATP-grasp domain
    0.00035   19.8   0.0    0.00094   18.4   0.0    1.6  1  PF07478.8  D-ala D-ala ligase C-terminus
  ------ inclusion threshold ------
      0.074   12.6   0.0       0.17   11.4   0.0    1.6  1  PF12747.2  DdrB-like protein


Domain annotation for each model (and alignments):
>> PF01039.17  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  534.9   0.0    9e-164  1.2e-160       1     493 []    1232    1785 ..    1232    1785 .. 0.96

  Alignments for each domain:
  == domain 1    score: 534.9 bits;  conditional E-value: 9e-164
                   CCCH---EECCCCHHCCSTTT----CHHHHHHHHHHHHHC-.-TCEEEEE---------GCCCCTECCEESSTSSTCHHCC...CCHHHHHHHHH............--EEEEEEEE---.--.TT---TTT-----HHHHHHHHHHHS-EEEEECSEE----THHHHHSSEEEEETT.--B-----HHHHHH--.---STCCG---HCCCCT----SEEESSCCHHHHHHHHHHCTS-SSTTSTTS-----S-SS-SSS.CGHHHCS-BT.TB---HHHHHHHHS-...........---EEEET----TTEEEEEEE----EE-EEEE-TT....................CC--.---HHHHHHHHHHHHHHHH.TT--EEEEEEE-------CCCHTTTTT---HHHHHHHH--S-EEEEEEE..EE----CGGGTGCCGTT.CE..EETTT-EE--------HHHHTHHHHHCCCHHH............HCHHHH.........HHHHHHHHHHHHTTCHHHHHHHHHCCCSSHHHHHHHHHHCCCCGGGGHH.HHHHHHHHHH CS
   PF01039.17    1 kehprGkltareridllldpgsFgeledlafhrvtelglkr.lprdgvvtgsGaviGravevvaqdftvlggslgpakgek...llkaqelalke............glpligindsgGa.egriqegvenlrgsGkifganskasgeipqislvtgrcaGggaYlpalgdriimveetspifltGpdvvkkvlg.eevtseelgGadqhmaksGvahltaeddeealelirkllsylpkkasnnqedapivetldepdreeelasivPddskkpyDvreviarivD...........eseFlEikegyAktvvtGfArlgGipvGvvAnetk....................veaG.vlfidsalKaarfirlcda.enlPlviladvrGflvGqrqeyggilkhGaklvyalaeatvPkitvilr..klyGGayvvmdskilgadav..aawptariaVlgpegaveilfrkekaaaemer............keleal.........kkkklaeyeeellnpyvaaargfaDavidpsetraklvialellwkksr.kfyarkrrni 493 
                   +e+p+G++++++++d+++++gsFg  ed +f++++ ++++r lpr++++++sGa+iG  + +++++++ + ++++pa+g++   l++ +++ l e            g++++++ d++G+ +g    gvenlrgsG+i+g++s+a++e++++s+vtgr++G+gaYl++lg+r+i+++  +p++ltG+++++k+lg +++ts++++G++q+m  +Gv+h +++dd+e+++ i++++s++pk+a++   ++ + +++d+ dr+    +++P+  k+pyD+r ++a++             ++ F+E+++g++k+vv+G+ArlgGip+Gv+A+et+                    ++aG v+++dsa+K+a++i+++ + enlPl+i+a++rGf++G+r+++g+ilk+Ga++v+al+e+++P++++i++  +l+GGa+vv+d++i+++ ++  +a +++r+++l+p g+ e++fr ++++ +m+             +    +         +kk++ ++e+ l++ y ++a +faD+++++++++ak+vi+  l+wk sr + y+r +r+i
  MMETSP1325-20131115|10053_1 1232   1785
                   69*******************************************************************************98888888888888*************************888...****************************************************.************************************************************88888..788899999*****5...7*****..9**********999888*********99*************************************************************************************************************************************************9.77799999***************************98888877654440....1566677777*******************************************************99987 PP

>> PF08326.7  Acetyl-CoA carboxylase, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   5.9e-05     0.081       1      25 [.     552     576 ..     552     598 .. 0.70
   2 !  337.7   0.0  7.8e-104  1.1e-100     115     692 ..     588    1115 ..     572    1131 .. 0.91
   3 ?   -3.6   0.0       1.4   1.9e+03      73     111 ..    1767    1806 ..    1766    1815 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 5.9e-05
                  --S-XXXXXXXXXXXXXXXXXXXXX CS
    PF08326.7   1 eLdDpSkVkkaepFegeLpelgspt 25 
                  +L+DpSkVkk+e+F+g ++ +++ +
  MMETSP1325-20131115|10053_1 552 TLKDPSKVKKIETFDGAFDMVKEGS 576
                  69****************8776654 PP

  == domain 2    score: 337.7 bits;  conditional E-value: 7.8e-104
                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXX......XXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.X.XXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF08326.7  115 rkliekylalesrellerlvaPLvslverYegGlke..heaevvkslleeYlsVEelFsgngreedvilkLreenkddlskVvkivlshsrvkkknkLvlalLdqlqepekk.......lpkslrdaLkrlssLesrayakvaLkAreiLiqsklpsleeRkaqleaiLrslesvteskygeseakrreakleslkelvdsktav..fDvLaslFdhsdesvslaalevYvrraYrayevkelqveeedkellivsWeFqlsesessrlnaekseskrvasvsdlsavvekakeertGvmvalksledleealaeaLerlpdatkkesagsesksepinvlnvaiseaeefsedeeliskleeilkenkeeLkaagvrrvtfivardegeypkyftFrasdeyeEdpiiRhlePalafqLELgRLs.nfdikplptrnrnihvYeavgkek..qeqadkrfFlRaiirqsdlrdkissaeyliselerllldaldeLevaasns.vkrtdlnhiFlnfvpelnl....dlesleealasflervgerlwrLrVtqvEvrirlrdpstgekvplRviitnvsGyvvkvelYkEvkdkk 692 
                   +++i+ y +        +++aPL +lv+   +G+++  ++a+ v+ ll+++  VE+ F+  + ++dv ++L + +kd l++V+ ++++h++ +++++ +l lL+q+  + ++       ++++l +aL++ls Le+++y+++ ++A ++L+++++ ++e+Rka+l++ L ++e +                      l++ +t +  +D+L+slF++sd+ ++++a+e+++rr+Yra+ + +++v +e+ + + + ++         +          +  v +  +v       r+Gvmv++k+ +++ + +++++e +++     s ++++ ++pinv+++a   a+ +++d++ i+++e ++ ++k++L+++g+r v +i+++ e   p+yf+ ++++ey+Edp++R+++P++ ++LEL+RL  n+dik++++  rn++vY++v+k +  + +a++++FlRa+ ++sdl        +  s++ r+ll+aldeL++a+ ++ v +t +++iFln+++e++     +le +  +l+++ +r+ +rl+rL+V+++Ev+ir++  s+g+  plR+i++++sG ++k ++Y E  d+ 
  MMETSP1325-20131115|10053_1  588   1115
                   455554444.......457**************987225899*****************.9*********************************************.55455699********************************************************4443.....................566666666669*****************************************.777777777........2..........3334444444.......9************************7755...4555566***********999999***********************************55.7**********************************999***********************999*******************........899*****************************************9999999999****************************9.9***************************99987 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 1.4
                   XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXX CS
    PF08326.7   73 ylewqeqlsalasRlpqk.lekeleelvekyesrsasfPa 111 
                   +lew+++++++  R++++ +e+el++++ ++ +  ++ +a
  MMETSP1325-20131115|10053_1 1767 VLEWKSSRATMYWRVKRRiAEDELRNKIMEADATLDHAAA 1806
                   589************97626889*****999988776444 PP

>> PF02786.12  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.1   0.0   8.6e-52   1.2e-48      22     210 ..      19     203 ..       5     204 .. 0.96

  Alignments for each domain:
  == domain 1    score: 165.1 bits;  conditional E-value: 8.6e-52
                  B..SSHHHHHHHHHH----EEEEETT-------EEESSHCCHHHHHHHHHHHCCHHHSTS-EEEEE--SS-EEEEEEEEE-TTS-EEEEEEEEECCEETTEEEEEEES--S--HHHHHHHHHHHHHHHHH-------EEEEEE-TT---EEEEEEESS--TTHHHHHHH----HHHHHHHHH----CCC CS
   PF02786.12  22 apvetleealaiakeigyPviikaafglGGkGmrvardeeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvevlrDakgnvitvcerenslqlrtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGldlvkeaakialgekLee 210
                  a+v+t+eea+++ak+ig+Pv++ka+ g+GGkG r+  +eeel++ + + ++e +     + +++ +  ++ +++Ev+++ D++gn+i ++ r++s q+r qk+ e+ P    +++++ ++++aa ++++++g++gagtve+l++++++e++++E+N+Rl+ve++++e    ++l ++++++a+g++L+ 
  MMETSP1325-20131115|10053_1  19 AMVHTVEEAVDAAKRIGFPVMLKASEGGGGKGIRMNANEEELRANFPQVVNEVP----GSPMFMMQLCTEARHLEVQIVGDEHGNAIAINGRDCSTQRRFQKIFEEGPPTIAKPDTFLEMQRAAQRLTQQIGYIGAGTVEYLYKAETDEFFFLELNPRLQVEHPVTEGLSLVNLPATQLQVAMGIPLNR 203
                  458**************************************************7....5677888999**********************************************************************************************************************985 PP

>> PF02785.14  Biotin carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.9   0.0   3.7e-26   5.1e-23       2     107 .]     240     346 ..     239     346 .. 0.99

  Alignments for each domain:
  == domain 1    score: 80.9 bits;  conditional E-value: 3.7e-26
                  EEEESEETTTTTEE--SB--SEE-------EEEE------B--SSS--EEEEEEEE-SSHHHHHHHHHHHHHT-EE--.---SHHHHHHHHH-HHHH-----TTTTT CS
   PF02785.14   2 aRiyaEdpakdflPstGkvtelelpegpgvrvdsaveegsevspyyDsmiaKlivhgpdreeAlkrlrraLaelrieG.vktniaflrailadeeflagevdtafle 107
                  aRi+aE+p+++f P++G++++++++++ +v+    v ++  ++++ Ds++++l+++gp+re+A k l  aL+el+++G ++t++++l ++l+++ef+++++dt++l+
  MMETSP1325-20131115|10053_1 240 ARITAENPDEGFKPTSGTIERVNFQSTSNVWGYFSVGANGGIHEFADSQFGHLFAKGPNREQARKALVLALKELEVRGdIRTTVDYLVQLLETQEFKDNTIDTSWLD 346
                  8********************************************************************************************************96 PP

>> PF13535.1  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0   6.8e-18   9.3e-15      21     179 ..      17     173 ..       6     174 .. 0.91

  Alignments for each domain:
  == domain 1    score: 54.7 bits;  conditional E-value: 6.8e-18
    PF13535.1  21 rfalvdseedleaaaeeigfpvvlKPadgagslgvrrvddaaeleaalealaaeveldegeflvEeyie.Gdeysvdglvl.dgelvflgisryletsppdfsdgaelgsvspseepleealrelaerllkalglkngvfHlEfkltpd.GrlvliEinaRp 179
                  + a v++ e++ +aa++igfpv lK ++g g +g+r   +++el+a + ++ +ev+  + +++++++++  +   v+ + + +g+++++++++  +++   f +  e g++++  ++ + +++++a+rl +++g+  g+  +E+ + ++ ++++++E+n+R+
  MMETSP1325-20131115|10053_1  17 DKAMVHTVEEAVDAAKRIGFPVMLKASEGGGGKGIRMNANEEELRANFPQVVNEVP--GSPMFMMQLCTeARHLEVQIVGDeHGNAIAINGRDCSTQRR--FQKIFEEGPPTIAKPDTFLEMQRAAQRLTQQIGY-IGAGTVEYLYKAEtDEFFFLELNPRL 173
                  47889***************************************************..8888888888835999999999999***9999999999855..445578888888888889****************.*************************7 PP

>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   1.1e-13   1.5e-10      12      73 ..     491     550 ..     484     551 .. 0.91

  Alignments for each domain:
  == domain 1    score: 40.4 bits;  conditional E-value: 1.1e-13
                  EEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEESS-TT-EE----ECEE CS
   PF00364.17  12 vkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllak 73 
                  v+ g+vv++l ++G +V+ag + +eveamKm m ++a ++G +k  l   G+ +++gdlla 
  MMETSP1325-20131115|10053_1 491 VT-GKVVRYLQEDGAQVEAGTPFVEVEAMKMIMPLKASESGAIKHELSA-GSIISTGDLLAS 550
                  44.78999************************************97777.*********996 PP

>> PF02222.17  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0     7e-09   9.6e-06      12     160 ..      19     172 ..      11     174 .. 0.83

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 7e-09
                  EEEEHH.HH----------EEEEES-------------------------....---EEEEEE----SEEEEE---B-----B----E..EEEEE----EEEEEEEEE....--HHHHHHHHHHHHHTT-----EEEEEE-----.EEEEEEESS CS
   PF02222.17  12 laveskeeleeaveelglpvvvKarrlgydGkGqsvvkseeeleqaleal....keeklivEefvpfekElsvlvvRsveGevafypv..vetvqkdgilrlsvapaevsekqqkkaeeiakkiveeLggvGvlavElFvledgeellvnElapR 160
                  ++v++ ee+ +a++++g+pv++K +  g  GkG  +  +eeel++ + ++     + ++ + + +   + l v +v +++G+ ++++     t ++ + + +   p  ++ +   ++++ a+++++++g++G  +vE  ++++ +e ++ El pR
  MMETSP1325-20131115|10053_1  19 AMVHTVEEAVDAAKRIGFPVMLK-ASEGGGGKGIRMNANEEELRANFPQVvnevPGSPMFMMQLCTEARHLEVQIVGDEHGNAIAINGrdCSTQRRFQKIFEEGPPTIAKPDTFLEMQRAAQRLTQQIGYIGAGTVEYLYKAETDEFFFLELNPR 172
                  5688899999*************.566678*********99986544444344499999999***99**************9888765114555555667777778888889999**********************999999999********9 PP

>> PF02655.9  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   3.4e-08   4.6e-05      27     159 ..      31     174 ..      13     176 .. 0.85

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 3.4e-08
    PF02655.9  27 leeeekklvvKprdGaGgesvrvvenkeeaeealeele.........vvqefieGeplSvsvlsdgekvlllavnrqlieleekk..fvyaGnltpietelkeelvelaeevvealegllGyvGvDlvlkd..eepyviEvNPRlt 159
                  ++++  ++ +K  +G+Gg+++r+  n+ee  + ++++          ++q   e ++l v++++d+ +   +a+n     ++++   ++  G  t ++ +   e++++a+++++++ g  G   v+ ++k   +e  ++E NPRl+
  MMETSP1325-20131115|10053_1  31 AKRIGFPVMLKASEGGGGKGIRMNANEEELRANFPQVVnevpgspmfMMQLCTEARHLEVQIVGDE-HGNAIAINGRDCSTQRRFqkIFEEGPPTIAKPDTFLEMQRAAQRLTQQI-GYIGAGTVEYLYKAetDEFFFLELNPRLQ 174
                  566677899*********************9999988889************************55.7778899988876644334488889999899888999999999999999.9999999999988877899********97 PP

>> PF07478.8  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   6.9e-07   0.00094      25     172 ..      27     170 ..      10     172 .. 0.72

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 6.9e-07
                  ..HHHHH----EEEEE---------EEESSGGGHHHHHHHHHTT...-SSEEEEE-----EEEE--EE---EE------EE---SSS-HHHHH..C-TT-EE-SS----HHHHHHHHHHHHHHHHHTT-----EEEEE-.-.----EEEEEE CS
    PF07478.8  25 lekvveklgypvfvKpareGSSvGiskveseeeleeaieeafqy...dekvlveeaiegreievavlgneklevsevgeivlkkgfydyeekyelidssaeievpakleeeveekikelakkaykalglkGlaRvDffl.teegeivlnEvN 172
                       +++g+pv++K+++ G   Gi    +eeel++ + + ++    +   +++   e+r +ev ++g+e+ ++ +++    +++  ++++ +       e   p+  +++   +++ +a+++ + +g  G + v  ++  e++e+++ E+N
  MMETSP1325-20131115|10053_1  27 AVDAAKRIGFPVMLKASEGGGGKGIRMNANEEELRANFPQVVNEvpgSPMFMMQLCTEARHLEVQIVGDEHGNAIAINGRDCSTQ-RRFQKIF-------EEGPPTIAKPDTFLEMQRAAQRLTQQIGYIGAGTVEYLYkAETDEFFFLELN 170
                  34567899***************************9998887752325566777777***********99977766655444432.2333333.......2234556666777788888888888888888888888885677888888888 PP

>> PF12747.2  DdrB-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00013      0.17      22      71 ..     202     248 ..     185     252 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00013
                  GGHHHHHHH------B----------B-GGGGGGB-GGG---E.EEE--- CS
    PF12747.2  22 vlLrdvkrlleRlgtssteekepnykfpleeekdFDWdligarvkssdge 71 
                  +++ d++r ++R   +++e   +   f+ ee+kd D ++i ar+  ++++
  MMETSP1325-20131115|10053_1 202 NRIPDIRRFYGR---ADAEDGDGPIDFMTEEYKDIDTHVIAARITAENPD 248
                  57789*******...9999999*********************9988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1871 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 2.58u 0.38s 00:00:02.96 Elapsed: 00:00:01.20
# Mc/sec: 3736.32
//
Query:       MMETSP1325-20131115|10060_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|10062_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 630.88
//
Query:       MMETSP1325-20131115|10061_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-29  101.3   0.0    2.2e-18   65.5   0.0    2.0  2  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.1e-12   1.5e-08      38      91 ..       7      60 ..       3      64 .. 0.92
   2 !   65.5   0.0   1.6e-22   2.2e-18       2      92 ..      72     164 ..      71     168 .. 0.94

  Alignments for each domain:
  == domain 1    score: 34.0 bits;  conditional E-value: 1.1e-12
                 --GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHH CS
   PF00153.22 38 asasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkl 91
                 + ++++y++++dal ++ ++eG+ +ly Gl pn+lr +  ++  +++y++ k +
  MMETSP1325-20131115|10061_1  7 PAERRNYTSVIDALLQVKRNEGLAALYTGLAPNILRGMAMNVGGLSCYDQAKLF 60
                 667899********************************************9876 PP

  == domain 2    score: 65.5 bits;  conditional E-value: 1.6e-22
                  HHHHHHHHH----HHHCCHHHCHHHHHHHHHHH..-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF00153.22   2 klsvlksllaGaiAgaiaalvttPldvvKtrlq..ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvtyetlkkll 92 
                  k+s++ +l a+++Ag++a+++  P d++K rlq  k  + ++ +y+gi d+ +k++++eG+ +++ G++p + r +p++ i ++t e+++  +
  MMETSP1325-20131115|10061_1  72 KVSLATQLSAASFAGFAASFLSLPCDLIKSRLQdmKPLPDGTMPYRGIADCASKVLRNEGVFAFWTGMGPYWARLAPQSTIILLTIEAIRPAY 164
                  6788899**************************998889999*********************************************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 858.69
//
Query:       MMETSP1325-20131115|10064_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 343.63
//
Query:       MMETSP1325-20131115|10065_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-27   96.3   0.0    2.2e-27   96.1   0.0    1.0  1  PF05517.7  p25-alpha
  ------ inclusion threshold ------
      0.066   13.4   0.0        0.1   12.8   0.0    1.3  1  PF02257.10 RFX DNA-binding domain


Domain annotation for each model (and alignments):
>> PF05517.7  p25-alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.1   0.0   3.2e-31   2.2e-27       1     127 [.      15     138 ..      15     139 .] 0.95

  Alignments for each domain:
  == domain 1    score: 96.1 bits;  conditional E-value: 3.2e-31
    PF05517.7   1 leaaFkkFasfg.kaekkemdsktfakllkdckvldkkvtatdvdiiFsk.vkaksarrityeqFkkalkelaekkkkkkseaeelkeklvaeksPavsgatkadavrfltDkskYTGvhkerfdesgk 127
                  le++++k+a+fg  +++  ++s+ f+k++kdck++dk++t+t  d+iF + + ak a++i ++ F  al+e a++kk+    ++++   + a++sP+ sg t+++++rf++Dks +TGv + +++++++
  MMETSP1325-20131115|10065_1  15 LEEVYRKYAAFGrASKGDGLTSAAFVKIMKDCKLVDKRLTTTSLDLIFTRcLPAKGAKKILLDGFYAALTEAAKTKKV---PLDQFLAVV-ASASPSNSG-TTQAESRFYDDKSNWTGVATRGGPTNID 138
                  7899********7777888*******************************8999************************...999999988.*********.99999*******************9987 PP

>> PF02257.10  RFX DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.5e-05       0.1      22      56 ..      11      45 ..       4      55 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.5e-05
   PF02257.10 22 vsiprnevyeayrsfCdelklkplsaAsfGKlirs 56
                 +s+  +evy++y++f +  k + l++A f K+++ 
  MMETSP1325-20131115|10065_1 11 ISVYLEEVYRKYAAFGRASKGDGLTSAAFVKIMKD 45
                 5677789**************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.73
# Mc/sec: 456.29
//
Query:       MMETSP1325-20131115|10067_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 456.66
//
Query:       MMETSP1325-20131115|10069_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       981  (0.0717525); expected 273.4 (0.02)
Passed bias filter:                      527  (0.0385459); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.42s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 723.26
//
Query:       MMETSP1325-20131115|10070_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 350.90
//
Query:       MMETSP1325-20131115|10068_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-07   31.3   2.3    5.7e-07   29.5   1.6    1.8  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   1.6   4.2e-11   5.7e-07       3     103 ..      13     109 ..      11     110 .. 0.83

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 4.2e-11
                  BEEEEEEEETSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGE.EEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHHH CS
   PF00169.24   3 keGyllkksellktwkkryfvLtsnyLlyfksskkksykapkgsiplndc.tvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknll 103
                   +Gyl+kk+ +  +w+kr+f  ++  L y+k++k     ++  + +l ++ ++k  +   +         f +  +d+ +y l+a  +e+++ Wv++lk+l 
  MMETSP1325-20131115|10068_1  13 VHGYLYKKT-RDGRWQKRWFETNGCFLTYYKNKK---MTKLLAALNLPQVgEIKMLPPDHEDDIDHVGSLFSVELNDR-QYMLKAAKKEDAEMWVEKLKQLK 109
                  58*******.***********************9...57777777777777777777764223445555688888888.********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       808  (0.0590989); expected 273.4 (0.02)
Passed bias filter:                      644  (0.0471036); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.41s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 771.63
//
Query:       MMETSP1325-20131115|10071_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-15   55.2   0.0    7.8e-15   54.9   0.0    1.1  1  PF04389.12 Peptidase family M28
    0.00031   20.2   0.0    0.00036   20.0   0.0    1.1  1  PF01546.23 Peptidase family M20/M25/M40
  ------ inclusion threshold ------
      0.022   13.8   0.0      0.029   13.5   0.0    1.1  1  PF05450.10 Nicastrin


Domain annotation for each model (and alignments):
>> PF04389.12  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.0   1.7e-18   7.8e-15       3      92 ..      30     116 ..      28     125 .. 0.87

  Alignments for each domain:
  == domain 1    score: 54.9 bits;  conditional E-value: 1.7e-18
                  EEE-EE--B--....-----TTTT---HHHHHHHHHHHH...TT---SCEEEEEEESSTT------HHHHHCHHHHHTCEEEEE--S-----S CS
   PF04389.12   3 lvlgAHyDsvgkdapifvGatDnAsgvaalleiarvlaa...qgsepkrgvrflffdgEEdgllGSralaenpkaeldkiravlnlDmlgsae 92 
                  ++lg H D       ++ Ga D  sg+a+lle+ar l a   +g++p+r++++l ++gEE gllGS+ + e++  +l++  +++n+D + s++
  MMETSP1325-20131115|10071_1  30 VLLGNHRDA------WVFGAADPNSGTAVLLEVARGLGAllkTGWRPQRTIKLLSWSGEEYGLLGSTGWGELNADALARAIVYINVDTAVSGD 116
                  889999999......89******************999652256777***********************97777999999******998875 PP

>> PF01546.23  Peptidase family M20/M25/M40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0     8e-08   0.00036      17      83 ..      38     114 ..      18     120 .. 0.75

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 8e-08
                  EE----HCCHHHHHHHHHHHHHHHH...HCCC-SCEEEEEEESTTTTT-SS..SSHHHHHH.....EEEEEECCEEH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxx.....xxxxxxxxxxx RF
   PF01546.23  17 lygrGaddmkggllaalaalealae...agtklkgtvellftpdEEggsrg..gakaliea.....alglhidlgiv 83 
                   +  Ga+d  +g +++l+++++l +    g ++++t++ll + +EE g  g  g ++l ++     ++ ++ d++++
  MMETSP1325-20131115|10071_1  38 AWVFGAADPNSGTAVLLEVARGLGAllkTGWRPQRTIKLLSWSGEEYGLLGstGWGELNADalaraIVYINVDTAVS 114
                  56679****************9988888********************66444555555443433355555555555 PP

>> PF05450.10  Nicastrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.3e-06     0.029      20      69 ..      41      90 ..      36     101 .. 0.95

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.3e-06
   PF05450.10 20 lGaessvsslvallaaaealskllkdisnlkrnvlFvffnGEsydYiGSq 69
                 +Ga ++ s+ ++ll +a+ l  llk   + +r +  + + GE y+ +GS 
  MMETSP1325-20131115|10071_1 41 FGAADPNSGTAVLLEVARGLGALLKTGWRPQRTIKLLSWSGEEYGLLGST 90
                 8***********************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|10072_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|10073_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   13.9   0.5      0.025   13.8   0.4    1.1  1  PF06393.6 BH3 interacting domain (BID)


Domain annotation for each model (and alignments):
>> PF06393.6  BH3 interacting domain (BID)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.4   1.8e-06     0.025      25      60 ..       9      45 ..       5      57 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.8e-06
                 XXXXXXXXXXXXXXXXXXXXXXXX.XXXXX..XXXXX CS
    PF06393.6 25 LesssdeefreeLevlgkelpvlk.allgdsddeLqt 60
                 L +++++ef  eLevl++el++ + al+ +++d+  t
  MMETSP1325-20131115|10073_1  9 LSQTKHQEFTDELEVLKNELASSAtALMKKRNDNTTT 45
                 67899**************999887888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       940  (0.0687537); expected 273.4 (0.02)
Passed bias filter:                      674  (0.0492978); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.47s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|10066_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       73  (0.00533938); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.33s 00:00:00.62 Elapsed: 00:00:00.47
# Mc/sec: 163.16
//
Query:       MMETSP1325-20131115|10075_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-51  174.0   0.0    3.1e-51  173.9   0.0    1.0  1  PF00069.20 Protein kinase domain
    3.2e-33  114.8   0.0    3.5e-33  114.6   0.0    1.0  1  PF07714.12 Protein tyrosine kinase
     0.0024   16.8   0.0     0.0029   16.5   0.0    1.2  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.012   15.2   0.1      0.025   14.1   0.0    1.5  2  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.9   0.0   9.2e-55   3.1e-51       1     189 [.      11     203 .]      11     203 .] 0.97

  Alignments for each domain:
  == domain 1    score: 173.9 bits;  conditional E-value: 9.2e-55
                  EEEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHH-TTB--EEEEEEE..STEEEEEEE--SC-EHHHHHH....HHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHH CS
   PF00069.20   1 yelleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavrElkilkklsHpnivkllevfee..kdelylvleyveggdlfdllk....kegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvil 189
                  y +++ lGsG+fG+V k+++++++ ++A+Ki++  + ++++   a++E++il++++ p iv++  +f +   +el+lv+e++e+gdl+  +k     +++++e+ i   + +++egl ylHs++i+HrDLKp+Ni+l  +g+ k+ D+ ++k  +k +  ++t  gt++YmAPEv + +k+y++++D+WslG+++
  MMETSP1325-20131115|10075_1  11 YDMVKALGSGAFGSVSKVRRRSDRVEFAMKIVQIGKMEEREVADALNECRILASVRNPRIVNFECAFLSrgGKELCLVMELCEKGDLAGRIKkcqrMRRRVDERGIWAHLVEMAEGLVYLHSKNICHRDLKPANIFLAADGSAKLGDLNVSKL-NKGDDLMSTKIGTPYYMAPEVWN-GKKYGAACDIWSLGCVM 203
                  567899************************************9************************99999*******************9777777888**************************************************97.***********************.***************96 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   0.0     1e-36   3.5e-33       3     195 ..      13     203 .]      11     203 .] 0.88

  Alignments for each domain:
  == domain 1    score: 114.6 bits;  conditional E-value: 1e-36
                  EEEEE-------EEEEEEETTTTSSEEEEEEEEECT.TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBE..SSSSEEEEEE---B--HHHHHHHT..GTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HH CS
   PF07714.12   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke.saeeeekeefleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlefLrkk..ekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvll 195
                  + k lG+GafG+V + + +    +++v+ a+K+++  ++ee+e ++ l+e +i+ ++++p+iv++  +++   +++l++v+e++++GdL   ++k    +++++ + +    +++a+G+ yL+sk++ HrdL   N++l+ +   k++D  +++  + dd ++   ++     +mapE+++ kk+  + D+Ws G+++
  MMETSP1325-20131115|10075_1  13 MVKALGSGAFGSVSKVRRR----SDRVEFAMKIVQIgKMEEREVADALNECRILASVRNPRIVNFECAFLsrGGKELCLVMELCEKGDLAGRIKKCqrMRRRVDERGIWAHLVEMAEGLVYLHSKNICHRDLKPANIFLAADGSAKLGDLNVSKLNKGDDLMS---TKIGTPYYMAPEVWNGKKYGAACDIWSLGCVM 203
                  5789***********9999....999********76366677799*********************9999766677*****************9983345667777789999******************************************985555443...33445579*********************997 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   8.6e-07    0.0029      99     165 ..      91     158 ..      34     168 .. 0.66

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 8.6e-07
    PF06293.9  99 legaqdLaeilakwae....laeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDl 165
                  l +  dLa  ++k +     ++e+   a+l + ++    +h+ +++H+dl ++ni+l +++    + l Dl
  MMETSP1325-20131115|10075_1  91 LCEKGDLAGRIKKCQRmrrrVDERGIWAHLVEMAEGLVYLHSKNICHRDLKPANIFLAADG---SAKLGDL 158
                  5555666655555444222466666666777777777889*****************9998...4445454 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.44   1.5e+03      16      53 ..      30      66 ..      14     100 .. 0.59
   2 ?   14.1   0.0   7.4e-06     0.025     151     183 ..     110     150 ..      75     156 .. 0.72

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.44
                 EEETT.TEEEEEESSCCHHHHHHHHHHHHHHHCCSSS....B CS
   PF01636.18 16 vttgagryvlrrarparaaeelrrevallrlLakagi....p 53
                 +++++ ++++++   +       +e +++++L ++ i     
  MMETSP1325-20131115|10075_1 30 RRSDRVEFAMKIVQIG-----KMEEREVADALNECRIlasvR 66
                 3333337777777777.....334444444444444433323 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 7.4e-06
                  H.....HHHHHHHHHHC...SS--EEB-SS-SGGGEEEETT CS
   PF01636.18 151 r.....vlaalaallpg...aeppvllHgDlhpgNllvdpd 183
                  r     ++a+l ++  g     ++ ++H+Dl+p+N+++ +d
  MMETSP1325-20131115|10075_1 110 RvdergIWAHLVEMAEGlvyLHSKNICHRDLKPANIFLAAD 150
                  23333566666666666777899*************99844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 992.78
//
Query:       MMETSP1325-20131115|10074_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.4   0.2     0.0042   16.8   0.0    2.0  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.1e-07    0.0042      11      39 .]      40      68 ..      31      68 .. 0.92
   2 ?   -3.2   0.0      0.59   8.1e+03       9      18 ..     129     138 ..     122     141 .. 0.51

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 3.1e-07
                 SSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27 11 tspVtcvafspdgpllasgSrDgtirlWd 39
                 +++V ++   p+  +la++++D+++ +Wd
  MMETSP1325-20131115|10074_1 40 EATVHALLMVPSLGFLATCGSDSKVNVWD 68
                 789999999*******************9 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 0.59
                  SSSSSEEEEE CS
   PF00400.27   9 gHtspVtcva 18 
                    ++  +c++
  MMETSP1325-20131115|10074_1 129 CGEHEPRCLC 138
                  4444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1541.81
//
Query:       MMETSP1325-20131115|10077_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        6.3    6.6  10.3        7.5    6.4   7.1    1.1  1  PF00137.16 ATP synthase subunit C


Domain annotation for each model (and alignments):
>> PF00137.16  ATP synthase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   7.1   0.00055       7.5       2      33 ..       4      34 ..       3      37 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.00055
   PF00137.16  2 aalgaglavglaalgagigigiagaaaieaia 33
                 a++ +g a+  aa+gag+g+g a  +++ ++a
  MMETSP1325-20131115|10077_1  4 AVVVVGAAI-DAAIGAGVGVGTATVTLADVAA 34
                 566778888.99***********999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.60
# Mc/sec: 175.73
//
Query:       MMETSP1325-20131115|10079_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-11   43.6   6.1    4.3e-07   28.9   0.5    1.9  2  PF00805.17 Pentapeptide repeats (8 copies)
    2.8e-05   23.8   1.0    4.3e-05   23.1   0.7    1.3  1  PF13576.1  Pentapeptide repeats (9 copies)
    3.3e-05   23.4   0.2    3.9e-05   23.2   0.1    1.1  1  PF13599.1  Pentapeptide repeats (9 copies)


Domain annotation for each model (and alignments):
>> PF00805.17  Pentapeptide repeats (8 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.5   9.4e-11   4.3e-07      12      39 ..      25      52 ..      24      53 .. 0.93
   2 !   22.8   0.4   7.3e-09   3.3e-05       6      30 ..      39      63 .]      38      63 .] 0.82

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 9.4e-11
   PF00805.17 12 dLrgadLsgAdLtgAnLsgAnLsganls 39
                 d+++ d+sgA+ ++An++gA L+ga++ 
  MMETSP1325-20131115|10079_1 25 DMSKKDFSGAIANEANFNGATLRGARFF 52
                 78999********************995 PP

  == domain 2    score: 22.8 bits;  conditional E-value: 7.3e-09
   PF00805.17  6 AnLrgAdLrgadLsgAdLtgAnLsg 30
                 An+ gA Lrga +  A+L gA ++g
  MMETSP1325-20131115|10079_1 39 ANFNGATLRGARFFKATLQGASFEG 63
                 8888888888888888888888876 PP

>> PF13576.1  Pentapeptide repeats (9 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.7   9.4e-09   4.3e-05       7      45 ..      27      62 ..      25      63 .] 0.81

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 9.4e-09
    PF13576.1  7 sgsadFsnatFngsasFsnatFgnadFsgatFtgdvdFs 45
                 s+  dFs+a  n++ +F++at+++a+F +at   +++F+
  MMETSP1325-20131115|10079_1 27 SKK-DFSGAIANEA-NFNGATLRGARFFKATLQ-GASFE 62
                 566.8888888888.899999999999999997.99997 PP

>> PF13599.1  Pentapeptide repeats (9 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.1   8.6e-09   3.9e-05      15      60 ..      18      62 ..       7      63 .] 0.62

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 8.6e-09
    PF13599.1 15 gvnFsgaelkncnFeecklfkevnFsncdlkdadfseadlknasFs 60
                 + +Fs+ +++  +F+++ +  e+nF++++l+ a+f+ a+l +asF+
  MMETSP1325-20131115|10079_1 18 KQDFSTRDMSKKDFSGAIA-NEANFNGATLRGARFFKATLQGASFE 62
                 4456666666666666666.46666666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 284.85
//
Query:       MMETSP1325-20131115|10081_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 533.93
//
Query:       MMETSP1325-20131115|10080_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-27   93.8   0.1    1.2e-26   93.5   0.1    1.1  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.5   0.1   8.8e-31   1.2e-26     195     309 ..       2     116 ..       1     120 [. 0.92

  Alignments for each domain:
  == domain 1    score: 93.5 bits;  conditional E-value: 8.8e-31
                  HH-----.--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--...-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT CS
   PF00632.20 195 licGsdklidvedlrrnteydggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrks..ededrLPtasTCfnyLkLpdYsskeilkekLltAieeg 309
                  l+ G+++ +d+  lr+ t+y++ +++++pti+++we+++ef+p+er+ ++kF  + +rlPl+    ++ kf+i r    ++++++P a+TCf +++ p+Y++ e + ++ ++Aie++
  MMETSP1325-20131115|10080_1   2 LVTGRNE-VDLRLLREMTVYENPFSESHPTIRLFWEMMEEFTPAERSMMIKFAWSRDRLPLTAAD-FSSKFKITRLFsnNPNQAFPQAHTCFFTIDVPEYTDLEAMTQRCRYAIEHC 116
                  899****.9****************************************************7665.567999998664466778*******************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 862.69
//
Query:       MMETSP1325-20131115|10082_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 244.24
//
Query:       MMETSP1325-20131115|10083_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-05   23.3   0.1    0.00023   20.7   0.1    1.9  2  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   1.7e-08   0.00023      18      39 .]       9      30 ..       8      30 .. 0.97
   2 ?    0.6   0.0     0.039   5.3e+02       3      19 ..      43      58 .]      41      58 .] 0.79

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 1.7e-08
                 EEESSSTEEEEEETTSEEEEEE CS
   PF00400.27 18 afspdgpllasgSrDgtirlWd 39
                 ++ p+g++la+++++g + +Wd
  MMETSP1325-20131115|10083_1  9 SWQPEGNFLATAGSNGVVSIWD 30
                 8********************9 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.039
                 EEEEEESSSSSEEEEEE CS
   PF00400.27  3 ckatlrgHtspVtcvaf 19
                 c +  +g  +p+++v +
  MMETSP1325-20131115|10083_1 43 CNSRSQGG-GPISAVEW 58
                 66677788.99999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|10084_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-11   43.9   1.5    2.1e-11   43.4   0.1    1.9  2  PF01529.15 DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.2      0.04   5.5e+02     153     162 ..      49      58 ..      13      80 .. 0.52
   2 !   43.4   0.1   1.5e-15   2.1e-11      54     112 ..      96     154 ..      63     157 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.04
   PF01529.15 153 llafhlylil 162
                  +l++ ++ i+
  MMETSP1325-20131115|10084_1  49 ILIQIVWAIC 58 
                  2222222222 PP

  == domain 2    score: 43.4 bits;  conditional E-value: 1.5e-15
   PF01529.15  54 CqtikpprshHCriCnkCvlkfDhHCpwvnncIGarNhkyFllfllyltlllviallls 112
                    t +pp+s +  +C+  + +fDh Cpw++  IG+rN + F  f+ +++++l++ +ll 
  MMETSP1325-20131115|10084_1  96 VGTFRPPKSQFDGDCGLIIEEFDHTCPWTGTGIGRRNMPAFTTFVSMICVCLIFDILLM 154
                  56889*****************************************9999999988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       614  (0.0449093); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.63
# Mc/sec: 635.22
//
Query:       MMETSP1325-20131115|10086_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.5   0.1       0.11   12.5   0.0    3.0  3  PF07499.8 RuvA, C-terminal domain
          1    9.4   6.7       0.35   10.8   0.8    2.0  2  PF05395.7 Protein phosphatase inhibitor 1/DARPP-32


Domain annotation for each model (and alignments):
>> PF07499.8  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.6e-05      0.11      10      31 ..      16      39 ..      16      50 .. 0.77
   2 ?   -1.1   0.6       0.3     2e+03      18      27 ..      66      75 ..      64      83 .. 0.62
   3 ?   -1.5   0.2      0.38   2.6e+03      34      34 ..     103     103 ..      92     121 .. 0.54

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.6e-05
    PF07499.8 10 LlaLGYkekeAekAvakvle..dp 31
                 L +LGY++ e++ +++++ +  ++
  MMETSP1325-20131115|10086_1 16 LKGLGYPKEEVDGILNEIRKkaES 39
                 89****************854322 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.3
    PF07499.8 18 keAekAvakv 27
                 keA++A ++ 
  MMETSP1325-20131115|10086_1 66 KEAREAEKAE 75
                 6666665554 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 0.38
    PF07499.8  34 s 34 
                   
  MMETSP1325-20131115|10086_1 103 A 103
                  1 PP

>> PF05395.7  Protein phosphatase inhibitor 1/DARPP-32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.8   5.1e-05      0.35     100     164 ..      35     102 ..      26     107 .. 0.68
   2 ?    1.6   0.3     0.035   2.4e+02     119     134 ..     145     160 ..     129     164 .] 0.53

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 5.1e-05
    PF05395.7 100 kqaeeeedeldeldelg...qpeeeeeeteaeeseeeessleedsqaevglegaaektaeesekeqee 164
                  k+ae+ee+ +   d++g    ++e ++e +++e +e+e++  +d++a+ g eg + k++  +e e+  
  MMETSP1325-20131115|10086_1  35 KKAESEEEVGAVVDTIGdvvEVKEMKKEVQEKEAREAEKAEANDGEARAGPEGYVTKSKALKEAEEVA 102
                  3444455554445554411155666666777777888888899***************9999888765 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.035
    PF05395.7 119 eeeeeeteaeeseeee 134
                  ++ +ee+++ee+eee+
  MMETSP1325-20131115|10086_1 145 TDTAEEEKEEEEEEEG 160
                  3333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1358  (0.0993271); expected 273.4 (0.02)
Passed bias filter:                      708  (0.0517847); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.49
# Mc/sec: 802.05
//
Query:       MMETSP1325-20131115|10088_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 612.40
//
Query:       MMETSP1325-20131115|10089_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 483.88
//
Query:       MMETSP1325-20131115|10087_1  [L=308]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-63  212.1   0.6    5.3e-63  211.7   0.4    1.1  1  PF12781.2 ATP-binding dynein motor region D5


Domain annotation for each model (and alignments):
>> PF12781.2  ATP-binding dynein motor region D5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.7   0.4   3.9e-67   5.3e-63      58     227 ..       2     173 ..       1     174 [. 0.98

  Alignments for each domain:
  == domain 1    score: 211.7 bits;  conditional E-value: 3.9e-67
    PF12781.2  58 rvirigqkgyldvieqaisegdtvlienleesidpvldpllgrntikkgr..yikigdkeveynpkfrlilhtklanphykpelqaqatlinftvtrdgledqllaavvakerpdleklksdltkqqnefkivlkeledsllsrlssasgnflgdtalvenleitkrtaaei 227
                   v+r+gqk  l  + +a+++g t+lienl+es+d vl+p++gr t+k+gr  y+k+gd eve++p+frl lhtkl nphy pe+qa++tlinftvt+ gledqll  vv k+r dl +l  dl +qqn+fki +keleds+l rl++a+g++  d  l+e le tkr + +i
  MMETSP1325-20131115|10087_1   2 EVVRLGQKDMLRNLTRALENGYTILIENLGESLDAVLNPVIGRMTVKRGRtmYVKLGDSEVEFHPNFRLFLHTKLSNPHYPPEIQAETTLINFTVTKLGLEDQLLVLVVRKQRRDLADLSEDLVNQQNGFKIKMKELEDSILYRLATAEGDITEDVGLIEGLEETKRISVDI 173
                  589**********************************************8889******************************************************************************************************************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       514  (0.0375951); expected 273.4 (0.02)
Passed bias filter:                      386  (0.0282329); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.37s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 1419.38
//
Query:       MMETSP1325-20131115|10090_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|10092_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-30  103.4   0.0    7.2e-30  103.2   0.0    1.0  1  PF01965.19 DJ-1/PfpI family
    4.7e-11   42.1   0.0    5.7e-11   41.8   0.0    1.1  1  PF13278.1  Putative amidotransferase


Domain annotation for each model (and alignments):
>> PF01965.19  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.2   0.0   1.1e-33   7.2e-30      17     146 ..       4     129 ..       1     130 [. 0.91

  Alignments for each domain:
  == domain 1    score: 103.2 bits;  conditional E-value: 1.1e-33
                  TSCCCCCECTSEEGGG--GGGESEEEE----HHHHHHCT-.HHHHHHHHHHHH-.---EEEE----.HHHHHHC-TT--EE---GGGHHHHHHTT-EEHHHHCSCEEETT.EEEESSGGGHHHHHHHHHHHH CS
   PF01965.19  17 egkfvvkvtadktledvnaddydalvlPGGhaaaedlradaeklvelvkefaaa.gkpiaaiChgp.alLaaagllkgkrvtgfpnvkedleeagaeyvdedalvvvdgnklvTsanpgsaeefakelleal 146
                  +g   vk+ ad+++ +v+  ++d++ +PGG+++ae+lr d+e l + ++++a++ gk++aa+C++p ++L+++g+l gk++t++p+    + + + +    +++vvvdg +++Ts++pg++ +fa++l+e l
  MMETSP1325-20131115|10092_1   4 RG---VKIMADVNIHTVELASFDLIAVPGGMPGAERLR-DCELLTAMLQKQASQeGKYVAAVCAAPaVVLQSHGILAGKSATCYPASPF-VSVLENHQSGPEDEVVVDG-NVITSRGPGTSLKFALKLVEVL 129
                  45...99*******************************.9**********99999******************************9966.44444455555689*****.5******************987 PP

>> PF13278.1  Putative amidotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   8.3e-15   5.7e-11      45     166 .]       3     127 ..       1     127 [. 0.85

  Alignments for each domain:
  == domain 1    score: 41.8 bits;  conditional E-value: 8.3e-15
    PF13278.1  45 sngvkitadhplad..aaeaDvllvpggpg.lqkeaadpallaqlqkld.aegqllaavcsG.allLaeaglLdgreatthwtlkealreaypkvsldedrlfvadgkliTagGvlaaldlalhlie 166
                  s gvki ad  +++  +a +D++ vpgg+      ++   l+a lqk++ +eg+++aavc + a++L   g+L g +at++      + +  ++ + + ++ +v dg++iT+ G   +l++al l+e
  MMETSP1325-20131115|10092_1   3 SRGVKIMADVNIHTveLASFDLIAVPGGMPgAERLRDCELLTAMLQKQAsQEGKYVAAVCAApAVVLQSHGILAGKSATCYPA--SPFVSVLENHQSGPEDEVVVDGNVITSRGPGTSLKFALKLVE 127
                  5689998888887777999*********9967777777999999988774677********945678888**********985..46777777778899**************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 704.53
//
Query:       MMETSP1325-20131115|10093_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   21.7   2.0       0.43   10.4   0.0    3.2  3  PF13374.1  Tetratricopeptide repeat
     0.0002   20.8   0.6      0.002   17.6   0.1    2.2  2  PF13414.1  TPR repeat
    0.00041   19.9   1.6       0.71    9.8   0.0    3.4  3  PF07719.12 Tetratricopeptide repeat
      0.001   19.5   3.0      0.044   14.3   0.0    2.8  2  PF13432.1  Tetratricopeptide repeat
     0.0029   17.3   3.4     0.0044   16.8   0.1    2.7  4  PF13424.1  Tetratricopeptide repeat
     0.0061   16.9   4.0        2.3    8.9   0.0    3.3  3  PF13428.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.019   14.9   0.1      0.079   12.9   0.1    2.0  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      0.073   13.1   0.1         14    6.1   0.0    2.7  2  PF13431.1  Tetratricopeptide repeat
       0.48   10.8   6.4        1.1    9.7   0.0    3.0  4  PF07721.9  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.2     0.092   1.4e+02      13      33 ..      32      52 ..      26      59 .. 0.80
   2 !    6.9   0.0    0.0036       5.5       7      32 ..      75     100 ..      74     107 .. 0.91
   3 !   10.4   0.0   0.00029      0.43       7      35 ..     113     141 ..     112     144 .. 0.91

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.092
    PF13374.1 13 rargryeeAlaleeealairr 33
                  +  +y +  +++e+al+ r 
  MMETSP1325-20131115|10093_1 32 KNAQKYYRVKNFLEAALEARA 52
                 56677778899*******996 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0036
    PF13374.1   7 nLAlalrargryeeAlaleeealair 32 
                  +LA al+  g++ eA++ +e++++i 
  MMETSP1325-20131115|10093_1  75 TLATALMFDGDLKEAVEEAEKVREIS 100
                  79********************9986 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 0.00029
    PF13374.1   7 nLAlalrargryeeAlaleeealairrrl 35 
                  +LA +l+++g+  eA +  e++l + +++
  MMETSP1325-20131115|10093_1 113 TLAETLSRLGQKKEAMEVGEATLKRIKQH 141
                  79********************9988876 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   1.3e-06     0.002       3      68 ..      27     100 ..      25     102 .. 0.85
   2 ?    1.0   0.0       0.2     3e+02      43      59 ..     114     129 ..     101     137 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.3e-06
    PF13414.1   3 AealkelGnalfkegdydeAieayekAleldpnnae.........lyynlAlaylklgkdyeeAledyekAleld 68 
                  Ae+    ++++++ +++ eA  + + +l   p++           l y lA a++  g d +eA+e++ek+ e++
  MMETSP1325-20131115|10093_1  27 AETRLKNAQKYYRVKNFLEAALEARAGLHAGPEDGAlvppalraqLGYTLATALMFDG-DLKEAVEEAEKVREIS 100
                  5566667999*********************9995556666665588999********.68*********99886 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.2
    PF13414.1  43 lAlaylklgkdyeeAle 59 
                  lA ++ +lg+  +eA+e
  MMETSP1325-20131115|10093_1 114 LAETLSRLGQ-KKEAME 129
                  6888999996.488876 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2      0.12   1.8e+02       8      23 ..      34      49 ..      27      60 .. 0.72
   2 !    9.8   0.0   0.00047      0.71       5      30 ..      74      99 ..      74     102 .. 0.91
   3 ?    5.4   0.0     0.012        18       6      29 ..     113     136 ..     112     141 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.12
                 HHHHHHTT-HHHHHHH CS
   PF07719.12  8 GlayyklgdyeeAlea 23
                 ++ yy+ +++ eA+  
  MMETSP1325-20131115|10093_1 34 AQKYYRVKNFLEAALE 49
                 6778999999777644 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00047
                 HHHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF07719.12  5 ynlGlayyklgdyeeAleafekAlel 30
                 y l+ a++  gd++eA+e  ek+ e+
  MMETSP1325-20131115|10093_1 74 YTLATALMFDGDLKEAVEEAEKVREI 99
                 789*******************9887 PP

  == domain 3    score: 5.4 bits;  conditional E-value: 0.012
                  HHHHHHHHTT-HHHHHHHHHHHHH CS
   PF07719.12   6 nlGlayyklgdyeeAleafekAle 29 
                   l++ + +lg+ +eA e  e  l+
  MMETSP1325-20131115|10093_1 113 TLAETLSRLGQKKEAMEVGEATLK 136
                  58999**********998776665 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   1.3     0.086   1.3e+02       1      29 [.      31      59 ..      18      71 .. 0.72
   2 !   14.3   0.0   2.9e-05     0.044       1      59 [.      74     136 ..      74     142 .. 0.84

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.086
    PF13432.1  1 lalArallraGdydeAlaaleaalalaPe 29
                 l++A+ ++r +++ eA+   +a l + Pe
  MMETSP1325-20131115|10093_1 31 LKNAQKYYRVKNFLEAALEARAGLHAGPE 59
                 45677777777766666666666666665 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 2.9e-05
    PF13432.1   1 lalArallraGdydeAlaaleaalala..Peaaealll..laeallrlgrldeAaallraala 59 
                  + lA al+ +Gd++eA++  e++++     + +++l +  lae+l rlg+ +eA ++ +a l+
  MMETSP1325-20131115|10093_1  74 YTLATALMFDGDLKEAVEEAEKVREISdkEHTVDVLNGltLAETLSRLGQKKEAMEVGEATLK 136
                  679************************876688888772257777788******999998875 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.64   9.7e+02      28      34 ..      27      33 ..      12      52 .. 0.56
   2 ?   -0.5   0.2      0.71   1.1e+03      20      31 ..      36      47 ..      23      64 .. 0.54
   3 !   16.8   0.1   2.9e-06    0.0044       9      75 ..      74     137 ..      65     140 .. 0.81
   4 !    5.9   0.0    0.0073        11      10      39 ..     113     142 ..     103     150 .. 0.66

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.64
    PF13424.1 28 yekalel 34
                  e+ l+ 
  MMETSP1325-20131115|10093_1 27 AETRLKN 33
                 3332222 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.71
    PF13424.1 20 dydeAlelyeka 31
                 +y +  +++e a
  MMETSP1325-20131115|10093_1 36 KYYRVKNFLEAA 47
                 333333344444 PP

  == domain 3    score: 16.8 bits;  conditional E-value: 2.9e-06
    PF13424.1   9 nnlalvlrrlgdydeAlelyekalellrelgddhpdtaral..nnlanlylalgdydeAleylekAlei 75 
                  + la++l+  gd++eA e  ek+ e+      d   t+++l  + la+++ +lg+ +eA e  e  l+ 
  MMETSP1325-20131115|10093_1  74 YTLATALMFDGDLKEAVEEAEKVREIS-----DKEHTVDVLngLTLAETLSRLGQKKEAMEVGEATLKR 137
                  789********************9994.....344456666336899************9998888775 PP

  == domain 4    score: 5.9 bits;  conditional E-value: 0.0073
    PF13424.1  10 nlalvlrrlgdydeAlelyekalellrelg 39 
                   la++l rlg+ +eA e  e  l+ ++++ 
  MMETSP1325-20131115|10093_1 113 TLAETLSRLGQKKEAMEVGEATLKRIKQHN 142
                  567777777777777777777777765554 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.4      0.26   3.9e+02      11      36 ..      37      62 ..      25      75 .. 0.70
   2 ?    6.3   0.1     0.011        16       5      29 ..      74      98 ..      66     109 .. 0.81
   3 !    8.9   0.0    0.0015       2.3       5      31 ..     112     138 ..     106     148 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.26
    PF13428.1 11 llalGdpdeAiallrralalaPddae 36
                 + +  ++ eA+  +r+ l ++P+d +
  MMETSP1325-20131115|10093_1 37 YYRVKNFLEAALEARAGLHAGPEDGA 62
                 67777888888888888888898833 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.011
    PF13428.1  5 lalarallalGdpdeAiallrrala 29
                 + la al+  Gd++eA++ ++++ +
  MMETSP1325-20131115|10093_1 74 YTLATALMFDGDLKEAVEEAEKVRE 98
                 5789999999********9999865 PP

  == domain 3    score: 8.9 bits;  conditional E-value: 0.0015
    PF13428.1   5 lalarallalGdpdeAiallrralala 31 
                  l la+ l +lG+ +eA+++ ++ l++ 
  MMETSP1325-20131115|10093_1 112 LTLAETLSRLGQKKEAMEVGEATLKRI 138
                  579****************99998875 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   5.2e-05     0.079      29      80 ..      74     130 ..      14     134 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.2e-05
                  HHHHHHHHH---HHHHHHHHHC.TSHCH.CBHHHHH....HHHHHHHHTT-HHHHCCC CS
    PF12895.2  29 yalAlclylngeykrAyellrk.lelds.sslgcry....llArcllklgkydeAiav 80 
                  y+lA +l+  g+ k+A+e  +k  e+++ ++ +  +     lA++l  lg+ +eA +v
  MMETSP1325-20131115|10093_1  74 YTLATALMFDGDLKEAVEEAEKvREISDkEH-TVDVlnglTLAETLSRLGQKKEAMEV 130
                  566*****************88855544255.33334553779***********9875 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.032        49      17      33 ..      74      90 ..      66      91 .. 0.85
   2 ?    6.1   0.0     0.009        14      18      32 ..     113     127 ..     101     129 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.032
    PF13431.1 17 nnLAelllnnGdleeAe 33
                 + LA++l   Gdl+eA 
  MMETSP1325-20131115|10093_1 74 YTLATALMFDGDLKEAV 90
                 56889999*******96 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.009
    PF13431.1  18 nLAelllnnGdleeA 32 
                   LAe+l+++G+ +eA
  MMETSP1325-20131115|10093_1 113 TLAETLSRLGQKKEA 127
                  69***********99 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1         9   1.4e+04      18      24 ..      25      31 ..      25      31 .. 0.69
   2 ?   -3.0   0.2         9   1.4e+04      12      12 ..      50      50 ..      45      56 .. 0.49
   3 ?    9.7   0.0   0.00073       1.1       4      25 ..      73      94 ..      70      95 .. 0.88
   4 ?    4.2   0.0     0.045        68       6      21 ..     113     128 ..     111     130 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 9
                 ---HHHH CS
    PF07721.9 18 deArall 24
                 +eA++ l
  MMETSP1325-20131115|10093_1 25 AEAETRL 31
                 6888765 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 9
                 H CS
    PF07721.9 12 l 12
                 +
  MMETSP1325-20131115|10093_1 50 A 50
                 2 PP

  == domain 3    score: 9.7 bits;  conditional E-value: 0.00073
                 H---HHHHHH-------HHHHH CS
    PF07721.9  4 llaLArallalGdldeAralle 25
                  + LA al   Gdl eA + +e
  MMETSP1325-20131115|10093_1 73 GYTLATALMFDGDLKEAVEEAE 94
                 678***************9998 PP

  == domain 4    score: 4.2 bits;  conditional E-value: 0.045
                  --HHHHHH-------H CS
    PF07721.9   6 aLArallalGdldeAr 21 
                   LA++l +lG+  eA 
  MMETSP1325-20131115|10093_1 113 TLAETLSRLGQKKEAM 128
                  69*********99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       801  (0.0585869); expected 273.4 (0.02)
Passed bias filter:                      561  (0.0410328); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.42u 0.48s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 691.78
//
Query:       MMETSP1325-20131115|10096_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.3e-05   21.5   0.0    6.6e-05   21.4   0.0    1.0  1  PF10459.4 Peptidase S46


Domain annotation for each model (and alignments):
>> PF10459.4  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   4.8e-09   6.6e-05     380     445 ..       9      74 ..       2      99 .. 0.86

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 4.8e-09
    PF10459.4 380 ssellslarklvrlakerekpdaereegyqerdlerleksleriekdydaevdkavlaalLeeyae 445
                  +s+lls+  +l++++ e +kpd+ere +y+ r+++ + k+l++  kd+ ++ + a+l+  ++ + +
  MMETSP1325-20131115|10096_1   9 GSTLLSVGHALHEATVEAAKPDEERETAYRSRNIPFMIKRLAKRLKDLHPPHEAALLRRAVSMAVA 74 
                  4589*****************************************************998887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|10095_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       534  (0.0390579); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 1239.85
//
Query:       MMETSP1325-20131115|10098_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-05   22.6   6.8    3.5e-05   22.6   4.7    1.5  2  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   4.7   2.6e-09   3.5e-05      38     137 ..      12     119 ..       5     131 .. 0.74
   2 ?   -2.1   0.0     0.083   1.1e+03     151     166 ..     174     189 ..     161     201 .. 0.70

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 2.6e-09
   PF07690.11  38 ltlyslgyaiasllaGrlsdrf...Grrr.vlllglllfalg.lllllfa...sslwalllvlrvlqGlgagalfpagaaliadwfpkeergralgllsagfslGail 137
                  ++ +++  ++as+ aG   d     +rrr  +l  + l+++   ++l f+   ++  ++l+++ v +G+++ga+++++  l+ +wf +++ +r+++ l++g+++ + +
  MMETSP1325-20131115|10098_1  12 AASFTVSKLVASVYAGVAWDHApagSRRRdSILRNVPLTLALsQAVLGFGpllTNDNSILIFGLVTSGWATGAMTTLVPILVLEWFGRDRFMRMFSTLMTGSAVVMTF 119
                  4556666667777777766654443355544444444444443555556445688889*******************************************9987765 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.083
   PF07690.11 151 WravFlilailsllaa 166
                  +ra+F++  +++l a+
  MMETSP1325-20131115|10098_1 174 FRASFYVQLAMALGAL 189
                  7788888887777763 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 1109.62
//
Query:       MMETSP1325-20131115|10100_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-22   79.2   0.0    2.8e-22   79.0   0.0    1.0  1  PF03198.9  Glucanosyltransferase
  ------ inclusion threshold ------
      0.016   14.2   0.0       0.02   13.9   0.0    1.1  1  PF00150.13 Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> PF03198.9  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.0   0.0   4.1e-26   2.8e-22      54     188 ..      26     169 ..       9     177 .. 0.83

  Alignments for each domain:
  == domain 1    score: 79.0 bits;  conditional E-value: 4.1e-26
                  HHHHHHHHHHHH----EEEES---TTS--HHHHHHHHH---EEEEBS-BT...TBS--TTS-..---....HHHHHHHHHHHHHHTT-TTB---B----SS-STT-GG..GHHHHHHHHHHHHHHHHH.SSS------------T CS
    PF03198.9  54 esCkrDikllkelgintirvYavdpsknhdeCmklleeagiYvilDlsep...kesinradpassyn....adllervfkvidafkkyenvlgffaGnevindkenta..aaayvkavvrdvkeYikk.kkyrkipvGYsaadde 188
                  +  + D+++l+ l+intir+Y+vd +++h + m +++e giYv++ l+++       +r+ p   y     ++l+++ ++++ +f++y+n+l f a ne+  ++ ++   + + vka+vrdv+++  + ++ r++p  Y+++d+ 
  MMETSP1325-20131115|10100_1  26 DLWEADLPYLEALNINTIRLYEVDGTASHAKFMAAMAERGIYVVVPLTRTywgYLPADRSSPD-CYSgdegTNLVNSAKSIVRQFSEYDNTLFFTAANEIALNSGDAGytSLPCVKALVRDVHKFQDScSAMRSVPLLYAGQDIG 169
                  35689******************************************9985544567888884.4431222679999************************999886544999************9763678********99975 PP

>> PF00150.13  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     3e-06      0.02      63     150 ..      53     141 ..      30     149 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3e-06
                  HHHHHHHHHHTTT-EEEEEEEESSSS....G.-S-CCCTHHHHHHHHHHHHHHHHHHCTT-TTBEEEESSSS--TSS-TTBT-CCTTTBHHH CS
   PF00150.13  63 rveevvkyakenglyvildiHseegw....ltkadgnssedtaeeffkklwtqiAerykkndevvifelmNEPhgnntgaewtseeadevka 150
                  +  ++++++ e+g+yv++ + ++  w    + + ++ +++ ++   + +  + i  +++ +d+ + f  +NE   n+ +  + +++  +vka
  MMETSP1325-20131115|10100_1  53 SHAKFMAAMAERGIYVVVPLTRT-YWgylpADRSSPDCYSGDEGTNLVNSAKSIVRQFSEYDNTLFFTAANEIALNSGD-AG-YTSLPCVKA 141
                  55688999**************7.66655555555666666666666666999*******************9995543.33.455555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 853.10
//
Query:       MMETSP1325-20131115|10101_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00028   20.3   0.0    0.00031   20.2   0.0    1.0  1  PF07039.6 SGF29 tudor-like domain
     0.0003   20.4   0.3    0.00044   19.9   0.2    1.3  1  PF09038.5 Tumour suppressor p53-binding protein-1 Tudor
     0.0028   17.1   1.0     0.0028   17.1   0.7    1.6  2  PF09465.5 Lamin-B receptor of TUDOR domain
  ------ inclusion threshold ------
       0.12   11.7   2.0        4.9    6.5   1.4    2.7  2  PF07202.8 T-complex protein 10 C-terminus


Domain annotation for each model (and alignments):
>> PF07039.6  SGF29 tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   9.1e-08   0.00031      38     124 ..       2      81 ..       1      86 [. 0.79

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 9.1e-08
    PF07039.6  38 DvddeeekktyklsrkkiiplPkklsketsklaefpkgskVLAlYPdTtaFYkAtVvatpkkkedeykleFeddeeedkereVkkry 124
                  D d ++ +k +++  + i pl   + +++s  ++f +g k+ A+Y   + +Y + + +   +++++y++ ++d e+e   ++V++++
  MMETSP1325-20131115|10101_1   2 DIDYDDGEKEMSVREDLIKPLE--AASSSSGGSKFGEGDKIEARYRGKSRYYSGRIRRD--NRDGTYDIDYDDGEKE---MSVREDL 81 
                  5555544455555555555555..599999**************************998..9***********9965...5676655 PP

>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.2   1.3e-07   0.00044       6      43 ..      37      74 ..      31      84 .. 0.82

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1.3e-07
                 ----EEE-ST---BB---EEEE-----EEEE-----EE CS
    PF09038.5  6 glrvvakwssngyfysgkitkdagegkykllfddgyec 43
                 g ++ a++  +  +ysg+i +d  +g y + +ddg + 
  MMETSP1325-20131115|10101_1 37 GDKIEARYRGKSRYYSGRIRRDNRDGTYDIDYDDGEKE 74
                 66788999999************************654 PP

>> PF09465.5  Lamin-B receptor of TUDOR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       0.5   1.7e+03      41      50 ..       5      15 ..       2      20 .. 0.52
   2 !   17.1   0.7   8.1e-07    0.0028       3      54 ..      31      82 ..      30      83 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.5
    PF09465.5 41 YkDGt.eLeLk 50
                 Y DG  e+ ++
  MMETSP1325-20131115|10101_1  5 YDDGEkEMSVR 15
                 66663245555 PP

  == domain 2    score: 17.1 bits;  conditional E-value: 8.1e-07
    PF09465.5  3 grkyadGevvmGRWPGssLYYevkvlsfdsksqlYtviYkDGt.eLeLkesDi 54
                 g k+ +G+ +  R+ G s YY  ++   d+++  Y + Y DG  e+ ++e+ i
  MMETSP1325-20131115|10101_1 31 GSKFGEGDKIEARYRGKSRYYSGRIR-RDNRDGTYDIDYDDGEkEMSVREDLI 82
                 579********************986.6999***********53788887766 PP

>> PF07202.8  T-complex protein 10 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   1.4    0.0014       4.9     156     175 ..      46      65 ..       1      79 [. 0.66
   2 ?    1.7   0.0     0.043   1.5e+02      77      98 ..      65      86 ..      62      87 .] 0.81

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0014
    PF07202.8 156 qetryssGrvrvkdkdGkvi 175
                    +ry sGr+r  ++dG+  
  MMETSP1325-20131115|10101_1  46 GKSRYYSGRIRRDNRDGTYD 65 
                  34566666666666666543 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.043
    PF07202.8 77 ekrfkDGskeilfpdgtvkiln 98
                 ++ + DG+ke++  ++ +k l+
  MMETSP1325-20131115|10101_1 65 DIDYDDGEKEMSVREDLIKSLE 86
                 5679999999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 443.58
//
Query:       MMETSP1325-20131115|10102_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.37s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 220.07
//
Query:       MMETSP1325-20131115|10103_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 765.89
//
Query:       MMETSP1325-20131115|10106_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 823.75
//
Query:       MMETSP1325-20131115|10104_1  [L=333]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.2  11.5       0.17   11.4   8.0    1.4  1  PF10099.4 Anti-sigma-K factor rskA


Domain annotation for each model (and alignments):
>> PF10099.4  Anti-sigma-K factor rskA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   8.0   1.2e-05      0.17      10     101 ..     131     243 ..     122     252 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.2e-05
    PF10099.4  10 earlfaepa.................aaaaarsarlwr...rlrrWrglalaaaAaaavlalalllv....qataaaaqpaaapalvavlasadgqpalvvsvdadkgaltlvplg 101
                  +a+++a++a                     + ++  ++   r +   g+++aaaAaa+vla++++++     ++ ++ + aa++a+va +a + +++a+  ++ + ++++++ ++ 
  MMETSP1325-20131115|10104_1 131 LAQIRAQKAaqqgygggsrpmptpkvG---PNPSAGANgngRYNNNGGATAAAAAAAVVLAMVGAAAatrvVRADVEVTGAAPTAVVAAVAPTRAAVATATTATKPRRKVRVHSVM 243
                  555555555556666666655543221...11111122111222233444456666666666655558888677777788888888888888888888888888888888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       827  (0.0604886); expected 273.4 (0.02)
Passed bias filter:                      383  (0.0280135); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.64
# Mc/sec: 1246.85
//
Query:       MMETSP1325-20131115|10108_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.097   11.7   0.0      0.099   11.7   0.0    1.0  1  PF07062.7 Clc-like


Domain annotation for each model (and alignments):
>> PF07062.7  Clc-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.2e-06     0.099      89     138 ..      11      62 ..       4      73 .] 0.64

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 7.2e-06
    PF07062.7  89 dsavgeleth.kFygWhkavlilllislllaalsllsgica.svssseailf 138
                  + a +e  th  Fy W + +l  l i+ +l   ++l +i+a +v + ++ ++
  MMETSP1325-20131115|10108_1  11 QVAIEEAATHyDFYRWANITLASLTIAGVLLNGAVLYVIFAtPVLRRNTAML 62 
                  445555555526*********9999998888777777777624544444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.59
# Mc/sec: 296.50
//
Query:       MMETSP1325-20131115|10109_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       799  (0.0584406); expected 273.4 (0.02)
Passed bias filter:                      627  (0.0458602); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 662.82
//
Query:       MMETSP1325-20131115|10113_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 235.20
//
Query:       MMETSP1325-20131115|10111_1  [L=365]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-42  143.4   0.0      8e-42  142.5   0.0    1.5  1  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
    9.8e-42  142.0   0.2    1.6e-41  141.4   0.1    1.3  1  PF07479.9  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
    3.6e-08   32.8   0.0    5.9e-08   32.1   0.0    1.3  1  PF02558.11 Ketopantoate reductase PanE/ApbA
    2.8e-06   27.5   0.0    7.2e-06   26.2   0.0    1.7  1  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
    5.5e-06   26.0   0.0    1.6e-05   24.4   0.0    1.8  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
    2.8e-05   24.2   2.2    0.00013   22.1   0.0    2.7  3  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
     0.0032   17.4   0.0       0.01   15.8   0.0    1.8  2  PF01488.15 Shikimate / quinate 5-dehydrogenase
     0.0036   17.4   0.0      0.037   14.1   0.0    2.3  1  PF13241.1  Putative NAD(P)-binding
     0.0094   14.9   0.0      0.014   14.3   0.0    1.3  1  PF01494.14 FAD binding domain
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.028   14.2   0.0    1.7  1  PF02254.13 TrkA-N domain
      0.013   15.4   0.0      0.026   14.4   0.0    1.4  1  PF13460.1  NADH(P)-binding
      0.014   15.2   0.0      0.028   14.1   0.0    1.5  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
      0.014   15.3   0.0      0.023   14.6   0.0    1.3  1  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
      0.021   14.0   0.0      0.042   13.1   0.0    1.5  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
      0.025   13.3   0.0      0.051   12.3   0.0    1.4  1  PF02153.12 Prephenate dehydrogenase
      0.033   12.9   0.3      0.033   12.9   0.2    1.5  2  PF01266.19 FAD dependent oxidoreductase
      0.055   13.3   0.0       0.17   11.7   0.0    1.9  1  PF13450.1  NAD(P)-binding Rossmann-like domain
      0.083   12.1   0.1       0.33   10.1   0.0    2.0  1  PF07991.7  Acetohydroxy acid isomeroreductase, catalytic domain
      0.094   12.1   0.0       0.17   11.2   0.0    1.3  1  PF02744.12 Galactose-1-phosphate uridyl transferase, C-terminal domain
       0.14   12.1   0.0       0.37   10.8   0.0    1.7  1  PF13676.1  TIR domain


Domain annotation for each model (and alignments):
>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.5   0.0   1.2e-44     8e-42       2     156 ..      25     180 ..      24     181 .. 0.99

  Alignments for each domain:
  == domain 1    score: 142.5 bits;  conditional E-value: 1.2e-44
                  EEEE-------HHHHHHHTTEEEEEEE-S-HHHHHHHHHHTSBTTTBTT-B--TTEEEES-HHHHH----CEEE-S-HHHHHHHCCCHCCCHHCT-EEEE-----BTTT-B-HHHHHHHHS-GGG.EEEEE----HHHHHTT--EEEEEEESSHHH CS
   PF01210.18   2 vavlGaGswGtalAkvlaenghevrlWvreeklieeinerrenvkylpgiklpenlvattDleealkgadiivlvVPsqflrevlkklkgllkkdailvsltKGieegtlkllsevieeelpiea.iavlsGpslAeEvakgkptavviaskdkqa 156
                   +vlG+Gs+G  +A+vla++g  v++ vr+e+l++ +ne++++++yl + +l  ++  t+D ++al++a++iv +VP qf+r++lkk++++++++++++ ++KG+e+++l+l+ evie++l+++   a+lsGps+A+E+ +g+ tavv+as+d+++
  MMETSP1325-20131115|10111_1  25 FCVLGGGSFGLGIAQVLANKGIAVTVVVRKEELAKFMNEEHRHPRYLSDLTLNPSIFYTADYKTALQEATYIVHAVPVQFTRDFLKKVRKHIPPGTPVMCISKGVETKSLSLMCEVIEDLLGDQRsYAYLSGPSFAREIVEGMATAVVVASEDQAL 180
                  58*******************************************************************************************************************************************************987 PP

>> PF07479.9  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.4   0.1   2.3e-44   1.6e-41       1     148 [.     199     348 ..     199     349 .. 0.97

  Alignments for each domain:
  == domain 1    score: 141.4 bits;  conditional E-value: 2.3e-44
                  S-----HHHHHHHHHHHHHHHHH---HHHTCCHHHHHHHHHHHHHHHHHH----GG.GG--------CCCCHT-TTSHHHH--------.--HHHHHHCH..SS-----CCHHHHHHHHHHCT-......--HHHHHHHHHHHS---HHHCHHH CS
    PF07479.9   1 eDvvgveiagalKNViAiaaGivdglglgdntkaalitrglaEikklakllgeeeektflelaGlgDlivTclselgRNrrvgealakggksleeiekellegqvveGvktakevyellkkkel......kvplleavykilyeelkveeviee 148
                  +Dvvgve++ga+KNV+A+aaG+ dglglg+n+ aal+trgl E++++ + lg++++ t+++l+G gD+++Tc++ l+RNr++g +l+kg ++l++i +++   +v+eGv+ta+++ +l kk++       k p++  v ++l  ++++e+ +++
  MMETSP1325-20131115|10111_1 199 TDVVGVEVGGAVKNVLALAAGMSDGLGLGSNALAALVTRGLVEMRRVSTFLGGRSS-TLSGLSGCGDTFLTCFGPLSRNRNFGLRLGKG-ERLKDILEST--TEVAEGVETAMALAKLIKKSDKsfrcdlKYPIIFGVAQVLEGKMTPEQGLNQ 348
                  69*****************************************************9.********************************.9999999999..9******************999999999******************998876 PP

>> PF02558.11  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   8.7e-11   5.9e-08       2     107 ..      26     132 ..      25     150 .. 0.90

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 8.7e-11
                  EEE-----------HHHHHHH-EEEE----HHHHHH----EEE-SS-EEE---SEEES-T..TT----SEEEE--SSS-S----TTTGGG-----EEEE------HH CS
   PF02558.11   2 ailGaGaiGsllaakLakagadvtlilrsrrlealkknglrlksdkgeeivrppealsee.kqelepidllivtvKayqteealeelkplldpntvvlllqNGlghe 107
                  ++lG G+ G  +a  La++g  vt+++r+++l+++ ++  r  +   + ++ p   ++++ k  l+++ +++ +v  + t + l+++++++ p t+v+++  G++++
  MMETSP1325-20131115|10111_1  26 CVLGGGSFGLGIAQVLANKGIAVTVVVRKEELAKFMNEEHRHPRYLSDLTLNPSIFYTADyKTALQEATYIVHAVPVQFTRDFLKKVRKHIPPGTPVMCISKGVETK 132
                  8*****************************888866666666666678888888888888999**************************************999876 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   1.1e-08   7.2e-06       2      84 ..      25     116 ..      24     126 .. 0.89

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 1.1e-08
   PF03807.12   2 igiiGaGnigealakglaaagaqkheviiaasrspekaeelaeelg.............vkvtavsneeaaeeadvvilavkpedveevlael.kea 84 
                  ++++G+G++g ++a+ la++g     v+++  r++e a+ + ee               +  ta ++++a++ea+ ++ av+ + ++++l+++ k+ 
  MMETSP1325-20131115|10111_1  25 FCVLGGGSFGLGIAQVLANKG---IAVTVV-VRKEELAKFMNEEHRhprylsdltlnpsIFYTA-DYKTALQEATYIVHAVPVQFTRDFLKKVrKHI 116
                  579******************...999977.9*9999999988888***********9665555.**************************996655 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   2.4e-08   1.6e-05       3     110 ..      26     122 ..      24     139 .. 0.79

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 2.4e-08
                  EEE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHHHHHTTCH.....HHHHHHHHHCEEEESSGCCGG.G-SEEEE-S-SSHHHHHHHHHHHHCCS.TTSEE CS
   PF02737.13   3 aVvGaGtmGagiAavfaragleVvlvdiseealekalerieksleklvekgklkeeeveevlarisvttdleeav.dadlviEavvEnlelKrelfaelekvakpeail 110
                   V+G G  G giA+v+a++g+ V++v ++ee ++  +e+ ++   +  +  +        +   i +t+d+++a  +a +++ av+  +++ r++++++ k+++p++ +
  MMETSP1325-20131115|10111_1  26 CVLGGGSFGLGIAQVLANKGIAVTVVVRKEELAKFMNEEHRH--PRYLSDLT--------LNPSIFYTADYKTALqEATYIVHAVP--VQFTRDFLKKVRKHIPPGTPV 122
                  59************************9999999888888777..34433333........33677888888888888999999998..666788888888888888766 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   1.9e-07   0.00013       3      41 ..      26      64 ..      24      69 .. 0.93
   2 ?   -0.1   0.0       1.6   1.1e+03      36      70 ..     174     208 ..     162     217 .. 0.69
   3 ?   -1.0   0.1       3.1   2.1e+03      11      23 ..     302     314 ..     300     316 .. 0.84

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 1.9e-07
                 EEE---HHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHH CS
   PF00070.22  3 vvvGGGyiGlElAaalaklgkkVtvierrdrllraldee 41
                 +v+GGG  Gl  A++la+ g  Vtv+ r+++l + ++ee
  MMETSP1325-20131115|10111_1 26 CVLGGGSFGLGIAQVLANKGIAVTVVVRKEELAKFMNEE 64
                 79******************************9999887 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 1.6
                  TTSSHHHHHHHHHHHHHTTEEEETTEEEEEEEESE CS
   PF00070.22  36 raldeeiakilqkklekngievllntkveeiegsa 70 
                    +d+ +a+ l k l+++  +v + t v+ +e  +
  MMETSP1325-20131115|10111_1 174 ASEDQALASDLSKFLSSEDFRVFTTTDVVGVEVGG 208
                  56677777788888888888888888888888332 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 3.1
                  HHHHHHHHHHTTS CS
   PF00070.22  11 GlElAaalaklgk 23 
                  G+E A alakl k
  MMETSP1325-20131115|10111_1 302 GVETAMALAKLIK 314
                  9*******99855 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.5e-05      0.01      12      58 ..      22      67 ..      13     124 .. 0.81
   2 ?   -2.3   0.0       5.5   3.8e+03      30      68 ..     162     200 ..     158     208 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 1.5e-05
                 --EEEEE----HHHHHGGG--TTT-E.EEE----HHHHHHHHHHH.. CS
   PF01488.15 12 gkkvlviGAGemarlvakhLlekgvkkiviaNRtaekakeLaeelgg 58
                 g++++v+G+G  +  +a++L++kg++ ++++ R +e ak + ee++ 
  MMETSP1325-20131115|10111_1 22 GQQFCVLGGGSFGLGIAQVLANKGIA-VTVVVRKEELAKFMNEEHRH 67
                 6899**********************.*******9999999888833 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 5.5
                  G--TTT-E.EEE----HHHHHHHHHHH...T-EE---S- CS
   PF01488.15  30 hLlekgvkkiviaNRtaekakeLaeelggeevealplee 68 
                   ++e  ++++v+a  +++ a +L + l++e +++ + ++
  MMETSP1325-20131115|10111_1 162 EIVEGMATAVVVASEDQALASDLSKFLSSEDFRVFTTTD 200
                  566677788888888888888888888777777766655 PP

>> PF13241.1  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   5.3e-05     0.037       7      65 ..      22      97 ..      20     200 .. 0.61

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.3e-05
                 T-EEEEE-------HHHHHHTT---EEEEE-SS--TT-..........T.............................-TT--EEEE CS
    PF13241.1  7 gkkvlvvGgGevAarkvrklleagakvtvvspeikele..........elvklaeee..................feedlegadlvi 65
                 g++ +v GgG+ ++  ++ l+++g  vtvv  +  el                   +                  +   l++a  ++
  MMETSP1325-20131115|10111_1 22 GQQFCVLGGGSFGLGIAQVLANKGIAVTVVVRKE-ELAkfmneehrhpR-------YlsdltlnpsifytadyktA---LQEATYIV 97
                 57889************************99993.33312222222330.......13333333344433333330...33333333 PP

>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0     2e-05     0.014       5      38 ..      26      59 ..      23     126 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2e-05
                 EE--------HHHHHHHHH.HHEEEEESSSCCCH CS
   PF01494.14  5 lIVGaGpaGlmlallLseaGvrvvlvekhsttvv 38
                 ++ G+G  Gl  a++L+++G+ v++v + ++ ++
  MMETSP1325-20131115|10111_1 26 CVLGGGSFGLGIAQVLANKGIAVTVVVRKEELAK 59
                 799***********************99987665 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.1e-05     0.028       1      41 [.      25      65 ..      25      93 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 4.1e-05
                 EEEE---HHHHHHHCCCHH--..EEEEES-HHHHHHHHH-- CS
   PF02254.13  1 iiiiGlGrvGrslaeeLregekdvvvidkdeerveelreeg 41
                 ++++G G +G  +a+ L +++  v+v+ ++ee ++ ++ee 
  MMETSP1325-20131115|10111_1 25 FCVLGGGSFGLGIAQVLANKGIAVTVVVRKEELAKFMNEEH 65
                 689****************8867********9999988776 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.7e-05     0.026       3      69 ..      27     101 ..      26     127 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 3.7e-05
    PF13460.1   3 viGAtGktGrrivkellarghevtalvRnpsklpe...ssgvtivkkDlfdl......edlaealagvdvvvdafg 69 
                  v+G+ G  G  i++ l+++g+ vt++vR+++ ++    +++ + +  Dl+        +d++ al+++ ++v+a++
  MMETSP1325-20131115|10111_1  27 VLGG-GSFGLGIAQVLANKGIAVTVVVRKEELAKFmneEHRHPRYLSDLTLNpsifytADYKTALQEATYIVHAVP 101
                  7887.*************************9444476634444443443221244444999999999999999997 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   4.2e-05     0.028       2      89 ..      23     122 ..      22     137 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.2e-05
                  BEBEEB-------HHHHHHHH---EEEE--SSHHHHHHHHHTT...............EEE-SSHHHHHHHBSEEEE-SSSHHHHHHHHHH.HCCC-----EE CS
   PF03446.10   2 kkigfiGlGvMGspmalnllkagyevavynrtkekveelvaeg...............akaaesieelvasldvvilmvkagkavdeviegellealekgdil 89 
                  +++ ++G G  G  +a+ l+++g+ v+v+ r+ e+++++++e+               +  +++ + +++++  ++  v+  + +++++++ + +++ +g+ +
  MMETSP1325-20131115|10111_1  23 QQFCVLGGGSFGLGIAQVLANKGIAVTVVVRK-EELAKFMNEEhrhprylsdltlnpsIFYTADYKTALQEATYIVHAVPV-QFTRDFLKK-VRKHIPPGTPV 122
                  57899*************************99.677777777769999999999999988999999999999999999987.567777777.77777777755 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   3.4e-05     0.023       1      52 [.      26      81 ..      26     101 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3.4e-05
    PF13738.1  1 lVvGAGaaGlafadnlleegatpliivDrnakpGghwlkaysfvrlhq.....psff 52
                 +V+G+G  Gl++a  l ++g++ + +v r+++ ++++++  ++ r+ +     ps+f
  MMETSP1325-20131115|10111_1 26 CVLGGGSFGLGIAQVLANKGIA-VTVVVRKEELAKFMNEEHRHPRYLSdltlnPSIF 81
                 8*********************.99999999************99988333333333 PP

>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.1e-05     0.042       3      86 ..      25     102 ..      23     113 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.1e-05
                  EEEE------------TTT---EEE---S-HHHHHHHH----SS-----HHHHH-------B-----HHHHHHT-SEEEE---- CS
    PF03721.9   3 iaviGlGYvGlptavvlaekghevvgvDineekvdklnsgkipiyEpgleellkknveegrlrfttdvkeavkeadvifiavgT 86 
                   +v+G G  Gl  a vla+kg+ v++v  +ee  + +n+++ +    +l++l      + +++ t d+k+a++ea  i+ av+ 
  MMETSP1325-20131115|10111_1  25 FCVLGGGSFGLGIAQVLANKGIAVTVVVRKEELAKFMNEEHRH--PRYLSDLTL----NPSIFYTADYKTALQEATYIVHAVPV 102
                  69************************98777776666665443..234444444....44589999999999999999988885 PP

>> PF02153.12  Prephenate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.5e-05     0.051      40      76 ..      87     123 ..      73     145 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 7.5e-05
   PF02153.12  40 ieavkeadivvlavPvevvlevlkelaphlkeaalit 76 
                    a++ea  +v avPv+ +++ lk++ +h+  +  ++
  MMETSP1325-20131115|10111_1  87 KTALQEATYIVHAVPVQFTRDFLKKVRKHIPPGTPVM 123
                  4789*************************98887666 PP

>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   4.9e-05     0.033       3      31 ..      26      54 ..      24      60 .. 0.87
   2 ?   -3.8   0.0       5.7   3.9e+03     145     180 ..     176     210 ..     161     221 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.9e-05
                 EEE----HHHHHHHHHHHTT-EEEEEESS CS
   PF01266.19  3 viiGgGivGlstAyeLarrglkVtllekg 31
                 ++ GgG +Gl++A  La  g+ Vt++ + 
  MMETSP1325-20131115|10111_1 26 CVLGGGSFGLGIAQVLANKGIAVTVVVRK 54
                 89*******************99999766 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 5.7
                  EHHHHHHHHHHHHHHG--EEEESEEEEEEEEETTCE CS
   PF01266.19 145 dpaklvkalaraaeelGveiiegtkVtglereggrv 180
                  ++++l+  l + +     ++++ t V+g+e+ gg v
  MMETSP1325-20131115|10111_1 176 EDQALASDLSKFLSSEDFRVFTTTDVVGVEV-GGAV 210
                  4556666666667777778888888888884.4444 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00026      0.17       1      55 [.      27      84 ..      27      93 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00026
    PF13450.1  1 IvGaGlsGlvaAylLakagkdvlvlekrdrlGGraasvev.dg..irvdygahifhgs 55
                 ++G+G +Gl +A+ La++g  v+v+ + ++l   +  +++ +     + + ++if + 
  MMETSP1325-20131115|10111_1 27 VLGGGSFGLGIAQVLANKGIAVTVVVRKEELAKFMNEEHRhPRylSDLTLNPSIFYTA 84
                 79**********************9887777666665555344444444556666665 PP

>> PF07991.7  Acetohydroxy acid isomeroreductase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00049      0.33       5      87 ..      23     118 ..      21     134 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00049
                  --EEEE-------HHHHHHHH----EEE------..............HHHHHHHH---EE--HHHHHHT-SEEEE-S-GGG---HHHHHTGGG--- CS
    PF07991.7   5 kkiaviGyGsqGhaqalnlrdsgldvvvglregs..............ksvekakkdgfevltveeavkkadvvmiliPDelqkevyekeiepnlke 87 
                  ++ +v+G Gs G   a+ l + g+ v+v +r+++               s  + + + f  ++++ a ++a  ++  +P ++ ++ + k++++++  
  MMETSP1325-20131115|10111_1  23 QQFCVLGGGSFGLGIAQVLANKGIAVTVVVRKEElakfmneehrhpryLSDLTLNPSIFYTADYKTALQEATYIVHAVPVQFTRDFL-KKVRKHIPP 118
                  6789***************************99966665555554432222333444566666777777777777777777776666.566666555 PP

>> PF02744.12  Galactose-1-phosphate uridyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00025      0.17      58      98 ..     286     328 ..     280     345 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00025
   PF02744.12  58 kdevlslaeladkekedlaa..ivkkiarrrdnlfetsfeysl 98 
                  +++ ++++e + + +e++ +  ++ k++++ d+ f ++ +y++
  MMETSP1325-20131115|10111_1 286 GERLKDILESTTEVAEGVETamALAKLIKKSDKSFRCDLKYPI 328
                  6788999999999888887766999****************97 PP

>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00054      0.37       4      34 ..     172     202 ..     169     222 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00054
    PF13676.1   4 SyasedrelaealaeaLeragirvfldrdia 34 
                    ased++la++l + L+++ +rvf   d+ 
  MMETSP1325-20131115|10111_1 172 VVASEDQALASDLSKFLSSEDFRVFTTTDVV 202
                  5689*********************974443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.75u 0.42s 00:00:01.17 Elapsed: 00:00:00.61
# Mc/sec: 1433.89
//
Query:       MMETSP1325-20131115|10112_1  [L=376]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.6e-138  461.6   2.3   1.9e-138  461.4   1.6    1.0  1  PF06068.8  TIP49 C-terminus
  ------ inclusion threshold ------
      0.012   15.5   0.0      0.045   13.7   0.0    2.0  2  PF13401.1  AAA domain
        2.4    7.5   8.9        5.4    6.4   6.2    1.6  1  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  461.4   1.6  4.2e-142  1.9e-138      78     397 ..       1     313 [.       1     314 [. 0.98

  Alignments for each domain:
  == domain 1    score: 461.4 bits;  conditional E-value: 4.2e-142
    PF06068.8  78 vpfvalsgsevyslevkktevltqalRksigvrikeekevleGevveleveeaenplskekkikevkitlkttkeekklklgskiieelqkekvkegDvivieketGkvkklGrsearakefDi..ekdefvelPkGevekkkevvqevtLhdlDvanarpqdllslllqllkgkkteiteklReeinkkvakyveegkaeivpGvlfiDevhmlDiecfsylnraleselaPivilatnrgiakirGtdiksphGipvDlldRlliiktepytkeeikkilkiRakeeeikldeealdllakigiktsLRyaiqLltpaki 397
                  +pf++++gse+ysle++ te+ltqa+R+sigvri ee++++eGevve++v   +++++   + k+ +itl tt++e+ ++lg+++ie+lqkekv++gDvi+i+k++G+++klGrs+++++++D+  ++++fv++P+Ge++k+kevv+ v+Lh++Dv+n+r+q++l+l+     g+++ei++++Re+i++kva+++eegka ivpGvlfiDevhmlDiecfs+lnrales+++P++++atnrgiakirGt++ksphGip+DlldRl+ii+t+py++ e+k+il+iR++ee+++++ +al+ll++igi+tsLRyai+++ +a++
  MMETSP1325-20131115|10112_1   1 TPFTTIAGSEIYSLEMSTTEALTQAFRRSIGVRIVEETDIIEGEVVEIQV---DTEVT--GADKTGRITLCTTEMETVYDLGPQMIESLQKEKVTAGDVITIDKAAGRITKLGRSFTHSHDYDAmgAQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALF----AGDTGEIKSEVREQIDTKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMSPVLVIATNRGIAKIRGTQYKSPHGIPIDLLDRLMIISTTPYSEAETKRILEIRCEEEDVEMTPDALELLTRIGIETSLRYAIHMIMAASL 313
                  69**********************************************99...44444..56799***********************************************************999*****************************************....9************************************************************************************************************************************************99875 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       0.6   2.7e+03      71      96 ..      72     100 ..      20     102 .. 0.75
   2 ?   13.7   0.0   9.8e-06     0.045      42     129 ..     148     236 ..     105     238 .. 0.64

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.6
    PF13401.1  71 tteellealqealrrrrt...rlliiDEa 96 
                  t  +l  ++ e l+++++   +++ iD a
  MMETSP1325-20131115|10112_1  72 TVYDLGPQMIESLQKEKVtagDVITIDKA 100
                  55666777778888888788888888866 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 9.8e-06
    PF13401.1  42 fveapastspkellqkllsalglpakg.rltteellealqealrrrrt........rlliiDEaqrLseealeelrsllddetgvklvlvGtp.elek 129
                   +++ +s  ++++l  +++  g+ +++ r + ++ ++  +       +        ++l iDE++ L  e++++l + l+ +   +++++ t+ +++k
  MMETSP1325-20131115|10112_1 148 EIDVINSR-QQGFLALFAGDTGEIKSEvREQIDTKVAEWR-------EegkativpGVLFIDEVHMLDIECFSWLNRALE-SDMSPVLVIATNrGIAK 236
                  44444444.5566666666666555552222222222222.......13335777********************88888.77777777777767766 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   6.2    0.0012       5.4     109     136 ..     348     375 ..     319     376 .] 0.57

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0012
                  .........----XXXXXXXXXXXXXXX CS
   PF03066.10 109 leedesldeeddeedeeeeddeedddee 136
                   +++  ++e  de+++eee++e++d+ee
  MMETSP1325-20131115|10112_1 348 YQNEFMFNEIGDEDEDEEEEEEDEDEEE 375
                  4444444443333333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       617  (0.0451287); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.42s 00:00:01.14 Elapsed: 00:00:00.56
# Mc/sec: 1608.98
//
Query:       MMETSP1325-20131115|10115_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-18   66.9   0.0    1.7e-18   66.6   0.0    1.1  1  PF00644.15 Poly(ADP-ribose) polymerase catalytic domain
      7e-11   41.7   0.0      1e-10   41.2   0.0    1.2  1  PF02877.9  Poly(ADP-ribose) polymerase, regulatory domain


Domain annotation for each model (and alignments):
>> PF00644.15  Poly(ADP-ribose) polymerase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.6   0.0   2.5e-22   1.7e-18       1      82 [.      80     164 ..      80     165 .] 0.91

  Alignments for each domain:
  == domain 1    score: 66.6 bits;  conditional E-value: 2.5e-22
                  CTEEEEE--TTSHHHHHHHHHHHHTS-TTTT....EEEEEEEEEEEE---CCCCGCCGGSS-EEEEEE---GGG------------ CS
   PF00644.15   1 Lkcklepldkkseeykeiekylkktrdstha....klkileifrvqregeaerfqekkklrnrrlLwHGsrltnvasilsqGLria 82 
                  L++ ++pl+ +s++ + i+kyl+  +   h     +lk+++ f v+r ge +rf+++  ++nr+lLwHGsrl+n+a+ilsqG+r+a
  MMETSP1325-20131115|10115_1  80 LNATITPLSPDSHDWAVIAKYLEVGQP-IHFegqkTLKLIDAFAVERAGERQRFATFATKSNRMLLWHGSRLSNFAGILSQGMRVA 164
                  6789*****************987655.3333677************************************************986 PP

>> PF02877.9  Poly(ADP-ribose) polymerase, regulatory domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   1.5e-14     1e-10      64     124 ..       8      69 ..       3      78 .. 0.84

  Alignments for each domain:
  == domain 1    score: 41.2 bits;  conditional E-value: 1.5e-14
                  ----HHHHHHHHHHHHS-B-------.----SHHHHHHHHHHHHH---HHHHHHHT---TT- CS
    PF02877.9  64 ksksaleelsneFYtlIPhdfgmkkp.pvldteeklkeklellealsdieiatkllkeekee 124
                  +++ ++++ls+eFY+ IPh   +++p p++d+++ + ek++ll++l+++ +at l+  +k++
  MMETSP1325-20131115|10115_1   8 RRRLEMQALSSEFYSAIPHLVRVSEPlPIIDNAQLIAEKVQLLQSLEQVVVATGLMMGRKSD 69 
                  56778999**************988647**************************99877643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 841.27
//
Query:       MMETSP1325-20131115|10116_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|10117_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 536.58
//
Query:       MMETSP1325-20131115|10121_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 292.89
//
Query:       MMETSP1325-20131115|10122_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.0   8.1       0.16   11.8   5.6    1.2  1  PF14265.1 Domain of unknown function (DUF4355)


Domain annotation for each model (and alignments):
>> PF14265.1  Domain of unknown function (DUF4355)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   5.6   1.2e-05      0.16      20      67 ..      13      63 ..       2      76 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.2e-05
    PF14265.1 20 ekakwekeqqek.....keeaeklakmsaeekaekeleklkkeleelkaelar 67
                 ++a+ ++e+         + ++++ km +ee++e+e++kl+++l+++ ++ a 
  MMETSP1325-20131115|10122_1 13 KEARLQQEN--SltgilTSVGKAIVKMGEEERKEQEEQKLNRKLAQKLKAMAL 63
                 334444443..13355555559***********************99887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1559  (0.114029); expected 273.4 (0.02)
Passed bias filter:                      945  (0.0691194); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.44s 00:00:00.83 Elapsed: 00:00:00.63
# Mc/sec: 296.69
//
Query:       MMETSP1325-20131115|10120_1  [L=301]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-13   48.9   0.0    5.9e-13   48.2   0.0    1.3  1  PF02617.12 ATP-dependent Clp protease adaptor protein ClpS


Domain annotation for each model (and alignments):
>> PF02617.12  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   0.0   4.3e-17   5.9e-13       3      81 ..      65     137 ..      63     143 .. 0.93

  Alignments for each domain:
  == domain 1    score: 48.2 bits;  conditional E-value: 4.3e-17
   PF02617.12   3 epkqykViLlNDdvhtmefVievLqkvfgmteeqAeqimlevhreGravvgvgtleeaetkveqvqrkgrekgsPLsat 81 
                  +++  k +L++D+v+t ++V ++L  ++++  ++A ++m ++h++G+++vg+ + e++e ++ q++++g      L ++
  MMETSP1325-20131115|10120_1  65 RAPYSKLMLFDDPVNTRSYVARMLAVICQLRDSDAFRVMNTAHQSGQCAVGTWPGERCELYALQMRDAG------LVVE 137
                  6666789************************************************************99......6665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1288.04
//
Query:       MMETSP1325-20131115|10124_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|10118_1  [L=207]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-29  102.2   0.0    3.9e-29  101.7   0.0    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.7   0.0   2.9e-33   3.9e-29      10     155 ..      50     191 ..      41     192 .. 0.78

  Alignments for each domain:
  == domain 1    score: 101.7 bits;  conditional E-value: 2.9e-33
                  XXXXX.XXXXXX.---...-TTTTT--------TTT------------------S--TT--...STT---.----S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT------- CS
   PF00504.16  10 pgdlg.fDplglskdp...tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpa..waeagg.lslptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                  ++++g +Dplg+s+ +   ++  +reaEl+HGR+AM+a+lG++v+  +  l++ + +++ p+  +   ++ ++lp +++lqi+++igfle+   +  k++        + pG+l     +l  ++++ + ++++kE++nGRlAM+a++gf++q 
  MMETSP1325-20131115|10118_1  50 TAPFGyWDPLGFSQGKtldQMVSYREAELKHGRIAMAATLGWIVQPGFHPLAK-DCHIKDPTdpL---KTlYELPPAGFLQIFIFIGFLEFLGLKI-KEN------PTYAPGDL-LGASELVdNTDAGWVDYQQKELNNGRLAMFAIMGFWIQD 191
                  57888********87789999*************************6655543.33344343221...232359999999***********74433.332......2577**96.66666666999999***********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.59
# Mc/sec: 840.76
//
Query:       MMETSP1325-20131115|10125_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0011   18.5   0.0     0.0019   17.8   0.0    1.3  1  PF08513.6 LisH
  ------ inclusion threshold ------
       0.14   12.4   1.9       0.19   12.0   1.3    1.1  1  PF11716.3 Mycothiol maleylpyruvate isomerase N-terminal domain


Domain annotation for each model (and alignments):
>> PF08513.6  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   2.7e-07    0.0019       5      26 ..      52      73 ..      52      74 .. 0.91

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 2.7e-07
                 HHHHHHHHH---HHHHHH---T CS
    PF08513.6  5 rLIydYLvksGyketAeaFakE 26
                 +++  YLv +Gy e+A+a++ +
  MMETSP1325-20131115|10125_1 52 QMVAQYLVREGYAESARALETD 73
                 6899***************976 PP

>> PF11716.3  Mycothiol maleylpyruvate isomerase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.3   2.8e-05      0.19      31      99 ..      22      99 ..      21     103 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHHHHHHHHHHHH..HH------.SSS.-HHH.........HHHHH----S-HHHHHHHHHHHHHHHHHH CS
    PF11716.3 31 vadlvaHlarsaralaaalageaaesglardaaaplvtaa.........aeavdlaaslapeallaafraavtrlaaa 99
                 v d+vaH a+ + +l+a l++    ++  r+++a + +++         +++ +  +  +p +l++a +++  ++aa+
  MMETSP1325-20131115|10125_1 22 VFDVVAHQAADDGRLEAQLDEMPVPRRALRQMVAQYLVREgyaesaralETDTQSMPMNPPSRLRDAADGGNSSAAAT 99
                 78****************966655555555555555444469999999999999999999999999999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 493.10
//
Query:       MMETSP1325-20131115|10123_1  [L=499]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.4e-33  113.4   0.0    1.3e-32  112.9   0.0    1.2  1  PF07059.7 Protein of unknown function (DUF1336)
  ------ inclusion threshold ------
      0.054   13.3   0.1       0.12   12.2   0.1    1.5  1  PF05106.7 Phage holin family (Lysis protein S)
       0.14   11.3   2.4       0.35   10.1   1.7    1.6  1  PF08693.5 Transmembrane alpha-helix domain


Domain annotation for each model (and alignments):
>> PF07059.7  Protein of unknown function (DUF1336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.9   0.0   2.9e-36   1.3e-32       1     226 [.     197     447 ..     197     448 .. 0.85

  Alignments for each domain:
  == domain 1    score: 112.9 bits;  conditional E-value: 2.9e-36
    PF07059.7   1 wsepdpstfkvRgktYlkdkkKvpaeapllkligvdlfksskkldeiakqlelevqkaakk....kvpfvlvvnlqvPdyaaavffekd.gegyslvlyfkleepvek........easpafkellerflkgdevedaFrrerlKiiakivkgswivkklv...ynekpvlvgkrlqtkyv........rgenylEidvdihs..ssvarkilelvlgylkklvlDlalliegqteeELPErvLgavrlnki 226
                  w+ ++ps f+vRg +Ylkdk K+pa++pl++ +  d + s+  +d+ia ++ l+  +  ++    +vp +l+vn+q+P  + a+f+++   ++ ++++y +++e   k           p   +ll+ + ++   ed+  r  lK+i+ i +   i   +    yn kpvl+ ++  ++          rg++y+Eid+d+++  s+va+ ++  +lg   kl+ D+a++ eg++ + LPE  L ++rl ++
  MMETSP1325-20131115|10123_1 197 WARIPPSDFQVRGPNYLKDKIKQPAGEPLFSTLNGDCVISDGPMDHIAARMTLPGCHLPDNlidpHVPPMLIVNIQIPVHPRAIFGARRlPPTVNAAFYLQMTEATAKaleslrsgGPAPGPVKLLKTWCENA-EEDEALRGCLKLIGLIQNLAEINAPSFvsgYNGKPVLMSEAGMSTAKrkgiaeifRGPGYIEIDIDVAKgfSYVAQRGVCWMLGTADKLIADIAFVLEGREDDLLPECPLACMRLDHM 447
                  99**************************************************9999888887777999*****************6666599*******8888877776755554545566789******966.567777889*********655555444499*******9765433222233344449999*********99*********************************************987 PP

>> PF05106.7  Phage holin family (Lysis protein S)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   2.6e-05      0.12      42      87 ..      44      91 ..      17     103 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 2.6e-05
    PF05106.7 42 sirrtlleallCglltlaivsll..ellglpaslavfigglvGflGve 87
                 +    l+e  l g+l l ++sl+  +l ++ ++++v++g++vG+l + 
  MMETSP1325-20131115|10123_1 44 TTAANLFEQFLTGALWLQVRSLVirTLHNITSHFSVAVGVVVGVLAIA 91
                 566789***************9988999***************99665 PP

>> PF08693.5  Transmembrane alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.7   7.7e-05      0.35      13      26 ..      79      92 ..      70      93 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 7.7e-05
    PF08693.5 13 IAvgVviPVgvIal 26
                 +AvgVv++V++Ia+
  MMETSP1325-20131115|10123_1 79 VAVGVVVGVLAIAV 92
                 9***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.84u 0.35s 00:00:01.19 Elapsed: 00:00:00.64
# Mc/sec: 1868.41
//
Query:       MMETSP1325-20131115|10127_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|10129_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|10130_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.41s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 265.78
//
Query:       MMETSP1325-20131115|10132_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        69  (0.00504681); expected 273.4 (0.02)
Passed bias filter:                       69  (0.00504681); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.45
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|10133_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.78    9.9   4.5        2.1    8.5   3.2    1.9  1  PF13822.1 Acyl-CoA carboxylase epsilon subunit


Domain annotation for each model (and alignments):
>> PF13822.1  Acyl-CoA carboxylase epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.2   0.00016       2.1       8      39 ..      13      44 ..      12      65 .. 0.88

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00016
    PF13822.1  8 rGnPtpeElAALtaVLaalaaaaaaaaaapra 39
                 +G P+peE+A L a  a + ++a+++++ p++
  MMETSP1325-20131115|10133_1 13 KGKPSPEEIARLKAEAAERKKNAPPKEKGPAE 44
                 8***********99999999999999888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       470  (0.0343768); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 298.41
//
Query:       MMETSP1325-20131115|10131_1  [L=345]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-11   43.6   6.3    3.9e-06   26.2   1.8    3.8  4  PF13414.1  TPR repeat
    4.7e-11   42.9  14.5    2.6e-07   31.0   4.3    3.8  4  PF13432.1  Tetratricopeptide repeat
    4.1e-09   36.1  17.2     0.0052   17.2   1.3    5.9  6  PF13428.1  Tetratricopeptide repeat
    2.9e-07   29.7  12.7     0.0025   17.4   0.3    5.2  6  PF07719.12 Tetratricopeptide repeat
    3.9e-07   29.7  11.4    1.7e-05   24.5   0.7    4.5  5  PF13424.1  Tetratricopeptide repeat
    2.7e-06   26.6   0.0       0.28   10.9   0.0    4.2  4  PF13181.1  Tetratricopeptide repeat
    0.00011   22.0   0.7       0.79    9.9   0.0    5.0  5  PF13431.1  Tetratricopeptide repeat
     0.0031   16.9  10.0     0.0044   16.4   0.1    4.5  5  PF00515.23 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.058   13.4   0.1       0.13   12.3   0.1    1.6  1  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
       0.49   10.8   0.1       0.49   10.8   0.1    5.1  4  PF07721.9  Tetratricopeptide repeat
        3.8    8.0   5.2    1.3e+02    3.2   0.0    4.2  4  PF13174.1  Tetratricopeptide repeat
        4.4    7.1   7.5          1    9.1   0.5    2.9  3  PF13371.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       2.1   2.4e+03      35      48 ..       8      21 ..       3      25 .. 0.68
   2 !    5.8   0.0    0.0082       9.3       5      39 ..      93     127 ..      75     136 .. 0.87
   3 !   10.4   0.0   0.00031      0.36      24      68 ..     158     201 ..     157     202 .. 0.95
   4 !   26.2   1.8   3.5e-09   3.9e-06       3      65 ..     213     274 ..     211     276 .. 0.94

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 2.1
    PF13414.1 35 nnaelyynlAlayl 48
                 + a  ++nlA a++
  MMETSP1325-20131115|10131_1  8 DAACTLANLANALW 21
                 44446788888876 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0082
    PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnael 39 
                   +  lG  l+ +gd+d++ + +  Al+   +++++
  MMETSP1325-20131115|10131_1  93 LWMKLGVGLYAKGDFDGSAATLLDALRRTAHDPVA 127
                  67889999999999999999999999987777765 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 0.00031
    PF13414.1  24 eayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleld 68 
                  +a++ Al+ +p+ +e+ + ++ + l+l  + ++Al  +++Alel+
  MMETSP1325-20131115|10131_1 158 QAFKLALDVCPELPEVRAEIGRSMLRLM-MVDDALVQLHRALELA 201
                  78999**********************9.99************96 PP

  == domain 4    score: 26.2 bits;  conditional E-value: 3.5e-09
    PF13414.1   3 AealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAl 65 
                  A +l + G a+  + ++d+Ai+a++ Al+l+p  a+  + l+ a+ ++g+   +Al+++ekA 
  MMETSP1325-20131115|10131_1 213 AAVLHAVGHAYAVNSELDKAIAAFRDALALEPLAASTRFLLSRALAENGE-TGAALTELEKAA 274
                  78899999*****************************************5.8*********96 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1   0.00025      0.28      20      64 ..      76     124 ..      74     125 .. 0.76
   2 ?    3.5   0.1     0.096   1.1e+02      19      62 ..     154     202 ..     147     205 .. 0.77
   3 ?    2.3   0.4      0.22   2.5e+02      13      46 ..     187     221 ..     186     224 .. 0.87
   4 !   31.0   4.3   2.2e-10   2.6e-07       3      59 ..     219     275 ..     217     279 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00025
    PF13432.1  20 leaalala....PeaaeallllaeallrlgrldeAaallraalalaPdd 64 
                  l++al+      P+  + ++ l++ l+++g++d++aa l  al+++  d
  MMETSP1325-20131115|10131_1  76 LRHALDVVpkdwPHQDQLWMKLGVGLYAKGDFDGSAATLLDALRRTAHD 124
                  6666666666668899********************6666666766555 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.096
    PF13432.1  19 al.eaalala....PeaaeallllaeallrlgrldeAa.allraalalaP 62 
                     e+a +la    Pe +e++ + +++ lrl  +d+A+ +l ra+ +la+
  MMETSP1325-20131115|10131_1 154 KVvEQAFKLAldvcPELPEVRAEIGRSMLRLMMVDDALvQLHRAL-ELAD 202
                  44488888888899***************9999999995555554.6655 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.22
    PF13432.1  13 ydeAlaaleaalala.Peaaeallllaeallrlgr 46 
                  +d+Al +l +al+la  ++ + + ++a +l++ g+
  MMETSP1325-20131115|10131_1 187 VDDALVQLHRALELAdEQHGRGWGGRAAVLHAVGH 221
                  689999**999999987799999999999988776 PP

  == domain 4    score: 31.0 bits;  conditional E-value: 2.2e-10
    PF13432.1   3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAa.allraala 59 
                   ++a+  + ++d+A+aa+++alal+P+aa  ++ll +al++ g+  +A+ +l +aa +
  MMETSP1325-20131115|10131_1 219 VGHAYAVNSELDKAIAAFRDALALEPLAASTRFLLSRALAENGETGAALtELEKAA-K 275
                  68999********************************************6665555.4 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.61   6.9e+02      15      41 ..      67      97 ..      63      99 .. 0.65
   2 !   14.5   0.1   3.3e-05     0.037       3      39 ..      93     129 ..      91     130 .. 0.93
   3 ?    0.4   0.0       1.1   1.3e+03      21      43 ..     157     179 ..     146     180 .. 0.80
   4 ?    6.3   0.3     0.014        16       1      33 [.     171     203 ..     171     215 .. 0.79
   5 !   17.2   1.3   4.5e-06    0.0052       2      43 ..     214     255 ..     212     256 .. 0.92
   6 !    8.9   0.4    0.0021       2.3       3      31 ..     249     277 ..     246     289 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.61
    PF13428.1 15 GdpdeAiallrrala....laPddaealllL 41
                 +++de  a+lr al     + P+++++++ L
  MMETSP1325-20131115|10131_1 67 ERLDEVCAVLRHALDvvpkDWPHQDQLWMKL 97
                 6788999999999983332444555566655 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 3.3e-05
    PF13428.1   3 allalarallalGdpdeAiallrralalaPddaeall 39 
                  ++++l+  l a Gd+d+ +a l +al++  +d+ a++
  MMETSP1325-20131115|10131_1  93 LWMKLGVGLYAKGDFDGSAATLLDALRRTAHDPVART 129
                  799******************************9996 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 1.1
    PF13428.1  21 iallrralalaPddaealllLar 43 
                  +++++ al  +P+ +e++ + +r
  MMETSP1325-20131115|10131_1 157 EQAFKLALDVCPELPEVRAEIGR 179
                  67888899999*99999987665 PP

  == domain 4    score: 6.3 bits;  conditional E-value: 0.014
    PF13428.1   1 peallalarallalGdpdeAiallrralalaPd 33 
                  pe++++ +r +l+l  +d+A+ +l ral+la +
  MMETSP1325-20131115|10131_1 171 PEVRAEIGRSMLRLMMVDDALVQLHRALELADE 203
                  67889999********************98644 PP

  == domain 5    score: 17.2 bits;  conditional E-value: 4.5e-06
    PF13428.1   2 eallalarallalGdpdeAiallrralalaPddaealllLar 43 
                  ++l a ++a++ + ++d+Aia++r+alal P  a  ++lL r
  MMETSP1325-20131115|10131_1 214 AVLHAVGHAYAVNSELDKAIAAFRDALALEPLAASTRFLLSR 255
                  5678999******************************99987 PP

  == domain 6    score: 8.9 bits;  conditional E-value: 0.0021
    PF13428.1   3 allalarallalGdpdeAiallrralala 31 
                  ++ +l ral+++G++ +A+  l++a++++
  MMETSP1325-20131115|10131_1 249 TRFLLSRALAENGETGAALTELEKAAKQG 277
                  67899********************9875 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       7.5   8.6e+03      16      33 ..      68      85 ..      65      86 .. 0.78
   2 !    8.6   0.0    0.0014       1.6       3      29 ..      93     119 ..      92     123 .. 0.90
   3 ?   -3.1   0.0       8.3   9.5e+03      22      32 ..     158     168 ..     157     169 .. 0.75
   4 ?    2.9   0.0     0.096   1.1e+02       6      31 ..     176     201 ..     171     203 .. 0.80
   5 !   17.4   0.3   2.2e-06    0.0025       1      32 [.     213     244 ..     213     246 .. 0.94
   6 ?    5.7   0.1     0.013        14       5      29 ..     251     275 ..     247     276 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 7.5
                 -HHHHHHHHHHHHHH-TT CS
   PF07719.12 16 dyeeAleafekAleldPn 33
                 +++e  + ++ Al   P+
  MMETSP1325-20131115|10131_1 68 RLDEVCAVLRHALDVVPK 85
                 677878889999998887 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0014
                  HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
   PF07719.12   3 alynlGlayyklgdyeeAleafekAle 29 
                  +++ lG  +y++gd++  ++ +  Al+
  MMETSP1325-20131115|10131_1  93 LWMKLGVGLYAKGDFDGSAATLLDALR 119
                  799*************99999988886 PP

  == domain 3    score: -3.1 bits;  conditional E-value: 8.3
                  HHHHHHHHH-T CS
   PF07719.12  22 eafekAleldP 32 
                  +af+ Al  +P
  MMETSP1325-20131115|10131_1 158 QAFKLALDVCP 168
                  57888988887 PP

  == domain 4    score: 2.9 bits;  conditional E-value: 0.096
                  HHHHHHHHTT-HHHHHHHHHHHHHH- CS
   PF07719.12   6 nlGlayyklgdyeeAleafekAleld 31 
                  ++G++ ++l   ++Al  + +Alel+
  MMETSP1325-20131115|10131_1 176 EIGRSMLRLMMVDDALVQLHRALELA 201
                  5677777777889***********97 PP

  == domain 5    score: 17.4 bits;  conditional E-value: 2.2e-06
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
   PF07719.12   1 aealynlGlayyklgdyeeAleafekAleldP 32 
                  a +l++ G ay+ + ++++A++af+ Al+l+P
  MMETSP1325-20131115|10131_1 213 AAVLHAVGHAYAVNSELDKAIAAFRDALALEP 244
                  67899*************************99 PP

  == domain 6    score: 5.7 bits;  conditional E-value: 0.013
                  HHHHHHHHHTT-HHHHHHHHHHHHH CS
   PF07719.12   5 ynlGlayyklgdyeeAleafekAle 29 
                  ++l +a++++g+   Al  +ekA +
  MMETSP1325-20131115|10131_1 251 FLLSRALAENGETGAALTELEKAAK 275
                  8899*******************87 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.31   3.5e+02      42      58 ..       6      22 ..       2      25 .. 0.78
   2 ?    1.6   0.0       0.2   2.3e+02      49      73 ..      94     118 ..      64     121 .. 0.55
   3 ?    2.1   0.0      0.14   1.6e+02       8      34 ..      94     120 ..      88     130 .. 0.74
   4 !   24.5   0.7   1.5e-08   1.7e-05      10      75 ..     176     242 ..     168     244 .. 0.92
   5 !   17.3   2.9   2.6e-06    0.0029       5      74 ..     213     275 ..     212     277 .. 0.95

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.31
    PF13424.1 42 hpdtaralnnlanlyla 58
                  pd a +l nlan+++a
  MMETSP1325-20131115|10131_1  6 EPDAACTLANLANALWA 22
                 57888899999998876 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.2
    PF13424.1  49 lnnlanlylalgdydeAleylekAl 73 
                  +  l+  ++a+gd+d + + l +Al
  MMETSP1325-20131115|10131_1  94 WMKLGVGLYAKGDFDGSAATLLDAL 118
                  4445555555555555555555555 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.14
    PF13424.1   8 lnnlalvlrrlgdydeAlelyekalel 34 
                  +  l+  l+++gd+d + + +  al  
  MMETSP1325-20131115|10131_1  94 WMKLGVGLYAKGDFDGSAATLLDALRR 120
                  567787888899999999998888865 PP

  == domain 4    score: 24.5 bits;  conditional E-value: 1.5e-08
    PF13424.1  10 nlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                  +++ + +rl + d+Al  + +alel  +++g+  + +a +l+  + +y+   ++d+A++ +++Al++
  MMETSP1325-20131115|10131_1 176 EIGRSMLRLMMVDDALVQLHRALELaDEQHGRGWGGRAAVLHAVGHAYAVNSELDKAIAAFRDALAL 242
                  7899999999***************888899*99*******************************98 PP

  == domain 5    score: 17.3 bits;  conditional E-value: 2.6e-06
    PF13424.1   5 atilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                  a++l+  ++++    ++d+A++ ++ al+l        p  a++ + l++++++ g+  +Al  lekA +
  MMETSP1325-20131115|10131_1 213 AAVLHAVGHAYAVNSELDKAIAAFRDALALE-------PLAASTRFLLSRALAENGETGAALTELEKAAK 275
                  889***************************6.......899**************************986 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.4   2.7e+03      13      28 ..     103     118 ..      93     119 .. 0.78
   2 ?    3.0   0.0      0.08        91       3      32 ..     173     202 ..     171     205 .. 0.88
   3 !   10.9   0.0   0.00025      0.28       2      32 ..     214     244 ..     213     246 .. 0.91
   4 !    7.1   0.0    0.0041       4.7       3      28 ..     249     274 ..     247     275 .. 0.91

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 2.4
                  HTT-HHHHHHHHH--- CS
    PF13181.1  13 qlGdydkAkeylekal 28 
                   +Gd+d + + l  al
  MMETSP1325-20131115|10131_1 103 AKGDFDGSAATLLDAL 118
                  6899999888776665 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.08
                  -TTT---HHHHTT-HHHHHHHHH---HHHH CS
    PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkp 32 
                  ++ ++G+ ++ l+  d A+  l +alel+ 
  MMETSP1325-20131115|10131_1 173 VRAEIGRSMLRLMMVDDALVQLHRALELAD 202
                  56789**********************986 PP

  == domain 3    score: 10.9 bits;  conditional E-value: 0.00025
                  --TTT---HHHHTT-HHHHHHHHH---HHHH CS
    PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelkp 32 
                  +++++ G++Y+ + + dkA+++++ al l p
  MMETSP1325-20131115|10131_1 214 AVLHAVGHAYAVNSELDKAIAAFRDALALEP 244
                  578889*********************9987 PP

  == domain 4    score: 7.1 bits;  conditional E-value: 0.0041
                  -TTT---HHHHTT-HHHHHHHHH--- CS
    PF13181.1   3 ayynlGdiYrqlGdydkAkeylekal 28 
                  ++++l+++++++G++ +A+  leka 
  MMETSP1325-20131115|10131_1 249 TRFLLSRALAENGETGAALTELEKAA 274
                  689*********************96 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.69   7.9e+02       7      23 ..       4      20 ..       1      32 [. 0.79
   2 ?    1.8   0.0      0.29   3.3e+02      13      30 ..      91     108 ..      77     112 .. 0.83
   3 ?    1.6   0.0      0.32   3.7e+02       2      30 ..     160     188 ..     159     191 .. 0.78
   4 ?    0.7   0.0      0.64   7.3e+02      13      34 .]     213     234 ..     209     234 .. 0.86
   5 !    9.9   0.0   0.00069      0.79       2      33 ..     236     267 ..     235     268 .. 0.93

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.69
    PF13431.1  7 eldPnnadaynnLAell 23
                 +++P+ a  + nLA++l
  MMETSP1325-20131115|10131_1  4 RREPDAACTLANLANAL 20
                 67888899999999987 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.29
    PF13431.1  13 adaynnLAelllnnGdle 30 
                   +++  L++ l+++Gd++
  MMETSP1325-20131115|10131_1  91 DQLWMKLGVGLYAKGDFD 108
                  678999**********98 PP

  == domain 3    score: 1.6 bits;  conditional E-value: 0.32
    PF13431.1   2 yekaleldPnnadaynnLAelllnnGdle 30 
                  ++ al+ +P+ ++++ + ++  l++   +
  MMETSP1325-20131115|10131_1 160 FKLALDVCPELPEVRAEIGRSMLRLMMVD 188
                  56699**********99998877665555 PP

  == domain 4    score: 0.7 bits;  conditional E-value: 0.64
    PF13431.1  13 adaynnLAelllnnGdleeAeq 34 
                  a ++++ + +++ n +l++A++
  MMETSP1325-20131115|10131_1 213 AAVLHAVGHAYAVNSELDKAIA 234
                  567888899**********985 PP

  == domain 5    score: 9.9 bits;  conditional E-value: 0.00069
    PF13431.1   2 yekaleldPnnadaynnLAelllnnGdleeAe 33 
                  ++ al+l+P  a  ++ L ++l++nG++  A+
  MMETSP1325-20131115|10131_1 236 FRDALALEPLAASTRFLLSRALAENGETGAAL 267
                  899************************99885 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2       1.9   2.2e+03       2      11 ..      11      20 ..      10      22 .. 0.80
   2 ?    1.2   0.0      0.24   2.7e+02       3      18 ..      93     108 ..      92     118 .. 0.90
   3 ?   -1.3   0.0       1.5   1.7e+03      22      33 ..     158     169 ..     157     170 .. 0.85
   4 ?    2.1   0.0      0.13   1.4e+02      16      31 ..     186     201 ..     182     203 .. 0.84
   5 !   16.4   0.1   3.9e-06    0.0044       7      32 ..     219     244 ..     213     244 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.9
                 HHHHHHHHHH CS
   PF00515.23  2 kalynlGnay 11
                  +l nl+na+
  MMETSP1325-20131115|10131_1 11 CTLANLANAL 20
                 6789****97 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.24
                  HHHHHHHHHHHTT-HH CS
   PF00515.23   3 alynlGnaylklgkyd 18 
                   +  lG+ ++ +g++d
  MMETSP1325-20131115|10131_1  93 LWMKLGVGLYAKGDFD 108
                  6999***********8 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 1.5
                  HHHHHHHHHHTT CS
   PF00515.23  22 eyyekALelnPn 33 
                  ++++ AL + P+
  MMETSP1325-20131115|10131_1 158 QAFKLALDVCPE 169
                  79999**99996 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.13
                  -HHHHHHHHHHHHHHH CS
   PF00515.23  16 kydeAleyyekALeln 31 
                  + d+Al    +ALel 
  MMETSP1325-20131115|10131_1 186 MVDDALVQLHRALELA 201
                  5699**********96 PP

  == domain 5    score: 16.4 bits;  conditional E-value: 3.9e-06
                  HHHHHHHTT-HHHHHHHHHHHHHHHT CS
   PF00515.23   7 lGnaylklgkydeAleyyekALelnP 32 
                   G+ay  + ++d+A+++++ AL l+P
  MMETSP1325-20131115|10131_1 219 VGHAYAVNSELDKAIAAFRDALALEP 244
                  69**********************98 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   0.00011      0.13       6      84 .]     188     273 ..     183     273 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00011
                  HHHHHHHHHHCCC-ST...-H...HHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHHH CS
    PF12895.2   6 knAlflaekllaespk...dp...edaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLeka 84 
                  ++Al  + ++l+++++   +     +a+l+a + ++  n e ++A+ ++r+ l l++  + +r+ll r+l + g+   A++ Leka
  MMETSP1325-20131115|10131_1 188 DDALVQLHRALELADEqhgRGwggRAAVLHAVGHAYAVNSELDKAIAAFRDaLALEPLAASTRFLLSRALAENGETGAALTELEKA 273
                  6677777777777776554113446889*********************99*8888888899*****************9999985 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2      0.33   3.7e+02       4      13 ..      13      22 ..       7      23 .. 0.89
   2 ?    0.3   0.0         1   1.2e+03       7      24 ..      97     114 ..      94     115 .. 0.86
   3 ?   -1.0   1.1       2.8   3.2e+03       4      16 ..     209     221 ..     206     222 .. 0.80
   4 ?   10.8   0.1   0.00043      0.49       2      25 ..     248     271 ..     247     272 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.33
                 H---HHHHHH CS
    PF07721.9  4 llaLAralla 13
                 l++LA al+a
  MMETSP1325-20131115|10131_1 13 LANLANALWA 22
                 789*****98 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 1
                  -HHHHHH-------HHHH CS
    PF07721.9   7 LArallalGdldeArall 24 
                  L+  l+a Gd+d  +a+l
  MMETSP1325-20131115|10131_1  97 LGVGLYAKGDFDGSAATL 114
                  77889999****999887 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 2.8
                  H---HHHHHH--- CS
    PF07721.9   4 llaLArallalGd 16 
                    ++A +l+a G+
  MMETSP1325-20131115|10131_1 209 WGGRAAVLHAVGH 221
                  5689******996 PP

  == domain 4    score: 10.8 bits;  conditional E-value: 0.00043
                  HHH---HHHHHH-------HHHHH CS
    PF07721.9   2 rallaLArallalGdldeAralle 25 
                   ++++L ral++ G+  +A++ le
  MMETSP1325-20131115|10131_1 248 STRFLLSRALAENGETGAALTELE 271
                  6899*****************998 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.55   6.3e+02       4      26 ..      95     117 ..      92     121 .. 0.71
   2 ?   -0.8   0.0       2.2   2.5e+03       6      27 ..     177     198 ..     173     203 .. 0.72
   3 ?    3.2   0.0      0.12   1.3e+02       9      28 ..     222     241 ..     214     244 .. 0.77
   4 ?    2.1   0.1      0.26   2.9e+02       4      28 ..     251     275 ..     249     276 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.55
                  HHHHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1   4 yklalsyyklgdtdeAlealerl 26 
                   kl+  +y+ gd+d + ++l + 
  MMETSP1325-20131115|10131_1  95 MKLGVGLYAKGDFDGSAATLLDA 117
                  57888889888***777766444 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 2.2
                  HHHHHHH.HHHHHHHHHHHHHHH CS
    PF13174.1   6 lalsyyk.lgdtdeAlealerli 27 
                  +++s+++ + + d+Al  l r +
  MMETSP1325-20131115|10131_1 177 IGRSMLRlM-MVDDALVQLHRAL 198
                  688888877.7777776665554 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.12
                  HHHHHHHHHHHHHHHHHHHH CS
    PF13174.1   9 syyklgdtdeAlealerlik 28 
                  +y  + + d+A++a+++ ++
  MMETSP1325-20131115|10131_1 222 AYAVNSELDKAIAAFRDALA 241
                  56656689********9886 PP

  == domain 4    score: 2.1 bits;  conditional E-value: 0.26
                  HHHHHHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1   4 yklalsyyklgdtdeAlealerlik 28 
                  ++l +++ ++g+t +Al+ le+  k
  MMETSP1325-20131115|10131_1 251 FLLSRALAENGETGAALTELEKAAK 275
                  77889999999**********9877 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.31   3.6e+02      26      66 ..      88     128 ..      60     130 .. 0.77
   2 ?   -2.0   0.1       2.7   3.1e+03      32      56 ..     174     198 ..     158     207 .. 0.47
   3 ?    9.1   0.5   0.00088         1       4      58 ..     222     276 ..     220     305 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.31
    PF13371.1  26 PddpyerRDrGlllaqlgclaaAaedLeaflelcpdapdae 66 
                  P++ +++   G  l+  g++ + a+ L  +l +  ++p a+
  MMETSP1325-20131115|10131_1  88 PHQDQLWMKLGVGLYAKGDFDGSAATLLDALRRTAHDPVAR 128
                  77888999999999999999999999999997777777665 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 2.7
    PF13371.1  32 rRDrGlllaqlgclaaAaedLeafl 56 
                  r + G    +l  +  A+  L ++l
  MMETSP1325-20131115|10131_1 174 RAEIGRSMLRLMMVDDALVQLHRAL 198
                  3333333333333444444444444 PP

  == domain 3    score: 9.1 bits;  conditional E-value: 0.00088
    PF13371.1   4 iylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflel 58 
                  +y+ + + ++A+a+    l+l P +++ r     +la+ g+  aA+++Le ++++
  MMETSP1325-20131115|10131_1 222 AYAVNSELDKAIAAFRDALALEPLAASTRFLLSRALAENGETGAALTELEKAAKQ 276
                  7899999*******************************************99866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.68u 0.35s 00:00:01.03 Elapsed: 00:00:00.63
# Mc/sec: 1312.29
//
Query:       MMETSP1325-20131115|10135_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|10137_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.63
# Mc/sec: 182.58
//
Query:       MMETSP1325-20131115|10137_2  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 338.80
//
Query:       MMETSP1325-20131115|10140_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|10141_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00033   20.6   0.0    0.00049   20.1   0.0    1.2  1  PF03556.10 Cullin binding


Domain annotation for each model (and alignments):
>> PF03556.10  Cullin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   3.6e-08   0.00049       2      47 ..      52      96 ..      50      97 .] 0.83

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 3.6e-08
   PF03556.10  2 eklkkkleeleeelksdeekfkklYeftFkfakeeeqksldletai 47
                 ++l+++l++++  +  +++ f+++Y+f+F+f++e +q++++ e  i
  MMETSP1325-20131115|10141_1 52 KELQAALPSFDPGFM-EHKDFRDFYRFCFQFNREGTQRTIEKEAII 96
                 566777777777776.7899********************999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|10142_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.017   14.4   0.5      0.035   13.4   0.3    1.6  1  PF05186.8 Dpy-30 motif


Domain annotation for each model (and alignments):
>> PF05186.8  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3   2.5e-06     0.035      21      37 ..      78      94 ..      64      95 .] 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.5e-06
    PF05186.8 21 lakeRPeDPiefLaeyL 37
                  a +RP++P +++a yL
  MMETSP1325-20131115|10142_1 78 AAPVRPANPASYIAPYL 94
                 4889************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       530  (0.0387654); expected 273.4 (0.02)
Passed bias filter:                      422  (0.030866); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 455.31
//
Query:       MMETSP1325-20131115|10147_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.6    8.8   6.8        2.9    8.6   4.7    1.1  1  PF08015.6 Fungal mating-type pheromone


Domain annotation for each model (and alignments):
>> PF08015.6  Fungal mating-type pheromone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   4.7   0.00021       2.9      11      45 ..      24      57 ..       8      60 .] 0.70

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00021
    PF08015.6 11 asssssaessesalfasssspspspalsssasasd 45
                 ++sss+a+s +++++++ss+p   +a++ssa+as 
  MMETSP1325-20131115|10147_1 24 SGSSSAASSKPASSSVASSKPA-LSAPASSAPASS 57
                 5678888888999999999998.557777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|10145_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19    9.8   3.2       0.21    9.6   2.2    1.1  1  PF09726.4 Transmembrane protein


Domain annotation for each model (and alignments):
>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.2   1.6e-05      0.21     314     435 ..      16     132 ..       1     140 [. 0.51

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 1.6e-05
    PF09726.4 314 lagsaeelalkkdsnsssaeeksakskssksaktskrsksnsspkshksaagsvssssvkkneskdkkasksssgaldskkvisglsandtvkekkaeaklskpdalerLeadikkLkaeLs 435
                   ++sa+++ +k+d +   +++++        ++    +++  +pk+ ++ a+ ++ +     ++ ++  ++ ++ a+ ++  +s  ++++   ++++ +++s+++ l rLe++i++L+ e +
  MMETSP1325-20131115|10145_1  16 KSSSARSIRAKRDAQRIEEAQENVA---ALWER--PLTSALGNPKQRNEGAAKRERTRRGGGNDASGGRPTRPGAAQRNRSELSVRADDQPHMAQTKSERISSGKMLFRLEGEIERLREEGD 132
                  3333344444443211111111111...11111..11222233333333333333333322233444444445667777777777777777777888889******************9855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.44s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 841.39
//
Query:       MMETSP1325-20131115|10144_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-29  102.0   0.0    3.7e-29  101.5   0.0    1.1  1  PF10021.4 Uncharacterized protein conserved in bacteria (DUF2263)
  ------ inclusion threshold ------
      0.063   12.4   0.0       0.28   10.2   0.0    1.8  2  PF05028.9 Poly (ADP-ribose) glycohydrolase (PARG)


Domain annotation for each model (and alignments):
>> PF10021.4  Uncharacterized protein conserved in bacteria (DUF2263)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.5   0.0   5.4e-33   3.7e-29      19     147 ..      23     164 ..      12     165 .. 0.86

  Alignments for each domain:
  == domain 1    score: 101.5 bits;  conditional E-value: 5.4e-33
    PF10021.4  19 kkidikeqleaaveltelyspekl.......sleekessqrteveVveedtleaaqrlaesedakkvavLNfAsaknpGGgflrGaqAqEEsLarrSsLyasltke...eefYea...nrkeks..rlYtdkqiYSPdVlvfrd 147
                    +d+++ql+a+ve+++ y p+++       ++++k+++ +t++e  e+ tl+aa+rl     + +v++LNfAsaknpGGgfl+Ga+AqEE+Lar   Lya++t +   ++ Y+a   +rk ks   lY d +iYSP+V+v+r+
  MMETSP1325-20131115|10144_1  23 AFVDVSAQLQACVEGSTFYEPSSKhheriprVNSRKKQTLHTAIEMDEGGTLAAAERLCL--RGLNVVALNFASAKNPGGGFLGGAEAQEEHLARNTLLYAAITAPgscAQHYAApgkKRKTKStgALYDDSMIYSPSVPVIRT 164
                  348999****************999999998888999999******************87..9*****************************************987667778763323433333369**************97 PP

>> PF05028.9  Poly (ADP-ribose) glycohydrolase (PARG)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0     0.049   3.4e+02     159     183 ..      86     111 ..      36     113 .. 0.81
   2 ?   10.2   0.0   4.1e-05      0.28     291     309 ..     220     238 ..     136     254 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.049
    PF05028.9 159 ealqvDFAn.kylGGGvLssGcvQEE 183
                  +++ ++FA  k  GGG L+    QEE
  MMETSP1325-20131115|10144_1  86 NVVALNFASaKNPGGGFLGGAEAQEE 111
                  5667889864789************9 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 4.1e-05
    PF05028.9 291 kgvatgnwgCgafgGdkeL 309
                   +++ g wgCg+f+ d+ +
  MMETSP1325-20131115|10144_1 220 DAIVLGAWGCGVFRNDPAM 238
                  379*************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.43s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1407.86
//
Query:       MMETSP1325-20131115|10143_1  [L=703]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00038   19.8   1.7     0.0054   16.1   0.1    4.9  4  PF07699.8 GCC2 and GCC3
  ------ inclusion threshold ------
      0.012   14.6   2.9       0.19   10.8   0.1    2.5  2  PF10589.4 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.3   2.7    0.0081        55       1      37 [.     115     151 ..     113     158 .. 0.67
   2 !   16.1   0.1   7.9e-07    0.0054      12      42 ..     169     208 ..     166     211 .. 0.84
   3 !   11.7   0.1   1.9e-05      0.13       9      28 ..     192     211 ..     187     234 .. 0.60
   4 !    3.9   0.1    0.0052        36       9      18 ..     282     291 ..     276     293 .. 0.83

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.0081
    PF07699.8   1 GtylkkgnkkCepCprGtYkneegqk..kCiaCppgttT 37 
                  G+y +     C + p G+Y+ne      + i+Cp gt+ 
  MMETSP1325-20131115|10143_1 115 GYYWNG--VACVLTPPGYYQNEPDTPevEPISCPGGTYC 151
                  566633..3599999999996655444488888888764 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 7.9e-07
    PF07699.8  12 epCprGtY.........kneegqkkCiaCppgttTskkgs 42 
                  +pCp +tY           e g ++C++Cp+g  T ++gs
  MMETSP1325-20131115|10143_1 169 QPCPMHTYaetprdtggGIEPGAVECTPCPDGFRTMEEGS 208
                  69******7777655554777888************9998 PP

  == domain 3    score: 11.7 bits;  conditional E-value: 1.9e-05
    PF07699.8   9 kkCepCprGtYkneegqkkC 28 
                   +C+pCp G+   eeg+ +C
  MMETSP1325-20131115|10143_1 192 VECTPCPDGFRTMEEGSLEC 211
                  45666666666666666666 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.0052
    PF07699.8   9 kkCepCprGt 18 
                  +kC pC +Gt
  MMETSP1325-20131115|10143_1 282 NKCVPCRKGT 291
                  6999999998 PP

>> PF10589.4  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.3    0.0054        37      19      31 ..     194     206 ..     193     207 .. 0.87
   2 ?   10.8   0.1   2.7e-05      0.19      18      33 ..     283     297 ..     282     307 .. 0.74

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.0054
                  -HHHH-----HHH CS
    PF10589.4  19 CtPCRiGttrlve 31 
                  CtPC  G + + e
  MMETSP1325-20131115|10143_1 194 CTPCPDGFRTMEE 206
                  *******998876 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 2.7e-05
                  --HHHH-----HHHHH CS
    PF10589.4  18 kCtPCRiGttrlvell 33 
                  kC+PCR Gt  +ve +
  MMETSP1325-20131115|10143_1 283 KCVPCRKGT-DGVERV 297
                  9*******9.455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (703 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       637  (0.0465916); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.03u 0.44s 00:00:01.47 Elapsed: 00:00:00.55
# Mc/sec: 3062.98
//
Query:       MMETSP1325-20131115|10150_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.1    6.4   7.9        2.4    6.2   5.5    1.2  1  PF08580.5 Yeast cortical protein KAR9


Domain annotation for each model (and alignments):
>> PF08580.5  Yeast cortical protein KAR9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.5   0.00018       2.4     521     631 ..     110     227 ..      19     236 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.00018
    PF08580.5 521 skpvtpskaaieskspasstrygsqigpqspkklklsassvppvspreslitestversasrass.eslsagslsgkl.....vspppkstl...svsrkkiagaslikSvesieeerlk 631
                  + p+t s+ a  s+  as+t ++  + ++  +++ +s++ v++v+p  + +t+ t er+a++a   ++ + g+ +  +     v+ ++  t    ++s ++i+g s++   + + + +lk
  MMETSP1325-20131115|10150_1 110 ASPTTASPTA--SPTAASPTASPTAASSTAASSTAASPTAVAAVAPTPTTVTTVTDERDAEEATVvTEEKEGKQEDVVvsasvVAETGSKTEekaDISADEIKGSSMVQTPNTMSKSSLK 227
                  3679999999..9999***********9**********************************9997777777666666555553343333336668888888888887776666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1089  (0.0796518); expected 273.4 (0.02)
Passed bias filter:                      468  (0.0342305); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.62
# Mc/sec: 977.87
//
Query:       MMETSP1325-20131115|10152_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|10154_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-08   31.6   0.1    4.5e-05   22.3   0.0    2.5  2  PF00036.27 EF hand
      3e-07   29.6   0.0     0.0011   18.5   0.0    2.4  2  PF13405.1  EF-hand domain
      7e-07   29.1   0.2    2.2e-06   27.5   0.1    1.8  2  PF13499.1  EF-hand domain pair
    1.2e-06   27.8   0.2    0.00033   20.0   0.0    2.0  2  PF13833.1  EF-hand domain pair
    6.8e-05   21.9   0.0    0.00016   20.7   0.0    1.6  1  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.6e-08   4.5e-05       2      29 .]      34      61 ..      33      61 .. 0.95
   2 !    7.1   0.0    0.0012       3.2       5      28 ..      73      96 ..      69      97 .. 0.86

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 1.6e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHHHHH CS
   PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkkl 29
                 l+++F+ +D D dG +s  E+ e+++kl
  MMETSP1325-20131115|10154_1 34 LRDIFSNVDLDSDGELSSAELYECMTKL 61
                 89***********************986 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0012
                 HHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27  5 aFkefDkDgdGkIsfeEfkealkk 28
                 + + +D++ + +I+  E+ e l++
  MMETSP1325-20131115|10154_1 73 LVRYLDRNASDTINIVELEEGLRE 96
                 56889**************99986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   4.1e-07    0.0011       1      28 [.      33      60 ..      33      67 .. 0.92
   2 !    8.9   0.0   0.00051       1.4       5      27 ..      73      95 ..      69     103 .. 0.87

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 4.1e-07
                 HHH---GCC-------B---HHHHHHH. CS
    PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrk 28
                 +lr++F   D d dG+++ +EL  +++k
  MMETSP1325-20131115|10154_1 33 KLRDIFSNVDLDSDGELSSAELYECMTK 60
                 59**********************9984 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00051
                 --GCC-------B---HHHHHHH CS
    PF13405.1  5 aFklfDkdgdGkidaeELrdaLr 27
                 + + +D++ + +i++ EL   Lr
  MMETSP1325-20131115|10154_1 73 LVRYLDRNASDTINIVELEEGLR 95
                 6689***************9998 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.1   8.1e-10   2.2e-06       1      64 [.      33      92 ..      33      94 .. 0.93
   2 !    7.0   0.0    0.0021       5.7       5      30 ..      73      98 ..      68     114 .. 0.82

  Alignments for each domain:
  == domain 1    score: 27.5 bits;  conditional E-value: 8.1e-10
    PF13499.1  1 klkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflq 64
                 kl+++F+  D d dg l+ +eL + +++l+ ++++e+  ++    +++lD n + +++  E+++
  MMETSP1325-20131115|10154_1 33 KLRDIFSNVDLDSDGELSSAELYECMTKLQLPITEEDALRL----VRYLDRNASDTINIVELEE 92
                 699***************************99998888888....************9999876 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0021
    PF13499.1  5 aFkllDkdgdgyldkeeLlrllkhlg 30
                 + + lD++ +++++  eL++ l+   
  MMETSP1325-20131115|10154_1 73 LVRYLDRNASDTINIVELEEGLREYK 98
                 56789**************9998765 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   3.5e-05     0.095      26      53 ..      33      60 ..      27      61 .. 0.91
   2 !   20.0   0.0   1.2e-07   0.00033       1      43 [.      45      86 ..      45      95 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.5e-05
    PF13833.1 26 evdilfrefDtdgdGkisfeEFcvller 53
                 +++++f+ +D+d dG +s +E ++++++
  MMETSP1325-20131115|10154_1 33 KLRDIFSNVDLDSDGELSSAELYECMTK 60
                 5799**********************86 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 1.2e-07
    PF13833.1  1 ekGlItreeLkralallglkglseeevdilfrefDtdgdGkis 43
                 ++G+++ +eL++++++l l+ ++ee++  l+r +D++ +  i+
  MMETSP1325-20131115|10154_1 45 SDGELSSAELYECMTKLQLP-ITEEDALRLVRYLDRNASDTIN 86
                 58************888888.*****************99998 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   5.8e-08   0.00016       1      24 [.      34      57 ..      34      58 .. 0.93

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 5.8e-08
                 HHHHHHHH--S----B-HHHHHHH CS
    PF13202.1  1 lkdtFrafDlNgDGkIsreELkrl 24
                 l+d+F+ +Dl+ DG +s  EL++ 
  MMETSP1325-20131115|10154_1 34 LRDIFSNVDLDSDGELSSAELYEC 57
                 799******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|10156_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0016   16.6   1.4     0.0017   16.6   0.9    1.0  1  PF05911.6 Plant protein of unknown function (DUF869)
  ------ inclusion threshold ------
      0.073   12.3   0.5      0.073   12.3   0.4    1.1  1  PF05278.7 Arabidopsis phospholipase-like protein (PEARLI 4)
      0.089   12.3   0.6       0.11   12.0   0.4    1.1  1  PF05064.8 Nsp1-like C-terminal region
        0.1   12.2   0.9        0.1   12.2   0.6    1.0  1  PF07889.7 Protein of unknown function (DUF1664)
       0.22   10.9   3.8       0.22   10.9   2.6    1.0  1  PF08597.5 Translation initiation factor eIF3 subunit
       0.23   10.6   5.0       0.26   10.5   3.5    1.0  1  PF11180.3 Protein of unknown function (DUF2968)


Domain annotation for each model (and alignments):
>> PF05911.6  Plant protein of unknown function (DUF869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.9   7.3e-07    0.0017     576     639 ..       4      67 ..       1      68 [] 0.92

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 7.3e-07
    PF05911.6 576 seveissldevktaeekstleeletlklekeklevelskckedleesklklketekkleelkse 639
                  +e e +   ++  +e +  +e++e++k+e++ +++ l+ ++++ e+ kl+l + e  l+ lk+ 
  MMETSP1325-20131115|10156_1   4 AESELKAARKTAASEAIVLHEQVEMAKAETRRVQDDLTLAQANHETLKLELANRESDLNGLKAA 67 
                  677888888999999*********************************************9976 PP

>> PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   3.2e-05     0.073     180     227 ..      18      65 ..       6      68 .] 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.2e-05
    PF05278.7 180 eavkyydeqetavvEKevkerdvllkkqEmekqekelaekEKeikevr 227
                  ea+  +++ e+a+ E ++ + d++l++ + e+ + ela++E +++ ++
  MMETSP1325-20131115|10156_1  18 EAIVLHEQVEMAKAETRRVQDDLTLAQANHETLKLELANRESDLNGLK 65 
                  6777899**********************************9987776 PP

>> PF05064.8  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.4   4.9e-05      0.11      62     105 ..      21      64 ..      14      67 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.9e-05
    PF05064.8  62 kLysevvkaeqeqnkldqeLdfvesqqdeLeslLdryEeeieel 105
                   L+++v+ a++e++++ + L++ +++++ L+  L + E++++ l
  MMETSP1325-20131115|10156_1  21 VLHEQVEMAKAETRRVQDDLTLAQANHETLKLELANRESDLNGL 64 
                  59*********************************999998765 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.6   4.5e-05       0.1      56     116 ..       5      65 ..       1      68 [] 0.89

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.5e-05
    PF07889.7  56 seavasakkhLsqridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLe 116
                  ++++++a+k  +++   l ++++  k+ ++++++++t ++ + +++k ++ + ++ ++gL+
  MMETSP1325-20131115|10156_1   5 ESELKAARKTAASEAIVLHEQVEMAKAETRRVQDDLTLAQANHETLKLELANRESDLNGLK 65 
                  457999*****************************************99998888777776 PP

>> PF08597.5  Translation initiation factor eIF3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.6   9.8e-05      0.22      50     111 ..       4      63 ..       1      68 [] 0.82

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 9.8e-05
    PF08597.5  50 akkaakakakkelkakieekekakkekkekekekkeeeldeedeaaekerlrkleeesDLkn 111
                  a+++ ka++k++++++i   e+ + +k+e ++   +++l+  + + e ++l+ ++ esDL+ 
  MMETSP1325-20131115|10156_1   4 AESELKAARKTAASEAIVLHEQVEMAKAETRRV--QDDLTLAQANHETLKLELANRESDLNG 63 
                  567888899999999988887777777666555..789**********************95 PP

>> PF11180.3  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.5   0.00011      0.26     100     160 ..       3      65 ..       1      67 [. 0.81

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00011
    PF11180.3 100 Ladveirraqleaqka..qlerliaasearaerLqadlelareQeaqvaarqkqarkeaaaLe 160
                   a+ e++ a+  a  +   l +++++++a+ +r q dl la++ +++++ + ++  ++++ L+
  MMETSP1325-20131115|10156_1   3 VAESELKAARKTAASEaiVLHEQVEMAKAETRRVQDDLTLAQANHETLKLELANRESDLNGLK 65 
                  5788888887766555125799***********************999999999888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       592  (0.0433002); expected 273.4 (0.02)
Passed bias filter:                      450  (0.032914); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|10157_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   14.2   0.0      0.028   13.8   0.0    1.3  1  PF09549.5  Bpu10I restriction endonuclease
       0.04   12.6   0.0      0.047   12.4   0.0    1.1  1  PF09571.5  XcyI restriction endonuclease
        0.1   12.1   0.0        1.6    8.3   0.0    2.0  2  PF00292.13 'Paired box' domain


Domain annotation for each model (and alignments):
>> PF09549.5  Bpu10I restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   6.1e-06     0.028     107     151 ..       8      52 ..       6      92 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 6.1e-06
    PF09549.5 107 qeaaataedlKeavPgalYfvvaEyldltpasnesteiDevyilr 151
                  qe+ +t ++lK+++Pg   ++v++   + ++  +  ++D+ y + 
  MMETSP1325-20131115|10157_1   8 QEVMQTMSELKTKNPGVWTILVTDNTGMIDQPDQHPQVDQFYHIA 52 
                  8999************************************99665 PP

>> PF09571.5  XcyI restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     1e-05     0.047     266     307 ..      24      65 ..      12      71 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1e-05
    PF09571.5 266 cwtvvnvsnidlvkarkesPttdkfyslsllkdkataeyadf 307
                  +wt++ + n  ++    + P  d+fy++++ + k+ +  a f
  MMETSP1325-20131115|10157_1  24 VWTILVTDNTGMIDQPDQHPQVDQFYHIATPSVKSWQPRAKF 65 
                  8****************************9999987776666 PP

>> PF00292.13  'Paired box' domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.025   1.2e+02      79     100 ..       9      30 ..       4      38 .. 0.83
   2 ?    8.3   0.0   0.00035       1.6      77     116 ..      38      78 ..      29      85 .. 0.80

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.025
   PF00292.13  79 evvkkieeykrenpsifaweir 100
                  ev + ++e+k +np++++  + 
  MMETSP1325-20131115|10157_1   9 EVMQTMSELKTKNPGVWTILVT 30 
                  799999*********9876555 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00035
   PF00292.13  77 tpevvkkiee.ykrenpsifaweirdkllkegvcdkdnvps 116
                   p+   ++++ y+  +ps+ +w+ r+k+l+ ++ d+ n  s
  MMETSP1325-20131115|10157_1  38 QPDQHPQVDQfYHIATPSVKSWQPRAKFLARTLFDDINFKS 78 
                  6777777777356789****************999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 437.80
//
Query:       MMETSP1325-20131115|10153_1  [L=376]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   14.6   0.1      0.017   13.9   0.1    1.3  1  PF07586.6 Protein of unknown function (DUF1552)


Domain annotation for each model (and alignments):
>> PF07586.6  Protein of unknown function (DUF1552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   1.2e-06     0.017     158     202 ..     279     323 ..     223     335 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.2e-06
    PF07586.6 158 errrsvLdavledakslrrklgkedrakLdeYltsvrelekrlek 202
                    +++vLd vl+ a++l   l+ ++r +L++Y   v el++r ++
  MMETSP1325-20131115|10153_1 279 SLDENVLDVVLGFANRLATPLTPAERLQLEAYRVFVNELRERHHQ 323
                  56899**********************************998744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 1802.06
//
Query:       MMETSP1325-20131115|10158_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 316.66
//
Query:       MMETSP1325-20131115|10155_1  [L=378]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-24   85.2   0.1      9e-24   84.3   0.0    1.5  1  PF00160.16 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
    1.9e-16   59.3   0.1    3.4e-16   58.5   0.1    1.4  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    4.7e-13   48.8   0.0    8.1e-13   48.0   0.0    1.4  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    1.5e-11   43.8   0.0    2.8e-11   42.9   0.0    1.4  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00160.16  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   0.0   2.6e-27     9e-24      44     154 ..       3     121 ..       1     122 [. 0.81

  Alignments for each domain:
  == domain 1    score: 84.3 bits;  conditional E-value: 2.6e-27
   PF00160.16  44 rvikgfmiqgGdpsgkga.....ngeekkaggesipdEikkkklkhkrGalamartgpepnsngsqFfItlgdap..hlDgkytvFGkVvegmdvvekieavetde..kpeknvkiksvg 154
                   v ++ ++q+Gdp+g+g      +g    ++ ++++dEi +  +++++G+l ma++g ++n+ngsqFf+tl+  +  hlD ++t+FG+V egm+v++ ++++ td+  +p +++++ +++
  MMETSP1325-20131115|10155_1   3 NVQQNLLAQTGDPTGTGKggtsvYGIMYGEQAKYFEDEIVQTVKHNRKGLLCMANEG-AENTNGSQFFFTLRGDDleHLDPHHTIFGEVAEGMEVLDLLNKEFTDGdgRPFRDIRVLHTH 121
                  688999*********9887765533323334447*****655555588*******97.69***********987788****99*****************96666667****99998775 PP

>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.1     1e-19   3.4e-16       1      70 []     205     275 ..     205     275 .. 0.98

  Alignments for each domain:
  == domain 1    score: 58.5 bits;  conditional E-value: 1e-19
                  EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBEE CS
   PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseedaekAlealngkklggrelk 70 
                  lfV  L+p + +e+L+ +Fs fG+i ++++++d  tg s ++af++Fes e+ ++A ++++g  +++r++k
  MMETSP1325-20131115|10155_1 205 LFVVKLNPVTRDEDLELIFSRFGKILECEIIKDaITGDSLNYAFITFESTEACNEAYKKMDGVLIDDRRIK 275
                  7999****************************************************************996 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   2.4e-16   8.1e-13       1      69 []     205     275 ..     205     275 .. 0.96

  Alignments for each domain:
  == domain 1    score: 48.0 bits;  conditional E-value: 2.4e-16
    PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkalkkln.lvlkgrtir 69 
                  l+v +l+p + +edl  +fs++gk+ +++i+++   g + ++Af++fes e++ +a+kk++ + ++ r i+
  MMETSP1325-20131115|10155_1 205 LFVVKLNPVTRDEDLELIFSRFGKILECEIIKDAItGDSLNYAFITFESTEACNEAYKKMDgVLIDDRRIK 275
                  67889*****************************99************************99******996 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   8.2e-15   2.8e-11       4      56 .]     222     279 ..     221     279 .. 0.96

  Alignments for each domain:
  == domain 1    score: 42.9 bits;  conditional E-value: 8.2e-15
    PF13893.1   4 lfskfGkverikifrkk.....ggqAfvefdtveaArkakeylngvklygktLkveys 56 
                  +fs+fGk+ ++ i ++       ++Af++f+++ea + a+++++gv+++++++kv++s
  MMETSP1325-20131115|10155_1 222 IFSRFGKILECEIIKDAitgdsLNYAFITFESTEACNEAYKKMDGVLIDDRRIKVDFS 279
                  8******************8855*********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.32s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 1776.12
//
Query:       MMETSP1325-20131115|10162_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 275.14
//
Query:       MMETSP1325-20131115|10163_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0036   16.9   0.0     0.0048   16.5   0.0    1.2  1  PF01217.15 Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> PF01217.15  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.5e-07    0.0048       1     103 [.       1     102 [.       1     106 [] 0.89

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 3.5e-07
                  -EEEEEEE-----EEEEEESS---HHHHHHHHHHHHHHHHTS-SSS-SEEEETTEEEEEEEETTEEEEEEE-----HHHHHHHHHHHHHHHHHH-----HHHH CS
   PF01217.15   1 mikaililnkkgkvrlakfytavddkkkqklieevyelvsaRdsklsniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdkyfgnVceldl 103
                  mi+ i+++++ g+v+++k++  +      +++ +  +  +a+ ++   i+ ++   +i     +++ +  v+ +   l+++e +h+ ++   +yfg+V+e ++
  MMETSP1325-20131115|10163_1   1 MIQSIFMMSRTGEVLIEKHWRGITPRSVCDVFWDEANRYAAK-EDAPPIIFTSKYYLISVFRDDIFLIASVTAEVPPLLVIEFLHRIIDIYTEYFGSVEEQNI 102
                  899*****************9999999999999999988888.677888888887777777778899999999999************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 529.20
//
Query:       MMETSP1325-20131115|10164_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 596.43
//
Query:       MMETSP1325-20131115|10165_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|10167_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.7    8.1  12.3        3.8    7.7   8.5    1.4  1  PF12446.3 Protein of unknown function (DUF3682)


Domain annotation for each model (and alignments):
>> PF12446.3  Protein of unknown function (DUF3682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   8.5   0.00028       3.8      48     105 ..       9      70 .]       1      70 [] 0.68

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00028
    PF12446.3  48 eAgssgsnssnttGdsstgdqsp.aAaaannsspp..egpag.ttsgtghtrqeeeeeeeen 105
                   A ss ++  +  G+  t d  p  +  + ++ p   e  +g  t g +h+++eeeeeeee+
  MMETSP1325-20131115|10167_1   9 PAVSSITTTPDGLGEVYTHDNPPdLSQHTSETHPYhrESEEGvVTEGQQHKGEEEEEEEEEE 70 
                  5889999999999*****99998444455555554213333336999999999999766664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       433  (0.0316706); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 304.99
//
Query:       MMETSP1325-20131115|10168_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       448  (0.0327677); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 1158.24
//
Query:       MMETSP1325-20131115|10170_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 608.31
//
Query:       MMETSP1325-20131115|10171_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-22   79.3   0.0    2.7e-22   79.1   0.0    1.0  1  PF07059.7 Protein of unknown function (DUF1336)


Domain annotation for each model (and alignments):
>> PF07059.7  Protein of unknown function (DUF1336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.0     2e-26   2.7e-22      21     224 ..       2     221 ..       1     224 [. 0.83

  Alignments for each domain:
  == domain 1    score: 79.1 bits;  conditional E-value: 2e-26
    PF07059.7  21 kKvpaeapllkligvdlfksskk......ldeiakqlelev..qkaakkkvpfvlvvnlqvPdyaaavffekd.gegyslvlyfkleepvek.....easpafkellerflkgdevedaFrrerlKiiakivkgswivkklv...ynekpvlvgkrlqtkyvrgenylEidvdihs.ssvarkilelvlgylkklvlDlalliegqteeELPErvLgavrln 224
                  kK p++  l+++++v +++s++       + + +  +el++  ++++ +++p  lvv   +P++a+++++++   e+ ++v +f +++   +     ++ +   +l e +  +  +e++  + r+K i  iv+ s +   ++   yn+kpvl+ k  + +  r++  +E++v++h   +  rk++++++ +   +vlD a++ieg++ eE PE+v+g+ rl+
  MMETSP1325-20131115|10171_1   2 KKAPSGPALYEVLSVKMLSSPTLvenpteAAHASGMPELPApiETTHFEHIPRYLVVAWNLPTGAPSMMNAPSsAEEVCVVYTFGMTSATAAaladlDTASPAIKLWEAYCRDASDENTEMKGRFKAITTIVNFSEVNVPSMlsgYNSKPVLIKK--TGSLSRRDDVIEMNVNVHTwPFTTRKGFNVLIPSFPAMVLDSAFVIEGRSDEEVPEQVVGCARLS 221
                  78999999*********99999535666555666666655411444445899*****************665527777777778777776666786777777899*******666668888************777766666699*******888..88999**********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 1219.48
//
Query:       MMETSP1325-20131115|10172_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 880.40
//
Query:       MMETSP1325-20131115|10173_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-07   30.9   1.2    1.7e-07   30.7   0.8    1.1  1  PF03382.9 Mycoplasma protein of unknown function, DUF285


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.8   1.2e-11   1.7e-07      26      63 ..       3      40 ..       1      59 [. 0.61

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 1.2e-11
    PF03382.9 26 tdmssmFsgakkfnqdiskWdtsnVtnmsemFsgatsf 63
                 ++m+ mF ga++f  dis+W+++   +m++mF ++  f
  MMETSP1325-20131115|10173_1  3 KSMQWMFDGASSFSVDISQWNVNANLSMNYMFPQSHVF 40
                 45556666666666666666666666666666555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 517.61
//
Query:       MMETSP1325-20131115|10175_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00049   19.8   0.0     0.0061   16.2   0.0    2.0  2  PF00657.17 GDSL-like Lipase/Acylhydrolase
  ------ inclusion threshold ------
      0.013   15.5   0.2      0.044   13.7   0.0    1.9  2  PF13472.1  GDSL-like Lipase/Acylhydrolase family
      0.091   11.9  17.6       0.13   11.4  12.2    1.2  1  PF07174.6  Fibronectin-attachment protein (FAP)
       0.66    8.1   6.3       0.91    7.6   4.4    1.1  1  PF05616.8  Neisseria meningitidis TspB protein
       0.81    7.8   6.4        1.1    7.4   4.4    1.1  1  PF03276.9  Spumavirus gag protein
        1.9    8.6   7.4        3.1    8.0   5.1    1.4  1  PF04880.8  NUDE protein, C-terminal conserved region


Domain annotation for each model (and alignments):
>> PF00657.17  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.083   1.9e+02      89     123 ..      13      71 ..       8      77 .. 0.74
   2 !   16.2   0.0   2.7e-06    0.0061     206     234 .]     189     222 ..     148     222 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.083
                  E---TTT...........................ECE.SSSEEEHHHHHHHHHHHHHHHH CS
   PF00657.17  89 qiGaNDllt.........................eslkntqnasvpevrdnlrslikrly 123
                  q+++N  ++                         + l+++q++s+++v+++ ++li r++
  MMETSP1325-20131115|10175_1  13 QAFGNE-CRvvfpalpvswttafpqpmraavmvvAELWDAQKKSLADVQKSTTKLIRRVT 71 
                  566666.4556666666666666666666666667899******************9987 PP

  == domain 2    score: 16.2 bits;  conditional E-value: 2.7e-06
                  HGGGHH.....HTCCCSSTTSB-CCCHHHHHHHH CS
   PF00657.17 206 lqnpen.....ssylfwDgfHptekghkavaeal 234
                  +q+pe+     s+ +  Dg+Hp+++g++++a+++
  MMETSP1325-20131115|10175_1 189 QQEPEDfsggySRCMADDGVHPNAEGYSIWAKHI 222
                  344444999999999****************997 PP

>> PF13472.1  GDSL-like Lipase/Acylhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.48   1.1e+03      87      96 ..      59      68 ..       4     135 .. 0.58
   2 ?   13.7   0.0   1.9e-05     0.044     158     179 .]     197     218 ..     170     218 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.48
    PF13472.1 87 yeanlaaild 96
                 +++  +++++
  MMETSP1325-20131115|10175_1 59 VQKSTTKLIR 68
                 2222222222 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 1.9e-05
    PF13472.1 158 gwdkdllapdglHPnaaGyaai 179
                  g +++ +a+dg+HPna+Gy ++
  MMETSP1325-20131115|10175_1 197 GGYSRCMADDGVHPNAEGYSIW 218
                  33445566***********987 PP

>> PF07174.6  Fibronectin-attachment protein (FAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4  12.2   5.8e-05      0.13      34     111 ..     101     187 ..      65     216 .. 0.54

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 5.8e-05
    PF07174.6  34 PavanadPePaPsapPstaaaaPapaa.pvaepapaaapap..apadpnaaaPpapadPnap......vPppvdPnapappapepgr 111
                  Pa a+a    + sa+ s++a+aPapa+ p ++papa+apa   +pa + aa+P++pa P +       v     P ap+ ++ e+g 
  MMETSP1325-20131115|10175_1 101 PASASASAPASASASASASASAPAPASaPASAPAPASAPALglEPASAAAASPASPAHPASGlvrrgvVDFICKPSAPTMADRETGE 187
                  555555432233355555556666553133444555444447788888888888788776541111113444567777777766665 PP

>> PF05616.8  Neisseria meningitidis TspB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   4.4    0.0004      0.91     302     403 ..      94     198 ..      81     206 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0004
    PF05616.8 302 dsqgnttvdvqviprpdltpgsaeapeakplpevspaenpannedpd..endgtrpnpepdpdlnpdanpdtdgqpg..trpdspavpdrpngrhrkerkegedgg 403
                  d+ g           p  + +sa a  + p p+ +pa  pa   +p    ++ +     p     p +     g      +p +p++ dr  g +++e   +  gg
  MMETSP1325-20131115|10175_1  94 DATGGLEPASASASAPASASASASASASAPAPASAPASAPAPASAPAlgLEPASAAAASPASPAHPASGLVRRGVVDfiCKPSAPTMADRETGEQQQEPE-DFSGG 198
                  5555555555555566777778888888888888888877766666522467777777777777777776666654322799********9998888754.44454 PP

>> PF03276.9  Spumavirus gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.4   0.00047       1.1     133     237 ..      51     160 ..      37     184 .. 0.49

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00047
    PF03276.9 133 mqrdeleevldiqgeielqlidlielqeaeirlLrellaelqssglgaalPgasaskPPsslvglpvalsslapaasstpge.....rlarvafnpfle.aespaqPsaps 237
                   q++ l +v + ++++  ++    +  ++e  ++ e++a++++  +g+  P +++   P+s ++ ++a++s apa +s+p++     +++ +  +p    a spa P  p+
  MMETSP1325-20131115|10175_1  51 AQKKSLADVQKSTTKLIRRVTRRAQGLDTEAAAIGEATAHRTRDATGGLEPASASASAPASASASASASAS-APAPASAPASapapaSAPALGLEPASAaAASPASPAHPA 160
                  45555555555555555566666666666666666666666666666666655555555444444433322.222222222212222455555555433023344444442 PP

>> PF04880.8  NUDE protein, C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.1    0.0014       3.1      50     130 ..      89     169 ..      54     189 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0014
    PF04880.8  50 rerlrevnrksrpapvqaslslPatpvtenslpspkslpngivaspltPsa..klslklaaavakdqasrkseisssvnslva 130
                    r r+ +    pa+  as+s Pa   + +s ++++  p +  as  +P++   l l+ a+a a  +as+    s+ v+ +v+
  MMETSP1325-20131115|10175_1  89 AHRTRDATGGLEPAS--ASASAPASASASASASASAPAPASAPASAPAPASapALGLEPASAAAASPASPAHPASGLVRRGVV 169
                  456677777777777..99999997777555555544455554444444431146667799***************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       610  (0.0446167); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.39s 00:00:01.04 Elapsed: 00:00:00.57
# Mc/sec: 1078.36
//
Query:       MMETSP1325-20131115|10176_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-20   70.6   2.6      7e-11   41.4   0.0    2.8  3  PF13414.1  TPR repeat
    2.1e-19   67.6   0.0    7.2e-05   22.2   0.0    3.5  3  PF07719.12 Tetratricopeptide repeat
    7.8e-19   66.3   0.0    7.6e-05   22.0   0.0    3.2  3  PF00515.23 Tetratricopeptide repeat
    7.2e-17   59.7   0.0      9e-05   21.8   0.0    3.4  3  PF13181.1  Tetratricopeptide repeat
    1.2e-15   56.2   1.6     0.0011   18.9   0.0    4.2  4  PF13431.1  Tetratricopeptide repeat
    2.7e-15   55.9   0.5    3.6e-10   39.5   0.0    2.4  2  PF13424.1  Tetratricopeptide repeat
    9.7e-13   47.4   0.0    5.1e-06   26.5   0.1    3.4  3  PF13428.1  Tetratricopeptide repeat
    3.2e-12   46.6   1.4    0.00033   21.1   1.7    3.2  3  PF13432.1  Tetratricopeptide repeat
      2e-10   40.2   0.8    0.00067   19.8   0.0    3.6  3  PF13174.1  Tetratricopeptide repeat
      1e-09   37.3   0.3       0.02   14.5   0.0    3.4  3  PF13176.1  Tetratricopeptide repeat
    7.9e-09   35.0   0.1       0.15   12.4   0.0    3.7  4  PF07721.9  Tetratricopeptide repeat
    1.8e-06   27.5   2.2     0.0066   16.1   0.0    3.9  4  PF13374.1  Tetratricopeptide repeat
     0.0022   17.9   0.3      0.012   15.6   0.1    2.2  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
     0.0024   17.5   0.6        2.5    7.8   0.4    3.0  3  PF13371.1  Tetratricopeptide repeat
      0.003   17.7   3.2     0.0073   16.5   2.2    1.7  1  PF03704.12 Bacterial transcriptional activator domain
  ------ inclusion threshold ------
      0.015   14.5   0.1        3.7    6.7   0.0    2.4  2  PF10602.4  26S proteasome subunit RPN7
       0.12   11.4   0.0       0.15   11.1   0.0    1.1  1  PF04090.7  RNA polymerase I specific initiation factor


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   4.6e-08   3.7e-05      31      67 ..       2      37 ..       1      39 [. 0.90
   2 !   41.4   0.0   8.8e-14     7e-11       4      69 .]      51     115 ..      49     115 .. 0.96
   3 !   17.4   0.4   2.9e-06    0.0023       9      51 ..      90     132 ..      90     140 .. 0.87

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 4.6e-08
    PF13414.1 31 eldpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                 + d++++++++nl+ +y  lg+  +eA+ +++ A++ 
  MMETSP1325-20131115|10176_1  2 QADKKDPDVHNNLGTIYAGLGE-LDEAVNHFQVAMQH 37
                 57899****************6.79*******99985 PP

  == domain 2    score: 41.4 bits;  conditional E-value: 8.8e-14
    PF13414.1   4 ealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                  +al +lG  l+ +gd  +A ++++k++++d ++ +++ +++ a+l  g    eA e +ekAl+  P
  MMETSP1325-20131115|10176_1  51 KALLNLGRTLLMKGDTTQATQCFQKCIRYDDQSSDALIGMGEALLATG-SAAEAEESFEKALKHEP 115
                  5899********************************************.689**********9876 PP

  == domain 3    score: 17.4 bits;  conditional E-value: 2.9e-06
    PF13414.1   9 lGnalfkegdydeAieayekAleldpnnaelyynlAlaylklg 51 
                  +G+al+  g  +eA+e +ekAl+ +p+n e+   lA++   + 
  MMETSP1325-20131115|10176_1  90 MGEALLATGSAAEAEESFEKALKHEPSNEEAQDHLAKIAASKR 132
                  699999**************************99999987654 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   1.2e-07   9.8e-05       1      30 [.       8      37 ..       8      39 .. 0.92
   2 !   19.7   0.0   5.9e-07   0.00047       2      32 ..      51      81 ..      50      83 .. 0.93
   3 !   22.2   0.0   8.9e-08   7.2e-05       2      34 .]      85     117 ..      84     117 .. 0.95

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 1.2e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF07719.12  1 aealynlGlayyklgdyeeAleafekAlel 30
                 +++++nlG +y+ lg+++eA+++f+ A ++
  MMETSP1325-20131115|10176_1  8 PDVHNNLGTIYAGLGELDEAVNHFQVAMQH 37
                 579**********************99876 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 5.9e-07
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
   PF07719.12  2 ealynlGlayyklgdyeeAleafekAleldP 32
                 +al nlG+ ++ +gd  +A ++f+k++++d 
  MMETSP1325-20131115|10176_1 51 KALLNLGRTLLMKGDTTQATQCFQKCIRYDD 81
                 799*************************986 PP

  == domain 3    score: 22.2 bits;  conditional E-value: 8.9e-08
                  HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
   PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                  +al  +G+a+++ g  +eA+e fekAl+++P n
  MMETSP1325-20131115|10176_1  85 DALIGMGEALLATGSAAEAEESFEKALKHEPSN 117
                  68999**************************87 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   9.5e-08   7.6e-05       1      25 [.       8      32 ..       8      37 .. 0.94
   2 !   20.5   0.0   2.7e-07   0.00022       2      31 ..      51      80 ..      50      83 .. 0.93
   3 !   20.4   0.0     3e-07   0.00024       2      34 .]      85     117 ..      84     117 .. 0.96

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 9.5e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHH CS
   PF00515.23  1 akalynlGnaylklgkydeAleyye 25
                 +++++nlG +y  lg++deA+ +++
  MMETSP1325-20131115|10176_1  8 PDVHNNLGTIYAGLGELDEAVNHFQ 32
                 589********************98 PP

  == domain 2    score: 20.5 bits;  conditional E-value: 2.7e-07
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
   PF00515.23  2 kalynlGnaylklgkydeAleyyekALeln 31
                 kal nlG ++l +g+  +A ++++k+++ +
  MMETSP1325-20131115|10176_1 51 KALLNLGRTLLMKGDTTQATQCFQKCIRYD 80
                 89*************************876 PP

  == domain 3    score: 20.4 bits;  conditional E-value: 3e-07
                  HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
   PF00515.23   2 kalynlGnaylklgkydeAleyyekALelnPnn 34 
                  +al ++G a+l  g   eA+e +ekAL+++P+n
  MMETSP1325-20131115|10176_1  85 DALIGMGEALLATGSAAEAEESFEKALKHEPSN 117
                  8999***************************98 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   2.9e-06    0.0023       3      25 ..      10      32 ..       8      38 .. 0.92
   2 !   21.8   0.0   1.1e-07     9e-05       2      32 ..      51      81 ..      50      83 .. 0.94
   3 !   16.5   0.0   5.6e-06    0.0045       3      33 ..      86     117 ..      84     118 .. 0.90

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 2.9e-06
                 -TTT---HHHHTT-HHHHHHHHH CS
    PF13181.1  3 ayynlGdiYrqlGdydkAkeyle 25
                 +++nlG iY+ lG+ d+A ++++
  MMETSP1325-20131115|10176_1 10 VHNNLGTIYAGLGELDEAVNHFQ 32
                 799******************97 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 1.1e-07
                 --TTT---HHHHTT-HHHHHHHHH---HHHH CS
    PF13181.1  2 kayynlGdiYrqlGdydkAkeylekalelkp 32
                 ka++nlG++++ +Gd+ +A ++++k++ ++ 
  MMETSP1325-20131115|10176_1 51 KALLNLGRTLLMKGDTTQATQCFQKCIRYDD 81
                 799*************************985 PP

  == domain 3    score: 16.5 bits;  conditional E-value: 5.6e-06
                  -TTT---HHHHTT-HHHHHHHHH---HHHH.. CS
    PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkp.r 33 
                  a++ +G++++ +G   +A+e++ekal+  p +
  MMETSP1325-20131115|10176_1  86 ALIGMGEALLATGSAAEAEESFEKALKHEPsN 117
                  78899**********************98844 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.3e-06    0.0011       8      33 ..       3      28 ..       2      29 .. 0.92
   2 !   12.1   0.0   0.00019      0.15       9      32 ..      46      69 ..      44      71 .. 0.91
   3 !   15.6   0.0   1.5e-05     0.012       1      34 []      72     105 ..      72     105 .. 0.95
   4 ?    6.2   0.0     0.016        13       2      24 ..     107     129 ..     106     141 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1.3e-06
    PF13431.1  8 ldPnnadaynnLAelllnnGdleeAe 33
                  d++++d++nnL+++++ +G+l+eA 
  MMETSP1325-20131115|10176_1  3 ADKKDPDVHNNLGTIYAGLGELDEAV 28
                 5899********************96 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00019
    PF13431.1  9 dPnnadaynnLAelllnnGdleeA 32
                 + +++ a+ nL+++ll +Gd+ +A
  MMETSP1325-20131115|10176_1 46 NSTHFKALLNLGRTLLMKGDTTQA 69
                 78999***************9998 PP

  == domain 3    score: 15.6 bits;  conditional E-value: 1.5e-05
    PF13431.1   1 lyekaleldPnnadaynnLAelllnnGdleeAeq 34 
                  +++k++++d  ++da+  ++e+ll+ G  +eAe+
  MMETSP1325-20131115|10176_1  72 CFQKCIRYDDQSSDALIGMGEALLATGSAAEAEE 105
                  79*************************9999985 PP

  == domain 4    score: 6.2 bits;  conditional E-value: 0.016
    PF13431.1   2 yekaleldPnnadaynnLAelll 24 
                  +ekal+++P n +a   LA++ +
  MMETSP1325-20131115|10176_1 107 FEKALKHEPSNEEAQDHLAKIAA 129
                  89*********999888887765 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   4.5e-13   3.6e-10       6      75 ..       9      79 ..       6      82 .. 0.93
   2 !   14.7   0.1   2.4e-05     0.019      46      74 ..      84     112 ..      78     116 .. 0.87

  Alignments for each domain:
  == domain 1    score: 39.5 bits;  conditional E-value: 4.5e-13
    PF13424.1  6 tilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75
                 +++nnl++++  lg++deA ++++ a++    el+  +    +al+nl++++l +gd  +A ++++k+++ 
  MMETSP1325-20131115|10176_1  9 DVHNNLGTIYAGLGELDEAVNHFQVAMQHsEFELPSYNSTHFKALLNLGRTLLMKGDTTQATQCFQKCIRY 79
                 689**************************8779998777779*************************9975 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 2.4e-05
    PF13424.1  46 aralnnlanlylalgdydeAleylekAle 74 
                   +al  +++++la g  +eA+e +ekAl+
  MMETSP1325-20131115|10176_1  84 SDALIGMGEALLATGSAAEAEESFEKALK 112
                  578999*********************98 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0056       4.5       3      25 ..      10      32 ..       8      39 .. 0.84
   2 !   13.3   0.0   0.00011     0.089       2      43 ..      51      92 ..      50      93 .. 0.93
   3 !   26.5   0.1   6.3e-09   5.1e-06       2      43 ..      85     126 ..      84     127 .. 0.94

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0056
    PF13428.1  3 allalarallalGdpdeAiallr 25
                 ++  l+ +++ lG++deA+++++
  MMETSP1325-20131115|10176_1 10 VHNNLGTIYAGLGELDEAVNHFQ 32
                 6678999*************998 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 0.00011
    PF13428.1  2 eallalarallalGdpdeAiallrralalaPddaealllLar 43
                 +all l+r ll  Gd+ +A +++++ ++ + ++ +al+ +++
  MMETSP1325-20131115|10176_1 51 KALLNLGRTLLMKGDTTQATQCFQKCIRYDDQSSDALIGMGE 92
                 799*************************999999**999987 PP

  == domain 3    score: 26.5 bits;  conditional E-value: 6.3e-09
    PF13428.1   2 eallalarallalGdpdeAiallrralalaPddaealllLar 43 
                  +al  +++alla G  +eA++ +++al++ P+++ea+ +La+
  MMETSP1325-20131115|10176_1  85 DALIGMGEALLATGSAAEAEESFEKALKHEPSNEEAQDHLAK 126
                  57889***********************************97 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   0.00017      0.14      29      57 ..       6      34 ..       2      41 .. 0.86
   2 !    8.3   0.0     0.004       3.2      31      52 ..      50      71 ..      38      86 .. 0.85
   3 !   21.1   1.7   4.1e-07   0.00033       3      51 ..      90     138 ..      88     146 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00017
    PF13432.1 29 eaaeallllaeallrlgrldeAaallraa 57
                 ++++++ +l+ +++ lg+ldeA+  ++ a
  MMETSP1325-20131115|10176_1  6 KDPDVHNNLGTIYAGLGELDEAVNHFQVA 34
                 6899******************9888877 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.004
    PF13432.1 31 aeallllaeallrlgrldeAaa 52
                   all+l+++ll++g+  +A +
  MMETSP1325-20131115|10176_1 50 FKALLNLGRTLLMKGDTTQATQ 71
                 579***************9976 PP

  == domain 3    score: 21.1 bits;  conditional E-value: 4.1e-07
    PF13432.1   3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAa 51 
                   ++all+ G  +eA++ +e+al+ +P + ea+  la +++ +   + Aa
  MMETSP1325-20131115|10176_1  90 MGEALLATGSAAEAEESFEKALKHEPSNEEAQDHLAKIAASKRASQNAA 138
                  589************************************9665555554 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.023        19       5      25 ..      13      33 ..      13      36 .. 0.89
   2 !   19.8   0.0   8.4e-07   0.00067       2      29 ..      52      79 ..      51      83 .. 0.92
   3 !   11.3   0.0   0.00043      0.34       1      31 [.      85     115 ..      85     117 .. 0.91

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.023
                 HHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1  5 klalsyyklgdtdeAlealer 25
                 +l+ +y  lg+ deA+  ++ 
  MMETSP1325-20131115|10176_1 13 NLGTIYAGLGELDEAVNHFQV 33
                 68999**999********996 PP

  == domain 2    score: 19.8 bits;  conditional E-value: 8.4e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1  2 AlyklalsyyklgdtdeAlealerlike 29
                 Al++l++ +++ gdt++A + ++++i+ 
  MMETSP1325-20131115|10176_1 52 ALLNLGRTLLMKGDTTQATQCFQKCIRY 79
                 9**********99************985 PP

  == domain 3    score: 11.3 bits;  conditional E-value: 0.00043
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
    PF13174.1   1 dAlyklalsyyklgdtdeAlealerlikeyP 31 
                  dAl  ++++++++g ++eA e +e+ +k  P
  MMETSP1325-20131115|10176_1  85 DALIGMGEALLATGSAAEAEESFEKALKHEP 115
                  79999*******99***********998666 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   2.5e-05      0.02       2      31 ..      11      38 ..      10      42 .. 0.86
   2 !   12.2   0.0   0.00014      0.11       1      33 [.      52      82 ..      52      85 .. 0.92
   3 !    7.1   0.0    0.0059       4.8       1      35 [.      86     118 ..      86     119 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 2.5e-05
    PF13176.1  2 llnLarlysrlgdyekAielyeraLaltkd 31
                 ++nL+ +y  lg+ ++A+++++   a+  +
  MMETSP1325-20131115|10176_1 11 HNNLGTIYAGLGELDEAVNHFQV--AMQHS 38
                 79*******************98..66655 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 0.00014
    PF13176.1  1 allnLarlysrlgdyekAielyeraLaltkdpl 33
                 allnL+r+    gd+ +A +++++   +++d++
  MMETSP1325-20131115|10176_1 52 ALLNLGRTLLMKGDTTQATQCFQK--CIRYDDQ 82
                 89******9999************..9999986 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0059
    PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdplda 35 
                  al  ++++  + g   +A+e +e+  al+ +p+++
  MMETSP1325-20131115|10176_1  86 ALIGMGEALLATGSAAEAEESFEK--ALKHEPSNE 118
                  678899999999999*********..999888876 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00059      0.47       3      23 ..      10      30 ..       8      32 .. 0.87
   2 !    7.3   0.0    0.0081       6.6       3      22 ..      52      71 ..      51      75 .. 0.89
   3 !   12.4   0.0   0.00019      0.15       3      25 ..      86     108 ..      85     109 .. 0.90
   4 ?   -1.9   0.1       7.7   6.2e+03      18      25 ..     118     125 ..     118     126 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00059
                 HH---HHHHHH-------HHH CS
    PF07721.9  3 allaLArallalGdldeAral 23
                 ++ +L+  ++ lG+ldeA  +
  MMETSP1325-20131115|10176_1 10 VHNNLGTIYAGLGELDEAVNH 30
                 6789**************876 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0081
                 HH---HHHHHH-------HH CS
    PF07721.9  3 allaLArallalGdldeAra 22
                 all+L+r+ll  Gd  +A +
  MMETSP1325-20131115|10176_1 52 ALLNLGRTLLMKGDTTQATQ 71
                 89**************9976 PP

  == domain 3    score: 12.4 bits;  conditional E-value: 0.00019
                  HH---HHHHHH-------HHHHH CS
    PF07721.9   3 allaLArallalGdldeAralle 25 
                  al+++++alla G ++eA++ +e
  MMETSP1325-20131115|10176_1  86 ALIGMGEALLATGSAAEAEESFE 108
                  7999***************8766 PP

  == domain 4    score: -1.9 bits;  conditional E-value: 7.7
                  ---HHHHH CS
    PF07721.9  18 deAralle 25 
                  +eA+++l+
  MMETSP1325-20131115|10176_1 118 EEAQDHLA 125
                  69999986 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   8.3e-06    0.0066       6      30 ..      12      36 ..       9      39 .. 0.88
   2 ?    3.7   0.0      0.07        56       4      28 ..      52      76 ..      51      80 .. 0.86
   3 ?    4.6   0.0     0.036        29       3      30 ..      85     112 ..      83     114 .. 0.88
   4 ?   -0.5   0.1       1.5   1.2e+03      19      34 ..     118     133 ..     117     137 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 8.3e-06
    PF13374.1  6 nnLAlalrargryeeAlaleeeala 30
                 nnL+ +++ +g+++eA+++++ a+ 
  MMETSP1325-20131115|10176_1 12 NNLGTIYAGLGELDEAVNHFQVAMQ 36
                 *******************987765 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.07
    PF13374.1  4 alnnLAlalrargryeeAlaleeea 28
                 al nL+++l   g++ +A + ++++
  MMETSP1325-20131115|10176_1 52 ALLNLGRTLLMKGDTTQATQCFQKC 76
                 789************9999888876 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.036
    PF13374.1   3 aalnnLAlalrargryeeAlaleeeala 30 
                  +al   + al a+g  +eA++ +e+al 
  MMETSP1325-20131115|10176_1  85 DALIGMGEALLATGSAAEAEESFEKALK 112
                  67888899*************9999996 PP

  == domain 4    score: -0.5 bits;  conditional E-value: 1.5
    PF13374.1  19 eeAlaleeealairrr 34 
                  eeA +++ +++a +r+
  MMETSP1325-20131115|10176_1 118 EEAQDHLAKIAASKRA 133
                  8999999999999887 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.82   6.6e+02      65      82 ..      15      32 ..       3      34 .. 0.77
   2 !   15.6   0.1   1.5e-05     0.012       9      84 .]      28     110 ..      21     110 .. 0.80

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.82
                 HHHHHHTT-HHHHCCCHH CS
    PF12895.2 65 ArcllklgkydeAiavLe 82
                 +  +  lg++deA ++++
  MMETSP1325-20131115|10176_1 15 GTIYAGLGELDEAVNHFQ 32
                 566777999****99986 PP

  == domain 2    score: 15.6 bits;  conditional E-value: 1.5e-05
                  HHHHHHHCCC-ST.....-H.HHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHHHH CS
    PF12895.2   9 lflaekllaespk.....dp.edaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavLeka 84 
                  + +++ +++ s +     ++ +  +l++l+ +l+  g+ ++A + ++k   +d++s ++ + ++++ll+ g   eA++ +eka
  MMETSP1325-20131115|10176_1  28 VNHFQVAMQHSEFelpsyNStHFKALLNLGRTLLMKGDTTQATQCFQKcIRYDDQSSDALIGMGEALLATGSAAEAEESFEKA 110
                  5555555555544554443336679************************99999997888888****************9986 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.012       9.9      28      59 ..       7      38 ..       2      54 .. 0.85
   2 ?    1.8   0.0      0.24     2e+02      36      65 ..      57      86 ..      46      90 .. 0.79
   3 !    7.8   0.4    0.0032       2.5       9      66 ..      64     121 ..      56     130 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.012
    PF13371.1 28 dpyerRDrGlllaqlgclaaAaedLeaflelc 59
                 dp  +   G ++a lg+l +A++ ++ +++++
  MMETSP1325-20131115|10176_1  7 DPDVHNNLGTIYAGLGELDEAVNHFQVAMQHS 38
                 66667788***************999988887 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.24
    PF13371.1 36 GlllaqlgclaaAaedLeaflelcpdapda 65
                 G  l   g+ ++A ++++ ++  +++ +da
  MMETSP1325-20131115|10176_1 57 GRTLLMKGDTTQATQCFQKCIRYDDQSSDA 86
                 55566668999**********888777776 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0032
    PF13371.1   9 edferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapdae 66 
                  +d+ +A ++ +  ++ + ++   +   G +l  +g  a+A e +e +l+++p+ ++a+
  MMETSP1325-20131115|10176_1  64 GDTTQATQCFQKCIRYDDQSSDALIGMGEALLATGSAAEAEESFEKALKHEPSNEEAQ 121
                  566666666666666666666666677999999*******************777665 PP

>> PF03704.12  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   2.2   9.1e-06    0.0073      43     130 ..      65     154 ..      23     161 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 9.1e-06
   PF03704.12  43 dvragpwleaererleelrlealealieadlrlgrheellaelealvalhPlrErlhrqlmr.AlyrsGrqaeALevY.rrlrrrLaeeL 130
                  d ++ +++ +++ r++++   al  + ea l++g ++e+ +  e++++++P +E+++ +l + A  +   q++AL+   r+ rr +++eL
  MMETSP1325-20131115|10176_1  65 DTTQATQCFQKCIRYDDQSSDALIGMGEALLATGSAAEAEESFEKALKHEPSNEEAQDHLAKiAASKRASQNAALRKSrRDSRRKMRREL 154
                  3444788999999********************************************999633566666677777655156888888887 PP

>> PF10602.4  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.014        12      38      64 ..      10      36 ..       6      40 .. 0.89
   2 ?    6.7   0.0    0.0046       3.7      38      76 ..      52      91 ..      44     113 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.014
    PF10602.4 38 aledlaehYlkigdleeAlkaysrard 64
                  +++l+  Y+  g+l+eA++ ++ a++
  MMETSP1325-20131115|10176_1 10 VHNNLGTIYAGLGELDEAVNHFQVAMQ 36
                 6899****************9998876 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0046
    PF10602.4 38 aledlaehYlkigdleeAlkaysr.ardyctslkhkidml 76
                 al++l++  l+ gd+ +A +++++ +r +  s+++ i m 
  MMETSP1325-20131115|10176_1 52 ALLNLGRTLLMKGDTTQATQCFQKcIRYDDQSSDALIGMG 91
                 78999*******************6666677777777765 PP

>> PF04090.7  RNA polymerase I specific initiation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00019      0.15      28     107 ..      37     116 ..      24     144 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00019
    PF04090.7  28 dskseirsyktkhienltqllhlnilrrnwklAykiFslLiRlpevdirsiWplGveiLekleeetssekflewlssvys 107
                  +s+ e+ sy+ +h ++l +l  + +++ +   A ++F   iR ++ +  ++ ++G  +L   +  +++e f + l++  s
  MMETSP1325-20131115|10176_1  37 HSEFELPSYNSTHFKALLNLGRTLLMKGDTTQATQCFQKCIRYDDQSSDALIGMGEALLATGSAAEAEESFEKALKHEPS 116
                  456678899*********************************************************99999888876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       911  (0.0666325); expected 273.4 (0.02)
Passed bias filter:                      590  (0.0431539); expected 273.4 (0.02)
Passed Vit filter:                        73  (0.00533938); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.61u 0.39s 00:00:01.00 Elapsed: 00:00:01.14
# Mc/sec: 379.25
//
Query:       MMETSP1325-20131115|10177_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-58  196.3   0.0    6.7e-58  196.2   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.2   0.0   4.9e-62   6.7e-58     150     315 ..       2     170 ..       1     171 [] 0.97

  Alignments for each domain:
  == domain 1    score: 196.2 bits;  conditional E-value: 4.9e-62
                  HHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT--.....--EEEEE--.-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT.----- CS
   PF00632.20 150 eYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelh.....pkftivrksededrLPtasTCfnyLkLpdYsskeilkekLltAieegqegFel 315
                  eY++l+  +++++++k q+eaf++Gf+e++  ++++lf+++elelli+G ++ id+ dl++nt+y+ +++ ++p+i ++w+++k+++ ee++lfL+FvTG+s++P++Gf++l+     +kf i++   ++  LP a+TCfn+L+Lp+Y+s+e+ +ekLl+A++eg+egF +
  MMETSP1325-20131115|10177_1   2 EYVRLISRHRMTTGIKSQIEAFLEGFHELVSPDLISLFNEKELELLISGLPE-IDLADLEANTDYN-NFKPSDPQIVWFWNVMKTLTHEEKALFLQFVTGTSKVPIEGFSNLQgmrgvQKFNIHKAFGQNGGLPQAHTCFNQLDLPEYTSEEQTREKLLMALREGNEGFAF 170
                  9***************************************************.*************.6*********************************************999999******9966668*************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 819.55
//
Query:       MMETSP1325-20131115|10178_1  [L=613]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-58  197.3   0.2    2.4e-58  197.0   0.2    1.1  1  PF00566.13 Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> PF00566.13  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.0   0.2   1.8e-62   2.4e-58       2     214 .]     174     395 ..     173     395 .. 0.96

  Alignments for each domain:
  == domain 1    score: 197.0 bits;  conditional E-value: 1.8e-62
   PF00566.13   2 elRgevWklllgykp.........kvkrlksseekqeeskkqksklekeedskeesqIkkDvpRtfpedelfkneegqnqLeriLkayaiynpeigYcqGmnfiaallLlvvldeeeafwcfvsLl.nkklrdlfkpslpglqrdlqileellkkhdpelykhlekeeldlslfaikWfltlfvrelpletvlrlwD.lflegakflllrialailkllrkell 214
                  elR +vW  ++g+           ++ +l s+   +  + + +s+  +++++++  qI+kD++Rtfp++++f+neeg  +L+r+L+ay+++npe+gYcq+mnfi a+lL +++dee++fw++ +++ +    +++  ++ gl   + +l+ +l+ ++p+++khl + e+dl++++++Wf++lf+++lpl+++lr+wD +f+eg k  l ri+lai+kl+++el+
  MMETSP1325-20131115|10178_1 174 ELREQVWWRCSGAATkkrnapaeeQYPHLVSKLPVEIADPHHSSDDANDANNTDACQIEKDLQRTFPTNSRFQNEEGIASLRRVLLAYSRRNPELGYCQSMNFITAMLL-LHMDEESSFWMLAAIIeDLLPCEYYAGNMTGLCVEQRVLQSCLSWKLPKVHKHLLEYEVDLDQISVPWFMCLFLNSLPLDVTLRVWDcFFYEGFKA-LHRISLAIFKLKQPELM 395
                  79***********889*******99999999999*********************************99****************************************.899*************888889*********999999**************************************************7777**999.************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.93u 0.39s 00:00:01.32 Elapsed: 00:00:00.60
# Mc/sec: 2448.28
//
Query:       MMETSP1325-20131115|10179_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.056   13.5   3.7      0.092   12.8   2.5    1.4  1  PF00032.12 Cytochrome b(C-terminal)/b6/petD


Domain annotation for each model (and alignments):
>> PF00032.12  Cytochrome b(C-terminal)/b6/petD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.5   6.7e-06     0.092      13      92 ..      79     166 ..      75     183 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.7e-06
   PF00032.12  13 PeWYflpfYaiLrsip........nkllGvlalvlsilillllplldkskvrslr.yrpllkllfwlfvvsfllLtwlGaqpveepyil 92 
                  P++++  +Y +Lr i         + l  ++++vl + i+ l+   d+ k ++++  + ++ ++ w +++++l+L  l a+ +++  ++
  MMETSP1325-20131115|10179_1  79 PQYWYFEAYIMLRRILltsgslcfDDLSSMIVFVLMVSIVTLVF-EDQAKPHTNKfLSAFCYCMSWQVLLCILMLLLLDAKMTSKEGAM 166
                  77666689******877777777788888888777777755555.46666666661455558899999999999988888776664443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       666  (0.0487127); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 1029.02
//
Query:       MMETSP1325-20131115|10181_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.045   13.2   0.7      0.071   12.5   0.5    1.3  1  PF10812.3 Protein of unknown function (DUF2561)


Domain annotation for each model (and alignments):
>> PF10812.3  Protein of unknown function (DUF2561)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.5   5.2e-06     0.071      64     119 ..      44     102 ..      29     106 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.2e-06
    PF10812.3  64 WvLYavivvsalviva....avPlLLraRraaeaepaarsvklarragesvragaaeara 119
                  W L  +i+v+++ +      a+   +r Rr+a+aep+ r+ +++ r+ +++++++a+ r 
  MMETSP1325-20131115|10181_1  44 WQLN-LIGVAIAAVLFavtfALCKFVRDRRTAQAEPQYRKLGQQVRPHATTPSKQAADRP 102
                  6553.4555544444401124445689********************9999998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 512.82
//
Query:       MMETSP1325-20131115|10182_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.1    4.5   8.7        6.8    4.4   6.0    1.0  1  PF06933.6 Special lobe-specific silk protein SSP160


Domain annotation for each model (and alignments):
>> PF06933.6  Special lobe-specific silk protein SSP160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   6.0    0.0005       6.8      98     131 ..      17      50 ..      10      69 .. 0.59

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0005
    PF06933.6  98 iqsgsgsasssssssatstssststtssssttss 131
                  +  gs   s++s+ sa+s++ss+stt       +
  MMETSP1325-20131115|10182_1  17 LSNGSANDSAASAGSANSATSSNSTTGGMNGVKA 50 
                  5567777777777777777777777764433322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       512  (0.0374488); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 537.85
//
Query:       MMETSP1325-20131115|10184_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       567  (0.0414716); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|10185_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 567.30
//
Query:       MMETSP1325-20131115|10186_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   14.0   0.1      0.038   13.4   0.1    1.3  1  PF01849.13 NAC domain
      0.049   13.0   1.5      0.061   12.7   1.0    1.0  1  PF03286.9  Pox virus Ag35 surface protein


Domain annotation for each model (and alignments):
>> PF01849.13  NAC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   5.5e-06     0.038       1      23 [.      53      75 ..      53      83 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 5.5e-06
                 XXXXXXXXXXXX-EEE----EEE CS
   PF01849.13  1 ekKlqkalkklglkeiegveeVt 23
                 e+Kl+k+l+  g+k   ++e+V+
  MMETSP1325-20131115|10186_1 53 ERKLRKTLEAHGIKSEADIERVV 75
                 79********************8 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.0     9e-06     0.061      53     125 ..      36     107 ..      30     115 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 9e-06
    PF03286.9  53 kkkrkttkrkpvkkkkskkkekekeeeeekkeeededkdteenendddekeeskdskesasaneqsdeddede 125
                  k  ++ t+rk ++++++++k ++  e +  k+e d ++  e n+n++++ e+ k++++ +++ +   edd+d+
  MMETSP1325-20131115|10186_1  36 KVTNPMTQRKSAATREKERKLRKTLEAHGIKSEADIERVVEFNNNENKQREGFKSTRQRINELARP-EDDKDQ 107
                  556688899988888888887777777888888899998999999999999999999999998888.566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       974  (0.0712405); expected 273.4 (0.02)
Passed bias filter:                      650  (0.0475424); expected 273.4 (0.02)
Passed Vit filter:                        66  (0.00482738); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.44s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|10187_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00068   18.5   3.8     0.0087   15.0   2.6    2.2  1  PF00641.13 Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
      0.027   13.9   0.3      0.034   13.6   0.2    1.3  1  PF14206.1  Cysteine-rich CPCC
       0.03   13.8   1.6      0.064   12.8   0.7    1.9  1  PF07282.6  Putative transposase DNA-binding domain
       0.13   11.7   5.1        5.2    6.6   0.9    2.7  3  PF04810.10 Sec23/Sec24 zinc finger


Domain annotation for each model (and alignments):
>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   2.6   2.5e-06    0.0087       5      26 ..      18      44 ..      15      46 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.5e-06
   PF00641.13  5 WdCskClvqNfa.....wstkCvaCqa 26
                 W+C++C++ N+      ++++C+ C++
  MMETSP1325-20131115|10187_1 18 WTCTACTFFNSGepaagERVTCEVCGT 44
                 **********96222336899999997 PP

>> PF14206.1  Cysteine-rich CPCC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   9.8e-06     0.034       3      39 ..      19      55 ..      17      91 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 9.8e-06
    PF14206.1  3 qCpcCgyktleeeeeetyeiCpvCfWeddgvqledpd 39
                 +C  C ++   e+  ++  +C+vC  e+d+  + ++ 
  MMETSP1325-20131115|10187_1 19 TCTACTFFNSGEPAAGERVTCEVCGTEQDAPPQGEAG 55
                 7*************************99986555544 PP

>> PF07282.6  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.7   1.9e-05     0.064      29      58 ..      18      48 ..       4      52 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.9e-05
    PF07282.6 29 ktCsvCgsknke.alsgrlfkCpnCgfeadr 58
                  tC  C   n+  + +g++++C+ Cg+e d+
  MMETSP1325-20131115|10187_1 18 WTCTACTFFNSGePAAGERVTCEVCGTEQDA 48
                 49*******999999*************997 PP

>> PF04810.10  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.9    0.0015       5.2      18      35 ..      11      28 ..       1      33 [. 0.73
   2 ?    6.5   0.0    0.0016       5.4      22      39 ..      34      51 ..      31      52 .. 0.88
   3 ?   -3.4   0.0         2   6.8e+03       8      12 ..      56      60 ..      55      61 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0015
   PF04810.10 18 fdeggkrWtCnlCgtrNe 35
                 ++ +g  WtC  C + N 
  MMETSP1325-20131115|10187_1 11 LTTQGEGWTCTACTFFNS 28
                 45599********99875 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0016
   PF04810.10 22 gkrWtCnlCgtrNelppe 39
                 g r tC  Cgt ++ pp+
  MMETSP1325-20131115|10187_1 34 GERVTCEVCGTEQDAPPQ 51
                 6788**********9996 PP

  == domain 3    score: -3.4 bits;  conditional E-value: 2
   PF04810.10  8 Crayl 12
                 C++++
  MMETSP1325-20131115|10187_1 56 CHSII 60
                 99888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      394  (0.028818); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 433.19
//
Query:       MMETSP1325-20131115|10188_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.079   12.3   0.4      0.079   12.3   0.3    1.1  1  PF04340.7 Protein of unknown function, DUF484


Domain annotation for each model (and alignments):
>> PF04340.7  Protein of unknown function, DUF484
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   5.8e-06     0.079      55      91 ..      44      80 ..      23      82 .] 0.92

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5.8e-06
    PF04340.7 55 rireleeelaalmelAraNerlfarllalqldlldar 91
                   r+l+ +l+al el  aN+r++  +  +q++l+ a 
  MMETSP1325-20131115|10188_1 44 SARQLSPRLQALVELTVANNRAARSIATAQRTLSSAA 80
                 67899****************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.46
# Mc/sec: 427.18
//
Query:       MMETSP1325-20131115|10190_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-15   57.5   0.0    1.2e-15   57.5   0.0    1.1  1  PF00481.16 Protein phosphatase 2C
     0.0032   16.8   0.0     0.0032   16.8   0.0    1.1  1  PF13672.1  Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.0   1.7e-19   1.2e-15      76     162 ..      43     131 ..      13     137 .] 0.81

  Alignments for each domain:
  == domain 1    score: 57.5 bits;  conditional E-value: 1.7e-19
                  CHHHHHH.HHCHHHHHHCCS.HTT---EEEEEEESSSEEEEEEE---EEEEEE---EE........EESS---STTSHHHHHHHHH----EE-T- CS
   PF00481.16  76 lrksfladtdeelksseantepsksGstavvalirgqklyvAnvGDSravLcrsdnak........keltedHkpsnedEreRIeeaggsvsngn 162
                  +++++ ++ + +lk      ++++sG+ta+val+++++l vAn+GD+ra+++    +          +++  Hkp+++ E +RIe++g +v++++
  MMETSP1325-20131115|10190_1  43 INETVSKSGKVVLK------SEDSSGATALVALVTPDHLLVANAGDCRAIVVGPSSEGgfgnpweaFRVSIPHKPDSPGELARIEASGSTVNKSE 131
                  44444443333333......4799***************************9998888899****99************************9754 PP

>> PF13672.1  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   4.6e-07    0.0032      92     127 ..      57      92 ..      11     126 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 4.6e-07
    PF13672.1  92 elkdyatTlllavitpgeivffqiGDgaivvrdrdg 127
                  + ++ ++T l+a++tp+++++++ GD++++v+++++
  MMETSP1325-20131115|10190_1  57 SEDSSGATALVALVTPDHLLVANAGDCRAIVVGPSS 92 
                  667889***********************9998543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.31s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 670.00
//
Query:       MMETSP1325-20131115|10189_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1208.16
//
Query:       MMETSP1325-20131115|10191_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 255.61
//
Query:       MMETSP1325-20131115|10194_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.044   11.3   0.2      0.049   11.2   0.1    1.0  1  PF11145.3 Protein of unknown function (DUF2921)


Domain annotation for each model (and alignments):
>> PF11145.3  Protein of unknown function (DUF2921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   3.6e-06     0.049     281     339 ..       9      66 ..       4      78 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.6e-06
    PF11145.3 281 lrCee.egavrvsvvFravsdseslyladrrtglreatlvAeGvWdastgrlcmvaCrlg 339
                  lr +  ++avrv ++ r+vs++++l     r+++r+      G+W+    r+c  aC+l+
  MMETSP1325-20131115|10194_1   9 LRGQRsNEAVRVQAQVRNVSQQSDLRGERARVATRRRGYARSGSWKRRWKRVC--ACKLS 66 
                  56666689******************9*************************9..78776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 410.15
//
Query:       MMETSP1325-20131115|10193_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-06   25.5   0.8    0.00089   18.5   0.1    4.3  5  PF00612.22 IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.063   12.9   0.4       0.12   12.0   0.0    1.6  2  PF13550.1  Putative phage tail protein
      0.089   12.1   1.1       0.17   11.1   0.3    1.7  2  PF13354.1  Beta-lactamase enzyme family
       0.52    9.9   3.1        1.7    8.2   0.1    2.3  2  PF14185.1  Antitoxin SpoIISB, type II toxin-antitoxin system


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0     2e-05      0.07       2      21 .]      62      81 ..      61      81 .. 0.91
   2 ?   -0.8   0.1      0.44   1.5e+03       1      12 [.      84      95 ..      84      95 .. 0.85
   3 ?   -2.0   0.0       1.1   3.6e+03      12      18 ..     124     130 ..     123     131 .. 0.86
   4 !   18.5   0.1   2.6e-07   0.00089       6      21 .]     173     188 ..     172     188 .. 0.95
   5 ?   -0.4   0.4      0.32   1.1e+03       5      10 ..     198     203 ..     195     210 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2e-05
                 HHHHHHHHHHHHHHHHCHCH CS
   PF00612.22  2 kaaikIQaawRgylaRkryk 21
                 k a+++Q+  +++++R++y+
  MMETSP1325-20131115|10193_1 62 KEACVLQKNMKAWVMRRNYQ 81
                 5699***************7 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.44
                 HHHHHHHHHHHH CS
   PF00612.22  1 rkaaikIQaawR 12
                 r+++ k+Q  wR
  MMETSP1325-20131115|10193_1 84 RDSVRKLQLIWR 95
                 578899**9999 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 1.1
                  HHHHHHC CS
   PF00612.22  12 RgylaRk 18 
                  Rg l Rk
  MMETSP1325-20131115|10193_1 124 RGSLSRK 130
                  999***9 PP

  == domain 4    score: 18.5 bits;  conditional E-value: 2.6e-07
                  HHHHHHHHHHHHCHCH CS
   PF00612.22   6 kIQaawRgylaRkryk 21 
                  k+Qaa+Rg+ aRk++k
  MMETSP1325-20131115|10193_1 173 KLQAAFRGHTARKNFK 188
                  89************98 PP

  == domain 5    score: -0.4 bits;  conditional E-value: 0.32
                  HHHHHH CS
   PF00612.22   5 ikIQaa 10 
                  i+IQ+a
  MMETSP1325-20131115|10193_1 198 IVIQRA 203
                  777776 PP

>> PF13550.1  Putative phage tail protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.6e-05      0.12      34     109 ..      53     130 ..      37     133 .. 0.84
   2 ?   -2.6   0.3       1.1   3.6e+03     105     118 ..     190     203 ..     156     212 .. 0.47

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.6e-05
    PF13550.1  34 garsvytltdddlvdgdd.ge.pleltraaeaelpnevrveyidpandyqaavveardaaeigrrvstvelpgvlsaa 109
                  g++  ++ + + +v  ++  + +++++ ++  + ++++++ + + +n+ + +++e +daae++ ++s +++ g ls++
  MMETSP1325-20131115|10193_1  53 GPDELMDMEKEACVLQKNmKAwVMRRNYQSMRDSVRKLQLIWREKKNSVEEGMEEGEDAAEGEGVSSAIDARGSLSRK 130
                  55666666677777777744578889999999***************************************9999885 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 1.1
    PF13550.1 105 vlsaaqArrlaerl 118
                  +  +++A  + +r+
  MMETSP1325-20131115|10193_1 190 IKQQTLALIVIQRA 203
                  33344444444444 PP

>> PF13354.1  Beta-lactamase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3     5e-05      0.17      68     143 ..      33     100 ..      28     135 .. 0.83
   2 ?   -1.6   0.0      0.39   1.3e+03     171     186 ..     211     227 ..     152     234 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5e-05
                  HHHHHHS----HHHHHHHHS-HHHHHHHHHH----S----S-TT-SGGG-TTTS----HHHHHHHHHHHHGG-... CS
    PF13354.1  68 lelmiavSDNtAtnlLidrlgldavnawlrelglrdtrlrrklpdlealdkdkentttardlakllealyrgells 143
                  ++ +i++SD+   ++ + ++g+d++ ++ +e+      l++++++    +  ++n+ ++rd ++ l+ ++r+++ s
  MMETSP1325-20131115|10193_1  33 VASVITESDKESLDVAMSMMGPDELMDMEKEAC----VLQKNMKA----WVMRRNYQSMRDSVRKLQLIWREKKNS 100
                  6789************************99974....56666543....5678******************97655 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.39
                  EE---.BTTEEEEE-EE CS
    PF13354.1 171 hKtGt.ldgvrhdvGii 186
                  +K G   +++r dvG+ 
  MMETSP1325-20131115|10193_1 211 SKHGAsRNRTRSDVGVA 227
                  34444234555566554 PP

>> PF14185.1  Antitoxin SpoIISB, type II toxin-antitoxin system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.4     0.065   2.2e+02      11      24 ..     177     191 ..     166     197 .. 0.51
   2 ?    8.2   0.1    0.0005       1.7       6      37 ..     206     235 ..     201     236 .. 0.75

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.065
    PF14185.1  11 r.rkanpfkilkkks 24 
                    r + ++k +k+ +
  MMETSP1325-20131115|10193_1 177 AfRGHTARKNFKRIK 191
                  345555666666533 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0005
    PF14185.1   6 qndaerrkanpfkilkkkskvsvAsykvSPyt 37 
                  q +++++++  +   + +s v vAs+  SP+t
  MMETSP1325-20131115|10193_1 206 QRRQQSKHGASRN--RTRSDVGVASFRGSPHT 235
                  5555556666554..789*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       527  (0.0385459); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1135.87
//
Query:       MMETSP1325-20131115|10195_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   13.6   0.0      0.027   13.4   0.0    1.0  1  PF06350.7 Hormone-sensitive lipase (HSL) N-terminus


Domain annotation for each model (and alignments):
>> PF06350.7  Hormone-sensitive lipase (HSL) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0     2e-06     0.027     240     276 ..      14      50 ..      10      56 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2e-06
    PF06350.7 240 WflaesellssLaslvsskvkvnrvltlPaealelpl 276
                  W l+e e l  L s+v ++ k+n+++++P+  l+ ++
  MMETSP1325-20131115|10195_1  14 WTLSEDERLAYLNSVVEVSDKINQLVNVPPLHLSRRR 50 
                  *****************************98887555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.60
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10183_1  [L=2194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.081   11.8   4.3        2.5    6.9   0.0    3.7  4  PF01544.13 CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> PF01544.13  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.6     0.033   4.5e+02     119     179 ..     107     174 ..      93     215 .. 0.61
   2 ?    6.9   0.0   0.00018       2.5     182     243 ..     615     673 ..     586     677 .. 0.83
   3 ?   -1.6   0.0     0.069   9.5e+02     192     228 ..     724     760 ..     705     800 .. 0.78
   4 ?    2.8   0.0    0.0033        46     106     171 ..    1078    1145 ..    1065    1161 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.033
   PF01544.13 119 ivdryfeilekleeeldeledel.edetkkellreilqlr..relvrl....rrallplrdvlkrllr 179
                  ++++ +  +e+l++++d le++l e++ ++    + ++    ++ ++l      +l++++++ +rl +
  MMETSP1325-20131115|10183_1 107 VIEEKDGQIETLKKKVDALEKQLqEQDASRAATGSGAAAAseEDSSTLstqiAEILKSQHEMTQRLES 174
                  55556667888888888888888644444433333333332233444433335555555555544333 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.00018
   PF01544.13 182 dkkllteedkeylrdlldelerllemaealrerlrslqdtylsllsnrlNrimkvLTvvtai 243
                   + ++  ++   lr+l  +le+l +  ++ +e l+   +t++s+    l ++ kvLT  +a+
  MMETSP1325-20131115|10183_1 615 VTGDMANDR---LRNLESDLEKLKQRGKTSKEGLEAAAETINSKFTPVLEKAKKVLTAAAAV 673
                  444444454...*********************************************99998 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.069
   PF01544.13 192 eylrdlldelerllemaealrerlrslqdtylsllsn 228
                   +  +l+ ++++l ++++++  rl s + + +sl+s 
  MMETSP1325-20131115|10183_1 724 AQAHELIVRINKLCDSLDTIEGRLKSWRGAVSSLSSV 760
                  4466777777777777777777777777777777664 PP

  == domain 4    score: 2.8 bits;  conditional E-value: 0.0033
   PF01544.13  106 kspgellyelldeivdryfeilekleeeldeledel..edetkkellreilqlrrelvrlrrallplr 171 
                   +++ ++++  l e++d++ +++ +l +++++  + +  e      ll+e+++l +++v+ +ra +++ 
  MMETSP1325-20131115|10183_1 1078 DDARDFIAGELMEVMDELKANVLALADQVEKKGESVleEVGDAGGLLDELARLAQDAVKAKRAKSDQW 1145
                   5667777777788888888888888888888888888777888999*************999877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1312  (0.0959626); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 3.04u 0.36s 00:00:03.40 Elapsed: 00:00:01.52
# Mc/sec: 3458.95
//
Query:       MMETSP1325-20131115|10198_1  [L=236]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-24   84.2   8.8    6.3e-24   84.0   6.1    1.0  1  PF00999.16 Sodium/hydrogen exchanger family


Domain annotation for each model (and alignments):
>> PF00999.16  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   6.1   4.6e-28   6.3e-24     216     384 .]       6     190 ..       1     190 [. 0.90

  Alignments for each domain:
  == domain 1    score: 84.0 bits;  conditional E-value: 4.6e-28
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXX.XXXXXXXXXX...XXXXXXXXXXXXXXXX.....X..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXHHHHTTXXXX.XXXHHHHXXXHHHHX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF00999.16 216 levllvlllallaallaevlglsgilgaflaGlvls...eyefsnelseklepfgk...flfeplfFvlvGlsldlkvllt..nglsllllvllllvaillgkllgvfllsrll.....glslrealiigflglqrgavalalaalglsl....glisrelfalllavvlltvlvqGltlspllkk 384
                   e+ l+l+ a++++++ae++  sg+l+ +++Gl++s   + + +  +++ +e+f++    ++++++F++ G+ +  + + +   +++ ++l+l+++va+ +++ l  + +s+ll     g+++++ +++g++gl rgav l la ++++     + i ++ ++l+ +++llt+lv+G+t+ ++l+k
  MMETSP1325-20131115|10198_1   6 GEITLTLVAAFGTFIVAEAFETSGVLALVALGLYMSaygRLRIEPAVEHVMEHFWElagYFANTIVFFISGVIVVQRGIVSedIHWDDVGLLLVVYVALHAIRGLMLLCASPLLmrmgyGFDWQTGVALGYGGL-RGAVGLTLAMIVEEDqridSYIRSKAIFLMSGIALLTLLVNGTTVGYVLRK 190
                  6899********************************54433444445555999999*******************66664479***********************************99**************.***************777777777999999****************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.44s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1009.89
//
Query:       MMETSP1325-20131115|10196_1  [L=384]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-14   52.8   0.0      4e-14   52.2   0.0    1.2  1  PF00069.20 Protein kinase domain
    3.1e-05   23.0   0.0    5.1e-05   22.4   0.0    1.2  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.0   5.8e-18     4e-14     152     258 ..      60     188 ..      48     190 .. 0.87

  Alignments for each domain:
  == domain 1    score: 52.2 bits;  conditional E-value: 5.8e-18
                  SS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH......................HHHHHHHHHHT-SSGGGS--HHHHHTSG CS
   PF00069.20 152 seklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks......................eelkdlikkllekdpakRltaeeilkhp 258
                  s  +  ++g+  YmAPE++ ++ + ++++D+WslGv+l+ l+ g++p+++++     ++   + +++    +p  s+++                      + l+dl++ lle dpa+Rl+++ +l+h 
  MMETSP1325-20131115|10196_1  60 SALMAPQTGSMGYMAPELVTGEGQFSAASDTWSLGVVLFGLVAGQMPWDRAHPSCPAYRAFVREGPDSFLASPPCSPRPsaspgvagaaghpttippppfsPALQDLLRGLLEIDPARRLSLNGLLSHT 188
                  55677899*****************************************997777777777777766666666555555799********************************************996 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   7.4e-09   5.1e-05     168     210 ..      69     111 ..      60     132 .. 0.84

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 7.4e-09
                  CGGGS-HHHHH.HSEEEHHHHHHH---HHHHHHTTT-GTTTTSH CS
   PF07714.12 168 pvkWmapEslk.ekkftsksDvWsfGvllwEiftlgespypgls 210
                  ++ +mapE+++ e++f+ +sD Ws Gv+l+ ++  g++p+ + +
  MMETSP1325-20131115|10196_1  69 SMGYMAPELVTgEGQFSAASDTWSLGVVLFGLVA-GQMPWDRAH 111
                  6789****9873678*****************99.999998764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.40s 00:00:01.06 Elapsed: 00:00:00.55
# Mc/sec: 1673.09
//
Query:       MMETSP1325-20131115|10202_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|10199_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-18   64.5   9.6      8e-18   64.5   6.6    1.6  2  PF14240.1 YHYH protein


Domain annotation for each model (and alignments):
>> PF14240.1  YHYH protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   6.6   5.9e-22     8e-18      51     163 ..       6     107 ..       2     109 .. 0.92
   2 ?   -3.8   0.0      0.58   7.9e+03      93     109 ..     178     194 ..     167     204 .. 0.71

  Alignments for each domain:
  == domain 1    score: 64.5 bits;  conditional E-value: 5.9e-22
    PF14240.1  51 eglDecggHvqptgaYHYHgapeclleeaeedsesaliGyaaDGFpIYgekeeegatdassalkklsssgtyvqdyeyvagsgdLDecnGrtgvt...........gtYhYhvtdeypyiircl 163
                   +lD+cggH+     YHYH+   c ++  + +s+s+liG a+DG+ IYg +e+ +++                  + ++ ++ dLD+cnG+t++            + YhYh+t+ +py+i+c+
  MMETSP1325-20131115|10199_1   6 LMLDTCGGHAV---PYHYHNDLACDYDH-TVQSHSPLIGIALDGYGIYGLYESYDEE------------------DGMQVKPHDLDACNGHTKAVpvndtygvdgsSVYHYHTTSWAPYTIGCF 107
                  579*******9...7*********9995.8899*******************99998..................455678*************9****************************8 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 0.58
    PF14240.1  93 DGFpIYgekeeegatda 109
                  DG   Y + +e+++ ++
  MMETSP1325-20131115|10199_1 178 DGCACYNKCDEDNSGCK 194
                  67777777777666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 1064.54
//
Query:       MMETSP1325-20131115|10206_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.071   13.4   0.1       0.09   13.1   0.1    1.2  1  PF05586.6 Anthrax receptor C-terminus region


Domain annotation for each model (and alignments):
>> PF05586.6  Anthrax receptor C-terminus region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   6.5e-06      0.09      15      60 ..      16      63 ..       9      72 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.5e-06
    PF05586.6 15 lekaknavvkipe.eeveeplverkprka.ptkkpqqekWytPikGrl 60
                 le + +  +k +e ee +e+lve+  +++ ++ k++++ Wy Pi  rl
  MMETSP1325-20131115|10206_1 16 LEGPTEEEIKAKEaEERKEALVEKLWEPPsEALKKERREWYEPITDRL 63
                 666666666665524555666666665550556667999*****9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       473  (0.0345963); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 434.34
//
Query:       MMETSP1325-20131115|10207_1  [L=336]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.40s 00:00:01.01 Elapsed: 00:00:00.56
# Mc/sec: 1412.59
//
Query:       MMETSP1325-20131115|10209_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 889.31
//
Query:       MMETSP1325-20131115|10211_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 342.34
//
Query:       MMETSP1325-20131115|10210_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-18   65.8   0.2    5.7e-18   64.6   0.2    1.6  1  PF07039.6 SGF29 tudor-like domain
  ------ inclusion threshold ------
      0.024   14.6   0.1        0.1   12.6   0.0    1.9  2  PF05641.7 Agenet domain


Domain annotation for each model (and alignments):
>> PF07039.6  SGF29 tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.2   8.3e-22   5.7e-18       2     129 ..      39     159 ..      38     160 .. 0.87

  Alignments for each domain:
  == domain 1    score: 64.6 bits;  conditional E-value: 8.3e-22
    PF07039.6   2 kgdkVAakvkkedeeeewilaevvsvekeekryevqDvddeeekktyklsrkkiiplPkklsketsklaefpkgskVLAlYPdTtaFYkAtVvat......pkkkedeykleFeddeeedke...reVkkryVvalp 129
                  +gd+VAak++     +ewila+v +++ ++  y+  D+dd++  kty++s + ++ l           a+ ++g++V A+YPdTt+FY+A+V+++      + +    ++++F dd +e ++   r+++ +yV++ p
  MMETSP1325-20131115|10210_1  39 PGDQVAAKPE-----DEWILARVQEYDINSGFYTLLDEDDQN--KTYHVSESLVVMLEG---------ARLTRGEEVYAIYPDTTSFYPAVVTSAprrsasSANGPIYCTVQFHDDADETGNnpdRQIALQYVIRPP 159
                  7999***877.....9***********************885..9*******9999977.........8999***********************554432223444689********9999999********9865 PP

>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       0.2   1.4e+03      38      49 ..      65      76 ..      46      90 .. 0.60
   2 ?   12.6   0.0   1.5e-05       0.1      18      67 ..     107     163 ..      98     164 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.2
    PF05641.7 38 yddlsledgesk 49
                 + +l++ed+++k
  MMETSP1325-20131115|10210_1 65 FYTLLDEDDQNK 76
                 445555555544 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 1.5e-05
    PF05641.7  18 gaWfrAkVlkelkes........kykveyddlsledgeskllketvdlrr.lRPvpppl 67 
                  ++ ++A V++++++s        +++v++ d  +e+g++  ++  + l   +RP ++p+
  MMETSP1325-20131115|10210_1 107 TSFYPAVVTSAPRRSassangpiYCTVQFHDDADETGNN--PDRQIALQYvIRPPEEPE 163
                  799******************999999997777776665..68888888879**99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 811.83
//
Query:       MMETSP1325-20131115|10214_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.64
# Mc/sec: 307.03
//
Query:       MMETSP1325-20131115|10215_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 332.83
//
Query:       MMETSP1325-20131115|10217_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 300.82
//
Query:       MMETSP1325-20131115|10219_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 343.83
//
Query:       MMETSP1325-20131115|10218_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-18   66.6   0.0    1.4e-18   66.3   0.0    1.0  1  PF01130.16 CD36 family


Domain annotation for each model (and alignments):
>> PF01130.16  CD36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   0.0   1.1e-22   1.4e-18     241     392 ..      22     168 ..       5     176 .. 0.90

  Alignments for each domain:
  == domain 1    score: 66.3 bits;  conditional E-value: 1.1e-22
   PF01130.16 241 weteecnkinGtdGslfpp....flqkkdtlkvFssdlCRslnlkykeevt.vegiktyrfvvpeevfdntkdnpenecfCkkkkkqsaclpkGlldlskCkdgaPiilSlPHFyqadpevleaveGlkPnkeehetfldiepttGtplqakkRlqi 392
                  w++   +++ Gt+G+ f+p    f ++ +++++    + R+l+l+ k++++ + ++k++r+++p++v+ +  + p n  +    +   ++ p+Gl +l++  +   +++S PHF++a   ++ ++ Gl+Pn++ h t+ld+e t+G + + + R q+
  MMETSP1325-20131115|10218_1  22 WDG--TEDVGGTEGDRFKPaswwFGEAWNKVHMLFGPVKRVLPLTKKSSDQkLGSLKLTRYAIPDDVLSSSDSVPHNTIY----D---QFGPDGLANLTYQ-YETDVFVSRPHFLDAASVLQGSLVGLHPNPSLHATYLDVEHTSGLTARSQVRWQM 168
                  555..67999*********7776678899***************99999999****************************....2...399********77.99**********************************************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 860.91
//
Query:       MMETSP1325-20131115|10220_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-25   88.6  13.8    6.2e-10   38.5   0.0    4.6  5  PF13374.1  Tetratricopeptide repeat
    2.1e-24   85.1   6.6    2.1e-12   46.6   0.1    3.3  3  PF13424.1  Tetratricopeptide repeat
      2e-10   39.9   0.3       0.13   12.6   0.0    4.5  4  PF07721.9  Tetratricopeptide repeat
      3e-10   39.0   5.7      0.081   12.7   0.0    4.5  4  PF07719.12 Tetratricopeptide repeat
    3.8e-09   35.5  12.0      0.062   13.0   0.1    5.1  5  PF13176.1  Tetratricopeptide repeat
    1.8e-08   34.1  11.0      0.026   15.0   0.1    4.3  4  PF13428.1  Tetratricopeptide repeat
    1.4e-07   31.9   7.1    3.4e-05   24.2   0.1    3.3  3  PF13432.1  Tetratricopeptide repeat
    5.4e-07   29.0   5.2     0.0018   17.7   0.0    3.5  4  PF13414.1  TPR repeat
    1.3e-05   25.2   4.7       0.21   12.0   0.0    4.1  4  PF13174.1  Tetratricopeptide repeat
    1.9e-05   23.9   7.9       0.42   10.1   0.1    4.7  5  PF00515.23 Tetratricopeptide repeat
    0.00067   19.5   2.8        4.2    7.7   0.0    4.1  4  PF13431.1  Tetratricopeptide repeat
     0.0013   18.5   1.9       0.43   10.4   0.1    3.2  3  PF09543.5  Protein of unknown function (DUF2379)
     0.0038   16.7   4.0        5.9    6.7   0.0    4.4  4  PF13181.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.031   13.9   0.0       0.88    9.3   0.0    2.8  3  PF07720.7  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.1   2.3e-08   2.3e-05       3      39 ..       4      40 ..       3      42 .. 0.94
   2 !   38.5   0.0   6.3e-13   6.2e-10       1      41 [.      44      84 ..      44      85 .. 0.96
   3 !   29.5   0.1   4.3e-10   4.2e-07       1      42 []      86     127 ..      86     127 .. 0.96
   4 ?   -0.5   0.0       1.2   1.2e+03       2      14 ..     129     141 ..     128     145 .. 0.78
   5 ?    2.9   0.9       0.1     1e+02       4      40 ..     138     174 ..     135     176 .. 0.78

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 2.3e-08
    PF13374.1  3 aalnnLAlalrargryeeAlaleeealairrrllGdd 39
                 +a+  L+++ +++g++e+A+  +ee+l +r+++ G++
  MMETSP1325-20131115|10220_1  4 SAMDSLGIVMQNQGDLEAARTTYEETLRLREAVWGAE 40
                 6999*****************************9975 PP

  == domain 2    score: 38.5 bits;  conditional E-value: 6.3e-13
    PF13374.1  1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41
                 t+ +  nLA++ r++g+ + A++l+e++l + ++ lG++HP
  MMETSP1325-20131115|10220_1 44 TLVSKGNLAIVMRRQGDNDSARDLYEAVLRVEEATLGAEHP 84
                 677889**********************************9 PP

  == domain 3    score: 29.5 bits;  conditional E-value: 4.3e-10
    PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                  t+ +  nLA++l ++g++  Al+l e++l  ++  lG+dHP+
  MMETSP1325-20131115|10220_1  86 TLLTKGNLANVLKEQGDLKGALELNEAVLQGHEMQLGADHPH 127
                  678999***********************************6 PP

  == domain 4    score: -0.5 bits;  conditional E-value: 1.2
    PF13374.1   2 aaalnnLAlalra 14 
                  + +  nL+ ++ +
  MMETSP1325-20131115|10220_1 129 LITKGNLGATYGQ 141
                  55778***99976 PP

  == domain 5    score: 2.9 bits;  conditional E-value: 0.1
    PF13374.1   4 alnnLAlalrargryeeAlaleeealairrrllGddH 40 
                  ++  LA      g++ eA al+ +a+++  + +G dH
  MMETSP1325-20131115|10220_1 138 TYGQLAEEAKSNGERTEAAALYLRAADLIGAGFGKDH 174
                  5566666667789999999999999998888888888 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.1   2.1e-15   2.1e-12       6      77 ..       4      76 ..       1      77 [. 0.94
   2 !   32.8   0.1   4.4e-11   4.3e-08       1      61 [.      83     144 ..      83     148 .. 0.89
   3 !   10.5   0.8   0.00042      0.41       7      48 ..     138     180 ..     137     190 .] 0.85

  Alignments for each domain:
  == domain 1    score: 46.6 bits;  conditional E-value: 2.1e-15
    PF13424.1  6 tilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77
                 ++++ l+ v + +gd++ A++ ye+ l l  ++ g ++  t+++  nla++ +++gd+d+A++++e +l++ e
  MMETSP1325-20131115|10220_1  4 SAMDSLGIVMQNQGDLEAARTTYEETLRLrEAVWGAEDESTLVSKGNLAIVMRRQGDNDSARDLYEAVLRVEE 76
                 57899************************88889**********************************99876 PP

  == domain 2    score: 32.8 bits;  conditional E-value: 4.4e-11
    PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgd 61 
                  hp++  +  nla+vl+++gd++ Alel e +l+    +lg dhp ++ +  nl+ +y +l +
  MMETSP1325-20131115|10220_1  83 HPSTLLTKGNLANVLKEQGDLKGALELNEAVLQGhEMQLGADHPHVLITKGNLGATYGQLAE 144
                  566666778*************************87799******************99865 PP

  == domain 3    score: 10.5 bits;  conditional E-value: 0.00042
    PF13424.1   7 ilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtara 48 
                  ++ +la+  +  g+  eA +ly +a +l  + +g dh  +a +
  MMETSP1325-20131115|10220_1 138 TYGQLAEEAKSNGERTEAAALYLRAADLiGAGFGKDHEAVAYC 180
                  678899888999****************9999*****988865 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00014      0.13       6      26 .]       8      28 ..       3      28 .. 0.88
   2 !   12.4   0.0   0.00015      0.15       5      25 ..      49      69 ..      45      70 .. 0.90
   3 !    8.4   0.0    0.0031         3       5      23 ..      91     109 ..      87     111 .. 0.90
   4 ?    0.9   0.3       0.8   7.8e+02       1      12 [.     155     166 ..     137     169 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00014
                 --HHHHHH-------HHHHHT CS
    PF07721.9  6 aLArallalGdldeAraller 26
                  L+ +++ +Gdl++Ar++ e+
  MMETSP1325-20131115|10220_1  8 SLGIVMQNQGDLEAARTTYEE 28
                 5999*************9986 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 0.00015
                 ---HHHHHH-------HHHHH CS
    PF07721.9  5 laLArallalGdldeAralle 25
                  +LA ++ ++Gd d Ar+l e
  MMETSP1325-20131115|10220_1 49 GNLAIVMRRQGDNDSARDLYE 69
                 69****************998 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.0031
                  ---HHHHHH-------HHH CS
    PF07721.9   5 laLArallalGdldeAral 23 
                   +LA +l ++Gdl  A++l
  MMETSP1325-20131115|10220_1  91 GNLANVLKEQGDLKGALEL 109
                  69**************986 PP

  == domain 4    score: 0.9 bits;  conditional E-value: 0.8
                  HHHH---HHHHH CS
    PF07721.9   1 arallaLArall 12 
                  a+al+++A  l 
  MMETSP1325-20131115|10220_1 155 AAALYLRAADLI 166
                  456666666665 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   9.7e-05     0.095       6      31 ..       8      33 ..       4      35 .. 0.90
   2 !   12.7   0.0   8.3e-05     0.081       6      30 ..      50      74 ..      48      77 .. 0.92
   3 !    6.9   0.0    0.0061         6       6      23 ..      92     109 ..      89     115 .. 0.90
   4 ?    6.2   0.6      0.01        10       4      30 ..     139     165 ..     136     166 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9.7e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHH- CS
   PF07719.12  6 nlGlayyklgdyeeAleafekAleld 31
                  lG +  ++gd+e A+  +e+ l+l 
  MMETSP1325-20131115|10220_1  8 SLGIVMQNQGDLEAARTTYEETLRLR 33
                 699*******************9985 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 8.3e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF07719.12  6 nlGlayyklgdyeeAleafekAlel 30
                 nl+ + +++gd + A++++e +l+ 
  MMETSP1325-20131115|10220_1 50 NLAIVMRRQGDNDSARDLYEAVLRV 74
                 89*******************9985 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0061
                  HHHHHHHHTT-HHHHHHH CS
   PF07719.12   6 nlGlayyklgdyeeAlea 23 
                  nl++++ ++gd++ Ale+
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGALEL 109
                  89*************986 PP

  == domain 4    score: 6.2 bits;  conditional E-value: 0.01
                  HHHHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF07719.12   4 lynlGlayyklgdyeeAleafekAlel 30 
                  + +l++ +  +g+  eA++++ +A  l
  MMETSP1325-20131115|10220_1 139 YGQLAEEAKSNGERTEAAALYLRAADL 165
                  6679999999**************876 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0022       2.2      10      29 ..      14      33 ..       5      42 .. 0.80
   2 !   13.0   0.1   6.3e-05     0.062       4      34 ..      50      80 ..      49      82 .. 0.82
   3 !   12.3   0.0    0.0001       0.1       4      32 ..      92     120 ..      91     124 .. 0.87
   4 ?    5.5   0.3     0.016        15       2      25 ..     139     162 ..     134     166 .. 0.82
   5 ?    1.2   0.0      0.38   3.7e+02      13      28 ..     171     187 ..     169     190 .] 0.80

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0022
    PF13176.1 10 srlgdyekAielyeraLalt 29
                 +++gd e A + ye+ L+l+
  MMETSP1325-20131115|10220_1 14 QNQGDLEAARTTYEETLRLR 33
                 78*************77766 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 6.3e-05
    PF13176.1  4 nLarlysrlgdyekAielyeraLaltkdpld 34
                 nLa + +r+gd + A +lye+ L+++++ l+
  MMETSP1325-20131115|10220_1 50 NLAIVMRRQGDNDSARDLYEAVLRVEEATLG 80
                 7777779**************8887777665 PP

  == domain 3    score: 12.3 bits;  conditional E-value: 0.0001
    PF13176.1   4 nLarlysrlgdyekAielyeraLaltkdp 32 
                  nLa++  ++gd + A+el+e+ L+ ++ +
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGALELNEAVLQGHEMQ 120
                  9********************99877655 PP

  == domain 4    score: 5.5 bits;  conditional E-value: 0.016
    PF13176.1   2 llnLarlysrlgdyekAielyera 25 
                  + +La+   + g++ +A+ ly ra
  MMETSP1325-20131115|10220_1 139 YGQLAEEAKSNGERTEAAALYLRA 162
                  66777777889**********994 PP

  == domain 5    score: 1.2 bits;  conditional E-value: 0.38
    PF13176.1  13 gdyekAielyeraL.al 28 
                  g+  +A+ +++++  +l
  MMETSP1325-20131115|10220_1 171 GKDHEAVAYCKAQAsEL 187
                  67789*****9977665 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0038       3.7       6      31 ..       8      33 ..       4      40 .. 0.86
   2 !   15.0   0.1   2.7e-05     0.026       6      30 ..      50      74 ..      48      86 .. 0.88
   3 !    7.2   0.0    0.0083       8.1       6      29 ..      92     115 ..      87     129 .. 0.84
   4 !    8.2   0.6     0.004       3.9       2      30 ..     137     165 ..     136     184 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0038
    PF13428.1  6 alarallalGdpdeAiallrralala 31
                  l++++ ++Gd+++A+  +++ l+l 
  MMETSP1325-20131115|10220_1  8 SLGIVMQNQGDLEAARTTYEETLRLR 33
                 5899****************999865 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 2.7e-05
    PF13428.1  6 alarallalGdpdeAiallrralal 30
                  la++++++Gd d A++l++++l+ 
  MMETSP1325-20131115|10220_1 50 NLAIVMRRQGDNDSARDLYEAVLRV 74
                 59********************985 PP

  == domain 3    score: 7.2 bits;  conditional E-value: 0.0083
    PF13428.1   6 alarallalGdpdeAiallrrala 29 
                   la++l ++Gd+++A++l +++l+
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGALELNEAVLQ 115
                  69***************8777776 PP

  == domain 4    score: 8.2 bits;  conditional E-value: 0.004
    PF13428.1   2 eallalarallalGdpdeAiallrralal 30 
                  +++ +la+    +G+  eA+al+ ra+ l
  MMETSP1325-20131115|10220_1 137 ATYGQLAEEAKSNGERTEAAALYLRAADL 165
                  57899*****************9999764 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.018        18       9      26 ..      15      32 ..       3      40 .. 0.68
   2 !   24.2   0.1   3.5e-08   3.4e-05       4      59 ..      52     115 ..      50     126 .. 0.91
   3 ?    3.5   0.8      0.11     1e+02       3      24 ..     142     163 ..     140     166 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.018
    PF13432.1  9 raGdydeAlaaleaalal 26
                 ++Gd+++A+  +e+ l+l
  MMETSP1325-20131115|10220_1 15 NQGDLEAARTTYEETLRL 32
                 566666666666666654 PP

  == domain 2    score: 24.2 bits;  conditional E-value: 3.5e-08
    PF13432.1   4 ArallraGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraala 59 
                  A    r+Gd d A++++ea+l+ +        P     + +la +l ++g+l++A++l +a l+
  MMETSP1325-20131115|10220_1  52 AIVMRRQGDNDSARDLYEAVLRVEeatlgaehPSTLLTKGNLANVLKEQGDLKGALELNEAVLQ 115
                  556679******************************************************9984 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.11
    PF13432.1   3 lArallraGdydeAlaaleaal 24 
                  lA+++  +G+  eA+a++ +a 
  MMETSP1325-20131115|10220_1 142 LAEEAKSNGERTEAAALYLRAA 163
                  6777778888888888887765 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.9e-06    0.0018       8      67 ..       8      74 ..       4      76 .. 0.83
   2 !   12.8   0.1   6.3e-05     0.062       8      65 ..      50     114 ..      43     123 .. 0.82
   3 !    5.9   1.7    0.0089       8.7       8      52 ..      92     144 ..      85     163 .. 0.64
   4 ?    5.5   1.0     0.012        12       5      33 ..     138     166 ..     134     187 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.9e-06
    PF13414.1  8 elGnalfkegdydeAieayekAlel........dpnnaelyynlAlaylklgkdyeeAledyekAlel 67
                  lG +  ++gd++ A   ye+ l+l        d+++ +   nlA + +++g++ ++A++ ye +l+ 
  MMETSP1325-20131115|10220_1  8 SLGIVMQNQGDLEAARTTYEETLRLreavwgaeDESTLVSKGNLAIVMRRQGDN-DSARDLYEAVLRV 74
                 589999*******************444444434556669999*********75.9*******99986 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 6.3e-05
    PF13414.1   8 elGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAledyekAl 65 
                  +l+ +  ++gd d A ++ye  l+ +        p++     nlA ++ ++g d + Ale  e +l
  MMETSP1325-20131115|10220_1  50 NLAIVMRRQGDNDSARDLYEAVLRVEeatlgaehPSTLLTKGNLANVLKEQG-DLKGALELNEAVL 114
                  67888999***************9864455544465666999**********.6899999777666 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.0089
    PF13414.1   8 elGnalfkegdydeAieayekAle.....ldpnnae...lyynlAlaylklgk 52 
                  +l+n+l ++gd+++A+e+ e  l+     l  +++       nl+++y +l +
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGALELNEAVLQghemqLGADHPHvliTKGNLGATYGQLAE 144
                  78999999999999999988888644444444444434466777777777742 PP

  == domain 4    score: 5.5 bits;  conditional E-value: 0.012
    PF13414.1   5 alkelGnalfkegdydeAieayekAleld 33 
                  ++ +l++++ ++g+  eA ++y +A +l 
  MMETSP1325-20131115|10220_1 138 TYGQLAEEAKSNGERTEAAALYLRAADLI 166
                  5778999999***************9983 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00078      0.76       2      26 ..       5      29 ..       4      32 .. 0.87
   2 !   12.0   0.0   0.00021      0.21       5      28 ..      50      73 ..      50      74 .. 0.93
   3 ?    1.3   0.0      0.54   5.2e+02       5      22 ..      92     109 ..      92     115 .. 0.86
   4 ?   -0.1   0.2       1.5   1.4e+03      13      24 ..     146     160 ..     135     165 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00078
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1  2 AlyklalsyyklgdtdeAlealerl 26
                 A+  l+ +++++gd ++A++++e+ 
  MMETSP1325-20131115|10220_1  5 AMDSLGIVMQNQGDLEAARTTYEET 29
                 6777999***************986 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00021
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1  5 klalsyyklgdtdeAlealerlik 28
                 +la +++++gd d A++++e +++
  MMETSP1325-20131115|10220_1 50 NLAIVMRRQGDNDSARDLYEAVLR 73
                 6899****************9985 PP

  == domain 3    score: 1.3 bits;  conditional E-value: 0.54
                  HHHHHHHHHHHHHHHHHH CS
    PF13174.1   5 klalsyyklgdtdeAlea 22 
                  +la +++++gd   Ale+
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGALEL 109
                  6899999999***99985 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 1.5
                  H...HHHHHHHHHHH CS
    PF13174.1  13 l...gdtdeAleale 24 
                  +   g+ +eA +++ 
  MMETSP1325-20131115|10220_1 146 AksnGERTEAAALYL 160
                  234466677777664 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0071       6.9      11      31 ..      13      33 ..       8      35 .. 0.85
   2 ?    5.4   0.0     0.014        13       6      30 ..      50      74 ..      47      76 .. 0.87
   3 !   10.1   0.1   0.00043      0.42       6      28 ..      92     114 ..      89     115 .. 0.87
   4 ?    3.0   0.5     0.079        78       3      29 ..     138     164 ..     136     166 .. 0.89
   5 ?   -2.1   0.1       3.1     3e+03      18      25 ..     174     181 ..     171     182 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0071
                 HHHTT-HHHHHHHHHHHHHHH CS
   PF00515.23 11 ylklgkydeAleyyekALeln 31
                  +++g+++ A   ye+ L+l+
  MMETSP1325-20131115|10220_1 13 MQNQGDLEAARTTYEETLRLR 33
                 579**************9996 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.014
                 HHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF00515.23  6 nlGnaylklgkydeAleyyekALel 30
                 nl+ + +++g+ d A + ye +L++
  MMETSP1325-20131115|10220_1 50 NLAIVMRRQGDNDSARDLYEAVLRV 74
                 77777889*************9987 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 0.00043
                  HHHHHHHHTT-HHHHHHHHHHHH CS
   PF00515.23   6 nlGnaylklgkydeAleyyekAL 28 
                  nl+n++ ++g+++ Ale  e +L
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGALELNEAVL 114
                  9***************9877666 PP

  == domain 4    score: 3.0 bits;  conditional E-value: 0.079
                  HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
   PF00515.23   3 alynlGnaylklgkydeAleyyekALe 29 
                  ++ +l+    ++g+  eA + y +A  
  MMETSP1325-20131115|10220_1 138 TYGQLAEEAKSNGERTEAAALYLRAAD 164
                  68999999**************99965 PP

  == domain 5    score: -2.1 bits;  conditional E-value: 3.1
                  HHHHHHHH CS
   PF00515.23  18 deAleyye 25 
                   eA++y++
  MMETSP1325-20131115|10220_1 174 HEAVAYCK 181
                  58999987 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.018        17      17      33 ..       7      23 ..       4      24 .. 0.87
   2 ?    3.4   0.0     0.097        95      18      33 ..      50      65 ..      48      66 .. 0.93
   3 !    7.7   0.0    0.0043       4.2      18      33 ..      92     107 ..      85     108 .. 0.92
   4 ?   -1.5   0.1       3.8   3.7e+03      16      28 ..     139     151 ..     133     157 .. 0.51

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.018
    PF13431.1 17 nnLAelllnnGdleeAe 33
                   L+ + +n+Gdle A+
  MMETSP1325-20131115|10220_1  7 DSLGIVMQNQGDLEAAR 23
                 579************98 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.097
    PF13431.1 18 nLAelllnnGdleeAe 33
                 nLA +  ++Gd + A+
  MMETSP1325-20131115|10220_1 50 NLAIVMRRQGDNDSAR 65
                 9***********9997 PP

  == domain 3    score: 7.7 bits;  conditional E-value: 0.0043
    PF13431.1  18 nLAelllnnGdleeAe 33 
                  nLA++l+++Gdl+ A+
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGAL 107
                  9************997 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 3.8
    PF13431.1  16 ynnLAelllnnGd 28 
                  y +LAe  ++nG+
  MMETSP1325-20131115|10220_1 139 YGQLAEEAKSNGE 151
                  5556654445554 PP

>> PF09543.5  Protein of unknown function (DUF2379)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.023        23      85     103 ..      13      31 ..       2      37 .. 0.84
   2 !   10.4   0.1   0.00044      0.43      82     106 ..      52      76 ..      32      93 .. 0.86
   3 ?    1.4   0.0      0.26   2.6e+02      83     102 ..      95     114 ..      82     119 .. 0.82

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.023
    PF09543.5  85 lrdagDldgArqelrevLa 103
                  ++++gDl++Ar   +e L 
  MMETSP1325-20131115|10220_1  13 MQNQGDLEAARTTYEETLR 31 
                  699**********999985 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00044
    PF09543.5  82 alrlrdagDldgArqelrevLavEv 106
                  a+ +r++gD d+Ar   + vL vE 
  MMETSP1325-20131115|10220_1  52 AIVMRRQGDNDSARDLYEAVLRVEE 76 
                  667899*****************97 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.26
    PF09543.5  83 lrlrdagDldgArqelrevL 102
                    l+++gDl gA +  + vL
  MMETSP1325-20131115|10220_1  95 NVLKEQGDLKGALELNEAVL 114
                  56899*******98877777 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0061       5.9       7      30 ..       9      32 ..       7      35 .. 0.89
   2 ?    5.1   0.0      0.02        20       6      29 ..      50      73 ..      49      78 .. 0.89
   3 ?    0.2   0.0      0.74   7.3e+02       6      22 ..      92     108 ..      90     114 .. 0.85
   4 ?    1.8   0.1      0.23   2.2e+02       3      29 ..     138     164 ..     133     166 .. 0.74

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0061
                 ---HHHHTT-HHHHHHHHH---HH CS
    PF13181.1  7 lGdiYrqlGdydkAkeylekalel 30
                 lG ++ + Gd ++A   +e+ l l
  MMETSP1325-20131115|10220_1  9 LGIVMQNQGDLEAARTTYEETLRL 32
                 7888999*************9987 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.02
                 T---HHHHTT-HHHHHHHHH---H CS
    PF13181.1  6 nlGdiYrqlGdydkAkeylekale 29
                 nl+ ++r  Gd d+A   +e +l 
  MMETSP1325-20131115|10220_1 50 NLAIVMRRQGDNDSARDLYEAVLR 73
                 788999**************9986 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 0.74
                  T---HHHHTT-HHHHHH CS
    PF13181.1   6 nlGdiYrqlGdydkAke 22 
                  nl+ ++++ Gd + A+e
  MMETSP1325-20131115|10220_1  92 NLANVLKEQGDLKGALE 108
                  78999999999988876 PP

  == domain 4    score: 1.8 bits;  conditional E-value: 0.23
                  -TTT---HHHHTT-HHHHHHHHH---H CS
    PF13181.1   3 ayynlGdiYrqlGdydkAkeylekale 29 
                  +y +l++  +++G+  +A + + +a +
  MMETSP1325-20131115|10220_1 138 TYGQLAEEAKSNGERTEAAALYLRAAD 164
                  566777888888888888888877766 PP

>> PF07720.7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0    0.0009      0.88       6      26 ..       8      26 ..       8      30 .. 0.90
   2 ?    0.9   0.0      0.37   3.7e+02      14      25 ..      58      69 ..      57      73 .. 0.79
   3 ?   -2.6   0.0       4.8   4.7e+03      14      23 ..     100     109 ..      99     109 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0009
                 HHHHHHHHTT-HHHHHHH..H CS
    PF07720.7  6 slAaefynkkkyqeArelfsY 26
                 sl+ + +n+++++ Ar +  Y
  MMETSP1325-20131115|10220_1  8 SLGIVMQNQGDLEAARTT--Y 26
                 689999************..6 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.37
                 TT-HHHHHHH.. CS
    PF07720.7 14 kkkyqeArelfs 25
                 +++ + Ar+l+ 
  MMETSP1325-20131115|10220_1 58 QGDNDSARDLYE 69
                 678899****54 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 4.8
                  TT-HHHHHHH CS
    PF07720.7  14 kkkyqeArel 23 
                  ++++  A+el
  MMETSP1325-20131115|10220_1 100 QGDLKGALEL 109
                  899999*998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 875.59
//
Query:       MMETSP1325-20131115|10222_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 948.12
//
Query:       MMETSP1325-20131115|10225_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-17   61.7   4.5    3.4e-17   61.7   3.1    2.1  2  PF04117.7 Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> PF04117.7  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.3     0.021   2.8e+02      20      35 ..      16      31 ..       4      35 .. 0.83
   2 !   61.7   3.1   2.5e-21   3.4e-17       1      64 [.      39     102 ..      39     104 .. 0.98

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.021
    PF04117.7 20 flptlkanwmvWpavq 35
                  ++t++  +++W +++
  MMETSP1325-20131115|10225_1 16 VFKTIMEQFVYWSWFS 31
                 5789999999998876 PP

  == domain 2    score: 61.7 bits;  conditional E-value: 2.5e-21
    PF04117.7   1 msllegksleeikeklkekflptlkanwmvWpavqlinFafvPlhyrvlfvnlvslgWntyLSl 64 
                  m+ ++g +le +  +l +  ++t+ka w +W++vqlinF+f P+++++ +v + s++W+++LS+
  MMETSP1325-20131115|10225_1  39 MGAMQGYTLEMVSTRLNDVLWDTMKAQWAFWIPVQLINFKFTPVRHQLNVVLVTSVVWTAFLSF 102
                  899************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       385  (0.0281597); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 542.85
//
Query:       MMETSP1325-20131115|10223_1  [L=411]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-07   30.0   1.4    1.3e-05   25.1   0.9    2.7  2  PF09333.6 ATG C terminal domain


Domain annotation for each model (and alignments):
>> PF09333.6  ATG C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.017   2.3e+02      72      86 ..      62      76 ..      16     114 .. 0.59
   2 !   25.1   0.9   9.5e-10   1.3e-05      13      82 ..     145     214 ..      45     221 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.017
    PF09333.6 72 eavsktlgGvrnqld 86
                 +av++ l G+   ++
  MMETSP1325-20131115|10223_1 62 DAVAEPLEGLVRTVE 76
                 333333333322222 PP

  == domain 2    score: 25.1 bits;  conditional E-value: 9.5e-10
    PF09333.6  13 lreGlakAysslreglkdtaqtllavasevheqkglqgavgavlkaiPiavvrPligateavsktlgGvr 82 
                  +  Gl  A  ++  g+ d  + l++++ ++ ++ gl g ++++ k ++  vv+P++g+++a + +l+G++
  MMETSP1325-20131115|10223_1 145 VFGGLGAAGGTVLGGMADGIKGLVDAPVKGAQSGGLIGGIKGAGKGMVGFVVKPVVGISDAATDVLQGIK 214
                  55678888888888******************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1758.75
//
Query:       MMETSP1325-20131115|10226_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 259.20
//
Query:       MMETSP1325-20131115|10227_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|10228_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 660.33
//
Query:       MMETSP1325-20131115|10229_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 275.33
//
Query:       MMETSP1325-20131115|10230_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 534.90
//
Query:       MMETSP1325-20131115|10231_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.67
# Mc/sec: 160.95
//
Query:       MMETSP1325-20131115|10233_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   14.7   1.8      0.038   13.9   1.3    1.3  1  PF04380.8  Membrane fusogenic activity
      0.026   14.2   1.7       0.47   10.2   0.4    2.1  2  PF02627.15 Carboxymuconolactone decarboxylase family
      0.034   13.6   0.3      0.048   13.1   0.2    1.2  1  PF12761.2  Actin cytoskeleton-regulatory complex protein END3
      0.058   12.7   0.8      0.065   12.5   0.6    1.1  1  PF09989.4  CoA enzyme activase uncharacterised domain (DUF2229)
       0.46   10.3   4.8        1.9    8.3   0.1    2.5  3  PF05589.6  Protein of unknown function (DUF768)
       0.83    9.8   5.6        1.2    9.3   3.8    1.4  1  PF03726.9  Polyribonucleotide nucleotidyltransferase, RNA binding domain


Domain annotation for each model (and alignments):
>> PF04380.8  Membrane fusogenic activity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   1.3   1.7e-05     0.038      48      79 .]      61      92 ..      61      92 .. 0.96

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.7e-05
    PF04380.8 48 tReEFdvqrevlartRekleaLearvaeLeak 79
                 t+eE ++    + +t+e++++ +++v++L a+
  MMETSP1325-20131115|10233_1 61 TKEEIEAAARAAGKTQEEIDTVKKQVEQLMAQ 92
                 79***************************986 PP

>> PF02627.15  Carboxymuconolactone decarboxylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.4   0.00021      0.47      48      66 ..      53      71 ..      51      72 .. 0.88
   2 ?    7.1   0.2    0.0019       4.3      48      63 ..      67      82 ..      66      92 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00021
                 HHHHHTT--HHHHHHHHHH CS
   PF02627.15 48 raalkaGvteeeiaealaq 66
                  aal++G+t+eei +a++ 
  MMETSP1325-20131115|10233_1 53 TAALNQGKTKEEIEAAARA 71
                 689***********99886 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0019
                 HHHHHTT--HHHHHHH CS
   PF02627.15 48 raalkaGvteeeiaea 63
                 +aa+ aG+t+eei+++
  MMETSP1325-20131115|10233_1 67 AAARAAGKTQEEIDTV 82
                 689**********987 PP

>> PF12761.2  Actin cytoskeleton-regulatory complex protein END3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   2.1e-05     0.048      86     142 ..      28      91 ..      15     107 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.1e-05
    PF12761.2  86 tdfsatqdtdwEevrLrreLaeLeeklekvqkesekr........kkksknesalvkkeleqLLk 142
                   +f + ++td E v L ++L+ L++  +++++ ++k+        + k+++e   vkk++eqL+ 
  MMETSP1325-20131115|10233_1  28 FNFVNETGTDDEPVYLMKDLS-LDAVTAALNQGKTKEeieaaaraAGKTQEEIDTVKKQVEQLMA 91 
                  5788999***********995.777777776666655677888777788889999*******985 PP

>> PF09989.4  CoA enzyme activase uncharacterised domain (DUF2229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.6   2.8e-05     0.065     138     183 ..      56      98 ..      29     104 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.8e-05
    PF09989.4 138 lgkklgiskeeikkAvekAleeqeefkedlkkkgeealelleeegk 183
                  l  + g++keei++A+++A ++qee++ ++kk++e+++++  eeg+
  MMETSP1325-20131115|10233_1  56 L--NQGKTKEEIEAAARAAGKTQEEID-TVKKQVEQLMAQGIEEGD 98 
                  3..3489******************96.599999999988777665 PP

>> PF05589.6  Protein of unknown function (DUF768)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1   0.00084       1.9      16      50 ..      30      66 ..      28      68 .. 0.90
   2 ?    5.2   0.3     0.008        18      35      61 ..      65      91 ..      63      95 .. 0.82
   3 ?   -0.1   0.1      0.34   7.8e+02      41      53 ..      91     103 ..      83     106 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00084
    PF05589.6 16 nvpettkaD..visiaeltekliadAkalGikskeid 50
                  v et + D  v ++++l  +++ +A  +G  ++ei+
  MMETSP1325-20131115|10233_1 30 FVNETGTDDepVYLMKDLSLDAVTAALNQGKTKEEIE 66
                 57789899998899*********************98 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.008
    PF05589.6 35 liadAkalGikskeideevssvyevil 61
                 + a+A+a+G  ++eid   ++v + + 
  MMETSP1325-20131115|10233_1 65 IEAAARAAGKTQEEIDTVKKQVEQLMA 91
                 679*************98888877765 PP

  == domain 3    score: -0.1 bits;  conditional E-value: 0.34
    PF05589.6  41 alGikskeideev 53 
                  a+Gi+  + +ee 
  MMETSP1325-20131115|10233_1  91 AQGIEEGDEEEEE 103
                  8999998887775 PP

>> PF03726.9  Polyribonucleotide nucleotidyltransferase, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.8   0.00053       1.2      11      55 ..      62     104 ..      49     107 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00053
    PF03726.9  11 eeelsealtiteKqeRyaaldeikakvveafaaeleeedeedeke 55 
                  +ee+++a +  +K +  +++d +k++v + +a+ +ee dee+e+e
  MMETSP1325-20131115|10233_1  62 KEEIEAAARAAGKTQ--EEIDTVKKQVEQLMAQGIEEGDEEEEEE 104
                  689999999999985..99******************99988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1405  (0.102765); expected 273.4 (0.02)
Passed bias filter:                      921  (0.067364); expected 273.4 (0.02)
Passed Vit filter:                       124  (0.00906963); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.41s 00:00:00.89 Elapsed: 00:00:00.62
# Mc/sec: 417.43
//
Query:       MMETSP1325-20131115|10235_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-06   26.7   0.0    2.9e-06   26.5   0.0    1.2  1  PF00069.20 Protein kinase domain
    0.00031   19.8   0.0    0.00031   19.8   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
    0.00066   19.3   0.4     0.0012   18.5   0.0    1.5  2  PF01636.18 Phosphotransferase enzyme family
     0.0028   16.6   0.0     0.0042   16.0   0.0    1.2  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   8.5e-10   2.9e-06     103     148 ..       9      57 ..       2      83 .. 0.83

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 8.5e-10
                  HHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--E...EE------EEE CS
   PF00069.20 103 ialqilegleylHsngiiHrDLKpeNiLldkkgel...kiaDFGlakkl 148
                  +a +++ +l+y H +++ H D+  +N+L++ +g      + DFG a  +
  MMETSP1325-20131115|10235_1   9 VAAELAAALAYTHAHHVSHGDVYAHNVLVNWSGGHpltTLYDFGAAFFY 57 
                  67899*************************55554488*******9653 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   9.2e-08   0.00031     104     148 ..       5      52 ..       1      94 [. 0.85

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 9.2e-08
                  HHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET...TTEEEE---- CS
   PF07714.12 104 dllkfalqiakGmeyLeskklvHrdLaarNvLlee...ekvvkisDfG 148
                   ll +a+++a +++y +++++ H d+ a NvL++    +    + DfG
  MMETSP1325-20131115|10235_1   5 FLLGVAAELAAALAYTHAHHVSHGDVYAHNVLVNWsggHPLTTLYDFG 52 
                  57899****************************964434466777777 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   3.4e-07    0.0012     149     197 ..       6      56 ..       2      61 .. 0.87
   2 ?   -1.7   0.1      0.51   1.8e+03     111     111 ..      85      85 ..      62     104 .. 0.46

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 3.4e-07
                  HHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEE.TTTTEE.EE---TT-BB CS
   PF01636.18 149 eervlaalaallpgaeppvllHgDlhpgNllvd.pddgrv.gviDfedagl 197
                     v+a+laa+l    ++ + HgD   +N+lv+ +++ ++  + Df+ a +
  MMETSP1325-20131115|10235_1   6 LLGVAAELAAALAYTHAHHVSHGDVYAHNVLVNwSGGHPLtTLYDFGAAFF 56 
                  55688888888888899*****************************98876 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.51
                  T CS
   PF01636.18 111 a 111
                  a
  MMETSP1325-20131115|10235_1  85 A 85 
                  2 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.2e-06    0.0042     127     165 ..      13      51 ..       8      57 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.2e-06
    PF06293.9 127 vGrliakmhragvnHtdlnahnilldeeeekakvwliDl 165
                  ++++ a  h+ +v H+d +ahn+l++  +++    l D+
  MMETSP1325-20131115|10235_1  13 LAAALAYTHAHHVSHGDVYAHNVLVNWSGGHPLTTLYDF 51 
                  67888899*****************99998888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 512.82
//
Query:       MMETSP1325-20131115|10236_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00027   19.0   2.8    0.00027   19.0   1.9    1.1  1  PF02724.9  CDC45-like protein
     0.0011   18.2   7.9     0.0015   17.8   5.5    1.2  1  PF07423.6  Protein of unknown function (DUF1510)
  ------ inclusion threshold ------
      0.082   10.8   8.3      0.095   10.6   5.8    1.2  1  PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
       0.11   10.9   3.1       0.14   10.6   2.1    1.1  1  PF11711.3  Inner membrane protein import complex subunit Tim54
       0.12   10.1  21.5       0.14    9.9  14.9    1.0  1  PF04147.7  Nop14-like family
       0.27   10.9   6.4        0.4   10.3   4.5    1.2  1  PF07543.7  Protein trafficking PGA2
       0.59    9.0  22.1        0.7    8.7  15.3    1.0  1  PF09073.5  BUD22
        2.4    6.4  21.0        3.3    5.9  14.6    1.2  1  PF03344.10 Daxx Family
        2.7    6.1   9.9        3.8    5.6   6.8    1.3  1  PF00183.13 Hsp90 protein
        3.3    5.2  12.7        3.8    5.0   8.8    1.0  1  PF09421.5  Frequency clock protein
        3.4    5.2   7.0          5    4.7   4.9    1.2  1  PF11696.3  Protein of unknown function (DUF3292)
        3.7    5.6  22.9        4.6    5.3  15.9    1.0  1  PF04006.7  Mpp10 protein
        5.5    5.7  16.6        8.4    5.1  11.5    1.2  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit


Domain annotation for each model (and alignments):
>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   1.9   2.5e-07   0.00027     133     177 ..     103     147 ..      21     175 .. 0.61

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 2.5e-07
    PF02724.9 133 eesdedsdseddeeeeessasekrksesdedeeddddeededeeq 177
                  +++de++++e++eee  ++a ++  +++d+d+e+dddee+e+ee 
  MMETSP1325-20131115|10236_1 103 DDDDEEEEEEKEEEEIGADAADDAAADDDDDDEGDDDEEEEEEED 147
                  111111112222222222222222222222222222222222222 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   5.5   1.4e-06    0.0015      35     102 ..      88     152 ..      73     175 .. 0.47

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.4e-06
    PF07423.6  35 lvgnskskkasadeeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekk 102
                  +++ +++++a +   +++ +e+ee++eeee+  ++ +    + ++dd+++e +d+e+eeeee+++e +
  MMETSP1325-20131115|10236_1  88 FFSMHSADAAHDAGPDDDDEEEEEEKEEEEIGADAADD---AAADDDDDDEGDDDEEEEEEEDDDEGE 152
                  44333333333333333444444444444433333333...333332233333333333333322222 PP

>> PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   5.8     9e-05     0.095     223     268 ..     103     164 ..      86     193 .] 0.49

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9e-05
    PF05327.6 223 ddlddeeeeellaeee..eeeeeelfdlddddseeesvesedeedee..............a 268
                  dd+d+eeeee  +ee   + ++++  d+dddd+ ++++e+e+eed++              +
  MMETSP1325-20131115|10236_1 103 DDDDEEEEEEKEEEEIgaDAADDAAADDDDDDEGDDDEEEEEEEDDDegepkpptanadtaS 164
                  55544333333333223344444445555555444333333333333455556555555550 PP

>> PF11711.3  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.1   0.00013      0.14     209     269 ..     108     163 ..      85     192 .. 0.43

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00013
    PF11711.3 209 eeeeaaeeevekteaaeeeaeeeeekaeeekeekedeeeeekekpkkppvpkpyiapeeya 269
                  eeee      +++e+  ++a++++++++++++e +d+eeee+e++  +  pkp  a++++a
  MMETSP1325-20131115|10236_1 108 EEEEE-----KEEEEIGADAADDAAADDDDDDEGDDDEEEEEEEDDDEGEPKPPTANADTA 163
                  11111.....122222233333333333333344444444444343444444444444433 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9  14.9   0.00013      0.14     346     397 ..     103     153 ..      87     188 .. 0.36

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00013
    PF04147.7 346 ededeeeddddeeeeeedvdedee...eedeedeesddeeeeeeeeeaseeeaea 397
                  +d+deee+++ ee ee  +d  ++   ++d++de +ddeeeeeee++   +e e+
  MMETSP1325-20131115|10236_1 103 DDDDEEEEEEKEE-EEIGADAADDaaaDDDDDDEGDDDEEEEEEEDD---DEGEP 153
                  1111111111111.111111111111111111111111111111111...11111 PP

>> PF07543.7  Protein trafficking PGA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.5   0.00038       0.4      31      98 ..      81     153 ..      75     159 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00038
    PF07543.7  31 RPY....liklaekaqkkkke.keraeaeaeraekakisanalrgaatagelevedtddEedeedvaeasava 98 
                  RP+    + +++  + +++    +  e e+e++e+ +i+a+a  +aa+    + e  ddEe+ee+ ++ ++++
  MMETSP1325-20131115|10236_1  81 RPFpffvFFSMHSADAAHDAGpDDDDEEEEEEKEEEEIGADAADDAAADDDDDDEGDDDEEEEEEEDDDEGEP 153
                  555556666777665555443134456666677889**********999998888888887777766666655 PP

>> PF09073.5  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  15.3   0.00066       0.7     180     238 ..      95     152 ..      90     184 .. 0.54

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00066
    PF09073.5 180 dssddeeseeddsdsdeeeesdse.dlsqydallvsssdeesgeeqdesddeeesesese 238
                  d+++ +++ +dd++++eee++++e   +  d++ ++++d+++g++++e+ +eee+++e e
  MMETSP1325-20131115|10236_1  95 DAAH-DAGPDDDDEEEEEEKEEEEiGADAADDAAADDDDDDEGDDDEEE-EEEEDDDEGE 152
                  3333.34444444444444444446778888888888888888753222.2222222222 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  14.6    0.0031       3.3     442     508 ..      99     150 ..      89     186 .. 0.41

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0031
   PF03344.10 442 eekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedeeknde 508
                  +  ++++++ee++ekeee+                 ad   +  ++   ++egdd+eeee+ee++de
  MMETSP1325-20131115|10236_1  99 DAGPDDDDEEEEEEKEEEE---------------IGADAADDAAADDDDDDEGDDDEEEEEEEDDDE 150
                  2222222222222222222...............222222222222222222222222222222221 PP

>> PF00183.13  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   6.8    0.0036       3.8      29      75 ..     112     154 ..      76     163 .. 0.53

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0036
                  E---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXE CS
   PF00183.13  29 kevekevpdeeeeeekeekeeeeekeeeekkeeeeeeeeeeeekkkk 75 
                   ++e e+ ++ +++++ +++++    +e+++ eeeeeee+++e ++k
  MMETSP1325-20131115|10236_1 112 EKEEEEIGADAADDAAADDDDD----DEGDDDEEEEEEEDDDEGEPK 154
                  1122222233222222222222....244444445555555555554 PP

>> PF09421.5  Frequency clock protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   8.8    0.0037       3.8     852     921 ..      84     149 ..      71     183 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0037
    PF09421.5 852 PPaiffPPfsadssydseddlgsdedeedesseeflsrranPhqsdneypdkvdlasddetdeepdddld 921
                  P  +ff   sad+++d + d   +e+ee++  ee  +  a+   +d+   d++d   dde++ee +dd d
  MMETSP1325-20131115|10236_1  84 PFFVFFSMHSADAAHDAGPDDDDEEEEEEKEEEEIGADAADDAAADD---DDDDEGDDDEEEEEEEDD-D 149
                  33467777777777777777554444444444444455556666666...666777777776666665.2 PP

>> PF11696.3  Protein of unknown function (DUF3292)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   4.9    0.0048         5     221     268 ..      90     136 ..      86     147 .. 0.80

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0048
    PF11696.3 221 avesaagkhdqgtpedaaeessvpdavdvvakaadaqaaaagevpaev 268
                  ++ sa + hd g  +d+ ee+++ + ++++a aad  aa + +  +e 
  MMETSP1325-20131115|10236_1  90 SMHSADAAHDAGPDDDDEEEEEEKEEEEIGADAADDAAADDDDD-DEG 136
                  699*******************************9877654443.333 PP

>> PF04006.7  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  15.9    0.0044       4.6     113     165 ..      99     151 ..      91     168 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0044
    PF04006.7 113 deedeaddeeeeeelEeeeml.deadleeveesseeelsdeeeeddeeekmeee 165
                  d   ++ddeeeeee Eeee+  d ad  + ++++ +e +d+eee++ee++ e +
  MMETSP1325-20131115|10236_1  99 DAGPDDDDEEEEEEKEEEEIGaDAADDAAADDDDDDEGDDDEEEEEEEDDDE-G 151
                  4555788888899999999666777777776666665555555544444443.2 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  11.5     0.008       8.4      32      84 ..     104     162 ..      83     165 .. 0.52

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.008
   PF03896.11  32 aqdltedeeaeddvvdedeedeaeveedekteaeeeedee.ea....gevk.aspdadt 84 
                   +d  e+ee e++++  d +d+a  ++d+  e +++e+ee e+    ge k    +adt
  MMETSP1325-20131115|10236_1 104 DDDEEEEEEKEEEEIGADAADDAAADDDDDDEGDDDEEEEeEEdddeGEPKpPTANADT 162
                  34556666677777777887777777666655333333221211223444313445665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       776  (0.0567583); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                       151  (0.0110445); expected 13.7 (0.001)
Passed Fwd filter:                        56  (0.00409596); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.89u 0.40s 00:00:01.29 Elapsed: 00:00:00.60
# Mc/sec: 770.83
//
Query:       MMETSP1325-20131115|10238_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 217.85
//
Query:       MMETSP1325-20131115|10237_1  [L=332]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-29  102.1   4.0    3.5e-29  102.1   2.8    1.4  1  PF02156.10 Glycosyl hydrolase family 26


Domain annotation for each model (and alignments):
>> PF02156.10  Glycosyl hydrolase family 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.1   2.8   2.6e-33   3.5e-29     130     258 ..       4     140 ..       1     162 [. 0.78

  Alignments for each domain:
  == domain 1    score: 102.1 bits;  conditional E-value: 2.6e-33
                  HHHHHHHHHHHHHHHCHCT--..--EEEE-S-S-----S-----STCHHHHHHHHHHHHHHHHHCT----SEEEE---BTTSS-.TCCC...-----S-SEE-EE---S-GCC-H...HHHHHHHCT-.CHCCCCCCHH CS
   PF02156.10 130 kllkrdldkiaeqlkkLqneg..vpvlfRplHEanGeWFWWGakgyerpeaykklwkllyerlvdtrglnnliwvyspdnsrdv.aeaf...yPgdeyvDivglDiYaedaassa...daynelvalk.kakklvelte 258
                   ++k+ ld+ia  +k L+ +g  vp++fR++HE++G WFWWG k+  +  ++k +wk+ +++l d +g++nli++y+p +   + +e+f   yPgd+yvDi++ D Y  d++ +    d  + +v +  +  k+v+l+e
  MMETSP1325-20131115|10237_1   4 SVWKEWLDEIATFAKDLKVDGklVPIVFRLFHEMSGFWFWWGTKA-ATGAEFKAAWKYTVDYLKD-KGVHNLIYAYAPAKPTLFyNESFdscYPGDDYVDIISWDRYDLDTTYRQtilDYCDAVVPFAlEHGKVVALGE 140
                  579999************99999*********************7.99999************87.8**********988543312333556***************99766554011333344433323446777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 1623.65
//
Query:       MMETSP1325-20131115|10244_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10243_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-18   64.1   0.0    9.6e-18   63.8   0.0    1.1  1  PF00278.17 Pyridoxal-dependent decarboxylase, C-terminal sheet domain


Domain annotation for each model (and alignments):
>> PF00278.17  Pyridoxal-dependent decarboxylase, C-terminal sheet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   0.0     7e-22   9.6e-18      23     114 ..      63     173 ..      23     175 .. 0.85

  Alignments for each domain:
  == domain 1    score: 63.8 bits;  conditional E-value: 7e-22
                  C........EEEESS-HHCHTTHHHHS----EEECSS..-TTTTEEEEEEEESSS-TT--SEE.........EEEEEE-TTS--EEEES-----TCTC-B.-CCC--.-EEE CS
   PF00278.17  23 v........dvyvndgvfqspdswlidqlfpilplsr..laeeptrkatlaGptCdsdDviak.........estlplelkegdllvffdvGAYtealas.nfngfgdpaev 114
                  v        ++ +++g+ + +++ l+++++p +++     a+++t+ ++++G++C+s+D +           e++l  + ++gd+lv++  GAY++a+++ n+n+f++ +e 
  MMETSP1325-20131115|10243_1  63 VstgptghtFLKLDAGMTDVLRPSLYGAQHPLVVVPAdpAANRETENVVVVGHCCESGDLLSCapdepetidERELT-KAEVGDFLVVEGSGAYCSAMSTkNYNSFPEAPEL 173
                  133333443777*********************99998899********************7677888888788888.*****************************98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 935.50
//
Query:       MMETSP1325-20131115|10242_1  [L=306]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-63  214.4   0.2    1.9e-63  214.1   0.1    1.1  1  PF00481.16 Protein phosphatase 2C
    1.1e-08   34.6   0.0    1.9e-08   33.8   0.0    1.4  1  PF13672.1  Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.1   0.1   2.7e-67   1.9e-63      10     257 .]       9     262 ..       2     262 .. 0.93

  Alignments for each domain:
  == domain 1    score: 214.1 bits;  conditional E-value: 2.7e-67
                  CCCHHHHHHHHH----SSTHCCCHHCCCHCCCHHHHHHHHHCHHHHHHHHHHHHHHTTXX.........XXGGHCHHHHHH.HHCHHHHHHCCS..HTT---EEEEEEESSSEEEEEEE---EEEEEE---EEEESS---STTSHHHHHHHHH----EE-T--EE---BSBSB----HHHC---...ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHHHHHHHHHHHHHHHT.HHHHHTS-SSHHHHHHHHHHHH CS
   PF00481.16  10 gfrksmedahialknlekssgkssvaffavfdghggreaakyarehleeilkerksflele........klekalrksfladtdeelksseant.epsksGstavvalirgqklyvAnvGDSravLcrsdnakkeltedHkpsnedEreRIeeaggsvsngngRvngsLavsRalGdfelkpke...keqlvsaePdvtsvkideedefliLasDGlwdvlsdqeavdlvrselskkk.spmeaaeelvdeaiargsedni 257
                     +++ dah+   ++   ++ s+ a++avfdghgg+ aa+ya+e+l e+l++ +s  +          +   al ++fl+ +d++l+++ a +   ++sG+ta+ +++++++++vAn+GDSr  + + +n++ +l+edHkp n +E++RIe+agg vs  ++Rv g LavsRalGdf++k+ e   k   v+a Pd+   +++++d+f+iLa+DG+wdv+++++a + +++ +++++ sp+ ++ee++ +++++ s+dn+
  MMETSP1325-20131115|10242_1   9 TTTTTVKDAHTVASSMP--NDLSDHALYAVFDGHGGQYAARYASEQLLEVLQQIPSYVSYIeggngdpkLMGSALQEAFLE-LDKNLRDEVA-RmPNERSGCTAIACVVSPSHIIVANAGDSRGAMLTGGNTE-ALSEDHKPFNAEEKSRIEAAGGCVS--MKRVDGELAVSRALGDFQFKDIEldaKLTKVTAFPDIVIKDRSDDDQFVILACDGIWDVMTNEQATSSITRYCEEGEaSPRLMCEEMMCDCLEKSSRDNM 262
                  55677889999999887..589******************************99998877678889999999*********.******9444.4378***********************************9.*************************..*********************99*997778************************************999888888778********************97 PP

>> PF13672.1  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   2.8e-12   1.9e-08      21     196 ..      28     237 ..       5     255 .. 0.70

  Alignments for each domain:
  == domain 1    score: 33.8 bits;  conditional E-value: 2.8e-12
    PF13672.1  21 dsdgwllaVaDGaGsakrSdeGsrlaveaa..gealeelleeeeeqeeallrailneilaevklkaeaeaqqeelkdyatTlllavitpgeivffqiGDgaivvrdrdgevqllgepds.......................geyanettfltsedaeeel............................rvrrlklepvdalllmTDGlsnslrdeeafapllkellee 196
                   sd +l aV DG+G    ++ +s+ + e +  +  + +++e ++ + + +  a++++ l e++++ + e ++++ +  ++T +++v++p +i +++ GD++  ++ + g++++l+e+++                       g              e  l                             v + + ++ + ++l  DG+++ +++e+  ++ +++++ee
  MMETSP1325-20131115|10242_1  28 LSDHALYAVFDGHGGQYAARYASEQLLEVLqqIPSYVSYIEGGNGDPKLMGSALQEAFL-ELDKNLRDEVARMPNERSGCTAIACVVSPSHIIVANAGDSRG-AMLTGGNTEALSEDHKpfnaeeksrieaaggcvsmkrvdG--------------E--LavsralgdfqfkdieldakltkvtafpdIVIKDRSDDDQFVILACDGIWDVMTNEQ-ATSSITRYCEE 237
                  4666677*******888877777777776644445555557777775555555555555.4556777888999*****************************.5789*********999666555555333333333322221..............2..133555666666666777778877777743333335778899999*****9887665.45555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       384  (0.0280866); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1410.16
//
Query:       MMETSP1325-20131115|10249_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.45
# Mc/sec: 282.24
//
Query:       MMETSP1325-20131115|10247_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.047   13.6   2.2       0.12   12.3   1.5    1.6  1  PF01694.17 Rhomboid family
      0.078   12.7   0.1       0.25   11.1   0.1    1.8  1  PF06679.7  Protein of unknown function (DUF1180)
       0.12   12.0   1.5        2.9    7.5   0.1    2.6  3  PF10027.4  Predicted integral membrane protein (DUF2269)


Domain annotation for each model (and alignments):
>> PF01694.17  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.5   2.5e-05      0.12      80     144 ..      14     111 ..       8     113 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.5e-05
                  HH---CCCHHHCCTTS.....--------HCCCCCHHH.----S---.................................HH-------HHHHHHHHH CS
   PF01694.17  80 gllgallvllllnrkqlraipaallllliiiainlllgflpgidnfa.................................HlgGfivGlllgflllkr 144
                  ++ + ++ ++++++ ++r++pa++++ll+ ++ +++l     ++ ++                                 HlgG+++ ++lg++++ +
  MMETSP1325-20131115|10247_1  14 AIAARVVPEFVSQKSRFRRQPAVMIMLLMPLFTSFMLWGPSDVSVSGaasiflfinglfiafpklrteepagigapdhasHLGGAATAAVLGWCWRMW 111
                  566666666777777777666655555554444333333333333336677778888888888888888999**********************9876 PP

>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   5.4e-05      0.25     133     159 ..     173     199 ..     167     201 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5.4e-05
    PF06679.7 133 dTnienlEltPLeeDDeddDsTlFDan 159
                   T++  +El PL+e  edd+ T+ D++
  MMETSP1325-20131115|10247_1 173 STQLSSIELSPLNEGKEDDEATMSDMK 199
                  58999******************9987 PP

>> PF10027.4  Predicted integral membrane protein (DUF2269)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.71   3.2e+03      41      51 ..      10      20 ..       3      51 .. 0.56
   2 ?    3.8   0.0    0.0085        39       9      42 ..      61      94 ..      57      97 .. 0.88
   3 ?    7.5   0.1   0.00064       2.9      12      45 ..      94     127 ..      91     139 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.71
    PF10027.4 41 arlvvladwll 51
                 ar+v++a++++
  MMETSP1325-20131115|10247_1 10 ARVVAIAARVV 20
                 44444444332 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.0085
    PF10027.4  9 vaavllfgtgfglaflllrarrtrdaeviaraar 42
                  a+++lf++g+++af  lr ++ +   ++ +a++
  MMETSP1325-20131115|10247_1 61 AASIFLFINGLFIAFPKLRTEEPAGIGAPDHASH 94
                 799****************999888888888876 PP

  == domain 3    score: 7.5 bits;  conditional E-value: 0.00064
    PF10027.4  12 vllfgtgfglaflllrarrtrdaeviaraarlvv 45 
                   l   +++++ ++++r++++ +ae+ a a +++ 
  MMETSP1325-20131115|10247_1  94 HLGGAATAAVLGWCWRMWQGPEAETTAFAPPWIS 127
                  566678889999*****************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.36s 00:00:00.95 Elapsed: 00:00:00.47
# Mc/sec: 1422.52
//
Query:       MMETSP1325-20131115|10251_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|10254_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.078   12.7   0.0        0.1   12.3   0.0    1.3  1  PF09378.5 HAS barrel domain
       0.16   12.0   4.2       0.24   11.5   2.9    1.2  1  PF11928.3 Domain of unknown function (DUF3446)


Domain annotation for each model (and alignments):
>> PF09378.5  HAS barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.5e-05       0.1      16      48 ..      42      79 ..      34     101 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.5e-05
    PF09378.5 16 rveglk.....dvrvGeyVeielqdgekvlGmvldier 48
                 ++++++      + vG++Vei + ++++++G+v+ +  
  MMETSP1325-20131115|10254_1 42 TSDDDAiqqfcALLVGDLVEICYKGNRWIVGRVTKLIG 79
                 555555666666779*******************9866 PP

>> PF11928.3  Domain of unknown function (DUF3446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.9   3.5e-05      0.24      40      79 ..       8      44 ..       2      46 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.5e-05
    PF11928.3 40 ssssssssassqssslscsvsqsepepiYsaaPtYssacg 79
                 ++ss  ssass+ss+      + +p+++ + aP++  ++ 
  MMETSP1325-20131115|10254_1  8 ATSS-LSSASSSSSNS--RKRKRDPSHVNPVAPAFKATSD 44
                 2222.33444333333..4567899**********98544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 604.30
//
Query:       MMETSP1325-20131115|10253_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-34  118.3   0.1    2.3e-34  118.1   0.1    1.0  1  PF01652.13 Eukaryotic initiation factor 4E


Domain annotation for each model (and alignments):
>> PF01652.13  Eukaryotic initiation factor 4E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.1   0.1   1.7e-38   2.3e-34      54     165 .]       2     114 ..       1     114 [. 0.97

  Alignments for each domain:
  == domain 1    score: 118.1 bits;  conditional E-value: 1.7e-38
                  S-EEEEEETT--SSTTTCCCH----EEEEEE--....-HHHHHHHHHHHH---TT---SSSB---EEEE---EEEEEE-BS-TTHHHHHHH---HHHHHCT-SS-B..EEE-H CS
   PF01652.13  54 ksdyhlFkegikPmWEdpankkGGkwvirlkkks.kkeldelWeelllaliGesleeaedeicGvvlsvRkkedrisvWtknasdeeakkkigkklkevlelpekeklefkah 165
                  +sdy lF +gi+P WEd+an+kGG+w+++++k++ +++lde W+  +l +iGe+l++++ ei Gvv+s+Rk+edr++vWt+na++ee ++kig++l++++++p + +++++ah
  MMETSP1325-20131115|10253_1   2 QSDYSLFVKGIQPTWEDEANAKGGRWIVTIPKSErHRSLDEWWLYSMLTCIGETLDDTGTEIAGVVVSIRKREDRVAVWTRNAANEELQMKIGRELRRLVGIPINVAVKYQAH 114
                  79*****************************9997789*****************999****************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 687.65
//
Query:       MMETSP1325-20131115|10250_1  [L=457]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-39  133.2   0.0      7e-38  129.7   0.0    2.6  3  PF08623.5  TATA-binding protein interacting (TIP20)
    2.2e-14   52.0   1.3     0.0007   19.3   0.0    6.2  6  PF02985.17 HEAT repeat
    5.4e-11   42.5   0.4    0.00034   20.6   0.0    3.7  4  PF13646.1  HEAT repeats
    4.7e-06   26.9   1.3        1.6    9.2   0.1    5.2  6  PF13513.1  HEAT-like repeat
     0.0034   17.6   0.0        6.1    7.1   0.0    3.7  3  PF12755.2  Vacuolar 14 Fab1-binding region
     0.0058   16.3   0.1        3.8    7.1   0.1    3.5  3  PF12717.2  non-SMC mitotic condensation complex subunit 1
     0.0064   14.7   1.6        7.4    4.6   0.0    3.6  3  PF01602.15 Adaptin N terminal region
     0.0096   15.7   0.1      0.097   12.4   0.0    2.3  2  PF11865.3  Domain of unknown function (DUF3385)
  ------ inclusion threshold ------
      0.048   12.8   1.5       0.49    9.5   0.0    2.9  4  PF06012.7  Domain of Unknown Function (DUF908)
      0.053   13.2   0.5         22    4.9   0.0    3.7  3  PF00514.18 Armadillo/beta-catenin-like repeat
       0.06   12.5   0.0       0.18   10.9   0.0    1.8  1  PF12348.3  CLASP N terminal
       0.08   10.4   0.0       0.11   10.0   0.0    1.1  1  PF12722.2  High-temperature-induced dauer-formation protein


Domain annotation for each model (and alignments):
>> PF08623.5  TATA-binding protein interacting (TIP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.4   1.6e+03      49      73 ..      10      34 ..       5      66 .. 0.57
   2 ?   -0.7   0.0       0.7     8e+02      30     105 ..     121     206 ..     117     254 .. 0.59
   3 !  129.7   0.0   6.1e-41     7e-38       4     168 ..     279     441 ..     276     442 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.4
    PF08623.5 49 etlytlLetalskldiaelleriia 73
                 + ly l++t+ ++++ ++ +  i +
  MMETSP1325-20131115|10250_1 10 DELYELIQTKVNDVEQKQGIANIAH 34
                 4455555544444444333333333 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.7
    PF08623.5  30 mGPFkhkvDdGLelRKlayetlytlLe.....talskld....iaelleriiaGLkD.eedikllallmlsklaslapeeilarld 105
                  mG +  ++ d+L+  +  y +l++l e     +++s ld    i+++l ++++  +  ee ++ +   +l  l +++pe i+  l+
  MMETSP1325-20131115|10250_1 121 MGGYLPVILDSLNANRHHYLLLSALKEvivlhANTSGLDfssyIEQVLPHLLKHCESaEEGVRNMVAECLGALITMHPETIVPALT 206
                  66666666666666666666666654444333333444433333333333444444445556666666666666666666655555 PP

  == domain 3    score: 129.7 bits;  conditional E-value: 6.1e-41
    PF08623.5   4 lpll.sellpalyketkvkkelirevqmGPFkhkvDdGLelRKlayetlytlLetalskldiaelleriiaGLkDeedikllallmlsklaslapeeilarldalaealkktlskkvkekavkqelEkqqelirsvlrlvkslkkkldeaekspevwkefveevkk 168
                     l  +++p ly+  + k+e  r v++GPFk kvDdGL lRK+a  +++t+L+t+ +++d+ +++  ++ GL D+ed+++l++++l k+   ap ++l  ld+l+++l+kt++kkvke  v +e+++++elirs lr+v ++ +++d+++  ++++ +fv+ ++k
  MMETSP1325-20131115|10250_1 279 ISFLdAKIIPVLYETVRLKQE--RVVDLGPFKQKVDDGLPLRKTALACINTVLDTLPDQMDVGAFMPFLETGLGDKEDVQMLCHQILIKICGYAPGAVLSSLDSLVDPLEKTVTKKVKEGQVGTEVDRANELIRSGLRAVLAI-SAIDDSAGISRKFWDFVDRIQK 441
                  455546899*****9999998..99**********************************************************************************************************************.9999999999899999999987 PP

>> PF02985.17  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.17   1.9e+02       5      30 ..      55      80 ..      52      81 .. 0.86
   2 !    7.6   0.0    0.0036       4.1       5      28 ..      94     117 ..      93     119 .. 0.91
   3 !   19.3   0.0   6.2e-07    0.0007       1      28 [.     167     194 ..     167     197 .. 0.95
   4 !   13.1   0.0   6.3e-05     0.072       2      22 ..     245     265 ..     245     269 .. 0.90
   5 ?   -2.1   0.0       4.5   5.1e+03      17      27 ..     318     328 ..     317     331 .. 0.82
   6 ?    1.8   0.0      0.25   2.9e+02       1      15 [.     341     354 ..     341     368 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.17
                 HHHHHTSSSHHHHHHHHHHHHHHHHC CS
   PF02985.17  5 llkllnDpspeVReaAaeaLgalaev 30
                 l+++ln ++++ R+ A+ ++g+l + 
  MMETSP1325-20131115|10250_1 55 LVEALNGSEESRRNLALLTIGELGQE 80
                 778888899999**********9875 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0036
                  HHHHHTSSSHHHHHHHHHHHHHHH CS
   PF02985.17   5 llkllnDpspeVReaAaeaLgala 28 
                  +l+ +++ s+e + aAa+aLg++a
  MMETSP1325-20131115|10250_1  94 VLESFESASEETKTAAAYALGRMA 117
                  6789999**************997 PP

  == domain 3    score: 19.3 bits;  conditional E-value: 6.2e-07
                  HHHHHHHHHTSSSHHHHHHHHHHHHHHH CS
   PF02985.17   1 llPlllkllnDpspeVReaAaeaLgala 28 
                  +lP+llk++++ ++ VR+++ae+Lgal+
  MMETSP1325-20131115|10250_1 167 VLPHLLKHCESAEEGVRNMVAECLGALI 194
                  69************************97 PP

  == domain 4    score: 13.1 bits;  conditional E-value: 6.3e-05
                  HHHHHHHHTSSSHHHHHHHHH CS
   PF02985.17   2 lPlllkllnDpspeVReaAae 22 
                  +  +l++lnD++ +VR aA++
  MMETSP1325-20131115|10250_1 245 MENFLEMLNDEDLQVRHAALS 265
                  5679***************85 PP

  == domain 5    score: -2.1 bits;  conditional E-value: 4.5
                  HHHHHHHHHHH CS
   PF02985.17  17 ReaAaeaLgal 27 
                  R++A+ ++ ++
  MMETSP1325-20131115|10250_1 318 RKTALACINTV 328
                  999**999876 PP

  == domain 6    score: 1.8 bits;  conditional E-value: 0.25
                  HHHHHHHHHTSSSHH CS
   PF02985.17   1 llPlllkllnDpspe 15 
                  ++P+l+++l D++ +
  MMETSP1325-20131115|10250_1 341 FMPFLETGLGDKE-D 354
                  59*********98.4 PP

>> PF13646.1  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0     0.008       9.2      18      67 ..      30      86 ..      15      92 .. 0.75
   2 !   16.8   0.1   4.6e-06    0.0053       4      72 ..      55     133 ..      52     148 .. 0.74
   3 !   20.6   0.0     3e-07   0.00034       1      84 [.     168     264 ..     168     266 .. 0.76
   4 !    7.5   0.0    0.0039       4.5      33      54 ..     245     266 ..     214     292 .. 0.66

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.008
    PF13646.1 18 aaaieaLgqlgse.......ealpaLlelLkdsdpevRraAaeaLgklgdpealpaL 67
                 a+++++L++l  +       +++  L+e+L+ s+++ R  A+  +g+lg++  l a 
  MMETSP1325-20131115|10250_1 30 ANIAHCLATLCVAtsedkrsTTVGSLVEALNGSEESRRNLALLTIGELGQEVDLTAT 86
                 5678888855444222223366**************************987666555 PP

  == domain 2    score: 16.8 bits;  conditional E-value: 4.6e-06
    PF13646.1   4 LlaaLekdpdpevraaaieaLgqlgse........ealpaLlelLkdsdpevRraAaeaLgkl..gd.pealpaLlklld 72 
                  L++aL + ++++ r  a+ ++g+lg+e         +  ++le  ++ ++e++ aAa+aLg++  g+    lp++l+ l 
  MMETSP1325-20131115|10250_1  55 LVEAL-NGSEESRRNLALLTIGELGQEvdltatvdGLQMIVLESFESASEETKTAAAYALGRMavGNmGGYLPVILDSLN 133
                  89999.7777778888*********99888766633355666999*****************933332335666666555 PP

  == domain 3    score: 20.6 bits;  conditional E-value: 3e-07
    PF13646.1   1 leaLlaaLekdpdpevraaaieaLg...qlgseealpaLlelL....kdsdpevRraAaeaLgkl..g......dpealpaLlklldddedavvreaaa 84 
                  l+ Ll+   +++++ vr  ++e+Lg   +++ e+++paL+ l        +  +R+++a +L  +  g        e ++  l++l +ded +vr+aa+
  MMETSP1325-20131115|10250_1 168 LPHLLKHC-ESAEEGVRNMVAECLGaliTMHPETIVPALTNLGaggsGEAEGLMRWTIASSLKYCmtGraphaiLMEHMENFLEML-NDEDLQVRHAAL 264
                  68899999.8999************99999***********996743334566**********87332222222244455555555.7899999*9986 PP

  == domain 4    score: 7.5 bits;  conditional E-value: 0.0039
    PF13646.1  33 lpaLlelLkdsdpevRraAaea 54 
                  ++  le+L+d+d  vR+aA+  
  MMETSP1325-20131115|10250_1 245 MENFLEMLNDEDLQVRHAALSM 266
                  6777888888888888888765 PP

>> PF13513.1  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.69   7.8e+02      30      55 .]      52      77 ..      30      77 .. 0.64
   2 !    9.2   0.1    0.0014       1.6       4      55 .]      67     116 ..      64     116 .. 0.63
   3 !    6.8   0.0    0.0083       9.5       3      19 ..     105     121 ..     103     133 .. 0.67
   4 ?    6.4   0.0     0.011        12      23      55 .]     161     193 ..     142     193 .. 0.87
   5 ?    4.2   0.0     0.053        60      32      49 ..     247     264 ..     232     268 .. 0.84
   6 ?   -0.5   0.0       1.6   1.8e+03      22      42 ..     334     354 ..     316     358 .. 0.59

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.69
    PF13513.1 30 lpaLlelLeddddeVReaAawALgrl 55
                 +  L+e+L+ ++++ R +A++++g+l
  MMETSP1325-20131115|10250_1 52 VGSLVEALNGSEESRRNLALLTIGEL 77
                 44566666655556699999888875 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0014
    PF13513.1   4 RraAawaLGrlaggeprllepavpellpaLl.elLed..ddd.eVReaAawALgrl 55 
                  R+ A++++G+l       +e  +++ ++ L+   Le+  + + e+++aAa+ALgr+
  MMETSP1325-20131115|10250_1  67 RNLALLTIGELG------QEVDLTATVDGLQmIVLESfeSASeETKTAAAYALGRM 116
                  788899998755......333444444444442223322555599*********96 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0083
    PF13513.1   3 vRraAawaLGrlaggep 19 
                   + aAa+aLGr+a+g++
  MMETSP1325-20131115|10250_1 105 TKTAAAYALGRMAVGNM 121
                  5789999***9885554 PP

  == domain 4    score: 6.4 bits;  conditional E-value: 0.011
    PF13513.1  23 epavpellpaLlelLeddddeVReaAawALgrl 55 
                  + +++++lp Ll+  e+ ++ VR  +a +Lg+l
  MMETSP1325-20131115|10250_1 161 SSYIEQVLPHLLKHCESAEEGVRNMVAECLGAL 193
                  5688999*****99999999***********86 PP

  == domain 5    score: 4.2 bits;  conditional E-value: 0.053
    PF13513.1  32 aLlelLeddddeVReaAa 49 
                   +le+L+d+d +VR+aA+
  MMETSP1325-20131115|10250_1 247 NFLEMLNDEDLQVRHAAL 264
                  46789998888*****96 PP

  == domain 6    score: -0.5 bits;  conditional E-value: 1.6
    PF13513.1  22 lepavpellpaLlelLedddd 42 
                   +  v + +p+L  +L d++d
  MMETSP1325-20131115|10250_1 334 DQMDVGAFMPFLETGLGDKED 354
                  334688889999999987665 PP

>> PF12755.2  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0054       6.1      20      67 ..     159     206 ..     142     209 .. 0.83
   2 ?    5.0   0.0     0.025        28      25      62 ..     241     277 ..     222     301 .. 0.75
   3 ?    0.1   0.0      0.85   9.7e+02      40      81 ..     352     393 ..     318     405 .. 0.66

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0054
    PF12755.2  20 kvkefleeivkpvlacfsDkdsrvRyyacEslyniakvakgevlkfln 67 
                  + ++++e++++ +l+ ++ +++ vR  ++E+l  ++ +  +++++ l+
  MMETSP1325-20131115|10250_1 159 DFSSYIEQVLPHLLKHCESAEEGVRNMVAECLGALITMHPETIVPALT 206
                  3789***************************99988888888877765 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.025
    PF12755.2  25 leeivkpvlacfsDkdsrvRyyacEslyniakvakgev 62 
                  l e ++  l++++D+d +vR+ a  s+ n a   + ++
  MMETSP1325-20131115|10250_1 241 LMEHMENFLEMLNDEDLQVRHAAL-SMCNAAVHHQPSL 277
                  5666788999**********8765.5666554444444 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.85
    PF12755.2  40 dsrvRyyacEslyniakvakgevlkflneifdalcklvaDsd 81 
                   + v       l  i+  a g+vl+ l ++ d l k v+ + 
  MMETSP1325-20131115|10250_1 352 KEDVQMLCHQILIKICGYAPGAVLSSLDSLVDPLEKTVTKKV 393
                  345667777788889999999999999999999988876554 PP

>> PF12717.2  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.7   1.9e+03     111     141 ..      33      62 ..      14      86 .. 0.63
   2 ?    4.2   0.0     0.027        30      19      54 ..     160     195 ..     157     199 .. 0.93
   3 !    7.1   0.1    0.0034       3.8      25      50 ..     243     268 ..     237     378 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.7
    PF12717.2 111 nnctehelveeldeerrkkiyrfllefikkd 141
                  ++c +  +v  ++e++r++++  l+e ++ +
  MMETSP1325-20131115|10250_1  33 AHCLATLCV-ATSEDKRSTTVGSLVEALNGS 62 
                  344444444.356666666666666666542 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.027
    PF12717.2  19 ypnlvdpyleklyacLkdedalvRktallvlshLil 54 
                  +++ +++ l++l++ +++ ++ vR+  + +l  Li 
  MMETSP1325-20131115|10250_1 160 FSSYIEQVLPHLLKHCESAEEGVRNMVAECLGALIT 195
                  8999***************************99996 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0034
    PF12717.2  25 pyleklyacLkdedalvRktallvls 50 
                  +++e+++++L+ded  vR+ al +++
  MMETSP1325-20131115|10250_1 243 EHMENFLEMLNDEDLQVRHAALSMCN 268
                  57788888888888888888887765 PP

>> PF01602.15  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0065       7.4     236     298 ..     130     200 ..      83     209 .. 0.71
   2 ?    1.7   0.1     0.048        55     152     193 ..     245     292 ..     235     300 .. 0.73
   3 ?    0.3   0.0      0.13   1.5e+02     128     164 ..     317     354 ..     311     395 .. 0.78

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0065
   PF01602.15 236 nllq.ssnnaVlletvklivelapkne......livlavnaLvrllsskdenlryvaLrnlnkileke.ka 298
                    l+ +++  +ll++ k ++ l  +++      +i++++  L + ++s +e++r ++ ++l  + + + ++
  MMETSP1325-20131115|10250_1 130 DSLNaNRHHYLLLSALKEVIVLHANTSgldfssYIEQVLPHLLKHCESAEEGVRNMVAECLGALITMHpET 200
                  45555666777777777776666666667777777777777777777777777777777777766666443 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.048
   PF01602.15 152 ieeikellsdkdpgVvlaAvalleei.kkndrlll.....kllpklvr 193
                  +e + e+l+d+d  V  aA++++     ++++l +     k++p l++
  MMETSP1325-20131115|10250_1 245 MENFLEMLNDEDLQVRHAALSMCNAAvHHQPSLIIsfldaKIIPVLYE 292
                  68889999**************99994444444336666666666665 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.13
   PF01602.15 128 VrkkAalailklykkdpdlvrke.lieeikellsdkdp 164
                  +rk+A+ +i ++++  pd++    +++ ++  l dk+ 
  MMETSP1325-20131115|10250_1 317 LRKTALACINTVLDTLPDQMDVGaFMPFLETGLGDKED 354
                  79*****************9999999999999988774 PP

>> PF11865.3  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   8.5e-05     0.097      96     157 ..     130     195 ..     116     197 .. 0.83
   2 ?    0.0   0.0      0.56   6.4e+02      85     140 ..     242     297 ..     227     308 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.5e-05
    PF11865.3  96 kdpslsshhtavvqaimsif....kslglkcvsflaqvipallsvirtleaslleflfqqlstlvs 157
                         hh  +++a  +++    +++gl+  s+++qv+p ll++  ++e+  ++++   l+ l++
  MMETSP1325-20131115|10250_1 130 DSLNANRHHYLLLSALKEVIvlhaNTSGLDFSSYIEQVLPHLLKHCESAEEGVRNMVAECLGALIT 195
                  55555667778888876665566678************************************9997 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 0.56
    PF11865.3  85 tvviksllkilkdpslsshhtavvqaimsifkslglkcvsfl.aqvipallsvirtl 140
                  +  +++ l++l+d+ l+ +h+a+      + ++ +l  +sfl a++ip l +++r  
  MMETSP1325-20131115|10250_1 242 MEHMENFLEMLNDEDLQVRHAALSMCNAAVHHQPSLI-ISFLdAKIIPVLYETVRLK 297
                  5667888899999999999985554444444445554.5555268999999999843 PP

>> PF06012.7  Domain of Unknown Function (DUF908)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.9   2.2e+03     267     310 ..       9      60 ..       8      62 .. 0.57
   2 ?    9.5   0.0   0.00043      0.49     276     325 ..      95     148 ..      90     150 .. 0.84
   3 ?   -0.8   0.0      0.59   6.8e+02     268     310 ..     166     209 ..     158     214 .. 0.76
   4 ?   -0.3   0.0       0.4   4.6e+02      32      52 ..     249     269 ..     240     299 .. 0.77

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.9
    PF06012.7 267 feeLveLlkped.....kvskeiqtlaldaLealle...krvkysdvlaaLg 310
                  f eL eL++ +      k   +  + +l++L++ +    + + + ++++aL+
  MMETSP1325-20131115|10250_1   9 FDELYELIQTKVndveqKQGIANIAHCLATLCVATSedkRSTTVGSLVEALN 60 
                  5678888887755443344444456789999988873323333444555555 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00043
    PF06012.7 276 ped..kvskeiqtlaldaLealle..krvkysdvlaaLganvnhGlLlsllRkl 325
                  +e+  + s+e++t+a++aL  ++   +   ++++l++L+an +h lLls l+++
  MMETSP1325-20131115|10250_1  95 LESfeSASEETKTAAAYALGRMAVgnMGGYLPVILDSLNANRHHYLLLSALKEV 148
                  444448899**********8777666999********************99986 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.59
    PF06012.7 268 eeLveLlkpedkvskeiqtlaldaLeallekrvkysd.vlaaLg 310
                  + L  Llk+ ++ ++ ++  ++++L al+++++   +  l++Lg
  MMETSP1325-20131115|10250_1 166 QVLPHLLKHCESAEEGVRNMVAECLGALITMHPETIVpALTNLG 209
                  55778999999999***************987764332455555 PP

  == domain 4    score: -0.3 bits;  conditional E-value: 0.4
    PF06012.7  32 tsLLnstdldivlaalrvllv 52 
                   ++Ln  dl+++ aal ++ +
  MMETSP1325-20131115|10250_1 249 LEMLNDEDLQVRHAALSMCNA 269
                  578899999999999998855 PP

>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.072        82      23      40 ..     100     117 ..      92     118 .. 0.88
   2 ?    4.9   0.0      0.02        22      13      37 ..     167     191 ..     164     193 .. 0.89
   3 ?    0.2   0.0      0.58   6.6e+02      17      33 ..     248     264 ..     236     265 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.072
                  -SSHHHHHHHHHHHHHHH CS
   PF00514.18  23 sgdeevqeeAawALsNLa 40 
                  s +ee++++Aa AL+ +a
  MMETSP1325-20131115|10250_1 100 SASEETKTAAAYALGRMA 117
                  899***********9877 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.02
                  HHHHHHHHHC-SSHHHHHHHHHHHH CS
   PF00514.18  13 avppLvqLLksgdeevqeeAawALs 37 
                  ++p+L++   s  e+v+   a +L+
  MMETSP1325-20131115|10250_1 167 VLPHLLKHCESAEEGVRNMVAECLG 191
                  89***************99998886 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 0.58
                  HHHHHC-SSHHHHHHHH CS
   PF00514.18  17 LvqLLksgdeevqeeAa 33 
                  ++++L+++d +v+ +A+
  MMETSP1325-20131115|10250_1 248 FLEMLNDEDLQVRHAAL 264
                  6789**********997 PP

>> PF12348.3  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00016      0.18      81     197 ..     153     263 ..     140     277 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00016
    PF12348.3  81 aiqlkhqldpmveillptLlkllgdtkkiisqnanqaladllenasftsrlelqvlsvalqdKNvq...pReysaiwLkillerhgsdkskleasglldliekslkkgleDanpeVReaa 197
                  a + + ++ +++e++lp+Llk + +  + +++  + +l +l++  +  + +++ + ++++ +  +    +R + a  Lk  ++  +        +++l ++++ + ++l D + +VR+aa
  MMETSP1325-20131115|10250_1 153 ANTSGLDFSSYIEQVLPHLLKHCESAEEGVRNMVAECLGALITMHP--ETIVPALTNLGAGGSGEAeglMRWTIASSLKYCMTGRA-------PHAILMEHMENFLEMLNDEDLQVRHAA 263
                  555667899*********************************9988..66645544444333222211144444444444444444.......233333444444566666666666665 PP

>> PF12722.2  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   9.3e-05      0.11     291     366 ..      30     105 ..      10     182 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 9.3e-05
    PF12722.2 291 alVesslqlLlvlllyeipeseklkvevkekllkkkpkNlarsylsrlqreeDLkfilsslirilknPidlaieqe 366
                  a ++ +l  L+v  +++  +++ ++   + + +++  +Nla+  +++l +e DL   +++l  i+ + +++a e+ 
  MMETSP1325-20131115|10250_1  30 ANIAHCLATLCVATSEDKRSTTVGSLVEALNGSEESRRNLALLTIGELGQEVDLTATVDGLQMIVLESFESASEET 105
                  66889*******************9999999999******************************999999776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.91u 0.36s 00:00:01.27 Elapsed: 00:00:00.70
# Mc/sec: 1564.48
//
Query:       MMETSP1325-20131115|10257_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|10255_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                       49  (0.00358397); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.31s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 745.53
//
Query:       MMETSP1325-20131115|10259_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 751.17
//
Query:       MMETSP1325-20131115|10261_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-05   23.3   0.1    5.7e-05   22.0   0.0    1.7  2  PF00036.27 EF hand
    0.00067   19.2   0.0     0.0046   16.6   0.0    2.2  2  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.013   14.6   0.1      0.036   13.2   0.0    1.7  2  PF13202.1  EF hand
      0.027   13.9   0.0      0.044   13.2   0.0    1.3  1  PF13833.1  EF-hand domain pair
      0.057   13.4   0.1       0.11   12.5   0.1    1.4  1  PF13499.1  EF-hand domain pair


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   2.1e-08   5.7e-05       7      28 ..       6      27 ..       2      28 .. 0.88
   2 ?   -2.1   0.0         1   2.8e+03      15      23 ..      47      55 ..      47      60 .. 0.71

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 2.1e-08
                 HHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27  7 kefDkDgdGkIsfeEfkealkk 28
                  ++D++g+ +I+f+Ef+ ++++
  MMETSP1325-20131115|10261_1  6 TKYDTNGSNTIEFDEFLVMIRS 27
                 68****************9986 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1
                 SEBEHHHHH CS
   PF00036.27 15 GkIsfeEfk 23
                 G+I+ + f 
  MMETSP1325-20131115|10261_1 47 GTIDANTFE 55
                 889988775 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.7e-06    0.0046       7      27 ..       6      26 ..       2      34 .. 0.87
   2 ?   -0.5   0.0       0.5   1.4e+03      15      28 ..      47      60 ..      44      65 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.7e-06
                 GCC-------B---HHHHHHH CS
    PF13405.1  7 klfDkdgdGkidaeELrdaLr 27
                 +++D++g+++i+++E++ ++r
  MMETSP1325-20131115|10261_1  6 TKYDTNGSNTIEFDEFLVMIR 26
                 79***************9998 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.5
                 --B---HHHHHHH. CS
    PF13405.1 15 GkidaeELrdaLrk 28
                 G+ida+ +   +rk
  MMETSP1325-20131115|10261_1 47 GTIDANTFEVTFRK 60
                 89999998877765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.3e-05     0.036       7      21 ..       7      21 ..       4      25 .. 0.91
   2 ?   -2.9   0.0       1.7   4.7e+03      14      18 ..      47      51 ..      47      52 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.3e-05
                 HH--S----B-HHHH CS
    PF13202.1  7 afDlNgDGkIsreEL 21
                 ++D+Ng+ +I ++E+
  MMETSP1325-20131115|10261_1  7 KYDTNGSNTIEFDEF 21
                 68************9 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.7
                 --B-H CS
    PF13202.1 14 GkIsr 18
                 G+I++
  MMETSP1325-20131115|10261_1 47 GTIDA 51
                 67774 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.6e-05     0.044      30      50 ..       4      24 ..       2      28 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.6e-05
    PF13833.1 30 lfrefDtdgdGkisfeEFcvl 50
                 l+ + Dt+g++ i f+EF+v+
  MMETSP1325-20131115|10261_1  4 LVTKYDTNGSNTIEFDEFLVM 24
                 67788**************98 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   4.1e-05      0.11      47      65 ..       6      24 ..       2      29 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 4.1e-05
    PF13499.1 47 kelDkngdGvlsfeEflqa 65
                  ++D+ng+ ++ f+Efl +
  MMETSP1325-20131115|10261_1  6 TKYDTNGSNTIEFDEFLVM 24
                 5799999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.32s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 592.55
//
Query:       MMETSP1325-20131115|10262_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|10263_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 374.43
//
Query:       MMETSP1325-20131115|10256_1  [L=899]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-05   24.0   0.0     0.0078   14.9   0.0    3.2  3  PF04053.9  Coatomer WD associated region
     0.0027   17.2   4.3        1.5    8.7   0.1    5.3  5  PF13176.1  Tetratricopeptide repeat
      0.008   15.6   0.3       0.16   11.4   0.0    2.9  3  PF00637.15 Region in Clathrin and VPS
  ------ inclusion threshold ------
       0.11   12.3  12.0       0.25   11.1   0.0    4.2  3  PF13424.1  Tetratricopeptide repeat
        6.1    6.4  16.9        4.7    6.8   0.4    5.2  6  PF13414.1  TPR repeat


Domain annotation for each model (and alignments):
>> PF04053.9  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.38     1e+03      44      91 ..     265     324 ..     241     338 .. 0.53
   2 !   14.9   0.0   2.9e-06    0.0078     332     387 ..     387     442 ..     384     458 .. 0.84
   3 !    5.5   0.0     0.002       5.6     365     441 ..     535     612 ..     445     614 .. 0.72

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.38
    PF04053.9  44 grfvlVcgdgeyiiyt.............alawrnkaygkaldfvwvs..snrfavleksksv 91 
                  g+++++  +g + ++              +l++   +++   d+ w++  +n fav+ek++ +
  MMETSP1325-20131115|10256_1 265 GKLAIIDTNGMFYLMDldasdessgqpghQLQF---ERKDTWDMRWAEdnENMFAVMEKTRMY 324
                  555555555555555555444444433222222...233345667887555558888876543 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 2.9e-06
    PF04053.9 332 gnLevAlelakeldseekWkkLgdaAlsqgniklaeeayqkakdfdkLllLylstg 387
                    L++ +  ++++  +  W+ L++aAl+  ++ +a +a+ ++ d++++  +  +  
  MMETSP1325-20131115|10256_1 387 SGLQETYAYIEQNPHPRLWRLLAEAALNALDLGIADKAFVRCSDYKGIQYVKRLNS 442
                  56889999999**********************************99877655555 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.002
    PF04053.9 365 laeeayqkakdfdkLllLylst.gnkekLkkLakiaeekgdlniafqaalllgdvekcvdlLiksgrlpeAalfAkty 441
                     e+y + +df++L  + +++   +  L  +a++ e+ g +  a  ++l  gdv++ +d  +  ++   A+ +A+++
  MMETSP1325-20131115|10256_1 535 KMAECYYRLEDFNSLQKMVSMVpPGTPLLTTMAQMFESVGIHETATDCYLKAGDVRAGIDCCVLLNQWDRAVSLAEQH 612
                  456788888888888755555415677888888888888888888888888888888888888888888888887766 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.47   1.3e+03       8      24 ..     466     482 ..     461     493 .. 0.82
   2 !    8.7   0.1   0.00053       1.5       2      24 ..     507     529 ..     506     545 .. 0.90
   3 ?    1.4   0.0      0.12   3.2e+02       2      29 ..     563     588 ..     562     593 .. 0.86
   4 ?    2.5   0.0     0.051   1.4e+02       8      24 ..     595     611 ..     594     624 .. 0.86
   5 ?   -0.3   0.1      0.41   1.1e+03      18      27 ..     637     644 ..     625     668 .. 0.67

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.47
    PF13176.1   8 lysrlgdyekAielyer 24 
                  +y++  + + Ai+l er
  MMETSP1325-20131115|10256_1 466 IYRDIDRKDLAIDLRER 482
                  78888888889999998 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00053
    PF13176.1   2 llnLarlysrlgdyekAielyer 24 
                  +  +++ y ++ +++kA+ +y++
  MMETSP1325-20131115|10256_1 507 HTKIGDFYAERFNWRKAVMYYQQ 529
                  5679******************9 PP

  == domain 3    score: 1.4 bits;  conditional E-value: 0.12
    PF13176.1   2 llnLarlysrlgdyekAielyeraLalt 29 
                  l  +a++++++g +e+A ++y +  a +
  MMETSP1325-20131115|10256_1 563 LTTMAQMFESVGIHETATDCYLK--AGD 588
                  6679*****************99..766 PP

  == domain 4    score: 2.5 bits;  conditional E-value: 0.051
    PF13176.1   8 lysrlgdyekAielyer 24 
                  +++ l+++++A++l e+
  MMETSP1325-20131115|10256_1 595 CCVLLNQWDRAVSLAEQ 611
                  67889********9888 PP

  == domain 5    score: -0.3 bits;  conditional E-value: 0.41
    PF13176.1  18 AielyeraLa 27 
                  A+ely++  a
  MMETSP1325-20131115|10256_1 637 AVELYRK--A 644
                  6666665..2 PP

>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0         2   5.5e+03      92     113 ..     466     487 ..     452     494 .. 0.76
   2 !   11.4   0.0   5.9e-05      0.16      46     141 ..     534     634 ..     528     636 .. 0.89
   3 ?    2.3   0.1     0.037     1e+02      76     105 ..     624     653 ..     620     668 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 2
                  HH----THHHHSS-SSTT--TT CS
   PF00637.15  92 lykkinefkkaisllkklkdfd 113
                  +y++i++ + ai+l ++ +d+ 
  MMETSP1325-20131115|10256_1 466 IYRDIDRKDLAIDLRERQGDWF 487
                  9999********9977778875 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 5.9e-05
                  HHHHHHHHHTT--HHHHHTTSS---..S-TTHHHHHHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGGTTTTT---...TTHHHHHHHHHHHH-ST CS
   PF00637.15  46 tallelyakyedpekleeflkknnn..ydlekvaklcekadlyeeavilykkinefkkaisllkklkdfddaieyakkasd...pelwekllealldnkkf 141
                  ++++e+y + ed+++l++++++       l ++a++ e+ + +e+a  +y k ++++  i+++  l+++d+a+  a + +    + l++k +++lld++++
  MMETSP1325-20131115|10256_1 534 EKMAECYYRLEDFNSLQKMVSMVPPgtPLLTTMAQMFESVGIHETATDCYLKAGDVRAGIDCCVLLNQWDRAVSLAEQHDYpqiEGLLSKYAKYLLDKGEK 634
                  58999****************66655588999*****************************************9999999955556899999999999876 PP

  == domain 3    score: 2.3 bits;  conditional E-value: 0.037
                  HHHHHHT-SSHHHHHHHH----THHHHSS- CS
   PF00637.15  76 vaklcekadlyeeavilykkinefkkaisl 105
                   ak++ +++   +av+ly+k n+ ++a++l
  MMETSP1325-20131115|10256_1 624 YAKYLLDKGEKLQAVELYRKANKATDAAKL 653
                  567777777666899999999999998885 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   9.3e-05      0.25       6      33 ..     505     532 ..     500     536 .. 0.89
   2 ?    6.1   0.7    0.0034       9.2      30      75 ..     604     647 ..     579     650 .. 0.78
   3 ?   -2.4   0.5       1.6   4.3e+03      46      67 ..     739     760 ..     733     770 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 9.3e-05
    PF13424.1   6 tilnnlalvlrrlgdydeAlelyekale 33 
                  ++++ +++++ +  ++ +A  +y++a +
  MMETSP1325-20131115|10256_1 505 KAHTKIGDFYAERFNWRKAVMYYQQAKQ 532
                  68999********************975 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0034
    PF13424.1  30 kalellrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                  +a+ l+++  +d p++  +l  +a ++l +g+  +A+e+++kA ++
  MMETSP1325-20131115|10256_1 604 RAVSLAEQ--HDYPQIEGLLSKYAKYLLDKGEKLQAVELYRKANKA 647
                  44444322..367788888999999999999999999999999875 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 1.6
    PF13424.1  46 aralnnlanlylalgdydeAle 67 
                  a  ++ la+ +l+ g+ d+A +
  MMETSP1325-20131115|10256_1 739 AYHYYLLAQRQLYNGKMDAAMK 760
                  4557777777777777777655 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       1.7   4.7e+03      32      49 ..     398     414 ..     394     419 .. 0.76
   2 ?   -2.1   0.0      0.99   2.7e+03       6      27 ..     447     468 ..     445     469 .. 0.88
   3 ?    6.8   0.4    0.0017       4.7       5      31 ..     506     532 ..     503     552 .. 0.82
   4 ?   -1.5   0.0      0.65   1.8e+03       8      29 ..     565     586 ..     562     595 .. 0.80
   5 ?    5.5   0.3    0.0041        11      24      64 ..     600     644 ..     599     648 .. 0.82
   6 ?    1.9   0.2     0.057   1.6e+02       3      25 ..     739     761 ..     737     789 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.7
    PF13414.1  32 ldpnnaelyynlAlaylk 49 
                   +p ++ l+  lA a l+
  MMETSP1325-20131115|10256_1 398 QNP-HPRLWRLLAEAALN 414
                  555.89999999998876 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.99
    PF13414.1   6 lkelGnalfkegdydeAieaye 27 
                   k++++++ +  + deA+  y+
  MMETSP1325-20131115|10256_1 447 MKQRAEVAVYFSRIDEAEGIYR 468
                  6899999**********99986 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0017
    PF13414.1   5 alkelGnalfkegdydeAieayekAle 31 
                  a+   G  + ++ ++ +A+ +y++A +
  MMETSP1325-20131115|10256_1 506 AHTKIGDFYAERFNWRKAVMYYQQAKQ 532
                  678889999999999999999999965 PP

  == domain 4    score: -1.5 bits;  conditional E-value: 0.65
    PF13414.1   8 elGnalfkegdydeAieayekA 29 
                   +++++ + g ++ A ++y kA
  MMETSP1325-20131115|10256_1 565 TMAQMFESVGIHETATDCYLKA 586
                  5677777778889999999887 PP

  == domain 5    score: 5.5 bits;  conditional E-value: 0.0041
    PF13414.1  24 eayekAleldpnn..ae...lyynlAlaylklgkdyeeAledyekA 64 
                   ++++A++l +++  ++   l++  A+ +l +g++  +A+e y+kA
  MMETSP1325-20131115|10256_1 600 NQWDRAVSLAEQHdyPQiegLLSKYAKYLLDKGEK-LQAVELYRKA 644
                  57899999976652255999*************86.79*****998 PP

  == domain 6    score: 1.9 bits;  conditional E-value: 0.057
    PF13414.1   3 AealkelGnalfkegdydeAiea 25 
                  A+ ++ l+++ +++g++d A + 
  MMETSP1325-20131115|10256_1 739 AYHYYLLAQRQLYNGKMDAAMKT 761
                  8899***************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (899 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.27u 0.39s 00:00:01.66 Elapsed: 00:00:00.66
# Mc/sec: 3264.13
//
Query:       MMETSP1325-20131115|10266_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.43s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 350.24
//
Query:       MMETSP1325-20131115|10267_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.44s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10260_1  [L=716]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-29  102.1   0.1    3.6e-14   52.3   0.0    2.6  2  PF01380.17 SIS domain
    1.3e-23   83.3   0.1      3e-23   82.1   0.1    1.6  2  PF13522.1  Glutamine amidotransferase domain
      2e-17   62.8   3.7    1.7e-13   49.9   0.7    2.6  3  PF00310.16 Glutamine amidotransferases class-II
    7.6e-17   61.1   0.0    1.3e-16   60.4   0.0    1.4  1  PF13537.1  Glutamine amidotransferase domain
    3.3e-05   22.5   0.2    6.4e-05   21.6   0.1    1.5  1  PF13230.1  Glutamine amidotransferases class-II


Domain annotation for each model (and alignments):
>> PF01380.17  SIS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.3   6.6e-16   1.8e-12       3     129 ..     327     452 ..     325     454 .. 0.91
   2 !   52.3   0.0   1.3e-17   3.6e-14       2     129 ..     504     636 ..     503     638 .. 0.77

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 6.6e-16
                  HTSSEEEEEE---THHHHHHHHHHHHHHHSSEEEEE.EHHHCCHT.TGG-STTCEEEEEE-SCCCHHHHHHHHHHHHTT-EEEEEESTTTSHHHHHSSEEEEEEEEHHCGHHHSHHHHHHHHHHHHHH CS
   PF01380.17   3 skakriylvGaGtsyaiAlelalkleeiggivveve.daselrhgplalvdpddlvilisqsgetkelveaaellkergakiiaitdsansplareadltlyinaepeagvastksltlqlalldala 129
                  +k ++++l G+Gts  + +++a  + e   + ++++ da+e r+   ++ +++  ++++sqsgetk++ +a++ + ++g ++i++ +  +s +ar ++l +y na++e  vastk++t+q ++l +l 
  MMETSP1325-20131115|10260_1 327 AKISTMILAGCGTSLNASMYGAKLMREYEAFDTAMAmDAAEIRAA--DIPSRNAGLLAVSQSGETKDVHRAVVAAENQGLPCISVVNAVGSLIARTTKLGVYCNAGRENAVASTKAFTTQVTVLALLT 452
                  677899*******************99988866665266676766..9***************************************************************************98875 PP

  == domain 2    score: 52.3 bits;  conditional E-value: 1.3e-17
                  HHTSSEEEEEE---THHHHHHHHHHHHHHHSSEEEEEEHHHCCHT.TGG-S......TTCEEEEEE.-SCCCHHHHHHHHHHHHTT-EEEEEESTTTSHHHHHSSEEEEEEEEHHC.GHHHSHHHHHHHHHHHHHH CS
   PF01380.17   2 lskakriylvGaGtsyaiAlelalkleeiggivvevedaselrhgplalvd......pddlvilis.qsgetkelveaaellkergakiiaitdsansplareadltlyinaepea.gvastksltlqlalldala 129
                  ++++++++++G+G+  +iA+e+alk++e ++i++e++  ++l+hgp+al+d        +++i ++   +++ ++  +ae++k+r+a++i+itd+++            + ++++  + a+t +l+lql+++++++
  MMETSP1325-20131115|10260_1 504 IKDKEHLFILGKGYGEPIAYEGALKIKECAYIHAEGYSGGALKHGPFALIDgpdgkfGATPIICLVlDDEYAMQMRTVAEEVKARNAEVIIITDNPKLAEGLDP--SP-VVIPRNGpLTALTAVLPLQLLAYELAL 636
                  57888*********************************************943333336799999956667777888888*************88753322222..22.333333346688888888888888776 PP

>> PF13522.1  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.1   0.1   1.1e-26     3e-23       9     133 .]     101     235 ..      89     235 .. 0.86
   2 ?   -3.4   0.0       2.8   7.8e+03      56     110 ..     458     513 ..     455     523 .. 0.52

  Alignments for each domain:
  == domain 1    score: 82.1 bits;  conditional E-value: 1.1e-26
    PF13522.1   9 lvdsevvlgHvRlatvglseeegaqPfssedgrvvlvhNGeiynyeelreelpakglafrtrsDsevllall...........kewGekalerldgmfafaiwdkrekklllardrlgikpLyygktgdrllfase 133
                  +++ +v+++H+R+at+g +++e a+P++ +++r++lvhNG i n+++lr+el+a+g+ f +++D+ev+++l+           ke   kal+r+dg++ +a++ ++++   +++   +  p+ +g  +++  +ase
  MMETSP1325-20131115|10260_1 101 HTGHHVGIAHTRWATHGGKTDENAHPHTDSKNRIALVHNGVINNANKLRQELQANGIVFTSETDTEVVAKLVgwyldngattvKEATSKALSRCDGTWGIAVMSHSPDDDEVVVA-CNGSPMTIGLGQGKTFIASE 235
                  56778**************77777************************************************99986666555555599999**********9997777777643.56699999998888888887 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 2.8
    PF13522.1  56 lreelpa.kglafrtrsDsevllallkewG.....ekal.erldgmfafaiwdkrekkllla 110
                  lr+e pa  +    +r D+  ll++l++++     ++ + +++++   +a+  k+++ l+++
  MMETSP1325-20131115|10260_1 458 LRDENPAtAR---MGRPDTLELLEALQRLPisfgmANRVrSKVKE---VAARIKDKEHLFIL 513
                  5555555222...23777777777777777664443333244444...44445555555555 PP

>> PF00310.16  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   1.2e-05     0.033       1      51 [.      32      73 ..      32      86 .. 0.92
   2 !   49.9   0.7   6.1e-17   1.7e-13     194     281 ..     103     180 ..      92     193 .. 0.90
   3 ?   -2.2   0.0      0.42   1.2e+03     301     331 ..     232     262 ..     227     267 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.2e-05
                 ---.--EE......CSCCHHHHHCCEGGGTT----TSB..-BE-EEEE--HH CS
   PF00310.16  1 Cgv.GvvadikgkasrkvvekalealerLehRGgvdgntGDgaGilvqipee 51
                 Cg+ Gvv    g+++ +    +le+l+ L+ RG+      D+aGi++ +p +
  MMETSP1325-20131115|10260_1 32 CGIvGVV----GRENDDARGFLLEGLMVLRNRGY------DSAGIATLEPTS 73
                 ******9....***********************......*******99976 PP

  == domain 2    score: 49.9 bits;  conditional E-value: 6.1e-17
                  EECEEEB--C--SSSS-SCTTSSSEE......EEEEE---TTHHHHHHHHHHHCTT.SS....HHHTC..S..TTSHHHHHHHHHHHHHHHH-. CS
   PF00310.16 194 ksalaivHvRfsTntspswenahPfr......vlahNGeintikgnknllkareeslkseefgslkklrPiveenesDseildnvlelltrtgr 281
                    +++i+H+R++T++  + enahP+       +l+hNG in++++++++l+a++ ++ s                e+D+e++++++ +++++g 
  MMETSP1325-20131115|10260_1 103 GHHVGIAHTRWATHGGKTDENAHPHTdsknriALVHNGVINNANKLRQELQANGIVFTS----------------ETDTEVVAKLVGWYLDNGA 180
                  5689*******************************************************................9999999999999999993 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 0.42
                  GTHHHHHHHHHHHHHHHHHC--EEEEEEETT CS
   PF00310.16 301 lspeekafyeylkklmepwdGpaaivftdgk 331
                  + +e +af +y+k+++ + dG   +v+ +g+
  MMETSP1325-20131115|10260_1 232 IASEPAAFNKYTKNFIAMQDGEIGVVAAHGT 262
                  5678899***************999998876 PP

>> PF13537.1  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.0   4.6e-20   1.3e-16       1     123 [.     110     240 ..     110     241 .. 0.90

  Alignments for each domain:
  == domain 1    score: 60.4 bits;  conditional E-value: 4.6e-20
    PF13537.1   1 hrrlai..idseagaqPmvssedgrvvivfnGeiyNykelreeleakgykfrtesDtevllallee.........leggeealkrlnGmfAfalwd..kkekrlllaRDrlGikpLyygkdegdallfaSelkall 123
                  h+r+a+   +++++a+P + ++++r+++v+nG i N ++lr+el+a+g+ f++e+Dtev+++l+            e+  +al+r++G + +a++    +++++++a +     p+ +g  +g + ++aSe+ a+ 
  MMETSP1325-20131115|10260_1 110 HTRWAThgGKTDENAHPHT-DSKNRIALVHNGVINNANKLRQELQANGIVFTSETDTEVVAKLVGWyldngattvKEATSKALSRCDGTWGIAVMShsPDDDEVVVACN---GSPMTIGLGQG-KTFIASEPAAFN 240
                  7788887788999******.58999**************************************9999*******9999****************983345559999988...49*******87.9999***99985 PP

>> PF13230.1  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.1   2.3e-08   6.4e-05      73     132 ..     106     167 ..      56     194 .. 0.73

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 2.3e-08
    PF13230.1  73 nviaHirkatqgkvtleNthPFvrelwgreWifaHnGdLkeyepkllgryepvG.....kTDSEl 132
                    iaH r at+g +t eN hP +  ++ ++  ++HnG +++ ++kl ++ +  G     +TD+E 
  MMETSP1325-20131115|10260_1 106 VGIAHTRWATHGGKTDENAHPHT--DSKNRIALVHNGVINN-ANKLRQELQANGivftsETDTEV 167
                  459******************76..67889*********66.55665555544433333777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (716 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.90u 0.47s 00:00:01.37 Elapsed: 00:00:00.55
# Mc/sec: 3119.62
//
Query:       MMETSP1325-20131115|10265_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       282  (0.0206261); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.70
# Mc/sec: 773.68
//
Query:       MMETSP1325-20131115|10268_1  [L=312]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-05   24.4  29.7      0.001   19.0   3.2    3.8  4  PF07974.8  EGF-like domain
    8.2e-05   22.3  16.9      0.012   15.4   1.3    2.8  3  PF00053.19 Laminin EGF-like (Domains III and V)
  ------ inclusion threshold ------
      0.022   14.6  16.7       0.99    9.3   1.6    3.8  3  PF00008.22 EGF-like domain
      0.028   14.3  14.8      0.056   13.4   5.0    3.3  2  PF12661.2  Human growth factor-like EGF


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   3.2     3e-07     0.001       7      32 .]      27      52 ..      22      52 .. 0.95
   2 !   10.9   1.9    0.0001      0.36       1      15 [.      57      68 ..      57      70 .. 0.89
   3 !    9.4   1.9   0.00031       1.1      21      32 .]      93     104 ..      90     104 .. 0.96
   4 ?   -3.5   0.1       3.3   1.1e+04      12      15 ..     170     173 ..     168     174 .. 0.66

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 3e-07
    PF07974.8  7 iCgghGtCvkqcgkCvCdsgyqGktC 32
                 +C++ G C+++ g C+C +gy G++C
  MMETSP1325-20131115|10268_1 27 ECSNKGLCDRDSGLCECFAGYDGASC 52
                 5************************* PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.0001
    PF07974.8  1 CsadgliCgghGtCv 15
                 C++d   C+ghGtC+
  MMETSP1325-20131115|10268_1 57 CPED---CSGHGTCE 68
                 9975...*******8 PP

  == domain 3    score: 9.4 bits;  conditional E-value: 0.00031
    PF07974.8  21 CvCdsgyqGktC 32 
                  C+Cd gy+G++C
  MMETSP1325-20131115|10268_1  93 CSCDPGYTGPSC 104
                  ************ PP

  == domain 4    score: -3.5 bits;  conditional E-value: 3.3
    PF07974.8  12 GtCv 15 
                  GtC 
  MMETSP1325-20131115|10268_1 170 GTCS 173
                  6775 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   4.5     3e-05       0.1       3      33 ..      28      54 ..      26      58 .. 0.87
   2 !   15.4   1.3   3.4e-06     0.012       3      35 ..      57     110 ..      56     116 .. 0.83
   3 ?   -2.7   0.0       1.6   5.3e+03      10      15 ..     169     174 ..     164     200 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3e-05
                 STT-B-CC--B-S----BSBSTTEE---S-E CS
   PF00053.19  3 CnphgsssssCdsstgqClCkenveGrkCdr 33
                 C+++g     Cd+ +g C+C  +++G  C+r
  MMETSP1325-20131115|10268_1 28 CSNKG----LCDRDSGLCECFAGYDGASCQR 54
                 55555....9*******************97 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 3.4e-06
                  STT-B-CC--B-S...................----BSBSTTEE---S..-EE- CS
   PF00053.19   3 CnphgsssssCds...................stgqClCkenveGrkC..drCk 35 
                  C++  s +++C+                    +t+ C+C ++++G+ C   +Ck
  MMETSP1325-20131115|10268_1  57 CPEDCSGHGTCEHietlaandyenvyaiwdsgMTMGCSCDPGYTGPSCavKECK 110
                  55555556699999999999999*******9*****************444666 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 1.6
                  C--B-S CS
   PF00053.19  10 sssCds 15 
                  +++C +
  MMETSP1325-20131115|10268_1 169 TGTCSQ 174
                  355555 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.6   0.00029      0.99       6      30 ..      28      49 ..      22      51 .. 0.75
   2 ?    6.6   0.6     0.002       6.8       1      15 [.      57      70 ..      57      79 .. 0.77
   3 ?    7.0   0.4    0.0014       4.9      22      31 ..      93     102 ..      89     103 .. 0.93

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00029
                 CSS--EEEEECCTEEEEE--TTCTT CS
   PF00008.22  6 CsngGtCvdtpgggytCeCpeGytG 30
                 Csn G C +    +  CeC  Gy+G
  MMETSP1325-20131115|10268_1 28 CSNKGLCDRD---SGLCECFAGYDG 49
                 6666666555...59*********9 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.002
                 TTTTTCSS--EEEEE CS
   PF00008.22  1 CspnpCsngGtCvdt 15
                 C++  Cs++GtC   
  MMETSP1325-20131115|10268_1 57 CPE-DCSGHGTCEHI 70
                 555.9*******876 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.0014
                  EE--TTCTTT CS
   PF00008.22  22 CeCpeGytGk 31 
                  C C +GytG+
  MMETSP1325-20131115|10268_1  93 CSCDPGYTGP 102
                  *********7 PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.6     0.015        51       2      13 .]      41      52 ..      40      52 .. 0.93
   2 ?   13.4   5.0   1.6e-05     0.056       2      13 .]      93     104 ..      92     104 .. 0.98

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.015
    PF12661.2  2 CqCppGyTGdnC 13
                 C+C +Gy G+ C
  MMETSP1325-20131115|10268_1 41 CECFAGYDGASC 52
                 **********99 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 1.6e-05
    PF12661.2   2 CqCppGyTGdnC 13 
                  C C+pGyTG+ C
  MMETSP1325-20131115|10268_1  93 CSCDPGYTGPSC 104
                  **********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       458  (0.0334991); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 1525.84
//
Query:       MMETSP1325-20131115|10264_1  [L=471]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       714  (0.0522235); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.86u 0.40s 00:00:01.26 Elapsed: 00:00:00.57
# Mc/sec: 1946.01
//
Query:       MMETSP1325-20131115|10271_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.045   13.6   2.3        6.1    7.1   0.1    2.5  2  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0009        12       5      19 ..      12      27 ..      10      30 .. 0.88
   2 ?    7.1   0.1   0.00044       6.1       4      22 .]      36      56 ..      35      62 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0009
                 EEETSSBCB.CHHHHH CS
   PF00560.28  5 LdLsgNnlt.slppsl 19
                 L L++N ++ slp+++
  MMETSP1325-20131115|10271_1 12 LRLNNNTFSgSLPSEI 27
                 89***********976 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.00044
                 EEEETSSBCBC..HHHHHHHH CS
   PF00560.28  4 eLdLsgNnlts..lppslsnL 22
                 +L++++N +++  +p  l++L
  MMETSP1325-20131115|10271_1 36 YLYMNNNMFSCsdIPTQLQAL 56
                 89*****99966977665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 345.63
//
Query:       MMETSP1325-20131115|10270_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-09   36.7   3.2    4.4e-09   35.9   2.2    1.4  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   2.2   3.2e-13   4.4e-09       4      31 .]      65      91 ..      63      91 .. 0.92

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 3.2e-13
                 SEEE.E.E----EEEEETTT--EESS-- CS
   PF00397.21  4 gWeersddddGrvYYyNheTgetqWekP 31
                  W+e+++dd G+vY++N+ T et+W+kP
  MMETSP1325-20131115|10270_1 65 TWVEHTTDD-GQVYFHNTLTDETSWTKP 91
                 4**999988.*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 450.35
//
Query:       MMETSP1325-20131115|10273_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.60
# Mc/sec: 371.44
//
Query:       MMETSP1325-20131115|10272_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.33s 00:00:00.60 Elapsed: 00:00:00.50
# Mc/sec: 191.71
//
Query:       MMETSP1325-20131115|10269_1  [L=510]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00074   19.0   0.0      0.015   15.0   0.0    2.5  2  PF13405.1  EF-hand domain
     0.0047   16.0   0.0      0.026   13.6   0.0    2.2  2  PF00036.27 EF hand
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.031   14.3   0.0    1.7  1  PF13499.1  EF-hand domain pair
       0.13   11.5   0.9       0.62    9.3   0.0    2.5  3  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.13   4.5e+02       6      27 ..       6      32 ..       3      38 .. 0.76
   2 !   15.0   0.0   4.5e-06     0.015       2      26 ..      50      74 ..      49      79 .. 0.91

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.13
                 -GCC---.....----B---HHHHHHH CS
    PF13405.1  6 FklfDkd.....gdGkidaeELrdaLr 27
                 F ++D d      + ++++ EL  ++r
  MMETSP1325-20131115|10269_1  6 FSKIDGDakspnSNSTLTRMELSEVMR 32
                 778888866664555999999999998 PP

  == domain 2    score: 15.0 bits;  conditional E-value: 4.5e-06
                 HH---GCC-------B---HHHHHH CS
    PF13405.1  2 lreaFklfDkdgdGkidaeELrdaL 26
                 +r++ +l+D d++G++d++EL  +L
  MMETSP1325-20131115|10269_1 50 IRKLVRLLDPDRSGEVDIDELFVFL 74
                 79999****************7776 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.54   1.8e+03      12      28 ..      17      33 ..      16      34 .. 0.78
   2 !   13.6   0.0   7.7e-06     0.026       2      25 ..      50      73 ..      49      75 .. 0.89

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.54
                 TTSSEBEHHHHHHHHHH CS
   PF00036.27 12 DgdGkIsfeEfkealkk 28
                 + + +++  E+ e+++ 
  MMETSP1325-20131115|10269_1 17 NSNSTLTRMELSEVMRL 33
                 66778899999999975 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 7.7e-06
                 HHHHHHHHCTTTSSEBEHHHHHHH CS
   PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkea 25
                 ++++ +++D D++G ++ +E+  +
  MMETSP1325-20131115|10269_1 50 IRKLVRLLDPDRSGEVDIDELFVF 73
                 68999***************9766 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     9e-06     0.031      12      63 ..      17      71 ..       6      74 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 9e-06
    PF13499.1 12 dgdgyldkeeLlrllkhlgsels...deevre.vldyifkelDkngdGvlsfeEfl 63
                 + + +l++ eL ++++ +   l+   + ++ + +++++++ lD +++G ++ +E+ 
  MMETSP1325-20131115|10269_1 17 NSNSTLTRMELSEVMRLFRKVLKippH-SIADvSIRKLVRLLDPDRSGEVDIDELF 71
                 568899999999999998755557753.3333477777****************97 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       0.5   1.7e+03       4      11 ..       5      12 ..       3      12 .. 0.82
   2 ?   -2.4   0.0      0.93   3.2e+03      15      25 .]      21      31 ..      21      31 .. 0.84
   3 ?    9.3   0.0   0.00018      0.62       2      21 ..      51      70 ..      50      74 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.5
                 HHHHH--S CS
    PF13202.1  4 tFrafDlN 11
                 +F+++D +
  MMETSP1325-20131115|10269_1  5 WFSKIDGD 12
                 8*****76 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 0.93
                 -B-HHHHHHHH CS
    PF13202.1 15 kIsreELkrlv 25
                 +++r EL++++
  MMETSP1325-20131115|10269_1 21 TLTRMELSEVM 31
                 689****9975 PP

  == domain 3    score: 9.3 bits;  conditional E-value: 0.00018
                 HHHHHHH--S----B-HHHH CS
    PF13202.1  2 kdtFrafDlNgDGkIsreEL 21
                 +++ r +D +++G ++++EL
  MMETSP1325-20131115|10269_1 51 RKLVRLLDPDRSGEVDIDEL 70
                 677799*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       682  (0.049883); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.87u 0.42s 00:00:01.29 Elapsed: 00:00:00.64
# Mc/sec: 1909.60
//
Query:       MMETSP1325-20131115|10275_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-45  155.0   0.0      2e-45  154.8   0.0    1.0  1  PF00225.18 Kinesin motor domain
     0.0026   16.9   0.1       0.75    8.8   0.1    2.2  2  PF02562.11 PhoH-like protein


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.8   0.0   2.9e-49     2e-45      57     216 ..       2     159 ..       1     160 [] 0.92

  Alignments for each domain:
  == domain 1    score: 154.8 bits;  conditional E-value: 2.9e-49
                  HHHHHHHHHHHHHHH----EEEEEE--TT---HHHHH-.TTTTC---HHHHHHHHHHHHHCCTTTHTEEEEEEEEEEEEETTEEEETTSTTT..TS-SS.BEEEECTTTCCEEECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEE CS
   PF00225.18  57 evyeelakplvesvleGynvtifaYGqtgsGKTytmeGkeeeeekGiipraleelFeeieeekeekekefsvkvsylEiYnekiyDLLesek..ekkkkklkiredskkgkvyvkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitle 216
                  ev+ee+ ++l++svl+Gynv++faYGqtgsGKT+tm+G    +++G++pr++ +lF++i e + +  ++++v+  +lE+Yn+ ++DL  + +  + +  kl+i+ d++++ v++k+   ++v + +e+ +l+++g++ r+v++tk+n++SSRSH+if i +e
  MMETSP1325-20131115|10275_1   2 EVFEET-ESLIDSVLDGYNVCVFAYGQTGSGKTWTMTGGGGADNAGLTPRSMTTLFTRIGEMSRT--EDVQVSSYFLELYNDGLVDLYFKLDnpRGEAPKLDIKLDANRQ-VFIKNAVVKPVGTEDELAQLFQNGNAMRHVGATKMNAASSRSHSIFAIMVE 159
                  678885.99******************************99999***************997766..889*****************9877644455559********87.************************************************986 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1   0.00011      0.75      18      35 ..      18      35 ..       5      40 .. 0.78
   2 !    6.2   0.0    0.0007       4.8     131     175 ..      47      89 ..      42     116 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00011
   PF02562.11 18 kndivfaiGpaGtGKTyl 35
                  n  vfa G++G+GKT+ 
  MMETSP1325-20131115|10275_1 18 YNVCVFAYGQTGSGKTWT 35
                 45689***********95 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0007
   PF02562.11 131 ttkeqmkmfltRlgenskvvvtGditqidlpke.eksGlaealevl 175
                  +t+++m ++ tR+ge s+   t d++      e +++Gl+++  +l
  MMETSP1325-20131115|10275_1  47 LTPRSMTTLFTRIGEMSR---TEDVQVSSYFLElYNDGLVDLYFKL 89 
                  6899*************9...5676666666555677776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 723.43
//
Query:       MMETSP1325-20131115|10277_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 542.57
//
Query:       MMETSP1325-20131115|10279_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.037   13.5   2.5        3.6    7.1   0.0    2.6  2  PF14373.1 Superinfection immunity protein


Domain annotation for each model (and alignments):
>> PF14373.1  Superinfection immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0   0.00026       3.6      30      42 ..      49      61 ..      48      62 .. 0.91
   2 ?    5.3   0.6   0.00097        13      32      42 ..      67      77 ..      66      78 .. 0.92

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00026
    PF14373.1 30 TgiGWivalvwAl 42
                 +gi+W++ l+w+l
  MMETSP1325-20131115|10279_1 49 SGIPWLAELIWSL 61
                 69*********98 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.00097
    PF14373.1 32 iGWivalvwAl 42
                 iGW ++ +wA+
  MMETSP1325-20131115|10279_1 67 IGWMAVVAWAR 77
                 9*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 822.28
//
Query:       MMETSP1325-20131115|10274_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-25   86.7  15.9    7.6e-25   86.3   9.1    1.9  2  PF01907.14 Ribosomal protein L37e
     0.0021   17.7   1.3     0.0033   17.0   0.9    1.3  1  PF12773.2  Double zinc ribbon
     0.0054   16.3   0.9     0.0076   15.8   0.6    1.2  1  PF06221.8  Putative zinc finger motif, C2HC5-type
     0.0088   15.1   3.1       0.02   13.9   2.1    1.6  1  PF13248.1  zinc-ribbon domain
  ------ inclusion threshold ------
       0.03   13.8   0.7       0.05   13.1   0.5    1.6  1  PF01641.13 SelR domain
      0.046   13.5   2.0      0.086   12.6   1.4    1.4  1  PF12172.3  Rubredoxin-like zinc ribbon domain (DUF35_N)
      0.067   12.5   4.4        3.6    7.0   0.1    2.2  2  PF13240.1  zinc-ribbon domain
       0.44   10.2   2.3        6.5    6.5   0.1    2.3  2  PF14149.1  YhfH-like protein
       0.89    9.1   3.5        0.7    9.4   1.4    1.6  1  PF10892.3  Protein of unknown function (DUF2688)
        2.1    8.6   6.4        2.3    8.5   2.3    2.0  2  PF10235.4  Microtubule-associated protein CRIPT


Domain annotation for each model (and alignments):
>> PF01907.14  Ribosomal protein L37e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   9.1   5.6e-28   7.6e-25       1      55 []       2      55 ..       2      55 .. 0.97
   2 ?    1.2   0.0      0.21   2.9e+02      21      38 ..      61      78 ..      56      84 .. 0.72

  Alignments for each domain:
  == domain 1    score: 86.3 bits;  conditional E-value: 5.6e-28
   PF01907.14  1 skGTpSfGkrnkkthtlCrrCGrrsyhvqkkrCasCGfpaakkrrsYnWskKakr 55
                 +kGT+SfGkr++ktht+CrrCG+ s+h qkk+C+sCG+p ak+  ++nW +K+kr
  MMETSP1325-20131115|10274_1  2 TKGTSSFGKRHSKTHTTCRRCGKVSFHLQKKVCSSCGYPGAKMK-RFNWGEKSKR 55
                 7***************************************9998.*******986 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.21
   PF01907.14 21 CGrrsyhvqkkrCasCGf 38
                 +Gr sy ++ +r  + Gf
  MMETSP1325-20131115|10274_1 61 TGRMSYMKTVSRRFKNGF 78
                 799999988776666665 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.9   2.4e-06    0.0033       9      38 ..      13      40 ..       6      47 .. 0.60

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 2.4e-06
    PF12773.2  9 psgarfCpqCgaklkeataeevlCpsCges 38
                 +++   C +Cg+     + ++++C+sCg++
  MMETSP1325-20131115|10274_1 13 SKTHTTCRRCGKVSF--HLQKKVCSSCGYP 40
                 455566666666666..5555666666666 PP

>> PF06221.8  Putative zinc finger motif, C2HC5-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.6   5.5e-06    0.0076       9      44 ..       9      40 ..       6      49 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 5.5e-06
    PF06221.8  9 atrHplfeaapnClnCGkiiCekegllgpClfCgsp 44
                 ++rH    + + C  CGk+    ++  + C++Cg p
  MMETSP1325-20131115|10274_1  9 GKRHSK--THTTCRRCGKVSFHLQK--KVCSSCGYP 40
                 778876..7899**********999..8*****977 PP

>> PF13248.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   2.1   1.5e-05      0.02       3      25 ..      17      40 ..      15      40 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.5e-05
    PF13248.1  3 vtCPnCGavlevd..akFCpnCGap 25
                  tC  CG+v ++    k+C++CG+p
  MMETSP1325-20131115|10274_1 17 TTCRRCGKV-SFHlqKKVCSSCGYP 40
                 69******8.88888********98 PP

>> PF01641.13  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.5   3.6e-05      0.05      24      62 ..       3      41 ..       1      83 [. 0.88

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.6e-05
                 TT-STTTS------EEETT---EEE-CCCS--S-----E CS
   PF01641.13 24 pftgeykkkkeeGiyvcivcgeplfkskdkfdsgcGWPs 62
                 ++t+++ k++++   +c  cg+  f+ ++k  s cG+P 
  MMETSP1325-20131115|10274_1  3 KGTSSFGKRHSKTHTTCRRCGKVSFHLQKKVCSSCGYPG 41
                 56889999999999************************6 PP

>> PF12172.3  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.4   6.3e-05     0.086      14      32 ..      19      38 ..      17      42 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 6.3e-05
    PF12172.3 14 CreCGrvqfPPr.avCpnCg 32
                 Cr CG+v f+ +  vC++Cg
  MMETSP1325-20131115|10274_1 19 CRRCGKVSFHLQkKVCSSCG 38
                 *******************7 PP

>> PF13240.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1    0.0026       3.6       6      21 ..       9      24 ..       9      26 .. 0.82
   2 ?    7.0   0.6    0.0027       3.7      14      22 ..      32      40 ..      26      41 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0026
    PF13240.1  6 GaeledgakFCpyCGt 21
                 G+  +++ ++C +CG+
  MMETSP1325-20131115|10274_1  9 GKRHSKTHTTCRRCGK 24
                 6667788899****98 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0027
    PF13240.1 14 kFCpyCGtp 22
                 k C+ CG+p
  MMETSP1325-20131115|10274_1 32 KVCSSCGYP 40
                 56*****98 PP

>> PF14149.1  YhfH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.2     0.043        59      15      21 ..      18      24 ..      13      26 .. 0.86
   2 ?    6.5   0.1    0.0048       6.5      11      20 ..      29      38 ..      27      42 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.043
    PF14149.1 15 kCteCGk 21
                 +C  CGk
  MMETSP1325-20131115|10274_1 18 TCRRCGK 24
                 7999998 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0048
    PF14149.1 11 LPkKkCteCG 20
                 L kK C+ CG
  MMETSP1325-20131115|10274_1 29 LQKKVCSSCG 38
                 889******* PP

>> PF10892.3  Protein of unknown function (DUF2688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.4   0.00052       0.7      10      23 ..      16      29 ..       9      36 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00052
    PF10892.3 10 etnCRRCGksirtL 23
                  t+CRRCGk    L
  MMETSP1325-20131115|10274_1 16 HTTCRRCGKVSFHL 29
                 699******76555 PP

>> PF10235.4  Microtubule-associated protein CRIPT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.3    0.0017       2.3      40      66 ..      12      39 ..       3      45 .. 0.81
   2 ?    1.3   0.0      0.28   3.8e+02      16      45 ..      54      83 ..      42      93 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0017
    PF10235.4 40 yaaysskckiC.ktkveqgskyCqkCaY 66
                  +++ ++c++C k + + ++k C++C Y
  MMETSP1325-20131115|10274_1 12 HSKTHTTCRRCgKVSFHLQKKVCSSCGY 39
                 5677899****5556777********99 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.28
    PF10235.4 16 knsatlgktkisknkllskkaknpyaayss 45
                 k+  t+g+  +s  k +s++ kn + ++++
  MMETSP1325-20131115|10274_1 54 KRRRTTGTGRMSYMKTVSRRFKNGFRENTT 83
                 677888888999999999999988877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      464  (0.033938); expected 273.4 (0.02)
Passed Vit filter:                        74  (0.00541252); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.57
# Mc/sec: 392.51
//
Query:       MMETSP1325-20131115|10282_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-10   37.9  15.6    1.8e-06   27.2   2.5    3.2  3  PF07699.8  GCC2 and GCC3
    0.00046   19.7   3.6    0.00046   19.7   2.5    3.2  3  PF07562.9  Nine Cysteines Domain of family 3 GPCR
  ------ inclusion threshold ------
      0.017   15.0  13.7       0.12   12.3   2.0    3.3  3  PF00020.13 TNFR/NGFR cysteine-rich region
      0.019   13.4  11.8      0.022   13.3   8.2    1.1  1  PF03302.8  Giardia variant-specific surface protein
        6.1    6.3  13.6         15    5.1   0.1    4.0  4  PF13878.1  zinc-finger of acetyl-transferase ESCO


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   2.5   6.7e-10   1.8e-06       7      37 ..       9      39 ..       4      44 .. 0.84
   2 !   18.5   1.7   3.4e-07   0.00094       1      33 [.      36      75 ..      36      76 .. 0.93
   3 ?    0.3   0.0      0.17   4.7e+02      30      40 ..      78      88 ..      77      94 .. 0.76

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 6.7e-10
    PF07699.8  7 gnkkCepCprGtYkneegqkkCiaCppgttT 37
                 g+  C pC+ G Y++e+gq++C aC +g + 
  MMETSP1325-20131115|10282_1  9 GQASCAPCEAGKYSDETGQNECDACEDGESS 39
                 6789***********************9653 PP

  == domain 2    score: 18.5 bits;  conditional E-value: 3.4e-07
    PF07699.8  1 GtylkkgnkkCepCprGtY.......kneegqkkCiaCpp 33
                 G+ +++g+ +C +C +G Y         ++g++ C++Cp 
  MMETSP1325-20131115|10282_1 36 GESSSSGSTTCDLCLEGHYfprvdggTYTTGNQHCTECPE 75
                 78899999***********999999999**********95 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.17
    PF07699.8 30 aCppgttTskk 40
                 +Cp+  +T+ +
  MMETSP1325-20131115|10282_1 78 KCPRDGITLDT 88
                 79999999754 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   2.5   1.7e-07   0.00046      27      53 ..      12      38 ..       2      39 .. 0.92
   2 !   11.6   2.1   5.7e-05      0.16      27      52 ..      29      53 ..      29      55 .. 0.91
   3 ?    3.5   0.8     0.019        51      39      50 ..      64      75 ..      59      79 .. 0.75

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.7e-07
    PF07562.9 27 dCvpCpegeisnetdettCkkCpeeqw 53
                 +C pC++g++s+et++ +C +C++++ 
  MMETSP1325-20131115|10282_1 12 SCAPCEAGKYSDETGQNECDACEDGES 38
                 6**********************9875 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 5.7e-05
    PF07562.9 27 dCvpCpegeisnetdettCkkCpeeq 52
                 +C  C++ge s+ +++ttC  C e++
  MMETSP1325-20131115|10282_1 29 ECDACEDGESSS-SGSTTCDLCLEGH 53
                 6********999.88*******9987 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.019
    PF07562.9 39 etdettCkkCpe 50
                 +t++ +C++Cpe
  MMETSP1325-20131115|10282_1 64 TTGNQHCTECPE 75
                 347889999987 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.0   4.3e-05      0.12       1      24 [.      16      36 ..      16      47 .. 0.77
   2 ?    2.1   0.1     0.069   1.9e+02      18      26 ..      46      54 ..      39      57 .. 0.79
   3 ?    7.1   0.5    0.0018         5       4      22 ..      61      74 ..      59      85 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 4.3e-05
                 C-TTEEEESSCSEEEEEEE-B-TT CS
   PF00020.13  1 CeegtYtdsknhrqClsCskCepg 24
                 Ce g+Y+d++++++C++C   e g
  MMETSP1325-20131115|10282_1 16 CEAGKYSDETGQNECDAC---EDG 36
                 *********999888555...444 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.069
                 EE-B-TTCE CS
   PF00020.13 18 CskCepgtv 26
                 C +C +g++
  MMETSP1325-20131115|10282_1 46 CDLCLEGHY 54
                 899998876 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.0018
                 TEEEESSCSEEEEEEE-B- CS
   PF00020.13  4 gtYtdsknhrqClsCskCe 22
                 gtYt   n  +C++C   +
  MMETSP1325-20131115|10282_1 61 GTYTT-GN-QHCTEC---P 74
                 79999.66.889777...3 PP

>> PF03302.8  Giardia variant-specific surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   8.2   7.9e-06     0.022      85     167 ..       5      88 ..       1      94 [. 0.79

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 7.9e-06
    PF03302.8  85 ktcedkgqlkacddGfyks...gdacspcdesvktcsagtasdcteclaGkvlkygndgtkgtcGegcatgtgaGacktcGltidG 167
                  +    ++++  c+ G y +    ++c +c++   ++s++t   c  cl G+ +   + gt +t  + c++     +c   G+t+d 
  MMETSP1325-20131115|10282_1   5 QSVIGQASCAPCEAGKYSDetgQNECDACEDGESSSSGST--TCDLCLEGHYFPRVDGGTYTTGNQHCTECPEFAKCPRDGITLDT 88 
                  55667999*********86222468999999877777665..6889******999888888888888888888889*999999986 PP

>> PF13878.1  zinc-finger of acetyl-transferase ESCO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.026        71       8      20 ..       5      17 ..       3      22 .. 0.90
   2 ?    1.9   0.3     0.054   1.5e+02      11      20 ..      25      34 ..      18      34 .. 0.83
   3 ?    4.1   0.1     0.011        31       9      19 ..      39      49 ..      36      50 .. 0.81
   4 ?    5.1   0.1    0.0055        15       6      19 ..      60      73 ..      57      74 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.026
    PF13878.1  8 qkdfgrttCstCg 20
                 q+ +g+  C+ C+
  MMETSP1325-20131115|10282_1  5 QSVIGQASCAPCE 17
                 9999********6 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.054
    PF13878.1 11 fgrttCstCg 20
                 +g+++C+ C+
  MMETSP1325-20131115|10282_1 25 TGQNECDACE 34
                 6999*****5 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.011
    PF13878.1  9 kdfgrttCstC 19
                 +++g+ttC+ C
  MMETSP1325-20131115|10282_1 39 SSSGSTTCDLC 49
                 4579******9 PP

  == domain 4    score: 5.1 bits;  conditional E-value: 0.0055
    PF13878.1  6 lGqkdfgrttCstC 19
                  G  ++g+++C++C
  MMETSP1325-20131115|10282_1 60 GGTYTTGNQHCTEC 73
                 577789******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|10284_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 169.15
//
Query:       MMETSP1325-20131115|10276_1  [L=383]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-16   59.0  10.6    2.4e-10   40.6   1.0    4.2  4  PF08238.7  Sel1 repeat
    1.1e-10   41.0   5.5    1.1e-10   41.0   3.8    2.4  2  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    2.4e-10   39.8   6.9    2.4e-10   39.8   4.8    2.4  2  PF13639.1  Ring finger domain
    5.2e-10   38.7   5.2    5.2e-10   38.7   3.6    2.8  3  PF13920.1  Zinc finger, C3HC4 type (RING finger)
      4e-09   35.8   6.2      4e-09   35.8   4.3    2.3  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    3.5e-08   33.0  17.2    3.5e-08   33.0  11.9    2.5  2  PF01753.13 MYND finger
      0.004   16.6   3.9     0.0055   16.1   1.9    1.9  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
  ------ inclusion threshold ------
        2.8    7.3   8.3        0.4   10.0   0.6    2.6  2  PF03854.9  P-11 zinc finger
        4.1    7.4   5.6        3.9    7.5   0.7    3.3  4  PF07719.12 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.9   4.3e+03      27      39 .]     227     239 ..     219     239 .. 0.86
   2 !    7.7   0.9    0.0033       5.1       6      39 .]     245     275 ..     241     275 .. 0.87
   3 !   40.6   1.0   1.5e-13   2.4e-10       3      39 .]     278     311 ..     276     311 .. 0.92
   4 !   13.1   0.0   6.6e-05       0.1       7      39 .]     318     347 ..     316     347 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 2.9
    PF08238.7  27 AleWyekAAeqGh 39 
                  A+  ++ A +qGh
  MMETSP1325-20131115|10276_1 227 AVVMFQEAMDQGH 239
                  7788999*9**99 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0033
    PF08238.7   6 nLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                  + G  ++++ G  Gv  d+ +A+  y+  Ae+G+
  MMETSP1325-20131115|10276_1 245 AVG--GIFYFGH-GVAIDYPRAMAAYKVGAEAGD 275
                  678..7778**8.9*****************996 PP

  == domain 3    score: 40.6 bits;  conditional E-value: 1.5e-13
    PF08238.7   3 AqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                   q++LG   my++G+ Gv  d+e+A+ W+ekAA+q+h
  MMETSP1325-20131115|10276_1 278 CQFALG--IMYYKGR-GVAVDYEQARAWFEKAAAQDH 311
                  59****..6667**9.9******************98 PP

  == domain 4    score: 13.1 bits;  conditional E-value: 6.6e-05
    PF08238.7   7 LGlyymylnGlgGvpkdpekAleWyekAAeqGh 39 
                  LG   my+ G  Gv++  ++A+e+y+ + ++G+
  MMETSP1325-20131115|10276_1 318 LG--SMYHQGH-GVTPSWRRARELYKSSIQLGN 347
                  99..999***8.9***9*********9999997 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   5.0       0.5   7.6e+02       5      41 ..      75     114 ..      71     117 .. 0.69
   2 !   41.0   3.8   7.4e-14   1.1e-10       3      45 ..     138     180 ..     136     181 .. 0.91

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.5
    PF13923.1   5 CpiCleelenpviltpCgHl.yC.kkCieqwleks..kkkC 41 
                  C  C  e      +t+C+ + yC +kC + ++++   kk C
  MMETSP1325-20131115|10276_1  75 CANCDAEGATR-KCTQCRAVvYCdEKCQKMHWRHGghKKAC 114
                  66676666555.58****9889*558877766654555555 PP

  == domain 2    score: 41.0 bits;  conditional E-value: 7.4e-14
    PF13923.1   3 fsCpiCleelenpviltpCgHlyCkkCieqwleks.kkkCPiCr 45 
                  + C iCle +++p+  +pCgH++C  C++++  k  +++CP+Cr
  MMETSP1325-20131115|10276_1 138 DRCLICLEPPREPT-RLPCGHSFCTGCVSELRAKGvSETCPLCR 180
                  67***********5.6**************999978889****9 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.9   5.3         9   1.4e+04       3      32 ..      87     103 ..      73     131 .. 0.53
   2 !   39.8   4.8   1.6e-13   2.4e-10       2      45 ..     139     181 ..     138     182 .. 0.90

  Alignments for each domain:
  == domain 1    score: -5.9 bits;  conditional E-value: 9
    PF13639.1   3 CaiCldelsegeevvrlpCgHv.fH.eeClde 32 
                  C+               +C+ v ++ e+C + 
  MMETSP1325-20131115|10276_1  87 CT---------------QCRAVvYCdEKCQKM 103
                  22...............344322442334333 PP

  == domain 2    score: 39.8 bits;  conditional E-value: 1.6e-13
    PF13639.1   2 eCaiCldelsegeevvrlpCgHvfHeeCldewlrs..snsCPlCrk 45 
                   C iCl++    +e++rlpCgH f+  C++e+  +  s +CPlCr+
  MMETSP1325-20131115|10276_1 139 RCLICLEPP---REPTRLPCGHSFCTGCVSELRAKgvSETCPLCRA 181
                  6*******9...89*****************99774468******7 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   7.3       4.2   6.4e+03       4      28 ..      74      98 ..      71     116 .. 0.64
   2 ?   -3.5   0.1       5.2     8e+03      19      27 ..     124     132 ..     122     135 .. 0.70
   3 !   38.7   3.6   3.4e-13   5.2e-10       3      45 ..     138     181 ..     136     184 .. 0.94

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 4.2
    PF13920.1  4 tCvvClereadvlllpCgHlclCee 28
                  C  C  + a+  +++C+ ++ C e
  MMETSP1325-20131115|10276_1 74 RCANCDAEGATRKCTQCRAVVYCDE 98
                 5777777777777777777777754 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 5.2
    PF13920.1  19 pCgHlclCe 27 
                  + +H+ lC 
  MMETSP1325-20131115|10276_1 124 HAQHQRLCR 132
                  557888886 PP

  == domain 3    score: 38.7 bits;  conditional E-value: 3.4e-13
    PF13920.1   3 ktCvvClereadvlllpCgHlclCeeCaerllk..rkkkCpiCrs 45 
                  + C +Cle +++ + lpCgH  +C  C+++l+    + +Cp+Cr+
  MMETSP1325-20131115|10276_1 138 DRCLICLEPPREPTRLPCGHS-FCTGCVSELRAkgVSETCPLCRA 181
                  78*******************.*********889**********7 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.6   4.7         9   1.4e+04       1      32 [.      75     107 ..      75     116 .. 0.54
   2 !   35.8   4.3   2.6e-12     4e-09       1      41 []     140     179 ..     140     179 .. 0.96

  Alignments for each domain:
  == domain 1    score: -6.6 bits;  conditional E-value: 9
                  -TTTSSS-SSEE.BSCTS-E.E-.CHHHHHHHCS CS
   PF00097.20   1 CpiCleeakepnelleCkHs.fC.skCirkilks 32 
                  C+ C  e ++ +  ++C+   +C +kC + +++ 
  MMETSP1325-20131115|10276_1  75 CANCDAEGATRK-CTQCRAVvYCdEKCQKMHWRH 107
                  555555555555.666665555634676666665 PP

  == domain 2    score: 35.8 bits;  conditional E-value: 2.6e-12
                  -TTTSSS-SSEE.BSCTS-EE-CHHHHHHHCST-----TTT CS
   PF00097.20   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                  C iCle + ep+  l+C+HsfC+ C+++++ +  +++CPlC
  MMETSP1325-20131115|10276_1 140 CLICLEPPREPT-RLPCGHSFCTGCVSELRAKGVSETCPLC 179
                  99**********.******************888888**** PP

>> PF01753.13  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0  11.9   2.3e-11   3.5e-08       1      40 []      75     114 ..      75     114 .. 0.93
   2 ?   -6.1   4.4         9   1.4e+04       1      19 [.     160     180 ..     129     183 .. 0.65

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 2.3e-11
                  -TTT--.B----EE----S--EESSHHHHHHHHHH..HTTTH CS
   PF01753.13   1 CavCgkaealkllrCsgCksvkYCskeCQradwke..HkkeC 40 
                  Ca+C+ + a++  +C++C++v YC+++CQ+ +w+   Hkk C
  MMETSP1325-20131115|10276_1  75 CANCDAEGATR--KCTQCRAVVYCDEKCQKMHWRHggHKKAC 114
                  ******99999..********************6445****9 PP

  == domain 2    score: -6.1 bits;  conditional E-value: 9
                  -TTT--.....B----EE----S CS
   PF01753.13   1 CavCgk....aealkllrCsgCk 19 
                  C  C +    + + +   C+ C+
  MMETSP1325-20131115|10276_1 160 CTGCVSelraKGVSE--TCPLCR 180
                  333333443333333..566665 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         6   9.1e+03      34      44 ..      94     104 ..      94     112 .. 0.77
   2 !   16.1   1.9   3.6e-06    0.0055      13      57 ..     140     177 ..     136     183 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 6
                  EEEHHHHHHHH CS
    PF13445.1  34 visrealekla 44 
                  v++ e+ +k+ 
  MMETSP1325-20131115|10276_1  94 VYCDEKCQKMH 104
                  79999999885 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 3.6e-06
                  -TTT-S.-SS....EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
    PF13445.1  13 Cpiske.qsteqnpPvvLpCGhvisrealeklakggrsnkgrfkCP 57 
                  C i+ e   +    P +LpCGh ++  + ++l  +g       +CP
  MMETSP1325-20131115|10276_1 140 CLICLEpPRE----PTRLPCGHSFCTGCVSELRAKGV----SETCP 177
                  8888887766....******************98766....44465 PP

>> PF03854.9  P-11 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   1.2      0.31   4.8e+02      35      44 ..     137     146 ..     113     154 .. 0.80
   2 ?   10.0   0.6   0.00026       0.4      21      46 ..     157     184 ..     153     189 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.31
                  SSEETTTTEE CS
    PF03854.9  35 serCpiCkkP 44 
                   +rC iC  P
  MMETSP1325-20131115|10276_1 137 TDRCLICLEP 146
                  69*****998 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00026
                  -EE-HHHHHHT-S..SSSEETTTTEE-- CS
    PF03854.9  21 HYLClrClqllLs..vserCpiCkkPLP 46 
                  H  C  C   l    vse Cp+C+  LP
  MMETSP1325-20131115|10276_1 157 HSFCTGCVSELRAkgVSETCPLCRAALP 184
                  7889999887753349*********999 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       4.3   6.6e+03      10      27 ..     217     234 ..     215     236 .. 0.76
   2 ?   -2.3   0.1       3.4   5.2e+03       5      13 ..     280     288 ..     278     289 .. 0.84
   3 ?    7.5   0.7    0.0026       3.9      16      31 ..     295     310 ..     295     311 .. 0.90
   4 ?   -1.4   0.0       1.8   2.7e+03      18      30 ..     333     345 ..     332     346 .. 0.76

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 4.3
                  HHHHTT-HHHHHHHHHHH CS
   PF07719.12  10 ayyklgdyeeAleafekA 27 
                  ++ ++ + + A+  f++A
  MMETSP1325-20131115|10276_1 217 SASQQEEMDGAVVMFQEA 234
                  666788888999999998 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 3.4
                  HHHHHHHHH CS
   PF07719.12   5 ynlGlayyk 13 
                  ++lG  yyk
  MMETSP1325-20131115|10276_1 280 FALGIMYYK 288
                  899**9997 PP

  == domain 3    score: 7.5 bits;  conditional E-value: 0.0026
                  -HHHHHHHHHHHHHH- CS
   PF07719.12  16 dyeeAleafekAleld 31 
                  dye+A+++fekA + d
  MMETSP1325-20131115|10276_1 295 DYEQARAWFEKAAAQD 310
                  8***********9865 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 1.8
                  HHHHHHHHHHHHH CS
   PF07719.12  18 eeAleafekAlel 30 
                   +A+e+++ +++l
  MMETSP1325-20131115|10276_1 333 RRARELYKSSIQL 345
                  5799999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       591  (0.043227); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1610.18
//
Query:       MMETSP1325-20131115|10289_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   14.4   0.0      0.017   14.3   0.0    1.0  1  PF10390.4 RNA polymerase II elongation factor ELL


Domain annotation for each model (and alignments):
>> PF10390.4  RNA polymerase II elongation factor ELL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.2e-06     0.017     192     234 ..      12      57 ..       3      60 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-06
    PF10390.4 192 vskrnlreRvihllalkpyk.kpEli..lrlrkdgvrkkekntltn 234
                  v   + r R +hll +kp+  kp l   lr   dgvr+ke+ ++ n
  MMETSP1325-20131115|10289_1  12 VLVSSTRSRNVHLLQIKPTPaKPVLAssLRVVPDGVRDKERSCVWN 57 
                  556789************961565543357778*********9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|10290_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.39s 00:00:00.66 Elapsed: 00:00:00.56
# Mc/sec: 176.57
//
Query:       MMETSP1325-20131115|10292_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00028   21.0   0.1    0.00036   20.7   0.1    1.2  1  PF10342.4 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family


Domain annotation for each model (and alignments):
>> PF10342.4  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   2.6e-08   0.00036      12      87 ..      10      79 ..       5      83 .] 0.72

  Alignments for each domain:
  == domain 1    score: 20.7 bits;  conditional E-value: 2.6e-08
    PF10342.4 12 tagkaytvtWtdvdtdppsakvsiyLvngggttlpsvktlasdvkandgsytvtipadlaasgryrikavaasdng 87
                 +   a+ v++++++t +p   ++++   +++++ p+ ++        d sy +t+p+dl+ + +y+i+a+++ +++
  MMETSP1325-20131115|10292_1 10 HSKIAFMVEYSSNSTCDPH--MTVD--DDDSNCVPIQEKFHG--GHYDDSYAWTLPSDLEHDSTYQIEAFSSQGQY 79
                 5555667777777777777..7776..666666655444444..67899*********************777663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 405.91
//
Query:       MMETSP1325-20131115|10293_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10285_1  [L=409]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-11   41.8   0.1    1.3e-10   41.1   0.0    1.3  1  PF00629.18 MAM domain


Domain annotation for each model (and alignments):
>> PF00629.18  MAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   9.6e-15   1.3e-10       9     153 ..     164     302 ..     154     306 .. 0.79

  Alignments for each domain:
  == domain 1    score: 41.1 bits;  conditional E-value: 9.6e-15
                  --EE--------EEE-TTTS.----TT---......--EEEE---------EEEEEEEEE--SS.--E.EEEEEEE--SSS--EEEEEEE--------SEEE-----SS-EEEEE-----..TS-EEEEEEEE-.----.--EEE---EE CS
   PF00629.18   9 gwsqdetddldWtrvsgstptektgpssdhtlgkesghymyvetssgaegesarllspllpass.saC.lrFyyhmsgsevgtLnvyvreekegeetllweisgnqgssWqeaevtlsai..tkkfqvvfeavrgkgse.gdialDdisl 153
                  gw+     + + t+ sgst++++tgps+  +  +   +ymy etss++  + a ++ +++++ + +   ++F yhm+g ++gt  +  +++++++++++ + sgnqg+sW+ a +++ ++    +f++v  +  g g + gd+++D +++
  MMETSP1325-20131115|10285_1 164 GWT-----TDTFTQLSGSTGSSQTGPSGASS--G--SYYMYAETSSPN--TVADVTYEMYQNFGgDIVeVEFDYHMYGVDMGTAYLDASNDGSSWDEAVTSWSGNQGNSWHSAYYAFATSysWLRFRYVSAGDEGGGGYtGDFSIDYVQV 302
                  333.....33557788899999999999883..2..58******8765..5589999999665547777***********************************************9997545578888888777755449999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       723  (0.0528818); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.59
# Mc/sec: 1661.20
//
Query:       MMETSP1325-20131115|10294_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-20   72.9   6.0    1.7e-20   72.6   4.2    1.1  1  PF05051.8 Cytochrome C oxidase copper chaperone (COX17)


Domain annotation for each model (and alignments):
>> PF05051.8  Cytochrome C oxidase copper chaperone (COX17)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   4.2   1.2e-24   1.7e-20       6      49 .]      47      90 ..      42      90 .. 0.95

  Alignments for each domain:
  == domain 1    score: 72.6 bits;  conditional E-value: 1.2e-24
                 .--SSTSHHHHHHHHHHHHH----SCHHHHHHHHHHH------S CS
    PF05051.8  6 lkpCCaCpeekkaRDeCilekgeeeCkklieaykaClrgeGFkv 49
                 +k+CC Cp++kkaRDeCi ekgee C +liea+kaClr+eGF+v
  MMETSP1325-20131115|10294_1 47 KKICCSCPNTKKARDECIPEKGEEGCLDLIEAHKACLRAEGFDV 90
                 7*****************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|10287_1  [L=492]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.81u 0.39s 00:00:01.20 Elapsed: 00:00:00.60
# Mc/sec: 1965.01
//
Query:       MMETSP1325-20131115|10286_1  [L=519]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-07   31.1   3.8    1.5e-07   30.6   2.6    1.2  1  PF00002.19 7 transmembrane receptor (Secretin family)
    1.2e-06   27.7   1.7    1.5e-06   27.4   1.2    1.1  1  PF00001.16 7 transmembrane receptor (rhodopsin family)
    1.3e-06   27.3   2.0    2.1e-06   26.7   1.4    1.3  1  PF05462.6  Slime mold cyclic AMP receptor
    0.00036   19.2   0.7    0.00036   19.2   0.5    1.7  2  PF01534.12 Frizzled/Smoothened family membrane region
  ------ inclusion threshold ------
       0.38   10.1   3.9       0.12   11.8   0.3    1.8  2  PF00528.17 Binding-protein-dependent transport system inner membrane component


Domain annotation for each model (and alignments):
>> PF00002.19  7 transmembrane receptor (Secretin family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   2.6   5.6e-11   1.5e-07      72     192 ..       3     144 ..       1     191 [. 0.79

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 5.6e-11
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...........XXXXXXXXXXXX..XXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF00002.19  72 vCkvvavflhYfllanffWllvEglylylllvvt.ffserkklkvylliGwgvPavvvvvwaivr..........kagyenekcWlsn..ekkll..........wiikgpvlliilvNfvllinilrvlvqklrsketsekek 192
                  +C++  ++  Yf la  +W lv  + l++ +v   + s r+ + +y+l+ wg+P+v+ ++ ++v           k+ ++ + cW+++  + +              +  p  ++i++N+++ + i r l q lr+   + +e 
  MMETSP1325-20131115|10286_1   3 LCTTSGILQTYFELAGPLWTLVMSFALHRTVVQRkYGSWRNSFSRYMLFCWGLPVVISILPLVVLypdpylppnkKDLLHVDWCWINKppH-H-RnspvvaviqlVCYFLPLWVVIALNVLFSVLIRRHLRQALRRDGGHDSEL 144
                  59*****************************99878888*****************9888777777999999998778888999**99642.2.223455555555667899********************999433332222 PP

>> PF00001.16  7 transmembrane receptor (rhodopsin family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   1.2   5.6e-10   1.5e-06      55     233 ..       2     184 ..       1     205 [. 0.85

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 5.6e-10
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXX..........XXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTT---HHHHHTTTSSSHHHHHTTTT---XXXX CS
   PF00001.16  55 alCklvvaldvvactasillltaisiDRYlaitrplkykrkrtkrraavlillvWllsfllslppllls..wsnteeeee....ataclisfpsek.ersytllstlvafvlpllvilvlylriyralrkrakklaskrsskrkkslkkekkaaktlliivlvfilcwlPffilvllntlckssel 233
                  alC +  +l++++ +a+ l  +++s+  + +++   ky ++r+      ++l++W l +++s++pl++   + +  ++++    + +c+i++p ++ ++ ++ ++ lv+++lpl+v++ l ++    +r++ +++ +++  ++ + +++ k+++k l  +  + +++ lP+ ++  + +l+ +++ 
  MMETSP1325-20131115|10286_1   2 ALCTTSGILQTYFELAGPLWTLVMSFALHRTVV-QRKYGSWRN--SFSRYMLFCWGLPVVISILPLVVLypDPYLPPNKKdllhVDWCWINKPPHHrNSPVVAVIQLVCYFLPLWVVIALNVLFSVLIRRHLRQALRRDGGHDSELATQLKRLVKRLQWYPYILMITTLPVSLIRWYPWLNGMNKD 184
                  689999999999999999999999999999999.568888888..8889999*************8764114444555559************99999***********************************9999999999999************************9999999999888833 PP

>> PF05462.6  Slime mold cyclic AMP receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   1.4   7.7e-10   2.1e-06      76     152 ..       4      91 ..       2     165 .. 0.67

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 7.7e-10
    PF05462.6  76 cylyaivitygslacwlwtlclaisiynlivkrepepek..fekyyyllcwglplistivml.........akevvev.vgnwcwigee 152
                  c    i  ty  la  lwtl++++++++ +v+r+    +  f + y l+cwglp++++i+ l           +  ++   +wcwi++ 
  MMETSP1325-20131115|10286_1   4 CTTSGILQTYFELAGPLWTLVMSFALHRTVVQRKYGSWRnsFSR-YMLFCWGLPVVISILPLvvlypdpylPPNKKDLlHVDWCWINKP 91 
                  66677899************************997764411554.6899******9998654111222222122222213489999753 PP

>> PF01534.12  Frizzled/Smoothened family membrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.5   1.3e-07   0.00036      93     157 ..       3      66 ..       1      70 [. 0.84
   2 ?   -2.0   0.3      0.36   9.9e+02     288     309 ..     201     222 ..     101     233 .. 0.68

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 1.3e-07
   PF01534.12  93 sCtvvfllvYfflmassvWwviLtltwflaaglkwgaeaiekkssyfHlvaWgvpavktiavLal 157
                   Ct   +l  +f +a+ +W ++++++++ +  ++      ++ s+y+ l +Wg+p v +i  L++
  MMETSP1325-20131115|10286_1   3 LCTTSGILQTYFELAGPLWTLVMSFALHRTVVQRKYGSWRNSFSRYM-LFCWGLPVVISILPLVV 66 
                  7***************************9877665545556666665.99**********88775 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.36
   PF01534.12 288 lavfmlkllmllvvGitssvWv 309
                  +++  + +l +l+ G+t +vW 
  MMETSP1325-20131115|10286_1 201 VSIGSTGILHSLAYGMTNAVWQ 222
                  4444556677777777777775 PP

>> PF00528.17  Binding-protein-dependent transport system inner membrane component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   4.2e-05      0.12      14      77 ..      39     135 ..      26     136 .. 0.89
   2 ?   -2.1   0.1      0.76   2.1e+03     117     132 ..     189     204 ..     151     223 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.2e-05
   PF00528.17  14 kkldkllrpliivlsslPsfvlaillvlvf.................................vilsilghlilpviillllsaapyvrlirraalr 77 
                  + +++ +++++ + ++lP+++ +++lv++                                  vi+ + ++l l+v+i+l + +  ++r+  r+alr
  MMETSP1325-20131115|10286_1  39 GSWRNSFSRYMLFCWGLPVVISILPLVVLYpdpylppnkkdllhvdwcwinkpphhrnspvvaVIQLVCYFLPLWVVIALNVLFSVLIRRHLRQALR 135
                  678999***************7777775668*******************************9999999999***9999999999999998888886 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.76
   PF00528.17 117 afggllggavlleflg 132
                  af +++ +avll  +g
  MMETSP1325-20131115|10286_1 189 AFESSWFEAVLLVSIG 204
                  3344444555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.88u 0.36s 00:00:01.24 Elapsed: 00:00:00.61
# Mc/sec: 2038.87
//
Query:       MMETSP1325-20131115|10297_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.23   10.9   2.9       0.26   10.7   2.0    1.1  1  PF06121.9 Domain of Unknown Function (DUF959)


Domain annotation for each model (and alignments):
>> PF06121.9  Domain of Unknown Function (DUF959)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.0   1.9e-05      0.26      33      86 ..       4      61 ..       1      69 [. 0.64

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 1.9e-05
    PF06121.9 33 spaassvakPqastpvqstedttth......vvprdgeteesttpasseeekeiveegkq 86
                   ++ ++ +P+ +tpv +ted +t+      v   + e +++t++ ++e++   ++ +++
  MMETSP1325-20131115|10297_1  4 TAMEPAAFEPEETTPVPPTEDDQTAssfsffVCCEPTEETDATASYKPEDDT--INTEDD 61
                 456778889***********88887333333455666666666666665554..443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|10298_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|10299_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.57
# Mc/sec: 342.93
//
Query:       MMETSP1325-20131115|10295_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       600  (0.0438853); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.54
# Mc/sec: 1393.44
//
Query:       MMETSP1325-20131115|10301_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 244.33
//
Query:       MMETSP1325-20131115|10302_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-22   80.5   2.9    1.1e-22   80.3   2.0    1.0  1  PF07221.6  N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
     0.0098   14.4   0.1      0.011   14.2   0.0    1.0  1  PF01532.15 Glycosyl hydrolase family 47


Domain annotation for each model (and alignments):
>> PF07221.6  N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   2.0   1.7e-26   1.1e-22     262     344 ..       2      86 ..       1      88 [. 0.90

  Alignments for each domain:
  == domain 1    score: 80.3 bits;  conditional E-value: 1.7e-26
                  -----BSS--EEHHHHHHH---HHHHHHH---CHHHHHHHHHHHHHHHHTB-S----B-SEE-TTS-..B-------.----TTTH CS
    PF07221.6 262 dregkpldddkllWvqaEalkaaaalaeltgeekylewyerlaaylrrhlidpekGlWydkldedge..vaeklpag.kskfYHll 344
                  d +gk +d+dk++WvqaE+ ++aa+l ++tg++ky ++y++l++y+++h+id+ +G+Wy+ l++d++    ek+ ag k + YH+l
  MMETSP1325-20131115|10302_1   2 DLNGKWCDTDKYFWVQAESFATAAMLLQATGDAKYKKMYDALWNYCWEHFIDHTNGAWYRILNQDNSkvTNEKSAAGaKCD-YHTL 86 
                  789***************************************************************995445555551566.**98 PP

>> PF01532.15  Glycosyl hydrolase family 47
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   1.6e-06     0.011     155     212 ..      26      82 ..      18      94 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.6e-06
                  HHHHH---THHHHHHHHHHHHHHS-S.GG-S------SEEES----EC-.-B-----SH CS
   PF01532.15 155 rLsqlTgdpkYedaaeratealeklq.nrsklpglvptvidassgkfveeeiglGagaD 212
                   L q Tgd+kY+++ + ++++ +++  +  +++g +   ++ ++ k+++e++  Ga+ D
  MMETSP1325-20131115|10302_1  26 MLLQATGDAKYKKMYDALWNYCWEHFiD--HTNGAWYRILNQDNSKVTNEKSAAGAKCD 82 
                  5889********************5533..47****************99******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       537  (0.0392774); expected 273.4 (0.02)
Passed bias filter:                      446  (0.0326214); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|10303_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-05   22.3   7.2    0.00046   19.6   0.1    2.9  3  PF00779.14 BTK motif
     0.0025   17.9   0.4     0.0025   17.9   0.2    2.6  2  PF04968.7  CHORD
  ------ inclusion threshold ------
      0.097   11.6   0.1        0.1   11.6   0.1    1.1  1  PF11822.3  Domain of unknown function (DUF3342)


Domain annotation for each model (and alignments):
>> PF00779.14  BTK motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.6      0.29   1.3e+03      26      31 ..       5      10 ..       5      11 .. 0.84
   2 !    6.2   0.0    0.0016       7.2       2      10 ..      23      31 ..      22      38 .. 0.79
   3 !   19.6   0.1     1e-07   0.00046      12      27 ..      53      68 ..      50      73 .. 0.88

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.29
   PF00779.14 26 Cqpvts 31
                 Cq++++
  MMETSP1325-20131115|10303_1  5 CQRCHA 10
                 999997 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0016
   PF00779.14  2 kYHPgawld 10
                  YHP+a+ +
  MMETSP1325-20131115|10303_1 23 AYHPEAFTG 31
                 5******84 PP

  == domain 3    score: 19.6 bits;  conditional E-value: 1e-07
   PF00779.14 12 kWlCCkqteknApGCq 27
                  W+CC+ t + ApGC 
  MMETSP1325-20131115|10303_1 53 FWTCCGLTREDAPGCV 68
                 6**************5 PP

>> PF04968.7  CHORD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.2   5.6e-07    0.0025       6      31 ..       6      29 ..       2      45 .. 0.82
   2 ?    1.8   1.2     0.056   2.6e+02      39      49 ..      53      63 ..      49      73 .. 0.63

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 5.6e-07
                 --B----EE-STT--TT---BB---- CS
    PF04968.7  6 knkgCgktyeeeeneeeaCvyHpgap 31
                 +   C++++++ en++ +C+yHp+a 
  MMETSP1325-20131115|10303_1  6 Q--RCHAHFDPLENKNGSCAYHPEAF 29
                 4..4*******************964 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.056
                 --TTTT--BSS CS
    PF04968.7 39 gwsCCkkkvld 49
                 +w+CC  +  d
  MMETSP1325-20131115|10303_1 53 FWTCCGLTRED 63
                 79999765544 PP

>> PF11822.3  Domain of unknown function (DUF3342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.2e-05       0.1     263     293 ..       4      34 ..       1      59 [. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.2e-05
    PF11822.3 263 lCrrCeelvslldvskhrCselpkkfsfpen 293
                  lC+rC++++  l+ ++ +C ++p++f   ++
  MMETSP1325-20131115|10303_1   4 LCQRCHAHFDPLENKNGSCAYHPEAFTGEDS 34 
                  7***********************9987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 454.82
//
Query:       MMETSP1325-20131115|10303_2  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 454.82
//
Query:       MMETSP1325-20131115|10304_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   12.1   0.0      0.066   11.9   0.0    1.1  1  PF07692.6 Low iron-inducible periplasmic protein


Domain annotation for each model (and alignments):
>> PF07692.6  Low iron-inducible periplasmic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.8e-06     0.066     134     254 ..      38     153 ..       8     158 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 4.8e-06
    PF07692.6 134 YalhEvdeAvskkadgnsadasGAPHnlDEawAlyyggaeadcgklsawefsldaAan..skgqavlGasvantlllksfvnelrAaaslstlkiedavAarlnevrlLaLsslravlkYtek 254
                   +lh +d+  + +a +n        + +D +w  +yg+ ++           +  A++     +a  G  v    l + f ++  Aa+  +  ++++a+ a   + rlL++  +ra +kY++k
  MMETSP1325-20131115|10304_1  38 MMLHGLDTLDNAIAMDNEC----SKYEWDKGWSYLYGADDNSPSPGKNAP--FTVAYKrdNDFTASGGIDVMGGYLPNLFRQGH-AALASDPRDLDAAQEASDAIKRLLTITFVRAGIKYSKK 153
                  4667777777777666654....4569**********8776654433333..55565300445566677777777777766665.55555666***************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 859.56
//
Query:       MMETSP1325-20131115|10305_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-06   28.1   0.1      1e-06   28.1   0.1    1.0  1  PF00459.20 Inositol monophosphatase family


Domain annotation for each model (and alignments):
>> PF00459.20  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.1   7.6e-11     1e-06     191     245 ..      11      65 ..       3      87 .. 0.88

  Alignments for each domain:
  == domain 1    score: 28.1 bits;  conditional E-value: 7.6e-11
                  BE-SHHHHHHHHH----SEEEEEEEEBHHHH----HHHHH---EEEECSS-S.CS CS
   PF00459.20 191 rvgssalklalvAeGkadayiefgrekkWDhaAGvaiveeaGGvvtdlkgegltl 245
                   +g  a+++ l+A G +d+++++  +  +D++A + +++ aGG+v+ ++g+gl+ 
  MMETSP1325-20131115|10305_1  11 YMGPNAYSWGLLASGCLDIVLDAHDCGVYDFCAIIPVIQGAGGRVVRYDGQGLDN 65 
                  467788999**************99**************************7764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|10306_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 674.89
//
Query:       MMETSP1325-20131115|10309_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|10310_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.46s 00:00:00.86 Elapsed: 00:00:00.66
# Mc/sec: 668.08
//
Query:       MMETSP1325-20131115|10314_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0057   16.3   0.2     0.0057   16.3   0.1    1.0  1  PF01183.15 Glycosyl hydrolases family 25


Domain annotation for each model (and alignments):
>> PF01183.15  Glycosyl hydrolases family 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   4.2e-07    0.0057     105     159 ..       4      60 ..       1      70 [] 0.70

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 4.2e-07
   PF01183.15 105 taeilafldeikkkaGykpviYtsksfltnnldlsqiakey...plWiAeYpkkeakk 159
                  +a i+++++e   k G+++ iY+s + +++ ++l + + +    plW A+Y+++++ +
  MMETSP1325-20131115|10314_1   4 QAFIEDMINEG-LKLGVTAGIYSSYNSWQSVVGLDYNYPSSlgmPLWYAHYDNSPSFS 60 
                  55555566555.568**********9999995555544444469********997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.26u 0.48s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|10315_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.3   0.1       0.33   10.3   0.0    2.1  2  PF07653.12 Variant SH3 domain
      0.065   13.3   0.6       0.08   13.0   0.4    1.1  1  PF06676.6  Protein of unknown function (DUF1178)


Domain annotation for each model (and alignments):
>> PF07653.12  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   4.9e-05      0.33      17      39 ..      56      76 ..      42      84 .. 0.82
   2 ?    0.7   0.0     0.048   3.3e+02      21      41 ..     112     133 ..     108     137 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 4.9e-05
                 -B----EEEEE.E-S----BEEE CS
   PF07653.12 17 slkkGDvikvlgskesdgwwege 39
                 +++kGD +kv+   +s +w+ +e
  MMETSP1325-20131115|10315_1 56 RFTKGDRVKVQ--GGSSKWIDAE 76
                 8**********..6666776665 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.048
                  --EEEEE.E-S----BEEEE..- CS
   PF07653.12  21 GDvikvlgskesdgwweges..g 41 
                  +++i++  +  ++++++g+s  g
  MMETSP1325-20131115|10315_1 112 DEFIRLA-ELVRIEGILGRSggG 133
                  7888888.445669999999533 PP

>> PF06676.6  Protein of unknown function (DUF1178)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.4   1.2e-05      0.08      62     106 ..      11      62 ..       1      71 [. 0.69

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.2e-05
    PF06676.6  62 aaapakaaaeaa.......eeeaeleaalaelrrkveknsedVGekFaeeAr 106
                  aa+p+++a+ +a       +e++++++ l e+++kv++n    G++F++  r
  MMETSP1325-20131115|10315_1  11 AAKPKPKAKPKAkpkpkgpTEAEKAQKSLVECEKKVKTNLSTTGHRFTKGDR 62 
                  333333333333345555678899***********************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.47s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 670.98
//
Query:       MMETSP1325-20131115|10316_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 708.71
//
Query:       MMETSP1325-20131115|10312_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 1288.61
//
Query:       MMETSP1325-20131115|10308_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-32  110.2   0.1    7.8e-32  109.9   0.0    1.1  1  PF01081.14 KDPG and KHG aldolase


Domain annotation for each model (and alignments):
>> PF01081.14  KDPG and KHG aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9   0.0   5.7e-36   7.8e-32       4     195 ..      50     241 ..      47     242 .. 0.94

  Alignments for each domain:
  == domain 1    score: 109.9 bits;  conditional E-value: 5.7e-36
                  HHHHHSB--EE--SSGGGHHHHHHHHHH----EEEE-TTSTTHHHHHHHHHHH-TT.SEEEE-E--SHHHHHHHHH----CEE-----HHHHHHHHHTTS-EE----SHHHHHHHHH----EEEETTTTT----HHHHHH----TT-EEEE-----TTTHHHHHCSTTB--B---CCC-HHHHHTT-CCCHHH CS
   PF01081.14   4 ilkeakvvpvivikdkedalplaeaLvagGlrvlevtlrteaaldairvlrkerpd.llvgaGtvlnaqqlaeakeaGaqFvvsPGltedllkaavdlkipllPGvstpseimlaldlGlkrlklFPaeasGGvkalkalagpfaqvrfiPtGGispanvrdylalpsvlvvggswlveaslikkedldkitk 195
                  ++ e k  +v++   +e a + + a v+gG + +e tl+t++ ld i   r++  d l+ g Gtv++ + +++a +aG++F+v+P l ++++  +  ++ip+ PG +tpse   a++ G    k+FP  + GG   +ka++++ + +r+ Pt G+++ n+ ++l++++  v   + l + +++ +ed+d+i++
  MMETSP1325-20131115|10308_1  50 KFAEHKACAVLRTPTAEAAPKAMTAAVDGGFKLVEFTLTTPGCLDSIADFRAKHGDsLMTGCGTVMDIEDAKAAMDAGSEFLVAPCLVPEVVTWCRMHNIPIFPGCQTPSEAYAAYKAGAPVQKIFPG-VAGGPMWVKAVSAAMPMLRLNPTSGVDLDNAAEFLQNGAASVGLVAPLFPPNVVADEDWDQIQA 241
                  567889999*****999999999************************98776665527789******************************************************************5.7888999******************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1283.05
//
Query:       MMETSP1325-20131115|10317_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-08   33.2   0.3    4.7e-08   32.9   0.2    1.2  1  PF13499.1  EF-hand domain pair
    5.1e-08   32.3   4.5    1.3e-06   27.8   0.2    2.3  2  PF13833.1  EF-hand domain pair
    1.1e-07   30.4   0.8      1e-05   24.3   0.3    2.4  2  PF00036.27 EF hand
    3.3e-07   29.2   0.7    3.4e-06   26.0   0.3    2.3  2  PF13202.1  EF hand
    7.9e-07   28.3   0.3    2.5e-06   26.8   0.1    1.9  2  PF13405.1  EF-hand domain
     0.0002   21.0   0.6    0.00032   20.3   0.4    1.3  1  PF00397.21 WW domain
  ------ inclusion threshold ------
      0.095   12.2   0.0       0.15   11.5   0.0    1.3  1  PF03672.8  Uncharacterised protein family (UPF0154)


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.2   2.4e-11   4.7e-08       4      53 ..      55     100 .]      31     100 .] 0.89

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 2.4e-11
    PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkng 53 
                  e F ++D dg+g +dk+eL+ +l ++g    ++ ++  ld +++e+D++g
  MMETSP1325-20131115|10317_1  55 EKFAQMDLDGSGAIDKDELRVILAAMG----ERITDARLDSLIREVDTDG 100
                  45*************************....88888888888******97 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.3   5.3e-05       0.1      31      46 ..      57      72 ..      34      72 .. 0.83
   2 !   27.8   0.2   6.5e-10   1.3e-06       2      38 ..      65     100 .]      64     100 .] 0.96

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.3e-05
    PF13833.1 31 frefDtdgdGkisfeE 46
                 f  +D+dg+G+i+++E
  MMETSP1325-20131115|10317_1 57 FAQMDLDGSGAIDKDE 72
                 889***********99 PP

  == domain 2    score: 27.8 bits;  conditional E-value: 6.5e-10
    PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdg 38 
                  +G I+++eL+ +la++g   +++  +d l+re+Dtdg
  MMETSP1325-20131115|10317_1  65 SGAIDKDELRVILAAMGER-ITDARLDSLIREVDTDG 100
                  799**********999*99.****************7 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.3   5.4e-09     1e-05       1      28 [.      52      79 ..      52      80 .. 0.91
   2 ?    4.3   0.0     0.013        25       2      13 ..      89     100 .]      88     100 .] 0.89

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 5.4e-09
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkk 28
                 e++e F+ +D Dg+G I+++E++ +l++
  MMETSP1325-20131115|10317_1 52 EFEEKFAQMDLDGSGAIDKDELRVILAA 79
                 68889*******************9986 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.013
                  HHHHHHHHCTTT CS
   PF00036.27   2 lkeaFkefDkDg 13 
                  l+ +++e+D+Dg
  MMETSP1325-20131115|10317_1  89 LDSLIREVDTDG 100
                  7889*******8 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.3   1.8e-09   3.4e-06       3      23 ..      56      75 ..      53      78 .. 0.88
   2 ?    1.1   0.0      0.13   2.5e+02       2      12 ..      90     100 .]      89     100 .] 0.80

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 1.8e-09
                 HHHHHH--S----B-HHHHHH CS
    PF13202.1  3 dtFrafDlNgDGkIsreELkr 23
                 + F ++Dl+g+G I+++EL+ 
  MMETSP1325-20131115|10317_1 56 K-FAQMDLDGSGAIDKDELRV 75
                 6.*****************95 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.13
                  HHHHHHH--S- CS
    PF13202.1   2 kdtFrafDlNg 12 
                  +++ r++D++g
  MMETSP1325-20131115|10317_1  90 DSLIREVDTDG 100
                  567899****8 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.1   1.3e-09   2.5e-06       1      30 [.      52      80 ..      52      81 .. 0.92
   2 ?   -2.1   0.0       2.3   4.6e+03       2      13 ..      89     100 .]      88     100 .] 0.70

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 1.3e-09
                 HHH---GCC-------B---HHHHHHH.H- CS
    PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrksl 30
                 e++e F ++D dg+G id++ELr +L  ++
  MMETSP1325-20131115|10317_1 52 EFEEKFAQMDLDGSGAIDKDELRVILA-AM 80
                 799**********************98.55 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 2.3
                  HH---GCC---- CS
    PF13405.1   2 lreaFklfDkdg 13 
                  l ++ +  D+dg
  MMETSP1325-20131115|10317_1  89 LDSLIREVDTDG 100
                  556667889986 PP

>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.4   1.7e-07   0.00032      14      31 .]       9      26 ..       5      26 .. 0.94

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.7e-07
                 --EEEEETTT--EESS-- CS
   PF00397.21 14 GrvYYyNheTgetqWekP 31
                 G+ YYyN +Tg t W  P
  MMETSP1325-20131115|10317_1  9 GQAYYYNSTTGATKWQMP 26
                 899************988 PP

>> PF03672.8  Uncharacterised protein family (UPF0154)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   7.9e-05      0.15      32      60 ..      68      96 ..      54      99 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 7.9e-05
    PF03672.8 32 inedairlmlaqmGrkpSekqinqilkai 60
                 i +d +r++la mG +  + +++ +++++
  MMETSP1325-20131115|10317_1 68 IDKDELRVILAAMGERITDARLDSLIREV 96
                 89*****************9999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 452.14
//
Query:       MMETSP1325-20131115|10318_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-21   77.0   0.2      2e-21   76.8   0.1    1.1  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
        0.2   10.0   0.3       0.25    9.7   0.2    1.1  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.8   0.1   2.9e-25     2e-21     140     215 ..       3      80 ..       1      85 [. 0.84

  Alignments for each domain:
  == domain 1    score: 76.8 bits;  conditional E-value: 2.9e-25
                  EE--CCHCCTTEEE--BSST...CC-T.TG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSS..SGGGTTSS CS
   PF00112.18 140 aidaseedfqlYksGvyket...ecss.telnhavlivGygvengkkyWivkNSWgtdwGekGYiriargkn..necgiese 215
                  ++ a+   +++Y+sG+++ +   +     elnh+v++vGyg++++  y++v+NSWgt+wGe GYir+ar  +  ++cg +s 
  MMETSP1325-20131115|10318_1   3 TVAATP--WEFYSSGIFSPPsglS--AtWELNHGVQMVGYGTDGSDGYYLVRNSWGTSWGEAGYIRLARTDDeaSNCGTDSA 80 
                  444444..79*********97432..3489***************************************9887788987765 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.2   3.6e-05      0.25     359     396 ..      29      64 ..      24      70 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 3.6e-05
   PF03051.10 359 mtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfv 396
                  ++H + ++g     dg+   + v nsWG   Ge Gy  
  MMETSP1325-20131115|10318_1  29 LNHGVQMVGYGT--DGSDGYYLVRNSWGTSWGEAGYIR 64 
                  678888888877..67778899**************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 540.36
//
Query:       MMETSP1325-20131115|10320_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 281.92
//
Query:       MMETSP1325-20131115|10322_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 144.69
//
Query:       MMETSP1325-20131115|10323_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 577.94
//
Query:       MMETSP1325-20131115|10324_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|10325_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00023   21.3   0.0    0.00024   21.2   0.0    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.7e-08   0.00024      25      51 ..      48      74 ..      19      81 .. 0.79

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.7e-08
                 -TTTTT--------TTT---------- CS
   PF00504.16 25 tlkrlreaEliHGRvAMlavlGalvpe 51
                  ++rl+ +E++HGR AM++ +  l+++
  MMETSP1325-20131115|10325_1 48 FFRRLQDSEVVHGRAAMIGGAILLFQQ 74
                 689999999999999999988888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 372.77
//
Query:       MMETSP1325-20131115|10327_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.61
# Mc/sec: 392.85
//
Query:       MMETSP1325-20131115|10313_1  [L=1104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-33  116.0   0.0    7.6e-33  113.4   0.0    2.4  1  PF00009.22 Elongation factor Tu GTP binding domain
    3.4e-15   55.7   0.0    9.1e-15   54.3   0.0    1.7  1  PF11987.3  Translation-initiation factor 2
    4.9e-08   32.8   0.2    2.2e-07   30.7   0.0    2.3  2  PF01926.18 50S ribosome-binding GTPase
    5.1e-08   32.8   5.8     0.0025   17.7   0.0    3.6  4  PF03144.20 Elongation factor Tu domain 2
    0.00011   21.7   0.0     0.0003   20.3   0.0    1.8  1  PF03029.12 Conserved hypothetical ATP binding protein
     0.0016   18.7   0.0     0.0072   16.7   0.0    2.2  1  PF08477.8  Miro-like protein
     0.0035   16.4   7.1       0.24   10.4   0.0    3.9  4  PF02421.13 Ferrous iron transport protein B
  ------ inclusion threshold ------
      0.011   15.7   0.0      0.036   14.0   0.0    1.9  1  PF13401.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   0.0   4.4e-36   7.6e-33       5     186 ..     433     642 ..     430     644 .. 0.81

  Alignments for each domain:
  == domain 1    score: 113.4 bits;  conditional E-value: 4.4e-36
                  EEEEEESTT---HHHHHHHHHHCCCCEHHHHHHHC-..HHHCCHHHH---BBSSEEEEEE.............T....ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-S-HHHHHHHHHHHHTT--EEEEEE-TTST...........CHHHHHHHHHHHHHH.................HHHCTTGCT.........CGEEEEEE-STCCHHHHHHHHHHHHHS CS
   PF00009.22   5 nigiighvDhGKtTltdallykagaiskrgeeaegerlldklkeerergiTiksaaisle.............k...etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqTeevlrlakklgvkiivviNKiDrv...........eaeleeiveelkekl.................lekylekge.........eevpvvpgSalkgegidaLleaivell 186
                   ++i+ghvD GKt l+d++ +++                  +++ ++ giT++++a+++              +     k   + +iDtPGH+ Fs+  +rg +++D+a+lv+d  +G e+qT e +++++k +++++v++NK+Dr+           ++ l  ++e+ ++++                         e         ++v+++p+Sa +geg+++Ll++iv+l 
  MMETSP1325-20131115|10313_1 433 ICCIMGHVDTGKTKLLDKIRQTN------------------VQTGEAGGITQQIGATYFPpekllektqklneDlglVMKLPGLLVIDTPGHEAFSNLRSRGSSLCDIAILVIDLMHGLEQQTVESIEMLRKKKCPFVVALNKVDRCydwqehpdlefRETLALQKEDTQREFrdrmmgvrtqlnekglnA-------ElywdnkelgSTVSMIPTSAHSGEGVNDLLHMIVRLT 642
                  689*****************555..................444555566666666666555555555444331334699999****************************************************************99999998877777777888888888988888888866666552.......244444457789*********************9976 PP

>> PF11987.3  Translation-initiation factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.0   5.3e-18   9.1e-15      14     108 ..     777     876 ..     762     877 .. 0.88

  Alignments for each domain:
  == domain 1    score: 54.3 bits;  conditional E-value: 5.3e-18
    PF11987.3  14 evkelnvivkaDvqGsleAlkesLeklsteevkvkvihagvGaitesDvtlAsasn.......aiilgFnvradakakklaeeegvkirlysvIYkliddvk 108
                  +++  +v  +a + G+leAl e L++    +  ++v   ++G+i ++Dv+ A  ++       a+il+F+v +d++a +laee +vki++ ++IY+l+d+++
  MMETSP1325-20131115|10313_1 777 ATDAEGVFAQASTLGALEALLEFLRNE--CKPPIPVHAVAIGPIFKRDVMRAGLMHqkglpqfATILAFDVPIDNDAVALAEELNVKIFTADIIYHLFDQYT 876
                  567789999****************99..5667899999**************98779*****************************************986 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.7   4.5e+03      47      83 ..     334     387 ..     287     414 .. 0.48
   2 !   30.7   0.0   1.3e-10   2.2e-07       2     114 .]     434     557 ..     433     557 .. 0.71

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2.7
                  EEEEE---................SSSHHHHHHHHH.HHHHHHHHHCTSSEEEE CS
   PF01926.18  47 iilvDtPG................iiegasedkeie.gikkylekveradvlll 83 
                  i++ D+ G                ++e+a ++k  e   +++++++++a++ +l
  MMETSP1325-20131115|10313_1 334 IEIPDIGGgdesdededlvekerrLAEEALKKKGQEkARRDAEAAAKKAEAEAL 387
                  556677773333333333222222222211222111122223333344444333 PP

  == domain 2    score: 30.7 bits;  conditional E-value: 1.3e-10
                  EEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE.........ETTE.............EEEEE---SSSHHHHHHHHHHHHHH.HHHHCTSSEEEEEEETTSHHHHHHHHHHHHHH.TCCCEEEEEEC CS
   PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev.........kkek.............iilvDtPGiiegasedkeiegikky.lekveradvlllvvdasavlkeadkellnele.akkplilvlnk 114
                  ++i+G+  +GK+ L+ ++ +  ++++++  g T++i   ++         +  k             ++++DtPG        +    +++   +    +d+++lv+d+ + l+++  e +++l+ +k p++++lnk
  MMETSP1325-20131115|10313_1 434 CCIMGHVDTGKTKLLDKIRQT-NVQTGEAGGITQQIGATYFppekllektQ--KlnedlglvmklpgLLVIDTPGH-------E---AFSNLrSRGSSLCDIAILVIDLMHGLEQQTVESIEMLRkKKCPFVVALNK 557
                  79****************976.66************554556666675440..1445557666655558******2.......2...3333303444888********88855554444448886477899999998 PP

>> PF03144.20  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1         4   6.9e+03      31      53 ..     400     422 ..     393     423 .. 0.71
   2 ?   -3.2   0.0       5.1   8.8e+03      21      41 ..     436     457 ..     436     479 .. 0.66
   3 !   17.7   0.0   1.5e-06    0.0025       3      73 ..     672     747 ..     670     748 .. 0.93
   4 !   16.5   0.1   3.6e-06    0.0062       3      58 ..     915     967 ..     914     972 .. 0.86

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 4
                  EEEEEEEEEETTCEESEEECEE- CS
   PF03144.20  31 ivtrvrsletfngdldeavagan 53 
                    +++r+le+ + +++++ ++a+
  MMETSP1325-20131115|10313_1 400 REAEIRKLEARKRRMEREAEEAA 422
                  44899999999887776666665 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 5.1
                  EET.TTCTEEEEEEEEEEEEET CS
   PF03144.20  21 ilg.ndtskkeivtrvrsletf 41 
                  i+g  dt+k++ + ++r++ + 
  MMETSP1325-20131115|10313_1 436 IMGhVDTGKTKLLDKIRQTNVQ 457
                  5666777777766666655443 PP

  == domain 3    score: 17.7 bits;  conditional E-value: 1.5e-06
                  EEEEEEEE--EETTEEEEEET.TTCTEEEEEEEEEEEEETTCEESEE..........ECEE--EEEESSSGGGGGTT---EE CS
   PF03144.20   3 vatgrvysGtlkkGdtvrilg.ndtskkeivtrvrsletfngdldea..........vaganaGvivaikgledaiikGdtl 73 
                  ++++++++G+++ Gd+++++   +    ++v+  r+l+t+ ++ +e+             a++Gv++ + gle+a  +G+++
  MMETSP1325-20131115|10313_1 672 TVDVILVNGEMNAGDQLVVCTtDG----PVVAQARALLTP-PPNRELrikaqyinhdNIKAAIGVKICAQGLEHA-VAGSPI 747
                  799****************99776....8***********.9999999*********9999*************8.999876 PP

  == domain 4    score: 16.5 bits;  conditional E-value: 3.6e-06
                  EEEEEEEE--EETTEEEEEET.TTCTEEE..EEEEEEEEEETTCEESEEECEE--EEEE CS
   PF03144.20   3 vatgrvysGtlkkGdtvrilg.ndtskke..ivtrvrsletfngdldeavaganaGviv 58 
                  ++++ v +G+lk+G  + i + n     +  +v+rv+s+e  ++ +d+a +g  + + +
  MMETSP1325-20131115|10313_1 915 IVGVEVLEGILKVGTPLCI-PhN-----NflQVGRVTSIESNHQQVDRAKKGTQCAISI 967
                  678899*************.444.....458*****************99998887765 PP

>> PF03029.12  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.7e-07    0.0003      66     237 ..     469     643 ..     439     644 .. 0.75

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.7e-07
   PF03029.12  66 galvvaleflrekldwldeeleeked..dyvlfDtPGQielftlseslakiveaLesefalvvvylvDsqrltdptkfisgllsalsimlklelPhvvalnkfDllkek.lekeleffedvealqallekd..............lkklaesiaelleefalvlrflplsaekeesmeellslidealq 237
                  ga+ +  e l ek ++l+e+l+   +   ++++DtPG   + +l++ ++        +   +++ ++D     +       ++ ++ ++ k + P+vvalnk+D + +  ++ +lef e + alq+  ++                k l++++    +e + +++++p sa+++e++++ll++i  ++q
  MMETSP1325-20131115|10313_1 469 GATYFPPEKLLEKTQKLNEDLGLVMKlpGLLVIDTPGHEAFSNLRSRGS--------SLCDIAILVIDLMHGLEQQ-----TVESIEMLRKKKCPFVVALNKVDRCYDWqEHPDLEFRE-TLALQKEDTQRefrdrmmgvrtqlnEKGLNAELYWDNKELGSTVSMIPTSAHSGEGVNDLLHMIVRLTQ 643
                  555556666777777888988777555789*******999999999999........4444566666655444422.....2223566899**************88555555555555.44444444444799999**9999888889999998889999999*****************99987765 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   4.2e-06    0.0072       3     119 .]     435     559 ..     434     559 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 4.2e-06
    PF08477.8   3 vvvGdkgvGKssllsqlvgeefp........kkklpeeikgdtlavktlevdvdtel............lelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                   ++G  ++GK+ ll ++ + + +        +       +g+t+   ++ +++ ++l            l + d+ g+e ++      +  +d ++lv+dl  +   ++v+++    + lrk  kk p ++  nk D
  MMETSP1325-20131115|10313_1 435 CIMGHVDTGKTKLLDKIRQTNVQtgeaggitQ------QIGATYFPPEKLLEKTQKLnedlglvmklpgLLVIDTPGHEAFSNLRSRGSSLCDIAILVIDLMHGLEQQTVESI----EMLRK--KKCPFVVALNKVD 559
                  799***************99999665554431......222233323333333333355556688888899************77777***************9988888666....55554..469********98 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.9       3.4   5.8e+03     143     170 ..     378     408 ..     364     424 .. 0.66
   2 !    7.5   0.0    0.0011       1.9       4     118 ..     435     561 ..     433     572 .. 0.74
   3 !   10.4   0.0   0.00014      0.24     133     182 ..     613     662 ..     593     666 .. 0.77
   4 ?   -1.4   0.0      0.62   1.1e+03     120     162 ..     728     771 ..     719     789 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 3.4
                  CCGTB--HHHHHHHHHHCTCG-XXX.....X CS
   PF02421.13 143 arkkkgieelleaiievaekeekekkl...l 170
                  a+kk + e+l +++++ a+k+e+e++     
  MMETSP1325-20131115|10313_1 378 AAKKAEAEALAAQVAAEADKAEREAEIrklE 408
                  6778888888888888877766665542222 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0011
                  EEE--TT---HHHHHHH----TB--------S--BB--EEE..........TTEEEEEEE------SSSSSHHHHHHHHHHHHH--SEEEEEEEGGG.HHHHHHHHHHHH.HTT-SEEEEEETHHHH CS
   PF02421.13   4 alvGnpnvGKttlfnaltgakqkvgNwpGvTVekkegklkl..........kgkeveivDLPGiYsLsayseeekvardylleekpdviinvvDasn.lernLyLtlqll.elgvpvvvalnmiDea 118
                  +++G  ++GKt l++++ +++ ++g   G+T +    ++            +++   ++ LPG   +++  +e     +   ++  d+ i v+D  + le++ +  +++l   + p+vvaln++D  
  MMETSP1325-20131115|10313_1 435 CIMGHVDTGKTKLLDKIRQTNVQTGEAGGITQQIGATYFPPekllektqklNEDLGLVMKLPGLLVIDTPGHEAFSNLRSRGSSLCDIAILVIDLMHgLEQQTVESIEMLrKKKCPFVVALNKVDRC 561
                  688999*************************887777664322222222213333457889999999988888888888888889999999999765488877766665514568999999999975 PP

  == domain 3    score: 10.4 bits;  conditional E-value: 0.00014
                  H--..--EEEEBCCGTB--HHHHHHHHHHCTCG-XXX..XXX.HHHHHHHHH CS
   PF02421.13 133 lLg..vpvvktvarkkkgieelleaiievaekeekekkllkyseeleeaiee 182
                  +Lg  v +++t+a++++g+++ll+ i+++++++ +++  l ys++l+ ++ e
  MMETSP1325-20131115|10313_1 613 ELGstVSMIPTSAHSGEGVNDLLHMIVRLTQERMASS--LMYSATLQCTVLE 662
                  44433789*******************9999986665..6787777766655 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 0.62
                  C---EB-HHHHHHH-.---EEEEBCCGTB--HHHHHHHHHHCTC CS
   PF02421.13 120 kkgikidlkkLselL.gvpvvktvarkkkgieelleaiievaek 162
                  + g+ki ++ L++ + g p++  + +k++++++++e++++   +
  MMETSP1325-20131115|10313_1 728 AIGVKICAQGLEHAVaGSPIMVYSPEKGDDLNDIKEEVMKDFAS 771
                  4578888888887654899999**************99886665 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.1e-05     0.036       4     121 ..     431     553 ..     426     558 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 2.1e-05
    PF13401.1   4 agilvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapastspkellqkllsalglpakg..rltteellealqealrrrrt.....rlliiDEaqrLseealeelrsllddetgvklvl 121
                  + i+++ G   +GKT ll ++++++ +  ea   ++++  +  ++ +  e  qkl + lgl  k    l  ++        lr+r+       +l+iD ++ L ++++e +  l    +++++v+
  MMETSP1325-20131115|10313_1 431 SPICCIMGHVDTGKTKLLDKIRQTNVQTGEAGGITQQIGATYFPPEKLLEKTQKLNEDLGLVMKLpgLLVIDTPGHEAFSNLRSRGSslcdiAILVIDLMHGLEQQTVESIEMLRK--KKCPFVV 553
                  56899*******************99888888855666555555554555555555555554444543466666666666777777677777***********9999999966654..6666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1674  (0.12244); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                       135  (0.0098742); expected 13.7 (0.001)
Passed Fwd filter:                        48  (0.00351083); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 3.06u 0.41s 00:00:03.47 Elapsed: 00:00:01.38
# Mc/sec: 1917.09
//
Query:       MMETSP1325-20131115|10330_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 1016.06
//
Query:       MMETSP1325-20131115|10332_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 525.16
//
Query:       MMETSP1325-20131115|10328_1  [L=285]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-06   26.2   0.7    5.3e-06   25.7   0.5    1.2  1  PF09451.5  Autophagy-related protein 27
    0.00012   21.7   2.4     0.0016   18.0   0.1    2.2  2  PF00878.13 Cation-independent mannose-6-phosphate receptor repeat
  ------ inclusion threshold ------
      0.036   13.6   0.0      0.058   13.0   0.0    1.3  1  PF05434.6  TMEM9
       0.34   10.9  15.7       0.31   11.0   9.7    1.9  2  PF07974.8  EGF-like domain
       0.42   10.6   4.5        1.8    8.7   3.1    2.2  1  PF12661.2  Human growth factor-like EGF


Domain annotation for each model (and alignments):
>> PF09451.5  Autophagy-related protein 27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.5   1.9e-09   5.3e-06      41     227 ..      46     257 ..       5     271 .. 0.73

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 1.9e-09
    PF09451.5  41 stppsetkttyvlniCklekdasvkkedqCkkd..kriCglqsvalkddekavvtqvvdleksgegsveeeetkedegeeglevklsG.akwgekeakaelefqCdkkksgdelelkvdddkkklklelktkaaClk...............skkdkkkdgs.........gddkkdgdkkgdk...sgswgf.ftWLfillvLfvaiYlivgswlny 227
                   tp+ e + t+  n+C   + +  ++++ C +d  + + ++++v +  d ++ +  v + ++    s+  +++  d+   g+ +++ G ++  +  +  el f+C++ +s + +++ ++  ++ + +++   ++C +                k d + + s         gdd +++++++++   s + +  +t ++i+l+++ ++ l+v++++  
  MMETSP1325-20131115|10328_1  46 CTPEVEHNFTWIFNVC--GDVTAPSVPTACANDvpASVLQVNKVGTVHDLTDDMCYVAGRHSPYDESWALLDS--DDPAAGVVLSYLGdECLDGTPRLTELIFTCADRSSVNPTTA-YEVSHCHYTVTIPSWYGCPTqcpisgrklcggkghCKYDTDAQTSrcfcdngywGDDCSQQGSAHSSsssSHKASTaVTVIIIILFVVSLA-LMVTVFVMI 257
                  59**************..77888899*******6666666666666666666666677755555555555555..99999********66788999999*******9999999999.9999999*****9999998899999999999888833444444445677777786666666555555565444443155555555555444.555555433 PP

>> PF00878.13  Cation-independent mannose-6-phosphate receptor repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1     6e-07    0.0016      38     116 ..       2      86 ..       1     102 [. 0.81
   2 ?    3.7   0.1     0.016        43       4      49 ..     138     178 ..     135     198 .. 0.76

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 6e-07
                  EGGG--XXXXXXXXXXXXX.XXXXXXXXXXXXX..XXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF00878.13  38 TalACvekedveCqvtdaagneyDLssLsrkse..nweavdtsks.....akkktfyinvCkkvlpegkvegCpedaavclveknk 116
                  T + C+ ++dv C ++  ++ +y+Ls+L r+    ++  +d+        +++ t+  nvC  v+  +  + C +d+ +++++ nk
  MMETSP1325-20131115|10328_1   2 TVVNCA-MADVMCGLQVGKSATYELSDLHRTGSegSYVITDGDLPctpevEHNFTWIFNVCGDVTAPSVPTACANDVPASVLQVNK 86 
                  667798.999*******************98766799999986532221245556789*******99999******9998887665 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.016
                  -EEEEEEEE-TT-----EEE---B.TTEEEEEEEEGGG--XXXXXX CS
   PF00878.13   4 ratvitFvCnktayedapvflkeeidctyfFeweTalACvekedve 49 
                  r t + F+C + + + +p    e++ c+y  +    + C+    ++
  MMETSP1325-20131115|10328_1 138 RLTELIFTCADRS-SVNPTTAYEVSHCHYTVTIPSWYGCP----TQ 178
                  5677789998665.67888888888999999999999888....33 PP

>> PF05434.6  TMEM9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.1e-05     0.058      49     100 ..     230     280 ..     213     285 .] 0.75

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.1e-05
    PF05434.6  49 rsttiikvviiivlsiigllllymlflllldPllrkrvkaseqlqteedddd 100
                  +++t    viii+l++++l l+  +f+++ +    k ++ +++  +  dd+ 
  MMETSP1325-20131115|10328_1 230 KASTA-VTVIIIILFVVSLALMVTVFVMIRQVKAYKADASNYLALQGGDDET 280
                  34444.456777899*************998888888888887766664444 PP

>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.7     1e+04      26      32 .]     126     132 ..     126     133 .. 0.84
   2 ?   11.0   9.7   0.00011      0.31       1      32 []     179     215 ..     175     215 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 3.7
    PF07974.8  26 gyqGktC 32 
                  +y G+ C
  MMETSP1325-20131115|10328_1 126 SYLGDEC 132
                  5889999 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 0.00011
    PF07974.8   1 Csadg.liCgghGtCvkq....cgkCvCdsgyqGktC 32 
                  C+ +g  +Cgg G+C  +    + +C Cd+gy G++C
  MMETSP1325-20131115|10328_1 179 CPISGrKLCGGKGHCKYDtdaqTSRCFCDNGYWGDDC 215
                  54333567*******98899**99*******99**** PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.1   0.00066       1.8       2      13 .]     204     215 ..     203     215 .. 0.95

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00066
    PF12661.2   2 CqCppGyTGdnC 13 
                  C C+ Gy Gd+C
  MMETSP1325-20131115|10328_1 204 CFCDNGYWGDDC 215
                  99********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       921  (0.067364); expected 273.4 (0.02)
Passed bias filter:                      583  (0.0426419); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.42s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 1264.74
//
Query:       MMETSP1325-20131115|10333_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|10334_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 364.06
//
Query:       MMETSP1325-20131115|10335_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 508.61
//
Query:       MMETSP1325-20131115|10337_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.011   14.7   0.0      0.011   14.7   0.0    1.1  1  PF00613.15 Phosphoinositide 3-kinase family, accessory domain (PIK domain)


Domain annotation for each model (and alignments):
>> PF00613.15  Phosphoinositide 3-kinase family, accessory domain (PIK domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   8.1e-07     0.011     109     169 ..       2      79 ..       1      95 [. 0.75

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 8.1e-07
                  HHHCHHHHHHHGGG-SSSS..-HHHHHHHHHHTT-T...T---HHHHHHHCCC............C-CCCHCCHHHHH CS
   PF00613.15 109 lllYllQLVqalkyepikd..salarfLlkralknq...rlghflfWylksei............edkevserfgsll 169
                  l +Y++QL+  l +    d   +l+++Ll +  +n+    ++h+l W+l++ +            ++ + +e+f+ + 
  MMETSP1325-20131115|10337_1   2 LRFYIPQLTTFLLFGGLGDtaHQLQNWLLAKCASNPdglYVSHNLHWFLAAHVlpapdvlgegekDQAAAEEKFAKVS 79 
                  789***********977551158************976679*********9987777777766643334456666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|10338_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.064   13.5   0.0      0.086   13.1   0.0    1.2  1  PF12680.2 SnoaL-like domain


Domain annotation for each model (and alignments):
>> PF12680.2  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.3e-06     0.086      11      59 ..      52     105 ..      48     120 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.3e-06
                  T-HHHHHHTEEEEEEEECT.S--....E---HHHHHHHTTHHHCEECEEEEEEE CS
    PF12680.2  11 gdldalaallapdvvwedp.fge....lrGrealraffrallaafpdlrfeved 59 
                  + l++l+ +++ d v++ p +g+    ++G   + ++++ l +  p+ + +  +
  MMETSP1325-20131115|10338_1  52 KKLEGLEGCYSTDGVFTPPgGGPpertHEGWSSIQEAIEDLKNMEPMPQLTRLQ 105
                  67899************9987778899999999999999998877777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 551.61
//
Query:       MMETSP1325-20131115|10336_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   13.2   0.0      0.056   12.9   0.0    1.1  1  PF03567.9 Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF03567.9  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.1e-06     0.056     135     252 ..      10     124 ..       3     125 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.1e-06
    PF03567.9 135 feeFleclsnlaperer...nnrhwap...acdlctrmladydlvgcyetleedlnailrllallnlknvavfgltefprktqtanttrrsnstrasevevdlseklrqrleelYelDfelFey 252
                  f e+++  ++ + ++++     +h+     ++  ++ + +d+d v ++e+l++ l+++++++++ +  ++           + ++    ++++t+a     ++ ++l++ +  +Y  Df  ++y
  MMETSP1325-20131115|10336_1  10 FPEIVRAFVHDK-KCNYyfyAAEHFVSqsaFVTQNSGCANDLDTVIRLEELDDGLAELAEKVGKVQSCDMGD-----SNSASNKPGGLPSESQTMAIL---KQIPDLMKDICMIYAQDFICYDY 124
                  555555444433.56666665668777343333455799*************************55555544.....333111122222222233333...34599****************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 698.07
//
Query:       MMETSP1325-20131115|10339_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-38  130.7   0.0    5.7e-38  130.6   0.0    1.0  1  PF08704.5  tRNA methyltransferase complex GCD14 subunit
     0.0056   16.1   0.0     0.0058   16.0   0.0    1.1  1  PF01135.14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
  ------ inclusion threshold ------
      0.057   12.3   0.0      0.065   12.1   0.0    1.1  1  PF00398.15 Ribosomal RNA adenine dimethylase


Domain annotation for each model (and alignments):
>> PF08704.5  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.6   0.0   1.2e-41   5.7e-38      62     143 ..       4      85 ..       1      86 [] 0.97

  Alignments for each domain:
  == domain 1    score: 130.6 bits;  conditional E-value: 1.2e-41
    PF08704.5  62 ggfvyvlqptpeLWtlaLphRtqilytaDialiiskLevkpGsvvvesGtGsgslshaiartvaPtGhlytfefheqRaeka 143
                  +g+vyvl+ptpeLW+l+LphRtqi+y  D a+i+++L++kpGs vvesGtGsg+ls+ai+r vaP G l+tfef+e Ra+ a
  MMETSP1325-20131115|10339_1   4 RGWVYVLAPTPELWALSLPHRTQIIYELDAATIVFHLNLKPGSWVVESGTGSGALSTAIMRVVAPSGFLHTFEFNEMRARAA 85 
                  49****************************************************************************9876 PP

>> PF01135.14  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.3e-06    0.0058      62     100 ..      33      71 ..      15      84 .. 0.83

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.3e-06
                  HHHHHHHTT--TT-EEEEE------HHHHHHTTSSEEE. CS
   PF01135.14  62 valalellelkkgarvLevGsGsGyltavlarlvgekgr 100
                   a+++ +l+lk+g+ v+e G+GsG l+  + r+v ++g 
  MMETSP1325-20131115|10339_1  33 AATIVFHLNLKPGSWVVESGTGSGALSTAIMRVVAPSGF 71 
                  57788899****************999988999988874 PP

>> PF00398.15  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.4e-05     0.065      21      51 ..      35      65 ..      30      81 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.4e-05
   PF00398.15 21 eIldklnlqekdtvlEigpGkGalTeeLakr 51
                  I+ +lnl++   v+E g+G+Gal++++ + 
  MMETSP1325-20131115|10339_1 35 TIVFHLNLKPGSWVVESGTGSGALSTAIMRV 65
                 6999*********************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 420.59
//
Query:       MMETSP1325-20131115|10341_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 525.36
//
Query:       MMETSP1325-20131115|10342_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 460.10
//
Query:       MMETSP1325-20131115|10343_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-22   79.9   0.0    1.5e-22   79.6   0.0    1.1  1  PF00447.12 HSF-type DNA-binding
  ------ inclusion threshold ------
        1.2    8.2   4.0        2.1    7.4   2.0    1.7  2  PF01213.14 Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> PF00447.12  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.0   2.1e-26   1.5e-22       2     100 ..       5      95 ..       4      99 .. 0.94

  Alignments for each domain:
  == domain 1    score: 79.6 bits;  conditional E-value: 2.1e-26
   PF00447.12   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFhkvkdeekkskkkekiweFkhksFkkgkkellekikrk 100
                  F ++lye+le+ e+ +++ w e+g sf v d ++f ++vLpkyF+h +++SF RQLn+YgF+ +++  +          + h+ F +g+ +lle+ikr 
  MMETSP1325-20131115|10343_1   5 FPRRLYELLEN-ENPSVVAWAEDGASFKVNDAQTFCQQVLPKYFRHCKLTSFQRQLNLYGFNHITKGANA-------GAYLHHLFLRGRPDLLESIKRT 95 
                  8899*****98.56789***********************************************999987.......99******************97 PP

>> PF01213.14  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0     0.075   5.1e+02      37      65 ..      23      51 ..      10      59 .. 0.73
   2 ?    7.4   2.0    0.0003       2.1     218     246 ..     100     128 ..      89     139 .] 0.69

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.075
                 XXXXXXHHHHHHHHHHHHHHHHHHHHHHH CS
   PF01213.14 37 aavagdpasveafdelvakalsefvelsk 65
                  a +g++  v++ ++++++ l ++ +  k
  MMETSP1325-20131115|10343_1 23 WAEDGASFKVNDAQTFCQQVLPKYFRHCK 51
                 35566777788999999999999987655 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0003
                  CSC--XXXXXXXXXXXXXXXXXXXX.... CS
   PF01213.14 218 aksalaavsasktaaPppPpppppPsvdt 246
                  ++sa+aa +a++t aPppP  ++p  v++
  MMETSP1325-20131115|10343_1 100 NNSAAAAAAAAATMAPPPPQNASPMGVPV 128
                  56788899999999999997776654443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       390  (0.0285255); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 740.21
//
Query:       MMETSP1325-20131115|10344_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.53
# Mc/sec: 420.49
//
Query:       MMETSP1325-20131115|10346_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 263.13
//
Query:       MMETSP1325-20131115|10348_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-19   69.3   0.0    3.4e-19   69.1   0.0    1.0  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
    3.1e-05   24.1   0.0    5.4e-05   23.3   0.0    1.6  2  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
     0.0004   20.3   0.0    0.00046   20.1   0.0    1.2  1  PF01488.15 Shikimate / quinate 5-dehydrogenase
  ------ inclusion threshold ------
      0.012   15.2   0.0      0.014   15.0   0.0    1.2  1  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
      0.021   14.3   0.0      0.026   14.0   0.0    1.2  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
      0.073   12.3   0.0      0.085   12.1   0.0    1.2  1  PF02558.11 Ketopantoate reductase PanE/ApbA
       0.12   12.2   0.0       0.13   12.1   0.0    1.2  1  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   0.0   1.8e-22   3.4e-19       4     108 ..       9     115 ..       7     116 .] 0.97

  Alignments for each domain:
  == domain 1    score: 69.1 bits;  conditional E-value: 1.8e-22
                  BEEB-------HHHHHHHH---EEEE--SSHHHHHHHHHTT...EEE-SSHHHHHHHBSEEEE-SSSHHHHHHHHHH.HCCC-----EEEE-S---HHHHHHHHHHHH CS
   PF03446.10   4 igfiGlGvMGspmalnllkagyevavynrtkekveelvaeg...akaaesieelvasldvvilmvkagkavdeviegellealekgdilidgstsspedtrelakelk 108
                  +gfiG+G+MG  ma+nllk+++ ++++nrt++++++l+ae    ++ ++++ee+va++ + + m+++ +a d+v  + +l+ + +g+ ++ + t  pe  +e+ ++++
  MMETSP1325-20131115|10348_1   9 MGFIGVGIMGLGMASNLLKNNQPLVIWNRTASACDSLLAEYpslCTRVDTPEEVVAACAITWSMLSTLEASDAVFPS-VLSSVGPGKSIVYCATFTPERMQEMDAAVT 115
                  79**************************************889999*******************************.************************998875 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   2.8e-08   5.4e-05       2      61 ..       9      65 ..       8     100 .. 0.83
   2 ?   -1.8   0.0       1.9   3.8e+03      26      43 ..      94     111 ..      81     115 .. 0.67

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 2.8e-08
   PF03807.12  2 igiiGaGnigealakglaaagaqkheviiaasrspekaeelaeelgvkvtavsn.eeaaee 61
                 +g+iG G +g ++a++l++++   +  +i  +r+++   +l +e+   +t v++ ee++++
  MMETSP1325-20131115|10348_1  9 MGFIGVGIMGLGMASNLLKNN---QPLVIW-NRTASACDSLLAEYPSLCTRVDTpEEVVAA 65
                 69*******************...999966.**************9666655441445544 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 1.9
   PF03807.12  26 heviiaasrspekaeela 43 
                  +++++ a+ +pe+++e+ 
  MMETSP1325-20131115|10348_1  94 KSIVYCATFTPERMQEMD 111
                  566666677777777765 PP

>> PF01488.15  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   2.4e-07   0.00046      16      84 ..      10      74 ..       6     114 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 2.4e-07
                 EEE----HHHHHGGG--TTT-E.EEE----HHHHHHHHHHH...T-EE---S-HHHHHHT-SEEEE-S- CS
   PF01488.15 16 lviGAGemarlvakhLlekgvkkiviaNRtaekakeLaeelggeevealpleeleellaeadvvisats 84
                   iG G m+  +a++Ll+++   +vi NRta+  + L++e+++     ++++  ee+ a +++  s  s
  MMETSP1325-20131115|10348_1 10 GFIGVGIMGLGMASNLLKNNQP-LVIWNRTASACDSLLAEYPSL---CTRVDTPEEVVAACAITWSMLS 74
                 57***************77655.9*****************555...8888888888888888766554 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   7.1e-06     0.014       2      41 ..       9      48 ..       8      89 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 7.1e-06
                 EEEE-------HHHHHHHTTEEEEEEE-S-HHHHHHHHHH CS
   PF01210.18  2 vavlGaGswGtalAkvlaenghevrlWvreeklieeiner 41
                 ++ +G G +G  +A+ l +n+++ ++W r ++ ++++ ++
  MMETSP1325-20131115|10348_1  9 MGFIGVGIMGLGMASNLLKNNQPLVIWNRTASACDSLLAE 48
                 5789***************************999988765 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.3e-05     0.026       4      50 ..      11      57 ..       9      87 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.3e-05
                 EE---------HHHHHCT.SEEEEE-S-HHHHHHHHHHSHHHHHTTC CS
   PF02737.13  4 VvGaGtmGagiAavfaragleVvlvdiseealekalerieksleklv 50
                  +G G+mG g+A+ +++++ + v+++++++a ++ l++  + + ++ 
  MMETSP1325-20131115|10348_1 11 FIGVGIMGLGMASNLLKNNQPLVIWNRTASACDSLLAEYPSLCTRVD 57
                 69****************************99999988877666554 PP

>> PF02558.11  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.4e-05     0.085       3      45 ..      11      55 ..       9      86 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.4e-05
                 EE-----------HHHHHHH-EEEE----.HHHH.HH----EEE- CS
   PF02558.11  3 ilGaGaiGsllaakLakagadvtlilrsr.rlea.lkknglrlks 45
                  +G G +G  +a +L k++   ++++r++  +++ l +  +  ++
  MMETSP1325-20131115|10348_1 11 FIGVGIMGLGMASNLLKNNQPLVIWNRTAsACDSlLAEYPSLCTR 55
                 59***************************8888855555554444 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   6.7e-05      0.13       3      51 ..      12      61 ..      11      96 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.7e-05
    PF13738.1  3 vGAGaaGlafadnlleegatpliivDrnakpGghwlkaysf..vrlhqpsf 51
                 +G G +Gl++a nll+++   l+i  r a+  ++ l  y+   +r+ +p+ 
  MMETSP1325-20131115|10348_1 12 IGVGIMGLGMASNLLKNNQP-LVIWNRTASACDSLLAEYPSlcTRVDTPEE 61
                 799**************988.999999988888877555443455555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|10349_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 212.51
//
Query:       MMETSP1325-20131115|10357_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 325.22
//
Query:       MMETSP1325-20131115|10356_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-24   85.7  24.0    1.7e-06   28.3   0.3    7.5  7  PF08238.7 Sel1 repeat
  ------ inclusion threshold ------
      0.066   13.1   0.3         15    5.5   0.0    2.6  2  PF12688.2 Tetratrico peptide repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   2.6e-07    0.0018       8      38 ..       2      29 ..       1      30 [. 0.90
   2 !   10.9   0.6   7.6e-05      0.52      13      39 .]      57      79 ..      31      79 .. 0.73
   3 !   23.5   0.1   8.4e-09   5.7e-05       2      36 ..      81     113 ..      80     115 .. 0.91
   4 !   13.9   0.1   8.4e-06     0.057       1      38 [.     116     151 ..     116     152 .. 0.72
   5 !   28.3   0.3   2.5e-10   1.7e-06       1      39 []     153     190 ..     153     190 .. 0.88
   6 ?    1.3   0.0     0.078   5.3e+02       1       8 [.     191     198 ..     191     217 .. 0.78
   7 ?   -0.2   0.1      0.23   1.5e+03      29      36 ..     228     235 ..     225     238 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 2.6e-07
    PF08238.7  8 GlyymylnGlgGvpkdpekAleWyekAAeqG 38
                 +  ++ ++G+ Gv +d+++A+ +y+ AA++G
  MMETSP1325-20131115|10356_1  2 A--LCIERGD-GVARDKSRAILLYREAAQAG 29
                 6..6778**8.9*****************98 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 7.6e-05
    PF08238.7 13 ylnGlgGvpkdpekAleWyekAAeqGh 39
                 +++G+  +   +++A+ W++ AA++G+
  MMETSP1325-20131115|10356_1 57 LEDGR--L--ALDEAVVWLRHAADRGS 79
                 34554..3..4789**********995 PP

  == domain 3    score: 23.5 bits;  conditional E-value: 8.4e-09
    PF08238.7   2 eAqynLGlyymylnGlgGvpkdpekAleWyekAAe 36 
                  eA+  LG  ++y++G+g + +d + Al +++kAAe
  MMETSP1325-20131115|10356_1  81 EAMVHLG--QIYERGGGSIRRDSSAALALFCKAAE 113
                  8******..999***855999*************8 PP

  == domain 4    score: 13.9 bits;  conditional E-value: 8.4e-06
    PF08238.7   1 aeAqynLG..lyymylnGl.gGvpkdpekAleWyekAAeqG 38 
                  ++A+++ G  l    ++ l +Gv    +k++e+ye+AA+ G
  MMETSP1325-20131115|10356_1 116 PKAAFYAGniL----WDQLrDGVGS-IDKCIEYYELAANGG 151
                  67899999433....4444446654.679*********987 PP

  == domain 5    score: 28.3 bits;  conditional E-value: 2.5e-10
    PF08238.7   1 aeAqynLGlyymylnGl.gGvpkdpekAleWyekAAeqGh 39 
                  a+Aq++LG   +y++G+  G+p    kA  W+++AA++Gh
  MMETSP1325-20131115|10356_1 153 ADAQNALG--VIYEDGWgQGLPMSVPKAQAWFKLAADNGH 190
                  79******..6669***8558777999************9 PP

  == domain 6    score: 1.3 bits;  conditional E-value: 0.078
    PF08238.7   1 aeAqynLG 8  
                  a A+ynL+
  MMETSP1325-20131115|10356_1 191 AIAAYNLA 198
                  579****9 PP

  == domain 7    score: -0.2 bits;  conditional E-value: 0.23
    PF08238.7  29 eWyekAAe 36 
                  ++y +AA+
  MMETSP1325-20131115|10356_1 228 HYYARAAR 235
                  79****97 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0021        15      16      36 ..      14      34 ..       8      54 .. 0.82
   2 ?    5.1   0.0     0.003        20      11      37 ..     131     157 ..     116     163 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0021
    PF12688.2 16 eeakAvplYrrAlaaGLagar 36
                 ++ +A+ lYr+A +aG+++a 
  MMETSP1325-20131115|10356_1 14 DKSRAILLYREAAQAGVDDAC 34
                 5679*************9875 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.003
    PF12688.2  11 rDstGeeakAvplYrrAlaaGLagarr 37 
                  rD +G+ +k ++ Y+ A + G+a+a++
  MMETSP1325-20131115|10356_1 131 RDGVGSIDKCIEYYELAANGGVADAQN 157
                  799********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.59
# Mc/sec: 970.73
//
Query:       MMETSP1325-20131115|10358_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       611  (0.0446899); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.49
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|10352_1  [L=512]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       563  (0.0411791); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.89u 0.38s 00:00:01.27 Elapsed: 00:00:00.66
# Mc/sec: 1858.99
//
Query:       MMETSP1325-20131115|10359_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.48
# Mc/sec: 264.60
//
Query:       MMETSP1325-20131115|10353_1  [L=457]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-21   74.7   0.7    5.7e-21   73.7   0.5    1.6  1  PF01248.21 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family


Domain annotation for each model (and alignments):
>> PF01248.21  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.7   0.5   4.2e-25   5.7e-21      16      90 ..     327     402 ..     316     407 .. 0.90

  Alignments for each domain:
  == domain 1    score: 73.7 bits;  conditional E-value: 4.2e-25
                  EE---HHHHHHHHH-TECEEEEETTTSSGGHHCHHHHHHHHTTEEEEEESTTTTHHHHHHHTST.-SEEEECE-TT CS
   PF01248.21  16 lvlGlkevtkalergeaklviiAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrp.vsalaikdegd 90 
                  ++ Glk+vt ++e ++aklviiA+dv+p+e + +l+alc++++vpy++vk+k +LG+lv +k + + +l+ +++ d
  MMETSP1325-20131115|10353_1 327 IKFGLKHVTALVEEKKAKLVIIASDVDPIELVVWLPALCRKMDVPYCIVKNKSRLGALVYQKNAtALCLTSVNKAD 402
                  799***********************************************************99666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.35s 00:00:01.10 Elapsed: 00:00:00.51
# Mc/sec: 2147.32
//
Query:       MMETSP1325-20131115|10364_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.072   12.9   4.0       0.38   10.5   2.8    2.2  1  PF00053.19 Laminin EGF-like (Domains III and V)
        2.5    7.7   6.3        1.2    8.7   0.1    2.7  3  PF11575.3  FhuF 2Fe-2S C-terminal domain


Domain annotation for each model (and alignments):
>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.8   5.6e-05      0.38      21      49 .]      55      83 ..      30      88 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 5.6e-05
                 SBSTTEE---S-EE----B-TTTTGGGSS CS
   PF00053.19 21 lCkenveGrkCdrCkpgyyglpsdsgegC 49
                 +C e+ +G  C  C++ y+ ++ +s++ C
  MMETSP1325-20131115|10364_1 55 SCSEGAAGILCGSCAEAYFLKDGKSCKRC 83
                 69*****************8766777666 PP

>> PF11575.3  FhuF 2Fe-2S C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       0.8   5.4e+03      19      21 ..      16      18 ..      15      18 .. 0.83
   2 ?    1.9   0.1     0.023   1.5e+02      15      19 ..      64      68 ..      58      69 .. 0.85
   3 ?    8.7   0.1   0.00017       1.2       8      21 ..      72      85 ..      71      86 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.8
    PF11575.3 19 CPl 21
                 CPl
  MMETSP1325-20131115|10364_1 16 CPL 18
                 **8 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.023
    PF11575.3 15 yCgtC 19
                 +Cg+C
  MMETSP1325-20131115|10364_1 64 LCGSC 68
                 6**** PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.00017
    PF11575.3  8 YrlpggeyCgtCPl 21
                 Y l++g  C  CP+
  MMETSP1325-20131115|10364_1 72 YFLKDGKSCKRCPK 85
                 99***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 808.77
//
Query:       MMETSP1325-20131115|10366_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-42  145.3   0.0    1.9e-42  145.1   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    6.1e-39  133.6   0.0    7.6e-39  133.3   0.0    1.1  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.1   0.0   2.7e-46   1.9e-42     108     257 ..       2     142 ..       1     144 [. 0.93

  Alignments for each domain:
  == domain 1    score: 145.1 bits;  conditional E-value: 2.7e-46
                  HHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---T.TSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
   PF07714.12 108 falqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpe.kcpeelyelmkqCweeepeeRptfkelve 257
                  +a ++a++meyL+++k++Hrd+ + N+L++++ +vk++DfGL++++         +++     +mapE+l++++f++  Dv++fG+llwE+ft ge p++g++  ++++++++g+rl+ p+ ++p e+ +++++Cw+++p+ Rptf+e+  
  MMETSP1325-20131115|10366_1   2 IANDVASAMEYLHENKIIHRDIKSHNCLVTSNGIVKLCDFGLVKTK---------NTQAGTPAYMAPELLENTNFNKSVDVYAFGILLWELFT-GEVPFAGYEIPDIINQVTSGNRLRVPTvDTPVEMRRMIEDCWAQDPDARPTFAEILV 142
                  7899***************************************998.........33445668******************************.99**********************99746899**********************975 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.3   0.0   1.1e-42   7.6e-39     103     255 ..       2     141 ..       1     143 [. 0.87

  Alignments for each domain:
  == domain 1    score: 133.3 bits;  conditional E-value: 1.1e-42
                  HHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHH.TTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHH CS
   PF00069.20 103 ialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilk.kkleedepkssskseelkdlikkllekdpakRltaeeil 255
                  ia  +++++eylH+n+iiHrD+K++N+L++++g +k++DFGl k       + +t+ gt+ YmAPE+l+ +++  k+vDv+++G++l+el+tg++pf g    +   +i+++ + ++l+ +   +  ++ e++ +i++++++dp++R+t++eil
  MMETSP1325-20131115|10366_1   2 IANDVASAMEYLHENKIIHRDIKSHNCLVTSNGIVKLCDFGLVK-------TKNTQAGTPAYMAPELLE-NTNFNKSVDVYAFGILLWELFTGEVPFAGY---EIPDIINQVTSgNRLRVPTV-D--TPVEMRRMIEDCWAQDPDARPTFAEIL 141
                  7899**************************************97.......58899*************.****************************99...44444444444034444433.2..3489*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 831.68
//
Query:       MMETSP1325-20131115|10367_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       449  (0.0328408); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 445.72
//
Query:       MMETSP1325-20131115|10368_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-05   24.5   5.2    3.4e-05   24.0   3.6    1.2  1  PF04116.8 Fatty acid hydroxylase superfamily
  ------ inclusion threshold ------
       0.14   11.8   0.5       0.27   10.9   0.4    1.4  1  PF06716.6 Protein of unknown function (DUF1201)


Domain annotation for each model (and alignments):
>> PF04116.8  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   3.6     5e-09   3.4e-05      40     114 .]       2      78 ..       1      78 [. 0.87

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 5e-09
    PF04116.8  40 altafrihplealllalllllllllllgtsllvillvvllgallylltHsgv..hhrlkpllsylfvlpayHrlHHs 114
                  ++++f++hp+eal+    +l++++ ++g  +  ++ v+++ a+l+l+ H+g+  ++  k+l + +++++a+H+ HH+
  MMETSP1325-20131115|10368_1   2 PFAGFAVHPVEALVTFGPVLFAMCPWVGLCIPLHYPVLAFLAILNLYLHCGYqiWIVEKTLAPLFINTSAFHNAHHF 78 
                  678999********9999998888888888888889****************6556666777888889999*****7 PP

>> PF06716.6  Protein of unknown function (DUF1201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.4     4e-05      0.27       3      49 ..      31      78 ..      30      82 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4e-05
    PF06716.6  3 cvlrsylllafGfliclflfclvvfiWfvykqi..lfrttaqsnearfn 49
                 c+   y +laf  ++ l+l c    iW v k +  lf +t+   +a + 
  MMETSP1325-20131115|10368_1 31 CIPLHYPVLAFLAILNLYLHCG-YQIWIVEKTLapLFINTSAFHNAHHF 78
                 66667999*************7.57******98779***9998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.30s 00:00:00.67 Elapsed: 00:00:00.45
# Mc/sec: 633.70
//
Query:       MMETSP1325-20131115|10362_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-25   88.8  18.7    2.6e-11   43.0   0.5    3.3  3  PF00397.21 WW domain
     0.0079   16.1   0.1      0.015   15.2   0.1    1.4  1  PF11669.3  WW domain-binding protein 1
  ------ inclusion threshold ------
      0.047   13.7   0.1      0.087   12.8   0.0    1.5  1  PF13908.1  Wnt and FGF inhibitory regulator


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.5   1.6e-09   7.1e-06       5      31 .]     149     174 ..     145     174 .. 0.87
   2 !   29.8   2.9   7.7e-11   3.5e-07       2      31 .]     182     210 ..     181     210 .. 0.90
   3 !   43.0   0.5   5.8e-15   2.6e-11       1      31 []     218     247 ..     218     247 .. 0.90

  Alignments for each domain:
  == domain 1    score: 25.6 bits;  conditional E-value: 1.6e-09
                  EE.E.E.E----EEEEETTT--EESS-- CS
   PF00397.21   5 We.ersddddGrvYYyNheTgetqWekP 31 
                  W+ +++ +   r+YY+N+ Tge+ We P
  MMETSP1325-20131115|10362_1 149 WKkMVD-EY-DRPYYVNQDTGESAWEIP 174
                  996666.56.****************98 PP

  == domain 2    score: 29.8 bits;  conditional E-value: 7.7e-11
                  --SEEE.E.E----EEEEETTT--EESS-- CS
   PF00397.21   2 ppgWeersddddGrvYYyNheTgetqWekP 31 
                  p +W e +d+  +r+Y+yN+eT e+ W++P
  MMETSP1325-20131115|10362_1 182 PSPWIESVDEH-QRKYFYNTETHESRWTDP 210
                  677*9999766.*****************9 PP

  == domain 3    score: 43.0 bits;  conditional E-value: 5.8e-15
                  ---SEEE.E.E-.---EEEEETTT--EESS-- CS
   PF00397.21   1 lppgWeersddd.dGrvYYyNheTgetqWekP 31 
                  lp gW++  + d +Gr YYyN++Tg++qW+kP
  MMETSP1325-20131115|10362_1 218 LPAGWQI-IP-DsSGREYYYNATTGQSQWDKP 247
                  799**76.94.669*****************9 PP

>> PF11669.3  WW domain-binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   3.3e-06     0.015      19      47 ..      31      63 ..      25      88 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 3.3e-06
    PF11669.3 19 yelWyfWlvwvliiilal....lcayslrrkkr 47
                 ye+ +fW+  vl++i+++    +c + ++++kr
  MMETSP1325-20131115|10362_1 31 YEIPFFWCWVVLLVIICVcipgCCLCAKKKNKR 63
                 788899997665555544234457777777765 PP

>> PF13908.1  Wnt and FGF inhibitory regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.9e-05     0.087      90     124 ..      40      77 ..      33     139 .. 0.49

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.9e-05
    PF13908.1  90 fivvlivift...cskcvlekavrrqrpvvtsassttv 124
                  +++ +i++++   c+ c ++k +r  rp  ++  ++  
  MMETSP1325-20131115|10362_1  40 VVLLVIICVCipgCCLCAKKKNKRGARPGGVAKAAAPK 77 
                  33344444441114444444545555554443333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       820  (0.0599766); expected 273.4 (0.02)
Passed bias filter:                      552  (0.0403745); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.63
# Mc/sec: 1004.19
//
Query:       MMETSP1325-20131115|10365_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.76    8.9   4.3       0.84    8.7   3.0    1.1  1  PF09309.5 FCP1, C-terminal


Domain annotation for each model (and alignments):
>> PF09309.5  FCP1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.0   6.1e-05      0.84      40      97 ..      27      78 ..       2      89 .. 0.67

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 6.1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXX.....XXXXXXXXXXXXXX CS
    PF09309.5 40 lfhpapirlkaqPgPevriydsvtGklirkgaqasapaplqapsssslsdkgepsslr 97
                   ++api +ka+P+  vr+   + G l    +qa+apap  ap+++s s++   s l 
  MMETSP1325-20131115|10365_1 27 QPQAAPIDAKATPASLVRLQ--NDGAL----SQAPAPAPAPAPAPASASERSPRSLLS 78
                 23568999*********995..67887....566666666688888888777666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 420.49
//
Query:       MMETSP1325-20131115|10371_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.70
# Mc/sec: 643.59
//
Query:       MMETSP1325-20131115|10373_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 728.89
//
Query:       MMETSP1325-20131115|10372_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.62
# Mc/sec: 371.05
//
Query:       MMETSP1325-20131115|10361_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-05   22.1  10.9    0.00014   21.1   0.7    2.6  2  PF05757.6 Oxygen evolving enhancer protein 3 (PsbQ)
      0.003   17.2   0.2     0.0062   16.2   0.1    1.5  1  PF10606.4 Homer-binding domain of metabotropic glutamate receptor
  ------ inclusion threshold ------
        6.2    6.9  10.2       0.53   10.3   2.1    2.4  2  PF10518.4 TAT (twin-arginine translocation) pathway signal sequence


Domain annotation for each model (and alignments):
>> PF05757.6  Oxygen evolving enhancer protein 3 (PsbQ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   2.0    0.0021       9.7      16      56 ..      23      58 ..       8      77 .. 0.76
   2 !   21.1   0.7   3.2e-08   0.00014     108     197 ..     124     206 ..     118     211 .] 0.84

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0021
                 XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX- CS
    PF05757.6 16 glvvrasaeeaeqqtsRravlgslvAtalagaasaqavlaa 56
                 +++vr sa      +sRr   g l+A a+a +a++++++a 
  MMETSP1325-20131115|10361_1 23 RTAVRMSA-----DSSRREFAGKLAAGAAAMGAASAPAQAS 58
                 56677777.....789****997777777777777777765 PP

  == domain 2    score: 21.1 bits;  conditional E-value: 3.2e-08
                  HHHHHH..HTTHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHH---HHHHHHH CS
    PF05757.6 108 esakdi..lalkelidkkawtyvrndLRlkasyLrfDlktlisakpkeekkslldlakkLfdnleeLDkaartKdveeaekyYektksslde 197
                  es+k++  + + + i +kaw++v+++L ++     + + +++++++ +       lak +++++e L+ a+  K++e a+++Yek ++  d+
  MMETSP1325-20131115|10361_1 124 ESEKRLksAVIPKAISRKAWSEVTTELSRQL----YSMRKAMNSVGGDPA-----LAKTFYQDIEALNLACLRKKQEVAQAAYEKSVADFDK 206
                  6667764334568899***********9996....778899999999965.....67****************************9987775 PP

>> PF10606.4  Homer-binding domain of metabotropic glutamate receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   1.4e-06    0.0062      14      36 ..      93     114 ..      86     122 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1.4e-06
    PF10606.4  14 sgssspsSPvSESiLctpsnaeY 36 
                  s  s++ SPvSES+L+++ +aeY
  MMETSP1325-20131115|10361_1  93 SAYSPF-SPVSESSLSPAKKAEY 114
                  444555.6**************9 PP

>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.5      0.16   7.1e+02      11      21 ..       5      15 ..       1      20 [. 0.52
   2 ?   10.3   2.1   0.00012      0.53       2      25 ..      32      55 ..      31      56 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.16
    PF10518.4 11 gaaaaAaaalg 21
                  ++a A+++++
  MMETSP1325-20131115|10361_1  5 VLVALALVGAS 15
                 44444444443 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00012
    PF10518.4  2 lsRRqfLkggaaaaAaaalggala 25
                  sRR f   +aa+aAa+++++a a
  MMETSP1325-20131115|10361_1 32 SSRREFAGKLAAGAAAMGAASAPA 55
                 69******9********9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       552  (0.0403745); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.65
# Mc/sec: 777.89
//
Query:       MMETSP1325-20131115|10375_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 311.02
//
Query:       MMETSP1325-20131115|10376_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 357.01
//
Query:       MMETSP1325-20131115|10377_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1038.42
//
Query:       MMETSP1325-20131115|10374_1  [L=404]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-23   81.9   0.0      4e-23   81.3   0.0    1.2  1  PF04858.8 TH1 protein
  ------ inclusion threshold ------
       0.11   11.1   0.0       0.29    9.7   0.0    1.6  2  PF04078.8 Cell differentiation family, Rcd1-like


Domain annotation for each model (and alignments):
>> PF04858.8  TH1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   0.0   5.9e-27     4e-23     206     562 ..       4     373 ..       2     382 .. 0.82

  Alignments for each domain:
  == domain 1    score: 81.3 bits;  conditional E-value: 5.9e-27
    PF04858.8 206 ileageddvrraieelakmvCqsihtYvfsqlllavLsre..edgata.....................akrlseeiek...aaakkngaatvirla..Lat....sav...dpqakqaladlLsrgaLaaaDikvLlelyvssdkPpv.ellrnPdvLellidelfkvgvki.nnelkskylellalaasvvetpkkkrvdeeiskDelkatikalekavaivenak..rGeselkaeleklyncirvPvvavGvikavesavteesyfklvtdsnevhlavLdevakkhvaLqgqvLelLvklveskqdeLeilvqlelkkallDrmveLlarGhvlPvvtyiakslrredldislirYfvtevLeiigpPYsrdfvvlllplleseeirkkmr 562
                  +l+  e d+  ++++l+ m+  s   Y +s  ll  + +   +dg+                        +rl +e+e+    aa  +g    + +a  Lat    +av   +p   q l  +L +ga++a ++  L +  ++sd+ +v ++lr+ dv++ll+ ++f  g      +  +k+  lla+aa          +d+e + ++ +a   ale a  ++ +++  +G+++  ae +kl + +r+Pvva+Gv++++  +v+ +    + + + +++l++ +   + h   +++ Le L +++ sk    +      l+k      v L++ G+v Pv++ ++    r  l+   +  f++ v  +++pPYsr fv  +  ++ +  + + ++
  MMETSP1325-20131115|10374_1   4 FLDMSEKDLDTMVDNLNTMCSASDFMYFYSHRLLHGVEHAlcSDGGGVhidgeatgssgsdransraskYRRLRQELEEgvtSAAGSHGSKMRRSFArqLATgdstTAVeqsNPALVQGLLTMLEKGAVSAEELS-LCHEAIGSDRSAVpSVLRQTDVIQLLLRSMFMKGSLAeDADAVDKCSRLLAFAAC---------ADDEAEAEDTRA---ALEGASRLCLDKStlKGTDQGPAE-QKLRSHMRFPVVAAGVLAWMLATVQGP----INQTAMDTLLQLAQFAIEEHPFQRPAALEFLAAVMTSKFVAGA------LQKDAAQVAVFLMTTGFVQPVLKFMESNGDR--LERGVVCAFIDRVAAVASPPYSRSFVEGMAAFISKPAVMEALK 373
                  7888999*************************99865443223333334699999************99999999999743356667777777777777655111123311134456777889999****99997.66667899977774579**************998876478999***********9.........566666666566...********9998733677777777.789999*******************99....6889999****99999999******************976555......5899999******************999999..999***********************99988887766666665 PP

>> PF04078.8  Cell differentiation family, Rcd1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.32   2.2e+03     126     148 ..     146     168 ..     141     174 .. 0.78
   2 ?    9.7   0.0   4.3e-05      0.29     119     162 ..     296     340 ..     282     347 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 0.32
    PF04078.8 126 sddkevinflleteiiplclrim 148
                  sd ++v + l +t++i l lr m
  MMETSP1325-20131115|10374_1 146 SDRSAVPSVLRQTDVIQLLLRSM 168
                  67777888888999999999988 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 4.3e-05
    PF04078.8 119 vIgalvksddkevinflleteiiplclrime.tgselsk.tvatfi 162
                  v ga +++d  +v  fl++t ++   l+ me +g+ l + +v++fi
  MMETSP1325-20131115|10374_1 296 VAGA-LQKDAAQVAVFLMTTGFVQPVLKFMEsNGDRLERgVVCAFI 340
                  5555.5779999******************9458889883456666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.32s 00:00:01.06 Elapsed: 00:00:00.43
# Mc/sec: 2251.46
//
Query:       MMETSP1325-20131115|10379_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.29   11.3   2.6       0.34   11.1   1.8    1.1  1  PF06156.8 Protein of unknown function (DUF972)
       0.34   10.5   1.4       0.61    9.7   0.9    1.6  1  PF06955.7 Xyloglucan endo-transglycosylase (XET) C-terminus


Domain annotation for each model (and alignments):
>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.8   4.9e-05      0.34       5      48 ..      15      61 ..      12      62 .] 0.82

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.9e-05
    PF06156.8  5 elfdklseleeqleelleeleelkke...lkelleenaelklenekl 48
                 +l+d++++lee +++ ++++ e++++   ++ell  n++l +en kl
  MMETSP1325-20131115|10379_1 15 SLYDEIARLEELTRTQQRQMMEVQTQqlqFNELLRFNQSLAMENLKL 61
                 589999999999999999999988752226789999********887 PP

>> PF06955.7  Xyloglucan endo-transglycosylase (XET) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.9     9e-05      0.61      15      33 ..      25      43 ..      12      57 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 9e-05
                 S--HHHHHHHHHHHHHTEE CS
    PF06955.7 15 sLdatqrrrmrwvqkkymi 33
                 +L++tq+r+m  vq++ + 
  MMETSP1325-20131115|10379_1 25 ELTRTQQRQMMEVQTQQLQ 43
                 3*************98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       980  (0.0716793); expected 273.4 (0.02)
Passed bias filter:                      662  (0.0484201); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.44s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|10381_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 357.28
//
Query:       MMETSP1325-20131115|10380_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-38  129.8  18.9    3.1e-10   39.4   0.1    5.0  5  PF13414.1  TPR repeat
    2.1e-34  115.6  17.0      8e-08   31.4   0.0    8.1  8  PF00515.23 Tetratricopeptide repeat
      1e-28   96.7  15.6    1.6e-06   27.4   0.1    8.1  8  PF07719.12 Tetratricopeptide repeat
    4.7e-25   85.5  10.1    0.00034   20.4   0.0    6.0  6  PF13431.1  Tetratricopeptide repeat
    9.3e-21   71.8  24.5     0.0001   21.7   0.0    7.4  7  PF13181.1  Tetratricopeptide repeat
    6.3e-20   71.2   1.5    4.6e-05   23.8   0.0    5.3  5  PF13432.1  Tetratricopeptide repeat
      4e-17   61.0   0.2    5.6e-05   23.3   0.0    6.2  6  PF13428.1  Tetratricopeptide repeat
    5.9e-16   58.0  18.4    6.6e-08   32.2   0.1    5.4  5  PF13424.1  Tetratricopeptide repeat
    2.2e-15   55.0   9.6     0.0087   15.6   0.0    7.0  7  PF13176.1  Tetratricopeptide repeat
    2.7e-09   36.7   9.3      0.069   13.5   0.0    6.7  6  PF13174.1  Tetratricopeptide repeat
    4.2e-08   32.8   0.0    3.9e-05   23.3   0.0    3.5  4  PF13371.1  Tetratricopeptide repeat
    6.3e-07   29.7   2.1       0.23   12.0   0.0    5.6  5  PF08238.7  Sel1 repeat
    6.9e-05   22.8  16.4     0.0089   16.0   0.3    4.9  5  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    0.00015   21.3   6.8     0.0044   16.5   0.0    3.3  4  PF06552.7  Plant specific mitochondrial import receptor subunit TOM20
    0.00023   20.8  12.7        1.5    8.6   0.2    5.6  6  PF04212.13 MIT (microtubule interacting and transport) domain
    0.00051   19.0  11.5       0.19   10.6   0.5    3.6  2  PF02259.18 FAT domain
  ------ inclusion threshold ------
      0.018   14.2   0.3      0.018   14.2   0.2    1.1  1  PF01663.17 Type I phosphodiesterase / nucleotide pyrophosphatase
      0.021   14.5   0.1       0.42   10.3   0.0    2.5  2  PF07738.8  Sad1 / UNC-like C-terminal
      0.068   12.3   1.4         11    5.2   0.0    3.7  3  PF10516.4  SHNi-TPR
       0.22   10.8  16.7      0.055   12.8   2.1    2.8  3  PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
       0.23   10.9   5.4        2.5    7.6   0.8    3.4  4  PF04781.7  Protein of unknown function (DUF627)
       0.59    8.4   9.4        1.1    7.6   1.8    3.0  3  PF05833.6  Fibronectin-binding protein A N-terminus (FbpA)
        1.6    7.9   8.4       0.53    9.5   0.6    3.3  4  PF10602.4  26S proteasome subunit RPN7


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   1.6   4.9e-10   2.9e-07      15      49 ..       3      37 ..       1      56 [. 0.89
   2 !   39.4   0.1   5.2e-13   3.1e-10      19      69 .]      64     113 ..      56     113 .. 0.93
   3 !   36.2   0.0     5e-12   2.9e-09       5      48 ..     118     161 ..     114     165 .. 0.93
   4 !   32.7   0.8   6.4e-11   3.8e-08      19      68 ..     166     229 ..     164     230 .. 0.93
   5 !    9.1   0.1    0.0015      0.87      19      34 ..     215     230 ..     212     238 .. 0.77

  Alignments for each domain:
  == domain 1    score: 29.9 bits;  conditional E-value: 4.9e-10
    PF13414.1 15 kegdydeAieayekAleldpnnaelyynlAlaylk 49
                 +++d+++Ai++ye+A+ ++++n+e++ynlA a ++
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQAILYNKKNPEYFYNLANAIQE 37
                 6789**************************99765 PP

  == domain 2    score: 39.4 bits;  conditional E-value: 5.2e-13
    PF13414.1  19 ydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                  +  A ++y + ++ldpn+  ++ynl+++ ++l   +++A++ +++Al+l P
  MMETSP1325-20131115|10380_1  64 LTRAQKMYMEVIKLDPNHHAAWYNLGYVQEELQ-LFDSAIRSFSEALKLEP 113
                  66899**************************95.***************98 PP

  == domain 3    score: 36.2 bits;  conditional E-value: 5e-12
    PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnaelyynlAlayl 48 
                  a  +lGn +++  ++de+i +y+kA+eld+ +   +ynlA ay 
  MMETSP1325-20131115|10380_1 118 AIINLGNTYMNSEKFDESIIQYKKAIELDSTCVMSHYNLASAYH 161
                  5679**************************************95 PP

  == domain 4    score: 32.7 bits;  conditional E-value: 6.4e-11
    PF13414.1  19 ydeAieayekAleldpnnaelyynlAlaylklg..............kdyeeAledyekAleld 68 
                   + A ++++ A++l +++a++++nl+ +y+  g              + ye+Al++y++Al+ld
  MMETSP1325-20131115|10380_1 166 IKSAMKYFKSAIALKSDYADAHFNLGICYQDEGaklketgkdkktmlEFYESALKHYKEALRLD 229
                  678*****************************9999999999888888899***********98 PP

  == domain 5    score: 9.1 bits;  conditional E-value: 0.0015
    PF13414.1  19 ydeAieayekAleldp 34 
                  y+ A+++y++Al+ld+
  MMETSP1325-20131115|10380_1 215 YESALKHYKEALRLDS 230
                  6777777777777775 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.8   3.6e-05     0.021      15      34 .]       5      24 ..       2      24 .. 0.87
   2 ?   -0.1   0.0       1.2   7.1e+02       2      10 ..      26      34 ..      25      34 .. 0.84
   3 ?    6.0   0.0     0.014       8.6      19      34 .]      66      81 ..      60      81 .. 0.88
   4 !   31.4   0.0   1.3e-10     8e-08       2      34 .]      83     115 ..      82     115 .. 0.97
   5 !   26.5   0.0   4.8e-09   2.8e-06       3      33 ..     118     148 ..     117     149 .. 0.92
   6 !   18.7   0.0   1.4e-06   0.00083       3      34 .]     152     183 ..     150     183 .. 0.94
   7 !   10.0   0.0    0.0008      0.48       1      15 [.     184     198 ..     184     199 .. 0.91
   8 !   12.8   0.0    0.0001     0.059      17      32 ..     215     230 ..     215     232 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.6e-05
                 T-HHHHHHHHHHHHHHHTTH CS
   PF00515.23 15 gkydeAleyyekALelnPnn 34
                  ++++A+++ye+A+  n +n
  MMETSP1325-20131115|10380_1  5 HDFEKAIKHYEQAILYNKKN 24
                 69************988765 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 1.2
                 HHHHHHHHH CS
   PF00515.23  2 kalynlGna 10
                 + +ynl+na
  MMETSP1325-20131115|10380_1 26 EYFYNLANA 34
                 679****97 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.014
                 HHHHHHHHHHHHHTTH CS
   PF00515.23 19 eAleyyekALelnPnn 34
                  A + y ++++l+Pn+
  MMETSP1325-20131115|10380_1 66 RAQKMYMEVIKLDPNH 81
                 68899*********97 PP

  == domain 4    score: 31.4 bits;  conditional E-value: 1.3e-10
                  HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
   PF00515.23   2 kalynlGnaylklgkydeAleyyekALelnPnn 34 
                   a+ynlG+++ +l+ +d A+  +++AL+l+Pn+
  MMETSP1325-20131115|10380_1  83 AAWYNLGYVQEELQLFDSAIRSFSEALKLEPND 115
                  59*****************************97 PP

  == domain 5    score: 26.5 bits;  conditional E-value: 4.8e-09
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHHHTT CS
   PF00515.23   3 alynlGnaylklgkydeAleyyekALelnPn 33 
                  a  nlGn+y++ +k+de +  y+kA+el+ +
  MMETSP1325-20131115|10380_1 118 AIINLGNTYMNSEKFDESIIQYKKAIELDST 148
                  667**************************87 PP

  == domain 6    score: 18.7 bits;  conditional E-value: 1.4e-06
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
   PF00515.23   3 alynlGnaylklgkydeAleyyekALelnPnn 34 
                  ++ynl+ ay++  + + A +y++ A+ l  ++
  MMETSP1325-20131115|10380_1 152 SHYNLASAYHSILDIKSAMKYFKSAIALKSDY 183
                  69**************************9876 PP

  == domain 7    score: 10.0 bits;  conditional E-value: 0.0008
                  HHHHHHHHHHHHHTT CS
   PF00515.23   1 akalynlGnaylklg 15 
                  a+a++nlG +y+  g
  MMETSP1325-20131115|10380_1 184 ADAHFNLGICYQDEG 198
                  89*********9876 PP

  == domain 8    score: 12.8 bits;  conditional E-value: 0.0001
                  HHHHHHHHHHHHHHHT CS
   PF00515.23  17 ydeAleyyekALelnP 32 
                  y+ Al++y++AL+l+ 
  MMETSP1325-20131115|10380_1 215 YESALKHYKEALRLDS 230
                  999***********95 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.6   2.5e-05     0.015      14      34 .]       4      24 ..       2      24 .. 0.89
   2 ?   -1.1   0.0       3.5   2.1e+03       1      10 [.      25      34 ..      25      37 .. 0.86
   3 ?    4.6   0.0     0.053        32      19      34 .]      66      81 ..      59      81 .. 0.89
   4 !   27.4   0.1   2.7e-09   1.6e-06       2      34 .]      83     115 ..      82     115 .. 0.96
   5 !   23.5   0.0   4.9e-08   2.9e-05       3      33 ..     118     148 ..     117     149 .. 0.92
   6 !   10.9   0.0    0.0005       0.3       3      32 ..     152     181 ..     150     183 .. 0.92
   7 ?    5.9   0.0      0.02        12       1      15 [.     184     198 ..     184     200 .. 0.89
   8 !   12.5   0.0   0.00016     0.094      17      31 ..     215     229 ..     211     231 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.5e-05
                 TT-HHHHHHHHHHHHHH-TTS CS
   PF07719.12 14 lgdyeeAleafekAleldPnn 34
                 + d+e+A++++e+A+ ++ +n
  MMETSP1325-20131115|10380_1  4 AHDFEKAIKHYEQAILYNKKN 24
                 679************999876 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 3.5
                 HHHHHHHHHH CS
   PF07719.12  1 aealynlGla 10
                 +e+ ynl++a
  MMETSP1325-20131115|10380_1 25 PEYFYNLANA 34
                 6899***997 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.053
                 HHHHHHHHHHHH-TTS CS
   PF07719.12 19 eAleafekAleldPnn 34
                 +A + + ++++ldPn+
  MMETSP1325-20131115|10380_1 66 RAQKMYMEVIKLDPNH 81
                 79999*********97 PP

  == domain 4    score: 27.4 bits;  conditional E-value: 2.7e-09
                  HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
   PF07719.12   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                   a+ynlG++ ++l+ ++ A++ f +Al+l+Pn+
  MMETSP1325-20131115|10380_1  83 AAWYNLGYVQEELQLFDSAIRSFSEALKLEPND 115
                  69*****************************97 PP

  == domain 5    score: 23.5 bits;  conditional E-value: 4.9e-08
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
   PF07719.12   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                  a  nlG+ y+++ +++e +  ++kA+eld +
  MMETSP1325-20131115|10380_1 118 AIINLGNTYMNSEKFDESIIQYKKAIELDST 148
                  5689************************976 PP

  == domain 6    score: 10.9 bits;  conditional E-value: 0.0005
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
   PF07719.12   3 alynlGlayyklgdyeeAleafekAleldP 32 
                   +ynl+ ay    d + A ++f+ A++l  
  MMETSP1325-20131115|10380_1 152 SHYNLASAYHSILDIKSAMKYFKSAIALKS 181
                  59************************9975 PP

  == domain 7    score: 5.9 bits;  conditional E-value: 0.02
                  HHHHHHHHHHHHHTT CS
   PF07719.12   1 aealynlGlayyklg 15 
                  a+a++nlG +y   g
  MMETSP1325-20131115|10380_1 184 ADAHFNLGICYQDEG 198
                  79*********9876 PP

  == domain 8    score: 12.5 bits;  conditional E-value: 0.00016
                  HHHHHHHHHHHHHH- CS
   PF07719.12  17 yeeAleafekAleld 31 
                  ye Al+++++Al+ld
  MMETSP1325-20131115|10380_1 215 YESALKHYKEALRLD 229
                  9*************9 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.3   1.1e-05    0.0065       1      24 [.      13      36 ..      13      55 .. 0.81
   2 !   20.4   0.0   5.8e-07   0.00034       1      27 [.      70      96 ..      70     103 .. 0.85
   3 !   19.1   0.0   1.5e-06   0.00089       2      33 ..     105     136 ..     104     137 .. 0.92
   4 !   14.3   0.0   5.1e-05      0.03       2      25 ..     139     162 ..     138     170 .. 0.91
   5 !   16.9   0.0   7.7e-06    0.0046       2      27 ..     173     198 ..     172     209 .. 0.87
   6 ?   -1.6   0.0       6.6   3.9e+03       1       9 [.     221     229 ..     214     230 .. 0.66

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.1e-05
    PF13431.1  1 lyekaleldPnnadaynnLAelll 24
                 +ye+a+ ++++n++ ++nLA++ +
  MMETSP1325-20131115|10380_1 13 HYEQAILYNKKNPEYFYNLANAIQ 36
                 6*******************9876 PP

  == domain 2    score: 20.4 bits;  conditional E-value: 5.8e-07
    PF13431.1  1 lyekaleldPnnadaynnLAelllnnG 27
                 +y + ++ldPn++ a++nL+++  +++
  MMETSP1325-20131115|10380_1 70 MYMEVIKLDPNHHAAWYNLGYVQEELQ 96
                 799******************987765 PP

  == domain 3    score: 19.1 bits;  conditional E-value: 1.5e-06
    PF13431.1   2 yekaleldPnnadaynnLAelllnnGdleeAe 33 
                  + +al+l+Pn+ da  nL++++ n  +++e++
  MMETSP1325-20131115|10380_1 105 FSEALKLEPNDKDAIINLGNTYMNSEKFDESI 136
                  579**********************9999875 PP

  == domain 4    score: 14.3 bits;  conditional E-value: 5.1e-05
    PF13431.1   2 yekaleldPnnadaynnLAellln 25 
                  y+ka+eld + +++++nLA ++++
  MMETSP1325-20131115|10380_1 139 YKKAIELDSTCVMSHYNLASAYHS 162
                  9*********************86 PP

  == domain 5    score: 16.9 bits;  conditional E-value: 7.7e-06
    PF13431.1   2 yekaleldPnnadaynnLAelllnnG 27 
                  ++ a++l  ++ada++nL+ ++++ G
  MMETSP1325-20131115|10380_1 173 FKSAIALKSDYADAHFNLGICYQDEG 198
                  788*******************9766 PP

  == domain 6    score: -1.6 bits;  conditional E-value: 6.6
    PF13431.1   1 lyekaleld 9  
                  +y++al+ld
  MMETSP1325-20131115|10380_1 221 HYKEALRLD 229
                  467777665 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.3    0.0005       0.3      16      33 ..       6      24 ..       2      25 .. 0.88
   2 ?    5.4   0.0     0.026        16      20      34 .]      67      81 ..      50      81 .. 0.77
   3 !   21.7   0.0   1.7e-07    0.0001       2      33 ..      83     115 ..      82     116 .. 0.93
   4 !   19.9   0.1   6.3e-07   0.00037       3      32 ..     118     147 ..     116     149 .. 0.92
   5 !   13.9   0.7   5.1e-05      0.03       4      33 ..     153     182 ..     152     183 .. 0.93
   6 ?    3.5   0.0      0.11        64       2      15 ..     185     198 ..     184     200 .. 0.88
   7 !    9.3   0.1    0.0015      0.87      15      31 ..     213     229 ..     211     230 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.0005
                 -HHHHHHHHH---HHHH.. CS
    PF13181.1 16 dydkAkeylekalelkp.r 33
                 d++kA++++e+a+ +++ +
  MMETSP1325-20131115|10380_1  6 DFEKAIKHYEQAILYNKkN 24
                 89***********999844 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.026
                 HHHHHH---HHHH.H CS
    PF13181.1 20 Akeylekalelkprn 34
                 A + ++++++l+p++
  MMETSP1325-20131115|10380_1 67 AQKMYMEVIKLDPNH 81
                 9999*********85 PP

  == domain 3    score: 21.7 bits;  conditional E-value: 1.7e-07
                  --TTT---HHHHTT-HHHHHHHHH---HHHH.. CS
    PF13181.1   2 kayynlGdiYrqlGdydkAkeylekalelkp.r 33 
                  +a+ynlG++ ++l  +d+A+ ++ +al+l p +
  MMETSP1325-20131115|10380_1  83 AAWYNLGYVQEELQLFDSAIRSFSEALKLEPnD 115
                  69****************************955 PP

  == domain 4    score: 19.9 bits;  conditional E-value: 6.3e-07
                  -TTT---HHHHTT-HHHHHHHHH---HHHH CS
    PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkp 32 
                  a +nlG +Y++  ++d+++  ++ka+el+ 
  MMETSP1325-20131115|10380_1 118 AIINLGNTYMNSEKFDESIIQYKKAIELDS 147
                  679*************************85 PP

  == domain 5    score: 13.9 bits;  conditional E-value: 5.1e-05
                  TTT---HHHHTT-HHHHHHHHH---HHHH. CS
    PF13181.1   4 yynlGdiYrqlGdydkAkeylekalelkpr 33 
                  +ynl+++Y +  d+++A++y++ a+ lk +
  MMETSP1325-20131115|10380_1 153 HYNLASAYHSILDIKSAMKYFKSAIALKSD 182
                  8************************99976 PP

  == domain 6    score: 3.5 bits;  conditional E-value: 0.11
                  --TTT---HHHHTT CS
    PF13181.1   2 kayynlGdiYrqlG 15 
                   a++nlG +Y + G
  MMETSP1325-20131115|10380_1 185 DAHFNLGICYQDEG 198
                  799*******9987 PP

  == domain 7    score: 9.3 bits;  conditional E-value: 0.0015
                  T-HHHHHHHHH---HHH CS
    PF13181.1  15 GdydkAkeylekalelk 31 
                    y++A++++++al l+
  MMETSP1325-20131115|10380_1 213 EFYESALKHYKEALRLD 229
                  569***********997 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   1.6e-05    0.0098       9      41 ..       3      35 ..       2      57 .. 0.87
   2 !   13.1   0.0   0.00018       0.1      13      51 ..      64     102 ..      51     102 .. 0.89
   3 !   23.8   0.0   7.7e-08   4.6e-05      13      61 ..      98     146 ..      93     148 .. 0.94
   4 !   11.1   0.0   0.00077      0.46      12      45 ..     165     198 ..     154     205 .. 0.85
   5 ?    4.3   0.0       0.1        61      13      33 ..     215     238 ..     212     244 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.6e-05
    PF13432.1  9 raGdydeAlaaleaalalaPeaaeallllaeal 41
                 +a d+++A++++e+a+ ++ +++e++++la a 
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQAILYNKKNPEYFYNLANAI 35
                 5789**************************986 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 0.00018
    PF13432.1  13 ydeAlaaleaalalaPeaaeallllaeallrlgrldeAa 51 
                  + +A++ + ++++l+P +  a+++l+ +  +l  +d A+
  MMETSP1325-20131115|10380_1  64 LTRAQKMYMEVIKLDPNHHAAWYNLGYVQEELQLFDSAI 102
                  6789999999*******************9999999885 PP

  == domain 3    score: 23.8 bits;  conditional E-value: 7.7e-08
    PF13432.1  13 ydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalala 61 
                  +d A++ +++al+l+P + +a  +l+ +++   ++de+++ +++a++l+
  MMETSP1325-20131115|10380_1  98 FDSAIRSFSEALKLEPNDKDAIINLGNTYMNSEKFDESIIQYKKAIELD 146
                  899*****************************************99887 PP

  == domain 4    score: 11.1 bits;  conditional E-value: 0.00077
    PF13432.1  12 dydeAlaaleaalalaPeaaeallllaeallrlg 45 
                  d + A ++++ a+al  ++a+a+++l+ ++ + g
  MMETSP1325-20131115|10380_1 165 DIKSAMKYFKSAIALKSDYADAHFNLGICYQDEG 198
                  6778999**********************98776 PP

  == domain 5    score: 4.3 bits;  conditional E-value: 0.1
    PF13432.1  13 ydeAlaaleaalala...Peaaea 33 
                  y+ Al+++++al+l+    ea ea
  MMETSP1325-20131115|10380_1 215 YESALKHYKEALRLDsgmEEASEA 238
                  8999999*9999999666556666 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00076      0.45      13      42 ..       3      32 ..       1      34 [. 0.91
   2 !   12.3   0.0   0.00031      0.19      15      43 ..      62      90 ..      46      91 .. 0.83
   3 !   23.3   0.0   9.4e-08   5.6e-05       2      42 ..      83     123 ..      82     125 .. 0.96
   4 ?    6.5   0.0     0.024        14       4      31 ..     119     146 ..     117     157 .. 0.86
   5 !    8.9   0.0     0.004       2.4       5      42 ..     154     191 ..     150     193 .. 0.92
   6 ?    3.3   0.0      0.26   1.5e+02      17      32 ..     215     230 ..     210     244 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00076
    PF13428.1 13 alGdpdeAiallrralalaPddaealllLa 42
                 +++d+++Ai+++++a+  + +++e+ ++La
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQAILYNKKNPEYFYNLA 32
                 689**************9******999998 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.00031
    PF13428.1 15 GdpdeAiallrralalaPddaealllLar 43
                 + + +A +++ ++++l+P++ +a+++L++
  MMETSP1325-20131115|10380_1 62 EALTRAQKMYMEVIKLDPNHHAAWYNLGY 90
                 45789*********************996 PP

  == domain 3    score: 23.3 bits;  conditional E-value: 9.4e-08
    PF13428.1   2 eallalarallalGdpdeAiallrralalaPddaealllLa 42 
                  +a++ l+ ++++l+ +d Ai+ + +al+l P+d +a ++L+
  MMETSP1325-20131115|10380_1  83 AAWYNLGYVQEELQLFDSAIRSFSEALKLEPNDKDAIINLG 123
                  79**********************************99997 PP

  == domain 4    score: 6.5 bits;  conditional E-value: 0.024
    PF13428.1   4 llalarallalGdpdeAiallrralala 31 
                     l++ +++++ +de i ++++a++l+
  MMETSP1325-20131115|10380_1 119 IINLGNTYMNSEKFDESIIQYKKAIELD 146
                  56799********************987 PP

  == domain 5    score: 8.9 bits;  conditional E-value: 0.004
    PF13428.1   5 lalarallalGdpdeAiallrralalaPddaealllLa 42 
                  + la a+    d + A+++++ a+al  d a+a+++L+
  MMETSP1325-20131115|10380_1 154 YNLASAYHSILDIKSAMKYFKSAIALKSDYADAHFNLG 191
                  779999999999**********************9997 PP

  == domain 6    score: 3.3 bits;  conditional E-value: 0.26
    PF13428.1  17 pdeAiallrralalaP 32 
                  ++ A++++++al+l+ 
  MMETSP1325-20131115|10380_1 215 YESALKHYKEALRLDS 230
                  7899999999999875 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.3    0.0018       1.1      17      49 ..       3      35 ..       1      44 [. 0.73
   2 !   19.4   0.2   1.1e-06   0.00067      21      76 ..      60     112 ..      49     114 .. 0.73
   3 !   32.2   0.1   1.1e-10   6.6e-08       6      76 ..      83     146 ..      78     148 .. 0.90
   4 !   20.3   2.4     6e-07   0.00035       6      76 ..     151     229 ..     146     231 .. 0.86
   5 !    6.8   0.2    0.0093       5.5      20      35 ..     214     229 ..     207     244 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0018
    PF13424.1 17 rlgdydeAlelyekalellrelgddhpdtaral 49
                 + +d+++A+++ye+a+   ++ ++  +++a+a 
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQAILYNKKNPEYFYNLANAI 35
                 578999999999999877666666666666665 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 1.1e-06
    PF13424.1  21 ydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                   +eAl    +a +++ e+   +p+   a++nl++++++l+ +d+A++ + +Al++ 
  MMETSP1325-20131115|10380_1  60 EEEAL---TRAQKMYMEVIKLDPNHHAAWYNLGYVQEELQLFDSAIRSFSEALKLE 112
                  44444...55666644444444555679*************************985 PP

  == domain 3    score: 32.2 bits;  conditional E-value: 1.1e-10
    PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleia 76 
                  ++++nl+ v ++l+ +d+A+  + +al+l     +++    +a  nl+n+y+  +++de++  ++kA+e++
  MMETSP1325-20131115|10380_1  83 AAWYNLGYVQEELQLFDSAIRSFSEALKLE----PNDK---DAIINLGNTYMNSEKFDESIIQYKKAIELD 146
                  7899***********************996....4554...589*************************97 PP

  == domain 4    score: 20.3 bits;  conditional E-value: 6e-07
    PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgd........ydeAleylekAleia 76 
                  ++++nla +++   d ++A ++++ a++l + + d+h ++  ++ + +  + + g+        y++Al+++++Al+++
  MMETSP1325-20131115|10380_1 151 MSHYNLASAYHSILDIKSAMKYFKSAIALKSDYADAHFNLGICYQDEGAKLKETGKdkktmlefYESALKHYKEALRLD 229
                  789**************************99999999999999999999999999867777777788888888888875 PP

  == domain 5    score: 6.8 bits;  conditional E-value: 0.0093
    PF13424.1  20 dydeAlelyekalell 35 
                   y++Al++y++al l 
  MMETSP1325-20131115|10380_1 214 FYESALKHYKEALRLD 229
                  5666666666666554 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0    0.0008      0.48      14      30 ..       6      20 ..       4      26 .. 0.82
   2 !   11.8   0.0   0.00025      0.15       1      35 [.      84     116 ..      84     117 .. 0.89
   3 !   15.6   0.0   1.5e-05    0.0087       1      29 [.     118     146 ..     118     148 .. 0.89
   4 !    9.6   0.0    0.0012      0.72       1      31 [.     152     182 ..     152     186 .. 0.90
   5 ?   -0.5   0.0       2.2   1.3e+03       1      13 [.     186     198 ..     186     199 .. 0.87
   6 ?    6.0   0.1     0.018        11      15      33 ..     215     233 ..     215     236 .. 0.82
   7 ?    0.7   0.0      0.85   5.1e+02      16      29 ..     236     247 ..     231     249 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.0008
    PF13176.1 14 dyekAielyeraLaltk 30
                 d+ekAi++ye+  a+ +
  MMETSP1325-20131115|10380_1  6 DFEKAIKHYEQ--AILY 20
                 8**********..7765 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00025
    PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkdplda 35 
                  a++nL+ ++++l+ ++ Ai+ + +  al+ +p+d+
  MMETSP1325-20131115|10380_1  84 AWYNLGYVQEELQLFDSAIRSFSE--ALKLEPNDK 116
                  79**********************..777777765 PP

  == domain 3    score: 15.6 bits;  conditional E-value: 1.5e-05
    PF13176.1   1 allnLarlysrlgdyekAielyeraLalt 29 
                  a+ nL+++y+++ ++++ i  y++a++l+
  MMETSP1325-20131115|10380_1 118 AIINLGNTYMNSEKFDESIIQYKKAIELD 146
                  678*********************77776 PP

  == domain 4    score: 9.6 bits;  conditional E-value: 0.0012
    PF13176.1   1 allnLarlysrlgdyekAielyeraLaltkd 31 
                  +++nLa++y +  d + A ++++ a+al++d
  MMETSP1325-20131115|10380_1 152 SHYNLASAYHSILDIKSAMKYFKSAIALKSD 182
                  579*********************9999887 PP

  == domain 5    score: -0.5 bits;  conditional E-value: 2.2
    PF13176.1   1 allnLarlysrlg 13 
                  a++nL+ +y++ g
  MMETSP1325-20131115|10380_1 186 AHFNLGICYQDEG 198
                  679******9987 PP

  == domain 6    score: 6.0 bits;  conditional E-value: 0.018
    PF13176.1  15 yekAielyeraLaltkdpl 33 
                  ye A+++y++aL+l++  +
  MMETSP1325-20131115|10380_1 215 YESALKHYKEALRLDSGME 233
                  899*******998887665 PP

  == domain 7    score: 0.7 bits;  conditional E-value: 0.85
    PF13176.1  16 ekAielyeraLalt 29 
                  ++Aiel+++  ++ 
  MMETSP1325-20131115|10380_1 236 SEAIELLTE--EMS 247
                  79*****99..775 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.33   1.9e+02      15      27 ..       6      18 ..       2      21 .. 0.87
   2 ?    3.7   0.0      0.16        93      16      33 .]      64      81 ..      28      81 .. 0.82
   3 !   13.5   0.0   0.00012     0.069       2      32 ..      84     114 ..      83     115 .. 0.93
   4 ?    0.7   0.0       1.3   7.9e+02       2      28 ..     118     144 ..     117     147 .. 0.82
   5 !    8.0   0.0    0.0065       3.9       3      27 ..     153     177 ..     151     179 .. 0.91
   6 !    7.8   0.1    0.0072       4.3       1      30 [.     185     222 ..     185     244 .. 0.90

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHHH CS
    PF13174.1 15 dtdeAlealerli 27
                 d+++A++ +e+ i
  MMETSP1325-20131115|10380_1  6 DFEKAIKHYEQAI 18
                 789*******987 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHH-TT- CS
    PF13174.1 16 tdeAlealerlikeyPdS 33
                  ++A +++ ++ik  P++
  MMETSP1325-20131115|10380_1 64 LTRAQKMYMEVIKLDPNH 81
                 458999*******99996 PP

  == domain 3    score: 13.5 bits;  conditional E-value: 0.00012
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
    PF13174.1   2 AlyklalsyyklgdtdeAlealerlikeyPd 32 
                  A+y+l++++++l+ +d A++ + + +k  P+
  MMETSP1325-20131115|10380_1  84 AWYNLGYVQEELQLFDSAIRSFSEALKLEPN 114
                  99*********77**************9998 PP

  == domain 4    score: 0.7 bits;  conditional E-value: 1.3
                  HHHHHHHHHHH.HHHHHHHHHHHHHHHH CS
    PF13174.1   2 Alyklalsyyk.lgdtdeAlealerlik 28 
                  A  +l+  y +   ++de++  +++ i+
  MMETSP1325-20131115|10380_1 118 AIINLGNTYMNsE-KFDESIIQYKKAIE 144
                  6678999999956.99999999999987 PP

  == domain 5    score: 8.0 bits;  conditional E-value: 0.0065
                  HHHHHHHHHH.HHHHHHHHHHHHHHH CS
    PF13174.1   3 lyklalsyyk.lgdtdeAlealerli 27 
                   y+la +y   l d   A+++++  i
  MMETSP1325-20131115|10380_1 153 HYNLASAYHSiL-DIKSAMKYFKSAI 177
                  7***********.*********9987 PP

  == domain 6    score: 7.8 bits;  conditional E-value: 0.0072
                  HHHHHHHHHHHH.H.......HHHHHHHHHHHHHHHH- CS
    PF13174.1   1 dAlyklalsyyk.l.......gdtdeAlealerlikey 30 
                  dA ++l+ +y+  +       +d+   le +e  +k y
  MMETSP1325-20131115|10380_1 185 DAHFNLGICYQDeGaklketgKDKKTMLEFYESALKHY 222
                  79*********856999999779999999999988876 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0         1   5.9e+02       7      29 ..       3      25 ..       1      44 [. 0.73
   2 !   23.3   0.0   6.6e-08   3.9e-05       7      65 ..      60     118 ..      55     120 .. 0.94
   3 ?    2.2   0.0      0.24   1.4e+02       3      66 ..     124     187 ..     122     188 .. 0.88
   4 ?    4.1   0.0     0.064        38      10      41 ..     165     196 ..     156     202 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 1
    PF13371.1  7 reedferALavverllllaPddp 29
                 +++dfe+A++ +e  +l +   p
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQAILYNKKNP 25
                 56778888887777777665555 PP

  == domain 2    score: 23.3 bits;  conditional E-value: 6.6e-08
    PF13371.1   7 reedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapda 65 
                  +ee   rA +++  ++ l+P+++  ++  G+++++l+ +  A++ ++ +l+l+p++ da
  MMETSP1325-20131115|10380_1  60 EEEALTRAQKMYMEVIKLDPNHHAAWYNLGYVQEELQLFDSAIRSFSEALKLEPNDKDA 118
                  688889999999999*****************************************998 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.24
    PF13371.1   3 aiylreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcpdapdae 66 
                  ++y+++e+f++ +  +   ++l++  +  ++  + +++   +   A++ +  +++l  d  da+
  MMETSP1325-20131115|10380_1 124 NTYMNSEKFDESIIQYKKAIELDSTCVMSHYNLASAYHSILDIKSAMKYFKSAIALKSDYADAH 187
                  7899999999999999999999999999999999999999999999999999998888777765 PP

  == domain 4    score: 4.1 bits;  conditional E-value: 0.064
    PF13371.1  10 dferALavverllllaPddpyerRDrGlllaq 41 
                  d  +A+++  + ++l++d +  +   G++++ 
  MMETSP1325-20131115|10380_1 165 DIKSAMKYFKSAIALKSDYADAHFNLGICYQD 196
                  67899*************************86 PP

>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.055        33      23      34 ..       6      17 ..       2      19 .. 0.87
   2 ?    1.8   0.0      0.61   3.6e+02       3      11 ..      84      90 ..      83     110 .. 0.84
   3 ?    0.6   0.0       1.5   8.8e+02       2      29 ..     117     144 ..     116     146 .. 0.51
   4 ?    3.9   0.0      0.14        81       4      35 ..     153     177 ..     150     181 .. 0.78
   5 !   12.0   0.0   0.00039      0.23       1      34 [.     184     225 ..     184     230 .. 0.71

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.055
    PF08238.7 23 dpekAleWyekA 34
                 d ekA+++ye+A
  MMETSP1325-20131115|10380_1  6 DFEKAIKHYEQA 17
                 899********9 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.61
    PF08238.7  3 AqynLGlyy 11
                 A ynLG  y
  MMETSP1325-20131115|10380_1 84 AWYNLG--Y 90
                 99****..5 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 1.5
    PF08238.7   2 eAqynLG.lyymylnGl..gGvpk.dpekAle 29 
                  +A  nLG +y   +n +  + +    ++kA+e
  MMETSP1325-20131115|10380_1 117 DAIINLGnTY---MNSEkfD-ESIiQYKKAIE 144
                  6888999554...3665221.11112555554 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.14
    PF08238.7   4 qynLGlyymylnGlgGvpkdpekAleWyekAA 35 
                   ynL+  y   + +  +  d + A+++++ A 
  MMETSP1325-20131115|10380_1 153 HYNLASAY---HSI--L--DIKSAMKYFKSAI 177
                  69999667...777..6..8889*****9886 PP

  == domain 5    score: 12.0 bits;  conditional E-value: 0.00039
    PF08238.7   1 aeAqynLG.lyymylnGl.....gGvpkd.......pekAleWyekA 34 
                  a+A +nLG +y+  ++G      g   kd       +e Al++y+ A
  MMETSP1325-20131115|10380_1 184 ADAHFNLGiCYQ--DEGAklketG---KDkktmlefYESALKHYKEA 225
                  79*******999..***9775433...35334556777777777777 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.6    0.0062       3.7       2      41 ..       4      41 ..       3      54 .. 0.84
   2 !   13.6   0.1     8e-05     0.048       4      81 ..      59     139 ..      56     141 .. 0.84
   3 !   16.0   0.3   1.5e-05    0.0089       3      81 ..      96     173 ..      94     176 .. 0.87
   4 ?    3.3   0.1      0.13        79       4      39 ..     165     198 ..     162     202 .. 0.74
   5 ?   -0.5   0.0       2.1   1.2e+03      70      79 ..     218     227 ..     212     231 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0062
                 TT-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---H CS
    PF12895.2  2 qhnyknAlflaekllaespkdpedaylyalAlclylngey 41
                  h++++A++++e+++  ++k  + +y y+lA++ +++ + 
  MMETSP1325-20131115|10380_1  4 AHDFEKAIKHYEQAILYNKK--NPEYFYNLANAIQEAMNL 41
                 6899**********999874..67899999*998877665 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 8e-05
                  -HHHHHHHHHHHCCC-ST.-H.HHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHH.HHHHHHTT-HHHHCCCH CS
    PF12895.2   4 nyknAlflaekllaespk.dp.edaylyalAlclylngeykrAyellrk.leldssslgcryll.ArcllklgkydeAiavL 81 
                  + ++Al  a+k++ e  k dp ++a++y+l+++  +++ +++A+  +++ l+l+++  + +++  + ++   +k+de i  +
  MMETSP1325-20131115|10380_1  59 REEEALTRAQKMYMEVIKlDPnHHAAWYNLGYVQEELQLFDSAIRSFSEaLKLEPND-KDAIINlGNTYMNSEKFDESIIQY 139
                  568899999999999988866799********************9999999999887.666666599999999999988655 PP

  == domain 3    score: 16.0 bits;  conditional E-value: 1.5e-05
                  T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC.TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCH CS
    PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk.leldssslgcryllArcllklgkydeAiavL 81 
                  + +++A+  + ++l+++p + +++++ +l++++++++++++ +  ++k  elds+ + ++y lA +++   + + A + +
  MMETSP1325-20131115|10380_1  96 QLFDSAIRSFSEALKLEP-N-DKDAIINLGNTYMNSEKFDESIIQYKKaIELDSTCVMSHYNLASAYHSILDIKSAMKYF 173
                  56899***********99.4.78899999*************9999999*****99*****9999998887777777666 PP

  == domain 4    score: 3.3 bits;  conditional E-value: 0.13
                  -HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH-- CS
    PF12895.2   4 nyknAlflaekllaespkdpedaylyalAlclylng 39 
                  ++k+A++++  ++a+ + d  +++ ++l+ c++  g
  MMETSP1325-20131115|10380_1 165 DIKSAMKYFKSAIALKS-D-YADAHFNLGICYQDEG 198
                  57899999999999986.4.3334455699998765 PP

  == domain 5    score: -0.5 bits;  conditional E-value: 2.1
                  HTT-HHHHCC CS
    PF12895.2  70 klgkydeAia 79 
                  +l+ y+eA++
  MMETSP1325-20131115|10380_1 218 ALKHYKEALR 227
                  4666777664 PP

>> PF06552.7  Plant specific mitochondrial import receptor subunit TOM20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.4     0.015       8.9      94     133 ..       5      45 ..       1      72 [. 0.70
   2 ?   -1.8   0.0       2.9   1.7e+03      57      76 ..      70      89 ..      60      92 .. 0.70
   3 !   16.5   0.0   7.5e-06    0.0044      44      88 ..      91     135 ..      85     162 .. 0.81
   4 ?    0.8   0.1      0.46   2.7e+02      51     121 ..     166     240 ..     155     246 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.015
                  HHHHHHHHHHHHHHHH-TT-HHHHHHHHHH.HTHHHHHHHH CS
    PF06552.7  94 enfdkatqffqqavdedPdndlyrkslela.akaPelhtel 133
                  + f+ka ++++qa+  + +n  y + l  a ++a +lht  
  MMETSP1325-20131115|10380_1   5 HDFEKAIKHYEQAILYNKKNPEYFYNLANAiQEAMNLHTGE 45 
                  57888888888888888888888888876624577788743 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 2.9
                 HHHHHHHH-TT-HHHHHH-- CS
    PF06552.7 57 kleealvidPkkhdalWcig 76
                  + e + +dP++h a + +g
  MMETSP1325-20131115|10380_1 70 MYMEVIKLDPNHHAAWYNLG 89
                 45678888999888776665 PP

  == domain 3    score: 16.5 bits;  conditional E-value: 7.5e-06
                  HHHHHHHHHHHHHHHHHHHHH-TT-HHHHHH---HHHHHHHH--- CS
    PF06552.7  44 vaeakkmindaiskleealvidPkkhdalWcignaytsfafltpd 88 
                  v+e  ++ + ai  + eal ++P+ +da+  +gn+y+    + + 
  MMETSP1325-20131115|10380_1  91 VQEELQLFDSAIRSFSEALKLEPNDKDAIINLGNTYMNSEKFDES 135
                  78999*******************************976655544 PP

  == domain 4    score: 0.8 bits;  conditional E-value: 0.46
                  HHHHHHHHHHHHHH-TT-HHHHHH---HHHHHHH.H...---HHHHHHHHHHHHHHHHHHHHH-TT-HHHHHHHH CS
    PF06552.7  51 indaiskleealvidPkkhdalWcignaytsfaf.l...tpdeeeakenfdkatqffqqavdedPdndlyrksle 121
                  i+ a+  ++ a+ +     da + +g  y   +  l    +d++   e ++ a +++++a   d + +    ++e
  MMETSP1325-20131115|10380_1 166 IKSAMKYFKSAIALKSDYADAHFNLGICYQDEGAkLketGKDKKTMLEFYESALKHYKEALRLDSGMEEASEAIE 240
                  566777777888888888888888888777554312111345555556677777777777776666665555555 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.3     0.012       7.2      17      33 ..       3      19 ..       2      23 .. 0.89
   2 ?    0.7   0.1      0.73   4.3e+02      15      44 ..      54      80 ..      48      84 .. 0.71
   3 !    6.8   0.0     0.009       5.4      25      47 ..      95     117 ..      87     128 .. 0.87
   4 ?    5.4   0.0     0.025        15       4      33 ..     100     144 ..      98     145 .. 0.62
   5 ?   -1.5   0.0       3.5   2.1e+03      30      41 ..     168     179 ..     163     188 .. 0.60
   6 !    8.6   0.2    0.0026       1.5      25      44 ..     212     231 ..     194     248 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.012
                 HTT-HHHHHHHHHHHHH CS
   PF04212.13 17 eagkyeeAlelYkeAle 33
                 ea+++e+A+++Y++A+ 
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQAIL 19
                 6889***********95 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.73
                 HHHTT-HHHHHHHHHHHHHHHHHHHHHCTT CS
   PF04212.13 15 aDeagkyeeAlelYkeAlelLlqalkyepn 44
                 a+++++ eeAl   + A++ +++++k +pn
  MMETSP1325-20131115|10380_1 54 AEHSKREEEAL---TRAQKMYMEVIKLDPN 80
                 55566666666...5678888888888876 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.009
                  HHHHHHHHHHHHHHHHHCTTHHC CS
   PF04212.13  25 lelYkeAlelLlqalkyepnper 47 
                  l+l  +A+  + +alk epn+++
  MMETSP1325-20131115|10380_1  95 LQLFDSAIRSFSEALKLEPNDKD 117
                  78999*************99986 PP

  == domain 4    score: 5.4 bits;  conditional E-value: 0.025
                  HHHHHHHHHHHHHHTT...............-HHHHHHHHHHHHH CS
   PF04212.13   4 kAlelikkAveaDeag...............kyeeAlelYkeAle 33 
                  +A+ ++++A++ + +                k++e +  Yk+A+e
  MMETSP1325-20131115|10380_1 100 SAIRSFSEALKLEPNDkdaiinlgntymnseKFDESIIQYKKAIE 144
                  566666666666665555666666666666677777777777776 PP

  == domain 5    score: -1.5 bits;  conditional E-value: 3.5
                  HHHHHHHHHHHH CS
   PF04212.13  30 eAlelLlqalky 41 
                  +A +++  a++ 
  MMETSP1325-20131115|10380_1 168 SAMKYFKSAIAL 179
                  455555555554 PP

  == domain 6    score: 8.6 bits;  conditional E-value: 0.0026
                  HHHHHHHHHHHHHHHHHCTT CS
   PF04212.13  25 lelYkeAlelLlqalkyepn 44 
                  le Y++Al+++ +al  +++
  MMETSP1325-20131115|10380_1 212 LEFYESALKHYKEALRLDSG 231
                  66666666666666666644 PP

>> PF02259.18  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   3.0    0.0013      0.75     265     305 ..      51      95 ..       2     101 .. 0.74
   2 !   10.6   0.5   0.00032      0.19     269     340 ..     127     231 ..     104     243 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0013
   PF02259.18 265 l...k.snweqekkdeilkaystatefdpqwykawhswalanfev 305
                  +   + s++e+e    ++k+y++++++dp++  aw+++++ ++e+
  MMETSP1325-20131115|10380_1  51 MaeaEhSKREEEALTRAQKMYMEVIKLDPNHHAAWYNLGYVQEEL 95 
                  14445466999****************************998875 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00032
   PF02259.18 269 weqekkdeilkaystatefdpqwykawhswalanfevvqaeesekk.................................reeetrseyvvpavkgflksialsse 340
                  ++ ek+de +  y++a+e+d ++   ++++a+a+ ++++ +   k                                  ++++t  e+ ++a+k++ ++++l s+
  MMETSP1325-20131115|10380_1 127 MNSEKFDESIIQYKKAIELDSTCVMSHYNLASAYHSILDIKSAMKYfksaialksdyadahfnlgicyqdegaklketgKDKKTMLEFYESALKHYKEALRLDSG 231
                  566777777777777777777777777777777777777555333344444444444444444444443333333333345559******************998 PP

>> PF01663.17  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.2     3e-05     0.018     129     228 ..      15     112 ..       3     227 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3e-05
                  ..........-SB-..------..S-H........HHHHHHHHH.HCTS.-TTT-....ECEEEEEEECCCH--------SHCCHHHHHHHHHH--------TTT CS
   PF01663.17 129 gspststky.Peevkdenankkgeeplsakevlekepkvdtilsdvakrlleeer....pdlllvylselDsvgHkfgpdspevedalrrvDraigqLlealder 228
                   + ++++k  Pe++  +n ++ ++e ++     + e+++d+  +  a++   ee+     + ++ ++  lD  +H+ +++   v++ l+  D+ai  + eal+ +
  MMETSP1325-20131115|10380_1  15 EQAILYNKKnPEYF--YNLANAIQEAMN---LHTGEEAGDEMAE--AEHSKREEEaltrAQKMYMEVIKLDPNHHAAWYNLGYVQEELQLFDSAIRSFSEALKLE 112
                  445566666899**..888888999996...3335555555555..9997777779*99********************99999*****************9976 PP

>> PF07738.8  Sad1 / UNC-like C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.22   1.3e+02      35      88 ..      74     128 ..      50     135 .. 0.73
   2 ?   10.3   0.0    0.0007      0.42      34      90 ..     141     197 ..     111     214 .. 0.77

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.22
    PF07738.8  35 vieLseeiiveavtlehveksvapisSapkdfe.vlgseespeekwvllgefsyd 88 
                  vi+L+ + +   ++l  v++++  ++Sa++ f+  l +e  ++++ ++lg+   +
  MMETSP1325-20131115|10380_1  74 VIKLDPNHHAAWYNLGYVQEELQLFDSAIRSFSeALKLEPNDKDAIINLGNTYMN 128
                  6777777777788888899989889*****9961555566666668999987644 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.0007
    PF07738.8  34 vvieLseeiiveavtlehveksvapisSapkdfevlgseespeek.wvllgefsyded 90 
                   +ieL+ +  +++++l+++ +s+  i+Sa+k f+  +  +s+  + + +lg +  +++
  MMETSP1325-20131115|10380_1 141 KAIELDSTCVMSHYNLASAYHSILDIKSAMKYFKSAIALKSDYADaHFNLGICY-QDE 197
                  479999999************8888********988776666555599999876.444 PP

>> PF10516.4  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.41   2.5e+02      13      27 ..       3      17 ..       2      20 .. 0.69
   2 ?    5.2   0.0     0.018        11       7      30 ..     122     145 ..     117     147 .. 0.86
   3 ?    2.2   0.0      0.17        99      15      30 ..     213     228 ..     212     228 .. 0.92

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.41
    PF10516.4 13 EnEnFpqAveDlrka 27
                 E+++F+ A++ ++ a
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQA 17
                 667777777777665 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.018
    PF10516.4   7 LGEiSlEnEnFpqAveDlrkaLeL 30 
                  LG+  + +E+F++ +  ++ka+eL
  MMETSP1325-20131115|10380_1 122 LGNTYMNSEKFDESIIQYKKAIEL 145
                  66666789**************98 PP

  == domain 3    score: 2.2 bits;  conditional E-value: 0.17
    PF10516.4  15 EnFpqAveDlrkaLeL 30 
                  E+++ A++ +++aL L
  MMETSP1325-20131115|10380_1 213 EFYESALKHYKEALRL 228
                  89***********976 PP

>> PF09986.4  Uncharacterized protein conserved in bacteria (DUF2225)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   4.3      0.16        97      91     160 ..       5      81 ..       2     121 .. 0.76
   2 ?    0.9   0.1       0.4   2.4e+02     125     170 ..      84     127 ..      80     142 .. 0.77
   3 ?   12.8   2.1   9.2e-05     0.055      85     162 ..     154     236 ..     125     248 .. 0.75

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.16
    PF09986.4  91 rtldeaiesYkLallcyelkkekkskkAklalrlAWlyrdled.........eekeklflkkAlelykeayekekfpie 160
                   ++++ai+ Y  a+l  + + e   + A  +  +  l    e           + e++ l++A ++y e+++ + +  +
  MMETSP1325-20131115|10380_1   5 HDFEKAIKHYEQAILYNKKNPEYFYNLANAIQEAMNLHTGEEAgdemaeaehSKREEEALTRAQKMYMEVIKLDPN--H 81 
                  67899**********999988888888876666666655554488999999999999************9987765..3 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.4
    PF09986.4 125 AWlyrdledeekeklflkkAlelykeayekekfpiegideatvlYL 170
                  AW+  +l+  ++e ++   A++++ ea++ e ++ + i ++  +Y+
  MMETSP1325-20131115|10380_1  84 AWY--NLGYVQEELQLFDSAIRSFSEALKLEPNDKDAIINLGNTYM 127
                  554..34555788899999999999999999988887766666665 PP

  == domain 3    score: 12.8 bits;  conditional E-value: 9.2e-05
    PF09986.4  85 r....dfskertldeaiesYkLallcyelkkekkskkAklalr.lAWlyrdledeekeklflkkAlelykeayekekfpiegi 162
                       ++    ++++a++ +k a+   +   + + + ++++    A l ++ +d++   +f++ Al++ykea+  ++  +e  
  MMETSP1325-20131115|10380_1 154 YnlasAYHSILDIKSAMKYFKSAIALKSDYADAHFNLGICYQDeGAKLKETGKDKKTMLEFYESALKHYKEALRLDSGMEEAS 236
                  14455899999***************999999999*****986267777777789999***************9988744443 PP

>> PF04781.7  Protein of unknown function (DUF627)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       5.1     3e+03      33      39 ..      18      24 ..       5      40 .. 0.44
   2 ?    4.7   0.0     0.034        20      62     101 ..     100     139 ..      94     142 .. 0.80
   3 ?    7.6   0.8    0.0042       2.5      63     107 ..     135     179 ..     124     184 .. 0.87
   4 ?   -0.1   0.1         1   6.2e+02      91     107 ..     212     228 ..     199     233 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 5.1
    PF04781.7 33 lllhelq 39
                 +l ++++
  MMETSP1325-20131115|10380_1 18 ILYNKKN 24
                 2222222 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.034
    PF04781.7  62 asvecfseavllsslaAlsLfelakelgsvkyYkkavkka 101
                   ++ +fsea +l ++   ++++l++ +  +  +++++ + 
  MMETSP1325-20131115|10380_1 100 SAIRSFSEALKLEPNDKDAIINLGNTYMNSEKFDESIIQY 139
                  5799*********************987666666665554 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0042
    PF04781.7  63 svecfseavllsslaAlsLfelakelgsvkyYkkavkkakeaLsv 107
                  s+  +++a++l s +++s ++la  ++s    k a+k+ k a+  
  MMETSP1325-20131115|10380_1 135 SIIQYKKAIELDSTCVMSHYNLASAYHSILDIKSAMKYFKSAIAL 179
                  778899************************999999999988765 PP

  == domain 4    score: -0.1 bits;  conditional E-value: 1
    PF04781.7  91 vkyYkkavkkakeaLsv 107
                    +Y+ a+k  keaL  
  MMETSP1325-20131115|10380_1 212 LEFYESALKHYKEALRL 228
                  57999999999999975 PP

>> PF05833.6  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   1.8    0.0018       1.1     393     447 ..       8      62 ..       3      69 .. 0.89
   2 ?    2.1   0.1     0.083        49     380     426 ..      65     111 ..      59     120 .. 0.88
   3 ?    2.0   0.2     0.092        54     379     411 ..     215     247 ..     200     248 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0018
    PF05833.6 393 kraveaveeqieetkeeleylesveaqlenaesledleeireEleeegylkekkk 447
                  ++a+++ e++i ++k++ ey++++ +++++a +l++ ee  +E++e +  k++++
  MMETSP1325-20131115|10380_1   8 EKAIKHYEQAILYNKKNPEYFYNLANAIQEAMNLHTGEEAGDEMAEAEHSKREEE 62 
                  7899****************************************99887776554 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.083
    PF05833.6 380 enAqkyYkkykKlkraveaveeqieetkeeleylesveaqlenaesl 426
                   +Aqk Y ++ Kl     a+   + +++eel+ ++s + + ++a +l
  MMETSP1325-20131115|10380_1  65 TRAQKMYMEVIKLDPNHHAAWYNLGYVQEELQLFDSAIRSFSEALKL 111
                  68**********************************99998877555 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.092
    PF05833.6 379 senAqkyYkkykKlkraveaveeqieetkeele 411
                   e A k Yk++ +l +  e++ e+ie   ee++
  MMETSP1325-20131115|10380_1 215 YESALKHYKEALRLDSGMEEASEAIELLTEEMS 247
                  5789999*******************9999985 PP

>> PF10602.4  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.69   4.1e+02      48      65 ..       3      20 ..       2      32 .. 0.84
   2 ?    1.3   0.0      0.28   1.7e+02      35      64 ..     115     144 ..      88     149 .. 0.72
   3 ?    9.5   0.6   0.00089      0.53      17      63 ..     130     177 ..     125     195 .. 0.81
   4 ?    0.2   0.1      0.62   3.7e+02      32      65 ..     208     241 ..     194     247 .. 0.61

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.69
    PF10602.4 48 kigdleeAlkaysrardy 65
                 ++ d+e+A+k y++a  y
  MMETSP1325-20131115|10380_1  3 EAHDFEKAIKHYEQAILY 20
                 567999******998655 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.28
    PF10602.4  35 irraledlaehYlkigdleeAlkaysrard 64 
                   ++a  +l++ Y++  +++e++  y++a +
  MMETSP1325-20131115|10380_1 115 DKDAIINLGNTYMNSEKFDESIIQYKKAIE 144
                  4678899999************99999887 PP

  == domain 3    score: 9.5 bits;  conditional E-value: 0.00089
    PF10602.4  17 eeLdaelkdak.enlikesirraledlaehYlkigdleeAlkaysrar 63 
                  e++d+ + ++k   + ++   + +++la  Y++i d+++A+k+++ a 
  MMETSP1325-20131115|10380_1 130 EKFDESIIQYKkAIELDSTCVMSHYNLASAYHSILDIKSAMKYFKSAI 177
                  678888888885678999999***********************9854 PP

  == domain 4    score: 0.2 bits;  conditional E-value: 0.62
    PF10602.4  32 kesirraledlaehYlkigdleeAlkaysrardy 65 
                  k  + + +e   +hY ++  l++ ++  s+a + 
  MMETSP1325-20131115|10380_1 208 KKTMLEFYESALKHYKEALRLDSGMEEASEAIEL 241
                  3444555566666777777777666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       850  (0.0621709); expected 273.4 (0.02)
Passed bias filter:                      475  (0.0347425); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.85u 0.40s 00:00:01.25 Elapsed: 00:00:00.64
# Mc/sec: 936.08
//
Query:       MMETSP1325-20131115|10382_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   15.2   0.2      0.015   15.0   0.1    1.1  1  PF00839.12 Cysteine rich repeat


Domain annotation for each model (and alignments):
>> PF00839.12  Cysteine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.1   1.1e-06     0.015      17      40 ..       7      33 ..       2      46 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.1e-06
   PF00839.12 17 DykldpkLqkaCkediekfCsei...e 40
                 D  ld  Lq+ C++d+e +Cs++    
  MMETSP1325-20131115|10382_1  7 DRSLDLDLQRTCARDLEALCSAKddaS 33
                 5569999*************9854442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 411.55
//
Query:       MMETSP1325-20131115|10385_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 266.76
//
Query:       MMETSP1325-20131115|10386_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-05   24.8   8.0    3.4e-05   23.6   5.5    1.7  1  PF12906.2 RING-variant domain


Domain annotation for each model (and alignments):
>> PF12906.2  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   5.5   2.5e-09   3.4e-05      17      47 .]       1      41 [.       1      41 [. 0.81

  Alignments for each domain:
  == domain 1    score: 23.6 bits;  conditional E-value: 2.5e-09
                 -------TTS--HHHHHHHHHHHT-SB..........-S-- CS
    PF12906.2 17 pCkCkGslklvHesCleeWlkesaktk..........CelC 47
                 pC C+Gs++++H+sCl+  ++ s++++          C+lC
  MMETSP1325-20131115|10386_1  1 PCDCSGSMQYIHKSCLDDCIQYSKSKQqeacddtppsCDLC 41
                 8********************95555546766777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       949  (0.0694119); expected 273.4 (0.02)
Passed bias filter:                      487  (0.0356202); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|10384_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 221.55
//
Query:       MMETSP1325-20131115|10384_2  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 621.10
//
Query:       MMETSP1325-20131115|10388_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 436.14
//
Query:       MMETSP1325-20131115|10389_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       791  (0.0578555); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 728.49
//
Query:       MMETSP1325-20131115|10390_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-05   22.5   0.6    7.1e-05   22.5   0.4    2.0  2  PF05698.9  Bacterial trigger factor protein (TF) C-terminus
     0.0022   16.7   0.5     0.0025   16.5   0.4    1.1  1  PF07759.7  Protein of unknown function (DUF1615)
  ------ inclusion threshold ------
      0.015   14.5   0.1      0.021   14.0   0.1    1.2  1  PF06456.8  Arfaptin-like domain
      0.053   12.8   5.3       0.02   14.1   1.3    1.8  2  PF06810.6  Phage minor structural protein GP20
      0.069   13.1   0.2       0.14   12.1   0.2    1.5  1  PF11460.3  Protein of unknown function (DUF3007)
      0.086   12.5   0.0       0.12   12.0   0.0    1.3  1  PF07175.6  Osteoregulin
        1.1    9.6   6.9       0.46   10.9   0.3    2.2  2  PF01322.15 Cytochrome C'


Domain annotation for each model (and alignments):
>> PF05698.9  Bacterial trigger factor protein (TF) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.4   3.6e-08   7.1e-05      88     161 ..       3      73 ..       1      74 [. 0.87
   2 !    8.8   3.0   0.00059       1.2      22      93 ..      61     125 ..      52     127 .. 0.75

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 3.6e-08
                  HHHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHCCT----HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH CS
    PF05698.9  88 eeAekrvklgLileeiakeekievteeeikeeieelasqygmepeevkefykkneqlsalkedlleekvvdlll 161
                  e + k++   L + eia +e+i+v+++e++++++ +  q +   ++   ++++   + ++++++ +++v+d+l+
  MMETSP1325-20131115|10390_1   3 EGICKTLGAALAVNEIAAKEGISVDPAEVEDQLAMMKAQAE---QQGDREFDEGSVKGKIEAQMQRDRVIDFLV 73 
                  5567788889*********************9999988777...88999996666666**************98 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.00059
                  HHHHHCCCHHHGGCG--EEE-HHHHHHHHHHHHHHHHHC-......HHHHHHHHHTHCCCHCHHCHHHHHHH CS
    PF05698.9  22 keelkeaildkLvekaeielPeslveeeierllrqflqqleqqgldleeylslsgsseeelreelkeeAekr 93 
                  ++  +++++d Lv++ ++e+  + v++ +e l+ +++ +    g  +ee     ++ e+e  + ++ +Ae  
  MMETSP1325-20131115|10390_1  61 AQMQRDRVIDFLVKEGKVEI--TYVDKSMEELMDEVKGDK-ELGEAFEE----LSDEEKEKAKAMMAAAEAE 125
                  4556789************9..9*************9999.55555555....5566666666666666654 PP

>> PF07759.7  Protein of unknown function (DUF1615)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.4   1.3e-06    0.0025      12     118 ..      14     119 ..       5     127 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.3e-06
    PF07759.7  12 dikealeelkiaktkenvcavlavieqestfqadPkvpglgkiarkeieeraeklkipkllveaalekkspdgktykerldavrtekdldalyddlisa.vplgkkll 118
                  +++e+ ++++i+++  +v   la+++ ++  q d +  +    ++ +ie++ ++ ++  +lv+  + + +  +k+ +e +d+v+ +k+l + +++l ++  + +k ++
  MMETSP1325-20131115|10390_1  14 AVNEIAAKEGISVDPAEVEDQLAMMKAQAEQQGDREFDE--GSVKGKIEAQMQRDRVIDFLVKEGKVEITYVDKSMEELMDEVKGDKELGEAFEELSDEeKEKAKAMM 119
                  666667777777777777777777777777776666554..45789****************99998888888***********************954034444444 PP

>> PF06456.8  Arfaptin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.1e-05     0.021      55      98 ..      82     123 ..      74     127 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.1e-05
    PF06456.8  55 laknlskalldlsqtekelGdvfkdlskrdkqealgeaftatge 98 
                  ++++ ++ l+d ++  kelG++f++ls ++k++a  +a+ a++e
  MMETSP1325-20131115|10390_1  82 YVDKSMEELMDEVKGDKELGEAFEELSDEEKEKA--KAMMAAAE 123
                  67888999********************777777..55555555 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1       0.2   3.9e+02      52      73 ..      27      45 ..      16      72 .. 0.63
   2 ?   14.1   1.3     1e-05      0.02      29      74 ..      73     118 ..      53     127 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.2
    PF06810.6 52 dneeLkkkieklkeknkkkkee 73
                 d  e +++++ +k++ +   ++
  MMETSP1325-20131115|10390_1 27 DPAEVEDQLAMMKAQAE---QQ 45
                 55666666666666666...22 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 1e-05
    PF06810.6  29 ldslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkkeey 74 
                   ++ k +++  dk++e+L ++vk ++eL + +e+l ++ k+k +++
  MMETSP1325-20131115|10390_1  73 VKEGKVEITYVDKSMEELMDEVKGDKELGEAFEELSDEEKEKAKAM 118
                  567788999***************************9999655544 PP

>> PF11460.3  Protein of unknown function (DUF3007)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2     7e-05      0.14      56     100 ..      74     117 ..      68     121 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 7e-05
    PF11460.3  56 Rvvtgkmtymeqrkdyreaydkltqe.elqkrleelseeekealla 100
                  ++ + ++ty  ++k+ +e +d+++ + el + +eels+eeke+ +a
  MMETSP1325-20131115|10390_1  74 KEGKVEITY--VDKSMEELMDEVKGDkELGEAFEELSDEEKEKAKA 117
                  444445555..67999******996659*************99876 PP

>> PF07175.6  Osteoregulin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.3e-05      0.12      81     142 ..      21      84 ..      14     104 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6.3e-05
    PF07175.6  81 rsvlsviPadvndakasskdkkkqqrdllaqksPvkskstrrirrs..idylkhlskikkipsd 142
                  ++ +sv Pa+v+d  a  k + +qq d    +  vk k   +++r+  id+l    k+  +  d
  MMETSP1325-20131115|10390_1  21 KEGISVDPAEVEDQLAMMKAQAEQQGDREFDEGSVKGKIEAQMQRDrvIDFLVKEGKVEITYVD 84 
                  66789********************************999998875338888877777665555 PP

>> PF01322.15  Cytochrome C'
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   0.00024      0.46       9      67 ..       4      62 ..       1      67 [. 0.84
   2 ?    1.9   0.9      0.14   2.8e+02      34      93 ..     102     120 ..      70     127 .. 0.50

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00024
                 HHHHH---THHHHHHHCTS-----HHHHHHHHHHHHHHCCCGCGC.G-CCG-TTT---B- CS
   PF01322.15  9 aafkligknfgalgamakgekpydaaavaaaaaalaalakklpea.fpegsdkgkateak 67
                 ++ k++g++++  +  ak+ + +d a+v++++a ++a a++  +  f egs kgk  ea+
  MMETSP1325-20131115|10390_1  4 GICKTLGAALAVNEIAAKEGISVDPAEVEDQLAMMKAQAEQQGDReFDEGSVKGK-IEAQ 62
                 5678888888888999*******************999987766538******99.6665 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.14
                  HHHHHHHHHHHHHCCCGCGCG-CCG-TTT---B-CHHHHSCCCHHHHHHHHHHHHHHCHH CS
   PF01322.15  34 aavaaaaaalaalakklpeafpegsdkgkateakpaiWedkadfkakaakfeeaaaelaa 93 
                  +a                                         f++  ++ +e+a++++a
  MMETSP1325-20131115|10390_1 102 EA-----------------------------------------FEELSDEEKEKAKAMMA 120
                  33.........................................33333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1205  (0.0881363); expected 273.4 (0.02)
Passed bias filter:                      762  (0.0557343); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.42s 00:00:00.94 Elapsed: 00:00:00.54
# Mc/sec: 568.03
//
Query:       MMETSP1325-20131115|10391_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 386.35
//
Query:       MMETSP1325-20131115|10392_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 769.89
//
Query:       MMETSP1325-20131115|10394_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|10383_1  [L=713]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-34  116.4   0.1    1.2e-33  115.4   0.1    1.6  1  PF02878.11 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
      3e-24   85.0   0.0    9.6e-24   83.4   0.0    1.9  2  PF02880.11 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
    1.6e-08   34.6   0.1      6e-08   32.8   0.1    2.0  1  PF02879.11 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
    2.4e-08   33.7   0.0    5.7e-08   32.5   0.0    1.6  1  PF00408.15 Phosphoglucomutase/phosphomannomutase, C-terminal domain
    2.5e-08   32.7   0.0    3.6e-08   32.2   0.0    1.2  1  PF01704.13 UTP--glucose-1-phosphate uridylyltransferase
  ------ inclusion threshold ------
       0.17   12.2   0.0        2.2    8.6   0.0    2.2  2  PF12182.3  Bacterial lipoprotein


Domain annotation for each model (and alignments):
>> PF02878.11  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.4   0.1   5.2e-37   1.2e-33       2     137 ..     140     288 ..     139     289 .. 0.96

  Alignments for each domain:
  == domain 1    score: 115.4 bits;  conditional E-value: 5.2e-37
                  GGB-SSSB-B-HHHHTSSCCHHHHHHHHHHHHCHHG...SSS-EEEE-----TTHHHHHHHHHHHHCCTT-CEEEE-...---HHHHHHHHHHHH.....B-B--B---TTS-TT---...-B-B--.--B--CHHHHHHHHHHCCT-EE CS
   PF02878.11   2 qlfgtsGiRgkvgegeltpelvlklgqalaeylkae...kkkkkvvvGrDtRvsseelaealaaglaanGvevillg...llptPalsfairklk.....adagimitaSHnPpeyng...iKvylsdGgpispeveekIeeiiekeeee 137
                  q++gtsG+R+k  ++ ++p+++++++qa+++++k+      +k++vvG+D+R++++e++++++++++anGv+ i++g   +l+tPa+s++ir+++       +g+++taSHnP+++n+   iK++ ++Ggp++++v++ I e++++++e+
  MMETSP1325-20131115|10383_1 140 QKPGTSGLRKKTAVF-MEPNYLANFVQAAFSTIKTMgadVANKTLVVGGDGRYFNPEAIQIIVKMAVANGVTRIWIGkdgILSTPAVSAMIRERGpsymsPFGGFILTASHNPGGPNEdfgIKYNVENGGPAPEKVTNGIFEATKTISEY 288
                  89***********87.9*****************9999899****************************************************889988899***************9999************************99987 PP

>> PF02880.11  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         2   4.6e+03      79      97 ..     215     233 ..     206     237 .. 0.81
   2 !   83.4   0.0   4.2e-27   9.6e-24       4     111 .]     450     577 ..     446     577 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2
                  S----HHHHHHHHHHHCTS CS
   PF02880.11  79 tkDGilaallvlellaktg 97 
                   kDGil+  +v +++ ++g
  MMETSP1325-20131115|10383_1 215 GKDGILSTPAVSAMIRERG 233
                  4999999999999998876 PP

  == domain 2    score: 83.4 bits;  conditional E-value: 4.2e-27
                  HHHHHHHCHHHC......H.--.-EEEETTS-CHHHHHHHH----EEEE----CCG--TTT-.-........-S-B--TT.---BTC.SS-SS----HHHHHHHHHHHCTS.......--HHHHHHHHHHH- CS
   PF02880.11   4 qllallakylle......kpga.kvvktvmtslalervakklgvklvetkvGdkyvkekmreeg........avlGgEeS.ghiifl.deattkDGilaallvlellaktg.......kslselleellkky 111
                  + la++a++++       ++g  +v+++++ts a++rvakk+++ l+et++G+ky++++m++++          ++gEeS g+++++ +e   kDG++a+l++l++la  +        +++e++e+++++y
  MMETSP1325-20131115|10383_1 450 S-LAIIADHANVipffrdQGGLkAVARSMPTSGAVDRVAKKNNLALFETPTGWKYFGNLMDSKDlfggvdytPFICGEESfGTGSNHvRE---KDGLWAVLAWLSILADYNadptaplVTVQEIVEKHWATY 577
                  4.4556666644566665444448***************************************666677766799************555...***************54433444557**********998 PP

>> PF02879.11  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.1   2.6e-11     6e-08       2     100 ..     326     439 ..     325     442 .. 0.79

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 2.6e-11
   PF02879.11   2 aYiealaeafd...slealkksglkvvvdplhGvggeilke.llkrlgaevve.lneepdgdfptvkapnpee...ealkllielvkke........gadlglafDgDaDRlgvv 100
                  ++i+ l++ fd   ++  l++ ++++v+d +hG  g+++k+ +l++lg      ln+ep  df + ++ +p     ++l + + l +            ++g+a DgDaDR +++
  MMETSP1325-20131115|10383_1 326 DHIDLLKTVFDfdaIKGLLDRPDFSFVYDSMHGCQGPYAKAcFLEELGQSEDClLNAEPKDDFNG-HHADPNLtyaTDLTACMGLDRTGqpvetatpPPSFGAAADGDADRNMIC 439
                  67888888888776666777789*****************94578899977777***********.666666633545555554444448899999777************9997 PP

>> PF00408.15  Phosphoglucomutase/phosphomannomutase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   2.5e-11   5.7e-08      22      64 ..     631     681 ..     590     690 .. 0.79

  Alignments for each domain:
  == domain 1    score: 32.5 bits;  conditional E-value: 2.5e-11
                  -....-EE--EEEE-SSEEEE.EEE----SE...EEEEEEE-.--HHHHHH CS
   PF00408.15  22 a....stneglkilledGrrvvvRpSGTePl...lRvyvEak.ddeelael 64 
                  +    ++n+g+++l edG+r+v+R+SGT      +R y+Ea+ +d  + ++
  MMETSP1325-20131115|10383_1 631 VdgsvAKNQGIRFLMEDGSRIVFRLSGTAGSgatVRMYLEAYeSDVSKTKQ 681
                  0344469**********************9999*********877665555 PP

>> PF01704.13  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   1.6e-11   3.6e-08     332     416 ..       2      87 ..       1      90 [. 0.84

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 1.6e-11
                  EEE-HHH--B--SSCT.........---.SHHHHHHHHHHHHHHHHHH-.---B..B-----B--S.S-S-------------....- CS
   PF01704.13 332 veVpRdrflpvkttsdLllvksdlynlk.ngslkleelrelktvpvikl.geeFkkveeyksrlps.iPsileldsltvsgdVyfGkn 416
                  v VpR rf pvk+++dLll++sd y +  +  l +++ +     p + l ++++k v+ +++  +   Ps+++   l+v g Vyf ++
  MMETSP1325-20131115|10383_1   2 VCVPRTRFAPVKKCNDLLLLRSDAYVVTpDSRLVMNPVMAAA--PKMGLdSKKYKFVQALEAATELgNPSLINCTALKVDGLVYFTRK 87 
                  78**************************9**********996..5555525667778877776653259****************876 PP

>> PF12182.3  Bacterial lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00099       2.2      29      72 ..     158     201 ..     153     206 .. 0.85
   2 ?    0.7   0.0      0.28   6.3e+02      30      49 ..     668     686 ..     642     692 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00099
    PF12182.3  29 gtlieleddgekeikqvtadltnqrliigddvktykkngnqLtv 72 
                  ++l +  +   ++ik + ad +n++l++g+d + ++ +  q++v
  MMETSP1325-20131115|10383_1 158 NYLANFVQAAFSTIKTMGADVANKTLVVGGDGRYFNPEAIQIIV 201
                  5666667777789**********************998888777 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.28
    PF12182.3  30 tlieleddgekeikqvtadl 49 
                  +l   e+ ++++ kqvtad 
  MMETSP1325-20131115|10383_1 668 YLEAYES-DVSKTKQVTADV 686
                  4555555.55555****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.04u 0.31s 00:00:01.35 Elapsed: 00:00:00.62
# Mc/sec: 2755.81
//
Query:       MMETSP1325-20131115|10393_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-05   24.1   6.0    0.00013   21.9   3.0    2.6  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    0.00018   21.0   2.0       0.46   10.4   0.1    3.8  4  PF07719.12 Tetratricopeptide repeat
      0.001   19.4   0.4         16    6.3   0.0    3.6  3  PF13428.1  Tetratricopeptide repeat
     0.0019   17.5   0.0     0.0032   16.8   0.0    1.3  1  PF03358.10 NADPH-dependent FMN reductase
  ------ inclusion threshold ------
      0.013   15.2   0.0       0.27   11.1   0.0    2.8  3  PF01535.15 PPR repeat
      0.033   14.7   1.1        3.3    8.3   0.0    2.9  3  PF13432.1  Tetratricopeptide repeat
      0.059   12.9   5.3        2.1    7.9   0.8    3.0  3  PF13414.1  TPR repeat
      0.069   12.8   0.1         24    4.8   0.0    3.1  2  PF13181.1  Tetratricopeptide repeat
      0.095   13.0   0.1         34    5.0   0.0    3.9  5  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.23   3.5e+02      32      44 ..       2      14 ..       1      52 [. 0.54
   2 !   21.9   3.0   8.6e-08   0.00013      15      81 ..      55     120 ..      15     126 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.23
                 HHHHHH---HHHH CS
    PF12895.2 32 AlclylngeykrA 44
                 A c++l+++++  
  MMETSP1325-20131115|10393_1  2 ASCFFLLKQFEDV 14
                 5566666665543 PP

  == domain 2    score: 21.9 bits;  conditional E-value: 8.6e-08
                  HCCC-ST-H.HHHCHHH..HHHHHHH---HHHHHHHHHCTSHCHCBHHHHHHHHHHHHHTT-HHHHCCCH CS
    PF12895.2  15 llaespkdp.edaylya..lAlclylngeykrAyellrkleldssslgcryllArcllklgkydeAiavL 81 
                  +  e      +++y y   lA c+ +ng+++ A+el+ k + +++s+    l+A  ++ +g++  A++++
  MMETSP1325-20131115|10393_1  55 VQNE----KyKAEYCYIswLARCYISNGQPRNAWELYLKMDTSNESFNLLQLIANDCYRMGQFLYAAKAF 120
                  2222....224444444447*****************5544445556666699*********66665554 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       6.3   9.6e+03       8      18 ..       2      12 ..       1      13 [. 0.76
   2 ?    4.9   0.0     0.017        26       8      24 ..      36      52 ..      32      57 .. 0.91
   3 ?    3.2   0.0     0.061        92       5      24 ..      68      87 ..      65      90 .. 0.81
   4 !   10.4   0.1    0.0003      0.46       3      33 ..      99     129 ..      97     130 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 6.3
                 HHHHHHTT-HH CS
   PF07719.12  8 Glayyklgdye 18
                 + + + l+++e
  MMETSP1325-20131115|10393_1  2 ASCFFLLKQFE 12
                 66888999998 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.017
                 HHHHHHTT-HHHHHHHH CS
   PF07719.12  8 GlayyklgdyeeAleaf 24
                 G ++++ g+++ A+ea+
  MMETSP1325-20131115|10393_1 36 GISLAQTGNFKAAEEAL 52
                 7899**********997 PP

  == domain 3    score: 3.2 bits;  conditional E-value: 0.061
                 HHHHHHHHHTT-HHHHHHHH CS
   PF07719.12  5 ynlGlayyklgdyeeAleaf 24
                  +l+++y+ +g++  A e++
  MMETSP1325-20131115|10393_1 68 SWLARCYISNGQPRNAWELY 87
                 589*********99885555 PP

  == domain 4    score: 10.4 bits;  conditional E-value: 0.0003
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
   PF07719.12   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                  +l ++++ +y++g++  A++af+   +ldP+
  MMETSP1325-20131115|10393_1  99 LLQLIANDCYRMGQFLYAAKAFDVLERLDPD 129
                  57789***********************997 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.11   1.7e+02       9      24 ..      37      52 ..      35      57 .. 0.87
   2 ?    6.3   0.0     0.011        16       6      26 ..      69      89 ..      66      96 .. 0.88
   3 ?    5.7   0.1     0.017        26       3      38 ..      99     133 ..      97     139 .. 0.70

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.11
    PF13428.1  9 rallalGdpdeAiall 24
                 + l++ G++++A+++l
  MMETSP1325-20131115|10393_1 37 ISLAQTGNFKAAEEAL 52
                 568999********98 PP

  == domain 2    score: 6.3 bits;  conditional E-value: 0.011
    PF13428.1  6 alarallalGdpdeAiallrr 26
                  lar ++ +G+p  A +l+ +
  MMETSP1325-20131115|10393_1 69 WLARCYISNGQPRNAWELYLK 89
                 59*************999976 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.017
    PF13428.1   3 allalarallalGdp...deAiallrralalaPddaeal 38 
                  +l++ a+ + ++G++   ++A ++l+r+   +Pd +e++
  MMETSP1325-20131115|10393_1  99 LLQLIANDCYRMGQFlyaAKAFDVLERL---DPD-PEYW 133
                  5667788899****84445566666665...998.6777 PP

>> PF03358.10  NADPH-dependent FMN reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.1e-06    0.0032      92     147 ..     119     176 ..     116     180 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 2.1e-06
                  HHHCCCH..CCTTTT---EEEEEEE-SS----HHHHHHHHCHHHHTT-EE--SS---T CS
   PF03358.10  92 alDrlsr..rgkkelrgKpvalvavgggragglraeealrpvlaelgavvvpravvav 147
                  a+D+l+r  ++++ ++gK +a+v+v   +  g+ ++e+lr+vla+++ ++ p+ +++v
  MMETSP1325-20131115|10393_1 119 AFDVLERldPDPEYWEGKRGACVGVFQQVVAGKQQREDLRDVLAMVRNTSNPQVEYMV 176
                  899999999***********************************99998888877776 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.55   8.3e+02      10      22 ..      39      51 ..      37      58 .. 0.82
   2 ?   11.1   0.0   0.00018      0.27       8      28 ..      72      92 ..      70      94 .. 0.88
   3 ?   -2.3   0.0       3.4   5.2e+03      18      24 ..     118     124 ..     107     126 .. 0.52

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.55
   PF01535.15 10 yckaGkleeAlel 22
                 +++ G+++ A+e 
  MMETSP1325-20131115|10393_1 39 LAQTGNFKAAEEA 51
                 7899**9999986 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00018
   PF01535.15  8 sgyckaGkleeAlelfkeMke 28
                 ++y ++G+++ A+el+ +M  
  MMETSP1325-20131115|10393_1 72 RCYISNGQPRNAWELYLKMDT 92
                 79*****************65 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 3.4
   PF01535.15  18 eAlelfk 24 
                  +A+++++
  MMETSP1325-20131115|10393_1 118 KAFDVLE 124
                  4555554 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0027       4.1      27      54 ..      24      53 ..      14      60 .. 0.73
   2 ?    8.3   0.0    0.0022       3.3       4      53 ..      36      86 ..      33      96 .. 0.76
   3 ?    2.7   0.1      0.12   1.9e+02       8      32 ..     108     131 ..     102     136 .. 0.60

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0027
    PF13432.1 27 a.PeaaeallllaeallrlgrldeAa.all 54
                 + + + ++ ++ + +l++ g++++A+ all
  MMETSP1325-20131115|10393_1 24 YmYNDDDFNWNHGISLAQTGNFKAAEeALL 53
                 446778888888999999999999995554 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.0022
    PF13432.1  4 ArallraGdydeAlaaleaalala.PeaaeallllaeallrlgrldeAaal 53
                 + +l + G++++A++al  +  +     + +  +la+++   g++  A +l
  MMETSP1325-20131115|10393_1 36 GISLAQTGNFKAAEEALLLVQNEKyKAEYCYISWLARCYISNGQPRNAWEL 86
                 6678999*******9997777777655777778888888888888777555 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.12
    PF13432.1   8 lraGdydeAlaaleaalalaPeaae 32 
                  +r G++  A++a++ + +l+P ++e
  MMETSP1325-20131115|10393_1 108 YRMGQFLYAAKAFDVLERLDP-DPE 131
                  566666666666655555555.455 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.3     2e+03      54      56 ..      11      13 ..       1      32 [. 0.52
   2 ?    7.9   0.8    0.0014       2.1      15      61 ..      41      87 ..      34      90 .. 0.64
   3 ?    5.5   0.0    0.0076        12       6      40 ..     100     133 ..      95     141 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.3
    PF13414.1 54 yee 56
                 +e+
  MMETSP1325-20131115|10393_1 11 FED 13
                 333 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0014
    PF13414.1 15 kegdydeAieayekAleldpnnae.ly.ynlAlaylklgkdyeeAledy 61
                 + g+++ A+ea+        +  e +y + lA +y+ +g +++ A e y
  MMETSP1325-20131115|10393_1 41 QTGNFKAAEEALLLVQNEKYKA-EyCYiSWLARCYISNG-QPRNAWELY 87
                 5555555555554433333333.3577588*********.699999887 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.0076
    PF13414.1   6 lkelGnalfkegdydeAieayekAleldpnnaely 40 
                  l   +n ++++g++  A +a++   +ldp ++e++
  MMETSP1325-20131115|10393_1 100 LQLIANDCYRMGQFLYAAKAFDVLERLDP-DPEYW 133
                  56679*****************9999999.56655 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.017        25      10      25 ..      38      53 ..      32      63 .. 0.85
   2 ?    4.8   0.0     0.016        24       7      20 ..      70      83 ..      62     107 .. 0.89

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.017
                 HHHHTT-HHHHHHHHH CS
    PF13181.1 10 iYrqlGdydkAkeyle 25
                  ++q+G++++A+e+l 
  MMETSP1325-20131115|10393_1 38 SLAQTGNFKAAEEALL 53
                 5799*********996 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.016
                 ---HHHHTT-HHHH CS
    PF13181.1  7 lGdiYrqlGdydkA 20
                 l+++Y ++G+  +A
  MMETSP1325-20131115|10393_1 70 LARCYISNGQPRNA 83
                 89********9998 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       7.9   1.2e+04       6      17 ..       1      12 [.       1      14 [. 0.74
   2 ?    1.4   0.0      0.33   4.9e+02       5      23 ..      34      52 ..      33      58 .. 0.82
   3 ?    5.0   0.0     0.022        34       5      19 ..      69      83 ..      67      92 .. 0.90
   4 ?    0.9   0.0      0.47   7.2e+02       9      32 ..     107     129 ..     100     130 .. 0.66
   5 ?   -2.7   0.0       6.6     1e+04      18      27 ..     139     148 ..     132     149 .. 0.69

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 7.9
                 HHHHHHHHHHHH CS
    PF13174.1  6 lalsyyklgdtd 17
                 +a +++ l++++
  MMETSP1325-20131115|10393_1  1 MASCFFLLKQFE 12
                 688888877765 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHHHHHHHHH CS
    PF13174.1  5 klalsyyklgdtdeAleal 23
                 + + s+ ++g++ +A eal
  MMETSP1325-20131115|10393_1 34 NHGISLAQTGNFKAAEEAL 52
                 5688999999*****9998 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHHHHH CS
    PF13174.1  5 klalsyyklgdtdeA 19
                 +la++y+ +g++++A
  MMETSP1325-20131115|10393_1 69 WLARCYISNGQPRNA 83
                 79******99*9988 PP

  == domain 4    score: 0.9 bits;  conditional E-value: 0.47
                  HHHHHHHHHHHHHHHHHHHHH-TT CS
    PF13174.1   9 syyklgdtdeAlealerlikeyPd 32 
                  +y+++ ++  A +a++ l +  Pd
  MMETSP1325-20131115|10393_1 107 CYRMG-QFLYAAKAFDVLERLDPD 129
                  55544.777777777777666665 PP

  == domain 5    score: -2.7 bits;  conditional E-value: 6.6
                  HHHHHHHHHH CS
    PF13174.1  18 eAlealerli 27 
                  + + ++++++
  MMETSP1325-20131115|10393_1 139 ACVGVFQQVV 148
                  4566899997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      439  (0.0321094); expected 273.4 (0.02)
Passed Vit filter:                        56  (0.00409596); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 897.46
//
Query:       MMETSP1325-20131115|10399_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   13.3   3.1      0.026   13.1   2.1    1.1  1  PF07690.11 Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.1   1.9e-06     0.026     226     293 ..      16      81 ..       2      90 .. 0.38

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.9e-06
   PF07690.11 226 lltllplylqevlglsp.glllaglllgllaligaigalllgrlsdrlgrrrrlllallllllaalgla 293
                  + ++  l lq+ +g+   g ++ +  l  +   g++++++ g l+dr++  +++l++ +l ++++ +l 
  MMETSP1325-20131115|10399_1  16 APFWDKL-LQQGMGIEVnGSYQQL--LVSCVNYGVMFSIVPGMLADRYSCFPTTLVGAGLSAIGYTILG 81 
                  3333333.4555555544323333..2222222222244555555554444444444444444333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.62
# Mc/sec: 351.72
//
Query:       MMETSP1325-20131115|10402_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.038   12.9   0.0      0.062   12.2   0.0    1.3  1  PF02578.10 Multi-copper polyphenol oxidoreductase laccase
        4.1    7.5  12.6        2.2    8.4   5.4    2.3  2  PF11235.3  Mediator complex subunit 25 synapsin 1


Domain annotation for each model (and alignments):
>> PF02578.10  Multi-copper polyphenol oxidoreductase laccase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   9.1e-06     0.062     142     220 ..       7      85 ..       6      95 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 9.1e-06
                  -EE----S-EE-HHHHHHHGGGS-TT---SEEE--...--EEE-HHHHHHHHHHH----GGGEEEEEEETTT.-TT---TTT CS
   PF02578.10 142 GPsIgpccYeVgeevaeafeaelpdaeaafeerae...gkyllDlralaraqLeaaGvkeeniessdlCTyceperffSyRr 220
                  G  I+p + eVg+ v +a + + + ++++ +++++   ++  lD  ala+a L aa v+++ +++ +   + e ++f S ++
  MMETSP1325-20131115|10402_1   7 GAQIKPAAKEVGQAVPAAANGAVTTESEKGKQNNAtleEEAELDAVALAEAALAAASVPPKPVSEMN---MMERNAFWSAKK 85 
                  7899************9998887777777666655788*********************99888844...444555777766 PP

>> PF11235.3  Mediator complex subunit 25 synapsin 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1     0.069   4.7e+02     102     127 ..       9      34 ..       5      47 .. 0.76
   2 ?    8.4   5.4   0.00032       2.2      30     131 ..      58     146 ..      45     152 .. 0.63

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.069
    PF11235.3 102 vLPPgpkgvpkPspasqsslvttvap 127
                  ++ P  k v++  pa+    vtt + 
  MMETSP1325-20131115|10402_1   9 QIKPAAKEVGQAVPAAANGAVTTESE 34 
                  56677788888888888888888664 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00032
    PF11235.3  30 laaapqqpLpPvqpPqmqvpqnssLsaahaaaqkaveaaknqkaslknrfsnltplqnapavgpPfsqapaPvLPPgpkgvpkPspasqsslvttvapgsgl 131
                   +aa + p  Pv    m+++++ ++ +a++ a   +e+ak  k++ +  f + t   +    +pP  q p P              as +s+ + va+ sg+
  MMETSP1325-20131115|10402_1  58 ALAAASVPPKPV--SEMNMMERNAFWSAKKKAALELEKAKKEKEANSHTFKPNTEHSRRSYKAPP-RQ-PRPSTDS---------NASGASTASGVASASGV 146
                  445555666666..899*999999*****99999****************443333333333333.33.3333333.........44444555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       864  (0.0631949); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 763.84
//
Query:       MMETSP1325-20131115|10404_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-06   27.4   7.4        0.4   10.3   0.1    4.4  4  PF00612.22 IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.047   13.0   0.8       0.12   11.7   0.6    1.7  1  PF07877.6  Protein of unknown function (DUF1661)
      0.057   13.3   0.0       0.08   12.8   0.0    1.2  1  PF04699.9  ARP2/3 complex 16 kDa subunit (p16-Arc)


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.3   0.1    0.0077        35       4      20 ..      45      61 ..      43      62 .. 0.80
   2 !   10.3   0.1   8.8e-05       0.4       5      21 .]      69      85 ..      67      85 .. 0.89
   3 !    6.3   0.0    0.0017       7.9       7      17 ..      94     104 ..      93     108 .. 0.86
   4 !    8.3   0.1    0.0004       1.8       4      18 ..     123     137 ..     121     139 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.0077
                 HHHHHHHHHHHHHHCHC CS
   PF00612.22  4 aikIQaawRgylaRkry 20
                 a ++Qa  R+++  + y
  MMETSP1325-20131115|10404_1 45 ASRLQASARRFVYTCLY 61
                 789*******9876655 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 8.8e-05
                 HHHHHHHHHHHHHCHCH CS
   PF00612.22  5 ikIQaawRgylaRkryk 21
                 +k+Qa++R++l   +y+
  MMETSP1325-20131115|10404_1 69 VKLQAQIRAFLGQLHYH 85
                 89*********998885 PP

  == domain 3    score: 6.3 bits;  conditional E-value: 0.0017
                  HHHHHHHHHHH CS
   PF00612.22   7 IQaawRgylaR 17 
                  +Q+++Rg+  R
  MMETSP1325-20131115|10404_1  94 MQSVIRGFNSR 104
                  7*******998 PP

  == domain 4    score: 8.3 bits;  conditional E-value: 0.0004
                  HHHHHHHHHHHHHHC CS
   PF00612.22   4 aikIQaawRgylaRk 18 
                  a k Q+ wR+ ++R 
  MMETSP1325-20131115|10404_1 123 ANKVQCLWRSRKCRE 137
                  5689*********96 PP

>> PF07877.6  Protein of unknown function (DUF1661)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.6   2.6e-05      0.12       6      15 ..     101     110 ..     100     125 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.6e-05
    PF07877.6   6 fnsRAKTKKF 15 
                  fnsRA TKKF
  MMETSP1325-20131115|10404_1 101 FNSRAATKKF 110
                  9********* PP

>> PF04699.9  ARP2/3 complex 16 kDa subunit (p16-Arc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.7e-05      0.08      81     149 ..      31     104 ..      19     107 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.7e-05
    PF04699.9  81 evLqsikasdiekvvkkldseql....DvLmkYlYkgmaapsgasqmsvl..LsWheklvevaGlgsIvrvltdr 149
                   vL++ +++ i +v ++l+ +       +L k +Y g+ + + +   + l  L++h  l+++ G+ s++r +++r
  MMETSP1325-20131115|10404_1  31 FVLETARQAVIPSVASRLQASARrfvyTCLYKRMYIGFVKLQAQIR-AFLgqLHYHTTLTQIEGMQSVIRGFNSR 104
                  5899999999999999996665511225666666666666555544.343449*****************98877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 607.35
//
Query:       MMETSP1325-20131115|10405_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-30  104.8   0.5    1.8e-30  104.5   0.3    1.1  1  PF00085.15 Thioredoxin
    1.9e-10   40.7   0.1    7.3e-10   38.9   0.0    1.8  1  PF13098.1  Thioredoxin-like domain
    8.4e-10   38.5   0.1    5.3e-07   29.6   0.0    2.2  2  PF13905.1  Thioredoxin-like
    1.7e-06   27.5   0.1    2.2e-06   27.2   0.1    1.2  1  PF00578.16 AhpC/TSA family
    2.5e-05   24.1   0.0    3.8e-05   23.5   0.0    1.3  1  PF13899.1  Thioredoxin-like
    6.7e-05   22.3   0.3    0.00013   21.4   0.2    1.5  1  PF08534.5  Redoxin
     0.0046   16.3   0.0     0.0053   16.1   0.0    1.1  1  PF02966.11 Mitosis protein DIM1
     0.0053   16.5   0.0     0.0058   16.4   0.0    1.2  1  PF07449.6  Hydrogenase-1 expression protein HyaE
     0.0085   15.4   0.0       0.01   15.2   0.0    1.1  1  PF13728.1  F plasmid transfer operon protein
     0.0098   15.3   0.0      0.013   14.9   0.0    1.2  1  PF11009.3  Protein of unknown function (DUF2847)
  ------ inclusion threshold ------
      0.024   14.5   0.1        4.4    7.1   0.0    2.3  2  PF13462.1  Thioredoxin
      0.044   13.4   0.0       0.12   12.0   0.0    1.7  2  PF13192.1  Thioredoxin domain
      0.053   13.6   0.0      0.078   13.1   0.0    1.3  1  PF05768.9  Glutaredoxin-like domain (DUF836)


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.5   0.3   1.7e-33   1.8e-30       4      91 ..      21     109 ..      18     112 .] 0.94

  Alignments for each domain:
  == domain 1    score: 104.5 bits;  conditional E-value: 1.7e-33
                  ESSHHHHHHHHHH.HHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEEEE--- CS
   PF00085.15   4 vltkenfeeevak.sdklvlvefyApwCGhCkalaPeyeklaeelkekvvlakvdvdenkdlaseygvegiPtlklfkngkkveevega 91 
                  + t+++f +++++ ++klv+v+f+A+wCG+Ck++aP++++l+ ++ +kv+++kvdvd+ k l+++y+v+++Pt++++kngk+++++ ga
  MMETSP1325-20131115|10405_1  21 CKTEAEFAKALKAaGKKLVVVDFFATWCGPCKQIAPKFAELSGSYGSKVKFLKVDVDKAKALSQKYQVSSMPTFIFLKNGKQMDKLLGA 109
                  678999***99986789*******************************************************************99887 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.0     7e-13   7.3e-10       3     102 ..      34     109 ..      28     110 .. 0.88

  Alignments for each domain:
  == domain 1    score: 38.9 bits;  conditional E-value: 7e-13
    PF13098.1   3 gngkrvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpGy 102
                  + +k v+v+f +++C+ Ck++ ++  +   ++  + +k++++ v++dk+                    k+l +k++v++ Pt++fl ++Gk++ +l G+
  MMETSP1325-20131115|10405_1  34 AGKKLVVVDFFATWCGPCKQIAPKFAE---LSGSYGSKVKFLKVDVDKA--------------------KALSQKYQVSSMPTFIFL-KNGKQMDKLLGA 109
                  45899****************999985...7778888999999999954....................59****************.59**99999886 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0     5e-10   5.3e-07       1      46 [.      36      78 ..      35      81 .. 0.93
   2 !   10.5   0.0   0.00044      0.47      66      93 ..      73     100 ..      69     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 5e-10
    PF13905.1  1 gkivllyfaaswcppckaftpelkelyeklkaskdkveivyVsldr 46
                 +k+v+++f+a+wc+pck+++p+  el  +++    kv+++ V +d+
  MMETSP1325-20131115|10405_1 36 KKLVVVDFFATWCGPCKQIAPKFAELSGSYG---SKVKFLKVDVDK 78
                 599***************************9...8*****999997 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00044
    PF13905.1  66 pfndkrrnklkklykvkaiPtlvvldkd 93 
                   ++ ++ ++l ++y+v+++Pt++ l++ 
  MMETSP1325-20131115|10405_1  73 KVDVDKAKALSQKYQVSSMPTFIFLKNG 100
                  56677899***************99754 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.1   2.1e-09   2.2e-06      19      89 ..      30      98 ..      15     111 .. 0.78

  Alignments for each domain:
  == domain 1    score: 27.2 bits;  conditional E-value: 2.1e-09
   PF00578.16 19 slsdlkgkpvvLffypkdfcpvCttelpalaelyeefkkkgvevigvsvdspeshkkfaeknelnfpllsD 89
                  l+   +k vv+ f+++ +c +C++ +p++ael   + + +v+++ v vd+++++ +  +  +++  +++ 
  MMETSP1325-20131115|10405_1 30 ALKAAGKKLVVVDFFAT-WCGPCKQIAPKFAELSGSYGS-KVKFLKVDVDKAKALSQKYQVSSMPTFIFLK 98
                 56666779*********.*******************95.6***********9776665555555555555 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   3.6e-08   3.8e-05      11      81 ..      30      98 ..      22      99 .. 0.73

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 3.6e-08
    PF13899.1 11 akareegkpllvifgadwcpdCqaldrdvlsdeevkaalaekfvllrvdvterdanleldrqg..vPvvvfld 81
                 a  ++ +k + v+f a+wc++C+ ++  +++       + +k+ +l+vdv++ +a  + + q    P+++fl 
  MMETSP1325-20131115|10405_1 30 ALKAAGKKLVVVDFFATWCGPCKQIAPKFAEL--SGS-YGSKVKFLKVDVDKAKALSQ-KYQVssMPTFIFLK 98
                 333344555666****************9555..334.999**********9998444.33335699999986 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.2   1.2e-07   0.00013      24      66 ..      31      72 ..      14      99 .. 0.75

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 1.2e-07
                 HHHTTSE.EEEE---------IIIIIHHHHTHHHH.HH----EE CS
    PF08534.5 24 sdfkgkk.vvlvfvpgafcptCsaehpyleklaklakekgvdvv 66
                  + +gkk vv+ f+++ +c++C++ +p +++l+  +++k v+++
  MMETSP1325-20131115|10405_1 31 LKAAGKKlVVVDFFAT-WCGPCKQIAPKFAELSGSYGSK-VKFL 72
                 4468999455567777.***********99999888877.6655 PP

>> PF02966.11  Mitosis protein DIM1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     5e-06    0.0053       5      88 ..      21     104 ..      17     110 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 5e-06
   PF02966.11   5 LetkeevdqailseeerlvviRFGrdedaeClklDelLakiaekvknfaviylvdidevpdfnkmyeledpvtvlffyrnkhmk 88 
                   +t+ e  +a++   ++lvv+ F   +   C ++    a+ + +    +++  vd+d+ + +++ y++++  t +f  ++k+m 
  MMETSP1325-20131115|10405_1  21 CKTEAEFAKALKAAGKKLVVVDFFATWCGPCKQIAPKFAELSGSYGSKVKFLKVDVDKAKALSQKYQVSSMPTFIFLKNGKQMD 104
                  578888999************************************************************988999988999885 PP

>> PF07449.6  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   5.5e-06    0.0058      51      98 ..      59     106 ..      23     110 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 5.5e-06
    PF07449.6  51 pELlkafpqalraavvareqeealaerfgvlrlPsllflrdgeylgvl 98 
                  +EL   +  +++   v  ++ +al ++++v+ +P+++fl++g+ +  l
  MMETSP1325-20131115|10405_1  59 AELSGSYGSKVKFLKVDVDKAKALSQKYQVSSMPTFIFLKNGKQMDKL 106
                  78888888889999999999*********************9987665 PP

>> PF13728.1  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   9.6e-06      0.01     107     193 ..      23     100 ..       8     108 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 9.6e-06
    PF13728.1 107 kkqkkekalkklakeyGlfffyrsdcpycealapilqafaekygievlpVsvDGkglpelpnsrkdtgqaqklgvkttPalvlvdpk 193
                   +++  kalk++ k+  ++ f+   c  c++ ap   +++ +yg +v +  vD           k + ++qk +v+ +P+ ++ +  
  MMETSP1325-20131115|10405_1  23 TEAEFAKALKAAGKKLVVVDFFATWCGPCKQIAPKFAELSGSYGSKVKFLKVD---------VDKAKALSQKYQVSSMPTFIFLKNG 100
                  445667999***********************************999999998.........3355777788888888888777655 PP

>> PF11009.3  Protein of unknown function (DUF2847)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.3e-05     0.013       2      89 ..      19     101 ..      18     111 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.3e-05
    PF11009.3   2 kkleteeqleeileeskekpvlifKhsttCgiSaealkefeklaeeeeeelkvyyldvqesrdvSneiaeklgvkHeSPQviviknge 89 
                  k+ +te+++++ l+++ +k+v++    t Cg  ++   +f +l  +  +++k+  +dv +++++S++    ++v    P +i +kng+
  MMETSP1325-20131115|10405_1  19 KECKTEAEFAKALKAAGKKLVVVDFFATWCGPCKQIAPKFAELSGSYGSKVKFLKVDVDKAKALSQK----YQVS-SMPTFIFLKNGK 101
                  67799**********************************************************9964....5554.457777777776 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0042       4.4      14      55 ..      37      76 ..      32      83 .. 0.87
   2 ?    7.1   0.0    0.0044       4.6     122     150 ..      75     105 ..      72     110 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0042
    PF13462.1 14 pvtvieyadltCphCarfheevekllekyidtgkvkfiyref 55
                 + +v+ ++   C  C+++  ++ +l   y    kvkf   ++
  MMETSP1325-20131115|10405_1 37 KLVVVDFFATWCGPCKQIAPKFAELSGSY--GSKVKFLKVDV 76
                 67899************************..88***998877 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0044
    PF13462.1 122 lveadseeakaagiestPtfii..ngkkvee 150
                   v++ ++  ++ +++s+Ptfi   ngk++++
  MMETSP1325-20131115|10405_1  75 DVDKAKALSQKYQVSSMPTFIFlkNGKQMDK 105
                  5677778889**********98899999875 PP

>> PF13192.1  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.3   1.4e+03      13      31 ..      21      38 ..      15      45 .. 0.59
   2 ?   12.0   0.0   0.00011      0.12       7      54 ..      45      95 ..      38     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 1.3
    PF13192.1 13 Cpkleeavkeaaeelgika 31
                 C+ +e+ +++a++  g k+
  MMETSP1325-20131115|10405_1 21 CK-TEAEFAKALKAAGKKL 38
                 54.4555555555555555 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00011
    PF13192.1  7 gpgCakCpkleeavkeaaeelgikaevekv..tdfeei.ekygVmsvPalv 54
                  + C  C++++  ++e    +g k++  kv  ++ + + +ky+V s+P+ +
  MMETSP1325-20131115|10405_1 45 ATWCGPCKQIAPKFAELSGSYGSKVKFLKVdvDKAKALsQKYQVSSMPTFI 95
                 555*******************9998888553777788**********975 PP

>> PF05768.9  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   7.4e-05     0.078      10      49 ..      48      89 ..      43     104 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.4e-05
                 SCHHHHHHHHCCC..CT--..SEEEEEETTTSCCHHHHSSSS CS
    PF05768.9 10 ChLCeqakelLkelkleeg..lelevidIdedevlearYgve 49
                 C+ C+q+  + +el+   g  ++  ++d+d+ ++l ++Y+v 
  MMETSP1325-20131115|10405_1 48 CGPCKQIAPKFAELSGSYGskVKFLKVDVDKAKALSQKYQVS 89
                 99***********99888888999***************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       462  (0.0337917); expected 273.4 (0.02)
Passed bias filter:                      430  (0.0314511); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|10407_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       396  (0.0289643); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 388.21
//
Query:       MMETSP1325-20131115|10400_1  [L=367]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-34  116.2   0.0    6.8e-32  110.1   0.0    2.1  2  PF00270.24 DEAD/DEAH box helicase
    2.6e-28   97.5   0.2    6.3e-28   96.3   0.2    1.7  2  PF00271.26 Helicase conserved C-terminal domain
  ------ inclusion threshold ------
      0.055   13.2   0.0      0.093   12.5   0.0    1.3  1  PF13307.1  Helicase C-terminal domain
      0.082   11.1   0.0       0.28    9.4   0.0    1.9  1  PF06862.7  Protein of unknown function (DUF1253)


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.1   0.0     2e-35   6.8e-32      50     171 ..      43     161 ..      16     163 .. 0.92
   2 !    4.1   0.0    0.0074        25      47     107 ..     212     271 ..     176     286 .. 0.75

  Alignments for each domain:
  == domain 1    score: 110.1 bits;  conditional E-value: 2e-35
                  EEEEEESSHHHHHHHHHHHHHHTTTSS.EEEEETTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHHCCHHTTTEEEEEECTHHHHHCTTTHHHHHHHHHHSHHTTTSEEEEEESS-THHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00270.24  50 kalivaPtreLaeqtlnnlkkfkkypklrvlliiggvalardqlsvldngvdivvgTpgrlddlvstgklnlsqvrllVlDEadrllsqgfsdqlnqilqilcdgkrlqvivlSATlpkdvk 171
                   +l++aPtreLa q+  ++ kf+ + +++ ++++ggv+ +r q s l++gv+iv++Tpgrl+d++++g  nl++v +lVlDEadr+l++gf++q+++i+ +++   ++q+++ SAT+pk+v+
  MMETSP1325-20131115|10400_1  43 ITLVLAPTRELAVQIKGECDKFGGNSGVKNTCVYGGVP-KRTQVSDLRDGVEIVIATPGRLIDHLESGVTNLQRVTYLVLDEADRMLDMGFEPQIRKIVGQIR--PDRQTLMWSATWPKEVE 161
                  689***********************************.55999***888*****************988*******************************94..459**********9986 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.0074
                  STSEEEEEESSHHHHHHHHHHHHHHTTTSS.EEEEETTSSBHHHHHHHHH....T..-SEEEEEH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxx RF
   PF00270.24  47 tikkalivaPtreLaeqtlnnlkkfkkypklrvlliiggvalardqlsvl....dngvdivvgTp 107
                  + +++++ + t+  a q  +++++ +      + +i+g+++++ ++++ l    d+++ i+++T 
  MMETSP1325-20131115|10400_1 212 KGERVIVFVETKRGADQLTRSIRQEGY----PANAIHGDKSQD-ERDRTLqdfrDGRIMILIATD 271
                  344999999999999999999999885....489999999966.555555688999999999995 PP

>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.9     1e+04       6      22 ..      68      84 ..      66      90 .. 0.78
   2 !   96.3   0.2   1.8e-31   6.3e-28       3      78 .]     233     308 ..     231     308 .. 0.98

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 2.9
                 ----EEEE-TTS-HHHH CS
   PF00271.26  6 kgikvailhgelpqner 22
                  g+k ++++g+ p++ +
  MMETSP1325-20131115|10400_1 68 SGVKNTCVYGGVPKRTQ 84
                 57888999999998877 PP

  == domain 2    score: 96.3 bits;  conditional E-value: 1.8e-31
                  HHH----EEEE-TTS-HHHHHHHHHHHHTTTSSEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
   PF00271.26   3 lekkgikvailhgelpqnereeileqfnagkskvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78 
                   +++g+++ ++hg+ +q+er+++l++f++g+  +l+at+va+rG+d+++v++V+nfd+p + ++y++riGR+gRag
  MMETSP1325-20131115|10400_1 233 IRQEGYPANAIHGDKSQDERDRTLQDFRDGRIMILIATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAG 308
                  5899**********************************************************************97 PP

>> PF13307.1  Helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.7e-05     0.093       9      91 ..     213     291 ..     207     303 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.7e-05
    PF13307.1   9 pggvlvffpSyslleevverlkeeleskkievfeekeesrekvleeykeskgaillavcrgkvseGidfsddllraviivglP 91 
                   ++v+vf+   +  +++++ +++e+   ++   ++++++r+++l+++++++  il+a+       G+d++  ++++v+ + +P
  MMETSP1325-20131115|10400_1 213 GERVIVFVETKRGADQLTRSIRQEGYPANAIHGDKSQDERDRTLQDFRDGRIMILIATD--VAARGLDVK--NVQMVVNFDMP 291
                  5799********************97665555566799********************9..9999*9999..45556666655 PP

>> PF06862.7  Protein of unknown function (DUF1253)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   8.1e-05      0.28     302     394 ..     215     305 ..     135     338 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 8.1e-05
    PF06862.7 302 gvlifipsYfdyvrirnylkkekisFaaiseytsekkisrarklFkkgrkkiLLvteRlhfyrRykikgvkkvifyslPefpefYseliklla 394
                  +v++f+ +     +++  +++e +   ai+   s+ +  r+ + F +gr+ iL+ t+ +   r   +k+v+ v+ + +P+++e Y   i    
  MMETSP1325-20131115|10400_1 215 RVIVFVETKRGADQLTRSIRQEGYPANAIHGDKSQDERDRTLQDFRDGRIMILIATDVAA--RGLDVKNVQMVVNFDMPNNAEDYVHRIGRCG 305
                  555555555555566666677777777889999999*********************886..899*****************99987775554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.38s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1570.47
//
Query:       MMETSP1325-20131115|10408_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.2    7.4   4.1        1.6    6.9   2.9    1.1  1  PF10243.4 Microtubule-binding protein MIP-T3


Domain annotation for each model (and alignments):
>> PF10243.4  Microtubule-binding protein MIP-T3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   2.9   0.00011       1.6     289     330 ..      37      78 ..      18      82 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00011
    PF10243.4 289 sksktkktnskeevqrertslrrpsarpasARpapPRvKrkn 330
                    + +++++s+++++++++     s +  sARp  P+ K+ +
  MMETSP1325-20131115|10408_1  37 PGPAMPRATSEPTIANDKSKGPESSGAKTSARPTTPKKKEED 78 
                  55678999*****************************88865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 943.57
//
Query:       MMETSP1325-20131115|10409_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 436.48
//
Query:       MMETSP1325-20131115|10411_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.18   11.6   0.0    1.3  1  PF10440.4 Ubiquitin-binding WIYLD domain


Domain annotation for each model (and alignments):
>> PF10440.4  Ubiquitin-binding WIYLD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.3e-05      0.18       8      41 ..      50      83 ..      44      84 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.3e-05
    PF10440.4  8 krridaAidrmrelGikkevikpvlkeLLelyge 41
                  r++ aA  +  ++G   +vi++  + L +l ++
  MMETSP1325-20131115|10411_1 50 ARHMRAAQSHFNQYGASHPVISQATNYLIALDER 83
                 499***********************99998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|10412_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-15   53.7   0.0      9e-15   53.6   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   6.6e-19     9e-15     580     707 ..       2     126 ..       1     127 [. 0.91

  Alignments for each domain:
  == domain 1    score: 53.6 bits;  conditional E-value: 6.6e-19
   PF03028.10 580 airQsvarknkwpLdklalqvevtkkekeetesapeegvyveGlfleGarwdlkekllaesklkellsalpviwvkaveadkkeeksvyecPvYktkaRkeltlvltlklktke..kkskwilagvalll 707
                  a+rQ++a+  ++pLd+l+l+v++ +     +  +++ ++ v+Gl++eGa+w+  ++l + +++k  l+++ + w +  +   + +  ++ +P+Y+++ R++  l+++++l  +e   +s ++++g++l++
  MMETSP1325-20131115|10412_1   2 ATRQHTAQVTQVPLDELVLTVSMQEPGATAK--SSDVTFKVKGLQIEGAAWEP-AGLALADAIKAPLPPVLLSWERRSDDAGTASGLEIMVPLYLNESRAD--LLCKVDLVRQEgtAASAFYQRGIGLVA 126
                  99********************996655544..47999**************9.9999999****************************************..8888888887777999********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 640.66
//
Query:       MMETSP1325-20131115|10413_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0031   17.0   0.0     0.0052   16.2   0.0    1.3  1  PF00990.16 GGDEF domain


Domain annotation for each model (and alignments):
>> PF00990.16  GGDEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.8e-07    0.0052      25      89 ..      86     153 ..      71     162 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 3.8e-07
                  HH--.---EEEEEEEETTHHHHHHH-------HHHHHHHHHHHCTS-T..TSEEEE-.---EEEEEEE CS
   PF00990.16  25 raareqkslalllldldnFkeindtyGhaaGDevLqevaqrLssslrr..sdlvaRl.ggdeFiillp 89 
                  +++ e ++ ++++ d+d + ++n+++G +  +  +++  +  ++  ++  + +v+R+ ggdeF ++ p
  MMETSP1325-20131115|10413_1  86 KHSAELSKYSFVFADVDFLHQLNENLGYERVNMRIKQTFKMYRDKYHSppDCVVFRWfGGDEFGLITP 153
                  3333468899************************************99988899**879*****9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 1071.02
//
Query:       MMETSP1325-20131115|10410_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-21   76.6   0.0    2.6e-21   75.8   0.0    1.4  1  PF04072.9 Leucine carboxyl methyltransferase


Domain annotation for each model (and alignments):
>> PF04072.9  Leucine carboxyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   0.0   1.9e-25   2.6e-21      73     176 ..       1     119 [.       1     120 [. 0.90

  Alignments for each domain:
  == domain 1    score: 75.8 bits;  conditional E-value: 1.9e-25
                  CSEEEEE------HHHHHHHTTT.............TEEEEEEE-HHHHHHHHHHHHHSHHHHHCE-SEEE--TTS...HHHHHHHHHHTT-TTSTEEEEEESSGGGS-HHHHHHHHHHH CS
    PF04072.9  73 arqvVnLGaGlDtrayRldwpag.............gvrvfEvDlpevielKerllkesgarppaevryvavdlrd...ddwldaLaaagfdadrptlflaegllmYlteeavdallrai 176
                  arq V+LGaG+D+ra+R     +             +++v+EvD+p + ++Ke ll+ + a   a++++v+ d+ +   d w++ L+++gfd++ pt++l+egll+Yl+e++ ++++r i
  MMETSP1325-20131115|10410_1   1 ARQLVLLGAGMDARAFRAFAATEdsapvdgamvtlpELHVYEVDQPTTFDVKEPLLAGE-ALTVASRTTVGYDFATqggDGWATSLKESGFDPTVPTVWLLEGLLYYLSEADNETVMRLI 119
                  58***************9876667899******************************98.666677778999998866679*****************************9999888755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.60
# Mc/sec: 1286.04
//
Query:       MMETSP1325-20131115|10414_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 1096.21
//
Query:       MMETSP1325-20131115|10415_1  [L=233]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-42  145.3  14.6    1.8e-42  145.1  10.1    1.0  1  PF03006.15 Haemolysin-III related
      0.004   16.2  10.9     0.0056   15.7   1.4    2.2  2  PF05875.7  Ceramidase
  ------ inclusion threshold ------
       0.17   11.7   0.7        0.7    9.7   0.0    2.3  2  PF14015.1  Protein of unknown function (DUF4231)


Domain annotation for each model (and alignments):
>> PF03006.15  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.1  10.1   3.9e-46   1.8e-42       5     222 .]      12     207 ..       8     207 .. 0.92

  Alignments for each domain:
  == domain 1    score: 145.1 bits;  conditional E-value: 3.9e-46
   PF03006.15   5 netlniwtHligailfivlailllslaevksvsklarvvvliyllgllllllaStlyHllschseqkvrsiflrlDyagIylliagsytplllyafacapklgllylvliwilavlGilvkllpvfsrkefrvlravlfllmgllgvipilhlilileslgeaaalvllvlggvlyllGavfyatriPErlkpgkfdivghsHqifHvfVvlgallhy 222
                   e+ln++tH++g++l++++ + l   a      + +r+++++y l+l++l++aStlyH++ + +  k r+ifl+lD+a+Iylliag+ytp+l++ f +++ ++  +l+++wi++++Gi +  +   +++  +++++ l+l+mg++  +   +l++il++      l l+++gg+ y++G+ f+++         ++      H+i+HvfV++g++lh+
  MMETSP1325-20131115|10415_1  12 AEVLNSVTHGVGIVLCLIGQMELHRKALEL---DRHRLACTVYSLSLITLYTASTLYHSFFMLK--KTRDIFLFLDHAAIYLLIAGTYTPFLVICFPDKKLWSRNLLAFLWICSICGITCDAIVP-ASPTKKRFSLCLYLAMGWSVSLCGSDLYEILPQEA----LYLVLAGGLAYTAGVPFFVMN-------RNY-----THAIWHVFVLAGSILHW 207
                  79**************66666666555433...358***********************88855..59****************************************************99998.89999***************************766....********************9.......788.....9**************95 PP

>> PF05875.7  Ceramidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   1.4   1.2e-06    0.0056      23      78 ..      10      70 ..       7     155 .. 0.77
   2 !    5.6   1.2    0.0015       6.8     215     238 ..     191     213 ..     174     219 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.2e-06
    PF05875.7 23 yiAEfvNTltnllfillglygilsllr.....nklekrfllaylgllvvGlgSalFHaTLk 78
                  +AE++N++t  + i+l+l+g ++l+r     ++++ ++++  l+l+++ ++S+l+H+   
  MMETSP1325-20131115|10415_1 10 VMAEVLNSVTHGVGIVLCLIGQMELHRkalelDRHRLACTVYSLSLITLYTASTLYHSFFM 70
                 68*************************9999999999999*****************8654 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0015
    PF05875.7 215 lHgwWHiltglgaylyivllaylr 238
                   H++WH+++  g+ l+  + +yl 
  MMETSP1325-20131115|10415_1 191 THAIWHVFVLAGSILHWFC-IYLY 213
                  7********9999887665.5554 PP

>> PF14015.1  Protein of unknown function (DUF4231)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.27   1.2e+03      15      40 ..      75     100 ..      64     106 .. 0.82
   2 ?    9.7   0.0   0.00015       0.7      11      38 ..     106     141 ..     101     194 .. 0.64

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.27
    PF14015.1  15 rrrynllriitiilgvlaavvpilvs 40 
                  r+ + +l  ++i l+++++ +p lv 
  MMETSP1325-20131115|10415_1  75 RDIFLFLDHAAIYLLIAGTYTPFLVI 100
                  67777888899999999999999876 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00015
    PF14015.1  11 aerarrrynllriitiilgvlaavvpi........l 38 
                  + ++r++  +l i++i+++++ a+vp+        l
  MMETSP1325-20131115|10415_1 106 KLWSRNLLAFLWICSICGITCDAIVPAsptkkrfsL 141
                  568999999******************444444331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 1073.75
//
Query:       MMETSP1325-20131115|10417_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 904.75
//
Query:       MMETSP1325-20131115|10421_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-11   43.6   0.1      2e-11   43.3   0.1    1.1  1  PF01255.14 Putative undecaprenyl diphosphate synthase


Domain annotation for each model (and alignments):
>> PF01255.14  Putative undecaprenyl diphosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.1   1.4e-15     2e-11       1      46 [.      41      86 .]      41      86 .] 0.99

  Alignments for each domain:
  == domain 1    score: 43.3 bits;  conditional E-value: 1.4e-15
   PF01255.14  1 ImDGNrRwakkkgletaeGheaGaealkevleiclelgvkvvtvya 46
                 ImDGNrR+ + k ++  +Gh  G ++l +++++c+e gv+v+tvya
  MMETSP1325-20131115|10421_1 41 IMDGNRRYGRVKYKDALKGHWDGGQTLVDTVRWCMEEGVQVLTVYA 86
                 9********************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 404.09
//
Query:       MMETSP1325-20131115|10420_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       597  (0.0436659); expected 273.4 (0.02)
Passed bias filter:                      548  (0.0400819); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.41s 00:00:01.03 Elapsed: 00:00:00.55
# Mc/sec: 1167.68
//
Query:       MMETSP1325-20131115|10423_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 254.61
//
Query:       MMETSP1325-20131115|10422_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 546.99
//
Query:       MMETSP1325-20131115|10424_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.41s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 362.00
//
Query:       MMETSP1325-20131115|10425_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 549.17
//
Query:       MMETSP1325-20131115|10426_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 322.77
//
Query:       MMETSP1325-20131115|10429_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10431_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-15   55.3   0.5    3.5e-08   32.7   0.0    2.9  3  PF00023.25 Ankyrin repeat
    6.9e-15   54.6   0.5    3.8e-10   39.5   0.0    2.3  2  PF13857.1  Ankyrin repeats (many copies)
    2.7e-14   53.1   0.1    1.7e-07   31.4   0.0    2.4  2  PF13637.1  Ankyrin repeats (many copies)
    9.3e-14   51.4   0.5    2.5e-12   46.8   0.3    2.0  1  PF12796.2  Ankyrin repeats (3 copies)
      3e-11   42.2   0.0    1.9e-05   24.3   0.0    2.7  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0     2e-07   0.00054       1      28 [.       6      33 ..       6      35 .. 0.94
   2 !   32.7   0.0   1.3e-11   3.5e-08       2      32 ..      44      74 ..      43      75 .. 0.96
   3 ?   -0.5   0.0      0.41   1.1e+03       1      21 [.      76      96 ..      76     104 .. 0.79

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 2e-07
                 TSCBHHHHHHHTTHHHHHHHHHHTTSST CS
   PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdl 28
                 d +TPLH Aa+ g+++    L+ + A++
  MMETSP1325-20131115|10431_1  6 DNNTPLHRAAYFGHVSTSAVLIAAMASV 33
                 789*********************9998 PP

  == domain 2    score: 32.7 bits;  conditional E-value: 1.3e-11
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                 G+TPL+ Aa+rg+ evv+lL+++GA + a++
  MMETSP1325-20131115|10431_1 44 GETPLMAAASRGRDEVVRLLVKAGAAISATN 74
                 99*************************9998 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.41
                 TSCBHHHHHHHTTHHHHHHHH CS
   PF00023.25  1 dGfTPLHlAalrgnlevvklL 21
                 dG ++  lA +r+++  ++lL
  MMETSP1325-20131115|10431_1 76 DGKSAADLALKRNQTTTATLL 96
                 677777799999999888887 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   2.2e-05     0.059      12      30 ..       3      21 ..       1      32 [. 0.80
   2 !   39.5   0.0   1.4e-13   3.8e-10      10      56 .]      38      84 ..      33      84 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.2e-05
    PF13857.1 12 tdeggntpLhlAakggale 30
                 t+e +ntpLh Aa+ g+++
  MMETSP1325-20131115|10431_1  3 TNEDNNTPLHRAAYFGHVS 21
                 567777***********87 PP

  == domain 2    score: 39.5 bits;  conditional E-value: 1.4e-13
    PF13857.1 10 natdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                 + ++ +g+tpL+ Aa++g+ evvrlL+++ga++ +++sdg +a dlA
  MMETSP1325-20131115|10431_1 38 DVLNAAGETPLMAAASRGRDEVVRLLVKAGAAISATNSDGKSAADLA 84
                 45667788*************************************99 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0     3e-07   0.00081      30      53 ..       3      26 ..       1      27 [. 0.83
   2 !   31.4   0.0   6.3e-11   1.7e-07       3      52 ..      46      95 ..      38      96 .. 0.93

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 3e-07
    PF13637.1 30 tdesGntaLhiAalrgnieilklL 53
                 t+e++nt+Lh+Aa++g+++    L
  MMETSP1325-20131115|10431_1  3 TNEDNNTPLHRAAYFGHVSTSAVL 26
                 59***************9876555 PP

  == domain 2    score: 31.4 bits;  conditional E-value: 6.3e-11
    PF13637.1  3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilkl 52
                 t+L+ aa+ gr e+v+lL++ g+ i +t+++G +a ++A++r++   + l
  MMETSP1325-20131115|10431_1 46 TPLMAAASRGRDEVVRLLVKAGAAISATNSDGKSAADLALKRNQTTTATL 95
                 89****************************************99766655 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.3     9e-16   2.5e-12       1      79 [.      11      97 ..      11     104 .. 0.94

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 9e-16
    PF12796.2  1 LhlAaengnlelvklLlekgadvdl........getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLl 79
                 Lh Aa  g++++   L+++ a+v          getpL++Aa++g+ e+v+lL++aga + a++ +g+++  lA + +++ ++ lL 
  MMETSP1325-20131115|10431_1 11 LHRAAYFGHVSTSAVLIAAMASVGEgvdvlnaaGETPLMAAASRGRDEVVRLLVKAGAAISATNSDGKSAADLALKRNQTTTATLLG 97
                 8*****************9999999999999************************************************99999985 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.6e-06     0.018       1      23 [.       6      28 ..       6      35 .. 0.79
   2 !   24.3   0.0   7.1e-09   1.9e-05       2      29 ..      44      71 ..      43      72 .. 0.94
   3 ?   -2.3   0.0       2.7   7.3e+03       2      16 ..      77      91 ..      76      97 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.6e-06
    PF13606.1  1 nGnTpLhlAasngrielveaLle 23
                 ++nTpLh Aa++g+++    L+ 
  MMETSP1325-20131115|10431_1  6 DNNTPLHRAAYFGHVSTSAVLIA 28
                 579***********987666665 PP

  == domain 2    score: 24.3 bits;  conditional E-value: 7.1e-09
    PF13606.1  2 GnTpLhlAasngrielveaLlengadin 29
                 G+TpL+ Aas+gr e+v++L+++ga i+
  MMETSP1325-20131115|10431_1 44 GETPLMAAASRGRDEVVRLLVKAGAAIS 71
                 9***********************9986 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 2.7
    PF13606.1  2 GnTpLhlAasngrie 16
                 G ++ +lA++++++ 
  MMETSP1325-20131115|10431_1 77 GKSAADLALKRNQTT 91
                 667778888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 802.05
//
Query:       MMETSP1325-20131115|10427_1  [L=457]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-21   74.1   4.8      1e-20   73.4   3.3    1.2  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
      0.029   13.9   0.0      0.078   12.5   0.0    1.7  1  PF10198.4  Histone acetyltransferases subunit 3


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.4   3.3   1.5e-24     1e-20     249     396 ..      21     193 ..       2     195 .. 0.82

  Alignments for each domain:
  == domain 1    score: 73.4 bits;  conditional E-value: 1.5e-24
                  -----------------TTT------------------------CHHHHHHTS-HTTGG-----------------TTSTT--.......................-----------..-HHHHHHHHHHHHHHH---T....TT---HHHHHH---B-XHHHHHXXXHHHHXXX CS
   PF00909.16 249 invlglanGilAGlVAiTaacavvepwgAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv.......................askisggllsgegkqlvvqligilvilayafvv....tlilllllklllgLrvseeeeevglDvaehge 396
                   ++  ++ G+lA  +A+++++ + + + A i+G  A +++++++  + ++l+idDs  v+a+H +gG+wGl+avg+f ++  +                       +++  g ++++     + ql+++ + ++++f+v    ++i++l+++ + gLrv+++ e+ g+D + +g 
  MMETSP1325-20131115|10427_1  21 ASIELTIGGMLAACAAVSSGAPFYDQVCAAIVGGGA-AIAYIVFGTIVNQLRIDDSASVIAIHFIGGAWGLVAVGVFTDSTHYkhafdglidhnelitggdienprIERCMGIFFGK-IGTTGDQLAAQFAYMLWTFAVmlpgMYIVFLIVQEITGLRVDPDMEKDGIDRHFYGG 193
                  56778999*************************999.889999999*********************************998899*****************999655555555444.44555555555555555555511116788889999999*************998875 PP

>> PF10198.4  Histone acetyltransferases subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.1e-05     0.078      23      62 ..     213     256 ..     155     260 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.1e-05
    PF10198.4  23 gaddeddwadgredDE....vaaelrelqaeLkevskvNearkk 62 
                  ++ d d++++++edDE    ++++++++q+++ +++k+N+++k+
  MMETSP1325-20131115|10427_1 213 EEPDYDTIQKAQEDDEetatIMSKVKKVQKKVLAQQKMNHEEKQ 256
                  4556666669999999777788899****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       922  (0.0674371); expected 273.4 (0.02)
Passed bias filter:                      479  (0.0350351); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.35s 00:00:01.20 Elapsed: 00:00:00.54
# Mc/sec: 2028.03
//
Query:       MMETSP1325-20131115|10437_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 738.88
//
Query:       MMETSP1325-20131115|10434_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 488.67
//
Query:       MMETSP1325-20131115|10438_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-20   73.5   2.4      2e-20   73.2   1.7    1.1  1  PF00487.19 Fatty acid desaturase


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   1.7   1.4e-24     2e-20     129     256 ..      21     161 ..       3     162 .. 0.81

  Alignments for each domain:
  == domain 1    score: 73.2 bits;  conditional E-value: 1.4e-24
   PF00487.19 129 g..........lalllallilalllalaglllllsglgalllyvvplalaltvlllvnyleHyglet.....ednnaardfyenqlltssn.segswvlnllsgnlnyHieHHlfPgvpwyrLpelhprlreelkehgvrynsl 256
                              +ll   ++l+l  +++g +++ ++  +lll+ v++ ++++++++ n   H+g ++     +  ++ ++fy +q++ s+n  +g+ v ++++g+lny++eHHl+P+++   +++ +p++++ +++hg++y+++
  MMETSP1325-20131115|10438_1  21 SfpeffgkvvgPYLLGHFFLLPLPMLFFGQTAYMNSVFNLLLADVVTNIHAFIVIATN---HAGKDLytfsnGCAPNSGTFYMRQVVSSANfRTGGDVNDFMHGWLNYQVEHHLWPQLSALSYQRSQPEVKALCEKHGIPYTQE 161
                  1333444566444444444444444455559999999999999999999999999999...***********99999****************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1107.12
//
Query:       MMETSP1325-20131115|10432_1  [L=607]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-29   99.6   0.0    8.5e-18   63.8   0.0    2.4  2  PF00085.15 Thioredoxin
      4e-11   42.9   0.0    9.3e-05   22.4   0.0    2.6  2  PF13098.1  Thioredoxin-like domain
    4.2e-06   26.5   0.1       0.12   12.3   0.0    2.7  2  PF13899.1  Thioredoxin-like
      2e-05   24.5   0.1      0.017   15.1   0.0    2.8  3  PF13905.1  Thioredoxin-like
    0.00023   20.7   0.0       0.11   12.0   0.0    2.5  2  PF00578.16 AhpC/TSA family
     0.0005   19.6   0.0       0.71    9.6   0.0    3.1  3  PF13192.1  Thioredoxin domain
     0.0017   18.2   0.0     0.0097   15.8   0.0    2.2  2  PF13462.1  Thioredoxin
  ------ inclusion threshold ------
      0.011   15.1   0.0        1.8    7.9   0.0    2.2  2  PF13728.1  F plasmid transfer operon protein
      0.012   15.0   0.0       0.08   12.3   0.0    2.2  2  PF01323.15 DSBA-like thioredoxin domain
      0.033   13.6   0.0       0.26   10.7   0.0    2.2  2  PF08534.5  Redoxin
      0.068   13.0   1.0        5.8    6.8   0.0    2.7  2  PF00462.19 Glutaredoxin
       0.13   12.3   0.0        1.3    9.2   0.0    2.4  2  PF05768.9  Glutaredoxin-like domain (DUF836)


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   0.0   7.5e-21   8.5e-18       4     102 ..       8     116 ..       5     118 .. 0.92
   2 !   33.4   0.0   2.1e-11   2.4e-08       6      81 ..     459     537 ..     454     553 .. 0.84

  Alignments for each domain:
  == domain 1    score: 63.8 bits;  conditional E-value: 7.5e-21
                  ESSHHHHHHHHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-..........TSEEEEEETT..TTHHHHHHTT--SSSEEEEESSSSEEEEE---.-HHHHHHHHH CS
   PF00085.15   4 vltkenfeeevaksdklvlvefyApwCGhCkalaPeyeklaeelke..........kvvlakvdvd..enkdlaseygvegiPtlklfkngkkveevegarekeklvaflk 102
                   l++e+f++ +++ ++  lve yApwCGhCk+l+P ++++a++l++           vvlak d++  + ++l ++++v+g+P l +f +g    +++g+r+++ +v+ ++
  MMETSP1325-20131115|10432_1   8 LLSEESFDQILKQ-NEIGLVEAYAPWCGHCKKLKPAFAAAATQLAQateldgvslkPVVLAKFDAThpKLRELGEKLSVDGFPSLFVFFKGIVF-DFKGKRTQKGIVDEMR 116
                  578899**99999.******************************99999******99*********66679***************99998766.9**********99886 PP

  == domain 2    score: 33.4 bits;  conditional E-value: 2.1e-11
                  SHHHHHHHHHHHH.SCEEEEEE-TT---HHHHHHHHHHHHHHTT-...TSEEEEEETTTTHHHHHHTT--SSSEEEEESS CS
   PF00085.15   6 tkenfeeevaksd.klvlvefyApwCGhCkalaPeyeklaeelke...kvvlakvdvdenkdlaseygvegiPtlklfkn 81 
                  + + +ee+v  s  ++v++ ++ p C hC+++ P++ek+a+e ++   +v ++ +d+++n+      + eg+Pt++l+++
  MMETSP1325-20131115|10432_1 459 VGSMWEEVVLGSWlQDVVIVYFDPDCPHCQKMLPVLEKVAKEASQarpNVSFLMLDITANDP-NGWENPEGVPTVHLYPA 537
                  5667888888744599******************************************9965.55557799***999986 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.4e-06    0.0027      13     101 ..      29     104 ..      19     115 .. 0.72
   2 !   22.4   0.0   8.2e-08   9.3e-05       7      55 ..     474     520 ..     472     583 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 2.4e-06
    PF13098.1  13 tdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpG 101
                   +p+C+ Ckkl++   +    +  l++  e+  v+++     +  + ++d       + +elg+kl v+g P+++++  +G  v+ ++G
  MMETSP1325-20131115|10432_1  29 YAPWCGHCKKLKPAFAA---AATQLAQATELDGVSLK-----PVVLAKFDAT---HPKLRELGEKLSVDGFPSLFVFF-KGI-VFDFKG 104
                  579**********9984...55566656667666666.....3344456665...45668**************9985.454.344555 PP

  == domain 2    score: 22.4 bits;  conditional E-value: 8.2e-08
    PF13098.1   7 rvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskers 55 
                   v++v+ dpdCp C+k+ + l+k+++ ++  + ++ +++++i  ++  +
  MMETSP1325-20131115|10432_1 474 DVVIVYFDPDCPHCQKMLPVLEKVAKEASQARPNVSFLMLDITAND--P 520
                  599*******************999988888889999999987443..2 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0    0.0001      0.12       8      44 ..      12      48 ..       9      96 .. 0.63
   2 !   11.5   0.0   0.00018       0.2      22      81 ..     477     536 ..     473     537 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.0001
    PF13899.1  8 ealakareegkpllvifgadwcpdCqaldrdvlsdee 44
                 e + +  +++   lv  +a wc++C++l+ ++++  +
  MMETSP1325-20131115|10432_1 12 ESFDQILKQNEIGLVEAYAPWCGHCKKLKPAFAAAAT 48
                 55667778888889999************99887633 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 0.00018
    PF13899.1  22 vifgadwcpdCqaldrdvlsd.eevkaalaekfvllrvdvterdanleldrqgvPvvvfld 81 
                  ++  + +cp+Cq++  ++++  +e  +  + ++ +l +d+t  d+n     +gvP+v +++
  MMETSP1325-20131115|10432_1 477 IVYFDPDCPHCQKMLPVLEKVaKEASQ-ARPNVSFLMLDITANDPNGWENPEGVPTVHLYP 536
                  4445889*******9999987456666.89***************99655689****9987 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.012        14       3      31 ..      23      51 ..      21      62 .. 0.79
   2 ?   -1.8   0.0       2.7   3.1e+03      71      89 ..      75      93 ..      61      95 .. 0.76
   3 !   15.1   0.0   1.5e-05     0.017       2      45 ..     474     516 ..     473     525 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.012
    PF13905.1  3 ivllyfaaswcppckaftpelkelyeklk 31
                 i l+  +a+wc++ck+  p   +  ++l 
  MMETSP1325-20131115|10432_1 23 IGLVEAYAPWCGHCKKLKPAFAAAATQLA 51
                 5578899*********9998888777765 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 2.7
    PF13905.1 71 rrnklkklykvkaiPtlvv 89
                 +  +l +++ v ++P+l+v
  MMETSP1325-20131115|10432_1 75 KLRELGEKLSVDGFPSLFV 93
                 4568889999999999987 PP

  == domain 3    score: 15.1 bits;  conditional E-value: 1.5e-05
    PF13905.1   2 kivllyfaaswcppckaftpelkelyeklkaskdkveivyVsld 45 
                  ++v++yf  ++cp+c++ +p+l+++ ++  +++++v+++++ + 
  MMETSP1325-20131115|10432_1 474 DVVIVYFD-PDCPHCQKMLPVLEKVAKEASQARPNVSFLMLDIT 516
                  57888875.57**************9999999999999988776 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0077       8.8      27      70 ..      23      64 ..      11      87 .. 0.79
   2 !   12.0   0.0   9.8e-05      0.11      15      63 ..     463     511 ..     449     565 .. 0.79

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0077
   PF00578.16 27 pvvLffypkdfcpvCttelpalaelyeefkkkgvevigvsvdsp 70
                   ++  y+  +c +C++  pa+a+++ +++ + +e+ gvs  ++
  MMETSP1325-20131115|10432_1 23 IGLVEAYAP-WCGHCKKLKPAFAAAATQLA-QATELDGVSLKPV 64
                 556677888.*****************999.5688888887655 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 9.8e-05
   PF00578.16  15 gkkvslsdlkgkpvvLffypkdfcpvCttelpalaelyeefkkk..gvevi 63 
                   ++v l  + +++v+++f p   cp+C++ lp l++ ++e  ++  +v+++
  MMETSP1325-20131115|10432_1 463 WEEVVLGSWLQDVVIVYFDPD--CPHCQKMLPVLEKVAKEASQArpNVSFL 511
                  566777667566999999999..***************9988762344444 PP

>> PF13192.1  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0075       8.6       7      34 ..      30      57 ..      25      92 .. 0.83
   2 !    9.6   0.0   0.00062      0.71       5      27 ..     478     501 ..     475     518 .. 0.84
   3 ?   -1.4   0.0       1.6   1.8e+03      56      75 ..     548     566 ..     546     567 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0075
    PF13192.1  7 gpgCakCpkleeavkeaaeelgikaeve 34
                  p C +C+kl+ a+++aa++l    e++
  MMETSP1325-20131115|10432_1 30 APWCGHCKKLKPAFAAAATQLAQATELD 57
                 567****************997666555 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00062
    PF13192.1   5 v.lgpgCakCpkleeavkeaaeel 27 
                  v ++p C++C+k+  +++++a+e 
  MMETSP1325-20131115|10432_1 478 VyFDPDCPHCQKMLPVLEKVAKEA 501
                  4499*******9999999999875 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 1.6
    PF13192.1  56 ngkvvfsGkvpseeeirell 75 
                  +g v + G  p+++++++ l
  MMETSP1325-20131115|10432_1 548 DGYVAYHG-EPDVAQLETFL 566
                  99******.9*****99876 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.9   2.2e+03      18      35 ..      26      43 ..      20      60 .. 0.76
   2 !   15.8   0.0   8.6e-06    0.0097      16      54 ..     475     514 ..     464     524 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.9
    PF13462.1 18 ieyadltCphCarfheev 35
                 +e   + C hC++++  +
  MMETSP1325-20131115|10432_1 26 VEAYAPWCGHCKKLKPAF 43
                 5555677****9987765 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 8.6e-06
    PF13462.1  16 tvieyadltCphCarfheevekllekyidtg.kvkfiyre 54 
                  +vi y+d+ CphC ++   +ek+ +++ ++  +v+f + +
  MMETSP1325-20131115|10432_1 475 VVIVYFDPDCPHCQKMLPVLEKVAKEASQARpNVSFLMLD 514
                  69****************9999888874444567666655 PP

>> PF13728.1  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.013        14     120     190 ..      21      94 ..      11      97 .. 0.88
   2 ?    7.9   0.0    0.0016       1.8     125     149 ..     477     501 ..     472     510 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.013
    PF13728.1 120 keyGlfffyrsdcpycealapilqafaeky..gievlpVsvDGkglpelpnsrk.dtgqaqklgvkttPalvlv 190
                  +e Gl+  y   c  c++l+p   a a +     e+ +Vs+  ++l ++  + +  +++ +kl v  +P+l+++
  MMETSP1325-20131115|10432_1  21 NEIGLVEAYAPWCGHCKKLKPAFAAAATQLaqATELDGVSLKPVVLAKFDATHPkLRELGEKLSVDGFPSLFVF 94 
                  789*******************999988864478999************999885577889*********9975 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0016
    PF13728.1 125 fffyrsdcpycealapilqafaeky 149
                  ++ ++ dcp c+++ p+l+++a++ 
  MMETSP1325-20131115|10432_1 477 IVYFDPDCPHCQKMLPVLEKVAKEA 501
                  78899***************99875 PP

>> PF01323.15  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.51   5.8e+02      10      39 ..      33      66 ..      31     121 .. 0.68
   2 ?   12.3   0.0     7e-05      0.08       1      29 [.     475     507 ..     475     544 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.51
                 BHHHHHHHHCHHHHCCCC...-S.EEEEEEE-ST CS
   PF01323.15 10 CPyCylgkerleklaars...pd.vkvvlrpfel 39
                 C++C+  k+ + ++a++    ++   v l+p+ l
  MMETSP1325-20131115|10432_1 33 CGHCKKLKPAFAAAATQLaqaTElDGVSLKPVVL 66
                 8888888888888888773331111233344433 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 7e-05
                  CEEEEEBTTBHHHHHHHHCHHHHCCCC....-S CS
   PF01323.15   1 tvdeffDvlCPyCylgkerleklaars....pd 29 
                  +v+++fD  CP+C  + ++lek+a+      p+
  MMETSP1325-20131115|10432_1 475 VVIVYFDPDCPHCQKMLPVLEKVAKEAsqarPN 507
                  599********************9988554444 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.53     6e+02      32      55 ..      25      47 ..      14      62 .. 0.74
   2 ?   10.7   0.0   0.00023      0.26      31      76 ..     475     519 ..     459     548 .. 0.74

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.53
                 EEE---------IIIIIHHHHTHH CS
    PF08534.5 32 vlvfvpgafcptCsaehpylekla 55
                 ++ +++  +c+ C++  p ++  a
  MMETSP1325-20131115|10432_1 25 LVEAYAP-WCGHCKKLKPAFAAAA 47
                 6778999.*****99888544443 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00023
                  EEEE---------IIIIIHHHHTHHHH.HH----EEEEE-SS-HHH CS
    PF08534.5  31 vvlvfvpgafcptCsaehpyleklaklakekgvdvvavvaqndafv 76 
                  vv+v +   +cp C++ +p lek+ak+a++   +v +++ +  a  
  MMETSP1325-20131115|10432_1 475 VVIVYFDP-DCPHCQKMLPVLEKVAKEASQARPNVSFLMLDITAND 519
                  56666666.8**************9998887666666655544444 PP

>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.041        46       7      19 ..      31      43 ..      25      93 .. 0.84
   2 ?    6.8   0.0    0.0051       5.8       1      21 [.     476     496 ..     475     519 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.041
                 STSHHHHHHHHHH CS
   PF00462.19  7 ptCpyCkkakrlL 19
                 p+C++Ckk k ++
  MMETSP1325-20131115|10432_1 31 PWCGHCKKLKPAF 43
                 9*******99766 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0051
                  EEEEE-STSHHHHHHHHHHHH CS
   PF00462.19   1 vvvftkptCpyCkkakrlLde 21 
                  v+v+  p Cp+C+k+  +L++
  MMETSP1325-20131115|10432_1 476 VIVYFDPDCPHCQKMLPVLEK 496
                  677778********9988876 PP

>> PF05768.9  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.91     1e+03       9      52 ..      32      75 ..      30      84 .. 0.69
   2 ?    9.2   0.0    0.0012       1.3       2      41 ..     476     520 ..     475     567 .. 0.80

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.91
                 SSCHHHHHHHHCCC..CT--SEEEEEETTTSCCHHHHSSSS-SE CS
    PF05768.9  9 gChLCeqakelLkelkleeglelevidIdedevlearYgveipv 52
                  C+ C+++k + ++++ +     e   +  ++v  a+++ + p 
  MMETSP1325-20131115|10432_1 32 WCGHCKKLKPAFAAAATQLAQATELDGVSLKPVVLAKFDATHPK 75
                 6999**99999998777666333333455666666666666665 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0012
                  EEEEE-SSSCHHHHHHHHCCC..CT--.....SEEEEEETTTSCC CS
    PF05768.9   2 ltLyskpgChLCeqakelLkelkleeg.....lelevidIdedev 41 
                  ++ y  p C+ C+++  +L+++++e       ++    dI+ ++ 
  MMETSP1325-20131115|10432_1 476 VIVYFDPDCPHCQKMLPVLEKVAKEASqarpnVSFLMLDITANDP 520
                  688999**************9877777789999999999995554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.97u 0.37s 00:00:01.34 Elapsed: 00:00:00.56
# Mc/sec: 2597.48
//
Query:       MMETSP1325-20131115|10442_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.55    8.8   7.8       0.63    8.6   5.4    1.0  1  PF10265.4  Uncharacterized conserved protein (DUF2217)


Domain annotation for each model (and alignments):
>> PF10265.4  Uncharacterized conserved protein (DUF2217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   5.4   4.6e-05      0.63      46     194 ..      36     182 ..       3     202 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 4.6e-05
    PF10265.4  46 egeklitrrplsakkdkvssrrvrssssksndtlsvvsskasskssssssSlasvsarnSvsssaaansgsweaagaeeslettdttaenLylmgmelleevlrkwEqaltvrsrqaedeaaladvkseefaeklealLkrayrlqeef 194
                  eg+   +r ++ + ++   ++  +   +++++ l  v+  + ++     +   +  +r S +  a   s+  ++a   e  + +d   e+L+  g+ l   + + w  a++  ++ +  + ++ +++ +e ++kl a+ +r  +l  ++
  MMETSP1325-20131115|10442_1  36 EGQASQARCHARNAHS--HASDAQAHAESASQSLRAVNECQATQAIAEWRAAEDEYSRLSAAVEAGEGSAHQQQASSMEPRAPDDQLREQLGRTGKILQRAASEAWKFAISHLQQVEALNQRARQAEGHEEINKLRAMADRHMQLHLDV 182
                  2222223333222222..2334556666667777777777777777777777766777777776666544444444444447788889*******99999999***********************************99999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1100  (0.0804564); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.44s 00:00:01.02 Elapsed: 00:00:00.52
# Mc/sec: 949.33
//
Query:       MMETSP1325-20131115|10443_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-06   26.0   0.3      4e-05   23.5   0.0    2.2  2  PF13857.1  Ankyrin repeats (many copies)
    1.8e-05   24.1   0.7    0.00033   20.1   0.0    2.6  2  PF00023.25 Ankyrin repeat
      0.001   19.2   0.1      0.016   15.3   0.0    2.1  2  PF12796.2  Ankyrin repeats (3 copies)


Domain annotation for each model (and alignments):
>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   8.8e-09     4e-05       4      56 .]      30      83 ..      27      83 .. 0.94
   2 ?   -0.1   0.0      0.24   1.1e+03      18      24 ..     172     178 .]     153     178 .] 0.80

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 8.8e-09
    PF13857.1  4 hgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdg.ltaldlA 56
                 +++a+++ +d++g+ +Lh+   +g+ +++r L+ +ga+ +l+ + g  tal lA
  MMETSP1325-20131115|10443_1 30 RRAAVLDVQDQHGFVALHISSFRGHHNAARTLVTFGASRHLTSTVGkKTALNLA 83
                 4489999********************************************998 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.24
    PF13857.1  18 tpLhlAa 24 
                  +pLh+Aa
  MMETSP1325-20131115|10443_1 172 SPLHFAA 178
                  7888887 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   7.3e-08   0.00033       1      29 [.      41      69 ..      41      72 .. 0.93
   2 ?    1.5   0.0     0.058   2.7e+02       3      10 ..     171     178 .]     170     178 .] 0.87

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 7.3e-08
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTT CS
   PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdln 29
                 +Gf +LH+ ++rg+++ ++ L+  GA+ +
  MMETSP1325-20131115|10443_1 41 HGFVALHISSFRGHHNAARTLVTFGASRH 69
                 6999**********************976 PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.058
                  CBHHHHHH CS
   PF00023.25   3 fTPLHlAa 10 
                  ++PLH Aa
  MMETSP1325-20131115|10443_1 171 RSPLHFAA 178
                  68****98 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.6e-06     0.016      26      70 ..      38      87 ..      14     109 .. 0.77
   2 ?    2.0   0.0     0.052   2.4e+02      15      34 ..     151     178 .]     142     178 .] 0.46

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 3.6e-06
    PF12796.2 26 get....pLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrng 70
                 +++    +Lh+ + +g++++++ L+  ga+   ++   ++t+L lA   +
  MMETSP1325-20131115|10443_1 38 QDQhgfvALHISSFRGHHNAARTLVTFGASRHLTStVGKKTALNLAPTRN 87
                 34467889*********************998888899999999994444 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.052
    PF12796.2  15 lLlekgadvdl........getpLhlAa 34 
                   Ll++ga+  +         ++pLh Aa
  MMETSP1325-20131115|10443_1 151 SLLAEGATDGVfealddmgMRSPLHFAA 178
                  4444444444444444444444565554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 870.51
//
Query:       MMETSP1325-20131115|10445_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.07   12.8   0.0       0.07   12.8   0.0    1.2  1  PF01751.17 Toprim domain


Domain annotation for each model (and alignments):
>> PF01751.17  Toprim domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   5.1e-06      0.07       1      20 [.       5      28 ..       5      48 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 5.1e-06
                 EEEEESSHHHHHHHHTTTT....E CS
   PF01751.17  1 elvivEgpskaktikkalg....s 20
                 +l+++E+ps a +++++lg    +
  MMETSP1325-20131115|10445_1  5 VLMVAEKPSIATALAQVLGrghaR 28
                 59****************944442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10439_1  [L=392]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-23   81.5   0.7    1.6e-22   78.9   0.0    2.4  2  PF00226.26 DnaJ domain
      6e-20   69.8   1.1    1.2e-08   34.1   0.0    3.6  3  PF00023.25 Ankyrin repeat
      2e-18   66.2   0.9    4.5e-12   46.0   0.1    3.4  3  PF13637.1  Ankyrin repeats (many copies)
    1.3e-17   63.7   0.0    4.8e-17   61.9   0.0    2.0  1  PF12796.2  Ankyrin repeats (3 copies)
    4.2e-13   48.0   0.4    4.4e-05   23.2   0.0    3.8  3  PF13606.1  Ankyrin repeat
    7.6e-13   48.1   0.4      1e-06   28.6   0.0    3.2  3  PF13857.1  Ankyrin repeats (many copies)
    2.9e-11   42.7  18.9    1.2e-07   31.1   1.7    2.9  3  PF13414.1  TPR repeat
    2.5e-07   29.9  12.3      0.096   12.5   0.5    3.9  3  PF07719.12 Tetratricopeptide repeat
     0.0047   17.3   1.8       0.19   12.3   0.4    3.5  3  PF13428.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.011   15.4  14.4      0.023   14.5   1.4    3.5  3  PF13424.1  Tetratricopeptide repeat
      0.017   14.8   3.9      0.024   14.3   1.6    2.1  2  PF13371.1  Tetratricopeptide repeat
       0.17   12.5   8.5       0.45   11.1   1.4    3.4  3  PF13432.1  Tetratricopeptide repeat
       0.17   11.4  12.3        1.9    8.0   0.2    3.7  3  PF00515.23 Tetratricopeptide repeat
        0.2   11.8   6.1       0.71   10.1   0.3    3.8  4  PF13431.1  Tetratricopeptide repeat
       0.42   10.4   4.6        1.6    8.5   0.1    3.4  3  PF04212.13 MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.72   6.6e+02      24      38 ..     231     245 ..     229     259 .. 0.76
   2 !   78.9   0.0   1.7e-25   1.6e-22       1      64 []     301     367 ..     301     367 .. 0.97

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.72
                  HHHHT-TTT--SCCH CS
   PF00226.26  24 lalkyHPDknkddee 38 
                   alk+ PD ++  e+
  MMETSP1325-20131115|10439_1 231 AALKLKPDYHQAREQ 245
                  699*****9988873 PP

  == domain 2    score: 78.9 bits;  conditional E-value: 1.7e-25
                  HHHHHTT--TT--HHHHHHHHHHHHHHT-TTT--SCC...HHHHHHHHHHHHHHHHHTSHHHHHHHH CS
   PF00226.26   1 dyYeiLgvpkdasdeeIkkaYrklalkyHPDknkdde...eeaeekfkeineAyevLsdpekraeyd 64 
                  ++Y+iLgv+k+as++e+kkaYr  +l++HPDk+   +    +a+ +f+++neA evLs+p+kr+ yd
  MMETSP1325-20131115|10439_1 301 THYDILGVEKTASASELKKAYRTQCLQWHPDKHATTPegrHRAHFMFQRVNEANEVLSNPTKRSAYD 367
                  69*******************************99999*98999**********************8 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0     0.007       6.4      14      27 ..      31      44 ..      17      47 .. 0.86
   2 !   25.5   0.3   7.4e-09   6.7e-06       4      30 ..      72      98 ..      71     100 .. 0.96
   3 !   34.1   0.0   1.3e-11   1.2e-08       2      33 .]     104     135 ..     103     135 .. 0.98

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.007
                 HHHHHHHHHHTTSS CS
   PF00023.25 14 nlevvklLlsqGAd 27
                 +l+v+k Ll++GAd
  MMETSP1325-20131115|10439_1 31 DLRVCKALLGNGAD 44
                 789**********9 PP

  == domain 2    score: 25.5 bits;  conditional E-value: 7.4e-09
                 BHHHHHHHTTHHHHHHHHHHTTSSTTH CS
   PF00023.25  4 TPLHlAalrgnlevvklLlsqGAdlna 30
                 +PLH+A+++g+   ++lL+++  ++na
  MMETSP1325-20131115|10439_1 72 SPLHYAVKHGHDALCQLLIQNKSNINA 98
                 6*************************9 PP

  == domain 3    score: 34.1 bits;  conditional E-value: 1.3e-11
                  SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                  G+TPLH+Aa+++ ++ +klL+++GA ++a+d+
  MMETSP1325-20131115|10439_1 104 GRTPLHYAAQYNKPKLAKLLVQKGAFVDAKDN 135
                  9*****************************97 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.26   2.4e+02       5      26 ..      18      44 ..      17      52 .. 0.80
   2 !   46.0   0.1   4.9e-15   4.5e-12       3      54 .]      72     124 ..      71     124 .. 0.97
   3 !   26.6   0.0     6e-09   5.4e-06       1      41 [.     104     144 ..     104     146 .. 0.96

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.26
    PF13637.1  5 Lhyaai.....sgrlelvklLlekgid 26
                 L++aa       ++l+++k Ll +g+d
  MMETSP1325-20131115|10439_1 18 LRQAADtesftGSDLRVCKALLGNGAD 44
                 566666666667889**********99 PP

  == domain 2    score: 46.0 bits;  conditional E-value: 4.9e-15
    PF13637.1   3 taLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklLl 54 
                  ++Lhya+++g+  l++lL++++ +in++ +  G+t+Lh+Aa+++ ++++klL+
  MMETSP1325-20131115|10439_1  72 SPLHYAVKHGHDALCQLLIQNKSNINALePTLGRTPLHYAAQYNKPKLAKLLV 124
                  79*************************************************96 PP

  == domain 3    score: 26.6 bits;  conditional E-value: 6e-09
    PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiA 41 
                  g+t+Lhyaa+++  +l+klL++kg+ ++++d++ ++aL iA
  MMETSP1325-20131115|10439_1 104 GRTPLHYAAQYNKPKLAKLLVQKGAFVDAKDNNSDSALEIA 144
                  69***********************************9887 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.0   5.3e-20   4.8e-17       9      89 .]      31     134 ..      18     134 .. 0.89

  Alignments for each domain:
  == domain 1    score: 61.9 bits;  conditional E-value: 5.3e-20
    PF12796.2   9 nlelvklLlekgadvdl......get................pLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklLlekgadvnlrd 89 
                  +l ++k Ll +gad  +      ge+                pLh+A+++g+ + ++lL++++ ++na +   g+tpLh+A+++++ +l+klL++kga v+++d
  MMETSP1325-20131115|10439_1  31 DLRVCKALLGNGADASFmghynsGEEhgelkpfagvdelsasPLHYAVKHGHDALCQLLIQNKSNINALEpTLGRTPLHYAAQYNKPKLAKLLVQKGAFVDAKD 134
                  68899*******999999876663337888888888889999**************************99****************************999886 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.75   6.8e+02      15      27 ..      32      44 ..      17      46 .. 0.83
   2 !   18.9   0.2   1.1e-06     0.001       4      30 .]      72      98 ..      71      98 .. 0.96
   3 !   23.2   0.0   4.8e-08   4.4e-05       2      26 ..     104     128 ..     103     132 .. 0.95

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.75
    PF13606.1 15 ielveaLlengad 27
                 + +++aLl ngad
  MMETSP1325-20131115|10439_1 32 LRVCKALLGNGAD 44
                 5799*******99 PP

  == domain 2    score: 18.9 bits;  conditional E-value: 1.1e-06
    PF13606.1  4 TpLhlAasngrielveaLlengadina 30
                 +pLh+A+++g+ +l+++L++n  +ina
  MMETSP1325-20131115|10439_1 72 SPLHYAVKHGHDALCQLLIQNKSNINA 98
                 69***********************96 PP

  == domain 3    score: 23.2 bits;  conditional E-value: 4.8e-08
    PF13606.1   2 GnTpLhlAasngrielveaLlenga 26 
                  G+TpLh+Aa++++++l+++L+++ga
  MMETSP1325-20131115|10439_1 104 GRTPLHYAAQYNKPKLAKLLVQKGA 128
                  9**********************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       2.3   2.1e+03      28      42 ..      31      45 ..      28      46 .. 0.85
   2 !   16.1   0.1   9.8e-06     0.009      13      45 ..      67      99 ..      56     103 .. 0.87
   3 !   28.6   0.0   1.1e-09     1e-06      16      56 .]     104     144 ..      98     144 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 2.3
    PF13857.1 28 alevvrlLlapgadl 42
                 +l v++ Ll +gad+
  MMETSP1325-20131115|10439_1 31 DLRVCKALLGNGADA 45
                 67899****999996 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 9.8e-06
    PF13857.1 13 deggntpLhlAakggalevvrlLlapgadlnlr 45
                 de + +pLh+A+k+g+  +++lL+++ +++n+ 
  MMETSP1325-20131115|10439_1 67 DELSASPLHYAVKHGHDALCQLLIQNKSNINAL 99
                 666779******************999999986 PP

  == domain 3    score: 28.6 bits;  conditional E-value: 1.1e-09
    PF13857.1  16 gntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                  g+tpLh+Aa ++ + +++lL+++ga  +++d++ ++al++A
  MMETSP1325-20131115|10439_1 104 GRTPLHYAAQYNKPKLAKLLVQKGAFVDAKDNNSDSALEIA 144
                  88**************************************9 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         3   2.8e+03      43      59 ..     119     134 ..     106     146 .. 0.55
   2 !   31.1   1.7   1.3e-10   1.2e-07       5      67 ..     165     235 ..     163     235 .. 0.85
   3 !   25.1   6.0     1e-08   9.2e-06       2      67 ..     205     269 ..     204     271 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 3
    PF13414.1  43 lAlaylklgkdyeeAle 59 
                  lA+++ ++g  +++A +
  MMETSP1325-20131115|10439_1 119 LAKLLVQKG-AFVDAKD 134
                  566666666.4444433 PP

  == domain 2    score: 31.1 bits;  conditional E-value: 1.3e-10
    PF13414.1   5 alkelGnalfkegdydeAieayekAlel......dpnnae...lyynlAlaylklgkdyeeAledyekAlel 67 
                   + +++n+ +k+gdyd A++ y kA ++      +p+ a+   l+yn A a +   +  + Ale +e Al+l
  MMETSP1325-20131115|10439_1 165 NYTNRANKMYKAGDYDIACDVYAKAFDMlvqvkpQPSEANqatLHYNYARAAICVRQ-HVLALEQCEAALKL 235
                  599***********************98555544355444555************95.69**********97 PP

  == domain 3    score: 25.1 bits;  conditional E-value: 1e-08
    PF13414.1   2 nAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAlel 67 
                  +A  +++ + a++  +++  A+e++e Al+l p++ ++  ++A++++ l  +y+ A++dy+   +l
  MMETSP1325-20131115|10439_1 205 QATLHYNYARAAICVRQHVLALEQCEAALKLKPDYHQAREQRAKCHMALY-NYDMAIDDYKALCKL 269
                  6889999*******************************************.7********977665 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.1    0.0003      0.27       4      28 ..     166     190 ..     165     192 .. 0.92
   2 !   12.2   0.6   0.00013      0.11       1      34 []     206     239 ..     206     239 .. 0.94
   3 !   12.5   0.5   0.00011     0.096       6      31 ..     245     270 ..     240     272 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.0003
                  HHHHHHHHHHTT-HHHHHHHHHHHH CS
   PF07719.12   4 lynlGlayyklgdyeeAleafekAl 28 
                  + n+++  yk+gdy+ A + + kA 
  MMETSP1325-20131115|10439_1 166 YTNRANKMYKAGDYDIACDVYAKAF 190
                  679********************95 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 0.00013
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
   PF07719.12   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                  a ++yn ++a++  +++  Ale +e Al+l P++
  MMETSP1325-20131115|10439_1 206 ATLHYNYARAAICVRQHVLALEQCEAALKLKPDY 239
                  568*****************************85 PP

  == domain 3    score: 12.5 bits;  conditional E-value: 0.00011
                  HHHHHHHHTT-HHHHHHHHHHHHHH- CS
   PF07719.12   6 nlGlayyklgdyeeAleafekAleld 31 
                  ++++++++l +y+ A+++++   +l+
  MMETSP1325-20131115|10439_1 245 QRAKCHMALYNYDMAIDDYKALCKLA 270
                  79*******************99996 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.49   4.5e+02       4      28 ..     166     190 ..     163     207 .. 0.77
   2 !   12.3   0.4    0.0002      0.19       3      43 ..     208     248 ..     205     249 .. 0.93
   3 ?    2.4   0.0      0.32   2.9e+02       3      30 ..     242     269 ..     240     281 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.49
    PF13428.1   4 llalarallalGdpdeAiallrral 28 
                  +  +a+ +  +Gd+d A +++ +a 
  MMETSP1325-20131115|10439_1 166 YTNRANKMYKAGDYDIACDVYAKAF 190
                  5567788899**********99984 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 0.0002
    PF13428.1   3 allalarallalGdpdeAiallrralalaPddaealllLar 43 
                  +++ +ara +   ++  A++++++al+l Pd  +a+ + a+
  MMETSP1325-20131115|10439_1 208 LHYNYARAAICVRQHVLALEQCEAALKLKPDYHQAREQRAK 248
                  6789********************************99886 PP

  == domain 3    score: 2.4 bits;  conditional E-value: 0.32
    PF13428.1   3 allalarallalGdpdeAiallrralal 30 
                  a+ ++a  ++al ++d Ai+ ++++++l
  MMETSP1325-20131115|10439_1 242 AREQRAKCHMALYNYDMAIDDYKALCKL 269
                  77899***************99999875 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1       1.3   1.1e+03      42      71 ..     116     146 ..     108     148 .. 0.66
   2 ?   14.5   1.4   2.5e-05     0.023       8      75 ..     166     235 ..     159     235 .. 0.91
   3 ?    9.8   5.2   0.00074      0.67       4      77 ..     205     271 ..     202     272 .. 0.93

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 1.3
    PF13424.1  42 hpdtaralnnlanlylalg.dydeAleylek 71 
                   p +a++l + +    a+  + d+Ale  e+
  MMETSP1325-20131115|10439_1 116 KPKLAKLLVQKGAFVDAKDnNSDSALEIAER 146
                  5667777777776666655145668877776 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 2.5e-05
    PF13424.1   8 lnnlalvlrrlgdydeAlelyekalellrelgd..dhpdtaralnnlanlylalgdydeAleylekAlei 75 
                  ++n a+  ++ gdyd A + y ka ++l ++++    ++ a++ +n+a++     ++  Ale  e Al++
  MMETSP1325-20131115|10439_1 166 YTNRANKMYKAGDYDIACDVYAKAFDMLVQVKPqpSEANQATLHYNYARAAICVRQHVLALEQCEAALKL 235
                  789999999******************9999875568899**********99999999999999999986 PP

  == domain 3    score: 9.8 bits;  conditional E-value: 0.00074
    PF13424.1   4 latilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAleiae 77 
                   at+++n+a +    +++  Ale +e al+l        pd+  a  + a +++al +yd A++ ++  +++a+
  MMETSP1325-20131115|10439_1 205 QATLHYNYARAAICVRQHVLALEQCEAALKLK-------PDYHQAREQRAKCHMALYNYDMAIDDYKALCKLAS 271
                  699***************************97.......788889**********************9999875 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.8   4.3e+03      10      21 ..     136     147 ..     132     149 .. 0.78
   2 ?   14.3   1.6   2.6e-05     0.024       7      60 ..     218     271 ..     213     297 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 4.8
    PF13371.1  10 dferALavverl 21 
                    ++AL+++erl
  MMETSP1325-20131115|10439_1 136 NSDSALEIAERL 147
                  568899999987 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 2.6e-05
    PF13371.1   7 reedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcp 60 
                    +++  AL+ +e  l l+Pd ++ r  r+ +++ l ++  A++d+ a  +l+ 
  MMETSP1325-20131115|10439_1 218 CVRQHVLALEQCEAALKLKPDYHQAREQRAKCHMALYNYDMAIDDYKALCKLAS 271
                  5678999**************************************998876655 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       2.5   2.3e+03      19      36 ..      98     115 ..      96     146 .. 0.74
   2 ?    3.9   0.2     0.086        78       3      29 ..     169     199 ..     167     217 .. 0.73
   3 ?   11.1   1.4   0.00049      0.45       3      62 ..     212     271 ..     210     274 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 2.5
    PF13432.1  19 aleaalalaPeaaealll 36 
                  ale  l + P+++ a+++
  MMETSP1325-20131115|10439_1  98 ALEPTLGRTPLHYAAQYN 115
                  677777778888888875 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.086
    PF13432.1   3 lArallraGdydeAlaaleaalala....Pe 29 
                  +A+  ++aGdyd A +++ +a +      P+
  MMETSP1325-20131115|10439_1 169 RANKMYKAGDYDIACDVYAKAFDMLvqvkPQ 199
                  79999*********99999998888777755 PP

  == domain 3    score: 11.1 bits;  conditional E-value: 0.00049
    PF13432.1   3 lArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaP 62 
                  +Ara++  ++   Al++ eaal+l P++ +a+  +a ++++l ++d A+  ++a+ +la+
  MMETSP1325-20131115|10439_1 212 YARAAICVRQHVLALEQCEAALKLKPDYHQAREQRAKCHMALYNYDMAIDDYKALCKLAS 271
                  5666666677778*****************************999999988888877765 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.4      0.27   2.4e+02       4      20 ..     166     182 ..     165     191 .. 0.83
   2 ?    8.0   0.2    0.0021       1.9      16      34 .]     221     239 ..     207     239 .. 0.89
   3 ?    7.8   0.6    0.0025       2.3       6      25 ..     245     264 ..     241     271 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.27
                  HHHHHHHHHHTT-HHHH CS
   PF00515.23   4 lynlGnaylklgkydeA 20 
                  + n++n  +k g+yd A
  MMETSP1325-20131115|10439_1 166 YTNRANKMYKAGDYDIA 182
                  88999999******977 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0021
                  -HHHHHHHHHHHHHHHTTH CS
   PF00515.23  16 kydeAleyyekALelnPnn 34 
                  ++  Ale +e AL+l P++
  MMETSP1325-20131115|10439_1 221 QHVLALEQCEAALKLKPDY 239
                  6678*************97 PP

  == domain 3    score: 7.8 bits;  conditional E-value: 0.0025
                  HHHHHHHHTT-HHHHHHHHH CS
   PF00515.23   6 nlGnaylklgkydeAleyye 25 
                  +++ +++ l +yd A+++y+
  MMETSP1325-20131115|10439_1 245 QRAKCHMALYNYDMAIDDYK 264
                  5899999999*********8 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.26   2.4e+02      13      30 ..     163     180 ..     155     183 .. 0.87
   2 ?   -1.7   0.0       4.5   4.1e+03      12      22 ..     205     215 ..     202     225 .. 0.81
   3 ?   10.1   0.3   0.00078      0.71       2      33 ..     229     260 ..     228     261 .. 0.95
   4 ?   -2.7   0.0       9.7   8.9e+03      11      28 ..     282     300 ..     279     302 .. 0.65

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.26
    PF13431.1  13 adaynnLAelllnnGdle 30 
                  +++y+n+A+  +++Gd++
  MMETSP1325-20131115|10439_1 163 FWNYTNRANKMYKAGDYD 180
                  67899***********98 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 4.5
    PF13431.1  12 nadaynnLAel 22 
                   a +++n+A++
  MMETSP1325-20131115|10439_1 205 QATLHYNYARA 215
                  57889999986 PP

  == domain 3    score: 10.1 bits;  conditional E-value: 0.00078
    PF13431.1   2 yekaleldPnnadaynnLAelllnnGdleeAe 33 
                  +e al+l P++++a+ ++A+++ ++ ++++A+
  MMETSP1325-20131115|10439_1 229 CEAALKLKPDYHQAREQRAKCHMALYNYDMAI 260
                  799**************************997 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 9.7
    PF13431.1  11 nnadayn.nLAelllnnGd 28 
                  +n++++  + Ae+l+++++
  MMETSP1325-20131115|10439_1 282 KNVPSWErQQAEALHAKNK 300
                  5666665566888888776 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0017       1.6      14      44 ..     172     202 ..     165     214 .. 0.78
   2 ?    1.0   0.1      0.39   3.6e+02      16      54 ..     244     282 ..     240     284 .. 0.81
   3 ?   -0.8   0.0       1.4   1.3e+03      42      58 ..     312     328 ..     305     329 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0017
                  HHHHTT-HHHHHHHHHHHHHHHHHHHHHCTT CS
   PF04212.13  14 eaDeagkyeeAlelYkeAlelLlqalkyepn 44 
                  +  +ag+y+ A++ Y +A + L+q+  ++++
  MMETSP1325-20131115|10439_1 172 KMYKAGDYDIACDVYAKAFDMLVQVKPQPSE 202
                  55579*******************9655544 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.39
                  HHTT-HHHHHHHHHHHHHHHHHHHHHCTTHHCHHHHHHH CS
   PF04212.13  16 DeagkyeeAlelYkeAlelLlqalkyepnperrealrqk 54 
                  ++  k   Al +Y  A++ +  ++k  ++++  + l++k
  MMETSP1325-20131115|10439_1 244 EQRAKCHMALYNYDMAIDDYKALCKLASSGTAGDSLDAK 282
                  6666777899*********99999999888877666665 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 1.4
                  CTTHHCHHHHHHHHHHH CS
   PF04212.13  42 epnperrealrqkieey 58 
                   + +e ++a+r+++ ++
  MMETSP1325-20131115|10439_1 312 ASASELKKAYRTQCLQW 328
                  478899999***99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.77u 0.36s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 1841.91
//
Query:       MMETSP1325-20131115|10435_1  [L=761]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-63  213.2   0.0    4.9e-63  212.5   0.0    1.4  1  PF00069.20 Protein kinase domain
    1.1e-33  116.3   0.0    6.5e-33  113.8   0.0    2.0  1  PF07714.12 Protein tyrosine kinase
    0.00028   20.9   4.3     0.0013   18.8   3.0    2.1  1  PF00433.19 Protein kinase C terminal domain
  ------ inclusion threshold ------
      0.069   12.6   0.5       0.14   11.6   0.3    1.5  1  PF13719.1  zinc-ribbon domain


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.5   0.0   1.4e-66   4.9e-63       1     253 [.     347     612 ..     347     624 .. 0.93

  Alignments for each domain:
  == domain 1    score: 212.5 bits;  conditional E-value: 1.4e-66
                  EEEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE....................CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHH CS
   PF00069.20   1 yelleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.ElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl....................eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaee 253
                  ++l+  lG+G+fGkV+++k k+tgk +A+K+++k+e +++ + ++++ E  il  ++Hp+iv+l  +f++ ++ly+v+++v+ggd+f++++k g+l+e  ++ ++++i+ +l++lH+  i++rDLKpeN+L+d++g+ k++DFGl++ +                      +   +++++gt++YmAPE+ll ++++tk+vD+W lG++++e+ltg+ pf+g    +++ +++   + +   d +      +++++li++ll kdp++Rl a++
  MMETSP1325-20131115|10435_1 347 FQLMAVLGRGGFGKVMQVKFKQTGKVYAMKVFHKSELRRRRQVERTKtERDILSVVKHPFIVQLSFAFQNTNKLYMVMDFVQGGDFFTFMRKFGRLRESWVQLYVTEIAMALQHLHEFDIVYRDLKPENVLMDSEGHAKLTDFGLSRYFetrpalaedeqkkgadgsgaDGNALVTRSYCGTEQYMAPEMLL-QRGHTKAVDWWCLGLLMHEMLTGRHPFQGG---THYDTLRAMVTAEPLVDPRVM----PTARSLIRRLLIKDPRRRLGAQR 612
                  578899*****************************9888877776667***************************************************************************************************99*****************998889999*****************.******************************...777777777777777776655....99*****************9764 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.8   0.0   1.9e-36   6.5e-33       2     249 ..     348     607 ..     347     612 .. 0.82

  Alignments for each domain:
  == domain 1    score: 113.8 bits;  conditional E-value: 1.9e-36
                  EEEEEE-------EEEEEEETTTTSSEEEEEEEEECTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEES..........TTTSCE............EESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS CS
   PF07714.12   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardi..........ekddyy............kkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeR 249
                  +l+  lG+G fGkV++ + k++ +   +kV  K+     ++++ e+  +e +i++ +khp iv+l  ++ ++++l++v+++v+gGd+ +f+rk    +l+ +++  ++++ia ++++L++ ++v rdL   NvL+++e + k++DfGL+r            +                  ++++     ++mapE+l ++  t++ D W  G l++E++t g++p++g ++ ++l+++ + + l  p+ +p +  +l+++ + ++p++R
  MMETSP1325-20131115|10435_1 348 QLMAVLGRGGFGKVMQVKFKQTGKVYAMKVFHKSE--LRRRRQVERTKTERDILSVVKHPFIVQLSFAFQNTNKLYMVMDFVQGGDFFTFMRKF--GRLRESWVQLYVTEIAMALQHLHEFDIVYRDLKPENVLMDSEGHAKLTDFGLSRYFetrpalaedeQ----KkgadgsgadgnaLVTRSYCGTEQYMAPEMLLQRGHTKAVDWWCLGLLMHEMLT-GRHPFQGGTHYDTLRAMVTAEPLVDPRVMP-TARSLIRRLLIKDPRRR 607
                  56789***************555555555555544..455666789999********************************************8..9*****************************************************9988887754331....22333322111113333333456899****************************.99***************9999999999555.45667777666666666 PP

>> PF00433.19  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   3.0   3.8e-07    0.0013       3      46 ..     646     713 ..     644     715 .. 0.86

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 3.8e-07
                  SSTTXXTCCTCCCCTS-SS---..........................--HHHHTT--GGGGTT--EE CS
   PF00433.19   3 ksptDTsNFDpeFteesvtdtpi........................gadsspltsskqenFrGFtYv 46 
                  ++++D  NF+++Ft+e + d+                          +   s   + + + F GF+Yv
  MMETSP1325-20131115|10435_1 646 SNEEDIGNFETTFTREAPVDSVVdtskdankdgkggllggffkfgskKHAASSPKEKDPNDFEGFSYV 713
                  79********************9********************977755555555556669******8 PP

>> PF13719.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3     4e-05      0.14      13      33 ..     125     145 ..     121     147 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4e-05
    PF13719.1  13 eiddekippkgrkvrCskCgh 33 
                  + + +++++++r+++C++Cg+
  MMETSP1325-20131115|10435_1 125 RAAQKQLKESKRWATCKHCGE 145
                  566789*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (761 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       499  (0.036498); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.20u 0.33s 00:00:01.53 Elapsed: 00:00:00.54
# Mc/sec: 3377.09
//
Query:       MMETSP1325-20131115|10448_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.47    9.9   4.7       0.54    9.7   3.3    1.0  1  PF12114.3 Period protein 2/3C-terminal region
        3.7    7.4   7.3        4.2    7.3   5.1    1.1  1  PF06112.6 Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF12114.3  Period protein 2/3C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.3   7.9e-05      0.54      29      88 ..      13      77 ..       3      82 .. 0.55

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 7.9e-05
    PF12114.3 29 sgsgsskssslgsgSnkgsssg..sssgssnsskyfgssdysseksekakksqdee...eeeqfi 88
                 s+ +  + +  +sg ++++ s+   ss s+++   +gss yss ks  +k+++++e   +  ++i
  MMETSP1325-20131115|10448_1 13 SEVETEGLNRFTSGTMSSDYSSyiPSSFSFSKVSSLGSSLYSSSKSSATKEAKSKEaprDAPTII 77
                 33333334448899999999998844444444444555555666666666655555333334445 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   5.1   0.00061       4.2      95     140 ..      23      68 ..       3      74 .. 0.62

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00061
    PF06112.6  95 ssssasgvpggaa..lSsssvsalsSgpsslsssssesssdasagdta 140
                   +s++++    ++  +Ss s+s +sS  ssl sss+ s++   a++++
  MMETSP1325-20131115|10448_1  23 FTSGTMSSD-YSSyiPSSFSFSKVSSLGSSLYSSSKSSAT-KEAKSKE 68 
                  333333332.2336799999******99999999544444.4443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.60
# Mc/sec: 343.48
//
Query:       MMETSP1325-20131115|10444_1  [L=434]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.6e-65  218.7   0.2    9.5e-55  185.3   0.2    3.5  2  PF05691.7 Raffinose synthase or seed inhibition protein Sip1


Domain annotation for each model (and alignments):
>> PF05691.7  Raffinose synthase or seed inhibition protein Sip1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.3   0.2     7e-59   9.5e-55     447     617 ..       1     181 [.       1     204 [. 0.86
   2 !   27.0   0.0   5.1e-11     7e-07     629     730 ..     264     395 ..     251     401 .. 0.74

  Alignments for each domain:
  == domain 1    score: 185.3 bits;  conditional E-value: 7e-59
    PF05691.7 447 lgrvgddfylrdPagdpngvfwlqgvhivhvaynslflGeliqPdWdmfqslhpaaefhaasraisGgpiyvsdkvGkhnfdllkklvlpdGsilraelyalPtrdclfkdP......lrdgk............sllkiwnlnkytGvvGvfnCqGagWskeekknkifseasktltgsvraedveld 617
                  ++rv+ddfy+rd  +        ++ hi+ va+ns+f+Ge+++ dWdmf+s+h aa  haa+ra++G+++y sdk+G+h+fdll++lv+pdGs++ a  +++Pt dclf+dP      l   +            s lkiwn n+++ vv +fn +G++W+++ +  ++f+  + ++t++++ +d+ + 
  MMETSP1325-20131115|10444_1   1 MARVSDDFYPRDKPS--------HTYHIAAVAFNSVFMGEIVNADWDMFNSKHDAAGIHAAARAVGGCAVYTSDKPGEHDFDLLRRLVFPDGSVPVALRPGRPTVDCLFSDPtgyadpLASTSappkvaktpaapSALKIWNTNRFGYVVAAFNLRGSAWDRRRRSYQTFESEVAPVTAKISMSDIPAW 181
                  68***********99........9*************************************************************************************9983322222221112222222333378************************************************9644 PP

  == domain 2    score: 27.0 bits;  conditional E-value: 5.1e-11
    PF05691.7 629 eevvvylkkseellllklksesleltleplefellsvsPvkklvs..........s.........svkfaPiGlvnmfnsgGavqeleveee...........kasvklevk.GaGrflaysskkPkkckvdg 730
                    vv y++ s+el ll+ +++++ + l ++++e++++s +++lv+          s         ++++aPiGl nm+nsgG+v + +               +a++++++  GaG+f  ++s++P++++v+ 
  MMETSP1325-20131115|10444_1 264 RMVVAYSHVSGELRLLR-EGDEVGVELGSRDYEVVTMSEITSLVNpdshassstgSsaqqtasmiELSWAPIGLGNMLNSGGTVLSYKAAVApasngppapgsRAQASVGLMgGAGEFVGWASEAPVSVTVEF 395
                  44567999999999999.599999999999999999999998864222222222202222222224789***************987776558899*****99777777765278*************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.33s 00:00:01.09 Elapsed: 00:00:00.49
# Mc/sec: 2122.49
//
Query:       MMETSP1325-20131115|10451_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|10450_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 537.11
//
Query:       MMETSP1325-20131115|10447_1  [L=905]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-22   78.6   0.3    3.9e-22   77.1   0.2    1.8  1  PF00240.18 Ubiquitin family
    1.5e-10   40.4   0.1      3e-10   39.5   0.1    1.5  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
      0.038   13.6   0.1       0.15   11.7   0.0    2.0  2  PF12644.2  Protein of unknown function (DUF3782)


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   0.2   8.6e-26   3.9e-22       1      69 []     282     350 ..     282     350 .. 0.98

  Alignments for each domain:
  == domain 1    score: 77.1 bits;  conditional E-value: 8.6e-26
                  EESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
   PF00240.18   1 ktlsgktitlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69 
                  k l+gk++++ v+  dt+++lKe i+++egip+dqqrL++ G++LeD+ t+++yn+++ s++h+vlrlr
  MMETSP1325-20131115|10447_1 282 KLLTGKVFQVMVNNHDTIATLKENIQDQEGIPPDQQRLVHGGMQLEDGYTVQDYNLKETSIIHCVLRLR 350
                  7899***************************************************************87 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.1   6.7e-14     3e-10       3      71 ..     279     346 ..     277     347 .. 0.95

  Alignments for each domain:
  == domain 1    score: 39.5 bits;  conditional E-value: 6.7e-14
                  EEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE CS
    PF11976.3   3 ivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvv 71 
                  + +k  +gk +++ V++++t+++L+e  ++++gip+ +q+rL+  G +L++  tv+d+++++ ++i+ v
  MMETSP1325-20131115|10447_1 279 LSIKLLTGKVFQVMVNNHDTIATLKENIQDQEGIPP-DQQRLVHGGMQLEDGYTVQDYNLKETSIIHCV 346
                  6688899*****************************.*****************************987 PP

>> PF12644.2  Protein of unknown function (DUF3782)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.4e-05      0.15       9      59 ..     298     367 ..     281     370 .. 0.77
   2 ?   -2.0   0.1      0.64   2.9e+03       8      22 ..     492     506 ..     483     563 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.4e-05
    PF12644.2   9 kafatkedLkelearatkedvkrle....................ayinalgarwgvvsEdvfrqGvrell 59 
                   +  +ke ++  e   +++++++++                     + + l  r g++ E +fr+G+ el+
  MMETSP1325-20131115|10447_1 298 TIATLKENIQDQEG-IPPDQQRLVHggmqledgytvqdynlketsIIHCVLRLRGGMMHESSFRNGFAELM 367
                  55556666665544.66666666667777777777777777778788888999****************96 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.64
    PF12644.2   8 dkafatkedLkelea 22 
                  +++ a +  L+ l a
  MMETSP1325-20131115|10447_1 492 EEIAAAQAHLEALQA 506
                  334444444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (905 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.32u 0.38s 00:00:01.70 Elapsed: 00:00:00.59
# Mc/sec: 3675.77
//
Query:       MMETSP1325-20131115|10452_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 454.82
//
Query:       MMETSP1325-20131115|10453_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-15   55.8   0.1    3.2e-15   55.3   0.1    1.2  1  PF04542.9 Sigma-70 region 2
  ------ inclusion threshold ------
      0.043   12.8   0.0      0.053   12.5   0.0    1.1  1  PF03258.9 Baculovirus FP protein


Domain annotation for each model (and alignments):
>> PF04542.9  Sigma-70 region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.1   4.7e-19   3.2e-15      25      69 ..       4      48 ..       2      49 .. 0.96

  Alignments for each domain:
  == domain 1    score: 55.3 bits;  conditional E-value: 4.7e-19
                 HHHH------HHHHHTTSS--HHHHHHHHHHHH---HHHHHHTS- CS
    PF04542.9 25 DlvQeaflrllraverfdpergvkfsawlltiirnaildalrrrr 69
                 Dl+Qe+ l+l+ra+e+fd++rg +fs+++ t+ir ++l++l+r r
  MMETSP1325-20131115|10453_1  4 DLIQEGTLGLIRAAEKFDADRGNRFSTYASTWIRATVLNYLKRTR 48
                 *****************************************9975 PP

>> PF03258.9  Baculovirus FP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.7e-06     0.053       8      46 ..      36      73 ..      30      75 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.7e-06
    PF03258.9  8 invsilkslikeeidrnvsdnikllnsklkkleedklnd 46
                 i  ++l+ l +++i + v d+++ l +k++k+e+d+ln+
  MMETSP1325-20131115|10453_1 36 IRATVLNYLKRTRIIH-VPDEVQWLGNKIRKMEKDNLNE 73
                 6778889999999988.********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 314.01
//
Query:       MMETSP1325-20131115|10454_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   12.8   0.0       0.11   12.2   0.0    1.4  1  PF10274.4 Parkin co-regulated protein


Domain annotation for each model (and alignments):
>> PF10274.4  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   8.4e-06      0.11      80     121 ..      84     124 ..      59     131 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 8.4e-06
    PF10274.4  80 klilplkeaLntrdeeviesaLkvlqklvkaseligeaLvpy 121
                  k++ p+ +  ++++++++ + Lk+l++l++as+ i ++L py
  MMETSP1325-20131115|10454_1  84 KVVAPVTTS-SNQQMDILGKKLKILERLIVASRAIADSLDPY 124
                  566666655.567899*************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 703.61
//
Query:       MMETSP1325-20131115|10456_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   10.8   0.9       0.16   10.8   0.6    1.0  1  PF11200.3 Protein of unknown function (DUF2981)


Domain annotation for each model (and alignments):
>> PF11200.3  Protein of unknown function (DUF2981)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.6   1.2e-05      0.16     168     202 ..      17      51 ..       8      63 .] 0.76

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.2e-05
    PF11200.3 168 rlqdknsgdttgdttkdtsgnvdgtanynaydnpd 202
                   ++d+ + d++g ++ d++g++dgt+   a    d
  MMETSP1325-20131115|10456_1  17 AVGDEATDDVAGSSNSDGAGGTDGTVASAAEASVD 51 
                  57899999****************98877654444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|10455_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-06   27.5  13.2      3e-06   26.8   9.2    1.4  1  PF03798.11 TLC domain
  ------ inclusion threshold ------
        4.5    7.0   6.8       0.34   10.6   0.6    2.0  2  PF10066.4  Uncharacterized conserved protein (DUF2304)


Domain annotation for each model (and alignments):
>> PF03798.11  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   9.2   4.4e-10     3e-06      18     197 ..      50     248 ..      33     249 .. 0.70

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 4.4e-10
   PF03798.11  18 aglivlsssp...elwegy.perivgathfllkayylfalgYflyd.llvlllyekkrkdfalmvlHHvitlfllllsyv.rglgryglavlllhelstpflslrkilkylrgk...................sklskdllfn.gvlfllsFfvcRlvlfpylillsyldvasisveaap.lvlpviclilllvLqllnlyWfyliv 197
                  ++l v+ ++    ++ +++ pe+++  +   ++ +  +++ Yf+ d l+v+l+  + r+  +  ++HH i+++ +++ y    lg ++ a  +  el t fl +r++l+  + +                        + ++  ++ f ++++++Rl+l+p li+    ++ ++s+  ++ ++l v+  ++ ++L +ln+ W + ++
  MMETSP1325-20131115|10455_1  50 VALNVVNWDWkiiSTLKMThPEQVWHGE--YFHEFWYLTVFYFVVDlLWVTLIPGTVRSP-MTIIIHHSIVILYVMIPYQyPALGWCMGA-CMSVELNTWFLIARRVLNSKGVNpwrtfeevtgcsgdmgeiaG---LK-IKGtSIGFYITWVSIRLILYPALIVPFAKTYIDNSLAMGTyVNLIVVAPVIQVALTCLNIKWSIDLF 248
                  4555555555445333344599999663..33446677889*****77888888888875.77888998555555555551556666666.5678**************9855598888877776655544321...22.333379****************98877777776666655557777777777788********98765 PP

>> PF10066.4  Uncharacterized conserved protein (DUF2304)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.4      0.28   1.9e+03      66      81 ..     108     123 ..      85     130 .. 0.69
   2 ?   10.6   0.6     5e-05      0.34      23      96 ..     180     253 ..     175     256 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.28
    PF10066.4  66 lDallvlsillllill 81 
                  + +++  si++l++++
  MMETSP1325-20131115|10455_1 108 MTIIIHHSIVILYVMI 123
                  4455556666666665 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 5e-05
    PF10066.4  23 irkkkleisdlllwlvlwivllllalfPkiseeiaellGigrglDallvlsillllillfklylkidklereit 96 
                  ++ k ++i  +++w+ + ++l  + ++P   ++i + l +g  +++++v  ++ + ++ +++   id    +++
  MMETSP1325-20131115|10455_1 180 LKIKGTSIGFYITWVSIRLILYPALIVPFAKTYIDNSLAMGTYVNLIVVAPVIQVALTCLNIKWSIDLFRSKMK 253
                  5667789999****************************************999999998888877777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       446  (0.0326214); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.51
# Mc/sec: 1226.37
//
Query:       MMETSP1325-20131115|10457_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 215.67
//
Query:       MMETSP1325-20131115|10458_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.46
# Mc/sec: 291.73
//
Query:       MMETSP1325-20131115|10459_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.32s 00:00:00.63 Elapsed: 00:00:00.44
# Mc/sec: 315.88
//
Query:       MMETSP1325-20131115|10460_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-30  105.6   0.0    2.3e-30  105.5   0.0    1.0  1  PF04699.9  ARP2/3 complex 16 kDa subunit (p16-Arc)
     0.0035   16.9   0.0     0.0049   16.4   0.0    1.2  1  PF09384.5  UTP15 C terminal
  ------ inclusion threshold ------
      0.077   12.1   0.0       0.12   11.5   0.0    1.3  1  PF01300.13 Telomere recombination


Domain annotation for each model (and alignments):
>> PF04699.9  ARP2/3 complex 16 kDa subunit (p16-Arc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5   0.0   5.1e-34   2.3e-30      33     152 .]       8     127 .]       2     127 .] 0.95

  Alignments for each domain:
  == domain 1    score: 105.5 bits;  conditional E-value: 5.1e-34
    PF04699.9  33 saevaqkakqvrsllrsgdaeeALklvLena..plgadd.avKeaalktvlevLqsikasdiekvvkkldseqlDvLmkYlYkgmaapsgasqmsvlLsWheklvevaGlgsIvrvltdrrtv 152
                   aev++++  v+s+++++++ +AL+++L+++  +l +++ +vK+a++++v++v+++i +++i+ v++ ld   +D+LmkY+Ykg+ +p++a++   lL+Wh k++e  G g Ivr +tdr+tv
  MMETSP1325-20131115|10460_1   8 LAEVEARKGSVTSMVTQKNFVGALTAALADPekVLASKSaNVKSANAAVVFQVIEAIEDKEIDGVLEGLDPLVMDLLMKYVYKGLGTPENANS---LLKWHAKVLERCGPGGIVRSMTDRKTV 127
                  5789999*********************998446788888**************************************************988...*************************98 PP

>> PF09384.5  UTP15 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.1e-06    0.0049      22     105 ..      15     110 ..       2     113 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.1e-06
    PF09384.5  22 lkkydklLkkfryseALdavL.............vkekkpevtvavleeLrrRgaLrkALsgrdeetleplLnfllknitdpryvsvlvdvanvild 105
                    ++  +  + ++  AL a+L             vk+ + +v++ v+e++  +  ++  L+g d   +  l+++++k +  p+ ++ l+++ +++l+
  MMETSP1325-20131115|10460_1  15 KGSVTSMVTQKNFVGALTAALadpekvlasksanVKSANAAVVFQVIEAIEDK-EIDGVLEGLDPLVMDLLMKYVYKGLGTPENANSLLKWHAKVLE 110
                  55666777888888999999999999999999989999999999999999875.7**************************************9997 PP

>> PF01300.13  Telomere recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.6e-05      0.12      89     154 ..       7      75 ..       1      82 [. 0.90

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.6e-05
   PF01300.13  89 lpklvapglktvGvrlPdhplarlLlealgep...lvaTSanlsgepsltdaeeveeelgekvdlildg 154
                  + ++v +++++v  ++ ++ ++ +L +al  p   l++ San++  + +   + +e+  ++++d++l+g
  MMETSP1325-20131115|10460_1   7 VLAEVEARKGSVTSMVTQKNFVGALTAALADPekvLASKSANVKSANAAVVFQVIEAIEDKEIDGVLEG 75 
                  67789999*********************999999****************99999999999**99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       444  (0.0324751); expected 273.4 (0.02)
Passed bias filter:                      389  (0.0284523); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 608.67
//
Query:       MMETSP1325-20131115|10464_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 159.76
//
Query:       MMETSP1325-20131115|10461_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.7    8.5  11.3        4.8    7.1   7.8    1.6  1  PF11068.3  Protein of unknown function (DUF2869)
        4.9    7.0  17.5      0.035   13.9   4.4    2.3  2  PF14282.1  FlxA-like protein
        8.1    6.0   7.2         11    5.5   5.0    1.2  1  PF02862.12 DDHD domain
        9.5    6.1  12.0         14    5.5   8.3    1.2  1  PF12923.2  Ribosomal RNA-processing protein 7 (RRP7)


Domain annotation for each model (and alignments):
>> PF11068.3  Protein of unknown function (DUF2869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   7.8    0.0014       4.8      11      77 ..      54     149 ..      46     161 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0014
    PF11068.3  11 avvTeksKeelqeelqeqleqleqelqqLefqkkkalkeikkqsa.............................qqieeiqqqvekekakreeqkk 77 
                  av+  +  +el++ l++q +qle++l q e q  +++ + +++                               ++ eei ++ ekek++ ee+ k
  MMETSP1325-20131115|10461_1  54 AVIDRSERRELNARLKKQTSQLESQLVQVESQLARMEWQSEEKGKsqstgqtnptgwveqggagktkhedepcsKSAEEIAEEDEKEKKEKEEKEK 149
                  667778899***************************988887776677788888888888888888888888776677777777666666666654 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   4.4     1e-05     0.035      47      86 ..      66     105 ..      30     124 .. 0.76
   2 ?   -1.4   2.4       0.6     2e+03      38      53 ..     133     148 ..     121     162 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1e-05
    PF14282.1  47 eekqkqqqliqqQIqalqaQiaqlqsqqseeaqqsqessv 86 
                   +++kq +++++Q+ ++++Q+a+ + q +e+ +++   ++
  MMETSP1325-20131115|10461_1  66 ARLKKQTSQLESQLVQVESQLARMEWQSEEKGKSQSTGQT 105
                  4567899999999999999999999998888665554444 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.6
    PF14282.1  38 lssdeeltaeekqkqq 53 
                  +++++e+ ++ek++++
  MMETSP1325-20131115|10461_1 133 IAEEDEKEKKEKEEKE 148
                  3333333333333332 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   5.0    0.0033        11     101     174 ..      65     150 ..      16     163 .. 0.44

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0033
   PF02862.12 101 gkavkqsvesltsslsegiasslrnsslslssedeeseeeseasklsqks........................ksekkkeseeetkeeeeeakkekr 174
                  ++++k+++++l         s+l + +++l + + +see+ ++++                             ++++++ +ee++ke++e+++kek+
  MMETSP1325-20131115|10461_1  65 NARLKKQTSQL--------ESQLVQVESQLARMEWQSEEKGKSQS----TgqtnptgwveqggagktkhedepcSKSAEEIAEEDEKEKKEKEEKEKE 150
                  22222222222........22222222222222222222222222....1222345556666777777766554222222222222222222222222 PP

>> PF12923.2  Ribosomal RNA-processing protein 7 (RRP7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.3    0.0042        14      10      90 ..      69     150 ..      60     152 .. 0.68

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0042
    PF12923.2  10 krslpdeealqeevdeymekydkreeeakeeakkesepdeDGfitVtrkkkk..kkaglskkkaeeekakekekkkkkkkele 90 
                  k++  ++e+   +v++ +++ + ++ee+ +++ ++ +++  G++     +k+  ++++ sk++ e ++++ekekk+k++ke+e
  MMETSP1325-20131115|10461_1  69 KKQTSQLESQLVQVESQLARMEWQSEEKGKSQ-STGQTNPTGWVEQGGAGKTkhEDEPCSKSAEEIAEEDEKEKKEKEEKEKE 150
                  44455555556667777777776666655555.7899999****999998875666777777767777777777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1642  (0.120099); expected 273.4 (0.02)
Passed bias filter:                      747  (0.0546372); expected 273.4 (0.02)
Passed Vit filter:                        96  (0.00702165); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.41s 00:00:01.11 Elapsed: 00:00:00.56
# Mc/sec: 1069.80
//
Query:       MMETSP1325-20131115|10462_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   12.7   1.4       0.17   11.0   1.1    1.7  2  PF07062.7 Clc-like


Domain annotation for each model (and alignments):
>> PF07062.7  Clc-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2    0.0073        99     188     209 ..      63      84 ..      59      87 .. 0.85
   2 ?   11.0   1.1   1.2e-05      0.17     112     181 ..      76     147 ..      65     149 .] 0.77

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.0073
    PF07062.7 188 agalislvalllavlvtyfsfl 209
                   ga++ l+al+l +l +++++l
  MMETSP1325-20131115|10462_1  63 SGAFCALLALVLGMLLVLVRVL 84 
                  689***********99987765 PP

  == domain 2    score: 11.0 bits;  conditional E-value: 1.2e-05
    PF07062.7 112 lislllaalslls.gicasvssseailftillvlaallalvadiiFfvaaervdsrfl.kgivgtYEkriGy 181
                  ++ +l+ +lsl +  ++a ++ +     + + +l+  +a+v+ ++ +v a+rv+ r    g+ g +E+  G+
  MMETSP1325-20131115|10462_1  76 MLLVLVRVLSLHVtLVVAFCEVAVHSTEEPVKILSPEIAAVCRVVVVVEARRVNMRQScRGVPGAFERVAGM 147
                  3334455566644136777888877888888999999******************9877**********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       582  (0.0425688); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 686.65
//
Query:       MMETSP1325-20131115|10463_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-21   74.4   0.2    8.7e-21   74.0   0.1    1.2  1  PF06479.7 Ribonuclease 2-5A


Domain annotation for each model (and alignments):
>> PF06479.7  Ribonuclease 2-5A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   0.1   6.4e-25   8.7e-21      54     123 ..       2      72 ..       1      77 [. 0.91

  Alignments for each domain:
  == domain 1    score: 74.0 bits;  conditional E-value: 6.4e-25
    PF06479.7  54 kfrkykgdsvrDLLralRnkkeHyeelpkelkeilgelPdgflqYfterFPkLlikvykvlk.eleeeklf 123
                  k+r+y+ +svrD Lr+lRnk++H++elp+++++ l + P+g+  Yf++rFP+Ll+++y+v k  + ++++f
  MMETSP1325-20131115|10463_1   2 KWRRYDVSSVRDCLRVLRNKRHHWHELPNHVQQLLLPFPSGLDVYFEHRFPRLLLHCYNVAKrWMPYDRIF 72 
                  79**********************************************************99445555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       757  (0.0553686); expected 273.4 (0.02)
Passed bias filter:                      486  (0.0355471); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.41s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 580.66
//
Query:       MMETSP1325-20131115|10465_1  [L=321]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.35s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1451.38
//
Query:       MMETSP1325-20131115|10469_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-33  113.7   2.0    6.5e-33  113.5   1.4    1.0  1  PF02028.12 BCCT family transporter


Domain annotation for each model (and alignments):
>> PF02028.12  BCCT family transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.5   1.4   4.8e-37   6.5e-33      12     108 ..       1      97 [.       1     113 [. 0.96

  Alignments for each domain:
  == domain 1    score: 113.5 bits;  conditional E-value: 4.8e-37
   PF02028.12  12 lvllvllfpeaaeavlsslnswilenfgwfylllvllflvfllvlafsryGkiklGkddekpefstfsWfamlfsaGlgigllfwgvaEplyhfasp 108
                  +v++ +++pe +++ +s +++w++e++ wfy+++ ++++++l++l+fs+y +i+lGkd+e+p +s+++Wfamlfs+G+++gl++++vaEp++h++ +
  MMETSP1325-20131115|10469_1   1 FVIWSCIDPEGSNERISMWKTWVTEEWTWFYIASQNIWIALLIYLMFSKYRNIRLGKDGEEPAYSYATWFAMLFSCGVATGLFYYSVAEPMWHYRGW 97 
                  89********************************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 586.34
//
Query:       MMETSP1325-20131115|10468_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-14   52.2   0.0    4.8e-14   51.7   0.0    1.2  1  PF09409.5 PUB domain
  ------ inclusion threshold ------
      0.085   12.4   0.0       0.15   11.6   0.0    1.3  1  PF07332.6 Protein of unknown function (DUF1469)


Domain annotation for each model (and alignments):
>> PF09409.5  PUB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.0     7e-18   4.8e-14       4      74 ..      29     101 ..      26     115 .. 0.86

  Alignments for each domain:
  == domain 1    score: 51.7 bits;  conditional E-value: 7e-18
    PF09409.5   4 eefkkaleiLlkllkNIlknPneekyRrirlsNktfkekilsvegavelLellGFkeeee..eeflvlpeqse 74 
                  +  + al +  kll N+ +n++++k+ ++rl Nk+f +k+ sv g++el+ ++GF  +++  e  lv+pe++e
  MMETSP1325-20131115|10468_1  29 DVALGALGVASKLLGNLAQNFSDAKFHKVRLANKAFNKKVGSVAGGIELMTCAGFFLTTDdeEPVLVFPEDNE 101
                  66677888889*************************************************7778888885544 PP

>> PF07332.6  Protein of unknown function (DUF1469)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.2e-05      0.15       2      49 ..      39      86 ..      38      87 .. 0.95

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.2e-05
    PF07332.6  2 gelvsdllaqvsslvrkeleLakaElkekakragkglgllgaalvlal 49
                 ++l+++l++ +s    + ++La + + +k+ ++++g+ l+ +a++++ 
  MMETSP1325-20131115|10468_1 39 SKLLGNLAQNFSDAKFHKVRLANKAFNKKVGSVAGGIELMTCAGFFLT 86
                 5799*****************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 616.93
//
Query:       MMETSP1325-20131115|10470_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 541.79
//
Query:       MMETSP1325-20131115|10471_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-19   68.0   0.0    5.2e-19   67.9   0.0    1.0  1  PF02569.10 Pantoate-beta-alanine ligase


Domain annotation for each model (and alignments):
>> PF02569.10  Pantoate-beta-alanine ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.0   3.8e-23   5.2e-19      69     138 ..       3      72 .]       1      72 [] 0.96

  Alignments for each domain:
  == domain 1    score: 67.9 bits;  conditional E-value: 3.8e-23
                  TTS---HHHHHHHHHH----EEE---HHHH------SEEE...-GGGS------TTS----HHHHHHHHH CS
   PF02569.10  69 daYPRtledDlkllekekvdvvFaPeveemYPkgletkvevekglsekLeGksRpghFrGvatvvtklfn 138
                    YPRtl+ D+++l + + d+vFaP++ +mYP+ ++t v +++   +  eG+sRpg+FrGvatv tklfn
  MMETSP1325-20131115|10471_1   3 GTYPRTLDADVEILGHVGTDLVFAPNALVMYPEHFSTYVDMSQFDEQPGEGSSRPGFFRGVATVCTKLFN 72 
                  68***************************************99888999********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|10466_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-05   23.8   5.9      3e-05   23.5   4.1    1.1  1  PF08507.5 COPI associated protein
  ------ inclusion threshold ------
      0.021   14.3   0.8      0.032   13.7   0.5    1.2  1  PF05803.7 Chordopoxvirus L2 protein
       0.49    9.5   2.1       0.55    9.4   1.4    1.0  1  PF06432.6 Phosphatidylinositol N-acetylglucosaminyltransferase


Domain annotation for each model (and alignments):
>> PF08507.5  COPI associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   4.1   6.7e-09     3e-05      42     104 ..       2      70 ..       1      87 [. 0.91

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 6.7e-09
    PF08507.5  42 lfGlliillEfklki......lykyasFlfsflGRGlfyiflgtlllsssvlsiiiglllflvGliyiv 104
                  +f+ll+i++E  +        l + + Flf  lGR lf+if++ +l++ + + i++++ll+  +++ ++
  MMETSP1325-20131115|10466_1   2 AFSLLLIGIEAGVLPppfiekLRNDMGFLFRPLGRLLFVIFIAFMLFGFGTFGIVVAVLLIAQAIFNVY 70 
                  699999****97666899999999*************************************99988765 PP

>> PF05803.7  Chordopoxvirus L2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.5   7.1e-06     0.032      26      75 ..      20      66 ..      18      76 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 7.1e-06
    PF05803.7 26 ideiekqqafilrpllRlliDllillivliiliiRlvkRNykillilvll 75
                 i+++ +   f++rpl Rll+ ++i ++ + + ++ +v+    +lli  ++
  MMETSP1325-20131115|10466_1 20 IEKLRNDMGFLFRPLGRLLFVIFIAFMLFGFGTFGIVVA---VLLIAQAI 66
                 778999999*******************99988888874...44444433 PP

>> PF06432.6  Phosphatidylinositol N-acetylglucosaminyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.4   0.00012      0.55     195     259 ..       2      68 ..       1      84 [. 0.68

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00012
    PF06432.6 195 vFslllfsievfallPvfrrslrktskrlhvvl..tvllvilavalvgtlllkkillllllllvvli 259
                  +Fslll++ie  +l P f ++lr+    l   l  +++++++a++l+g ++++ ++++ll++  ++ 
  MMETSP1325-20131115|10466_1   2 AFSLLLIGIEAGVLPPPFIEKLRNDMGFLFRPLgrLLFVIFIAFMLFGFGTFGIVVAVLLIAQAIFN 68 
                  6**********************99877665441144444555555556666666666554444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       639  (0.0467379); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 557.52
//
Query:       MMETSP1325-20131115|10472_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       486  (0.0355471); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 753.14
//
Query:       MMETSP1325-20131115|10475_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.7   0.0      0.064   12.9   0.0    1.6  1  PF12014.3 Domain of unknown function (DUF3506)


Domain annotation for each model (and alignments):
>> PF12014.3  Domain of unknown function (DUF3506)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.7e-06     0.064      64      86 ..      66      88 ..      62     156 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.7e-06
    PF12014.3 64 sleAiKLTGDpnvPrGevtFvak 86
                 +le++K  GD+nvP+ +++Fv +
  MMETSP1325-20131115|10475_1 66 RLEGMKVVGDANVPASKLSFVVD 88
                 699*****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1083.35
//
Query:       MMETSP1325-20131115|10476_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-11   44.3   0.0    1.3e-11   44.0   0.0    1.1  1  PF00069.20 Protein kinase domain
    9.1e-06   24.8   0.1    1.1e-05   24.5   0.1    1.1  1  PF07714.12 Protein tyrosine kinase
     0.0017   18.0   0.0       0.13   11.9   0.0    2.4  2  PF00027.24 Cyclic nucleotide-binding domain
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.16   11.6   0.0    1.3  1  PF00406.17 Adenylate kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   3.9e-15   1.3e-11       3      76 ..      64     138 ..      62     139 .] 0.92

  Alignments for each domain:
  == domain 1    score: 44.0 bits;  conditional E-value: 3.9e-15
                  EEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH-TTB--EEEEEEESTEEEEE CS
   PF00069.20   3 lleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr.ElkilkklsHpnivkllevfeekdelylv 76 
                   +++lG G+fG+V  +++  tg+ +A+K+++k +  +  +++++  E +il +++Hp+i++l+++++++++l+++
  MMETSP1325-20131115|10476_1  64 HIRTLGTGTFGRVKLVQHGPTGNVFALKCMQKAQIVQAHQERNIMnEKNILLECKHPFILELYRTYMNQNQLFML 138
                  6799*****************************9999888777767***********************999885 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.1   3.3e-09   1.1e-05       2      78 ..      63     137 ..      62     139 .] 0.82

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 3.3e-09
                  EEEEEE-------EEEEEEETTTTSSEEEEEEEEECT..TSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEE CS
   PF07714.12   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlke..saeeeekeefleeakimkklkhpnivkllgvctkeeplli 78 
                  e  ++lG G+fG+V   ++      +    a+K++++    + ++++++++e +i+ ++khp i++l+  ++++++l++
  MMETSP1325-20131115|10476_1  63 EHIRTLGTGTFGRVKLVQHG----PTGNVFALKCMQKaqIVQAHQERNIMNEKNILLECKHPFILELYRTYMNQNQLFM 137
                  67899*********998888....566667889885422455666899************************9888776 PP

>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   3.8e-05      0.13      62      88 ..       1      27 [.       1      30 [. 0.92
   2 ?    3.8   0.0     0.013        45      26      60 ..      74     117 ..      72     123 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.8e-05
                 -SSEEEEEEEEEEEEEEHHHHHHHHCC CS
   PF00027.24 62 rsatvvaltdvevlvipredfrellek 88
                 r a+v+a + ve+lv++++df+++l k
  MMETSP1325-20131115|10476_1  1 RMADVIADGSVECLVLEQNDFQRMLGK 27
                 6799*******************9986 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.013
                  -EEEEEEE-----EE.........EEEEE-TTEECSGGGCCSSS CS
   PF00027.24  26 Gkvkvykndedgkes.........ilaelgpGdffGelalltge 60 
                  G+vk++++++ g+++         i+  +++  +++e  +l++ 
  MMETSP1325-20131115|10476_1  74 GRVKLVQHGPTGNVFalkcmqkaqIVQAHQERNIMNEKNILLEC 117
                  9************9988888888888777777777777777665 PP

>> PF00406.17  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.8e-05      0.16      21      90 ..      64     134 ..      50     138 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 4.8e-05
                  S-EEEE---HHHHHHHCT-----H.HHHHHHTT----HHHHHHHHHHHHHSHCGH-EEEEE----SHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00406.17  21 glvhlstGdllRaevksgtelGke.akevmdkgelvpdevvvklvkerleqkdkkkgflldgfPRtveqae 90 
                  ++  l tG + R ++ ++ ++G+  a ++m+k+++v  +   ++++e+    ++k+ f+l+ +   ++q++
  MMETSP1325-20131115|10476_1  64 HIRTLGTGTFGRVKLVQHGPTGNVfALKCMQKAQIVQAHQERNIMNEKNILLECKHPFILELYRTYMNQNQ 134
                  5678999*******99999999862679******************9999899********9977777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 666.19
//
Query:       MMETSP1325-20131115|10478_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|10480_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 640.66
//
Query:       MMETSP1325-20131115|10482_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-07   29.5  12.6     0.0003   20.1   2.5    2.3  2  PF07699.8  GCC2 and GCC3
    5.5e-05   22.6  12.1      0.017   14.7   1.4    2.2  2  PF07562.9  Nine Cysteines Domain of family 3 GPCR
      0.006   16.5  11.8      0.025   14.5   0.4    3.2  3  PF00020.13 TNFR/NGFR cysteine-rich region
  ------ inclusion threshold ------
        1.4    8.6  13.1        3.9    7.2   9.1    1.7  1  PF12773.2  Double zinc ribbon
          6    6.9  10.6         22    5.0   7.3    2.0  1  PF12898.2  Stc1 domain
        6.1    7.0   9.2         17    5.5   2.6    2.0  2  PF13948.1  Domain of unknown function (DUF4215)


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   4.9   7.6e-06     0.017      11      48 .]       2      38 ..       1      38 [. 0.82
   2 !   20.1   2.5   1.3e-07    0.0003       1      36 [.      25      59 ..      25      62 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 7.6e-06
    PF07699.8 11 CepCprGtYkneegqkkCiaCppgttTskkgsksesdC 48
                 C+ C  GtY++    ++C  C +g+  s+++++   dC
  MMETSP1325-20131115|10482_1  2 CSSCDAGTYSKGLAAVNCSTCTAGK-ASSTRASECYDC 38
                 ************************5.555555555555 PP

  == domain 2    score: 20.1 bits;  conditional E-value: 1.3e-07
    PF07699.8  1 GtylkkgnkkCepCprGtYkneegqkkCiaCppgtt 36
                 G+ ++++ ++C  C  G Y++e+ + +C +C +gt+
  MMETSP1325-20131115|10482_1 25 GKASSTRASECYDCDSGKYSDEGAS-SCSSCDAGTF 59
                 78899999***********987655.5*****9965 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   1.4   7.4e-06     0.017      28      53 ..       2      27 ..       1      28 [. 0.91
   2 !   13.6   1.9   1.7e-05     0.038      27      53 ..      34      59 ..      33      60 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7.4e-06
    PF07562.9 28 CvpCpegeisnetdettCkkCpeeqw 53
                 C +C++g++s+   +++C +C+ ++ 
  MMETSP1325-20131115|10482_1  2 CSSCDAGTYSKGLAAVNCSTCTAGKA 27
                 ***********99********98875 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 1.7e-05
    PF07562.9 27 dCvpCpegeisnetdettCkkCpeeqw 53
                 +C +C+ g++s+ +++ +C +C+ ++ 
  MMETSP1325-20131115|10482_1 34 ECYDCDSGKYSD-EGASSCSSCDAGTF 59
                 7***********.6789*****98865 PP

>> PF00020.13  TNFR/NGFR cysteine-rich region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.1     0.007        16      18      27 ..       2      11 ..       1      14 [. 0.85
   2 !    5.5   1.9    0.0072        16       1      25 [.       5      26 ..       5      35 .. 0.73
   3 !   14.5   0.4   1.1e-05     0.025       1      25 [.      38      58 ..      38      61 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.007
                 EE-B-TTCEE CS
   PF00020.13 18 CskCepgtvl 27
                 Cs+C+ gt+ 
  MMETSP1325-20131115|10482_1  2 CSSCDAGTYS 11
                 9****99985 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0072
                 C-TTEEEESSCS.EEEEEEE-B-TTC CS
   PF00020.13  1 CeegtYtdsknh.rqClsCskCepgt 25
                 C  gtY++  +     ++Cs+C+ g+
  MMETSP1325-20131115|10482_1  5 CDAGTYSK--GLaA--VNCSTCTAGK 26
                 99999999..4323..6678888776 PP

  == domain 3    score: 14.5 bits;  conditional E-value: 1.1e-05
                 C-TTEEEESSCSEEEEEEE-B-TTC CS
   PF00020.13  1 CeegtYtdsknhrqClsCskCepgt 25
                 C  g+Y+d ++ + C   s+C+ gt
  MMETSP1325-20131115|10482_1 38 CDSGKYSD-EGASSC---SSCDAGT 58
                 9*******.665656...8888887 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   9.1    0.0017       3.9       1      49 [.       2      54 ..       2      55 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0017
    PF12773.2  1 CpqCgaenpsg...arfCpqCgaklkeataeevlCpsCge.s.vspkarfCpnC 49
                 C++C a + s+   a  C++C a    + +++  C  C++ + ++++a+ C +C
  MMETSP1325-20131115|10482_1  2 CSSCDAGTYSKglaAVNCSTCTAGKA-SSTRASECYDCDSgKySDEGASSCSSC 54
                 88999886665566999******999.4555899****99746*********** PP

>> PF12898.2  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   7.3    0.0097        22      32      64 ..      11      46 ..       1      60 [. 0.72

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0097
    PF12898.2 32 aasqklikCreCtgeqerel...eCskCkktkplee 64
                 ++  ++++C++Ct ++       eC  C+  k  +e
  MMETSP1325-20131115|10482_1 11 SKGLAAVNCSTCTAGKASSTrasECYDCDSGKYSDE 46
                 5566789******55433333459999998776655 PP

>> PF13948.1  Domain of unknown function (DUF4215)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   6.9     0.026        60       1      47 [.       2      54 ..       2      55 .. 0.75
   2 ?    5.5   2.6    0.0077        17       1      25 [.      35      58 ..      35      62 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.026
    PF13948.1  1 CleCqegyylnqnnqkCesiCGDgiia.....gdEqCddgnsvsnd..gCnndC 47
                 C +C+ g y +      +s C  g  +      + +Cd+g + ++    C++ C
  MMETSP1325-20131115|10482_1  2 CSSCDAGTYSKGLAAVNCSTCTAGKASstrasECYDCDSGKYSDEGasSCSS-C 54
                 99******99988666679999999886666666888888666654447777.7 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0077
    PF13948.1  1 CleCqegyylnqnnqkCesiCGDgi 25
                 C+ C++g y ++  ++C s+C  g+
  MMETSP1325-20131115|10482_1 35 CYDCDSGKYSDEGASSC-SSCDAGT 58
                 999****9999999999.9997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       555  (0.0405939); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                        20  (0.00146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 321.21
//
Query:       MMETSP1325-20131115|10473_1  [L=503]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-18   66.2   0.0    7.5e-18   63.9   0.0    1.8  2  PF00996.13 GDP dissociation inhibitor


Domain annotation for each model (and alignments):
>> PF00996.13  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.0   5.5e-22   7.5e-18     165     263 ..      10     111 ..       7     117 .. 0.92
   2 ?   -0.4   0.0     0.017   2.4e+02     272     349 ..     157     247 ..     147     265 .. 0.67

  Alignments for each domain:
  == domain 1    score: 63.9 bits;  conditional E-value: 5.5e-22
                  TSBHHHHHHH-----HHHHH----SS--S...SSGGGGSBSHHHHHHHHHHHHHHHH----SEEEE-----------HHHHHH----EE-S---SB--B-TT CS
   PF00996.13 165 kktmkevykkfgleektsdfvghalalyr...ddeyleePaletleriklyleslarygksPylyPlYGlGelPqgfarlsaiyGGtymLdkpvdeivlded 263
                  ++ +++++++++l  + + +v+hala+++   +d++    + e+l+r++ +l +l++yg++ +l PlYG  e+Pq+f+rl+a+  G+y+L +p+  +v+d++
  MMETSP1325-20131115|10473_1  10 RRPFSDFLAAWKLPVRLTGVVTHALAFVTepqPDASTGMSTEEGLTRLHQHLTALGQYGDTAFLAPLYGAAEMPQAFCRLCAVRNGIYLLRQPIPAVVVDSQ 111
                  677899999999999************96222689999999*********************************************************9875 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.017
                  -----B-S-EEE-GGG-G...............GGEEEE-EEEEEEEEESS--TTSTT-SSEEEEE-GGG----S-EEEEEEEGGGTSS---- CS
   PF00996.13 272 edevlrakkvvsdPsYvp...............ekvkkkgkvvraicilshPipntkdaesvqiilpqnqvgrksdiyvalvssahnvaakgk 349
                  +++v+ +++  ++  Yvp                  k+++  vr i il+ P+++ k  + v +i p    +r   i+ +l  ++  v+++g 
  MMETSP1325-20131115|10473_1 157 NGHVVTCDRFACASDYVPgldgsgvsgaggadgAVAKSMTWTVRRISILDRPLNE-KWPRFVTVIAPGTVGNRAP-IHANLQDESSFVCPNGS 247
                  5666777777777777666665555554444323345666789999999999854.5667788888877766665.88888888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.37s 00:00:01.20 Elapsed: 00:00:00.60
# Mc/sec: 2008.95
//
Query:       MMETSP1325-20131115|10481_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-18   63.6   0.0    0.00048   19.5   0.0    4.4  4  PF13414.1  TPR repeat
    3.3e-17   60.8   0.0    0.00046   19.7   0.0    5.7  6  PF07719.12 Tetratricopeptide repeat
    6.8e-17   60.1   0.2    5.1e-06   25.7   0.0    4.9  4  PF00515.23 Tetratricopeptide repeat
      5e-15   54.7   0.8    1.3e-14   53.4   0.6    1.7  1  PF02209.14 Villin headpiece domain
    1.3e-11   43.9   0.1       0.12   12.9   0.0    5.1  5  PF13428.1  Tetratricopeptide repeat
    2.4e-11   43.8   0.0     0.0011   19.4   0.0    4.4  4  PF13432.1  Tetratricopeptide repeat
    2.9e-11   43.0   0.0    0.00015   21.5   0.0    3.8  4  PF13424.1  Tetratricopeptide repeat
    3.5e-10   39.4   0.1      0.039   13.7   0.0    3.6  3  PF13371.1  Tetratricopeptide repeat
    4.5e-10   38.4   0.0      0.092   12.4   0.0    4.6  4  PF13181.1  Tetratricopeptide repeat
    2.7e-08   33.5   0.0      0.099   13.0   0.0    4.9  4  PF13174.1  Tetratricopeptide repeat
    8.8e-07   28.8   0.0       0.55   10.2   0.0    3.3  3  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
    3.2e-05   23.6   0.0      0.018   15.1   0.0    4.7  5  PF13431.1  Tetratricopeptide repeat
    0.00012   21.4   0.0          1    9.2   0.0    4.5  4  PF13176.1  Tetratricopeptide repeat
    0.00086   19.0   0.0        2.6    7.9   0.0    4.0  4  PF13374.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.026   14.8   0.1         17    6.0   0.0    3.0  2  PF07721.9  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   5.3e-07   0.00048      36      67 ..      42      72 ..      10      73 .. 0.77
   2 !   12.2   0.0   0.00011     0.097      12      34 ..      98     120 ..      97     127 .. 0.87
   3 !   16.8   0.0   3.7e-06    0.0034       5      69 .]     134     197 ..     130     197 .. 0.93
   4 !    9.6   0.0   0.00067      0.61       2      36 ..     201     236 ..     200     242 .. 0.90

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 5.3e-07
    PF13414.1 36 naelyynlAlaylklgkdyeeAledyekAlel 67
                 +   +y ++++++ l  +ye+A+ed+ekA ++
  MMETSP1325-20131115|10481_1 42 DFRPWYIRGACHFALK-KYESAVEDCEKAFAI 72
                 44589*********96.7***********875 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 0.00011
    PF13414.1  12 alfkegdydeAieayekAleldp 34 
                  +lf++g+ deA++++++Al+l+p
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDRALSLQP 120
                  58999***************998 PP

  == domain 3    score: 16.8 bits;  conditional E-value: 3.7e-06
    PF13414.1   5 alkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAleldP 69 
                  a +++G alf +g++ e+i+  +  ++ +p+  ++  +l+++ + +  d++  +e++e Al+ +P
  MMETSP1325-20131115|10481_1 134 AVFNKGLALFAKGQMPESIAVMQAMVDQWPDLISAREGLGQLAILQE-DWKTGIENLEVALAGNP 197
                  679******************************************97.7899********98665 PP

  == domain 4    score: 9.6 bits;  conditional E-value: 0.00067
    PF13414.1   2 nAealkelGnalfkegdydeAieayekAle.ldpnn 36 
                  +A  l+ lG a+f  gd+d A e +++ l+ +dp++
  MMETSP1325-20131115|10481_1 201 RANLLFDLGVAYFITGDLDTAKERFKRVLKkMDPDH 236
                  6999*************************7479987 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       6.6     6e+03       4      27 ..      11      34 ..       9      37 .. 0.70
   2 !   19.7   0.0     5e-07   0.00046       4      29 ..      46      71 ..      43      73 .. 0.92
   3 !   11.9   0.0   0.00016      0.15      10      33 ..      98     121 ..      97     122 .. 0.91
   4 ?    4.4   0.0     0.041        37       5      26 ..     136     157 ..     133     161 .. 0.87
   5 ?    0.3   0.0      0.86   7.9e+02       6      29 ..     171     194 ..     168     198 .. 0.87
   6 !   16.2   0.0   6.8e-06    0.0062       1      30 [.     202     231 ..     202     235 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 6.6
                 HHHHHHHHHHTT-HHHHHHHHHHH CS
   PF07719.12  4 lynlGlayyklgdyeeAleafekA 27
                 l+  + ++ +l  +++++++  + 
  MMETSP1325-20131115|10481_1 11 LMGKATSLQRLECWNDCVALATQM 34
                 666777888888888887776665 PP

  == domain 2    score: 19.7 bits;  conditional E-value: 5e-07
                 HHHHHHHHHHTT-HHHHHHHHHHHHH CS
   PF07719.12  4 lynlGlayyklgdyeeAleafekAle 29
                 +y +G ++++l++ye A+e++ekA +
  MMETSP1325-20131115|10481_1 46 WYIRGACHFALKKYESAVEDCEKAFA 71
                 9***********************76 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 0.00016
                  HHHHTT-HHHHHHHHHHHHHH-TT CS
   PF07719.12  10 ayyklgdyeeAleafekAleldPn 33 
                  +++ +g+ +eAl+++++Al+l+P+
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDRALSLQPG 121
                  57889*****************96 PP

  == domain 4    score: 4.4 bits;  conditional E-value: 0.041
                  HHHHHHHHHTT-HHHHHHHHHH CS
   PF07719.12   5 ynlGlayyklgdyeeAleafek 26 
                  +n Gla++++g+  e ++ ++ 
  MMETSP1325-20131115|10481_1 136 FNKGLALFAKGQMPESIAVMQA 157
                  89*************9998875 PP

  == domain 5    score: 0.3 bits;  conditional E-value: 0.86
                  HHHHHHHHTT-HHHHHHHHHHHHH CS
   PF07719.12   6 nlGlayyklgdyeeAleafekAle 29 
                   lG++++ + d++  +e +e Al+
  MMETSP1325-20131115|10481_1 171 GLGQLAILQEDWKTGIENLEVALA 194
                  599*********999999998886 PP

  == domain 6    score: 16.2 bits;  conditional E-value: 6.8e-06
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF07719.12   1 aealynlGlayyklgdyeeAleafekAlel 30 
                  a +l+ lG ay+  gd++ A+e f+++l+ 
  MMETSP1325-20131115|10481_1 202 ANLLFDLGVAYFITGDLDTAKERFKRVLKK 231
                  5789************************96 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   5.6e-09   5.1e-06       4      28 ..      46      70 ..      43      72 .. 0.92
   2 !   12.6   0.0   7.6e-05      0.07      10      32 ..      98     120 ..      97     121 .. 0.91
   3 ?    4.4   0.0      0.03        27       5      21 ..     136     152 ..     134     153 .. 0.90
   4 !   11.1   0.0   0.00022       0.2       1      29 [.     202     230 ..     202     231 .. 0.91

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 5.6e-09
                 HHHHHHHHHHTT-HHHHHHHHHHHH CS
   PF00515.23  4 lynlGnaylklgkydeAleyyekAL 28
                 +y +G++++ l+ky+ A+e++ekA 
  MMETSP1325-20131115|10481_1 46 WYIRGACHFALKKYESAVEDCEKAF 70
                 9**********************96 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 7.6e-05
                  HHHHTT-HHHHHHHHHHHHHHHT CS
   PF00515.23  10 aylklgkydeAleyyekALelnP 32 
                  +++ +g+ deAl+ +++AL+l+P
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDRALSLQP 120
                  678899***************99 PP

  == domain 3    score: 4.4 bits;  conditional E-value: 0.03
                  HHHHHHHHHTT-HHHHH CS
   PF00515.23   5 ynlGnaylklgkydeAl 21 
                  +n+G+a++ +g+  e +
  MMETSP1325-20131115|10481_1 136 FNKGLALFAKGQMPESI 152
                  7***********99977 PP

  == domain 4    score: 11.1 bits;  conditional E-value: 0.00022
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
   PF00515.23   1 akalynlGnaylklgkydeAleyyekALe 29 
                  a+ l+ lG+ay+  g++d A e ++++L+
  MMETSP1325-20131115|10481_1 202 ANLLFDLGVAYFITGDLDTAKERFKRVLK 230
                  678999***************99999986 PP

>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.6   1.4e-17   1.3e-14       1      36 []     377     412 .]     377     412 .] 0.99

  Alignments for each domain:
  == domain 1    score: 53.4 bits;  conditional E-value: 1.4e-17
                  GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT-- CS
   PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgLF 36 
                  YL de+Feev+gMtk +F+++P+WKq++lK ++gLF
  MMETSP1325-20131115|10481_1 377 YLEDEEFEEVLGMTKAAFNETPKWKQQKLKEDAGLF 412
                  9**********************************9 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.31   2.8e+02       2      30 ..      44      72 ..      43      81 .. 0.86
   2 !   12.6   0.0   0.00016      0.15      10      33 ..      98     121 ..      96     130 .. 0.85
   3 !    8.8   0.0    0.0028       2.5       8      44 .]     139     175 ..     133     175 .. 0.93
   4 ?    3.7   0.0      0.12   1.1e+02       3      39 ..     168     204 ..     166     205 .. 0.90
   5 !   12.9   0.0   0.00013      0.12       2      34 ..     203     236 ..     202     242 .. 0.89

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.31
    PF13428.1  2 eallalarallalGdpdeAiallrralal 30
                 + ++ +++ ++al  ++ A++ +++a a 
  MMETSP1325-20131115|10481_1 44 RPWYIRGACHFALKKYESAVEDCEKAFAI 72
                 569999***************99999775 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 0.00016
    PF13428.1  10 allalGdpdeAiallrralalaPd 33 
                  +l+ +G+ deA+al++ral+l+P+
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDRALSLQPG 121
                  6899******************94 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.0028
    PF13428.1   8 arallalGdpdeAiallrralalaPddaealllLarl 44 
                  + al+a G+  e ia+ ++++ + Pd   a+  L++l
  MMETSP1325-20131115|10481_1 139 GLALFAKGQMPESIAVMQAMVDQWPDLISAREGLGQL 175
                  67999*****************************997 PP

  == domain 4    score: 3.7 bits;  conditional E-value: 0.12
    PF13428.1   3 allalarallalGdpdeAiallrralalaPddaeall 39 
                  a+  l+++ + ++d++ +i+ l+ ala +P+  +a l
  MMETSP1325-20131115|10481_1 168 AREGLGQLAILQEDWKTGIENLEVALAGNPHPSRANL 204
                  667899************************9999876 PP

  == domain 5    score: 12.9 bits;  conditional E-value: 0.00013
    PF13428.1   2 eallalarallalGdpdeAiallrralal.aPdd 34 
                  ++l +l+ a++  Gd+d A + ++r+l++ +Pd+
  MMETSP1325-20131115|10481_1 203 NLLFDLGVAYFITGDLDTAKERFKRVLKKmDPDH 236
                  6899***********************8658986 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.26   2.4e+02      34      53 ..      46      65 ..      46      74 .. 0.85
   2 !   19.4   0.0   1.3e-06    0.0011       7      63 ..      99     164 ..      97     166 .. 0.92
   3 !   18.8   0.0   1.8e-06    0.0016       2      62 ..     137     197 ..     136     200 .. 0.96
   4 !   13.9   0.0   6.3e-05     0.057       3      63 ..     172     235 ..     172     237 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.26
    PF13432.1 34 llllaeallrlgrldeAaal 53
                 ++ ++ ++++l++++ A++ 
  MMETSP1325-20131115|10481_1 46 WYIRGACHFALKKYESAVED 65
                 8999**********999865 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 1.3e-06
    PF13432.1   7 llraGdydeAlaaleaalalaPe.........aaeallllaeallrlgrldeAaallraalalaPd 63 
                  l+ +G+ deAla+ ++al l+P+            a ++ + al+++g+ +e++a+ +a+++ +Pd
  MMETSP1325-20131115|10481_1  99 LFTNGQADEALALCDRALSLQPGidnprmveeKRHAVFNKGLALFAKGQMPESIAVMQAMVDQWPD 164
                  7889*****************66666778888******************************9997 PP

  == domain 3    score: 18.8 bits;  conditional E-value: 1.8e-06
    PF13432.1   2 alArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraalalaP 62 
                   +++al++ G+  e +a+ +a ++++P+   a+ +l++++  + +++  ++ l+ ala++P
  MMETSP1325-20131115|10481_1 137 NKGLALFAKGQMPESIAVMQAMVDQWPDLISAREGLGQLAILQEDWKTGIENLEVALAGNP 197
                  6899*****************************************************9998 PP

  == domain 4    score: 13.9 bits;  conditional E-value: 6.3e-05
    PF13432.1   3 lArallraGdydeAlaaleaalala..PeaaeallllaeallrlgrldeAaallraal.alaPd 63 
                  l+++++ + d++  ++ le ala +  P  a+ l+ l++a++  g+ld A + +++ l + +Pd
  MMETSP1325-20131115|10481_1 172 LGQLAILQEDWKTGIENLEVALAGNphPSRANLLFDLGVAYFITGDLDTAKERFKRVLkKMDPD 235
                  57788888999999999988999998888**********************9999999666666 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0056       5.1      12      34 ..      50      72 ..       7      74 .. 0.74
   2 !    9.9   0.0   0.00066      0.61      14      68 ..      98     154 ..      85     161 .. 0.79
   3 ?    3.6   0.0     0.064        58       9      74 ..     136     194 ..     128     197 .. 0.84
   4 !   21.5   0.0   1.6e-07   0.00015       6      74 ..     167     230 ..     162     232 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0056
    PF13424.1 12 alvlrrlgdydeAlelyekalel 34
                 + ++++l++y++A e +eka ++
  MMETSP1325-20131115|10481_1 50 GACHFALKKYESAVEDCEKAFAI 72
                 55566666666666666666554 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00066
    PF13424.1  14 vlrrlgdydeAlelyekalellrel..gddhpdtaralnnlanlylalgdydeAley 68 
                  vl+  g+ deAl+l+ +al l+     ++   +   a +n + ++ a+g+  e+++ 
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDRALSLQPGIdnPRMVEEKRHAVFNKGLALFAKGQMPESIAV 154
                  57899***************9776632334677788888888888888888888775 PP

  == domain 3    score: 3.6 bits;  conditional E-value: 0.064
    PF13424.1   9 nnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                  +n +l+l+++g+  e+++  +  ++ +       pd+ +a   l++l   ++d +  +e le Al+
  MMETSP1325-20131115|10481_1 136 FNKGLALFAKGQMPESIAVMQAMVDQW-------PDLISAREGLGQLAILQEDWKTGIENLEVALA 194
                  688999999999999998888777776.......89999999999999999999999999999987 PP

  == domain 4    score: 21.5 bits;  conditional E-value: 1.6e-07
    PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgdydeAleylekAle 74 
                  ++   l+++   ++d++  +e +e al     +g+ hp +a++l++l+ +y   gd+d A+e ++++l+
  MMETSP1325-20131115|10481_1 167 SAREGLGQLAILQEDWKTGIENLEVAL-----AGNPHPSRANLLFDLGVAYFITGDLDTAKERFKRVLK 230
                  566678888888888888888888887.....6777******************************997 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0013       1.2      25      55 ..      39      69 ..      17      85 .. 0.80
   2 !   12.7   0.0   8.6e-05     0.079       4      61 ..      98     164 ..      96     171 .. 0.85
   3 !   13.7   0.0   4.2e-05     0.039       3      64 ..     174     238 ..     172     247 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0013
    PF13371.1 25 aPddpyerRDrGlllaqlgclaaAaedLeaf 55
                    d + ++ rG +++ l  ++ A+ed e +
  MMETSP1325-20131115|10481_1 39 GETDFRPWYIRGACHFALKKYESAVEDCEKA 69
                 5568899999*****************9876 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 8.6e-05
    PF13371.1   4 iylreedferALavverllllaPd.........dpyerRDrGlllaqlgclaaAaedLeaflelcpd 61 
                  +++ +++ ++ALa ++r l l+P            + +   Gl+l+  g++ + ++ ++a++++ pd
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDRALSLQPGidnprmveeKRHAVFNKGLALFAKGQMPESIAVMQAMVDQWPD 164
                  678999***************77666666666677777799*********************99886 PP

  == domain 3    score: 13.7 bits;  conditional E-value: 4.2e-05
    PF13371.1   3 aiylreedferALavverllllaPd..dpyerRDrGlllaqlgclaaAaedLeafl.elcpdapd 64 
                  ++++ +ed+   ++ +e  l+ +P+  ++ ++ D G +++ +g+l  A e + + l + +pd+++
  MMETSP1325-20131115|10481_1 174 QLAILQEDWKTGIENLEVALAGNPHpsRANLLFDLGVAYFITGDLDTAKERFKRVLkKMDPDHDH 238
                  789999****************999889****************************766775544 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0    0.0001     0.092       2      28 ..      44      70 ..      43      72 .. 0.92
   2 ?    4.3   0.0      0.04        37      11      32 ..      99     120 ..      97     123 .. 0.88
   3 !    6.2   0.0    0.0095       8.7       3      25 ..     134     156 ..     132     159 .. 0.89
   4 !    9.2   0.0     0.001      0.94       1      29 [.     202     230 ..     202     231 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.0001
                 --TTT---HHHHTT-HHHHHHHHH--- CS
    PF13181.1  2 kayynlGdiYrqlGdydkAkeylekal 28
                 + +y +G +++ l++y++A e  eka 
  MMETSP1325-20131115|10481_1 44 RPWYIRGACHFALKKYESAVEDCEKAF 70
                 569**********************96 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.04
                  HHHTT-HHHHHHHHH---HHHH CS
    PF13181.1  11 YrqlGdydkAkeylekalelkp 32 
                  ++ +G+ d+A++   +al+l p
  MMETSP1325-20131115|10481_1  99 LFTNGQADEALALCDRALSLQP 120
                  6789***************998 PP

  == domain 3    score: 6.2 bits;  conditional E-value: 0.0095
                  -TTT---HHHHTT-HHHHHHHHH CS
    PF13181.1   3 ayynlGdiYrqlGdydkAkeyle 25 
                  a +n+G++++ +G++ ++++ ++
  MMETSP1325-20131115|10481_1 134 AVFNKGLALFAKGQMPESIAVMQ 156
                  669***************99876 PP

  == domain 4    score: 9.2 bits;  conditional E-value: 0.001
                  ---TTT---HHHHTT-HHHHHHHHH---H CS
    PF13181.1   1 akayynlGdiYrqlGdydkAkeylekale 29 
                  a++++ lG +Y+ +Gd d Ake ++++l+
  MMETSP1325-20131115|10481_1 202 ANLLFDLGVAYFITGDLDTAKERFKRVLK 230
                  57899*****************9999987 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.45   4.1e+02       4      21 ..      47      64 ..      46      70 .. 0.85
   2 ?    2.3   0.0      0.28   2.6e+02      13      31 ..     102     120 ..      89     121 .. 0.83
   3 !    9.9   0.0    0.0011      0.99       2      32 ..     134     164 ..     133     164 .. 0.93
   4 !   13.0   0.0   0.00011     0.099       3      32 ..     205     235 ..     203     236 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.45
                 HHHHHHHHHHHHHHHHHH CS
    PF13174.1  4 yklalsyyklgdtdeAle 21
                 y ++ ++++l++++ A+e
  MMETSP1325-20131115|10481_1 47 YIRGACHFALKKYESAVE 64
                 88999****99*****98 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.28
                  HHHHHHHHHHHHHHHHH-T CS
    PF13174.1  13 lgdtdeAlealerlikeyP 31 
                  +g++deAl++ +r ++  P
  MMETSP1325-20131115|10481_1 102 NGQADEALALCDRALSLQP 120
                  46********999998877 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.0011
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
    PF13174.1   2 AlyklalsyyklgdtdeAlealerlikeyPd 32 
                  A ++ +l++++ g+  e++++++  +++ Pd
  MMETSP1325-20131115|10481_1 134 AVFNKGLALFAKGQMPESIAVMQAMVDQWPD 164
                  66999******99****************98 PP

  == domain 4    score: 13.0 bits;  conditional E-value: 0.00011
                  HHHHHHHHHHHHHHHHHHHHHHHHHHH.-TT CS
    PF13174.1   3 lyklalsyyklgdtdeAlealerlike.yPd 32 
                  l+ l+ +y+ +gd d A+e ++r++k+  Pd
  MMETSP1325-20131115|10481_1 205 LFDLGVAYFITGDLDTAKERFKRVLKKmDPD 235
                  799*******99*************986666 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0012       1.1      12      65 ..      31      82 ..      21      99 .. 0.65
   2 !   10.2   0.0   0.00061      0.55       2      82 ..     102     190 ..     101     192 .. 0.73
   3 !    7.0   0.0     0.006       5.5       3      72 ..     180     250 ..     178     252 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0012
                 HHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHCTSHCHCBHHHHHHHH CS
    PF12895.2 12 aekllaespkdpedaylyalAlclylngeykrAyellrkleldssslgcryllA 65
                 a ++++    +++   +y  + c++ +++y++A+e ++k  +    +  + l++
  MMETSP1325-20131115|10481_1 31 ATQMIEFMG-ETDFRPWYIRGACHFALKKYESAVEDCEK-AFAIGGVPESELFG 82
                 555555544.3377789999*************999954.33333345555555 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00061
                  TT-HHHHHHHHHHHCCC-ST.......-HHHH.CHHHHHHHHHH---HHHHHHHHHC..TSHCHCBHHHHHHHHHHHHHTT-HHHHCCCHH CS
    PF12895.2   2 qhnyknAlflaekllaespk.......dpeda.ylyalAlclylngeykrAyellrk..leldssslgcryllArcllklgkydeAiavLe 82 
                  +++ ++Al l++++l+++p        + e+  + ++++l+l+  g+  + + + +    ++ +  + +r  l++ ++ +++++ +i+ Le
  MMETSP1325-20131115|10481_1 102 NGQADEALALCDRALSLQPGidnprmvE-EKRhAVFNKGLALFAKGQMPESIAVMQAmvDQW-PDLISAREGLGQLAILQEDWKTGIENLE 190
                  6899***************987554443.33337777*************999996563333.3335777777777777777777777665 PP

  == domain 3    score: 7.0 bits;  conditional E-value: 0.006
                  T-HHHHHHHHHHHCCC-ST-HHHHCHHHHHHHHHH---HHHHHHHHHC..TSHCHCBHHHHHHHH.HHHHHTT CS
    PF12895.2   3 hnyknAlflaekllaespkdpedaylyalAlclylngeykrAyellrk..leldssslgcryllA.rcllklg 72 
                  +++k+ +  +e +la +p+ + +  l+ l+ +++ +g+ ++A e +++  +++d+ +   + ++A +c ++ +
  MMETSP1325-20131115|10481_1 180 EDWKTGIENLEVALAGNPHPSRANLLFDLGVAYFITGDLDTAKERFKRvlKKMDPDH--DHSIKAiQCIEAIQ 250
                  5677778888999999996434555555******************99998888888..44455448887766 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0         2   1.9e+03      11      33 ..      41      63 ..      38      64 .. 0.87
   2 ?   -0.5   0.0       1.9   1.7e+03      22      33 ..      98     109 ..      97     110 .. 0.85
   3 ?    0.5   0.0      0.88     8e+02      17      28 ..     136     147 ..     134     153 .. 0.84
   4 ?   -1.6   0.0       4.4     4e+03       8      31 ..     161     184 ..     158     187 .. 0.81
   5 !   15.1   0.0     2e-05     0.018       9      34 .]     198     223 ..     189     223 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 2
    PF13431.1 11 nnadaynnLAelllnnGdleeAe 33
                 +++  ++ ++ ++++++++e A 
  MMETSP1325-20131115|10481_1 41 TDFRPWYIRGACHFALKKYESAV 63
                 678899999*********99886 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 1.9
    PF13431.1  22 lllnnGdleeAe 33 
                  +l+ nG+ +eA+
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEAL 109
                  5889******97 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.88
    PF13431.1  17 nnLAelllnnGd 28 
                  +n++++l+++G+
  MMETSP1325-20131115|10481_1 136 FNKGLALFAKGQ 147
                  89*********8 PP

  == domain 4    score: -1.6 bits;  conditional E-value: 4.4
    PF13431.1   8 ldPnnadaynnLAelllnnGdlee 31 
                  + P+   a+  L++l   + d+++
  MMETSP1325-20131115|10481_1 161 QWPDLISAREGLGQLAILQEDWKT 184
                  678888999999999999999887 PP

  == domain 5    score: 15.1 bits;  conditional E-value: 2e-05
    PF13431.1   9 dPnnadaynnLAelllnnGdleeAeq 34 
                  +P  a++++ L+++++  Gdl++A++
  MMETSP1325-20131115|10481_1 198 HPSRANLLFDLGVAYFITGDLDTAKE 223
                  5999********************85 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.063        58       6      28 ..      50      70 ..      46      81 .. 0.84
   2 ?    2.3   0.0      0.18   1.6e+02      10      33 ..     100     121 ..      96     125 .. 0.76
   3 !    9.2   0.0    0.0011         1       2      31 ..     205     235 ..     204     239 .. 0.85
   4 ?   -2.1   0.0       4.4     4e+03      10      22 ..     294     306 ..     290     310 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.063
    PF13176.1  6 arlysrlgdyekAielyeraLal 28
                 + ++++l +ye A+e +e+  a+
  MMETSP1325-20131115|10481_1 50 GACHFALKKYESAVEDCEK--AF 70
                 568999************9..54 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.18
    PF13176.1  10 srlgdyekAielyeraLaltkdpl 33 
                  +  g+ ++A+ l+ r  al   p+
  MMETSP1325-20131115|10481_1 100 FTNGQADEALALCDR--ALSLQPG 121
                  556999*********..6666655 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.0011
    PF13176.1   2 llnLarlysrlgdyekAielyeraL.altkd 31 
                  l+ L+++y+  gd ++A e ++r L +++ d
  MMETSP1325-20131115|10481_1 205 LFDLGVAYFITGDLDTAKERFKRVLkKMDPD 235
                  678********************88777665 PP

  == domain 4    score: -2.1 bits;  conditional E-value: 4.4
    PF13176.1  10 srlgdyekAiely 22 
                  ++lg+ e++ie++
  MMETSP1325-20131115|10481_1 294 RALGYSEDLIEIL 306
                  5688999999876 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.27   2.5e+02       9      31 ..      50      72 ..      50      72 .. 0.85
   2 !    7.9   0.0    0.0029       2.6      11      31 ..      98     118 ..      97     119 .. 0.91
   3 ?   -3.0   0.0         8   7.3e+03       9      25 ..     139     155 ..     137     158 .. 0.76
   4 ?    3.9   0.0     0.051        46       7      29 ..     207     229 ..     202     231 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.27
    PF13374.1  9 AlalrargryeeAlaleeealai 31
                 +  ++a+++ye A++  e+a ai
  MMETSP1325-20131115|10481_1 50 GACHFALKKYESAVEDCEKAFAI 72
                 56799********9999888876 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.0029
    PF13374.1  11 alrargryeeAlaleeealai 31 
                  +l++ g+ +eAlal  +al++
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDRALSL 118
                  79999*************986 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 8
    PF13374.1   9 AlalrargryeeAlale 25 
                  +lal+a g+  e  a +
  MMETSP1325-20131115|10481_1 139 GLALFAKGQMPESIAVM 155
                  89999999988876655 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.051
    PF13374.1   7 nLAlalrargryeeAlaleeeal 29 
                  +L++a++ +g+++ A + + ++l
  MMETSP1325-20131115|10481_1 207 DLGVAYFITGDLDTAKERFKRVL 229
                  79*************98877776 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.027        24      10      26 .]      98     114 ..      97     114 .. 0.87
   2 ?    6.0   0.0     0.019        17       4      22 ..     205     223 ..     202     227 .. 0.86

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.027
                  HHHH-------HHHHHT CS
    PF07721.9  10 allalGdldeAraller 26 
                  +l+  G++deA+al +r
  MMETSP1325-20131115|10481_1  98 VLFTNGQADEALALCDR 114
                  67889********9986 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.019
                  H---HHHHHH-------HH CS
    PF07721.9   4 llaLArallalGdldeAra 22 
                  l++L+ a++  Gdld+A +
  MMETSP1325-20131115|10481_1 205 LFDLGVAYFITGDLDTAKE 223
                  789**************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      411  (0.0300614); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.78u 0.37s 00:00:01.14 Elapsed: 00:00:00.54
# Mc/sec: 1828.33
//
Query:       MMETSP1325-20131115|10486_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
         10    5.3  28.1         24    4.1  19.5    1.6  1  PF05672.6 MAP7 (E-MAP-115) family


Domain annotation for each model (and alignments):
>> PF05672.6  MAP7 (E-MAP-115) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  19.5    0.0018        24      63     117 ..       9      60 ..       2      62 .] 0.61

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0018
    PF05672.6  63 raaeerlrreeearrreeerarekeeklkrkaeeeekreqeeqeriekqkeeaea 117
                   a+ erlr+eeear + ee+ar k+e+   +a e e+   ee+ r++   e+aea
  MMETSP1325-20131115|10486_1   9 AAEAERLRLEEEARLKAEEEARLKAEE---EAAEAERLRLEEEARLKAEEEAAEA 60 
                  344567888888888888888877777...4444444445555667777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1018  (0.0744587); expected 273.4 (0.02)
Passed bias filter:                      502  (0.0367174); expected 273.4 (0.02)
Passed Vit filter:                        90  (0.0065828); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|10484_1  [L=269]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.9   7.0       0.05   13.8   0.1    2.9  2  PF02176.13 TRAF-type zinc finger
    0.00087   18.9   4.4       0.42   10.3   0.0    3.6  3  PF08600.5  Rsm1-like
  ------ inclusion threshold ------
      0.029   13.9   4.4       0.25   10.8   0.1    2.3  2  PF03145.11 Seven in absentia protein family
      0.064   11.2   7.6       0.36    8.8   0.1    2.0  2  PF03154.10 Atrophin-1 family


Domain annotation for each model (and alignments):
>> PF02176.13  TRAF-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.1   1.5e-05      0.05      37      60 .]     110     133 ..     106     133 .. 0.92
   2 !   10.6   0.2   0.00014      0.48      38      60 .]     165     187 ..     160     187 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.5e-05
                  S----S-....--------HHHHT CS
   PF02176.13  37 revkCkfkevGCkvkvkkealqkh 60 
                   +v C++++ GC+++++ e l+kh
  MMETSP1325-20131115|10484_1 110 YDVVCPYSKAGCECTFPIEMLNKH 133
                  6899*****************999 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00014
                  ----S-....--------HHHHT CS
   PF02176.13  38 evkCkfkevGCkvkvkkealqkh 60 
                  ev C+++  GC+++++++ l+ h
  MMETSP1325-20131115|10484_1 165 EVVCPNSILGCHHTCPRKLLAAH 187
                  799**************999888 PP

>> PF08600.5  Rsm1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1     0.078   2.7e+02      44      78 ..      28      62 ..      14      79 .. 0.69
   2 !   10.3   0.0   0.00012      0.42      47      69 ..     126     148 ..     115     162 .. 0.79
   3 !    6.8   0.0    0.0015       5.3      50      77 ..     183     210 ..     177     227 .. 0.79

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.078
    PF08600.5 44 vvkrldvleeHreycPwkiakaqkelgkeseakee 78
                 + ++ + ++e +++  w+ + a++e  ++ + ++e
  MMETSP1325-20131115|10484_1 28 TAEQQNEIAEQLKWRDWVVQAAEQERERRMQINSE 62
                 45566778888999999999999888776655544 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00012
    PF08600.5  47 rldvleeHreycPwkiakaqkel 69 
                  ++++l++H+e cP+ + +   e 
  MMETSP1325-20131115|10484_1 126 PIEMLNKHMEVCPFANSSRAAEA 148
                  6899***********98766555 PP

  == domain 3    score: 6.8 bits;  conditional E-value: 0.0015
    PF08600.5  50 vleeHreycPwkiakaqkelgkeseake 77 
                  +l+ H+++cP+ +++  +e+ ++ ++k+
  MMETSP1325-20131115|10484_1 183 LLAAHLDHCPFGSGDLSRESENAMRKKS 210
                  6889*********999999866666555 PP

>> PF03145.11  Seven in absentia protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   7.3e-05      0.25      16      42 ..     113     139 ..     108     143 .. 0.89
   2 ?    4.2   0.4    0.0078        27      17      42 ..     168     193 ..     163     195 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 7.3e-05
   PF03145.11  16 pcknaalgcavrlplqekaeHeescey 42 
                   c +++ gc+ ++p + +++H e c +
  MMETSP1325-20131115|10484_1 113 VCPYSKAGCECTFPIEMLNKHMEVCPF 139
                  699**********************76 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0078
   PF03145.11  17 cknaalgcavrlplqekaeHeescey 42 
                  c n+ lgc+ + p++++a H ++c +
  MMETSP1325-20131115|10484_1 168 CPNSILGCHHTCPRKLLAAHLDHCPF 193
                  9999*******************965 PP

>> PF03154.10  Atrophin-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   2.1    0.0013       4.5     581     633 ..      29      86 ..      20     121 .. 0.61
   2 ?    8.8   0.1    0.0001      0.36     570     615 ..     188     235 ..     177     266 .. 0.73

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0013
   PF03154.10 581 akkreeavekakreaeqkareererekekekerererereaeraa.....kasssshe 633
                  a +++e +e+ k         e+ere+  + + e e+e  aeraa      a  s  +
  MMETSP1325-20131115|10484_1  29 AEQQNEIAEQLKWRDWVVQAAEQERERRMQINSEMEQENLAERAAnqeraLAEMSKEQ 86 
                  6666677776665444444568888887788999999999***996553322223233 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0001
   PF03154.10 570 lyfiplassklakkreeavek.akreaeqkareererekekek.erer 615
                  l   p++s  l++  e+a+ k +   a+q a eerer  +++  ere 
  MMETSP1325-20131115|10484_1 188 LDHCPFGSGDLSRESENAMRKkSGVWAQQVAEEERERRINEDAyEREH 235
                  55689*************976166778998889999876433335554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       979  (0.0716062); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.56
# Mc/sec: 1151.11
//
Query:       MMETSP1325-20131115|10487_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.31   11.0   2.0        0.3   11.1   1.4    1.1  1  PF12583.3 Tripeptidyl peptidase II N terminal


Domain annotation for each model (and alignments):
>> PF12583.3  Tripeptidyl peptidase II N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.4   2.2e-05       0.3       8      50 ..       2      44 ..       1      76 [. 0.78

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 2.2e-05
    PF12583.3  8 saanataaaaaavtanatkpkaaataqaatsvansaaGdgvtt 50
                 +a++ata+ +  vta + +p aaata aa+++   ++G +v +
  MMETSP1325-20131115|10487_1  2 AATAATAGRTVTVTADPLHPAAAATAAAAAAAIGRGGGGSVHS 44
                 56788999999**************998888877777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 354.85
//
Query:       MMETSP1325-20131115|10492_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 524.49
//
Query:       MMETSP1325-20131115|10493_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-08   33.1   0.3    4.9e-05   22.8   0.1    2.2  2  PF00023.25 Ankyrin repeat
      4e-06   26.9   0.1    4.1e-06   26.9   0.0    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
    8.3e-05   22.8   0.0    8.8e-05   22.8   0.0    1.1  1  PF13637.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.015   15.3   0.2       0.89    9.7   0.0    2.1  2  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00045       1.5      16      31 ..      20      35 ..      19      36 .. 0.89
   2 !   22.8   0.1   1.4e-08   4.9e-05       1      26 [.      39      64 .]      39      64 .] 0.99

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00045
                 HHHHHHHHTTSSTTHB CS
   PF00023.25 16 evvklLlsqGAdlnaq 31
                 +++k+L  +GAd n +
  MMETSP1325-20131115|10493_1 20 KCLKDLMARGADCNKR 35
                 699**********986 PP

  == domain 2    score: 22.8 bits;  conditional E-value: 1.4e-08
                 TSCBHHHHHHHTTHHHHHHHHHHTTS CS
   PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGA 26
                 dG+T+L + + rg +++vk+Ll +GA
  MMETSP1325-20131115|10493_1 39 DGMTALAVSSARGMAQCVKYLLACGA 64
                 8************************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.2e-09   4.1e-06      39      83 ..      19      64 .]       2      64 .] 0.85

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 1.2e-09
    PF12796.2 39 leivklLleagadvnakd.kegntpLhlAvrnghlelvklLlekga 83
                 l+++k L+++gad+n +  ++g+t+L +    g + +vk+Ll  ga
  MMETSP1325-20131115|10493_1 19 LKCLKDLMARGADCNKRGmEDGMTALAVSSARGMAQCVKYLLACGA 64
                 4899999999999999999999999999999999999999998775 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   2.6e-08   8.8e-05      14      54 .]      19      60 ..       2      60 .. 0.91

  Alignments for each domain:
  == domain 1    score: 22.8 bits;  conditional E-value: 2.6e-08
    PF13637.1 14 lelvklLlekgidinrt.desGntaLhiAalrgnieilklLl 54
                 l+++k L ++g+d+n++  e+G+taL +   rg  +++k+Ll
  MMETSP1325-20131115|10493_1 19 LKCLKDLMARGADCNKRgMEDGMTALAVSSARGMAQCVKYLL 60
                 67899999*********77**********************8 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.015        51      31      46 ..      21      36 ..      19      39 .. 0.83
   2 ?    9.7   0.0   0.00026      0.89      15      36 ..      39      60 ..      37      64 .] 0.90

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.015
    PF13857.1 31 vvrlLlapgadlnlrd 46
                 +++ L a+gad+n r 
  MMETSP1325-20131115|10493_1 21 CLKDLMARGADCNKRG 36
                 788899*******986 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00026
    PF13857.1 15 ggntpLhlAakggalevvrlLl 36
                  g+t+L +   +g +++v++Ll
  MMETSP1325-20131115|10493_1 39 DGMTALAVSSARGMAQCVKYLL 60
                 699******************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|10496_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|10497_1  [L=402]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-44  149.0   0.0    9.9e-44  148.1   0.0    1.5  1  PF02965.12 Vitamin B12 dependent methionine synthase, activation domain


Domain annotation for each model (and alignments):
>> PF02965.12  Vitamin B12 dependent methionine synthase, activation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.1   0.0   7.3e-48   9.9e-44       1     136 []     175     311 ..     175     311 .. 0.98

  Alignments for each domain:
  == domain 1    score: 148.1 bits;  conditional E-value: 7.3e-48
                  -EEE----EEE-ETHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT.S---TT----HHHHHTT-----------TTS--CCHHHHHHHHCT.HHH---EE-TTS-EESSSEE-------TT------ CS
   PF02965.12   1 sdvlglfavtlGeeveelikelfakgddtkailvdalgsalaEalaeelhkrlrke.wgysekenleitdllkerYqGiryspGYpawPdlteqakllelle.eeriGvklteslalvPeksvsglvgihpaakyfav 136
                  +d+lg+fav++ +++eel+ ++++++dd+++i+ +al+++l+Ea+ae +hk++r++ wgy+ +e+++ +dllk +Y Gir++pGYp++Pd++e+ ++++l++ +e  G++l+++l ++P++svs+lv++hp+++yfav
  MMETSP1325-20131115|10497_1 175 ADHLGMFAVSC-FGAEELAAKYESENDDYRKIMAQALADRLVEAFAEAVHKDMRTKtWGYAPDEAMDAKDLLKVKYDGIRPAPGYPSQPDHSEKSTMWDLIQaKELAGIELSDTLSMMPASSVSALVFAHPKSQYFAV 311
                  589********.******************************************************************************************88999*****************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.54
# Mc/sec: 1783.95
//
Query:       MMETSP1325-20131115|10495_1  [L=372]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.57
# Mc/sec: 1536.97
//
Query:       MMETSP1325-20131115|10498_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|10499_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|10500_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        66  (0.00482738); expected 273.4 (0.02)
Passed bias filter:                       63  (0.00460796); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|10488_1  [L=538]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3132  (0.229081); expected 273.4 (0.02)
Passed bias filter:                      540  (0.0394968); expected 273.4 (0.02)
Passed Vit filter:                       167  (0.0122147); expected 13.7 (0.001)
Passed Fwd filter:                        56  (0.00409596); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 2.24u 0.41s 00:00:02.65 Elapsed: 00:00:01.51
# Mc/sec: 853.80
//
Query:       MMETSP1325-20131115|10501_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-45  153.8   0.1    4.7e-45  153.6   0.0    1.0  1  PF00225.18 Kinesin motor domain


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.6   0.0   3.4e-49   4.7e-45     236     335 .]       2      99 ..       1      99 [. 0.97

  Alignments for each domain:
  == domain 1    score: 153.6 bits;  conditional E-value: 3.4e-49
                  EEE----CCG----.---H-SHHHHHHHHHHHHHHHHHHHHHHT.TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
   PF00225.18 236 LvDLAGsErasktgaaeerrlkEaanINkSLlaLgrvIsaLaenkkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerakni 335
                  LvDLAGsEr+sktga +++rlkEa++IN SL+aLg+vIsaL +  ks+h+pYRdSkLTrlLqdsLggn+kt+m +++ p+  n++et+stLr+a+rakni
  MMETSP1325-20131115|10501_1   2 LVDLAGSERQSKTGA-TGDRLKEATKINLSLSALGNVISALVDG-KSQHIPYRDSKLTRLLQDSLGGNTKTVMCANCGPAGYNYDETVSTLRYANRAKNI 99 
                  9*************6.5777************************.*****************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|10502_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-10   40.7   0.0    3.3e-10   39.4   0.0    1.6  1  PF00085.15 Thioredoxin
     0.0091   16.0   0.0       0.87    9.6   0.0    2.5  2  PF13905.1  Thioredoxin-like
  ------ inclusion threshold ------
       0.01   14.4   0.0      0.019   13.6   0.0    1.3  1  PF02114.11 Phosducin
      0.039   14.0   0.1      0.048   13.7   0.1    1.3  1  PF09234.5  Domain of unknown function (DUF1963)
      0.083   12.6   0.0       0.16   11.7   0.0    1.5  1  PF07449.6  Hydrogenase-1 expression protein HyaE
        0.1   12.4   0.0       0.18   11.6   0.0    1.3  1  PF07912.8  ERp29, N-terminal domain
       0.11   12.6   0.0       0.26   11.3   0.0    1.7  1  PF13098.1  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   1.7e-13   3.3e-10      22     103 ..      81     164 ..      77     165 .. 0.88

  Alignments for each domain:
  == domain 1    score: 39.4 bits;  conditional E-value: 1.7e-13
                  EEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETTTT..HHHHHHTT--SSSEEEEESSSSEEEEE---..-HHHHHHHHHH CS
   PF00085.15  22 lvefyApwCGhCkalaPeyeklaeelkekvvlakvdvden..kdlaseygvegiPtlklfkngkkveevega.rekeklvaflkk 103
                  l  f   w   C+ + P++e+la ++  +v ++ + +d    + ++++y+ve +Pt++lf+++++ ++v+g+ r+ ++l+++lk+
  MMETSP1325-20131115|10502_1  81 LASFQVLWSKDCQTIMPTIEELAPNYP-TVRFVTIRADRVgvDAISRKYKVEEFPTIVLFRGDQELTRVVGPeRTVHHLTDALKA 164
                  6678889999*****************.88888887775533999**************************98999999988876 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00044      0.87       7      46 ..      83     118 ..      79     124 .. 0.88
   2 ?    3.6   0.0     0.033        64      74      94 ..     123     143 ..     120     145 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00044
    PF13905.1   7 yfaaswcppckaftpelkelyeklkaskdkveivyVsldr 46 
                   f   w+++c+ ++p+++el  ++      v++v + +dr
  MMETSP1325-20131115|10502_1  83 SFQVLWSKDCQTIMPTIEELAPNYP----TVRFVTIRADR 118
                  57778*******************6....9*****99997 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.033
    PF13905.1  74 klkklykvkaiPtlvvldkdg 94 
                  ++ ++ykv+++Pt+v+   d 
  MMETSP1325-20131115|10502_1 123 AISRKYKVEEFPTIVLFRGDQ 143
                  5789***********998775 PP

>> PF02114.11  Phosducin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   9.5e-06     0.019     161     215 ..      92     149 ..      89     174 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 9.5e-06
   PF02114.11 161 tealnssliclaaeyptvkfckvkasviga...sdrfsrdvlpallvykagellsnfv 215
                  ++++  ++  la +yptv+f  ++a  +g    s ++  + +p+++++++ + l+  v
  MMETSP1325-20131115|10502_1  92 CQTIMPTIEELAPNYPTVRFVTIRADRVGVdaiSRKYKVEEFPTIVLFRGDQELTRVV 149
                  66666777789***************99953336679999********9987766555 PP

>> PF09234.5  Domain of unknown function (DUF1963)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.5e-05     0.048     111     175 ..     164     240 ..      97     280 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.5e-05
                  E---TTSTTHHHH----HHHH--..---HHHHHHHHHH..----...-EE------SS--S-TTTT........... CS
    PF09234.5 111 epvsedavrfeqevesetlelee..eeedeeafeelydelaeegerrsklgGypsftQedpreaee..........p 175
                    ++  +v+++++v+  ++e++   eee+e++ + ++ + ++++++++k+ Gy  ++  +p+ ++e          +
  MMETSP1325-20131115|10502_1 164 ANITDADVEVREAVRAYEIEQNGgeEEEEEAEEDLIWTWDPDYASDNCKVMGYGMIVAMQPEDDIEdnqgkwqkkaN 240
                  567778889999998888887779777777778888888999****************9999999975555444444 PP

>> PF07449.6  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.2e-05      0.16      45      96 ..      91     146 ..      55     150 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 8.2e-05
    PF07449.6  45 DvaVvlp...ELlkafpqalraavva.reqeealaerfgvlrlPsllflrdgeylg 96 
                  D   ++p   EL  ++p     ++ a r   +a+ ++++v  +P+++++r+++ l 
  MMETSP1325-20131115|10502_1  91 DCQTIMPtieELAPNYPTVRFVTIRAdRVGVDAISRKYKVEEFPTIVLFRGDQELT 146
                  55555551114555555444444444566789******************999775 PP

>> PF07912.8  ERp29, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.1e-05      0.18      72      98 ..     123     147 ..     117     171 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.1e-05
                  ----TT---CCC-SEEEEE---TTSEE CS
    PF07912.8  72 elgerykvdkesyPviflfkGdaeepv 98 
                  +++++ykv+  ++P+i lf+Gd e   
  MMETSP1325-20131115|10502_1 123 AISRKYKVE--EFPTIVLFRGDQELTR 147
                  6899***96..59*********87543 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00014      0.26      72     101 ..     122     150 ..      76     162 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00014
    PF13098.1  72 kelgrklgvrgtPtivfldgeGklvarlpG 101
                  +++ rk++v   Ptiv++ g+  +++r++G
  MMETSP1325-20131115|10502_1 122 DAISRKYKVEEFPTIVLFRGDQ-ELTRVVG 150
                  3799**************9985.5667777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       561  (0.0410328); expected 273.4 (0.02)
Passed bias filter:                      432  (0.0315974); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.66u 0.38s 00:00:01.04 Elapsed: 00:00:00.52
# Mc/sec: 1506.94
//
Query:       MMETSP1325-20131115|10503_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       432  (0.0315974); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 836.18
//
Query:       MMETSP1325-20131115|10504_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-26   93.1   0.2    1.7e-26   93.1   0.1    1.6  2  PF01145.20 SPFH domain / Band 7 family
  ------ inclusion threshold ------
      0.037   13.4   0.1      0.067   12.5   0.0    1.4  1  PF13421.1  SPFH domain-Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1   0.1   2.5e-30   1.7e-26      13     176 ..       2     159 ..       1     171 [. 0.94
   2 ?   -2.7   0.8      0.62   4.2e+03     146     176 ..     189     218 ..     184     221 .. 0.50

  Alignments for each domain:
  == domain 1    score: 93.1 bits;  conditional E-value: 2.5e-30
   PF01145.20  13 rfGkvkrvlepGlhfklPfgekvt.vvstrvqtldvsdesvtvptkDglnvtvdvtvryrvsdakkliaavaqeeenlenllrrllesalrevlsqmtldeilsnrselaaelknelneqlqkygievvdvritdvdpppevkqalakkqaaeaeaaeaeiarae 176
                  rfGk++ v  pGl   +P +++++ ++++r   +++ +  ++++tkD++ v v + ++ ++ d+ k+++      +++   +++ ++s++r+++++m+ldeil  r++l+  +k +++e ++ +g+ v++  it+++p++++ +a++k +aae+ + ++++  ae
  MMETSP1325-20131115|10504_1   2 RFGKLHAVQSPGLFVAIPVVDRIAyRIDMRESAIEIAP--QSTITKDNVTVAVSGCIYVQFVDPEKAAYGS----RDPLYAVTQFAQSTMRAAIGEMELDEILHARAQLNTIIKSAVQEGATPWGLNVLRYEITEITPDKTISEAMDKQAAAERLR-REKVLGAE 159
                  8*****************9999999*************..*******************************....******************************************************************************999.55544444 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.62
   PF01145.20 146 dvdpppevkqalakkqaaeaeaaeaeiarae 176
                  +++  +++k++l++   a a + ++++a+ae
  MMETSP1325-20131115|10504_1 189 NASEAEKIKRQLEADGDASAIL-VKAKAQAE 218
                  4444455555555555555544.55544444 PP

>> PF13421.1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   9.8e-06     0.067     158     209 ..      96     147 ..      74     149 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9.8e-06
    PF13421.1 158 dlaanseelseklreaikkelaeyGleleellienislpeevekaldkrssm 209
                  ++  + ++l++ +++a+++  +  Gl++ + +i +i  ++++ +a+dk++++
  MMETSP1325-20131115|10504_1  96 EILHARAQLNTIIKSAVQEGATPWGLNVLRYEITEITPDKTISEAMDKQAAA 147
                  44567789****************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       497  (0.0363517); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 1115.04
//
Query:       MMETSP1325-20131115|10505_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.008   16.1   0.0      0.008   16.1   0.0    1.1  1  PF05641.7 Agenet domain


Domain annotation for each model (and alignments):
>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   5.8e-07     0.008      17      49 ..      14      46 ..       1      51 [] 0.82

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 5.8e-07
    PF05641.7 17 rgaWfrAkVlkelkeskykveyddlsledgesk 49
                 +  W+++kV  ++++ +y + ydd ++e+  ++
  MMETSP1325-20131115|10505_1 14 GQRWYPGKVAVVNDDGTYAIHYDDGDKEQKVKP 46
                 556***********************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 235.03
//
Query:       MMETSP1325-20131115|10506_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-05   23.9   0.0    3.1e-05   23.9   0.0    1.1  1  PF13499.1  EF-hand domain pair
    9.4e-05   21.3   0.4    0.00013   20.9   0.0    1.5  2  PF00036.27 EF hand
    0.00012   21.5   0.0    0.00016   21.1   0.0    1.4  1  PF13405.1  EF-hand domain
    0.00077   18.5   1.1     0.0009   18.3   0.0    1.6  2  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   9.1e-09   3.1e-05       1      33 [.       3      35 ..       3      56 .. 0.85

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 9.1e-09
    PF13499.1  1 klkeaFkllDkdgdgyldkeeLlrllkhlgsel 33
                 +l+ aF+++D +gdgyl+++e ++++++l+   
  MMETSP1325-20131115|10506_1  3 RLRLAFEAFDLSGDGYLEVDEARAMAQALSRAV 35
                 57789**********************998655 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   3.8e-08   0.00013       2      27 ..       4      29 ..       3      31 .. 0.89
   2 ?   -3.4   0.1       2.1   7.2e+03      10      14 ..      53      57 ..      52      57 .. 0.57

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 3.8e-08
                 HHHHHHHHCTTTSSEBEHHHHHHHHH CS
   PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealk 27
                 l+ aF+ fD  gdG+++++E +++ +
  MMETSP1325-20131115|10506_1  4 LRLAFEAFDLSGDGYLEVDEARAMAQ 29
                 7889****************999876 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 2.1
                 CTTTS CS
   PF00036.27 10 DkDgd 14
                 D D d
  MMETSP1325-20131115|10506_1 53 DADAD 57
                 66655 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   4.7e-08   0.00016       1      27 [.       3      29 ..       3      46 .. 0.88

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 4.7e-08
                 HHH---GCC-------B---HHHHHHH CS
    PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLr 27
                 +lr aF++fD  gdG+++ +E r++ +
  MMETSP1325-20131115|10506_1  3 RLRLAFEAFDLSGDGYLEVDEARAMAQ 29
                 5889*****************999765 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   2.6e-07    0.0009       4      24 ..       7      27 ..       4      28 .. 0.88
   2 ?   -2.0   0.1       0.7   2.4e+03       8      13 ..      52      57 ..      51      57 .. 0.63

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 2.6e-07
                 HHHHH--S----B-HHHHHHH CS
    PF13202.1  4 tFrafDlNgDGkIsreELkrl 24
                 +F+afDl gDG +  +E +++
  MMETSP1325-20131115|10506_1  7 AFEAFDLSGDGYLEVDEARAM 27
                 5****************9886 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.7
                 H--S-- CS
    PF13202.1  8 fDlNgD 13
                 +D++ D
  MMETSP1325-20131115|10506_1 52 VDADAD 57
                 577765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|10507_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-06   28.0   0.0    1.6e-06   27.7   0.0    1.1  1  PF13621.1  Cupin-like domain
    0.00021   21.3   0.1    0.00082   19.4   0.0    1.8  1  PF02373.17 JmjC domain, hydroxylase
     0.0018   17.4   0.0     0.0026   16.9   0.0    1.2  1  PF08007.7  Cupin superfamily protein
  ------ inclusion threshold ------
      0.013   14.8   0.0      0.016   14.5   0.0    1.2  1  PF07731.9  Multicopper oxidase


Domain annotation for each model (and alignments):
>> PF13621.1  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   4.5e-10   1.6e-06     123     227 ..       7     104 ..       2     121 .. 0.81

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 4.5e-10
    PF13621.1 123 elfgkkpeavnlWlGnsasssslHhDhyeNlycvvsGrKrftLfppsdapklyvasleesgtsvssvdvenpdlekfprfkdakalevelepGevLYlPalWfHe 227
                  ++fg + ++++++lG+ +s    H+ h + + ++  G Kr+ L+ ps+a + ++       +++    +++ +  + + +   + le+  ++G+v+++P+lW H 
  MMETSP1325-20131115|10507_1   7 HAFGGS-QETQFFLGPAGSGAPVHY-HGHAVNVLAYGAKRWKLMAPSHAFYSKMPA-----EEFYLSRIAEGNATESTGLGSPHELECMQYAGDVMFVPTLWGHG 104
                  567764.789***************.556899999************998887555.....3555556666666677777777*******************995 PP

>> PF02373.17  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   2.4e-07   0.00082       2     114 .]      17     118 ..      16     118 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 2.4e-07
                  EEEE-TT-EE-CE--GGG-EEEEEEEEE-EEEEEEE-TTCHHHHHHHHCH-.HH---TTGHHCCHCCCHHHHHHHCCG--EEEEE----EEEE----EEEEEEEEEEEEEEEEE CS
   PF02373.17   2 lylgmpksttpwhiedqglySinylhfgapkvWyivpsekkeklekvlskk.nskeqpdllrhlstlispkqlekagipvyrfvqkpgefVfvfpgayHsvfnlgfniaeavnf 114
                  ++lg+ +s  p+h    + +++n+l +ga++ W+++ ++++   +  +++   s+ +++  ++ + l sp++l        ++ q +g+++fv++ + H ++n+  +i +a +f
  MMETSP1325-20131115|10507_1  17 FFLGPAGSGAPVHY---HGHAVNVLAYGAKR-WKLMAPSHAFYSKMPAEEFyLSRIAEGNATESTGLGSPHEL--------ECMQYAGDVMFVPTLWGHGTLNTLQSIGTAYEF 118
                  67788888888884...67779999999987.99999999877765555555555666678999999999999........799********************9999988776 PP

>> PF08007.7  Cupin superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   7.6e-07    0.0026     118     196 ..      17     105 ..      10     123 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 7.6e-07
                  EEEE--------SEE-SSEEEEEEEE--EEEEEE-........-SSTT-SS-.....EE--TTT--..--SE.EEEE----EEEE----EEEE CS
    PF08007.7 118 vYatpggsqgvgpHyDdyDVfllQleGrkrWrvyk........ptvpelelk.....seeplkildefepve.dfvLepGDlLYlPrgviHqg 196
                   ++ p+g +g + Hy  + V +l ++G krW++ +        +  p +e++     + ++++  +  +p+e + +  +GD++++P  + H  
  MMETSP1325-20131115|10507_1  17 FFLGPAG-SGAPVHYHGHAVNVL-AYGAKRWKLMApshafyskM--PAEEFYlsriaEGNATESTGLGSPHElECMQYAGDVMFVPTLWGHGT 105
                  5789999.9************99.89*********999999551..443333111113334444454577772555569********999965 PP

>> PF07731.9  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   4.8e-06     0.016      56      80 ..      26      50 ..       8      73 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 4.8e-06
                 EEEEESSEEEEEEEEE-B-HCCHTB CS
    PF07731.9 56 HPfHlHGhdfqvlgqgggpwdpdsr 80
                  P+H HGh + vl++g ++w+   +
  MMETSP1325-20131115|10507_1 26 APVHYHGHAVNVLAYGAKRWKLMAP 50
                 6******************965544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 616.21
//
Query:       MMETSP1325-20131115|10509_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|10508_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0029   17.2   5.7     0.0045   16.6   3.9    1.5  1  PF07716.10 Basic region leucine zipper
     0.0048   16.4   1.1     0.0079   15.7   0.5    1.6  1  PF02183.13 Homeobox associated leucine zipper
     0.0088   15.5   4.8      0.087   12.3   0.6    2.1  2  PF12041.3  Transcriptional regulator DELLA protein N terminal
  ------ inclusion threshold ------
      0.012   15.1   3.5      0.012   15.0   2.4    1.0  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
      0.013   15.0   2.2      0.014   15.0   1.5    1.1  1  PF10805.3  Protein of unknown function (DUF2730)
      0.019   14.2   3.2      0.023   14.0   2.0    1.3  1  PF04977.10 Septum formation initiator
      0.036   13.5   1.6      0.043   13.3   1.1    1.2  1  PF04156.9  IncA protein
      0.036   13.6   1.2       0.36   10.4   0.1    2.2  2  PF07558.6  Shugoshin N-terminal coiled-coil region
       0.04   13.3   0.9       0.11   11.9   0.6    1.8  1  PF06825.7  Heat shock factor binding protein 1
      0.046   12.8   6.0      0.044   12.8   4.2    1.0  1  PF13851.1  Growth-arrest specific micro-tubule binding
      0.049   13.3   6.0      0.029   14.0   2.8    1.7  1  PF06698.6  Protein of unknown function (DUF1192)
      0.052   12.6   1.2      0.056   12.5   0.8    1.0  1  PF12017.3  Transposase protein
      0.071   12.4   4.0      0.076   12.3   2.8    1.1  1  PF13870.1  Domain of unknown function (DUF4201)
      0.098   12.9   5.3       0.11   12.7   3.6    1.2  1  PF07361.6  Cytochrome b562
       0.11   12.4   0.5       0.11   12.4   0.3    1.0  1  PF14071.1  Putative coat protein
       0.13   11.1   4.8       0.12   11.2   3.3    1.0  1  PF04849.8  HAP1 N-terminal conserved region
       0.14   11.7   3.1       0.18   11.4   1.8    1.4  1  PF07544.8  RNA polymerase II transcription mediator complex subunit 9
       0.15   11.7   2.7       0.17   11.5   1.9    1.2  1  PF07439.6  Protein of unknown function (DUF1515)
       0.15   11.8   4.1        0.7    9.7   2.6    1.9  2  PF05377.6  Flagella accessory protein C (FlaC)
       0.16   11.6   7.0       0.18   11.4   4.9    1.0  1  PF06102.7  Domain of unknown function (DUF947)
       0.16   11.4  13.2       0.16   11.4   9.2    1.0  1  PF00769.14 Ezrin/radixin/moesin family
       0.16   11.8   5.8       0.39   10.6   3.7    1.8  2  PF00170.16 bZIP transcription factor
       0.19   12.0   2.5       0.22   11.7   1.8    1.3  1  PF06156.8  Protein of unknown function (DUF972)
        0.2   11.8   5.0       0.21   11.7   3.0    1.6  2  PF06005.7  Protein of unknown function (DUF904)
       0.25   11.3   2.7       0.26   11.2   1.8    1.0  1  PF08706.6  D5 N terminal like
       0.28   10.8   6.0       0.28   10.8   4.1    1.2  1  PF10211.4  Axonemal dynein light chain
       0.29   10.6   6.0       0.28   10.6   4.1    1.0  1  PF03962.10 Mnd1 family
        0.3   11.2   5.2       0.38   10.9   3.6    1.3  1  PF08232.7  Striatin family
       0.32   10.8   6.2       0.33   10.8   4.3    1.1  1  PF10146.4  Zinc finger-containing protein
       0.39   10.3   4.0       0.28   10.8   1.2    1.7  2  PF10552.4  ORF6C domain
       0.45   10.8   5.7       0.47   10.8   3.9    1.1  1  PF13600.1  N-terminal domain of unknown function (DUF4140)
       0.82    8.0   3.0       0.76    8.1   2.1    1.0  1  PF11853.3  Protein of unknown function (DUF3373)
       0.87    8.3   6.3       0.81    8.4   4.3    1.0  1  PF04111.7  Autophagy protein Apg6
        1.8    8.4   6.7        1.9    8.3   4.7    1.1  1  PF08432.5  Fungal protein of unknown function (DUF1742)
        1.9    6.7   7.7        1.9    6.7   5.4    1.0  1  PF05667.6  Protein of unknown function (DUF812)
        2.3    7.3  10.1        2.5    7.3   7.0    1.0  1  PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
        2.5    7.5   8.9        2.5    7.5   6.2    1.0  1  PF05266.9  Protein of unknown function (DUF724)
        4.2    6.9   7.2        4.3    6.9   5.0    1.1  1  PF11500.3  Spindle-body formation-associated protein
        4.4    6.6   6.6        4.2    6.6   4.6    1.0  1  PF05529.7  B-cell receptor-associated protein 31-like


Domain annotation for each model (and alignments):
>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   3.9   1.3e-05    0.0045      23      54 .]      20      51 ..       7      51 .. 0.95

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1.3e-05
   PF07716.10 23 kkakeeeleervkeLeeeNaqLrqkveqLeke 54
                  + ++ee++e+++ Le+e a+Lr +v +L++e
  MMETSP1325-20131115|10508_1 20 ERVEKEEMAEKIETLEKEVAELRGEVTKLKNE 51
                 6899**************************98 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.5   2.3e-05    0.0079      17      40 ..      27      50 ..      25      55 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.3e-05
   PF02183.13 17 LkaendsLqkEkekLraevlsLke 40
                  +++ + L+kE+++Lr ev++Lk+
  MMETSP1325-20131115|10508_1 27 MAEKIETLEKEVAELRGEVTKLKN 50
                 578899****************97 PP

>> PF12041.3  Transcriptional regulator DELLA protein N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.6   0.00025     0.087      10      28 ..       9      27 ..       4      28 .. 0.90
   2 !    8.0   0.5    0.0055       1.9      17      44 ..      25      51 ..      23      59 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00025
                 B--GGGHHHHHHHHHHHHH CS
    PF12041.3 10 kVrssdmadvAqkLEqLet 28
                 +Vr s+ma++A+++E+ e+
  MMETSP1325-20131115|10508_1  9 EVRESEMAEMAERVEKEEM 27
                 69*************9887 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0055
                 HHHHHHHHHHHHHHTT---------HCC CS
    PF12041.3 17 advAqkLEqLetvlgaaqedgishlssd 44
                 +++A+k+E Le+ +++ + + +++l ++
  MMETSP1325-20131115|10508_1 25 EEMAEKIETLEKEVAELRGE-VTKLKNE 51
                 79*********988866544.5555555 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   2.4   3.4e-05     0.012      96     139 ..       9      52 ..       2      61 .] 0.82

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 3.4e-05
    PF07106.8  96 selekelkkLtseltteelleeiqelkkeveeieekLeslkean 139
                  +  e+e+ ++ +  ++ee+ e+i++l+kev+e + ++++lk++ 
  MMETSP1325-20131115|10508_1   9 EVRESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKNEK 52 
                  55578999999999********************9999999865 PP

>> PF10805.3  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   1.5     4e-05     0.014      41      86 ..       5      50 ..       1      59 [. 0.88

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 4e-05
    PF10805.3 41 vekieendkrlseletkleslPtakdvhaLkieltelrGelkelsa 86
                 +e++e ++  ++e+  ++e+   a++++ L++e++elrGe+ +l++
  MMETSP1325-20131115|10508_1  5 AEAAEVRESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKN 50
                 4667889999******************************999876 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   2.0   6.7e-05     0.023      24      56 ..      22      54 ..      12      60 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 6.7e-05
   PF04977.10 24 qeiaalqaelaklkaeneeLeaevkdLksdedy 56
                  e ++  +++++l++e +eL  ev +Lk+++ +
  MMETSP1325-20131115|10508_1 22 VEKEEMAEKIETLEKEVAELRGEVTKLKNEKMA 54
                 577888999999999999999999999755544 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.1   0.00012     0.043      88     119 ..      22      53 ..       3      60 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.00012
    PF04156.9  88 sqlseleeeleqleerlaeleseledleedle 119
                   +  e++e++e+le+++ael +e+++l++++ 
  MMETSP1325-20131115|10508_1  22 VEKEEMAEKIETLEKEVAELRGEVTKLKNEKM 53 
                  44566777777777777777777777777665 PP

>> PF07558.6  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1     0.026       9.2      22      34 ..      30      42 ..      27      44 .. 0.89
   2 ?   10.4   0.1     0.001      0.36      23      39 ..      38      54 ..      37      54 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.026
    PF07558.6 22 kiselekevskLl 34
                 ki +lekev +L+
  MMETSP1325-20131115|10508_1 30 KIETLEKEVAELR 42
                 899*********8 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.001
    PF07558.6 23 iselekevskLlnENvn 39
                 + el+ ev+kL+nE+++
  MMETSP1325-20131115|10508_1 38 VAELRGEVTKLKNEKMA 54
                 668999********995 PP

>> PF06825.7  Heat shock factor binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.6   0.00033      0.11      32      50 ..      26      44 ..      13      48 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00033
    PF06825.7 32 eMgkriDdLEksvsdlmnd 50
                 eM+++i+ LEk v +l  +
  MMETSP1325-20131115|10508_1 26 EMAEKIETLEKEVAELRGE 44
                 9************999765 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   4.2   0.00012     0.044      42      88 ..       7      55 ..       1      61 [] 0.82

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 0.00012
    PF13851.1 42 keekneklmaeikk..enkrlkepLkkaeeeveeLkkklkqyekdkqsL 88
                  +e +e++mae+++  e++++ e+++++e+ev+eL+ ++ + +++k++ 
  MMETSP1325-20131115|10508_1  7 AAEVRESEMAEMAErvEKEEMAEKIETLEKEVAELRGEVTKLKNEKMAA 55
                 55667889999987446899************************99975 PP

>> PF06698.6  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   2.8   8.3e-05     0.029      24      54 ..      25      55 ..      11      57 .. 0.95

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 8.3e-05
    PF06698.6 24 eELeeRIalLqaEIaRleaalakkkasraAA 54
                 eE++e+I+ L++E+a l+ +++k k+ + AA
  MMETSP1325-20131115|10508_1 25 EEMAEKIETLEKEVAELRGEVTKLKNEKMAA 55
                 8***************************999 PP

>> PF12017.3  Transposase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.8   0.00016     0.056       7      45 ..      11      49 ..       5      58 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00016
    PF12017.3  7 teekvinkaillenkslrkkiralekelkslrqqleesk 45
                  e+++ + a ++e++++ +ki++leke+ +lr ++ + k
  MMETSP1325-20131115|10508_1 11 RESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLK 49
                 46666777889*********************9987765 PP

>> PF13870.1  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.8   0.00022     0.076      88     129 ..      19      60 ..       4      61 .] 0.81

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00022
    PF13870.1  88 fleeeleelkkelkekeeklaklrkelykvklerdklrkenk 129
                  + + e ee+ ++++++e++ a+lr e++k+k e+  +  + +
  MMETSP1325-20131115|10508_1  19 AERVEKEEMAEKIETLEKEVAELRGEVTKLKNEKMAAAVQAN 60 
                  55668999*************************988877665 PP

>> PF07361.6  Cytochrome b562
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   3.6   0.00032      0.11       4      46 ..      12      55 ..       8      61 .] 0.89

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00032
    PF07361.6  4 keeMkqmklnykqaakaddaeelkealnklrsaaedakkkk.pp 46
                 ++eM +m++ +++   a+ +e+l++++++lr  + + k++k   
  MMETSP1325-20131115|10508_1 12 ESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKNEKmAA 55
                 579***********************************998444 PP

>> PF14071.1  Putative coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3    0.0003      0.11      65     110 ..      10      55 ..       1      61 [] 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.0003
    PF14071.1  65 dlleklvelvkkldvnelqehlnklsqaissvqellqqfqeekekk 110
                     ++++e+ ++++ +e+ e+++ l++ ++ ++  ++++++ek   
  MMETSP1325-20131115|10508_1  10 VRESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKNEKMAA 55 
                  455789***************************9999999888665 PP

>> PF04849.8  HAP1 N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.3   0.00034      0.12     148     193 ..      10      54 ..       1      61 [] 0.75

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00034
    PF04849.8 148 lrakeskseaskafqleaLqeklkdleeeNerLrseashlkeetat 193
                    ++ ++ e  +  + e + ek+  le+e  +Lr e ++lk+e + 
  MMETSP1325-20131115|10508_1  10 V-RESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKNEKMA 54 
                  3.3344456667778899***********************99764 PP

>> PF07544.8  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.8    0.0005      0.18      54      81 ..      24      51 ..      13      53 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0005
    PF07544.8 54 veeqeaeIeeleeqiarkrevLkklker 81
                 +ee+ ++Ie le+++a++r    klk++
  MMETSP1325-20131115|10508_1 24 KEEMAEKIETLEKEVAELRGEVTKLKNE 51
                 5788899999999999999999999876 PP

>> PF07439.6  Protein of unknown function (DUF1515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.9   0.00049      0.17      34      68 ..      14      50 ..       3      61 .] 0.74

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00049
    PF07439.6 34 srakmyrkm..delvervtalegsvvklkaditsvke 68
                   a+m +++  +e+ e++++le  v++l++++t++k+
  MMETSP1325-20131115|10508_1 14 EMAEMAERVekEEMAEKIETLEKEVAELRGEVTKLKN 50
                 34556655422699*******************9996 PP

>> PF05377.6  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.2       0.6   2.1e+02      20      32 ..      12      24 ..       4      29 .. 0.76
   2 ?    9.7   2.6     0.002       0.7      12      35 ..      27      50 ..      12      53 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.6
    PF05377.6 20 rkeleelsksvek 32
                 ++e+ e+ + vek
  MMETSP1325-20131115|10508_1 12 ESEMAEMAERVEK 24
                 5788888888886 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.002
    PF05377.6 12 lstvvatvrkeleelsksvekike 35
                 ++ +++t++ke+ el+ +v k+k+
  MMETSP1325-20131115|10508_1 27 MAEKIETLEKEVAELRGEVTKLKN 50
                 445599************999986 PP

>> PF06102.7  Domain of unknown function (DUF947)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   4.9   0.00053      0.18      59     109 ..       9      58 ..       8      61 .] 0.93

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00053
    PF06102.7  59 dyrekEikelkkklkkkkadeeekeelkkklqslksrlktlkkkeeerevl 109
                  ++re+E++e+ + ++k++  +e++e l+k++ +l+ +  +lk++++ ++v 
  MMETSP1325-20131115|10508_1   9 EVRESEMAEMAERVEKEE-MAEKIETLEKEVAELRGEVTKLKNEKMAAAVQ 58 
                  89****************.9***********************99988876 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   9.2   0.00045      0.16      47     100 ..       3      54 ..       1      61 [] 0.84

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00045
   PF00769.14  47 eeaqklekkakeleeekerLeeeaaksekekeeLekevdeaeaevakleeerek 100
                  e+a++ e++++e++e+ er+e+e+++++   e Lekev+e+  ev kl++e+ +
  MMETSP1325-20131115|10508_1   3 EAAEAAEVRESEMAEMAERVEKEEMAEKI--ETLEKEVAELRGEVTKLKNEKMA 54 
                  78899999999999999999999999888..89999999999999999988765 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.4       1.1   3.7e+02      39      50 ..      12      23 ..       4      30 .. 0.56
   2 ?   10.6   3.7    0.0011      0.39      29      55 ..      25      51 ..      10      60 .. 0.68

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 1.1
                 HHHH.......H CS
   PF00170.16 39 eaeNkaLkkele 50
                 e+e+ ++++++e
  MMETSP1325-20131115|10508_1 12 ESEMAEMAERVE 23
                 444444444443 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHH.......HHHHHH CS
   PF00170.16 29 eeLeekvkeLeaeNkaLkkeleelkke 55
                 ee +ek+++Le+e  +L+ e+ +lk+e
  MMETSP1325-20131115|10508_1 25 EEMAEKIETLEKEVAELRGEVTKLKNE 51
                 556666666666666666666666654 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.8   0.00064      0.22       2      31 ..      23      52 ..       6      61 .] 0.66

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.00064
    PF06156.8  2 dkkelfdklseleeqleelleeleelkkel 31
                 +k+e+ +k+++le+++ el  e+++lk+e 
  MMETSP1325-20131115|10508_1 23 EKEEMAEKIETLEKEVAELRGEVTKLKNEK 52
                 456666666666666666666666666543 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1       5.7     2e+03      46      50 ..      17      21 ..       4      29 .. 0.44
   2 ?   11.7   3.0   0.00061      0.21      18      42 ..      29      53 ..      13      61 .] 0.80

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 5.7
                 HHHHH CS
    PF06005.7 46 eenkk 50
                 e  ++
  MMETSP1325-20131115|10508_1 17 EMAER 21
                 22222 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00061
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
    PF06005.7 18 dtialLqmeieeLkeeneqlkeene 42
                 ++i++L++e++eL+ e ++lk+e++
  MMETSP1325-20131115|10508_1 29 EKIETLEKEVAELRGEVTKLKNEKM 53
                 8999999999999999888887665 PP

>> PF08706.6  D5 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.8   0.00075      0.26      50     103 ..       6      57 ..       1      59 [. 0.83

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00075
    PF08706.6  50 eeaeeaksaakalkkfakssrskkkvknvlreakempldleideldadplllaf 103
                  e ae ++s+++++   +++++++ k++++ +e++e+  + e+++l  ++++ a+
  MMETSP1325-20131115|10508_1   6 EAAEVRESEMAEMAERVEKEEMAEKIETLEKEVAEL--RGEVTKLKNEKMAAAV 57 
                  4457899**************************877..8888888888877766 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   4.1    0.0008      0.28     116     154 ..      18      56 ..       3      61 .] 0.76

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.0008
    PF10211.4 116 leaeqgkselekeikkleeekeeLekevkelekkleeie 154
                  + +  +k+e+ ++i++le+e++eL+ ev++l+++  ++ 
  MMETSP1325-20131115|10508_1  18 MAERVEKEEMAEKIETLEKEVAELRGEVTKLKNEKMAAA 56 
                  455567888999999999999999999999888765544 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.1   0.00081      0.28      86     133 ..       5      52 ..       1      61 [] 0.69

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00081
   PF03962.10  86 kelqaeiekekkkreeteereelleelkeleeelkklkkeleklakld 133
                  +e+ +  e+e+++  e  e+ee+ e++++le+e+ +l+ e++kl++  
  MMETSP1325-20131115|10508_1   5 AEAAEVRESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKNEK 52 
                  444444555555556668889999999999999999999999776543 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   3.6    0.0011      0.38      12      53 ..       9      50 ..       7      60 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.0011
    PF08232.7 12 EwtrlErdrnaweiEraEmkarIakLeGerrglenlkedLkr 53
                 E +  E+   a  +E+ Em  +I  Le e+ +l+   ++Lk+
  MMETSP1325-20131115|10508_1  9 EVRESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKN 50
                 5667788889999*****************998887777775 PP

>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   4.3   0.00095      0.33      11      51 ..      13      55 ..       3      59 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00095
    PF10146.4 11 deleklknkiikev..ealeaeEkllkeykkeleeLlkEkmsH 51
                 +e+  +++++ ke+  e++e++Ek ++e ++e+++L++Ekm+ 
  MMETSP1325-20131115|10508_1 13 SEMAEMAERVEKEEmaEKIETLEKEVAELRGEVTKLKNEKMAA 55
                 678888999998863477899********************85 PP

>> PF10552.4  ORF6C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1       1.6   5.7e+02       7      26 ..       5      24 ..       2      27 .. 0.77
   2 ?   10.8   1.2   0.00079      0.28       6      38 ..      27      59 ..      23      61 .] 0.82

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 1.6
    PF10552.4  7 lealeelkekieeieekved 26
                 +ea+e  ++++ e+ e+ve+
  MMETSP1325-20131115|10508_1  5 AEAAEVRESEMAEMAERVEK 24
                 56777788888888888875 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00079
    PF10552.4  6 llealeelkekieeieekvedLkenlpLsagea 38
                 ++e++e+l++++ e+  +v++Lk++    a +a
  MMETSP1325-20131115|10508_1 27 MAEKIETLEKEVAELRGEVTKLKNEKMAAAVQA 59
                 678999999999999999999999887666665 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.9    0.0013      0.47      44      98 ..       4      57 ..       1      61 [] 0.82

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.0013
    PF13600.1 44 gegnatvlsvsvrrrdlqekdadaaseelaeleaelraledelarleaekealea 98
                 ++++a+v++ +++++  ++ + ++ +e+++ le+e+ +l+ e+ +l++ek a++ 
  MMETSP1325-20131115|10508_1  4 AAEAAEVRESEMAEMA-ERVEKEEMAEKIETLEKEVAELRGEVTKLKNEKMAAAV 57
                 4556888888888875.568899999***********************998765 PP

>> PF11853.3  Protein of unknown function (DUF3373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.1    0.0022      0.76      23      53 ..      20      51 ..       3      61 .] 0.60

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0022
    PF11853.3 23 aaadidklq.kiekLkkeleelkeqlkdlkkk 53
                    + +++  kie L+ke++el+ ++++lk++
  MMETSP1325-20131115|10508_1 20 ERVEKEEMAeKIETLEKEVAELRGEVTKLKNE 51
                 22223333348888888888888887766653 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.3    0.0023      0.81      63     109 ..       6      54 ..       1      61 [] 0.77

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0023
                  .XXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF04111.7  63 envealdseldeLkk..eeerlleeleelekeedkldeeleelqeekek 109
                  e  e  +se+ e++   e+e++ e++e leke  +l +e+++l++ek  
  MMETSP1325-20131115|10508_1   6 EAAEVRESEMAEMAErvEKEEMAEKIETLEKEVAELRGEVTKLKNEKMA 54 
                  4567778888888762256778899***************999999865 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   4.7    0.0054       1.9      56      93 ..      16      53 ..       3      61 .] 0.79

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0054
    PF08432.5 56 eaeeakkkkkelkeeiekvkkeyeekqkakkekkkkkk 93
                 ++ +++ +k+e++e+ie ++ke++e +  +++ k++k 
  MMETSP1325-20131115|10508_1 16 AEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKNEKM 53
                 5667788999***************9999999888873 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.4    0.0055       1.9     304     357 ..       4      58 ..       1      61 [] 0.63

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0055
    PF05667.6 304 aaeaaaevekaevkteedr..tkerekelealqeqidelessieeveeeikalksk 357
                  aaea aev ++e+++ ++r  ++e ++++e l+++++el+ ++ ++++e  a +++
  MMETSP1325-20131115|10508_1   4 AAEA-AEVRESEMAEMAERveKEEMAEKIETLEKEVAELRGEVTKLKNEKMAAAVQ 58 
                  4444.677777766655541144455778888888888888888888877666554 PP

>> PF05278.7  Arabidopsis phospholipase-like protein (PEARLI 4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   7.0     0.007       2.5     195     235 ..      10      50 ..       2      59 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.007
    PF05278.7 195 KevkerdvllkkqEmekqekelaekEKeikevrekvtemaa 235
                   +  e   ++++ E e++ +++   EKe++e+r +vt+++ 
  MMETSP1325-20131115|10508_1  10 VRESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKN 50 
                  2333334467888889999999999***********99875 PP

>> PF05266.9  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.2     0.007       2.5     110     157 ..       9      55 ..       1      61 [] 0.58

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.007
    PF05266.9 110 eerkklekeiaekeieqqeleseiaelerkilelrrkeallkekkeae 157
                  e r+    e+ae+ +e++e+ ++i  le+++ elr +  +lk+ k a+
  MMETSP1325-20131115|10508_1   9 EVRESEMAEMAER-VEKEEMAEKIETLEKEVAELRGEVTKLKNEKMAA 55 
                  3333333444454.7888888888888888888888655555444443 PP

>> PF11500.3  Spindle-body formation-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   5.0     0.012       4.3     100     143 ..       8      53 ..       2      61 .] 0.80

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.012
    PF11500.3 100 akkKdaealrlaeklkeee..akvaemeekvtelasqiaaevssad 143
                  a+ +++e+ ++ae+ ++ee  +k+++ e++v+el  ++++ ++++ 
  MMETSP1325-20131115|10508_1   8 AEVRESEMAEMAERVEKEEmaEKIETLEKEVAELRGEVTKLKNEKM 53 
                  67789999*******9999999999999999999999976666554 PP

>> PF05529.7  B-cell receptor-associated protein 31-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   4.6     0.012       4.2     142     182 ..      11      51 ..       1      61 [] 0.44

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.012
    PF05529.7 142 satkaakklkeekekklkeeveklkkeleekekdlealkkq 182
                   +++ a+ +++ ++++ +e++e l+ke++e + +++ lk+ 
  MMETSP1325-20131115|10508_1  11 RESEMAEMAERVEKEEMAEKIETLEKEVAELRGEVTKLKNE 51 
                  22222222244455555555555555555555555555542 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2024  (0.14804); expected 273.4 (0.02)
Passed bias filter:                     1345  (0.0983762); expected 273.4 (0.02)
Passed Vit filter:                       242  (0.0177004); expected 13.7 (0.001)
Passed Fwd filter:                        39  (0.00285255); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              39  [number of targets reported over threshold]
# CPU time: 0.49u 0.54s 00:00:01.03 Elapsed: 00:00:00.54
# Mc/sec: 270.70
//
Query:       MMETSP1325-20131115|10510_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-06   26.8   1.0    4.8e-06   26.2   0.7    1.3  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.7   3.5e-10   4.8e-06       4      25 ..      44      64 .]      42      64 .] 0.88

  Alignments for each domain:
  == domain 1    score: 26.2 bits;  conditional E-value: 3.5e-10
                 SEEE.E.E----EEEEETTT-- CS
   PF00397.21  4 gWeersddddGrvYYyNheTge 25
                 +W+e+++++ G++YY+N++T e
  MMETSP1325-20131115|10510_1 44 PWVEVHTPE-GQPYYHNTQTDE 64
                 5**999899.**********65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 284.01
//
Query:       MMETSP1325-20131115|10511_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-14   52.1   0.0    6.4e-14   51.9   0.0    1.0  1  PF00622.23 SPRY domain


Domain annotation for each model (and alignments):
>> PF00622.23  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0   4.7e-18   6.4e-14      40     102 ..       3      64 ..       1      68 [. 0.91

  Alignments for each domain:
  == domain 1    score: 51.9 bits;  conditional E-value: 4.7e-18
                  .----EEEECTTEEEE--SS-EEE--SS--SEE-EEE-S---..-EEEEECTCT.-EEEE-S--- CS
   PF00622.23  40 egswgldlskgskyhavtseetgeklqeegdviGvllDlegg..eisFtkngkhlgiyafrnvef 102
                   +sw++d+++++k+++ + e++g+ +++ gdv+G+llDle++   isFt ng++++  a + +e+
  MMETSP1325-20131115|10511_1   3 TNSWAYDGCRQQKWNGPEPEDYGLAWSA-GDVVGCLLDLEASpsRISFTLNGQPME-DAME-AEP 64 
                  48**************************.************999**********99.6766.555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 396.13
//
Query:       MMETSP1325-20131115|10512_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|10513_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.44s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|10516_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0089   16.0   0.2     0.0098   15.9   0.1    1.0  1  PF12507.3 Human Cytomegalovirus UL139 protein


Domain annotation for each model (and alignments):
>> PF12507.3  Human Cytomegalovirus UL139 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   7.1e-07    0.0098      75     119 ..       8      52 ..       4      53 .] 0.94

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 7.1e-07
    PF12507.3  75 eeaerkeeereryyeakrkemeeflpmgetfesearpqvgslrpp 119
                  e++e  ++e+e y e++ k  ++  p+++t ++ +r  +++l pp
  MMETSP1325-20131115|10516_1   8 ENLEPPNMEKEDYNEQQAKYFTAVKPWVQTTVAPSRLPDENLEPP 52 
                  7788899***********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 222.82
//
Query:       MMETSP1325-20131115|10517_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|10518_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.27   11.0   4.3       0.52   10.1   3.0    1.4  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.0   3.8e-05      0.52       9      24 ..     124     138 ..     123     139 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 3.8e-05
                  E.E----EEEEETTT- CS
   PF00397.21   9 sddddGrvYYyNheTg 24 
                  s+d+ G +YYyN+e g
  MMETSP1325-20131115|10518_1 124 STDN-GAYYYYNTEEG 138
                  6788.********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 790.80
//
Query:       MMETSP1325-20131115|10519_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 437.80
//
Query:       MMETSP1325-20131115|10520_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|10521_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.86    9.2   3.3        1.1    8.9   2.3    1.1  1  PF07543.7 Protein trafficking PGA2


Domain annotation for each model (and alignments):
>> PF07543.7  Protein trafficking PGA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.3     8e-05       1.1      59      97 ..      93     131 ..      81     138 .. 0.58

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 8e-05
    PF07543.7  59 ekakisanalrgaatage.levedtddEedeedvaeasav 97 
                   + k+ ++a   aa ag   e e+ ddEe+ ed  +++a 
  MMETSP1325-20131115|10521_1  93 SRVKLAPDASAAAAGAGAgAEEEEDDDEEE-EDERAPAAA 131
                  457888888888888877434444444433.344444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       536  (0.0392042); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.57
# Mc/sec: 574.30
//
Query:       MMETSP1325-20131115|10515_1  [L=676]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.12   12.4   0.0    2.7  3  PF00672.20 HAMP domain
        4.1    6.8  11.6        3.8    6.9   0.0    3.3  3  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF00672.20  HAMP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.8e-05      0.12       3      44 ..      24      65 ..      22      93 .. 0.87
   2 ?   -0.6   0.1      0.21   1.4e+03       7      20 ..     328     341 ..     323     360 .. 0.68
   3 ?   -6.1   2.5         2   1.4e+04       5      16 ..     577     588 ..     573     591 .. 0.43

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.8e-05
                 HHHHHHHHHHHHHHHHHXHTTHHHHHHHHHHHHHHH---TTS CS
   PF00672.20  3 vvlllalllalvlawllarrilrPlrrLaeaarriaeGdldd 44
                 +v++++l++++ + wl  rr ++++++ a+a +r +++++d+
  MMETSP1325-20131115|10515_1 24 IVAFVLLAVVTSMLWLAYRRCSKSIEKQARASERRRSREFDT 65
                 78999999*****************************99963 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.21
                  HHHHHHHHHHHHHX CS
   PF00672.20   7 lalllalvlawlla 20 
                  la++ +++la++l+
  MMETSP1325-20131115|10515_1 328 LAVVGLVILAFVLS 341
                  45555555555543 PP

  == domain 3    score: -6.1 bits;  conditional E-value: 2
                  HHHHHHHHHHHH CS
   PF00672.20   5 lllalllalvla 16 
                  + +++llal+++
  MMETSP1325-20131115|10515_1 577 VNVLVLLALFAG 588
                  333444444444 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0   0.00056       3.8      36      98 ..      20      91 ..      18     114 .. 0.73
   2 ?    3.0   3.2    0.0088        60      28      61 ..     316     349 ..     300     472 .. 0.81
   3 ?   -2.6   0.2      0.45   3.1e+03      43      58 ..     576     591 ..     569     621 .. 0.51

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00056
    PF04156.9 36 lisallgivliAlgvvLlalgllllllkapvqseedekiee.......srlqeelsesesqlsele..eele 98
                 l+ +++  vl+A++  +l l++  ++++ ++q + +e+ +         +  ++l++ +++l+el   + l+
  MMETSP1325-20131115|10515_1 20 LVNGIVAFVLLAVVTSMLWLAYRRCSKSIEKQARASERRRSrefdtmeAQRRAKLKKKTAHLTELNrrSSLS 91
                 678899999*************99999999999888877776666666555556666666666655333333 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.0088
    PF04156.9  28 lfasslgvlisallgivliAlgvvLlalglllll 61 
                  +++s lg+++++l++++l++l++vL a+ l+l+ 
  MMETSP1325-20131115|10515_1 316 FYISLLGMTLIPLAVVGLVILAFVLSAARLKLAK 349
                  7788888888888888888888888777776653 PP

  == domain 3    score: -2.6 bits;  conditional E-value: 0.45
    PF04156.9  43 ivliAlgvvLlalgll 58 
                  iv + + ++L+a+  +
  MMETSP1325-20131115|10515_1 576 IVNVLVLLALFAGMCI 591
                  2222223333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1014  (0.0741662); expected 273.4 (0.02)
Passed bias filter:                      505  (0.0369368); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.17u 0.35s 00:00:01.52 Elapsed: 00:00:00.56
# Mc/sec: 2892.75
//
Query:       MMETSP1325-20131115|10522_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-20   71.1   0.0    6.8e-20   70.9   0.0    1.0  1  PF04560.15 RNA polymerase Rpb2, domain 7
  ------ inclusion threshold ------
        0.1   12.2   0.4       0.11   12.1   0.2    1.1  1  PF10080.4  Predicted membrane protein (DUF2318)
          1    9.1   3.7        1.5    8.6   0.6    2.3  2  PF06093.8  Spt4/RpoE2 zinc finger


Domain annotation for each model (and alignments):
>> PF04560.15  RNA polymerase Rpb2, domain 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   0.0   1.5e-23   6.8e-20      15      82 ..       2      77 ..       1      78 [. 0.97

  Alignments for each domain:
  == domain 1    score: 70.9 bits;  conditional E-value: 1.5e-23
                 H---HHHHHHHHTTTTTEEEEEEES-HHHCCC........SHH-BTTSEEEEECEHHHHHHHHHHHCTT---EEES CS
   PF04560.15 15 ayGAaatLkErltikSDklevdvcgrckllaa........kivkgkeeiekveipesfklllkeLqslgldlklkl 82
                 +yGAaa++ Erl+++SD+++ +vc++ck+l +        ++++++e+++++++p+++kll++eLqs+++ +kl+l
  MMETSP1325-20131115|10522_1  2 GYGAAALISERLMTSSDAFTGHVCTKCKILGYlgehgmwcQNCRSSENMSEIKLPYACKLLFQELQSMNICPKLHL 77
                 8**********************************************************************99875 PP

>> PF10080.4  Predicted membrane protein (DUF2318)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   2.4e-05      0.11      36      70 ..      23      55 ..       8      71 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.4e-05
    PF10080.4 36 daCevCekkgYvqkgdklvCknCnvrialesigek 70
                   C+ C+  gY  + + + C+nC  + ++++i+  
  MMETSP1325-20131115|10522_1 23 HVCTKCKILGYLGE-HGMWCQNCRSSENMSEIK-L 55
                 47*********976.569*******99999998.4 PP

>> PF06093.8  Spt4/RpoE2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.6   0.00032       1.5      12      35 ..      16      39 ..       9      55 .. 0.56
   2 ?   -0.5   1.5      0.23     1e+03       6      22 ..      58      73 ..      41      80 .] 0.58

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00032
    PF06093.8 12 tedqFeeegCpnCellelkgdkek 35
                 + d F+ + C  C++l + g++ +
  MMETSP1325-20131115|10522_1 16 SSDAFTGHVCTKCKILGYLGEHGM 39
                 566666666666666655444332 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.23
    PF06093.8  6 lCklvktedqFeeegCp 22
                  Ckl+ +e q   ++Cp
  MMETSP1325-20131115|10522_1 58 ACKLLFQELQ-SMNICP 73
                 3555555555.455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       486  (0.0355471); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|10523_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-05   23.8   7.7    2.6e-05   23.8   5.4    2.1  2  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    6.5e-05   22.4  14.8    0.00021   20.8   9.8    2.3  1  PF13639.1  Ring finger domain
    0.00033   20.3  15.5     0.0027   17.4   0.0    3.3  3  PF01485.16 IBR domain
      0.003   17.0   6.3     0.0074   15.8   4.4    1.8  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.018   14.5   2.0      0.036   13.5   1.4    1.5  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
       0.12   11.9  10.4      0.053   13.0   5.4    1.9  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   5.4   1.1e-08   2.6e-05       2      43 ..      99     151 ..      98     156 .. 0.75
   2 ?   -2.8   2.8       2.3   5.2e+03      19      42 ..     158     194 ..     149     200 .. 0.59

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 1.1e-08
    PF13923.1   2 rfsCpiCleelen...pviltpCgHlyCkkCieqwleks.kkk........CPi 43 
                  + +C +C    e+     + + CgH++C +C+ q+l+ s k+k        CP 
  MMETSP1325-20131115|10523_1  99 EGVCGVCAMPCESeadS-YELSCGHSFCHECWAQYLNISvKEKgpqvlklpCPS 151
                  67899999988887744.78******************8733244455555886 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 2.3
    PF13923.1  19 tpCgH.l.yCkkCieqwleks.............kkkCP 42 
                   pC   + yC + + +++e++                CP
  MMETSP1325-20131115|10523_1 158 VPCEVfVkYCDESARKVYESHmvaafvdknpayaW--CP 194
                  57764246898888888888777666654433220..53 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   9.8   9.4e-08   0.00021       2      42 ..     101     151 ..     100     201 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 9.4e-08
    PF13639.1   2 eCaiCldelsegeevvrlpCgHvfHeeCldewlrssn..........sCPl 42 
                  +C +C ++++++ + ++l+CgH f+ eC +++l+ s            CP 
  MMETSP1325-20131115|10523_1 101 VCGVCAMPCESEADSYELSCGHSFCHECWAQYLNISVkekgpqvlklPCPS 151
                  7********99**********************876334456677777775 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   4.7     0.025        57      26      58 ..     105     132 ..      87     141 .. 0.74
   2 ?    4.5   0.3     0.012        28       9      33 ..     138     161 ..     130     168 .. 0.68
   3 !   17.4   0.0   1.2e-06    0.0027       3      35 ..     175     207 ..     172     210 .. 0.88

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.025
   PF01485.16  26 CeaiiekekgakkssvtCskCgfefCflCkkew 58 
                  C +++e+e +  +      +Cg++fC +C +++
  MMETSP1325-20131115|10523_1 105 CAMPCESEADSYE-----LSCGHSFCHECWAQY 132
                  5555555555555.....3499*******7765 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.012
   PF01485.16   9 kkylesekel.k.wCprpdCeaiieke 33 
                  k+   + +++ k  Cp+ +Ce+++ +e
  MMETSP1325-20131115|10523_1 138 KE---KGPQVlKlPCPSYKCEEVVPCE 161
                  33...333333589*******999765 PP

  == domain 3    score: 17.4 bits;  conditional E-value: 1.2e-06
   PF01485.16   3 yeklklkkylesekelkwCprpdCeaiiekekg 35 
                  ye  ++ +++++++ + wCp+p C++++   kg
  MMETSP1325-20131115|10523_1 175 YESHMVAAFVDKNPAYAWCPKPTCGKAVHYAKG 207
                  888899999*9****************988765 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   4.4   3.2e-06    0.0074       1      32 [.     102     135 ..     102     161 .. 0.76

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 3.2e-06
                  -TTTSSS-SSEE...BSCTS-EE-CHHHHHHHCS CS
   PF00097.20   1 CpiCleeakepn..elleCkHsfCskCirkilks 32 
                  C +C    + +     l C+HsfC++C  ++l+ 
  MMETSP1325-20131115|10523_1 102 CGVCAMPCESEAdsYELSCGHSFCHECWAQYLNI 135
                  666766666665556799*************996 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.4   1.6e-05     0.036      12      57 ..     101     150 ..      94     151 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.6e-05
                  B-TTT-S-SS....EEEES---EEEHHHHHHHHHHHHTTT-....-B--- CS
    PF13445.1  12 aCpiskeqsteqnpPvvLpCGhvisrealeklakggrsnkg....rfkCP 57 
                  +C ++   ++ + +++ L CGh ++ e+  ++++ + ++kg    ++ CP
  MMETSP1325-20131115|10523_1 101 VCGVCAMPCESEADSYELSCGHSFCHECWAQYLNISVKEKGpqvlKLPCP 150
                  79999997788999****************99995554444444566676 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   5.4   2.3e-05     0.053       5      41 ..     102     150 ..      98     159 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.3e-05
    PF13920.1   5 CvvCle...readvlllpCgHlclCeeCaerllk..........rkkkCp 41 
                  C vC     +ead   l CgH  +C+eC+ ++l+           k  Cp
  MMETSP1325-20131115|10523_1 102 CGVCAMpceSEADSYELSCGHS-FCHECWAQYLNisvkekgpqvLKLPCP 150
                  66665422289999********.*******99887766655555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.63
# Mc/sec: 802.59
//
Query:       MMETSP1325-20131115|10524_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 271.59
//
Query:       MMETSP1325-20131115|10526_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.62
# Mc/sec: 293.75
//
Query:       MMETSP1325-20131115|10527_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-16   58.5   0.0    4.4e-16   58.3   0.0    1.1  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.0   3.2e-20   4.4e-16       8      90 ..       1      84 [.       1      85 [. 0.97

  Alignments for each domain:
  == domain 1    score: 58.3 bits;  conditional E-value: 3.2e-20
                 -EEE-TT-B--EEEEEEE-EEEEEEE-----EE.EEEEE-TTEECSGGGCCSSSB-SSEEEEEEEEEEEEEEHHHHHHHHCC-H CS
   PF00027.24  8 evifkeGdpadslyiilsGkvkvykndedgkes.ilaelgpGdffGelalltgeprsatvvaltdvevlvipredfrelleknp 90
                 e++fkeGd ++ +y++ +G + ++k + + + +  + e+gpG+ffGe a+++++ r+a ++a t +e++v++ +d+  lle++p
  MMETSP1325-20131115|10527_1  1 EILFKEGDGGTAMYFVNRGAITIFKMNLSTNAHfNITEIGPGGFFGEVAIVHKTVRAAGAKAATFCELYVLENNDLTHLLEHYP 84
                 78***********************999999888************************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 557.41
//
Query:       MMETSP1325-20131115|10525_1  [L=413]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       890  (0.0650965); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.36s 00:00:01.12 Elapsed: 00:00:00.64
# Mc/sec: 1546.40
//
Query:       MMETSP1325-20131115|10530_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|10528_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-13   48.1   0.0    8.1e-13   47.6   0.0    1.3  1  PF00225.18 Kinesin motor domain
     0.0015   17.7   0.0      0.002   17.3   0.0    1.1  1  PF00483.18 Nucleotidyl transferase


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.0   1.2e-16   8.1e-13     275     333 ..       9      68 ..       1      70 [. 0.86

  Alignments for each domain:
  == domain 1    score: 47.6 bits;  conditional E-value: 1.2e-16
                  HHHHT..TTSS-CGGGSHHHHHTGGCH----EEEEEEEE--BGGGHHHHHHHHHHHHHHC CS
   PF00225.18 275 aLaen.kkskhvpYRdSkLTrlLqdsLggnsktlmivtvspsssnleetlstLrfaerak 333
                  + +++ kk+  vp+ dS LT+lL+++Lgg s+t+++v+ s + +++eet+ tLrf+e ++
  MMETSP1325-20131115|10528_1   9 QANQKrKKQLRVPFYDSMLTQLLEPALGGPSRTVILVCASQEPEHAEETVGTLRFGEAVR 68 
                  44444578899*********************************************9987 PP

>> PF00483.18  Nucleotidyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0     3e-07     0.002      19     118 ..      12     112 ..       7     127 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 3e-07
                  TTS-GGG---CTT-HHHHHHHHHH.TT-SEEEEEEEGGGHHHHHHHTTTT-SS-.B---EEESS--..-HHHHHHHHHHTS-TTS...EEEEEESS-B---.H CS
   PF00483.18  19 tlakklvpvlgkerliqytlsrlansgieeiivvltqehrflvaeqlregsklgvevlialepegr..gtAdAvalaaelledeksdelvlvLagDhlikd.a 118
                  ++ kk++ v   ++++ + l+  +    +++i+v+ +++ + ++e ++    +g e   ++e++g+  +   Av+ a+  ++++ ++ ++++    h+++  +
  MMETSP1325-20131115|10528_1  12 QKRKKQLRVPFYDSMLTQLLEPALGGPSRTVILVCASQEPEHAEETVGTLR-FG-EAVRLVERSGEkdNVSGAVKAAVAAIDEQVREIELVIKEKEHWVTRtT 112
                  56788888877778**********************************995.99.7888888888889**************999876777777778777643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       583  (0.0426419); expected 273.4 (0.02)
Passed bias filter:                      429  (0.031378); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 1034.79
//
Query:       MMETSP1325-20131115|10529_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-17   63.0   0.0    3.1e-17   62.4   0.0    1.2  1  PF13679.1  Methyltransferase domain
    3.4e-09   36.3   0.0    5.3e-09   35.7   0.0    1.2  1  PF13847.1  Methyltransferase domain
    3.2e-08   33.8   0.0    6.4e-08   32.8   0.0    1.6  1  PF08242.7  Methyltransferase domain
    9.3e-08   32.2   0.1    1.8e-07   31.3   0.1    1.5  1  PF13649.1  Methyltransferase domain
    3.2e-07   29.5   0.0    7.5e-07   28.3   0.0    1.6  2  PF01209.13 ubiE/COQ5 methyltransferase family
    8.1e-06   26.2   0.1    1.6e-05   25.3   0.1    1.6  1  PF12847.2  Methyltransferase domain
    2.3e-05   23.7   0.1    4.6e-05   22.7   0.0    1.5  2  PF05175.9  Methyltransferase small domain
     0.0002   21.6   0.1     0.0004   20.6   0.0    1.5  1  PF08241.7  Methyltransferase domain
    0.00037   19.6   0.0    0.00056   19.0   0.0    1.2  1  PF00891.13 O-methyltransferase
     0.0019   17.7   0.0     0.0029   17.1   0.0    1.4  1  PF13489.1  Methyltransferase domain
     0.0065   16.3   1.5      0.013   15.4   1.0    1.7  1  PF13659.1  Methyltransferase domain
  ------ inclusion threshold ------
       0.03   13.7   0.0      0.053   12.9   0.0    1.3  1  PF01135.14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)


Domain annotation for each model (and alignments):
>> PF13679.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.4   0.0   2.7e-20   3.1e-17       2     134 ..      56     181 ..      55     186 .. 0.86

  Alignments for each domain:
  == domain 1    score: 62.4 bits;  conditional E-value: 2.7e-20
    PF13679.1   2 Klkeveklaelveklvkea.akeegsltvvDvGaGkgYLafvlasylkekeyklkvvgidvkeelvekaeelaeklgkkfnkslsfaegtiaeatpkesvdvviaLHaCdtltdealrlalekeakllvlvpCC 134
                  K+ + + ++  ++++++       ++l++vDvG Gkg La+++++   e   ++ v+ +d+++e+ ++ +++ ++ +  +  +l+f+ g+ + + + e  dvv+aLHaC+ l+d a+ +a++++a+++v  pCC
  MMETSP1325-20131115|10529_1  56 KRPQLDFMIGQISEVLRAHpDWGARPLQIVDVGGGKGNLAQAISA---EFGIQVAVTVLDIQKEALARGRARTRRRN--M-PNLNFVLGDAS-TAHFEGLDVVVALHACGGLSDVAIGHAVAHQAAFVV-TPCC 181
                  666677777777777777644567899******************...77899****************99999999..7.99******965.55899**************************98876.6999 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   4.6e-12   5.3e-09       5      83 ..      82     157 ..      79     182 .. 0.86

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 4.6e-12
    PF13847.1   5 ikvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfenveFiqgdieeleklleesfDlvisnevl 83 
                  ++++D+G G+G l+++++ e g +  v+ +Di++ea+++ + r+++    n++F  gd+  +   +e   D+v++  ++
  MMETSP1325-20131115|10529_1  82 LQIVDVGGGKGNLAQAISAEFGIQVAVTVLDIQKEALARGRARTRRRNMPNLNFVLGDASTAH--FE-GLDVVVALHAC 157
                  79********************9**************************************99..85.89**9996666 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   5.7e-11   6.4e-08       1      81 [.      85     162 ..      85     179 .. 0.81

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 5.7e-11
    PF08242.7   1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkd 81 
                  +++G+G G+l++a+ +++ +++ +t +Di+++a+++ ++++++   +n  n+n+   d+++ +  +  Dvvva++++  l d
  MMETSP1325-20131115|10529_1  85 VDVGGGKGNLAQAISAEFgIQVAVTVLDIQKEALARGRARTRR---RNMPNLNFVLGDASTAHF-EGLDVVVALHACGGLSD 162
                  69********************************444444444...467888888888766665.5*******998877655 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.1   1.6e-10   1.8e-07       1      74 [.      84     154 ..      84     178 .. 0.85

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 1.6e-10
    PF13649.1   1 ildlGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskgl.kvkfvqadaralpfeegefdlvvca 74 
                  i+d+G G G+ ++a+  ++  g++ +v+ +Di++eal+ ++ r+++++  + +fv +da   +fe+   d+vv  
  MMETSP1325-20131115|10529_1  84 IVDVGGGKGNLAQAISAEF--GIQVAVTVLDIQKEALARGRARTRRRNMpNLNFVLGDASTAHFEG--LDVVVAL 154
                  79****************9..999*****************999996656***********99998..7777773 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   6.6e-10   7.5e-07      46     113 ..      79     146 ..      70     181 .. 0.90
   2 ?   -1.6   0.0      0.95   1.1e+03      51      81 ..     153     183 ..     146     204 .. 0.74

  Alignments for each domain:
  == domain 1    score: 28.3 bits;  conditional E-value: 6.6e-10
   PF01209.13  46 krgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfe 113
                   r+ +++Dv gG g+la ++s + g +  v+vlDi+++ L  g+++ +++ + n++f+ ++a    fe
  MMETSP1325-20131115|10529_1  79 ARPLQIVDVGGGKGNLAQAISAEFGIQVAVTVLDIQKEALARGRARTRRRNMPNLNFVLGDASTAHFE 146
                  57889*********************************************************998887 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.95
   PF01209.13  51 vlDvagGtgDlafklsdsvgekgkvvvlDin 81 
                  +l  +gG +D+a+  + + ++ + v+ + + 
  MMETSP1325-20131115|10529_1 153 ALHACGGLSDVAIGHAVAHQAAFVVTPCCFC 183
                  57789999**999988888887777766654 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.1   1.4e-08   1.6e-05       4      78 ..      83     155 ..      80     198 .. 0.77

  Alignments for each domain:
  == domain 1    score: 25.3 bits;  conditional E-value: 1.4e-08
    PF12847.2   4 rilDlGcGtGslslelarlrpgak..vvgvDpseeslelarenaksldleeriellqgdakeelsllerfDavllkg 78 
                   i+D+G G G+l+ +++  + g +  v+ +D+++e+l++ r+++ ++++ +++ ++ gda    +  e  D+v++ +
  MMETSP1325-20131115|10529_1  83 QIVDVGGGKGNLAQAISA-EFGIQvaVTVLDIQKEALARGRART-RRRNMPNLNFVLGDA--STAHFEGLDVVVALH 155
                  69**********999999.5777777999***************.88999**********..444444466666655 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.7   4.2e+03      20      43 ..      17      40 ..      10      45 .. 0.75
   2 !   22.7   0.0   4.1e-08   4.6e-05      34     103 ..      83     152 ..      67     175 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 3.7
                 -HHHHHHS-TT------B------ CS
    PF05175.9 20 selLletlpkklagkvlDlGcGaG 43
                 +++L + +p++   +v++l+c  G
  MMETSP1325-20131115|10529_1 17 TAVLRDEFPAEAVVDVAELACDGG 40
                 778888888888788888888655 PP

  == domain 2    score: 22.7 bits;  conditional E-value: 4.1e-08
                  ---B-------HHHHHHHH.-TT----EEESBHHHHHHHHHHHHH----.--EEE-STTTT--.--BS-EE CS
    PF05175.9  34 kvlDlGcGaGvlgaalake.spelevtlvDinarAvesakanleanklenvevlasdlleeveekkfdliv 103
                  +++D+G G G l+ a+++e + +++vt++Di+++A++  +a  ++ ++ n++++  d+  +   + +d++v
  MMETSP1325-20131115|10529_1  83 QIVDVGGGKGNLAQAISAEfGIQVAVTVLDIQKEALARGRARTRRRNMPNLNFVLGDASTAHF-EGLDVVV 152
                  59***********887655166788********************************999888.8888887 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   3.5e-07    0.0004       1      70 [.      85     157 ..      85     173 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 3.5e-07
    PF08241.7   1 LdvGcGtglllealaer..paarvtgvDlseemlatakerlkeegle...lvvadaeelpfednsfDvvvssevl 70 
                  +dvG G+g+l++a++ +   +  vt +D+++e+la+ ++r +++++    +v +da + +fe    Dvvv+ +++
  MMETSP1325-20131115|10529_1  85 VDVGGGKGNLAQAISAEfgIQVAVTVLDIQKEALARGRARTRRRNMPnlnFVLGDASTAHFE--GLDVVVALHAC 157
                  59***************999999************999999999877999***********6..99999999986 PP

>> PF00891.13  O-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   4.9e-07   0.00056     103     134 ..      83     115 ..      68     144 .. 0.75

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 4.9e-07
                  EEEE--------HHHHHHHST.T-EEEEE---- CS
   PF00891.13 103 slvDVGGGtGalaaaivsayP.hikgivfDlPh 134
                  ++vDVGGG+G+la+ai++++  ++ ++v+D+ +
  MMETSP1325-20131115|10529_1  83 QIVDVGGGKGNLAQAISAEFGiQVAVTVLDIQK 115
                  79****************996468889999754 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   2.6e-06    0.0029       9      68 ..      67     135 ..      57     195 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 2.6e-06
    PF13489.1   9 ladllerllarlkpggrvLDiGcGtGillell.aengf..dvtgvDpspaaigk......akqaqksqf 68 
                  +++ l ++ ++ +++ +++D+G G+G+l++ + ae+g    vt  D+ ++a  +      ++++++ +f
  MMETSP1325-20131115|10529_1  67 ISEVLRAHPDWGARPLQIVDVGGGKGNLAQAIsAEFGIqvAVTVLDIQKEALARgrartrRRNMPNLNF 135
                  667778888999999*****************9999994467799998888887888888666666666 PP

>> PF13659.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   1.0   1.1e-05     0.013       2      82 ..      82     184 ..      81     252 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.1e-05
    PF13659.1   2 drvldpgcGsGtfllaalell..aalllgvEldpraaalaarnlaraglaervrvrqgdlrdl.......................aellragsfdlvvtnpPygp 82 
                  ++++d+g G G+++ a  ++   +  +++++++++a+a  +++ +r +  ++++++ gd+ ++                       +  + a ++ +vvt   ++ 
  MMETSP1325-20131115|10529_1  82 LQIVDVGGGKGNLAQAISAEFgiQVAVTVLDIQKEALARGRARTRRRNM-PNLNFVLGDASTAhfegldvvvalhacgglsdvaigH--AVAHQAAFVVTPCCFCA 184
                  5799**********999877559*************9999999999988.5899999999777566666666666666666666542..34566666666666664 PP

>> PF01135.14  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.6e-05     0.053      76     134 ..      83     141 ..      62     147 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.6e-05
                  EEEEE------HHHHHHTTSSEEE...EE-SB---HHHHHHHHHHTT--SEEEE----- CS
   PF01135.14  76 rvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldlenvivvvgDGr 134
                  ++++vG+G G l+  ++  +g +  v  ++ +ke  ++ +++ ++ ++ n+ +v gD  
  MMETSP1325-20131115|10529_1  83 QIVDVGGGKGNLAQAISAEFGIQVAVTVLDIQKEALARGRARTRRRNMPNLNFVLGDAS 141
                  689*********************99999****************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1359.57
//
Query:       MMETSP1325-20131115|10531_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.77    8.8  17.4       0.81    8.7  12.0    1.0  1  PF05432.6  Bone sialoprotein II (BSP-II)
        3.3    5.3   6.1        3.5    5.2   4.3    1.1  1  PF05642.6  Sporozoite P67 surface antigen
        5.3    5.1  13.9        5.9    5.0   9.6    1.0  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
        7.8    5.4   6.9        8.4    5.3   4.8    1.0  1  PF13203.1  Putative metallopeptidase domain


Domain annotation for each model (and alignments):
>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  12.0   0.00024      0.81     129     191 ..      25      85 ..       8      90 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00024
    PF05432.6 129 aakedesdedeeeeeeeeeeeeaeveeneqsvnGtstnstevdsGngssggdngeegeeesvt 191
                  a  ++  d + e++eeeee+ee+ v ++e +  G +  +   ++G+g+ +gd+++ g e++++
  MMETSP1325-20131115|10531_1  25 AHVDEGRDSEAEDQEEEEEQEEEKVGKEEAA--GKAGSARGRPGGHGAEAGDEDDSGSEDEID 85 
                  3334444556566666788888888888765..5555566789***********999998875 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   4.3     0.001       3.5      95     146 ..      17      67 ..       4      89 .. 0.62

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.001
    PF05642.6  95 qeselqsdteineddkGskedseedddeeeeednkstsskdgkgskkaqpgv 146
                  +++ ++++++++e+ + + ed+ee++++eee+  k   + ++ gs +++pg 
  MMETSP1325-20131115|10531_1  17 THMGFHDEAHVDEGRDSEAEDQEEEEEQEEEKVGKE-EAAGKAGSARGRPGG 67 
                  556677777777777777777777666555444443.344556777888873 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   9.6    0.0017       5.9     306     367 ..      23      83 ..       9      90 .. 0.42

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0017
                  XXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXX CS
    PF05793.7 306 eEeeekk.eieqdedeeekeeekkeeegklskkkkkakklkkkkkekdkkdSddeedsddsDi 367
                  +E +  +  + ++ed+ee+ee+++e+ gk++    ka   +++ +++   +  de+ds ++D 
  MMETSP1325-20131115|10531_1  23 DEAHVDEgRDSEAEDQEEEEEQEEEKVGKEE-AAGKAGSARGRPGGH-GAEAGDEDDSGSEDE 83 
                  3333222022223333333333333333333.333444456666666.444444444444442 PP

>> PF13203.1  Putative metallopeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   4.8    0.0024       8.4     142     209 ..      16      86 ..       2      90 .. 0.56

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0024
    PF13203.1 142 k.....kkrsdkqsdsstdggdgsgesegqgeqdskknrkdapekakvralakgesadlaespegksapeaea 209
                  +     + +++ +++++ ++ d+++e+e++ e+ +k++   ++ +a  r++  g  a++ +++++ s++e +a
  MMETSP1325-20131115|10531_1  16 DthmgfHDEAHVDEGRDSEAEDQEEEEEQEEEKVGKEEAAGKAGSA--RGRPGGHGAEAGDEDDSGSEDEIDA 86 
                  3455555556666666666666666666666666666665554444..4555555555666656666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       761  (0.0556612); expected 273.4 (0.02)
Passed bias filter:                      513  (0.0375219); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.45s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 403.83
//
Query:       MMETSP1325-20131115|10534_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 257.06
//
Query:       MMETSP1325-20131115|10535_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.072   12.6   3.0      0.078   12.5   2.1    1.1  1  PF04534.7 Herpesvirus UL56 protein


Domain annotation for each model (and alignments):
>> PF04534.7  Herpesvirus UL56 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.1   5.7e-06     0.078      75     127 ..       1      51 [.       1      63 [. 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.7e-06
    PF04534.7  75 rgrsrraaqraarrarrraerrarrrsfgagglfvstPlflPetrlaappdvr 127
                  r r+ +a  r    a  +++ ra+ r  g+++l +s  l  P   + a +  +
  MMETSP1325-20131115|10535_1   1 RKRATKALTRNPIAAFSPPPTRAKARYIGTHALTLSHALISPF--IRARKRAT 51 
                  6688899999999999************************997..55555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|10536_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.63
# Mc/sec: 429.82
//
Query:       MMETSP1325-20131115|10537_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-27   94.6   1.7    7.9e-27   94.4   1.2    1.1  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
       0.11   10.9   0.1       0.14   10.5   0.0    1.1  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.4   1.2   1.2e-30   7.9e-27      75     195 ..       3     137 .]       1     137 [] 0.77

  Alignments for each domain:
  == domain 1    score: 94.4 bits;  conditional E-value: 1.2e-30
                  HHHHHHC---BBTTTS---SSC-.....S--CC.CC--C..........CCCECEEEEEESS.........-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-T..TG--EEEEE---BSCTTC-EEEEE-SB-TT-- CS
   PF00112.18  75 feyikknggivtekdypYkakeg....gkCkkk.kkkek.........evakikgygkvken.........seealkkalakngPvsvaidaseedfqlYksGvyketecss..telnhavlivGygvengkkyWivkNSWgtdwG 195
                  ++y+  ngg++t+++ypY+  ++    ++C+++ +++ +         e+a++                  +e++lk++l ++gP+s+a dase+  ++Y+sGv+++++css   +l+ha+++vGy+++ +++yWiv+NSWg++wG
  MMETSP1325-20131115|10537_1   3 MDYMSPNGGLTTQSNYPYNTATSyghaTSCDTTlEAE-TvsgttpssyEWATT--------PctsvtcnnqDESTLKSNLLAYGPISIACDASEW--SSYTSGVLTSSSCSSsaLKLDHAIQLVGYNTDASTPYWIVRNSWGDSWG 137
                  579999*************665556665666663322.223333332222222........12222333458**********************5..9**********999977899****************************9 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0     2e-05      0.14     358     390 ..     107     137 .]      97     137 .] 0.83

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 2e-05
   PF03051.10 358 lmtHamvltgvdvdddgkvtkwkvEnsWGedsG 390
                   ++Ha+ l+g +   d ++  w v nsWG+  G
  MMETSP1325-20131115|10537_1 107 KLDHAIQLVGYNT--DASTPYWIVRNSWGDSWG 137
                  579********99..556678********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 547.17
//
Query:       MMETSP1325-20131115|10538_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 514.22
//
Query:       MMETSP1325-20131115|10540_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      390  (0.0285255); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 774.21
//
Query:       MMETSP1325-20131115|10542_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   1.0        0.2   11.1   0.7    1.3  1  PF04120.7 Low affinity iron permease


Domain annotation for each model (and alignments):
>> PF04120.7  Low affinity iron permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.7   1.4e-05       0.2      18      60 ..      45      87 ..      40      90 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.4e-05
    PF04120.7 18 fvlavllvvvwaasgpvfkysdtwQLviNtgttiitFLmvfLi 60
                 + +a + v++   ++p f+y  +w Lv+   +  ++F m f +
  MMETSP1325-20131115|10542_1 45 VFFAPIHVLMTFHGAPPFEYRIAWTLVMACIPLTVAFVMAFCL 87
                 5567788999999**************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       728  (0.0532475); expected 273.4 (0.02)
Passed bias filter:                      389  (0.0284523); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 526.16
//
Query:       MMETSP1325-20131115|10539_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.61
# Mc/sec: 491.06
//
Query:       MMETSP1325-20131115|10544_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-11   43.2   0.0    2.6e-11   43.1   0.0    1.1  1  PF00271.26 Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.0   1.9e-15   2.6e-11       2      62 ..      15      78 ..      14      79 .] 0.95

  Alignments for each domain:
  == domain 1    score: 43.1 bits;  conditional E-value: 1.9e-15
                 HHHH----EEEE-TTS-HHHHHHHHHHHHTTTS...SEEEESTTC-S---STTESEEEESSSBS CS
   PF00271.26  2 llekkgikvailhgelpqnereeileqfnagks...kvlvatnvaerGidlpdvnvVinfdlpr 62
                 ll+  ++++++++g+++ +er++ +++fn+  s    +l++t++++ Gi+l  ++ Vi fd ++
  MMETSP1325-20131115|10544_1 15 LLKGADYQYCRIDGSTKGEERDAAMDRFNEPGSpyfAFLLSTRAGGLGINLATADIVILFDSDW 78
                 678889************************999999*************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 371.20
//
Query:       MMETSP1325-20131115|10545_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.1    7.5  11.0        2.4    7.3   7.6    1.1  1  PF04391.7 Protein of unknown function (DUF533)


Domain annotation for each model (and alignments):
>> PF04391.7  Protein of unknown function (DUF533)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   7.6   0.00018       2.4      16      65 ..      14      71 ..       1      83 [. 0.52

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00018
    PF04391.7 16 llglllggkkarklggkalklGglAalgglAykayqdwqakqaa.........aaagep 65
                 + g++ g  ++ ++gg+++   g+ + gg+++ + q++q  +a          +++++p
  MMETSP1325-20131115|10545_1 14 MGGQMGGPMGG-QMGGGMAMGMGMGMGGGMGMSQQQQQQPMNAMnmmpppqqqQQQQQP 71
                 33333333333.67777777777889999999999988655544555432211111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       662  (0.0484201); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.64
# Mc/sec: 318.27
//
Query:       MMETSP1325-20131115|10547_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.73
# Mc/sec: 295.44
//
Query:       MMETSP1325-20131115|10548_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|10546_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-15   55.0   0.0    8.4e-15   54.5   0.0    1.2  1  PF13679.1  Methyltransferase domain
    1.8e-07   30.7   0.0    2.8e-07   30.1   0.0    1.2  1  PF13847.1  Methyltransferase domain
    2.7e-07   29.9   0.0    4.2e-07   29.2   0.0    1.2  1  PF00891.13 O-methyltransferase
    4.6e-07   30.2   0.2    8.2e-07   29.4   0.1    1.4  1  PF12847.2  Methyltransferase domain
    5.7e-06   25.4   0.0      1e-05   24.6   0.0    1.3  1  PF01209.13 ubiE/COQ5 methyltransferase family
    2.4e-05   23.6   0.0    3.8e-05   23.0   0.0    1.2  1  PF05175.9  Methyltransferase small domain
    7.2e-05   22.9   0.1    0.00016   21.8   0.1    1.6  1  PF13649.1  Methyltransferase domain
    0.00031   21.0   0.1    0.00066   19.9   0.0    1.6  1  PF08242.7  Methyltransferase domain
     0.0079   16.5   0.0      0.014   15.7   0.0    1.4  1  PF08241.7  Methyltransferase domain
     0.0089   15.6   0.0      0.013   15.1   0.0    1.4  1  PF13489.1  Methyltransferase domain
  ------ inclusion threshold ------
      0.011   14.6   0.0      0.016   14.1   0.0    1.1  1  PF02390.12 Putative methyltransferase
      0.068   12.5   0.0       0.11   11.9   0.0    1.2  1  PF01135.14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)


Domain annotation for each model (and alignments):
>> PF13679.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   7.3e-18   8.4e-15       8     136 ..      41     223 ..      34     227 .. 0.91

  Alignments for each domain:
  == domain 1    score: 54.5 bits;  conditional E-value: 7.3e-18
    PF13679.1   8 klaelveklvkeaakeegsltvvDvGaGkgYLafvlasylkeke.yklkvvgidvkeelvekaeelaeklgkkfnkslsfaegtiaeatp................................................................kesvdvviaLHaCdtltdealrlale.keakllvlvpCCyh 136
                   +++ +e +    +++++  +v+DvG G+g La+++a+     +  +++v+ id+++    +  ++a+++g  + +++ f+ g+ a a++                                                                + ++d+++aLHaC+ l+d al +a +  +    +++pCCy 
  MMETSP1325-20131115|10546_1  41 WFLARLEIM----RSKTAFRSVLDVGGGRGDLARAIAA-----RfGDTQVTVIDTNRTSLIAGATRAKEVG--L-TNMTFVCGDFAAAKEilsgqgivgadddgvvdlgrstgtdppcsggadgaastsvsegvdmddggsgnngpraaggrpsPPPIDMIVALHACGGLSDAALSFACSiDRPLPFLIAPCCYV 223
                  555544442....34678889*****************.....446899**********************..7.99*********9999******************************************************************************************7777778899***95 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   2.5e-10   2.8e-07       6      67 ..      57     117 ..      53     123 .. 0.91

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 2.5e-10
    PF13847.1   6 kvlDlGCGtGylllelaeelgpgakvvGiDiseeaielAkeraqklgfenveFiqgdieele 67 
                  +vlD+G G G+l++++a +   + +v+ iD + +++    +ra++ g++n++F  gd+ +++
  MMETSP1325-20131115|10546_1  57 SVLDVGGGRGDLARAIAARF-GDTQVTVIDTNRTSLIAGATRAKEVGLTNMTFVCGDFAAAK 117
                  69***************664.5799********************************98855 PP

>> PF00891.13  O-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   3.7e-10   4.2e-07      99     153 ..      53     114 ..      38     117 .. 0.84

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 3.7e-10
                  TT-SEEEE--------HHHHHHHSTT-EEEEE----..-HHHHHH.....TTTEEEE---TT CS
   PF00891.13  99 eglsslvDVGGGtGalaaaivsayPhikgivfDlPh..vvadake.....adrvefvgGDmf 153
                  + ++s++DVGGG+G la+ai++++  ++++v+D  +   +a+a++      ++++fv GD+ 
  MMETSP1325-20131115|10546_1  53 TAFRSVLDVGGGRGDLARAIAARFGDTQVTVIDTNRtsLIAGATRakevgLTNMTFVCGDFA 114
                  6799*****************************865116777777888998899******95 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.1   7.2e-10   8.2e-07       4      70 ..      57     122 ..      54     151 .. 0.84

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 7.2e-10
    PF12847.2   4 rilDlGcGtGslslelarlrpgakvvgvDpseeslelarenaksldleeriellqgdakeelsller 70 
                  ++lD+G G G+l+ ++a ++++ +v+ +D ++ sl     +ak+++l +++++++gd+  ++++l  
  MMETSP1325-20131115|10546_1  57 SVLDVGGGRGDLARAIAARFGDTQVTVIDTNRTSLIAGATRAKEVGL-TNMTFVCGDFAAAKEILSG 122
                  79****************************************77666.**********666555555 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0     9e-09     1e-05      45     106 ..      51     112 ..      40     123 .. 0.85

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 9e-09
   PF01209.13  45 vkrg.akvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqan 106
                  +k++ ++vlDv gG gDla +++   g++ +v+v+D n + L  g  ++ke g +n+ f++++
  MMETSP1325-20131115|10546_1  51 SKTAfRSVLDVGGGRGDLARAIAARFGDT-QVTVIDTNRTSLIAGATRAKEVGLTNMTFVCGD 112
                  34331589***************999976.89*****************************97 PP

>> PF05175.9  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   3.4e-08   3.8e-05      25      93 ..      47     116 ..      42     125 .. 0.89

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 3.4e-08
                  HHS-TT.------B-------HHHHHHHH-TT----EEESBHHHHHHHHHHHHH----.--EEE-STTTT CS
    PF05175.9  25 etlpkk.lagkvlDlGcGaGvlgaalakespelevtlvDinarAvesakanleanklenvevlasdllee 93 
                  e++ +k   ++vlD+G G G l+ a+a++  +++vt++D n+ ++ +  + +++ +l+n++++  d  ++
  MMETSP1325-20131115|10546_1  47 EIMRSKtAFRSVLDVGGGRGDLARAIAARFGDTQVTVIDTNRTSLIAGATRAKEVGLTNMTFVCGDFAAA 116
                  56666657789**********************************************9999999998776 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   1.4e-07   0.00016       1      61 [.      58     116 ..      58     131 .. 0.92

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 1.4e-07
    PF13649.1   1 ildlGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskgl.kvkfvqadaral 61 
                  +ld+G G G+ +ra++ ++  g + +v+ +D +   l ++++r+++ gl +++fv++d+ a 
  MMETSP1325-20131115|10546_1  58 VLDVGGGRGDLARAIAARF--G-DTQVTVIDTNRTSLIAGATRAKEVGLtNMTFVCGDFAAA 116
                  79*****************..7.69*******************999999********9775 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   5.8e-07   0.00066       1      51 [.      59     109 ..      59     129 .. 0.87

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 5.8e-07
    PF08242.7   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnv 51 
                  L++G+G G+l+ra+++++ d ++t +D ++ ++ + + + ++ +  n ++v
  MMETSP1325-20131115|10546_1  59 LDVGGGRGDLARAIAARFGDTQVTVIDTNRTSLIAGATRAKEVGLTNMTFV 109
                  8*****************************999788888777776666554 PP

>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.2e-05     0.014       1      52 [.      59     114 ..      59     119 .. 0.93

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 1.2e-05
    PF08241.7   1 LdvGcGtglllealaer.paarvtgvDlseemlatakerlkeegle...lvvadae 52 
                  LdvG G+g l++a+a r  + +vt +D++ ++l    +r+ke gl+   +v++d+ 
  MMETSP1325-20131115|10546_1  59 LDVGGGRGDLARAIAARfGDTQVTVIDTNRTSLIAGATRAKEVGLTnmtFVCGDFA 114
                  8******************************9999999999999999999999964 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.1e-05     0.013      21      55 ..      53      89 ..      36     201 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.1e-05
    PF13489.1 21 kpggrvLDiGcGtGillellaen.gf.dvtgvDpspa 55
                  +  +vLD+G G G+l++ +a++ g  +vt +D ++ 
  MMETSP1325-20131115|10546_1 53 TAFRSVLDVGGGRGDLARAIAARfGDtQVTVIDTNRT 89
                 45679***************66535459*****9765 PP

>> PF02390.12  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.4e-05     0.016      22      77 ..      57     112 ..      32     121 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.4e-05
                  EEEE--------HHHHHHH-TTSEEE---S-HHHHHHHHHHHHHH--TTB------ CS
   PF02390.12  22 lvleIGfGsGdflvalAkknPdklflGiEirqkvvekvlkkiealglkNlrilegd 77 
                   vl++G G+Gd+  a+A+++ d+++  i+ +++++ +   ++++ gl+N+  ++gd
  MMETSP1325-20131115|10546_1  57 SVLDVGGGRGDLARAIAARFGDTQVTVIDTNRTSLIAGATRAKEVGLTNMTFVCGD 112
                  79*********************************9******************98 PP

>> PF01135.14  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.5e-05      0.11      75     132 ..      56     112 ..      41     116 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 9.5e-05
                  -EEEEE------HHHHHHTTSSEEE...EE-SB---HHHHHHHHHHTT--SEEEE--- CS
   PF01135.14  75 arvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldlenvivvvgD 132
                   +vL+vG+G G l+  +a  +g++  v  i+  +    +   + k+ +l+n+++v+gD
  MMETSP1325-20131115|10546_1  56 RSVLDVGGGRGDLARAIAARFGDTQ-VTVIDTNRTSLIAGATRAKEVGLTNMTFVCGD 112
                  68*********99987777777665.56666666666667778899***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.60
# Mc/sec: 1357.94
//
Query:       MMETSP1325-20131115|10551_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 483.71
//
Query:       MMETSP1325-20131115|10552_1  [L=384]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-53  178.7   2.7    9.1e-53  178.2   1.9    1.2  1  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
    5.4e-22   77.2   0.0    9.2e-22   76.4   0.0    1.4  1  PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
    0.00023   20.8   0.5    0.00044   19.9   0.0    1.6  2  PF01637.13 Archaeal ATPase
     0.0015   18.3   0.3     0.0034   17.2   0.2    1.7  1  PF01926.18 50S ribosome-binding GTPase
      0.002   18.1   0.1     0.0046   16.9   0.0    1.6  1  PF13401.1  AAA domain
     0.0028   17.4   0.0     0.0057   16.4   0.0    1.6  1  PF13173.1  AAA domain
     0.0029   17.7   0.6     0.0046   17.1   0.4    1.3  1  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
     0.0051   16.1   0.3       0.22   10.8   0.6    2.1  1  PF00009.22 Elongation factor Tu GTP binding domain
     0.0056   16.2   0.0      0.019   14.5   0.0    1.9  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
      0.009   16.2   1.1      0.021   15.0   0.0    2.0  2  PF13238.1  AAA domain
  ------ inclusion threshold ------
      0.011   14.5   0.1      0.023   13.5   0.1    1.4  1  PF00437.15 Type II/IV secretion system protein
      0.016   15.4   0.1       0.05   13.8   0.1    2.0  1  PF13191.1  AAA ATPase domain
      0.022   13.8   0.0      0.049   12.6   0.0    1.6  1  PF03193.11 Protein of unknown function, DUF258
      0.022   13.9   0.0       0.12   11.5   0.0    2.0  2  PF12846.2  AAA-like domain
      0.022   13.7   0.0      0.041   12.8   0.0    1.4  1  PF06414.7  Zeta toxin
      0.027   14.8   0.2       0.16   12.3   0.0    2.2  2  PF08477.8  Miro-like protein
      0.027   14.0   0.0      0.076   12.6   0.0    1.7  1  PF13245.1  Part of AAA domain
      0.047   13.9   7.3       0.11   12.7   0.0    2.5  2  PF13476.1  AAA domain
      0.062   12.7   0.0       0.16   11.4   0.0    1.6  1  PF13555.1  P-loop containing region of AAA domain
      0.069   12.9   2.3       0.45   10.3   0.0    2.6  3  PF13521.1  AAA domain
       0.08   12.0   1.1       0.12   11.4   0.8    1.3  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)


Domain annotation for each model (and alignments):
>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.2   1.9   1.4e-55   9.1e-53       1     177 [.      17     202 ..      17     203 .. 0.94

  Alignments for each domain:
  == domain 1    score: 178.2 bits;  conditional E-value: 1.4e-55
                  EEEEEE-------HHHHHHHHCHS---S-EEEEES-----HCCCCCHHT-...S-.EEEE----ECC-TTS-HHHHHCCCHHHCH-T-SEEEEE----SGGGGH..HHH.SHHHHHHEEE-EEEEEEETTTH......CHHHHHHHHHHHHHCT-SEEEEE-CCCTTTT..HHHHHHHHHHH-TTSEEE CS
   PF02492.14   1 pvtvltGflGsGKTtLleklleknreglkiaVivndfgetkiDaellret...gveivelnnGciCctlredllmelealeelkeerldvlliEttGlaepapl..tft.eeelksdlgldavvtvvdvknl......tegedkpekledqlaaAdlivlnKiDlldaeadlekleedlrklnpeakvl 177
                  pvtv+tGflG+GKTtLl+ +l k++++ +iaVi+n+fge++iD+ l++e+   ++ iv++ nGc+Cct+r dl+++l+ l +++ ++++++++EttGla+pap+  tf+ + +l++++++d+vvt+vd+kn+       + +d  +++ +q+a++d i+lnK Dl++ e++ ++++e+++++n+ a+++
  MMETSP1325-20131115|10552_1  17 PVTVITGFLGAGKTTLLNYIL-KEQKEWRIAVIENEFGEVNIDEGLVTENlatKEDIVSMDNGCVCCTVRGDLVRTLNSLIARR-KDFQAIMLETTGLADPAPIiqTFNsDATLQDNFRIDCVVTLVDAKNVtqhlreIKPDDAVNEAVQQVAFSDRIILNKLDLVSPEEL-AEVKEEIESINNTATII 202
                  79*******************.8889*********************999654444***************************9.99*****************77676999********************999998778999*************************66.**************998 PP

>> PF07683.9  Cobalamin synthesis protein cobW C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.0   1.4e-24   9.2e-22       2      94 .]     285     380 ..     284     380 .. 0.96

  Alignments for each domain:
  == domain 1    score: 76.4 bits;  conditional E-value: 1.4e-24
    PF07683.9   2 ssfvfrarrpfdperleallee....lpegvlRaKGivwlagkpd.alvlqgvggrlrlepagawwaaledgdrrseLVfIGrdldkealeeaLdacl 94 
                   s+ +r++ +fd ++++ ++++    ++++++R+KG++ +ag+ d ++v+qgv++ ++++p + + ++   ++r+s LVfIGr+l++e+l+++L++cl
  MMETSP1325-20131115|10552_1 285 ASVGMRFNTDFDVAKFNMFMSTllqaKSADIYRSKGVLAFAGQGDtRFVFQGVHENINFGPSSVPFKE--GEKRQSTLVFIGRGLNREELQAGLNECL 380
                  68999*****************998888***************999**********************..***************************7 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   6.7e-07   0.00044      17      52 ..      13      48 ..       9      74 .. 0.84
   2 ?   -3.2   0.1       7.6   4.9e+03      97     116 ..     176     195 ..     142     203 .. 0.48

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 6.7e-07
                 H..-SEEEEE--TT---HHHHHHHHHH-..---HHH CS
   PF01637.13 17 repnsiiviyGprrsGKTaLlkeileelkekgkrvv 52
                 +e+ +++vi G  + GKT+Ll+ il+e ke+ + v+
  MMETSP1325-20131115|10552_1 13 EEKTPVTVITGFLGAGKTTLLNYILKEQKEWRIAVI 48
                 67899*************************998664 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 7.6
                  TS-GG.G--HHHHHHHHHH- CS
   PF01637.13  97 kksklvflaleellealkkk 116
                  k      + l+e++e++++ 
  MMETSP1325-20131115|10552_1 176 KLDLVSPEELAEVKEEIESI 195
                  33333344444555444444 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.2   5.2e-06    0.0034       3      94 ..      20     158 ..      18     211 .. 0.60

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 5.2e-06
                  EEE--TT---HHHHHHHHCSTCTE...................ETS-TT-SSSESEEEE.......................ETTE...EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTSHHHH........H CS
   PF01926.18   3 aivGrpNvGKStLinaLtgekaak...................vsdypgtTrditenev.......................kkek...iilvDtPGiiegasedkeiegikkylekveradvlllvvdasavlke........a 94 
                  +i G   +GK+tL+n +++e++ +                   v++   t +di+   +                          k    i++ t G++++a+  +   + + +l+   r+d ++ +vda++v+++        a
  MMETSP1325-20131115|10552_1  20 VITGFLGAGKTTLLNYILKEQK-EwriavienefgevnideglVTENLATKEDIVS--MdngcvcctvrgdlvrtlnsliarR--KdfqAIMLETTGLADPAPIIQTF-NSDATLQDNFRIDCVVTLVDAKNVTQHlreikpddA 158
                  799***************6431.233444455555555555554444444444422..0223344444555555544444332..14344788888877665555533.4666999999**********8874422223333331 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   7.1e-06    0.0046       6      36 ..      18      48 ..      13     128 .. 0.79

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 7.1e-06
    PF13401.1  6 ilvvtGesGvGKTtllrrlarqldeeaeaae 36
                 ++v+tG  G+GKTtll++++++++e+ +a  
  MMETSP1325-20131115|10552_1 18 VTVITGFLGAGKTTLLNYILKEQKEWRIAVI 48
                 789*******************999977655 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   8.8e-06    0.0057       2      39 ..      16      59 ..      15     109 .. 0.63

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 8.8e-06
    PF13173.1  2 rkilvitGpRrvGKttllkqlakell......keesilyinldd 39
                 ++++vitG  ++GKttll+ ++ke++       e+++ ++n d+
  MMETSP1325-20131115|10552_1 16 TPVTVITGFLGAGKTTLLNYILKEQKewriavIENEFGEVNIDE 59
                 5799******************9998433333333333333333 PP

>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.4   7.1e-06    0.0046      11     104 ..     173     285 ..     163     310 .. 0.61

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 7.1e-06
    PF10152.4  11 fLNrFsaecEskLveiersLqqlElklqlLeakLasid.............gleeledqd..............elpappaaarrsggpppppgaraeaaaqeaeaaraetpaeqepeala 104
                  +LN++  ++ + L+e+++++++++ + +++e+k + +d             +       +              e++a++++a+ +g+     + +++a+++++++ ++++ +++   ++a
  MMETSP1325-20131115|10552_1 173 ILNKLDLVSPEELAEVKEEIESINNTATIIESKRSIVDlgmildqkafsldK-------TleidpdllaeseeeEEEAAEPHAHADGNADGASADDGAATEPPKKK-KKKKRKQHDLSQVA 285
                  69*******************************9888888877765555440.......14433333333333344555555554444443333333333333333.33333333333444 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.6   0.00034      0.22       5     148 ..      18     194 ..      14     211 .. 0.68

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00034
                  EEEEEESTT---HHHHHHHHHHCCCCEHHHHHH...HC-........HHHCCHHHH---BBSSEEEEEE...........T...ESCEEEEEEE----GG.......GHHHHHHH.HHT-SEEEEEEETTS-S-HHHHHHHHHHHHTT--.....EEEEEE-TTST.CHHHHHHHHHHHH CS
   PF00009.22   5 nigiighvDhGKtTltdallykagaiskrgeea...egerl......ldklkeerergiTiksaaisle...........k..etkkrlinliDtPGHvd.......Fskevirg.lrvlDgavlvvdaveGvepqTeevlrlakklgvk.....iivviNKiDrv.eaeleeiveelke 148
                    +i g + +GKtTl++ +l+++++ + +  e+   e   +      + ++ + +e  ++++ + + ++              ++k+++  ++ t G +d       F ++ +      +D++v +vda++  +   e     a ++ v+       +++NK+D+v  +el e++ee+++
  MMETSP1325-20131115|10552_1  18 VTVITGFLGAGKTTLLNYILKEQKEWRIAVIENefgE---VnideglVTENLATKEDIVSMDNGCVCCTvrgdlvrtlnsLiaRRKDFQAIMLETTGLADpapiiqtFNSDATLQdNFRIDCVVTLVDAKNVTQHLREIKPDDAVNEAVQqvafsDRIILNKLDLVsPEELAEVKEEIES 194
                  5678888899999999999999888766655554330...134555566666778888999999999888888887776515599999999999999876554333354443333367799********9775555555555555555552111144689******87888888888873 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   2.9e-05     0.019       1      45 [.      17      58 ..      17      61 .. 0.87

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 2.9e-05
                 -EEEEE-------HHHHHHHHHHHHH-------EEE-SS.-TTSS CS
    PF03205.9  1 pivavvGpkdsGKTtlieklvnklkergyrvavvkhldhGqgeid 45
                 p+ +++G+ + GKTtl+  ++++ k  ++r+a v + + G+ +id
  MMETSP1325-20131115|10552_1 17 PVTVITGFLGAGKTTLLNYILKEQK--EWRIA-VIENEFGEVNID 58
                 67899***************99988..88888.778888888887 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.2e-05     0.021       2      42 ..      20      68 ..      20      81 .. 0.74
   2 ?   -1.3   0.1       3.5   2.3e+03      47      69 ..     176     200 ..     143     241 .. 0.57

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 3.2e-05
    PF13238.1  2 litGtpGvGKtTlakeLaerl........gdvlrdlakengleeevddk 42
                 +itG  G+GKtTl++++ ++              +++ ++gl++e+   
  MMETSP1325-20131115|10552_1 20 VITGFLGAGKTTLLNYILKEQkewriaviENEFGEVNIDEGLVTENLAT 68
                 69***************88866788778866666666666666666554 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 3.5
    PF13238.1  47 eskeldedkldelldkleenes..e 69 
                  + + + ++ l+e+ +++e++++   
  MMETSP1325-20131115|10552_1 176 KLDLVSPEELAEVKEEIESINNtaT 200
                  3444555555555555555555332 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.5e-05     0.023     131     170 ..      19      57 ..      14      79 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.5e-05
   PF00437.15 131 ilvsGgTgsGKttllnallaeinkdderivtiEDp.vElql 170
                   +++G  g GKttlln +l+e ++   ri +iE    E+++
  MMETSP1325-20131115|10552_1  19 TVITGFLGAGKTTLLNYILKEQKEW--RIAVIENEfGEVNI 57 
                  589*****************98888..9**99975246666 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   7.6e-05      0.05      23      65 ..      16      58 ..       6     267 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 7.6e-05
    PF13191.1 23 splllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn 65
                 +p+ ++tG  G GK++Ll+ ++k++   r ++++  f +++ +
  MMETSP1325-20131115|10552_1 16 TPVTVITGFLGAGKTTLLNYILKEQKEWRIAVIENEFGEVNID 58
                 44889***************77777666666666666665555 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   7.6e-05     0.049      36      62 ..      17      43 ..       8      81 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7.6e-05
                 SBEEEE-------HHHHHHH------- CS
   PF03193.11 36 ktsvlvGqSGvGKSsLinallpeldlk 62
                  ++v++G  G+GK++L+n +l+e++  
  MMETSP1325-20131115|10552_1 17 PVTVITGFLGAGKTTLLNYILKEQKEW 43
                 689***************999877432 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00018      0.12       2      24 ..      17      39 ..      16      48 .. 0.87
   2 ?   -0.2   0.0      0.65   4.2e+02      32      83 ..     199     266 ..     180     335 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00018
    PF12846.2  2 pntlilGppGsGKSvllkklvlq 24
                 p t+i+G +G+GK++ll++++ +
  MMETSP1325-20131115|10552_1 17 PVTVITGFLGAGKTTLLNYILKE 39
                 789****************9865 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.65
    PF12846.2  32 vviiDpggeysglaralggqvidlgegkgislNPfdigpteagaekleaea.....................d 83 
                   +ii+ + + ++l   l++++++l+++ +i  +P  +++    +e++e +a                     +
  MMETSP1325-20131115|10552_1 199 ATIIESKRSIVDLGMILDQKAFSLDKTLEI--DPDLLAE---SEEEEEEAAephahadgnadgasaddgaatE 266
                  567777777777777777788888888874..4444444...2222222222334445555544444444441 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.4e-05     0.041      10      48 ..      10      48 ..       2      54 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.4e-05
    PF06414.7 10 vpeqekpkavllgGqpGAGKtslaellleelaagnivri 48
                 vp++ek  + ++ G  GAGKt+l++ +l+e ++ +i++i
  MMETSP1325-20131115|10552_1 10 VPDEEKTPVTVITGFLGAGKTTLLNYILKEQKEWRIAVI 48
                 6788777788899****************9866555555 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00025      0.16       3      26 ..      20      49 ..      19      85 .. 0.72
   2 ?   -0.7   0.0       2.7   1.7e+03      51      71 ..     170     196 ..     129     207 .. 0.48

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00025
    PF08477.8  3 vvvGdkgvGKssllsqlvgeefp......k 26
                 v+ G  g+GK++ll+++++e+++      +
  MMETSP1325-20131115|10552_1 20 VITGFLGAGKTTLLNYILKEQKEwriaviE 49
                 799999***************996544331 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 2.7
    PF08477.8  51 l......lelwdlggreelkkehelll 71 
                         l l ++++ +e+k+e+e + 
  MMETSP1325-20131115|10552_1 170 DriilnkLDLVSPEELAEVKEEIESIN 196
                  222344444444444444444443333 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00012     0.076      10      32 ..      16      37 ..      10      45 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00012
    PF13245.1 10 npllvvtGgPGtGKTttlaaiia 32
                  p++v+tG  G+GKT tl++ i 
  MMETSP1325-20131115|10552_1 16 TPVTVITGFLGAGKT-TLLNYIL 37
                 69*************.9999875 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   0.00017      0.11      17      39 ..       8      36 ..       5      37 .. 0.79
   2 ?    0.7   3.6       0.8   5.2e+02     147     186 ..     175     269 ..     119     286 .. 0.56

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00017
    PF13476.1 17 F......skgltlItGpNGsGKTTildAi 39
                 F      + ++t+ItG  G+GKTT+l+ i
  MMETSP1325-20131115|10552_1  8 FevpdeeKTPVTVITGFLGAGKTTLLNYI 36
                 4445554569***************9866 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.8
    PF13476.1 147 kfklkekkkrleelekeleeledekellek..............................llqeeekek..........................e 186
                  ++++  + ++l+e+++e+e ++++  ++e+                              +  eee+e+                          +
  MMETSP1325-20131115|10552_1 175 NKLDLVSPEELAEVKEEIESINNTATIIESkrsivdlgmildqkafsldktleidpdllaE-SEEEEEEaaephahadgnadgasaddgaateppK 269
                  2223333346777777777777777777776666767888888888888777777765431.2222222344555555555555554444444442 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00024      0.16      20      40 ..      13      33 ..       4      37 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00024
    PF13555.1 20 dpkgkntlltGasGsGKSTll 40
                 ++k  +t++tG  G+GK+Tll
  MMETSP1325-20131115|10552_1 13 EEKTPVTVITGFLGAGKTTLL 33
                 445568**************8 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00069      0.45       3      44 ..      20      66 ..      18      89 .. 0.75
   2 ?   -2.1   0.0       4.6     3e+03     108     134 ..     133     158 ..     120     176 .. 0.53
   3 ?    1.5   0.1      0.34   2.2e+02      23      72 ..     197     245 ..     183     254 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00069
    PF13521.1  3 vitGgpstGKTtlleaLaar..gyp..vv.pEvarevleeklakgee 44
                 vitG  ++GKTtll+ + ++  +++  v+  E++   ++e+l +++ 
  MMETSP1325-20131115|10552_1 20 VITGFLGAGKTTLLNYILKEqkEWRiaVIeNEFGEVNIDEGLVTENL 66
                 9*************998644355553266888888888887766654 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 4.6
    PF13521.1 108 rydlvfllppepeieqDgeRredeeea 134
                  r d+v+ l  ++ + + + R+ ++++a
  MMETSP1325-20131115|10552_1 133 RIDCVVTLVDAKNV-TQHLREIKPDDA 158
                  55555555555544.334443333333 PP

  == domain 3    score: 1.5 bits;  conditional E-value: 0.34
    PF13521.1  23 gypvvpEvarevleeklakgeealpweedllafaeavleaqleqeaaaaa 72 
                  ++ ++ E  r +++ ++  +++a+   +++l++   +l++  e+e++aa+
  MMETSP1325-20131115|10552_1 197 NTATIIESKRSIVDLGMILDQKAFSL-DKTLEIDPDLLAESEEEEEEAAE 245
                  78889999999999999999998887.58899999999888877777643 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.8   0.00018      0.12     247     300 ..     209     290 ..     137     295 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00018
                  X............................XXXXXXXXXXXXXXXXXXXX...........XXXXXXXXXXXXXXXXXXXXXXXXX------ CS
    PF09468.5 247 a............................sdlskkreaeedaeaaesra.........ekkrkkeeeekkkkakeskgvkalkkvnasGmk 300
                                               +++++ +e           a         +     ++e +kkk+k+++++ +l +v+ +Gm 
  MMETSP1325-20131115|10552_1 209 VdlgmildqkafsldktleidpdllaeseEEEEEAAEPH---------AhadgnadgaSADDGAATEPPKKKKKKKRKQHDLSQVASVGMR 290
                  044445555555555555554333332112222233333.........233333355588889999999999999***************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       820  (0.0599766); expected 273.4 (0.02)
Passed bias filter:                      518  (0.0378877); expected 273.4 (0.02)
Passed Vit filter:                        82  (0.00599766); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.90u 0.37s 00:00:01.27 Elapsed: 00:00:00.61
# Mc/sec: 1508.53
//
Query:       MMETSP1325-20131115|10553_1  [L=425]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-63  213.9   0.0    3.4e-63  213.7   0.0    1.0  1  PF08326.7 Acetyl-CoA carboxylase, central region


Domain annotation for each model (and alignments):
>> PF08326.7  Acetyl-CoA carboxylase, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.7   0.0   2.5e-67   3.4e-63     321     706 ..       2     410 ..       1     412 [. 0.86

  Alignments for each domain:
  == domain 1    score: 213.7 bits;  conditional E-value: 2.5e-67
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.X.XXX..........XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX.XXXXX CS
    PF08326.7 321 sdesvslaalevYvrraYrayevkelqveeedkellivsWeFqlsesessrlnaekses......krvasvsdlsavvekakee...rtGvmvalksledleealaeaLerlpdatkkesagsesksepinvlnvai....seaeefsedeeliskleeilkenkeeLkaagvrrvtfivar..degeypkyftFrasdeyeEdpiiRhlePalafqLELgRLsnfdikp...lptrnrnihvYeavgkek.......qeqadkrfFlRaiirqsdlrdkissaeyliselerllldaldeLevaasns.vkrtd..........lnhiFlnfvpelnl.dlesleealasflervgerlwrLrVtqvEvrirlrdpstgekvplRviitnvsGyvvkvelYkEvkdkk.gklvfksig.skqgs 706
                  +de+++la le+Y+r  Y ++++ +++  + ++++++vs+ F+   +++  l +++s+s         +  sd++  v ++ +    r+Gv+v +   e++ +++ ++++++p  +       ++++e +n +++a      + e+++ +e  +s+++ +l +++++L+a+gvrrvtf+v+   +    p  ftFr ++++ Ed+++R++eP +afqL L RLsnf+ik    l t+  n+hvY a +k+        + ++ +rfF+R +   +++         ++se+erl+ + l++Le+ + +   + t+          +nh+Fln+v+  ++ +++ +ee++++++ r++ +l+rL+V+  E++i++r +++ ++v+lRv+++n++ yv+k+e+Y+E+ d   +  vfks++ sk+g 
  MMETSP1325-20131115|10553_1   2 EDEAMQLASLELYIRQTYITHSLMSVNGGTMEDKMPFVSFTFMSGPESTGGLDKSASTSspelskMGSDMESDMEGAVYSRIPSgvpREGVFVKCSGWEQFTANFGAIVAKIPAPE-------RKSAEAVNSIHIACldapMTLEGDNAEEAFASMASPFLGGFADSLRAQGVRRVTFMVYIngNITDLPAIFTFRLKNDFGEDSLFRNIEPSYAFQLDLLRLSNFHIKLsdsLQTQMGNVHVYSAMPKKTlaaqagmKGPLLERFFVRVVAIAPQY---------QESESERLFVESLNALELKMAEYeESYTAktkkpappltSNHLFLNIVAPSTVvKPTYMEEVVSTLMTRYSDKLTRLGVAHFELKIVCRFSEDTAPVSLRVLASNPTRYVLKTETYTEKYDAAlKTNVFKSLTpSKPGI 410
                  6999**************************************555555555555544448888754556677888888778777999*************************9988.......455788888888886655555666799999**************************9864677899***************************************9622256777789*******999999888888999*******9999976.........9999999999999999998765433333222233344448********9998879******************************************************************************888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      337  (0.0246489); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.57
# Mc/sec: 1755.95
//
Query:       MMETSP1325-20131115|10554_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.6   2.4      0.047   13.7   1.6    1.5  1  PF07028.6  Protein of unknown function (DUF1319)
      0.027   14.2   0.9      0.048   13.4   0.7    1.3  1  PF08171.6  Mad3/BUB1 homology region 2
      0.057   12.8   7.5       0.07   12.6   5.2    1.2  1  PF04156.9  IncA protein
      0.074   11.3   0.5      0.086   11.1   0.3    1.2  1  PF10459.4  Peptidase S46
      0.078   13.3   8.6       0.34   11.2   0.6    2.4  2  PF13600.1  N-terminal domain of unknown function (DUF4140)
       0.19   11.1   4.5        0.3   10.5   3.1    1.2  1  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
       0.43   10.3   2.4       0.61    9.8   1.6    1.2  1  PF04678.8  Protein of unknown function, DUF607
        2.9    7.4   5.6        7.2    6.1   3.8    1.7  1  PF01105.19 emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> PF07028.6  Protein of unknown function (DUF1319)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.6   2.8e-05     0.047      39      93 ..     104     163 ..      63     170 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.8e-05
    PF07028.6  39 v.....eqkkkleeikklskivkeqrkdlkelekeldklkkelkalrkeylkrrPLsked 93 
                  +     e  + lee+ ++++ v+e++ d+++ +++l+++++e+++l++e  + rP+ +++
  MMETSP1325-20131115|10554_1 104 MvlyeqEHVRCLEELLNITRTVNERQDDIRRESERLKQIEAEMRELTHEAAELRPMGRRE 163
                  1444333334567777777777888999***************************98765 PP

>> PF08171.6  Mad3/BUB1 homology region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.7   2.8e-05     0.048      36      68 .]     105     135 ..      99     135 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.8e-05
    PF08171.6  36 lypedseEfcleEiLAlsrkvlYkekqkkvkee 68 
                  + +e+++  cleE+L ++r v  +e+q+ +++e
  MMETSP1325-20131115|10554_1 105 VLYEQEHVRCLEELLNITRTV--NERQDDIRRE 135
                  678999999***********9..8999998876 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   5.2   4.1e-05      0.07      79     159 ..      82     171 ..      22     188 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 4.1e-05
    PF04156.9  79 lqeelsesesqlseleeeleq....leerlaeleseledleedlellqeelksleerlesleesikelakeirelr.....eeisdlkee 159
                  + + +++++++l+ +e+ele+     e++   + +el+++ +   + q + ++++erl+ +e +  el+ e +elr     e++   +++
  MMETSP1325-20131115|10554_1  82 ELAVVASEQAHLQAQEDELERsmvlYEQEHVRCLEELLNITRTVNERQDDIRRESERLKQIEAEMRELTHEAAELRpmgrrESWLTIEQS 171
                  3344555555666666666666555888888888999999999999999***************************77777655555554 PP

>> PF10459.4  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3     5e-05     0.086      98     145 ..     108     155 ..      51     164 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5e-05
    PF10459.4  98 pglrvevleritDVTkrvkaalkakedeeerakaieaelkklakecee 145
                  ++++v+ le++ ++T++v++  ++   e+er k+ieae+ +l++e +e
  MMETSP1325-20131115|10554_1 108 EQEHVRCLEELLNITRTVNERQDDIRRESERLKQIEAEMRELTHEAAE 155
                  6899**************************************999765 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   1.1    0.0089        15      34     100 ..      29      97 ..      20     110 .. 0.74
   2 ?   11.2   0.6    0.0002      0.34      58      90 ..     125     157 ..     112     159 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0089
    PF13600.1  34 sldpkSlrvsgegn.atvlsvsvrrrd.lqekdadaaseelaeleaelraled.elarleaekealeari 100
                  s+  +Sl++ +  n a v+++++r +  +  + +  + ++++++  ++r++e+ ela + +e++ l+a+ 
  MMETSP1325-20131115|10554_1  29 SISKSSLQLDVDRNeAVVSGMQLRAMLdVY-ERMLVERADMEAIACRIRDAEAsELAVVASEQAHLQAQE 97 
                  577899999999999999999988884233.346677778888888888777525666666666666664 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.0002
    PF13600.1  58 rdlqekdadaaseelaeleaelraledelarle 90 
                  +  ++ d++ +se+l+++eae+r+l++e a+l+
  MMETSP1325-20131115|10554_1 125 VNERQDDIRRESERLKQIEAEMRELTHEAAELR 157
                  3334468899*******************9986 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.1   0.00018       0.3      69     147 ..      78     154 ..      73     159 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00018
    PF07106.8  69 lsdeelnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtkeei 147
                  ++ +el+ +  e ++l+++  el++++   e+e     +el   ++   ++e++  +++ +e+L++++++++e t+e+ 
  MMETSP1325-20131115|10554_1  78 AEASELAVVASEQAHLQAQEDELERSMVLYEQEHVRCLEEL--LNITRTVNERQDDIRRESERLKQIEAEMRELTHEAA 154
                  556788888999999*********99998888876666666..59***************************9998875 PP

>> PF04678.8  Protein of unknown function, DUF607
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.6   0.00035      0.61      14      84 ..      74     157 ..      61     173 .. 0.67

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00035
    PF04678.8  14 aaaaleeagvvvvlsdgvllr.............Pkkvkklvelllellkveeeklsreeelrkrleelseelaaleeekkeid 84 
                  ++++ e+++  vv+s+  +l+              ++ +  +e+ll++++  +e+++  +  ++rl++++ e+++l++e +e++
  MMETSP1325-20131115|10554_1  74 RIRDAEASELAVVASEQAHLQaqedelersmvlyEQEHVRCLEELLNITRTVNERQDDIRRESERLKQIEAEMRELTHEAAELR 157
                  456667777777777777888444444434333333367778888888877777777777777788888888888888877765 PP

>> PF01105.19  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   3.8    0.0042       7.2     110     149 ..     109     151 ..      66     155 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0042
   PF01105.19 110 kekletles...elkkleekldsikreqkylrereerlrdtne 149
                  +e++ +le+     ++++e+ d+i+re + l++ e+++r++  
  MMETSP1325-20131115|10554_1 109 QEHVRCLEEllnITRTVNERQDDIRRESERLKQIEAEMRELTH 151
                  5566666662225667***********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       849  (0.0620977); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.58u 0.40s 00:00:00.98 Elapsed: 00:00:01.04
# Mc/sec: 506.92
//
Query:       MMETSP1325-20131115|10557_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-05   22.3   0.6    6.2e-05   22.3   0.4    3.8  4  PF07699.8 GCC2 and GCC3
  ------ inclusion threshold ------
      0.012   15.1  16.7      0.028   14.0   1.2    3.9  3  PF07562.9 Nine Cysteines Domain of family 3 GPCR
      0.016   14.5   1.7      0.016   14.5   1.2    3.0  4  PF08063.7 PADR1 (NUC008) domain


Domain annotation for each model (and alignments):
>> PF07699.8  GCC2 and GCC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   1.2     0.022        99       1      15 [.      11      25 ..       6      29 .. 0.52
   2 ?    2.9   1.4     0.016        75       1      17 [.      41      57 ..      36      67 .. 0.60
   3 ?   -3.0   0.1       1.1   4.9e+03       3      13 ..      74      84 ..      72      89 .. 0.52
   4 !   22.3   0.4   1.4e-08   6.2e-05      12      48 .]      97     134 ..      95     134 .. 0.96

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.022
    PF07699.8  1 GtylkkgnkkCepCp 15
                 Gt+l++ +++C+ C 
  MMETSP1325-20131115|10557_1 11 GTFLEAPEYNCTRCV 25
                 445554555555554 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.016
    PF07699.8  1 GtylkkgnkkCepCprG 17
                 G+y+      C++C +G
  MMETSP1325-20131115|10557_1 41 GYYSFGAAPACSECREG 57
                 44444444445555444 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 1.1
    PF07699.8  3 ylkkgnkkCep 13
                 y   +  +C  
  MMETSP1325-20131115|10557_1 74 YATGSGGTCAS 84
                 55555566654 PP

  == domain 4    score: 22.3 bits;  conditional E-value: 1.4e-08
    PF07699.8  12 epCprGtYkneegqk.kCiaCppgttTskkgsksesdC 48 
                  epCp G+ ++ ++   +C++C pg++T  +g++  + C
  MMETSP1325-20131115|10557_1  97 EPCPMGFWSPGGRHAiQCLPCLPGRVTNVTGASECETC 134
                  79**********999******************99999 PP

>> PF07562.9  Nine Cysteines Domain of family 3 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.4   0.00072       3.3      30      49 ..       7      25 ..       5      29 .. 0.85
   2 ?    2.9   0.2     0.017        79      30      51 ..      37      57 ..      36      60 .. 0.78
   3 ?   14.0   1.2   6.1e-06     0.028       7      49 ..      97     135 .]      95     135 .] 0.81

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00072
    PF07562.9 30 pCpegeisnetdettCkkCp 49
                 +C++g++++   e++C++C 
  MMETSP1325-20131115|10557_1  7 KCDAGTFLE-APEYNCTRCV 25
                 7******99.559******6 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.017
    PF07562.9 30 pCpegeisnetdettCkkCpee 51
                  C  g +s    +  C +C e+
  MMETSP1325-20131115|10557_1 37 ACGSGYYSFGA-APACSECREG 57
                 69999999944.6799999886 PP

  == domain 3    score: 14.0 bits;  conditional E-value: 6.1e-06
    PF07562.9   7 epCkpGqrkkvqkgkpkCCfdCvpCpegeisnetdettCkkCp 49 
                  epC+ G++     g++    +C+pC  g + n t++ +C++C+
  MMETSP1325-20131115|10557_1  97 EPCPMGFWSPG--GRH--AIQCLPCLPGRVTNVTGASECETCD 135
                  67888888743..444..359*********************5 PP

>> PF08063.7  PADR1 (NUC008) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.8       0.2   8.9e+02      19      35 ..       7      22 ..       4      30 .. 0.65
   2 ?   -1.8   1.3      0.41   1.9e+03      20      32 ..      30      42 ..      19      44 .. 0.61
   3 ?   14.5   1.2   3.4e-06     0.016      10      35 ..      44      69 ..      40      75 .. 0.94
   4 ?   -2.8   0.3      0.85   3.9e+03      16      20 ..     130     134 ..     128     135 .] 0.79

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.2
    PF08063.7 19 eCsggqlvfngsaYvCt 35
                 +C  g+ +  ++ Y Ct
  MMETSP1325-20131115|10557_1  7 KCDAGTFLEAPE-YNCT 22
                 466666666665.8887 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.41
    PF08063.7 20 CsggqlvfngsaY 32
                 Csgg  v  gs Y
  MMETSP1325-20131115|10557_1 30 CSGGLKVACGSGY 42
                 6666666666655 PP

  == domain 3    score: 14.5 bits;  conditional E-value: 3.4e-06
    PF08063.7 10 lfGalekCpeCsggqlvfngsaYvCt 35
                  fGa   C+eC++g l++ng +Y C+
  MMETSP1325-20131115|10557_1 44 SFGAAPACSECREGWLCSNGLTYPCE 69
                 69***********************7 PP

  == domain 4    score: -2.8 bits;  conditional E-value: 0.85
    PF08063.7  16 kCpeC 20 
                  +C++C
  MMETSP1325-20131115|10557_1 130 ECETC 134
                  69999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 673.98
//
Query:       MMETSP1325-20131115|10558_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-11   44.2   0.7    1.3e-10   41.3   0.1    1.9  1  PF12796.2  Ankyrin repeats (3 copies)
    2.1e-11   42.9   6.2    9.9e-07   28.1   0.1    4.0  4  PF00023.25 Ankyrin repeat
    2.5e-09   36.9   1.3    1.2e-07   31.5   0.2    3.1  3  PF13857.1  Ankyrin repeats (many copies)
    1.5e-05   25.2   0.1      0.012   16.0   0.0    2.6  3  PF13637.1  Ankyrin repeats (many copies)
    0.00061   19.6   2.6      0.022   14.8   0.0    3.7  4  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.1   4.8e-14   1.3e-10       7      67 ..      59     122 ..      56     127 .. 0.91

  Alignments for each domain:
  == domain 1    score: 41.3 bits;  conditional E-value: 4.8e-14
    PF12796.2   7 ngnlelvklLlekgadvdl.....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAv 67 
                  ng + +v lL+++gad+++     + tpL+ A+ +g+ e+++lLl+aga+ n++  + + pL++A 
  MMETSP1325-20131115|10558_1  59 NGFATCVSLLMAAGADPNVlskqgNHTPLMGACLSGDAECCRLLLQAGAEANNE--SFYGPLMAAS 122
                  677889**************9998888*************************98..7888999995 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.028        77      12      31 ..       2      21 ..       1      23 [. 0.90
   2 !   12.4   0.1   3.3e-05     0.091       5      31 ..      31      78 ..      29      80 .. 0.79
   3 !   28.1   0.1   3.6e-10   9.9e-07       3      29 ..      84     110 ..      83     113 .. 0.93
   4 ?   -2.3   0.0       1.5   4.2e+03       5      10 ..     117     122 ..     117     123 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.028
                 TTHHHHHHHHHHTTSSTTHB CS
   PF00023.25 12 rgnlevvklLlsqGAdlnaq 31
                 +gn +v+   l +G d++a+
  MMETSP1325-20131115|10558_1  2 HGNSDVLAAYLHAGGDPTAC 21
                 799**************996 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 3.3e-05
                 HHHHHHHTT.....................HHHHHHHHHHTTSSTTHB CS
   PF00023.25  5 PLHlAalrg.....................nlevvklLlsqGAdlnaq 31
                  LHlA  +                       + +v+lL  +GAd+n+ 
  MMETSP1325-20131115|10558_1 31 LLHLATGCAtamggvassyrtrpepdcpngFATCVSLLMAAGADPNVL 78
                 577777777777777777778888888888999*************85 PP

  == domain 3    score: 28.1 bits;  conditional E-value: 3.6e-10
                  CBHHHHHHHTTHHHHHHHHHHTTSSTT CS
   PF00023.25   3 fTPLHlAalrgnlevvklLlsqGAdln 29 
                   TPL+ A+l+g++e+++lLl++GA+ n
  MMETSP1325-20131115|10558_1  84 HTPLMGACLSGDAECCRLLLQAGAEAN 110
                  6***********************988 PP

  == domain 4    score: -2.3 bits;  conditional E-value: 1.5
                  HHHHHH CS
   PF00023.25   5 PLHlAa 10 
                  PL+ A+
  MMETSP1325-20131115|10558_1 117 PLMAAS 122
                  9**997 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.088   2.4e+02      26      47 ..       2      23 ..       1      35 [. 0.77
   2 !    8.3   0.0   0.00092       2.5      26      49 ..      59      82 ..      57      84 .. 0.90
   3 !   31.5   0.2   4.6e-11   1.2e-07       4      51 ..      71     119 ..      68     122 .. 0.91

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.088
    PF13857.1 26 ggalevvrlLlapgadlnlrds 47
                 +g+++v+   l++g d++++  
  MMETSP1325-20131115|10558_1  2 HGNSDVLAAYLHAGGDPTACSR 23
                 5888999999999999888875 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00092
    PF13857.1 26 ggalevvrlLlapgadlnlrdsdg 49
                 +g +++v lL a+gad+n+  ++g
  MMETSP1325-20131115|10558_1 59 NGFATCVSLLMAAGADPNVLSKQG 82
                 8999****************9998 PP

  == domain 3    score: 31.5 bits;  conditional E-value: 4.6e-11
    PF13857.1   4 hgpadvnatdeggn.tpLhlAakggalevvrlLlapgadlnlrdsdg.lt 51 
                  +g ad+n + ++gn tpL+ A+  g++e++rlLl++ga +n   ++g l 
  MMETSP1325-20131115|10558_1  71 AG-ADPNVLSKQGNhTPLMGACLSGDAECCRLLLQAGAEANNESFYGpLM 119
                  67.99**************************************9999665 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.86   2.3e+03      34      41 ..      28      35 ..       2      38 .. 0.61
   2 !   16.0   0.0   4.3e-06     0.012      17      54 .]      65     103 ..      62     103 .. 0.93
   3 !   13.6   0.0   2.5e-05     0.067       1      28 [.      83     110 ..      83     123 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.86
    PF13637.1 34 GntaLhiA 41
                  +++Lh+A
  MMETSP1325-20131115|10558_1 28 AWSLLHLA 35
                 46666666 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 4.3e-06
    PF13637.1  17 vklLlekgidinrtdesGn.taLhiAalrgnieilklLl 54 
                  v lL + g+d+n + ++Gn t+L  A+l g+ e+++lLl
  MMETSP1325-20131115|10558_1  65 VSLLMAAGADPNVLSKQGNhTPLMGACLSGDAECCRLLL 103
                  6678899************99*****************8 PP

  == domain 3    score: 13.6 bits;  conditional E-value: 2.5e-05
    PF13637.1   1 gltaLhyaaisgrlelvklLlekgidin 28 
                  ++t+L+ a+ sg+ e+++lLl+ g++ n
  MMETSP1325-20131115|10558_1  83 NHTPLMGACLSGDAECCRLLLQAGAEAN 110
                  589*********************9955 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.1   3.1e+03      12      28 ..       2      18 ..       1      20 [. 0.77
   2 ?    0.7   0.3      0.29   7.8e+02       3       9 ..      29      35 ..      19      41 .. 0.68
   3 ?    0.9   0.0      0.26     7e+02      13      29 ..      60      76 ..      57      77 .. 0.72
   4 !   14.8   0.0   8.1e-06     0.022       3      29 ..      84     110 ..      81     111 .. 0.90

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 1.1
    PF13606.1 12 ngrielveaLlengadi 28
                 +g+ +++ a+l +g d+
  MMETSP1325-20131115|10558_1  2 HGNSDVLAAYLHAGGDP 18
                 68889999988888775 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.29
    PF13606.1  3 nTpLhlA 9 
                 +++LhlA
  MMETSP1325-20131115|10558_1 29 WSLLHLA 35
                 4556665 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.26
    PF13606.1 13 grielveaLlengadin 29
                 g    v++L  +gad+n
  MMETSP1325-20131115|10558_1 60 GFATCVSLLMAAGADPN 76
                 55566788888999999 PP

  == domain 4    score: 14.8 bits;  conditional E-value: 8.1e-06
    PF13606.1   3 nTpLhlAasngrielveaLlengadin 29 
                   TpL+ A+ +g  e +++Ll++ga  n
  MMETSP1325-20131115|10558_1  84 HTPLMGACLSGDAECCRLLLQAGAEAN 110
                  5**********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 663.99
//
Query:       MMETSP1325-20131115|10561_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       502  (0.0367174); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 289.37
//
Query:       MMETSP1325-20131115|10560_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-16   58.9   0.0    5.4e-16   58.7   0.0    1.0  1  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
    1.7e-06   28.2   0.1    2.1e-06   27.9   0.1    1.1  1  PF03807.12 NADP oxidoreductase coenzyme F420-dependent
    9.3e-05   22.0   0.5    0.00035   20.2   0.4    1.8  1  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
    0.00066   19.8   0.1    0.00086   19.5   0.1    1.2  1  PF01118.19 Semialdehyde dehydrogenase, NAD binding domain
     0.0011   17.6   0.1     0.0018   16.9   0.1    1.3  1  PF02423.10 Ornithine cyclodeaminase/mu-crystallin family
     0.0013   17.8   0.0     0.0014   17.7   0.0    1.1  1  PF02826.14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
  ------ inclusion threshold ------
      0.025   14.9   0.0      0.035   14.4   0.0    1.1  1  PF02629.14 CoA binding domain


Domain annotation for each model (and alignments):
>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.0   2.8e-19   5.4e-16       2     112 ..      12     128 ..      11     129 .] 0.90

  Alignments for each domain:
  == domain 1    score: 58.7 bits;  conditional E-value: 2.8e-19
                  BEBEEB-------HHHHHH..HH---EEEE--SSHHHHHHHHHTT...EEE-SSHHHHHHHBSEEEE-SSSHHHHHHHHHH..HCCC-----EEEE-S---HHHHHHHHHHHHH--- CS
   PF03446.10   2 kkigfiGlGvMGspmalnl..lkagyevavynrtkekveelvaeg...akaaesieelvasldvvilmvkagkavdeviege.llealekgdilidgstsspedtrelakelkekgl 112
                  kk  fiGlG +G+ +a ++  +++  +++v++++++  ++l +++   ++ a++++++v++++v++++++ +++v++v ++    +al++g++++d+++ +p+ +  +a  l+e+g+
  MMETSP1325-20131115|10560_1  12 KKASFIGLGAIGKVLAGRVagAEELSSLSVFDLNPAPGKSLEESHagkVTSATDLADAVSDAQVILTCLPRSSNVKSVADELvAKQALAPGSVWVDCTSGDPTFAATIAGVLEEAGC 128
                  6779***************55577799********999999888766688999999999999******************96566999********************999999886 PP

>> PF03807.12  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.1   1.1e-09   2.1e-06       3      95 ..      15     110 ..      13     111 .. 0.77

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 1.1e-09
   PF03807.12   3 giiGaGnigealakglaaaga.qkheviiaasrspekaeelaeelgvkvtavsneeaaeeadvvilavkpe.dveevlael...kealkgklvisvla 95 
                   +iG G ig+ la ++a a + +  +v    ++ p k  e   + +v+  + + ++a+++a v++ +++ + +v++v++el   +++  g++ ++++ 
  MMETSP1325-20131115|10560_1  15 SFIGLGAIGKVLAGRVAGAEElSSLSVF-DLNPAPGKSLEESHAGKVTSAT-DLADAVSDAQVILTCLPRSsNVKSVADELvakQALAPGSVWVDCTS 110
                  69*****************975555555.4466665555555555565555.99**************98537999****999777778899999986 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.4   1.8e-07   0.00035       2     106 ..      14     112 ..      13     127 .. 0.80

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 1.8e-07
                  EEEE-------HHHHHHHTTE..EEEEEE-S-HHHHHHHHHHTSBTTTBTT-B--TTEEEES-HHHHH----CEEE-S-.HHHHHHHCCCHCCCH..HCT-EEEE----- CS
   PF01210.18   2 vavlGaGswGtalAkvlaeng..hevrlWvreeklieeinerrenvkylpgiklpenlvattDleealkgadiivlvVP.sqflrevlkklkgll..kkdailvsltKGi 106
                   + +G G++G  lA  +a     ++ ++++ +++  ++++e +             +++  tDl++a+++a++i+  +P s  +++v+++l ++   ++++++v +t G 
  MMETSP1325-20131115|10560_1  14 ASFIGLGAIGKVLAGRVAGAEelSSLSVFDLNPAPGKSLEESHA-----------GKVTSATDLADAVSDAQVILTCLPrSSNVKSVADELVAKQalAPGSVWVDCTSGD 112
                  578999********999877756888888888899999999998...........468999******************55789******97765559999999999885 PP

>> PF01118.19  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   4.4e-07   0.00086       2      98 ..      14     110 ..      13     125 .. 0.78

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 4.4e-07
                  EEEB--------HHHHHHHCTSSEEEEEEEETTTT---BHHHHSGGGCCCCCEBEEEGCGCCCTC-SEEEE---HH.HHHHHHHCH.....HHTTSEEEE-SS CS
   PF01118.19   2 vaivGatGyvGqellrlLeehpelelvalvassrsaGkklaeahkaleegkdlvledadeeelkevdivflalpag.vskelapkl.....leagvkviDlss 98 
                  + ++G  G++G++l  + +  +el+ + ++  ++  Gk l+e h     gk    +d  +++++++++++++lp +   k++a++l     l+ g +++D +s
  MMETSP1325-20131115|10560_1  14 ASFIG-LGAIGKVLAGRVAGAEELSSLSVFDLNPAPGKSLEESHA----GKVTSATD-LADAVSDAQVILTCLPRSsNVKSVADELvakqaLAPGSVWVDCTS 110
                  67899.9************************************88....55555555.56788**********975234444444411112666779999765 PP

>> PF02423.10  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   9.2e-07    0.0018     128     216 ..      10      95 ..       4     114 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 9.2e-07
                  T---B--B----HHHHHHHHHHHHS----EEE--SSCHHHHHHHHHHH..H----EEE-THHHHTSSSEEEE----SS..-SB-CCC-- CS
   PF02423.10 128 dastlaiiGaGvqaetqlealsavlpieeiriydideeaaekfaenvqefefevvavksaeeavegadivvTvTaakeaapilkaewvk 216
                    +++ +iG G+ +++ +  +    ++  ++++d+++   +++ e  ++   +v+ +++ ++av++a+++ T+ +  ++   + +e v 
  MMETSP1325-20131115|10560_1  10 PTKKASFIGLGAIGKVLAGRVAGAEELSSLSVFDLNPAPGKSLEESHAG---KVTSATDLADAVSDAQVILTCLPRSSNVKSVADELVA 95 
                  5678899***********99999999************99999999888...*********************9999986666666554 PP

>> PF02826.14  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   7.1e-07    0.0014      37     110 ..      12      91 ..       4     125 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 7.1e-07
                  SEEE-B-------HHHHHHHH---..EEEE--SS--.....HHHH---..EE--CCCCCCC-SEEEE----STTTTT-B- CS
   PF02826.14  37 ktvGiiGlGrIGqavakrlkafgm..kvlaydrskkkee..eeeelga..evvsleellaesDvvslhlpltpetrhlin 110
                  k+   iGlG+IG+ +a r+++ +    + ++d ++ + +  ee+++g   + ++l +++++++v+  +lp + + + + +
  MMETSP1325-20131115|10560_1  12 KKASFIGLGAIGKVLAGRVAGAEElsSLSVFDLNPAPGKslEESHAGKvtSATDLADAVSDAQVILTCLPRSSNVKSVAD 91 
                  77889***************7764467888888888777665555444446679****************8877666554 PP

>> PF02629.14  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.8e-05     0.035       5      86 ..      13      97 ..      10      99 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.8e-05
                 EEEEE-----..TTTHHHHHHHHEEEEEEEES-TT..T---B----BEESSHHHHHHHC.T-SEEEE-S-.HHHHHHHHHHHHH-- CS
   PF02629.14  5 kviviGasglgiqllyhfkellkygikkvfgvnpr..kvgtevggipvyksvdeleekv.dvdvavitvP.aeeaqeaidelveag 86
                 k   iG +  g+ l+ +++   + +  +vf+ np   k  +e +  +v  s  +l + v d++v ++++P + ++++++delv+++
  MMETSP1325-20131115|10560_1 13 KASFIGLGAIGKVLAGRVAGAEELSSLSVFDLNPApgKSLEESHAGKVT-SATDLADAVsDAQVILTCLPrSSNVKSVADELVAKQ 97
                 566788888888888888888888999******9844666888999999.888888888669998889973678*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      313  (0.0228935); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 606.14
//
Query:       MMETSP1325-20131115|10556_1  [L=491]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.069   12.5   0.7       0.13   11.7   0.5    1.4  1  PF11995.3  Domain of unknown function (DUF3490)
        1.4    8.0   8.5        2.3    7.3   5.9    1.3  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF11995.3  Domain of unknown function (DUF3490)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.5   1.8e-05      0.13      69     141 ..      88     163 ..      73     184 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.8e-05
    PF11995.3  69 lassikalkrerellakrlekkl...tkeereelykkwgveleskrrrlqlvnklWsdtkdlehvkesaslvaklv 141
                   + ++  lk+er+ll  rl+      +++ ++  +  +    +sk+r+  l++ +W +++  ++v   a+  a++v
  MMETSP1325-20131115|10556_1  88 NNIAAERLKKERSLLYDRLKASSkekKNKTKNDAFFDFFGLTDSKKRKQTLAQCVWDEPTLRKEVARLADASAQVV 163
                  45567889*******9998643300023334445555544579**************9988888876665555443 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   5.9   0.00034       2.3     212     293 ..     342     428 ..     264     451 .. 0.64

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00034
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........................................ CS
   PF04652.11 212 edsdssapgldadeasaspseapssspgvpsfpspdeseasnkdsqlPsaPty.........aqknssssqsvfPpsseeeetssssppst 293
                     + s++g+ ++++++s++ + ++ p++ ++ +++++++s++++qlPs+P           +     s+ sv+   s  e ts+s++p+ 
  MMETSP1325-20131115|10556_1 342 GSLQRSTFGSVSEPSHSSSNVSGNALPPSGQSNASADDTKSPTSPQLPSPPPSglsnhsaasG----LSAASVASVDSSAEGTSPSTAPAS 428
                  334466777777777777777777777776666777777777788888888664544422221....222222222222222222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       581  (0.0424956); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.39s 00:00:01.23 Elapsed: 00:00:00.52
# Mc/sec: 2262.71
//
Query:       MMETSP1325-20131115|10559_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-23   81.6   2.8      3e-11   43.2   0.0    3.3  3  PF00415.13 Regulator of chromosome condensation (RCC1) repeat
      9e-11   40.9  12.5    9.7e-08   31.3   0.1    3.3  3  PF13540.1  Regulator of chromosome condensation (RCC1) repeat


Domain annotation for each model (and alignments):
>> PF00415.13  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   2.5e-12   1.7e-08       5      50 ..       2      53 ..       1      54 [. 0.96
   2 !   43.2   0.0   4.4e-15     3e-11       1      50 [.      57     108 ..      57     109 .. 0.98
   3 ?    2.9   0.1     0.017   1.2e+02       2       8 ..     113     119 ..     112     122 .. 0.92

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 2.5e-12
                 EEE---------.......--------S-EE-GGG------EEE-----EEE CS
   PF00415.13  5 ysWGrndyGqLG......kggseenvlvPvkveglsgvrvvqvacGgsHtla 50
                 + WG   +GqLG       g++ +  l P+++  + ++ +v+va+G+ Htl+
  MMETSP1325-20131115|10559_1  2 FLWGSAKWGQLGgseaqtTGNDVKASLLPRQLIPPDSRGIVSVAAGDGHTLV 53
                 89*****************************9999999************97 PP

  == domain 2    score: 43.2 bits;  conditional E-value: 4.4e-15
                  TTEEEEE---------...--------S-EE-GGG------EEE-----EEE CS
   PF00415.13   1 dGrVysWGrndyGqLG..kggseenvlvPvkveglsgvrvvqvacGgsHtla 50 
                  dG+V s+Gr+++GqLG    g + +++ P+++  l   +vv vacG+ H+l+
  MMETSP1325-20131115|10559_1  57 DGDVLSFGRGREGQLGlgAIGPSADRSEPQLIHALGADHVVEVACGALHSLC 108
                  8*****************99******************************97 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.017
                  TEEEEE- CS
   PF00415.13   2 GrVysWG 8  
                  GrVy WG
  MMETSP1325-20131115|10559_1 113 GRVYLWG 119
                  9****** PP

>> PF13540.1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.8      0.19   1.3e+03      23      30 .]       4      11 ..       4      11 .. 0.95
   2 !   31.3   0.1   1.4e-11   9.7e-08       1      30 []      41      70 ..      41      70 .. 0.98
   3 !   16.7   0.4   5.3e-07    0.0036       1      24 [.      96     119 ..      96     120 .. 0.96

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.19
                 E---TTST CS
    PF13540.1 23 WGsNssGQ 30
                 WGs  +GQ
  MMETSP1325-20131115|10559_1  4 WGSAKWGQ 11
                 *******9 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 1.4e-11
                 --EEE-----EEEE-.---EEEE---TTST CS
    PF13540.1  1 VvsvsaGgyHtcaLtsdGaVlcWGsNssGQ 30
                 +vsv+aG+ Ht++ t+dG+Vl++G++  GQ
  MMETSP1325-20131115|10559_1 41 IVSVAAGDGHTLVATTDGDVLSFGRGREGQ 70
                 79***************************9 PP

  == domain 3    score: 16.7 bits;  conditional E-value: 5.3e-07
                  --EEE-----EEEE-.---EEEE- CS
    PF13540.1   1 VvsvsaGgyHtcaLtsdGaVlcWG 24 
                  Vv v++G+ H++  t+ G+V+ WG
  MMETSP1325-20131115|10559_1  96 VVEVACGALHSLCRTEAGRVYLWG 119
                  789********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       538  (0.0393505); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.39s 00:00:00.99 Elapsed: 00:00:00.52
# Mc/sec: 1202.79
//
Query:       MMETSP1325-20131115|10563_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-12   45.9   0.2    2.8e-12   45.9   0.1    1.9  2  PF02817.12 e3 binding domain
  ------ inclusion threshold ------
       0.12   11.9   0.0       0.17   11.4   0.0    1.3  1  PF11007.3  Spore coat associated protein JA (CotJA)


Domain annotation for each model (and alignments):
>> PF02817.12  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.1   4.1e-16   2.8e-12       5      37 ..      20      52 ..      17      53 .. 0.96
   2 ?   -2.0   0.5      0.37   2.5e+03       6      12 ..      63      69 ..      59      74 .. 0.57

  Alignments for each domain:
  == domain 1    score: 45.9 bits;  conditional E-value: 4.1e-16
                 BSHHHHHHHHHTT--GGG---------B-HHHH CS
   PF02817.12  5 asPaaRkLAaekgidLsqvkGTGpgGRItkeDV 37
                 ++PaaR +A+ k id+++++GTG++GRItk D+
  MMETSP1325-20131115|10563_1 20 LTPAARMMAETKAIDVRALAGTGRHGRITKGDI 52
                 69******************************8 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.37
                 SHHHHHH CS
   PF02817.12  6 sPaaRkL 12
                  P+a+  
  MMETSP1325-20131115|10563_1 63 PPLAKAA 69
                 5666543 PP

>> PF11007.3  Spore coat associated protein JA (CotJA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.6e-05      0.17      22      34 ..      55      67 ..      51      71 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.6e-05
    PF11007.3 22 ALkrGTiFpeLyl 34
                 AL +GT+Fp L +
  MMETSP1325-20131115|10563_1 55 ALNAGTVFPPLAK 67
                 9********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 402.59
//
Query:       MMETSP1325-20131115|10564_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00034   19.6   0.2    0.00043   19.3   0.1    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
       0.15   11.2   0.5       0.19   10.8   0.3    1.1  1  PF07062.7  Clc-like
        4.9    7.6   6.6         33    5.0   3.1    2.2  2  PF11493.3  Thylakoid soluble phosphoprotein TSP9


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.1   9.5e-08   0.00043     229     259 ..      77     107 ..      71     128 .. 0.77

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 9.5e-08
                  TT---EEEEEESS-TT-EEEEETTEEEEE-H CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00443.24 229 lssGHYvayvknneknkWlkfdDetvtevke 259
                  +++ HYv+y+++++ + W+ fdD++v+    
  MMETSP1325-20131115|10564_1  77 PHKHHYVVYCYDTATQLWILFDDDKVQVAGR 107
                  7889**********************98764 PP

>> PF07062.7  Clc-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.3   4.3e-05      0.19      46     101 ..      73     127 ..      58     131 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 4.3e-05
    PF07062.7  46 dCtraekhvvksqdvdegplhCvYkFdidallvyseklevidedsavgelethkFy 101
                   C +++kh   ++ +d    + +  Fd d+++v   + +++ +++++g++  h F+
  MMETSP1325-20131115|10564_1  73 FCFQPHKHHYVVYCYDT-ATQLWILFDDDKVQVAGRTYQEVVDNCSAGGFMPHVFF 127
                  47777887777777765.8899*******************************998 PP

>> PF11493.3  Thylakoid soluble phosphoprotein TSP9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   3.1    0.0072        33      44      73 ..      24      54 ..      14      60 .. 0.68
   2 ?    2.8   0.0     0.035   1.6e+02      29      54 ..     127     151 ..     109     166 .. 0.74

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0072
    PF11493.3 44 Psgstvg.kkatakkpaksaakeegGdGGfn 73
                 P ++t + + +ta+++a +aa+e+g  GG  
  MMETSP1325-20131115|10564_1 24 PHTATAApTTTTATAGASGAADEGGALGGSG 54
                 4444444166778899999999998778743 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.035
    PF11493.3  29 llEtdPlLkkvdeksPsgstvgkkat 54 
                  ++E +P ++    ++Ps st++  a 
  MMETSP1325-20131115|10564_1 127 FYEREPSINPK-TRPPSNSTTAAAAL 151
                  88999988865.56689999887663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       501  (0.0366442); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 800.38
//
Query:       MMETSP1325-20131115|10565_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.57
# Mc/sec: 289.22
//
Query:       MMETSP1325-20131115|10567_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.62
# Mc/sec: 506.33
//
Query:       MMETSP1325-20131115|10566_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.17   11.4   5.3       0.25   10.9   3.7    1.3  1  PF02809.15 Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   3.7   1.8e-05      0.25       2      16 ..      76      90 ..      75      92 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.8e-05
                 CCHHHHHHHHHHHHH CS
   PF02809.15  2 sEEedLqlALalSle 16
                 +E edL+lA+++Sl+
  MMETSP1325-20131115|10566_1 76 QEQEDLALAMSMSLS 90
                 5779*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|10562_1  [L=733]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.9e-96  321.7   7.5    3.5e-69  233.4   4.2    2.9  2  PF09773.4 Meckelin (Transmembrane protein 67)


Domain annotation for each model (and alignments):
>> PF09773.4  Meckelin (Transmembrane protein 67)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.0   1.6e-28   2.2e-24     196     392 ..      17     211 ..      10     221 .. 0.83
   2 !  233.4   4.2   2.6e-73   3.5e-69     413     853 .]     274     733 .]     247     733 .] 0.80

  Alignments for each domain:
  == domain 1    score: 85.2 bits;  conditional E-value: 1.6e-28
    PF09773.4 196 afavgsnrelsCelslekllndasetlfyevflealsneselvlvplvvlvenlkiepqnlrqeevksis..ewglvrRiflvdalsskkekslea....stpeyirvvrkieivlelvdksqeervltPlvtlqyssieikdaartslsasqlvdftlavqyelskkeadvileialivlcvLallsallrtygwkrrrqse 392
                   + +g+ ++ + e +le ll  + e++fye+fl    +e++  ++p++vl  +++++  n+ + +   i   + ++vrR+ l+d+ls  ++ s++       p +ir+++ki +++  v++++ +++++P++ l+y++ e+   +  s s+ +   + ++ +y+++ +++  +++  + v+cvLa +++ +r+ +w rr+  +
  MMETSP1325-20131115|10562_1  17 WLRFGHGYNKNFECDLETLL--NDEPMFYELFLV---DEETGNMMPVPVLLRDYRDSSLNFLNVNEYDIDegNDVFVRRFMLYDTLSGVSDSSSTDdegnYIPDVIRYANKITLSV-QVQDTSAGKIFPPILSLTYKERELA--SWDSDSNMKRDFIFFRAEYSMKVSNYEDVVIAFFSVACVLAGITWTMRVNNWSRRNFRM 211
                  5678888888888899****..789********9...55555667777777777777776666664445411678************999999888888899**************.8888999***************995..4567777777778899**********999999***********************8665 PP

  == domain 2    score: 233.4 bits;  conditional E-value: 2.6e-73
    PF09773.4 413 vfflvtllaslylfiffkaQktvsvllll......evsnyellkallyvafalkaiqvlaklieqssadlFvIDWErskgqllrekrkeeeleeeespVSiWRtlfvANelnelqvvrkisplfqvlivlfflegLgfqkyaesvpvssaeqslvtysltiLryalvtfvwllvglvqvileaqlyerfvk.nplqkFvDLCsvsNiSvliLseeqfGYYIHGesihghadtsmeelqsnLrrEaqgklpvRGL..vkds....dlqtfevfvgrelrqyleriyaeieeekqrgelksessisk.kkwhll..............lgl.erksl....aynsvnkflksfInevlkkdvryailkeKslleklldlepdelymngpqkgdk...sgkdlfyiDdvfsysrvllyGleldllvldlllfasvdlatqnlllaavltyavevllrwirreegrrNiseKTliDdRFli 853
                  + f +++++  y+f+ffk+Q+tv v+l+       e ++y ++ +l+y+ f  +   +++ +++q++ad+F+ID+Er++g+              e pVS+WRt+f ANe+nelq+ r  s  f+++++ ++l+g  +   a  +p+    ++  + ++ iLr+a  t  +++  l q+ ++ ++++ f    + q F+D C+++ iSvl+L+e+ +GYY+H  s+h+hadt+m  l + L  E  g+   RG+  ++d     d+q f+++++      ++ i++ +e e +++  k++ss ++   + +                 l er+      a + +nk l+ fI + lk d+   +    sl+  l+  +p  ++  g+   ++        +     +sy  v +yG e dl   ++l fa++d   ++ + ++v t+a   llr+ r   g +N++++Tl+D  Fli
  MMETSP1325-20131115|10562_1 274 FYFPFIFFLCTYWFVFFKMQDTVYVMLPPsnnfenEDDDYYIVWVLIYLCFFCQSTWIIHLIYRQCTADVFFIDYERPHGKDRA-----------ETPVSVWRTIFAANEWNELQTARPTSLSFTLFVITMVLIGWKREYLATPQPNMNDFTE-RDLNM-ILRFANTTWWFVVLELFQLGFNWMMIY-FGRePKDQLFIDFCTMAKISVLVLDERYHGYYLHCDSPHAHADTDMATLTERLLAEESGHSTARGIpvLGDReeyrDIQCFDIYLTDGWSRWFNDIRKYLEREARQAGPKNNSSGKAgDMPAYRaqqrqsrsflrnttT-LrERHAHlevgAMEIINKGLRMFISQGLKDDLFWDVSPPQSLFGALIKTPPPDIS--GRAAYNVltpDRLHRYTCTGTYSYAGVHFYGIEWDLWLHNALTFAMFDFWFKDTATSVVCTWAIYQLLRFFRGYFGAANLANRTLVDSTFLI 733
                  45778999******************985556665788899999**********************************996432...........479************************************9999999999887654333.34455.9*****999999999*99999988888.666377788********************************************************733444478999********987766666666555555555555555555444455554444444444466531.2122221111255667888888888888877777777788888888888776653..333333322144455666789**********************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (733 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       546  (0.0399356); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.14u 0.35s 00:00:01.48 Elapsed: 00:00:00.60
# Mc/sec: 2927.55
//
Query:       MMETSP1325-20131115|10569_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|10570_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.089   11.8   1.2      0.093   11.8   0.8    1.0  1  PF00865.13 Osteopontin


Domain annotation for each model (and alignments):
>> PF00865.13  Osteopontin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.8   6.8e-06     0.093     213     256 ..       6      49 ..       2      62 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.8e-06
   PF00865.13 213 svetdsreqskeykqkasdesteasdvidsqesskvsqetqske 256
                  s e +s   s+  k+k+s +s++ s++ ds  s +vs+e   k 
  MMETSP1325-20131115|10570_1   6 SLEEHSVWLSDLSKRKSSSSSANSSAGADSAGSLQVSKERLRKF 49 
                  89************************************966544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       629  (0.0460064); expected 273.4 (0.02)
Passed bias filter:                      529  (0.0386922); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 314.52
//
Query:       MMETSP1325-20131115|10571_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 437.80
//
Query:       MMETSP1325-20131115|10568_1  [L=420]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-05   23.7   4.1     0.0034   16.7   1.7    2.7  2  PF00612.22 IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.086   12.4   6.2       0.14   11.7   4.3    1.3  1  PF08145.7  BOP1NT (NUC169) domain
       0.75    9.8   3.9       0.21   11.5   0.4    1.8  2  PF11367.3  Protein of unknown function (DUF3168)
        8.5    5.5  14.9       0.27   10.4   5.0    2.3  3  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF00612.22  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   1.7   9.9e-07    0.0034       2      20 ..      52      70 ..      51      71 .. 0.92
   2 !    5.9   0.0    0.0031        11       3      19 ..     113     129 ..     111     131 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 9.9e-07
                 HHHHHHHHHHHHHHHHCHC CS
   PF00612.22  2 kaaikIQaawRgylaRkry 20
                 +a+++IQ+ +R++l+R r+
  MMETSP1325-20131115|10568_1 52 EAIVRIQKICRAWLVRARF 70
                 69**************988 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0031
                  HHHHHHHHHHHHHHHCH CS
   PF00612.22   3 aaikIQaawRgylaRkr 19 
                  a ++IQ+a+R   a+++
  MMETSP1325-20131115|10568_1 113 ASLRIQCAVRTRNAKQE 129
                  6789******9999887 PP

>> PF08145.7  BOP1NT (NUC169) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.3   4.2e-05      0.14      24     134 ..      21     136 ..      11     156 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.2e-05
    PF08145.7  24 aldellekiddpdawrkikDkktgkkvkLtdedlelikriqkgevpeeel.....dpyeevvelfkeekeihplssapepkrrflpskseakkvaklvrairegeikpekekeeee 134
                  +l   l+++++++a r+  D+++  +++L  e +  i++i ++++ ++++      + + + e + +ek++++ +++ e+kr+ + + +e+    ++  a+r+ ++k+e e+++ e
  MMETSP1325-20131115|10568_1  21 RLRLELQAMQEEKARREAADAAEAARMRLQAEAIVRIQKICRAWLVRARFivlgdKSRSALFEAKMKEKKKKEAAKRAEEKRKKVAAMEEELASLRIQCAVRTRNAKQEVERKKAE 136
                  45555999**********************************999999875555244566778888999999*******************************9999998888765 PP

>> PF11367.3  Protein of unknown function (DUF3168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.4   6.3e-05      0.21      37     104 ..       5      75 ..       3      83 .. 0.80
   2 ?   -3.9   0.1       3.9   1.3e+04      68      82 ..      99     115 ..      94     134 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 6.3e-05
    PF11367.3  37 vssrpastltgagggdevrvqidvwsttpdraeakeiadavrdaL..lalpg.grlvalrvesaralrdrd 104
                  v +++a  +++++++++ r+ +++  ++++r+ea ++a+a+r  L   a+ + +   + ++ +ar+++  d
  MMETSP1325-20131115|10568_1   5 VVTQQAALENERREMERLRLELQAMQEEKARREAADAAEAARMRLqaEAIVRiQKICRAWLVRARFIVLGD 75 
                  5678888999999****************9999************86555666666666666666665555 PP

  == domain 2    score: -3.9 bits;  conditional E-value: 3.9
    PF11367.3  68 aeakeiadavrdaL..l 82 
                  +e +  ++a+++ L  l
  MMETSP1325-20131115|10568_1  99 EEKRKKVAAMEEELasL 115
                  44566777777777332 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.9      0.41   1.4e+03     104     146 ..      16      59 ..       3      83 .. 0.68
   2 ?   10.4   5.0     8e-05      0.27      98     139 ..      79     120 ..      43     140 .. 0.77
   3 ?   -2.1   0.0      0.51   1.7e+03     188     210 ..     223     245 ..     190     274 .. 0.56

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.41
    PF05308.6 104 rqeeekaea.lkkaneeAlqkisaLedELaaLRaQIAkIVaaqe 146
                  r+e e+++  l+  +ee  ++ +a   E a++R Q  +IV +q+
  MMETSP1325-20131115|10568_1  16 RREMERLRLeLQAMQEEKARREAADAAEAARMRLQAEAIVRIQK 59 
                  33333332224555666667777777888888888888888775 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 8e-05
    PF05308.6  98 ssvPnlrqeeekaealkkaneeAlqkisaLedELaaLRaQIA 139
                  s + + +++e+k++ + k +ee  +k++a+e+ELa LR Q A
  MMETSP1325-20131115|10568_1  79 SALFEAKMKEKKKKEAAKRAEEKRKKVAAMEEELASLRIQCA 120
                  34445566666777789999999*****************98 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 0.51
    PF05308.6 188 vppppppPpPlpavslqqsasai 210
                  +  p p P P p +   +   a+
  MMETSP1325-20131115|10568_1 223 KRAPGPTPLPGPGPDFDRGQAAT 245
                  22445555555555544444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1626  (0.118929); expected 273.4 (0.02)
Passed bias filter:                      556  (0.0406671); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.95u 0.37s 00:00:01.31 Elapsed: 00:00:00.63
# Mc/sec: 1597.57
//
Query:       MMETSP1325-20131115|10572_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-14   52.9   0.0    2.9e-14   52.7   0.0    1.0  1  PF00069.20 Protein kinase domain
     0.0014   17.7   0.0     0.0016   17.5   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.022   13.7   0.0      0.023   13.6   0.0    1.0  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
      0.033   13.8   0.0      0.035   13.7   0.0    1.2  1  PF01636.18 Phosphotransferase enzyme family
      0.038   13.2   0.0      0.038   13.2   0.0    1.1  1  PF10707.4  PhoP regulatory network protein YrbL


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.0   1.1e-17   2.9e-14      77     136 ..       1      53 [.       1      56 [. 0.90

  Alignments for each domain:
  == domain 1    score: 52.7 bits;  conditional E-value: 1.1e-17
                  EE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT-- CS
   PF00069.20  77 leyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkge 136
                  +e++egg l        +lse  ++ + +q++e++e++Hs+g++HrD+KpeNiL+++  +
  MMETSP1325-20131115|10572_1   1 MELCEGGALT-------RLSESAARLVGRQLFEAIEHCHSHGVVHRDIKPENILFKNAPT 53 
                  6778887777.......89************************************98765 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   5.7e-07    0.0016     102     142 ..      14      54 ..       1      56 [. 0.82

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 5.7e-07
                  HHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEE CS
   PF07714.12 102 lkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvv 142
                   +    +  q+ +++e+ +s+ +vHrd+   N+L ++  +v
  MMETSP1325-20131115|10572_1  14 ESAARLVGRQLFEAIEHCHSHGVVHRDIKPENILFKNAPTV 54 
                  4555667789999*********************9987766 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.4e-06     0.023     118     154 ..      15      51 ..       5      58 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 8.4e-06
    PF06293.9 118 elkralleavGrliakmhragvnHtdlnahnilldee 154
                  +  r + +++ ++i+  h+ gv H+d+ + nil+++ 
  MMETSP1325-20131115|10572_1  15 SAARLVGRQLFEAIEHCHSHGVVHRDIKPENILFKNA 51 
                  45555556667799*******************9975 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.3e-05     0.035     164     184 ..      32      50 ..       2      55 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.3e-05
                  S--EEB-SS-SGGGEEEETTT CS
   PF01636.18 164 eppvllHgDlhpgNllvdpdd 184
                   +++++H+D++p N+l++  +
  MMETSP1325-20131115|10572_1  32 HSHGVVHRDIKPENILFK--N 50 
                  35778************9..3 PP

>> PF10707.4  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.4e-05     0.038     125     153 ..      22      50 ..       8      58 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.4e-05
    PF10707.4 125 eaLeefleallenrIvardlkpknivvgr 153
                  ++L e +e++  +++v rd+kp+ni++++
  MMETSP1325-20131115|10572_1  22 RQLFEAIEHCHSHGVVHRDIKPENILFKN 50 
                  7899999*******************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.45
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|10575_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 489.26
//
Query:       MMETSP1325-20131115|10576_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-17   62.4   0.1    3.1e-17   62.4   0.0    1.0  1  PF03147.9 Ferredoxin-fold anticodon binding domain


Domain annotation for each model (and alignments):
>> PF03147.9  Ferredoxin-fold anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.4   0.0   2.3e-21   3.1e-17      22      94 .]       2      72 .]       1      72 [] 0.97

  Alignments for each domain:
  == domain 1    score: 62.4 bits;  conditional E-value: 2.3e-21
                 -HHHHHHHH----EEEEEEEEEE----S----EEEEEEEEE--SSS---HHHHHHHHHHHHHHHHT-.----- CS
    PF03147.9 22 dildvvreaagellesvelfDvYrgkklaegkkSlalrltlqskektLtdeevnaliekivealeeklgaelR 94
                 d+++++r  ag+l+e++e++D+++++k  +gk S ++r t++s+e++Ltdee+nal++k+++  ++ l++e+R
  MMETSP1325-20131115|10576_1  2 DFFELARGIAGDLVEQIECIDEFTNPK--TGKTSKCYRTTYRSMERSLTDEEINALQNKLRDDAAKLLKVEVR 72
                 678999*********************..9****************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       628  (0.0459333); expected 273.4 (0.02)
Passed bias filter:                      556  (0.0406671); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.48s 00:00:00.79 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|10577_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-05   22.3  19.6    9.7e-05   22.3  13.6    2.8  3  PF07974.8  EGF-like domain
     0.0011   18.7   9.0     0.0011   18.7   6.2    1.9  2  PF00053.19 Laminin EGF-like (Domains III and V)
  ------ inclusion threshold ------
        1.1    9.2  16.6       0.19   11.6   7.6    2.6  3  PF00008.22 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.15   6.9e+02      26      32 .]       4      10 ..       2      10 .. 0.84
   2 ?   -3.2   0.0       1.9   8.6e+03      23      25 ..      15      17 ..      14      19 .. 0.55
   3 !   22.3  13.6   2.1e-08   9.7e-05       1      32 []      49      77 ..      26      77 .. 0.94

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.15
    PF07974.8 26 gyqGktC 32
                  ++G +C
  MMETSP1325-20131115|10577_1  4 EWFGHDC 10
                 59****9 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 1.9
    PF07974.8 23 Cds 25
                 C+ 
  MMETSP1325-20131115|10577_1 15 CPT 17
                 554 PP

  == domain 3    score: 22.3 bits;  conditional E-value: 2.1e-08
    PF07974.8  1 CsadgliCgghGtCvkqcgkCvCdsgyqGktC 32
                 C     +C+++G+C+ ++g+C+C  gy+G++C
  MMETSP1325-20131115|10577_1 49 CHV---DCSNRGQCNYFTGQCKCFTGYYGDNC 77
                 542...4********88*************** PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.4      0.67   3.1e+03      33      33 ..      14      14 ..       3      31 .. 0.60
   2 !   18.7   6.2   2.4e-07    0.0011       3      32 ..      49      78 ..      48      79 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.67
                 E CS
   PF00053.19 33 r 33
                 +
  MMETSP1325-20131115|10577_1 14 H 14
                 2 PP

  == domain 2    score: 18.7 bits;  conditional E-value: 2.4e-07
                 STT-B-CC--B-S----BSBSTTEE---S- CS
   PF00053.19  3 CnphgsssssCdsstgqClCkenveGrkCd 32
                 C+   s++++C+  tgqC+C  ++ G++C 
  MMETSP1325-20131115|10577_1 49 CHVDCSNRGQCNYFTGQCKCFTGYYGDNCG 78
                 777777778********************6 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       0.3   1.4e+03      23      30 ..      14      21 ..      14      23 .. 0.74
   2 ?   -1.4   0.0      0.48   2.2e+03       5       8 ..      30      33 ..      26      41 .. 0.66
   3 ?   11.6   7.6   4.1e-05      0.19       5      32 .]      52      76 ..      44      76 .. 0.89

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.3
                 E--TTCTT CS
   PF00008.22 23 eCpeGytG 30
                 +Cp G + 
  MMETSP1325-20131115|10577_1 14 HCPTGDDP 21
                 69999775 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.48
                 TCSS CS
   PF00008.22  5 pCsn 8 
                 +C n
  MMETSP1325-20131115|10577_1 30 NCFN 33
                 5555 PP

  == domain 3    score: 11.6 bits;  conditional E-value: 4.1e-05
                 TCSS--EEEEECCTEEEEE--TTCTTTE CS
   PF00008.22  5 pCsngGtCvdtpgggytCeCpeGytGkr 32
                  Csn+G+C++      +C+C  Gy G++
  MMETSP1325-20131115|10577_1 52 DCSNRGQCNYFT---GQCKCFTGYYGDN 76
                 7**********6...9*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 415.69
//
Query:       MMETSP1325-20131115|10579_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 281.92
//
Query:       MMETSP1325-20131115|10580_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       176  (0.012873); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 621.10
//
Query:       MMETSP1325-20131115|10581_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.6    7.0   7.1        1.9    6.8   4.9    1.0  1  PF05833.6 Fibronectin-binding protein A N-terminus (FbpA)
        8.9    6.3   8.9      1e+02    2.9   6.3    2.0  1  PF07216.7 LcrG protein


Domain annotation for each model (and alignments):
>> PF05833.6  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   4.9   0.00027       1.9     394     450 ..      15      70 ..      13      74 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00027
    PF05833.6 394 raveaveeqieetkeeleylesveaqlenaesledleeireEleeegylkekkkkkk 450
                  + ++++  ++++tk + ++ ++ e+qle+a++l++l++ r+El++ g+   k+k+k+
  MMETSP1325-20131115|10581_1  15 EMLAEARARLANTKGKKAKRKAREKQLEEAKRLAALQK-RRELKAAGLTGGKRKRKR 70 
                  56788999**********************99999998.889****99998777766 PP

>> PF07216.7  LcrG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   6.3     0.015     1e+02      42      87 ..      29      72 ..       7      74 .. 0.59

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.015
    PF07216.7 42 gellfeaasaelvkaaeqeLlaeikrrresqpqqgeqGkrprrPti 87
                 g++    ++a++ +  e   la +++rre + +  + Gkr+r+  +
  MMETSP1325-20131115|10581_1 29 GKKAK--RKAREKQLEEAKRLAALQKRRELKAAGLTGGKRKRKRNM 72
                 33322..333344444555688888888888888888888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1361  (0.0995465); expected 273.4 (0.02)
Passed bias filter:                      804  (0.0588063); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.43s 00:00:00.84 Elapsed: 00:00:00.56
# Mc/sec: 325.22
//
Query:       MMETSP1325-20131115|10582_1  [L=349]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-19   67.3   0.6    9.6e-08   31.7   0.0    3.4  3  PF13424.1  Tetratricopeptide repeat
      1e-10   41.0  10.9      0.019   14.7   0.0    5.4  5  PF13374.1  Tetratricopeptide repeat
    6.2e-06   25.7   3.6      0.012   15.4   0.0    4.8  6  PF01535.15 PPR repeat
    0.00015   21.3   4.3      0.037   13.8   0.0    4.1  4  PF07719.12 Tetratricopeptide repeat
    0.00017   21.5   0.1       0.37   10.8   0.0    2.5  2  PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
      0.002   18.5  11.9     0.0098   16.3   0.5    4.5  4  PF13428.1  Tetratricopeptide repeat
     0.0031   17.0   0.3      0.048   13.2   0.1    2.6  2  PF13414.1  TPR repeat
     0.0078   15.6   2.0      0.039   13.4   0.0    2.8  4  PF00515.23 Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.027   15.0   9.8       0.36   11.4   0.3    4.6  5  PF13432.1  Tetratricopeptide repeat
      0.031   13.6   0.2      0.031   13.6   0.2    3.7  5  PF12854.2  PPR repeat
      0.033   13.8   0.1       0.17   11.6   0.0    2.3  2  PF13181.1  Tetratricopeptide repeat
      0.038   13.2   0.9      0.073   12.3   0.5    1.4  1  PF14421.1  A distinct subfamily of CDD/CDA-like deaminases
      0.043   13.5   3.2       0.54   10.0   0.1    3.6  4  PF13176.1  Tetratricopeptide repeat
      0.061   13.1   0.2         31    4.5   0.0    3.2  3  PF13041.1  PPR repeat family
        4.1    7.9  10.3         34    5.0   0.0    4.5  4  PF13174.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.4e-07   0.00022      20      69 ..       4      54 ..       1      56 [. 0.91
   2 !   31.7   0.0   1.1e-10   9.6e-08      10      75 ..     106     172 ..      97     175 .. 0.92
   3 !   11.2   0.0   0.00026      0.23       9      42 ..     255     288 ..     247     290 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 2.4e-07
    PF13424.1 20 dydeAlelyekalellr.elgddhpdtaralnnlanlylalgdydeAleyl 69
                 +++eA +l+e+++  ++ +lg +h++t  +   l +++ a+g+ +eA+ ++
  MMETSP1325-20131115|10582_1  4 ELEEAAALLERVVSDRSvVLGSNHLETIESVCMLMRCLIAQGKTEEARHLF 54
                 689************66267****************************987 PP

  == domain 2    score: 31.7 bits;  conditional E-value: 1.1e-10
    PF13424.1  10 nlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75 
                  + ++ +++ g   eA+ ++++++    ++lg dh+dt+r+ + la+++ + g+ deA+e+ ++A+ +
  MMETSP1325-20131115|10582_1 106 EVGERCCETGAVSEAEVMIRHVVRRrSAVLGVDHADTLRSATALADCLGRNGQVDEAIELCREAISA 172
                  67889999*****************88899**********************************976 PP

  == domain 3    score: 11.2 bits;  conditional E-value: 0.00026
    PF13424.1   9 nnlalvlrrlgdydeAlelyekalellrelgddh 42 
                  +  a++l+++g+ +eA++l   + ++++ +gd++
  MMETSP1325-20131115|10582_1 255 DKAAELLEMQGRGEEAEALQASVANIASIFGDAN 288
                  5689***************************975 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00021       0.2      15      40 ..       2      27 ..       1      29 [. 0.94
   2 ?    1.5   0.0      0.29   2.7e+02      12      25 ..      41      54 ..      39      62 .. 0.83
   3 !   14.7   0.0   2.1e-05     0.019       6      42 .]     105     141 ..     100     141 .. 0.90
   4 !   10.0   0.2   0.00063      0.57       1      30 [.     142     171 ..     142     175 .. 0.92
   5 !    6.3   0.2    0.0091       8.3      11      31 ..     260     280 ..     257     283 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00021
    PF13374.1 15 rgryeeAlaleeealairrrllGddH 40
                 ++++eeA al+e++++ r  +lG +H
  MMETSP1325-20131115|10582_1  2 TNELEEAAALLERVVSDRSVVLGSNH 27
                 6899********************** PP

  == domain 2    score: 1.5 bits;  conditional E-value: 0.29
    PF13374.1 12 lrargryeeAlale 25
                 l a+g++eeA+ l+
  MMETSP1325-20131115|10582_1 41 LIAQGKTEEARHLF 54
                 5689*******986 PP

  == domain 3    score: 14.7 bits;  conditional E-value: 2.1e-05
    PF13374.1   6 nnLAlalrargryeeAlaleeealairrrllGddHPd 42 
                    ++ +++++g   eA+ + + ++ +r ++lG dH+d
  MMETSP1325-20131115|10582_1 105 MEVGERCCETGAVSEAEVMIRHVVRRRSAVLGVDHAD 141
                  668899999**************************98 PP

  == domain 4    score: 10.0 bits;  conditional E-value: 0.00063
    PF13374.1   1 taaalnnLAlalrargryeeAlaleeeala 30 
                  t+++++ LA  l + g+ +eA +l +ea +
  MMETSP1325-20131115|10582_1 142 TLRSATALADCLGRNGQVDEAIELCREAIS 171
                  7899***********************965 PP

  == domain 5    score: 6.3 bits;  conditional E-value: 0.0091
    PF13374.1  11 alrargryeeAlaleeealai 31 
                  +l  +gr eeA+al+  ++ i
  MMETSP1325-20131115|10582_1 260 LLEMQGRGEEAEALQASVANI 280
                  56679*********9888765 PP

>> PF01535.15  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       2.4   2.2e+03      15      28 ..       4      17 ..       2      19 .. 0.81
   2 ?    6.1   0.0     0.012        11       5      24 ..      36      55 ..      32      56 .. 0.90
   3 ?   -0.2   0.0       1.2   1.1e+03      10      26 ..     111     127 ..     110     131 .. 0.82
   4 !   15.4   0.0   1.3e-05     0.012       4      25 ..     147     168 ..     144     172 .. 0.89
   5 ?   -0.9   0.1       2.1   1.9e+03      15      26 ..     253     263 ..     249     268 .. 0.69
   6 ?   -2.0   0.1       4.6   4.2e+03      13      22 ..     264     273 ..     261     273 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 2.4
   PF01535.15 15 kleeAlelfkeMke 28
                 +leeA  l+++ ++
  MMETSP1325-20131115|10582_1  4 ELEEAAALLERVVS 17
                 79******998765 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.012
   PF01535.15  5 slIsgyckaGkleeAlelfk 24
                  l++++   Gk eeA  lf+
  MMETSP1325-20131115|10582_1 36 MLMRCLIAQGKTEEARHLFD 55
                 69****************97 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 1.2
   PF01535.15  10 yckaGkleeAlelfkeM 26 
                  +c  G ++eA+ +++  
  MMETSP1325-20131115|10582_1 111 CCETGAVSEAEVMIRHV 127
                  8999******9988765 PP

  == domain 4    score: 15.4 bits;  conditional E-value: 1.3e-05
   PF01535.15   4 nslIsgyckaGkleeAlelfke 25 
                  ++l ++++++G+++eA+el +e
  MMETSP1325-20131115|10582_1 147 TALADCLGRNGQVDEAIELCRE 168
                  8999***************988 PP

  == domain 5    score: -0.9 bits;  conditional E-value: 2.1
   PF01535.15  15 kleeAlelfkeM 26 
                  ++++A el+ eM
  MMETSP1325-20131115|10582_1 253 LVDKAAELL-EM 263
                  688999955.45 PP

  == domain 6    score: -2.0 bits;  conditional E-value: 4.6
   PF01535.15  13 aGkleeAlel 22 
                   G+ eeA+ l
  MMETSP1325-20131115|10582_1 264 QGRGEEAEAL 273
                  5888888865 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.58   5.3e+02      15      28 ..       3      16 ..       1      17 [. 0.85
   2 ?    4.6   0.0     0.036        33      10      24 ..      40      54 ..      39      55 .. 0.90
   3 !   13.8   0.0     4e-05     0.037       6      29 ..     148     171 ..     145     173 .. 0.93
   4 ?   -0.6   0.1       1.6   1.5e+03       8      22 ..     258     272 ..     255     274 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.58
                 T-HHHHHHHHHHHH CS
   PF07719.12 15 gdyeeAleafekAl 28
                 +++eeA++++e+++
  MMETSP1325-20131115|10582_1  3 NELEEAAALLERVV 16
                 689*******9976 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.036
                 HHHHTT-HHHHHHHH CS
   PF07719.12 10 ayyklgdyeeAleaf 24
                 +++++g+ eeA+++f
  MMETSP1325-20131115|10582_1 40 CLIAQGKTEEARHLF 54
                 899*********999 PP

  == domain 3    score: 13.8 bits;  conditional E-value: 4e-05
                  HHHHHHHHTT-HHHHHHHHHHHHH CS
   PF07719.12   6 nlGlayyklgdyeeAleafekAle 29 
                  +l++++ ++g+ +eA+e++++A++
  MMETSP1325-20131115|10582_1 148 ALADCLGRNGQVDEAIELCREAIS 171
                  699*******************96 PP

  == domain 4    score: -0.6 bits;  conditional E-value: 1.6
                  HHHHHHTT-HHHHHH CS
   PF07719.12   8 GlayyklgdyeeAle 22 
                  +++++ +g+ eeA++
  MMETSP1325-20131115|10582_1 258 AELLEMQGRGEEAEA 272
                  778999999999976 PP

>> PF12895.2  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0026       2.4      42      81 ..       6      54 ..       1      68 [. 0.54
   2 !   10.8   0.0    0.0004      0.37      24      51 ..     144     172 ..     114     192 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0026
                 HHHHHHHHC........TSHCH.CBHHHHHHHHHHHHHTT-HHHHCCCH CS
    PF12895.2 42 krAyellrk........lelds.sslgcryllArcllklgkydeAiavL 81
                 ++A  ll++        l  +  +++++  +l rcl+++gk +eA+ ++
  MMETSP1325-20131115|10582_1  6 EEAAALLERvvsdrsvvLGSNHlETIESVCMLMRCLIAQGKTEEARHLF 54
                 4444444444444443311111133455556667777777777776654 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.0004
                  HHHCHHHHHHHHHH---HHHHHHHHHC...T CS
    PF12895.2  24 edaylyalAlclylngeykrAyellrk...l 51 
                   +a +  lA cl +ng+ ++A+el+r+    
  MMETSP1325-20131115|10582_1 144 RSATA--LADCLGRNGQVDEAIELCREaisA 172
                  34445..5*****************875541 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.17   1.6e+02      15      30 ..       3      18 ..       1      20 [. 0.87
   2 ?    3.4   0.0      0.15   1.4e+02       6      36 ..      36      66 ..      34      72 .. 0.83
   3 !   16.3   0.5   1.1e-05    0.0098       5      38 ..     147     182 ..     143     189 .. 0.78
   4 ?   -0.6   0.2       2.9   2.6e+03       5      23 ..     255     273 ..     251     278 .. 0.72

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.17
    PF13428.1 15 GdpdeAiallrralal 30
                 ++++eA+all+r++++
  MMETSP1325-20131115|10582_1  3 NELEEAAALLERVVSD 18
                 689*********9875 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.15
    PF13428.1  6 alarallalGdpdeAiallrralalaPddae 36
                 +l r l+a+G ++eA+ l++  +a++ ++++
  MMETSP1325-20131115|10582_1 36 MLMRCLIAQGKTEEARHLFDVRIAHQANELA 66
                 578999**********999988887776665 PP

  == domain 3    score: 16.3 bits;  conditional E-value: 1.1e-05
    PF13428.1   5 lalarallalGdpdeAiallrralala..Pddaeal 38 
                   ala+ l ++G++deAi+l+r+a+++a    da+a 
  MMETSP1325-20131115|10582_1 147 TALADCLGRNGQVDEAIELCREAISAAvaKADADAA 182
                  689********************9875224556554 PP

  == domain 4    score: -0.6 bits;  conditional E-value: 2.9
    PF13428.1   5 lalarallalGdpdeAial 23 
                   + a++l+ +G+ +eA+al
  MMETSP1325-20131115|10582_1 255 DKAAELLEMQGRGEEAEAL 273
                  4567777778888887775 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.41   3.7e+02      43      61 ..      37      54 ..       2      63 .. 0.63
   2 !   13.2   0.1   5.2e-05     0.048       6      33 ..     146     173 ..     141     191 .. 0.78

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.41
    PF13414.1 43 lAlaylklgkdyeeAledy 61
                 l  +++ +g + eeA++ +
  MMETSP1325-20131115|10582_1 37 LMRCLIAQG-KTEEARHLF 54
                 446888888.478887665 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 5.2e-05
    PF13414.1   6 lkelGnalfkegdydeAieayekAleld 33 
                  + +l+ +l ++g+ deAie++++A++  
  MMETSP1325-20131115|10582_1 146 ATALADCLGRNGQVDEAIELCREAISAA 173
                  5678899999999999999999999864 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       8.8     8e+03      16      27 ..       4      15 ..       3      16 .. 0.76
   2 ?    0.5   0.0      0.51   4.6e+02      10      24 ..      40      54 ..      39      55 .. 0.84
   3 !   13.4   0.0   4.3e-05     0.039       7      29 ..     149     171 ..     147     173 .. 0.93
   4 ?   -3.2   0.1       7.3   6.7e+03      10      21 ..     260     271 ..     258     272 .. 0.78

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 8.8
                 -HHHHHHHHHHH CS
   PF00515.23 16 kydeAleyyekA 27
                 +++eA +  e++
  MMETSP1325-20131115|10582_1  4 ELEEAAALLERV 15
                 789999888875 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.51
                 HHHHTT-HHHHHHHH CS
   PF00515.23 10 aylklgkydeAleyy 24
                 ++  +gk +eA   +
  MMETSP1325-20131115|10582_1 40 CLIAQGKTEEARHLF 54
                 7889*******8776 PP

  == domain 3    score: 13.4 bits;  conditional E-value: 4.3e-05
                  HHHHHHHTT-HHHHHHHHHHHHH CS
   PF00515.23   7 lGnaylklgkydeAleyyekALe 29 
                  l+ ++ ++g+ deA+e +++A++
  MMETSP1325-20131115|10582_1 149 LADCLGRNGQVDEAIELCREAIS 171
                  899******************96 PP

  == domain 4    score: -3.2 bits;  conditional E-value: 7.3
                  HHHHTT-HHHHH CS
   PF00515.23  10 aylklgkydeAl 21 
                  ++  +g+ +eA+
  MMETSP1325-20131115|10582_1 260 LLEMQGRGEEAE 271
                  678899999997 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.32   2.9e+02      12      25 ..       4      17 ..       1      26 [. 0.71
   2 ?    2.4   0.0      0.27   2.4e+02       7      21 ..      41      55 ..      36      69 .. 0.77
   3 ?   11.4   0.3   0.00039      0.36      30      60 ..     142     172 ..     112     182 .. 0.71
   4 ?   -1.1   0.3       3.3     3e+03      48      58 ..     179     189 ..     171     200 .. 0.45
   5 ?    1.4   0.2      0.56   5.1e+02      38      57 ..     258     277 ..     256     289 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.32
    PF13432.1 12 dydeAlaaleaala 25
                 +++eA+a+le+++ 
  MMETSP1325-20131115|10582_1  4 ELEEAAALLERVVS 17
                 56677777777664 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.27
    PF13432.1  7 llraGdydeAlaale 21
                 l+++G+ +eA+++++
  MMETSP1325-20131115|10582_1 41 LIAQGKTEEARHLFD 55
                 567888888888873 PP

  == domain 3    score: 11.4 bits;  conditional E-value: 0.00039
    PF13432.1  30 aaeallllaeallrlgrldeAaallraalal 60 
                    +   +la++l r g++deA++l r+a+++
  MMETSP1325-20131115|10582_1 142 TLRSATALADCLGRNGQVDEAIELCREAISA 172
                  5556668999999999999999999999943 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 3.3
    PF13432.1  48 deAaallraal 58 
                  ++Aa+  + a+
  MMETSP1325-20131115|10582_1 179 ADAAQQVAIAI 189
                  33333333333 PP

  == domain 5    score: 1.4 bits;  conditional E-value: 0.56
    PF13432.1  38 aeallrlgrldeAaallraa 57 
                  ae+l ++gr +eA+al ++ 
  MMETSP1325-20131115|10582_1 258 AELLEMQGRGEEAEALQASV 277
                  88999999999999887665 PP

>> PF12854.2  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       5.2   4.7e+03      22      31 ..       4      13 ..       3      14 .. 0.84
   2 ?   -0.1   0.0      0.67   6.1e+02      21      31 ..      45      55 ..      44      56 .. 0.91
   3 ?   -3.0   0.0       5.4   4.9e+03      18      28 ..     112     122 ..     111     125 .. 0.82
   4 ?   13.6   0.2   3.4e-05     0.031      12      32 ..     148     168 ..     147     170 .. 0.89
   5 ?   -0.3   0.2      0.73   6.7e+02      23      31 ..     254     262 ..     253     263 .. 0.88

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 5.2
    PF12854.2 22 rvdeAvelld 31
                  ++eA  ll+
  MMETSP1325-20131115|10582_1  4 ELEEAAALLE 13
                 699***9998 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.67
    PF12854.2 21 GrvdeAvelld 31
                 G+ +eA  l+d
  MMETSP1325-20131115|10582_1 45 GKTEEARHLFD 55
                 999*******8 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 5.4
    PF12854.2  18 CraGrvdeAve 28 
                  C  G v eA+ 
  MMETSP1325-20131115|10582_1 112 CETGAVSEAEV 122
                  99999999986 PP

  == domain 4    score: 13.6 bits;  conditional E-value: 3.4e-05
    PF12854.2  12 tLIdGlCraGrvdeAvellde 32 
                   L d l r+G vdeA+el +e
  MMETSP1325-20131115|10582_1 148 ALADCLGRNGQVDEAIELCRE 168
                  5779999***********988 PP

  == domain 5    score: -0.3 bits;  conditional E-value: 0.73
    PF12854.2  23 vdeAvelld 31 
                  vd+A ell+
  MMETSP1325-20131115|10582_1 254 VDKAAELLE 262
                  9******98 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         6   5.5e+03      16      28 ..       4      16 ..       2      17 .. 0.77
   2 ?   11.6   0.0   0.00018      0.17       5      30 ..     147     172 ..     143     173 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 6
                 -HHHHHHHHH--- CS
    PF13181.1 16 dydkAkeylekal 28
                 + ++A + le+++
  MMETSP1325-20131115|10582_1  4 ELEEAAALLERVV 16
                 6789999999887 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00018
                  TT---HHHHTT-HHHHHHHHH---HH CS
    PF13181.1   5 ynlGdiYrqlGdydkAkeylekalel 30 
                  ++l+d++  +G+ d+A+e  ++a++ 
  MMETSP1325-20131115|10582_1 147 TALADCLGRNGQVDEAIELCREAISA 172
                  689********************985 PP

>> PF14421.1  A distinct subfamily of CDD/CDA-like deaminases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.5     8e-05     0.073      52     112 ..      87     145 ..      74     184 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 8e-05
    PF14421.1  52 ldgdgreelvrgvNlEvSmPtGSlCsErnaigkalasdpslrRrdlkaiAvlsvastaag.s 112
                  + +dg+++  +++ lE+ m  G +C E  a+++a      + Rr     Avl+v+ + +  s
  MMETSP1325-20131115|10582_1  87 RPKDGKRDGLEATTLELIMEVGERCCETGAVSEAEVMIRHVVRR---RSAVLGVDHADTLrS 145
                  33478888*************************76665555554...469999955544422 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.53   4.8e+02      13      27 ..       3      15 ..       2      21 .. 0.84
   2 ?   -1.6   0.0       3.2   2.9e+03      11      22 ..      43      54 ..      37      60 .. 0.80
   3 ?   10.0   0.1    0.0006      0.54       4      27 ..     148     171 ..     146     182 .. 0.80
   4 ?   -1.7   0.0       3.3     3e+03      16      24 ..     255     263 ..     254     273 .. 0.71

  Alignments for each domain:
  == domain 1    score: 0.8 bits;  conditional E-value: 0.53
    PF13176.1 13 gdyekAielyeraLa 27
                 ++ e+A+ l+er  +
  MMETSP1325-20131115|10582_1  3 NELEEAAALLER--V 15
                 6789*******9..5 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 3.2
    PF13176.1 11 rlgdyekAiely 22
                 ++g++e+A  l+
  MMETSP1325-20131115|10582_1 43 AQGKTEEARHLF 54
                 6999**997665 PP

  == domain 3    score: 10.0 bits;  conditional E-value: 0.0006
    PF13176.1   4 nLarlysrlgdyekAielyeraLa 27 
                  +La++  r g+ ++Aiel+++a+ 
  MMETSP1325-20131115|10582_1 148 ALADCLGRNGQVDEAIELCREAIS 171
                  79*******************553 PP

  == domain 4    score: -1.7 bits;  conditional E-value: 3.3
    PF13176.1  16 ekAielyer 24 
                  +kA+el+e 
  MMETSP1325-20131115|10582_1 255 DKAAELLEM 263
                  788888875 PP

>> PF13041.1  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.042        39       8      27 ..      36      55 ..      33      61 .. 0.90
   2 ?   -0.4   0.0       1.2   1.1e+03      12      26 ..     110     124 ..     109     132 .. 0.78
   3 ?    4.5   0.0     0.033        31      11      28 ..     151     168 ..     145     174 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.042
    PF13041.1  8 tlIsglckkgkveeAfklfn 27
                 +l+++l  +gk eeA  lf+
  MMETSP1325-20131115|10582_1 36 MLMRCLIAQGKTEEARHLFD 55
                 799****************8 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 1.2
    PF13041.1  12 glckkgkveeAfklf 26 
                   +c+ g v+eA+ + 
  MMETSP1325-20131115|10582_1 110 RCCETGAVSEAEVMI 124
                  58*********8766 PP

  == domain 3    score: 4.5 bits;  conditional E-value: 0.033
    PF13041.1  11 sglckkgkveeAfklfne 28 
                  ++l ++g+v+eA++l +e
  MMETSP1325-20131115|10582_1 151 DCLGRNGQVDEAIELCRE 168
                  67899*********9765 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.51   4.6e+02      15      28 ..       4      17 ..       2      19 .. 0.85
   2 ?    4.6   0.0      0.05        45       6      23 ..      37      54 ..      36      56 .. 0.87
   3 ?    5.0   0.0     0.037        34       6      28 ..     149     171 ..     148     173 .. 0.88
   4 ?   -0.5   0.2       2.1   1.9e+03       5      20 ..     256     271 ..     255     275 .. 0.64

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.51
                 HHHHHHHHHHHHHH CS
    PF13174.1 15 dtdeAlealerlik 28
                 + +eA ++ler+++
  MMETSP1325-20131115|10582_1  4 ELEEAAALLERVVS 17
                 679*********97 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.05
                 HHHHHHHHHHHHHHHHHH CS
    PF13174.1  6 lalsyyklgdtdeAleal 23
                 l ++++++g+t+eA+ ++
  MMETSP1325-20131115|10582_1 37 LMRCLIAQGKTEEARHLF 54
                 899***********9777 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.037
                  HHHHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1   6 lalsyyklgdtdeAlealerlik 28 
                  la ++ ++g+ deA+e+ ++ i+
  MMETSP1325-20131115|10582_1 149 LADCLGRNGQVDEAIELCREAIS 171
                  79999**99*******9998875 PP

  == domain 4    score: -0.5 bits;  conditional E-value: 2.1
                  HHHHHHHHHHHHHHHH CS
    PF13174.1   5 klalsyyklgdtdeAl 20 
                  k+a++++++g+ +eA 
  MMETSP1325-20131115|10582_1 256 KAAELLEMQGRGEEAE 271
                  6788889875555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.66u 0.36s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 1639.86
//
Query:       MMETSP1325-20131115|10578_1  [L=690]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-22   79.3   0.0    1.6e-09   37.6   0.0    3.2  2  PF09414.5  RNA ligase
     0.0034   17.6   7.4     0.0034   17.6   5.1    2.9  4  PF00428.14 60s Acidic ribosomal protein
     0.0099   16.4   8.7     0.0099   16.4   6.0    2.9  3  PF10471.4  Anaphase-promoting complex APC subunit 1
  ------ inclusion threshold ------
      0.024   12.7   2.7      0.041   11.9   1.9    1.3  1  PF11336.3  Protein of unknown function (DUF3138)
       0.13   11.4   0.0        2.8    7.1   0.0    2.4  2  PF01068.16 ATP dependent DNA ligase domain


Domain annotation for each model (and alignments):
>> PF09414.5  RNA ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0     6e-13   1.6e-09       1     176 [.     125     350 ..     125     360 .. 0.73
   2 !   36.0   0.0   1.9e-12   5.2e-09       2     173 ..     492     651 ..     491     666 .. 0.79

  Alignments for each domain:
  == domain 1    score: 37.6 bits;  conditional E-value: 6e-13
    PF09414.5   1 rewvateKlhGtnisvyiveeeravrvakrsgeidpaedFfgyevlqnhyaasiealqallklallvsalipetvivyGElfG..pgvqknty...........................nlgpekdfyvFdiavineqeel...rflsddaveefcktlgLktvpvLgrgtfdelkalsvenev.................................lksslkknvaEGvVlkpvke.eng 176
                  +e+v+teKl+G n+++++ +      +a++ +  + +  F+  + l++++ +   a++++l +         ++v+++GE+++  +++q++                             n++ +++  +   ++++e       r+ls+ +v+ ++++l ++tvpvL  gt++  +al+++  +                                 + ++ + +  EG+V+++  + ++g
  MMETSP1325-20131115|10578_1 125 QEVVITEKLDGGNCCLAWGQV-----FARTHAHEASHASFSAIKALSAQLRRDKSAVFEVLDE---------RRVMLFGENMAavHSIQYDGIgsffylfgalclgraqdietepttpatNATATATATATATVMMGEPAARvraRWLSWSEVASIAEALEIPTVPVLFHGTLT--QALPPSSSSsssssspspspatqleamlarfsaspsaladphARPEPERTRPEGFVVRHSASyFDG 350
                  69***************9322.....4444444456667777777777777776666666664.........58********999555555445666677777777766666666666553434555555555555444433468*****************************..55555544556******************************96677777889*******9875533 PP

  == domain 2    score: 36.0 bits;  conditional E-value: 1.9e-12
    PF09414.5   2 ewvateKlhGtnisvyiveeeravrvakrsgeidpaedFfgyevlqnhyaasiealqallklallvsalipetvivyGElfGpgvqkntynlgpekdfyvFdiavineqeelrflsddave.efcktlgLktvpvLgrgtfdelkalsvenev...lksslkknvaEGvVlkpvke 173
                  ++v+ eK++G+n+++ i +++  + +  rs         f +    ++++a + + ++ +   +++s l+p++ i+yGE ++++ +   y+ ++ ++f++Fd   + e    rf s+ a++ +++++  +++vp +++g+++  + l++  ++     +s++++  EGv l+ ++e
  MMETSP1325-20131115|10578_1 492 DVVIEEKVDGANLGISIGKADYRLYYQNRSH--------FVCATSASQWKALAAWERQHSH--EIHSLLEPGRHILYGEWLAHQ-HSLDYD-RLPAYFVAFDCYDRREG---RFWSRSALRaALAEHTTIPMVPSIYKGPVGGPDQLRALLNTssaF-RSGDGKYVEGVYLRIDDE 651
                  69**************988887788888888........8888888999888777655544..4567789***********644.444442.3579********99666...88888777616789999************9888888887778854.78889999***9998876 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.3         5   1.4e+04      49      62 ..      37      50 ..      21      56 .. 0.48
   2 ?   -1.6   0.7       1.2   3.2e+03      48      57 ..     232     241 ..     214     253 .. 0.51
   3 ?   -3.3   0.2         4   1.1e+04      47      66 ..     312     331 ..     292     336 .. 0.62
   4 !   17.6   5.1   1.2e-06    0.0034      48      84 ..     415     449 ..     374     452 .. 0.59

  Alignments for each domain:
  == domain 1    score: -4.0 bits;  conditional E-value: 5
   PF00428.14 49 aaaaaaaaaaaaaa 62
                 +++ + +a+ ++aa
  MMETSP1325-20131115|10578_1 37 SPPPPSSAPRPSAA 50
                 33333333333333 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 1.2
   PF00428.14  48 aaaaaaaaaa 57 
                  a a a+a+a 
  MMETSP1325-20131115|10578_1 232 ATATATATAT 241
                  2222222222 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 4
   PF00428.14  47 aaaaaaaaaaaaaaaaaaaa 66 
                   a  +a+ +a a + a ++ 
  MMETSP1325-20131115|10578_1 312 LARFSASPSALADPHARPEP 331
                  34455555555555555554 PP

  == domain 4    score: 17.6 bits;  conditional E-value: 1.2e-06
   PF00428.14  48 aaaaaaaaaaaaaaaaaaaeeekkeeeeeEeedddmG 84 
                  +++++a aa +aaaaaaaae++++eee e e   d G
  MMETSP1325-20131115|10578_1 415 SSSSSAGAARGAAAAAAAAEAAAAEEEGE-EGQ-DDG 449
                  34445555555555555555555555552.333.333 PP

>> PF10471.4  Anaphase-promoting complex APC subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   1.0      0.85   2.3e+03      40      63 ..      58      81 ..      22      95 .. 0.60
   2 ?   -3.8   0.1         5   1.4e+04      52      60 ..     293     301 ..     285     314 .. 0.48
   3 !   16.4   6.0   3.6e-06    0.0099      10      52 ..     379     426 ..     377     449 .. 0.73

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.85
                 ................-------- CS
    PF10471.4 40 eassssdesqtssstdspndeskp 63
                 ++++ ++  + +++++++++++++
  MMETSP1325-20131115|10578_1 58 KSHQPNTSNAKAAKGTQHTTLNTS 81
                 223333334444444444444433 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 5
                  ....----- CS
    PF10471.4  52 sstdspnde 60 
                  ss++s++++
  MMETSP1325-20131115|10578_1 293 SSSSSSSPS 301
                  222222222 PP

  == domain 3    score: 16.4 bits;  conditional E-value: 3.6e-06
                  ---HHHHHHHCTT----------------................... CS
    PF10471.4  10 eLtaeDieeyederkeqklqqeqkaqqks.....eeassssdesqtss 52 
                  +L ++ +e++++ r++q++qq+q++qq++     +++ssss  ++ ++
  MMETSP1325-20131115|10578_1 379 TLNPDAVEALQQQRQRQRQQQQQQQQQRQrqawgPKSSSSSAGAARGA 426
                  699999***********************7887744444433333333 PP

>> PF11336.3  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.9   1.5e-05     0.041      25     116 ..     383     508 ..     373     533 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.5e-05
    PF11336.3  25 eqikalqaqlaal.....qqqvkelraalaakpaaagggakiqsaaaaaaaapaad.............................aaaalteddvtelkeqvanaelkvdsltdaattGpiaGlsv 116
                  + ++alq+q +       qqq +  r+a   k+++++ ga  ++aaaaaaa  aa                                 a+t+dd+    + va     vd + +   +G   G+s+
  MMETSP1325-20131115|10578_1 383 DAVEALQQQRQRQrqqqqQQQQQRQRQAWGPKSSSSSAGAARGAAAAAAAAEAAAAeeegeegqddggsvqpvakfprtphifdaGGGAVTRDDLLLGADDVARFYSGVDVVIEEKVDGANLGISI 508
                  455666655443300000222333333444555555556655555555444333323566677777777777777777777776555667777777777777777777777777777777777776 PP

>> PF01068.16  ATP dependent DNA ligase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.053   1.5e+02      12      53 ..     117     157 ..     109     200 .. 0.61
   2 ?    7.1   0.0     0.001       2.8      19      71 ..     491     547 ..     481     594 .. 0.70

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.053
                  HHHHHT.TSSEEEE--B---EEEEEEEEESEEEEETTSSB-CC CS
   PF01068.16  12 kalkkl.egafiveeKyDGeRvqvhkdgdevkllSRrgkdita 53 
                  + l+ + ++++++ eK+DG + ++   +++v + +   +   a
  MMETSP1325-20131115|10578_1 117 SSLEPFlSQEVVITEKLDGGNCCLA--WGQVFARTHAHEASHA 157
                  556666789999********98877..6666555544444444 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.001
                  SSEEEE--B---E..EEEEEEEESEEEEETTSSB-CC..HHHHHHHHCHHHHCCC-T CS
   PF01068.16  19 gafiveeKyDGeR..vqvhkdgdevkllSRrgkdita..kkpellkalkeaflkdvk 71 
                   ++++eeK+DG++  + + k + + ++  R+   +     +++ l+a +++  ++++
  MMETSP1325-20131115|10578_1 491 VDVVIEEKVDGANlgISIGKADYRLYYQNRSHFVCATsaSQWKALAAWERQHSHEIH 547
                  5789*********77777788888888899988887756555555555555444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (690 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1337  (0.0977911); expected 273.4 (0.02)
Passed bias filter:                      490  (0.0358397); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.37u 0.38s 00:00:01.75 Elapsed: 00:00:00.74
# Mc/sec: 2234.44
//
Query:       MMETSP1325-20131115|10583_1  [L=386]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       497  (0.0363517); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1813.71
//
Query:       MMETSP1325-20131115|10586_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.023   14.2   0.4      0.024   14.1   0.2    1.0  1  PF11076.3 Putative inner membrane protein YbhQ
       0.05   12.6   1.2      0.056   12.4   0.8    1.0  1  PF07907.6 YibE/F-like protein


Domain annotation for each model (and alignments):
>> PF11076.3  Putative inner membrane protein YbhQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.2   3.6e-06     0.024      13      70 ..       3      60 ..       1      63 [. 0.88

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3.6e-06
    PF11076.3 13 lscwqimlhllvvallvvgwmsgalvkvglglcalyavtvvlmlvlqrhhearwrevg 70
                 ++cwqi+l  l + ll      g+      +l +l  v++++ ++++ + + + r v+
  MMETSP1325-20131115|10586_1  3 VACWQILLFALYLLLLDAAMTKGTQAAFISSLLMLANVSLIATIFIETKAQRKRRMVT 60
                 68*******9999999999889999999999************999999888888775 PP

>> PF07907.6  YibE/F-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.8   8.2e-06     0.056      56     100 ..       6      50 ..       2      59 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.2e-06
    PF07907.6  56 ilaililivtlllvsgfnkktlaallgtllgvllalllallvikl 100
                    ++l+++  lll + ++k t aa++++ll ++ + l+a+++i++
  MMETSP1325-20131115|10586_1   6 WQILLFALYLLLLDAAMTKGTQAAFISSLLMLANVSLIATIFIET 50 
                  55678888888899999************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       711  (0.0520041); expected 273.4 (0.02)
Passed bias filter:                      512  (0.0374488); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 312.99
//
Query:       MMETSP1325-20131115|10585_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 1308.01
//
Query:       MMETSP1325-20131115|10589_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-15   56.1   2.8    1.2e-11   44.0   0.5    2.0  2  PF00153.22 Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> PF00153.22  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   6.4e-06     0.087      63      94 ..       1      31 [.       1      33 [. 0.90
   2 !   44.0   0.5   8.6e-16   1.2e-11       3      85 ..      46     131 ..      44     134 .. 0.94

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 6.4e-06
                 GG---HHHHHHHHHHHHHHHHHHHHHHHHH-G CS
   PF00153.22 63 lyrGllpnllrvvpaaaikfvtyetlkkllsk 94
                 l+ G++++l+  v++  i+f++yetlk l +k
  MMETSP1325-20131115|10589_1  1 LWAGTGASLF-LVSNPIIQFSVYETLKALRMK 31
                 89********.69**************98665 PP

  == domain 2    score: 44.0 bits;  conditional E-value: 8.6e-16
                  HHHHHHHH----HHHCCHHHCHHHHHHHHHHH...-SS--GCGS----HHHHHHHHHH---GGGG---HHHHHHHHHHHHHHHHHH CS
   PF00153.22   3 lsvlksllaGaiAgaiaalvttPldvvKtrlq...ksaasasskykgildalkkiykeeGirglyrGllpnllrvvpaaaikfvty 85 
                  ls+++ ++ Ga+A+aia+++t+P+ v+  +l     ++++++s+   +ld++  ++ + G+++ + G+ ++l ++v++aa+ f++y
  MMETSP1325-20131115|10589_1  46 LSTAEGFMFGALAKAIATFATYPVQVAQSKLRaegGTRKGGQSESAATLDCILAMWAKGGMKECFAGIEAKLAQTVLTAAFVFAIY 131
                  5778899*************************9998888999999***************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 772.16
//
Query:       MMETSP1325-20131115|10590_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 212.51
//
Query:       MMETSP1325-20131115|10591_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 1125.84
//
Query:       MMETSP1325-20131115|10592_1  [L=148]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-22   79.1  10.7    3.6e-08   32.9   0.9    2.9  3  PF13855.1  Leucine rich repeat
    1.6e-16   59.3  14.4      4e-06   26.1   0.1    4.3  5  PF12799.2  Leucine Rich repeats (2 copies)
    4.5e-16   56.2   0.7      0.002   17.7   0.0    5.4  5  PF00560.28 Leucine Rich Repeat
    1.4e-10   39.4   4.8       0.52   10.6   0.0    5.4  5  PF13504.1  Leucine rich repeat
     0.0001   21.8   0.7         26    5.2   0.0    4.9  5  PF13516.1  Leucine Rich repeat
  ------ inclusion threshold ------
       0.09   11.8   0.0       0.13   11.2   0.0    1.4  1  PF01081.14 KDPG and KHG aldolase


Domain annotation for each model (and alignments):
>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.2   1.6e-11   3.7e-08       2      61 .]       3      61 ..       2      61 .. 0.96
   2 !   32.9   0.9   1.6e-11   3.6e-08       2      59 ..      27      83 ..      26      86 .. 0.96
   3 !   31.0   0.1   5.9e-11   1.3e-07       2      56 ..      74     128 ..      73     129 .. 0.89

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 1.6e-11
    PF13855.1  2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                 +L+ L+L +N lk+ p ++F+  + Lk L L +n+l+si+pe+  +L++ +  ++sgN+l
  MMETSP1325-20131115|10592_1  3 QLTALHLGHNALKEFPAEIFETVTGLKQLHLFRNKLESIPPEV-GNLTNCKRMSFSGNNL 61
                 89***************************************99.9999999999999997 PP

  == domain 2    score: 32.9 bits;  conditional E-value: 1.6e-11
    PF13855.1  2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                  Lk L+L +N+l++ip+++ ++l+n k +++sgnnl++ s +++++++ L+eL+LsgN
  MMETSP1325-20131115|10592_1 27 GLKQLHLFRNKLESIPPEV-GNLTNCKRMSFSGNNLTVDSLQTIHQCEGLEELYLSGN 83
                 79****************9.88***********************************9 PP

  == domain 3    score: 31.0 bits;  conditional E-value: 5.9e-11
    PF13855.1   2 nLkeLdLsnN.rlkvipdgaFkglsnLkvLdLsgnnl.ksispeafkgLpsLreLnL 56 
                   L+eL+Ls+N +lk++p ++F++l  L++L++ ++++ ks+++ ++ +++ Lre+++
  MMETSP1325-20131115|10592_1  74 GLEELYLSGNaKLKSVP-ESFGKLRMLQELSIRNCKTlKSVPA-SLTDCELLREVDV 128
                  79**************9.6**************7777477765.99*******9986 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.4e-07   0.00032       1      40 [.       2      42 ..       2      42 .. 0.92
   2 !   17.3   0.6   1.1e-06    0.0024       1      25 [.      26      50 ..      26      69 .. 0.90
   3 !   15.4   0.1   4.1e-06    0.0094       2      39 ..      50      89 ..      49      91 .. 0.84
   4 !   26.1   0.1   1.8e-09     4e-06       2      39 ..      74     113 ..      73     117 .. 0.89
   5 !   11.1   0.0   9.3e-05      0.21       3      31 ..      99     128 ..      97     129 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.4e-07
    PF12799.2  1 tnLevLdLsnNnIkdlppel.anLpnLktLnLsnNpisdls 40
                 t+L+ L L +N +k+ p+e+    + Lk+L+L +N++++++
  MMETSP1325-20131115|10592_1  2 TQLTALHLGHNALKEFPAEIfETVTGLKQLHLFRNKLESIP 42
                 6899**************963789**************985 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 1.1e-06
    PF12799.2  1 tnLevLdLsnNnIkdlppelanLpn 25
                 t L+ L L +N+++++ppe++nL+n
  MMETSP1325-20131115|10592_1 26 TGLKQLHLFRNKLESIPPEVGNLTN 50
                 579********************98 PP

  == domain 3    score: 15.4 bits;  conditional E-value: 4.1e-06
    PF12799.2  2 nLevLdLsnNnIk..dlppelanLpnLktLnLsnN.pisdl 39
                 n +  ++s+Nn++  +l   + ++  L++L+Ls+N ++ ++
  MMETSP1325-20131115|10592_1 50 NCKRMSFSGNNLTvdSLQT-IHQCEGLEELYLSGNaKLKSV 89
                 6677799*****9867998.***************677765 PP

  == domain 4    score: 26.1 bits;  conditional E-value: 1.8e-09
    PF12799.2   2 nLevLdLsnN.nIkdlppelanLpnLktLnLsnNp.isdl 39 
                   Le+L+Ls+N ++k++p+++++L+ L++L++ n++ + ++
  MMETSP1325-20131115|10592_1  74 GLEELYLSGNaKLKSVPESFGKLRMLQELSIRNCKtLKSV 113
                  69********78**********************856665 PP

  == domain 5    score: 11.1 bits;  conditional E-value: 9.3e-05
    PF12799.2   3 LevLdLsnNn.IkdlppelanLpnLktLnL 31 
                  L++L+++n++ +k++p++l  +  L++ ++
  MMETSP1325-20131115|10592_1  99 LQELSIRNCKtLKSVPASLTDCELLREVDV 128
                  9********88********99999998876 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0014       3.2       1      20 [.       3      23 ..       3      25 .. 0.90
   2 !   10.2   0.0   0.00025      0.58       2      22 .]      28      48 ..      27      48 .. 0.92
   3 !    5.6   0.1    0.0088        20       3      17 ..      52      71 ..      50      75 .. 0.70
   4 !   17.7   0.0   8.7e-07     0.002       2      22 .]      75      96 ..      74      96 .. 0.95
   5 !    9.3   0.0    0.0005       1.1       2      20 ..      99     118 ..      98     120 .. 0.89

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0014
                 TESEEEETSSBCBCHHHH.HH CS
   PF00560.28  1 nLeeLdLsgNnltslpps.ls 20
                 +L+ L+L +N l+++p + ++
  MMETSP1325-20131115|10592_1  3 QLTALHLGHNALKEFPAEiFE 23
                 5999************99886 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00025
                 ESEEEETSSBCBCHHHHHHHH CS
   PF00560.28  2 LeeLdLsgNnltslppslsnL 22
                 L+ L+L +N+l+s+pp+ +nL
  MMETSP1325-20131115|10592_1 28 LKQLHLFRNKLESIPPEVGNL 48
                 899*************98887 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.0088
                 SEEEETSSBCB.C....HHH CS
   PF00560.28  3 eeLdLsgNnlt.s....lpp 17
                 ++ ++sgNnlt +    ++ 
  MMETSP1325-20131115|10592_1 52 KRMSFSGNNLTvDslqtIHQ 71
                 67899******447655555 PP

  == domain 4    score: 17.7 bits;  conditional E-value: 8.7e-07
                 ESEEEETSS.BCBCHHHHHHHH CS
   PF00560.28  2 LeeLdLsgN.nltslppslsnL 22
                 LeeL+LsgN +l+s+p+s+++L
  MMETSP1325-20131115|10592_1 75 LEELYLSGNaKLKSVPESFGKL 96
                 9******************987 PP

  == domain 5    score: 9.3 bits;  conditional E-value: 0.0005
                  ESEEEETSS.BCBCHHHHHH CS
   PF00560.28   2 LeeLdLsgN.nltslppsls 20 
                  L+eL+++++  l+s+p sl 
  MMETSP1325-20131115|10592_1  99 LQELSIRNCkTLKSVPASLT 118
                  9**************99875 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0015       3.4       1      17 []       2      18 ..       2      18 .. 0.93
   2 !   10.6   0.0   0.00023      0.52       2      17 .]      27      42 ..      26      42 .. 0.93
   3 ?    0.8   0.1      0.39   8.9e+02       4      14 ..      52      62 ..      46      68 .. 0.68
   4 !    8.7   0.0   0.00097       2.2       3      17 .]      75      90 ..      74      90 .. 0.90
   5 !    8.5   0.0    0.0011       2.6       3      17 .]      99     114 ..      97     114 .. 0.92

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0015
    PF13504.1  1 pnLkeLdLsgnrLtsLP 17
                 ++L+ L+L +n L+++P
  MMETSP1325-20131115|10592_1  2 TQLTALHLGHNALKEFP 18
                 68************998 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 0.00023
    PF13504.1  2 nLkeLdLsgnrLtsLP 17
                  Lk+L+L +n+L+s+P
  MMETSP1325-20131115|10592_1 27 GLKQLHLFRNKLESIP 42
                 69************99 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.39
    PF13504.1  4 keLdLsgnrLt 14
                 k+ + sgn+Lt
  MMETSP1325-20131115|10592_1 52 KRMSFSGNNLT 62
                 44567899987 PP

  == domain 4    score: 8.7 bits;  conditional E-value: 0.00097
    PF13504.1  3 LkeLdLsgnr.LtsLP 17
                 L+eL+Lsgn  L+s+P
  MMETSP1325-20131115|10592_1 75 LEELYLSGNAkLKSVP 90
                 99*******8799987 PP

  == domain 5    score: 8.5 bits;  conditional E-value: 0.0011
    PF13504.1   3 LkeLdLsgnr.LtsLP 17 
                  L+eL++++++ L+s+P
  MMETSP1325-20131115|10592_1  99 LQELSIRNCKtLKSVP 114
                  9*********9*9988 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.011        26       2      14 ..       2      14 ..       1      20 [. 0.87
   2 ?    0.3   0.0      0.41   9.4e+02       4      16 ..      28      40 ..      26      44 .. 0.84
   3 ?    3.0   0.1     0.054   1.2e+02       8      22 ..      55      69 ..      46      71 .. 0.74
   4 ?    5.1   0.0     0.012        28       1      13 [.      72      84 ..      72      94 .. 0.84
   5 ?    1.6   0.0      0.16   3.5e+02       4      13 ..      99     108 ..      96     119 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.011
    PF13516.1  2 knLtsLdLsnNqi 14
                 ++Lt L+L++N +
  MMETSP1325-20131115|10592_1  2 TQLTALHLGHNAL 14
                 79*********87 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.41
    PF13516.1  4 LtsLdLsnNqigd 16
                 L+ L+L +N++ +
  MMETSP1325-20131115|10592_1 28 LKQLHLFRNKLES 40
                 8899999999865 PP

  == domain 3    score: 3.0 bits;  conditional E-value: 0.054
    PF13516.1  8 dLsnNqigdeGlsaL 22
                  +s+N+++ + l+ +
  MMETSP1325-20131115|10592_1 55 SFSGNNLTVDSLQTI 69
                 689*****9998876 PP

  == domain 4    score: 5.1 bits;  conditional E-value: 0.012
    PF13516.1  1 lknLtsLdLsnNq 13
                 +  L++L Ls+N 
  MMETSP1325-20131115|10592_1 72 CEGLEELYLSGNA 84
                 5569*******95 PP

  == domain 5    score: 1.6 bits;  conditional E-value: 0.16
    PF13516.1   4 LtsLdLsnNq 13 
                  L++L + n++
  MMETSP1325-20131115|10592_1  99 LQELSIRNCK 108
                  8999999997 PP

>> PF01081.14  KDPG and KHG aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.8e-05      0.13     116     152 ..       5      41 ..       1      73 [. 0.83

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.8e-05
                  HHHH----EEEETTTTT----HHHHHH----TT-EEE CS
   PF01081.14 116 laldlGlkrlklFPaeasGGvkalkalagpfaqvrfi 152
                   al+lG ++lk FPae++  v  lk+l    ++++ i
  MMETSP1325-20131115|10592_1   5 TALHLGHNALKEFPAEIFETVTGLKQLHLFRNKLESI 41 
                  699*******************999987655555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 709.32
//
Query:       MMETSP1325-20131115|10595_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-10   38.2   0.1      1e-09   37.8   0.1    1.2  1  PF02209.14 Villin headpiece domain
  ------ inclusion threshold ------
      0.012   15.4   0.0      0.017   15.0   0.0    1.2  1  PF09286.6  Pro-kumamolisin, activation domain


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.1   1.5e-13     1e-09       1      35 [.     118     152 ..     118     152 .. 0.95

  Alignments for each domain:
  == domain 1    score: 37.8 bits;  conditional E-value: 1.5e-13
                  GS-HHHHHHHTSS-HHHHTTS-HHHHHHHHHHCT- CS
   PF02209.14   1 YLsdedFeevFgMtkeeFykLPaWKqnqlKkklgL 35 
                  +Lsd +F+evFgM k++F k + W q  +K  ++L
  MMETSP1325-20131115|10595_1 118 HLSDAEFQEVFGMKKSAFSKVADWMQASMKEGVNL 152
                  9*****************************87766 PP

>> PF09286.6  Pro-kumamolisin, activation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   2.4e-06     0.017      44      74 ..     108     145 ..      76     149 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.4e-06
    PF09286.6  44 y.......gkhltaeevaelfapseetidaVrawLess 74 
                           +hl+ +e++e f+ +++++ +V +w+++s
  MMETSP1325-20131115|10595_1 108 AdvdpahkERHLSDAEFQEVFGMKKSAFSKVADWMQAS 145
                  0444444499*************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 718.91
//
Query:       MMETSP1325-20131115|10596_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-16   57.8   0.1    6.7e-16   57.7   0.0    1.0  1  PF02887.11 Pyruvate kinase, alpha/beta domain


Domain annotation for each model (and alignments):
>> PF02887.11  Pyruvate kinase, alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.0   4.9e-20   6.7e-16      15      76 ..       1      61 [.       1      72 [] 0.87

  Alignments for each domain:
  == domain 1    score: 57.7 bits;  conditional E-value: 4.9e-20
                 HT-SEEEEE-----HHHHHHHT--SSEEEEEES-HHHHH--TEEE--ETTE-SHHCHCHHHH CS
   PF02887.11 15 lgakaIvvltesGstarlvskyrpgvpIlavtpseetarqlalvwGvhplvgkeraistdev 76
                 lgak+I+v t  Gs arl++k+rp+vp++a+++ +++arql++++Gv+p+vg+e +    + 
  MMETSP1325-20131115|10596_1  1 LGAKCIIVSTAAGSKARLIAKHRPNVPVVAICTVPKVARQLNIHRGVQPYVGPEIR-GLAQR 61
                 79***********************************************9999988.53333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.60
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|10598_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00074   18.7   2.6    0.00074   18.7   1.8    2.0  2  PF02809.15 Ubiquitin interaction motif
  ------ inclusion threshold ------
      0.074   12.4   1.4      0.093   12.1   0.9    1.1  1  PF12230.3  Pre-mRNA splicing factor PRP21 like protein


Domain annotation for each model (and alignments):
>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.69   4.7e+03      12      16 ..      26      30 ..      26      30 .. 0.78
   2 !   18.7   1.8   1.1e-07   0.00074       2      18 .]      94     110 ..      93     110 .. 0.94

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.69
                 HHHHH CS
   PF02809.15 12 alSle 16
                 +lS++
  MMETSP1325-20131115|10598_1 26 ELSMA 30
                 69995 PP

  == domain 2    score: 18.7 bits;  conditional E-value: 1.1e-07
                  CCHHHHHHHHHHHHHHH CS
   PF02809.15   2 sEEedLqlALalSleea 18 
                  s+E+ L +A+++S+++a
  MMETSP1325-20131115|10598_1  94 SDEDALEQAIRMSMQDA 110
                  8**************96 PP

>> PF12230.3  Pre-mRNA splicing factor PRP21 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.9   1.4e-05     0.093      60     124 ..      30     105 ..      27     111 .. 0.63

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.4e-05
    PF12230.3  60 vvVetieFndddvkeLpkPltleelkarsleqkskaleeeeeaaaeeeeeeeeee..............edeeeekkee 124
                  + Ve ie nd d  +LpkP  ++  k+   +  s+a e+e   ++++  e+                  ed  e+  ++
  MMETSP1325-20131115|10598_1  30 ALVEFIEQNDLDATTLPKPKHRARTKTDEYDVTSRADEVEVDSDNDHVMED---DmgspnpaanshvsdEDALEQAIRM 105
                  689****************98888888877766666555555553332222...1233566555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 497.02
//
Query:       MMETSP1325-20131115|10599_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-05   22.5   0.0    0.00014   21.5   0.0    1.6  1  PF00173.23 Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> PF00173.23  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0     1e-08   0.00014       6      75 ..     132     223 ..     127     224 .. 0.79

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 1e-08
                  HHHTCE...CTTEEEEECTTEEEETTTTTTTHTSTTHHHHTT---BHHHHH....................HHHHHHHHHHHHHHGCGBE--B CS
   PF00173.23   6 evskhn...kekdswvvirgkVYDvskflkdhpggasailafaGkDaTeaf....................enashseaaekllekyyrvGrl 75 
                  e+++       ++ +v+++g V++  +   ++ +g   ++  aG+DaT+++                    e a++  ++  + +ky  vG+l
  MMETSP1325-20131115|10599_1 132 ELAEWRgedFTGPLLVAVDGLVFNAWQGRHFYGPG-CEYHIMAGRDATRLLakqkleeeteaeraapltlaERATLAGWVLTFKSKYEIVGKL 223
                  55555544467899*************55555555.5**************999999999999999888888888888888888887788876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       534  (0.0390579); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1189.77
//
Query:       MMETSP1325-20131115|10602_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 805.18
//
Query:       MMETSP1325-20131115|10603_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.3    8.9   5.6          2    8.3   3.9    1.4  1  PF05501.6 Domain of unknown function (DUF755)


Domain annotation for each model (and alignments):
>> PF05501.6  Domain of unknown function (DUF755)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.9   0.00015         2      21     114 ..       2      97 ..       1      98 [] 0.63

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00015
    PF05501.6  21 qkqkkqkqssttgttdgalLqkqLlkEcqktsqLiqlsqqlqqkkqkkrkeqkkssqthkkkkkksrnvssrsakkksakkr..kksssSSsssss 114
                  q+q++  +s+ ++  + a+L++  + E     +L++  ++l + +++   +  +++ ++    kk+r+vs++ +    + +   k++ sSSsssss
  MMETSP1325-20131115|10603_1   2 QQQQESAASIDQLLAEIAALKQRPRSEQILELRLQEAEERLRSLAEPVIDSDGEEVGYELPPAKKRRRVSQEGEGEDGRASGsgKERASSSSSSSS 97 
                  677777888888899999999999999988999998888887777666666666666666666677776665444333333343333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       686  (0.0501755); expected 273.4 (0.02)
Passed bias filter:                      534  (0.0390579); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.41s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|10601_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-53  181.3   0.0    2.2e-53  181.2   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.2   0.0   1.6e-57   2.2e-53     501     707 ..       2     211 ..       1     212 [. 0.97

  Alignments for each domain:
  == domain 1    score: 181.2 bits;  conditional E-value: 1.6e-57
   PF03028.10 501 glkGeltiteeleellkallkdkvPasWakkaypslkgLaswlsdllkRikqlekwtedllkpktvwlsglfnpqsfltairQsvarknkwpLdklalqvevtkkekeetes.apeegvyveGlfleGarwdlkekllaesklkellsalpviwvkaveadkkeeksvyecPvYktkaRke...ltlvltlklktkekkskwilagvalll 707
                  +l Ge+ +++el +l + l+++ +P+ W+k+a +++kgL+sw++ +++R +q+ kw ++ ++p ++wlsgl +p+s+lta  Q+++r ++wpLdk +  + vtk ++ +t + + + g+yv+Gl+l Ga wd +++ l  +k+k+l+ +lp+++v ++e +k + + +++ PvY t+aR++   + +v++++l+++e++s+w+l+gval l
  MMETSP1325-20131115|10601_1   2 ALVGEIGMSDELDSLGDMLYNAFLPDPWRKLAPATEKGLGSWMQHFTRRNNQYAKWIDE-GEPAVIWLSGLGIPESYLTACVQTTCRMHNWPLDKSENYTVVTKITDASTVTeNLASGCYVQGLYLMGADWDIENDCLGIQKPKVLVVELPLLQVIPIESSKLKLQGTFRTPVYVTEARRNamgVGMVFEADLASQEHQSHWVLQGVALCL 211
                  578*****************************************************998.*************************************99999998887766658899****************************************************************9999************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.55
# Mc/sec: 936.76
//
Query:       MMETSP1325-20131115|10604_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 449.93
//
Query:       MMETSP1325-20131115|10605_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|10607_1  [L=273]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.042   13.4   0.0      0.092   12.3   0.0    1.5  1  PF06677.7  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
       0.11   12.5   0.1       0.41   10.6   0.0    2.1  3  PF07804.7  HipA-like C-terminal domain
       0.11   12.1   0.4       0.36   10.6   0.1    2.0  2  PF00514.18 Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> PF06677.7  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     2e-05     0.092       8      23 ..      33      48 ..      31      61 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2e-05
    PF06677.7  8 lLlkGatMLdehCpkC 23
                 l+ kG tMLd  C+++
  MMETSP1325-20131115|10607_1 33 LMVKGITMLDNVCSSD 48
                 89***********986 PP

>> PF07804.7  HipA-like C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.2   5.6e+03      37      47 ..     101     111 ..      71     125 .. 0.50
   2 ?   10.6   0.0   9.1e-05      0.41      34      67 ..     179     212 ..     146     219 .. 0.83
   3 ?   -3.6   0.0       2.4   1.1e+04      46      57 ..     236     247 ..     235     248 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.2
    PF07804.7  37 aadveelfrrl 47 
                  +  + +lf rl
  MMETSP1325-20131115|10607_1 101 KVHRGALFARL 111
                  33333444444 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 9.1e-05
    PF07804.7  34 adpaadveelfrrllfniligNsDdHlkNfsfll 67 
                  +++ ++ e+++ r++  i++g +DdH+k  sf +
  MMETSP1325-20131115|10607_1 179 SKKVKKGERFMIRDIDKIIMGHGDDHMKKSSFGK 212
                  455777889999****************999965 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 2.4
    PF07804.7  46 rllfniligNsD 57 
                  r+l+ + ++N+D
  MMETSP1325-20131115|10607_1 236 RDLLCLSFQNTD 247
                  789999999999 PP

>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   7.9e-05      0.36       3      23 ..       5      25 ..       4      34 .. 0.87
   2 ?   -2.9   0.0       1.4   6.2e+03      25      38 ..      74      87 ..      70      88 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 7.9e-05
                 HHHHHHHHCHHHHHHHHHHC- CS
   PF00514.18  3 enkqavieaGavppLvqLLks 23
                 +n+q ++++G++ +L++ ++s
  MMETSP1325-20131115|10607_1  5 KNIQVIVQHGGIGILLNIMNS 25
                 79***************9994 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 1.4
                 SHHHHHHHHHHHHH CS
   PF00514.18 25 deevqeeAawALsN 38
                  ee+q +A  AL  
  MMETSP1325-20131115|10607_1 74 EEELQAAAQSALLS 87
                 68899999999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.59
# Mc/sec: 1108.82
//
Query:       MMETSP1325-20131115|10608_1  [L=361]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-16   60.6   0.5    3.4e-16   59.2   0.4    1.7  1  PF10520.4 Kua-ubiquitin conjugating enzyme hybrid localisation domain
  ------ inclusion threshold ------
        1.4    8.7   5.5         13    5.5   0.1    2.7  3  PF13515.1 Fusaric acid resistance protein-like


Domain annotation for each model (and alignments):
>> PF10520.4  Kua-ubiquitin conjugating enzyme hybrid localisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.4     5e-20   3.4e-16       1     154 [.      49     199 ..      49     210 .. 0.75

  Alignments for each domain:
  == domain 1    score: 59.2 bits;  conditional E-value: 5e-20
    PF10520.4   1 illadlvsGlvhWaaDtygsaetpilGkfirafreHHvdptaitrhdfietngdnlllsivvllvlalklalsakseltlalglhvfvltlailvaltnqiHkwsHtkkklppl...vrllqdlglllsrkeHrkHHrapyetnYCivtgwlNkvld 154
                  +l +d+ s l+h ++D   s  +p +  + + f+eHH  p++ t  + +    + ++    +  ++ l +   ++     + ++++ +l l+ +   t+  H ++H+ +    +   + +lqd+++ll++ +H++HH+apy +n+ iv+g+ N++l+
  MMETSP1325-20131115|10608_1  49 YLYSDMYSALLHSVLDDKKSLAIPGIAPVAKGFQEHHDFPQETTAGKGLLVLCSDTVRIQWLCGIFGLVF--GRR----DSTTYVLILLKLLCCAYGTQIGHYYAHNRHLCVGWlkpLSWLQDAHILLPPAHHWNHHKAPYSKNFGIVSGLANPLLN 199
                  6899************************************999965543333333333222222222222..222....2234455566777777778778*****97665555222579**********************************997 PP

>> PF13515.1  Fusaric acid resistance protein-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1    0.0019        13      65      90 ..      24      49 ..       7      72 .. 0.76
   2 ?   -2.1   0.0      0.43   2.9e+03      70      93 ..     111     134 ..     104     153 .. 0.54
   3 ?    5.1   0.3    0.0027        18      47      76 ..     193     222 ..     186     279 .. 0.65

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0019
    PF13515.1 65 llvfllaflillfkkrnyalafiflt 90
                 ++++l+a++ ++f  r+y l+++ + 
  MMETSP1325-20131115|10608_1 24 VAIALWALYVIFFGPRPYLLMTVGMY 49
                 8999**************88776544 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.43
    PF13515.1  70 laflillfkkrnyalafifltlla 93 
                  ++++ l+f +r+++  +++l  l+
  MMETSP1325-20131115|10608_1 111 CGIFGLVFGRRDSTTYVLILLKLL 134
                  455555555555544444443222 PP

  == domain 3    score: 5.1 bits;  conditional E-value: 0.0027
    PF13515.1  47 allallllallpgnlalillvfllaflill 76 
                  ++  ll  +l+p n++++++++l+ +++ +
  MMETSP1325-20131115|10608_1 193 LANPLLNPVLHPDNYQFYVILTLWCLFTMF 222
                  33334444788899********99988833 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.64
# Mc/sec: 1351.70
//
Query:       MMETSP1325-20131115|10610_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0011   18.0   0.0     0.0021   17.1   0.0    1.5  1  PF00069.20 Protein kinase domain
  ------ inclusion threshold ------
       0.05   13.4   0.1       0.13   12.0   0.1    1.6  1  PF07200.8  Modifier of rudimentary (Mod(r)) protein


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0     3e-07    0.0021     230     260 .]       4      34 ..       1      34 [. 0.93

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 3e-07
                  HHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
   PF00069.20 230 seelkdlikkllekdpakRltaeeilkhpwl 260
                  s+++kd+i+kll  dp +R+ta+++lkh wl
  MMETSP1325-20131115|10610_1   4 SDNAKDFIRKLLILDPLQRITAKSALKHAWL 34 
                  5799************************996 PP

>> PF07200.8  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.9e-05      0.13     105     144 ..     129     167 ..     126     172 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.9e-05
                  HHHHHHHHHHHS-S----HHHHHHHHHHHHHHHHHHHHHH CS
    PF07200.8 105 akkadeeseelaekflegeidletFlkkykekRtlyhlRr 144
                  a++a+ee++ + + +++ + d++  ++ y e + ++h++r
  MMETSP1325-20131115|10610_1 129 AEQAEEEANMMRQTIANADGDVDVVMQHYEEVK-QSHMQR 167
                  789************************999987.577777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       557  (0.0407402); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 985.17
//
Query:       MMETSP1325-20131115|10611_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 174.73
//
Query:       MMETSP1325-20131115|10613_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|10614_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 382.40
//
Query:       MMETSP1325-20131115|10617_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|10609_1  [L=553]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.82u 0.37s 00:00:01.19 Elapsed: 00:00:00.54
# Mc/sec: 2454.05
//
Query:       MMETSP1325-20131115|10616_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0097   14.4   3.6      0.012   14.1   2.5    1.1  1  PF03595.12 C4-dicarboxylate transporter/malic acid transport protein
  ------ inclusion threshold ------
      0.041   13.0   0.4      0.041   13.0   0.3    2.1  2  PF00335.15 Tetraspanin family
       0.13   11.9  11.9       0.75    9.4   8.2    1.9  1  PF01284.18 Membrane-associating domain
       0.27    9.9   2.1       0.32    9.7   1.4    1.1  1  PF05987.8  Bacterial protein of unknown function (DUF898)
       0.37   10.0   1.8       0.48    9.6   1.3    1.2  1  PF01529.15 DHHC palmitoyltransferase
       0.76    9.8   4.0        3.2    7.8   2.7    1.9  1  PF13273.1  Protein of unknown function (DUF4064)


Domain annotation for each model (and alignments):
>> PF03595.12  C4-dicarboxylate transporter/malic acid transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   2.5   5.3e-06     0.012     179     268 ..      13     106 ..       7     115 .. 0.73

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.3e-06
   PF03595.12 179 vGlllalvllalv..lyrllfhklppealrptlfillGplgqgalailllgra....ave.lpkdaqvfrglalllalllwglglfwlflavlsvlr 268
                  ++ +++++++ +v  +   +++k p     p + i+lG +++ ++ +l l +     a++  ++d ++ +   +++a++ ++l +++++++vl++++
  MMETSP1325-20131115|10616_1  13 FAACFSILVTGCVgcFGTTVMRKYPT---PPAMGIFLGIVSVLSMQYLILSAVfageAQNaSQDDDESEYSNDVAFAVFACFLFIVFFIFSVLLFIY 106
                  33444444433333355555555554...499***************99998895544444444488889999999**************9999985 PP

>> PF00335.15  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   1.8e-05     0.041      48     110 ..      12      77 ..       3      84 .. 0.72
   2 ?    3.1   5.2     0.018        42      77     105 ..      84     112 ..      83     126 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.8e-05
   PF00335.15  48 liiviGviililgilGcigal.kesk...cllliyailllllflaelalailafvlrsqleaslksg 110
                    ++  ++il++g++Gc+g+   +++     ++i+  ++ +l +  l+l+++     + + ++++++
  MMETSP1325-20131115|10616_1  12 G-FAACFSILVTGCVGCFGTTvMRKYptpPAMGIFLGIVSVLSMQYLILSAVFAGEAQNASQDDDES 77 
                  3.4477889999*******662444467789999999999999988888888877777776666554 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.018
   PF00335.15  77 iyailllllflaelalailafvlrsqlea 105
                   +a++  +lf++++++++l f++r +l +
  MMETSP1325-20131115|10616_1  84 AFAVFACFLFIVFFIFSVLLFIYRGHLIT 112
                  6999********************98876 PP

>> PF01284.18  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   8.2   0.00033      0.75      47     140 ..      13      98 ..       7     118 .. 0.50

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00033
   PF01284.18  47 fvavfsfly.alallvlylfknkyftsilwplidlivdalaallwlvafialaaglrgvscafesnqgsaslkvrcgsaqaavaFgflavllfla 140
                  f+a+fs+l+   ++++ ++  +ky t+ +  +++ iv++l +   + ++++   +++          + +++++ ++   a ++F+++ +++f++
  MMETSP1325-20131115|10616_1  13 FAACFSILVtGCVGCFGTTVMRKYPTPPAMGIFLGIVSVLSMQYLILSAVFAGEAQNA---------SQDDDESEYSNDVAFAVFACFLFIVFFI 98 
                  4455555553333444433335566666666666666555554444444444444444.........1112222233333333333333333332 PP

>> PF05987.8  Bacterial protein of unknown function (DUF898)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.4   0.00014      0.32     189     250 ..      41     110 ..      16     113 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00014
    PF05987.8 189 lllvalllllvlgllllaalaalaaadsla........lealaivvllvlvvlvllvllllllayyrarl 250
                  +++++l ++ vl++  l + a++a+++++a        + +  ++++++ +++++++++ +ll++yr  l
  MMETSP1325-20131115|10616_1  41 AMGIFLGIVSVLSMQYLILSAVFAGEAQNAsqdddeseYSNDVAFAVFACFLFIVFFIFSVLLFIYRGHL 110
                  5666666666666666666666666555556777777766666666667777777788888888887655 PP

>> PF01529.15  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.3   0.00021      0.48      96     156 ..      44     104 ..      17     115 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00021
   PF01529.15  96 lfllyltlllvialllslrifvryvlltkqssvniisnlskillvvlsaiallfllfllaf 156
                  +fl  +++l++ +l+ls++ + + ++  + ++ + +sn   + ++   +++++f++++l+f
  MMETSP1325-20131115|10616_1  44 IFLGIVSVLSMQYLILSAVFAGEAQNASQDDDESEYSNDVAFAVFACFLFIVFFIFSVLLF 104
                  6888899999999999999999999999999999999998555555556666666666655 PP

>> PF13273.1  Protein of unknown function (DUF4064)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.7    0.0014       3.2       9      75 ..      43     106 ..      10     111 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0014
    PF13273.1   9 gliGgilgilagllalvigilgsselkkeeqeeaeeleeetildllstlvlilgvlaiilsilgiig 75 
                  g+  gi+++l +  +++ ++++  e   ++++++++++e  +  +++ +  +l+++++i+s+l +i+
  MMETSP1325-20131115|10616_1  43 GIFLGIVSVLSMQYLILSAVFAG-EA--QNASQDDDESEYSNDVAFAVFACFLFIVFFIFSVLLFIY 106
                  44446777775555555555544.44..344444445566666677888899999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       919  (0.0672177); expected 273.4 (0.02)
Passed bias filter:                      650  (0.0475424); expected 273.4 (0.02)
Passed Vit filter:                        93  (0.00680222); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 681.07
//
Query:       MMETSP1325-20131115|10619_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   14.2   0.2      0.028   13.7   0.1    1.2  1  PF04977.10 Septum formation initiator
      0.024   14.8   0.3      0.028   14.6   0.2    1.0  1  PF08232.7  Striatin family


Domain annotation for each model (and alignments):
>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   4.1e-06     0.028      26      61 ..      10      45 ..       9      53 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.1e-06
   PF04977.10 26 iaalqaelaklkaeneeLeaevkdLksdedyieeqA 61
                 ia+l  +++k   en++L   v++Lk+d  ++++ A
  MMETSP1325-20131115|10619_1 10 IAQLSYDYQKATHENMQLSTAVALLKQDTKRLRAAA 45
                 899*************************99998776 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.2   4.1e-06     0.028      33      90 ..       9      65 ..       8      75 .] 0.72

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 4.1e-06
    PF08232.7 33 rIakLeGerrglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaee 90
                 rIa+L  + ++++  + +L + v  L++  k+ ra   ++  +v +  +qe+++ + +
  MMETSP1325-20131115|10619_1  9 RIAQLSYDYQKATHENMQLSTAVALLKQDTKRLRAAAVEKGLAVPET-QQEDQNGHAA 65
                 9**********************************877744444443.3333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       574  (0.0419836); expected 273.4 (0.02)
Passed bias filter:                      469  (0.0343037); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|10620_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.3   2.1      0.082   12.8   1.4    1.7  1  PF13638.1  PIN domain
        4.9    6.8  18.9       0.24   10.9   1.1    3.7  4  PF02809.15 Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> PF13638.1  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.4   1.2e-05     0.082      21     105 ..      21     134 ..       7     144 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.2e-05
    PF13638.1  21 eendvviPitVleELDklKkesses........................srelaelarealrlleealek..............esgrlrvqtlaerleeeele...kdknDnrIlavalelqeek 105
                    + v++  tV+eE++k K+++ ++                        +           r  +++ +k                + +   t++er e+   +   + + +++ l+ ale+++++
  MMETSP1325-20131115|10620_1  21 AATIVIVTATVIEEVEKNKRKNGKAnrfkytatlakkpgnckaasgcksG----------RRNKKNKEKKgkgavddeamyeadMAQAIALSTEEERAEAA--RksrDAEDEDKLLKLALEMSAKE 134
                  56789*****************9766666655555444432222222220..........22211111112222222222222211222222223333322..02334567788999999888776 PP

>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   1.3   0.00065       4.4       4      17 ..      92     105 ..      92     106 .. 0.92
   2 ?   10.9   1.1   3.5e-05      0.24       1      17 [.     118     134 ..     118     135 .. 0.88
   3 ?   -2.2   0.1      0.57   3.9e+03       9      14 ..     161     166 ..     154     166 .. 0.48
   4 ?   -2.7   0.1      0.81   5.6e+03       5      13 ..     171     179 ..     171     179 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00065
                  HHHHHHHHHHHHHH CS
   PF02809.15   4 EedLqlALalSlee 17 
                  E+d ++A+alS ee
  MMETSP1325-20131115|10620_1  92 EADMAQAIALSTEE 105
                  7899*********9 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 3.5e-05
                  CCCHHHHHHHHHHHHHH CS
   PF02809.15   1 msEEedLqlALalSlee 17 
                  ++E+  L+lAL++S  e
  MMETSP1325-20131115|10620_1 118 EDEDKLLKLALEMSAKE 134
                  59************766 PP

  == domain 3    score: -2.2 bits;  conditional E-value: 0.57
                  HHHHHH CS
   PF02809.15   9 lALalS 14 
                  lA a+S
  MMETSP1325-20131115|10620_1 161 LAVAVS 166
                  566665 PP

  == domain 4    score: -2.7 bits;  conditional E-value: 0.81
                  HHHHHHHHH CS
   PF02809.15   5 edLqlALal 13 
                  +dL +A +l
  MMETSP1325-20131115|10620_1 171 DDLEAAVEL 179
                  799999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1501  (0.109786); expected 273.4 (0.02)
Passed bias filter:                      541  (0.0395699); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.34s 00:00:01.20 Elapsed: 00:00:00.50
# Mc/sec: 1619.94
//
Query:       MMETSP1325-20131115|10622_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|10624_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-14   53.4   0.0    3.1e-14   53.2   0.0    1.1  1  PF04577.9 Protein of unknown function (DUF563)
  ------ inclusion threshold ------
      0.042   14.0   0.0      0.057   13.5   0.0    1.2  1  PF13759.1 Putative 2OG-Fe(II) oxygenase


Domain annotation for each model (and alignments):
>> PF04577.9  Protein of unknown function (DUF563)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   0.0   4.6e-18   3.1e-14     136     204 ..       1      70 [.       1      73 [. 0.92

  Alignments for each domain:
  == domain 1    score: 53.2 bits;  conditional E-value: 4.6e-18
    PF04577.9 136 vdpeelsfeeQvalfssakvivgphGsgLtnllFappgtrvlelvsp.prldlefenlaallgldyvyvi 204
                  vd+++l+f+ Q+++ ++++v++gphG+gL + +F+p  ++++el+   ++ +++f nla ++g++y +v 
  MMETSP1325-20131115|10624_1   1 VDFSTLDFRGQIEIDATTDVMIGPHGAGLMHNVFMPDRAALIELWIDgSSANRHFHNLAFWSGHAYQGVQ 70 
                  7999*******************************999******9985666666************9885 PP

>> PF13759.1  Putative 2OG-Fe(II) oxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   8.3e-06     0.057      10      35 ..      48      73 ..      42      99 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 8.3e-06
    PF13759.1 10 ggyhkrHiHpnsvlSgvyylkvpees 35
                 g++ +rH H+ +++Sg+ y  v+ ++
  MMETSP1325-20131115|10624_1 48 GSSANRHFHNLAFWSGHAYQGVQMGN 73
                 78899**************7665433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 449.32
//
Query:       MMETSP1325-20131115|10625_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.32s 00:00:00.69 Elapsed: 00:00:00.67
# Mc/sec: 432.77
//
Query:       MMETSP1325-20131115|10623_1  [L=288]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00075   18.4   0.0      0.001   18.0   0.0    1.1  1  PF14351.1 Domain of unknown function (DUF4401)


Domain annotation for each model (and alignments):
>> PF14351.1  Domain of unknown function (DUF4401)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   7.4e-08     0.001      95     197 ..      17     118 ..      15     144 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 7.4e-08
    PF14351.1  95 ilallyflrpdvllrfLsavllllallvllaelllsglissn.lelallllalllgllllnlalkeill.eaarrsalleplayglllsllaillvlsgnslllg 197
                   l +l++l++d++l+ + a  ++l ++vl+ el+ +  +s   l ++  l+ +++ + l++l    +     ++++++++    g+l++ +++ll l+ + +  +
  MMETSP1325-20131115|10623_1  17 TLSCLLLLFKDRSLQSVVALSTALFFVVLFRELKPYYDSSTDcLAYVCGLFTVFCSISLVALD---MEGkDGEKSKERWNGTIGGMLFAGIGALLGLVLYLTRES 118
                  5789*******************************5544444999999999999999977776...55678889999999999**********999987776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.43s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 1437.81
//
Query:       MMETSP1325-20131115|10627_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.48s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 547.09
//
Query:       MMETSP1325-20131115|10628_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       438  (0.0320363); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.41s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 514.22
//
Query:       MMETSP1325-20131115|10626_1  [L=266]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.7    8.1  23.3        3.2    7.9  11.0    3.0  2  PF10152.4 Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  11.0   0.00024       3.2      65     146 ..     122     204 ..       2     206 .. 0.71
   2 ?   -1.9   0.5      0.24   3.3e+03      60      86 ..     224     250 ..     208     266 .] 0.47

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00024
    PF10152.4  65 aarrsggpppppgaraeaaaqeaeaaraetpaeqepealaegrltvrkdpryakYfkmlklgVpaeavknKmqaeG..ldpell 146
                   a  ++gppp+ +++++a+a  a+ +r+++  +++  a   g   ++ +p y+ Yf m+k g p+ a   K + +   ldp++l
  MMETSP1325-20131115|10626_1 122 MAALKKGPPPTSTSTSTATAT-ATTPRTSDADKSNAHADGGGSGVISCHPVYRDYFGMMKRGMPKGAAIHKFIKDNpkLDPDVL 204
                  233334444444423222222.22333333333334444556667779***********************9998544666666 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.24
    PF10152.4  60 pappaaarrsggpppppg.....araeaaaqe 86 
                  ++++++++ ++g+++++g     +      ++
  MMETSP1325-20131115|10626_1 224 KKVEPQRKAKKGKAAEKGgggdgT-----DAT 250
                  455556666666666665443221.....111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       571  (0.0417642); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.69
# Mc/sec: 923.81
//
Query:       MMETSP1325-20131115|10631_1  [L=447]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-95  316.7   0.0    1.2e-94  316.5   0.0    1.0  1  PF01116.15 Fructose-bisphosphate aldolase class-II
  ------ inclusion threshold ------
      0.018   14.9   0.1      0.094   12.5   0.0    2.3  3  PF13378.1  Enolase C-terminal domain-like


Domain annotation for each model (and alignments):
>> PF01116.15  Fructose-bisphosphate aldolase class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  316.5   0.0   1.7e-98   1.2e-94       2     285 ..      77     421 ..      76     423 .. 0.97

  Alignments for each domain:
  == domain 1    score: 316.5 bits;  conditional E-value: 1.7e-98
   PF01116.15   2 lvslkellkkAkengyAvpafnvnnletinavleaaeekksPvIlqvsegaakya...............gaealaalveaaaekasvpvalhlDHgak.....ledlleaiea........gfsSvMiDgSelpleeNiaitkevverahalgvsvEaElGriggeedgveneee.kealyTdpeeaeefvertgvda.....lAvaiGnvHGvykpglepkldlellkeiqkavs..........dvpLvlHGgsgvpdeeiqeaiklGvvKiNidtdlqlaftkav.......rkylaeqpge...........ydprkllreaeeamkerveekievlgsag 285
                  ++ lk+ll++A+ ngyA+pa+n++ +++ina+leaa+++++PvI+q+s g+ +++               ga + a++v+a+ae+++vpv+lh+DH+ k     ++++l+a e+        +fsS+M+D+Se+pleeNi+++k ++er+++l++++E+ElG++ggeedgv+ne++ +e+lyT+pee+++++e++         +A+a+GnvHGvy+p  + kld e+l + q +++          +v++v+HGgsg+   +i++ai++Gv+K+Nidtd+q+++++++       r yl++q g+           ydpr+++r+ae +  +r+++ +++l++ +
  MMETSP1325-20131115|10631_1  77 GQALKDLLQHAQDNGYAIPAVNCVTSSSINACLEAARKNDAPVIIQFSSGGSQFYagkgldntdykaaiaGAVSGAYHVRAMAEQYGVPVILHTDHCGKkllpwMDGMLAASEQyyanhgepLFSSHMLDLSEEPLEENIETCKVYLERMAKLDMLLEMELGITGGEEDGVNNEDVaQEDLYTKPEEVWQVYEALASVEngmftVAAAFGNVHGVYSP-GNVKLDPEILGNSQVYIAdklglapgsaPVKFVFHGGSGSDIADIKRAIECGVIKMNIDTDTQWSYWSGIrefeaqyRPYLQTQIGNpdgadkpnkkyYDPRECVRAAETSTVDRLAQCFDDLNAVN 421
                  57899************************************************************************************************************************************************************************9999****************99777778889**************.66899************999**************************************************99999999999999999************************************9876 PP

>> PF13378.1  Enolase C-terminal domain-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.95   6.5e+03      35      70 ..      40      76 ..      38      97 .. 0.60
   2 ?   12.5   0.0   1.4e-05     0.094      25      54 ..     142     172 ..     128     218 .. 0.79
   3 ?   -3.0   0.0       0.9   6.1e+03       6      26 ..     335     354 ..     332     360 .. 0.80

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.95
                 HHHHHHHHHHTT-EEEEBSC.SHHHHHHHHHHHHHTS CS
    PF13378.1 35 alriaalaeayglpvaphsm.espiglaaalhlaaal 70
                 alr+    e+ g+p+   +   s   + a++h   ++
  MMETSP1325-20131115|10631_1 40 ALRMGITSEEMGIPCEDECAlPSYPNMPASVHPGVVT 76
                 6667777777777777666555555666666654444 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 1.4e-05
                  BTTTCH-HHHHHHHHHHHHHTT-EEEEBS.C CS
    PF13378.1  25 dlakvGGitealriaalaeayglpvaphs.m 54 
                  ++a +G +++a ++ a+ae+yg+pv+ h+ +
  MMETSP1325-20131115|10631_1 142 KAAIAGAVSGAYHVRAMAEQYGVPVILHTdH 172
                  66778999********************933 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 0.9
                  SHHHHHHHHHTT--SEEEEBT CS
    PF13378.1   6 srrdfrrlleagavdiiqpdl 26 
                  + +d++r++e g++  +++d 
  MMETSP1325-20131115|10631_1 335 DIADIKRAIECGVIK-MNIDT 354
                  678999999999997.77775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.37s 00:00:01.12 Elapsed: 00:00:00.62
# Mc/sec: 1727.70
//
Query:       MMETSP1325-20131115|10632_1  [L=271]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        3.2    7.4   6.8        1.2    8.7   0.1    2.7  2  PF11636.3 Troponin I residues 1-32


Domain annotation for each model (and alignments):
>> PF11636.3  Troponin I residues 1-32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.1   8.8e-05       1.2       2      27 ..      86     111 ..      85     113 .. 0.90
   2 ?   -0.2   1.4     0.054   7.3e+02       9      16 ..     190     199 ..     185     201 .. 0.65

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 8.8e-05
    PF11636.3   2 aeeeevvpepPkPpPvvaPPllRRkS 27 
                  aee+e  +++ +P P  aP  + R S
  MMETSP1325-20131115|10632_1  86 AEEDEDAEDEAAPGPYMAPAKVGRAS 111
                  7999999************9999877 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.054
    PF11636.3   9 pepPkP..pP 16 
                    pP+P  pP
  MMETSP1325-20131115|10632_1 190 AAPPAPtgPP 199
                  5677776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.49
# Mc/sec: 1325.33
//
Query:       MMETSP1325-20131115|10635_1  [L=202]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          9    5.2  10.1         12    4.7   7.0    1.1  1  PF13203.1 Putative metallopeptidase domain


Domain annotation for each model (and alignments):
>> PF13203.1  Putative metallopeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   7.0   0.00091        12     141     238 ..      92     186 ..      77     192 .. 0.58

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.00091
    PF13203.1 141 kkkkrsdkqsdsstdggdgsgesegqgeqdskknrkdapekakvralakgesadlaespegksapeaeaeearewrerlaraleagraaGklpgaLar 238
                  +++k++d+ +++++++ ++   +e ++eq++++++k++     +  +++ + ++ +++p  ++ ++a a+ +  +   ++ ++ a++a+Gk+   L+ 
  MMETSP1325-20131115|10635_1  92 QQQKKGDNGEEREEGRVAQGRGQEPKREQEQEQKKKQG---EDTEDREAANLDETEPKPLQQQLEDAIAARNFAACRIIQGQIDAVEADGKAAPDLTD 186
                  33445555555544444444444444444444444444...344555555566666665556666665655557777788888999999998777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1049  (0.0767262); expected 273.4 (0.02)
Passed bias filter:                      581  (0.0424956); expected 273.4 (0.02)
Passed Vit filter:                        83  (0.0060708); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.55
# Mc/sec: 880.12
//
Query:       MMETSP1325-20131115|10636_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 273.27
//
Query:       MMETSP1325-20131115|10638_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.57
# Mc/sec: 260.29
//
Query:       MMETSP1325-20131115|10639_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10640_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       371  (0.0271358); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 869.98
//
Query:       MMETSP1325-20131115|10641_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.69    9.3   3.5          1    8.7   0.6    2.1  2  PF07171.7 MlrC C-terminus


Domain annotation for each model (and alignments):
>> PF07171.7  MlrC C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.6   7.4e-05         1      35      69 ..       4      38 ..       1      45 [. 0.87
   2 ?    0.7   0.0     0.022   2.9e+02      89     107 ..     105     123 ..      79     125 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 7.4e-05
    PF07171.7 35 atiwDPeaveaaaaAGeGAtislrlGgkvgkesge 69
                 + iwD  a+ aa a G GA  + +l+g+ +   g+
  MMETSP1325-20131115|10641_1  4 VKIWDTSAAGAAGAGGGGAGATATLVGQKDMGVGK 38
                 78*************************98876665 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.022
    PF07171.7  89 lggsrvelGrtavvriggv 107
                  l++ ++++G++avv   +v
  MMETSP1325-20131115|10641_1 105 LEEEEMSMGTSAVVAGSDV 123
                  678899******9976655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 704.24
//
Query:       MMETSP1325-20131115|10642_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-12   47.1   0.1    2.9e-12   46.3   0.0    1.4  1  PF09713.5 Plant protein 1589 of unknown function (A_thal_3526)


Domain annotation for each model (and alignments):
>> PF09713.5  Plant protein 1589 of unknown function (A_thal_3526)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   2.1e-16   2.9e-12      13      53 ..       1      41 [.       1      42 [. 0.97

  Alignments for each domain:
  == domain 1    score: 46.3 bits;  conditional E-value: 2.1e-16
    PF09713.5 13 msreEcvkaLdhhanIsplvTstVWkeLekeNkdFFetYgh 53
                 m++ E++ +L+ +anI+p +T +VW++Le+eN d F +Y++
  MMETSP1325-20131115|10642_1  1 MTQSEIIATLQAQANIQPSLTCLVWQKLEEENSDTFYAYNV 41
                 9**************************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      380  (0.027794); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 596.83
//
Query:       MMETSP1325-20131115|10643_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|10644_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-09   37.9   0.6    3.1e-09   36.7   0.4    1.6  1  PF13499.1  EF-hand domain pair
    1.4e-08   33.7   1.6     0.0064   16.1   0.0    2.9  3  PF13405.1  EF-hand domain
    2.3e-07   30.1   1.2    8.8e-07   28.3   0.6    2.1  2  PF13833.1  EF-hand domain pair
    3.1e-07   29.1   1.5      0.017   14.3   0.0    2.8  3  PF00036.27 EF hand
    1.5e-06   27.1   1.5      0.042   13.0   0.1    2.5  2  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.4   1.1e-12   3.1e-09       2      63 ..     220     277 ..     219     280 .. 0.88

  Alignments for each domain:
  == domain 1    score: 36.7 bits;  conditional E-value: 1.1e-12
    PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63 
                  ++++ + lD +gdg ld++eL+  +++lg +l+ + v+ +    fk lD+++ G ls++Ef+
  MMETSP1325-20131115|10644_1 220 MRRILRVLDESGDGELDRAELKGGFRNLGLDLKSQTVEAL----FKLLDEDNGGSLSMDEFY 277
                  68899************************76666555555....*******999*******7 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       4.4   1.2e+04      20      27 ..     120     127 ..     120     129 .. 0.82
   2 !   16.0   0.1   2.5e-06    0.0069       2      31 .]     220     248 ..     219     248 .. 0.90
   3 !   16.1   0.0   2.3e-06    0.0064       3      27 ..     257     281 ..     255     285 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 4.4
                  -HHHHHHH CS
    PF13405.1  20 eELrdaLr 27 
                  +E++ aLr
  MMETSP1325-20131115|10644_1 120 KEFLEALR 127
                  69999998 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 2.5e-06
                  HH---GCC-------B---HHHHHHH.H-- CS
    PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrkslg 31 
                  +r++ + +D  gdG++d++EL+  +r +lg
  MMETSP1325-20131115|10644_1 220 MRRILRVLDESGDGELDRAELKGGFR-NLG 248
                  789999****************9998.665 PP

  == domain 3    score: 16.1 bits;  conditional E-value: 2.3e-06
                  H---GCC-------B---HHHHHHH CS
    PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                  +++Fkl+D d+ G ++ +E+   Lr
  MMETSP1325-20131115|10644_1 257 EALFKLLDEDNGGSLSMDEFYLGLR 281
                  689*****************98887 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0036       9.7      28      50 ..     221     243 ..     219     245 .. 0.86
   2 !   28.3   0.6   3.2e-10   8.8e-07       2      48 ..     232     277 ..     231     282 .. 0.95

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0036
    PF13833.1  28 dilfrefDtdgdGkisfeEFcvl 50 
                  + ++r++D  gdG ++ +E +  
  MMETSP1325-20131115|10644_1 221 RRILRVLDESGDGELDRAELKGG 243
                  5799************9998765 PP

  == domain 2    score: 28.3 bits;  conditional E-value: 3.2e-10
    PF13833.1   2 kGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFc 48 
                  +G+++r+eLk   ++lgl+ l+ ++v++lf+++D d+ G +s +EF+
  MMETSP1325-20131115|10644_1 232 DGELDRAELKGGFRNLGLD-LKSQTVEALFKLLDEDNGGSLSMDEFY 277
                  8**********9999****.**************************7 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   3.9e+03      20      27 ..     120     127 ..     120     128 .. 0.82
   2 !   14.3   0.0   6.1e-06     0.017       3      28 ..     221     246 ..     219     247 .. 0.91
   3 !   13.1   0.0   1.4e-05     0.038       2      26 ..     256     280 ..     255     282 .. 0.89

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 1.4
                  HHHHHHHH CS
   PF00036.27  20 eEfkealk 27 
                  +Ef+eal+
  MMETSP1325-20131115|10644_1 120 KEFLEALR 127
                  59*99997 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 6.1e-06
                  HHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27   3 keaFkefDkDgdGkIsfeEfkealkk 28 
                  +++ +++D  gdG ++  E+k  +++
  MMETSP1325-20131115|10644_1 221 RRILRVLDESGDGELDRAELKGGFRN 246
                  8999*****************99886 PP

  == domain 3    score: 13.1 bits;  conditional E-value: 1.4e-05
                  HHHHHHHHCTTTSSEBEHHHHHHHH CS
   PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                  ++ +Fk++D D+ G +s +Ef   l
  MMETSP1325-20131115|10644_1 256 VEALFKLLDEDNGGSLSMDEFYLGL 280
                  6789*****************8766 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.1   1.9e-05     0.052       3      22 ..     222     241 ..     220     244 .. 0.88
   2 !   13.0   0.1   1.6e-05     0.042       2      22 ..     257     277 ..     256     280 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.9e-05
                  HHHHHH--S----B-HHHHH CS
    PF13202.1   3 dtFrafDlNgDGkIsreELk 22 
                   ++r++D  gDG ++r ELk
  MMETSP1325-20131115|10644_1 222 RILRVLDESGDGELDRAELK 241
                  56899**************8 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 1.6e-05
                  HHHHHHH--S----B-HHHHH CS
    PF13202.1   2 kdtFrafDlNgDGkIsreELk 22 
                  +++F+ +D ++ G +s++E++
  MMETSP1325-20131115|10644_1 257 EALFKLLDEDNGGSLSMDEFY 277
                  789*****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      438  (0.0320363); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.59
# Mc/sec: 1161.62
//
Query:       MMETSP1325-20131115|10645_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 753.85
//
Query:       MMETSP1325-20131115|10646_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   18.7   2.2     0.0021   18.2   1.5    1.2  1  PF01392.17 Fz domain


Domain annotation for each model (and alignments):
>> PF01392.17  Fz domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   1.5   1.5e-07    0.0021      44      89 ..      12      55 ..       4      78 .. 0.85

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 1.5e-07
   PF01392.17 44 vkCsealelflCsllapkCeeklreekilpCrelCeavkeeCekvl 89
                  +C++a ++  C l +p+C++  ++  + +C++ C +  ++C  + 
  MMETSP1325-20131115|10646_1 12 PQCKNAYKAYACWLNFPECDKFGNS--LAMCKSACINFFRYCDYEE 55
                 49******************97754..9*********999998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|10648_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|10650_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       406  (0.0296957); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|10651_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 262.24
//
Query:       MMETSP1325-20131115|10649_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.07   13.6   2.8       0.63   10.6   0.2    2.3  2  PF08238.7 Sel1 repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.009   1.2e+02      24      37 ..       4      17 ..       1      19 [. 0.84
   2 ?   10.6   0.2   4.6e-05      0.63      12      39 .]      30      57 ..      23      57 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.009
    PF08238.7 24 pekAleWyekAAeq 37
                  ++Al ++e+AAe 
  MMETSP1325-20131115|10649_1  4 NARALGLFELAAEE 17
                 5789********95 PP

  == domain 2    score: 10.6 bits;  conditional E-value: 4.6e-05
    PF08238.7 12 mylnGlgGvpkdpekAleWyekAAeqGh 39
                 ++  G+ Gv+ d++ A  ++ +AA++G+
  MMETSP1325-20131115|10649_1 30 IFSGGYVGVDEDKQAAHGYLVQAASAGY 57
                 444455668889999***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 647.02
//
Query:       MMETSP1325-20131115|10652_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00013   21.4   0.0    0.00017   21.1   0.0    1.1  1  PF02225.17 PA domain


Domain annotation for each model (and alignments):
>> PF02225.17  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.2e-08   0.00017      57      99 ..      11      54 ..       9      55 .. 0.95

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 1.2e-08
   PF02225.17 57 GAkgviiin.pseaalpggtkvgpsdvgiPvvvisradgealla 99
                 G+ g++++n ++++ + ++  + ++d+ +Pv++i++++g +l++
  MMETSP1325-20131115|10652_1 11 GGVGALVVNtDDTTISMPSGNQRTHDIRFPVAMIDQSNGLRLIR 54
                 999******9******************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 339.85
//
Query:       MMETSP1325-20131115|10653_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       507  (0.0370831); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 702.09
//
Query:       MMETSP1325-20131115|10654_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-06   26.0   0.4    5.3e-05   22.6   0.2    2.1  2  PF13405.1  EF-hand domain
    5.8e-06   25.1   1.3      1e-05   24.3   0.3    1.8  2  PF00036.27 EF hand
    6.5e-06   25.5   1.0    8.9e-06   25.1   0.7    1.4  1  PF13833.1  EF-hand domain pair
     0.0001   21.3   0.1    0.00024   20.1   0.0    1.6  1  PF13202.1  EF hand
      0.002   18.0   0.4     0.0035   17.3   0.3    1.5  1  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.048   13.2   0.1      0.056   13.0   0.0    1.2  1  PF12763.2  Cytoskeletal-regulatory complex EF hand
       0.11   12.5   0.0       0.14   12.1   0.0    1.1  1  PF04433.12 SWIRM domain


Domain annotation for each model (and alignments):
>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.13   2.6e+02       2      12 ..      14      24 ..      13      29 .. 0.84
   2 !   22.6   0.2   2.7e-08   5.3e-05       2      27 ..      26      51 ..      25      57 .. 0.87

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.13
                 HH---GCC--- CS
    PF13405.1  2 lreaFklfDkd 12
                 lre+F + D++
  MMETSP1325-20131115|10654_1 14 LREVFPMVDDT 24
                 89***999975 PP

  == domain 2    score: 22.6 bits;  conditional E-value: 2.7e-08
                 HH---GCC-------B---HHHHHHH CS
    PF13405.1  2 lreaFklfDkdgdGkidaeELrdaLr 27
                 +  +++ fDk+gdG +d +E++  L 
  MMETSP1325-20131115|10654_1 26 FDTLYRFFDKNGDGSVDVKEFVVTLG 51
                 567899***************98887 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.66   1.3e+03       2      10 ..      14      22 ..      13      23 .. 0.81
   2 !   24.3   0.3   5.2e-09     1e-05       2      26 ..      26      50 ..      25      53 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.66
                 HHHHHHHHC CS
   PF00036.27  2 lkeaFkefD 10
                 l+e+F ++D
  MMETSP1325-20131115|10654_1 14 LREVFPMVD 22
                 899998888 PP

  == domain 2    score: 24.3 bits;  conditional E-value: 5.2e-09
                 HHHHHHHHCTTTSSEBEHHHHHHHH CS
   PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkeal 26
                 ++ + + fDk+gdG ++++Ef+  l
  MMETSP1325-20131115|10654_1 26 FDTLYRFFDKNGDGSVDVKEFVVTL 50
                 5677899**************9766 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.7   4.5e-09   8.9e-06      24      51 ..      22      50 ..       4      53 .. 0.84

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 4.5e-09
    PF13833.1 24 eee.vdilfrefDtdgdGkisfeEFcvll 51
                 +++ +d+l+r fD +gdG ++ +EF+v l
  MMETSP1325-20131115|10654_1 22 DDTmFDTLYRFFDKNGDGSVDVKEFVVTL 50
                 55669*********************975 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.2e-07   0.00024       7      21 ..      32      46 ..      31      51 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.2e-07
                 HH--S----B-HHHH CS
    PF13202.1  7 afDlNgDGkIsreEL 21
                  fD+NgDG ++ +E+
  MMETSP1325-20131115|10654_1 32 FFDKNGDGSVDVKEF 46
                 6*************9 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.3   1.8e-06    0.0035      39      63 ..      23      47 ..       3      50 .. 0.71

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.8e-06
    PF13499.1 39 revldyifkelDkngdGvlsfeEfl 63
                 +++ d + + +DkngdG ++  Ef+
  MMETSP1325-20131115|10654_1 23 DTMFDTLYRFFDKNGDGSVDVKEFV 47
                 3466777999999999999999996 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.9e-05     0.056      25      73 ..       8      54 ..       1      60 [. 0.76

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.9e-05
    PF12763.2 25 kltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlif 73
                 +l++ ++  v+    +++  ++ ++ + d + dg++d +ef++++ +++
  MMETSP1325-20131115|10654_1  8 ELNKTQLREVFP--MVDDTMFDTLYRFFDKNGDGSVDVKEFVVTLGMLL 54
                 555666666654..46778889999******************998765 PP

>> PF04433.12  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.1e-05      0.14      47      82 ..       2      37 ..       1      38 [. 0.93

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 7.1e-05
   PF04433.12 47 renprkyltvtearrlikgidvslvskvhafLekwG 82
                 r++ + +l++t+ r+ ++ +d +  + ++ f++k+G
  MMETSP1325-20131115|10654_1  2 RKHETTELNKTQLREVFPMVDDTMFDTLYRFFDKNG 37
                 678899************88*************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|10656_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-06   25.2   0.1      6e-06   25.1   0.0    1.1  1  PF07690.11 Major Facilitator Superfamily
     0.0014   17.1   1.0     0.0017   16.9   0.7    1.1  1  PF00083.19 Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   8.8e-10     6e-06     118     188 ..      30      99 ..       4     117 .. 0.70

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 8.8e-10
   PF07690.11 118 eergralgllsagfslGailgpllggllasslgWravFlilailsllaavlvllllprepperkrkspaee 188
                  + ++ + g + a+f +G  +g+ l+g++++ +g r +F    i+  ++++  ++ ++r +++++++ +++ 
  MMETSP1325-20131115|10656_1  30 DLKATGQGSFFASFYIGRSIGYSLAGWISETVGMRFMFKSTLIAVGFLCL-LVANFWRMEHNNGGPFETDL 99 
                  3688999**************************77665555444444444.24889999999999887777 PP

>> PF00083.19  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.7   2.4e-07    0.0017      45      97 ..      33      83 ..       6      88 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 2.4e-07
   PF00083.19 45 svlsglivssflvgaliGslfaglladrfGRkksllvalvlfvigavlqaaak 97
                 ++ +g +++sf +g+ iG+ +ag+++++ G +  +++ + l ++g ++  +a+
  MMETSP1325-20131115|10656_1 33 ATGQGSFFASFYIGRSIGYSLAGWISETVGMR--FMFKSTLIAVGFLCLLVAN 83
                 456789************************99..7788888888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       356  (0.0260386); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.59
# Mc/sec: 499.58
//
Query:       MMETSP1325-20131115|10655_1  [L=249]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-05   23.0   2.6    4.4e-05   22.3   1.8    1.3  1  PF00641.13 Zn-finger in Ran binding protein and others
    4.6e-05   22.8   0.1    6.7e-05   22.3   0.1    1.2  1  PF03959.8  Serine hydrolase (FSH1)
    0.00013   21.6   0.0    0.00022   20.9   0.0    1.4  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.016   13.5   0.0      0.021   13.2   0.0    1.1  1  PF10142.4  PhoPQ-activated pathogenicity-related protein
      0.061   12.4   0.0      0.093   11.8   0.0    1.2  1  PF01738.13 Dienelactone hydrolase family


Domain annotation for each model (and alignments):
>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   1.8   1.6e-08   4.4e-05       4      29 ..     203     228 ..     200     229 .. 0.94

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 1.6e-08
   PF00641.13   4 dWdCskClvqNfawstkCvaCqapkp 29 
                   W C  C++ N  +st+C aC++pk+
  MMETSP1325-20131115|10655_1 203 EWACVMCTFINNGSSTACMACGTPKS 228
                  6***********************96 PP

>> PF03959.8  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   2.4e-08   6.7e-05     143     204 ..      28      87 ..      20      94 .. 0.85

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 2.4e-08
    PF03959.8 143 GfkleepkyeeyyeedkiqtpsLhvlGelDtvvdeerseaLaeafknsskvlkHpggHfvPn 204
                  Gf+++e   ++  + d+  +p L+v Ge+D +++++ s++++e+++++++++  +g+H  P+
  MMETSP1325-20131115|10655_1  28 GFNINEL--SPIAHADQCFIPALFVAGESDDFIKHHHSQQIHEKYAGDKNLVIVEGDHNSPR 87 
                  5556554..33445678889**************************************9997 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   7.9e-08   0.00022     102     141 ..      43      83 ..      10      84 .. 0.82

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 7.9e-08
    PF12695.2 102 l..pvllihGtrDgvvppeeaeklakalpgdaelvviegasH 141
                  +  p l++ G++D+++++++++++++++ gd+ lv++eg +H
  MMETSP1325-20131115|10655_1  43 CfiPALFVAGESDDFIKHHHSQQIHEKYAGDKNLVIVEG-DH 83 
                  145**********************************97.55 PP

>> PF10142.4  PhoPQ-activated pathogenicity-related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   7.6e-06     0.021     252     320 ..      34     102 ..       6     114 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 7.6e-06
    PF10142.4 252 vDPlsylkrlkipkyvinasnDeffvpdsanlyfseLkgekalryvpNasHslvs.kkvleslvaflkrv 320
                    P+++ ++  ip + +++  D+f    +++   ++  g+k l +v   +H+  + +  ++s++ fl+  
  MMETSP1325-20131115|10655_1  34 LSPIAHADQCFIPALFVAGESDDFIKHHHSQQIHEKYAGDKNLVIV-EGDHNSPRpRFLFDSVTIFLQTY 102
                  46999*****************************************.78899888799999999999875 PP

>> PF01738.13  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.4e-05     0.093     136     174 ..      35      73 ..      12      80 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.4e-05
   PF01738.13 136 kpleeaakikapilahlgeeDpfipaeaaedleealaka 174
                  +p++ a++   p+l+++ge D+fi++ + ++++e+ a  
  MMETSP1325-20131115|10655_1  35 SPIAHADQCFIPALFVAGESDDFIKHHHSQQIHEKYAGD 73 
                  6889999999************************99544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.52
# Mc/sec: 1147.49
//
Query:       MMETSP1325-20131115|10657_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|10658_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-22   77.4   0.0      1e-21   77.1   0.0    1.1  1  PF02233.11 NAD(P) transhydrogenase beta subunit


Domain annotation for each model (and alignments):
>> PF02233.11  NAD(P) transhydrogenase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   0.0   7.5e-26     1e-21     413     463 ..       2      52 ..       1      53 [. 0.97

  Alignments for each domain:
  == domain 1    score: 77.1 bits;  conditional E-value: 7.5e-26
                  ---GGG---EEEE-SSS---------GGGGSTTEEEE---HHHHHHHHHHH CS
   PF02233.11 413 vlevekakqvivlkrslasGyagvdnplffkentqmllgdakksveeilee 463
                  vlev++ak+vi++krs+a+Gyagv+np+ffkent mllgdak+++++++++
  MMETSP1325-20131115|10658_1   2 VLEVWHAKNVIIMKRSMAQGYAGVENPVFFKENTDMLLGDAKQTCDALNSK 52 
                  8**********************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 438.58
//
Query:       MMETSP1325-20131115|10659_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|10661_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 328.20
//
Query:       MMETSP1325-20131115|10663_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 312.57
//
Query:       MMETSP1325-20131115|10660_1  [L=368]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-24   86.3   0.0      5e-24   85.2   0.0    1.5  1  PF01734.17 Patatin-like phospholipase
    1.6e-19   69.7   0.0    2.7e-19   68.9   0.0    1.4  1  PF11815.3  Domain of unknown function (DUF3336)


Domain annotation for each model (and alignments):
>> PF01734.17  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.0   7.2e-28     5e-24       1     201 [.     111     317 ..     111     319 .. 0.91

  Alignments for each domain:
  == domain 1    score: 85.2 bits;  conditional E-value: 7.2e-28
   PF01734.17   1 LvlsGGGtrGafslgalkaL.kkelgdrfdiisGtSaGaiiaallalgrdpaalvedlrelllnkffdrdl...lirelaanlaarlsgllgpgglfdaealrellrkvlgdltlkrlsarlgklpllkslataaqavpaittataasastantanslyteddeddvpladavraSsafPglf..............ppvsldgelyvDGGildNnPil 201
                  L+lsGGG+   +++g++ka+ + el +++++isGtS+Gai+a +la+ +  + l++ + +  + +f+++        +++ +l+ +l ++  ++ l +++ +++  + + g  t+ ++ a+++k  +              + +++  + +    + l+++   + v +a+av+aS+++Pg++               p+++dg +++DG+il  +P++
  MMETSP1325-20131115|10660_1 111 LCLSGGGAITMYHMGVVKAFiEAELYKNIRVISGTSGGAITAGMLATKTESELLRDVIVDNVSTDFKRDGSqaaEGVRWFPKLWDQLVNFTRKRVLVERTEFKRCCDYYYGTTTFAEAYAHTKKHVS------------ISVSNSQLGCMYSGKRRVLLNHISSPHVTVASAVAASCSLPGIMlpnklwakdadgniVPFEVDGVEFIDGSILADLPFK 317
                  9******************659************************************************966655556666666666777777788888888888899****************55............57899*************************************************************************96 PP

>> PF11815.3  Domain of unknown function (DUF3336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.0     4e-23   2.7e-19      42     144 ..       3     104 ..       1     105 [. 0.94

  Alignments for each domain:
  == domain 1    score: 68.9 bits;  conditional E-value: 4e-23
    PF11815.3  42 ndaWkeedesayYDyklvkerlkqlrearekkdieellallrtclkrnlggienprlYsksyvGTKklveeYideveasleflaeskeltkeeklkflkqlra 144
                  +++W+  + s+  +   +++++++l ear+ k++++l +ll   lkrn  gi +  lY+++ vGTK  +e++ +e+ a+le+l+es+el+ +ekl+f+k+ r+
  MMETSP1325-20131115|10660_1   3 QEKWR-HSTSDFPQAAILRKTTSRLAEARTAKNLKDLQFLLSGLLKRNHLGIHEDALYEHTAVGTKVDIEAFQAEIDACLETLLESEELPFDEKLSFFKKERR 104
                  56785.667788889999*********************************************************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.40s 00:00:01.10 Elapsed: 00:00:00.68
# Mc/sec: 1296.85
//
Query:       MMETSP1325-20131115|10662_1  [L=310]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       725  (0.0530281); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 0.35s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 1485.74
//
Query:       MMETSP1325-20131115|10667_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.6   4.6       0.12   12.6   3.2    1.2  1  PF12374.3 Double-sex mab3 related transcription factor 1


Domain annotation for each model (and alignments):
>> PF12374.3  Double-sex mab3 related transcription factor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.2     9e-06      0.12      26      48 ..      17      39 ..       5      43 .] 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 9e-06
    PF12374.3 26 lfsvegrsptqtlssstsspaat 48
                 l++ ++rsp+q++sss++s+a+t
  MMETSP1325-20131115|10667_1 17 LVLFSSRSPPQSSSSSSGSAAST 39
                 567899*******9999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.33s 00:00:00.61 Elapsed: 00:00:00.93
# Mc/sec: 110.80
//
Query:       MMETSP1325-20131115|10666_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0042   16.8   0.1     0.0069   16.2   0.0    1.4  1  PF09716.5 Malarial early transcribed membrane protein (ETRAMP)


Domain annotation for each model (and alignments):
>> PF09716.5  Malarial early transcribed membrane protein (ETRAMP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0     5e-07    0.0069      41      83 ..      55     100 ..      19     101 .. 0.71

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 5e-07
    PF09716.5  41 kiddelekk...kknkKillisaiatalallvggalGlgiykkkkk 83 
                    dd++e k   k+ +  l+i  +  alal++gg +G++  +k+++
  MMETSP1325-20131115|10666_1  55 GGDDDVETKvvvKQDNTTLIILGVCVALALAIGGCVGVYCTYKNRS 100
                  56677777777679999********************998877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 1148.25
//
Query:       MMETSP1325-20131115|10668_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-05   23.7   0.0    2.1e-05   23.7   0.0    1.0  1  PF00069.20 Protein kinase domain
  ------ inclusion threshold ------
      0.029   13.9   0.3      0.052   13.1   0.2    1.3  1  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0     3e-09   2.1e-05      77     168 ..      25     111 ..      13     112 .] 0.78

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 3e-09
                  EE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HH CS
   PF00069.20  77 leyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPE 168
                  +   +  +l+ +l  +++++   +  i++++ ++l+++H  g +H D K  N+    +g+ +i+D+  a      +        +  +m+PE
  MMETSP1325-20131115|10668_1  25 MPAGQR-NLAVVLL-QERVDLPLVVVIFTSLGRALAHVHAAGKLHGDFKLLNLVRMPDGTWRIIDLDGAVA---IGAPIGAKALSTAFMPPE 111
                  444433.4554444.7899999999*****************************************99965...444555555555566655 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   7.5e-06     0.052     152     196 ..      52      92 ..      25      95 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.5e-06
                  HHHHHHHHHHCSS--EEB-SS-SGGGEEEE.TTTTEEEE---TT-B CS
   PF01636.18 152 vlaalaallpgaeppvllHgDlhpgNllvd.pddgrvgviDfedag 196
                   l + +a+++   +++ lHgD+++ Nl+   ++ +r  +iD++ a 
  MMETSP1325-20131115|10668_1  52 SLGRALAHVH---AAGKLHGDFKLLNLVRMpDGTWR--IIDLDGAV 92 
                  5667788888...7999************9555555..9****996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 516.14
//
Query:       MMETSP1325-20131115|10669_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 367.10
//
Query:       MMETSP1325-20131115|10670_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 777.48
//
Query:       MMETSP1325-20131115|10671_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|10673_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       207  (0.0151404); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|10674_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|10675_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 606.14
//
Query:       MMETSP1325-20131115|10680_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 270.70
//
Query:       MMETSP1325-20131115|10678_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 405.91
//
Query:       MMETSP1325-20131115|10681_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 609.07
//
Query:       MMETSP1325-20131115|10683_1  [L=236]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   13.5   2.1        5.1    7.1   0.0    2.6  3  PF04550.7 Phage holin family 2


Domain annotation for each model (and alignments):
>> PF04550.7  Phage holin family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.77   1.1e+04      39      49 ..       9      19 ..       7      21 .. 0.81
   2 ?    5.9   0.1   0.00088        12      31      68 ..      52      89 ..      26     107 .. 0.81
   3 ?    7.1   0.0   0.00037       5.1      53      86 ..     150     183 ..     137     187 .. 0.80

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 0.77
    PF04550.7 39 vilGsavslva 49
                 + +G+a s+va
  MMETSP1325-20131115|10683_1  9 MAVGGARSVVA 19
                 66899999998 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.00088
    PF04550.7 31 tlrLvvGrvilGsavslvaGvaLiqlPdlsllalvgig 68
                 +l L vG +++ + +slv   aL q+   s  a +g+ 
  MMETSP1325-20131115|10683_1 52 SLSLCVGTTVVNTYLSLVKDRALAQIFGASASASAGVP 89
                 6789********************99888887777764 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.00037
    PF04550.7  53 LiqlPdlsllalvgigsalGilGsqvvelllkrk 86 
                  L+ +  ++    v+++s lG++G+++ e l+ r 
  MMETSP1325-20131115|10683_1 150 LMGIDLVNRPSNVALSSRLGVMGKSYAESLVART 183
                  55555566677799**************999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1108.90
//
Query:       MMETSP1325-20131115|10684_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.62
# Mc/sec: 734.37
//
Query:       MMETSP1325-20131115|10686_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-11   44.1   0.1    2.2e-11   43.5   0.1    1.2  1  PF14240.1 YHYH protein


Domain annotation for each model (and alignments):
>> PF14240.1  YHYH protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.1   1.6e-15   2.2e-11       2      70 ..      79     144 ..      78     145 .] 0.91

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 1.6e-15
    PF14240.1   2 itftiplsptlastptslslgavGvalnGvpidpaaaeaanegedaatleglDecggHvqptgaYHYHg 70 
                  + +t+  +p+la+++t++ lga+G++++Gvpi+++++     +  ++t++g+D +ggH +ptg YHYH 
  MMETSP1325-20131115|10686_1  79 YMLTVSSKPELAASTTATGLGAIGISVSGVPIYNQSE--GPTDVTESTASGFDWAGGHSGPTG-YHYHV 144
                  56789999*****************************..6667788899***********998.9**95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 709.13
//
Query:       MMETSP1325-20131115|10685_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-09   37.8   0.0    1.7e-09   37.4   0.0    1.2  1  PF12695.2  Alpha/beta hydrolase family
    1.9e-06   27.8   0.6    0.00016   21.5   0.4    2.1  1  PF12697.2  Alpha/beta hydrolase family
    3.4e-05   23.2   0.2        0.1   11.8   0.0    2.1  2  PF02230.11 Phospholipase/Carboxylesterase
    6.4e-05   22.1   0.1    0.00012   21.2   0.0    1.5  1  PF00326.16 Prolyl oligopeptidase family
    8.1e-05   21.8   0.6      0.022   13.9   0.1    2.1  2  PF01738.13 Dienelactone hydrolase family
    0.00028   20.3   0.0    0.00056   19.3   0.0    1.5  1  PF01764.20 Lipase (class 3)
    0.00077   19.1   0.0       0.13   11.8   0.0    2.2  2  PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
     0.0042   16.7   0.7      0.037   13.6   0.5    2.0  1  PF05728.7  Uncharacterised protein family (UPF0227)
     0.0069   15.7   0.1     0.0098   15.2   0.1    1.2  1  PF03959.8  Serine hydrolase (FSH1)
  ------ inclusion threshold ------
      0.012   15.7   0.1      0.025   14.7   0.0    1.5  2  PF00975.15 Thioesterase domain
      0.014   14.9   0.0      0.021   14.2   0.0    1.3  1  PF07859.8  alpha/beta hydrolase fold
      0.045   13.1   0.5          1    8.7   0.0    2.1  2  PF00561.15 alpha/beta hydrolase fold
      0.088   11.1   0.0       0.13   10.5   0.0    1.4  2  PF05448.7  Acetyl xylan esterase (AXE1)


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.0   1.6e-12   1.7e-09      57     134 ..       2     124 ..       1     130 [. 0.71

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 1.6e-12
    PF12695.2  57 leriilvGhSlGGgvalelag.................rd.drvkglvllapf...................pdgedlakltlpvllihGtrDgvvppeeaeklakalp..gdael.........v 134
                   ++i++ G+SlGG+va+++a+                 +   +++ lv    f                    + +++ k+t+p+l++   +D++vp++++++l++a+    ++++         +
  MMETSP1325-20131115|10685_1   2 GSKIVICGRSLGGAVAIHVAAqletmklehppscviieNSfTSISDLVG---FlfpylnipffkeqflrlrwKSIDHVGKITVPMLFLASVHDEIVPFQHMKQLHEAATsaRAKQFhqfdamhndI 124
                  679******************9999887666666666522344444442...023335555556666665546679999**************************999865555554444444444 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.4   1.5e-07   0.00016      67     210 ..       4     114 ..       1     126 [. 0.63

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 1.5e-07
                  -EEEE--------HHHHHH----......EEEEEEE------STT---TTHHHHHHHHHH----....--H..HHHHH-.----HHHHHH--GGGG....GG------HHHHTT--S-EEEEE-----HHHHHHHHHHHHHSTTEEEEE- CS
    PF12697.2  67 pvvlvGHSlGgavalaaaarrpd.....lvrglvlidppgplpasalrpagpsllrrllagraaalrdlaarafarlfd.gdelealvradaaalaellraalldadlrealarldvPvlviageaDrvvppeearrlaealpgarvvvl 210
                  ++v++G SlGgava+++aa+          + ++  +++                            dl + +++++++ +   e+++r              l+    +++++++vP+l++a+ +D++vp +++++l ea+  ar + +
  MMETSP1325-20131115|10685_1   4 KIVICGRSLGGAVAIHVAAQLETmklehPPSCVIIENSFT-------S-----------------ISDLVG-FLFPYLNiPFFKEQFLR--------------LRWKSIDHVGKITVPMLFLASVHDEIVPFQHMKQLHEAATSARAKQF 114
                  7889999999999999998765555552333344444444.......2.................222322.23333331333344444..............333444999***************************99987754433 PP

>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00042      0.44     105     142 ..       3      45 ..       1      61 [. 0.77
   2 !   11.8   0.0   9.9e-05       0.1     152     201 ..      78     125 ..      65     132 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00042
   PF02230.11 105 sriiigGFSqGaalalylaltspk.....plggivafsgalpl 142
                  s+i+i G S G+a+a++ a ++++     p +++++ +++ ++
  MMETSP1325-20131115|10685_1   3 SKIVICGRSLGGAVAIHVAAQLETmklehPPSCVIIENSFTSI 45 
                  79***************98765544233366777777776655 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 9.9e-05
   PF02230.11 152 kvakipilqlHgeeDevvplalgkaakellktllnkvelksyeglgHsil 201
                  k+  +p+l l    De+vp++++k+++e+ +++    +++++  +   i+
  MMETSP1325-20131115|10685_1  78 KI-TVPMLFLASVHDEIVPFQHMKQLHEAATSARA-KQFHQFDAMHNDIW 125
                  34.4899999999****************999988.99***995555555 PP

>> PF00326.16  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.2e-07   0.00012      62     174 ..       1     110 [.       1     141 [. 0.73

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.2e-07
                  -GGGEEE--------HHHHHHHH.....-GGG---EEEE-----TTTGGGS-..---GGGGT---TTSHHH.HHHHHHH-GGG-------EEEEEETT-SSS-THHHHHHHHHHH..- CS
   PF00326.16  62 dpdrlaitGgSyGGylvgaalnq.....rpdlFkaavaqvgvvdwltymsdtsllteaeymeygnpeeneegyeelspyspadnvkaypplllihGeeDdrvppaealklvaaLqkag 174
                  d ++++i G S GG ++  +++q       +  ++++ +++++       +   l +  y + +  +e+   + ++++++++ +  +++p+l++ + +D+ vp+++  +l  a  +a 
  MMETSP1325-20131115|10685_1   1 DGSKIVICGRSLGGAVAIHVAAQletmkLEHPPSCVIIENSFTSISDLVGF---LFP--YLNIPFFKEQFL-RLRWKSIDHVGK--ITVPMLFLASVHDEIVPFQHMKQLHEAATSAR 110
                  56899*********9988877731111134456777777777777777777...666..788776633333.448999999999..*********************99999887433 PP

>> PF01738.13  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0036       3.8      98     121 ..       3      26 ..       1      30 [. 0.87
   2 !   13.9   0.1   2.1e-05     0.022     138     188 ..      73     121 ..      59     123 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0036
   PF01738.13  98 kkvgvvGfClGGalalllAaenpe 121
                  +k++++G  lGGa+a+ +Aa+ ++
  MMETSP1325-20131115|10685_1   3 SKIVICGRSLGGAVAIHVAAQLET 26 
                  79******************9865 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 2.1e-05
   PF01738.13 138 leeaakikapilahlgeeDpfipaeaaedleealakankdlelkiYpgagH 188
                  ++ + ki+ p+l+++   D+++p +++++l+ea  ++  + +++ ++ a H
  MMETSP1325-20131115|10685_1  73 IDHVGKITVPMLFLASVHDEIVPFQHMKQLHEAA-TSARAKQFHQFD-AMH 121
                  677889***************************9.556666888888.777 PP

>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   5.3e-07   0.00056      65      99 ..       4      36 ..       1      43 [. 0.85

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 5.3e-07
                 EEEEE-------HHHHHHHHHHHT-...TTTEEEE CS
   PF01764.20 65 kivvtGHSLGGalAlLaaadlaenglnksslvtvy 99
                 kiv++G SLGGa+A+ +aa+l  ++l+  ++++++
  MMETSP1325-20131115|10685_1  4 KIVICGRSLGGAVAIHVAAQLETMKLE--HPPSCV 36
                 8*********************99987..555554 PP

>> PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00012      0.13      21      85 ..       2      71 ..       1      76 [. 0.77
   2 !    6.2   0.0    0.0064       6.7     110     138 ..      75     103 ..      67     121 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00012
                 ------B------HHHHHHHHHSS.....S---EEEE----------EEETTE..EE------GGG-EE- CS
    PF08840.6 21 kdkigllGiSkGgelalllasflk.....kisavvlingsavvvegkllykeeskvlpelkesleklkvn 85
                 ++ki ++G+S Gg++a+ +a+ l+     ++  +v+i  s +  ++   + +    +p +ke++ +l ++
  MMETSP1325-20131115|10685_1  2 GSKIVICGRSLGGAVAIHVAAQLEtmkleHPPSCVIIENSFTSISDLVGFLFPYLNIPFFKEQFLRLRWK 71
                 679*****************99875544466778888888888888877777777777777777777665 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0064
                  -GGG----EEEEE----SSS-HHHHHHHH CS
    PF08840.6 110 pverakgpillvvgedDknwpSkesaeka 138
                   v+++  p+l+++++ D+++p +++ +  
  MMETSP1325-20131115|10685_1  75 HVGKITVPMLFLASVHDEIVPFQHMKQLH 103
                  699*****************998887544 PP

>> PF05728.7  Uncharacterised protein family (UPF0227)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.5   3.5e-05     0.037      60     180 ..       4     125 ..       1     126 [. 0.75

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.5e-05
    PF05728.7  60 nillvGssLGGyyatrlgerfglrq.......vllnPalkplenlagklgeeavqstqetyvleeyhiielkalelsrlkrperilvllskqDevldyrravaefraaaeiveddgdHafkdvsehlq 180
                  +i+++G sLGG +a +++++    +       v++   ++  ++l g+l    + +    +  e+      k+++    k  +++l l+s +De+++ +++ +++++aa+   + + H+f  + + ++
  MMETSP1325-20131115|10685_1   4 KIVICGRSLGGAVAIHVAAQLETMKlehppscVIIENSFTSISDLVGFLFPYLNIP----FFKEQFLRLRWKSIDHV-GKITVPMLFLASVHDEIVPFQHM-KQLHEAATSARAKQFHQFDAMHNDIW 125
                  699**************999877664456667777777777777777776644444....66677777777777754.57788999999999999999876.56888888889999999988877765 PP

>> PF03959.8  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   9.3e-06    0.0098     106     200 ..       7     121 ..       2     122 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 9.3e-06
    PF03959.8 106 iiGFSqGaalaallaslleellkeakhpklkfailvsGfkleepk....................yeeyy..eedkiqtpsLhvlGelDtvvdeerseaLaeafkns..skvlkHpggH 200
                  i G S G+a+a  +a++le+++   +hp+  ++i  s  ++ +                       +     +  ki++p+L+     D++v+ + +++L+ea ++   +++++++  H
  MMETSP1325-20131115|10685_1   7 ICGRSLGGAVAIHVAAQLETMKL--EHPPSCVIIENSFTSISDLVgflfpylnipffkeqflrlrWK--SidHVGKITVPMLFLASVHDEIVPFQHMKQLHEAATSAraKQFHQFDAMH 121
                  8899***************9886..788766655555555555559999999999976666664322..12456788**************************9998666666666555 PP

>> PF00975.15  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   2.3e-05     0.025      69      99 ..       6      38 ..       2      46 .. 0.82
   2 ?   -2.9   0.0       5.3   5.6e+03     210     217 ..      98     105 ..      83     126 .. 0.54

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.3e-05
                 EEE------HHHHHHHHHHHHH..S--CEEEEE CS
   PF00975.15 69 aLfGySlGGllAfevArqLerq..geevasLil 99
                 ++ G SlGG +A  vA+qLe     + ++ +i+
  MMETSP1325-20131115|10685_1  6 VICGRSLGGAVAIHVAAQLETMklEHPPSCVII 38
                 688*****************9875565555554 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 5.3
                  TTHHHHHH CS
   PF00975.15 210 hftlleda 217
                  h+++l++a
  MMETSP1325-20131115|10685_1  98 HMKQLHEA 105
                  33333311 PP

>> PF07859.8  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     2e-05     0.021      69     102 ..       1      34 [.       1      48 [. 0.80

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2e-05
                  CCCEEEEE-------HHHHHHHHHHH-----EEE CS
    PF07859.8  69 dpsrivvaGdSaGGnLaaavalrardegepeiaa 102
                  d s+iv++G S GG  a +va+++   +  ++  
  MMETSP1325-20131115|10685_1   1 DGSKIVICGRSLGGAVAIHVAAQLETMKLEHPPS 34 
                  679******************9988876444433 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.067        70      45      65 ..       4      24 ..       1      38 [. 0.88
   2 ?    8.7   0.0   0.00095         1     165     218 ..      70     125 ..      51     136 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.067
                 SEEEEE-B---HHHHHHHHHC CS
   PF00561.15 45 kltlvGhSmGGmialayaaey 65
                 k+++ G S+GG+ a ++aa+ 
  MMETSP1325-20131115|10685_1  4 KIVICGRSLGGAVAIHVAAQL 24
                 69999*************985 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00095
                  HHHCCHHHT-TSSEEEEECCTTSCCHHCHHHHHHHCSTT...EEEEEETTHHCSHHH CS
   PF00561.15 165 wdvtetlktilvptlvisgtdDplvpykaseklaelipk...sqlvvidgpgHlafl 218
                  w  +  + +i+vp l + + +D +vp +++ +l e+  +    q++ +d+  H   +
  MMETSP1325-20131115|10685_1  70 WKSIDHVGKITVPMLFLASVHDEIVPFQHMKQLHEAATSaraKQFHQFDA-MHNDIW 125
                  555566778***********************999999956667777777.666555 PP

>> PF05448.7  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00013      0.13     173     198 ..       1      26 [.       1      58 [. 0.89
   2 ?   -3.3   0.0         2   2.1e+03     261     277 ..      79      95 ..      73     119 .. 0.68

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00013
                  -TTG---B-------HHHHHHHH-S- CS
    PF05448.7 173 DeervvvlGasqGGalalavaalepr 198
                  D +++v++G s GGa+a+ vaa  ++
  MMETSP1325-20131115|10685_1   1 DGSKIVICGRSLGGAVAIHVAAQLET 26 
                  6789***************9996555 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 2
                  --S-EEEEE----SSS- CS
    PF05448.7 261 ikapvllavgLeDkvcp 277
                  i +p+l+ ++++D++ p
  MMETSP1325-20131115|10685_1  79 ITVPMLFLASVHDEIVP 95 
                  55666666667776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.50u 0.39s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 700.82
//
Query:       MMETSP1325-20131115|10688_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-06   25.6   0.0       0.32   11.0   0.0    3.9  4  PF00560.28 Leucine Rich Repeat
    9.9e-06   24.9   0.0      0.011   15.1   0.0    3.1  3  PF12799.2  Leucine Rich repeats (2 copies)
    0.00021   20.9   0.1      0.068   13.1   0.0    3.3  3  PF13516.1  Leucine Rich repeat
    0.00035   20.1   0.0       0.97    9.8   0.0    3.9  4  PF13504.1  Leucine rich repeat
  ------ inclusion threshold ------
       0.13   11.8   0.3        6.4    6.4   0.0    2.9  3  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00012      0.32       2      14 ..       3      15 ..       2      27 .. 0.79
   2 ?    3.1   0.0     0.047   1.3e+02       2      14 ..      31      43 ..      30      55 .. 0.78
   3 !    6.0   0.0    0.0051        14       1      14 [.      64      77 ..      64      89 .. 0.82
   4 ?    0.0   0.0      0.47   1.3e+03       5      14 ..     127     136 ..     123     144 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00012
                 ESEEEETSSBCBC CS
   PF00560.28  2 LeeLdLsgNnlts 14
                 L+eLdLs+N+l+ 
  MMETSP1325-20131115|10688_1  3 LKELDLSDNPLSA 15
                 9**********85 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.047
                 ESEEEETSSBCBC CS
   PF00560.28  2 LeeLdLsgNnlts 14
                 L+++ L+g+++ +
  MMETSP1325-20131115|10688_1 31 LTKIWLDGCSIGE 43
                 899*******985 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.0051
                 TESEEEETSSBCBC CS
   PF00560.28  1 nLeeLdLsgNnlts 14
                 +Le  +L gNnl++
  MMETSP1325-20131115|10688_1 64 RLEFMSLAGNNLSD 77
                 5999********97 PP

  == domain 4    score: 0.0 bits;  conditional E-value: 0.47
                  EEETSSBCBC CS
   PF00560.28   5 LdLsgNnlts 14 
                  L+L +N+l s
  MMETSP1325-20131115|10688_1 127 LSLKDNPLVS 136
                  8999**9975 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   4.2e-06     0.011       3      38 ..       3      43 ..       1      54 [. 0.74
   2 !    5.8   0.0    0.0034       9.3       3      17 ..      65      79 ..      63      86 .. 0.68
   3 ?   -0.7   0.0      0.38     1e+03       6      15 ..     127     136 ..     126     147 .. 0.69

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 4.2e-06
    PF12799.2  3 LevLdLsnNnIkd.....lppelanLpnLktLnLsnNpisd 38
                 L++LdLs+N+++      + + l + + L+ ++L+++ i +
  MMETSP1325-20131115|10688_1  3 LKELDLSDNPLSAagieiIAELLPQARGLTKIWLDGCSIGE 43
                 99*******8885343324455677788*********9964 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0034
    PF12799.2  3 LevLdLsnNnIkdlp 17
                 Le+ +L++Nn++d  
  MMETSP1325-20131115|10688_1 65 LEFMSLAGNNLSDAA 79
                 777777777777743 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 0.38
    PF12799.2   6 LdLsnNnIkd 15 
                  L+L +N++ +
  MMETSP1325-20131115|10688_1 127 LSLKDNPLVS 136
                  6777777654 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   2.5e-05     0.068       4      23 ..       3      22 ..       2      23 .. 0.87
   2 ?   -0.0   0.0      0.45   1.2e+03       4      16 ..      31      43 ..      29      53 .. 0.80
   3 ?    3.0   0.0     0.045   1.2e+02       5      20 ..      66      81 ..      62      87 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.5e-05
    PF13516.1  4 LtsLdLsnNqigdeGlsaLa 23
                 L++LdLs+N+++  G++ +a
  MMETSP1325-20131115|10688_1  3 LKELDLSDNPLSAAGIEIIA 22
                 89**********99987665 PP

  == domain 2    score: -0.0 bits;  conditional E-value: 0.45
    PF13516.1  4 LtsLdLsnNqigd 16
                 Lt + L ++ ig 
  MMETSP1325-20131115|10688_1 31 LTKIWLDGCSIGE 43
                 6777789999996 PP

  == domain 3    score: 3.0 bits;  conditional E-value: 0.045
    PF13516.1  5 tsLdLsnNqigdeGls 20
                 +   L +N+++d  + 
  MMETSP1325-20131115|10688_1 66 EFMSLAGNNLSDAAAL 81
                 555799******8775 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00035      0.97       3      14 ..       3      14 ..       1      21 [. 0.89
   2 ?    0.7   0.0      0.37     1e+03       3      14 ..      31      42 ..      29      45 .. 0.83
   3 ?    3.7   0.0     0.037     1e+02       1      14 [.      63      76 ..      63      83 .. 0.87
   4 ?    0.0   0.0       0.6   1.6e+03       6      14 ..     127     135 ..     122     138 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00035
    PF13504.1  3 LkeLdLsgnrLt 14
                 LkeLdLs+n+L 
  MMETSP1325-20131115|10688_1  3 LKELDLSDNPLS 14
                 9********995 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.37
    PF13504.1  3 LkeLdLsgnrLt 14
                 L++  L g+++ 
  MMETSP1325-20131115|10688_1 31 LTKIWLDGCSIG 42
                 89999****985 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.037
    PF13504.1  1 pnLkeLdLsgnrLt 14
                 ++L++ +L+gn+L 
  MMETSP1325-20131115|10688_1 63 SRLEFMSLAGNNLS 76
                 5899*******996 PP

  == domain 4    score: 0.0 bits;  conditional E-value: 0.6
    PF13504.1   6 LdLsgnrLt 14 
                  L+L +n+L 
  MMETSP1325-20131115|10688_1 127 LSLKDNPLV 135
                  99999*986 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0023       6.4      27      38 ..       3      14 ..       1      41 [. 0.57
   2 ?    2.8   0.0     0.032        89      25      38 ..      63      76 ..      29      83 .. 0.61
   3 ?   -3.4   0.0       2.8   7.7e+03      54      60 ..     127     133 ..     124     138 .. 0.59

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0023
    PF13855.1 27 LkvLdLsgnnlk 38
                 Lk+LdLs+n l+
  MMETSP1325-20131115|10688_1  3 LKELDLSDNPLS 14
                 666666666664 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.032
    PF13855.1 25 snLkvLdLsgnnlk 38
                 s+L+ ++L gnnl+
  MMETSP1325-20131115|10688_1 63 SRLEFMSLAGNNLS 76
                 66777777777776 PP

  == domain 3    score: -3.4 bits;  conditional E-value: 2.8
    PF13855.1  54 LnLsgNr 60 
                  L+L++N+
  MMETSP1325-20131115|10688_1 127 LSLKDNP 133
                  4444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 748.86
//
Query:       MMETSP1325-20131115|10690_1  [L=34]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.32s 00:00:00.61 Elapsed: 00:00:00.45
# Mc/sec: 181.06
//
Query:       MMETSP1325-20131115|10687_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-18   65.2   0.0    4.3e-18   65.2   0.0    1.0  1  PF01504.13 Phosphatidylinositol-4-phosphate 5-Kinase


Domain annotation for each model (and alignments):
>> PF01504.13  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   0.0   3.2e-22   4.3e-18     183     250 ..      77     148 ..      24     150 .. 0.84

  Alignments for each domain:
  == domain 1    score: 65.2 bits;  conditional E-value: 3.2e-22
   PF01504.13 183 eeeekekgiesed.....ekevlylgiIDiLqeYtlkKkleslvksllklkgkdisvvsPkeYakRFlkfiek 250
                   ++e+++gi+s+d      +ev+++giIDiLq+Y+ +K++e+++k + k+k++dis+v+P  Ya+RF++f++ 
  MMETSP1325-20131115|10687_1  77 PFREEQGGIRSRDeqghrLSEVYFFGIIDILQTYNRRKQAETFFKGF-KHKKYDISCVEPPLYASRFTEFMTA 148
                  67788999999999999999***************************.9999*******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 786.63
//
Query:       MMETSP1325-20131115|10692_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.075   12.8   1.5       0.13   12.1   0.3    1.9  2  PF14007.1 YtpI-like protein


Domain annotation for each model (and alignments):
>> PF14007.1  YtpI-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   9.3e-06      0.13       2      57 ..     140     198 ..     139     205 .. 0.86
   2 ?   -2.2   0.0      0.25   3.4e+03      38      68 ..     212     243 ..     202     245 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 9.3e-06
    PF14007.1   2 vilivlslvfyvyykvkafrtkdplekkllsakasi..alGlflilfginqlfl.lrst 57 
                  vil+v ++v+  + k++ + + ++  +++ +++a +  ++G++l++ g++ +      t
  MMETSP1325-20131115|10692_1 140 VILVVQAAVLNGLAKRRMRLSAKNYMRGVAASQADMirCVGVMLVAAGVIRVPAlIGGT 198
                  89999*****************************99889*******9998765545555 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.25
    PF14007.1  38 alGlflilfginqlfl.lrstvtlvvgaiflv 68 
                    G++ ++f+i  l    rs v+l ++ +f +
  MMETSP1325-20131115|10692_1 212 GAGALPSSFSILLLHEiARSFVDLLIVPLFAI 243
                  56677777888877777788888888777755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       421  (0.0307929); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.62
# Mc/sec: 1020.38
//
Query:       MMETSP1325-20131115|10693_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 742.40
//
Query:       MMETSP1325-20131115|10694_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00034   20.7   2.5    0.00037   20.6   1.7    1.1  1  PF00264.15 Common central domain of tyrosinase


Domain annotation for each model (and alignments):
>> PF00264.15  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   1.7   2.7e-08   0.00037      19     103 ..      35     128 ..       2     160 .. 0.63

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 2.7e-08
                  SSSSSS----S----TTHHHHHHHHHHHHHHHHHH--....------B---S..........--SS--HHHH-SEEE-TSST-.............EEE-T..T CS
   PF00264.15  19 keaakknkgyciHgsvlFltWHRpYlllfEqalreecgyaapdvrlPYWdwa..........eeelpedlansaifdkepegk.........gggcvtnplysf 103
                   + a+ +  +  H  v  +t H + ++ fE a++ ++    p++++PYWd++                   + ++f+++             +++ +t++   +
  MMETSP1325-20131115|10694_1  35 LKGAAARGFDHLHDGVGLPTQHIAMTAEFELAMQAVN----PELTVPYWDYTidsyetrkkyG------GLDGKMFQDSELWGpkwwgntstDKHHITDGRWAY 128
                  356667778899**********************999....99*********98884444432......44444444333222233333554333344444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 831.08
//
Query:       MMETSP1325-20131115|10695_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|10696_1  [L=492]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-23   81.1   0.0    1.3e-22   80.2   0.0    1.5  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
      1e-08   35.2   0.0    0.00034   20.6   0.0    2.5  2  PF13401.1  AAA domain
    1.3e-06   27.5   0.0    2.8e-06   26.4   0.0    1.6  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    2.9e-06   26.9   0.1    5.9e-05   22.6   0.0    2.4  2  PF07728.9  AAA domain (dynein-related subfamily)
    2.4e-05   24.6   0.0    0.00012   22.4   0.0    2.1  1  PF13191.1  AAA ATPase domain
      6e-05   22.1   0.0    0.00018   20.6   0.0    1.8  2  PF01078.16 Magnesium chelatase, subunit ChlI
     0.0002   22.0   0.0    0.00065   20.3   0.0    1.9  1  PF13207.1  AAA domain
    0.00099   18.9   0.0     0.0023   17.6   0.0    1.7  1  PF13671.1  AAA domain
    0.00099   18.6   0.0     0.0036   16.9   0.0    2.0  1  PF13245.1  Part of AAA domain
     0.0011   18.4   0.1      0.067   12.6   0.0    2.6  3  PF05729.7  NACHT domain
     0.0025   17.1   0.0      0.043   13.0   0.0    2.2  2  PF13481.1  AAA domain
     0.0052   16.5   0.0       0.01   15.6   0.0    1.4  1  PF13173.1  AAA domain
     0.0053   16.2   0.0      0.012   15.1   0.0    1.7  1  PF07726.6  ATPase family associated with various cellular activities (AAA)
     0.0067   16.2   0.1       0.07   12.9   0.0    2.3  2  PF13521.1  AAA domain
     0.0081   16.3   0.0      0.019   15.1   0.0    1.8  1  PF13238.1  AAA domain
       0.01   15.2   0.0       0.44    9.8   0.0    2.2  2  PF05707.7  Zonular occludens toxin (Zot)
  ------ inclusion threshold ------
      0.011   14.9   0.2        4.1    6.4   0.0    2.4  2  PF12846.2  AAA-like domain
      0.028   14.4   0.0      0.061   13.3   0.0    1.5  1  PF00910.17 RNA helicase
      0.029   13.8   0.0      0.059   12.8   0.0    1.4  1  PF13479.1  AAA domain
      0.031   13.6   0.0        0.1   11.9   0.0    1.9  1  PF00158.21 Sigma-54 interaction domain
      0.051   12.1   0.0      0.099   11.2   0.0    1.4  1  PF06068.8  TIP49 C-terminus
       0.07   11.8   0.0       0.15   10.8   0.0    1.4  1  PF01057.12 Parvovirus non-structural protein NS1
      0.086   12.1   0.0       0.19   11.0   0.0    1.5  1  PF01695.12 IstB-like ATP binding protein
       0.09   12.3   0.0         19    4.7   0.0    2.5  3  PF01637.13 Archaeal ATPase
       0.11   11.9   0.0       0.11   11.8   0.0    1.2  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   0.0   2.4e-25   1.3e-22       1     131 [.      51     177 ..      51     178 .. 0.93

  Alignments for each domain:
  == domain 1    score: 80.2 bits;  conditional E-value: 2.4e-25
                  EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH.SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHHTTSCCEEE-- CS
   PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr.sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkieie 131
                  +llyGppGtGKT++a+ +a+ +g+++  +sg ++   + +++  ++++lf+ ak ++k   lfiDE++a+ +sr +++ see ++++n+Ll +    +    ++++++atnr ++ld+a++ +R+d+ + ++
  MMETSP1325-20131115|10696_1  51 LLLYGPPGTGKTMVAQRLARASGMDYALMSGGDVG-PLGKDAVTELHALFRWAKGSSKGLLLFIDEAEAFLGSRsKTAMSEELRNALNALLYQTGTQSY---NFMMVLATNRAEDLDSAVI-DRMDESLLFP 177
                  69********************************9.8999999**********999955***************6666888999999999999888888...7******************.****999887 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   6.3e-07   0.00034       5      27 ..      49      71 ..      48      79 .. 0.92
   2 !   12.1   0.0   0.00026      0.14      78     121 ..      97     154 ..      73     161 .. 0.71

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 6.3e-07
    PF13401.1  5 gilvvtGesGvGKTtllrrlarq 27
                 ++l+++G++G+GKT++++rlar 
  MMETSP1325-20131115|10696_1 49 RHLLLYGPPGTGKTMVAQRLARA 71
                 589*****************985 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 0.00026
    PF13401.1  78 alqealrrrrt.rlliiDEaqrL.....seealeelrslldd........etgvklvl 121
                  al + ++  ++  ll iDEa+ +     ++ + eelr  l++        ++++ +vl
  MMETSP1325-20131115|10696_1  97 ALFRWAKGSSKgLLLFIDEAEAFlgsrsKTAMSEELRNALNAllyqtgtqSYNFMMVL 154
                  3444444444459*********659765499999999888888886676666666666 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   5.1e-09   2.8e-06      34     110 ..      32     116 ..      27     174 .. 0.77

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 5.1e-09
    PF05496.7  34 eklkifieaakkreealdhvllyGpPGlGkttlakiiakelgvelkvtsgPvl.....ekagdlaalltnl...eekdvlfidei 110
                  ++l++  + a++ + +  h+llyGpPG Gkt +a+ +a+  g++    sg  +     +  ++l al+      +++ +lfide 
  MMETSP1325-20131115|10696_1  32 QQLAVSTRNARRNRVPFRHLLLYGPPGTGKTMVAQRLARASGMDYALMSGGDVgplgkDAVTELHALFRWAkgsSKGLLLFIDEA 116
                  789999999**999*************************9999999888754411111233455555543311134556777775 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.1e-07   5.9e-05       1      29 [.      50      78 ..      50      83 .. 0.86
   2 ?    1.8   0.0       0.3   1.6e+02     105     139 .]     134     170 ..      91     170 .. 0.74

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 1.1e-07
                 EEEEE------HHHHHHHGGGGBS--EEE CS
    PF07728.9  1 dvlLvGppGtgKselaerlaealnrevey 29
                 ++lL GppGtgK+++a+rla+a +  +  
  MMETSP1325-20131115|10696_1 50 HLLLYGPPGTGKTMVAQRLARASGMDYAL 78
                 79*******************98766655 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.3
                  ---..............-EEEEE-SS--.-TT-TTHHHHTT- CS
    PF07728.9 105 akndd.llek......nfrviatanpldrslnelspalrsRf 139
                   + +  l  +      nf+ + ++n+++    +l++a+++R+
  MMETSP1325-20131115|10696_1 134 NALNAlLY-QtgtqsyNFMMVLATNRAE----DLDSAVIDRM 170
                  23323222.2456667999999999999....9999999997 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   2.1e-07   0.00012       9      53 ..      31      78 ..      26     154 .. 0.68

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 2.1e-07
    PF13191.1  9 leaLlaalrrvsegsp...lllvtGpsGiGKSsLlrelakpillerlr 53
                 +++L+   r++++ +     ll++Gp+G+GK+ ++++la++   + ++
  MMETSP1325-20131115|10696_1 31 VQQLAVSTRNARRNRVpfrHLLLYGPPGTGKTMVAQRLARASGMDYAL 78
                 56777777776666667889*****************77765444444 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   3.3e-07   0.00018      23      43 ..      49      69 ..      36      72 .. 0.92
   2 ?   -2.4   0.0       3.5   1.9e+03     109     134 ..     110     136 ..     105     160 .. 0.46

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 3.3e-07
   PF01078.16 23 HnlllvGppGsGKtmlakrlp 43
                  +lll+GppG+GKtm+a+rl+
  MMETSP1325-20131115|10696_1 49 RHLLLYGPPGTGKTMVAQRLA 69
                 589****************96 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 3.5
   PF01078.16 109 vLfLDElpef.krkvleaLRePledge 134
                  +Lf+DE+  f  ++   a+ e l +  
  MMETSP1325-20131115|10696_1 110 LLFIDEAEAFlGSRSKTAMSEELRNAL 136
                  468888877731222233333333333 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.2e-06   0.00065       3      32 ..      52      83 ..      51     222 .. 0.76

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.2e-06
                 --B--TT---HHHHHHHHHHSTEEE..EEGGG CS
    PF13207.1  3 aitGppGsGKsTlakeLaerlglpv..lsldd 32
                 +++GppG+GK+ +a++La++ g+++   s +d
  MMETSP1325-20131115|10696_1 52 LLYGPPGTGKTMVAQRLARASGMDYalMSGGD 83
                 689****************9888874345555 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.3e-06    0.0023       3      33 ..      52     112 ..      50     177 .. 0.60

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 4.3e-06
    PF13671.1   3 llvGlpGsGKstlaerllkklg..yvrlsqdt............................l 33 
                  ll G+pG+GK+ +a+rl+++ g  y ++s  +                            +
  MMETSP1325-20131115|10696_1  52 LLYGPPGTGKTMVAQRLARASGmdYALMSGGDvgplgkdavtelhalfrwakgsskglllF 112
                  789*****************99876666655546666666665555444444444444441 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   6.5e-06    0.0036      12      34 ..      46      71 ..      34      84 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 6.5e-06
    PF13245.1 12 l....lvvtGgPGtGKTttlaaiiaal 34
                 +    l++ G+PGtGKT  +a++ a++
  MMETSP1325-20131115|10696_1 46 VpfrhLLLYGPPGTGKT-MVAQRLARA 71
                 455557889********.999998876 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00012     0.067       2      23 ..      50      71 ..      49      76 .. 0.89
   2 ?   -1.8   0.0       3.4   1.9e+03      83     132 ..     109     158 ..     104     175 .. 0.68
   3 ?    2.5   0.0      0.16        87      99     161 ..     204     263 ..     169     269 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00012
    PF05729.7  2 tvilqGeaGsGKTtLlqklasa 23
                  ++l G++G GKT+ +q+la+a
  MMETSP1325-20131115|10696_1 50 HLLLYGPPGTGKTMVAQRLARA 71
                 6799***************976 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 3.4
    PF05729.7  83 lLlilDglDelvsdlgqlkekqpvrtlLselirkkllpeasllltvrpda 132
                  lLl++D ++ +    ++ +  +++r+ L+ l+ ++  ++  +++ + +++
  MMETSP1325-20131115|10696_1 109 LLLFIDEAEAFLGSRSKTAMSEELRNALNALLYQTGTQSYNFMMVLATNR 158
                  68888888888777777667777777777777766555555554444444 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.16
    PF05729.7  99 q...lkekqpvrtlLselirkkllpeasllltvrpdalrdleeqleeaivlevegfseerrkqlvr 161
                      l++ ++v +lL++l+      +a++++++ + +   +++ le+     vegfs  ++ +l+ 
  MMETSP1325-20131115|10696_1 204 RtkeLMKVNAVLRLLKKLFVS---VSAPIKISAASAKA--IPKHLEQV-ADLVEGFSGREISKLMI 263
                  233467788888999999888...78889998888887..88888888.77799999999988875 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   7.9e-05     0.043      36      56 ..      51      71 ..      43      91 .. 0.87
   2 ?    1.4   0.0       0.3   1.6e+02     126     178 ..      92     142 ..      75     161 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 7.9e-05
    PF13481.1 36 tllaGapgtGKStlalqlaaa 56
                 +ll+G+pgtGK+++a+ la a
  MMETSP1325-20131115|10696_1 51 LLLYGPPGTGKTMVAQRLARA 71
                 69**************99975 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.3
    PF13481.1 126 ltadlerllaaieelegpdlvviDtlsrlvggdensnsdv.gaviaalerlakr 178
                  + ++l++l ++++   +  l+ iD + +++g+   s +++ +++ +al++l  +
  MMETSP1325-20131115|10696_1  92 V-TELHALFRWAKGSSKGLLLFIDEAEAFLGS--RSKTAMsEELRNALNALLYQ 142
                  3.46899999999999999***********96..44444445666666666544 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.9e-05      0.01       5     105 ..      51     153 ..      48     180 .. 0.66

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.9e-05
    PF13173.1   5 lvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe.llelfleklke..kkkylflDEiqev..........pewedalkslvddgrnldviltGsnskllske 105
                  l+++Gp ++GKt+++++la+      ++  ++  d   + +++ + l+ lf+   k+  k  +lf+DE+             +e+++al+ l+        + tG +s+  +  
  MMETSP1325-20131115|10696_1  51 LLLYGPPGTGKTMVAQRLARASG--MDYALMSGGDVGPLGKDAVTeLHALFRWA-KGssKGLLLFIDEAEAFlgsrsktamsEELRNALNALL--------YQTGTQSYNFMMV 153
                  789****************9999..99999999998887766554355555554.33447888*******99886655555555555555555........4444444443333 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.2e-05     0.012       1     110 [.      50     157 ..      50     173 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.2e-05
    PF07726.6   1 hvllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevyeekekefefkkGpvfanllladeinra.ppktqsalleameerqvtvegethklpepfl.vlatq 110
                  h+ll g PG++kt++++ la+a ++++  +    d+ P   lG + ++e ++ f+  kG     ll+ de      +++++a+ e +++   ++  +t + + +f+ vlat+
  MMETSP1325-20131115|10696_1  50 HLLLYGPPGTGKTMVAQRLARASGMDYALM-SGGDVGP---LGKDAVTELHALFRWAKGSSKGLLLFIDEAEAFlGSRSKTAMSEELRNALNALLYQTGTQSYNFMmVLATN 157
                  99************************9855.5678777...78888888889999999998888888898876425788888888888877777666666666554155554 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   0.00013      0.07       3      24 ..      52      74 ..      50      85 .. 0.84
   2 ?    0.2   0.0         1   5.6e+02      57      83 ..     443     469 ..     420     476 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 0.00013
    PF13521.1  3 vitGgpstGKTtlleaLaar.gy 24
                  + G+p+tGKT ++++La+  g+
  MMETSP1325-20131115|10696_1 52 LLYGPPGTGKTMVAQRLARAsGM 74
                 589***************76555 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 1
    PF13521.1  57 eavleaqleqeaaaaaskllfcDrgll 83 
                  + vlea+l++++ a +++++f Dr + 
  MMETSP1325-20131115|10696_1 443 KXVLEANLAEAQVAGSGRVYFQDRVYA 469
                  67899999999999*********9765 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   3.5e-05     0.019       2      23 ..      52      81 ..      51     157 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3.5e-05
    PF13238.1  2 litGtpGvGKtTlakeLaerl........g 23
                 l+ G+pG+GKt +a++La+          g
  MMETSP1325-20131115|10696_1 52 LLYGPPGTGKTMVAQRLARASgmdyalmsG 81
                 588**************9874333444440 PP

>> PF05707.7  Zonular occludens toxin (Zot)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.11        59       4      17 ..      52      65 ..      51      84 .. 0.82
   2 !    9.8   0.0   0.00081      0.44      67     109 ..      94     136 ..      82     173 .. 0.74

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.11
    PF05707.7  4 lvtGkpGsGKtlea 17
                 l +G pG+GKt++a
  MMETSP1325-20131115|10696_1 52 LLYGPPGTGKTMVA 65
                 689********998 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00081
    PF05707.7  67 lekyldkwrtld.kgallviDEcqqifpvragegkkvpevl.eaf 109
                    ++l++w++   kg ll+iDE+  +  +r++  + + e l +a+
  MMETSP1325-20131115|10696_1  94 ELHALFRWAKGSsKGLLLFIDEAEAFLGSRSKT-A-MSEELrNAL 136
                  5678999999667******************96.3.433332444 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0094       5.1       3      24 ..      50      71 ..      48      86 .. 0.84
   2 ?    6.4   0.0    0.0075       4.1     246     313 ..     109     180 ..      88     191 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0094
    PF12846.2  3 ntlilGppGsGKSvllkklvlq 24
                 + l++GppG GK++ + +l+++
  MMETSP1325-20131115|10696_1 50 HLLLYGPPGTGKTMVAQRLARA 71
                 899*************999765 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.0075
    PF12846.2 246 kllviDEahrllgs.......pegadfldelareg..RkfgvgiilatQslsdlppsekakgilnnsttkiilrqdd 313
                   ll+iDEa  +lgs       +e++++l++l+ +    +++  ++lat   +dl++      ++++++  +++ ++ 
  MMETSP1325-20131115|10696_1 109 LLLFIDEAEAFLGSrsktamsEELRNALNALLYQTgtQSYNFMMVLATNRAEDLDSA-----VIDRMDESLLFPLPT 180
                  689*********9988777766667777776555424699*****************.....999988777777766 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   0.00011     0.061       2      21 ..      52      71 ..      51      87 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 0.00011
   PF00910.17  2 wlyGpsgeGKStlakeLaka 21
                 +lyGp+g+GK+++a++La+a
  MMETSP1325-20131115|10696_1 52 LLYGPPGTGKTMVAQRLARA 71
                 79***************987 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00011     0.059       6      25 ..      51      70 ..      49      75 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 0.00011
    PF13479.1  6 vliYGkpGiGKTslaktlpk 25
                 +l+YG+pG+GKT +a +l +
  MMETSP1325-20131115|10696_1 51 LLLYGPPGTGKTMVAQRLAR 70
                 689***********998855 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00019       0.1      22      49 ..      48      75 ..      27     184 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00019
                 -S-EEEE-------HHHHHHHHHTSTTT CS
   PF00158.21 22 dltvlitGesGtGKellAraiheaskrk 49
                   ++l+ G  GtGK+++A+ + +as  +
  MMETSP1325-20131115|10696_1 48 FRHLLLYGPPGTGKTMVAQRLARASGMD 75
                 3789****************99887655 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00018     0.099      44      88 ..      42      84 ..      31     102 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00018
    PF06068.8 44 kekklaGravLlaGppgtGktalaiaiskelgedvpfvalsgsev 88
                 + +++  r +Ll GppgtGkt +a  ++++ g  + ++ +sg++v
  MMETSP1325-20131115|10696_1 42 RRNRVPFRHLLLYGPPGTGKTMVAQRLARASG--MDYALMSGGDV 84
                 677888899*******************9877..66777777766 PP

>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00027      0.15     116     138 ..      50      72 ..      32      79 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00027
   PF01057.12 116 tvwfyGpantGktnlaeaIakav 138
                   +++yGp+ tGkt++a+ +a+a+
  MMETSP1325-20131115|10696_1  50 HLLLYGPPGTGKTMVAQRLARAS 72 
                  45677**************9986 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00034      0.19      50      70 ..      51      71 ..      46      76 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00034
   PF01695.12 50 lvllGpsGvGKthlAialgve 70
                 l+l Gp+G+GKt +A  l+ +
  MMETSP1325-20131115|10696_1 51 LLLYGPPGTGKTMVAQRLARA 71
                 89*************998865 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.034        19      19      40 ..      47      68 ..      40      80 .. 0.81
   2 ?    4.7   0.0     0.035        19     100     152 ..      89     140 ..      76     156 .. 0.85
   3 ?   -3.2   0.0       8.9   4.9e+03     125     147 ..     201     224 ..     189     250 .. 0.63

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.034
                 .-SEEEEE--TT---HHHHHHH CS
   PF01637.13 19 pnsiiviyGprrsGKTaLlkei 40
                 p + +++yGp ++GKT + +++
  MMETSP1325-20131115|10696_1 47 PFRHLLLYGPPGTGKTMVAQRL 68
                 566789**********887665 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.035
                  GG.G--HHHHHHHHHH----EEEEEETGGGGG-------HHHHHHHHHHHH.. CS
   PF01637.13 100 klvflaleellealkkkgkkiiiiiDElqklilglngakslvkeLlnlidslt 152
                  k++   l  l++  k + k +++ iDE+  +  g+++++++ +eL n+++ l+
  MMETSP1325-20131115|10696_1  89 KDAVTELHALFRWAKGSSKGLLLFIDEAEAFL-GSRSKTAMSEELRNALNALL 140
                  67778888999999999999*********999.99*9********99988754 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 8.9
                  ETGGGGG.-------HHHHHHHHH CS
   PF01637.13 125 DElqkli.lglngakslvkeLlnl 147
                  DE+ +   +++n   +l+k+L+  
  MMETSP1325-20131115|10696_1 201 DEARTKElMKVNAVLRLLKKLFVS 224
                  444444444555555555555443 PP

>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00021      0.11      19      79 ..      52     269 ..      49     456 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00021
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................................................................................................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00006.20  19 lipGafgcGktvisqslsknsnsdaiiyvg.............................................................................................................................................................iGergnevaevleefrkepimkrttlvants 79 
                  l+ G++g+Gkt+++q+l++ s  d   + g                                                                                                                                                             i ++ ++va+++e f++++i k ++ v + +
  MMETSP1325-20131115|10696_1  52 LLYGPPGTGKTMVAQRLARASGMDYALMSGgdvgplgkdavtelhalfrwakgsskglllfideaeaflgsrsktamseelrnalnallyqtgtqsynfmmvlatnraedldsavidrmdesllfplptldlrgrltkiyfdayvtnhtdeartkelmkvnavlrllkklfvsvsapikisaasakaIPKHLEQVADLVEGFSGREISKLMIAVQSAA 269
                  789******************99999887779999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999998888888888888888888877755554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        74  (0.00541252); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.99u 0.40s 00:00:01.39 Elapsed: 00:00:00.60
# Mc/sec: 1965.01
//
Query:       MMETSP1325-20131115|10697_1  [L=286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-15   56.6   0.0    2.6e-15   56.0   0.0    1.2  1  PF00787.19 PX domain


Domain annotation for each model (and alignments):
>> PF00787.19  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   1.9e-19   2.6e-15      16     111 ..      33     133 ..      23     135 .. 0.91

  Alignments for each domain:
  == domain 1    score: 56.0 bits;  conditional E-value: 1.9e-19
                  CETSSEEEEEEEECS-...SCEEEEEEEHHHHHHHHHHHHHHTT..TSTSTS--TTSSSHHCGTTSHHHHHHHHHHHHHHHHHHHHSCHHHH...SHHHHHHHH CS
   PF00787.19  16 skkhsyylievelktg...akewtvkRrYsdFeeLhskLlrkfp..rlklPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrk...sevltsFLe 111
                  +  ++ y+ +++++t+   ak w v Rr+++F+ L   L++ fp  + klP lP+k+ fgs     +e +++r+++Le+y++ +l+ + l+    s+ l +FL 
  MMETSP1325-20131115|10697_1  33 GQTYTEYILRCTWGTSietAKPWMVARRFREFYALDAILRDAFPplGDKLPALPSKSMFGS---LAPETVKSRQQQLERYMTTILSSEGLSAivkSPQLDEFLM 133
                  5678899999999999********************************************9...9********************9987777766999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.50
# Mc/sec: 1370.72
//
Query:       MMETSP1325-20131115|10699_1  [L=165]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-06   26.1  19.2    3.7e-06   26.1  13.3    1.4  2  PF01061.19 ABC-2 type transporter
  ------ inclusion threshold ------
        3.5    7.5  11.8        3.7    7.4   0.3    2.7  2  PF13564.1  DoxX-like family


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1  13.3   5.4e-10   3.7e-06     103     206 ..       2     106 ..       1     109 [. 0.94
   2 ?   -3.5   0.1       0.6   4.1e+03      30      39 ..     138     147 ..     130     156 .. 0.54

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 5.4e-10
   PF01061.19 103 velpvsllqaiifllivyflvgldls.fflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsmpkwlqwiyylnPltyavealrs 206
                  +elpv++++ ++fll+ + lvgl+ s +  ++ ++++ a+++ s++ ++ +l  + + +++++ ++++ ++  +G+fi++   p ++ w  y ++ +y++ ++ s
  MMETSP1325-20131115|10699_1   2 CELPVQMVMPAVFLLLLWALVGLPFSiLPAIYAITIANAWVSASISTMFMCLIFDGDLVMKILIVVFVYCMSAGGFFINMAEQPAFIGWCRYTSYWYYSLGLYTS 106
                  699**********************97567799**************************************************98999*********99877765 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 0.6
   PF01061.19  30 llmalvfgtv 39 
                  +l++l +g+v
  MMETSP1325-20131115|10699_1 138 MLVLLGYGFV 147
                  4444444444 PP

>> PF13564.1  DoxX-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   3.8     0.012        84      53      99 ..       9      53 ..       4      55 .. 0.74
   2 ?    7.4   0.3   0.00054       3.7       5      49 ..      65     109 ..      60     111 .. 0.86

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.012
    PF13564.1 53 llplvtaprlkplAavglvllmlgAiathlrvgdpkavalpavllal 99
                 ++p+  +  l ++A vgl + +l Ai++ + ++ +  + ++ +++ l
  MMETSP1325-20131115|10699_1  9 VMPA--VFLLLLWALVGLPFSILPAIYAITIANAWVSASISTMFMCL 53
                 4442..34578899999999999999999999999777777777666 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.00054
    PF13564.1   5 llalfflaagvakllkpeevvaafaqlgfpssfvrllGvvellGa 49 
                  ++++++ +++++ +++  e+ a++ +  + s++ + lG+   +++
  MMETSP1325-20131115|10699_1  65 IVVFVYCMSAGGFFINMAEQPAFIGWCRYTSYWYYSLGLYTSVAV 109
                  566778899999999***********************9877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       700  (0.0511995); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 841.27
//
Query:       MMETSP1325-20131115|10702_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   10.3   1.5       0.17   10.4   1.1    1.0  1  PF10254.4 PACS-1 cytosolic sorting protein


Domain annotation for each model (and alignments):
>> PF10254.4  PACS-1 cytosolic sorting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.1   1.2e-05      0.17     216     257 ..      16      59 ..       2      63 .] 0.72

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 1.2e-05
    PF10254.4 216 s..DlddaaalsasvlsssPpqesslskeasasPPpspslqssl 257
                  +  D   a      v++ sPp e+ +  +++++PP s++ +ss 
  MMETSP1325-20131115|10702_1  16 EmiDHFKASHRCMGVPTQSPPGEEDARPDTGPTPPVSSTDSSSA 59 
                  234555555566899********************998877644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|10701_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0071   15.8   2.3      0.011   15.2   1.6    1.2  1  PF00455.17 DeoR C terminal sensor domain
  ------ inclusion threshold ------
      0.088   12.5   3.7       0.13   11.9   2.6    1.3  1  PF14014.1  Protein of unknown function (DUF4230)


Domain annotation for each model (and alignments):
>> PF00455.17  DeoR C terminal sensor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   1.6   1.6e-06     0.011      76     131 ..     165     219 ..     161     225 .. 0.91

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.6e-06
   PF00455.17  76 kseslvgplaeealrqfnvdkaflgasGidaegglttsdeeeaevkralierarrv 131
                  +++++v + +e+ ++ +++ ka+++ ++i+a +++ +++e+ a+ ++a++e+a++ 
  MMETSP1325-20131115|10701_1 165 AEHGVVHQPTEDEIAAYEAAKALMSQEAIKA-RAAQEAEEKAARQAKAMMEAAQQA 219
                  567889999*********************7.6********************986 PP

>> PF14014.1  Protein of unknown function (DUF4230)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.6     2e-05      0.13      88     149 ..     157     218 ..     143     228 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2e-05
    PF14014.1  88 kkikvy.deksgllnriepedlaeaqkeakekvekaalesglleqAeknakkaleqllkslgf 149
                  k+++v  + + g++ +  +ed+ +a++ ak+ + ++a +    ++Ae++a+++ ++++++++ 
  MMETSP1325-20131115|10701_1 157 KSVYVAaSAEHGVVHQ-PTEDEIAAYEAAKALMSQEAIKARAAQEAEEKAARQAKAMMEAAQQ 218
                  4555553455556666.5679999999999999999999999999999999999999988443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1564  (0.114394); expected 273.4 (0.02)
Passed bias filter:                      587  (0.0429345); expected 273.4 (0.02)
Passed Vit filter:                        68  (0.00497367); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.36s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|10703_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0012   17.0   0.0     0.0015   16.7   0.0    1.0  1  PF06215.6 Infectious salmon anaemia virus haemagglutinin


Domain annotation for each model (and alignments):
>> PF06215.6  Infectious salmon anaemia virus haemagglutinin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   1.1e-07    0.0015      27     104 ..      55     135 ..      48     144 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 1.1e-07
    PF06215.6  27 twigdsrsdqsrvnpqsldlvtefkgvlqakngngllk..qmsgrfpsdwytpttkyrilylg.tndctdgptdviiptsm 104
                   +i  +r d s + +++l l  e+ g+ + + gn l++  ++s r     ++   +++ily+  t  c+  p+ +  p+ +
  MMETSP1325-20131115|10703_1  55 VFINRARCDLSDMSHDALALAYELDGLQRLQPGNCLIRhrRVSQRAHNHNHQHQQQHQILYMYtTTTCATAPAALANPAVL 135
                  689999******************************9633699******************9615789999*999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       470  (0.0343768); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 686.65
//
Query:       MMETSP1325-20131115|10705_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-22   79.0   0.0    2.1e-22   78.8   0.0    1.1  1  PF00254.23 FKBP-type peptidyl-prolyl cis-trans isomerase


Domain annotation for each model (and alignments):
>> PF00254.23  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.0   1.5e-26   2.1e-22      21      93 ..       4      82 ..       1      83 [. 0.93

  Alignments for each domain:
  == domain 1    score: 78.8 bits;  conditional E-value: 1.5e-26
                 ---EEEETTTTTCEEEEECCTTSS-HHHHHHHTTSBCTEEEEEEEEGGGT-S-TTCCTTT......S.TT-EEEEEEEE CS
   PF00254.23 21 dgtvfdssysrakpfefkvGsgqvikgleeglegmkvGekrtltippelaYgekglaggk......ippnatlvfevel 93
                 dg++fdss +r++p+++ +Gsgq i+gl+egl+gm+vG++r++ i+pelaYg+ g+  +       ip ++tl f+v l
  MMETSP1325-20131115|10705_1  4 DGKKFDSSLDRNTPLSLVLGSGQAIPGLDEGLTGMRVGGTRRFVIKPELAYGSDGYPRSGdakgsmIPGGSTLYFQVRL 82
                 89***************************************************8885555888889***********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 421.58
//
Query:       MMETSP1325-20131115|10706_1  [L=305]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-20   71.6   0.0      1e-19   70.9   0.0    1.4  1  PF00005.22 ABC transporter
    2.7e-05   23.4   0.0     0.0012   18.0   0.0    2.1  2  PF02463.14 RecF/RecN/SMC N terminal domain
    0.00013   21.9   0.0       0.26   11.1   0.0    2.1  2  PF13304.1  AAA domain
     0.0021   17.5   0.6       0.58    9.6   0.0    2.4  3  PF13604.1  AAA domain
  ------ inclusion threshold ------
       0.01   15.5   0.0      0.018   14.7   0.0    1.3  1  PF01935.12 Domain of unknown function DUF87
      0.032   14.1   0.0      0.068   13.0   0.0    1.5  1  PF01926.18 50S ribosome-binding GTPase
      0.058   13.7   0.1       0.12   12.8   0.1    1.5  1  PF08477.8  Miro-like protein
      0.083   12.3   0.1       0.19   11.1   0.0    1.6  1  PF13555.1  P-loop containing region of AAA domain
      0.095   11.6   0.0       0.21   10.5   0.0    1.5  1  PF06414.7  Zeta toxin


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   0.0   6.6e-23     1e-19       1     118 []      95     219 ..      95     219 .. 0.93

  Alignments for each domain:
  == domain 1    score: 70.9 bits;  conditional E-value: 6.6e-23
                  HHHHHHHTTSS------EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--..........----------HHHHHHHHHHTT--SEEEEESTTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00005.22   1 STLlklltgelkptegeievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk..........srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                  S+Ll +l+++++p  g++++d+   d ++  le+lr  i+ ipqdp lf   tvr nld++ +   td+++ ++le+  l+e + +          + ++++S G++q ++l rall+++k+llLDE+t+
  MMETSP1325-20131115|10706_1  95 SSLLLVLLRLVEPAGGDVQIDG--VDARRLGLEDLRshISIIPQDPVLF-TGTVRFNLDPFANH--TDAEVWHALERAHLSECIGSkpdkleaeveEAGRNFSMGERQLLCLGRALLRRSKILLLDEATS 219
                  89*******************4..45667778888888***********.**********9998..9***************77767*****************************************96 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.023        35      27      41 ..      84      98 ..      74     103 .. 0.82
   2 !   18.0   0.0   7.6e-07    0.0012     112     209 ..     113     259 ..      99     264 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.4 bits;  conditional E-value: 0.023
                 EEE--------HHHH CS
                 xxxxxxxxxxxxxxx RF
   PF02463.14 27 taivGpNGSGKsnvl 41
                   +vG+ G+GKs++l
  MMETSP1325-20131115|10706_1 84 VGVVGRTGAGKSSLL 98
                 569*********997 PP

  == domain 2    score: 18.0 bits;  conditional E-value: 7.6e-07
                  EE---EE-HHHHHHHHHCTT--TT.....................................................G-----HHHHHHHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT-SEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxx.....................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF02463.14 112 kingkevtkkevaellesagiske.....................................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemlekadklv 209
                  +i+g ++++  +++l ++  i ++                                                     ++S Ge++L+ l         +++ + llDe  +a D +  ++v + ++++ k++ ++ i++r +++ + d+++
  MMETSP1325-20131115|10706_1 113 QIDGVDARRLGLEDLRSHISIIPQdpvlftgtvrfnldpfanhtdaevwhalerahlsecigskpdkleaeveeagrNFSMGERQLLCLG----RALLRRSKILLLDEATSAVDSQTDNLVQDTIRTEFKHCTVLTIAHRLDTIIDYDRVL 259
                  566666666666666666555555666666666666666666666666666666666666888888888888888889999999997653....334688899*************************************99998888765 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00017      0.26       4      50 ..      86     143 ..      84     156 .. 0.82
   2 !    8.9   0.0   0.00077       1.2     235     268 ..     189     219 ..     167     241 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00017
    PF13304.1   4 iiGpNgsGKSnlLkaldflfr...........delvlglnldrslnvniekipfllde 50 
                  ++G+ g+GKS+lL +l  l +           d ++lgl + rs+ + i+ +p l+++
  MMETSP1325-20131115|10706_1  86 VVGRTGAGKSSLLLVLLRLVEpaggdvqidgvDARRLGLEDLRSHISIIPQDPVLFTG 143
                  79*****************999999888888877777777777777777777777665 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.00077
    PF13304.1 235 sdlSdGtkrllalltallsalekgsvlliDEpEn 268
                  +++S G+++ll l  all++    ++ll+DE  +
  MMETSP1325-20131115|10706_1 189 RNFSMGERQLLCLGRALLRRS---KILLLDEATS 219
                  456******************...*******765 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00038      0.58      15      49 ..      78     112 ..      73     130 .. 0.84
   2 !    5.9   0.0    0.0049       7.5      67     120 ..     174     235 ..     157     242 .. 0.72
   3 ?   -4.0   0.0       5.4   8.2e+03     137     150 ..     278     291 ..     276     292 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00038
    PF13604.1  15 tsgdrvavvqGpAGtGKttvlkalrealeaagkrv 49 
                   ++++ + v+G+ G+GK+++l  l +++e ag  v
  MMETSP1325-20131115|10706_1  78 VTPEQKVGVVGRTGAGKSSLLLVLLRLVEPAGGDV 112
                  4555666777**************99999999877 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0049
    PF13604.1  67 giearTiasllerldkeeaegrke........ldaktllvvDEAgmvdtrqlarlleaaeka 120
                  g + + +++ +e+ +++ + g+++        l++ ++l++DEA+ +   q+++l++ + ++
  MMETSP1325-20131115|10706_1 174 GSKPDKLEAEVEEAGRNFSMGERQllclgralLRRSKILLLDEATSAVDSQTDNLVQDTIRT 235
                  5555555555555555555555557777777799999***************9999876655 PP

  == domain 3    score: -4.0 bits;  conditional E-value: 5.4
    PF13604.1 137 eaGgvfrllaeegg 150
                  ++Gg+fr++ e+++
  MMETSP1325-20131115|10706_1 278 KEGGMFRAMWEAHQ 291
                  46999999998876 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.2e-05     0.018      21      45 ..      79     103 ..      67     112 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.2e-05
   PF01935.12  21 lvtrHlAilgsTGsGKSntvavLle 45 
                    ++ ++++g+TG+GKS +  vLl+
  MMETSP1325-20131115|10706_1  79 TPEQKVGVVGRTGAGKSSLLLVLLR 103
                  557889****************997 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   4.5e-05     0.068       1      20 [.      83     102 ..      83     118 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 4.5e-05
                  EEEEE--TT---HHHHHHHH CS
   PF01926.18   1 evaivGrpNvGKStLinaLt 20 
                  +v++vGr+ +GKS+L+  L+
  MMETSP1325-20131115|10706_1  83 KVGVVGRTGAGKSSLLLVLL 102
                  69*************98887 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   7.6e-05      0.12       1      21 [.      83     103 ..      83     118 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 7.6e-05
    PF08477.8   1 kvvvvGdkgvGKssllsqlvg 21 
                  kv vvG +g+GKssll  l++
  MMETSP1325-20131115|10706_1  83 KVGVVGRTGAGKSSLLLVLLR 103
                  89*************977665 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00013      0.19      18      40 ..      77      98 ..      70     112 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00013
    PF13555.1 18 eidpkgkntlltGasGsGKSTll 40
                  + p++ ++ ++G++G+GKS+ll
  MMETSP1325-20131115|10706_1 77 AVTPEQ-KVGVVGRTGAGKSSLL 98
                 555554.7889**********98 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00014      0.21      21      54 ..      86     120 ..      77     139 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00014
    PF06414.7  21 lgGqpGAGKtslaellleela.agnivridaDelr 54 
                  ++G +GAGK+sl+  ll+ ++ ag+ v+id+ + r
  MMETSP1325-20131115|10706_1  86 VVGRTGAGKSSLLLVLLRLVEpAGGDVQIDGVDAR 120
                  79****************99999999999986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.64u 0.33s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1405.56
//
Query:       MMETSP1325-20131115|10707_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-27   95.4   2.2    4.4e-27   95.2   1.5    1.1  1  PF02156.10 Glycosyl hydrolase family 26


Domain annotation for each model (and alignments):
>> PF02156.10  Glycosyl hydrolase family 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.2   1.5   3.2e-31   4.4e-27     134     264 ..       2     147 ..       1     205 [. 0.74

  Alignments for each domain:
  == domain 1    score: 95.2 bits;  conditional E-value: 3.2e-31
                  HHHHHHHHHHHCHCT--..--EEEE-S-S-----S-----STCHHHHHHHHHHHHHHHHHCT----SEEEE---BTT.S...S-TCCC-----S-SEE-EE---S....-GCC-HHHHHHHHCT-CHCCCCCCHH......H---EE CS
   PF02156.10 134 rdldkiaeqlkkLqneg..vpvlfRplHEanGeWFWWGakgyerpeaykklwkllyerlvdtrglnnliwvyspdns.r...dvaeafyPgdeyvDivglDiYae....daassadaynelvalkkakklvelte......anGsip 264
                  +dld i ++lk +  +g  +p++fR +HE++G+W+WW     ++ + y+ +w +   +l+dt g++nl+++y+  +  +   ++  ++yPg++ vDivg+D Y++     a+  +d  + + +  k  k+v+l+e       +G ++
  MMETSP1325-20131115|10707_1   2 ADLDTIGNGLKSFTYKGqpIPIVFRFFHEMTGSWYWWSSG-CSNSSDYAPAWNYTISYLRDTVGVHNLLYIYAASKVsWyanETFVDWYPGNSLVDIVGFDRYQNvaeyPASVLSDCQTAVAHGIKLGKVVALAEtgismgIQGILN 147
                  689********99877777******************987.599****************************9876424221444578****************9754333444554444444455566777777333433344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.32s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 1281.77
//
Query:       MMETSP1325-20131115|10709_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|10711_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 594.30
//
Query:       MMETSP1325-20131115|10712_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      471  (0.03445); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|10713_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|10715_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   14.9   0.0      0.015   14.8   0.0    1.1  1  PF12799.2 Leucine Rich repeats (2 copies)
      0.038   13.9   0.0      0.069   13.1   0.0    1.5  1  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   2.1e-06     0.015      20      38 ..       7      25 ..       2      36 .. 0.78

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 2.1e-06
    PF12799.2 20 lanLpnLktLnLsnNpisd 38
                 la   + k+L+L+nN i+d
  MMETSP1325-20131115|10715_1  7 LAENHSVKSLWLQNNEITD 25
                 7777888999999999998 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     1e-05     0.069       2      20 ..      11      29 ..      10      37 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1e-05
    PF13516.1  2 knLtsLdLsnNqigdeGls 20
                  + +sL L+nN i+d G+ 
  MMETSP1325-20131115|10715_1 11 HSVKSLWLQNNEITDAGAH 29
                 6789*************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|10714_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-05   25.2   0.0    3.7e-05   23.7   0.0    1.8  2  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.37     5e+03       3      21 ..      12      30 ..      10      38 .. 0.66
   2 !   23.7   0.0   2.7e-09   3.7e-05       3     102 ..      90     190 ..      88     192 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.37
                 BEEEEEEEETSSSCEEEEE CS
   PF00169.24  3 keGyllkksellktwkkry 21
                 k+G+l+ + ++  +++++ 
  MMETSP1325-20131115|10714_1 12 KKGFLSSMDSSVNSKQRFQ 30
                 7888888885555555544 PP

  == domain 2    score: 23.7 bits;  conditional E-value: 2.7e-09
                  BEEEEEEEE......TSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECG.....GEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHH CS
   PF00169.24   3 keGyllkks......ellktwkkryfvLtsnyLlyfksskkksykapkgsipln.....dctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalknl 102
                  k G+l k +        + +  +r+f+L+++ L yfk++    ++ pkg i+l+       ++++++s       ++  +f + f+ +   l++++++ e+ +Wv+++ n+
  MMETSP1325-20131115|10714_1  90 KTGFLAKHKlqsneaAEKDSDVPRFFILQGGMLRYFKNEA---DEFPKGQISLTpnaaaAREIEIDTSA-----RPHFTVFSVEFPRG--MLIKCSTNNEMDQWVTSITNI 190
                  67888888888888888888899****************9...8********97333222355555554.....45666777777777..******************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 944.72
//
Query:       MMETSP1325-20131115|10717_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 356.90
//
Query:       MMETSP1325-20131115|10718_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.6   0.3       0.11   12.6   0.2    1.1  1  PF11667.3 Protein of unknown function (DUF3267)


Domain annotation for each model (and alignments):
>> PF11667.3  Protein of unknown function (DUF3267)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   7.7e-06      0.11      36      72 ..      32      69 ..      18      70 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7.7e-06
    PF11667.3 36 llfyat.tktplskkrfliillaPfivlsillliilll 72
                 +++ ++  +++ ++ r l+++++P++ ++++l++i+ll
  MMETSP1325-20131115|10718_1 32 VPLSCLgNQRFGHMERLLVSTILPLVTVGLALFVITLL 69
                 555555567777899*******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|10722_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        89  (0.00650965); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 356.90
//
Query:       MMETSP1325-20131115|10722_2  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|10721_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.092   12.7   0.1       0.27   11.2   0.1    1.7  2  PF04837.7 MbeB-like, N-term conserved region


Domain annotation for each model (and alignments):
>> PF04837.7  MbeB-like, N-term conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.63   8.6e+03      20      33 ..      52      65 ..      47      68 .. 0.71
   2 ?   11.2   0.1     2e-05      0.27      14      44 ..     104     134 ..     102     136 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 0.63
    PF04837.7 20 eSteemvksafekh 33
                 + ++ +v ++f++ 
  MMETSP1325-20131115|10721_1 52 KQVTDAVYADFKRF 65
                 55677888888876 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 2e-05
    PF04837.7  14 kskeqaeSteemvksafekheksvkeaLkes 44 
                  ++k   eS +  v++++ +h +++k+aL+++
  MMETSP1325-20131115|10721_1 104 QLKGVRESLQSEVRLDLDRHSADLKQALEDA 134
                  6677789*********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 1000.83
//
Query:       MMETSP1325-20131115|10719_1  [L=397]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-93  312.6   0.6    3.1e-93  312.0   0.4    1.2  1  PF00224.16 Pyruvate kinase, barrel domain
    3.2e-22   78.1   0.3    9.1e-22   76.7   0.1    1.8  2  PF02887.11 Pyruvate kinase, alpha/beta domain
      1e-06   27.6   0.6    6.9e-06   24.9   0.1    2.2  2  PF03328.9  HpcH/HpaI aldolase/citrate lyase family


Domain annotation for each model (and alignments):
>> PF00224.16  Pyruvate kinase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  312.0   0.4   6.8e-97   3.1e-93     119     340 ..       3     235 ..       1     242 [. 0.92

  Alignments for each domain:
  == domain 1    score: 312.0 bits;  conditional E-value: 6.8e-97
                  HS----EEEE----EEEEEEE----E..EEEEEEE---B------B---------SS-HHHHHHHH---TT--SEEEETTE-SHHHHHH....HHHH-----.--SE.....EEEEE-S----TTHHHHHHH----EEE-------S-CCCHHHHHHHH---TTT-----EEESSTTGGGGTSSS--CHHHHHHHHHHH----EEEE---------HHHHHHHHHHHHHHHHH CS
   PF00224.16 119 dvevGktilvdDGvlslkvlevddek.elkvevenegvlssrkgvnlpgtkvdlpalsekDkadlkfgvkqgvdliaasfvRkaedvke....vRevleekg.keik.....iiakienqegvenldeileasdgimvaRGDlGieipaekvvlaqkllikkcnlagkpvitatqmlesmiknPrptRaevsDvanavldGaDavmLsgetakGkyPveavkamaevaleaek 340
                   v+vG  +l+dDG+++l+v+++d+ +  +++ ++n+g ++ rkgvnlpg+ +dlpal++kDkadlk++v++g d++aasf+R+a++v++    + + ++e++   i+     +i+kie++egv+n+deile+sdgimvaRGDlG+eip+ekv++aqk++++kcn agkpvi+atqml+sm+++PrptRaev+Dv+ avldGaDavmLsgeta+GkyP+ +++am++v +ea+ 
  MMETSP1325-20131115|10719_1   3 TVQVGGWVLLDDGLIALEVTAIDHGSsSVTTIARNSGPIKPRKGVNLPGAVLDLPALTDKDKADLKWAVQEGADFVAASFIRSAANVRScvahLERCCDEAEsDGIRplrplVISKIESEEGVDNFDEILEESDGIMVARGDLGVEIPFEKVFAAQKMMVSKCNEAGKPVIVATQMLDSMMRQPRPTRAEVTDVGTAVLDGADAVMLSGETAAGKYPISSINAMQSVLKEADI 235
                  79*********************998899********************************************************9875211156677777645565555559*******************************************************************************************************************99975 PP

>> PF02887.11  Pyruvate kinase, alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.52   2.3e+03      32      48 ..     161     178 ..     159     235 .. 0.71
   2 !   76.7   0.1     2e-25   9.1e-22       2     105 ..     269     377 ..     268     389 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.52
                  HHHHT--S.SEEEEEES- CS
   PF02887.11  32 lvskyrpg.vpIlavtps 48 
                  +vsk+ ++  p+++ t+ 
  MMETSP1325-20131115|10719_1 161 MVSKCNEAgKPVIVATQM 178
                  567777665667776654 PP

  == domain 2    score: 76.7 bits;  conditional E-value: 2e-25
                  HHHHHHHHHHHHH..HT-SEEEEE-----HHHHHHHT--SSEEEEEES-HHHHH--TEEE--ETTE-SHHCHC.......HHHHHHHHHHHHHHTTS--SSSEEEEEE----- CS
   PF02887.11   2 eaiaeaaveaAke..lgakaIvvltesGstarlvskyrpgvpIlavtpseetarqlalvwGvhplvgkerais.......tdeviaealraalkkglikkgdevvvtaglpfg 105
                  +a+a  av++A +  l++++Iv++t +Gs ar ++++ p+vp++a+++++++ar+l+l++ v+p++++  + +       +  +  ea+r+a+++g++k+gd++v +     +
  MMETSP1325-20131115|10719_1 269 DAVAAGAVNTAAQrgLDIQCIVCITMTGSVARAIARHQPNVPVIAFCYDPQVARRLQLHRSVTPVMLQASK-NpfqegtrMGLLRTEAIRTAKEAGIVKSGDRIVFVDR---N 377
                  799********997788***********************************************7776666.67999998999999********************988...3 PP

>> PF03328.9  HpcH/HpaI aldolase/citrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.1   1.5e-09   6.9e-06      75     185 ..      64     170 ..      56     201 .. 0.75
   2 ?    0.7   0.0      0.04   1.8e+02      17      58 ..     199     239 ..     194     281 .. 0.69

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 1.5e-09
                  HHHGG.HHHTT--EEEESS--SHHHHHHHHHHTSHTT-----...CHHH-EEEEB--SHHHHHTHHHHHTSTTEEEEB---HHHHHH---TS---SHHHHHHHHHHHHHHHH--- CS
    PF03328.9  75 kqdle.vldagaqgvlvPkvetaeevrevvkilrypekgirg...anketcllaqiESaegvknadeIaavegldgvalGaeDlsadlglkrspegpevleartrilaaakaagi 185
                  k dl+ ++++ga+ v   ++ +a++vr  v+ l++  ++  +      +  ++  iES+egv+n deI+  e+ dg++++  Dl +++  ++      v++a+++++  +  ag 
  MMETSP1325-20131115|10719_1  64 KADLKwAVQEGADFVAASFIRSAANVRSCVAHLERCCDEAESdgiRPLRPLVISKIESEEGVDNFDEIL--EESDGIMVARGDLGVEIPFEK------VFAAQKMMVSKCNEAGK 170
                  5689999******************99888777666555544444788999*****************8..566888999999998886554......66666666666666665 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.04
                  HHCG--SEEEEESSTSS.HHHHHHHHHHHHHHHHHHHHHTTS CS
    PF03328.9  17 aaiagaDsvliDlEdavalaeKdaaRvlvsealkqlqaiaaa 58 
                  a + gaD+v++ +E a   +   ++ +  +++lk+++ i+++
  MMETSP1325-20131115|10719_1 199 AVLDGADAVMLSGETAA-GKYPISSINAMQSVLKEADIIEDT 239
                  667799******99998.444445556666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.48
# Mc/sec: 1981.99
//
Query:       MMETSP1325-20131115|10724_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-08   33.1   0.1    1.1e-07   32.1   0.1    1.6  1  PF04969.11 CS domain
     0.0032   17.4   0.0     0.0065   16.4   0.0    1.6  1  PF00041.16 Fibronectin type III domain


Domain annotation for each model (and alignments):
>> PF04969.11  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.1   1.6e-11   1.1e-07       1      70 [.     178     246 ..     178     270 .. 0.90

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 1.6e-11
                  ---EEEEETTEEEEEEE----.---S-EEEEE----EEEEE---....EEE---BSS-EEEEEEEEEE--- CS
   PF04969.11   1 prydWyQtleeVtitipvkgv.ikkedvkveikkkslkvsikgpgekeyllegeLfgeIdpeesswkiedt 70 
                  pry W Qt+e V + + ++++ ++++++++++  ++l++  +g   +++ +eg+L++ ++pe++ w ie+ 
  MMETSP1325-20131115|10724_1 178 PRYHWRQTSEVVQVVVWLEDEdVTSKQIEFKCCGTTLRLAKRG--AETPYVEGKLYALVKPEAAEWVIESA 246
                  79**********************************9999977..4779*******************985 PP

>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   9.6e-07    0.0065      48      85 .]     122     159 ..      64     159 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 9.6e-07
                  EEEECCTTSEEEEES--TT-EEEEEEEEEC------BE CS
   PF00041.16  48 eftvprtttsvtltgLkpgteYefrVqavngagegpeS 85 
                  +   ++ ++s+t tg++pg+  efrV++ n++g + +S
  MMETSP1325-20131115|10724_1 122 TLEGSEAKNSYTATGITPGQCLEFRVRTTNTKGSSDWS 159
                  3334445779***********************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 1279.56
//
Query:       MMETSP1325-20131115|10726_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.65
# Mc/sec: 471.90
//
Query:       MMETSP1325-20131115|10725_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 708.92
//
Query:       MMETSP1325-20131115|10727_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.62
# Mc/sec: 216.45
//
Query:       MMETSP1325-20131115|10728_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0022   17.2   0.5     0.0056   15.9   0.3    1.7  1  PF07145.10 Ataxin-2 C-terminal region


Domain annotation for each model (and alignments):
>> PF07145.10  Ataxin-2 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.3   4.1e-07    0.0056       7      18 .]      17      28 ..      17      28 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 4.1e-07
   PF07145.10  7 NPnAkEFVPsva 18
                 NP+A +FVPs++
  MMETSP1325-20131115|10728_1 17 NPHAAPFVPSGY 28
                 **********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|10729_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 449.32
//
Query:       MMETSP1325-20131115|10731_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-35  122.2   0.0    1.9e-35  122.0   0.0    1.1  1  PF00448.17 SRP54-type protein, GTPase domain
    3.3e-05   23.4   0.3    6.4e-05   22.5   0.2    1.4  1  PF13479.1  AAA domain
    5.3e-05   22.8   1.0    0.00043   19.9   0.7    2.1  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
    0.00011   21.6   0.3    0.00029   20.2   0.2    1.7  1  PF01656.18 CobQ/CobB/MinD/ParA nucleotide binding domain
     0.0002   21.6   0.0    0.00029   21.1   0.0    1.3  1  PF13191.1  AAA ATPase domain
    0.00044   20.2   0.1     0.0011   19.0   0.1    1.6  1  PF13401.1  AAA domain
    0.00045   19.7   0.1    0.00069   19.1   0.1    1.5  1  PF13604.1  AAA domain
     0.0021   17.6   0.5     0.0041   16.7   0.2    1.9  1  PF13245.1  Part of AAA domain
     0.0027   16.2   0.1      0.023   13.1   0.0    1.9  2  PF10412.4  Type IV secretion-system coupling protein DNA-binding domain
     0.0035   16.9   0.5       0.29   10.7   0.1    2.2  2  PF03266.10 NTPase
     0.0039   16.9   0.0     0.0053   16.5   0.0    1.2  1  PF13671.1  AAA domain
      0.004   15.8   0.1     0.0079   14.8   0.0    1.4  2  PF03308.11 ArgK protein
     0.0045   16.2   0.7      0.016   14.5   0.5    1.8  1  PF13481.1  AAA domain
     0.0048   16.4   0.1     0.0087   15.5   0.0    1.4  1  PF05127.9  Helicase
     0.0094   16.3   0.0      0.014   15.7   0.0    1.3  1  PF08477.8  Miro-like protein
  ------ inclusion threshold ------
      0.011   15.8   0.2      0.046   13.8   0.1    1.8  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
      0.012   15.7   0.0      0.013   15.5   0.0    1.3  1  PF12804.2  MobA-like NTP transferase domain
      0.012   15.4   0.5       0.02   14.7   0.4    1.4  1  PF13521.1  AAA domain
      0.013   15.3   0.0       0.02   14.6   0.0    1.5  1  PF13173.1  AAA domain
      0.014   15.2   0.1        2.2    8.0   0.0    2.1  2  PF13614.1  AAA domain
      0.015   14.2   0.0      0.018   13.9   0.0    1.1  1  PF09848.4  Uncharacterized conserved protein (DUF2075)
      0.015   14.6   0.0      0.025   13.9   0.0    1.2  1  PF00009.22 Elongation factor Tu GTP binding domain
      0.015   14.2   0.0      0.021   13.8   0.0    1.2  1  PF06414.7  Zeta toxin
      0.022   13.6   0.0      0.023   13.5   0.0    1.2  1  PF00735.13 Septin
       0.03   13.8   0.2       0.04   13.3   0.2    1.4  1  PF05729.7  NACHT domain
      0.032   13.7   0.0      0.044   13.2   0.0    1.2  1  PF01443.13 Viral (Superfamily 1) RNA helicase
      0.034   13.7   0.0      0.049   13.2   0.0    1.2  1  PF01637.13 Archaeal ATPase
      0.045   13.0   0.8       0.53    9.6   0.5    2.2  1  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain
      0.052   14.2   0.1      0.082   13.5   0.0    1.4  1  PF13207.1  AAA domain
      0.059   12.4   0.0      0.067   12.2   0.0    1.3  1  PF00142.13 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
      0.084   12.4   0.2       0.11   12.1   0.1    1.3  1  PF07728.9  AAA domain (dynein-related subfamily)
       0.11   11.7   0.4       0.34   10.1   0.1    1.7  2  PF02223.12 Thymidylate kinase


Domain annotation for each model (and alignments):
>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   0.0   4.4e-38   1.9e-35       1      98 [.      50     149 ..      50     151 .] 0.95

  Alignments for each domain:
  == domain 1    score: 122.0 bits;  conditional E-value: 4.4e-38
                  SEEEEEE-------TTTHHHHHHHHHHT.---EEEEE--TSSHHHHHHHHHHHHHTT-EEEE.-SS--EHHHHHHHHHHHHHHTT-SEEEEE----GTTC CS
   PF00448.17   1 pnvillvGlqGaGKTTtlaKLAallkke.gkkvllvaaDtfRaaAveQLktlaeklgvpvik.ekeekdpaavakeavekakeekidvvlvDTaGrlqnd 98 
                  p+v++++G +G+GKTTt++KL+++l+ e ++kvll+a+DtfRaaAveQL+++ e+++v++++ ++ +++p +v+++a+ekak+ek+dv+++DT+Grl n+
  MMETSP1325-20131115|10731_1  50 PTVLMVIGANGMGKTTTIGKLSRRLRVEgEQKVLLAACDTFRAAAVEQLEMWSERAEVDIVTpQQDTEKPSTVLFRALEKAKQEKYDVLIIDTSGRLSNN 149
                  689***********************9989*******************************96666669****************************987 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.2   1.5e-07   6.4e-05       6      81 ..      53     147 ..      50     150 .. 0.61

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 1.5e-07
    PF13479.1   6 vliYGkpGiGKTslaktlpktlfldleagakavkdlkrgdsvdvr......swqdlre...................alkeleedlaeydtlviDsitkle 81 
                  +++ G  G+GKT+++ +l++ l +  e+ ++    +   d+++ +       w++ +e                   al+   ++ ++yd+l+iD+ ++l+
  MMETSP1325-20131115|10731_1  53 LMVIGANGMGKTTTIGKLSRRLRVEGEQKVL---LA-ACDTFRAAaveqleMWSERAEvdivtpqqdtekpstvlfrALEK--AKQEKYDVLIIDTSGRLS 147
                  6899**************6666666665522...22.22222222111112333333355555666666899997554533..44669********99886 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.7     1e-06   0.00043       2      96 ..      52     139 ..      51     143 .. 0.75

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 1e-06
                  EEEEE-------HHHHHHHHHHHHH-------EEE-SS.-TTSS----TTHHHH----EEEEE-SSEEEEEEE-SSS----HHHHHHCS-......-S-EE CS
    PF03205.9   2 ivavvGpkdsGKTtlieklvnklkergyrvavvkhldhGqgeidkpGkDtwrlkagadlvlvsieeplavvtgfllekeadLeallsvls......vDlvl 96 
                  +++v+G  + GKTt+i kl + l      v        G++++ +  +Dt+r +a+++l + s++ ++++vt   + +e++   l+++l+      +D+++
  MMETSP1325-20131115|10731_1  52 VLMVIGANGMGKTTTIGKLSRRLR-----VE-------GEQKVLLAACDTFRAAAVEQLEMWSERAEVDIVTPQ-QDTEKPSTVLFRALEkakqekYDVLI 139
                  79*****************55555.....55.......778888888888888888888888888888888866.56666656666666566667777766 PP

>> PF01656.18  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2   6.7e-07   0.00029       6     108 ..      57     148 ..      52     151 .] 0.62

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 6.7e-07
                  xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF01656.18   6 gkGGvGKTtlaanLaralak.rglrVlliDlDpqannssllgkvseilkkgeekasallenfeagllaegeeg.lvesllkkalealikeayDvviiDtapglge 108
                  g  G GKTt+   L r l+   + +Vll  +D+     +  ++v e+l    e+ s + ++++  ++++  ++ + +++l +ale+ ++e+yDv+iiDt + l+ 
  MMETSP1325-20131115|10731_1  57 GANGMGKTTTIGKLSRRLRVeGEQKVLLAACDT-----FRAAAV-EQL----EMWS-ERAEVDIVTPQQ--DTeKPSTVLFRALEKAKQEKYDVLIIDTSGRLSN 148
                  556889999999999999883445677776643.....333223.222....2332.123333333333..33445668889999989999********999875 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   6.8e-07   0.00029      19     103 ..      45     111 ..      38     145 .. 0.57

  Alignments for each domain:
  == domain 1    score: 21.1 bits;  conditional E-value: 6.8e-07
    PF13191.1  19 vsegsp.lllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrnlpysaiiqalrellrqlltelaaelggwreallaalga 103
                  + eg p +l v+G+ G+GK++ + +     l +rlr+++++ ++l +  ++                + +++l+ w e ++ ++ +
  MMETSP1325-20131115|10731_1  45 PDEGIPtVLMVIGANGMGKTTTIGK-----LSRRLRVEGEQKVLLAACDTFR--------------AAAVEQLEMWSERAEVDIVT 111
                  4556667899***************.....8888888887766444443333..............33333333333333333333 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.1   2.5e-06    0.0011       6      96 ..      52     143 ..      50     150 .. 0.51

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 2.5e-06
    PF13401.1   6 ilvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapastspkellqkllsalglpakg........rltteell.ealqealrrrrtrlliiDEa 96 
                  +l+v+G  G+GKTt++ +l r+l  e e+       +v ++a  + ++ + + l+   + a+         + + +++l +al++a ++++ ++liiD  
  MMETSP1325-20131115|10731_1  52 VLMVIGANGMGKTTTIGKLSRRLRVEGEQ-------KVLLAACDTFRAAAVEQLEMWSERAEVdivtpqqdTEKPSTVLfRALEKAKQEKY-DVLIIDTS 143
                  789******************99544433.......3333333333333333333333333333333322323333333133333333333.58888855 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   1.6e-06   0.00069      20     107 ..      52     148 ..      26     151 .] 0.68

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 1.6e-06
    PF13604.1  20 vavvqGpAGtGKttvlkalrealeaag.krvvglAptgkaakvLeee.................lgiearTiasllerldkeeaegrke..........ldaktllvvDEAgmvdt 107
                  v +v G+ G GKtt+++ l + l+ +g ++v+++A     a+++e+                  ++ ++                   +           ++ ++l++D +g +++
  MMETSP1325-20131115|10731_1  52 VLMVIGANGMGKTTTIGKLSRRLRVEGeQKVLLAACDTFRAAAVEQLemwseraevdivtpqqdTEKPS-------------------TvlfralekakQEKYDVLIIDTSGRLSN 148
                  56777*********************9899999997665555544432223333333322222222222...................1344555443346677999999988776 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.2   9.7e-06    0.0041      12      58 ..      52      98 ..      26     123 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 9.7e-06
    PF13245.1 12 llvvtGgPGtGKTttlaaiiaallaarekpgrsvllv...aptgraakrl 58
                 +l+v G  G GKT t +   +++l  r ++ ++vll+   ++  +a+++l
  MMETSP1325-20131115|10731_1 52 VLMVIGANGMGKT-TTIGKLSRRL--RVEGEQKVLLAacdTFRAAAVEQL 98
                 5788*********.7777777777..334466799995555666666655 PP

>> PF10412.4  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   5.5e-05     0.023      18      48 ..      53      83 ..      41      97 .. 0.89
   2 ?    1.1   0.0      0.25   1.1e+02      29      59 ..     120     150 ..     117     151 .] 0.88

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 5.5e-05
    PF10412.4 18 ilivGttGtGKtqalrelldqirargdraii 48
                 ++++G+ G+GKt+++ +l +++r +g++ + 
  MMETSP1325-20131115|10731_1 53 LMVIGANGMGKTTTIGKLSRRLRVEGEQKVL 83
                 799*********************9998875 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.25
    PF10412.4  29 tqalrelldqirargdraiiyDkkGefvekf 59 
                  +++l + l+++++++  ++i+D++G + +++
  MMETSP1325-20131115|10731_1 120 STVLFRALEKAKQEKYDVLIIDTSGRLSNNY 150
                  67888889999**************998877 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.1   0.00068      0.29       2      27 ..      53      78 ..      52      82 .. 0.88
   2 ?    4.7   0.0     0.045        19      75     107 ..     113     146 ..      86     150 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00068
                 EEEE-------HHHHHHHHHH-...- CS
   PF03266.10  2 vfiTGepgvGKtTlvkkvlellkseg 27
                 +++ G  g+GKtT + k++++l+ eg
  MMETSP1325-20131115|10731_1 53 LMVIGANGMGKTTTIGKLSRRLRVEG 78
                 57889****************98765 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.045
                  ---HHHHHHHHHHHHHHHH.HHH-EEEE------ CS
   PF03266.10  75 vvnleefeelalpalrnal.eeadviviDEIGkm 107
                  + ++e+ ++++ +al++a  e+ dv++iD  G++
  MMETSP1325-20131115|10731_1 113 QQDTEKPSTVLFRALEKAKqEKYDVLIIDTSGRL 146
                  55677788899999*999978889*****87765 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.3e-05    0.0053       1      75 [.      52     139 ..      52     149 .. 0.65

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.3e-05
    PF13671.1   1 lvllvGlpGsGKstlaerllkklg......yvrlsqdtlrkrlfg......tdqqskt......dytrvlkrlyqilnklarkalsagrsviv 75 
                  +++++G+ G GK+t + +l ++l         +   dt+r +  +      +     +       +++ +++   +l++ ++ka +++++v++
  MMETSP1325-20131115|10731_1  52 VLMVIGANGMGKTTTIGKLSRRLRvegeqkVLLAACDTFRAAAVEqlemwsE-----RaevdivTPQQDTEKPSTVLFRALEKAKQEKYDVLI 139
                  789***************9988877777855555666666644444444430.....222322234444444556788999999999999866 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.9e-05    0.0079      17      64 ..      38      85 ..      27      93 .. 0.81
   2 ?   -3.1   0.0       5.4   2.3e+03     122     131 ..     135     144 ..     126     145 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.9e-05
                 HHHHHHGGG----EEE--B-------HHHHHH---HHHH----EEEEE CS
   PF03308.11 17 ellrkilpkaGralvvGltGvPGaGkstlveklikelrrrGkrvavla 64
                 + ++  +p+ G  +v+ + G  G Gk t++ kl  +lr +G++  +la
  MMETSP1325-20131115|10731_1 38 RAIKFATPDEGIPTVLMVIGANGMGKTTTIGKLSRRLRVEGEQKVLLA 85
                 45667788999999***************************8755554 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 5.4
                  --EEEEE--- CS
   PF03308.11 122 fDvilvetvG 131
                  +Dv++++t G
  MMETSP1325-20131115|10731_1 135 YDVLIIDTSG 144
                  8999999977 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.5   3.7e-05     0.016      34     154 ..      51     146 ..      27     149 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.7e-05
    PF13481.1  34 sltllaGapgtGKStlalqlaaavatGepflgpvvpepgrVlylsaEdseaelrrrlsailaalddpenlllvslagvgslrltaddrrdalltadlerllaaieelegpdlvviDtlsrl 154
                  ++++++Ga g GK+t +  l  ++          v  +++Vl+ +++  +a   + l+ + +++     +++v+  ++        d++++  t  +++l+  +++ e++d+++iDt  rl
  MMETSP1325-20131115|10731_1  51 TVLMVIGANGMGKTTTIGKLSRRLR---------VEGEQKVLLAACDTFRAAAVEQLEMWSERA----EVDIVTP-QQ--------DTEKP-STVLFRALE-KAKQ-EKYDVLIIDTSGRL 146
                  689999********99998888777.........345789999999999999999999999986....6777763.22........23333.355666655.5788.89*******97766 PP

>> PF05127.9  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0     2e-05    0.0087       2      97 ..      55     141 ..      54     148 .. 0.67

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 2e-05
    PF05127.9   2 ltAdRGRGKSaalGlalaalvaegksnilvtapskenvktlfeflekglealglkeeekkekaekaevrvnkqrieyiapdellklkeqadllvvD 97 
                  ++++ G GK++++G++  +l  eg++++l++a +   ++ + e+le   e+ +++        + ++ + + +++ + a ++++++k   d+l++D
  MMETSP1325-20131115|10731_1  55 VIGANGMGKTTTIGKLSRRLRVEGEQKVLLAACDTFRAAAV-EQLEMWSERAEVDI------VTPQQDTEKPSTVLFRALEKAKQEK--YDVLIID 141
                  67899*************************99865443332.22222222222222......1111222346788888888888876..5999998 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.4e-05     0.014       2      60 ..      53     130 ..      52     145 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 3.4e-05
    PF08477.8   2 vvvvGdkgvGKssllsqlvgeefp................kkklpeeikgdtlavktlevdvdtel...lelwdlggr 60 
                  ++v+G  g+GK++ + +l ++ ++                    ++e+ +++  v++++ + dte+   + ++ l+ +
  MMETSP1325-20131115|10731_1  53 LMVIGANGMGKTTTIGKLSRRLRVegeqkvllaacdtfraAAVEQLEMWSERAEVDIVTPQQDTEKpstVLFRALEKA 130
                  59****************998888899999999999999988889999999999999999999999777444444332 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   0.00011     0.046       2      65 ..      54     141 ..      53     149 .. 0.55

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 0.00011
                  EEE-------HHHHHHHHHHCTHE....EEEEECCSSSSS..................T-HHHHHHHHHHHHHHHHTS..-SEEEEEE CS
   PF00004.24   2 llyGppGtGKTllakavakelgve....fleisgsellsk..................yvgesekkirelfkeakeka..kpsilfiD 65 
                  +++G  G+GKT+++  + + l ve    +l   + +++                     ++++ek    lf+++++ +  k  +l+iD
  MMETSP1325-20131115|10731_1  54 MVIGANGMGKTTTIGKLSRRLRVEgeqkVLLAACDTFRAAaveqlemwseraevdivtPQQDTEKPSTVLFRALEKAKqeKYDVLIID 141
                  799*****************96443333333333333322333333344455555554444444444444444433334334666666 PP

>> PF12804.2  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.0   3.1e-05     0.013      82     135 ..      75     126 ..       9     145 .. 0.77

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 3.1e-05
                  H-...--EEEEETT-TT--HHHHHHHHH--------EEEEESSSB..-TTEE-G CS
    PF12804.2  82 aaegadavlvlacDmPlltaellerllealaesgadvvvpryegerghpllfsr 135
                  ++eg++ vl++acD+  ++a+++e+l    ++++ d+v p+++ e    +lf++
  MMETSP1325-20131115|10731_1  75 RVEGEQKVLLAACDT--FRAAAVEQLEMWSERAEVDIVTPQQDTEKPSTVLFRA 126
                  35699**********..69**************************999999975 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.4   4.7e-05      0.02       3      81 ..      54     143 ..      52     150 .. 0.51

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 4.7e-05
    PF13521.1   3 vitGgpstGKTtlleaLaar....gyp.vv...pEvarevleeklakgeealpwee.....dllafaeavleaqleqeaaaaaskllfcDrg 81 
                  +++G+ + GKTt++ +L++r    g + v+    ++ r    e+l+ + e ++  +     +  +    vl  +le++++ ++ ++l++D++
  MMETSP1325-20131115|10731_1  54 MVIGANGMGKTTTIGKLSRRlrveGEQkVLlaaCDTFRAAAVEQLEMWSERAEV-DivtpqQDTEKPSTVLFRALEKAKQ-EKYDVLIIDTS 143
                  589***************887777433222123444444444444333333321.0111112222223333333332222.56677777765 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   4.8e-05      0.02       3      48 ..      51      98 ..      49     148 .. 0.72

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 4.8e-05
    PF13173.1  3 kilvitGpRrvGKttllkqlakell..keesilyinlddeelrkladp 48
                  +l+++G+ ++GKtt++ +l ++l    e+++l  ++d+ +  + +++
  MMETSP1325-20131115|10731_1 51 TVLMVIGANGMGKTTTIGKLSRRLRveGEQKVLLAACDTFRAAAVEQL 98
                 5899****************9888899999999999**9887554433 PP

>> PF13614.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.023       9.8       2      42 ..      52      92 ..      51     121 .. 0.84
   2 ?    8.0   0.0    0.0051       2.2     108     133 ..     124     150 ..      94     151 .] 0.73

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.023
    PF13614.1  2 vigvySpvggegkttlAlnlaqslaenrkk.vLlldleeysg 42
                 v++v++  +g+gktt    l++ l+ ++++ vLl  ++ ++ 
  MMETSP1325-20131115|10731_1 52 VLMVIG-ANGMGKTTTIGKLSRRLRVEGEQkVLLAACDTFRA 92
                 678888.789******************88999977777665 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0051
    PF13614.1 108 eqLlerlke.rYdvvilDlgslldedf 133
                   + le+ k+ +Ydv+i+D+++ l++ +
  MMETSP1325-20131115|10731_1 124 FRALEKAKQeKYDVLIIDTSGRLSNNY 150
                  4456666778*********99887765 PP

>> PF09848.4  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   4.2e-05     0.018       2      96 ..      51     147 ..      50     150 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 4.2e-05
    PF09848.4   2 kvilvtGvaGtGKtvvalnllaeledseeertavflsgNhplvkvlrealakkl......ekkkkkeavkkpssfinnlskaekkkpkedvvivDEAhrll 96 
                  +v++v G+ G GKt    +l  +l    e++++v+l     ++++  e+l+           + ++++ k ++ +   l  +++k++k+dv+i+D + rl 
  MMETSP1325-20131115|10731_1  51 TVLMVIGANGMGKTTTIGKLSRRL--RVEGEQKVLLAACDTFRAAAVEQLEMWSeraevdIVTPQQDTEKPSTVLFRAL--EKAKQEKYDVLIIDTSGRLS 147
                  58899*******************..9999999***9999999999999987764444533333334444444444444..69************888876 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   5.8e-05     0.025       6      79 ..      53     144 ..      50     147 .. 0.69

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 5.8e-05
                  EEEEESTT---HHHHHHHHHHCCCCEHHHHHH...HC.-....................HHHCCHHHH---BBSSEEEEEET.ESCEEEEEEE--- CS
   PF00009.22   6 igiighvDhGKtTltdallykagaiskrgeea...eg.erl..................ldklkeerergiTiksaaisleketkkrlinliDtPG 79 
                  +++ig    GKtT++++l  ++    +   ++   ++ +++                  + + ++  e+  T+   a +   +++k+ + +iDt G
  MMETSP1325-20131115|10731_1  53 LMVIGANGMGKTTTIGKLSRRLRVEGE---QKvllAAcDTFraaaveqlemwseraevdIVTPQQDTEKPSTVLFRALEKA-KQEKYDVLIIDTSG 144
                  67999999***********99977554...332343323334455666666666666666666666666666666666665.9***********99 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.9e-05     0.021      10      99 ..      44     139 ..      33     148 .. 0.74

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.9e-05
    PF06414.7  10 vpeqekpkavllgGqpGAGKtslaellleela...agnivridaDelrkyhpayrelek.k.dpkeaseltqkd.aselveklidralekgyniil 99 
                  +p++  p+++++ G  G GKt+++ +l ++l+   +++++    D++r    +  e+ + + + + + +   ++  s++  +++++a +++y++++
  MMETSP1325-20131115|10731_1  44 TPDEGIPTVLMVIGANGMGKTTTIGKLSRRLRvegEQKVLLAACDTFRAAAVEQLEMWSeRaEVDIVTPQQDTEkPSTVLFRALEKAKQEKYDVLI 139
                  46678899************************998888888899****987555554442223333333333225777888888999999999875 PP

>> PF00735.13  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.4e-05     0.023       2      39 ..      48      85 ..      47     144 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5.4e-05
   PF00735.13  2 gieftlmvvGesglGkttlintlfetdlieeeeeleea 39
                 gi   lmv+G++g+Gktt i  l ++  +e e+++  a
  MMETSP1325-20131115|10731_1 48 GIPTVLMVIGANGMGKTTTIGKLSRRLRVEGEQKVLLA 85
                 78889***************999888777766554444 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.2   9.5e-05      0.04       2      31 ..      52      81 ..      51     148 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 9.5e-05
    PF05729.7  2 tvilqGeaGsGKTtLlqklasawakgklpq 31
                 ++++ G++G+GKTt + kl + ++ +  ++
  MMETSP1325-20131115|10731_1 52 VLMVIGANGMGKTTTIGKLSRRLRVEGEQK 81
                 6899****************9999887544 PP

>> PF01443.13  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0    0.0001     0.044       2      66 ..      54     142 ..      53     150 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 0.0001
   PF01443.13   2 vvhGvpGcGKStlirkllrt.................ltvnrptaelrtegk........pklpnlsvrtvdsflmalvkskgkililDE 66 
                  +v G+ G GK+t i kl r                    + +++ e+ +e++        ++++++s+  ++++++a+  +k+++li+D 
  MMETSP1325-20131115|10731_1  54 MVIGANGMGKTTTIGKLSRRlrvegeqkvllaacdtfRAAAVEQLEMWSERAevdivtpqQDTEKPSTVLFRALEKAKQ-EKYDVLIIDT 142
                  788999***********************99999888555666688888888999999878888888888888888765.56*******6 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00011     0.049      18      88 ..      48     113 ..      44     146 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 0.00011
                  ..-SEEEEE--TT---HHHHHHHHHH-..---HHHHH------HHHHHHHH......HHHS-SHHHHHHHHT. CS
   PF01637.13  18 epnsiiviyGprrsGKTaLlkeileelkekgkrvvyyinlreefeskleefie..eeeekkklakalgialpk 88 
                  +  +++++ G  ++GKT+ + ++ ++l+  g+++v + +  + +++ +e+++   e         ++ i +p+
  MMETSP1325-20131115|10731_1  48 GIPTVLMVIGANGMGKTTTIGKLSRRLRVEGEQKVLLAACDTFRAAAVEQLEMwsER-------AEVDIVTPQ 113
                  5568999*****************************999999999999988223311.......122222222 PP

>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.5    0.0012      0.53       2      96 ..      52     147 ..      51     151 .] 0.57

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0012
                  EEEEE-------HHHHHHHHC..HS---S-EEEEES-.----HCCCCCHHT-S-....EEEE----ECC-TTS-HHHHHCCCHHHCH-T-SEEEEE---.-S CS
   PF02492.14   2 vtvltGflGsGKTtLleklle..knreglkiaVivnd.fgetkiDaellretgve...ivelnnGciCctlredllmelealeelkeerldvlliEttG.la 96 
                  v+++ G  G GKTt + kl +  + + ++k+     d f  + +++  + ++ +e   +   ++ +      +     ++ale+ k+e++dvl+i t+G l+
  MMETSP1325-20131115|10731_1  52 VLMVIGANGMGKTTTIGKLSRrlRVEGEQKVLLAACDtFRAAAVEQLEMWSERAEvdiVTPQQDTE------KPSTVLFRALEKAKQEKYDVLIIDTSGrLS 147
                  677888888888888888887553333333333333314445555555544433211122222233......34446677777777888*********9776 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   0.00019     0.082       2      24 ..      53      78 ..      52     149 .. 0.58

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 0.00019
                 E--B--TT---HHHHHHHHHHS...T CS
    PF13207.1  2 iaitGppGsGKsTlakeLaerl...g 24
                   ++G+ G GK+T   +L++rl   g
  MMETSP1325-20131115|10731_1 53 LMVIGANGMGKTTTIGKLSRRLrveG 78
                 689******************84431 PP

>> PF00142.13  4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00016     0.067       4      40 ..      54      91 ..      51     141 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.00016
   PF00142.13  4 aiYGkGGiGksttsqnlaaalaemg.kkvlivGCDPka 40
                  + G  G+Gk tt   l+  l   g +kvl+  CD   
  MMETSP1325-20131115|10731_1 54 MVIGANGMGKTTTIGKLSRRLRVEGeQKVLLAACDTFR 91
                 577999***************98888*********754 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   0.00025      0.11       2      32 ..      53      87 ..      52     141 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00025
                 EEEE------HHHHHHHGGGGB....S--EEEEE- CS
    PF07728.9  2 vlLvGppGtgKselaerlaeal....nreveyvql 32
                 ++++G+ G gK++ + +l+++l    +++v+  ++
  MMETSP1325-20131115|10731_1 53 LMVIGANGMGKTTTIGKLSRRLrvegEQKVLLAAC 87
                 689*******************8766566555555 PP

>> PF02223.12  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1    0.0008      0.34       3      29 ..      57      84 ..      56      94 .. 0.91
   2 ?   -0.7   0.0       1.6     7e+02     154     176 ..     120     143 ..      95     149 .. 0.68

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0008
                 --TT---HHHHHHHHHHHHHSEE-.EEE CS
   PF02223.12  3 GlDGaGKttqaellkeklkeqgik.vvl 29
                 G +G GKtt + +l ++l+ +g++ v+l
  MMETSP1325-20131115|10731_1 57 GANGMGKTTTIGKLSRRLRVEGEQkVLL 84
                 889*******************997766 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 1.6
                  HHHHHHHHHHHH.CTTTEEEEETT CS
   PF02223.12 154 rkvrekylelak.ekeriliidas 176
                   +v  ++le ak ek  +liid+s
  MMETSP1325-20131115|10731_1 120 STVLFRALEKAKqEKYDVLIIDTS 143
                  445556777777777788888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      479  (0.0350351); expected 273.4 (0.02)
Passed Vit filter:                       106  (0.00775307); expected 13.7 (0.001)
Passed Fwd filter:                        32  (0.00234055); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 695.87
//
Query:       MMETSP1325-20131115|10730_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.33s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 1329.74
//
Query:       MMETSP1325-20131115|10732_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       78  (0.00570509); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 263.60
//
Query:       MMETSP1325-20131115|10733_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 194.42
//
Query:       MMETSP1325-20131115|10735_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-18   65.0  10.0      2e-11   43.1   0.1    4.4  4  PF00400.27 WD domain, G-beta repeat
    4.8e-05   23.0   0.1      0.017   14.7   0.0    3.1  3  PF08662.6  Eukaryotic translation initiation factor eIF2A
     0.0016   17.8   3.4      0.037   13.3   0.1    2.5  2  PF13360.1  PQQ-like domain
     0.0019   15.9   1.2       0.69    7.5   0.0    2.3  2  PF04762.7  IKI3 family
  ------ inclusion threshold ------
       0.01   15.3   3.5       0.79    9.3   0.0    3.5  4  PF07676.7  WD40-like Beta Propeller Repeat
      0.015   13.3   0.4        2.7    5.9   0.0    2.5  2  PF11715.3  Nucleoporin Nup120/160
      0.043   11.9   0.1       0.87    7.5   0.1    2.0  2  PF11768.3  Protein of unknown function (DUF3312)
       0.19   11.1   3.2        1.5    8.2   0.1    2.9  3  PF12657.2  Transcription factor IIIC subunit delta N-term


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.2   5.1e-07   0.00087      15      39 .]       3      27 ..       3      27 .. 0.97
   2 !   43.1   0.1   1.2e-14     2e-11       3      39 .]      38      74 ..      36      74 .. 0.95
   3 ?    2.5   0.0      0.08   1.4e+02      17      28 ..      97     108 ..      97     119 .. 0.90
   4 ?    4.4   0.1      0.02        34      23      39 .]     153     169 ..     140     169 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 5.1e-07
                 EEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27 15 tcvafspdgpllasgSrDgtirlWd 39
                 ++va+spd+++la + +Dg i +Wd
  MMETSP1325-20131115|10735_1  3 SSVAWSPDSTMLAIALADGAIEIWD 27
                 59**********************9 PP

  == domain 2    score: 43.1 bits;  conditional E-value: 1.2e-14
                 EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27  3 ckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 +  tl+gH ++  +va+spdg+ las++ Dgt+++Wd
  MMETSP1325-20131115|10735_1 38 PSETLEGHDGSAVAVAWSPDGSTLASAGLDGTVKIWD 74
                 5679********************************9 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.08
                  EEEESSSTEEEE CS
   PF00400.27  17 vafspdgpllas 28 
                  va+s +g+lla+
  MMETSP1325-20131115|10735_1  97 VAWSASGNLLAT 108
                  79*********8 PP

  == domain 4    score: 4.4 bits;  conditional E-value: 0.02
                  STEEEEEETTSEEEEEE CS
   PF00400.27  23 gpllasgSrDgtirlWd 39 
                    ++ + + Dg  ++Wd
  MMETSP1325-20131115|10735_1 153 DGIIYTTGFDGAFHIWD 169
                  5689************9 PP

>> PF08662.6  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   9.7e-06     0.017      65     134 ..       5      79 ..       3     109 .. 0.59
   2 ?    4.7   0.0     0.011        19     106     144 ..      97     132 ..      93     143 .. 0.73
   3 ?   -0.0   0.0      0.32   5.4e+02     117     140 ..     158     178 ..     135     186 .. 0.65

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 9.7e-06
    PF08662.6  65 vaWspkskefavi..yGkmpa..kislfdl..kvnvisklkekkrNtifwspqgrlvllaGfgnlaGeleiydvk..k 134
                  vaWsp+s+ +a+    G ++    + +fd   + + + + + +++ ++ wsp g  ++ aG+    G+++i+d +  +
  MMETSP1325-20131115|10735_1   5 VAWSPDSTMLAIAlaDGAIEIwdVAVVFDGgdTPSETLEGHDGSAVAVAWSPDGSTLASAGL---DGTVKIWDADsrR 79 
                  78999998877751134443332345566633356666666778888999999999999996...5779999988542 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.011
    PF08662.6 106 ifwspqgrlvllaGfgnlaGeleiydvkklkkiakaeas 144
                  + ws +g+l+++    n  G+l+i+d ++ k    +e +
  MMETSP1325-20131115|10735_1  97 VAWSASGNLLATI---NYYGQLQIWDSSDWKISLVIETE 132
                  6899999998875...567********965544444333 PP

  == domain 3    score: -0.0 bits;  conditional E-value: 0.32
    PF08662.6 117 laGfgnlaGeleiydvkklkkiak 140
                  ++G   + G+  i+d+ + +++++
  MMETSP1325-20131115|10735_1 158 TTG---FDGAFHIWDTTTGQNLKT 178
                  444...457788888876666655 PP

>> PF13360.1  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.2     0.011        19       2      55 ..      67     122 ..      48     145 .. 0.77
   2 !   13.3   0.1   2.1e-05     0.037      30      91 ..     147     210 ..     123     218 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.011
    PF13360.1   2 egvvsaldaatGkelWrv....dlkpalgggvseavldggtlfvasakgrlvaldaat 55 
                  +g+v+ +da+  ++ W+     dl+ +lg +++  + +g+ l + +++g+l  +d ++
  MMETSP1325-20131115|10735_1  67 DGTVKIWDAD--SRRWKCtdtlDLGAKLGEPPVAWSASGNLLATINYYGQLQIWDSSD 122
                  5778888874..5777776666664457776666664677777769999999999876 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 2.1e-05
    PF13360.1  30 seavldggtlfvasakgrlvaldaatGkvlWskslegeiegap.lvaggrvvvvtadn.slval 91 
                  ++  l++g +++++ +g ++ +d+ tG+ l ++sl+     +p ++a +r++    +n   + l
  MMETSP1325-20131115|10735_1 147 AWDALSDGIIYTTGFDGAFHIWDTTTGQNLKTVSLRVGSGYDPaTLAVNRLYQSGYGNgGAYVL 210
                  566779************************************99*******9888555455555 PP

>> PF04762.7  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.1   0.00063       1.1     308     331 ..       4      28 ..       2      30 .. 0.89
   2 !    7.5   0.0    0.0004      0.69     302     363 ..      45     107 ..      38     140 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00063
    PF04762.7 308 sLaWnsdSevLavsledr.vqlwtt 331
                  s+aW+ dS++La+ l d  +++w +
  MMETSP1325-20131115|10735_1   4 SVAWSPDSTMLAIALADGaIEIWDV 28 
                  689**********999988****65 PP

  == domain 2    score: 7.5 bits;  conditional E-value: 0.0004
    PF04762.7 302 eeekvesLaWnsdSevLav.sledrvqlwttgNyhWYLKqelrfsesegvaevkWdpekpltl 363
                  ++ +  ++aW+ d++ La   l  +v++w     +W     l++ ++ g   v W ++ +l  
  MMETSP1325-20131115|10735_1  45 HDGSAVAVAWSPDGSTLASaGLDGTVKIWDADSRRWKCTDTLDLGAKLGEPPVAWSASGNLLA 107
                  444556677777777777745555577777777777777777777777777777777655422 PP

>> PF07676.7  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.011        20      15      26 ..       6      17 ..       3      26 .. 0.84
   2 ?    9.3   0.0   0.00047      0.79      15      24 ..      53      62 ..      45      62 .. 0.86
   3 ?   -2.9   0.0       3.1   5.4e+03      15      24 ..      98     107 ..      98     107 .. 0.81
   4 ?   -0.9   0.1      0.71   1.2e+03      23      38 ..     155     168 ..     151     168 .. 0.73

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.011
                 EE-----EEEEE CS
    PF07676.7 15 awSPDGkkivFt 26
                 awSPD ++++ +
  MMETSP1325-20131115|10735_1  6 AWSPDSTMLAIA 17
                 8******99976 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00047
                 EE-----EEE CS
    PF07676.7 15 awSPDGkkiv 24
                 awSPDG++++
  MMETSP1325-20131115|10735_1 53 AWSPDGSTLA 62
                 9*******97 PP

  == domain 3    score: -2.9 bits;  conditional E-value: 3.1
                  EE-----EEE CS
    PF07676.7  15 awSPDGkkiv 24 
                  awS  G+ ++
  MMETSP1325-20131115|10735_1  98 AWSASGNLLA 107
                  79*9998775 PP

  == domain 4    score: -0.9 bits;  conditional E-value: 0.71
                  EEEEE-BT..TB-EEE CS
    PF07676.7  23 ivFtSnRgdrGspdiy 38 
                  i++t   +  G ++i+
  MMETSP1325-20131115|10735_1 155 IIYTTGFD--GAFHIW 168
                  55666555..999999 PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2    0.0025       4.3     218     260 ..      49      86 ..      38     142 .. 0.73
   2 ?    5.9   0.0    0.0016       2.7     231     261 ..     153     188 ..     135     231 .. 0.77

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0025
    PF11715.3 218 aasldvsssevegqtfvftlsrDgkLRvWnletgqclrttdil 260
                  a++++ s+   +g+t +++  +Dg++++W+ + +   + td l
  MMETSP1325-20131115|10735_1  49 AVAVAWSP---DGST-LASAGLDGTVKIWDADSRRW-KCTDTL 86 
                  55666666...4444.55999*********987754.444444 PP

  == domain 2    score: 5.9 bits;  conditional E-value: 0.0016
    PF11715.3 231 qtfvftlsrDgkLRvWnletgqclrttdil.....e 261
                  +++++t   Dg   +W+++tgq+l+t+ ++     +
  MMETSP1325-20131115|10735_1 153 DGIIYTTGFDGAFHIWDTTTGQNLKTVSLRvgsgyD 188
                  5677888889999*************9999555552 PP

>> PF11768.3  Protein of unknown function (DUF3312)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.1   0.00051      0.87     303     329 ..       4      30 ..       1      33 [. 0.93
   2 ?    2.2   0.0     0.021        35     262     328 ..      50     121 ..      46     140 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00051
    PF11768.3 303 lvawhpdsaillvasekgelqvFDiaL 329
                   vaw pds++l +a + g + ++D+a+
  MMETSP1325-20131115|10735_1   4 SVAWSPDSTMLAIALADGAIEIWDVAV 30 
                  79***********************96 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.021
    PF11768.3 262 vsnalspdeekLllGceDsslvLydeer...kvt..llakaelvPelvawhpdsaillvasekgelqvFDia 328
                  v++a spd   L     D+++ ++d++    k t  l   a+l    vaw +++ +l   +  g+lq++D +
  MMETSP1325-20131115|10735_1  50 VAVAWSPDGSTLASAGLDGTVKIWDADSrrwKCTdtLDLGAKLGEPPVAWSASGNLLATINYYGQLQIWDSS 121
                  667778888888888888888888865311234431334567777789********************9965 PP

>> PF12657.2  Transcription factor IIIC subunit delta N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.15   2.5e+02      95     123 ..       4      26 ..       2      31 .. 0.58
   2 ?    8.2   0.1   0.00086       1.5      91     136 ..      47      82 ..      33      88 .. 0.80
   3 ?    0.6   0.0      0.18   3.1e+02     107     126 ..     102     121 ..      95     143 .. 0.78

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.15
    PF12657.2  95 avaWSPsgLakngrClLavLttnlrlsly 123
                  +vaWSP       + +La+  ++++++++
  MMETSP1325-20131115|10735_1   4 SVAWSP------DSTMLAIALADGAIEIW 26 
                  466666......34455555555555555 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00086
    PF12657.2  91 shvravaWSPsgLakngrClLavLttnlrlslyapvgneekgkWte 136
                  + ++avaWSP       ++ La    +++++++++     + +W +
  MMETSP1325-20131115|10735_1  47 GSAVAVAWSP------DGSTLASAGLDGTVKIWDAD----SRRWKC 82 
                  47899*****......67899999999999999999....677765 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.18
    PF12657.2 107 grClLavLttnlrlslyapv 126
                  ++ lLa  +  ++l++++++
  MMETSP1325-20131115|10735_1 102 SGNLLATINYYGQLQIWDSS 121
                  56689999999999999977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.50
# Mc/sec: 1155.04
//
Query:       MMETSP1325-20131115|10734_1  [L=419]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-24   85.2  35.2    1.4e-14   53.6   3.3    4.0  4  PF01485.16 IBR domain


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1     0.015   2.1e+02      19      31 ..      20      32 ..       3      36 .. 0.72
   2 !   53.6   3.3   9.9e-19   1.4e-14       2      64 .]      94     156 ..      93     156 .. 0.96
   3 !   39.9  10.3   1.9e-14   2.6e-10      18      59 ..     173     219 ..     158     229 .. 0.77
   4 ?   -1.0   0.0       0.1   1.4e+03      39      46 ..     407     419 .]     370     419 .] 0.73

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.015
   PF01485.16 19 kwCprpdCeaiie 31
                 + Cp+ +C++ + 
  MMETSP1325-20131115|10734_1 20 TTCPEHKCSTLVP 32
                 58******99875 PP

  == domain 2    score: 53.6 bits;  conditional E-value: 9.9e-19
   PF01485.16   2 kyeklklkkylesekelkwCprpdCeaiiekekgakkssvtCsk..CgfefCflCkkewHeglsC 64 
                  +y ++ ++++++s+ +++wCp+p+C++ii++ +g ++  v+C    Cg++fCf+C++e+H++  C
  MMETSP1325-20131115|10734_1  94 RYSQMIVQQFVNSNSQMRWCPGPGCNKIIQAGDGVAN--VKCGPggCGCAFCFRCGEEAHAPTAC 156
                  899**********************************..***9666****************999 PP

  == domain 3    score: 39.9 bits;  conditional E-value: 1.9e-14
   PF01485.16  18 l.......kwCprpdCeaiiekekgakkssvtCskCgfefCflCkkew..H 59 
                  +       k Cp+  C++ iek++g+++  + Cs+C++efC+ C+ +w  H
  MMETSP1325-20131115|10734_1 173 AnwilantKRCPK--CQTRIEKNQGCNH--MSCSQCKYEFCWMCMGDWkdH 219
                  1444554369*77..*************..******************444 PP

  == domain 4    score: -1.0 bits;  conditional E-value: 0.1
   PF01485.16  39 s.....svtCskC 46 
                  s      v+C+kC
  MMETSP1325-20131115|10734_1 407 SssmaaEVKCQKC 419
                  1445556999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1223  (0.0894529); expected 273.4 (0.02)
Passed bias filter:                      466  (0.0340843); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.52s 00:00:01.21 Elapsed: 00:00:00.57
# Mc/sec: 1731.16
//
Query:       MMETSP1325-20131115|10736_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.45s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 421.58
//
Query:       MMETSP1325-20131115|10737_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.44s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|10739_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-11   43.3   4.7    2.3e-11   43.2   3.2    1.0  1  PF00033.14 Cytochrome b(N-terminal)/b6/petB
    4.3e-09   35.9   3.7    4.7e-09   35.7   2.6    1.0  1  PF01292.15 Prokaryotic cytochrome b561


Domain annotation for each model (and alignments):
>> PF00033.14  Cytochrome b(N-terminal)/b6/petB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   3.2   3.4e-15   2.3e-11     103     185 ..       4      94 ..       1      97 [. 0.96

  Alignments for each domain:
  == domain 1    score: 43.2 bits;  conditional E-value: 3.4e-15
   PF00033.14 103 nplqklvylalylllvvliltGlll........vslavealpplllddkglaelarelHfllayllllfvvlHiaaallhhlvgkgllram 185
                  + ++ + ++a+y+++ v+++tG+++        + +++ +  p+++++   a  a+++H+ +++++  f +lH+ a+ +h  +g+++l +m
  MMETSP1325-20131115|10739_1   4 KTMADASHYAMYGFITVMPVTGFAMglfnggkgIPFFGLYTIPGFEKNGTIAGTAFKIHKQAGLAMEYFTMLHVSAVGYHLMRGHPILYRM 94 
                  6789999**************************999999*******************************************999999999 PP

>> PF01292.15  Prokaryotic cytochrome b561
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   2.6   6.9e-13   4.7e-09     103     179 ..       9      94 ..       2      97 .. 0.88

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 6.9e-13
   PF01292.15 103 lvhlllyvllvvliltGllmsf....aatagfpll.....lddkggaqlareiHellaaallafvvlHiaaallhhlvkkdtlrrM 179
                  + h+++y ++ v+++tG++m      +  ++f+l+     ++++ +a +a  iH+ ++ a+  f +lH++a+ +h  +++++l rM
  MMETSP1325-20131115|10739_1   9 ASHYAMYGFITVMPVTGFAMGLfnggKGIPFFGLYtipgfEKNGTIAGTAFKIHKQAGLAMEYFTMLHVSAVGYHLMRGHPILYRM 94 
                  479*****************879777666677777*******************88888888****************99999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|10741_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.32   10.8   5.0       0.46   10.3   3.4    1.2  1  PF03025.9 Papillomavirus E5


Domain annotation for each model (and alignments):
>> PF03025.9  Papillomavirus E5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.4   3.3e-05      0.46      13      61 ..      27      77 ..      24      79 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 3.3e-05
    PF03025.9 13 lllcllv.pLllsvsvyaallllvlvlwvvvtsplevFlvy..llflylPll 61
                 lll  lv pLll+    a +++  +  w  v+s  ++F ++  l+fl+lP++
  MMETSP1325-20131115|10741_1 27 LLLVTLVpPLLLALA-LAFTWVAQVKKWKSVGSMSTTFSMWltLIFLVLPVI 77
                 455566659999886.699*******************98722578888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       670  (0.0490053); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 380.60
//
Query:       MMETSP1325-20131115|10743_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-30  102.6   2.6    6.6e-13   48.7   0.2    3.0  3  PF08238.7  Sel1 repeat
     0.0057   16.2   0.2        1.5    8.6   0.0    2.7  2  PF13176.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.4   0.7        2.7    7.9   0.1    2.1  2  PF12688.2  Tetratrico peptide repeat
      0.024   14.1   8.4         37    4.0   0.0    4.9  5  PF00515.23 Tetratricopeptide repeat
      0.025   14.1   1.9       0.18   11.3   0.9    2.4  2  PF13414.1  TPR repeat
      0.043   14.3   0.0        5.1    7.9   0.0    2.3  2  PF13428.1  Tetratricopeptide repeat
        0.1   13.0   0.0         10    6.5   0.0    2.1  2  PF14226.1  non-haem dioxygenase in morphine synthesis N-terminal
       0.17   12.4   1.1         12    6.9   0.2    2.6  2  PF02071.15 Aromatic-di-Alanine (AdAR) repeat
        2.3    8.2   5.6         43    4.2   0.1    3.8  5  PF07719.12 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.2   4.4e-16   6.6e-13       1      39 []       4      39 ..       4      39 .. 0.95
   2 !   47.2   0.0   1.3e-15   1.9e-12       1      39 []      40      75 ..      40      75 .. 0.95
   3 ?    5.9   0.0     0.012        18       1      13 [.      76      86 .]      76      86 .] 0.77

  Alignments for each domain:
  == domain 1    score: 48.7 bits;  conditional E-value: 4.4e-16
    PF08238.7  1 aeAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 ++Aq+nLG   my+nG+ Gvp+d  kA+ +yekAA+qG+
  MMETSP1325-20131115|10743_1  4 SRAQCNLG--FMYMNGQ-GVPQDNHKAVDLYEKAAAQGN 39
                 58******..8889***.9*******************8 PP

  == domain 2    score: 47.2 bits;  conditional E-value: 1.3e-15
    PF08238.7  1 aeAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 ++Aq+nLG   my++G+ Gvp+ ++kA+e+y+kA +qG+
  MMETSP1325-20131115|10743_1 40 SRAQCNLG--FMYETGR-GVPQSDSKAVELYQKASDQGN 75
                 58******..999***9.9*******************8 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.012
    PF08238.7  1 aeAqynLGlyymy 13
                 ++Aq+nLG   my
  MMETSP1325-20131115|10743_1 76 SRAQCNLG--FMY 86
                 58******..444 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00099       1.5       4      29 ..       9      36 ..       6      43 .. 0.72
   2 !    5.6   0.0    0.0095        14      16      27 ..      61      70 ..      42      79 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00099
    PF13176.1  4 nLarlysr....lgdyekAielyeraLalt 29
                 nL+ +y++     +d  kA++lye+  a +
  MMETSP1325-20131115|10743_1  9 NLGFMYMNgqgvPQDNHKAVDLYEK--AAA 36
                 56666666666668999********..444 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0095
    PF13176.1 16 ekAielyeraLa 27
                 +kA+ely++  a
  MMETSP1325-20131115|10743_1 61 SKAVELYQK--A 70
                 69******9..5 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1    0.0017       2.7      17      35 ..      24      42 ..      18      47 .. 0.84
   2 ?    6.2   0.0    0.0057       8.7      17      35 ..      60      78 ..      47      82 .. 0.83

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0017
    PF12688.2 17 eakAvplYrrAlaaGLaga 35
                 ++kAv+lY++A a+G + a
  MMETSP1325-20131115|10743_1 24 NHKAVDLYEKAAAQGNSRA 42
                 689***********97655 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0057
    PF12688.2 17 eakAvplYrrAlaaGLaga 35
                 + kAv+lY++A ++G + a
  MMETSP1325-20131115|10743_1 60 DSKAVELYQKASDQGNSRA 78
                 679***********97655 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.024        37       2      13 ..       5      16 ..       4      17 .. 0.87
   2 ?    3.7   0.2      0.03        46      18      27 ..      25      34 ..      22      37 .. 0.85
   3 ?    2.6   0.0     0.066     1e+02       2      12 ..      41      51 ..      40      52 .. 0.86
   4 ?    3.9   0.0     0.026        40      19      27 ..      62      70 ..      61      72 .. 0.91
   5 ?    1.6   0.0      0.14   2.2e+02       2      11 ..      77      86 .]      76      86 .] 0.86

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.024
                 HHHHHHHHHHHH CS
   PF00515.23  2 kalynlGnaylk 13
                 +a +nlG +y++
  MMETSP1325-20131115|10743_1  5 RAQCNLGFMYMN 16
                 799*******85 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.03
                 HHHHHHHHHH CS
   PF00515.23 18 deAleyyekA 27
                  +A++ yekA
  MMETSP1325-20131115|10743_1 25 HKAVDLYEKA 34
                 59*******9 PP

  == domain 3    score: 2.6 bits;  conditional E-value: 0.066
                 HHHHHHHHHHH CS
   PF00515.23  2 kalynlGnayl 12
                 +a +nlG +y 
  MMETSP1325-20131115|10743_1 41 RAQCNLGFMYE 51
                 799****9995 PP

  == domain 4    score: 3.9 bits;  conditional E-value: 0.026
                 HHHHHHHHH CS
   PF00515.23 19 eAleyyekA 27
                 +A+e y+kA
  MMETSP1325-20131115|10743_1 62 KAVELYQKA 70
                 8*******9 PP

  == domain 5    score: 1.6 bits;  conditional E-value: 0.14
                 HHHHHHHHHH CS
   PF00515.23  2 kalynlGnay 11
                 +a +nlG +y
  MMETSP1325-20131115|10743_1 77 RAQCNLGFMY 86
                 799****988 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.9   0.00012      0.18       7      64 ..       8      70 ..       2      73 .. 0.75
   2 ?    3.7   0.0     0.028        42      21      41 ..      62      80 ..      58      86 .] 0.68

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00012
    PF13414.1  7 kelGnalfkeg....dydeAieayekAleldpnnaelyynlAlaylklg....kdyeeAledyekA 64
                  +lG ++++ +    d ++A+++yekA +    n  + +nl+  y+  g    + + +A+e y+kA
  MMETSP1325-20131115|10743_1  8 CNLGFMYMNGQgvpqDNHKAVDLYEKAAAQG--NSRAQCNLGFMYET-GrgvpQSDSKAVELYQKA 70
                 5666666664435558899********9987..68999999999998.645665667999999998 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.028
    PF13414.1 21 eAieayekAleldpnnaelyy 41
                 +A+e+y+kA +   + a   +
  MMETSP1325-20131115|10743_1 62 KAVELYQKASDQGNSRA--QC 80
                 89999999987664443..33 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0033       5.1      18      42 ..      25      47 ..       4      49 .. 0.77
   2 ?    4.7   0.0     0.034        52      19      42 ..      62      83 ..      58      85 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0033
    PF13428.1 18 deAiallrralalaPddaealllLa 42
                  +A++l+++a+a++  + +a+ +L+
  MMETSP1325-20131115|10743_1 25 HKAVDLYEKAAAQG--NSRAQCNLG 47
                 57********7655..566666665 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.034
    PF13428.1 19 eAiallrralalaPddaealllLa 42
                 +A++l+++a   + ++ +a+ +L+
  MMETSP1325-20131115|10743_1 62 KAVELYQKA--SDQGNSRAQCNLG 83
                 79*******..6677788888777 PP

>> PF14226.1  non-haem dioxygenase in morphine synthesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0069        10      23      44 ..       6      27 ..       4      39 .. 0.80
   2 ?    5.1   0.0     0.018        28      22      45 ..      41      64 ..      29      74 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0069
    PF14226.1 23 AceevGffqvvnhgvpeeliee 44
                 A  + Gf++  + gvp++  + 
  MMETSP1325-20131115|10743_1  6 AQCNLGFMYMNGQGVPQDNHKA 27
                 55689***********986654 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.018
    PF14226.1 22 eAceevGffqvvnhgvpeelieev 45
                 +A  + Gf++ ++ gvp+++ + v
  MMETSP1325-20131115|10743_1 41 RAQCNLGFMYETGRGVPQSDSKAV 64
                 677789***********9876665 PP

>> PF02071.15  Aromatic-di-Alanine (AdAR) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2    0.0076        12       1       9 [.      27      35 ..      27      36 .. 0.91
   2 ?    3.7   0.0      0.09   1.4e+02       1      10 [.      63      72 ..      63      72 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0076
   PF02071.15  1 AakhyeqAa 9 
                 A ++ye+Aa
  MMETSP1325-20131115|10743_1 27 AVDLYEKAA 35
                 899*****9 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.09
   PF02071.15  1 AakhyeqAae 10
                 A ++y++A++
  MMETSP1325-20131115|10743_1 63 AVELYQKASD 72
                 789*****85 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.33     5e+02       2      13 ..       5      16 ..       4      18 .. 0.84
   2 ?    4.2   0.1     0.028        43      18      29 ..      25      36 ..      22      38 .. 0.83
   3 ?   -1.0   0.0       1.3     2e+03       2      11 ..      41      50 ..      40      52 .. 0.79
   4 ?    3.0   0.0     0.069   1.1e+02      19      27 ..      62      70 ..      60      73 .. 0.88
   5 ?   -2.0   0.0       2.8   4.3e+03       2      11 ..      77      86 .]      76      86 .] 0.75

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHH CS
   PF07719.12  2 ealynlGlayyk 13
                 +a +nlG  y++
  MMETSP1325-20131115|10743_1  5 RAQCNLGFMYMN 16
                 5789****9996 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.028
                 HHHHHHHHHHHH CS
   PF07719.12 18 eeAleafekAle 29
                  +A++++ekA +
  MMETSP1325-20131115|10743_1 25 HKAVDLYEKAAA 36
                 69*******975 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 1.3
                 HHHHHHHHHH CS
   PF07719.12  2 ealynlGlay 11
                 +a +nlG  y
  MMETSP1325-20131115|10743_1 41 RAQCNLGFMY 50
                 5789999988 PP

  == domain 4    score: 3.0 bits;  conditional E-value: 0.069
                 HHHHHHHHH CS
   PF07719.12 19 eAleafekA 27
                 +A+e+++kA
  MMETSP1325-20131115|10743_1 62 KAVELYQKA 70
                 89*****99 PP

  == domain 5    score: -2.0 bits;  conditional E-value: 2.8
                 HHHHHHHHHH CS
   PF07719.12  2 ealynlGlay 11
                 +a +nlG  y
  MMETSP1325-20131115|10743_1 77 RAQCNLGFMY 86
                 5778999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 420.59
//
Query:       MMETSP1325-20131115|10742_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 742.40
//
Query:       MMETSP1325-20131115|10745_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 281.11
//
Query:       MMETSP1325-20131115|10746_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|10748_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-08   32.1   0.0    7.9e-08   31.5   0.0    1.2  1  PF00255.14 Glutathione peroxidase


Domain annotation for each model (and alignments):
>> PF00255.14  Glutathione peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   5.8e-12   7.9e-08      37     107 ..      12      85 ..       4      86 .. 0.79

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 5.8e-12
                  HHHHHHHHHHHHHTT---EEEEEE---------S-HHH.....HHHHHHHH----SEEB---------S-HHHHHH CS
   PF00255.14  37 eqykeleelqekykekglvilgFPCnqFgkqepgenee.....lkevragkyevtfellekievnGekedplykfl 107
                  +qy  l  l++ky   gl+il+FP +q    ep+  e      l+++  g++ +   +++k+++ G+ ++pl+++l
  MMETSP1325-20131115|10748_1  12 KQYPALAYLNKKYYADGLRILAFPTDQGW-YEPEVSEIvrqraLQTFGFGQF-PYAVVFDKVDILGSTSHPLFNYL 85 
                  69*************************43.3443333312333777777776.55679*****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 977.34
//
Query:       MMETSP1325-20131115|10744_1  [L=327]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-08   32.6   0.1    1.1e-07   31.3   0.1    1.7  1  PF00458.15 WHEP-TRS domain


Domain annotation for each model (and alignments):
>> PF00458.15  WHEP-TRS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.1   7.8e-12   1.1e-07       1      39 [.     284     324 ..     284     326 .. 0.86

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 7.8e-12
                  HHHHHHH---HHHHHH-----HH..HHHHHHHHHHHHHHHH CS
   PF00458.15   1 LeeaiaaQGdlVRkLKaekapke..dvdaaVakLLaLKkey 39 
                  +eea+++QG++VR+LK+ +  +   +v +aV++LL LK+ +
  MMETSP1325-20131115|10744_1 284 IEEAVEKQGNVVRALKEGGLGNKdpEVMEAVEELLRLKSML 324
                  689**************986555337************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       476  (0.0348157); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1506.94
//
Query:       MMETSP1325-20131115|10751_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 708.01
//
Query:       MMETSP1325-20131115|10749_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.8e-18   63.9   0.1    1.3e-17   63.5   0.1    1.1  1  PF05328.7 CybS


Domain annotation for each model (and alignments):
>> PF05328.7  CybS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.1   9.6e-22   1.3e-17      29     129 ..      30     132 ..       8     134 .. 0.89

  Alignments for each domain:
  == domain 1    score: 63.5 bits;  conditional E-value: 9.6e-22
                  TTHHHHHHHHHHHHHHHH---HHHHHH-....---HHHHHHHHHHHH--------HHHHH--....-HHHHHHH---HHHHHHHH---HHHHHH----HHHHH CS
    PF05328.7  29 ksegsyhwtleRilavallpltpaplla.gs.espvlDallaaalllhshlgfesviiDYipkrvygklhklakyllyllsaltlvGlyeletndvGltelvk 129
                  +  gs+  ++  ++++al+pltpa++l   s ++  +D +l +++ +h+h+g++ v +DY++k   + +   a+y++ +++++t++Gl++l+ +  G+te v 
  MMETSP1325-20131115|10749_1  30 DGRGSLATKYYHYTSMALIPLTPAAFLLsPSpMCMPVDLALGIVIPIHAHIGMNYVMTDYVKKFIGKGAVGPARYIMLGATGVTMAGLLKLNLTGPGVTESVX 132
                  56789999999*****************322246669*************************8888899999***************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 948.35
//
Query:       MMETSP1325-20131115|10754_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-21   75.5   0.3    4.1e-21   74.7   0.2    1.4  1  PF12327.3  FtsZ family, C-terminal domain
    1.8e-08   33.8   0.6    3.5e-08   32.9   0.4    1.5  1  PF00627.26 UBA/TS-N domain
     0.0093   15.3   0.1      0.016   14.5   0.0    1.4  1  PF02037.22 SAP domain
  ------ inclusion threshold ------
       0.34    9.8   3.7       0.41    9.6   2.5    1.1  1  PF01690.12 Potato leaf roll virus readthrough protein


Domain annotation for each model (and alignments):
>> PF12327.3  FtsZ family, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.2   1.2e-24   4.1e-21      16      95 .]       1      82 [.       1      82 [. 0.95

  Alignments for each domain:
  == domain 1    score: 74.7 bits;  conditional E-value: 1.2e-24
                 HHHHHHHHHTSGGGT---------EEEEEE--------TTT---HHHHHS-TTS--B---EE-TT--..S-BEEEEEB---- CS
    PF12327.3 16 aeeaaeaaisspLLdvdlsgAkgvlvnitggsdltleEveevaeeireevdeeanvivGasideele..deirvtvvatGie 95
                 a+ aa++a++spLL++dl  A+g+++ni gg+d+tl E+ ++ e i+ ++d+ean+i+G+ +de+ +  + i vt++atG++
  MMETSP1325-20131115|10754_1  1 AKLAAQRAVASPLLECDLVAATGAVFNIVGGPDMTLGEITAASEIIEAAMDPEANIIFGSLVDESRQpgGDITVTMIATGFD 82
                 5679***********************************************************98764489*********96 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.4     1e-11   3.5e-08       2      37 .]     129     165 ..     128     165 .. 0.96

  Alignments for each domain:
  == domain 1    score: 32.9 bits;  conditional E-value: 1e-11
                  THHHHHHHHH-.---HHHHHHHHHHTTTSHHHHHHHH CS
   PF00627.26   2 deeaiqqLreM.GfsreeakkALratnnnvErAveyL 37 
                  ++++++ Lre+  + ++ +k+AL ++++++E+A e+L
  MMETSP1325-20131115|10754_1 129 SAKDVKALRELtDAAMMKCKEALAESGGDMEKAQEWL 165
                  789********99***********************9 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   4.8e-06     0.016      10      26 ..     162     178 ..     162     178 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 4.8e-06
                  HHHHHHTT------HHH CS
   PF02037.22  10 KaeLkkrGLptsGkKae 26 
                  ++ L++ GL+t+GkKa+
  MMETSP1325-20131115|10754_1 162 QEWLRAKGLSTAGKKAD 178
                  589*************8 PP

>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.5   0.00012      0.41       4      30 ..      97     120 ..      94     149 .. 0.75

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00012
   PF01690.12   4 epgPkPgPsPtPpppPqPtPePtPakk 30 
                  e +P+P+P    +  P+P+P+P+Pa++
  MMETSP1325-20131115|10754_1  97 EEPPSPTPMW--R-TPAPAPAPAPAAE 120
                  5556666554..3.5888888888755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       418  (0.0305734); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.70
# Mc/sec: 640.17
//
Query:       MMETSP1325-20131115|10750_1  [L=460]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-49  168.1   0.0    8.1e-49  166.2   0.0    1.8  2  PF00459.20 Inositol monophosphatase family
  ------ inclusion threshold ------
      0.076   12.7   0.0         14    5.4   0.0    2.5  2  PF12973.2  ChrR Cupin-like domain


Domain annotation for each model (and alignments):
>> PF00459.20  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.2   0.0   1.2e-52   8.1e-49      40     253 ..       3     232 ..       1     249 [. 0.86
   2 ?   -0.7   0.0     0.094   6.4e+02     109     140 ..     264     296 ..     255     327 .. 0.81

  Alignments for each domain:
  == domain 1    score: 166.2 bits;  conditional E-value: 1.2e-52
                  HHHHHHHHHHHHHHHHHHHHHSTTSEEEHCHHHHC--.B...---.EEEEEEEEE--HHHH------EEEEEEEETTEEEEEEEEETTTTEEEE-------EEE-EEEE----S-GGG-CCBEE--SSSSSCHHHCCCHHHHCCHHCCH..EEEBE-SHHHHHHHHH----SEEEEEE...EEBHHHH----HHHHH---EEEECSS-............S.CSS-EEEEEE CS
   PF00459.20  40 dlvtaadkaveelilealaakfpgdkilgeetlaage.kselgesgltwvvDPiDGTknFirgipqfavsiglleegkpvlGviaaPllnqlysaakgkGaflngqklkvsrapptseallatlfavssvkdtseaellekvlsavssp..gvrrvgssalklalvAeGkadayiefg...rekkWDhaAGvaiveeaGGvvtdlkge............gltllkkgviaa 253
                  d+vt++d+a e+++le ++++fp++k++gee++aa++    lg + +tw++DPiDGT nF++  p  +vsig+  +gkp +G++++P+ ++l+ +  g+Ga+lng+++++s++ ++ ++l++t   +++++d    + +e++ +++++     r +gss l+la+v +G+ada++      + k+WD +AG +i  eaG+ +  ++ +             +++ ++++i+a
  MMETSP1325-20131115|10750_1   3 DPVTETDEANERYVLEMIRERFPSQKVIGEEGCAAAGaIPPLGLE-PTWIIDPIDGTQNFVHACPLSCVSIGFCLNGKPAMGCVYDPFRDELFLGLVGQGAYLNGERISASGQTKLVSSLVLTDPGYERTPDGIG-KMMEGYTRMLHRNvqALRIIGSSVLSLAWVGCGRADAFVIGLageSGKPWDYCAGYVIASEAGASFRRIDSRsfmtqgepefssAFDIYARSCICA 232
                  9*********************************99933345777.9*******************************************************************999999999999998888877.56666666666656668********************998855789********************999998666666655555555555555555 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.094
                  EEEEETTEEEEEEEEETTTTEEEE-----.--E CS
   PF00459.20 109 iglleegkpvlGviaaPllnqlysaakgk.Gaf 140
                  ++++eeg+ v+++ia   + +++ a+ ++ G++
  MMETSP1325-20131115|10750_1 264 VAVAEEGESVASAIARMNVAEVVNASSNEtGCS 296
                  8999**********9986666555555443665 PP

>> PF12973.2  ChrR Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0021        14      25      56 ..     342     373 ..     319     377 .. 0.79
   2 ?    4.5   0.0     0.004        27      53      88 ..     398     434 ..     397     436 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0021
                  EEEEEE---------EE-----EEEEEE--B- CS
    PF12973.2  25 atslvryapgsrfpahkhpggeeilVLeGvfs 56 
                    +++ ++p+s f+ h+hp+ e    L G+++
  MMETSP1325-20131115|10750_1 342 RLQVMALKPNSWFRVHQHPNFEFEVTLAGALH 373
                  4567889*************998888888765 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.004
                  --B------B----EEE--TT-EE----.----EEEE CS
    PF12973.2  53 GvfsdeegdypaGsylrnppgsshapfs.eegctilv 88 
                  G+++  eg  p+G+ l n +gs h+ f+ e+g++ilv
  MMETSP1325-20131115|10750_1 398 GKLEFVEGCAPKGKSLVNRKGSVHQSFTkEDGAVILV 434
                  556666777899***************7356799988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.37s 00:00:01.12 Elapsed: 00:00:00.56
# Mc/sec: 1968.44
//
Query:       MMETSP1325-20131115|10755_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.61
# Mc/sec: 396.77
//
Query:       MMETSP1325-20131115|10756_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 304.15
//
Query:       MMETSP1325-20131115|10757_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-07   31.2   0.0    1.1e-07   31.2   0.0    1.4  2  PF00013.24 KH domain
    0.00082   18.8   0.5     0.0014   18.1   0.0    1.6  2  PF13014.1  KH domain
  ------ inclusion threshold ------
       0.11   12.0   0.1       0.13   11.7   0.1    1.2  1  PF07650.12 KH domain


Domain annotation for each model (and alignments):
>> PF00013.24  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   0.6         3   1.4e+04      16      20 ..      24      28 ..      24      29 .. 0.85
   2 !   31.2   0.0   2.4e-11   1.1e-07       3      55 ..      32      86 ..      30      87 .] 0.88

  Alignments for each domain:
  == domain 1    score: -4.6 bits;  conditional E-value: 3
                 --TTH CS
   PF00013.24 16 GkgGs 20
                 G+gG+
  MMETSP1325-20131115|10757_1 24 GRGGR 28
                 99997 PP

  == domain 2    score: 31.2 bits;  conditional E-value: 2.4e-11
                 EEEEECCCCHHH---TTHHHHHHHHHHT-EEEE--SE...EEEEEESHHHHHHHH CS
   PF00013.24  3 rvkvpnskigriIGkgGsnIkeIeeetgakIdvpkdr..dtvtisGdpesvekAk 55
                 ++ v ++ +  + G+gGs+ k+I + +ga  d+++++   +++i G+ ++   Ak
  MMETSP1325-20131115|10757_1 32 TIPVGREDAAFVLGRGGSTKKKIARVCGAELDLNESGdsHVIEIYGTDDQRMWAK 86
                 6777789999***********************8774589******999987776 PP

>> PF13014.1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.58   2.7e+03       7      12 ..      24      29 ..      23      33 .. 0.70
   2 !   18.1   0.0   3.1e-07    0.0014       4      43 .]      42      77 ..      40      77 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 0.58
    PF13014.1  7 GkgGet 12
                 G+gG +
  MMETSP1325-20131115|10757_1 24 GRGGRS 29
                 888875 PP

  == domain 2    score: 18.1 bits;  conditional E-value: 3.1e-07
    PF13014.1  4 liIGkgGetIkeIreetGakIrfpkeaspgsnereitIrG 43
                 ++ G+gG+t k+I + +Ga  +  +    + ++ +i+I G
  MMETSP1325-20131115|10757_1 42 FVLGRGGSTKKKIARVCGAELDLNE----SGDSHVIEIYG 77
                 799********************99....33445666665 PP

>> PF07650.12  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   2.8e-05      0.13      27      62 ..      31      66 ..       9      77 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.8e-05
                 EEEEEEESCCCCC------HHHHHHHHHHHHCHHC- CS
   PF07650.12 27 viiviresqpgivIGkgGsnikklgkelrkriekle 62
                  +i +  ++ + v+G+gGs+ kk+    + ++++ e
  MMETSP1325-20131115|10757_1 31 ETIPVGREDAAFVLGRGGSTKKKIARVCGAELDLNE 66
                 555566677889************998888886555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 365.76
//
Query:       MMETSP1325-20131115|10758_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.3e-11   40.9   0.2    1.2e-10   40.5   0.2    1.0  1  PF10271.4 Putative transmembrane protein


Domain annotation for each model (and alignments):
>> PF10271.4  Putative transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.2   8.7e-15   1.2e-10     230     393 ..       7     174 ..       4     189 .. 0.83

  Alignments for each domain:
  == domain 1    score: 40.5 bits;  conditional E-value: 8.7e-15
    PF10271.4 230 ikevlftsllsAyyvaflPlvfvkstvyydkvwscehlil.vllsafvllvayllPlkYcDllHraalHLGkWqklehalssnaaqhvWsestiypqGvlVrhskelYkavgsynv.AiPsdv.sHarFyflfk.....kplrllnillalelalvlyqlyslllseeWqhv 393
                  ++ vlf +l   yy+++lPl+f + + +y  +  c ++il  ++++ +ll ++++  + + l+  +   +G W + +     ++++  W    +y++ ++V + +  + a+g+ +    P+d    + ++  ++     k  r+l +l   ++ ++l q+++ + s +W   
  MMETSP1325-20131115|10758_1   7 FRTVLFRALEGTYYTTVLPLLFQEDKFLYYDRLVCGLVILyTFVGSTILLSTHCFLQNRMPLVFES-RNIGAWARCS---KPATPAEQWHRGSLYGKAMVVEYRGAWWEALGVDSTkSAPGDFfASVAYHSWLDesgpiKTSRVLLLLGGSQSIVLLTQVVLAVYSPQWSPF 174
                  689*********************8877666777777665278999999*************9987.579******9...6788999*************************987658999972456777777633333457899999999******************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1129.71
//
Query:       MMETSP1325-20131115|10759_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0002   20.8   0.0    0.00089   18.7   0.0    2.1  2  PF08239.6 Bacterial SH3 domain
  ------ inclusion threshold ------
        0.1   12.0   0.3        1.7    8.1   0.0    2.8  3  PF06347.8 Bacterial SH3 domain
       0.25   11.8   7.0       0.42   11.1   4.9    1.4  1  PF11942.3 Spt5 transcription elongation factor, acidic N-terminal


Domain annotation for each model (and alignments):
>> PF08239.6  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0     2e-07   0.00089       2      39 ..      17      54 ..      16      58 .. 0.94
   2 ?   -2.2   0.0      0.67   3.1e+03      10      25 ..     170     185 ..     169     186 .. 0.82

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 2e-07
    PF08239.6  2 nLNVRsgpgtsskvigqlpkGekvtvlgeengWykiey 39
                 +L VR+ p+   +vig +p    ++v+  +++W+ + y
  MMETSP1325-20131115|10759_1 17 VLKVRERPSATAPVIGGVPTYHAIEVTVSSGDWCMVFY 54
                 799********************************977 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.67
    PF08239.6  10 gtsskvigqlpkGekv 25 
                  + s +v+  l+ Ge++
  MMETSP1325-20131115|10759_1 170 EASADVVAHLKDGEEL 185
                  56889999***99976 PP

>> PF06347.8  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00038       1.7       6      39 ..      19      52 ..      14      56 .. 0.90
   2 ?    0.4   0.0     0.091   4.2e+02      15      31 ..      63      79 ..      60      81 .. 0.78
   3 ?   -2.4   0.0       0.7   3.2e+03      13      24 ..     171     182 ..     167     183 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00038
    PF06347.8  6 nlrkgPspkakViaylepgvpvevvkckenWcrv 39
                  +r +Ps++a+Vi  +      ev+ + ++Wc v
  MMETSP1325-20131115|10759_1 19 KVRERPSATAPVIGGVPTYHAIEVTVSSGDWCMV 52
                 69******************************76 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.091
    PF06347.8 15 akViaylepgvpvevvk 31
                  +  a++++g++++ ++
  MMETSP1325-20131115|10759_1 63 NPLKAEVKEGWMLTRTA 79
                 56679999999998775 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 0.7
    PF06347.8  13 pkakViaylepg 24 
                  + a V+a+l++g
  MMETSP1325-20131115|10759_1 171 ASADVVAHLKDG 182
                  467788888876 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   4.9   9.2e-05      0.42       5      69 ..     114     172 ..     112     199 .. 0.60

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 9.2e-05
    PF11942.3   5 EAevddeeeEeeeeedeeeelseeaefieeaeddrrhreldrrrekeeeedaeelaevlklekrY 69 
                  EA  dde +  e   +  +e+++    i+  e+d+ +++  ++re +e+e+ae+l+ +l +++  
  MMETSP1325-20131115|10759_1 114 EAGTDDEGDSGE---ELSPEEAKARRKIKR-ENDKIRMR--KQREAQEKEMAEKLESRLAIAEAS 172
                  555555544444...345555555555533.45555555..7888888889*****999776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       945  (0.0691194); expected 273.4 (0.02)
Passed bias filter:                      552  (0.0403745); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.53
# Mc/sec: 1048.97
//
Query:       MMETSP1325-20131115|10762_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   13.5   7.3      0.024   13.5   4.6    1.3  1  PF01545.16 Cation efflux family
          1    7.9   9.1        1.4    7.5   6.3    1.1  1  PF10337.4  Protein of unknown function (DUF2422)


Domain annotation for each model (and alignments):
>> PF01545.16  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   4.6   3.5e-06     0.024      71     161 ..      34     136 ..      25     141 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.5e-06
   PF01545.16  71 alvnsvlllflavfillesierliep..........heidapei.alg.v.alisllvnlllalllrragrksskrssalravalhvlgdalgslgvlvaalli 161
                  a  n+++++++av  +++++ r i             + ++++i +l    ++i+++vn  +a++++r g ++ k   a +++  hv g  +g ++v+++a+++
  MMETSP1325-20131115|10762_1  34 ACGNTIAFMIAAVCSIITAVFRAIGIafwifmintfWHFMPGWItLLFiSnLMIGIAVNATVAFFCFR-GGCCDKTHVAPQNASVHVQGAQMGQMTVVTGAVVV 136
                  55678888888888888888888888888888777755555555333334799***************.55555566666********************9986 PP

>> PF10337.4  Protein of unknown function (DUF2422)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.3    0.0002       1.4     113     184 ..      25      95 ..      18      99 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0002
    PF10337.4 113 tssaslaacaqeqvfdGkyldarvsaVyavllfvfiyfvgrlraknpkfalgvIfgiIaanvfltygpllPt 184
                   +s++l  ca  +   ++++ a +s+++av+  ++i f   + +++  f +g I+ +++ n++  +++  ++
  MMETSP1325-20131115|10762_1  25 GTSSALCRCACGNTI-AFMIAAVCSIITAVFRAIGIAFWIFMINTFWHFMPGWITLLFISNLMIGIAVNATV 95 
                  566667777766644.89*********************************************998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       736  (0.0538327); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 736.34
//
Query:       MMETSP1325-20131115|10763_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.70
# Mc/sec: 178.02
//
Query:       MMETSP1325-20131115|10765_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.60
# Mc/sec: 175.73
//
Query:       MMETSP1325-20131115|10767_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10769_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-15   57.7   2.1    1.1e-15   57.5   1.4    1.0  1  PF00629.18 MAM domain


Domain annotation for each model (and alignments):
>> PF00629.18  MAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   1.4   8.4e-20   1.1e-15       1     100 [.      13     107 ..      13     111 .] 0.86

  Alignments for each domain:
  == domain 1    score: 57.5 bits;  conditional E-value: 8.4e-20
                  --SSS-G---EE--------EEE-TTTS.----TT---......--EEEE---------EEEEEEEEE--SS--EEEEEEEE--SSS--EEEEEEE---- CS
   PF00629.18   1 CdFeeelCgwsqdetddldWtrvsgstptektgpssdhtlgkesghymyvetssgaegesarllspllpasssaClrFyyhmsgsevgtLnvyvreekeg 100
                  CdF+++ C+++++ + +  W r++gst +++tgp++d ++   sg+ymy ets++++ +s  + +     ++   ++F+yhm+gs++gtL +  ++++++
  MMETSP1325-20131115|10769_1  13 CDFDSDECSFTNGGN-ENAWIRQTGSTTSSSTGPTEDYSG---SGYYMYCETSTPNQASSFDMYTTDA-GADIGSFTFWYHMYGSGMGTLTIKWSTDASE 107
                  **************9.559*******************43...48**********9999888888554.344567*****************98887555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 542.85
//
Query:       MMETSP1325-20131115|10771_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   13.8   1.8       0.12   12.0   1.2    2.1  1  PF02178.14 AT hook motif


Domain annotation for each model (and alignments):
>> PF02178.14  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.2   8.5e-06      0.12       2      11 ..     103     112 ..     102     114 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.5e-06
   PF02178.14   2 rkRGRPrKaa 11 
                  +kRGRP+K +
  MMETSP1325-20131115|10771_1 103 KKRGRPVKMK 112
                  9*******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      376  (0.0275015); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|10770_1  [L=548]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.82u 0.36s 00:00:01.18 Elapsed: 00:00:00.54
# Mc/sec: 2431.86
//
Query:       MMETSP1325-20131115|10772_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|10773_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 316.32
//
Query:       MMETSP1325-20131115|10774_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-09   35.9   0.9    1.8e-07   30.6   0.1    2.5  2  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.028   12.5   0.2      0.035   12.1   0.1    1.2  1  PF11715.3  Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.1   2.6e-11   1.8e-07       6      39 .]      57      90 ..      53      90 .. 0.93
   2 !    3.6   0.0     0.009        62      13      38 ..     112     137 ..     101     138 .. 0.76

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 2.6e-11
                 EEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27  6 tlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 + + H+++V+ +a+++d+++++s+S+Dgt r+W+
  MMETSP1325-20131115|10774_1 57 SGHDHSGAVNRLAVAQDQTFFVSASADGTSRVWS 90
                 5679*****************************7 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.009
                  SEEEEEEESSSTEEEEEETTSEEEEE CS
   PF00400.27  13 pVtcvafspdgpllasgSrDgtirlW 38 
                   + + +  ++ + +a++S+ g +++W
  MMETSP1325-20131115|10774_1 112 RILDACMIDTTRSVATASDRGEVHVW 137
                  55566666667789****99****** PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   5.1e-06     0.035     207     266 ..      46      99 ..      15     141 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.1e-06
    PF11715.3 207 k........yrkarsassaaasldvsssevegqtfvftlsrDgkLRvWnletgqclrttdileaaell 266
                           +++++  s+a++ l+v +    +qtf ++ s+Dg+ RvW+++   +          ++ 
  MMETSP1325-20131115|10774_1  46 YdsapnvrqIGSGHDHSGAVNRLAVAQ----DQTFFVSASADGTSRVWSTAQLDQ----------TVT 99 
                  3455666668899999***********....******************655544..........333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 928.59
//
Query:       MMETSP1325-20131115|10775_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.4   0.0       0.04   13.3   0.0    1.5  1  PF09282.5  Mago binding
       0.15   10.4   2.7       0.16   10.3   1.9    1.2  1  PF01237.13 Oxysterol-binding protein
       0.51    9.6   6.6       0.73    9.1   4.5    1.2  1  PF04484.7  Family of unknown function (DUF566)


Domain annotation for each model (and alignments):
>> PF09282.5  Mago binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   8.8e-06      0.04       5      17 ..     116     128 ..     114     130 .. 0.95

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8.8e-06
    PF09282.5   5 IpetqRpDGsfRK 17 
                  I+ ++R DG+ RK
  MMETSP1325-20131115|10775_1 116 IEQSKRQDGTIRK 128
                  899*********9 PP

>> PF01237.13  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.9   3.5e-05      0.16     249     340 ..      56     148 ..       4     180 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 3.5e-05
                  TTTS-S------.......-G.......G.GS-TTBH..HHTTT--------HHHHHHHHHHHHHHHHHHHHHHHH----GGGSSE.EE-HHHHH CS
   PF01237.13 249 ankkpknsekvygftefaleLNeleeeleaelaptdS..rlrpdqraleegdideaeeeKqrlEekQRerrkkreekgeeykprwF.kkekdplt 340
                  a++  ++ ++++ + +  +eL   +e     l + d   r  +   a e++ +++ +e K  +E+  R+    r+  g++++++ F +    p++
  MMETSP1325-20131115|10775_1  56 AHSVIHERKRYFVMGKRKIEL--AREGTMTDLFCHDRekRRANRRAAAEDKAMKKEQERKAAIEQSKRQDGTIRKLMGKSMSKSIFpNTGSSPVK 148
                  445555666677777778888..33333346767766658888888999***********************************99655544443 PP

>> PF04484.7  Family of unknown function (DUF566)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   4.5   0.00016      0.73      34     125 ..      92     185 ..      70     195 .. 0.63

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00016
    PF04484.7  34 tassrlealnapasprssssarklsssss...eklskkkesslargllssrsvspsrasasaaasangslatssdsass.spsrsrrvtssesssn 125
                  ++++  +a+++++  +++++++++  +s+    +  k   +s +++  ++ + sp+++ +   a++++sl+t +++ ++ +p   +rv  + +++ 
  MMETSP1325-20131115|10775_1  92 KRRANRRAAAEDKAMKKEQERKAAIEQSKrqdGTIRKLMGKSMSKSIFPNTGSSPVKTGED-DAESSASLRTLQKPDPRkAPKAESRVDPQ-QPKV 185
                  2222222222222233333333333333356677788899******************999.66888899999999999777777776664.4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       953  (0.0697045); expected 273.4 (0.02)
Passed bias filter:                      521  (0.0381071); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.38s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 948.96
//
Query:       MMETSP1325-20131115|10779_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00018   21.0   0.1    0.00021   20.8   0.1    1.1  1  PF04368.8 Protein of unknown function (DUF507)
  ------ inclusion threshold ------
      0.013   14.3   0.2      0.014   14.1   0.1    1.0  1  PF04943.7 Poxvirus F11 protein
       0.12   10.8   0.0       0.17   10.2   0.0    1.2  1  PF07999.6 Retrotransposon hot spot protein


Domain annotation for each model (and alignments):
>> PF04368.8  Protein of unknown function (DUF507)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.1   4.7e-08   0.00021      29     116 ..      17     104 ..       9     122 .. 0.88

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 4.7e-08
    PF04368.8  29 seieklekeieeileedlakeraldekvreileeneeeiefeqvdrrelFrlikkklaeergvilakedrvseishkilelllkeeli 116
                   e+e+le  ++++   +  +e+  d+++r+++++   e+    v+  + Fr+  + la+e + +l+  d+++++s  + + ll++++ 
  MMETSP1325-20131115|10779_1  17 TEKEQLEVYMSAVAALKALAEESKDDAARQTISDDVAELYLDAVSIWNSFRKLCRSLAHETKAHLDLPDQLKRLSRVMEKILLDSSNT 104
                  567888889999999899999999***************************************************9998888888765 PP

>> PF04943.7  Poxvirus F11 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1     3e-06     0.014     268     363 ..      25     124 ..       4     127 .. 0.71

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 3e-06
    PF04943.7 268 giknleavskaaskakntirerllkaaiekdveellssitelydeikklas....dvsslld.....ygqtelietyilklvsrveagmkreelvenLlalrnig 363
                   ++++ a++    +  ++ ++++  ++i+ dv el+ +  +++++ +kl +    +++  ld     +    ++e+ il   s+  + +k   +v+ +++ ++ig
  MMETSP1325-20131115|10779_1  25 YMSAVAALK----ALAEESKDDAARQTISDDVAELYLDAVSIWNSFRKLCRslahETKAHLDlpdqlKRLSRVMEK-ILLDSSNTGSCSKITDIVSAMFSAQSIG 124
                  444444443....344677889999********************9997651111566777798885444555555.6777788888888899999999988887 PP

>> PF07999.6  Retrotransposon hot spot protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   3.8e-05      0.17     246     330 ..      41     120 ..      25     129 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 3.8e-05
    PF07999.6 246 ekravriiinCdeekdlkaivvWkklakaeeskpseakikveseWqeikgrikkvGPllrqileeesykrrvakieeavdeissv 330
                  +  a + i +   e  l+a+ +W+   k+  s  +e+k        ++ +++k++  ++ +il ++s ++ ++ki ++v  + s 
  MMETSP1325-20131115|10779_1  41 DDAARQTISDDVAELYLDAVSIWNSFRKLCRSLAHETK-----AHLDLPDQLKRLSRVMEKILLDSSNTGSCSKITDIVSAMFSA 120
                  555555555556677899**********9887777777.....667899******************************988654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       769  (0.0562463); expected 273.4 (0.02)
Passed bias filter:                      613  (0.0448362); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.41s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 623.05
//
Query:       MMETSP1325-20131115|10780_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.015   13.7   0.0      0.017   13.6   0.0    1.1  1  PF09818.4 Predicted ATPase of the ABC class


Domain annotation for each model (and alignments):
>> PF09818.4  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.2e-06     0.017     404     437 ..       1      34 [.       1      42 [. 0.86

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.2e-06
    PF09818.4 404 vAdtvilmeeyrpkdvtekakeiaeelptkrkee 437
                  vAd v+lm+ey + d+++ka +i +++  ++ + 
  MMETSP1325-20131115|10780_1   1 VADSVVLMDEYMAFDASKKAASISATFSYGHVQY 34 
                  79*********************99988776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.59
# Mc/sec: 288.38
//
Query:       MMETSP1325-20131115|10778_1  [L=303]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.39s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1481.83
//
Query:       MMETSP1325-20131115|10781_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.082   12.2   0.0       0.16   11.2   0.0    1.6  2  PF06267.7 Family of unknown function (DUF1028)


Domain annotation for each model (and alignments):
>> PF06267.7  Family of unknown function (DUF1028)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.2e-05      0.16      32      84 ..       9      62 ..       4      98 .. 0.88
   2 ?   -3.3   0.0      0.34   4.6e+03      57      91 ..     126     161 ..     123     167 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.2e-05
    PF06267.7 32 akagvGavatQaltnpalgpkalelleqgasaeevleellaad.eerekRQvgv 84
                 a+  +Ga+  Q +++ ++++k l+ ++  ++ ++vl+++ a++ +++e  Q+++
  MMETSP1325-20131115|10781_1  9 ASTAIGAMYRQRAASNEYKRKRLAIMRCETKMRQVLAKIRARKlRQAEFDQMMA 62
                 56789**********************************999877777777665 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 0.34
    PF06267.7  57 leqgasaeevleellaad.eerekRQvgvvdakgrt 91 
                  +++g ++e   +++++++  ++e R + ++  +g+ 
  MMETSP1325-20131115|10781_1 126 MKRGLHPELETDKMTRDTeVKEEARHFSILFNDGKY 161
                  777788887777777776456677877777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      496  (0.0362785); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 972.92
//
Query:       MMETSP1325-20131115|10782_1  [L=331]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-92  308.5   0.0    4.9e-92  308.3   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  308.3   0.0   3.6e-96   4.9e-92       2     316 .]      22     331 .]      21     331 .] 0.93

  Alignments for each domain:
  == domain 1    score: 308.3 bits;  conditional E-value: 3.6e-96
                  HHHHHHT-TT---EESSTT---EEE-TT-......----TTHHHHHHH-------TTT--------B-HHHHHHHT...T----CCHHHTT-HHHHHHHHHHH..HS--GG...GT-BSEE.EEE--..--EEEEES-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--.-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT.------ CS
   PF00632.20   2 llskellnpklglfyvyessgllypnkplsrdsdleessndnlklfkflGkligkaiyegilldlpfsraflkfll..lgkkvtledleeidpelanslkellelessteavedlaltFtieedkke..deielvelipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrksededrLPtasTCfnyLkLpdYsskeilkekLltAieegqegFels 316
                  +ls+ ++n ++glf+++++++llypn+ ++       + +++  lf flG+++gka+yeg +++ +f+++fl++l   +++  t++dl+ +d el+++l  l++++ +     dl+ltF++ ++  +  ++   vel+p+Ga+++Vtn nk++Yi++++nyll +++k q  afr+G+ e+i+ ++l++f++ el+ li+G ++ idv+dl++n++y+gg+++ ++t++ +w+++++f+ ++++++L+FvT+++r P++Gf++l+pkf+ +r+   +++LPta TCfn+LkL  Yss  ++k+kLl++i+ g  gF+ls
  MMETSP1325-20131115|10782_1  22 DLSAMAFNMDFGLFCTTPQDDLLYPNPASELI-----QGREHTMLFGFLGRILGKALYEGLTVEPKFAHFFLSYLKgnYNYLNTWHDLSTLDAELYKNLMFLKTYDGDAS---DLCLTFVVADETLPgsGSNMDVELVPGGAKMEVTNGNKRKYIERVANYLLVKRIKVQADAFRSGLAEIIDLNWLQMFNEPELQVLISGAPTAIDVDDLKQNCRYQGGFTSGDKTVQRFWKVIATFDAAQQAQLLRFVTSCQRPPPLGFEALNPKFCLQRVGGGDEKLPTAATCFNTLKLSSYSSSAVMKKKLLMSISSG-AGFDLS 331
                  6889999*******************774322.....34467799*******************************66445589*******************9987755...6******988887754444449********************************************************************99*********************************************************************99999********************************9.99**97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 1416.42
//
Query:       MMETSP1325-20131115|10786_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 394.96
//
Query:       MMETSP1325-20131115|10784_1  [L=480]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.74u 0.37s 00:00:01.10 Elapsed: 00:00:00.63
# Mc/sec: 1825.80
//
Query:       MMETSP1325-20131115|10788_1  [L=316]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-42  142.1   0.5    5.2e-15   55.4   0.0    3.5  4  PF12796.2  Ankyrin repeats (3 copies)
    1.7e-23   81.0   1.9    1.9e-06   27.2   0.0    4.4  4  PF00023.25 Ankyrin repeat
      1e-22   79.5   2.3    2.7e-09   36.8   0.4    4.4  4  PF13857.1  Ankyrin repeats (many copies)
    1.5e-20   73.0   0.1      5e-11   42.7   0.1    4.4  4  PF13637.1  Ankyrin repeats (many copies)
    1.7e-16   58.5   0.2    4.1e-05   23.2   0.0    4.7  4  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   1.1e-14   3.1e-11       3      88 ..     107     210 ..     105     211 .. 0.86
   2 !   55.4   0.0   1.9e-18   5.2e-15      22      88 ..     179     243 ..     160     244 .. 0.89
   3 !   43.9   0.0     7e-15   1.9e-11      28      89 .]     216     286 ..     211     286 .. 0.95
   4 !   16.2   0.0   3.2e-06    0.0087      26      66 ..     247     296 ..     243     305 .. 0.78

  Alignments for each domain:
  == domain 1    score: 43.3 bits;  conditional E-value: 1.1e-14
    PF12796.2   3 lAaengnlelvklLle.kgadvdl.....getpLhlAaeagnleivklLleagadvnakd............kegntpLhlAvrnghlelvklLlekgadvnlr 88 
                  ++a+ g++el++  +e +g dv       g t +++Aa ag+ e v++L+e+   + a++            k + tpL  A+r gh+++v+lLl+ ga+++ r
  MMETSP1325-20131115|10788_1 107 VVAMLGDVELMRSVFEeEGYDVLEkhkatGATTIMHAAGAGSCEGVQYLVERARMLTAEEedevpfidvgttKLNITPLDRAIRCGHIDVVELLLSMGANPSTR 210
                  67999**********87899999888888888*******************6555544445566666677789999*************************976 PP

  == domain 2    score: 55.4 bits;  conditional E-value: 1.9e-18
    PF12796.2  22 dvdlgetpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                  ++  + tpL  A++ g++++v+lLl++ga++ ++   g++pLh+A++ g+ e++ lLl++g d++ +
  MMETSP1325-20131115|10788_1 179 KL--NITPLDRAIRCGHIDVVELLLSMGANPSTRRSTGCSPLHAAAEMGRPECAVLLLDAGMDIDCT 243
                  33..489********************************************************9976 PP

  == domain 3    score: 43.9 bits;  conditional E-value: 7e-15
    PF12796.2  28 tpLhlAaeagnleivklLleagadvnakdkegntpLhlAvr.........nghlelvklLlekgadvnlrd 89 
                  +pLh+Aae+g+ e++ lLl+ag d+++++ +g t+LhlAv           g+le+v lLl +ga+ +lrd
  MMETSP1325-20131115|10788_1 216 SPLHAAAEMGRPECAVLLLDAGMDIDCTNRDGATALHLAVTddvtlfgspVGKLEVVGLLLGRGANTELRD 286
                  4*****************************************************************99987 PP

  == domain 4    score: 16.2 bits;  conditional E-value: 3.2e-06
    PF12796.2  26 getpLhlAa.........eagnleivklLleagadvnakdkegntpLhlA 66 
                  g t+LhlA+           g+le+v lLl +ga+ + +dk g+t+  +A
  MMETSP1325-20131115|10788_1 247 GATALHLAVtddvtlfgsPVGKLEVVGLLLGRGANTELRDKTGRTAYDIA 296
                  67899999766666666578888999999999999999999999997766 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.066   1.8e+02       2      23 ..     136     157 ..     135     161 .. 0.89
   2 !   27.2   0.0   6.9e-10   1.9e-06       3      29 ..     182     208 ..     181     211 .. 0.94
   3 !   25.4   0.1   2.6e-09     7e-06       2      32 ..     214     244 ..     213     245 .. 0.95
   4 !   22.4   0.0   2.3e-08   6.2e-05       1      33 []     246     287 ..     246     287 .. 0.97

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.066
                  SCBHHHHHHHTTHHHHHHHHHH CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLls 23 
                  G T  + Aa  g+ e v++L++
  MMETSP1325-20131115|10788_1 136 GATTIMHAAGAGSCEGVQYLVE 157
                  67889***************98 PP

  == domain 2    score: 27.2 bits;  conditional E-value: 6.9e-10
                  CBHHHHHHHTTHHHHHHHHHHTTSSTT CS
   PF00023.25   3 fTPLHlAalrgnlevvklLlsqGAdln 29 
                   TPL  A+++g+++vv+lLls GA++ 
  MMETSP1325-20131115|10788_1 182 ITPLDRAIRCGHIDVVELLLSMGANPS 208
                  6************************96 PP

  == domain 3    score: 25.4 bits;  conditional E-value: 2.6e-09
                  SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                  G++PLH Aa++g++e++ lLl++G d++ ++
  MMETSP1325-20131115|10788_1 214 GCSPLHAAAEMGRPECAVLLLDAGMDIDCTN 244
                  99*************************9887 PP

  == domain 4    score: 22.4 bits;  conditional E-value: 2.3e-08
                  TSCBHHHHHHHTT.........HHHHHHHHHHTTSSTTHBHT CS
   PF00023.25   1 dGfTPLHlAalrg.........nlevvklLlsqGAdlnaqdd 33 
                  dG T+LHlA+  +          levv lLl++GA+  ++d+
  MMETSP1325-20131115|10788_1 246 DGATALHLAVTDDvtlfgspvgKLEVVGLLLGRGANTELRDK 287
                  8***********************************999986 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00044       1.2      16      37 ..     136     157 ..     128     168 .. 0.84
   2 !   25.7   0.0   3.1e-09   8.6e-06      18      56 .]     183     221 ..     175     221 .. 0.94
   3 !   36.8   0.4   9.9e-13   2.7e-09       1      56 []     200     254 ..     200     254 .. 0.93
   4 !   17.6   0.0   1.1e-06     0.003      27      56 .]     267     296 ..     266     296 .. 0.95

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00044
    PF13857.1  16 gntpLhlAakggalevvrlLla 37 
                  g t ++ Aa +g+ e v++L++
  MMETSP1325-20131115|10788_1 136 GATTIMHAAGAGSCEGVQYLVE 157
                  6699****************93 PP

  == domain 2    score: 25.7 bits;  conditional E-value: 3.1e-09
    PF13857.1  18 tpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                  tpL  A+++g+ +vv+lLl  ga++ +r s g+++l+ A
  MMETSP1325-20131115|10788_1 183 TPLDRAIRCGHIDVVELLLSMGANPSTRRSTGCSPLHAA 221
                  9***********************************987 PP

  == domain 3    score: 36.8 bits;  conditional E-value: 9.9e-13
    PF13857.1   1 Llehg.padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                  Ll+ g +++  ++ ++  +pLh Aa+ g++e++ lLl++g d+++++ dg tal+lA
  MMETSP1325-20131115|10788_1 200 LLSMGaNPSTRRSTGC--SPLHAAAEMGRPECAVLLLDAGMDIDCTNRDGATALHLA 254
                  8999977777777777..*************************************99 PP

  == domain 4    score: 17.6 bits;  conditional E-value: 1.1e-06
    PF13857.1  27 galevvrlLlapgadlnlrdsdgltaldlA 56 
                  g levv lLl +ga++ lrd+ g+ta+d+A
  MMETSP1325-20131115|10788_1 267 GKLEVVGLLLGRGANTELRDKTGRTAYDIA 296
                  67899999*********************9 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0045        12       8      54 .]     108     156 ..     103     156 .. 0.90
   2 !   34.7   0.0   5.5e-12   1.5e-08       3      54 .]     183     234 ..     181     234 .. 0.97
   3 !   42.7   0.1   1.8e-14     5e-11       3      42 ..     216     255 ..     214     263 .. 0.96
   4 ?    3.7   0.0     0.032        87      12      41 ..     267     296 ..     267     306 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0045
    PF13637.1   8 aaisgrlelvklLlek.gidinrt.desGntaLhiAalrgnieilklLl 54 
                   a+ g++el ++ +e  g d+  +  + G t +  Aa +g  e +++L+
  MMETSP1325-20131115|10788_1 108 VAMLGDVELMRSVFEEeGYDVLEKhKATGATTIMHAAGAGSCEGVQYLV 156
                  5789**********766*******9999******************996 PP

  == domain 2    score: 34.7 bits;  conditional E-value: 5.5e-12
    PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                  t+L++a++ g++++v+lLl+ g+++  + + G ++Lh Aa++g++e++ lLl
  MMETSP1325-20131115|10788_1 183 TPLDRAIRCGHIDVVELLLSMGANPSTRRSTGCSPLHAAAEMGRPECAVLLL 234
                  89**************************999*****************9997 PP

  == domain 3    score: 42.7 bits;  conditional E-value: 1.8e-14
    PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGntaLhiAa 42 
                  ++Lh aa +gr e++ lLl+ g+di++t+++G taLh+A+
  MMETSP1325-20131115|10788_1 216 SPLHAAAEMGRPECAVLLLDAGMDIDCTNRDGATALHLAV 255
                  69*************************************8 PP

  == domain 4    score: 3.7 bits;  conditional E-value: 0.032
    PF13637.1  12 grlelvklLlekgidinrtdesGntaLhiA 41 
                  g le+v lLl +g++   +d+ G+ta +iA
  MMETSP1325-20131115|10788_1 267 GKLEVVGLLLGRGANTELRDKTGRTAYDIA 296
                  6799***********7777******98887 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0036       9.9       4      24 ..     138     158 ..     135     162 .. 0.88
   2 !   23.2   0.0   1.5e-08   4.1e-05       4      29 ..     183     208 ..     180     209 .. 0.93
   3 !   19.8   0.0   1.9e-07   0.00053       2      29 ..     214     241 ..     213     242 .. 0.96
   4 ?    3.1   0.0     0.049   1.3e+02       1      11 [.     246     256 ..     246     283 .. 0.61

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0036
    PF13606.1   4 TpLhlAasngrielveaLlen 24 
                  T +++Aa  g++e v++L+e+
  MMETSP1325-20131115|10788_1 138 TTIMHAAGAGSCEGVQYLVER 158
                  668****************96 PP

  == domain 2    score: 23.2 bits;  conditional E-value: 1.5e-08
    PF13606.1   4 TpLhlAasngrielveaLlengadin 29 
                  TpL+ A+++g+i++ve+Ll+ ga+++
  MMETSP1325-20131115|10788_1 183 TPLDRAIRCGHIDVVELLLSMGANPS 208
                  9**********************986 PP

  == domain 3    score: 19.8 bits;  conditional E-value: 1.9e-07
    PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                  G++pLh Aa+ gr+e + +Ll++g+di+
  MMETSP1325-20131115|10788_1 214 GCSPLHAAAEMGRPECAVLLLDAGMDID 241
                  99************************97 PP

  == domain 4    score: 3.1 bits;  conditional E-value: 0.049
    PF13606.1   1 nGnTpLhlAas 11 
                  +G T+LhlA+ 
  MMETSP1325-20131115|10788_1 246 DGATALHLAVT 256
                  688*****975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.43s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 1402.31
//
Query:       MMETSP1325-20131115|10790_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.41s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|10789_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.094   11.9   0.0       0.14   11.4   0.0    1.1  1  PF00902.13 Sec-independent protein translocase protein (TatC)


Domain annotation for each model (and alignments):
>> PF00902.13  Sec-independent protein translocase protein (TatC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   9.9e-06      0.14     164     210 ..     188     234 ..     185     238 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 9.9e-06
   PF00902.13 164 qlPvvllllaklglvsaqtlrknrryaivvifvlaalltPpDvlsql 210
                  qlP +++ l + +lv+ ++lr++   a   ++ +aa +t +D+ + +
  MMETSP1325-20131115|10789_1 188 QLPPLIFQLIRYELVELAKLRRQAHAAQTKSLAIAAAFTTADIATDT 234
                  89*****************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.45s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 1352.61
//
Query:       MMETSP1325-20131115|10792_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.23u 0.41s 00:00:00.64 Elapsed: 00:00:00.46
# Mc/sec: 328.20
//
Query:       MMETSP1325-20131115|10795_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0048   16.2   0.1     0.0083   15.5   0.0    1.4  1  PF01344.20 Kelch motif
  ------ inclusion threshold ------
      0.043   13.9   1.0       0.17   11.9   0.7    2.0  1  PF13964.1  Kelch motif


Domain annotation for each model (and alignments):
>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.2e-06    0.0083       5      47 .]       2      55 ..       1      55 [. 0.95

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.2e-06
                 EEEEEETTEEEEE---BS........TTS-TTEEEEEETT...TTEEEEECCSS CS
   PF01344.20  5 agvvvldgkiYviGGrdg........dtnalnsVerYDpv...tntWeklpsmp 47
                 ++   +dg +++ GG+ g        +++   ++e++  +   t++W++l+ mp
  MMETSP1325-20131115|10795_1  2 YALGIHDGTLFAAGGSYGvgidadssSGSLIEDIEVLTYTgsdTDEWSTLTQMP 55
                 566789**********************************************98 PP

>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.7   2.5e-05      0.17      10      50 .]       7      58 ..       2      58 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.5e-05
    PF13964.1 10 vggkiyifGGytns........gkylndvlvyd...petksWeqlpplpvpr 50
                 ++g+++++GG+++         g+   d++v+     +t+ W++l+++p pr
  MMETSP1325-20131115|10795_1  7 HDGTLFAAGGSYGVgidadsssGSLIEDIEVLTytgSDTDEWSTLTQMPEPR 58
                 68999999999999999999999999999999999999************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|10796_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       946  (0.0691925); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 391.71
//
Query:       MMETSP1325-20131115|10793_1  [L=356]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-57  192.9   0.0    6.9e-57  192.7   0.0    1.1  1  PF04794.7 YdjC-like protein


Domain annotation for each model (and alignments):
>> PF04794.7  YdjC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.7   0.0   5.1e-61   6.9e-57       2     257 ..      41     338 ..      40     342 .. 0.93

  Alignments for each domain:
  == domain 1    score: 192.7 bits;  conditional E-value: 5.1e-61
    PF04794.7   2 klivnADDfGlsegvnrgiiealkaGvvtstslmvngpafeeaaelakenp..slgvGlHltLtegkp.vlsp.tevpslvded..GeflkkskllrallagkldreeveaElraQierfla.lGlkpdHiDsHqhvhvlpqvlevllelareyglpvvrvpleka...lkk.lkaallvrklaaefrarlrragislndkf.....yglaksgedleaallallaklpeg............................tvelmcHPgyvddeelkaksslseqRekElaiLtspevkaa 257
                   liv+ADD+G++e++n+gi++a+++G+vt ts+++ng a ee ++l++++   + ++GlHl+Lteg+p +++p + +psl++ d  G+f++k  l++a  a ++  +ev+ E++aQ++ f+  +G +p+H+D+Hqh hv+p v+++++e++   g++ vr+p+e+    +++     ++vr+ aa++r+ ++++g+   d+f      gla + edl +a++a la l+ +                            t+e+m+HPg+++     +++  + +Re+El++L+ p ++  
  MMETSP1325-20131115|10793_1  41 SLIVTADDMGICEARNEGIVKAMREGIVTQTSIIANGIAGEEGVALLRKYGlvEGRLGLHLNLTEGRPmTADPqRRIPSLLHPDgsGQFRGKTDLAAACAAAEVVAAEVRIEVQAQLAWFERvVGCPPSHVDGHQHYHVTPIVAPIVAEVMGAAGVTRVRIPHEAGgnlARAlCPRCKVVREEAAAVRHIYESHGLLGSDAFvgctlCGLAYTAEDLLEAIDAQLAYLNGEraagrregreqgerasccadsdgggaiaTIEVMVHPGFAG--AGWDEFNCAADREHELEVLCGPVLMRG 338
                  59***********************************************9955667************667889*******98767****************************************************************************999977544477778889**********************9988888888889999999999999887799************************************95..46999****************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.59
# Mc/sec: 1445.94
//
Query:       MMETSP1325-20131115|10798_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                       84  (0.00614394); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.63
# Mc/sec: 289.08
//
Query:       MMETSP1325-20131115|10791_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1091.67
//
Query:       MMETSP1325-20131115|10803_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   14.4   0.0      0.074   12.5   0.0    1.8  1  PF01546.23 Peptidase family M20/M25/M40


Domain annotation for each model (and alignments):
>> PF01546.23  Peptidase family M20/M25/M40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.4e-06     0.074     114     167 ..      17      89 ..       2      93 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.4e-06
                  EEEEE----THHHHTT..TSEEEEEEE--B-....................TTTTSTT--B-CCHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx....................xxxxxxxxxxxxxxxxxxxxxxxx RF
   PF01546.23 114 eplvsgggtdasfiar.vglgfpmiglgpgn....................gtaHspnEkvdlddlekgievlae 167
                     +++gg+d++fia+ v  +  ++ lg+g+                     t+H+  + +++  l++g++++ +
  MMETSP1325-20131115|10803_1  17 VIDPTMGGEDFAFIAQeV--PSVFLALGSGEkswtglmeefgpevgpldttVTVHNSRFVLNEGVLQRGVALHTH 89 
                  5789***********944..4444444444433444444444444666688888888888888888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 509.86
//
Query:       MMETSP1325-20131115|10801_1  [L=380]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      355  (0.0259655); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 1821.23
//
Query:       MMETSP1325-20131115|10804_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0054   16.0   7.6     0.0064   15.7   5.3    1.0  1  PF05308.6 Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   5.3   4.7e-07    0.0064     158     234 ..      20      95 ..       9     106 .. 0.47

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 4.7e-07
    PF05308.6 158 lsdesvslslkssstasvvisdpteepelevppppppPpPlpavslqqs.asaielikerkekks..aeektlvssksks 234
                   +d+++    +++++a    s+++ +++ +  p+ppp +P+++v++++  +s  +  ++++++++  ++ +t +s++s +
  MMETSP1325-20131115|10804_1  20 NDDTNSRKRSSPTTDA----SQVEYAQVPHPMPSPPPTQPVQPVATKRMkTSDADASNQQQQQSEgeQHRDTSTSNTSDE 95 
                  3333333333333333....333333333334777777788777766541343444444444443003444555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1039  (0.0759947); expected 273.4 (0.02)
Passed bias filter:                      529  (0.0386922); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 560.85
//
Query:       MMETSP1325-20131115|10802_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.057   13.0   0.0      0.076   12.6   0.0    1.3  1  PF13537.1 Glutamine amidotransferase domain


Domain annotation for each model (and alignments):
>> PF13537.1  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.5e-06     0.076      24      60 ..      78     114 ..      58     149 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.5e-06
    PF13537.1  24 vvivfnGeiyNykelreeleakgykfrtesDtevlla 60 
                   v+v+nGe+ N   l ++l++   + r + D ++ l 
  MMETSP1325-20131115|10802_1  78 SVVVHNGELANVTVLLHDLQELHDHLRARADEHLALS 114
                  699*******************999****99998543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 665.65
//
Query:       MMETSP1325-20131115|10799_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.36s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 1132.40
//
Query:       MMETSP1325-20131115|10806_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.8e-12   46.2   0.0    5.2e-12   46.1   0.0    1.1  1  PF10152.4 Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   0.0   3.8e-16   5.2e-12     108     147 ..      31      70 ..       9      71 .. 0.92

  Alignments for each domain:
  == domain 1    score: 46.1 bits;  conditional E-value: 3.8e-16
    PF10152.4 108 ltvrkdpryakYfkmlklgVpaeavknKmqaeGldpelld 147
                  + +++dp+yakYfkml++ +p++av +K +a+Gldp+ ld
  MMETSP1325-20131115|10806_1  31 VAIKDDPKYAKYFKMLSMHLPKPAVAMKATADGLDPSFLD 70 
                  7789**********************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 432.28
//
Query:       MMETSP1325-20131115|10805_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 221.88
//
Query:       MMETSP1325-20131115|10807_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 217.85
//
Query:       MMETSP1325-20131115|10809_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|10808_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-13   50.9   0.2    2.5e-13   49.9   0.0    1.6  2  PF08544.8 GHMP kinases C terminal


Domain annotation for each model (and alignments):
>> PF08544.8  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.37   5.1e+03      27      43 ..      26      42 ..      15      45 .. 0.64
   2 !   49.9   0.0   1.8e-17   2.5e-13       3      84 ..      76     157 ..      74     158 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 0.37
    PF08544.8 27 ayvgilspelrelleal 43
                 a++ +++p + el +a 
  MMETSP1325-20131115|10808_1 26 AVLSESFPQVSELRDAT 42
                 46666777777777765 PP

  == domain 2    score: 49.9 bits;  conditional E-value: 1.8e-17
    PF08544.8   3 ealeegdiellgellnenqlseplayvgilspelrellealeelG..algaklsGaGgGptvfalfkdkddaeqvaralaeefe 84 
                   al+egd+e lgel+  +++s +++ +++++pel+ l+e +   G  ++g++++G G+G++ + ++ +k++a+++a  ++e ++
  MMETSP1325-20131115|10808_1  76 VALKEGDFEKLGELMVASHNS-LRDDFEVSTPELDTLVELAVGFGegVMGSRMTGGGFGGCTVTVV-KKEQADALAAHIKEGYK 157
                  699*****************9.7779****************************************.99999999998888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 813.86
//
Query:       MMETSP1325-20131115|10810_1  [L=402]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-30  103.7   0.0    8.3e-30  102.7   0.0    1.6  1  PF04366.7 Family of unknown function (DUF500)


Domain annotation for each model (and alignments):
>> PF04366.7  Family of unknown function (DUF500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.7   0.0     6e-34   8.3e-30       2     125 ..     115     242 ..     114     243 .. 0.96

  Alignments for each domain:
  == domain 1    score: 102.7 bits;  conditional E-value: 6e-34
    PF04366.7   2 tglgaGfqiGveitdvVivlntkealeaftk...gklslGadlsvaagpvGrgaeadtdvse.gsapvysysksrGlfaGvslegtvlterkdanakfYgrkvtvkdIlkgeveappaakkLlevlkk 125
                  +gl++G+qiG+e td+V+ l++++a+e f+    ++l lG++  +a+gp+Gr++ea++ +s+ g+++ +sys+srGlfaG+s+eg++++ r+d n k+Yg+++++++++ g + +p +ak+L++ l++
  MMETSP1325-20131115|10810_1 115 AGLTMGAQIGAEVTDMVVPLHESDAVEHFSVpggSHLMLGGETGLAFGPLGRSGEASVLASTrGMDATMSYSHSRGLFAGMSVEGAYVSVRDDVNMKYYGSEINPAKLFDGTIAPPINAKPLYDKLNE 242
                  7999*************************9765689***************************99***********************************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1888.89
//
Query:       MMETSP1325-20131115|10812_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 549.17
//
Query:       MMETSP1325-20131115|10815_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.1   2.5       0.11   12.0   1.7    1.1  1  PF13019.1 Telomere stability and silencing


Domain annotation for each model (and alignments):
>> PF13019.1  Telomere stability and silencing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.7   8.2e-06      0.11      83     121 ..       8      46 ..       2      48 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 8.2e-06
    PF13019.1  83 lrlcGGKGGFGsqLraaGgrmsskkksnenndssRdLdG 121
                   +  GG GG Gs L   G++ +  ++ n+n +++ d dG
  MMETSP1325-20131115|10815_1   8 SPTSGGGGGRGSPLSSRGSKYGYPQQINNNDGAAADADG 46 
                  5678*******************9999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 263.60
//
Query:       MMETSP1325-20131115|10814_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 758.85
//
Query:       MMETSP1325-20131115|10816_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.023   13.5   1.1      0.025   13.4   0.8    1.1  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
      0.025   14.4   2.9      0.025   14.4   2.0    2.1  2  PF06657.8  Centrosome microtubule-binding domain of Cep57
      0.041   13.3   6.5      0.024   14.1   3.2    1.4  1  PF04156.9  IncA protein
      0.051   11.5   3.3      0.067   11.2   2.3    1.2  1  PF05044.7  Homeobox prospero-like protein (PROX1)
       0.08   11.7   0.5       0.11   11.3   0.3    1.3  1  PF07942.7  N2227-like protein
       0.37   10.0   9.8      0.099   11.9   2.3    2.0  2  PF00038.16 Intermediate filament protein
       0.81    9.5   6.9       0.23   11.3   0.8    2.1  2  PF12203.3  Glutamine rich N terminal domain of histone deacetylase 4
       0.96    9.0   9.2       0.15   11.6   2.7    2.0  2  PF08286.6  Spc24 subunit of Ndc80
        1.1    9.3   4.7       0.25   11.3   1.1    1.5  2  PF08702.5  Fibrinogen alpha/beta chain family
        1.8    8.8   6.2        1.5    9.0   2.1    2.2  2  PF06156.8  Protein of unknown function (DUF972)
        1.9    8.0   5.9       0.54    9.7   0.4    2.3  3  PF02996.12 Prefoldin subunit
        3.4    6.5   6.9       0.59    9.0   2.4    1.4  2  PF01544.13 CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.8   2.2e-05     0.025      36     117 ..      31     120 ..       9     136 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.2e-05
    PF10186.4  36 ketlkkkveealeeaene.............kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrr 117
                  + +lk+ +e + +++++              +++++ q+ l ++   er +++r++i+q +++ + +r+++ el++ l+  r+ l+    ++   
  MMETSP1325-20131115|10816_1  31 QTHLKQYMETHTSDGTEPsdapsatggppppGREEVLQRELVRV-AGERDSNLRNQISQMQRNHSTLRQQYTELSRVLNAEREALQ----EKIDD 120
                  44444444444443333367777778888763333333333333.33444799999999999999999999999999999999988....33333 PP

>> PF06657.8  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.6      0.91     1e+03      24      47 ..      12      25 ..       3      40 .. 0.59
   2 ?   14.4   2.0   2.2e-05     0.025      21      60 ..      81     119 ..      77     129 .. 0.94

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.91
    PF06657.8 24 DElehlkmeyqeladelkkldasl 47
                 +E          l ++  ++d +l
  MMETSP1325-20131115|10816_1 12 EE----------LMEMTSQHDMVL 25
                 34..........444555555444 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.2e-05
    PF06657.8  21 eLeDElehlkmeyqeladelkkldaslskrkrkeLaqele 60 
                  +L++++++++  +++l++++ +l  +l+  +r+ L+++++
  MMETSP1325-20131115|10816_1  81 NLRNQISQMQRNHSTLRQQYTELSRVLNA-EREALQEKID 119
                  899*************************9.9999999986 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   3.2   2.1e-05     0.024      86     147 ..      75     136 ..      56     138 .] 0.82

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 2.1e-05
    PF04156.9  86 sesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeir 147
                  + ++ s l  +++q+++  ++l +++++l+++l  ++e+l+++ + ++ le ++ ++ ++i+
  MMETSP1325-20131115|10816_1  75 AGERDSNLRNQISQMQRNHSTLRQQYTELSRVLNAEREALQEKIDDNDYLEMELRNAKRKIA 136
                  56788899999999999999999999999999999999999999999999988888888776 PP

>> PF05044.7  Homeobox prospero-like protein (PROX1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   2.3   5.8e-05     0.067     313     360 ..      78     126 ..      63     135 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.8e-05
    PF05044.7 313 ekdalKsqlrsmqeqLaelqqkyvqlcsrme..qesetqevvddeseeDi 360
                      l++q+ +mq+    l q+y +l sr+   +++  qe +dd++  ++
  MMETSP1325-20131115|10816_1  78 RDSNLRNQISQMQRNHSTLRQQYTEL-SRVLnaEREALQEKIDDNDYLEM 126
                  3456**********************.88653455667999999876554 PP

>> PF07942.7  N2227-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   9.7e-05      0.11       5      43 ..      82     120 ..      78     137 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 9.7e-05
    PF07942.7   5 vlasrldmskvrstlrqivRdwsaegkeERealykpiie 43 
                   ++++++m++ +stlrq + + s   ++EReal+++i +
  MMETSP1325-20131115|10816_1  82 LRNQISQMQRNHSTLRQQYTELSRVLNAEREALQEKIDD 120
                  567899****************************99865 PP

>> PF00038.16  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.3     0.073        83     135     158 ..       5      27 ..       2      44 .. 0.70
   2 ?   11.9   2.3   8.7e-05     0.099     227     278 ..      81     135 ..      66     138 .] 0.79

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.073
   PF00038.16 135 flkklheeEvkelqkqikeqvnve 158
                    k  h+eE+ e+++q+ ++v  +
  MMETSP1325-20131115|10816_1   5 QSKFSHDEELMEMTSQH-DMVLTS 27 
                  56778999999999999.444443 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 8.7e-05
   PF00038.16 227 sleieleslkkqkeslerqlaeleerleeelkklqekise...leeelqelkeem 278
                  +l+ +++++++++++l +q +el + l++e++ lqeki++   le el+++k ++
  MMETSP1325-20131115|10816_1  81 NLRNQISQMQRNHSTLRQQYTELSRVLNAEREALQEKIDDndyLEMELRNAKRKI 135
                  5778899999999999999999999999999999999986444678888888766 PP

>> PF12203.3  Glutamine rich N terminal domain of histone deacetylase 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.3      0.24   2.7e+02      39      57 ..      16      39 ..       3      45 .. 0.54
   2 ?   11.3   0.8    0.0002      0.23       7      63 ..      63     118 ..      59     135 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.24
    PF12203.3 39 kltrqheaql.....qehlkqqqe 57
                 ++t qh++ l     q hlkq  e
  MMETSP1325-20131115|10816_1 16 EMTSQHDMVLtslleQTHLKQYME 39
                 345566655422223456665544 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.0002
    PF12203.3   7 rerqlqqellllkkqqqiqkqlliaefqkqhekltrqheaqlqehlkqqqellalkk 63 
                  re+ lq+el+ +  +++   +  i+++q++h +l rq  + l + l  ++e l  k 
  MMETSP1325-20131115|10816_1  63 REEVLQRELVRVAGERDSNLRNQISQMQRNHSTL-RQQYTELSRVLNAEREALQEKI 118
                  8999******99887777777779********99.5666788888888777665553 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.2      0.37   4.3e+02       5      45 ..       4      44 ..       1      55 [. 0.50
   2 ?   11.6   2.7   0.00013      0.15       5      59 ..      68     121 ..      64     135 .. 0.74

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.37
    PF08286.6  5 dnekvrlakelndleselenlqseleelkeeleeleeqene 45
                 +++k++  +el ++ s+  ++ ++l e ++  + +e+ +++
  MMETSP1325-20131115|10816_1  4 EQSKFSHDEELMEMTSQHDMVLTSLLEQTHLKQYMETHTSD 44
                 55555555555555555554444444444444444444444 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.00013
    PF08286.6   5 dnekvrlake.lndleselenlqseleelkeeleeleeqenegkeedeeeaeeeds 59 
                   +e+vr+a e  ++l ++++++q++ + l+++++el++ +n + e+ +e  + +d+
  MMETSP1325-20131115|10816_1  68 QRELVRVAGErDSNLRNQISQMQRNHSTLRQQYTELSRVLNAEREALQE--KIDDN 121
                  56777877552689***************************93333332..33333 PP

>> PF08702.5  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       3.5     4e+03      79      79 ..      24      24 ..       3      44 .. 0.48
   2 ?   11.3   1.1   0.00022      0.25      39      86 ..      80     127 ..      65     137 .. 0.75

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 3.5
                 H CS
    PF08702.5 79 i 79
                 +
  MMETSP1325-20131115|10816_1 24 V 24
                 1 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00022
                  CCHCCCCHHHHCHCCHHHHHHHHHHHHHHCCCHCHCCHHHHHHHHHHH CS
    PF08702.5  39 eklenlLeqlanktkeieelvksikeslkekqkqakdndniesavsks 86 
                  ++l+n++ q+++++++ ++++++++  l+ +++  +++    + ++ +
  MMETSP1325-20131115|10816_1  80 SNLRNQISQMQRNHSTLRQQYTELSRVLNAEREALQEKIDDNDYLEME 127
                  789*************************99988766553333333333 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.83   9.5e+02      43      53 ..      29      39 ..       4      56 .. 0.51
   2 ?    9.0   2.1    0.0013       1.5       6      52 ..      82     135 ..      77     138 .] 0.55

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.83
    PF06156.8 43 leneklrerle 53
                 le ++l++ +e
  MMETSP1325-20131115|10816_1 29 LEQTHLKQYME 39
                 23333333333 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0013
    PF06156.8   6 lfdklseleeqleelleeleel.......kkelkelleenaelkleneklrerl 52 
                  l +++s+++++ ++l ++++el       ++ l+e +++n  l++e ++ ++++
  MMETSP1325-20131115|10816_1  82 LRNQISQMQRNHSTLRQQYTELsrvlnaeREALQEKIDDNDYLEMELRNAKRKI 135
                  455555555555555544444422222225566777777777777777777665 PP

>> PF02996.12  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       4.6   5.2e+03       7      15 ..      16      24 ..       5      40 .. 0.54
   2 ?    9.7   0.4   0.00048      0.54      85     115 ..      78     108 ..      73     112 .. 0.89
   3 ?    2.1   0.1      0.11   1.3e+02       8      33 ..     107     132 ..     105     136 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 4.6
                 HHHHHHHHH CS
   PF02996.12  7 slqaeleql 15
                 +++++++ +
  MMETSP1325-20131115|10816_1 16 EMTSQHDMV 24
                 333333333 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00048
                  HHHHHHHHHHHH---HHHHHHH---HHHHHH CS
   PF02996.12  85 kleelekqlekleeeleklkdqittleanla 115
                  + ++l++q+ +++ ++ +l++q+t+l + l+
  MMETSP1325-20131115|10816_1  78 RDSNLRNQISQMQRNHSTLRQQYTELSRVLN 108
                  77899********************998776 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.11
                  HHHHHHHHHHHHHHHHHHHHHHHHHT CS
   PF02996.12   8 lqaeleqlkeaieelektletlktlk 33 
                  l+ae+e+l+e+i++++ ++  l++ k
  MMETSP1325-20131115|10816_1 107 LNAEREALQEKIDDNDYLEMELRNAK 132
                  67889999999999887777776655 PP

>> PF01544.13  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.1   2.4e+03     165     183 ..      16      34 ..      10      44 .. 0.51
   2 ?    9.0   2.4   0.00052      0.59     142     195 ..      75     125 ..      64     135 .. 0.70

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.1
   PF01544.13 165 rallplrdvlkrllrrkdk 183
                   +++++  vl++ll++ + 
  MMETSP1325-20131115|10816_1  16 EMTSQHDMVLTSLLEQTHL 34 
                  4444444555555553333 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00052
   PF01544.13 142 edetkkellreilqlrrelvrlrrallplrdvlkrllrrkdkkllteedkeylr 195
                    e++ +l ++i+q++r+ ++lr+++ +l +vl +  r +++++++++d  yl+
  MMETSP1325-20131115|10816_1  75 AGERDSNLRNQISQMQRNHSTLRQQYTELSRVL-NAEREALQEKIDDND--YLE 125
                  677788888889999999999999999999999.666667777777776..333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1055  (0.077165); expected 273.4 (0.02)
Passed bias filter:                      662  (0.0484201); expected 273.4 (0.02)
Passed Vit filter:                        99  (0.00724108); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.53u 0.43s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 648.43
//
Query:       MMETSP1325-20131115|10817_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-19   67.8   5.2    1.8e-18   66.5   3.6    1.6  1  PF00615.14 Regulator of G protein signaling domain


Domain annotation for each model (and alignments):
>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   3.6   1.3e-22   1.8e-18       1     118 []      45     198 ..      45     198 .. 0.96

  Alignments for each domain:
  == domain 1    score: 66.5 bits;  conditional E-value: 1.3e-22
                  -HHHHHTSS---HHHHHHHHTTTTHHHHHHHHHHHHHCTS...--HHHHHHHHHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS...................................--TTTTHHHHHHHHHHHTTHHHHHHHCSHHHHHH CS
   PF00615.14   1 sleslledqpgrslFreFlesefseenleFwlaveefkka...keqeelskkakeIynkylapsspkelnidkklreeleknleka.................................qpsrklfeeaqeevfrllekdsypkFlkselylrl 118
                  +le++l++   rs+F +F+e+e++ enl+F++ ++++ ++   +++ee+ +++ eIy++yl  +s++++ni+ k+ + + + l                                     p+ ++fee  eevf+l+ kd + +F kse +++l
  MMETSP1325-20131115|10817_1  45 RLENVLSHDIARSFFNKFVENEYAAENLHFYDRIDDYMSKwadRTDEETLADCMEIYEEYLRVGSNQQVNIPAKMLKVVTDLLFPPekaeekdaeeveaeeeegedafdetamgatqprFPDLSIFEESHEEVFTLMMKDNFARFKKSEDFKEL 198
                  6899************************************************************************9999988666778999************************9998999**************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       618  (0.0452019); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1139.40
//
Query:       MMETSP1325-20131115|10818_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 811.83
//
Query:       MMETSP1325-20131115|10819_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 569.80
//
Query:       MMETSP1325-20131115|10821_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.33s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 577.30
//
Query:       MMETSP1325-20131115|10822_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.65
# Mc/sec: 232.26
//
Query:       MMETSP1325-20131115|10825_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.019   14.7   0.2      0.027   14.2   0.1    1.3  1  PF00112.18 Papain family cysteine protease


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1     2e-06     0.027       6      26 ..      47      65 ..      42      66 .] 0.79

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2e-06
                 -CCCTT.GGG---B------H CS
   PF00112.18  6 DwrekkgavtpvkdqgqCGsC 26
                 Dw       tpvkdqg CGsC
  MMETSP1325-20131115|10825_1 47 DWTG--ILTTPVKDQGYCGSC 65
                 4544..3479*********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.66
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10826_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.46
# Mc/sec: 354.24
//
Query:       MMETSP1325-20131115|10827_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-19   70.1   0.3    1.2e-19   70.0   0.2    1.0  1  PF05761.9 5' nucleotidase family
  ------ inclusion threshold ------
       0.01   13.9   0.1      0.011   13.7   0.0    1.0  1  PF04441.8 Poxvirus early transcription factor (VETF), large subunit
       0.02   14.4   0.0      0.025   14.1   0.0    1.2  1  PF13242.1 HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> PF05761.9  5' nucleotidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.2   2.7e-23   1.2e-19     286     364 ..       3      81 ..       1      93 [. 0.89

  Alignments for each domain:
  == domain 1    score: 70.0 bits;  conditional E-value: 2.7e-23
    PF05761.9 286 elekllgvkGsevLYvGDHiygDilkskkksgWrtalvvpELekElevlesekekkeelseleelleelekelskkree 364
                  ++ekl +++ ++vLYvGDH+++D++ +k + +Wrt+lvv+ELe E+  +++++  +e+++el++ +++l++ ++++r +
  MMETSP1325-20131115|10827_1   3 MVEKLFNTSSDSVLYVGDHVFADVSVAKATLRWRTCLVVQELEAEVLGMAKDQRVRESIRELQVRKQQLSDVFNHMRVD 81 
                  68999******************************************************************99966633 PP

>> PF04441.8  Poxvirus early transcription factor (VETF), large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.5e-06     0.011     537     616 ..      10      92 ..       3      94 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.5e-06
    PF04441.8 537 neenailiaddlvYfpkdileinn..kvfiliqeivhevvlvkkeed.kDkievsevdekklkdlfpvktksvkiksenGlkl 616
                   ++ ++l ++d v+ + ++ +     ++ +++qe   ev  + k+++ +++i+  +v++++l d+f+++   ++ ++ + +++
  MMETSP1325-20131115|10827_1  10 TSSDSVLYVGDHVFADVSVAKATLrwRTCLVVQELEAEVLGMAKDQRvRESIRELQVRKQQLSDVFNHMRVDMRRHEAESITI 92 
                  567899*************9988767999*********9988887653799******************99999999998887 PP

>> PF13242.1  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.4e-06     0.025      18      52 ..       9      44 ..       1      64 [. 0.75

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.4e-06
                 -GGTTTEEEE---.HHHHHHHHH.---EE------- CS
    PF13242.1 18 gappsevvmiGDslatDieaAna.aGirsilVltGv 52
                 +  +++v+++GD + +D+  A+a + +r++lV   +
  MMETSP1325-20131115|10827_1  9 NTSSDSVLYVGDHVFADVSVAKAtLRWRTCLVVQEL 44
                 444678****************8468*****97755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       669  (0.0489321); expected 273.4 (0.02)
Passed bias filter:                      517  (0.0378145); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|10828_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      357  (0.0261118); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|10829_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.096   12.2   0.0       0.52    9.8   0.0    2.0  2  PF03793.14 PASTA domain


Domain annotation for each model (and alignments):
>> PF03793.14  PASTA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0     0.053   7.2e+02      16      30 ..       5      22 ..       2      33 .. 0.63
   2 ?    9.8   0.0   3.8e-05      0.52       1      17 [.      63      79 ..      63      86 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.053
                 HHHHCTT-...EEEEEEE CS
   PF03793.14 16 atLkalGl...kiktvee 30
                 + L++ G+   ++++v++
  MMETSP1325-20131115|10829_1  5 SRLQKRGVtikPYSYVRY 22
                 578899996665555555 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 3.8e-05
                 EE--TTCTT-HHHHHHH CS
   PF03793.14  1 vtvPdvtGmsvdeAkat 17
                 v vPd+tG s+d++ka+
  MMETSP1325-20131115|10829_1 63 VSVPDYTGCSYDSVKAL 79
                 67************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|10830_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|10831_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.29   10.8   1.4       0.52   10.0   0.7    1.8  1  PF12425.3 Protein of unknown function (DUF3673)


Domain annotation for each model (and alignments):
>> PF12425.3  Protein of unknown function (DUF3673)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.7   3.8e-05      0.52      25      47 ..       9      31 ..       3      53 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 3.8e-05
    PF12425.3 25 akevaHaqpapvyankkmvYaak 47
                  +++a a+++ ++an+k  ++++
  MMETSP1325-20131115|10831_1  9 DRAIALAYQRSKHANEKPGGRQQ 31
                 589**************998554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 262.68
//
Query:       MMETSP1325-20131115|10832_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00057   19.4   0.0     0.0012   18.4   0.0    1.5  1  PF00226.26 DnaJ domain
  ------ inclusion threshold ------
      0.073   13.2   1.1      0.073   13.2   0.8    2.2  2  PF10931.3  Protein of unknown function (DUF2735)


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.7e-07    0.0012      46      63 ..       2      19 ..       1      20 [. 0.94

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.7e-07
                 HHHHHHHHHTSHHHHHHH CS
   PF00226.26 46 eineAyevLsdpekraey 63
                 ei++Ay++Lsdp+kr+ey
  MMETSP1325-20131115|10832_1  2 EISNAYDILSDPTKRREY 19
                 89***************9 PP

>> PF10931.3  Protein of unknown function (DUF2735)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.26   1.8e+03      11      21 ..      26      36 ..      22      47 .. 0.60
   2 ?   13.2   0.8   1.1e-05     0.073      15      44 ..      48      77 ..      42      77 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.26
    PF10931.3 11 graganrrraa 21
                 gr+ a r++++
  MMETSP1325-20131115|10832_1 26 GRREARRQQNR 36
                 55555555533 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 1.1e-05
    PF10931.3 15 anrrraaleaeraapgkaeavtsgsWYHde 44
                 a+r+++++e+e++a  +a+ + +g  YH+e
  MMETSP1325-20131115|10832_1 48 AARQQRRWEEEQMAGHRADEAFGGGGYHEE 77
                 4555679**********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 789.39
//
Query:       MMETSP1325-20131115|10835_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   10.4   8.4        1.1    8.0   5.8    1.8  1  PF06814.8 Lung seven transmembrane receptor
       0.28   10.8   4.0        1.6    8.4   0.2    2.4  2  PF11137.3 Protein of unknown function (DUF2909)


Domain annotation for each model (and alignments):
>> PF06814.8  Lung seven transmembrane receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.8   0.00016       1.1      60     157 ..       1     114 [.       1     128 [. 0.77

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00016
    PF06814.8  60 llgilWlfilakykkdvlklqkliaavialgmvelafvyleyatinskGss................ievlavlasilsalkktlsrllllivslGygivkpkLgdllkkvlll 157
                  ll+++W+++++ky+   ++lq  + +v++ ++  +++   +y  ++    +                 + +av++++   + ++lsr+ll +++ G  + +p L+++ ++ + +
  MMETSP1325-20131115|10835_1   1 LLAVVWSYRMRKYWGYTITLQLTLFLVMLANLTYTVLAFGYYLHLDLDTKAtaqkifggiyaglyevGDPYAVVIATYRFILMSLSRALLTMLCDGLFVLRPLLKQRCRTKAFV 114
                  6899******************99999998888888888888777655444446677777677655555688999999999999999999999999999999998876554433 PP

>> PF11137.3  Protein of unknown function (DUF2909)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.2    0.0069        47      31      55 ..       8      32 ..       6      39 .. 0.76
   2 ?    8.4   0.2   0.00024       1.6       4      26 ..      73      95 ..      71     118 .. 0.85

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0069
    PF11137.3 31 krmvraLalRVglSvalflllllal 55
                  rm ++ ++ ++l ++lfl++l  l
  MMETSP1325-20131115|10835_1  8 YRMRKYWGYTITLQLTLFLVMLANL 32
                 5788888888888888888887654 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00024
    PF11137.3  4 livllLlaivaSLgsALfflvkd 26
                 ++++   +i++SL +AL  ++ d
  MMETSP1325-20131115|10835_1 73 VVIATYRFILMSLSRALLTMLCD 95
                 67777789************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 724.12
//
Query:       MMETSP1325-20131115|10836_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|10838_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 597.06
//
Query:       MMETSP1325-20131115|10837_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 627.41
//
Query:       MMETSP1325-20131115|10839_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 363.59
//
Query:       MMETSP1325-20131115|10840_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|10841_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 682.44
//
Query:       MMETSP1325-20131115|10843_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.6    7.2   5.8        1.6    7.2   4.0    1.0  1  PF04625.8 DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   4.0   0.00011       1.6     107     143 ..       7      43 ..       2      60 .. 0.67

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00011
    PF04625.8 107 apvpapapaaaaapaaasapaadspa.asvpdaaqpai 143
                  + vp p+p+aa++ a  +ap+a+  a ++vp    p+i
  MMETSP1325-20131115|10843_1   7 TAVPHPSPTAAPVKAVHPAPTAHVNAvTPVPT-QMPSI 43 
                  46889999999998888998887665134553.34544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 284.85
//
Query:       MMETSP1325-20131115|10842_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 434.06
//
Query:       MMETSP1325-20131115|10844_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-28   97.2   5.6    8.7e-10   37.8   2.5    4.4  5  PF12799.2  Leucine Rich repeats (2 copies)
    1.2e-15   56.8   8.3    3.6e-08   32.9   1.5    4.0  4  PF13855.1  Leucine rich repeat
    1.1e-12   45.9   7.8       0.17   11.9   0.3    6.4  5  PF00560.28 Leucine Rich Repeat
    2.4e-09   36.1   8.8     0.0019   17.9   0.1    6.0  7  PF13516.1  Leucine Rich repeat
    4.6e-08   31.8   8.4       0.66   10.3   0.1    6.2  6  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   3.6e-05     0.098      23      40 ..      11      28 ..       9      31 .. 0.86
   2 !   25.7   0.3   2.1e-09   5.7e-06       3      42 ..      36      75 ..      34      78 .. 0.94
   3 !   29.0   0.4   1.8e-10     5e-07      10      42 ..      66      97 ..      64      97 .. 0.93
   4 !   37.8   2.5   3.2e-13   8.7e-10       1      42 [.      79     119 ..      79     121 .. 0.94
   5 !   17.7   0.0   6.4e-07    0.0017       3      36 ..     125     160 ..     123     171 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.6e-05
    PF12799.2 23 LpnLktLnLsnNpisdls 40
                 L++L+ ++L +N+i +l 
  MMETSP1325-20131115|10844_1 11 LTKLRKIDLGGNRIRSLA 28
                 999999999999999885 PP

  == domain 2    score: 25.7 bits;  conditional E-value: 2.1e-09
    PF12799.2  3 LevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaL 42
                 L++L+L +N+I+  +  l +L+nL  L+ + N+i+++s L
  MMETSP1325-20131115|10844_1 36 LQELWLGKNKITAMDDNLTGLTNLVRLDSQCNRITEISHL 75
                 9**************99*******************9987 PP

  == domain 3    score: 29.0 bits;  conditional E-value: 1.8e-10
    PF12799.2 10 nNnIkdlppelanLpnLktLnLsnNpisdlsaL 42
                  N+I+++++ l  L+nL++L+Ls+N is+++ L
  MMETSP1325-20131115|10844_1 66 CNRITEISH-LDTLTNLEELYLSRNGISKVNGL 97
                 59*******.******************98765 PP

  == domain 4    score: 37.8 bits;  conditional E-value: 3.2e-13
    PF12799.2   1 tnLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaL 42 
                  tnLe+L+Ls+N I+++++ l+ L nL t++LsnN++++ + L
  MMETSP1325-20131115|10844_1  79 TNLEELYLSRNGISKVNG-LGALANLNTIDLSNNRLTSTEGL 119
                  8*****************.******************96666 PP

  == domain 5    score: 17.7 bits;  conditional E-value: 6.4e-07
    PF12799.2   3 LevLdLsnNnIkdlppe..lanLpnLktLnLsnNpi 36 
                  Le+++Ls N++ + +++  l +L+ L   +L++Np+
  MMETSP1325-20131115|10844_1 125 LEEVWLSANQVASFDAVtpLQGLTELSCVYLEHNPV 160
                  9********9988554334***************97 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00096       2.6      25      40 ..      12      27 ..       9      33 .. 0.61
   2 !   32.9   1.5   1.3e-11   3.6e-08       3      61 .]      36      91 ..      34      91 .. 0.93
   3 !   19.7   1.6   1.7e-07   0.00048       1      39 [.      79     115 ..      79     121 .. 0.89
   4 !   16.5   0.3   1.7e-06    0.0048       2      60 ..     102     159 ..     101     160 .. 0.94

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00096
    PF13855.1 25 snLkvLdLsgnnlksi 40
                 ++L+++dL+gn++ s+
  MMETSP1325-20131115|10844_1 12 TKLRKIDLGGNRIRSL 27
                 5555555555555544 PP

  == domain 2    score: 32.9 bits;  conditional E-value: 1.3e-11
    PF13855.1  3 LkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispeafkgLpsLreLnLsgNrl 61
                 L+eL+L +N+++ ++d  + gl+nL  Ld ++n++++is   ++ L++L+eL+Ls N +
  MMETSP1325-20131115|10844_1 36 LQELWLGKNKITAMDD-NLTGLTNLVRLDSQCNRITEISH--LDTLTNLEELYLSRNGI 91
                 9*************96.7788*****************95..9*************976 PP

  == domain 3    score: 19.7 bits;  conditional E-value: 1.7e-07
    PF13855.1   1 pnLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlks 39 
                  +nL+eL+Ls+N ++++    ++ l nL ++dLs+n+l+s
  MMETSP1325-20131115|10844_1  79 TNLEELYLSRNGISKVNG--LGALANLNTIDLSNNRLTS 115
                  699*************85..88899999*****999986 PP

  == domain 4    score: 16.5 bits;  conditional E-value: 1.7e-06
    PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksispea.fkgLpsLreLnLsgNr 60 
                  nL ++dLsnNrl++ +   ++  + L++  Ls n   s+++ + ++gL+ L+ ++L++N+
  MMETSP1325-20131115|10844_1 102 NLNTIDLSNNRLTSTEG--LEVAPLLEEVWLSANQVASFDAVTpLQGLTELSCVYLEHNP 159
                  9*************985..9999******************888***************6 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0007       1.9       1      15 [.      13      27 ..      13      33 .. 0.88
   2 !    6.2   0.0    0.0043        12       2      21 ..      36      55 ..      35      56 .. 0.86
   3 !    5.5   0.2    0.0078        21       1      20 [.      58      76 ..      58      78 .. 0.87
   4 !   11.7   0.1     7e-05      0.19       1      16 [.      80      95 ..      80     100 .. 0.83
   5 !   11.9   0.3   6.2e-05      0.17       1      15 [.     102     121 ..     102     162 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0007
                 TESEEEETSSBCBCH CS
   PF00560.28  1 nLeeLdLsgNnltsl 15
                 +L+++dL gN++ sl
  MMETSP1325-20131115|10844_1 13 KLRKIDLGGNRIRSL 27
                 69**********986 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0043
                 ESEEEETSSBCBCHHHHHHH CS
   PF00560.28  2 LeeLdLsgNnltslppslsn 21
                 L+eL L  N++t   ++l +
  MMETSP1325-20131115|10844_1 36 LQELWLGKNKITAMDDNLTG 55
                 9***********98887766 PP

  == domain 3    score: 5.5 bits;  conditional E-value: 0.0078
                 TESEEEETSSBCBCHHHHHH CS
   PF00560.28  1 nLeeLdLsgNnltslppsls 20
                 nL +Ld ++N++t++++ l 
  MMETSP1325-20131115|10844_1 58 NLVRLDSQCNRITEISH-LD 76
                 8999**********998.65 PP

  == domain 4    score: 11.7 bits;  conditional E-value: 7e-05
                 TESEEEETSSBCBCHH CS
   PF00560.28  1 nLeeLdLsgNnltslp 16
                 nLeeL+Ls+N ++++ 
  MMETSP1325-20131115|10844_1 80 NLEELYLSRNGISKVN 95
                 8***********9765 PP

  == domain 5    score: 11.9 bits;  conditional E-value: 6.2e-05
                  TESEEEETSSBCBC.....H CS
   PF00560.28   1 nLeeLdLsgNnlts.....l 15 
                  nL ++dLs+N+lts     +
  MMETSP1325-20131115|10844_1 102 NLNTIDLSNNRLTStegleV 121
                  899**********7566551 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0067        18       1      16 [.      11      26 ..      11      32 .. 0.83
   2 ?    3.9   0.0     0.023        63       4      15 ..      36      47 ..      33      54 .. 0.88
   3 ?   -0.8   0.0      0.77   2.1e+03       2      15 ..      57      70 ..      53      73 .. 0.59
   4 !   17.9   0.1   6.8e-07    0.0019       1      24 []      78     102 ..      78     102 .. 0.94
   5 !    8.8   0.6    0.0006       1.6       3      19 ..     102     119 ..     100     124 .. 0.83
   6 ?   -1.0   0.0      0.94   2.6e+03       4      14 ..     125     135 ..     122     141 .. 0.79
   7 ?   -1.3   0.0       1.1   3.1e+03       4      13 ..     147     159 ..     144     163 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0067
    PF13516.1  1 lknLtsLdLsnNqigd 16
                 l++L+ +dL++N i +
  MMETSP1325-20131115|10844_1 11 LTKLRKIDLGGNRIRS 26
                 6899*********965 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.023
    PF13516.1  4 LtsLdLsnNqig 15
                 L++L L++N+i+
  MMETSP1325-20131115|10844_1 36 LQELWLGKNKIT 47
                 99*********7 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 0.77
    PF13516.1  2 knLtsLdLsnNqig 15
                 +nL  Ld + N i+
  MMETSP1325-20131115|10844_1 57 TNLVRLDSQCNRIT 70
                 55555554556676 PP

  == domain 4    score: 17.9 bits;  conditional E-value: 6.8e-07
    PF13516.1   1 lknLtsLdLsnNqigd.eGlsaLan 24 
                  l+nL++L Ls+N+i++ +Gl aLan
  MMETSP1325-20131115|10844_1  78 LTNLEELYLSRNGISKvNGLGALAN 102
                  79*************9999999997 PP

  == domain 5    score: 8.8 bits;  conditional E-value: 0.0006
    PF13516.1   3 nLtsLdLsnNqigd.eGl 19 
                  nL ++dLsnN +++ eGl
  MMETSP1325-20131115|10844_1 102 NLNTIDLSNNRLTStEGL 119
                  999********9874665 PP

  == domain 6    score: -1.0 bits;  conditional E-value: 0.94
    PF13516.1   4 LtsLdLsnNqi 14 
                  L++  Ls Nq+
  MMETSP1325-20131115|10844_1 125 LEEVWLSANQV 135
                  788889*9997 PP

  == domain 7    score: -1.3 bits;  conditional E-value: 1.1
    PF13516.1   4 LtsL...dLsnNq 13 
                  Lt+L    L +N+
  MMETSP1325-20131115|10844_1 147 LTELscvYLEHNP 159
                  6666433588887 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0026         7       1      16 [.      12      27 ..      12      28 .. 0.91
   2 ?    3.2   0.0     0.053   1.5e+02       3      14 ..      36      47 ..      34      56 .. 0.88
   3 ?    2.9   0.1     0.069   1.9e+02       1      16 [.      57      72 ..      52      73 .. 0.61
   4 !   10.3   0.1   0.00024      0.66       1      14 [.      79      92 ..      79      97 .. 0.88
   5 !    7.5   0.2     0.002       5.5       2      15 ..     102     115 ..      98     119 .. 0.84
   6 ?   -0.8   0.0       1.1   3.1e+03       3       8 ..     147     152 ..     145     164 .. 0.64

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0026
    PF13504.1  1 pnLkeLdLsgnrLtsL 16
                 ++L++ dL gnr+ sL
  MMETSP1325-20131115|10844_1 12 TKLRKIDLGGNRIRSL 27
                 68***********998 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.053
    PF13504.1  3 LkeLdLsgnrLt 14
                 L+eL L  n++t
  MMETSP1325-20131115|10844_1 36 LQELWLGKNKIT 47
                 9********998 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.069
    PF13504.1  1 pnLkeLdLsgnrLtsL 16
                 +nL +Ld  +nr+t++
  MMETSP1325-20131115|10844_1 57 TNLVRLDSQCNRITEI 72
                 3444444455779987 PP

  == domain 4    score: 10.3 bits;  conditional E-value: 0.00024
    PF13504.1  1 pnLkeLdLsgnrLt 14
                 +nL+eL+Ls+n++ 
  MMETSP1325-20131115|10844_1 79 TNLEELYLSRNGIS 92
                 79*********986 PP

  == domain 5    score: 7.5 bits;  conditional E-value: 0.002
    PF13504.1   2 nLkeLdLsgnrLts 15 
                  nL + dLs+nrLts
  MMETSP1325-20131115|10844_1 102 NLNTIDLSNNRLTS 115
                  677779******96 PP

  == domain 6    score: -0.8 bits;  conditional E-value: 1.1
    PF13504.1   3 LkeLdL 8  
                  L+eL+ 
  MMETSP1325-20131115|10844_1 147 LTELSC 152
                  888863 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 883.36
//
Query:       MMETSP1325-20131115|10846_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-06   26.9   0.0    2.7e-06   26.8   0.0    1.0  1  PF00664.18 ABC transporter transmembrane region


Domain annotation for each model (and alignments):
>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0     2e-10   2.7e-06     166     249 ..       3      85 ..       1      91 [] 0.87

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 2e-10
   PF00664.18 166 kslqkkeqkayakagavaeEalsgirtVkafggeekeleryekaleeakkagikkaitagllfgftqlisylsyalalwfgtfl 249
                  +slq   + + + a+++  E+l+g  t++af++e  +++     le+  ++++  ++++++l  ++++++ + ++l + + ++l
  MMETSP1325-20131115|10846_1   3 RSLQALAEPTEDRASQHRVESLEGASTIRAFRAEGMFIDGNMAVLERNLRSYYLNVASNRWLALRLEALGAI-IVLLASLLAVL 85 
                  5677777778899***********************************************************.55555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 445.04
//
Query:       MMETSP1325-20131115|10847_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.085   12.1   1.2       0.11   11.6   0.9    1.2  1  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.9   8.3e-06      0.11     150     205 ..      75     130 ..      67     141 .] 0.49

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 8.3e-06
    PF05308.6 150 lstadllslsdesvslslkss.stasvvisdpteepelevppppppPpPlpavslqq 205
                  +  ++++ ++ +  +++ +++ ++ s ++ + t++    +  ppppPpP   ++l +
  MMETSP1325-20131115|10847_1  75 SAGTGIVLADANAKDMQAPQTgDSDSLLLPAATAAAAAAAAAPPPPPPP-VVSKLPP 130
                  5555554444444455555554566666666666664544443433333.3334433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 675.77
//
Query:       MMETSP1325-20131115|10848_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 875.19
//
Query:       MMETSP1325-20131115|10845_1  [L=367]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.49
# Mc/sec: 1794.82
//
Query:       MMETSP1325-20131115|10849_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|10854_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-09   36.9   0.1    3.8e-09   36.6   0.1    1.2  1  PF12796.2  Ankyrin repeats (3 copies)
    1.8e-08   34.5   0.4    0.00083   19.7   0.1    1.8  2  PF13637.1  Ankyrin repeats (many copies)
    1.9e-08   34.1   0.0    3.8e-06   26.8   0.0    2.2  2  PF13857.1  Ankyrin repeats (many copies)
    4.2e-08   32.4   0.5    9.5e-08   31.3   0.0    1.7  2  PF00023.25 Ankyrin repeat
      7e-06   25.6   0.1    2.6e-05   23.9   0.0    1.9  2  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.089   12.1   0.0       0.13   11.6   0.0    1.2  1  PF03173.8  Putative carbohydrate binding domain


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.1   1.7e-12   3.8e-09       4      89 .]      62     119 ..      48     123 .] 0.56

  Alignments for each domain:
  == domain 1    score: 36.6 bits;  conditional E-value: 1.7e-12
    PF12796.2   4 AaengnlelvklLlekgadvdlgetpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89 
                  A++ng+++ vk  l + a++                             n kd++ ++ Lh+A+ ++h+ +v+lLle+gad+ +++
  MMETSP1325-20131115|10854_1  62 AIKNGDVDGVKSVLRAAAECA----------------------------NYKDHQDQSMLHIAAIFNHTQIVDLLLEAGADPTVKN 119
                  555555555555555554444............................4444555555555555555555555555555554443 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   3.6e-07   0.00083       5      54 .]      59     109 ..      58     109 .. 0.88
   2 !   19.3   0.0   4.8e-07    0.0011       5      33 ..      93     121 ..      90     123 .] 0.91

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 3.6e-07
    PF13637.1   5 LhyaaisgrlelvklLlekgid.inrtdesGntaLhiAalrgnieilklLl 54 
                  L+ a++ g+++ vk+ l   ++  n++d +  + LhiAa +++ +i+ lLl
  MMETSP1325-20131115|10854_1  59 LRDAIKNGDVDGVKSVLRAAAEcANYKDHQDQSMLHIAAIFNHTQIVDLLL 109
                  677999999999999994455559999**********************97 PP

  == domain 2    score: 19.3 bits;  conditional E-value: 4.8e-07
    PF13637.1   5 LhyaaisgrlelvklLlekgidinrtdes 33 
                  Lh aai++++++v lLle g+d+  ++++
  MMETSP1325-20131115|10854_1  93 LHIAAIFNHTQIVDLLLEAGADPTVKNSE 121
                  9**********************998876 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0046        10      18      45 ..      57      85 ..      46      90 .. 0.78
   2 !   26.8   0.0   1.7e-09   3.8e-06      15      49 ..      88     122 ..      82     123 .] 0.87

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0046
    PF13857.1 18 tpLhlAakggalevvrlLl.apgadlnlr 45
                   L  A+k+g+++ v+  l a+ +++n +
  MMETSP1325-20131115|10854_1 57 EGLRDAIKNGDVDGVKSVLrAAAECANYK 85
                 56889***********9997555555555 PP

  == domain 2    score: 26.8 bits;  conditional E-value: 1.7e-09
    PF13857.1  15 ggntpLhlAakggalevvrlLlapgadlnlrdsdg 49 
                  + ++ Lh+Aa  +++++v+lLl++gad+++++s++
  MMETSP1325-20131115|10854_1  88 QDQSMLHIAAIFNHTQIVDLLLEAGADPTVKNSEN 122
                  44599***************************986 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.3     3e+03       9      23 ..      62      76 ..      61      83 .. 0.68
   2 !   31.3   0.0   4.2e-11   9.5e-08       6      32 ..      93     119 ..      89     120 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 1.3
                 HHHTTHHHHHHHHHH CS
   PF00023.25  9 AalrgnlevvklLls 23
                 A+++g+++ vk  l 
  MMETSP1325-20131115|10854_1 62 AIKNGDVDGVKSVLR 76
                 778888777765555 PP

  == domain 2    score: 31.3 bits;  conditional E-value: 4.2e-11
                  HHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25   6 LHlAalrgnlevvklLlsqGAdlnaqd 32 
                  LH+Aa+ +++++v lLl++GAd+++++
  MMETSP1325-20131115|10854_1  93 LHIAAIFNHTQIVDLLLEAGADPTVKN 119
                  9**********************9998 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         2   4.6e+03       9      19 ..      62      72 ..      59      83 .. 0.61
   2 !   23.9   0.0   1.1e-08   2.6e-05       3      28 ..      90     115 ..      88     117 .. 0.93

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 2
    PF13606.1  9 Aasngrielve 19
                 A++ng ++ v+
  MMETSP1325-20131115|10854_1 62 AIKNGDVDGVK 72
                 66777665443 PP

  == domain 2    score: 23.9 bits;  conditional E-value: 1.1e-08
    PF13606.1   3 nTpLhlAasngrielveaLlengadi 28 
                  ++ Lh+Aa ++++++v++Lle+gad+
  MMETSP1325-20131115|10854_1  90 QSMLHIAAIFNHTQIVDLLLEAGADP 115
                  689**********************7 PP

>> PF03173.8  Putative carbohydrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   5.5e-05      0.13      51      78 ..      41      68 ..      31      75 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5.5e-05
                 -EEEEE-SS-EEEESSTTEEEEE----E CS
    PF03173.8 51 waiyFssirkilqveseefaiehinGDl 78
                 ++ +F+s+ k++ +++e+  ++ +nGD+
  MMETSP1325-20131115|10854_1 41 PNFFFHSQAKTYAPNGEGLRDAIKNGDV 68
                 689************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 655.00
//
Query:       MMETSP1325-20131115|10855_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.4   1.3      0.038   13.1   0.9    1.0  1  PF09371.5 Tex-like protein N-terminal domain
      0.093   12.7   2.9       0.24   11.4   2.0    1.8  1  PF11598.3 Cartilage oligomeric matrix protein


Domain annotation for each model (and alignments):
>> PF09371.5  Tex-like protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.9   5.5e-06     0.038      37     107 ..      14      86 ..      11      91 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 5.5e-06
    PF09371.5  37 ggLdevqlreleerleylrelekr.ketilksieeqgkltee.LkkkieaaetlteledlYlPykkkrrTkAq 107
                  g L e++l++l+++l+ l + + + +   lk+i+ ++   +  L+++i++++  +e + l +P k+ + +kA+
  MMETSP1325-20131115|10855_1  14 GLLKETKLQQLKRQLALLLQRNGQsQLGTLKTIDPKDREEARfLRNEIQKCNAGNETNALLQPHKEVKASKAD 86 
                  7799**********999877776515579****9887665545****************************97 PP

>> PF11598.3  Cartilage oligomeric matrix protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.0   3.5e-05      0.24      26      43 ..      34      66 ..      14      67 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.5e-05
    PF11598.3 26 e...............QvkEtalLRntIleCqa 43
                 +                ++E+++LRn I+ C a
  MMETSP1325-20131115|10855_1 34 RngqsqlgtlktidpkDREEARFLRNEIQKCNA 66
                 2555555555555555799************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 450.52
//
Query:       MMETSP1325-20131115|10857_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-08   32.5   5.8    6.9e-08   32.0   4.0    1.2  1  PF00397.21 WW domain


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   4.0   5.1e-12   6.9e-08       2      29 ..      39      66 ..      38      67 .] 0.89

  Alignments for each domain:
  == domain 1    score: 32.0 bits;  conditional E-value: 5.1e-12
                 --SEEE.E.E-.---EEEEETTT--EESS CS
   PF00397.21  2 ppgWeersddd.dGrvYYyNheTgetqWe 29
                 ++gWe+ +d + +G +Y+y++ TgetqWe
  MMETSP1325-20131115|10857_1 39 ADGWERLYD-EqNGAYYWYHADTGETQWE 66
                 589**9996.558***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|10856_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1138.27
//
Query:       MMETSP1325-20131115|10860_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|10859_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 397.69
//
Query:       MMETSP1325-20131115|10861_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.55
# Mc/sec: 178.64
//
Query:       MMETSP1325-20131115|10863_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.44    9.3   5.5       0.52    9.0   3.8    1.0  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
       0.96    8.7   7.2        1.2    8.5   5.0    1.1  1  PF01915.17 Glycosyl hydrolase family 3 C-terminal domain


Domain annotation for each model (and alignments):
>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   3.8   7.7e-05      0.52      54     115 ..      70     131 ..      48     138 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 7.7e-05
    PF10186.4  54 kklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlek 115
                  + +aa+ +++e +++ ++ e+  +++ +++ee  +kr +iee +  l+qr + +eas +  k
  MMETSP1325-20131115|10863_1  70 ASEAAESRASEAVEQARKAEEAVATATAQQEEEASKRLKIEEASVLLKQRAEEAEASVESTK 131
                  67888999999999999999999999999999999999999999999999999996666554 PP

>> PF01915.17  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.0   0.00017       1.2      23     113 ..      19     113 ..      11     135 .. 0.61

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00017
                  EESSHH......................HHHHHHHHHHHHHHTTSS---EEEEEET----HHHHHHHHH-SEEEE---......-S...--B---B-SS- CS
                  xxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxx RF
   PF01915.17  23 iGpnadgtvksgggsgavnpsy......lvtplegirarlskakvvveekgseveddeeiaeavaaakkaDvavvvvgewegegek...eeeseegdrtd 113
                  +G+ ad+    g gs  ++ +       + + + + +  ++ a++v ++k ++  +++  +eav++a+ka+ av+++ +++ e+ +   +      + ++
  MMETSP1325-20131115|10863_1  19 VGEGADDGADGGEGSVPTARPAavmawaVFAQWRANTTVAKGAAEVAAAKVASEAAESRASEAVEQARKAEEAVATATAQQEEEASkrlK-----IEEAS 113
                  79999998889999944444442333334444444444444555555555555559999*******************555444431220.....22333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1690  (0.12361); expected 273.4 (0.02)
Passed bias filter:                      597  (0.0436659); expected 273.4 (0.02)
Passed Vit filter:                        71  (0.0051931); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.41s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 653.12
//
Query:       MMETSP1325-20131115|10865_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 221.88
//
Query:       MMETSP1325-20131115|10864_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-28   99.3   0.0    2.4e-28   99.0   0.0    1.1  1  PF00141.18 Peroxidase


Domain annotation for each model (and alignments):
>> PF00141.18  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   0.0   1.8e-32   2.4e-28       2     111 ..      55     174 ..      54     205 .. 0.90

  Alignments for each domain:
  == domain 1    score: 99.0 bits;  conditional E-value: 1.8e-32
                  HHHHHHHHHH.........TT---HHHHHHHHHHTT-......--TTTTGGGSTTGGG-------HHHHHHHHHHHHHSTT.....S-HHHHHHHHHHHHHHH-----.--EE----------. CS
   PF00141.18   2 radvkaalka........drdmgpsllrlafhdcfvy......gGcdgsvlllapektapaNaslrkgldvldaikakleaacpgtvScADlialaardavelaggplvpvslGRrDatessas 111
                  +ad+ka +k+        +++++p  +rla+h+++ y      gGcdg+++++ pe+ +++N++l+k++ +l++ik+k++      +S+ Dl++la+++a+e++ggp+  ++ GR D+ + sas
  MMETSP1325-20131115|10864_1  55 KADLKAFFKTsdeswpsdYGNYAPFYVRLAWHCAGSYrtsdgrGGCDGGRQRFLPEEAWEDNTNLDKARGMLWPIKEKYGLG----LSWGDLFILAGTTAIESMGGPVLGFCAGRIDDADGSAS 174
                  67778778777778877799999999******************************************************95....*********************99*********998883 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1093.99
//
Query:       MMETSP1325-20131115|10866_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.47
# Mc/sec: 244.73
//
Query:       MMETSP1325-20131115|10867_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 564.48
//
Query:       MMETSP1325-20131115|10868_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 349.47
//
Query:       MMETSP1325-20131115|10870_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.064   13.1   1.6        0.1   12.5   1.1    1.3  1  PF02466.14 Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> PF02466.14  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.1   7.3e-06       0.1       6      88 ..      52     127 ..      46     128 .] 0.69

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.3e-06
   PF02466.14   6 tvlagvagfalGavyGlfmrsmhaatklfrslplke.qlkavlramkqrspssaknfavvgaiYsgiecaleglrgkndllnsv 88 
                       + g++lG+ +G+++++ +a++    s+ +   ++++++ ++++        f+ +   ++g++++ + +rg +d+ n+v
  MMETSP1325-20131115|10870_1  52 M----LFGVVLGGACGTAYGATDAIREHGLSALMDAgKVRRTMVQCRT----GLVVFGGFFSAFQGVKYLAATARGVHDPGNTV 127
                  4....4455555555555554444445555555555678888888888....7778888888999999**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 681.63
//
Query:       MMETSP1325-20131115|10869_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.067   11.7   0.0      0.071   11.6   0.0    1.1  1  PF06089.7 L-asparaginase II


Domain annotation for each model (and alignments):
>> PF06089.7  L-asparaginase II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   5.2e-06     0.071     172     220 ..      45      92 ..      36     137 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5.2e-06
    PF06089.7 172 eaeevelgvDGCgaPlfalpLkglArayaklasaagspeerakalerva 220
                   +e++e+g  GC +P++a+ ++g A a+a+  s+a+++  +++++ +v 
  MMETSP1325-20131115|10869_1  45 CEEAIECGDEGCALPVWATAVEGAAAAVAEPDSPANASG-SRARFLEVR 92 
                  5678999**********************9988875444.233333344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 724.01
//
Query:       MMETSP1325-20131115|10871_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-12   47.5   0.2      2e-12   46.7   0.1    1.4  1  PF00082.17 Subtilase family


Domain annotation for each model (and alignments):
>> PF00082.17  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   0.1   1.4e-16     2e-12     104     245 ..       7     196 ..       2     251 .. 0.70

  Alignments for each domain:
  == domain 1    score: 46.7 bits;  conditional E-value: 1.4e-16
                  S-SEEEE----BHHHHHHHHHHHHHHHHHHHCC---EEEEE------BTTTT........GCCTTTTTTTEEE--BE......CCS---TCEEEE...........................................TTB.....----BB----SSEGG--...-EEEEE-S-TTCHHHH---CCCHHHHECC--HH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxx......xxxxxxxxxxxx...........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00082.17 104 kadvinmslGedsgtnssdssaileaavqaanesgvlfVvsaGNsgpsgstt........vgsPgtsksvitVgayt......dsdkladfsnyg...........................................gpsadgrlkpdivapGgniastvntsdkygyqsmsGTSmAsPhvagaaAlllqanpnltpe 245
                  +++v++ s+Ged+g  s+++++ ++  + +a  +gv++ +++G+sg +   +         ++P++s  v++Vga++           adfs+ g                                           g +  gr+ pd++a G++++  ++++  y   +  GTS+++P  ag++ l+ ++  +   +
  MMETSP1325-20131115|10871_1   7 QPSVVSTSYGEDEGSTSEEYATRVQVEFMKAGMRGVTLLFASGDSGVASMFSgktctqfsPQWPAGSPWVTAVGATSgvtteiA----ADFSSGGfsnrwampdyqrsvvteyimqnqdlvksyveqdllpptmitpnGTM-AGRAFPDVSAAGEDFMIVLDGNV-Y---TVDGTSASTPVFAGVVSLVNEQRHKAGLS 196
                  569********99*******************************555444444445567799****9999*******4444440....55555544444444444444455555555555555666666666777665777.9**************98888876.4...46*****************9977776444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1184.35
//
Query:       MMETSP1325-20131115|10873_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   14.7   0.0      0.033   13.7   0.0    1.4  2  PF07039.6 SGF29 tudor-like domain
      0.025   14.2   0.2      0.045   13.4   0.1    1.4  1  PF09038.5 Tumour suppressor p53-binding protein-1 Tudor
      0.034   14.1   0.0      0.049   13.6   0.0    1.3  1  PF05641.7 Agenet domain


Domain annotation for each model (and alignments):
>> PF07039.6  SGF29 tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   7.2e-06     0.033      66     121 ..      24      74 ..      20      81 .. 0.86
   2 ?   -2.8   0.0       0.9   4.1e+03      86      99 ..      92     105 ..      90     113 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 7.2e-06
    PF07039.6  66 tsklaefpkgskVLAlYPdTtaFYkAtVvatpkkkedeykleFeddeeedkereVk 121
                  ++ +a f+ g ++ A+Y   +++Y++++ ++  +++++y++ ++d ++e+   +V+
  MMETSP1325-20131115|10873_1  24 PQLTAGFSVGDRIEARYRGKSSYYPGKIRQV--NADGTYDISYNDGDHEQ---RVR 74 
                  5567889************************..99**********99775...444 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.9
    PF07039.6  86 taFYkAtVvatpkk 99 
                  ta Y+A V ++ ++
  MMETSP1325-20131115|10873_1  92 TAEYEARVARAEQA 105
                  66688888877543 PP

>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   9.8e-06     0.045       5      42 ..      32      69 ..      28      93 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 9.8e-06
                 -----EEE-ST---BB---EEEE-----EEEE-----E CS
    PF09038.5  5 vglrvvakwssngyfysgkitkdagegkykllfddgye 42
                 vg r+ a++  +  +y gki +   +g y + ++dg  
  MMETSP1325-20131115|10873_1 32 VGDRIEARYRGKSSYYPGKIRQVNADGTYDISYNDGDH 69
                 899********************************964 PP

>> PF05641.7  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.1e-05     0.049       1      48 [.      30      74 ..      30      92 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.1e-05
    PF05641.7  1 fskGseVEVsseeeglrgaWfrAkVlkelkeskykveyddlsledges 48
                 fs G+++E + +    + +++++k++ ++ + +y ++y d + e++  
  MMETSP1325-20131115|10873_1 30 FSVGDRIEARYRG---KSSYYPGKIRQVNADGTYDISYNDGDHEQRVR 74
                 7889999999976...99*********************999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       500  (0.0365711); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 663.99
//
Query:       MMETSP1325-20131115|10872_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.40s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|10876_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 278.85
//
Query:       MMETSP1325-20131115|10875_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-18   66.1   0.0    2.3e-18   65.4   0.0    1.4  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    3.2e-15   55.7   0.0    5.1e-15   55.1   0.0    1.3  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    2.9e-10   39.6   0.0    4.5e-10   39.0   0.0    1.3  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.0     5e-22   2.3e-18       1      65 [.      86     151 ..      86     156 .. 0.95

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 5e-22
                  EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHHHHHHHHHTTEBET CS
   PF00076.17   1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseedaekAlealngkklg 65 
                  l V n+++d++e +L elF+ fG+i +i l +d etg s+gfafV F  +edae+A+eal+g+ ++
  MMETSP1325-20131115|10875_1  86 LRVMNISEDTKEADLQELFERFGRIFRIYLAKDrETGESRGFAFVSFSRREDAERAMEALQGYGYD 151
                  5699**********************************************************8765 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   0.0   1.1e-18   5.1e-15       1      59 [.      86     145 ..      86     153 .. 0.96

  Alignments for each domain:
  == domain 1    score: 55.1 bits;  conditional E-value: 1.1e-18
    PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedAqkalkkl 59 
                  l+v++++++++e+dl e+f+++g++ ++ + +++  g++rgfAfv f+ +edA++a+++l
  MMETSP1325-20131115|10875_1  86 LRVMNISEDTKEADLQELFERFGRIFRIYLAKDREtGESRGFAFVSFSRREDAERAMEAL 145
                  79*******************************************************987 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0     1e-13   4.5e-10       1      56 []     100     160 ..     100     160 .. 0.93

  Alignments for each domain:
  == domain 1    score: 39.0 bits;  conditional E-value: 1e-13
    PF13893.1   1 LyklfskfGkverikifrkk.....ggqAfvefdtveaArkakeylngvklygktLkveys 56 
                  L +lf++fG++ ri++ ++      +g+Afv f+ +e+A++a+e+l+g  ++   Lk+e++
  MMETSP1325-20131115|10875_1 100 LQELFERFGRIFRIYLAKDRetgesRGFAFVSFSRREDAERAMEALQGYGYDHLILKIEWA 160
                  568*********************99**********************7777779999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.39s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 887.54
//
Query:       MMETSP1325-20131115|10879_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.5   0.3       0.19   11.1   0.2    1.1  1  PF12934.2 FTO C-terminal domain
       0.36    8.6   1.9       0.41    8.4   1.3    1.0  1  PF05109.8 Herpes virus major outer envelope glycoprotein (BLLF1)
        0.9    9.1   3.3       0.85    9.2   1.7    1.4  1  PF08487.5 Vault protein inter-alpha-trypsin domain
        1.8    7.2   5.5          2    7.1   3.8    1.0  1  PF14362.1 Domain of unknown function (DUF4407)
        6.2    7.2  10.7        4.3    7.7   2.3    2.8  3  PF09072.5 Translation machinery associated TMA7


Domain annotation for each model (and alignments):
>> PF12934.2  FTO C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2     7e-05      0.19      93     146 ..      44      97 ..      32      98 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 7e-05
                  HT-------S--TTTTTTHHHHHHHHHHHHHHHHHHSSSGGG---TTTS----S CS
    PF12934.2  93 lkrasetteqkeealdvllelLterkelReewaaRtrskiyeelPadqrPvdlP 146
                  +  as++++ +  a+ +l el +e +  Ree++aR+ s+  ++ Pa  r  + P
  MMETSP1325-20131115|10879_1  44 ASGASQEKARSRSAMGALAELAHEEEARREEFRARVASTTPAAAPAASREAEWP 97 
                  3445567777888999999999***********************998877666 PP

>> PF05109.8  Herpes virus major outer envelope glycoprotein (BLLF1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   1.3   0.00015      0.41     682     772 ..      11      99 .]       5      99 .] 0.82

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00015
    PF05109.8 682 knatspsapssqktavptvtsaggkansttketsgstlrastepttdeGassttvynattylppstssklrprwtftsp...pvttkqatvpvP 772
                  ++a  ++a+ s+ +  p +  + gka + +k++++ + +  ++     Ga +       ++   +   ++r r ++t+p   p++ ++a++p P
  MMETSP1325-20131115|10879_1  11 ERACKAEAALSKASKGPMGNGTAGKAKAKAKHKASGASQEKARSRSAMGALAE-----LAHEEEARREEFRARVASTTPaaaPAASREAEWPAP 99 
                  6788888999999999**************99988877778888888888887.....455667788899999999988555778899999988 PP

>> PF08487.5  Vault protein inter-alpha-trypsin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.7   0.00031      0.85      58     106 ..      31      84 ..      27      89 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00031
    PF08487.5  58 gkvyegeikekekaqkeyek.akar...GksaglvkqegremekFtvsv.nvap 106
                  g + ++++k k+ka+   ++ a++r   G+ a+l ++e++  e+F+++v +  p
  MMETSP1325-20131115|10879_1  31 GTAGKAKAKAKHKASGASQEkARSRsamGALAELAHEEEARREEFRARVaSTTP 84 
                  5566778888888876554425544333888999**************965544 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.8   0.00074         2     163     236 ..      10      86 ..       5      94 .. 0.63

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00074
    PF14362.1 163 eevqceleGt...ggtgvaGkGpvykekk.ealdaaqaeletlkaq.ldaaqaeleankrkaaleeeraakvaeeqaan 236
                  +e+ c +e     +++g +G+G++ k+k  ++++a  a  e+++++    a ael   ++++a +ee  a+va +++a+
  MMETSP1325-20131115|10879_1  10 QERACKAEAAlskASKGPMGNGTAGKAKAkAKHKASGASQEKARSRsAMGALAELA--HEEEARREEFRARVASTTPAA 86 
                  44455555446667889999998887765055555557777777774344555565..777777777777777666654 PP

>> PF09072.5  Translation machinery associated TMA7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   2.3    0.0016       4.3      28      61 ..       5      37 ..       2      41 .. 0.82
   2 ?    3.0   2.2     0.046   1.3e+02      29      53 ..      35      59 ..      32      62 .. 0.86
   3 ?    0.5   0.0      0.28   7.6e+02      32      51 ..      65      84 ..      59      91 .. 0.75

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0016
    PF09072.5 28 FkekqkeeekakkelaakakkkgpLvgggikksg 61
                 F  k +e + + +++  ka +kgp++ g   k++
  MMETSP1325-20131115|10879_1  5 FSSKIQERACKAEAALSKA-SKGPMGNGTAGKAK 37
                 88999999999********.9*****99555554 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.046
    PF09072.5 29 kekqkeeekakkelaakakkkgpLv 53
                 k+k k+++ka  + ++ka ++ +++
  MMETSP1325-20131115|10879_1 35 KAKAKAKHKASGASQEKARSRSAMG 59
                 89999999**999999999888775 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.28
    PF09072.5 32 qkeeekakkelaakakkkgp 51
                   eee+ ++e +a++++  p
  MMETSP1325-20131115|10879_1 65 AHEEEARREEFRARVASTTP 84
                 56888888898888876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       708  (0.0517847); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|10880_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.56
# Mc/sec: 243.91
//
Query:       MMETSP1325-20131115|10878_1  [L=223]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.049   13.4   6.9      0.067   13.0   4.8    1.1  1  PF06217.7  GAGA binding protein-like family
       0.21   11.3  14.7       0.31   10.7  10.2    1.3  1  PF06459.7  Ryanodine Receptor TM 4-6
       0.24   10.1   5.8       0.27   10.0   4.0    1.0  1  PF00740.13 Parvovirus coat protein VP2
        0.5    8.6  14.8       0.66    8.2  10.3    1.1  1  PF03344.10 Daxx Family
          1    8.6  13.7        1.5    8.1   9.5    1.3  1  PF14153.1  Spore coat protein CotO
        1.8    8.2  17.2        2.1    8.0  11.9    1.1  1  PF07897.6  Protein of unknown function (DUF1675)


Domain annotation for each model (and alignments):
>> PF06217.7  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   4.8     3e-05     0.067      29     184 ..      29     189 ..      16     206 .. 0.45

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3e-05
    PF06217.7  29 lqlmssia..erdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvens.pvgvqvls..etksihslqmlkh.....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkk.sekskkkvkkesader 184
                  l l+s+ +   rd+  r+ n+a  ++++++ +r  ++ ++++     +     r+    + +  + s  ++ ++++   +    ++q   +     ++++++    reee  ea+  ++++++++e+++     ++++p ++ ++++k + +++ k + k+e + + 
  MMETSP1325-20131115|10878_1  29 LVLLSMWSrcSRDEISRDGNVAAEQRRGSFSTRARSYRKKESSGGFGKTGSFSRRAGSSSKKESSGSvVKTRGTVPvrSSAVSPHHQ---QpgcdaQDTQNHDSTEREEEAGEAEAQRKSNNTEREAEND---TTTASPEAEAKTEAKTEaKTEAKTEAKMEAKAQA 189
                  556666555689**********************99988887765544444555444444444333332222233300222222222...2222212222222223333333322222222222222222...2222222222221111101122222222222222 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7  10.2   0.00014      0.31      59     151 ..     106     203 ..      43     214 .. 0.56

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00014
    PF06459.7  59 r......hdaepgLg..dvsevepeepptpeeaaaekkelkeeeeepkseaekadledgekeekaeeeseekpeeakaakkkaekkkekkaekeeaaeaei 151
                  r      h+++pg +  d  + + +e + ++++a+ +++++++e e++++++ a+ e++ k   +e+++e+k e +++ak++a+ ++   a+ e +a+ae 
  MMETSP1325-20131115|10878_1 106 RssavspHHQQPGCDaqDTQNHDSTEREEEAGEAEAQRKSNNTEREAENDTTTASPEAEAK---TEAKTEAKTEAKTEAKMEAKAQAMTPAKAESKAGAET 203
                  1333334666666321133333333333333444444455666666666666666666666...6666666666666677776666666666666666654 PP

>> PF00740.13  Parvovirus coat protein VP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.0   0.00012      0.27     259     422 ..      46     207 ..      21     218 .. 0.54

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00012
   PF00740.13 259 atlkvkarktrkgdtaqqpknwlpgPaqvglvpeqefeassagafkvpvvrsaststkeqptkledrk.angaprytyakqhgedtaaskeaeerltfdakneeegettqkeknqrlptseeeikelnavavketln.lktneqsgkteinltnvknsyllpgavw 422
                  +     a+++r+g+++++ +++  + +  g+ ++ +f++ ++ + k     s++++  + p++++  + ++ +p+  +++++++d++ ++e+  + + ++k+++++++++++  +  p  e +++  +++++k+  +  ++ e ++++    + + + ++ +ga+ 
  MMETSP1325-20131115|10878_1  46 DG--NVAAEQRRGSFSTRARSYRKKESSGGFGKTGSFSRRAGSSSKKESSGSVVKTRGTVPVRSSAVSpHHQQPGCDAQDTQNHDSTEREEEAGEAEAQRKSNNTEREAENDTTTASPEAEAKTE--AKTEAKTEAKtEAKMEAKAQAMTPAKAESKAGAETGAML 207
                  33..3588999999999999999998888889999999999988888877755555555555555444144555555555555555555434444443333333333333333333333333333..333333322211222223333333344555555555555 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  10.3   0.00029      0.66     407     504 ..      90     185 ..      76     215 .. 0.46

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00029
   PF03344.10 407 qerkrrgkesr..skdkslassestesPllasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedee 504
                  +e +++ +++r     +s a s ++++P+  +q++++++++e+ee+  + e + + ++ e e     e++ + a++e e   ea++e + +++ e + e 
  MMETSP1325-20131115|10878_1  90 KESSGSVVKTRgtVPVRSSAVSPHHQQPGCDAQDTQNHDSTEREEEAGEAEAQRKSNNTEREA----ENDTTTASPEAEAKTEAKTEAKTEAKTEAKMEA 185
                  333333333331122334444555667777777776666666666655544443333333333....333333333333333333333222222222111 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   9.5   0.00064       1.5      30     122 ..     124     191 ..      80     217 .. 0.47

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00064
    PF14153.1  30 tfikkkkkkkeeekensnekkkekeeeqkeekaeveseeeaeeaesedeqesseqeeiaqeve.eeeeeeeekqeevekekeaekeeteleeek 122
                  t                          q++ + e e+e  ++ea++++++ ++e e+ +  +  e+e++ e k+e + ++k+++k e++ ++  
  MMETSP1325-20131115|10878_1 124 T--------------------------QNHDSTEREEEAGEAEAQRKSNNTEREAENDTTTASpEAEAKTEAKTEAKTEAKTEAKMEAKAQAMT 191
                  2..........................2222222222222222222222222222222222222222222222222222222222222222222 PP

>> PF07897.6  Protein of unknown function (DUF1675)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0  11.9   0.00094       2.1      78     220 ..      50     190 ..       4     201 .. 0.64

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00094
    PF07897.6  78 elqslrrleakrkrlekessgvsngddqdsveaakaaasqrdkesskavetg..seeatsssssgpsssglkekdvlveaaasgrakderssvsnletkaesssagtepseakanksneekkekrsrkessvdtnskgeaskkil 220
                    +++r+ +  r r+ ++++  ++  ++ s +  +a+ s ++++s++ v+t   ++ ++s +s + ++ g + +d++++     + ++e++   +++ k++++++++e  +++a  + e+k e ++  +++ +t+ k+ea+ + +
  MMETSP1325-20131115|10878_1  50 AAEQRRGSFSTRARSYRKKESSGGFGKTGSFS-RRAGSSSKKESSGSVVKTRgtVPVRSSAVSPHHQQPGCDAQDTQNH---DSTEREEEAGEAEAQRKSNNTEREAENDTTTASPEAEAKTEAKTEAKTEAKTEAKMEAKAQAM 190
                  45678888899999988666655555333433.3444444444444444443113333333333333444444444444...345566777778888888888888888888888888888888777777788888888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1322  (0.096694); expected 273.4 (0.02)
Passed bias filter:                      522  (0.0381802); expected 273.4 (0.02)
Passed Vit filter:                       111  (0.00811878); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.84u 0.41s 00:00:01.25 Elapsed: 00:00:00.64
# Mc/sec: 834.98
//
Query:       MMETSP1325-20131115|10881_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-07   31.5   1.0      1e-07   31.5   0.7    1.7  1  PF08312.7 cwf21 domain


Domain annotation for each model (and alignments):
>> PF08312.7  cwf21 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.7   7.4e-12     1e-07       6      43 ..      98     138 ..      94     141 .. 0.91

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 7.4e-12
    PF08312.7   6 r...ReIEvkvlelrdrLEeeglseeeIeervdklRekLlk 43 
                  r   R++E +v++lrd+LE +g +  +Iee +++ R+ Llk
  MMETSP1325-20131115|10881_1  98 RelmRKVETEVMLLRDELEAKGTDATTIEEACAARRTVLLK 138
                  4555********************************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 863.69
//
Query:       MMETSP1325-20131115|10882_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.32s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 714.11
//
Query:       MMETSP1325-20131115|10885_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.4   0.0      0.045   13.6   0.0    1.4  1  PF00583.19 Acetyltransferase (GNAT) family


Domain annotation for each model (and alignments):
>> PF00583.19  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.3e-06     0.045      30      58 ..     167     196 ..     121     212 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.3e-06
                  EEEESGGGTTTT-HHHHHHHHHHHHHH.TT CS
   PF00583.19  30 glaVspeyrgqGiGkaLleallekare.rg 58 
                   +  +p++r +G+++a +e++  +are ++
  MMETSP1325-20131115|10885_1 167 QVGHMPAFRSHGVAHAAVEHVQMRAREpQK 196
                  56667*********************9555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       679  (0.0496635); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 1061.24
//
Query:       MMETSP1325-20131115|10884_1  [L=302]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-35  121.6   0.5    3.4e-35  120.6   0.4    1.5  1  PF08502.5 LeuA allosteric (dimerisation) domain


Domain annotation for each model (and alignments):
>> PF08502.5  LeuA allosteric (dimerisation) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.6   0.4   2.5e-39   3.4e-35       3     132 ..     123     269 ..     121     270 .. 0.92

  Alignments for each domain:
  == domain 1    score: 120.6 bits;  conditional E-value: 2.5e-39
    PF08502.5   3 tdedleaLvkdelleaeerfkleklqvssgedelstatvklevkdgeekeasaeGnGpvdAllnAlrkilgveikLldYsvhavtegtdalaevrVelev..............ddgkk......vsgvGvdsdiveASlkAlisalnrl 132
                   d+dleaLv+d++  + e+++l +lqv++g ++++tatv++  +dg  + ++a+G+GpvdA+++A++k++gv++kL+ Y ++avteg+dala++rV+++               +          +sg G d d+v+AS++A++sa+n++
  MMETSP1325-20131115|10884_1 123 EDDDLEALVSDTAFASDEHWQLSDLQVTTGMSGIPTATVTMVGPDGVARFVAATGEGPVDAVYKAIDKLIGVKLKLETYGMQAVTEGIDALATTRVTVSPmmdstfmataihsqS---GknqvrtFSGSGSDGDVVVASARAYVSAINKM 269
                  69*************************************************************************************************8777777777666541...0445667***********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.35s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 1419.02
//
Query:       MMETSP1325-20131115|10886_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-26   91.7   0.0    4.6e-26   91.2   0.0    1.1  1  PF05903.9 PPPDE putative peptidase domain


Domain annotation for each model (and alignments):
>> PF05903.9  PPPDE putative peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.2   0.0   3.4e-30   4.6e-26      27     136 ..       8     109 ..       3     117 .. 0.94

  Alignments for each domain:
  == domain 1    score: 91.2 bits;  conditional E-value: 3.4e-30
    PF05903.9  27 GkklegiyhtgvevygkeyalggkekeesgitelkpkttsegakfresielgeTevteeevreileelsaeyhgdkYnLiskNCnhFtddlvdlLtgkkiPkwinrlari 136
                  G    g +htgv+v g+ey++ g     +g++   p++  +gakfr+si++g+ e  e++ ++i++el+ ++++d+Yn+++kNCnhF+d+lv++L +k+iP + nrla  
  MMETSP1325-20131115|10886_1   8 GL---GLFHTGVQVGGREYTFAG----GGGVFDMTPQE-APGAKFRQSIDMGTFEGGESKLASIIDELKPQFKPDSYNILTKNCNHFSDALVRRLLAKPIPGYLNRLAML 109
                  44...88**************77....79*********.*******************************************************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 981.15
//
Query:       MMETSP1325-20131115|10888_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 853.70
//
Query:       MMETSP1325-20131115|10892_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        79  (0.00577823); expected 273.4 (0.02)
Passed bias filter:                       78  (0.00570509); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.30s 00:00:00.64 Elapsed: 00:00:00.44
# Mc/sec: 571.86
//
Query:       MMETSP1325-20131115|10891_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 875.40
//
Query:       MMETSP1325-20131115|10893_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-06   25.5  23.1    9.7e-06   25.1  16.0    1.3  1  PF10500.4  Nuclear RNA-splicing-associated protein
  ------ inclusion threshold ------
      0.038   11.8   6.3       0.04   11.8   4.4    1.0  1  PF06933.6  Special lobe-specific silk protein SSP160
       0.14   12.8   7.4      0.041   14.6   3.0    1.8  2  PF08015.6  Fungal mating-type pheromone
       0.19   11.8  14.2       0.36   10.9   9.8    1.5  1  PF11928.3  Domain of unknown function (DUF3446)
       0.54    9.6  25.0       0.62    9.4  17.3    1.1  1  PF09184.6  PPP4R2
       0.86    9.1  23.0          1    8.8  15.9    1.2  1  PF04889.7  Cwf15/Cwc15 cell cycle control protein
       0.96    7.5  11.7       0.97    7.4   8.1    1.1  1  PF03115.9  Astrovirus capsid protein precursor
        1.3    8.2  22.4        1.5    8.0  15.5    1.3  1  PF07423.6  Protein of unknown function (DUF1510)
        1.6    9.1  18.1        1.8    8.9  12.5    1.1  1  PF04520.8  Senescence regulator
        1.8    8.1  17.3        2.2    7.8  12.0    1.1  1  PF02862.12 DDHD domain
        2.8    7.0  13.4        2.9    6.9   9.3    1.1  1  PF06524.7  NOA36 protein
          3    5.9  14.3        3.2    5.8   9.9    1.2  1  PF03276.9  Spumavirus gag protein
        3.2    7.0  18.2        3.5    6.9  12.6    1.1  1  PF14153.1  Spore coat protein CotO
        3.4    7.2  17.4          4    7.0  12.1    1.1  1  PF03105.14 SPX domain
        3.9    6.3  14.6        4.2    6.2  10.1    1.1  1  PF05460.8  Origin recognition complex subunit 6 (ORC6)
        4.9    7.0  22.3        5.4    6.9  15.4    1.1  1  PF12316.3  Segment polarity protein dishevelled (Dsh) C terminal
        5.4    5.2  25.0        5.8    5.1  17.3    1.0  1  PF03344.10 Daxx Family
        5.6    6.2   9.5        6.6    6.0   6.6    1.1  1  PF07565.8  Band 3 cytoplasmic domain
        7.1    7.1  15.5        4.9    7.6   9.8    1.5  1  PF03964.10 Chorion family 2
        7.7    4.5  15.3        9.2    4.2  10.6    1.1  1  PF04415.7  Protein of unknown function (DUF515)
        9.1    4.7   8.6        9.3    4.7   5.9    1.2  1  PF03348.10 Serine incorporator (Serinc)
        9.7    4.0  15.7         10    3.9  10.9    1.1  1  PF12877.2  Domain of unknown function (DUF3827)


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1  16.0   1.6e-08   9.7e-06      45     137 ..      22     114 ..       6     119 .] 0.44

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 1.6e-08
    PF10500.4  45 srkkrekkkkkrrers.ssssssssssssssssssskseekrkkrkkkkkkrekkkekkekkklkkkgkkkeaeerrvkeaapepsldlwqkea 137
                  +++++++ + + r+ s +ssssssssssssssssss++ +++++r+++++++++ + +  + +    +   e+ +   k+aa+    +  ++e+
  MMETSP1325-20131115|10893_1  22 GHNENAVARSNIRRLSsTSSSSSSSSSSSSSSSSSSAARQQQQQRQQQQQQQDQERGDDSEDEGPVSED-DEQGANGKKKAAASEDSEDEDSEE 114
                  555555555555544413444444444444445555555555555555544333333333322222222.222333444444444444333333 PP

>> PF06933.6  Special lobe-specific silk protein SSP160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   4.4   6.4e-05      0.04      75     124 ..      13      62 ..       2      83 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.4e-05
    PF06933.6  75 grfsviikasfnliamisanvqaiqsgsgsasssssssatstssststts 124
                  g++ v   +  n  a+  +n++ + s s s+sssssss++s+sss++   
  MMETSP1325-20131115|10893_1  13 GKWNVRYATGHNENAVARSNIRRLSSTSSSSSSSSSSSSSSSSSSAARQQ 62 
                  677777788889999999*********99999999999988888876554 PP

>> PF08015.6  Fungal mating-type pheromone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   3.0   6.6e-05     0.041      16      60 ..      37      80 ..       2      88 .. 0.55
   2 ?   -0.9   0.1       4.4   2.8e+03      43      47 ..     103     107 ..      80     118 .. 0.59

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 6.6e-05
    PF08015.6 16 saessesalfasssspspspalsssasasddevlavpvDaErrgg 60
                 s+ ss+s+++ ssss+s s++++ ++++++ + ++   D+Er+ +
  MMETSP1325-20131115|10893_1 37 SSTSSSSSSSSSSSSSS-SSSSAARQQQQQRQQQQQQQDQERGDD 80
                 12222222222222221.233578888888888899999999876 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 4.4
    PF08015.6  43 asdde 47 
                  as+d+
  MMETSP1325-20131115|10893_1 103 ASEDS 107
                  22222 PP

>> PF11928.3  Domain of unknown function (DUF3446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   9.8   0.00058      0.36      37      64 ..      38      65 ..      20      77 .. 0.47

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00058
    PF11928.3 37 sssssssssssassqssslscsvsqsep 64
                 s+sssssssss+ss+sss s++ +q+++
  MMETSP1325-20131115|10893_1 38 STSSSSSSSSSSSSSSSSSSAARQQQQQ 65
                 2222222222222222222222222222 PP

>> PF09184.6  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4  17.3   0.00099      0.62     201     283 ..      39     118 ..      18     119 .] 0.51

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00099
    PF09184.6 201 lsngsslnespdssqdkekkleeyyekesseaaadeddeakdsdvknkkaddeedddedsdyieekelkedeeedeteeeeee 283
                   s++ss  +s++ss+ ++++    ++++++++++ ++d++ + d +++ + +e+d++ ++   +++++ ed e+++ eeeeee
  MMETSP1325-20131115|10893_1  39 TSSSSSSSSSSSSSSSSSSA--ARQQQQQRQQQQQQQDQERGDDSEDEGPVSEDDEQGANG-KKKAAASEDSEDEDSEEEEEE 118
                  33333333333333333333..334445556666666666677777788877777666665.344444444444444444443 PP

>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  15.9    0.0017         1      51     149 ..      25     118 ..       7     119 .] 0.42

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0017
    PF04889.7  51 eeelekrdlraeLleaEaaakakkekskkkralenakkeeeleaakeaeededeekeakrkkkleeareidaddsdkseee..sdesdddsdddddeDeta 149
                  e+++++ ++r+ L  +  ++++++      ++ ++++++++ ++++++++++++++++ r  ++e++ ++ +dd++ ++ +     s+d++d+d++e+e++
  MMETSP1325-20131115|10893_1  25 ENAVARSNIRR-LSSTSSSSSSSS------SSSSSSSSSSAARQQQQQRQQQQQQQDQERGDDSEDEGPVSEDDEQGANGKkkAAASEDSEDEDSEEEEEE 118
                  44444444443.333332222222......11222222222222222222222222333555677777777777655554444344444444344444443 PP

>> PF03115.9  Astrovirus capsid protein precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   8.1    0.0016      0.97     632     709 ..      41     116 ..       3     119 .] 0.54

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0016
    PF03115.9 632 easkilfelrtalpeekaelseleeravedaeepaedlvseeetdtetestedesdeldrfdlkassgsesededenn 709
                  ++s+ + + ++   +++++   +++++ ++++++++++  ++ +d    s++de+   ++ + +as++se+ed++e++
  MMETSP1325-20131115|10893_1  41 SSSSSSSSSSS--SSSSSSAARQQQQQRQQQQQQQDQERGDDSEDEGPVSEDDEQGANGKKKAAASEDSEDEDSEEEE 116
                  22222222212..2222222222233333344445555566666666667777777999**************98654 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0  15.5    0.0024       1.5      38     104 ..      51     117 ..      16     119 .] 0.61

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0024
    PF07423.6  38 nskskkasadeeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekekkee 104
                  +s+s++++a +++++++++++++++e+ +++e+e   +ed+e+ ++ +kk  +se+ e+e++e++ee
  MMETSP1325-20131115|10893_1  51 SSSSSSSAARQQQQQRQQQQQQQDQERGDDSEDEGPVSEDDEQGANGKKKAAASEDSEDEDSEEEEE 117
                  2223333333666677777777777777777777777777777444444444444444333333332 PP

>> PF04520.8  Senescence regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  12.5    0.0029       1.8      24     105 ..      28     118 ..      13     119 .] 0.54

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0029
    PF04520.8  24 leesk.........rssssssalkastaaaasssaraipkiekgeraaaksakaassapvnvPdwskilksrrrrseeeededdeedddae 105
                   ++s+         +ssssss+ ++s+ ++a+++++++++ +++++++++    +   pv+  d++ +  +++++ +e+++++d+e++++e
  MMETSP1325-20131115|10893_1  28 VARSNirrlsstssSSSSSSSSSSSSSSSSAARQQQQQRQQQQQQQDQERGDDSEDEGPVSEDDEQGANGKKKAAASEDSEDEDSEEEEEE 118
                  4444444454443322222222222222223333333333335668888888999999********9988766666666666666666654 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  12.0    0.0036       2.2      82     170 ..      19     115 ..       6     119 .] 0.42

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0036
   PF02862.12  82 stkksklgaleekesltnigkavkqsvesltsslsegiasslrnsslslssedeeseeeseasklsqks...........ksekkkeseeetkeeeeeak 170
                  ++++++  a++  + ++++++ ++ s++s+ ss+s+++ s+ r+++++++++++++++e    +++  +           +++kk++++e++++e++e++
  MMETSP1325-20131115|10893_1  19 YATGHNENAVAR-SNIRRLSSTSSSSSSSSSSSSSSSSSSAARQQQQQRQQQQQQQDQERGDDSED--EgpvseddeqgaNGKKKAAASEDSEDEDSEEE 115
                  444444444443.66666666666666644444444444444443333333333333333332222..13456666655422222222222222222222 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   9.3    0.0046       2.9     224     287 ..      54     118 ..      20     119 .] 0.73

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0046
    PF06524.7 224 dlslstrsykfgrqtrgeesddeegygaykknlss.dkygdaksvnygyesdddeeesaedydee 287
                    s ++r+ +  rq++ ++ d+e+g ++  +   s d++ +a++ + +  s+d e+e++e+++ee
  MMETSP1325-20131115|10893_1  54 SSSSAARQQQQQRQQQQQQQDQERGDDSEDEGPVSeDDEQGANGKKKAAASEDSEDEDSEEEEEE 118
                  45667899999999999999999998887665444045555666666677777777666666665 PP

>> PF03276.9  Spumavirus gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   9.9    0.0052       3.2     446     575 ..      53     102 ..      12     113 .. 0.58

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0052
    PF03276.9 446 pasrgrGrgqrgrrsqpqeerrqqnsgrrssqpqrqqqdrsnqnnqrqsqvqnegergsggYnlRprtyqPqRYGggrgrrkneqParrseqgrsqsqqpqsearGeqsrtsgaarrqggrgnqnRnqrs 575
                  ++s +                                                                                 ar+++q+r+q+qq q + rG+ s+ +g++++ + +g +++ +  
  MMETSP1325-20131115|10893_1  53 SSSSS--------------------------------------------------------------------------------AARQQQQQRQQQQQQQDQERGDDSEDEGPVSEDDEQGANGKKKAA 102
                  33333................................................................................445555555555555555555555555555544444444433333 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  12.6    0.0056       3.5      40     104 ..      53     118 ..      10     119 .] 0.43

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0056
    PF14153.1  40 eeekensnekkkekeeeqkeekaev.eseeeaeeaesedeqesseqeeiaqeveeeeeeeeekqee 104
                  ++ ++++ +++++++++q+++++e   ++e ++ +++ deq +  ++++a +++ e+e++ee++ee
  MMETSP1325-20131115|10893_1  53 SSSSSAARQQQQQRQQQQQQQDQERgDDSEDEGPVSEDDEQGANGKKKAAASEDSEDEDSEEEEEE 118
                  111112222222222333333333302233333333333444444444444444443333333333 PP

>> PF03105.14  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  12.1    0.0064         4     149     202 ..      25     102 ..       3     119 .] 0.42

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0064
   PF03105.14 149 eql.......yieaksffsdheamagpsnsvqakeksqekndqlqkqsndeessqesdse.................r 202
                  e+        + +++s++s++++++++s s+++  ++q++++q+q+q++d+e+ ++s++e                  
  MMETSP1325-20131115|10893_1  25 ENAvarsnirRLSSTSSSSSSSSSSSSSSSSSSAARQQQQQRQQQQQQQDQERGDDSEDEgpvseddeqgangkkkaA 102
                  333444444423333333333333333333333333344444444444444444444444567776665443322220 PP

>> PF05460.8  Origin recognition complex subunit 6 (ORC6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  10.1    0.0068       4.2     113     190 ..      36     113 ..      11     119 .] 0.40

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0068
    PF05460.8 113 lfsTPtKsktlasalsa....sksssplkrrrklaneedgeeeeed.apswvstsirdsrleisrt.spskslgdesilfndes 190
                  l sT ++s++++s++s+    s+ +  ++ r+++++++d+e ++ +    +vs +       ++ +   +k + +e+++++d++
  MMETSP1325-20131115|10893_1  36 LSSTSSSSSSSSSSSSSssssSAARQQQQQRQQQQQQQDQERGDDSeDEGPVSEDD------EQGAnGKKKAAASEDSEDEDSE 113
                  33333333333333333221133333333333333333333333222222222222......2222233444444444444433 PP

>> PF12316.3  Segment polarity protein dishevelled (Dsh) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  15.4    0.0087       5.4      63     138 ..      38     109 ..      13     119 .] 0.38

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0087
    PF12316.3  63 sGsagsqhseGsrssgsnrsdgeakrakqereeagekkegsgsesehssrsslsrsateeapserssaasseksvr 138
                  s s++s  s  s+ss+s+ s +++++++ ++++++++ +  g +se++   s    + e+ + ++++aa+se s+ 
  MMETSP1325-20131115|10893_1  38 STSSSSSSSSSSSSSSSSSSAARQQQQQ-RQQQQQQQDQERGDDSEDEGPVSE---DDEQGANGKKKAAASEDSED 109
                  3333333333333333333333333332.222222222222333333222211...11222222333333333322 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  17.3    0.0093       5.8     417     504 ..      30     116 ..       7     119 .] 0.38

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0093
   PF03344.10 417 rskdkslassestesPllasqeseeeekaekeedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedee 504
                  rs+ + l+s++s++s + +s  s + ++a ++++++ +++++++++e +++  e+e + +e d++  +  ++++ +e++++e++e+ee
  MMETSP1325-20131115|10893_1  30 RSNIRRLSSTSSSSSSSSSSSSSSSSSSAARQQQQQRQQQQQQQDQERGDD-SEDEGPVSEDDEQGANGKKKAAASEDSEDEDSEEEE 116
                  233333333333333334444444444444444444434443333333333.333333333333333322222222222222222222 PP

>> PF07565.8  Band 3 cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   6.6     0.011       6.6      98     152 ..      40     108 ..      17     114 .. 0.41

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.011
    PF07565.8  98 gkllsekk.............kaeqselslqkslelek.akeseslekveeekkkanekllrkipegaE 152
                  ++++s+ +             +++q+++++q+++++e+   ++++ +++e++++ an k +   +e++E
  MMETSP1325-20131115|10893_1  40 SSSSSSSSssssssssssaarQQQQQRQQQQQQQDQERgDDSEDEGPVSEDDEQGANGKKKAAASEDSE 108
                  222111111111111122211222222222222222210122333444466677777666666666666 PP

>> PF03964.10  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   9.8    0.0079       4.9      25      81 ..      22      78 ..       4     100 .. 0.44

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0079
   PF03964.10 25 sYgrargnsgygrs..gslvssssdssAaaaAasalaalnaGsykvwkvpsyevdgayg 81
                 +++++   ++  r+  + ++ssss+ss+++ ++s++aa ++ + ++++  +++ +  +g
  MMETSP1325-20131115|10893_1 22 GHNENAVARSNIRRlsSTSSSSSSSSSSSSSSSSSSAARQQQQQRQQQQQQQDQE--RG 78
                 4444444344344443223333333333333344444444433333333333333..33 PP

>> PF04415.7  Protein of unknown function (DUF515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2  10.6     0.015       9.2     279     326 ..      30      75 ..      14      86 .. 0.51

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.015
    PF04415.7 279 vsesksastsvsessstssseslstkdspgdasilnsqrltlnsstsq 326
                   s+ +  s++ s+sss+sss+s+s++ s +  + ++ qr +++  + q
  MMETSP1325-20131115|10893_1  30 RSNIRRLSSTSSSSSSSSSSSSSSSSSSAA--RQQQQQRQQQQQQQDQ 75 
                  444444444444444444444433444443..4444444444433333 PP

>> PF03348.10  Serine incorporator (Serinc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   5.9     0.015       9.3     305     350 ..      42      87 ..      11     118 .. 0.53

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.015
   PF03348.10 305 aasnsssgklklsedkveeqkkeernesreeaakaaveegsepksa 350
                  ++s+sss+  + s+++  +q++++r+++++++++++ ++ +++  +
  MMETSP1325-20131115|10893_1  42 SSSSSSSSSSSSSSSSAARQQQQQRQQQQQQQDQERGDDSEDEGPV 87 
                  2222222222222222222223333333333333333333322222 PP

>> PF12877.2  Domain of unknown function (DUF3827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9  10.9     0.017        10     375     441 ..      30      95 ..       5     117 .. 0.52

  Alignments for each domain:
  == domain 1    score: 3.9 bits;  conditional E-value: 0.017
    PF12877.2 375 skkkrkrgevsksdadsedsevisersskeksgrpattpsvvkqqkk..tkeearkkdvpasgvdeqls 441
                  +++ r+ + +s s + s   + +s  ss+++++r+  ++ +++qq++  ++ + ++ + p s+ deq  
  MMETSP1325-20131115|10893_1  30 RSNIRRLSSTSSSSSSS---SSSSSSSSSSSAARQQQQQRQQQQQQQdqERGDDSEDEGPVSEDDEQGA 95 
                  22333333333332222...2233333333444444444444333330033344556667777777755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2202  (0.161059); expected 273.4 (0.02)
Passed bias filter:                      879  (0.064292); expected 273.4 (0.02)
Passed Vit filter:                       235  (0.0171884); expected 13.7 (0.001)
Passed Fwd filter:                        77  (0.00563195); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.94u 0.44s 00:00:01.38 Elapsed: 00:00:00.72
# Mc/sec: 396.06
//
Query:       MMETSP1325-20131115|10894_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-05   23.5   0.8    5.6e-05   23.0   0.0    1.6  2  PF03457.9 Helicase associated domain


Domain annotation for each model (and alignments):
>> PF03457.9  Helicase associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   4.1e-09   5.6e-05       1      40 [.       5      45 ..       5      51 .. 0.95
   2 ?   -2.3   0.1      0.33   4.5e+03       6      18 ..      86      98 ..      82      99 .] 0.70

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 4.1e-09
    PF03457.9  1 wspaddaWeeglaaLrafaaehGhlnvPrdatee.gfkLGq 40
                 w ++d++We+   +Lr+f   +Gh++v rd++++ g+kLG+
  MMETSP1325-20131115|10894_1  5 WAKEDERWERFVVELRRFELFEGHCRVERDYVTPsGYKLGA 45
                 8899*****************************9******7 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.33
    PF03457.9  6 daWeeglaaLraf 18
                  +W++ ++a  af
  MMETSP1325-20131115|10894_1 86 TKWQKFMDAFSAF 98
                 6788877777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|10896_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        86  (0.00629023); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.35s 00:00:00.63 Elapsed: 00:00:00.49
# Mc/sec: 278.76
//
Query:       MMETSP1325-20131115|10897_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.7   0.2        1.9    7.8   0.0    2.0  2  PF10911.3 Protein of unknown function (DUF2717)


Domain annotation for each model (and alignments):
>> PF10911.3  Protein of unknown function (DUF2717)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1    0.0075     1e+02      47      57 ..      12      22 ..       7      31 .. 0.82
   2 ?    7.8   0.0   0.00014       1.9      10      39 ..      36      64 ..      28      68 .. 0.81

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.0075
    PF10911.3 47 aGysesyiaGf 57
                  G s +yi+Gf
  MMETSP1325-20131115|10897_1 12 GGESSAYIVGF 22
                 58899*****9 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.00014
    PF10911.3 10 knPdDiPdvpraaaeYLqvrfnasYliasG 39
                 + P D P v++a +e L+ r+  sY+ +  
  MMETSP1325-20131115|10897_1 36 RMPRDSPFVAKALKE-LAARLVRSYVSHMA 64
                 67************9.899******98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 344.48
//
Query:       MMETSP1325-20131115|10895_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-09   36.5  26.1    1.2e-06   28.0   2.1    3.3  3  PF00397.21 WW domain
  ------ inclusion threshold ------
      0.021   15.1   2.3      0.036   14.3   1.6    1.4  1  PF07813.7  LTXXQ motif family protein


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   2.1   1.8e-10   1.2e-06       4      31 .]     116     143 ..     114     143 .. 0.87
   2 !   11.9   5.3     2e-05      0.14       4      31 .]     178     206 ..     176     206 .. 0.88
   3 !    7.4   0.6   0.00051       3.5       4      21 ..     218     235 ..     215     236 .. 0.82

  Alignments for each domain:
  == domain 1    score: 28.0 bits;  conditional E-value: 1.8e-10
                  SEEE.E.E-.---EEEEETTT--EESS-- CS
   PF00397.21   4 gWeersddd.dGrvYYyNheTgetqWekP 31 
                  +W++++d + ++ +YY+N +T+et+W  P
  MMETSP1325-20131115|10895_1 116 DWVQVYD-EaSQAYYYFNSKTQETSWSAP 143
                  6**9995.679***************766 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 2e-05
                  S.EEE.E.E-.---EEEEETTT--EESS-- CS
   PF00397.21   4 g.Weersddd.dGrvYYyNheTgetqWekP 31 
                  g W e +d + ++ +Y+yN  T e +W++P
  MMETSP1325-20131115|10895_1 178 GeWSEQYD-EnAQATYWYNSVTYEATWTPP 206
                  55*99996.559*****************9 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.00051
                  S.EEE.E.E----EEEEET CS
   PF00397.21   4 g.WeersddddGrvYYyNh 21 
                  g W  + d+d G  Y+yN 
  MMETSP1325-20131115|10895_1 218 GeWASYMDPD-GTEYWYND 235
                  5599888888.*******5 PP

>> PF07813.7  LTXXQ motif family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.6   5.3e-06     0.036       6      49 ..      46      89 ..      29     115 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 5.3e-06
    PF07813.7  6 iaklkaeLkLtdaQkaalkalaeaaraearelkakkeemramrk 49
                 +a l ++LkL d+Qk +l +l++++ a+++e  +k+++ +++++
  MMETSP1325-20131115|10895_1 46 HALLDDKLKLFDDQKNQLLDLQKSLDAKMKEFDEKQKTFEEAKD 89
                 5667799*************************555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       869  (0.0635606); expected 273.4 (0.02)
Passed bias filter:                      525  (0.0383996); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.44s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 1082.80
//
Query:       MMETSP1325-20131115|10890_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          2    7.5   4.5        1.2    8.2   1.9    1.5  1  PF07701.9 Heme NO binding associated


Domain annotation for each model (and alignments):
>> PF07701.9  Heme NO binding associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.9   8.6e-05       1.2     168     212 ..     104     147 ..      98     155 .. 0.92

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 8.6e-05
    PF07701.9 168 ageqqsaelelaleleeqkkaeLeealkkldeekkktdeLLysml 212
                  +  qq+ e +l++ +e qk+a L++   k+ ++k  +d+ L  +l
  MMETSP1325-20131115|10890_1 104 MERQQRTERQLTQARE-QKEAALQRRAMKAYKNKASSDDALGDIL 147
                  6789************.*********************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1138  (0.0832358); expected 273.4 (0.02)
Passed bias filter:                      572  (0.0418373); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.39s 00:00:00.99 Elapsed: 00:00:00.49
# Mc/sec: 1051.46
//
Query:       MMETSP1325-20131115|10903_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.46s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 1281.13
//
Query:       MMETSP1325-20131115|10904_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 352.67
//
Query:       MMETSP1325-20131115|10902_1  [L=181]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       410  (0.0299883); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 942.91
//
Query:       MMETSP1325-20131115|10901_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.40s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1231.73
//
Query:       MMETSP1325-20131115|10906_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.075   12.7   1.6        2.5    7.8   0.2    2.2  2  PF08085.6  Entericidin EcnA/B family
        0.1   12.1   0.0       0.11   12.0   0.0    1.1  1  PF03120.11 NAD-dependent DNA ligase OB-fold domain


Domain annotation for each model (and alignments):
>> PF08085.6  Entericidin EcnA/B family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.2   0.00036       2.5      12      21 .]      17      26 ..      16      26 .. 0.94
   2 ?    4.3   0.0    0.0049        33      10      19 ..      45      54 ..      45      55 .] 0.87

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00036
    PF08085.6 12 sAGeAieraA 21
                 +AGe +eraA
  MMETSP1325-20131115|10906_1 17 QAGESVERAA 26
                 7********9 PP

  == domain 2    score: 4.3 bits;  conditional E-value: 0.0049
    PF08085.6 10 iqsAGeAier 19
                 + +AGe +er
  MMETSP1325-20131115|10906_1 45 VRQAGESVER 54
                 569*****98 PP

>> PF03120.11  NAD-dependent DNA ligase OB-fold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.6e-05      0.11      30      64 ..      18      51 ..       9      54 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.6e-05
                 ---EEEEEE--SHHHHHH----B--EEEEEEE--- CS
   PF03120.11 30 agttVsratLhnedeikekdirigdtvvvskaGdv 64
                 ag  V+ra L  +d +++ +i+ +  v v++aG+ 
  MMETSP1325-20131115|10906_1 18 AGESVERAALDRADVVAR-QIKANKLVKVRQAGES 51
                 799*******99998875.7*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 253.46
//
Query:       MMETSP1325-20131115|10899_1  [L=639]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-08   34.7   9.8     0.0011   18.6   5.5    2.4  2  PF01485.16 IBR domain
  ------ inclusion threshold ------
       0.12   12.0   0.5        2.7    7.6   0.0    2.3  2  PF09063.5  Phage PP7 coat protein


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.7e-06     0.012       2      29 ..     139     166 ..     138     174 .. 0.91
   2 !   18.6   5.5   1.6e-07    0.0011      18      58 ..     219     262 ..     205     271 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.7e-06
   PF01485.16   2 kyeklklkkylesekelkwCprpdCeai 29 
                  ky ++++++ le ++++ wCp++dC+a+
  MMETSP1325-20131115|10899_1 139 KYRRFRRNTLLEDQPDVVWCPAADCGAP 166
                  899**999999**************987 PP

  == domain 2    score: 18.6 bits;  conditional E-value: 1.6e-07
   PF01485.16  18 lkwCprpdCeaiiekekgakks....svtCskCgfefCflCkkew 58 
                  ++ C +++C+++ ++ +  +k     ++tC  Cg+++C+ C++++
  MMETSP1325-20131115|10899_1 219 TNSCKENGCSRAHRAGGXVEKLdacpHMTCL-CGHQWCWVCRQAY 262
                  358999999988887777776677778****.**********986 PP

>> PF09063.5  Phage PP7 coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0004       2.7      54      87 ..     145     178 ..     122     195 .. 0.75
   2 ?    2.1   0.0     0.021   1.4e+02      35      74 ..     213     252 ..     200     261 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0004
                  EEEEEEEEEEEEEXXXXXX---EEEEEEEEEEEE CS
    PF09063.5  54 rvnlkldqadvvdcstsvcgelpkvrytqvwshd 87 
                  r  l  dq dvv c ++ cg   +    +vws  
  MMETSP1325-20131115|10899_1 145 RNTLLEDQPDVVWCPAADCGAPKRRVLHNVWSWG 178
                  3346669*************75555567899975 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.021
                  ----EEEEEEEE---TSEEEEEEEEEEEEEEEXXXXXX-- CS
    PF09063.5  35 vgrlrltaslrqngaktayrvnlkldqadvvdcstsvcge 74 
                  v  + +t s ++ng+  a+r    +++ d     t +cg 
  MMETSP1325-20131115|10899_1 213 VINVSFTNSCKENGCSRAHRAGGXVEKLDACPHMTCLCGH 252
                  5667899**********************99999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       833  (0.0609274); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.10u 0.35s 00:00:01.45 Elapsed: 00:00:00.54
# Mc/sec: 2835.69
//
Query:       MMETSP1325-20131115|10908_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 562.41
//
Query:       MMETSP1325-20131115|10909_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   12.5   0.4       0.17   12.1   0.3    1.2  1  PF11024.3 Dispersed gene family protein 1 of Trypanosoma cruzi region 4


Domain annotation for each model (and alignments):
>> PF11024.3  Dispersed gene family protein 1 of Trypanosoma cruzi region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   1.2e-05      0.17      14      70 ..      24      82 ..      19      86 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.2e-05
    PF11024.3 14 shtatLTetRsltptwtPsl..stthysptqysetetlqvtetvalspTrtptasvsst 70
                 s+ a   ++  ltp++ Ps     +hys    +++    vt + al   +t +  vs++
  MMETSP1325-20131115|10909_1 24 SRSASAAAAEELTPSSNPSEnvEQQHYSAEPGESSRNPHVTAEEALAAANTVALPVSGS 82
                 566777788889******98667899*****9*******************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 524.20
//
Query:       MMETSP1325-20131115|10910_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 215.67
//
Query:       MMETSP1325-20131115|10912_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 328.39
//
Query:       MMETSP1325-20131115|10913_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.45
# Mc/sec: 436.67
//
Query:       MMETSP1325-20131115|10915_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 339.48
//
Query:       MMETSP1325-20131115|10914_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-12   47.6   0.0    2.2e-12   47.2   0.0    1.2  1  PF00300.17 Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
      0.026   13.7   0.1       0.05   12.8   0.1    1.4  1  PF00328.17 Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> PF00300.17  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2   0.0   3.2e-16   2.2e-12       2      88 ..      29     129 ..      28     149 .. 0.79

  Alignments for each domain:
  == domain 1    score: 47.2 bits;  conditional E-value: 3.2e-16
                  EEEEE---BH...CCCTTBGGGTCC.......--B-----HHHHHHHTHHHH.....TTHCESEEEEESSHHHHHHHHHHCCCCE.EEEEE.GGGSHHHH--- CS
   PF00300.17   2 lylvRHGese...lnkegrlqgwsd.......vpLtekGreqarelgkkLkr.....adlqidavytSplkRaiqTaeilleeld.ipiiqeprLrerdfgew 88 
                  +++ RHGe+e   +  ++r + w++       +pLt+ G++q  +lg+++kr       +++++v++Spl R++qTa+  + el+   + +e +L+e + ++w
  MMETSP1325-20131115|10914_1  29 VFVSRHGEREdyqW--KKRGENWIQqaerpwdTPLTDAGHRQGAALGRAIKRqveelGLPPVTRVVSSPLIRCVQTAAEAARELGvHGVGIERGLFETMGEDW 129
                  7899****987665..444444444444567449***************9999999888999**************999888787533446677777766655 PP

>> PF00328.17  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   7.3e-06      0.05       3     110 ..      26     104 ..      24     111 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 7.3e-06
                  EEEEEEEE---B--SHHHCCHCCHHHHHHHH.H-S-----GGGGGT-.....GS-----S.B-----HHHHH---HHHHHTCCCCTTS..TTTEEEEEESSHHHHHHHH CS
   PF00328.17   3 kgvvvviRHGdRtPkqkfkksvtsekfisllklknvlekkghfpgtkrkeklqlilkwgg.lThsGrkqaeelGeqlrqrYpgllrdhltyedvkirssserRvlaSAq 110
                  ++ v v+RHG+R   q +k                    + ++ +       q + +w+  lT +G +q  +lG+ ++++  +l  +        + ss   R++++A+
  MMETSP1325-20131115|10914_1  26 EMAVFVSRHGEREDYQWKK-------------------RGENWIQ-------QAERPWDTpLTDAGHRQGAALGRAIKRQVEELGLP----PVTRVVSSPLIRCVQTAA 104
                  78999******99977666...................6888995.......99***********************9988855444....357888999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.55
# Mc/sec: 814.76
//
Query:       MMETSP1325-20131115|10917_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-05   24.9   0.0    1.5e-05   24.9   0.0    1.0  1  PF12697.2  Alpha/beta hydrolase family
     0.0018   17.9   0.0     0.0018   17.9   0.0    1.0  1  PF12695.2  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.012   15.1   0.0      0.013   14.9   0.0    1.0  1  PF00561.15 alpha/beta hydrolase fold
       0.06   12.7   0.0       0.06   12.7   0.0    1.1  1  PF01764.20 Lipase (class 3)
      0.071   11.8   0.0      0.072   11.8   0.0    1.0  1  PF09752.4  Uncharacterized conserved protein (DUF2048)
      0.076   12.8   0.0      0.076   12.8   0.0    1.1  1  PF01734.17 Patatin-like phospholipase
      0.086   12.1   0.0      0.086   12.1   0.0    1.0  1  PF00756.15 Putative esterase
      0.091   12.2   0.0      0.091   12.2   0.0    1.0  1  PF06821.8  Serine hydrolase
        0.1   12.0   0.1        0.1   12.0   0.0    1.1  1  PF07819.8  PGAP1-like protein


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   9.8e-09   1.5e-05      70     102 ..      10      43 ..       5      50 .. 0.91

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 9.8e-09
                  EE--------HHHHHH----..EEEEEEE----- CS
    PF12697.2  70 lvGHSlGgavalaaaarrpd.lvrglvlidppgp 102
                   vGHS Gg+v+++aa+r p+ ++r++ li+p+++
  MMETSP1325-20131115|10917_1  10 MVGHSTGGIVSILAAHRMPKlNIRRICLISPAIW 43 
                  69***************9999***********95 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.2e-06    0.0018      59      91 ..       7      41 ..       1      50 [. 0.80

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.2e-06
    PF12695.2 59 riilvGhSlGGgvalelagrd..drvkglvllapf 91
                  +++vGhS GG v++++a r    +++ ++l++p 
  MMETSP1325-20131115|10917_1  7 LWGMVGHSTGGIVSILAAHRMpkLNIRRICLISPA 41
                 5899**************98655689999999983 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   8.4e-06     0.013      46      78 ..       8      41 ..       3      47 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 8.4e-06
                 EEEEE-B---HHHHHHHHHCGG.GEEEEEEESB- CS
   PF00561.15 46 ltlvGhSmGGmialayaaeypd.rvkamvllgtv 78
                 + +vGhS GG  +  +a + p+ +++++ l++++
  MMETSP1325-20131115|10917_1  8 WGMVGHSTGGIVSILAAHRMPKlNIRRICLISPA 41
                 568****************************994 PP

>> PF01764.20  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     4e-05      0.06      68      89 ..      10      31 ..       6      47 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4e-05
                 EE-------HHHHHHHHHHHT- CS
   PF01764.20 68 vtGHSLGGalAlLaaadlaeng 89
                 ++GHS GG +++Laa  + + +
  MMETSP1325-20131115|10917_1 10 MVGHSTGGIVSILAAHRMPKLN 31
                 58*************9887655 PP

>> PF09752.4  Uncharacterized conserved protein (DUF2048)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.8e-05     0.072     172     209 ..       3      41 ..       1      47 [. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.8e-05
    PF09752.4 172 eGygplgvtGlSmGGhmaslaasnlpk.plalvpllsws 209
                  eG    g+ G S GG ++ laa  +pk ++  ++l+s++
  MMETSP1325-20131115|10917_1   3 EGEELWGMVGHSTGGIVSILAAHRMPKlNIRRICLISPA 41 
                  5666789*******************8789999999975 PP

>> PF01734.17  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     5e-05     0.076      30      57 ..       9      36 ..       1      47 [. 0.86

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 5e-05
   PF01734.17 30 iisGtSaGaiiaallalgrdpaalvedl 57
                  ++G S+G+i+++l a+ ++  +++  +
  MMETSP1325-20131115|10917_1  9 GMVGHSTGGIVSILAAHRMPKLNIRRIC 36
                 58999*************9999998776 PP

>> PF00756.15  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   5.7e-05     0.086     119     139 ..      10      30 ..       3      48 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.7e-05
                  EE--THHHHHHHHHHHH-TTT CS
   PF00756.15 119 vaGqSmGGlgALilalkhpdr 139
                   +G+S GG +++++a + p++
  MMETSP1325-20131115|10917_1  10 MVGHSTGGIVSILAAHRMPKL 30 
                  69*****************97 PP

>> PF06821.8  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     6e-05     0.091      56      92 ..       7      43 ..       1      50 [. 0.83

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6e-05
                 TEEEEEE----HHHHHHHH---SS-E--EEEE----. CS
    PF06821.8 56 kvvlvAHSlgclavlhaaelqsrakvagalLVApadv 92
                  + +v HS g ++++ aa++  + +++++ L++pa  
  MMETSP1325-20131115|10917_1  7 LWGMVGHSTGGIVSILAAHRMPKLNIRRICLISPAIW 43
                 5678************99888888**********965 PP

>> PF07819.8  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.7e-05       0.1      89     104 ..      10      25 ..       7      46 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 6.7e-05
    PF07819.8  89 liGHSmGGlVArsalt 104
                  ++GHS GG+V+ +a+ 
  MMETSP1325-20131115|10917_1  10 MVGHSTGGIVSILAAH 25 
                  69********987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|10919_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1    9.6  14.6       0.15   12.3   0.7    2.6  3  PF11740.3 Plasmid replication region DNA-binding N-term


Domain annotation for each model (and alignments):
>> PF11740.3  Plasmid replication region DNA-binding N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.8   0.00045       6.2      43     102 ..       7      66 ..       5      72 .. 0.78
   2 ?   12.3   0.7   1.1e-05      0.15      47      94 ..      75     123 ..      66     127 .. 0.84
   3 ?   -2.4   0.5       0.4   5.5e+03      88     101 ..     145     158 ..     140     159 .] 0.51

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00045
    PF11740.3  43 ewreeqraaaesaapelPealsealaelvaalwqaaqeeaeerlaaaraeaeaeraalea 102
                  +wr +++a+ + +  ++P+++++ +++l  +l  a+q     ++a++ +ea++ +a+  a
  MMETSP1325-20131115|10919_1   7 KWRVSEDANNAVVSHAVPAEIADLVQDLRSELKMAVQGRDFSAVATLLDEADRVEADCGA 66 
                  588888888877888899999888888888888888888888888888888887776655 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 1.1e-05
    PF11740.3  47 eqraaa.esaapelPealsealaelvaalwqaaqeeaeerlaaaraeae 94 
                  e+ aa+  ++++ lP a s a+ +  +++ q+a ++a + + +++++++
  MMETSP1325-20131115|10919_1  75 ELSAAVsLQSHEGLPGAMSNAVHATSGQAIQQASDAAGDHMVTEEQAHD 123
                  5555555567899*****************************9999986 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 0.4
    PF11740.3  88 aaraeaeaeraale 101
                  a+r++++++raa+e
  MMETSP1325-20131115|10919_1 145 AHRRKMKQKRAAQE 158
                  44445555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 747.10
//
Query:       MMETSP1325-20131115|10916_1  [L=333]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 1628.54
//
Query:       MMETSP1325-20131115|10920_1  [L=374]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-25   88.1   7.3    1.9e-06   27.4   0.0    5.5  5  PF00400.27 WD domain, G-beta repeat
    2.2e-05   23.7   0.0       0.18   11.3   0.0    3.3  3  PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.055   12.1   0.0       0.23   10.0   0.0    1.8  2  PF04053.9  Coatomer WD associated region
        0.5   10.3   2.5         31    4.6   0.1    3.5  3  PF01436.16 NHL repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   5.6e-10   1.9e-06      14      39 .]      89     114 ..      86     114 .. 0.93
   2 !    6.7   0.0    0.0019       6.4      12      29 ..     128     145 ..     124     153 .. 0.89
   3 !   19.1   0.1   2.2e-07   0.00075      11      37 ..     178     204 ..     171     205 .. 0.92
   4 !   19.7   1.7   1.4e-07   0.00049       5      39 .]     214     248 ..     211     248 .. 0.96
   5 !   12.3   0.0   3.2e-05      0.11       5      36 ..     336     368 ..     334     371 .. 0.90

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 5.6e-10
                  EEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27  14 VtcvafspdgpllasgSrDgtirlWd 39 
                  + ++a++p+++++a+g++Dg +r+Wd
  MMETSP1325-20131115|10920_1  89 IAALACHPTMQHFATGGDDGRVRIWD 114
                  6689*********************9 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0019
                  SSEEEEEEESSSTEEEEE CS
   PF00400.27  12 spVtcvafspdgpllasg 29 
                  + V+++a+sp+g +la g
  MMETSP1325-20131115|10920_1 128 GRVRALAYSPNGEILAVG 145
                  78**************98 PP

  == domain 3    score: 19.1 bits;  conditional E-value: 2.2e-07
                  SSSEEEEEEESSSTEEEEEETTSEEEE CS
   PF00400.27  11 tspVtcvafspdgpllasgSrDgtirl 37 
                  ++++ +va+sp+g ++a gS D++i++
  MMETSP1325-20131115|10920_1 178 SDWIHAVAYSPNGDFVAVGSNDHNIYI 204
                  689**********************87 PP

  == domain 4    score: 19.7 bits;  conditional E-value: 1.4e-07
                  EEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27   5 atlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                  a+l+gH + Vt +++s d++++ s + D+ ++ Wd
  MMETSP1325-20131115|10920_1 214 AILKGHRNHVTHLDWSVDSSFIQSNCGDHDLKFWD 248
                  79********************************9 PP

  == domain 5    score: 12.3 bits;  conditional E-value: 3.2e-05
                  EEEESSSSSEEEEEEESSSTEEEEEE.TTSEEE CS
   PF00400.27   5 atlrgHtspVtcvafspdgpllasgS.rDgtir 36 
                  ++++gH++++t + f   ++++++ + +D+ti 
  MMETSP1325-20131115|10920_1 336 REYHGHSGAITQIMFTAGSRFVITVGgSDRTIM 368
                  5789**************999999999****97 PP

>> PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.12     4e+02      14      37 ..      89     112 ..      79     113 .. 0.83
   2 !   11.3   0.0   5.1e-05      0.18      13      38 ..     129     154 ..     119     158 .. 0.93
   3 !    7.3   0.0   0.00086       2.9      14      37 ..     181     204 ..     167     205 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.12
    PF12894.2  14 vkfiswcPtmDLiAlatekgelal 37 
                  + ++++ Ptm  +A++ ++g + +
  MMETSP1325-20131115|10920_1  89 IAALACHPTMQHFATGGDDGRVRI 112
                  556777899*99********9876 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 5.1e-05
    PF12894.2  13 rvkfiswcPtmDLiAlatekgelaly 38 
                  rv +++++P  +++A++  +gel+++
  MMETSP1325-20131115|10920_1 129 RVRALAYSPNGEILAVGLHSGELVVC 154
                  7899*******************997 PP

  == domain 3    score: 7.3 bits;  conditional E-value: 0.00086
    PF12894.2  14 vkfiswcPtmDLiAlatekgelal 37 
                  + +++++P  D  A++++++ +++
  MMETSP1325-20131115|10920_1 181 IHAVAYSPNGDFVAVGSNDHNIYI 204
                  7799****************9987 PP

>> PF04053.9  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.13   4.5e+02      34      58 ..     129     154 ..     125     166 .. 0.78
   2 ?   10.0   0.0   6.9e-05      0.23      26      63 ..     172     210 ..     161     238 .. 0.71

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 0.13
    PF04053.9  34 ypqslshnpngrfvlV.cgdgeyiiy 58 
                   +++l+++png++++V   +ge  ++
  MMETSP1325-20131115|10920_1 129 RVRALAYSPNGEILAVgLHSGELVVC 154
                  5789************7677766655 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 6.9e-05
    PF04053.9  26 kelgsieiypqslshnpngrfvlV..cgdgeyiiytalaw 63 
                   +++ ++ ++++++++png fv+V  ++++ yi+ t  a 
  MMETSP1325-20131115|10920_1 172 TSVQVSSDWIHAVAYSPNGDFVAVgsNDHNIYILNT-TAY 210
                  45556666799*************855555555554.333 PP

>> PF01436.16  NHL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1    0.0089        31       7      20 ..     142     156 ..     140     158 .. 0.90
   2 ?    1.8   0.1     0.068   2.3e+02       5      16 ..     182     193 ..     179     202 .. 0.73
   3 ?    2.5   0.1     0.041   1.4e+02       7      19 ..     193     206 ..     191     211 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0089
                  EEE-.TT--EEEEEG CS
   PF01436.16   7 vavd.sdGdvyVaDs 20 
                  +av   +G+++V+D+
  MMETSP1325-20131115|10920_1 142 LAVGlHSGELVVCDV 156
                  79999*********6 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.068
                  EEEEE-TT--EE CS
   PF01436.16   5 hGvavdsdGdvy 16 
                  h va++++Gd++
  MMETSP1325-20131115|10920_1 182 HAVAYSPNGDFV 193
                  889***777775 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.041
                  EEE-.TT--EEEEE CS
   PF01436.16   7 vavd.sdGdvyVaD 19 
                  vav  +d+++y+ +
  MMETSP1325-20131115|10920_1 193 VAVGsNDHNIYILN 206
                  9**********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.33s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 1906.89
//
Query:       MMETSP1325-20131115|10918_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1305.77
//
Query:       MMETSP1325-20131115|10922_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|10923_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-14   53.4   0.0    1.9e-14   53.3   0.0    1.0  1  PF02450.10 Lecithin:cholesterol acyltransferase


Domain annotation for each model (and alignments):
>> PF02450.10  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   1.4e-18   1.9e-14      13      95 ..       3      87 .]       1      87 [] 0.95

  Alignments for each domain:
  == domain 1    score: 53.3 bits;  conditional E-value: 1.4e-18
   PF02450.10 13 krlvdcwikllemvldksvqlveldpgvkirppgfgaaqsveklDksviagyl..iwkklvknlvkiGyeknktvsaaPYDWRls 95
                 + +v+cw+++ ++v+d+   + +++ gv ir+p+ g ++++e+l ++ + +    ++++  + l+  G++++  +++aPYD R++
  MMETSP1325-20131115|10923_1  3 PGAVECWCDNIQLVYDEEQDVFSNQDGVSIRVPDWGGTSAFESLSPKALLKSAthYFSTFNDALEDAGFKRGTSIRGAPYDFRYA 87
                 6789*****************************************9999888878999999**********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 386.08
//
Query:       MMETSP1325-20131115|10925_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-13   47.6   0.0    1.2e-12   47.4   0.0    1.1  1  PF00378.15 Enoyl-CoA hydratase/isomerase family


Domain annotation for each model (and alignments):
>> PF00378.15  Enoyl-CoA hydratase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.0   8.5e-17   1.2e-12     163     245 .]       2      83 ..       1      83 [. 0.98

  Alignments for each domain:
  == domain 1    score: 47.4 bits;  conditional E-value: 8.5e-17
                  HHHHHHTTSSSEEE-GCC---HHHHHHHHHH--S--SS-HHHHHHH..HHHH------------HCHHHHHHHHHHCCG---H CS
   PF00378.15 163 adeAlkvGlvdkvvpeeelveeaielakrladkpklalallkkamraalekalsevrkqelklypallakedvkegvqaflek 245
                  a+eAl++Glv++vvp  +l+ e++++++r+++++++a+a lk+a++a  e+  + ++  +++++  ++ +++ keg +aflek
  MMETSP1325-20131115|10925_1   2 AAEALQMGLVNAVVPLGDLETETVRWCRRILENSPTAIACLKAALNA-DEDGQAGIQTLAGHATRLFYLSDEGKEGRDAFLEK 83 
                  99********************************************7.9*******************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 606.74
//
Query:       MMETSP1325-20131115|10927_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 623.96
//
Query:       MMETSP1325-20131115|10926_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.33s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1293.03
//
Query:       MMETSP1325-20131115|10931_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 729.56
//
Query:       MMETSP1325-20131115|10933_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.31s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 896.24
//
Query:       MMETSP1325-20131115|10935_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.6   1.5       0.17   11.5   0.8    1.3  1  PF12938.2 M domain of GW182
       0.38   10.3   5.8       0.62    9.6   3.8    1.5  1  PF13229.1 Right handed beta helix region


Domain annotation for each model (and alignments):
>> PF12938.2  M domain of GW182
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.8   2.4e-05      0.17      43      78 ..       8      57 ..       3      91 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.4e-05
    PF12938.2 43 gggggaaggnpnlaslsslsskslgkylsgqqapp..............l 78
                 + +gga++ n++++s+++ +++ l +y++++++                +
  MMETSP1325-20131115|10935_1  8 SLTGGAMDVNSASSSVHVSTTHFLHNYADQNGGAIsgsataivtvtdslM 57
                 567999***********************777755454444444433322 PP

>> PF13229.1  Right handed beta helix region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.8     9e-05      0.62      74     156 ..      24     109 ..       2     111 .. 0.70

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 9e-05
    PF13229.1  74 gssnntienntitnnggaGiylnynssnntitnNtisnng..gsGiyvegsssgnititnntisnng....gaGiylinsssgitvsnN 156
                    s++++ +n    ngg  i+ +  ++ +t+t++ + nn+   sG   ++++ +++t+ n ++s ++    g+G++l + +s  ++sn 
  MMETSP1325-20131115|10935_1  24 HVSTTHFLHNYADQNGG-AISGSA-TAIVTVTDSLMANNAagESGGSAYATA-TWLTFDNVSVSESRaglkGGGVALTGDTSTGRFSNT 109
                  23344455555555555.783334.777999****99999886666666666.8**99****999888999999999999998888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 545.84
//
Query:       MMETSP1325-20131115|10938_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.25   10.5   1.2          6    6.0   0.1    2.1  2  PF08990.6 Erythronolide synthase docking


Domain annotation for each model (and alignments):
>> PF08990.6  Erythronolide synthase docking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1    0.0025        35      21      26 ..       9      14 ..       8      15 .. 0.91
   2 ?    6.0   0.1   0.00044         6       3      12 ..      38      47 ..      37      47 .. 0.96

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.0025
    PF08990.6 21 tRqRLr 26
                 tRqRL+
  MMETSP1325-20131115|10938_1  9 TRQRLH 14
                 9****7 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.00044
    PF08990.6  3 nEeKLrdYLK 12
                 +Ee+L ++LK
  MMETSP1325-20131115|10938_1 38 DEEQLFEFLK 47
                 8********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 221.20
//
Query:       MMETSP1325-20131115|10939_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 352.92
//
Query:       MMETSP1325-20131115|10940_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.32s 00:00:00.64 Elapsed: 00:00:00.44
# Mc/sec: 392.13
//
Query:       MMETSP1325-20131115|10941_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-05   24.9   0.0      3e-05   24.3   0.0    1.3  1  PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold


Domain annotation for each model (and alignments):
>> PF01408.17  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   2.2e-09     3e-05      80     115 ..       2      37 ..       1      43 [. 0.92

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 2.2e-09
                  HHHHHTT-EEEEESSS-SSHHHHHHHHHHHHHHT-- CS
   PF01408.17  80 laaleagkhvllEKPlattveeakelvelaekkgki 115
                  ++a++agkhv lEKP+   v+e+++l++ a+ +g++
  MMETSP1325-20131115|10941_1   2 QKAIAAGKHVYLEKPMGGEVAELDALIQSAANAGVQ 37 
                  689****************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 363.89
//
Query:       MMETSP1325-20131115|10932_1  [L=562]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-11   43.9   9.3      0.015   15.0   0.0    7.3  7  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.025   14.5   0.1      0.049   13.5   0.0    1.4  1  PF13694.1  Sec63/Sec62 complex-interacting family


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.059     4e+02       8      33 ..      12      39 ..       7      40 .. 0.78
   2 ?    1.2   0.0     0.049   3.4e+02      24      39 .]     141     156 ..     114     156 .. 0.78
   3 !   15.0   0.0   2.2e-06     0.015      18      39 .]     246     277 ..     237     277 .. 0.76
   4 !    6.0   0.0    0.0016        11      11      39 .]     356     389 ..     356     389 .. 0.94
   5 !    4.5   0.0    0.0045        31       6      26 ..     407     427 ..     403     432 .. 0.87
   6 ?    2.7   0.0     0.017   1.1e+02      14      31 ..     487     504 ..     481     512 .. 0.83
   7 !   11.0   0.3   4.2e-05      0.28       8      39 .]     525     558 ..     521     558 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.059
                 ESSSSSEEEEEEESS..STEEEEEETTS CS
   PF00400.27  8 rgHtspVtcvafspd..gpllasgSrDg 33
                 rg +s V+ v +  +     ++sg++D+
  MMETSP1325-20131115|10932_1 12 RGGKSKVSFVHWLAHgsEFKFVSGGEDH 39
                 677777888888877888999****997 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.049
                  TEEEEEETTSEEEEEE CS
   PF00400.27  24 pllasgSrDgtirlWd 39 
                  ++l+ g  +gt++++d
  MMETSP1325-20131115|10932_1 141 SRLVAGNTNGTVKVFD 156
                  678999999*****98 PP

  == domain 3    score: 15.0 bits;  conditional E-value: 2.2e-06
                  EEESS..........STEEEEEETTSEEEEEE CS
   PF00400.27  18 afspd..........gpllasgSrDgtirlWd 39 
                  af p             l+a+ ++Dgt+r+W+
  MMETSP1325-20131115|10932_1 246 AFPPQlsdksvedpfKDLFATTGDDGTLRIWN 277
                  555555555666666899*************7 PP

  == domain 4    score: 6.0 bits;  conditional E-value: 0.0016
                  SSSEEEEEEESS.....STEEEEEETTSEEEEEE CS
   PF00400.27  11 tspVtcvafspd.....gpllasgSrDgtirlWd 39 
                  t++V++++f ++     + +la +S+D+++ +++
  MMETSP1325-20131115|10932_1 356 TGWVSDLKFFDSpvddeMFRLALASHDNSVLIYS 389
                  799***************************9985 PP

  == domain 5    score: 4.5 bits;  conditional E-value: 0.0045
                  EEESSSSSEEEEEEESSSTEE CS
   PF00400.27   6 tlrgHtspVtcvafspdgpll 26 
                  +++ H+++Vt ++f+  g++l
  MMETSP1325-20131115|10932_1 407 IITKHNAAVTHIDFNEYGNYL 427
                  5678***********999998 PP

  == domain 6    score: 2.7 bits;  conditional E-value: 0.017
                  EEEEEEESSSTEEEEEET CS
   PF00400.27  14 VtcvafspdgpllasgSr 31 
                  ++++  sp+ ++la+g +
  MMETSP1325-20131115|10932_1 487 INACHRSPSKRFLATGDS 504
                  899999*********975 PP

  == domain 7    score: 11.0 bits;  conditional E-value: 4.2e-05
                  ESSSSSEEEEEEESS.STEEEEEE.TTSEEEEEE CS
   PF00400.27   8 rgHtspVtcvafspd.gpllasgS.rDgtirlWd 39 
                  +gH+s V  v+f+ d   +l++++ +D+++  W+
  MMETSP1325-20131115|10932_1 525 SGHSSHVMNVRFASDtDEVLVTCGgKDRCVMRWS 558
                  7***************999999999999998885 PP

>> PF13694.1  Sec63/Sec62 complex-interacting family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   7.1e-06     0.049     140     184 ..     399     445 ..     385     450 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 7.1e-06
    PF13694.1 140 s.viksgvistpshiapvssidsd..sadseqldSlqsllyhDLeqss 184
                  s   k++vi +  h a v++id +  +++ + +d +q+llyhDL +++
  MMETSP1325-20131115|10932_1 399 SpQDKKNVI-ITKHNAAVTHIDFNeyGNYLQSTDAEQNLLYHDLSGDK 445
                  423444444.4445555666665412577888889*********9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.38s 00:00:01.26 Elapsed: 00:00:00.55
# Mc/sec: 2448.64
//
Query:       MMETSP1325-20131115|10937_1  [L=765]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-06   25.9   0.0    1.2e-05   24.9   0.0    1.4  1  PF02342.13 Bacterial stress protein


Domain annotation for each model (and alignments):
>> PF02342.13  Bacterial stress protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   8.8e-10   1.2e-05      16     117 ..     592     684 ..     570     693 .. 0.84

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 8.8e-10
   PF02342.13  16 lsgdnatgdGsgarlddetlvvdldrlpadvekieftvtihdagsgaqafgpvanafvrvvdrenlvelarydltedaapetalIvaelyr.eagawkfravG 117
                  +s     gd+  ++++++++ vdl++lp +++++  ++  +++    + +++ + + vr++  +   +l +++lte+     a+++  l   ++g w++r + 
  MMETSP1325-20131115|10937_1 592 HS-----GDVMSPGKGKHVVSVDLNALPESITDLFLVLSAYNC----RDLAKFPSPVVRLFATDPAHQLTKFSLTESYH-TEAVVMSALSKsQNGRWSLRDIC 684
                  33.....334444779***********************8877....8999999999*********************9.99*******99899*****9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (765 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.05u 0.36s 00:00:01.41 Elapsed: 00:00:00.62
# Mc/sec: 2956.80
//
Query:       MMETSP1325-20131115|10944_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 302.94
//
Query:       MMETSP1325-20131115|10945_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.2    8.4   7.8        1.4    8.2   5.4    1.1  1  PF04893.12 Yip1 domain
        4.2    6.0   6.8        5.1    5.7   4.7    1.1  1  PF05277.7  Protein of unknown function (DUF726)


Domain annotation for each model (and alignments):
>> PF04893.12  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   5.4   0.00021       1.4     106     162 ..       2      79 ..       1      88 [. 0.81

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00021
   PF04893.12 106 yallPlilgalialllllllgt.....................llllvgllaliWslvllylglkaahnlskkkalla 162
                  ya+++++ ++li ++l  ++++                     ++++v ++a++ ++v++++  +++h+l +     a
  MMETSP1325-20131115|10945_1   2 YAAAVWLWLWLIVAALQAAGCAnragshpighvagdaghivvgGIAVVAVAAAAAAAVIVAGVAQEVHHLGWPAGRTA 79 
                  677777777777666666666688888***************9999999999999999999999*****987655444 PP

>> PF05277.7  Protein of unknown function (DUF726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   4.7   0.00075       5.1      10      55 ..      39      88 ..      31      94 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.00075
    PF05277.7 10 glaglgGglligltgglaaPlvaagigallatv....GatgsaafLastg 55
                 g+  +gG++++++ + +aa ++ ag++  +  +    G t++a + a+ g
  MMETSP1325-20131115|10945_1 39 GHIVVGGIAVVAVAAAAAAAVIVAGVAQEVHHLgwpaGRTAAALRHAAGG 88
                 77789***********************9999955555665555545444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       809  (0.059172); expected 273.4 (0.02)
Passed bias filter:                      440  (0.0321826); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.42s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 474.38
//
Query:       MMETSP1325-20131115|10947_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.2    7.8   4.8        4.6    6.8   3.3    1.5  1  PF05647.6 C. elegans protein of unknown function (DUF801)


Domain annotation for each model (and alignments):
>> PF05647.6  C. elegans protein of unknown function (DUF801)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.3   0.00034       4.6       7      21 ..      55      69 ..      52      75 .. 0.88

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00034
    PF05647.6  7 STTaGPSSTATNSAS 21
                 S TaGP   A NSA 
  MMETSP1325-20131115|10947_1 55 SATAGPADPAANSAA 69
                 89************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       800  (0.0585138); expected 273.4 (0.02)
Passed bias filter:                      540  (0.0394968); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.44s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 667.22
//
Query:       MMETSP1325-20131115|10946_1  [L=246]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-32  110.1   0.0    5.2e-32  109.5   0.0    1.3  1  PF00085.15 Thioredoxin
    6.1e-10   39.0   0.5    2.3e-07   30.6   0.1    2.3  2  PF13848.1  Thioredoxin-like domain
      1e-07   32.0   0.1    3.5e-06   27.0   0.0    2.4  1  PF13098.1  Thioredoxin-like domain
    1.9e-05   24.6   0.1    0.00023   21.1   0.0    2.5  3  PF13905.1  Thioredoxin-like
    0.00018   21.3   0.0    0.00037   20.3   0.0    1.5  1  PF13899.1  Thioredoxin-like
     0.0006   19.3   0.0     0.0019   17.7   0.0    1.7  1  PF00578.16 AhpC/TSA family
  ------ inclusion threshold ------
      0.068   12.5   0.0       0.13   11.6   0.0    1.4  1  PF08534.5  Redoxin


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   0.0   2.7e-35   5.2e-32       2     104 .]     121     225 ..     120     225 .. 0.98

  Alignments for each domain:
  == domain 1    score: 109.5 bits;  conditional E-value: 2.7e-35
                  EEESSHHHHHHHHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-..TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEEEE---.-HHHHHHHHHHH CS
   PF00085.15   2 vlvltkenfeeevaksdklvlvefyApwCGhCkalaPeyeklaeelke..kvvlakvdvdenkdlaseygvegiPtlklfkngkkveevegarekeklvaflkke 104
                  v+v+t e+fe+ev k+ k+vl+efyApwCGhCk+laP++++l e++k+  ++++ak+d+++n+    +++v+g+Pt+ +++n+++ +++egare +++v++l+++
  MMETSP1325-20131115|10946_1 121 VKVITGEKFEKEVIKGGKDVLLEFYAPWCGHCKSLAPKWDELGEKFKDikTIMIAKMDATANEIDHPDINVKGFPTIFFIPNEGEPSQYEGAREVDDFVKYLQTH 225
                  7899*********************************************9***************************************************9875 PP

>> PF13848.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.1   1.2e-10   2.3e-07      94     183 ..       3      96 ..       1      97 [. 0.88
   2 !    6.9   0.0    0.0023       4.4      16      74 ..     163     225 ..     118     231 .. 0.65

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 1.2e-10
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXX.XXXXXXXXXXXXXX CS
    PF13848.1  94 glppllllflnkdseeteklknriekvakkfkgkinfatvdadsfkrlleylglsssdlPvivivdsksd....kkkffp.edefsveslkeFlk 183
                  +++ ++l f++   +  +++k++++kva+  +gk+  ++v  +  +r+ ey+g ++ dlP+ vi d  sd    +kk+++ e e++ e+l +F +
  MMETSP1325-20131115|10946_1   3 PIKQHMLTFIDMKVDYIDDFKETLTKVAEVNRGKLLHIIVPST-EERVSEYFGFKDKDLPKTVIADMGSDsgagMKKYMFdEVEHTYENLIAFEN 96 
                  67778999998889999*****************999999988.79********************99986677799988466********9965 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0023
                  HHH--.--B------HHHHHH......TT---.--EEEEETTTTEEEEE-HHT--HHHHHHHHHHH CS
    PF13848.1  16 akelkgdvtfgvtsekevakk......lgike.pkvllfrkfdekrvkydgekltvddlkkfiekn 74 
                   +++k d+++ ++ + +++++       ++k  p++ +f +++ ++ +y+g+  +vdd  k ++++
  MMETSP1325-20131115|10946_1 163 GEKFK-DIKTIMIAKMDATANeidhpdINVKGfPTI-FFIPNEGEPSQYEGA-REVDDFVKYLQTH 225
                  44444.444444433333332333344666663444.455557777777776.6777777777766 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.8e-09   3.5e-06       3     112 .]     135     222 ..     133     222 .. 0.78

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 1.8e-09
    PF13098.1   3 gngkrvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpGylpaeelekll 112
                  + gk v++ f +p+C+ Ck l ++ +   ++ +++k +++ i+++  ++    ++  + d               ++v+g Pti+f+++eG++  +++G+   +++ k+l
  MMETSP1325-20131115|10946_1 135 KGGKDVLLEFYAPWCGHCKSLAPKWD---ELGEKFK-DIKTIMIAKMDAT---AN--EID------------HPDINVKGFPTIFFIPNEGEPS-QYEGAREVDDFVKYL 222
                  579******************99887...6888887.6666666555332...11..112............2479************999975.7******99999876 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.53     1e+03      15      52 ..      18      50 ..       6      72 .. 0.51
   2 !   21.1   0.0   1.2e-07   0.00023       2      42 ..     138     174 ..     136     191 .. 0.84
   3 ?   -1.1   0.0      0.98   1.9e+03      79      94 ..     189     204 ..     171     205 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.53
    PF13905.1 15 pckaftpelkelyeklkaskdkveivyVsldrdeeefk 52
                  +++f ++l+++ e ++    k+  + V+  ++ee + 
  MMETSP1325-20131115|10946_1 18 YIDDFKETLTKVAEVNR---GKLLHIIVP--STEERVS 50
                 33333333333333333...333333333..3333444 PP

  == domain 2    score: 21.1 bits;  conditional E-value: 1.2e-07
    PF13905.1   2 kivllyfaaswcppckaftpelkelyeklkaskdkveivyV 42 
                  k vll f+a+wc++ck+ +p+++el ek+k    +++ +++
  MMETSP1325-20131115|10946_1 138 KDVLLEFYAPWCGHCKSLAPKWDELGEKFK----DIKTIMI 174
                  6699*************************8....5555555 PP

  == domain 3    score: -1.1 bits;  conditional E-value: 0.98
    PF13905.1  79 ykvkaiPtlvvldkdg 94 
                   +vk++Pt++ + + g
  MMETSP1325-20131115|10946_1 189 INVKGFPTIFFIPNEG 204
                  58999***99987666 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.9e-07   0.00037      15      81 ..     135     201 ..     128     202 .. 0.71

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.9e-07
    PF13899.1  15 eegkpllvifgadwcpdCqaldrd.vlsdeevkaalaekfvllrvdvterda.nleldrqgvPvvvfld 81 
                  + gk +l+ f+a wc++C+ l+    +  e +k  ++  + + ++d t  +  + ++  +g+P+++f++
  MMETSP1325-20131115|10946_1 135 KGGKDVLLEFYAPWCGHCKSLAPKwDELGEKFKD-IK-TIMIAKMDATANEIdHPDINVKGFPTIFFIP 201
                  679******************7650444455555.44.6666777775444324466669999999975 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   9.5e-07    0.0019      15      63 ..     126     174 ..     117     186 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 9.5e-07
   PF00578.16  15 gkkvslsdlkg.kpvvLffypkdfcpvCttelpalaelyeefkkkgvevi 63 
                  g+k++ + +kg k v+L fy+  +c +C+  +p+  el e+fk+ ++ +i
  MMETSP1325-20131115|10946_1 126 GEKFEKEVIKGgKDVLLEFYAP-WCGHCKSLAPKWDELGEKFKDIKTIMI 174
                  566665556555**********.********************7665444 PP

>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   6.8e-05      0.13      28      65 ..     137     171 ..     126     185 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 6.8e-05
                  TSEEEEE---------IIIIIHHHHTHHHH.HH----E CS
    PF08534.5  28 gkkvvlvfvpgafcptCsaehpyleklaklakekgvdv 65 
                  gk v+l f++  +c+ C+  +p  ++l +++k+  ++ 
  MMETSP1325-20131115|10946_1 137 GKDVLLEFYAP-WCGHCKSLAPKWDELGEKFKD--IKT 171
                  888********.***************666554..444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.32s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 1281.53
//
Query:       MMETSP1325-20131115|10942_1  [L=1083]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-09   36.3   0.0    3.8e-06   26.5   0.0    2.4  2  PF00439.20 Bromodomain
      1e-06   28.8   0.2    3.6e-06   27.1   0.1    2.1  2  PF12796.2  Ankyrin repeats (3 copies)
    2.5e-05   23.7   0.4     0.0054   16.3   0.1    3.5  3  PF00023.25 Ankyrin repeat
    7.7e-05   22.6   0.1    0.00026   21.0   0.1    2.0  1  PF13857.1  Ankyrin repeats (many copies)
    0.00025   21.3   0.4      0.036   14.4   0.1    2.5  3  PF13637.1  Ankyrin repeats (many copies)
     0.0025   17.6   0.1       0.01   15.7   0.0    2.0  1  PF00583.19 Acetyltransferase (GNAT) family
      0.009   16.0   0.3       0.17   12.1   0.0    2.9  2  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
      0.016   14.8   0.2      0.048   13.2   0.1    1.8  1  PF08445.5  FR47-like protein
      0.083   11.3   5.8       0.14   10.6   4.0    1.2  1  PF05701.6  Plant protein of unknown function (DUF827)


Domain annotation for each model (and alignments):
>> PF00439.20  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0025       3.8      34      83 ..     858     912 ..     828     913 .. 0.81
   2 !   26.5   0.0   2.5e-09   3.8e-06       1      75 [.     967    1047 ..     967    1064 .. 0.80

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0025
   PF00439.20  34 krPidLktIqkklasgkyqslaqfekdlelvfsNavky.....neegsdvyedar 83 
                  ++Pid   I ++l+ g y+ l  f++d++ +   a+ +      ee+++++++ar
  MMETSP1325-20131115|10942_1 858 QQPIDGPHITRRLDAGGYSDLRSFCADVRSLLATALAFsccedLEEDTEIVNAAR 912
                  89*******************************9999977666666777776665 PP

  == domain 2    score: 26.5 bits;  conditional E-value: 2.5e-09
   PF00439.20    1 ceqilndlqehklastFsapv......dakeapdYydiikrPidLktIqkklasgkyqslaqfekdlelvfsNavkyneeg 75  
                   c+ il+dl + + a  F  pv      d+     Y + + +P+dL tI  +l+ g y+s a+f +d+  ++ N++ y++ +
  MMETSP1325-20131115|10942_1  967 CQAILEDLYSVEGAVFFGFPVvtyfpkDDPTRFTYLSEVANPLDLGTIAVRLHTGFYDSCADFAADVDTMVGNCLSYWGAE 1047
                   667777777777555555555777545444444577789**************************************8854 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   2.4e-09   3.6e-06      40      86 ..     235     280 ..     109     283 .. 0.76
   2 ?   -3.8   0.0         9   1.4e+04      33      48 ..     354     369 ..     352     375 .. 0.56

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 2.4e-09
    PF12796.2  40 eivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvn 86 
                  + v+lL++ gad++a  kegnt+Lh+ +++++++l+ + l +ga++ 
  MMETSP1325-20131115|10942_1 235 AFVELLVS-GADPDAVGKEGNTALHWIAMSNRADLAAFVLAAGASPL 280
                  56666666.***********************************986 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 9
    PF12796.2  33 AaeagnleivklLlea 48 
                  Aa++ + +i+++L e+
  MMETSP1325-20131115|10942_1 354 AASRRSANIIRALREM 369
                  5555555555555544 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.059        89      17      31 ..     236     249 ..     233     251 .. 0.86
   2 !   16.3   0.1   3.5e-06    0.0054       2      29 ..     253     280 ..     252     284 .. 0.92
   3 ?   -0.7   0.0      0.85   1.3e+03       8      21 ..     353     366 ..     352     368 .. 0.91

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.059
                  HHHHHHHTTSSTTHB CS
   PF00023.25  17 vvklLlsqGAdlnaq 31 
                   v+lL+s GAd++a+
  MMETSP1325-20131115|10942_1 236 FVELLVS-GADPDAV 249
                  6999999.*****98 PP

  == domain 2    score: 16.3 bits;  conditional E-value: 3.5e-06
                  SCBHHHHHHHTTHHHHHHHHHHTTSSTT CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdln 29 
                  G+T+LH+ a++++++ + + l +GA++ 
  MMETSP1325-20131115|10942_1 253 GNTALHWIAMSNRADLAAFVLAAGASPL 280
                  9*************************96 PP

  == domain 3    score: -0.7 bits;  conditional E-value: 0.85
                  HHHHTTHHHHHHHH CS
   PF00023.25   8 lAalrgnlevvklL 21 
                  +Aa+r ++++++ L
  MMETSP1325-20131115|10942_1 353 MAASRRSANIIRAL 366
                  69*********998 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.1   1.7e-07   0.00026       5      55 ..     243     292 ..     239     292 .. 0.95

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 1.7e-07
    PF13857.1   5 gpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldl 55 
                  g ad++a  ++gnt+Lh+ a+ ++++++ + la+ga++   d  g  +ld+
  MMETSP1325-20131115|10942_1 243 G-ADPDAVGKEGNTALHWIAMSNRADLAAFVLAAGASPLYYDHAGYQPLDY 292
                  4.89*********************************************97 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   2.5e-05     0.038      17      50 ..     237     269 ..     231     273 .. 0.83
   2 !   14.4   0.1   2.4e-05     0.036       1      40 [.     253     292 ..     253     292 .. 0.95
   3 ?   -2.4   0.0       4.5   6.8e+03       8      23 ..     807     822 ..     806     830 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.5e-05
    PF13637.1  17 vklLlekgidinrtdesGntaLhiAalrgnieil 50 
                  v+lL+ +g+d++++ ++GntaLh  a+ ++ +++
  MMETSP1325-20131115|10942_1 237 VELLV-SGADPDAVGKEGNTALHWIAMSNRADLA 269
                  56666.9******************998876655 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.4e-05
    PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhi 40 
                  g+taLh+ a+s+r +l+++ l+ g+++ + d  G  +L++
  MMETSP1325-20131115|10942_1 253 GNTALHWIAMSNRADLAAFVLAAGASPLYYDHAGYQPLDY 292
                  68***************************99999999986 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 4.5
    PF13637.1   8 aaisgrlelvklLlek 23 
                  aa+sg+l ++++Ll+ 
  MMETSP1325-20131115|10942_1 807 AAASGWLGTAHSLLAA 822
                  8999********9965 PP

>> PF00583.19  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   6.6e-06      0.01      26      68 ..     675     717 ..     653     729 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 6.6e-06
                  EEEEEEEESGGGTTTT-HHHHHHHHHHHHHHTTHSEEEEEEET CS
   PF00583.19  26 ayieglaVspeyrgqGiGkaLleallekarerglerieleves 68 
                  +++ ++a +p + ++G++++L+ al+++a e ++   +l+  +
  MMETSP1325-20131115|10942_1 675 VEVLFMATHPLAKRRGLATRLVSALKQRAVEMEAALRGLDGSP 717
                  578899************************9776555555555 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00011      0.17       2      28 ..     253     279 ..     252     281 .. 0.90
   2 ?    0.1   0.0      0.81   1.2e+03       8      21 ..     353     366 ..     352     372 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00011
    PF13606.1   2 GnTpLhlAasngrielveaLlengadi 28 
                  GnT+Lh+ a ++r +l+ + l +ga +
  MMETSP1325-20131115|10942_1 253 GNTALHWIAMSNRADLAAFVLAAGASP 279
                  9****************9999999865 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.81
    PF13606.1   8 lAasngrielveaL 21 
                  +Aas+++ ++++aL
  MMETSP1325-20131115|10942_1 353 MAASRRSANIIRAL 366
                  8***********99 PP

>> PF08445.5  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   3.2e-05     0.048      23      52 ..     676     705 ..     658     710 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3.2e-05
                  -----EE-GGG--------HHHHHHHHHH- CS
    PF08445.5  23 elgalqvlpehrrrGlgsrlvkalakeiae 52 
                  e+  + ++p ++rrGl++rlv+al ++ +e
  MMETSP1325-20131115|10942_1 676 EVLFMATHPLAKRRGLATRLVSALKQRAVE 705
                  566799******************998766 PP

>> PF05701.6  Plant protein of unknown function (DUF827)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.0     9e-05      0.14     334     423 ..      71     170 ..      47     180 .. 0.63

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9e-05
    PF05701.6 334 keskareelvelslklqq..lsseaeeakkeAeeare......eveklkee..aeqtkaaleeaelrLeaalkeaeaakaaEklAlaeikaLsekeesak 423
                  +e  + + ++e + +l+   + ++ +e++ +A +are       +++++e   a++t a    a +rL++a ++aeaa aa ++Ala ++ Ls + +  +
  MMETSP1325-20131115|10942_1  71 REPIEGSSSSECPIELDTpiAWKKLKEVRDAARSARElfgctsDAQDAAEKalAAATGADKIVAMKRLQEADEAAEAAEAAHAKALAYLQSLSCRRQNHS 170
                  555555555666655554334555666666666666511111123333333003344444446789**************************98877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1083 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       630  (0.0460796); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.55u 0.34s 00:00:01.89 Elapsed: 00:00:00.74
# Mc/sec: 3507.10
//
Query:       MMETSP1325-20131115|10948_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   13.1   0.4      0.027   13.0   0.3    1.2  1  PF10498.4  Intra-flagellar transport protein 57


Domain annotation for each model (and alignments):
>> PF10498.4  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3     2e-06     0.027     295     358 ..      64     127 ..      14     128 .. 0.92

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2e-06
    PF10498.4 295 svsektaelseiseeleqvkqeleergsklsdgsplvkikqaitkLkeeikqldlrigvlqhtl 358
                  + +++++e++ i+e+ e   +++ e++skl  +++++  + +i+++  +  +l  r g+ ++t+
  MMETSP1325-20131115|10948_1  64 QAAKLQDEIKAIMEKGEDAFTQISEHDSKLLAAEQIMGLRRQIKRVADDQTDLRARXGLASETI 127
                  4567899***************************************************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       833  (0.0609274); expected 273.4 (0.02)
Passed bias filter:                      697  (0.0509801); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 770.59
//
Query:       MMETSP1325-20131115|10953_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   12.1   0.0       0.22   11.3   0.0    1.5  2  PF04607.12 Region found in RelA / SpoT proteins


Domain annotation for each model (and alignments):
>> PF04607.12  Region found in RelA / SpoT proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.6e-05      0.22      56     111 ..       5      62 ..       1      67 [. 0.79
   2 ?   -1.7   0.0      0.19   2.6e+03       2      17 ..      64      79 ..      63      91 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.6e-05
                  EEEEEEEE.S---------EEEEEE------EEEEEEEEEEEHHHHHHHH.HHHHHHH CS
   PF04607.12  56 kpkrfkdy.iaepkengYrslHtvveaekgeekvlvEiQiRtiemeawae.iehhlrY 111
                  ++ r+kd  +++p + g+r l +     ++++++++E+Qi + +m    + ++ + +Y
  MMETSP1325-20131115|10953_1   5 VIVRVKDRfVEKPSPGGWRDLMINFYLADDPNQHVCEVQIVSNKMLVARKgLKENANY 62 
                  56677877356************9999*************999986555566666666 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.19
                 ----HHHHHHHHHH-- CS
   PF04607.12  2 RvKsiysiieKlrrkg 17
                 R++++ +i+eKl  ++
  MMETSP1325-20131115|10953_1 64 RTRNALEILEKLDARD 79
                 7778888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 559.15
//
Query:       MMETSP1325-20131115|10951_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1093.99
//
Query:       MMETSP1325-20131115|10954_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-21   74.9   0.0    4.4e-21   74.9   0.0    1.0  1  PF00503.15 G-protein alpha subunit
      0.003   16.9   0.2     0.0051   16.1   0.1    1.4  1  PF13555.1  P-loop containing region of AAA domain
  ------ inclusion threshold ------
       0.01   14.9   0.0      0.012   14.7   0.0    1.2  1  PF00025.16 ADP-ribosylation factor family


Domain annotation for each model (and alignments):
>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   9.7e-25   4.4e-21      51     118 ..      29      96 ..       9     102 .. 0.91

  Alignments for each domain:
  == domain 1    score: 74.9 bits;  conditional E-value: 9.7e-25
                  XXXXXXXEEEEEEEXXXXXXXHHHHHHHHHHHXXXXXXXXHHHHHHHHHHHHHHHHHHHHXXXHHHHH CS
   PF00503.15  51 ekkkkkkevklLlLGqgeSGKsTilkqfkllykpgfsreeraswraviylnivrsiktilealeklei 118
                  + +k ++e+klLlLG+geSGKsTi+kq+k+ly+ gfs e++a++r  i++n+++ i+++++a+ +le 
  MMETSP1325-20131115|10954_1  29 RLQKGQEEIKLLLLGAGESGKSTIFKQMKILYGAGFSAEDKANFRTKIHQNVLTGIQALCNAVIELEL 96 
                  678999********************************************************988775 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.1e-06    0.0051      25      51 ..      38      63 ..      27      74 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.1e-06
    PF13555.1 25 ntlltGasGsGKSTllDAiqtlLvpak 51
                 + ll Ga +sGKST++  ++ +L++a+
  MMETSP1325-20131115|10954_1 38 KLLLLGAGESGKSTIF-KQMKILYGAG 63
                 589************9.5666666665 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   2.6e-06     0.012       8      35 ..      30      57 ..      27      80 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 2.6e-06
                 C--.TSEEEEEEE--TT---HHHHHHHH CS
   PF00025.16  8 lklkkkelrilllGLDnaGKtTilkklk 35
                 l++ + e+++lllG  ++GK+Ti k++k
  MMETSP1325-20131115|10954_1 30 LQKGQEEIKLLLLGAGESGKSTIFKQMK 57
                 455589******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 536.58
//
Query:       MMETSP1325-20131115|10955_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.38s 00:00:00.64 Elapsed: 00:00:00.50
# Mc/sec: 249.22
//
Query:       MMETSP1325-20131115|10952_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.29   10.4   4.7       0.14   11.4   0.2    2.1  2  PF13567.1 Domain of unknown function (DUF4131)


Domain annotation for each model (and alignments):
>> PF13567.1  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2     1e-05      0.14      14      70 ..      36     111 ..      25     119 .. 0.72
   2 ?    0.3   0.4     0.026   3.6e+02      40      61 ..     250     271 ..     241     277 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1e-05
    PF13567.1  14 lgllllalllalllllllflkr...................rkrrrlllllglllllaglylllrapqpssndlsr 70 
                   g+++ +++++l+++++ +                       +rr l++l+g+ +l+a++++++    p+  +l++
  MMETSP1325-20131115|10952_1  36 CGAWWGGVAIVLTAVIAAVTAAtfynisprragameaslcsDPRRYLFVLAGVSMLVAACGAFVDGVYPGVLHLQK 111
                  4444444444444444444333444456999********99999999**************999988888777765 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.026
    PF13567.1  40 rlllllglllllaglylllrap 61 
                  +++l+++ +l+ ++l++l++a 
  MMETSP1325-20131115|10952_1 250 SIWLCCAGALVSGLLGILAWAS 271
                  5566666666666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       661  (0.048347); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.51s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 1615.14
//
Query:       MMETSP1325-20131115|10950_1  [L=540]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-55  189.2   0.0    1.4e-55  189.0   0.0    1.0  1  PF01593.19 Flavin containing amine oxidoreductase
    1.2e-15   57.1   0.3    2.6e-15   56.0   0.2    1.6  1  PF13450.1  NAD(P)-binding Rossmann-like domain
    3.7e-07   29.2   0.4    5.7e-05   22.0   0.3    2.2  2  PF00890.19 FAD binding domain
    1.3e-05   25.2   0.3    2.2e-05   24.4   0.2    1.4  1  PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
    2.9e-05   23.0   0.1    0.00027   19.8   0.1    2.1  2  PF01266.19 FAD dependent oxidoreductase
    0.00013   20.4   1.1     0.0002   19.8   0.8    1.2  1  PF03486.9  HI0933-like protein
     0.0003   19.8   0.0     0.0005   19.1   0.0    1.3  1  PF12831.2  FAD dependent oxidoreductase
     0.0005   19.9   0.1     0.0014   18.4   0.1    1.8  2  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
    0.00065   18.5   0.1      0.001   17.8   0.1    1.3  1  PF01134.17 Glucose inhibited division protein A
     0.0016   18.6   0.7      0.035   14.3   0.4    2.5  2  PF00070.22 Pyridine nucleotide-disulphide oxidoreductase
     0.0044   16.0   0.1     0.0084   15.1   0.1    1.3  1  PF01946.12 Thi4 family
  ------ inclusion threshold ------
      0.022   13.6   0.1      0.037   12.9   0.1    1.3  1  PF01494.14 FAD binding domain
      0.034   13.6   0.9      0.056   12.9   0.6    1.3  1  PF02737.13 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
      0.056   13.0   0.0       0.11   12.0   0.0    1.4  1  PF10727.4  Rossmann-like domain
      0.081   12.1   0.1       0.13   11.4   0.1    1.3  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
       0.11   12.1   0.1       0.22   11.1   0.1    1.5  1  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
       0.22    9.7   0.4        5.1    5.2   0.2    2.1  2  PF06100.6  Streptococcal 67 kDa myosin-cross-reactive antigen like family


Domain annotation for each model (and alignments):
>> PF01593.19  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.0   0.0   1.7e-58   1.4e-55       1     450 []      24     491 ..      24     491 .. 0.95

  Alignments for each domain:
  == domain 1    score: 189.0 bits;  conditional E-value: 1.7e-58
                  ----HHHHHHHH---EEEEEESSS-------EEE---..-EEE----EE-TTTCHHHHHHHHHHHC.TSEEEEEE-S-TCEEEEEEECCTCCCCHHHHHHHHHH....HHHHHHHHHHHCCCHHHHHHCHHHHCHCTHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGCGCTTTSSTCCHCHHHHTCCCCG-HCEEHCEEEH-HHHHHHHHHCCCCEGTTEETTEEEEEEEEET......SCEEEEEECSSEEEESEEEE-S-HHHCCCSEEES-EEHHHHHHHHHSEEE-EEEEEEEESSCCSGGT-...................CEECEECCCS..CCS-EEEEECECCCCC.HCCSEEEEEEEECCCHHHTTS-HHHHHHHHHHHHHHHHHH.SSB--SEEEEEETTTSTTT---ECCHBHHHHHHHHHHHHS-BBSSEEE--GTT-TTTTTS---TTT---HHHHHHH CS
   PF01593.19   1 laGLaAArqLlqaGfdVtvlEArdrvGGRirtfrskgdgylielGamwftgvygnllnlllelgle.lnlelfpftqkvflrlkygggvpkekdddlepeegll....sllssllefrrslespeslsqalesglllaepellelalesfssllsaqgflersleslfralldgalgflefensarlallslklndqeddgvefpgggltvpngylsvlvalaegldggvvrlnkrVksitkeg......dgvtvttedgrtykaDaVvvTlplgvlkkilflPplpdakqeairrlgfgsvnkvileferpfwpenl...................dlfgllvsds..asrgelvldwskssgs.pkrpvllsyvlgdaareleslsdeellervledLrkllgnedvpdpkdtvvtrWstdplargsysyvsvgssgddrpalaepvgprlffAGehtsrgypgtveGAvlSGlraAaril 450
                  laG++AA  L++aG+dV ++E r  vGG+++++++k dg +ie+G ++f+g+y nl+  +++ g   ++l+l+++t+++++++   g+ +++++ + +  ++++    ++l   ++  ++l+ + s   ++++++++ +  ++el++ +f +++++ g++  s+++++ ++ +++++ +++++sar++l+++ l++ +++ ++  +++  +p+  l++++ +++  +  ++ ln + +++ ++        +v+ +++ +++ ++D  v +l+++ +k  ++lP+  ++  ++ + + +  v+  ++  +++ w ++                    + ++ll+s++  +s++++    s+ +++ ++ + l++ v    a    + s ++++  + e+L +l++  +  + k   +t+ s+++l ++ y+  +  +   +rp +a++v  ++f+AG++t ++y  ++eGA +SGl +A++i+
  MMETSP1325-20131115|10950_1  24 LAGMVAAMDLADAGHDVEIFESRKFVGGKVSSWQDK-DGNHIEMGLHVFFGCYYNLFGIMKRTGSFdDHLRLKEHTHTFVNAGGGIGELDFRFPIGAPVSGLRSfaltEQLGVGDKLANALALGTSPIVRALVDFDGGMNMVRELDDITFTEWFMSKGGSRGSIDRMWDPIAYALGFLDCDHISARCMLTIFMLFAIRTEASVLRMLE-GSPQTFLHDPIIKYLDDRNVKINLNSPARELIHDVdaegkpTRVRGIKVGTKVHEFDVTVAALDVPGIK--KLLPENFRKYKDFDNIYNLECVPIATVMARFDGWVTEMnddaammktdgdfsngkgpGIDNLLYSADaeFSCFADLAVVSPGEYYkEGEGSLIQGVFDSRA---YDRSTDQIVADFIEQLNTLFP--SSKKLK---CTWSSVVKLGQSLYKEKPGQDK--YRPGQATSVE-NFFLAGSYTYQDYLDSMEGATRSGLMVADEII 491
                  79**********************************.6************************99962578899**************************99988********************************************************************************************************.***************************8888777667779999999999999*****************..9******96666669999999999999999999*999999999999999999888888888888888*****************9*999999999999988...8888899**************..566666...77********************..*********5.******************************97 PP

>> PF13450.1  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.2   3.2e-18   2.6e-15       1      67 [.      19      84 ..      19      85 .. 0.94

  Alignments for each domain:
  == domain 1    score: 56.0 bits;  conditional E-value: 3.2e-18
    PF13450.1  1 IvGaGlsGlvaAylLakagkdvlvlekrdrlGGraasvev.dgirvdygahifhgsgyyenlrrllre 67
                 +vGaGl+G+vaA  La+ag+dv+++e+r  +GG+++s+++ dg  ++ g+h+f+g+  y nl+ ++++
  MMETSP1325-20131115|10950_1 19 VVGAGLAGMVAAMDLADAGHDVEIFESRKFVGGKVSSWQDkDGNHIEMGLHVFFGC--YYNLFGIMKR 84
                 8***************************************677************7..7889888775 PP

>> PF00890.19  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.3   7.1e-08   5.7e-05       4      36 ..      19      51 ..      17      57 .. 0.91
   2 !    5.2   0.0    0.0085       6.8     144     182 ..     239     282 ..     137     295 .. 0.75

  Alignments for each domain:
  == domain 1    score: 22.0 bits;  conditional E-value: 7.1e-08
                 EE-------HHHHHHHCHTT-EEEE-SS-CCGS CS
   PF00890.19  4 ViGsGlAGlaAAleaaeaglkvavvekeqetgg 36
                 V+G+GlAG++AA+ +a+ag++v + e  + +gg
  MMETSP1325-20131115|10950_1 19 VVGAGLAGMVAAMDLADAGHDVEIFESRKFVGG 51
                 9***********************999988887 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.0085
                  HHHHHHHHC-TTEEEE-SEEEEE--BG...--...BB---EEEET CS
   PF00890.19 144 arllesareagkvdfqerhradeLive...dg...rvtGvvvenp 182
                   + +++++++ +v++  +++a+eLi++   +g   rv+G+ v  +
  MMETSP1325-20131115|10950_1 239 DPIIKYLDDR-NVKINLNSPARELIHDvdaEGkptRVRGIKVGTK 282
                  5677888888.5**************864422788*****99854 PP

>> PF13738.1  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.2   2.8e-08   2.2e-05       2      45 ..      19      61 ..      18      93 .. 0.90

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 2.8e-08
    PF13738.1  2 VvGAGaaGlafadnlleegatpliivDrnakpGghwlkaysfvr 45
                 VvGAG+aG+ +a  l ++g + + i+++++ +Gg+++ ++  + 
  MMETSP1325-20131115|10950_1 19 VVGAGLAGMVAAMDLADAGHD-VEIFESRKFVGGKVSSWQDKDG 61
                 9********************.***************9987655 PP

>> PF01266.19  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   3.4e-07   0.00027       2      39 ..      17      55 ..      16      64 .. 0.89
   2 ?    0.6   0.0      0.22   1.8e+02     257     308 ..     389     429 ..     239     468 .. 0.51

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 3.4e-07
                 EEEE----HHHHHHHHHHHTT-EEEEEESS.STTSSCGG CS
   PF01266.19  2 vviiGgGivGlstAyeLarrglkVtllekg.diasgaSg 39
                 + ++G+G +G  +A +La +g++V ++e++  +++  S+
  MMETSP1325-20131115|10950_1 17 IGVVGAGLAGMVAAMDLADAGHDVEIFESRkFVGGKVSS 55
                 569***************************777777776 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.22
                  TEEEE-EEE.SCEEESCBHHHH.HHHCCTHHH.HHHHHHHHHHHSGGGGGSEEE CS
   PF01266.19 257 gevlvgttd.grldrgataeessgedvdvdle.vdelleaaakllpqlkdaeil 308
                  g ++ g+ d + +            d + +++ v++++e++++l+p+ k+ + +
  MMETSP1325-20131115|10950_1 389 GSLIQGVFDsRAY------------D-RSTDQiVADFIEQLNTLFPSSKKLKCT 429
                  3333333332222............1.222334668999999999987776655 PP

>> PF03486.9  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.8   2.5e-07    0.0002       3      39 ..      17      53 ..      15      55 .. 0.93

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 2.5e-07
    PF03486.9  3 viviGgGaAGlmaAisaakrgakVllldkakklgrKi 39
                 + v+G+G AG+ aA+ +a++g++V ++++ k +g K+
  MMETSP1325-20131115|10950_1 17 IGVVGAGLAGMVAAMDLADAGHDVEIFESRKFVGGKV 53
                 669*******************************998 PP

>> PF12831.2  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   6.3e-07    0.0005       4      40 ..      19      55 ..      17      94 .. 0.94

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 6.3e-07
    PF12831.2  4 VvGGgpaGvaAAiaAarlGakvlLverrgvlGGmlts 40
                 VvG+g+aG++AA+  a +G +v + e r+++GG ++s
  MMETSP1325-20131115|10950_1 19 VVGAGLAGMVAAMDLADAGHDVEIFESRKFVGGKVSS 55
                 9********************************9986 PP

>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   1.7e-06    0.0014       3      43 ..      18      55 ..      16      81 .. 0.84
   2 ?   -3.0   0.0       6.3   5.1e+03      62      88 ..     240     266 ..     213     293 .. 0.58

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 1.7e-06
                 EEE----HHHHHHHHHHHTTSEEEEECSSSSSTBTSGGHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    PF07992.9  3 viiGgGpaGlsaakdlaqkglkvaliekeggtcvnrgclpk 43
                  ++G+G aG+ aa dla++g++v ++e  +   +++g +++
  MMETSP1325-20131115|10950_1 18 GVVGAGLAGMVAAMDLADAGHDVEIFESRK---FVGGKVSS 55
                 59************************6644...56665555 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 6.3
                  HHHHHHHHCTCEEEHCHEEEEEETTTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    PF07992.9  62 kvvdelekagieilleknvvkidsgsk 88 
                   +++ l+ ++++i+l++ + +++++  
  MMETSP1325-20131115|10950_1 240 PIIKYLDDRNVKINLNSPARELIHDVD 266
                  555666777888888777777633322 PP

>> PF01134.17  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1   1.3e-06     0.001       2      28 ..      17      43 ..      16      66 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1.3e-06
                 EEEE-------HHHHHHHH----EEEE CS
   PF01134.17  2 viViGgGhAGceAAlaaarlGakvlLi 28
                 + V+G+G+AG+ AA+ +a +G++v ++
  MMETSP1325-20131115|10950_1 17 IGVVGAGLAGMVAAMDLADAGHDVEIF 43
                 67**********************998 PP

>> PF00070.22  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.4   4.4e-05     0.035       1      32 [.      16      47 ..      16      55 .. 0.91
   2 ?    1.4   0.0      0.46   3.7e+02      44      72 ..     239     267 ..     223     279 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.4e-05
                 EEEEE---HHHHHHHHHHHHTTSEEEEEESSS CS
   PF00070.22  1 rvvvvGGGyiGlElAaalaklgkkVtvierrd 32
                 ++ vvG+G+ G+ +A  la+ g++V ++e r+
  MMETSP1325-20131115|10950_1 16 KIGVVGAGLAGMVAAMDLADAGHDVEIFESRK 47
                 578*************************9886 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.46
                  HHHHHHHHHTTEEEETTEEEEEEEESEEE CS
   PF00070.22  44 kilqkklekngievllntkveeiegsadg 72 
                  + + k+l ++++++ ln+ + e+ ++ d 
  MMETSP1325-20131115|10950_1 239 DPIIKYLDDRNVKINLNSPARELIHDVDA 267
                  567899************99999977775 PP

>> PF01946.12  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1     1e-05    0.0084      19      55 ..      16      52 ..      10      58 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1e-05
                 EEEEE-------HHHHHHHTSTS-EEEEESSS----- CS
   PF01946.12 19 DvvivGaGssGltaayylakkdlkvailerklsiGGG 55
                  + +vGaG +G++aa  la ++  v i+e++  +GG 
  MMETSP1325-20131115|10950_1 16 KIGVVGAGLAGMVAAMDLADAGHDVEIFESRKFVGGK 52
                 5779**************************9999985 PP

>> PF01494.14  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   4.6e-05     0.037       3      33 ..      16      46 ..      14      48 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.6e-05
                 CEEE--------HHHHHHHHH.HHEEEEESS CS
   PF01494.14  3 dVlIVGaGpaGlmlallLseaGvrvvlvekh 33
                 ++ +VGaG+aG+++a+ L+ aG +v + e +
  MMETSP1325-20131115|10950_1 16 KIGVVGAGLAGMVAAMDLADAGHDVEIFESR 46
                 6789******************999888765 PP

>> PF02737.13  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.6     7e-05     0.056       1      31 [.      16      46 ..      16      55 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 7e-05
                 EEEEE---------HHHHHCT.SEEEEE-S- CS
   PF02737.13  1 kvaVvGaGtmGagiAavfaragleVvlvdis 31
                 k++VvGaG+ G   A+ +a+ag++V +++ +
  MMETSP1325-20131115|10950_1 16 KIGVVGAGLAGMVAAMDLADAGHDVEIFESR 46
                 69************************99875 PP

>> PF10727.4  Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00014      0.11       7      38 ..      11      42 ..       4      50 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00014
    PF10727.4  7 rsarLsvGiisaGrvgvalgealeraghvvva 38
                 ++ +L++G++ aG +g+  + +l+ agh v  
  MMETSP1325-20131115|10950_1 11 NKEKLKIGVVGAGLAGMVAAMDLADAGHDVEI 42
                 5789************************9975 PP

>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00016      0.13       2      42 ..      16      59 ..      15      72 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00016
                 EEEEE------------TTT---EEE---S-H...HHHHHHH-- CS
    PF03721.9  2 kiaviGlGYvGlptavvlaekghevvgvDine...ekvdklnsg 42
                 ki+v+G+G  G+++a+ la  gh+v +++  +    kv++++ +
  MMETSP1325-20131115|10950_1 16 KIGVVGAGLAGMVAAMDLADAGHDVEIFESRKfvgGKVSSWQDK 59
                 8************************9988765333455555555 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00027      0.22       1      31 [.      16      46 ..      16      63 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00027
                 EEEEE-------HHHHHHHTTEEEEEEE-S- CS
   PF01210.18  1 kvavlGaGswGtalAkvlaenghevrlWvre 31
                 k++v+GaG  G   A+ la+ gh+v ++  +
  MMETSP1325-20131115|10950_1 16 KIGVVGAGLAGMVAAMDLADAGHDVEIFESR 46
                 79***********************999876 PP

>> PF06100.6  Streptococcal 67 kDa myosin-cross-reactive antigen like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2    0.0063       5.1       7      72 ..      19      77 ..      13      97 .. 0.74
   2 ?    2.4   0.0     0.042        34     209     245 ..     237     273 ..     221     294 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0063
    PF06100.6  7 liGsGlaalaaavflirdgqmdGekihileeldlaGGsldGaeleelGyvvrGGrelenhfevlWd 72
                 ++G+Gla++ aa+ l      +G+ ++i+e  +  GG +   + ++  ++  G   +   f + ++
  MMETSP1325-20131115|10950_1 19 VVGAGLAGMVAAMDLA----DAGHDVEIFESRKFVGGKVSSWQDKDGNHIEMGLHVF---FGCYYN 77
                 89*********98664....4699*************99988877777776664444...333333 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.042
    PF06100.6 209 lvlPlvkylkshgvdfeynvkvedievdiskskkvak 245
                  l  P++kyl++ +v++++n    ++  d+ ++ k ++
  MMETSP1325-20131115|10950_1 237 LHDPIIKYLDDRNVKINLNSPARELIHDVDAEGKPTR 273
                  557****************999988877777666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      338  (0.0247221); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.75u 0.56s 00:00:01.31 Elapsed: 00:00:00.56
# Mc/sec: 2270.23
//
Query:       MMETSP1325-20131115|10957_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.59
# Mc/sec: 300.56
//
Query:       MMETSP1325-20131115|10956_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.77    8.8   6.0      0.067   12.3   1.1    1.4  2  PF04065.10 Not1 N-terminal domain, CCR4-Not complex component
          2    6.8   8.5        2.6    6.4   0.0    2.1  2  PF04625.8  DEC-1 protein, N-terminal region
        6.8    6.5   7.7    1.6e+02    2.1   0.0    3.2  3  PF10138.4  Tellurium resistance protein


Domain annotation for each model (and alignments):
>> PF04065.10  Not1 N-terminal domain, CCR4-Not complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       1.2   5.6e+03      81     101 ..       3      23 ..       2      33 .. 0.68
   2 ?   12.3   1.1   1.5e-05     0.067     141     206 ..     226     292 ..     187     295 .. 0.74

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 1.2
   PF04065.10  81 klieeamekFkavEkemKtKa 101
                  +++ +++   ++ Eke K K 
  MMETSP1325-20131115|10956_1   3 RALRRQLKAGRNAEKERKKKG 23 
                  555566666667777777775 PP

  == domain 2    score: 12.3 bits;  conditional E-value: 1.5e-05
   PF04065.10 141 leaeveslsaqkkkk.kedaekeerleeleeklerhkfHieklElilrlleneeldpekvedikedi 206
                  +eae    +a  + + k++a++ee  +++ e+ ++      +lE+  +ll+n +ld+e+   i+++i
  MMETSP1325-20131115|10956_1 226 VEAEQAAAEAAVRNEvKAKAAREEARKRIVERRNKAGLGNGELEQAWQLLDNADLDAETSARIQDSI 292
                  4555555555556666778888888888888999999999*************************98 PP

>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   4.1     0.033   1.5e+02     102     136 ..     105     139 ..      92     150 .. 0.81
   2 ?    6.4   0.0   0.00058       2.6     111     173 ..     229     294 ..     218     298 .. 0.78

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.033
    PF04625.8 102 llgaaapvpapapaaaaapaaasapaadspaasvp 136
                   lg  a  p pap+++++p+  ++p      a+v 
  MMETSP1325-20131115|10956_1 105 ALGERAAFPPPAPSPTPTPTPVPPPVRRVSFAAVH 139
                  58889999999999999999999998877766665 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.00058
    PF04625.8 111 apapaaaaapaaasapaadspa.asvpdaaqpailgqaalqnaftflnpsnfda..ssllgqsvpt 173
                  + a a aa+ ++  a aa   a   + +  + a lg+  l++a+++l+ +++da  s+ + +s+p+
  MMETSP1325-20131115|10956_1 229 EQAAAEAAVRNEVKAKAAREEArKRIVERRNKAGLGNGELEQAWQLLDNADLDAetSARIQDSIPS 294
                  4678889999999998886655267999************************98434556666665 PP

>> PF10138.4  Tellurium resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.034   1.6e+02      46      64 ..      80      98 ..      74     112 .. 0.78
   2 ?    1.1   4.6     0.074   3.4e+02       6      26 ..     113     134 ..     107     139 .. 0.52
   3 ?   -0.4   0.0      0.21   9.4e+02      25      58 ..     154     187 ..     150     210 .. 0.80

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.034
    PF10138.4 46 aafgeirvnLnWnrrktqk 64
                  ++ge+r +L W+r+++ +
  MMETSP1325-20131115|10956_1 80 DDSGEVRTELPWERTESPT 98
                 589**********998755 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.074
    PF10138.4   6 papapaaapapapv.paaakvs 26 
                  p+pap+++p+p+pv p+ ++vs
  MMETSP1325-20131115|10956_1 113 PPPAPSPTPTPTPVpPPVRRVS 134
                  4555555555555534444465 PP

  == domain 3    score: -0.4 bits;  conditional E-value: 0.21
    PF10138.4  25 vslskitLtkekpsvsLekkgaafgeirvnLnWn 58 
                  vs  k  L++++ + +L+ +++  g   v   W 
  MMETSP1325-20131115|10956_1 154 VSNAKSALKQNSARATLTSSKGSRGGTAVRRAWV 187
                  7778888999999999999998888888877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       967  (0.0707285); expected 273.4 (0.02)
Passed bias filter:                      415  (0.030354); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.39s 00:00:01.08 Elapsed: 00:00:00.50
# Mc/sec: 1490.53
//
Query:       MMETSP1325-20131115|10958_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 848.71
//
Query:       MMETSP1325-20131115|10959_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 625.99
//
Query:       MMETSP1325-20131115|10961_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      159  (0.0116296); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 244.24
//
Query:       MMETSP1325-20131115|10960_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 860.73
//
Query:       MMETSP1325-20131115|10963_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.46
# Mc/sec: 427.18
//
Query:       MMETSP1325-20131115|10962_1  [L=230]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.35s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 1080.71
//
Query:       MMETSP1325-20131115|10964_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   13.7   0.2      0.029   13.2   0.2    1.4  1  PF03918.9  Cytochrome C biogenesis protein
      0.047   12.6   1.0      0.058   12.3   0.7    1.1  1  PF00121.13 Triosephosphate isomerase
       0.12   12.6   2.3        0.3   11.4   0.3    2.0  2  PF07536.9  HWE histidine kinase


Domain annotation for each model (and alignments):
>> PF03918.9  Cytochrome C biogenesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   6.5e-06     0.029      49      86 ..      43      80 ..       6      84 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 6.5e-06
    PF03918.9 49 qsiadSnapiAkdlRrkvremlkeGksdeeiidymveR 86
                  ++ +Sn +  ++l++++r++l+ ++ ++++++++  R
  MMETSP1325-20131115|10964_1 43 AKVFESNTKTTAELQNQIRSLLQTNEANAKVVAVLNGR 80
                 4689****************************998665 PP

>> PF00121.13  Triosephosphate isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.7   1.3e-05     0.058      99     160 ..      13      73 ..       6      77 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.3e-05
                  S.-BHHHHHHHHHHHHHTT-EEEEEESCEHHH..HHTTHHHHHHHHHHHHHHHTSSTGGGGGEE CS
   PF00121.13  99 fgetdeevakkvkaalkagltpvlCvgEtlee..reagktkevlkeqlkailekldeealknli 160
                  ++ ++++ a k++a+l+ ++++++ ++E  ++  ++++kt + l++q+++ l++ +++     +
  MMETSP1325-20131115|10964_1  13 YNASQAKTAAKTAAVLQGQVQSLILTNEAHAKvfESNTKTTAELQNQIRSLLQTNEAN---AKV 73 
                  6788999*********************999877788899999*********999887...333 PP

>> PF07536.9  HWE histidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.4     0.031   1.4e+02      22      67 ..      16      65 ..      11      69 .. 0.63
   2 ?   11.4   0.3   6.7e-05       0.3      17      51 ..      60      94 ..      52      98 .] 0.83

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.031
    PF07536.9 22 rsaesleefaeklsgRLqALsrahdl....ltreewagaeLaelleaela 67
                 ++a++ ++ a+ l+g +q+L  +++     + ++++ +aeL++ +++ l+
  MMETSP1325-20131115|10964_1 16 SQAKTAAKTAAVLQGQVQSLILTNEAhakvFESNTKTTAELQNQIRSLLQ 65
                 56677778888888888888544444333355555666777776666665 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 6.7e-05
    PF07536.9 17 arqtlrsaesleefaeklsgRLqALsrahdlltre 51
                 +r  l+++e  +++++ l+gR+++Ls++++ l ++
  MMETSP1325-20131115|10964_1 60 IRSLLQTNEANAKVVAVLNGRVKSLSATQTALETN 94
                 566778899999*****************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1409  (0.103057); expected 273.4 (0.02)
Passed bias filter:                      861  (0.0629754); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.43s 00:00:00.87 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|10966_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 264.09
//
Query:       MMETSP1325-20131115|10967_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 278.76
//
Query:       MMETSP1325-20131115|10968_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-41  138.1   0.0      6e-41  137.9   0.0    1.0  1  PF00958.17 GMP synthase C terminal domain


Domain annotation for each model (and alignments):
>> PF00958.17  GMP synthase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.9   0.0   4.4e-45     6e-41       2      93 .]       7      98 ..       6      98 .. 0.99

  Alignments for each domain:
  == domain 1    score: 137.9 bits;  conditional E-value: 4.4e-45
                 HHHHHHHHHHHHS-EE---EEEEE----------EEEEEE--B--SSS-------S-HHHHHHHHHHHH.C------EEEE---S-----S- CS
   PF00958.17  2 eelkkaglykkvwqafavllpvksvGvqgdkRtysyvvvlRavetsdfmtadvaelplevLeeiskrivnevegvsrVvyditsKPPaTiEw 93
                 eel+k+g+y+ + qaf+vllpvksvGv+gd+Rty++v+++R+v+t+d mtad++++p+evL +is+ri+nev+g++rV+ydi+sKPPaTiEw
  MMETSP1325-20131115|10968_1  7 EELHKNGQYRLIGQAFVVLLPVKSVGVMGDGRTYENVCAVRCVQTTDYMTADWYHMPYEVLGTISNRIINEVRGINRVCYDISSKPPATIEW 98
                 89999*************************************************************************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 504.76
//
Query:       MMETSP1325-20131115|10965_1  [L=524]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-30  102.4   0.1    1.8e-29  101.6   0.0    1.4  1  PF04366.7  Family of unknown function (DUF500)
    1.8e-18   66.1   7.9    2.9e-18   65.4   5.4    1.3  1  PF01363.16 FYVE zinc finger
  ------ inclusion threshold ------
        1.4    8.5   7.1        2.6    7.7   4.9    1.4  1  PF13639.1  Ring finger domain


Domain annotation for each model (and alignments):
>> PF04366.7  Family of unknown function (DUF500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.6   0.0     4e-33   1.8e-29       3     125 ..     364     489 ..     362     490 .. 0.98

  Alignments for each domain:
  == domain 1    score: 101.6 bits;  conditional E-value: 4e-33
    PF04366.7   3 glgaGfqiGveitdvVivlntkealeaftk..gklslGadlsvaagpvGrgaeadtdvse.gsapvysysksrGlfaGvslegtvlterkdanakfYgrkvtvkdIlkgeveappaakkLlevlkk 125
                  gl++G+ +G+e td++i + + ++l  ft+  g++ +G+++ +a+gpvGr+++ ++++s  g+++   ys+s+G++ G++l+g++++ rkd n+kfYg +vt+++Il+g+++ ppaak L+++l++
  MMETSP1325-20131115|10965_1 364 GLSFGAEVGLETTDMIIPICSAKSLSHFTRggGHMMMGGEAGLALGPVGRTITREVSASGaGTSSTKGYSHSKGIYGGIALQGAYVKVRKDVNQKFYGYDVTPAQILSGHTPVPPAAKSLYDALDE 489
                  89****************************999*************************999999************************************************************97 PP

>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   5.4   6.3e-22   2.9e-18       2      65 ..     184     246 ..     183     249 .. 0.95

  Alignments for each domain:
  == domain 1    score: 65.4 bits;  conditional E-value: 6.3e-22
   PF01363.16   2 kwvpdaeakkCeiCakkFsltrrrhhCrlCGkvvCskCsskrvekleeeaaeekevrvCkeCle 65 
                  +wv+d+++++C+ C  +F + rrrhhCr CG+++C++Cs +++  +  + +++++ rvC++C  
  MMETSP1325-20131115|10965_1 184 EWVSDSDSERCTACMLNFDWKRRRHHCRGCGRLFCDECSAQKLMLP-ASWGKKDPARVCNACAI 246
                  8******************************************888.999************75 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   4.9   0.00056       2.6       2      34 ..     193     226 ..     192     246 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00056
    PF13639.1   2 eCaiCldelsegeevvrlp.CgHvfHeeCldewl 34 
                   C+ C+ +++ +++ + ++ Cg +f++eC ++ l
  MMETSP1325-20131115|10965_1 193 RCTACMLNFDWKRRRHHCRgCGRLFCDECSAQKL 226
                  6********66888888888*********87754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       536  (0.0392042); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.90u 0.36s 00:00:01.26 Elapsed: 00:00:00.59
# Mc/sec: 2128.29
//
Query:       MMETSP1325-20131115|10969_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-19   67.1   0.0    1.1e-18   66.7   0.0    1.1  1  PF00085.15 Thioredoxin
    0.00013   22.0   0.2    0.00077   19.5   0.1    2.0  1  PF13098.1  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.014   15.3   0.1      0.023   14.5   0.1    1.4  1  PF13899.1  Thioredoxin-like
      0.016   14.9   0.0      0.024   14.3   0.0    1.2  1  PF13192.1  Thioredoxin domain
      0.048   13.7   0.0      0.082   12.9   0.0    1.4  1  PF13905.1  Thioredoxin-like
      0.063   13.1   0.2        0.1   12.4   0.1    1.3  1  PF00462.19 Glutaredoxin


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.0   4.8e-22   1.1e-18      16     100 ..     180     261 ..     163     265 .. 0.88

  Alignments for each domain:
  == domain 1    score: 66.7 bits;  conditional E-value: 4.8e-22
                  HHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEEEE---.-HHHHHHH CS
   PF00085.15  16 ksdklvlvefyApwCGhCkalaPeyeklaeelkekvvlakvdvdenkdlaseygvegiPtlklfkngkkveevegarekeklvaf 100
                  +  ++ +v f+A+wC  Ck++ P +++l++++  ++ + kvd++en++ a+++ ++ +P +++f +g  v++ +ga +   l+++
  MMETSP1325-20131115|10969_1 180 D-PNPAVVCFTAKWCENCKRMDPLFKELSNTYP-DIAFRKVDIEENSKAATNVAIRDVPYFMFFVDGALVSHHSGA-NPRLLKQT 261
                  3.5899***************************.*****************************************9.66666665 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   3.4e-07   0.00077       6     102 ..     182     253 ..     177     262 .. 0.73

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 3.4e-07
    PF13098.1   6 krvivvftdpdCpyCkklhkelkklndvtkylkdkfeviyvnidkskerseavldkdgekevkleekelgrklgvrgtPtivfldgeGklvarlpGy 102
                   + +v ft+ +C +Ck++++  k+   ++  +  ++ ++ v+i++++                    + ++++ +r +P ++f+  +G lv +++G+
  MMETSP1325-20131115|10969_1 182 NPAVVCFTAKWCENCKRMDPLFKE---LSNTYP-DIAFRKVDIEENS--------------------KAATNVAIRDVPYFMFFV-DGALVSHHSGA 253
                  5789**************998886...555664.7899999999655....................445666666666666664.56666665555 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1     1e-05     0.023      19      79 ..     183     240 ..     168     244 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1e-05
    PF13899.1  19 pllvifgadwcpdCqaldrdvlsdeevkaalaekfvllrvdvterdanl.eldrqgvPvvvf 79 
                  p  v f+a+wc+ C+++d  +   +e+      ++ + +vd++e ++ + + + + vP ++f
  MMETSP1325-20131115|10969_1 183 PAVVCFTAKWCENCKRMDPLF---KELSN-TYPDIAFRKVDIEENSKAAtNVAIRDVPYFMF 240
                  77899*************999...55666.56799999999976666442333233555555 PP

>> PF13192.1  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     1e-05     0.024       6      60 ..     188     247 ..     184     259 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1e-05
    PF13192.1   6 lgpg.CakCpkleeavkeaaeel.gikaevekvtdfeei.ekygVmsvPal..vingkvv 60 
                  ++ + C++C++++ ++ke  +++ +i    ++++++++   +  +  vP    +++g +v
  MMETSP1325-20131115|10969_1 188 FTAKwCENCKRMDPLFKELSNTYpDIAFRKVDIEENSKAaTNVAIRDVPYFmfFVDGALV 247
                  56677******************569999999988888889********87668888876 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.6e-05     0.082       4      32 ..     184     212 ..     181     238 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.6e-05
    PF13905.1   4 vllyfaaswcppckaftpelkelyeklka 32 
                   ++ f a wc++ck+  p  kel +++ +
  MMETSP1325-20131115|10969_1 184 AVVCFTAKWCENCKRMDPLFKELSNTYPD 212
                  6899******************9999974 PP

>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   4.5e-05       0.1       1      38 [.     185     227 ..     185     237 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.5e-05
                  EEEEE-STSHHHHHHHHHHHHTT.....HHEEEEETTTCHHHH CS
   PF00462.19   1 vvvftkptCpyCkkakrlLdelg.....vkyeeidvdedpeir 38 
                  vv ft ++C+ Ck++  l++el      ++++ +d++e++++ 
  MMETSP1325-20131115|10969_1 185 VVCFTAKWCENCKRMDPLFKELSntypdIAFRKVDIEENSKAA 227
                  789****************999877766779999999998554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.33s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 1406.56
//
Query:       MMETSP1325-20131115|10970_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-12   46.2   1.6    2.6e-06   27.3   0.0    2.1  2  PF13499.1  EF-hand domain pair
    1.8e-07   29.8   0.0    2.7e-06   26.1   0.0    2.6  3  PF00036.27 EF hand
    1.1e-06   27.9   0.7    2.5e-05   23.6   0.1    2.7  3  PF13405.1  EF-hand domain
    1.3e-05   24.1   0.2      3e-05   23.0   0.1    1.6  1  PF13202.1  EF hand
     0.0004   19.8   0.5     0.0031   16.9   0.0    2.4  3  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
        0.1   12.6   0.0        2.2    8.2   0.0    2.0  2  PF12040.3  Domain of unknown function (DUF3526)


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.2     8e-09   1.8e-05      15      65 ..      38      87 ..      34      88 .. 0.94
   2 !   27.3   0.0   1.1e-09   2.6e-06       3      61 ..      65     119 ..      61     123 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.6 bits;  conditional E-value: 8e-09
    PF13499.1 15 gyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65
                 g++++++L+++l  ++   +d+ + ++ +++f+ +D++gdGvl+  Ef ++
  MMETSP1325-20131115|10970_1 38 GSVTYADLVKILLDFQLRGHDRFLMRF-RELFQSIDSDGDGVLNEHEFKTL 87
                 99**************99999999998.999*****************986 PP

  == domain 2    score: 27.3 bits;  conditional E-value: 1.1e-09
    PF13499.1   3 keaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeE 61 
                  +e+F+++D+dgdg l+  e++ l ++ +  + +ee+ e+    ++++D  ++ +++f++
  MMETSP1325-20131115|10970_1  65 RELFQSIDSDGDGVLNEHEFKTLVRRVSPARDEEEINEL----LHQVDPGNTARVTFSD 119
                  779*************************55555555555....********99***987 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.33   7.5e+02      15      26 ..      38      49 ..      37      52 .. 0.87
   2 !   26.1   0.0   1.2e-09   2.7e-06       2      28 ..      64      90 ..      63      91 .. 0.93
   3 ?   -1.3   0.0      0.68   1.5e+03       1      21 [.      99     119 ..      99     125 .. 0.75

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.33
                 SEBEHHHHHHHH CS
   PF00036.27 15 GkIsfeEfkeal 26
                 G +++ +++++l
  MMETSP1325-20131115|10970_1 38 GSVTYADLVKIL 49
                 899*****9997 PP

  == domain 2    score: 26.1 bits;  conditional E-value: 1.2e-09
                 HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27  2 lkeaFkefDkDgdGkIsfeEfkealkk 28
                 ++e+F+ +D DgdG ++  Efk+++++
  MMETSP1325-20131115|10970_1 64 FRELFQSIDSDGDGVLNEHEFKTLVRR 90
                 79*********************9986 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.68
                  HHHHHHHHHCTTTSSEBEHHH CS
   PF00036.27   1 elkeaFkefDkDgdGkIsfeE 21 
                  e++e+   +D  ++ +++f++
  MMETSP1325-20131115|10970_1  99 EINELLHQVDPGNTARVTFSD 119
                  678888888988887888776 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.12   2.7e+02      15      27 ..      38      50 ..      34      56 .. 0.86
   2 !   23.6   0.1   1.1e-08   2.5e-05       1      28 [.      63      90 ..      63     106 .. 0.91
   3 ?   -2.4   0.0       2.4   5.6e+03       1      19 [.      99     117 ..      99     119 .. 0.65

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.12
                 --B---HHHHHHH CS
    PF13405.1 15 GkidaeELrdaLr 27
                 G ++ ++L+++L 
  MMETSP1325-20131115|10970_1 38 GSVTYADLVKILL 50
                 89********996 PP

  == domain 2    score: 23.6 bits;  conditional E-value: 1.1e-08
                 HHH---GCC-------B---HHHHHHH. CS
    PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrk 28
                 ++re+F+ +D dgdG ++ +E++ + r+
  MMETSP1325-20131115|10970_1 63 RFRELFQSIDSDGDGVLNEHEFKTLVRR 90
                 69*********************98885 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 2.4
                  HHH---GCC-------B-- CS
    PF13405.1   1 elreaFklfDkdgdGkida 19 
                  e++e+ ++ D  ++ ++++
  MMETSP1325-20131115|10970_1  99 EINELLHQVDPGNTARVTF 117
                  5677778888776655555 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1   1.3e-08     3e-05       2      25 .]      65      88 ..      64      88 .. 0.93

  Alignments for each domain:
  == domain 1    score: 23.0 bits;  conditional E-value: 1.3e-08
                 HHHHHHH--S----B-HHHHHHHH CS
    PF13202.1  2 kdtFrafDlNgDGkIsreELkrlv 25
                 +++F+ +D +gDG ++  E+k+lv
  MMETSP1325-20131115|10970_1 65 RELFQSIDSDGDGVLNEHEFKTLV 88
                 679*******************96 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.42   9.6e+02       3      15 ..      38      51 ..      36      60 .. 0.77
   2 !   16.9   0.0   1.3e-06    0.0031      28      53 ..      65      90 ..      63      90 .. 0.91
   3 ?   -1.6   0.0      0.81   1.9e+03      24      36 ..      97     109 ..      96     125 .. 0.74

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.42
    PF13833.1  3 GlItreeLkral.a 15
                 G++t ++L ++l +
  MMETSP1325-20131115|10970_1 38 GSVTYADLVKILlD 51
                 78888888888855 PP

  == domain 2    score: 16.9 bits;  conditional E-value: 1.3e-06
    PF13833.1 28 dilfrefDtdgdGkisfeEFcvller 53
                 ++lf  +D dgdG +++ EF++l++r
  MMETSP1325-20131115|10970_1 65 RELFQSIDSDGDGVLNEHEFKTLVRR 90
                 789999***************99875 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.81
    PF13833.1  24 eeevdilfrefDt 36 
                  eee+ +l++ +D 
  MMETSP1325-20131115|10970_1  97 EEEINELLHQVDP 109
                  6789999988885 PP

>> PF12040.3  Domain of unknown function (DUF3526)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.056   1.3e+02      29      71 ..       9      51 ..       3      68 .. 0.86
   2 ?    8.2   0.0   0.00097       2.2      45      90 ..      83     128 ..      69     144 .. 0.87

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.056
    PF12040.3 29 allakypvesvedlpvnfrglwylageqkgdkvlaplaealdq 71
                 +l+++y  + + +  ++++g   + +e++g+ ++a+l++ l +
  MMETSP1325-20131115|10970_1  9 KLIREYAADDARARAAGRSGRYSTQDEEEGSVTYADLVKILLD 51
                 78999999999999999*****************999987655 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00097
    PF12040.3  45 nfrglwylageqkgdkvlaplaealdqallaqqrlarrvgllsPvl 90 
                  +f+ l+   + ++ ++++++l+ + d    a+ ++++ v++lsP +
  MMETSP1325-20131115|10970_1  83 EFKTLVRRVSPARDEEEINELLHQVDPGNTARVTFSDSVTVLSPDI 128
                  788899999999********************************65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       400  (0.0292569); expected 273.4 (0.02)
Passed bias filter:                      389  (0.0284523); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 793.46
//
Query:       MMETSP1325-20131115|10971_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 244.53
//
Query:       MMETSP1325-20131115|10972_1  [L=410]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-41  141.1   0.0    4.9e-41  140.7   0.0    1.1  1  PF00685.22 Sulfotransferase domain
    4.7e-06   27.4   0.0    1.2e-05   26.1   0.0    1.6  1  PF13469.1  Sulfotransferase family


Domain annotation for each model (and alignments):
>> PF00685.22  Sulfotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.7   0.0   7.1e-45   4.9e-41       2     254 ..     103     354 ..     102     357 .. 0.88

  Alignments for each domain:
  == domain 1    score: 140.7 bits;  conditional E-value: 7.1e-45
                  TSEEEEESTT---HHHHHHHHHHHTCCETTGGG-TGCCT-HHHSEETT-TCCGSG.CCGCCCCCCHHGG-TTHHHHHCHCTSS.EEEE...CCCS.CCHHHTT-EEEEEE--HHHHHHHHHHHHHHCTCSTTT---HHHHHHHHH.HHHCCH-HHHHHHHHHH...TCCCCCEEEEEHHHHHH-HHHHHHHHHHHTT--.....HHHHHHHTCHHHHHC-CCCSSTCCH....S-SSEE---TTGGGT--HHHHHHHHHHHHHHHT CS
   PF00685.22   2 ddvlivtypKSGttwlqellslitsegdfekaeepalfnardrspfLelydlyfp.nslkpqehlsyshvaekvvrlralesprllktHlplkllpkslldknlKiiylvRnpkdvavSryhfsrslkllkepetpfeeffdlflegrvvcgsyfdhveewlk...lrkkgnvlflrYEdlkkdpakeikeiaeFlGip.....lekivkhlsfenmksnpvsnkskls....ekffrkgqvgdWkneltveqaekldeifqeklk 254
                   d++++typK Gtt +q+++ l+ + gd +k+  +        sp++e   +y     +k +    ++++  k  +  +   +r++ktH p++l+p + + + +K++++vR+p+dvavS+  +   +  +k  +  ++ f++lf+eg+v  g +fdh+++w++   +  +++++ ++YEdl+ + ++++ ++a F+G p     lek++  +  + m++++  +++k        +f+kg +g+Wk++ltv+  e l +++ +kl+
  MMETSP1325-20131115|10972_1 103 GDIVVATYPKAGTTLMQQIIMLLLNGGDSDKVGDVM-----VTSPWVER--EYCTsLDRKAG----FDEI--KSYTTGEGGTRRVFKTHAPFNLFPAASIPDGVKVVCVVRDPRDVAVSMHKHYLGIPRFKYTGP-MNHFVNLFCEGNVGHGCFFDHLRSWWEgyqQVGPEKMMWIKYEDLIGNKKETVSKVAAFIGAPdddalLEKVCSGSDIDVMRTKAEAKAKKGGtfgsATHFNKGVSGTWKKKLTVAEGETLTAHCAAKLE 354
                  79***************************6555544.....47999997..34443333333....4444..44444555569*****************************************99998887777.9***************************878889**************************************************99997665599*9999*************************99875 PP

>> PF13469.1  Sulfotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   1.7e-09   1.2e-05       3     205 ..     105     282 ..     104     297 .. 0.61

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 1.7e-09
    PF13469.1   3 vfilGlpRSGttlLaraLlalhpaelgllapqapaladapkglaeraallpllradllsalrrwdalprlldardaallllgalllvaelrallarrarlllllllsalarlvlllkdpahl.....lfpd.rfvvllRdPlavlasllrlllasllrrspyalrlalrkleallrllllgla........larlwlelne...........edlpadpeatlerlla 205
                  ++++  p++Gttl+++ ++                      g +   +++    +++ +++  + ++ + +d+   +++++g                           +r+v+    p +l     ++ + ++v+++RdP++v++s+++++l         +++ +  ++ ++ +l+++g          l+++w+ +++           edl  + ++t+ +++a
  MMETSP1325-20131115|10972_1 105 IVVATYPKAGTTLMQQIIM-----------------LLLNGGDSDKVGDVMVTSPWVEREYCTSLDRKAGFDEIKSYTTGEGG--------------------------TRRVFKTHAPFNLfpaasIPDGvKVVCVVRDPRDVAVSMHKHYLGI-------PRFKYTGPMNHFVNLFCEGNVghgcffdhLRSWWEGYQQvgpekmmwikyEDLIGNKKETVSKVAA 282
                  5677788999999996666.................44444444455555555555556666666666666666666664433..........................455554444444455566********************99999444.......334444444444444444444444444446666666666777777777777777776666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1723.70
//
Query:       MMETSP1325-20131115|10973_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 454.31
//
Query:       MMETSP1325-20131115|10976_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 451.08
//
Query:       MMETSP1325-20131115|10975_1  [L=177]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-11   43.5   0.1    3.6e-11   42.8   0.1    1.4  1  PF00566.13 Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> PF00566.13  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.1   2.6e-15   3.6e-11     159     214 .]       3      58 ..       1      58 [. 0.93

  Alignments for each domain:
  == domain 1    score: 42.8 bits;  conditional E-value: 2.6e-15
   PF00566.13 159 eldlslfaikWfltlfvrelpletvlrlwD.lflegakflllrialailkllrkell 214
                  +l l+lfa++W++ lf+++lp  tv+r+wD lfl+g+++ ll+++la+l++ ++ell
  MMETSP1325-20131115|10975_1   3 NLPLDLFASQWLVSLFSYALPPLTVCRVWDwLFLDGPTV-LLSVTLALLRRAQPELL 58 
                  78899*************************9999**966.*********99999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 815.68
//
Query:       MMETSP1325-20131115|10977_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 425.48
//
Query:       MMETSP1325-20131115|10979_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-14   52.9   0.1    1.3e-08   35.0   0.0    2.4  2  PF08238.7 Sel1 repeat
  ------ inclusion threshold ------
       0.11   12.3   0.1       0.18   11.6   0.1    1.3  1  PF10745.4 Protein of unknown function (DUF2530)


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.2e-06     0.015      16      39 .]       1      23 [.       1      23 [. 0.88
   2 !   35.0   0.0   1.9e-12   1.3e-08       3      37 ..      26      57 ..      24      59 .. 0.90

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.2e-06
    PF08238.7 16 GlgGvpkdpekAleWyekAAeqGh 39
                 G+ Gv+  +  A++W++ AA++Gh
  MMETSP1325-20131115|10979_1  1 GE-GVEVSLTNAFYWFRVAASRGH 23
                 66.78888888************9 PP

  == domain 2    score: 35.0 bits;  conditional E-value: 1.9e-12
    PF08238.7  3 AqynLGlyymylnGlgGvpkdpekAleWyekAAeq 37
                 +qyn G+++   nG+ G+p+d+++A++++ekAA+q
  MMETSP1325-20131115|10979_1 26 GQYNTGCML--ANGD-GTPRDLVEARRYFEKAAAQ 57
                 6*****555..***8.9****************99 PP

>> PF10745.4  Protein of unknown function (DUF2530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.6e-05      0.18      53      74 ..       6      27 ..       1      30 [. 0.82

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.6e-05
    PF10745.4 53 vlGtsiFllqrraaRRGsrGAq 74
                 v  t  F + r aa RG+rG q
  MMETSP1325-20131115|10979_1  6 VSLTNAFYWFRVAASRGHRGGQ 27
                 555788**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 550.65
//
Query:       MMETSP1325-20131115|10974_1  [L=429]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-30  106.3   0.0    1.9e-30  105.4   0.0    1.4  1  PF00270.24 DEAD/DEAH box helicase
    8.4e-17   60.6   0.0    3.9e-16   58.5   0.0    2.1  2  PF00271.26 Helicase conserved C-terminal domain
     0.0081   15.6   0.0      0.014   14.8   0.0    1.3  1  PF05729.7  NACHT domain
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.29   10.9   0.0    1.6  1  PF13307.1  Helicase C-terminal domain


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.4   0.0   5.6e-34   1.9e-30      31     170 ..       4     150 ..       2     153 .. 0.91

  Alignments for each domain:
  == domain 1    score: 105.4 bits;  conditional E-value: 5.6e-34
                  HHHHHHHHHHH..H....TTSTSEEEEEESSHHHHHHHHHHHHHHTTTSS.EEEEETTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHH..CCH.HTTTEEEEEECTHHHHHCTTTHHHHHHHHHHSHHTTTSEEEEEESS-THHH CS
                  xxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00270.24  31 flipvlqilletlk....kttikkalivaPtreLaeqtlnnlkkfkkypklrvlliiggvalardqlsvldngvdivvgTpgrlddlvst..gkl.nlsqvrllVlDEadrllsqgfsdqlnqilqilcdgkrlqvivlSATlpkdv 170
                  flip ++ ll+t+     +++  ++li++PtreLa+q++ + +k+++y+++r l+++gg+++++dq+ + ++ +d++v+Tpgrl+d++++  g   +l+++ l++lDEad++l++gf++ l++i++ l +++ +q++++SAT+p ++
  MMETSP1325-20131115|10974_1   4 FLIPSVEVLLNTQApppgPNSPIRVLILSPTRELAAQIAVEGQKLCQYQQFRFLCVVGGKDIKKDQRAMNSGSIDFLVATPGRLIDHLENtqGFAhRLQNILLFILDEADQMLDMGFKPALDKIMSYLPNKNGRQTLLFSATVPPSI 150
                  89999999999877888877888****************************************9999888********************8644445555****************************99999**********9665 PP

>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.45   1.6e+03      27      40 ..      70      83 ..      49      85 .. 0.83
   2 !   58.5   0.0   1.1e-19   3.9e-16       6      78 .]     230     301 ..     225     301 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.45
                 HHHHTTTSSEEEES CS
   PF00271.26 27 eqfnagkskvlvat 40
                 +  n+g+ ++lvat
  MMETSP1325-20131115|10974_1 70 RAMNSGSIDFLVAT 83
                 67899999****99 PP

  == domain 2    score: 58.5 bits;  conditional E-value: 1.1e-19
                  ----EEEE-TTS-HHHHHHHHHHHHTTTSSEEEESTTC-S---STTESEEEESSSBSSHHHHHHH------TT CS
   PF00271.26   6 kgikvailhgelpqnereeileqfnagkskvlvatnvaerGidlpdvnvVinfdlprsvtsyiQriGRtgRag 78 
                   g +++ +h++ +q  r++  + f+ag++ v+++++v +rG+d pdv++V +++l +++++yi+r+GRt+Rag
  MMETSP1325-20131115|10974_1 230 MGRQCFEIHSRKSQPARDKASQAFRAGTNVVMFTSDVTARGLDYPDVTFVLQVGL-TTKEQYIHRLGRTARAG 301
                  5778999************************************************.899************97 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   4.1e-06     0.014      16     124 ..      37     141 ..      36     167 .. 0.77

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 4.1e-06
    PF05729.7  16 LlqklasawakgklpqdafklvFflslrelsrskna..rsladlLfsqlpepaapvsevwivllelperlLlilDglDelvsdlgqlkekqpvrtlLselirkkllpeasl 124
                  L++++a++ +k +++q+ f+++ ++  ++++++++a   + +d+L++    ++++ +    +  +l++ lL+ilD +D++ + +g+   k ++++++s l +k+  +++ l
  MMETSP1325-20131115|10974_1  37 LAAQIAVEGQKLCQYQQ-FRFLCVVGGKDIKKDQRAmnSGSIDFLVATPGRLIDHLENTQGFAHRLQNILLFILDEADQMLD-MGF---KPALDKIMSYLPNKN-GRQTLL 141
                  78899999999999997.999999999999999999999*******************8888888899999********986.666...334444444444443.333333 PP

>> PF13307.1  Helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.5e-05      0.29       4      80 ..     202     276 ..     199     286 .. 0.85

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 8.5e-05
    PF13307.1   4 llkvvpggvlvffpSyslleevverlkeeleskkievfeekee.srekvleeykeskgaillavcrgkvseGidfsdd 80 
                   ++v +++++vff+  ++   ++e++ + + ++ +e+   k++  r+k  + ++++++ +++ +       G+d++d 
  MMETSP1325-20131115|10974_1 202 ATQVPNHKIIVFFSTARVTGLFAEFWVAMG-RQCFEIHSRKSQpARDKASQAFRAGTNVVMFTSD--VTARGLDYPDV 276
                  5566679********************998.46788888875549******************99..99999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.36s 00:00:01.10 Elapsed: 00:00:00.55
# Mc/sec: 1869.16
//
Query:       MMETSP1325-20131115|10985_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.64
# Mc/sec: 198.45
//
Query:       MMETSP1325-20131115|10986_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-08   33.1   0.0    8.8e-08   32.4   0.0    1.4  1  PF00005.22 ABC transporter
    0.00024   21.0   0.0    0.00028   20.8   0.0    1.1  1  PF13304.1  AAA domain
     0.0028   16.8   0.0     0.0033   16.5   0.0    1.1  1  PF02463.14 RecF/RecN/SMC N terminal domain
     0.0039   16.9   0.0      0.006   16.3   0.0    1.3  1  PF13558.1  Putative exonuclease SbcCD, C subunit
  ------ inclusion threshold ------
      0.032   13.8   0.0       0.68    9.5   0.0    2.1  2  PF09006.6  Lung surfactant protein D coiled-coil trimerisation


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   3.2e-11   8.8e-08      93     118 .]       2      27 ..       1      27 [. 0.97

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 3.2e-11
                  --HHHHHHHHHHTT--SEEEEESTTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00005.22  93 GqkqrvalArallkkpklllLDEPtn 118
                  Gqk r++lA+++ +kp+ll+LDEPtn
  MMETSP1325-20131115|10986_1   2 GQKCRLCLAASMYRKPHLLILDEPTN 27 
                  9************************8 PP

>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0     1e-07   0.00028     240     302 ..       2      58 ..       1      59 [. 0.88

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 1e-07
    PF13304.1 240 GtkrllalltallsalekgsvlliDEpEngLHPkllrrliellkelsnggsQlifTTHSpvll 302
                  G+k  l l+++ ++ +    +l++DEp n+L+ + + +li  lk+ +     +++++H+ +ll
  MMETSP1325-20131115|10986_1   2 GQKCRLCLAASMYRKP---HLLILDEPTNHLDMETIDALIVALKDFRG---GVLVVSHDQHLL 58 
                  6666689999999988...99*******************99988866...999999999887 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.2e-06    0.0033     147     205 ..       5      61 ..       3      74 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.2e-06
                  HHHHHHHHTSS--SEEEESSTTTT--HHHHHHHHHHHHHH-BTBEEEEE-S-HHHHTT- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF02463.14 147 laLlfAiqkvkpaplyllDeidaaLDeknvskvaellkeksknaQfivislreemleka 205
                  + L +A  ++++  l +lDe   +LD + + ++   lk  +    ++v+s+++++l+ +
  MMETSP1325-20131115|10986_1   5 CRLCLAASMYRKPHLLILDEPTNHLDMETIDALIVALKDFR--GGVLVVSHDQHLLTSV 61 
                  7899**********************************999..89*******9998765 PP

>> PF13558.1  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.2e-06     0.006      62      89 ..      15      42 ..       5      43 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 2.2e-06
    PF13558.1 62 psirlvfLDEAFsklDeeniasllellr 89
                 +++ l++LDE+++ lD e+i++l+ +l+
  MMETSP1325-20131115|10986_1 15 RKPHLLILDEPTNHLDMETIDALIVALK 42
                 4699*******************99887 PP

>> PF09006.6  Lung surfactant protein D coiled-coil trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.05   1.4e+02      13      30 ..       2      19 ..       1      20 [. 0.82
   2 ?    9.5   0.0   0.00025      0.68      12      30 ..      70      88 ..      67      94 .. 0.93

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.05
                 --HHHHHHHHHHHHHHHH CS
    PF09006.6 13 gqlqrLqaafsqYkKavL 30
                 gq  rL  a s Y+K  L
  MMETSP1325-20131115|10986_1  2 GQKCRLCLAASMYRKPHL 19
                 66679999*******876 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00025
                 ---HHHHHHHHHHHHHHHH CS
    PF09006.6 12 egqlqrLqaafsqYkKavL 30
                 egq+ r++  f+ YkK vL
  MMETSP1325-20131115|10986_1 70 EGQVARFNGDFADYKKKVL 88
                 7***************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 421.58
//
Query:       MMETSP1325-20131115|10980_1  [L=337]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       562  (0.0411059); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1648.11
//
Query:       MMETSP1325-20131115|10988_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 261.03
//
Query:       MMETSP1325-20131115|10981_1  [L=1353]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-12   47.3   0.1    5.2e-12   45.8   0.1    1.8  1  PF01841.14 Transglutaminase-like superfamily
    1.1e-05   25.2   0.0    0.00015   21.6   0.0    2.3  1  PF00868.15 Transglutaminase family


Domain annotation for each model (and alignments):
>> PF01841.14  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.1   7.6e-16   5.2e-12      53     113 .]     464     565 ..     453     565 .. 0.92

  Alignments for each domain:
  == domain 1    score: 45.8 bits;  conditional E-value: 7.6e-16
   PF01841.14  53 ncedfaslfvallRalGipaRvvtgylsgeeekeq........................ksvasedaHawvevyl.................egygWvpldp 113
                  +c  +a+l++++ RalGip+R vt+++s+++++++                        +  +++ +H+w+e+++                   +gW+++d+
  MMETSP1325-20131115|10981_1 464 QCFVYAALMTTVGRALGIPSRPVTTFQSAHDADKNraidkfykvdpdsgafdptdapdgAHDSVWSFHVWNEYWFdrptlgakcsdlgqsssCANGWQAVDA 565
                  8********************************99*************9999999999999999999********999999999999988888888999986 PP

>> PF00868.15  Transglutaminase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   2.2e-08   0.00015       5     117 ..     206     310 ..     204     312 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 2.2e-08
                  EEE--HHHHHHHTT-TTSS...--SEEEE---EEEEEEE----.-----EEEEEEE------TTTTSEEEEEE.E-------EEEEEEE---EEEEEEE--TTS----BEEEEEEE CS
   PF00868.15   5 svdlqleeNkkaHhTdkye...kerlvvRRGqpFsiklelnrpflpskdelslefsvgpepseekgtkvvvsvksekeeseWsakveessgkeltlsvtspadAivgryslsvetk 117
                  svd+ +++N ++ +T+ +     ++l+vRR  +F++ +     +l s+ + s+  + g+  +           ++e   ++ ++++++++ +e+ ++ t + dA+vg y+++v+++
  MMETSP1325-20131115|10981_1 206 SVDFLISRNTAKSNTEAFTdvpADTLIVRRSGTFEVLVAHPDGVLVSAVSASVSGKSGEAED-----------TTEDYGDQLTFELTQKDVTEVLITGTLSKDAPVGAYTITVQVQ 310
                  8******************9999*************99999885555555554444442222...........234446667778899999999*******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1353 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       531  (0.0388385); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.79u 0.35s 00:00:02.14 Elapsed: 00:00:00.92
# Mc/sec: 3524.21
//
Query:       MMETSP1325-20131115|10989_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 248.04
//
Query:       MMETSP1325-20131115|10991_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        90  (0.0065828); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|10994_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   0.2       0.14   11.7   0.1    1.2  1  PF09142.6 tRNA Pseudouridine synthase II, C terminal


Domain annotation for each model (and alignments):
>> PF09142.6  tRNA Pseudouridine synthase II, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   9.9e-06      0.14      13      42 ..      19      47 ..       8      57 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 9.9e-06
    PF09142.6 13 dlrhGrrLeaagiagvvAavaPdGrliALl 42
                 + + G  L+     g++Aa+  dGr++AL 
  MMETSP1325-20131115|10994_1 19 SAALGLVLTW-DDVGIAAATSHDGRVVALT 47
                 5555555555.7789*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 286.62
//
Query:       MMETSP1325-20131115|10995_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|10996_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00065   19.7   0.1        2.7    8.4   0.0    3.4  3  PF03929.11 PepSY-associated TM helix
      0.004   17.1   0.0       0.36   10.8   0.0    2.1  2  PF13273.1  Protein of unknown function (DUF4064)
     0.0044   15.6   1.9     0.0072   14.9   1.3    1.3  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.012   14.8   1.6       0.51    9.5   0.2    2.1  2  PF12263.3  Protein of unknown function (DUF3611)
       0.85    9.7   4.2       0.15   12.1   0.4    1.6  2  PF05425.8  Copper resistance protein D


Domain annotation for each model (and alignments):
>> PF03929.11  PepSY-associated TM helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0     0.001       2.7       8      25 ..      51      68 ..       5      70 .. 0.91
   2 ?   -0.5   0.9      0.71   1.9e+03       9      19 ..      93     103 ..      82     109 .. 0.51
   3 !    6.9   0.0     0.003       8.2       2      21 ..     107     150 ..     106     153 .. 0.79

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.001
   PF03929.11  8 lgglaallllvlllsGli 25
                 +g+ a + ++v++++G++
  MMETSP1325-20131115|10996_1 51 IGLYARWSFVVMAVTGAL 68
                 788899**********87 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.71
   PF03929.11   9 gglaallllvl 19 
                  +++a+ +l+++
  MMETSP1325-20131115|10996_1  93 LMVACGALCII 103
                  33333333333 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.003
   PF03929.11   2 grlHr........................ylgglaallllvlll 21 
                  +++H+                        + gg++al++ vl+l
  MMETSP1325-20131115|10996_1 107 YWWHYwsdtfgdddlvdhiktcaidcklgLSGGFVALFCGVLVL 150
                  78999999999999999999999999999777777777777654 PP

>> PF13273.1  Protein of unknown function (DUF4064)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00013      0.36      47      99 ..      47     103 ..      11     104 .. 0.74
   2 ?    4.4   0.0     0.013        35       8      30 ..     134     156 ..     131     182 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00013
    PF13273.1  47 eetildllstlvlilgvlaiilsilgiigsilvkkkp....klsGilfiiaaivsll 99 
                   e  + l + ++++++ ++  l+ l + +++++ k++    kl G+l+++++ ++++
  MMETSP1325-20131115|10996_1  47 LELRIGLYARWSFVVMAVTGALTSLFLLYTVIIDKRRlhceKLFGLLMVACGALCII 103
                  455566677788888888888888999999999996544458**********99887 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.013
    PF13273.1   8 LgliGgilgilagllalvigilg 30 
                  Lgl Gg + +++g+l+lv+++l 
  MMETSP1325-20131115|10996_1 134 LGLSGGFVALFCGVLVLVFSNLV 156
                  89999999999999999999884 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   1.3   2.6e-06    0.0072     210     321 ..      57     172 ..      27     183 .. 0.58

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 2.6e-06
   PF07690.11 210 willialllfffvfsglltllplylqevlglsp..glllaglllgllaligaigalllgrlsdrlgr............rrrlllallllllaalglallaftssavwlllvlvliGfglglv.fpt 321
                  w  +++++++++ +s++l ++ ++ + +l+  +  gll+++  +g+l++i+a  + ++ ++sd +g                    + l+l +++  +++++    +  l+++ + G+  g++ +++
  MMETSP1325-20131115|10996_1  57 W-SFVVMAVTGALTSLFLLYTVIIDKRRLHCEKlfGLLMVA--CGALCIISA--SYWWHYWSDTFGDddlvdhiktcaiD------CKLGLSGGFVALFCGVLVLVFSNLVPFCCNGCYDGTAeQIP 172
                  6.444555555566667777777668888888455544444..444444444..77********7777777776656533......33333333333333333333335778888888888874444 PP

>> PF12263.3  Protein of unknown function (DUF3611)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2   0.00019      0.51      14      79 ..      51     113 ..      38     119 .. 0.75
   2 ?    4.6   0.0    0.0063        17      52      77 ..     133     158 ..     124     165 .. 0.86

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00019
    PF12263.3  14 lrllgwigFWiqlvlgvvsalvLlfsvlvsgkvkspeknlglgig.lflailglvallfsiflafry 79 
                  + l ++++F + +v g+++ l Ll++v++ ++  + ek     +g l++a  +l ++ +s ++ ++ 
  MMETSP1325-20131115|10996_1  51 IGLYARWSFVVMAVTGALTSLFLLYTVIIDKRRLHCEK----LFGlLMVACGALCIISASYWWHYWS 113
                  33577888888889999999999999999999999998....4440566777799999999999975 PP

  == domain 2    score: 4.6 bits;  conditional E-value: 0.0063
    PF12263.3  52 nlglgiglflailglvallfsiflaf 77 
                  +lgl+ g+++ ++g+++l+fs ++ f
  MMETSP1325-20131115|10996_1 133 KLGLSGGFVALFCGVLVLVFSNLVPF 158
                  689*****************977665 PP

>> PF05425.8  Copper resistance protein D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.4   5.6e-05      0.15      10      63 ..      54     112 ..      49     128 .. 0.81
   2 ?   -2.6   0.1       2.1   5.7e+03      20      23 ..     144     147 ..     133     156 .. 0.48

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 5.6e-05
    PF05425.8  10 lalaavavllvtGlvnalvllg...l..agllttaygqlllaklalvvvmlalaainrf 63 
                  +a ++++v++vtG++ +l+ll    +    l+  +   ll++  +++ ++ a  +++++
  MMETSP1325-20131115|10996_1  54 YARWSFVVMAVTGALTSLFLLYtviIdkRRLHCEKLFGLLMVACGALCIISASYWWHYW 112
                  6889*************99966665233444444444799************9999998 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 2.1
    PF05425.8  20 vtGl 23 
                   +G+
  MMETSP1325-20131115|10996_1 144 FCGV 147
                  1222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       725  (0.0530281); expected 273.4 (0.02)
Passed bias filter:                      561  (0.0410328); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 978.51
//
Query:       MMETSP1325-20131115|11004_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0018   18.0   0.0     0.0032   17.2   0.0    1.4  1  PF13877.1 Potential Monad-binding region of RPAP3
  ------ inclusion threshold ------
       0.04   12.4   0.1      0.041   12.4   0.1    1.1  1  PF07755.6 Protein of unknown function (DUF1611)


Domain annotation for each model (and alignments):
>> PF13877.1  Potential Monad-binding region of RPAP3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   4.7e-07    0.0032       3      93 ..      29     127 ..      27     128 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 4.7e-07
    PF13877.1   3 apknayeFerawkelskske..eryeyLlnippdklpkifks....sldpdlLsdilkalnehlktkdee..lvleiLeeLskvkrFdlalmflsksek 93 
                   pk a+ +e++w+  +  ++    ++ +l  + +  + +f++     +d+d+L +++ a  + l    ++  ++l+ Le +++++rF+l++ fls+ +k
  MMETSP1325-20131115|11004_1  29 DPKGAFALEKDWRLQKTADDkrAYAAKILRSDGAVANALFGAkssgTVDADVLCELVVARLDVLGGPSSAlgKALGALELVATAPRFELTASFLSNGQK 127
                  7999********988654443344444555599999****98444469***********9997765555578***********************9887 PP

>> PF07755.6  Protein of unknown function (DUF1611)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1     6e-06     0.041     118     167 ..      93     138 ..      36     154 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 6e-06
    PF07755.6 118 vGTDcavGKrtTaleleealkerGlkaafvaTGqtGiliagegvplDavv 167
                   G ++a+GK   alel +++ +  l+a f++ Gq G + a     lDav 
  MMETSP1325-20131115|11004_1  93 GGPSSALGKALGALELVATAPRFELTASFLSNGQKGAVAAS----LDAVL 138
                  57899*******************************98753....55554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 810.68
//
Query:       MMETSP1325-20131115|11003_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-20   73.3   0.2    2.4e-19   69.2   0.0    2.1  2  PF00651.26 BTB/POZ domain
    4.3e-05   23.1   0.1    0.00083   19.0   0.0    2.2  2  PF07707.10 BTB And C-terminal Kelch


Domain annotation for each model (and alignments):
>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   3.5e-23   2.4e-19       2     110 ..      31     142 ..      30     143 .. 0.94
   2 ?    2.8   0.0     0.015     1e+02      81     107 ..     145     171 ..     140     174 .. 0.87

  Alignments for each domain:
  == domain 1    score: 69.2 bits;  conditional E-value: 3.5e-23
                  HHHHHTT-S--EEEEETTTEEEEE-HHHHHHH-HHHHHHTTTTTTTT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC......ECCHHHHHHHHHHHHT-HHHHCHHHHHHHH- CS
   PF00651.26   2 nelreqgelcDvtlvvgdgkefkahkavLaarSpyFkalftggeieestvseieledvepevfealLefiYtgeleit.....seenveelLaaadllqiprlkdaceeflkes 110
                  + ++++ + +D+t+ v+d k ++ah+++L ar + ++ ++ gg ++e +  ei ++d ++evf a+L+f+Yt+ ++       s + + +lLa+ad + +++lk++ce ++++s
  MMETSP1325-20131115|11003_1  31 KGMLNNPARSDITFIVED-KPIYAHRCILMARCEPLERMLDGG-FREDSAPEIVIQDHSFEVFLAFLQFLYTDDVSGLdpahlSIDFALSLLAVADQYLVEALKRKCEVSIQKS 142
                  668889999********5.************************.999999***********************999888999988999*********************99986 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.015
                  CCHHHHHHHHHHHHT-HHHHCHHHHHH CS
   PF00651.26  81 eenveelLaaadllqiprlkdaceefl 107
                   env+ +L +ad    p+l++ c ef+
  MMETSP1325-20131115|11003_1 145 VENVALMLTTADQRAAPALRKRCFEFV 171
                  589********************9997 PP

>> PF07707.10  BTB And C-terminal Kelch
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.027   1.8e+02       2      28 ..     117     143 ..     116     145 .. 0.88
   2 !   19.0   0.0   1.2e-07   0.00083       4      49 ..     151     196 ..     148     201 .. 0.92

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.027
   PF07707.10   2 lgilefAeaysleeLkeaakkfilknf 28 
                  l++l +A++y +e Lk +++  i+k +
  MMETSP1325-20131115|11003_1 117 LSLLAVADQYLVEALKRKCEVSIQKSI 143
                  778999*************99999876 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 1.2e-07
   PF07707.10   4 ilefAeaysleeLkeaakkfilknfeevvkseeFleLsleellell 49 
                  +l+ A++ +   L++++ +f+  +f ev+ ++ F +L+++ l+el 
  MMETSP1325-20131115|11003_1 151 MLTTADQRAAPALRKRCFEFVMAHFGEVLGTQTFADLPPSLLRELC 196
                  67889999********************************999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 1164.74
//
Query:       MMETSP1325-20131115|11009_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.1    8.4   8.9        1.1    8.4   6.2    1.2  1  PF12090.3  Spt20 family
        1.3    8.1   9.3        1.4    8.0   6.5    1.1  1  PF09309.5  FCP1, C-terminal
        2.7    6.7   6.7        2.9    6.6   4.7    1.1  1  PF14362.1  Domain of unknown function (DUF4407)
        7.3    5.8   8.6        7.9    5.7   6.0    1.0  1  PF10225.4  Uncharacterized conserved protein (DUF2215)
        7.8    4.4  26.8        7.8    4.4  18.6    1.0  1  PF09770.4  Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PF12090.3  Spt20 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   6.2    0.0004       1.1      89     110 ..      24      45 ..       4      72 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0004
    PF12090.3  89 ssesee...saeneqqaktqksknq 110
                  ++   +   +++++qq+++q++++q
  MMETSP1325-20131115|11009_1  24 QQ---HhqqQQQQQQQQQQQQQQQQ 45 
                  11...12212222222222222222 PP

>> PF09309.5  FCP1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   6.5   0.00051       1.4     160     195 ..      17      53 ..       7      72 .. 0.45

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00051
                  XX.XXXXXXXX-....-----------...------- CS
    PF09309.5 160 sd.dsdsekkkkedkeeeeeeaaqqrkqkaPeerres 195
                   d +s++++++++++++++++++qq++q++ +  +++
  MMETSP1325-20131115|11009_1  17 YDpHSQQQQHHQQQQQQQQQQQQQQQQQQSHHWGQQP 53 
                  2333333333333333333333333333333333333 PP

>> PF14362.1  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   4.7    0.0011       2.9     178     216 ..      15      56 ..       4      74 .. 0.49

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0011
    PF14362.1 178 aGkGpvykekkealdaaqaeletlkaqldaaqaelean...k 216
                  aG++p +++++  ++++q++ ++ ++q +++     ++   +
  MMETSP1325-20131115|11009_1  15 AGYDPHSQQQQHHQQQQQQQQQQQQQQQQQQSHHWGQQphqS 56 
                  555566666555555555555555555333333333224332 PP

>> PF10225.4  Uncharacterized conserved protein (DUF2215)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.0    0.0029       7.9     186     238 ..      20      72 ..      14      75 .] 0.85

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0029
    PF10225.4 186 pskrrllteeeyeeqgeeetrssleelreycnspecsvwktvsrlesprrfad 238
                   s++++  +++ ++q++++++++ +++  + ++p  s    ++r++ p++  +
  MMETSP1325-20131115|11009_1  20 HSQQQQHHQQQQQQQQQQQQQQQQQQSHHWGQQPHQSFNDGMQRQQAPNQYIQ 72 
                  4567778888889999999999999999********************88655 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  18.6    0.0028       7.8     218     264 ..      22      69 ..       4      75 .] 0.31

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0028
    PF09770.4 218 qqlqqapsqapaqapl.paqlpqqlqnlqqqqlpqlsqqmppqpvqpp 264
                  qq+q++++q+++q+++ ++q++qq  + +qq+ +  +++m+ q+ +++
  MMETSP1325-20131115|11009_1  22 QQQQHHQQQQQQQQQQqQQQQQQQSHHWGQQPHQSFNDGMQRQQAPNQ 69 
                  222222222222222211111111111112222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3469  (0.25373); expected 273.4 (0.02)
Passed bias filter:                     1513  (0.110664); expected 273.4 (0.02)
Passed Vit filter:                       300  (0.0219427); expected 13.7 (0.001)
Passed Fwd filter:                        25  (0.00182855); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.51s 00:00:01.12 Elapsed: 00:00:00.60
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|11008_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.075   13.0   0.1       0.66   10.1   0.0    2.4  3  PF13516.1 Leucine Rich repeat
       0.13   11.7   0.0       0.24   10.8   0.0    1.4  1  PF09385.5 Histidine kinase N terminal


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0         2   1.4e+04      14      24 .]     101     111 ..     100     111 .. 0.77
   2 ?   10.1   0.0   9.7e-05      0.66       2      22 ..     114     135 ..     114     137 .. 0.86
   3 ?   -1.0   0.0      0.36   2.4e+03       4      23 ..     143     163 ..     141     164 .. 0.72

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 2
    PF13516.1  14 igdeGlsaLan 24 
                  ++d  l aLan
  MMETSP1325-20131115|11008_1 101 VTDTALLALAN 111
                  57888889986 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 9.7e-05
    PF13516.1   2 knLtsLdLsnNq.igdeGlsaL 22 
                  ++L+s++L +N  ++d Gl aL
  MMETSP1325-20131115|11008_1 114 SCLESFNLYGNTrVTDTGLVAL 135
                  57******88765******998 PP

  == domain 3    score: -1.0 bits;  conditional E-value: 0.36
    PF13516.1   4 LtsLdLsnN.qigdeGlsaLa 23 
                  L+s  L+++ q++d  + a+a
  MMETSP1325-20131115|11008_1 143 LRSVGLGSCeQVTDVSVGAFA 163
                  667778888459998887776 PP

>> PF09385.5  Histidine kinase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   3.5e-05      0.24      79     104 ..      65      90 ..      57      99 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 3.5e-05
                  --THHHHHHHHHHHHHHHHHHHHC-- CS
    PF09385.5  79 vnigefvyNvNlgrseilkalleldv 104
                    +++ vyNvN+grs + ++  +ld 
  MMETSP1325-20131115|11008_1  65 LTLSDQVYNVNVGRSAVGDMTXRLDR 90 
                  567999**********9988888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 977.71
//
Query:       MMETSP1325-20131115|11014_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-24   82.8   0.2    1.2e-23   82.5   0.1    1.1  1  PF00313.17 'Cold-shock' DNA-binding domain
    0.00021   20.6   0.9    0.00039   19.7   0.4    1.6  1  PF08206.6  Ribonuclease B OB domain


Domain annotation for each model (and alignments):
>> PF00313.17  'Cold-shock' DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   0.1   1.7e-27   1.2e-23       1      65 [.      29      93 ..      29      94 .. 0.98

  Alignments for each domain:
  == domain 1    score: 82.5 bits;  conditional E-value: 1.7e-27
                 B---B----S..----B--------BB--TTT----T.TS------EEEEE-------BEEEEEE CS
   PF00313.17  1 vtGtVkwfnakkgfGFItredgekdvFvHqsaiqkdgfrsLkeGqeVeFevvegekgpeAanVtk 65
                 vtGt+kwf+++kgfGFI r+dg  dvFvHq+ i kdgfrsL+eG+  eF+vv + +++ A++Vt+
  MMETSP1325-20131115|11014_1 29 VTGTCKWFDSRKGFGFIVRDDGTGDVFVHQTRIHKDGFRSLAEGEPLEFKVVVDGGKTMAIDVTG 93
                 59*************************************************************97 PP

>> PF08206.6  Ribonuclease B OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.4   5.7e-08   0.00039       6      30 ..      38      62 ..      34      65 .. 0.91

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 5.7e-08
    PF08206.6  6 hkkGFGFvipDdgeeDifippeqmk 30
                 ++kGFGF++ Ddg  D+f+++++++
  MMETSP1325-20131115|11014_1 38 SRKGFGFIVRDDGTGDVFVHQTRIH 62
                 69*****************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 557.52
//
Query:       MMETSP1325-20131115|11016_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.07   12.9   0.1       0.07   12.9   0.1    1.7  2  PF11705.3 DNA-directed RNA polymerase III subunit Rpc31


Domain annotation for each model (and alignments):
>> PF11705.3  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   5.1e-06      0.07      26      77 ..       4      57 ..       2      89 .. 0.82
   2 ?   -4.2   2.2      0.83   1.1e+04     185     205 ..     218     238 ..     213     240 .. 0.55

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5.1e-06
    PF11705.3 26 dkasktpstlyPel..nlpvneelteeeelvaslyielrktlkdgpfytgsesl 77
                 ++a++ pst +P++  ++p ++++  + + +++  +++  t+ +g++y ++  +
  MMETSP1325-20131115|11016_1  4 QSATTPPSTTMPSIaiQVPYQAQPGMKIKAKLADGRSFLITIPEGAYYPTQLMV 57
                 567899*******96677777999999999999***************998733 PP

  == domain 2    score: -4.2 bits;  conditional E-value: 0.83
    PF11705.3 185 eeeeeeeeeedddfeDddddd 205
                  ee+e+e     d++ D+d+++
  MMETSP1325-20131115|11016_1 218 EEKEGEGGAPADEVADEDQEM 238
                  234444444556777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       532  (0.0389116); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1169.42
//
Query:       MMETSP1325-20131115|11021_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 352.92
//
Query:       MMETSP1325-20131115|11026_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-09   37.9   0.0      3e-09   36.8   0.0    1.6  1  PF13417.1  Glutathione S-transferase, N-terminal domain
    3.6e-07   29.8   0.5    6.4e-07   29.0   0.3    1.6  1  PF13410.1  Glutathione S-transferase, C-terminal domain
      0.002   17.9   0.0     0.0035   17.1   0.0    1.4  1  PF13409.1  Glutathione S-transferase, N-terminal domain
     0.0025   17.6   0.0     0.0055   16.5   0.0    1.6  1  PF00043.20 Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.053   13.4   0.0       0.12   12.2   0.0    1.7  1  PF00462.19 Glutaredoxin


Domain annotation for each model (and alignments):
>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0   1.1e-12     3e-09       1      73 [.      15      84 ..      15      87 .. 0.90

  Alignments for each domain:
  == domain 1    score: 36.8 bits;  conditional E-value: 1.1e-12
                 EE--TTSHHHHHHHHHHHH----EEE----TTTTHHHHHHH-TT--SSEEE----EEESHHHHHHHHHHH--- CS
    PF13417.1  1 LygspfSpyarkvrlaLeekglpyelvevtpgkkrpellalnpkgkvPvLeddgevltdSlvIieyLeerfpg 73
                 Ly+   S +  k+++aL  +g+py + ev+     ++  +l p  +vP ++ +g+ ltdS +I++ ++++++g
  MMETSP1325-20131115|11026_1 15 LYTLVGSQFGAKALVALDALGVPYVVQEVDIS---EMKTQLEPPHTVPQMRFNGKLLTDSSDILKAIDAEHEG 84
                 89999******************999998533...3447889****************************987 PP

>> PF13410.1  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.3   2.3e-10   6.4e-07       7      69 .]     187     261 ..     118     261 .. 0.84

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 2.3e-10
                  -GGGTT-THGGG------SS...----.---HHHHHHHHHHHHHHHHH---......---...TT----HHHHHH CS
    PF13410.1   7 araqlraaLdaleahLadgp..fllGd.rpslaDialapflvrldaagpgl......dir...eayPnlrawler 69 
                  +ra l + +  lea++a +   +++G   p++aD++l++ l rl   + ++      +++   +  P+l+aw+++
  MMETSP1325-20131115|11026_1 187 MRASLIEQIHSLEARFATDDqkYICGTaSPTAADFTLYAILERLVGNTGDSdmgagaPWLwneTQSPRLQAWHAA 261
                  788888888999***9988889**********************888777777777655588899*******875 PP

>> PF13409.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.3e-06    0.0035       3      68 ..      22      79 ..      20      81 .. 0.85

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHHHH----EEEEEEH....TTSHHHHHHHH------SEEE.----EEESHHHHHHHHH CS
    PF13409.1  3 PwahRvlialalkgledeisvvplepkgfekseellalsprgtVPvLwdkdgtvineSseIlryln 68
                  +  ++l+al  +g+++++++v     +    e   +l p  tVP +   +g+ +++Ss+Il+ ++
  MMETSP1325-20131115|11026_1 22 QFGAKALVALDALGVPYVVQEVDI---S----EMKTQLEPPHTVPQMRF-NGKLLTDSSDILKAID 79
                 567799****************44...2....22359***********8.9***********9987 PP

>> PF00043.20  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0     2e-06    0.0055      28      92 ..     186     263 ..     146     266 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2e-06
                  HHHHHHHHHHHHHHHHHH..TSSSSSSS.S-BHHHHHHHHHHHHHHHHTTTTT..........HTT-HHHHHHHHHHH CS
   PF00043.20  28 eakrkvlevlealeeels..gkkylvGd.kltlADialfpalewlqrldgnfl..........eeefPklkawlkria 92 
                  + +  + e++  le++++  ++ky++G+ ++t AD+ l+++le l    g+ +          e++ P l+aw   ++
  MMETSP1325-20131115|11026_1 186 KMRASLIEQIHSLEARFAtdDQKYICGTaSPTAADFTLYAILERLVGNTGDSDmgagapwlwnETQSPRLQAWHAAML 263
                  445556777888999999********98579***********955555555445588999***9*********99987 PP

>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.3e-05      0.12      10      59 ..      22      67 ..      13      68 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.3e-05
                 HHHHHHHHHHHHTTHHEEEEETTTCHHHHHHHHHHHSSBSSSEEEETTEE CS
   PF00462.19 10 pyCkkakrlLdelgvkyeeidvdedpeireelkelsgwrtvPqvfidgeh 59
                  + +ka  +Ld lgv+y++ +vd   e++  l+      tvPq  ++g++
  MMETSP1325-20131115|11026_1 22 QFGAKALVALDALGVPYVVQEVDIS-EMKTQLE---PPHTVPQMRFNGKL 67
                 677899999*******999999886.5555553...5599***9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 1367.92
//
Query:       MMETSP1325-20131115|11030_1  [L=253]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.33s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 1347.29
//
Query:       MMETSP1325-20131115|11034_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|11037_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 713.58
//
Query:       MMETSP1325-20131115|11038_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 186.92
//
Query:       MMETSP1325-20131115|11040_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|11042_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 371.85
//
Query:       MMETSP1325-20131115|11041_1  [L=398]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-91  303.7   0.1    9.3e-91  303.4   0.0    1.1  1  PF00928.16 Adaptor complexes medium subunit family
    8.7e-05   22.1   2.8    0.00017   21.2   1.9    1.5  1  PF01217.15 Clathrin adaptor complex small chain
    0.00045   19.6   0.4     0.0011   18.3   0.2    1.7  1  PF13774.1  Regulated-SNARE-like domain
  ------ inclusion threshold ------
       0.08   12.7   0.5       0.71    9.7   0.1    2.5  3  PF08460.5  Bacterial SH3 domain


Domain annotation for each model (and alignments):
>> PF00928.16  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.4   0.0   2.7e-94   9.3e-91       1     262 [.     129     396 ..     129     397 .. 0.98

  Alignments for each domain:
  == domain 1    score: 303.4 bits;  conditional E-value: 2.7e-94
                  -------------EEEEEEEEEEEEEE-----EEEEEEE-EEEEEE------EEEE---SS-B-........-----B-SEEEEETT-B-TTHHHH--EEE------EEEEEEEB-S-S--SEEEEEEEE.-----EEEEEEEEE-S-TT--BEEEEEEE------EEEEE--STTEEEE---..-EEEEE--B--.......-EE---EEEE----------EEEEEEEET-----------EEE--------EEEEEEEEEEEEEEE- CS
   PF00928.16   1 vpwrpsgikykknevyldviEkvsvlvdkdgkllnsevqGtialkskLsGmpevklsLndelni........ekkgielddvsfHpcVrlskfeservisFiPpdgefeLmrYrvseesklplklecqvkeeskgrievnvklesqlkrklslenvkitiplPkevskpvlkvsdGkakydseenvleWsikklpgekehalsgelelsaeqekeekdrekppvsveFsipgataSglkVrslkvsekkenvkpykwVryvtksgkysvr 262
                  v+wr++gik++kne++ldv+Ek+++lv+++g++lnse+ G i++ks+LsGmpe+kl+Lnd+l +        + k++el+d++fH+cVrl++fe++r+isFiPpdgef+Lm Yr+s+++k+ +++e  v+ +s +rie+++k++sq+k+++ ++nv+i ip+P++v++p++k s+G+++y +++++++Wsik+++g++e+ +++++ l+  q +e + + + p+sv+F+ip++t+Sg++Vr+lk++e k++++  +wVry+t+ g+y+ r
  MMETSP1325-20131115|11041_1 129 VSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLNSEIVGAIKMKSFLSGMPELKLGLNDKLMFeatgrpqsKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWIEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPSDVDSPSFKSSIGTVTYLPDRDAVVWSIKQFNGSREYLMRAHFGLPTVQAEEPEHW-RAPISVNFEIPYFTVSGIQVRYLKIIE-KSGYQALPWVRYITQNGDYQLR 396
                  68***********************************************************988***************************************************************7777**********************************************************************************999999.8***********************999.7******************998 PP

>> PF01217.15  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   1.9   4.9e-08   0.00017      48     127 ..      21     100 ..       4     114 .. 0.84

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 4.9e-08
                  SEEEETTEEEEEEEETTEEEEEEE-----HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTTB----BS--- CS
   PF01217.15  48 niveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdkyfgnVceldlvfnfekvylildEivsgGeilets 127
                   +   e+ + +Y +  +LY + + + + n  +++  + ++v+++  yfg+ +e  +  nf  +y +ldE  + G  +  +
  MMETSP1325-20131115|11041_1  21 PVFTEEGYTFVYIKHNNLYLMTVTKRNSNVALMFMYLYRLVQVFKDYFGELEEESIRDNFVIIYELLDETNDYGYPQSMD 100
                  4555567999**********9999999998889999*********************************98877666555 PP

>> PF13774.1  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.2   3.3e-07    0.0011      15      66 ..      19      70 ..       6     100 .. 0.84

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 3.3e-07
    PF13774.1 15 qklsyesgnyvfhylvedglvylvvadksyprrlafafLeeikreFlstygg 66
                  +  ++++ y+f y+ +++l+ ++v+++     l f +L ++ + F   +g+
  MMETSP1325-20131115|11041_1 19 MRPVFTEEGYTFVYIKHNNLYLMTVTKRNSNVALMFMYLYRLVQVFKDYFGE 70
                 577899**************************************99988863 PP

>> PF08460.5  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         3     1e+04      42      51 ..      22      31 ..      22      37 .. 0.69
   2 ?   -0.4   0.0      0.29   9.8e+02      49      64 ..     316     330 ..     311     330 .. 0.79
   3 ?    9.7   0.1   0.00021      0.71      34      60 ..     364     393 ..     354     395 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 3
                 EEE----EEE CS
    PF08460.5 42 vltadGyvWl 51
                 v+t +Gy+++
  MMETSP1325-20131115|11041_1 22 VFTEEGYTFV 31
                 5678888887 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.29
                  EEE-EE-----EEEEE CS
    PF08460.5  49 vWlsytsysGarrYvp 64 
                  vW s ++++G+r Y++
  MMETSP1325-20131115|11041_1 316 VW-SIKQFNGSREYLM 330
                  55.77899******85 PP

  == domain 3    score: 9.7 bits;  conditional E-value: 0.00021
                  --EEEEEEEEE----E...EE-EE-----E CS
    PF08460.5  34 GdkvkYDevltadGyv...WlsytsysGar 60 
                  G +v+Y +++++ Gy+   W++y +++G +
  MMETSP1325-20131115|11041_1 364 GIQVRYLKIIEKSGYQalpWVRYITQNGDY 393
                  889************9999*********76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.36s 00:00:01.08 Elapsed: 00:00:00.51
# Mc/sec: 1870.10
//
Query:       MMETSP1325-20131115|11050_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       135  (0.0098742); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 322.77
//
Query:       MMETSP1325-20131115|11051_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|11047_1  [L=282]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-07   29.1   0.0    3.6e-07   28.7   0.0    1.1  1  PF00501.23 AMP-binding enzyme


Domain annotation for each model (and alignments):
>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   2.6e-11   3.6e-07       1      78 [.      86     165 ..      86     204 .. 0.91

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 2.6e-11
                  EHHHHHHHHHHHHHHHHH----TT-EEEEE-SS.SHHHHHHHHHHHH---EEEE--TTS-H.HHHHHHHHHHTESEEEEE CS
   PF00501.23   1 TYreldervnrlaagLrklGvkpgdrVaillpn.spewviaflaclkaGavyvplyptlpa.erlayilndseakvlitd 78 
                  +Y++l + ++++a gL++ G +pgd  a++lp+ spe++++ +a++++G  +v ++  +++ e+l+ il d ++k l++d
  MMETSP1325-20131115|11047_1  86 SYEDLKKFSDAFAGGLLETGWGPGDALAVWLPKdSPETLVIQFAAARIGLLLVEIDVGMGDaEALRSILVDNKCKGLVYD 165
                  7******************************9659************************975899999999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 1275.04
//
Query:       MMETSP1325-20131115|11052_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        93  (0.00680222); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 278.76
//
Query:       MMETSP1325-20131115|11053_1  [L=317]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-12   46.0   0.0    3.8e-12   45.7   0.0    1.1  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
    4.4e-08   32.8   0.1    6.1e-08   32.3   0.0    1.1  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   5.5e-16   3.8e-12     139     205 ..     238     303 ..     170     312 .. 0.79

  Alignments for each domain:
  == domain 1    score: 45.7 bits;  conditional E-value: 5.5e-16
                  HC-EEEEEEEEETTCEEEEEEECCB-SEEEEEEE-EEEETTTTEEEE-----B--SE.EE-GGGBSCH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
   PF00443.24 139 lfkgqlksrlkclecknvkvklkrlPeiLiihlkRfkyseerssnkKlnekvefple.Ldlssyvnee 205
                  + +  + s+ kc ++   k++++rlP+iL++hlkRf  ++++ s++Kl++ v fp   Ld+s+yv +e
  MMETSP1325-20131115|11053_1 238 NIQEAYCSKCKCHRNASLKTEFWRLPPILVVHLKRF--QFTTYSRRKLHNLVVFPVDkLDMSPYVVRE 303
                  344455666666666677******************..99999************999*******987 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   8.9e-12   6.1e-08     156     237 ..     217     299 ..     201     311 .. 0.85

  Alignments for each domain:
  == domain 1    score: 32.3 bits;  conditional E-value: 8.9e-12
    PF13423.1 156 yppsekgiklenileeslnseknkeikcesckkkssaevakkftslPpiLgIclkrynekefgakrlntkvdiple.lrlphf 237
                  ++ +++ ++le++++ + ++e+++e+ c++ck++ +a+ + +f +lPpiL+++lkr + +    ++l   v +p + l+++  
  MMETSP1325-20131115|11053_1 217 TRLNDQPLTLEKCIDIFTQEENIQEAYCSKCKCHRNASLKTEFWRLPPILVVHLKRFQFTTYSRRKLHNLVVFPVDkLDMSPY 299
                  3447899************999999*********************************9988889998888888877888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 1433.29
//
Query:       MMETSP1325-20131115|11057_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-62  206.9   0.4    6.9e-62  206.7   0.3    1.0  1  PF02966.11 Mitosis protein DIM1
     0.0079   15.7   0.1     0.0099   15.4   0.1    1.1  1  PF00085.15 Thioredoxin


Domain annotation for each model (and alignments):
>> PF02966.11  Mitosis protein DIM1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.7   0.3     1e-65   6.9e-62       1     124 [.       4     127 ..       4     134 .. 0.98

  Alignments for each domain:
  == domain 1    score: 206.7 bits;  conditional E-value: 1e-65
   PF02966.11   1 llpkLetkeevdqailseeerlvviRFGrdedaeClklDelLakiaekvknfaviylvdidevpdfnkmyeledpvtvlffyrnkhmkvDlgtgdnnKlnfvledkqelidiietiyrgakkgk 124
                  llp+L+t+++vdqail+ee+r+vv+RFG+d d++C+++De+L +i+++vknfaviy+vdi+evpdfn+myel+dp+tv+ff+rnkh+++Dlgtg+nnK+n++++++qe+idiiet+yrga  g 
  MMETSP1325-20131115|11057_1   4 LLPHLSTGWAVDQAILNEEDRVVVVRFGHDYDSVCMQMDEVLCNIVDDVKNFAVIYVVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNNQEMIDIIETVYRGAAEGA 127
                  69**********************************************************************************************************************9985 PP

>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.4e-06    0.0099      13      86 ..      18      91 ..       9     109 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 1.4e-06
                 HHHHHHSCEEEEEE-TT---HHHHHHHHHHHHHHTT-TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEE CS
   PF00085.15 13 evaksdklvlvefyApwCGhCkalaPeyeklaeelkekvvlakvdvdenkdlaseygvegiPtlklfkngkkve 86
                  ++++d+ v+v f  ++   C ++  ++ ++ +++k+  v++ vd+ e +d  + y+     t+++f  +k++ 
  MMETSP1325-20131115|11057_1 18 ILNEEDRVVVVRFGHDYDSVCMQMDEVLCNIVDDVKNFAVIYVVDISEVPDFNTMYELYDPCTVMFFFRNKHIM 91
                 456688999***************************9999*****************99999999887776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 741.51
//
Query:       MMETSP1325-20131115|11073_1  [L=235]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-24   84.3   0.0      1e-23   83.3   0.0    1.5  1  PF02358.11 Trehalose-phosphatase
     0.0033   16.9   0.0     0.0049   16.3   0.0    1.2  1  PF08282.7  haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
       0.03   13.4   0.0      0.043   12.9   0.0    1.1  1  PF05116.8  Sucrose-6F-phosphate phosphohydrolase
      0.071   13.1   0.0      0.095   12.7   0.0    1.3  1  PF12710.2  haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PF02358.11  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.0     3e-27     1e-23      91     206 ..      19     134 ..      13     186 .. 0.88

  Alignments for each domain:
  == domain 1    score: 83.3 bits;  conditional E-value: 3e-27
   PF02358.11  91 evaeileektertpGsyvEekkfalavHyrnaddefgelqakelaehlesvlkdnpdlevtqgkkvvevrpvgvsKGkaverlleelgsa.nseddfvlciGDdrtDedmFkvlnkt 206
                   +++il+++t+rt Gs +  ++ ++a+ y ++d+e g +qa++l++ le vl  + +++v + k  +e+ p+ + KG +v+r+l++  ++ +s++dfv+ iGDd +De+mF+++ + 
  MMETSP1325-20131115|11073_1  19 IAMPILQRYTARTNGSSIRIRDPSVAWSYYRTDPEWGLMQARKLLAELEAVLLPH-NVQVIHEKGELEIVPRQLHKGVVVKRVLQKRAQRtGSTPDFVFVIGDDASDEKMFSSVMSY 134
                  5789***************************************************.****************************9988778*********************99875 PP

>> PF08282.7  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.4e-06    0.0049     173     226 ..      79     135 ..      56     141 .. 0.80

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 1.4e-06
                  EETTEEEEEE----HHHHHHHHH....HHTT--GGGEEEE----TTHHHHHH-TEEEE CS
    PF08282.7 173 ssegsleiipkgvsKgtalkkla....kalnisleeviafGDgeNDieMLelaglgvA 226
                   ++g lei+p + +Kg  +k+++    ++ + +++ v ++GD+  D +M++ + +++A
  MMETSP1325-20131115|11073_1  79 HEKGELEIVPRQLHKGVVVKRVLqkraQRTGSTPDFVFVIGDDASDEKMFSSV-MSYA 135
                  467889***********99998765558899*******************998.5555 PP

>> PF05116.8  Sucrose-6F-phosphate phosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.3e-05     0.043     128     199 ..      58     130 ..      43     144 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.3e-05
                  S-THHHHHHHHHHHT----EEEEEE---EEEEEETT-----HHHHH.HHHHT--...GGGEEEE---------TTS CS
    PF05116.8 128 kaaevlkeleqlLekreldvkviyssgkdlDilPkraskgeAlryL.akklele...lenilvcGdsgnDeellig 199
                  +a+++l+ele+ L  ++++  v +  +  l i+P++  kg  ++   +k+ +     ++ ++v Gd   De+++ +
  MMETSP1325-20131115|11073_1  58 QARKLLAELEAVLLPHNVQ--V-IHEKGELEIVPRQLHKGVVVKRVlQKRAQRTgstPDFVFVIGDDASDEKMFSS 130
                  4556677777777766654..3.556778***********999755044444336669****************53 PP

>> PF12710.2  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.8e-05     0.095     147     190 ..      83     128 ..      16     129 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.8e-05
                  --HHHHHHH.HHSHHHHHH.HH---T.T----S--EE---GGGHHHH CS
    PF12710.2 147 dgritgkld.gKaraverl.vvlayk.qvggrivvaiGDsanDlpal 190
                    +i ++ + +K ++v+r+ +++a++ ++  ++v++iGD a+D  ++
  MMETSP1325-20131115|11073_1  83 ELEIVPR-QlHKGVVVKRVlQKRAQRtGSTPDFVFVIGDDASDEKMF 128
                  4444555.356********************************8885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|11077_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 330.06
//
Query:       MMETSP1325-20131115|11072_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       542  (0.0396431); expected 273.4 (0.02)
Passed bias filter:                      468  (0.0342305); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 225.26
//
Query:       MMETSP1325-20131115|11082_1  [L=320]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      7e-26   90.1   2.2      7e-26   90.1   1.5    2.6  3  PF13864.1 Calmodulin-binding


Domain annotation for each model (and alignments):
>> PF13864.1  Calmodulin-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   6.0         1   1.4e+04      11      78 ..      45     112 ..      40     116 .. 0.68
   2 ?   -3.7   0.1      0.92   1.3e+04      10      19 ..     146     155 ..     141     167 .. 0.43
   3 !   90.1   1.5   5.1e-30     7e-26       1      98 []     219     316 ..     219     316 .. 0.99

  Alignments for each domain:
  == domain 1    score: -4.6 bits;  conditional E-value: 1
    PF13864.1  11 keeiaeekeeleaqeeeqeapkgvrllseeErlellegLkkkweelnkelqklplvldtlskkrrkee 78 
                  ++++a ++++++++e+++e+ + v++ +    ++  +   k +++ +++ +k  l+ldt + k+ +++
  MMETSP1325-20131115|11082_1  45 ENRLALREQQMRNRERRHEESEIVHRQQPFKMQQFRNVQSKLKSDTESRVEKSKLRLDTERLKENQTR 112
                  55566666666666666666666666666666666666666667788889999999999999988775 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 0.92
    PF13864.1  10 rkeeiaeeke 19 
                  r++e +++++
  MMETSP1325-20131115|11082_1 146 RQAEARAANA 155
                  2222222222 PP

  == domain 3    score: 90.1 bits;  conditional E-value: 5.1e-30
    PF13864.1   1 GkvPkYLkkrkeeiaeekeeleaqeeeqeapkgvrllseeErlellegLkkkweelnkelqklplvldtlskkrrkeelEkelaeiEedikklskkkv 98 
                  G+vP+YL++rk+++ae++++++a+++++++p g++l++eeErl++l+ L+++++e ++ l k+p+++ t+s+ ++k++lE++l+eiE++ k++s++kv
  MMETSP1325-20131115|11082_1 219 GNVPAYLQDRKAQWAEDEARRKAEARDPDCPAGMTLMPEEERLDTLRILNESEKETQALLFKMPMRVTTPSMVQKKNALEAKLKEIEAAKKIFSRQKV 316
                  89**********************************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       980  (0.0716793); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1564.97
//
Query:       MMETSP1325-20131115|11087_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 429.54
//
Query:       MMETSP1325-20131115|11088_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-31  107.0   4.1    4.1e-31  106.4   2.8    1.2  1  PF03134.14 TB2/DP1, HVA22 family
  ------ inclusion threshold ------
      0.099   11.8   2.9       0.13   11.4   2.0    1.2  1  PF07694.7  5TMR of 5TMR-LYT


Domain annotation for each model (and alignments):
>> PF03134.14  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.4   2.8     6e-35   4.1e-31       5      94 .]      67     156 ..      64     156 .. 0.97

  Alignments for each domain:
  == domain 1    score: 106.4 bits;  conditional E-value: 6e-35
   PF03134.14   5 aqllsnlvgllyPayaslkaleskdkeddkqwltYWivyslltvvesladillswiPlYyelKllflvwlvlpktkGaeviykkvirpll 94 
                   +l++nlvg++yPay+s+ a+esk+kedd+qwltYW+vy++++++e+++++++ +iP+Y ++K+ fl+++++p+t Ga+ +y+kv++p++
  MMETSP1325-20131115|11088_1  67 FKLVINLVGFVYPAYKSFMAIESKSKEDDTQWLTYWVVYGVFNILEHAMAFVVMMIPYYGLFKMGFLIFCYHPNTMGATQVYTKVLKPYV 156
                  5899***********************************************************************************985 PP

>> PF07694.7  5TMR of 5TMR-LYT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.0   1.9e-05      0.13      61     136 ..      48     123 ..      46     156 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.9e-05
    PF07694.7  61 lvGliagliagihRlslggftaiacgistilagllagliyrklkrrr..ktltpvvalligliveilqmliilllakp 136
                  +vG ia l   ++ ++lggf  ++ ++  ++ +  + ++ + + ++   + lt++v+++++ i+e   m+++++++ p
  MMETSP1325-20131115|11088_1  48 VVGGIALLPLFLIIYALGGFKLVINLVGFVYPAYKSFMAIESKSKEDdtQWLTYWVVYGVFNILEH-AMAFVVMMI-P 123
                  79*********************************9999999998879999999999999999986.778877777.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.43s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|11094_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 300.63
//
Query:       MMETSP1325-20131115|11095_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-16   58.9   0.0    4.9e-16   58.9   0.0    1.0  1  PF00797.12 N-acetyltransferase


Domain annotation for each model (and alignments):
>> PF00797.12  N-acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   3.5e-20   4.9e-16      60     124 ..       1      66 [.       1      81 [. 0.91

  Alignments for each domain:
  == domain 1    score: 58.9 bits;  conditional E-value: 3.5e-20
                  HHH---EEEEE---BEETCCTEE-------EEEEE----.EEEE------T--SS-EES----EEE CS
   PF00797.12  60 LkelGFevtllaarvveeeeeaastersHllllVtidge.tylvDvGFGgstllePlelesgkdqq 124
                  L+++GF+vt+l +rv+++++++  t+ +H+ l+V+++ge +yl+DvGF+g++ +eP++l+  +++ 
  MMETSP1325-20131115|11095_1   1 LEAIGFKVTPLLCRVRWGKKPDEETAFTHMCLKVEVEGEgEYLADVGFAGTNSIEPIPLDAASVPH 66 
                  899************************************9*******************9987755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 409.38
//
Query:       MMETSP1325-20131115|11097_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-08   32.8   0.9    2.3e-08   32.8   0.6    1.0  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
      0.036   13.3   0.3      0.038   13.3   0.2    1.2  1  PF07264.6  Etoposide-induced protein 2.4 (EI24)
      0.077   12.5   4.7       0.11   12.0   3.3    1.1  1  PF13630.1  SdpI/YhfL protein family


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.6     5e-12   2.3e-08      86     147 ..      17      78 ..       4      90 .] 0.84

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 5e-12
                  HHHHH---HHHHH--------TTTB-HHHHHHHHHHHHHHTHHHHHHHH--.---TTT---- CS
   PF00909.16  86 lfflfqlafaataitivsgavaerikfsayllfsallgtlvyppvahwvwgeggwlaklgvl 147
                  + f+  +   ++ ++i  g +aer++++  ++  ++l+ ++yp++ah++w e+g ++ ++  
  MMETSP1325-20131115|11097_1  17 AEFFLHMGLVIICVGIPVGTLAERATVTFTVVCTLILAIFIYPVIAHMFWHENGRFSAMREK 78 
                  45677777889*********************************************999875 PP

>> PF07264.6  Etoposide-induced protein 2.4 (EI24)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.2   8.3e-06     0.038      78     102 ..      32      64 ..       3      83 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 8.3e-06
    PF07264.6  78 l........lwflfvyvaslivspfwysdlaea 102
                  +        + ++f++v++li+++f+y+ +a  
  MMETSP1325-20131115|11097_1  32 IpvgtlaerATVTFTVVCTLILAIFIYPVIAHM 64 
                  03445567799*******************975 PP

>> PF13630.1  SdpI/YhfL protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.3   2.5e-05      0.11      29      73 ..      15      62 ..      14      63 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.5e-05
    PF13630.1 29 fagkifiisGlillllgliililn...svillillllilviviisiiy 73
                 +++ +f+ +Gl+++++g+ +  l    +v++ ++++lil i+i ++i+
  MMETSP1325-20131115|11097_1 15 YYAEFFLHMGLVIICVGIPVGTLAeraTVTFTVVCTLILAIFIYPVIA 62
                 57789999***********999999*9999999999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       687  (0.0502487); expected 273.4 (0.02)
Passed bias filter:                      480  (0.0351083); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 406.93
//
Query:       MMETSP1325-20131115|11098_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-07   29.4   0.2    1.4e-06   28.4   0.0    1.5  2  PF03871.9 RNA polymerase Rpb5, N-terminal domain
  ------ inclusion threshold ------
      0.012   15.3   0.0      0.012   15.2   0.0    1.1  1  PF04471.7 Restriction endonuclease


Domain annotation for each model (and alignments):
>> PF03871.9  RNA polymerase Rpb5, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0     2e-10   1.4e-06      56      93 .]       2      39 ..       1      39 [. 0.92
   2 ?   -1.8   0.0      0.55   3.7e+03      32      32 ..      61      61 ..      41      77 .. 0.57

  Alignments for each domain:
  == domain 1    score: 28.4 bits;  conditional E-value: 2e-10
    PF03871.9 56 lsisaerkedesgkilvfFceeekvgvktirtfvekmk 93
                 + +  e+++++ ++++vfF+eeek+gvk i++f+ +m+
  MMETSP1325-20131115|11098_1  2 MMLFVEHSNNQGDQLMVFFPEEEKLGVKPIKSFCDEMQ 39
                 6677899***************************9996 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.55
    PF03871.9 32 e 32
                  
  MMETSP1325-20131115|11098_1 61 A 61
                 1 PP

>> PF04471.7  Restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   1.8e-06     0.012      59     104 ..      24      72 ..       7      80 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.8e-06
    PF04471.7  59 nkvgreevqelvgalkkekadkgifvttsdftkeAkeeaeeln...rie 104
                   k g++ ++++ + ++k++++++i+v   ++t+ Ak+ ++e++   +ie
  MMETSP1325-20131115|11098_1  24 EKLGVKPIKSFCDEMQKNNCSRAIMVVKHSITPFAKQAIQEMAenyKIE 72 
                  6899***********************9996666655554432112566 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       688  (0.0503218); expected 273.4 (0.02)
Passed bias filter:                      608  (0.0444705); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 366.24
//
Query:       MMETSP1325-20131115|11096_1  [L=200]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-42  142.4   0.7    9.7e-42  141.9   0.5    1.2  1  PF02800.15 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
    1.1e-37  129.2   0.1    2.4e-37  128.0   0.0    1.6  2  PF00044.19 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> PF02800.15  Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.9   0.5   1.4e-45   9.7e-42       1      83 [.     116     199 ..     116     200 .] 0.99

  Alignments for each domain:
  == domain 1    score: 141.9 bits;  conditional E-value: 1.4e-45
                  -HHHHHHHHTTSEEEEEEEEEEEESS-T.........T-S-----S-ESSSSSS-----HHHHH-GGG---EEEEEEEES-SS- CS
   PF02800.15   1 LaplakvlndkfgiekglmttvhaytadQklvDgps.kdlrraraaaeniiptstgaakavgkVlpelkgkltgmAlrVPtpdv 83 
                  Lap +k++nd+fgie++lmttvha+ta+Qk+vDg+s kd+r++raaa niip+stgaakav+kV+pelkgkltgmA+rVPt+dv
  MMETSP1325-20131115|11096_1 116 LAPAVKAINDEFGIEEALMTTVHAMTATQKVVDGASkKDWRGGRAAAANIIPSSTGAAKAVTKVIPELKGKLTGMAFRVPTTDV 199
                  89********************************************************************************98 PP

>> PF00044.19  Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.0   0.0   3.5e-41   2.4e-37      41     151 .]       2     111 ..       1     111 [. 0.99
   2 ?   -1.8   0.0      0.35   2.4e+03     108     124 ..     138     154 ..     120     179 .. 0.65

  Alignments for each domain:
  == domain 1    score: 128.0 bits;  conditional E-value: 3.5e-41
                  HHHHH--S-----SS-EEE---EEEETTEEEEEE--SSGGGS-GGG----EEEE------SHHHHCHHHH----EEEESS--SS..SEB------GGG--TTTSEEE---H CS
   PF00044.19  41 ayllkydsvhgrfkgeveveeeklivngkkikvlaerdpeelpwkelgvdlVvesTGvftskekaekhlkagakkVvisapakdeaaktivvgvNeeeydpeekivsnaSC 151
                  ay++kyd++hgr++g+vev++++l+v+gk i++ ++r+p+e+p+++ g+d+V+esTG+f ++e+ + hl+aga+k+v+sapakd+  +tiv+gvN+++ydp+ k vs+aSC
  MMETSP1325-20131115|11096_1   2 AYQFKYDTIHGRYDGTVEVDGDTLVVDGKIISLSHTRNPSEIPFAQFGADYVCESTGAFLTSESIQPHLSAGARKIVFSAPAKDD-SPTIVMGVNQDSYDPAWKAVSCASC 111
                  899*********************************************************************************7.************************* PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.35
                  HHH----EEEESS--SS CS
   PF00044.19 108 hlkagakkVvisapakd 124
                  h     +kVv +a +kd
  MMETSP1325-20131115|11096_1 138 HAMTATQKVVDGASKKD 154
                  44444455555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 1019.73
//
Query:       MMETSP1325-20131115|11104_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        83  (0.0060708); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 324.21
//
Query:       MMETSP1325-20131115|11103_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 592.31
//
Query:       MMETSP1325-20131115|11105_1  [L=201]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-06   25.1   0.0    1.2e-05   24.7   0.0    1.1  1  PF00685.22 Sulfotransferase domain
  ------ inclusion threshold ------
      0.021   14.1   0.0      0.029   13.7   0.0    1.1  1  PF09037.5  Stf0 sulphotransferase


Domain annotation for each model (and alignments):
>> PF00685.22  Sulfotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   1.7e-09   1.2e-05     137     234 ..      10     105 ..       4     113 .. 0.82

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 1.7e-09
                  HHHHHHHHH.HHHCCH-HHHHHHHHHHTCCCCCEEEEEHHHHHH-HHHHHHHHHHHTT--....HHHHHHHTCHHHHHC-CCCSSTCCHS-SSEE---TTGG CS
   PF00685.22 137 feeffdlflegrvvcgsyfdhveewlklrkkgnvlflrYEdlkkdpakeikeiaeFlGip....lekivkhlsfenmksnpvsnksklsekffrkgqvgdWk 234
                  +e++ d fl+ r ++ ++++ +    k+    ++l +rYEdl   p++++ ++a+F Gi     + ++++ ++   ++sn+ ++      + +++ +vg Wk
  MMETSP1325-20131115|11105_1  10 LEDAADYFLSYRSLMRHWANVIGPETKSGRGLRMLEVRYEDLVCTPKSVADQLADFVGIGrhtaMHTHHESARVAMTSSNEQVR------RPVYQSSVGRWK 105
                  57788889999999999999999999999999****************************777777777777777777777666......556666666666 PP

>> PF09037.5  Stf0 sulphotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.2e-06     0.029     186     241 ..      39      94 ..       6      98 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.2e-06
                  TT---EEEEHHHHHHHHHHH---HHHH----GGGS-..-------------HHHHH CS
    PF09037.5 186 egieplritYeeLaanpqavvsavleaLgldpelakevkpslekladerseeWveR 241
                  +g+  l++ Ye+L+ +p+ v +++++++g+  ++a +++ + +++a + s+e v+R
  MMETSP1325-20131115|11105_1  39 RGLRMLEVRYEDLVCTPKSVADQLADFVGIGRHTAMHTHHESARVAMTSSNEQVRR 94 
                  57999*******************************************99999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 983.00
//
Query:       MMETSP1325-20131115|11110_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|11114_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|11112_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.83    8.6   9.6       0.89    8.5   6.7    1.1  1  PF13203.1 Putative metallopeptidase domain


Domain annotation for each model (and alignments):
>> PF13203.1  Putative metallopeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   6.7   6.5e-05      0.89     151     223 ..      81     151 ..      31     156 .] 0.45

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 6.5e-05
    PF13203.1 151 dsstdggdgsgesegqgeqdskknrkdapekakvralakgesadlaespegksapeaeaeearewrerlaral 223
                  + s  g++g++ ++ +g+ ++ +n + +  k+k  +++kg+ a+ ++ ++g++a  ae++++++ +++ ++++
  MMETSP1325-20131115|11112_1  81 AVSLVGAEGESVGRTNGRTNGRTNASAK-AKGKGKGKGKGKGAAKKD-TSGAKARRAEQKQQQQQQQQQQQQQ 151
                  3334444455445555555555554444.233333333333333222.2333333333333322222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1909  (0.139628); expected 273.4 (0.02)
Passed bias filter:                      634  (0.0463721); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 762.92
//
Query:       MMETSP1325-20131115|11122_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.08   12.7   0.0       0.15   11.8   0.0    1.5  1  PF10609.4 ParA/MinD ATPase like


Domain annotation for each model (and alignments):
>> PF10609.4  ParA/MinD ATPase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.1e-05      0.15       2      44 ..      52      96 ..      51     106 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.1e-05
                 S-EEEE-------HHHHHHHHH..-----EEEE-CCC--HHHHHH CS
    PF10609.4  2 DyLliDlPPGtgDehlslvqkl..pldgavivttpqevaladvrk 44
                 D+L+ DlP Gt D  l+  +    + +ga +vt   +  ++dv k
  MMETSP1325-20131115|11122_1 52 DVLVEDLPDGTTDNVLNFGELNleHDTGAKVVTFSLRNRTDDVVK 96
                 99***************9886534477999999887777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 591.75
//
Query:       MMETSP1325-20131115|11117_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-22   78.7   0.0    1.9e-22   78.4   0.0    1.1  1  PF01248.21 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family


Domain annotation for each model (and alignments):
>> PF01248.21  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4   0.0   1.4e-26   1.9e-22       2      94 ..      13     112 ..      12     113 .. 0.97

  Alignments for each domain:
  == domain 1    score: 78.4 bits;  conditional E-value: 1.4e-26
                  HHHHHHHHHHHHTEEE---HHHHHHHHH-TECEEEEETTTSSGGHHCHHHHHHH.........HTTEEEEEESTTTTHHHHHHHTST-SEEEECE-TTCTTH CS
   PF01248.21   2 aleeklkkalktgklvlGlkevtkalergeaklviiAedvepeekkkllealck.........ekevpyvkvkskkeLGelvgkkrpvsalaikdegdskdl 94 
                  ++++ l++++k+gk+ lG+k ++k+l++g+ klv+i+++++p +k++ +e++++         +++v+++ +++  +LG+++gk ++v +++++d+gds++l
  MMETSP1325-20131115|11117_1  13 NINSRLQLVMKSGKVELGYKSTLKTLRQGKSKLVLISNNTPPLRKSE-IEYYAMlannnksgsKTQVHHYAGTN-SDLGTACGKYFRVGVASVVDPGDSDIL 112
                  7899*******************************************.*****9999**99999**********.************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      331  (0.0242101); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|11123_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        84  (0.00614394); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.55
# Mc/sec: 143.78
//
Query:       MMETSP1325-20131115|11124_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.041   13.9   0.6       0.05   13.6   0.4    1.1  1  PF08910.5 C2 domain of Aida


Domain annotation for each model (and alignments):
>> PF08910.5  C2 domain of Aida
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.4   3.6e-06      0.05      26      71 ..      24      66 ..      15      74 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 3.6e-06
    PF08910.5 26 deyqilarqlqkeasaqdekeftedqkkligkiatcldlrsaalqs 71
                 ++ q la++l+ e++a  + +      ++ig+ a cl++ s++ + 
  MMETSP1325-20131115|11124_1 24 KKRQQLAKKLKAENAAAAKAK---MDXNVIGRAAACLEMTSNSARL 66
                 567889999999988883333...34679***********988655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1147  (0.0838941); expected 273.4 (0.02)
Passed bias filter:                      751  (0.0549298); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.47s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 331.13
//
Query:       MMETSP1325-20131115|11118_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-51  173.8   0.2    2.2e-51  173.3   0.0    1.3  2  PF00071.17 Ras family
    1.2e-19   70.8   0.1    3.3e-19   69.4   0.0    1.7  2  PF08477.8  Miro-like protein
    5.1e-13   48.5   0.0    6.4e-13   48.2   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
    1.1e-05   24.6   0.0    1.4e-05   24.2   0.0    1.2  1  PF04670.7  Gtr1/RagA G protein conserved region
    3.9e-05   23.0   0.0    5.9e-05   22.4   0.0    1.4  1  PF00009.22 Elongation factor Tu GTP binding domain
    0.00034   19.7   0.0    0.00067   18.8   0.0    1.4  1  PF09439.5  Signal recognition particle receptor beta subunit
    0.00048   19.9   0.0     0.0011   18.8   0.0    1.6  1  PF01926.18 50S ribosome-binding GTPase
     0.0027   16.8   0.0      0.051   12.6   0.0    2.1  2  PF02421.13 Ferrous iron transport protein B
  ------ inclusion threshold ------
      0.023   14.4   0.1       0.12   12.1   0.0    2.1  1  PF13173.1  AAA domain
      0.037   13.4   0.0      0.049   13.0   0.0    1.1  1  PF03029.12 Conserved hypothetical ATP binding protein


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.3   0.0   1.6e-54   2.2e-51       1     160 [.       9     169 ..       9     171 .. 0.97
   2 ?   -3.8   0.0       4.6   6.3e+03       6      17 ..     193     204 ..     193     206 .. 0.81

  Alignments for each domain:
  == domain 1    score: 173.3 bits;  conditional E-value: 1.6e-54
                  EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEET.TEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHSTTTSSEEEE---TTGGGG-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHH CS
   PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievd.gkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellrei 160
                  K+vl+G++ vGKts+llr+v+d+++++++sT+ +  + k+++   +k v+l+iwDTAGqe+f++l + yyrda+g+llvydit++esf++v+kwv+e+++++ ++++iv+ GnK Dl+++rav+++++ ++a+++g++++ tSAk+n++++e f el++++
  MMETSP1325-20131115|11118_1   9 KVVLLGEGRVGKTSILLRYVRDEYNDRQQSTLQASYLDKRVSGPaNKPVQLSIWDTAGQERFHALGPIYYRDADGALLVYDITDHESFTKVRKWVRELRSIVGNDIAIVIAGNKYDLAKNRAVQEADALAYAESVGAAHIYTSAKQNKGLDESFGELTTRM 169
                  9*******************************9999999998877999************************************************************************************************************99877 PP

  == domain 2    score: -3.8 bits;  conditional E-value: 4.6
                  -------HHHHH CS
   PF00071.17   6 GdsavGKtslll 17 
                  G +  GK++l++
  MMETSP1325-20131115|11118_1 193 GRGRGGKSALVI 204
                  667789***997 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   0.0   2.4e-22   3.3e-19       1     119 []       9     124 ..       9     124 .. 0.78
   2 ?   -2.1   0.1       3.3   4.5e+03       6      16 ..     193     203 ..     190     207 .. 0.82

  Alignments for each domain:
  == domain 1    score: 69.4 bits;  conditional E-value: 2.4e-22
    PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtel...lelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                  kvv++G+ +vGK+s+l ++v++e+     ++ + ++ + +  + v + +++   l++wd++g+e++++  ++  ++ad++llvyd+td+es+ +v++ + +l+++     + i++++ gnk D
  MMETSP1325-20131115|11118_1   9 KVVLLGEGRVGKTSILLRYVRDEYN--DRQQSTLQASYLD--KRVSGPANKpvqLSIWDTAGQERFHALGPIYYRDADGALLVYDITDHESFTKVRKWVRELRSIV---GNdIAIVIAGNKYD 124
                  8************************..3333333333333..333333333668**************87777*********************966666666666...445*********98 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 3.3
    PF08477.8   6 GdkgvGKssll 16 
                  G  + GKs+l+
  MMETSP1325-20131115|11118_1 193 GRGRGGKSALV 203
                  66778999997 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   0.0   4.7e-16   6.4e-13      12     172 ..       5     166 ..       1     169 [. 0.82

  Alignments for each domain:
  == domain 1    score: 48.2 bits;  conditional E-value: 4.7e-16
                  TSEEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S-EE..EEEEE...TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHHTTTTTST.SSSEEEEEEBTTTTB--HHHHHHHH CS
   PF00025.16  12 kkelrilllGLDnaGKtTilkklkleelvt.tvPTigfnv..eelei...knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewls 172
                  +  ++++llG    GKt il ++  +e ++ ++ T+      ++++    k +++++wD  Gqe+   l   Y+++ d+ + v D +d+e +++ ++ +++l +    +++a+++ +NK Dl++    +e  +l   e++  + +   + +sa +++gl+e++  l+
  MMETSP1325-20131115|11118_1   5 TARFKVVLLGEGRVGKTSILLRYVRDEYNDrQQSTLQASYldKRVSGpanKPVQLSIWDTAGQERFHALGPIYYRDADGALLVYDITDHESFTKVRKWVRELRSIV-GNDIAIVIAGNKYDLAKNRAVQEADALAYAESVG-AAH---IYTSAKQNKGLDESFGELT 166
                  6689*******************99998764667776654113343255599*****************************************9999888876554.468999**********999999988888888887.333...3588999999999988776 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0     1e-08   1.4e-05       1     123 [.       9     125 ..       9     152 .. 0.74

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 1e-08
    PF04670.7   1 klLLmGksgsGKtSmr.siiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqy.speakvfvlihKmDl 123
                  k++L+G+++ GKtS+    + ++y  r+  +L+a+   ++ +   ++ ++l++wD+ Gqe+f +          +++ +  + V Di+  + +e+++k ++ ++ l+ +   ++ + +  +K Dl
  MMETSP1325-20131115|11118_1   9 KVVLLGEGRVGKTSILlRYVRDEYNDRQQSTLQASYLDKRVSGPANKPVQLSIWDTAGQERFHAL-----GPIYYRDADGALLVYDIT--D-HESFTKVRKWVRELRSIvGNDIAIVIAGNKYDL 125
                  89************8537899*************99777777778999***********999876.....455666666666677777..3.455555555555555541344555555555555 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   4.3e-08   5.9e-05      66     177 ..      53     160 ..       9     180 .. 0.77

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 4.3e-08
                  .ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-....S-HHHHHHHHHHHHTT--EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHH CS
   PF00009.22  66 etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG....vepqTeevlrlakklgvkiivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegida 177
                   +k  ++++ Dt G + F +      r +Dga+lv d ++        +  + lr +   ++ i+++ NK D++++++ +  + l   + e++       +  + +Sa++++g+d+
  MMETSP1325-20131115|11118_1  53 ANKPVQLSIWDTAGQERFHALGPIYYRDADGALLVYDITDHesftKVRKWVRELRSIVGNDIAIVIAGNKYDLAKNRAVQEADALA--YAESV------GAAHIYTSAKQNKGLDE 160
                  67888999*******************************887666334444556777889999***********998877777777..22233......23468888888888875 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   4.9e-07   0.00067       5     129 ..       9     130 ..       5     137 .. 0.82

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 4.9e-07
                  EEEEE--TT---HHHHHHHHHSS-------S.S-EEETT-......-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT--- CS
    PF09439.5   5 avllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv...ksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflaks 129
                  +v+l+G    GKTs++ r   d++++ + S  ++s  +k     ++k  +l + D  G+e++    l   ++ + + g + v D t d    ++v  ++ e+ +i+    n + i+iA nK +l+  + 
  MMETSP1325-20131115|11118_1   9 KVVLLGEGRVGKTSILLRYVRDEYNDRQQSTlQASYLDKRvsgPANKPVQLSIWDTAGQERFHA--LGP-IYYRDADGALLVYDIT-DHESFTKVRKWVRELRSIVG---NDIAIVIAGNKYDLAKNRA 130
                  799**********************99999876665554445556788889999******9975..344.4677788888888876.78899999999999999988...9***********9987765 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0     8e-07    0.0011       1     111 [.       9     119 ..       9     128 .. 0.65

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 8e-07
                  EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESE..EEE....ETTE...EEEEE---SSSHHHHHHHHHHHHHHHHHH..CTSSEEEEEEE.TTS.HHHHHHHHHHHHHH....TCCCEEEE CS
   PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrdite..nev....kkek...iilvDtPGiiegasedkeiegikkylekv..eradvlllvvd.asa.vlkeadkellnele....akkplilv 111
                  +v+++G+  vGK++++ + +   + + +d ++ T++  +  ++v    +  k   + ++Dt+G            ++  +l  +  ++ad++llv d +++    +++++ ++el+    +++ ++++
  MMETSP1325-20131115|11118_1   9 KVVLLGEGRVGKTSILLRYV---RDEYNDRQQSTLQASYldKRVsgpaN--KpvqLSIWDTAGQE----------RFH-ALGPIyyRDADGALLVYDiTDHeSF-TKVRKWVRELRsivgNDIAIVIA 119
                  699*****************...45789*********554533355432..243357******32..........222.222222499999*****94444422.23444446663444455555555 PP

>> PF02421.13  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.066        90       2      17 ..       9      24 ..       8      31 .. 0.88
   2 !   12.6   0.0   3.7e-05     0.051     105     167 ..     113     176 ..      97     187 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.066
                 EEEEE--TT---HHHH CS
   PF02421.13  2 tvalvGnpnvGKttlf 17
                 +v+l+G+  vGKt+++
  MMETSP1325-20131115|11118_1  9 KVVLLGEGRVGKTSIL 24
                 799**********997 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 3.7e-05
                  T-SEEEEEETHHHHHC--.-EB-HHHHHHH----EEEEBCCGTB--HHHHHHHHHHCTCG-XXX CS
   PF02421.13 105 gvpvvvalnmiDeaekkg.ikidlkkLselLgvpvvktvarkkkgieelleaiievaekeekek 167
                  ++ +v+a n++D a+++  ++ d+ + +e++g   + t+a+++kg++e + ++++ ++++++e+
  MMETSP1325-20131115|11118_1 113 DIAIVIAGNKYDLAKNRAvQEADALAYAESVGAAHIYTSAKQNKGLDESFGELTTRMTTRRREQ 176
                  6789**********9987257899999*********************9999877776665554 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   8.9e-05      0.12       4      42 ..       9      49 ..       6     135 .. 0.63

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 8.9e-05
    PF13173.1  4 ilvitGpRrvGKttllkqlakell..keesilyinlddeel 42
                  +v+ G  rvGKt +l +++++++  +++s+l  +  d++ 
  MMETSP1325-20131115|11118_1  9 KVVLLGEGRVGKTSILLRYVRDEYndRQQSTLQASYLDKRV 49
                 5899999*****************76566666666555555 PP

>> PF03029.12  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.6e-05     0.049      91     210 ..      55     167 ..      34     184 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 3.6e-05
   PF03029.12  91 d..dyvlfDtPGQielftlseslakiveaLes.efalvvvylvDsqrltdptkfisgllsalsimlklelPhvvalnkfDllkeklekeleffedvealqallekdlkklaesiaelleefal 210
                  +  ++ + Dt GQ ++  l +            ++al v  + D +  t++ k++ +    l  ++  ++  v+a nk Dl+k+++ +e + +   e++ a+   + +k+++ + e++ e + 
  MMETSP1325-20131115|11118_1  55 KpvQLSIWDTAGQERFHALGPIYY------RDaDGALLVYDITDHESFTKVRKWVRE----LRSIVGNDIAIVIAGNKYDLAKNRAVQEADALAYAESVGAAHIYTSAKQNKGLDESFGELTT 167
                  345899**********99999988......44599**********************....9999****************997765555555555556665555566666666666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       344  (0.0251609); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 1140.87
//
Query:       MMETSP1325-20131115|11131_1  [L=258]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-08   33.0   9.7    2.3e-08   33.0   6.8    1.5  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.19    9.9  13.3       0.64    8.2   9.4    1.8  1  PF13347.1  MFS/sugar transport protein


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   6.8   3.4e-12   2.3e-08     206     351 ..      29     175 ..       5     178 .. 0.70

  Alignments for each domain:
  == domain 1    score: 33.0 bits;  conditional E-value: 3.4e-12
   PF07690.11 206 ppvlw.illialllfffvfsglltllplylqevlglspglllaglllgllaligaigalllgrlsdrlgr..rrrlllallllllaalglallaft..ssavwlllvlvliGfglglvfptllalasdlappeerGtasglfntagslgga 351
                   +v w ++l   ++f+ v  ++  ++  y+ +++ l+  l++ag++ +l++l++++++ ++g+lsd++++   +r  l++ ++ l++ g++l+ f+  ++   ++ +l+++++g+    ++ + ++  + p +++G++sg++++ g++g++
  MMETSP1325-20131115|11131_1  29 EVVTWvLALQYGCCFG-VELTVNNMMAGYFTTRFELD--LVTAGTIASLFGLMNIFARAIGGFLSDKMNKkyGFRGRLGVQFGCLMYEGVMLFIFSrmNTIEGAIPMLIMFSIGVQASEGSTFGVVPYVKP-SATGSVSGVVGAGGNIGAV 175
                  3444533333444443.4444777777899*******..****************************8885533333333333333334444444443444444448888999888888888888888886.99**************986 PP

>> PF13347.1  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   9.4   9.4e-05      0.64      21     124 ..      50     153 ..      29     213 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 9.4e-05
    PF13347.1  21 ityllyFytdvlglsaaavgllmlvsriwdafiDpavGnliDrtrsrwG.kfrpwlligavplailfillFsthpqnlsatakllyafitylllvlaytvvnipy 124
                    +++ ++t+ + l+ + +g++ ++  ++++f+  + G+l+D+ ++++G + r  + +g +++  +++++Fs  +  +++   +l +f + +  +   t+ ++py
  MMETSP1325-20131115|11131_1  50 NNMMAGYFTTRFELDLVTAGTIASLFGLMNIFARAIGGFLSDKMNKKYGfRGRLGVQFGCLMYEGVMLFIFSR-MNTIEGAIPMLIMFSIGVQASEGSTFGVVPY 153
                  346677999999*************************************88899999******9999999977.6577777777776665555566666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1212.27
//
Query:       MMETSP1325-20131115|11138_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|11139_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-96  323.3   0.0    1.3e-96  323.1   0.0    1.0  1  PF04733.9  Coatomer epsilon subunit
      2e-10   40.2   3.7     0.0001   22.4   0.0    6.0  6  PF13428.1  Tetratricopeptide repeat
    1.2e-09   38.4   0.0      2e-05   24.9   0.0    4.3  5  PF13432.1  Tetratricopeptide repeat
    8.8e-09   34.7   0.2    7.5e-05   22.1   0.0    4.0  4  PF13414.1  TPR repeat
    2.5e-06   26.7   0.0      0.096   12.2   0.0    5.3  6  PF00515.23 Tetratricopeptide repeat
    2.6e-06   26.8   1.2      0.095   12.5   0.0    5.1  5  PF07719.12 Tetratricopeptide repeat
    5.3e-06   26.1   1.6     0.0063   16.3   0.0    4.1  4  PF13424.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.4   2.0        6.7    7.0   0.0    4.4  5  PF13431.1  Tetratricopeptide repeat
      0.018   15.3   3.5        2.4    8.6   0.1    4.2  5  PF13174.1  Tetratricopeptide repeat
      0.041   14.0   0.0         22    5.5   0.0    3.5  3  PF13812.1  Pentatricopeptide repeat domain


Domain annotation for each model (and alignments):
>> PF04733.9  Coatomer epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.1   0.0  9.3e-100   1.3e-96       2     289 ..       5     295 ..       4     296 .. 0.98

  Alignments for each domain:
  == domain 1    score: 323.1 bits;  conditional E-value: 9.3e-100
                  X-TTHHHHHHHH---HHHHHHHHH.S---SHHHHHHHHHHHHHHHHHTT----HHHHS-TTS..-HHHHHHHHHHHHHH-STTHHHHHHHHHHHHHS----S-HHHHHHHHHHHHHTT-HHHHHHHHT----HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHS---HHHH---HHHHHH---HHHH---HHHHHHH----HHHHHHHHHHHHH----HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHH CS
    PF04733.9   2 sdeLfdvrnefYlGaYqkainead.vaslseeekeerdvylyrsylAlgsaqiviseIkesa..atelqAvrllaeylnspsrkeeilaelkeeladseiesnevlrllaaivflkegdfddalkllkksenLeavAlkvqillklhrvdlAekelkkmqdidedatltQLAqawvklavggekiqdAyyifqelsekykstplllngkAvvslllgryeeAeslLkeaLdkdakdeetLiNlvvaaqhlgkdaevsernlsqlklshpehklvkdlnekeaeFdrlvlqf 289
                  +d L+ +r  f+lG+Yq+a+ e   ++ l e    e + ++yrsy+A+g+  iv++eIk++   + +lqAv+lla yl+ ps++e +l  l e+lad +   n  l+l+aa+++++e++ +dalk++++++++e  Al++qi+lk++r dlA k+++ mq+ dedatltQLA aw  la+gg+k+q+A +i++el +k+ +t+ llng Av+++++g+++eAe+ L +aL++ ++d++tL+Nl+ + qhl k++e ++r+++ql++  p+ ++v++ln  e  Fdr++  +
  MMETSP1325-20131115|11139_1   5 PDDLYTLRTLFWLGNYQRAVTEGSgLTRLPEALRIEVKEFVYRSYIAMGQHSIVLDEIKDAPgtPVSLQAVKLLARYLSDPSATELVLMTLGEWLADPSSAGNPSLQLIAALIYMHENNIKDALKAIRHGTTMEQLALTIQIYLKMDRPDLATKQVRLMQQADEDATLTQLALAWTYLANGGKKLQEAAFIYEELIDKFGPTTSLLNGVAVANMHMGKFDEAEKTLASALQQGPNDPDTLVNLISCYQHLSKPTELIQRHINQLRTGAPNNPMVQQLNTVEGAFDRVADTY 295
                  89********************9989999999999***********************9987535689***************************************************************************************************************************************************************************************************************************9877 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.5     2e+03       9      22 ..      12      25 ..       8      37 .. 0.84
   2 ?    1.1   0.0      0.55   7.5e+02      19      37 ..      73      90 ..      47      98 .. 0.77
   3 ?    3.0   0.0      0.14   1.9e+02       2      25 ..     109     132 ..     108     135 .. 0.87
   4 ?    6.1   0.3     0.013        18       3      42 ..     139     178 ..     137     180 .. 0.87
   5 ?    5.6   0.1      0.02        27       3      31 ..     173     203 ..     171     214 .. 0.84
   6 !   22.4   0.0   7.6e-08    0.0001       5      42 ..     211     248 ..     207     250 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 1.5
    PF13428.1  9 rallalGdpdeAia 22
                 r l+ lG++++A+ 
  MMETSP1325-20131115|11139_1 12 RTLFWLGNYQRAVT 25
                 678899*****985 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.55
    PF13428.1 19 eAiallrralalaPddaea 37
                 +A++ll r+l+ +P+  e+
  MMETSP1325-20131115|11139_1 73 QAVKLLARYLS-DPSATEL 90
                 58899999888.6655544 PP

  == domain 3    score: 3.0 bits;  conditional E-value: 0.14
    PF13428.1   2 eallalarallalGdpdeAiallr 25 
                   ++l  a ++++ ++ ++A+++ r
  MMETSP1325-20131115|11139_1 109 SLQLIAALIYMHENNIKDALKAIR 132
                  578889999***********9976 PP

  == domain 4    score: 6.1 bits;  conditional E-value: 0.013
    PF13428.1   3 allalarallalGdpdeAiallrralalaPddaealllLa 42 
                  +l++  +++l + +pd A ++ r + +++ d    +l+La
  MMETSP1325-20131115|11139_1 139 QLALTIQIYLKMDRPDLATKQVRLMQQADEDATLTQLALA 178
                  5566689******************999999999999998 PP

  == domain 5    score: 5.6 bits;  conditional E-value: 0.02
    PF13428.1   3 allalarallalG..dpdeAiallrralala 31 
                  ++lala+ +la+G   ++eA+  +++++ ++
  MMETSP1325-20131115|11139_1 173 TQLALAWTYLANGgkKLQEAAFIYEELIDKF 203
                  5899*******98778**********99885 PP

  == domain 6    score: 22.4 bits;  conditional E-value: 7.6e-08
    PF13428.1   5 lalarallalGdpdeAiallrralalaPddaealllLa 42 
                     a a +++G +deA++ l  al+++P+d++ l +L 
  MMETSP1325-20131115|11139_1 211 NGVAVANMHMGKFDEAEKTLASALQQGPNDPDTLVNLI 248
                  56788999************************998875 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0        10   1.4e+04      11      16 ..      18      23 ..      17      25 .. 0.67
   2 ?    5.4   0.0      0.02        28      28      56 ..     105     133 ..      73     141 .. 0.86
   3 ?    0.9   0.0       0.5   6.9e+02      37      63 ..     143     169 ..     136     171 .. 0.80
   4 !   24.9   0.0   1.5e-08     2e-05       2      65 .]     176     241 ..     175     241 .. 0.90
   5 !   18.8   0.0   1.3e-06    0.0018      10      65 .]     220     276 ..     212     276 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 10
    PF13432.1 11 GdydeA 16
                 G+y++A
  MMETSP1325-20131115|11139_1 18 GNYQRA 23
                 777777 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.02
    PF13432.1  28 PeaaeallllaeallrlgrldeAaallra 56 
                   +++  +l  a ++++ ++ ++A++++r+
  MMETSP1325-20131115|11139_1 105 AGNPSLQLIAALIYMHENNIKDALKAIRH 133
                  458889999***************99886 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.5
    PF13432.1  37 laeallrlgrldeAaallraalalaPd 63 
                    +++l++ r+d A +  r +++++ d
  MMETSP1325-20131115|11139_1 143 TIQIYLKMDRPDLATKQVRLMQQADED 169
                  56899**********999999777665 PP

  == domain 4    score: 24.9 bits;  conditional E-value: 1.5e-08
    PF13432.1   2 alArallraGd..ydeAlaaleaalala.PeaaeallllaeallrlgrldeAaallraalalaPddp 65 
                  alA  +l++G   ++eA+ ++e++++++ P     l + a+a +++g++deA++ l++al+ +P+dp
  MMETSP1325-20131115|11139_1 176 ALAWTYLANGGkkLQEAAFIYEELIDKFgP-TTSLLNGVAVANMHMGKFDEAEKTLASALQQGPNDP 241
                  5666666666556*****************.**********************************98 PP

  == domain 5    score: 18.8 bits;  conditional E-value: 1.3e-06
    PF13432.1  10 aGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAa.allraalalaPddp 65 
                   G++deA++ l  al + P +++ l +l  ++ +l+++ e + + ++++  +aP++p
  MMETSP1325-20131115|11139_1 220 MGKFDEAEKTLASALQQGPNDPDTLVNLISCYQHLSKPTELIqRHINQLRTGAPNNP 276
                  59***********************************99999888888888888876 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.62   8.4e+02      13      24 ..      14      25 ..      12      26 .. 0.82
   2 ?    3.6   0.8     0.034        46       9      32 ..     114     137 ..     107     205 .. 0.48
   3 !   17.9   0.2   1.2e-06    0.0016      13      66 ..     183     235 ..     172     235 .. 0.88
   4 !   22.1   0.0   5.5e-08   7.5e-05      10      56 ..     214     259 ..     205     269 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.5 bits;  conditional E-value: 0.62
    PF13414.1 13 lfkegdydeAie 24
                 lf++g+y+ A+ 
  MMETSP1325-20131115|11139_1 14 LFWLGNYQRAVT 25
                 899999999975 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.034
    PF13414.1   9 lGnalfkegdydeAieayekAlel 32 
                  ++  +++e++ ++A++a ++++ +
  MMETSP1325-20131115|11139_1 114 AALIYMHENNIKDALKAIRHGTTM 137
                  566666777777777666666544 PP

  == domain 3    score: 17.9 bits;  conditional E-value: 1.2e-06
    PF13414.1  13 lfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAle 66 
                  +   ++++eA   ye+ ++    + +l+++ A a +++g +++eA + +  Al+
  MMETSP1325-20131115|11139_1 183 ANGGKKLQEAAFIYEELIDKFGPTTSLLNGVAVANMHMG-KFDEAEKTLASALQ 235
                  344579*************9999****************.6********99997 PP

  == domain 4    score: 22.1 bits;  conditional E-value: 5.5e-08
    PF13414.1  10 GnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyee 56 
                  + a +++g++deA++ +  Al+  pn+++ + nl  +y++l k + e
  MMETSP1325-20131115|11139_1 214 AVANMHMGKFDEAEKTLASALQQGPNDPDTLVNLISCYQHLSK-PTE 259
                  5667899********************************9985.444 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.18   2.4e+02      11      21 ..      14      24 ..      12      25 .. 0.85
   2 ?    3.6   0.0     0.036        49       8      23 ..     115     130 ..     115     133 .. 0.91
   3 ?    0.3   0.0      0.38   5.2e+02       9      20 ..     145     156 ..     144     158 .. 0.88
   4 ?   -3.3   0.1       5.5   7.6e+03       1       9 [.     176     184 ..     176     184 .. 0.78
   5 !   12.2   0.0     7e-05     0.096       4      34 .]     210     240 ..     208     240 .. 0.89
   6 ?    0.5   0.0      0.33   4.5e+02       2      18 ..     242     258 ..     241     259 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.18
                 HHHTT-HHHHH CS
   PF00515.23 11 ylklgkydeAl 21
                 ++ lg+y+ A+
  MMETSP1325-20131115|11139_1 14 LFWLGNYQRAV 24
                 7899****996 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.036
                  HHHHHHTT-HHHHHHH CS
   PF00515.23   8 GnaylklgkydeAley 23 
                  +++y++ ++ ++Al++
  MMETSP1325-20131115|11139_1 115 ALIYMHENNIKDALKA 130
                  689***********97 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.38
                  HHHHHTT-HHHH CS
   PF00515.23   9 naylklgkydeA 20 
                  ++ylk+ ++d A
  MMETSP1325-20131115|11139_1 145 QIYLKMDRPDLA 156
                  59********98 PP

  == domain 4    score: -3.3 bits;  conditional E-value: 5.5
                  HHHHHHHHH CS
   PF00515.23   1 akalynlGn 9  
                  a a+  l+n
  MMETSP1325-20131115|11139_1 176 ALAWTYLAN 184
                  678999987 PP

  == domain 5    score: 12.2 bits;  conditional E-value: 7e-05
                  HHHHHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
   PF00515.23   4 lynlGnaylklgkydeAleyyekALelnPnn 34 
                  l++ ++a +++gk+deA++    AL+  Pn+
  MMETSP1325-20131115|11139_1 210 LNGVAVANMHMGKFDEAEKTLASALQQGPND 240
                  67789999****************9998886 PP

  == domain 6    score: 0.5 bits;  conditional E-value: 0.33
                  HHHHHHHHHHHHTT-HH CS
   PF00515.23   2 kalynlGnaylklgkyd 18 
                  ++l nl  +y++l k+ 
  MMETSP1325-20131115|11139_1 242 DTLVNLISCYQHLSKPT 258
                  7899********99875 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.16   2.2e+02      10      21 ..      13      24 ..      12      26 .. 0.82
   2 ?    5.1   0.0     0.017        23       8      25 ..     115     132 ..     110     135 .. 0.90
   3 ?   -2.1   0.0       3.3   4.6e+03       9      22 ..     145     158 ..     145     161 .. 0.83
   4 ?    0.4   0.4      0.54   7.3e+02      15      29 ..     187     201 ..     174     203 .. 0.77
   5 !   12.5   0.0   6.9e-05     0.095       4      34 .]     210     240 ..     208     240 .. 0.91

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.16
                 HHHHTT-HHHHH CS
   PF07719.12 10 ayyklgdyeeAl 21
                  ++ lg+y++A+
  MMETSP1325-20131115|11139_1 13 TLFWLGNYQRAV 24
                 57889****996 PP

  == domain 2    score: 5.1 bits;  conditional E-value: 0.017
                  HHHHHHTT-HHHHHHHHH CS
   PF07719.12   8 GlayyklgdyeeAleafe 25 
                  +l+y++ ++ ++Al+a +
  MMETSP1325-20131115|11139_1 115 ALIYMHENNIKDALKAIR 132
                  89*************976 PP

  == domain 3    score: -2.1 bits;  conditional E-value: 3.3
                  HHHHHTT-HHHHHH CS
   PF07719.12   9 layyklgdyeeAle 22 
                  ++y+k+++++ A +
  MMETSP1325-20131115|11139_1 145 QIYLKMDRPDLATK 158
                  589****9998865 PP

  == domain 4    score: 0.4 bits;  conditional E-value: 0.54
                  T-HHHHHHHHHHHHH CS
   PF07719.12  15 gdyeeAleafekAle 29 
                  ++++eA+  +e+ + 
  MMETSP1325-20131115|11139_1 187 KKLQEAAFIYEELID 201
                  467899999998875 PP

  == domain 5    score: 12.5 bits;  conditional E-value: 6.9e-05
                  HHHHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
   PF07719.12   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                  l+  + a +++g+++eA++ +  Al+  Pn+
  MMETSP1325-20131115|11139_1 210 LNGVAVANMHMGKFDEAEKTLASALQQGPND 240
                  6778999*******************99996 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.68   9.3e+02      47      58 ..      12      23 ..       4      26 .. 0.50
   2 ?    0.9   0.0      0.28   3.8e+02      12      31 ..     115     134 ..     108     156 .. 0.81
   3 ?    3.8   0.3     0.035        48      44      74 ..     169     201 ..     143     203 .. 0.81
   4 !   16.3   0.0   4.6e-06    0.0063       6      61 ..     208     256 ..     205     263 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.68
    PF13424.1 47 ralnnlanlyla 58
                 r+l+ l+n+++a
  MMETSP1325-20131115|11139_1 12 RTLFWLGNYQRA 23
                 444444444332 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.28
    PF13424.1  12 alvlrrlgdydeAlelyeka 31 
                  al+++++ + ++Al+ +++ 
  MMETSP1325-20131115|11139_1 115 ALIYMHENNIKDALKAIRHG 134
                  68899999999999887765 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.035
    PF13424.1  44 dtaralnnlanlylalg..dydeAleylekAle 74 
                  d   + + la++yla g  +++eA   +e+ ++
  MMETSP1325-20131115|11139_1 169 DATLTQLALAWTYLANGgkKLQEAAFIYEELID 201
                  44568899*******99999********99875 PP

  == domain 4    score: 16.3 bits;  conditional E-value: 4.6e-06
    PF13424.1   6 tilnnlalvlrrlgdydeAlelyekalellrelgddhpdtaralnnlanlylalgd 61 
                  ++ln  a + +++g++deA++ +  al+    +g+++pd   +l nl  +y++l +
  MMETSP1325-20131115|11139_1 208 SLLNGVAVANMHMGKFDEAEKTLASALQ----QGPNDPD---TLVNLISCYQHLSK 256
                  689999***9*****************6....5999987...67888888887766 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.7     5e+03      20      33 ..     115     128 ..     108     129 .. 0.79
   2 ?    3.4   0.1     0.073     1e+02      18      30 ..     176     188 ..     164     193 .. 0.75
   3 ?    0.3   0.0       0.7   9.6e+02      14      34 .]     208     228 ..     195     228 .. 0.73
   4 ?    7.0   0.0    0.0049       6.7       5      30 ..     233     258 ..     230     262 .. 0.85
   5 ?   -2.9   0.0       7.6     1e+04       9      15 ..     272     278 ..     271     280 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 3.7
    PF13431.1  20 AelllnnGdleeAe 33 
                  A+++   ++ ++A+
  MMETSP1325-20131115|11139_1 115 ALIYMHENNIKDAL 128
                  57899999999997 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.073
    PF13431.1  18 nLAelllnnGdle 30 
                  +LA+++l+nG  +
  MMETSP1325-20131115|11139_1 176 ALAWTYLANGGKK 188
                  799****999543 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.7
    PF13431.1  14 daynnLAelllnnGdleeAeq 34 
                   ++n  A++    G+++eAe+
  MMETSP1325-20131115|11139_1 208 SLLNGVAVANMHMGKFDEAEK 228
                  5666778999999*****985 PP

  == domain 4    score: 7.0 bits;  conditional E-value: 0.0049
    PF13431.1   5 aleldPnnadaynnLAelllnnGdle 30 
                  al++ Pn++d + nL  +++ + ++ 
  MMETSP1325-20131115|11139_1 233 ALQQGPNDPDTLVNLISCYQHLSKPT 258
                  89999**********99999887765 PP

  == domain 5    score: -2.9 bits;  conditional E-value: 7.6
    PF13431.1   9 dPnnada 15 
                  +Pnn+++
  MMETSP1325-20131115|11139_1 272 APNNPMV 278
                  69**987 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       4.8   6.5e+03      12      20 ..      16      24 ..      12      27 .. 0.61
   2 ?   -3.3   0.0        10   1.4e+04      18      27 ..      73      82 ..      73      84 .. 0.75
   3 ?   -2.7   0.0         7   9.6e+03       5      22 ..     113     130 ..     111     132 .. 0.68
   4 ?    8.6   0.1    0.0018       2.4       4      30 ..     175     203 ..     173     204 .. 0.88
   5 ?    4.3   0.0     0.043        58      10      32 ..     217     239 ..     212     240 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 4.8
                 HHHHHHHHH CS
    PF13174.1 12 klgdtdeAl 20
                  lg++++A+
  MMETSP1325-20131115|11139_1 16 WLGNYQRAV 24
                 456777776 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 10
                 HHHHHHHHHH CS
    PF13174.1 18 eAlealerli 27
                 +A+++l r++
  MMETSP1325-20131115|11139_1 73 QAVKLLARYL 82
                 6888888876 PP

  == domain 3    score: -2.7 bits;  conditional E-value: 7
                  HHHHHHHHHHHHHHHHHH CS
    PF13174.1   5 klalsyyklgdtdeAlea 22 
                   +al+y   ++  +Al+a
  MMETSP1325-20131115|11139_1 113 IAALIYMHENNIKDALKA 130
                  577888875577777765 PP

  == domain 4    score: 8.6 bits;  conditional E-value: 0.0018
                  HHHHHHHHH.HH.HHHHHHHHHHHHHHH- CS
    PF13174.1   4 yklalsyyk.lg.dtdeAlealerlikey 30 
                  + la+ y++ +g + +eA  ++e+li+++
  MMETSP1325-20131115|11139_1 175 LALAWTYLAnGGkKLQEAAFIYEELIDKF 203
                  669*****87766999***********98 PP

  == domain 5    score: 4.3 bits;  conditional E-value: 0.043
                  HHHHHHHHHHHHHHHHHHHH-TT CS
    PF13174.1  10 yyklgdtdeAlealerlikeyPd 32 
                     +g++deA ++l   +++ P+
  MMETSP1325-20131115|11139_1 217 NMHMGKFDEAEKTLASALQQGPN 239
                  55578************999887 PP

>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       2.1   2.9e+03      14      33 ..     105     125 ..     103     125 .. 0.77
   2 ?    5.5   0.0     0.016        22       7      30 ..     143     166 ..     140     175 .. 0.90
   3 ?    4.0   0.0     0.049        68       4      26 ..     210     232 ..     207     239 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 2.1
    PF13812.1  14 sgrpea.AlalleeMeqqgvk 33 
                  +g+p +   a+l +M ++++k
  MMETSP1325-20131115|11139_1 105 AGNPSLqLIAALIYMHENNIK 125
                  677777778899999999885 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.016
    PF13812.1   7 litalaksgrpeaAlalleeMeqq 30 
                   i  ++k+ rp++A + ++ M+q+
  MMETSP1325-20131115|11139_1 143 TIQIYLKMDRPDLATKQVRLMQQA 166
                  68899****************996 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.049
    PF13812.1   4 yntlitalaksgrpeaAlallee 26 
                  +n ++ a+ ++g +++A+++l+ 
  MMETSP1325-20131115|11139_1 210 LNGVAVANMHMGKFDEAEKTLAS 232
                  67788899***********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.67u 0.43s 00:00:01.10 Elapsed: 00:00:00.57
# Mc/sec: 1235.36
//
Query:       MMETSP1325-20131115|11140_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.17   10.0   9.0       0.22    9.6   6.3    1.1  1  PF01499.11 Herpesvirus UL25 family
       0.56    8.4   3.0       0.72    8.0   2.1    1.1  1  PF10359.4  RNA pol II promoter Fmp27 protein domain
          1    9.6   4.7          1    9.6   0.8    2.1  2  PF06156.8  Protein of unknown function (DUF972)
          2    8.2   9.7        3.7    7.3   6.7    1.4  1  PF03938.9  Outer membrane protein (OmpH-like)
        2.1    8.6   6.8          4    7.7   1.5    2.5  2  PF04102.7  SlyX


Domain annotation for each model (and alignments):
>> PF01499.11  Herpesvirus UL25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.3   8.1e-05      0.22      30     104 ..      54     127 ..      40     165 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 8.1e-05
   PF01499.11  30 rerfalrlrkea.eevkleklkkralkaeLdnleaksqtrseeiearLreieaeleevadaldlletaaaaaeead 104
                   +  a++  ++  + + +++   ++l+aeLd l ++++  s+e++a+L++ +a+++e a+ +++l+++ ++     
  MMETSP1325-20131115|11140_1  54 AKVKAAESTDRSrDLESRAEHAVQLLRAELDALVQRQRPLSDELNAALEREQAAMAENARLKAALAKSYEESA--A 127
                  223333333332022233333334**************************99999999998888863333222..2 PP

>> PF10359.4  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.1   0.00026      0.72     171     270 ..      41     141 ..      38     146 .. 0.60

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00026
    PF10359.4 171 Rlkeleeqikkleeklkelel....nkddeelqkdleelekelselkerleflekeleelekeeeeseksssskkessekesesslsesaseaesaseFdNrFv 270
                  R+ +le+++++l+ k+k +e+    ++ +++ ++ ++ l  el+ l++r + l++el+   ++e+++++++   k    + ++s  +++a+ ++++++++ r++
  MMETSP1325-20131115|11140_1  41 RELQLEHEVERLKAKVKAAEStdrsRDLESRAEHAVQLLRAELDALVQRQRPLSDELNAALEREQAAMAENARLK---AALAKSYEESAAMVTAAQAHWEARYM 141
                  8899**************999554333334444555556677777777777777777766666655555544432...22222333333555555555555555 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2      0.11     3e+02      40      63 ..      44      67 ..      35      78 .. 0.64
   2 ?    9.6   0.8   0.00038         1       9      64 ..      75     130 ..      69     147 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.11
    PF06156.8 40 elkleneklrerleeleeeekkke 63
                 +l+ e+e+l+ +++  e+++++++
  MMETSP1325-20131115|11140_1 44 QLEHEVERLKAKVKAAESTDRSRD 67
                 577777777777777766433333 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00038
    PF06156.8   9 klseleeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkkek 64 
                  +++ l  +l++l++  + l +el++ le++++   en++l+  l+++ ee+++  +
  MMETSP1325-20131115|11140_1  75 AVQLLRAELDALVQRQRPLSDELNAALEREQAAMAENARLKAALAKSYEESAAMVT 130
                  6788999999**********************************999874443333 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.7    0.0013       3.7      34     127 ..      65     160 ..      41     166 .. 0.53

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0013
    PF03938.9  34 ykelqaklqeeakekqqelqakkkel....qkeqknlqseraqlsaeaekakeeelqakeqelqayaqqlqaelqaeqqevlqklidkiadaikkvak 127
                   ++l+ + +   + +++el+a  +      +++ ++l++e  q + +++++ + +l++  +e +a+  ++qa  +a+  +v+  +i+  a a +++ +
  MMETSP1325-20131115|11140_1  65 SRDLESRAEHAVQLLRAELDALVQRQrplsDELNAALERE--QAAMAENARLKAALAKSYEESAAMVTAAQAHWEARYMNVMASAIRTQATASAAAVG 160
                  2222222222222222222222222222222222222222..55555556667777788888888888888888888888998888886666655554 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.056   1.5e+02      36      55 ..      44      63 ..      41      74 .. 0.74
   2 ?    7.7   1.5    0.0014         4       8      54 ..      82     127 ..      77     138 .. 0.85

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.056
    PF04102.7 36 rlqrqlrllaerlkeleess 55
                 +l++++++l+ ++k++e++ 
  MMETSP1325-20131115|11140_1 44 QLEHEVERLKAKVKAAESTD 63
                 68889999999999988443 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0014
    PF04102.7   8 eLEiklafqedtieeLNevvaeqqkeidrlqrqlrllaerlkelees 54 
                  eL   +  q  + +eLN ++ + q  +++ +r  ++la+  +e    
  MMETSP1325-20131115|11140_1  82 ELDALVQRQRPLSDELNAALEREQAAMAENARLKAALAKSYEESA-A 127
                  7788888899999*************************9999876.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       980  (0.0716793); expected 273.4 (0.02)
Passed bias filter:                      427  (0.0312317); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.42s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 1115.04
//
Query:       MMETSP1325-20131115|11145_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.058   12.5   0.0       0.07   12.2   0.0    1.0  1  PF00198.18 2-oxoacid dehydrogenases acyltransferase (catalytic domain)


Domain annotation for each model (and alignments):
>> PF00198.18  2-oxoacid dehydrogenases acyltransferase (catalytic domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.1e-06      0.07     184     228 ..       7      51 ..       2      53 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.1e-06
                  TT---------EEEEEEEEETTT--------HHHHHHHTT-HHHH CS
   PF00198.18 184 vvkegeivirkvmtlslsaDHRvidGaeaarFlntlkellenper 228
                   +k++++++r+v+++s s+D R+    ea +  +++++l+ +p +
  MMETSP1325-20131115|11145_1   7 YMKDKQMAARPVLHMSGSVDLRCATMYEAKQLFERVQQLMRDPVL 51 
                  458999***********************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 321.21
//
Query:       MMETSP1325-20131115|11146_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 390.98
//
Query:       MMETSP1325-20131115|11147_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.34   10.8   1.8       0.93    9.4   1.3    1.7  1  PF12341.3 Protein of unknown function (DUF3639)


Domain annotation for each model (and alignments):
>> PF12341.3  Protein of unknown function (DUF3639)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.3   6.8e-05      0.93       4      17 ..       7      20 ..       7      21 .. 0.96

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 6.8e-05
    PF12341.3  4 itAiAlgsgwVaVa 17
                 +t++A++s++V++a
  MMETSP1325-20131115|11147_1  7 VTCMAVSSSLVVAA 20
                 8***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 404.09
//
Query:       MMETSP1325-20131115|11149_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.066   11.7   5.1      0.068   11.7   3.5    1.0  1  PF04625.8 DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   3.5     5e-06     0.068      83     140 ..      11      71 ..       4      86 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5e-06
    PF04625.8  83 gpqvgsflaqlpampa...lpgllgaaapvpapapaaaaapaaasapaadspaasvpdaaq 140
                   p  g f ++ pa        g  g aa +pap   +aa+ a a+ap ++ p a  p+  +
  MMETSP1325-20131115|11149_1  11 NPAGGQFASNNPAGGQfanNNGSWGRAASMPAPLSRPAASTAGAAAPWPNEPVARGPNGEE 71 
                  677788888888765533378999******************************9999754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 416.97
//
Query:       MMETSP1325-20131115|11148_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.013   13.7   0.1      0.018   13.2   0.0    1.2  1  PF02239.11 Cytochrome D1 heme domain


Domain annotation for each model (and alignments):
>> PF02239.11  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.3e-06     0.018     103     143 ..       8      47 ..       4      54 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.3e-06
                  EEE------EEEEEE-----TTTS---EEEEEE-SSSSEEE CS
   PF02239.11 103 vildaetLelvkvistrgltvderesRVaaivasperrefv 143
                  v+ld++tL l  +i+ r+     r sRV ++  spe +++v
  MMETSP1325-20131115|11148_1   8 VVLDSRTLLLSDNIPRRREPS-YRSSRVMSVAMSPEAPQWV 47 
                  89*************999988.8*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 650.44
//
Query:       MMETSP1325-20131115|11155_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-06   25.5   0.0      1e-05   25.4   0.0    1.1  1  PF02806.13 Alpha amylase, C-terminal all-beta domain
     0.0069   16.5   4.7      0.087   13.0   1.5    2.2  2  PF13754.1  Bacterial Ig-like domain (group 3)
  ------ inclusion threshold ------
        0.1   11.3   0.0       0.11   11.2   0.0    1.1  1  PF07239.6  Outer membrane protein OpcA


Domain annotation for each model (and alignments):
>> PF02806.13  Alpha amylase, C-terminal all-beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   2.3e-09     1e-05      13      90 ..       1      61 [.       1      65 [] 0.68

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 2.3e-09
                 EEEEE.EETCEEEEEEE.-SSS-EEEEEEECS-.---EEECCETTSCBCTCCCHEE..BE....---EEEEESTTEEEE CS
   PF02806.13 13 aFeRkdkgdkallvvfN.fspskssedyrvglpeagtYrdvlnsddeeyggsgrgnsgkvfvesngrltltipprsalv 90
                 aF R+   + ++++++N  ++s++s ++++++p +gtY++++++ ++++  s             g++++++p   a++
  MMETSP1325-20131115|11155_1  1 AFGRG---S-KAFIAINmDENSNWSATLKTQVP-DGTYTNAIDG-STQITVS------------GGQVSVNVPTIDAVA 61
                 79993...2.38*****44455566666*****.********99.4444333............466666666665555 PP

>> PF13754.1  Bacterial Ig-like domain (group 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   1.5   1.9e-05     0.087       9      27 ..      15      34 ..      10      47 .. 0.86
   2 !    4.5   0.2    0.0084        38       8      20 ..      44      56 ..      35      61 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.9e-05
    PF13754.1  9 dadGtWsvtvpal.adGtyt 27
                 d++ +Ws+t+ +   dGtyt
  MMETSP1325-20131115|11155_1 15 DENSNWSATLKTQvPDGTYT 34
                 7899******9998899998 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0084
    PF13754.1  8 adadGtWsvtvpa 20
                 ++++G+ sv+vp+
  MMETSP1325-20131115|11155_1 44 TVSGGQVSVNVPT 56
                 4689999999997 PP

>> PF07239.6  Outer membrane protein OpcA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.5e-05      0.11      55      97 ..       2      45 ..       1      58 [. 0.87

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 2.5e-05
                 ---EEEEEEE---HHHH.-------------EEEEEE-B----E CS
    PF07239.6 55 fgrskkniinletdenk.lgktknvklptgvpenridlytgyty 97
                 fgr  k  i ++ den     t + ++p g   n id  t  t 
  MMETSP1325-20131115|11155_1  2 FGRGSKAFIAINMDENSnWSATLKTQVPDGTYTNAIDGSTQITV 45
                 9**************962678999*************9888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 317.88
//
Query:       MMETSP1325-20131115|11162_1  [L=33]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (33 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.42s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 155.06
//
Query:       MMETSP1325-20131115|11160_1  [L=205]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-15   55.7   0.0    6.4e-15   54.8   0.0    1.5  1  PF08534.5  Redoxin
     0.0003   20.3   0.0    0.00056   19.4   0.0    1.5  2  PF00578.16 AhpC/TSA family


Domain annotation for each model (and alignments):
>> PF08534.5  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.8   0.0   9.4e-19   6.4e-15      44     137 ..      80     182 ..      37     191 .. 0.88

  Alignments for each domain:
  == domain 1    score: 54.8 bits;  conditional E-value: 9.4e-19
                  IIIIIH.HHHTHHHH.HH----EEEEE-SS-HHHHHHHHH....TT.TSEEE------HHHHHT..-EE-----....-EE--EEEEEE---EEEEEE-SST.T CS
    PF08534.5  44 Csaehp.yleklaklakekgvdvvavvaqndafvkeawak....eglkipvlsDesasfakalglrltedasag....irtpryavidedgkvvylevepep.g 137
                   s+++p ylek ++l kekgvd+v v  +nd  v++awak    eg    +++D++ +++ alg++lt +   g     r++r+ ++++dg+++ +ev ++  g
  MMETSP1325-20131115|11160_1  80 SSTQIPgYLEKQDAL-KEKGVDQVLVFCVNDGAVMQAWAKdqgiEGSMLQFVADPGSELTSALGMELTHPGPVGklgpKRSKRFGMFIDDGVIKTIEVSENAnG 182
                  588999******999.****************************99999******************9998888999*********************998744 PP

>> PF00578.16  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.56   3.9e+03       1      11 [.      38      48 ..      38      61 .. 0.82
   2 !   19.4   0.0   8.2e-08   0.00056      38     105 ..      77     153 ..      68     174 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 0.56
   PF00578.16  1 vgdkapdfelk 11
                 vgdk+pd +++
  MMETSP1325-20131115|11160_1 38 VGDKVPDVKVD 48
                 79999999875 PP

  == domain 2    score: 19.4 bits;  conditional E-value: 8.2e-08
   PF00578.16  38 cpvCttelpalaelyeefkkkgv.evigvsvdspeshkkfaekne...lnfpllsDeegevakaygvlnee.....k 105
                  + +  t++p + e+ + +k+kgv +v+   v++   ++++a++++     +++++D+ +e+++a+g+  +      k
  MMETSP1325-20131115|11160_1  77 SHGSSTQIPGYLEKQDALKEKGVdQVLVFCVNDGAVMQAWAKDQGiegSMLQFVADPGSELTSALGMELTHpgpvgK 153
                  5567899****************88888889**************888778889************98766555552 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.44s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 893.19
//
Query:       MMETSP1325-20131115|11166_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-23   82.4   0.3    2.5e-23   82.4   0.2    1.0  1  PF00268.16 Ribonucleotide reductase, small chain
  ------ inclusion threshold ------
      0.081   12.5   0.1      0.093   12.3   0.0    1.2  1  PF08992.6  Quinohemoprotein amine dehydrogenase, gamma subunit


Domain annotation for each model (and alignments):
>> PF00268.16  Ribonucleotide reductase, small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.2   3.6e-27   2.5e-23      23      86 ..       2      65 .]       1      65 [] 0.98

  Alignments for each domain:
  == domain 1    score: 82.4 bits;  conditional E-value: 3.6e-27
                 HHHHHHT---GGGS-GGGGHHHHHTS-HHHHHHHHHHHHHHHTTHHHHHHHHHHTHHCC-SSHH CS
   PF00268.16 23 ykkavanrWlaeevdlskDikdvekLseaerefykfvlaflaaaddlvnenlveslsaeveikd 86
                 ykka+a++W+aee+dl++D kd++++s++er+f+++vlaf+aa+d++vnenl+ ++s+ev+i++
  MMETSP1325-20131115|11166_1  2 YKKAEASFWTAEELDLAHDHKDWNNMSDNERHFVSHVLAFFAASDGIVNENLCSNFSNEVQIPE 65
                 89***********************************************************986 PP

>> PF08992.6  Quinohemoprotein amine dehydrogenase, gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.4e-05     0.093      34      65 ..       2      33 ..       1      46 [. 0.83

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 1.4e-05
                 ---TTTTSSTTTS--TTTT-TTTT----SHHH CS
    PF08992.6 34 ygcsdpcwwpaqvpdtlstykdwskdaddake 65
                 y  +++ +w a+  d+ + +kdw++ +d+ ++
  MMETSP1325-20131115|11166_1  2 YKKAEASFWTAEELDLAHDHKDWNNMSDNERH 33
                 777999******************99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       262  (0.0191633); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|11167_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.45s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|11172_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.42    8.2   5.9       0.52    7.9   4.1    1.1  1  PF05518.6  Totivirus coat protein
          2    9.6  14.3        4.3    8.6   9.3    2.0  1  PF12526.3  Protein of unknown function (DUF3729)
        3.3    7.8  29.6        0.7   10.0  17.2    2.0  2  PF13634.1  Nucleoporin FG repeat region
        3.5    7.5  11.2        5.1    7.0   7.8    1.3  1  PF04695.8  Peroxisomal membrane anchor protein (Pex14p) conserved region
        4.1    6.5  13.0        4.7    6.3   9.0    1.1  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF05518.6  Totivirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.1   0.00019      0.52     622     734 ..      39     156 ..      35     163 .. 0.61

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00019
    PF05518.6 622 RlaGaasvgemeisgvppvsetappkkeanrtgeaglvse..rgaeqvsaeaetakpervargdpvrltahhaalrapqlpraggasdGgggvppppalgaaagdap....sppssgss 734
                  R++ a s+   +is++  +s+  +   + + +++  +++    ga+++s  +  + +++ ++ +p +  ++h   ++p++p +  a dG  g + +p   +++ ++p    s+++ ++s
  MMETSP1325-20131115|11172_1  39 RSNSAPSSLFERISSSSTASSS-SSSSSFASGSKTLFMRTssAGAVPSSQSTLVSMQQQPQQQQPQQQPQQHHHHQLPPPPASSAAADGLSGPASAPGTHLVPVPVPdddeSGSDGTLS 156
                  5566666666777777444444.455555555565555440155666666666677778889999998888888888888888888887555555554444444444222356655555 PP

>> PF12526.3  Protein of unknown function (DUF3729)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   9.3    0.0016       4.3      10      88 ..      68     141 ..      42     153 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0016
    PF12526.3  10 cgestLytrtwStsgfssdfSppeaaaiaeappvglprpvstppsasdvlvlpppseeaalesdlvpsvakpasppspl 88 
                  +g +tL+ rt S+ ++ s+ S + ++  ++++  ++p++    p+  + ++lppp++++a++  l  ++++p +  +p+
  MMETSP1325-20131115|11172_1  68 SGSKTLFMRTSSAGAVPSSQSTLVSMQQQPQQ--QQPQQ---QPQQHHHHQLPPPPASSAAADGLSGPASAPGTHLVPV 141
                  799*************9999999887555554..45555...6778888999999999999999999999886655544 PP

>> PF13634.1  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0  17.2   0.00026       0.7      20     107 ..      10     107 ..       5     114 .. 0.64
   2 ?    0.0   0.1      0.31   8.5e+02       7      33 ..     119     145 ..     112     163 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00026
    PF13634.1  20 pa.tggglFGasasqtastaggglFGssntkatsttggglFGssa..tttasstsgglFGsstatt........qtttggglFGqaqa.aqtqqsssstt 107
                  pa ++g++FG++a++    ++ g+FG  +   +++++++lF   +  +t++ss+s+++F s ++t         + ++++++  + q+ +q+qq++++++
  MMETSP1325-20131115|11172_1  10 PAvSSGNPFGGAAAARGGGQPRGMFGIVSR--SNSAPSSLFERISssSTASSSSSSSSFASGSKTLfmrtssagAVPSSQSTLVSMQQqPQQQQPQQQPQ 107
                  56789*********99**********9986..58899999987552144567777788885554334433322222445555444444044444444443 PP

  == domain 2    score: 0.0 bits;  conditional E-value: 0.31
    PF13634.1   7 qaaatsgglFGskpatggglFGasasq 33 
                  +++a++ gl G ++a+g+ l+  + + 
  MMETSP1325-20131115|11172_1 119 ASSAAADGLSGPASAPGTHLVPVPVPD 145
                  356677777777777777777665544 PP

>> PF04695.8  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   7.8    0.0019       5.1      43     102 ..      47     109 ..      40     134 .. 0.58

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0019
    PF04695.8  43 alkragnseatsstaateaaqstses...stpsdnysnqsssssststpqsqqsyyqqppplv 102
                  +++r+ +s+++ss++++++ +s+s++   +t+s+ + ++s+s+  + ++q+qq++ qq+p+++
  MMETSP1325-20131115|11172_1  47 LFERISSSSTASSSSSSSSFASGSKTlfmRTSSAGAVPSSQSTLVSMQQQPQQQQPQQQPQQH 109
                  677888888744444444444444441114444445555444444444444444444444444 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   9.0    0.0017       4.7     177     268 ..      42     121 ..      13     156 .. 0.46

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0017
                  ...................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...... CS
   PF04652.11 177 sldssslpgeassasaspksaeesseslpsdplsaedsdssapgldadeasaspseapssspgvpsfpspdeseasnkdsqlPsaPtyaqkn 268
                  s++ss  ++ +ss++as +s+++s+ s +++ +           + +  a +s+++  +s +++p+ ++p++++++  ++qlP++P    ++
  MMETSP1325-20131115|11172_1  42 SAPSSLFERISSSSTASSSSSSSSFASGSKTLFM---------RTSSAGAVPSSQSTLVSMQQQPQQQQPQQQPQQHHHHQLPPPPA---SS 121
                  3333333333333333333333333333333222.........22222222222333333333333333334444444555555551...11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       707  (0.0517115); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.42s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 773.16
//
Query:       MMETSP1325-20131115|11176_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-18   65.9   0.0    2.6e-18   65.9   0.0    1.0  1  PF04840.7  Vps16, C-terminal region
  ------ inclusion threshold ------
      0.022   14.2   0.0       0.03   13.8   0.0    1.2  1  PF00637.15 Region in Clathrin and VPS


Domain annotation for each model (and alignments):
>> PF04840.7  Vps16, C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.0   3.8e-22   2.6e-18     219     314 ..       2      96 ..       1     101 [. 0.85

  Alignments for each domain:
  == domain 1    score: 65.9 bits;  conditional E-value: 3.8e-22
    PF04840.7 219 aekkkweeleklakSkkSPIGYePFvevllkqknldea.kkYiarvst.qekvklylevkdfkeAaelAaeerdesvLkevlehvksaedetlaskvq 314
                  a+  +weel k+   kkSPIGY PF e++++q    e+ ++Yi r+   +e+  l+++++ +++A+e A + +d++ L +v   +k   d+++ + v 
  MMETSP1325-20131115|11176_1   2 AKSSQWEELKKFGSEKKSPIGYGPFAEACIEQRIAPEIvAPYIERIPStEERYGLFMRINLWAKAIECAQKLKDRHRLLQVRALCK---DPRFEKSVD 96 
                  67889****************************9999648*****7555*******************************965554...444444454 PP

>> PF00637.15  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.4e-06      0.03      73     127 ..      37      91 ..      32     101 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.4e-06
                  TTHHHHHHHT-SSHHHHHHHH----THHHHSS-SSTT--TTGGGTTTTT---TTH CS
   PF00637.15  73 lekvaklcekadlyeeavilykkinefkkaisllkklkdfddaieyakkasdpel 127
                  +e va + e    +ee++ l+ +in ++kai++++klkd  + +++ + ++dp+ 
  MMETSP1325-20131115|11176_1  37 PEIVAPYIERIPSTEERYGLFMRINLWAKAIECAQKLKDRHRLLQVRALCKDPRF 91 
                  6778899999999************************999999999888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 453.13
//
Query:       MMETSP1325-20131115|11190_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.087   12.3   0.0      0.089   12.3   0.0    1.0  1  PF08208.6 DNA-directed RNA polymerase I subunit RPA34.5


Domain annotation for each model (and alignments):
>> PF08208.6  DNA-directed RNA polymerase I subunit RPA34.5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.5e-06     0.089       3      51 ..       8      58 ..       6      63 .] 0.86

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 6.5e-06
                 --EE-EEEEEETTS-GGG-SEE---S......SCSEEEE----EEEEEEGG CS
    PF08208.6  3 kgkevWlIkaPaglplskLkelpldl..sgsqkgeevlkhngkkYgisees 51
                 kg+e+  +++P+g++ s L++  +    ++++++ ++l+  g++Y i + s
  MMETSP1325-20131115|11190_1  8 KGRELIIFRVPKGFDSSLLDGTVMTApsDETNTVMASLQASGVRYAIEKGS 58
                 899999*************9877755658999999************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 264.86
//
Query:       MMETSP1325-20131115|11191_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   11.8   0.0       0.11   11.7   0.0    1.1  1  PF07867.6 Protein of unknown function (DUF1654)


Domain annotation for each model (and alignments):
>> PF07867.6  Protein of unknown function (DUF1654)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.4e-06      0.11       8      54 ..       8      54 ..       4      65 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 8.4e-06
    PF07867.6  8 lglRvqklinsPtaqkqrwvvihrlddesedeWeevleelaetdgve 54
                 l + v++l+      kq    + r ++ + + W +v + ++e +++ 
  MMETSP1325-20131115|11191_1  8 LTTEVEQLVKTARHLKQMRMALQRTETGTAAHWSTVAQYVNEIEEIG 54
                 5667888888888778888889**********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       608  (0.0444705); expected 273.4 (0.02)
Passed bias filter:                      551  (0.0403013); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.32s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 311.98
//
Query:       MMETSP1325-20131115|11198_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.07   13.2   0.0      0.078   13.0   0.0    1.1  1  PF08986.5 Domain of unknown function (DUF1889)


Domain annotation for each model (and alignments):
>> PF08986.5  Domain of unknown function (DUF1889)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.7e-06     0.078      29      71 ..       9      46 ..       1      56 [. 0.88

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 5.7e-06
    PF08986.5 29 ldfigamdvsaptpssmnestakgifkylkelgvpasaadita 71
                  d  g m vsap p+     takg+ + + +l v a+ +d+t 
  MMETSP1325-20131115|11198_1  9 TDSTGVMGVSAPLPT-----TAKGLCQMIEQLLVCAAQSDMTK 46
                 6889*********95.....9*******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 364.45
//
Query:       MMETSP1325-20131115|11200_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|11196_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-10   40.2  29.0    3.1e-09   36.6  20.1    2.0  1  PF08597.5  Translation initiation factor eIF3 subunit
  ------ inclusion threshold ------
       0.25   10.5   2.0       0.45    9.7   0.1    2.0  2  PF02433.10 Cytochrome C oxidase, mono-heme subunit/FixO
       0.36   10.3   3.6       0.83    9.2   2.5    1.5  1  PF13028.1  Protein of unknown function (DUF3889)
          1    7.9   9.8       0.37    9.3   2.0    2.0  2  PF06074.7  Protein of unknown function (DUF935)
        1.2    8.6   5.4       0.99    9.0   0.2    2.9  2  PF13919.1  Transcriptional enhancer, Asx-hm domain


Domain annotation for each model (and alignments):
>> PF08597.5  Translation initiation factor eIF3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6  20.1   1.1e-12   3.1e-09       1     245 []       1     237 []       1     237 [] 0.70

  Alignments for each domain:
  == domain 1    score: 36.6 bits;  conditional E-value: 1.1e-12
    PF08597.5   1 M.dsWDdeefevpeskkk.aavkdkwddEdededvkdsWdeeeeeekekekakkaakakakkelkakieekekakkekkekekekkeeeldeedeaaekerlrkleeesDLknAadlfgglkkalt.kdtdlesldlfnpktkedFeelrkalakkltkleksleYasfledlirdllksLssedikkvsstlnvlineKekeEkaak.........gkkKkkgkakaklnlekankklddydkydddeydd....ddDFM 245
                  M d WDd+efe p+ ++                dv + Wd+eee e ++   +  +++k  +e++ak+e+++ a+k+++ +++       + e++a++++r r  +ee+D + +++l+ g  +a + + + ++s++  + k+ +d     ++la++l + + + +  + +++l++ l  + + +++ +   ++ +l++ K k+E a k         +++Kk  ++k++++ ++ +++ +++ ++ +dey+d    +dDFM
  MMETSP1325-20131115|11196_1   1 MgDAWDDDEFEAPDLSQMgP-------------DVPNAWDDEEEFEPQP-LVTHGEAPKLSAEKQAKLEKEAAARKAAQIENAL-----QEGETDAERRLRIRDEVEEADHELTEELLAGSTSAAEpEVKIVQSMEGYKLKSMKDHIIICTDLAERLGNSKAN-HCHAGVKELLKLLDGKFDPTQLGE---MIAILATQKTKAEAALKkptekkkatKTQKKVPASKKEIK-AQVDAHAEKFGGFVEDEYEDytnqYDDFM 237
                  7789************9943.............5555555334443333.3333334445555555555554444444444333.....47899999*********************97655444044557899999*******************986544.444489***********9998866...5667788899999887777666543222222222233333.35566778899999999999********* PP

>> PF02433.10  Cytochrome C oxidase, mono-heme subunit/FixO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00017      0.45     103     167 ..      12      77 ..       8     129 .. 0.69
   2 ?    0.2   0.2      0.13   3.6e+02     190     215 ..     185     211 ..     158     231 .. 0.52

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00017
   PF02433.10 103 GPDlaRvGgkysdeWhvkhlldPrsvvpesimPaykflaekkldkediekklkalr.kvgvpYtde 167
                   PDl ++G    ++W  +   +P+ +v++   P+ +  +++kl+ke +++k +  + ++    td+
  MMETSP1325-20131115|11196_1  12 APDLSQMGPDVPNAWDDEEEFEPQPLVTHGEAPKLSAEKQAKLEKEAAARKAAQIEnALQEGETDA 77 
                  5***********************************999999998887766554430333333333 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.13
   PF02433.10 190 lery.kkaavrdfdgkekevteldalv 215
                  ++ + kk a++++++ + +++e++a v
  MMETSP1325-20131115|11196_1 185 KKPTeKKKATKTQKKVPASKKEIKAQV 211
                  111112222223333344444444433 PP

>> PF13028.1  Protein of unknown function (DUF3889)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.5    0.0003      0.83      29      89 ..     173     233 ..     171     236 .. 0.96

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0003
    PF13028.1  29 lAveevkekYpgakvvdylyvGrkkkedeqteekFkltlkekgkefgvfveisfepvtekv 89 
                  lA++++k +   +k + +++  +++k+   ++++ k ++  + ++fg fve ++e +t++ 
  MMETSP1325-20131115|11196_1 173 LATQKTKAEAALKKPTEKKKATKTQKKVPASKKEIKAQVDAHAEKFGGFVEDEYEDYTNQY 233
                  799*******************************************************985 PP

>> PF06074.7  Protein of unknown function (DUF935)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.0   0.00013      0.37     448     508 ..      45     106 ..       6     108 .. 0.77
   2 ?    3.0   0.4     0.011        29     405     452 ..     177     224 ..     148     237 .] 0.43

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00013
    PF06074.7 448 aaldelaaeleea.ldpllepllallqeaesleellerLaelypdldtseleellaralfaa 508
                  ++ +e +a+le+  +++  ++++++lqe+e+ +e + r+++ +++ d +  eella  + aa
  MMETSP1325-20131115|11196_1  45 KLSAEKQAKLEKEaAARKAAQIENALQEGETDAERRLRIRDEVEEADHELTEELLAGSTSAA 106
                  4444444556555599999************************************9988887 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.011
    PF06074.7 405 peedeavleaaakaeaaaeaaakaeaeaaaaseaaeaeqdaldaalde 452
                  + ++ea l++++++++a ++++k  a++++ +++ +a+++++  ++++
  MMETSP1325-20131115|11196_1 177 KTKAEAALKKPTEKKKATKTQKKVPASKKEIKAQVDAHAEKFGGFVED 224
                  222222222222222222222222233333333334444444444444 PP

>> PF13919.1  Transcriptional enhancer, Asx-hm domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.2   0.00036      0.99      67     106 ..      52      91 ..      31      98 .. 0.80
   2 ?    0.9   0.6      0.11   3.1e+02      92     118 ..     201     227 ..     112     235 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00036
    PF13919.1  67 saLnneFfaravqewrerLaeGeftpemqlrlkqeaekek 106
                    L++e  ar + + ++ L+eGe + e +lr++ e+e+  
  MMETSP1325-20131115|11196_1  52 AKLEKEAAARKAAQIENALQEGETDAERRLRIRDEVEEAD 91 
                  4577777788888999********************9855 PP

  == domain 2    score: 0.9 bits;  conditional E-value: 0.11
    PF13919.1  92 pemqlrlkqeaekekgkldpwkekefE 118
                  p+ +  +k +++ +++k+  + e e+E
  MMETSP1325-20131115|11196_1 201 PASKKEIKAQVDAHAEKFGGFVEDEYE 227
                  333444555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1312  (0.0959626); expected 273.4 (0.02)
Passed bias filter:                      526  (0.0384728); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.40s 00:00:01.02 Elapsed: 00:00:00.52
# Mc/sec: 1092.19
//
Query:       MMETSP1325-20131115|11203_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 443.10
//
Query:       MMETSP1325-20131115|11204_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-13   49.8   3.9    2.5e-13   49.6   2.7    1.0  1  PF04142.10 Nucleotide-sugar transporter
  ------ inclusion threshold ------
      0.046   13.1   2.0      0.076   12.4   1.4    1.3  1  PF04156.9  IncA protein


Domain annotation for each model (and alignments):
>> PF04142.10  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   2.7   3.7e-17   2.5e-13     177     238 .]       1      62 [.       1      62 [. 0.98

  Alignments for each domain:
  == domain 1    score: 49.6 bits;  conditional E-value: 3.7e-17
   PF04142.10 177 vvwlvvllqavgGlvvavvvkyaDNilkafatslaivlstvasvllfdfrisllfllgallV 238
                  ++w+ ++++a gGl+v  v+kyaD + k +a   +iv s++as+ lf+f+is lf++g+++V
  MMETSP1325-20131115|11204_1   1 MTWICIIMNAGGGLLVGTVIKYADAVTKDVALGASIVFSSIASTQLFGFEISALFTMGVSVV 62 
                  58********************************************************9987 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.4   1.1e-05     0.076      12      65 ..      30      81 ..      29      90 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.1e-05
    PF04156.9 12 iilgllliasGiallvlfasslgvlisallgivliAlgvvLlalgllllllkap 65
                 ++lg+ ++ s+ia   lf++  ++l+++++++v+ A  v+L ++ ++++ l+ap
  MMETSP1325-20131115|11204_1 30 VALGASIVFSSIASTQLFGFEISALFTMGVSVVIYA--VFLYGGRTYCCGLLAP 81
                 689******************999999999999998..6777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      373  (0.027282); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.61
# Mc/sec: 365.35
//
Query:       MMETSP1325-20131115|11208_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-11   41.3   0.0    1.3e-10   40.8   0.0    1.2  1  PF04564.10 U-box domain
    5.9e-05   22.4   0.0    0.00041   19.7   0.0    2.1  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
      0.003   16.9   0.2     0.0053   16.1   0.1    1.5  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
      0.027   13.5   0.0      0.073   12.1   0.0    1.7  1  PF04641.7  Replication termination factor 2


Domain annotation for each model (and alignments):
>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   3.9e-14   1.3e-10       2      72 ..       5      75 ..       4      76 .. 0.97

  Alignments for each domain:
  == domain 1    score: 40.8 bits;  conditional E-value: 3.9e-14
                 -GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHHCC CS
   PF04564.10  2 PdefldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKekIdkfleekk 72
                 P efl++i+   ++dPv  P g +++r++ + +++++++ +P+t +pl   e++    + e+ +k+ +e++
  MMETSP1325-20131115|11208_1  5 PKEFLCEISQRPLQDPVRSPYGNVFERNIFKTWVNRNGSICPITGQPLGLTEVVRADDVVEAMEKWKAEES 75
                 99****************************************************************99875 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.2e-07   0.00041      10      57 ..       7      46 ..       2      47 .. 0.85
   2 ?    1.7   0.0     0.051   1.8e+02      12      19 ..      44      52 ..      41      56 .. 0.83

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.2e-07
                 X-B-TTT-S.-SS....EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
    PF13445.1 10 ifaCpiske.qsteqnpPvvLpCGhvisrealeklakggrsnkgrfkCP 57
                  f C is+  +++    Pv+ p G+v++r+ ++ +++    n+    CP
  MMETSP1325-20131115|11208_1  7 EFLCEISQRpLQD----PVRSPYGNVFERNIFKTWVNR---NG--SICP 46
                 79*********88....*******************92...33..5566 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.051
                 B-TTT-S.- CS
    PF13445.1 12 aCpiske.q 19
                 +Cpi+++ +
  MMETSP1325-20131115|11208_1 44 ICPITGQpL 52
                 7****9866 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.5e-06    0.0053      13      55 ..       9      49 ..       3      51 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.5e-06
                 B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT--B------ CS
    PF11789.3 13 kCpltlkpfkePvtskkCnHvFEkeaIlkmlkrkkkvkCPvaG 55
                  C ++++p+++Pv+s   n vFE++   + + +++   CP+ G
  MMETSP1325-20131115|11208_1  9 LCEISQRPLQDPVRSPYGN-VFERNIFKTWV-NRNGSICPITG 49
                 6**************9866.****9888888.777778**987 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.1e-05     0.073     112     186 ..       6      78 ..       2     109 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.1e-05
    PF04641.7 112 apfiCpvtglelngktkfvalrkcGcVfsekalkevk..eekvCpvCnkefkeedvvplnptkeelellkarleeek 186
                  ++f+C ++++ l++ ++  +    G Vf+ + +k+    + ++Cp++++++  ++vv      e +e+ ka+  +++
  MMETSP1325-20131115|11208_1   6 KEFLCEISQRPLQDPVRSPY----GNVFERNIFKTWVnrNGSICPITGQPLGLTEVVRADDVVEAMEKWKAEESSKR 78 
                  57999999999999999755....9*********985457889***********99976666555555555433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|11211_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|11212_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|11213_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        83  (0.0060708); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.34s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 264.09
//
Query:       MMETSP1325-20131115|11205_1  [L=348]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        6.6    5.0  11.1       0.11   10.9   2.2    1.7  2  PF04791.11 LMBR1-like membrane protein
        7.2    6.5  11.0       0.94    9.3   0.3    2.5  2  PF02254.13 TrkA-N domain


Domain annotation for each model (and alignments):
>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.8      0.11   7.4e+02     227     269 ..      65     109 ..      38     159 .. 0.48
   2 ?   10.9   2.2   1.6e-05      0.11     188     336 ..     159     337 ..     152     343 .. 0.65

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 0.11
   PF04791.11 227 edveeqisk..sateegklsrelkkaaesnsqeedslaldreenk 269
                  +++ +q++   +at  +k ++e+k ++   ++ee+++al r+ + 
  MMETSP1325-20131115|11205_1  65 VNMANQRRDdvIATKMAKAHKESKTPIVLAREEEEKAALKRQLEA 109
                  333333332113334444555555555555555555555444332 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 1.6e-05
   PF04791.11 188 lwkllvreekaekledekeeaessvddi.lesvdrl.srlledveeqisksateegklsrelkkaaesnsqeedsla..ldreenkivkseeklllikeedlksletlknkkaqrkvav............................lsklqrslvyplaaltlLvltflsillvvtntls 336
                  + +++ r+e+ae     k  a ss+++  ++  +     +++ + e++ ++a + ++ ++ +k  ae+  q++ +++    ++e+k  ++ ++ + +k +d+++  ++ ++++ ++++v                             s++ ++ ++p     l v  +  ++  v ++ +
  MMETSP1325-20131115|11205_1 159 MAEAAARKEEAEAATVAKMAAMSSSKAAeIKASEAAaAAVKQKNSEKRVAEANARAEAAKAAK--AERAMQMSSKANpsFREQEKKAEEEAAARIAQKMADAEARRQTAEAEKVARMQVlsspgpkgkrtrptasttaseqgsasdtTSETAMTNSMPTTLSGLVVSVASYVFALVLQIFK 337
                  566677766666666666666666654314444444466666666666666666666666666..44444444444411345566666666777778888888888888888888888899999999999999999999999988887777777777777776666666666666665554 PP

>> PF02254.13  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.3   0.00014      0.94      48     110 ..      46     109 ..      40     115 .. 0.89
   2 ?    0.6   3.2     0.072   4.9e+02      57     108 ..     168     222 ..     129     230 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00014
                  -TTSHHHHHHTT-----EEEE--SSHHHHHHHHHHHCCC-TTSEEEEEESSGGGHHHHHH.--- CS
   PF02254.13  48 datdeevLeeagieeadaviaatgddeanllavllakelnpkkkiiaraqdeenakllkk.lga 110
                  da+++ v +   +e+ +  + + ++  + ++a+++ak + + k+ i+ a++ee++ +lk+ l a
  MMETSP1325-20131115|11205_1  46 DASSPRVCDTVTLEDSENRVNMANQRRDDVIATKMAKAHKESKTPIVLAREEEEKAALKRqLEA 109
                  899999999999999999999999*************99999**************99773555 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.072
                  HTT-----EEEE--SSHHHHHHHHHHHCCC-TT...SEEEEEESSGGGHHHHHH- CS
   PF02254.13  57 eagieeadaviaatgddeanllavllakelnpk...kkiiaraqdeenakllkkl 108
                  ea+++++  + a++++++a + a+++a    ++    k +a+a+ +++a ++ k+
  MMETSP1325-20131115|11205_1 168 EAEAATVAKMAAMSSSKAAEIKASEAAAAAVKQknsEKRVAEANARAEAAKAAKA 222
                  5666666667777777766666666554443333446788999988887777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2153  (0.157475); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        78  (0.00570509); expected 13.7 (0.001)
Passed Fwd filter:                        27  (0.00197484); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.41u 0.38s 00:00:01.79 Elapsed: 00:00:00.74
# Mc/sec: 1126.94
//
Query:       MMETSP1325-20131115|11220_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0095   15.9   0.1      0.011   15.7   0.0    1.1  1  PF13157.1 Protein of unknown function (DUF3992)


Domain annotation for each model (and alignments):
>> PF13157.1  Protein of unknown function (DUF3992)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   8.4e-07     0.011      17      57 ..      39      79 ..      30      81 .] 0.90

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 8.4e-07
    PF13157.1 17 vytdninqnivgtgyvkndvgvgeaitvnvlvagtvvdtft 57
                 v+ +n++  ++gt+ v+ +  ++++  + v+v gtvv+ ++
  MMETSP1325-20131115|11220_1 39 VFGSNTQPGVMGTVAVQAQAAAAQPPQLGVVVQGTVVQXQM 79
                 8999*******************99999999******9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 366.24
//
Query:       MMETSP1325-20131115|11222_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-18   65.1   0.0    4.5e-18   64.9   0.0    1.0  1  PF05743.8 UEV domain


Domain annotation for each model (and alignments):
>> PF05743.8  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9   0.0   3.3e-22   4.5e-18       1      67 [.      10      76 ..      10      77 .] 0.98

  Alignments for each domain:
  == domain 1    score: 64.9 bits;  conditional E-value: 3.3e-22
                 HHHHHHHHHHH-TT-EEEEEEEE-----EEEEEEEE--EE--------EE-EEEE--TTTTTS--EE CS
    PF05743.8  1 vvkdvlkllqkfknlkprtevytfedgesklllnlkGtipveykgatyniPiliwvpesyPveaPiv 67
                 v +dv++l  + ++l p+    +++dg++ +ll l Gtip++y gatyniP+++++p++yP++aPi+
  MMETSP1325-20131115|11222_1 10 VRQDVMQLTGQIRSLVPKSSHLISNDGSESTLLVLAGTIPITYGGATYNIPVELYIPQAYPRAAPIC 76
                 579***************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|11230_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0023   17.4   0.5     0.0023   17.3   0.3    1.0  1  PF13901.1 Domain of unknown function (DUF4206)


Domain annotation for each model (and alignments):
>> PF13901.1  Domain of unknown function (DUF4206)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.3   1.7e-07    0.0023      84     134 ..      17      67 ..       9      72 .] 0.83

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.7e-07
    PF13901.1  84 keylktCreaeeekkelkqsreylleeaelysladLvevkkgkllesleel 134
                  ++ l++C+ +++  ke ++ ++++l+e++ + l+dL +  + k +e+l ++
  MMETSP1325-20131115|11230_1  17 QTALEQCKVKKNSMKECNTRQNHVLNEMSSWCLQDLGAKVNRKKIETLVTV 67 
                  56799*******************************876666655555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       753  (0.0550761); expected 273.4 (0.02)
Passed bias filter:                      537  (0.0392774); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 325.54
//
Query:       MMETSP1325-20131115|11235_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-05   23.2   3.1    0.00019   21.4   2.2    2.0  1  PF07974.8  EGF-like domain
  ------ inclusion threshold ------
      0.083   12.7   1.2      0.083   12.7   0.9    1.9  2  PF00008.22 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   2.2   2.8e-08   0.00019       7      27 ..     172     192 ..     167     201 .. 0.80

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 2.8e-08
    PF07974.8   7 iCgghGtCvkqcgkCvCdsgy 27 
                  +C+++G+C+++ g+C C sg+
  MMETSP1325-20131115|11235_1 172 ECNARGICDRTLGRCTCLSGF 192
                  5**********99*******5 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         1   7.2e+03      23      28 ..      35      40 ..      35      41 .. 0.77
   2 ?   12.7   0.9   1.2e-05     0.083       3      29 ..     169     193 ..     168     196 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 1
                 E--TTC CS
   PF00008.22 23 eCpeGy 28
                 eCp G 
  MMETSP1325-20131115|11235_1 35 ECPRGD 40
                 799995 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 1.2e-05
                  TT.TCSS--EEEEECCTEEEEE--TTCT CS
   PF00008.22   3 pn.pCsngGtCvdtpgggytCeCpeGyt 29 
                  +n  C+ +G+C +t+    +C+C +G++
  MMETSP1325-20131115|11235_1 169 ENvECNARGICDRTL---GRCTCLSGFN 193
                  5778***********...********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 1118.30
//
Query:       MMETSP1325-20131115|11236_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 434.89
//
Query:       MMETSP1325-20131115|11234_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-07   30.6   0.0    2.1e-07   30.2   0.0    1.2  1  PF00025.16 ADP-ribosylation factor family
    1.8e-07   30.5   0.0      2e-07   30.4   0.0    1.2  1  PF00071.17 Ras family
    1.1e-06   29.0   0.0    1.5e-06   28.5   0.0    1.2  1  PF08477.8  Miro-like protein
    1.9e-06   28.5   0.0      3e-06   27.8   0.0    1.6  1  PF13207.1  AAA domain
      2e-05   24.7   0.0    4.7e-05   23.5   0.0    1.9  1  PF13238.1  AAA domain
    0.00038   19.1   0.1        0.2   10.2   0.0    2.1  2  PF00503.15 G-protein alpha subunit
     0.0024   17.6   0.0     0.0034   17.1   0.0    1.3  1  PF13671.1  AAA domain
     0.0068   16.4   0.0     0.0088   16.1   0.0    1.2  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
     0.0089   16.0   0.0      0.015   15.3   0.0    1.3  1  PF13401.1  AAA domain
  ------ inclusion threshold ------
      0.015   14.6   0.0      0.028   13.8   0.0    1.4  1  PF10662.4  Ethanolamine utilisation - propanediol utilisation
      0.027   14.3   0.0      0.042   13.7   0.0    1.4  1  PF01926.18 50S ribosome-binding GTPase
      0.038   13.5   0.0      0.072   12.6   0.0    1.4  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
      0.049   12.2   0.1      0.059   12.0   0.1    1.1  1  PF03215.10 Rad17 cell cycle checkpoint protein
      0.057   13.6   0.1       0.08   13.1   0.0    1.3  1  PF13191.1  AAA ATPase domain
      0.069   12.5   0.1       0.23   10.9   0.0    1.9  2  PF13555.1  P-loop containing region of AAA domain
       0.12   11.3   0.0       0.22   10.5   0.0    1.5  1  PF04670.7  Gtr1/RagA G protein conserved region
       0.13   11.4   0.0       0.34   10.0   0.0    1.7  2  PF09439.5  Signal recognition particle receptor beta subunit
       0.13   11.0   0.1       0.18   10.5   0.0    1.2  1  PF00437.15 Type II/IV secretion system protein


Domain annotation for each model (and alignments):
>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   2.8e-10   2.1e-07      14      90 ..      12      99 ..       2     135 .. 0.85

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 2.8e-10
                 EEEEEEE--TT---HHHHHHHHHS-EEEE-S--S-EEEEEEE...........TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEE CS
   PF00025.16 14 elrilllGLDnaGKtTilkklkleelvttvPTigfnveelei...........knlkftvwDvGGqeklRplWknYfektdavifvvD 90
                  l+il+ G  ++GKtTi   l++e  + ++P    +++ ++i            n + ++wDv G+++  ++W   ++++d+v+ v  
  MMETSP1325-20131115|11234_1 12 GLKILVCGPSASGKTTICRFLSNETDTLVQPSSYIETKGVRIlecernlpgrpGNQQCEIWDVSGNSQFESCWPAIMQHVDGVVLVYN 99
                 689*****************9999999999*999999999999999999999999****************************98864 PP

>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   2.7e-10     2e-07       1     103 [.      14     123 ..      14     168 .. 0.82

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 2.7e-10
                  EEEEE-------HHHHHHHHHSSS.....-SS-TTTS-EEEEEEEEEETTE..EEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST.T CS
   PF00071.17   1 KlvlvGdsavGKtslllrfvedkF.....keeyesTigvdfytkeievdgk..evkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae.e 103
                  K+++ G sa GKt++ +rf +++      +++y++T gv  ++ e ++ g+  + + eiwD  G  +f+s  ++ +++++g++lvy+ ++     ++ +w++ + r  + +
  MMETSP1325-20131115|11234_1  14 KILVCGPSASGKTTI-CRFLSNETdtlvqPSSYIETKGVRILECERNLPGRpgNQQCEIWDVSGNSQFESCWPAIMQHVDGVVLVYNPDKDGHDIEIGDWYDYFVRNNDlD 123
                  899**********97.578877751112256888999998887777777542267899*****************************999999999999999988888743 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0     2e-09   1.5e-06       1      85 [.      14     102 ..      14     126 .. 0.79

  Alignments for each domain:
  == domain 1    score: 28.5 bits;  conditional E-value: 2e-09
    PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefp..kkklpeeikgdtlavktlevdvdtel..lelwdlggreelkkehelllkkadaillvydltd 85 
                  k++v+G + +GK+++ + l  e++   + + + e+kg ++   + ++ +  +    e+wd++g+ ++++  + +++ +d+++lvy  ++
  MMETSP1325-20131115|11234_1  14 KILVCGPSASGKTTICRFLSNETDTlvQPSSYIETKGVRILECERNLPGRPGNqqCEIWDVSGNSQFESCWPAIMQHVDGVVLVYNPDK 102
                  89************999999988886666777777777777666666665444789*************99999***********6554 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0     4e-09     3e-06       1      24 [.      14      37 ..      14     133 .. 0.76

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 4e-09
                 EE--B--TT---HHHHHHHHHHST CS
    PF13207.1  1 viaitGppGsGKsTlakeLaerlg 24
                 +i+++Gp++sGK+T+++ L+++ +
  MMETSP1325-20131115|11234_1 14 KILVCGPSASGKTTICRFLSNETD 37
                 69*******************985 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   6.2e-08   4.7e-05       1      23 [.      15      44 ..      15     162 .. 0.78

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 6.2e-08
    PF13238.1  1 IlitGtpGvGKtTlakeLaerl.......g 23
                 Il++G++++GKtT+++ L++++       +
  MMETSP1325-20131115|11234_1 15 ILVCGPSASGKTTICRFLSNETdtlvqpsS 44
                 99*****************99755555541 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00026       0.2      58      76 ..      12      30 ..       3      38 .. 0.86
   2 !    7.4   0.0    0.0018       1.4     209     255 ..      46      97 ..      30      99 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00026
                 EEEEEEEXXXXXXXHHHHH CS
   PF00503.15 58 evklLlLGqgeSGKsTilk 76
                   k+L++G + SGK+Ti++
  MMETSP1325-20131115|11234_1 12 GLKILVCGPSASGKTTICR 30
                 579**************98 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0018
                  XXXXXXEEEEEXX......XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEE CS
   PF00503.15 209 lkttGiseikfeve.....sktefrlvDvGGqrserkkWipcfedvdaiiFl 255
                  ++t G+   + e +     ++++++++Dv+G    + +W  +++ vd ++ +
  MMETSP1325-20131115|11234_1  46 IETKGVRILECERNlpgrpGNQQCEIWDVSGNSQFESCWPAIMQHVDGVVLV 97 
                  5788888777777788999999***********99999*********99866 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.5e-06    0.0034       2      25 ..      15      38 ..      15      79 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 4.5e-06
    PF13671.1  2 vllvGlpGsGKstlaerllkklgy 25
                 +l++G+++sGK+t ++ l +++++
  MMETSP1325-20131115|11234_1 15 ILVCGPSASGKTTICRFLSNETDT 38
                 689*************99877663 PP

>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.2e-05    0.0088       1      35 [.      15      54 ..      15      89 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.2e-05
                 EEEE-------HHHHHHHHHHCT.....HEEEEEECCSSS CS
   PF00004.24  1 vllyGppGtGKTllakavakelg.....vefleisgsell 35
                 +l++Gp   GKT++++ + +e++     ++++e++g ++l
  MMETSP1325-20131115|11234_1 15 ILVCGPSASGKTTICRFLSNETDtlvqpSSYIETKGVRIL 54
                 699******************8555556889999998887 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.9e-05     0.015       7      32 ..      15      40 ..       9      66 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.9e-05
    PF13401.1  7 lvvtGesGvGKTtllrrlarqldeea 32
                 ++v+G+s +GKTt +r l ++ d   
  MMETSP1325-20131115|11234_1 15 ILVCGPSASGKTTICRFLSNETDTLV 40
                 69****************99876554 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   3.6e-05     0.028       3      25 ..      14      36 ..      13      63 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.6e-05
    PF10662.4  3 killiGkvgaGKTtLtqalkgee 25
                 kil+ G++ +GKTt+++ l++e+
  MMETSP1325-20131115|11234_1 14 KILVCGPSASGKTTICRFLSNET 36
                 89*****************9964 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.6e-05     0.042       2      88 ..      15     101 ..      14     139 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 5.6e-05
                  EEEE--TT---HHHHHHHHCSTCTEETS-T.T-SSSESE..EEE......ETTEEEEEE---SSSHHHHHHHHHHHHHHHHHH.CTSSEEEEEEETT CS
   PF01926.18   2 vaivGrpNvGKStLinaLtgekaakvsdyp.gtTrdite..nev......kkekiilvDtPGiiegasedkeiegikkylekv.eradvlllvvdas 88 
                  + + G + +GK+t+ + L++e+ + v+     +T+ + +  +e        +++++++D+ G           +++++ + ++ +++d+++lv + +
  MMETSP1325-20131115|11234_1  15 ILVCGPSASGKTTICRFLSNETDTLVQPSSyIETKGVRIleCERnlpgrpGNQQCEIWDVSG----------NSQFESCWPAImQHVDGVVLVYNPD 101
                  7899***************9775444444313344443323332556665555578*****9..........2356778888889999999988733 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   9.5e-05     0.072       3      22 ..      15      34 ..      14      42 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 9.5e-05
                 EEEE-------HHHHHHHHH CS
    PF03205.9  3 vavvGpkdsGKTtlieklvn 22
                 ++v+Gp+ sGKTt+++ l n
  MMETSP1325-20131115|11234_1 15 ILVCGPSASGKTTICRFLSN 34
                 78*************98876 PP

>> PF03215.10  Rad17 cell cycle checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   7.7e-05     0.059      48      72 ..      15      39 ..       1      57 [. 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 7.7e-05
   PF03215.10 48 llltGPsGcgKsTtvkvlskelgik 72
                 +l++GPs +gK+T+ + ls e    
  MMETSP1325-20131115|11234_1 15 ILVCGPSASGKTTICRFLSNETDTL 39
                 799****************998655 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   0.00011      0.08      19      48 ..       7      32 ..       2      92 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 0.00011
    PF13191.1 19 vsegsp.lllvtGpsGiGKSsLlrelakpil 48
                 ++++++  +lv Gps +GK+++ r      l
  MMETSP1325-20131115|11234_1  7 ATAPTGlKILVCGPSASGKTTICRF-----L 32
                 556666449*************987.....4 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0    0.0003      0.23      21      39 ..      10      28 ..       4      30 .. 0.84
   2 ?   -2.1   0.0       3.3   2.5e+03       4      21 ..     107     124 ..     105     134 .. 0.59

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.0003
    PF13555.1 21 pkgkntlltGasGsGKSTl 39
                 p+g + l+ G+s sGK+T+
  MMETSP1325-20131115|11234_1 10 PTGLKILVCGPSASGKTTI 28
                 456679************8 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 3.3
    PF13555.1   4 lqlvNWgtfdghtveidp 21 
                  +++ +W+ +  +  ++d 
  MMETSP1325-20131115|11234_1 107 IEIGDWYDYFVRNNDLDA 124
                  556667776655555553 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00029      0.22       1      61 [.      14      80 ..      14     118 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00029
    PF04670.7  1 klLLmGksgsGKtSmrsiiFsnylardtlrLgaTi...........dveqshvrflgnlklnlwDcgGqeef 61
                 k+L++G+s sGKt+++  + +++      +L + +           + e++     gn + ++wD+ G+++f
  MMETSP1325-20131115|11234_1 14 KILVCGPSASGKTTICRFLSNET-----DTLVQPSsyietkgvrilECERNLPGRPGNQQCEIWDVSGNSQF 80
                 89************987654432.....22222221222333444455555555566677777777777665 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00044      0.34       5      35 ..      14      44 ..      11      87 .. 0.75
   2 ?   -1.5   0.0       1.5   1.1e+03      95     120 ..     153     178 ..     147     181 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00044
                 EEEEE--TT---HHHHHHHHHSS-------S CS
    PF09439.5  5 avllvGlsdsGKTslftrLttdsvkktvtSq 35
                 ++l+ G+s sGKT++   L++++ +  + S 
  MMETSP1325-20131115|11234_1 14 KILVCGPSASGKTTICRFLSNETDTLVQPSS 44
                 5899*************99998766666554 PP

  == domain 2    score: -1.5 bits;  conditional E-value: 1.5
                  HHHHHHHHHHHHHHH-----EEEEEE CS
    PF09439.5  95 vAEllyeilliteklknavdiliACn 120
                  v +  y+ ++ t++++n  d+l+ C 
  MMETSP1325-20131115|11234_1 153 VVDTSYDTAITTVLQQNFDDFLVECY 178
                  44555777778888888888888885 PP

>> PF00437.15  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00024      0.18     130     153 ..      14      37 ..       6      47 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00024
   PF00437.15 130 nilvsGgTgsGKttllnallaein 153
                   ilv G+  sGKtt+   l +e +
  MMETSP1325-20131115|11234_1  14 KILVCGPSASGKTTICRFLSNETD 37 
                  79************9998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 801.69
//
Query:       MMETSP1325-20131115|11237_1  [L=446]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.3e-09   36.3   0.0    2.4e-07   30.8   0.0    2.4  1  PF05721.8 Phytanoyl-CoA dioxygenase (PhyH)
     0.0041   15.5   0.0      0.018   13.4   0.0    1.9  3  PF07350.7 Protein of unknown function (DUF1479)


Domain annotation for each model (and alignments):
>> PF05721.8  Phytanoyl-CoA dioxygenase (PhyH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   3.6e-11   2.4e-07       1     202 [.     147     387 ..     147     392 .. 0.68

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 3.6e-11
                  HHH---EEE-----HHHHHHHHHH---T...HHHHHT-------E..E----B-----BSGGTEEEE---HHH...HHHHHHHHH----SEEE...EEEEE....E---S-----E..EEE-GGGTS-....................EE-....---EE-........EEEESS-B-S----EEEE---------..........................-EEE----..............---- CS
    PF05721.8   1 feedGylviegflsaeevealraeieal...ldralesgdkidff..feekaaadedglleksinkvghflhp...rkvadlvrailgqdvyvaavlqsmyqd..ifkqpkiGgev.qpwHqDstflp....................tdp....eesvvg........vwialedateenGclrfiPGSHkweegplrrrlpeddteae...ddeakkedeeeavpvevkaGdavlfhgrllHgsga 202
                  ++++G++v++++ls+ e+ea r+ei ++    + +  s+++i+++  ++ ka++   +    +    +  +     +++a+ +  +l +d+ +    ++++    ++ + k  + +   +H D   ++                      +    e+++++          + l d  e  G+ +++PG H   +    ++l  ++  ae      a ++  ++a+ v+ +aG++++++ rl+Hgs++
  MMETSP1325-20131115|11237_1 147 YDQYGFAVVRDVLSDRECEATRDEIWDYieeSEGKGVSRHDISTWsnWKSKAFGMPGRDS-AALWRPQLCR-NrvnPRIAQSFATVLDEDPSNL---RTNHDRwaMYRPIKAAA-TrDNVHLDINPWQyatndtrvgqrraalsyshfE-DlhggENNIIScafgphaqGVLNLADNEEADGGFQCVPGFHHHFNRFVFETLGGEPIGAEykyGFAAGSPLHKMAQRVTARAGSFIVWDARLVHGSAP 387
                  79***********************99955433444444444443113344444433333.2222222222.2577788888899999998874...44443343555554444.3488899999999888888877777777666540.2444433333355555555999*********************8777777777777777788655666777899999999****************98 PP

>> PF07350.7  Protein of unknown function (DUF1479)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   2.6e-06     0.018      65     115 ..     141     198 ..     130     236 .. 0.73
   2 ?   -1.7   0.0       0.1   6.9e+02     237     259 ..     307     329 ..     295     334 .. 0.86
   3 ?   -3.8   0.0      0.43     3e+03     324     338 ..     369     383 ..     362     387 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.6e-06
    PF07350.7  65 aelsaeikrrGvavirgvvpeeeaeewkeeieeYlekn.......ddfkglpkekpqi 115
                  ++ +a   ++G av+r v++ +e e+  +ei +Y+e+        +d++++++ k + 
  MMETSP1325-20131115|11237_1 141 EAIKAFYDQYGFAVVRDVLSDRECEATRDEIWDYIEESegkgvsrHDISTWSNWKSKA 198
                  455566689***************************9955566554444444444443 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.1
    PF07350.7 237 fQGwlalsdvkpgeGtlrvlPlv 259
                   QG+l l d+++ +G  + +P  
  MMETSP1325-20131115|11237_1 307 AQGVLNLADNEEADGGFQCVPGF 329
                  5******************9965 PP

  == domain 3    score: -3.8 bits;  conditional E-value: 0.43
    PF07350.7 324 veaGdyvvWhcDlih 338
                   +aG ++vW + l+h
  MMETSP1325-20131115|11237_1 369 ARAGSFIVWDARLVH 383
                  5799******99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.33s 00:00:01.09 Elapsed: 00:00:00.50
# Mc/sec: 2137.55
//
Query:       MMETSP1325-20131115|11250_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.015   14.7   0.1      0.017   14.5   0.1    1.1  1  PF03194.10 LUC7 N_terminus
        0.1   12.0   0.1       0.13   11.6   0.0    1.1  1  PF07323.7  Protein of unknown function (DUF1465)


Domain annotation for each model (and alignments):
>> PF03194.10  LUC7 N_terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   2.6e-06     0.017     112     171 ..      39      98 ..      26     116 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 2.6e-06
   PF03194.10 112 eqtkeaaelkaeelaeleeeinkllkeaeelgeegkvdeaqklmeeveelkekkeeleqq 171
                  +  + ++++ ++e  +l e+++k+  e++ + e+++ d+a +l + ++elk+k e +e+ 
  MMETSP1325-20131115|11250_1  39 DDAAGPDPALVAECVALLEQVAKIEGEIDGAVEADDFDKADELQTTLDELKAKLEAAEPA 98 
                  555556666688889999***********************************9999884 PP

>> PF07323.7  Protein of unknown function (DUF1465)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     2e-05      0.13      73     154 ..      10      90 ..       8      95 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2e-05
    PF07323.7  73 AvkeGemseeqvesekarvrldeaseedaaevaelpeelreLverserLeervarLdeelreeaeaaeee..npvseqlerLka 154
                  Av +Ge  +++++++++   +d as++++++ a  ++   +Lv++  +L e+va+++ e+   +ea + +  + +++ l+ Lka
  MMETSP1325-20131115|11250_1  10 AVDAGEGGAADAADDGSTAANDGASSPAEDDAAGPDP---ALVAECVALLEQVAKIEGEIDGAVEADDFDkaDELQTTLDELKA 90 
                  8999****************99998555555555444...69*******************99888776666778888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       637  (0.0465916); expected 273.4 (0.02)
Passed bias filter:                      518  (0.0378877); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.42s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 616.21
//
Query:       MMETSP1325-20131115|11251_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.3    7.2   8.2       0.22   11.6   1.1    2.1  3  PF07941.6 Potassium channel Kv1.4 tandem inactivation domain


Domain annotation for each model (and alignments):
>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.1   1.6e-05      0.22      11      60 ..      20      69 ..      16      97 .. 0.74
   2 ?   -2.3   0.0      0.35   4.8e+03      39      39 ..     102     102 ..      85     124 .. 0.60
   3 ?   -1.4   0.5      0.18   2.5e+03      25      41 ..     119     135 ..     101     139 .] 0.72

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.6e-05
                 ---TT-S----CCCHHHHHHHHHTTSSTTXXXHHHHSSXSXXXXXXX.XXX CS
    PF07941.6 11 sGcsshlPyGyaaqararererlahsraaaaaavaaataaveGeGGs.GGG 60
                  Gc +h+   +   ar+ +re       a  aa+a a+  v  + G+  GG
  MMETSP1325-20131115|11251_1 20 DGCREHIKVRFWNVARSDQREEVIDRGVAWHAAAA-AVRVVSPQRGEaSGG 69
                 59*******************98765554444444.555555555543444 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.35
                  T CS
    PF07941.6  39 a 39 
                  a
  MMETSP1325-20131115|11251_1 102 A 102
                  2 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.18
                  HHHHHHHHHTTSSTTXX CS
    PF07941.6  25 ararererlahsraaaa 41 
                  a  r   r +h  a aa
  MMETSP1325-20131115|11251_1 119 AVVRTMRRWTHRMAVAA 135
                  44566667777666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 666.19
//
Query:       MMETSP1325-20131115|11255_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|11263_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 412.99
//
Query:       MMETSP1325-20131115|11256_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-14   52.1   0.2    8.8e-14   51.1   0.1    1.5  1  PF00249.26 Myb-like DNA-binding domain
    0.00017   21.5   0.0    0.00031   20.6   0.0    1.4  1  PF13921.1  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1   0.1   1.3e-17   8.8e-14       2      47 ..      12      55 ..      11      56 .. 0.97

  Alignments for each domain:
  == domain 1    score: 51.1 bits;  conditional E-value: 1.3e-17
                 TSS-HHHHHHHHHHHHHTTS-.HHHHHHHCTTTS-HHHHHHHHHHH CS
   PF00249.26  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                 grWT+eE++l++++ + +G + W ++a+ +g +Rt  q++s+ qky
  MMETSP1325-20131115|11256_1 12 GRWTQEEHDLFLRGMAIYGRR-WTKVAEVVG-TRTTVQVRSHAQKY 55
                 8******************99.*********.*************9 PP

>> PF13921.1  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   4.6e-08   0.00031       1      41 [.      14      54 ..      14      66 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.6 bits;  conditional E-value: 4.6e-08
    PF13921.1  1 WtdeEdeiLlklveeygndWseIaeelgrRtplacqdrwkn 41
                 Wt+eE +  l+ +  yg+ W+++ae  g Rt  +++ + ++
  MMETSP1325-20131115|11256_1 14 WTQEEHDLFLRGMAIYGRRWTKVAEVVGTRTTVQVRSHAQK 54
                 ***************************99******998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 1453.44
//
Query:       MMETSP1325-20131115|11264_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.002   17.8   2.1      0.002   17.8   1.4    2.5  2  PF05887.6  Procyclic acidic repetitive protein (PARP)
  ------ inclusion threshold ------
        3.1    6.7   7.0        4.7    6.1   4.9    1.2  1  PF01690.12 Potato leaf roll virus readthrough protein


Domain annotation for each model (and alignments):
>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   1.4   2.9e-07     0.002      90     114 ..      72      95 ..      31     114 .. 0.66
   2 ?   -5.7   5.4         2   1.4e+04      23      52 ..     120     152 ..     117     216 .. 0.71

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 2.9e-07
    PF05887.6  90 tepeeeeepepepetepepepepep 114
                  + pe+ ++ epe etepepep  + 
  MMETSP1325-20131115|11264_1  72 SAPEPGPKSEPELETEPEPEP-ADA 95 
                  345555555556666666666.222 PP

  == domain 2    score: -5.7 bits;  conditional E-value: 2
    PF05887.6  23 GfaaaaeesedkvlvkG.GkGkge..kgtkvga 52 
                  G  a+a e++ kv + G  kGkg+  ++   g+
  MMETSP1325-20131115|11264_1 120 GKKASATEPQGKVKATGkAKGKGDgsNAEAQGS 152
                  666778888877766553344433003333343 PP

>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   4.9   0.00068       4.7       2      27 ..      69      94 ..      68     105 .. 0.89

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00068
   PF01690.12  2 dsepgPkPgPsPtPpppPqPtPePtP 27
                 d+ + P+PgP+ +P+++ +P+PeP+ 
  MMETSP1325-20131115|11264_1 69 DGTSAPEPGPKSEPELETEPEPEPAD 94
                 8899*******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 1266.00
//
Query:       MMETSP1325-20131115|11270_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-09   36.7   0.0    3.5e-09   36.2   0.0    1.2  1  PF05990.7  Alpha/beta hydrolase of unknown function (DUF900)
  ------ inclusion threshold ------
      0.028   14.1   0.0      0.036   13.8   0.0    1.4  1  PF12697.2  Alpha/beta hydrolase family
      0.065   12.8   0.0      0.083   12.5   0.0    1.3  1  PF12695.2  Alpha/beta hydrolase family
      0.094   12.1   0.0       0.17   11.2   0.0    1.4  1  PF00561.15 alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> PF05990.7  Alpha/beta hydrolase of unknown function (DUF900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0     1e-12   3.5e-09      73     234 .]      20     191 ..       9     191 .. 0.81

  Alignments for each domain:
  == domain 1    score: 36.2 bits;  conditional E-value: 1e-12
    PF05990.7  73 aeasrdalekllrylatkksakkihllaHSmGtwlvlealrqlaieade.......paleakikeviLaApDidvdvfkkqleslgkes.keltvyvsrdDraLklSaliegdasRlGaldpdee....reellskgvevvdlskvkesdl.lnhskfasnpevvadfaqllgnr 234
                  +e ++ ++ ++++ l+++ +  ++h + HSmG +++  a + l  +  +         ++ + + + ++ +D  +d f +    l+++   ++tv v + D+aL +S++       lG  d + +     +  +   v+++d +++++    l h++f  n  v++d  +l++ r
  MMETSP1325-20131115|11270_1  20 CERTQIDFCEFIEDLRKA-GLTRVHFVTHSMGARILFAAFERLTPQLATleeqaqgTTGKTIASTITILNADYPRDWFVERDLPLASKYcDRITVTVDTGDQALVVSEFPLWKY--LGFKDASLKvlgkYNDPIDGPVDIIDGTNIDSNMHsLRHNYFNLNSVVIQDLYELITTR 191
                  677888999*******99.******************9999988776666666543333346677889999*******988776665555*****************8744443..7766655554454556677778*********99999*******************9987 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.1e-05     0.036      55      85 ..      26      59 ..      13     145 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 1.1e-05
                 HHHHHHHH--....--EEEE--------HHHHHH CS
    PF12697.2 55 dlaalldalgl...rpvvlvGHSlGgavalaaaa 85
                 d++++++ l+    ++v++v+HS+G+ +  aa +
  MMETSP1325-20131115|11270_1 26 DFCEFIEDLRKaglTRVHFVTHSMGARILFAAFE 59
                 566666666555559***********98876655 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.4e-05     0.083      47      82 ..      28      65 ..       9     165 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.4e-05
    PF12695.2 47 krvlaadll..dleriilvGhSlGGgvalelagrd.drv 82
                  +++ +dl   +l r+++v+hS+G+++ +++ +r  +++
  MMETSP1325-20131115|11270_1 28 CEFI-EDLRkaGLTRVHFVTHSMGARILFAAFERLtPQL 65
                 5555.444446999*************999888443333 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.1e-05      0.17      29      64 ..      26      60 ..      21      62 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.1e-05
                 HHHHHHHHHHHHSTSSSEEEEE-B---HHHHHHHHH CS
   PF00561.15 29 dlardleavldalglkkltlvGhSmGGmialayaae 64
                 d+++++e +++  gl+++++v hSmG++i +a++++
  MMETSP1325-20131115|11270_1 26 DFCEFIEDLRK-AGLTRVHFVTHSMGARILFAAFER 60
                 67777777765.6******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 1018.45
//
Query:       MMETSP1325-20131115|11273_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       428  (0.0313049); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 609.60
//
Query:       MMETSP1325-20131115|11271_1  [L=161]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-39  131.9   3.9      1e-38  131.0   2.2    1.7  2  PF01157.13 Ribosomal protein L21e


Domain annotation for each model (and alignments):
>> PF01157.13  Ribosomal protein L21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   2.2   7.4e-43     1e-38       2      99 .]       3     100 ..       2     100 .. 0.98
   2 ?   -0.8   0.0     0.088   1.2e+03      36      58 ..     124     146 ..     103     149 .. 0.65

  Alignments for each domain:
  == domain 1    score: 131.0 bits;  conditional E-value: 7.4e-43
                  ------TTTTTTTS--CCG-----TCCCC--------EEE---TT-------CCC------B-...TTTB---EECEEE----EEEEEE-CCCEEE-S CS
   PF01157.13   2 kskGkrrrtRkklkrkfRkrGvsplstalkeykeGdivdikingsvqkGmphkafhGktGrvvnvtkgavGvivnkkvkdrilekrinvrieHirpsk 99 
                  +s G+r rtR ++ r+fRk Gv +lst+l+++k+Gd+vdik++++v+kGmp+k +hG+tG+v+nvtk avGv vnk+v++++lekri+vr+eH+ psk
  MMETSP1325-20131115|11271_1   3 HSFGYRARTRDMFCRPFRKSGVIKLSTYLTTFKRGDYVDIKAHAAVHKGMPFKHYHGRTGIVFNVTKRAVGVRVNKEVNGKVLEKRIHVRVEHVIPSK 100
                  688******************************************************************************************98875 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.088
                  ---EEE---TT-------CCC-- CS
   PF01157.13  36 GdivdikingsvqkGmphkafhG 58 
                   ++v +k  + ++k  ++  ++G
  MMETSP1325-20131115|11271_1 124 QEKVSLKRSPILPKPAYFVDYEG 146
                  36677777777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       429  (0.031378); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 771.63
//
Query:       MMETSP1325-20131115|11280_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-09   37.6   0.0    1.7e-09   37.3   0.0    1.1  1  PF01215.14 Cytochrome c oxidase subunit Vb


Domain annotation for each model (and alignments):
>> PF01215.14  Cytochrome c oxidase subunit Vb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   1.2e-13   1.7e-09      31     125 ..      35     129 ..       7     131 .. 0.87

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 1.2e-13
                  -X--------HHHH----HHHHHHHHH----TT--S--B--..---TSS-CEEEESSSCEEE----STT-S.S---EEEETT-EEE-ST---EEEEE CS
   PF01215.14  31 pgakeGevPtDleqatgleRevllaelkgrdafdikaldas..kGtlkdPilvesiddkRivgCtgseaeshtilwltvakkkvarCleCGsvykLk 125
                  ++ ++ e+ +D +q+ g ++ +l  el+g  +f   ++     +Gt+ +Pi v+s   +R+vg ++ ea  h+++w+t+ k+ ++  ++  + +kL+
  MMETSP1325-20131115|11280_1  35 TMNNDHEILSDYDQQGGRRKIELEDELQGVTTFSRDPIMPPlgSGTKANPIEVPSGYSERVVGYECPEA--HQLMWFTMSKGPLHYIPSLDKYFKLV 129
                  4789999****************************998876679**********************875..78**********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.42s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 596.83
//
Query:       MMETSP1325-20131115|11288_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.3   0.0       0.13   12.3   0.0    1.1  1  PF09697.5 Protein of unknown function (Porph_ging)


Domain annotation for each model (and alignments):
>> PF09697.5  Protein of unknown function (Porph_ging)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   9.4e-06      0.13      37      55 ..      12      30 ..       5      32 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 9.4e-06
    PF09697.5 37 eekkerevtAWYtpeipvs 55
                 + +++++ tAW+++++p+s
  MMETSP1325-20131115|11288_1 12 TLSNNERHTAWFCSKVPYS 30
                 56778899*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 158.25
//
Query:       MMETSP1325-20131115|11293_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|11299_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   11.3   0.0       0.22   10.6   0.0    1.3  1  PF07368.6 Protein of unknown function (DUF1487)


Domain annotation for each model (and alignments):
>> PF07368.6  Protein of unknown function (DUF1487)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   1.6e-05      0.22      33      79 ..      29      75 ..      22      87 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 1.6e-05
    PF07368.6 33 egavatvlveesirdefvervrsklkplseevaeHpsylkalekide 79
                  + va+vl  +   +e   ++ +++k + + + eHp + ka++++ +
  MMETSP1325-20131115|11299_1 29 VNRVASVLQLKVTGEEQAMKLDERMKSMTKLMEEHPGFEKAIRNVCK 75
                 5789999999999999999**********************998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       586  (0.0428613); expected 273.4 (0.02)
Passed bias filter:                      556  (0.0406671); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 627.85
//
Query:       MMETSP1325-20131115|11305_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 316.32
//
Query:       MMETSP1325-20131115|11306_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00029   20.2   0.0    0.00032   20.0   0.0    1.0  1  PF13236.1 Clustered mitochondria


Domain annotation for each model (and alignments):
>> PF13236.1  Clustered mitochondria
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.3e-08   0.00032       2      60 ..       2      60 ..       1      64 [. 0.95

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 2.3e-08
    PF13236.1  2 WNeefQalrelpketlqerllrerllskvlsdFveaAtkgakaivdgnilpinpkeeke 60
                 WN  +Q+l+e+  e+ + ++ +  ll+ ++  F ++A+   k++v +  lp   k++++
  MMETSP1325-20131115|11306_1  2 WNHRYQTLLEVKDENSEMSVRKGLLLTSFVGSFLQTAVDICKTLVTEFGLPDALKTIQP 60
                 ***********************************************999998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 285.88
//
Query:       MMETSP1325-20131115|11307_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|11308_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-28   99.0   1.0    1.3e-28   98.7   0.7    1.1  1  PF03645.8 Tctex-1 family


Domain annotation for each model (and alignments):
>> PF03645.8  Tctex-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.7   0.7   9.5e-33   1.3e-28       2     101 ..      58     158 ..      57     159 .. 0.95

  Alignments for each domain:
  == domain 1    score: 98.7 bits;  conditional E-value: 9.5e-33
                  HHHHHHHHHHHHHHHHSS--.-HHHHHHHHHHHHHHHHHHHHCC..T-SCCEEEEEEEEE------EEEEEE-S-TTT---EEEEEESSSEEEEEEEE-EE CS
    PF03645.8   2 kevkeiikevleeaLksvkY.ehekveqwskeiietilkklkelstkkryKyvvnctIvqkggrgmhvasgalWdektDgmvsvkyenkgldvvvtvfava 101
                  ++vk+i+  +le++L+++ Y ++e++++w+++i+e+i+ ++ke  + +ryK++v++t++q +++g++vas++lWd+ tD+++sv y n++l++ +++f+v+
  MMETSP1325-20131115|11308_1  58 SQVKKIAGAILEQELSGKMYdDEEEAKKWNTTICEKIKAEVKEKCNIPRYKLIVQVTLGQMKDQGVRVASRCLWDTATDNYASVDYANQHLWCSAMIFGVY 158
                  689*****************55689*****************98877****************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      456  (0.0333528); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 782.48
//
Query:       MMETSP1325-20131115|11311_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   14.6   0.0       0.15   12.0   0.0    2.1  2  PF00249.26 Myb-like DNA-binding domain
       0.09   12.1   0.1        5.4    6.3   0.0    2.1  2  PF01309.13 Equine arteritis virus small envelope glycoprotein


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.2e-05      0.15      32      48 .]      11      31 ..       3      31 .. 0.84
   2 ?   -0.3   0.0      0.15     1e+03      34      44 ..      35      45 ..      32      48 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.2e-05
                 T....TTS-HHHHHHHHHHHT CS
   PF00249.26 32 g....kgRtlkqcksrwqkyl 48
                 +    +g+t +++ks++qk++
  MMETSP1325-20131115|11311_1 11 PhtegTGLTTEHLKSHLQKFR 31
                 445559*************97 PP

  == domain 2    score: -0.3 bits;  conditional E-value: 0.15
                 TS-HHHHHHHH CS
   PF00249.26 34 gRtlkqcksrw 44
                  R+  +c +++
  MMETSP1325-20131115|11311_1 35 ERSKAECMDHY 45
                 5999******9 PP

>> PF01309.13  Equine arteritis virus small envelope glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0   0.00079       5.4      71     101 ..      39      69 ..      19      86 .. 0.81
   2 ?    3.9   0.0    0.0044        30      36      82 ..     141     192 ..     118     205 .. 0.71

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00079
   PF01309.13  71 pdcfdhlesssyapfinayrqailsqypqel 101
                   +c+dh ess  a f + y      ++  el
  MMETSP1325-20131115|11311_1  39 AECMDHYESSMVASFEQFYDSQAYLKFLSEL 69 
                  68*************9999765555555555 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.0044
   PF01309.13  36 sigqsrlsymlqdwlla...ahrkevmp..snvmpmpgltpdcfdhlesssy 82 
                     q ++s mlq  lla   a + e+    + v p p +   cf+ l  +s 
  MMETSP1325-20131115|11311_1 141 IKTQLQVSMMLQSSLLAkvsAXQLELTRklARVSPPPPIQRSCFEALCCTSM 192
                  4568899********98333455565432368999999******99987664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       422  (0.030866); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.48s 00:00:00.96 Elapsed: 00:00:00.49
# Mc/sec: 1193.29
//
Query:       MMETSP1325-20131115|11312_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-24   83.9   0.1    9.9e-24   83.6   0.1    1.1  1  PF02867.10 Ribonucleotide reductase, barrel domain
  ------ inclusion threshold ------
      0.011   14.8   0.3      0.021   13.8   0.0    1.4  2  PF11560.3  Lamina-associated polypeptide 2 alpha
       0.11   11.6   0.0       0.13   11.4   0.0    1.1  1  PF01523.11 Putative modulator of DNA gyrase


Domain annotation for each model (and alignments):
>> PF02867.10  Ribonucleotide reductase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.6   0.1   2.2e-27   9.9e-24     461     537 .]       2      77 ..       1      77 [. 0.98

  Alignments for each domain:
  == domain 1    score: 83.6 bits;  conditional E-value: 2.2e-27
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF02867.10 461 gsiqdikeipeeikelyktayeidqkklikmaaarqkfidqsiSktlflpedataedlkelylyawklGlKtityYl 537
                  gs+q+i  +pe++k+lykt++ei+q++ ++maa+r+++i+qs+S+++++ +++t+ +l+++++yaw++GlKt++yYl
  MMETSP1325-20131115|11312_1   2 GSVQKIGMVPEDLKQLYKTVWEIKQRTCLDMAADRGAYICQSQSLNVHM-AEPTMGKLTSMHFYAWRKGLKTGMYYL 77 
                  89***********************************************.9*************************6 PP

>> PF11560.3  Lamina-associated polypeptide 2 alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.7e-06     0.021     158     200 ..      29      71 ..       9      76 .. 0.89
   2 ?   -2.0   0.0      0.33   1.5e+03     118     140 ..      83     105 ..      75     115 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.7e-06
                  HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHTTS- CS
    PF11560.3 158 ilsktydaasylceaafdevkmaahamgsatvgrrylwlkdck 200
                   l+ + d  +y+c++   +v+ma  +mg+ t    y w k  k
  MMETSP1325-20131115|11312_1  29 CLDMAADRGAYICQSQSLNVHMAEPTMGKLTSMHFYAWRKGLK 71 
                  567778999*****************************99877 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.33
                  HHHHHHHHHHHHHHHHHHHHHHH CS
    PF11560.3 118 asalqiaahtafvakalqadisq 140
                  a a+q +   ++va++ + + +q
  MMETSP1325-20131115|11312_1  83 ADAIQFTVDQTMVAQSRKQQEAQ 105
                  66777777777777765543333 PP

>> PF01523.11  Putative modulator of DNA gyrase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.8e-05      0.13      31      86 ..      59     119 ..      42     127 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 2.8e-05
   PF01523.11  31 rgvgvrvikdg.kvgfastsdlse.ealkkaieqav.alakasee..eekelpepapeppv 86 
                  +++++ + ++g k+g ++  ++++ +a++ +++q + a+++ ++e  e +e p++ap +p 
  MMETSP1325-20131115|11312_1  59 TSMHFYAWRKGlKTGMYYLRTRPKaDAIQFTVDQTMvAQSRKQQEaqEAAEDPKKAPASPI 119
                  577888999999***7777777776**********97777777776666777776666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       696  (0.050907); expected 273.4 (0.02)
Passed bias filter:                      518  (0.0378877); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|11313_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|11321_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 422.63
//
Query:       MMETSP1325-20131115|11320_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 746.56
//
Query:       MMETSP1325-20131115|11322_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 396.13
//
Query:       MMETSP1325-20131115|11327_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|11328_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   14.8   0.2      0.029   14.3   0.1    1.5  1  PF01590.21 GAF domain


Domain annotation for each model (and alignments):
>> PF01590.21  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   2.1e-06     0.029     109     132 ..      51      74 ..      18      85 .. 0.91

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 2.1e-06
                  EEEEE-BETTEBEEEEEEEESS-. CS
   PF01590.21 109 llavPllargkliGvlvlhnkspg 132
                  +++vP +a+++l+Gv++++n  + 
  MMETSP1325-20131115|11328_1  51 VCVVPAVADQQLLGVICCENQARA 74 
                  5799****************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|11331_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.3   10.0  11.7       0.31   10.0   8.1    1.0  1  PF05477.6  Surfeit locus protein 2 (SURF2)
       0.31   10.0   9.4        0.3   10.1   6.5    1.1  1  PF01056.13 Myc amino-terminal region
       0.59   10.6  12.1       0.56   10.7   7.9    1.4  1  PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
       0.68    8.7  16.0       0.76    8.5  11.1    1.0  1  PF07767.6  Nop53 (60S ribosomal biogenesis)
       0.78    9.1  16.8       0.94    8.8  11.7    1.1  1  PF05764.8  YL1 nuclear protein
       0.85    7.3  17.7       0.89    7.2  12.3    1.0  1  PF04147.7  Nop14-like family
        2.2    7.0   8.8        2.4    6.9   6.1    1.0  1  PF04929.7  Herpes DNA replication accessory factor
        2.2    8.4   9.1        2.5    8.3   6.3    1.2  1  PF09026.5  Centromere protein B dimerisation domain
        2.6    7.4  13.3          3    7.2   9.3    1.1  1  PF11861.3  Domain of unknown function (DUF3381)
        3.1    7.7  11.0        3.4    7.5   7.7    1.1  1  PF14181.1  YqfQ-like protein
        3.4    7.5  10.0        3.9    7.3   6.9    1.1  1  PF11081.3  Protein of unknown function (DUF2890)
        3.6    5.6   8.1        3.8    5.5   5.6    1.0  1  PF05416.7  Southampton virus-type processing peptidase
        3.7    7.0  16.4        4.8    6.7  11.4    1.1  1  PF04889.7  Cwf15/Cwc15 cell cycle control protein
        5.1    7.0  10.2          7    6.6   7.1    1.2  1  PF05395.7  Protein phosphatase inhibitor 1/DARPP-32
        5.2    6.4  11.4        6.1    6.2   7.9    1.2  1  PF04546.8  Sigma-70, non-essential region
        5.3    4.8  16.4        5.9    4.6  11.3    1.0  1  PF02724.9  CDC45-like protein
        6.1    6.1  10.8        6.8    5.9   7.5    1.0  1  PF12230.3  Pre-mRNA splicing factor PRP21 like protein
        6.3    5.8  12.8        7.4    5.5   8.8    1.0  1  PF09468.5  Ydr279p protein family (RNase H2 complex component)
        7.9    5.0   8.0        8.3    5.0   5.6    1.1  1  PF01698.11 Floricaula / Leafy protein
        9.5    4.2   6.0         11    4.0   4.2    1.0  1  PF02480.11 Alphaherpesvirus glycoprotein E


Domain annotation for each model (and alignments):
>> PF05477.6  Surfeit locus protein 2 (SURF2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   8.1   0.00045      0.31     181     234 ..       3      70 ..       1      73 [] 0.59

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.00045
    PF05477.6 181 tkkelekeqdtdeeddFetdde..demeveseeke............qkrskkqseslkkkfkkahkk 234
                  +++e e++  td++dd ++dde  ++ e+esee +            ++++kk+  ++kkk kk+  k
  MMETSP1325-20131115|11331_1   3 RRREEEAAMATDSSDDSSSDDEsdEDSEEESEEVDveaaipgseggkKQQQKKEGRKKKKKGKKKGSK 70 
                  56777778888888888888653366666666666899999876542222244444444444444444 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   6.5   0.00044       0.3     216     259 ..       8      51 ..       1      71 [. 0.46

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00044
   PF01056.13 216 pnsssssgedseseeeeeeeeeeeeeeeiDvvtvekrrsssrek 259
                   ++ ++ ++d  s ++e +e+ eee ee+Dv +     +  +++
  MMETSP1325-20131115|11331_1   8 EAAMATDSSDDSSSDDESDEDSEEESEEVDVEAAIPGSEGGKKQ 51 
                  33334433333323333334445667899996654333322222 PP

>> PF11942.3  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   7.9   0.00082      0.56       8      56 ..      16      66 ..       7      71 .. 0.55

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00082
    PF11942.3  8 vddeeeEeeeeedeeeelseeaefieea....eddrrhreldrrrekeeeeda 56
                 +dd+  ++e++ed eee +e++  +e+a    e ++++ ++++ r+k++++++
  MMETSP1325-20131115|11331_1 16 SDDSSSDDESDEDSEEESEEVD--VEAAipgsEGGKKQQQKKEGRKKKKKGKK 66
                 4444444443333333322221..22224566777777777777777777654 PP

>> PF07767.6  Nop53 (60S ribosomal biogenesis)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  11.1    0.0011      0.76     237     298 ..       6      68 ..       1      72 [. 0.38

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0011
    PF07767.6 237 eeglaeeeddeeeeesedesekegfdsekelsinkpvk.nkrKtkaqRnkekrrkelekeake 298
                  ee +a + d+ ++++s+des+++ +++ +e +++++   ++  +k+q +ke r+k+++ ++k 
  MMETSP1325-20131115|11331_1   6 EEEAAMATDSSDDSSSDDESDEDSEEESEEVDVEAAIPgSEGGKKQQQKKEGRKKKKKGKKKG 68 
                  333333333333333333333222222222334444444555555555555555555544443 PP

>> PF05764.8  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  11.7    0.0014      0.94      53     110 ..       6      67 ..       3      73 .] 0.45

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0014
    PF05764.8  53 eeeeeeeeDsdfddseddeeesddeeegek.ele.........keekekkkkrkkkkaykeplkkkkk 110
                  eee++++ Ds  d+s+dde+++d eee e+ + e         k      k+++kk+ +k++ k kkk
  MMETSP1325-20131115|11331_1   6 EEEAAMATDSSDDSSSDDESDEDSEEESEEvDVEaaipgseggK------KQQQKKEGRKKKKKGKKK 67 
                  55666666887777777755555555544414456665432221......222333333333222222 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  12.3    0.0013      0.89     343     410 ..      11      66 ..       2      73 .] 0.24

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0013
    PF04147.7 343 egvededeeeddddeeeeeedvdedeeeedeedeesddeeeeeeeee........aseeeaeakkkkkktkkkkks 410
                  +  +++d++                 +++de+de+s++e+ee + e+        ++++++++ +   k+kkk k+
  MMETSP1325-20131115|11331_1  11 MATDSSDDS-----------------SSDDESDEDSEEESEEVDVEAaipgseggKKQQQKKEGR---KKKKKGKK 66 
                  222222222.................222222222222222222222333332221111111111...11111111 PP

>> PF04929.7  Herpes DNA replication accessory factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   6.1    0.0035       2.4     314     371 ..      15      67 ..       2      72 .. 0.37

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0035
    PF04929.7 314 sedsspspPktsesdleeeteeeaslsakpsaalerplasslkrkreaekkkkkkksK 371
                  s+d+s+s+ ++s++d+eee+ee  +  a p ++  ++    +++k+e+ kkkkk k+K
  MMETSP1325-20131115|11331_1  15 SSDDSSSD-DESDEDSEEESEEVDVEAAIPGSEGGKK----QQQKKEGRKKKKKGKKK 67 
                  11111111.2344444444444444444444444443....33344444433333333 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   6.3    0.0036       2.5      13      44 ..      12      43 ..       2      60 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0036
    PF09026.5 13 esdseeeeedeeedeededeedeeeddevpvp 44
                  +ds ++   ++e +ed +ee ee d e  +p
  MMETSP1325-20131115|11331_1 12 ATDSSDDSSSDDESDEDSEEESEEVDVEAAIP 43
                 34554444444444445666666666666665 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   9.3    0.0044         3      97     150 ..      14      68 ..       2      72 .. 0.50

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0044
    PF11861.3  97 kekkkekeeeeeeeeveekdeeeqideelk.ellekelakekreerrenerkqke 150
                  +++++ + ++e++e+ ee++ee +++  +   +  k+++++k+ ++++++ k+k 
  MMETSP1325-20131115|11331_1  14 DSSDDSSSDDESDEDSEEESEEVDVEAAIPgSEGGKKQQQKKEGRKKKKKGKKKG 68 
                  2222222444444555555555555544444466666777777777777777664 PP

>> PF14181.1  YqfQ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   7.7     0.005       3.4      95     147 ..      18      67 ..       9      73 .] 0.46

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.005
    PF14181.1  95 lsssdeeteeeeeesteeeekeeeeetktekkekkkkevkkskkekekekeek 147
                   sssd+e +e++ee++ee+++e   + ++     kk+++kk+ ++k+k+ ++k
  MMETSP1325-20131115|11331_1  18 DSSSDDESDEDSEEESEEVDVEAAIPGSE---GGKKQQQKKEGRKKKKKGKKK 67 
                  45556666666666666666666555432...222222222222222222222 PP

>> PF11081.3  Protein of unknown function (DUF2890)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.9    0.0057       3.9      34      83 ..       7      60 ..       2      72 .. 0.44

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0057
    PF11081.3 34 eeeeledw....edSldeedeeaeeveeetaakskapssssksssqetksappr 83
                 ee+++  +      S de+de+ ee++ee+  + ++p s+  +++q++k+  ++
  MMETSP1325-20131115|11331_1  7 EEAAMATDssddSSSDDESDEDSEEESEEVDVEAAIPGSEGGKKQQQKKEGRKK 60
                 444443334443334455555555555555555444444444444444333222 PP

>> PF05416.7  Southampton virus-type processing peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   5.6    0.0055       3.8     194     245 ..      13      67 ..       1      72 [. 0.41

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0055
    PF05416.7 194 vaskpsvghdeevekadlcekeedeeeaeiesk...dakaegkkgknkkgrGkks 245
                  ++s +    d+e ++ ++ e+ee + ea i+ +   +++++ k g++kk++Gkk+
  MMETSP1325-20131115|11331_1  13 TDSSDDSSSDDESDEDSEEESEEVDVEAAIPGSeggKKQQQKKEGRKKKKKGKKK 67 
                  3333333444444444444444444444443321112333334455555555553 PP

>> PF04889.7  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  11.4     0.007       4.8     115     176 ..       6      66 ..       2      72 .. 0.37

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.007
    PF04889.7 115 eeareidaddsdkseeesdesdddsdddddeDetaeLlrEL.....ekiKkeraeekereeeekaae 176
                  ee++++  d+sd+s+ ++desd     +d+e+e +e+  E      e  Kk++++++ r++++k ++
  MMETSP1325-20131115|11331_1   6 EEEAAMATDSSDDSS-SDDESD-----EDSEEESEEVDVEAaipgsEGGKKQQQKKEGRKKKKKGKK 66 
                  444555555543333.333444.....4444444444444400000333333333333333332222 PP

>> PF05395.7  Protein phosphatase inhibitor 1/DARPP-32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   7.1      0.01         7     114     169 ..      11      67 ..       2      71 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.01
    PF05395.7 114 elgqpeeeeeeteaeeseeeessleedsqaev.glegaaektaeesekeqeessedq 169
                    + + +++ +++++++  ee s e d +a + g+eg  ++ +++++++++++++++
  MMETSP1325-20131115|11331_1  11 MATDSSDDSSSDDESDEDSEEESEEVDVEAAIpGSEGGKKQQQKKEGRKKKKKGKKK 67 
                  333444455555555555555555667766656**********99999999999865 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   7.9    0.0089       6.1      37      67 ..       7      50 ..       2      71 .. 0.42

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0089
    PF04546.8 37 eeeeaeeeseddeeeeeddddddededeee...............e 67
                 ee++++++s dd++++++  +d+++e+e+e               +
  MMETSP1325-20131115|11331_1  7 EEAAMATDSSDDSSSDDE--SDEDSEEESEevdveaaipgseggkK 50
                 333333333333333333..22222222222456666664333332 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  11.3    0.0086       5.9     119     180 ..       8      66 ..       1      72 [. 0.30

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0086
    PF02724.9 119 dayealvemkeeeeeesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkr 180
                  +a++a+   + +++++sd++sd++++ee+ee + +     ++  +++++++e ++++++ k+
  MMETSP1325-20131115|11331_1   8 EAAMAT---DSSDDSSSDDESDEDSEEESEEVDVEAAIPGSEGGKKQQQKKEGRKKKKKGKK 66 
                  222222...22222333333333333333333333333322222222222222222222222 PP

>> PF12230.3  Pre-mRNA splicing factor PRP21 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   7.5      0.01       6.8      95     159 ..       7      71 ..       2      73 .] 0.64

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.01
    PF12230.3  95 aleeeeeaaaeeeeeeeeeeedeeeekkeesaeksepkvkemkikaaeesrlkirkdykkkaekk 159
                  +   + +++++++ ++ e  ed eee +e + e + p +++ k++ ++++  k++k+ kkk++kk
  MMETSP1325-20131115|11331_1   7 EEAAMATDSSDDSSSDDESDEDSEEESEEVDVEAAIPGSEGGKKQQQKKEGRKKKKKGKKKGSKK 71 
                  33333444444444555555666666666677777777888888888888899999999998886 PP

>> PF09468.5  Ydr279p protein family (RNase H2 complex component)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.8     0.011       7.4     248     289 ..      17      70 ..       3      72 .. 0.46

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.011
                  XXXXXXXXXXXXXXXXXXXX..............XXXXXXXXXXXXXXXXXXXX CS
    PF09468.5 248 sdlskkreaeedaeaaesra............ekkrkkeeeekkkkakeskgvk 289
                  +d+s++ e++ed e++ +++            +k+++k+e  kkkk++++kg+k
  MMETSP1325-20131115|11331_1  17 DDSSSDDESDEDSEEESEEVdveaaipgseggKKQQQKKEGRKKKKKGKKKGSK 70 
                  333333333333333333334433333335555555555555555555555555 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   5.6     0.012       8.3     137     196 ..       7      67 ..       1      73 [] 0.31

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.012
   PF01698.11 137 eetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkas..kkkqkrk 196
                  ee+a+ + s++ +s + +++e  +  s++  + ea++ ++e  k++++kk+ +  kkk k+k
  MMETSP1325-20131115|11331_1   7 EEAAMATDSSDDSSSDDESDEDSEEESEEVDV-EAAIPGSEGGKKQQQKKEGRkkKKKGKKK 67 
                  33444444444444444444444444433332.22222222211222222211001122222 PP

>> PF02480.11  Alphaherpesvirus glycoprotein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   4.2     0.016        11     404     430 ..       8      63 ..       4      71 .. 0.69

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.016
   PF02480.11 404 l..vedvsedeesedeevdvdeeeeasd...........................k 430
                  +  ++ +s+d++s+d+e+d d+eee+++                           k
  MMETSP1325-20131115|11331_1   8 EaaMATDSSDDSSSDDESDEDSEEESEEvdveaaipgseggkkqqqkkegrkkkkK 63 
                  34566677777888888888888888778899999999999888666665544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1181  (0.0863809); expected 273.4 (0.02)
Passed bias filter:                      649  (0.0474693); expected 273.4 (0.02)
Passed Vit filter:                       153  (0.0111908); expected 13.7 (0.001)
Passed Fwd filter:                        39  (0.00285255); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.49u 0.43s 00:00:00.92 Elapsed: 00:00:00.94
# Mc/sec: 186.10
//
Query:       MMETSP1325-20131115|11332_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 419.36
//
Query:       MMETSP1325-20131115|11335_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.5e-16   58.0   0.0    1.1e-15   57.8   0.0    1.1  1  PF09184.6 PPP4R2
  ------ inclusion threshold ------
      0.079   12.9   0.1        5.9    6.9   0.0    2.7  2  PF13348.1 Tyrosine phosphatase family C-terminal region


Domain annotation for each model (and alignments):
>> PF09184.6  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8   0.0   1.6e-19   1.1e-15      81     134 ..      56     109 ..      20     116 .. 0.89

  Alignments for each domain:
  == domain 1    score: 57.8 bits;  conditional E-value: 1.6e-19
    PF09184.6  81 emkelllkivenFnglPFTiqRlCELltdPfkyYneldKFlrAleKnilVvsti 134
                    k++llk +++F++ PFT+qRl+ELl +P+++Y  + K+++++ K + V+s  
  MMETSP1325-20131115|11335_1  56 SQKATLLKMLDEFEQPPFTLQRLAELLLEPRRQYGSTPKYMNGVLKLLSVSSYL 109
                  56899*********************************************9965 PP

>> PF13348.1  Tyrosine phosphatase family C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0   0.00086       5.9      31      51 ..      37      57 ..      28      68 .. 0.90
   2 ?    3.4   0.0      0.01        72      40      54 ..      87     101 ..      74     112 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00086
    PF13348.1 31 leaaldtideryGsvegYLee 51
                 l+++ld+++++ G+++g++ +
  MMETSP1325-20131115|11335_1 37 LAQVLDAFEKEIGTFDGFASQ 57
                 789***************866 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.01
    PF13348.1  40 eryGsvegYLeeaLG 54 
                  ++yGs   Y+  +L+
  MMETSP1325-20131115|11335_1  87 RQYGSTPKYMNGVLK 101
                  455555555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 592.04
//
Query:       MMETSP1325-20131115|11343_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.61
# Mc/sec: 314.28
//
Query:       MMETSP1325-20131115|11341_1  [L=346]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-17   60.5   0.0    1.3e-16   59.6   0.0    1.3  2  PF00305.14 Lipoxygenase


Domain annotation for each model (and alignments):
>> PF00305.14  Lipoxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.0   9.6e-21   1.3e-16     320     534 ..      30     230 ..      11     234 .. 0.90
   2 ?   -3.5   0.0      0.12   1.7e+03     619     649 ..     295     325 ..     287     332 .. 0.75

  Alignments for each domain:
  == domain 1    score: 59.6 bits;  conditional E-value: 9.6e-21
                  HHHHHHHHHHHHHHHHHHHHCCCHHHHHHH.HHHHHHHHHHHS-TTSHHHHHHGGGCTTHHHHHHHHHHHTSS----CCCCSTTGGGH.HHHHHHHHTT--CGGGSHHHHHHH---EE..TTS....CCTSTT-HHHH---HHHHHHHHHHHHHHHHC-SS.HHHHHC-HHHHHHHHHHHH------TT-TTSSSS-SHHHHHHHHHHHHHHHTHHHH CS
   PF00305.14 320 siWllAKayvrvnDsglHqlisHlLrtHav.vEpfviAtnRqLsvlHPiykllvpHlrdtmeinarAResLinagGiiekafltgkya.velssavykklvftdqalPadlvkRglavedpsaphGvrlliedypyakDgLeiWeaiktwveeyvslyYks.deavkkDeELqawwkevvevGhgdkkdkpwwpklqtreelievltiiiwvasalHa 534
                    W  AK+  r+  ++   l  Hl   H + ++ + +A+       HPi +ll pH+ +t  in++ ++ L+  g +  ++f+ ++ + v+  + v + +v++   lPa l+++gl    ps         ++ p  +D+L++W +i+ +v+ ++  +Y++ d++v  D ++ ++w    +     +   pw     t e l+ +lt +iw+ ++ H 
  MMETSP1325-20131115|11341_1  30 EQWEHAKCAFRSTVTTGLTLNDHLCTVHWIkANGLGMAAREATGPDHPIRRLLKPHYYNTALINVKSKDMLLPVGQFAYRTFAFTETSwVQYFTDVSAGWVYE--PLPAKLASKGL----PS------AFFDSWPLGQDALKLWYTIEAYVKAFLGPFYPNgDDDVLADGDVVDFWASFET-----QFGTPWNLPPLTMETLTTLLTELIWTVTGEHE 230
                  3499999999999999999999999999773677899999999999****************************9999**********9*************6..79*********....44......46799**********************999975499************98754.....445799999999******************96 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 0.12
                  S-HHHHHHHHHHHHHHHHHHHHHHHHHTTCC CS
   PF00305.14 619 sdkeakealkrFrkklkeiekkieernkdes 649
                  +++++++a++ F+ +l+e+ ++ ++ n++++
  MMETSP1325-20131115|11341_1 295 QQQSVLDAVRGFQVSLAELADQNDHDNQERT 325
                  5677899999999999999998888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.35s 00:00:01.01 Elapsed: 00:00:00.69
# Mc/sec: 1201.65
//
Query:       MMETSP1325-20131115|11348_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.59
# Mc/sec: 219.33
//
Query:       MMETSP1325-20131115|11352_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       671  (0.0490784); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.59
# Mc/sec: 389.92
//
Query:       MMETSP1325-20131115|11356_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-07   29.2   0.0    5.3e-07   29.2   0.0    1.1  1  PF08190.7  pre-RNA processing PIH1/Nop17
    0.00025   21.4   0.0    0.00035   20.9   0.0    1.1  1  PF04969.11 CS domain


Domain annotation for each model (and alignments):
>> PF08190.7  pre-RNA processing PIH1/Nop17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   7.7e-11   5.3e-07     265     320 ..      39      98 ..       6      99 .] 0.92

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 7.7e-11
    PF08190.7 265 ieieLPgvksvaevdLrvsedrllleveke....kYrLdlkLpypvdeeeaeAkFnkkkk 320
                  + + LP+++s+a+v+L+v  + + l +e +    +Y L+l+L  +vd  +++Ak++kk++
  MMETSP1325-20131115|11356_1  39 MIVRLPRLESAADVQLDVAPRAFKLRAEIPgeesEYALSLELGSTVDPASSRAKWKKKES 98 
                  5689*********************999888888***********************986 PP

>> PF04969.11  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   5.2e-08   0.00035      11      70 ..      36      96 ..      33      98 .. 0.91

  Alignments for each domain:
  == domain 1    score: 20.9 bits;  conditional E-value: 5.2e-08
                 EEEEEEE-------S-EEEEE----EEEEE---.....EEE---BSS-EEEEEEEEEE--- CS
   PF04969.11 11 eVtitipvkgvikkedvkveikkkslkvsikgpge.keyllegeLfgeIdpeesswkiedt 70
                  V++ + ++  +++ dv+ ++ ++ +k+    pge +ey l++eL + +dp +s+ k +++
  MMETSP1325-20131115|11356_1 36 VVIMIVRLPRLESAADVQLDVAPRAFKLRAEIPGEeSEYALSLELGSTVDPASSRAKWKKK 96
                 588889999999********************999899*****************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 456.23
//
Query:       MMETSP1325-20131115|11357_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|11358_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.076   13.0   0.0      0.093   12.8   0.0    1.1  1  PF03799.10 Cell division protein FtsQ


Domain annotation for each model (and alignments):
>> PF03799.10  Cell division protein FtsQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.8e-06     0.093      16      69 ..       5      53 .]       3      53 .] 0.76

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 6.8e-06
   PF03799.10 16 eGevfeaeaaeeddlpllsgpegsekevlalyrelaallaelrlkiselelspr 69
                 +Gevf + +++      l ++++s++ +l+ y++l +++  l+ ++s+++l++r
  MMETSP1325-20131115|11358_1  5 HGEVFDKVTEA----NELLNQDNSSR-ALEIYDDLLSIPGGLNKQVSKVVLTNR 53
                 68888774443....23444455555.7***********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.64
# Mc/sec: 198.45
//
Query:       MMETSP1325-20131115|11365_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.56
# Mc/sec: 340.53
//
Query:       MMETSP1325-20131115|11366_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 293.89
//
Query:       MMETSP1325-20131115|11361_1  [L=397]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.69u 0.35s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 1865.40
//
Query:       MMETSP1325-20131115|11372_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.3e-21   73.5   4.6    3.8e-18   64.8   1.1    2.3  2  PF04588.8 Hypoxia induced protein conserved region


Domain annotation for each model (and alignments):
>> PF04588.8  Hypoxia induced protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   1.1   2.8e-22   3.8e-18       3      53 ..       6      56 ..       5      57 .. 0.95
   2 !   11.9   0.1   8.9e-06      0.12      12      41 ..      53      83 ..      52      83 .. 0.85

  Alignments for each domain:
  == domain 1    score: 64.8 bits;  conditional E-value: 2.8e-22
    PF04588.8  3 enplvpiGclatagalllglynmkrGnsktsqklmRaRvaaQgfTvaalva 53
                 + plvpiGcl+t g+l+ gly +  G+   sqk+mRaR++aQg+Tv++l  
  MMETSP1325-20131115|11372_1  6 QDPLVPIGCLLTGGVLGGGLYTLYTGQAGLSQKFMRARILAQGVTVVVLCT 56
                 57*********************************************9965 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 8.9e-06
    PF04588.8 12 latagalllglynmk.rGnsktsqklmRaRv 41
                 ++++g + lg+ +mk ++     qk+mR R+
  MMETSP1325-20131115|11372_1 53 VLCTGTVMLGNEAMKgGPRETLEQKMMRERM 83
                 5789***********55588899*****985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       449  (0.0328408); expected 273.4 (0.02)
Passed bias filter:                      315  (0.0230398); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 524.20
//
Query:       MMETSP1325-20131115|11376_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 464.89
//
Query:       MMETSP1325-20131115|11382_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-28   94.9   7.0      1e-13   50.4   0.0    3.0  3  PF00400.27 WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.045   13.0   1.1       0.89    8.7   0.2    2.0  2  PF10647.4  Lipoprotein LpqB beta-propeller domain
      0.049   11.8   0.0      0.055   11.6   0.0    1.1  1  PF02239.11 Cytochrome D1 heme domain
      0.056   11.5   0.5        1.9    6.4   0.1    2.1  2  PF11715.3  Nucleoporin Nup120/160
      0.083   11.5   0.2       0.19   10.3   0.1    1.6  1  PF08801.6  Nup133 N terminal like


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.4    0.0096        26      32      39 .]       3      10 ..       2      10 .. 0.92
   2 !   42.7   0.3     1e-14   2.8e-11       4      39 .]      17      52 ..      14      52 .. 0.96
   3 !   50.4   0.0   3.7e-17     1e-13       4      38 ..      60      94 ..      57      95 .. 0.96

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0096
                 TSEEEEEE CS
   PF00400.27 32 DgtirlWd 39
                 D+++++Wd
  MMETSP1325-20131115|11382_1  3 DKKVKVWD 10
                 9******9 PP

  == domain 2    score: 42.7 bits;  conditional E-value: 1e-14
                 EEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27  4 katlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 +atl+gH s+V+ va+s d++ll+s+S+D+t ++Wd
  MMETSP1325-20131115|11382_1 17 IATLTGHVSAVYQVAWSTDSRLLISASKDSTAKVWD 52
                 789********************************9 PP

  == domain 3    score: 50.4 bits;  conditional E-value: 3.7e-17
                 EEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEE CS
   PF00400.27  4 katlrgHtspVtcvafspdgpllasgSrDgtirlW 38
                 ++tl gH + V+++++sp+g+ +a+gS+D+ti++W
  MMETSP1325-20131115|11382_1 60 LHTLPGHADEVYALDWSPNGNQVATGSKDRTIKIW 94
                 79********************************* PP

>> PF10647.4  Lipoprotein LpqB beta-propeller domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.2   0.00033      0.89     155     187 ..      14      46 ..       9      55 .. 0.77
   2 ?    3.3   0.0     0.015        40     156     189 ..      58      92 ..      54      95 .. 0.71

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00033
    PF10647.4 155 tlplelapnlleevtslaWlsddslvVlgrkag 187
                  ++ + ++++  ++v ++aW +d++l++ ++k  
  MMETSP1325-20131115|11382_1  14 GAFIATLTGHVSAVYQVAWSTDSRLLISASKDS 46 
                  5556777888899**************987643 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.015
    PF10647.4 156 lplelapnlleevtslaWlsd.dslvVlgrkaggp 189
                  ++l+++p+ ++ev +l+W  + +++++++++++ +
  MMETSP1325-20131115|11382_1  58 AALHTLPGHADEVYALDWSPNgNQVATGSKDRTIK 92 
                  56788899999999999997515666666665555 PP

>> PF02239.11  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     2e-05     0.055      16      71 ..       4      59 ..       2      87 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2e-05
                 --EEEE-----SEEEEE-------EEEE---.--EEEEE---SEEEEEETTSSSEE CS
   PF02239.11 16 gkvalidgdskeilavlesgyalHisrvfasdgRyvyvigRDgkltliDLwakeiv 71
                  kv++ dg +   +a+l ++      +  + d R++  +++D++ ++ DL + +  
  MMETSP1325-20131115|11382_1  4 KKVKVWDGRTGAFIATLTGHVSAVYQVAWSTDSRLLISASKDSTAKVWDLKKPKAA 59
                 689*****************9999999999********************998844 PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0016       4.4     240     274 ..       3      33 ..       1      37 [. 0.77
   2 ?    6.4   0.1   0.00068       1.9     221     258 ..      30      62 ..      20      93 .. 0.67

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0016
    PF11715.3 240 DgkLRvWnletgqclrttdileaaellpadslsyi 274
                  D+k++vW+ +tg+ ++t +      + + ++++++
  MMETSP1325-20131115|11382_1   3 DKKVKVWDGRTGAFIATLTGH----VSAVYQVAWS 33 
                  9*************9998877....5555555555 PP

  == domain 2    score: 6.4 bits;  conditional E-value: 0.00068
    PF11715.3 221 ldvsssevegqtfvftlsrDgkLRvWnletgqclrttd 258
                  ++ s+    ++ ++++ s D + +vW+l+  +  ++ +
  MMETSP1325-20131115|11382_1  30 VAWST----DSRLLISASKDSTAKVWDLKKPKA-ALHT 62 
                  44445....888999*************98887.3333 PP

>> PF08801.6  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   6.9e-05      0.19     187     220 ..      23      55 ..      11      95 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 6.9e-05
    PF08801.6 187 eqeteivqlridssrrilytlsskgtirvwdlsp 220
                  +++  + q++++  +r+l+++s ++t +vwdl++
  MMETSP1325-20131115|11382_1  23 HVSA-VYQVAWSTDSRLLISASKDSTAKVWDLKK 55 
                  5455.99*************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       270  (0.0197484); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.53
# Mc/sec: 434.06
//
Query:       MMETSP1325-20131115|11377_1  [L=454]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-17   62.9   0.1    2.7e-17   62.3   0.1    1.3  1  PF04564.10 U-box domain
    6.7e-05   22.2   0.0    0.00014   21.2   0.0    1.4  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
     0.0021   17.1   0.0     0.0021   17.1   0.0    3.5  3  PF13202.1  EF hand
     0.0069   15.7   0.0      0.015   14.7   0.0    1.5  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
      0.013   14.6   0.0      0.013   14.6   0.0    3.5  3  PF00036.27 EF hand
       0.06   13.1   1.2      0.096   12.4   0.8    1.3  1  PF02932.11 Neurotransmitter-gated ion-channel transmembrane region
       0.19   11.5   0.1       0.19   11.5   0.1    3.9  5  PF13405.1  EF-hand domain


Domain annotation for each model (and alignments):
>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   0.1   1.4e-20   2.7e-17       2      72 ..     139     209 ..     138     210 .. 0.98

  Alignments for each domain:
  == domain 1    score: 62.3 bits;  conditional E-value: 1.4e-20
                  -GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHHCC CS
   PF04564.10   2 PdefldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKekIdkfleekk 72 
                  P+ +++pi  ++m  Pv+++ g+t++ ++i+++l++ +  dP+t+  l+   l+ n +l+ +I+++ +++k
  MMETSP1325-20131115|11377_1 139 PEAYVCPIYQTMMVHPVMTSAGHTYEYAAIKQWLEKGHTKDPMTNLELKTTVLTQNHALRSMIQQWRQDNK 209
                  99**********************************999****************************9987 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   7.4e-08   0.00014      11      57 ..     142     180 ..     136     181 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 7.4e-08
                  -B-TTT-S.-SS....EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
    PF13445.1  11 faCpiske.qsteqnpPvvLpCGhvisrealeklakggrsnkgrfkCP 57 
                   +Cpi +  +      Pv+   Gh+++  a+++++++     g+ k+P
  MMETSP1325-20131115|11377_1 142 YVCPIYQTmMVH----PVMTSAGHTYEYAAIKQWLEK-----GHTKDP 180
                  59******9977....*******************94.....477777 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.013        26       9      16 ..      36      43 ..      36      47 .. 0.89
   2 !   17.1   0.0   1.1e-06    0.0021       4      23 ..      48      67 ..      45      70 .. 0.88
   3 ?   -7.1   4.9         7   1.4e+04      11      14 ..     387     390 ..     385     396 .. 0.66

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.013
                 --S----B CS
    PF13202.1  9 DlNgDGkI 16
                 D++gDG++
  MMETSP1325-20131115|11377_1 36 DADGDGTV 43
                 9*****98 PP

  == domain 2    score: 17.1 bits;  conditional E-value: 1.1e-06
                 HHHHH--S----B-HHHHHH CS
    PF13202.1  4 tFrafDlNgDGkIsreELkr 23
                 + +++D+++DG++  +EL r
  MMETSP1325-20131115|11377_1 48 VVQQVDTDRDGTVELDELWR 67
                 569***************87 PP

  == domain 3    score: -7.1 bits;  conditional E-value: 7
                  S--- CS
    PF13202.1  11 NgDG 14 
                  +gDG
  MMETSP1325-20131115|11377_1 387 DGDG 390
                  5555 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   7.5e-06     0.015      13      50 ..     143     178 ..     138     188 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7.5e-06
                  B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT--B- CS
    PF11789.3  13 kCpltlkpfkePvtskkCnHvFEkeaIlkmlkrkkkvk 50 
                  +Cp+ +  + +Pv      H++E  aI + l++ + +k
  MMETSP1325-20131115|11377_1 143 VCPIYQTMMVHPVMT-SAGHTYEYAAIKQWLEKGH-TK 178
                  7************86.569************5444.43 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.023        44      10      19 ..      36      45 ..      35      50 .. 0.84
   2 ?   14.6   0.0   6.7e-06     0.013       1      24 [.      44      67 ..      44      71 .. 0.86
   3 ?   -4.5   2.4         7   1.4e+04      10      15 ..     385     390 ..     384     392 .. 0.70

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.023
                 CTTTSSEBEH CS
   PF00036.27 10 DkDgdGkIsf 19
                 D DgdG++++
  MMETSP1325-20131115|11377_1 36 DADGDGTVEL 45
                 99*****986 PP

  == domain 2    score: 14.6 bits;  conditional E-value: 6.7e-06
                 HHHHHHHHHCTTTSSEBEHHHHHH CS
   PF00036.27  1 elkeaFkefDkDgdGkIsfeEfke 24
                 el ++ + +D+D+dG+++++E+ +
  MMETSP1325-20131115|11377_1 44 ELLDVVQQVDTDRDGTVELDELWR 67
                 57788899*************965 PP

  == domain 3    score: -4.5 bits;  conditional E-value: 7
                  CTTTSS CS
   PF00036.27  10 DkDgdG 15 
                  D DgdG
  MMETSP1325-20131115|11377_1 385 DSDGDG 390
                  677777 PP

>> PF02932.11  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.8   4.9e-05     0.096      64     211 ..      71     216 ..      65     223 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 4.9e-05
                  HHHHHHHHHHHHHHHHHHHHHH--.---------------------------------------------------------....----------.--------------------------------.--------------------- CS
   PF02932.11  64 ftmivvtllieiavvvlnvhhrsp.rthkmpewvrrvfldklprllfmkrpstakqnqakknesakksanssrleselgkepkksqvkvkvkegsg.aetstsekksasskgeseaelspelkkavegv.syiaqhlraededksvkedwk 211
                     ++v+ +i+i v  ++++ r   + +k++e+ ++v+ +  ++ l +   + + ++ ++k++s+ ++a+ +  + +  +++  ++v++ +++  + a  ++  +k++++++ ++ el++ + ++ ++  s i+q+ ++++++    e+w 
  MMETSP1325-20131115|11377_1  71 SNYMLVIQVIMIGVSGYIMKRRDSwSRKKAQEAAEEVV-RVKAQAL-EAARQIKAEADEAKKPSTATEAPPEAYVCPIYQTMMVHPVMTSAGHTYEyAAIKQWLEKGHTKDPMTNLELKTTVLTQNHALrSMIQQWRQDNKTN---AEQWP 216
                  5679999*****************99999999999998.4444444.677777777777778888888888889999999999999888777655415556667777777777777777666666666625666666655555...55565 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.017        33       9      23 ..      34      49 ..      32      52 .. 0.80
   2 ?   11.5   0.1   9.8e-05      0.19       2      24 ..      45      67 ..      44      71 .. 0.85
   3 ?   -1.4   0.0       1.4   2.6e+03       6      20 ..     268     282 ..     268     286 .. 0.83
   4 ?   -3.3   0.0       5.8   1.1e+04       6      20 ..     318     332 ..     317     335 .. 0.73
   5 ?   -5.9   2.3         7   1.4e+04      10      14 ..     387     391 ..     385     392 .. 0.49

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.017
                 C.-------B---HHH CS
    PF13405.1  9 f.DkdgdGkidaeELr 23
                 + D dgdG++++ +++
  MMETSP1325-20131115|11377_1 34 YkDADGDGTVELLDVV 49
                 559*******998876 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 9.8e-05
                 HH---GCC-------B---HHHH CS
    PF13405.1  2 lreaFklfDkdgdGkidaeELrd 24
                 l ++ ++ D+d+dG+++++EL +
  MMETSP1325-20131115|11377_1 45 LLDVVQQVDTDRDGTVELDELWR 67
                 66788899************955 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 1.4
                  -GCC-------B--- CS
    PF13405.1   6 FklfDkdgdGkidae 20 
                  F   D+  dG +d +
  MMETSP1325-20131115|11377_1 268 FAYADHSSDGAWDSD 282
                  7778999***99976 PP

  == domain 4    score: -3.3 bits;  conditional E-value: 5.8
                  -GCC-------B--- CS
    PF13405.1   6 FklfDkdgdGkidae 20 
                  F  + + +dG +d +
  MMETSP1325-20131115|11377_1 318 FANHSRFRDGAWDSD 332
                  666767789999865 PP

  == domain 5    score: -5.9 bits;  conditional E-value: 7
                  ----- CS
    PF13405.1  10 Dkdgd 14 
                  D dgd
  MMETSP1325-20131115|11377_1 387 DGDGD 391
                  44555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       743  (0.0543446); expected 273.4 (0.02)
Passed bias filter:                      464  (0.033938); expected 273.4 (0.02)
Passed Vit filter:                        60  (0.00438853); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.92u 0.39s 00:00:01.31 Elapsed: 00:00:00.60
# Mc/sec: 1813.24
//
Query:       MMETSP1325-20131115|11386_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 427.59
//
Query:       MMETSP1325-20131115|11388_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       259  (0.0189438); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.59
# Mc/sec: 223.39
//
Query:       MMETSP1325-20131115|11389_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|11390_1  [L=124]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 606.43
//
Query:       MMETSP1325-20131115|11398_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       120  (0.00877706); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 367.10
//
Query:       MMETSP1325-20131115|11398_2  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|11396_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-09   36.6   3.7      3e-09   36.1   2.6    1.2  1  PF01062.16 Bestrophin, RFP-TM, chloride channel


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   2.6   2.2e-13     3e-09     193     278 ..       3     106 ..       1     109 [. 0.90

  Alignments for each domain:
  == domain 1    score: 36.1 bits;  conditional E-value: 2.2e-13
   PF01062.16 193 lkaldeelnelrealggleridwtpiPlaYtqlvhlavylyflllpfglqd..................eldlvtplltvlqfyffvglekvaeeLenPFGedd 278
                  + +++++l elr ++++     + p PlaY  ++++++ + ++++pf+l +                   +  +t    ++  +ff gl+ +a+ L  PFGe+ 
  MMETSP1325-20131115|11396_1   3 CVQFQKHLMELRGSMATFVFLTQFPTPLAYAHMLQMLTDFICCACPFALMYeidtlvvtkagytqhepwATMPLTMAGIFFTTFFFQGLLSLAKALHSPFGERM 106
                  67899************************************************************85554444555556788899****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 776.21
//
Query:       MMETSP1325-20131115|11401_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 221.20
//
Query:       MMETSP1325-20131115|11405_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.021   13.0   2.1      0.023   12.9   1.4    1.0  1  PF07888.6 Calcium binding and coiled-coil domain (CALCOCO1) like
       0.11   12.3   0.5       0.16   11.8   0.4    1.4  1  PF09025.5 YopR Core
       0.61   10.1   4.4       0.69    9.9   3.0    1.1  1  PF12720.2 Protein of unknown function (DUF3807)


Domain annotation for each model (and alignments):
>> PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.4   4.9e-06     0.023     189     257 ..      10      79 ..       4      95 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 4.9e-06
    PF07888.6 189 eLkekykeissseeeiseerniLsaqraenrerileLeddiqtlskkvreqeklleqlke.ikaelerek 257
                    ++++kei++++eei   r +  a+ a++++   eL ++i+ l+    ++ek+l ++ e  ka+  ++k
  MMETSP1325-20131115|11405_1  10 RAMQRVKEIQTRREEIYYKRRMKDAKSAQRVAEKVELKQNIEILAPAAADKEKVLLNIAEkAKAKNATKK 79 
                  56899************************************************98776551455544444 PP

>> PF09025.5  YopR Core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   3.6e-05      0.16      67     105 ..      36      74 ..      11      87 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.6e-05
    PF09025.5  67 pvepaiDrpeLrallrefdplgaqrekvLlevlaelksl 105
                  +++  +++ eL++ ++  +p +a +ekvLl++ ++ k  
  MMETSP1325-20131115|11405_1  36 SAQRVAEKVELKQNIEILAPAAADKEKVLLNIAEKAKAK 74 
                  456667899***********************9988865 PP

>> PF12720.2  Protein of unknown function (DUF3807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.0   0.00015      0.69      63     130 ..       9      81 ..       7      99 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00015
    PF12720.2  63 ihaLlRerelkeeeeeaeeegevdsskkeaakasesskeek.......ekekekakakkkkkrdkkkknakeklr 130
                  ++a++R +e +  +ee+  +++++  k+++ +a++ + +++       +   +k+k   + +++ k+kna++k r
  MMETSP1325-20131115|11405_1   9 LRAMQRVKEIQTRREEIYYKRRMKDAKSAQRVAEKVELKQNieilapaA--ADKEKVLLNIAEKAKAKNATKKGR 81 
                  689*********9999********9999999999998888887877541..223332333333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1265  (0.0925249); expected 273.4 (0.02)
Passed bias filter:                      657  (0.0480544); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.54
# Mc/sec: 443.77
//
Query:       MMETSP1325-20131115|11409_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|11410_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.30s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 784.26
//
Query:       MMETSP1325-20131115|11415_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.16   11.4   2.0       0.27   10.7   1.4    1.3  1  PF02809.15 Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> PF02809.15  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.4     2e-05      0.27       7      16 ..      30      39 ..      29      40 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 2e-05
                 HHHHHHHHHH CS
   PF02809.15  7 LqlALalSle 16
                 L++AL+lSl+
  MMETSP1325-20131115|11415_1 30 LARALELSLQ 39
                 9********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      165  (0.0120685); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 336.41
//
Query:       MMETSP1325-20131115|11413_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-18   66.0   0.0    3.6e-18   65.5   0.0    1.3  1  PF00620.22 RhoGAP domain
    8.5e-05   22.8   0.0    0.00025   21.3   0.0    1.8  1  PF00786.23 P21-Rho-binding domain


Domain annotation for each model (and alignments):
>> PF00620.22  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5   0.0   5.2e-22   3.6e-18       9     149 ..     112     243 ..     103     247 .. 0.88

  Alignments for each domain:
  == domain 1    score: 65.5 bits;  conditional E-value: 5.2e-22
                  HHHHHH-TT-TTTTSS---HHHHHHHHHHHHH----S.CCCSS-HHHHHHHHHHHHHHSSS-TT-GGHHHHHHHHHCCSHGGGHHHHHHHHHCTS-HHHHHHHHHHHHHHHHHHCTHHHH---HHHHHHHHHHHHCT-STT CS
   PF00620.22   9 efiekrgldtegiyRvsgsksrvkelreafergkavdedleeedvhavasvLKrfLrelpepLltkelyeelleaaksedeeerlealkellekLpkenretLryLlehLkrvaenseenkMtaenLaivfaPtLlrpkss 149
                  + ie++g d++gi+R+  +++ ++ +++++++g+ +    +  dv+++a+++K ++r++p  Ll     e+++++a+       +e++ + ++++ ++  +++ +Ll+++ +v  n+++nkM+a+n++iv++P+L + +s+
  MMETSP1325-20131115|11413_1 112 KLIENNGRDQVGIFRLAPDRDDCDFVKDQINSGTFE----HVDDVNVIANLIKVWFRDMPSGLLNTIDDETIYKIADL-----PTEEVPSEYHQFAEPTKSLFLWLLDLMAEVVTNEAVNKMSAKNMSIVLSPNLYQINSE 243
                  56999*****************************87....5889********************99777777765444.....4556777888999***************************************998765 PP

>> PF00786.23  P21-Rho-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   3.6e-08   0.00025       5      33 ..      51      79 ..      50      92 .. 0.94

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 3.6e-08
                 -EEEEEEEEEEEBTTTTBEE---HHHCCC CS
   PF00786.23  5 PtdfkHvaHVGfdgqsgfftglppewkkl 33
                 P++  H++HV+ + ++  ++glp+ew+++
  MMETSP1325-20131115|11413_1 51 PSNLSHQVHVTYNEFNARYEGLPEEWAHM 79
                 99************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 1412.32
//
Query:       MMETSP1325-20131115|11422_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-12   44.8   0.0    1.5e-10   40.6   0.0    2.5  3  PF00382.14 Transcription factor TFIIB repeat
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.15   11.5   0.0    1.2  1  PF07905.6  Purine catabolism regulatory protein-like family


Domain annotation for each model (and alignments):
>> PF00382.14  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.0   2.2e-14   1.5e-10      21      70 ..       2      51 ..       1      52 [. 0.92
   2 ?   -1.1   0.0      0.22   1.5e+03       3      14 ..      58      69 ..      54      71 .. 0.82
   3 ?    1.2   0.0     0.044     3e+02       1      19 [.      78      96 ..      78      98 .] 0.79

  Alignments for each domain:
  == domain 1    score: 40.6 bits;  conditional E-value: 2.2e-14
                 HHHHHSSS-S-----SHHHHTTTTT---TTTTSS--HHHHHHSSS--SS- CS
   PF00382.14 21 laklaleekllkGrspesiaAAclyiAcrleevkrtlkeiasvaqVsekt 70
                 l+  a+++++++Gr+   ++A clyi cr+e+ +++l+++++ + +++ t
  MMETSP1325-20131115|11422_1  2 LFTVAVQRNFVQGRKTMHVVAVCLYIVCRKEKSPHMLIDFSDSLSINVFT 51
                 677899************************************99998766 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.22
                 HHHHHTT--HHH CS
   PF00382.14  3 rfadaLeLpkkV 14
                 +f+  L+L +++
  MMETSP1325-20131115|11422_1 58 KFCRLLNLEEQI 69
                 689999998876 PP

  == domain 3    score: 1.2 bits;  conditional E-value: 0.044
                 HHHHHHHTT--HHHHTHHH CS
   PF00382.14  1 ikrfadaLeLpkkVadaAk 19
                 i rfa +++L +k +  A+
  MMETSP1325-20131115|11422_1 78 IHRFAGRMDLGNKTQTVAQ 96
                 789********97776664 PP

>> PF07905.6  Purine catabolism regulatory protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.2e-05      0.15      60     105 ..       7      52 ..       3      65 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.2e-05
    PF07905.6  60 elreyvrelaeagvaGLviklgryleevpeeliaaAeelglPliel 105
                   +r++v+  +  +v++++++++   e+ p  li++ ++l + +++l
  MMETSP1325-20131115|11422_1   7 VQRNFVQGRKTMHVVAVCLYIVCRKEKSPHMLIDFSDSLSINVFTL 52 
                  589*******************7777**************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|11425_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|11426_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-16   60.4   0.1    1.6e-16   60.0   0.1    1.0  1  PF05907.8 Eukaryotic protein of unknown function (DUF866)


Domain annotation for each model (and alignments):
>> PF05907.8  Eukaryotic protein of unknown function (DUF866)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.1   1.2e-20   1.6e-16      86     158 ..      10      83 ..       3      85 .. 0.92

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 1.2e-20
    PF05907.8  86 ltledsekkktivvfdCRglEivefspragwkaeaaesgtkf..eeidlsekdwvdydekaeesvgieeleseik 158
                  +t +ds++   i+ f+CRglE++++ p++++ +e++  gt+f  ++++ +++ w+dyd  ++ +v+ie+le++++
  MMETSP1325-20131115|11426_1  10 MTEDDSDEWVGIICFECRGLEPIQYIPKNDFSIEST-GGTTFnsDDVEFEDGVWADYDGENDMPVSIENLEADLR 83 
                  7889999*****************************.9**995569*************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 548.50
//
Query:       MMETSP1325-20131115|11428_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.077   12.7   0.0      0.084   12.6   0.0    1.2  1  PF11905.3 Domain of unknown function (DUF3425)
       0.12   11.4   0.0        7.4    5.5   0.1    2.1  2  PF06576.6 Protein of unknown function (DUF1133)


Domain annotation for each model (and alignments):
>> PF11905.3  Domain of unknown function (DUF3425)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.2e-05     0.084      24      50 ..      43      70 ..      26     113 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.2e-05
    PF11905.3 24 rPtplQltipHhpw.iDllpwPklRdrL 50
                    ++Ql+i H+ w +D l w +l +rL
  MMETSP1325-20131115|11428_1 43 VQMASQLQIMHPQWlMDNLNWVELQERL 70
                 56799*********99********9998 PP

>> PF06576.6  Protein of unknown function (DUF1133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0    0.0028        19      46      70 ..      10      36 ..       6      43 .. 0.81
   2 ?    5.5   0.1    0.0011       7.4     134     150 ..      43      59 ..      39      71 .. 0.86

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0028
    PF06576.6 46 fnqllaskkltkta..vnealrrlkka 70
                 +  +l+s+k+t t+  v +al ++kk+
  MMETSP1325-20131115|11428_1 10 YADFLSSGKVTPTTdeVCDALGEIKKS 36
                 66789*****99865599*******98 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0011
    PF06576.6 134 rkmaeelnakhpewsls 150
                   +ma +l+  hp+w + 
  MMETSP1325-20131115|11428_1  43 VQMASQLQIMHPQWLMD 59 
                  68************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.50
# Mc/sec: 565.54
//
Query:       MMETSP1325-20131115|11427_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 833.93
//
Query:       MMETSP1325-20131115|11437_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-10   40.8   0.2    1.3e-10   40.8   0.2    1.6  2  PF04212.13 MIT (microtubule interacting and transport) domain
     0.0019   17.9   0.7      0.055   13.2   0.6    2.3  2  PF13424.1  Tetratricopeptide repeat
      0.002   18.2   1.3     0.0033   17.4   0.9    1.3  1  PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
  ------ inclusion threshold ------
      0.045   13.6   0.1      0.085   12.7   0.0    1.4  1  PF12688.2  Tetratrico peptide repeat
        0.1   12.3   0.1       0.15   11.8   0.1    1.2  1  PF05168.9  HEPN domain


Domain annotation for each model (and alignments):
>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       2.1   5.7e+03       4      12 ..       9      17 ..       6      25 .. 0.54
   2 !   40.8   0.2   4.8e-14   1.3e-10       2      68 ..      35      99 ..      34     100 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 2.1
                 HHHHHHHHH CS
   PF04212.13  4 kAlelikkA 12
                 +A+e + +A
  MMETSP1325-20131115|11437_1  9 EAKEAAAEA 17
                 455555554 PP

  == domain 2    score: 40.8 bits;  conditional E-value: 4.8e-14
                 HHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHCTTHHCHHH.HHHHHHHHHHHHHHHHHH CS
   PF04212.13  2 lskAlelikkAveaDeagkyeeAlelYkeAlelLlqalkyepnperrea.lrqkieeylkrAeelkel 68
                 ++++  ++ +A+e De+g+ e+Al lY +A++ +l+a+k     ++++   r+++ e l+r+e +k++
  MMETSP1325-20131115|11437_1 35 HDQGRLYLEQALELDEQGRSEDALPLYMNAVQQYLEAMKLS---RQEDGpTRARVVEVLDRIEAIKNM 99
                 7888999********************************88...44455589**************85 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.6     2e-05     0.055      39      76 ..      31      68 ..       6      70 .. 0.90
   2 !    5.4   0.0    0.0055        15      24      52 ..      64      93 ..      61     102 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2e-05
    PF13424.1 39 gddhpdtaralnnlanlylalgdydeAleylekAleia 76
                 g +h+d  r++++ a  + ++g+ ++Al+++  A++ +
  MMETSP1325-20131115|11437_1 31 GSEHHDQGRLYLEQALELDEQGRSEDALPLYMNAVQQY 68
                 6799999***********************99988876 PP

  == domain 2    score: 5.4 bits;  conditional E-value: 0.0055
    PF13424.1 24 Alelyekalel.lrelgddhpdtaralnnl 52
                 A + y +a++l ++e g++ ++++ +l  +
  MMETSP1325-20131115|11437_1 64 AVQQYLEAMKLsRQEDGPTRARVVEVLDRI 93
                 88899******99999***99999998776 PP

>> PF07941.6  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.9   1.2e-06    0.0033      41      69 ..      12      40 ..       3      46 .. 0.78

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1.2e-06
                 XXHHHHSSXSXXXXXXXXXXXXXXSXXXX CS
    PF07941.6 41 aaavaaataaveGeGGsGGGagvnaqtrq 69
                  aa+ aa ++ eG+ G GGG++++ q r 
  MMETSP1325-20131115|11437_1 12 EAAAEAAGSSNEGKSGGGGGSEHHDQGRL 40
                 45566688899***********9998775 PP

>> PF12688.2  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.1e-05     0.085       5      39 ..      42      76 ..      38      78 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.1e-05
    PF12688.2  5 feragarDstGeeakAvplYrrAlaaGLagarrrr 39
                  e+a   D  G+++ A+plY +A ++ L++++  r
  MMETSP1325-20131115|11437_1 42 LEQALELDEQGRSEDALPLYMNAVQQYLEAMKLSR 76
                 5888899*******************999988766 PP

>> PF05168.9  HEPN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   5.4e-05      0.15       5      68 ..      35      98 ..      32     106 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 5.4e-05
                 HHHHHHHHHHH--------HHHHHHHHHHHHHHHH---TTT----.-----HHHHHHTS-TT.. CS
    PF05168.9  5 lerAeedleaAkelleegdydiacfhaqqaaekalKAlllkkggeppkthdlreLleelkkelk 68
                  ++++ +le+A el e+g+ ++a+  +  a++ +l A+ l++  + p+   + e l +++  ++
  MMETSP1325-20131115|11437_1 35 HDQGRLYLEQALELDEQGRSEDALPLYMNAVQQYLEAMKLSRQEDGPTRARVVEVLDRIEAIKN 98
                 5788889**********************************************99998887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 488.31
//
Query:       MMETSP1325-20131115|11438_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       87  (0.00636337); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|11441_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                      104  (0.00760679); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.40s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 198.94
//
Query:       MMETSP1325-20131115|11455_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|11457_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.021   14.9   0.1      0.041   13.9   0.1    1.5  2  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1     3e-06     0.041      68     103 ..       5      39 ..       1      40 [. 0.88
   2 ?   -2.2   0.0      0.31   4.3e+03      38      46 ..      67      75 ..      47      88 .. 0.54

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3e-06
                  SSSEEEEEETTTCEEEEEESSHHHHHHHHHHHHHHH CS
   PF00169.24  68 snnyfeitfkdvesyllsaeseeerkrWvqalknll 103
                   ++ f + + ++ ++ l+ e+ e++++W+q l +++
  MMETSP1325-20131115|11457_1   5 PPHAFDVCTIER-EWTLCSENHEDMQTWLQILTRVI 39 
                  689999999999.*****************998876 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.31
                 TCECSECEE CS
   PF00169.24 38 ksykapkgs 46
                 k++++ +++
  MMETSP1325-20131115|11457_1 67 KNDYSTRMK 75
                 334444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.42s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 435.70
//
Query:       MMETSP1325-20131115|11460_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|11461_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-06   28.0   0.0      2e-06   27.4   0.0    1.3  1  PF00168.25 C2 domain


Domain annotation for each model (and alignments):
>> PF00168.25  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   1.5e-10     2e-06       5      84 ..      41     121 ..      37     122 .. 0.78

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 1.5e-10
                  EEEESS--S-STSSSS-EEEEEEEECTTEEE........EEE--BSS-SSEEEEEEEEEEESCGGGTE.EEEEEEECHSSSCSEE---E CS
   PF00168.25   5 vieAknLpnkdkngtsdpyvkvslggakskk........krTrvikntlnPvWnekftfevvaeelae.leleVkdedrfgkddflGea 84 
                  +++++ L       + +p+v++ l  +   +         ++rv+  +++P W e+f+++ +  +  + l++eV ++++ +  + +G a
  MMETSP1325-20131115|11461_1  41 LLRGDALA------KRNPFVVMRLRHEST-SdgtssrikVKSRVKVGQNSPEWAETFEMD-PLSSWGDvLKIEVRHQKTTSGEEKIGGA 121
                  44444444......578999999999655.234567777*********************.66666667***********999999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.33s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 852.04
//
Query:       MMETSP1325-20131115|11462_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-29  102.9   6.3      2e-29  102.4   4.4    1.2  1  PF00566.13 Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> PF00566.13  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4   4.4   1.5e-33     2e-29      89     211 ..       3     126 ..       1     129 [. 0.95

  Alignments for each domain:
  == domain 1    score: 102.4 bits;  conditional E-value: 1.5e-33
   PF00566.13  89 YcqGmnfiaallLlvvldeeeafwcfvsLl.nkklrdlfkpslpglqrdlqileellkkhdpelykhlekeeldlslfaikWfltlfvrelpletvlrlwD.lflegakflllrialailkllrk 211
                  Y+qGm++++a+lLl+++d  e+f cf +Ll +  + d+++ ++++l+ +++++e+ +k  +p ly+ +++++++++++ ++W ltl+v++lpl++v r+wD ++l g+ f ++r al ilkl+ k
  MMETSP1325-20131115|11462_1   3 YVQGMSYLVATLLLYMEDAFECFTCFANLLnQPFCFDIYRLKQEQLDLHIKTFEHFFKLNLPALYQLFKRHDVEPMIYYLDWALTLYVKCLPLDVVARVWDsYLLLGEAF-CIRTALGILKLFGK 126
                  ******************************999999*****************************************************************777788867.*********99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.57
# Mc/sec: 760.22
//
Query:       MMETSP1325-20131115|11468_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 195.26
//
Query:       MMETSP1325-20131115|11476_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|11483_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       74  (0.00541252); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 325.90
//
Query:       MMETSP1325-20131115|11484_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.32s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 615.43
//
Query:       MMETSP1325-20131115|11488_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-05   24.0   0.0    1.8e-05   23.9   0.0    1.2  1  PF00069.20 Protein kinase domain
  ------ inclusion threshold ------
       0.05   12.6   0.0       0.05   12.5   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   2.6e-09   1.8e-05     150     189 ..      25      64 ..       1      65 [] 0.79

  Alignments for each domain:
  == domain 1    score: 23.9 bits;  conditional E-value: 2.6e-09
                  EESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHH CS
   PF00069.20 150 ksseklttlvgtreYmAPEvllkakeytkkvDvWslGvil 189
                  ++ ++lt+  gt ++ APE++ k+      +DvW+lG+ l
  MMETSP1325-20131115|11488_1  25 NQMGQLTKTEGTYYFFAPEMCTKGAFNAYVCDVWALGICL 64 
                  556789999****************************987 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.3e-06      0.05     161     195 ..      29      64 ..      11      65 .] 0.79

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.3e-06
                  ESTT-EECGGGS-HHHHHHSEEEHH.HHHHH---HH CS
   PF07714.12 161 kkeeaklpvkWmapEslkekkftsk.sDvWsfGvll 195
                  + ++++  + ++apE+ +++ f+    DvW+ G++l
  MMETSP1325-20131115|11488_1  29 QLTKTEGTYYFFAPEMCTKGAFNAYvCDVWALGICL 64 
                  455667778899*********987538*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 278.15
//
Query:       MMETSP1325-20131115|11489_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-05   24.3   0.0      4e-05   23.7   0.0    1.5  1  PF12796.2  Ankyrin repeats (3 copies)
    0.00019   20.9   0.4      0.001   18.6   0.1    2.2  2  PF00023.25 Ankyrin repeat
    0.00054   20.2   0.0    0.00094   19.5   0.0    1.4  1  PF13637.1  Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.017   15.2   0.0    1.3  1  PF13857.1  Ankyrin repeats (many copies)
      0.048   13.7   0.0       0.29   11.3   0.0    2.1  2  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   1.4e-08     4e-05      33      68 ..       2      37 ..       1      78 [. 0.76

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 1.4e-08
    PF12796.2 33 AaeagnleivklLleagadvnakdkegntpLhlAvr 68
                 Aa+ gn++ ++ L+e+ga+vn ++ eg t+  +A r
  MMETSP1325-20131115|11489_1  2 AADVGNHQLCRTLVEHGANVNVQSSEGFTAYGYARR 37
                 999***************************999855 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   3.8e-07     0.001       9      32 ..       2      25 ..       1      26 [. 0.92
   2 ?    0.7   0.0      0.18   4.8e+02      15      26 ..      60      71 ..      27      78 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 3.8e-07
                 HHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25  9 AalrgnlevvklLlsqGAdlnaqd 32
                 Aa  gn++ ++ L+++GA++n+q 
  MMETSP1325-20131115|11489_1  2 AADVGNHQLCRTLVEHGANVNVQS 25
                 8889*****************995 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.18
                 HHHHHHHHHTTS CS
   PF00023.25 15 levvklLlsqGA 26
                 ++ v+ Ll  GA
  MMETSP1325-20131115|11489_1 60 TKTVETLLRVGA 71
                 567888888777 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.4e-07   0.00094      12      41 ..       6      35 ..       1      41 [. 0.89

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 3.4e-07
    PF13637.1 12 grlelvklLlekgidinrtdesGntaLhiA 41
                 g+++l++ L+e+g+++n + ++G+ta  +A
  MMETSP1325-20131115|11489_1  6 GNHQLCRTLVEHGANVNVQSSEGFTAYGYA 35
                 99***********************96665 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   6.3e-06     0.017      23      56 .]       2      35 ..       1      35 [. 0.89

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 6.3e-06
    PF13857.1 23 AakggalevvrlLlapgadlnlrdsdgltaldlA 56
                 Aa  g+ +++r L+++ga+ n++ s+g ta+ +A
  MMETSP1325-20131115|11489_1  2 AADVGNHQLCRTLVEHGANVNVQSSEGFTAYGYA 35
                 666677789999*******************998 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00011      0.29       9      29 ..       2      22 ..       1      23 [. 0.93
   2 ?   -0.4   0.0      0.66   1.8e+03      15      26 ..      60      71 ..      51      74 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00011
    PF13606.1  9 AasngrielveaLlengadin 29
                 Aa  g+ +l++ L+e+ga++n
  MMETSP1325-20131115|11489_1  2 AADVGNHQLCRTLVEHGANVN 22
                 88999***************9 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.66
    PF13606.1 15 ielveaLlenga 26
                 ++ ve Ll+ ga
  MMETSP1325-20131115|11489_1 60 TKTVETLLRVGA 71
                 578899998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 374.70
//
Query:       MMETSP1325-20131115|11491_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 378.62
//
Query:       MMETSP1325-20131115|11492_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.011   15.7   1.0      0.014   15.4   0.7    1.2  1  PF08581.5 Tup N-terminal
      0.062   13.0   0.0      0.082   12.6   0.0    1.1  1  PF06103.6 Bacterial protein of unknown function (DUF948)


Domain annotation for each model (and alignments):
>> PF08581.5  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.7     2e-06     0.014      16      65 ..      22      71 ..      15      84 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 2e-06
    PF08581.5 16 lsreassykaqkedyelkiqqqiqEleqirqtvyeLeqahrkikekYeee 65
                 l r+ +++ +qk+ +e ++ q+ +E++ +rq+    + + r+i ++Ye +
  MMETSP1325-20131115|11492_1 22 LLRKYEKLLTQKQRLEADLYQKSNEMASVRQSAARQQAEDREIIDAYERR 71
                 556666777799************************************86 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.2e-05     0.082      38      77 ..      15      54 ..      10      57 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.2e-05
    PF06103.6 38 ltkqvdgitketeellaktnelleDvneKvetldpvfqav 77
                 + ++ d ++++ e+ll++ ++l  D+ +K++++ +v q++
  MMETSP1325-20131115|11492_1 15 VPTDPDDLLRKYEKLLTQKQRLEADLYQKSNEMASVRQSA 54
                 56778999*************************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       963  (0.0704359); expected 273.4 (0.02)
Passed bias filter:                      709  (0.0518578); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.44s 00:00:00.87 Elapsed: 00:00:00.62
# Mc/sec: 363.32
//
Query:       MMETSP1325-20131115|11490_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-35  121.3   0.0    2.8e-35  121.2   0.0    1.0  1  PF00227.21 Proteasome subunit


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.0     2e-39   2.8e-35       6     190 .]       3     182 ..       1     182 [. 0.91

  Alignments for each domain:
  == domain 1    score: 121.2 bits;  conditional E-value: 2e-39
                  BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHH.TSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEEE CS
   PF00227.21   6 tvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrs.grrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknvevavi 190
                  tv+Gikg+++ ++aad+ + ++ +++++s  +Ki ++d h +++ +G + D+ +++e++++++ ly+l+++ ++s+     + a+ ++++++++ +++p+ +++l++g+de+ g +ly +d+  ++  + n+ a+G++s+++ ++++++yk+ +++eea++++ k++ e++ r  +s+ n+ ++++
  MMETSP1325-20131115|11490_1   3 TVLGIKGDGFTLIAADRTSARSIMVFNQS-EDKITELDSHKIIGQSGPQCDTANFAEYIQKNMTLYELNNDMKLSTF----ATANFMRRQLATAlRKGPYQTNILLGGFDENAGASLYFLDMYSALTPV-NFGAHGYASNFCLSIFDREYKDGMSVEEAKDVIDKCIAELHTRFLISQPNFLIKIV 182
                  9***************6666666665555.5**********************************************....55666666665554449*******************************.8**********************************************999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 915.41
//
Query:       MMETSP1325-20131115|11499_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-08   33.9   0.4    1.7e-08   33.9   0.3    1.0  1  PF00520.26 Ion transport protein
  ------ inclusion threshold ------
      0.045   13.3   0.3       0.05   13.2   0.2    1.1  1  PF04341.7  Protein of unknown function, DUF485
        6.5    6.2   6.2        7.1    6.1   3.6    1.6  2  PF06624.7  Ribosome associated membrane protein RAMP4


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.3   3.7e-12   1.7e-08      74     144 ..       1      65 [.       1      67 [] 0.90

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 3.7e-12
                  XXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-----S-SSSS-----TTT-S--------HHHHH CS
   PF00520.26  74 rllsrieglrtllislirsvkallnvlllllfvlfifaiigvqlfggklrkkcvkekagenpnngntnfdt 144
                  rll++i+g++++l +l  s+ +  +v +l+++vlfifa ig+ +f+++++         + +++++tnf +
  MMETSP1325-20131115|11499_1   1 RLLTLIPGTEPFLLALKVSMGSVYYVSVLFAIVLFIFAAIGCVIFEESAKA------IYTPEIQQSTNFLS 65 
                  7999*******************************************9863......35678888888866 PP

>> PF04341.7  Protein of unknown function, DUF485
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   1.1e-05      0.05      34      82 ..       5      54 ..       2      62 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.1e-05
    PF04341.7 34 llvafapellgtklaeG.aitvgillglgqfvltflltglYvrrAnrefD 82
                 l+ + +p ll+ k++ G +  v +l+++++f+++ + + ++   A+  + 
  MMETSP1325-20131115|11499_1  5 LIPGTEPFLLALKVSMGsVYYVSVLFAIVLFIFAAIGCVIFEESAKAIYT 54
                 566778999********9999*******************9999887655 PP

>> PF06624.7  Ribosome associated membrane protein RAMP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       0.4   1.8e+03      38      45 ..      10      17 ..       8      25 .. 0.72
   2 ?    6.1   3.6    0.0016       7.1      40      56 ..      30      46 ..      15      47 .. 0.86

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.4
    PF06624.7 38 gpilLglF 45
                  p+lL+l 
  MMETSP1325-20131115|11499_1 10 EPFLLALK 17
                 58888874 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.0016
    PF06624.7 40 ilLglFiFVViGSaifq 56
                 + ++lFiF  iG +if+
  MMETSP1325-20131115|11499_1 30 FAIVLFIFAAIGCVIFE 46
                 5699************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       683  (0.0499561); expected 273.4 (0.02)
Passed bias filter:                      470  (0.0343768); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.62
# Mc/sec: 258.96
//
Query:       MMETSP1325-20131115|11498_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-27   92.2   2.7    1.2e-26   91.8   1.9    1.1  1  PF01248.21 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family


Domain annotation for each model (and alignments):
>> PF01248.21  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.8   1.9   8.9e-31   1.2e-26       1      94 [.      28     122 ..      28     123 .. 0.98

  Alignments for each domain:
  == domain 1    score: 91.8 bits;  conditional E-value: 8.9e-31
                  HHHHHHHHHHHHHTEEE---HHHHHHHHH-TECEEEEETTTSSGGHHCHHHHHHHHTTEEEEEESTTTTHHHHHHHTST.-SEEEECE-TTCTTH CS
   PF01248.21   1 daleeklkkalktgklvlGlkevtkalergeaklviiAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrp.vsalaikdegdskdl 94 
                  dal+e+lkkal++++l +Gl+e++kal++++akl+ +A+d++ +e++kl+ alc+e +v++v v+  k+LGe++g++++  ++ a+k++++s+ +
  MMETSP1325-20131115|11498_1  28 DALKEVLKKALVHDGLSRGLHECAKALDKHTAKLCCLAKDCDNPEYTKLVRALCEEGGVNLVMVDTGKQLGEWCGLCKIdEEGEATKVVRCSCAV 122
                  689*****************************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       564  (0.0412522); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 728.89
//
Query:       MMETSP1325-20131115|11503_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|11496_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.1   0.0       0.14   11.8   0.0    2.2  2  PF02258.11 Shiga-like toxin beta subunit
      0.087   12.5   2.1       0.36   10.6   0.1    2.5  2  PF03768.10 Attacin, N-terminal region


Domain annotation for each model (and alignments):
>> PF02258.11  Shiga-like toxin beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     2e-05      0.14      28      65 ..      21      58 ..       8      62 .. 0.92
   2 ?   -3.6   0.1       1.4   9.5e+03      14      26 ..     225     237 ..     224     239 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2e-05
                 -EEEE--TTHHHHHHHHHH---EEEEE-S--------- CS
   PF02258.11 28 kelftsrwnlqslllsaqltGmtvtikssacesGsGfa 65
                 kel t+++ + s ++sa ++G  + +k++  e+ +Gfa
  MMETSP1325-20131115|11496_1 21 KELVTDKYFVLSKFKSAAVAGGPIDVKTEVSEKKGGFA 58
                 9************************************8 PP

  == domain 2    score: -3.6 bits;  conditional E-value: 1.4
                  EE-TTS-EEEEE- CS
   PF02258.11  14 kyneddtftvkvd 26 
                  k+n d  f  k d
  MMETSP1325-20131115|11496_1 225 KFNADGQFKAKYD 237
                  8999999988865 PP

>> PF03768.10  Attacin, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   5.3e-05      0.36      19      65 ..     117     160 ..     103     162 .. 0.84
   2 ?    0.6   0.1     0.066   4.5e+02      27      52 ..     251     276 ..     237     278 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 5.3e-05
   PF03768.10  19 lplagvgknvlsaiGgVfaagntklgpvtaGlaldvNanGHGlsLtk 65 
                  ++    g+++l a   V a + +k  ++taG+++++   + G+ +++
  MMETSP1325-20131115|11496_1 117 CT---YGNDTLFAGLKVTAGDSLKYKSATAGATMAYDGIRVGAQISH 160
                  44...47899999999********************99999999887 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.066
   PF03768.10  27 nvlsaiGgVfaagntklgpvtaGlal 52 
                  +++ ++GgV        +  t+Gla+
  MMETSP1325-20131115|11496_1 251 PKVTVVGGVGIPVAGGASGMTTGLAV 276
                  789999**999999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 1422.52
//
Query:       MMETSP1325-20131115|11509_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 315.31
//
Query:       MMETSP1325-20131115|11510_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-41  139.6   0.0    9.2e-41  139.0   0.0    1.3  1  PF00227.21 Proteasome subunit
    2.9e-14   51.9   0.1    4.5e-14   51.3   0.1    1.3  1  PF10584.4  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.0   0.0   1.4e-44   9.2e-41       1     189 [.      31     217 ..      31     218 .. 0.97

  Alignments for each domain:
  == domain 1    score: 139.0 bits;  conditional E-value: 1.4e-44
                  HHC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEE.TTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEE CS
   PF00227.21   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvd.eeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknvevav 189
                  v++++t++Gi++ dgvvl+++k +   skll+k   + i  i++h gmaf+G  +D r+lv+rar ea++y+ +yg+ i++ +l++r++++++  t+++  rpfg+++++a +  e ++ qly+i+psG  ++  + +a G+g++ akt +ekl    lt  +a++ + ++++ ++++ k ++ ++e+ +
  MMETSP1325-20131115|11510_1  31 VENSGTSIGIRCVDGVVLGVEKVLL--SKLLKKGANKQIATISEHSGMAFSGFGPDSRQLVNRARDEAHSYEDTYGSAIPPNVLAERMSQYVHYFTLHGALRPFGTGAIVAAYEpERKEHQLYMIEPSGVNFRF-YGCALGKGRQGAKTEIEKLDLNTLTCRQALKEVARIIHILHDEAKDKPFELELSW 217
                  67889****************9999..***************************************************************************************777889**************.8*****************************************9999999988876 PP

>> PF10584.4  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.1   6.6e-18   4.5e-14       1      23 []       8      30 ..       8      30 .. 0.99

  Alignments for each domain:
  == domain 1    score: 51.3 bits;  conditional E-value: 6.6e-18
                 T---TT--------HHHHHHHHH CS
    PF10584.4  1 YDrslTtFSPdGRLfQVEYAlkA 23
                 YD+s TtFSP+GR+fQVEYA+kA
  MMETSP1325-20131115|11510_1  8 YDLSPTTFSPEGRIFQVEYATKA 30
                 9*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1039  (0.0759947); expected 273.4 (0.02)
Passed bias filter:                      633  (0.046299); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.37s 00:00:01.03 Elapsed: 00:00:00.54
# Mc/sec: 1167.11
//
Query:       MMETSP1325-20131115|11511_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   12.2   0.1      0.096   12.1   0.1    1.1  1  PF14273.1 Domain of unknown function (DUF4360)


Domain annotation for each model (and alignments):
>> PF14273.1  Domain of unknown function (DUF4360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1     7e-06     0.096      88     135 ..      14      61 ..       8      92 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 7e-06
    PF14273.1  88 vtgtlkatyyfsqdaaktettqkslsgplngvytkedsvdtasevwsa 135
                  + gt ++t +  ++++++et+++ +sg++ g+y+ e   d++  v+sa
  MMETSP1325-20131115|11511_1  14 SEGTGQSTRKVERFESSGETSRSGMSGEYTGDYDSETTSDIERRVVSA 61 
                  578999****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 537.85
//
Query:       MMETSP1325-20131115|11515_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.6    9.8   5.2       0.67    9.6   0.4    2.1  2  PF02840.10 Prp18 domain
        1.4    8.8   8.3        1.7    8.4   5.7    1.3  1  PF13195.1  Protein of unknown function (DUF4011)


Domain annotation for each model (and alignments):
>> PF02840.10  Prp18 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2     0.017   1.2e+02      23      64 ..      40      80 ..      26      91 .. 0.63
   2 ?    9.6   0.4   9.7e-05      0.67      32      76 ..     132     187 ..      99     192 .. 0.73

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.017
   PF02840.10 23 ekksaegkkaeailkqtkkslkpLlkklrkkkleedilesla 64
                 e++    k+a++ ++  k+s +++lkk+ + +++ed+ ++l 
  MMETSP1325-20131115|11515_1 40 EREMEMRKQASQKFAGMKNSKNKMLKKISE-NMPEDVATKLN 80
                 233444555566666666666677777754.56777777765 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 9.7e-05
   PF02840.10  32 a...........eailkqtkkslkpLlkklrkkkleedileslaeivkllqereyv 76 
                  a           ++i  q ++++k  ++kl ++kl++ i+++ ++iv   qe++ +
  MMETSP1325-20131115|11515_1 132 AeavpqdvdprhAQITPQEREEMKEAMSKLSRNKLHDHIFAEEMKIVGKNQEENAN 187
                  0233444555557889999****************************999998865 PP

>> PF13195.1  Protein of unknown function (DUF4011)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.7   0.00026       1.7      15     112 ..      57     156 ..      44     188 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.00026
    PF13195.1  15 kksks.aleleved.pdeledllaegkslrflplpekekedeeeeldkaekaaraleelkkeeaeeeleadkelqtlltpeelekrlrklyrkartleeE 112
                  k+sk+  l+ + e+ p++++ +l e+ +   +++p+ ++ +e+e+l+k +  + a++e+kk+ea+e+ +++k+ +++  p++ + r +++  + r+  +E
  MMETSP1325-20131115|11515_1  57 KNSKNkMLKKISENmPEDVATKLNENAPEFQFKKPNFDDPAERERLEKYKAGKMARKEAKKNEADEDASDRKRRRAEAVPQDVDPRHAQITPQEREEMKE 156
                  555553444444447*******98855544455799998999999999999999*********9999989999998888888888888887776665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1558  (0.113956); expected 273.4 (0.02)
Passed bias filter:                      614  (0.0449093); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 889.42
//
Query:       MMETSP1325-20131115|11516_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.033   13.3   0.1      0.039   13.1   0.1    1.1  1  PF12388.3 Dual-action HEIGH metallo-peptidase


Domain annotation for each model (and alignments):
>> PF12388.3  Dual-action HEIGH metallo-peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   2.8e-06     0.039     102     151 ..       3      53 ..       1      59 [. 0.88

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.8e-06
    PF12388.3 102 GsGgsaGfPdskGdPakfvqiydlensstnvnehviahei..GhsiGfrhtd 151
                   +G++aG P+ +  P++ v+++++ + ++   e  ++he+  Gh  G r  d
  MMETSP1325-20131115|11516_1   3 SAGRVAGRPT-RAAPTRVVGLHGPVRRGVGDRERELSHEVhdGHVEGDRDDD 53 
                  57*******6.568*************************9889999988777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 474.57
//
Query:       MMETSP1325-20131115|11519_1  [L=287]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-05   22.5  10.2    8.3e-05   21.0   7.1    1.6  1  PF04906.8 Tweety
     0.0086   13.5   0.1      0.013   12.9   0.0    1.2  1  PF05478.6 Prominin


Domain annotation for each model (and alignments):
>> PF04906.8  Tweety
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   7.1   1.2e-08   8.3e-05     196     386 ..      36     252 ..      11     264 .. 0.76

  Alignments for each domain:
  == domain 1    score: 21.0 bits;  conditional E-value: 1.2e-08
    PF04906.8 196 dlviClllllglarkskcllivvlvlgllalvlsWaslglelasavgasDfCvs.P........dkyvvkqtkeelv.......sdilqyylsCsqsrtnpFqqrLtesqkaltemqeqveellrsavee.fptae.........kkllaiqellnsternlhqLtAlldcrslhkdYlealrGlCydgleGllylllfsllaalllsilvcsvpra 386
                  + v  ++  lg++ k+ +ll + ++ g+la+++  +++++el+ +v ++D+Cv  P        d +   +tk  ++       +d++ yy+sC+ +++ p   + +   + +++   +++el+   +   ++            + + ++++    ++ +l qLt l  c  l  ++++    lC+d +  l  l  +  +aa+ l i +++++  
  MMETSP1325-20131115|11519_1  36 LSVFAAFGWLGIMCKAPALLNLASFWGILAMLVIVLLIAVELSLSVMLADLCVYgPalgtieatDVFSSAVTKLGVNfnigaipTDVALYYMSCDAAHPIPTSYSPQAITNLMASQAATLKELEVLDQDFaYRCGSegsgkavrdELMASMKANTVAANHTLVQLTELESCEPLYEQWVAFEGALCKDMVDALWQLWAVHAVAAVFLYIALYITSYV 252
                  445667778899999999**********************************843422222222556666665544466677779*************999988777777777777777777754433321221112223344434456788888889999******************99999*************************99998765 PP

>> PF05478.6  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   1.9e-06     0.013     743     788 ..     203     248 ..     177     254 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.9e-06
    PF05478.6 743 vgrCkPlsnivdsavvavCsyivdplNgfWlglglclllllPsiil 788
                  + +C+Pl++   + + a+C+++vd+l  +W+  ++++++l  ++++
  MMETSP1325-20131115|11519_1 203 LESCEPLYEQWVAFEGALCKDMVDALWQLWAVHAVAAVFLYIALYI 248
                  669*******************************999999777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       618  (0.0452019); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 1297.65
//
Query:       MMETSP1325-20131115|11523_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 374.17
//
Query:       MMETSP1325-20131115|11524_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0098   15.6   0.3      0.014   15.1   0.2    1.3  1  PF09744.4  JNK_SAPK-associated protein-1
  ------ inclusion threshold ------
      0.024   14.2   0.5       0.03   13.9   0.3    1.2  1  PF07926.7  TPR/MLP1/MLP2-like protein
      0.025   14.7   2.3      0.025   14.7   1.6    1.7  2  PF06005.7  Protein of unknown function (DUF904)
       0.12   11.7   0.5       0.19   11.0   0.3    1.2  1  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.2   4.1e-06     0.014      84     124 ..      72     112 ..      31     124 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 4.1e-06
    PF09744.4  84 EdeleqekkelekkieeleeevrqlelkaknlsdkvsrLee 124
                  E  + +  ++ + +i+ele+++r+lel+ k l+++  rL e
  MMETSP1325-20131115|11524_1  72 EGSATGPGRDWSGEIAELESNNRKLELRSKELEEENRRLRE 112
                  6677788899999**************************98 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.3   8.9e-06      0.03      72     128 ..      58     114 ..      33     118 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 8.9e-06
    PF07926.7  72 qkeaselrkeadsakaelneleekweeeksmLevelselekkieelneqNklLhsql 128
                   k+ s+  + a++ + +     ++w+ e ++Le ++++le + +el+e+N+ L + l
  MMETSP1325-20131115|11524_1  58 AKSSSKAAAAAEASEGSATGPGRDWSGEIAELESNNRKLELRSKELEEENRRLREAL 114
                  455666777777777777888899**************************9997766 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.3   4.5e+03       4      16 ..      36      48 ..      34      51 .. 0.67
   2 ?   14.7   1.6   7.3e-06     0.025      26      53 ..      85     112 ..      83     122 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHH CS
    PF06005.7  4 elleeLeskiqqA 16
                 +ll++L +++ ++
  MMETSP1325-20131115|11524_1 36 DLLKKLITRVRRT 48
                 6777777777766 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 7.3e-06
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    PF06005.7  26 eieeLkeeneqlkeeneeLeeenkklke 53 
                  ei+eL+++n +l+   +eLeeen +l+e
  MMETSP1325-20131115|11524_1  85 EIAELESNNRKLELRSKELEEENRRLRE 112
                  9*************************97 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3   5.7e-05      0.19      25      51 ..      85     111 ..      81     116 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 5.7e-05
   PF04977.10  25 eiaalqaelaklkaeneeLeaevkdLk 51 
                  eia+l+ ++ kl+ + +eLe+e ++L+
  MMETSP1325-20131115|11524_1  85 EIAELESNNRKLELRSKELEEENRRLR 111
                  8*********************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       604  (0.0441779); expected 273.4 (0.02)
Passed bias filter:                      484  (0.0354008); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 681.32
//
Query:       MMETSP1325-20131115|11526_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 294.29
//
Query:       MMETSP1325-20131115|11527_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0045   16.1   0.3     0.0058   15.8   0.2    1.1  1  PF00520.26 Ion transport protein


Domain annotation for each model (and alignments):
>> PF00520.26  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.2   4.3e-07    0.0058       5      23 ..      30      48 ..      27      50 .. 0.91

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 4.3e-07
                 XXXXXXXXXXXXXXXXXXX CS
   PF00520.26  5 vftiiftlemllkiialgf 23
                 +ft++ft+e+++ki+a+gf
  MMETSP1325-20131115|11527_1 30 MFTTVFTFECIVKIVAMGF 48
                 79****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|11528_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-06   26.9   0.0      4e-06   26.7   0.0    1.1  1  PF00307.26 Calponin homology (CH) domain


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   2.9e-10     4e-06       2      47 ..      28      73 ..      27      80 .. 0.89

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 2.9e-10
                 HHHHHHHHHHHTTSTCTSSHSHHHHHTCTSHHHHHHHHHHSTTSSS CS
   PF00307.26  2 dallrWinkvlekleqsrqvenlskdlsDGvaLaallhkycpdlvd 47
                 + +++W+n +l + +++  v++l++d++DG ++ all+ ++ ++++
  MMETSP1325-20131115|11528_1 28 KVFTNWVNFKLMNRDDNIMVTDLFEDIKDGFVMHALLEELSGQSLR 73
                 789********999889***********************998764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       476  (0.0348157); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 340.53
//
Query:       MMETSP1325-20131115|11534_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.8e-63  210.9   1.8      1e-62  210.7   1.2    1.0  1  PF03248.8 Rer1 family
  ------ inclusion threshold ------
       0.14   11.2   2.7       0.21   10.6   1.9    1.2  1  PF09973.4 Predicted membrane protein (DUF2208)


Domain annotation for each model (and alignments):
>> PF03248.8  Rer1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.7   1.2   1.5e-66     1e-62      13     175 ..       2     158 ..       1     160 [. 0.92

  Alignments for each domain:
  == domain 1    score: 210.7 bits;  conditional E-value: 1.5e-66
    PF03248.8  13 kyqslldkttpyvleRWlalavllllfllrvvllqgwyivaYalgiyllnlflafltPkfdpsleaeeedveegealpaakkedd..efrPfirrlpEfkfWlsatrailiallltlfsildipvfwPiLlvYfiilfvltmrrqikhmikykyvpfdlgkkkys 175
                  k q++ld +tp+++ RW+++a l++l+ lrv +++gwyi++Y lgiylln f+ fl+P +dp+++  +        +p++++e d    +Pf r+l EfkfW+++ ra++i++++t+f++++ipvfwPiLl+Yfi lfvltm+rqikhmik+kyvp++ gkk+y+
  MMETSP1325-20131115|11534_1   2 KIQQWLDWSTPHIAARWAVFAGLVFLYGLRVWYINGWYIITYGLGIYLLNNFIGFLSPLSDPETDGLD--------IPTTMSEADdlSGKPFGRKLSEFKFWCASARAVCISFFMTFFEMFNIPVFWPILLLYFIALFVLTMKRQIKHMIKHKYVPWTGGKKRYK 158
                  5799**********************************************************987766........4444444341267**************************************************************************97 PP

>> PF09973.4  Predicted membrane protein (DUF2208)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.9   3.1e-05      0.21      13      48 ..     103     142 ..      97     150 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 3.1e-05
    PF09973.4  13 lfslvlafypq....yylevfilYfiiflvisivmslrsn 48 
                   +s+ ++f+       ++++++lYfi+++v++++   +++
  MMETSP1325-20131115|11534_1 103 CISFFMTFFEMfnipVFWPILLLYFIALFVLTMKRQIKHM 142
                  56666666654111158999*************7766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       681  (0.0498098); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.34s 00:00:00.82 Elapsed: 00:00:00.57
# Mc/sec: 694.12
//
Query:       MMETSP1325-20131115|11539_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|11540_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       489  (0.0357665); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 318.06
//
Query:       MMETSP1325-20131115|11544_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-05   22.6   0.0    0.00011   21.6   0.0    1.5  1  PF11976.3 Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   8.1e-09   0.00011      10      61 ..      94     145 ..      81     147 .. 0.87

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 8.1e-09
                  S--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE-.---B--TTSBGGGSS CS
    PF11976.3  10 gkevkikVkpdttlskLieayrkkkgipeeeqvrLiF.DGerLdpndtvedld 61 
                  g+e ++++k++tt+ ++++ y+++kg++   ++ L F  Ge L+p++ ++d +
  MMETSP1325-20131115|11544_1  94 GDETFYNIKKSTTFFEVLSTYARRKGVAV-ASLMLRFiRGETLSPTQSPADFE 145
                  4599*************************.*******78**********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 858.69
//
Query:       MMETSP1325-20131115|11543_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 379.06
//
Query:       MMETSP1325-20131115|11546_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.61
# Mc/sec: 836.76
//
Query:       MMETSP1325-20131115|11555_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|11559_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       109  (0.0079725); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 258.07
//
Query:       MMETSP1325-20131115|11567_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 388.84
//
Query:       MMETSP1325-20131115|11569_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.42s 00:00:00.71 Elapsed: 00:00:00.62
# Mc/sec: 274.42
//
Query:       MMETSP1325-20131115|11568_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.62
# Mc/sec: 502.46
//
Query:       MMETSP1325-20131115|11573_1  [L=215]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-09   35.2   1.2    7.3e-05   22.7   0.1    2.4  2  PF13499.1  EF-hand domain pair
    2.6e-08   32.9   3.4      0.019   14.7   0.0    3.9  4  PF13405.1  EF-hand domain
    1.3e-06   27.1   9.8     0.0035   16.4   0.0    4.0  5  PF00036.27 EF hand
     0.0007   19.0   3.2       0.04   13.4   0.5    2.9  3  PF13833.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.082   12.1   0.0       0.38    9.9   0.0    2.1  2  PF01023.14 S-100/ICaBP type calcium binding domain
       0.14   11.4   3.0        1.4    8.2   0.0    3.2  3  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.1   3.2e-08   7.3e-05      15      63 ..      60     105 ..      56     108 .. 0.89
   2 !   11.1   0.1   0.00013       0.3       2      50 ..     120     176 ..     118     190 .. 0.79

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 3.2e-08
    PF13499.1  15 gyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63 
                  ++l+k+e+ ++l + g     e+  e+ld++f +lDk gd +++f Ef 
  MMETSP1325-20131115|11573_1  60 NTLTKDEFAEALEGVGI---VESDSEILDRLFIMLDKTGDQQINFREFI 105
                  68**************5...6777779999******************7 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00013
    PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgsels........deevrevldyifkelD 50 
                  l  aF+l+D dg+g + k+e+  +l+ +++  s        ++++  ++d+i +++D
  MMETSP1325-20131115|11573_1 120 LGFAFELYDMDGSGVVKKAEMNFILRSMNDTASyfgdpvmtQDQIAILVDEIYEKFD 176
                  6779****************9988888887766777777766666667777777776 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.044     1e+02      15      27 ..      60      72 ..      44      75 .. 0.80
   2 !   13.6   0.0   1.9e-05     0.043       2      24 ..      84     106 ..      83     111 .. 0.89
   3 !   14.7   0.0   8.2e-06     0.019       5      29 ..     123     146 ..     119     151 .. 0.90
   4 ?   -3.0   0.0       3.8   8.7e+03       4      11 ..     170     177 ..     168     180 .. 0.72

  Alignments for each domain:
  == domain 1    score: 3.1 bits;  conditional E-value: 0.044
                 --B---HHHHHHH CS
    PF13405.1 15 GkidaeELrdaLr 27
                 ++++++E+  aL 
  MMETSP1325-20131115|11573_1 60 NTLTKDEFAEALE 72
                 69********997 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 1.9e-05
                  HH---GCC-------B---HHHH CS
    PF13405.1   2 lreaFklfDkdgdGkidaeELrd 24 
                  l ++F ++Dk+gd +i++ E++ 
  MMETSP1325-20131115|11573_1  84 LDRLFIMLDKTGDQQINFREFIC 106
                  6789*****************86 PP

  == domain 3    score: 14.7 bits;  conditional E-value: 8.2e-06
                  --GCC-------B---HHHHHHH.H CS
    PF13405.1   5 aFklfDkdgdGkidaeELrdaLrks 29 
                  aF+l+D dg+G + ++E+  +Lr s
  MMETSP1325-20131115|11573_1 123 AFELYDMDGSGVVKKAEMNFILR-S 146
                  9*********************9.5 PP

  == domain 4    score: -3.0 bits;  conditional E-value: 3.8
                  ---GCC-- CS
    PF13405.1   4 eaFklfDk 11 
                  e++++fD+
  MMETSP1325-20131115|11573_1 170 EIYEKFDD 177
                  67788886 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.9   4.3e+03      17      27 ..      37      47 ..      36      49 .. 0.76
   2 ?    2.1   0.0     0.055   1.3e+02      16      27 ..      61      72 ..      60      74 .. 0.86
   3 !   16.4   0.0   1.5e-06    0.0035       2      26 ..      84     108 ..      83     111 .. 0.90
   4 !   13.3   0.1   1.5e-05     0.035       4      28 ..     122     146 ..     119     147 .. 0.87
   5 ?   -3.0   0.2       2.5   5.7e+03       2      10 ..     168     176 ..     168     177 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 1.9
                 BEHHHHHHHHH CS
   PF00036.27 17 IsfeEfkealk 27
                 I++ E++++ k
  MMETSP1325-20131115|11573_1 37 IEKRELLQMQK 47
                 78899999855 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.055
                 EBEHHHHHHHHH CS
   PF00036.27 16 kIsfeEfkealk 27
                 +++++Ef eal+
  MMETSP1325-20131115|11573_1 61 TLTKDEFAEALE 72
                 789******986 PP

  == domain 3    score: 16.4 bits;  conditional E-value: 1.5e-06
                  HHHHHHHHCTTTSSEBEHHHHHHHH CS
   PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                  l+++F ++Dk gd +I+f Ef+  +
  MMETSP1325-20131115|11573_1  84 LDRLFIMLDKTGDQQINFREFICGI 108
                  799******************9765 PP

  == domain 4    score: 13.3 bits;  conditional E-value: 1.5e-05
                  HHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27   4 eaFkefDkDgdGkIsfeEfkealkk 28 
                   aF+++D Dg+G + + E+  +l++
  MMETSP1325-20131115|11573_1 122 FAFELYDMDGSGVVKKAEMNFILRS 146
                  69***************99888876 PP

  == domain 5    score: -3.0 bits;  conditional E-value: 2.5
                  HHHHHHHHC CS
   PF00036.27   2 lkeaFkefD 10 
                  ++e+ ++fD
  MMETSP1325-20131115|11573_1 168 VDEIYEKFD 176
                  579999999 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.5   1.8e-05      0.04       5      48 ..      62     105 ..      60     106 .. 0.93
   2 !    4.7   0.0    0.0091        21      31      46 ..     124     139 ..     118     142 .. 0.89
   3 ?    2.1   0.0     0.058   1.3e+02       2      33 ..     132     170 ..     131     171 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.8e-05
    PF13833.1   5 ItreeLkralallglkglseee.vdilfrefDtdgdGkisfeEFc 48 
                  +t++e+ +al  +g+   s++e +d lf ++D  gd  i+f EF+
  MMETSP1325-20131115|11573_1  62 LTKDEFAEALEGVGIV-ESDSEiLDRLFIMLDKTGDQQINFREFI 105
                  79******99767888.9**************************6 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.0091
    PF13833.1  31 frefDtdgdGkisfeE 46 
                  f + D+dg+G ++++E
  MMETSP1325-20131115|11573_1 124 FELYDMDGSGVVKKAE 139
                  6677*********998 PP

  == domain 3    score: 2.1 bits;  conditional E-value: 0.058
    PF13833.1   2 kGlItreeLkral.allglkg......lseeevdilfre 33 
                  +G++ ++e+  +l ++  + +      ++ +++ il++e
  MMETSP1325-20131115|11573_1 132 SGVVKKAEMNFILrSMNDTASyfgdpvMTQDQIAILVDE 170
                  699999999999966666666999999999999999998 PP

>> PF01023.14  S-100/ICaBP type calcium binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.41   9.3e+02      24      33 ..      36      45 ..      32      51 .. 0.83
   2 ?    9.9   0.0   0.00017      0.38      16      31 ..      53      68 ..      40      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.41
                 CEEHHHHHHH CS
   PF01023.14 24 tLsKkELKeL 33
                 +++K EL ++
  MMETSP1325-20131115|11573_1 36 SIEKRELLQM 45
                 6789999997 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.00017
                 HTT---TTCEEHHHHH CS
   PF01023.14 16 SgkeGdkdtLsKkELK 31
                 ++++G+++tL+K+E+ 
  MMETSP1325-20131115|11573_1 53 AQRQGNPNTLTKDEFA 68
                 89************95 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.24   5.4e+02      15      23 ..      61      69 ..      60      71 .. 0.80
   2 ?    0.7   0.3      0.15   3.3e+02       2      21 ..      85     104 ..      84     105 .. 0.78
   3 ?    8.2   0.0   0.00062       1.4       4      16 ..     123     135 ..     122     142 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.24
                 -B-HHHHHH CS
    PF13202.1 15 kIsreELkr 23
                 +++++E+ +
  MMETSP1325-20131115|11573_1 61 TLTKDEFAE 69
                 799****76 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.15
                  HHHHHHH--S----B-HHHH CS
    PF13202.1   2 kdtFrafDlNgDGkIsreEL 21 
                  + +F  +D+ gD +I++ E+
  MMETSP1325-20131115|11573_1  85 DRLFIMLDKTGDQQINFREF 104
                  5589999*999977777777 PP

  == domain 3    score: 8.2 bits;  conditional E-value: 0.00062
                  HHHHH--S----B CS
    PF13202.1   4 tFrafDlNgDGkI 16 
                  +F+ +D++g+G +
  MMETSP1325-20131115|11573_1 123 AFELYDMDGSGVV 135
                  49*********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.44s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 1010.23
//
Query:       MMETSP1325-20131115|11575_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.03   13.9   0.7       0.03   13.9   0.5    1.9  2  PF11933.3 Domain of unknown function (DUF3451)


Domain annotation for each model (and alignments):
>> PF11933.3  Domain of unknown function (DUF3451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.5     0.024   3.3e+02     123     143 ..      10      31 ..       1      49 [. 0.65
   2 ?   13.9   0.5   2.2e-06      0.03      55      86 ..      54      85 ..      33      90 .] 0.65

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 0.024
    PF11933.3 123 rrsshssytShsSris.kltsn 143
                   +s     +S sSris  ++sn
  MMETSP1325-20131115|11575_1  10 SGSQITKSASASSRISpLMPSN 31 
                  4555666678888888655555 PP

  == domain 2    score: 13.9 bits;  conditional E-value: 2.2e-06
    PF11933.3 55 rktrkv..sqslLslpGspfntRRgSrg.siFsfR 86
                 r+   v    s+  ++G p++ RR Sr+ +iFs R
  MMETSP1325-20131115|11575_1 54 RAS--VhiVGSMVWMVGVPARARRKSRSaHIFS-R 85
                 333..33377888899****************9.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 385.13
//
Query:       MMETSP1325-20131115|11576_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.4   0.2      0.083   12.8   0.1    1.3  1  PF13551.1 Winged helix-turn helix
        0.1   12.1   0.1       0.14   11.7   0.0    1.2  1  PF09498.5 Protein of unknown function (DUF2388)


Domain annotation for each model (and alignments):
>> PF13551.1  Winged helix-turn helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   1.2e-05     0.083      40      88 ..       5      51 ..       2      63 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.2e-05
    PF13551.1 40 glaalldrkrrsgrprnlrlseeqeaalvalarekppegqarwtlrlla 88
                 +l+a+++ + r++ p+ ++ ++ +ea + al+r++ p++ +++ ++ ++
  MMETSP1325-20131115|11576_1  5 RLSAAVH-SARRRLPS-PKWTPSDEALAEALVRGRLPDQEVNLLRHIIR 51
                 6788898.77766666.58******************987655555554 PP

>> PF09498.5  Protein of unknown function (DUF2388)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     2e-05      0.14      43      70 ..       5      34 ..       2      36 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2e-05
    PF09498.5 43 rLeaaLqqlRsenpel..qasDleLAeAIL 70
                 rL aa+++ R++ p+     sD+ LAeA++
  MMETSP1325-20131115|11576_1  5 RLSAAVHSARRRLPSPkwTPSDEALAEALV 34
                 799********998875578********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:01.09
# Mc/sec: 193.47
//
Query:       MMETSP1325-20131115|11577_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.038   14.4   0.8       0.12   12.8   0.0    1.9  2  PF09538.5 Protein of unknown function (FYDLN_acid)


Domain annotation for each model (and alignments):
>> PF09538.5  Protein of unknown function (FYDLN_acid)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.2     0.081   1.1e+03      32      33 ..      42      43 ..       9      74 .. 0.47
   2 ?   12.8   0.0   8.6e-06      0.12      13      40 ..      76     108 ..      68     134 .. 0.68

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.081
    PF09538.5 32 cg 33
                 c+
  MMETSP1325-20131115|11577_1 42 CK 43
                 11 PP

  == domain 2    score: 12.8 bits;  conditional E-value: 8.6e-06
    PF09538.5  13 pecgkkFYDLnkdPivcpkcgeevepe.....k 40 
                   +++k FYDL k+ i    cg+ +        k
  MMETSP1325-20131115|11577_1  76 LSTKKTFYDLHKQEIWELGCGAIFVVLcyavyK 108
                  6899******************99877443331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       793  (0.0580018); expected 273.4 (0.02)
Passed bias filter:                      617  (0.0451287); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.56
# Mc/sec: 630.62
//
Query:       MMETSP1325-20131115|11583_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.4   0.0       0.15   12.1   0.0    1.2  1  PF13516.1 Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.1e-05      0.15       3      22 ..       3      23 ..       2      28 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.1e-05
    PF13516.1  3 nLtsLdLsnN.qigdeGlsaL 22
                 nLt++++  + +++d+ + aL
  MMETSP1325-20131115|11583_1  3 NLTTINITACtKLTDDAVVAL 23
                 9******87626******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.26u 0.39s 00:00:00.65 Elapsed: 00:00:00.54
# Mc/sec: 159.76
//
Query:       MMETSP1325-20131115|11589_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.40s 00:00:00.66 Elapsed: 00:00:00.51
# Mc/sec: 234.94
//
Query:       MMETSP1325-20131115|11590_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.8   1.2       0.19   11.6   0.8    1.0  1  PF06112.6 Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.8   1.4e-05      0.19      67     122 ..       7      61 ..       3      66 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.4e-05
    PF06112.6  67 GvrrkkhlqalrgakpetsssigsalsassssasgvpggaalSsssvsalsSgpss 122
                  Gvr  + +q+ r+   et  +++ + s++ +s+ g +g+ ++S+ssv  + S++s 
  MMETSP1325-20131115|11590_1   7 GVRGAEFMQTFRSVV-ETHGQRVAGRSNARNSTAGRAGTRSISASSVADILSRASV 61 
                  888888899999999.9999999999***9*******************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|11592_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.033   13.3   0.0      0.044   12.9   0.0    1.3  1  PF08412.5 Ion transport protein N-terminal


Domain annotation for each model (and alignments):
>> PF08412.5  Ion transport protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.3e-06     0.044      38      70 ..      12      44 ..       2      51 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.3e-06
    PF08412.5 38 iihPysdfrfYwdllmllllvgnliilPvgitF 70
                 i+ P+ d+++ wd ++ l +v+ ++++P++++F
  MMETSP1325-20131115|11592_1 12 ILDPTHDLKVAWDAYIGLWTVLSIFVIPLNLAF 44
                 889****************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 352.92
//
Query:       MMETSP1325-20131115|11594_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      174  (0.0127267); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 224.96
//
Query:       MMETSP1325-20131115|11601_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       108  (0.00789936); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 226.32
//
Query:       MMETSP1325-20131115|11609_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        93  (0.00680222); expected 273.4 (0.02)
Passed bias filter:                       84  (0.00614394); expected 273.4 (0.02)
Passed Vit filter:                         0  (0); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.60
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|11613_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       78  (0.00570509); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.66
# Mc/sec: 145.23
//
Query:       MMETSP1325-20131115|11607_1  [L=361]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-31  106.8  43.2    8.8e-30  103.4  30.0    1.9  1  PF05914.7 RIB43A
  ------ inclusion threshold ------
       0.72    9.4   3.4        0.5    9.9   0.1    2.3  2  PF09323.5 Domain of unknown function (DUF1980)


Domain annotation for each model (and alignments):
>> PF05914.7  RIB43A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4  30.0   1.3e-33   8.8e-30      10     379 .]      10     361 .]       4     361 .] 0.81

  Alignments for each domain:
  == domain 1    score: 103.4 bits;  conditional E-value: 1.3e-33
    PF05914.7  10 ekeaaaiekrrnaekerksRifnakvRviGvDleaLekQveekkereeaekerdeayaaqellndkvalllekeeeedrrelekelqeFReqkQkkeqrrefdlndpdalkkelParvgdddprlgpsslQkFeGEDLeekdrkkaQqeqqrewleqQveereqakeeekeadtlldelrveldkravelakleeecrraveqatadfNkalaeekrerekrekqeeqednlaEisnqvtsdlLtEnpdvaqsslgphrvladrykGMspeqleairktqeqQleekerrreeekerekewerqaielaraavllerqeerlrkelrkqlasanqqlakeqkaqrkylnkelYtNaptaqYfkqFntssR 379
                  e+e ++i++ r++++er+sR  n+++RviGvD+  L++Q++ekk+ ++ +k+ ++   + e+  ++++ + e+ee e +r+ + +l+e  +++  + + + + + d        P +      ++g+s+lQ+F+GED  + +r+++Q+eq ++w +qQ++er+++ +ee    + +++ +v    r ++l+++e    ++ +  +++ N alaee ++ + +e ++e+ +  aEi+  ++  +L E+ +va    +  r+  d++kG s++q  ++ ++ e+ +  k+    +  +++ ew+ ++ ++   +  ++ q + + ++ + + +++ +++ +  +a+++++ +e +  ++++ +++ F  s+R
  MMETSP1325-20131115|11607_1  10 EREEMRIAAIRKRMSERASRNQNPRMRVIGVDVAGLDAQIAEKKAMHHDNKADEKLQVQREQFINMMIEQREQEELETKRKEAAALKETWNEQLAAPKNQVAKMAD--------PVK----PEECGLSALQRFNGEDRSKYSRQRLQKEQVKSWTKQQMAERQAKANEEVDEMKRYAQYLVMIGDRRAQLEAEEGGDVKKRAMFLKEQNLALAEEVAAIKAAEVEAEKSARDAEIEFSMNDPFLCEDTSVA--LAADGRIRRDHFKGFSKDQTMTFYQENEKMIAAKAG---AGSQEDLEWSAHQQHVRNILDVEDAQLKAQARDINLAHRKMLEEQMQSERARKQEAAAERF-GKLDDSFYENFGCSHR 361
                  57999***************************************99887777766666666666777777777766666666666654333333332223333333........333....456*****************************************9999999999999999999999999999987777777889**********************************************..4555689****************9999988877765...5566788999999999999888888888887777777666655555555555555555553.799********99998 PP

>> PF09323.5  Domain of unknown function (DUF1980)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   7.3e-05       0.5      90     143 ..      40      92 ..      33     110 .. 0.77
   2 ?   -1.2   0.3      0.19   1.3e+03     132     144 ..     148     160 ..     125     180 .. 0.42

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 7.3e-05
    PF09323.5  90 vpaatLdssiaakkGisfllaqssksitsedeesseqklkpdtslyyaksayek 143
                  v  a Ld++ia+kk ++  + +++++++ + e+  + +++++++++++ +  e+
  MMETSP1325-20131115|11607_1  40 VDVAGLDAQIAEKKAMHHDN-KADEKLQVQREQFINMMIEQREQEELETKRKEA 92 
                  66789************888.788899999999999999999666555554443 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.19
    PF09323.5 132 tslyyaksayekq 144
                   ++  +++++e q
  MMETSP1325-20131115|11607_1 148 VKSWTKQQMAERQ 160
                  1111222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1528  (0.111761); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.80u 0.37s 00:00:01.17 Elapsed: 00:00:00.62
# Mc/sec: 1395.30
//
Query:       MMETSP1325-20131115|11614_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.9e-13   47.2   0.1    1.3e-12   46.8   0.0    1.2  1  PF02037.22 SAP domain
     0.0023   17.3   0.1      0.011   15.2   0.1    1.9  1  PF12949.2  HeH/LEM domain


Domain annotation for each model (and alignments):
>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   1.8e-16   1.3e-12       1      30 [.       3      32 ..       3      34 .. 0.98

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 1.8e-16
                 HTT--HHHHHHHHHHTT------HHHHHHH CS
   PF02037.22  1 lskltVaeLKaeLkkrGLptsGkKaeLieR 30
                 +s +tVaeLK+ L++ GLpt G+Ka+L++R
  MMETSP1325-20131115|11614_1  3 YSAMTVAELKKVLEEKGLPTDGLKADLVAR 32
                 89***************************9 PP

>> PF12949.2  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.6e-06     0.011       4      18 ..       6      20 ..       4      34 .. 0.83

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.6e-06
    PF12949.2  4 LtVaqLRriLvehgI 18
                 +tVa+L+++L e+g 
  MMETSP1325-20131115|11614_1  6 MTVAELKKVLEEKGL 20
                 8************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 261.82
//
Query:       MMETSP1325-20131115|11618_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        4.7    7.2  10.9        4.5    7.2   0.8    2.2  2  PF04569.9 Protein of unknown function


Domain annotation for each model (and alignments):
>> PF04569.9  Protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.2   0.00059         8      58      77 ..       4      23 ..       1      26 [. 0.86
   2 ?    7.2   0.8   0.00033       4.5      61      78 ..      27      44 ..      22      55 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.00059
    PF04569.9 58 gglRRRqpAarkgGngdgat 77
                  + RRR p  r  Gngd ++
  MMETSP1325-20131115|11618_1  4 TETRRRAPGQRGQGNGDTVS 23
                 589*************9875 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.00033
    PF04569.9 61 RRRqpAarkgGngdgatr 78
                 RRRq+Aa ++  g  a r
  MMETSP1325-20131115|11618_1 27 RRRQSAAEERADGFSAER 44
                 9*********98877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 390.00
//
Query:       MMETSP1325-20131115|11625_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.27   11.1   0.1       0.27   11.1   0.1    1.8  2  PF07621.6 Protein of unknown function (DUF1582)


Domain annotation for each model (and alignments):
>> PF07621.6  Protein of unknown function (DUF1582)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2       0.7   9.5e+03       1       6 [.      17      22 ..      17      24 .. 0.83
   2 ?   11.1   0.1   1.9e-05      0.27       4      24 ..      77      97 ..      76     100 .. 0.90

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 0.7
    PF07621.6  1 RaLpsP 6 
                 RaL sP
  MMETSP1325-20131115|11625_1 17 RALRSP 22
                 899888 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 1.9e-05
    PF07621.6  4 psPaflleaRlstlsnCaqeg 24
                 +sP ++++aR + +++ ++ +
  MMETSP1325-20131115|11625_1 77 LSPLPSATARVPMPPSIVVAS 97
                 69**************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 544.17
//
Query:       MMETSP1325-20131115|11627_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.7e-10   38.9   0.0    9.5e-10   38.8   0.0    1.1  1  PF10152.4 Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   6.9e-14   9.5e-10     106     139 ..      20      53 ..      13      64 .. 0.84

  Alignments for each domain:
  == domain 1    score: 38.8 bits;  conditional E-value: 6.9e-14
    PF10152.4 106 grltvrkdpryakYfkmlklgVpaeavknKmqae 139
                  g + v+++p y+kYfkm+k+gVp+  +++Km +e
  MMETSP1325-20131115|11627_1  20 GMVAVSEHPEYKKYFKMVKMGVPVGSIRQKMGLE 53 
                  568899*************************877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 361.90
//
Query:       MMETSP1325-20131115|11631_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 288.54
//
Query:       MMETSP1325-20131115|11638_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   13.7   0.0      0.034   13.6   0.0    1.1  1  PF12165.3 Domain of unknown function (DUF3594)


Domain annotation for each model (and alignments):
>> PF12165.3  Domain of unknown function (DUF3594)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.5e-06     0.034      70     121 ..      26      80 ..       6      88 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.5e-06
    PF12165.3  70 nfard..glqekdwlslvavhsdawlls.vafyfgarfgldkedrkrlfslindl 121
                    ard  g+++++ l  vav+   w +  +af    +++l++++ +r+ s +n++
  MMETSP1325-20131115|11638_1  26 SVARDagGVEQRELLLEVAVQLHVWDIGdMAFLGRGNYTLKRSELRRVASXLNEV 80 
                  567776689****************885388888899****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 394.96
//
Query:       MMETSP1325-20131115|11641_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-14   52.3   0.0    3.2e-14   52.1   0.0    1.0  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    1.3e-08   34.6   0.0    1.5e-08   34.4   0.0    1.1  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    0.00033   20.3   0.0    0.00043   19.9   0.0    1.1  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   0.0   7.1e-18   3.2e-14       1      52 [.      21      73 ..      21      74 .] 0.98

  Alignments for each domain:
  == domain 1    score: 52.1 bits;  conditional E-value: 7.1e-18
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESSHHHH CS
   PF00076.17  1 lfVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFeseeda 52
                 l+Vg+L p+v+e  L +lF+ +Gp+ si+++rd   +rs g+a+V+F++++da
  MMETSP1325-20131115|11641_1 21 LYVGDLAPEVSEGLLFDLFNTVGPVASIRVCRDaMLKRSLGYAYVNFHNQSDA 73
                 8***************************************************9 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   3.2e-12   1.5e-08       1      52 [.      21      73 ..      21      74 .] 0.97

  Alignments for each domain:
  == domain 1    score: 34.4 bits;  conditional E-value: 3.2e-12
    PF14259.1  1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefeseedA 52
                 lyv+ l p+v+e  l+++f+  g+v ++r++r+   +r+ g+A+v f ++ dA
  MMETSP1325-20131115|11641_1 21 LYVGDLAPEVSEGLLFDLFNTVGPVASIRVCRDAMlKRSLGYAYVNFHNQSDA 73
                 79***********************************************9998 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   9.4e-08   0.00043       1      34 [.      35      73 ..      35      74 .] 0.93

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 9.4e-08
    PF13893.1  1 LyklfskfGkverikifrkk....g.gqAfvefdtveaA 34
                 L++lf+ +G+v +i+++r+     + g+A+v f++ ++A
  MMETSP1325-20131115|11641_1 35 LFDLFNTVGPVASIRVCRDAmlkrSlGYAYVNFHNQSDA 73
                 899*******************9636**********999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 377.30
//
Query:       MMETSP1325-20131115|11619_1  [L=444]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.4e-156  520.8   0.0   1.6e-156  520.6   0.0    1.0  1  PF00162.14 Phosphoglycerate kinase


Domain annotation for each model (and alignments):
>> PF00162.14  Phosphoglycerate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  520.6   0.0  1.2e-160  1.6e-156       5     384 .]      53     433 ..      49     433 .. 0.98

  Alignments for each domain:
  == domain 1    score: 520.6 bits;  conditional E-value: 1.2e-160
                  S...--TT-EEEEEE-----BTT--BS--HHHHHHHHHHHHHHH---EEEEE------S..S--GGG-SHHHHHHHHHHHTS--EE-SS----HHHHHHHH-----EEE-S-GGG----T....T--HHHHHHHHHT-SEEEEE----TTS--TTTTGGGGGST------HHHHHHHHHHHHCT---SSEEEE---------HHHHHHHTTT-SEEE-----HHHHHHH-----------GGGHHHHHHHHH-------EEE--SEEEEESSSSTTS--EEEEGGG-----E-EE---HHHHHHHHHHTT-SEEEE------TTSGGG----HHHHHHHH--...--EEEE----HHHHHHH---CCCSSEE------HHHHH--- CS
   PF00162.14   5 l...dvkgkrvlvrvDlnvplkdgeitddtRiraalpTikellekgakvvllshlgrpkgkgkedklsLkpvakeLsellgkeVkfvddvvgeeaeaavkklkegevllLeNlRfykeeeskeekedeelakklasladvyVnDaFgtaHrahaStvgvakvlkpsaaGflmekElealekalenperpvvavlGGakvsdklkvienllkkvdklligGgmantFlkakglevgkslveeelvetakellekakekgvklvlPvDvvvakefkkdaeskvvesdeipedvmilDiGpktielfakvikeaktvvwnGplGvfefeaFakGTkavakalaes...galsivGGgdtaaaveklgladkfshiStGGgAsLelLegk 384
                  l   ++kgk+vlvr+Dlnvpl+ ++itddtRira++pT+k+ll++gakv  +shlgrpk+ g+e+k+sL+p+a+++se++g eVk+++d+vg+e++a+v+ +++g++++LeN+Rfykee+    k+++ +++kla+ +d++VnDaFgtaHrahaSt+gv+k+l+ps+ Gfl++kEle+l+ a+++ ++p++a++GG+kvs+k++v+e+l+kk+dk++igGgm++tFl+a+g+ +g+slvee+ +etak   + a+e++++l+lP D+vva++f++da+++vv++d+ip+++m+lD Gp+++e+++++++++ktvvwnGp+GvfefeaFa+GT++vak lae    ga++i+GGgd++aavek+glad++shiStGGgAsLelLegk
  MMETSP1325-20131115|11619_1  53 LspaELKGKKVLVRCDLNVPLDGKTITDDTRIRASVPTLKYLLDAGAKVAACSHLGRPKD-GPEEKFSLAPCAERMSEYIGSEVKLAPDCVGDETKAMVDGMDDGQLIILENTRFYKEET----KNEPGFVEKLADPFDLFVNDAFGTAHRAHASTEGVTKYLSPSVSGFLLAKELEFLDGAISDGDKPLAAIVGGSKVSSKITVLEALIKKCDKVIIGGGMVFTFLAARGIATGSSLVEEDFIETAKAAEKLAEENNCELILPKDIVVADKFAADANTQVVDQDKIPDGWMGLDNGPAATEEIKAALADCKTVVWNGPMGVFEFEAFAAGTFDVAKCLAEItktGACTIIGGGDSVAAVEKAGLADQMSHISTGGGASLELLEGK 433
                  555599***************999**********************************96.9**********************************************************....***********************************************************************************************************************************************************************************************************************999889****************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 2046.12
//
Query:       MMETSP1325-20131115|11637_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-05   23.4   0.7    5.6e-05   23.1   0.5    1.0  1  PF10249.4 NADH-ubiquinone oxidoreductase subunit 10


Domain annotation for each model (and alignments):
>> PF10249.4  NADH-ubiquinone oxidoreductase subunit 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.5   4.1e-09   5.6e-05      36      94 ..      25      83 ..      23      93 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 4.1e-09
    PF10249.4 36 eCqeddvvClyeaeeqyrrdrkvdqeivkilrerleaCqqyekedhvqkCaklleqfee 94
                 + +++d v + +++eq  r+  +  + vk+++e +++C  +++ +h q C+++ +++  
  MMETSP1325-20131115|11637_1 25 QATKEDPVKFLQSQEQMARELEIKVQTVKLMQEEIKHCYRKNGVNHYQACKEVTSKYMA 83
                 56789999999******************************************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       972  (0.0710942); expected 273.4 (0.02)
Passed bias filter:                      771  (0.0563926); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.44s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 460.84
//
Query:       MMETSP1325-20131115|11636_1  [L=413]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-53  181.7   9.6    2.1e-53  181.3   6.7    1.1  1  PF00112.18 Papain family cysteine protease
    1.9e-08   33.1   0.9    2.2e-05   23.0   0.2    2.2  2  PF03051.10 Peptidase C1-like family
    4.9e-05   23.4   0.1    0.00011   22.2   0.0    1.6  1  PF13908.1  Wnt and FGF inhibitory regulator
    0.00013   22.0   0.0    0.00021   21.3   0.0    1.4  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)
  ------ inclusion threshold ------
      0.074   12.4   0.0       0.12   11.7   0.0    1.3  1  PF00517.12 Retroviral envelope protein


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.3   6.7   7.6e-57   2.1e-53       5     218 ..      91     298 ..      87     300 .. 0.91

  Alignments for each domain:
  == domain 1    score: 181.3 bits;  conditional E-value: 7.6e-57
                  --CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-TTTS-TT----HHHHHHHHHHC---BBTTTS---SSC-....S--CCCC--C.CCCECEEEEEESS-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCT....TC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
   PF00112.18   5 vDwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCskeenegCnGGlmenafeyikknggivtekdypYkakeg...gkCkkkkkkekevakikgygkvkenseealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygven....gkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                   Dw +  ++ t+vk+qg CGsCWafs v+++e+ ++    ++ ++lS qelv+C++ +n+gCnGG+ ++a++yi + gg+v+e+ ypY +  +    +C+++k+++  ++ +++y +    se+a+++++ ++gP+s+aidas++  q+Y++G++++  c + +++hav++ G ++++    g  yW v+NSWgtdwG +GYi+++ g + +cgi++ ++y
  MMETSP1325-20131115|11636_1  91 ADWTD--TYTTAVKNQGYCGSCWAFSVVEQVESDTMRLL-GEDFTLSPQELVSCDS-TNSGCNGGWTTTAYDYIESVGGLVQESAYPYISGATglsYTCDTDKTDNP-LVVVTDYYQYY--SEQAMAQHVGTVGPLSIAIDASQW--QSYTGGILSS--CGT-TIDHAVQVTGVNTDSsnsmGGAYWKVRNSWGTDWGYSGYIYLSYGDD-TCGITTIPTY 298
                  68988..479****************************9.7**************8.9******************************9666557789***998866.67777777654..479********************5..*********8..995.9************99999999************************88.****987766 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00024      0.65      53      92 ..      96     134 ..      80     142 .. 0.84
   2 !   23.0   0.2   8.1e-09   2.2e-05     355     398 ..     239     284 ..     221     286 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00024
   PF03051.10  53 vetdevtnqkqsGRCWlFaalnvlRlkllkklklkefels 92 
                  + t  v nq   G CW F+ + ++  ++++ l  ++f+ls
  MMETSP1325-20131115|11636_1  96 TYTTAVKNQGYCGSCWAFSVVEQVESDTMRLL-GEDFTLS 134
                  5567899*****************99999765.4788887 PP

  == domain 2    score: 23.0 bits;  conditional E-value: 8.1e-09
   PF03051.10 355 geslmtHamvltgvdvdddgkv..tkwkvEnsWGedsGekGyfvms 398
                    + ++Ha+ +tgv+ d+++++    wkv nsWG d G  Gy  +s
  MMETSP1325-20131115|11636_1 239 CGTTIDHAVQVTGVNTDSSNSMggAYWKVRNSWGTDWGYSGYIYLS 284
                  556899**********9987653378****************8765 PP

>> PF13908.1  Wnt and FGF inhibitory regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   4.2e-08   0.00011      64     120 ..     326     378 ..     307     411 .. 0.69

  Alignments for each domain:
  == domain 1    score: 22.2 bits;  conditional E-value: 4.2e-08
    PF13908.1  64 kfrkpvedptkdlkvvlivsiilivvfivvliviftcskcvlekavrrqrpvvtsas 120
                  ++ ++ ed+t +l  +   +++ i vfi+v++v+++ s+c+++   rrq+p +    
  MMETSP1325-20131115|11636_1 326 DWLQDIEDAT-GLDEQ---YVVAILVFIIVFVVCLCISCCCRQTRPRRQPPIRHVQN 378
                  5666666666.43333...44455689*********9****9999999999876554 PP

>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   7.6e-08   0.00021      23      58 .]       1      39 [.       1      39 [. 0.91

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 7.6e-08
    PF08246.7 23 enFkeNlrqiqehN...anknvtftlglNkfsDlsheEf 58
                 e+Fk N   i+  N   a    + t g++kfsDl++eEf
  MMETSP1325-20131115|11636_1  1 EIFKANIDLIAARNaaeALAGGSATHGITKFSDLTQEEF 39
                 79************8866777788**************9 PP

>> PF00517.12  Retroviral envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.4e-05      0.12     151     188 ..     325     370 ..     311     390 .. 0.59

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.4e-05
   PF00517.12 151 tsWi............kiikigililliiivlrilvkvlrnckrvrqgys 188
                   +W+            +++ i++ i++++++l+i +++ +     r +++
  MMETSP1325-20131115|11636_1 325 KDWLqdiedatgldeqYVVAILVFIIVFVVCLCISCCCRQT----RPRRQ 370
                  45666666666655555666666666666666666666555....33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       746  (0.0545641); expected 273.4 (0.02)
Passed bias filter:                      524  (0.0383265); expected 273.4 (0.02)
Passed Vit filter:                        73  (0.00533938); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.80u 0.35s 00:00:01.14 Elapsed: 00:00:00.47
# Mc/sec: 2105.73
//
Query:       MMETSP1325-20131115|11644_1  [L=245]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-06   26.1   2.7    1.1e-05   25.2   1.9    1.4  1  PF00684.14 DnaJ central domain
  ------ inclusion threshold ------
       0.87    9.0   3.4         15    5.0   0.1    2.2  2  PF08792.5  A2L zinc ribbon domain
        2.2    8.1  12.3       0.82    9.5   1.4    2.2  2  PF06112.6  Gammaherpesvirus capsid protein


Domain annotation for each model (and alignments):
>> PF00684.14  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   1.9   2.5e-09   1.1e-05      12      55 ..      95     134 ..      88     138 .. 0.84

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 2.5e-09
   PF00684.14  12 gkkvktCkkCnGsGvvvkeqrapggvvqsqqtCekCkGkGkiie 55 
                   + +++C+ C+G+G+++ e     + ++ q++Ce+C+G+G+i++
  MMETSP1325-20131115|11644_1  95 LDMIHVCHICHGTGIETYEY----MHMSRQRNCETCDGEGTITR 134
                  566789********998877....899**************973 PP

>> PF08792.5  A2L zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.2    0.0042        19       4      15 ..      99     110 ..      96     116 .. 0.83
   2 ?    5.0   0.1    0.0033        15       3      15 ..     120     132 ..     118     136 .. 0.81

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0042
    PF08792.5   4 kvCsyCggngil 15 
                   vC+ C+g+gi 
  MMETSP1325-20131115|11644_1  99 HVCHICHGTGIE 110
                  69********97 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.0033
    PF08792.5   3 lkvCsyCggngil 15 
                  +++C+ C+g+g +
  MMETSP1325-20131115|11644_1 120 QRNCETCDGEGTI 132
                  89*******9966 PP

>> PF06112.6  Gammaherpesvirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   2.0    0.0088        40      96     129 ..      38      78 ..      15      94 .. 0.61
   2 ?    9.5   1.4   0.00018      0.82      76     121 ..     146     191 ..     128     221 .. 0.66

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.0088
    PF06112.6  96 sssasgvpggaa.......lSsssvsalsSgpsslssssse 129
                  ++++sg++++++       +  + v+ l+S++ss sss  e
  MMETSP1325-20131115|11644_1  38 TQGGSGLSSVPSeyggtkpVDYGAVTPLTSSSSSSSSSADE 78 
                  33344444444444477788888888888888888777544 PP

  == domain 2    score: 9.5 bits;  conditional E-value: 0.00018
    PF06112.6  76 alrgakpetsssigsalsassssasgvpggaalSsssvsalsSgps 121
                   lrg +pe+++     + a++  +   +g aa+ s+s+ +++S  +
  MMETSP1325-20131115|11644_1 146 PLRGGTPEARAAEAATAAAATDESAHTSGAAAVASNSTATAASATT 191
                  4677777777666555555544444444677777777777777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       804  (0.0588063); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1048.41
//
Query:       MMETSP1325-20131115|11649_1  [L=386]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.6e-103  346.8   0.1   1.8e-103  346.6   0.1    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  346.6   0.1  1.3e-107  1.8e-103     127     487 ..       2     371 ..       1     372 [. 0.97

  Alignments for each domain:
  == domain 1    score: 346.6 bits;  conditional E-value: 1.3e-107
   PF00118.19 127 slnsklssresellsklvvdAvkiieeea.eldvgnigvikieggsledselieGvvldkgylspdmpkrlenpkillldcsleteke.tktkvvlkdaeelekleeaeekqllpllekivesgvnl........viiakgiddealhfLakngilalrrvkkedlerlakltgatavsrlesleeedlGkakkveeeeigedkttliegestlsgkvatillrgateveldeleraiedalravkaalkdegvvpGGGaaelelskkLreeakslsgkeqlgieifakAleaipktLaeNagldpkevlaklkaah.kkgenlgidaetgeiidlveagilDplkvkrsalksavevasliLtidqiikak 487
                  sl++kl  + ++l+ + +vdAv+++ e + ++d++++++++++++   ds++++G+vld+g ++pdmp+ len++++++++s+e+ek+ + t++ +++aee++kl+e+e+k+ ++++ + +e ++++        +i++kgid+++l++Lak+gi+a+rr+k++++er+++++g+t+v+++ +l+++ lG+a+kv+ee++g+dk+t+ie  +++ +k++til++g++ +++d++++a++d+lra+k+a++d+ vv+G+Ga+e+++++ L  ++ +++gk +lg++++a+A++ ipk+LaeN+g+d ++ +  l+++h k+g  +g+d+ tge+i ++++gi+D+++vkr+ +  ++  a+++L++d++++a 
  MMETSP1325-20131115|11649_1   2 SLRTKLQAEVADLMVDACVDAVQAVAEPDmPIDLHMVEIMTMKHKLGGDSRFVRGLVLDHGTRHPDMPTYLENCFVCTCNVSFEYEKSeVATGFLYSNAEERQKLVESERKFTDEKVGAFIELKRQVctegqsfvIINQKGIDPMSLDMLAKEGIFAVRRAKRRNMERVTLACGGTPVNSEIDLDPSVLGWAGKVYEEQLGDDKFTFIE--DVKAAKSCTILIKGPNTHTIDQIKDAVRDGLRAAKNAIEDKAVVAGAGAFETAAYTSLMGFKGTVTGKAKLGVQAYADAMLIIPKVLAENSGFDVQDSIISLQEEHeKEGAAIGLDLVTGECILPAAEGIWDNYRVKRQYIHLSTALATQLLLVDEVMRAG 371
                  789999999999999999999988877779**************999*****************************************9************************************************************************************************************************..99******************************************************************************************************9945555**********************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.50
# Mc/sec: 1849.99
//
Query:       MMETSP1325-20131115|11652_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0086   14.0   0.0      0.011   13.7   0.0    1.0  1  PF01175.13 Urocanase


Domain annotation for each model (and alignments):
>> PF01175.13  Urocanase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   7.8e-07     0.011     262     312 ..      39      90 ..      22      97 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 7.8e-07
   PF01175.13 262 e.gYlPagltleeakelrekdpeelvkaakeslarhveailelqekgaevfd 312
                  + gY+P gl+ +++++l++++ ++  ++ k++++  ve++++ q++ ae f 
  MMETSP1325-20131115|11652_1  39 SmGYVPDGLSPAQYAKLKKDEAKAKADNKKKAMKGSVETLTQWQARNAEKFK 90 
                  24*******************************************9998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       707  (0.0517115); expected 273.4 (0.02)
Passed bias filter:                      513  (0.0375219); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 743.36
//
Query:       MMETSP1325-20131115|11650_1  [L=332]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       457  (0.033426); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.39s 00:00:01.03 Elapsed: 00:00:00.53
# Mc/sec: 1501.11
//
Query:       MMETSP1325-20131115|11656_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-20   71.3   0.0    6.4e-20   71.0   0.0    1.1  1  PF06212.7 GRIM-19 protein
  ------ inclusion threshold ------
       0.13   11.7   0.0       0.16   11.3   0.0    1.2  1  PF07685.9 CobB/CobQ-like glutamine amidotransferase domain


Domain annotation for each model (and alignments):
>> PF06212.7  GRIM-19 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   0.0   9.3e-24   6.4e-20       4      98 ..      10     103 ..       7     109 .. 0.92

  Alignments for each domain:
  == domain 1    score: 71.0 bits;  conditional E-value: 9.3e-24
    PF06212.7   4 kvkqDlpPpGGykpidfkRvlpkrglsgvamfatligvtavglyklletnkerrreeiEklearnailpllqAErDrrylkqlrrnreeEaelmk 98 
                  +  qDlpP+GGy +++++ +++ rg+sg  + +  + ++  g+y++ +tn +rr+e++Ek+ear ai pllqAE+D ry++  rrn e   ++ k
  MMETSP1325-20131115|11656_1  10 QYLQDLPPEGGYPEVRYRPKPTVRGPSGAMIWGLSVLAVCGGFYRVGQTNIARRAEKEEKREARFAIAPLLQAEEDLRYVQA-RRNGEVSSNVYK 103
                  567****************************************************************************975.778777777766 PP

>> PF07685.9  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.4e-05      0.16      42      94 ..      42      96 ..      38     107 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.4e-05
    PF07685.9 42 ggpvlgiCGGyqmLgekied.gieseag.gekveglglLdietefekektlgqve 94
                 g  vl++CGG+   g++ +  + e+e++ + + + + lL++e  ++  ++ ++ e
  MMETSP1325-20131115|11656_1 42 GLSVLAVCGGFYRVGQTNIArRAEKEEKrEARFAIAPLLQAEEDLRYVQARRNGE 96
                 6789************998886666444044588888888776666655555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 501.46
//
Query:       MMETSP1325-20131115|11661_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|11662_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-17   62.6   0.0    2.6e-17   62.6   0.0    1.0  1  PF01894.12 Uncharacterised protein family UPF0047


Domain annotation for each model (and alignments):
>> PF01894.12  Uncharacterised protein family UPF0047
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.0   1.9e-21   2.6e-17      63     117 ..      21      75 .]       4      75 .] 0.90

  Alignments for each domain:
  == domain 1    score: 62.6 bits;  conditional E-value: 1.9e-21
                  GGT..STHHHH--------EEEE-B----B------EEEEEE----EEEEEEEEE CS
   PF01894.12  63 neegednadaHlkssllgnsltvpvsngklalGtwqgiylvEldgpreRkvvvtv 117
                  +++++ na++Hl ++llg+s+tvpv +gk++lG+wq+++lv++dgpreR+v ++v
  MMETSP1325-20131115|11662_1  21 RDQEPINAHSHLLAMLLGSSETVPVVDGKMVLGQWQSVMLVDIDGPRERNVGMQV 75 
                  456689*********************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 320.94
//
Query:       MMETSP1325-20131115|11665_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 1148.44
//
Query:       MMETSP1325-20131115|11668_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 222.52
//
Query:       MMETSP1325-20131115|11669_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-05   22.3   0.1      0.084   12.6   0.0    2.9  3  PF13405.1  EF-hand domain
     0.0022   18.0   1.0        1.5    8.8   0.2    2.4  2  PF13499.1  EF-hand domain pair
  ------ inclusion threshold ------
      0.014   14.5   0.0       0.88    8.9   0.0    2.8  2  PF00036.27 EF hand


Domain annotation for each model (and alignments):
>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.8   8.2e+03      13      23 ..      18      29 ..      17      31 .. 0.67
   2 !   12.6   0.0   1.9e-05     0.084       3      27 ..      46      70 ..      44      76 .. 0.88
   3 !    6.5   0.0    0.0018       8.2       5      29 ..      84     107 ..      80     113 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 1.8
                 ---.-B---HHH CS
    PF13405.1 13 gdG.kidaeELr 23
                 +dG +i+++ + 
  MMETSP1325-20131115|11669_1 18 NDGtFISRKHFH 29
                 577688887765 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 1.9e-05
                 H---GCC-------B---HHHHHHH CS
    PF13405.1  3 reaFklfDkdgdGkidaeELrdaLr 27
                  ++F+lfDk+g G++ + +++  L+
  MMETSP1325-20131115|11669_1 46 DRLFTLFDKTGGGTVAFRDFIVGLT 70
                 589*****************98776 PP

  == domain 3    score: 6.5 bits;  conditional E-value: 0.0018
                  --GCC-------B---HHHHHHH.H CS
    PF13405.1   5 aFklfDkdgdGkidaeELrdaLrks 29 
                  a +l+D   +G +++ +++ ++r s
  MMETSP1325-20131115|11669_1  84 ALELYDLEATGLLNQTDIKMVFR-S 107
                  6689****************999.5 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.2   0.00034       1.5      34      63 ..      27      66 ..       5      69 .. 0.79
   2 !    7.6   0.0   0.00082       3.7       5      50 ..      84     137 ..      79     149 .. 0.77

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00034
    PF13499.1 34 s..........deevrevldyifkelDkngdGvlsfeEfl 63
                 +          de+ r++ d++f  +Dk g G++ f +f 
  MMETSP1325-20131115|11669_1 27 HfhqaeaavtvDESDRDIYDRLFTLFDKTGGGTVAFRDFI 66
                 14455566667889999********************996 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.00082
    PF13499.1   5 aFkllDkdgdgyldkeeLlrllkhlgsels............deevrevldyifkelD 50 
                  a +l+D   +g l++++++ +++ +++  s            d    e+++ +f  +D
  MMETSP1325-20131115|11669_1  84 ALELYDLEATGLLNQTDIKMVFRSMNHTAScmgdptlvldqlD----ELVETVFVSVD 137
                  6789********************9988889888777744443....44444465555 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   0.00019      0.88       3      26 ..      46      69 ..      44      72 .. 0.89
   2 ?    2.7   0.0     0.019        86       5      29 .]      84     108 ..      80     108 .. 0.87

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00019
                 HHHHHHHCTTTSSEBEHHHHHHHH CS
   PF00036.27  3 keaFkefDkDgdGkIsfeEfkeal 26
                 +++F +fDk g G++ f +f+  l
  MMETSP1325-20131115|11669_1 46 DRLFTLFDKTGGGTVAFRDFIVGL 69
                 789****************98776 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.019
                  HHHHHCTTTSSEBEHHHHHHHHHHH CS
   PF00036.27   5 aFkefDkDgdGkIsfeEfkealkkl 29 
                  a +++D   +G ++  + k +++++
  MMETSP1325-20131115|11669_1  84 ALELYDLEATGLLNQTDIKMVFRSM 108
                  6789************999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 821.61
//
Query:       MMETSP1325-20131115|11673_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-28   98.9   0.0    2.4e-28   98.9   0.0    1.0  1  PF07289.6 Protein of unknown function (DUF1448)


Domain annotation for each model (and alignments):
>> PF07289.6  Protein of unknown function (DUF1448)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.9   0.0   1.7e-32   2.4e-28     174     244 ..       2      73 ..       1      76 [] 0.92

  Alignments for each domain:
  == domain 1    score: 98.9 bits;  conditional E-value: 1.7e-32
    PF07289.6 174 lGtfivtniRlvWfaeanesfNvSiPylqieslrvreskfgkalvietsseaggyvlGfrvdPee.kldell 244
                  lG+f +tniRlvW a+ +++fNvSiPy+q++ +++r skfg alv+ ts +aggyvlGfrvdP    ld+++
  MMETSP1325-20131115|11673_1   2 LGSFTITNIRLVWAANLAQNFNVSIPYMQMKDIKTRPSKFGDALVVSTSPKAGGYVLGFRVDPDRaALDRAF 73 
                  8**************************************************************741566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|11675_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 474.48
//
Query:       MMETSP1325-20131115|11680_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|11681_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 498.07
//
Query:       MMETSP1325-20131115|11683_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.45s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 503.23
//
Query:       MMETSP1325-20131115|11676_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-25   88.5  16.8    2.7e-25   88.5  11.6    1.4  2  PF13879.1  KIAA1430 homologue
  ------ inclusion threshold ------
      0.035   14.1   3.2      0.035   14.1   2.2    2.3  3  PF11333.3  Protein of unknown function (DUF3135)
      0.056   13.5   0.1       0.11   12.6   0.1    1.5  1  PF11243.3  Protein of unknown function (DUF3045)


Domain annotation for each model (and alignments):
>> PF13879.1  KIAA1430 homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.5  11.6   5.9e-29   2.7e-25       1      97 [.      26     123 ..      26     124 .. 0.96
   2 ?   -3.7   0.0         3   1.4e+04      44      53 ..     140     149 ..     136     157 .. 0.52

  Alignments for each domain:
  == domain 1    score: 88.5 bits;  conditional E-value: 5.9e-29
    PF13879.1   1 khlkklkeikssidnkepkrhkhlkkklkklqqeeerlkeIereNqiLlskiieiqerkgsqslskv.sqkkslnlskRkkeqqkIdeENqkllkRle 97 
                  kh++kl+e+k sidn +pkrh+hl+k+lkk q +eer++eIer+N++Ll+k++ i+++++  + +++ +  +sln+++Rk+e+q+I+++Nq++l+R++
  MMETSP1325-20131115|11676_1  26 KHKQKLREMKCSIDNAPPKRHSHLHKNLKKEQLMEERFAEIERDNRLLLEKMSYIMRHNSLDNVNTStQYGHSLNKEQRKRELQRITKDNQAILRRIQ 123
                  6***********************************************************99888774667**************************9 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 3
    PF13879.1  44 eNqiLlskii 53 
                  +N++ +++i+
  MMETSP1325-20131115|11676_1 140 RNEQYMKNIC 149
                  4444444444 PP

>> PF11333.3  Protein of unknown function (DUF3135)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.2   7.8e-06     0.035      26      79 ..      14      67 ..      11      71 .. 0.93
   2 ?   -1.2   0.2      0.47   2.1e+03      24      48 ..     100     124 ..      97     126 .. 0.73
   3 ?   -1.3   0.0      0.48   2.2e+03       4      14 ..     127     137 ..     124     142 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 7.8e-06
    PF11333.3 26 elieeaIesaseeqqrrLrglqfhidmqlsraknPvhrcvlisklmqekleklr 79
                 +  ++ ++ ++++++++Lr+++  id    +  + +h + + ++lm+e++ + +
  MMETSP1325-20131115|11676_1 14 QCYQRHVQMCQDKHKQKLREMKCSIDNAPPKRHSHLHKNLKKEQLMEERFAEIE 67
                 667889999*****************************************9876 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.47
    PF11333.3  24 rqelieeaIesaseeqqrrLrglqf 48 
                   +e+ ++  ++ ++++q+ Lr +q+
  MMETSP1325-20131115|11676_1 100 NKEQRKRELQRITKDNQAILRRIQH 124
                  5666777777788888888888886 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 0.48
    PF11333.3   4 pdfdeLvaLak 14 
                  p++d+L +L +
  MMETSP1325-20131115|11676_1 127 PTYDHLSWLEE 137
                  899*****976 PP

>> PF11243.3  Protein of unknown function (DUF3045)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   2.4e-05      0.11       4      71 ..      82     150 ..      79     155 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.4e-05
    PF11243.3   4 vhditenknttrdyGh.vnqffrdrpefravkdee.ifkkcveqGfiyvskyyveGlkkrittyqkslke 71 
                   h+  +n nt+ +yGh +n+  r r + r  kd++ i+++       y    ++e  ++    y k + e
  MMETSP1325-20131115|11676_1  82 RHNSLDNVNTSTQYGHsLNKEQRKRELQRITKDNQaILRRIQHSEPTYDHLSWLEEARRN-EQYMKNICE 150
                  58899***********669**************863666655555566655666655444.666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       976  (0.0713868); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.45s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 812.88
//
Query:       MMETSP1325-20131115|11688_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 498.83
//
Query:       MMETSP1325-20131115|11694_1  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-17   62.2  37.5    2.8e-13   49.3   4.0    4.2  4  PF01485.16 IBR domain
  ------ inclusion threshold ------
        2.7    7.6   4.4        4.4    6.9   3.0    1.3  1  PF13190.1  PDGLE domain
        5.5    6.7  39.5        1.2    8.9   2.0    4.6  4  PF13923.1  Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.3     0.044     2e+02      48      58 ..      71      81 ..      54      85 .. 0.72
   2 ?    3.2   0.1     0.015        70      15      34 ..      87     108 ..      78     111 .. 0.66
   3 !   49.3   4.0   6.2e-17   2.8e-13       8      60 ..     128     179 ..     122     185 .. 0.86
   4 !   20.7   8.9   5.6e-08   0.00026      19      56 ..     211     244 ..     199     260 .. 0.86

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.044
   PF01485.16 48 fefCflCkkew 58
                 +++C+ C ++w
  MMETSP1325-20131115|11694_1 71 HATCSTCTRAW 81
                 45566666555 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.015
   PF01485.16  15 ekelk..wCprpdCeaiiekek 34 
                  + ++   +Cp+ +C ++i +++
  MMETSP1325-20131115|11694_1  87 DHKILefKCPNWECARAIPHSE 108
                  33332479********998765 PP

  == domain 3    score: 49.3 bits;  conditional E-value: 6.2e-17
   PF01485.16   8 lkkylesekelkwCprpdCeaiiekekgakkssvtCskCgfefCflCkkewHe 60 
                  + + ++++++++wCp+p+C++++  +++a+++ ++C++C+++fC++C+++w +
  MMETSP1325-20131115|11694_1 128 YIRSIDTNPNARWCPSPECGEPVYRTNKAERR-MQCTSCNTAFCYNCGAPWTS 179
                  4567889***********************97.******************54 PP

  == domain 4    score: 20.7 bits;  conditional E-value: 5.6e-08
   PF01485.16  19 kwCprpdCeaiiekekgakkssvtCskCgfefCflCkk 56 
                  ++Cp   C + i+ke+g+++  v C +C+ efC+lC +
  MMETSP1325-20131115|11694_1 211 RKCPC--CMSRIVKEGGCNH--VVCGNCRAEFCWLCVE 244
                  69977..*************..**************76 PP

>> PF13190.1  PDGLE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   3.0   0.00096       4.4      68      87 ..     292     311 ..     273     312 .. 0.91

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00096
    PF13190.1  68 svsgivGvlltlalagligf 87 
                  +vsg+vG++l+l++a+l+ f
  MMETSP1325-20131115|11694_1 292 IVSGVVGGVLLLVVAVLVLF 311
                  89**************9987 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   1.0       0.2   9.3e+02       4      12 ..       2      10 ..       1      27 [. 0.70
   2 ?    7.4   1.2   0.00075       3.4      22      43 ..      70      97 ..      65     102 .. 0.84
   3 ?    8.9   2.0   0.00026       1.2      12      37 ..     156     181 ..     144     207 .. 0.85
   4 ?    7.4   7.6   0.00074       3.4       3      31 ..     211     244 ..     209     261 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.4 bits;  conditional E-value: 0.2
    PF13923.1  4 sCpiCleel 12
                 +C +C++  
  MMETSP1325-20131115|11694_1  2 ECIVCFDLI 10
                 7****9976 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.00075
    PF13923.1 22 gHlyCkkCieqwleks......kkkCPi 43
                  H +C++C   w++++      + kCP 
  MMETSP1325-20131115|11694_1 70 AHATCSTCTRAWIKSQldhkilEFKCPN 97
                 599************9997666669996 PP

  == domain 3    score: 8.9 bits;  conditional E-value: 0.00026
    PF13923.1  12 lenpviltpCgHlyCkkCieqwleks 37 
                  +e  + +t C+  +C++C   w + +
  MMETSP1325-20131115|11694_1 156 AERRMQCTSCNTAFCYNCGAPWTSAH 181
                  4557789************9998875 PP

  == domain 4    score: 7.4 bits;  conditional E-value: 0.00074
    PF13923.1   3 fsCpiCleelen.....pviltpCgHlyCkkCie 31 
                  ++Cp C+++  +      v++ +C+  +C+ C+e
  MMETSP1325-20131115|11694_1 211 RKCPCCMSRIVKeggcnHVVCGNCRAEFCWLCVE 244
                  79********887888888899999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       876  (0.0640726); expected 273.4 (0.02)
Passed bias filter:                      403  (0.0294763); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.38s 00:00:01.14 Elapsed: 00:00:00.63
# Mc/sec: 1453.03
//
Query:       MMETSP1325-20131115|11695_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.086   12.2   0.2      0.092   12.1   0.1    1.1  1  PF05808.6  Podoplanin
      0.098   12.2   0.3       0.21   11.1   0.2    1.6  1  PF01424.17 R3H domain


Domain annotation for each model (and alignments):
>> PF05808.6  Podoplanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.3e-05     0.092      59     117 ..      25      83 ..       3      89 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.3e-05
    PF05808.6  59 lnesglaplvptetesvtklhledlptaestdhdkeeakstttvkvvtshsadktddet 117
                  +  +g  pl +  + ++   ++  l+t+  +  +  ++ st t + v + s++ t de 
  MMETSP1325-20131115|11695_1  25 PGLAGVGPLASHARANAPSVQFPALSTHRRSLMHAIKHASTQTFTTVRTRSQGTTMDEG 83 
                  344578899999999999***********************************999986 PP

>> PF01424.17  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2     3e-05      0.21       8      31 ..      37      60 ..      33      82 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3e-05
                 HHTSSEEEE-TT--CHHHHHHHHH CS
   PF01424.17  8 vkstsksvflppmtseeRkliHel 31
                 +  +  sv++p ++ + R+l+H +
  MMETSP1325-20131115|11695_1 37 ARANAPSVQFPALSTHRRSLMHAI 60
                 566789****************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 449.93
//
Query:       MMETSP1325-20131115|11698_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-17   60.8   0.0      1e-16   60.6   0.0    1.0  1  PF00650.15 CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> PF00650.15  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.0   7.7e-21     1e-16      57     134 ..      10      87 ..       2      88 .] 0.90

  Alignments for each domain:
  == domain 1    score: 60.6 bits;  conditional E-value: 7.7e-21
   PF00650.15  57 dgqiegvtvviDmkglslskmlwkp.isllkkilkilqdnyPerlkkilivnaPklfkvafklvkpfldektreKikfv 134
                  +++++++ vv+D ++++         +++l  ++ i q++yPerl++i+++n+P++f+v + l++++l ++t++K++++
  MMETSP1325-20131115|11698_1  10 PQPVTTFSVVMDARNWRPTLAT-AEaLRFLHGMAIIDQNHYPERLGAIYVINCPRIFAVCWGLIRSWLADETKKKVHIM 87 
                  3599*************66555.555***************************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|11700_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-07   30.1   0.0    4.9e-07   29.9   0.0    1.1  1  PF00725.17 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00725.17  3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   3.6e-11   4.9e-07      51      97 .]       1      48 [.       1      48 [. 0.97

  Alignments for each domain:
  == domain 1    score: 29.9 bits;  conditional E-value: 3.6e-11
                 --HHHHHHHHHHHCTCCCH.GG-..HHHHHHHHTT-----------EC CS
   PF00725.17 51 gldvakkilevlaeelger.ayapsplleklveagrlgrktgkgfyky 97
                 gld+  +il+ + + ++++ a+  ++ l+++v ag++grk+g+gfy +
  MMETSP1325-20131115|11700_1  1 GLDTTLSILQGWVDNYPDEpAFIVPESLKRMVAAGHYGRKSGQGFYHW 48
                 89*****************99999**********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|11699_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-07   30.8   0.2    2.3e-07   30.2   0.1    1.3  1  PF02209.14 Villin headpiece domain


Domain annotation for each model (and alignments):
>> PF02209.14  Villin headpiece domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.1   1.7e-11   2.3e-07       3      24 ..      30      51 .]      28      51 .] 0.95

  Alignments for each domain:
  == domain 1    score: 30.2 bits;  conditional E-value: 1.7e-11
                 -HHHHHHHTSS-HHHHTTS-HH CS
   PF02209.14  3 sdedFeevFgMtkeeFykLPaW 24
                 +d dF+e+F+M++ +F +LPaW
  MMETSP1325-20131115|11699_1 30 NDADFQETFNMSRAAFSALPAW 51
                 799******************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|11709_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-07   31.6   1.1    1.1e-07   31.5   0.7    1.1  1  PF11527.3 The ARF-like 2 binding protein BART
  ------ inclusion threshold ------
      0.086   12.4   0.0      0.095   12.2   0.0    1.1  1  PF08870.6 Domain of unknown function (DUF1832)


Domain annotation for each model (and alignments):
>> PF11527.3  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.7   1.6e-11   1.1e-07      28      98 ..       8      88 ..       3      93 .] 0.81

  Alignments for each domain:
  == domain 1    score: 31.5 bits;  conditional E-value: 1.6e-11
                 HHHHHHHTT--S.S-SSTTHHHHHHHHHHHHHHHHHHHHH-------THHHHH............SS-GGG----HHHHHH CS
    PF11527.3 28 FieekcivFdde.eenkleyteihkeYkelvekllesfleelgispeqfeeac.........lsesksknqaakkifqqll 98
                 F +     Fd++ ee + e++++hk+Y+el e+l+++f+e  g ++e+f e +           e+k+++q a ++++ ++
  MMETSP1325-20131115|11709_1  8 FERAVVDKFDPDgEEFSFEHQDLHKQYCELFESLVSKFIEGEGYTMEEFYEVVrahvqsggtEAEEKEHSQDASEVMSVVY 88
                 55555678999989***************************************9999988765555566666666666555 PP

>> PF08870.6  Domain of unknown function (DUF1832)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.4e-05     0.095      50     110 ..      20      81 ..       6      84 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.4e-05
    PF08870.6  50 dsgleldkktflGelediyealLkqky.gpelddeelakalrlHlerGiellaskkklaeie 110
                   ++ +++ + +  ++ +++e+l+ +   g+  + ee++++ r+H++ G    ++k ++++++
  MMETSP1325-20131115|11709_1  20 GEEFSFEHQDLHKQYCELFESLVSKFIeGEGYTMEEFYEVVRAHVQSGGTEAEEKEHSQDAS 81 
                  45556677777788999999999998889999****************98888887777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       544  (0.0397894); expected 273.4 (0.02)
Passed bias filter:                      481  (0.0351814); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.41s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|11710_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 576.15
//
Query:       MMETSP1325-20131115|11714_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|11725_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-06   26.2   0.0    7.8e-06   25.9   0.0    1.1  1  PF01590.21 GAF domain
    0.00039   20.3   0.0    0.00047   20.1   0.0    1.1  1  PF13492.1  GAF domain
    0.00093   19.6   0.0     0.0011   19.3   0.0    1.2  1  PF13185.1  GAF domain


Domain annotation for each model (and alignments):
>> PF01590.21  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   1.7e-09   7.8e-06     108     151 ..       3      49 ..       1      52 [. 0.86

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 1.7e-09
                  EEEEEE-BET....TEBEEEEEEEESS-.----HHHHHHHHHHHHHHH CS
   PF01590.21 108 sllavPllar....gkliGvlvlhnkspgrpftdddlellealaaqaa 151
                  ++l++P++a     +k++Gv++l+nk+    f++ d++l+ ++ ++a+
  MMETSP1325-20131115|11725_1   3 TILCMPIKAKaqgsEKVVGVIQLINKEE-GVFDEADEDLMGTFLDMAG 49 
                  68****6555445589************.*************999886 PP

>> PF13492.1  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0     1e-07   0.00047      82     128 ..       3      53 ..       1      54 [. 0.89

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1e-07
    PF13492.1  82 sllvvPLvage....eviGvlvlgsvpeeafteedlellellasqiavale 128
                   +l++P++a+     +v+Gv+ l  ++e+ f+e+d +l+ ++ + ++  l+
  MMETSP1325-20131115|11725_1   3 TILCMPIKAKAqgseKVVGVIQLINKEEGVFDEADEDLMGTFLDMAGPILM 53 
                  589******879999********99999**************998887666 PP

>> PF13185.1  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.5e-07    0.0011     103     146 ..       4      51 ..       1      53 [. 0.80

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 2.5e-07
                  EEEE---..---...----EEEEES------HHHHHHHHHH---HHHH CS
    PF13185.1 103 llavPlv..agg..rviGvlalaskepdafteedlelLellaeqiaia 146
                  +l++P++  a+g  +v+Gv++l +ke++ f+e+d +l+ ++ + ++ +
  MMETSP1325-20131115|11725_1   4 ILCMPIKakAQGseKVVGVIQLINKEEGVFDEADEDLMGTFLDMAGPI 51 
                  566666643444669***********************9998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 386.78
//
Query:       MMETSP1325-20131115|11735_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 298.49
//
Query:       MMETSP1325-20131115|11737_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.075   12.9   0.2       0.19   11.5   0.1    1.7  2  PF05083.8 LST-1 protein


Domain annotation for each model (and alignments):
>> PF05083.8  LST-1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.24   3.3e+03      60      71 ..      33      44 ..      21      46 .. 0.74
   2 ?   11.5   0.1   1.4e-05      0.19      22      47 ..      62      87 ..      58     100 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.24
    PF05083.8 60 dlstdyaCiars 71
                  ls +ya  a+s
  MMETSP1325-20131115|11737_1 33 QLSEEYALAAES 44
                 577788888877 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 1.4e-05
    PF05083.8 22 rvkrlerskevsglrqephyasLqqL 47
                 +++r    + ++g+rq ph asL qL
  MMETSP1325-20131115|11737_1 62 QSERASSPRGIAGSRQHPHQASLEQL 87
                 567777778899************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 724.61
//
Query:       MMETSP1325-20131115|11740_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.59
# Mc/sec: 223.39
//
Query:       MMETSP1325-20131115|11739_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.7    7.6   4.0        1.8    7.5   2.8    1.1  1  PF01299.12 Lysosome-associated membrane glycoprotein (Lamp)
        2.2    8.5   8.5        2.9    8.2   5.9    1.2  1  PF00428.14 60s Acidic ribosomal protein
        9.7    5.0  13.5         12    4.7   9.4    1.1  1  PF01690.12 Potato leaf roll virus readthrough protein


Domain annotation for each model (and alignments):
>> PF01299.12  Lysosome-associated membrane glycoprotein (Lamp)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   2.8   0.00039       1.8      80     109 ..      32      66 ..       9      69 .. 0.60

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00039
   PF01299.12  80 rceed..psptt...satpvPsPtpvp.sspa.vgnY 109
                   c     +spt+   s  p+PsP p p +sp   g+Y
  MMETSP1325-20131115|11739_1  32 SCGRRvhTSPTPslpS--PSPSPPPSPsPSPLaWGSY 66 
                  4555566677775333..3333333343333325555 PP

>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   5.9   0.00063       2.9      49      63 ..       7      20 ..       1      31 [. 0.44

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00063
   PF00428.14 49 aaaaaaaaaaaaaaa 63
                 a aaaaaaaaaaaaa
  MMETSP1325-20131115|11739_1  7 A-AAAAAAAAAAAAA 20
                 2.2222222222222 PP

>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   9.4    0.0026        12       4      25 ..      40      60 ..      37      66 .. 0.53

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0026
   PF01690.12  4 epgPk.PgPsPtPpppPqPtPeP 25
                 +p P+ P+PsP Pp  P+P+P P
  MMETSP1325-20131115|11739_1 40 SPTPSlPSPSPSPP--PSPSPSP 60
                 44444355555444..4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       625  (0.0457139); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 337.27
//
Query:       MMETSP1325-20131115|11744_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0038   15.7   0.1     0.0039   15.7   0.0    1.0  1  PF13584.1  Oxygen tolerance
  ------ inclusion threshold ------
      0.011   13.8   0.1      0.012   13.6   0.0    1.0  1  PF05510.8  Sarcoglycan alpha/epsilon
      0.047   12.9   0.1      0.054   12.7   0.1    1.0  1  PF09850.4  Uncharacterized protein conserved in bacteria (DUF2077)
       0.05   13.0   0.3      0.056   12.9   0.2    1.1  1  PF00957.16 Synaptobrevin
      0.065   12.9   0.2      0.075   12.7   0.1    1.2  1  PF05439.7  Jumping translocation breakpoint protein (JTB)
       0.11   11.8   0.1       0.13   11.6   0.0    1.0  1  PF07895.6  Protein of unknown function (DUF1673)
        1.7    8.3   5.3        2.7    7.7   3.7    1.3  1  PF13124.1  Protein of unknown function (DUF3963)
        6.5    6.8   7.0        1.9    8.5   1.3    2.0  2  PF10864.3  Protein of unknown function (DUF2663)


Domain annotation for each model (and alignments):
>> PF13584.1  Oxygen tolerance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.3e-06    0.0039     379     446 ..       2      67 ..       1      72 [] 0.75

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 2.3e-06
    PF13584.1 379 ikVkkgagsaasssenkqsvkslgkdiryiktkaelkpikeapffgsalfylllllplllivlllily 446
                  + V+kg+++++ ++ +k+ vk+++++ ++ + +++l ++ e+ +f s +++++++++l++++ +  l+
  MMETSP1325-20131115|11744_1   2 LRVEKGSKEKQYETLKKEIVKKEEQTRQFHQAHSQLRMKMERRLFVSQVVVTFVVALLVVVLSA--LR 67 
                  78***********999998999888888888899999988888888887777755544444433..33 PP

>> PF05510.8  Sarcoglycan alpha/epsilon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   7.2e-06     0.012     258     318 ..       9      68 ..       2      70 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 7.2e-06
    PF05510.8 258 kegkkqkeeeklskpsgdgileedkeyappreeveerdyldeivitlaipllvalllvllL 318
                  ke + ++ ++++ k + +   +++     +r ++e+r ++ ++v+t+++ llv++l +l L
  MMETSP1325-20131115|11744_1   9 KEKQYETLKKEIVKKEEQTRQFHQAH-SQLRMKMERRLFVSQVVVTFVVALLVVVLSALRL 68 
                  33333333344444444455667766.6788899********************9977655 PP

>> PF09850.4  Uncharacterized protein conserved in bacteria (DUF2077)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   3.1e-05     0.054     148     203 ..      11      67 ..       5      70 .. 0.46

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 3.1e-05
    PF09850.4 148 rlyellrkr..eeepa..el.sphwqgaaaarrrlkrrrlpvwvilalalllllllylgls 203
                  + ye+l+k   ++e++  ++ + h+q   + +rrl    + + v+++++++ll++++ +l+
  MMETSP1325-20131115|11744_1  11 KQYETLKKEivKKEEQtrQFhQAHSQLRMKMERRL----FVSQVVVTFVVALLVVVLSALR 67 
                  45666666643223330033333333333333333....3333555555566666655555 PP

>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   3.3e-05     0.056      43      83 ..      23      63 ..       8      68 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.3e-05
   PF00957.16 43 LqesaqqFkkqarklkrkmwwknmklliililvvlililii 83
                  +e+++qF++   +l+ km  + +   +++++vv++l++++
  MMETSP1325-20131115|11744_1 23 KEEQTRQFHQAHSQLRMKMERRLFVSQVVVTFVVALLVVVL 63
                 5789********************99999999999999886 PP

>> PF05439.7  Jumping translocation breakpoint protein (JTB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   4.4e-05     0.075      66     100 ..      35      69 ..       5      71 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.4e-05
                  E--HHHHS--XXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF05439.7  66 sCrsalierhefykfevsvvaialvsallviirkr 100
                  s    ++er++f    v+++++al+ ++l+  r r
  MMETSP1325-20131115|11744_1  35 SQLRMKMERRLFVSQVVVTFVVALLVVVLSALRLR 69 
                  23345789*****************9999998865 PP

>> PF07895.6  Protein of unknown function (DUF1673)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.5e-05      0.13      22      76 ..       6      63 ..       2      69 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7.5e-05
    PF07895.6 22 t.rqsinpenfeadnqsrgk.aknsdlkesgwlnkrsnrlLlasifltlvlf.lvisl 76
                 + +++ ++e ++ ++ ++++   +  +  s++  k + rl++ ++++t+v++ lv+ l
  MMETSP1325-20131115|11744_1  6 KgSKEKQYETLKKEIVKKEEqTRQFHQAHSQLRMKMERRLFVSQVVVTFVVAlLVVVL 63
                 54678899999999999999555555666677777799*************9555544 PP

>> PF13124.1  Protein of unknown function (DUF3963)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.7    0.0016       2.7      23      37 ..      52      66 ..      50      68 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0016
    PF13124.1 23 ITfcfALlVVvlvaL 37
                 +Tf+ ALlVVvl aL
  MMETSP1325-20131115|11744_1 52 VTFVVALLVVVLSAL 66
                 7***********998 PP

>> PF10864.3  Protein of unknown function (DUF2663)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.3    0.0011       1.9      83     102 ..       7      26 ..       1      43 [. 0.76
   2 ?    1.8   0.3      0.13   2.3e+02      15      38 ..      40      63 ..      34      71 .. 0.60

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0011
    PF10864.3  83 eKaEkefhaLRcEiiekSkd 102
                    +Ek+++ L++Ei++k ++
  MMETSP1325-20131115|11744_1   7 GSKEKQYETLKKEIVKKEEQ 26 
                  4579***********99764 PP

  == domain 2    score: 1.8 bits;  conditional E-value: 0.13
    PF10864.3 15 klekqtlllqwaslivlllfviyl 38
                 k+e+++++ q++  +v++l+v++l
  MMETSP1325-20131115|11744_1 40 KMERRLFVSQVVVTFVVALLVVVL 63
                 456666666665555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1959  (0.143286); expected 273.4 (0.02)
Passed bias filter:                     1383  (0.101156); expected 273.4 (0.02)
Passed Vit filter:                       161  (0.0117759); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.51s 00:00:00.97 Elapsed: 00:00:00.61
# Mc/sec: 282.85
//
Query:       MMETSP1325-20131115|11747_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.053   12.9   0.0       0.07   12.5   0.0    1.2  1  PF07202.8 T-complex protein 10 C-terminus


Domain annotation for each model (and alignments):
>> PF07202.8  T-complex protein 10 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.2e-06      0.07      75     115 ..      19      60 ..      12      61 .] 0.81

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.2e-06
    PF07202.8  75 qtekrfkDGskeilfpdgtvkilnkdge.eeivypDGtvvrv 115
                   +e + +DG+  ++  dg+    ++d+  ee+++pDG v+++
  MMETSP1325-20131115|11747_1  19 AMEMMLPDGKVVVVNADGATSAEQSDEPiEEVMMPDGKVLKM 60 
                  568888999999999999888877776579999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       450  (0.032914); expected 273.4 (0.02)
Passed bias filter:                      410  (0.0299883); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|11746_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      333  (0.0243563); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 622.03
//
Query:       MMETSP1325-20131115|11748_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 435.26
//
Query:       MMETSP1325-20131115|11741_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-11   43.4   0.3      6e-09   35.6   0.3    2.3  2  PF03227.11 Gamma interferon inducible lysosomal thiol reductase (GILT)
    0.00011   22.1   0.0    0.00016   21.5   0.0    1.2  1  PF13462.1  Thioredoxin


Domain annotation for each model (and alignments):
>> PF03227.11  Gamma interferon inducible lysosomal thiol reductase (GILT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0016        11      22      49 ..      58      85 ..      37      97 .. 0.82
   2 !   35.6   0.3   8.8e-13     6e-09      53     105 ..     120     171 ..     100     174 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0016
   PF03227.11 22 lvpavvkkdlsdvidlklvpfGkakvve 49
                 l++++  +++ d++d++++p+G+a   +
  MMETSP1325-20131115|11741_1 58 LNSTLHAEGVIDILDFEFYPWGNAYYAQ 85
                 56677788999************98765 PP

  == domain 2    score: 35.6 bits;  conditional E-value: 8.8e-13
   PF03227.11  53 vvtCqHGeeECklNklqaCvietlkakklqlklitClekkkklseevkCleel 105
                  ++ CqHG++EC++N l+ C++  +++  +++++ +Cle+++    e+ C++el
  MMETSP1325-20131115|11741_1 120 TILCQHGADECSVNLLEGCAKTLYPDVLTYMDFAVCLESNYPDGGEA-CANEL 171
                  479***********************************997766664.88876 PP

>> PF13462.1  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   2.4e-08   0.00016     102     149 ..     169     218 ..     147     226 .. 0.81

  Alignments for each domain:
  == domain 1    score: 21.5 bits;  conditional E-value: 2.4e-08
    PF13462.1 102 ealgk.deefeacledeklqalveadseea.kaagiestPtfiingkkve 149
                  ++lg+  +++eac +de+++a++   ++++   a+i +tPt++ing +++
  MMETSP1325-20131115|11741_1 169 NELGLsWSDIEACTTDEEAAAKISVADANVtAWADIPGTPTIFINGAQLK 218
                  5555535789*************97777774889************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1150.25
//
Query:       MMETSP1325-20131115|11755_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       155  (0.011337); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|11749_1  [L=295]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-16   59.3   3.2      2e-16   59.3   2.2    1.5  2  PF01302.20 CAP-Gly domain
    2.1e-07   30.0   0.1    1.5e-06   27.3   0.0    2.4  2  PF00240.18 Ubiquitin family
  ------ inclusion threshold ------
       0.11   12.2   0.4       0.24   11.2   0.3    1.5  1  PF08753.6  NikR C terminal nickel binding domain


Domain annotation for each model (and alignments):
>> PF01302.20  CAP-Gly domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0       2.8   1.3e+04      11      18 ..     147     154 ..     144     154 .. 0.78
   2 !   59.3   2.2   4.4e-20     2e-16       1      68 [.     207     274 ..     207     275 .. 0.94

  Alignments for each domain:
  == domain 1    score: -4.2 bits;  conditional E-value: 2.8
                  S-B----- CS
   PF01302.20  11 kerrGtvr 18 
                  + r+Gtvr
  MMETSP1325-20131115|11749_1 147 EARKGTVR 154
                  67899998 PP

  == domain 2    score: 59.3 bits;  conditional E-value: 4.4e-20
                  -----EESSSS-B----------S.S--.---B----SS--------------S---TT----B-GGGE CS
   PF01302.20   1 vgkrvevdpekerrGtvryvGpvptfks.giwvGveldeprGkndGsvdGvrYFeckpkrGvFvkperv 68 
                  vg r+e+ ++  rrG v +vG+v + +  g wvGv +dep+Gk++G v+G+  Fec +++G F++ ++v
  MMETSP1325-20131115|11749_1 207 VGMRCEC-QPGARRGEVAFVGEVAGLSGgGHWVGVRFDEPVGKSNGIVKGETIFECMERYGGFLRGKNV 274
                  89*****.778*************9999568*********************************99887 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   3.3e-10   1.5e-06       2      63 ..      48     115 ..      47     117 .. 0.79
   2 ?   -1.6   0.0      0.33   1.5e+03      42      59 ..     127     144 ..     124     145 .. 0.83

  Alignments for each domain:
  == domain 1    score: 27.3 bits;  conditional E-value: 3.3e-10
                  ESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE--..-...BE.TTTSBTTTTTT-TTEEEE CS
   PF00240.18   2 tlsgktitlevepsdtvselKekieekegipvdqqrLiysG..k...vL.eDdrtlseyniqdgstlh 63 
                  +l++k i+l+++  +t+ elK++++++ g p+++qrLi+    +    + +D++ ++ y +++g t+h
  MMETSP1325-20131115|11749_1  48 NLMKKMIELKFDLHTTIGELKARLHMHCGTPACSQRLILRDggQdiaHMdDDSKMMGFYSVESGMTIH 115
                  678899********************************964223222356677777778888887777 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.33
                  --BETTTSBTTTTTT-TT CS
   PF00240.18  42 GkvLeDdrtlseyniqdg 59 
                  G  LeD + ++ y+++d+
  MMETSP1325-20131115|11749_1 127 GGGLEDVSLIQKYKMDDE 144
                  667999999******986 PP

>> PF08753.6  NikR C terminal nickel binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   5.2e-05      0.24      11      61 ..      45      98 ..      39     112 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.2e-05
                 TSCCHHHHHHHHHHHTGGC...EEEEEEEECSSSEEEEEEEEE--HHHHHHHHH CS
    PF08753.6 11 ekrelskrLtdiqHeysdl...iisslhvhldednClEvivlkGeaeeieeLad 61
                 ++++l+k++++++++ +++     + lh+h  +  C   ++l+  +++i+++ d
  MMETSP1325-20131115|11749_1 45 THSNLMKKMIELKFDLHTTigeLKARLHMHCGTPACSQRLILRDGGQDIAHMDD 98
                 5689*************99444589******************99999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.38s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 1333.82
//
Query:       MMETSP1325-20131115|11754_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-05   23.5   0.4    4.3e-05   22.7   0.0    1.5  2  PF05186.8 Dpy-30 motif


Domain annotation for each model (and alignments):
>> PF05186.8  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1      0.54   7.4e+03      22      28 ..       2       8 ..       2       8 .. 0.82
   2 !   22.7   0.0   3.1e-09   4.3e-05       2      23 ..      53      74 ..      52      76 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.6 bits;  conditional E-value: 0.54
    PF05186.8 22 akeRPeD 28
                 a e+P+D
  MMETSP1325-20131115|11754_1  2 ADEKPAD 8 
                 6799*98 PP

  == domain 2    score: 22.7 bits;  conditional E-value: 3.1e-09
    PF05186.8  2 arkYLnktvaPiLlqGLtelak 23
                  r+YL++tv+PiLl+G+ +l k
  MMETSP1325-20131115|11754_1 53 IRAYLDQTVVPILLDGMSALVK 74
                 59****************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       602  (0.0440316); expected 273.4 (0.02)
Passed bias filter:                      468  (0.0342305); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.42s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 613.47
//
Query:       MMETSP1325-20131115|11757_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-16   59.3   0.0    3.6e-16   58.9   0.0    1.1  1  PF00270.24 DEAD/DEAH box helicase
      1e-08   35.1   0.0    1.5e-08   34.5   0.0    1.2  1  PF04851.10 Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   5.3e-20   3.6e-16      17     166 ..       7     158 ..       2     159 .] 0.84

  Alignments for each domain:
  == domain 1    score: 58.9 bits;  conditional E-value: 5.3e-20
                  EEEEC-TT---HHHHHHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHHHTTTSS.EEEEETTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHH....CCHHT...............TTEEEEEECTHHHHHCTTTHHHHHHHHHHSHHTTTSEEEEEESS- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00270.24  17 vlvaaeTGsGKTlaflipvlqilletlkkttikkalivaPtreLaeqtlnnlkkfkkypklrvlliiggvalardqlsvldngvdivvgTpgrlddlvst....gklnl...............sqvrllVlDEadrllsqgfsdqlnqilqilcdgkrlqvivlSATl 166
                   +v+a+T+sGKT +     ++         t   +l+v+P++ L+ q++  ++k++     +v+l++   + +    ++ d++ ++vvgTp +l + +s+                        +++++ V+DE++ l+  + ++ l+++++++    ++++++lSAT+
  MMETSP1325-20131115|11757_1   7 AVVCAPTSSGKTVISTYVTVKVA-AM--AGTGGGVLFVVPSEPLVWQVAAMFEKLMPG---QVALCTNLLSYR---PEKADGQSQVVVGTPSSLESALSKvrglV---GievmgkndyaqmlggFEFKYAVFDEVHALDG-EEGAALQRLMRLV----ECPFLALSATI 158
                  689*********99998888755.43..35899***********************98...9****9988855...556799*****************965441...146667777789999899**************.7788888888776....689*******7 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.0   2.2e-12   1.5e-08      27     182 ..       6     158 ..       2     159 .] 0.72

  Alignments for each domain:
  == domain 1    score: 34.5 bits;  conditional E-value: 2.2e-12
   PF04851.10  27 rglivmaTGtGKTlvaasliarlar......kflflvprkelleqaleefkkfeskkiefekkniavakkdklfgeeqkkskdkeekkkkdkeiilttiqklhkaleeeeendesks..........eslealldefdviiiDEaHrlsakkkyreile........fkkafllglTATp 182
                  ++++ ++T +GKT++++ +  ++a        +lf+vp++ l+ q    f+k    ++++                 ++ ++++ ek + ++++++ t ++l++al++        +            +   + ef++ ++DE+H l  ++  +++++        f     l l+AT+
  MMETSP1325-20131115|11757_1   6 SAVVCAPTSSGKTVISTYVTVKVAAmagtggGVLFVVPSEPLVWQVAAMFEKLMPGQVAL----------------CTNLLSYRPEKADGQSQVVVGTPSSLESALSKVRG-----LvgievmgkndYAQMLGGFEFKYAVFDEVHALDGEEG-AALQRlmrlvecpF-----LALSATI 158
                  5677899**********87777777888899*******************8887777777................45556777777777777777777777777765332.....1334445566445555666899***********9994.44444333433333.....9999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       318  (0.0232592); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.37s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 747.10
//
Query:       MMETSP1325-20131115|11771_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 193.55
//
Query:       MMETSP1325-20131115|11774_1  [L=311]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.37s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 1461.31
//
Query:       MMETSP1325-20131115|11788_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      6e-11   41.4   0.4    6.8e-11   41.2   0.3    1.0  1  PF05577.7 Serine carboxypeptidase S28
     0.0084   15.0   0.0     0.0084   15.0   0.0    1.0  1  PF12736.2 Cell-cycle sustaining, positive selection,


Domain annotation for each model (and alignments):
>> PF05577.7  Serine carboxypeptidase S28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.3   9.9e-15   6.8e-11     114     167 ..       5      61 ..       3      63 .] 0.87

  Alignments for each domain:
  == domain 1    score: 41.2 bits;  conditional E-value: 9.9e-15
    PF05577.7 114 kwivfGgSYsgsLaawaRkkyPelvvgavaSSaPllakvdfk...eylevveeslak 167
                  ++++ GgSY+g L+a +R  yP +v+ a ++SaP++  +  +   ey+e v +s+++
  MMETSP1325-20131115|11788_1   5 PVVTIGGSYPGWLSAMMRLRYPGVVDIAYSASAPMYFYTQEVgeyEYYELVTQSAEN 61 
                  79*********************************8755544444*******99875 PP

>> PF12736.2  Cell-cycle sustaining, positive selection,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.2e-06    0.0084      50      92 ..       4      46 ..       1      62 [. 0.87

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.2e-06
    PF12736.2 50 gpklaIPlsYpGkFellpreqvFesVeell.arvfpervlvted 92
                  p ++I  sYpG+   + r  ++++V +++ +++ p +++ +e 
  MMETSP1325-20131115|11788_1  4 CPVVTIGGSYPGWLSAMMRL-RYPGVVDIAySASAPMYFYTQEV 46
                 5899***************8.**********9999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|11783_1  [L=186]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-12   46.9   0.0    7.3e-12   45.8   0.0    1.6  1  PF00034.16 Cytochrome c
    7.5e-07   29.1   3.5    5.1e-06   26.4   2.4    2.1  1  PF13442.1  Cytochrome C oxidase, cbb3-type, subunit III
  ------ inclusion threshold ------
      0.092   12.2   0.0       0.17   11.4   0.0    1.3  1  PF02167.10 Cytochrome C1 family


Domain annotation for each model (and alignments):
>> PF00034.16  Cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   1.6e-15   7.3e-12       1      88 [.      28     124 ..      28     127 .. 0.82

  Alignments for each domain:
  == domain 1    score: 45.8 bits;  conditional E-value: 1.6e-15
                  X--HHHHHC-TTTTT--SSS----S...--HCCHHHHT-HHHHHHHHHH------SS-GGGHHHHGGGGGGG-..........---HHHHHHHHHHHH CS
   PF00034.16   1 aarGkelftanCaaCHgaggggakqggapnlsgaaerysadsiaairanprqvsapavafekkpltaempark..........qltdqeiadlaaYlm 88 
                  +a+G+++f+++C+aCH +++gg +++ +pnl g+  r+ ++s++ +++++   s  a+       +   p +             +++e++dl+aYl 
  MMETSP1325-20131115|11783_1  28 VAKGAKIFKTKCSACHTVEAGGSNKQ-GPNLHGLFGRAAGSSDGYSYSAAMSGSGVAWGEDSLMEFLLAPKKYvagtkmafagIKKPAERKDLVAYLN 124
                  59******99*******999999888.9****************999999888887666666555555543337777777777999**********97 PP

>> PF13442.1  Cytochrome C oxidase, cbb3-type, subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   2.4   1.1e-09   5.1e-06       2      67 .]      27     123 ..      26     123 .. 0.64

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 1.1e-09
                  HCH---HHHHHCTTTTH-.....--TT---TTSHHHHH......................HHHHCHHH---....------TTT--HHHHHHHHHHH CS
    PF13442.1   2 aaaaGaalynanCaaCHg.....sggagpslagdawep......................dalkkiiknGk....gaMPafggqlsdeeiealaaYl 67 
                  ++a+Ga++++ +C+aCH+     s+++gp+l+g   ++                      d+l ++++  k    g   af+g  +++e+++l+aYl
  MMETSP1325-20131115|11783_1  27 DVAKGAKIFKTKCSACHTveaggSNKQGPNLHGLFGRAagssdgysysaamsgsgvawgeDSLMEFLLAPKkyvaGTKMAFAGIKKPAERKDLVAYL 123
                  789***************6643333445666633222112233334444444444444449999999988834443455788899999999999997 PP

>> PF02167.10  Cytochrome C1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.7e-05      0.17      15      33 ..      28      46 ..      21      52 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.7e-05
                 HH---HHHHHTTTTT---T CS
   PF02167.10 15 lqrGaqvykevCsaCHslk 33
                 + +Ga+++k  CsaCH ++
  MMETSP1325-20131115|11783_1 28 VAKGAKIFKTKCSACHTVE 46
                 679*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 825.41
//
Query:       MMETSP1325-20131115|11789_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.64
# Mc/sec: 205.94
//
Query:       MMETSP1325-20131115|11791_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.051   12.8   0.5      0.055   12.8   0.3    1.0  1  PF00510.13 Cytochrome c oxidase subunit III


Domain annotation for each model (and alignments):
>> PF00510.13  Cytochrome c oxidase subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3     4e-06     0.055      89     124 ..       4      39 ..       2      48 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4e-06
   PF00510.13  89 llflalfwaffhsslsPtvelgavWpPvgikvlnpl 124
                    f++  wa   s++ P+++lg+ W   + ++ +p+
  MMETSP1325-20131115|11791_1   4 SWFVSCAWAELASAIRPSIDLGSAWFTSSTSPSSPV 39 
                  5799*********************88777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|11792_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-11   41.8   0.0    1.1e-10   41.2   0.0    1.3  1  PF03992.11 Antibiotic biosynthesis monooxygenase
  ------ inclusion threshold ------
        1.6    8.5   5.3        2.8    7.7   3.7    1.4  1  PF00746.16 Gram positive anchor


Domain annotation for each model (and alignments):
>> PF03992.11  Antibiotic biosynthesis monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   1.6e-14   1.1e-10       1      76 [.      34     108 ..      34     110 .. 0.95

  Alignments for each domain:
  == domain 1    score: 41.2 bits;  conditional E-value: 1.6e-14
                  -EEEEEEEEEEGGHHHHHHHHHHHHHHHHHTT-----EEEEEECTTSCEEEEEEEEESSHHHHHHHHTSHHHHHHH CS
   PF03992.11   1 mvivvnefkvkpgaeeafeeafaeaaesllaeepGflgyellrstddpdevvvieeWeseaafrahlksphfkaah 76 
                  +v++v+++++++ + eaf++a +  a  + ++epG++++++l+ +   ++++++e + + +a+  h   ph+ka+ 
  MMETSP1325-20131115|11792_1  34 PVTLVVTVEIEESRIEAFLKAMEIDAVGS-RKEPGCMRFDVLKVQGTSNKFMFYEMYVDSDAVAFHKEQPHYKAWS 108
                  689******************9998888*.7************999****************************85 PP

>> PF00746.16  Gram positive anchor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.7    0.0004       2.8      18      38 ..       5      26 ..       2      27 .. 0.91

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0004
                 XXXXXXXX.XXXXXXXXXXXXX CS
   PF00746.16 18 ifltlaGl.llaaggglllvkr 38
                 ++l++aG+ +l+++ggl+l+k+
  MMETSP1325-20131115|11792_1  5 NLLLAAGIgALLGIGGLALKKK 26
                 78999***9***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.40s 00:00:00.85 Elapsed: 00:00:00.59
# Mc/sec: 666.11
//
Query:       MMETSP1325-20131115|11795_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       394  (0.028818); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1054.40
//
Query:       MMETSP1325-20131115|11801_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.5    8.2   3.1       0.48    8.2   2.1    1.0  1  PF02724.9 CDC45-like protein


Domain annotation for each model (and alignments):
>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   2.1   3.5e-05      0.48     128     177 ..      24      65 ..       5      99 .. 0.59

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 3.5e-05
    PF02724.9 128 keeee.eesdedsdseddeeeeessasekrksesdedeeddddeededeeq 177
                  ++ ++  + d+dsds++d++++ s+as+          +++++++d+ e  
  MMETSP1325-20131115|11801_1  24 SDTDGhGNGDSDSDSHSDSDSDASNASD---------YSQARKTNDGGEGL 65 
                  2222245556666666666666666655.........33333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 571.05
//
Query:       MMETSP1325-20131115|11802_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-23   83.1   9.1    1.5e-23   83.0   6.3    1.0  1  PF03179.10 Vacuolar (H+)-ATPase G subunit
     0.0054   15.8   5.3     0.0054   15.8   3.7    1.5  1  PF12072.3  Domain of unknown function (DUF3552)
      0.008   15.8   1.7      0.012   15.3   1.2    1.4  1  PF06533.7  Protein of unknown function (DUF1110)
  ------ inclusion threshold ------
      0.058   12.9   1.0      0.066   12.7   0.7    1.1  1  PF05127.9  Helicase
       0.16   11.5   4.1       0.17   11.4   2.5    1.5  1  PF06188.7  HrpE/YscL/FliH and V-type ATPase subunit E
        1.5    8.5  10.5        3.9    7.1   7.3    1.7  1  PF00430.13 ATP synthase B/B' CF(0)


Domain annotation for each model (and alignments):
>> PF03179.10  Vacuolar (H+)-ATPase G subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   6.3   6.4e-27   1.5e-23       3     104 ..       4     103 ..       2     104 .. 0.95

  Alignments for each domain:
  == domain 1    score: 83.0 bits;  conditional E-value: 6.4e-27
                  -----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S-XXXXXXXXXHHHHHHXXXXXXHHHHHHHHHHHHHHHHHHHHHXXXXX CS
   PF03179.10   3 sqgIqqLLqAekeAaeiveeArkrkakrLkqAkeeAekEieeyrakkekefkekeaevsgseeelekkieketeekieelkksvkknkekvvkellklvldv 104
                  ++gI++L++Aek+A++iv++Ar++k++r+kqAk+eA + +e yr +k++ f++k a  +    +  ++ie+et+++i+++k+++++nk++ ++ +++lv++v
  MMETSP1325-20131115|11802_1   4 KKGIEHLMEAEKRATKIVKDAREQKTERMKQAKTEAGELVEGYRLEKDAAFNSKSADLLV--MDDGASIEAETAQEINQMKADYAANKQATIDYMMNLVTTV 103
                  79*******************************************************994..455678********************************98 PP

>> PF12072.3  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   3.7   2.4e-06    0.0054      27      80 ..       8      61 ..       1      67 [. 0.90

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 2.4e-06
    PF12072.3 27 kkiseAeeeAkkiieeAkkeAeakkkealleakeeihklreelEkelkerrkel 80
                 +++ eAe++A+ki+++A+++  +  k+a +ea e +  +r e ++ ++++ ++l
  MMETSP1325-20131115|11802_1  8 EHLMEAEKRATKIVKDAREQKTERMKQAKTEAGELVEGYRLEKDAAFNSKSADL 61
                 56789******************************************9999887 PP

>> PF06533.7  Protein of unknown function (DUF1110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.2   5.2e-06     0.012      57     113 ..      38      94 ..       4      99 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 5.2e-06
    PF06533.7  57 algaLedasrdLasamslmkaakLLalhGgsvnpstilseigrlgdeylaernAlik 113
                    g+L++  r    a    k+a+LL++  g+  ++ + +ei+++ ++y+a+++A+i 
  MMETSP1325-20131115|11802_1  38 EAGELVEGYRLEKDAAFNSKSADLLVMDDGASIEAETAQEINQMKADYAANKQATID 94 
                  35778888887778888899********66666677889***************985 PP

>> PF05127.9  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.7   2.9e-05     0.066      38     111 ..       6      79 ..       2      99 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.9e-05
    PF05127.9  38 nvktlfeflekglealglkeeekkekaekaevrvnkqrieyiapdellklkeqadllvvDEAAaiplpllkkll 111
                   +++l+e  +++ + ++  +e+k+e+ ++a++++ +    y   ++++ ++++adllv+D  A+i+ ++ +++ 
  MMETSP1325-20131115|11802_1   6 GIEHLMEAEKRATKIVKDAREQKTERMKQAKTEAGELVEGYRLEKDAAFNSKSADLLVMDDGASIEAETAQEIN 79 
                  56667777767766666666777777777888888888888888888877889*************99988875 PP

>> PF06188.7  HrpE/YscL/FliH and V-type ATPase subunit E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.5   7.6e-05      0.17      25      59 ..      10      44 ..       2      83 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7.6e-05
    PF06188.7 25 qlaeslrarelleeArqqAeelleeaeekaeallq 59
                  +++++ra +++++Ar+q +e +++a+ +a +l +
  MMETSP1325-20131115|11802_1 10 LMEAEKRATKIVKDAREQKTERMKQAKTEAGELVE 44
                 33444555555555555555555555555555555 PP

>> PF00430.13  ATP synthase B/B' CF(0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   7.3    0.0017       3.9      39     109 ..      10      83 ..       3      95 .. 0.53

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0017
   PF00430.13  39 ikeaeerlke.aaellaeaeqqleqArkeaseiienakkeaqklkeeilae..aekdierllesakaeiekeke 109
                  + eae+r+ + ++ + ++ +++++qA++ea e++e  + e++ +++++ a+  +  d  ++++++++ei+++k 
  MMETSP1325-20131115|11802_1  10 LMEAEKRATKiVKDAREQKTERMKQAKTEAGELVEGYRLEKDAAFNSKSADllVMDDGASIEAETAQEINQMKA 83 
                  44555554441344555555566666666666666555555555555555422244555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1032  (0.0754827); expected 273.4 (0.02)
Passed bias filter:                      540  (0.0394968); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.42s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 461.84
//
Query:       MMETSP1325-20131115|11800_1  [L=363]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-39  136.0   1.4    1.7e-39  135.3   1.0    1.2  1  PF06966.7 Protein of unknown function (DUF1295)


Domain annotation for each model (and alignments):
>> PF06966.7  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.3   1.0   1.3e-43   1.7e-39       5     168 ..      74     235 ..      70     241 .. 0.91

  Alignments for each domain:
  == domain 1    score: 135.3 bits;  conditional E-value: 1.3e-43
    PF06966.7   5 slltkssslvDvlwgvlfvilavltlllsea.aklrrllvllLvvlWglRLalhllrrtlkkgeDkryeelrkelgktiallsllvvfvlQavllylvslpvllaaaskeeq...alkaldviglalwlvgivlealaDqQlsafkkdpankgkvldsGLwrysRHPN 168
                  +++  +++  D +++++ + l+++ ++ ++a +++r++++  +v++W++RL+ +l+ r+ k g D r+ e++k+        ++++v+ +Q ++++l +lpv +++a+  ++   +l++ld++g alw vg+++e+++D+Q+s f +dp+nkgk++++GLwrysRHPN
  MMETSP1325-20131115|11800_1  74 AAIYDTEHYFDLTGSITYISLTIYSFVANSAwKSVRSIVLCSMVLVWAMRLGSFLYGRIKKAGSDDRFIEIKKSK------VRFFNVWSMQGIWVLLTALPVFTTNANVAARdsvPLGVLDYVGFALWAVGFGIEIVSDKQKSWFNADPQNKGKFINVGLWRYSRHPN 235
                  5666778899*****************98887899***********************************99943......59*******************99987554446679**************************************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.39s 00:00:01.03 Elapsed: 00:00:00.57
# Mc/sec: 1499.79
//
Query:       MMETSP1325-20131115|11810_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|11812_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 400.93
//
Query:       MMETSP1325-20131115|11816_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.8    8.2   7.7       0.19   11.3   0.6    2.3  2  PF14046.1 Nuclear receptor repeat


Domain annotation for each model (and alignments):
>> PF14046.1  Nuclear receptor repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.6   1.4e-05      0.19      17      36 ..      25      44 ..      21      54 .. 0.74
   2 ?    0.2   0.7      0.04   5.5e+02      30      36 ..      63      69 ..      60      71 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.4e-05
    PF14046.1 17 ltSAkQthaAPearlgapwW 36
                 ltSA Q  aA +ar++ p  
  MMETSP1325-20131115|11816_1 25 LTSASQATAALRARPRQPAT 44
                 8*********6676666543 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.04
    PF14046.1 30 rlgapwW 36
                 r +apwW
  MMETSP1325-20131115|11816_1 63 RAAAPWW 69
                 6789*** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 520.18
//
Query:       MMETSP1325-20131115|11820_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 349.47
//
Query:       MMETSP1325-20131115|11826_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.06   13.2   0.0       0.07   13.0   0.0    1.3  1  PF10262.4 Rdx family


Domain annotation for each model (and alignments):
>> PF10262.4  Rdx family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.1e-06      0.07      38      62 ..      44      69 ..       8      86 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 5.1e-06
                 E------EEEEE-.--EEEETTT--- CS
    PF10262.4 38 qpgtgGaFeVtln.geliwsrkekgg 62
                  pg++G Fe+tl  g+li+s+   +g
  MMETSP1325-20131115|11826_1 44 DPGKTGNFEITLPdGTLIHSKQAGKG 69
                 589*********77******987664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 436.14
//
Query:       MMETSP1325-20131115|11827_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 937.24
//
Query:       MMETSP1325-20131115|11830_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|11832_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.5    8.5   7.6        3.7    7.2   5.3    1.5  1  PF07382.6 Histone H1-like nucleoprotein HC2


Domain annotation for each model (and alignments):
>> PF07382.6  Histone H1-like nucleoprotein HC2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.3   0.00027       3.7      57     146 ..       5      81 ..       1      96 [. 0.37

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00027
    PF07382.6  57 kkvaakkaaakkaavkkavakkvvakkkvakK..avAKKaaakKvvakkvvakKtvakkaaaakKpaakkav.akkaaarKaaakKavaKkaa 146
                  k+va ++ aa+   +kka  ++ +a+k+  k     A K +   ++                 kKp  kk   a+   +rKa a+  va  a 
  MMETSP1325-20131115|11832_1   5 KNVADREKAARDERLKKATEERNAARKASLKPgpGGAVKLPGLGAAL----------------KKPDEKKDLfAQFEESRKADAATIVAEMAS 81 
                  33333444444444444444444444433332112233333333333................333333333333334444444333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       540  (0.0394968); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 728.69
//
Query:       MMETSP1325-20131115|11836_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.50
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|11837_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      103  (0.00753365); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|11838_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 474.38
//
Query:       MMETSP1325-20131115|11839_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 763.84
//
Query:       MMETSP1325-20131115|11840_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0015   17.9   1.8     0.0018   17.5   1.2    1.1  1  PF05757.6 Oxygen evolving enhancer protein 3 (PsbQ)


Domain annotation for each model (and alignments):
>> PF05757.6  Oxygen evolving enhancer protein 3 (PsbQ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   1.2   1.3e-07    0.0018      13      68 ..      22      75 ..      11      87 .. 0.72

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 1.3e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX-.-S-EE------- CS
    PF05757.6 13 rrsglvvrasaeeaeqqtsRravlgslvAtalagaasaqavlaa.aalikvglpdpr 68
                   ++++vr sa  +++q+sRr+v g ++A++ a+a +a+++la  +  i+ +    +
  MMETSP1325-20131115|11840_1 22 SAGRTAVRMSA--EPEQMSRRSVFG-AMAAGFAAAVAAEPALAYdPRNIEAAKLSAP 75
                 45667899999..8889********.9999999888888888865555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 871.40
//
Query:       MMETSP1325-20131115|11844_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-17   63.8   0.0    1.5e-17   63.5   0.0    1.1  1  PF00069.20 Protein kinase domain
    3.7e-05   22.8   0.0    5.2e-05   22.3   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
       0.13   11.5   1.9       0.23   10.7   1.3    1.3  1  PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
       0.67    7.9   7.1       0.87    7.6   5.0    1.2  1  PF08553.5  VID27 cytoplasmic protein
        2.7    5.6  17.0        3.1    5.4  11.8    1.1  1  PF04147.7  Nop14-like family
        3.7    5.3  10.2        4.3    5.1   7.1    1.1  1  PF02724.9  CDC45-like protein
        6.2    5.0  16.7        7.5    4.7  11.6    1.1  1  PF03344.10 Daxx Family
          7    5.1  11.6         11    4.4   8.0    1.3  1  PF03985.8  Paf1
        9.2    5.3   8.5         13    4.8   5.9    1.1  1  PF03353.10 Ras-mediated vulval-induction antagonist
        9.6    4.0   8.5         12    3.7   5.9    1.1  1  PF05327.6  RNA polymerase I specific transcription initiation factor RRN3


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   1.1e-20   1.5e-17     156     260 .]       1     100 [.       1     100 [. 0.96

  Alignments for each domain:
  == domain 1    score: 63.5 bits;  conditional E-value: 1.1e-20
                  SS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
   PF00069.20 156 ttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltaeeilkhpwl 260
                  +t++gt+eY++PE+++ +k +tk+vD W+lGv+++ell g++pf g++ ++ le++++i ++k++++        e  k++i+ l+e d   R+ + ++  h w+
  MMETSP1325-20131115|11844_1   1 QTFCGTPEYLPPEIVQ-RKPHTKRVDCWALGVVVFELLVGHTPFVGDDAQNTLEIYHRITEGKIDFPGLVN----ELPKQVISMLCEVDDLVRPEISSVAPHAWF 100
                  589*************.*************************************************98866....889************************998 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   3.8e-08   5.2e-05     170     254 ..       8      93 ..       4      97 .. 0.75

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 3.8e-08
                  GGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHH..HTT-BS---TTSBHHHHHHHHHHT-SSGGGS--HHH CS
   PF07714.12 170 kWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlell..kegkrlekpekcpeelyelmkqCweeepeeRptfke 254
                  ++++pE++++k  t++ D W+ Gv+++E++  g++p+ g +++++le     ++ +++ p  ++e  +++++  +e +   Rp++++
  MMETSP1325-20131115|11844_1   8 EYLPPEIVQRKPHTKRVDCWALGVVVFELLV-GHTPFVGDDAQNTLEIYhrITEGKIDFPGLVNELPKQVISMLCEVDDLVRPEISS 93 
                  689***************************9.99**999877776666522234456667666666666666666666666666665 PP

>> PF10018.4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.3   0.00017      0.23     110     179 ..      94     173 ..      87     184 .. 0.64

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00017
    PF10018.4 110 kapnewlpe.....altgdafrPw..PqEdeiRmGlLaqlqllaeegeerpgfdpeeeeerkaeeaee.....eeaeaktee 179
                  +ap  w +       l+++++ Pw  P E+e+  +lL  +++ +ee e  + +d+ee e  + +e++e     e  +  ++e
  MMETSP1325-20131115|11844_1  94 VAPHAWFKDvdtaaLLEKRLEAPWlpPVENEFDVSLLQESDDEEEEDE--DEGDVEEGESDEDSEEDEdsgegEVDAYDSDE 173
                  56777765566677789999*********************9999444..44444444444444443333444333333333 PP

>> PF08553.5  VID27 cytoplasmic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.0   0.00064      0.87     344     422 ..     100     178 ..      91     205 .. 0.51

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.00064
    PF08553.5 344 fqevftkalwetlnkekwakvkeeekdYildafea.leiedeeeeeeaeeeeeeeeeeeedeeege.skeevddeeyeeed 422
                  f++v t al e++ +  w    e+e d  l   ++ +e ed e+e + ee e++e+ +eede+ ge + + +d++e +e +
  MMETSP1325-20131115|11844_1 100 FKDVDTAALLEKRLEAPWLPPVENEFDVSLLQESDdEEEED-EDEGDVEEGESDED-SEEDEDSGEgEVDAYDSDEADELE 178
                  56666666666666666666656655543333222023333.23333333332222.222222222133444444434333 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  11.8    0.0022       3.1     334     385 ..     133     180 ..     102     235 .. 0.54

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0022
    PF04147.7 334 eeeeeeeeeegvededeeeddddeeeeeedvdedeeeedeedeesddeeeee 385
                  +++eeee+ e++ d +e e+d+d   +eed+d+ e e d  d+++ de e++
  MMETSP1325-20131115|11844_1 133 SDDEEEED-EDEGDVEEGESDED---SEEDEDSGEGEVDAYDSDEADELESN 180
                  11111111.11111111112222...22222222222222222222221111 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   7.1    0.0031       4.3     126     174 ..     134     184 ..     114     232 .. 0.51

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.0031
    PF02724.9 126 emkeeee..eesdedsdseddeeeeessasekrksesdedeeddddeeded 174
                  +++eee+  e + e+++s++d+ee+e s + + ++ ++++ ++ +++e ++
  MMETSP1325-20131115|11844_1 134 DDEEEEDedEGDVEEGESDEDSEEDEDSGEGEVDAYDSDEADELESNEYGE 184
                  111111112222222222222222222222222333333333333333344 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  11.6    0.0055       7.5     447     505 ..     131     188 ..     104     241 .] 0.41

  Alignments for each domain:
  == domain 1    score: 4.7 bits;  conditional E-value: 0.0055
   PF03344.10 447 keedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassegegddeeeeedee...k 505
                  +e+d+e++e+e+e + ee+e +e+ ee+e++ + e    ++a   +e d+ e +e  e    
  MMETSP1325-20131115|11844_1 131 QESDDEEEEDEDEGDVEEGESDEDSEEDEDSGEGE----VDAYDSDEADELESNEYGEifkP 188
                  44444444444444444444444444433333222....22222222222222222223331 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   8.0    0.0083        11     362     416 ..     122     176 ..     114     194 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0083
    PF03985.8 362 rakfdpiefeevdedeeeeeeqrseeeeeeeeedeeeeeseeeeeleskeksade 416
                  + +fd    +e d++eee+e++ ++ee e+ e++ee+e+s e e    ++++ade
  MMETSP1325-20131115|11844_1 122 ENEFDVSLLQESDDEEEEDEDEGDVEEGESDEDSEEDEDSGEGEVDAYDSDEADE 176
                  5677777777777777777776666555555555555555544444333333333 PP

>> PF03353.10  Ras-mediated vulval-induction antagonist
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   5.9    0.0097        13     121     200 ..     124     202 ..     122     209 .. 0.88

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0097
   PF03353.10 121 kfEaklrkekwtgekqedddeddiiydgifevdktrseqeaeeqdevdeveveEvkeeysanlaereeeesnlsrpeavk 200
                  +f   l +e ++ e++ed+de d+  ++  e  + ++++   e d+ d+ e++E + + ++++++   ++s++ r+++++
  MMETSP1325-20131115|11844_1 124 EFDVSLLQE-SDDEEEEDEDEGDVEEGESDEDSEEDEDSGEGEVDAYDSDEADELESNEYGEIFKPFRSSSSTVRTNSMQ 202
                  567778888.8889999**************889899999*************************999888887777654 PP

>> PF05327.6  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   5.9    0.0086        12     214     268 ..     125     186 ..     122     224 .. 0.58

  Alignments for each domain:
  == domain 1    score: 3.7 bits;  conditional E-value: 0.0086
    PF05327.6 214 lDvelqvelddlddeeeeellaeeeeeeeeelfdlddddseeesvesedeedee........a 268
                   Dv+l  e dd ++e+e+e + ee e+ +e+ ++++d  + e+++ ++de de          
  MMETSP1325-20131115|11844_1 125 FDVSLLQESDDEEEEDEDEGDVEEGES-DEDSEEDEDSGEGEVDAYDSDEADELesneygeiF 186
                  588777777777555554444433333.33333333333344444444444433344445550 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       540  (0.0394968); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                        26  (0.0019017); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.70u 0.41s 00:00:01.10 Elapsed: 00:00:00.55
# Mc/sec: 1050.04
//
Query:       MMETSP1325-20131115|11846_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-09   36.5   0.0    4.4e-09   35.8   0.0    1.3  1  PF00782.15 Dual specificity phosphatase, catalytic domain
    6.5e-06   26.3   0.1    1.9e-05   24.8   0.0    2.0  2  PF13350.1  Tyrosine phosphatase family
    1.3e-05   24.5   0.0    1.8e-05   24.0   0.0    1.2  1  PF00102.22 Protein-tyrosine phosphatase
  ------ inclusion threshold ------
        0.1   10.8   0.0       0.14   10.3   0.0    1.1  1  PF05094.7  Late expression factor 9 (LEF-9)


Domain annotation for each model (and alignments):
>> PF00782.15  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.0   1.3e-12   4.4e-09      43     117 ..     126     202 ..     107     211 .. 0.84

  Alignments for each domain:
  == domain 1    score: 35.8 bits;  conditional E-value: 1.3e-12
                  EE-----STT--CGGGHHHHHHHHHHH..CC----EEEE-----HHHHHHHHHHHHHHCT-.HHHHHHHHHHHHSTT- CS
   PF00782.15  43 lripvedetetkiskeleeavefieka..eqkgkkvlVHCqaGisRSatliiaYlmktknl.slneAyefvkerrski 117
                   +ip +d ++    ++++e+ e i++   ++ ++ v+VHC+aG  R++t+i+aYl +   + ++ eA++f+ ++r + 
  MMETSP1325-20131115|11846_1 126 AHIPFDD-HNPPKMPQFRECCEDIHAWleADPENVVAVHCKAGKGRTGTIIAAYLVYAGICkTTAEALQFFGKQRTSN 202
                  6889999.888889999*****9*9775555677899********************998868899*****8888654 PP

>> PF13350.1  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   5.6e-09   1.9e-05     117     155 ..     149     188 ..      83     191 .. 0.80
   2 ?   -2.7   0.0       1.6   5.5e+03      48      66 ..     232     250 ..     219     267 .. 0.51

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 5.6e-09
    PF13350.1 117 lealaeee.gpvlfHCtaGKDRTGvvaalllsllgvdeet 155
                   + l +++ + v +HC+aGK RTG ++a  l  +g+ ++t
  MMETSP1325-20131115|11846_1 149 HAWLEADPeNVVAVHCKAGKGRTGTIIAAYLVYAGICKTT 188
                  3334444447999*******************99987765 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 1.6
    PF13350.1  48 DLRseeEvekepdklpegv 66 
                  D+R ++ +++++d  ++++
  MMETSP1325-20131115|11846_1 232 DMRAAQLARRANDAAMAKL 250
                  3333333333333333333 PP

>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   5.4e-09   1.8e-05     143     220 ..     130     205 ..      92     217 .. 0.76

  Alignments for each domain:
  == domain 1    score: 24.0 bits;  conditional E-value: 5.4e-09
                  --TTSCGSGSHHHHHHHHHHHHHS.STTSS-EEEES------HHHHHHHHHHHHHHHHT--TBEHHHHHHHHHTTSTTS CS
   PF00102.22 143 Wpdhgvpespkslldlirkvrksk.taksgpvvVhCsaGvgRtgtfvaldilleqleaeeekvdvlqivkelRkqRpgm 220
                    dh+ p +  ++ +++++++ +  ++ ++ v VhC aG gRtgt++a+ ++   + ++    + lq+  + R++  + 
  MMETSP1325-20131115|11846_1 130 FDDHN-PPKMPQFRECCEDIHAWLeADPENVVAVHCKAGKGRTGTIIAAYLVYAGICKTT--AEALQFFGKQRTSNGKG 205
                  44666.557788899999999998777788999****************99998888833..46666666666655555 PP

>> PF05094.7  Late expression factor 9 (LEF-9)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   4.1e-05      0.14     177     230 ..     191     244 ..     173     253 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 4.1e-05
    PF05094.7 177 tasfyanvqclnGvneivppkasirryyGrdvenvrawttrhpnisqlstqvsd 230
                  +  f+ + +  nG  + +p ++   ry+G+ ++  ra + r    +ql+ +  d
  MMETSP1325-20131115|11846_1 191 ALQFFGKQRTSNGKGVTIPSQKRFVRYFGKALKAQRAQARRDMRAAQLARRAND 244
                  44699999999**********************************999987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       415  (0.030354); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.64
# Mc/sec: 1273.06
//
Query:       MMETSP1325-20131115|11850_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|11849_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-49  165.8   0.1    7.8e-49  165.4   0.1    1.2  1  PF00227.21 Proteasome subunit
    2.5e-12   45.7   0.0      4e-12   45.1   0.0    1.3  1  PF10584.4  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.4   0.1   1.1e-52   7.8e-49       1     190 []      29     215 ..      29     215 .. 0.94

  Alignments for each domain:
  == domain 1    score: 165.4 bits;  conditional E-value: 1.1e-52
                  HHC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHH..STTCSHHHHHHHHHHHHHHHHHHBT.THCTSEEEEEE CS
   PF00227.21   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktllekly..kedltleeavelavkalkealerdk.lsgknvevavi 190
                  vk+G++++G+++k +vvlaa kr++  + l ++ + +K+ kiddhi++++aGl aDar l++++r e+ ++++ yg+p++ +rlv+ +a++ q+ tq + rrp+gv++l++ vd +g p+ly+++psG+++e+  a+aiG ++++akt+lek +  +++ + + ++++ +kal+  ++ dk l  +n  vavi
  MMETSP1325-20131115|11849_1  29 VKQGSACLGLTSKTHVVLAALKRSP--HEL-ASFQ-KKLLKIDDHIAVGIAGLNADARSLAKYMRTECLNHKYVYGSPMQGSRLVTDVADKHQRCTQMYVRRPYGVGMLMGVVDGTG-PHLYETEPSGAFHEY-VAMAIGARAQSAKTYLEKFMaeFPEADSDAMIKHSLKALSGCVQTDKqLEASNTCVAVI 215
                  79***********************..999.5554.9*****************************************************************************666.***************.6***************************************9888666578888877776 PP

>> PF10584.4  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.0   5.8e-16     4e-12       1      23 []       6      28 ..       6      28 .. 0.98

  Alignments for each domain:
  == domain 1    score: 45.1 bits;  conditional E-value: 5.8e-16
                 T---TT--------HHHHHHHHH CS
    PF10584.4  1 YDrslTtFSPdGRLfQVEYAlkA 23
                 YD+++T++SP+GRL+QVEYA +A
  MMETSP1325-20131115|11849_1  6 YDTDVTVWSPQGRLLQVEYAGEA 28
                 ********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      359  (0.026258); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1266.65
//
Query:       MMETSP1325-20131115|11855_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|11859_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-14   51.9   0.0    7.3e-14   51.2   0.0    1.4  1  PF07973.9 Threonyl and Alanyl tRNA synthetase second additional domain


Domain annotation for each model (and alignments):
>> PF07973.9  Threonyl and Alanyl tRNA synthetase second additional domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0   5.3e-18   7.3e-14       2      44 .]      23      71 ..      22      71 .. 0.96

  Alignments for each domain:
  == domain 1    score: 51.2 bits;  conditional E-value: 5.3e-18
                 EEEEETTTEEEE------SB-------EEE.......EEEES----EEEE CS
    PF07973.9  2 rvvsiGdvsvelCgGtHvpnTgeIgafkil.......seesiakglrRIy 44
                 +v+++Gd  ++lC+G+Hvp Tg+++af++l        ++  ++ l+RIy
  MMETSP1325-20131115|11859_1 23 TVYRCGD-LIDLCRGPHVPDTGKVKAFAVLrnsatnwLGKVENDSLQRIY 71
                 8*****9.**********************9999999999999******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       225  (0.016457); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 376.57
//
Query:       MMETSP1325-20131115|11871_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.33   11.0  10.7       0.35   10.9   7.4    1.1  1  PF12067.3 Sox C-terminal transactivation domain
        2.5    7.5   7.0        2.9    7.4   4.9    1.0  1  PF06908.6 Protein of unknown function (DUF1273)


Domain annotation for each model (and alignments):
>> PF12067.3  Sox C-terminal transactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   7.4   5.1e-05      0.35      51     101 ..      13      61 ..       4      64 .] 0.82

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 5.1e-05
    PF12067.3  51 lpaysynseyapeeasasallrelavseaqqqespasllgcpaspalYygq 101
                  +  ++y+++ ap+ a++++++++++++++q q++++  +   +  +lY+++
  MMETSP1325-20131115|11871_1  13 EQGQQYQQNVAPQAAQQQVIVQQHPHQQHQLQQHQQ--HFLTHQQQLYHQA 61 
                  34578*****************************99..6777788888654 PP

>> PF06908.6  Protein of unknown function (DUF1273)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.9   0.00042       2.9      88     134 ..      12      58 ..       5      60 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00042
    PF06908.6  88 neanqekyaklleqaDfvesvskkpyespaqlrkknqFllehtdall 134
                  +e+ q+  +++  qa + + + ++  ++++ql++++q +l+h ++l+
  MMETSP1325-20131115|11871_1  12 QEQGQQYQQNVAPQAAQQQVIVQQHPHQQHQLQQHQQHFLTHQQQLY 58 
                  6888888899999***********99****************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2219  (0.162303); expected 273.4 (0.02)
Passed bias filter:                      968  (0.0708016); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.49s 00:00:00.95 Elapsed: 00:00:00.54
# Mc/sec: 284.01
//
Query:       MMETSP1325-20131115|11865_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-35  117.1  19.7    1.1e-09   36.7   0.8    4.1  4  PF00036.27 EF hand
    1.4e-29  101.8  12.1      9e-17   60.8   0.5    2.2  2  PF13499.1  EF-hand domain pair
      4e-28   94.5  11.7    8.6e-10   37.5   0.1    4.3  4  PF13405.1  EF-hand domain
    1.2e-26   91.9  12.9    6.5e-13   47.9   1.1    3.8  4  PF13833.1  EF-hand domain pair
    8.4e-23   78.5  19.5    8.8e-07   27.8   0.1    4.5  4  PF13202.1  EF hand
    1.8e-06   27.5   8.4       0.16   11.5   0.7    3.3  3  PF12763.2  Cytoskeletal-regulatory complex EF hand
    4.6e-05   23.3   1.6      0.068   13.0   0.0    2.1  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
     0.0064   16.2   1.1         33    4.5   0.0    4.7  5  PF09373.5  Pseudomurein-binding repeat
  ------ inclusion threshold ------
      0.013   13.7   0.2       0.43    8.7   0.0    2.0  2  PF05872.7  Bacterial protein of unknown function (DUF853)
      0.031   13.4   0.9       0.39    9.8   0.2    2.1  2  PF01595.15 Domain of unknown function DUF21
      0.044   13.2   0.2        1.2    8.5   0.0    2.1  2  PF04876.7  Tenuivirus major non-capsid protein
      0.064   12.7   0.1         12    5.4   0.0    3.1  3  PF03672.8  Uncharacterised protein family (UPF0154)
        0.1   12.2   2.1       0.77    9.4   0.5    2.3  2  PF05974.7  Domain of unknown function (DUF892)
       0.12   12.3   2.4       0.89    9.5   0.5    2.4  2  PF03963.9  Flagellar hook capping protein - N-terminal region
       0.26   11.4   4.3        6.7    6.9   0.2    2.4  2  PF13155.1  Toprim-like
       0.27   11.1   3.6        2.8    7.8   0.1    2.5  3  PF09524.5  Conserved phage C-terminus (Phg_2220_C)
        0.4   10.8   3.1         69    3.7   0.0    3.3  4  PF14297.1  Domain of unknown function (DUF4373)
       0.43   10.8   4.9        0.2   11.9   0.8    2.3  3  PF03448.12 MgtE intracellular N domain
       0.77    9.8   0.1       0.77    9.8   0.1    3.0  4  PF11450.3  Protein of unknwon function (DUF3008)
        2.7    7.7   7.2         18    5.0   2.8    2.6  2  PF11527.3  The ARF-like 2 binding protein BART


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.1   2.6e-12   1.8e-09       1      29 []      29      57 ..      29      57 .. 0.95
   2 !   36.7   0.8   1.6e-12   1.1e-09       1      28 [.      65      92 ..      65      93 .. 0.96
   3 !   20.7   0.1   2.2e-07   0.00015       1      28 [.     102     129 ..     102     130 .. 0.91
   4 !   35.3   1.3   4.5e-12   3.1e-09       1      28 [.     138     165 ..     138     166 .. 0.96

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 2.6e-12
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHHH CS
   PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkkl 29
                 e++eaF++fD+Dg+G+I+ +E+k a+++l
  MMETSP1325-20131115|11865_1 29 EIREAFDLFDTDGSGTIDAKELKVAMRAL 57
                 79************************975 PP

  == domain 2    score: 36.7 bits;  conditional E-value: 1.6e-12
                 HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealkk 28
                 e+k++++ +DkDg+G+I+f+Ef+e++++
  MMETSP1325-20131115|11865_1 65 EIKKMISDIDKDGSGTIDFSEFLEMMTA 92
                 89************************86 PP

  == domain 3    score: 20.7 bits;  conditional E-value: 2.2e-07
                  HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkk 28 
                  e+ +aF++fD D +GkIsf  +k++ k+
  MMETSP1325-20131115|11865_1 102 EILKAFRLFDDDETGKISFRNLKRVAKE 129
                  7899*****************9999876 PP

  == domain 4    score: 35.3 bits;  conditional E-value: 4.5e-12
                  HHHHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealkk 28 
                  el+e+++e+D+DgdG I+ +Ef++++kk
  MMETSP1325-20131115|11865_1 138 ELQEMIDEADRDGDGEINEDEFLRIMKK 165
                  79************************98 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.5   1.3e-19     9e-17       2      66 .]      30      90 ..      29      90 .. 0.94
   2 !   45.7   3.3   7.1e-15   4.9e-12       2      66 .]     103     163 ..      95     163 .. 0.94

  Alignments for each domain:
  == domain 1    score: 60.8 bits;  conditional E-value: 1.3e-19
    PF13499.1  2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66
                 ++eaF+l+D+dg+g++d  eL+ ++++lg e + ee++++    + ++Dk+g+G+++f+Efl+++
  MMETSP1325-20131115|11865_1 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM----ISDIDKDGSGTIDFSEFLEMM 90
                 899**************************88888888888....*******************98 PP

  == domain 2    score: 45.7 bits;  conditional E-value: 7.1e-15
    PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqai 66 
                  + +aF+l+D d +g+++   L+r++k lg++++dee++e+    ++e+D +gdG ++ +Efl ++
  MMETSP1325-20131115|11865_1 103 ILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEM----IDEADRDGDGEINEDEFLRIM 163
                  5579*************************99999999999....******************987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.1   1.3e-12   8.6e-10       1      31 []      29      58 ..      29      58 .. 0.96
   2 !   19.6   0.1   7.3e-07    0.0005       7      27 ..      71      91 ..      65      96 .. 0.84
   3 !   22.8   0.2   6.9e-08   4.7e-05       1      31 []     102     131 ..     102     131 .. 0.91
   4 !   20.4   0.2   3.9e-07   0.00027       2      28 ..     139     165 ..     138     168 .. 0.85

  Alignments for each domain:
  == domain 1    score: 37.5 bits;  conditional E-value: 1.3e-12
                 HHH---GCC-------B---HHHHHHH.H-- CS
    PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrkslg 31
                 e+reaF+lfD+dg+G+ida+EL+ a+r +lg
  MMETSP1325-20131115|11865_1 29 EIREAFDLFDTDGSGTIDAKELKVAMR-ALG 58
                 79*************************.887 PP

  == domain 2    score: 19.6 bits;  conditional E-value: 7.3e-07
                 GCC-------B---HHHHHHH CS
    PF13405.1  7 klfDkdgdGkidaeELrdaLr 27
                   +Dkdg+G+id++E++ +++
  MMETSP1325-20131115|11865_1 71 SDIDKDGSGTIDFSEFLEMMT 91
                 569***************998 PP

  == domain 3    score: 22.8 bits;  conditional E-value: 6.9e-08
                  HHH---GCC-------B---HHHHHHH.H-- CS
    PF13405.1   1 elreaFklfDkdgdGkidaeELrdaLrkslg 31 
                  e+ +aF+lfD+d +Gki++  L+++ +  lg
  MMETSP1325-20131115|11865_1 102 EILKAFRLFDDDETGKISFRNLKRVAK-ELG 131
                  6789********************998.665 PP

  == domain 4    score: 20.4 bits;  conditional E-value: 3.9e-07
                  HH---GCC-------B---HHHHHHH. CS
    PF13405.1   2 lreaFklfDkdgdGkidaeELrdaLrk 28 
                  l+e  +  D+dgdG+i+ +E++++++k
  MMETSP1325-20131115|11865_1 139 LQEMIDEADRDGDGEINEDEFLRIMKK 165
                  66667788*****************96 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.1   4.9e-08   3.3e-05      24      52 ..      27      55 ..      23      56 .. 0.95
   2 !   40.5   0.4   1.9e-13   1.3e-10       3      52 ..      43      91 ..      42      93 .. 0.96
   3 !    8.3   0.1    0.0023       1.6      31      44 ..     107     120 ..      99     121 .. 0.89
   4 !   47.9   1.1   9.5e-16   6.5e-13       1      52 [.     114     164 ..     114     166 .. 0.94

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 4.9e-08
    PF13833.1 24 eeevdilfrefDtdgdGkisfeEFcvlle 52
                 ++e+++ f++fDtdg+G i+ +E +v+++
  MMETSP1325-20131115|11865_1 27 KQEIREAFDLFDTDGSGTIDAKELKVAMR 55
                 79************************996 PP

  == domain 2    score: 40.5 bits;  conditional E-value: 1.9e-13
    PF13833.1  3 GlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvlle 52
                 G I+++eLk a+++lg + +++ee+  +++ +D dg+G i+f EF+++++
  MMETSP1325-20131115|11865_1 43 GTIDAKELKVAMRALGFE-PKKEEIKKMISDIDKDGSGTIDFSEFLEMMT 91
                 89**********999***.*****************************97 PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.0023
    PF13833.1  31 frefDtdgdGkisf 44 
                  fr+fD d  Gkisf
  MMETSP1325-20131115|11865_1 107 FRLFDDDETGKISF 120
                  9************8 PP

  == domain 4    score: 47.9 bits;  conditional E-value: 9.5e-16
    PF13833.1   1 ekGlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvlle 52 
                  e+G+I++ +Lkr ++ lg + +++ee++++++e+D+dgdG i+++EF++ ++
  MMETSP1325-20131115|11865_1 114 ETGKISFRNLKRVAKELGEN-MTDEELQEMIDEADRDGDGEINEDEFLRIMK 164
                  69**********88989999.***************************9887 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.1   1.3e-09   8.8e-07       1      22 [.      30      51 ..      30      54 .. 0.90
   2 !   23.1   0.4   4.2e-08   2.8e-05       1      25 []      66      90 ..      66      90 .. 0.89
   3 !   21.1   0.3   1.7e-07   0.00012       1      24 [.     104     126 ..     104     127 .. 0.91
   4 !   17.7   1.1   2.1e-06    0.0014       1      24 [.     139     162 ..     137     164 .. 0.87

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 1.3e-09
                 HHHHHHHH--S----B-HHHHH CS
    PF13202.1  1 lkdtFrafDlNgDGkIsreELk 22
                 ++++F+ fD++g+G+I+++ELk
  MMETSP1325-20131115|11865_1 30 IREAFDLFDTDGSGTIDAKELK 51
                 6778*****************8 PP

  == domain 2    score: 23.1 bits;  conditional E-value: 4.2e-08
                 HHHHHHHH--S----B-HHHHHHHH CS
    PF13202.1  1 lkdtFrafDlNgDGkIsreELkrlv 25
                 +k++ + +D++g+G+I+++E+ +++
  MMETSP1325-20131115|11865_1 66 IKKMISDIDKDGSGTIDFSEFLEMM 90
                 6788899**************8865 PP

  == domain 3    score: 21.1 bits;  conditional E-value: 1.7e-07
                  HHHHHHHH--S----B-HHHHHHH CS
    PF13202.1   1 lkdtFrafDlNgDGkIsreELkrl 24 
                  lk+ Fr fD +  GkIs+  Lkr+
  MMETSP1325-20131115|11865_1 104 LKA-FRLFDDDETGKISFRNLKRV 126
                  567.******************98 PP

  == domain 4    score: 17.7 bits;  conditional E-value: 2.1e-06
                  HHHHHHHH--S----B-HHHHHHH CS
    PF13202.1   1 lkdtFrafDlNgDGkIsreELkrl 24 
                  l+++ +++D +gDG I+ +E+ r+
  MMETSP1325-20131115|11865_1 139 LQEMIDEADRDGDGEINEDEFLRI 162
                  5677899**************885 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00038      0.26      39      71 ..      24      56 ..       5      68 .. 0.80
   2 !    8.8   0.3    0.0017       1.2      50      69 ..      69      90 ..      59      98 .. 0.76
   3 !   11.5   0.7   0.00024      0.16      10      70 ..     104     164 ..      94     167 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00038
    PF12763.2 39 kleedklekiwdladidedgkldfeefciamrl 71
                 + +++++ + +dl d d  g++d +e+ +amr 
  MMETSP1325-20131115|11865_1 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRA 56
                 34566778889********************95 PP

  == domain 2    score: 8.8 bits;  conditional E-value: 0.0017
    PF12763.2 50 dladidedg..kldfeefciam 69
                  ++did+dg  ++df ef  +m
  MMETSP1325-20131115|11865_1 69 MISDIDKDGsgTIDFSEFLEMM 90
                 368999996337******8777 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 0.00024
    PF12763.2  10 kkyweifsglkpednkltgdkvapvlkn..skleedklekiwdladidedgkldfeefciamr 70 
                   k + +f+    e  k++  ++  v k+   ++++++l+++ d ad d dg+++ +ef  +m+
  MMETSP1325-20131115|11865_1 104 LKAFRLFDDD--ETGKISFRNLKRVAKElgENMTDEELQEMIDEADRDGDGEINEDEFLRIMK 164
                  5555555443..33444444444444432257999***********************99997 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0    0.0001     0.068      37     111 ..      11      87 ..       1      89 [. 0.82
   2 !   10.0   0.3   0.00091      0.62      48     111 ..      95     160 ..      87     162 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.0001
    PF10591.4  37 seelekeaekknskeckeaveWkFnqlDtnkdkvlsksElaplrapl..vklehCikeffksCDadkdkkisleEWc 111
                  s+  +k+++ + ++e k++++  F+ +Dt+  + ++ +El+   + l   + ++ ik++++  D d  ++i+++E+ 
  MMETSP1325-20131115|11865_1  11 SRGAQKNKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALgfEPKKEEIKKMISDIDKDGSGTIDFSEFL 87 
                  44556666667788999************************988888766778889999999999999*******97 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00091
    PF10591.4  48 nskeckeaveWkFnqlDtnkdkvlsksElaplrapl..vklehCikeffksCDadkdkkisleEWc 111
                  + k  +e++   F  +D ++ +++s + l+ + ++l     ++  +e+++++D d d++i+ +E+ 
  MMETSP1325-20131115|11865_1  95 SEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELgeNMTDEELQEMIDEADRDGDGEINEDEFL 160
                  556677788889999********************97644566799******************96 PP

>> PF09373.5  Pseudomurein-binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.57   3.9e+02       7      17 ..      63      73 ..      62      75 .. 0.90
   2 ?    3.7   0.0     0.088        60       1      13 [.      77      89 ..      77      90 .. 0.93
   3 ?    0.1   0.0       1.2   8.2e+02       6      15 ..      99     108 ..      99     109 .. 0.90
   4 ?    4.5   0.0     0.048        33       2      21 ..     115     134 ..     114     137 .. 0.86
   5 ?   -0.2   0.0       1.5   9.9e+02       2      17 ..     151     166 ..     150     169 .] 0.80

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.57
    PF09373.5  7 yeeyldmasrv 17
                 +ee+++m+s++
  MMETSP1325-20131115|11865_1 63 KEEIKKMISDI 73
                 79******997 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.088
    PF09373.5  1 gsgkisyeeyldm 13
                 gsg+i ++e+l+m
  MMETSP1325-20131115|11865_1 77 GSGTIDFSEFLEM 89
                 69*********99 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 1.2
    PF09373.5   6 syeeyldmas 15 
                  s+ee+l++++
  MMETSP1325-20131115|11865_1  99 SREEILKAFR 108
                  89*****996 PP

  == domain 4    score: 4.5 bits;  conditional E-value: 0.048
    PF09373.5   2 sgkisyeeyldmasrvlafi 21 
                  +gkis+++++++a++   ++
  MMETSP1325-20131115|11865_1 115 TGKISFRNLKRVAKELGENM 134
                  69***********9977666 PP

  == domain 5    score: -0.2 bits;  conditional E-value: 1.5
    PF09373.5   2 sgkisyeeyldmasrv 17 
                  +g i  +e+l++ ++ 
  MMETSP1325-20131115|11865_1 151 DGEINEDEFLRIMKKT 166
                  689999****998775 PP

>> PF05872.7  Bacterial protein of unknown function (DUF853)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00063      0.43     122     180 ..      20      80 ..      16      84 .. 0.80
   2 ?    3.5   0.0     0.024        17     111     167 ..      84     138 ..      78     147 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00063
    PF05872.7 122 lelndvqegvLnivfriaDeeGllLlDlkDLrallkevadnak..elskqygnvskasvga 180
                  +el++ q+  +  +f + D +G   +D k+L+  ++ ++ ++k  e++k  + + k   g+
  MMETSP1325-20131115|11865_1  20 FELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKkeEIKKMISDIDKDGSGT 80 
                  799**********************************976554115566666666666665 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.024
    PF05872.7 111 selGPllLarllelndvqegvLnivfriaDeeGllLlDlkDLrallkevadnakels 167
                  se+  ++ a++ e +d++e +L+ +fr+ D++    + +++L+ + ke+++n  + +
  MMETSP1325-20131115|11865_1  84 SEFLEMMTAKMSE-KDSREEILK-AFRLFDDDETGKISFRNLKRVAKELGENMTDEE 138
                  6677777777655.788999997.7************************99976554 PP

>> PF01595.15  Domain of unknown function DUF21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.16   1.1e+02     145     177 ..      51      77 ..      48      83 .. 0.83
   2 ?    9.8   0.2   0.00056      0.39     153     182 ..     126     157 ..     116     158 .. 0.73

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.16
   PF01595.15 145 nlllrllgvkpeeepavteeelralveeseeeg 177
                  ++ +r lg +p       +ee++++++   ++g
  MMETSP1325-20131115|11865_1  51 KVAMRALGFEP------KKEEIKKMISDIDKDG 77 
                  56788889998......99*******9888777 PP

  == domain 2    score: 9.8 bits;  conditional E-value: 0.00056
   PF01595.15 153 vkpeeepavteeelralveeseeeg..vleee 182
                  v +e ++++t eel+++++e+ ++g  +++e+
  MMETSP1325-20131115|11865_1 126 VAKELGENMTDEELQEMIDEADRDGdgEINED 157
                  333678899*************9884456565 PP

>> PF04876.7  Tenuivirus major non-capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0    0.0017       1.2      85     114 ..      66      95 ..      59     105 .. 0.89
   2 ?    2.0   0.0      0.17   1.2e+02      72     111 ..     125     165 ..     110     167 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0017
    PF04876.7  85 leellgaedetenslidlgkflkllqdklG 114
                  ++++++ +d++ +++id+++fl+++  k+ 
  MMETSP1325-20131115|11865_1  66 IKKMISDIDKDGSGTIDFSEFLEMMTAKMS 95 
                  5789*********************99875 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.17
    PF04876.7  72 kvhkklPefs.ksfleellgaedetenslidlgkflkllqd 111
                  +v k+l e + +  l+e++   d + ++ i+  +fl+++++
  MMETSP1325-20131115|11865_1 125 RVAKELGENMtDEELQEMIDEADRDGDGEINEDEFLRIMKK 165
                  56667766441567999999999999999999999999975 PP

>> PF03672.8  Uncharacterised protein family (UPF0154)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.018        12      33      62 ..      46      75 ..      44      77 .. 0.89
   2 ?    2.8   0.0      0.12        82      37      55 ..      87     105 ..      84     112 .. 0.81
   3 ?    0.2   0.0      0.79   5.4e+02      36      59 ..     122     145 ..     118     149 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.018
    PF03672.8 33 nedairlmlaqmGrkpSekqinqilkaikk 62
                   + +++ +  +G +p ++ i++++  i k
  MMETSP1325-20131115|11865_1 46 DAKELKVAMRALGFEPKKEEIKKMISDIDK 75
                 56789*******************999876 PP

  == domain 2    score: 2.8 bits;  conditional E-value: 0.12
    PF03672.8  37 irlmlaqmGrkpSekqinq 55 
                  + +m a+m  k S + i +
  MMETSP1325-20131115|11865_1  87 LEMMTAKMSEKDSREEILK 105
                  789********99988755 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 0.79
    PF03672.8  36 airlmlaqmGrkpSekqinqilka 59 
                   ++ + +++G +  ++ +++++ +
  MMETSP1325-20131115|11865_1 122 NLKRVAKELGENMTDEELQEMIDE 145
                  567788899999999999999876 PP

>> PF05974.7  Domain of unknown function (DUF892)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1      0.12        85      45      72 ..      21      47 ..      16      71 .. 0.70
   2 ?    9.4   0.5    0.0011      0.77      51     141 ..      63     148 ..      48     156 .. 0.72

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.12
    PF05974.7 45 eetegqierLeqilerlgaspsgkkcka 72
                 e te+q++++++ ++  +++ sg   +a
  MMETSP1325-20131115|11865_1 21 ELTEEQKQEIREAFDLFDTDGSGTI-DA 47
                 6799***********9999999887.44 PP

  == domain 2    score: 9.4 bits;  conditional E-value: 0.0011
    PF05974.7  51 ierLeqilerlgaspsgkkckamegliaegqelleeaaedeevkdaaliaaaqavehyeIAaYgtlialAeqlgekeaaklLeqtldeeka 141
                  +e+++++++ ++++ sg      +++++ + + + e+ + ee++ a+        e  +  +++ l+++A++lge+ + + L+++ de+ +
  MMETSP1325-20131115|11865_1  63 KEEIKKMISDIDKDGSGTI--DFSEFLEMMTAKMSEKDSREEILKAF--RLFDDDETGK-ISFRNLKRVAKELGENMTDEELQEMIDEADR 148
                  5667777777777777777..45556666666555556666666666..2333333334.479************************9864 PP

>> PF03963.9  Flagellar hook capping protein - N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.5    0.0013      0.89      23      49 ..      68      98 ..       3      98 .. 0.78
   2 ?    2.2   0.0      0.25   1.7e+02      23      41 ..     138     163 ..     119     166 .. 0.69

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0013
    PF03963.9 23 a....ssakssssldkddFLkLLvaqLqnQD 49
                 +     +++ s ++d ++FL++++a ++  D
  MMETSP1325-20131115|11865_1 68 KmisdIDKDGSGTIDFSEFLEMMTAKMSEKD 98
                 0444467888999**************9766 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.25
    PF03963.9  23 a.......ssakssssldkddFLkLL 41 
                  +       ++++   ++++d+FL+++
  MMETSP1325-20131115|11865_1 138 ElqemideADRDGDGEINEDEFLRIM 163
                  133445447788888999******98 PP

>> PF13155.1  Toprim-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2    0.0099       6.7      30      87 ..      13      71 ..       1      87 [. 0.62
   2 ?    6.1   0.3     0.018        12      49      78 ..     106     135 ..      87     158 .. 0.67

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0099
    PF13155.1 30 gtkltkalakyleekre.keivlalDnDeaGrkaaeklkkalkekgkenekvkvvrlpe 87
                 g +++k+ +   e+k+e  e    +D D  G   a++lk a+++ g+e +k +++++++
  MMETSP1325-20131115|11865_1 13 GAQKNKKFELTEEQKQEiREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIS 71
                 4433333333333333355688899**************99999995555555544443 PP

  == domain 2    score: 6.1 bits;  conditional E-value: 0.018
    PF13155.1  49 ivlalDnDeaGrkaaeklkkalkekgkene 78 
                      +D De G+  +++lk+  ke g++ +
  MMETSP1325-20131115|11865_1 106 AFRLFDDDETGKISFRNLKRVAKELGENMT 135
                  55679*************988777762222 PP

>> PF09524.5  Conserved phage C-terminus (Phg_2220_C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       5.9     4e+03       9      24 ..      16      30 ..      14      34 .. 0.60
   2 ?    7.8   0.1    0.0042       2.8      13      65 ..      59     111 ..      56     118 .. 0.92
   3 ?    4.0   0.0     0.065        44      20      60 ..     122     162 ..     112     164 .. 0.84

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 5.9
    PF09524.5  9 agksfkakskktkklI 24
                  +k+f+  ++++k+ I
  MMETSP1325-20131115|11865_1 16 KNKKFEL-TEEQKQEI 30
                 5788984.44455545 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.0042
    PF09524.5  13 fkakskktkklIkaRlkegysledfkkVidlkvkeWlgdekmekYLrPetLFg 65 
                  f++k+++ kk+I+   k+g    df +  ++++++ +++++ e+ L+   LF 
  MMETSP1325-20131115|11865_1  59 FEPKKEEIKKMISDIDKDGSGTIDFSEFLEMMTAKMSEKDSREEILKAFRLFD 111
                  88899999*********************************999999999986 PP

  == domain 3    score: 4.0 bits;  conditional E-value: 0.065
    PF09524.5  20 tkklIkaRlkegysledfkkVidlkvkeWlgdekmekYLrP 60 
                  + k + + l e+ + e+++++id   ++  g+ + +++Lr 
  MMETSP1325-20131115|11865_1 122 NLKRVAKELGENMTDEELQEMIDEADRDGDGEINEDEFLRI 162
                  56677788999************999998888888888885 PP

>> PF14297.1  Domain of unknown function (DUF4373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1      0.27   1.8e+02      54      85 ..      18      49 ..      14      51 .. 0.82
   2 ?    3.6   0.0      0.11        74      43      71 ..      44      74 ..      38      88 .. 0.82
   3 ?    3.7   0.0       0.1        69      32      79 ..      69     116 ..      67     122 .. 0.77
   4 ?    3.7   0.0       0.1        70      43      72 ..     117     148 ..     112     164 .. 0.76

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.27
    PF14297.1 54 rklgvdeeevkkiieelglfeideqgiltSee 85
                 +k + +ee+ ++i e ++lf++d  g + ++e
  MMETSP1325-20131115|11865_1 18 KKFELTEEQKQEIREAFDLFDTDGSGTIDAKE 49
                 566889999999999*******9988777766 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.11
    PF14297.1 43 yvsldelkilarklgvde..eevkkiieelg 71
                 +++ +elk+  r lg++   ee+kk+i++++
  MMETSP1325-20131115|11865_1 44 TIDAKELKVAMRALGFEPkkEEIKKMISDID 74
                 678899999*****9986669******9764 PP

  == domain 3    score: 3.7 bits;  conditional E-value: 0.1
    PF14297.1  32 lleklykeegyyvsldelkilarklgvdeeevkkiieelglfeideqg 79 
                  +++ + k +  +++++e+ ++      +++  ++i++ + lf+ de+g
  MMETSP1325-20131115|11865_1  69 MISDIDKDGSGTIDFSEFLEMMTAKMSEKDSREEILKAFRLFDDDETG 116
                  677788888889999995555554467788999*********999865 PP

  == domain 4    score: 3.7 bits;  conditional E-value: 0.1
    PF14297.1  43 yvsldelkilarkl..gvdeeevkkiieelgl 72 
                  ++s++ lk +a++l  +++ ee++++i+e ++
  MMETSP1325-20131115|11865_1 117 KISFRNLKRVAKELgeNMTDEELQEMIDEADR 148
                  67888899999999666999*******97654 PP

>> PF03448.12  MgtE intracellular N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       3.2   2.2e+03      85      95 ..      22      32 ..      20      40 .. 0.52
   2 ?   -1.9   0.0       5.7   3.9e+03      52      64 ..      64      76 ..      58      93 .. 0.65
   3 ?   11.9   0.8   0.00029       0.2       7      64 ..      92     149 ..      81     157 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 3.2
                 S-CCCHHHHHC CS
   PF03448.12 85 ldeeereeiee 95
                 l ee+++ei+e
  MMETSP1325-20131115|11865_1 22 LTEEQKQEIRE 32
                 33444444443 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 5.7
                 HHHHHHHCTS-HH CS
   PF03448.12 52 eelaelleeldsD 64
                 ee++++++++d D
  MMETSP1325-20131115|11865_1 64 EEIKKMISDIDKD 76
                 4555555555554 PP

  == domain 3    score: 11.9 bits;  conditional E-value: 0.00029
                  HHTCCCS-HHHHHHHHHHS-HHHHHHHHCTS-CCCCCHCCCCS-HHHHHHHHCTS-HH CS
   PF03448.12   7 aelleeldeeeraallrllpkeeaaevleelsedlqeeliealpdeelaelleeldsD 64 
                  a++ e+ + ee ++ +rl +++e +++       +++el e+++deel e+++e d D
  MMETSP1325-20131115|11865_1  92 AKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRD 149
                  4555566789999*************988888899******************98877 PP

>> PF11450.3  Protein of unknwon function (DUF3008)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       5.5   3.7e+03      16      25 ..      10      19 ..       7      28 .. 0.68
   2 ?   -0.6   0.1       1.9   1.3e+03      19      46 ..      43      70 ..      42      76 .. 0.74
   3 ?   -1.5   0.4       3.8   2.6e+03      33      41 ..      90      98 ..      83     101 .. 0.79
   4 ?    9.8   0.1    0.0011      0.77      19      45 ..     116     142 ..     114     151 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 5.5
    PF11450.3 16 AkrGetkksd 25
                 A rG +k+++
  MMETSP1325-20131115|11865_1 10 ASRGAQKNKK 19
                 6788777664 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 1.9
    PF11450.3 19 GetkksdLkgasksmaeSMsekeLeelA 46
                 G  ++++Lk a + +    +++e++++ 
  MMETSP1325-20131115|11865_1 43 GTIDAKELKVAMRALGFEPKKEEIKKMI 70
                 5667788888888887777888888885 PP

  == domain 3    score: -1.5 bits;  conditional E-value: 3.8
    PF11450.3 33 maeSMseke 41
                 m   Msek+
  MMETSP1325-20131115|11865_1 90 MTAKMSEKD 98
                 788899998 PP

  == domain 4    score: 9.8 bits;  conditional E-value: 0.0011
    PF11450.3  19 GetkksdLkgasksmaeSMsekeLeel 45 
                  G+ +  +Lk+ +k++ e M+++eL+e+
  MMETSP1325-20131115|11865_1 116 GKISFRNLKRVAKELGENMTDEELQEM 142
                  7778889*******************9 PP

>> PF11527.3  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   2.8     0.026        18      32     119 ..      16      99 ..      13     101 .. 0.74
   2 ?    2.9   0.0      0.12        79      34      68 ..     108     142 ..     100     166 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.026
                  HHHTT--SS-SSTTHHHHHHHHHHHHHHHHHHHHH-------THHHHH...SS-GGG----HHHHHHGGG-HHHHHHHHHHHHHHH-- CS
    PF11527.3  32 kcivFddeeenkleyteihkeYkelvekllesfleelgispeqfeeaclsesksknqaakkifqqllaaeDfeiFkkmMvqrnkelel 119
                  k   F+ +ee+k+e +e ++ + +    +++ +  el++ ++++ ++   ++++ +++  +i +    + Df++F +mM+++  e++ 
  MMETSP1325-20131115|11865_1  16 KNKKFELTEEQKQEIREAFDLFDTDGSGTIDAK--ELKVAMRALGFEP--KKEEIKKMISDIDKDGSGTIDFSEFLEMMTAKMSEKDS 99 
                  556788888899999999988888777777754..6677777777777..55555666666666667788***********9998875 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.12
                  HTT--SS-SSTTHHHHHHHHHHHHHHHHHHHHH-- CS
    PF11527.3  34 ivFddeeenkleyteihkeYkelvekllesfleel 68 
                   +Fdd+e+ k++++++    kel e++ ++ l+e+
  MMETSP1325-20131115|11865_1 108 RLFDDDETGKISFRNLKRVAKELGENMTDEELQEM 142
                  68************999999999999999999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       868  (0.0634874); expected 273.4 (0.02)
Passed bias filter:                      573  (0.0419105); expected 273.4 (0.02)
Passed Vit filter:                        79  (0.00577823); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.62u 0.39s 00:00:01.01 Elapsed: 00:00:00.54
# Mc/sec: 749.97
//
Query:       MMETSP1325-20131115|11872_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   12.4   0.1      0.044   12.1   0.1    1.1  1  PF05943.7 Protein of unknown function (DUF877)
       0.19   11.0   0.9       0.29   10.4   0.1    1.8  2  PF08281.7 Sigma-70, region 4


Domain annotation for each model (and alignments):
>> PF05943.7  Protein of unknown function (DUF877)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   6.5e-06     0.044       7      41 ..      49      83 ..      46      87 .] 0.91

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.5e-06
    PF05943.7  7 eidkklseqlneilhhpefqklEasWrgLkllvke 41
                 +++++lse ++++++  +   lEa+W gLk l k+
  MMETSP1325-20131115|11872_1 49 QLEAELSEDVRQVMAMRSEDGLEAAWCGLKELQKK 83
                 7899**************************99776 PP

>> PF08281.7  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.82   5.6e+03      28      34 ..       5      11 ..       4      14 .. 0.58
   2 ?   10.4   0.1   4.3e-05      0.29       9      28 ..      52      71 ..      48      73 .. 0.91

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 0.82
    PF08281.7 28 sykEIAe 34
                 s +EI e
  MMETSP1325-20131115|11872_1  5 SLEEIEE 11
                 6666655 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 4.3e-05
    PF08281.7  9 aeLperqreifllrylegls 28
                 aeL+e+ r+++ +r ++gl 
  MMETSP1325-20131115|11872_1 52 AELSEDVRQVMAMRSEDGLE 71
                 79****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|11875_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|11876_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.2   11.8  11.5       0.45   10.7   8.0    1.6  1  PF12440.3 Melanoma associated antigen family N terminal
        4.3    6.6  11.9        6.8    5.9   8.3    1.4  1  PF10500.4 Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> PF12440.3  Melanoma associated antigen family N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   8.0   6.6e-05      0.45      35      79 ..      13      50 ..       3      60 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 6.6e-05
    PF12440.3 35 estsssspliegtpesvpaagspsppqspqgasststaaaavsgs 79
                 + +ssss+       s+++++spsp +++++a+s++ta+  +++s
  MMETSP1325-20131115|11876_1 13 AGASSSSA-------SSSSSSSPSPRKARRRACSSPTAVRRIPSS 50
                 34455444.......8999999*****************998876 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   8.3   0.00099       6.8      61      87 ..      14      35 ..       5      57 .. 0.57

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00099
    PF10500.4 61 ssssssssssssssssssskseekrkk 87
                   ssss+sssssss+s      +k+++
  MMETSP1325-20131115|11876_1 14 GASSSSASSSSSSSPSP-----RKARR 35
                 33333333333333332.....33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       567  (0.0414716); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 594.10
//
Query:       MMETSP1325-20131115|11877_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       343  (0.0250878); expected 273.4 (0.02)
Passed bias filter:                      270  (0.0197484); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 496.39
//
Query:       MMETSP1325-20131115|11885_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.97    8.5  10.2        1.2    8.2   7.1    1.0  1  PF07174.6 Fibronectin-attachment protein (FAP)


Domain annotation for each model (and alignments):
>> PF07174.6  Fibronectin-attachment protein (FAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   7.1   8.6e-05       1.2      47     122 ..      22      95 ..       2     100 .. 0.53

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 8.6e-05
    PF07174.6  47 apPstaaaaPapaapvaepapaaapapapadpnaaaPpapadPnapvPppvdPnapappapepgrvdnavGGfsyv 122
                     ++++aa a+ a++a +   a  a++p       P++pad  +++  +v    p  ++p+p+r   a GGf+ +
  MMETSP1325-20131115|11885_1  22 EKLAAQQAAEAAVANEAGSDAEAVEASQPELRTE--PASPADCTTTAMRAVISPPPLDTKPQPSRKRAASGGFACI 95 
                  1223333333333333334444444445554444..335566666555555444566699*************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       988  (0.0722645); expected 273.4 (0.02)
Passed bias filter:                      621  (0.0454213); expected 273.4 (0.02)
Passed Vit filter:                        73  (0.00533938); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.44s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 452.65
//
Query:       MMETSP1325-20131115|11886_1  [L=252]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.1    9.2   8.1       0.17   11.8   0.3    2.4  2  PF05093.8  Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
        1.3    6.7   7.5        1.7    6.4   5.2    1.1  1  PF02724.9  CDC45-like protein
        5.7    6.3  11.0        9.8    5.5   7.6    1.3  1  PF03066.10 Nucleoplasmin


Domain annotation for each model (and alignments):
>> PF05093.8  Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   3.7e-05      0.17      69      87 ..      26      44 ..       8      50 .. 0.80
   2 ?    0.4   1.5      0.13     6e+02      34      72 ..      81     120 ..      47     130 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3.7e-05
    PF05093.8 69 kssCgsCaLGDAFRCssCP 87
                 +++Cg C L +AFR s+ P
  MMETSP1325-20131115|11886_1 26 EGTCGKCGLSNAFRVSTVP 44
                 499*************998 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.13
    PF05093.8  34 eeeeeekkeksakeeek.klleeeelaeldlkvegkkssC 72 
                  e+ee++++++ +++e++  ++ ++e ++++ +  +k++ C
  MMETSP1325-20131115|11886_1  81 EMEEDAEEDEYSDHEDEdDEYADDENDKVTTNKGQKTGMC 120
                  4444333333333333212233333333333333334555 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.2   0.00038       1.7     105     199 ..      58     151 ..      33     167 .. 0.42

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.00038
    PF02724.9 105 gdieeeleke..eeerdayealvemkeeee.eesdedsdseddeeeeessasekrksesde.deeddddeededeeqrkrsnesslakslrrrrrrere 199
                  g+   ++e +      ++ ++ +em+e  e +e  +++d++d+  ++e+++ + +k ++      ++  + d++ +++kr+   +  +++ ++     +
  MMETSP1325-20131115|11886_1  58 GEKRRKVELKerRLRMEILKQFQEMEEDAEeDEYSDHEDEDDEYADDENDKVTTNKGQKTGmCTVAKWLKSDGELMREKRRDALEGLRQKSQE-----R 151
                  444444443300222234444444443333333344444444444444444333333322202233333444444444444442222222222.....2 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   7.6    0.0022       9.8     112     146 ..      79     113 ..      58     117 .. 0.63

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0022
                  ......----XXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF03066.10 112 desldeeddeedeeeeddeedddeeeeeeeespvk 146
                   ++++e+ +e+++++++de+d+ +++e+++ + +k
  MMETSP1325-20131115|11886_1  79 FQEMEEDAEEDEYSDHEDEDDEYADDENDKVTTNK 113
                  34555566666666666666555555555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1065  (0.0778964); expected 273.4 (0.02)
Passed bias filter:                      606  (0.0443242); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.51
# Mc/sec: 1184.08
//
Query:       MMETSP1325-20131115|11896_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-05   22.7   0.2    6.2e-05   22.4   0.1    1.1  1  PF00141.18 Peroxidase


Domain annotation for each model (and alignments):
>> PF00141.18  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   4.5e-09   6.2e-05      82     145 ..       2      85 ..       1      86 [] 0.78

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 4.5e-09
                  HHHHHHHHH-----.--EE--..--------.....-....................-......HHHHHHHHH----HHHHHHH-- CS
   PF00141.18  82 laardavelaggplvpvslGR..rDatessasevsnl....................PdpkasadelrdkfarkgltdeelvaLsG 145
                  l++++a+e+ g p   v+lGR  rD+++++ ++  ++                    P+p a+ ++++d f+   ltd+el++L+G
  MMETSP1325-20131115|11896_1   2 LGGAAALESVGAPPLSVQLGRteRDGLRADLKKG-GVkptaseelllsafsrddlvtPNP-AQEKAVADAFRTSSLTDRELTVLLG 85 
                  899**********66******5557777777444.2345677777777777777766655.67778******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 374.70
//
Query:       MMETSP1325-20131115|11902_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 192.65
//
Query:       MMETSP1325-20131115|11904_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.9   0.2     0.0019   18.2   0.0    2.1  2  PF00856.23 SET domain


Domain annotation for each model (and alignments):
>> PF00856.23  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.018   2.4e+02       7      32 ..      48      86 ..      43     105 .. 0.72
   2 !   18.2   0.0   1.4e-07    0.0019     131     163 ..     115     144 ..     103     145 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.018
                 SS-B----EEEEECCCEEECCCCHH.............. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.............x RF
   PF00856.23  7 tedipkGefvceyvgelltddeaek.............a 32
                 ++   +G+ +++  g+++   ea+k             +
  MMETSP1325-20131115|11904_1 48 SQTCDAGTKLLCEEGRVIKRPEAKKllndpgwkhanpvI 86
                 55667999999********99999977666665555441 PP

  == domain 2    score: 18.2 bits;  conditional E-value: 1.4e-07
                  SEEEEEEESTTSSEEEEEESS-B-TT-B-EE-- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00856.23 131 NltvqfvfvtrgprvalrAtrdIpkGeEltidY 163
                  N ++     t+++r++++A+r+I ++eEl++ Y
  MMETSP1325-20131115|11904_1 115 NIEIVR---TGEGRIEVVALRNIYEDEELFWEY 144
                  444444...69********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 811.49
//
Query:       MMETSP1325-20131115|11903_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-46  156.1   0.0      7e-46  155.7   0.0    1.1  1  PF00227.21 Proteasome subunit
    6.4e-15   54.0   0.1    1.6e-14   52.8   0.0    1.7  1  PF10584.4  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.7   0.0     1e-49     7e-46       3     188 ..      33     216 ..      31     218 .. 0.94

  Alignments for each domain:
  == domain 1    score: 155.7 bits;  conditional E-value: 1e-49
                  C--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHH..HHHHHHHHHHHHHHBTTHCTSEEEE CS
   PF00227.21   3 kGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleea..velavkalkealerdklsgknveva 188
                  +G t+v+++gkd   l+ +k+++  + l+++++v  +++i+++ig+ ++Gl+aD+r+ v r+r+ea+++++++g++++v++l+kr+a++ q+ytq++  r++ +++++a vd+e gp++++id +Gs++   +a+a G+ +  a++ lek++  + + +ea  ++la+ +l++++  d ++g+ +e++
  MMETSP1325-20131115|11903_1  33 TGLTAVAVRGKDSCALVIQKKVP--DRLIDPDSVTYVYQITEKIGCLMTGLTADCRAQVTRLRQEAHEFKFKFGYDMPVHVLAKRIADICQVYTQEASLRMLACNVILAAVDDERGPNIFKIDSAGSYFPF-RATASGNKTAEAMNWLEKKVDAEPSTDEAgtMQLAIMCLQHVMSSD-FKGSDLECG 216
                  799********************..**********************************************************************************************************.6*****99999*********66666666555*************77.999888875 PP

>> PF10584.4  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   2.3e-18   1.6e-14       1      23 []       7      29 ..       7      29 .. 0.99

  Alignments for each domain:
  == domain 1    score: 52.8 bits;  conditional E-value: 2.3e-18
                 T---TT--------HHHHHHHHH CS
    PF10584.4  1 YDrslTtFSPdGRLfQVEYAlkA 23
                 YDr++T+FSP+GRL+QVEYA+kA
  MMETSP1325-20131115|11903_1  7 YDRHITIFSPQGRLYQVEYAIKA 29
                 **********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1193.29
//
Query:       MMETSP1325-20131115|11910_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|11915_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-17   63.6   0.0    2.8e-08   33.6   0.0    2.3  2  PF00498.21 FHA domain
  ------ inclusion threshold ------
      0.064   12.0   0.0      0.094   11.5   0.0    1.2  1  PF10946.3  Protein of unknown function DUF2625


Domain annotation for each model (and alignments):
>> PF00498.21  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   2.4e-10   1.6e-06       2      49 ..      37      83 ..      36      95 .. 0.88
   2 !   33.6   0.0   4.1e-12   2.8e-08       3      68 .]     144     211 ..     142     211 .. 0.92

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 2.4e-10
                 EE-E-TTSSS---TTTS-TTCEEEEEEETCEEEEEEECST--E.EETTE CS
   PF00498.21  2 tiGRssdcdivlddpsiSrkHalikydeggkfyleDlgSknGt.fvNgq 49
                  iGR+++c + + ++ +S+kH +i y++g kf +  l S  Gt   N++
  MMETSP1325-20131115|11915_1 37 MIGREKPCEVLVANSEVSKKHLQIIYEDG-KFVVSTL-SQYGTgLFNEE 83
                 79***************************.******9.89999444655 PP

  == domain 2    score: 33.6 bits;  conditional E-value: 4.1e-12
                  E-E-TTSSS---..TTTS-TTCEEEEEEETCEEEEEEECST--EEETT.EECSTTSEEEE-TTEEEEEC CS
   PF00498.21   3 iGRssdcdivld..dpsiSrkHalikydeggkfyleDlgSknGtfvNg.qrigkgepvrLksgdvielG 68 
                  +GRs++c+i ++   +siS kH +++ + +g++++ D +S+ Gt + g  +++kg+++ + +g ++e+G
  MMETSP1325-20131115|11915_1 144 VGRSEECQIKMPtaGSSISGKHLEFTKHVDGGWTVMD-NSTFGTLICGdWPLRKGKKCLVVPGMTLEIG 211
                  9***********877**********************.9*****9955489999999999999999998 PP

>> PF10946.3  Protein of unknown function DUF2625
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.4e-05     0.094      22      90 ..      40     116 ..      30     125 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.4e-05
    PF10946.3  22 aknkveilpadeekaeeeLl......alqvttrsplGavvyetG..GilideGwlRilGsgneklkrgladwnkgkt 90 
                   ++++e+l a++e ++++L       +  v+t s+ G+ +++     ++ ++    i Gsg  kl r+++ +n++k 
  MMETSP1325-20131115|11915_1  40 REKPCEVLVANSEVSKKHLQiiyedgKFVVSTLSQYGTGLFNEEavTVVAENDSAPISGSGLMKLGRSIVGFNSKKL 116
                  56789********9999997333333567*********9997651156778999*******************9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 1061.92
//
Query:       MMETSP1325-20131115|11920_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-09   37.7   0.1    1.8e-09   37.5   0.0    1.0  1  PF01625.16 Peptide methionine sulfoxide reductase


Domain annotation for each model (and alignments):
>> PF01625.16  Peptide methionine sulfoxide reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.0   1.3e-13   1.8e-09     119     155 ..       6      42 ..       2      43 .. 0.91

  Alignments for each domain:
  == domain 1    score: 37.5 bits;  conditional E-value: 1.3e-13
   PF01625.16 119 kskkivteiepletFypaeeyhqdYleknpkrycsir 155
                   ++++ t++ p++tFypae+yhq Yle+np +yc++r
  MMETSP1325-20131115|11920_1   6 SGDTVSTAVVPATTFYPAEAYHQAYLENNPGGYCNHR 42 
                  57899*****************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 262.24
//
Query:       MMETSP1325-20131115|11925_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.085   12.3   0.4       0.11   11.9   0.3    1.2  1  PF01809.13 Haemolytic domain


Domain annotation for each model (and alignments):
>> PF01809.13  Haemolytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   8.1e-06      0.11      15      62 ..       5      53 ..       3      57 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.1e-06
   PF01809.13 15 lispllgpsCrfyPtCSeY.aiealekhGllkGlwlalkRilrChplgk 62
                 ++ pl+ + C f  tCS+  ++ a++   + +G+  +++ +  C p g+
  MMETSP1325-20131115|11925_1  5 VLLPLVDTPCMFALTCSKRrMYVAFNAAYVPQGCSETTRSVSWCAPAGS 53
                 56789999*********86267789999999999999999999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|11933_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-05   24.0   0.1    5.3e-05   23.4   0.0    1.4  1  PF07876.7  Stress responsive A/B Barrel Domain
  ------ inclusion threshold ------
      0.061   12.9   0.0       0.14   11.7   0.0    1.6  2  PF02742.10 Iron dependent repressor, metal binding and dimerisation domain


Domain annotation for each model (and alignments):
>> PF07876.7  Stress responsive A/B Barrel Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   7.7e-09   5.3e-05      50      87 ..       9      47 ..       3      61 .. 0.86

  Alignments for each domain:
  == domain 1    score: 23.4 bits;  conditional E-value: 7.7e-09
                 -----EEEEEEESSHHHHHHHHTSHHHHHHH.HHHHHTE CS
    PF07876.7 50 akgydhalvseFeseedlkaYlehpahvafv.elvkpll 87
                 a++ d a+v  F+s+ed++ Y+ hpah + +   + pll
  MMETSP1325-20131115|11933_1  9 ARNHDLAVVALFDSAEDYEVYASHPAHLEIIkLAIAPLL 47
                 567899***********************9977777776 PP

>> PF02742.10  Iron dependent repressor, metal binding and dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.39   2.7e+03      20      20 ..      17      17 ..       4      40 .. 0.62
   2 ?   11.7   0.0     2e-05      0.14      26      55 ..      57      86 ..      55      87 .] 0.91

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 0.39
   PF02742.10 20 r 20
                 +
  MMETSP1325-20131115|11933_1 17 V 17
                 2 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 2e-05
   PF02742.10 26 lgvdweevheeAerlEHvlsdelidrldel 55
                 + ++ ++++ eA + EHv + +++ rl++l
  MMETSP1325-20131115|11933_1 57 IPFNPDRAEAEAVKTEHVRTTSILSRLYDL 86
                 56899**********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 425.48
//
Query:       MMETSP1325-20131115|11934_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 654.01
//
Query:       MMETSP1325-20131115|11938_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   12.5   0.1        0.1   12.2   0.0    1.1  1  PF07096.6 Protein of unknown function (DUF1358)


Domain annotation for each model (and alignments):
>> PF07096.6  Protein of unknown function (DUF1358)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   7.3e-06       0.1      28      70 ..      29      71 ..      22      78 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 7.3e-06
    PF07096.6 28 ikggaflglvaaisalaGfsktlslakkkdpkffekGvaasia 70
                 ++++  lg  a   +l G    ++ akk+++++fe  v+++  
  MMETSP1325-20131115|11938_1 29 VRSATDLGGAAMDMMLPGAEDGMTAAKKSETNVFEATVQGGCG 71
                 78888999999999*********************99998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.33s 00:00:00.67 Elapsed: 00:00:00.70
# Mc/sec: 280.72
//
Query:       MMETSP1325-20131115|11942_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.7e-19   67.5   0.0    1.1e-18   67.4   0.0    1.0  1  PF07059.7 Protein of unknown function (DUF1336)


Domain annotation for each model (and alignments):
>> PF07059.7  Protein of unknown function (DUF1336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.0   7.9e-23   1.1e-18     163     224 ..       2      63 ..       1      66 [. 0.96

  Alignments for each domain:
  == domain 1    score: 67.4 bits;  conditional E-value: 7.9e-23
    PF07059.7 163 kyvrgenylEidvdihsssvarkilelvlgylkklvlDlalliegqteeELPErvLgavrln 224
                   y+rge+y+E d+ i+ss++a++i+ l +gy k++v+Dla+  eg+ eeELPE+++g  r +
  MMETSP1325-20131115|11942_1   2 RYFRGEGYVETDIHIGSSAIANNITGLSRGYAKQMVVDLAFCLEGRAEEELPEKLIGVARYR 63 
                  69*******************************************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 455.78
//
Query:       MMETSP1325-20131115|11943_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00019   21.5   0.0     0.0003   20.8   0.0    1.3  2  PF13692.1 Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> PF13692.1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.63   8.6e+03     121     133 ..      20      32 ..      11      34 .. 0.68
   2 !   20.8   0.0   2.2e-08    0.0003      51     107 ..      64     124 ..      43     133 .. 0.77

  Alignments for each domain:
  == domain 1    score: -3.4 bits;  conditional E-value: 0.63
    PF13692.1 121 dpeelaealvrll 133
                  d++e +++lv+l+
  MMETSP1325-20131115|11943_1  20 DAAEYYQKLVELA 32 
                  6666777777765 PP

  == domain 2    score: 20.8 bits;  conditional E-value: 2.2e-08
    PF13692.1  51 lepnveflgfv.e..elaellasadvglaplrfge.glplKlleylaaGlPvvasdigaeg 107
                  ++p v f     +  el   l+sa+v + p+  ++ ++++ +  ++++G  +v+++++++ 
  MMETSP1325-20131115|11943_1  64 TAPSVVFNSQFtPtrELITKLRSAHVYVNPYTDRSqSVSGTVAMAMSTGAAIVSTPYPFAV 124
                  4677777655544459***************7555679******************96443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 698.07
//
Query:       MMETSP1325-20131115|11944_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.055   13.3   1.1      0.098   12.4   0.6    1.5  2  PF13424.1 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0      0.84   1.1e+04      49      55 ..      11      17 ..       9      24 .. 0.57
   2 ?   12.4   0.6   7.2e-06     0.098       3      59 ..      64     121 ..      62     127 .. 0.92

  Alignments for each domain:
  == domain 1    score: -3.8 bits;  conditional E-value: 0.84
    PF13424.1 49 lnnlanl 55
                 l++++n+
  MMETSP1325-20131115|11944_1 11 LHHMGNV 17
                 3444443 PP

  == domain 2    score: 12.4 bits;  conditional E-value: 7.2e-06
    PF13424.1   3 dlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylal 59 
                  +l ++l++la+ + +  d + A   y + l++ + ++g++h++t+ra + l ++++a+
  MMETSP1325-20131115|11944_1  64 ELCSSLSELADYHAAFCDRELASVGYAELLAVlANKHGPRHAETLRAQTKLXITLWAQ 121
                  57789***************************999************99998888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 849.14
//
Query:       MMETSP1325-20131115|11947_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0007   18.8   0.8      0.001   18.3   0.4    1.5  1  PF02197.12 Regulatory subunit of type II PKA R-subunit


Domain annotation for each model (and alignments):
>> PF02197.12  Regulatory subunit of type II PKA R-subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.4   7.3e-08     0.001      13      31 ..      24      42 ..      12      45 .. 0.90

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 7.3e-08
                 HHHHH--S-HHHHHHHHHH CS
   PF02197.12 13 eVlraqPsDllqFaadYFe 31
                  Vl +qP+D+l Fa ++F+
  MMETSP1325-20131115|11947_1 24 KVLDEQPDDVLTFACEFFS 42
                 69****************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      340  (0.0248683); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 298.32
//
Query:       MMETSP1325-20131115|11940_1  [L=536]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       564  (0.0412522); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.87u 0.35s 00:00:01.22 Elapsed: 00:00:00.56
# Mc/sec: 2293.66
//
Query:       MMETSP1325-20131115|11954_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-27   93.1   4.8    6.1e-27   92.8   3.4    1.1  1  PF06825.7  Heat shock factor binding protein 1
     0.0097   15.4   0.1      0.061   12.9   0.1    2.0  2  PF09277.6  Erythronolide synthase, docking
  ------ inclusion threshold ------
      0.034   13.5   0.0      0.039   13.3   0.0    1.2  1  PF01580.13 FtsK/SpoIIIE family
      0.041   13.0   0.8       0.35   10.0   0.1    2.1  2  PF12841.2  YvrJ protein family
      0.076   11.6   0.0      0.091   11.3   0.0    1.0  1  PF09903.4  Uncharacterized protein conserved in bacteria (DUF2130)
       0.17   11.1   0.7       0.21   10.8   0.5    1.1  1  PF11101.3  Protein of unknown function (DUF2884)


Domain annotation for each model (and alignments):
>> PF06825.7  Heat shock factor binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   3.4   2.7e-30   6.1e-27       1      54 []      15      68 ..      15      68 .. 0.98

  Alignments for each domain:
  == domain 1    score: 92.8 bits;  conditional E-value: 2.7e-30
    PF06825.7  1 skelnayVqnLLkqmqdrFedmSdnivgriDeMgkriDdLEksvsdlmndlgvd 54
                 s++l+++Vq+LL+qmq+rF++mSd+i+griDeMg riDdLEks++dlm+++gvd
  MMETSP1325-20131115|11954_1 15 SQDLTIFVQSLLEQMQSRFTQMSDQIIGRIDEMGGRIDDLEKSITDLMDQAGVD 68
                 69**************************************************97 PP

>> PF09277.6  Erythronolide synthase, docking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.24   5.5e+02      35      47 ..      22      34 ..      10      41 .. 0.76
   2 !   12.9   0.1   2.7e-05     0.061       8      31 ..      47      70 ..      43      73 .. 0.90

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHHH CS
    PF09277.6 35 LeaLLRRWnsRRa 47
                 + +LL   +sR +
  MMETSP1325-20131115|11954_1 22 VQSLLEQMQSRFT 34
                 6799999999965 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 2.7e-05
                 ---HHHHHHHHHHHHTT----TT- CS
    PF09277.6  8 vGdRLDeLekaLeaLsdedGhdDv 31
                 +G R+D+Lek +  L d+ G d v
  MMETSP1325-20131115|11954_1 47 MGGRIDDLEKSITDLMDQAGVDPV 70
                 79*****************99877 PP

>> PF01580.13  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.7e-05     0.039      93     145 ..       7      59 ..       4      90 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.7e-05
   PF01580.13  93 lsvavatdpekalraleelvaemeeRyallkqlgvrsieeydgeiaevpldgf 145
                  ++va +++++++  +++ l+++m++R+  +++  +  i+e  g+i  +++ + 
  MMETSP1325-20131115|11954_1   7 GEVAAPANSQDLTIFVQSLLEQMQSRFTQMSDQIIGRIDEMGGRIDDLEKSIT 59 
                  5789999********************************99999988776654 PP

>> PF12841.2  YvrJ protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.072   1.6e+02      16      31 ..      25      40 ..      24      47 .. 0.80
   2 ?   10.0   0.1   0.00015      0.35      22      37 ..      49      64 ..      46      65 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.072
    PF12841.2 16 LLvRiEkkldaLtksI 31
                 LL ++++++ +++++I
  MMETSP1325-20131115|11954_1 25 LLEQMQSRFTQMSDQI 40
                 6777888888888887 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00015
    PF12841.2 22 kkldaLtksIneLska 37
                 +++d+L+ksI++L+++
  MMETSP1325-20131115|11954_1 49 GRIDDLEKSITDLMDQ 64
                 79***********975 PP

>> PF09903.4  Uncharacterized protein conserved in bacteria (DUF2130)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0     4e-05     0.091     196     237 ..      22      63 ..      14      66 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 4e-05
    PF09903.4 196 leefleaivknfesaskklekeikeidKaikklekqkekvle 237
                  +++ le++   f+++s+++   i+e+   i++lek++ ++++
  MMETSP1325-20131115|11954_1  22 VQSLLEQMQSRFTQMSDQIIGRIDEMGGRIDDLEKSITDLMD 63 
                  5678899999*****************************995 PP

>> PF11101.3  Protein of unknown function (DUF2884)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.5     9e-05      0.21     149     189 ..      22      64 ..      13      68 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 9e-05
    PF11101.3 149 lgsilqalgsemlssegg...ekltaleermdelgeeieeeles 189
                  ++s+l++++s +  + ++    +++++ +r+d+l++ i   +++
  MMETSP1325-20131115|11954_1  22 VQSLLEQMQSRFT-QMSDqiiGRIDEMGGRIDDLEKSITDLMDQ 64 
                  5555555555553.333336689***************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       650  (0.0475424); expected 273.4 (0.02)
Passed bias filter:                      611  (0.0446899); expected 273.4 (0.02)
Passed Vit filter:                        76  (0.00555881); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 428.58
//
Query:       MMETSP1325-20131115|11953_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.48
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|11955_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.01   15.5   0.5      0.021   14.5   0.3    1.5  1  PF06072.6  Alphaherpesvirus tegument protein US9
      0.023   15.1   0.1      0.023   15.1   0.1    2.7  2  PF13428.1  Tetratricopeptide repeat
      0.039   13.7   0.0       0.13   12.1   0.0    1.9  1  PF07719.12 Tetratricopeptide repeat
      0.071   12.4   0.0       0.11   11.8   0.0    1.2  1  PF13525.1  Outer membrane lipoprotein
        0.1   12.9   0.1        0.1   12.9   0.1    3.7  4  PF07721.9  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF06072.6  Alphaherpesvirus tegument protein US9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.3   7.5e-06     0.021      10      51 ..     118     159 ..     116     163 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 7.5e-06
    PF06072.6  10 tAteFLrRvGrrqhakrrrrRrcllavaivfvvvvlcvlsgl 51 
                  +At+  rR+ r++ ++r+rr+ ++l+va+ ++ ++ +v++++
  MMETSP1325-20131115|11955_1 118 KATDLQRRILRKKDEQRERRQATGLVVAAGVALLAGAVMAAV 159
                  689999******************999888887776666543 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   1.2       1.1   3.1e+03      19      37 ..      21      39 ..      12      43 .. 0.60
   2 ?   15.1   0.1   8.4e-06     0.023       6      36 ..      88     118 ..      84     128 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 1.1
    PF13428.1 19 eAiallrralalaPddaea 37
                  A+ ++ ra a+  ++aea
  MMETSP1325-20131115|11955_1 21 LAVPAAARAWADEKERAEA 39
                 4555555555555555554 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 8.4e-06
    PF13428.1   6 alarallalGdpdeAiallrralalaPddae 36 
                  ala a++a+Gd+++A a+  r+l+ +P++  
  MMETSP1325-20131115|11955_1  88 ALAKAYMASGDLEAAQAHVCRLLRMCPGHTK 118
                  89*************************8765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.7e-05      0.13       5      33 ..      87     115 ..      84     116 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 4.7e-05
                  HHHHHHHHHTT-HHHHHHHHHHHHHH-TT CS
   PF07719.12   5 ynlGlayyklgdyeeAleafekAleldPn 33 
                  ++l++ay+++gd+e A ++  + l+ +P+
  MMETSP1325-20131115|11955_1  87 FALAKAYMASGDLEAAQAHVCRLLRMCPG 115
                  89***************998777777776 PP

>> PF13525.1  Outer membrane lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     4e-05      0.11      40      78 ..      81     119 ..      77     121 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4e-05
    PF13525.1  40 yaeqaqldliyAyykskdyeaaiataerFirlyPrhpnv 78 
                  + +++  +l++Ay+ s d+eaa+a + r +r+ P+h ++
  MMETSP1325-20131115|11955_1  81 HLDDVSFALAKAYMASGDLEAAQAHVCRLLRMCPGHTKA 119
                  5678999*****************************875 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   1.1      0.15   4.1e+02      17      26 .]      24      33 ..      24      33 .. 0.87
   2 ?   -2.8   0.0       4.4   1.2e+04       7      12 ..      52      57 ..      50      59 .. 0.67
   3 ?   12.9   0.1   3.7e-05       0.1       5      23 ..      87     105 ..      85     106 .. 0.92
   4 ?   -2.4   0.6       3.4   9.4e+03       6       6 ..     153     153 ..     143     162 .. 0.53

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.15
                 ----HHHHHT CS
    PF07721.9 17 ldeAraller 26
                 +++Ara++++
  MMETSP1325-20131115|11955_1 24 PAAARAWADE 33
                 699****986 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 4.4
                 -HHHHH CS
    PF07721.9  7 LArall 12
                 LA++l 
  MMETSP1325-20131115|11955_1 52 LAWLLS 57
                 788775 PP

  == domain 3    score: 12.9 bits;  conditional E-value: 3.7e-05
                  ---HHHHHH-------HHH CS
    PF07721.9   5 laLArallalGdldeAral 23 
                  +aLA a+ a Gdl++A+a+
  MMETSP1325-20131115|11955_1  87 FALAKAYMASGDLEAAQAH 105
                  58***************98 PP

  == domain 4    score: -2.4 bits;  conditional E-value: 3.4
                  - CS
    PF07721.9   6 a 6  
                  +
  MMETSP1325-20131115|11955_1 153 G 153
                  2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      395  (0.0288912); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 753.76
//
Query:       MMETSP1325-20131115|11959_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0024   17.6   0.0     0.0032   17.2   0.0    1.2  1  PF12697.2 Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.3e-07    0.0032      86     226 ..       1     168 [.       1     170 [. 0.61

  Alignments for each domain:
  == domain 1    score: 17.2 bits;  conditional E-value: 2.3e-07
                  ----.EEEEEEE------STT........---TTHHHHHHHHHH----....--H..HHHHH-----HHHH.........HH.......--GGGG....GG...........------.HHHHTT--S-EEEEE-----HHH.....HHHHHHHHHHSTTEEEEE---SSSS-...-HHHHH CS
    PF12697.2  86 rrpdlvrglvlidppgplpas........alrpagpsllrrllagraaalrdlaarafarlfdgdelealv.........ra.......daaalaellraa...........lldadl.realarldvPvlviageaDrvvp.....peearrlaealpgarvvvlpgagHllfleapdeva 226
                  r+p+l+ g+v +d++ ++p +         ++++   ++ +l+   ++ +++l + ++++l+ +  + ++v          +       +          +           ll+ ++ ++  +  +vP l++ g + rv         +++r  e+ +g+ +  l+++gH+++ + + eva
  MMETSP1325-20131115|11959_1   1 RYPELFNGMVCLDVGMFSPLEctplqvavIATYQ---TWLALAFLISQLFKGLGGQSIGDLMCAFFPWKWVgptpyeykiPRnireihcW----------McypyfrligagLLGKLPtPAFPPDKGVPLLYVFGQKKRVFFhtssfLKNIDR-EEGRGGTAYRMLEQCGHWVQTQGAGEVA 168
                  6899************999989998866633333...33333333344445555555555555555555553332222222122222220..........133345555666444444147777789************98776344444444.3467899*************99888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       210  (0.0153599); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 948.12
//
Query:       MMETSP1325-20131115|11952_1  [L=332]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-52  176.7  12.6    7.7e-52  176.2   8.6    1.3  1  PF00112.18 Papain family cysteine protease
    4.3e-14   52.4   0.4    7.2e-14   51.6   0.3    1.4  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)
    2.8e-05   22.7   0.5      0.052   11.9   0.1    2.2  2  PF03051.10 Peptidase C1-like family
     0.0089   15.9   0.3      0.023   14.6   0.1    1.8  1  PF03732.12 Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.2   8.6   2.3e-55   7.7e-52       6     218 ..     120     326 ..     115     328 .. 0.91

  Alignments for each domain:
  == domain 1    score: 176.2 bits;  conditional E-value: 2.3e-55
                  -CCCTT.GGG---B------HHHHHHHHHHHHHHHHHHS.S---B-HHHHHHH-TTTS-...TT----HHHHHHHHHHC---BBTTTS---SSC-....S--CCCC--C.CCCECEEEEEESS..-HHHHHHHHHH-S-EEEEE--CCHCCTTEEE--BSSTCC-TTG--EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
   PF00112.18   6 DwrekkgavtpvkdqgqCGsCWafsavgalegrlaiktkkklvslSeqelvdCskeene...gCnGGlmenafeyikknggivtekdypYkakeg...gkCkkkkkkekevakikgygkvken..seealkkalakngPvsvaidaseedfqlYksGvyketecsstelnhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                  Dw     + tpvkdqg CGsCWafsa++++e+ l  +  ++ + lS+q+  +C+  +n    gCnGG    a+ y+ +  gi+t++dypY++ e    g+C+++++k   vak++gy++v+++   e+++++ + ++gP+sv++da+++  ++Y++Gv+++  c + +++h v++vG ++e +++yW ++NSWgt+wGe+G+ir+a g+n +c+++sea+y
  MMETSP1325-20131115|11952_1 120 DWTG--VYTTPVKDQGYCGSCWAFSATEQMESDLWRTG-GTEMILSAQQTTTCTY-RNIivgGCNGGNTGPAYTYLES--GIETDADYPYTSGEAgvtGTCQADSSK--FVAKTTGYTTVSSSasGESSMATYVGATGPLSVCVDAESW--SSYTGGVMSS--CGN-SVDHCVQAVGINTEASEPYWKIRNSWGTSWGESGFIRLAYGSN-MCDLASEATY 326
                  6655..578**************************999.79************96.555789*************997..***********66555679***99886..4699999999988877899*******************95..9********8..996.9****************************************88.*******988 PP

>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.3   2.1e-17   7.2e-14       1      58 []      30      87 ..      30      87 .. 0.98

  Alignments for each domain:
  == domain 1    score: 51.6 bits;  conditional E-value: 2.1e-17
    PF08246.7  1 FeswmdaygkkYrhsseinerfenFkeNlrqiqehNanknvtftlglNkfsDlsheEf 58
                 +++++++++k Y++ +e+  rfe+F +Nl +i e Na +  + t g++kf+Dls+ Ef
  MMETSP1325-20131115|11952_1 30 WNQFKADFNKVYENAEEEAARFETFVRNLAIIDERNAAETGSATHGITKFADLSPAEF 87
                 9***********************************9999999**************9 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00012       0.4      52      82 ..     123     153 ..      76     167 .. 0.84
   2 !   11.9   0.1   1.5e-05     0.052     359     395 ..     275     309 ..     265     314 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00012
   PF03051.10  52 evetdevtnqkqsGRCWlFaalnvlRlkllk 82 
                   v t +v +q   G CW F+a+ ++  +l +
  MMETSP1325-20131115|11952_1 123 GVYTTPVKDQGYCGSCWAFSATEQMESDLWR 153
                  567889*****************99887765 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 1.5e-05
   PF03051.10 359 mtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyf 395
                  ++H +  +g++   + +   wk+ nsWG   Ge G+ 
  MMETSP1325-20131115|11952_1 275 VDHCVQAVGINT--EASEPYWKIRNSWGTSWGESGFI 309
                  667777777776..556668***************86 PP

>> PF03732.12  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   6.7e-06     0.023       4      47 ..       8      48 ..       5      60 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 6.7e-06
   PF03732.12  4 stsLegrAkswlkslvarsidasesWkdlkkafrktflpserkd 47
                 +++L g+ ++ ++++++++++    W+++k  f+k ++++e+++
  MMETSP1325-20131115|11952_1  8 ALALVGANAKLYTEHKESQMY---MWNQFKADFNKVYENAEEEA 48
                 56789999*************...9**************55443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       615  (0.0449824); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.40s 00:00:01.10 Elapsed: 00:00:00.63
# Mc/sec: 1262.84
//
Query:       MMETSP1325-20131115|11960_1  [L=158]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-05   23.7   0.9      5e-05   22.7   0.6    1.6  1  PF13833.1  EF-hand domain pair
    0.00012   20.9   2.7     0.0013   17.8   0.2    2.7  2  PF00036.27 EF hand
     0.0014   18.6   0.4     0.0059   16.6   0.0    2.1  2  PF13499.1  EF-hand domain pair
      0.003   17.2   0.4      0.092   12.5   0.1    2.7  2  PF13405.1  EF-hand domain
  ------ inclusion threshold ------
      0.081   12.1   0.7      0.081   12.1   0.5    2.5  4  PF13202.1  EF hand


Domain annotation for each model (and alignments):
>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.6   1.8e-08     5e-05       7      54 .]      94     150 ..      90     150 .. 0.81

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 1.8e-08
    PF13833.1   7 reeLkralallglkg.........lseeevdilfrefDtdgdGkisfeEFcvllerl 54 
                   e+++++l+ + l +         ls+ e+ +l   +D+dgdG ++  EF+ l++rl
  MMETSP1325-20131115|11960_1  94 LESFSCILTPMQLRRqlfhsfemkLSDAELAALCADMDRDGDGVLDGSEFMILFFRL 150
                  578888884433333678888888*****************************9986 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.028        78      14      25 ..       3      14 ..       2      18 .. 0.83
   2 !   17.8   0.2   4.6e-07    0.0013       2      26 ..     123     147 ..     122     150 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.028
                 SSEBEHHHHHHH CS
   PF00036.27 14 dGkIsfeEfkea 25
                 dG+I+  Ef   
  MMETSP1325-20131115|11960_1  3 DGYIEGYEFTLG 14
                 9********765 PP

  == domain 2    score: 17.8 bits;  conditional E-value: 4.6e-07
                  HHHHHHHHCTTTSSEBEHHHHHHHH CS
   PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkeal 26 
                  l  + + +D+DgdG ++ +Ef+ ++
  MMETSP1325-20131115|11960_1 123 LAALCADMDRDGDGVLDGSEFMILF 147
                  5667789**************9876 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.31   8.6e+02      14      29 ..       3      18 ..       2      56 .. 0.66
   2 !   16.6   0.0   2.2e-06    0.0059      34      64 ..     105     145 ..      66     147 .. 0.81

  Alignments for each domain:
  == domain 1    score: 0.0 bits;  conditional E-value: 0.31
    PF13499.1 14 dgyldkeeLlrllkhl 29
                 dgy++  e++  + ++
  MMETSP1325-20131115|11960_1  3 DGYIEGYEFTLGFFRM 18
                 7788777777666554 PP

  == domain 2    score: 16.6 bits;  conditional E-value: 2.2e-06
    PF13499.1  34 s..........deevrevldyifkelDkngdGvlsfeEflq 64 
                             ++ ++ +l ++ +++D +gdGvl+ +Ef+ 
  MMETSP1325-20131115|11960_1 105 QlrrqlfhsfeMKLSDAELAALCADMDRDGDGVLDGSEFMI 145
                  33344555556999999**********************86 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.11   2.9e+02      14      24 ..       3      13 ..       2      22 .. 0.79
   2 !   12.5   0.1   3.4e-05     0.092       9      25 ..     130     146 ..     122     151 .. 0.83

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.11
                 ---B---HHHH CS
    PF13405.1 14 dGkidaeELrd 24
                 dG+i+  E+  
  MMETSP1325-20131115|11960_1  3 DGYIEGYEFTL 13
                 9*******964 PP

  == domain 2    score: 12.5 bits;  conditional E-value: 3.4e-05
                  C-------B---HHHHH CS
    PF13405.1   9 fDkdgdGkidaeELrda 25 
                  +D+dgdG +d +E++ +
  MMETSP1325-20131115|11960_1 130 MDRDGDGVLDGSEFMIL 146
                  8*************865 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.5   4.1e+03      13      21 ..       3      11 ..       2      12 .. 0.72
   2 ?   -3.7   0.4       3.1   8.4e+03       9      13 ..      66      70 ..      66      70 .. 0.84
   3 ?   -2.5   0.0       1.2   3.4e+03      15      24 ..     117     126 ..     117     126 .. 0.81
   4 ?   12.1   0.5     3e-05     0.081       7      22 ..     129     144 ..     128     147 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 1.5
                 ---B-HHHH CS
    PF13202.1 13 DGkIsreEL 21
                 DG I   E+
  MMETSP1325-20131115|11960_1  3 DGYIEGYEF 11
                 999976665 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 3.1
                 --S-- CS
    PF13202.1  9 DlNgD 13
                 D+++D
  MMETSP1325-20131115|11960_1 66 DADRD 70
                 89998 PP

  == domain 3    score: -2.5 bits;  conditional E-value: 1.2
                  -B-HHHHHHH CS
    PF13202.1  15 kIsreELkrl 24 
                  k+s  EL +l
  MMETSP1325-20131115|11960_1 117 KLSDAELAAL 126
                  7899999875 PP

  == domain 4    score: 12.1 bits;  conditional E-value: 3e-05
                  HH--S----B-HHHHH CS
    PF13202.1   7 afDlNgDGkIsreELk 22 
                   +D +gDG ++ +E++
  MMETSP1325-20131115|11960_1 129 DMDRDGDGVLDGSEFM 144
                  58************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       611  (0.0446899); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.35s 00:00:00.84 Elapsed: 00:00:00.66
# Mc/sec: 573.67
//
Query:       MMETSP1325-20131115|11964_1  [L=383]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-14   51.3  26.1    2.1e-07   30.5   3.7    2.3  2  PF07716.10 Basic region leucine zipper
    1.7e-13   50.2  22.0    1.7e-07   30.9   7.5    2.3  2  PF00170.16 bZIP transcription factor
  ------ inclusion threshold ------
        3.4    7.8   5.5        5.7    7.0   0.7    2.3  2  PF09969.4  Uncharacterized conserved protein (DUF2203)


Domain annotation for each model (and alignments):
>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   8.9   8.4e-10   3.8e-06       2      52 ..      93     144 ..      92     146 .. 0.90
   2 !   30.5   3.7   4.6e-11   2.1e-07       7      52 ..     266     311 ..     261     312 .. 0.95

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 8.4e-10
   PF07716.10   2 ddeyrerRr.rNreAArrsRekkkakeeeleervkeLeeeNaqLrqkveqLe 52 
                  d+e+ er r rNr+ Ar++R++kka+  +l+e+vkeL+e+  +Lrq + + +
  MMETSP1325-20131115|11964_1  93 DEERLERSReRNRIHARKTRQRKKAMLSNLQETVKELTEKGTRLRQTINERK 144
                  6778888778************************************997765 PP

  == domain 2    score: 30.5 bits;  conditional E-value: 4.6e-11
   PF07716.10   7 erRrrNreAArrsRekkkakeeeleervkeLeeeNaqLrqkveqLe 52 
                  +rR+rNr+ A+r+R +kk+  e++ + +++Le++N  L + ve+Le
  MMETSP1325-20131115|11964_1 266 VRRERNRMHAKRTRIRKKMLIEQTYKVIQRLEAQNKLLGEYVEKLE 311
                  7999**************************************9997 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   7.5   3.7e-11   1.7e-07       5      53 ..      96     144 ..      93     150 .. 0.93
   2 !   24.6   2.3   3.6e-09   1.6e-05       7      53 ..     265     311 ..     260     312 .. 0.91

  Alignments for each domain:
  == domain 1    score: 30.9 bits;  conditional E-value: 3.7e-11
                  CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHH CS
   PF00170.16   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  + er +++NR+ Ar+ RqRKka + +L+e vkeL+++ ++L+++++e k
  MMETSP1325-20131115|11964_1  96 RLERSRERNRIHARKTRQRKKAMLSNLQETVKELTEKGTRLRQTINERK 144
                  67999***************************************99866 PP

  == domain 2    score: 24.6 bits;  conditional E-value: 3.6e-09
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHH CS
   PF00170.16   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                    r+++NR  A+r R RKk+ ie+  + ++ Lea+Nk L + +e+l+
  MMETSP1325-20131115|11964_1 265 HVRRERNRMHAKRTRIRKKMLIEQTYKVIQRLEAQNKLLGEYVEKLE 311
                  57**********************************99988888775 PP

>> PF09969.4  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.7    0.0013       5.7      32      75 ..      95     138 ..      76     142 .. 0.76
   2 ?    2.5   0.2     0.031   1.4e+02      32      68 ..     262     298 ..     238     313 .. 0.64

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0013
    PF09969.4  32 leealeeaekeleaeelkeeleeleeqiraaieeieelGvevkd 75 
                   + + + ++++++a++++++ +++ ++++++++e++e+G  +++
  MMETSP1325-20131115|11964_1  95 ERLERSRERNRIHARKTRQRKKAMLSNLQETVKELTEKGTRLRQ 138
                  3334455566678889999999*****************99987 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.031
    PF09969.4  32 leealeeaekeleaeelkeeleeleeqiraaieeiee 68 
                    e+++ ++++++a++++ + ++l eq+++ i+++e+
  MMETSP1325-20131115|11964_1 262 DIEHVRRERNRMHAKRTRIRKKMLIEQTYKVIQRLEA 298
                  2244455555566666666667777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1082  (0.0791398); expected 273.4 (0.02)
Passed bias filter:                      512  (0.0374488); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.34s 00:00:01.12 Elapsed: 00:00:00.64
# Mc/sec: 1434.07
//
Query:       MMETSP1325-20131115|11965_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.4   0.0       0.16   10.9   0.0    1.2  1  PF11510.3 Fanconi Anaemia group E protein FANCE


Domain annotation for each model (and alignments):
>> PF11510.3  Fanconi Anaemia group E protein FANCE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.2e-05      0.16      33      82 ..       8      63 ..       2      81 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 1.2e-05
    PF11510.3 33 ledasvvel.kllhecdps.evellcavlqlselselg....llrlcscllklapd 82
                 ++d s+ e+  +  e dp+ +ve+lc vlql++ ++ +    l  +c + l ++ +
  MMETSP1325-20131115|11965_1  8 WKDLSPEEMaSVTAEADPTaKVEMLCRVLQLNHYADNArsaiLADFCLYNLTFCEE 63
                 77777777626889***9648***********999875333367788777776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 938.15
//
Query:       MMETSP1325-20131115|11967_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       502  (0.0367174); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.59
# Mc/sec: 584.87
//
Query:       MMETSP1325-20131115|11976_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.45s 00:00:00.95 Elapsed: 00:00:00.99
# Mc/sec: 631.77
//
Query:       MMETSP1325-20131115|11980_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-15   56.9   7.7    2.3e-15   56.6   5.3    1.1  1  PF02466.14 Tim17/Tim22/Tim23/Pmp24 family
  ------ inclusion threshold ------
       0.11   12.2   0.2       0.14   11.8   0.1    1.1  1  PF01034.15 Syndecan domain


Domain annotation for each model (and alignments):
>> PF02466.14  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   5.3   3.4e-19   2.3e-15       3     123 ..      24     148 ..      22     154 .. 0.88

  Alignments for each domain:
  == domain 1    score: 56.6 bits;  conditional E-value: 3.4e-19
   PF02466.14   3 lektvlagvagfalGavyGlfmrsmhaatklfrslplkeqlkavlramkqrspssaknfavvgaiYsgiecaleglr.gk....ndllnsvaAGaltGavlarrggpqaaavgaagfaafsaaiea 123
                   ek ++ ++ +f+ G v G+++++ ++  +  +s  +k +++avl+ +++ s+ +++ ++vv++ Y ++e++ +++  ++    +  +n+v+AG  tG+++++++ pq+++ ++++++ + +a ++
  MMETSP1325-20131115|11980_1  24 HEKLFFNSGFAFLAGSVAGTLYGATEG-LRGAASNKVKVRVNAVLNGAGKYSAGWGNAMGVVALYYTTVESLASYAElEEyaggDPNVNHVVAGISTGMLYKCTARPQTMVLAGVIGGGLVGASCL 148
                  68999******************8865.55556666899******************************999888764435556********************************9999888665 PP

>> PF01034.15  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   2.1e-05      0.14     269     287 ..     129     147 ..      99     149 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.1e-05
   PF01034.15 269 erkevLaAVIaGGVVGllf 287
                   ++ vLa+VI+GG+VG+ +
  MMETSP1325-20131115|11980_1 129 PQTMVLAGVIGGGLVGASC 147
                  5788************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.30s 00:00:00.71 Elapsed: 00:00:00.87
# Mc/sec: 432.45
//
Query:       MMETSP1325-20131115|11985_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        72  (0.00526624); expected 273.4 (0.02)
Passed bias filter:                       71  (0.0051931); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 306.20
//
Query:       MMETSP1325-20131115|11986_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.41s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 427.92
//
Query:       MMETSP1325-20131115|11996_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.54
# Mc/sec: 443.77
//
Query:       MMETSP1325-20131115|11997_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|11998_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 433.38
//
Query:       MMETSP1325-20131115|11999_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-13   47.5   0.0      1e-12   47.3   0.0    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.0   7.6e-17     1e-12     435     487 ..       9      61 ..       2      62 .. 0.91

  Alignments for each domain:
  == domain 1    score: 47.3 bits;  conditional E-value: 7.6e-17
   PF00118.19 435 kgenlgidaetgeiidlveagilDplkvkrsalksavevasliLtidqiikak 487
                  k+  +g++a t+++++l++agilDp+kv+++al+++v+vasl+Lt+++++++ 
  MMETSP1325-20131115|11999_1   9 KEFGFGYNAATDTYENLLDAGILDPAKVTTNALENSVSVASLVLTTEALVTEI 61 
                  5569*********************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 408.79
//
Query:       MMETSP1325-20131115|12002_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-07   29.1   0.0    4.6e-07   28.9   0.0    1.0  1  PF02089.10 Palmitoyl protein thioesterase


Domain annotation for each model (and alignments):
>> PF02089.10  Palmitoyl protein thioesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   3.3e-11   4.6e-07     118     181 ..       5      69 ..       2      79 .. 0.87

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 3.3e-11
   PF02089.10 118 gvfglprcpgesshicdfirkslnagaysklvqerlvqaeywhdpik..edvyrnysifladinqe 181
                  g  g+p c   s  +c  +     a ay+  vq +l qa+y+ dp k   d y+ ys  la  n+e
  MMETSP1325-20131115|12002_1   5 GTSGFPSCDPASHSLCAAMAEFCGAAAYNSFVQGHLFQADYYRDPEKvdGDAYKTYSQ-LAKWNNE 69 
                  7889*****************************************7622579**9996.6666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 390.00
//
Query:       MMETSP1325-20131115|12008_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.42s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 140.96
//
Query:       MMETSP1325-20131115|12011_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.48
# Mc/sec: 274.58
//
Query:       MMETSP1325-20131115|12014_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|12016_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00057   19.6   2.6       0.25   11.2   0.1    2.1  2  PF02297.12 Cytochrome oxidase c subunit VIb
  ------ inclusion threshold ------
      0.041   13.7   5.7        1.8    8.4   0.3    2.4  2  PF06747.8  CHCH domain
       0.18   11.4   6.1        3.7    7.2   0.5    2.3  2  PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
       0.47   10.4   7.2       0.58   10.1   0.6    2.9  2  PF10203.4  Cytochrome c oxidase assembly protein PET191


Domain annotation for each model (and alignments):
>> PF02297.12  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.1   0.00038       1.3      10      50 ..      28      66 ..      27      71 .. 0.84
   2 !   11.2   0.1   7.3e-05      0.25      14      40 ..      75     101 ..      74     104 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00038
   PF02297.12 10 kaCweardeYfkCldkkgedaneCkaerkeyesnCpkswve 50
                 k C +   +++ C +k++ d ++C  + + +   C+++ v+
  MMETSP1325-20131115|12016_1 28 KDCASVNKAFYIC-KKNNSDPEACLSQGSDVTT-CAHEVVQ 66
                 689999*******.5677899*****9999955.9999886 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 7.3e-05
   PF02297.12  14 eardeYfkCldkkgedaneCkaerkey 40 
                  +a+++Y kC+ k+  +  +C++ ++ +
  MMETSP1325-20131115|12016_1  75 DAYMAYQKCISKNHGELYKCSKMKEAM 101
                  589******************999876 PP

>> PF06747.8  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.4   0.00082       2.8       1      22 [.      30      50 ..      30      64 .. 0.90
   2 ?    8.4   0.3   0.00052       1.8       7      29 ..      79     101 ..      77     103 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00082
                 ---HHHHHHHHHHHH-SS--TT CS
    PF06747.8  1 CgeEfkellsClkensdefskC 22
                 C+   k+++ C k+nsd  ++C
  MMETSP1325-20131115|12016_1 30 CASVNKAFYICKKNNSD-PEAC 50
                 89999************.9999 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.00052
                  HHHHHHHHH-SS--TTHHHHHHH CS
    PF06747.8   7 ellsClkensdefskCrkefeaf 29 
                  ++++C+ +n  e  kC+k  ea+
  MMETSP1325-20131115|12016_1  79 AYQKCISKNHGELYKCSKMKEAM 101
                  89**************9966665 PP

>> PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.4    0.0012       4.2      23      48 ..      30      53 ..      27      66 .. 0.81
   2 ?    7.2   0.5    0.0011       3.7      15      43 ..      75     102 ..      74     103 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0012
    PF08583.5 23 ChkdrtlkavgkCneekeamkkClke 48
                 C+   + ka+  C++ + +  +Cl +
  MMETSP1325-20131115|12016_1 30 CAS--VNKAFYICKKNNSDPEACLSQ 53
                 554..678999999999999999987 PP

  == domain 2    score: 7.2 bits;  conditional E-value: 0.0011
    PF08583.5  15 elikafaeChkdrtlkavgkCneekeamk 43 
                  ++++a+++C   + +  + kC + keam 
  MMETSP1325-20131115|12016_1  75 DAYMAYQKCIS-KNHGELYKCSKMKEAML 102
                  7889*******.5666689********96 PP

>> PF10203.4  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.6   0.00017      0.58      40      61 ..      26      47 ..      20      54 .. 0.85
   2 ?    2.2   0.9     0.049   1.7e+02      28      36 ..      79      87 ..      46     103 .. 0.50

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00017
    PF10203.4 40 lpeeCkalrkafleCkrglldm 61
                 + ++C ++ kaf+ Ck++  d 
  MMETSP1325-20131115|12016_1 26 IGKDCASVNKAFYICKKNNSDP 47
                 5689*************98776 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.049
    PF10203.4 28 spkeClkek 36
                  +++C++++
  MMETSP1325-20131115|12016_1 79 AYQKCISKN 87
                 334444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 552.20
//
Query:       MMETSP1325-20131115|12020_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 508.03
//
Query:       MMETSP1325-20131115|12026_1  [L=358]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.006   17.2   0.3      0.011   16.4   0.2    1.5  1  PF13578.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF13578.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   8.2e-07     0.011       1     106 []     181     309 ..     181     309 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 8.2e-07
    PF13578.1   1 vEiGvysGvstlvllqalkrngagrlysvdpdpg.......aeeaaalaee.......agladrvrllkgds....................eealasladgsiDllfiDgghaaeavladleallprlapggvvlldDy 106
                  +E G  sG st  ++ +++++     ys+++ +         e +a +++         +l d+++++++ +                     +a+++ +++ +D++++Dg      + a+   +l  +   +vv+++D+
  MMETSP1325-20131115|12026_1 181 LEWG--SGGSTNTFALLAEKA-----YSIEHFQPwcsnvklHELVAFHWAIgqlnyicVELPDHLQIMHAGFphchkdredndacseamrpyIDAVHHTQEQHFDVVLVDGR----YRVAAALKALAFVDTSSVVAVHDW 309
                  6999..*****9999766544.....6677766545455441123333332445566688888899998888888888888888888887778888888899*********6....344445678889999*******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.37s 00:00:01.02 Elapsed: 00:00:00.59
# Mc/sec: 1454.06
//
Query:       MMETSP1325-20131115|12030_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      188  (0.0137507); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 343.01
//
Query:       MMETSP1325-20131115|12031_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.8e-84  282.0   0.2    5.4e-84  281.8   0.1    1.0  1  PF03630.9 Fumble


Domain annotation for each model (and alignments):
>> PF03630.9  Fumble
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.8   0.1   3.9e-88   5.4e-84     148     332 ..       2     186 ..       1     188 [. 0.99

  Alignments for each domain:
  == domain 1    score: 281.8 bits;  conditional E-value: 3.9e-88
                  --SEEEEEE----EEEEEEETTEEEEEE------------HHHH----SHHHHHHHHH---GGGTSEEHHHH-----TT-------EEE----TTSHHHH.HH--HHHHHHHHHHHHHHH---HHHHHHHHHT---EEEE-ETTSSSSHHHHHHHHHHHHHT-----EEEETT------------ CS
    PF03630.9 148 lypyllvNigsGvSilkvegedqfkrvgGsslGGGtflGLlsLltgaksfdellelaqkGdnsevDmlvrdiYggdyeklglkgsliAssfgkvleeekeleefkkediaksllvaisnnigqiayllaekekvkriyfgGsfirnnaltmktlsyainfwskgelkalflrhegylgalGalle 332
                   +pyllv igsGvSi++v+ +  ++rv+Gss+GGGtf+GL +Lltg++s++e+l la+kGd ++ Dm+v+diYg +y+k+gl+++++Assfgk ++e++ + + ++ed+++sll++ +nnigq+a l+a+kek  riyf+G+f+r n+++ + lsyai++ws+g ++alfl+hegy+galGa++ 
  MMETSP1325-20131115|12031_1   2 SFPYLLVSIGSGVSIIRVDAPGVYERVSGSSIGGGTFFGLARLLTGCSSYEEALALAEKGDATKCDMMVGDIYGRNYSKIGLSSDAVASSFGKLMSEKDPQGTSRPEDLVRSLLLMTTNNIGQVALLNAQKEKCARIYFVGNFLRSNEISCRRLSYAIDYWSEGVMEALFLEHEGYFGALGAFML 186
                  59**************************************************************************************************9**********************************************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 948.96
//
Query:       MMETSP1325-20131115|12033_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-09   34.4   0.2    1.6e-08   33.7   0.1    1.4  1  PF02037.22 SAP domain


Domain annotation for each model (and alignments):
>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.1   1.2e-12   1.6e-08       1      29 [.     119     147 .]     119     147 .] 0.95

  Alignments for each domain:
  == domain 1    score: 33.7 bits;  conditional E-value: 1.2e-12
                  HTT--HHHHHHHHHHTT------HHHHHH CS
   PF02037.22   1 lskltVaeLKaeLkkrGLptsGkKaeLie 29 
                  + +++ +eL+ae+k++GL+ +GkK +Li+
  MMETSP1325-20131115|12033_1 119 FGSMKYKELQAECKRLGLKANGKKDVLIA 147
                  579************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.31s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 629.04
//
Query:       MMETSP1325-20131115|12039_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.22   10.8   2.3       0.25   10.6   1.6    1.2  1  PF01580.13 FtsK/SpoIIIE family
        1.7    8.1   4.0        2.2    7.8   2.8    1.2  1  PF10107.4  Endonuclease related to archaeal Holliday junction resolvase
        1.8    8.3   7.2        2.8    7.7   5.0    1.3  1  PF12848.2  ABC transporter


Domain annotation for each model (and alignments):
>> PF01580.13  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.6   5.5e-05      0.25      95     123 ..      17      47 ..       2     107 .. 0.76

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 5.5e-05
   PF01580.13  95 vavatdpekalraleelvaemeeRy..allk 123
                   a a++++ a+ral++ va+meeR+  + l+
  MMETSP1325-20131115|12039_1  17 EAEARQKQAAMRALQKWVAQMEERAreEALS 47 
                  37799*******************9654444 PP

>> PF10107.4  Endonuclease related to archaeal Holliday junction resolvase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.8   0.00047       2.2      24      71 ..       5      50 ..       1      61 [. 0.76

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00047
    PF10107.4 24 arelfeqlkkaereeleaqveeeaeakleewkkkeekeirkdavkksr 71
                  +e++eq+  ++++e ea+ ++ a  +l++w +++e+++r++a + s+
  MMETSP1325-20131115|12039_1  5 FEEVVEQV--DTQREAEARQKQAAMRALQKWVAQMEERAREEALSLSH 50
                 55666666..44456677888888889****************98776 PP

>> PF12848.2  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.0   0.00061       2.8      18      68 ..       5      55 ..       3      66 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.00061
    PF12848.2 18 yleqkeerleqqekayekqqkeikkleefIdrfrakaskakqaqsrekale 68
                 + e  e+   q+e++ +++q+ ++ l+++++++ ++a+  + + s  +al 
  MMETSP1325-20131115|12039_1  5 FEEVVEQVDTQREAEARQKQAAMRALQKWVAQMEERAREEALSLSHLRALR 55
                 77888888999999*********************9987777777666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1409  (0.103057); expected 273.4 (0.02)
Passed bias filter:                      962  (0.0703628); expected 273.4 (0.02)
Passed Vit filter:                       113  (0.00826507); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.45s 00:00:01.01 Elapsed: 00:00:00.78
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|12043_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.55
# Mc/sec: 945.47
//
Query:       MMETSP1325-20131115|12049_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.60
# Mc/sec: 946.56
//
Query:       MMETSP1325-20131115|12054_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-09   35.5   9.4    0.00083   18.6   0.6    4.7  5  PF00132.19 Bacterial transferase hexapeptide (six repeats)


Domain annotation for each model (and alignments):
>> PF00132.19  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   1.4e-06     0.019       2      36 .]      58      92 ..      57      92 .. 0.94
   2 !    2.2   0.0    0.0096   1.3e+02       8      27 ..      97     110 ..      94     112 .. 0.51
   3 !    3.5   0.1    0.0037        51      20      32 ..     125     137 ..     119     141 .. 0.63
   4 !   18.6   0.6   6.1e-08   0.00083       2      34 ..     131     162 ..     130     164 .. 0.82
   5 ?    0.7   0.0     0.027   3.7e+02       4      17 ..     162     175 ..     159     178 .. 0.55

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.4e-06
                 EEE-TTEEE-TTEEEESSEBE-TTEEE-TTEEEES CS
   PF00132.19  2 tvIGenvlIgpnvvigggviIGdnviIgagvvigg 36
                 + I ++v++ p ++++g v+I  ++ ++ ++vi+g
  MMETSP1325-20131115|12054_1 58 PMIQPDVFVAPTATVVGEVEINFGASVWYNAVIRG 92
                 67999****************************97 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.0096
                  EEE-TTEEEESSEBE-TTEE CS
   PF00132.19   8 vlIgpnvvigggviIGdnvi 27 
                  v      ++g+ + +Gd+v 
  MMETSP1325-20131115|12054_1  97 V------KVGAKASVGDRVS 110
                  4......4455555555544 PP

  == domain 3    score: 3.5 bits;  conditional E-value: 0.0037
                  EBE-TTEEE-TTE CS
   PF00132.19  20 viIGdnviIgagv 32 
                  + IG ++iIgag+
  MMETSP1325-20131115|12054_1 125 CDIGYDAIIGAGS 137
                  4455556666655 PP

  == domain 4    score: 18.6 bits;  conditional E-value: 6.1e-08
                  EEE-TTEEE-TTEEEESSEBE-TTEEE-TTEEE CS
   PF00132.19   2 tvIGenvlIgpnvvigggviIGdnviIgagvvi 34 
                  ++IG ++ + + +v ++g++IG+n+++ +g+ +
  MMETSP1325-20131115|12054_1 131 AIIGAGSSLVSCTV-MPGATIGENCVVLEGALV 162
                  67777777777777.************999987 PP

  == domain 5    score: 0.7 bits;  conditional E-value: 0.027
                  E-TTEEE-TTEEEE CS
   PF00132.19   4 IGenvlIgpnvvig 17 
                  ++  +++ p++v+ 
  MMETSP1325-20131115|12054_1 162 VEAKATVLPGSVVP 175
                  45555666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      158  (0.0115565); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 1090.11
//
Query:       MMETSP1325-20131115|12056_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.3e-13   48.0   0.1    1.1e-12   47.4   0.1    1.3  1  PF10276.4 Zinc-finger domain


Domain annotation for each model (and alignments):
>> PF10276.4  Zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.1   8.3e-17   1.1e-12       4      40 .]      71     112 ..      68     112 .. 0.90

  Alignments for each domain:
  == domain 1    score: 47.4 bits;  conditional E-value: 8.3e-17
                  EEEE-----------EEEE--TT--.....-EE----S-EEE CS
    PF10276.4   4 rvsCdGgegalgHPrvYlklddesg.....pakCkYCglrFv 40 
                   + C Gg+galgHP  Y++l++  +     +++CkYCglrF+
  MMETSP1325-20131115|12056_1  71 TAVCNGGGGALGHPIEYIQLNTARDgknpmVEICKYCGLRFI 112
                  578******************98778899999*********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 567.30
//
Query:       MMETSP1325-20131115|12057_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-50  170.2   0.0    4.5e-50  169.8   0.0    1.0  1  PF03982.8 Diacylglycerol acyltransferase


Domain annotation for each model (and alignments):
>> PF03982.8  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.8   0.0   3.3e-54   4.5e-50      86     287 ..       7     199 ..       4     206 .. 0.95

  Alignments for each domain:
  == domain 1    score: 169.8 bits;  conditional E-value: 3.3e-54
    PF03982.8  86 datgvkekfpgirfnlatLagqfrtpfrreillllGlievsresieyvLdkeekGravvlvvGGaeealeahpgketltLkkrkGfvkialktGadLvPvysfGendvykqvenpkgsklrkvqeklkkvlglsppilyGrglfnsltlGllPfrkpittvvGkPievtkteePtkeeidelhakYveaLaeLfeehkekfg 287
                  ++ g+ + fpgi   +atL+  f +pf  e+ll + ++ ++   ++ +L+    Gr++ l++GGa+eal++hp+   l +k+rkGfv+ial t a+LvP+  fGen++++ v+np+gs+ r +q+   k +g+s p++     f      ++  rkp+t+v G P++++k+ eP++e +d  h+kY+e+L+ Lfe h+   g
  MMETSP1325-20131115|12057_1   7 NGPGFGDLFPGIFASVATLNIVFAVPFWHEWLLAHSFVSANASCLKRILTTP--GRSLCLIPGGAAEALNSHPNSMRLHIKNRKGFVRIALMTSASLVPTIGFGENELFECVQNPEGSWTRAIQTLGMKWFGFSIPLFKT---FM----PVVDPRKPLTVVFGSPMHMEKVAEPSQELVDITHQKYLEKLKALFESHRVEAG 199
                  677999*******************************************875..77*********************************************************************************988...66....47999*******************************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      307  (0.0224547); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 874.46
//
Query:       MMETSP1325-20131115|12063_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       571  (0.0417642); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.80
# Mc/sec: 437.34
//
Query:       MMETSP1325-20131115|12073_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00084   18.1   0.0    0.00084   18.1   0.0    1.0  1  PF03222.8  Tryptophan/tyrosine permease family
  ------ inclusion threshold ------
       0.08   12.4   0.4       0.33   10.4   0.3    1.9  2  PF03681.10 Uncharacterised protein family (UPF0150)


Domain annotation for each model (and alignments):
>> PF03222.8  Tryptophan/tyrosine permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.2e-07   0.00084     339     366 ..       2      30 ..       1      44 [. 0.89

  Alignments for each domain:
  == domain 1    score: 18.1 bits;  conditional E-value: 1.2e-07
    PF03222.8 339 algyAG.laatilavilPallawkarkkk 366
                  al++AG +++ +l++++P+++aw +r+  
  MMETSP1325-20131115|12073_1   2 ALEFAGsFGNLVLFGLIPVAMAWSQREAL 30 
                  9*************************875 PP

>> PF03681.10  Uncharacterised protein family (UPF0150)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0     0.099   6.8e+02      32      39 ..      27      34 ..      23      36 .. 0.69
   2 ?   10.4   0.3   4.8e-05      0.33      23      40 ..      37      54 ..      28      55 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.099
                 HHHHHHHH CS
   PF03681.10 32 eEAlanak 39
                  EAl+ a+
  MMETSP1325-20131115|12073_1 27 REALEGAE 34
                 57777776 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 4.8e-05
                 GG-B----HHHHHHHHHH CS
   PF03681.10 23 gcvtqGeTleEAlanakE 40
                 g+ t G+T + A an++ 
  MMETSP1325-20131115|12073_1 37 GVYTTGDTEAQAHANVRA 54
                 899************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 235.50
//
Query:       MMETSP1325-20131115|12079_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-24   85.4   1.0    1.2e-24   85.2   0.7    1.1  1  PF00240.18 Ubiquitin family
    6.2e-15   54.5   0.5      7e-15   54.3   0.3    1.0  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
    5.5e-07   29.2   0.1    1.2e-06   28.1   0.1    1.5  1  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
    0.00034   20.6   0.0    0.00047   20.1   0.0    1.3  1  PF10302.4  DUF2407 ubiquitin-like domain
  ------ inclusion threshold ------
      0.044   13.4   0.1       0.06   13.0   0.1    1.2  1  PF07288.6  Protein of unknown function (DUF1447)


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.7   4.5e-28   1.2e-24       1      69 []      29      97 .]      29      97 .] 0.98

  Alignments for each domain:
  == domain 1    score: 85.2 bits;  conditional E-value: 4.5e-28
                 EESSSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
   PF00240.18  1 ktlsgktitlevepsdtvselKekieekegipvdqqrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69
                 ktl+g++ ++ +e+sdtv+++K++++ekegi vdq+rLiy+Gk+L D++ l++y+i++gst+h+vl+lr
  MMETSP1325-20131115|12079_1 29 KTLTGRKQSFNFEESDTVQSVKQALQEKEGIQVDQIRLIYAGKQLADEKELESYQITPGSTIHMVLQLR 97
                 89999999**********************************************************986 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.3   2.6e-18     7e-15       1      72 []      24      94 ..      24      94 .. 0.98

  Alignments for each domain:
  == domain 1    score: 54.3 bits;  conditional E-value: 2.6e-18
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEE----B--TTSBGGGSS--TTEEEEEE- CS
    PF11976.3  1 ikivlkgkdgkevkikVkpdttlskLieayrkkkgipeeeqvrLiFDGerLdpndtvedldiedgdtidvvi 72
                 ++i +k+ +g + +++ ++++t++ +++a+++k+gi+  +q+rLi+ G++L +++ +e+++i+ g+ti++v+
  MMETSP1325-20131115|12079_1 24 MQIYIKTLTGRKQSFNFEESDTVQSVKQALQEKEGIQV-DQIRLIYAGKQLADEKELESYQITPGSTIHMVL 94
                 89************************************.******************************996 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.1   4.5e-10   1.2e-06       7      87 ..      28      94 ..      23      97 .] 0.83

  Alignments for each domain:
  == domain 1    score: 28.1 bits;  conditional E-value: 4.5e-10
                 EEE----EE-EEEE-TT-BHHHHHHHHHHHS-TT------SGGGEEEE----B--TTSBGGGGS--TTS-----EEEEEEE CS
    PF13881.1  7 frlvdGkDigpfkfseattvaelkekvlaeWpkekeskpksandlklilaGkiLednktLkelrlplgevkggvtvmHvvv 87
                 + +  G   + f+f+e++tv+++k+++      eke    ++++++li+aGk L d+k L++++++ g +      +H+v+
  MMETSP1325-20131115|12079_1 28 IKTLTGR-KQSFNFEESDTVQSVKQALQ-----EKE--GIQVDQIRLIYAGKQLADEKELESYQITPGST------IHMVL 94
                 4555677.7899**************94.....444..478999*********************99988......66665 PP

>> PF10302.4  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.7e-07   0.00047      21      65 ..      41      83 ..      22      91 .. 0.84

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.7e-07
    PF10302.4 21 pnsltvaeLkrliRerlpgdlsrrrLrlIyaGkvLndesalasdl 65
                  +s tv++ k+  +e+     +  ++rlIyaGk L+de++l+s  
  MMETSP1325-20131115|12079_1 41 EESDTVQSVKQALQEKE--GIQVDQIRLIYAGKQLADEKELESYQ 83
                 37899999999999998..788899***************99865 PP

>> PF07288.6  Protein of unknown function (DUF1447)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   2.2e-05      0.06      24      67 ..      28      85 ..      21      86 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.2e-05
    PF07288.6 24 l.............eaesevevrklveenteyniEfieel.egkhLeYEkesedfklt 67
                 +             e ++ ++v++ ++e++ + ++ i+ +  gk L+ Eke e +++t
  MMETSP1325-20131115|12079_1 28 IktltgrkqsfnfeESDTVQSVKQALQEKEGIQVDQIRLIyAGKQLADEKELESYQIT 85
                 555555555555558899999*****************99569************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       660  (0.0482738); expected 273.4 (0.02)
Passed bias filter:                      565  (0.0413253); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 430.46
//
Query:       MMETSP1325-20131115|12086_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 304.15
//
Query:       MMETSP1325-20131115|12088_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-12   46.3   3.5    3.8e-12   45.6   2.4    1.4  1  PF05739.14 SNARE domain
     0.0035   15.5   0.5     0.0045   15.1   0.4    1.1  1  PF07902.6  gp58-like protein
  ------ inclusion threshold ------
      0.019   14.7   1.2      0.034   13.8   0.7    1.5  1  PF06009.7  Laminin Domain II
      0.026   13.9   0.1      0.035   13.5   0.0    1.1  1  PF01610.12 Transposase
      0.097   12.0   0.3      0.097   12.0   0.2    2.0  2  PF11657.3  Transcriptional activator TraM
      0.099   12.7   0.3       0.15   12.1   0.2    1.3  1  PF01519.11 Protein of unknown function DUF16
       0.11   12.0   6.9       0.17   11.5   4.8    1.2  1  PF12325.3  TATA element modulatory factor 1 TATA binding
       0.13   11.9   0.1        0.2   11.4   0.0    1.2  1  PF06271.7  RDD family
       0.19   11.4   5.0       0.27   10.9   3.4    1.1  1  PF09744.4  JNK_SAPK-associated protein-1
       0.34    9.0   1.7       0.47    8.6   1.2    1.2  1  PF06638.6  Strabismus protein
       0.68    9.6   3.6          2    8.1   2.2    1.9  1  PF07889.7  Protein of unknown function (DUF1664)
        6.9    5.1  12.4        1.5    7.3   0.2    2.2  3  PF05055.7  Protein of unknown function (DUF677)


Domain annotation for each model (and alignments):
>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   2.4   3.3e-15   3.8e-12       2      63 .]      95     156 ..      94     156 .. 0.98

  Alignments for each domain:
  == domain 1    score: 45.6 bits;  conditional E-value: 3.3e-15
                  HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   PF05739.14   2 rdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalryqk 63 
                  rd+++++l++++  ++++f d+ e v eQ e +d+ +++v+ a+sr e++ k+l  a+++q+
  MMETSP1325-20131115|12088_1  95 RDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAVDQVEEDVDAAHSRAESGIKQLHGAVKKQR 156
                  9**********************************************************997 PP

>> PF07902.6  gp58-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.4   3.9e-06    0.0045     240     326 ..      71     155 ..      47     164 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 3.9e-06
    PF07902.6 240 eleskisGLrstqqstakqisqeiknregavsrvqqdldsyqrrlqdaednyssltqTvkGlqsevsdpnskiesrvtqLaslieqk 326
                   l skis +r    +  +  ++e+++r +a+ r++qd+        d  + + + ++ v  ++++v + +s++es + qL++ ++++
  MMETSP1325-20131115|12088_1  71 ALLSKISNVRY--ITEEELMDEEMRARDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAVDQVEEDVDAAHSRAESGIKQLHGAVKKQ 155
                  45577777554..45567899***********************************************************9988764 PP

>> PF06009.7  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.7     3e-05     0.034      20      81 ..      86     148 ..      67     160 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3e-05
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX CS
    PF06009.7  20 egistnventkaklsklngsveetnekvksankavrdarrsvrkleklapqlldkLkk.lkkl 81 
                  e +++++ +  + +++ln++v++++e+ ++  ++v + +++v ++e+ ++   ++ ++ +k+l
  MMETSP1325-20131115|12088_1  86 ELMDEEMRARDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAVDQVEEDVDAAHSRAESgIKQL 148
                  348889999999999**************9999999999999999999998777765435555 PP

>> PF01610.12  Transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     3e-05     0.035     113     197 ..      68     153 ..      44     158 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3e-05
   PF01610.12 113 eerkllkksrwlllknpenltekqkkrldell.eqspelkeaYelkeelrqiy.kkkedkeeakkllkewiekakesrlepfkklak 197
                  +er ll k   +    +e+l +++ ++ d+++ + ++++++ +e+  +lr+i+ +++e+ +++++ +++  ++a es++++++ ++k
  MMETSP1325-20131115|12088_1  68 QERALLSKISNVRYITEEELMDEEMRARDNAMgRLNQDVHKIHEVFSDLREIVgEQQEAVDQVEEDVDAAHSRA-ESGIKQLHGAVK 153
                  44555555544443355555555555547766699******************754557888888888888774.677777665554 PP

>> PF11657.3  Transcriptional activator TraM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1         3   3.4e+03      59      69 ..      22      32 ..      18      34 .. 0.85
   2 ?   12.0   0.2   8.5e-05     0.097      91     142 ..     128     179 ..     119     181 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 3
    PF11657.3 59 asrWgedakek 69
                 as Wg+ ak+k
  MMETSP1325-20131115|12088_1 22 ASSWGRSAKKK 32
                 789******98 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 8.5e-05
    PF11657.3  91 esakaaaeavkkevdaslarlaekvqkarkiallnlvasalallaaalvllv 142
                  +++++ ++a ++  ++ +++l++ v+k r  ++  l+a a+++++a++v ++
  MMETSP1325-20131115|12088_1 128 DQVEEDVDAAHSRAESGIKQLHGAVKKQRAGNRCFLIALATLVFVACVVAIA 179
                  67788999999999**********************************9876 PP

>> PF01519.11  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   0.00013      0.15      18      92 ..      77     150 ..      61     169 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00013
   PF01519.11  18 vktkYVThkqld..eFKdandqrltkiEtkvdqlaqgeqikkltetvekqgeqikelqveqkaqgetlqlilktlek 92 
                   + +Y+T ++l   e   a d+ + ++++ v+++   e  + l e+v  q+e++++ +++++a  ++ ++  k+l+ 
  MMETSP1325-20131115|12088_1  77 SNVRYITEEELMdeEM-RARDNAMGRLNQDVHKI--HEVFSDLREIVGEQQEAVDQVEEDVDAAHSRAESGIKQLHG 150
                  4789******984433.68888888888888844..55567777777778888877777777777666666665554 PP

>> PF12325.3  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   4.8   0.00015      0.17      21     107 ..      52     135 ..      49     149 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00015
    PF12325.3  21 klsstirrlEgElaslkee..larLekerdeareEivklteeneelkekkkeleelekeleeleqryettLellGEksEeveELraDve 107
                   l++++   E+E +s++e+  l+++++ r   +eE+++     ee+++ ++++ +l++ ++++ +  +++ e+ GE++E v+  + Dv 
  MMETSP1325-20131115|12088_1  52 DLEASLLDHESENVSSQERalLSKISNVRYITEEELMD-----EEMRARDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAVDQVEEDVD 135
                  57777778888888888764468888888888888765.....899*****************************************96 PP

>> PF06271.7  RDD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018       0.2      42      93 ..     158     209 ..     144     214 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00018
    PF06271.7  42 kallllillllllllvlllyivlllskkgqTlGkrllglkvvdedgeklslk 93 
                   +  +li+l++l+++++++ i + ++   + +G++++ l+v   ++++ls  
  MMETSP1325-20131115|12088_1 158 GNRCFLIALATLVFVACVVAIAVAVGXALAVPGQKMTSLRVSGGETTRLSAS 209
                  566789999********************************99888888765 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   3.4   0.00023      0.27      46     155 ..      49     156 ..      44     158 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00023
    PF09744.4  46 qelelelelleedkerLskqyerekelrkqaeekllelEdeleqekkelekkieeleeevrqlelkaknlsdkvsrLeeretelkkeyeslheretkllkeyveyverqk 155
                  ++++le+ ll ++ e++s q +    l k ++ +++  E+ + +e +  ++ + +l++ v ++    ++l + v + +e  +++ ++ ++ h r    +k++   v +q+
  MMETSP1325-20131115|12088_1  49 DNNDLEASLLDHESENVSSQERAL--LSKISNVRYITEEELMDEEMRARDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAVDQVEEDVDAAHSRAESGIKQLHGAVKKQR 156
                  578***************997765..778999999*999***************************************************************99999998 PP

>> PF06638.6  Strabismus protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.2   0.00041      0.47     297     370 ..      58     131 ..      45     157 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00041
    PF06638.6 297 vdgaesqsesqsrallaaaarrrdsshnelyyeeaeyerrvrkRkaRLvvaveeafthikrlkeedeekkpaee 370
                  +d ++++ +sq rall+  +  r  + +el+ ee+        R  + v  ++e f+ ++ +  e++e+  + e
  MMETSP1325-20131115|12088_1  58 LDHESENVSSQERALLSKISNVRYITEEELMDEEMRARDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAVDQVE 131
                  577888999****************************9999*********************988885544333 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.2    0.0018         2      52     119 ..      58     134 ..      52     141 .. 0.69

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0018
    PF07889.7  52 lekvseavasakkhLsqridn.........lddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLeskl 119
                  l++ se+v s  + L ++i n         +d+++ +  + + + +++v++i+e  s+++e v + +++v ++e+ +
  MMETSP1325-20131115|12088_1  58 LDHESENVSSQERALLSKISNvryiteeelMDEEMRARDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAVDQVEEDV 134
                  77778888888888888886622222222257777777777788888888888888888887777777777777665 PP

>> PF05055.7  Protein of unknown function (DUF677)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.5     0.021        24     259     325 ..      62     127 ..      52     137 .. 0.72
   2 ?    7.3   0.2    0.0013       1.5     235     288 ..     103     156 ..      80     161 .. 0.89
   3 ?    4.8   3.5    0.0076       8.6     176     221 ..     152     197 ..     145     212 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.3 bits;  conditional E-value: 0.021
    PF05055.7 259 venisilverleseiksilktvefAvekeeneaavklaleeikkkvekltekieevgeeaakcskli 325
                   en+s++ ++l s+i+++    e+   +ee   a   a+  ++++v+k+ e   ++ e +++  + +
  MMETSP1325-20131115|12088_1  62 SENVSSQERALLSKISNVRYITEEELMDEE-MRARDNAMGRLNQDVHKIHEVFSDLREIVGEQQEAV 127
                  577888888888888888777777776655.566677888888888888888888777776665554 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0013
    PF05055.7 235 eealkrqkeivssmekgievakkdvenisilverleseiksilktvefAvekee 288
                  ++ +++ +e+ s++++ +  ++++v++++ +v++ +s+ +s +k+   Av+k+ 
  MMETSP1325-20131115|12088_1 103 NQDVHKIHEVFSDLREIVGEQQEAVDQVEEDVDAAHSRAESGIKQLHGAVKKQR 156
                  567899999****************************************99975 PP

  == domain 3    score: 4.8 bits;  conditional E-value: 0.0076
    PF05055.7 176 iktkraisnvvfvaafvaVlvlSvvlaalaapavvavagalavPle 221
                  +k++ra    +++a    V+v+ vv++a+a++ ++av g   + l 
  MMETSP1325-20131115|12088_1 152 VKKQRAGNRCFLIALATLVFVACVVAIAVAVGXALAVPGQKMTSLR 197
                  77888877778888888899***************99887766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1024  (0.0748976); expected 273.4 (0.02)
Passed bias filter:                      721  (0.0527355); expected 273.4 (0.02)
Passed Vit filter:                        93  (0.00680222); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.70u 0.40s 00:00:01.10 Elapsed: 00:00:00.60
# Mc/sec: 966.53
//
Query:       MMETSP1325-20131115|12089_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       101  (0.00738736); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 206.74
//
Query:       MMETSP1325-20131115|12091_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-07   30.1   0.0    3.4e-07   29.4   0.0    1.3  1  PF01167.13 Tub family


Domain annotation for each model (and alignments):
>> PF01167.13  Tub family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   2.5e-11   3.4e-07     169     243 ..      35     179 ..      27     182 .. 0.89

  Alignments for each domain:
  == domain 1    score: 29.4 bits;  conditional E-value: 2.5e-11
   PF01167.13 169 lvLknkaPrWneelqsyvLnfr..Grvtvasvknfqlvaa....................................................................sepdkivlqfGkvakdvftmDyryPlsalqafaicls 243
                  +++k k  r ++++++++L f+    + + s kn  +va+                                                                    +   k vlq Gk++ d f      P+s++qafai+l 
  MMETSP1325-20131115|12091_1  35 VLIKSKIARMSSQQGCHTLEFEwpSGIQEPSRKNLAFVAEhhnmespqalrkgaahdaqattiasdgggslggavrshvrsrstgdpgvtllvdgndgsarqhnsieaDRLSKSVLQLGKLSGDEFSCSVLAPISPFQAFAIALC 179
                  667889999999999999999743568889999999999999999999999999999999999999999999999999999999999999999999999999999888888999*****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.31s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 953.33
//
Query:       MMETSP1325-20131115|12097_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 708.92
//
Query:       MMETSP1325-20131115|12098_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-21   76.8   0.0    2.2e-21   76.1   0.0    1.4  1  PF13426.1  PAS domain
    1.1e-05   25.2   0.0    1.9e-05   24.5   0.0    1.4  1  PF08448.5  PAS fold
    0.00017   21.2   0.0    0.00036   20.1   0.0    1.5  1  PF00989.19 PAS fold
     0.0014   18.5   0.0     0.0034   17.3   0.0    1.7  1  PF08447.6  PAS fold
  ------ inclusion threshold ------
      0.042   13.6   0.0        0.1   12.3   0.0    1.8  2  PF13188.1  PAS domain


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.1   0.0   7.9e-25   2.2e-21       8      99 ..      79     173 ..      72     177 .. 0.93

  Alignments for each domain:
  == domain 1    score: 76.1 bits;  conditional E-value: 7.9e-25
    PF13426.1   8 dpd...gtilfaNeaalrllGytreevlgksirdlfpededeeavalleraleaggevevelelrrkdgeefpvevtvtpvrdedgevvgiivil 99 
                  dp+   ++i+++++ +l+l+Gy  ++vlg+++r+l+++++d++av+ +++ ++ag++ ++ l +++ dg++f++++ v+++rde g++v+ ++++
  MMETSP1325-20131115|12098_1  79 DPSlpdNPIVYVSQGFLKLTGYELDDVLGRNCRFLQGPGTDPRAVEVIRQGVAAGRDTSICLLNYKADGTPFWNQFFVAALRDESGAIVNHVGVQ 173
                  555555***********************************************************************************999875 PP

>> PF08448.5  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   6.9e-09   1.9e-05       4     101 ..      71     172 ..      68     180 .. 0.85

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 6.9e-09
    PF08448.5   4 lpdalavldp...dgrvlyaNaaaaelfgappeellGktlaellpee..daarleralrrvlegeepiefleelllpgeerhyelrllPlrdesGevigvlvi 101
                  +++++av dp   d  ++y+++ + +l g++ +++lG+ ++ +l  +  d +++e + + v++g+++ + l  ++ +g + + ++++  lrdesG ++ ++++
  MMETSP1325-20131115|12098_1  71 SQQCFAVSDPslpDNPIVYVSQGFLKLTGYELDDVLGRNCR-FLQGPgtDPRAVEVIRQGVAAGRDTSICLLNYKADGTPFWNQFFVAALRDESGAIVNHVGV 172
                  66777777642226679************************.4444457**********************************************98777665 PP

>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.3e-07   0.00036      21     104 ..      85     167 ..      65     176 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 1.3e-07
                  --EEEETHHHHHHH-S-HHHHS---CCHHCSCCHCCTCCHHHHHHHHHH--ECEEEEECCS.SSSSEEEEEEEEEECS-S-E-. CS
   PF00989.19  21 grilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfklrdgrpihlevraspvrdaggeil 104
                    i+yv++ + +l+G++ ++vlg++   l  + +d   +e ++q  ++g++ ++   + k  dg+p++ +  ++ +rd++g i 
  MMETSP1325-20131115|12098_1  85 NPIVYVSQGFLKLTGYELDDVLGRNCRFLQGPGTDPRAVEVIRQGVAAGRDTSICLLNYKA-DGTPFWNQFFVAALRDESGAIV 167
                  569***********************9777666655899******************9**9.******************9876 PP

>> PF08447.6  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.2e-06    0.0034       1      90 [.      87     172 ..      87     173 .. 0.94

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 1.2e-06
    PF08447.6   1 iiyvsprveeilGyspeel.gkssyedwldlvhpeDrervrealeelllkkgevysfeyRirrkdGeyrWveargrvirdengkpvrvigv 90 
                  i+yvs+ + +++Gy+ +++ g++    ++ l  p   +r+ e +++   + g+  s+   + ++dG+  W +    ++rde+g +v  +gv
  MMETSP1325-20131115|12098_1  87 IVYVSQGFLKLTGYELDDVlGRN----CRFLQGPGTDPRAVEVIRQ-GVAAGRDTSICLLNYKADGTPFWNQFFVAALRDESGAIVNHVGV 172
                  68*****************8888....999999*************.8888888999999999**********************999987 PP

>> PF13188.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.7e-05       0.1       9      46 ..      70     113 ..      53     135 .. 0.70
   2 ?   -2.1   0.0       1.4   3.8e+03      24      31 ..     150     157 ..     121     170 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.7e-05
    PF13188.1   9 sspdgiivvd.....gdrilevNpaalrllGys...llgellgdll 46 
                  ss+  ++v d     +  i++v + +l+l+Gy+   +lg++++ +l
  MMETSP1325-20131115|12098_1  70 SSQQCFAVSDpslpdNP-IVYVSQGFLKLTGYElddVLGRNCR-FL 113
                  56667777555443335.**************97777777664.33 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.4
    PF13188.1  24 evNpaalr 31 
                  ++N+ +  
  MMETSP1325-20131115|12098_1 150 FWNQFFVA 157
                  46666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|12104_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   17.9   3.3       0.47   10.0   0.3    2.1  2  PF12799.2  Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.012   15.4   1.1        2.5    8.3   0.1    2.4  2  PF00560.28 Leucine Rich Repeat
      0.038   13.8   1.4        1.1    9.1   0.1    2.6  2  PF05725.7  FNIP Repeat
        0.7   10.0   5.6        6.3    7.0   0.1    3.1  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.1   0.00031       1.1       2      23 ..       4      25 ..       3      26 .. 0.71
   2 !   10.0   0.3   0.00014      0.47       3      23 ..      27      52 ..      27      54 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00031
    PF12799.2  2 nLevLdLsnNnIk.dlppelanL 23
                 + + L+L+++nI+ +++  l+ +
  MMETSP1325-20131115|12104_1  4 SVTNLNLARTNIEgNIES-LKDM 25
                 567788888888877877.7765 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00014
    PF12799.2  3 LevLdLsnN.....nIkdlppelanL 23
                 L++L L+++     nIkdlp ++  L
  MMETSP1325-20131115|12104_1 27 LTSLILRDCtkltgNIKDLPQSITDL 52
                 899******999999*****999877 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.004        14       2      20 ..       5      23 ..       4      25 .. 0.83
   2 ?    8.3   0.1   0.00073       2.5       2      17 ..      27      47 ..      26      52 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.004
                 ESEEEETSSBCB.CHHHHHH CS
   PF00560.28  2 LeeLdLsgNnlt.slppsls 20
                  + L+L ++n++ ++ + l+
  MMETSP1325-20131115|12104_1  5 VTNLNLARTNIEgNIES-LK 23
                 678*********99988.66 PP

  == domain 2    score: 8.3 bits;  conditional E-value: 0.00073
                 ESEEEETSS.BCB.C...HHH CS
   PF00560.28  2 LeeLdLsgN.nlt.s...lpp 17
                 L++L L+++ +lt +   lp 
  MMETSP1325-20131115|12104_1 27 LTSLILRDCtKLTgNikdLPQ 47
                 899**********88555555 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.022        74      11      20 ..       2      11 ..       2      22 .. 0.70
   2 ?    9.1   0.1   0.00033       1.1      14      41 ..      27      54 ..      25      55 .. 0.80

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.022
    PF05725.7 11 PsnleiLilg 20
                 P+++++L+l 
  MMETSP1325-20131115|12104_1  2 PKSVTNLNLA 11
                 7788888884 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00033
    PF05725.7 14 leiLilgrdFnqkil.igsLPnSlkeLyF 41
                 l++Lil rd+ +    i  LP+S++ L++
  MMETSP1325-20131115|12104_1 27 LTSLIL-RDCTKLTGnIKDLPQSITDLNL 54
                 899999.9999554479999999999876 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1    0.0019       6.3       2      16 ..       3      17 ..       3      25 .. 0.82
   2 ?    3.9   0.1     0.019        66       4      15 ..      27      39 ..      26      47 .. 0.77
   3 ?    0.9   0.1      0.17   5.9e+02       2       9 ..      47      54 ..      40      55 .. 0.86

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0019
    PF13516.1  2 knLtsLdLsnNqigd 16
                 k+ t+L+L +++i +
  MMETSP1325-20131115|12104_1  3 KSVTNLNLARTNIEG 17
                 5789********976 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.019
    PF13516.1  4 LtsLdLsnNq.ig 15
                 LtsL L ++  ++
  MMETSP1325-20131115|12104_1 27 LTSLILRDCTkLT 39
                 89****9985355 PP

  == domain 3    score: 0.9 bits;  conditional E-value: 0.17
    PF13516.1  2 knLtsLdL 9 
                 +++t+L+L
  MMETSP1325-20131115|12104_1 47 QSITDLNL 54
                 57999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|12110_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.062   13.3   0.0      0.062   13.3   0.0    1.0  1  PF09828.4 Chromate resistance exported protein


Domain annotation for each model (and alignments):
>> PF09828.4  Chromate resistance exported protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.6e-06     0.062      95     130 ..       8      43 ..       2      44 .] 0.91

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.6e-06
    PF09828.4  95 lapeaaGleailaGlseslkdddelleaalalydal 130
                  ++++++Gl a+l G ++sl++d++ l+  ++++++l
  MMETSP1325-20131115|12110_1   8 QSAASSGLGAALGGKQRSLRNDENVLRRVMNILQQL 43 
                  67899***************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 195.26
//
Query:       MMETSP1325-20131115|12119_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.4   0.3      0.028   14.4   0.2    1.1  1  PF02583.12 Metal-sensitive transcriptional repressor


Domain annotation for each model (and alignments):
>> PF02583.12  Metal-sensitive transcriptional repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.2     2e-06     0.028      39      70 ..      21      51 ..       5      61 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2e-06
   PF02583.12 39 aAvrsAlnkvgkllleehlkecvaeaieseee 70
                 +Av+ A+++++ ++ e+h+++c  e+ +  ++
  MMETSP1325-20131115|12119_1 21 KAVSVAVEEAALCVCEQHTRSCTCEQHSA-RA 51
                 79*********************966644.22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.61
# Mc/sec: 247.49
//
Query:       MMETSP1325-20131115|12118_1  [L=171]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.47s 00:00:00.79 Elapsed: 00:00:00.55
# Mc/sec: 745.05
//
Query:       MMETSP1325-20131115|12124_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      192  (0.0140433); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.44s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|12123_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.42s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|12122_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-37  125.9   0.0    2.4e-36  124.4   0.0    1.7  2  PF00071.17 Ras family
    7.9e-15   55.2   0.0    1.3e-14   54.5   0.0    1.4  1  PF08477.8  Miro-like protein
    3.5e-05   23.0   0.0    4.4e-05   22.6   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
  ------ inclusion threshold ------
       0.03   14.1   0.0      0.085   12.6   0.0    1.8  2  PF05198.11 Translation initiation factor IF-3, N-terminal domain


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.4   0.0     7e-40   2.4e-36       1     160 [.      74     245 ..      74     247 .. 0.93
   2 ?    2.3   0.0     0.026        88      19      33 ..     240     254 ..     236     262 .. 0.82

  Alignments for each domain:
  == domain 1    score: 124.4 bits;  conditional E-value: 7e-40
                  EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEET..TEEEEEEEEEE---GGGHHHHH..HHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST...TTSSEEEE---TTGGG.....G-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHHHHH CS
   PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievd..gkevkleiwDTAGqeefkslrs..lyyrdaegillvyditsresfenvkkwveeikrvae...envpivLvGnKvDlee.....kravsteegeelakelglkfletSAktnenveeafeellrei 160
                  K+v+vGd +vGKt+l+    +++++++y +T  vd ++k++ v   +  v+l ++D AGq  f++++s  + y++a+ +++vydi +r+sf++v++w++++k++ +     +p vLv+nK+Dl++       +v+teeg +lak+ gl f+etSA ++++v+  f  ++++ 
  MMETSP1325-20131115|12122_1  74 KVVIVGDACVGKTALVQVNDSGNYPKSYMMTSWVDMTIKQVAVPdtNAGVELFLFDCAGQTVFNQVESnvMQYENASYVMVVYDIGNRASFDHVQTWLQKVKSQRPpnaPPLPGVLVANKIDLRSdepdaPTVVTTEEGATLAKNEGLDFFETSAAQQKDVDMPFFFIADQF 245
                  9******************************************95566789999***********9872256899*****************************9987767999**********989988899********************************9998875 PP

  == domain 2    score: 2.3 bits;  conditional E-value: 0.026
                  HHHSSS-SS-TTTS- CS
   PF00071.17  19 fvedkFkeeyesTig 33 
                  f+ d+F+++y++T+ 
  MMETSP1325-20131115|12122_1 240 FIADQFHKKYQETVK 254
                  99***********94 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   3.9e-18   1.3e-14       1     119 []      74     195 ..      74     195 .. 0.83

  Alignments for each domain:
  == domain 1    score: 54.5 bits;  conditional E-value: 3.9e-18
    PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtel....lelwdlggreelkkehell..lkkadaillvydltdeesleevsellawlaelrklgkk.ipvilvgnklD 119
                  kvv+vGd +vGK++l++   ++++p    ++ + ++ + +++++v v +      l l+d++g+  +++    +   ++a+ +++vyd+ +++s+++v+  l++ +++r  +   +p +lv+nk+D
  MMETSP1325-20131115|12122_1  74 KVVIVGDACVGKTALVQVNDSGNYP----KSYMMTSWVDMTIKQVAVPDTNagveLFLFDCAGQTVFNQVESNVmqYENASYVMVVYDIGNRASFDHVQTWLQKVKSQRPPNAPpLPGVLVANKID 195
                  8************************....44444444444444444444444559779******999887777767899*******************************99999*********99 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.3e-08   4.4e-05      14     165 ..      72     235 ..      55     245 .. 0.79

  Alignments for each domain:
  == domain 1    score: 22.6 bits;  conditional E-value: 1.3e-08
                  EEEEEEE--TT---HHHHHHHHHS-EEE...E-S--S-EEEEEEE....TTEEEEEEE----GGGGGCGGGG..CTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGT..TSEEEEEEE-TTSTT---HH.HHHHHTTTTTST.SSSEEEEEEBTTTTB--H CS
   PF00025.16  14 elrilllGLDnaGKtTilkklkleelvt...tvPTigfnveelei....knlkftvwDvGGqeklRplWknY..fektdavifvvDsadreRleeakeeLkalleeeelk..evallvlaNKqDlpealsee.elrellgleelkgkrkleiqkcsavkgeglk 165
                   ++++++G  + GKt +++   +++  +   ++  + ++++++++     ++++ ++D  Gq+   ++ +n   +e+   v+ v D  +r  +++ ++ L+++ +++  +    + +++aNK+Dl+++  ++  + ++ +  +l +++ l  +++sa ++++++
  MMETSP1325-20131115|12122_1  72 RCKVVIVGDACVGKTALVQVNDSGNYPKsymMTSWVDMTIKQVAVpdtnAGVELFLFDCAGQTVFNQVESNVmqYENASYVMVVYDIGNRASFDHVQTWLQKVKSQRPPNapPLPGVLVANKIDLRSDEPDApTVVTTEEGATLAKNEGLDFFETSAAQQKDVD 235
                  579***************99998887665435666899*****9977778899**********9999988752277888899999*****************9988876622456699*******987765513444444455777888888888888877765 PP

>> PF05198.11  Translation initiation factor IF-3, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.3   7.9e+03      44      59 ..      88     103 ..      86     104 .. 0.75
   2 ?   12.6   0.0   2.5e-05     0.085      13      75 ..     192     258 ..     188     259 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 2.3
   PF05198.11  44 LVevspnakpPvckim 59 
                  LV+v+++ + P   +m
  MMETSP1325-20131115|12122_1  88 LVQVNDSGNYPKSYMM 103
                  8999998888865555 PP

  == domain 2    score: 12.6 bits;  conditional E-value: 2.5e-05
   PF05198.11  13 reVrlidedgeqlGvvstreAlrlAeekglDLVevs....pnakpPvckimdYgkfkYeqkkkkkea 75 
                  +++ l +++  + +vv+t+e   lA+++glD  e s    ++ + P   i d    kY++  k+ e+
  MMETSP1325-20131115|12122_1 192 NKIDLRSDEPDAPTVVTTEEGATLAKNEGLDFFETSaaqqKDVDMPFFFIADQFHKKYQETVKRSEQ 258
                  56777778888899*********************97766667788888888888888888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       516  (0.0377414); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.39s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 1313.00
//
Query:       MMETSP1325-20131115|12126_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-42  143.1   0.0    6.1e-42  142.9   0.0    1.0  1  PF00227.21 Proteasome subunit


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.9   0.0   4.4e-46   6.1e-42       3     190 .]       7     189 ..       5     189 .. 0.97

  Alignments for each domain:
  == domain 1    score: 142.9 bits;  conditional E-value: 4.4e-46
                  C--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEEE CS
   PF00227.21   3 kGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknvevavi 190
                  +G++++G++gk++v +a+d+r+  +++++s + ++Kifk +d+++++++Gla+D+ tl + ++ ++++y+lr++r++++e     +++ll + +++++++p++++ ++ag++e+++p+l  +d +G+ +  k++v+ G+ +   ++++e  y++d++ ++++e++ ++l ++++rd+lsg+++ v vi
  MMETSP1325-20131115|12126_1   7 NGGAIIGMTGKNCVAIACDTRLGLQQQTVSCD-FQKIFKMNDKLMLGVTGLATDVLTLQQLLKFKLNMYKLREEREMKPE----TFSWLLTSVLYEKRFGPYFTEPVVAGLNEKNEPFLSAMDLIGAPVMTKDFVVSGTCTANLNGMCETMYRPDMEPDDLFETISQCLLASVDRDALSGWGAMVHVI 189
                  89**************************7777.9**********************************************....******************************************************66888***************************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.41s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 977.71
//
Query:       MMETSP1325-20131115|12129_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       171  (0.0125073); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 412.17
//
Query:       MMETSP1325-20131115|12134_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.074   11.8   0.0       0.08   11.7   0.0    1.0  1  PF04029.9 2-phosphosulpholactate phosphatase


Domain annotation for each model (and alignments):
>> PF04029.9  2-phosphosulpholactate phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.9e-06      0.08     138     179 ..       5      46 ..       2      58 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5.9e-06
    PF04029.9 138 ivcagtegkfslEDvlcAgaiaklllkegeeaelndealaal 179
                   +++g +++++ E +++Agai+ + +++++e e   e +aa 
  MMETSP1325-20131115|12134_1   5 TLMMGVQQRYNREQTALAGAITGEKTRQKTELERRKEKRAAE 46 
                  5789*******************9999999855555554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       844  (0.061732); expected 273.4 (0.02)
Passed bias filter:                      514  (0.0375951); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 282.77
//
Query:       MMETSP1325-20131115|12135_1  [L=156]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0066   14.8   0.0     0.0072   14.7   0.0    1.1  1  PF05889.8 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)
  ------ inclusion threshold ------
       0.07   12.7   0.1       0.14   11.8   0.1    1.4  1  PF10975.3 Protein of unknown function (DUF2802)
       0.61   10.7   4.4         18    6.0   0.7    2.5  3  PF07790.6 Protein of unknown function (DUF1628)


Domain annotation for each model (and alignments):
>> PF05889.8  Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.6e-06    0.0072     231     301 ..      10      80 ..       4     121 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.6e-06
    PF05889.8 231 gaiiaasdesfikeiskeypgrasaapskdvlisllllGskaykkllkeqkesfkllreklkklaeeveek 301
                  g+ +  ++e++  ++s++y + a a++s   + s  + Gs+a +  +   k  ++ l++++k+l+  +e  
  MMETSP1325-20131115|12135_1  10 GGAVGNEEEQHYSSLSRHYEQSAAAKSSSSFVGSAAATGSSAGGVAIPSSKSGKTRLQKQIKSLKSTIERM 80 
                  5567788999*******************************************************999854 PP

>> PF10975.3  Protein of unknown function (DUF2802)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1     3e-05      0.14       9      40 ..      65      96 ..      63      99 .. 0.95

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 3e-05
    PF10975.3  9 eleqklkqleerleeleqqdpesrlYsrAakl 40
                  l++++k+l++++e++e +  ++ +Y+ Aa++
  MMETSP1325-20131115|12135_1 65 RLQKQIKSLKSTIERMELEGGGDXAYDAAAEM 96
                 689***************************99 PP

>> PF07790.6  Protein of unknown function (DUF1628)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.4   6.3e+03      28      50 ..      10      32 ..       3      43 .. 0.52
   2 ?    5.6   0.0    0.0051        23      20      68 ..      44      91 ..      39     101 .. 0.84
   3 ?    6.0   0.7     0.004        18       4      16 ..     102     114 ..      99     115 .. 0.95

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 1.4
    PF07790.6 28 fglaskeekaPqasldvkidssa 50
                 +g  ++ee++   sl+ ++++sa
  MMETSP1325-20131115|12135_1 10 GGAVGNEEEQHYSSLSRHYEQSA 32
                 34334455555555544555544 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.0051
    PF07790.6 20 aAviaafvfglaskeekaPqasldvkidssadtgkevkiehkgGdsidl 68
                 aA+ +++++g+a +++k+ ++ l+ +i+s ++t + +++e  gGd   +
  MMETSP1325-20131115|12135_1 44 AAATGSSAGGVAIPSSKSGKTRLQKQIKSLKSTIERMELEG-GGDXAYD 91
                 8899999****99*****************99998899985.6666555 PP

  == domain 3    score: 6.0 bits;  conditional E-value: 0.004
    PF07790.6   4 SpViGviLmvait 16 
                  SpV+Gv+++ a+t
  MMETSP1325-20131115|12135_1 102 SPVVGVMILAALT 114
                  9********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       623  (0.0455676); expected 273.4 (0.02)
Passed bias filter:                      480  (0.0351083); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.38s 00:00:00.89 Elapsed: 00:00:00.53
# Mc/sec: 705.34
//
Query:       MMETSP1325-20131115|12137_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-09   35.7   3.1    3.5e-09   35.7   2.2    2.3  2  PF00467.24 KOW motif
  ------ inclusion threshold ------
      0.023   13.7   0.1      0.031   13.2   0.1    1.3  1  PF04452.9  RNA methyltransferase


Domain annotation for each model (and alignments):
>> PF00467.24  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   2.2   5.2e-13   3.5e-09       1      32 []      51      82 ..      51      82 .. 0.97
   2 ?   -1.7   0.0      0.33   2.2e+03      17      28 ..     103     114 ..     102     118 .. 0.77

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 5.2e-13
                 TTBEEEE-----TT-EEEEEEEETTTCEEEEE CS
   PF00467.24  1 kGdyVrvisGpfkGrpGkvvevdrskarVvve 32
                 k+d+V+v++G +k+r+Gkv++v+r+k+ +++e
  MMETSP1325-20131115|12137_1 51 KDDEVMVVRGSHKNREGKVIQVYRKKYVIHIE 82
                 79****************************97 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 0.33
                  EEEEEEETTTCE CS
   PF00467.24  17 Gkvvevdrskar 28 
                  +++++   +k+r
  MMETSP1325-20131115|12137_1 103 CVITKLKLDKDR 114
                  889888888854 PP

>> PF04452.9  RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   4.5e-06     0.031       7      58 ..      39      90 ..      33     112 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.5e-06
                 HHHHHHTTTT-----EEEEEE---EEEEEEEEEEESSEEEEEEEEEEE---S CS
    PF04452.9  7 eahHlvkVlRlkegdeiklfdgdgkeylaeieeiskkkvevkilekeeenke 58
                  a++ v+ + ++++de+ ++ g++k+ +++++++ +kk++++i++  + +++
  MMETSP1325-20131115|12137_1 39 VAKYNVRSMPIRKDDEVMVVRGSHKNREGKVIQVYRKKYVIHIERVSRDKAN 90
                 68999**********************************9999876665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.33s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 750.16
//
Query:       MMETSP1325-20131115|12143_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 307.46
//
Query:       MMETSP1325-20131115|12146_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 229.44
//
Query:       MMETSP1325-20131115|12147_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.49
# Mc/sec: 268.98
//
Query:       MMETSP1325-20131115|12158_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 219.24
//
Query:       MMETSP1325-20131115|12160_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-31  110.0   0.1    1.7e-31  109.4   0.0    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.4   0.0   1.2e-35   1.7e-31       3     155 ..      46     201 ..      44     202 .. 0.81

  Alignments for each domain:
  == domain 1    score: 109.4 bits;  conditional E-value: 1.2e-35
                  XXXXXXXXXXXX.XXXXXX.---...-TTTTT--------TTT------------------S--TT--.STT---....--.--S-TT.THHHH---HHHHHHHHTT---------------------..---.-----------STTT----TTTTT------- CS
   PF00504.16   3 aeldgslpgdlg.fDplglskdp...tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeagg....ls.lptllalqillligflelareqelkapesegsekraypGglgfdpl..gla.kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                  ael g ++++lg +Dp+gl ++    +++rlr +E++HGRv+MlavlG++v+ ++++l++  +  +  a+a+  +    ++ lp+++++qi+l++g+le+   +++           ++pG++   ++  g++  ++e k +++  E++nGR+AM+++l++++++
  MMETSP1325-20131115|12160_1  46 AEL-G-AQKPLGfWDPIGLVENVdqeRFDRLRSVEIKHGRVSMLAVLGHIVTSNGIRLPGMISNSKEIAFADIPTglkaFDvLPAAGFWQIVLFCGALEILVMRDVTG-------LAEFPGDFRNGFIdfGWDkFSPEVKLQKRAIELNNGRAAMMGILALMMHE 201
                  566.6.899***********765779*******************************55543333334355533233333479999999***********97777632.......3579***8777664477799***************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1041.68
//
Query:       MMETSP1325-20131115|12167_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|12168_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-05   25.0   0.0    1.5e-05   24.4   0.0    1.3  1  PF13242.1 HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> PF13242.1  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   1.1e-09   1.5e-05      33      73 ..       2      39 ..       1      41 [. 0.86

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 1.1e-09
                 HHHHHHHH---EE----------TT---TTTT-S---S--- CS
    PF13242.1 33 tDieaAnaaGirsilVltGvsreedlklakakpdyvvddle 73
                 +D +aA+aaG++s++V++G +  e l+   ++ d+vv + e
  MMETSP1325-20131115|12168_1  2 SDGKAARAAGCKSVGVAWGSHPVENLT---PQFDIVVHTPE 39
                 899********************9988...77888877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 235.50
//
Query:       MMETSP1325-20131115|12173_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.037   13.6   0.3      0.044   13.4   0.2    1.2  1  PF05010.9 Transforming acidic coiled-coil-containing protein (TACC)
      0.065   13.0   0.5       0.11   12.2   0.3    1.5  1  PF11014.3 Protein of unknown function (DUF2852)


Domain annotation for each model (and alignments):
>> PF05010.9  Transforming acidic coiled-coil-containing protein (TACC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   6.4e-06     0.044      36      99 ..      54     119 ..      24     146 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6.4e-06
    PF05010.9  36 tskvnellkivdelektvadrleesqkkkklrkrevesvltekdqalsdlnsleksls...dlfkry 99 
                  + + ++ +k +++  k v dr e  q   +   r++ + l+ek+++ ++ + le+s+    d++kr+
  MMETSP1325-20131115|12173_1  54 EAERKKRRKRKQTIVKEVGDRFEGVQG-DEADTRRLRRSLMEKEELEKHDSDLETSATvfaDVMKRF 119
                  55667788889999999*****99988.5677889*********************75555777776 PP

>> PF11014.3  Protein of unknown function (DUF2852)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   1.7e-05      0.11      28      88 ..       4      64 ..       2     100 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.7e-05
    PF11014.3 28 allaylilskrlkafkk.scaseklrekvkraearaatkssgNeaFdeYreetlrrleeeqe 88
                 ++  yl +s++++  +  + ++++   k++    r  t+ +gNea d++r+e  r+   +++
  MMETSP1325-20131115|12173_1  4 VMKLYLTWSDEVDDLRLlELSRQEAALKLQGW-FRRITSGTGNEAVDAFRSEAERKKRRKRK 64
                 66789999988886665333344444444444.445699***********998776555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       667  (0.0487858); expected 273.4 (0.02)
Passed bias filter:                      423  (0.0309391); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.35s 00:00:00.85 Elapsed: 00:00:00.60
# Mc/sec: 702.93
//
Query:       MMETSP1325-20131115|12181_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.49
# Mc/sec: 180.95
//
Query:       MMETSP1325-20131115|12180_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-34  117.4   0.0    6.3e-34  117.2   0.0    1.0  1  PF02913.14 FAD linked oxidases, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02913.14  FAD linked oxidases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.2   0.0   4.6e-38   6.3e-34     123     249 .]       3     130 ..       1     130 [. 0.95

  Alignments for each domain:
  == domain 1    score: 117.2 bits;  conditional E-value: 4.6e-38
                  HCTTEEEEEEEEE--HHHHHHHHHHHHHHHHHHHEEEEEEEE-EEEEEEEEEEEETT-H.HHHHHHHHHHHHHHHHHHH----BSS--GGGHHHHHHHTHHHHHHHHHHHHHHHHHH-TT--BSTT-- CS
   PF02913.14 123 lgagalvftedvsvpvselpdlvaeikellakyglvvvlfgHvgdgnlhlyilfdakde.eeeeraeelvdevidlavalGGsisgeHGvGrdkkawlkeekgeeglalmrriKaalDPnniLNPgkv 249
                  l++g+  +++dv+vp+s+l d+ +e+ + +a+ g+++  ++H+gdgn+h  +l++++d+ + ++r +e+ ++++ +a+a+GG+++geHGvG  k   l++e +++ l++m  iK+ lDP+n++NPgkv
  MMETSP1325-20131115|12180_1   3 LKPGSKGLITDVCVPISRLSDCMEETAADIAELGVIAPFLSHAGDGNFHCIVLVTPDDDdDLKRRQAEFNERLVNRAIAMGGTCTGEHGVGHGKMGSLEKEHSPVCLDYMALIKRSLDPQNLFNPGKV 130
                  67899999*********************************************99998846677788999999******************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 765.79
//
Query:       MMETSP1325-20131115|12182_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   11.7   0.3       0.11   11.5   0.2    1.0  1  PF06003.7 Survival motor neuron protein (SMN)


Domain annotation for each model (and alignments):
>> PF06003.7  Survival motor neuron protein (SMN)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   7.7e-06      0.11     138     202 ..      12      75 ..       6      79 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 7.7e-06
    PF06003.7 138 tesstdesdrssrsheskdksnlekakssqknlrfppvppptppglgrrgeklstlppflsgwpp 202
                  +++st  s+++s  h+ k   n++ + ++   +++pp p   +p +g+  + +++ +  +  w p
  MMETSP1325-20131115|12182_1  12 SPESTPTSKKASVKHRLKR-INVDLGTTAGDSTQLPPLPVASTPMVGKAKKIVEKGDKLVDRWRP 75 
                  6789999999999998887.9**************************998888888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.46
# Mc/sec: 416.76
//
Query:       MMETSP1325-20131115|12184_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       468  (0.0342305); expected 273.4 (0.02)
Passed bias filter:                      363  (0.0265506); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 296.02
//
Query:       MMETSP1325-20131115|12188_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-13   50.6   0.0    2.3e-13   50.0   0.0    1.2  1  PF05542.6 Protein of unknown function (DUF760)


Domain annotation for each model (and alignments):
>> PF05542.6  Protein of unknown function (DUF760)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   1.7e-17   2.3e-13       3      77 ..      39     115 ..      37     119 .. 0.94

  Alignments for each domain:
  == domain 1    score: 50.0 bits;  conditional E-value: 1.7e-17
    PF05542.6   3 Llkyirslkpervaeleesaspevleaikehvsgllgtlsp...seqfqvviqisrerlaqLlaasmmlGYfLrraeq 77 
                  L +yi+sl+p+++ +l+e + p ++ea+k+ v  ++g+  +   + +++   +++r++la+L++++++lGY Lr+ae 
  MMETSP1325-20131115|12188_1  39 LAEYIASLPPKQRDRLTEGIEPATVEAMKRLVGWVVGET-DivgQADSKGNLTLDRSSLASLCLWQLVLGYKLREAEA 115
                  899***********************************9.4457899999**************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       438  (0.0320363); expected 273.4 (0.02)
Passed bias filter:                      412  (0.0301346); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.57
# Mc/sec: 516.46
//
Query:       MMETSP1325-20131115|12197_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.016   14.9   0.0      0.024   14.4   0.0    1.3  1  PF00400.27 WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.7e-06     0.024       2      38 ..      27      64 ..      26      65 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.7e-06
                 EEEEEEESSSSSEEEEEEESS.STEEEEEETTSEEEEE CS
   PF00400.27  2 eckatlrgHtspVtcvafspd.gpllasgSrDgtirlW 38
                 e++ +  gHts V++ +f+      + s S+D+   +W
  MMETSP1325-20131115|12197_1 27 ELLFIHGGHTSKVSDFSFNARdEWAVMSVSEDNIMQMW 64
                 5678999**************************99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|12198_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-40  134.8   0.0    2.4e-06   26.9   0.0    6.5  7  PF00023.25 Ankyrin repeat
    3.6e-39  132.8   0.1    3.1e-15   56.1   0.0    3.5  3  PF12796.2  Ankyrin repeats (3 copies)
      2e-34  117.2   0.1    3.4e-07   30.4   0.0    5.6  6  PF13637.1  Ankyrin repeats (many copies)
    1.8e-30  104.1   1.4    4.4e-09   36.1   0.0    5.3  5  PF13857.1  Ankyrin repeats (many copies)
    2.9e-30  101.1   0.0    8.3e-05   22.3   0.0    6.7  7  PF13606.1  Ankyrin repeat
  ------ inclusion threshold ------
       0.14   11.6   0.0        0.4   10.0   0.0    1.7  2  PF03158.8  Multigene family 530 protein


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.8e-06    0.0065       6      32 ..      20      46 ..      18      47 .. 0.91
   2 !   20.0   0.0   1.6e-07   0.00036       1      29 [.      49      77 ..      49      79 .. 0.90
   3 !   26.9   0.0   1.1e-09   2.4e-06       1      32 [.      84     115 ..      84     116 .. 0.95
   4 !   15.1   0.0   5.8e-06     0.013       1      23 [.     117     139 ..     117     144 .. 0.95
   5 !   22.4   0.0   2.8e-08   6.4e-05       2      33 .]     152     183 ..     151     183 .. 0.97
   6 !   25.8   0.0   2.3e-09   5.2e-06       2      31 ..     185     214 ..     184     216 .. 0.95
   7 ?   -2.7   0.0       2.5   5.7e+03       8      20 ..     225     237 ..     219     238 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 2.8e-06
                 HHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25  6 LHlAalrgnlevvklLlsqGAdlnaqd 32
                 L  A++ g+++vv +L+++G d+  ++
  MMETSP1325-20131115|12198_1 20 LWEACEEGDVDVVADLIKRGIDVMKVT 46
                 778*******************98776 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 1.6e-07
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTT CS
   PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdln 29
                 dG+T+LH+Aa + ++ev++l  ++  +++
  MMETSP1325-20131115|12198_1 49 DGYTALHVAADCAQAEVLELICEKHPEVD 77
                 8*******************999877665 PP

  == domain 3    score: 26.9 bits;  conditional E-value: 1.1e-09
                  TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                  dG+TPL +A+++g+levv+lL  + Adl  +d
  MMETSP1325-20131115|12198_1  84 DGDTPLLIACENGCLEVVELLARREADLSRKD 115
                  8**************************98877 PP

  == domain 4    score: 15.1 bits;  conditional E-value: 5.8e-06
                  TSCBHHHHHHHTTHHHHHHHHHH CS
   PF00023.25   1 dGfTPLHlAalrgnlevvklLls 23 
                  dG+TP  +A   g+++v++lL++
  MMETSP1325-20131115|12198_1 117 DGRTPMFIATVEGHMDVLRLLVE 139
                  8********************98 PP

  == domain 5    score: 22.4 bits;  conditional E-value: 2.8e-08
                  SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33 
                  G+TP   A+   +l+v+++L ++ A+l+a+d+
  MMETSP1325-20131115|12198_1 152 GRTPFWAACATQQLNVMSFLMKHQANLDACDN 183
                  9*****************************97 PP

  == domain 6    score: 25.8 bits;  conditional E-value: 2.3e-09
                  SCBHHHHHHHTTHHHHHHHHHHTTSSTTHB CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaq 31 
                  G +PL  Aa+ g+ evvk+L++ G d+na+
  MMETSP1325-20131115|12198_1 185 GLSPLAFAAQQGHFEVVKYLVGWGVDPNAV 214
                  899*************************97 PP

  == domain 7    score: -2.7 bits;  conditional E-value: 2.5
                  HHHHTTHHHHHHH CS
   PF00023.25   8 lAalrgnlevvkl 20 
                  +A   gn +++++
  MMETSP1325-20131115|12198_1 225 WAEAQGNEDILEF 237
                  6667789999876 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0     7e-12   1.6e-08      29      87 ..      19      78 ..       7      80 .. 0.90
   2 !   56.1   0.0   1.4e-18   3.1e-15      11      81 ..      64     140 ..      64     149 .. 0.93
   3 !   43.7   0.0   9.9e-15   2.3e-11       3      78 ..     158     238 ..     156     245 .. 0.90

  Alignments for each domain:
  == domain 1    score: 34.6 bits;  conditional E-value: 7e-12
    PF12796.2 29 pLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklLlekgadvnl 87
                  L  A+e g++++v  L+++g dv   + ++g+t+Lh+A+   ++e+++l++ek  +v++
  MMETSP1325-20131115|12198_1 19 ILWEACEEGDVDVVADLIKRGIDVMKVTeEDGYTALHVAADCAQAEVLELICEKHPEVDV 78
                 6778*******************9776679************************999875 PP

  == domain 2    score: 56.1 bits;  conditional E-value: 1.4e-18
    PF12796.2  11 elvklLlekgadvdl......getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlek 81 
                  e+++l++ek  +vd+      g+tpL +A+e+g+le+v+lL  ++ad+  kd++g+tp+++A   gh ++++lL+ek
  MMETSP1325-20131115|12198_1  64 EVLELICEKHPEVDVdlatkdGDTPLLIACENGCLEVVELLARREADLSRKDADGRTPMFIATVEGHMDVLRLLVEK 140
                  57899***998888888**********************************************************98 PP

  == domain 3    score: 43.7 bits;  conditional E-value: 9.9e-15
    PF12796.2   3 lAaengnlelvklLlekgadvdlget....pLhlAaeagnleivklLleagadvnakd.kegntpLhlAvrnghlelvklL 78 
                   A+ + +l+++ +L++++a++d  ++    pL  Aa++g++e+vk+L+  g d+na + + g ++  +A  +g+ +++++ 
  MMETSP1325-20131115|12198_1 158 AACATQQLNVMSFLMKHQANLDACDNkglsPLAFAAQQGHFEVVKYLVGWGVDPNAVSpQTGASARDWAEAQGNEDILEFF 238
                  5899999***************94445788**************************99*****************999986 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   8.6e-09     2e-05       4      50 ..      19      66 ..      17      70 .. 0.87
   2 !   16.4   0.0   3.9e-06    0.0089      15      53 ..      64     104 ..      60     105 .. 0.85
   3 !   30.4   0.0   1.5e-10   3.4e-07       2      54 .]      86     138 ..      85     138 .. 0.96
   4 !   24.1   0.0   1.5e-08   3.4e-05       1      53 [.     118     171 ..     118     172 .. 0.92
   5 !   28.2   0.0   7.4e-10   1.7e-06       1      54 []     152     205 ..     152     205 .. 0.97
   6 !   18.9   0.0   6.4e-07    0.0015       1      53 [.     185     238 ..     185     238 .. 0.89

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 8.6e-09
    PF13637.1  4 aLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieil 50
                  L  a+  g++++v+ L+++gid+ ++  e+G taLh+Aa   + e+l
  MMETSP1325-20131115|12198_1 19 ILWEACEEGDVDVVADLIKRGIDVMKVtEEDGYTALHVAADCAQAEVL 66
                 6889***********************8899********966665555 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 3.9e-06
    PF13637.1  15 elvklLlekg..idinrtdesGntaLhiAalrgnieilklL 53 
                  e+++l++ek   +d++   ++G+t+L iA+++g +e+++lL
  MMETSP1325-20131115|12198_1  64 EVLELICEKHpeVDVDLATKDGDTPLLIACENGCLEVVELL 104
                  6888899875237777779******************9998 PP

  == domain 3    score: 30.4 bits;  conditional E-value: 1.5e-10
    PF13637.1   2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                   t+L  a+  g+le+v+lL  + +d+ r+d++G+t++ iA   g++++l+lL+
  MMETSP1325-20131115|12198_1  86 DTPLLIACENGCLEVVELLARREADLSRKDADGRTPMFIATVEGHMDVLRLLV 138
                  799*****************889****************************96 PP

  == domain 4    score: 24.1 bits;  conditional E-value: 1.5e-08
    PF13637.1   1 gltaLhyaaisgrlelvklLlek.gidinrtdesGntaLhiAalrgnieilklL 53 
                  g+t+++ a   g++++++lL+ek   d+ +  ++G+t++  A+ ++++++  +L
  MMETSP1325-20131115|12198_1 118 GRTPMFIATVEGHMDVLRLLVEKvPNDLEKHENEGRTPFWAACATQQLNVMSFL 171
                  6899999999*************88889999888****************9998 PP

  == domain 5    score: 28.2 bits;  conditional E-value: 7.4e-10
    PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                  g+t++  a++   l +  +L ++ ++++++d++G ++L +Aa+ g++e++k+L+
  MMETSP1325-20131115|12198_1 152 GRTPFWAACATQQLNVMSFLMKHQANLDACDNKGLSPLAFAAQQGHFEVVKYLV 205
                  68999***********************************************96 PP

  == domain 6    score: 18.9 bits;  conditional E-value: 6.4e-07
    PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklL 53 
                  gl++L  aa++g+ e+vk+L+  g+d+n++ +  G +a + A   gn +il+++
  MMETSP1325-20131115|12198_1 185 GLSPLAFAAQQGHFEVVKYLVGWGVDPNAVsPQTGASARDWAEAQGNEDILEFF 238
                  57999****************99*******999999998888888888888875 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.052   1.2e+02      23      45 ..      23      45 ..      23      48 .. 0.88
   2 !   32.8   0.0   2.2e-11     5e-08      11      56 .]      45      92 ..      35      92 .. 0.91
   3 !   36.1   0.0   1.9e-12   4.4e-09      10      56 .]      79     125 ..      75     125 .. 0.88
   4 !   23.4   0.1     2e-08   4.5e-05       2      56 .]     138     192 ..     136     192 .. 0.88
   5 !   25.5   0.0   4.2e-09   9.5e-06      13      56 .]     182     226 ..     182     226 .. 0.90

  Alignments for each domain:
  == domain 1    score: 3.0 bits;  conditional E-value: 0.052
    PF13857.1 23 AakggalevvrlLlapgadlnlr 45
                 A++ g+++vv  L+++g d    
  MMETSP1325-20131115|12198_1 23 ACEEGDVDVVADLIKRGIDVMKV 45
                 899**************998765 PP

  == domain 2    score: 32.8 bits;  conditional E-value: 2.2e-11
    PF13857.1 11 atdeggntpLhlAakggalevvrlLl..apgadlnlrdsdgltaldlA 56
                  t+e g+t+Lh+Aa + ++ev++l++  +p++d +l ++dg+t+l +A
  MMETSP1325-20131115|12198_1 45 VTEEDGYTALHVAADCAQAEVLELICekHPEVDVDLATKDGDTPLLIA 92
                 57899****************************************988 PP

  == domain 3    score: 36.1 bits;  conditional E-value: 1.9e-12
    PF13857.1  10 natdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                  +   + g tpL +A+++g+levv+lL +++adl  +d+dg+t++ +A
  MMETSP1325-20131115|12198_1  79 DLATKDGDTPLLIACENGCLEVVELLARREADLSRKDADGRTPMFIA 125
                  44445566***********************************9988 PP

  == domain 4    score: 23.4 bits;  conditional E-value: 2e-08
    PF13857.1   2 lehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                  +e+ p+d+   +++g+tp+  A+  ++l+v+ +L +++a+l+++d+ gl++l +A
  MMETSP1325-20131115|12198_1 138 VEKVPNDLEKHENEGRTPFWAACATQQLNVMSFLMKHQANLDACDNKGLSPLAFA 192
                  4544777777788999***********************************9766 PP

  == domain 5    score: 25.5 bits;  conditional E-value: 4.2e-09
    PF13857.1  13 deggntpLhlAakggalevvrlLlapgadlnlrdsdg.ltaldlA 56 
                  d++g +pL +Aa +g+ evv++L+ +g+d+n+   +   +a d+A
  MMETSP1325-20131115|12198_1 182 DNKGLSPLAFAAQQGHFEVVKYLVGWGVDPNAVSPQTgASARDWA 226
                  78999**************************99888777777766 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0012       2.7       6      28 ..      20      42 ..      16      44 .. 0.90
   2 !   20.7   0.0   1.2e-07   0.00028       1      29 [.      49      77 ..      49      79 .. 0.93
   3 !   22.3   0.0   3.7e-08   8.3e-05       1      28 [.      84     111 ..      84     112 .. 0.93
   4 !   13.1   0.0   3.5e-05      0.08       1      24 [.     117     140 ..     117     147 .. 0.88
   5 !    8.6   0.0   0.00098       2.2       2      29 ..     152     179 ..     151     180 .. 0.94
   6 !   18.7   0.0   5.2e-07    0.0012       2      30 .]     185     213 ..     184     213 .. 0.95
   7 ?   -1.2   0.0       1.4   3.3e+03      12      24 ..     229     241 ..     225     244 .. 0.83

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0012
    PF13606.1  6 LhlAasngrielveaLlengadi 28
                 L  A++ g +++v  L+++g+d+
  MMETSP1325-20131115|12198_1 20 LWEACEEGDVDVVADLIKRGIDV 42
                 5569******************8 PP

  == domain 2    score: 20.7 bits;  conditional E-value: 1.2e-07
    PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                 +G+T+Lh+Aa + + e++e+ +e+++ ++
  MMETSP1325-20131115|12198_1 49 DGYTALHVAADCAQAEVLELICEKHPEVD 77
                 79**********************99775 PP

  == domain 3    score: 22.3 bits;  conditional E-value: 3.7e-08
    PF13606.1   1 nGnTpLhlAasngrielveaLlengadi 28 
                  +G+TpL +A++ng++e+ve+L ++ ad+
  MMETSP1325-20131115|12198_1  84 DGDTPLLIACENGCLEVVELLARREADL 111
                  79*******************9999987 PP

  == domain 4    score: 13.1 bits;  conditional E-value: 3.5e-05
    PF13606.1   1 nGnTpLhlAasngrielveaLlen 24 
                  +G+Tp+++A   g+++++++L+e+
  MMETSP1325-20131115|12198_1 117 DGRTPMFIATVEGHMDVLRLLVEK 140
                  79********************97 PP

  == domain 5    score: 8.6 bits;  conditional E-value: 0.00098
    PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                  G+Tp+  A+  ++++++++L ++ a+++
  MMETSP1325-20131115|12198_1 152 GRTPFWAACATQQLNVMSFLMKHQANLD 179
                  9************************997 PP

  == domain 6    score: 18.7 bits;  conditional E-value: 5.2e-07
    PF13606.1   2 GnTpLhlAasngrielveaLlengadina 30 
                  G +pL  Aa++g+ e+v++L+  g+d+na
  MMETSP1325-20131115|12198_1 185 GLSPLAFAAQQGHFEVVKYLVGWGVDPNA 213
                  889************************96 PP

  == domain 7    score: -1.2 bits;  conditional E-value: 1.4
    PF13606.1  12 ngrielveaLlen 24 
                  +g+ +++e+  +n
  MMETSP1325-20131115|12198_1 229 QGNEDILEFFSRN 241
                  6899***999887 PP

>> PF03158.8  Multigene family 530 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.9   4.3e+03      82      95 ..      22      35 ..      17      49 .. 0.67
   2 ?   10.0   0.0   0.00017       0.4      57     117 ..     132     196 ..     123     209 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.1 bits;  conditional E-value: 1.9
    PF03158.8 82 lACeerkydiikWi 95
                  ACee  +d+++ +
  MMETSP1325-20131115|12198_1 22 EACEEGDVDVVADL 35
                 48888888888643 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.00017
    PF03158.8  57 nmlsiL.qkykeelskelsltqllfelACeerkydiikWi...gqnleiyeleaiFdiAikkkdl 117
                  ++l++L +k  ++l+k++++ ++ f  AC +++ ++++++   + nl+  +++ +  +A++ ++ 
  MMETSP1325-20131115|12198_1 132 DVLRLLvEKVPNDLEKHENEGRTPFWAACATQQLNVMSFLmkhQANLDACDNKGLSPLAFAAQQG 196
                  555555268899***************************98877899999999999999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.54
# Mc/sec: 1113.86
//
Query:       MMETSP1325-20131115|12202_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.081   12.7   0.1       0.13   12.0   0.1    1.3  1  PF11897.3 Protein of unknown function (DUF3417)


Domain annotation for each model (and alignments):
>> PF11897.3  Protein of unknown function (DUF3417)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   9.6e-06      0.13      21      95 ..      13      86 ..      11      95 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9.6e-06
    PF11897.3 21 LaynlwwsWnpeareLFrrldpelWeevghnPvklLkevsqerleelaedeeflarldevlekfdeyleakktwf 95
                 +a++ ww+W++  ++   + dp++We ++ + + ++ +v++ ++++l++ ++  + + +  +k+ +y + k+t +
  MMETSP1325-20131115|12202_1 13 IAEESWWTWDTIKEN-GPSGDPNVWEIIDGELFFFMYQVPKYKFDSLCSTDGASELIAKGDAKWANYTSGKTTSY 86
                 78999****986665.6889***********************************************99986654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 581.97
//
Query:       MMETSP1325-20131115|12207_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.34s 00:00:00.67 Elapsed: 00:00:00.60
# Mc/sec: 295.55
//
Query:       MMETSP1325-20131115|12211_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 224.96
//
Query:       MMETSP1325-20131115|12212_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.7   0.3      0.087   12.7   0.2    1.4  1  PF02694.10 Uncharacterised BCR, YnfA/UPF0060 family
      0.077   12.8   0.3       0.45   10.3   0.4    1.8  2  PF12650.2  Domain of unknown function (DUF3784)
       0.12   11.8   0.3       0.16   11.4   0.2    1.2  1  PF03010.9  GP4
       0.15   11.5   1.8       0.35   10.4   1.2    1.5  1  PF14142.1  YrzO-like protein


Domain annotation for each model (and alignments):
>> PF02694.10  Uncharacterised BCR, YnfA/UPF0060 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   2.6e-05     0.087       5      47 ..      18      60 ..      14      69 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 2.6e-05
   PF02694.10  5 illfllaalaeigGaylvwlwlreaksvllalvaaillavygf 47
                 +l+f++ ++  +  +y      +++++v++al+aa++l+v +f
  MMETSP1325-20131115|12212_1 18 LLFFIAVGIPCLFCSYYDIFQAKDDATVWYALIAAMVLTVGVF 60
                 67888999*99****************************9776 PP

>> PF12650.2  Domain of unknown function (DUF3784)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.4   0.00013      0.45      43      87 ..      14      60 ..       8      65 .. 0.76
   2 ?   -0.5   0.0      0.32   1.1e+03      20      37 ..     107     124 ..      99     126 .. 0.81

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00013
    PF12650.2 43 skdmgkfmlliaiilligallelflskl..veivaiililvllillv 87
                   +m  f+++++i  l + ++++f++k   + + a+i+ +vl+++++
  MMETSP1325-20131115|12212_1 14 FGAMLLFFIAVGIPCLFCSYYDIFQAKDdaTVWYALIAAMVLTVGVF 60
                 455666788899999999999***99986677888888888888776 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.32
    PF12650.2  20 sfLisGYntmskeekeky 37 
                   ++++ +  m+ e k+k+
  MMETSP1325-20131115|12212_1 107 LMYLATWLAMPDESKAKL 124
                  689999999999999985 PP

>> PF03010.9  GP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   4.6e-05      0.16       2      31 ..      12      41 ..      11      58 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.6e-05
    PF03010.9  2 ktygcilgllllaglpccwcifypchaaea 31
                 k +g++l +++ +g+pc +c +y  + a+ 
  MMETSP1325-20131115|12212_1 12 KLFGAMLLFFIAVGIPCLFCSYYDIFQAKD 41
                 678999999999***********9988765 PP

>> PF14142.1  YrzO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.2    0.0001      0.35       5      15 ..      18      28 ..      15      32 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0001
    PF14142.1  5 LLFFiavGvvC 15
                 LLFFiavG+ C
  MMETSP1325-20131115|12212_1 18 LLFFIAVGIPC 28
                 9********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       553  (0.0404476); expected 273.4 (0.02)
Passed bias filter:                      436  (0.03189); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.40s 00:00:00.81 Elapsed: 00:00:00.62
# Mc/sec: 498.60
//
Query:       MMETSP1325-20131115|12220_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.63
# Mc/sec: 323.32
//
Query:       MMETSP1325-20131115|12223_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-23   82.4   1.6    2.3e-23   82.3   1.1    1.0  1  PF08172.7 CASP C terminal
  ------ inclusion threshold ------
      0.062   12.9   0.3      0.081   12.5   0.2    1.3  1  PF14018.1 Domain of unknown function (DUF4234)
       0.79    9.7   2.9       0.36   10.8   0.4    1.7  2  PF12652.2 CotJB protein


Domain annotation for each model (and alignments):
>> PF08172.7  CASP C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.3   1.1   5.1e-27   2.3e-23     170     245 ..       4      79 ..       1      83 [. 0.93

  Alignments for each domain:
  == domain 1    score: 82.3 bits;  conditional E-value: 5.1e-27
    PF08172.7 170 sdryskaYeeslnPfaaFrkrEseraykrLslleRivlsltrmvLanrtsRtlffvYliaLHllvllvlyklalse 245
                   ++y++ Ye++ nP+ +F++ E++r+y +Ls++e+i+l+ trm+L+++ sRt++f+Y++ LHll++++++  a++ 
  MMETSP1325-20131115|12223_1   4 ENKYKSMYESQNNPLTQFSQMERQRKYAELSVAEKITLNTTRMFLSTKGSRTFVFFYMVTLHLLMFVTTFHWAHEA 79 
                  469***************************************************************9999877765 PP

>> PF14018.1  Domain of unknown function (DUF4234)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   1.8e-05     0.081      30      67 ..      45      82 ..      18      83 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 1.8e-05
    PF14018.1 30 nrmnspkklprfatlvlllliltlgiysiywayklger 67
                 + + s k +++f++ +++ l+l  ++  + wa++ ++r
  MMETSP1325-20131115|12223_1 45 RMFLSTKGSRTFVFFYMVTLHLLMFVTTFHWAHEACDR 82
                 334889999************************99886 PP

>> PF12652.2  CotJB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.4   7.9e-05      0.36      41      66 ..       3      28 ..       1      36 [. 0.81
   2 ?   -2.5   0.0       1.1   5.1e+03      20      27 ..      68      75 ..      57      81 .. 0.52

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 7.9e-05
    PF12652.2 41 krkelkkeYekeygpLtndgvsksek 66
                 ++++ k+ Ye++++pLt+++  + ++
  MMETSP1325-20131115|12223_1  3 MENKYKSMYESQNNPLTQFSQMERQR 28
                 678999*************9887543 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.1
    PF12652.2 20 LYLDthpe 27
                 ++  t+  
  MMETSP1325-20131115|12223_1 68 MFVTTFHW 75
                 34444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       544  (0.0397894); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 448.01
//
Query:       MMETSP1325-20131115|12225_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.007   16.3   0.0      0.011   15.7   0.0    1.4  1  PF00041.16 Fibronectin type III domain


Domain annotation for each model (and alignments):
>> PF00041.16  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   8.1e-07     0.011      47      74 ..      33      58 ..      14      63 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 8.1e-07
                 EEEEECCTTSEEEEES--TT-EEEEEEE CS
   PF00041.16 47 keftvprtttsvtltgLkpgteYefrVq 74
                  e tv +t   +t++ L p+t Y+++Vq
  MMETSP1325-20131115|12225_1 33 LESTVRSTP--FTISSLLPSTAYQVSVQ 58
                 556666666..****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.42s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 451.62
//
Query:       MMETSP1325-20131115|12229_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0014   17.8   0.1     0.0022   17.1   0.1    1.5  1  PF04545.11 Sigma-70, region 4


Domain annotation for each model (and alignments):
>> PF04545.11  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   1.6e-07    0.0022       3      18 ..      43      58 ..      40      74 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.1 bits;  conditional E-value: 1.6e-07
                 CTS-HHHHHHHHHHHT CS
   PF04545.11  3 asLpererevlelrfg 18
                 + L+ere++v+++r+g
  MMETSP1325-20131115|12229_1 43 SCLTEREQRVIRMRYG 58
                 57*************3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.56
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|12224_1  [L=540]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.4e-137  457.5   9.8   5.1e-137  457.3   6.8    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  457.3   6.8  3.8e-141  5.1e-137       1     487 [.      44     534 ..      44     535 .. 0.97

  Alignments for each domain:
  == domain 1    score: 457.3 bits;  conditional E-value: 3.8e-141
   PF00118.19   1 ladivkttLGPkGrnkmlvn...kggkivitndgatilkelelqhpvakllveaaksqdeevGDGtttaviLageLleeaeklikagihpteiirglelaleialkaLekisislsvd.k..reellkvartslnsklssresellsklvvdAvkiieeeaeldvgnigvikieggsledselieGvvldkgylspdmpkrlenpkillldcsleteke.t.ktkvvlkdaeelekleeaeekqllpllekivesgvnlviiakgiddealhfLakngilalrrvkkedlerlakltgatavsrleslee.edlGkakkveeeeigedkttliegestlsgkvatillrgateveldeleraiedalravkaalkdegvvpGGGaaelelskkLreeakslsgkeqlgieifakAleaipktLaeNagldpkevlaklkaahkkge.nlgidaetgeiidlveagilDplkvkrsalksavevasliLtidqiikak 487
                  +ad+vk+tLGPkG++k+l +    +g+i+itndgatil+++++++ +ak+lv++a+ qdeevGDGtt++++L+geLl+eae+li + ihp++ii+g ++ +eia  +Le++s++ s d +  r +l ++a+t l+skl+ +e++++++l+v+Av+ ++   + +++ i+++k +ggsl+ds+l +G++ldk++    +pkr+en+kill +++++t+k  +  + v++++  ++ ++eeae+++++ +++ki++ +vn++i+ + i + +++++a n+++a+++++ + +erla++tg++++s+++++e  + lG++k +ee +iged+++ ++  +++ g+++t++lrga+++ lde+er+++dal+++ +++   + +pGGG++e+++++++++   ++ gk+++++e f kAl+a+p ++a Nag+d+ e+++ l+aah  g+  +g+d+ +g++ d++e g+ +++k+k ++l+sa+e+a +iL++d+iik  
  MMETSP1325-20131115|12224_1  44 VADLVKSTLGPKGMDKILSSvqsENGQITITNDGATILRSISVDNAAAKVLVDIARVQDEEVGDGTTSVAVLCGELLREAEELIGQRIHPQTIIEGWRKSAEIARAKLEEMSVDNSADdEkfRADLINIAKTTLSSKLVYHEKQYFAELAVNAVLRLQ--GSGNLDHIQILKKPGGSLKDSYLADGFILDKKIGVG-QPKRVENAKILLANTAMDTDKIkIyGSRVRVDSMAKVAEIEEAERDKMRAKVQKIIDHDVNCFINRQLIYNFSEEIFAANNVMAIEHADFDGIERLAAVTGGEICSTFDHPELvS-LGECKLIEEIMIGEDRLIQFS--GCQGGSACTVVLRGASNHLLDEAERSLHDALCVLCRTVAITKTIPGGGCTEMAMAQAIEQVIPTIAGKQAIAMESFTKALRAMPTIIADNAGYDSSELVTSLRAAHTAGQaTAGLDMYNGTVADMMELGVRESYKSKLQVLSSAAEAAEMILRVDDIIKCA 534
                  699***************7776799**************************************************************************************999888863699*******************************5453..369*******************************98.68******************998637*************************************************************************************9845.*********************..**********************************************************************************************************99999***********************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       614  (0.0449093); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.41s 00:00:01.29 Elapsed: 00:00:00.87
# Mc/sec: 1487.39
//
Query:       MMETSP1325-20131115|12233_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 512.16
//
Query:       MMETSP1325-20131115|12238_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.028   14.4   0.8      0.028   14.4   0.5    2.1  2  PF05294.8 Scorpion short toxin


Domain annotation for each model (and alignments):
>> PF05294.8  Scorpion short toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2     0.061   8.4e+02      18      21 ..      21      24 ..      19      27 .. 0.79
   2 ?   14.4   0.5   2.1e-06     0.028       3      23 ..      37      57 ..      35      66 .. 0.82

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.061
    PF05294.8 18 CCgg 21
                 CCg 
  MMETSP1325-20131115|12238_1 21 CCGT 24
                 9996 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 2.1e-06
    PF05294.8  3 PCFTTdpqmeakCreCCggrg 23
                 P  TT p  ++ C +CC +r 
  MMETSP1325-20131115|12238_1 37 PVPTTPPTESEICDKCCSRRR 57
                 556999*99*********994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|12242_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|12243_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-14   51.8   3.1    5.7e-14   51.6   2.2    1.0  1  PF01061.19 ABC-2 type transporter
    2.6e-07   29.8   3.5    3.1e-07   29.6   2.4    1.0  1  PF12698.2  ABC-2 family transporter protein
     0.0014   17.4   0.5     0.0015   17.3   0.4    1.0  1  PF12679.2  ABC-2 family transporter protein
  ------ inclusion threshold ------
      0.043   12.8   1.7      0.047   12.7   1.2    1.0  1  PF12730.2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> PF01061.19  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   2.2   1.7e-17   5.7e-14     126     203 ..      13      89 ..       4      93 .. 0.92

  Alignments for each domain:
  == domain 1    score: 51.6 bits;  conditional E-value: 1.7e-17
   PF01061.19 126 dlsfflflllllltalfasslgllisalapsfedasqlasllllpllllsGvfipldsmpkwlqwiyylnPltyavea 203
                   + f  ++l+++lta +++s+g++++al+++ ++a +++++l+lpl +++G +++ d++p++++w+  +++++y++ a
  MMETSP1325-20131115|12243_1  13 GV-FCEVVLITVLTANASVSMGYAVGALCRTPQVALAVGPALMLPLAIFGGLLMNSDAVPPYWKWLEVFSFFKYGFHA 89 
                  34.7889****************************************************66**************987 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   2.4   8.9e-11   3.1e-07     235     304 ..      12      83 ..       6      87 .. 0.81

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 8.9e-11
    PF12698.2 235 fgnlllllllfllfglayialgyllsslfksestaqlvisililllsgfflglfpleslpsflkw..ifsii 304
                  fg +  ++l+ +l + a++++gy++++l++++  a++v ++l+l+l +f ++l+  ++ p ++kw  +fs++
  MMETSP1325-20131115|12243_1  12 FGVFCEVVLITVLTANASVSMGYAVGALCRTPQVALAVGPALMLPLAIFGGLLMNSDAVPPYWKWleVFSFF 83 
                  34445578************************************6666666667688899999985556654 PP

>> PF12679.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.4   4.4e-07    0.0015     150     212 ..      11      70 ..       2      90 .. 0.71

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 4.4e-07
    PF12679.2 150 algdlllllllsvllllavlvflalgllvSsvlkssstaaaaalvllfllsllspilvlgiak 212
                  ++g +  ++l +vl++    + +++g++v+++ ++  +a+a++ +l++ l++++++l    a 
  MMETSP1325-20131115|12243_1  11 DFGVFCEVVLITVLTAN---ASVSMGYAVGALCRTPQVALAVGPALMLPLAIFGGLLMNSDAV 70 
                  55555666666666655...669*******************************999843222 PP

>> PF12730.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.2   1.4e-05     0.047     131     203 ..      10      85 ..       2      92 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.4e-05
    PF12730.2 131 llleflllllllsllvlllllli.lflsilfknslvaiiiglllillglllssllsg.syllpysy.lplivplsl 203
                  + ++++  ++l+++l++ + +++ +++++l++++ va+++g +l+l   ++++ll++ + + py + l  ++ +++
  MMETSP1325-20131115|12243_1  10 TDFGVFCEVVLITVLTANASVSMgYAVGALCRTPQVALAVGPALMLPLAIFGGLLMNsDAVPPYWKwLEVFSFFKY 85 
                  456778899999999999999999***************9999999888888888886555555433555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 441.68
//
Query:       MMETSP1325-20131115|12247_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-14   52.1  15.0    3.4e-08   32.5   2.0    4.2  4  PF00132.19 Bacterial transferase hexapeptide (six repeats)
     0.0018   17.9   0.9     0.0024   17.5   0.6    1.2  1  PF13229.1  Right handed beta helix region
  ------ inclusion threshold ------
      0.018   14.9   2.0      0.018   14.9   1.4    2.0  2  PF03895.10 YadA-like C-terminal region
      0.051   12.0   0.3      0.067   11.6   0.2    1.3  1  PF07959.7  L-fucokinase
      0.065   12.7   0.0        2.1    7.9   0.0    2.4  2  PF06394.8  Pepsin inhibitor-3-like repeated domain


Domain annotation for each model (and alignments):
>> PF00132.19  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00015      0.41       4      36 .]      62      94 ..      60      94 .. 0.92
   2 !    6.0   0.2    0.0028       7.7      20      35 ..      99     114 ..      96     115 .. 0.77
   3 !   32.5   2.0   1.2e-11   3.4e-08       2      35 ..     121     153 ..     120     154 .. 0.95
   4 !   28.7   1.9   1.9e-10   5.3e-07       1      35 [.     137     171 ..     137     172 .. 0.96

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00015
                 E-TTEEE-TTEEEESSEBE-TTEEE-TTEEEES CS
   PF00132.19  4 IGenvlIgpnvvigggviIGdnviIgagvvigg 36
                 + +++++ p + i+g+v + d + +  g+v++g
  MMETSP1325-20131115|12247_1 62 VAPDAFVAPSASIIGDVAVADKASVYYGAVLRG 94
                 56799*************************986 PP

  == domain 2    score: 6.0 bits;  conditional E-value: 0.0028
                  EBE-TTEEE-TTEEEE CS
   PF00132.19  20 viIGdnviIgagvvig 35 
                  + IG+++ ++ +vv++
  MMETSP1325-20131115|12247_1  99 ISIGAGTNVQDNVVVK 114
                  6788888888888885 PP

  == domain 3    score: 32.5 bits;  conditional E-value: 1.2e-11
                  EEE-TTEEE-TTEEEESSEBE-TTEEE-TTEEEE CS
   PF00132.19   2 tvIGenvlIgpnvvigggviIGdnviIgagvvig 35 
                  t IG +v+Ig+n+v + g+++Gdn+ Ig g+v+ 
  MMETSP1325-20131115|12247_1 121 TEIGADVTIGHNAV-LTGCTVGDNTLIGMGAVVS 153
                  89************.9****************96 PP

  == domain 4    score: 28.7 bits;  conditional E-value: 1.9e-10
                  CEEE-TTEEE-TTEEEESSEBE-TTEEE-TTEEEE CS
   PF00132.19   1 gtvIGenvlIgpnvvigggviIGdnviIgagvvig 35 
                  g+++G+n+lIg+++v+ +g++I  n+ ++ag+v+ 
  MMETSP1325-20131115|12247_1 137 GCTVGDNTLIGMGAVVSAGATIEGNAFVAAGAVVE 171
                  699******************************96 PP

>> PF13229.1  Right handed beta helix region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.6   8.9e-07    0.0024      48     111 ..      99     165 ..      69     180 .. 0.58

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 8.9e-07
    PF13229.1  48 iyiqns...snntisgnyienns.ggiklsgssnntienntitnnggaGiylnynssnntitnNtisn 111
                  i+i  +   ++n +   + + ++ +g  ++ ++n +++++t+ +n+  G+    +s+++ti++N +  
  MMETSP1325-20131115|12247_1  99 ISIGAGtnvQDNVVVKTTATYSTeIGADVTIGHNAVLTGCTVGDNTLIGMGAV-VSAGATIEGNAFVA 165
                  22221111122333333333333677777777777777777777777777444.47777777777644 PP

>> PF03895.10  YadA-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   1.4   6.6e-06     0.018      24      73 ..      81     130 ..      68     135 .. 0.81
   2 ?   -2.0   0.3       1.2   3.3e+03      32      37 ..     154     159 ..     138     173 .. 0.52

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 6.6e-06
   PF03895.10  24 pgklsvgaGvGtykgesAvAvGasarvnekvvvklgvstsssgdvgagaG 73 
                  + k sv  G+   ++ s++++Ga+ +v+++vvvk+++++s++  + + +G
  MMETSP1325-20131115|12247_1  81 ADKASVYYGAVLRGDASSISIGAGTNVQDNVVVKTTATYSTEIGADVTIG 130
                  567777778888899***********************977766666665 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.2
   PF03895.10  32 GvGtyk 37 
                  +++t +
  MMETSP1325-20131115|12247_1 154 AGATIE 159
                  222222 PP

>> PF07959.7  L-fucokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   2.5e-05     0.067     270     326 ..     106     162 ..      71     179 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 2.5e-05
    PF07959.7 270 aieveliaatsvilsslleskvsvgedsvvedsrlggevriGsqcivsgvdiaekea 326
                  +++ + + +t+   s+++ + v +g + v+  +++g++  iG + +vs+  + e +a
  MMETSP1325-20131115|12247_1 106 NVQDNVVVKTTATYSTEIGADVTIGHNAVLTGCTVGDNTLIGMGAVVSAGATIEGNA 162
                  5556778999*************************************9766655554 PP

>> PF06394.8  Pepsin inhibitor-3-like repeated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.2     0.065   1.8e+02      19      30 ..     134     145 ..     123     153 .. 0.83
   2 ?    7.9   0.0   0.00076       2.1      16      51 ..     167     203 ..     160     210 .. 0.81

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.065
    PF06394.8  19 gfdGCvVqgnkl 30 
                  + +GC V +n l
  MMETSP1325-20131115|12247_1 134 VLTGCTVGDNTL 145
                  679******987 PP

  == domain 2    score: 7.9 bits;  conditional E-value: 0.00076
    PF06394.8  16 gqggfdGCvVqgnklyvng..fyvRdLtsseqeeLktf 51 
                  g+ + +G vV   ++++++  ++++dLt++e++ L+ +
  MMETSP1325-20131115|12247_1 167 GAVVEAGTVVPAKEMWAGQpaKKLKDLTPDEISKLT-Y 203
                  777888999999999999865799**********96.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.37s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1009.23
//
Query:       MMETSP1325-20131115|12259_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 437.60
//
Query:       MMETSP1325-20131115|12260_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-23   81.0   1.4    8.6e-07   28.5   0.0    4.3  4  PF13418.1  Galactose oxidase, central domain
    1.8e-20   72.4  13.5    3.7e-06   26.8   0.1    5.0  5  PF13415.1  Galactose oxidase, central domain
      5e-20   70.8   0.0    1.5e-05   24.7   0.0    4.2  4  PF13854.1  Kelch motif
    3.7e-09   35.8   0.1      0.017   14.5   0.0    3.6  4  PF01344.20 Kelch motif
    4.4e-09   35.9   1.7      0.011   15.6   0.0    4.2  4  PF07646.10 Kelch motif
    1.9e-08   33.9   0.7     0.0038   17.2   0.0    3.8  4  PF13964.1  Kelch motif


Domain annotation for each model (and alignments):
>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   3.8e-10   8.6e-07       1      48 [.      14      68 ..      14      69 .. 0.89
   2 !   22.0   0.1   3.9e-08   8.8e-05      14      49 .]      93     129 ..      87     129 .. 0.91
   3 !   15.3   0.0     5e-06     0.011       1      35 [.     130     162 ..     130     164 .. 0.86
   4 !   11.4   0.0   8.2e-05      0.19       1      25 [.     179     203 ..     179     211 .. 0.84

  Alignments for each domain:
  == domain 1    score: 28.5 bits;  conditional E-value: 3.8e-10
    PF13418.1  1 pRaghsavavpdgrlylfGGenedggplnDlyvf...DlstntWtrl.....pslP 48
                 +R +hsa+ v    +++fGG++e+  plnD++v+   Dls   W+ +     p++P
  MMETSP1325-20131115|12260_1 14 ARNSHSATMVSPECMVVFGGASES-APLNDVHVLalgDLSAPVWQAVqcqglPPAP 68
                 799*******8778*********9.7********99********888776667766 PP

  == domain 2    score: 22.0 bits;  conditional E-value: 3.9e-08
    PF13418.1  14 rlylfGGenedggplnDlyvfDlstntWtrl.pslPs 49 
                  ++++ GG+ e+g +l D++ + +st tWt+   ++P+
  MMETSP1325-20131115|12260_1  93 SILVLGGRVESGEVLADAWSLTPSTWTWTKSgHTMPT 129
                  6899**************************9768885 PP

  == domain 3    score: 15.3 bits;  conditional E-value: 5e-06
    PF13418.1   1 pRaghsavavpdgrlylfGGenedggplnDlyvfD 35 
                  pR+ h+a  v d  +++fGG+++ g +  Dl  +D
  MMETSP1325-20131115|12260_1 130 PRCAHVAEVV-DSQVVVFGGIDGAG-LPTDLMALD 162
                  8*********.68**********75.888876555 PP

  == domain 4    score: 11.4 bits;  conditional E-value: 8.2e-05
    PF13418.1   1 pRaghsavavpdgrlylfGGenedg 25 
                  +R+gh++ a ++ ++++fGG++   
  MMETSP1325-20131115|12260_1 179 ARFGHASAAAKSVGMLIFGGISLTE 203
                  7*********9999*******9874 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.4    0.0048        11      32      47 ..       6      21 ..       1      23 [. 0.77
   2 !   26.4   0.0   2.2e-09     5e-06       4      47 ..      28      75 ..      26      77 .. 0.88
   3 !   26.8   0.1   1.6e-09   3.7e-06       3      45 ..      93     135 ..      91     136 .. 0.92
   4 !   17.9   0.1   9.9e-07    0.0023       3      48 ..     142     187 ..     140     188 .. 0.87
   5 ?    1.2   0.0      0.17   3.9e+02       4      23 ..     193     210 ..     192     212 .. 0.72

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0048
    PF13415.1 32 eeigslPppRaghtat 47
                 +++g+ P++R +h+at
  MMETSP1325-20131115|12260_1  6 APSGPVPTARNSHSAT 21
                 355999********98 PP

  == domain 2    score: 26.4 bits;  conditional E-value: 2.2e-09
    PF13415.1  4 lyvfGGlgddgqtrlndvyvl...dldtntwe..eigslPp.pRaghtat 47
                 ++vfGG      ++lndv+vl   dl+++ w+  ++  lPp pR +htat
  MMETSP1325-20131115|12260_1 28 MVVFGGAS--ESAPLNDVHVLalgDLSAPVWQavQCQGLPPaPREMHTAT 75
                 99******..79*********99999******6666777777*******9 PP

  == domain 3    score: 26.8 bits;  conditional E-value: 1.6e-09
    PF13415.1   3 elyvfGGlgddgqtrlndvyvldldtntweeigs.lPppRaght 45 
                  +++v GG+  ++++ l+d + l ++t+tw+++g+ +P+pR+ h 
  MMETSP1325-20131115|12260_1  93 SILVLGGRV-ESGEVLADAWSLTPSTWTWTKSGHtMPTPRCAHV 135
                  58999****.89********************8868*****995 PP

  == domain 4    score: 17.9 bits;  conditional E-value: 9.9e-07
    PF13415.1   3 elyvfGGlgddgqtrlndvyvldl.dtntweeigs.lPppRaghtata 48 
                   ++vfGG +  g+    d+  ld    +  e +g+  Pp+R gh+++a
  MMETSP1325-20131115|12260_1 142 QVVVFGGID--GAGLPTDLMALDDaGWGPVEVTGNaTPPARFGHASAA 187
                  589******..99999******995667***99773699******997 PP

  == domain 5    score: 1.2 bits;  conditional E-value: 0.17
    PF13415.1   4 lyvfGGlgddgqtrlndvyv 23 
                  +++fGG     ++ l d++ 
  MMETSP1325-20131115|12260_1 193 MLIFGGIS--LTEDLLDTWS 210
                  89****88..4666677775 PP

>> PF13854.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   6.5e-09   1.5e-05       1      37 [.      11      46 ..      11      51 .. 0.93
   2 !   10.8   0.0   0.00015      0.33       1      40 [.      65     116 ..      65     118 .. 0.73
   3 !   15.2   0.0   6.3e-06     0.014       1      26 [.     127     153 ..     127     164 .. 0.83
   4 !   15.3   0.0   5.8e-06     0.013       1      34 [.     176     209 ..     176     211 .. 0.89

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 6.5e-09
    PF13854.1  1 lPppRarhcavvvs.gniylyGGksgnddsvsddvyvL 37
                 +P++R +h+a +vs + + ++GG s  ++ +++dv+vL
  MMETSP1325-20131115|12260_1 11 VPTARNSHSATMVSpECMVVFGGAS--ESAPLNDVHVL 46
                 6************8678********..9*********9 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 0.00015
    PF13854.1   1 lPppRarhcavvv...sg..........niylyGGksgnddsvsddvyvLslp 40 
                  +P+pR  h a  +   +           +i++ GG++  +++v+ d++ L++ 
  MMETSP1325-20131115|12260_1  65 PPAPREMHTATLWpvvEAeaaesaaqtpSILVLGGRV-ESGEVLADAWSLTPS 116
                  5999******9553333212333455557********.89********88765 PP

  == domain 3    score: 15.2 bits;  conditional E-value: 6.3e-06
    PF13854.1   1 lPppRarhcavvvsgniylyGGksg.n 26 
                  +P+pR  h a vv++++ ++GG +g +
  MMETSP1325-20131115|12260_1 127 MPTPRCAHVAEVVDSQVVVFGGIDGaG 153
                  7***********************741 PP

  == domain 4    score: 15.3 bits;  conditional E-value: 5.8e-06
    PF13854.1   1 lPppRarhcavvvsgn.iylyGGksgnddsvsddv 34 
                  +Pp+R++h+++++++  ++++GG s+ +++++d +
  MMETSP1325-20131115|12260_1 176 TPPARFGHASAAAKSVgMLIFGGISL-TEDLLDTW 209
                  5**************88********9.88887765 PP

>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0041       9.3       3      32 ..      17      45 ..      15      46 .. 0.88
   2 !   11.5   0.0   6.5e-05      0.15      14      42 ..      94     122 ..      87     124 .. 0.95
   3 !   14.5   0.0   7.6e-06     0.017       1      23 [.     130     157 ..     130     164 .. 0.80
   4 ?   -3.9   0.0       4.1   9.4e+03      15      21 ..     194     200 ..     193     203 .. 0.78

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0041
                 SCEEEEEETTEEEEE---BSTTS-TTEEEE CS
   PF01344.20  3 ssagvvvldgkiYviGGrdgdtnalnsVer 32
                 s+ +  v   ++ v+GG ++ + +ln+V +
  MMETSP1325-20131115|12260_1 17 SHSATMVSPECMVVFGGASE-SAPLNDVHV 45
                 78888999999*********.******976 PP

  == domain 2    score: 11.5 bits;  conditional E-value: 6.5e-05
                  EEEE---BSTTS-TTEEEEEETTTTEEEE CS
   PF01344.20  14 iYviGGrdgdtnalnsVerYDpvtntWek 42 
                  i v GGr +++++l + + + p t tW+k
  MMETSP1325-20131115|12260_1  94 ILVLGGRVESGEVLADAWSLTPSTWTWTK 122
                  89*************************97 PP

  == domain 3    score: 14.5 bits;  conditional E-value: 7.6e-06
                  SSSCEEEEEETTEEEEE---BS.....T CS
   PF01344.20   1 arssagvvvldgkiYviGGrdg.....d 23 
                  +r+ + + v+d ++ v+GG+dg     d
  MMETSP1325-20131115|12260_1 130 PRCAHVAEVVDSQVVVFGGIDGaglptD 157
                  8********************9444443 PP

  == domain 4    score: -3.9 bits;  conditional E-value: 4.1
                  EEE---B CS
   PF01344.20  15 YviGGrd 21 
                   ++GG++
  MMETSP1325-20131115|12260_1 194 LIFGGIS 200
                  5899975 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0013       2.9       2      37 ..      15      51 ..      14      63 .. 0.61
   2 !    7.0   0.1    0.0026       5.9      14      44 ..      94     122 ..      93     124 .. 0.94
   3 !   15.6   0.0   4.8e-06     0.011       1      39 [.     130     165 ..     130     167 .. 0.92
   4 ?    1.8   0.0      0.12   2.6e+02       2      20 ..     180     199 ..     179     213 .. 0.63

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0013
   PF07646.10  2 ryghsav.vpggkiyvvGGahtdngllsssdlnvldp 37
                 r +hsa+ v+  +++v+GGa ++ +l +  +l + d+
  MMETSP1325-20131115|12260_1 15 RNSHSATmVSPECMVVFGGASESAPLNDVHVLALGDL 51
                 667777756699********33333333333333444 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0026
   PF07646.10  14 iyvvGGahtdngllsssdlnvldpeknvWee 44 
                  i+v GG+   + ++++ d + l p++++W++
  MMETSP1325-20131115|12260_1  94 ILVLGGR--VESGEVLADAWSLTPSTWTWTK 122
                  8999***..9*******************98 PP

  == domain 3    score: 15.6 bits;  conditional E-value: 4.8e-06
   PF07646.10   1 pryghsavvpggkiyvvGGahtdngllsssdlnvldpek 39 
                  pr+ h a v++++++v+GG+   +g+  + dl+ ld+  
  MMETSP1325-20131115|12260_1 130 PRCAHVAEVVDSQVVVFGGI---DGAGLPTDLMALDDAG 165
                  799*****************...********99999866 PP

  == domain 4    score: 1.8 bits;  conditional E-value: 0.12
   PF07646.10   2 ryghsavvp.ggkiyvvGGa 20 
                  r gh+++      ++++GG+
  MMETSP1325-20131115|12260_1 180 RFGHASAAAkSVGMLIFGGI 199
                  666666666455699****9 PP

>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0048        11       5      33 ..      18      46 ..      14      69 .. 0.74
   2 !   17.2   0.0   1.7e-06    0.0038      13      50 .]      93     131 ..      86     131 .. 0.90
   3 !    8.7   0.1   0.00081       1.8       1      22 [.     130     151 ..     130     163 .. 0.87
   4 ?   -1.4   0.0       1.3   2.9e+03       4      22 ..     182     201 ..     179     210 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0048
    PF13964.1  5 hsavsvg.gkiyifGGytnsgkylndvlvy 33
                 hsa+ v  +  ++fGG++  + +lndv+v+
  MMETSP1325-20131115|12260_1 18 HSATMVSpECMVVFGGASE-SAPLNDVHVL 46
                 555444413679******9.8******997 PP

  == domain 2    score: 17.2 bits;  conditional E-value: 1.7e-06
    PF13964.1  13 kiyifGGytnsgkylndvlvydpetksWeqlp.plpvpr 50 
                  +i ++GG++ sg+ l d + + p+t++W++ + ++p+pr
  MMETSP1325-20131115|12260_1  93 SILVLGGRVESGEVLADAWSLTPSTWTWTKSGhTMPTPR 131
                  799**************************9666999998 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.00081
    PF13964.1   1 praghsavsvggkiyifGGytn 22 
                  pr++h a +v++++++fGG ++
  MMETSP1325-20131115|12260_1 130 PRCAHVAEVVDSQVVVFGGIDG 151
                  799****************876 PP

  == domain 4    score: -1.4 bits;  conditional E-value: 1.3
    PF13964.1   4 ghsavsvgg.kiyifGGytn 22 
                  gh+++++ + +  ifGG + 
  MMETSP1325-20131115|12260_1 182 GHASAAAKSvGMLIFGGISL 201
                  56666666666789999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 1091.11
//
Query:       MMETSP1325-20131115|12263_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|12269_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.43s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 281.11
//
Query:       MMETSP1325-20131115|12268_1  [L=631]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-11   43.4   4.5    1.8e-11   43.4   3.1    1.8  2  PF13639.1  Ring finger domain
    1.6e-09   37.2   6.3    1.6e-09   37.2   4.4    1.6  2  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    1.7e-07   30.6   4.8    1.7e-07   30.6   3.3    1.8  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
      3e-06   27.1   0.6    8.2e-06   25.7   0.4    1.7  1  PF12678.2  RING-H2 zinc finger
      1e-05   24.8   1.1    2.3e-05   23.7   0.8    1.6  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    0.00024   20.5   3.3    0.00024   20.5   2.3    2.0  2  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    0.00098   18.4   1.3      0.002   17.4   0.9    1.6  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       2.1   4.1e+03      39      43 ..      57      61 ..      30      63 .. 0.67
   2 !   43.4   3.1   9.2e-15   1.8e-11       2      41 ..     306     349 ..     305     350 .. 0.92

  Alignments for each domain:
  == domain 1    score: -2.5 bits;  conditional E-value: 2.1
    PF13639.1 39 sCPlC 43
                  CP C
  MMETSP1325-20131115|12268_1 57 ACPRC 61
                 68887 PP

  == domain 2    score: 43.4 bits;  conditional E-value: 9.2e-15
    PF13639.1   2 eCaiCldelse...geevvrlpCgHvfHeeCldewlrss.nsCP 41 
                  +C iCl+++ e   + e++rlpC+H++++eC+d+wl+ss  +CP
  MMETSP1325-20131115|12268_1 306 KCLICLEPFAEmeqDYELRRLPCQHMYCKECIDQWLTSSsVKCP 349
                  7********8899999********************99736**9 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.3         7   1.4e+04      41      44 ..      58      61 ..      45      62 .. 0.68
   2 !   37.2   4.4   8.3e-13   1.6e-09       3      42 ..     305     349 ..     303     353 .. 0.92

  Alignments for each domain:
  == domain 1    score: -4.3 bits;  conditional E-value: 7
    PF13923.1 41 CPiC 44
                 CP C
  MMETSP1325-20131115|12268_1 58 CPRC 61
                 7766 PP

  == domain 2    score: 37.2 bits;  conditional E-value: 8.3e-13
    PF13923.1   3 fsCpiCleelen.....pviltpCgHlyCkkCieqwlekskkkCP 42 
                   +C iCle + +      +  +pC+H+yCk+Ci+qwl++s+ kCP
  MMETSP1325-20131115|12268_1 305 GKCLICLEPFAEmeqdyELRRLPCQHMYCKECIDQWLTSSSVKCP 349
                  69********88899**7778******************999**9 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.9       5.1     1e+04      37      41 .]      57      61 ..      50      61 .. 0.75
   2 !   30.6   3.3   8.5e-11   1.7e-07       1      39 [.     307     349 ..     307     350 .. 0.96

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 5.1
                 --TTT CS
   PF00097.20 37 kCPlC 41
                  CP C
  MMETSP1325-20131115|12268_1 57 ACPRC 61
                 49999 PP

  == domain 2    score: 30.6 bits;  conditional E-value: 8.5e-11
                  -TTTSSS-SSEE......BSCTS-EE-CHHHHHHHCST-----T CS
   PF00097.20   1 CpiCleeakepn.....elleCkHsfCskCirkilksrkkvkCP 39 
                  C iCle ++e       + l+C+H +C++Ci+++l  +++vkCP
  MMETSP1325-20131115|12268_1 307 CLICLEPFAEMEqdyelRRLPCQHMYCKECIDQWLT-SSSVKCP 349
                  99******999999*999******************.******9 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.4   4.2e-09   8.2e-06      15      72 ..     300     349 ..     283     350 .. 0.76

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 4.2e-09
    PF12678.2  15 wdisednCaiCrneleelcpeckapgksdecpvawgeCgHaFHlhCiskWlktrk.tCP 72 
                    +s+ +C+iC +++ e       +   ++ ++    C+H + ++Ci +Wl++++ +CP
  MMETSP1325-20131115|12268_1 300 AAASSGKCLICLEPFAEM------E---QDYELRRLPCQHMYCKECIDQWLTSSSvKCP 349
                  4455678********333......3...366776678**************99998999 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.8   1.2e-08   2.3e-05      13      57 ..     307     349 ..     299     350 .. 0.79

  Alignments for each domain:
  == domain 1    score: 23.7 bits;  conditional E-value: 1.2e-08
                  -TTT-S.-SS......EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
    PF13445.1  13 Cpiske.qsteqnp..PvvLpCGhvisrealeklakggrsnkgrfkCP 57 
                  C i+ e + + +++    +LpC+h +++e++ +++  +    + +kCP
  MMETSP1325-20131115|12268_1 307 CLICLEpFAEMEQDyeLRRLPCQHMYCKECIDQWLT-S----SSVKCP 349
                  8888888844444444789****************8.3....38***9 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2       1.1   2.1e+03      24      30 ..      56      62 ..      50      68 .. 0.62
   2 !   20.5   2.3   1.2e-07   0.00024       2      41 ..     304     349 ..     303     350 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.7 bits;  conditional E-value: 1.1
    PF13920.1 24 clCeeCa 30
                 c+C  C 
  MMETSP1325-20131115|12268_1 56 CACPRCD 62
                 4555554 PP

  == domain 2    score: 20.5 bits;  conditional E-value: 1.2e-07
    PF13920.1   2 kktCvvCle......readvlllpCgHlclCeeCaerllk.rkkkCp 41 
                  + +C +Cle      ++ +   lpC+H+  C+eC +++l  ++ kCp
  MMETSP1325-20131115|12268_1 304 SGKCLICLEpfaemeQDYELRRLPCQHM-YCKECIDQWLTsSSVKCP 349
                  579******54443335558999*****.********9977999999 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.9     1e-06     0.002       9      56 ..     302     353 ..     291     354 .. 0.80

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 1e-06
                  XXX-B-TTT-SB-SSEEEES......----EEEHHHHHHHHTTT--B------- CS
    PF11789.3   9 rislkCpltlkpfkePvtsk......kCnHvFEkeaIlkmlkrkkkvkCPvaGC 56 
                  + s kC + l+pf e + +        C+H++ ke I + l ++ +vkCP  GC
  MMETSP1325-20131115|12268_1 302 ASSGKCLICLEPFAE-MEQDyelrrlPCQHMYCKECIDQWL-TSSSVKCPDLGC 353
                  567789999999877.33334677889**************.99*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       919  (0.0672177); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.04u 0.37s 00:00:01.41 Elapsed: 00:00:00.57
# Mc/sec: 2607.07
//
Query:       MMETSP1325-20131115|12274_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.09   11.3   0.0       0.09   11.3   0.0    1.0  1  PF12777.2 Microtubule-binding stalk of dynein motor
       0.12   11.7   0.0       0.14   11.5   0.0    1.1  1  PF10778.4 Halocarboxylic acid dehydrogenase DehI


Domain annotation for each model (and alignments):
>> PF12777.2  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.3e-05      0.09     153     191 ..      33      71 ..      10      72 .] 0.78

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.3e-05
    PF12777.2 153 dafldslinfdkenihenclkaikeylndpefepefiks 191
                  da+  +  + d   ++ + + a+++yl+  ef+pe +k+
  MMETSP1325-20131115|12274_1  33 DALKSAREKIDDGILPAANIEAVRPYLSSAEFDPEVLKA 71 
                  444444456677777888999**************9885 PP

>> PF10778.4  Halocarboxylic acid dehydrogenase DehI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     2e-05      0.14      20      70 ..      15      69 ..      11      72 .] 0.87

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2e-05
    PF10778.4 20 Wealrps....asTrefedaAdelRerseaevanslsvsnltrrLqaagyseaei 70
                 W++++++    ++ re  da ++ Re++ + +++  ++++  ++L++a ++++ +
  MMETSP1325-20131115|12274_1 15 WRRVKEVlgfpMGAREYMDALKSAREKIDDGILPAANIEAVRPYLSSAEFDPEVL 69
                 88888874444689*************************************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|12270_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-30  104.6   0.3    2.1e-30  104.0   0.2    1.3  1  PF00203.16 Ribosomal protein S19
  ------ inclusion threshold ------
      0.051   12.0   0.8      0.061   11.8   0.5    1.0  1  PF03999.7  Microtubule associated protein (MAP65/ASE1 family)
       0.12   12.5   0.2       0.16   12.1   0.2    1.2  1  PF04504.9  Protein of unknown function, DUF573


Domain annotation for each model (and alignments):
>> PF00203.16  Ribosomal protein S19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.0   0.2   4.6e-34   2.1e-30       1      81 []      48     129 ..      48     129 .. 0.98

  Alignments for each domain:
  == domain 1    score: 104.0 bits;  conditional E-value: 4.6e-34
                  ----SS----THHHHTTTSSHHHSS-.S----S-TTSB--SSG---BE-EE----EEEEB--TTG---B----S-S------ CS
   PF00203.16   1 Rslkkkpfvalkllkkakkenekkek.eviktwsRrstilPemvGstiavynGkefvpvkiteemvGhkLGEFaitrkfrkh 81 
                  R+lk+k   ++ +l+kakk+++ +e+ e +kt+ R+++i+Pem+Gs+++vynGk f+ ++i++emvGh+LGEF+it+k+++h
  MMETSP1325-20131115|12270_1  48 RGLKRKCNTLMTRLTKAKKAAAPGERpEGVKTHVRSMIIVPEMIGSVVGVYNGKVFNGIEIKPEMVGHYLGEFSITYKPVRH 129
                  899****************************************************************************998 PP

>> PF03999.7  Microtubule associated protein (MAP65/ASE1 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.5   1.3e-05     0.061     410     469 ..      11      70 ..       7      84 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.3e-05
                  HHTS--B----BHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---....XX CS
    PF03999.7 410 eegkpFLfkGeplleaiaqieaqwerhrqekqrakkrkklankeskvikalykskessvp 469
                  ++ k+F+f G++l    +  ++++ ++  + qr + ++ l+ k ++ +  l k+k+ ++p
  MMETSP1325-20131115|12270_1  11 RTFKKFMFRGVDLETLYDMSHEEFSEKINARQRRRMMRGLKRKCNTLMTRLTKAKKAAAP 70 
                  66689********9999999**********************************999988 PP

>> PF04504.9  Protein of unknown function, DUF573
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   3.4e-05      0.16      33      77 ..      22      66 ..       7      86 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.4e-05
    PF04504.9 33 didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgke 77
                 d++ +y++ +++ s k++ +q    +r LK+K ++ +++  + k+
  MMETSP1325-20131115|12270_1 22 DLETLYDMSHEEFSEKINARQRRRMMRGLKRKCNTLMTRLTKAKK 66
                 999*******************************99999544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       474  (0.0346694); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 760.58
//
Query:       MMETSP1325-20131115|12279_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 572.19
//
Query:       MMETSP1325-20131115|12282_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       370  (0.0270626); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 829.14
//
Query:       MMETSP1325-20131115|12286_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|12285_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-05   23.0   0.0    5.3e-05   22.7   0.0    1.2  1  PF01847.11 von Hippel-Lindau disease tumour suppressor protein
  ------ inclusion threshold ------
      0.049   12.8   0.4       0.35   10.1   0.0    2.0  2  PF03185.10 Calcium-activated potassium channel, beta subunit


Domain annotation for each model (and alignments):
>> PF01847.11  von Hippel-Lindau disease tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   7.7e-09   5.3e-05       4      69 ..      15      82 ..      12      99 .. 0.87

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 7.7e-09
                 -SS-------..EEEEEEEE-SSS-EEEEEE-----EEE---B------EEEEE---EEEEEE----- CS
   PF01847.11  4 pvlrsvnsre..psqvifcnrsprvvlplwlnfdgepqpypilppgtgrrihsyrghlwlfrdagthd 69
                 p lrsv +      +++f n s   v   w +  g+   y  l p   r++ s  gh w++r   t +
  MMETSP1325-20131115|12285_1 15 PNLRSVPTTPsvKCDIVFHNNSESRVKCFWADTRGKEVEYFCLAPNLTRQMSSAAGHCWVLRSERTEE 82
                 7788887653114579**********************************************988765 PP

>> PF03185.10  Calcium-activated potassium channel, beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.019   1.3e+02      36      70 ..      11      46 ..       7      60 .. 0.66
   2 ?   10.1   0.0   5.1e-05      0.35      36      75 ..      56      94 ..      52     103 .. 0.82

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.019
   PF03185.10 36 tilkpylksvqteea.tCtvlkteiteellecsftc 70
                 +++ p l+sv t+ + +C ++  +  e  ++c ++ 
  MMETSP1325-20131115|12285_1 11 SMVVPNLRSVPTTPSvKCDIVFHNNSESRVKCFWAD 46
                 677777888887776368888888888888886643 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 5.1e-05
   PF03185.10 36 tilkpylksvqteeatCtvlkteiteellecsftcgsdcr 75
                 ++ +  ++++ + +++C vl++e+tee l csf  g+d  
  MMETSP1325-20131115|12285_1 56 CLAPNLTRQMSSAAGHCWVLRSERTEE-LMCSFVAGTDPI 94
                 555667777888899************.77******9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       589  (0.0430807); expected 273.4 (0.02)
Passed bias filter:                      442  (0.0323288); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 665.11
//
Query:       MMETSP1325-20131115|12287_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 546.37
//
Query:       MMETSP1325-20131115|12288_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 645.55
//
Query:       MMETSP1325-20131115|12300_1  [L=265]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.3   0.8       0.22   10.9   0.0    1.6  2  PF08597.5 Translation initiation factor eIF3 subunit


Domain annotation for each model (and alignments):
>> PF08597.5  Translation initiation factor eIF3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1      0.45   6.1e+03      67      79 ..     105     117 ..      94     128 .. 0.49
   2 ?   10.9   0.0   1.6e-05      0.22      84     145 ..     184     253 ..     142     257 .. 0.72

  Alignments for each domain:
  == domain 1    score: -3.7 bits;  conditional E-value: 0.45
    PF08597.5  67 eekekakkekkek 79 
                  +e+ k+ +++k  
  MMETSP1325-20131115|12300_1 105 QEQVKEVQIEKVT 117
                  3333333333322 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 1.6e-05
    PF08597.5  84 k.......eeeldeedeaaekerlrkleeesDLknAadlfgglkkaltkdtdle.sldlfnpktkedFee 145
                  +       ++ +de + +  ++ l +   e DL +A d  g+l+++ t +++       f  +++ed+e+
  MMETSP1325-20131115|12300_1 184 RqrsikfaDDAVDEATLSRGRASLSRSYSEGDLDEADDGVGDLPASATPQQQPGfLTRVFSSQSREDYEA 253
                  02234565788899999999***********************87776655555055678999****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 1270.07
//
Query:       MMETSP1325-20131115|12307_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-17   61.4   0.8    5.7e-17   61.4   0.6    1.6  2  PF00538.14 linker histone H1 and H5 family
  ------ inclusion threshold ------
      0.015   15.1   0.0       0.02   14.7   0.0    1.2  1  PF07848.7  PaaX-like protein
       0.06   13.4   0.0      0.088   12.9   0.0    1.3  1  PF08672.6  Anaphase promoting complex (APC) subunit 2
        5.3    6.8  14.4        5.7    6.7  10.0    1.1  1  PF06217.7  GAGA binding protein-like family


Domain annotation for each model (and alignments):
>> PF00538.14  linker histone H1 and H5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.6   1.7e-20   5.7e-17       5      76 ..       3      66 ..       1      67 [. 0.91
   2 ?   -3.0   0.8       2.2   7.4e+03      41      41 ..      92      92 ..      77     116 .. 0.55

  Alignments for each domain:
  == domain 1    score: 61.4 bits;  conditional E-value: 1.7e-20
                 HHHHHHHHHCCTTTT----HHHHHHHHHCCTTTS--STTHHHHHHHHHHHHHH---EE---..------EES CS
   PF00538.14  5 yseMiveaikalkerkGsSvqaikKyieanykveinasnlasllklaLkkgvksGeLvqvkgtGasGsfkla 76
                 y +Mi++ai a k rkG+S  aikK+ie++y+    +   + ll++aLk++v+sG+L+q k      s+kl+
  MMETSP1325-20131115|12307_1  3 YYDMIKAAILADKSRKGTSSVAIKKFIESTYPAVTFK---QHLLRTALKSAVASGKLTQDK-----QSYKLS 66
                 899****************************855555...7899*****************.....889886 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 2.2
                 S CS
   PF00538.14 41 a 41
                 +
  MMETSP1325-20131115|12307_1 92 K 92
                 1 PP

>> PF07848.7  PaaX-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   5.9e-06      0.02      15      68 ..      17      67 ..       8      69 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 5.9e-06
                 --TTS---HHHHHHHH.S-----HHHHHHHHHHH-----EE-----....-EE-H CS
    PF07848.7 15 ephggaiwlgsLirll.aelGiserlvRaalsRlakaGwlvrekegrrsyYrLsd 68
                 ++   ++ +++ i+ +  ++ ++++l+R+al   ++ G l++ k+     Y+Ls+
  MMETSP1325-20131115|12307_1 17 RKGTSSVAIKKFIESTyPAVTFKQHLLRTALKSAVASGKLTQDKQS----YKLSA 67
                 555566777777765414789************************9....**997 PP

>> PF08672.6  Anaphase promoting complex (APC) subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.6e-05     0.088      29      60 .]      34      65 ..      24      65 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.6e-05
                 --TT--HHHH---HHHHHH---EE-----BEE CS
    PF08672.6 29 egatvsqeeLeefLdklVeegkLevvggsYkl 60
                 + +t+ q+ L+  L++ V+ gkL  + +sYkl
  MMETSP1325-20131115|12307_1 34 PAVTFKQHLLRTALKSAVASGKLTQDKQSYKL 65
                 6789***************************8 PP

>> PF06217.7  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  10.0    0.0017       5.7     126     190 ..      59     124 ..       6     125 .] 0.44

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0017
    PF06217.7 126 eeeklealpieeaaeeakekkkkkkr.qrakkpkekkakkkkkksekskkkvkkesaderskaekk 190
                  +++  +    e+++++a +kk +kk+  ++k pk+k a kkkk ++k+k  +k++++ +++ka+kk
  MMETSP1325-20131115|12307_1  59 DKQSYKLSAAEKKPPKAPKKKVVKKKaPKKKAPKKKAAPKKKKAPKKKKAAKKAPKKAPKKKAPKK 124
                  222222222233333333333333220233333333333444444444444444444455555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1252  (0.091574); expected 273.4 (0.02)
Passed bias filter:                      495  (0.0362054); expected 273.4 (0.02)
Passed Vit filter:                        92  (0.00672908); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.41s 00:00:00.95 Elapsed: 00:00:00.50
# Mc/sec: 599.09
//
Query:       MMETSP1325-20131115|12308_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.43s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 751.80
//
Query:       MMETSP1325-20131115|12313_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       493  (0.0360591); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 344.48
//
Query:       MMETSP1325-20131115|12317_1  [L=264]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-37  127.7   0.1    3.2e-37  127.5   0.1    1.1  1  PF00270.24 DEAD/DEAH box helicase
    8.6e-07   28.8   0.0    1.3e-06   28.2   0.0    1.2  1  PF04851.10 Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.5   0.1   4.7e-41   3.2e-37       2     170 ..      72     237 ..      71     240 .. 0.92

  Alignments for each domain:
  == domain 1    score: 127.5 bits;  conditional E-value: 4.7e-41
                  HHHHHHHHHHHSS-EEEEEC-TT---HHHHHHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHHHTTT.SS.EEEEETTSSBHHHHHHHHHT..-SEEEEEHHHHHHHHHHCCHHTTTEEEEEECTHHHHHCT.TTHHHHHHHHHHSHHTTTSEEEEEESS-THHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00270.24   2 piQaeaiplilgggdvlvaaeTGsGKTlaflipvlqilletlkkttikkalivaPtreLaeqtlnnlkkfkky.pklrvlliiggvalardqlsvldngvdivvgTpgrlddlvstgklnlsqvrllVlDEadrllsq.gfsdqlnqilqilcdgkrlqvivlSATlpkdv 170
                  ++Q e+ip+++ g d++++a+ G+GKT++f+++ l ++      + +  +l+++ treLa q+  ++ +f ky p++++ + +ggv+ +++q++  +n+++ivvgTpgr++dlv+++  +l +++ +VlDE+dr+l+  +++ ++++i +++ +  + qv++ SATl+k++
  MMETSP1325-20131115|12317_1  72 EVQHECIPQAVLGMDIICQAKSGMGKTAVFVLATLHQIEPV---DGEISVLVLCHTRELAYQIKGEYDRFSKYlPDMKTEVFFGGVSVKQNQATLENNTPHIVVGTPGRVLDLVNKKFMKLDKLKHFVLDECDRMLEAlDMRRDVQEIFRATPH--QKQVMMYSATLSKQI 237
                  79******99999************************9653...46889**************************************997777777*******************8656******************999999********955..58*********9765 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.0   1.9e-10   1.3e-06      30     182 ..      89     233 ..      82     235 .. 0.81

  Alignments for each domain:
  == domain 1    score: 28.2 bits;  conditional E-value: 1.9e-10
   PF04851.10  30 ivmaTGtGKTlvaasliarlar........kflflvprkelleqaleefkkfeskkiefekkniavakkdklfgeeqkkskdkeekkkkdkeiilttiqklhkaleeeeendeskseslealldefdviiiDEaHrlsakkk.yreile.....fkkafllglTATp 182
                   ++  G+GKT v     a l++         +l+l++++el  q + e+++f+         ++ ++ k ++f+   ++ +++   ++++  i++ t  ++   +++           + ++ld+ + ++ DE+ r+ +  +  r ++e      +++ ++  +AT 
  MMETSP1325-20131115|12317_1  89 CQAKSGMGKTAVFVL--ATLHQiepvdgeiSVLVLCHTRELAYQIKGEYDRFS---------KYLPDMKTEVFFGGVSVKQNQATLENNTPHIVVGTPGRVLDLVNK-----------KFMKLDKLKHFVLDECDRMLEALDmRRDVQEifratPHQKQVMMYSATL 233
                  57788********95..5555556*************************4443.........35677788899999999999999999**************99975...........4566788999******998877774444444665887788888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       550  (0.0402282); expected 273.4 (0.02)
Passed bias filter:                      478  (0.034962); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.34s 00:00:00.95 Elapsed: 00:00:00.50
# Mc/sec: 1265.28
//
Query:       MMETSP1325-20131115|12320_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-23   80.8   0.1    9.8e-23   80.7   0.1    1.0  1  PF00491.16 Arginase family


Domain annotation for each model (and alignments):
>> PF00491.16  Arginase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.1   7.2e-27   9.8e-23     183     272 ..       3      95 ..       1      97 [. 0.91

  Alignments for each domain:
  == domain 1    score: 80.7 bits;  conditional E-value: 7.2e-27
                  HHHHHHHHHHCCT.SEEEEEEEGGGS-TTTSTT--S-------HHHHHHHHHHHHHCCEB---EEE---GGGSST-....CHHHHHHHHHHHHH CS
   PF00491.16 183 avleeilealeeekdpvylsfDiDvldpavapgtgtpepgGltlrellallrelasklnvvglDvvEvnPaldeeg....eqtarlaarlvrel 272
                   v+++++e l+  ++p++ls+DiD+ldpa ap+tgt ++gGl +re++++ +++a+++ ++++D+vEvn +l  e+    ++t+++a  l++++
  MMETSP1325-20131115|12320_1   3 GVMDMAIESLG-PSRPLHLSYDIDALDPAHAPSTGTIVRGGLNFREAHYVAEAVAETGALISMDMVEVNNELGREDptagQRTTEMALVLIASA 95 
                  689*******6.668**************************************9999***************9988889988999998888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 514.96
//
Query:       MMETSP1325-20131115|12318_1  [L=421]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-13   47.7   0.4    1.2e-12   47.2   0.2    1.3  1  PF05180.7  DNL zinc finger
  ------ inclusion threshold ------
      0.018   14.2   0.1       0.05   12.7   0.0    1.8  1  PF03719.10 Ribosomal protein S5, C-terminal domain
        0.1   12.0   0.4       0.25   10.7   0.3    1.6  1  PF05207.8  CSL zinc finger


Domain annotation for each model (and alignments):
>> PF05180.7  DNL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2   0.2   2.6e-16   1.2e-12       2      58 ..     157     214 ..     156     225 .. 0.85

  Alignments for each domain:
  == domain 1    score: 47.2 bits;  conditional E-value: 2.6e-16
    PF05180.7   2 qltftCkkCgtrskkkiskqaYekGvVlvqCpgCknrHliaDnLglfk.dekeniedi 58 
                  ++++tCk+C+tr++ ++ + ++++GvV+ +C+gC ++H++aD  gl+   +++n+ + 
  MMETSP1325-20131115|12318_1 157 KMVYTCKRCETRNMLEVKRVSWNEGVVISTCQGCGVKHILADSKGLLDlTNEQNFTNA 214
                  699****************************************999874455555444 PP

>> PF03719.10  Ribosomal protein S5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.1e-05      0.05      25      71 ..     181     230 ..     179     233 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.1e-05
                  -HHHHHHHH----SEEEEEE-...---HHHHHHHHHHHHTT---HHHHHH CS
   PF03719.10  25 gavravlelaGikDvlakslg...srnpinvvkAtfeALkklrtveevaa 71 
                  g+v + ++ +G+k++la s g    +n  n+ +A+ +A+ + +tv+++ a
  MMETSP1325-20131115|12318_1 181 GVVISTCQGCGVKHILADSKGlldLTNEQNFTNAVERAVAQGETVHQINA 230
                  567778999**********9976569********************9987 PP

>> PF05207.8  CSL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3   5.6e-05      0.25      17      49 ..     158     191 ..     146     195 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 5.6e-05
                  EEEE-.----E..EEEEHHHHH--..--EEEETTTT CS
    PF05207.8  17 ftypC.rCGdk..FeiteedleegegevvvqCpsCS 49 
                   +y+C rC  +   e++ +   eg   v+ +C++C 
  MMETSP1325-20131115|12318_1 158 MVYTCkRCETRnmLEVKRVSWNEG--VVISTCQGCG 191
                  689********9999999999999..*********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       534  (0.0390579); expected 273.4 (0.02)
Passed bias filter:                      396  (0.0289643); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.59
# Mc/sec: 1709.94
//
Query:       MMETSP1325-20131115|12328_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-12   47.0   4.7    1.6e-12   46.7   3.3    1.1  1  PF00628.24 PHD-finger
     0.0081   15.7   5.0      0.011   15.3   3.4    1.2  1  PF13639.1  Ring finger domain
  ------ inclusion threshold ------
      0.055   12.6   2.5       0.23   10.7   1.7    2.0  1  PF13831.1  PHD-finger
        0.1   11.5   0.2      0.095   11.6   0.1    1.0  1  PF13206.1  Trypanosomal VSG domain
       0.13   12.1   8.2        0.4   10.6   2.8    2.2  2  PF07649.7  C1-like domain
       0.17   11.7   1.3       0.18   11.7   0.9    1.2  1  PF13832.1  PHD-zinc-finger like domain
       0.17   10.3   1.1       0.16   10.5   0.8    1.1  1  PF07227.6  Protein of unknown function (DUF1423)
       0.24   11.0   6.8        2.7    7.6   2.2    2.1  2  PF14446.1  Prokaryotic RING finger family 1


Domain annotation for each model (and alignments):
>> PF00628.24  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   3.3   9.6e-16   1.6e-12       1      49 [.      31      81 ..      31      83 .. 0.92

  Alignments for each domain:
  == domain 1    score: 46.7 bits;  conditional E-value: 9.6e-16
                 SBTTTTC.TCTTS-EEEBSSSSSEEETTTSSS-SSHHSHHST..TB-SCCCH CS
   PF00628.24  1 rCkiCge.sdeegelvlCdgCkewfHlkClglkleseekpeg..ewlCeeCk 49
                 +C +C+  +d e + + Cd+C++wfH++C+g++ +++  ++   +++C++Ck
  MMETSP1325-20131115|12328_1 31 FC-VCRTeEDPEATYIGCDRCDQWFHPECVGVTSDPAVLQSPdfSFVCPSCK 81
                 69.***9777899**********************999888799*******8 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   3.4   6.6e-06     0.011       4      44 ..      32      81 ..      30      83 .. 0.65

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 6.6e-06
    PF13639.1  4 aiCldelsegeevvrlp.CgHvfHeeCldewl.....rssn....sCPlCr 44
                 ++C +e + + + + +  C   fH eC+         +s +     CP C+
  MMETSP1325-20131115|12328_1 32 CVCRTEEDPEATYIGCDrCDQWFHPECVGVTSdpavlQS-PdfsfVCPSCK 81
                 46666654455555666699*******999753222244.24566*****8 PP

>> PF13831.1  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.7   0.00013      0.23       5      35 ..      45      80 ..      42      81 .. 0.75

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00013
    PF13831.1  5 lvCskCsvaVHasCYGvseesegee.....WlCrrC 35
                 + C++C   +H +C Gv++++   +     + C  C
  MMETSP1325-20131115|12328_1 45 IGCDRCDQWFHPECVGVTSDPAVLQspdfsFVCPSC 80
                 67***************9987643334455666666 PP

>> PF13206.1  Trypanosomal VSG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   5.6e-05     0.095     188     215 ..      16      43 ..       5      75 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5.6e-05
    PF13206.1 188 stgaknagktlandllCLCagdastgaa 215
                  + +a+n g tl + l+C+C ++++  a+
  MMETSP1325-20131115|12328_1  16 AEAASNEGGTLGKELFCVCRTEEDPEAT 43 
                  6789999**************9944444 PP

>> PF07649.7  C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.8   0.00023       0.4       5      30 .]      33      59 ..      31      59 .. 0.90
   2 ?    3.8   0.1     0.032        55      13      21 ..      72      80 ..      67      81 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00023
    PF07649.7  5 aCglpidggpfYs.CseCdFvlHeeCa 30
                 +C+++ d   +Y+ C  Cd  +H eC+
  MMETSP1325-20131115|12328_1 33 VCRTEEDPEATYIgCDRCDQWFHPECV 59
                 58888888999*99************6 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.032
    PF07649.7 13 gpfYsCseC 21
                 ++ ++C+ C
  MMETSP1325-20131115|12328_1 72 DFSFVCPSC 80
                 6999***** PP

>> PF13832.1  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.9    0.0001      0.18      59      85 ..      32      59 ..      17      81 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 0.0001
    PF13832.1 59 vlCkkk...kGaciqCskgeCktafHvtCa 85
                 ++C+++   + + i C +  C++ fH+ C 
  MMETSP1325-20131115|12328_1 32 CVCRTEedpEATYIGCDR--CDQWFHPECV 59
                 556655577899999998..*********6 PP

>> PF07227.6  Protein of unknown function (DUF1423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.8   9.2e-05      0.16     144     160 ..      42      58 ..      20      81 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 9.2e-05
    PF07227.6 144 CrWvGCDvcshWthtdC 160
                   +++GCD c  W h +C
  MMETSP1325-20131115|12328_1  42 ATYIGCDRCDQWFHPEC 58 
                  579************** PP

>> PF14446.1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.2    0.0016       2.7      10      36 ..      33      59 ..      28      63 .. 0.89
   2 ?    5.0   0.0     0.011        18      19      28 ..      72      81 ..      66      83 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0016
    PF14446.1 10 vCgkklkdkddivvCpeCgapyHreCw 36
                 vC+ +  +++  + C++C   +H eC+
  MMETSP1325-20131115|12328_1 33 VCRTEEDPEATYIGCDRCDQWFHPECV 59
                 6888888999999*************7 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.011
    PF14446.1 19 ddivvCpeCg 28
                 d ++vCp C+
  MMETSP1325-20131115|12328_1 72 DFSFVCPSCK 81
                 6689*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      250  (0.0182855); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 384.32
//
Query:       MMETSP1325-20131115|12326_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-16   58.7   0.0    5.2e-16   57.9   0.0    1.4  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    5.2e-13   48.6   0.0      8e-13   48.0   0.0    1.2  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
    4.3e-10   39.1   0.0    6.8e-10   38.5   0.0    1.2  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
  ------ inclusion threshold ------
      0.022   14.2   0.3       0.91    9.0   0.0    2.6  3  PF12668.2  Protein of unknown function (DUF3791)


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   1.5e-19   5.2e-16       1      69 [.      20      86 ..      20      87 .. 0.96

  Alignments for each domain:
  == domain 1    score: 57.9 bits;  conditional E-value: 1.5e-19
                 EEEESSTTTSSHHHHHHHHCTCTCEEEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTEBE CS
   PF00076.17  1 lfVgnLppdvteeeLkelFskfGpiesiklvrdetgrskgfafVeFeseedaekAlealngkklggrel 69
                 l+++nLp+ +t ee++++F+k+G i+ i++  +    ++g+afV +e+  da++A++ l g  + gr l
  MMETSP1325-20131115|12326_1 20 LYIRNLPFKITSEEMYDIFGKYGAIRQIRVGDK--PDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYL 86
                 8*****************************986..889**************************99975 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   2.3e-16     8e-13       1      68 [.      20      86 ..      20      86 .. 0.97

  Alignments for each domain:
  == domain 1    score: 48.0 bits;  conditional E-value: 2.3e-16
    PF14259.1  1 lyvrglppsvteedlreffspygkvegvriprnkdgrgrgfAfvefeseedAqkalkkln.lvlkgrti 68
                 ly+r+lp+++t+e+  ++f++yg++  +r+  ++d   rg+Afv +e+  dA++a+++l   ++ gr++
  MMETSP1325-20131115|12326_1 20 LYIRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPD--TRGTAFVVYEDIYDAKNAVDHLSgFNVCGRYL 86
                 79*****************************9987..9********************988******97 PP

>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0     2e-13   6.8e-10       2      55 ..      35      90 ..      35      91 .. 0.93

  Alignments for each domain:
  == domain 1    score: 38.5 bits;  conditional E-value: 2e-13
    PF13893.1  2 yklfskfGkverikifrkk..ggqAfvefdtveaArkakeylngvklygktLkvey 55
                 y++f k+G +++i++ +k   +g+Afv ++++ +A++a+ +l+g + +g+ L v y
  MMETSP1325-20131115|12326_1 35 YDIFGKYGAIRQIRVGDKPdtRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLY 90
                 79**************999*99***************************9776655 PP

>> PF12668.2  Protein of unknown function (DUF3791)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00027      0.91      16      34 ..      28      46 ..      26      48 .. 0.89
   2 ?    2.4   0.0     0.032   1.1e+02      19      39 ..      69      90 ..      67      91 .. 0.88
   3 ?   -2.0   0.0      0.74   2.5e+03       9      21 ..     110     122 ..     109     122 .. 0.84

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00027
    PF12668.2 16 gisakealnllkksgvidy 34
                 +i+++e+++++ k+g i+ 
  MMETSP1325-20131115|12326_1 28 KITSEEMYDIFGKYGAIRQ 46
                 89*************9985 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.032
    PF12668.2 19 akealnllkksgvid.yiiekY 39
                 ak a++ l+ ++v+  y+i  Y
  MMETSP1325-20131115|12326_1 69 AKNAVDHLSGFNVCGrYLIVLY 90
                 7889999***********9776 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 0.74
    PF12668.2   9 ealAeklgisake 21 
                  eal+ k ++s++e
  MMETSP1325-20131115|12326_1 110 EALKAKFNVSGEE 122
                  8899999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      424  (0.0310123); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 557.70
//
Query:       MMETSP1325-20131115|12329_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        5.6    5.4  10.7      0.049   12.2   1.2    1.8  2  PF11855.3 Protein of unknown function (DUF3375)


Domain annotation for each model (and alignments):
>> PF11855.3  Protein of unknown function (DUF3375)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   1.3     0.082   1.1e+03     318     406 ..       6      95 ..       2     120 .. 0.45
   2 ?   12.2   1.2   3.6e-06     0.049     353     430 ..     154     242 ..     140     247 .. 0.81

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.082
    PF11855.3 318 enrrvlqlLnelearalal....realaktkadtsladialaielplerpllkspakprvadlal.aeaeaevrledlaalvaqsgvdlerlrd 406
                  e+ +++++L  +   al      re  +k ka   l+d+++ +el  +r +++ p+  ++++ ++ a a+a+v ++ +aa v+ + v  ++ ++
  MMETSP1325-20131115|12329_1   6 EAAALAHRLGMAADDALNTlivqREY-RKLKANRGLSDVEAVVELT-RRVRVEVPT--HTPPAPApALATAPVATATTAAAVSLTSVSSTSSSS 95 
                  55555666655555555544554222.3333333333333333322.344444443..333333324444444444455555544444444444 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 3.6e-06
    PF11855.3 353 alaielplerpllkspa...............kprvadlalaeaeaevrledlaalvaqsgvdlerlrdairralaersqvtlaellerlPae 430
                  +l+++++l+r++ ++ a               kp +a+la+++a+ae+++++ ++l++q    +++l+++i++a+++  ++ +a+l+ +++  
  MMETSP1325-20131115|12329_1 154 GLERSSSLKRTRRSTSAkagakaavgkptaggKPGAAKLAAEQAQAEMDADKEKELARQ----MAALTGEINEAMRSGDRMNIARLMRQREQL 242
                  55666666666666666666677777777899***************************....***********************9988754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       960  (0.0702165); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.37s 00:00:01.14 Elapsed: 00:00:00.63
# Mc/sec: 1125.91
//
Query:       MMETSP1325-20131115|12332_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 337.45
//
Query:       MMETSP1325-20131115|12336_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 336.41
//
Query:       MMETSP1325-20131115|12340_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                       89  (0.00650965); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 221.55
//
Query:       MMETSP1325-20131115|12341_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        82  (0.00599766); expected 273.4 (0.02)
Passed bias filter:                       81  (0.00592452); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 249.42
//
Query:       MMETSP1325-20131115|12344_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|12345_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      256  (0.0187244); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.55
# Mc/sec: 588.20
//
Query:       MMETSP1325-20131115|12346_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-27   95.2   2.9    3.6e-27   95.0   2.0    1.0  1  PF10520.4 Kua-ubiquitin conjugating enzyme hybrid localisation domain
  ------ inclusion threshold ------
       0.12    9.2   0.0       0.11    9.3   0.0    1.0  1  PF11725.3 Pathogenicity factor


Domain annotation for each model (and alignments):
>> PF10520.4  Kua-ubiquitin conjugating enzyme hybrid localisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.0   2.0   5.2e-31   3.6e-27      97     177 ..       1      80 [.       1      81 [. 0.97

  Alignments for each domain:
  == domain 1    score: 95.0 bits;  conditional E-value: 5.2e-31
    PF10520.4  97 ltnqiHkwsHtkkklpplvrllqdlglllsrkeHrkHHrapyetnYCivtgwlNkvldkikffrklEsvvelltgvkPrad 177
                  +++++HkwsH+  k++p+vr++q+ +l +s++ H+ HH +p+e +YCi tg+ Nk ld+ +++r+lE+v++++ gv+P+++
  MMETSP1325-20131115|12346_1   1 MSQEFHKWSHN-PKPHPFVRWMQSNNLAISKETHMAHHSSPFEAHYCILTGVCNKALDEANLWRRLEAVIYKFNGVEPNCW 80 
                  79********8.779***************************************************************998 PP

>> PF11725.3  Pathogenicity factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   1.7e-05      0.11     338     406 ..      21      92 ..       2     100 .] 0.77

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 1.7e-05
    PF11725.3 338 reegkisldesqerttlelpgkahialltgi...hadsegeqlRlhddklyklnp.elavWkpleesedtafs 406
                   +++++ +++ ++ ++ + p +ah   ltg+   ++d+++ + Rl +  +yk+n  e   Wk    +e +a+s
  MMETSP1325-20131115|12346_1  21 MQSNNLAISKETHMAHHSSPFEAHYCILTGVcnkALDEANLWRRL-EAVIYKFNGvEPNCWKEEGGEELKAYS 92 
                  5789999************************98555555555555.789*****7256789966666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.63
# Mc/sec: 380.37
//
Query:       MMETSP1325-20131115|12351_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-06   25.1   0.0       0.02   14.7   0.0    2.3  2  PF00560.28 Leucine Rich Repeat
    9.2e-05   21.9   0.1       0.22   11.7   0.0    2.3  2  PF13504.1  Leucine rich repeat
    0.00017   21.1   0.0       0.47   10.5   0.0    2.2  2  PF13516.1  Leucine Rich repeat
    0.00053   19.4   0.1      0.001   18.5   0.0    1.5  2  PF12799.2  Leucine Rich repeats (2 copies)
     0.0011   18.5   0.5     0.0052   16.4   0.3    1.9  1  PF13855.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   7.4e-06      0.02       1      20 [.       4      23 ..       4      25 .. 0.85
   2 !    8.9   0.0    0.0006       1.6       2      13 ..      29      41 ..      28      59 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 7.4e-06
                 TESEEEETSSBCB.CHHHHHH CS
   PF00560.28  1 nLeeLdLsgNnlt.slppsls 20
                 +L eLdLs+N+l+  +p  ++
  MMETSP1325-20131115|12351_1  4 KLHELDLSYNRLQgPVPM-FE 23
                 699*********988887.65 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0006
                 ESEEEETSS.BCB CS
   PF00560.28  2 LeeLdLsgN.nlt 13
                 LeeL LsgN  l 
  MMETSP1325-20131115|12351_1 29 LEELKLSGNsELG 41
                 9********7776 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   8.1e-05      0.22       1      14 [.       3      16 ..       3      20 .. 0.89
   2 !    8.4   0.0     0.001       2.8       1      14 [.      27      41 ..      27      47 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 8.1e-05
    PF13504.1  1 pnLkeLdLsgnrLt 14
                 ++L eLdLs+nrL+
  MMETSP1325-20131115|12351_1  3 HKLHELDLSYNRLQ 16
                 68**********96 PP

  == domain 2    score: 8.4 bits;  conditional E-value: 0.001
    PF13504.1  1 pnLkeLdLsgnr.Lt 14
                 + L+eL Lsgn+ L 
  MMETSP1325-20131115|12351_1 27 TTLEELKLSGNSeLG 41
                 579********8775 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00017      0.47       2      14 ..       3      15 ..       2      21 .. 0.86
   2 !    9.0   0.0   0.00055       1.5       2      15 ..      27      41 ..      26      48 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00017
    PF13516.1  2 knLtsLdLsnNqi 14
                  +L +LdLs+N +
  MMETSP1325-20131115|12351_1  3 HKLHELDLSYNRL 15
                 6899*******98 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.00055
    PF13516.1  2 knLtsLdLsnNq.ig 15
                 ++L++L Ls+N  +g
  MMETSP1325-20131115|12351_1 27 TTLEELKLSGNSeLG 41
                 79*********7566 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   3.7e-07     0.001       2      35 ..       4      38 ..       3      48 .. 0.86
   2 !    5.8   0.1    0.0035       9.7       1      12 [.      27      38 ..      27      55 .. 0.71

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 3.7e-07
    PF12799.2  2 nLevLdLsnNnIkd.lppelanL.pnLktLnLsnNp 35
                 +L++LdLs+N+++  +p  + ++ + L++L Ls+N 
  MMETSP1325-20131115|12351_1  4 KLHELDLSYNRLQGpVPM-FERMaTTLEELKLSGNS 38
                 8************75888.***9558*********5 PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0035
    PF12799.2  1 tnLevLdLsnNn 12
                 t Le+L Ls+N+
  MMETSP1325-20131115|12351_1 27 TTLEELKLSGNS 38
                 568888888875 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.3   1.9e-06    0.0052      24      59 ..       2      37 ..       1      40 [. 0.59

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 1.9e-06
    PF13855.1 24 lsnLkvLdLsgnnlksispeafkgL.psLreLnLsgN 59
                 l++L++LdLs+n+l+   p +f+ + + L+eL LsgN
  MMETSP1325-20131115|12351_1  2 LHKLHELDLSYNRLQGPVP-MFERMaTTLEELKLSGN 37
                 5666666666666666555.56655234666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.72
# Mc/sec: 209.68
//
Query:       MMETSP1325-20131115|12350_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   12.5   0.0       0.19   12.0   0.0    1.4  1  PF03966.11 Trm112p-like protein


Domain annotation for each model (and alignments):
>> PF03966.11  Trm112p-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.4e-05      0.19       3      17 ..      41      55 ..      39      89 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.4e-05
                 TT-SS----TTSS-- CS
   PF03966.11  3 lllniLaCpackgpL 17
                  ll+i+aCp++k+p 
  MMETSP1325-20131115|12350_1 41 ALLDIIACPLTKSPM 55
                 79***********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 488.86
//
Query:       MMETSP1325-20131115|12360_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.63
# Mc/sec: 224.42
//
Query:       MMETSP1325-20131115|12362_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.1   5.0       0.13   12.0   3.4    1.1  1  PF13670.1 Peptidase propeptide and YPEB domain


Domain annotation for each model (and alignments):
>> PF13670.1  Peptidase propeptide and YPEB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.4   9.8e-06      0.13       4      32 ..      12      38 ..       8      47 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9.8e-06
    PF13670.1  4 lalaaallaaaAlAkddtdapkadwlsre 32
                 l++aaa++aaaA+A  +t  +++d +s +
  MMETSP1325-20131115|12362_1 12 LTVAAAAAAAAAAA--CTHDERSDDMSSA 38
                 56677777777777..9999999999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       768  (0.0561732); expected 273.4 (0.02)
Passed bias filter:                      623  (0.0455676); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.45s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 262.24
//
Query:       MMETSP1325-20131115|12367_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       383  (0.0280135); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 446.38
//
Query:       MMETSP1325-20131115|12368_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-07   29.2   0.2    1.2e-06   27.9   0.1    1.6  1  PF00085.15 Thioredoxin
    0.00086   19.1   0.1     0.0014   18.4   0.1    1.4  1  PF13899.1  Thioredoxin-like
  ------ inclusion threshold ------
       0.13   12.2   0.1       0.38   10.8   0.0    1.8  2  PF13905.1  Thioredoxin-like


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.1   2.7e-10   1.2e-06       5     101 ..      13     122 ..       9     125 .. 0.68

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 2.7e-10
                  SSHHHHHHHHHHHH.SCEEEEEE-TT---HHHHHHHHHHHHHHTT-...TSEEEEEETT..TT...HHHHHHTT--.....SSSEEEEESSSSEEEEE---.-HHHHHHHH CS
   PF00085.15   5 ltkenfeeevaksd.klvlvefyApwCGhCkalaPeyeklaeelke...kvvlakvdvd..en...kdlaseygve.....giPtlklfkngkkveevegarekeklvafl 101
                   t+e+++e ++ks+  l++++++ +wCG+C  l+P++ ++  + +e   ++ ++  +++  ++   + l+++ +++     ++P ++l+++   v++v ga +  ++ a++
  MMETSP1325-20131115|12368_1  13 ETEEAWDEWMEKSEeMLLVLDCHQDWCGQCETLQPTFLRIFMDNDEpesRLAFLSANIQvfKEkikAILPEDSQISldehgCMPFFLLIRAKAVVANVIGA-NSPSILANV 122
                  57889*****9966156677*******************99888888884444444433113211133556666653344468999999999999999998.555555554 PP

>> PF13899.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   3.1e-07    0.0014      13      80 ..      22     101 ..      12     103 .. 0.73

  Alignments for each domain:
  == domain 1    score: 18.4 bits;  conditional E-value: 3.1e-07
    PF13899.1  13 areegkpllv.ifgadwcpdCqaldrdvlsd.eevkaalaekfvllrvdv..........terdanleldrqg.vPvvvfl 80 
                  +++++  llv + + dwc++C +l+ ++l   +++++  +++  +l +++            +d +++ld++g  P+++++
  MMETSP1325-20131115|12368_1  22 MEKSEEMLLVlDCHQDWCGQCETLQPTFLRIfMDNDE-PESRLAFLSANIqvfkekikaiLPEDSQISLDEHGcMPFFLLI 101
                  4555555555577**************9988788888.8888888888886676666666445555688888888877765 PP

>> PF13905.1  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.42   1.9e+03      42      58 ..       9      25 ..       8      30 .. 0.77
   2 ?   10.8   0.0   8.3e-05      0.38       4      55 ..      30      81 ..      27      93 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.1 bits;  conditional E-value: 0.42
    PF13905.1 42 Vsldrdeeefkkylkkn 58
                 V++ ++ee++ ++++k 
  MMETSP1325-20131115|12368_1  9 VKVIETEEAWDEWMEKS 25
                 56678899999999887 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 8.3e-05
    PF13905.1  4 vllyfaaswcppckaftpelkelyeklkaskdkveivyVsldrdeeefkkyl 55
                 ++l+ + +wc++c    p+  +++ ++ + + ++ ++  ++   +e++k++l
  MMETSP1325-20131115|12368_1 30 LVLDCHQDWCGQCETLQPTFLRIFMDNDEPESRLAFLSANIQVFKEKIKAIL 81
                 799*******************999998744455554444456666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       378  (0.0276477); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.40s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 660.22
//
Query:       MMETSP1325-20131115|12373_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.32s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 618.59
//
Query:       MMETSP1325-20131115|12374_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1013.46
//
Query:       MMETSP1325-20131115|12375_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                       88  (0.00643651); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 402.41
//
Query:       MMETSP1325-20131115|12382_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 440.76
//
Query:       MMETSP1325-20131115|12383_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   13.3   1.9      0.067   12.9   1.3    1.2  1  PF08325.5 WLM domain
        1.2    7.8   6.9        1.4    7.6   4.8    1.1  1  PF07946.9 Protein of unknown function (DUF1682)


Domain annotation for each model (and alignments):
>> PF08325.5  WLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.3   9.7e-06     0.067      96     165 ..      41     109 ..      36     138 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.7e-06
    PF08325.5  96 gnHdakFykllkelkaevaklqarGyydgflsdgkrlgdsvregkeeeeleglrlsgsperlggssssda 165
                  + H  +Fy+l  el++ +ak+q +  +++f +++kr+ +++ ++ ee++l   ++++++e+ + + +s+a
  MMETSP1325-20131115|12383_1  41 TAHATRFYSLAVELAQACAKAQSEPEEKDFFEQKKRAEEEAKRK-EEAKLAAMDPQQRQEYEDLKAKSSA 109
                  57*********************988899999999999999887.6677777777777666655444322 PP

>> PF07946.9  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   4.8    0.0002       1.4     276     316 ..      66     106 ..      31     110 .. 0.77

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0002
    PF07946.9 276 eeerqEeaqekkeekkkeereaklaklsaeeqrKleeKerk 316
                  ee+   e+++++ee+ k+++eakla++++++ + +e  ++k
  MMETSP1325-20131115|12383_1  66 EEKDFFEQKKRAEEEAKRKEEAKLAAMDPQQRQEYEDLKAK 106
                  33333356677777888888999********9999987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1192  (0.0871855); expected 273.4 (0.02)
Passed bias filter:                      633  (0.046299); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.43s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 652.34
//
Query:       MMETSP1325-20131115|12386_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.71   10.1   3.0       0.84    9.8   2.1    1.1  1  PF03229.8 Alphavirus glycoprotein J


Domain annotation for each model (and alignments):
>> PF03229.8  Alphavirus glycoprotein J
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.1   6.2e-05      0.84      23      86 ..      10      72 ..       3      76 .. 0.66

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 6.2e-05
    PF03229.8 23 aalatgttatvgaanaaavana.tganatsaaaastiaatvgapptdstvaaetPgpflptdfal 86
                  a+a++++   g+ ++     + ++ n+++ a a t a t ++pp+ s  aa  P +  + d a 
  MMETSP1325-20131115|12386_1 10 NAVAGDPADVNGSHSSVRRERSySSGNSAAKAKAKTKAKTKKPPPEVS--AATLPITPFTDDKAT 72
                 478888887777777744444414556666667889999999999988..555565555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|12389_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.33s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 248.68
//
Query:       MMETSP1325-20131115|12395_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.012   15.0   0.0    1.2  1  PF02213.11 GYF domain


Domain annotation for each model (and alignments):
>> PF02213.11  GYF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   8.9e-07     0.012      16      39 ..       2      25 ..       1      51 [. 0.83

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 8.9e-07
                 E-HHHHHHHHTTTSS-S--EEEE- CS
   PF02213.11 16 FsseeMqsWykegYFqpslqvrrv 39
                 Fs++++ sW ++g+F+ +  v + 
  MMETSP1325-20131115|12395_1  2 FSTAQIISWRSQGFFTGDSAVEMR 25
                 9***************98766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.72
# Mc/sec: 199.70
//
Query:       MMETSP1325-20131115|12402_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 292.89
//
Query:       MMETSP1325-20131115|12397_1  [L=410]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-66  221.4   0.0      1e-65  220.9   0.0    1.1  1  PF01747.12 ATP-sulfurylase
    1.6e-42  144.5   0.0    2.3e-42  143.9   0.0    1.2  1  PF14306.1  PUA-like domain


Domain annotation for each model (and alignments):
>> PF01747.12  ATP-sulfurylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.9   0.0   1.5e-69     1e-65       6     213 ..     195     408 ..     192     410 .] 0.94

  Alignments for each domain:
  == domain 1    score: 220.9 bits;  conditional E-value: 1.5e-69
                  --HHHHHHHHHHTT-SSEEEEEESS---HHHHHHHHHHHHH.HT-....EEEEEEB-----TTSHHHHHHHHHHHHHHHHHS-GGGEEEE-B-S-------HHHHHHHHHHHH----EEEE-------B......BSS-TTHHHHHHHHHCTTTTSEEEE---EEEETTTTEEEETCCS.STTGGGEE--HHHHHHHHH-.----TTTS-HHHHHHHHH CS
   PF01747.12   6 ltPaelRalfkekgwkkvvAfqtrnplHraHeellkaalek.lad....glllhplvgetkpgdipaevrveayeallenylppdrvvlallpldmryagpreallhaiirknyGcthfivGrdhagvg......dyYgpyeaqeifdkaakelgieivkfreaaYckkcgemasektcphgkeerlkisGtklrellreGeeppeefmrpevakvlle 213
                  +tP+e+R+++     k+vvAfq+rnp+HraH el+ +al+         ++++hp +g t+++di+ +vr+++ye+l e+ + + rv++  lp +m++agprea++h++irkn+Gcthfi+Grd+ag +      d+Yg+yeaqe  +++++elg++ v+  +++Y++++g + ++++++++  ++ ++sGtk+r++lr+Ge++pe+f +++v++vl+ 
  MMETSP1325-20131115|12397_1 195 KTPKEVREEL--PDDKDVVAFQCRNPVHRAHYELFTRALDDeR-VgeggVVMVHPTCGPTQADDIDGTVRYKTYEVLKEE-TANPRVIWNYLPYSMHMAGPREAIHHMMIRKNFGCTHFIIGRDMAGSKssldgeDFYGAYEAQEFAQSKSAELGVKCVPSLNLVYTEEKGYV-TADEAEKEGLTKKNLSGTKFRKALRAGEDIPEWFAFKSVVEVLRA 408
                  79********..99999**********************9953.2347899****************************9.7999*********************************************************************************8888877.6677766666668******************************86 PP

>> PF14306.1  PUA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.9   0.0   3.4e-46   2.3e-42       2     159 ..      37     186 ..      36     187 .. 0.95

  Alignments for each domain:
  == domain 1    score: 143.9 bits;  conditional E-value: 3.4e-46
                  SXSXXXSXXXHBHHCGGHHHHHHHHHTSXEEEEXHHHHHHHHHHHXXXXTTXXXXXXHHHHHHHHHHSBEXXXXEXXSXXXEEEEHHHHHHHXTTSEEEEEETTXEEEEEEECCEEEEXHHHHHHHHHHSXXTTTTHHHHHHH.TSXSEEEEXEEEEXS CS
    PF14306.1   2 kphggkklvelvvedeekeellkeaaelpsielskrelsdlellaeGgfsPLegFmneedyesvleemrLadgllwsiPivLdvseedakklkegdevaLkdkegevlAvleveeiyevdkeeeaekvfgttdeaHPgvkkvl.eqgevlvgGkvevln 159
                  +phgg +lv+l+ved+e++ +  +    ++++l++r+l+d+el+ +GgfsPL+gFmneedy+sv+++ +L++gll+s+P+v+d+++ed   ++ gd+++Lk++ +  +A+ ++e +y  +k  e+++++gt++ +HPg  +v  e+g+++++G++e ln
  MMETSP1325-20131115|12397_1  37 EPHGG-TLVDLFVEDKEAAIKSCN----KELQLNPRQLCDVELICNGGFSPLTGFMNEEDYLSVVNDVKLSSGLLFSLPVVFDTDDED---IAVGDKILLKQD-DLEIATFTIESKYLAQKPLECKNCYGTSSIEHPGTLMVAmEKGKYYLSGSLEGLN 186
                  7***9.********9877765554....569********************************************************9...789*********.999**********************************999************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.59
# Mc/sec: 1665.27
//
Query:       MMETSP1325-20131115|12406_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|12407_1  [L=140]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0018   17.8   0.1      0.013   15.2   0.0    2.4  3  PF00514.18 Armadillo/beta-catenin-like repeat
     0.0085   14.8   0.2       0.01   14.5   0.1    1.1  1  PF10165.4  Guanine nucleotide exchange factor synembryn
  ------ inclusion threshold ------
      0.027   12.3   0.1      0.031   12.1   0.1    1.1  1  PF05804.7  Kinesin-associated protein (KAP)


Domain annotation for each model (and alignments):
>> PF00514.18  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.85   3.9e+03      14      22 ..      19      27 ..      17      42 .. 0.58
   2 !   15.2   0.0   2.8e-06     0.013       2      23 ..      74      95 ..      73     102 .. 0.87
   3 ?   -1.4   0.0      0.47   2.1e+03       7      20 ..     125     138 ..     120     140 .] 0.71

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 0.85
                 HHHHHHHHC CS
   PF00514.18 14 vppLvqLLk 22
                 v +Lv+ L 
  MMETSP1325-20131115|12407_1 19 VSQLVDNLG 27
                 566666554 PP

  == domain 2    score: 15.2 bits;  conditional E-value: 2.8e-06
                 HHHHHHHHHCHHHHHHHHHHC- CS
   PF00514.18  2 penkqavieaGavppLvqLLks 23
                  +n + vi++G vp+L++LL++
  MMETSP1325-20131115|12407_1 74 EDNVRDVIDSGFVPKLLDLLDK 95
                 68999***************85 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.47
                  HHHHCHHHHHHHHH CS
   PF00514.18   7 avieaGavppLvqL 20 
                  ++   Ga ++L+q 
  MMETSP1325-20131115|12407_1 125 QLQGLGAPDALIQA 138
                  56667888899886 PP

>> PF10165.4  Guanine nucleotide exchange factor synembryn
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   2.2e-06      0.01     230     297 ..      24      92 ..       2     102 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 2.2e-06
    PF10165.4 230 gslapegenmdlvsrLlefLdrslekyeklkl.eetltPllllLtelaraaeevRkyikaklLPpleDr 297
                  ++l p+ +n++  + ++++L+  ++ +  ++   e+l  + +l+++l++ +++vR++i + + P+l D 
  MMETSP1325-20131115|12407_1  24 DNLGPTLQNKQHKDDIIKMLNNTVDTMPLMPVdPELLGEIASLMSTLCTDEDNVRDVIDSGFVPKLLDL 92 
                  5677889999999999999999999999999879********************************995 PP

>> PF05804.7  Kinesin-associated protein (KAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   6.8e-06     0.031     307     381 ..      18      95 ..       4     115 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.8e-06
    PF05804.7 307 lvvsflkklsifdenkdemeeldivekllk......llpiehedllkvtlklllnlsfdtklrrkmvkaGllPklvslldd 381
                  +v++++  l+   +nk++    di++ l        l+p+ +++ll  +  l+  l  d ++ r +++ G++Pkl  lld+
  MMETSP1325-20131115|12407_1  18 VVSQLVDNLGPTLQNKQHK--DDIIKMLNNtvdtmpLMPV-DPELLGEIASLMSTLCTDEDNVRDVIDSGFVPKLLDLLDK 95 
                  4555566777777777653..3344443330000004454.6788888899***************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 729.33
//
Query:       MMETSP1325-20131115|12403_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-13   49.4   0.6    7.2e-13   48.4   0.4    1.5  1  PF00189.15 Ribosomal protein S3, C-terminal domain
      2e-12   46.3   0.2    3.5e-12   45.5   0.2    1.4  1  PF07650.12 KH domain
  ------ inclusion threshold ------
      0.048   13.8   0.0      0.091   12.9   0.0    1.5  1  PF11543.3  Nuclear pore localisation protein NPL4


Domain annotation for each model (and alignments):
>> PF00189.15  Ribosomal protein S3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.4   1.6e-16   7.2e-13       2      85 .]     113     196 ..     112     196 .. 0.93

  Alignments for each domain:
  == domain 1    score: 48.4 bits;  conditional E-value: 1.6e-16
                  HHHHHHTT--HHHHHHHHHHHHHH--.----EEEE---TTS.SS---EEEE----..---HHHHSEEEEEEEE------E-EEEEE CS
   PF00189.15   2 iakqlekrisfrraikqlikklvkkkkakGikIqisGrlngaerarsekykeGkv..plqtleadIdyayseaktkyGviGikVwi 85 
                  ++++l  + ++rra++ +++ + ++++akG+++++sG+l+  +ra+ +k++ G++  ++   e ++d a++++ +++Gv+G+ V i
  MMETSP1325-20131115|12403_1 113 LKYKLIGGLAVRRACYGVLRFI-MESGAKGAEVIVSGKLRA-QRAKAMKFQDGYMikTGAVAEMYVDKAVRHVLMRQGVLGVVVEI 196
                  5677888899***********9.6667************88.****************************************9966 PP

>> PF07650.12  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.2   7.7e-16   3.5e-12       1      76 [.      28     102 ..      28     104 .. 0.95

  Alignments for each domain:
  == domain 1    score: 45.5 bits;  conditional E-value: 7.7e-16
                  HHHHHTTCCCTTE-CCCEEEEBSSSEEEEEEEESCCCCC------HHHHHHHHHHHHCHHC---EEEEEEEEESTC CS
   PF07650.12   1 eireslavelkkagisdveIertenrviiviresqpgivIGkgGsnikklgkelrkrieklegkkvklnvveVkkp 76 
                  e++e l++el+++g+++ve++ t+ r++i+ir+ + + v+G +G++i++l++ ++kr+ ++ ++ v+l+ + V ++
  MMETSP1325-20131115|12403_1  28 ELNELLTRELAEEGYAGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF-AFTDGAVELYAERVANK 102
                  67899***************99************************************.6*********9999886 PP

>> PF11543.3  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     2e-05     0.091      16      61 ..      64     109 ..      52     120 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2e-05
                  EE----SS--HHHHHHHHHHH------------S-------SS--- CS
    PF11543.3  16 kRieisekstlktllekvaeelkfsnngfslylernkttelvssss 61 
                  + +  ++   +++l + v++++ f++   +ly er  ++ l ++ +
  MMETSP1325-20131115|12403_1  64 QNVLGEKGRRIRELTSVVQKRFAFTDGAVELYAERVANKGLCAQAQ 109
                  556667788899*************************999977654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 1150.25
//
Query:       MMETSP1325-20131115|12414_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   13.8   0.9       0.05   13.7   0.6    1.3  1  PF12440.3 Melanoma associated antigen family N terminal


Domain annotation for each model (and alignments):
>> PF12440.3  Melanoma associated antigen family N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.6   3.7e-06      0.05       8      33 ..      23      48 ..       4      59 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 3.7e-06
    PF12440.3  8 rarekrrqaqgEaqglqdaqataaee 33
                 +a e ++q+++Ea   q+aq+ +a  
  MMETSP1325-20131115|12414_1 23 EATEGGHQTREEASRWQAAQEATATW 48
                 689*****************998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       411  (0.0300614); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.66
# Mc/sec: 225.11
//
Query:       MMETSP1325-20131115|12415_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 423.97
//
Query:       MMETSP1325-20131115|12416_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.5e-33  113.1   0.0    9.9e-33  112.9   0.0    1.0  1  PF03982.8 Diacylglycerol acyltransferase


Domain annotation for each model (and alignments):
>> PF03982.8  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.9   0.0   7.2e-37   9.9e-33     165     289 ..       1     128 [.       1     135 [. 0.91

  Alignments for each domain:
  == domain 1    score: 112.9 bits;  conditional E-value: 7.2e-37
    PF03982.8 165 LkkrkGfvkialktGadLvPvysfGendvykq.venpkgsklrkvqeklkkvlglsppilyGrglfnsltl.G.llPfrkpittvvGkPievtkteePtkeeidelhakYveaLaeLfeehkekfgvs 289
                  L++r Gf +ial++G +LvP+ysfGend+y q v+n  g+++r++qe   k++g + p + G g f  +++ G  +P r+pi tv+G Pie +k+e+Pt+ +i++l   Y+++L+++f ++ + +  +
  MMETSP1325-20131115|12416_1   1 LQRRSGFFRIALQQGVSLVPIYSFGENDLYPQaVTNTPGTYIRRIQEYWLKKIGYATPYFCGSGAFCMPAIpGnPIPRRHPIVTVIGDPIECPKIEHPTEADIEKLKVRYINELNNIFTQFADEYAPD 128
                  789***************************98357888*****************************99884325999******************************************99988744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       236  (0.0172616); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 683.96
//
Query:       MMETSP1325-20131115|12425_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 557.41
//
Query:       MMETSP1325-20131115|12426_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       641  (0.0468841); expected 273.4 (0.02)
Passed bias filter:                      525  (0.0383996); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 470.05
//
Query:       MMETSP1325-20131115|12430_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      107  (0.00782621); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 270.23
//
Query:       MMETSP1325-20131115|12434_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.8e-08   33.9   0.0      6e-08   33.6   0.0    1.2  1  PF04134.7 Protein of unknown function, DUF393


Domain annotation for each model (and alignments):
>> PF04134.7  Protein of unknown function, DUF393
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   4.4e-12     6e-08      32     113 .]       4      92 ..       1      92 [. 0.74

  Alignments for each domain:
  == domain 1    score: 33.6 bits;  conditional E-value: 4.4e-12
    PF04134.7  32 qsakdeellkeag...idkdqllsvlhlvergevlsgsdAalelwrklpg....llrllawllrlprirpvldavYrliarnRyrlfgr 113
                  q++++ ++l+++g   +d ++++svl+l+++g ++ +s+Aal++  +l+g     l+ la+  +  ++ p++d +Y+++ rnRy++fg+
  MMETSP1325-20131115|12434_1   4 QDDAAAKILESHGhtlPDSAEMDSVLVLTPDGVLHDRSTAALQAGAALSGpvgsVLSALAVAGMAVVPTPIMDPLYNFVGRNRYKWFGQ 92 
                  56677777777773335599999999998888899*********88888833333334444444556678*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 528.18
//
Query:       MMETSP1325-20131115|12444_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 508.70
//
Query:       MMETSP1325-20131115|12451_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.32s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|12455_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 655.33
//
Query:       MMETSP1325-20131115|12456_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        97  (0.00709479); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 244.07
//
Query:       MMETSP1325-20131115|12465_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 284.57
//
Query:       MMETSP1325-20131115|12467_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       119  (0.00870392); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.57
# Mc/sec: 123.95
//
Query:       MMETSP1325-20131115|12473_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-06   26.6   0.0    4.5e-06   26.6   0.0    1.1  1  PF12697.2  Alpha/beta hydrolase family
    0.00074   19.2   0.0    0.00074   19.2   0.0    1.1  1  PF08386.5  TAP-like protein
  ------ inclusion threshold ------
      0.013   15.2   0.0      0.016   14.8   0.0    1.1  1  PF12695.2  Alpha/beta hydrolase family
      0.013   14.9   0.0      0.013   14.9   0.0    1.0  1  PF00561.15 alpha/beta hydrolase fold
       0.13   11.2   0.0       0.13   11.2   0.0    1.0  1  PF00450.17 Serine carboxypeptidase
       0.13   11.6   0.0       0.16   11.4   0.0    1.1  1  PF06821.8  Serine hydrolase


Domain annotation for each model (and alignments):
>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0     2e-09   4.5e-06     172     219 ..       3      50 ..       1      60 [. 0.91

  Alignments for each domain:
  == domain 1    score: 26.6 bits;  conditional E-value: 2e-09
                  HTT-.-S-EEEEE-----HHHHHHHHHHHHHSTTEEEEE---SSSS-.. CS
    PF12697.2 172 larl.dvPvlviageaDrvvppeearrlaealpgarvvvlpgagHllfl 219
                  l+++ ++P+ +++g+ D v+p+  a +la++lpg++++    +gH+ f+
  MMETSP1325-20131115|12473_1   3 LEKIrHIPTVIVQGRYDVVCPATSAYELAQKLPGCTLHMTT-TGHSSFE 50 
                  677768**********************************8.***9885 PP

>> PF08386.5  TAP-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   3.3e-07   0.00074      34      76 ..       8      49 ..       1      64 [. 0.85

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 3.3e-07
    PF08386.5 34 appvLlvqnelDPatpyegakklaralggavlvtvegeGHgal 76
                  +p+ +vq+++D ++p  +a +la++l+ +  +    +GH ++
  MMETSP1325-20131115|12473_1  8 HIPTVIVQGRYDVVCPATSAYELAQKLP-GCTLHMTTTGHSSF 49
                 4899************************.78888899999876 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   6.8e-06     0.016     101     131 ..       8      38 ..       2      47 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 6.8e-06
    PF12695.2 101 tlpvllihGtrDgvvppeeaeklakalpgda 131
                  ++p+ +++G +D v+p+++a +la++lpg++
  MMETSP1325-20131115|12473_1   8 HIPTVIVQGRYDVVCPATSAYELAQKLPGCT 38 
                  68**************************874 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   5.8e-06     0.013     175     220 ..       8      52 ..       2      62 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 5.8e-06
                  TSSEEEEECCTTSCCHHCHHHHHHHCSTTEEEEEETTHHCSHHHHS CS
   PF00561.15 175 lvptlvisgtdDplvpykaseklaelipksqlvvidgpgHlafldk 220
                  ++pt++++g+ D + p   ++ la+++p   l+ + + gH +f+ +
  MMETSP1325-20131115|12473_1   8 HIPTVIVQGRYDVVCPATSAYELAQKLPGCTLHMTTT-GHSSFEPE 52 
                  79***********************************.***99865 PP

>> PF00450.17  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.8e-05      0.13     332     372 ..       8      55 ..       3      68 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 5.8e-05
                  T--EEEEE----STT-----HHHHCC.......--STTHHHHHHS--B CS
   PF00450.17 332 glrvliysGdvDlicnflgteawikk.......lnlsgkkefrpwevs 372
                  +++++i++G +D++c+ ++  ++ +k       ++ +g+++f+p   +
  MMETSP1325-20131115|12473_1   8 HIPTVIVQGRYDVVCPATSAYELAQKlpgctlhMTTTGHSSFEPEIIE 55 
                  4899**********************9999888888888888887765 PP

>> PF06821.8  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0     7e-05      0.16     113     153 ..       7      47 ..       2      53 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 7e-05
                  HHHHHEEEEETT-SSS-HHHHHHHHHHTT-EEEEE------ CS
    PF06821.8 113 lpfpslvvaSenDpyvefeeaeelaeawgaelvdlgeaGHi 153
                   ++p+++v  + D +++ ++a ela+++   ++++  +GH 
  MMETSP1325-20131115|12473_1   7 RHIPTVIVQGRYDVVCPATSAYELAQKLPGCTLHMTTTGHS 47 
                  589*************************9999999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 351.81
//
Query:       MMETSP1325-20131115|12474_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       321  (0.0234786); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 531.37
//
Query:       MMETSP1325-20131115|12475_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-15   56.3   0.0    5.9e-09   36.0   0.0    2.1  2  PF12796.2  Ankyrin repeats (3 copies)
    8.8e-14   50.4   0.0    8.2e-05   22.1   0.0    3.4  3  PF00023.25 Ankyrin repeat
    3.7e-13   49.1   0.0    5.4e-07   29.5   0.0    3.2  3  PF13857.1  Ankyrin repeats (many copies)
    8.6e-09   34.6   0.0      0.017   15.1   0.0    3.4  3  PF13606.1  Ankyrin repeat
      1e-06   29.0   0.0      0.013   15.8   0.0    3.4  4  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   2.2e-12   5.9e-09      25      89 .]       6      72 ..       1      72 [. 0.93
   2 !   24.9   0.0   6.1e-09   1.7e-05      35      88 ..      51     104 ..      49     119 .. 0.65

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 2.2e-12
    PF12796.2 25 l..getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlrd 89
                    g+tpL  +ae g+l  +++Ll  gad++  d++  t+L+   + g+ +  klL+++ga+v+l +
  MMETSP1325-20131115|12475_1  6 DqyGRTPLVRCAEIGRLPFAEALLLCGADCDLSDEHAFTALMRSSERGDSDFSKLLISYGAKVDLVN 72
                 24589**********************************************************9875 PP

  == domain 2    score: 24.9 bits;  conditional E-value: 6.1e-09
    PF12796.2  35 eagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                  e+g+ +  klL+++ga v+  +k g+++L++A++ +   ++  L+e+ga+ +l+
  MMETSP1325-20131115|12475_1  51 ERGDSDFSKLLISYGAKVDLVNKFGKSALMYAAEEKWSAAFLSLVENGASSDLT 104
                  455566666666666666666666666666666666666666666666655544 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.7e-06      0.01       1      32 [.       8      39 ..       8      40 .. 0.94
   2 !   22.1   0.0     3e-08   8.2e-05       3      33 .]      43      73 ..      41      73 .. 0.96
   3 !    9.2   0.0   0.00035      0.97       2      32 ..      75     105 ..      74     106 .. 0.91

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 3.7e-06
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                 +G+TPL  +a+ g+l  ++ Ll +GAd ++ d
  MMETSP1325-20131115|12475_1  8 YGRTPLVRCAEIGRLPFAEALLLCGADCDLSD 39
                 69*************************99766 PP

  == domain 2    score: 22.1 bits;  conditional E-value: 3e-08
                 CBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
   PF00023.25  3 fTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                 fT+L+  ++rg+ +  klL+s+GA ++++++
  MMETSP1325-20131115|12475_1 43 FTALMRSSERGDSDFSKLLISYGAKVDLVNK 73
                 8**************************9986 PP

  == domain 3    score: 9.2 bits;  conditional E-value: 0.00035
                  SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                  G ++L++Aa+         L+++GA+ +++d
  MMETSP1325-20131115|12475_1  75 GKSALMYAAEEKWSAAFLSLVENGASSDLTD 105
                  889**********************988877 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   7.3e-05       0.2      10      36 ..       3      29 ..       1      33 [. 0.90
   2 !   29.5   0.0     2e-10   5.4e-07       1      56 []      28      82 ..      28      82 .. 0.98
   3 !   16.9   0.0   1.8e-06     0.005       1      56 []      61     115 ..      61     115 .. 0.95

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 7.3e-05
    PF13857.1 10 natdeggntpLhlAakggalevvrlLl 36
                 + +d++g+tpL   a+ g+l++++ Ll
  MMETSP1325-20131115|12475_1  3 DVQDQYGRTPLVRCAEIGRLPFAEALL 29
                 57899*********************9 PP

  == domain 2    score: 29.5 bits;  conditional E-value: 2e-10
    PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                 Ll +g ad++ +de+ +t+L+   ++g++++ +lL+ +ga  +l +++g +al +A
  MMETSP1325-20131115|12475_1 28 LLLCG-ADCDLSDEHAFTALMRSSERGDSDFSKLLISYGAKVDLVNKFGKSALMYA 82
                 78899.***********************************************998 PP

  == domain 3    score: 16.9 bits;  conditional E-value: 1.8e-06
    PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56 
                  L+++g a v+  +++g ++L++Aa+   + ++  L+++ga+ +l+ds++ + +d+A
  MMETSP1325-20131115|12475_1  61 LISYG-AKVDLVNKFGKSALMYAAEEKWSAAFLSLVENGASSDLTDSNNMSSWDWA 115
                  78899.99999**************************************9999987 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.3e-06     0.017       1      29 [.       8      36 ..       8      37 .. 0.95
   2 !    8.2   0.0    0.0011         3       4      29 ..      44      69 ..      41      72 .. 0.92
   3 !    7.4   0.0     0.002       5.6       2      27 ..      75     100 ..      74     103 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 6.3e-06
    PF13606.1  1 nGnTpLhlAasngrielveaLlengadin 29
                 +G+TpL   a+ gr+ ++eaLl +gad +
  MMETSP1325-20131115|12475_1  8 YGRTPLVRCAEIGRLPFAEALLLCGADCD 36
                 8*************************965 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0011
    PF13606.1  4 TpLhlAasngrielveaLlengadin 29
                 T+L+   ++g  ++ ++L+++ga ++
  MMETSP1325-20131115|12475_1 44 TALMRSSERGDSDFSKLLISYGAKVD 69
                 9*********************9876 PP

  == domain 3    score: 7.4 bits;  conditional E-value: 0.002
    PF13606.1   2 GnTpLhlAasngrielveaLlengad 27 
                  G ++L++Aa+ +  +++  L+enga 
  MMETSP1325-20131115|12475_1  75 GKSALMYAAEEKWSAAFLSLVENGAS 100
                  789*******9988888889***985 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00048       1.3      30      54 .]       5      29 ..       2      29 .. 0.89
   2 !   15.8   0.0   4.8e-06     0.013       1      54 []       9      62 ..       9      62 .. 0.95
   3 !   12.8   0.0   4.4e-05      0.12       6      43 ..      47      84 ..      43      96 .. 0.82
   4 ?    3.3   0.0     0.041   1.1e+02       3      35 ..      77     109 ..      77     111 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00048
    PF13637.1 30 tdesGntaLhiAalrgnieilklLl 54
                 +d +G+t+L ++a++g++ +++ Ll
  MMETSP1325-20131115|12475_1  5 QDQYGRTPLVRCAEIGRLPFAEALL 29
                 5779*****************9997 PP

  == domain 2    score: 15.8 bits;  conditional E-value: 4.8e-06
    PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                 g+t+L ++a  grl+ ++ Ll  g+d++  de  +taL +  +rg+ ++ klL+
  MMETSP1325-20131115|12475_1  9 GRTPLVRCAEIGRLPFAEALLLCGADCDLSDEHAFTALMRSSERGDSDFSKLLI 62
                 689999***************77**************************99997 PP

  == domain 3    score: 12.8 bits;  conditional E-value: 4.4e-05
    PF13637.1  6 hyaaisgrlelvklLlekgidinrtdesGntaLhiAal 43
                 ++    g+ +  klL+++g+ ++ ++++G +aL +Aa+
  MMETSP1325-20131115|12475_1 47 MRSSERGDSDFSKLLISYGAKVDLVNKFGKSALMYAAE 84
                 55555556666699**********************95 PP

  == domain 4    score: 3.3 bits;  conditional E-value: 0.041
    PF13637.1   3 taLhyaaisgrlelvklLlekgidinrtdesGn 35 
                  +aL+yaa   +  +  +L+e+g++ + td++++
  MMETSP1325-20131115|12475_1  77 SALMYAAEEKWSAAFLSLVENGASSDLTDSNNM 109
                  6899999999999999*******9999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 789.39
//
Query:       MMETSP1325-20131115|12479_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 426.55
//
Query:       MMETSP1325-20131115|12476_1  [L=227]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-08   34.4   4.4    1.8e-08   33.9   3.1    1.3  1  PF03006.15 Haemolysin-III related


Domain annotation for each model (and alignments):
>> PF03006.15  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   3.1   1.3e-12   1.8e-08     138     218 ..     118     204 ..      81     208 .. 0.72

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 1.3e-12
   PF03006.15 138 lravlfllmgllgvipilhlilileslgeaa......alvllvlggvlyllGavfyatriPErlkpgk.fdivghsHqifHvfVvlga 218
                  + ++lfl ++ +  +pi + + ++ s+  a+      a++l ++g ++ ++G v+ +  +PEr++p   fd +ghsHq++H+++++g 
  MMETSP1325-20131115|12476_1 118 YTTALFLPLYAYIHVPIMY-VACTASFWTADlalfrmAVGLSLVGSMCGVVGYVLKVGCLPERYFPDGrFDLWGHSHQWWHILTIVGP 204
                  5577788888888888888.4444443334466655555666666666666666666667***999544*************999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.37s 00:00:00.86 Elapsed: 00:00:00.55
# Mc/sec: 989.04
//
Query:       MMETSP1325-20131115|12480_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0055   16.5   0.0     0.0074   16.0   0.0    1.2  1  PF13950.1 UDP-glucose 4-epimerase C-term subunit


Domain annotation for each model (and alignments):
>> PF13950.1  UDP-glucose 4-epimerase C-term subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   5.4e-07    0.0074      19      51 ..      39      71 ..      22      78 .. 0.81

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 5.4e-07
    PF13950.1 19 pGDvaecyAdpskAekeLgWkaersleemcrDa 51
                    v+++yAd s+A++ Lg++++ s+e+ ++  
  MMETSP1325-20131115|12480_1 39 RAEVKQTYADISLAREVLGFEPTTSIEQGLHHF 71
                 56799*********************9977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       391  (0.0285986); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 469.69
//
Query:       MMETSP1325-20131115|12482_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 248.19
//
Query:       MMETSP1325-20131115|12464_1  [L=458]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-21   77.3   0.1    1.8e-21   76.5   0.0    1.4  1  PF01370.16 NAD dependent epimerase/dehydratase family
    7.4e-17   61.0   3.1    2.9e-11   42.7   1.0    2.4  3  PF04321.12 RmlD substrate binding domain
      2e-14   53.0   1.7      1e-13   50.6   0.0    2.5  3  PF07993.7  Male sterility protein
    3.5e-12   45.4   3.9    1.6e-11   43.3   2.7    1.9  1  PF01073.14 3-beta hydroxysteroid dehydrogenase/isomerase family
    7.3e-09   35.7   0.7      2e-08   34.3   0.5    1.8  1  PF13460.1  NADH(P)-binding
    5.4e-07   28.6   5.3    8.4e-07   28.0   1.6    2.2  2  PF02719.10 Polysaccharide biosynthesis protein


Domain annotation for each model (and alignments):
>> PF01370.16  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.5   0.0   7.9e-25   1.8e-21       1     172 [.      84     264 ..      84     292 .. 0.82

  Alignments for each domain:
  == domain 1    score: 76.5 bits;  conditional E-value: 7.9e-25
                  EEEE--------HHHHHHHHH-TEEEEESSCSTCCCCCCHHHTBEEEB--TT-HHHHHHHHHHHT.SEEEE--S---HHHCCCSHHHHHHHHT---HHHHHHHHHHTT.EEEEEEEGGG---B..SSSC..................B-TTS--.--SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEE- CS
   PF01370.16   1 ilVtGatGfiGsalveallekgyevvnlirrtrseslatvrirvelveldltdkdalerlfaeeqpdaVihlAaesgvdassedpadfieanvegtlnlleaarkagvkrflfasSsevygkd..aeqp..................ikEetpl.gplspYaaaKlageklveayaeeyglnaiilrlfnvyG 172
                  ilVtG +G++G+al +al   g e   ++ +    +   v+     +e+d++d +a++ ++a+   d V+h Aa+ + +a+  ++ +f++ nv+gt+n+l++a ++g   ++++s++ +   +  ++ +                     ++p  gp+++Y+++Kl ge+ + a++++ gl+++i+r++  y 
  MMETSP1325-20131115|12464_1  84 ILVTGSAGYVGAALYRALVGLGAE--PVGLDVVPGAT--VD-----IEADVSDLEAVRTAMAGC--DGVMHTAAMHAPHATHRHETEFVKVNVAGTQNVLDVAAAQGNIPVVHTSTTSLTITKnvKRIEaegrivwldaasqppipsSAADDPDdGPRNKYGRTKLEGERRCVAATAA-GLPCVIVRISRAYP 264
                  8***********************..44444443322..22.....45****************..********96555666**********************************655555524333267777777777777776656677778*********************98.8********99885 PP

>> PF04321.12  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   1.0   1.3e-14   2.9e-11       2     101 ..      83     188 ..      82     191 .. 0.92
   2 !   17.3   0.0   6.5e-07    0.0015     119     153 ..     227     264 ..     217     278 .. 0.80
   3 ?   -3.3   0.0       1.3   2.9e+03      66      97 ..     406     437 ..     405     438 .. 0.86

  Alignments for each domain:
  == domain 1    score: 42.7 bits;  conditional E-value: 1.3e-14
                  EEEEE--------HHHHHH----EEEEE--TT.......T--TT-HHHHHHHHHHH--SEEEE------HHHHHH-HHHHHHHHT---HHHHHHHH.H---EEEEEEE CS
   PF04321.12   2 rilvtGanGqlGteLaralkeegvevvaldre.......eldltdpeavaalvkeakpdvvvnaAAytavdkaEseeeeayavnaegpenlAeaaa.avgallihiST 101
                  rilvtG+ G +G++L+ral   g+e v ld         e+d++d eav+++++   +d v+++AA +a ++  ++e e  +vn++g++n+ ++aa + +++++h ST
  MMETSP1325-20131115|12464_1  83 RILVTGSAGYVGAALYRALVGLGAEPVGLDVVpgatvdiEADVSDLEAVRTAMAG--CDGVMHTAAMHAPHATHRHETEFVKVNVAGTQNVLDVAAaQGNIPVVHTST 188
                  8**************************99888899999**************877..889******************************99877615679******9 PP

  == domain 2    score: 17.3 bits;  conditional E-value: 6.5e-07
                  ----S----TTT---HHHHH...H-SSEEEEEE-SEE- CS
   PF04321.12 119 taPlnvYGrtKlaGEqavla...anpkalivRtawvyg 153
                   +P+n YGrtKl+GE+   a   a+  ++ivR++  y 
  MMETSP1325-20131115|12464_1 227 DGPRNKYGRTKLEGERRCVAataAGLPCVIVRISRAYP 264
                  58*************8655523255589*****98885 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 1.3
                  HHHH-HHHHHHHHT---HHHHHHHHH---EEE CS
   PF04321.12  66 kaEseeeeayavnaegpenlAeaaaavgalli 97 
                  +aE+ ++     +  gp  l +a aa++all+
  MMETSP1325-20131115|12464_1 406 DAEDARAGXVLTKYLGPDVLVKAHAAMEALLV 437
                  58888888899999999999999999999987 PP

>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.38   8.7e+02      37      78 ..      31      72 ..      25      82 .. 0.80
   2 ?    0.5   0.1     0.094   2.2e+02       1      17 [.      86     102 ..      86     109 .. 0.89
   3 !   50.6   0.0   4.6e-17     1e-13      79     199 ..     129     263 ..     110     286 .. 0.81

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.38
    PF07993.7 37 aleRleeelekkelfsallkelaerikvvegDlseprlgLse 78
                  l+R  ++l +++l +++l+e a+ri++ + D +  ++   +
  MMETSP1325-20131115|12464_1 31 RLDRTPTDLHSMRLADPVLHEFASRIQAAAVDAAVADFQCAD 72
                 567888899999999999999999999999999888876555 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.094
    PF07993.7   1 lTGaTGfLGkvllekll 17 
                  +TG+ G++G++l + l+
  MMETSP1325-20131115|12464_1  86 VTGSAGYVGAALYRALV 102
                  8***********99886 PP

  == domain 3    score: 50.6 bits;  conditional E-value: 4.6e-17
    PF07993.7  79 edlqelaeevdviihsAAtvnfee...pykellrtNvlGtrevlelakklkklvllhvST.avvageregeveekvye..............eeederaklkglpntYtqsKalaEklvreasrrsglpvviiRpsiiv 199
                  e++++ ++ +d ++h AA     +   +  e++++Nv Gt++vl+ a++  + +++h ST + + +++ +++e    e               ++++ + ++g  n+Y ++K ++E+ + +a  + glp+vi+R s  +
  MMETSP1325-20131115|12464_1 129 EAVRTAMAGCDGVMHTAAMHAPHAthrHETEFVKVNVAGTQNVLDVAAAQGNIPVVHTSTtSLTITKNVKRIEA---EgrivwldaasqppiPSSAADDPDDGPRNKYGRTKLEGERRCVAATAA-GLPCVIVRISRAY 263
                  4567778899*******98754441114556*****************************75555555555544...135699*********99999********************99999966.********99765 PP

>> PF01073.14  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   2.7   7.1e-15   1.6e-11       1     121 [.      85     193 ..      85     204 .. 0.84

  Alignments for each domain:
  == domain 1    score: 43.3 bits;  conditional E-value: 7.1e-15
   PF01073.14   1 lVtGgsGFlGrrlvreLleleelkevrvldlrespelleelsklqvktvlegDvtdkekleealegvdvvihtaaiidvlg.kaerdeilkvnvkGTqnvleacvkagvrvlvYtSsaevvg 121
                  lVtG +G++G++l r+L+ l+            +p  l+ +    v+  +e+Dv d e ++ a++g d v+htaa+   +  + ++ e++kvnv GTqnvl+ ++ +g   +v+tS+++  +
  MMETSP1325-20131115|12464_1  85 LVTGSAGYVGAALYRALVGLGA-----------EPVGLDVVPGATVD--IEADVSDLEAVRTAMAGCDGVMHTAAMHAPHAtHRHETEFVKVNVAGTQNVLDVAAAQGNIPVVHTSTTSLTI 193
                  79******************93...........33344444445556..89************************9987775788889**************9999999999****998644 PP

>> PF13460.1  NADH(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.5   8.8e-12     2e-08       1     150 [.      84     266 ..      84     309 .. 0.75

  Alignments for each domain:
  == domain 1    score: 34.3 bits;  conditional E-value: 8.8e-12
    PF13460.1   1 IaviGAtGktGrrivkellarghevtalvRnpsklpessgvtivkkDlfdledlaealagvdvvvdafgarpe.....d........regvkhlldalkaagvrrlvvvsaaglyr.......dkpglfelldkplf................keylrakaaaeell...easgldwtivrPaalfeae 150
                  I+v+G  G +G ++ + l+  g e + l   p ++ +      ++ D++dle+++ a+ag+d v ++++ +++     +        + g++++ld+++a+g   +v  s+++l         +++g+  +ld+ +                 ++y r k ++e+ +   +a+gl+++ivr +  + ++
  MMETSP1325-20131115|12464_1  84 ILVTGSAGYVGAALYRALVGLGAEPVGLDVVPGATVD------IEADVSDLEAVRTAMAGCDGVMHTAAMHAPhathrHetefvkvnVAGTQNVLDVAAAQGNIPVVHTSTTSLTItknvkriEAEGRIVWLDAASQppipssaaddpddgprNKYGRTKLEGERRCvaaTAAGLPCVIVRISRAYPED 266
                  9****************************99998886......99***********************76666445441556767779**************99***9999996663333334344433332222225667888888899998889999999996665545779999999998888775 PP

>> PF02719.10  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.061   1.4e+02       1      21 [.      84     104 ..      84     114 .. 0.86
   2 !   28.0   1.6   3.7e-10   8.4e-07      60     128 ..     122     188 ..     113     198 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.061
   PF02719.10   1 vlvtGagGsiGselvrqilkk 21 
                  +lvtG++G +G +l r ++  
  MMETSP1325-20131115|12464_1  84 ILVTGSAGYVGAALYRALVGL 104
                  89************9988765 PP

  == domain 2    score: 28.0 bits;  conditional E-value: 3.7e-10
   PF02719.10  60 igdvrdkerleealeelkvdvvfhaAAlKhVPlveenpleavktNvlgtenvieaaieagvekvvliSt 128
                   +dv d e +++a+   ++d v+h+AA+    +  ++ +e vk Nv gt+nv+++a ++g   vv  St
  MMETSP1325-20131115|12464_1 122 EADVSDLEAVRTAMA--GCDGVMHTAAMHAPHATHRHETEFVKVNVAGTQNVLDVAAAQGNIPVVHTST 188
                  58*************..**********97766778899**********************999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.81u 0.40s 00:00:01.21 Elapsed: 00:00:00.64
# Mc/sec: 1714.89
//
Query:       MMETSP1325-20131115|12483_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-22   79.9   0.9    1.5e-22   79.5   0.7    1.2  1  PF13658.1  Ubiquitin C-terminal hydrolase 37 receptor binding site
  ------ inclusion threshold ------
      0.017   16.0   0.3      0.017   16.0   0.2    2.6  3  PF10550.4  Conantokin-G mollusc-toxin
      0.063   13.4   0.3       0.46   10.7   0.2    2.0  2  PF03448.12 MgtE intracellular N domain
      0.069   12.3   0.1      0.084   12.0   0.1    1.2  1  PF06186.6  Protein of unknown function (DUF992)
       0.16   11.3   4.8       0.54    9.6   3.3    1.7  1  PF05235.9  CHAD domain


Domain annotation for each model (and alignments):
>> PF13658.1  Ubiquitin C-terminal hydrolase 37 receptor binding site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   0.7   5.7e-26   1.5e-22       2      98 .]       3      98 ..       2      98 .. 0.93

  Alignments for each domain:
  == domain 1    score: 79.5 bits;  conditional E-value: 5.7e-26
    PF13658.1  2 dlsdvLspealep..llesadevqerLlsfLPeedlerapealrevlrsPqFkqalasltqalrdgglpsilsalglkvenggvpaagggaveafleal 98
                 +l++++++e+++   +l ++ evq++L+++LP e  ++++++l+ ++rsPqF+q+laslt+al+++  +si +++ l+ ++g++++a+g++veafl+a+
  MMETSP1325-20131115|12483_1  3 PLQNIVTSEEVMAtgVLGEE-EVQKMLIDLLPAE--AQNAAELEATVRSPQFRQTLASLTNALQTENYNSIFANFSLDTAAGAASLARGNNVEAFLQAI 98
                 78999998877766677777.999**********..************************************************************996 PP

>> PF10550.4  Conantokin-G mollusc-toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   16.0   0.2   6.2e-06     0.017       1      12 [.      20      31 ..      20      32 .. 0.91
   2 ?   -1.8   0.5       3.5   9.7e+03       4      12 ..      35      42 ..      35      43 .. 0.78
   3 ?   -3.6   0.0         5   1.4e+04      10      14 ..      83      87 ..      82      87 .. 0.76

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 6.2e-06
                 --CCCCCHHHHH CS
    PF10550.4  1 GEEElqkMaeeL 12
                 GEEE+qkM+ +L
  MMETSP1325-20131115|12483_1 20 GEEEVQKMLIDL 31
                 9*******9877 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 3.5
                 CCCCHHHHH CS
    PF10550.4  4 ElqkMaeeL 12
                 E q  a+eL
  MMETSP1325-20131115|12483_1 35 EAQN-AAEL 42
                 6788.9998 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 5
                 HHHTC CS
    PF10550.4 10 eeLiR 14
                 + L+R
  MMETSP1325-20131115|12483_1 83 ASLAR 87
                 77999 PP

>> PF03448.12  MgtE intracellular N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1      0.16   4.3e+02      75      91 ..      22      38 ..       9      45 .. 0.61
   2 ?   10.7   0.2   0.00017      0.46      41      96 ..      54     109 ..      21     111 .. 0.88

  Alignments for each domain:
  == domain 1    score: 1.1 bits;  conditional E-value: 0.16
                 CCHHHHHHHCS-CCCHH CS
   PF03448.12 75 eekveellsaldeeere 91
                 ee+++ l+++l++e ++
  MMETSP1325-20131115|12483_1 22 EEVQKMLIDLLPAEAQN 38
                 44444455555555443 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 0.00017
                  CCCHCCCCS-HHHHHHHHCTS-HHHHHHHHCCCHCCHHHHHHHCS-CCCHHHHHCC CS
   PF03448.12  41 lqeeliealpdeelaelleeldsDdavdlleelpeekveellsaldeeereeieel 96 
                  + ++l +al+ e+  +++++ + D a+   +    + ve++l+a++++ r+++e++
  MMETSP1325-20131115|12483_1  54 TLASLTNALQTENYNSIFANFSLDTAAGAASLARGNNVEAFLQAIEAQARAATENA 109
                  56789999******************************************998875 PP

>> PF06186.6  Protein of unknown function (DUF992)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   3.1e-05     0.084      93     139 ..      64     110 ..      22     116 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 3.1e-05
    PF06186.6  93 aGkYvGasaeasvgvGlganvlvggssksiaLqplsvqgqtGlnvaa 139
                    +Y  + a++s+ + +ga  l++g++ +  Lq ++ q+   +  aa
  MMETSP1325-20131115|12483_1  64 TENYNSIFANFSLDTAAGAASLARGNNVEAFLQAIEAQARAATENAA 110
                  368********************************999987665444 PP

>> PF05235.9  CHAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.3    0.0002      0.54      87     147 ..      22      94 ..       5     126 .. 0.60

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0002
    PF05235.9  87 ealkallerlearrrraherllaaldserytallqaleellaappllteae.............ee...akppaadv 147
                  e+++++l +l  + ++  ++l a+++s+++++ l++l+++l+ +      +             ++   +   ++++
  MMETSP1325-20131115|12483_1  22 EEVQKMLIDLLPAEAQNAAELEATVRSPQFRQTLASLTNALQTENY----NsifanfsldtaagAAslaRGNNVEAF 94 
                  4788899999999999***********************9944432....122224545433320033222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       885  (0.0647308); expected 273.4 (0.02)
Passed bias filter:                      510  (0.0373025); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.41s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 618.26
//
Query:       MMETSP1325-20131115|12485_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-06   29.1   0.0    1.2e-06   28.9   0.0    1.1  1  PF02338.14 OTU-like cysteine protease


Domain annotation for each model (and alignments):
>> PF02338.14  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   8.8e-11   1.2e-06      47     126 .]       5      84 ..       1      84 [. 0.67

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 8.8e-11
                  -----...............-HHHHHHHHHHHHHHTS-EEE.....---.--------------B--TTS-GGGS--S-EEE--BTTB- CS
   PF02338.14  47 fleeee...eeYlkeiskdgewgeeieifalahilrrpiiv.....lks.sggealvyikfggkylplekppsiclsspgvlgydgaHy 126
                  ++ ++      Yl + +++++wg++ e++a+++++ rp  +     +    + ++++ ++     + ++  ++ +ls++g     g+Hy
  MMETSP1325-20131115|12485_1   5 YVVGDMddyLAYLGQKRRNAVWGDDPEVQAMCELYDRPAEIwgfdpITGaRKLRTFHETP----SGSSHDRQPMRLSYYG-----GGHY 84 
                  5555553335688899999**********************7744422212222222222....3447778888888888.....***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|12488_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|12494_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 316.50
//
Query:       MMETSP1325-20131115|12491_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-46  158.3   0.0    2.7e-46  158.0   0.0    1.0  1  PF00632.20 HECT-domain (ubiquitin-transferase)
  ------ inclusion threshold ------
      0.042   12.8   0.0      0.055   12.4   0.0    1.1  1  PF09455.5  CRISPR-associated (Cas) DxTHG family


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.0   0.0   3.9e-50   2.7e-46     113     309 ..      20     214 ..      11     219 .. 0.86

  Alignments for each domain:
  == domain 1    score: 158.0 bits;  conditional E-value: 3.9e-50
                  .G.T-BSEE.EEE----EEEEES-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT----EEEEE--.......-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT CS
   PF00632.20 113 dl.altFtieedkkedeielvelipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggynansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelhpkftivrks......ededrLPtasTCfnyLkLpdYsskeilkekLltAieeg 309
                  +l +l+Ft + +++    ++v l+pnGa  pV+ e+ + Y++ ++  +l e  ++ l+a+r+G+  v+p e + +ft+eele+l+cG  + +dve l+++tey+ + ++++p+i ++w++++e+ peer ++LkFv + sr+P +    +  +f+ +          d+  LP a+TCf +L Lp+Y+ske+l+ kLl+Ai+++
  MMETSP1325-20131115|12491_1  20 ELaDLNFTTYLSDG----SQVPLVPNGAASPVELEEWRTYVEAVAACRLRE-SAPLLRALRNGLAAVLPVEIFPVFTAEELEKLMCGVRE-VDVELLKSCTEYE-EVEESEPHIGYFWSVVEEMRPEERTQLLKFVWARSRMPNSAK-DFPMNFKLHGPPtgsqddPDS-WLPHAQTCFFSLSLPKYTSKETLRSKLLFAINNS 214
                  3449****776663....3589************************99999.899***********************************.9************.699***********************************9443.444456555544555432344.4*******************************97 PP

>> PF09455.5  CRISPR-associated (Cas) DxTHG family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     8e-06     0.055     213     274 ..      62     129 ..      47     147 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8e-06
    PF09455.5 213 eklekiakalkalsnglplvrlvel..eeeieelkelleeaielnn.....ekekeeeakfakpfalll 274
                  ++l++ a++l+al+ngl+ v++ve+   +++eel++l++ ++e+          ++ee  +++p   ++
  MMETSP1325-20131115|12491_1  62 CRLRESAPLLRALRNGLAAVLPVEIfpVFTAEELEKLMCGVREVDVellksC-TEYEEVEESEPHIGYF 129
                  789999*********************9***********9999987888853.3344444443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.40s 00:00:00.94 Elapsed: 00:00:00.49
# Mc/sec: 1129.71
//
Query:       MMETSP1325-20131115|12495_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|12496_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.02   14.5   0.0      0.045   13.3   0.0    1.7  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.3e-06     0.045      43      64 .]       2      23 ..       1      23 [. 0.91

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.3e-06
                 HHHHHHHHHHHHTSHHHHHHHH CS
   PF00226.26 43 kfkeineAyevLsdpekraeyd 64
                 kf e+ +Aye+Lsdp+ +a+ d
  MMETSP1325-20131115|12496_1  2 KFVEVVAAYETLSDPKLKARHD 23
                 899*************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 596.74
//
Query:       MMETSP1325-20131115|12499_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-18   66.3   0.1    1.3e-18   66.0   0.1    1.0  1  PF01423.17 LSM domain


Domain annotation for each model (and alignments):
>> PF01423.17  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.1   9.8e-23   1.3e-18       2      65 ..       8      69 ..       7      71 .. 0.96

  Alignments for each domain:
  == domain 1    score: 66.0 bits;  conditional E-value: 9.8e-23
                 HHHHHTTS-EEEEETTTEEEE-EEEEEETTCEEEEEEEEEEE...EEE..EE.EEEEEGGGEEE CS
   PF01423.17  2 elqelinkrVtvelkngreveGtLkafDkfmNlvLrdvtetwkrkkknkrelgqiliRGenivl 65
                 +l+ +++k + ++l++ r+v G+L+++D+fmNlvL++++e ++ ++ n   +g+++iRG++i++
  MMETSP1325-20131115|12499_1  8 DLKRYMDKHLSIKLNGQRKVSGILRGYDNFMNLVLDETIEERSATERN--PIGMVVIRGNSIIQ 69
                 6999********************************************..************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 357.10
//
Query:       MMETSP1325-20131115|12500_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       915  (0.0669251); expected 273.4 (0.02)
Passed bias filter:                      549  (0.0401551); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 536.58
//
Query:       MMETSP1325-20131115|12505_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        56  (0.00409596); expected 273.4 (0.02)
Passed bias filter:                       56  (0.00409596); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 162.77
//
Query:       MMETSP1325-20131115|12504_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.25   10.5   7.1       0.28   10.3   4.9    1.1  1  PF05549.6  Allexivirus 40kDa protein
        2.2    7.4  28.4          3    6.9  19.7    1.2  1  PF00529.15 HlyD family secretion protein
        3.3    7.5  24.8        1.8    8.4  13.5    1.9  2  PF08432.5  Fungal protein of unknown function (DUF1742)


Domain annotation for each model (and alignments):
>> PF05549.6  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.9   6.2e-05      0.28      64     164 ..      26     126 ..       7     146 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 6.2e-05
    PF05549.6  64 iinklnpvsllsqttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsssetsesegPsssptka.ssaeaaase 164
                  + ++  + +l ++++ + + ++a+r+l+ ++ +l++ +++  +s+ +  +++l++  + +et+ +e  a+l +l++++++e e   +s+  + ++a+a+a+ 
  MMETSP1325-20131115|12504_1  26 LQKEALEKKLEAENAAVGQNKEAIRALEAKVVELQQGQESEIMSKGQ-AQKDLAQVTAQLETQRQEHSAQLAQLMAQHQQEREALATSMRRQtETAKAQAAA 126
                  5554445568899999******************9988777666555.56677888999**************99999988888777765540455555544 PP

>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  19.7   0.00065         3      79     195 ..      19     133 ..       8     155 .. 0.76

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.00065
                  .-HHHHHHHHHHHHHH..........HHHHHHHHHHHHTTEEE-S--.....-----BSS-B---------S-SEEEEEESSEEEEEEE-HHHHHHHHHHHH-----B----EE-EEEEE- CS
   PF00529.15  79 esekeadaarrearealaasqalaaskaeleaardnlasaeaalpasl....gsikasqatlgalltnlqaqglaakaqldeaklqlaqtaaelarsirapaqgervqeesklrsvqvgee 195
                  ++++++  +  +++++l a++   a++ + + a+++l+++ + l++ +     s++++q+ l +  ++l++q +   aql+++ +q++q +  la s r++ + +++q+    +sv+  + 
  MMETSP1325-20131115|12504_1  19 VEQQSERLQKEALEKKLEAEN---AAVGQNKEAIRALEAKVVELQQGQeseiMSKGQAQKDLAQVTAQLETQRQEHSAQLAQLMAQHQQEREALATSMRRQTETAKAQAA---ASVRKEQK 133
                  377788888888888888888...89999999999999999999999998888888888888676666999999999999999999999998888887777777677763...44444444 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  13.5    0.0004       1.8      40     170 ..       4     133 ..       2     139 .. 0.74
   2 ?   -1.3   9.3      0.38   1.7e+03      63     127 ..      91     150 ..      77     156 .. 0.27

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0004
    PF08432.5  40 psHLkDkqFatPivdaeaeeakkkkkelkeeiekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekekekeeeekaeelkkseeeaastldel.kprkyaLhkefyqsRidrkrkaevakkerer 170
                  + HLk  + a P ++ e+++++ +k++l++++e  ++ + ++++a++  ++k  e ++ +e++  +k   +++++  +  ++ e+++++++++  +l  + ++++ aL+ ++ ++    k++a+++ +++++
  MMETSP1325-20131115|12504_1   4 HRHLKSATCAWPPSQVEQQSERLQKEALEKKLEAENAAVGQNKEAIRALEAKVVELQQGQESEIMSK--GQAQKDLAQVTAQLETQRQEHSAQLAQLMAQhQQEREALATSMRRQTETAKAQAAASVRKEQK 133
                  78**********************************************9998877777555554444..445555555566666666666666665555447777789988888887777777775444433 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.38
    PF08432.5  63 kkkelkeeiekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekekekeeeekaeelkk 127
                  +  +l++ +++ ++e e+  +  ++++++ k + +     ++  ++++ +ek+k+++++a++++k
  MMETSP1325-20131115|12504_1  91 HSAQLAQLMAQHQQEREALATSMRRQTETAKAQAA-----ASVRKEQKRSEKYKKAATDAHNTSK 150
                  22223333333333333322222222222111111.....1111111222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      3181  (0.232665); expected 273.4 (0.02)
Passed bias filter:                      840  (0.0614394); expected 273.4 (0.02)
Passed Vit filter:                       127  (0.00928906); expected 13.7 (0.001)
Passed Fwd filter:                        38  (0.0027794); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.98u 0.36s 00:00:01.34 Elapsed: 00:00:00.51
# Mc/sec: 737.70
//
Query:       MMETSP1325-20131115|12511_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      368  (0.0269163); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|12512_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0059   16.3   0.5      0.022   14.5   0.3    1.8  1  PF12814.2 Meiotic cell cortex C-terminal pleckstrin homology


Domain annotation for each model (and alignments):
>> PF12814.2  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.3   1.6e-06     0.022       6     112 ..      64     155 ..      61     165 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.6e-06
    PF12814.2   6 iaqtmvGeylyKyvrrrkskgsekrhkRyvwvhpyertllWsskkpksekasekksksvkiesvlsvkdenplpkgl...ekanfnksililtpkralkltaetrerhev 112
                  +++++ G +l+K+ rr       k+++R v v+++ +++ W +             k++ +++++sv+++ + p  +   ++++ +  ++i+++ r+l ++ ++ ++++ 
  MMETSP1325-20131115|12512_1  64 VQMLVKGVWLWKHGRRG------KPKWRKVRVDKSLTAVFWGT------------GKQISVQDITSVQKGFSGPVLErtgRSEDAQLYVSIVSEGRSLDMQLTSTQERDA 155
                  578899*********99......899999************99............345888888888887766544422245559999************9999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 1036.79
//
Query:       MMETSP1325-20131115|12517_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.45
# Mc/sec: 308.86
//
Query:       MMETSP1325-20131115|12518_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00019   21.1   2.2    0.00054   19.6   1.5    1.6  1  PF05254.7  Uncharacterised protein family (UPF0203)
    0.00061   19.5   3.2      0.023   14.4   0.2    2.4  2  PF06747.8  CHCH domain
     0.0078   16.1   1.1       0.83    9.6   0.0    2.1  2  PF10203.4  Cytochrome c oxidase assembly protein PET191
     0.0085   15.9   0.9      0.014   15.1   0.1    1.7  2  PF02320.11 Ubiquinol-cytochrome C reductase hinge protein
  ------ inclusion threshold ------
      0.097   12.3   3.7        4.6    6.9   0.3    2.1  1  PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
        0.1   12.4   1.8       0.16   11.8   1.3    1.3  1  PF02297.12 Cytochrome oxidase c subunit VIb


Domain annotation for each model (and alignments):
>> PF05254.7  Uncharacterised protein family (UPF0203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   1.5   2.4e-07   0.00054       7      61 ..      20      79 ..      15      86 .. 0.82

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 2.4e-07
    PF05254.7  7 eeCtelkekYdkCFnkwysekFl.....kgdlaeneCeelfekYkkCvekalkkkgikel 61
                 ++C+++ +++ +CF+   ++        kg+    +C +  +kY +Cv++alk k ++ +
  MMETSP1325-20131115|12518_1 20 KQCEKVSAAFFDCFTAASKQEPGvssasKGEEGLAQCVKQMQKYDACVSRALKRKPMEMF 79
                 7899999999999999877664447777999999********************988755 PP

>> PF06747.8  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.1    0.0069        16      21      34 ..      21      34 ..      18      35 .. 0.79
   2 !   14.4   0.2     1e-05     0.023      17      35 .]      50      69 ..      46      69 .. 0.83

  Alignments for each domain:
  == domain 1    score: 5.4 bits;  conditional E-value: 0.0069
                 TTHHHHHHHHHHHC CS
    PF06747.8 21 kCrkefeafreCvk 34
                 +C k   af++C+ 
  MMETSP1325-20131115|12518_1 21 QCEKVSAAFFDCFT 34
                 78888888888875 PP

  == domain 2    score: 14.4 bits;  conditional E-value: 1e-05
                 SS.--TTHHHHHHHHHHHCC CS
    PF06747.8 17 de.fskCrkefeafreCvkk 35
                 +e   +C k+++++++Cv++
  MMETSP1325-20131115|12518_1 50 EEgLAQCVKQMQKYDACVSR 69
                 556789***********986 PP

>> PF10203.4  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00037      0.83      36      54 ..      14      32 ..      11      37 .. 0.86
   2 !    5.7   0.1    0.0061        14      20      51 ..      55      85 ..      47      87 .] 0.70

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00037
    PF10203.4 36 kkkelpeeCkalrkafleC 54
                 +   +p++C+++  af++C
  MMETSP1325-20131115|12518_1 14 HFPRVPKQCEKVSAAFFDC 32
                 56789************** PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0061
    PF10203.4 20 dCvkkekkspkeClkekkkelpeeCkalrkaf 51
                 +Cvk + +++  C+++  k  p e + +++++
  MMETSP1325-20131115|12518_1 55 QCVK-QMQKYDACVSRALKRKPMEMFRVQEEY 85
                 5775.667777777777776666666666655 PP

>> PF02320.11  Ubiquinol-cytochrome C reductase hinge protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.99   2.3e+03      16      27 ..      21      32 ..      17      42 .. 0.60
   2 !   15.1   0.1   6.3e-06     0.014      15      36 ..      54      75 ..      47      84 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.99
   PF02320.11 16 kcvkakeeyeeC 27
                 +c k    +  C
  MMETSP1325-20131115|12518_1 21 QCEKVSAAFFDC 32
                 555555555555 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 6.3e-06
   PF02320.11 15 ekcvkakeeyeeCveRVtskse 36
                 ++cvk++++y++Cv+R  +++ 
  MMETSP1325-20131115|12518_1 54 AQCVKQMQKYDACVSRALKRKP 75
                 79**************877765 PP

>> PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.3     0.002       4.6      10      26 ..      53      69 ..      46      79 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.002
    PF08583.5 10 rkeCaelikafaeChkd 26
                 +++C + +++++ C  +
  MMETSP1325-20131115|12518_1 53 LAQCVKQMQKYDACVSR 69
                 57888888888888775 PP

>> PF02297.12  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.3   6.9e-05      0.16      10      48 ..      20      70 ..      16      85 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.9e-05
   PF02297.12 10 kaCweardeYfkCldkkge.............daneCkaerkeyesnCpksw 48
                 k+C +   ++f+C ++ ++             + ++C ++ ++y + C++  
  MMETSP1325-20131115|12518_1 20 KQCEKVSAAFFDCFTAASKqepgvssaskgeeGLAQCVKQMQKYDA-CVSRA 70
                 89**************77767888877666665566*******965.88765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 393.36
//
Query:       MMETSP1325-20131115|12521_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       243  (0.0177736); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 603.88
//
Query:       MMETSP1325-20131115|12523_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.69
# Mc/sec: 409.81
//
Query:       MMETSP1325-20131115|12527_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-16   58.7   0.3      4e-16   58.5   0.2    1.0  1  PF00225.18 Kinesin motor domain
  ------ inclusion threshold ------
      0.019   14.4   0.1      0.019   14.4   0.0    1.1  1  PF09704.5  CRISPR-associated protein (Cas_Cas5)
      0.038   14.3   0.2      0.063   13.6   0.1    1.6  1  PF04692.8  Platelet-derived growth factor, N terminal region


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.2   8.7e-20     4e-16     165     257 ..      10      97 ..       3     100 .. 0.87

  Alignments for each domain:
  == domain 1    score: 58.5 bits;  conditional E-value: 8.7e-20
                  CEEECT---EEESSHHHHHHHHHHHHCHSHTTTSHHCHHHCTSEEEEEEEEEEEETTTTTT.EEEEEEEEEEEE----CCG----.---H-SH CS
   PF00225.18 165 kvyvkgltevevksaeevlellekgeknrkvastklneeSSRSHaiftitleqknkeketekeevklsklnLvDLAGsErasktgaaeerrlk 257
                  +++++g   ++v+ ++++ +ll+ ge++++ a+tk+n++SSR+Ha+f +tl  ++ + ++e     +s+l L DL GsE+++++  ++++ + 
  MMETSP1325-20131115|12527_1  10 RYVLSGAARRPVRGLDDLQRLLAIGEARKRRAATKMNQRSSRAHALFIMTLVCRDDACDKE----VHSQLYLADLGGSEQVKRSDVHHGE-MS 97 
                  4678899999*******************************************99665444....689***************9986665.55 PP

>> PF09704.5  CRISPR-associated protein (Cas_Cas5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   4.3e-06     0.019      66     147 ..      18      85 ..       4     101 .] 0.72

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 4.3e-06
                  -------------------------.-----EEEEEES--EEEEEEEEE-TT----SHHHHHHHHHHHH----SS-.---TTS CS
    PF09704.5  66 pgellrksdyhtvqalvkktrrdeladrkqragtilsdreYladahflvaleaeedagklleelkralekpawply.LGrkec 147
                  ++++    d++++         +++  rk+ra+t + +r  +a+a f+++l+  +d       + +   + +  l  LG  e 
  MMETSP1325-20131115|12527_1  18 RRPVRGLDDLQRLL-------AIGE-ARKRRAATKMNQRSSRAHALFIMTLVCRDD-------ACDKEVHSQLYLAdLGGSEQ 85 
                  44444445888888.......7777.89****************************.......55555555555556666665 PP

>> PF04692.8  Platelet-derived growth factor, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.4e-05     0.063      15      50 ..      18      52 ..      11      99 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.4e-05
    PF04692.8 15 nseirSisDLQRlLeidsvgaedeveedlkakashk 50
                 +  +r ++DLQRlL i     +  + +++++++s+ 
  MMETSP1325-20131115|12527_1 18 RRPVRGLDDLQRLLAIGEA-RKRRAATKMNQRSSRA 52
                 667999**********988.5555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       345  (0.0252341); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|12538_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 368.67
//
Query:       MMETSP1325-20131115|12540_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 566.04
//
Query:       MMETSP1325-20131115|12539_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-10   38.8   0.0    1.1e-09   38.3   0.0    1.2  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0     8e-14   1.1e-09       3     100 ..      48     146 ..      46     149 .. 0.91

  Alignments for each domain:
  == domain 1    score: 38.3 bits;  conditional E-value: 8e-14
                  BEEEEEEEE.........TSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSSCTTSSSSEEEEEETTTCEEEEEESSHHHHHHHHHHHH CS
   PF00169.24   3 keGyllkks.........ellktwkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkfalqkesnnyfeitfkdvesyllsaeseeerkrWvqalk 100
                  ++G+l+k+s           +++w+ r fvL ++ L+ fk+++  s++ +   +p++++t+++ +       ++  + f+i +  + ++ + ae+ee+r +W++a++
  MMETSP1325-20131115|12539_1  48 LCGTLSKRSnrcagicpnVCKPKWQSRLFVLVGTFLFRFKDEN--SSSIKGSPVPCESITCEISDGD-----SSFGYEFTIATLRK-TITVRAETEEDRAKWLAAIR 146
                  678899999999999988889*********************9..47777778************98.....69***********9.******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.47s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 1024.33
//
Query:       MMETSP1325-20131115|12544_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 518.40
//
Query:       MMETSP1325-20131115|12545_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00034   20.1  12.0    0.00051   19.5   8.3    1.1  1  PF04156.9  IncA protein
     0.0012   18.6  11.8     0.0016   18.2   8.2    1.1  1  PF13863.1  Domain of unknown function (DUF4200)
     0.0079   15.4  12.5     0.0094   15.1   8.7    1.3  1  PF00529.15 HlyD family secretion protein
  ------ inclusion threshold ------
      0.013   15.6   5.1      0.021   14.9   3.5    1.3  1  PF06078.6  Bacterial protein of unknown function (DUF937)
      0.019   15.0   0.6      0.034   14.1   0.4    1.6  1  PF12507.3  Human Cytomegalovirus UL139 protein
      0.019   15.3   8.1        0.4   11.1   5.6    2.3  1  PF00816.16 H-NS histone family
      0.021   13.8   3.2      0.026   13.5   2.2    1.1  1  PF04582.7  Reovirus sigma C capsid protein
      0.056   12.9  10.0      0.071   12.6   6.9    1.1  1  PF00769.14 Ezrin/radixin/moesin family
       0.06   10.9  11.8      0.081   10.5   8.2    1.1  1  PF01576.14 Myosin tail
      0.075   13.2   7.7       0.12   12.5   5.3    1.2  1  PF08232.7  Striatin family
       0.12   12.0   2.7       0.27   10.8   1.9    1.7  1  PF02183.13 Homeobox associated leucine zipper
       0.14   10.7   3.9       0.18   10.3   2.7    1.1  1  PF08317.6  Spc7 kinetochore protein
       0.14   11.6   0.4       0.36   10.3   0.3    1.6  1  PF12167.3  Domain of unknown function (DUF3596)
       0.16   12.2   5.8       0.26   11.5   4.0    1.2  1  PF06156.8  Protein of unknown function (DUF972)
       0.16   11.9   4.0       0.14   12.0   1.4    1.8  2  PF13751.1  Transposase DDE domain
       0.21   11.5   7.0       0.32   11.0   4.9    1.3  1  PF13339.1  Apoptosis antagonizing transcription factor
       0.33    9.1   3.9       0.37    9.0   2.7    1.0  1  PF10359.4  RNA pol II promoter Fmp27 protein domain
       0.43   10.1   6.8       0.62    9.6   4.7    1.3  1  PF08286.6  Spc24 subunit of Ndc80
       0.53    9.0   5.9       0.63    8.7   4.1    1.1  1  PF04111.7  Autophagy protein Apg6
       0.55    9.4  13.6        1.2    8.3   9.4    1.5  1  PF11180.3  Protein of unknown function (DUF2968)
       0.58    9.1   8.6       0.65    8.9   6.0    1.0  1  PF01690.12 Potato leaf roll virus readthrough protein
       0.64    9.8  11.6       0.94    9.2   8.0    1.2  1  PF03938.9  Outer membrane protein (OmpH-like)
       0.76    9.2  14.7        1.3    8.4  10.2    1.4  1  PF02321.13 Outer membrane efflux protein
       0.78    9.6  15.2       0.97    9.3   9.9    1.5  1  PF05103.8  DivIVA protein
        1.2    8.6   6.8        1.9    7.9   4.7    1.4  1  PF03962.10 Mnd1 family
          2    8.1  15.7        2.7    7.7  10.9    1.1  1  PF11559.3  Afadin- and alpha -actinin-Binding
        2.3    7.4  10.5        2.8    7.1   7.2    1.5  1  PF10422.4  Monopolin complex subunit LRS4
        2.3    7.8   9.3        3.6    7.2   6.5    1.3  1  PF10211.4  Axonemal dynein light chain
        5.4    6.3   9.6        7.9    5.7   6.7    1.2  1  PF06810.6  Phage minor structural protein GP20
        6.1    7.1   7.5       0.74   10.0   0.8    2.1  2  PF05178.7  KRI1-like family


Domain annotation for each model (and alignments):
>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   8.3   1.1e-06   0.00051     112     189 ..       8      85 ..       4      86 .. 0.96

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 1.1e-06
    PF04156.9 112 edleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrselerlqedlqrlqeklaelqrlle 189
                  ++le+d+++l  ++  le+++esl+++ ++l+++++ lr+e  d++++ q++ s+++ +++++q+++++la++++++e
  MMETSP1325-20131115|12545_1   8 SNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQALAQIKAAME 85 
                  679999********************************************************************9987 PP

>> PF13863.1  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   8.2   3.6e-06    0.0016      12      91 ..       6      85 ..       2      91 .. 0.95

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 3.6e-06
    PF13863.1 12 vqlaldakreeierkeeelkereeelekkqeelqeslikfnkflkdneakreraekkaeeekkekkekeeeikklkaqle 91
                 ++  l++ r+++ r++++l+ + e l+++++ l+es++   + + d++akr++   +a+  + ++++ e+ ++++ka +e
  MMETSP1325-20131115|12545_1  6 ARSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQALAQIKAAME 85
                 6778999*********************************************************************9887 PP

>> PF00529.15  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   8.7   2.1e-05    0.0094     103     190 ..       5      94 ..       2     167 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.1e-05
                  ..HHHHHHHHHHHHTTEEE-S--.-----BSS-B------....---S-SEEEEEESSEEEEEEE-HHHHHHHHHHHH-----B----EE-E CS
   PF00529.15 103 askaeleaardnlasaeaalpaslgsikasqatlgalltn....lqaqglaakaqldeaklqlaqtaaelarsirapaqgervqeesklrsv 190
                  ++++ le  r +l++++a+l+++  s+k+++a l++ +t     ++ + +++++ + +a++++a  + ++++ +++++ + +++ +s++  v
  MMETSP1325-20131115|12545_1   5 VARSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVlrseMADADAKRQQEASTAQVNRAARQ-QAEQALAQIKAA-METGDSSSMGV 94 
                  5667789999999999999999999999999999999998666655555555555555555555555.223333333333.33333333333 PP

>> PF06078.6  Bacterial protein of unknown function (DUF937)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   3.5   4.6e-05     0.021       6      89 ..      63     151 ..      58     167 .. 0.74

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 4.6e-05
    PF06078.6   6 galqgaalqqlaaalGllasadgaqaegalggalpallgglgagaalggntaap......gGlgallsalqqkghgdqlqswvggglnqp 89 
                  +++++aa qq ++al++ ++a +++ ++++g+al al++  + +aa+ g  ++          g++ sa+++ g +++++s v gg  ++
  MMETSP1325-20131115|12545_1  63 AQVNRAARQQAEQALAQIKAAMETGDSSSMGVALEALVAVATKAAAGTGT-SSRatfenpVAPGEVESAVKELGATGSARSSVPGGTPRS 151
                  58999************999999999999999999999655333333222.222345666999999999999999999999999665433 PP

>> PF12507.3  Human Cytomegalovirus UL139 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.4   7.5e-05     0.034      28      66 ..      24      62 ..       7      93 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 7.5e-05
    PF12507.3 28 lerrcllLerkiadlnsrilslrseidaldakyvaisrd 66
                 le  +  L+r+ a+ln  +++lrse+ ++dak++     
  MMETSP1325-20131115|12545_1 24 LESQVESLKRQKAALNESVTVLRSEMADADAKRQQEAST 62
                 55556678899999******************9976554 PP

>> PF00816.16  H-NS histone family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   5.6   0.00088       0.4       4      71 ..      55     126 ..       9     129 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00088
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXX.XXXXXX.XXXXX------EE-S--.-- CS
   PF00816.16   4 ealleklekeaeeaekkekkaalaeirelaae.....yGltleelaagrakkkakkkrakvpaKYrnpetnge 71 
                  ++++e+ +++ ++a+++++++ala+i++++++      G+ le l  + a+k+a+ + + ++a ++np  +ge
  MMETSP1325-20131115|12545_1  55 KRQQEASTAQVNRAARQQAEQALAQIKAAMETgdsssMGVALEAL-VAVATKAAAGTGTSSRATFENPVAPGE 126
                  56777778**********************994333345668888.9999999***************99887 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.2   5.8e-05     0.026      59     155 ..       8     109 ..       3     134 .. 0.67

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 5.8e-05
    PF04582.7  59 sdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladlselvsahdaalsslqtevdanstdisnlk.....sdvsanglnitdleervkslesg 155
                  s+l+ d +d+t+  + +++++++l+++ aal++sv  l se+ad     ++++++    +   +    +++ +k     +d s+ g+++  l     +  +g
  MMETSP1325-20131115|12545_1   8 SNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQALAQIKaametGDSSSMGVALEALVAVATKAAAG 109
                  89999999**********************************997666555544443333344444455555551111246677777777776554444433 PP

>> PF00769.14  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   6.9   0.00015     0.071      47     143 ..       5      97 ..       2     137 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00015
   PF00769.14  47 eeaqklekkakeleeekerLeeeaaksekekeeLekevdeaeaevakleeerekkeaeteqlqkelreareaeeeakeellevlaaptapsaavsep 143
                   ++ +lek++k l ++k++Le++ +  +++k  L++ v  +    ++++++ +k+++e+  +q + r+ar++ e+a ++ ++++ ++  +s  v+ +
  MMETSP1325-20131115|12545_1   5 VARSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLR---SEMADADAKRQQEASTAQVN-RAARQQAEQALAQIKAAMETGDSSSMGVALE 97 
                  577888999999999999999999999998888887765554...45666667777776666655.3444445667777788888887777555544 PP

>> PF01576.14  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   8.2   0.00018     0.081     631     704 ..       6      82 ..       2      98 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00018
   PF01576.14 631 arkaaEaeleeaservneltaqnssliaeKrkLEaelaalqsdldEa..anelkaaeerakkaq.adaarlaeeLrq 704
                  ar + E++++++  + + l++q++sl  +K  L++ +++l s++ +a  + +++a+  ++++a+ ++a++  +++++
  MMETSP1325-20131115|12545_1   6 ARSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADAdaKRQQEASTAQVNRAArQQAEQALAQIKA 82 
                  67778888888888888888888888888888888888888888765114455566666666541566666666665 PP

>> PF08232.7  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   5.3   0.00026      0.12      20      93 ..       7      80 ..       4      99 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 0.00026
    PF08232.7 20 rnaweiEraEmkarIakLeGerrglenlkedLkrrvkmLekalkqeraklkslkagveseskqeskssaeeeel 93
                 r++ e +r+ +  + a Le+++ +l++ k  L + v+ L  ++ +  ak ++  + ++++++ ++++++  ++ 
  MMETSP1325-20131115|12545_1  7 RSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQALAQI 80
                 788889999999999*************************9999999999986666666643333333333322 PP

>> PF02183.13  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.9   0.00059      0.27       3      42 ..      10      49 ..       9      58 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 0.00059
   PF02183.13  3 LErDYelLKrnydaLkaendsLqkEkekLraevlsLkekl 42
                 LE+D   L r+  +L ++ +sL+++k++L   v+ L++++
  MMETSP1325-20131115|12545_1 10 LEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEM 49
                 5666666777777888888888888888888888888776 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.7   0.00039      0.18     159     216 ..       8      65 ..       4      99 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00039
    PF08317.6 159 eelkedeellnkklelinsilpklrekkealkeelasLrqlkdeleecdseeleklre 216
                  ++l++d + l+++ + ++s +++l+ +k+al+e ++ Lr+   ++    ++e + ++ 
  MMETSP1325-20131115|12545_1   8 SNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQV 65 
                  4678888888888888888888888888888888888887777755555555555543 PP

>> PF12167.3  Domain of unknown function (DUF3596)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.3   0.00079      0.36      20      52 ..      55      87 ..      52      88 .. 0.92

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00079
    PF12167.3 20 kRcretlglpdtpanrkkaekllaeIeaeIalG 52
                 kR +e  + + ++a r++ae+ la+I+a++++G
  MMETSP1325-20131115|12545_1 55 KRQQEASTAQVNRAARQQAEQALAQIKAAMETG 87
                 788999999*********************998 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   4.0   0.00056      0.26      11      80 ..       8      79 ..       4      84 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00056
    PF06156.8 11 seleeqleelleeleelkkelkelleenaelkleneklrerleeleeeekkkekkkkkkk..lgegkdnLak 80
                 s+le++ ++l+++ ++l++++++l  + a+l+  ++ lr+++++ +++++++ +++++++   +++++ La+
  MMETSP1325-20131115|12545_1  8 SNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRaaRQQAEQALAQ 79
                 589999999999999999999999999999999999999999999986666665555554335666666666 PP

>> PF13751.1  Transposase DDE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1       1.9   8.5e+02      64      95 ..       6      35 ..       2      39 .. 0.64
   2 ?   12.0   1.4   0.00032      0.14      48     104 ..      39      93 ..      32     108 .. 0.76

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 1.9
    PF13751.1 64 arerlkseegkelykkRkikvEgvfaqikrnl 95
                 ar +l+++  k+l+++++ + E  + ++kr++
  MMETSP1325-20131115|12545_1  6 ARSNLEKD-RKDLTRQKA-TLESQVESLKRQK 35
                 45555533.666666666.8888888888776 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00032
    PF13751.1  48 grkvtieeeleearqkarerlkseegkelykkRkikvEgvfaqikrnlglrrlrlrG 104
                  +++vt+  + e a + a+++++    +  ++ R+ ++E++ aqik +++ +  +  G
  MMETSP1325-20131115|12545_1  39 NESVTVLRS-EMADADAKRQQEASTAQVNRAARQ-QAEQALAQIKAAMETGDSSSMG 93 
                  566766666.5666666666777777999999*9.************9988777666 PP

>> PF13339.1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   4.9    0.0007      0.32      38     118 ..      11      90 ..       4     100 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.0007
    PF13339.1  38 eealsefkegneelqealksaekalkklldtlleLreaLleedkksseeeesesakkrkr.aktektsldelweelekleer 118
                  e++++++++++++l+++++s++++  +l ++++ Lr+++++   +++ ++e+++a+ ++   +++++ l+++   +e  +++
  MMETSP1325-20131115|12545_1  11 EKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMAD--ADAKRQQEASTAQVNRAaRQQAEQALAQIKAAMETGDSS 90 
                  57788999********************************4..444444444444333334588889999999999887776 PP

>> PF10359.4  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.7   0.00081      0.37     187     254 ..      13      79 ..       2     120 .. 0.64

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00081
    PF10359.4 187 kelelnkddeelqkdleelekelselkerleflekeleelekeeeeseksssskkessekesesslse 254
                  ++ +l++++  l++++e+l+++ + l+e++ +l++e+ + +++++++ ++ + +  + ++  e++l++
  MMETSP1325-20131115|12545_1  13 DRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQA-EQALAQ 79 
                  2223345666777788888888888888888888888888777776666655544443333.333333 PP

>> PF08286.6  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   4.7    0.0014      0.62       3      54 ..       9      62 ..       7      85 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0014
    PF08286.6  3 eldnekvrlakelndleselenlqseleelkeeleeleeqene..gkeedeeea 54
                 +l++++ +l ++ + les++e+l+++++ l+e+++ l  ++ +   k ++e+++
  MMETSP1325-20131115|12545_1  9 NLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADadAKRQQEAST 62
                 68999999********************************99955223333222 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   4.1    0.0014      0.63      65     143 ..       7      85 ..       1      91 [. 0.85

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0014
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF04111.7  65 vealdseldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklkklelekelkslelqle 143
                   ++l+++ ++L +++  l++++e l++++  l+e ++ l  e    +++++q  +  +  +  + + e+ l  ++  +e
  MMETSP1325-20131115|12545_1   7 RSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQALAQIKAAME 85 
                  57889999**********************************9999999999888877777777777777777777665 PP

>> PF11180.3  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   9.4    0.0027       1.2     106     165 ..      20      82 ..       9      90 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0027
    PF11180.3 106 rraqleaqkaqlerliaasearaerLqadl...elareQeaqvaarqkqarkeaaaLeaqrea 165
                  ++a le+q ++l+r+ aa ++ ++ L++++   +++r+Qea  a+  ++ar++a++  aq +a
  MMETSP1325-20131115|12545_1  20 QKATLESQVESLKRQKAALNESVTVLRSEMadaDAKRQQEASTAQVNRAARQQAEQALAQIKA 82 
                  7899**********************9776222678999999999999999999775555444 PP

>> PF01690.12  Potato leaf roll virus readthrough protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   6.0    0.0014      0.65     278     433 ..      10     159 ..       1     170 [. 0.71

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0014
   PF01690.12 278 sktpsaeesesdaekgllslekedekeevskesesdaeeedeeltralaekeaaaeevkdaaeevlqskeepseklvesdkpeltpgaskeaevaatvlaaesvkedrdplekreksdkapskvlkarkekgvssllsssLeggklkkkaesseek 433
                   +++ ++ ++++a  +l+s++++ + ++ + +++  +  ++ + + a+ ++ea++++v++aa+++++++ ++ +  +e+ + +    a ++ +++at+ aa++ +++r ++e    +  ap +v+ a ke g + ++ ss+ gg+ +  a++ +++
  MMETSP1325-20131115|12545_1  10 LEKDRKDLTRQKA--TLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQALAQIKAAMETGDSSSMGVALEALVAVATKAAAGTGTSSRATFE----NPVAPGEVESAVKELGATGSARSSVPGGTPRSGASNASRA 159
                  4444455554444..3444444444444444444444444445555566888999999999999999988888888888888888888888899999999999999999999....567899*************************998654443 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   8.0    0.0021      0.94      43     124 ..      12     105 ..       3     114 .. 0.44

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.0021
    PF03938.9  43 eeak...ekqqelqakkkelqkeqknlqseraqlsaeaekakeeelq.........akeqelqayaqqlqaelqaeqqe.......vlqklidkiadaikk 124
                  +  k   +++++l+++ + l++++++l+++   l++e ++a ++++q         a       ++qq++++l++ +++        +  +++++ ++++k
  MMETSP1325-20131115|12545_1  12 KDRKdltRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQeastaqvnrA-------ARQQAEQALAQIKAAmetgdssSMGVALEALVAVATK 105
                  332223244444555555555555555555446666666666666664333322222.......3333333333333333334444555555553333333 PP

>> PF02321.13  Outer membrane efflux protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  10.2    0.0029       1.3      94     172 ..       5      82 ..       2      91 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.4 bits;  conditional E-value: 0.0029
   PF02321.13  94 aaeaeleqarrqlrlevaqaylqlllakeqlelakellklaekalelaearykaGlislldvlqaevrllqaraellqa 172
                   a+ +le+ r +l+ + a++  q++ +k+q ++++e+++ +++ ++ a a+ ++ ++++  v++a ++++++ +++++a
  MMETSP1325-20131115|12545_1   5 VARSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTA-QVNRAARQQAEQALAQIKA 82 
                  6899*******************************************************.8888777644443333333 PP

>> PF05103.8  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   9.9    0.0021      0.97      36     107 ..       9      82 ..       5      90 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0021
    PF05103.8  36 allkeneelkeeieeleekleeykeleeslkkslvva..qetaeevkanakkeaeliikeaekkaekiveeaee 107
                  +l k+ ++l+++ ++le+++e++k+++ +l++s+ v   + +  + k++++ ++ ++ ++a+++ae+ +++ ++
  MMETSP1325-20131115|12545_1   9 NLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLrsEMADADAKRQQEASTAQVNRAARQQAEQALAQIKA 82 
                  688999**************************986541033444666666667777777888888877654443 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.7    0.0042       1.9      63     127 ..      20      85 ..       3     108 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0042
   PF03962.10  63 akkklkteleklkkeleelkqrikelqaeiekekkkreeteeree.lleelkeleeelkklkkele 127
                  +k +l++++e lk++ + l++++  l+ e++++ +kr++++  ++ +    ++ e+ l ++k+ +e
  MMETSP1325-20131115|12545_1  20 QKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQvNRAARQQAEQALAQIKAAME 85 
                  456788888888888888888888888888888888887733333244455555555555555555 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  10.9     0.006       2.7      49     131 ..       2      84 ..       1      86 [. 0.95

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.006
    PF11559.3  49 rdleqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelqrlkniiqsiktqy 131
                  +d+ +r +le+  ++l+  ++ l+s++e lk+q ++l   ++ l ++ +++ +k +++ ++++  +   q  ++++++ik+++
  MMETSP1325-20131115|12545_1   2 EDRVARSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQALAQIKAAM 84 
                  688899*************************************************************************9976 PP

>> PF10422.4  Monopolin complex subunit LRS4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   7.2    0.0061       2.8      77     142 ..       6      73 ..       2     166 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0061
                  ----------------------------------XXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXX CS
    PF10422.4  77 qkseneklrklnKdqkalleSklsskesevdrfKikLeteesnskvrlqvr..esklatqdrklrskk 142
                   +s+ ek rk    qka+leS+++s + + + +   + +  s ++ +   r  e ++a+ +r  r ++
  MMETSP1325-20131115|12545_1   6 ARSNLEKDRKDLTRQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRqqEASTAQVNRAARQQA 73 
                  6899*********************9888776665554444444433333300444444455555553 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   6.5     0.008       3.6     120     181 ..      19      72 ..       6      86 .. 0.45

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.008
    PF10211.4 120 qgkselekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadeiaflkkqnqq 181
                   +k+ le+++++l+++k++L++ v+ l++++++++++ ++e ++ +          +++ qq
  MMETSP1325-20131115|12545_1  19 RQKATLESQVESLKRQKAALNESVTVLRSEMADADAKRQQEASTAQ--------VNRAARQQ 72 
                  2335555555555555555555555555555554444333333222........22222222 PP

>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.7     0.017       7.9      26      93 ..      11      75 ..       2      86 .. 0.64

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.017
    PF06810.6 26 eeeldslkeqlkerdkqiedLkkkvkdneeLkkkieklkeknkkkkeeyeaklkdlklnnaielalkk 93
                 e+ +++l  q ++ + q+e+Lk    ++  L++ ++ l +++++++++ +++ ++ ++n+a  ++ ++
  MMETSP1325-20131115|12545_1 11 EKDRKDLTRQKATLESQVESLKR---QKAALNESVTVLRSEMADADAKRQQEASTAQVNRAARQQAEQ 75
                 45577777777778888888877...456777777777777777777777777777777765443333 PP

>> PF05178.7  KRI1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.5       1.3   5.8e+02       3      22 ..      19      38 ..       6      53 .. 0.60
   2 ?   10.0   0.8    0.0016      0.74       5      40 ..      52      87 ..      48     107 .. 0.84

  Alignments for each domain:
  == domain 1    score: 0.7 bits;  conditional E-value: 1.3
    PF05178.7  3 rkeeekeekeeelkrlKnlk 22
                 r+++  e + e lkr K++ 
  MMETSP1325-20131115|12545_1 19 RQKATLESQVESLKRQKAAL 38
                 44444444555555555544 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 0.0016
    PF05178.7  5 eeekeekeeelkrlKnlkrkeieeklekikevaGlk 40
                 +++k+++e+  ++  ++ r+++e+ l++ik+++++ 
  MMETSP1325-20131115|12545_1 52 ADAKRQQEASTAQVNRAARQQAEQALAQIKAAMETG 87
                 67899**************************99872 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1764  (0.129023); expected 273.4 (0.02)
Passed bias filter:                      816  (0.059684); expected 273.4 (0.02)
Passed Vit filter:                       153  (0.0111908); expected 13.7 (0.001)
Passed Fwd filter:                        35  (0.00255998); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.72u 0.43s 00:00:01.14 Elapsed: 00:00:00.56
# Mc/sec: 770.26
//
Query:       MMETSP1325-20131115|12534_1  [L=586]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-30  104.2   0.6    1.2e-29  103.6   0.4    1.2  1  PF02668.11 Taurine catabolism dioxygenase TauD, TfdA family


Domain annotation for each model (and alignments):
>> PF02668.11  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.6   0.4   8.7e-34   1.2e-29      17     246 ..     228     556 ..     205     570 .. 0.85

  Alignments for each domain:
  == domain 1    score: 103.6 bits;  conditional E-value: 8.7e-34
                  ......EHHHHHHHHHHHH---EEEE---S..----TTT-----.---....--------SSBS--TT.-SSGGG----....--SB-S-TTSSS----EEEEEEE---........----EEEB---HHHHHHHHHHHHHHTT.EEEEEE----SS-...........................................--EEEEEESEEE----EEEE---TT.....TB...................................................-S---S-HHHHHHHHHHST..TT-EEE------EEEE-TTT-BB------ CS
   PF02668.11  17 dllsdededlaelrealaehgvvlfrglpl..speqfeelarrf.gpleqsprntfygetwdvrsvkanvkdaaytpedttralplHtDlsylesppgvqlLhclenpa........eGGetlfvdgfaaynaLspelkellae.gltyvysndgery.............e............................eespekrhPlvrthpvtgekvlyvnp.latkiq...gl.............................................vtlaeseellkaledhltdp..eftyrhkwqeGdlvifdNrrvlHgrtafd 246
                  +l+++ ++  a l+eal+ hg+ lfrg+    +p++fe++a+++ + l++ +  t    ++ v +    v++aa++p+    ++p H+++s+l++pp+ ++++++e            GGet++vd +a+++++ p +++++ae g+ y++ +++  +             e                                ++  P+ r hp+tg +++ ++  ++++     g                                              +t a+++e+ ++  +h+++    +t r+  q Gd+ i+dN+r++H+r a d
  MMETSP1325-20131115|12534_1 228 ELVAWVQARHAPLKEALRAHGAMLFRGFSFlsDPSDFESVAAAVdPDLQDVYLGTSP--RLPVENTS-AVFTAAEFPPV--LPVPEHCEMSFLPNPPRKVMFFAHEMDNldesgeplPGGETPLVDYAAVWRDMEPGARARFAErGIAYQRAQPSAARfgryfdprwtkpwEtmfgtddpelaeatarshgfdvrwdkvgTMTLTNAGPAARMHPETGVAAWNNHLsVLHESAwreGFamaarrheaagyrlaawrflgraalcamvdtiermvlglaglgqhATHADGSEIAADDLAHFRRLvwHHTRRFHHQRGDIDIIDNFRIAHSRAARD 556
                  4555555778899****************446************7688655543332..45555533.69********9..699*********************997799*9999999************************55*********9999888877766655505666677778888899999999999**9778899********************8777777666226688999999***********************************999*******888888877779*************************9763 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       266  (0.0194558); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.90u 0.33s 00:00:01.23 Elapsed: 00:00:00.63
# Mc/sec: 2228.99
//
Query:       MMETSP1325-20131115|12552_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 554.45
//
Query:       MMETSP1325-20131115|12550_1  [L=274]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.033   12.1   1.0      0.035   12.0   0.7    1.1  1  PF02724.9 CDC45-like protein
       0.46    9.5   3.0       0.63    9.1   2.1    1.1  1  PF06524.7 NOA36 protein


Domain annotation for each model (and alignments):
>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.7   5.2e-06     0.035     120     198 ..      85     177 ..      65     233 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.2e-06
    PF02724.9 120 ayealvemkeeeeeesdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsnessl.................akslrrrrrrer 198
                   +++l       e   d d+d+e+++e+ +++++ +r s++d + ++d ++ ++  +  +  +   +                 a+++ r  r+ r
  MMETSP1325-20131115|12550_1  85 LFHELLLIGTAAEAAYDVDDDEEEEDEDWDEASRADRRSSHDGNADKDGRRGRSARDGGRDGS---RgtiggllgsftspfnsrARRASRASRASR 177
                  444444444344444444555554444444444444444444333333333322222222222...134678899998888544333333333333 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.1   9.2e-05      0.63     227     300 ..      52     129 ..      42     143 .. 0.58

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 9.2e-05
    PF06524.7 227 lstrsykfgrqtrgeesddeegygaykknlssdkygda....ksvnygyesdddeeesaedydeeededddddeeede 300
                  lstrs   g    + +sd+  +   y   ++ +   +     ++++ +y+ dddeee++ed de +  d   +++ + 
  MMETSP1325-20131115|12550_1  52 LSTRSAAAGPLWAAVHSDGLMKELDYDAHANEKLFHELlligTAAEAAYDVDDDEEEEDEDWDEASRADRRSSHDGNA 129
                  5666666666666666665444433333322222222211113566789999*********99977666655555433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1340.00
//
Query:       MMETSP1325-20131115|12557_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|12553_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-17   63.5   0.0    2.4e-17   62.5   0.0    1.5  1  PF04564.10 U-box domain
      1e-05   24.9   0.3    2.3e-05   23.7   0.0    1.7  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
  ------ inclusion threshold ------
      0.085   12.2   0.0       0.19   11.1   0.0    1.5  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
       0.34   10.7   2.8        2.7    7.8   0.6    2.9  2  PF09722.5  Protein of unknown function (DUF2384)


Domain annotation for each model (and alignments):
>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5   0.0   6.9e-21   2.4e-17       1      72 [.     315     385 ..     315     386 .. 0.97

  Alignments for each domain:
  == domain 1    score: 62.5 bits;  conditional E-value: 6.9e-21
                  --GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHHCC CS
   PF04564.10   1 vPdefldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKekIdkfleekk 72 
                  vP  +l+pi++elm dPv+++ g+ ++r  i+k+    +++dP+t + l +++l+pn  l++ I+++ ++++
  MMETSP1325-20131115|12553_1 315 VPSQYLCPISMELMVDPVLTSTGQCYERDNIQKWFAI-NAVDPLTGTRLHSKMLVPNHPLRQLIEAWKANRR 385
                  899*********************************9.*****************************98775 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       2.1   7.2e+03      30      39 ..     235     244 ..     232     248 .. 0.71
   2 !   23.7   0.0   6.6e-09   2.3e-05       6      45 ..     314     350 ..     307     365 .. 0.85

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 2.1
                  S---EEEHHH CS
    PF13445.1  30 pCGhvisrea 39 
                   C h +sr a
  MMETSP1325-20131115|12553_1 235 GCHHMLSRLA 244
                  5888888855 PP

  == domain 2    score: 23.7 bits;  conditional E-value: 6.6e-09
                  XXXXX-B-TTT-S.-SS....EEEES---EEEHHHHHHHHH CS
    PF13445.1   6 hfhsifaCpiske.qsteqnpPvvLpCGhvisrealeklak 45 
                     s+  Cpis+e + +    Pv+   G +++r+ ++k++ 
  MMETSP1325-20131115|12553_1 314 EVPSQYLCPISMElMVD----PVLTSTGQCYERDNIQKWFA 350
                  6789999********88....**999*************87 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   5.5e-05      0.19      13      43 ..     320     349 ..     311     369 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 5.5e-05
                  B-TTT-SB-SSEEEES..----EEEHHHHHHHH CS
    PF11789.3  13 kCpltlkpfkePvtsk..kCnHvFEkeaIlkml 43 
                   Cp++++ + +Pv     +    +E+++I+k +
  MMETSP1325-20131115|12553_1 320 LCPISMELMVDPVLTStgQ---CYERDNIQKWF 349
                  6************866244...5******9987 PP

>> PF09722.5  Protein of unknown function (DUF2384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.6   0.00079       2.7       3      33 ..     269     299 ..     267     306 .. 0.85
   2 ?    1.0   0.0       0.1   3.5e+02      21      33 ..     416     428 ..     414     428 .. 0.88

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00079
    PF09722.5   3 qaeavfgdeekarqWLrtPnpaLgGrtPldl 33 
                  +a a ++  ++ ++WLr+   aL+  tPl l
  MMETSP1325-20131115|12553_1 269 AAAAALQQRQQGQEWLRRRELALDTNTPLTL 299
                  5556667778999***************976 PP

  == domain 2    score: 1.0 bits;  conditional E-value: 0.1
    PF09722.5  21 PnpaLgGrtPldl 33 
                   +++L G tP+dl
  MMETSP1325-20131115|12553_1 416 ALRMLQGLTPADL 428
                  6799*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.38s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1816.19
//
Query:       MMETSP1325-20131115|12561_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.5   0.0       0.16   11.7   0.0    2.1  2  PF08681.6 Protein of unknown function (DUF1778)
      0.023   14.7   0.0      0.059   13.4   0.0    1.8  1  PF13499.1 EF-hand domain pair
      0.047   13.1   0.0       0.16   11.4   0.0    1.9  1  PF13833.1 EF-hand domain pair
      0.085   12.6   0.0        0.7    9.8   0.0    2.3  2  PF13405.1 EF-hand domain


Domain annotation for each model (and alignments):
>> PF08681.6  Protein of unknown function (DUF1778)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.6e-05      0.16      40      75 ..      54      89 ..      48      98 .. 0.85
   2 ?    0.3   0.0      0.17   5.7e+02      47      61 ..     117     131 ..     112     134 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.6e-05
    PF08681.6 40 vieeherieLseedfqaflaaLdeppkpnerLkkal 75
                 +++++    + e+ f a+++ L +p++p++rL+++ 
  MMETSP1325-20131115|12561_1 54 IMDDEGSGLVAEQPFLALMESLRHPVEPKQRLRAIY 89
                 67777777889999******************9875 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.17
    PF08681.6  47 ieLseedfqaflaaL 61 
                   ++ eed++++++ L
  MMETSP1325-20131115|12561_1 117 TYMREEDWARLIERL 131
                  57899******9988 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.7e-05     0.059      13      60 ..      23      66 ..      12      72 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 1.7e-05
    PF13499.1 13 gdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfe 60
                 ++g++   + +++++++g    ++ ++ ++++++  +D  g+G++  +
  MMETSP1325-20131115|12561_1 23 KNGKVKEKDVMKMFRAAG----MGPTPYEVEKYMSIMDDEGSGLVAEQ 66
                 69****************....77777777777**********98665 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.7e-05      0.16       3      53 ..      25      74 ..      23      75 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.7e-05
    PF13833.1  3 GlItreeLkralallglkglseeevdilfrefDtdgdGkisfeEFcvller 53
                 G++  ++ +++ ++ g++ ++++ev+  ++ +D +g+G + +  F++l+e+
  MMETSP1325-20131115|12561_1 25 GKVKEKDVMKMFRAAGMG-PTPYEVEKYMSIMDDEGSGLVAEQPFLALMES 74
                 666666666655555999.*********************99999999987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0002       0.7       1      29 [.      12      38 ..      12      42 .. 0.88
   2 ?   -0.1   0.0      0.32   1.1e+03       7      17 ..      53      63 ..      47      75 .. 0.73

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0002
                 HHH---GCC-------B---HHHHHHH.H CS
    PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLrks 29
                 el++ F++f   ++Gk+  +++++++r +
  MMETSP1325-20131115|12561_1 12 ELKATFRHF-AGKNGKVKEKDVMKMFR-A 38
                 6899*****.678************99.4 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.32
                 GCC-------B CS
    PF13405.1  7 klfDkdgdGki 17
                  ++D+ g+G +
  MMETSP1325-20131115|12561_1 53 SIMDDEGSGLV 63
                 578999*9977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.41s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 723.70
//
Query:       MMETSP1325-20131115|12565_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-42  145.0   0.0    1.8e-42  144.6   0.0    1.2  1  PF10237.4 Probable N6-adenine methyltransferase


Domain annotation for each model (and alignments):
>> PF10237.4  Probable N6-adenine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.6   0.0   1.3e-46   1.8e-42       2     161 ..      89     243 ..      88     244 .. 0.97

  Alignments for each domain:
  == domain 1    score: 144.6 bits;  conditional E-value: 1.3e-46
    PF10237.4   2 lsQFwyseeTaellakellesaeeetkiavvsaPsvyaalkeeeepkknvvlleyDkrFavfgee.kfvfYDynkplelpeelkskfdlviaDPPFLseeclektaktiklllkekaklllctgeemeelvkkklelkitkfepehernLsnefrcyanfe 161
                  ++Q+wys  T+e+++ e++e+  e  k+a+vs+Ps++ +l +  e++++  +l+yD+++++   +  fvfYDyn+p+++pee+k++f+++++DPP++++e+++++a+t+klll+++ ++ll+t++e++e++k++l+++ ++f+p+  + L +++ +y+++ 
  MMETSP1325-20131115|12565_1  89 INQYWYSPITIEKMVAEVKEHGGEPLKVAFVSTPSLFFSLTT--EQRRECAVLDYDRKWES---DpGFVFYDYNEPESVPEEIKGTFEMLVIDPPYITREVWAQYAITAKLLLAPNGRILLSTVAENAEMMKELLDVEPQNFRPSIPK-LVYQYCLYTSYP 243
                  69***************************************9..7889999**********...447********************************************************************************9.**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       333  (0.0243563); expected 273.4 (0.02)
Passed bias filter:                      298  (0.0217964); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1369.35
//
Query:       MMETSP1325-20131115|12570_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 505.90
//
Query:       MMETSP1325-20131115|12571_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 939.37
//
Query:       MMETSP1325-20131115|12566_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-54  183.2   0.4    1.6e-54  182.9   0.3    1.1  1  PF01775.12 Ribosomal L18ae/LX protein domain


Domain annotation for each model (and alignments):
>> PF01775.12  Ribosomal L18ae/LX protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.9   0.3   1.2e-58   1.6e-54       2     123 ..       7     128 ..       6     129 .. 0.98

  Alignments for each domain:
  == domain 1    score: 182.9 bits;  conditional E-value: 1.2e-58
   PF01775.12   2 keyqVvGrhlptekepepkvyrmkifalnkvvakSrfwrflkklkklkkrkgeivqieeitekkptkvknfgiwlrYqsrsgthnmykeyralteekAveklYselasrhrvrrssiqIlkv 123
                  + yqVvGr+ pte+ep p+ yrmk+fa+n+vvakSrfw+f+++ + +kk++gei++++ei ek+p +vkn++ wlrY+srsgthnmy+eyralt ++Av+++Yse+a+rhr+r +siqI++ 
  MMETSP1325-20131115|12566_1   7 SLYQVVGRKAPTEAEPMPPAYRMKLFAPNAVVAKSRFWYFMHQYRNMKKTTGEILDVNEIREKDPYTVKNYALWLRYDSRSGTHNMYREYRALTLNSAVDQMYSEMAGRHRARPRSIQIIRT 128
                  56*********************************************************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.39s 00:00:00.85 Elapsed: 00:00:00.56
# Mc/sec: 752.54
//
Query:       MMETSP1325-20131115|12574_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.092   12.3   0.1       0.13   11.8   0.1    1.4  1  PF10675.4 Protein of unknown function (DUF2489)


Domain annotation for each model (and alignments):
>> PF10675.4  Protein of unknown function (DUF2489)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   9.2e-06      0.13      44      75 ..       2      33 ..       1      64 [. 0.82

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 9.2e-06
    PF10675.4 44 iakAmleeqcelsEgaiRikvLldalqleese 75
                 +a+A+l+++  l E+ iR+k ++++++l++ +
  MMETSP1325-20131115|12574_1  2 VANATLKQESRLLEALIRLKGICNTFDLDLMA 33
                 799***********************999654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       593  (0.0433733); expected 273.4 (0.02)
Passed bias filter:                      548  (0.0400819); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.54
# Mc/sec: 350.58
//
Query:       MMETSP1325-20131115|12577_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      235  (0.0171884); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 655.33
//
Query:       MMETSP1325-20131115|12580_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-09   36.6   5.0    4.2e-09   36.5   3.5    1.1  1  PF04145.10 Ctr copper transporter family


Domain annotation for each model (and alignments):
>> PF04145.10  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   3.5   3.1e-13   4.2e-09     100     143 ..       2      45 ..       1      46 [. 0.95

  Alignments for each domain:
  == domain 1    score: 36.5 bits;  conditional E-value: 3.1e-13
   PF04145.10 100 qhlirallhvlqvglsYllMLvvMtynvglflavvlGaalGyfl 143
                  ++li ++l+v+q++ +YllML++Mty v  +  v+lG+++G+ +
  MMETSP1325-20131115|12580_1   2 MKLIHTTLYVAQLTDGYLLMLAAMTYQVEFLAFVILGLGAGHHF 45 
                  589**************************************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       256  (0.0187244); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|12589_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-05   22.8   0.0    7.4e-05   22.4   0.0    1.2  1  PF06201.8 PITH domain


Domain annotation for each model (and alignments):
>> PF06201.8  PITH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   5.4e-09   7.4e-05     116     151 ..       7      42 ..       2      43 .. 0.92

  Alignments for each domain:
  == domain 1    score: 22.4 bits;  conditional E-value: 5.4e-09
                  --TTT-S-EEEEEEEEEE--------EESEEEEE-- CS
    PF06201.8 116 lkvvkFqnvnsLtifvedndgeeeetridkiglrGe 151
                  ++ + F+nv+++t+f++ n g+ eet +++ig+ G+
  MMETSP1325-20131115|12589_1   7 TRQAPFTNVTHVTFFFTANLGGAEETVVQYIGMQGD 42 
                  67889****************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|12595_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 391.24
//
Query:       MMETSP1325-20131115|12605_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   25.2   0.0    1.4e-05   25.0   0.0    1.0  1  PF00615.14 Regulator of G protein signaling domain
  ------ inclusion threshold ------
      0.037   13.9   0.0      0.039   13.8   0.0    1.3  1  PF13103.1  TonB C terminal


Domain annotation for each model (and alignments):
>> PF00615.14  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0     2e-09   1.4e-05      50     114 ..       2      67 ..       1      71 [. 0.93

  Alignments for each domain:
  == domain 1    score: 25.0 bits;  conditional E-value: 2e-09
                  HHHHHHHHTSSSSTTSSTS-HHHHHHHHHHTCS...--TTTTHHHHHHHHHHHTTHHHHHHHCSHH CS
   PF00615.14  50 akeIynkylapsspkelnidkklreeleknleka.qpsrklfeeaqeevfrllekdsypkFlksel 114
                  a +Iy+++++++s +e+ i+++ r+++++ + k  +   k+f+ea ++  + ++++  p F +s+ 
  MMETSP1325-20131115|12605_1   2 ASQIYDEFVSEESGSEVCISNEERARVADMIGKIgHYGNKVFDEAVKSAVQSIKRQILPGFNSSKS 67 
                  789*****************************9998899**********************99975 PP

>> PF13103.1  TonB C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   5.6e-06     0.039      49      72 ..      38      63 ..       3      74 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 5.6e-06
    PF13103.1 49 SgneafDeavkrale..kasplPppp 72
                  gn+ fDeavk a++  k++ lP + 
  MMETSP1325-20131115|12605_1 38 YGNKVFDEAVKSAVQsiKRQILPGFN 63
                 59*************88888888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       459  (0.0335723); expected 273.4 (0.02)
Passed bias filter:                      428  (0.0313049); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|12611_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.055   12.9   0.8        2.9    7.4   0.0    2.2  2  PF13719.1  zinc-ribbon domain
      0.093   12.0   0.0        0.1   11.9   0.0    1.1  1  PF03473.12 MOSC domain
      0.097   11.8   0.0      0.098   11.8   0.0    1.0  1  PF00481.16 Protein phosphatase 2C
      0.098   12.1   1.2        1.5    8.3   0.0    2.2  2  PF11331.3  Protein of unknown function (DUF3133)


Domain annotation for each model (and alignments):
>> PF13719.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0   0.00086       2.9      16      29 ..      29      42 ..      24      43 .. 0.86
   2 ?    3.9   0.2      0.01        35      23      32 ..      58      67 ..      54      68 .] 0.76

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00086
    PF13719.1 16 dekippkgrkvrCs 29
                 d++++ + +kvrC+
  MMETSP1325-20131115|12611_1 29 DAQLKVEHHKVRCG 42
                 889**********7 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.01
    PF13719.1 23 grkvrCskCg 32
                 + +v+C+ Cg
  MMETSP1325-20131115|12611_1 58 RWSVKCGWCG 67
                 448******8 PP

>> PF03473.12  MOSC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     3e-05       0.1      61      96 ..      17      53 ..       8      65 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3e-05
                 CCGB-.EEEE----EEEEEE-----THHHHHHCHCCH CS
   PF03473.12 61 dtwli.rririGgvelevsgpcerCvvttvdqetgar 96
                 ++++i +++r  +++l+v+    rC +t  + + +  
  MMETSP1325-20131115|12611_1 17 KDAAIvDAFRSVDAQLKVEHHKVRCGTTATSLYVSYD 53
                 344455**********************999876654 PP

>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.9e-05     0.098      73     120 ..      18      67 ..       7      68 .] 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 2.9e-05
                  GGHCHHHHHH.HHCHHHHHHCCS.HTT---EEEEEEESSSE......EEEEEE- CS
   PF00481.16  73 ekalrksfladtdeelksseantepsksGstavvalirgqk......lyvAnvG 120
                  ++a+ ++f++  d +lk   ++ ++ ++G+ta++ +++ ++      +++ ++G
  MMETSP1325-20131115|12611_1  18 DAAIVDAFRS-VDAQLKV--EH-HKVRCGTTATSLYVSYDRakdrwsVKCGWCG 67 
                  6899999**9.8888887..33.589************9998888888888887 PP

>> PF11331.3  Protein of unknown function (DUF3133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00043       1.5      26      45 ..      33      52 ..      27      53 .. 0.78
   2 ?    3.1   0.2     0.018        62      27      38 ..      56      67 ..      50      68 .] 0.75

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00043
    PF11331.3 26 kkkqqklrCGsCsevlslsl 45
                 k +++k+rCG+  + l +s+
  MMETSP1325-20131115|12611_1 33 KVEHHKVRCGTTATSLYVSY 52
                 5579******9988888876 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.018
    PF11331.3 27 kkqqklrCGsCs 38
                 k +  ++CG C+
  MMETSP1325-20131115|12611_1 56 KDRWSVKCGWCG 67
                 4566799****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 313.37
//
Query:       MMETSP1325-20131115|12610_1  [L=168]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|12613_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-10   41.6   0.0    1.9e-06   27.9   0.0    1.9  2  PF12796.2  Ankyrin repeats (3 copies)
    2.7e-07   29.9   0.0    0.00013   21.5   0.0    3.2  3  PF00023.25 Ankyrin repeat
    9.1e-07   28.4   0.0    0.00064   19.6   0.0    3.3  3  PF13606.1  Ankyrin repeat
    3.6e-05   24.0   0.0    0.00051   20.3   0.0    2.3  2  PF13637.1  Ankyrin repeats (many copies)
     0.0018   18.3   0.0       0.03   14.4   0.0    2.5  3  PF13857.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   8.7e-07    0.0024      32      87 ..      50     105 ..      43     106 .. 0.95
   2 !   27.9   0.0   7.1e-10   1.9e-06       7      52 ..      87     137 ..      84     138 .] 0.78

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 8.7e-07
    PF12796.2  32 lAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnl 87 
                  +A+e g++++v  L+ +g+ + + ++eg tp   A+  ++  ++  L+e g+dvn+
  MMETSP1325-20131115|12613_1  50 VAIEEGDFDTVANLVRNGNYPIDHEAEGVTPFVKAMTEENSAALVNLVELGSDVNY 105
                  79*******************9999****************************995 PP

  == domain 2    score: 27.9 bits;  conditional E-value: 7.1e-10
    PF12796.2   7 ngnlelvklLlekgadvdl.....getpLhlAaeagnleivklLleagadv 52 
                   +n  ++  L+e g dv++     ge+pL++ ++ gn++++k+Ll++ga+v
  MMETSP1325-20131115|12613_1  87 EENSAALVNLVELGSDVNYplsttGERPLMYGVRLGNVDMLKILLNYGANV 137
                  566667777888899999888777777999999999999999999999886 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.077   2.1e+02       8      25 ..      50      67 ..      49      72 .. 0.87
   2 ?    2.7   0.0     0.042   1.2e+02       2      30 ..      77     105 ..      76     106 .. 0.82
   3 !   21.5   0.0   4.6e-08   0.00013       2      28 ..     111     137 ..     110     138 .] 0.93

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.077
                 HHHHTTHHHHHHHHHHTT CS
   PF00023.25  8 lAalrgnlevvklLlsqG 25
                 +A++ g+ + v  L+ +G
  MMETSP1325-20131115|12613_1 50 VAIEEGDFDTVANLVRNG 67
                 589999*********998 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.042
                  SCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdlna 30 
                  G TP   A    n   +  L++ G d+n 
  MMETSP1325-20131115|12613_1  77 GVTPFVKAMTEENSAALVNLVELGSDVNY 105
                  6777777888888888899********95 PP

  == domain 3    score: 21.5 bits;  conditional E-value: 4.6e-08
                  SCBHHHHHHHTTHHHHHHHHHHTTSST CS
   PF00023.25   2 GfTPLHlAalrgnlevvklLlsqGAdl 28 
                  G+ PL++ ++ gn++++k Ll++GA++
  MMETSP1325-20131115|12613_1 111 GERPLMYGVRLGNVDMLKILLNYGANV 137
                  666***********************8 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.092   2.5e+02       7      25 ..      49      67 ..      40      73 .. 0.83
   2 ?    3.0   0.0     0.054   1.5e+02       2      29 ..      77     104 ..      76     105 .. 0.73
   3 !   19.6   0.0   2.3e-07   0.00064       2      28 ..     111     137 ..     110     138 .] 0.95

  Alignments for each domain:
  == domain 1    score: 2.2 bits;  conditional E-value: 0.092
    PF13606.1  7 hlAasngrielveaLleng 25
                 ++A++ g  + v  L++ng
  MMETSP1325-20131115|12613_1 49 DVAIEEGDFDTVANLVRNG 67
                 6899999999999999998 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.054
    PF13606.1   2 GnTpLhlAasngrielveaLlengadin 29 
                  G Tp+  A+   + +++  L+e g d+n
  MMETSP1325-20131115|12613_1  77 GVTPFVKAMTEENSAALVNLVELGSDVN 104
                  56777777666666667778******99 PP

  == domain 3    score: 19.6 bits;  conditional E-value: 2.3e-07
    PF13606.1   2 GnTpLhlAasngrielveaLlengadi 28 
                  G+ pL++ ++ g+++++++Ll++ga++
  MMETSP1325-20131115|12613_1 111 GERPLMYGVRLGNVDMLKILLNYGANV 137
                  789**********************98 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.12   3.3e+02       5      24 ..      48      67 ..      44      84 .. 0.68
   2 !   20.3   0.0   1.9e-07   0.00051       3      54 .]      79     131 ..      77     131 .. 0.89

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.12
    PF13637.1  5 LhyaaisgrlelvklLlekg 24
                 +++a+  g+ ++v+ L+ +g
  MMETSP1325-20131115|12613_1 48 MDVAIEEGDFDTVANLVRNG 67
                 57899999999999998432 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 1.9e-07
    PF13637.1   3 taLhyaaisgrlelvklLlekgidinrt.desGntaLhiAalrgnieilklLl 54 
                  t++ +a+   +  ++  L+e g d+n+     G+ +L + ++ gn+++lk Ll
  MMETSP1325-20131115|12613_1  79 TPFVKAMTEENSAALVNLVELGSDVNYPlSTTGERPLMYGVRLGNVDMLKILL 131
                  666677778888888899***********999******************997 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.47   1.3e+03      22      40 ..      50      71 ..      47      75 .. 0.75
   2 ?    1.6   0.0      0.12   3.3e+02       7      43 ..      71     104 ..      63     106 .. 0.75
   3 !   14.4   0.0   1.1e-05      0.03       2      41 ..      97     136 ..      96     138 .] 0.81

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.47
    PF13857.1 22 lAakggalevvrlLl...apga 40
                 +A++ g+ + v  L+   +++ 
  MMETSP1325-20131115|12613_1 50 VAIEEGDFDTVANLVrngNYPI 71
                 6888999999999986555555 PP

  == domain 2    score: 1.6 bits;  conditional E-value: 0.12
    PF13857.1   7 advnatdeggntpLhlAakggalevvrlLlapgadln 43 
                  +d+ a   +g+tp+ +A    ++ ++  L++ g+d n
  MMETSP1325-20131115|12613_1  71 IDHEA---EGVTPFVKAMTEENSAALVNLVELGSDVN 104
                  45544...46699999999888889999998888877 PP

  == domain 3    score: 14.4 bits;  conditional E-value: 1.1e-05
    PF13857.1   2 lehgpadvnatdeggntpLhlAakggalevvrlLlapgad 41 
                  +e g++++  + ++g+ pL++ ++ g+++++++Ll++ga+
  MMETSP1325-20131115|12613_1  97 VELGSDVNYPLSTTGERPLMYGVRLGNVDMLKILLNYGAN 136
                  5666444445567899*********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 734.88
//
Query:       MMETSP1325-20131115|12615_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0063   16.3   0.5      0.021   14.5   0.4    1.8  1  PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
       0.12   10.7   0.0       0.13   10.5   0.0    1.1  1  PF00290.15 Tryptophan synthase alpha chain


Domain annotation for each model (and alignments):
>> PF07992.9  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4   3.1e-06     0.021     169     198 ..      49      79 ..       9      81 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.1e-06
                  -BESSSSBBE-T.TSBCSSTTEEE---TCEE CS
                  xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
    PF07992.9 169 eldprggivVde.ylrtsvpgiyaiGDvaeg 198
                    d+ g+i +   +  tsv g+ya+GDva++
  MMETSP1325-20131115|12615_1  49 RKDSEGYIYTIPgSTVTSVTGVYAAGDVADP 79 
                  556667775555244689***********86 PP

>> PF00290.15  Tryptophan synthase alpha chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   1.9e-05      0.13     138     180 ..      27      70 ..      20      88 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 1.9e-05
                  TT---BEEE-TTS-H.HHHHHHHHH----EEE-S--------SS CS
   PF00290.15 138 kgielvflvapttsd.erlkeivekaegfvYlvsraGvTGarea 180
                   +++ vf++   t++ +  +++ +++eg++Y +    vT++   
  MMETSP1325-20131115|12615_1  27 LDVDGVFVAIGHTPNtQLFRTVRKDSEGYIYTIPGSTVTSVTGV 70 
                  56677777666665515668999*********988888877653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|12623_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-14   53.3   0.0    3.7e-14   52.9   0.0    1.1  1  PF00005.22 ABC transporter


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.0   2.7e-18   3.7e-14      16     118 .]      35     144 ..      30     144 .. 0.93

  Alignments for each domain:
  == domain 1    score: 52.9 bits;  conditional E-value: 2.7e-18
                  --EEE-..--BGGGB-HHHHH..EEEE-------.--BHHHHHH----S---HHHHHHHHHH---HHHH--..........----------HHHHHHHHHHTT--SEEEEESTTT CS
                  xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00005.22  16 geievdndrkdlesdkleklr..igyipqdpllfpeltvrenldmakeekktdkrieevlekvgldelldk..........srvstLSgGqkqrvalArallkkpklllLDEPtn 118
                  g+i +d  + d++   l++lr  +  ipqdp lf + t+r+nld++ ++   d+ +  +l+ vgl  l+++           r+++LS Gq+  v+++r ll+k+++++LDE+t+
  MMETSP1325-20131115|12623_1  35 GRILID--GVDISTVGLHTLRksMTIIPQDPVLF-SGTLRRNLDPFNDY--PDHLLWSALRSVGLARLVEDrgaglamkiePRGENLSVGQRALVCICRGLLRKSRIVVLDEATA 144
                  778888..456788888899999***********.***********999..7***************88888********99*******************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 776.21
//
Query:       MMETSP1325-20131115|12622_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.15   11.5   2.4       0.32   10.5   1.7    1.6  1  PF00383.17 Cytidine and deoxycytidylate deaminase zinc-binding region


Domain annotation for each model (and alignments):
>> PF00383.17  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.7   2.4e-05      0.32      16      79 ..      49     136 ..      35     153 .. 0.66

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 2.4e-05
                  TT-BTTTSB----EEEETTSSBEE----BCCSSCC................CTB-HHHHHHHHHHHH-CCCETTEEEEE..........E CS
   PF00383.17  16 keaykcsnfkvGavivkkngeiistgyngepaggs................ktiHAEvnAilsaaknggsklegatlyv..........t 79 
                  +e + +  ++ +av++++++ + +  +  + a  +                  +HAE+ A++ ++k +++k+  +t++v           
  MMETSP1325-20131115|12622_1  49 QEQQSDRVVRLAAVLLRSSRVVKVFPCSLASARVNvpgadssmvsrlseqgGSCHAERHALRYMTKANKTKA--NTMVVmrlgardxasL 136
                  44446666777777777544444444444444444777788888888888889************9954454..8888866666665543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1250  (0.0914277); expected 273.4 (0.02)
Passed bias filter:                      794  (0.0580749); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.41s 00:00:00.98 Elapsed: 00:00:00.68
# Mc/sec: 725.96
//
Query:       MMETSP1325-20131115|12628_1  [L=141]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 689.56
//
Query:       MMETSP1325-20131115|12632_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 213.49
//
Query:       MMETSP1325-20131115|12634_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 579.92
//
Query:       MMETSP1325-20131115|12638_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       379  (0.0277209); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 324.21
//
Query:       MMETSP1325-20131115|12642_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-07   29.7   1.8    0.00012   21.8   0.2    2.9  2  PF03160.9 Calx-beta domain


Domain annotation for each model (and alignments):
>> PF03160.9  Calx-beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.2   8.7e-09   0.00012      12      94 ..      11     114 ..       4     120 .. 0.87
   2 ?   -0.1   0.1     0.057   7.8e+02      45      63 ..     116     134 ..     110     147 .. 0.70

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 8.7e-09
    PF03160.9  12 vvgfeeeeysvlEndge.vevcVvrksgelerkvtVsyrtedgt.................Aka..gsDYeavegeLtFepgetekeinvtiidddvleed.en 94 
                  +v f ++e+  +E+  + v++   r+++  ++ +tV y+t+d t                 A+     DY + +ge+tF +g t   + + +i+d+ le   e 
  MMETSP1325-20131115|12642_1  11 RVYFRQAEFYGTEGTDSyVTIYLDRDEDYADEALTVAYATSDLTakgvdtkkfaacmdsvlANRegCGDYLQAAGEVTFTAGATSALFVIYLINDKCLEHYqEY 114
                  689999999999999988999999999999**************999999999999999997764347*****************************9986344 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.057
    PF03160.9  45 tVsyrtedgtAkagsDYea 63 
                  + +++   g+A  g+DY+a
  MMETSP1325-20131115|12642_1 116 QLTLSVPGGSAAIGEDYVA 134
                  5556666688888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       324  (0.0236981); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 814.76
//
Query:       MMETSP1325-20131115|12644_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.68
# Mc/sec: 348.88
//
Query:       MMETSP1325-20131115|12643_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-11   44.4   0.3    1.6e-11   44.1   0.2    1.0  1  PF04258.8 Signal peptide peptidase


Domain annotation for each model (and alignments):
>> PF04258.8  Signal peptide peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.2   1.1e-15   1.6e-11     240     297 ..     149     206 ..     137     207 .. 0.93

  Alignments for each domain:
  == domain 1    score: 44.1 bits;  conditional E-value: 1.1e-15
    PF04258.8 240 sriYfvvtlvaYglGLlitivalalfkaaQPALLYlvPatLltllllallrgelkklw 297
                  +  Yf+ +  +Y+ G+l +++ ++++  aQPALLYlvP +L+++++ ++  g l  lw
  MMETSP1325-20131115|12643_1 149 QTAYFYRARWGYISGILAAVFFSQVMGIAQPALLYLVPGVLGPIVTRGYRLGHLTLLW 206
                  456**********************************************999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.37s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 1076.01
//
Query:       MMETSP1325-20131115|12659_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0049   16.5   0.1      0.006   16.2   0.0    1.1  1  PF00833.13 Ribosomal S17
  ------ inclusion threshold ------
        4.8    6.3   5.4        4.7    6.3   3.8    1.1  1  PF05308.6  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF00833.13  Ribosomal S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   8.8e-07     0.006      34      50 ..       2      18 ..       1      20 [. 0.93

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 8.8e-07
                 TTTTTTSS--SS-GGGT CS
   PF00833.13 34 iveevaiipSkrLrnki 50
                 iv+eva++pSkr+rnk+
  MMETSP1325-20131115|12659_1  2 IVDEVAVVPSKRMRNKV 18
                 89**************8 PP

>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   3.8   0.00069       4.7     177     200 ..      10      34 ..       2      45 .. 0.57

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00069
    PF05308.6 177 isdpteepe.levppppppPpPlpa 200
                   s+  ++ + l v pppppP P p+
  MMETSP1325-20131115|12659_1  10 PSKRMRNKVcLRVRPPPPPPLPRPP 34 
                  3433333220334477777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                       95  (0.00694851); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 235.20
//
Query:       MMETSP1325-20131115|12660_1  [L=241]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.55
# Mc/sec: 1050.04
//
Query:       MMETSP1325-20131115|12669_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-54  184.5   0.0    1.4e-54  184.2   0.0    1.1  1  PF01163.17 RIO1 family
      3e-09   36.8   0.6    6.6e-09   35.7   0.1    1.6  2  PF01636.18 Phosphotransferase enzyme family
    0.00014   20.9   0.6    0.00072   18.5   0.4    2.0  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0065   15.5   0.0     0.0091   15.0   0.0    1.1  1  PF00069.20 Protein kinase domain


Domain annotation for each model (and alignments):
>> PF01163.17  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.2   0.0     4e-58   1.4e-54      10     184 ..      45     225 ..      30     228 .. 0.94

  Alignments for each domain:
  == domain 1    score: 184.2 bits;  conditional E-value: 4e-58
                  ---EEEEEE-S---SS-HHHHHT---TTS-GG...G--HHHHHHHHHHHHHHHHHHCHH----S--EEEEETTEEEEE----TTCEGGCTTTS-......-HHHGCHHHHHHHHHHHHHCS-EEESS-STTSEEEESSSEEE---TTEEETTSTTHHHHHHHHHHHHHHHHHCHH--.--H CS
   PF01163.17  10 gkevavKiyktstteFkkvkkyvdgdarfkdr.ksktnprklvklwaekEfrnLkrleeagvrvPkpialkrnvlvmefigedgvaapklkdvel.....eeaeelyeeileemrklykeaglvHaDLSeyNvlvdedkvviIDvsQaveldhpnalefLerDveniikfFrrkgveavde 184
                   + va+K++ ts+ +F ++++yvdgd+r++ r +sk+++rk++k+waekE+rnL+r+++ag+ +P+pi  k+++l+m fig+ g++ap+l+dv       + +++ y ++l  +r l+++a lvHaDLSeyN+l+ +++v++ID++Qav++ h++ l+fL+ D++n+ kfF  + v+++d 
  MMETSP1325-20131115|12669_1  45 ATPVALKLFFTSLDQFSNRSEYVDGDPRYRGRgFSKQSKRKMIKTWAEKEYRNLTRVHRAGMACPQPILQKEHILLMTFIGRAGWPAPQLHDVAKsqltrSAWHRTYLQTLGVVRDLWHRASLVHADLSEYNLLYFDKRVYVIDLGQAVDTGHQDVLKFLRIDLRNVLKFFASRQVAVHDL 225
                  4589*************************976379**********************************************************9988898889999******************************************************************999987665 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.1   1.9e-12   6.6e-09      75     196 ..      65     193 ..      60     212 .. 0.75
   2 ?   -1.4   0.0      0.41   1.4e+03      62      84 ..     244     266 ..     192     294 .. 0.49

  Alignments for each domain:
  == domain 1    score: 35.7 bits;  conditional E-value: 1.9e-12
                  E---HHBCCT..CSHHHHHHHHHHHHH....HHHHHHHHS--TTSHGG..........HCTBCTHHHHHHHHHHHH.HHHHHCTHHHHHHHHHHHHHHHHHHHHCSS--EEB-SS-SGGGEEEETTTTEEEE---TT-B CS
   PF01636.18  75 eyvpgevler..klnarqlpalleala....ellaalhqadpaadpla..........dflapyltllrllesata.alvasellelleeleervlaalaallpgaeppvllHgDlhpgNllvdpddgrvgviDfedag 196
                  eyv+g +++r    + + ++ +++ +a    + l ++h+a++a +p++           f  +  +++++l++  + +l +s++ +       + l    +l++   +++l+H Dl+  Nll+   d rv+viD++ a 
  MMETSP1325-20131115|12669_1  65 EYVDGDPRYRgrGFSKQSKRKMIKTWAekeyRNLTRVHRAGMA-CPQPilqkehillmTFIGRAGWPAPQLHDVAKsQLTRSAWHR----TYLQTLGVVRDLWH---RASLVHADLSEYNLLYF--DKRVYVIDLGQAV 193
                  79999999999867777777777777722225788*****655.777755555555554444556667777777665666666666....555599********...8****************..9********9886 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.41
                  E-CSSCSCEEEEEE---HHBCCT CS
   PF01636.18  62 tdddvlgllfalleyvpgevler 84 
                   d+++    + ll++ pg   e 
  MMETSP1325-20131115|12669_1 244 GDHTHEMAAANLLTSMPGSEGEV 266
                  23333333444444444444444 PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.4   2.1e-07   0.00072      36     170 ..      73     194 ..      60     227 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 2.1e-07
    PF06293.9  36 yrggllgklvrdlyrfklgetrsvrEfrllkrLreagvpvpkpvaaaaqkvgleyqAdllteklegaqdLaeilakwae.laeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDldkarr 170
                  yrg+ + k ++     k+ +t + +E+r+l r ++ag++ p+p+  ++    +      + ++  +a  L +++++  +   ++ +r+ l+ +G +    hra + H+dl+  n+l  +++    v++iDl +a+ 
  MMETSP1325-20131115|12669_1  73 YRGRGFSKQSKR----KMIKTWAEKEYRNLTRVHRAGMACPQPILQKEH---ILLM-TFIGRAGWPAPQLHDVAKS--QlTRSAWHRTYLQTLGVVRDLWHRASLVHADLSEYNLLYFDKR----VYVIDLGQAVD 194
                  677777666665....78899999********************98777...3332.3456777889999999998..549999************999****************999985....*****988765 PP

>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.7e-06    0.0091      43     149 ..      89     195 ..      72     207 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.7e-06
                  HHHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-....EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHH.HHTCEE-S--SGGGEEEETT--EEE------EEEC CS
   PF00069.20  43 ktavrElkilkklsHpnivkllevfeekdelylvleyvegg....dlfdllkkegklseeeikkialqilegleyl.HsngiiHrDLKpeNiLldkkgelkiaDFGlakkle 149
                    a +E++ l+++ H   + + + + +k++++l++ + ++g    +l+d+ k   +l+     +  lq+l  ++ l H+ +++H DL   N+L   ++++ ++D+G a   +
  MMETSP1325-20131115|12669_1  89 TWAEKEYRNLTRV-HRAGMACPQPILQKEHILLMTFIGRAGwpapQLHDVAK--SQLTRSAWHRTYLQTLGVVRDLwHRASLVHADLSEYNLLYF-DKRVYVIDLGQAVD-T 195
                  2233377777777.77777777777788888888888888888877777666..88888888889999999997664889**************9.99*********986.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       306  (0.0223815); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1390.83
//
Query:       MMETSP1325-20131115|12672_1  [L=244]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.8e-05   22.4   0.0    0.00072   19.2   0.0    2.4  2  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   5.3e-08   0.00072       2      37 .]       5      42 ..       4      42 .. 0.94
   2 ?    0.3   0.0     0.044     6e+02      15      25 ..     206     216 ..     206     218 .. 0.84

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 5.3e-08
                 THHHHHHHHH-..---HHHHHHHHHHTTTSHHHHHHHH CS
   PF00627.26  2 deeaiqqLreM..GfsreeakkALratnnnvErAveyL 37
                 + e++ qL+    G+s++ ++ AL +t +++++A  yL
  MMETSP1325-20131115|12672_1  5 SKETLDQLMRAdaGYSKDLVLSALLSTLGDPDAALSYL 42
                 5789999999999**********************998 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 0.044
                  -HHHHHHHHHH CS
   PF00627.26  15 sreeakkALra 25 
                  +++ a++ALra
  MMETSP1325-20131115|12672_1 206 DESVATRALRA 216
                  57899****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       414  (0.0302809); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 1271.11
//
Query:       MMETSP1325-20131115|12671_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-53  179.4   0.0    2.5e-53  179.1   0.0    1.0  1  PF01090.14 Ribosomal protein S19e
  ------ inclusion threshold ------
      0.033   13.2   0.0      0.049   12.6   0.0    1.2  1  PF08532.5  Beta-galactosidase trimerisation domain


Domain annotation for each model (and alignments):
>> PF01090.14  Ribosomal protein S19e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.1   0.0   3.6e-57   2.5e-53       1     137 [.       9     145 ..       9     147 .. 0.99

  Alignments for each domain:
  == domain 1    score: 179.1 bits;  conditional E-value: 3.6e-57
   PF01090.14   1 vtvkdVpadelikalaekLkkegkikvpewadlvKtgvakelaPededwwyvRaAsilRkvylrgpvGverlrkvYggkkrrgvkpekfvkgsgsvirkalqqLekaglvekdekgGrrltkkGrsllDkiAaevlk 137
                  +tv+dVp+ e+i+++a++Lk+++k + p+wad+vKtg++kelaP+d+dw+y+RaA+i+Rk+yl+ ++Gv++l++ +gg+k+rg++  +f ++ g +ir++lqqLe++++vek+ k+Gr++++ G+ +lD+iA +v++
  MMETSP1325-20131115|12671_1   9 ITVRDVPPAEFIATYAAHLKNSDKFELPKWADIVKTGTNKELAPYDQDWYYTRAAAIARKIYLQPGLGVGALKRKFGGSKNRGTRTFTFGNAAGGIIRNILQQLEEIKVVEKSGKSGRVISRVGQVDLDRIAGQVAQ 145
                  69************************************************************************************************************************************986 PP

>> PF08532.5  Beta-galactosidase trimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   7.2e-06     0.049     135     176 ..      28      70 ..       8      75 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7.2e-06
                  ----.EEE--EEEEE...E-SSSEEE--....--.-EEEE-.. CS
    PF08532.5 135 adgkkyearlwcevvepegaevlatykddfyagt.pAvtrnny 176
                  ++ +k+e+ +w+++v++ + + la y +d+y  + +A+ r+ y
  MMETSP1325-20131115|12671_1  28 KNSDKFELPKWADIVKTGTNKELAPYDQDWYYTRaAAIARKIY 70 
                  34556899********************998855388888855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       445  (0.0325483); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.38s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 828.74
//
Query:       MMETSP1325-20131115|12670_1  [L=463]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-20   72.6   0.0    3.2e-20   72.6   0.0    2.6  2  PF01145.20 SPFH domain / Band 7 family
     0.0021   17.4   0.1     0.0051   16.2   0.0    1.6  1  PF13421.1  SPFH domain-Band 7 family


Domain annotation for each model (and alignments):
>> PF01145.20  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.0   4.7e-24   3.2e-20       6     171 ..      58     229 ..      53     244 .. 0.86
   2 ?   -1.8   1.3      0.32   2.2e+03     154     176 ..     288     309 ..     283     313 .. 0.76

  Alignments for each domain:
  == domain 1    score: 72.6 bits;  conditional E-value: 4.7e-24
   PF01145.20   6 gevgvvvrfGkvkr....vlepGlhfklPfgekvt.vvstrvqtldvsdesvtvptkDglnvtvdvtvryrv...sdakkliaavaqeeenlenllrrllesalrevl...sqmtldeilsnrselaaelknelneqlqkygievvdvritdvdpppevkqalakkqaaeaeaaeae 171
                  g +++ + f + k+    v++pGl+f +P ++++  +vs ++++++ ++    vpt+D++ v+++v++++ +   + ak +++++  + + l++ll +++e+ +r+++   ++ ++ ++ s+ s+ +a+++++l e+l kyg+++ +  it+ ++p +++q+l++  +   e + ae
  MMETSP1325-20131115|12670_1  58 GSHVLWEVFEQSKDmdpsVYGPGLKFFIPAWKRIShIVSAQTISYSAPA--RGVPTADNILVDLNVVIQFTIpdpESAKLFVYKL--GAKRLDALLAAACEEGVRALVygsNHENVMDLASS-SGSTAAIQASLTENLHKYGVQIRSMIITKTKLPSDLQQRLENTTTMISEMENAE 229
                  555555446666667789***********6666666*************..**********************************..*********************66555555666666.****************************************99998887775333 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 0.32
   PF01145.20 154 kqalakkqaaeaeaaeaeiarae 176
                  ++a+a+ q+a  ++ ++e++ ae
  MMETSP1325-20131115|12670_1 288 DNAMAAQQRAALKN-KHEQEMAE 309
                  56788888888888.77777776 PP

>> PF13421.1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   7.5e-07    0.0051     153     209 ..     166     221 ..     144     223 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 7.5e-07
    PF13421.1 153 kipvldlaanseelseklreaikkelaeyGleleellienislpeevekaldkrssm 209
                  +  v+dla++s + ++ +++ ++++l++yG+++ ++ i +  lp ++++ l++ ++m
  MMETSP1325-20131115|12670_1 166 HENVMDLASSSGS-TAAIQASLTENLHKYGVQIRSMIITKTKLPSDLQQRLENTTTM 221
                  5568899887776.5679**********************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1074  (0.0785547); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.83u 0.35s 00:00:01.18 Elapsed: 00:00:00.60
# Mc/sec: 1849.19
//
Query:       MMETSP1325-20131115|12673_1  [L=267]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-36  124.8   0.0    3.3e-36  124.5   0.0    1.0  1  PF01987.12 Mitochondrial biogenesis AIM24


Domain annotation for each model (and alignments):
>> PF01987.12  Mitochondrial biogenesis AIM24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.5   0.0   2.4e-40   3.3e-36       2     214 ..      31     232 ..      30     233 .. 0.91

  Alignments for each domain:
  == domain 1    score: 124.5 bits;  conditional E-value: 2.4e-40
                  EE-SS-SS--EEEE------EEEE---EEEE-TTEEEE-TT----.--------TTT----TTEEEEEE.-----EEE--S----EEEE-----...-EEEE---EEEE----EEEEEE-.------------EEEEEE----EEEE----EEEE---.---EEEEGGGEEEEETTSEEEEE----....-TTT-------EE.EEE----EEEES- CS
   PF01987.12   2 eielgdnasllevtLkpgeevyaeaGamvamsgkvefetklstgglggllkalkralggeslfqteftaatgpgevllapsspgdisvleLdgg..eallvqkgaflaaspgvqldlsfa.glgkglfggeglfltkltGrGlvalssyGaivelelaegeelvvdpghvvAwsgtlnyevekvkgslsglksalfsGeglfl.eftGpGkVllqsr 214
                  +i  g+++++l +++ +ge+v +e+G+m++ms+ ++ +    t      ++a +r++gge  f +++ +a+ pg + l p++ g++++++L     ++ll ++ga++a  ++ + +  +  + +++  gg+g + ++++G+G ++l++ G i++++la+ge + +dp  ++Aw+++++ +++++     g  +a  sGe++f  ++tGpG+V+lq++
  MMETSP1325-20131115|12673_1  31 DIV-GADSQILTIKVGEGEKVQTEPGTMMMMSPGIKPSI---T-----CEQACGRCVGGEPCF-NVIYTAEKPGFIGLTPNFMGKVIPVDLGMIqnNKLLSKDGAYMAGLGEAKPNFDLDcNPATACCGGQGCVRQSVEGTGVAFLAAGGHILKKTLADGESVLIDPAGLMAWEEQVDLSIKFA-----GCCNACCSGESMFQtKMTGPGTVYLQTM 232
                  676.99******************************999...5.....789************.5555899********************7767899**********866664444444445589*********************************************************9.....699*********999***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      279  (0.0204067); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.74
# Mc/sec: 864.63
//
Query:       MMETSP1325-20131115|12674_1  [L=278]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-21   73.8   3.1    7.2e-14   51.4   0.1    2.5  2  PF00808.18 Histone-like transcription factor (CBF/NF-Y) and archaeal histone
     0.0034   17.3   1.6     0.0059   16.5   0.1    2.0  2  PF00125.19 Core histone H2A/H2B/H3/H4


Domain annotation for each model (and alignments):
>> PF00808.18  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.2   9.8e-09   6.7e-05       3      48 ..      52      97 ..      50     113 .. 0.87
   2 !   51.4   0.1     1e-17   7.2e-14       2      65 .]     138     204 ..     137     204 .. 0.94

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 9.8e-09
                 --HHHHHHHHHHHTT--.B-HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF00808.18  3 LPiarvkkImksdpdarkiskdAkeliaecveefieelaseAaeic 48
                 LP+a+v kI k+d+d r+ +k+A  + ++++ +f+++la eA e++
  MMETSP1325-20131115|12674_1 52 LPQANVLKISKQDQDLRMEAKQATAVKTKACDLFARQLAWEAMEVM 97
                 9******************************************986 PP

  == domain 2    score: 51.4 bits;  conditional E-value: 1e-17
                  ---HHHHHHHHHHH...TT--.B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH CS
   PF00808.18   2 eLPiarvkkImksd...pdarkiskdAkeliaecveefieelaseAaeickkekrKTikaediklav 65 
                   LP a++ ++mk+    pd++k+s++Ak+++a+cv+efi  ++seA++ + +++r T++a+d+++++
  MMETSP1325-20131115|12674_1 138 NLPVANIYRLMKKPgvlPDDAKVSESAKKMVARCVKEFICVITSEASDRVIEDRRATVTANDVLHVL 204
                  79**********94458**********************************************9875 PP

>> PF00125.19  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.33   2.3e+03      53      53 ..      95      95 ..      57     116 .. 0.52
   2 !   16.5   0.1   8.6e-07    0.0059       6      72 ..     139     204 ..     132     206 .. 0.82

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.33
   PF00125.19 53 l 53
                  
  MMETSP1325-20131115|12674_1 95 E 95
                 2 PP

  == domain 2    score: 16.5 bits;  conditional E-value: 8.6e-07
   PF00125.19   6 ilklpvsRvvrelkegfyaelrisaealvalqealedlleeiledAgllaehakrktitprdiqlAv 72 
                   + + ++R+++  ++   +  ++s +a ++++  ++ ++  i+++A+  +++ +r t+t+ d+ +++
  MMETSP1325-20131115|12674_1 139 LPVANIYRLMKKPGVLPDD-AKVSESAKKMVARCVKEFICVITSEASDRVIEDRRATVTANDVLHVL 204
                  4445566777776664344.6******************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1387.89
//
Query:       MMETSP1325-20131115|12676_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.2   0.2      0.049   12.9   0.1    1.3  1  PF02920.10 DNA binding domain of tn916 integrase


Domain annotation for each model (and alignments):
>> PF02920.10  DNA binding domain of tn916 integrase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   3.6e-06     0.049      13      52 ..      22      63 ..      10      64 .] 0.82

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 3.6e-06
                 ---EE-----E.EEEEE-----EEEEEES.-SSTTS------ CS
   PF02920.10 13 kgeeqrkdlRy.lkkyvdeleeerfvYsW.Klvatdaapagk 52
                 +ge   ++lRy +   +++ ++++  Y W  +  t+ ++a +
  MMETSP1325-20131115|12676_1 22 QGEHCFQELRYsITSQLESQMDPKLYYHWgSWSQTEGQQATR 63
                 577888*****55689*************5588888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|12675_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       548  (0.0400819); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.33s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 1040.12
//
Query:       MMETSP1325-20131115|12681_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       235  (0.0171884); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 348.56
//
Query:       MMETSP1325-20131115|12682_1  [L=43]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.51
# Mc/sec: 202.05
//
Query:       MMETSP1325-20131115|12684_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        9.1    6.1  13.2       0.95    9.2   6.0    1.7  2  PF04554.8 Extensin-like region


Domain annotation for each model (and alignments):
>> PF04554.8  Extensin-like region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   6.0     7e-05      0.95      21      57 ..       5      45 ..       4      46 .. 0.64
   2 ?   -2.7   0.1      0.36   4.9e+03      45      47 ..      67      69 ..      62      70 .. 0.52

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 7e-05
    PF04554.8 21 ksPPPpspykYksPPPpvykyksPpPpkk.....ykYksPPP 57
                 ++PPP+   +Y++PPP     +s +P  +        +s PP
  MMETSP1325-20131115|12684_1  5 HQPPPHLNGMYDEPPPKRG-RRSASPHATpydngLAHTSAPP 45
                 6899995569****99643.3566666544455655555555 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.36
    PF04554.8 45 pPp 47
                 +Pp
  MMETSP1325-20131115|12684_1 67 APP 69
                 222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       105  (0.00767993); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|12685_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0016   18.2   3.3     0.0016   18.2   2.3    1.8  2  PF09486.5  Bacterial type III secretion protein (HrpB7)
  ------ inclusion threshold ------
        0.5    9.8   3.1       0.98    8.8   2.1    1.5  1  PF04156.9  IncA protein
       0.62    8.8   4.2        1.3    7.8   2.5    1.7  2  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
          5    6.5   8.1       0.14   11.5   0.2    2.3  3  PF04977.10 Septum formation initiator
          9    6.0  11.3       0.63    9.7   0.4    2.9  2  PF14235.1  Domain of unknown function (DUF4337)


Domain annotation for each model (and alignments):
>> PF09486.5  Bacterial type III secretion protein (HrpB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   2.3   5.9e-07    0.0016      17     115 ..      17     116 ..       4     134 .. 0.89
   2 ?   -2.5   0.1       1.4   3.9e+03      16     114 ..     199     205 ..     178     216 .. 0.47

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 5.9e-07
    PF09486.5  17 derlraelsalraalealdrelaecraaveakadrlaahdarlddlagggasltid...aylqlrryrdvlveelaaaeqavaaarqalqakvaelaavrre 115
                   +r  +el++++a+l++l +  ++c + ++a + ++++   +++++  +++ l++d   +++  +++r  l+++ + a +    a q l+  +a l+a+ +e
  MMETSP1325-20131115|12685_1  17 GRRPSEELKDCKARLKELRGRYKACANSINASKGEIDELTDAIQEKKIARERLNLDgeeDIVDEEEFR--LMKRQREAKKVYRTAYQDLNGLKADLEATTKE 116
                  67889******************************************99*****975558*******9..78889999999999999999999999988664 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.4
    PF09486.5  16 rderlraelsalraalealdrelaecraaveakadrlaahdarlddlagggasltidaylqlrryrdvlveelaaaeqavaaarqalqakvaelaavrr 114
                  r                                                                                              a++ 
  MMETSP1325-20131115|12685_1 199 R--------------------------------------------------------------------------------------------ATATQN 205
                  1............................................................................................122222 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.1   0.00036      0.98     101     189 ..      21     115 ..       9     117 .. 0.73

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.00036
    PF04156.9 101 eerlaeleseledleedlellqeelksleerlesleesikelakeirelr....eeisdlkeevqelrselerl..qedlqrlqeklaelqrlle 189
                  +e+l++++++l++l+  ++ +    ++ + ++++l+++i+e+    ++l     e i d++e   ++r++ ++   ++++q+l+   a+l+++ +
  MMETSP1325-20131115|12685_1  21 SEELKDCKARLKELRGRYKACANSINASKGEIDELTDAIQEKKIARERLNldgeEDIVDEEEFRLMKRQREAKKvyRTAYQDLNGLKADLEATTK 115
                  57888999999999999999998888999999999888887766666666778844444444433333322222359999999999999988765 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.5   0.00046       1.3      64     112 ..      23      72 ..      18     109 .. 0.73
   2 ?   -0.9   0.1       0.2   5.5e+02      92     118 ..      88     115 ..      80     126 .. 0.50

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.00046
    PF10186.4  64 evaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.asaq 112
                  e + +k+r++++r r +++ + i + + +i+el +a+++++   e  + +
  MMETSP1325-20131115|12685_1  23 ELKDCKARLKELRGRYKACANSINASKGEIDELTDAIQEKKIARErLNLD 72 
                  56789********************************9998755543333 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 0.2
    PF10186.4  92 rieelkealaqrrsdle.asaqlekrra 118
                  r++e k+  ++ ++dl+  +a+le++ +
  MMETSP1325-20131115|12685_1  88 RQREAKKVYRTAYQDLNgLKADLEATTK 115
                  3334444444444444444444443333 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   5.2e-05      0.14      16      74 ..      21      78 ..      11      79 .. 0.85
   2 ?   -1.1   0.0      0.42   1.2e+03      20      39 ..     101     116 ..      92     124 .. 0.51
   3 ?   -3.8   0.7       2.9     8e+03      31      36 ..     204     209 ..     192     217 .. 0.37

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5.2e-05
   PF04977.10 16 llalyqlkqeiaalqaelaklkaeneeLeaevkdLksdedyieeqARselglvkpgEtv 74
                   +l++ k+ +++l   +++  + +++ + e+++L+ d    +++AR++l+l  + ++v
  MMETSP1325-20131115|12685_1 21 SEELKDCKARLKELRGRYKACANSINASKGEIDELT-DAIQEKKIARERLNLDGEEDIV 78
                 567788899999999999999**************5.55555689********999987 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.42
   PF04977.10  20 yqlkqeiaalqaelaklkae 39 
                  ++l    + l+a+l++  +e
  MMETSP1325-20131115|12685_1 101 QDL----NGLKADLEATTKE 116
                  333....3333333333333 PP

  == domain 3    score: -3.8 bits;  conditional E-value: 2.9
   PF04977.10  31 aelakl 36 
                  ++ +++
  MMETSP1325-20131115|12685_1 204 QNHVAI 209
                  222222 PP

>> PF14235.1  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   3.0      0.42   1.2e+03      68     102 ..      28      62 ..      11     134 .. 0.66
   2 ?    9.7   0.4   0.00023      0.63      38      66 ..     186     214 ..     175     218 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.42
    PF14235.1  68 aaelkkkiekykkekkrikseakeleakakeaeee 102
                  +a+lk+   +yk+ +++i++ + e+ +  ++++e+
  MMETSP1325-20131115|12685_1  28 KARLKELRGRYKACANSINASKGEIDELTDAIQEK 62 
                  45555555555555555555544443333333332 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00023
    PF14235.1  38 sdqWafYQAksikqtlaelaaelleleak 66 
                   d+ af+QA+++k+++a +++ ++++++k
  MMETSP1325-20131115|12685_1 186 PDALAFFQAQKTKRATATQNHVAIKQAQK 214
                  5888*************999998887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       789  (0.0577092); expected 273.4 (0.02)
Passed bias filter:                      433  (0.0316706); expected 273.4 (0.02)
Passed Vit filter:                        57  (0.0041691); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.50
# Mc/sec: 1049.60
//
Query:       MMETSP1325-20131115|12693_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|12696_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-17   63.2  13.9    3.2e-17   63.0   9.7    1.0  1  PF01086.12 Clathrin light chain
  ------ inclusion threshold ------
       0.24   11.2   8.9       0.28   11.0   6.2    1.1  1  PF03938.9  Outer membrane protein (OmpH-like)
        4.1    6.7   9.0        5.5    6.3   6.2    1.2  1  PF06936.6  Selenoprotein S (SelS)


Domain annotation for each model (and alignments):
>> PF01086.12  Clathrin light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   9.7   7.1e-21   3.2e-17     111     220 ..      14     125 ..       2     126 .] 0.92

  Alignments for each domain:
  == domain 1    score: 63.0 bits;  conditional E-value: 7.1e-21
   PF01086.12 111 pesireWreerdkeieerdeasekkkeeliekAkkeiddfYenynekkektkaqtrkeeeeflaerddt..skdgTeWervakLvdfsdkgskqgkdksRfrelLlsLKkde 220
                     ++e  e+ ++e++ +++++e++++ ++ekAk+e+ ++ ++++ ++e + +q+r+ee+  l++ + +   ++g  Werv+kLv+++  ++    d+sR+++++l++K ++
  MMETSP1325-20131115|12696_1  14 NAKLNEFNEKWEAELAAKAAEEEATRQTMVEKAKEELAEWEKQQEVQRESKTSQNRQEEQVVLEDIEREmdPENGNPWERVVKLVEIKAEPAEGELDVSRMKSIFLQMKNKQ 125
                  66789999********************************************************98877456789**********************************766 PP

>> PF03938.9  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   6.2   6.1e-05      0.28      35     106 ..      11      86 ..       4     114 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.1e-05
    PF03938.9  35 kelqaklqeeakekqqelqakkkel....qkeqknlqseraqlsaeaekakeeelqakeqelqayaqqlqaelqae 106
                   + +akl+e+ +++++el+ak++e     q+++++ ++e a + +++e ++e +  + +qe q   +++++e+  e
  MMETSP1325-20131115|12696_1  11 DADNAKLNEFNEKWEAELAAKAAEEeatrQTMVEKAKEELAEWEKQQEVQRESKTSQNRQEEQVVLEDIEREMDPE 86 
                  4556667777666666666666655555566666666666666666666666666666666666666666666555 PP

>> PF06936.6  Selenoprotein S (SelS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   6.2    0.0012       5.5      88     140 ..      20      72 ..       8      83 .. 0.78

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0012
    PF06936.6  88 arlrmqeeldakaakfkekkkqleeekrrqkiedwdrlqeGk.sykvsaklaee 140
                     ++  el akaa+ +e  +q   ek ++++ +w++ qe +  +k+s++ +ee
  MMETSP1325-20131115|12696_1  20 FNEKWEAELAAKAAE-EEATRQTMVEKAKEELAEWEKQQEVQrESKTSQNRQEE 72 
                  5678999999**998.678899999*************9965155655555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2391  (0.174883); expected 273.4 (0.02)
Passed bias filter:                     1100  (0.0804564); expected 273.4 (0.02)
Passed Vit filter:                       144  (0.0105325); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.44s 00:00:01.00 Elapsed: 00:00:00.48
# Mc/sec: 629.04
//
Query:       MMETSP1325-20131115|12701_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-18   63.1   0.1    9.7e-08   31.3   0.0    2.1  2  PF00023.25 Ankyrin repeat
    7.7e-15   54.8   0.0    8.4e-15   54.7   0.0    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
    2.2e-14   51.9   0.1    5.1e-06   26.1   0.1    2.2  2  PF13606.1  Ankyrin repeat
    5.5e-14   51.7   0.3    8.2e-08   32.1   0.0    2.1  2  PF13857.1  Ankyrin repeats (many copies)
      8e-10   38.8   0.0    1.2e-09   38.2   0.0    1.3  1  PF13637.1  Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   3.6e-11   9.7e-08       1      33 []      22      54 ..      22      54 .. 0.96
   2 !   30.2   0.0   7.6e-11   2.1e-07       2      26 ..      56      80 .]      55      80 .] 0.97

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 3.6e-11
                 TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBHT CS
   PF00023.25  1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd 33
                 +G++PL+ Aa+ ++l+ +k+L+++G+ l ++++
  MMETSP1325-20131115|12701_1 22 NGWSPLMEAASLNHLDACKCLVEHGCQLELRNK 54
                 7***************************99986 PP

  == domain 2    score: 30.2 bits;  conditional E-value: 7.6e-11
                 SCBHHHHHHHTTHHHHHHHHHHTTS CS
   PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGA 26
                 GfT+L+lA++ g l+vv++L+++GA
  MMETSP1325-20131115|12701_1 56 GFTALMLACRDGALSVVRFLVERGA 80
                 9***********************9 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0   3.1e-18   8.4e-15      28      83 ..      23      80 .]       4      80 .] 0.86

  Alignments for each domain:
  == domain 1    score: 54.7 bits;  conditional E-value: 3.1e-18
    PF12796.2 28 t..pLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83
                    pL+ Aa+ ++l+++k+L+e+g++++ ++k+g t+L+lA+r g l +v++L+e+ga
  MMETSP1325-20131115|12701_1 23 GwsPLMEAASLNHLDACKCLVEHGCQLELRNKKGFTALMLACRDGALSVVRFLVERGA 80
                 255****************************************************997 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1   1.9e-09   5.1e-06       1      28 [.      22      49 ..      22      51 .. 0.95
   2 !   24.1   0.0   7.8e-09   2.1e-05       2      26 ..      56      80 .]      55      80 .] 0.96

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 1.9e-09
    PF13606.1  1 nGnTpLhlAasngrielveaLlengadi 28
                 nG++pL+ Aas +++++++ L+e+g+++
  MMETSP1325-20131115|12701_1 22 NGWSPLMEAASLNHLDACKCLVEHGCQL 49
                 8************************986 PP

  == domain 2    score: 24.1 bits;  conditional E-value: 7.8e-09
    PF13606.1  2 GnTpLhlAasngrielveaLlenga 26
                 G T+L+lA++ g +++v++L+e+ga
  MMETSP1325-20131115|12701_1 56 GFTALMLACRDGALSVVRFLVERGA 80
                 99*********************97 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   1.7e-08   4.7e-05      12      52 ..      17      59 ..       7      59 .. 0.84
   2 !   32.1   0.0     3e-11   8.2e-08       1      40 [.      42      80 .]      42      80 .] 0.95

  Alignments for each domain:
  == domain 1    score: 23.3 bits;  conditional E-value: 1.7e-08
    PF13857.1 12 tdeggn..tpLhlAakggalevvrlLlapgadlnlrdsdglta 52
                  + +gn  +pL+ Aa+ ++l++++ L+++g+ l lr++ g ta
  MMETSP1325-20131115|12701_1 17 VESRGNgwSPLMEAASLNHLDACKCLVEHGCQLELRNKKGFTA 59
                 44444455********************************998 PP

  == domain 2    score: 32.1 bits;  conditional E-value: 3e-11
    PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapga 40
                 L+ehg  ++  ++++g+t+L+lA++ gal+vvr+L+++ga
  MMETSP1325-20131115|12701_1 42 LVEHG-CQLELRNKKGFTALMLACRDGALSVVRFLVERGA 80
                 89***.******************************8875 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.0   4.4e-13   1.2e-09       1      54 []      23      76 ..      23      79 .. 0.98

  Alignments for each domain:
  == domain 1    score: 38.2 bits;  conditional E-value: 4.4e-13
    PF13637.1  1 gltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                 g+++L+ aa+ ++l+++k L+e+g ++  ++++G+taL +A++ g ++++++L+
  MMETSP1325-20131115|12701_1 23 GWSPLMEAASLNHLDACKCLVEHGCQLELRNKKGFTALMLACRDGALSVVRFLV 76
                 699*************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 368.67
//
Query:       MMETSP1325-20131115|12702_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-08   33.2   0.0    5.6e-08   32.7   0.0    1.3  1  PF13676.1  TIR domain
  ------ inclusion threshold ------
      0.031   13.5   0.0       0.04   13.2   0.0    1.3  1  PF01582.15 TIR domain


Domain annotation for each model (and alignments):
>> PF13676.1  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0   8.2e-12   5.6e-08      46      95 ..       9      68 ..       1      74 [. 0.80

  Alignments for each domain:
  == domain 1    score: 32.7 bits;  conditional E-value: 8.2e-12
    PF13676.1 46 alrradvvlvllspaylasdwvrkEleaakelgkpvipvlledc..........elpgll 95
                 +l+ra+++l++l+pa+++s+++ +E++aa+++g +++p+l+e +          ++++++
  MMETSP1325-20131115|12702_1  9 KLERAEIMLAVLTPAFYTSENCLNEIAAARSHGLTILPLLFELTddgeapwsrgAWQAVF 68
                 599*************************************77554455544444555555 PP

>> PF01582.15  TIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   5.8e-06      0.04      51     119 ..       9      71 ..       1      91 [. 0.70

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.8e-06
                  HHTTEEEEEEEESHHHHHHTHHHHHTTTCCCT--------EEEEESS---TTTS-T-HHHHHHHHCT-S CS
   PF01582.15  51 aIkkSrraivilssnyaesewcldElveavkealeqgnkkviliifykvkesdvrpkqsgkfgkaflkt 119
                  + ++ ++++ +l++ ++ se cl+E  +a  +       + il+ + ++ ++ + p  +g    +f+++
  MMETSP1325-20131115|12702_1   9 KLERAEIMLAVLTPAFYTSENCLNEIAAARSHG------LTILPLLFELTDDGEAPWSRGAWQAVFEQL 71 
                  6788999******************99876554......447777777777777666666666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 566.83
//
Query:       MMETSP1325-20131115|12711_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 418.27
//
Query:       MMETSP1325-20131115|12712_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      153  (0.0111908); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 492.84
//
Query:       MMETSP1325-20131115|12704_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-51  174.0   0.1    2.3e-51  173.6   0.1    1.1  1  PF00227.21 Proteasome subunit


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.6   0.1   1.7e-55   2.3e-51       2     189 ..      82     262 ..      81     263 .. 0.95

  Alignments for each domain:
  == domain 1    score: 173.6 bits;  conditional E-value: 1.7e-55
                  HC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTT.CEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEE CS
   PF00227.21   2 kkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfg.vslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknvevav 189
                  +kGtt++++k+++g+++a+d+r+t+g ++ +++tv+K+++i+++++ ++aG aaD+  + + + ++++ly+lr++++isv      +a++l+a+t +++r++ + +++++ g+d++g pqly++d +++ +  +  +++Gsgs++a+++l+++ ++dlt++ea++l ++a+++a++rd++sg+ ++v++
  MMETSP1325-20131115|12704_1  82 AKGTTTLAFKFNEGIIIAVDSRSTMGPYI-ASQTVKKVIEINPYLLGTMAGGAADCAFWERNLGMQCRLYELRNKERISVA-----AASKLLANTMYQYRGYGLsMGTMVTGWDKTG-PQLYYCDNDATRLHGD-LFSVGSGSTYAYGVLDSHHRPDLTVDEAIDLGKRAIYHATHRDAYSGGICNVYH 262
                  68***************************.7777***********************************************.....99999999999988766449********777.***************6.************************************************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.54
# Mc/sec: 1349.06
//
Query:       MMETSP1325-20131115|12703_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      284  (0.0207724); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 1060.52
//
Query:       MMETSP1325-20131115|12717_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       627  (0.0458602); expected 273.4 (0.02)
Passed bias filter:                      476  (0.0348157); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 640.77
//
Query:       MMETSP1325-20131115|12716_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 248.51
//
Query:       MMETSP1325-20131115|12725_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 217.45
//
Query:       MMETSP1325-20131115|12728_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 642.43
//
Query:       MMETSP1325-20131115|12730_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      261  (0.0190901); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 661.60
//
Query:       MMETSP1325-20131115|12739_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 314.52
//
Query:       MMETSP1325-20131115|12741_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      179  (0.0130925); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 530.96
//
Query:       MMETSP1325-20131115|12748_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-16   57.7   0.1    1.1e-15   57.6   0.1    1.0  1  PF00481.16 Protein phosphatase 2C
     0.0014   18.2   0.5     0.0016   18.0   0.4    1.1  1  PF07228.7  Stage II sporulation protein E (SpoIIE)
  ------ inclusion threshold ------
      0.086   12.1   0.1        0.1   11.9   0.0    1.1  1  PF13672.1  Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.1   2.3e-19   1.1e-15     170     251 ..       1      74 [.       1      79 [. 0.92

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 2.3e-19
                  SBSB----HHHC---ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHHHHHHHHHHHHHHHTHHHHHTS-SSHHHHHH CS
   PF00481.16 170 avsRalGdfelkpkekeqlvsaePdvtsvkideedefliLasDGlwdvlsdqeavdlvrselskkkspmeaaeelvdeaiar 251
                  a+sR+lGd    +    + vs+e + t+++ +e+d++liLasDGlw+ ++dqe+vd+++ + +     +++ +elv+ea +r
  MMETSP1325-20131115|12748_1   1 AMSRSLGDMVAHD----AGVSSELEFTEFDVTEDDKCLILASDGLWEFMTDQEVVDMAHGFDD----CTTMVNELVQEANNR 74 
                  79**********9....79***************************************99955....688999999988765 PP

>> PF07228.7  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.4   3.5e-07    0.0016     107     189 ..      15      89 ..       7      90 .] 0.79

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 3.5e-07
                  --.--.----EEE------EEEEE-----S--HHHHHH....HHHHHT----------HHHHHHHHHHH..HCT----S-EEEEE CS
    PF07228.7 107 GilpeadyeeaelqlepgdllllyTDGvtEardpdgelfgkerllallaeaegesleelldalveelle..lgsgeleDDitllv 189
                  G+ +e++++e+ ++ e +  l+l++DG+ E +++++      + ++ +++      + ++++lv+e+ +  + ++++ DD+t++v
  MMETSP1325-20131115|12748_1  15 GVSSELEFTEFDVT-EDDKCLILASDGLWEFMTDQEVV----DMAHGFDD-----CTTMVNELVQEANNrwMREEQVIDDTTVIV 89 
                  66666666666655.55778**********99777776....77777784.....5789999999999999999*********98 PP

>> PF13672.1  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.2e-05       0.1     152     197 ..      16      67 ..       8      82 .. 0.65

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.2e-05
    PF13672.1 152 aeeelrvrrlk.lepvdalllmTDGlsnslrdee.....afapllkelleel 197
                  +++el++ +++ +e+ ++l+l +DGl++ ++d+e     + ++  +++++el
  MMETSP1325-20131115|12748_1  16 VSSELEFTEFDvTEDDKCLILASDGLWEFMTDQEvvdmaHGFDDCTTMVNEL 67 
                  5677888888877899***********6666655553333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|12736_1  [L=257]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-24   85.3   3.0    4.1e-24   84.5   2.1    1.3  1  PF13864.1 Calmodulin-binding
  ------ inclusion threshold ------
       0.21   10.4   2.0       0.28   10.0   1.4    1.1  1  PF10037.4 Mitochondrial 28S ribosomal protein S27


Domain annotation for each model (and alignments):
>> PF13864.1  Calmodulin-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.5   2.1     6e-28   4.1e-24       1      96 [.     146     250 ..     146     251 .. 0.90

  Alignments for each domain:
  == domain 1    score: 84.5 bits;  conditional E-value: 6e-28
    PF13864.1   1 GkvPkYLkkrkeeiaeekeeleaqeeeqe.ap.......kgvrllseeErlellegLkkkweelnkelqklplv.ldtlskkrrkeelEkelaeiEedikklskk 96 
                  GkvP+YL+++keei++e+e+++a+  e   a+       +++ ++s +Er el++ Lk+kw+ +n+++qk+  v ldt++k +rke +Ekel +iE+di+ l+++
  MMETSP1325-20131115|12736_1 146 GKVPEYLSQVKEEIRRENEMIDAYVMEMGrAQgaveepgEELIEMSAAERSELVRALKRKWDAVNAKYQKMACVeLDTVGKVKRKEGMEKELVQIEADIERLERP 250
                  9******************999998544433344555569999****************************9999***************************996 PP

>> PF10037.4  Mitochondrial 28S ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.4     4e-05      0.28     297     381 ..     155     243 ..     147     248 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 4e-05
    PF10037.4 297 deeslkklqeaidkvess.....elleellleeveksklkeeellaeyaesfqelseklqalekvelesllsvkerleaiekedleleee 381
                   +e++  + e+id    +      ++ee+ +e +e s ++  el++     + +++ k q+++ vel+ +    +r+e +eke++++e+ 
  MMETSP1325-20131115|12736_1 155 VKEEIRRENEMIDAYVMEmgraqGAVEEPGEELIEMSAAERSELVRALKRKWDAVNAKYQKMACVELDTVG-KVKRKEGMEKELVQIEAD 243
                  5677888888888876666778899*************99999****************************.88999*******999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       580  (0.0424225); expected 273.4 (0.02)
Passed bias filter:                      485  (0.035474); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.33s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 1310.35
//
Query:       MMETSP1325-20131115|12749_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 259.20
//
Query:       MMETSP1325-20131115|12738_1  [L=335]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.9e-10   38.7   0.0    1.4e-09   38.0   0.0    1.3  1  PF02833.9 DHHA2 domain


Domain annotation for each model (and alignments):
>> PF02833.9  DHHA2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0     1e-13   1.4e-09      13     126 ..     170     306 ..     155     307 .. 0.89

  Alignments for each domain:
  == domain 1    score: 38.0 bits;  conditional E-value: 1e-13
    PF02833.9  13 glsleellrkDyKqFefgglkvgisqvevvdleellsrkdeleaalekfleergldllllmvt..dilkerslllvagaeaelvekafkvkledeeleLe.......................gvvsrkKqvvPlLkea 126
                  +ls  e+lr Dy +   +g+++gis v  + + ++ ++   l +a  +f+ e++ld l++m    +   +r++l+ + + ++l e  + ++     ++++                       +v  ++Kqv+Pl+ ea
  MMETSP1325-20131115|12738_1 170 SLSSLEMLRYDYQEDASNGRTFGISAV-LLPFWDVMEK-PMLYKASCEFMSEKKLDTLIVMAYsfEPRMSRQILFLSDNYEKLKELTQAFARVGGHAQMDlvyadmdveeclgtknceafqqfNVAFSRKQVLPLVVEA 306
                  678889*********************.*******998.888888889*************99999999999999999888888888888888888888888*********************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      339  (0.0247952); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.39s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 1486.63
//
Query:       MMETSP1325-20131115|12742_1  [L=407]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.68
# Mc/sec: 1434.29
//
Query:       MMETSP1325-20131115|12755_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|12756_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.076   12.5   0.3        0.1   12.1   0.2    1.1  1  PF12042.3 Tubuliform egg casing silk strands structural domain
       0.12   11.8   3.6       0.21   11.1   2.5    1.4  1  PF07344.6 Amastin surface glycoprotein


Domain annotation for each model (and alignments):
>> PF12042.3  Tubuliform egg casing silk strands structural domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   1.5e-05       0.1      58     111 ..      36      86 ..      29      95 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.5e-05
                  HHH---.--HHHH---HHHH---------HHHHHHHHHHH---HHHH-----TT CS
    PF12042.3  58 arsLGldsnasalasavaqavssvgvGAsasaYAnAianAigqvLanqGvlnas 111
                     +Gl  n+++  + va+   + ++ As s+ A+A+ +Ai+q+L+ +G +  s
  MMETSP1325-20131115|12756_1  36 IDIYGL--NTTNTTADVAEKCENCKA-ASGSSIATAVFGAITQLLQINGDVGRS 86 
                  567999..88888999*********9.9*****************999966655 PP

>> PF07344.6  Amastin surface glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.5     3e-05      0.21      29     153 ..      24     150 ..       5     151 .. 0.66

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3e-05
    PF07344.6  29 ciTlWglkedcdsvs.ydlrtselwkeCprrrqrfraaeafsIisilvllaalllgvllllccsslkwvclllnivsvvtllivwalmvavyy..krfCgalksttakygaGFgLlvvawlldlinii 153
                   i +W    dc+s++ y l+t+++ ++ ++  ++ +aa+  sI + ++ + + ll +   ++ s +   +     v+v+  l     + a       +C ++  +t++ g+GF+++vva+l++ ++++
  MMETSP1325-20131115|12756_1  24 TIKFWS-GIDCSSIDiYGLNTTNTTADVAEKCENCKAASGSSIATAVFGAITQLLQINGDVGRSTVAGDMNCAKTVGVLSGLWGLGSTLASLLifYYNCFETDLGTMRAGVGFIMIVVATLMKALDVL 150
                  555665.4566665436667777777777777778888888888888888888877775555555554444444444444444444444333333567988888999**************9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       517  (0.0378145); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 953.75
//
Query:       MMETSP1325-20131115|12760_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|12766_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.098   12.1   0.0       0.14   11.6   0.0    1.1  1  PF04528.8 Adenovirus early E4 34 kDa protein conserved region


Domain annotation for each model (and alignments):
>> PF04528.8  Adenovirus early E4 34 kDa protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     1e-05      0.14      13      39 ..      49      75 ..      47      79 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1e-05
    PF04528.8 13 afnkrflwYrevvnksspkeilYvGSv 39
                 +fn++  +Y+++v  + p +++Yv S 
  MMETSP1325-20131115|12766_1 49 YFNTKTQQYYQHVPDQTPPYVAYVASS 75
                 79**********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       239  (0.017481); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 423.19
//
Query:       MMETSP1325-20131115|12767_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.35s 00:00:00.62 Elapsed: 00:00:00.48
# Mc/sec: 184.72
//
Query:       MMETSP1325-20131115|12761_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-56  189.3   0.0      5e-56  188.8   0.0    1.2  1  PF00227.21 Proteasome subunit
    4.4e-14   51.3   0.2    8.8e-14   50.4   0.1    1.5  1  PF10584.4  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.8   0.0   7.4e-60     5e-56       1     190 []      27     211 ..      27     211 .. 0.98

  Alignments for each domain:
  == domain 1    score: 188.8 bits;  conditional E-value: 7.4e-60
                  HHC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE.-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEEEE CS
   PF00227.21   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrsgrrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiG.sgseaaktlleklykedltleeavelavkalkealerdklsgknvevavi 190
                  v+k+t+vv++kg d vv++++++a   +kl++++t++Ki k+d h+ +afaGl+aDar+l+e+ar e+q+yrl+ ++ +s+e++++ +a+  q+ytqr+g+rpfgvs ++ag+  +g+pq+yqidpsG+++++k a aiG  + + +k++lek++ e lt+ e ++l vkal e+++   +  kn+e++vi
  MMETSP1325-20131115|12761_1  27 VRKATAVVAVKGADTVVIGVERKAI--AKLQDPRTIRKIVKLDAHVTLAFAGLTADARVLIEKARTECQSYRLTCEDAPSLEYIARFIARTQQRYTQRGGVRPFGVSSILAGFGADGQPQIYQIDPSGNYFAWK-ANAIGgRNFKPMKEFLEKEWVEGLTEAESLKLTVKALLEVVD---SGTKNMEIVVI 211
                  6799*********************..**********************************************************************************************************8.******************************************...77888888776 PP

>> PF10584.4  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.1   1.3e-17   8.8e-14       1      23 []       4      26 ..       4      26 .. 0.99

  Alignments for each domain:
  == domain 1    score: 50.4 bits;  conditional E-value: 1.3e-17
                 T---TT--------HHHHHHHHH CS
    PF10584.4  1 YDrslTtFSPdGRLfQVEYAlkA 23
                 YDr++T+FSPdG+LfQ++YA++A
  MMETSP1325-20131115|12761_1  4 YDRAITVFSPDGKLFQIDYAFEA 26
                 **********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      351  (0.0256729); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1198.18
//
Query:       MMETSP1325-20131115|12770_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       711  (0.0520041); expected 273.4 (0.02)
Passed bias filter:                      520  (0.0380339); expected 273.4 (0.02)
Passed Vit filter:                        38  (0.0027794); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.39s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1106.68
//
Query:       MMETSP1325-20131115|12773_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-08   32.5   0.1      1e-07   32.4   0.1    1.0  1  PF02771.11 Acyl-CoA dehydrogenase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF02771.11  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.1   7.3e-12     1e-07      35      99 ..      13      76 .]       3      76 .] 0.77

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 7.3e-12
                 HHHHHHHH---TSTTS-TT-------HHHHHHHHHHHHHH--TTCH.HHHHHHHCCHHHHHH---H CS
   PF02771.11 35 elwrklaelGllgitvpeeyGGagldalelalvleelaradaglav.algvhsslvapailrfGte 99
                 e+++   e G+ g+++p +yGG+g+ ++++al+  e+ +a   + + ++g+ s  ++++i+++ t+
  MMETSP1325-20131115|12773_1 13 EAYDIYVESGWQGLSFPPQYGGQGM-PMSMALIQSEMIAAANWTWLmFPGL-SKGAINTIYAHCTD 76
                 456777899***************8.8999999999988766555635555.55555899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|12774_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       893  (0.065316); expected 273.4 (0.02)
Passed bias filter:                      503  (0.0367905); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.38s 00:00:01.01 Elapsed: 00:00:00.54
# Mc/sec: 1291.37
//
Query:       MMETSP1325-20131115|12777_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-39  134.1  11.1    6.2e-16   58.1   0.2    4.0  4  PF13499.1  EF-hand domain pair
    2.1e-37  123.4  21.4      5e-08   31.5   0.4    6.4  6  PF00036.27 EF hand
    3.8e-33  110.2   5.2    2.2e-05   23.8   0.0    6.4  6  PF13405.1  EF-hand domain
    4.5e-28   96.5  21.8    1.4e-10   40.5   0.5    6.0  6  PF13833.1  EF-hand domain pair
    1.4e-24   84.1  12.7    0.00025   20.0   0.1    6.3  6  PF13202.1  EF hand
    4.1e-10   39.1   4.9      0.051   13.2   0.0    4.1  4  PF12763.2  Cytoskeletal-regulatory complex EF hand
    1.1e-07   31.7   0.3        0.4   10.6   0.0    3.3  3  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
      0.002   17.9   1.5       0.15   11.9   0.0    3.2  3  PF08726.5  Ca2+ insensitive EF hand


Domain annotation for each model (and alignments):
>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.1   0.2   3.6e-19   6.2e-16       2      65 ..      72     131 ..      71     132 .. 0.96
   2 !   15.7   0.1   6.4e-06     0.011      35      65 ..     188     217 ..     173     218 .. 0.73
   3 !   13.5   0.1   3.1e-05     0.052       4      30 ..     228     254 ..     225     266 .. 0.79
   4 !   52.2   0.1   2.6e-17   4.4e-14       2      63 ..     262     323 ..     261     325 .. 0.96

  Alignments for each domain:
  == domain 1    score: 58.1 bits;  conditional E-value: 3.6e-19
    PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEflqa 65 
                  + eaFk++D d+++++  +e++++l ++g+  +deev+e+    ++++D++gdG++ feEf+++
  MMETSP1325-20131115|12777_1  72 IAEAFKAFDLDNNNFVGAAEIRHVLINIGETVTDEEVDEM----IRMVDTDGDGQVGFEEFYEM 131
                  6799************************************....******************98 PP

  == domain 2    score: 15.7 bits;  conditional E-value: 6.4e-06
    PF13499.1  35 deevrevldyifkelDkngdGvlsfeEflqa 65 
                  +e++++  ++ f+  Dk+++G ++++Ef+++
  MMETSP1325-20131115|12777_1 188 PESIKKA-YKRFQATDKDKSGMIDYTEFCEI 217
                  5555553.66699999999999999999987 PP

  == domain 3    score: 13.5 bits;  conditional E-value: 3.1e-05
    PF13499.1   4 eaFkllDkdgdgyldkeeLlrllkhlg 30 
                  ++F+l+D d++g++d+ e++ +l ++ 
  MMETSP1325-20131115|12777_1 228 KVFQLFDYDKSGQIDVREFMIALSNFT 254
                  479999999999999999999888775 PP

  == domain 4    score: 52.2 bits;  conditional E-value: 2.6e-17
    PF13499.1   2 lkeaFkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63 
                  lk  F  +D dg+g ++k+eL+r+lk+ +    d+ev + +d i+++ D+ngdGv++f+Ef+
  MMETSP1325-20131115|12777_1 262 LKFSFMIFDEDGNGVITKAELTRILKANHMATQDSEVARKADTIMQQSDENGDGVVTFDEFV 323
                  77789************************9999****************************7 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.3e-06    0.0023       1      27 [.      71      97 ..      71      99 .. 0.92
   2 !   31.5   0.4   2.9e-11     5e-08       1      27 [.     107     133 ..     107     135 .. 0.94
   3 !   22.1   0.0   3.1e-08   5.3e-05       5      27 ..     197     219 ..     193     220 .. 0.90
   4 !   23.1   0.2   1.5e-08   2.6e-05       4      28 ..     228     252 ..     227     253 .. 0.92
   5 !   21.8   0.1   3.8e-08   6.5e-05       2      28 ..     262     288 ..     261     289 .. 0.91
   6 !   20.0   0.1   1.4e-07   0.00024       3      27 ..     303     327 ..     301     329 .. 0.87

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHCTTTSSEBEHHHHHHHHH CS
   PF00036.27  1 elkeaFkefDkDgdGkIsfeEfkealk 27
                 e+ eaFk fD D++ ++   E +++l 
  MMETSP1325-20131115|12777_1 71 EIAEAFKAFDLDNNNFVGAAEIRHVLI 97
                 789********************9986 PP

  == domain 2    score: 31.5 bits;  conditional E-value: 2.9e-11
                  HHHHHHHHHCTTTSSEBEHHHHHHHHH CS
   PF00036.27   1 elkeaFkefDkDgdGkIsfeEfkealk 27 
                  e++e+++++D+DgdG++ feEf e+++
  MMETSP1325-20131115|12777_1 107 EVDEMIRMVDTDGDGQVGFEEFYEMVT 133
                  79**********************986 PP

  == domain 3    score: 22.1 bits;  conditional E-value: 3.1e-08
                  HHHHHCTTTSSEBEHHHHHHHHH CS
   PF00036.27   5 aFkefDkDgdGkIsfeEfkealk 27 
                   F+  DkD++G I++ Ef+e+l+
  MMETSP1325-20131115|12777_1 197 RFQATDKDKSGMIDYTEFCEILQ 219
                  69999***************985 PP

  == domain 4    score: 23.1 bits;  conditional E-value: 1.5e-08
                  HHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27   4 eaFkefDkDgdGkIsfeEfkealkk 28 
                  ++F++fD D++G+I++ Ef+ al++
  MMETSP1325-20131115|12777_1 228 KVFQLFDYDKSGQIDVREFMIALSN 252
                  89******************99976 PP

  == domain 5    score: 21.8 bits;  conditional E-value: 3.8e-08
                  HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                  lk  F +fD Dg+G I++ E+ ++lk+
  MMETSP1325-20131115|12777_1 262 LKFSFMIFDEDGNGVITKAELTRILKA 288
                  6788********************985 PP

  == domain 6    score: 20.0 bits;  conditional E-value: 1.4e-07
                  HHHHHHHCTTTSSEBEHHHHHHHHH CS
   PF00036.27   3 keaFkefDkDgdGkIsfeEfkealk 27 
                  + +++  D +gdG ++f+Ef+ + k
  MMETSP1325-20131115|12777_1 303 DTIMQQSDENGDGVVTFDEFVVVSK 327
                  7799****************98766 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   3.7e-07   0.00064       1      27 [.      71      97 ..      71     100 .. 0.90
   2 !   14.3   0.0   1.5e-05     0.025       5      27 ..     111     133 ..     107     142 .. 0.85
   3 !   15.1   0.0   7.9e-06     0.014       3      27 ..     195     219 ..     193     223 .. 0.90
   4 !   23.4   0.1   1.7e-08   2.9e-05       4      27 ..     228     251 ..     227     257 .. 0.92
   5 !   23.8   0.0   1.3e-08   2.2e-05       3      27 ..     263     287 ..     261     292 .. 0.89
   6 !   10.6   0.0   0.00022      0.38      10      25 ..     310     325 ..     305     338 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 3.7e-07
                 HHH---GCC-------B---HHHHHHH CS
    PF13405.1  1 elreaFklfDkdgdGkidaeELrdaLr 27
                 e+ eaFk+fD d+++++ a+E+r++L 
  MMETSP1325-20131115|12777_1 71 EIAEAFKAFDLDNNNFVGAAEIRHVLI 97
                 5779********************995 PP

  == domain 2    score: 14.3 bits;  conditional E-value: 1.5e-05
                  --GCC-------B---HHHHHHH CS
    PF13405.1   5 aFklfDkdgdGkidaeELrdaLr 27 
                    ++ D+dgdG++ +eE+  + +
  MMETSP1325-20131115|12777_1 111 MIRMVDTDGDGQVGFEEFYEMVT 133
                  56899*************88765 PP

  == domain 3    score: 15.1 bits;  conditional E-value: 7.9e-06
                  H---GCC-------B---HHHHHHH CS
    PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                  ++ F++ Dkd++G id  E+  +L+
  MMETSP1325-20131115|12777_1 195 YKRFQATDKDKSGMIDYTEFCEILQ 219
                  578999****************997 PP

  == domain 4    score: 23.4 bits;  conditional E-value: 1.7e-08
                  ---GCC-------B---HHHHHHH CS
    PF13405.1   4 eaFklfDkdgdGkidaeELrdaLr 27 
                  ++F+lfD+d++G+id  E++ aL+
  MMETSP1325-20131115|12777_1 228 KVFQLFDYDKSGQIDVREFMIALS 251
                  79*******************998 PP

  == domain 5    score: 23.8 bits;  conditional E-value: 1.3e-08
                  H---GCC-------B---HHHHHHH CS
    PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                  +  F++fD dg+G i+++EL ++L+
  MMETSP1325-20131115|12777_1 263 KFSFMIFDEDGNGVITKAELTRILK 287
                  666*********************9 PP

  == domain 6    score: 10.6 bits;  conditional E-value: 0.00022
                  -------B---HHHHH CS
    PF13405.1  10 DkdgdGkidaeELrda 25 
                  D +gdG ++++E++ +
  MMETSP1325-20131115|12777_1 310 DENGDGVVTFDEFVVV 325
                  99***********876 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.1   6.6e-05      0.11      22      43 ..      67      88 ..      59      93 .. 0.85
   2 !   40.5   0.5   8.1e-14   1.4e-10       9      52 ..      91     133 ..      86     135 .. 0.83
   3 !   12.9   0.0   3.2e-05     0.054      31      52 ..     198     219 ..     198     220 .. 0.86
   4 !    8.5   0.1    0.0008       1.4      30      50 ..     229     249 ..     227     253 .. 0.89
   5 !   10.1   0.0   0.00024      0.41      31      48 ..     266     283 ..     257     288 .. 0.75
   6 !   35.5   0.2   2.8e-12   4.8e-09       2      52 ..     274     327 ..     273     329 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 6.6e-05
    PF13833.1 22 lseeevdilfrefDtdgdGkis 43
                 +++ee+ + f++fD+d+++ ++
  MMETSP1325-20131115|12777_1 67 FTDEEIAEAFKAFDLDNNNFVG 88
                 9****************99776 PP

  == domain 2    score: 40.5 bits;  conditional E-value: 8.1e-14
    PF13833.1   9 eLkral.allglkglseeevdilfrefDtdgdGkisfeEFcvlle 52 
                  e ++ l + +g   +++eevd+++r++DtdgdG ++feEF+++++
  MMETSP1325-20131115|12777_1  91 EIRHVLiN-IGET-VTDEEVDEMIRMVDTDGDGQVGFEEFYEMVT 133
                  55665533.3777.****************************986 PP

  == domain 3    score: 12.9 bits;  conditional E-value: 3.2e-05
    PF13833.1  31 frefDtdgdGkisfeEFcvlle 52 
                  f + D d++G+i++ EFc+ l+
  MMETSP1325-20131115|12777_1 198 FQATDKDKSGMIDYTEFCEILQ 219
                  56679*************8776 PP

  == domain 4    score: 8.5 bits;  conditional E-value: 0.0008
    PF13833.1  30 lfrefDtdgdGkisfeEFcvl 50 
                  +f +fD d++G i+  EF+ +
  MMETSP1325-20131115|12777_1 229 VFQLFDYDKSGQIDVREFMIA 249
                  5999**************965 PP

  == domain 5    score: 10.1 bits;  conditional E-value: 0.00024
    PF13833.1  31 frefDtdgdGkisfeEFc 48 
                  f  fD dg+G i+++E  
  MMETSP1325-20131115|12777_1 266 FMIFDEDGNGVITKAELT 283
                  788999999999988865 PP

  == domain 6    score: 35.5 bits;  conditional E-value: 2.8e-12
    PF13833.1   2 kGlItreeLkralallglkglseeev....dilfrefDtdgdGkisfeEFcvlle 52 
                  +G+It++eL r+l++ ++  + ++ev    d+++   D +gdG ++f+EF+v+ +
  MMETSP1325-20131115|12777_1 274 NGVITKAELTRILKANHMA-TQDSEVarkaDTIMQQSDENGDGVVTFDEFVVVSK 327
                  8************777999.66665444449********************9865 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00044      0.76       3      24 ..      74      95 ..      72      96 .. 0.84
   2 !   20.0   0.1   1.5e-07   0.00025       4      25 .]     111     132 ..     108     132 .. 0.88
   3 !   11.5   0.0   7.6e-05      0.13       4      21 ..     197     214 ..     195     218 .. 0.91
   4 !   19.6   0.1     2e-07   0.00034       2      22 ..     227     247 ..     227     251 .. 0.91
   5 !   15.2   0.1   5.1e-06    0.0087       5      24 ..     266     285 ..     262     287 .. 0.87
   6 !   12.4   0.0   3.9e-05     0.066       6      21 ..     307     322 ..     302     328 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.00044
                 HHHHHH--S----B-HHHHHHH CS
    PF13202.1  3 dtFrafDlNgDGkIsreELkrl 24
                 ++F+afDl++  ++ + E + +
  MMETSP1325-20131115|12777_1 74 EAFKAFDLDNNNFVGAAEIRHV 95
                 46*********99999998875 PP

  == domain 2    score: 20.0 bits;  conditional E-value: 1.5e-07
                  HHHHH--S----B-HHHHHHHH CS
    PF13202.1   4 tFrafDlNgDGkIsreELkrlv 25 
                  + r +D++gDG++ +eE++++v
  MMETSP1325-20131115|12777_1 111 MIRMVDTDGDGQVGFEEFYEMV 132
                  6789***************986 PP

  == domain 3    score: 11.5 bits;  conditional E-value: 7.6e-05
                  HHHHH--S----B-HHHH CS
    PF13202.1   4 tFrafDlNgDGkIsreEL 21 
                   F+a D++++G I+  E+
  MMETSP1325-20131115|12777_1 197 RFQATDKDKSGMIDYTEF 214
                  49*************998 PP

  == domain 4    score: 19.6 bits;  conditional E-value: 2e-07
                  HHHHHHH--S----B-HHHHH CS
    PF13202.1   2 kdtFrafDlNgDGkIsreELk 22 
                  +++F+ fD +++G+I+  E++
  MMETSP1325-20131115|12777_1 227 EKVFQLFDYDKSGQIDVREFM 247
                  579****************95 PP

  == domain 5    score: 15.2 bits;  conditional E-value: 5.1e-06
                  HHHH--S----B-HHHHHHH CS
    PF13202.1   5 FrafDlNgDGkIsreELkrl 24 
                  F  fD +g G I++ EL r+
  MMETSP1325-20131115|12777_1 266 FMIFDEDGNGVITKAELTRI 285
                  999**************984 PP

  == domain 6    score: 12.4 bits;  conditional E-value: 3.9e-05
                  HHH--S----B-HHHH CS
    PF13202.1   6 rafDlNgDGkIsreEL 21 
                  ++ D NgDG ++++E+
  MMETSP1325-20131115|12777_1 307 QQSDENGDGVVTFDEF 322
                  55599**********9 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0     3e-05     0.051      14      66 ..      74     129 ..      65     133 .. 0.78
   2 !    6.2   0.0    0.0045       7.7      47      70 ..     196     219 ..     171     222 .. 0.76
   3 !    9.8   0.0   0.00033      0.56      44      69 ..     225     250 ..     219     253 .. 0.90
   4 !    9.4   0.0   0.00044      0.76      22      70 ..     273     327 ..     260     336 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 3e-05
    PF12763.2  14 eifsglk.pednkltgdkvapvlkn..skleedklekiwdladidedgkldfeefc 66 
                  e f++ + +++n +   ++  vl n    +++++++++  + d d dg++ feef 
  MMETSP1325-20131115|12777_1  74 EAFKAFDlDNNNFVGAAEIRHVLINigETVTDEEVDEMIRMVDTDGDGQVGFEEFY 129
                  44555551456778888999999984457999**********************95 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0045
    PF12763.2  47 kiwdladidedgkldfeefciamr 70 
                  k ++ +d d+ g++d+ efc +++
  MMETSP1325-20131115|12777_1 196 KRFQATDKDKSGMIDYTEFCEILQ 219
                  34567899************8766 PP

  == domain 3    score: 9.8 bits;  conditional E-value: 0.00033
    PF12763.2  44 klekiwdladidedgkldfeefciam 69 
                  + ek+++l d d+ g++d  ef+ia+
  MMETSP1325-20131115|12777_1 225 QGEKVFQLFDYDKSGQIDVREFMIAL 250
                  6689********************97 PP

  == domain 4    score: 9.4 bits;  conditional E-value: 0.00044
    PF12763.2  22 ednkltgdkvapvlknskleed......klekiwdladidedgkldfeefciamr 70 
                   +  +t+ +++ +lk  ++ ++      k + i + +d + dg + f+ef+++ +
  MMETSP1325-20131115|12777_1 273 GNGVITKAELTRILKANHMATQdsevarKADTIMQQSDENGDGVVTFDEFVVVSK 327
                  56778888888888887775431222224567999****************9865 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00023       0.4      53     111 ..      69     129 ..      57     131 .. 0.87
   2 !    7.7   0.0    0.0018       3.1      36     111 ..     175     247 ..     164     249 .. 0.76
   3 !    9.9   0.0   0.00039      0.67      53     111 ..     259     323 ..     252     325 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00023
    PF10591.4  53 keaveWkFnqlDtnkdkvlsksElaplrapl..vklehCikeffksCDadkdkkisleEWc 111
                  +e++   F+ +D ++++++  +E++++  ++     ++ ++e++++ D+d d+++ +eE+ 
  MMETSP1325-20131115|12777_1  69 DEEIAEAFKAFDLDNNNFVGAAEIRHVLINIgeTVTDEEVDEMIRMVDTDGDGQVGFEEFY 129
                  6777889******************999888775667779*******************96 PP

  == domain 2    score: 7.7 bits;  conditional E-value: 0.0018
    PF10591.4  36 hseelekeaekknskeckeaveWkFnqlDtnkdkvlsksElaplraplvklehCikeffksCDadkdkkisleEWc 111
                  +  ++ +++++ + +++k ++  +F+  D++k ++++ +E+ ++ +         ++ f+  D dk ++i+++E++
  MMETSP1325-20131115|12777_1 175 TALDEFARDNNLKPESIK-KAYKRFQATDKDKSGMIDYTEFCEILQV--DPSPQGEKVFQLFDYDKSGQIDVREFM 247
                  344455555555555554.45558*******************9996..899999999****************97 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00039
    PF10591.4  53 keaveWkFnqlDtnkdkvlsksElaplrapl......vklehCikeffksCDadkdkkisleEWc 111
                  ++++++ F  +D + ++v++k+El+ + +         ++ +  ++ +++ D + d+ ++++E+ 
  MMETSP1325-20131115|12777_1 259 DDKLKFSFMIFDEDGNGVITKAELTRILKANhmatqdSEVARKADTIMQQSDENGDGVVTFDEFV 323
                  57899*******************997544323443344556678999999*********99996 PP

>> PF08726.5  Ca2+ insensitive EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   8.6e-05      0.15       4      52 ..      68     120 ..      65     133 .. 0.78
   2 ?    2.4   0.0     0.079   1.3e+02      32      67 ..     187     218 ..     183     220 .. 0.65
   3 ?    0.5   0.0      0.31   5.4e+02       7      35 ..     261     290 ..     258     313 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.6e-05
    PF08726.5   4 saeqveeaFral.aegKpYvTeedLraallp..eqa.eyllerMpeysgpegd 52 
                  + e++ eaF+a   ++ ++v + ++r+ l++  e + +  +++M ++ +++gd
  MMETSP1325-20131115|12777_1  68 TDEEIAEAFKAFdLDNNNFVGAAEIRHVLINigETVtDEEVDEMIRMVDTDGD 120
                  89**********88889**********99863355667777777777766655 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.079
    PF08726.5  32 lpeqaeyllerMpeysgpegdetegayDYesFlekl 67 
                   pe +++  +r + +     + ++g  DY++F+e l
  MMETSP1325-20131115|12777_1 187 KPESIKKAYKRFQATD----KDKSGMIDYTEFCEIL 218
                  5555555555555555....3457889*****9865 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.31
    PF08726.5   7 qveeaFral.aegKpYvTeedLraallpeq 35 
                   ++ +F +  ++g   +T+ +L + l ++ 
  MMETSP1325-20131115|12777_1 261 KLKFSFMIFdEDGNGVITKAELTRILKANH 290
                  5677899998888899*****998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       388  (0.0283792); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.56
# Mc/sec: 1437.81
//
Query:       MMETSP1325-20131115|12782_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 444.32
//
Query:       MMETSP1325-20131115|12779_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-40  137.7   0.5    3.1e-40  137.5   0.4    1.0  1  PF00080.15 Copper/zinc superoxide dismutase (SODC)


Domain annotation for each model (and alignments):
>> PF00080.15  Copper/zinc superoxide dismutase (SODC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.5   0.4   2.3e-44   3.1e-40       9     142 .]      16     154 ..       4     154 .. 0.95

  Alignments for each domain:
  == domain 1    score: 137.5 bits;  conditional E-value: 2.3e-44
                  ---EEEEEEEEESSTTS-EEEEEEEB------B--EEE-----.SS--TT---B-----------GGCS--------B-------BEEEEECSS-BHH---CHH--EEEEE-----T......HHCC------EEEE-EE CS
   PF00080.15   9 dgkvkGtvtftqksgesgvevtvelkgltpgkhgfhiHekgdcesngcksagghynpekkkhggpsdekrhaGDlgnievdadGeakleitddrlslkgeesiiGrslvihageddl......tsqptGnaGarlaCgvI 142
                  ++ ++G+  f+q+++ + ++++++++gltpg+h++hiH++gd+ s+g +s+gg +np +k+hg+p+de+r +GDlgn+evd +G+++++i d+ ++l g++siiGrs+v+ +geddl       s+ +Gn+Garla g I
  MMETSP1325-20131115|12779_1  16 GEGIRGELSFEQAQEDAPTRIDGTVEGLTPGVHAIHIHTFGDL-SQGMSSTGGIFNPFGKNHGAPDDEERMVGDLGNLEVDPQGRCTVHIEDRLVKLIGPHSIIGRSVVVKQGEDDLgrggheLSLVNGNSGARLAAGCI 154
                  6679**********7766*************************.*******************************************************************************9*************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 793.79
//
Query:       MMETSP1325-20131115|12785_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.8   0.0        0.1   12.8   0.0    1.0  1  PF12796.2 Ankyrin repeats (3 copies)


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   7.3e-06       0.1      20      46 ..       2      31 ..       1      36 [] 0.56

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 7.3e-06
    PF12796.2 20 gadvdl...getpLhlAaeagnleivklLl 46
                 ga+v++   g+ pL +A ++g+ ++v+lL 
  MMETSP1325-20131115|12785_1  2 GANVEIpfkGSMPLAIAQKQGHQDVVDLLR 31
                 455555555555666666666666666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 169.15
//
Query:       MMETSP1325-20131115|12778_1  [L=380]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-54  184.5   0.3    3.4e-54  183.1   0.2    1.7  1  PF00448.17 SRP54-type protein, GTPase domain
    5.4e-08   31.8   0.1    2.5e-07   29.6   0.1    1.9  1  PF03308.11 ArgK protein
    5.7e-07   29.0   0.3    2.3e-06   27.0   0.2    2.0  1  PF01656.18 CobQ/CobB/MinD/ParA nucleotide binding domain
      8e-07   28.9   0.7    1.7e-06   27.9   0.5    1.6  1  PF02881.14 SRP54-type protein, helical bundle domain
    3.8e-05   23.2   0.0    8.2e-05   22.1   0.0    1.5  1  PF13604.1  AAA domain
    0.00014   22.1   0.5    0.00049   20.3   0.0    2.1  2  PF13191.1  AAA ATPase domain
    0.00015   21.7   0.0    0.00045   20.2   0.0    1.8  2  PF13401.1  AAA domain
    0.00028   20.4   0.4    0.00071   19.1   0.1    1.8  2  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
    0.00087   18.9   0.9      0.043   13.4   0.1    2.9  3  PF03266.10 NTPase
     0.0071   15.4   0.1      0.016   14.2   0.1    1.6  1  PF00142.13 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
  ------ inclusion threshold ------
      0.014   15.2   0.1      0.075   12.9   0.1    2.2  1  PF01926.18 50S ribosome-binding GTPase
      0.014   14.6   0.1       0.41    9.9   0.0    2.3  2  PF02223.12 Thymidylate kinase
      0.023   14.2   0.0      0.055   13.0   0.0    1.6  1  PF01583.15 Adenylylsulphate kinase
      0.038   13.1   0.0      0.061   12.4   0.0    1.4  1  PF12846.2  AAA-like domain
      0.078   11.9   0.0       0.14   11.0   0.0    1.5  1  PF01591.13 6-phosphofructo-2-kinase
      0.086   11.9   0.1       0.29   10.2   0.0    2.0  2  PF03193.11 Protein of unknown function, DUF258
        0.1   12.3   0.0       0.23   11.2   0.0    1.6  1  PF13671.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00448.17  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.1   0.2   4.2e-57   3.4e-54       2     195 ..     175     379 ..     174     380 .] 0.94

  Alignments for each domain:
  == domain 1    score: 183.1 bits;  conditional E-value: 4.2e-57
                  EEEEEE-------TTTHHHHHHHHHHT---EEEEE--TSSHHHHHHHHHHHHHTT-EEEE-SS--EHHHHHHHHHHHHHHTT-SEEEEE----GTTCHHHHHHHHHHHHHSSSSEEEEEEETTS-HCHHHHHHHHHHHS..........---EEEEESTTT.-S----HHHHHHHTT--EEEEE----CCGCEE--HHHHHHHHC CS
   PF00448.17   2 nvillvGlqGaGKTTtlaKLAallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvikekeekdpaavakeavekakeekidvvlvDTaGrlqndkelmeelkkikkvlkpdevllvldatigqealkqakaFkeav..........eltgviltklDg.dakgGaalsiaaelklPikfigvGekiedleefdperlvsrll 195
                    i++vG++G+GK T+laK+  +lk++g kv+++a+DtfR +AveQL+ +a+ l+vp++++ + kdp +va++a+++  ++++dvvlvDTaGr+qn+++lm+el+k+ ++ +p+  l+v +a++g++ + q   F++a+          e++g++ltk+D+ d k Ga+ls+++++++P++f+g+G+k++ l++ + ++++++l+
  MMETSP1325-20131115|12778_1 175 YTIVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACDTFRSGAVEQLRSHARCLDVPLFEKGYLKDPGEVARAAIDEGTANGFDVVLVDTAGRMQNNDKLMKELAKLVQINDPNLLLFVGEALVGNDGIDQLLMFNKALqtyiprsqahEVDGIVLTKFDTiDDKVGATLSMSYKTGQPVMFVGTGQKYTHLKKLNVNSVIRALF 379
                  579************************************************************************************************************************************9865323333333379*********8689*************************************9987 PP

>> PF03308.11  ArgK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.1   3.1e-10   2.5e-07      13     145 ..     156     280 ..     136     291 .. 0.81

  Alignments for each domain:
  == domain 1    score: 29.6 bits;  conditional E-value: 3.1e-10
                  HHHHHHHHHHGGG..----EEE--B-------HHHHHH---HHHH----EEEEEE-------------------TTTT-TTEEEEEE---------HHHHHHHHHHHHH----EEEEE------HHHHHHTT-SS CS
   PF03308.11  13 peakellrkilpk..aGralvvGltGvPGaGkstlveklikelrrrGkrvavlavDPsspftGGsilGDrlRlerlavdegvfiRslasrGalGGlakktreviklldaaGfDvilvetvGvGqsevdiievadt 145
                  ++++++l++i+++   G+ + + + G+ G+Gkst + k+   l+++G +v + a D   +f  G++  ++lR +    d      +l  +G l    + +r++i    a GfDv+lv+t G  q + ++++    
  MMETSP1325-20131115|12778_1 156 KKSTDILHEIISHrsRGKPYTIVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACD---TFRSGAV--EQLRSHARCLDV-----PLFEKGYLKDPGEVARAAIDEGTANGFDVVLVDTAGRMQNNDKLMKELAK 280
                  488999999998622588899*********************************99...6889997..555555555554.....55567777777777888889999*************99988777765555 PP

>> PF01656.18  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.2   2.9e-09   2.3e-06       9     166 ..     184     341 ..     177     361 .. 0.74

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 2.9e-09
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxx RF
   PF01656.18   9 GvGKTtlaanLaralakrglrVlliDlDpqannssllgkvseilkkgeekasal...lenfeagllaegeeglvesllkkalealikeayDvviiDtapglgel........vanalqaadllvvviepekfs..vegakrilellerlgkk....lkilgvvlnkvdrgnerhl 166
                  GvGK+t  a  +++l+++g +V    +     +++  g+v e+l+               fe+g+l++       +++++a+++  ++ +Dvv++Dta+ +  +           ++++++ll+ v e+   +  +  ++ + ++l++   +    +++ g+vl+k+d+ +++  
  MMETSP1325-20131115|12778_1 184 GVGKSTSLAKVCYYLKQHGIKVMIAAC-----DTFRSGAV-EQLRSHA-----RcldVPLFEKGYLKD-----PGEVARAAIDEGTANGFDVVLVDTAGRMQNNdklmkelaKLVQINDPNLLLFVGEALVGNdgIDQLLMFNKALQTYI-PrsqaHEVDGIVLTKFDTIDDKVG 341
                  9**********************9888.....55555555.4444333.....245533589999999.....3456999999988777*********************6555567889999999998884446666666666666432.357789999*******98876654 PP

>> PF02881.14  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.5   2.1e-09   1.7e-06       5      67 ..      76     141 ..      72     153 .. 0.82

  Alignments for each domain:
  == domain 1    score: 27.9 bits;  conditional E-value: 2.1e-09
                  ----------..---------HHHHHHHHHHT----HHHHHHHHHHHHHHHH....H-----TTT- CS
   PF02881.14   5 lsktrnkltgklfltekkidelleeleeaLleaDVgvevvkkliervreklvg...kkgvspkeei 67 
                  l++++++ tg+++lt +++  +l+ ++++L++++V+ e++ +++e v+++lvg      +  k ++
  MMETSP1325-20131115|12778_1  76 LKNSLESATGNKVLTAEELAPVLDAMRQQLISKNVASEIALNITETVKASLVGqklASFTRVKTMV 141
                  88999********************************************99996663333333333 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0     1e-07   8.2e-05      21     121 ..     177     286 ..     163     296 .. 0.77

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 1e-07
    PF13604.1  21 avvqGpAGtGKttvlkalrealeaagkrvvglAptgkaakvLeeelgiearTiasllerldkeeaegrke...ldakt.....llvvDEAgmvdtrq..larlleaaekag 121
                   v +G  G GK+t+l+ +  +l++ g +v+++A       ++e+    +ar ++  l++++  ++ g+ +   +d++t     +++vD Ag +++++  +++l ++++ ++
  MMETSP1325-20131115|12778_1 177 IVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACDTFRSGAVEQL-RSHARCLDVPLFEKGYLKDPGEVAraaIDEGTangfdVVLVDTAGRMQNNDklMKELAKLVQIND 286
                  5667*****************************987666555544.7779999999988888777766667786666677777********99876433888888877654 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.3       2.5     2e+03      88     128 ..      18      54 ..       4     100 .. 0.71
   2 !   20.3   0.0   6.1e-07   0.00049      12     103 ..     162     248 ..     156     314 .. 0.73

  Alignments for each domain:
  == domain 1    score: -1.2 bits;  conditional E-value: 2.5
    PF13191.1  88 aelggwreallaalga.....lipelegiiglqalvalldaalart 128
                  a+l++                 + e+++ +++++ +++l+++++++
  MMETSP1325-20131115|12778_1  18 AQLAEY---------QakflpEEGEVAQWDEEEPDLEDLEDDEEEE 54 
                  333333.........1334444455888888887777777777665 PP

  == domain 2    score: 20.3 bits;  conditional E-value: 6.1e-07
    PF13191.1  12 Llaalrrvsegsp.lllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrnlpysaiiqalrellrqlltelaaelggwreallaalga 103
                  L++ ++  s+g p  ++++G  G+GKS+ l +++  + +++  +  + +d +        ++++lr+ +r+l      e g+ +++ + a +a
  MMETSP1325-20131115|12778_1 162 LHEIISHRSRGKPyTIVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACDTFRSG-----AVEQLRSHARCLDV-PLFEKGYLKDPGEVARAA 248
                  777888889999999***********************************99998.....45668888887754.444444455555544444 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.6   2.9e+03      58      58 ..     114     114 ..      68     162 .. 0.54
   2 !   20.2   0.0   5.7e-07   0.00045       4     116 ..     174     292 ..     169     307 .. 0.72

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 3.6
    PF13401.1  58 l 58 
                  +
  MMETSP1325-20131115|12778_1 114 I 114
                  1 PP

  == domain 2    score: 20.2 bits;  conditional E-value: 5.7e-07
    PF13401.1   4 agilvvtGesGvGKTtllrrlarqldeeaeaaekarvvfveapast.spkellqkllsalglpakg...rltteellealqealrrrrtrlliiDEaqrL..seealeelrslldd.....etg 116
                   + +v++G  GvGK+t+l ++   l+++      ++v+   +      + e l+  ++ l++p+ +    ++  e+ +a  +  ++++ +++++D a r+  ++++++el  l++         
  MMETSP1325-20131115|12778_1 174 PYTIVFVGINGVGKSTSLAKVCYYLKQH-----GIKVMIAACDTFRsGAVEQLRSHARCLDVPLFEkgyLKDPGEVARAAIDEGTANGFDVVLVDTAGRMqnNDKLMKELAKLVQIndpnlLLF 292
                  577999*****************99554.....55555555555555566668899999999999977777777777777777777777***********654888888887777433333333 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   8.8e-07   0.00071       3      35 ..     177     208 ..     175     216 .. 0.90
   2 ?   -3.2   0.0       6.7   5.4e+03      57      89 ..     256     284 ..     251     307 .. 0.54

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 8.8e-07
                  EEEE-------HHHHHHHHHHHHH-------EE CS
    PF03205.9   3 vavvGpkdsGKTtlieklvnklkergyrvavvk 35 
                  +++vG  ++GK+t + k++ +lk+ g++v+ + 
  MMETSP1325-20131115|12778_1 177 IVFVGINGVGKSTSLAKVCYYLKQHGIKVM-IA 208
                  89***************************9.44 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 6.7
                  ---EEEEE-SSEEEEEEE-SSS----HHHHHHC CS
    PF03205.9  57 gadlvlvsieeplavvtgfllekeadLeallsv 89 
                  g d+vlv +  +++  +++     ++L++l++ 
  MMETSP1325-20131115|12778_1 256 GFDVVLVDTAGRMQNNDKL----MKELAKLVQI 284
                  5555555555544444433....3344444443 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.2   9.9e+02     114     148 ..     137     169 ..     131     180 .. 0.60
   2 !   13.4   0.1   5.3e-05     0.043       3      39 ..     178     214 ..     176     222 .. 0.83
   3 ?    2.7   0.0       0.1        84      83     130 ..     243     291 ..     235     307 .. 0.72

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 1.2
                  HHHHHHHHHTTTSEEEEE--SS--SHHHHHHHT-- CS
   PF03266.10 114 fkeaveevlssekpvlatvhrrkelalveeirkrk 148
                  +k++v+++l+s    + t   +k++++++ei +++
  MMETSP1325-20131115|12778_1 137 VKTMVTQALKSAVLRVLT--PKKSTDILHEIISHR 169
                  567777777766544444..444456666665554 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 5.3e-05
                  EEE-------HHHHHHHHHH-...---EE--EEE--- CS
   PF03266.10   3 fiTGepgvGKtTlvkkvlellksegvkvgGfyteevr 39 
                  +  G  gvGK+T + kv+  lk++g+kv    +   r
  MMETSP1325-20131115|12778_1 178 VFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACDTFR 214
                  556899*********************9766665555 PP

  == domain 3    score: 2.7 bits;  conditional E-value: 0.1
                  HHHHHHHHHHH.HHH-EEEE------GGG-HHHHHHHHHHHT.TTSEEEE CS
   PF03266.10  83 elalpalrnal.eeadviviDEIGkmElkskkfkeaveevls.sekpvla 130
                  e+a  a+++ + ++ dv+++D  G+m  +  k+ ++++++++ +++++l 
  MMETSP1325-20131115|12778_1 243 EVARAAIDEGTaNGFDVVLVDTAGRMQNN-DKLMKELAKLVQiNDPNLLL 291
                  56666777666678899999999999766.45566667777756665555 PP

>> PF00142.13  4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1     2e-05     0.016       3      38 ..     177     212 ..     175     224 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 2e-05
   PF00142.13   3 iaiYGkGGiGksttsqnlaaalaemgkkvlivGCDP 38 
                  i + G  G+Gkst+ + + + l + g kv+i  CD 
  MMETSP1325-20131115|12778_1 177 IVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACDT 212
                  7788999***************************95 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   9.3e-05     0.075       2      85 ..     177     294 ..     176     323 .. 0.57

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.3e-05
                  EEEE--TT---HHHHHHHH......CSTCTE.......................ETS-TT-SSSESEEEE...................ETTE.....EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEE CS
   PF01926.18   2 vaivGrpNvGKStLinaLt......gekaak.......................vsdypgtTrditenev...................kkek.....iilvDtPGiiegasedkeiegikkylekveradvlllvv 85 
                  +++vG   vGKSt + + +      g k+ +                                      +                      +     ++lvDt+G ++  ++dk +++++k l ++++ ++ll+v 
  MMETSP1325-20131115|12778_1 177 IVFVGINGVGKSTSLAKVCyylkqhGIKVMIaacdtfrsgaveqlrsharcldvP--------------LfekgylkdpgevaraaideG--TangfdVVLVDTAGRMQ--NNDKLMKELAK-LVQINDPNLLLFVG 294
                  89****************9555433222322333333333333333333333331..............033333333333344444320..13454579******763..44554554443.55556666666665 PP

>> PF02223.12  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.097        78       8      53 ..      68     111 ..      65     145 .. 0.83
   2 ?    9.9   0.0    0.0005      0.41       3      29 ..     181     207 ..     179     213 .. 0.93

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.097
                  --HHHHHHHHHHHHHSEE-EEEESS-TTS----HHHHHHHTCS--- CS
   PF02223.12   8 GKttqaellkeklkeqgikvvltrepggteiGelirelllkeeele 53 
                  GK+ +  +lk+ l++++ + vlt e+   ++ + +r++l  +++++
  MMETSP1325-20131115|12778_1  68 GKSAVGSFLKNSLESATGNKVLTAEEL-APVLDAMRQQLI-SKNVA 111
                  9***************99999999987.677777777777.44444 PP

  == domain 2    score: 9.9 bits;  conditional E-value: 0.0005
                  --TT---HHHHHHHHHHHHHSEE-EEE CS
   PF02223.12   3 GlDGaGKttqaellkeklkeqgikvvl 29 
                  G++G+GK+t   ++  +lk+ gikv++
  MMETSP1325-20131115|12778_1 181 GINGVGKSTSLAKVCYYLKQHGIKVMI 207
                  9**********************9875 PP

>> PF01583.15  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.8e-05     0.055       2      49 ..     174     221 ..     173     226 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 6.8e-05
                  --EEEEE-ETT---HHHHHHHHHHHHCTS--EEEE---TTT----TT- CS
   PF01583.15   2 gvvvwltGlsgsGKstiavalekkLvekgikvylLdGdnvRhgLnkdL 49 
                  + ++ + G+ g GKst   ++  +L+++gikv++   d+ R g  ++L
  MMETSP1325-20131115|12778_1 174 PYTIVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACDTFRSGAVEQL 221
                  789*************9999*********************9987776 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.5e-05     0.061       2      37 ..     175     212 ..     174     320 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 7.5e-05
    PF12846.2   2 pntlilGppGsGKSvllkklvlqllargprvvii..Dp 37 
                  ++++++G  G GKS+ l k+++ l ++g +v+i   D+
  MMETSP1325-20131115|12778_1 175 YTIVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAacDT 212
                  6789****************************985554 PP

>> PF01591.13  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00018      0.14       8      59 ..     169     220 ..     163     251 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00018
   PF01591.13   8 nlknsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreavka 59 
                  + + ++  iv+vG+   gK++  +k++ ylk  g++  +     +r  av++
  MMETSP1325-20131115|12778_1 169 RSRGKPYTIVFVGINGVGKSTSLAKVCYYLKQHGIKVMIAACDTFRSGAVEQ 220
                  45678899***********************999887666666666555555 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00036      0.29      34      55 ..     173     194 ..     136     224 .. 0.71
   2 ?   -3.1   0.0       4.3   3.4e+03      25      49 ..     277     301 ..     261     315 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00036
                  TTSBEEEE-------HHHHHHH CS
   PF03193.11  34 kdktsvlvGqSGvGKSsLinal 55 
                  k  t+v+vG  GvGKS+ + ++
  MMETSP1325-20131115|12778_1 173 KPYTIVFVGINGVGKSTSLAKV 194
                  33699***********977665 PP

  == domain 2    score: -3.1 bits;  conditional E-value: 4.3
                  T-HHHHHHCTTSBEEEE-------H CS
   PF03193.11  25 gleelaellkdktsvlvGqSGvGKS 49 
                  +l++l +  + ++ ++vG++ vG  
  MMETSP1325-20131115|12778_1 277 ELAKLVQINDPNLLLFVGEALVGND 301
                  3333333333478888888877765 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00028      0.23       2      87 ..     177     274 ..     176     297 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00028
    PF13671.1   2 vllvGlpGsGKstlaerl...lkklg..yvrlsqdtlrkrlfgtdqqskt......dytrvlkrlyqilnklarkalsagrsviv.datnlsreerar 87 
                  +++vG  G GKst + ++   lk++g    +   dt+r+   ++ + + +      +    lk+  ++ ++ + +  ++g +v++ d   +++++ + 
  MMETSP1325-20131115|12778_1 177 IVFVGINGVGKSTSLAKVcyyLKQHGikVMIAACDTFRSGAVEQLRSHARcldvplFEKGYLKDPGEVARAAIDEGTANGFDVVLvDTAGRMQNNDKL 274
                  79************999866678888876677778888866654444333444444222233333344556677777777775551444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       754  (0.0551492); expected 273.4 (0.02)
Passed bias filter:                      586  (0.0428613); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.89u 0.40s 00:00:01.29 Elapsed: 00:00:00.78
# Mc/sec: 1167.46
//
Query:       MMETSP1325-20131115|12786_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       552  (0.0403745); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 953.55
//
Query:       MMETSP1325-20131115|12793_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-09   37.6   2.0    0.00036   20.9   0.0    2.2  2  PF08238.7  Sel1 repeat
     0.0091   16.4   1.1       0.35   11.5   0.3    2.3  2  PF13428.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.025   14.2   0.3        3.1    7.6   0.0    2.5  3  PF13176.1  Tetratricopeptide repeat
      0.026   14.3   2.4        2.9    7.9   0.6    2.6  3  PF07719.12 Tetratricopeptide repeat
      0.047   14.2   0.4      0.083   13.4   0.2    1.4  1  PF13432.1  Tetratricopeptide repeat
       0.12   12.2   0.1        2.8    7.8   0.0    2.2  2  PF13424.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   1.6   1.6e-05     0.037      23      38 ..       2      17 ..       1      18 [. 0.92
   2 !   20.9   0.0   1.6e-07   0.00036       2      39 .]      20      54 ..      19      54 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.6e-05
    PF08238.7 23 dpekAleWyekAAeqG 38
                 d+++A+ W+ekAA+q+
  MMETSP1325-20131115|12793_1  2 DYQQARAWLEKAAAQD 17
                 89************96 PP

  == domain 2    score: 20.9 bits;  conditional E-value: 1.6e-07
    PF08238.7  2 eAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 +A  +LG   my++G+ Gv++  ++A+e+ ++A e+G+
  MMETSP1325-20131115|12793_1 20 DAVRELG--VMYFEGW-GVTPSWRRARELCKRAIELGD 54
                 66678**..888****.8**99**************97 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.3   0.00015      0.35      16      42 ..       2      26 ..       1      28 [. 0.76
   2 ?    3.5   0.0     0.057   1.3e+02      17      32 ..      39      54 ..      38      64 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00015
    PF13428.1 16 dpdeAiallrralalaPddaealllLa 42
                 d+++A+a+l++a+a   d ++a ++L+
  MMETSP1325-20131115|12793_1  2 DYQQARAWLEKAAA--QDFPDAVRELG 26
                 799*********65..56666666665 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.057
    PF13428.1 17 pdeAiallrralalaP 32
                 + +A++l++ra++l+ 
  MMETSP1325-20131115|12793_1 39 WRRARELCKRAIELGD 54
                 679********99764 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.016        37      14      34 ..       2      20 ..       1      22 [. 0.85
   2 ?   -3.4   0.0       4.6     1e+04       5      10 ..      25      30 ..      23      31 .. 0.74
   3 ?    7.6   0.0    0.0014       3.1      15      34 ..      39      58 ..      38      60 .. 0.85

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.016
    PF13176.1 14 dyekAielyeraLaltkdpld 34
                 dy++A   +e+  a ++d  d
  MMETSP1325-20131115|12793_1  2 DYQQARAWLEK--AAAQDFPD 20
                 8**********..88888766 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 4.6
    PF13176.1  5 Larlys 10
                 L+++y+
  MMETSP1325-20131115|12793_1 25 LGVMYF 30
                 888886 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0014
    PF13176.1 15 yekAielyeraLaltkdpld 34
                 +++A el++ra++l +++  
  MMETSP1325-20131115|12793_1 39 WRRARELCKRAIELGDSQAV 58
                 99********9998888765 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.6    0.0013       2.9      16      31 ..       2      17 ..       1      20 [. 0.90
   2 ?   -2.1   0.0       1.9   4.4e+03       3      12 ..      21      30 ..      19      31 .. 0.72
   3 ?    5.2   0.0    0.0092        21      17      30 ..      39      52 ..      38      54 .. 0.90

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0013
                 -HHHHHHHHHHHHHH- CS
   PF07719.12 16 dyeeAleafekAleld 31
                 dy++A++++ekA + d
  MMETSP1325-20131115|12793_1  2 DYQQARAWLEKAAAQD 17
                 8***********9876 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.9
                 HHHHHHHHHH CS
   PF07719.12  3 alynlGlayy 12
                 a  +lG  y+
  MMETSP1325-20131115|12793_1 21 AVRELGVMYF 30
                 5568999998 PP

  == domain 3    score: 5.2 bits;  conditional E-value: 0.0092
                 HHHHHHHHHHHHHH CS
   PF07719.12 17 yeeAleafekAlel 30
                 + +A+e++++A+el
  MMETSP1325-20131115|12793_1 39 WRRARELCKRAIEL 52
                 578*********98 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   3.6e-05     0.083      12      64 ..       2      56 ..       1      57 [. 0.93

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.6e-05
    PF13432.1 12 dydeAlaaleaalalaPeaaeallllaeallrl....grldeAaallraalalaPdd 64
                 dy++A+a le+a a++   ++a  +l++++++       + +A++l ++a++l++++
  MMETSP1325-20131115|12793_1  2 DYQQARAWLEKAAAQD--FPDAVRELGVMYFEGwgvtPSWRRARELCKRAIELGDSQ 56
                 89**************..888*****************************9998876 PP

>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0012       2.8      20      33 ..       2      15 ..       1      31 [. 0.74
   2 ?    2.6   0.0      0.05   1.1e+02      21      34 ..      39      52 ..      38      66 .. 0.78

  Alignments for each domain:
  == domain 1    score: 7.8 bits;  conditional E-value: 0.0012
    PF13424.1 20 dydeAlelyekale 33
                 dy++A++++eka +
  MMETSP1325-20131115|12793_1  2 DYQQARAWLEKAAA 15
                 67777777777775 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.05
    PF13424.1 21 ydeAlelyekalel 34
                 + +A+el+++a+el
  MMETSP1325-20131115|12793_1 39 WRRARELCKRAIEL 52
                 66888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 396.32
//
Query:       MMETSP1325-20131115|12792_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-22   78.3   0.5    4.5e-22   77.2   0.3    1.7  2  PF01849.13 NAC domain
     0.0027   17.3   0.5     0.0047   16.5   0.3    1.4  1  PF00627.26 UBA/TS-N domain
  ------ inclusion threshold ------
       0.23   11.5   4.5       0.19   11.8   0.7    2.0  2  PF14000.1  DNA packaging protein FI


Domain annotation for each model (and alignments):
>> PF01849.13  NAC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.3   9.9e-26   4.5e-22       1      58 []      58     115 ..      58     115 .. 0.98
   2 ?   -2.8   0.0      0.94   4.3e+03      27      38 ..     161     171 ..     159     177 .. 0.71

  Alignments for each domain:
  == domain 1    score: 77.2 bits;  conditional E-value: 9.9e-26
                  XXXXXXXXXXXX-EEE----EEEEE-----EEEEEEEEEEEETTTTEEEEE-EEEEE- CS
   PF01849.13   1 ekKlqkalkklglkeiegveeVtirkkdgkvlvfnnPeVqkspgsntyvvfGeakekd 58 
                  ekK +ka++klg+k ++++ +Vt++k++++++v+++P+V+ksp s+ty++fGeak +d
  MMETSP1325-20131115|12792_1  58 EKKSRKAMQKLGMKAVPDIIRVTVKKSKNILFVISRPDVFKSPSSDTYIIFGEAKIED 115
                  8******************************************************886 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.94
                  ----EEEEEEEE CS
   PF01849.13  27 kdgkvlvfnnPe 38 
                  kd ++lv+n++ 
  MMETSP1325-20131115|12792_1 161 KD-IELVMNQAV 171
                  34.899999886 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.3     1e-06    0.0047       2      37 .]     159     195 ..     158     195 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1e-06
                  THHHHHHHHH----HH.HHHHHHHHTTTSHHHHHHHH CS
   PF00627.26   2 deeaiqqLreMGfsre.eakkALratnnnvErAveyL 37 
                  d+++i+ ++ + +++   a+ AL+++++++  A++ L
  MMETSP1325-20131115|12792_1 159 DAKDIELVMNQAVCTRaKAITALKNNDGDIVNAIMEL 195
                  8999*******966666*****************976 PP

>> PF14000.1  DNA packaging protein FI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.7   4.1e-05      0.19      33      92 ..      14      73 ..       8      91 .. 0.55
   2 ?    1.1   0.1     0.081   3.7e+02      56     103 ..     145     189 ..     114     197 .] 0.55

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 4.1e-05
    PF14000.1 33 vaElEeEldqvaeedtassdekaltssedeavseqgevvtqaegelvtvrvlatlhldal 92
                 +aE+EeE+ + +e  + ++  +a++++e+    + + + +q+++e++++++ ++l ++a+
  MMETSP1325-20131115|12792_1 14 MAEFEEEVPELEEPAELEEPAEAEEEEEEAGGDDGEGAGKQNRSEKKSRKAMQKLGMKAV 73
                 456666665333333333333222222222222323333366777777777777777665 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.081
    PF14000.1  56 ltssedeavseqgevvtqaegelvtvrvlatlhldaldaernepvelv 103
                     ++de+v e+g    +a++ +  +   ++   +a+ a +n+  ++v
  MMETSP1325-20131115|12792_1 145 PAGDDDEVVDETGV---DAKDIELVMNQAVCTRAKAITALKNNDGDIV 189
                  23334444444442...3333333333444445555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       682  (0.049883); expected 273.4 (0.02)
Passed bias filter:                      465  (0.0340111); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 1004.43
//
Query:       MMETSP1325-20131115|12797_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.62
# Mc/sec: 332.40
//
Query:       MMETSP1325-20131115|12801_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 530.26
//
Query:       MMETSP1325-20131115|12803_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.7   0.1      0.029   13.6   0.1    1.4  1  PF00664.18 ABC transporter transmembrane region
      0.028   13.6   0.1      0.058   12.6   0.0    1.6  2  PF03208.14 PRA1 family protein
      0.029   13.8   0.8      0.051   13.0   0.6    1.3  1  PF04714.8  BCL7, N-terminal conserver region
       0.51   11.0   3.1        0.8   10.4   0.0    2.4  3  PF02950.12 Conotoxin


Domain annotation for each model (and alignments):
>> PF00664.18  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   8.6e-06     0.029     125     186 ..       5      66 ..       2      67 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 8.6e-06
   PF00664.18 125 slatfvgglivmfylgwkltlvllailpllilvsavlakilkslqkkeqkayakagavaeEa 186
                  ++++ ++ +  ++++ + ++++ ++++ l++l+++ ++ +lk ++++ q+a ak  + ++Ea
  MMETSP1325-20131115|12803_1   5 YFLVTLSFVFAYVFFLPLFLFGAVLTTALCLLLFKLVMPWLKGKEQDDQEALAKYEKDIQEA 66 
                  5666777777788888888999999*****************************99998886 PP

>> PF03208.14  PRA1 family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.7e-05     0.058      45     100 ..       5      56 ..       3     100 .. 0.87
   2 ?   -2.3   0.0      0.65   2.2e+03      93     108 ..     169     184 ..     149     192 .. 0.54

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.7e-05
   PF03208.14  45 Yfivvllvlllslltnplslivlllllaawlflyflraeneplvlfgrqfsdrevl 100
                  Yf+v l ++++ +++ pl+l+ ++l++a++l+l++l        l+g++++d+e+l
  MMETSP1325-20131115|12803_1   5 YFLVTLSFVFAYVFFLPLFLFGAVLTTALCLLLFKLVM----PWLKGKEQDDQEAL 56 
                  9********************************99887....45555555555554 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 0.65
   PF03208.14  93 qfsdrevligllivsv 108
                   ++d   +++l + ++
  MMETSP1325-20131115|12803_1 169 GLNDMMRVAVLALTTI 184
                  4444444444444433 PP

>> PF04714.8  BCL7, N-terminal conserver region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.6   1.5e-05     0.051       3      26 ..     142     165 ..     140     167 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1.5e-05
    PF04714.8   3 RsvRAEtRsRakDelkkviqalek 26 
                  R  RA  R RakD+ k  +q + k
  MMETSP1325-20131115|12803_1 142 RRPRASRRRRAKDDFKTFMQHITK 165
                  6679****************9987 PP

>> PF02950.12  Conotoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00023       0.8       6      69 ..      28      89 ..      25      94 .. 0.68
   2 ?   -3.2   0.0         4   1.4e+04      35      39 ..     148     152 ..     139     165 .. 0.44
   3 ?    0.5   0.1      0.28   9.7e+02       6      19 ..     173     186 ..     169     189 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.00023
                 XXXXXXXXXX.X....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEB-TTSB-..STTTTCBSS-BE CS
   PF02950.12  6 vlivalLllt.tlvtadldgdqpakrkakrledrkseekkklkksceekgefc..dkrgkrCCsgaC 69
                 vl++al ll  +lv++ l+g+++++++a ++ +++ +e+         + + c   +++++ C+ +C
  MMETSP1325-20131115|12803_1 28 VLTTALCLLLfKLVMPWLKGKEQDDQEALAKYEKDIQEAADEG-----NLSWCngRWAKQQFCNAVC 89
                 66666644444799**999999999998887777655554332.....2345555688888888888 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 4
                  XXXXX CS
   PF02950.12  35 ledrk 39 
                  +++r 
  MMETSP1325-20131115|12803_1 148 RRRRA 152
                  22222 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.28
                  XXXXXXXXXXX... CS
   PF02950.12   6 vlivalLllttlvt 19 
                  ++ va+L ltt++ 
  MMETSP1325-20131115|12803_1 173 MMRVAVLALTTITL 186
                  899*******7654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       837  (0.06122); expected 273.4 (0.02)
Passed bias filter:                      633  (0.046299); expected 273.4 (0.02)
Passed Vit filter:                        53  (0.00387654); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.44s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 845.26
//
Query:       MMETSP1325-20131115|12807_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.08   12.4   0.6      0.093   12.1   0.4    1.1  1  PF12810.2 Glycine rich protein


Domain annotation for each model (and alignments):
>> PF12810.2  Glycine rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.4   6.8e-06     0.093     113     167 ..      32      87 ..      17     114 .. 0.52

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.8e-06
    PF12810.2 113 GGGGGsgndsdssggsgggleggngtsngs.nstggtqtsggegassnengsfgsg 167
                  GGGG ++ d+d +gg g g  g + t ++  ++++  +t  +e  ++++ gs+  +
  MMETSP1325-20131115|12807_1  32 GGGGEADADADADGGDGDGDMGREITADELmDMFFSETTPDEEDPKQGQAGSEWHD 87 
                  55555666889*************99776654444444444443333222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 496.39
//
Query:       MMETSP1325-20131115|12802_1  [L=406]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-11   44.2  62.0    0.00013   21.9   4.4    5.7  5  PF07974.8 EGF-like domain


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   6.4     4e-05      0.55       1      27 [.      23      45 ..      23      48 .. 0.85
   2 !   19.0   7.8   7.6e-08     0.001       7      32 .]      81     106 ..      76     106 .. 0.93
   3 !    9.8   2.5   5.5e-05      0.75       1      15 [.     111     122 ..     111     123 .. 0.87
   4 !    6.3   0.6   0.00072       9.8      20      32 .]     168     180 ..     163     180 .. 0.89
   5 !   21.9   4.4   9.5e-09   0.00013       6      32 .]     373     399 ..     367     399 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 4e-05
    PF07974.8  1 CsadgliCgghGtCvkqcgkCvCdsgy 27
                 C++    C+ghG+C+++ + C+Cd+ y
  MMETSP1325-20131115|12802_1 23 CPN---MCSGHGSCRDD-NWCECDKDY 45
                 885...5********87.68***9987 PP

  == domain 2    score: 19.0 bits;  conditional E-value: 7.6e-08
    PF07974.8   7 iCgghGtCvkqcgkCvCdsgyqGktC 32 
                  +C g G+C++ +g C+C +gy+Gk C
  MMETSP1325-20131115|12802_1  81 ECAGKGICDRGTGECDCFDGYTGKGC 106
                  5********88**************9 PP

  == domain 3    score: 9.8 bits;  conditional E-value: 5.5e-05
    PF07974.8   1 CsadgliCgghGtCv 15 
                  C++d   C+ghGtC+
  MMETSP1325-20131115|12802_1 111 CPND---CSGHGTCE 122
                  9964...*******7 PP

  == domain 4    score: 6.3 bits;  conditional E-value: 0.00072
    PF07974.8  20 kCvCdsgyqGktC 32 
                  kCvCd+g++  +C
  MMETSP1325-20131115|12802_1 168 KCVCDKGFFEIDC 180
                  8*******99988 PP

  == domain 5    score: 21.9 bits;  conditional E-value: 9.5e-09
    PF07974.8   6 liCgghGtCvkqcgkCvCdsgyqGktC 32 
                   +Cg +G+C+ ++g C+C  g+ G tC
  MMETSP1325-20131115|12802_1 373 YECGRRGKCDYDTGLCECFTGFVGETC 399
                  47********88*************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.45s 00:00:01.07 Elapsed: 00:00:00.57
# Mc/sec: 1677.45
//
Query:       MMETSP1325-20131115|12811_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 271.89
//
Query:       MMETSP1325-20131115|12810_1  [L=189]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-43  146.8   8.8    1.3e-15   56.9   0.2    3.9  4  PF13424.1  Tetratricopeptide repeat
    2.8e-36  122.2   9.4    4.1e-11   42.2   0.0    5.0  5  PF13374.1  Tetratricopeptide repeat
    5.7e-13   47.4   4.6      2e-05   23.9   0.1    4.7  4  PF13176.1  Tetratricopeptide repeat
    5.7e-13   48.1   1.3    2.8e-11   42.7   0.1    3.1  3  PF13414.1  TPR repeat
      3e-11   42.2   4.4    4.2e-05   22.8   0.1    3.4  4  PF00515.23 Tetratricopeptide repeat
    3.5e-11   42.0   7.0    0.00026   20.5   0.1    4.0  4  PF07719.12 Tetratricopeptide repeat
    2.7e-07   30.9   6.4    2.1e-05   24.9   1.0    3.9  3  PF13432.1  Tetratricopeptide repeat
    7.8e-07   28.3   0.3      0.065   12.9   0.0    3.0  3  PF13181.1  Tetratricopeptide repeat
    1.9e-06   27.8   9.3       0.02   15.4   0.3    4.3  4  PF13428.1  Tetratricopeptide repeat
    0.00014   21.6   1.3       0.67   10.1   0.0    3.6  3  PF13431.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.015   15.6   1.0         16    5.9   0.0    3.6  4  PF14357.1  Domain of unknown function (DUF4404)
      0.019   14.8   0.6        1.2    9.0   0.0    3.2  3  PF08590.5  Domain of unknown function (DUF1771)
      0.024   14.3   0.4        4.7    7.0   0.0    3.0  2  PF04212.13 MIT (microtubule interacting and transport) domain
       0.18   12.0   0.7        2.1    8.7   0.1    2.8  3  PF13812.1  Pentatricopeptide repeat domain
       0.36   11.2   4.0         29    5.3   0.1    3.3  3  PF13174.1  Tetratricopeptide repeat
       0.47   10.9   0.3       0.47   10.9   0.2    4.3  4  PF07721.9  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13424.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.2   1.6e-18   1.3e-15      18      75 ..       6      64 ..       2      67 .. 0.96
   2 !   53.1   0.3   2.3e-17     2e-14      21      78 .]      51     109 ..      51     109 .. 0.95
   3 !   43.7   0.0     2e-14   1.7e-11       1      71 [.      73     145 ..      73     146 .. 0.92
   4 !   15.4   0.0   1.4e-05     0.012      18      56 ..     144     183 ..     138     187 .. 0.83

  Alignments for each domain:
  == domain 1    score: 56.9 bits;  conditional E-value: 1.6e-18
    PF13424.1 18 lgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAlei 75
                  g+++eA+ l +++l++  + +g+dhp +a++lnnla++++a+g +deA++++++A+ei
  MMETSP1325-20131115|12810_1  6 RGNLKEAERLDRRCLAIkTAAHGPDHPSRAVTLNNLAQTCRARGALDEAEKLYRQAVEI 64
                 79***************9999************************************98 PP

  == domain 2    score: 53.1 bits;  conditional E-value: 2.3e-17
    PF13424.1  21 ydeAlelyekalel.lrelgddhpdtaralnnlanlylalgdydeAleylekAleiaek 78 
                  +deA++ly++a+e+   ++gd hp +a++lnnl+ + +++gd ++A+ +l++Al+i+e+
  MMETSP1325-20131115|12810_1  51 LDEAEKLYRQAVEIwDGVYGDGHPLVATVLNNLGLIVYQRGDKEQAKLLLRRALAIDEA 109
                  59************55589*************************************985 PP

  == domain 3    score: 43.7 bits;  conditional E-value: 2e-14
    PF13424.1   1 hpdlatilnnlalvlrrlgdydeAlelyekalel.lrelgddhpdtaralnnlanlylalg.dydeAleylek 71 
                  hp +at+lnnl+l+ ++ gd ++A  l+++al++  +++g+ hp +ar  nnla+++++ + ++d++ + +e+
  MMETSP1325-20131115|12810_1  73 HPLVATVLNNLGLIVYQRGDKEQAKLLLRRALAIdEAVFGPSHPSVARDQNNLADVLARPEsEHDASTDSYEQ 145
                  899******************************************************9966467777777765 PP

  == domain 4    score: 15.4 bits;  conditional E-value: 1.4e-05
    PF13424.1  18 lgdydeAlelyekalellrel.gddhpdtaralnnlanly 56 
                  +++ +eA el+++++++++++ g++hp   ++  nl +++
  MMETSP1325-20131115|12810_1 144 EQRRQEAVELLKRSVAIFESFyGENHPHARSVQDNLVRIL 183
                  6899*************99977*****9666667776665 PP

>> PF13374.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.1   3.7e-09   3.2e-06      14      41 ..       5      32 ..       3      33 .. 0.96
   2 !   39.9   0.1   2.5e-13   2.2e-10       2      41 ..      35      74 ..      34      75 .. 0.97
   3 !   42.2   0.0   4.8e-14   4.1e-11       1      41 [.      76     116 ..      76     117 .. 0.98
   4 ?    0.6   0.0       0.6   5.1e+02       3      13 ..     120     130 ..     118     131 .. 0.75
   5 !   15.0   0.0   1.8e-05     0.016      17      42 .]     146     171 ..     142     171 .. 0.94

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 3.7e-09
    PF13374.1 14 argryeeAlaleeealairrrllGddHP 41
                 arg++ eA++l++++lai+++ +G+dHP
  MMETSP1325-20131115|12810_1  5 ARGNLKEAERLDRRCLAIKTAAHGPDHP 32
                 79*************************9 PP

  == domain 2    score: 39.9 bits;  conditional E-value: 2.5e-13
    PF13374.1  2 aaalnnLAlalrargryeeAlaleeealairrrllGddHP 41
                 a +lnnLA ++rarg ++eA++l+++a++i+  ++Gd HP
  MMETSP1325-20131115|12810_1 35 AVTLNNLAQTCRARGALDEAEKLYRQAVEIWDGVYGDGHP 74
                 789************************************9 PP

  == domain 3    score: 42.2 bits;  conditional E-value: 4.8e-14
    PF13374.1   1 taaalnnLAlalrargryeeAlaleeealairrrllGddHP 41 
                  +a+ lnnL+l+ ++rg+ e+A  l+++alai ++++G+ HP
  MMETSP1325-20131115|12810_1  76 VATVLNNLGLIVYQRGDKEQAKLLLRRALAIDEAVFGPSHP 116
                  799*************************************9 PP

  == domain 4    score: 0.6 bits;  conditional E-value: 0.6
    PF13374.1   3 aalnnLAlalr 13 
                  + +nnLA +l+
  MMETSP1325-20131115|12810_1 120 RDQNNLADVLA 130
                  558****9987 PP

  == domain 5    score: 15.0 bits;  conditional E-value: 1.8e-05
    PF13374.1  17 ryeeAlaleeealairrrllGddHPd 42 
                  r++eA++l+ +++ai +  +G++HP+
  MMETSP1325-20131115|12810_1 146 RRQEAVELLKRSVAIFESFYGENHPH 171
                  89***********************6 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.16   1.4e+02      12      31 ..       6      25 ..       5      30 .. 0.84
   2 !   23.9   0.1   2.3e-08     2e-05       1      30 [.      37      66 ..      37      72 .. 0.86
   3 !   11.6   0.0   0.00019      0.17       1      34 [.      79     112 ..      79     114 .. 0.86
   4 !    7.6   0.1    0.0038       3.2      10      31 ..     142     163 ..     123     168 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.16
    PF13176.1 12 lgdyekAielyeraLaltkd 31
                 +g+ ++A++l +r+La++ +
  MMETSP1325-20131115|12810_1  6 RGNLKEAERLDRRCLAIKTA 25
                 6999*********9999865 PP

  == domain 2    score: 23.9 bits;  conditional E-value: 2.3e-08
    PF13176.1  1 allnLarlysrlgdyekAielyeraLaltk 30
                 +l+nLa++++++g  ++A++ly++a ++++
  MMETSP1325-20131115|12810_1 37 TLNNLAQTCRARGALDEAEKLYRQAVEIWD 66
                 79**********************655554 PP

  == domain 3    score: 11.6 bits;  conditional E-value: 0.00019
    PF13176.1   1 allnLarl.ysrlgdyekAielyeraLaltkdpld 34 
                  +l+nL+ + y+r gd e+A  l++raLa++++ ++
  MMETSP1325-20131115|12810_1  79 VLNNLGLIvYQR-GDKEQAKLLLRRALAIDEAVFG 112
                  599*****6666.************9999988776 PP

  == domain 4    score: 7.6 bits;  conditional E-value: 0.0038
    PF13176.1  10 srlgdyekAielyeraLaltkd 31 
                  s  +++++A+el++r+ a+ ++
  MMETSP1325-20131115|12810_1 142 SYEQRRQEAVELLKRSVAIFES 163
                  55789**********8777555 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0011      0.92      16      51 ..       6      49 ..       5      49 .. 0.79
   2 !   42.7   0.1   3.3e-14   2.8e-11       2      68 ..      34     107 ..      33     108 .. 0.90
   3 ?    2.0   0.0      0.17   1.5e+02      16      32 ..     144     160 ..     117     174 .. 0.72

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0011
    PF13414.1 16 egdydeAieayekAleld.....pnnae...lyynlAlaylklg 51
                 +g+++eA+++ +++l++      p++++    ++nlA++ + +g
  MMETSP1325-20131115|12810_1  6 RGNLKEAERLDRRCLAIKtaahgPDHPSravTLNNLAQTCRARG 49
                 79***************66677755555555******9877665 PP

  == domain 2    score: 42.7 bits;  conditional E-value: 3.3e-14
    PF13414.1   2 nAealkelGnalfkegdydeAieayekAleld........pnnaelyynlAlaylklgkdyeeAledyekAleld 68 
                  +A +l++l++ +  +g +deA+++y++A+e++        p  a +++nl+l+ +++g+  e+A   +++Al++d
  MMETSP1325-20131115|12810_1  34 RAVTLNNLAQTCRARGALDEAEKLYRQAVEIWdgvygdghPLVATVLNNLGLIVYQRGD-KEQAKLLLRRALAID 107
                  7999***************************86777655566677*************6.6************99 PP

  == domain 3    score: 2.0 bits;  conditional E-value: 0.17
    PF13414.1  16 egdydeAieayekAlel 32 
                  e++ +eA+e++++++++
  MMETSP1325-20131115|12810_1 144 EQRRQEAVELLKRSVAI 160
                  56777888888888776 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       5.8     5e+03      14      21 ..       6      13 ..       5      15 .. 0.79
   2 !   22.8   0.1   4.9e-08   4.2e-05       1      30 [.      35      64 ..      35      66 .. 0.95
   3 !   18.9   0.1   8.4e-07   0.00071       1      32 [.      77     108 ..      77     109 .. 0.94
   4 ?   -0.0   0.0      0.79   6.8e+02      18      33 ..     148     163 ..     143     164 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 5.8
                 TT-HHHHH CS
   PF00515.23 14 lgkydeAl 21
                  g+++eA+
  MMETSP1325-20131115|12810_1  6 RGNLKEAE 13
                 58999997 PP

  == domain 2    score: 22.8 bits;  conditional E-value: 4.9e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF00515.23  1 akalynlGnaylklgkydeAleyyekALel 30
                 a +l+nl+++++  g +deA++ y++A+e+
  MMETSP1325-20131115|12810_1 35 AVTLNNLAQTCRARGALDEAEKLYRQAVEI 64
                 6789************************98 PP

  == domain 3    score: 18.9 bits;  conditional E-value: 8.4e-07
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHT CS
   PF00515.23   1 akalynlGnaylklgkydeAleyyekALelnP 32 
                  a +l+nlG++ ++ g+ ++A    ++AL +++
  MMETSP1325-20131115|12810_1  77 ATVLNNLGLIVYQRGDKEQAKLLLRRALAIDE 108
                  5689**************************95 PP

  == domain 4    score: -0.0 bits;  conditional E-value: 0.79
                  HHHHHHHHHHHHHHTT CS
   PF00515.23  18 deAleyyekALelnPn 33 
                  +eA+e  ++ + + ++
  MMETSP1325-20131115|12810_1 148 QEAVELLKRSVAIFES 163
                  89***99999988665 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.8   1.5e+03      14      23 ..       6      15 ..       5      22 .. 0.74
   2 !   19.2   0.1   7.7e-07   0.00066       3      30 ..      37      64 ..      35      64 .. 0.93
   3 !   20.5   0.1   3.1e-07   0.00026       1      32 [.      77     108 ..      77     109 .. 0.94
   4 ?    3.5   0.0     0.087        74      14      31 ..     144     161 ..     141     164 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 1.8
                 TT-HHHHHHH CS
   PF07719.12 14 lgdyeeAlea 23
                 +g+++eA+++
  MMETSP1325-20131115|12810_1  6 RGNLKEAERL 15
                 6889998765 PP

  == domain 2    score: 19.2 bits;  conditional E-value: 7.7e-07
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF07719.12  3 alynlGlayyklgdyeeAleafekAlel 30
                  l+nl++ ++++g ++eA++++++A+e+
  MMETSP1325-20131115|12810_1 37 TLNNLAQTCRARGALDEAEKLYRQAVEI 64
                 699**********************996 PP

  == domain 3    score: 20.5 bits;  conditional E-value: 3.1e-07
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
   PF07719.12   1 aealynlGlayyklgdyeeAleafekAleldP 32 
                  a +l+nlGl+ y++gd e+A+ ++++Al++d 
  MMETSP1325-20131115|12810_1  77 ATVLNNLGLIVYQRGDKEQAKLLLRRALAIDE 108
                  5689*************************995 PP

  == domain 4    score: 3.5 bits;  conditional E-value: 0.087
                  TT-HHHHHHHHHHHHHH- CS
   PF07719.12  14 lgdyeeAleafekAleld 31 
                   ++ +eA+e+++++++++
  MMETSP1325-20131115|12810_1 144 EQRRQEAVELLKRSVAIF 161
                  5789*********99986 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.5   8.5e-06    0.0073      27      62 ..      29      66 ..       5      68 .. 0.79
   2 !   24.9   1.0   2.5e-08   2.1e-05      10      61 ..      48     107 ..      47     113 .. 0.94
   3 ?    0.1   0.0       1.5   1.2e+03      13      27 ..     147     161 ..     137     185 .. 0.60

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 8.5e-06
    PF13432.1 27 a..PeaaeallllaeallrlgrldeAaallraalalaP 62
                 +  P  a  l +la+++ ++g ldeA++l+r+a+++++
  MMETSP1325-20131115|12810_1 29 PdhPSRAVTLNNLAQTCRARGALDEAEKLYRQAVEIWD 66
                 1558899999***********************98776 PP

  == domain 2    score: 24.9 bits;  conditional E-value: 2.5e-08
    PF13432.1  10 aGdydeAlaaleaalala........PeaaeallllaeallrlgrldeAaallraalala 61 
                  +G +deA++++++a++ +        P+ a +l +l+ + +++g+ ++A  llr+ala++
  MMETSP1325-20131115|12810_1  48 RGALDEAEKLYRQAVEIWdgvygdghPLVATVLNNLGLIVYQRGDKEQAKLLLRRALAID 107
                  6889****************************************************9876 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 1.5
    PF13432.1  13 ydeAlaaleaalala 27 
                   +eA+++l++ +a +
  MMETSP1325-20131115|12810_1 147 RQEAVELLKRSVAIF 161
                  455555555555444 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00013      0.11       4      30 ..      38      64 ..      35      64 .. 0.94
   2 !   12.9   0.0   7.7e-05     0.065       3      32 ..      79     108 ..      77     110 .. 0.92
   3 ?   -2.3   0.0       5.5   4.7e+03       6      25 ..     124     144 ..     123     145 .. 0.63

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00013
                 TTT---HHHHTT-HHHHHHHHH---HH CS
    PF13181.1  4 yynlGdiYrqlGdydkAkeylekalel 30
                 ++nl+++ r  G  d+A++ +++a+e+
  MMETSP1325-20131115|12810_1 38 LNNLAQTCRARGALDEAEKLYRQAVEI 64
                 89***********************97 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 7.7e-05
                  -TTT---HHHHTT-HHHHHHHHH---HHHH CS
    PF13181.1   3 ayynlGdiYrqlGdydkAkeylekalelkp 32 
                  +++nlG+i  q Gd+++Ak  l++al ++ 
  MMETSP1325-20131115|12810_1  79 VLNNLGLIVYQRGDKEQAKLLLRRALAIDE 108
                  799***********************9985 PP

  == domain 3    score: -2.3 bits;  conditional E-value: 5.5
                  T---HHHH.TT-HHHHHHHHH CS
    PF13181.1   6 nlGdiYrq.lGdydkAkeyle 25 
                  nl+d+++    ++d++  ++e
  MMETSP1325-20131115|12810_1 124 NLADVLARpESEHDASTDSYE 144
                  677776655556677777776 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.2     0.017        15      13      42 ..       5      42 ..       4      43 .. 0.72
   2 !   15.4   0.3   2.3e-05      0.02       4      29 ..      38      63 ..      34      68 .. 0.89
   3 !    8.4   0.2     0.004       3.4       6      31 ..      82     107 ..      77     128 .. 0.81
   4 ?    1.9   0.0      0.49   4.1e+02      16      31 ..     146     161 ..     142     182 .. 0.79

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.017
    PF13428.1 13 alGdpdeAiallrrala........laPddaealllLa 42
                 a+G+++eA++l rr la        ++P++a  l +La
  MMETSP1325-20131115|12810_1  5 ARGNLKEAERLDRRCLAiktaahgpDHPSRAVTLNNLA 42
                 68************998777774444555555555555 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 2.3e-05
    PF13428.1  4 llalarallalGdpdeAiallrrala 29
                 l  la+ ++a+G +deA++l+r+a++
  MMETSP1325-20131115|12810_1 38 LNNLAQTCRARGALDEAEKLYRQAVE 63
                 5689********************97 PP

  == domain 3    score: 8.4 bits;  conditional E-value: 0.004
    PF13428.1   6 alarallalGdpdeAiallrralala 31 
                   l+ +  ++Gd ++A  llrrala +
  MMETSP1325-20131115|12810_1  82 NLGLIVYQRGDKEQAKLLLRRALAID 107
                  56667789***************965 PP

  == domain 4    score: 1.9 bits;  conditional E-value: 0.49
    PF13428.1  16 dpdeAiallrralala 31 
                  + +eA++ll+r +a +
  MMETSP1325-20131115|12810_1 146 RRQEAVELLKRSVAIF 161
                  5689******999865 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00079      0.67       9      34 .]      31      56 ..      28      56 .. 0.94
   2 !    8.2   0.0    0.0032       2.7       9      33 ..      73      97 ..      57      98 .. 0.84
   3 ?   -0.9   0.0       2.7   2.3e+03      17      22 ..     123     128 ..      99     138 .. 0.60

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00079
    PF13431.1  9 dPnnadaynnLAelllnnGdleeAeq 34
                 +P  a+ +nnLA++  ++G l+eAe+
  MMETSP1325-20131115|12810_1 31 HPSRAVTLNNLAQTCRARGALDEAEK 56
                 7999******************9985 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.0032
    PF13431.1  9 dPnnadaynnLAelllnnGdleeAe 33
                 +P  a ++nnL+++ + +Gd e+A+
  MMETSP1325-20131115|12810_1 73 HPLVATVLNNLGLIVYQRGDKEQAK 97
                 5677899***************996 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 2.7
    PF13431.1  17 nnLAel 22 
                  nnLA +
  MMETSP1325-20131115|12810_1 123 NNLADV 128
                  455555 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.44   3.7e+02      65      79 ..      30      44 ..      10      49 .. 0.89
   2 ?   -1.1   0.0       2.7   2.3e+03      66      77 ..      73      84 ..      69      91 .. 0.82
   3 ?    5.9   0.0     0.018        16      60      82 ..     109     131 ..      87     131 .. 0.75
   4 ?    4.0   0.0     0.068        58      42      80 ..     141     183 ..     133     185 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.4 bits;  conditional E-value: 0.44
    PF14357.1 65 eHPklagtlrnilds 79
                 +HP+ a tl+n++++
  MMETSP1325-20131115|12810_1 30 DHPSRAVTLNNLAQT 44
                 8**********9987 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 2.7
    PF14357.1 66 HPklagtlrnil 77
                 HP +a +l+n+ 
  MMETSP1325-20131115|12810_1 73 HPLVATVLNNLG 84
                 999999999875 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.018
    PF14357.1  60 erFeaeHPklagtlrnildsLan 82 
                  + F  +HP++a+  +n++d+La+
  MMETSP1325-20131115|12810_1 109 AVFGPSHPSVARDQNNLADVLAR 131
                  45999****************96 PP

  == domain 4    score: 4.0 bits;  conditional E-value: 0.068
    PF14357.1  42 daseaedeslaerlneaverFe....aeHPklagtlrnildsL 80 
                  d+ e+++++ +e l++ v+ Fe    ++HP+  ++  n++ +L
  MMETSP1325-20131115|12810_1 141 DSYEQRRQEAVELLKRSVAIFEsfygENHPHARSVQDNLVRIL 183
                  5556667777777777777777555579****99999999988 PP

>> PF08590.5  Domain of unknown function (DUF1771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0         1   8.7e+02      26      42 ..      45      61 ..      24      65 .. 0.68
   2 ?    9.0   0.0    0.0015       1.2      27      45 ..      88     106 ..      86     110 .. 0.86
   3 ?    1.8   0.0      0.25   2.1e+02       2      20 ..     143     161 ..     142     163 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 1
                 XXXXXXXXXXXXXX--- CS
    PF08590.5 26 AyrrGdkaaAkeLseeg 42
                  + rG   +A++L +++
  MMETSP1325-20131115|12810_1 45 CRARGALDEAEKLYRQA 61
                 45555555555555544 PP

  == domain 2    score: 9.0 bits;  conditional E-value: 0.0015
                  XXXXXXXXXXXXX------ CS
    PF08590.5  27 yrrGdkaaAkeLseegkkh 45 
                  y+rGdk++Ak L++++ + 
  MMETSP1325-20131115|12810_1  88 YQRGDKEQAKLLLRRALAI 106
                  9************998665 PP

  == domain 3    score: 1.8 bits;  conditional E-value: 0.25
                  XXXXXXXXXXXXXXXXXXX CS
    PF08590.5   2 YerlRkeAdehgkkraelf 20 
                  Ye+ R+eA e+ k++   f
  MMETSP1325-20131115|12810_1 143 YEQRRQEAVELLKRSVAIF 161
                  99********999887766 PP

>> PF04212.13  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0055       4.7       4      35 ..      34      65 ..      32      67 .. 0.83
   2 ?    3.9   0.1     0.051        44       3      18 ..      94     109 ..      92     175 .. 0.79

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0055
                 HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
   PF04212.13  4 kAlelikkAveaDeagkyeeAlelYkeAlelL 35
                 +A+ l + A ++   g ++eA +lY++A+e++
  MMETSP1325-20131115|12810_1 34 RAVTLNNLAQTCRARGALDEAEKLYRQAVEIW 65
                 5667777777788899*************985 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.051
                  HHHHHHHHHHHHHHHT CS
   PF04212.13   3 skAlelikkAveaDea 18 
                  ++A+ l+++A+ +Dea
  MMETSP1325-20131115|12810_1  94 EQAKLLLRRALAIDEA 109
                  6899999999999986 PP

>> PF13812.1  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       8.9   7.6e+03      14      24 ..       6      16 ..       4      21 .. 0.78
   2 ?    8.7   0.1    0.0024       2.1       1      26 [.      35      60 ..      35      62 .. 0.94
   3 ?   -0.3   0.0       1.9   1.6e+03      14      26 ..      90     102 ..      85     102 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.4 bits;  conditional E-value: 8.9
    PF13812.1 14 sgrpeaAlall 24
                 +g+ ++A++l 
  MMETSP1325-20131115|12810_1  6 RGNLKEAERLD 16
                 89999999875 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.0024
    PF13812.1  1 vetyntlitalaksgrpeaAlallee 26
                 ++t+n l+  +  +g  ++A++l+++
  MMETSP1325-20131115|12810_1 35 AVTLNNLAQTCRARGALDEAEKLYRQ 60
                 589********************986 PP

  == domain 3    score: -0.3 bits;  conditional E-value: 1.9
    PF13812.1  14 sgrpeaAlallee 26 
                  +g+ e+A  ll++
  MMETSP1325-20131115|12810_1  90 RGDKEQAKLLLRR 102
                  89*****999985 PP

>> PF13174.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1     0.033        29       5      28 ..      40      63 ..      40      65 .. 0.85
   2 ?    4.5   0.1     0.061        52      10      27 ..      88     104 ..      82     106 .. 0.76
   3 ?    0.8   0.0      0.91   7.8e+02      11      25 ..     143     156 ..     138     162 .. 0.82

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.033
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
    PF13174.1  5 klalsyyklgdtdeAlealerlik 28
                 +la+  ++ g  deA +++++ ++
  MMETSP1325-20131115|12810_1 40 NLAQTCRARGALDEAEKLYRQAVE 63
                 5788888877***********986 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.061
                  HHHHHHHHHHHHHHHHHH CS
    PF13174.1  10 yyklgdtdeAlealerli 27 
                  y+++ d+++A+ +l+r +
  MMETSP1325-20131115|12810_1  88 YQRG-DKEQAKLLLRRAL 104
                  5555.*******999987 PP

  == domain 3    score: 0.8 bits;  conditional E-value: 0.91
                  HHHHHHHHHHHHHHH CS
    PF13174.1  11 yklgdtdeAlealer 25 
                  y++ + +eA+e+l+r
  MMETSP1325-20131115|12810_1 143 YEQ-RRQEAVELLKR 156
                  557.8899***9987 PP

>> PF07721.9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.2      0.16   1.4e+02      13      23 ..       5      15 ..       4      18 .. 0.91
   2 ?   10.9   0.2   0.00055      0.47       2      26 .]      36      60 ..      35      60 .. 0.89
   3 ?    2.5   0.0      0.27   2.3e+02       5      25 ..      81     101 ..      77     102 .. 0.77
   4 ?   -2.0   0.0         8   6.8e+03       6      13 ..     124     131 ..     122     131 .. 0.79

  Alignments for each domain:
  == domain 1    score: 3.2 bits;  conditional E-value: 0.16
                 H-------HHH CS
    PF07721.9 13 alGdldeAral 23
                 a+G+l eA++l
  MMETSP1325-20131115|12810_1  5 ARGNLKEAERL 15
                 89*******97 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 0.00055
                 HHH---HHHHHH-------HHHHHT CS
    PF07721.9  2 rallaLArallalGdldeAraller 26
                 ++l +LA+++ a+G ldeA+ l ++
  MMETSP1325-20131115|12810_1 36 VTLNNLAQTCRARGALDEAEKLYRQ 60
                 67889**************988876 PP

  == domain 3    score: 2.5 bits;  conditional E-value: 0.27
                  ---HHHHHH-------HHHHH CS
    PF07721.9   5 laLArallalGdldeAralle 25 
                   +L+   +++Gd ++A  ll+
  MMETSP1325-20131115|12810_1  81 NNLGLIVYQRGDKEQAKLLLR 101
                  577788899******976666 PP

  == domain 4    score: -2.0 bits;  conditional E-value: 8
                  --HHHHHH CS
    PF07721.9   6 aLAralla 13 
                  +LA +l++
  MMETSP1325-20131115|12810_1 124 NLADVLAR 131
                  79999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       412  (0.0301346); expected 273.4 (0.02)
Passed bias filter:                      378  (0.0276477); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                        16  (0.00117028); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.54
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|12820_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 341.02
//
Query:       MMETSP1325-20131115|12823_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|12825_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 440.93
//
Query:       MMETSP1325-20131115|12826_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0023   18.1   0.1     0.0026   18.0   0.0    1.1  1  PF00428.14 60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.9e-07    0.0026       2      49 ..      18      68 ..      17      81 .] 0.79

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 1.9e-07
   PF00428.14  2 ptaadikavlkaagv..eveaerlkllvkalegk.dikeliangsaklaaa 49
                 p+aad+kav++aag   e+++++++  ++ +++k  + ++ia+g++k+ + 
  MMETSP1325-20131115|12826_1 18 PSAADVKAVVEAAGGeaEIDDAAIDKMIADITAKgALGDIIAEGKEKIYSM 68
                 9*************74478899999999999977689*********97633 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       447  (0.0326946); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 373.28
//
Query:       MMETSP1325-20131115|12834_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        93  (0.00680222); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.35s 00:00:00.63 Elapsed: 00:00:00.49
# Mc/sec: 264.09
//
Query:       MMETSP1325-20131115|12836_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.33s 00:00:00.66 Elapsed: 00:00:00.47
# Mc/sec: 560.85
//
Query:       MMETSP1325-20131115|12837_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.042   12.8   0.0      0.056   12.4   0.0    1.1  1  PF10491.4 NLS-binding and DNA-binding and dimerisation domains of Nrf1
       0.51    9.3   4.9         19    4.2   4.8    1.9  2  PF12730.2 ABC-2 family transporter protein
        4.5    6.5   7.5       0.23   10.7   1.4    1.7  2  PF11990.3 Protein of unknown function (DUF3487)


Domain annotation for each model (and alignments):
>> PF10491.4  NLS-binding and DNA-binding and dimerisation domains of Nrf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.2e-05     0.056     152     195 ..      62     105 ..      39     111 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.2e-05
    PF10491.4 152 gwgkestrpvwwpkdlpwanvrsdvrseeekqkvswtkalrkiv 195
                   wg+es   + w +d  w   r + r    k +v w+  +  +v
  MMETSP1325-20131115|12837_1  62 PWGHESFDDNEWKEDPLWCMQRIENRGGASKSHVGWATFISSVV 105
                  6***********************************99988887 PP

>> PF12730.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.039   1.8e+02      14      40 ..      33      61 ..      21      71 .. 0.50
   2 ?    4.2   4.8    0.0041        19      99     152 ..      98     154 ..      95     160 .. 0.78

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.039
    PF12730.2 14 llllilplllallalllfn..vagdteis 40
                 ++++ +++ +a++ +  f+  +++ ++++
  MMETSP1325-20131115|12837_1 33 YIFMSIAVHTAAFLCGVFGitSVRRHNLD 61
                 33333333333333322221133444444 PP

  == domain 2    score: 4.2 bits;  conditional E-value: 0.0041
    PF12730.2  99 vllllslllslvlllisliaglllgg.ggfdls..llleflllllllsllvllllll 152
                  +++++s++++++++l+  iag+ ++g + +++s  ++++++  l++++llv+l+ ++
  MMETSP1325-20131115|12837_1  98 ATFISSVVFFVLSFLLLDIAGYAVHGmTWWKVSkgQVVAYACHLIGFALLVTLFDIS 154
                  679999999999999999999999964455555778889999999999999888554 PP

>> PF11990.3  Protein of unknown function (DUF3487)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       1.1     5e+03      29      34 ..      43      48 ..      32      55 .. 0.38
   2 ?   10.7   1.4   5.1e-05      0.23      19      66 ..      88     135 ..      87     150 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.1
    PF11990.3 29 vaglsl 34
                 +a+l+ 
  MMETSP1325-20131115|12837_1 43 AAFLCG 48
                 222222 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 5.1e-05
    PF11990.3  19 rGltadElgvvaglslalglvvglllalllgtialiptlavlgvilvv 66 
                  +G +++ +g+++++s ++++v+++ll+ ++g+ + ++t   +    vv
  MMETSP1325-20131115|12837_1  88 GGASKSHVGWATFISSVVFFVLSFLLLDIAGYAVHGMTWWKVSKGQVV 135
                  68999**************************99988887666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.32s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 905.29
//
Query:       MMETSP1325-20131115|12835_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   13.0   0.1      0.054   12.7   0.1    1.2  1  PF07477.7 Glycosyl hydrolase family 67 C-terminus


Domain annotation for each model (and alignments):
>> PF07477.7  Glycosyl hydrolase family 67 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1     4e-06     0.054      91     143 ..      54     106 ..      10     143 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4e-06
    PF07477.7  91 yhradkkgiGvdRtktgsgavgqYakevaelyedletcpeelLLwfHhvpyth 143
                     +d  + G  R+++ +  ++q ++   ++  +   cpe+ LL++H ++++ 
  MMETSP1325-20131115|12835_1  54 GRGSDGGAYGSGRADDPTAHISQQHQAELSKALHAVGCPESRLLHYHMLDWQA 106
                  4456777889999988887777666655555556678**************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       496  (0.0362785); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.33s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1040.02
//
Query:       MMETSP1325-20131115|12841_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.099   11.4   0.0       0.11   11.2   0.0    1.1  1  PF01062.16 Bestrophin, RFP-TM, chloride channel


Domain annotation for each model (and alignments):
>> PF01062.16  Bestrophin, RFP-TM, chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.3e-06      0.11     248     286 ..       7      45 ..       2      52 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 8.3e-06
   PF01062.16 248 vtplltvlqfyffvglekvaeeLenPFGeddddlelnal 286
                  v+ l++ ++ ++f+ +e ++ ++e+PF   +     n+l
  MMETSP1325-20131115|12841_1   7 VVLLAMGFIGLVFLSIEDIGVQIEEPFAILPLRNHHNWL 45 
                  67788999*******************876666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 361.90
//
Query:       MMETSP1325-20131115|12849_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.4   10.1   3.9       0.49    9.8   2.7    1.4  1  PF07641.6 Protein of unknown function (DUF1596)


Domain annotation for each model (and alignments):
>> PF07641.6  Protein of unknown function (DUF1596)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.7   3.6e-05      0.49      23      59 ..      12      48 ..       5      69 .. 0.89

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 3.6e-05
    PF07641.6 23 GPtersyGsstsPtkGnfiLPeLhCvPvrPtaainft 59
                 G t r+y s  s +   +  P +h  P  Ptaa++  
  MMETSP1325-20131115|12849_1 12 GRTTRAYTSHCSTAPSMIPSPIIHVSPTGPTAAVQPS 48
                 89*******9999999999**************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 356.90
//
Query:       MMETSP1325-20131115|12845_1  [L=287]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-37  125.4   6.5    1.2e-20   73.2   1.1    2.2  2  PF00575.18 S1 RNA binding domain
     0.0095   15.5   0.1        4.6    6.9   0.0    2.4  2  PF02599.11 Global regulator protein family
  ------ inclusion threshold ------
       0.05   13.4   0.3        1.6    8.6   0.0    2.8  2  PF13509.1  S1 domain
        1.7    8.5   7.3        9.9    6.1   0.2    3.5  4  PF08402.5  TOBE domain


Domain annotation for each model (and alignments):
>> PF00575.18  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   1.1   3.5e-24   1.2e-20       2      74 .]      48     120 ..      47     120 .. 0.97
   2 !   54.8   0.2     2e-18   6.7e-15       6      70 ..     150     214 ..     147     216 .. 0.92

  Alignments for each domain:
  == domain 1    score: 73.2 bits;  conditional E-value: 3.5e-24
                  SSTT-EEE--EEEEETTEEEEE--.--EEEEEGGGS-CCEEEECCCCEETT----EEEEE-EEETT.EEEESS CS
   PF00575.18   2 pekGevvkGtVtsvtkgGafVdlgngvegfipiseissdrvedpeevlkvgdevevkvlkvdkerkriiLsik 74 
                  +e++++++G+V++v+++GafVd g + +g+++ s++s+d ve p+e +kvgd+v v+vl+vd e+++++Ls+k
  MMETSP1325-20131115|12845_1  48 LEIDSTIEGVVKGVSDFGAFVDFGGESDGLVHKSQLSDDFVETPSEFVKVGDTVSVRVLRVDLEKNQVSLSMK 120
                  58899******************************************************************97 PP

  == domain 2    score: 54.8 bits;  conditional E-value: 2e-18
                  -EEE--EEEEETTEEEEE--.--EEEEEGGGS-CCEEEECCCCEETT----EEEEE-EEETT.EE CS
   PF00575.18   6 evvkGtVtsvtkgGafVdlgngvegfipiseissdrvedpeevlkvgdevevkvlkvdkerkrii 70 
                  e v+GtV+ +  +GafV+l+ g++g+++is+++  rve  e v+++gdev v+vl+v++++ ++ 
  MMETSP1325-20131115|12845_1 150 EFVTGTVKTIATYGAFVELEGGASGLVHISQLAAGRVETVESVVSQGDEVQVRVLNVRDGKISLA 214
                  779******************************************************99865544 PP

>> PF02599.11  Global regulator protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0024       8.2      10      33 ..      93     118 ..      90     121 .. 0.86
   2 !    6.9   0.0    0.0014       4.6      15      33 ..     196     214 ..     188     217 .. 0.84

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0024
   PF02599.11  10 EsIvIgddIeitvlevk..ggqVrlG 33 
                  E + +gd + + vl+v+  ++qV l 
  MMETSP1325-20131115|12845_1  93 EFVKVGDTVSVRVLRVDleKNQVSLS 118
                  77899**********99889999886 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0014
   PF02599.11  15 gddIeitvlevkggqVrlG 33 
                  gd++++ vl+v++g++ l+
  MMETSP1325-20131115|12845_1 196 GDEVQVRVLNVRDGKISLA 214
                  9**************9987 PP

>> PF13509.1  S1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00046       1.6       8      46 ..      57     103 ..      52     106 .. 0.73
   2 ?    1.7   0.0     0.062   2.1e+02       4      34 ..     151     181 ..     150     211 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00046
    PF13509.1   8 kVlretefgffLdggengevlLpkkevpee........leiGDevev 46 
                   V+  ++fg+f+d g++ + l +k+++ ++        +++GD+v+v
  MMETSP1325-20131115|12845_1  57 VVKGVSDFGAFVDFGGESDGLVHKSQLSDDfvetpsefVKVGDTVSV 103
                  577789*******7777********7654422223335888888877 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.062
    PF13509.1   4 intLkVlretefgffLdggengevlLpkkev 34 
                  ++t +V+ +  +g+f++ +++   l + +++
  MMETSP1325-20131115|12845_1 151 FVTGTVKTIATYGAFVELEGGASGLVHISQL 181
                  6788999999999999877767777777654 PP

>> PF08402.5  TOBE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.4   8.3e+03      52      62 ..      27      38 ..      20      40 .. 0.63
   2 ?    4.0   0.1     0.013        44      16      67 ..      52     105 ..      41     110 .. 0.66
   3 ?    2.8   0.7      0.03     1e+02      18      65 ..     152     201 ..     140     202 .. 0.57
   4 ?    6.1   0.2    0.0029       9.9      21      49 ..     188     217 ..     176     230 .. 0.80

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 2.4
    PF08402.5 52 sr.dsalapGdt 62
                 ++ d+ +apGd 
  MMETSP1325-20131115|12845_1 27 AAgDDLPAPGDD 38
                 333568899986 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.013
    PF08402.5  16 nglsGtVedveylGsstryvvelaggqlvvvrqsnasr.d.salapGdtVelsw 67 
                   +++G+V+ v  +G+ +++  e +g        ++  +   + +++GdtV +++
  MMETSP1325-20131115|12845_1  52 STIEGVVKGVSDFGAFVDFGGESDGLVHKSQLSDDFVEtPsEFVKVGDTVSVRV 105
                  478899999999999888887777755533333333333345677999999975 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.03
    PF08402.5  18 lsGtVedveylGsstryvvelaggqlvvvrqsnasr.d...salapGdtVel 65 
                  ++GtV+ ++  G+ ++  +e ++  lv ++q +a r +   s +  Gd+V++
  MMETSP1325-20131115|12845_1 152 VTGTVKTIATYGAFVE--LEGGASGLVHISQLAAGRvEtveSVVSQGDEVQV 201
                  6777777777777665..3444445555555555544333344446666665 PP

  == domain 4    score: 6.1 bits;  conditional E-value: 0.0029
    PF08402.5  21 tVedveylGsstryv.velaggqlvvvrqs 49 
                  tVe+v+ +G++++++ + + +g++ ++  +
  MMETSP1325-20131115|12845_1 188 TVESVVSQGDEVQVRvLNVRDGKISLAMSP 217
                  8*************9778888888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 1432.82
//
Query:       MMETSP1325-20131115|12850_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.054   12.5   1.8      0.065   12.2   1.2    1.1  1  PF06705.6 SF-assemblin/beta giardin
      0.096   12.3   0.2        0.1   12.2   0.2    1.0  1  PF10158.4 Tumour suppressor protein


Domain annotation for each model (and alignments):
>> PF06705.6  SF-assemblin/beta giardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.2   9.5e-06     0.065     176     230 ..       4      58 ..       1      58 [. 0.86

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 9.5e-06
    PF06705.6 176 elsalrseihevlgnrklkdeqfknlvldEiaalkealalEreeRkaedDeiVqa 230
                   ++ l+  ++  ++ r+++d +f+  +   ++++ e l+     R++edDei +a
  MMETSP1325-20131115|12850_1   4 TIKRLQETLKHSIASRQVSDKNFEAYTKRQLKGVTEVLENVCVVRENEDDEIENA 58 
                  5667777788999999999999999999999999999999999999999999776 PP

>> PF10158.4  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   1.5e-05       0.1      55     108 ..       2      56 ..       1      58 [. 0.90

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.5e-05
    PF10158.4  55 vkrikevdakietllaelrekqkryasyae.qlskvnelsdqlsriqiiledivp 108
                  v++ik +++ ++  +a+ +   k+++ y + ql++v e+ ++++ ++   +d ++
  MMETSP1325-20131115|12850_1   2 VATIKRLQETLKHSIASRQVSDKNFEAYTKrQLKGVTEVLENVCVVRENEDDEIE 56 
                  689*************************8549************99988877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       679  (0.0496635); expected 273.4 (0.02)
Passed bias filter:                      582  (0.0425688); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|12847_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 392.59
//
Query:       MMETSP1325-20131115|12842_1  [L=781]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-30  104.2   0.0    9.2e-30  103.2   0.0    1.5  1  PF00270.24 DEAD/DEAH box helicase
    1.7e-17   62.9   0.0    3.6e-17   61.8   0.0    1.6  1  PF00271.26 Helicase conserved C-terminal domain
     0.0066   16.1   0.0      0.017   14.8   0.0    1.7  1  PF04851.10 Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.012   15.6   0.1      0.059   13.3   0.1    2.1  1  PF13401.1  AAA domain
      0.015   14.8   0.1      0.053   13.1   0.1    1.9  1  PF13245.1  Part of AAA domain
       0.18   10.1   4.8       0.26    9.6   3.3    1.1  1  PF05667.6  Protein of unknown function (DUF812)
        0.4   10.0   4.7       0.51    9.7   2.5    1.8  1  PF04977.10 Septum formation initiator
       0.77    8.7   4.9        1.3    8.0   3.4    1.3  1  PF04502.8  Family of unknown function (DUF572)
        9.4    4.9   8.3         18    4.0   5.8    1.4  1  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.2   0.0   6.1e-33   9.2e-30       2     168 ..      77     247 ..      76     252 .. 0.82

  Alignments for each domain:
  == domain 1    score: 103.2 bits;  conditional E-value: 6.1e-33
                  HHHHHHHHHHHSS-EEEEEC-TT---HHHHHHHHHHHHHH..HTTSTSEEEEEESSHHHHHHHHHHHHHHTTT.SS.EEEEETTSSBHHHHHHHHH........T..-SEEEEEHHHHHHHHHHCCHHTTTEEEEEECTHHHHHCT.TTHHHHHHHHHHSHHTTTSEEEEEESS-T.H CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x RF
   PF00270.24   2 piQaeaiplilgggdvlvaaeTGsGKTlaflipvlqilletlkkttikkalivaPtreLaeqtlnnlkkfkky.pklrvlliiggvalardqlsvl........dngvdivvgTpgrlddlvstgklnlsqvrllVlDEadrllsq.gfsdqlnqilqilcdgkrlqvivlSATlp.k 168
                  p+Qa++ip++l+g dv+++a+ GsGKT+a++ p l+ + + l   ++ ++li++Ptr+L eq+ +n+ +++ +  klrv+ + +g+  +  ++  +        +       + p++++dl++++k +l ++rllVlDEad+ll+     d l++++     +++ qv ++SATl+ +
  MMETSP1325-20131115|12842_1  77 PVQAASIPALLSGMDVIAEAPAGSGKTAAYACPTLSLVDTDL---NETQVLILVPTRALGEQVGQNVLEMGRHmNKLRVCTLLSGSWCDLSRAPHVcvavcparN---GTCDAAPDKVLDLLERRKVSLDRLRLLVLDEADELLDRqTTADGLKRVIGDF-LPEDAQVAFFSATLTdH 247
                  89**********************************998765...577*************************99*******88877443333333345564322...344466777****************************635566788877764.4678**********944 PP

>> PF00271.26  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.8   0.0   2.4e-20   3.6e-17       5      78 .]     324     406 ..     320     406 .. 0.88

  Alignments for each domain:
  == domain 1    score: 61.8 bits;  conditional E-value: 2.4e-20
                  H----EEEE-TTS-HHHHHHHHHHHHTTTSSEEEESTTC-S---STTESEEEESSSBSSHHH.........HHHH------TT CS
   PF00271.26   5 kkgikvailhgelpqnereeileqfnagkskvlvatnvaerGidlpdvnvVinfdlprsvts.........yiQriGRtgRag 78 
                  + ++ + ++h++ p +  +  l +f++g+ +vl+at++++rGid+++v vVinf+lp+  ++         y+Qr+GR+gR+g
  MMETSP1325-20131115|12842_1 324 QLDFVANRFHADAPGSAYTTELARFKTGQARVLLATDACGRGIDIQSVAVVINFELPTQLENgktcaaperYVQRAGRAGRFG 406
                  66677889999*********************************************666666666666666**********97 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.1e-05     0.017      29      70 ..      93     140 ..      74     152 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.1e-05
   PF04851.10  29 livmaTGtGKTlvaasliarlar......kflflvprkelleqaleef 70 
                  + +++ G+GKT  +a   + l        ++l+lvp+++l eq  ++ 
  MMETSP1325-20131115|12842_1  93 IAEAPAGSGKTAAYACPTLSLVDtdlnetQVLILVPTRALGEQVGQNV 140
                  67899**********7666666666667***************87665 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   3.9e-05     0.059      11     102 ..      96     218 ..      91     240 .. 0.65

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 3.9e-05
    PF13401.1  11 GesGvGKTtllrrlarqldeeaeaae........................karvvfveapastspkellqkllsalglpakg..........................rltteell.ealqealrrrrt.....rlliiDEaqrL..see 102
                  +++G+GKT ++     +l     +++                        + +                                                       r+ t +   +++++ l+rr++     rll++DEa+ L  +++
  MMETSP1325-20131115|12842_1  96 APAGSGKTAAYACPTLSLVDTDLNETqvlilvptralgeqvgqnvlemgrHMNK---------------------------LrvctllsgswcdlsraphvcvavcpaRNGTCDAApDKVLDLLERRKVsldrlRLLVLDEADELldRQT 218
                  789999999999999998765554445666665555555554444444443333...........................234444444444444445555555555566777777***************************755333 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   3.5e-05     0.053       9      61 ..      89     139 ..      80     156 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.5e-05
    PF13245.1   9 gnpllvvtGgPGtGKTttlaaiiaallaarekp.grsvllvaptgraakrlser 61 
                  g  +++  +++G+GKT++ a+    l+++  +    +vl++ pt++  +++ + 
  MMETSP1325-20131115|12842_1  89 GMDVIA-EAPAGSGKTAAYACPTLSLVDT--DLnETQVLILVPTRALGEQVGQN 139
                  555667.9*******************54..455889*********99988554 PP

>> PF05667.6  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.3   0.00017      0.26     390     483 ..     472     565 ..     458     568 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00017
    PF05667.6 390 edaeenvakLqalveasserlleLaqqWeahrkpLidelrelkekarekedetkrkleeikklrekikeleselqtkeelykqLlkeyenasks 483
                  e+a++nv     +v  ss r  +L+   e+ ++ L + l e +e a+  e e+++     + lr k + +e+el++k++ + +L++e e +s++
  MMETSP1325-20131115|12842_1 472 EEAPRNVPPPPPVVTRSSTRTDNLTWADEDEKQKLSELLAEARERAAVAEMEAQEARVSNEALRAKLQHSEEELKAKDARIGELEAEVELLSEQ 565
                  567888888888999**********999**************999999999999999999****************************999886 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.5   0.00034      0.51      20      58 ..     532     569 ..     525     575 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00034
   PF04977.10  20 yqlkqeiaalqaelaklkaeneeLeaevkdLksdedyie 58 
                   +l+++++  ++el++  a++ eLeaev++L s++  ie
  MMETSP1325-20131115|12842_1 532 EALRAKLQHSEEELKAKDARIGELEAEVELL-SEQLEIE 569
                  67999**************************.6766665 PP

>> PF04502.8  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   3.4   0.00087       1.3     110     221 ..     498     650 ..     484     702 .. 0.53

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00087
    PF04502.8 110 aekeaeeqverlekeeeeeeagdamkklEkrtadskremevlerLeeLkelqsrkadvavesmLealrreekkeeeeeeeedeelikslslg...............leseedrrlakdedkedek..................................e 221
                  a++++++++ +l  e +e+ a + m++ E+r++++   ++ + + eeLk++  r  ++++e  L + + e + + + eee +++ + s +++                  eed++ +        +                                   
  MMETSP1325-20131115|12842_1 498 ADEDEKQKLSELLAEARERAAVAEMEAQEARVSNEALRAKLQHSEEELKAKDARIGELEAEVELLSEQLEIELNLRAEEEAEAAATGSGEEEaepilvgkiwcgcsqCTFEEDEEKV--------SevvggehdlvgspplrspstplsrlsadsaewipV 650
                  346666677788899999************************************666666655544433333333333333232222221111111222444444432223333333........133333333444444444444444433333322221 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   5.8     0.012        18      27     118 ..     490     577 ..     484     590 .. 0.83

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.012
    PF10186.4  27 lrlanlkaeketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdleasaqlekrra 118
                  +r+ nl  + e+ k+k++e+l+    e++++a    +e ++ +  +e +r+++++ +ee+++k +ri el+++++ ++++le   +l+++++
  MMETSP1325-20131115|12842_1 490 TRTDNLTWADEDEKQKLSELLA----EARERAAVAEMEAQEARVSNEALRAKLQHSEEELKAKDARIGELEAEVELLSEQLEIELNLRAEEE 577
                  6777888888999999999998....67888888889999999999********************************99995555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (781 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       900  (0.065828); expected 273.4 (0.02)
Passed bias filter:                      450  (0.032914); expected 273.4 (0.02)
Passed Vit filter:                        70  (0.00511995); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.37u 0.32s 00:00:01.69 Elapsed: 00:00:00.69
# Mc/sec: 2712.40
//
Query:       MMETSP1325-20131115|12852_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.58    8.1   9.3       0.65    7.9   6.5    1.0  1  PF03154.10 Atrophin-1 family


Domain annotation for each model (and alignments):
>> PF03154.10  Atrophin-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   6.5   4.8e-05      0.65     577     628 ..      32      79 ..      19      84 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 4.8e-05
   PF03154.10 577 ssklakkreeavekakreaeqkareererekekekerererereaeraakas 628
                  +  lak reea     reae+ka  + e e +     er  +reaer aka 
  MMETSP1325-20131115|12852_1  32 GETLAKSREEAL---AREAEEKANGDGEEEEDTMGALERM-KREAEREAKAK 79 
                  6789******98...59*******9999998887777765.58888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       659  (0.0482007); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.39s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 425.48
//
Query:       MMETSP1325-20131115|12854_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|12855_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-12   45.4   0.1    5.1e-12   45.3   0.0    1.0  1  PF03382.9 Mycoplasma protein of unknown function, DUF285


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   3.7e-16   5.1e-12      29      65 ..       2      38 ..       1      42 [. 0.80

  Alignments for each domain:
  == domain 1    score: 45.3 bits;  conditional E-value: 3.7e-16
    PF03382.9 29 ssmFsgakkfnqdiskWdtsnVtnmsemFsgatsfnq 65
                 s++F++  +fn+dis Wd+s+Vtnm++mF+gatsf+ 
  MMETSP1325-20131115|12855_1  2 SRLFYKRADFNADISGWDVSSVTNMTHMFQGATSFTC 38
                 5678888888888888888888888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 229.85
//
Query:       MMETSP1325-20131115|12857_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.95
# Mc/sec: 148.83
//
Query:       MMETSP1325-20131115|12859_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-05   23.2   0.0      4e-05   22.9   0.0    1.2  1  PF00494.14 Squalene/phytoene synthase


Domain annotation for each model (and alignments):
>> PF00494.14  Squalene/phytoene synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   2.9e-09     4e-05       3      54 ..     100     154 ..      98     157 .] 0.82

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 2.9e-09
   PF00494.14   3 eksksfylaslllppelrealvalYafcRvaDdlvDevs...deskararldewr 54 
                  ++s+sf++++++lp+el  ++  +Y + R++D+++D+++    + ++ + l++++
  MMETSP1325-20131115|12859_1 100 KVSRSFAMVIRQLPRELVLDILIFYIVLRALDTVEDDTTaftRPGEKIMYLNAFH 154
                  78***********************************995554444444555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 767.81
//
Query:       MMETSP1325-20131115|12862_1  [L=455]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-10   40.8   0.0      4e-10   39.6   0.0    1.6  1  PF13417.1  Glutathione S-transferase, N-terminal domain
    1.1e-07   31.6   0.0    2.3e-07   30.6   0.0    1.5  1  PF13409.1  Glutathione S-transferase, N-terminal domain
    0.00035   20.2   0.1    0.00092   18.9   0.1    1.8  1  PF13410.1  Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.035   14.1   0.0       0.14   12.2   0.0    2.0  1  PF02798.15 Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.0   1.2e-13     4e-10       1      69 [.     165     259 ..     165     267 .. 0.72

  Alignments for each domain:
  == domain 1    score: 39.6 bits;  conditional E-value: 1.2e-13
                  EE--TTSHHHHHHHHHHHH---..-..EEE----TTTT.....HHHH..HHH-..TT--SSEEE-.---............EEESHHHHHHHHHH CS
    PF13417.1   1 LygspfSpyarkvrlaLeekgl..p..yelvevtpgkk.....rpel..laln..pkgkvPvLed.dge............vltdSlvIieyLee 69 
                  Ly   ++p+++kvr++L+ekgl  +   ++v+vt +k       + +  ++ n  ++  +P L++ dg+            vl +S+vI+eyL +
  MMETSP1325-20131115|12862_1 165 LYANDTCPFVQKVRIVLQEKGLtgScvERHVDVTGDKSattgfVELYrrAEPNpfRRPAIPLLVHrDGDgegaqrdgaqdlVLIESTVIAEYLVD 259
                  8999******************5534344667766655544544444433335445559****7424445688999999*************954 PP

>> PF13409.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   6.6e-11   2.3e-07       2      67 ..     171     257 ..     170     260 .. 0.71

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 6.6e-11
                  -HHHHHHHHHHHH----EEEEE.EH....TTSHHHHHHHH----........--SEEE.----............EEESHHHHHHHH CS
    PF13409.1   2 cPwahRvlialalkgledeisv.vplepkgfekseellalsprg........tVPvLwdkdgt............vineSseIlryl 67 
                  cP++++v+i+l++kgl+   ++  ++ + + ++   + +l  r          +P+L++ dg             v+ eS++I++yl
  MMETSP1325-20131115|12862_1 171 CPFVQKVRIVLQEKGLTGSCVErHVDVTGDKSATTGFVELYRRAepnpfrrpAIPLLVHRDGDgegaqrdgaqdlVLIESTVIAEYL 257
                  *****************886664344445555555675555555444455668******4444445556666799***********9 PP

>> PF13410.1  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   2.7e-07   0.00092       9      67 ..     314     392 ..     274     394 .. 0.77

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 2.7e-07
                  GGTT-THGGG------SS...........-------HHHHHHHHHHHHHHHHH---..........---TT----HHHH CS
    PF13410.1   9 aqlraaLdaleahLadgp..........fllGdrpslaDialapflvrldaagpgl..........direayPnlrawl 67 
                  + +++aL++l+  L++++           +  +r++la + +ap l+rl + +p l          + + ++P +++w 
  MMETSP1325-20131115|12862_1 314 ESVVRALETLNGWLTHHStaerngdaasSFVCGRFTLAEALVAPALQRLVYLPPLLrpelamdvmsTAKVRFPAVHRWA 392
                  56777788776655533333334444444899********************998788888876666668********7 PP

>> PF02798.15  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     4e-05      0.14       3      75 ..     163     258 ..     161     259 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4e-05
                  EEEESSSC..HHHHHHHHHHHTT-...-EEEEEEGTTCCHCHHHHHHHHCTTT.......S-SSEEEET............TTEEEESHHHHHHHHH CS
   PF02798.15   3 ltlfnhrg..raeslrillaekgv...eyeivrvdfeagegkspewlklnpki.......grvPaledg............dglklteSlAIarYla 75 
                  ltl+      +++++ri+l+ekg+   ++e + vd++ +  ++ +++ l ++        + +P l++             ++l+l eS++Ia+Yl 
  MMETSP1325-20131115|12862_1 163 LTLYANDTcpFVQKVRIVLQEKGLtgsCVERH-VDVTGDKSATTGFVELYRRAepnpfrrPAIPLLVHRdgdgegaqrdgaQDLVLIESTVIAEYLV 258
                  66666666678889999999666522145544.7764444444888888888888889999999999999999999999999*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.33s 00:00:01.06 Elapsed: 00:00:00.48
# Mc/sec: 2271.55
//
Query:       MMETSP1325-20131115|12869_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-06   25.4   1.0    6.7e-06   25.4   0.7    1.0  1  PF01733.13 Nucleoside transporter


Domain annotation for each model (and alignments):
>> PF01733.13  Nucleoside transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.7   4.9e-10   6.7e-06     181     235 ..       3      59 ..       1      74 [. 0.83

  Alignments for each domain:
  == domain 1    score: 25.4 bits;  conditional E-value: 4.9e-10
   PF01733.13 181 fipvllfllfNlfdllGrvlaavimwpdq...dsrllpvlvllRllfiplfllcnakp 235
                  f pv+l+  +N +dl+G++l  + + +     ++r ++v  ++ l+f+plf+++   +
  MMETSP1325-20131115|12869_1   3 F-PVILVFFYNTGDLIGKSLPGWTQTESLslfTPRTIVVPAVVHLAFVPLFFMVAQAT 59 
                  4.4777778****************9987889*********************96554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|12871_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-12   47.2   0.0    1.9e-12   46.8   0.0    1.2  1  PF00249.26 Myb-like DNA-binding domain
    6.1e-07   29.3   0.0    8.3e-07   28.9   0.0    1.2  1  PF13921.1  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> PF00249.26  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   2.8e-16   1.9e-12       2      47 ..      27      70 ..      26      71 .. 0.97

  Alignments for each domain:
  == domain 1    score: 46.8 bits;  conditional E-value: 2.8e-16
                 TSS-HHHHHHHHHHHHHTTS-.HHHHHHHCTTTS-HHHHHHHHHHH CS
   PF00249.26  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                 grWT  E+  ++++ + +G + W++Ia+++g  Rt+ q++s+ qky
  MMETSP1325-20131115|12871_1 27 GRWTSAEHSAFLRGLECYGRK-WARIAEMVG-SRTPDQVRSHAQKY 70
                 9******************99.*********.*************9 PP

>> PF13921.1  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   1.2e-10   8.3e-07       1      43 [.      29      71 ..      29      85 .. 0.90

  Alignments for each domain:
  == domain 1    score: 28.9 bits;  conditional E-value: 1.2e-10
    PF13921.1  1 WtdeEdeiLlklveeygndWseIaeelgrRtplacqdrwknkL 43
                 Wt +E  + l+  e yg++W+ Iae+ g+Rtp++++ + ++  
  MMETSP1325-20131115|12871_1 29 WTSAEHSAFLRGLECYGRKWARIAEMVGSRTPDQVRSHAQKYF 71
                 ***************************99*******9988854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 573.25
//
Query:       MMETSP1325-20131115|12872_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-15   56.4   0.1    6.9e-13   47.8   0.1    2.1  2  PF01344.20 Kelch motif
    1.4e-09   37.5   0.0    6.9e-08   32.2   0.0    2.1  2  PF13964.1  Kelch motif
    1.4e-06   27.9   0.0     0.0013   18.6   0.0    2.2  2  PF07646.10 Kelch motif
    2.4e-06   27.3   1.2      3e-06   27.1   0.1    1.7  2  PF13415.1  Galactose oxidase, central domain
    2.7e-06   26.9   1.2    0.00016   21.2   0.1    2.2  2  PF13418.1  Galactose oxidase, central domain
     0.0011   18.7   0.0       0.04   13.7   0.0    2.2  2  PF13854.1  Kelch motif


Domain annotation for each model (and alignments):
>> PF01344.20  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.1     3e-16   6.9e-13       2      46 ..       1      44 [.       1      45 [. 0.98
   2 !    6.9   0.0    0.0018       4.1       8      22 ..      54      68 ..      51      83 .. 0.83

  Alignments for each domain:
  == domain 1    score: 47.8 bits;  conditional E-value: 3e-16
                 SSCEEEEEETTEEEEE---BSTTS-TTEEEEEETTTTEEEEECCS CS
   PF01344.20  2 rssagvvvldgkiYviGGrdgdtnalnsVerYDpvtntWeklpsm 46
                 r++a+++++dgki v GG++g    l+s e+YDpv++ W+ ++sm
  MMETSP1325-20131115|12872_1  1 RTGASCTAVDGKIVVAGGWSG-AGHLRSAEMYDPVSDAWTSIASM 44
                 899******************.*********************** PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0018
                 EEETTEEEEE---BS CS
   PF01344.20  8 vvldgkiYviGGrdg 22
                  ++dgk+ v GG + 
  MMETSP1325-20131115|12872_1 54 ECVDGKVVVAGGVSV 68
                 589*********875 PP

>> PF13964.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0     3e-11   6.9e-08       2      50 .]       1      48 [.       1      48 [. 0.95
   2 ?    3.4   0.0     0.037        84      10      21 ..      56      67 ..      53      79 .. 0.85

  Alignments for each domain:
  == domain 1    score: 32.2 bits;  conditional E-value: 3e-11
    PF13964.1  2 raghsavsvggkiyifGGytnsgkylndvlvydpetksWeqlpplpvpr 50
                 r+g s+++v+gki+++GG ++   +l++ + ydp ++ W+ ++++  +r
  MMETSP1325-20131115|12872_1  1 RTGASCTAVDGKIVVAGGWSG-AGHLRSAEMYDPVSDAWTSIASMTDAR 48
                 7899*****************.79*********************9776 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.037
    PF13964.1 10 vggkiyifGGyt 21
                 v+gk++++GG +
  MMETSP1325-20131115|12872_1 56 VDGKVVVAGGVS 67
                 89********87 PP

>> PF07646.10  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   5.5e-07    0.0013       2      47 ..       1      43 [.       1      45 [. 0.84
   2 !    7.4   0.0    0.0019       4.3       9      21 ..      55      74 ..      48      82 .. 0.74

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 5.5e-07
   PF07646.10  2 ryghsavvpggkiyvvGGahtdngllsssdlnvldpeknvWeeltp 47
                 r g s++ ++gki+v GG+    g+  +++   +dp +  W+ +  
  MMETSP1325-20131115|12872_1  1 RTGASCTAVDGKIVVAGGW---SGAGHLRSAEMYDPVSDAWTSIAS 43
                 6789***************...888888888889999999988765 PP

  == domain 2    score: 7.4 bits;  conditional E-value: 0.0019
   PF07646.10  9 vpggkiyvvGGa.......h 21
                 +++gk++v GG+       +
  MMETSP1325-20131115|12872_1 55 CVDGKVVVAGGVsvreaeqD 74
                 78*********977766533 PP

>> PF13415.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   1.3e-09     3e-06       2      44 ..      11      51 ..      10      51 .. 0.95
   2 ?   -2.9   0.1       3.5   7.9e+03       2       9 ..      58      65 ..      57      65 .. 0.83

  Alignments for each domain:
  == domain 1    score: 27.1 bits;  conditional E-value: 1.3e-09
    PF13415.1  2 delyvfGGlgddgqtrlndvyvldldtntweeigslPppRagh 44
                 ++++v GG+   g+  l +  ++d++++ w+ i+s+ ++Ra++
  MMETSP1325-20131115|12872_1 11 GKIVVAGGWS--GAGHLRSAEMYDPVSDAWTSIASMTDARAWA 51
                 78********..****************************985 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 3.5
    PF13415.1  2 delyvfGG 9 
                 ++++v GG
  MMETSP1325-20131115|12872_1 58 GKVVVAGG 65
                 68999999 PP

>> PF13418.1  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   7.2e-08   0.00016       2      47 ..       1      44 [.       1      46 [. 0.93
   2 !    4.8   0.0    0.0092        21       1      20 [.      47      65 ..      47      68 .. 0.85

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 7.2e-08
    PF13418.1  2 RaghsavavpdgrlylfGGenedggplnDlyvfDlstntWtrlpsl 47
                 R g+s++av dg++++ GG ++  g l  +  +D+++  Wt ++s+
  MMETSP1325-20131115|12872_1  1 RTGASCTAV-DGKIVVAGGWSGA-GHLRSAEMYDPVSDAWTSIASM 44
                 7899*****.8***********7.5******************998 PP

  == domain 2    score: 4.8 bits;  conditional E-value: 0.0092
    PF13418.1  1 pRaghsavavpdgrlylfGG 20
                 +Ra+++a  v dg++++ GG
  MMETSP1325-20131115|12872_1 47 ARAWAMAECV-DGKVVVAGG 65
                 6888888888.8******** PP

>> PF13854.1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.8e-05      0.04       5      27 ..       1      27 [.       1      43 [. 0.80
   2 ?    3.1   0.0     0.038        86       9      24 ..      52      67 ..      46      76 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.8e-05
    PF13854.1  5 RarhcavvvsgniylyGGksg....nd 27
                 R++++  +v+g+i + GG+sg    ++
  MMETSP1325-20131115|12872_1  1 RTGASCTAVDGKIVVAGGWSGaghlRS 27
                 8999999*************7444444 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.038
    PF13854.1  9 cavvvsgniylyGGks 24
                  a  v+g++ + GG+s
  MMETSP1325-20131115|12872_1 52 MAECVDGKVVVAGGVS 67
                 4545799*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       653  (0.0477618); expected 273.4 (0.02)
Passed bias filter:                      377  (0.0275746); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 515.44
//
Query:       MMETSP1325-20131115|12875_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.033   13.7   0.0      0.062   12.8   0.0    1.5  1  PF07011.6 Protein of unknown function (DUF1313)


Domain annotation for each model (and alignments):
>> PF07011.6  Protein of unknown function (DUF1313)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.5e-06     0.062      15      48 ..      39      74 ..      33     105 .. 0.67

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.5e-06
    PF07011.6 15 sfkqvqsvLdqNrlLiqeineNhe..srvadnlsrN 48
                 s++++q +L +N  L+qei+  h+  + ++    rN
  MMETSP1325-20131115|12875_1 39 SLERAQAILYRNACLVQEIERQHDliAAAPQTPHRN 74
                 899*****************9996333344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       374  (0.0273552); expected 273.4 (0.02)
Passed bias filter:                      326  (0.0238444); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 549.75
//
Query:       MMETSP1325-20131115|12860_1  [L=260]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-31  106.9   2.1    4.7e-31  106.1   0.6    1.9  2  PF00900.15 Ribosomal family S4e
    2.6e-19   68.6   6.7    3.4e-19   68.3   4.0    1.7  2  PF08071.7  RS4NT (NUC023) domain
    1.1e-08   34.2   0.0    2.9e-08   32.8   0.0    1.8  2  PF01479.20 S4 domain
     0.0075   15.7   0.1     0.0075   15.7   0.1    2.7  3  PF00467.24 KOW motif


Domain annotation for each model (and alignments):
>> PF00900.15  Ribosomal family S4e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   0.6   1.4e-34   4.7e-31       2      77 .]      95     170 ..      94     170 .. 0.98
   2 ?   -1.0   0.0      0.36   1.2e+03      30      56 ..     219     245 ..     201     255 .. 0.67

  Alignments for each domain:
  == domain 1    score: 106.1 bits;  conditional E-value: 1.4e-34
                  G--EEEEEE-----EEEEE--TTGGGEEEEEEEEEEEE--SEEEEEETTTEEEEC--TT-----EEEEETTTTEEE CS
   PF00900.15   2 tgehyRvlydekgrlvlvkIseeeAkyKlckiknkttvkggkiqlnlhdGrnilvddpkyktgdslvidlpeqkiv 77 
                  +g+++R+lyd+kgr+vl++I++eeA+yKlc+++++++ k++++ l++hdGr+i+++dp +k++d++++d++++ki+
  MMETSP1325-20131115|12860_1  95 SGDTFRLLYDTKGRFVLHRIKDEEASYKLCRVQKVQVTKKKIPFLVTHDGRTIRYPDPLIKVNDTVKVDVATNKII 170
                  689***********************************************************************95 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.36
                  EEEEEEEEEE--SEEEEEETTTEEEEC CS
   PF00900.15  30 lckiknkttvkggkiqlnlhdGrnilv 56 
                    + +n  ++ ++k q+ l  G+ i  
  MMETSP1325-20131115|12860_1 219 ATRTQNIFVIGEKKSQVSLPKGKGIKL 245
                  566777778888888888877776655 PP

>> PF08071.7  RS4NT (NUC023) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3   4.0   9.8e-23   3.4e-19       1      38 []       3      40 ..       3      40 .. 0.98
   2 ?   -3.4   0.0       2.5   8.6e+03      23      29 ..     216     222 ..     215     223 .. 0.81

  Alignments for each domain:
  == domain 1    score: 68.3 bits;  conditional E-value: 9.8e-23
                 -------BGGGS-GGGT-------B----------SSS CS
    PF08071.7  1 kGpkkHLKRlaAPkhWpldkkegkfavkPspGPHklee 38
                 +GpkkHLKRl+APk W+l k+ g++a++Ps+GPHkl+e
  MMETSP1325-20131115|12860_1  3 RGPKKHLKRLNAPKAWMLGKMDGIWAPRPSTGPHKLRE 40
                 7***********************************97 PP

  == domain 2    score: -3.4 bits;  conditional E-value: 2.5
                  --B---- CS
    PF08071.7  23 gkfavkP 29 
                  ++fa+++
  MMETSP1325-20131115|12860_1 216 NVFATRT 222
                  79***97 PP

>> PF01479.20  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   8.6e-12   2.9e-08       3      48 .]      44      90 ..      42      90 .. 0.94
   2 ?   -3.5   0.0         2   6.7e+03      41      47 ..     153     159 ..     143     162 .. 0.54

  Alignments for each domain:
  == domain 1    score: 32.8 bits;  conditional E-value: 8.6e-12
                 HHHHH.HHHH--SSHHHHHHHHHTT-EEE---B---TT-BE-TTSEE CS
   PF01479.20  3 LDkvL.arlglassrseArqlIehGhVrVNGkvvkdpsyrVkpgDvi 48
                 L  +L  rl++a + +e++ +++++ V V+Gkv++d sy+ +++Dv+
  MMETSP1325-20131115|12860_1 44 LVLILrNRLKYALTMQECKSICMERLVEVDGKVRTDESYPAGFMDVV 90
                 6777889**************************************97 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 2
                  BE-TTSE CS
   PF01479.20  41 rVkpgDv 47 
                   +k++D 
  MMETSP1325-20131115|12860_1 153 LIKVNDT 159
                  4455554 PP

>> PF00467.24  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.56   1.9e+03      16      28 ..     123     135 ..     122     139 .. 0.75
   2 ?   -2.3   0.2         1   3.5e+03       1       7 [.     156     162 ..     156     164 .. 0.86
   3 !   15.7   0.1   2.2e-06    0.0075       2      26 ..     178     202 ..     177     211 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 0.56
                  EEEEEEEETTTCE CS
   PF00467.24  16 pGkvvevdrskar 28 
                   ++v +v   k++
  MMETSP1325-20131115|12860_1 123 LCRVQKVQVTKKK 135
                  6889888887754 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1
                  TTBEEEE CS
   PF00467.24   1 kGdyVrv 7  
                  ++d+V+v
  MMETSP1325-20131115|12860_1 156 VNDTVKV 162
                  6899999 PP

  == domain 3    score: 15.7 bits;  conditional E-value: 2.2e-06
                  TBEEEE-----TT-EEEEEEEETTT CS
   PF00467.24   2 GdyVrvisGpfkGrpGkvvevdrsk 26 
                  G+ ++v  G++ Gr+G++ +++++ 
  MMETSP1325-20131115|12860_1 178 GNLCMVSKGRNTGRVGTIGHIEKHP 202
                  899********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.39s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 1221.67
//
Query:       MMETSP1325-20131115|12864_1  [L=255]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-15   53.8   1.0    1.6e-14   53.1   0.7    1.3  1  PF00957.16 Synaptobrevin
    2.2e-11   43.0   0.0    3.8e-11   42.2   0.0    1.5  1  PF13774.1  Regulated-SNARE-like domain


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.7   2.3e-18   1.6e-14       3      58 ..     194     249 ..     192     253 .. 0.96

  Alignments for each domain:
  == domain 1    score: 53.1 bits;  conditional E-value: 2.3e-18
   PF00957.16   3 dklskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklk 58 
                  dk+ +i+++++ +++++++ id++lergekld+Lv+++++L+++++qF kqa+k +
  MMETSP1325-20131115|12864_1 194 DKILRIQNDLNSTQQVLTQTIDNLLERGEKLDDLVQRSDELSATSKQFYKQAKKTN 249
                  899*************************************************9975 PP

>> PF13774.1  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   5.6e-15   3.8e-11       2      63 ..      96     159 ..      95     194 .. 0.87

  Alignments for each domain:
  == domain 1    score: 42.2 bits;  conditional E-value: 5.6e-15
    PF13774.1   2 akqilkklppnspqklsyesgn...yvfhylv.edglvylvvadksyprrlafafLeeikreFlst 63 
                  +k+++k++  ++ q+ ++e +    y +h +v  dgl+    adk+yp r+afa+L+e+ ++F ++
  MMETSP1325-20131115|12864_1  96 SKIVVKRIA-PG-QRITVEVEGmaeYQVHTYVrTDGLAGTLTADKEYPTRVAFAVLNELLDDFAAE 159
                  799******.89.8****9553344*******9******************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       750  (0.0548566); expected 273.4 (0.02)
Passed bias filter:                      585  (0.0427882); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.41s 00:00:01.03 Elapsed: 00:00:00.60
# Mc/sec: 1018.45
//
Query:       MMETSP1325-20131115|12879_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.34s 00:00:00.64 Elapsed: 00:00:00.51
# Mc/sec: 234.94
//
Query:       MMETSP1325-20131115|12877_1  [L=372]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-31  107.8   0.1    8.5e-31  107.1   0.0    1.3  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1   0.0   6.2e-35   8.5e-31       3     154 ..      52     230 ..      50     232 .. 0.79

  Alignments for each domain:
  == domain 1    score: 107.1 bits;  conditional E-value: 6.2e-35
                  XXXXXXXXXXXX.XXXXXX.---........-TTTTT--------TTT--------------.....----S--TT--........STT-----.--S-TT.THHHH---HHHHHHHHTT---------------.................---------..-----------STTT----TTTTT------ CS
   PF00504.16   3 aeldgslpgdlg.fDplglskdp........tlkrlreaEliHGRvAMlavlGalvpelltk.....lsaaskfaelpa.......waeaggls.lptllalqillligflelareqelkapesegsekraypGg.................lgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvvq 154
                  ++l g+l++ ++ fDpl+l++++        t+++lr++E++HGR+AM a++G++++ ++++     +   ++    p+       w      + +p ++ +qi+++i+fle++ e+   +     +++ ++ G                  ++ dp+gl+  k+ee+ka+  + Ei+nGRlAM++++gf+++
  MMETSP1325-20131115|12877_1  52 ETLAGELNPVVKfFDPLNLAEQEfwgdsneaTIAFLRQSEIKHGRIAMFAFVGYCAQANGIHwpwamT---KAGDMFPSdltppeqW------DaIPEAAKWQIFMVIAFLEFWDESTGDH-----YMRGGKIGAfaplagpdsplphpvpfNLYDPFGLSakKSEEAKARGLKIEINNGRLAMLGIFGFLAE 230
                  678999999999*******98779999*******************************9999554331...2222222232232233......149999**************97776654.....34444444466666666777777777679*****9999**************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 1819.28
//
Query:       MMETSP1325-20131115|12886_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      150  (0.0109713); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|12887_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 372.77
//
Query:       MMETSP1325-20131115|12888_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 326.78
//
Query:       MMETSP1325-20131115|12892_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 322.59
//
Query:       MMETSP1325-20131115|12899_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-24   85.5   3.5    2.4e-24   85.2   2.4    1.0  1  PF01984.15 Double-stranded DNA-binding domain
  ------ inclusion threshold ------
      0.086   12.6   4.1        5.7    6.8   0.7    3.0  3  PF09501.5  Probable sporulation protein (Bac_small_yrzI)
       0.12   12.0   2.2       0.84    9.2   1.4    1.8  1  PF06413.6  Neugrin
       0.14   11.9   1.0       0.21   11.3   0.3    1.6  1  PF13037.1  Domain of unknown function (DUF3898)


Domain annotation for each model (and alignments):
>> PF01984.15  Double-stranded DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   2.4   7.1e-28   2.4e-24      20     107 .]      17     101 ..       4     101 .. 0.91

  Alignments for each domain:
  == domain 1    score: 85.2 bits;  conditional E-value: 7.1e-28
                  -HHHHHHHHHHHHHHHHCCCCCB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SS-B-HHHHHHHHHHHTTT--S-SS-S--X CS
   PF01984.15  20 eeqqeeqkqeeeeqkeaiLrqiLepeAreRLsrirlvkperAeavenqliqlaqsGqirkkiteeqlkelLeqiaeqkrkktkikikR 107
                    ++ ++++++eeq e++++qiL+peA eRL+++++vk++++++v++q+iq+a+sGq+++ki++eq+k +L++ a ++    k++ikR
  MMETSP1325-20131115|12899_1  17 GGASAAEEAQMEEQMEQMMTQILTPEAMERLKTLAVVKKDKVRQVQMQIIQMARSGQLKQKIDDEQIKAMLNEGAGNQP---KVTIKR 101
                  55667788899*****************************************************************999...677766 PP

>> PF09501.5  Probable sporulation protein (Bac_small_yrzI)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.7    0.0017       5.7      19      35 ..      22      38 ..      19      43 .. 0.88
   2 ?   -0.2   0.1      0.26   8.7e+02      22      31 ..      74      83 ..      71      89 .. 0.66
   3 ?    4.9   0.0    0.0063        22      10      21 ..      97     108 ..      96     119 .] 0.84

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0017
    PF09501.5 19 eaElereqqiekimdei 35
                 ++E ++e+q e++m +i
  MMETSP1325-20131115|12899_1 22 AEEAQMEEQMEQMMTQI 38
                 6899**********987 PP

  == domain 2    score: -0.2 bits;  conditional E-value: 0.26
    PF09501.5 22 lereqqieki 31
                 l++++ +e+i
  MMETSP1325-20131115|12899_1 74 LKQKIDDEQI 83
                 5677777766 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.0063
    PF09501.5  10 iTIqKrklSeaE 21 
                  +TI++r++ ++E
  MMETSP1325-20131115|12899_1  97 VTIKRRTYFDDE 108
                  8******98777 PP

>> PF06413.6  Neugrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.4   0.00025      0.84     137     220 ..      25     110 ..      17     111 .. 0.62

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00025
    PF06413.6 137 tkatlkkktrkkqvqvleeakslvsateekGeqreavsdkeeeeeewdgal...lsdeeLeelkaseigksskvvqrGreFFDsnGn 220
                   +++++ ++   q+ ++e  ++  ++++   +++  + + +  + + +g+l   + de++  + ++++g+++kv  + r +FD +G+
  MMETSP1325-20131115|12899_1  25 AQMEEQMEQMMTQILTPEA-MERLKTLAVVKKDKVRQVQMQIIQMARSGQLkqkIDDEQIKAMLNEGAGNQPKVTIKRRTYFDDEGE 110
                  4445555556666666665.55555555444444444455555666667661114566666666788999**************996 PP

>> PF13037.1  Domain of unknown function (DUF3898)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   6.1e-05      0.21       7      42 ..      54      89 ..      42      97 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 6.1e-05
    PF13037.1  7 eteqvveasaqiveqaPevelklkldeievkallad 42
                 ++++v + + qi++ a   +lk k+d+ ++ka+l +
  MMETSP1325-20131115|12899_1 54 KKDKVRQVQMQIIQMARSGQLKQKIDDEQIKAMLNE 89
                 67899999*************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1241  (0.0907695); expected 273.4 (0.02)
Passed bias filter:                      724  (0.0529549); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.38s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 528.09
//
Query:       MMETSP1325-20131115|12898_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-45  151.1   0.1    1.2e-44  150.8   0.0    1.1  1  PF01597.14 Glycine cleavage H-protein
     0.0025   17.2   0.2     0.0055   16.1   0.1    1.6  1  PF00364.17 Biotin-requiring enzyme


Domain annotation for each model (and alignments):
>> PF01597.14  Glycine cleavage H-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.8   0.0   1.7e-48   1.2e-44       1     120 [.      38     156 ..      38     158 .. 0.98

  Alignments for each domain:
  == domain 1    score: 150.8 bits;  conditional E-value: 1.7e-48
                  -EE-TTS-EE-----.---B---HHHHHH---EEEE----------TT-B---EEESS-EE--B-S----EEEE-GGGTT----TTT-TT-----EEE--S-GGGGGGSB-HHHHHHHHH CS
   PF01597.14   1 lyytkehewvkveedgvatvGitdfaqeelgdlvfvelpevgtevekgeslaavEsvKaasevyapvsGevvevNekledepeliNkdpyeegWlaklklknleeleeLlsaeeyekllk 120
                  +yy+++he++kv++d v t+Git++a+++lgd+vfv+lp+vg e ++ges+++vEsvKaas+vyapv Ge+vevNe+l+d+p+++N++  +egW ak+k++++++l+ L+ +e+y++++ 
  MMETSP1325-20131115|12898_1  38 MYYAESHEYIKVDGD-VGTMGITAHAADALGDIVFVDLPDVGSEFDQGESFGSVESVKAASDVYAPVAGEIVEVNEELDDNPGVVNESADGEGWFAKIKISDASQLDGLMGEEAYAEFCA 156
                  59************9.*****************************************************************************************************986 PP

>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   8.1e-07    0.0055      24      63 ..      77     116 ..      69     123 .. 0.92

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 8.1e-07
                  ------CTSEEEEEESSSSEEEEEBS----EEEESS-TT- CS
   PF00364.17  24 vGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGd 63 
                  vG++  +g++   ve+ K+  ++ ap+aG ++e+  + +d
  MMETSP1325-20131115|12898_1  77 VGSEFDQGESFGSVESVKAASDVYAPVAGEIVEVNEELDD 116
                  89********************************988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 798.79
//
Query:       MMETSP1325-20131115|12908_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       367  (0.0268432); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.45s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|12903_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-05   23.2   0.0      8e-05   22.5   0.0    1.3  1  PF00970.19 Oxidoreductase FAD-binding domain
    7.7e-05   22.1   0.0       0.28   10.4   0.0    2.1  2  PF00667.15 FAD binding domain


Domain annotation for each model (and alignments):
>> PF00970.19  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   1.2e-08     8e-05      46      97 ..     116     184 ..     106     186 .. 0.87

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 1.2e-08
                  EEEEEEE.SSST...T.EE-EEEEEEE--.............----HHHHHHC-----EEEEE-EE--E CS
   PF00970.19  46 evvRaYspassp...s.ekgelellvkvv.............pgGkmsqyldelkvgdtlelkGPlGkf 97 
                  + vR Ys+ass    + + ++ +l+v++              + G  s+yl  +++g+ ++++GP Gk+
  MMETSP1325-20131115|12903_1 116 NSVRLYSIASSRygdDmTGNTATLCVRRAtywcpelgaedpaKKGVCSNYLCDAEPGTEVKMTGPSGKV 184
                  579******99855333445699*****99*************************************97 PP

>> PF00667.15  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   4.1e-05      0.28       3      53 ..      57     106 ..      55     112 .. 0.90
   2 !    9.6   0.0   7.1e-05      0.49     180     219 .]     119     165 ..     116     165 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 4.1e-05
   PF00667.15   3 fdakkpflakvlknreLtkpsseRsvihleldisdsglkYqtGdhlgvyps 53 
                  ++ k pf+ k+++++++  p+++ ++  + +d ++ ++ Y +G ++gv+p+
  MMETSP1325-20131115|12903_1  57 YKTKSPFVGKITSVKRIVGPKATGETCDIVIDHQG-KMPYWEGQSFGVIPP 106
                  67899**********************99999877.7************96 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 7.1e-05
   PF00667.15 180 RyYSISSss...kvepnevhltvvvveyet....gegrirkGvassy 219
                  R YSI+Ss+   +++ n+  l+v   +y      +e +++kGv+s+y
  MMETSP1325-20131115|12903_1 119 RLYSIASSRygdDMTGNTATLCVRRATYWCpelgAEDPAKKGVCSNY 165
                  9*******833356777777777766663366888999********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.44s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 953.75
//
Query:       MMETSP1325-20131115|12910_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 344.20
//
Query:       MMETSP1325-20131115|12913_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0045   17.2   0.2      0.009   16.3   0.1    1.6  1  PF07536.9 HWE histidine kinase


Domain annotation for each model (and alignments):
>> PF07536.9  HWE histidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   6.6e-07     0.009      21      51 ..      39      69 ..      21      72 .. 0.86

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 6.6e-07
    PF07536.9 21 lrsaesleefaeklsgRLqALsrahdlltre 51
                 +r++ s+ ++ + l +R++AL++ah ll++ 
  MMETSP1325-20131115|12913_1 39 MREKFSSTAVGNLLIDRIAALAEAHGLLSTV 69
                 67777888888999*************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.46s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 323.95
//
Query:       MMETSP1325-20131115|12909_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   14.0   7.5      0.034   14.0   5.2    3.0  3  PF10518.4 TAT (twin-arginine translocation) pathway signal sequence


Domain annotation for each model (and alignments):
>> PF10518.4  TAT (twin-arginine translocation) pathway signal sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   2.1     0.023   3.1e+02       7      16 ..      10      19 ..       5      26 .. 0.56
   2 ?   14.0   5.2   2.5e-06     0.034       3      25 ..      35      57 ..      33      58 .. 0.90
   3 ?   -3.6   2.0         1   1.4e+04      10      18 ..     137     140 ..     133     144 .] 0.38

  Alignments for each domain:
  == domain 1    score: 1.6 bits;  conditional E-value: 0.023
    PF10518.4  7 fLkggaaaaA 16
                 fL +++ aaA
  MMETSP1325-20131115|12909_1 10 FLAAAGSAAA 19
                 3333333333 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 2.5e-06
    PF10518.4  3 sRRqfLkggaaaaAaaalggala 25
                  RR fL++g aaaAaa++ +a++
  MMETSP1325-20131115|12909_1 35 ARRGFLRFGSAAAAAAVGVAAAP 57
                 6***************9999986 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 1
    PF10518.4  10 ggaaaaAaa 18 
                  ++a     a
  MMETSP1325-20131115|12909_1 137 AAA-----A 140
                  222.....2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       868  (0.0634874); expected 273.4 (0.02)
Passed bias filter:                      497  (0.0363517); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 676.62
//
Query:       MMETSP1325-20131115|12914_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0027   16.5   6.7     0.0028   16.4   4.7    1.1  1  PF02166.11 Androgen receptor
  ------ inclusion threshold ------
       0.23    9.6  15.7       0.23    9.6  10.9    1.0  1  PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
       0.32   10.1  13.1       0.36    9.9   9.1    1.1  1  PF09309.5  FCP1, C-terminal
        0.4    8.9   6.1       0.42    8.9   4.2    1.0  1  PF05783.6  Dynein light intermediate chain (DLIC)
       0.57   10.0   4.0       0.64    9.9   2.7    1.0  1  PF04699.9  ARP2/3 complex 16 kDa subunit (p16-Arc)
       0.62    9.7   5.3       0.79    9.3   3.7    1.1  1  PF00540.13 gag gene protein p17 (matrix protein)
       0.97    7.1  15.5          1    7.0  10.7    1.0  1  PF04147.7  Nop14-like family
       0.99    8.7  10.5          1    8.7   7.2    1.1  1  PF11861.3  Domain of unknown function (DUF3381)
        1.1    8.5  21.3        1.5    8.1  14.8    1.1  1  PF10500.4  Nuclear RNA-splicing-associated protein
        1.3    9.1  11.5        1.5    8.9   8.0    1.1  1  PF09806.4  Cyclin-dependent kinase 2-associated protein
        1.9    7.8  10.5        2.2    7.6   7.3    1.0  1  PF12026.3  Domain of unknown function (DUF3513)
          2    7.5  12.8        2.2    7.4   8.8    1.0  1  PF04652.11 Vta1 like
        2.7    6.9  11.7          3    6.7   8.1    1.1  1  PF05477.6  Surfeit locus protein 2 (SURF2)
        2.8    7.0  16.5          3    6.9  11.5    1.0  1  PF05285.7  SDA1
        3.1    6.2   8.4        3.5    6.1   5.8    1.0  1  PF02455.11 Hexon-associated protein (IIIa)
        3.2    7.4   6.5        3.6    7.2   4.5    1.1  1  PF09174.5  Maf1 regulator
        4.5    6.6  10.4        5.5    6.3   7.2    1.1  1  PF04921.9  XAP5, circadian clock regulator
        4.8    6.6   8.2        5.4    6.4   5.7    1.1  1  PF04720.7  Protein of unknown function (DUF506)
        6.4    6.3  12.5        7.7    6.1   8.6    1.1  1  PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
        6.9    6.6  24.4        8.6    6.3  16.9    1.1  1  PF05501.6  Domain of unknown function (DUF755)
        7.3    7.2  18.0         10    6.8  12.5    1.3  1  PF10471.4  Anaphase-promoting complex APC subunit 1
        8.6    5.4  12.7        9.7    5.2   8.8    1.1  1  PF03353.10 Ras-mediated vulval-induction antagonist
        8.8    4.1  17.8        9.3    4.0  12.3    1.0  1  PF02724.9  CDC45-like protein
        9.2    4.2  13.8        9.2    4.2   9.5    1.0  1  PF09726.4  Transmembrane protein


Domain annotation for each model (and alignments):
>> PF02166.11  Androgen receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   4.7     5e-06    0.0028     161     197 ..      20      56 ..       9      72 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 5e-06
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF02166.11 161 eagtmqllqqqqqeavsegsssgrareaagaptsskd 197
                  e + mq  qqqqq+ + e +ss+r r+a  a +ss  
  MMETSP1325-20131115|12914_1  20 EEAYMQQQQQQQQQQLHEATSSSRRRKANSASSSSSP 56 
                  6678*************************99998864 PP

>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  10.9    0.0004      0.23     351     419 ..       4      69 ..       1      78 [] 0.48

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.0004
                  X..XXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXX.XXXXXXXXXXXXXXXXXX.XXXXXXXXXX CS
    PF05793.7 351 kdkkdSddeedsddsDideedsvslvkakK..kkekkkeekvdsnessagnsrparpspeq.kdskskrkaa 419
                  +d+++S      +d+D ++ed   + +++   +++++ +e + s+   ++ns +++ sp + ++s+s rk +
  MMETSP1325-20131115|12914_1   4 TDEDES------EDEDEESEDEEEAYMQQQqqQQQQQLHEATSSSRRRKANSASSSSSPRSsSKSSSSRKRT 69 
                  444444......333333333333333333003333445666666666677766666654414455666654 PP

>> PF09309.5  FCP1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   9.1   0.00063      0.36     159     214 ..       5      66 ..       2      78 .] 0.39

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00063
                  XXXXXXXXXXX-....--...---------......-------------------------- CS
    PF09309.5 159 gsddsdsekkkkedkeee...eeeaaqqrkqka...PeerresdvrapsssersaaggrvPr 214
                  + d+s+ e+ ++ed+ee    +++++qq++ ++    + rr+ +   +sss rs++ + + r
  MMETSP1325-20131115|12914_1   5 DEDESEDEDEESEDEEEAymqQQQQQQQQQLHEatsSSRRRKANSASSSSSPRSSSKSSSSR 66 
                  44555555555444444311033333333322211022233333444444445554444333 PP

>> PF05783.6  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.2   0.00073      0.42     345     399 ..      14      68 ..       7      78 .] 0.46

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.00073
    PF05783.6 345 vqaedeqvflvkqqsllakqpatptrgvespar.aqsgsprttnrsapatvasvsp 399
                   ++ede    ++qq++ ++q    + ++ s  r a+s+s+ ++ rs++++ +s + 
  MMETSP1325-20131115|12914_1  14 EESEDEEEAYMQQQQQQQQQQ-LHEATSSSRRRkANSASSSSSPRSSSKSSSSRKR 68 
                  455666555555555543333.3333333333313333444445555555555444 PP

>> PF04699.9  ARP2/3 complex 16 kDa subunit (p16-Arc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.7    0.0011      0.64      12      81 ..       5      74 ..       2      77 .. 0.76

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0011
    PF04699.9 12 deessvnldaetllpelpevssaevaqkakqvrsllrsgdaeeALklvLenaplgadd.avKeaalktvle 81
                 de++s+++d+e +  e  +  +++++q+++q++++ +s +  +A ++  +++p ++++ +   + + t++e
  MMETSP1325-20131115|12914_1  5 DEDESEDEDEESED-EEEAYMQQQQQQQQQQLHEATSSSRRRKANSASSSSSPRSSSKsSSSRKRTGTIIE 74
                 78888777777554.5556778888999999*******999999999999999888775655566666665 PP

>> PF00540.13  gag gene protein p17 (matrix protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.7    0.0014      0.79      90     135 ..      13      57 ..      10      62 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.0014
   PF00540.13  90 eikvkdtkealekvkreqnkskkktevtsgsaqqkaaaggtaasag 135
                  + + +d +ea  + +++q++++ + e+ts+s+++ka+++ +++s  
  MMETSP1325-20131115|12914_1  13 DEESEDEEEAYMQQQQQQQQQQLH-EATSSSRRRKANSASSSSSPR 57 
                  567789999998877777776666.888999999988886666654 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  10.7    0.0018         1     348     410 ..       5      62 ..       1      75 [. 0.29

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0018
    PF04147.7 348 edeeeddddeeeeeedvdedeeeedeedeesddeeeeeeeeeaseeeaeakkkkkktkkkkks 410
                  +++e++d+dee  +ed++e   +++++++++   e ++++     ++a++++++ ++++  ks
  MMETSP1325-20131115|12914_1   5 DEDESEDEDEE--SEDEEEAYMQQQQQQQQQQLHEATSSSRR---RKANSASSSSSPRSSSKS 62 
                  22222333322..22222222222222222222222222222...222222222222222222 PP

>> PF11861.3  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   7.2    0.0018         1     104     144 ..       7      46 ..       1      68 [. 0.42

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0018
    PF11861.3 104 eeeeeeeeveekdeeeqideelkellekelakekreerren 144
                  +e e+e+e++e++ee  ++++++ +++++l+++  ++rr++
  MMETSP1325-20131115|12914_1   7 DESEDEDEESEDEEEAYMQQQQQ-QQQQQLHEATSSSRRRK 46 
                  22222222223333333332222.33333333222222222 PP

>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  14.8    0.0026       1.5      35      86 ..      16      67 ..       2      72 .. 0.28

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0026
    PF10500.4 35 srkksksske......srkkrekkkkkrrersssssssssssssssssssskseekrk 86
                 s+ ++++  +       ++ +e     rr+++ s sssss  ss s+s     +++rk
  MMETSP1325-20131115|12914_1 16 SEDEEEAYMQqqqqqqQQQLHEATSSSRRRKANSASSSSSPRSS-SKS-----SSSRK 67
                 11111111111111112222222333333343333322222222.222.....22222 PP

>> PF09806.4  Cyclin-dependent kinase 2-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   8.0    0.0026       1.5      27      75 ..      19      69 ..       9      75 .. 0.63

  Alignments for each domain:
  == domain 1    score: 8.9 bits;  conditional E-value: 0.0026
    PF09806.4 27 kne.sqkqreerekqaqvesnhrgrssvsgsagssssnssa.lrarsskqs 75
                 ++e +++q++++++q   e+++ +r   + sa+ssss+ s+ ++++s+k +
  MMETSP1325-20131115|12914_1 19 EEEaYMQQQQQQQQQQLHEATSSSRRRKANSASSSSSPRSSsKSSSSRKRT 69
                 333577777777666666677777777777777777765540445555554 PP

>> PF12026.3  Domain of unknown function (DUF3513)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.3    0.0038       2.2      27      88 ..       7      67 ..       2      73 .. 0.53

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0038
    PF12026.3 27 eeferqqkellekeniekq.kqkkqferleqeveksvekdltkwspadstskksaslseedrq 88
                 +e e + +e  ++e++  q +q++q ++l++  ++s++++ +++ +++s++ +s+s s+++r+
  MMETSP1325-20131115|12914_1  7 DESEDEDEESEDEEEAYMQqQQQQQQQQLHEATSSSRRRK-ANSASSSSSP-RSSSKSSSSRK 67
                 5556666666555555444367777777766666665555.3333333333.34444544444 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   8.8    0.0038       2.2     145     204 ..       3      64 ..       1      77 [. 0.41

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0038
                  XXXXXXXXXXXXXXXX.....................................XXXXXXXXX CS
   PF04652.11 145 gedpnpgppideeeeeeaesveeipdeqe..aqesldssslpgeassasaspksaeessesl 204
                  g+d+ +++++dee e+e+e   +++++q+  +  +++sss +++a+sas+s ++ ++s+ s 
  MMETSP1325-20131115|12914_1   3 GTDEDESEDEDEESEDEEEAYMQQQQQQQqqQLHEATSSSRRRKANSASSSSSPRSSSKSSS 64 
                  56666666666666664443333333333222222333333333333332222222222222 PP

>> PF05477.6  Surfeit locus protein 2 (SURF2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   8.1    0.0053         3     188     243 ..       5      60 ..       1      65 [. 0.74

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0053
    PF05477.6 188 eqdtdeeddFetddedemeveseekeqkrskkqseslkkkfkkahkkkkkkksssv 243
                  ++d+ e++d e++de+e  +++++++q+++ ++ +s++++ k ++  + ++ +ss 
  MMETSP1325-20131115|12914_1   5 DEDESEDEDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRRKANSASSSSSPRSSS 60 
                  45556778888888888888888888888888888888888888877777666655 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  11.5    0.0053         3     122     179 ..       6      62 ..       1      74 [. 0.28

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0053
    PF05285.7 122 esdeeeessDsedeeeeseeeeeeeesekkkkeesdeekseeeeeeaaeeeeeeakee 179
                  e++ e+e+++sedeee  +++++++++++ ++++s ++ ++++ ++++++++ +++++
  MMETSP1325-20131115|12914_1   6 EDESEDEDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRRKAN-SASSSSSPRSSSKS 62 
                  1112223333333333222222222222222222221111111.11122222222222 PP

>> PF02455.11  Hexon-associated protein (IIIa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.8    0.0061       3.5     338     394 ..      10      67 ..       3      77 .. 0.46

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0061
   PF02455.11 338 flwddvdseaeaellkkeaeeeeeesevapepsvaepss..apslsessevlrsaldgr 394
                   + d+ ++++e++++++++++++++ + a+++s+++ ++   +s s  s++++s++ ++
  MMETSP1325-20131115|12914_1  10 EDEDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRRKANsaSSSSSPRSSSKSSSS-RK 67 
                  33344444666677776666666665555444444433311222333333333322.22 PP

>> PF09174.5  Maf1 regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   4.5    0.0064       3.6      17      76 ..      19      74 ..       4      76 .. 0.48

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0064
    PF09174.5 17 dkklyksiekeleelkssslssseskslspnslsssaenvspfgplsekssrktlayLia 76
                 +++ y + ++++++++    ++   +s    +++s++++ sp ++ +++ssrk++  +i+
  MMETSP1325-20131115|12914_1 19 EEEAYMQQQQQQQQQQ--LHEAT--SSSRRRKANSASSSSSPRSSSKSSSSRKRTGTIIE 74
                 2222222222222222..22222..12223333444444488888888888888877776 PP

>> PF04921.9  XAP5, circadian clock regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   7.2    0.0097       5.5      15      62 ..       5      52 ..       2      72 .. 0.38

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0097
    PF04921.9 15 edeeeeeeeeeeeekeeeekeeeeteeenknkkdkkkkkkkkigknps 62
                 +++e e+e+ee+e++ee+  ++++++++++ ++++++++++k    +s
  MMETSP1325-20131115|12914_1  5 DEDESEDEDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRRKANSASS 52
                 334443433444444444333333333333333333333333222222 PP

>> PF04720.7  Protein of unknown function (DUF506)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.7    0.0094       5.4      24      83 ..       7      60 ..       1      75 [. 0.36

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0094
    PF04720.7 24 sgdessdeedeessssednkevseelkkllestsveererrlleakvakaveeasklvkk 83
                 +++e++dee+e ++++  +++ +++ ++l e+ts + r+      k+++a + +s  +++
  MMETSP1325-20131115|12914_1  7 DESEDEDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRR------KANSASSSSSPRSSS 60
                 222222222222233333344444445555555444444......333333322222222 PP

>> PF05320.7  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   8.6     0.013       7.7       9      64 ..       6      62 ..       2      77 .. 0.39

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.013
    PF05320.7  9 dyesdddeeeeyeeeeedeedaeslessdvsslkqsdykvesaseeieda.essskq 64
                 ++es+d++ee+ +eee   ++++++++++++++++s+ + ++ s + + + +sssk+
  MMETSP1325-20131115|12914_1  6 EDESEDEDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRRKANSASSSSSpRSSSKS 62
                 334444444344443333444444444555554444443333222222222222222 PP

>> PF05501.6  Domain of unknown function (DUF755)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  16.9     0.015       8.6      70     122 ..      17      65 ..       6      69 .. 0.40

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.015
    PF05501.6  70 keqkkssqthkkkkkksrnvssrsakkksakkrkksssSSssssssssssseS 122
                  +++++++ +++++++   +++ + a++ s++++  +s SSsss +sss+ss+S
  MMETSP1325-20131115|12914_1  17 EDEEEAYMQQQQQQQ---QQQLHEATSSSRRRK-ANSASSSSSPRSSSKSSSS 65 
                  333333333333222...223345555555555.3333333333333333333 PP

>> PF10471.4  Anaphase-promoting complex APC subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  12.5     0.018        10      17      75 ..      14      68 ..       4      73 .. 0.56

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.018
                 HHHCTT----------------.................-------------------- CS
    PF10471.4 17 eeyederkeqklqqeqkaqqkseeassssdesqtssstdspndeskplaqdkarrvrsr 75
                 ee ede +   +qq+q++qq+     ++++ s+ + +++s++ +s+p  ++k +++r+r
  MMETSP1325-20131115|12914_1 14 EESEDEEEAYMQQQQQQQQQQL----HEATSSSRRRKANSASSSSSPRSSSKSSSSRKR 68
                 4556777777777777777777....444444444444444444444444444444443 PP

>> PF03353.10  Ras-mediated vulval-induction antagonist
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   8.8     0.017       9.7     188     243 ..      12      62 ..       2      77 .. 0.30

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.017
   PF03353.10 188 eeesnlsrpeavkqsskneqapktqqqpdlsassesaniksastaresqpaskrte 243
                  e e++ ++ ea+ q+++++q+++ ++  ++s++ ++++ +s+s++r+s     ++ 
  MMETSP1325-20131115|12914_1  12 EDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRRKANSASSSSSPRSS-----SKS 62 
                  122222222222222222222222222222222222222222222222.....111 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0  12.3     0.016       9.3     140     200 ..       6      66 ..       1      75 [. 0.31

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.016
    PF02724.9 140 dseddeeeeessasekrksesdedeeddddeededeeqrkrsnesslakslrrrrrreree 200
                  ++e+++e+ees+++e+   ++++++++++ +e  +  +r++ n+ s++ s r + ++  ++
  MMETSP1325-20131115|12914_1   6 EDESEDEDEESEDEEEAYMQQQQQQQQQQLHEATSSSRRRKANSASSSSSPRSSSKSSSSR 66 
                  2222222222222222222222222233332333333333333333333333333332222 PP

>> PF09726.4  Transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   9.5     0.016       9.2     317     373 ..      10      67 ..       1      77 [. 0.42

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.016
    PF09726.4 317 saeelalkkdsnsssaeeksaksks.sksaktskrsksnsspkshksaagsvssssvk 373
                  + e+ +   ++++  ++++++++++ ++++++s+r k+ns ++s +  ++s+ssss k
  MMETSP1325-20131115|12914_1  10 EDEDEESEDEEEAYMQQQQQQQQQQlHEATSSSRRRKANSASSSSSPRSSSKSSSSRK 67 
                  2222332333333333333333333033333444455555555555544444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      2765  (0.202238); expected 273.4 (0.02)
Passed bias filter:                     1509  (0.110372); expected 273.4 (0.02)
Passed Vit filter:                       326  (0.0238444); expected 13.7 (0.001)
Passed Fwd filter:                        64  (0.0046811); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.68u 0.46s 00:00:01.14 Elapsed: 00:00:00.60
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|12923_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0074   15.2   8.5       0.12   11.4   5.9    2.5  1  PF02416.11 mttA/Hcf106 family
  ------ inclusion threshold ------
      0.081   12.1   0.5        1.3    8.2   0.0    2.3  2  PF11157.3  Protein of unknown function (DUF2937)


Domain annotation for each model (and alignments):
>> PF02416.11  mttA/Hcf106 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   5.9   1.7e-05      0.12       1      45 [.      89     133 ..      89     225 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.7e-05
                  ------HHHHHHHHHH----STTT-------HHHHHHHHHHHHH- CS
   PF02416.11   1 lgapelliIlvValllFGpkkLPEvaraLGktLreFkkavkelee 45 
                  lgape+++I++V   + Gp+ L+  a++LG    e kk   e ++
  MMETSP1325-20131115|12923_1  89 LGAPEIVVIVAVFGFVVGPENLAKYAKSLGGQVGELKKVPLEFQD 133
                  69****************************999988887666666 PP

>> PF11157.3  Protein of unknown function (DUF2937)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00019       1.3      10      48 ..      95     133 ..      92     170 .. 0.83
   2 ?    1.9   0.1     0.016   1.1e+02      45      83 ..     175     212 ..     164     215 .. 0.68

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00019
    PF11157.3  10 lfaaglllgsQvPeFidqYgqrLeGhldelkrsvaefqa 48 
                  ++++++++++  Pe   +Y ++L+G++ elk++  efq+
  MMETSP1325-20131115|12923_1  95 VVIVAVFGFVVGPENLAKYAKSLGGQVGELKKVPLEFQD 133
                  56778888888899*****************99888886 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.016
    PF11157.3  45 efqatAkaffggdlealiahyrqssdpvvraraesmqal 83 
                  ef + + ++ +   ++l+  +++ ++ vv++++++++++
  MMETSP1325-20131115|12923_1 175 EFTKGVRESAQEANKELVGGLQNANE-VVADGRQQVKQI 212
                  55555555555556788888866666.999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.52
# Mc/sec: 1055.32
//
Query:       MMETSP1325-20131115|12931_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      164  (0.0119953); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|12938_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   11.0   1.4       0.12   11.1   1.0    1.0  1  PF02166.11 Androgen receptor
       0.44   10.6   9.3        0.1   12.7   3.0    2.1  2  PF13900.1  Putative binding domain


Domain annotation for each model (and alignments):
>> PF02166.11  Androgen receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.0   1.7e-05      0.12     337     378 ..      24      72 ..       2      74 .] 0.66

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 1.7e-05
                  XXXXXX.XXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXX CS
   PF02166.11 337 dyynfp.lalagpppppppphpharikle......npldygsawaaaaa 378
                  ++ +fp la   pppp +pp ph  + l       n  d  saw+  +a
  MMETSP1325-20131115|12938_1  24 NHADFPcLASLQPPPPHLPPFPHVPVILHahalqaNKRDDSSAWSINSA 72 
                  4456774677789999999999987766422222378899999987766 PP

>> PF13900.1  Putative binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.3     0.056   3.8e+02      23      50 ..       4      30 ..       1      31 [. 0.65
   2 ?   12.7   3.0   1.5e-05       0.1      14      32 ..      31      49 ..      28      56 .. 0.90

  Alignments for each domain:
  == domain 1    score: 1.2 bits;  conditional E-value: 0.056
    PF13900.1 23 rfkrfsclslpsswdyrhhpprlanFvf 50
                   ++f  lsl+ s     h  + a F +
  MMETSP1325-20131115|12938_1  4 TIPPFASLSLLVSQSLNTHSNH-ADFPC 30
                 5667888888888776666665.66655 PP

  == domain 2    score: 12.7 bits;  conditional E-value: 1.5e-05
    PF13900.1 14 LgSLQpppPrfkrfsclsl 32
                 L SLQpppP++++f++ ++
  MMETSP1325-20131115|12938_1 31 LASLQPPPPHLPPFPHVPV 49
                 88*************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 334.59
//
Query:       MMETSP1325-20131115|12946_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-15   54.1   1.1      1e-14   53.7   0.8    1.2  1  PF00364.17 Biotin-requiring enzyme


Domain annotation for each model (and alignments):
>> PF00364.17  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.8   7.6e-19     1e-14       3      57 ..      72     126 .]      70     126 .] 0.97

  Alignments for each domain:
  == domain 1    score: 53.7 bits;  conditional E-value: 7.6e-19
                  ES-S----EEEE--ECCESS-------CTSEEEEEESSSSEEEEEBS----EEEE CS
   PF00364.17   3 iksPmiGesvkegtvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkei 57 
                  +++P +G s++egt+ e+ +++G+ V+ ++vla++e++K+++++ a++aGv++e+
  MMETSP1325-20131115|12946_1  72 MEVPNMGDSISEGTILEWQKSPGEVVAVDDVLAVIETDKVTVDVRAQHAGVLTEV 126
                  789*************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      311  (0.0227472); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.51
# Mc/sec: 592.04
//
Query:       MMETSP1325-20131115|12953_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-10   38.3   0.3    6.8e-10   37.9   0.2    1.3  1  PF09851.4 Short C-terminal domain
    1.2e-05   24.8   0.1    1.3e-05   24.8   0.0    1.0  1  PF05120.7 Gas vesicle protein G
     0.0031   17.9   0.1     0.0031   17.9   0.0    1.1  1  PF06464.6 DMAP1-binding Domain
  ------ inclusion threshold ------
      0.027   14.1   0.0       0.03   13.9   0.0    1.2  1  PF08044.6 Domain of unknown function (DUF1707)
      0.079   12.3   0.2       0.27   10.6   0.0    1.9  2  PF13713.1 Transcription factor BRX N-terminal domain


Domain annotation for each model (and alignments):
>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.2   2.5e-13   6.8e-10       2      29 ..       4      31 ..       3      33 .. 0.94

  Alignments for each domain:
  == domain 1    score: 37.9 bits;  conditional E-value: 2.5e-13
    PF09851.4  2 adaLekLkeLyarGeIteEEFeakKkkL 29
                 a++L+ Lke ya+G+I+eEE+  +K+++
  MMETSP1325-20131115|12953_1  4 ASQLADLKEKYASGAISEEEYTSQKERI 31
                 78************************98 PP

>> PF05120.7  Gas vesicle protein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   4.7e-09   1.3e-05      32      67 ..       2      37 ..       1      43 [. 0.90

  Alignments for each domain:
  == domain 1    score: 24.8 bits;  conditional E-value: 4.7e-09
    PF05120.7 32 nlrkeLaeLqleleaGeIseeeFdrrEeeLLdrlea 67
                 nl  +La+L+ ++ +G Iseee+  + e++ ++++a
  MMETSP1325-20131115|12953_1  2 NLASQLADLKEKYASGAISEEEYTSQKERITNQMKA 37
                 8999*************************9988874 PP

>> PF06464.6  DMAP1-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.1e-06    0.0031       9      39 ..       3      33 ..       1      42 [. 0.90

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.1e-06
    PF06464.6  9 vrerLaeLeldlseGdiTeKgyekkklkLLr 39
                 + ++La+L + + +G i+e++y  +k ++ +
  MMETSP1325-20131115|12953_1  3 LASQLADLKEKYASGAISEEEYTSQKERITN 33
                 5689**********************99875 PP

>> PF08044.6  Domain of unknown function (DUF1707)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.1e-05      0.03      13      37 ..       8      32 ..       4      38 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.1e-05
    PF08044.6 13 dlLrealaeGrLtleEydeRleaay 37
                 + L e +a G +++eEy++  e+++
  MMETSP1325-20131115|12953_1  8 ADLKEKYASGAISEEEYTSQKERIT 32
                 689***************9988876 PP

>> PF13713.1  Transcription factor BRX N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   9.9e-05      0.27      17      34 ..       3      21 ..       2      28 .. 0.87
   2 ?   -0.5   0.0      0.28   7.7e+02      18      23 ..      32      37 ..      31      37 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 9.9e-05
    PF13713.1 17 LTaQLKdMaeKL.sgayrh 34
                 L++QL d++eK  sga ++
  MMETSP1325-20131115|12953_1  3 LASQLADLKEKYaSGAISE 21
                 99**********9**9884 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 0.28
    PF13713.1 18 TaQLKd 23
                 T+Q+K+
  MMETSP1325-20131115|12953_1 32 TNQMKA 37
                 99*995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      449  (0.0328408); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 219.67
//
Query:       MMETSP1325-20131115|12951_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-22   75.9  22.9    2.7e-09   36.4   0.3    5.9  7  PF00400.27 WD domain, G-beta repeat
    0.00031   20.4   1.6     0.0094   15.5   0.0    3.6  5  PF08662.6  Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
      0.011   14.8   0.1      0.024   13.7   0.0    1.5  1  PF12768.2  Cortical protein marker for cell polarity
      0.023   14.1   0.0         11    5.5   0.0    2.7  2  PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
      0.028   12.1   0.7        1.9    6.0   0.2    3.0  3  PF04762.7  IKI3 family
      0.053   13.0   0.4        2.9    7.5   0.0    3.0  2  PF07676.7  WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.1   7.1e+03      11      23 ..      11      23 ..      11      30 .. 0.77
   2 !   23.1   0.4   1.8e-08   4.2e-05       1      38 [.      48      85 ..      48      86 .. 0.95
   3 !    8.3   0.0   0.00083       1.9      16      31 ..     107     122 ..     101     126 .. 0.88
   4 !   36.4   0.3   1.2e-12   2.7e-09       3      39 .]     140     176 ..     138     176 .. 0.90
   5 !   19.2   0.8   3.2e-07   0.00073      12      37 ..     210     235 ..     204     236 .. 0.92
   6 ?   -3.4   0.1       4.2   9.6e+03      17      33 ..     258     273 ..     256     274 .. 0.63
   7 ?    1.2   0.0      0.15   3.4e+02      10      39 .]     338     370 ..     333     370 .. 0.76

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 3.1
                 SSSEEEEEEESSS CS
   PF00400.27 11 tspVtcvafspdg 23
                 t+++t+ a++ d+
  MMETSP1325-20131115|12951_1 11 TDGITAHAWNADR 23
                 6789999999885 PP

  == domain 2    score: 23.1 bits;  conditional E-value: 1.8e-08
                 TEEEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEE CS
   PF00400.27  1 geckatlrgHtspVtcvafspdgpllasgSrDgtirlW 38
                 + +k +l++H  +++ ++++p   +++++ +D++  +W
  MMETSP1325-20131115|12951_1 48 WRQKFKLTEHDLTISGIDWHPVTGMIVTCAHDRNAFVW 85
                 567999******************************** PP

  == domain 3    score: 8.3 bits;  conditional E-value: 0.00083
                  EEEEESSSTEEEEEET CS
   PF00400.27  16 cvafspdgpllasgSr 31 
                  ++++spdg+ +a +S 
  MMETSP1325-20131115|12951_1 107 DCKWSPDGRKFAVASG 122
                  79***********995 PP

  == domain 4    score: 36.4 bits;  conditional E-value: 1.2e-12
                  EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27   3 ckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39 
                   k + + H+s+V cva++p+++l+a+gS+D ++rl++
  MMETSP1325-20131115|12951_1 140 SKMIKKPHKSTVLCVAWHPNSQLIATGSSDFKCRLFS 176
                  5667788***************************986 PP

  == domain 5    score: 19.2 bits;  conditional E-value: 3.2e-07
                  SSEEEEEEESSSTEEEEEETTSEEEE CS
   PF00400.27  12 spVtcvafspdgpllasgSrDgtirl 37 
                  ++V cv++sp+g++la g +D+++++
  MMETSP1325-20131115|12951_1 210 GWVHCVDWSPSGNVLAFGAHDSSLHV 235
                  8*********************9987 PP

  == domain 6    score: -3.4 bits;  conditional E-value: 4.2
                  EEEESSSTEEEEEETTS CS
   PF00400.27  17 vafspdgpllasgSrDg 33 
                  ++f  d + ++ g++D+
  MMETSP1325-20131115|12951_1 258 IKFISD-TSILGGGHDC 273
                  566666.5666777776 PP

  == domain 7    score: 1.2 bits;  conditional E-value: 0.15
                  SSSSEEEEEEESS...STEEEEEETTSEEEEEE CS
   PF00400.27  10 HtspVtcvafspd...gpllasgSrDgtirlWd 39 
                  H+spVt +    +   ++ + +   Dg i +W+
  MMETSP1325-20131115|12951_1 338 HQSPVTFMQQLNPastCSEFSTTALDGRIAVWK 370
                  67777766666667778888899999***9996 PP

>> PF08662.6  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.49   1.1e+03      62      78 ..      14      30 ..       3      78 .. 0.53
   2 ?   -2.3   0.0       1.2   2.8e+03     145     162 ..      60      77 ..      47      88 .. 0.69
   3 !   15.5   0.0   4.1e-06    0.0094      58     118 ..     101     166 ..      93     174 .. 0.82
   4 ?    0.9   0.0      0.12   2.8e+02      58      75 ..     208     225 ..     198     262 .. 0.81
   5 ?   -2.4   0.0       1.3   2.9e+03      56      78 ..     324     346 ..     304     374 .. 0.62

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.49
    PF08662.6 62 ihdvaWspkskefaviy 78
                 i + aW+ +++e+a+  
  MMETSP1325-20131115|12951_1 14 ITAHAWNADRTELALSP 30
                 66666666666665432 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 1.2
    PF08662.6 145 natlvewspdgryvlTat 162
                    + ++w+p    ++T+ 
  MMETSP1325-20131115|12951_1  60 TISGIDWHPVTGMIVTCA 77 
                  346788888888887765 PP

  == domain 3    score: 15.5 bits;  conditional E-value: 4.1e-06
    PF08662.6  58 kegpihdvaWspkskefaviyGkmpakislfdlk.....vnvisklkekkrNtifwspqgrlvlla 118
                   e   +d +Wsp++++fav  G     +  ++ +      ++i+k +++   ++ w+p+ +l++++
  MMETSP1325-20131115|12951_1 101 IEYAAIDCKWSPDGRKFAVASGAKCVPVCHYEEEnswwvSKMIKKPHKSTVLCVAWHPNSQLIATG 166
                  444579*************************996677756666777777778899*******9876 PP

  == domain 4    score: 0.9 bits;  conditional E-value: 0.12
    PF08662.6  58 kegpihdvaWspkskefa 75 
                   +g +h+v Wsp+++ +a
  MMETSP1325-20131115|12951_1 208 ANGWVHCVDWSPSGNVLA 225
                  567788888888887554 PP

  == domain 5    score: -2.4 bits;  conditional E-value: 1.3
    PF08662.6  56 lkkegpihdvaWspkskefaviy 78 
                   + +  ++d +W+++++ ++ ++
  MMETSP1325-20131115|12951_1 324 TQSKEAMNDNSWQKHQSPVTFMQ 346
                  34444455555655555555444 PP

>> PF12768.2  Cortical protein marker for cell polarity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0     1e-05     0.024       6      57 ..     116     169 ..     114     187 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1e-05
    PF12768.2   6 sFesagsLsCpglClydiessqWsspgnn..isGevtslkfassnklliaGnlt 57 
                  +F  a+  +C  +C y+ e+s W s   +   + +v  + +  +++l+++G+  
  MMETSP1325-20131115|12951_1 116 KFAVASGAKCVPVCHYEEENSWWVSKMIKkpHKSTVLCVAWHPNSQLIATGSSD 169
                  57777777***************98776678********************855 PP

>> PF12894.2  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.005        11       9      32 ..     146     169 ..     141     174 .. 0.88
   2 ?    5.5   0.0    0.0047        11      14      37 ..     212     235 ..     201     236 .. 0.87

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.005
    PF12894.2   9 nlparvkfiswcPtmDLiAlatek 32 
                    +++v +++w P   LiA+++++
  MMETSP1325-20131115|12951_1 146 PHKSTVLCVAWHPNSQLIATGSSD 169
                  5678899**************987 PP

  == domain 2    score: 5.5 bits;  conditional E-value: 0.0047
    PF12894.2  14 vkfiswcPtmDLiAlatekgelal 37 
                  v +++w+P+ + +A++  + +l +
  MMETSP1325-20131115|12951_1 212 VHCVDWSPSGNVLAFGAHDSSLHV 235
                  889************999988865 PP

>> PF04762.7  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.2   0.00083       1.9     115     160 ..       7      51 ..       2     165 .. 0.73
   2 ?    2.0   0.0     0.013        30     307     379 ..     106     177 ..      94     190 .. 0.66
   3 ?    0.6   0.0     0.037        84     256     283 ..     210     237 ..     204     238 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.00083
    PF04762.7 115 ivgsidsGieaaawspDeellalvtgeekvllmtrdfepiaEvsld 160
                  iv ++d Gi+a aw++D   lal  +++++++ ++   p++E + +
  MMETSP1325-20131115|12951_1   7 IVPTTD-GITAHAWNADRTELALSPNNNELIIFENCQAPMSEWRQK 51 
                  565655.**************************9999999997755 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.013
    PF04762.7 307 esLaWnsdSevLavsledr...vqlwttgNyhWYLKqelrfsesegvaevkWdpekpltllvltesgkveivdfal 379
                  ++ +W+ d+   av    +   v  +  +N  W+  + ++ ++++ v  v W+p+++l   ++t s+ ++++ f  
  MMETSP1325-20131115|12951_1 106 IDCKWSPDGRKFAVASGAKcvpVCHYEEENS-WWVSKMIKKPHKSTVLCVAWHPNSQL---IATGSSDFKCRLFSA 177
                  5678999999999966555555666666666.66666777788888888999998876...333335555555554 PP

  == domain 3    score: 0.6 bits;  conditional E-value: 0.037
    PF04762.7 256 gleeaLaWkPsGslIAstqresdkldvv 283
                  g  +++ W PsG+++A  +++s+ + v 
  MMETSP1325-20131115|12951_1 210 GWVHCVDWSPSGNVLAFGAHDSSLHVVT 237
                  6678999999999999887766665555 PP

>> PF07676.7  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0013       2.9      16      27 ..     110     121 ..     105     123 .. 0.86
   2 ?    2.1   0.0     0.063   1.4e+02      15      25 ..     216     226 ..     206     227 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0013
                  E-----EEEEEE CS
    PF07676.7  16 wSPDGkkivFtS 27 
                  wSPDG+k++ +S
  MMETSP1325-20131115|12951_1 110 WSPDGRKFAVAS 121
                  *******98665 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.063
                  EE-----EEEE CS
    PF07676.7  15 awSPDGkkivF 25 
                   wSP G+ ++F
  MMETSP1325-20131115|12951_1 216 DWSPSGNVLAF 226
                  6********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.80u 0.40s 00:00:01.20 Elapsed: 00:00:00.53
# Mc/sec: 1953.26
//
Query:       MMETSP1325-20131115|12968_1  [L=117]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.1e-09   35.7   0.0    9.4e-09   35.4   0.0    1.1  1  PF05721.8 Phytanoyl-CoA dioxygenase (PhyH)
  ------ inclusion threshold ------
      0.022   15.1   0.0      0.036   14.4   0.0    1.4  1  PF13640.1 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF05721.8  Phytanoyl-CoA dioxygenase (PhyH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   1.4e-12   9.4e-09      89     198 ..      19     116 ..       4     117 .] 0.79

  Alignments for each domain:
  == domain 1    score: 35.4 bits;  conditional E-value: 1.4e-12
                  EEEEE..E---S-----E.EEE-GGGTS-EE----EE-EEEESS-B-S----EEEE---------.......................-EEE----.............. CS
    PF05721.8  89 lqsmyqdifkqpkiGgevqpwHqDstflptdpeesvvgvwialedateenGclrfiPGSHkweegplrrrlpeddteaeddeakkedeeeavpvevkaGdavlfhgrllH 198
                  l++++   + +p++G     wHqD++  p+   + ++  w+ ++d +++ G+  ++ GSHk+  +  ++++   d e++ d ++++++ e+ p   kaG+ ++++ r +H
  MMETSP1325-20131115|12968_1  19 LSTDL--LMVNPNSGF---KWHQDNQNGPVL-FDDALRWWVTMDDTPADYGAPVYLKGSHKN--KSVKNDAVFVDIESG-DLVNYPEQLEFRP---KAGEMIVWDARSIH 116
                  45555..777786554...99********77.599***************************..555666666666666.7788888888887...79999999999998 PP

>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   5.3e-06     0.036       4      81 ..      24     116 ..      21     117 .] 0.61

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 5.3e-06
    PF13640.1   4 nrygpggflspHvDnse................sssrrltlllylndpeweeeGGelelypsdr..............segvakevedeevvpkpgrlvlFksdrslH 81 
                   +++p+ ++++H Dn+                 + + ++ + +yl                  +              s++  +  e+ e +pk+g++++++  rs+H
  MMETSP1325-20131115|12968_1  24 LMVNPNSGFKWHQDNQNgpvlfddalrwwvtmdDTPADYGAPVYLKGSH--------------KnksvkndavfvdieSGDLVNYPEQLEFRPKAGEMIVWDA-RSIH 116
                  6778999********88*9999866666666655555555555555444..............33444422222222133333333334444**********9.9999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      229  (0.0167496); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 584.11
//
Query:       MMETSP1325-20131115|12967_1  [L=30]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.37s 00:00:00.65 Elapsed: 00:00:00.46
# Mc/sec: 156.28
//
Query:       MMETSP1325-20131115|12974_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-30  104.6   1.5    2.1e-30  104.4   1.0    1.1  1  PF01221.13 Dynein light chain type 1


Domain annotation for each model (and alignments):
>> PF01221.13  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.4   1.0   1.5e-34   2.1e-30       8      88 ..      17      97 ..      10      98 .] 0.93

  Alignments for each domain:
  == domain 1    score: 104.4 bits;  conditional E-value: 1.5e-34
                 EEETTS-HHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHH-S-EEEE-------EEES--SEEEEEE----EEEEEE- CS
   PF01221.13  8 vkaadmseemqeeaielaaealekfeeekeiAkhiKkefDkkygptWhcivGksFGsyvthekktfiYfyigklaillfkt 88
                 v ++d + em+++a ++aaea+ekf+eek i++ iK  fD kygptWhcivG+ F ++vthe+k+fi+fyigk+ai+l+k+
  MMETSP1325-20131115|12974_1 17 VCDMDEHGEMKADAHTVAAEAIEKFTEEKAISTSIKSFFDAKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKA 97
                 556677778***********************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.49
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|12977_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|12979_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       291  (0.0212844); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 444.32
//
Query:       MMETSP1325-20131115|12978_1  [L=352]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0028   17.0   9.7     0.0028   17.0   6.7    3.5  3  PF01391.13 Collagen triple helix repeat (20 copies)


Domain annotation for each model (and alignments):
>> PF01391.13  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   5.0   0.00036       4.9      15      52 ..     117     154 ..      87     156 .. 0.46
   2 !   17.0   6.7     2e-07    0.0028       4      58 ..     133     187 ..     131     198 .. 0.54
   3 ?   -3.8   4.3      0.64   8.8e+03      30      42 ..     269     281 ..     252     298 .. 0.54

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.00036
   PF01391.13  15 pGkrGepGeaGekGekGpaGekGppGaaGkpGapGekG 52 
                  +G++ ++G++G + ++G +G + + G  G + ++G++G
  MMETSP1325-20131115|12978_1 117 SGAASSAGSSGITSSAGSSGITSSAGISGITSSAGSSG 154
                  22222222222222222222222222222222222222 PP

  == domain 2    score: 17.0 bits;  conditional E-value: 2e-07
   PF01391.13   4 GepGepGppGppGkrGepGeaGekGekGpaGekGppGaaGkpGapGekGeaGapg 58 
                  G++G   ++G +G + ++G++G++ ++G +G +G++G+ G + ++G++G a ++g
  MMETSP1325-20131115|12978_1 133 GSSGITSSAGISGITSSAGSSGSASSTGSSGIAGSTGSGGIASSAGSSGIASSAG 187
                  5555555555555555555555555555555555555555555555555444444 PP

  == domain 3    score: -3.8 bits;  conditional E-value: 0.64
   PF01391.13  30 kGpaGekGppGaa 42 
                  +G+  ++G++Gaa
  MMETSP1325-20131115|12978_1 269 EGEGAADGEQGAA 281
                  3333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       693  (0.0506875); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.42s 00:00:01.25 Elapsed: 00:00:00.62
# Mc/sec: 1360.51
//
Query:       MMETSP1325-20131115|12986_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.30s 00:00:00.63 Elapsed: 00:00:00.48
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|12981_1  [L=250]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-61  204.5   0.2    9.8e-61  204.2   0.1    1.1  1  PF00227.21 Proteasome subunit
    1.5e-13   49.6   0.0    2.9e-13   48.7   0.0    1.5  1  PF10584.4  Proteasome subunit A N-terminal signature
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.22   11.2   0.0    1.4  1  PF06718.6  Protein of unknown function (DUF1203)


Domain annotation for each model (and alignments):
>> PF00227.21  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.2   0.1   2.1e-64   9.8e-61       1     188 [.      40     226 ..      40     228 .. 0.96

  Alignments for each domain:
  == domain 1    score: 204.2 bits;  conditional E-value: 2.1e-64
                  HHC--BEEEEEETTEEEEEEEECEEETTTEEESSSSSSEEEEETTEEEEEE--HHHHHHHHHHHHHHHHHHHHHHSSGGHHHHHHHHHHHHHHHHHHHH....TSSCTTCEEEEEEEETTTSSEEEEEE----EEEESSSEEEE-HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHHHHHHBTTHCTSEEEE CS
   PF00227.21   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigmafaGlaaDartlverarseaqlyrlrygrpisverlvkrlaallqaytqrs....grrpfgvslliagvdeeggpqlyqidpsGsvieeknavaiGsgseaaktlleklykedltleeavelavkalkealerdklsgknveva 188
                  ++ G+t+vG+k+k g++la++kr+t  s ll+ s+veK++++d hig a++Gl+aDartlv++ar eaq++r++y++p+++e lv+ +++l+++   ++      rpfgv+ll+ag+d++g p+l+ +dpsG+++e+k a aiGsgse a+++l ++y++d+t+eea+ la+k lk+++e +k+ ++nveva
  MMETSP1325-20131115|12981_1  40 INLGSTAVGVKTKSGILLAVEKRVT--SVLLDASSVEKVMEVDSHIGTAMSGLIADARTLVDHARIEAQNHRFTYNEPMRTEALVQGVCDLMLSFGESGdekkMSRPFGVALLVAGCDDTG-PKLFFCDPSGTYVEYK-AKAIGSGSEGAQSALLEEYSDDMTVEEAELLAIKTLKAVME-EKIANDNVEVA 226
                  578**********************..*******************************************************************99865444488*************777.***************8.*****************************************.89*******98 PP

>> PF10584.4  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.0   6.4e-17   2.9e-13       1      23 []      17      39 ..      17      39 .. 0.98

  Alignments for each domain:
  == domain 1    score: 48.7 bits;  conditional E-value: 6.4e-17
                 T---TT--------HHHHHHHHH CS
    PF10584.4  1 YDrslTtFSPdGRLfQVEYAlkA 23
                 YDr ++tFSP+GRLfQVEYA +A
  MMETSP1325-20131115|12981_1 17 YDRGVNTFSPEGRLFQVEYARNA 39
                 ********************998 PP

>> PF06718.6  Protein of unknown function (DUF1203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.8e-05      0.22      61     112 ..     186     237 ..     168     240 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 4.8e-05
    PF06718.6  61 rdlalrgysadgrivearlvegeeleaaleelladpevayvhvrsaangCya 112
                  ++ +l  ys+d  + ea+l++ + l+a +ee +a+++v+   v    ++ y 
  MMETSP1325-20131115|12981_1 186 QSALLEEYSDDMTVEEAELLAIKTLKAVMEEKIANDNVEVARVDETGYNLYS 237
                  5678999************************************999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       368  (0.0269163); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.49
# Mc/sec: 1222.63
//
Query:       MMETSP1325-20131115|12987_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.035   14.1   6.1      0.042   13.9   4.2    1.1  1  PF11928.3  Domain of unknown function (DUF3446)
       0.48    9.8   4.7        0.5    9.7   3.3    1.0  1  PF12941.2  HCV NS5a protein C-terminal region
        4.4    7.8   6.6        4.6    7.7   4.6    1.1  1  PF03964.10 Chorion family 2


Domain annotation for each model (and alignments):
>> PF11928.3  Domain of unknown function (DUF3446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   4.2   9.1e-06     0.042      28      63 ..       6      39 ..       3      48 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 9.1e-06
    PF11928.3 28 vgvsappassssssssssssassqssslscsvsqse 63
                 +g s+pp++++ssss  sssa+ +s+    +  +++
  MMETSP1325-20131115|12987_1  6 LGSSPPPSAAASSSS--SSSAALASAATAITTTTTS 39
                 555555555444444..5788878877766665555 PP

>> PF12941.2  HCV NS5a protein C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.3   0.00011       0.5      10      45 ..       2      41 ..       1      48 [. 0.58

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00011
    PF12941.2 10 rrlarGs..pPslasssasqlsapslka.t.cttakehPd 45
                 rrl  Gs  pPs a+ss+s  sa+   a t  tt++++P 
  MMETSP1325-20131115|12987_1  2 RRLLLGSspPPSAAASSSSSSSAALASAaTaITTTTTSPA 41
                 6777676446788877777777654443131455555564 PP

>> PF03964.10  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   4.6     0.001       4.6      39      59 ..      12      32 ..       3      40 .. 0.76

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.001
   PF03964.10 39 gslvssssdssAaaaAasala 59
                  s ++sss+ss+aa+A++a a
  MMETSP1325-20131115|12987_1 12 PSAAASSSSSSSAALASAATA 32
                 467788888888888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       566  (0.0413985); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.32u 0.43s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 234.84
//
Query:       MMETSP1325-20131115|12989_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.073   13.4   0.0      0.089   13.1   0.0    1.2  1  PF14361.1 RsbT co-antagonist protein rsbRD N-terminal domain


Domain annotation for each model (and alignments):
>> PF14361.1  RsbT co-antagonist protein rsbRD N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.5e-06     0.089      16      77 ..      21      86 ..       6      87 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.5e-06
    PF14361.1 16 rWieevlatypertdrlseaelreqanpvldalaealesg....ldllaeeweelrelLeelsriR 77
                 rW+++  ++ p  ++ +s  +l+e  np++++ ++al ++     d   +e++++ e++++++  R
  MMETSP1325-20131115|12989_1 21 RWLSSTAEKIPVVEGGFSDPQLKEIPNPLYETAQSALDKScyrsIDWKISEHKPVIEAIQRMVANR 86
                 8***************************************98777777888899999988888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|12993_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       640  (0.046811); expected 273.4 (0.02)
Passed bias filter:                      445  (0.0325483); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 545.55
//
Query:       MMETSP1325-20131115|12994_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-06   26.0   2.7    6.1e-06   25.8   1.9    1.0  1  PF03151.11 Triose-phosphate Transporter family
  ------ inclusion threshold ------
      0.032   14.3   2.3       0.04   13.9   1.6    1.1  1  PF13536.1  Multidrug resistance efflux transporter
      0.077   12.9   1.8        0.1   12.5   1.3    1.1  1  PF00892.15 EamA-like transporter family


Domain annotation for each model (and alignments):
>> PF03151.11  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   1.9   1.3e-09   6.1e-06      78     152 ..      10      84 ..       2      85 .. 0.95

  Alignments for each domain:
  == domain 1    score: 25.8 bits;  conditional E-value: 1.3e-09
   PF03151.11  78 vryvlllllngvlafllnisaflllervSsltlsvagivkrvlvivlsviifgdkitflnilGlliallGvvlYs 152
                  +++++llll++v+  +   s   + + vS+ t++ +g++ ++l+i+  v++++++ +++    l++++lG ++Y 
  MMETSP1325-20131115|12994_1  10 YYGIVLLLLSCVVGTGISYSGWYCRSLVSATTYTLVGVMNKFLTIIGNVLVWDQHASPTGLAFLFLCILGGAMYR 84 
                  5799********************************************************************996 PP

>> PF13536.1  Multidrug resistance efflux transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   1.6   8.8e-06      0.04      34     103 ..      13      82 ..       5      89 .. 0.82

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 8.8e-06
    PF13536.1  34 llwlllagllgfglfyalltlAakhap.glvaaitaltpllaallslllfkeklpkrellaslliliGvvl 103
                  + +lll++++g g+ y ++  + ++++ ++ +++ +++ +l+++  +l+  ++ +   l +++l+++G ++
  MMETSP1325-20131115|12994_1  13 IVLLLLSCVVGTGISYSGWY-CRSLVSaTTYTLVGVMNKFLTIIGNVLVWDQHASPTGLAFLFLCILGGAM 82 
                  5678999****999999987.44444415777888889999999999999**************9999876 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.3   2.3e-05       0.1      48     123 ..       8      82 ..       2      84 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.3e-05
   PF00892.15  48 islkdilallllgllgtvlgyllffyalkktsasnaslitslePvftillsvlllgekltlkqllgivlillGvll 123
                  ++   i  lll +++gt++ y  ++   + +sa++ +l+  +   +ti+  vl++ +  +++ l++++l++lG ++
  MMETSP1325-20131115|12994_1   8 FPYYGIVLLLLSCVVGTGISYSGWY-CRSLVSATTYTLVGVMNKFLTIIGNVLVWDQHASPTGLAFLFLCILGGAM 82 
                  56678899**************996.6799******************************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       314  (0.0229666); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.35s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 546.99
//
Query:       MMETSP1325-20131115|13004_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.0   2.5       0.51    9.5   1.8    1.8  1  PF06633.6 Protein of unknown function (DUF1155)


Domain annotation for each model (and alignments):
>> PF06633.6  Protein of unknown function (DUF1155)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.8   3.7e-05      0.51       5      16 ..      21      33 ..      19      39 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 3.7e-05
    PF06633.6  5 LSTTL.SFEPPLS 16
                 +STT+ SFEPPLS
  MMETSP1325-20131115|13004_1 21 MSTTVpSFEPPLS 33
                 789877******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 596.43
//
Query:       MMETSP1325-20131115|13017_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      345  (0.0252341); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.60
# Mc/sec: 375.43
//
Query:       MMETSP1325-20131115|13015_1  [L=196]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-06   26.5   1.6    6.7e-06   25.7   1.1    1.4  1  PF00397.21 WW domain
  ------ inclusion threshold ------
      0.015   13.8   2.0      0.019   13.5   1.4    1.2  1  PF04625.8  DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> PF00397.21  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   1.1   9.8e-10   6.7e-06       4      31 .]     171     196 .]     169     196 .] 0.92

  Alignments for each domain:
  == domain 1    score: 25.7 bits;  conditional E-value: 9.8e-10
                  SEEE.E.E----EEEEETTT--EESS-- CS
   PF00397.21   4 gWeersddddGrvYYyNheTgetqWekP 31 
                  +W++++  + G++++yN  Tg++ We+P
  MMETSP1325-20131115|13015_1 171 PWRQVT-AE-GQTFWYNELTGVSAWEHP 196
                  6*9988.89.*****************9 PP

>> PF04625.8  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.4   2.7e-06     0.019      90     124 ..     136     170 ..      84     179 .. 0.77

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.7e-06
    PF04625.8  90 laqlpampalpgllgaaapvpapapaaaaapaaas 124
                  ++++ +  a   l+g + p papapa+a+apa+  
  MMETSP1325-20131115|13015_1 136 VSDFDPTAASRSLIGMSNPTPAPAPAPAPAPAKKD 170
                  445566677889*******************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 920.95
//
Query:       MMETSP1325-20131115|13028_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.007   15.8   0.1      0.008   15.6   0.1    1.2  1  PF09549.5 Bpu10I restriction endonuclease
  ------ inclusion threshold ------
       0.34   10.2   2.6       0.39   10.0   1.8    1.1  1  PF03280.9 Proteobacterial lipase chaperone protein


Domain annotation for each model (and alignments):
>> PF09549.5  Bpu10I restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   1.2e-06     0.008     108     140 ..      33      65 ..      17      73 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.2e-06
    PF09549.5 108 eaaataedlKeavPgalYfvvaEyldltpasne 140
                  ++a tae++K+  P  l +++aE++d+++ +++
  MMETSP1325-20131115|13028_1  33 NMAMTAEQMKNMKPEDLDVMIAEVADMDDLQKQ 65 
                  6799************************98764 PP

>> PF03280.9  Proteobacterial lipase chaperone protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.8   5.7e-05      0.39      69     132 ..      21      82 ..      12      88 .. 0.90

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 5.7e-05
    PF03280.9  69 lrIkqdasLsdeqkaqrlaaleaqlPeelrearreaallqelaqateelqkqgasaqelraara 132
                   +I++++s++++  a   +++++  Pe+l   ++e a + +l+++  +l++ g++++ + a ++
  MMETSP1325-20131115|13028_1  21 KQIMAEESMDPKNMAMTAEQMKNMKPEDLDVMIAEVADMDDLQKQ--QLKAMGMDPDMMQASMK 82 
                  589999************************************988..78*******99987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1071  (0.0783353); expected 273.4 (0.02)
Passed bias filter:                      697  (0.0509801); expected 273.4 (0.02)
Passed Vit filter:                        65  (0.00475424); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.42s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 445.04
//
Query:       MMETSP1325-20131115|13036_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                      101  (0.00738736); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.47
# Mc/sec: 336.51
//
Query:       MMETSP1325-20131115|13045_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-26   92.0   0.0    1.2e-26   91.9   0.0    1.0  1  PF03259.12 Roadblock/LC7 domain


Domain annotation for each model (and alignments):
>> PF03259.12  Roadblock/LC7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.9   0.0   8.9e-31   1.2e-26       2      90 ..       5      93 ..       4      94 .. 0.97

  Alignments for each domain:
  == domain 1    score: 91.9 bits;  conditional E-value: 8.9e-31
   PF03259.12  2 aeellellqrvpgvrgalvvskdGlvlasstldnddadrlAalasgllaaakalarelg.egelkelliegkkgelyltpagegalLvvl 90
                 +ee+l+++q+++gv+g+l+ +++G++++s +l+ +d + ++al+s+l+++a++++r+l+ ++el++l+i++kk+e++++p +e++l+v++
  MMETSP1325-20131115|13045_1  5 VEETLKRIQSHRGVKGVLICNSEGVPIRS-NLPAEDEQTYSALVSQLAMKANNVVRNLDeADELTFLRIRSKKHEIMIAPDKEFLLIVIQ 93
                 79***************************.*****************************************************9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       449  (0.0328408); expected 273.4 (0.02)
Passed bias filter:                      405  (0.0296226); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|13044_1  [L=198]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.41s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 930.35
//
Query:       MMETSP1325-20131115|13050_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-29  100.6   5.2    3.7e-29  100.0   3.6    1.3  1  PF00957.16 Synaptobrevin
      6e-22   76.8   0.0      1e-21   76.1   0.0    1.4  1  PF13774.1  Regulated-SNARE-like domain
  ------ inclusion threshold ------
      0.014   14.3   0.1      0.032   13.1   0.0    1.5  2  PF04371.10 Porphyromonas-type peptidyl-arginine deiminase
      0.073   11.0   1.1      0.099   10.5   0.8    1.2  1  PF00523.13 Fusion glycoprotein F0
      0.076   12.4   0.1       0.13   11.6   0.1    1.3  1  PF00015.16 Methyl-accepting chemotaxis protein (MCP) signalling domain
       0.11   12.0   2.5       0.18   11.3   1.7    1.3  1  PF13129.1  Protein of unknown function (DUF3953)


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.0   3.6   1.6e-32   3.7e-29       2      89 .]     125     212 ..     124     212 .. 0.98

  Alignments for each domain:
  == domain 1    score: 100.0 bits;  conditional E-value: 1.6e-32
   PF00957.16   2 ndklskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklkrkmwwknmklliililvvlililiiiivicg 89 
                  +d +s++++++d+vk++m +Ni+ vlergekl++Lvdkte+Lq+sa++Fk +++klk+ m+wk +k+++i+++v++++i+ii +++cg
  MMETSP1325-20131115|13050_1 125 ADAMSEVNQKMDDVKNVMVQNIEMVLERGEKLELLVDKTEQLQSSADTFKFTSNKLKNVMFWKTVKFYAIIAFVIALVIIIISMIACG 212
                  6899**********************************************************************************96 PP

>> PF13774.1  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.1   0.0   4.5e-25     1e-21       1      82 [.      28     111 ..      28     112 .. 0.92

  Alignments for each domain:
  == domain 1    score: 76.1 bits;  conditional E-value: 4.5e-25
    PF13774.1   1 vakqilkklppnspqklsyesgn.yvfhylvedglvylvvadksy..prrlafafLeeikreFlstyggsqiesaspyaf.aeFdt 82 
                  +a+ +l k++ ++  k++y ++n yvfhylv+dg+vy+++ d+++   rr++fafLe ik++F s yg ++i++a+ +a+ +eF +
  MMETSP1325-20131115|13050_1  28 IARVLLGKISADD-GKMTYVYDNsYVFHYLVDDGVVYMCMVDDAQngKRRIPFAFLETIKDRFKSMYG-DSIRTAIHFAMdKEFGP 111
                  6899******655.7*****9999*******************88778*******************7.79*********999976 PP

>> PF04371.10  Porphyromonas-type peptidyl-arginine deiminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.4e-05     0.032     226     288 ..       5      70 ..       4      78 .. 0.78
   2 ?   -2.1   0.0       0.6   1.4e+03      25      53 ..     132     161 ..     108     183 .. 0.61

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.4e-05
                  HHHHHHHHHHHCT-B-----B-EEEEEE--SB--B----B...----TT--EE-SSEEE.EEE-SSC CS
   PF04371.10 226 yealkealevlkeltdakGrklevvklplpkallreeger...laasYvNfliangavi.vPtygde 288
                  y+++ + + vl+e+t+++G+ +++ ++ l k +  ++g++    ++sYv +++++++v+ +++ +d+
  MMETSP1325-20131115|13050_1   5 YAIIARRQTVLAEETQSTGNFVQIARVLLGK-ISADDGKMtyvYDNSYVFHYLVDDGVVyMCMVDDA 70 
                  566778899*********************9.77777775222579999999999887725666655 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.6
                  TGGGCCHHHHHHHHHHHHHCC.SEEEEEES CS
   PF04371.10  25 reklkpaqeafaelakaiakf.ekvtvlvs 53 
                  ++k+ ++++++++ ++ + ++ ek+ +lv 
  MMETSP1325-20131115|13050_1 132 NQKMDDVKNVMVQNIEMVLERgEKLELLVD 161
                  344455555554444443322255555554 PP

>> PF00523.13  Fusion glycoprotein F0
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.8   4.3e-05     0.099     431     489 ..     150     208 ..     112     209 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 4.3e-05
                  XXXXX.XCCCHHHHHHHHHHHHHHHHHHHHCCCTXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF00523.13 431 leplD.isteLaqvnksledakeliekSnellssvkvsksttsvviiiivlvivllilll 489
                  le+   +++ L + +++l+++ +  +  +++l++v  +k+    +ii+ v++ v++i+ +
  MMETSP1325-20131115|13050_1 150 LERGEkLEL-LVDKTEQLQSSADTFKFTSNKLKNVMFWKTVKFYAIIAFVIALVIIIISM 208
                  333332333.4456899*************************999**9999999999976 PP

>> PF00015.16  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   5.7e-05      0.13     162     212 ..     125     175 ..     120     176 .. 0.95

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 5.7e-05
                  H--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH CS
   PF00015.16 162 sasieevnqaveeidevtkenaalveeaaaaaetleeqaeeleelvaqFkl 212
                  + +++evnq ++++++v  +n  +v e  +  e l +++e+l+++ + Fk 
  MMETSP1325-20131115|13050_1 125 ADAMSEVNQKMDDVKNVMVQNIEMVLERGEKLELLVDKTEQLQSSADTFKF 175
                  67899********************************************95 PP

>> PF13129.1  Protein of unknown function (DUF3953)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.7     8e-05      0.18      22      41 ..     190     209 ..     178     210 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 8e-05
    PF13129.1  22 KitGillflagiFciiVgis 41 
                  K+++i++f++++ +ii++++
  MMETSP1325-20131115|13050_1 190 KFYAIIAFVIALVIIIISMI 209
                  9*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1162  (0.0849912); expected 273.4 (0.02)
Passed bias filter:                      719  (0.0525892); expected 273.4 (0.02)
Passed Vit filter:                        84  (0.00614394); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.39s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 1147.19
//
Query:       MMETSP1325-20131115|13056_1  [L=130]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0027   17.5  17.3      0.011   15.5   6.7    2.2  2  PF00170.16 bZIP transcription factor


Domain annotation for each model (and alignments):
>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.6   0.00042       5.7      13      28 ..      44      60 ..      42      64 .. 0.87
   2 !   15.5   6.7     8e-07     0.011       1      24 [.     106     129 ..     106     130 .] 0.94

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00042
                 HHHHHHHH.HHHHHHHH CS
   PF00170.16 13 NReAArrs.RqRKkaei 28
                 NR AArrs RqR +++ 
  MMETSP1325-20131115|13056_1 44 NRMAARRSlRQRPQKRY 60
                 *******9899988875 PP

  == domain 2    score: 15.5 bits;  conditional E-value: 8e-07
                  XXXXCHHHHHHHHHHHHHHHHHHH CS
   PF00170.16   1 ekelkrerrkqkNReAArrsRqRK 24 
                  ++++k e rk++NR +A +sR+RK
  MMETSP1325-20131115|13056_1 106 DRARKLELRKIRNRQSAAASRKRK 129
                  5889*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 635.77
//
Query:       MMETSP1325-20131115|13060_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 263.13
//
Query:       MMETSP1325-20131115|13061_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 560.85
//
Query:       MMETSP1325-20131115|13067_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|13069_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 301.76
//
Query:       MMETSP1325-20131115|13075_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0025   17.8   0.0     0.0031   17.6   0.0    1.1  1  PF11392.3 Protein of unknown function (DUF2877)


Domain annotation for each model (and alignments):
>> PF11392.3  Protein of unknown function (DUF2877)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   2.3e-07    0.0031       9      80 ..      28     100 ..      26     107 .] 0.88

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 2.3e-07
    PF11392.3   9 TPsgDDflvgllavllleqkaleelkeelqelikaakerttdvSatl.Lekavkgqvsepilallealvsges 80 
                  TP+ D+ l+g+la ++ ++ + +++++ +++ +++a +  + +S+   Le+a++g  ++ ++++ e+  sg +
  MMETSP1325-20131115|13075_1  28 TPKVDERLCGYLATIVSSHYRERAYQAASRQRVDYALAYEQMISTYCrLEDALRGVLPKLLRDMSEDSASGPT 100
                  9***********9999999999**********************7544**********999999888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 493.10
//
Query:       MMETSP1325-20131115|13074_1  [L=275]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-34  119.3   0.0    1.6e-34  119.0   0.0    1.1  1  PF01150.12 GDA1/CD39 (nucleoside phosphatase) family


Domain annotation for each model (and alignments):
>> PF01150.12  GDA1/CD39 (nucleoside phosphatase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.0   0.0   1.2e-38   1.6e-34     165     425 ..       6     273 ..       1     275 [] 0.87

  Alignments for each domain:
  == domain 1    score: 119.0 bits;  conditional E-value: 1.2e-38
   PF01150.12 165 ktvgvidlGGaStQiaFalqeeseiaskvedinellqrerledekYdvyvvsfLgyGanealrkylaklisnaeee.kgrilsdpClpkglnktvevseveekvfkirgkgnyeqCsksikellnknkvcnee..........qClfngvhapsidaeqkkigassyfyttgdflklvseve.........vakkekltkkikeacsesweqikssakktkeknvseelkeacfklayvlslLhdgFsldkeveliqsvkkieeseiawtlGavlellsal 425
                     g++dlGG StQi+++++    ++++ +d +    +    +   d +v+s+L yG+++a ++    l+ ++ e+ +   +s+pC + g  ++        +++   g+g++++C++ ike+l+++++c+ e           C + +v +p+id   +++  s yf+ + ++  ++++ e         + +  +l + ++ +cs +w+++k ++   ++ + +e+l + cf++ y+ ++L+ gF+++++ ++i  +  i + e+ wtlG++l++l+ +
  MMETSP1325-20131115|13074_1   6 TVLGAMDLGGSSTQIVYQPK----SKQHDRDSD----EGAPPLSMPDFFVHSYLSYGVDKAKERLWDLLLAKSTEDtSEDHVSNPCDFTGRPEVWGE-----DARSMVGTGDVAKCQQIIKEMLFDESSCDLEavdsgkmagvGCGLDSVRHPPIDHSTQFVAMSVYFFALDAMRVITEAAEgvdplphwpSPTVLELLEVAERFCSMEWTTVKGEYGDLHDWSYPEQLPHRCFEAVYIATILQYGFGFNPHGREIMYALSIDGMEVEWTLGYALQALQHS 273
                  567*****************....344444443....22333444489**************9999988877776636789*****99998877654.....46789***********************98877777777778************9999999999999998888888888899999999888999********************************************************************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.36s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 1318.00
//
Query:       MMETSP1325-20131115|13079_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|13088_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   13.7   3.2      0.037   13.3   2.2    1.2  1  PF04977.10 Septum formation initiator
      0.068   12.8   0.7      0.088   12.5   0.5    1.1  1  PF06428.6  GDP/GTP exchange factor Sec2p
       0.23   11.1   2.9       0.27   10.8   2.0    1.1  1  PF07926.7  TPR/MLP1/MLP2-like protein
        0.4   11.2   3.7       0.57   10.7   2.6    1.2  1  PF07704.6  Rv0623-like transcription factor


Domain annotation for each model (and alignments):
>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   2.2   1.1e-05     0.037      28      63 ..      18      55 ..       5      56 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 1.1e-05
   PF04977.10 28 alqaelaklkaeneeLeaevkdLks..dedyieeqARs 63
                 al++el++ + ++++L+ +v+dL+   d++ +++ AR+
  MMETSP1325-20131115|13088_1 18 ALKRELEDARSREDALKTQVRDLSRlfDQAQVARSARK 55
                 799********************6599***99999995 PP

>> PF06428.6  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.5   2.6e-05     0.088      52      94 ..      15      58 ..       3      65 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT-------XX.XX CS
    PF06428.6 52 knekleeqLkekelllevlqaqlkeLKelleslekekngss.ek 94
                  ++ l+ +L++++   ++l+ q+++L+ l+ + + +++ ++ + 
  MMETSP1325-20131115|13088_1 15 SESALKRELEDARSREDALKTQVRDLSRLFDQAQVARSARKgSP 58
                 3567999***********************99888776555444 PP

>> PF07926.7  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.0   7.9e-05      0.27      48     101 ..      10      63 ..       2      70 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 7.9e-05
    PF07926.7  48 erelikhaetiqeLtklkkelaelqkeaselrkeadsakaelneleekweeeks 101
                   r++   ++  +eL+++++  + l++++  l  ++d+a+   +  +++ + +ks
  MMETSP1325-20131115|13088_1  10 SRQVASESALKRELEDARSREDALKTQVRDLSRLFDQAQVARSARKGSPKGKKS 63 
                  699**************************************9988888777776 PP

>> PF07704.6  Rv0623-like transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.6   0.00017      0.57      18      69 ..       4      58 ..       2      65 .. 0.63

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00017
    PF07704.6 18 aaltgeskteAvreAleerLe....rrrrkkrlverlaaivrrkaaarlldakrsp 69
                  +   es + A ++Al+++Le    r+++ k+ v +l ++  ++a+ + + +k sp
  MMETSP1325-20131115|13088_1  4 RQSERESRQVASESALKRELEdarsREDALKTQVRDLSRL-FDQAQVARSARKGSP 58
                 566779999************9555555555555555555.444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       718  (0.0525161); expected 273.4 (0.02)
Passed bias filter:                      545  (0.0398625); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.54
# Mc/sec: 430.46
//
Query:       MMETSP1325-20131115|13090_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       102  (0.0074605); expected 273.4 (0.02)
Passed bias filter:                       97  (0.00709479); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.35s 00:00:00.62 Elapsed: 00:00:00.61
# Mc/sec: 137.50
//
Query:       MMETSP1325-20131115|13093_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.017   13.5   0.2      0.019   13.4   0.1    1.0  1  PF06957.6  Coatomer (COPI) alpha subunit C-terminus
       0.11   12.1   0.8       0.17   11.5   0.6    1.3  1  PF02185.11 Hr1 repeat


Domain annotation for each model (and alignments):
>> PF06957.6  Coatomer (COPI) alpha subunit C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   2.7e-06     0.019      50     149 ..      24     123 ..       6     128 .. 0.71

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.7e-06
    PF06957.6  50 dedelveaedgladaeeGe..needeeegGWdveddLelPpeldvpkdkagnadsdvfvaPnkglsvsqeWankssLaadhvaaGsfetalrLLhdqlGvvn 149
                  de   +  + + a+a+ G   ++ ++ + GWd +dd  +P   ++   +ag+ +s+     n+++s   +  +  ++ +++ +  ++e +lr L+  lGv+ 
  MMETSP1325-20131115|13093_1  24 DESPPARSQAAQAAAQGGGprGKPGDRNFGWDADDDGIMPTPPKAGGRSAGSGQSGRQLKSNQSTSSVGQAQR--EIEMQRSTIMTLEDSLRRLQVDLGVMA 123
                  554445555555555555545788999************9988888889999999999999998876655444..445555555678888888888888875 PP

>> PF02185.11  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.6   2.5e-05      0.17      26      66 ..      81     122 ..      77     126 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 2.5e-05
                  XX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF02185.11  26 al.etdkksvlqeaesklreseqkielLkeqLeklqkrsqns 66 
                  +l +++  s + +a+ +++  ++ i +L+++L++lq    + 
  MMETSP1325-20131115|13093_1  81 QLkSNQSTSSVGQAQREIEMQRSTIMTLEDSLRRLQVDLGVM 122
                  55334444479*************************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       342  (0.0250146); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.56
# Mc/sec: 573.41
//
Query:       MMETSP1325-20131115|13096_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 289.37
//
Query:       MMETSP1325-20131115|13091_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-19   67.9   1.6    7.8e-19   67.7   1.1    1.1  1  PF04930.10 FUN14 family
  ------ inclusion threshold ------
       0.06   12.6   0.4       0.13   11.5   0.3    1.5  1  PF13202.1  EF hand
      0.067   12.4   0.0       0.14   11.4   0.0    1.6  1  PF00036.27 EF hand
      0.089   12.4   0.2       0.17   11.5   0.1    1.5  1  PF00404.13 Dockerin type I repeat


Domain annotation for each model (and alignments):
>> PF04930.10  FUN14 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7   1.1   2.3e-22   7.8e-19       2     100 .]      14     114 ..      13     114 .. 0.86

  Alignments for each domain:
  == domain 1    score: 67.7 bits;  conditional E-value: 2.3e-22
   PF04930.10   2 lgiGalsGlvtGyalkkvgklaaiavGggilllqilaqkGlikinwkklekkvdkvaekve.adkaeke.vdtllkkaedllkkniiflaaFlaGfllGfa 100
                  lg+G+++G+ +Gyalkk+gk+aa+a G +++++q +a+ G i i w+k+e+++++  +     + + ++ v  + k ++ +l+  ++  a+F  Gf+lG++
  MMETSP1325-20131115|13091_1  14 LGFGGFLGMTAGYALKKIGKMAAFATGCVFIMFQGAAYAGFIDIHWNKIEHRMEQSLDVDGdGKLTMNDaVVIWKKYVKPMLTYHLPSGAGFSFGFMLGLK 114
                  899**************************************************998877776444555505555555666888999*************96 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   3.7e-05      0.13       7      18 ..      69      80 ..      68      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 3.7e-05
                 HH--S----B-H CS
    PF13202.1  7 afDlNgDGkIsr 18
                  +D++gDGk+++
  MMETSP1325-20131115|13091_1 69 SLDVDGDGKLTM 80
                 68********96 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.1e-05      0.14       9      28 ..      70      89 ..      68      90 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.1e-05
                 HCTTTSSEBEHHHHHHHHHH CS
   PF00036.27  9 fDkDgdGkIsfeEfkealkk 28
                 +D+DgdGk++ ++ + ++kk
  MMETSP1325-20131115|13091_1 70 LDVDGDGKLTMNDAVVIWKK 89
                 8*********9987777665 PP

>> PF00404.13  Dockerin type I repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1     5e-05      0.17       1      15 [.      71      85 ..      71      90 .. 0.92

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 5e-05
                 -TT-SS--SHHHHHH CS
   PF00404.13  1 DVNgDGkVnalDlal 15
                 DV+gDGk ++ D+  
  MMETSP1325-20131115|13091_1 71 DVDGDGKLTMNDAVV 85
                 9***********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 524.49
//
Query:       MMETSP1325-20131115|13092_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       104  (0.00760679); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 258.43
//
Query:       MMETSP1325-20131115|13097_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 275.81
//
Query:       MMETSP1325-20131115|13103_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.037   13.7   0.1      0.059   13.1   0.1    1.3  1  PF11625.3 Protein of unknown function (DUF3253)


Domain annotation for each model (and alignments):
>> PF11625.3  Protein of unknown function (DUF3253)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   4.3e-06     0.059      19      38 ..      35      54 ..      30      68 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.3e-06
                 S-TT--B-HHHHHHHH-TTS CS
    PF11625.3 19 rgpgksiCPsevAralapda 38
                 r++++s+CPse  ra ++++
  MMETSP1325-20131115|13103_1 35 RTEPRSFCPSELSRACSGER 54
                 8899***********99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       123  (0.00899649); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 464.89
//
Query:       MMETSP1325-20131115|13102_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.32s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 923.60
//
Query:       MMETSP1325-20131115|13109_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.8   0.0       0.17   11.3   0.0    1.3  1  PF12365.3 Protein of unknown function (DUF3649)


Domain annotation for each model (and alignments):
>> PF12365.3  Protein of unknown function (DUF3649)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.2e-05      0.17       6      18 ..      20      32 ..      18      33 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.2e-05
    PF12365.3  6 SAwRAWlGLllps 18
                 S+ +AW+G+l+ +
  MMETSP1325-20131115|13109_1 20 SPFHAWVGMLFSA 32
                 899*******876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|13110_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|13119_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 323.72
//
Query:       MMETSP1325-20131115|13118_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00079   17.7  13.9    0.00088   17.5   9.6    1.0  1  PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
     0.0094   14.4  20.2      0.014   13.8  14.0    1.2  1  PF03148.9  Tektin family
  ------ inclusion threshold ------
      0.012   13.9  11.6      0.018   13.4   8.0    1.3  1  PF13166.1  AAA domain
      0.036   12.5  17.1      0.044   12.3  11.8    1.1  1  PF08317.6  Spc7 kinetochore protein
       0.04   13.3  16.7      0.019   14.3   6.9    2.1  2  PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
      0.078   13.0   0.4      0.078   13.0   0.3    1.8  2  PF05388.6  Carboxypeptidase Y pro-peptide
      0.091   12.2  10.8        1.2    8.6   0.4    2.4  2  PF05064.8  Nsp1-like C-terminal region
       0.17   10.9  19.2       0.15   11.1  11.7    2.0  2  PF13851.1  Growth-arrest specific micro-tubule binding
       0.24   10.8  20.4        1.9    7.9  14.1    1.9  1  PF04156.9  IncA protein
       0.24   11.4  16.3       0.52   10.3   6.0    2.2  2  PF05837.7  Centromere protein H (CENP-H)
       0.27   10.7   5.3       0.67    9.5   0.2    2.2  2  PF04136.10 Sec34-like family
       0.41   10.4   6.3        4.9    7.0   0.0    3.2  2  PF13176.1  Tetratricopeptide repeat
       0.43   10.6   5.5       0.24   11.5   1.6    2.0  2  PF10950.3  Protein of unknown function (DUF2775)
       0.47   10.2   8.4       0.13   11.9   1.3    2.7  3  PF06103.6  Bacterial protein of unknown function (DUF948)
        0.5   10.4   5.1          1    9.4   0.2    2.7  2  PF05190.13 MutS family domain IV
       0.69   10.1  14.3       0.89    9.7   9.9    1.1  1  PF03234.9  Cdc37 N terminal kinase binding
       0.85    8.6   4.3        1.1    8.2   3.0    1.1  1  PF04582.7  Reovirus sigma C capsid protein
       0.99    9.1   8.4       0.27   10.9   1.4    2.4  2  PF12308.3  Neurogenesis glycoprotein
       0.99    7.6  16.0        1.5    7.0   1.7    2.0  2  PF03961.8  Protein of unknown function (DUF342)
        1.1    8.3  15.6       0.13   11.3   3.7    2.1  2  PF11932.3  Protein of unknown function (DUF3450)
        1.2    9.5   6.3       0.91    9.9   1.4    2.2  2  PF03730.9  Ku70/Ku80 C-terminal arm
        1.5    9.1   5.6         12    6.2   1.0    2.9  2  PF02465.13 Flagellar hook-associated protein 2 C-terminus
        1.8    8.2   7.9        3.5    7.3   0.8    2.4  2  PF12644.2  Protein of unknown function (DUF3782)
        1.8    8.4   4.5        3.5    7.5   0.1    3.1  3  PF13181.1  Tetratricopeptide repeat
        1.9    8.3  14.9       0.15   11.8   4.7    2.2  2  PF14282.1  FlxA-like protein
          2    7.9  19.9        1.1    8.7   5.6    2.1  2  PF03962.10 Mnd1 family
        2.8    7.6   6.4        2.8    7.6   3.3    1.9  2  PF07439.6  Protein of unknown function (DUF1515)
          3    7.5  17.7       0.55    9.9   6.6    2.5  3  PF10211.4  Axonemal dynein light chain
        3.5    7.9  17.5         23    5.3   2.6    3.5  2  PF13600.1  N-terminal domain of unknown function (DUF4140)
        3.9    7.8  10.0        7.5    6.9   2.3    2.4  2  PF09177.6  Syntaxin 6, N-terminal
        6.1    6.5  12.6        2.7    7.6   5.0    2.1  2  PF07889.7  Protein of unknown function (DUF1664)
          7    6.7   9.2        1.7    8.7   1.5    2.4  2  PF03670.8  Uncharacterised protein family (UPF0184)
        8.4    5.1  19.7       0.75    8.5   9.3    1.7  2  PF10186.4  UV radiation resistance protein and autophagy-related subunit 14


Domain annotation for each model (and alignments):
>> PF07888.6  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   9.6   2.1e-06   0.00088     140     257 ..      29     149 ..      19     177 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 2.1e-06
    PF07888.6 140 vLqnqLeeaqkerndLmkkklalegevselrsrieeLeaaLatsekkteeLkekyk.eissseeeiseerniLsaqraenrerileLeddiqtlskkvreqeklleql..keikaelerek 257
                   Lq qLe    er+ L ++k +l +e  e+++ i+ Le  +++  +k      +++    ++++ + ee+++L+     +r++i ++++ i + +++ +e+e  ++ l  + +++  e++k
  MMETSP1325-20131115|13118_1  29 NLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDGRVNvAHARKKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALerQLVEILVEQQK 149
                  59**************************************987666666555555504556778899********************************9998776551133555555555 PP

>> PF03148.9  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8  14.0   3.3e-05     0.014     224     361 ..       5     140 ..       2     148 .. 0.93

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.3e-05
    PF03148.9 224 ReaidsileqtandlraqadavnealrkrieetkeakekLenqlkktleeiaeaeknieeLekaikdkeaplkvaqtRLenRtqRpnvElCrDeaqyrLvkEvkeleetieaLkeklaeaeaslkaLeetrakleeei 361
                  R +++ +l + +++   q ++  ++l+k++e++   ++ Le+ + k+l+e++e+e++i++Le++i++ ++  ++   R +    R +  l  De ++ L++ v++ +++i+  ++k+ + ++ +++ e+  ++le+++
  MMETSP1325-20131115|13118_1   5 RTQMHDTLVNHKREALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDGRVNVAHARKKKRL--DEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALERQL 140
                  8889999999999999*********************************************************************99877..*************999999999999999999998888888888876 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   8.0   4.3e-05     0.018     330     456 ..      19     142 ..       2     161 .. 0.62

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.3e-05
    PF13166.1 330 elealeeeleklekaleeKlkdpfs.slelesiadeieeinelvdkinelirkhNekidnlkeeknkakkklwlhlvaelkedideyekklkklekkinslekeleklekeikklekeikelekelkn 456
                  +l +++++  +l+k+le+   +    +   +++ de++e++e++++++e+ir+h +k++  + ++n a+++ ++ l +e+    + + ++++   ++i+++++++++ +++ +++e+++k+le++l +
  MMETSP1325-20131115|13118_1  19 ALVQHKTQSANLQKQLEAVSLERDGlEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDGRVNVAHARKKKRLDEEY----EVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALERQLVE 142
                  44455555555555555543322221333466777778888888888888888888777777766666666655444444....33444555555666666666666666666666666666666654 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  11.8   0.00011     0.044     141     271 ..       3     130 ..       3     164 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00011
    PF08317.6 141 eWRmklleglkeeLeenleelkedeellnkklelinsilpklrekkealkeelasLrqlkdeleecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiaeaekileecr 271
                  eWR+++ ++l +   e l + k+  ++l+k+le+++   + l+++k++l  el++++++ + lee  + + ++ ++ +++  ++++ + +k + l ee + l ++++++++++s++ ++i++ ++ ++e+ 
  MMETSP1325-20131115|13118_1   3 EWRTQMHDTLVNHKREALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEE--QIRQHSNKSAITDGRVNVA-HARKKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKE 130
                  9***********************************************99999999999887665..4444566788888888888.55566888888888888888888888888888888766555443 PP

>> PF07106.8  Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   6.9   4.6e-05     0.019      71     164 ..      17     108 ..       7     112 .. 0.87
   2 ?    3.4   0.6       0.1        43      79     113 ..     110     144 ..     106     153 .. 0.79

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 4.6e-05
    PF07106.8  71 deelnkldaeieelreevqelkqeiselekelkkLtseltteelleeiqelkkeveeieekLeslkeankevtkeeiekvkkeykklkkewkkr 164
                   e l + + + ++l++++++++ e   le+ ++kL  el  +e+ e i++l+++++++++k       ++ +++ +++++++ey+ l +++  +
  MMETSP1325-20131115|13118_1  17 REALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDEL--NEMEEAIKSLEEQIRQHSNKSAITDGRVNVAHARKKKRLDEEYEVLLEAVHTK 108
                  566677788999***************************..9*******************8888888888999999********988776544 PP

  == domain 2    score: 3.4 bits;  conditional E-value: 0.1
    PF07106.8  79 aeieelreevqelkqeiselekelkkLtselttee 113
                  ++i+++ +++ + ++  +e e+++k+L+++l+   
  MMETSP1325-20131115|13118_1 110 DQISDVDSKITACNDRRQEKEDAMKALERQLVEIL 144
                  46999999999999999999999999999995443 PP

>> PF05388.6  Carboxypeptidase Y pro-peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   0.00019     0.078      12      66 ..      19      72 ..       8      78 .. 0.90
   2 ?   -1.7   0.0       6.9   2.9e+03      35      35 ..     131     131 ..      91     158 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.00019
    PF05388.6 12 alvigsaealsvQnplgnvqklvdvfeekkksvlekiaealgeelkelskelkdi 66
                 alv  +++++ +Q++l+ v+   d +e++k ++l++    ++e +k+l++++++ 
  MMETSP1325-20131115|13118_1 19 ALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELN-EMEEAIKSLEEQIRQH 72
                 5677899****************************986.589**********985 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 6.9
    PF05388.6  35 d 35 
                  d
  MMETSP1325-20131115|13118_1 131 D 131
                  1 PP

>> PF05064.8  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   2.7    0.0048         2      51     111 ..      18      78 ..       3      84 .. 0.81
   2 ?    8.6   0.4    0.0029       1.2      57      97 ..     116     157 ..      89     176 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0048
    PF05064.8  51 rlLvengekiskLysevvkaeqeqnkldqeLdfvesqqdeLeslLdryEeeieellsklts 111
                  ++Lv+  ++  +L+++ + +  e + l+   d + ++ +e+e+ ++++Ee+i + ++k+  
  MMETSP1325-20131115|13118_1  18 EALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAI 78 
                  5678888888889999999999999999999999999999999999999999988877655 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0029
    PF05064.8  57 gekiskLysevvkaeqeqnkldqeL.dfvesqqdeLeslLdr 97 
                   +ki++ ++   + e + ++l+++L +++ +qq+ L  +L++
  MMETSP1325-20131115|13118_1 116 DSKITACNDRRQEKEDAMKALERQLvEILVEQQKRLLGILTE 157
                  457777777777777777777777734555677777776665 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1  11.7   0.00037      0.15      77     194 ..      11     126 ..       1     136 [. 0.84
   2 ?    6.6   4.8    0.0085       3.5      27     108 ..      60     139 ..      60     181 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00037
    PF13851.1  77 klkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErdelykkfeaaiqdvqqktelknllLekKlealneelekk.eaqLeevlaaanldpaaleavsekledvleeK 194
                   l ++  ++++L + k++  +l+k+l+++++e + le r +k+ +E +e+++  ++  ++++q++ +k+ +   +++  +++ +k+ +++ e +l+a+  + ++++ v+ k+  + +++
  MMETSP1325-20131115|13118_1  11 TLVNH--KREALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHS-NKSAITDGRVNVAHARKKKRlDEEYEVLLEAVHTKRDQISDVDSKITACNDRR 126
                  45444..4578****************************************88887777777765.689999*****9999888774888899999****************9887654 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0085
    PF13851.1  27 elIkslkeeiaelkkkeekneklmaei.kkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwe 108
                  e Iksl+e+i ++ +k + ++ +++   ++++krl e+ + + e v   + ++++ +++    +    +++e+e+ +k+l+ +
  MMETSP1325-20131115|13118_1  60 EAIKSLEEQIRQHSNKSAITDGRVNVAhARKKKRLDEEYEVLLEAVHTKRDQISDVDSKI---TACNDRRQEKEDAMKALERQ 139
                  57********************999751567899********999998888888877766...55556666666666666544 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  14.1    0.0045       1.9      60     170 ..      19     136 ..      10     153 .. 0.69

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0045
    PF04156.9  60 lllkapvqseedekieesrlqeelsesesqlseleeeleqleerlaeleseledleedlellq........eelksleerlesleesikelakeirelreeisdlkeevqelrselerl 170
                  +l +++ qs +++k+ e ++++e   +e + ++l +el ++ee +++le+++++ ++                +k+l e+ e l e+++ ++++i+++ ++i   +++ qe++ + ++l
  MMETSP1325-20131115|13118_1  19 ALVQHKTQSANLQKQLE-AVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDgrvnvahaRKKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKAL 136
                  56778888888888888.78888888888888888888888888888888888666555555566777777777777777777777888888888877755555555555555555555 PP

>> PF05837.7  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   6.0    0.0013      0.52       3      75 ..      18      93 ..      16      95 .. 0.92
   2 ?    6.2   0.6     0.023       9.6       3      46 ..      96     139 ..      94     163 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.0013
    PF05837.7  3 seilnlqqasretreeLsdvekerlqlkqknrelvrellelkkkkesdre...deelkeklekleaelkkskkkwe 75
                 +++ + +++s +++++L+ v+ er  l+ ++ +l+ el e+++  +s +e   ++++k+++   + ++  ++kk +
  MMETSP1325-20131115|13118_1 18 EALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEqirQHSNKSAITDGRVNVAHARKKKR 93
                 57789999*****************************99999999888888889*************999999876 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.023
    PF05837.7   3 seilnlqqasretreeLsdvekerlqlkqknrelvrellelkkk 46 
                  +e++ l +a++  r+++sdv  +  + +++ +e+   ++ l+++
  MMETSP1325-20131115|13118_1  96 EEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALERQ 139
                  67788899999**********************99999888765 PP

>> PF04136.10  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2    0.0016      0.67      10      45 ..      42      77 ..      32      88 .. 0.89
   2 ?    3.7   0.4     0.099        41      10      71 ..      99     161 ..      86     175 .. 0.78

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.0016
   PF04136.10 10 qtleeeidaiLdqvnsalerLeslkekyefvskkts 45
                 ++le++ d++Ld++n+++e ++sl+e+    s+k +
  MMETSP1325-20131115|13118_1 42 DGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSA 77
                 5788999**********************9999964 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.099
   PF04136.10  10 qtleeeidaiLdqvnsalerLeslkekyefvskktsels.eaceqLlkeqerlselaeeiqkk 71 
                  + l e +    dq++++ +++ + +++ +  ++ + +l+ +  e L+++q+rl  +  e  + 
  MMETSP1325-20131115|13118_1  99 EVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALErQLVEILVEQQKRLLGILTEAGRA 161
                  455566777779999999999999999999999999997357899999999998887766555 PP

>> PF13176.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.012       4.9       8      27 ..      51      70 ..      50      79 .. 0.82
   2 ?    5.6   0.1     0.035        15      11      34 ..     125     149 ..     121     151 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.012
    PF13176.1  8 lysrlgdyekAielyeraLa 27
                 l  +l+++e+Ai+ +e++++
  MMETSP1325-20131115|13118_1 51 LLDELNEMEEAIKSLEEQIR 70
                 56789************653 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.035
    PF13176.1  11 rlgdyekAielyeraL.altkdpld 34 
                  r+++ e+A +++er+L ++  ++++
  MMETSP1325-20131115|13118_1 125 RRQEKEDAMKALERQLvEILVEQQK 149
                  57899***********999887766 PP

>> PF10950.3  Protein of unknown function (DUF2775)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.6   0.00057      0.24       5      99 ..       2      99 ..       1     101 [. 0.71
   2 ?    2.9   2.3      0.27   1.1e+02      14      90 ..      56     128 ..      47     139 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00057
    PF10950.3  5 eywklvmkDedmpeaiqglLnedskkpskqtkkk.ekeavdefeprpevsaYddndiklkEkkkvvkdfepkpnisaygD...neidkeekkeaiedfE 99
                 e w++ m+D  ++++ + l++++ +  + q + +      d++e r+ +   + n+++    k+  +++  ++n sa  D   n+ ++ +kk   e++E
  MMETSP1325-20131115|13118_1  2 EEWRTQMHDTLVNHKREALVQHKTQSANLQKQLEaVSLERDGLEHRKDKLLDELNEMEEA-IKSLEEQIRQHSNKSAITDgrvNVAHARKKKRLDEEYE 99
                 67*******************885555555444425556799******888777777655.45555667777777777772225667777777777776 PP

  == domain 2    score: 2.9 bits;  conditional E-value: 0.27
    PF10950.3  14 edmpeaiqglLnedskkpskqtkkkekeavdefeprpevs.aYddndiklkEkkkvvkdfepkpnisaygDneidkee 90 
                  ++m+eai++l ++  ++++k+ +++++  v    +++ +   Y+     ++ k+  + d+++k  i+a +D      e
  MMETSP1325-20131115|13118_1  56 NEMEEAIKSLEEQIRQHSNKSAITDGRVNVAHARKKKRLDeEYEVLLEAVHTKRDQISDVDSK--ITACNDRRQ---E 128
                  588999999888778888888888888888887777776557777666667778888888876..555566333...3 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.3   0.00032      0.13      26      81 ..      18      73 ..       8      80 .. 0.85
   2 ?    0.3   0.1       1.3   5.5e+02      54      73 ..      96     115 ..      81     132 .. 0.71
   3 ?    0.2   0.1       1.5   6.2e+02      30      50 ..     128     148 ..     118     155 .. 0.69

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 0.00032
    PF06103.6 26 ktldevnktvkkltkqvdgitketeellaktnelleDvneKvetldpvfqavadlg 81
                 ++l + ++  ++l+kq++ ++ e + l ++ ++ll+++ne  e++ ++ +++ + +
  MMETSP1325-20131115|13118_1 18 EALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHS 73
                 556666777889*********************************99988887655 PP

  == domain 2    score: 0.3 bits;  conditional E-value: 1.3
    PF06103.6  54 aktnelleDvneKvetldpv 73 
                  ++ ++lle v +K  +++ v
  MMETSP1325-20131115|13118_1  96 EEYEVLLEAVHTKRDQISDV 115
                  55667777777777776655 PP

  == domain 3    score: 0.2 bits;  conditional E-value: 1.5
    PF06103.6  30 evnktvkkltkqvdgitkete 50 
                  e ++++k l++q+ +i+ e +
  MMETSP1325-20131115|13118_1 128 EKEDAMKALERQLVEILVEQQ 148
                  566778888888777765544 PP

>> PF05190.13  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.2    0.0024         1       7      33 ..      49      75 ..      43      87 .. 0.89
   2 ?    2.4   0.2      0.37   1.5e+02       2      28 ..     115     141 ..     114     156 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0024
                 HHHHHHHHHHHHHHHHHHCCCCCH--- CS
   PF05190.13  7 delrrkleeleselkellekererlgi 33
                 d+l ++l+e+e+ +k+l+e++r++++ 
  MMETSP1325-20131115|13118_1 49 DKLLDELNEMEEAIKSLEEQIRQHSNK 75
                 899*******************99876 PP

  == domain 2    score: 2.4 bits;  conditional E-value: 0.37
                  TSHHHHHHHHHHHHHHHHHHHHHCCCC CS
   PF05190.13   2 fdeeLdelrrkleeleselkelleker 28 
                  +d+++    ++++e e+ +k l++++ 
  MMETSP1325-20131115|13118_1 115 VDSKITACNDRRQEKEDAMKALERQLV 141
                  567777777777777777777777764 PP

>> PF03234.9  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   9.9    0.0022      0.89      29     164 ..      12     150 ..       9     160 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.0022
    PF03234.9  29 firwkqqaihekreqrkkeieelekelkinkkllervdkllselkeeeelss..ekvlkklneeadkedkasveeeeeeqpkynemledLldqvkdevdekk.aaklieelkkhrkklkkeekelekkleelekeekkk 164
                  ++  k++a ++++ q  + +++le+   + + l +r dkll+el+e ee+ +  e+ +++ +++   +d  ++  + +++ + +e  e Ll+ v+++ d+ +  ++ i++ ++ r++ ++  k le++l e+  e++k+
  MMETSP1325-20131115|13118_1  12 LVNHKREALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKslEEQIRQHSNKSAITDGRVNVAHARKKKRLDEEYEVLLEAVHTKRDQISdVDSKITACNDRRQEKEDAMKALERQLVEILVEQQKR 150
                  6778999999999999999*************************9985433324455555555555777779999999999*************999998776888899999999999999999999998888887776 PP

>> PF04582.7  Reovirus sigma C capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.0    0.0026       1.1      34     154 ..      17     138 ..       6     146 .. 0.78

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0026
    PF04582.7  34 yerltaleaataslsesvssissklsdlsadlqdvtsslddvkaelkelstevaalqssvdslsseladls.elvsahdaalsslqtevdanstdisnlksdvsanglnitdleervksles 154
                  +e l++ ++ +a l++ ++++s +   l+   +++   l++++  +k+l++++++ ++  ++    ++       +  d+    l + v+++  +is+++s+++a      + e+ +k+le 
  MMETSP1325-20131115|13118_1  17 REALVQHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDGRVNVAHaRKKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALER 138
                  56677777778888888888888888888888888899999999999999999888877777776666443034455678888999999999999999999999999999999999999985 PP

>> PF12308.3  Neurogenesis glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.4   0.00065      0.27      40      90 ..      25      75 ..      14      85 .. 0.84
   2 ?    0.8   0.1      0.89   3.7e+02      67      92 ..     102     127 ..      82     137 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00065
    PF12308.3 40 rqlrqllekvqnvsqslevldlrtardlqyvrksetllktlekklksaeen 90
                 +q  +l +++  vs + + l++r  + l++++++e  +k+le+++++ +++
  MMETSP1325-20131115|13118_1 25 TQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNK 75
                 5556778888899999999***************************87654 PP

  == domain 2    score: 0.8 bits;  conditional E-value: 0.89
    PF12308.3  67 lqyvrksetllktlekklksaeenkk 92 
                  l+ v++   ++  +++k+++ ++ ++
  MMETSP1325-20131115|13118_1 102 LEAVHTKRDQISDVDSKITACNDRRQ 127
                  44455555566666666665555544 PP

>> PF03961.8  Protein of unknown function (DUF342)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   3.9    0.0044       1.8     340     412 ..      10      76 ..       3      86 .. 0.66
   2 ?    7.0   1.7    0.0036       1.5     328     400 ..      90     164 ..      81     178 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0044
    PF03961.8 340 eeeleeleeeleklkkklkklpklkaegqlesekkeqleklletkeklkeeleeleaelkelkeeleskkkea 412
                  ++++++ +e l ++k + + l+k      + +  + + + l++ k kl +el+e+e+ +k+l+e+++++++++
  MMETSP1325-20131115|13118_1  10 DTLVNHKREALVQHKTQSANLQK------QLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKS 76 
                  44555556666666666444444......34445677788888888888888888888888888888883332 PP

  == domain 2    score: 7.0 bits;  conditional E-value: 0.0036
    PF03961.8 328 depelkeklkeleeeleeleeeleklkkklkklpklka..egqlesekkeqleklletkeklkeeleeleaelke 400
                  +++ l+e+++ l e ++  ++++ ++++k++ +++ ++  e+++++ +++ +e l e++++l  +l+e  +  k 
  MMETSP1325-20131115|13118_1  90 KKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQekEDAMKALERQLVEILVEQQKRLLGILTEAGRAAKI 164
                  4577889999999999999**********8888886653356677778888888999999998888887666555 PP

>> PF11932.3  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.7   0.00031      0.13      47      98 ..      22      73 ..       5      79 .. 0.89
   2 ?    3.1   1.8      0.11        44      40      85 ..     104     149 ..      76     180 .. 0.56

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00031
    PF11932.3 47 kladqtqellaeieqlqeevenlkvyndqleklvenqqqelaslqeqieeie 98
                 + + q+++l++++e+++ e ++l+  +d+l +++++ ++ ++sl+eqi + +
  MMETSP1325-20131115|13118_1 22 QHKTQSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHS 73
                 56789999****************************************9876 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.11
    PF11932.3  40 qsqkkidkladqtqellaeieqlqeevenlkvyndqleklvenqqq 85 
                  + ++k d+++d   ++ a  ++ qe+ + +k+ ++ql +++ +qq+
  MMETSP1325-20131115|13118_1 104 AVHTKRDQISDVDSKITACNDRRQEKEDAMKALERQLVEILVEQQK 149
                  2333444444444444444444444444444444444444444444 PP

>> PF03730.9  Ku70/Ku80 C-terminal arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4    0.0022      0.91      17      61 ..      29      74 ..      28      98 .. 0.71
   2 ?    1.9   0.3      0.72     3e+02      14      48 ..      93     127 ..      90     174 .. 0.71

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0022
                 HHHHHHHHHHCTTTSXXXXXXCCCHHHHCHHHHHHHHHH.HHHHHH CS
    PF03730.9 17 rhyqvLealaldteeplppldqtlpkeeemkrelrvgke.lekfke 61
                 ++++ Lea++l+ +  ++++d++l++  em++  ++ +e + +  +
  MMETSP1325-20131115|13118_1 29 NLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEqIRQHSN 74
                 57899**************************965555554444444 PP

  == domain 2    score: 1.9 bits;  conditional E-value: 0.72
                  HHHHHHHHHHHHHCTTTSXXXXXXCCCHHHHCHHH CS
    PF03730.9  14 vLqrhyqvLealaldteeplppldqtlpkeeemkr 48 
                  +L++ y+vL++ + + ++++  +d  ++   +  +
  MMETSP1325-20131115|13118_1  93 RLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQ 127
                  58888999988888888888888876654433322 PP

>> PF02465.13  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   1.0     0.029        12       8      50 ..       7      49 ..       5      85 .. 0.70
   2 ?    3.6   0.1      0.18        75      15      50 ..      88     124 ..      78     140 .. 0.70

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.029
   PF02465.13  8 slvkklmaaerapldrlkqqeqkleaklsaygtlksalsdlqs 50
                 ++ + l++ +r  l + k+q ++l+ +l+a++  +  l+  ++
  MMETSP1325-20131115|13118_1  7 QMHDTLVNHKREALVQHKTQSANLQKQLEAVSLERDGLEHRKD 49
                 6778899999999999999999999999998765555555554 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.18
   PF02465.13  15 aaerapl.drlkqqeqkleaklsaygtlksalsdlqs 50 
                  a ++++l ++++   +++ +k+++++++ s++++ ++
  MMETSP1325-20131115|13118_1  88 ARKKKRLdEEYEVLLEAVHTKRDQISDVDSKITACND 124
                  5566666777777788888888888888888887665 PP

>> PF12644.2  Protein of unknown function (DUF3782)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.6     0.048        20       4      34 ..      56      97 ..      16     123 .. 0.75
   2 ?    7.3   0.8    0.0085       3.5       4      38 ..     127     158 ..     124     179 .. 0.87

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.048
    PF12644.2  4 atkqdkafatkedLkelear..........atkedvkrle.a 34
                  ++++ ++ ++e+++++ ++          a  + +krl+ +
  MMETSP1325-20131115|13118_1 56 NEMEEAIKSLEEQIRQHSNKsaitdgrvnvAHARKKKRLDeE 97
                 334445666666666665559999999999777777777743 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0085
    PF12644.2   4 atkqdkafatkedLkelearatkedvkrleayina 38 
                  ++k+d  +a++ +L e+   + ++++++l+ + +a
  MMETSP1325-20131115|13118_1 127 QEKEDAMKALERQLVEI---LVEQQKRLLGILTEA 158
                  6899*************...*********966555 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.1    0.0085       3.5      10      26 ..      51      67 ..      50      70 .. 0.87
   2 ?    1.2   0.0      0.87   3.6e+02      12      32 ..      89     109 ..      88     111 .. 0.86
   3 ?   -1.9   0.0       8.2   3.4e+03      17      26 ..     129     138 ..     125     140 .. 0.73

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0085
                 HHHHTT-HHHHHHHHH- CS
    PF13181.1 10 iYrqlGdydkAkeylek 26
                 ++ +l+++++A+++le+
  MMETSP1325-20131115|13118_1 51 LLDELNEMEEAIKSLEE 67
                 6789************9 PP

  == domain 2    score: 1.2 bits;  conditional E-value: 0.87
                  HHTT-HHHHHHHHH---HHHH CS
    PF13181.1  12 rqlGdydkAkeylekalelkp 32 
                  r++++ d+ +e l +a+  k+
  MMETSP1325-20131115|13118_1  89 RKKKRLDEEYEVLLEAVHTKR 109
                  68999***********97776 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 8.2
                  HHHHHHHHH- CS
    PF13181.1  17 ydkAkeylek 26 
                  ++ A+++le+
  MMETSP1325-20131115|13118_1 129 KEDAMKALER 138
                  6778888875 PP

>> PF14282.1  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   4.7   0.00037      0.15      25      73 ..      24      75 ..       9      93 .. 0.79
   2 ?    1.3   1.0      0.71   2.9e+02      26      61 ..     103     134 ..      83     150 .. 0.58

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00037
    PF14282.1 25 qkqiqsltkqlkelssdeeltaeekq...kqqqliqqQIqalqaQiaqlqsq 73
                 ++q ++l+kql+ +s +++  + +k       +++++ I++l+ Qi+q+  +
  MMETSP1325-20131115|13118_1 24 KTQSANLQKQLEAVSLERDGLEHRKDkllDELNEMEEAIKSLEEQIRQHSNK 75
                 6789999999999998866555555422367778899***********9765 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.71
    PF14282.1  26 kqiqsltkqlkelssdeeltaeekqkqqqliqqQIq 61 
                  + + +   q++++ s+ ++ ++++q++++++    +
  MMETSP1325-20131115|13118_1 103 EAVHTKRDQISDVDSKITACNDRRQEKEDAM----K 134
                  5555556677777776666666666555443....2 PP

>> PF03962.10  Mnd1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   5.6    0.0028       1.1      69     135 ..      11      76 ..       3      90 .. 0.80
   2 ?    5.0   3.2     0.037        16      63     112 ..      90     140 ..      87     180 .. 0.72

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0028
   PF03962.10  69 teleklkkeleelkqrikelqaeiekekkkreeteeree.lleelkeleeelkklkkeleklakldpe 135
                  t +++ ++ l + k++ ++lq+++e+   +r+  e r++ ll+el+e+ee +k+l+++++  ++++++
  MMETSP1325-20131115|13118_1  11 TLVNHKREALVQHKTQSANLQKQLEAVSLERDGLEHRKDkLLDELNEMEEAIKSLEEQIR--QHSNKS 76 
                  455666778889999999*********9999999888777*******************9..444444 PP

  == domain 2    score: 5.0 bits;  conditional E-value: 0.037
   PF03962.10  63 akkklkteleklkkeleelkqrikelqaeiekekkkreeteereelle.el 112
                  +kk+l +e+e l + ++  + +i++++ +i + + +r+e+e+  ++le +l
  MMETSP1325-20131115|13118_1  90 KKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALErQL 140
                  577888999999999999999999999999999999999966555433032 PP

>> PF07439.6  Protein of unknown function (DUF1515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.3    0.0067       2.8       6      66 ..      51     122 ..      42     136 .. 0.69
   2 ?    0.4   0.2       1.2   4.8e+02      15      48 ..     110     147 ..     101     160 .. 0.56

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0067
    PF07439.6   6 vlqqlgtllaevkelredlkrsedrsd.......asrakmyrkmde....lvervtalegsvvklkaditsv 66 
                  +l +l+++   +k l e++++  ++s+       ++ a+ ++++de    l+e v++    ++ +++ it+ 
  MMETSP1325-20131115|13118_1  51 LLDELNEMEEAIKSLEEQIRQHSNKSAitdgrvnVAHARKKKRLDEeyevLLEAVHTKRDQISDVDSKITAC 122
                  67889999999********97666665111111145566667777655556677777777777777777765 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 1.2
    PF07439.6  15 aevkelredlk....rsedrsdasrakmyrkmdelver 48 
                   ++ ++  ++     r +++ da++a   + ++ lve+
  MMETSP1325-20131115|13118_1 110 DQISDVDSKITacndRRQEKEDAMKALERQLVEILVEQ 147
                  34444444444333345556666666666666666665 PP

>> PF10211.4  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   6.6    0.0013      0.55     119     188 ..      45     114 ..       5     115 .. 0.93
   2 ?    5.6   3.1     0.027        11     117     183 ..      86     152 ..      81     158 .. 0.88
   3 ?    2.8   1.3      0.19        79     123     158 ..     113     148 ..     105     181 .. 0.54

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.0013
    PF10211.4 119 eqgkselekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadeiaflkkqnqqlkseleq 188
                  e++k++l +e +++ee +++Le+++++  +k + ++ r +  ++ ++k+ ++e + l ++ +++++++ +
  MMETSP1325-20131115|13118_1  45 EHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDGRVNVAHARKKKRLDEEYEVLLEAVHTKRDQISD 114
                  78899*******************************************************9999999875 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.027
    PF10211.4 117 eaeqgkselekeikkleeekeeLekevkelekkleeiekreeeereeeekkhadeiaflkkqnqqlk 183
                      +k++l++e + l e ++  ++++ ++++k+ + + r +e++++ +   ++ ++ l +q+++l 
  MMETSP1325-20131115|13118_1  86 AHARKKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALERQLVEILVEQQKRLL 152
                  56678999999**********************************9999999999999999998875 PP

  == domain 3    score: 2.8 bits;  conditional E-value: 0.19
    PF10211.4 123 selekeikkleeekeeLekevkelekkleeiekree 158
                  s+++++i++ +++++e e+  k le++l ei  +++
  MMETSP1325-20131115|13118_1 113 SDVDSKITACNDRRQEKEDAMKALERQLVEILVEQQ 148
                  333333333333333333333333333333322222 PP

>> PF13600.1  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   5.5      0.11        47      50     100 ..      34      83 ..       3      92 .. 0.74
   2 ?    5.3   2.6     0.056        23      51      99 ..      79     125 ..      73     152 .. 0.68

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.11
    PF13600.1  50 vlsvsvrrrdlqekdadaaseelaeleaelraledelarleaekealeari 100
                  +  vs++r+ l+ +  d+  +el e e+++++le+++++ +++ ++ ++r 
  MMETSP1325-20131115|13118_1  34 LEAVSLERDGLE-HRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDGRV 83 
                  566777777665.55667777777888888888888877777777766655 PP

  == domain 2    score: 5.3 bits;  conditional E-value: 0.056
    PF13600.1  51 lsvsvrrrdlqekdadaaseelaeleaelraledelarleaekealear 99 
                  ++ +v  ++++  + +  +ee + l +++++ +d+++ ++++++a + r
  MMETSP1325-20131115|13118_1  79 TDGRVNVAHAR--KKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDR 125
                  55555555544..346677777777777777777777777777666544 PP

>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   2.3     0.018       7.5      31      81 ..      31      80 ..       6      91 .. 0.52
   2 ?    6.5   4.2     0.024        10       8      69 ..      56     126 ..      48     147 .. 0.82

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.018
    PF09177.6 31 stsskelkeltke.LenalesiewdledLeeavsvveknpekfglseeeisr 81
                 + ++ e+ +l+++ Le   +++  +l+++eea++  e++ ++ + +++ i++
  MMETSP1325-20131115|13118_1 31 Q-KQLEAVSLERDgLEHRKDKLLDELNEMEEAIKSLEEQIRQ-HSNKSAITD 80
                 2.3334433333225666666666666666666666655555.455555554 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.024
    PF09177.6   8 eevqksidkleslyrsweelrsdst.........sskelkeltkeLenalesiewdledLeeavsvveknp 69 
                  +e +++i++le+ +r++++    ++         ++k+l+e ++ L +a+++ + +++d++  +++ ++ +
  MMETSP1325-20131115|13118_1  56 NEMEEAIKSLEEQIRQHSNKSAITDgrvnvaharKKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRR 126
                  46677777788888777777777779999****999****************************9966554 PP

>> PF07889.7  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   1.7     0.027        11      48      94 ..      26      72 ..       4      85 .. 0.71
   2 ?    7.6   5.0    0.0065       2.7      40     125 ..      57     146 ..      55     148 .. 0.85

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.027
    PF07889.7 48 vtkqlekvseavasakkhLsqridnlddkldeqkeiskeikeevtei 94
                  + +l+k  eav   +  L +r d+l d+l+e +e +k+ +e++ + 
  MMETSP1325-20131115|13118_1 26 QSANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQH 72
                 45667777777777788888888888888888888888888877664 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0065
    PF07889.7  40 nladAvasvtkqlekvse..avasakkhLs..qridnlddkldeqkeiskeikeevteiredlsaikedvkslkqvvegLeskleslesk 125
                  ++++A++s+ +q+ + s+  a+++ + +++  ++ ++ld++ +   e +++ ++++ ++ ++++a ++  ++ ++++++Le +l ++  +
  MMETSP1325-20131115|13118_1  57 EMEEAIKSLEEQIRQHSNksAITDGRVNVAhaRKKKRLDEEYEVLLEAVHTKRDQISDVDSKITACNDRRQEKEDAMKALERQLVEILVE 146
                  79***********998752268888888762257788999999999999999*******************************9998655 PP

>> PF03670.8  Uncharacterised protein family (UPF0184)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   1.5    0.0041       1.7      29      75 ..      28      74 ..       7      81 .. 0.83
   2 ?    2.0   0.5      0.49     2e+02      35      61 ..     116     142 ..      95     162 .. 0.70

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0041
    PF03670.8 29 eainsmLDqinsaLDalEernDdlnskLrELlesnRqiRlefaeqld 75
                 +++   L++++   D lE+r+D+l   L+E+ e+ +    +++++ +
  MMETSP1325-20131115|13118_1 28 ANLQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSN 74
                 567788999*********************99988888888877655 PP

  == domain 2    score: 2.0 bits;  conditional E-value: 0.49
    PF03670.8  35 LDqinsaLDalEernDdlnskLrELle 61 
                    +i ++ D   e++D +++  r L+e
  MMETSP1325-20131115|13118_1 116 DSKITACNDRRQEKEDAMKALERQLVE 142
                  345778888889999988775555554 PP

>> PF10186.4  UV radiation resistance protein and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   9.3    0.0018      0.75      32     142 ..      13     119 ..       5     121 .. 0.88
   2 ?    3.6   0.8     0.057        24      76     121 ..     109     155 ..     107     163 .. 0.85

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.0018
    PF10186.4  32 lkaeketlkkkveealeeaenekklaaqqlklevaskkerieqirkrieqlkeeieqkrerieelkealaqrrsdle.asaqlekrraeqlaklqeeikrtksklnsleslt 142
                  +++++e+l ++ ++  +      ++++++ +le+   ++r +++ + + + +e+i+++ e+i++ +++ a    +++ a+a ++kr+ e+ + l+e+++ +++++  ++s++
  MMETSP1325-20131115|13118_1  13 VNHKREALVQHKTQSAN-----LQKQLEAVSLERDGLEHRKDKLLDELNEMEEAIKSLEEQIRQHSNKSAITDGRVNvAHARKKKRLDEEYEVLLEAVHTKRDQISDVDSKI 119
                  45566666666666666.....9999*****************************************************************************999888875 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.057
    PF10186.4  76 rkrieqlkeeieqkrerieelkealaqrrsdle.asaqlekrraeql 121
                  r++i+   ++i +++ r++e+++a++ + ++l     +++kr+  +l
  MMETSP1325-20131115|13118_1 109 RDQISDVDSKITACNDRRQEKEDAMKALERQLVeILVEQQKRLLGIL 155
                  67999999999**************9999999988888888876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1785  (0.130559); expected 273.4 (0.02)
Passed bias filter:                      753  (0.0550761); expected 273.4 (0.02)
Passed Vit filter:                       119  (0.00870392); expected 13.7 (0.001)
Passed Fwd filter:                        51  (0.00373025); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              33  [number of targets reported over threshold]
# CPU time: 1.06u 0.41s 00:00:01.47 Elapsed: 00:00:00.72
# Mc/sec: 609.07
//
Query:       MMETSP1325-20131115|13133_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       330  (0.0241369); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 434.06
//
Query:       MMETSP1325-20131115|13137_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       138  (0.0100936); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.55
# Mc/sec: 318.06
//
Query:       MMETSP1325-20131115|13142_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-16   58.6   6.8    2.9e-06   26.5   0.1    4.0  4  PF02205.15 WH2 motif
    1.3e-06   28.6   0.0    1.3e-06   28.6   0.0    2.8  2  PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF02205.15  WH2 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1   4.2e-10   2.9e-06       2      28 ..      49      73 ..      48      75 .. 0.81
   2 !   16.7   0.0   5.4e-07    0.0037       7      26 ..      88     106 ..      82     110 .. 0.86
   3 !   17.2   0.0   3.6e-07    0.0025       6      27 ..     121     140 ..     116     143 .. 0.82
   4 ?   -1.1   0.1      0.21   1.4e+03       2      11 ..     150     159 ..     149     159 .. 0.85

  Alignments for each domain:
  == domain 1    score: 26.5 bits;  conditional E-value: 4.2e-10
   PF02205.15  2 gggRsALLsdIrkGgkiqLKKvaetnd 28
                 + g++ LL++I++ +k  LKK+  +  
  MMETSP1325-20131115|13142_1 49 PTGNNNLLAQIQASKK--LKKTQPPEK 73
                 7899**********66..****65555 PP

  == domain 2    score: 16.7 bits;  conditional E-value: 5.4e-07
   PF02205.15   7 ALLsdIrkGg.kiqLKKvaet 26 
                  +L+++I++Gg    LKKv+ +
  MMETSP1325-20131115|13142_1  88 DLMAQIKAGGsG--LKKVKPR 106
                  69********88..****655 PP

  == domain 3    score: 17.2 bits;  conditional E-value: 3.6e-07
   PF02205.15   6 sALLsdIrkGg.kiqLKKvaetn 27 
                  ++L+++I++Gg    L+Kv ++ 
  MMETSP1325-20131115|13142_1 121 ADLMAQIKAGGsG--LRKV-KPR 140
                  79*********88..****.765 PP

  == domain 4    score: -1.1 bits;  conditional E-value: 0.21
   PF02205.15   2 gggRsALLsd 11 
                  +gg++ LL++
  MMETSP1325-20131115|13142_1 150 TGGGGGLLAE 159
                  7999999996 PP

>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0     2e-10   1.3e-06     117     147 ..       2      32 ..       1      33 [. 0.96
   2 ?   -4.8   6.5         2   1.4e+04      67      95 ..      39      74 ..      34     171 .. 0.67

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 2e-10
    PF10152.4 117 akYfkmlklgVpaeavknKmqaeGldpelld 147
                  akY kml + +p  av +Km+a+Gldp+lld
  MMETSP1325-20131115|13142_1   2 AKYQKMLDMHLPRGAVEQKMRADGLDPRLLD 32 
                  69****************************9 PP

  == domain 2    score: -4.8 bits;  conditional E-value: 2
    PF10152.4 67 rrsggpppppg.......araeaaaqeaeaaraetp 95
                  +sg+ pppp+       a+ +a+ + ++ +++e+ 
  MMETSP1325-20131115|13142_1 39 DSSGALPPPPPtgnnnllAQIQASKKLKKTQPPEKR 74
                 455666666663444433222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.34s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 841.07
//
Query:       MMETSP1325-20131115|13146_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-36  123.5  10.7    2.4e-36  123.3   7.4    1.0  1  PF01780.14 Ribosomal L37ae protein family
     0.0041   16.5   4.5      0.006   16.0   1.7    2.0  2  PF02977.10 Carboxypeptidase A inhibitor
  ------ inclusion threshold ------
       0.17   11.5  12.6       0.13   11.9   1.4    2.5  2  PF02892.10 BED zinc finger
       0.28   11.0   4.5          3    7.6   3.1    2.0  1  PF01927.11 Protein of unknown function DUF82
       0.38   10.4   8.9        1.4    8.6   6.2    1.9  1  PF12760.2  Transposase zinc-ribbon domain
        1.6    9.0   7.8        1.8    8.9   4.4    1.8  2  PF13842.1  DDE_Tnp_1-like zinc-ribbon
        1.7    8.9   8.1        6.3    7.1   0.4    2.8  3  PF13465.1  Zinc-finger double domain
        3.8    8.0   7.1         20    5.7   0.1    3.2  3  PF00096.21 Zinc finger, C2H2 type
        5.6    6.7   7.2         17    5.1   1.4    2.3  2  PF13005.2  putative Helix-turn-helix domain of transposase IS66


Domain annotation for each model (and alignments):
>> PF01780.14  Ribosomal L37ae protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.3   7.4   1.6e-39   2.4e-36       2      87 ..       9      94 ..       8      97 .. 0.97

  Alignments for each domain:
  == domain 1    score: 123.3 bits;  conditional E-value: 1.6e-39
                 XXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHSXEEXSTXXXEEEEES----EEETTTTEEE-----SSS-HHHHHHHHXXXXXXX CS
   PF01780.14  2 krtkkvGiagrfGaRYGaslrkrvkkievkqkakykCpfcgkkavkRkavgiWkckkckkkfaGgaytpeteaaktvrstirrlre 87
                 +rtkkvGi+g++G+RYGaslrk +kk+e++q++ky+C  cgk++vkR +vgiWkck+ckk++aGgayt++t+aa+tvr++  rlr+
  MMETSP1325-20131115|13146_1  9 RRTKKVGICGKYGTRYGASLRKVIKKMEITQHSKYNCVHCGKDNVKRDCVGIWKCKSCKKVYAGGAYTLNTAAAATVRTATARLRK 94
                 69********************************************************************************9986 PP

>> PF02977.10  Carboxypeptidase A inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.34   5.2e+02       3      12 ..      12      21 ..      10      24 .. 0.78
   2 !   16.0   1.7   3.9e-06     0.006      13      38 ..      52      76 ..      43      83 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.34
   PF02977.10  3 nilgtCnkyC 12
                 + +g+C ky 
  MMETSP1325-20131115|13146_1 12 KKVGICGKYG 21
                 5689**9995 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 3.9e-06
   PF02977.10 13 ntnsDCsgitlCqwCdkltktgeGyv 38
                 n++ DC+gi+ C  C k+   g+ y+
  MMETSP1325-20131115|13146_1 52 NVKRDCVGIWKCKSC-KKVYAGGAYT 76
                 7899***********.5555566565 PP

>> PF02892.10  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   2.7     0.022        33      12      25 ..      38      51 ..      19      57 .. 0.85
   2 ?   11.9   1.4   8.3e-05      0.13      12      31 ..      56      77 ..      51      82 .. 0.79

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.022
   PF02892.10 12 gkkqkarCkyCgki 25
                 +++ k  C +Cgk+
  MMETSP1325-20131115|13146_1 38 TQHSKYNCVHCGKD 51
                 678999******96 PP

  == domain 2    score: 11.9 bits;  conditional E-value: 8.3e-05
   PF02892.10 12 gkkqkarCkyCgkilsrg..kn 31
                 ++ + ++Ck C+k++++g  + 
  MMETSP1325-20131115|13146_1 56 DCVGIWKCKSCKKVYAGGayTL 77
                 67889************85544 PP

>> PF01927.11  Protein of unknown function DUF82
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.1     0.002         3     116     138 ..      52      74 ..       5      83 .. 0.71

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.002
   PF01927.11 116 kvyeeadeftrCtkCrkvyWkGs 138
                  +v++    +++C++C+kvy +G+
  MMETSP1325-20131115|13146_1  52 NVKRDCVGIWKCKSCKKVYAGGA 74 
                  333334449**********8886 PP

>> PF12760.2  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   6.2   0.00091       1.4      18      45 ..      42      68 ..      29      69 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00091
    PF12760.2 18 gfvCphCgsreayriktrglyqCkeCrk 45
                 ++ C hCg++ + r    g ++Ck+C+k
  MMETSP1325-20131115|13146_1 42 KYNCVHCGKDNVKRDC-VGIWKCKSCKK 68
                 578*****86555544.69*******97 PP

>> PF13842.1  DDE_Tnp_1-like zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       3.2   4.9e+03      24      28 ..      14      18 ..       9      24 .. 0.65
   2 ?    8.9   4.4    0.0012       1.8       2      24 ..      44      68 ..      43      71 .. 0.91

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 3.2
    PF13842.1 24 vpLCq 28
                 v++C 
  MMETSP1325-20131115|13146_1 14 VGICG 18
                 56664 PP

  == domain 2    score: 8.9 bits;  conditional E-value: 0.0012
    PF13842.1  2 rCkvCkkknprke..trysCkkCpv 24
                 +C+ C k n++++   ++ Ck+C++
  MMETSP1325-20131115|13146_1 44 NCVHCGKDNVKRDcvGIWKCKSCKK 68
                 8**********************63 PP

>> PF13465.1  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       2.1   3.2e+03      19      25 ..      16      22 ..      14      23 .. 0.78
   2 ?    7.1   0.4    0.0042       6.3      10      22 ..      38      50 ..      32      51 .. 0.84
   3 ?    5.6   0.5     0.013        20      15      24 ..      61      70 ..      53      71 .. 0.87

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 2.1
    PF13465.1 19 lCgktFk 25
                 +Cgk+ +
  MMETSP1325-20131115|13146_1 16 ICGKYGT 22
                 6**9865 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0042
    PF13465.1 10 tgekpyeCplCgk 22
                 t+  +y C +Cgk
  MMETSP1325-20131115|13146_1 38 TQHSKYNCVHCGK 50
                 67789*******9 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.013
    PF13465.1 15 yeCplCgktF 24
                  +C+ C+k++
  MMETSP1325-20131115|13146_1 61 WKCKSCKKVY 70
                 69******98 PP

>> PF00096.21  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.58   8.8e+02       5      13 ..      16      24 ..      15      30 .. 0.76
   2 ?    3.6   0.7     0.061        93       1       8 [.      43      50 ..      43      51 .. 0.92
   3 ?    5.7   0.1     0.013        20       2      10 ..      62      70 ..      61      74 .. 0.89

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.58
                 ----EESSH CS
   PF00096.21  5 dCgksFsrk 13
                 +Cgk  +r 
  MMETSP1325-20131115|13146_1 16 ICGKYGTRY 24
                 7**998775 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.061
                 EE------ CS
   PF00096.21  1 yqCpdCgk 8 
                 y C +Cgk
  MMETSP1325-20131115|13146_1 43 YNCVHCGK 50
                 89*****9 PP

  == domain 3    score: 5.7 bits;  conditional E-value: 0.013
                 E------EE CS
   PF00096.21  2 qCpdCgksF 10
                 +C+ C+k++
  MMETSP1325-20131115|13146_1 62 KCKSCKKVY 70
                 8******98 PP

>> PF13005.2  putative Helix-turn-helix domain of transposase IS66
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   1.4     0.012        17      39      51 ..      39      51 ..      16      58 .. 0.82
   2 ?    4.7   0.5     0.016        24      39      52 ..      57      76 ..      52      89 .. 0.70

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.012
    PF13005.2 39 irpkyaCrcCere 51
                 +  ky C +C+++
  MMETSP1325-20131115|13146_1 39 QHSKYNCVHCGKD 51
                 5579******976 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.016
    PF13005.2 39 irpkyaCrcCere......t 52
                   + ++C++C++       t
  MMETSP1325-20131115|13146_1 57 CVGIWKCKSCKKVyaggayT 76
                 56789*****9665555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       857  (0.0626829); expected 273.4 (0.02)
Passed bias filter:                      554  (0.0405208); expected 273.4 (0.02)
Passed Vit filter:                        63  (0.00460796); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.42u 0.39s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 452.65
//
Query:       MMETSP1325-20131115|13145_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-51  172.8   0.0    1.3e-50  172.2   0.0    1.2  1  PF00632.20 HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> PF00632.20  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.2   0.0   9.8e-55   1.3e-50      38     314 ..      85     430 ..      54     432 .] 0.85

  Alignments for each domain:
  == domain 1    score: 172.2 bits;  conditional E-value: 9.8e-55
                  ---TTHHHHHHH-------TTT--------B-HHHHHHHT.T----CCHHHTT-HHHHHHHHHHH..HS--GG.........................GT-BSEE.EEE----E...............................EEEES.-------B--TTTHHHHHHHHHHHHHTGGGHHHHHHHH---TTTS-HHHHTTS-HHHHHHHH-----.--HHHHHHTEEEE----...TTSHHHHHHHHHHHTS-HHHHHHHHHHH----S------TT--......--EEEEE--..........-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHT.---- CS
   PF00632.20  38 essndnlklfkflGkligkaiyegilldlpfsraflkflllgkkvtledleeidpelanslkellelesstea......................vedlaltFtieedkkedei...............................elvel.ipnGanipVtnenkeeYiklyvnyllkesvkkqleafrkGfseviptealklftpeelellicGsdklidvedlrrnteydggyn...ansptienlweilkefspeerrlfLkFvTGssrlPlgGfaelh......pkftivrks.........ededrLPtasTCfnyLkLpdYsskeilkekLltAieegqegFe 314
                   s +  l+ f f G+l +ka++e++++ lp+++++lk ll g++v l+dl+  d+ la sl +l +    + a                      +e+l+l++++++  ++ +i                                 ++  +   +  pV  ++++ Yi+  v ++l   v++q++af  Gf++++p   +++ +  el+ll+ G++  idv+d+ ++t+y g y+   + +++i+++w++++++sp e+r++L+F TGss+ P++Gf  l+      ++fti+  s         + +  +  a+TCfn L+Lp+Y ++e+l+  L t +   ++gF 
  MMETSP1325-20131115|13145_1  85 ASARFVLDRFSFCGRLFAKALLEQQTMTLPLAPSLLKILL-GVPVGLDDLSREDSALAASLLWLDQNCGRRRAtqgeqapqnadeacdesstnevLESLGLDWSVTTAWGD-TIplpgphspaamaaaevrgglfeataaavaavADHDGsVSSHEFPPVRASEVDAYIRARVRWHLLGAVAPQVHAFVVGFHSICPWWVVSVADHAELSLLVNGRKS-IDVKDWAASTQYLGSYRrkgQGHRVIKWFWNVVESLSPMEQRRLLQFATGSSQPPALGFGLLTsndgspRRFTIESISyststfgasDRSGPFIRAHTCFNKLDLPEYHDEEQLRAALATILALDSTGFT 430
                  333445778*******************************.************************6665555599999****************99999999997654433.33566666666666666666666666655544322333345558889***********************************************************.*****************888889*************************************99999***999**9999999999997555557**************************999888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       271  (0.0198215); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.63
# Mc/sec: 1643.22
//
Query:       MMETSP1325-20131115|13153_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 313.70
//
Query:       MMETSP1325-20131115|13157_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.68
# Mc/sec: 429.93
//
Query:       MMETSP1325-20131115|13155_1  [L=224]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.40s 00:00:00.90 Elapsed: 00:00:00.51
# Mc/sec: 1052.52
//
Query:       MMETSP1325-20131115|13156_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.38s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 1607.56
//
Query:       MMETSP1325-20131115|13159_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-09   38.5   0.1    1.5e-09   38.1   0.1    1.3  1  PF05517.7 p25-alpha


Domain annotation for each model (and alignments):
>> PF05517.7  p25-alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.1   1.1e-13   1.5e-09      83     137 ..      78     134 ..      36     151 .. 0.75

  Alignments for each domain:
  == domain 1    score: 38.1 bits;  conditional E-value: 1.1e-13
    PF05517.7  83 elkeklvaeksPavsg..atkadavrfltDkskYTGvhkerfdesgkgkgisgrsdl 137
                  +   +++++++    +  a++ +  ++ltD+s+Y G+hk+rfd+ g+g+g++gr+++
  MMETSP1325-20131115|13159_1  78 QYDAEILEAAQQRQAAapAQSGNIFDRLTDTSTYSGTHKHRFDADGHGRGLAGRDQV 134
                  444455433333333347888999******************************654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       386  (0.0282329); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 901.24
//
Query:       MMETSP1325-20131115|13166_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       309  (0.0226009); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 336.41
//
Query:       MMETSP1325-20131115|13167_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       505  (0.0369368); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 440.93
//
Query:       MMETSP1325-20131115|13168_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-11   41.6   0.0    6.6e-11   41.6   0.0    1.0  1  PF04192.7 Utp21 specific WD40 associated putative domain


Domain annotation for each model (and alignments):
>> PF04192.7  Utp21 specific WD40 associated putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   4.8e-15   6.6e-11     153     204 ..      10      58 ..       2      62 .. 0.88

  Alignments for each domain:
  == domain 1    score: 41.6 bits;  conditional E-value: 4.8e-15
    PF04192.7 153 kepleelvaFikaltarLkskkdFeLvqaylavflklHgdviveeeeeeelr 204
                  +++l  l  Fi+ l+arL++++dFe+vqay+  flk+H +vi  + +   l+
  MMETSP1325-20131115|13168_1  10 EAGLALLGRFISWLKARLSTHTDFEVVQAYMHRFLKVHSEVIAGNGD---LK 58 
                  56788899**********************************98876...55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 274.49
//
Query:       MMETSP1325-20131115|13176_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 170.51
//
Query:       MMETSP1325-20131115|13181_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       103  (0.00753365); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 343.63
//
Query:       MMETSP1325-20131115|13182_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       261  (0.0190901); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 415.69
//
Query:       MMETSP1325-20131115|13188_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.40s 00:00:00.67 Elapsed: 00:00:00.53
# Mc/sec: 158.25
//
Query:       MMETSP1325-20131115|13189_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.036   14.3   0.8      0.046   14.0   0.5    1.3  1  PF12168.3  DNA polymerase III subunits tau domain IV DnaB-binding
      0.095   12.3   0.6       0.29   10.8   0.1    1.8  2  PF00938.12 Lipoprotein


Domain annotation for each model (and alignments):
>> PF12168.3  DNA polymerase III subunits tau domain IV DnaB-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.5   6.7e-06     0.046      12      63 ..       8      57 ..       2      76 .. 0.85

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 6.7e-06
    PF12168.3 12 tktKKseaasakkartSvLeRlAqvqgrtervsqrqaaksaeekekkeeaYR 63
                  k+KK+ + +akk    v+e lA+ +g+t+   +  ++++  ++   +++Y+
  MMETSP1325-20131115|13189_1  8 IKVKKNAPKPAKK--RNVMEQLAASHGTTTALVEMHIDEAVMKQLITNQKYQ 57
                 589*********9..99********998888777778888888888888886 PP

>> PF00938.12  Lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.12   8.5e+02      17      39 ..       9      31 ..       2      38 .. 0.63
   2 ?   10.8   0.1   4.3e-05      0.29      16      48 ..      44      76 ..      33      78 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.12
   PF00938.12 17 dasknielsegkknlitsLkksY 39
                 +++kn      k+n+ + L  s 
  MMETSP1325-20131115|13189_1  9 KVKKNAPKPAKKRNVMEQLAASH 31
                 45555555566777777776665 PP

  == domain 2    score: 10.8 bits;  conditional E-value: 4.3e-05
   PF00938.12 16 ldasknielsegkknlitsLkksYesnpkkttk 48
                   + k+  +++  ++l+ + k s ++np+kt+k
  MMETSP1325-20131115|13189_1 44 EAVMKQLITNQKYQELVRAGKMSVKVNPDKTVK 76
                 5677889999999******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       891  (0.0651697); expected 273.4 (0.02)
Passed bias filter:                      702  (0.0513458); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.43s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 489.05
//
Query:       MMETSP1325-20131115|13190_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       195  (0.0142627); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|13191_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   12.3   0.1       0.18   11.4   0.0    1.5  1  PF10062.4 Predicted secreted protein (DUF2300)


Domain annotation for each model (and alignments):
>> PF10062.4  Predicted secreted protein (DUF2300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.3e-05      0.18       7      95 ..     108     194 ..     103     196 .. 0.85

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.3e-05
    PF10062.4   7 egelsWraasaqagagirrDaiLvrafpraslglyfePlrlecsalpwaqdWlarqapawlrdlerlspytevpvkevckllegrPaqd 95 
                  + ++sWr+ s++ag  ++   iL +     +  l  e   + c+a++ a++  a  a+   ++ + l+pyt+vp++ v+   + +P+++
  MMETSP1325-20131115|13191_1 108 ASRVSWRMLSTEAGVLKATGIILPQRMKPGNYKLVVED--IYCQAAADAEAAAAADARPVAPQAAGLEPYTPVPLAPVSIPFSVTPYEA 194
                  56899*********999999999996666666666666..558888888888899*******************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       479  (0.0350351); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 907.85
//
Query:       MMETSP1325-20131115|13196_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.74
# Mc/sec: 229.92
//
Query:       MMETSP1325-20131115|13197_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00079   19.6   1.5    0.00079   19.6   1.1    2.2  2  PF00428.14 60s Acidic ribosomal protein
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.016   15.0   0.0    1.2  1  PF13474.1  SnoaL-like domain
      0.088   13.1   0.1       0.12   12.6   0.1    1.4  1  PF12680.2  SnoaL-like domain


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   1.1      0.16   7.5e+02      51      57 ..       5      11 ..       2      14 .. 0.40
   2 !   19.6   1.1   1.7e-07   0.00079      48      75 ..     132     159 ..     102     160 .] 0.79

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.16
   PF00428.14 51 aaaaaaa 57
                 aaaaaaa
  MMETSP1325-20131115|13197_1  5 AAAAAAA 11
                 2222222 PP

  == domain 2    score: 19.6 bits;  conditional E-value: 1.7e-07
   PF00428.14  48 aaaaaaaaaaaaaaaaaaaeeekkeeee 75 
                  + +a +a+aa+a+aaa+ +e+ekkee +
  MMETSP1325-20131115|13197_1 132 PFSAGPAPAAPAKAAAPVKEAEKKEEVK 159
                  5678899999999999999999999865 PP

>> PF13474.1  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   3.6e-06     0.016      55     120 ..      68     133 ..      60     134 .. 0.76

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 3.6e-06
    PF13474.1  55 ktepis.feledvrvtvsgdvawvteeldlqakadgseaegqvrgtgvl.rktdggWkivhyhlSvpa 120
                  ++++++ ++++++++  +gd+a++    d ++++  +   ++v  t+ + r +dg+ +i  +h+Svp+
  MMETSP1325-20131115|13197_1  68 GGKGWKnVVFSNHQIDLNGDTAIAMGSYDFTCAT--TGDVATVEYTFGYrRCEDGKPRIMLHHSSVPF 133
                  456664156799************9998887743..3445667666665267999************8 PP

>> PF12680.2  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   2.7e-05      0.12      49      98 ..      71     121 ..      19     125 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 2.7e-05
                  CEECEEEEEEEEESSTTEEEEEEEEE-EESBS--EEEEEEEEEEEE.---- CS
    PF12680.2  49 afpdlrfevedviadgdrvvvrwtvtgtipptgrgvtvrgvdvfrv.edGk 98 
                   + ++ f+ +++  +gd++++ + ++ t + tg+  tv+++  +r  edGk
  MMETSP1325-20131115|13197_1  71 GWKNVVFSNHQIDLNGDTAIAMGSYDFTCATTGDVATVEYTFGYRRcEDGK 121
                  567889999************98888888*********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.54
# Mc/sec: 710.03
//
Query:       MMETSP1325-20131115|13203_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-14   50.6   0.9      1e-13   50.2   0.6    1.2  1  PF02953.10 Tim10/DDP family zinc finger
    0.00043   19.6   0.3    0.00057   19.2   0.2    1.2  1  PF05811.8  Eukaryotic protein of unknown function (DUF842)


Domain annotation for each model (and alignments):
>> PF02953.10  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.6   1.5e-17     1e-13      12      62 ..      42      96 ..      34     103 .. 0.92

  Alignments for each domain:
  == domain 1    score: 50.2 bits;  conditional E-value: 1.5e-17
   PF02953.10 12 naqelvnkltekCfkkCvtk....ypgseLskgeesCldrCvekyldvnnlvskr 62
                 ++q+ +++l+ +CfkkCv+     y++++Ls ge +C+drCv+ky ++ + + ++
  MMETSP1325-20131115|13203_1 42 QFQDEFQRLSLSCFKKCVSAqkhpYTEADLSLGEMQCVDRCVAKYVQTKKELLET 96
                 799********************************************99877665 PP

>> PF05811.8  Eukaryotic protein of unknown function (DUF842)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.2   8.4e-08   0.00057      65     125 ..      35      95 ..      28     101 .. 0.85

  Alignments for each domain:
  == domain 1    score: 19.2 bits;  conditional E-value: 8.4e-08
    PF05811.8  65 lveselekfqdrLqrclmeCqdklkdklasnknesdaakelerCvnkcvdkhvkllpelvk 125
                  + +++  +fqd +qr   +C +k+ ++ ++  +e d++    +Cv +cv k v++ +el++
  MMETSP1325-20131115|13203_1  35 VAKTDAWQFQDEFQRLSLSCFKKCVSAQKHPYTEADLSLGEMQCVDRCVAKYVQTKKELLE 95 
                  55678889*****************999999999999995558999999999999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 522.41
//
Query:       MMETSP1325-20131115|13207_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 203.46
//
Query:       MMETSP1325-20131115|13208_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       129  (0.00943534); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.49
# Mc/sec: 268.98
//
Query:       MMETSP1325-20131115|13210_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   13.9   1.2      0.044   13.6   0.4    1.5  2  PF11492.3 Cricket paralysis virus, VP4


Domain annotation for each model (and alignments):
>> PF11492.3  Cricket paralysis virus, VP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.29     4e+03      15      18 ..      12      15 ..       4      20 .. 0.43
   2 ?   13.6   0.4   3.2e-06     0.044      16      45 ..      23      54 ..      21      60 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.29
    PF11492.3 15 kvas 18
                 + +s
  MMETSP1325-20131115|13210_1 12 SGLS 15
                 2222 PP

  == domain 2    score: 13.6 bits;  conditional E-value: 3.2e-06
    PF11492.3 16 vastVsevasalssiPviGeiaka..vswvsd 45
                  astV+ + ++++ iPv G+ +++  +++vs+
  MMETSP1325-20131115|13210_1 23 GASTVKHGPGVVKAIPVAGPAFSKipPAYVSK 54
                 69*******************99888899986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        81  (0.00592452); expected 273.4 (0.02)
Passed bias filter:                       77  (0.00563195); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 298.41
//
Query:       MMETSP1325-20131115|13215_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|13219_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 256.75
//
Query:       MMETSP1325-20131115|13221_1  [L=194]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.8e-18   64.5   0.0    1.1e-17   64.1   0.0    1.1  1  PF00450.17 Serine carboxypeptidase
     0.0026   17.4   1.1     0.0036   17.0   0.8    1.3  1  PF05887.6  Procyclic acidic repetitive protein (PARP)


Domain annotation for each model (and alignments):
>> PF00450.17  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.0   1.6e-21   1.1e-17     325     416 ..       5      93 ..       2      95 .. 0.94

  Alignments for each domain:
  == domain 1    score: 64.1 bits;  conditional E-value: 1.6e-21
                  HHHHHHTT--EEEEE----STT-----HHHHCC--STTHHHHHHS--BBTT-SB---EEEETTEEEEE-------HHHH-HHHHHHHHHHHH CS
   PF00450.17 325 lekllesglrvliysGdvDlicnflgteawikklnlsgkkefrpwevsledgqvaGyvkeyrnltfltvkgaGHmvpedqPeaalqmikrfl 416
                  l + l++g+ v++y+G++Dl+cn+ g  ++  +l++sg++ f++++     +  +G+v++y++l++ +v gaGHmvp dqP++a++ i++ +
  MMETSP1325-20131115|13221_1   5 LARALDAGIDVSFYYGKNDLACNYKGGYDVATTLEWSGAEAFKSAPL---VQVPGGQVQKYGGLAWHQVDGAGHMVPLDQPSNAYNAISELV 93 
                  56789999***************************************...8**********************************9998876 PP

>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.8   5.3e-07    0.0036      87     120 ..     117     150 ..      95     180 .. 0.59

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 5.3e-07
    PF05887.6  87 eeetepeeeeepepepetepepepepepepepep 120
                   ee+epe ++ pepe e++p+   + +   e e 
  MMETSP1325-20131115|13221_1 117 VEEPEPESKPGPEPETESQPDQGQDEHAGKELEG 150
                  3444444444444444444444333333334443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 968.53
//
Query:       MMETSP1325-20131115|13226_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-06   27.9   0.0    1.6e-06   27.7   0.0    1.0  1  PF01435.13 Peptidase family M48


Domain annotation for each model (and alignments):
>> PF01435.13  Peptidase family M48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   1.1e-10   1.6e-06     145     219 ..      14      80 .]       2      80 .] 0.89

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 1.1e-10
                  xxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF01435.13 145 liv...ellqllllalSRkqEyqADeagvklgkkkdllaralyklseavkalaklakdnlgkvvsdkllsellsTHPp 219
                  +++    +l ++l+  SR +E++AD+++  lg++ dl           ++ l k+  +nl+  + d  +s +++THPp
  MMETSP1325-20131115|13226_1  14 VWApvdSVLNFVLTLHSRHKEFSADQYSTNLGYNADL-----------QQGLVKMSIENLSILDPDPVYSLYHHTHPP 80 
                  3337778999**************************9...........*****************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 375.90
//
Query:       MMETSP1325-20131115|13228_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       86  (0.00629023); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 407.38
//
Query:       MMETSP1325-20131115|13220_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-27   95.6   0.0    4.2e-27   95.2   0.0    1.2  1  PF00504.16 Chlorophyll A-B binding protein
  ------ inclusion threshold ------
       0.27   11.1   0.2       0.27   11.1   0.1    2.7  3  PF07043.8  Protein of unknown function (DUF1328)


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.2   0.0   6.1e-31   4.2e-27       4     155 ..      40     186 ..      37     187 .. 0.84

  Alignments for each domain:
  == domain 1    score: 95.2 bits;  conditional E-value: 6.1e-31
                  XXXXXXXXXXX.XXXXXX.---..-TTTTT--------TTT------------------S--TT--.STT--.-...-.---S-TT.THHHH---HHHHHHHHTT-----------------------------------STTT----TTTTT------- CS
   PF00504.16   4 eldgslpgdlg.fDplglskdp..tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeag.g...l.slptllalqillligflelareqelkapesegsekraypGglgfdplglakdeeekaelklkEiknGRlAMiaflgfvvqa 155
                  el g ++ +lg +Dp g+ +++  +++r r++E +HGR+AM+av+G +++e++++++++ ++++ +++++   g   + ++p ++++qi+++ig++e+  + ++            y G+ g   +g + + eek  + + E++nGR+AM ++lg ++ +
  MMETSP1325-20131115|13220_1  40 EL-G-CTRPLGvWDPQGFITKEpeKFARRRAVERKHGRIAMVAVVGLITHEAGIEFPGYLSKTNDLKFSDVRdGiygIlDVPPAGIAQIIIFIGLIETVVWDGF-----------NYSGDYGTGYFGKSLEGEEKVAKLNIELNNGRAAMAGILGAMADE 186
                  55.5.788999********55458*******************************99999988888888744234332359999999***********999998...........3778888888887877788888899****************9976 PP

>> PF07043.8  Protein of unknown function (DUF1328)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.7       1.2   8.5e+03       4      10 ..       5      11 ..       4      12 .. 0.72
   2 ?   11.1   0.1   3.9e-05      0.27      23      39 .]     121     137 ..     119     137 .. 0.92
   3 ?   -1.6   0.8      0.37   2.5e+03       7      15 ..     174     182 ..     174     184 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 1.2
    PF07043.8  4 lviAlvA 10
                 ++iAl A
  MMETSP1325-20131115|13220_1  5 AIIALLA 11
                 4788876 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 3.9e-05
    PF07043.8  23 agiAkiLFfiflvlfvv 39 
                  agiA+i++fi+l+ +vv
  MMETSP1325-20131115|13220_1 121 AGIAQIIIFIGLIETVV 137
                  89**********98887 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.37
    PF07043.8   7 AlvAgvlGF 15 
                  A+ Ag+lG 
  MMETSP1325-20131115|13220_1 174 AAMAGILGA 182
                  778999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.33s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 1121.93
//
Query:       MMETSP1325-20131115|13227_1  [L=313]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-15   55.3   0.9    1.4e-06   27.8   0.0    2.2  2  PF01963.12 TraB family


Domain annotation for each model (and alignments):
>> PF01963.12  TraB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0     1e-10   1.4e-06      11      59 ..      58     105 ..      48     146 .. 0.79
   2 !   26.0   0.1   3.5e-10   4.8e-06     172     242 ..     217     289 ..     199     302 .. 0.83

  Alignments for each domain:
  == domain 1    score: 27.8 bits;  conditional E-value: 1e-10
   PF01963.12  11 eiyLlGTaHvsdkslepvrkaiekalekadavvvEl...eeasakalaklpe 59 
                   + L+GTaHvs+ks   vr++i++   +++av+vEl   +   ++++a++++
  MMETSP1325-20131115|13227_1  58 DVFLVGTAHVSEKSGFLVRSVIDA--TQPKAVMVELcseR--ATVLKAQQAQ 105
                  489*********************..**********7442..3333333333 PP

  == domain 2    score: 26.0 bits;  conditional E-value: 3.5e-10
   PF01963.12 172 sdelseelveawkegdl.eelmeelaedkaspelyevlldeRnrywaeklk.ellkgg..gkvvvVVGagHlpGe 242
                   +++++  +e  k+ +l +e++e++      p++ e+ll+ R+  + +k+  ell++   g  vvVVG +H+ G 
  MMETSP1325-20131115|13227_1 217 VEKMTQIFAEVIKDRQLvREMVEIVGM--VAPDVLEALLHSRDDFMFKKMCgELLAASngGASVVVVGLAHMDGL 289
                  566666677888889999999999999..****************9999988666666678***********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       419  (0.0306466); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 1630.56
//
Query:       MMETSP1325-20131115|13237_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-07   31.2   0.3    1.7e-07   30.8   0.2    1.1  1  PF05347.10 Complex 1 protein (LYR family)
    2.2e-05   24.7   0.0    2.8e-05   24.4   0.0    1.1  1  PF13233.1  Complex1_LYR-like
    2.5e-05   24.3   0.2    2.7e-05   24.1   0.1    1.2  1  PF13232.1  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> PF05347.10  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.2   3.7e-11   1.7e-07       2      40 ..       6      44 ..       5      47 .. 0.87

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 3.7e-11
   PF05347.10  2 qvLsLYRalLRaa.rkfpdynareyirrriReeFrknknv 40
                 +++sLYR++LR+  rk+p++ +r    +++ eeFr+++ +
  MMETSP1325-20131115|13237_1  6 RAISLYRRILREHrRKLPYE-MRMLGDKYVGEEFRRHRGE 44
                 689**********6666666.5***************985 PP

>> PF13233.1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   6.2e-09   2.8e-05       2      73 ..       8      69 ..       7      74 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 6.2e-09
    PF13233.1  2 lrlYRellrelrk...yerrlnahkfnaeyeqgdkylrenarrefashasln.deeqareflqeaenylafleaqr 73
                 ++lYR++lre r+   ye r           +gdky+     +ef++h++      +  +f +e+e y+ +le+q 
  MMETSP1325-20131115|13237_1  8 ISLYRRILREHRRklpYEMR----------MLGDKYV----GEEFRRHRGEEeGGSFLPKFFAEWERYVSMLEQQT 69
                 79**********74433332..........79*****....*********998667999***************95 PP

>> PF13232.1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.1     6e-09   2.7e-05       2      40 ..       6      44 ..       5      66 .. 0.84

  Alignments for each domain:
  == domain 1    score: 24.1 bits;  conditional E-value: 6e-09
    PF13232.1  2 qvLsLYRalLrearrfpsyssreyfrrriRdeFrknknv 40
                 +++sLYR++Lre rr   y  r     ++ +eFr+++ +
  MMETSP1325-20131115|13237_1  6 RAISLYRRILREHRRKLPYEMRMLGDKYVGEEFRRHRGE 44
                 789**********99888****434788******99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 401.02
//
Query:       MMETSP1325-20131115|13240_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|13241_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      135  (0.0098742); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|13243_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 430.46
//
Query:       MMETSP1325-20131115|13248_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.46s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 280.33
//
Query:       MMETSP1325-20131115|13249_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       380  (0.027794); expected 273.4 (0.02)
Passed bias filter:                      364  (0.0266238); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.45s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 301.94
//
Query:       MMETSP1325-20131115|13250_1  [L=218]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-13   49.3   0.0    2.1e-12   46.9   0.0    1.9  1  PF09229.6 Activator of Hsp90 ATPase, N-terminal
  ------ inclusion threshold ------
        1.6    8.9   4.9        3.3    7.9   3.4    1.5  1  PF10659.4 Trypanosome variant surface glycoprotein C-terminal domain


Domain annotation for each model (and alignments):
>> PF09229.6  Activator of Hsp90 ATPase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   3.1e-16   2.1e-12       1     132 [.      53     216 ..      53     218 .] 0.81

  Alignments for each domain:
  == domain 1    score: 46.9 bits;  conditional E-value: 3.1e-16
                  -EE-HHHHHHHHHHHHHT-EE.E-SSE...EEEEEEEE.EE-EEEEEE----EEEEEEEEEEEEEEEEETT---EE----EEEEEEECC.CCTT----EE................................--SS-SHHHHHHHHTTTT---HHHHHHHTTHHHHHH CS
    PF09229.6   1 eKdatkwakeklkellknlkvkedees...kikitevskveGdasvsqrKGKkiflfelklklewegekkeeeekkvkGtveipelsse.neeedyeiei................................kvtdkkkeskelkallkkklvpkireklkkfvkeLk 132
                  e+d+t  a+++l+el+ + +v  d++     +++t  + ++G as  +rKGK+i  fe+ +k+++eg+   +     + tv+  +l ++ +e+   e+++                                + +     s+ l +l+ kk++p +re++   ++eL+
  MMETSP1325-20131115|13250_1  53 ERDCTGFATDRLRELVVGSEVWRDKKVegdVLSVTGAE-LDGYASSCVRKGKTINTFEFTVKVTFEGR-RGGG--ALHATVTYADLVRDgSEDPNAEVTVpvgvveskasavsdsnssldkdgnvvqtavpvSSERAMRCSEMLLKLVTKKGEPMLREQIAVVMRELL 216
                  8*****************99866666633345555555.99***************************.4444..489999999999997899999999999999999988888888888888888777765555555555559999999999999999999999987 PP

>> PF10659.4  Trypanosome variant surface glycoprotein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.4   0.00049       3.3      17      75 ..       2      57 ..       1      61 [. 0.66

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00049
                 EE--S-----.EEE-GGGSS--XXXXXXXXXXXSSXTTT.XXXXXXSX.XTSEEXXXXEE CS
    PF10659.4 17 kydkkeeekk.CklkeekkekkekeaqetateekttekckkkkdkkdckkeckWegneck 75
                 k++ +e ++  C++ ++ +++ + +a+e++++++t+ + +++k     +++++We+  c 
  MMETSP1325-20131115|13250_1  2 KWTRQERDQRiCEPPKKLEAADAMAAAEAEASSATA-QASESK--W-NTNDYHWEERDCT 57
                 79966666666***9999999998766666533333.332222..2.23579*****996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      281  (0.020553); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 1088.35
//
Query:       MMETSP1325-20131115|13262_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 217.45
//
Query:       MMETSP1325-20131115|13267_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00023   21.3   0.0    0.00034   20.8   0.0    1.2  1  PF00005.22 ABC transporter
     0.0094   15.0   0.0       0.01   14.9   0.0    1.1  1  PF02463.14 RecF/RecN/SMC N terminal domain


Domain annotation for each model (and alignments):
>> PF00005.22  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0     5e-08   0.00034      94     117 ..      12      35 ..      12      36 .. 0.95

  Alignments for each domain:
  == domain 1    score: 20.8 bits;  conditional E-value: 5e-08
                  -HHHHHHHHHHTT--SEEEEESTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00005.22  94 qkqrvalArallkkpklllLDEPt 117
                  +kqrva+Ar++l++++++lLDE t
  MMETSP1325-20131115|13267_1  12 EKQRVAIARLVLSEAPVVLLDEFT 35 
                  79********************87 PP

>> PF02463.14  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.5e-06      0.01     153     184 ..      20      51 ..      13      55 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.5e-06
                  HHTSS--SEEEESSTTTT--HHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF02463.14 153 iqkvkpaplyllDeidaaLDeknvskvaellk 184
                      + ap++llDe+ +aLD++ +s++ e l+
  MMETSP1325-20131115|13267_1  20 RLVLSEAPVVLLDEFTSALDANTRSEIIENLR 51 
                  4556899*****************99988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 257.39
//
Query:       MMETSP1325-20131115|13255_1  [L=347]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.33s 00:00:00.94 Elapsed: 00:00:00.47
# Mc/sec: 1769.23
//
Query:       MMETSP1325-20131115|13268_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-15   55.6   0.7    4.8e-15   55.5   0.5    1.0  1  PF00530.13 Scavenger receptor cysteine-rich domain


Domain annotation for each model (and alignments):
>> PF00530.13  Scavenger receptor cysteine-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.5   3.5e-19   4.8e-15      22      91 ..       2      67 ..       1      69 [] 0.84

  Alignments for each domain:
  == domain 1    score: 55.5 bits;  conditional E-value: 3.5e-19
                 EEBTT--S--CGHHHHHHTT-.-EEE----SS-S........-TTTCEEE-------SSE..EE--SSS-SB CS
   PF00530.13 22 tvcddswdleeanvvCrqLgc.sgaasassssssagas.kgeillsnvrCsgnessLseCkhsasgksncsh 91
                 tvcdd+wd+ +a+v+C++Lg+ sg   +++ +     +    il++++ Csg+essL +C + ++g++nc h
  MMETSP1325-20131115|13268_1  2 TVCDDEWDDVDATVACQELGFdSGTGYRHGGN-----GdGMDILADDIACSGKESSLLDC-SGSWGSENCGH 67
                 8********************55544443333.....33788******************.8999999**87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|13264_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-28   98.1   1.6    2.4e-28   97.8   1.1    1.1  1  PF01221.13 Dynein light chain type 1


Domain annotation for each model (and alignments):
>> PF01221.13  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   1.1   1.7e-32   2.4e-28       3      86 ..      17     100 ..      15     103 .. 0.96

  Alignments for each domain:
  == domain 1    score: 97.8 bits;  conditional E-value: 1.7e-32
                  XXXX-EEETTS-HHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHH-S-EEEE-------EEES--SEEEEEE----EEEEE CS
   PF01221.13   3 egkavvkaadmseemqeeaielaaealekfeeekeiAkhiKkefDkkygptWhcivGksFGsyvthekktfiYfyigklaillf 86 
                   +k++v +++++eem ++a+e +  a+++  +ek+iA+++K efDk+yg+tWhc+vG++FG++vthe+k++++f++++++ llf
  MMETSP1325-20131115|13264_1  17 TRKITVHRMELTEEMVKKAVEKVDIAMDSNAIEKDIATAVKVEFDKEYGGTWHCVVGRHFGCSVTHETKYLVFFQVDQMYALLF 100
                  578999*****************************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       673  (0.0492247); expected 273.4 (0.02)
Passed bias filter:                      516  (0.0377414); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 496.09
//
Query:       MMETSP1325-20131115|13269_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 273.27
//
Query:       MMETSP1325-20131115|13277_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 502.77
//
Query:       MMETSP1325-20131115|13278_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 483.88
//
Query:       MMETSP1325-20131115|13280_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-18   64.2   0.0    7.2e-18   64.1   0.0    1.0  1  PF03054.11 tRNA methyl transferase


Domain annotation for each model (and alignments):
>> PF03054.11  tRNA methyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.0   5.3e-22   7.2e-18      10      92 ..       2      85 .]       1      85 [] 0.96

  Alignments for each domain:
  == domain 1    score: 64.1 bits;  conditional E-value: 5.3e-22
   PF03054.11 10 GVDSsvaalllkeqgyevigvfmknweeedeeg.keccaeedlkdaervaeklgiplevvnfekeykekvfeefleeykkGrTP 92
                 GVDSsva+ +++e+gy   ++++k w e++ ++ ++c++eed+++a++va++ g+ le v+++k+y ++v+ e+l e ++GrTP
  MMETSP1325-20131115|13280_1  2 GVDSSVALRMVQEAGYTPRAFYLKIWLEDELAHlNQCPWEEDWEYATAVAKQAGVALEAVSMQKDYFKRVVGETLVEARAGRTP 85
                 9*************************996655579************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      243  (0.0177736); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 357.35
//
Query:       MMETSP1325-20131115|13281_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   11.2   3.8       0.14   11.6   0.4    2.1  2  PF02814.10 UreE urease accessory protein, N-terminal domain
       0.26   10.7   1.4       0.32   10.5   1.0    1.2  1  PF08854.5  Domain of unknown function (DUF1824)
          1    9.2   7.8        1.4    8.8   5.4    1.2  1  PF02318.11 Rabphilin-3A effector domain N-terminal
        1.6    7.4   6.8        1.8    7.2   4.7    1.1  1  PF04111.7  Autophagy protein Apg6
        1.6    8.7   5.4        1.9    8.5   3.7    1.1  1  PF04891.7  NifQ
        2.6    7.9   9.1        8.8    6.2   6.2    1.8  1  PF07511.6  Protein of unknown function (DUF1525)
        5.1    7.5   8.4        8.8    6.7   5.8    1.6  1  PF12589.3  Methyltransferase involved in Williams-Beuren syndrome


Domain annotation for each model (and alignments):
>> PF02814.10  UreE urease accessory protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.4     7e-05      0.14       8      37 ..      15      45 ..      10      48 .. 0.77
   2 ?    1.1   0.1      0.13   2.6e+02      12      39 ..      49      77 ..      42      82 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 7e-05
   PF02814.10  8 lekadaaa.adtleLtwdertksRlrlttdd 37
                 +++ d++  a  +eL+  er++s+lr+ +  
  MMETSP1325-20131115|13281_1 15 AATGDEEVhAKLIELDDRERRRSMLRAQLAA 45
                 444455545999**************98865 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.13
   PF02814.10 12 daaa.adtleLtwdertksRlrlttddGr 39
                 + ++ a ++  +++e ++ Rl +  d  +
  MMETSP1325-20131115|13281_1 49 ERERvAQEVQAAAEEAERVRLQAIADAEK 77
                 33334777777788888888877666555 PP

>> PF08854.5  Domain of unknown function (DUF1824)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.0   0.00016      0.32       9      51 ..      38      80 ..      28      98 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00016
    PF08854.5  9 elrsapalsaaerkklrqelealaskadwitiGimAdsaeeal 51
                  lr + a ++aer+++ qe++a+a++a+++ +  +Ad+ +ea 
  MMETSP1325-20131115|13281_1 38 MLRAQLAAEQAERERVAQEVQAAAEEAERVRLQAIADAEKEAQ 80
                 5788899999*****************************9996 PP

>> PF02318.11  Rabphilin-3A effector domain N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.4    0.0007       1.4      22      82 ..      35      97 ..      17     100 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0007
   PF02318.11 22 lrakLkaGWsvhtaaaekkrkkeslteeekeiik.kviaraek.lealeqeriGrlvdrLekl 82
                  r+ L+a  +   a+ e+ +++ + ++ee e ++ + ia aek  + +e +r+ r+ ++ e+ 
  MMETSP1325-20131115|13281_1 35 RRSMLRAQLAAEQAERERVAQEVQAAAEEAERVRlQAIADAEKeAQDRESQRLSRILEKKERQ 97
                 4666667666677777777777777888888774499****9835789**********99875 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   4.7   0.00092       1.8      78     148 ..      21      90 ..       9      98 .. 0.72

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.00092
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF04111.7  78 eeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfklkklelekelkslelqleyskrq 148
                  e + +l el++ e+ +  l  +l+ +q+e+e++ +e +   +e ++++l+ +  + e+++ + + +  +r 
  MMETSP1325-20131115|13281_1  21 EVHAKLIELDDRERRRSMLRAQLAAEQAERERVAQEVQAAAEEAERVRLQAIA-DAEKEAQDRESQRLSRI 90 
                  44556667777788888999999999999999999999999999999999885.44444444444444444 PP

>> PF04891.7  NifQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.7   0.00096       1.9      12      82 ..      30     100 ..      20     101 .] 0.87

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00096
    PF04891.7  12 eeaeagkaalaealGlsaeelaallarlfpaalealaaealklaeeleeereeeeedlralLlahrstdse 82 
                   + e++++ l+++l+ +++e +++ +++  aa ea ++  +++a++++e+++ e + l ++L ++++++++
  MMETSP1325-20131115|13281_1  30 DDRERRRSMLRAQLAAEQAERERVAQEVQAAAEEAERVRLQAIADAEKEAQDRESQRLSRILEKKERQERD 100
                  45677899999999**************999999999999999*******************999888776 PP

>> PF07511.6  Protein of unknown function (DUF1525)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.2    0.0045       8.8      17      69 ..      21      72 ..      12      98 .. 0.80

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0045
    PF07511.6 17 elavevyeldaverleeelsaeLpadpqqaeaqarqrlqspewkrlqeqlkka 69
                 e +++++eld+ er  + l a+L a++++ e+ a+++ +++e ++++ +l++ 
  MMETSP1325-20131115|13281_1 21 EVHAKLIELDDRERRRSMLRAQLAAEQAERERVAQEVQAAAE-EAERVRLQAI 72
                 56789*********************9999999998876666.5555555543 PP

>> PF12589.3  Methyltransferase involved in Williams-Beuren syndrome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.8    0.0045       8.8      16      68 ..      46      99 ..      10     101 .] 0.63

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0045
    PF12589.3 16 lgeeee...ededeeeveaekkrrekqrsrrkkkkkkkkkkks.keWIlkKKerrrr 68
                 +++e+e   ++    +  ae+++r + +   +++k+ ++++++  + Il+KKer++r
  MMETSP1325-20131115|13281_1 46 EQAERErvaQEV---QAAAEEAERVRLQAIADAEKEAQDRESQrLSRILEKKERQER 99
                 333333222222...22333333333333444444555555542699********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1950  (0.142627); expected 273.4 (0.02)
Passed bias filter:                      905  (0.0661937); expected 273.4 (0.02)
Passed Vit filter:                       105  (0.00767993); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.46s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 456.66
//
Query:       MMETSP1325-20131115|13282_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       413  (0.0302077); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.42s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 385.30
//
Query:       MMETSP1325-20131115|13283_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 729.10
//
Query:       MMETSP1325-20131115|13279_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-09   37.4   0.1    3.6e-09   36.9   0.0    1.3  1  PF13640.1  2OG-Fe(II) oxygenase superfamily
      5e-07   29.8   0.2    9.4e-07   28.9   0.0    1.5  2  PF03171.15 2OG-Fe(II) oxygenase superfamily
    1.7e-06   27.4   0.1    2.6e-06   26.8   0.1    1.3  1  PF13661.1  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0     8e-13   3.6e-09       2      49 ..      52      98 ..      51     107 .] 0.90

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 8e-13
    PF13640.1  2 qlnrygpggflspHvDnse..sssrrltlllylndpeweeeGGelelyps 49
                 q+ +ygpg+++++H+D+ +   + r+ltlllylnd e   eGGe+++ + 
  MMETSP1325-20131115|13279_1 52 QVVHYGPGQHFGAHHDSAAvgGPMRDLTLLLYLNDVE---EGGETYFPNV 98
                 899**************98***************999...*****99865 PP

>> PF03171.15  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.6   7.3e+03      87      97 ..       8      18 ..       2      20 .. 0.64
   2 !   28.9   0.0   2.1e-10   9.4e-07       3      54 ..      49     102 ..      48     107 .] 0.87

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.6
                 CSEEEEEEEEE CS
   PF03171.15 87 rgeRislaffl 97
                    R+s++ +l
  MMETSP1325-20131115|13279_1  8 HSYRTSSTAWL 18
                 45677777775 PP

  == domain 2    score: 28.9 bits;  conditional E-value: 2.1e-10
                  SEEEEEEEES--E-EEEEEEEESS.....SCEEEEEEE....T--EEEEEE-EESCECECT CS
   PF03171.15   3 eqlrvnrYpppekglglgpHtDne.....nriltillq....ddggglqfrkedkwidvpp 54 
                  e l+v +Y    +g+++g+H+D++      r lt+ll+    ++gg+++f++ d     ++
  MMETSP1325-20131115|13279_1  49 EPLQVVHYG---PGQHFGAHHDSAavggpMRDLTLLLYlndvEEGGETYFPNVD----LKV 102
                  5689*****...***************************************774....333 PP

>> PF13661.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.1   5.7e-10   2.6e-06      17      62 ..      55      95 ..      50      99 .. 0.86

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 5.7e-10
    PF13661.1 17 ratrgdffdpHiDadpsqlgkprflsallYLNedwdadfdGgtlff 62
                 ++++g++f++H D+   ++  +r+l++llYLN   d+++ Gg++ f
  MMETSP1325-20131115|13279_1 55 HYGPGQHFGAHHDSAAVGG-PMRDLTLLLYLN---DVEE-GGETYF 95
                 799*************777.************...8888.666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 557.41
//
Query:       MMETSP1325-20131115|13286_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 309.53
//
Query:       MMETSP1325-20131115|13289_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0021   17.8   2.5      0.076   12.8   1.7    3.0  1  PF13180.1  PDZ domain
      0.003   17.5   2.1      0.014   15.3   0.4    2.6  2  PF00595.19 PDZ domain (Also known as DHR or GLGF)
  ------ inclusion threshold ------
      0.026   13.9   0.5       0.21   10.9   0.4    2.1  1  PF03309.9  Type III pantothenate kinase
       0.12   12.4   1.6        1.3    9.1   0.2    2.6  2  PF07898.8  Protein of unknown function (DUF1676)


Domain annotation for each model (and alignments):
>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   1.7   2.2e-05     0.076       3      69 ..      76     148 ..      24     189 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.2e-05
    PF13180.1   3 iGvsvsqlentrgvlvvsVkessPaakaglkpGDiilkvdgkkvksl.......tdlkslllkkkpGdtvkltv 69 
                  +G+ ++++++ + v +++V++++ a+kagl +G ++ +v  +  ++         d + +  k ++G+tv+l v
  MMETSP1325-20131115|13289_1  76 LGAVLEEDKQ-GNVFIAEVTPGGNADKAGLSKGLELQMVSATFGSDMwnargagLDRVMKAIKVRIGTTVTLVV 148
                  5666666665.9********************877777665555444333333322223333666666666655 PP

>> PF00595.19  PDZ domain (Also known as DHR or GLGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1     0.089     3e+02      13      52 ..      27      72 ..      19      74 .. 0.68
   2 !   15.3   0.4   4.2e-06     0.014       9      48 ..      73     109 ..      67     149 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.089
                 --EEEESSTTS.......SSSEEEEESTTT.HHTTTTSBSTTCEEEEE CS
   PF00595.19 13 Gfslkggsdkr.......dkgifvsevvpg.gaaeagglkeGDkIlsv 52
                 G s+ +    +       d g  v  v +   aa a+  ++GD++++v
  MMETSP1325-20131115|13289_1 27 GASVTRVAPVHgvqggntDYGWGVDVVRKQeRAARAA--EAGDIVVEV 72
                 5555555555555555566777777777886667777..999999987 PP

  == domain 2    score: 15.3 bits;  conditional E-value: 4.2e-06
                  TSH---EEEESSTTSSSSEEEEESTTTHHTTTTSBSTTCE CS
   PF00595.19   9 rgglGfslkggsdkrdkgifvsevvpggaaeagglkeGDk 48 
                  +++lG  l +++     ++f++ev pgg a+++gl++G  
  MMETSP1325-20131115|13289_1  73 PKPLGAVLEEDKQ---GNVFIAEVTPGGNADKAGLSKGLE 109
                  5688999998666...59*********8888888**9955 PP

>> PF03309.9  Type III pantothenate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.4   6.1e-05      0.21       7     126 ..      42     150 ..      38     155 .. 0.61

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 6.1e-05
    PF03309.9   7 GNtrikwalfegeellaedgrieastaasrtadelaellesllkapglekviissVvpeavaalleallkafkeplvvraaaaklgltngydnpeelGaDRwaalvaarellgkpllvvd 126
                  GNt   w++     ++++++r   + +a     e+ ++l ++l++ ++ +v+i+ V p  +a+   +++    e      +   + +  ++ n +  G+DR+++++ +r  +   l+v+d
  MMETSP1325-20131115|13289_1  42 GNTDYGWGVD----VVRKQERAARAAEAGDIVVEVPKPLGAVLEEDKQGNVFIAEVTPGGNADKAGLSKGL--E-----LQMVSATFGSDMWNARGAGLDRVMKAIKVRIGTTVTLVVAD 150
                  7777777777....444455554555555556677777777777777667888888877777777766654..3.....23333555666666677777777777777664444555555 PP

>> PF07898.8  Protein of unknown function (DUF1676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.062   2.1e+02      20      79 ..      49     119 ..      42     128 .. 0.50
   2 ?    9.1   0.2   0.00038       1.3       6      49 ..     129     172 ..     126     187 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.062
    PF07898.8  20 gvelvrngeaaeedveaeerslseads.......eeeeldkllld.....rlerflasHsLqvklpeatgag 79 
                  gv +vr++e a++  ea ++ ++           e+++ + ++++     ++++   s +L++++ +at+ +
  MMETSP1325-20131115|13289_1  49 GVDVVRKQERAARAAEAGDIVVE-VPKplgavleEDKQGNVFIAEvtpggNADKAGLSKGLELQMVSATFGS 119
                  67777777666655554443222.111234444333333333332222224455555666666666666655 PP

  == domain 2    score: 9.1 bits;  conditional E-value: 0.00038
    PF07898.8   6 ldrvldsdsisltdgvelvrngeaaeedveaeerslseadseee 49 
                  ldrv++  +++++  v+lv  + +a+++++a++r +++a +e e
  MMETSP1325-20131115|13289_1 129 LDRVMKAIKVRIGTTVTLVVADAKAQSRKDANSRMSAKARAEKE 172
                  89*******************************98887777333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       926  (0.0677297); expected 273.4 (0.02)
Passed bias filter:                      597  (0.0436659); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.40s 00:00:01.00 Elapsed: 00:00:00.62
# Mc/sec: 815.53
//
Query:       MMETSP1325-20131115|13295_1  [L=450]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-14   54.2   0.0    2.3e-14   53.3   0.0    1.5  1  PF00550.20 Phosphopantetheine attachment site
    5.6e-08   31.8   0.0    8.2e-08   31.3   0.0    1.2  1  PF07993.7  Male sterility protein


Domain annotation for each model (and alignments):
>> PF00550.20  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   3.3e-18   2.3e-14       1      67 []     187     254 ..     187     254 .. 0.95

  Alignments for each domain:
  == domain 1    score: 53.3 bits;  conditional E-value: 3.3e-18
   PF00550.20   1 eklleivaevlg.ldpdeidldtdlfelGlDSllaveliarleeefgveipvedlfelptlaelaayl 67 
                  +++l++v+++ g  +++ id++++l e+GlDSl +++l+ +l++e+ v+++++ l+++pt  +la +l
  MMETSP1325-20131115|13295_1 187 QQVLAAVRSLMGaEADHAIDPHAPLVEYGLDSLGSMQLVLQLRRELEVQLSLTILYDYPTADALAGHL 254
                  6899*******98666999**********************************************997 PP

>> PF07993.7  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   1.2e-11   8.2e-08     153     248 ..      27     122 ..       5     123 .. 0.85

  Alignments for each domain:
  == domain 1    score: 31.3 bits;  conditional E-value: 1.2e-11
    PF07993.7 153 eeederaklkglpntYtqsKalaEklvreasrrsglpv..viiRpsiivgesetGwiegsdlgldgllggvakgvlpeilgdpearldlvpvDyvana 248
                  +  +  ++ +    +Y+qsK ++E lv+ a+ ++++    +i+R + i  +s + + +  d++l++l +g++ ++lp + +d+  +ld +p+D+v  a
  MMETSP1325-20131115|13295_1  27 MLRTSADDAAAARGGYAQSKRVGEILVQVAAAAGHIAGdsAIHRAGLIGPSSASACGNDVDVLLRTLAAGAKLRALPAFASDA--TLDYTPADWVGAA 122
                  55666777778888*****************999998455*************************************999995..7********9766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      162  (0.011849); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.41s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 2114.43
//
Query:       MMETSP1325-20131115|13310_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-10   40.2   0.0    2.6e-10   40.1   0.0    1.0  1  PF13500.1 AAA domain


Domain annotation for each model (and alignments):
>> PF13500.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.0   1.9e-14   2.6e-10       7      69 ..       2      77 ..       1      86 [. 0.87

  Alignments for each domain:
  == domain 1    score: 40.1 bits;  conditional E-value: 1.9e-14
    PF13500.1  7 gtdtgvGKTlvslgLvsalkr.kgnkvgyfKPvqtgle...........sdsdaelvqellglde.theeaeplal 69
                 +t ++vGKT+vsl+L+s l++  g k+g+ KPv+++ +            d+d++l+++ +gl+  ++e+++p ++
  MMETSP1325-20131115|13310_1  2 ATRQHVGKTSVSLALCSGLQKrFGRKLGFIKPVGQEHVpvktcsgermkVDKDVKLIRTHFGLNHmHYEHMSPAII 77
                 6899***************8856999*******9999999999999997799**********99967888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.32s 00:00:00.68 Elapsed: 00:00:00.46
# Mc/sec: 458.43
//
Query:       MMETSP1325-20131115|13300_1  [L=435]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-92  308.2   0.2    6.8e-92  307.9   0.1    1.1  1  PF00026.18 Eukaryotic aspartyl protease
  ------ inclusion threshold ------
      0.014   15.7   0.3        3.1    8.2   0.0    2.9  2  PF13650.1  Aspartyl protease


Domain annotation for each model (and alignments):
>> PF00026.18  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  307.9   0.1   9.9e-96   6.8e-92       1     313 [.      54     359 ..      54     360 .. 0.96

  Alignments for each domain:
  == domain 1    score: 307.9 bits;  conditional E-value: 9.9e-96
                  EEEEEEEE----EEEEEEBE------EEEBTTSSCCGHHTS--B-GGG-TT-EE---B--EE-----EE-EEEEEEEE----EEEEEEEEEEEEE-H..HHHCCTS----B-E--GGG-S-B.---HHHHHHHC--CSSSEEEE---STT----EEE---BCCCEE-EEEEEEBC-SSS-EEEBEEEE----EEEEEEBEEEE-----SEEE-HHHHHHHHHHH--EETS..SEEEETTGG-GS-EEEEETTS-EEEEEGGGGEEEC--STTSEEEESEEETT-.ST--SSEEE--TTGGGEEEEEETTTTEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00026.18   1 eYfgeisiGtpeqkftvifDTGSsdlWVpskkctssackshstydpskSstykkngksfsisYGdgsvsGflsqDtvklggltvkeqefgeatkepg..stflaakfdGilGlgfkeievgetatpvfdtllsqglidepvFsvylnsdaeggelvfGgvDeskykGsltyvpvtkkgywqvelesvtvgdktfcssgcqailDtGTsllalpesivekiakavgaaese.geyvvdCsslsslpdiaftvggkkitvsaselvlkesesasaiCilglqeldv.peegelwiLGdvFlrsaytvfdldnnrvglAe 313
                  +++g is+Gtp q+f+vi DTGSs+lWVpsk+ + +  + + +yd+ +Ssty ++g++f+i+YG+g v G++s+Dtv+l+gl v +++f+e++ ++g    f a kfdGi Gl+f++i+v++ ++++f  l+++g +d+ +Fs+ ln+d+  gel+ GgvDesky+G++++vp++++ yw++el++v+v++ ++++    ai+D+GTsll++p++ +e++aka+ga++   gey+++C++    pd+ f+++g ++t+s +++++ +++     C+++ + ld+  + g+lwiLGdvF+r++y+vfd++n+rvg+A+
  MMETSP1325-20131115|13300_1  54 QFYGVISVGTPAQEFQVIYDTGSSNLWVPSKDLSGN--RGKAKYDHDASSTYTADGSDFAIQYGSGPVAGYYSKDTVSLAGLPVADFQFAEVNDVSGlgAAFSAGKFDGIQGLAFDSISVDG-IPTLFGSLCENGSLDSCMFSFSLNTDE-DGELLIGGVDESKYTGDIAWVPLKQESYWEIELGDVQVDGVSMTNC-STAIVDSGTSLLTGPTEDIEALAKALGARSFIaGEYLINCNAD--APDMDFVINGETYTLSLADYIIPDGNL----CLFAAEGLDIpRPAGPLWILGDVFMRKYYSVFDRENSRVGFAT 359
                  6899***************************99888..7999****************************************************975226899*******************.**************************9.***************************************9966655.67**************************98767********99..**********************98654....**********99*****************************96 PP

>> PF13650.1  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00045       3.1       8      77 ..      66     144 ..      59     166 .. 0.62
   2 ?    4.4   0.0     0.007        48       3      32 ..     236     269 ..     233     280 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00045
    PF13650.1   8 kpvrfllDTGasgtliseelaerl.glkpeeskipvlvsgagg........e.vkarlvrldslkiggltlknvpalvld 77 
                  ++++++ DTG+s++ +++++     g  + +++ + +  +a+g        +   a ++  d+++++gl + +++++ ++
  MMETSP1325-20131115|13300_1  66 QEFQVIYDTGSSNLWVPSKDLSGNrGKAKYDHD-ASSTYTADGsdfaiqygSgPVAGYYSKDTVSLAGLPVADFQFAEVN 144
                  6899*********98887776443144333333.5666777774443333321223344444577777777776666555 PP

  == domain 2    score: 4.4 bits;  conditional E-value: 0.007
    PF13650.1   3 vtingkpv....rfllDTGasgtliseelaerlg 32 
                  v+++g+++    ++++D+G s ++ ++e++e+l 
  MMETSP1325-20131115|13300_1 236 VQVDGVSMtncsTAIVDSGTSLLTGPTEDIEALA 269
                  77888644345689*******9999988777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.37s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 1930.40
//
Query:       MMETSP1325-20131115|13301_1  [L=416]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-43  148.2   0.5    4.3e-43  146.5   0.0    2.1  2  PF00004.24 ATPase family associated with various cellular activities (AAA)
    5.3e-07   29.3   0.2    2.9e-06   26.9   0.0    2.3  2  PF07728.9  AAA domain (dynein-related subfamily)
    1.2e-06   28.4   0.0    3.8e-06   26.8   0.0    1.8  1  PF07724.9  AAA domain (Cdc48 subfamily)
    9.8e-06   25.5   0.0    0.00039   20.4   0.0    2.6  1  PF13401.1  AAA domain
    4.3e-05   23.8   0.0    8.3e-05   22.9   0.0    1.6  1  PF13191.1  AAA ATPase domain
    6.6e-05   23.5   0.0    0.00018   22.1   0.0    1.9  1  PF13207.1  AAA domain
    8.3e-05   21.6   0.0     0.0002   20.3   0.0    1.6  1  PF05496.7  Holliday junction DNA helicase ruvB N-terminus
    0.00035   20.1   0.1    0.00035   20.1   0.1    2.0  1  PF13245.1  Part of AAA domain
     0.0005   19.4   0.0    0.00092   18.5   0.0    1.3  1  PF01695.12 IstB-like ATP binding protein
     0.0012   18.6   0.0     0.0037   17.0   0.0    1.9  1  PF13671.1  AAA domain
     0.0024   17.6   0.0     0.0047   16.6   0.0    1.5  1  PF13173.1  AAA domain
     0.0037   17.1   0.0     0.0074   16.1   0.0    1.5  1  PF13521.1  AAA domain
     0.0039   15.8   0.0     0.0073   14.9   0.0    1.4  1  PF06068.8  TIP49 C-terminus
      0.004   16.6   0.0      0.012   15.0   0.0    1.9  1  PF07726.6  ATPase family associated with various cellular activities (AAA)
     0.0043   16.0   0.0     0.0092   15.0   0.0    1.5  1  PF06414.7  Zeta toxin
     0.0057   16.0   0.1      0.064   12.6   0.0    2.4  2  PF00158.21 Sigma-54 interaction domain
     0.0061   16.7   0.2      0.043   14.0   0.0    2.4  2  PF13238.1  AAA domain
     0.0073   15.3   0.1      0.016   14.2   0.1    1.5  1  PF01078.16 Magnesium chelatase, subunit ChlI
  ------ inclusion threshold ------
      0.011   15.0   0.1      0.055   12.7   0.0    2.1  2  PF13481.1  AAA domain
      0.012   14.7   0.0      0.092   11.8   0.0    2.3  2  PF02562.11 PhoH-like protein
      0.014   14.8   0.1      0.039   13.4   0.0    1.7  2  PF13479.1  AAA domain
       0.02   13.7   0.0      0.039   12.7   0.0    1.4  1  PF05673.8  Protein of unknown function (DUF815)
      0.031   13.9   0.0        1.3    8.6   0.0    2.3  2  PF04851.10 Type III restriction enzyme, res subunit
      0.032   14.2   0.0      0.059   13.4   0.0    1.5  1  PF00910.17 RNA helicase
      0.036   12.8   0.0      0.064   12.0   0.0    1.3  1  PF01057.12 Parvovirus non-structural protein NS1
      0.037   13.7   0.5        0.1   12.3   0.3    1.8  1  PF02185.11 Hr1 repeat
      0.048   12.6   0.0       0.13   11.2   0.0    1.7  1  PF06745.8  KaiC
      0.075   11.7   0.0       0.17   10.5   0.0    1.5  1  PF00931.17 NB-ARC domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.5   0.0   8.9e-46   4.3e-43       1     131 [.     170     302 ..     170     303 .. 0.97
   2 ?   -1.6   0.0       5.3   2.6e+03      30      97 ..     358     383 ..     342     395 .. 0.42

  Alignments for each domain:
  == domain 1    score: 146.5 bits;  conditional E-value: 8.9e-46
                  EEEE-------HHHHHHHHHHCTHEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHH...SS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SSGGGS-HHHHH.TTSCCEEE-- CS
   PF00004.24   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                  vllyGppGtGKTlla+ava++++ +f+++sg+el++ky+ge+++ +relf  a+e a psi+f+DEid+++++r   s++ ++e +r++ +Ll++ldg++  ++ + vi+atnr+d+ld allr gR+drkie++
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFIMAREAA-PSIIFMDEIDSIGSARvdgSEGGDSEVQRTMLELLNQLDGFEPTQN-IKVIMATNRIDTLDAALLRpGRIDRKIEFP 302
                  79******************************************************9.*****************9988899999****************755.****************************98 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 5.3
                  ECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTT CS
   PF00004.24  30 sgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvk 97 
                      +                                          +++++e+ v++ + +  d  +
  MMETSP1325-20131115|13301_1 358 RRIHV------------------------------------------TQEDFEMAVAKVMKKDADSNQ 383
                  22222..........................................233333333344444333333 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   5.9e-09   2.9e-06       1     136 [.     169     290 ..     169     292 .. 0.77
   2 ?   -2.9   0.0       9.1   4.5e+03      89     107 ..     355     373 ..     352     393 .. 0.76

  Alignments for each domain:
  == domain 1    score: 26.9 bits;  conditional E-value: 5.9e-09
                  EEEEE------HHHHHHHGGGGBS--EEEEE--TT--HHHH---B--.........--------G-SEEEEESGGG--.-HHHHHHHHHHHSSEEE..----EEE---.......-EEEEE-SS--.-TT-TTHHHH CS
    PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrdtteedlkgrreiangttslvdsplvraaregeilvlDEverae.sevlnsLlslleerrlllpeggelvkaknddlleknfrviatanpldrslnelspalr 136
                  +vlL GppGtgK+ la+ +a+ + +++  v +       +l++++   +g +  ++  ++     ++i+++DE++ +    v +s     e +r  l+ +++l +++++    +n+ vi+++n+ d     l++al+
  MMETSP1325-20131115|13301_1 169 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGA------ELVQKYIG-EGSRMVRELFIMAREAAPSIIFMDEIDSIGsARVDGSEGGDSEVQRTMLELLNQLDGFEPT----QNIKVIMATNRID----TLDAALL 290
                  59***********************99988765......69999994.4444444444443333899*********995666667777777788888888889999986....4999999999999....6677765 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 9.1
                  HHSSEEE..----EEE--- CS
    PF07728.9  89 leerrlllpeggelvkakn 107
                  l err+++ + ++++ +++
  MMETSP1325-20131115|13301_1 355 LRERRIHVTQEDFEMAVAK 373
                  7789999999999988876 PP

>> PF07724.9  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   7.8e-09   3.8e-06       6     105 ..     170     263 ..     166     283 .. 0.84

  Alignments for each domain:
  == domain 1    score: 26.8 bits;  conditional E-value: 7.8e-09
                  EEEE-------HHHHHHHHHHTT-....--EEEEGGG-------THHHHHHHHHTTT-HHHHT--..-EEEETGGG----------------HHHHHHHH-- CS
    PF07724.9   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqileg 105
                  +ll gp g+Gkt+la+a+a + ++    ++ir+   el +    + + +     ++  + a e    i+++DEid i + +  g++    +Vqr +L +l +
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHTDC----TFIRVSGAELVQ----KYIGEGSRMVRELFIMAREAApsIIFMDEIDSIGSARVDGSEGGDSEVQRTMLELLNQ 263
                  5789*******************8....************....66666666666666666666667************98888888999********9964 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   7.9e-07   0.00039       6      43 ..     169     198 ..     164     283 .. 0.78

  Alignments for each domain:
  == domain 1    score: 20.4 bits;  conditional E-value: 7.9e-07
    PF13401.1   6 ilvvtGesGvGKTtllrrlarqldeeaeaaekarvvfv 43 
                   ++++G++G+GKT+l+r +a+          ++++++v
  MMETSP1325-20131115|13301_1 169 GVLLYGPPGTGKTLLARAVAHHT--------DCTFIRV 198
                  589*****************976........4554444 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   1.7e-07   8.3e-05      20      48 ..     165     192 ..     139     269 .. 0.80

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 1.7e-07
    PF13191.1  20 segsp.lllvtGpsGiGKSsLlrelakpil 48 
                  ++  p  +l++Gp+G+GK+ L+r++a++  
  MMETSP1325-20131115|13301_1 165 AQ--PkGVLLYGPPGTGKTLLARAVAHHTD 192
                  33..348*****************666544 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   3.7e-07   0.00018       2      33 ..     170     203 ..     170     321 .. 0.73

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 3.7e-07
                  E--B--TT---HHHHHHHHHHSTEEEEEGGG..B CS
    PF13207.1   2 iaitGppGsGKsTlakeLaerlglpvlsldd..l 33 
                  ++++GppG+GK+ la+++a + ++  +  +   l
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGaeL 203
                  789********************99887766333 PP

>> PF05496.7  Holliday junction DNA helicase ruvB N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   4.1e-07    0.0002      52     111 ..     169     236 ..     144     243 .. 0.71

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 4.1e-07
    PF05496.7  52 hvllyGpPGlGkttlakiiakelgvelkvtsgPvl.eka.gd...laa...lltnleekdvlfideih 111
                   vllyGpPG Gkt la+ +a+  + ++   sg  l +k  g+   ++    ++++ ++  ++f+dei 
  MMETSP1325-20131115|13301_1 169 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELvQKYiGEgsrMVRelfIMAREAAPSIIFMDEID 236
                  59**********************98766666554144323311122211122333445688888886 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.1   7.1e-07   0.00035      10      35 ..     168     191 ..     161     215 .. 0.82

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 7.1e-07
    PF13245.1  10 npllvvtGgPGtGKTttlaaiiaall 35 
                   + +++ G+PGtGKT +la+++a++ 
  MMETSP1325-20131115|13301_1 168 KG-VLLYGPPGTGKT-LLARAVAHHT 191
                  34.556*********.9999999975 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.9e-06   0.00092      44      70 ..     164     190 ..     157     204 .. 0.89

  Alignments for each domain:
  == domain 1    score: 18.5 bits;  conditional E-value: 1.9e-06
   PF01695.12  44 veqaenlvllGpsGvGKthlAialgve 70 
                  v+q + ++l Gp+G+GKt lA a++++
  MMETSP1325-20131115|13301_1 164 VAQPKGVLLYGPPGTGKTLLARAVAHH 190
                  567789*****************9986 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   7.6e-06    0.0037       2      37 ..     170     207 ..     170     238 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.0 bits;  conditional E-value: 7.6e-06
    PF13671.1   2 vllvGlpGsGKstlaerllkklg..yvrlsqdtlrkrl 37 
                  vll G+pG+GK+ la++++ +++  ++r+s  +l ++ 
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHTDctFIRVSGAELVQKY 207
                  7899*************986666557778777666655 PP

>> PF13173.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   9.7e-06    0.0047       3      73 ..     168     238 ..     166     286 .. 0.74

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 9.7e-06
    PF13173.1   3 kilvitGpRrvGKttllkqlakellkeesilyinlddeelrkladpe..llelfleklkekkkylflDEiqev 73 
                  k ++++Gp ++GKt l++ +a++      ++ ++  +   + + + +  + elf+   +   +++f+DEi  +
  MMETSP1325-20131115|13301_1 168 KGVLLYGPPGTGKTLLARAVAHHTD--CTFIRVSGAELVQKYIGEGSrmVRELFIMAREAAPSIIFMDEIDSI 238
                  6689*************99997766..7777777777444443333355566666654557899******987 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.5e-05    0.0074       2      38 ..     170     211 ..     169     230 .. 0.75

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.5e-05
    PF13521.1   2 ivitGgpstGKTtlleaLaar....gypvv.pEvarevleek 38 
                  + + G+p+tGKT l++a+a +     ++v  +E + +++ e+
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHtdctFIRVSgAELVQKYIGEG 211
                  6799***************99855433344666666665554 PP

>> PF06068.8  TIP49 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.5e-05    0.0073      51      90 ..     168     205 ..     129     219 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.5e-05
    PF06068.8  51 ravLlaGppgtGktalaiaiskelgedvpfvalsgsevys 90 
                  ++vLl GppgtGkt la a+++   +d  f+ +sg+e+  
  MMETSP1325-20131115|13301_1 168 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGAELVQ 205
                  89*******************97..579999999999865 PP

>> PF07726.6  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.5e-05     0.012       2      31 ..     170     199 ..     169     222 .. 0.94

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 2.5e-05
    PF07726.6   2 vllegvPGlaktllvkalakaldlefkriq 31 
                  vll g PG++ktll++a+a++ d++f r+ 
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHTDCTFIRVS 199
                  8999***********************995 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.9e-05    0.0092      14      53 ..     165     203 ..     156     228 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 1.9e-05
    PF06414.7  14 ekpkavllgGqpGAGKtslaellleelaagnivridaDel 53 
                  ++pk vll G+pG GKt la+++   + +  ++r+++ el
  MMETSP1325-20131115|13301_1 165 AQPKGVLLYGPPGTGKTLLARAVAHHT-DCTFIRVSGAEL 203
                  79*********************9998.888888877665 PP

>> PF00158.21  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00013     0.064      21      59 ..     166     201 ..     157     219 .. 0.78
   2 ?    0.5   0.0      0.65   3.2e+02      91     105 ..     224     238 ..     210     283 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00013
                  S-S-EEEE-------HHHHHHHHHTSTTTTS--EEEETT CS
   PF00158.21  21 tdltvlitGesGtGKellAraiheaskrkkkpfvavnca 59 
                  ++  vl+ G  GtGK+llAra+ ++++     f++v  a
  MMETSP1325-20131115|13301_1 166 QPKGVLLYGPPGTGKTLLARAVAHHTD---CTFIRVSGA 201
                  55679***************9965443...455555555 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.65
                  TG----EEEET---- CS
   PF00158.21  91 kadgGtLfLDeigel 105
                  +a  +++f+Dei ++
  MMETSP1325-20131115|13301_1 224 EAAPSIIFMDEIDSI 238
                  677889999999876 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       2.8   1.3e+03      10      39 ..      65      93 ..      25     114 .. 0.67
   2 !   14.0   0.0   8.8e-05     0.043       1      23 [.     170     202 ..     170     279 .. 0.77

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 2.8
    PF13238.1 10 GKtTlakeLaerlgdvlrdlakengleeev 39
                 GKt ++ +   + g+ + dl k+ ++ ++ 
  MMETSP1325-20131115|13301_1 65 GKTKVLVKVNPE-GKYVVDLDKDIDINKCT 93
                 555555555544.55555555555555544 PP

  == domain 2    score: 14.0 bits;  conditional E-value: 8.8e-05
    PF13238.1   1 IlitGtpGvGKtTlakeLaerl..........g 23 
                  +l+ G+pG+GKt la++ a ++           
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHTdctfirvsgaE 202
                  6899**************988766666555441 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1   3.2e-05     0.016      24      42 ..     169     187 ..     161     192 .. 0.86

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 3.2e-05
   PF01078.16  24 nlllvGppGsGKtmlakrl 42 
                   +ll+GppG+GKt+la+++
  MMETSP1325-20131115|13301_1 169 GVLLYGPPGTGKTLLARAV 187
                  689*************987 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   0.00011     0.055      34      58 ..     169     192 ..     152     227 .. 0.83
   2 ?   -1.7   0.0       2.8   1.4e+03     141     169 ..     225     261 ..     206     278 .. 0.60

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 0.00011
    PF13481.1  34 sltllaGapgtGKStlalqlaaava 58 
                  + +ll+G+pgtGK+ la + a +  
  MMETSP1325-20131115|13301_1 169 G-VLLYGPPGTGKTLLARAVAHHTD 192
                  4.79*************99998865 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 2.8
    PF13481.1 141 egpdlvviDtlsrlvggdensnsd........vgavi 169
                    p+++  D ++++ ++ ++++++        + +++
  MMETSP1325-20131115|13301_1 225 AAPSIIFMDEIDSIGSARVDGSEGgdsevqrtMLELL 261
                  3478888888888777755555552222322223333 PP

>> PF02562.11  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00019     0.092      20      41 ..     168     189 ..     157     194 .. 0.85
   2 ?   -0.5   0.0       1.1   5.3e+02      75     114 ..     252     291 ..     226     299 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00019
   PF02562.11  20 divfaiGpaGtGKTylavalav 41 
                  + v++ Gp GtGKT+la a+a 
  MMETSP1325-20131115|13301_1 168 KGVLLYGPPGTGKTLLARAVAH 189
                  568899***********99985 PP

  == domain 2    score: -0.5 bits;  conditional E-value: 1.1
   PF02562.11  75 kvdpylrplydaLkdllgaekvekllekgkievaplafmR 114
                   v+  +  l ++L+ +  +++++ ++ +++i++++ a +R
  MMETSP1325-20131115|13301_1 252 EVQRTMLELLNQLDGFEPTQNIKVIMATNRIDTLDAALLR 291
                  4566677788888889999999999999999999999998 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       7.3   3.6e+03      14      40 ..      64      89 ..      64     126 .. 0.72
   2 ?   13.4   0.0     8e-05     0.039       6      23 ..     170     187 ..     166     197 .. 0.85

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 7.3
    PF13479.1 14 iGKTslaktl..pktlfldleagakavkd 40
                 +GKT ++ ++  +   ++dl+++   +  
  MMETSP1325-20131115|13301_1 64 MGKTKVLVKVnpEGKYVVDLDKD---IDI 89
                 68888888888777888888887...333 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 8e-05
    PF13479.1   6 vliYGkpGiGKTslaktl 23 
                  vl+YG+pG+GKT la+ +
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAV 187
                  89***********99865 PP

>> PF05673.8  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   7.9e-05     0.039      51     115 ..     165     234 ..     115     237 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 7.9e-05
    PF05673.8  51 lpannvLLwGarGtGKSslvkallneyaeegLrl..ievekedlkdlpkivellr...erperfilfvDD 115
                  ++ + vLL+G  GtGK  l +a+ +++  + +r+   e+ ++ + + +++v++l    +++   i+f+D 
  MMETSP1325-20131115|13301_1 165 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVsgAELVQKYIGEGSRMVRELFimaREAAPSIIFMDE 234
                  34568**********************9999888445788888888888877654222556677888886 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.17        84     115     164 ..       8      56 ..       4      80 .. 0.72
   2 ?    8.6   0.0    0.0028       1.3       7      46 ..     140     187 ..     137     238 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.17
   PF04851.10 115 ilttiqklhkaleeeeendeskseslealldefdviiiDEaHrlsakkky 164
                  + ++i +l+  ++e++ ++   ++ +++ l+++  ++  E H+l+++ +y
  MMETSP1325-20131115|13301_1   8 YQSKIDELEIIVREKS-ANLARLTAQRNELNARVRLLREELHHLQEPGSY 56 
                  5566777777766533.33223399999*****************99873 PP

  == domain 2    score: 8.6 bits;  conditional E-value: 0.0028
   PF04851.10   7 yQeeaienllesieke.........dekkrglivmaTGtGKTlvaasli 46 
                   Q++ i++++e   k+         ++ k +l+  + GtGKTl+a + +
  MMETSP1325-20131115|13301_1 140 KQIREIKEVIELPIKHpelfdslgvAQPKGVLLYGPPGTGKTLLARA-V 187
                  5777788888776666899999999999***************9985.3 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   0.00012     0.059       1      59 [.     170     219 ..     170     243 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 0.00012
   PF00910.17   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfg 59 
                  ++lyGp+g+GK++la+ +a         +++d +++r +  + +++Y g+   ++ ++ 
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVA---------HHTDCTFIRVSGAELVQKYIGEGSRMVRELF 219
                  689**************33.........4445556666777777777666666665555 PP

>> PF01057.12  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00013     0.064     117     139 ..     170     192 ..     165     196 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00013
   PF01057.12 117 vwfyGpantGktnlaeaIakavp 139
                  v++yGp+ tGkt la+a a+ ++
  MMETSP1325-20131115|13301_1 170 VLLYGPPGTGKTLLARAVAHHTD 192
                  899****************9876 PP

>> PF02185.11  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   0.00021       0.1      33      61 ..      25      52 ..      12      55 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 0.00021
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF02185.11 33 svlqeaesklreseqkielLkeqLeklqk 61
                   l++ +++++e++ ++ lL+e+L +lq+
  MMETSP1325-20131115|13301_1 25 N-LARLTAQRNELNARVRLLREELHHLQE 52
                 3.8999********************995 PP

>> PF06745.8  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00026      0.13      14      37 ..     162     185 ..     135     191 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00026
    PF06745.8  14 gGipegrvvlitGepGtGKtifal 37 
                   G+ + + vl++G pGtGKt++a 
  MMETSP1325-20131115|13301_1 162 LGVAQPKGVLLYGPPGTGKTLLAR 185
                  58889999*************985 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00035      0.17      18      43 ..     166     191 ..     157     198 .. 0.84

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00035
                  SSEEEEEE-------HHHHHHHTS-S CS
   PF00931.17  18 elkvvglvGmgGvGKttlakqvykde 43 
                  + k v l+G +G GKt la++v ++ 
  MMETSP1325-20131115|13301_1 166 QPKGVLLYGPPGTGKTLLARAVAHHT 191
                  567799****************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       727  (0.0531744); expected 273.4 (0.02)
Passed bias filter:                      586  (0.0428613); expected 273.4 (0.02)
Passed Vit filter:                       115  (0.00841135); expected 13.7 (0.001)
Passed Fwd filter:                        28  (0.00204798); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.94u 0.35s 00:00:01.29 Elapsed: 00:00:00.57
# Mc/sec: 1718.77
//
Query:       MMETSP1325-20131115|13324_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 436.14
//
Query:       MMETSP1325-20131115|13327_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-31  107.3   0.4      3e-31  107.0   0.3    1.1  1  PF10163.4  Transcription factor e(y)2
     0.0026   17.5   0.2     0.0045   16.7   0.1    1.4  1  PF13319.1  Protein of unknown function (DUF4090)
  ------ inclusion threshold ------
       0.07   12.7   0.2      0.083   12.4   0.2    1.1  1  PF02637.13 GatB domain
       0.33   10.4   6.3        4.1    6.9   0.0    3.8  4  PF02037.22 SAP domain


Domain annotation for each model (and alignments):
>> PF10163.4  Transcription factor e(y)2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.0   0.3   8.8e-35     3e-31       2      86 .]      20     104 ..      19     104 .. 0.98

  Alignments for each domain:
  == domain 1    score: 107.0 bits;  conditional E-value: 8.8e-35
    PF10163.4   2 ikskiqqklvesgeyerikklLklrLlesgWrdkvkqlareelkergkdklnvdqLvaevkpkArelVPdevkeellqrikefLd 86 
                  ++++i qkl+e+ge+er+k+ L+++L+e gWrd+++++++e+++++g +k++vd+Lva+++p++r++VPd +k++llqri++fL+
  MMETSP1325-20131115|13327_1  20 VRATIMQKLIETGEKERLKEMLREKLIETGWRDDLREYCKEVIRSKGLEKITVDELVAQITPRGRATVPDHIKADLLQRIRKFLQ 104
                  57899******************************************************************************95 PP

>> PF13319.1  Protein of unknown function (DUF4090)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   1.3e-06    0.0045      33      75 ..      10      52 ..       5      62 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 1.3e-06
    PF13319.1 33 dleakrkrsGvkksmrnrivriGakhldkeelnqllieagfeg 75
                 +++ krk   v+ ++ ++++ +G k   ke l ++lie+g+ +
  MMETSP1325-20131115|13327_1 10 QEDRKRKDEAVRATIMQKLIETGEKERLKEMLREKLIETGWRD 52
                 677899999********************************63 PP

>> PF02637.13  GatB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   2.4e-05     0.083      36      97 ..      16      79 ..       4      94 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.4e-05
   PF02637.13 36 eeskltpeqlaellkliaegkiskkiakevleell.ee.gkspeeiieekgLkqisdeeelekl 97
                 +++ +++  +++l++  +++++ +   ++++e+ + ++  +  +e+i+ kgL++i+ +e + ++
  MMETSP1325-20131115|13327_1 16 KDEAVRATIMQKLIETGEKERLKEMLREKLIETGWrDDlREYCKEVIRSKGLEKITVDELVAQI 79
                 44579999999************************54578889*************75666554 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.11   3.7e+02       9      16 ..      37      44 ..      34      49 .. 0.66
   2 ?    3.0   0.0      0.02        67       7      15 ..      52      60 ..      51      61 .. 0.89
   3 ?    0.4   0.0      0.13   4.4e+02       1       9 [.      67      75 ..      67      78 .. 0.83
   4 ?    6.9   0.0    0.0012       4.1      24      35 .]      92     103 ..      82     103 .. 0.93

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.11
                 HHHHHHHT CS
   PF02037.22  9 LKaeLkkr 16
                 LK++L++ 
  MMETSP1325-20131115|13327_1 37 LKEMLREK 44
                 77777765 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.02
                 HHHHHHHHH CS
   PF02037.22  7 aeLKaeLkk 15
                 ++L++++k+
  MMETSP1325-20131115|13327_1 52 DDLREYCKE 60
                 79*****97 PP

  == domain 3    score: 0.4 bits;  conditional E-value: 0.13
                 HTT--HHHH CS
   PF02037.22  1 lskltVaeL 9 
                 l+k tV+eL
  MMETSP1325-20131115|13327_1 67 LEKITVDEL 75
                 6899****9 PP

  == domain 4    score: 6.9 bits;  conditional E-value: 0.0012
                  HHHHHHHHHHHH CS
   PF02037.22  24 KaeLieRLkehl 35 
                  Ka+L +R++++l
  MMETSP1325-20131115|13327_1  92 KADLLQRIRKFL 103
                  9********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       617  (0.0451287); expected 273.4 (0.02)
Passed bias filter:                      510  (0.0373025); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 540.45
//
Query:       MMETSP1325-20131115|13331_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0056   15.7   0.1     0.0072   15.3   0.0    1.1  1  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   5.3e-07    0.0072     230     257 ..      67      94 ..      56      96 .. 0.86

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 5.3e-07
                  SBHHHHHHHHHHT-SSGGGS--HHHHHH CS
   PF07714.12 230 cpeelyelmkqCweeepeeRptfkelve 257
                    +++ ++m++Cw+++pe+R t+++l+ 
  MMETSP1325-20131115|13331_1  67 LDHRWDTMMMDCWAQKPEDRLTMEQLMG 94 
                  5677889******************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       253  (0.018505); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 889.31
//
Query:       MMETSP1325-20131115|13343_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   14.3  19.6      0.035   14.1  13.6    1.1  1  PF03247.9  Prothymosin/parathymosin family
      0.066   12.6  10.9      0.076   12.4   7.6    1.1  1  PF03066.10 Nucleoplasmin
       0.07   12.2  13.0      0.074   12.1   9.0    1.1  1  PF05432.6  Bone sialoprotein II (BSP-II)
       0.13   11.4  12.3       0.13   11.3   8.6    1.0  1  PF05285.7  SDA1
       0.16   10.9  11.6       0.16   10.9   8.1    1.0  1  PF06213.7  Cobalamin biosynthesis protein CobT
       0.18   12.2   2.6        0.2   12.1   1.8    1.1  1  PF08589.5  Fungal protein of unknown function (DUF1770)
       0.22   11.0   8.8       0.22   11.0   6.1    1.1  1  PF04546.8  Sigma-70, non-essential region
       0.29   10.5   6.5        0.3   10.4   4.5    1.1  1  PF03286.9  Pox virus Ag35 surface protein
       0.36    9.3  10.4       0.36    9.3   7.2    1.0  1  PF10446.4  Protein of unknown function (DUF2457)
       0.36    9.8   7.3       0.35    9.8   5.1    1.1  1  PF01056.13 Myc amino-terminal region
       0.51   10.2   6.3       0.55   10.1   4.3    1.1  1  PF08432.5  Fungal protein of unknown function (DUF1742)
       0.53    7.9  12.3       0.52    8.0   8.5    1.0  1  PF04147.7  Nop14-like family
       0.53    9.0   7.5       0.63    8.8   5.2    1.0  1  PF04177.7  TAP42-like family
       0.59    9.2   7.0        0.6    9.1   4.8    1.1  1  PF06524.7  NOA36 protein
       0.67    9.1   8.5       0.73    9.0   5.9    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
       0.69    9.8   9.3       0.66    9.8   6.4    1.1  1  PF11081.3  Protein of unknown function (DUF2890)
       0.71    9.5  12.0       0.85    9.3   8.3    1.1  1  PF05887.6  Procyclic acidic repetitive protein (PARP)
       0.77    7.5   8.2       0.69    7.7   5.7    1.0  1  PF02724.9  CDC45-like protein
       0.78    9.4   6.8          1    9.0   4.7    1.1  1  PF08595.6  RXT2-like, N-terminal
       0.99    8.0   4.8       0.98    8.0   3.3    1.0  1  PF01698.11 Floricaula / Leafy protein
        1.2    6.8   7.2        1.2    6.8   5.0    1.0  1  PF05642.6  Sporozoite P67 surface antigen
        1.3    7.3  12.3        1.3    7.3   8.6    1.0  1  PF03344.10 Daxx Family
        1.7    7.2  11.1        1.6    7.2   7.7    1.0  1  PF03985.8  Paf1
        1.8    8.0   4.1          2    7.9   2.8    1.1  1  PF06088.6  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
        2.1    8.5  14.7        2.6    8.2  10.2    1.2  1  PF09026.5  Centromere protein B dimerisation domain
        2.2    7.0   6.6        2.3    6.9   4.6    1.0  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit
        2.4    8.2   4.7        2.7    8.1   3.3    1.1  1  PF13897.1  Golgi-dynamics membrane-trafficking
        3.7    5.5   8.0        3.6    5.5   5.6    1.0  1  PF08553.5  VID27 cytoplasmic protein
        4.2    6.3   8.4        4.8    6.1   5.8    1.1  1  PF07222.7  Proacrosin binding protein sp32
        5.3    5.9   6.1        5.3    5.9   4.2    1.0  1  PF13203.1  Putative metallopeptidase domain
        6.1    5.2   5.7        6.3    5.2   3.9    1.0  1  PF07267.6  Nucleopolyhedrovirus capsid protein P87
        6.3    4.3  13.2          6    4.3   9.2    1.1  1  PF04931.8  DNA polymerase phi


Domain annotation for each model (and alignments):
>> PF03247.9  Prothymosin/parathymosin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1  13.6   8.2e-05     0.035      48      93 ..      30      72 ..      12      76 .. 0.64

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 8.2e-05
    PF03247.9 48 ddeedeeeekeeedeeeegegeeeeeeeeeeeegatvkraaedeed 93
                  +e +eeee+++++eeee+eg+eee+  +   eg   kr ae e +
  MMETSP1325-20131115|13343_1 30 SKESEEEEESDDDEEEEEEEGDEEEGKKD---EGGGFKRKAESEPE 72
                 34555666666666666666666665554...56667899996544 PP

>> PF03066.10  Nucleoplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   7.6   0.00018     0.076     116     145 ..      28      56 ..      10      67 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 0.00018
                  ..----XXXXXXXXXXXXXXXXXXXXXXXX CS
   PF03066.10 116 deeddeedeeeeddeedddeeeeeeeespv 145
                   ++++ e+eee dd+e+++eee +eee  +
  MMETSP1325-20131115|13343_1  28 VQSKESEEEEESDDDEEEEEEEGDEEE-GK 56 
                  333333333333333333333333332.22 PP

>> PF05432.6  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   9.0   0.00017     0.074     118     155 ..      21      59 ..       9      80 .. 0.66

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00017
    PF05432.6 118 lpkkaGdigkkaak.edesdedeeeeeeeeeeeeaevee 155
                    kk G +++k +  e+esd+deeeeeee +eee   +e
  MMETSP1325-20131115|13343_1  21 AAKKRGWVQSKESEeEEESDDDEEEEEEEGDEEEGKKDE 59 
                  456777777765541566777777776555555544433 PP

>> PF05285.7  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   8.6   0.00031      0.13     113     159 ..      22      68 ..      10      84 .. 0.64

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00031
    PF05285.7 113 DeegewvdvesdeeeessDsedeeeeseeeeeeeesekkkkeesdee 159
                   ++ +wv+ +++eeee+sD+++eeee+e +eee++++++   + ++e
  MMETSP1325-20131115|13343_1  22 AKKRGWVQSKESEEEEESDDDEEEEEEEGDEEEGKKDEGGGFKRKAE 68 
                  45789**9999988878887777775665555444444433322222 PP

>> PF06213.7  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   8.1   0.00038      0.16     218     263 ..      30      68 ..      11      82 .. 0.48

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 0.00038
    PF06213.7 218 ssdseekrdedddkedeeddaseeeesgdsdslskdedasseetes 263
                  s++s       +++e+++dd+ eeee+gd+++ +kde    + + +
  MMETSP1325-20131115|13343_1  30 SKES-------EEEEESDDDEEEEEEEGDEEEGKKDEGGGFKRKAE 68 
                  2333.......33444444444444444444433333222222222 PP

>> PF08589.5  Fungal protein of unknown function (DUF1770)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.8   0.00046       0.2      11      53 ..       6      51 ..       2      73 .. 0.61

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00046
    PF08589.5 11 srepsplrdvnestaasess...ssslsddqskeeddsvnsdveea 53
                  ++ps + +v++  aa +++    s+ s+++++++dd+ ++++e +
  MMETSP1325-20131115|13343_1  6 PVDPSCTMEVENVLAAAKKRgwvQSKESEEEEESDDDEEEEEEEGD 51
                 568999999*999999999965333333333333344333222222 PP

>> PF04546.8  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   6.1   0.00051      0.22      44      71 ..      29      55 ..       2      75 .. 0.45

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00051
    PF04546.8 44 eseddeeeeeddddddededeeeeseea 71
                 +s+++eeeee+ ddd+e+e+ee ++ee+
  MMETSP1325-20131115|13343_1 29 QSKESEEEEES-DDDEEEEEEEGDEEEG 55
                 22333333333.2222222222211111 PP

>> PF03286.9  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.5    0.0007       0.3      75     116 ..      28      67 ..       9      81 .. 0.56

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0007
    PF03286.9  75 ekeeeeekkeeededkdteenendddekeeskdskesasane 116
                   +++e+e++ee+d+d+  ee+e++ de+e++kd  ++   ++
  MMETSP1325-20131115|13343_1  28 VQSKESEEEEESDDDE--EEEEEEGDEEEGKKDEGGGFKRKA 67 
                  2333333444444444..444444566666666655555444 PP

>> PF10446.4  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   7.2   0.00084      0.36      39      74 ..      23      58 ..       8      79 .. 0.51

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.00084
    PF10446.4 39 rklgeeaeeealeeedededdeeddddeDedddddd 74
                 +k g  + +e +eee+ d+d+ee++++ De++ ++d
  MMETSP1325-20131115|13343_1 23 KKRGWVQSKESEEEEESDDDEEEEEEEGDEEEGKKD 58
                 444444444444444333333333333333332222 PP

>> PF01056.13  Myc amino-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.1   0.00081      0.35     218     243 ..      29      54 ..       4      83 .. 0.59

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00081
   PF01056.13 218 sssssgedseseeeeeeeeeeeeeee 243
                   s  s+e+ es+++eeeeeee +eee
  MMETSP1325-20131115|13343_1  29 QSKESEEEEESDDDEEEEEEEGDEEE 54 
                  22333333333344444444444444 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.3    0.0013      0.55      78     116 ..      21      59 ..       8      83 .. 0.56

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.0013
    PF08432.5  78 yeekqkakkekkkkkkekdkekekkkdkkddksekekek 116
                   ++k+ ++++k+++++e+++++e+++++++d++e +k +
  MMETSP1325-20131115|13343_1  21 AAKKRGWVQSKESEEEEESDDDEEEEEEEGDEEEGKKDE 59 
                  345666777766666555554555555555444433333 PP

>> PF04147.7  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   8.5    0.0012      0.52     341     387 ..      29      70 ..       8      84 .. 0.54

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0012
    PF04147.7 341 eeegvededeeeddddeeeeeedvdedeeeedeedeesddeeeeeee 387
                  +  ++e+e+eee+dddeeeeee+ de   ee ++de   ++ ++e+e
  MMETSP1325-20131115|13343_1  29 Q--SKESEEEEESDDDEEEEEEEGDE---EEGKKDEGGGFKRKAESE 70 
                  3..45556666666666644444444...333333333333333333 PP

>> PF04177.7  TAP42-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.2    0.0015      0.63     279     328 ..      11      56 ..       6      64 .. 0.81

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 0.0015
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF04177.7 279 PtMtvdEyleeevkegkiikggeekaeaksaeekekdeddeeedDeetek 328
                   tM v+  l    k+g ++ ++ e+    ++e+++++e++eee Dee+ k
  MMETSP1325-20131115|13343_1  11 CTMEVENVLAAAKKRGWVQSKESEE----EEESDDDEEEEEEEGDEEEGK 56 
                  599999****999999999999888....777777778888888888766 PP

>> PF06524.7  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   4.8    0.0014       0.6     265     293 ..      31      59 ..      10      77 .. 0.51

  Alignments for each domain:
  == domain 1    score: 9.1 bits;  conditional E-value: 0.0014
    PF06524.7 265 ksvnygyesdddeeesaedydeeededdd 293
                  k ++  +esdddeee++e+ deee ++d+
  MMETSP1325-20131115|13343_1  31 KESEEEEESDDDEEEEEEEGDEEEGKKDE 59 
                  22233333444444444444433333332 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   5.9    0.0017      0.73      75     114 ..      30      60 ..       9      80 .. 0.40

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0017
    PF07423.6  75 dedkeddsesekkdeeseeeeeeekekkeeeseedekete 114
                  ++++e+++es++++ee+eee +ee+ kk+e          
  MMETSP1325-20131115|13343_1  30 SKESEEEEESDDDEEEEEEEGDEEEGKKDE---------G 60 
                  122222112222222222222222222222.........2 PP

>> PF11081.3  Protein of unknown function (DUF2890)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   6.4    0.0016      0.66      36      78 ..      31      73 ..       6      85 .] 0.68

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0016
    PF11081.3 36 eeledwedSldeedeeaeeveeetaakskapssssksssqetk 78
                 +e e++e+S d+e+ee+ee +ee+ +k++    + k++s+ + 
  MMETSP1325-20131115|13343_1 31 KESEEEEESDDDEEEEEEEGDEEEGKKDEGGGFKRKAESEPEG 73
                 3334445788999999999999999997777777777666554 PP

>> PF05887.6  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   8.3     0.002      0.85      52     103 ..      21      72 ..      11      79 .. 0.74

  Alignments for each domain:
  == domain 1    score: 9.3 bits;  conditional E-value: 0.002
    PF05887.6  52 addtngtdrddepeeeeetepeeegeeetepeeegeeetepeeeeepepepe 103
                  a    g  + +e eeeee++ +ee eee + eeeg+++ +   + + e epe
  MMETSP1325-20131115|13343_1  21 AAKKRGWVQSKESEEEEESDDDEEEEEEEGDEEEGKKDEGGGFKRKAESEPE 72 
                  5556666777888999999998888888888888888777776666666665 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.7    0.0016      0.69     127     156 ..      30      60 ..       8      85 .] 0.40

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0016
    PF02724.9 127 mkeeee.eesdedsdseddeeeeessasekr 156
                  +ke+ee eesd+d+++e++e +ee+ ++++ 
  MMETSP1325-20131115|13343_1  30 SKESEEeEESDDDEEEEEEEGDEEEGKKDEG 60 
                  1111111222222222222222222222222 PP

>> PF08595.6  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   4.7    0.0023         1      41      77 ..      18      54 ..      12      61 .. 0.38

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.0023
    PF08595.6 41 vlsrkrkkkkkepridedenelddededdeeeedede 77
                 vl   +k+   + +  e+e+e+dd++e++eee de+e
  MMETSP1325-20131115|13343_1 18 VLAAAKKRGWVQSKESEEEEESDDDEEEEEEEGDEEE 54
                 5552222222222223333333333333333333333 PP

>> PF01698.11  Floricaula / Leafy protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   3.3    0.0023      0.98     192     245 ..      28      84 ..       6      85 .] 0.41

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.0023
   PF01698.11 192 kqkrkkkkelkseededeeeeededeegsgedge..erqre.hPfivtepgevargk 245
                   q +++++e++s++de+eeeee ++eeg++++g   +r+ e  P     +  var+k
  MMETSP1325-20131115|13343_1  28 VQSKESEEEEESDDDEEEEEEEGDEEEGKKDEGGgfKRKAEsEPEGAGSACSVARAK 84 
                  122222222233333333333333333332222223666552466666666666665 PP

>> PF05642.6  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.0    0.0027       1.2     106     145 ..      29      68 ..       7      84 .. 0.64

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.0027
    PF05642.6 106 neddkGskedseedddeeeeednkstsskdgkgskkaqpg 145
                  +++++ ++e+s++d++eeeee ++    kd+ g  k +  
  MMETSP1325-20131115|13343_1  29 QSKESEEEEESDDDEEEEEEEGDEEEGKKDEGGGFKRKAE 68 
                  5555666667777777777777888888887665544333 PP

>> PF03344.10  Daxx Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   8.6     0.003       1.3     448     493 ..      31      74 ..       8      83 .. 0.52

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.003
   PF03344.10 448 eedeeddekeeedkseeeeeeeeeeeeeeeadneeeedleassege 493
                  +e   ++e+e++d++eeeeee +eee ++++  + ++ +e+ +eg 
  MMETSP1325-20131115|13343_1  31 KES--EEEEESDDDEEEEEEEGDEEEGKKDEGGGFKRKAESEPEGA 74 
                  122..22222233334444444455555555555555555555544 PP

>> PF03985.8  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   7.7    0.0038       1.6     375     410 ..      30      65 ..      12      84 .. 0.48

  Alignments for each domain:
  == domain 1    score: 7.2 bits;  conditional E-value: 0.0038
    PF03985.8 375 edeeeeeeqrseeeeeeeeedeeeeeseeeeelesk 410
                   +e eeee+++++eeeeeee++eee++++e    ++
  MMETSP1325-20131115|13343_1  30 SKESEEEEESDDDEEEEEEEGDEEEGKKDEGGGFKR 65 
                  333333333333333333333333333333322222 PP

>> PF06088.6  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   2.8    0.0047         2     121     153 ..      29      60 ..      11      73 .. 0.50

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0047
    PF06088.6 121 pveksssededdeddededeaakiesnsdsees 153
                   +++s++e+e+d+d+e+e+e+ + e++ +++e 
  MMETSP1325-20131115|13343_1  29 QSKESEEEEESDDDEEEEEEEGDEEEG-KKDEG 60 
                  334444555555555333333333333.33333 PP

>> PF09026.5  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  10.2    0.0062       2.6      15      39 ..      32      56 ..      24      71 .. 0.55

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0062
    PF09026.5 15 dseeeeedeeedeededeedeeedd 39
                 +seeeee ++++ee+e+e deee+ 
  MMETSP1325-20131115|13343_1 32 ESEEEEESDDDEEEEEEEGDEEEGK 56
                 3333333333333344444444443 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.6    0.0055       2.3      29      61 ..      27      60 ..      10      82 .. 0.45

  Alignments for each domain:
  == domain 1    score: 6.9 bits;  conditional E-value: 0.0055
   PF03896.11 29 aasaqdltedeeaeddvvdedee.deaeveedek 61
                  ++ ++  e+ee++dd+++e+ee de e + de 
  MMETSP1325-20131115|13343_1 27 WVQSKESEEEEESDDDEEEEEEEgDEEEGKKDEG 60
                 2333344444444444443333312222233332 PP

>> PF13897.1  Golgi-dynamics membrane-trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   3.3    0.0064       2.7      48      80 ..      27      59 ..      13      71 .. 0.76

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0064
    PF13897.1 48 svkvsessdeeeeeeeeeeevesedvekgkkek 80
                  v+  es++eee++++eeee+e++d e+gkk++
  MMETSP1325-20131115|13343_1 27 WVQSKESEEEEESDDDEEEEEEEGDEEEGKKDE 59
                 567778888888888888888888888888654 PP

>> PF08553.5  VID27 cytoplasmic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   5.6    0.0084       3.6     379     405 ..      31      57 ..      10      81 .. 0.44

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.0084
    PF08553.5 379 leiedeeeeeeaeeeeeeeeeeeedee 405
                   e+e+eee+ ++eeeeeee +eee ++
  MMETSP1325-20131115|13343_1  31 KESEEEEESDDDEEEEEEEGDEEEGKK 57 
                  222222222222222222222222222 PP

>> PF07222.7  Proacrosin binding protein sp32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.8     0.011       4.8     209     240 ..      27      62 ..      10      65 .. 0.53

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.011
    PF07222.7 209 qleehkteekkkqeeqeeee....keeeakqeegeG 240
                   ++  + ee+++ ++ eeee    +eee+k++eg G
  MMETSP1325-20131115|13343_1  27 WVQSKESEEEEESDDDEEEEeeegDEEEGKKDEGGG 62 
                  444444444433333322221124677777777766 PP

>> PF13203.1  Putative metallopeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.2     0.013       5.3     157     205 ..      30      77 ..       9      85 .] 0.51

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.013
    PF13203.1 157 gdgsgesegqgeqdskknrkdapekakvralakgesadlaespegksap 205
                  +++s e+e+++++d++++++++ e+  +   + g++++++ +peg++++
  MMETSP1325-20131115|13343_1  30 SKES-EEEEESDDDEEEEEEEGDEEEGKKDEGGGFKRKAESEPEGAGSA 77 
                  2222.22222222333333333334455555677777777777776654 PP

>> PF07267.6  Nucleopolyhedrovirus capsid protein P87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   3.9     0.015       6.3     403     442 ..      20      58 ..       5      70 .. 0.48

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.015
    PF07267.6 403 tekrkRrrvrklqelssdeeedssdeeevDkekerkRrre 442
                  ++ +kR  v++ +  +++e + +++eee+++  e   +++
  MMETSP1325-20131115|13343_1  20 AAAKKRGWVQSKESEEEEESD-DDEEEEEEEGDEEEGKKD 58 
                  455666666664222222222.222222222223333344 PP

>> PF04931.8  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   9.2     0.014         6     669     692 ..      31      54 ..       6      70 .. 0.61

  Alignments for each domain:
  == domain 1    score: 4.3 bits;  conditional E-value: 0.014
    PF04931.8 669 edseseseddsEdgeedEkeddde 692
                  ++se+e+e+d+ ++ee+E+ d+ e
  MMETSP1325-20131115|13343_1  31 KESEEEEESDDDEEEEEEEGDEEE 54 
                  344444444322222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       910  (0.0665594); expected 273.4 (0.02)
Passed bias filter:                      646  (0.0472499); expected 273.4 (0.02)
Passed Vit filter:                       140  (0.0102399); expected 13.7 (0.001)
Passed Fwd filter:                        36  (0.00263312); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.47u 0.46s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 384.32
//
Query:       MMETSP1325-20131115|13349_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.53
# Mc/sec: 293.89
//
Query:       MMETSP1325-20131115|13350_1  [L=239]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       389  (0.0284523); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.40s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1123.00
//
Query:       MMETSP1325-20131115|13363_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.087   11.1   0.1       0.12   10.6   0.1    1.0  1  PF00275.15 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)


Domain annotation for each model (and alignments):
>> PF00275.15  EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   8.7e-06      0.12     234     305 ..      36     109 ..      35     111 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 8.7e-06
                  ---TTTHHHHHHHHHCT---EEEES--GGGSH..HH..HHHHHHHH..-EEEEETTCEEEEE--.S--BEEEEE CS
   PF00275.15 234 egDassAayflaaAaitggevlvenvginslq..Gdiealdevlekmgaeitqeedssivvgeeklklkdvdie 305
                  +gDa s+   la+A++t   +++  v ++  +   + + ++e  +++ga+it++++  i v++ + ++++v+ie
  MMETSP1325-20131115|13363_1  36 PGDAGSTDVLLAFAIVTFVAITLAPVLFHVAKvqPVNAKANEEARRLGAKITRNQKTKIDVQPAESEMVPVKIE 109
                  699***************9999999987654422777788889999*****************99999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       475  (0.0347425); expected 273.4 (0.02)
Passed bias filter:                      415  (0.030354); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.41s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 536.78
//
Query:       MMETSP1325-20131115|13365_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00016   22.0   3.9    0.00019   21.8   2.7    1.1  1  PF04749.12 PLAC8 family
  ------ inclusion threshold ------
        8.2    5.8   9.2         22    4.5   6.4    1.8  1  PF12225.3  Methylene-tetrahydrofolate reductase C terminal


Domain annotation for each model (and alignments):
>> PF04749.12  PLAC8 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   2.7   2.8e-08   0.00019      84     103 ..      10      29 ..       3      32 .. 0.91

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 2.8e-08
   PF04749.12  84 acdDclvhlfcppcalcQes 103
                   c+Dcl h+fcp+ca+ Qe+
  MMETSP1325-20131115|13365_1  10 ECGDCLLHFFCPCCAILQEK 29 
                  69****************96 PP

>> PF12225.3  Methylene-tetrahydrofolate reductase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   6.4    0.0032        22      19      41 ..       4      26 ..       1      52 [. 0.82

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.0032
    PF12225.3 19 llekcksCgeCvLeetggiCpvt 41
                 + + c +Cg+C L+ +   C + 
  MMETSP1325-20131115|13365_1  4 MSQPCGECGDCLLHFFCPCCAIL 26
                 5678**********999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       409  (0.0299152); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 270.23
//
Query:       MMETSP1325-20131115|13367_1  [L=116]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00025   20.3   0.0    0.00045   19.5   0.0    1.4  1  PF02770.14 Acyl-CoA dehydrogenase, middle domain


Domain annotation for each model (and alignments):
>> PF02770.14  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.3e-08   0.00045      17      51 ..       2      43 ..       1      45 [. 0.96

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 3.3e-08
   PF02770.14 17 sTtArrdgdg..yvln.....GtKwfisnggiadlalvlart 51
                 +T A+ d+ +  y+++     ++K++is g +ad a+v+a++
  MMETSP1325-20131115|13367_1  2 QTEATWDDKNqqYIIHtpspgAAKNWISQGFTADKAVVVANL 43
                 89**************************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 579.12
//
Query:       MMETSP1325-20131115|13369_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 276.50
//
Query:       MMETSP1325-20131115|13353_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-15   55.2   1.3    3.3e-15   54.9   0.2    1.6  2  PF00240.18 Ubiquitin family
    3.5e-14   53.0   0.0    5.1e-14   52.4   0.0    1.2  1  PF00838.12 Translationally controlled tumour protein
    2.7e-07   30.0   0.0    6.8e-07   28.7   0.0    1.7  1  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
      0.047   13.3   0.0       0.27   10.9   0.0    2.1  2  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.2   9.8e-19   3.3e-15      35      69 .]       2      36 ..       1      36 [. 0.97
   2 ?   -2.6   0.0      0.87     3e+03      45      56 ..     147     158 ..     145     160 .. 0.74

  Alignments for each domain:
  == domain 1    score: 54.9 bits;  conditional E-value: 9.8e-19
                 GEEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
   PF00240.18 35 qqrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69
                 qqrLi++Gk+LeD+rtls+yniq++stlhlvlrlr
  MMETSP1325-20131115|13353_1  2 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 36
                 9********************************87 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.87
                  ETTTSBTTTTTT CS
   PF00240.18  45 LeDdrtlseyni 56 
                  L+Dd ++++ ++
  MMETSP1325-20131115|13353_1 147 LKDDESIEQAQV 158
                  889998888766 PP

>> PF00838.12  Translationally controlled tumour protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   0.0   1.5e-17   5.1e-14      50     164 ..      97     216 ..      79     217 .. 0.85

  Alignments for each domain:
  == domain 1    score: 52.4 bits;  conditional E-value: 1.5e-17
                  ---------GGG-----HHHHTTT-EEEHH.HHHHHHHHHHHHHHHHHHHHHHH-...--HHHHHHHHH---HHHHT-HHTT-EEEE--TTT-----EEEEEE---.EEEEEEEETTTEE CS
   PF00838.12  50 saeggeegveeavekvvdivlnfrLqetaf.dkksfkayikkylkavkekleeek...keevelFkkkieeavkkllakfkdlqffiGesmaedgmvalleyredg.etPylilfkeglk 164
                   a++g+++  ++ve+ +  v +f  +e+ f +k + k++ik+y+ av ++l++++   +++v++F+ +++++ + ll+k+kdl   +G + + dg + + ++ +++ + P ++++k glk
  MMETSP1325-20131115|13353_1  97 EADDGQDDEAQEVENSIAGVSAFNYTEMPFsSKAEMKEWIKTYVNAVRQNLKDDEsieQAQVKAFMGEAKQFAVWLLKKYKDLTPQMGSNCNADGALCFEYWPDEAqAHPSFVYIKGGLK 216
                  4667777777888999999*********661677899**************8775222556*****************************************9665268********996 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0     2e-10   6.8e-07      41      72 .]       2      33 ..       1      33 [. 0.96

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 2e-10
                 T-EEE----B--TTSBGGGSS--TTEEEEEE- CS
    PF11976.3 41 qvrLiFDGerLdpndtvedldiedgdtidvvi 72
                 q+rLiF G++L++ +t+ d++i++++t+++v+
  MMETSP1325-20131115|13353_1  2 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 33
                 89***************************996 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   7.9e-05      0.27      52      87 ..       4      33 ..       1      36 [. 0.80
   2 ?   -1.0   0.0       0.4   1.4e+03      34      46 ..     195     207 ..     192     210 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 7.9e-05
                 EEE----B--TTSBGGGGS--TTS-----EEEEEEE CS
    PF13881.1 52 klilaGkiLednktLkelrlplgevkggvtvmHvvv 87
                 +li aGk Led +tL++++++ +       ++H+v+
  MMETSP1325-20131115|13353_1  4 RLIFAGKQLEDGRTLSDYNIQKES------TLHLVL 33
                 9*****************766554......477766 PP

  == domain 2    score: -1.0 bits;  conditional E-value: 0.4
                  HHHS-TT------ CS
    PF13881.1  34 laeWpkekeskpk 46 
                  ++ Wp+e++ +p+
  MMETSP1325-20131115|13353_1 195 FEYWPDEAQAHPS 207
                  678*****99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       449  (0.0328408); expected 273.4 (0.02)
Passed bias filter:                      398  (0.0291106); expected 273.4 (0.02)
Passed Vit filter:                        48  (0.00351083); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.41s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 1013.84
//
Query:       MMETSP1325-20131115|13373_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-13   49.8   0.1    2.8e-13   49.7   0.1    1.0  1  PF02230.11 Phospholipase/Carboxylesterase
    3.4e-07   29.9   0.3    4.9e-07   29.5   0.2    1.2  1  PF12695.2  Alpha/beta hydrolase family
    2.7e-05   24.0   1.4     0.0018   18.0   0.2    1.9  2  PF12697.2  Alpha/beta hydrolase family
     0.0018   17.6   0.3     0.0032   16.8   0.2    1.4  1  PF03959.8  Serine hydrolase (FSH1)
  ------ inclusion threshold ------
      0.016   14.8   0.3      0.046   13.3   0.1    1.6  2  PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
      0.016   14.6   0.4       0.02   14.3   0.3    1.1  1  PF00561.15 alpha/beta hydrolase fold
      0.093   12.3   0.0      0.098   12.2   0.0    1.2  1  PF01083.17 Cutinase


Domain annotation for each model (and alignments):
>> PF02230.11  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.1   1.4e-16   2.8e-13     107     200 ..      22     114 ..       4     129 .. 0.91

  Alignments for each domain:
  == domain 1    score: 49.7 bits;  conditional E-value: 1.4e-16
   PF02230.11 107 iiigGFSqGaalalylaltspkplggivafsgalplnqkleqsatkvakipilqlHgeeDevvplalgkaakellktllnkvelksyeglgHsi 200
                    ++GFSqGa+ ++ lal + + ++g++ +sga ++ ++++  ++k + + +l +Hg  D+v+p+a +  +k+ll + +  v+l++   +gH+ 
  MMETSP1325-20131115|13373_1  22 LGLAGFSQGAMTVMDLALHLDEAVAGVTMISGAPIVVEQWAVRLKKHKGLRVLVTHGMSDQVLPFAASGWTKQLLESGGAAVSLQTHS-GGHEL 114
                  5689********************************************************************************9988.99986 PP

>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.2   2.5e-10   4.9e-07      57     128 ..      19      97 ..       4     113 .. 0.76

  Alignments for each domain:
  == domain 1    score: 29.5 bits;  conditional E-value: 2.5e-10
    PF12695.2  57 leriilvGhSlGGgvalelagrd.drvkglvllapfpd.gedla.....kltlpvllihGtrDgvvppeeaeklakalp 128
                  + +++l+G+S+G+++++ la    + v+g+ ++++ p   e++a     +++l vl+ hG +D+v+p++++  + + l 
  MMETSP1325-20131115|13373_1  19 MAKLGLAGFSQGAMTVMDLALHLdEAVAGVTMISGAPIvVEQWAvrlkkHKGLRVLVTHGMSDQVLPFAASGWTKQLLE 97 
                  5789*****************77799999999999543333333323346777**************999877666655 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.2   9.3e-07    0.0018      65     102 ..      16      56 ..       1      69 [. 0.78
   2 !    5.6   0.0     0.006        12     176     215 ..      70     112 ..      58     121 .. 0.75

  Alignments for each domain:
  == domain 1    score: 18.0 bits;  conditional E-value: 9.3e-07
                  ....--EEEE--------HHHHHH----.EEEEEEE----- CS
    PF12697.2  65 l...rpvvlvGHSlGgavalaaaarrpdlvrglvlidppgp 102
                      +++ l G S+G+++++ +a +  + v+g+ +i+ ++ 
  MMETSP1325-20131115|13373_1  16 DlpmAKLGLAGFSQGAMTVMDLALHLDEAVAGVTMISGAPI 56 
                  15557889*****************************9994 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.006
                  -S-EEEEE-----HHH...HHHHHHHHHHST.TEEEEE---SSS CS
    PF12697.2 176 dvPvlviageaDrvvp...peearrlaealp.garvvvlpgagH 215
                  ++ vlv +g  D+v+p     + ++l e ++  +++++++ +gH
  MMETSP1325-20131115|13373_1  70 GLRVLVTHGMSDQVLPfaaSGWTKQLLESGGaAVSLQTHS-GGH 112
                  678*************876555566665544267999998.778 PP

>> PF03959.8  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.2   1.6e-06    0.0032     105     202 ..      23     114 ..      16     122 .. 0.79

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 1.6e-06
    PF03959.8 105 GiiGFSqGaalaallaslleellkeakhpklkfailvsGfkleepkyeeyyeedkiqtpsLhvlGelDtvvdee...rseaLaeafknsskvlkHpggHfv 202
                  G+ GFSqGa+ ++ la  l+e            + ++sG+ +  ++ +   +++k  +++L  +G +D+v + +    +++L+e+      + +H+ggH +
  MMETSP1325-20131115|13373_1  23 GLAGFSQGAMTVMDLALHLDEAV--------AGVTMISGAPIVVEQWAVRLKKHK-GLRVLVTHGMSDQVLPFAasgWTKQLLESGGAAVSLQTHSGGHEL 114
                  999******99988887777755........468899999997765555555555.8**************9873334578888888879*********86 PP

>> PF08840.6  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   2.4e-05     0.046      23      68 ..      21      67 ..      16      89 .. 0.83
   2 ?   -0.1   0.0      0.28   5.5e+02     117     161 ..      72     112 ..      62     118 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 2.4e-05
                 ----B------HHHHHHHHHSS.S---EEEE----------EEETTE CS
    PF08840.6 23 kigllGiSkGgelalllasflk.kisavvlingsavvvegkllykee 68
                 k gl G S+G+ +++ la +l+ ++  v +i+g+ +vve+ +++ ++
  MMETSP1325-20131115|13373_1 21 KLGLAGFSQGAMTVMDLALHLDeAVAGVTMISGAPIVVEQWAVRLKK 67
                 89********************899999999*999999877665544 PP

  == domain 2    score: -0.1 bits;  conditional E-value: 0.28
                  -EEEEE----SSS-HHHHHHHHHHHHHH----.--EEEE------ CS
    PF08840.6 117 pillvvgedDknwpSkesaekaserLkkagkkvevqlltYpkaGH 161
                   +l++ g+ D+++p + s    ++ L+  g  v++q +   ++GH
  MMETSP1325-20131115|13373_1  72 RVLVTHGMSDQVLPFAASG-WTKQLLESGGAAVSLQTH---SGGH 112
                  5788899999999988877.666777777777777777...8888 PP

>> PF00561.15  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.3     1e-05      0.02      33     101 ..       9      98 ..       2     111 .. 0.82

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1e-05
                  HHHHHHHHSTSSSEEEEE-B---HHHHHHHHHCGGGEEEEEEESB--..................HHSHCSHSTTCHC...HHHHHHHHC CS
   PF00561.15  33 dleavldalglkkltlvGhSmGGmialayaaeypdrvkamvllgtva..................vlsdglssdvlnr...gstltllad 101
                   +++ +  l+  kl l G+S+G+m++  +a+   + v++++ ++ ++                   ++ g+s+ vl+    g+t++ll++
  MMETSP1325-20131115|13373_1   9 EVRTMFGDLPMAKLGLAGFSQGAMTVMDLALHLDEAVAGVTMISGAPivveqwavrlkkhkglrvLVTHGMSDQVLPFaasGWTKQLLES 98 
                  566777778888999**************************9999767888888888888888888888888888777777777777766 PP

>> PF01083.17  Cutinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     5e-05     0.098      71     115 ..      10      48 ..       1      96 [. 0.78

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5e-05
                  HHHHHHH-TTSEEEE---B---.HHHHHHHHH--S-HHHCTTEEEE CS
   PF01083.17  71 vnsaaskCPntkivlgGYSqGa.avmdnaiagkglsaavadkvkav 115
                  v  +    P +k+ l G+SqGa +vmd a++         ++v++v
  MMETSP1325-20131115|13373_1  10 VRTMFGDLPMAKLGLAGFSQGAmTVMDLALHL-------DEAVAGV 48 
                  55666677999**********95688888877.......3444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 663.99
//
Query:       MMETSP1325-20131115|13355_1  [L=270]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-81  273.0   0.0    1.9e-81  272.8   0.0    1.0  1  PF02167.10 Cytochrome C1 family
    0.00026   20.9   0.0    0.00056   19.9   0.0    1.6  1  PF13442.1  Cytochrome C oxidase, cbb3-type, subunit III


Domain annotation for each model (and alignments):
>> PF02167.10  Cytochrome C1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  272.8   0.0   2.7e-85   1.9e-81       1     217 [.      42     259 ..      42     261 .. 0.99

  Alignments for each domain:
  == domain 1    score: 272.8 bits;  conditional E-value: 2.7e-85
                  -S---------HHHHH---HHHHHTTTTT---TT-BGGGSS------HHHHHHHH-------....S---------TTSB---..........----------TTTGGG-----HHHHHHH-------TT----..----SS------S---S-SS-SS---------HHHHHHHHHHHHHHHH-TTHHHHHH---HHHHH---HHHHHHHHHHHHCS CS
   PF02167.10   1 lsfagifgsfDkaslqrGaqvykevCsaCHslkyvryrrlaeglglteeevkalaaeyevkd.pddtgemeeRpgkvadklpsplaneeaakaanggaapPDLsliakaRaggadYiyslLtgyeedpeavevreggyyNkyfpggviaMpkpLsdgqveyedgteatvdqmakDvvaFLawaaePkleeRkklglkvllflliltvllyllkkeiWk 217
                  +s++g++  fD ++++rG+qvykevCs+CHs+++v+yr+l e   ++e+evka+a+ ++v d pd +gem+eRpgk++d lpsp++n+ea +aangga+pPDLsl++kaR+ g dYi++lLtgy ++pe++ev eg +yN+yf+g +iaMp+pL+dg vey dgt+at++qmakDv+ FLawaaeP+++eRk++g+k ++ l+  +v++ ++k+  W 
  MMETSP1325-20131115|13355_1  42 WSHHGPLAAFDAKAVRRGFQVYKEVCSSCHSVSRVNYRNLVEYGAWSEKEVKAMAEDVDVIDgPDASGEMFERPGKLSDPLPSPYPNDEAGRAANGGALPPDLSLMVKARHAGVDYIFNLLTGYVDPPEGKEVLEGLHYNPYFSGAAIAMPPPLMDGAVEYPDGTPATASQMAKDVAVFLAWAAEPEHDERKQAGMKWIFALGCAAVVTGFYKRFRWG 259
                  99****************************************8899************************************************************************************************************************************************************************9995 PP

>> PF13442.1  Cytochrome C oxidase, cbb3-type, subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   8.2e-08   0.00056       2      43 ..      55      98 ..      54     120 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.9 bits;  conditional E-value: 8.2e-08
                 HCH---HHHHHCTTTTH---TT-.--TTSH.HHHHHHHHCHHH- CS
    PF13442.1  2 aaaaGaalynanCaaCHgsggag.pslagd.awepdalkkiikn 43
                 a+++G ++y++ C++CH+   ++  +l    aw+++++k+++++
  MMETSP1325-20131115|13355_1 55 AVRRGFQVYKEVCSSCHSVSRVNyRNLVEYgAWSEKEVKAMAED 98
                 6899**************77676688887779999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1244.26
//
Query:       MMETSP1325-20131115|13374_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 331.13
//
Query:       MMETSP1325-20131115|13381_1  [L=40]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (40 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 184.34
//
Query:       MMETSP1325-20131115|13383_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       112  (0.00819193); expected 273.4 (0.02)
Passed bias filter:                      100  (0.00731422); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.53
# Mc/sec: 293.89
//
Query:       MMETSP1325-20131115|13384_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.51
# Mc/sec: 192.65
//
Query:       MMETSP1325-20131115|13385_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.52
# Mc/sec: 294.94
//
Query:       MMETSP1325-20131115|13390_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-15   56.2   0.0    4.1e-15   55.6   0.0    1.3  1  PF05046.9  Mitochondrial large subunit ribosomal protein (Img2)
  ------ inclusion threshold ------
      0.062   12.9   0.0      0.091   12.4   0.0    1.3  1  PF01253.17 Translation initiation factor SUI1


Domain annotation for each model (and alignments):
>> PF05046.9  Mitochondrial large subunit ribosomal protein (Img2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.0     6e-19   4.1e-15       2      87 .]      73     152 .]      72     152 .] 0.92

  Alignments for each domain:
  == domain 1    score: 55.6 bits;  conditional E-value: 6e-19
    PF05046.9   2 lsYfvrRkkssn.lPVYldvknggtkilTeirkiqGdvsalekdLrsfleeelkkskevnvkelsgkikikGnrveevkkfLeskgf 87 
                  l++ v+R+++++ lPVY+d+kn  ++++T +r+i+Gd+++++++++ +++          v++  g++++ G++++ v+++L   gf
  MMETSP1325-20131115|13390_1  73 LPFRVQRTATGQfLPVYTDIKNARSRVVTIVRNIDGDIEEMQREMSVVCG-------GADVNQRAGRLEVVGRHKRGVTEWLVGLGF 152
                  6899***8877637***********************************5.......4689*********************88777 PP

>> PF01253.17  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.3e-05     0.091      10      77 ..      89     150 ..      78     152 .] 0.77

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 1.3e-05
   PF01253.17  10 rle.krrgrKtvTvvegleleeidlkkllkalkkkfacggtvvkdknkgevielQGdqrdkvkefLeek 77 
                  +++ k  + + vT+v++++    d++++ +++   ++ g+ v ++   g  +e+ G +++ v e+L   
  MMETSP1325-20131115|13390_1  89 YTDiKNARSRVVTIVRNID---GDIEEMQREMSVVCG-GADV-NQRA-GR-LEVVGRHKRGVTEWLVGL 150
                  5555667789*********...999999999988433.4455.3333.77.*************99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.41s 00:00:00.78 Elapsed: 00:00:00.57
# Mc/sec: 628.01
//
Query:       MMETSP1325-20131115|13392_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.66
# Mc/sec: 243.27
//
Query:       MMETSP1325-20131115|13397_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.8   5.7      0.014   15.6   3.9    1.4  1  PF00428.14 60s Acidic ribosomal protein
       0.73    7.9   7.7       0.61    8.1   5.3    1.1  1  PF06375.6  Bovine leukaemia virus receptor (BLVR)
        4.8    6.9  15.0          6    6.6  10.4    1.4  1  PF07771.6  Tick salivary peptide group 1


Domain annotation for each model (and alignments):
>> PF00428.14  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   3.9   3.1e-06     0.014      49      80 ..      37      68 ..       3      73 .. 0.53

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 3.1e-06
   PF00428.14 49 aaaaaaaaaaaaaaaaaaeeekkeeeeeEeed 80
                  a+++   ++aa++ a+++e+k+++e++E  +
  MMETSP1325-20131115|13397_1 37 GAPVPMDTSGAAEEPAPKKEKKEKKEKKEKKE 68
                 33333333333333333333333333333332 PP

>> PF06375.6  Bovine leukaemia virus receptor (BLVR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.3   0.00013      0.61     193     219 ..      46      72 ..       7      74 .] 0.75

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00013
    PF06375.6 193 plvekkskkkkkkekkekekerdkdkk 219
                   ++e+ + kk+kkekkek+ +++k+kk
  MMETSP1325-20131115|13397_1  46 GAAEEPAPKKEKKEKKEKKEKKEKKKK 72 
                  456666778888888888888888665 PP

>> PF07771.6  Tick salivary peptide group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  10.4    0.0013         6      83     117 ..      38      72 ..       3      74 .] 0.79

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0013
    PF07771.6  83 sgePsdpddyteePtekpkkkkkkskktkkpkkes 117
                  + +P d++  +eeP+ k  kk+kk kk+kk+kk++
  MMETSP1325-20131115|13397_1  38 APVPMDTSGAAEEPAPKKEKKEKKEKKEKKEKKKK 72 
                  44688888899999877777777777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1168  (0.0854301); expected 273.4 (0.02)
Passed bias filter:                      567  (0.0414716); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.70
# Mc/sec: 253.33
//
Query:       MMETSP1325-20131115|13398_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-07   30.6   0.7    2.3e-07   30.4   0.5    1.0  1  PF01323.15 DSBA-like thioredoxin domain


Domain annotation for each model (and alignments):
>> PF01323.15  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.5   1.7e-11   2.3e-07      63     148 ..      19     104 ..      10     105 .] 0.91

  Alignments for each domain:
  == domain 1    score: 30.4 bits;  conditional E-value: 1.7e-11
                  HHHHHHHHHHT......TTCCT.HHHHHHHHHHHHHHHHGHHHHHHHHHHHHHTST---SSHHHHHHHHHH----HHHHHHHCTSHH CS
   PF01323.15  63 edlkrlaeaegiplrfpkdklk.nstraarlllaagaeglaekvvrelfealwsegqaitddqellevaekaGldaeeldealesea 148
                  +++  l+ + g++l+ + +  + +  r +rl+++ag+ g++e++   l  + ++++q  + +++ll++a ++Gld+e+++++le+++
  MMETSP1325-20131115|13398_1  19 AQMHALGLRAGVKLNYDVKT-NwQPVRSQRLMMWAGRFGKQEEFMDVLGSKHFEQQQSASHTSTLLDAAAEVGLDVEAAAAFLETDE 104
                  56777888889999998887.44999*********************************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 483.88
//
Query:       MMETSP1325-20131115|13410_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 321.02
//
Query:       MMETSP1325-20131115|13411_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        91  (0.00665594); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.35s 00:00:00.62 Elapsed: 00:00:00.52
# Mc/sec: 147.47
//
Query:       MMETSP1325-20131115|13407_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.8   0.4      0.061   13.2   0.0    1.8  2  PF11239.3 Protein of unknown function (DUF3040)
       0.55    9.5   3.0        1.4    8.3   2.1    1.7  1  PF11772.3 DNA-directed RNA polymerase subunit beta


Domain annotation for each model (and alignments):
>> PF11239.3  Protein of unknown function (DUF3040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.31   2.1e+03      46      55 ..      38      47 ..      13      56 .. 0.55
   2 ?   13.2   0.0     9e-06     0.061      21      61 ..      96     135 ..      87     143 .. 0.79

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.31
    PF11239.3 46 vllavlGlvl 55
                 +lla l+l+ 
  MMETSP1325-20131115|13407_1 38 TLLATLALAF 47
                 2222222211 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 9e-06
    PF11239.3  21 eDPklasavesgrrrraserrivlgvllavlGlvllvaGvv 61 
                    P la++ve+ + ++a+    ++g l+av+G+v +++G +
  MMETSP1325-20131115|13407_1  96 PNPYLAAQVEQ-QVSAAAWSPTIVGSLCAVMGVVGMMVGFA 135
                  5799******9.44444445558***************986 PP

>> PF11772.3  DNA-directed RNA polymerase subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.1    0.0002       1.4       3      21 ..     117     135 ..     116     138 .. 0.92

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0002
    PF11772.3   3 iVilLavlalviGlmvGYg 21 
                  iV  L++++ v+G mvG++
  MMETSP1325-20131115|13407_1 117 IVGSLCAVMGVVGMMVGFA 135
                  7889*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       348  (0.0254535); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 1150.25
//
Query:       MMETSP1325-20131115|13413_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 346.71
//
Query:       MMETSP1325-20131115|13412_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      154  (0.0112639); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 412.71
//
Query:       MMETSP1325-20131115|13414_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.35s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|13415_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       166  (0.0121416); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 449.32
//
Query:       MMETSP1325-20131115|13427_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-22   79.2   0.3    3.2e-22   78.8   0.2    1.3  1  PF10637.4 Oxoglutarate and iron-dependent oxygenase degradation C-term


Domain annotation for each model (and alignments):
>> PF10637.4  Oxoglutarate and iron-dependent oxygenase degradation C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.2   2.4e-26   3.2e-22     206     262 ..       2      58 ..       1      71 [. 0.91

  Alignments for each domain:
  == domain 1    score: 78.8 bits;  conditional E-value: 2.4e-26
                  ----EEEEE---EEEEEEEEE-TTEEEEE----TT-SS-EEEEEEEEEEEE------ CS
    PF10637.4 206 eddevLltlapswNslslvlRdegvlkFvKYvsasakgsRWdvsgeyevkaleeeee 262
                  +d  +Ll++++s N+lslvlRd+gv++F+KYvsa+a+gsRWd+ +e+ev+ +e+++e
  MMETSP1325-20131115|13427_1   2 DDGTELLSVQASSNTLSLVLRDSGVMRFTKYVSAAAPGSRWDIAAEFEVEIEEDDDE 58 
                  67789*********************************************9766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       317  (0.0231861); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|13429_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-08   32.5   5.5    9.5e-08   32.1   3.8    1.3  1  PF02176.13 TRAF-type zinc finger


Domain annotation for each model (and alignments):
>> PF02176.13  TRAF-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   3.8     7e-12   9.5e-08       1      52 [.       5      53 ..       3      58 .] 0.89

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 7e-12
                 ----.---S--B-TT--S-B.--SSSSTTTTTTS-TTS----S-....----- CS
   PF02176.13  1 Hqkt.CpfapvpCpnqcckkkilRedledHleedCpkrevkCkfkevGCkvkv 52
                 H+   C +  vpCp++c +k +  ++l+ H++++C  r+++C +   GC  ++
  MMETSP1325-20131115|13429_1  5 HLRDdCTRRFVPCPKRCKVK-VRANELDHHIANECGMRKIQCLN---GCGATI 53
                 66656**********88877.999********************...**9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 283.65
//
Query:       MMETSP1325-20131115|13428_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 401.02
//
Query:       MMETSP1325-20131115|13423_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-35  120.8   1.6    7.5e-35  120.3   1.1    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.3   1.1   5.5e-39   7.5e-35       2     154 ..      46     196 ..      45     198 .. 0.77

  Alignments for each domain:
  == domain 1    score: 120.3 bits;  conditional E-value: 5.5e-39
                  XXXXXXXXXXXXXXXXXXX.---....-TTTTT--------TTT--------------...----S--TT--........STT.-------S-TT.THHHH---HHHHHHHHTT-----------------------------------STTT----TTTTT------ CS
   PF00504.16   2 paeldgslpgdlgfDplglskdp....tlkrlreaEliHGRvAMlavlGalvpelltk...lsaaskfaelpa.......wae.agglslptllalqillligflelareqelkapesegsekraypGglgfdplglakdeeekaelklkEiknGRlAMiaflgfvvq 154
                  p++ldgsl+gd gfDplgls+ +    +l ++reaEl+H+RvAMla++G+l+ e  +    +       e+ +       w+  a+    p  +a + l+++ ++e+ +   + a  ++g       G++gf+plg++    ++ e+++kEi nGRlAM+a +g+++q
  MMETSP1325-20131115|13423_1  46 PKNLDGSLAGDAGFDPLGLSEIEgigaDLYWMREAELKHARVAMLATVGVLFVEGCGSmpgF------PEGKGmsqtdvfWDVwAE---HPNYIA-AALVFFTVIEVISGVATTAGRESG---LRDAGDFGFNPLGFK----DTMEMRTKEIANGRLAMLAAAGMIMQ 196
                  899*****************6557999***************************77774442......222221123355443333...666666.778888888887666654443333...4457*********96....7899********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 1036.79
//
Query:       MMETSP1325-20131115|13432_1  [L=32]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      148  (0.010825); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.27u 0.38s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 150.36
//
Query:       MMETSP1325-20131115|13433_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       287  (0.0209918); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|13421_1  [L=402]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-09   37.6   0.1    2.3e-09   37.2   0.0    1.1  1  PF07998.6  Peptidase family M54
  ------ inclusion threshold ------
      0.024   14.0   0.1      0.037   13.4   0.0    1.2  1  PF11350.3  Protein of unknown function (DUF3152)
      0.025   14.2   0.0      0.043   13.4   0.0    1.4  1  PF00413.19 Matrixin
      0.065   12.7   0.1        0.1   12.0   0.1    1.2  1  PF05572.8  Pregnancy-associated plasma protein-A
      0.087   12.7   0.1       0.14   12.1   0.1    1.2  1  PF13574.1  Metallo-peptidase family M12B Reprolysin-like
      0.097   12.0   0.0       0.15   11.4   0.0    1.2  1  PF13583.1  Metallo-peptidase family M12B Reprolysin-like
      0.099   12.4   0.1       0.14   11.9   0.1    1.2  1  PF13688.1  Metallo-peptidase family M84
       0.14   12.5   0.0        0.2   12.0   0.0    1.3  1  PF13582.1  Metallo-peptidase family M12B Reprolysin-like


Domain annotation for each model (and alignments):
>> PF07998.6  Peptidase family M54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   1.3e-12   2.3e-09      61     185 ..     138     264 ..     112     272 .. 0.79

  Alignments for each domain:
  == domain 1    score: 37.2 bits;  conditional E-value: 1.3e-12
                  B-S----EEHHHHHHHH-------..SEE........E--BSS-EE....------B---B-----BB--B-T.--.....SHHHHHHHHHHHHHHH----------S-.TSTTS--SSHHHHHHS-SS-- CS
    PF07998.6  61 vkmyrleavveallgkLkemkddvndDsitkifgittlplgsrdqy....idiykkvlGievsiGnyavlals.ikefytedkeLflervvkevlhelGhlyGLshCke.dCvmnfsndlkdvDrkapkyC 185
                   + y  +++ + + + L + k     D++  ++g t   +++  +y    ++++++v+G +       + + +   +       +f +r    + he+Ghl+G+ hC   +C mn  n l++ + +    C
  MMETSP1325-20131115|13421_1 138 GSGYGPQYLTNEIHDLLTKHK---PRDAF-VLVGYTMCDITKAVRYpsgeVEVWNFVFGEACVDKGTGIFSFArYRDGAGAADSVFTRRCCMVLNHEVGHLFGIKHCIYaKCLMNGCNHLEESEDRPFALC 264
                  455566777777777777666...45666.68999999999999996666789******9876666778888755556677889***********************999************998877777 PP

>> PF11350.3  Protein of unknown function (DUF3152)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.2e-05     0.037     126     157 ..     209     240 ..     188     250 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.2e-05
    PF11350.3 126 vrgavefegdlgsYRqyliNHEVGHalGygHe 157
                    ga + +   +    +++NHEVGH +G +H 
  MMETSP1325-20131115|13421_1 209 RDGAGAADSVFTRRCCMVLNHEVGHLFGIKHC 240
                  5555555444455556899**********995 PP

>> PF00413.19  Matrixin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.5e-05     0.043     104     131 ..     223     250 ..     183     268 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 2.5e-05
                  HHHHHHHH----------SSTTSTTSSB CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00413.19 104 lflVaaHEiGHalGLeHssdkdalmypl 131
                    +V  HE+GH+ G++H    + lm  +
  MMETSP1325-20131115|13421_1 223 CCMVLNHEVGHLFGIKHCIYAKCLMNGC 250
                  56899*************9999999765 PP

>> PF05572.8  Pregnancy-associated plasma protein-A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   5.9e-05       0.1      68      93 ..     222     247 ..     208     277 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 5.9e-05
    PF05572.8  68 nfasvltHelGHflgLrHtFegdCer 93 
                      vl He+GH +g++H     C  
  MMETSP1325-20131115|13421_1 222 RCCMVLNHEVGHLFGIKHCIYAKCLM 247
                  45689*************99999853 PP

>> PF13574.1  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1     8e-05      0.14     112     132 ..     223     248 ..     183     262 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 8e-05
    PF13574.1 112 eidvvaHElGHqfGanHdft.....s 132
                     v+ HE+GH fG +H        +
  MMETSP1325-20131115|13421_1 223 CCMVLNHEVGHLFGIKHCIYakclmN 248
                  456789***********988443332 PP

>> PF13583.1  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   8.6e-05      0.15     133     156 ..     219     242 ..     191     269 .. 0.74

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8.6e-05
    PF13583.1 133 kitkeydivaHEiGHlfGaaHdlt 156
                   ++    ++ HE+GHlfG +H + 
  MMETSP1325-20131115|13421_1 219 FTRRCCMVLNHEVGHLFGIKHCIY 242
                  4555567899***********775 PP

>> PF13688.1  Metallo-peptidase family M84
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   8.2e-05      0.14     139     164 ..     220     245 ..     147     269 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.2e-05
    PF13688.1 139 tstewqvvaHElGHnfGavHDcdsss 164
                  t+    v+ HE+GH fG +H   +++
  MMETSP1325-20131115|13421_1 220 TRRCCMVLNHEVGHLFGIKHCIYAKC 245
                  6677899*************655554 PP

>> PF13582.1  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00012       0.2     108     123 ..     217     239 ..     145     240 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00012
    PF13582.1 108 a.......dtvaHEiGHqfGanH 123
                           ++ HE+GH+fG +H
  MMETSP1325-20131115|13421_1 217 SvftrrccMVLNHEVGHLFGIKH 239
                  134456668999**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.70u 0.37s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 1817.61
//
Query:       MMETSP1325-20131115|13434_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|13431_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1392.88
//
Query:       MMETSP1325-20131115|13440_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.54
# Mc/sec: 173.07
//
Query:       MMETSP1325-20131115|13451_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.1   0.0       0.04   13.5   0.0    1.2  1  PF02617.12 ATP-dependent Clp protease adaptor protein ClpS


Domain annotation for each model (and alignments):
>> PF02617.12  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.9e-06      0.04      18      62 ..      98     142 ..      94     154 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 2.9e-06
   PF02617.12  18 tmefVievLqkvfgmteeqAeqimlevhreGravvgvgtleeaet 62 
                  t+++V+  L+   +m e +A+++++ + ++G + +g+ +++e+  
  MMETSP1325-20131115|13451_1  98 TVSYVVGQLCYTLQMPETDAMEHATFAQEQGLSCLGTWSRKECLD 142
                  789**************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.54
# Mc/sec: 820.97
//
Query:       MMETSP1325-20131115|13457_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       180  (0.0131656); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|13448_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-19   67.8   6.1    1.3e-18   66.8   4.2    1.5  1  PF05405.9 Mitochondrial ATP synthase B chain precursor (ATP-synt_B)


Domain annotation for each model (and alignments):
>> PF05405.9  Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   4.2   9.4e-23   1.3e-18       5     162 ..      91     249 ..      87     250 .. 0.97

  Alignments for each domain:
  == domain 1    score: 66.8 bits;  conditional E-value: 9.4e-23
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------TTTTTTTTTTTSSTTHHHHTTTHHHHHHTHHHHTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHS-G..GGSHCCHHHHHH CS
    PF05405.9   5 liSkeiyvvneEtivalcfigflilvakslgpsikefldkriekiqeelnqsrnekekalkerieqqkklqslveetksLfevskeqvaleaeaaerelqaklareikkkldtlveaessrrqrlQdelvkgvissVlkelsnpk.fkkktlqesiadl 162
                  l+ ++ +++ eE  ++ cf++f+  v+  +g++i + ld++ e++ +  n+  + ++ a k  ie +++  slv+e k +   + e + ++a a + elq+ l++ i+kkl+ ++++e+++r  +Q el++   + V ++++ +k +++k+l +++ ++
  MMETSP1325-20131115|13448_1  91 LLQNQVLILSEELQLLGCFMVFVGSVYSQAGDAIGKALDEKGEAVMAAHNEQEQVQILAAKAVIEAHEQKLSLVDEMKAIHSTQAELLSMLADAKSMELQYMLKADIEKKLNFVLQKEENFRAAQQAELAEAASAAVTAQFAGDKdLQAKALTQALDSI 249
                  677899*****************************************************************************************************************************************999********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       921  (0.067364); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.49
# Mc/sec: 1574.75
//
Query:       MMETSP1325-20131115|13464_1  [L=146]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.075   12.4   1.6      0.091   12.1   1.1    1.2  1  PF05084.8 Granule antigen protein (GRA6)


Domain annotation for each model (and alignments):
>> PF05084.8  Granule antigen protein (GRA6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.1   6.7e-06     0.091      67     139 ..      66     140 ..      29     146 .] 0.74

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 6.7e-06
    PF05084.8  67 GtsedyvnsselaGsrddslaeddeeaeevegdvdPfsvlaeerkaearvqsleeri..eeaddrrkyssvreav 139
                   t  + v+s+  + + +d+ a    ++++   d++  s+ +  + a a++q+++e +  e + +rr  + v+ + 
  MMETSP1325-20131115|13464_1  66 CTEGEAVDSASSGLAPGDAAAGSPVTTAALFKDIQKDSLDTPVKDAIANGQVKKEVVrdEKKSTRRLSVKVKAPP 140
                  3556889999999999**************************************977214555566666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       290  (0.0212112); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 699.74
//
Query:       MMETSP1325-20131115|13465_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       460  (0.0336454); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.33s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 1413.36
//
Query:       MMETSP1325-20131115|13480_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.66    9.9   3.1        2.8    7.9   0.4    2.9  2  PF07719.12 Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.4   0.00021       2.8       2      30 ..      46      74 ..      45      76 .. 0.93
   2 ?    0.6   0.1     0.043   5.9e+02      12      23 ..     161     172 .]     159     172 .] 0.78

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.00021
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
   PF07719.12  2 ealynlGlayyklgdyeeAleafekAlel 30
                 ++l + G++++ ++++ eA +a   A+++
  MMETSP1325-20131115|13480_1 46 KWLDRAGQSAEMKRRLREAYAAILAAIKH 74
                 68999*********************996 PP

  == domain 2    score: 0.6 bits;  conditional E-value: 0.043
                  HHTT-HHHHHHH CS
   PF07719.12  12 yklgdyeeAlea 23 
                  ++l+++e A+++
  MMETSP1325-20131115|13480_1 161 RALRNFEGAIAY 172
                  578899999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 876.96
//
Query:       MMETSP1325-20131115|13479_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0072   15.4   0.1      0.008   15.3   0.1    1.0  1  PF05435.6 Phi-29 DNA terminal protein GP3
  ------ inclusion threshold ------
      0.055   13.5   0.2       0.11   12.6   0.1    1.6  1  PF11871.3 Domain of unknown function (DUF3391)


Domain annotation for each model (and alignments):
>> PF05435.6  Phi-29 DNA terminal protein GP3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   1.2e-06     0.008     135     211 ..      14      92 ..       4      95 .. 0.84

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.2e-06
    PF05435.6 135 skadvtGisriedfdfdkvrtyerlrtleesmkkradedyyekklrqlqdnfik.sve..gsfnsddeadelveklkkiP 211
                   +  v+G++  + f+   vrt++++++l+ +   +a e   + + ++  +n i+ s+   + f s  +ade+ + l k  
  MMETSP1325-20131115|13479_1  14 NEVVVKGLANNRAFQQFAVRTQSKIDNLKSEGVSKATEGIKNSEGVKNAQNIIQqSLAdaNKFGS-MLADEVKKDLAKAA 92 
                  45569*************************************99999******975541145777.89***999987755 PP

>> PF11871.3  Domain of unknown function (DUF3391)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.6e-05      0.11      26      53 ..      23      50 ..      15      95 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 1.6e-05
    PF11871.3 26 hpfllqsflikseadierlrasgvkeVy 53
                 +++ +q+f +++++ i+ l+++gv +  
  MMETSP1325-20131115|13479_1 23 NNRAFQQFAVRTQSKIDNLKSEGVSKAT 50
                 67899*******************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       645  (0.0471767); expected 273.4 (0.02)
Passed bias filter:                      476  (0.0348157); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 460.10
//
Query:       MMETSP1325-20131115|13472_1  [L=291]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-37  128.5   0.0    3.5e-37  127.9   0.0    1.3  1  PF00504.16 Chlorophyll A-B binding protein
  ------ inclusion threshold ------
      0.069   12.9   1.0         17    5.3   0.0    3.1  3  PF11146.3  Protein of unknown function (DUF2905)
          3    7.6   7.7        9.6    6.0   1.8    3.2  4  PF13670.1  Peptidase propeptide and YPEB domain


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.9   0.0   7.8e-41   3.5e-37       2     155 ..      57     226 ..      56     227 .. 0.85

  Alignments for each domain:
  == domain 1    score: 127.9 bits;  conditional E-value: 7.8e-41
                  XXXXXXXXXXXXXXXXXXX.-.--....................-TTTTT--------TTT------------------S--TT--..STT---..----S-TT.THHHH---HHHHHHHHTT-----------------------------------STTT----TTTTT------- CS
   PF00504.16   2 paeldgslpgdlgfDplglsk.dp....................tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpa.waeagg..lslptllalqillligflelareqelkapesegsekraypGglgfdplglakdeeekaelklkEiknGRlAMiaflgfvvqa 155
                  pa  dgslpgd+gfDplgls+ dp                    t+ ++reaEl+HGR++Mla++G+++ ++++++++a+   e+++ +a a +  +++  ++  + ++++g++el + + + a +     +   pG+++ dpl++ +d++ k+++kl+Ei+++RlAM+af g++ qa
  MMETSP1325-20131115|13472_1  57 PAGCDGSLPGDVGFDPLGLSSiDPkslpqiipeaavqaaaeplpTMYWMREAELKHGRLCMLAIVGCITVDAGIHFPGAK--YEGLSsVA-AHDamVDSGNMG--FLFTMVGIIELISGTAIAAAQA---GSGREPGDFALDPLKFCEDPALKEKYKLAEITHARLAMLAFSGLITQA 226
                  7789****************656689************************************************988743..34555233.222212344444..689999*****99998876544...35789*****************************************98 PP

>> PF11146.3  Protein of unknown function (DUF2905)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0052        24      17      37 ..      49      71 ..      38      76 .. 0.73
   2 ?   -2.2   0.0      0.83   3.8e+03       4      20 ..     117     133 ..     113     138 .. 0.73
   3 ?    5.3   0.0    0.0037        17       4      36 ..     158     189 ..     155     194 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.8 bits;  conditional E-value: 0.0052
    PF11146.3 17 lllpllkk.lpl.GrLPGDirie 37
                 +++p+l +  +  G LPGD+ ++
  MMETSP1325-20131115|13472_1 49 AAIPFLPNpAGCdGSLPGDVGFD 71
                 5667775524546******9875 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.83
    PF11146.3   4 lLivlglvllvlglllp 20 
                  +L ++g++++ +g+ +p
  MMETSP1325-20131115|13472_1 117 MLAIVGCITVDAGIHFP 133
                  57788888888887776 PP

  == domain 3    score: 5.3 bits;  conditional E-value: 0.0037
    PF11146.3   4 lLivlglvllvlglllpllkklplGrLPGDiri 36 
                  l+ ++g++ l+ g ++ +++  + Gr PGD+++
  MMETSP1325-20131115|13472_1 158 LFTMVGIIELISGTAIAAAQA-GSGREPGDFAL 189
                  667788888888888888855.78******987 PP

>> PF13670.1  Peptidase propeptide and YPEB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   1.8    0.0021       9.6       3      26 ..      19      43 ..      17      51 .. 0.75
   2 ?   -3.2   0.0       1.6   7.4e+03      19      33 ..      95     109 ..      86     112 .. 0.50
   3 ?   -1.8   0.0      0.56   2.6e+03      12      25 ..     172     185 ..     160     191 .. 0.54
   4 ?    2.5   0.0     0.027   1.2e+02      54      68 ..     245     259 ..     239     260 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0021
    PF13670.1  3 alalaaallaaaAlA.kddtdapka 26
                 +++la+++++aaA+A ++ t+ +++
  MMETSP1325-20131115|13472_1 19 TIVLALCAASAAAFApRSATRGMVS 43
                 6899***********7766666655 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 1.6
    PF13670.1  19 ddtdapkadwlsrea 33 
                    +  p+  w+ +++
  MMETSP1325-20131115|13472_1  95 AAEPLPTMYWMREAE 109
                  334556666665555 PP

  == domain 3    score: -1.8 bits;  conditional E-value: 0.56
    PF13670.1  12 a.aaAlAkddtdapk 25 
                  a aaA+A  + ++p+
  MMETSP1325-20131115|13472_1 172 AiAAAQA-GSGREPG 185
                  1244444.5555555 PP

  == domain 4    score: 2.5 bits;  conditional E-value: 0.027
    PF13670.1  54 gcyEvegidkdGkkv 68 
                   c+Ev+gi+ dG +v
  MMETSP1325-20131115|13472_1 245 SCFEVKGICTDGLQV 259
                  59**********875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.51
# Mc/sec: 1367.33
//
Query:       MMETSP1325-20131115|13474_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-64  214.6   0.6    9.3e-64  214.0   0.4    1.3  1  PF01294.13 Ribosomal protein L13e


Domain annotation for each model (and alignments):
>> PF01294.13  Ribosomal protein L13e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.0   0.4   6.8e-68   9.3e-64       2     178 ..       1     189 [.       1     190 [. 0.92

  Alignments for each domain:
  == domain 1    score: 214.0 bits;  conditional E-value: 6.8e-68
   PF01294.13   2 vilknhfkkkWq......e....rvktwfnqparkvrrrkarqkkakkiaPrPaaGalrPvvraptlkynkkvraGrGfsleelkaaGinkkfartiGiavdhrrrnrsleslqanvqrlkeyksklilfPrkakkpk..agdseaeevkkatqlkgpvlPikreakrvelrkvtkeekkfkafaklrl 178
                  +i+++hf+kkW            +v  wf+q+ +k +rr  r++k ++iaPrP+ GalrPvv++pt+kyn kvr GrGfsleelkaaGi++kfa+tiGi+vd+rr n+s e++  nv+rl+eyk+klilfP+k+++ +   +ds+ ee++ a+ql+g v Pi++ + +  + +vt+e++ ++  +++rl
  MMETSP1325-20131115|13474_1   1 MIPNQHFHKKWAggasghArgplHVVSWFDQAPKKKSRRLKRTAKQAAIAPRPTGGALRPVVHCPTIKYNSKVRLGRGFSLEELKAAGIPPKFAKTIGICVDKRRVNKSEEAMAVNVARLNEYKAKLILFPKKGAAKNgpIADSSKEECAGAAQLQGVVQPISKPEIEYPMMAVTEEMRAVNQRSTMRL 189
                  799********743333303444899**********************************************************************************************************98766523789*************************************999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       288  (0.021065); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 1139.60
//
Query:       MMETSP1325-20131115|13482_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-07   30.1   4.7    0.00041   19.7   0.2    2.2  2  PF12799.2  Leucine Rich repeats (2 copies)
    2.1e-05   24.0   3.9     0.0019   17.7   1.7    2.1  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.028   14.0   0.0      0.041   13.5   0.0    1.4  1  PF08519.7  Replication factor RFC1 C terminal domain
      0.061   12.9   0.2      0.085   12.4   0.2    1.1  1  PF13306.1  Leucine rich repeats (6 copies)
       0.21   11.6   4.1        3.2    8.0   0.2    2.9  3  PF00560.28 Leucine Rich Repeat
       0.54   10.3   3.5        1.8    8.7   0.1    2.8  3  PF13516.1  Leucine Rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.2   1.8e-07   0.00041       2      42 ..      39      80 ..      38      82 .. 0.91
   2 !   12.0   0.5   4.6e-05      0.11       2      20 ..      85     102 ..      84     104 .. 0.83

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1.8e-07
    PF12799.2  2 nLevLdLsnNnIkdlppela.nLpnLktLnLsnNpisdlsaL 42
                 +Le+++L +  +++++++l+  +++Lk ++L+nN i  +++L
  MMETSP1325-20131115|13482_1 39 SLEEISLHQEELESIGEVLGtTCRKLKIIYLQNNIIPRMENL 80
                 79***************99637************99999888 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 4.6e-05
    PF12799.2   2 nLevLdLsnNnIkdlppel 20 
                   Le+L+L+ NnI+++++ l
  MMETSP1325-20131115|13482_1  85 ELEYLNLALNNISKIEG-L 102
                  69999999999999988.6 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   4.4e-05       0.1      25      59 ..      38      72 ..      34      74 .. 0.68
   2 !   17.7   1.7   8.3e-07    0.0019       2      41 ..      63     100 ..      62     104 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 4.4e-05
    PF13855.1 25 snLkvLdLsgnnlksispeafkgLpsLreLnLsgN 59
                 s+L++++L+  +l+si + +   +++L+ ++L++N
  MMETSP1325-20131115|13482_1 38 SSLEEISLHQEELESIGEVLGTTCRKLKIIYLQNN 72
                 56777777777777777777777777777777766 PP

  == domain 2    score: 17.7 bits;  conditional E-value: 8.3e-07
    PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksis 41 
                  +Lk ++L+nN + ++  + +++++ L++L+L  nn++ i+
  MMETSP1325-20131115|13482_1  63 KLKIIYLQNNIIPRM--ENLHHMKELEYLNLALNNISKIE 100
                  79********44455..58*****************9997 PP

>> PF08519.7  Replication factor RFC1 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.8e-05     0.041      86     130 ..      15      58 ..       1      75 [. 0.79

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 1.8e-05
    PF08519.7  86 lplllekltkpLleegkdaieevielmdeYeltkedldnivelsk 130
                     ++ +lt+ L ++ ++  e +i+ ++e +l +e+l++i e+ +
  MMETSP1325-20131115|13482_1  15 Q-PIMPHLTRALIRKRAEHNEGIISSLEEISLHQEELESIGEVLG 58 
                  3.344568999999999999*********************9983 PP

>> PF13306.1  Leucine rich repeats (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   3.7e-05     0.085      35      95 ..      38      99 ..      35     103 .. 0.57

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.7e-05
    PF13306.1 35 sslksitlps.slteigeyaFsncssltsitipssltsigenaFsncsslksinip.ssltti 95
                 ssl++i+l + +l++ige     c++l+ i +++++    en    +++l+ +n+  +++++i
  MMETSP1325-20131115|13482_1 38 SSLEEISLHQeELESIGEVLGTTCRKLKIIYLQNNIIPRMENLHH-MKELEYLNLAlNNISKI 99
                 456666664424666666666666666666666666666565555.66666666542344444 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.6     6e+03       1       7 [.      39      45 ..      39      47 .. 0.77
   2 ?    4.1   0.0     0.026        60       1      13 [.      63      75 ..      63      83 .. 0.79
   3 ?    8.0   0.2    0.0014       3.2       2      17 ..      86     101 ..      85     104 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.0 bits;  conditional E-value: 2.6
                 TESEEEE CS
   PF00560.28  1 nLeeLdL 7 
                 +Lee++L
  MMETSP1325-20131115|13482_1 39 SLEEISL 45
                 6899988 PP

  == domain 2    score: 4.1 bits;  conditional E-value: 0.026
                 TESEEEETSSBCB CS
   PF00560.28  1 nLeeLdLsgNnlt 13
                 +L++++L++N + 
  MMETSP1325-20131115|13482_1 63 KLKIIYLQNNIIP 75
                 69********765 PP

  == domain 3    score: 8.0 bits;  conditional E-value: 0.0014
                  ESEEEETSSBCBCHHH CS
   PF00560.28   2 LeeLdLsgNnltslpp 17 
                  Le+L+L  Nn++++  
  MMETSP1325-20131115|13482_1  86 LEYLNLALNNISKIEG 101
                  9***********9865 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.7   3.8e+03       3      10 ..      39      46 ..      37      55 .. 0.56
   2 ?    1.3   0.1      0.19   4.4e+02       1      12 [.      61      72 ..      61      74 .. 0.88
   3 ?    8.7   0.1    0.0008       1.8       2      19 ..      84     102 ..      83     104 .. 0.80

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 1.7
    PF13516.1  3 nLtsLdLs 10
                 +L+++ L 
  MMETSP1325-20131115|13482_1 39 SLEEISLH 46
                 56665554 PP

  == domain 2    score: 1.3 bits;  conditional E-value: 0.19
    PF13516.1  1 lknLtsLdLsnN 12
                 + +L+ + L+nN
  MMETSP1325-20131115|13482_1 61 CRKLKIIYLQNN 72
                 8999*******9 PP

  == domain 3    score: 8.7 bits;  conditional E-value: 0.0008
    PF13516.1   2 knLtsLdLsnNqigd.eGl 19 
                  k L++L+L  N+i++ eGl
  MMETSP1325-20131115|13482_1  84 KELEYLNLALNNISKiEGL 102
                  569**********995555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       303  (0.0221621); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 493.37
//
Query:       MMETSP1325-20131115|13482_2  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       153  (0.0111908); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 465.96
//
Query:       MMETSP1325-20131115|13484_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-06   27.9   0.2    1.5e-06   27.7   0.1    1.1  1  PF00226.26 DnaJ domain
  ------ inclusion threshold ------
      0.024   14.3   0.0      0.027   14.1   0.0    1.2  1  PF03656.8  Pam16
       0.12   12.4   0.0       0.14   12.2   0.0    1.1  1  PF00804.20 Syntaxin


Domain annotation for each model (and alignments):
>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.1   3.2e-10   1.5e-06      11      62 ..       3      49 ..       1      51 [. 0.90

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 3.2e-10
                 T--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHHTSHHHHHH CS
   PF00226.26 11 dasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevLsdpekrae 62
                 +a  e+Ik+++r+  +  HPDk  +++    +   +ineA e L +   ra 
  MMETSP1325-20131115|13484_1  3 SAKVEKIKESHRRILMANHPDK-GGSP----YVATKINEAKELLLKAAARAA 49
                 68889*****************.8888....9************99888875 PP

>> PF03656.8  Pam16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.9e-06     0.027      71     107 ..       5      41 ..       1      54 [. 0.87

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 5.9e-06
    PF03656.8  71 nreevekryehlfevndkskGGslylqskvfrakerl 107
                  + e++++ +  ++  n  +kGGs y+ +k+  ake l
  MMETSP1325-20131115|13484_1   5 KVEKIKESHRRILMANHPDKGGSPYVATKINEAKELL 41 
                  579999*****************************77 PP

>> PF00804.20  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     3e-05      0.14      21      41 ..       4      35 ..       3      53 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3e-05
   PF00804.20 21 ekveelkrlhsrilaspdpd...........k 41
                  kve++k+ h+ril+++ pd           +
  MMETSP1325-20131115|13484_1  4 AKVEKIKESHRRILMANHPDkggspyvatkiN 35
                 79****************99777755543332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       407  (0.0297689); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 289.37
//
Query:       MMETSP1325-20131115|13485_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 878.66
//
Query:       MMETSP1325-20131115|13487_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.12   11.9   0.0    1.0  1  PF08566.5 Mitochondrial import protein Pam17


Domain annotation for each model (and alignments):
>> PF08566.5  Mitochondrial import protein Pam17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.6e-06      0.12      38     101 ..      12      74 ..       1      78 [. 0.85

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.6e-06
    PF08566.5  38 krrrinllssvvtallgaalglaylstleldeleqqilgldplvvlglatiasgalGyLlGpii 101
                  +r r++++ +   +  + ++++ +l   e+ +l + i+g+     +gl ++  galG+ +G + 
  MMETSP1325-20131115|13487_1  12 RRTRFQFIEATYESTYSIMIAACILVFGEISKLDRSIVGVALWWNVGLSVL-GGALGHWIGAAC 74 
                  57899999********************************88887777665.688999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 334.66
//
Query:       MMETSP1325-20131115|13488_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       495  (0.0362054); expected 273.4 (0.02)
Passed bias filter:                      419  (0.0306466); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 410.80
//
Query:       MMETSP1325-20131115|13490_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 332.83
//
Query:       MMETSP1325-20131115|13491_1  [L=284]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.2e-05   21.8   0.0    6.7e-05   21.4   0.0    1.2  1  PF03254.8 Xyloglucan fucosyltransferase


Domain annotation for each model (and alignments):
>> PF03254.8  Xyloglucan fucosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   4.9e-09   6.7e-05     228     435 ..      39     238 ..      27     268 .. 0.70

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 4.9e-09
    PF03254.8 228 cdedqsllekvpwlilksdsyfvpslflvpsfeeelsklfPeketvfhhlgrYLfhPsnkvWglvtryyeaylakaderiGiqvrvfdekaepfqevldqilaCtqkekllPevtdteee..aaasaskekkskavlvtslkseyyeklknmyw.ekptatgevvsvyqPsheekqqtekklhnqkAlaeiyllslsdvlvtsawstfGYv 435
                  c++  +ll+  +++ +  ++yf+p + ++p++ + l++ +   +  f  l  +L++Ps +v + ++r+   y+   ++ iG+ + v +++   +    d+ +  +q++ ++ + ++  +e   ++++ +++ +  + vt  + +  +k +++   ++ + t  vv++  Ps +   +++ +      + e++ll++++ ++t+  s +G +
  MMETSP1325-20131115|13491_1  39 CKNLGELLKVHKFVKITNQNYFMPLIQMNPHYSDMLESELTLSQ-SFADLFNFLLRPSATVLESIERFKARYMD-GNRVIGMEMSVEKSDGDWT---GDDAMPDAQQNLFFSHAAQLIKEtdDQVAPGSTEGVVFMFVTDNHGQLQNKFEELESsDNNAITAGVVAILAPSGHGVSRVQLE------IQELWLLGYAEYIMTTPGSRIGIL 238
                  55556667666777788899****************99887655.5999***********************96.6899***999876544332...244444444444443332222221112333344444555667777777777766644145667778888888888777766554......456777777777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.59
# Mc/sec: 1153.50
//
Query:       MMETSP1325-20131115|13497_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.087   10.8   0.0      0.091   10.8   0.0    1.0  1  PF07778.6 Mis6


Domain annotation for each model (and alignments):
>> PF07778.6  Mis6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   6.7e-06     0.091     375     405 ..      21      51 ..       8      53 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 6.7e-06
    PF07778.6 375 lRldeWlsqtLqeelvlyvvsnnqeeeelln 405
                    l++W+  + q+el++ +  + q++++lln
  MMETSP1325-20131115|13497_1  21 VALKDWVAGCAQDELAWASSAERQQGNLLLN 51 
                  5699**********************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 244.16
//
Query:       MMETSP1325-20131115|13498_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       453  (0.0331334); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 392.51
//
Query:       MMETSP1325-20131115|13499_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      126  (0.00921592); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 244.24
//
Query:       MMETSP1325-20131115|13504_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       229  (0.0167496); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.55
# Mc/sec: 440.06
//
Query:       MMETSP1325-20131115|13508_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.66
# Mc/sec: 268.68
//
Query:       MMETSP1325-20131115|13509_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0047   16.8   0.1     0.0052   16.6   0.1    1.1  1  PF00652.17 Ricin-type beta-trefoil lectin domain
  ------ inclusion threshold ------
      0.018   14.9   0.1      0.021   14.6   0.1    1.1  1  PF02793.17 Hormone receptor domain


Domain annotation for each model (and alignments):
>> PF00652.17  Ricin-type beta-trefoil lectin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   7.6e-07    0.0052      69     119 ..       3      56 ..       1      60 [. 0.76

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 7.6e-07
                  EEEEES-T.TGGG..G-EEEETTTEEEEST.CEEEEEEGCTSCCTCEEEEEE--- CS
   PF00652.17  69 vqlascns.gssn..qrWtydengtivnrk.sglcLdvkgasngtkvilqecngs 119
                  v l +c + ++++   rW+ ++ ++iv+ + +g+c+ + +++++++v+l++c+  
  MMETSP1325-20131115|13509_1   3 VSLVDCGGlDDTAslIRWDDEQ-QQIVSDScPGMCVHAGSSEQDGPVVLKPCTAA 56 
                  6788888855555555666555.99999999999999988779999999999644 PP

>> PF02793.17  Hormone receptor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   3.1e-06     0.021      11      55 ..      17      62 ..      11      66 .] 0.79

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 3.1e-06
   PF02793.17 11 ilcWppapaGevvevpCPeyfsllssdtsg..nasrnCtedGqWsek 55
                 ++ W++ +  ++v+ +CP    + +s +++  ++ + Ct+  +W+++
  MMETSP1325-20131115|13509_1 17 LIRWDDEQ-QQIVSDSCPGMCVHAGSSEQDgpVVLKPCTAASTWNRV 62
                 56666654.589*******9988777665568************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       191  (0.0139702); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|13510_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       192  (0.0140433); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 585.26
//
Query:       MMETSP1325-20131115|13507_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       689  (0.050395); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        58  (0.00424225); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.33s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 231.37
//
Query:       MMETSP1325-20131115|13526_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       222  (0.0162376); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 469.49
//
Query:       MMETSP1325-20131115|13529_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-17   63.7   1.4    1.1e-17   63.7   1.0    1.6  2  PF00538.14 linker histone H1 and H5 family
  ------ inclusion threshold ------
      0.028   14.3   0.0      0.037   13.9   0.0    1.2  1  PF07848.7  PaaX-like protein
      0.063   13.4   0.1      0.095   12.8   0.0    1.3  1  PF08672.6  Anaphase promoting complex (APC) subunit 2
        9.2    5.6  19.0        9.4    5.6  13.2    1.2  1  PF05764.8  YL1 nuclear protein


Domain annotation for each model (and alignments):
>> PF00538.14  linker histone H1 and H5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   1.0   3.2e-21   1.1e-17       5      76 ..       3      66 ..       1      67 [. 0.91
   2 ?   -3.7   1.5       3.6   1.2e+04      31      44 ..      81      94 ..      77     116 .. 0.49

  Alignments for each domain:
  == domain 1    score: 63.7 bits;  conditional E-value: 3.2e-21
                 HHHHHHHHHCCTTTT----HHHHHHHHHCCTTTS--STTHHHHHHHHHHHHHH---EE---..------EES CS
   PF00538.14  5 yseMiveaikalkerkGsSvqaikKyieanykveinasnlasllklaLkkgvksGeLvqvkgtGasGsfkla 76
                 y eMi++ai a k rkG+S  aikKyiea+y+    +   + ll++aLk++v+sG+L+q k      s+kl+
  MMETSP1325-20131115|13529_1  3 YYEMIKAAILADKSRKGTSSVAIKKYIEATYPAVTFK---QHLLRTALKSAVASGKLSQDK-----QSYKLS 66
                 89*****************************855555...7899*****************.....889886 PP

  == domain 2    score: -3.7 bits;  conditional E-value: 3.6
                 HHCCTTTS--STTH CS
   PF00538.14 31 ieanykveinasnl 44
                 ++++ ++++++++ 
  MMETSP1325-20131115|13529_1 81 VKKKAPKKKAPKKK 94
                 44444433333333 PP

>> PF07848.7  PaaX-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.1e-05     0.037      18      68 ..      20      67 ..       8      69 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 1.1e-05
                 TS---HHHHHHHH.S-----HHHHHHHHHHH-----EE-----....-EE-H CS
    PF07848.7 18 ggaiwlgsLirll.aelGiserlvRaalsRlakaGwlvrekegrrsyYrLsd 68
                   ++ +++ i+ +  ++ ++++l+R+al   ++ G l++ k+     Y+Ls+
  MMETSP1325-20131115|13529_1 20 TSSVAIKKYIEATyPAVTFKQHLLRTALKSAVASGKLSQDKQS----YKLSA 67
                 5566666666654146899**********************99....**997 PP

>> PF08672.6  Anaphase promoting complex (APC) subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.8e-05     0.095      30      60 .]      35      65 ..      26      65 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.8e-05
                 -TT--HHHH---HHHHHH---EE-----BEE CS
    PF08672.6 30 gatvsqeeLeefLdklVeegkLevvggsYkl 60
                  +t+ q+ L+  L++ V+ gkL+ + +sYkl
  MMETSP1325-20131115|13529_1 35 AVTFKQHLLRTALKSAVASGKLSQDKQSYKL 65
                 6899**************************8 PP

>> PF05764.8  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  13.2    0.0028       9.4      78     135 ..      66     120 ..      14     126 .] 0.63

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0028
    PF05764.8  78 eegekelekeekekkkkrkkkkaykeplkkkkkkkkkaakkkkaaaeekkkkkerkse 135
                  +++ek   k  k+ kkk +kkka k+++ kkk ++kk+a+kk ++++++kkk + k++
  MMETSP1325-20131115|13529_1  66 SAAEK---KPPKAPKKKVVKKKAPKKKAPKKKAAPKKKAAKKAPKKKAPKKKAAPKKK 120
                  33333...55556666656666666666555555554444444444444444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1125  (0.082285); expected 273.4 (0.02)
Passed bias filter:                      461  (0.0337185); expected 273.4 (0.02)
Passed Vit filter:                        85  (0.00621709); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.59
# Mc/sec: 511.76
//
Query:       MMETSP1325-20131115|13520_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0067   15.7   2.7     0.0072   15.6   1.9    1.1  1  PF07423.6  Protein of unknown function (DUF1510)
  ------ inclusion threshold ------
       0.29   10.3   1.6       0.28   10.3   1.1    1.1  1  PF10643.4  Photosystem P840 reaction-centre cytochrome c-551
        0.5   10.3   2.2        2.5    8.1   1.5    2.1  1  PF14138.1  Cytochrome c oxidase assembly protein COX16
          1    8.3  11.0        1.3    8.0   7.6    1.1  1  PF04641.7  Replication termination factor 2
        1.2    9.0  12.3        1.5    8.7   8.5    1.1  1  PF08432.5  Fungal protein of unknown function (DUF1742)
        1.3    9.3  11.7        2.7    8.3   8.1    1.5  1  PF05957.8  Bacterial protein of unknown function (DUF883)
        1.4    6.7   7.0        1.6    6.5   4.9    1.0  1  PF02724.9  CDC45-like protein
        1.8    7.8   8.4        2.2    7.5   5.8    1.1  1  PF14153.1  Spore coat protein CotO
        2.8    6.7   6.1        3.4    6.4   4.2    1.1  1  PF03896.11 Translocon-associated protein (TRAP), alpha subunit


Domain annotation for each model (and alignments):
>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   1.9   4.7e-06    0.0072      47     101 ..      53     105 ..       2     131 .. 0.43

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 4.7e-06
    PF07423.6  47 deeeeeksedeekteeeevkeeekeaakdedkeddsesekkdeeseeeeeeekek 101
                  de +++k+++e+++ + +++ ++k +a+ + ke + +s+++  +  ++  ++  +
  MMETSP1325-20131115|13520_1  53 DEAADKKKAEEDAKAKAKEEADAKAKAEADAKEAARKSAEDAATAARKVVQD--Q 105
                  2222222222222222222222222222222222222222222222222222..2 PP

>> PF10643.4  Photosystem P840 reaction-centre cytochrome c-551
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.1   0.00018      0.28     109     187 ..      31     113 ..       1     132 [. 0.65

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 0.00018
    PF10643.4 109 tGrtttldGkyirtvrelkaflegedfe..niedke..veekaeaekpaaaeevpvaeepagedlaaakklvdrkcnkchald 187
                  tGr+  l+     + +   af +   ++  + ed +  ++e+a a++ a+a++  +a ++a ++ +aa+k+v+ + +k  +++
  MMETSP1325-20131115|13520_1  31 TGRAEFLKVAGAVALAPTAAFADEAADKkkAEEDAKakAKEEADAKAKAEADAKEAARKSAEDAATAARKVVQDQGDKFKSMK 113
                  66666665555555666667764433330033333300344445555555555666677888889999999999998887765 PP

>> PF14138.1  Cytochrome c oxidase assembly protein COX16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   1.5    0.0016       2.5      12      55 ..      39      85 ..      36     132 .. 0.74

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.0016
    PF14138.1 12 vaGsfgLtkftqlryerrdekvkqleeeealkll...kkrrkvdlee 55
                 vaG+++L++ ++   e++d+k+ +++++++ k +   k + + d +e
  MMETSP1325-20131115|13520_1 39 VAGAVALAPTAAFADEAADKKKAEEDAKAKAKEEadaKAKAEADAKE 85
                 99****************99999988777777666663333334443 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   7.6   0.00084       1.3     167     236 ..      44     115 ..      33     135 .. 0.37

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00084
    PF04641.7 167 plnptke..elellkarl.eeekakkkkkkkkkkkkkaeakgekaeaeaksksskeesskagkkkekkklkkk 236
                   l pt    ++++ k+++ e++kak+k++ ++k+k +a+ak+++ +++a++++++ ++  + +  + k +kk+
  MMETSP1325-20131115|13520_1  44 ALAPTAAfaDEAADKKKAeEDAKAKAKEEADAKAKAEADAKEAA-RKSAEDAATAARKVVQDQGDKFKSMKKE 115
                  55555544222222333312233333333333333333222222.2222222222211111122222222222 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   8.5   0.00096       1.5      68     150 ..      52     138 ..      39     141 .. 0.56

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.00096
    PF08432.5  68 keeiekv.kkeyeekqkakkekkkkkkekdkekekkkdkkd..dksekekekeeeekaeelkkseeeaastldel.kprkyaLhkef 150
                  ++e ++  k+e ++k kak+e+++k k + ++ke   ++++  ++ + +  +++ +k +++kk+   a s +  +   ++y+L+ ++
  MMETSP1325-20131115|13520_1  52 ADEAADKkKAEEDAKAKAKEEADAKAKAEADAKEAARKSAEdaATAARKVVQDQGDKFKSMKKEDYIAGSAARRQaLMKQYNLSGDI 138
                  444444314455555555555555554444334433333221255666667777777777777777666666666678888887665 PP

>> PF05957.8  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   8.1    0.0018       2.7      15      72 ..      49     105 ..      40     108 .. 0.84

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0018
    PF05957.8  15 eellksaadeageeaeelReraeealerarerlrdaedavrerakeaaeaadeyVren 72 
                  ++++ +aad  ++  e+++++a+e++++  ++ +da++a+r+ a++aa aa+++V+++
  MMETSP1325-20131115|13520_1  49 AAFADEAAD-KKKAEEDAKAKAKEEADAKAKAEADAKEAARKSAEDAATAARKVVQDQ 105
                  556666666.5666689*********999999999********************986 PP

>> PF02724.9  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.9    0.0011       1.6     135     226 ..      56     134 ..      42     141 .. 0.41

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.0011
    PF02724.9 135 sdedsdseddeeeeessasekrksesdedeeddddeededeeqrkrsnesslakslrrrrrrereekeevlekyYaqgtsygesisllvYsL 226
                   d+++ +ed + + +++a+ k k+e d +e+++++ e               a ++r+  + +  + +++ +++Y +g+ + + + +  Y+L
  MMETSP1325-20131115|13520_1  56 ADKKKAEEDAKAKAKEEADAKAKAEADAKEAARKSAE-------------DAATAARKVVQDQGDKFKSMKKEDYIAGSAARRQALMKQYNL 134
                  2222222222222222222233333333333333333.............344444444444444444444444444444444444444444 PP

>> PF14153.1  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   5.8    0.0015       2.2      73     136 ..      55     114 ..      38     132 .. 0.47

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0015
    PF14153.1  73 aesedeqesseqeeiaqeveeeeeeeeekqeevekekeaekeeteleeekqkkerkKsfkeMnl 136
                  a+ ++++e+  ++++++e++     +++++ ++++++ + +e+++  ++k  + +  +fk M+ 
  MMETSP1325-20131115|13520_1  55 AADKKKAEEDAKAKAKEEADA----KAKAEADAKEAARKSAEDAATAARKVVQDQGDKFKSMKK 114
                  222222222222222222221....111111122222333444444444444444444555544 PP

>> PF03896.11  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   4.2    0.0023       3.4      35      85 ..      50      97 ..      34     124 .. 0.47

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0023
   PF03896.11 35 ltedeeaeddvvdedeedeaeveedekteaeeeedeeeagevkaspdadtt 85
                 +++de+a++++++ed + +a++e d k  a++e d +ea + k+  da t+
  MMETSP1325-20131115|13520_1 50 AFADEAADKKKAEEDAKAKAKEEADAK--AKAEADAKEA-ARKSAEDAATA 97
                 344555444444444444444444433..3333333333.33444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1720  (0.125805); expected 273.4 (0.02)
Passed bias filter:                      779  (0.0569778); expected 273.4 (0.02)
Passed Vit filter:                       144  (0.0105325); expected 13.7 (0.001)
Passed Fwd filter:                        14  (0.00102399); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.56u 0.46s 00:00:01.02 Elapsed: 00:00:00.56
# Mc/sec: 596.99
//
Query:       MMETSP1325-20131115|13521_1  [L=375]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-38  131.0   4.2    2.8e-19   69.1   0.1    4.2  4  PF12796.2  Ankyrin repeats (3 copies)
    8.3e-36  119.9  12.6    1.8e-09   36.7   0.0    7.4  8  PF00023.25 Ankyrin repeat
    7.6e-26   89.8   6.1    3.5e-08   33.6   0.3    6.1  7  PF13637.1  Ankyrin repeats (many copies)
    1.2e-24   85.6  14.2    1.4e-06   28.1   1.3    6.3  6  PF13857.1  Ankyrin repeats (many copies)
    6.4e-22   75.3  10.4    3.7e-05   23.4   0.0    6.7  7  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   0.3   4.8e-18   1.3e-14       9      84 ..      11      90 ..       8      95 .. 0.92
   2 !   20.5   0.1   1.4e-07   0.00039      28      75 ..      67     118 ..      62     121 .. 0.81
   3 ?    4.9   0.0     0.011        29       4      36 ..     131     189 ..     128     226 .. 0.64
   4 !   69.1   0.1     1e-22   2.8e-19       5      88 ..     258     345 ..     255     346 .. 0.95

  Alignments for each domain:
  == domain 1    score: 54.1 bits;  conditional E-value: 4.8e-18
    PF12796.2  9 nlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgad 84
                 +  ++ lL+ kgad++     g tpL  Aa+ g++ ++ +Ll+aga  +a+++ g+t+LhlA+++gh+ +++lL + +a+
  MMETSP1325-20131115|13521_1 11 DSAMITLLVRKGADLEArdheGCTPLLRAAQCGRVHCAAVLLSAGARYDARNAAGWTALHLAAKQGHVHALRLLAQWDAE 90
                 667999**********98877778**************************************************988776 PP

  == domain 2    score: 20.5 bits;  conditional E-value: 1.4e-07
    PF12796.2  28 tpLhlAaeagnleivklLleagadv....nakdkegntpLhlAvrnghlelv 75 
                  t+LhlAa++g++ +++lL +  a+     na++ +g+tp  +A + ++   v
  MMETSP1325-20131115|13521_1  67 TALHLAAKQGHVHALRLLAQWDAERgllrNARNCKGHTPYAVASMDNDPRRV 118
                  7999999999999999999966665556699999999999999998877766 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.011
    PF12796.2   4 AaengnlelvklLlekg.......advdlget...................pLhlAaea 36 
                  Aa  g+l+l+++ l++g        d + ++t                   pLh Aa+ 
  MMETSP1325-20131115|13521_1 131 AAAEGDLQLLQQTLAAGgvgtsssGDANSRRTrylwepaglesktaqhgmaPLHFAAWG 189
                  77777777777777766544433322221233556666666666677777777777754 PP

  == domain 4    score: 69.1 bits;  conditional E-value: 1e-22
    PF12796.2   5 aengnlelvklLlekgadvdl....getpLhlAaeagnleivklLleagadvnakdkegntpLhlAvrnghlelvklLlekgadvnlr 88 
                  a+ +++ +v++Lle++a v++      tpL++Aa++g le++++Ll +ga  +++d +gntpLh+A  +++ ++v lLl++gad+ ++
  MMETSP1325-20131115|13521_1 258 ARAKQVRAVQFLLESNAYVEVldrrCATPLMIAARRGGLEVAEMLLRHGAIKDSTDIYGNTPLHYAYAFKQMDVVALLLKHGADPLAE 345
                  678899***********99999899999********************************************************9876 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0003      0.82      15      32 ..      12      29 ..       5      30 .. 0.89
   2 !   22.9   0.1   1.6e-08   4.4e-05       2      32 ..      32      62 ..      31      63 .. 0.95
   3 !   19.2   0.1   2.4e-07   0.00065       2      23 ..      65      86 ..      64     100 .. 0.85
   4 ?   -2.9   0.0       2.5   6.8e+03       2      13 ..     102     113 ..     101     118 .. 0.78
   5 ?    2.8   0.0     0.037     1e+02       1      11 [.     178     188 ..     178     203 .. 0.89
   6 ?    0.7   0.0      0.17   4.7e+02      13      31 ..     261     279 ..     239     281 .. 0.77
   7 !   29.7   0.0   1.1e-10   3.1e-07       4      29 ..     285     310 ..     283     314 .. 0.90
   8 !   36.7   0.0   6.8e-13   1.8e-09       1      32 [.     315     346 ..     315     347 .. 0.95

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.0003
                 HHHHHHHHHTTSSTTHBH CS
   PF00023.25 15 levvklLlsqGAdlnaqd 32
                   +++lL+ +GAdl a+d
  MMETSP1325-20131115|13521_1 12 SAMITLLVRKGADLEARD 29
                 569**************9 PP

  == domain 2    score: 22.9 bits;  conditional E-value: 1.6e-08
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlnaqd 32
                 G+TPL  Aa++g++ ++  Lls+GA  +a++
  MMETSP1325-20131115|13521_1 32 GCTPLLRAAQCGRVHCAAVLLSAGARYDARN 62
                 9************************999988 PP

  == domain 3    score: 19.2 bits;  conditional E-value: 2.4e-07
                 SCBHHHHHHHTTHHHHHHHHHH CS
   PF00023.25  2 GfTPLHlAalrgnlevvklLls 23
                 G+T+LHlAa+ g++  ++lL +
  MMETSP1325-20131115|13521_1 65 GWTALHLAAKQGHVHALRLLAQ 86
                 9*****************9976 PP

  == domain 4    score: -2.9 bits;  conditional E-value: 2.5
                  SCBHHHHHHHTT CS
   PF00023.25   2 GfTPLHlAalrg 13 
                  G TP  +A++ +
  MMETSP1325-20131115|13521_1 102 GHTPYAVASMDN 113
                  899988888766 PP

  == domain 5    score: 2.8 bits;  conditional E-value: 0.037
                  TSCBHHHHHHH CS
   PF00023.25   1 dGfTPLHlAal 11 
                  +G+ PLH Aa 
  MMETSP1325-20131115|13521_1 178 HGMAPLHFAAW 188
                  6999*****96 PP

  == domain 6    score: 0.7 bits;  conditional E-value: 0.17
                  THHHHHHHHHHTTSSTTHB CS
   PF00023.25  13 gnlevvklLlsqGAdlnaq 31 
                   +++ v++Ll+ +A + + 
  MMETSP1325-20131115|13521_1 261 KQVRAVQFLLESNAYVEVL 279
                  48889******99987665 PP

  == domain 7    score: 29.7 bits;  conditional E-value: 1.1e-10
                  BHHHHHHHTTHHHHHHHHHHTTSSTT CS
   PF00023.25   4 TPLHlAalrgnlevvklLlsqGAdln 29 
                  TPL++Aa+rg+lev+++Ll +GA  +
  MMETSP1325-20131115|13521_1 285 TPLMIAARRGGLEVAEMLLRHGAIKD 310
                  **********************9655 PP

  == domain 8    score: 36.7 bits;  conditional E-value: 6.8e-13
                  TSCBHHHHHHHTTHHHHHHHHHHTTSSTTHBH CS
   PF00023.25   1 dGfTPLHlAalrgnlevvklLlsqGAdlnaqd 32 
                  +G+TPLH+A    +++vv lLl++GAd+ a +
  MMETSP1325-20131115|13521_1 315 YGNTPLHYAYAFKQMDVVALLLKHGADPLAEN 346
                  6***************************9987 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   2.3e-07   0.00062      16      54 .]      14      52 ..       4      52 .. 0.89
   2 !   33.6   0.3   1.3e-11   3.5e-08      12      53 ..      43      84 ..      43      85 .. 0.97
   3 ?   -1.3   0.0       1.2   3.2e+03       3      21 ..     126     144 ..     124     149 .. 0.77
   4 ?   -0.0   0.0      0.46   1.3e+03      34      43 ..     179     188 ..     163     193 .. 0.86
   5 !   19.1   0.0   4.6e-07    0.0013       8      54 .]     257     303 ..     253     303 .. 0.91
   6 !   14.8   0.0   9.7e-06     0.027      29      54 .]     311     336 ..     308     336 .. 0.92
   7 !   20.0   0.0   2.4e-07   0.00064       1      36 [.     316     351 ..     316     358 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.1 bits;  conditional E-value: 2.3e-07
    PF13637.1 16 lvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                 ++ lL+ kg+d+ ++d +G t+L +Aa+ g+++++  Ll
  MMETSP1325-20131115|13521_1 14 MITLLVRKGADLEARDHEGCTPLLRAAQCGRVHCAAVLL 52
                 57788889***************************9997 PP

  == domain 2    score: 33.6 bits;  conditional E-value: 1.3e-11
    PF13637.1 12 grlelvklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                 gr+ +++ Ll+ g+  +++++ G+taLh+Aa+ g++++l+lL
  MMETSP1325-20131115|13521_1 43 GRVHCAAVLLSAGARYDARNAAGWTALHLAAKQGHVHALRLL 84
                 78999***********************************99 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 1.2
    PF13637.1   3 taLhyaaisgrlelvklLl 21 
                  +++  aa+ g+l+l++  l
  MMETSP1325-20131115|13521_1 126 RTVWEAAAEGDLQLLQQTL 144
                  5678899999999998666 PP

  == domain 4    score: -0.0 bits;  conditional E-value: 0.46
    PF13637.1  34 GntaLhiAal 43 
                  G+ +Lh+Aa+
  MMETSP1325-20131115|13521_1 179 GMAPLHFAAW 188
                  7779999987 PP

  == domain 5    score: 19.1 bits;  conditional E-value: 4.6e-07
    PF13637.1   8 aaisgrlelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54 
                   a++  +++v++Lle+++ +  +d+++ t+L iAa+rg +e++++Ll
  MMETSP1325-20131115|13521_1 257 KARAKQVRAVQFLLESNAYVEVLDRRCATPLMIAARRGGLEVAEMLL 303
                  456999**********998888899********************97 PP

  == domain 6    score: 14.8 bits;  conditional E-value: 9.7e-06
    PF13637.1  29 rtdesGntaLhiAalrgnieilklLl 54 
                   td++Gnt+Lh+A  + +++++ lLl
  MMETSP1325-20131115|13521_1 311 STDIYGNTPLHYAYAFKQMDVVALLL 336
                  5799*******************997 PP

  == domain 7    score: 20.0 bits;  conditional E-value: 2.4e-07
    PF13637.1   1 gltaLhyaaisgrlelvklLlekgidinrtdesGnt 36 
                  g+t+Lhya ++  +++v+lLl++g+d+ + ++ +++
  MMETSP1325-20131115|13521_1 316 GNTPLHYAYAFKQMDVVALLLKHGADPLAENRACRS 351
                  68************************9987776665 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   1.3   5.2e-10   1.4e-06       1      56 []      18      72 ..      17      72 .. 0.94
   2 !   27.2   1.6   1.1e-09   2.9e-06       1      56 []      51     109 ..      51     109 .. 0.93
   3 !    5.0   0.0    0.0099        27      14      27 ..     177     190 ..     174     195 .. 0.82
   4 ?   -0.2   0.0      0.45   1.2e+03      24      41 ..     258     275 ..     255     285 .. 0.72
   5 !   17.3   0.0   1.4e-06    0.0038      14      40 ..     284     307 ..     273     308 .. 0.83
   6 !   25.7   0.0   3.2e-09   8.7e-06       9      52 ..     309     352 ..     304     355 .. 0.91

  Alignments for each domain:
  == domain 1    score: 28.1 bits;  conditional E-value: 5.2e-10
    PF13857.1  1 LlehgpadvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltaldlA 56
                 L+++g ad+ a+d +g tpL  Aa +g+++++  Ll +ga +++r++ g+tal+lA
  MMETSP1325-20131115|13521_1 18 LVRKG-ADLEARDHEGCTPLLRAAQCGRVHCAAVLLSAGARYDARNAAGWTALHLA 72
                 67778.88888888899*************************************99 PP

  == domain 2    score: 27.2 bits;  conditional E-value: 1.1e-09
    PF13857.1   1 LlehgpadvnatdeggntpLhlAakggalevvrlLl....apgadlnlrdsdgltaldlA 56 
                  Ll++g a+ +a++ +g t+LhlAak+g+++++rlL     ++g   n+r+  g t++ +A
  MMETSP1325-20131115|13521_1  51 LLSAG-ARYDARNAAGWTALHLAAKQGHVHALRLLAqwdaERGLLRNARNCKGHTPYAVA 109
                  78888.88888999999***************************************9776 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.0099
    PF13857.1  14 eggntpLhlAakgg 27 
                  ++g+ pLh+Aa+g 
  MMETSP1325-20131115|13521_1 177 QHGMAPLHFAAWGP 190
                  68999*******85 PP

  == domain 4    score: -0.2 bits;  conditional E-value: 0.45
    PF13857.1  24 akggalevvrlLlapgad 41 
                  a++ ++ +v++Ll+ +a 
  MMETSP1325-20131115|13521_1 258 ARAKQVRAVQFLLESNAY 275
                  5688999******55544 PP

  == domain 5    score: 17.3 bits;  conditional E-value: 1.4e-06
    PF13857.1  14 eggntpLhlAakggalevvrlLlapga 40 
                      tpL++Aa++g lev+++Ll++ga
  MMETSP1325-20131115|13521_1 284 A---TPLMIAARRGGLEVAEMLLRHGA 307
                  2...*******************8875 PP

  == domain 6    score: 25.7 bits;  conditional E-value: 3.2e-09
    PF13857.1   9 vnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdglta 52 
                   ++td +gntpLh+A    + +vv lLl++gad+ + +  ++++
  MMETSP1325-20131115|13521_1 309 KDSTDIYGNTPLHYAYAFKQMDVVALLLKHGADPLAENRACRSP 352
                  5789**********************************999987 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.43   1.2e+03      16      29 ..      13      26 ..       9      27 .. 0.85
   2 !   13.7   0.0   1.8e-05      0.05       2      26 ..      32      56 ..      31      60 .. 0.91
   3 !   16.8   0.1   1.9e-06    0.0051       2      24 ..      65      87 ..      64      90 .. 0.89
   4 ?   -1.0   0.1         1   2.8e+03       2      10 ..     179     187 ..     178     188 .. 0.82
   5 ?    2.2   0.0     0.093   2.5e+02      10      26 ..     258     274 ..     254     278 .. 0.79
   6 !   18.6   0.0   4.7e-07    0.0013       4      26 ..     285     307 ..     282     311 .. 0.94
   7 !   23.4   0.0   1.4e-08   3.7e-05       1      29 [.     315     343 ..     315     344 .. 0.95

  Alignments for each domain:
  == domain 1    score: 0.2 bits;  conditional E-value: 0.43
    PF13606.1 16 elveaLlengadin 29
                 +++ +L+++gad+ 
  MMETSP1325-20131115|13521_1 13 AMITLLVRKGADLE 26
                 58889*******86 PP

  == domain 2    score: 13.7 bits;  conditional E-value: 1.8e-05
    PF13606.1  2 GnTpLhlAasngrielveaLlenga 26
                 G+TpL  Aa++gr+  +  Ll++ga
  MMETSP1325-20131115|13521_1 32 GCTPLLRAAQCGRVHCAAVLLSAGA 56
                 9*********************998 PP

  == domain 3    score: 16.8 bits;  conditional E-value: 1.9e-06
    PF13606.1  2 GnTpLhlAasngrielveaLlen 24
                 G+T+LhlAa++g++ ++++L + 
  MMETSP1325-20131115|13521_1 65 GWTALHLAAKQGHVHALRLLAQW 87
                 9****************999765 PP

  == domain 4    score: -1.0 bits;  conditional E-value: 1
    PF13606.1   2 GnTpLhlAa 10 
                  G  pLh Aa
  MMETSP1325-20131115|13521_1 179 GMAPLHFAA 187
                  6779****8 PP

  == domain 5    score: 2.2 bits;  conditional E-value: 0.093
    PF13606.1  10 asngrielveaLlenga 26 
                  a+ +++ +v++Lle+ a
  MMETSP1325-20131115|13521_1 258 ARAKQVRAVQFLLESNA 274
                  55678899******987 PP

  == domain 6    score: 18.6 bits;  conditional E-value: 4.7e-07
    PF13606.1   4 TpLhlAasngrielveaLlenga 26 
                  TpL++Aa++g +e++e Ll++ga
  MMETSP1325-20131115|13521_1 285 TPLMIAARRGGLEVAEMLLRHGA 307
                  9*********************8 PP

  == domain 7    score: 23.4 bits;  conditional E-value: 1.4e-08
    PF13606.1   1 nGnTpLhlAasngrielveaLlengadin 29 
                  +GnTpLh+A  ++++++v +Ll++gad+ 
  MMETSP1325-20131115|13521_1 315 YGNTPLHYAYAFKQMDVVALLLKHGADPL 343
                  8**************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       499  (0.036498); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.64
# Mc/sec: 1404.12
//
Query:       MMETSP1325-20131115|13530_1  [L=329]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-72  242.1   0.2    9.5e-72  241.6   0.1    1.2  1  PF00231.14 ATP synthase


Domain annotation for each model (and alignments):
>> PF00231.14  ATP synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.6   0.1     7e-76   9.5e-72       1     290 []      50     327 ..      50     327 .. 0.94

  Alignments for each domain:
  == domain 1    score: 241.6 bits;  conditional E-value: 7e-76
                  --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------....-EEEEEE---------HHHHHHHHHHHHCTSSTTS....EEEEE--HHHHHHHT.STTTEEEEEE----S--HHHHHHHHHHHHHTS-----SEEEEEEEEESSSSEEEEEEEEE--......HHHHHTSTT----B--..TSSSHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH------ CS
   PF00231.14   1 aslkeikrriksvkntqkItkAMkmvaasklrkaqerveaarpYaeklekvlselaskseelehplleqreevkkvllivitsDrGLcGgfNsnvikaaeellkelkaegkevkllvvGkkgrdflkr.rkkevvaevtgvsdkptfeeaqeiaeelielfekgevdevelvynkfknalsqeptveqllpiekeakeeeeeeeesesdyefep.daeevleellpkyvesqlyrallesaasEhaaRmtAMksAtdNakelikkLtlqynraRQaaITqEliEIvsGaeal 290
                  a+ k+i  ri s++n++kIt++Mkmv+++k++   +r+ea+ p++e  +++ +           + l  ++ +kk+l+++++sD+GLcGg+Ns + ++++++ ++l+++gke++++v G+kgr++l+r  +++++++ t+     +f+ +  +a+e+ e     e+d v++++nkf++a+ ++++v++l++       + e ++e   +yefep +++e+l++l +++++sqly+++le aasE+++R +AM++A++Na+el++ Ltlqyn+aRQ+ IT+EliEI+sGa+al
  MMETSP1325-20131115|13530_1  50 ATEKQIAMRIVSTNNLKKITSSMKMVSSAKMQADLKRLEAVAPFNEFAKTLCGPATPC------DDLDVSDWPKKNLIVAVSSDKGLCGGVNSFISRNIKKIKSSLESDGKELSVIVWGEKGRSQLRRvCGDNILSANTDAAYPASFASVGCVASEVAEYA--PEYDGVHIIFNKFESAIAYTTSVQSLIS------LNGEGDAEPMMSYEFEPdTKSEILQDLGEFMIASQLYYSVLEGAASEQSSRTQAMENASKNAGELVEALTLQYNKARQSRITTELIEIISGASAL 327
                  56799***************************************99999999888444......445666689*******************************************************89999***********************99887..56**************************......46678899999******55779***********************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       541  (0.0395699); expected 273.4 (0.02)
Passed bias filter:                      374  (0.0273552); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 1516.16
//
Query:       MMETSP1325-20131115|13531_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.6e-13   48.1   2.0    7.7e-13   47.9   1.4    1.0  1  PF08147.7 DBP10CT (NUC160) domain


Domain annotation for each model (and alignments):
>> PF08147.7  DBP10CT (NUC160) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   1.4   5.6e-17   7.7e-13       1      46 [.       6      55 ..       6      56 .. 0.94

  Alignments for each domain:
  == domain 1    score: 47.9 bits;  conditional E-value: 5.6e-17
    PF08147.7  1 DLvnDekakeskqkklmrWDkkkkkyVsran....gskgdkkkIrgEsGq 46
                 D++ De++++++qk+l++WDk+++kyV+r+     ++++++kk r+EsG+
  MMETSP1325-20131115|13531_1  6 DITPDEGRDMQRQKTLYQWDKRHNKYVKRTLgemqDNNRGAKKLRTESGE 55
                 8999************************988889999999*********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       426  (0.0311586); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.64
# Mc/sec: 213.43
//
Query:       MMETSP1325-20131115|13537_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-05   23.5   1.1    1.6e-05   23.2   0.7    1.0  1  PF06011.7  Transient receptor potential (TRP) ion channel
  ------ inclusion threshold ------
       0.01   16.1   0.5      0.015   15.6   0.3    1.2  1  PF06749.7  Protein of unknown function (DUF1218)
      0.032   12.4   0.0      0.034   12.3   0.0    1.0  1  PF03547.13 Membrane transport protein
      0.036   14.2   0.5      0.049   13.8   0.3    1.4  1  PF09799.4  Predicted membrane protein
      0.037   13.9   1.1       0.06   13.2   0.7    1.4  1  PF11239.3  Protein of unknown function (DUF3040)
      0.045   13.8   0.4      0.066   13.2   0.2    1.3  1  PF13908.1  Wnt and FGF inhibitory regulator
      0.071   12.9   0.7      0.098   12.4   0.5    1.2  1  PF14126.1  Domain of unknown function (DUF4293)
      0.076   12.3   0.1        0.1   11.9   0.1    1.2  1  PF08999.5  Surfactant protein C, N terminal propeptide
        0.1   12.2   1.9       0.12   12.0   1.3    1.1  1  PF01284.18 Membrane-associating domain
       0.11   11.7   0.9       0.16   11.2   0.6    1.3  1  PF06143.6  Baculovirus 11 kDa family
       0.11   12.1   0.2       0.14   11.8   0.1    1.1  1  PF11292.3  Protein of unknown function (DUF3093)
       0.12   12.5   0.8       0.16   12.1   0.5    1.4  1  PF02588.10 Uncharacterized BCR, YitT family COG1284


Domain annotation for each model (and alignments):
>> PF06011.7  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.7   1.4e-08   1.6e-05     479     552 ..       6      79 ..       3      81 .. 0.92

  Alignments for each domain:
  == domain 1    score: 23.2 bits;  conditional E-value: 1.4e-08
    PF06011.7 479 llylilllwirPymdkrsnalniiisvvrlltallslaFipelglseivktvvGvvilvihaivalvllillav 552
                  +++l++   ++Py+d+ +n+l ++ +  +++t +   a++ +   +e ++  +G+ ++v++++v+++ l+l +v
  MMETSP1325-20131115|13537_1   6 AVSLAVFQELQPYHDPATNTLAVAAQWQTFITYFGAFALSSSEFETERTRLTIGICLFVVNVVVLVIALVLGLV 79 
                  6778888889******************************99999999********************998665 PP

>> PF06749.7  Protein of unknown function (DUF1218)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.3   1.3e-05     0.015      13      65 ..      35      84 ..      22      91 .. 0.70

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.3e-05
    PF06749.7 13 vnvasgClccgkalspkskrrravavvlfvlswvlfviavalLlagavrnaeh 65
                 + ++ g +  ++++++ + +r ++ ++lfv+  v++via +    g v+n+e+
  MMETSP1325-20131115|13537_1 35 FITYFGAFALSSSEFETERTRLTIGICLFVVNVVVLVIALV---LGLVKNRER 84
                 334446688899999999999999******99998888865...566666665 PP

>> PF03547.13  Membrane transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     3e-05     0.034      55     121 ..      17      82 ..       6      91 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3e-05
   PF03547.13  55 pykmilrfilapvlvvlivlvllllgflvskilkgslew.ritlfslstlpNtlvlgipllkamygek 121
                  py +     la+  ++ ++++++ +++l s+  + + e  r t+ ++  + N+ vl i+l+ ++ +++
  MMETSP1325-20131115|13537_1  17 PYHDPATNTLAVAAQWQTFITYFGAFALSSS--EFETERtRLTIGICLFVVNVVVLVIALVLGLVKNR 82 
                  56666677788999999********999999..555555055566666779*************9984 PP

>> PF09799.4  Predicted membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.3   4.3e-05     0.049      14      71 ..      35      92 ..      23      93 .] 0.91

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.3e-05
    PF09799.4 14 fvsellllilKgillklpsaylvlevvllvllllvevvRLylGyrGNlaekvpalalf 71
                 f+++++ + l ++     ++ l++ ++l v+ ++v v+ L+lG + N+  ++ ++++f
  MMETSP1325-20131115|13537_1 35 FITYFGAFALSSSEFETERTRLTIGICLFVVNVVVLVIALVLGLVKNREREEKEATMF 92
                 78888899999999999999*****************************999999987 PP

>> PF11239.3  Protein of unknown function (DUF3040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.7   5.3e-05      0.06      35      64 ..      49      78 ..      34      80 .. 0.78

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.3e-05
    PF11239.3 35 rraserrivlgvllavlGlvllvaGvvlql 64
                    ++ r+ +g++l+v+ +v+lv++ vl l
  MMETSP1325-20131115|13537_1 49 FETERTRLTIGICLFVVNVVVLVIALVLGL 78
                 344556679****************99876 PP

>> PF13908.1  Wnt and FGF inhibitory regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   5.8e-05     0.066      76     114 ..      52      86 ..      32      92 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.8e-05
    PF13908.1  76 lkvvlivsiilivvfivvliviftcskcvlekavrrqrp 114
                    + l ++i l+vv +vvl+++++   ++l k  r++++
  MMETSP1325-20131115|13537_1  52 ERTRLTIGICLFVVNVVVLVIALV---LGLVKN-REREE 86 
                  36899****************998...888883.33333 PP

>> PF14126.1  Domain of unknown function (DUF4293)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.5   8.6e-05     0.098      94     133 ..      35      74 ..      21      76 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8.6e-05
    PF14126.1  94 llglfayfllnlsgeleatsekgiglflplvaivllvLAn 133
                  ++ +f +f+l++s+  ++  +++ig++l++v++v+lv+A 
  MMETSP1325-20131115|13537_1  35 FITYFGAFALSSSEFETERTRLTIGICLFVVNVVVLVIAL 74 
                  45555566666555444899******************95 PP

>> PF08999.5  Surfactant protein C, N terminal propeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   8.9e-05       0.1      34      63 ..      54      83 ..      41      91 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 8.9e-05
    PF08999.5 34 krllivvvvvvlvvvvivgallmglhmsqk 63
                  rl i + + v+ vvv+v al++gl   + 
  MMETSP1325-20131115|13537_1 54 TRLTIGICLFVVNVVVLVIALVLGLVKNRE 83
                 588888888899999999999999976655 PP

>> PF01284.18  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.3   0.00011      0.12      36      93 ..      18      76 ..       2      80 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00011
   PF01284.18 36 gspssalnfavfvavfsflyalallvlylfk.nkyftsilwplidlivdalaallwlva 93
                 ++ +++ ++av++ + +f++ +++++l+ ++  + +t+  + + +++v++++ +  lv 
  MMETSP1325-20131115|13537_1 18 YHDPATNTLAVAAQWQTFITYFGAFALSSSEfETERTRLTIGICLFVVNVVVLVIALVL 76
                 4457888888888888888899999998888********************99988875 PP

>> PF06143.6  Baculovirus 11 kDa family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.6   0.00014      0.16      40      70 ..      60      89 ..      54      93 .] 0.72

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00014
    PF06143.6 40 icglvvfvvivlfilLlvvilknaeaeeaek 70
                 ic l+v+ v+vl i+L++ ++kn e ee+e 
  MMETSP1325-20131115|13537_1 60 IC-LFVVNVVVLVIALVLGLVKNREREEKEA 89
                 45.5555567788999999999888887764 PP

>> PF11292.3  Protein of unknown function (DUF3093)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00013      0.14       9      58 ..      30      79 ..      25      87 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00013
    PF11292.3  9 vplwlwlvgalvvaliaievvlgvesllagvpaavllavavvvllvlsrt 58
                 + ++ ++  +++ al + e+  ++++l+ g+ + v+ +v++v++lvl+ +
  MMETSP1325-20131115|13537_1 30 AQWQTFITYFGAFALSSSEFETERTRLTIGICLFVVNVVVLVIALVLGLV 79
                 578999999*99******************99999999999999998755 PP

>> PF02588.10  Uncharacterized BCR, YitT family COG1284
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.5   0.00014      0.16      39      63 ..      53      77 ..      25      92 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 0.00014
   PF02588.10 39 kkgisigsillliniilliislllf 63
                  +++ ig+ l+++n+++l+i+l+l 
  MMETSP1325-20131115|13537_1 53 RTRLTIGICLFVVNVVVLVIALVLG 77
                 45699****************9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       875  (0.0639994); expected 273.4 (0.02)
Passed bias filter:                      719  (0.0525892); expected 273.4 (0.02)
Passed Vit filter:                        91  (0.00665594); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.46u 0.41s 00:00:00.87 Elapsed: 00:00:00.56
# Mc/sec: 397.97
//
Query:       MMETSP1325-20131115|13541_1  [L=359]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-57  193.5   0.0    4.2e-57  193.1   0.0    1.1  1  PF00069.20 Protein kinase domain
      3e-31  108.3   0.0    4.2e-31  107.8   0.0    1.1  1  PF07714.12 Protein tyrosine kinase
    3.7e-06   26.9   2.9    7.4e-06   26.0   2.0    1.4  1  PF00433.19 Protein kinase C terminal domain
  ------ inclusion threshold ------
      0.052   12.4   0.0      0.086   11.7   0.0    1.3  1  PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.1   0.0   1.2e-60   4.2e-57      44     252 ..      10     213 ..       3     225 .. 0.93

  Alignments for each domain:
  == domain 1    score: 193.1 bits;  conditional E-value: 1.2e-60
                  HHHHHHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE...CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHHHHHHHHHHHHT-SSGGGS--HH CS
   PF00069.20  44 tavrElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl...eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepkssskseelkdlikkllekdpakRltae 252
                  +++ E +il+++ Hp++v +  +f+++d+ly+vley+ gg+lf++lk+++k+see +k +a +i  +l  lHs++ii+rDLKpeNiLld +g+l+++DFGl+k        ++ ++t++gt+eY+APE+l+ +k+++k+vD+Ws+G +lyel++g +pf+++   +++++++ki + +l+++++ s    ++ k +++ ll+++ ++Rl  +
  MMETSP1325-20131115|13541_1  10 HTATERQILQTIVHPFLVGIKFAFQTDDKLYMVLEYMGGGELFHWLKAKRKFSEEAAKLFAAEITLALGCLHSHNIIYRDLKPENILLDMDGHLRLTDFGLSKDGiesADGEQGTKTFCGTPEYLAPEILE-NKGHGKAVDWWSFGTLLYELMCGLPPFYDT---NMQRMYHKIASSPLRFPSYLS----ANSKTILQGLLQRNVRNRLGST 213
                  3445***************************************************************************************************988876777899****************.*****************************9...*****************9977....899***************9844 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.8   0.0   1.2e-34   4.2e-31      44     249 ..       7     209 ..       3     217 .. 0.92

  Alignments for each domain:
  == domain 1    score: 107.8 bits;  conditional E-value: 1.2e-34
                  HHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-E.ECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTTT-GTTTTSHHHHHHHHHHTT-BS---TTSBHHHHHHHHHHT-SSGGGS CS
   PF07714.12  44 ekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeak.lpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglsneevlellkegkrlekpekcpeelyelmkqCweeepeeR 249
                  + ++  +e +i++++ hp +v +  ++ ++++l++v+ey+ gG+L + L++k  +k++ +    fa++i  ++  L+s++++ rdL   N+Ll+ + + +++DfGL++d  ++ + ++ +++     +++apE+l++k   ++ D WsfG+ll+E+++ g  p+ + + +++++++ +   l+ p++ +++ +++++  ++++ ++R
  MMETSP1325-20131115|13541_1   7 QLAHTATERQILQTIVHPFLVGIKFAFQTDDKLYMVLEYMGGGELFHWLKAK--RKFSEEAAKLFAAEITLALGCLHSHNIIYRDLKPENILLDMDGHLRLTDFGLSKDGIESADGEQGTKTFcGTPEYLAPEILENKGHGKAVDWWSFGTLLYELMC-GLPPFYDTNMQRMYHKIAS-SPLRFPSYLSANSKTILQGLLQRNVRNR 209
                  566778899******************************************8..99*****************************************************9777777777777646789*****************************9.88*************9975.5789999999999999999998888888 PP

>> PF00433.19  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   2.0   2.2e-09   7.4e-06      10      45 ..     259     293 ..     256     296 .. 0.78

  Alignments for each domain:
  == domain 1    score: 26.0 bits;  conditional E-value: 2.2e-09
                  CCTCCCCTS-SS---..--HHHHTT--GGGGTT--E CS
   PF00433.19  10 NFDpeFteesvtdtpigadsspltsskqenFrGFtY 45 
                  +FD+eFt+e+ +d+    +   +t+++ +nF GFtY
  MMETSP1325-20131115|13541_1 259 HFDKEFTNEPALDSV-VTSTLSSTQQDKSNFAGFTY 293
                  8*************9.4444445555555******* PP

>> PF06293.9  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.5e-05     0.086     105     165 ..      51     108 ..      41     122 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.5e-05
    PF06293.9 105 LaeilakwaelaeelkralleavGrliakmhragvnHtdlnahnilldeeeekakvwliDl 165
                  L  +l+  ++++ee  +    ++  +   +h+ ++ ++dl + nilld ++   ++ l D+
  MMETSP1325-20131115|13541_1  51 LFHWLKAKRKFSEEAAKLFAAEITLALGCLHSHNIIYRDLKPENILLDMDG---HLRLTDF 108
                  7789999889999*99*********************************99...8888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      254  (0.0185781); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.39s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 1623.19
//
Query:       MMETSP1325-20131115|13544_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   11.8   0.0       0.23   10.8   0.0    1.5  1  PF01842.20 ACT domain


Domain annotation for each model (and alignments):
>> PF01842.20  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   1.7e-05      0.23      21      60 ..      93     134 ..      92     136 .. 0.93

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.7e-05
                  HHHTT--ECEEEEEEESS...EEEEEEEEEECHHHHHHHHHH CS
   PF01842.20  21 LadrgiNidsisqstsgdk..agivfvtvvvdeedleaalea 60 
                  +ad +i++  i+q+t+ d+  a+++   v  d  d+ +a++a
  MMETSP1325-20131115|13544_1  93 CADEQISVMGIRQATDPDPhmAHFAGSQVLRDNLDPRQAMKA 134
                  79*******************999999999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.36s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 858.69
//
Query:       MMETSP1325-20131115|13554_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   13.4   0.7      0.058   13.4   0.5    1.1  1  PF13747.1 Domain of unknown function (DUF4164)


Domain annotation for each model (and alignments):
>> PF13747.1  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5   4.2e-06     0.058      30      57 ..      23      50 ..       6      51 .] 0.78

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 4.2e-06
    PF13747.1 30 aerkrdeleaeiqaldadrsrLaqeLdk 57
                 + ++ + ++ae+++++++r+rL++ L +
  MMETSP1325-20131115|13554_1 23 QSDSVATIAAELKQMTEERERLDRCLAE 50
                 34455999***************98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       403  (0.0294763); expected 273.4 (0.02)
Passed bias filter:                      330  (0.0241369); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 244.43
//
Query:       MMETSP1325-20131115|13555_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      301  (0.0220158); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|13550_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-30  102.1   1.8    1.2e-29  101.6   1.3    1.2  1  PF00957.16 Synaptobrevin
      6e-16   57.6   0.0    1.2e-15   56.6   0.0    1.6  1  PF13774.1  Regulated-SNARE-like domain
  ------ inclusion threshold ------
      0.047   13.1   0.2      0.073   12.4   0.1    1.2  1  PF00517.12 Retroviral envelope protein
        4.5    6.9   5.9         22    4.6   4.1    2.1  1  PF03908.8  Sec20


Domain annotation for each model (and alignments):
>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.6   1.3   3.5e-33   1.2e-29       5      89 .]     143     227 ..     140     227 .. 0.98

  Alignments for each domain:
  == domain 1    score: 101.6 bits;  conditional E-value: 3.5e-33
   PF00957.16   5 lskikaevdevkdimkeNidkvlergekldeLvdkteaLqesaqqFkkqarklkrkmwwknmklliililvvlililiiiivicg 89 
                  ++k+ +++++vk++m +Ni+ +lergekl++Lvdkt++Lq++a+qF+k++++l+r+mw+k++k+++++++vv++l +++ +vicg
  MMETSP1325-20131115|13550_1 143 VQKVSDKLEKVKGVMVQNIEHILERGEKLELLVDKTDQLQSQAFQFQKTSQQLQRAMWLKKVKIYAAITFVVILLSYVLSVVICG 227
                  7899*******************************************************************************97 PP

>> PF13774.1  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.0   3.6e-19   1.2e-15       2      77 ..      36     113 ..      35     120 .. 0.87

  Alignments for each domain:
  == domain 1    score: 56.6 bits;  conditional E-value: 3.6e-19
    PF13774.1   2 akqilkklppnspqklsyesgnyvfhylvedglvylvvadk...syprrlafafLeeikreFlstyggsqiesaspyaf 77 
                  ++ +l k++ +++ + sy +++y+fhy v +g++yl+++++   s + rl++afL++ik++Fl tyg +++++a+++ +
  MMETSP1325-20131115|13550_1  36 TRLLLGKINMSKEGRVSYLYDQYMFHYNVCEGIIYLCMTSAeegSDQVRLPYAFLDDIKTQFLDTYG-DRAKTAIAFEM 113
                  7899*****98899*************************993334468******************7.78999998877 PP

>> PF00517.12  Retroviral envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   2.2e-05     0.073     104     179 ..     144     226 ..     124     232 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 2.2e-05
   PF00517.12 104 qewedqvsqleqkileiieeaqnqqek...nkqelqklds.waqlan...wfdwtsWikiikigililliiivlrilvkvlrn 179
                  q+  d++++ +  + + ie + +  ek    ++++++l+s   q+ +    ++   W+k +ki + i  ++i+l  ++ v+ +
  MMETSP1325-20131115|13550_1 144 QKVSDKLEKVKGVMVQNIEHILERGEKlelLVDKTDQLQSqAFQFQKtsqQLQRAMWLKKVKIYAAITFVVILLSYVLSVVIC 226
                  56667777777777777777766655511156778888886334444666889999*****************9999988876 PP

>> PF03908.8  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   4.1    0.0066        22      18      89 ..     158     222 ..     142     225 .. 0.68

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0066
    PF03908.8  18 sqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglflacvvyvvk 89 
                  +q       n+e++ +  ++le l ++  q+++   + +k  ++l+r+    k++++ a+ + ++  +yv++
  MMETSP1325-20131115|13550_1 158 VQ-------NIEHILERGEKLELLVDKTDQLQSQAFQFQKTSQQLQRAMWLKKVKIYAAITFVVILLSYVLS 222
                  44.......455555555666666666666665555556666778888889999999999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       935  (0.0683879); expected 273.4 (0.02)
Passed bias filter:                      674  (0.0492978); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.41s 00:00:01.03 Elapsed: 00:00:00.51
# Mc/sec: 1137.09
//
Query:       MMETSP1325-20131115|13556_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      133  (0.00972791); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 634.04
//
Query:       MMETSP1325-20131115|13563_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 414.37
//
Query:       MMETSP1325-20131115|13565_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-08   32.2   1.9    0.00077   18.4   0.1    2.4  2  PF00036.27 EF hand
    1.3e-07   30.7   0.1     0.0091   15.7   0.0    2.3  2  PF13405.1  EF-hand domain
    5.3e-07   28.5   0.5     0.0036   16.4   0.0    2.4  2  PF13202.1  EF hand
    9.2e-07   28.8   0.3      2e-06   27.6   0.2    1.6  1  PF13499.1  EF-hand domain pair
     0.0031   16.9   3.6     0.0095   15.4   1.8    2.3  2  PF13833.1  EF-hand domain pair
      0.007   16.2   3.4      0.012   15.5   0.5    2.4  2  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
  ------ inclusion threshold ------
       0.06   12.5   1.7      0.084   12.0   1.1    1.3  1  PF08696.6  DNA replication factor Dna2
      0.062   12.8   1.1        0.2   11.2   0.0    2.2  2  PF04210.8  Tetrahydromethanopterin S-methyltransferase, subunit G
       0.12   10.9   2.8       0.14   10.7   1.9    1.2  1  PF03176.10 MMPL family
       0.15   11.7   1.8       0.62    9.7   0.2    2.3  2  PF09862.4  Protein of unknown function (DUF2089)
       0.31   10.6   6.3       0.19   11.3   2.4    1.8  2  PF03580.9  Herpesvirus UL14-like protein
        1.3    8.9   8.6          1    9.2   3.6    2.0  2  PF12923.2  Ribosomal RNA-processing protein 7 (RRP7)
        2.2    8.5   8.4         19    5.6   3.0    2.2  2  PF05957.8  Bacterial protein of unknown function (DUF883)
        3.6    7.8   7.9          8    6.7   0.0    2.9  3  PF06005.7  Protein of unknown function (DUF904)
          5    7.0   8.4         41    4.1   5.9    2.4  1  PF02050.11 Flagellar FliJ protein


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.2   4.5e-05     0.041       6      29 .]      34      57 ..      32      57 .. 0.91
   2 !   18.4   0.1   8.4e-07   0.00077       3      28 ..      72      97 ..      70      98 .. 0.91

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 4.5e-05
                 HHHHCTTTSSEBEHHHHHHHHHHH CS
   PF00036.27  6 FkefDkDgdGkIsfeEfkealkkl 29
                 + ++D D dG +s +E+ ++l+++
  MMETSP1325-20131115|13565_1 34 MHVLDLDDDGLMSADELEQVLRTM 57
                 5679****************9975 PP

  == domain 2    score: 18.4 bits;  conditional E-value: 8.4e-07
                 HHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27  3 keaFkefDkDgdGkIsfeEfkealkk 28
                  ++++ +D D dG +s+ E++e++kk
  MMETSP1325-20131115|13565_1 72 ADLMEQIDEDMDGVVSVHELREWVKK 97
                 5789*******************987 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   9.9e-06    0.0091       7      28 ..      35      56 ..      30      64 .. 0.89
   2 !   13.0   0.0   7.3e-05     0.066       7      28 ..      76      97 ..      70     106 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 9.9e-06
                 GCC-------B---HHHHHHH. CS
    PF13405.1  7 klfDkdgdGkidaeELrdaLrk 28
                 + +D d dG  +a+EL ++Lr+
  MMETSP1325-20131115|13565_1 35 HVLDLDDDGLMSADELEQVLRT 56
                 579*****************96 PP

  == domain 2    score: 13.0 bits;  conditional E-value: 7.3e-05
                 GCC-------B---HHHHHHH. CS
    PF13405.1  7 klfDkdgdGkidaeELrdaLrk 28
                 +++D d dG ++ +ELr + +k
  MMETSP1325-20131115|13565_1 76 EQIDEDMDGVVSVHELREWVKK 97
                 789**************99885 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.2   0.00046      0.42       7      24 ..      36      53 ..      32      54 .. 0.89
   2 !   16.4   0.0     4e-06    0.0036       3      23 ..      73      93 ..      71      96 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 0.00046
                 HH--S----B-HHHHHHH CS
    PF13202.1  7 afDlNgDGkIsreELkrl 24
                 ++Dl+ DG  s++EL+++
  MMETSP1325-20131115|13565_1 36 VLDLDDDGLMSADELEQV 53
                 69*************997 PP

  == domain 2    score: 16.4 bits;  conditional E-value: 4e-06
                 HHHHHH--S----B-HHHHHH CS
    PF13202.1  3 dtFrafDlNgDGkIsreELkr 23
                 d+ +++D + DG +s  EL++
  MMETSP1325-20131115|13565_1 73 DLMEQIDEDMDGVVSVHELRE 93
                 6789***************97 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.2   2.2e-09     2e-06       9      65 ..      37      94 ..      33      95 .. 0.89

  Alignments for each domain:
  == domain 1    score: 27.6 bits;  conditional E-value: 2.2e-09
    PF13499.1  9 lDkdgdgyldkeeLlrllkhlgsels.deevrevldyifkelDkngdGvlsfeEflqa 65
                 lD d dg  + +eL+++l+ +   ++ +ee +  + ++++++D++ dGv+s  E++++
  MMETSP1325-20131115|13565_1 37 LDLDDDGLMSADELEQVLRTMMKVKMtPEEAQSKVADLMEQIDEDMDGVVSVHELREW 94
                 9*****************987543337999999*********************9987 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.15   1.4e+02      31      43 ..      34      46 ..      34      49 .. 0.76
   2 !   15.4   1.8     1e-05    0.0095       2      46 ..      42      90 ..      41      96 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.15
    PF13833.1 31 frefDtdgdGkis 43
                 ++++D+d+dG  s
  MMETSP1325-20131115|13565_1 34 MHVLDLDDDGLMS 46
                 5789******765 PP

  == domain 2    score: 15.4 bits;  conditional E-value: 1e-05
    PF13833.1  2 kGlItreeLkral.allglkglseeevd....ilfrefDtdgdGkisfeE 46
                 +Gl++++eL   l +++++k +++ee++    +l+  +D d dG +s  E
  MMETSP1325-20131115|13565_1 42 DGLMSADELEQVLrTMMKVK-MTPEEAQskvaDLMEQIDEDMDGVVSVHE 90
                 8************6666888.887777633337*************9876 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.5   1.3e-05     0.012      38     110 ..      12      91 ..       2      96 .. 0.74
   2 ?    2.1   0.1      0.19   1.8e+02      15      48 ..      90     122 ..      88     133 .. 0.58

  Alignments for each domain:
  == domain 1    score: 15.5 bits;  conditional E-value: 1.3e-05
    PF10591.4  38 eelekeaekknskeckeaveWkFnqlDtnkdkvlsksElaplrapl....vklehC...ikeffksCDadkdkkisleEW 110
                   + + e+ +  +++++ea++ k + lD + d+++s  El+++ + +    ++ e+    ++ ++++ D d d+ +s++E 
  MMETSP1325-20131115|13565_1  12 LDAMLEKLEADVAKVDEAIGDKMHVLDLDDDGLMSADELEQVLRTMmkvkMTPEEAqskVADLMEQIDEDMDGVVSVHEL 91 
                  455667778888999999**********************9988883433222322222667999999999999998764 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.19
    PF10591.4  15 Rlrdwlknvlaqlkerdeekehseelekeaekkn 48 
                   lr+w+k+ +a+ + + +e    +e e+ aek+ 
  MMETSP1325-20131115|13565_1  90 ELREWVKKERAKKAVKVHED-ILVEDEEAAEKEL 122
                  58899999988888777776.3333333333332 PP

>> PF08696.6  DNA replication factor Dna2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.1   9.2e-05     0.084     118     188 ..      45     113 ..      26     120 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9.2e-05
    PF08696.6 118 laekvlekyleelyllglsadevkeeveeklpaieewaekyvkkspskesisesrekeketlsiskvldiE 188
                  ++ + le++l  ++ ++++ +e++++v + +++i e ++  v+ ++ +e+++  +e+ k+++++++ + +E
  MMETSP1325-20131115|13565_1  45 MSADELEQVLRTMMKVKMTPEEAQSKVADLMEQIDEDMDGVVSVHELREWVK--KERAKKAVKVHEDILVE 113
                  66778999*****************************************998..67777778887766665 PP

>> PF04210.8  Tetrahydromethanopterin S-methyltransferase, subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00022       0.2      14      43 ..       5      34 ..       1      36 [. 0.91
   2 ?    0.1   0.1      0.65   5.9e+02      12      32 ..      66      86 ..      44      97 .. 0.63

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 0.00022
    PF04210.8 14 fnevkkRLDeieekvefvngEvaqriGkkv 43
                 +n+vk+RLD + ek+e  ++ v   iG k+
  MMETSP1325-20131115|13565_1  5 LNRVKSRLDAMLEKLEADVAKVDEAIGDKM 34
                 799***********************9985 PP

  == domain 2    score: 0.1 bits;  conditional E-value: 0.65
    PF04210.8 12 ddfnevkkRLDeieekvefvn 32
                 +   +v + +++i+e ++ v+
  MMETSP1325-20131115|13565_1 66 EAQSKVADLMEQIDEDMDGVV 86
                 223455556666666666555 PP

>> PF03176.10  MMPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.9   0.00015      0.14      23      97 ..      44     127 ..      13     133 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00015
   PF03176.10  23 eadsdkiivvvlaegdealgsaaaeaavdelvdelkkdtkhvgevsdf.........lsdpd...vaaafvSkDgkaaralvtlegd 97 
                  + + d++ +v+ ++ + ++++++a++ v +l++++ +d ++v +v  +             +   v++ ++ +D++aa   ++ e++
  MMETSP1325-20131115|13565_1  44 LMSADELEQVLRTMMKVKMTPEEAQSKVADLMEQIDEDMDGVVSVHELrewvkkeraK---KavkVHEDILVEDEEAAEKELSAEAE 127
                  567789999*************************************998855544432...04459999999999998877777654 PP

>> PF09862.4  Protein of unknown function (DUF2089)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.2   0.00068      0.62      65     112 ..       7      54 ..       3      72 .. 0.76
   2 ?   -1.2   0.0       1.7   1.5e+03      84      95 ..     100     111 ..      71     132 .. 0.52

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00068
    PF09862.4  65 tvrnrLdevlaalgleeeeeeekeeekkeildklekgeisveeAlklL 112
                   v++rLd++l++l +   + +e+  +k ++ld  + g +s++e  ++L
  MMETSP1325-20131115|13565_1   7 RVKSRLDAMLEKLEADVAKVDEAIGDKMHVLDLDDDGLMSADELEQVL 54 
                  5999**********9777777777777777777777777777755444 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 1.7
    PF09862.4  84 eeekeeekkeil 95 
                  ++++ + +++il
  MMETSP1325-20131115|13565_1 100 AKKAVKVHEDIL 111
                  333333344444 PP

>> PF03580.9  Herpesvirus UL14-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.68   6.2e+02      56      77 ..      11      32 ..       3      42 .. 0.49
   2 ?   11.3   2.4   0.00021      0.19      41     117 ..      44     121 ..      41     133 .. 0.83

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.68
    PF03580.9 56 rsnarlesveqkaraikarvee 77
                 r +a le++e  ++++ +++ +
  MMETSP1325-20131115|13565_1 11 RLDAMLEKLEADVAKVDEAIGD 32
                 3344444444444444444433 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00021
    PF03580.9  41 ftsAkeaeadleaqlrsnarlesveqkaraikarveeQaalreiLdanRrylrpdfle.kldaaedalldkeerLeea 117
                  ++sA e e+ l + +++++  e+ + k++++ ++++e ++     ++ R +++++ ++ +    ed l+++ee  e+ 
  MMETSP1325-20131115|13565_1  44 LMSADELEQVLRTMMKVKMTPEEAQSKVADLMEQIDEDMDGVVSVHELREWVKKERAKkAVKVHEDILVEDEEAAEKE 121
                  79**************************************************99876515677788888998877665 PP

>> PF12923.2  Ribosomal RNA-processing protein 7 (RRP7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.38   3.5e+02      99     121 ..       6      28 ..       3      33 .. 0.84
   2 ?    9.2   3.6    0.0011         1      13      88 ..      44     121 ..      31     133 .. 0.61

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.38
    PF12923.2  99 ekkkeelaeLrkkFeeDkkkiek 121
                  ++ k++l  +++k e+D +k+ +
  MMETSP1325-20131115|13565_1   6 NRVKSRLDAMLEKLEADVAKVDE 28 
                  667899999999***99999975 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.0011
    PF12923.2  13 lpdeealqeevdeymekydkreeeakeeakkesepde..DGfitVtrkkkkkkaglskkkaeeekakekekkkkkkke 88 
                  l+++++l++ + ++m+   + ee++++ a  +++ de  DG + V + +   k++ +kk+++ ++    e ++  +ke
  MMETSP1325-20131115|13565_1  44 LMSADELEQVLRTMMKVKMTPEEAQSKVADLMEQIDEdmDGVVSVHELREWVKKERAKKAVKVHEDILVEDEEAAEKE 121
                  78999999999**999999999999998855566666559***99988444333333333333333222222222222 PP

>> PF05957.8  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.029        27      27      59 ..       3      35 ..       1      40 [. 0.86
   2 ?    5.6   3.0     0.021        19       4      68 ..      47     110 ..      45     128 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.029
    PF05957.8 27 eeaeelReraeealerarerlrdaedavrerak 59
                 ++++++++r++++le++ + ++++ +a+ ++++
  MMETSP1325-20131115|13565_1  3 RTLNRVKSRLDAMLEKLEADVAKVDEAIGDKMH 35
                 578899999999999999999999999888876 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.021
    PF05957.8   4 eaeletlladleellksaadeageeaeelReraeealerarerlrdaedavrerakeaaeaadey 68 
                  ++ele++l ++ + +k++ +ea++++++l e+++e ++ + +  +  e   +erak+a++  ++ 
  MMETSP1325-20131115|13565_1  47 ADELEQVLRTMMK-VKMTPEEAQSKVADLMEQIDEDMDGVVSVHELREWVKKERAKKAVKVHEDI 110
                  5899999999999.5699999*****************999988888888999999999988775 PP

>> PF06005.7  Protein of unknown function (DUF904)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0088         8      56      70 ..       6      20 ..       3      22 .. 0.89
   2 ?    5.2   0.1     0.026        24      30      71 ..      39      80 ..      25      81 .. 0.80
   3 ?   -1.3   0.7       2.7   2.5e+03      41      62 ..     101     122 ..      87     130 .. 0.45

  Alignments for each domain:
  == domain 1    score: 6.7 bits;  conditional E-value: 0.0088
                 ---TTHHHHH----- CS
    PF06005.7 56 eawqerlralLgkle 70
                 + +++rl+a+L+kle
  MMETSP1325-20131115|13565_1  6 NRVKSRLDAMLEKLE 20
                 6789*********98 PP

  == domain 2    score: 5.2 bits;  conditional E-value: 0.026
                 HHHHHHHHHHHHHHHHHHHHHHHHHH---TTHHHHH------ CS
    PF06005.7 30 LkeeneqlkeeneeLeeenkklkeereawqerlralLgklee 71
                 L ++   +++e e++++   k+k   e+ q+++  l+++++e
  MMETSP1325-20131115|13565_1 39 LDDDGLMSADELEQVLRTMMKVKMTPEEAQSKVADLMEQIDE 80
                 555444455788999999999999**************9997 PP

  == domain 3    score: -1.3 bits;  conditional E-value: 2.7
                  HHHHHHHHHHHHHHH---TTHH CS
    PF06005.7  41 neeLeeenkklkeereawqerl 62 
                  +++++   + l e+ ea ++ l
  MMETSP1325-20131115|13565_1 101 KKAVKVHEDILVEDEEAAEKEL 122
                  3333333333334444444444 PP

>> PF02050.11  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   5.9     0.045        41      41     107 ..      44     110 ..       3     132 .. 0.71

  Alignments for each domain:
  == domain 1    score: 4.1 bits;  conditional E-value: 0.045
   PF02050.11  41 glsaaelrnyqafisaldeaiaqqqqeleqaekqveqareewqeanqelkklekLeerekkkeqkee 107
                   +sa el ++ + + +++++ +++q++++++ +q+++  +   + +  ++ ++k +++++ k ++ +
  MMETSP1325-20131115|13565_1  44 LMSADELEQVLRTMMKVKMTPEEAQSKVADLMEQIDEDMDGVVSVHELREWVKKERAKKAVKVHEDI 110
                  489********************************98776655555555555555555554444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1342  (0.0981568); expected 273.4 (0.02)
Passed bias filter:                      690  (0.0504681); expected 273.4 (0.02)
Passed Vit filter:                        80  (0.00585138); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.47
# Mc/sec: 683.22
//
Query:       MMETSP1325-20131115|13569_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-17   63.1  16.3    7.5e-10   38.0   1.3    3.2  4  PF12799.2  Leucine Rich repeats (2 copies)
    2.1e-11   43.2   7.5    1.2e-07   31.1   0.3    2.9  3  PF13855.1  Leucine rich repeat
      1e-07   30.8   3.8       0.23   11.5   0.0    4.3  4  PF00560.28 Leucine Rich Repeat
    7.7e-07   28.4   4.9       0.24   11.4   0.1    3.8  3  PF13516.1  Leucine Rich repeat
    0.00012   21.5   6.2       0.86    9.9   0.2    4.5  4  PF13504.1  Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.1   2.9e+03      16      29 ..      45      58 ..      44      63 .. 0.67
   2 !   24.3   1.0   5.4e-09   1.5e-05       2      43 ..      60     100 ..      59     101 .. 0.93
   3 !   38.0   1.3   2.7e-13   7.5e-10       2      43 ..     105     145 ..     104     151 .. 0.90
   4 !   23.0   0.2   1.4e-08   3.8e-05       2      38 ..     127     165 ..     127     182 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 1.1
    PF12799.2 16 lppelanLpn.LktL 29
                 +pp + +L n L +L
  MMETSP1325-20131115|13569_1 45 IPP-ILKLDNaLNSL 58
                 788.88876545554 PP

  == domain 2    score: 24.3 bits;  conditional E-value: 5.4e-09
    PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43 
                  n e L Ls N I  l p l +++nLk L+L +N+i +++ L+
  MMETSP1325-20131115|13569_1  60 NCERLALSTNAIDRLIP-LNGMKNLKILSLGRNQIKKIEKLD 100
                  668899***********.********************9985 PP

  == domain 3    score: 38.0 bits;  conditional E-value: 2.7e-13
    PF12799.2   2 nLevLdLsnNnIkdlppelanLpnLktLnLsnNpisdlsaLa 43 
                   Le+L+ s+N+I +l++ l +L+nL++L+L+nN+i  + +L+
  MMETSP1325-20131115|13569_1 105 TLEELWMSYNQIGSLDG-LQGLNNLQVLYLANNNIKTWGELD 145
                  69***************.*****************9765554 PP

  == domain 4    score: 23.0 bits;  conditional E-value: 1.4e-08
    PF12799.2   2 nLevLdLsnNnIkdlppe..lanLpnLktLnLsnNpisd 38 
                  nL+vL+L+nNnIk  ++   la+L+ L+     +Npi++
  MMETSP1325-20131115|13569_1 127 NLQVLYLANNNIKTWGELdkLAGLNGLRDVLFVGNPIYE 165
                  9************6555334999999*999999999975 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.5   4.8e-06     0.013       4      41 ..      62      97 ..      59     100 .. 0.90
   2 !   31.1   0.3   4.6e-11   1.2e-07       2      61 .]     105     163 ..     104     163 .. 0.91
   3 ?   -2.4   0.0       1.4   3.8e+03      20      30 ..     176     186 ..     173     187 .. 0.63

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 4.8e-06
    PF13855.1  4 keLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksis 41
                 ++L Ls N + ++    ++g++nLk L+L++n +k i+
  MMETSP1325-20131115|13569_1 62 ERLALSTNAIDRLI--PLNGMKNLKILSLGRNQIKKIE 97
                 57899999999997..6******************997 PP

  == domain 2    score: 31.1 bits;  conditional E-value: 4.6e-11
    PF13855.1   2 nLkeLdLsnNrlkvipdgaFkglsnLkvLdLsgnnlksisp.eafkgLpsLreLnLsgNrl 61 
                   L+eL+ s N + +++   ++gl+nL+vL+L +nn+k+  + + ++gL+ Lr + + gN++
  MMETSP1325-20131115|13569_1 105 TLEELWMSYNQIGSLDG--LQGLNNLQVLYLANNNIKTWGElDKLAGLNGLRDVLFVGNPI 163
                  59*************96..*****************98866366************99987 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 1.4
    PF13855.1  20 aFkglsnLkvL 30 
                  ++k+l+n +++
  MMETSP1325-20131115|13569_1 176 VLKHLPNVMKI 186
                  56677776665 PP

>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.4   3.8e+03       3      16 ..      62      76 ..      57      81 .. 0.67
   2 !    8.7   0.1   0.00069       1.9       1      17 [.      82      98 ..      82     101 .. 0.90
   3 !    9.0   0.0   0.00056       1.5       2      22 .]     106     125 ..     105     125 .. 0.87
   4 !   11.5   0.0   8.4e-05      0.23       1      15 [.     127     144 ..     127     167 .. 0.83

  Alignments for each domain:
  == domain 1    score: -1.4 bits;  conditional E-value: 1.4
                 SEEEETSSBCB.CHH CS
   PF00560.28  3 eeLdLsgNnlt.slp 16
                 e+L Ls N +   +p
  MMETSP1325-20131115|13569_1 62 ERLALSTNAIDrLIP 76
                 667788777763355 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00069
                 TESEEEETSSBCBCHHH CS
   PF00560.28  1 nLeeLdLsgNnltslpp 17
                 nL++L+L +N+++++ +
  MMETSP1325-20131115|13569_1 82 NLKILSLGRNQIKKIEK 98
                 8************9876 PP

  == domain 3    score: 9.0 bits;  conditional E-value: 0.00056
                  ESEEEETSSBCBCHHHHHHHH CS
   PF00560.28   2 LeeLdLsgNnltslppslsnL 22 
                  LeeL +s+N++ sl   l++L
  MMETSP1325-20131115|13569_1 106 LEELWMSYNQIGSLDG-LQGL 125
                  9***********9988.7765 PP

  == domain 4    score: 11.5 bits;  conditional E-value: 8.4e-05
                  TESEEEETSSBCBC...H CS
   PF00560.28   1 nLeeLdLsgNnlts...l 15 
                  nL++L+L +Nn+++   l
  MMETSP1325-20131115|13569_1 127 NLQVLYLANNNIKTwgeL 144
                  8***********984443 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0009       2.4       1      16 [.      80      95 ..      80      99 .. 0.90
   2 !   11.4   0.1   8.6e-05      0.24       3      23 ..     105     126 ..     104     127 .. 0.88
   3 !    9.9   0.4   0.00028      0.77       1      15 [.     125     139 ..     125     148 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.0009
    PF13516.1  1 lknLtsLdLsnNqigd 16
                 +knL+ L L++Nqi +
  MMETSP1325-20131115|13569_1 80 MKNLKILSLGRNQIKK 95
                 69***********975 PP

  == domain 2    score: 11.4 bits;  conditional E-value: 8.6e-05
    PF13516.1   3 nLtsLdLsnNqigd.eGlsaLa 23 
                  +L++L +s+Nqig+ +Gl++L 
  MMETSP1325-20131115|13569_1 105 TLEELWMSYNQIGSlDGLQGLN 126
                  69***********988899886 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 0.00028
    PF13516.1   1 lknLtsLdLsnNqig 15 
                  l+nL++L L nN+i 
  MMETSP1325-20131115|13569_1 125 LNNLQVLYLANNNIK 139
                  69***********95 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       1.1   3.1e+03       4      12 ..      62      70 ..      50      75 .. 0.62
   2 !    7.3   0.0    0.0023       6.2       2      15 ..      82      95 ..      81      99 .. 0.87
   3 ?    4.1   0.0     0.028        76       3      16 ..     106     119 ..     105     120 .. 0.91
   4 !    9.9   0.2   0.00031      0.86       2      15 ..     127     140 ..     126     154 .. 0.90

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 1.1
    PF13504.1  4 keLdLsgnr 12
                 ++L Ls n 
  MMETSP1325-20131115|13569_1 62 ERLALSTNA 70
                 456666665 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0023
    PF13504.1  2 nLkeLdLsgnrLts 15
                 nLk L+L +n+++ 
  MMETSP1325-20131115|13569_1 82 NLKILSLGRNQIKK 95
                 9**********976 PP

  == domain 3    score: 4.1 bits;  conditional E-value: 0.028
    PF13504.1   3 LkeLdLsgnrLtsL 16 
                  L+eL  s+n++ sL
  MMETSP1325-20131115|13569_1 106 LEELWMSYNQIGSL 119
                  99********9987 PP

  == domain 4    score: 9.9 bits;  conditional E-value: 0.00031
    PF13504.1   2 nLkeLdLsgnrLts 15 
                  nL++L+L++n++++
  MMETSP1325-20131115|13569_1 127 NLQVLYLANNNIKT 140
                  9*********9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      334  (0.0244295); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.53
# Mc/sec: 931.41
//
Query:       MMETSP1325-20131115|13579_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-38  130.1   0.4    7.4e-38  129.5   0.3    1.3  1  PF06201.8 PITH domain


Domain annotation for each model (and alignments):
>> PF06201.8  PITH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.3   5.4e-42   7.4e-38       2     151 ..      23     164 ..      22     165 .. 0.96

  Alignments for each domain:
  == domain 1    score: 129.5 bits;  conditional E-value: 5.4e-42
                  SSTTB-----EES-S-TTS-SHHHH---------.--EE-SS-SSEEEEEEEEEEE---EEEEE-..-------EEEEEES.-S---HHHHTTS--SEEE---T.TTT----EE--TTT-S-EEEEEEEEEE--------EESEEEEE-- CS
    PF06201.8   2 llsqidlsklecLNedsessaakslfksskerldnkyveSdaDeqLlinipFtqsvklhsilikslkeedsaPktiklfiNqqenldFdeaeslkptqtlelseedeeevveialkvvkFqnvnsLtifvedndgeeeetridkiglrGe 151
                  l + id++++ cLNed  + +++ ++ +++      +++Sd+DeqLl++i+F+++vkl++i +++  e++saP tik+f+N + nl+F+++e+lk++qtl+l+ +d  +  + +l +vkFq+v+s+t+fve+n+g +++++++ ++++G+
  MMETSP1325-20131115|13579_1  23 LGEFIDKKQCFCLNEDPAHPHTNLFIGDER-----LFLQSDSDEQLLVHIQFNEVVKLSAINFVGP-EDESAPLTIKVFAN-RLNLGFSDVEDLKAEQTLDLTPADMLADSQTNLYAVKFQRVSSITLFVEENNG-DDVSKLSGLKFFGQ 164
                  7789******************66666666.....79****************************9.**************.*****************************************************.9************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      302  (0.0220889); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.40s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 1235.77
//
Query:       MMETSP1325-20131115|13573_1  [L=334]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-32  111.9   0.0    2.9e-32  111.4   0.0    1.1  1  PF00248.16 Aldo/keto reductase family
     0.0078   15.3   0.1      0.012   14.7   0.0    1.2  1  PF06224.7  Protein of unknown function (DUF1006)


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.4   0.0   4.3e-36   2.9e-32       2     268 ..      18     282 ..      17     291 .. 0.91

  Alignments for each domain:
  == domain 1    score: 111.4 bits;  conditional E-value: 4.3e-36
   PF00248.16   2 lglGtwslgndeisedealellraaleaGinlfDtAeyYgkgqseel.lgealkk..srkkreeviiatKvgrispiseglsrenieesleksLkrlgtdylDllllhrpdpslp....................sieevlealeelkkeGkirhiGvSnfsveileka.kkkkkvkivvvqveynllneleeegllelcaekgvgiiaysplgg....Glltgkylseerkedkeprkdaqdaleelselakehgv.slaqlalryalsrpavgsvipgassieqleenlkalel 268
                  +++Gt+ l++    +  + e + +a++aG++++D Ae Y    s+   +geal +  s+++r+e++++ K+      ++ ++ + ++++++++L+  +tdylD ll+h p p                       +i e+++ +++lk+eG++ +iGvSnf  ++l+++ k++++    +  +e  +   + +++l+ +c+++g+ ++ay p +     Gll+                      ++l++la+e g+ s+  l++  +    +++++i g++++e++  nlka++ 
  MMETSP1325-20131115|13573_1  18 IIYGTMELTE----KGLVTEGICEAVRAGYRALDLAEHY--ESSRGGhIGEALDQlaSEVPRSELWLTHKI----DGMPVGDYAAVKARVQTMLELAHTDYLDALLIHYPLPGGAdlsgdpaaistaanfewfvaNIGEAWANMVKLKEEGLVLNIGVSNFYEQHLQELaKHTAEDGAECWANEVFIDAAHPQKDLVAYCHAQGMVVMAYRPTAFvmvyGLLD-------------------GVMDALQALAEERGLeSVQSLVIETLC--LRGIVPITGTRTVEHMATNLKAAAS 282
                  7888887743....5556666999***************..7777777******999**************....***********************************9999999****************************************************766666669999999999999************************988888888...................56789**********888889999888..8*********************965 PP

>> PF06224.7  Protein of unknown function (DUF1006)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.8e-06     0.012     124     276 ..     175     326 ..     170     329 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.8e-06
    PF06224.7 124 eleaalarr...gw.w.gwkkpskaskralellflegelvvarrergfektydlaervlprev....rsteaealreLvrrylralGpatladlaawsgltkaearaalaelvaegelvevevergrerlfdlpedlaelpdadtpvrlLspfDpllldrar 276
                  el+++ a++    w    +  + ++ k ++ + +++g +v a r+  f  +y l++ v+++ +    ++   e+++ Lv + l   G++     ++   +  + ++aa++    +g    v  ++       lp+dla++ ++++ v +++ +D++ ++ ar
  MMETSP1325-20131115|13573_1 175 ELAKHTAEDgaeCWaNeVFIDAAHPQKDLVAYCHAQGMVVMAYRPTAFVMVYGLLDGVMDA-LqalaEERGLESVQSLVIETLCLRGIVPITGTRTVEHMA-TNLKAAAS----KGNSASVIPAK----GAPLPADLAPVEEQAEMVEMMGGLDEYAMAFAR 326
                  66666666664322222222467899********************************733.333322224455*******************99888855.69999996....44444555443....67799999*********************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       408  (0.029842); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.36s 00:00:01.04 Elapsed: 00:00:00.62
# Mc/sec: 1290.94
//
Query:       MMETSP1325-20131115|13587_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|13588_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 327.19
//
Query:       MMETSP1325-20131115|13596_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 557.61
//
Query:       MMETSP1325-20131115|13599_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-08   34.9   0.1    1.2e-08   34.8   0.1    1.0  1  PF02330.11 Mitochondrial glycoprotein


Domain annotation for each model (and alignments):
>> PF02330.11  Mitochondrial glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.1     9e-13   1.2e-08      98     169 ..       3      66 .]       1      66 [] 0.90

  Alignments for each domain:
  == domain 1    score: 34.8 bits;  conditional E-value: 9e-13
                  EEEEEEEE--EEEEEEEE-TT--SEEEEEEEEECSHHHH..SHHHCHHCTS-EEEGGGS-HHHHHHHHHHHH CS
   PF02330.11  98 kllvleiskpedslefeleaqedlfsveevyfqksgdslnesveaewrktyygpsfknLDeeLqdllerYLe 169
                  ++++ +++k+ d l f+++a  +  +++ v   +sg+s      +  ++ y gp f++LDe+L++++++YLe
  MMETSP1325-20131115|13599_1   3 VAFTADVHKGSDILRFHCTAS-EVVNIDTVEYLPSGES-----VS--ENAYTGPDFDELDEDLKNAFHEYLE 66 
                  57899**************95.689*************.....33..4479********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       200  (0.0146284); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.55
# Mc/sec: 287.56
//
Query:       MMETSP1325-20131115|13597_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.9e-21   74.3   0.0    1.1e-19   70.2   0.0    2.0  1  PF04041.8 Domain of unknown function (DUF377)


Domain annotation for each model (and alignments):
>> PF04041.8  Domain of unknown function (DUF377)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.0   7.8e-24   1.1e-19     191     302 ..      11     139 ..       4     145 .. 0.85

  Alignments for each domain:
  == domain 1    score: 70.2 bits;  conditional E-value: 7.8e-24
                  E---SS-GGGSS--------B-B----EE----B--................----....BB-B--EEE-SS-TTSEEEEBSS-SB-S-SHHHH----SSB----EEEE-TT--EEEEE--TTT-BEEEE-- CS
    PF04041.8 191 lasprkimfdalkigwgtppvevkegllvlihGnva................tekl....vYrvgaalldledPskvlarteeyilePeeeyEeyGdvpnvvFpcealvdeegkvllyyGaADtavglaeie 302
                  +  pr++ fd+ ++++g+p v +  g ++ i+ n++                ++ +    +Y+ g +ll ledP++vl rt +   +Pe +yE+ G+v nv F +e+lv++ g  llyyG AD  +++a+++
  MMETSP1325-20131115|13597_1  11 VFGPRRGSFDSDLVEPGPPAVITPVG-ILFIY-NSKnkwcdygrngkcergeNDATippgTYSAGQVLLSLEDPTRVLHRTDHSFFKPEMQYEKTGQVANVCF-LEGLVYHRGEWLLYYGTADSKIAVAKWP 139
                  667999********************.66666.5555567777777776654222233337******************************************.**************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       208  (0.0152136); expected 273.4 (0.02)
Passed bias filter:                      202  (0.0147747); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 737.70
//
Query:       MMETSP1325-20131115|13600_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|13601_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.51
# Mc/sec: 263.13
//
Query:       MMETSP1325-20131115|13598_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 1112.97
//
Query:       MMETSP1325-20131115|13604_1  [L=299]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.39   10.5   5.0       0.64    9.8   3.5    1.2  1  PF04103.10 CD20-like family
       0.79    9.4   5.4       0.27   10.9   1.2    2.0  2  PF05754.9  Domain of unknown function (DUF834)


Domain annotation for each model (and alignments):
>> PF04103.10  CD20-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.5   9.4e-05      0.64       5      86 ..     155     236 ..     153     242 .. 0.80

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 9.4e-05
   PF04103.10   5 vQIllGliilvlgiillsvsss..llvlsgypfWgglifiisGslsiaaekkptkllvkgslglnivSlilalagiillivsla 86 
                  ++ l++  ++ +g +++s  +s  + ++  +p+  ++ f+++G   ++a   +t+ l+ g ++l  +S ++++ g +l+ v l+
  MMETSP1325-20131115|13604_1 155 LHCLVAAALVTFGLVVTSSLPSwpVAATEPAPLF-AIRFMLTGCTVVVADMAKTTALMLG-MLLAYASGFVSALGAVLVAVVLR 236
                  6778999999999999999999956666666666.****************999866666.55667888888888888888776 PP

>> PF05754.9  Domain of unknown function (DUF834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.37   2.5e+03      30      38 ..      68      76 ..      47      79 .. 0.57
   2 ?   10.9   1.2   3.9e-05      0.27       9      41 ..     115     147 ..     108     149 .. 0.85

  Alignments for each domain:
  == domain 1    score: -1.8 bits;  conditional E-value: 0.37
    PF05754.9 30 vdddgGAPa 38
                    ++GAP 
  MMETSP1325-20131115|13604_1 68 MTKGDGAPT 76
                 335777776 PP

  == domain 2    score: 10.9 bits;  conditional E-value: 3.9e-05
    PF05754.9   9 tttadtartaaatrekGgaarvdddgGAPavgg 41 
                  +++++   ++ ++r++G   rv+ +gGA a +g
  MMETSP1325-20131115|13604_1 115 QGQPKSRTRRHGCRSDGVGMRVHVGGGAGATKG 147
                  5667778899******************99766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 1462.27
//
Query:       MMETSP1325-20131115|13609_1  [L=213]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-18   66.3   0.1    2.5e-18   65.9   0.1    1.2  1  PF02296.11 Alpha adaptin AP2, C-terminal domain
    8.1e-05   22.7   0.0    0.00016   21.8   0.0    1.5  1  PF02883.15 Adaptin C-terminal domain
     0.0024   16.6   0.0     0.0026   16.4   0.0    1.1  1  PF07718.7  Coatamer beta C-terminal region


Domain annotation for each model (and alignments):
>> PF02296.11  Alpha adaptin AP2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.1   5.5e-22   2.5e-18       1     112 [.      87     206 ..      87     207 .. 0.82

  Alignments for each domain:
  == domain 1    score: 65.9 bits;  conditional E-value: 5.5e-22
   PF02296.11   1 FleptelsaedFfkrWkqlggapreaqkifklkaaekeideesvrkvl..eGfrlavlkgvdpnpenivgagvlhtsesgk......vgcllrlepnkqakmvrltiratdesvskallk 112
                  F++++  sa++F +rWk l g++re q + + +++  +   +++++++  +G++la+++gvd+n+  + +ag ++t +         vgcllrle n+q+  +rlt+ra +  +s al +
  MMETSP1325-20131115|13609_1  87 FIQAVPSSADEFKTRWKALEGQNREQQVVWNTSTSIDSERMQRIKTAIldQGLHLAIIEGVDQNEYILSAAGQFRTGTVSPsgakvsVGCLLRLEANAQQSAFRLTVRAVHGMISVALKN 206
                  78888899*****************99999866444444444445555589***********************9974322333578***********************9999988765 PP

>> PF02883.15  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   3.5e-08   0.00016      27     109 ..       2      79 ..       1      81 [. 0.92

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 3.5e-08
                  EEEEEEEE-SSS-EEEEEEEEE--TTSEE-----S-S-B------EE---EES...--------EEEEEEEEEEETTE.E..EEE CS
   PF02883.15  27 ritlfftNkssqpitnfsfqaavpkslklqlqppssttlppgtqiqqvllven.refsepakkklrlrvrisytvggs.qvlelk 109
                  ri+lf++Nk++ p+t +s        l++q qp   ++l+pg++++  +  e   +  +      ++ ++i ++ gg+ ++++l 
  MMETSP1325-20131115|13609_1   2 RISLFIKNKQTVPVTGLSVDMPEVSYLRVQTQPT-APNLEPGASSEHKIAAEAmAPYEG------APEFAIAFQAGGAsHRYTLR 79 
                  89****************9996669********9.99****************999999......************98888776 PP

>> PF07718.7  Coatamer beta C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   5.8e-07    0.0026      83     228 ..       9     155 ..       3     209 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 5.8e-07
    PF07718.7  83 nqtketLqnvtlelatlgdlklvekptpltlapesvksikatvkvsstenGvifGnivyeadeasdtnvvi.LedvkidildyiePakitdeeFrklWkefewenk.vtv..ktsikdleealkevlkstnmkiLtpeval.iegdegfla 228
                  n+ +   + +++++  +  l++  +pt  +l+p  +++ k+      + +G     i+++a+  + ++++  L +v    + +i+    + +eF++ Wk++e +n+ ++v  +ts++  +e ++ + +++  + L + +++ ++++e +l+
  MMETSP1325-20131115|13609_1   9 NKQTVPVTGLSVDMPEVSYLRVQTQPTAPNLEPGASSEHKIAAEAMAPYEGAPEFAIAFQAGG-ASHRYTLrLPTVA---SCFIQAVPSSADEFKTRWKALEGQNReQQVvwNTSTSIDSERMQRIKTAILDQGLHLAIIEgVDQNEYILS 155
                  6666667788999999999*****************************************555.5556666588886...67********************8875334412666666678888888876555588888772344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      248  (0.0181393); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.36s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1086.01
//
Query:       MMETSP1325-20131115|13612_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.6    6.3   7.5        1.8    6.1   5.2    1.0  1  PF05518.6 Totivirus coat protein


Domain annotation for each model (and alignments):
>> PF05518.6  Totivirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.2   0.00013       1.8     693     749 ..       7      63 ..       2      71 .. 0.61

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.00013
    PF05518.6 693 alrapqlpraggasdGgggvppppalgaaagdapsppssgsslaasaeapaepeppa 749
                  a++a ++p a++ + Ggg+ +pp a +aa+ ++p+p+ sg +l+++a ++  +++ +
  MMETSP1325-20131115|13612_1   7 AAPAARPPCAPTYGTGGGTGAPPLASAAAPKPPPPPAFSGITLTPAAVPTSSVVAYG 63 
                  233333344344556666666666666666666677778888888887777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|13610_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.35s 00:00:00.98 Elapsed: 00:00:00.70
# Mc/sec: 1167.37
//
Query:       MMETSP1325-20131115|13627_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-20   71.1   0.1    1.4e-06   27.8   0.0    3.1  3  PF00400.27 WD domain, G-beta repeat
     0.0026   15.8   0.5        0.8    7.6   0.1    2.0  2  PF11715.3  Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   7.6e-08   0.00052      12      39 .]      11      38 ..       3      38 .. 0.92
   2 !   27.8   0.0     2e-10   1.4e-06       3      39 .]      44      80 ..      42      80 .. 0.95
   3 !   20.3   0.2   4.7e-08   0.00032      16      39 .]     107     130 ..     102     130 .. 0.93

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 7.6e-08
                 SSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27 12 spVtcvafspdgpllasgSrDgtirlWd 39
                   +t+ +fs+d  l+++++ D+ i+ Wd
  MMETSP1325-20131115|13627_1 11 YQITAACFSHDNELVFTAGIDNEIKAWD 38
                 679************************9 PP

  == domain 2    score: 27.8 bits;  conditional E-value: 2e-10
                 EEEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27  3 ckatlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 ++ +l+gH+++Vt +a+sp+g  l++ S D+++  Wd
  MMETSP1325-20131115|13627_1 44 VVFVLEGHKDTVTGMAVSPNGASLLTNSMDKSLIQWD 80
                 6789********************************8 PP

  == domain 3    score: 20.3 bits;  conditional E-value: 4.7e-08
                  EEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27  16 cvafspdgpllasgSrDgtirlWd 39 
                   +++s dg ++  gS+D+ +++Wd
  MMETSP1325-20131115|13627_1 107 KCSWSADGEMISAGSSDHVVHIWD 130
                  69*********************9 PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0   0.00017       1.2     225     253 ..      16      44 ..       4      61 .. 0.79
   2 !    7.6   0.1   0.00012       0.8     180     252 ..      61     135 ..      54     138 .] 0.79

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.00017
    PF11715.3 225 ssevegqtfvftlsrDgkLRvWnletgqc 253
                      +++++vft   D+++++W+ ++ + 
  MMETSP1325-20131115|13627_1  16 ACFSHDNELVFTAGIDNEIKAWDRRNESV 44 
                  34678******************999876 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.00012
    PF11715.3 180 dtdggawketkysssswlsslrgllgfk......yrkarsassaaasldvsssevegqtfvftlsrDgkLRvWnletgq 252
                  +++g+ + +  ++ s++++++r+++  +      ++ +++ + + +  + s     + +++ + s D+++ +W++ tg 
  MMETSP1325-20131115|13627_1  61 SPNGASLLTNSMDKSLIQWDVRPFVNESrfskqfFGVEHNMEKNLLKCSWSA----DGEMISAGSSDHVVHIWDVPTGE 135
                  46899999999*************9999965555555555555555555555....999****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.34s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 703.61
//
Query:       MMETSP1325-20131115|13626_1  [L=446]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-34  118.7   8.8    4.8e-34  117.6   6.1    1.5  1  PF14257.1  Domain of unknown function (DUF4349)
  ------ inclusion threshold ------
      0.069   13.3   7.7       0.41   10.8   5.3    2.3  1  PF05531.7  Nucleopolyhedrovirus P10 protein
        7.9    6.0  10.7        5.1    6.6   1.0    3.4  3  PF00957.16 Synaptobrevin


Domain annotation for each model (and alignments):
>> PF14257.1  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.6   6.1   1.1e-37   4.8e-34      30     210 ..      88     313 ..      29     323 .. 0.79

  Alignments for each domain:
  == domain 1    score: 117.6 bits;  conditional E-value: 1.1e-37
    PF14257.1  30 a...................................esaeapadaaaaaadrkiirtaslslev..kdvdeaaaalralveaagGyvesssesss......edegdrrsasltlRvPaerfdafldelegl...gkvesrsisaeDVTeeyvDleaRlkaleaseerllallekaetvedllevereLsrvqaeiEsleaqlryLddrvaystvtvelreeeaatpa 210
                  +                                   +  + +++ ++++++ +++r++++++ +   ++++ a+++++lv++ gG+v++++++ +      ++++ + + ++tl+vP  +f a+ d++++l    ++ s+s s+eDVT+++vD+ aR ++l a++ +l +l+eka+++e +l+++reLs+v +++E+ +a++  L+++  +st++++lr+++ + p 
  MMETSP1325-20131115|13626_1  88 RsasrvaaasvmdrgegyggggysgagetlgqellkSMDSGTSSFDPKTVETMLVRQGNIDIVSdpTKLESLADEATSLVTKRGGFVAERNTYRNrvswgkRRGEFDVNIHMTLKVPVMEFFATTDAIKALvdkNEIASSSDSVEDVTDQFVDVAARAATLDATQMQLVKLMEKANEIEQVLKIQRELSNVVQQLEAKKARMHVLQQKSGTSTIHLNLRPKDDE-PX 313
                  022222233333333445556666666777777774333344444778888***********997789***********************98777777667777788889******************8766469************************************************************************************8653.32 PP

>> PF05531.7  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   5.3   9.1e-05      0.41      11      66 ..     213     270 ..     210     312 .. 0.91

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 9.1e-05
    PF05531.7  11 adikavddk..VdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenIqdiLn 66 
                  ++ika+ dk  + + +++v+dv++++ dv    + Lda + qL +l +k ++I+++L 
  MMETSP1325-20131115|13626_1 213 DAIKALVDKneIASSSDSVEDVTDQFVDVAARAATLDATQMQLVKLMEKANEIEQVLK 270
                  688888776457788899**************************************98 PP

>> PF00957.16  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   1.0    0.0011       5.1      58      89 .]       1      32 [.       1      32 [. 0.93
   2 ?    3.1   0.0     0.014        64      27      64 ..     150     187 ..     135     192 .. 0.79
   3 ?   -0.2   0.9      0.15   6.9e+02      23      40 ..     265     282 ..     244     300 .. 0.56

  Alignments for each domain:
  == domain 1    score: 6.6 bits;  conditional E-value: 0.0011
   PF00957.16 58 krkmwwknmklliililvvlililiiiivicg 89
                 +r m++ + k +++ +++v+i+i +++++icg
  MMETSP1325-20131115|13626_1  1 RRFMLLTDRKGMVMKGFIVVIMITLVVSAICG 32
                 678999999*********************96 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.014
   PF00957.16  27 lergekldeLvdkteaLqesaqqFkkqarklkrkmwwk 64 
                  ++   kl++L d++ +L ++  +F  + ++ ++++ w 
  MMETSP1325-20131115|13626_1 150 VSDPTKLESLADEATSLVTKRGGFVAERNTYRNRVSWG 187
                  44567999999999999999999999999999999996 PP

  == domain 3    score: -0.2 bits;  conditional E-value: 0.15
   PF00957.16  23 idkvlergekldeLvdkt 40 
                  i++vl+ + +l+++v++ 
  MMETSP1325-20131115|13626_1 265 IEQVLKIQRELSNVVQQL 282
                  455555555555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       844  (0.061732); expected 273.4 (0.02)
Passed bias filter:                      448  (0.0327677); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.36s 00:00:01.21 Elapsed: 00:00:00.65
# Mc/sec: 1644.27
//
Query:       MMETSP1325-20131115|13634_1  [L=163]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.40s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 781.21
//
Query:       MMETSP1325-20131115|13633_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00017   21.7   0.4     0.0016   18.6   0.1    2.5  2  PF09177.6  Syntaxin 6, N-terminal
     0.0024   17.3   4.9     0.0024   17.3   3.4    2.0  3  PF05739.14 SNARE domain


Domain annotation for each model (and alignments):
>> PF09177.6  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   2.4e-07    0.0016      23      93 ..      10      77 ..       1      79 [. 0.84
   2 ?   -1.4   0.0      0.41   2.8e+03       9      26 ..     153     170 ..     121     178 .. 0.61

  Alignments for each domain:
  == domain 1    score: 18.6 bits;  conditional E-value: 2.4e-07
    PF09177.6 23 sweelrsdstsskelkeltkeLenalesiewdledLeeavsvveknpekfglseeeisrRkqfvaeireei 93
                  w e+ +++    ++ e++ + + +   +++ +  L+   + +ek+p+ f+++++e++rR+ +v+ ++++i
  MMETSP1325-20131115|13633_1 10 DWLEDFERTA---NIAEAQGDPSGSSAGLNKAVARLDSGLKQIEKDPTAFRVDAREVERRRTLVDGLKSQI 77
                 5666666655...7777777777788889999999999******************************998 PP

  == domain 2    score: -1.4 bits;  conditional E-value: 0.41
    PF09177.6   9 evqksidkleslyrswee 26 
                  +v+k+   l++ +++  +
  MMETSP1325-20131115|13633_1 153 DVDKATMGLRQQTKTANK 170
                  344444444444444444 PP

>> PF05739.14  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.74   5.1e+03      44      56 ..      38      50 ..      36      51 .. 0.57
   2 ?   -2.7   0.0      0.64   4.4e+03      24      39 ..      60      75 ..      60      77 .. 0.74
   3 !   17.3   3.4   3.5e-07    0.0024       1      61 [.     114     174 ..     114     176 .. 0.96

  Alignments for each domain:
  == domain 1    score: -2.9 bits;  conditional E-value: 0.74
                 HHHHHHHHHHHHH CS
   PF05739.14 44 assrverankrlk 56
                 a+ r++++ k++ 
  MMETSP1325-20131115|13633_1 38 AVARLDSGLKQIE 50
                 5556666666654 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.64
                 HHHHHHHHHHHHHHHH CS
   PF05739.14 24 geeveeQgelldrIdn 39
                 ++eve   +l+d +++
  MMETSP1325-20131115|13633_1 60 AREVERRRTLVDGLKS 75
                 5788888888888776 PP

  == domain 3    score: 17.3 bits;  conditional E-value: 3.5e-07
                  HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   PF05739.14   1 erdeeleelessigeLkqlfldmgeeveeQgelldrIdnnvesassrverankrlkkalry 61 
                  e+d  ++++ +++ +L++ ++ ++ee   +  lld++d +v++a+  +++ +k ++k +++
  MMETSP1325-20131115|13633_1 114 EQDVLIDQIADGVDRLHDRAIMINEESTLHKSLLDDMDVDVDKATMGLRQQTKTANKIRQS 174
                  79999**************************************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      375  (0.0274283); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 1040.12
//
Query:       MMETSP1325-20131115|13638_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|13643_1  [L=519]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.5e-148  494.6   2.2   2.8e-148  494.4   1.5    1.0  1  PF00118.19 TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
      0.016   14.8   0.2      0.053   13.1   0.1    1.9  1  PF07930.7  D-aminopeptidase, domain B


Domain annotation for each model (and alignments):
>> PF00118.19  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  494.4   1.5  4.2e-152  2.8e-148       1     486 [.      23     515 ..      23     517 .. 0.97

  Alignments for each domain:
  == domain 1    score: 494.4 bits;  conditional E-value: 4.2e-152
   PF00118.19   1 ladivkttLGPkGrnkmlvnkggkivitndgatilkelelqhpvakllveaaksqdeevGDGtttaviLageLleeaeklikagihpteiirglelaleialkaLekisislsvdk..reellkvartslnsklssresellsklvvdAvkiieeea..eldvgnigvikieggsledselieGvvldkgylspdmpkrlenpkillldcsleteke.tktkvvlkdaeelekleeaeekqllpllekivesgvnlviiakgiddealhfLakngilalrrvkkedlerlakltgatavsrlesleeedlGkakkveeeeige..dkttliegestlsgkvatillrgateveldeleraiedalravkaalkdegvvpGGGaaelelskkLreeakslsgkeqlgieifakAleaipktLaeNagldpkevlaklkaah..kkgenlgidaetgeiidlveagilDplkvkrsalksavevasliLtidqiika 486
                  +++i++t+LGPkG++kmlvn+ g+++i+ndgatil ++e++h+va+llve+++sqd+e+GDGtt +v+Lag+Lle+aekl+++g+hp++i++g++ a++ia++ L++is  ++ d+  +  ll+ a+t l+sk+++ +++++++++v+Av+++ + +  ++++++i+ +  +gg+l ++eli+G+v+dk++ +p+mpk++ ++k ++l c++e +k+ tk+k +++++e ++kl ++e++++ ++++++++sg+nlvi+++g+ddea+h+L +n++ a+r+v   +le +a++tg+++v r+++l++e+lG+a++v+e  +g+  ++++++e  ++ +++++t+l+rg ++++++e++r+++da+++v++++k++++v+GGGaae+++s+++ ++a +++g +q+++++fa+Ale ip  LaeN+gl+p+  l+ +k+++  +++ +lgid+++    d++e+ +++ l  k++ l  a++v+++iL+id++i++
  MMETSP1325-20131115|13643_1  23 VSNILRTSLGPKGMDKMLVNSDGQVTISNDGATILDKMEVEHQVARLLVELSQSQDNEIGDGTTGVVVLAGALLEQAEKLLDRGFHPVRISEGFDQACDIAVQTLSDISDVVEFDQqnTTPLLNTAKTTLSSKIINVHRDKMAEIAVEAVLAVADFEhhDVNFDMIKMEGKPGGQLGETELIKGIVIDKDFSHPQMPKEVVDAKMCILTCPFEPPKPkTKHKLDITSKEAYDKLHQQEQEYFTEMVKQCKDSGANLVICQWGFDDEANHLLLQNELPAVRWVGGVELELIAIATGGRIVPRFSELSPEKLGSAGRVREVAFGTlkERMLVVE--DCANSNAVTVLVRGGNSMIVEEAKRSLHDAMCVVRNLIKNNRIVYGGGAAEIACSNAITAQADEKTGVDQYALRAFADALEDIPMALAENSGLSPITQLSAVKSRQvtEGNPYLGIDCKRAGTNDMKEQLVFETLIGKQQQLLLATQVVKMILKIDDVIMH 515
                  689*****************999**********************************************************************************999988888855789******************************5555444599****************888**************************************9*****************************************************************************************99*************98799999**..********************************************************************************************************76535555***********************************************97 PP

>> PF07930.7  D-aminopeptidase, domain B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   7.8e-06     0.053      33      85 ..     335     388 ..     325     390 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.8e-06
    PF07930.7  33 ggrmk.arfgtspekmdvvsenearsavttlrrdgetielvrkdenlrlamkrl 85 
                   gr++   fgt  e+m vv +     avt l r g+ + +  ++  l+ am  +
  MMETSP1325-20131115|13643_1 335 AGRVReVAFGTLKERMLVVEDCANSNAVTVLVRGGNSMIVEEAKRSLHDAMCVV 388
                  35654257************999999***********99999999999999655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       561  (0.0410328); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.36s 00:00:01.25 Elapsed: 00:00:00.59
# Mc/sec: 2107.98
//
Query:       MMETSP1325-20131115|13659_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       244  (0.0178467); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.55
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|13666_1  [L=199]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.052   12.9   2.7      0.093   12.1   1.8    1.5  1  PF13687.1  Domain of unknown function (DUF4153)
        2.2    7.7   8.9        6.1    6.2   6.0    1.6  1  PF01027.15 Inhibitor of apoptosis-promoting Bax1
        3.7    7.5   9.2        2.1    8.2   2.1    2.1  2  PF00892.15 EamA-like transporter family


Domain annotation for each model (and alignments):
>> PF13687.1  Domain of unknown function (DUF4153)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.8     2e-05     0.093      74     143 ..      29     110 ..      26     168 .. 0.74

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2e-05
    PF13687.1  74 ylliLylYaakilitwelp..kGlvs........wlvlfl.llllllilfllytsekkwlklf.lrilpllllpllvllfya 143
                  +++ Lyl a   l  w++p  +G+ s        +l+l++ + +l+l+l++ + +++ +  ++ ++ l+lll p+l+l + +
  MMETSP1325-20131115|13666_1  29 VAAALYLCATEALSPWKWPifDGQNSagerccllLLALAYgATVLVLFLIVDWSDRSDVRAWYaMSALLLLLSPVLCLFLKG 110
                  57889****************8888888898865555555433444444444556666655554788889999999998765 PP

>> PF01027.15  Inhibitor of apoptosis-promoting Bax1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.0    0.0013       6.1      10     111 ..      63     163 ..      58     167 .. 0.51

  Alignments for each domain:
  == domain 1    score: 6.2 bits;  conditional E-value: 0.0013
   PF01027.15  10 llalgllltaavavvvlsss..lflslflvlflvlllaplalliflallasrlrkysanla.llllllytlleGltlgpillvytgsivlqafllTaavfgglsl 111
                  llal+ + t++v ++++  s  + ++   +  + +ll+ l  + + ++l     + +  ++ +l+ +++ +++ ++l+++ ++ +g+i+  a+++  +  ++l l
  MMETSP1325-20131115|13666_1  63 LLALAYGATVLVLFLIVDWSdrSDVRA--WYAMSALLLLLSPVLC-LFLK-GEGSRPGLTKpQLATTFFLGVVTFSLAAVHQFQDGTIASAALVGAYLSSAALVL 163
                  444444455444444433333322222..2222233333444423.3333.344445556779999999999999999999998755555555544443333333 PP

>> PF00892.15  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.3     0.024   1.1e+02      18      72 ..      25      77 ..      15      80 .. 0.63
   2 ?    8.2   2.1   0.00046       2.1      32      93 ..      98     162 ..      85     166 .. 0.74

  Alignments for each domain:
  == domain 1    score: 2.7 bits;  conditional E-value: 0.024
   PF00892.15 18 spltitayrlliagillilllfllrepialislkdilallllgllgtvlgyllff 72
                 +p++++a  +l a+  ++  + ++  +  + s ++  +llll+l +++   +lf+
  MMETSP1325-20131115|13666_1 25 DPWMVAAALYLCAT-EALSPWKWPIFD-GQNSAGERCCLLLLALAYGATVLVLFL 77
                 67777777777777.333333344443.456666777777777777766666665 PP

  == domain 2    score: 8.2 bits;  conditional E-value: 0.00046
   PF00892.15  32 i..llilllfllrep.ialislkdilallllgllgtvlgyllffyalkktsasnaslitslePvf 93 
                  +  + +l lfl++e+  + +++ +++  ++lg++++ l+ + +f+  +  sa+ ++ ++s + ++
  MMETSP1325-20131115|13666_1  98 LllSPVLCLFLKGEGsRPGLTKPQLATTFFLGVVTFSLAAVHQFQDGTIASAALVGAYLSSAALV 162
                  221234444444444889**************************999999999999988876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       525  (0.0383996); expected 273.4 (0.02)
Passed bias filter:                      343  (0.0250878); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.40s 00:00:00.92 Elapsed: 00:00:00.55
# Mc/sec: 867.05
//
Query:       MMETSP1325-20131115|13672_1  [L=37]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (37 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       164  (0.0119953); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 173.85
//
Query:       MMETSP1325-20131115|13665_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-14   53.3   0.1    3.6e-14   52.8   0.0    1.2  1  PF08241.7  Methyltransferase domain
    1.9e-09   37.1   0.0    2.2e-09   36.9   0.0    1.1  1  PF13847.1  Methyltransferase domain
    1.5e-07   31.1   0.0      2e-07   30.6   0.0    1.2  1  PF13489.1  Methyltransferase domain
    7.1e-07   29.6   0.0    9.6e-07   29.2   0.0    1.2  1  PF12847.2  Methyltransferase domain
    1.6e-05   25.1   0.0    2.5e-05   24.5   0.0    1.3  1  PF08242.7  Methyltransferase domain
    0.00016   20.7   0.1    0.00022   20.2   0.1    1.2  1  PF01209.13 ubiE/COQ5 methyltransferase family
    0.00024   21.3   0.1    0.00041   20.5   0.0    1.4  1  PF13649.1  Methyltransferase domain
  ------ inclusion threshold ------
      0.023   14.0   0.0       0.34   10.2   0.0    2.1  2  PF01555.13 DNA methylase
       0.04   12.8   0.0      0.051   12.5   0.0    1.1  1  PF02353.15 Mycolic acid cyclopropane synthetase
      0.056   13.8   0.0       0.39   11.1   0.0    2.1  2  PF14226.1  non-haem dioxygenase in morphine synthesis N-terminal


Domain annotation for each model (and alignments):
>> PF08241.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   2.7e-17   3.6e-14       2      95 .]      46     147 ..      45     147 .. 0.94

  Alignments for each domain:
  == domain 1    score: 52.8 bits;  conditional E-value: 2.7e-17
    PF08241.7   2 dvGcGtglllealaerpaarvtgvDlseemlatakerlkeegle.lvvadaeelpfednsfDvvvssevlehl.......edpekalkeiaRvLkpgGllvi 95 
                   +G+G+ +l+e + e    ++t++D+s  +++++ +r+k++    ++++++++l f+d+sfD+v++  ++  +       ++++k+ +e+ RvLk +G+++i
  MMETSP1325-20131115|13665_1  46 MAGAGNSRLSEDMYEDGYQTITNIDISRVVVDQMIDRYKDKAALtYQQMNVCSLEFPDESFDAVTAKGTMDAIlcgegstANVAKMCQEVSRVLKAHGVFFI 147
                  589*************99***********9999988888876657*************************9999*************************997 PP

>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   1.6e-12   2.2e-09       2     124 ..      39     163 ..      38     200 .. 0.82

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 1.6e-12
    PF13847.1   2 ksgikvlDlGCGtGylllelaeelgpgak.vvGiDiseeaielAkeraqklgfenveFiqgdieeleklle.esfDlvisnevl.......naladpqkvlkeiervlkpggrlivespsllaelpeeleel 124
                  k++ ++l +G+G+ +l+  ++e    g + ++ iDis   +  +  r +  +   ++++q ++ +le  ++ esfD v++++++          a+ +k+ +e++rvlk +g+++++s  + ++  + le++
  MMETSP1325-20131115|13665_1  39 KKDDTILMAGAGNSRLSEDMYED---GYQtITNIDISRVVVDQMIDRYK-DKA-ALTYQQMNVCSLE--FPdESFDAVTAKGTMdailcgeGSTANVAKMCQEVSRVLKAHGVFFIVSYGVPDNRLQYLENE 163
                  67889999*************53...3345****************744.333.49***********..************99999999988889999999***************9998555555555544 PP

>> PF13489.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   1.5e-10     2e-07       3     129 ..      24     162 ..      22     182 .. 0.81

  Alignments for each domain:
  == domain 1    score: 30.6 bits;  conditional E-value: 1.5e-10
    PF13489.1   3 rqrereladllerllarlkpggrvLDiGcGtGillellaengf.dvtgvDpspaaigk...akqaqksqfdeed....aaepagkfdlivarevlehvp.......dpeellrqiaellkpgGylllstpnaslasdeafak 129
                  +qr+  l++ll++ +   k++ ++L  G+G+ +l+e + e g+  +t++D+s++ +     +++ +   ++++      ++p+++fd ++a  ++  +        +++++ +++ + lk  G+++++ + +++ + + +++
  MMETSP1325-20131115|13665_1  24 YQRYSGLSELLNKYV---KKDDTILMAGAGNSRLSEDMYEDGYqTITNIDISRVVVDQmidRYKDKAALTYQQMnvcsLEFPDESFDAVTAKGTMDAILcgegstaNVAKMCQEVSRVLKAHGVFFIVSYGVPDNRLQYLEN 162
                  566666777777776...899**********************5599*******999999955555555555545666999*********9999999998888877899*******************99876444444443 PP

>> PF12847.2  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0     7e-10   9.6e-07       2     111 ..      41     149 ..      40     150 .. 0.78

  Alignments for each domain:
  == domain 1    score: 29.2 bits;  conditional E-value: 7e-10
    PF12847.2   2 gkrilDlGcGtGslslelarlrpgak.vvgvDpseeslelarenaksldleeriellqgdakeelsller.fDavllkg.l....tldallal....deprrvlealpkllkpggrlvies 111
                  +++il  G+G+ +ls  + +   g + ++ +D+s+  ++++ ++    +    ++++q ++   l++ ++ fDav++kg +    +            ++ ++++++ + lk +g+++i s
  MMETSP1325-20131115|13665_1  41 DDTILMAGAGNSRLSEDMYE--DGYQtITNIDISRVVVDQMIDRY---KDKAALTYQQMNV-CSLEFPDEsFDAVTAKGtMdailC------GegstANVAKMCQEVSRVLKAHGVFFIVS 149
                  678999**************..67777******************...4557888999888.444555445888888884444443......34444557788*************99976 PP

>> PF08242.7  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   1.8e-08   2.5e-05       3      99 .]      47     145 ..      45     145 .. 0.86

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 1.8e-08
    PF08242.7   3 iGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl.......kdirevldnirklLkpgGvl 99 
                   G+G+++l++ + e+    ++t +Dis+ ++++   + +++ +   +++n+  l+  d    +sfD+v+a +++ ++       +++ ++ +++ ++Lk  Gv+
  MMETSP1325-20131115|13665_1  47 AGAGNSRLSEDMYED-GYQTITNIDISRVVVDQMIDRYKDKAALTYQQMNVCSLEFPD----ESFDAVTAKGTMDAIlcgegstANVAKMCQEVSRVLKAHGVF 145
                  69**********999.888899*********777777777776666666666666554....5*************************************9985 PP

>> PF01209.13  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   1.6e-07   0.00022      64     169 ..      53     165 ..      35     174 .. 0.79

  Alignments for each domain:
  == domain 1    score: 20.2 bits;  conditional E-value: 1.6e-07
   PF01209.13  64 klsdsvgekg..kvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfDvvt.......vsfGlrnvtDklkaLkeayrvlkpGGrlvvlefskvelpllsqayely 169
                  +ls+ + e g  +++ +Di+  ++++  ++ k+++   + + q n   L+f d+sfD vt       +  G   +++  k  +e+ rvlk+ G ++++ +  + + l     e y
  MMETSP1325-20131115|13665_1  53 RLSEDMYEDGyqTITNIDISRVVVDQMIDRYKDKAA--LTYQQMNVCSLEFPDESFDAVTakgtmdaILCGEGSTANVAKMCQEVSRVLKAHGVFFIVSYGVPDNRLQYLENEDY 165
                  56666666666689999***9999999999999875..7899*****************944444444567788999*******************9998887776655555555 PP

>> PF13649.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0     3e-07   0.00041       1     101 []      44     143 ..      44     143 .. 0.83

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 3e-07
    PF13649.1   1 ildlGCGsGrviraltraldkgpeqrvigvDiseealelakerlsskglkvkfvqadaralpfeegefdlvvcaglsle.....hlspkqlealleeiarvlkpgG 101
                  il +G G+ r  + +++    g  q ++ +Dis   +++   r+++k +  ++ q+ + +l+f++++fd+v+  g  ++       s     ++++e++rvlk +G
  MMETSP1325-20131115|13665_1  44 ILMAGAGNSRLSEDMYED---GY-QTITNIDISRVVVDQMIDRYKDK-AALTYQQMNVCSLEFPDESFDAVTAKGT-MDailcgEGSTANVAKMCQEVSRVLKAHG 143
                  566788887777777755...65.9*******************766.5************************554.66555555688888999999999999887 PP

>> PF01555.13  DNA methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.097   1.3e+02      19      59 ..      11      51 ..       4     107 .. 0.67
   2 ?   10.2   0.0   0.00025      0.34      37     112 ..     130     203 ..     120     206 .. 0.80

  Alignments for each domain:
  == domain 1    score: 1.7 bits;  conditional E-value: 0.097
                 .....GGGT-SS----HHHHHHHHHHHB-----EEE----- CS
   PF01555.13 19 deqyeeedsyeeyleflekvlkevrrvLkddgsifinidds 59
                 de y +  +  ++ ++  +  +++ +  k+d++i++    +
  MMETSP1325-20131115|13665_1 11 DERYTKDPEPFDWYQRYSGLSELLNKYVKKDDTILMAGAGN 51
                 55666666667788888888888888888888877665444 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00025
                  HHHHHHHHHB-----EEE---------HHHHHHHHH--.-EEEEEEEEE---.----SS..S----EEEEEEEESST CS
   PF01555.13  37 kvlkevrrvLkddgsifiniddseikkelkaladeifggffllnvivwkkpn.smpesnkdrltsthEyilvfsknk 112
                  k+++ev rvLk  g++fi       +  ++  +++++   +  +v +  kp  s ++  + +  ++  yi+v++k++
  MMETSP1325-20131115|13665_1 130 KMCQEVSRVLKAHGVFFIVSYGVPDN--RLQYLENEDY-SWTVSVHTVPKPTvSATAVPDTKDANSVHYIYVCQKGG 203
                  7789***************9999998..6777777766.67777777777755777777677788888999999986 PP

>> PF02353.15  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.7e-05     0.051      60     184 ..      38     167 ..      25     180 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 3.7e-05
                  -----EEEE-------HHHHHHHHH--EEE--BS-HHHHHHHHHHHHCS-SSS-B---B---TT-----SEEEE---GGGT.....--TCHHHHHHHHHHCS-----EEEEEEE---HHHHCC----THH CS
   PF02353.15  60 lkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakqrvdeldlerkvevklldyedldekvdrvvsvgafehv.....gkenydtffkklkkllkedGllllhtitslhkkelaerglklkf 184
                  +k+ +t+L  G+G   l   + e     +  + +S+    ++ +r ++      ++++++  e  de +d+v + g ++++      ++n ++ +++++++lk+ G++ + +   ++++ +  ++ + ++
  MMETSP1325-20131115|13665_1  38 VKKDDTILMAGAGNSRLSEDMYEDGYQTITNIDISRVVVDQMIDRYKDKAALTYQQMNVCSLEFPDESFDAVTAKGTMDAIlcgegSTANVAKMCQEVSRVLKAHGVFFIVSYGVPDNRLQYLENEDYSW 167
                  6777888999999999999998886677888999999999999999999999999999999998899**************999977899**********************999999988777766666 PP

>> PF14226.1  non-haem dioxygenase in morphine synthesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.72   9.8e+02      26      58 ..      60      92 ..      52     114 .. 0.79
   2 ?   11.1   0.0   0.00029      0.39      10      44 ..     125     159 ..     115     163 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.1 bits;  conditional E-value: 0.72
    PF14226.1 26 evGffqvvnhgvpeelieevfeaarefFalple 58
                 e G   ++n +++  +++++ +  ++  al  +
  MMETSP1325-20131115|13665_1 60 EDGYQTITNIDISRVVVDQMIDRYKDKAALTYQ 92
                 567778999999999999999988877766655 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.00029
    PF14226.1  10 sedreevakelreAceevGffqvvnhgvpeeliee 44 
                   ++ +++++e+ + ++ +G+f +v  gvp++ ++ 
  MMETSP1325-20131115|13665_1 125 TANVAKMCQEVSRVLKAHGVFFIVSYGVPDNRLQY 159
                  4677899**********************988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       537  (0.0392774); expected 273.4 (0.02)
Passed bias filter:                      470  (0.0343768); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.48u 0.40s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 996.88
//
Query:       MMETSP1325-20131115|13674_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 436.98
//
Query:       MMETSP1325-20131115|13679_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-11   43.1   0.0    3.1e-11   42.9   0.0    1.1  1  PF00102.22 Protein-tyrosine phosphatase


Domain annotation for each model (and alignments):
>> PF00102.22  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   2.3e-15   3.1e-11       2      88 ..      33     128 .]      32     128 .] 0.85

  Alignments for each domain:
  == domain 1    score: 42.9 bits;  conditional E-value: 2.3e-15
                  GGG-SSTT--B-GCCEEE-TSTTS.TSEEEEEEE.......EECG.CTCEEEEE---T......GGGHHHHHHHHHHTT--EEEEESBSBS--SBSS---S CS
   PF00102.22   2 kkknrykdilpydktrvklkgsegpsdYInAnyv.......kgyk.kkkkfIatQgPl......kstvedFWrmvwqekvkvivmltsleekgrekcaqYw 88 
                   +  ry++++  d tr  +    ++ ++ nAn+v       + +k  +   I++QgP+      ++t+  FW mv ++ v+++v l+s+e  g + ca+Yw
  MMETSP1325-20131115|13679_1  33 AQLARYSNVVGWDATRTVV----STGEWQNANHVcvrgltsRPTKaDEMCAIISQGPMhpdyhgPDTIPAFWSMVHEHSVSTVVALASVE-PGFRGCARYW 128
                  6778***************....333488*****99888653333248999******99999999**********************965.589******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 639.03
//
Query:       MMETSP1325-20131115|13680_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       124  (0.00906963); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 405.91
//
Query:       MMETSP1325-20131115|13684_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 244.33
//
Query:       MMETSP1325-20131115|13685_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-14   52.5   1.8    4.5e-14   52.4   1.3    1.0  1  PF13517.1  Family description
    1.4e-10   40.4   5.5    8.2e-06   25.2   1.1    2.2  2  PF01839.18 FG-GAP repeat
     0.0051   16.1   2.9       0.24   10.6   0.0    2.0  2  PF12256.3  Insecticide toxin TcdB middle/N-terminal region


Domain annotation for each model (and alignments):
>> PF13517.1  Family description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   1.3   9.9e-18   4.5e-14       1      61 []       3      66 ..       3      66 .. 0.86

  Alignments for each domain:
  == domain 1    score: 52.4 bits;  conditional E-value: 9.9e-18
    PF13517.1  1 DldgDGdlDlvvag.dgglrlylnng.dGtftdvaetslgag.gggtgvafgDldgDGdlDllv 61
                 Dl+ DG++D+v+++ +   ++yln+g +G+ t++ et+l+ + ++  ++++gD+dgDGdlDll+
  MMETSP1325-20131115|13685_1  3 DLNADGLPDMVLTDkSTYAWVYLNTGsSGSPTWTLETELAKNvYNFQSPTLGDVDGDGDLDLLI 66
                 9************96789*******96677777777888888455559**************86 PP

>> PF01839.18  FG-GAP repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   5.4e-07    0.0024       8      34 .]       2      24 ..       1      32 [. 0.84
   2 !   25.2   1.1   1.8e-09   8.2e-06       4      21 ..      50      67 ..      49      69 .] 0.91

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 5.4e-07
                 E-TT---S-EEEEETEECTCE--EEEE CS
   PF01839.18  8 gDfnGDGrpDlavGpmggghnGavyvy 34
                 gD+n DG+pD ++     + +  ++vy
  MMETSP1325-20131115|13685_1  2 GDLNADGLPDMVL----TDKSTYAWVY 24
                 9************....7777666666 PP

  == domain 2    score: 25.2 bits;  conditional E-value: 1.8e-09
                 CEEEE-TT---S-EEEEE CS
   PF01839.18  4 svavgDfnGDGrpDlavG 21
                 s+++gD++GDG+ Dl++G
  MMETSP1325-20131115|13685_1 50 SPTLGDVDGDGDLDLLIG 67
                 899**************6 PP

>> PF12256.3  Insecticide toxin TcdB middle/N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   5.4e-05      0.24      30      61 ..       2      28 ..       1      45 [. 0.72
   2 !    7.1   0.5   0.00065         3      24      42 ..      48      66 ..      26      69 .] 0.71

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 5.4e-05
    PF12256.3 30 aDinGdGladlvlsvphikekaprhwrldfet 61
                  D+n+dGl d+vl+ +++     + w++  ++
  MMETSP1325-20131115|13685_1  2 GDLNADGLPDMVLTDKST-----YAWVYLNTG 28
                 6************88877.....556654444 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.00065
    PF12256.3 24 tcqlslaDinGdGladlvl 42
                 + + +l D++GdG +dl++
  MMETSP1325-20131115|13685_1 48 FQSPTLGDVDGDGDLDLLI 66
                 346689**********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 311.98
//
Query:       MMETSP1325-20131115|13694_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-14   52.3   0.0    3.2e-14   52.0   0.0    1.1  1  PF01423.17 LSM domain
    2.1e-05   24.7   0.0    2.7e-05   24.4   0.0    1.1  1  PF14438.1  SM domain found in Ataxin-2
  ------ inclusion threshold ------
      0.037   13.7   0.0      0.066   12.9   0.0    1.4  1  PF12701.2  Scd6-like Sm domain
       0.13   12.1   0.1       0.37   10.6   0.0    1.7  2  PF05187.8  Electron transfer flavoprotein-ubiquinone oxidoreductase


Domain annotation for each model (and alignments):
>> PF01423.17  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.0   9.5e-18   3.2e-14       2      67 ..      24      89 ..      23      90 .. 0.96

  Alignments for each domain:
  == domain 1    score: 52.0 bits;  conditional E-value: 9.5e-18
                 HHHHHTTS-EEEEETTTEEEE-EEEEEETTCEEEEEEEEEEE...EEE..EE.EEEEEGGGEEEEE CS
   PF01423.17  2 elqelinkrVtvelkngreveGtLkafDkfmNlvLrdvtetwkrkkknkrelgqiliRGenivlvs 67
                 + + li+k++ velkn+  + GtL+++D+++N+ L+dv+  + ++  + + +++++iRG+ i++v 
  MMETSP1325-20131115|13694_1 24 FFKTLIGKEIAVELKNDVALTGTLHSVDQYLNIKLTDVQVVDADRFPQLAAMKNCFIRGSVIRYVQ 89
                 78999******************************************99***************96 PP

>> PF14438.1  SM domain found in Ataxin-2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0     8e-09   2.7e-05       5      87 ..      23     109 ..      20     124 .. 0.75

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 8e-09
    PF14438.1   5 ylltnliGskveVtlknGsvyeGilhaaspestnfdvvLkaakvlkkedskg.......aksksivetliiqakdvvsieakdvdlssae 87 
                   ++ +liG+++ V+lkn+   +G lh++++    +++ L  ++v++ +   +         ++s++  ++i+a +v +  ++d+  ++ +
  MMETSP1325-20131115|13694_1  23 SFFKTLIGKEIAVELKNDVALTGTLHSVDQY---LNIKLTDVQVVDADRFPQlaamkncFIRGSVIRYVQIPAAEVDTELLQDAARQQTK 109
                  67899**************************...77777777777773333344555578888888889999999988878777777766 PP

>> PF12701.2  Scd6-like Sm domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.9e-05     0.066       6      49 ..      27      68 ..      23     110 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.9e-05
                 ------EEEEETTTEEEE-EEEEEETTTTEEEEEEEEE---TTT CS
    PF12701.2  6 syiGskisliSksdirYeGilssinteestialqnvrsfGtegr 49
                  +iG+ i++  k+d+   G+l+s+++   +i l++v +    +r
  MMETSP1325-20131115|13694_1 27 TLIGKEIAVELKNDVALTGTLHSVDQ-YLNIKLTDVQVVDA-DR 68
                 68**********************87.88899999888776.33 PP

>> PF05187.8  Electron transfer flavoprotein-ubiquinone oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00011      0.37      53      98 ..      34      79 ..      29      91 .. 0.82
   2 ?   -0.4   0.0       0.3     1e+03      23      47 ..      89     113 ..      72     121 .. 0.69

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00011
    PF05187.8 53 sfdklssvflsntnHeedqpvHLklkdaevpikvnlekydepeqry 98
                 + +  ++v+l++t H  dq   +kl+d +v  +  +++ +++++ +
  MMETSP1325-20131115|13694_1 34 AVELKNDVALTGTLHSVDQYLNIKLTDVQVVDADRFPQLAAMKNCF 79
                 5566789**********************99999888888777666 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.3
    PF05187.8  23 tlkekkpDaaalkkakeakkieypk 47 
                  ++   + D++ l++a++ + ++ p 
  MMETSP1325-20131115|13694_1  89 QIPAAEVDTELLQDAARQQTKDAPS 113
                  4556677888888888888777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       395  (0.0288912); expected 273.4 (0.02)
Passed bias filter:                      319  (0.0233324); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 661.60
//
Query:       MMETSP1325-20131115|13693_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|13686_1  [L=417]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-46  157.9   0.0    3.1e-46  157.5   0.0    1.2  1  PF00069.20 Protein kinase domain
    3.6e-18   65.5   0.0      5e-18   65.0   0.0    1.2  1  PF07714.12 Protein tyrosine kinase
     0.0007   19.2   0.3     0.0068   16.0   0.2    2.1  2  PF01636.18 Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.5   0.0   6.8e-50   3.1e-46       1     260 []     105     382 ..     105     382 .. 0.92

  Alignments for each domain:
  == domain 1    score: 157.5 bits;  conditional E-value: 6.8e-50
                  EEEEEEEE----EEEEEEEETTCCEEEEEEEEEGGGHHHHHHHHHHH..............HHHHHHHHH-TTB--EEEEEEE.....STEEEEEEE--SC-EHHHHHHHHCCB-HHHHHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEECEESS-CSS----GGGS-HHHHH.TSHHHHHHHHHHHHHHHHHHHHC---TTTSTHHHHHHHHHCCCHHTTS--GGGGCSHHH....HHHHHHHHHHT-SSGGGS--HHHHHTSGGH CS
   PF00069.20   1 yelleklGsGsfGkVykakkkktgkkvAvKilkkeeekskkektavr..............ElkilkklsHpnivkllevfee.....kdelylvleyveggdlfdllkkegklseeeikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkleksseklttlvgtreYmAPEvll.kakeytkkvDvWslGvilyelltgklpfsgeseedqleliekilkkkleedepksssks....eelkdlikkllekdpakRltaeeilkhpwl 260
                  ++++++lG+G++++Vy++ + + g +vA+K +   ++  +k++                  E + l+ ++Hp+++ l+++  +     +++ +lvle +++g+l+++++k g l+e  ++++a q+  gl  +H++ + HrD+KpeN+Ll ++ +l+iaDFGla     +++ +tt +gt+ Ym+PEv++ ++ ++ +++DvW++ ++++ l+ g++p+  +    +  ++++i++++ +  ++ +++      +e+k ++++ l++   +R+++e++l +p++
  MMETSP1325-20131115|13686_1 105 FRVGRQLGEGASASVYEGLDAEFGVRVALKLVGLTSKAATKARM--TpgaacssaataysnERNALQAVTHPHVLGLHACSDReshkgRRTSLLVLERCPNGELYNVMEKLGALDESVARTYAHQLWHGLGACHEQLVFHRDIKPENLLLAEDWSLRIADFGLAT--VGRRGLVTTTCGTSGYMSPEVYRpRGAHDPARADVWAATCVTFILAMGSPPITAA--CPKCWFFRQIQNNRFDLFWKAHEKFGprlsDEFKAFLQRGLNPIMLARPSVESMLADPLF 382
                  57899****************************99999988755..2458999**************************99999999888899***********************************************************************9..69*******************99678888999*********************99..677788888888776666665544338888*************************99976 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.0   1.1e-21     5e-18       3     220 ..     107     334 ..     105     379 .. 0.74

  Alignments for each domain:
  == domain 1    score: 65.0 bits;  conditional E-value: 1.1e-21
                  EEEEE-------EEEEEEET.......TTTSSEEEEEEEEE..CTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSS.....EEEEEE---B--HHHHHHHTGTTGSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSE..EEHHHHHHH---HHHHHHTTT-GTTTTS.HHHHHHHHHHT CS
   PF07714.12   3 lgkklGeGafGkVvegtlkg.......ekekkevkVavKtl..kesaeeeekeefleeakimkklkhpnivkllgvctkeep.....llivteyvkgGdLlefLrkkekekltlkdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekk..ftsksDvWsfGvllwEiftlgespypgl.sneevlellke 220
                  +g++lGeGa ++V+eg   +       +    + k a K       a +++ ++  +e ++++++ hp+++ l+++  +e++      l+v+e +++G+L+++++k    +l+ +    +a q+ +G+   +++ + Hrd+   N Ll+e+   +i+DfGLa       +    +++     +m+pE+ + +      ++DvW+  ++++ i+ +g+ p+     +  +++++++
  MMETSP1325-20131115|13686_1 107 VGRQLGEGASASVYEGLDAEfgvrvalKLVGLTSKAATKARmtPGAACSSAATAYSNERNALQAVTHPHVLGLHACSDRESHkgrrtSLLVLERCPNGELYNVMEKL--GALDESVARTYAHQLWHGLGACHEQLVFHRDIKPENLLLAEDWSLRIADFGLATVG----RRGLVTTTCGTSGYMSPEVYRPRGahDPARADVWAATCVTF-ILAMGSPPITAAcPKCWFFRQIQN 334
                  689*************99977777776444445555555442134555666889999****************999884443466779*****************98..9****************************************************988....3333445566779*******98883245789****988888.666688885554344444444433 PP

>> PF01636.18  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.0    0.0051        23       3     107 ..     109     237 ..     107     238 .. 0.78
   2 !   16.0   0.2   1.5e-06    0.0068     144     198 ..     212     269 ..     176     272 .. 0.69

  Alignments for each domain:
  == domain 1    score: 4.4 bits;  conditional E-value: 0.0051
                  EEEE--SSEEEEEEEETT...TEEEEE................ESSCCHHHHHHHHHHHHHHHCCSSSB--BEEE....E-CSSCSCEEEEEE---HHBCCT......CSHHHHHHHHHHHHHHHHHHHHH CS
   PF01636.18   3 relsgGasnrtyrvttga.g.ryvlrr................arparaaeelrrevallrlLakagipvPevla..gdtdddvlgllfalleyvpgevler......klnarqlpallealaellaalhq 107
                  r+l++Gas  +y+  + + g r++l++                a+ + aa   ++e   l+++   ++    ++a   ++++ ++++   +le++p   l++      +l+++ ++ ++ +l + l+a h+
  MMETSP1325-20131115|13686_1 109 RQLGEGASASVYEGLDAEfGvRVALKLvgltskaatkarmtpgAACSSAATAYSNERNALQAVTHPHV--LGLHAcsDRESHKGRRTSLLVLERCPNGELYNvmeklgALDESVARTYAHQLWHGLGACHE 237
                  8999************9999999999999999999999988775555668888899999988775545..4444400345555555599999999999999988888888888888888888888888885 PP

  == domain 2    score: 16.0 bits;  conditional E-value: 1.5e-06
                  HHHHHHHH.HHHHHHHHHHC..SS--EEB.-SS-SGGGEEEETTTTEEEE---TT-BBE CS
   PF01636.18 144 lleeleer.vlaalaallpg..aeppvll.HgDlhpgNllvdpddgrvgviDfedaglg 198
                   l++l+e  ++   ++l++g  a +++l+ H+D++p Nll+  +d+ + + Df++a++g
  MMETSP1325-20131115|13686_1 212 KLGALDESvARTYAHQLWHGlgACHEQLVfHRDIKPENLLLA-EDWSLRIADFGLATVG 269
                  345555552334456777779955555555************.889889********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       427  (0.0312317); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.35s 00:00:01.10 Elapsed: 00:00:00.50
# Mc/sec: 1998.56
//
Query:       MMETSP1325-20131115|13699_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.0   4.7       0.16   11.3   3.3    1.3  1  PF03299.9 Transcription factor AP-2
       0.83    8.9   5.3       0.12   11.7   0.2    1.9  2  PF13728.1 F plasmid transfer operon protein


Domain annotation for each model (and alignments):
>> PF03299.9  Transcription factor AP-2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.3   2.4e-05      0.16      41     140 ..      70     180 ..      65     192 .. 0.72

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 2.4e-05
    PF03299.9  41 SllggvlrraKsKnggrllrekLkkiglklpagrrkkanvt..lltalvEeE.A...vhlardlalvceeefpvk.....aiaeelarkaladdedldlrkellkkskkvv 140
                   l++++l +aK+Kn  r ++++ + + l  +  +r+ka++   +  +++E+  A   +  ++ l++  e+e+  +     ++++  ++++l++++ +  ++++ +k +kv 
  MMETSP1325-20131115|13699_1  70 CLIAANLYKAKNKNKYRAMKQVQDAYSLMARFVARRKAKIEarKQGSILEQMkAfgtTMSTKALHFDAEKEYNERxkraaQLGHGELKQKLEEEKRMREEQRMREKHNKVH 180
                  58999**************************99999887751156688886322221344688899999999754211114555556667777777777778877777764 PP

>> PF13728.1  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   1.8e-05      0.12      77     144 ..      50     120 ..      43     136 .. 0.79
   2 ?   -0.7   0.6      0.11   7.5e+02      13      47 ..     143     183 ..     131     192 .. 0.46

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.8e-05
    PF13728.1  77 wqrvllqnPeLdynlrrpvsnaarqalleqkkqkkekalkklakeyGlf..ffyrsdcpyc.ealapilqa 144
                   + vl  nP ++y+ +   + + + +l+++k+++k +a+k++++ y+l+  f+ r + ++  +++  il++
  MMETSP1325-20131115|13699_1  50 IASVLEINPAFNYSFQEILTCLIAANLYKAKNKNKYRAMKQVQDAYSLMarFVARRKAKIEaRKQGSILEQ 120
                  5678889*****************************************93333444444431444555555 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.11
    PF13728.1  13 ekekkpap...aapkqepsateql...eelrkeleelkakA 47 
                  e+ k  a+    + kq++++++++   + +r++++++  +A
  MMETSP1325-20131115|13699_1 143 ERXKRAAQlghGELKQKLEEEKRMreeQRMREKHNKVHSAA 183
                  33333333333222333333333311144555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1312  (0.0959626); expected 273.4 (0.02)
Passed bias filter:                      575  (0.0420568); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.43s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 868.68
//
Query:       MMETSP1325-20131115|13704_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       347  (0.0253803); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 616.93
//
Query:       MMETSP1325-20131115|13709_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.003   17.1   0.4     0.0041   16.7   0.2    1.3  1  PF00312.17 Ribosomal protein S15
  ------ inclusion threshold ------
      0.056   13.5   0.7      0.087   12.9   0.5    1.4  1  PF08227.6  DASH complex subunit Hsk3 like


Domain annotation for each model (and alignments):
>> PF00312.17  Ribosomal protein S15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.2   6.1e-07    0.0041      24      53 ..       5      34 ..       3      48 .. 0.88

  Alignments for each domain:
  == domain 1    score: 16.7 bits;  conditional E-value: 6.1e-07
   PF00312.17 24 valLterivrLrkHleehkkDysskrgLik 53
                 +a+L ++ivrL+ Hl++ ++D +s+ + + 
  MMETSP1325-20131115|13709_1  5 LAHLHQQIVRLEMHLKHVERDMQSTAQVLL 34
                 689*********************977654 PP

>> PF08227.6  DASH complex subunit Hsk3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.5   1.3e-05     0.087       4      42 ..       5      42 ..       4      45 .. 0.90

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.3e-05
    PF08227.6  4 ysqLasqLaqLqaNLadteelLettsiQaesirkLGkvh 42
                 +++L++q+  L  +L + e  ++ t+ Q  +i++L+ v+
  MMETSP1325-20131115|13709_1  5 LAHLHQQIVRLEMHLKHVERDMQSTA-QVLLIKRLAEVQ 42
                 79*********************997.899999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       624  (0.0456407); expected 273.4 (0.02)
Passed bias filter:                      442  (0.0323288); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 312.38
//
Query:       MMETSP1325-20131115|13710_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                       90  (0.0065828); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 442.40
//
Query:       MMETSP1325-20131115|13707_1  [L=263]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0064   16.2   0.0     0.0099   15.6   0.0    1.3  1  PF13180.1 PDZ domain
  ------ inclusion threshold ------
      0.015   14.8   1.4      0.065   12.7   1.0    1.9  1  PF06791.8 Prophage tail length tape measure protein


Domain annotation for each model (and alignments):
>> PF13180.1  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.5e-06    0.0099       3      69 ..     192     257 ..     190     263 .] 0.92

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 1.5e-06
    PF13180.1   3 iGvsvsqlentrgvlvvsVkessPaakaglkpGDiilkvdgkkvksltdlkslllkkkpGdtvkltv 69 
                  +G ++++ ++ + +lv + +e+  aa  g+k  D ++ v++ +v  +t+ + l++k+     +++t+
  MMETSP1325-20131115|13707_1 192 LGLTFKDSTD-GSILVETTTEKEAAAFIGVKCEDAVVGVNNATVPEGTKARDLVRKMPMERPISITF 257
                  89*******8.9999999*********************************9999999999999987 PP

>> PF06791.8  Prophage tail length tape measure protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.0   9.5e-06     0.065     111     171 ..      17      78 ..      12     100 .. 0.64

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 9.5e-06
    PF06791.8 111 aaGvtasqLadmarkisa..vggtqgaaaealtaLaaaGkvageqleavaqaaakmeeatgqs 171
                  a Gvta++La+ ar+++     +  g+a ++l++L +a + +    e++a+aaa + + +g+ 
  MMETSP1325-20131115|13707_1  17 AGGVTAEELATTARRVATqgKSTVCGTALKVLDKLYNAWRCGV-TAEELATAAAAVVRNSGKR 78 
                  67**************99644455699********88755433.3344444444444444543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       490  (0.0358397); expected 273.4 (0.02)
Passed bias filter:                      397  (0.0290374); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 1260.48
//
Query:       MMETSP1325-20131115|13712_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.38s 00:00:00.66 Elapsed: 00:00:00.49
# Mc/sec: 254.31
//
Query:       MMETSP1325-20131115|13713_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.024   14.2   0.2      0.049   13.2   0.1    1.5  1  PF10905.3  Protein of unknown function (DUF2695)
      0.049   13.9   0.4      0.087   13.1   0.3    1.4  1  PF00653.16 Inhibitor of Apoptosis domain
      0.069   12.7   0.0       0.13   11.9   0.0    1.5  1  PF10849.3  Protein of unknown function (DUF2654)


Domain annotation for each model (and alignments):
>> PF10905.3  Protein of unknown function (DUF2695)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   1.1e-05     0.049      26      51 ..      13      38 ..       9      39 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 1.1e-05
    PF10905.3 26 kqrsldaedlleaLgenGgfCDCEvv 51
                 ++++ d++++le L+  + +CD Evv
  MMETSP1325-20131115|13713_1 13 AEMRSDRKEVLEDLNTSCFVCDIEVV 38
                 568889******************98 PP

>> PF00653.16  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.3   1.9e-05     0.087      35      63 ..      26      54 ..      13      59 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.9e-05
   PF00653.16 35 dnvrCfyCkleldgweeeddpleeHlkhs 63
                  n+ Cf+C+ e+ ++e+ ++ ++eH + +
  MMETSP1325-20131115|13713_1 26 LNTSCFVCDIEVVDFEQANHDFQEHIENE 54
                 5899*********************8765 PP

>> PF10849.3  Protein of unknown function (DUF2654)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.8e-05      0.13      11      58 ..      70     117 ..      64     129 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.8e-05
    PF10849.3  11 knkrEikRLkkhAeealienNkeqYvYAIkKlRdilkQplndelletl 58 
                  k+ +E k L+ h    l++ Nk++    IkK R i     ++ +l tl
  MMETSP1325-20131115|13713_1  70 KDPKEYKGLELHVAPMLLDYNKAARCMPIKKARAINGNVKDKATLPTL 117
                  7889*******************************9988888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      385  (0.0281597); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.57
# Mc/sec: 723.04
//
Query:       MMETSP1325-20131115|13720_1  [L=248]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-22   79.0   0.0    1.1e-15   57.2   0.0    2.2  2  PF02252.13 Proteasome activator pa28 beta subunit
      0.007   16.2   0.5      0.007   16.2   0.4    1.7  2  PF13801.1  Heavy-metal resistance


Domain annotation for each model (and alignments):
>> PF02252.13  Proteasome activator pa28 beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2   0.0   1.7e-19   1.1e-15       7      94 ..      62     149 ..      58     172 .. 0.91
   2 !   19.9   0.0   5.3e-08   0.00036      93     146 ..     189     242 ..     177     248 .] 0.85

  Alignments for each domain:
  == domain 1    score: 57.2 bits;  conditional E-value: 1.7e-19
   PF02252.13   7 snekivellekvkpeiselieklnlvklwiqlqiPrieDGnnFGvsiqEevleeltavetkaealldqiskYyseRgklvakvakeph 94 
                   n+++ +l++++ +e+   + +++++++w++l +P ieDGnnFGv+i  e+ + ++  ++++e+l+ ++  Yy+eRg + a +a ++ 
  MMETSP1325-20131115|13720_1  62 NNATVGALMSTTTSELFFATSAMSVLETWLKLCVPAIEDGNNFGVGIVMEAAKMVKDAREELEKLQASVPDYYKERGAAYAAIAPKTT 149
                  6888999999999******************************************************************999986665 PP

  == domain 2    score: 19.9 bits;  conditional E-value: 5.3e-08
   PF02252.13  93 phveDyreavrelDekeyielrlvvleirnayavlydlilknlekikkPrsenk 146
                  p   D  + v  lD   y++l  ++  +r+ ya + d + kn eki+ P++++ 
  MMETSP1325-20131115|13720_1 189 PANPDQISHVVALDVMWYLKLCAACDRVRSLYAAICDFLEKNEEKIEAPKGSSS 242
                  5556777789999*************************************9865 PP

>> PF13801.1  Heavy-metal resistance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.4     1e-06     0.007      49      94 ..       8      53 ..       1      74 [. 0.83
   2 ?   -2.2   0.1      0.51   3.5e+03      72     103 ..     120     126 ..     111     145 .. 0.46

  Alignments for each domain:
  == domain 1    score: 16.2 bits;  conditional E-value: 1e-06
    PF13801.1 49 alraalrearrevralrralraarrellallraepfDpaalraala 94
                 ++ a+ +++  e++++ +a+ + + +l all+a p+D aal+a++a
  MMETSP1325-20131115|13720_1  8 IMDAIREKYNTEAANAKAAIPERFLKLDALLAANPPDVAALEAQFA 53
                 455555666689999999*************************997 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.51
    PF13801.1  72 rrellallraepfDpaalraalaeirearaal 103
                  r+el +                         l
  MMETSP1325-20131115|13720_1 120 REELEK-------------------------L 126
                  111111.........................1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       739  (0.0540521); expected 273.4 (0.02)
Passed bias filter:                      538  (0.0393505); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.40s 00:00:00.99 Elapsed: 00:00:00.71
# Mc/sec: 837.04
//
Query:       MMETSP1325-20131115|13722_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 350.90
//
Query:       MMETSP1325-20131115|13724_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.077   11.7   0.0      0.086   11.5   0.0    1.0  1  PF02378.13 Phosphotransferase system, EIIC


Domain annotation for each model (and alignments):
>> PF02378.13  Phosphotransferase system, EIIC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   6.3e-06     0.086       2      38 ..      28      66 ..      27      74 .. 0.71

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 6.3e-06
   PF02378.13  2 dgfmlpiplliaggillglgnlpn.adlkglss.lavvt 38
                 ++++l++++ +++g++l+l+ ++  +d +   s +++++
  MMETSP1325-20131115|13724_1 28 SAVILLVAVCLFAGFILILSRAGApEDETMQDSlQWWYK 66
                 689******************666555443222444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       611  (0.0446899); expected 273.4 (0.02)
Passed bias filter:                      553  (0.0404476); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.38s 00:00:00.76 Elapsed: 00:00:00.60
# Mc/sec: 395.40
//
Query:       MMETSP1325-20131115|13729_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      263  (0.0192364); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|13730_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       497  (0.0363517); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 465.18
//
Query:       MMETSP1325-20131115|13748_1  [L=179]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-27   96.4   0.0    1.7e-27   96.1   0.0    1.0  1  PF02181.18 Formin Homology 2 Domain


Domain annotation for each model (and alignments):
>> PF02181.18  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.1   0.0   1.2e-31   1.7e-27     201     352 ..       4     159 ..       2     168 .. 0.94

  Alignments for each domain:
  == domain 1    score: 96.1 bits;  conditional E-value: 1.2e-31
                  HHHHHHH---TTT-CCTTG------GGGGGGCCCSB-STTTSBHHHHHHHHHHTTSGGGGGHHHHTTTHHHCCTS-HHHHHHHHHHHHHHHHHHHHHHHCHHT....TSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---TT CS
   PF02181.18 201 lLeliLalGNymNggtrrgqAkGFkLdsLlkLsdvKstdnkttLLhfvvkiveeklpevldlsselsnvekaakvdleelekdvkklekglkklekeleksee....keeesdkfvekleefleeaeeklkkleeelkeakelfkelteYfgedpk 352
                  +L+l+L++GN +N+gt+r++ ++F L  L kL+ +K+ d+k tLL f+v  ++e++p+ ++ +  l+ ++ a  ++l+++e+ + + ++ l+ ++  +  + +    +++++d+fv+ +e+f e+a       e+ +k++k+ ++++t+Yfg + +
  MMETSP1325-20131115|13748_1   4 FLHLVLKVGNCLNEGTSRADFDAFDLRVLPKLAFIKTGDQKSTLLRFLVGFMDEHMPHAANWYTSLTALDAACVLSLDHIENLLTQCKRMLQTIKMVIVPVRNkkvyPNNDGDRFVSLMEPFHESALAIHSVAESRYKSTKRIYESTTDYFGVRAD 159
                  89*******************************************************************************999999999999999998887778899*******************************************87766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       360  (0.0263312); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.99
# Mc/sec: 433.28
//
Query:       MMETSP1325-20131115|13750_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.34s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 634.33
//
Query:       MMETSP1325-20131115|13751_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.7   7.7      0.086   12.5   5.3    1.1  1  PF02520.12 Domain of unknown function DUF148
       0.57    8.5   6.0       0.65    8.3   4.2    1.1  1  PF04425.7  Bul1 N terminus
       0.69    9.8   5.8       0.21   11.4   0.9    1.8  2  PF10130.4  PIN domain
        1.2    8.9  12.0        1.3    8.7   8.3    1.1  1  PF10454.4  Protein of unknown function (DUF2458)
        1.6    7.9   9.1        1.7    7.7   6.3    1.1  1  PF07418.6  Acidic phosphoprotein precursor PCEMA1
        2.2    7.7   9.4        2.5    7.5   6.5    1.0  1  PF08287.6  Spc19
        2.5    7.1   7.2        2.8    7.0   5.0    1.2  1  PF05929.6  Phage capsid scaffolding protein (GPO) serine peptidase
        4.8    7.5   9.2         11    6.3   6.4    1.7  1  PF14357.1  Domain of unknown function (DUF4404)
        5.2    7.2  11.0        4.8    7.3   1.5    2.0  2  PF12001.3  Domain of unknown function (DUF3496)
        5.4    6.2  18.6        6.2    6.0  12.9    1.0  1  PF09756.4  DDRGK domain
        6.1    6.4  11.2        1.7    8.2   0.7    2.0  2  PF11875.3  Domain of unknown function (DUF3395)
        6.8    6.5  12.0    1.2e+02    2.5   8.3    2.0  1  PF03245.8  Bacteriophage lysis protein
        7.8    6.1   6.7        8.8    5.9   4.7    1.0  1  PF01935.12 Domain of unknown function DUF87


Domain annotation for each model (and alignments):
>> PF02520.12  Domain of unknown function DUF148
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   5.3   8.2e-05     0.086       3      71 ..      10      83 ..       8      84 .] 0.83

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 8.2e-05
   PF02520.12  3 arqeffaIlknetltiaeieeqleaWaekyg.....vadqyeeFkkkvkakkeeleknvtavisnLssvdakls 71
                 +++ +++++++ +l ++  eeq + +++++      ++d++e+  ++  + +eele + ++  +++ + +++l+
  MMETSP1325-20131115|13751_1 10 EVEHYQKLVQERNLQQERWEEQRATLISTHEryiqeLTDDFEQKLEEDRKMHEELEDEKNENAKEFEEMKTQLE 83
                 5789****************************9455555555555555678999***********999999997 PP

>> PF04425.7  Bul1 N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   4.2   0.00062      0.65     366     434 ..       7      78 ..       2      83 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00062
    PF04425.7 366 ilkekeyfLRviPfgke...eyeksaeageeeakkllkdllklikekleageelekelekkeaiteediket 434
                  i++e e +  ++ + +      e+++ +  ++ + ++++l+++ ++kle+ +++ +ele+++++++++++e 
  MMETSP1325-20131115|13751_1   7 IMQEVEHYQKLVQERNLqqeRWEEQRATLISTHERYIQELTDDFEQKLEEDRKMHEELEDEKNENAKEFEEM 78 
                  77777777777776655444567788888889999***************************9999887765 PP

>> PF10130.4  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.9    0.0002      0.21      33      80 ..       5      51 ..       2      57 .. 0.81
   2 ?    1.7   0.6      0.21   2.2e+02      33      64 ..      51      82 ..      35      84 .] 0.72

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.0002
    PF10130.4 33 eaavaEiekyieklvrkkklseeeleealelllkkiqiveeevyesae 80
                 +++++E+e+y++ lv++++l++e++ee   +l++  + + +e+ ++ e
  MMETSP1325-20131115|13751_1  5 QKIMQEVEHYQK-LVQERNLQQERWEEQRATLISTHERYIQELTDDFE 51
                 788999999987.**************999998877766666666555 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.21
    PF10130.4 33 eaavaEiekyieklvrkkklseeeleealell 64
                 e+ ++E +k  e+l ++k+ +++e+ee+  +l
  MMETSP1325-20131115|13751_1 51 EQKLEEDRKMHEELEDEKNENAKEFEEMKTQL 82
                 45566777777888888888888888776655 PP

>> PF10454.4  Protein of unknown function (DUF2458)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   8.3    0.0013       1.3      29      97 ..      14      77 ..       2      84 .] 0.62

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 0.0013
    PF10454.4 29 irklikeqhkhekqwekerealikkqearkekkkkl....davLksvgaqvddgsknsrkekeeeaeLeafde 97
                  +kl++e++ +++ we++r  li  +e   + +++l    +++L++  +        +++e e++++ ++f+e
  MMETSP1325-20131115|13751_1 14 YQKLVQERNLQQERWEEQRATLISTHE---RYIQELtddfEQKLEEDRK------MHEELEDEKNENAKEFEE 77
                 368************************...7777774444666655443......222233333333333333 PP

>> PF07418.6  Acidic phosphoprotein precursor PCEMA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   6.3    0.0017       1.7     153     224 ..      12      81 ..       2      84 .] 0.63

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 0.0017
    PF07418.6 153 sdappPvkklpkkqelsveeklstineddastlheddaleeevaelDeevaskfndgenkeedEleeeaise 224
                     ++ v++ + +qe  +e++ + i  ++ ++ +  d+  e++ e D+++ ++++d++n++++E+ee + ++
  MMETSP1325-20131115|13751_1  12 EHYQKLVQERNLQQERWEEQRATLISTHERYIQELTDD-FEQKLEEDRKMHEELEDEKNENAKEFEEMK-TQ 81 
                  44444555566667777677766555444444333333.3466699*******************9765.44 PP

>> PF08287.6  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.5    0.0024       2.5      76     147 ..       6      83 ..       2      84 .] 0.85

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.0024
    PF08287.6  76 eleklqrkeetLkakleLqklRLsnsesrseeseen......kskeekvakdavvvasvteeklerlkelkqkkerLk 147
                  ++ +     ++L +  +Lq+ R +++ ++  +++e       +  e+k+++d+++ +++++ek e +ke ++ k++L+
  MMETSP1325-20131115|13751_1   6 KIMQEVEHYQKLVQERNLQQERWEEQRATLISTHERyiqeltDDFEQKLEEDRKMHEELEDEKNENAKEFEEMKTQLE 83 
                  56666677899***************9999888888887776555555899************************997 PP

>> PF05929.6  Phage capsid scaffolding protein (GPO) serine peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   5.0    0.0027       2.8     186     252 ..      20      83 ..       2      84 .] 0.64

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0027
    PF05929.6 186 keasddarfadvgeaveavaehv...qekleatekrlseaekalseleqalaskadelakelaelkesLd 252
                  +++ +++r+ + +   + +++h    qe ++ +e++l e +k    ++++l+++++e+ake+ e+k +L+
  MMETSP1325-20131115|13751_1  20 ERNLQQERWEEQRA--TLISTHEryiQELTDDFEQKLEEDRK----MHEELEDEKNENAKEFEEMKTQLE 83 
                  34444666665444..34555540115666667777755444....588999999*************97 PP

>> PF14357.1  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   6.4     0.011        11      17      64 ..      33      77 ..       5      83 .. 0.85

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.011
    PF14357.1 17 dsldeetraeLkelrddieealeeedaseaedeslaerlneaverFea 64
                  +l ++ ++ ++el dd e++lee     + +e+l+++ ne +++Fe+
  MMETSP1325-20131115|13751_1 33 ATLISTHERYIQELTDDFEQKLEE---DRKMHEELEDEKNENAKEFEE 77
                 456667788899**********99...5557999*************8 PP

>> PF12001.3  Domain of unknown function (DUF3496)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   1.4     0.015        16      33      74 ..       2      43 ..       1      49 [. 0.89
   2 ?    7.3   1.5    0.0046       4.8      32      66 ..      48      82 ..      43      84 .] 0.91

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.015
    PF12001.3 33 kYkqlyleelkirkslseklsktnerlaevstklllekeqsr 74
                  Y+q  ++e+   + l ++ + ++er +e ++ l+ ++e+  
  MMETSP1325-20131115|13751_1  2 AYQQKIMQEVEHYQKLVQERNLQQERWEEQRATLISTHERYI 43
                 59********************************99999855 PP

  == domain 2    score: 7.3 bits;  conditional E-value: 0.0046
    PF12001.3 32 ekYkqlyleelkirkslseklsktnerlaevstkl 66
                 ++++q   e+ k+++ l+++ + + ++ +e++t+l
  MMETSP1325-20131115|13751_1 48 DDFEQKLEEDRKMHEELEDEKNENAKEFEEMKTQL 82
                 4689999999***********************98 PP

>> PF09756.4  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  12.9    0.0059       6.2       6      82 ..       6      82 ..       2      84 .] 0.88

  Alignments for each domain:
  == domain 1    score: 6.0 bits;  conditional E-value: 0.0059
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF09756.4  6 kkakkleekearkqqreaeeeereerkkkeekrekerkeeeekeeekekkkeeeerkeeeekerkeqeeyeklksef 82
                 k ++  e +++  q+r++++e  ee++ +    ++++ +e +   e++ ++ +++++e e++++++++e+e++k ++
  MMETSP1325-20131115|13751_1  6 KIMQEVEHYQKLVQERNLQQERWEEQRATLISTHERYIQELTDDFEQKLEEDRKMHEELEDEKNENAKEFEEMKTQL 82
                 45556699999999*****999999999999999999999999999999999999999999*************986 PP

>> PF11875.3  Domain of unknown function (DUF3395)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.7    0.0016       1.7      23      60 ..       5      42 ..       2      49 .. 0.91
   2 ?    3.5   2.4     0.044        46       9      40 ..      52      82 ..      45      84 .] 0.78

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.0016
    PF11875.3 23 akkreeaeeaikllkelverklkkeekkgGLvIlkAey 60
                 +k ++e e+ +kl++e  +++ + ee++  L+ ++ +y
  MMETSP1325-20131115|13751_1  5 QKIMQEVEHYQKLVQERNLQQERWEEQRATLISTHERY 42
                 67899***************************988777 PP

  == domain 2    score: 3.5 bits;  conditional E-value: 0.044
    PF11875.3  9 keieeqrkklrkevakkreeaeeaikllkelv 40
                 +++ee rk +++  ++k +e +++ +++k++ 
  MMETSP1325-20131115|13751_1 52 QKLEEDRKMHEELEDEK-NENAKEFEEMKTQL 82
                 55788888888887777.88889999999886 PP

>> PF03245.8  Bacteriophage lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   8.3      0.11   1.2e+02       4      51 ..      24      71 ..       2      81 .. 0.61

  Alignments for each domain:
  == domain 1    score: 2.5 bits;  conditional E-value: 0.11
    PF03245.8  4 eakrqadkknqeleaanaeiedlqarqravaeldakhteeLadaksen 51
                 +++r+ +++++ + + ++ i++l+    +  e d+k  eeL+d k+en
  MMETSP1325-20131115|13751_1 24 QQERWEEQRATLISTHERYIQELTDDFEQKLEEDRKMHEELEDEKNEN 71
                 344555555555555555555555544455555666666666666666 PP

>> PF01935.12  Domain of unknown function DUF87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   4.7    0.0083       8.8      99     167 ..      11      79 ..       8      84 .] 0.82

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.0083
   PF01935.12  99 peelldlleelkddepaaeaqrsvleealeqakakeekeklssdepveklleelkkekeelrklknqai 167
                  +e++ +l++e++ +++ +e+qr+ l +++e++ ++  +   +  e + k++eel++ek+e+ k+ ++ +
  MMETSP1325-20131115|13751_1  11 VEHYQKLVQERNLQQERWEEQRATLISTHERYIQELTDDFEQKLEEDRKMHEELEDEKNENAKEFEEMK 79 
                  788999**************************9877777777889999999999966666666555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1966  (0.143798); expected 273.4 (0.02)
Passed bias filter:                      803  (0.0587332); expected 273.4 (0.02)
Passed Vit filter:                       131  (0.00958163); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.52u 0.42s 00:00:00.94 Elapsed: 00:00:00.56
# Mc/sec: 353.15
//
Query:       MMETSP1325-20131115|13753_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       822  (0.0601229); expected 273.4 (0.02)
Passed bias filter:                      510  (0.0373025); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 577.94
//
Query:       MMETSP1325-20131115|13754_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00013   22.1   0.0    0.00025   21.2   0.0    1.5  1  PF00725.17 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00725.17  3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.9e-08   0.00025      70      97 .]       4      31 ..       1      31 [. 0.92

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 1.9e-08
                 GG-..HHHHHHHHTT-----------EC CS
   PF00725.17 70 ayapsplleklveagrlgrktgkgfyky 97
                 + +++++ +kl+ agrlg ktgkg+yky
  MMETSP1325-20131115|13754_1  4 NIRYCEIGDKLCAAGRLGHKTGKGWYKY 31
                 67889**********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|13756_1  [L=48]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      141  (0.010313); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 230.05
//
Query:       MMETSP1325-20131115|13760_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       404  (0.0295494); expected 273.4 (0.02)
Passed bias filter:                      234  (0.0171153); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.37s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 693.95
//
Query:       MMETSP1325-20131115|13764_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      218  (0.015945); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.59
# Mc/sec: 312.74
//
Query:       MMETSP1325-20131115|13765_1  [L=126]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-08   33.7   0.0    3.3e-08   33.2   0.0    1.2  1  PF00237.14 Ribosomal protein L22p/L17e


Domain annotation for each model (and alignments):
>> PF00237.14  Ribosomal protein L22p/L17e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   2.4e-12   3.3e-08      34     103 ..       2      71 ..       1      73 [. 0.94

  Alignments for each domain:
  == domain 1    score: 33.2 bits;  conditional E-value: 2.4e-12
   PF00237.14  34 fvpkkaakivlklLksaeanaennkgldpdklvikeiavnkgptlkrirprArGRatpinkrtshieivl 103
                  f+ kk   i ++l+++a   a +n+g+  + l++++ +v +gp  kri++ +rGR    + r+sh+++ +
  MMETSP1325-20131115|13765_1   2 FSAKKGGAIAKSLIEKASDVALRNHGVARESLFVETLFVTQGPGRKRIKMMGRGRTGLSFIRSSHLNLTI 71 
                  56799999*************99******************************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 656.39
//
Query:       MMETSP1325-20131115|13770_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.8   0.3       0.13   12.5   0.2    1.3  1  PF05178.7 KRI1-like family


Domain annotation for each model (and alignments):
>> PF05178.7  KRI1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   9.3e-06      0.13      31      67 ..       6      41 ..       1      49 [. 0.77

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 9.3e-06
    PF05178.7 31 ekikevaGlkekelseedlekvldedFDpekwdkkma 67
                 ++ k++a  +e+++s  d++ +ld++++p+  d++m+
  MMETSP1325-20131115|13770_1  6 KRAKKAARAAEQDISTADINAFLDANWNPDT-DSDMD 41
                 445555555669*****************86.66665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       398  (0.0291106); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 275.33
//
Query:       MMETSP1325-20131115|13769_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       121  (0.0088502); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.39s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 165.90
//
Query:       MMETSP1325-20131115|13776_1  [L=206]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-12   44.7   0.0    1.4e-11   43.9   0.0    1.4  1  PF00027.24 Cyclic nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00027.24  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   0.0     1e-15   1.4e-11      11      90 ..       2     108 ..       1     109 [. 0.97

  Alignments for each domain:
  == domain 1    score: 43.9 bits;  conditional E-value: 1e-15
                  E-TT-B--EEEEEEE-EEEEEEE-----EE..........................EEEEE-TTEECSGGGCCSSS.B-SSEEEEEEEEEEEEEEHHHHHHHHCC-H CS
   PF00027.24  11 fkeGdpadslyiilsGkvkvykndedgkes..........................ilaelgpGdffGelalltge.prsatvvaltdvevlvipredfrelleknp 90 
                  +k+G  +d++y ++sG ++++ +  +g+ +                          +++ +++ ++fGe ++l+ +  ++ tv++ t+++ l+i r+df+ell  +p
  MMETSP1325-20131115|13776_1   2 CKQGTIPDGFYAVVSGVLELTLEYVGGEHTddtegpllpgqeperidlsekgggplVVGAINEQETFGEVSILYRNvVATETVRTRTHTVMLFIARNDFQELLTLCP 108
                  79*************************999************************************************************************98777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      409  (0.0299152); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.39s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 987.30
//
Query:       MMETSP1325-20131115|13779_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       280  (0.0204798); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.41s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 278.85
//
Query:       MMETSP1325-20131115|13777_1  [L=268]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-06   28.6   0.6    1.6e-05   24.9   0.4    2.3  1  PF00169.24 PH domain


Domain annotation for each model (and alignments):
>> PF00169.24  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.4   1.2e-09   1.6e-05       2     101 ..      50     149 ..      49     152 .. 0.72

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 1.2e-09
                  SBEEEEEEEE.TSSSCEEEEEEEEETTEEEEESSSSTTCECSECEEEECGGEEEEEEEETTSS...CTTSSSSEEEEEETTT...CEEEEEESSHHHHHHHHHHHHH CS
   PF00169.24   2 ikeGyllkks.ellktwkkryfvLtsnyLlyfksskkksykapkgsiplndctvkkasstkfa...lqkesnnyfeitfkdv...esyllsaeseeerkrWvqalkn 101
                  +++Gyl k   +++++wk ryf+L+++ L y+  + k       g+   +   ++ + ++ ++   l   ++ ++++  k +    ++++ a s+e+r++W++a+k 
  MMETSP1325-20131115|13777_1  50 ERQGYLEKLAmKSKRNWKSRYFILQGGSLRYYNRDMK-------GAEKWECRFITPEGQPNDMdinLDIMDRSVVTWGLKLNagpDELIMNAGSQEQRNEWMHAIKG 149
                  789*****99999********************9974.......333334344444444422222223344445555555556688*******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       593  (0.0433733); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 1235.05
//
Query:       MMETSP1325-20131115|13783_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       292  (0.0213575); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 527.20
//
Query:       MMETSP1325-20131115|13788_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       491  (0.0359128); expected 273.4 (0.02)
Passed bias filter:                      384  (0.0280866); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 230.24
//
Query:       MMETSP1325-20131115|13787_1  [L=137]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
          4    7.1   6.6          5    6.8   4.6    1.1  1  PF06679.7 Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> PF06679.7  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   4.6   0.00036         5      18      86 ..      63     131 ..      47     136 .. 0.75

  Alignments for each domain:
  == domain 1    score: 6.8 bits;  conditional E-value: 0.00036
    PF06679.7  18 lllalLaaeaallseaesaas.sePeprtlsalpPgptpanptalleadakkGkasetssggalavspsp 86 
                  ++la   a++ + s+a +a++ + P     sa +P+p+pa   a   +  ++G++ +ts+  + a +  +
  MMETSP1325-20131115|13787_1  63 TFLA-TCAPSRIRSTALTATPtAVPVFALASASSPAPAPAVEPASAPTPPAEGSFISTSTATSFASVTAA 131
                  4555.33445555555555554567778899999*****99999999999*********99999877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       355  (0.0259655); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 713.70
//
Query:       MMETSP1325-20131115|13789_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       163  (0.0119222); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 586.86
//
Query:       MMETSP1325-20131115|13784_1  [L=338]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-42  142.1   0.0    1.4e-09   37.1   0.0    4.9  5  PF13475.1  Domain of unknown function (DUF4116)
  ------ inclusion threshold ------
      0.019   14.4   0.2        5.4    6.5   0.0    2.9  3  PF03259.12 Roadblock/LC7 domain
      0.032   13.8   0.3       0.11   12.1   0.1    1.9  2  PF11577.3  NF-kappa-B essential modulator NEMO


Domain annotation for each model (and alignments):
>> PF13475.1  Domain of unknown function (DUF4116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   4.6e-08   0.00021       6      44 ..      36      74 ..      35      74 .. 0.88
   2 !   37.1   0.0   3.1e-13   1.4e-09       1      49 []      56     104 ..      56     104 .. 0.99
   3 !   27.5   0.0   3.2e-10   1.5e-06       1      34 [.     106     139 ..     106     144 .. 0.98
   4 !   34.1   0.0   2.7e-12   1.2e-08      12      49 .]     161     198 ..     160     198 .. 0.97
   5 !   36.7   0.0   4.2e-13   1.9e-09       1      49 []     200     248 ..     200     248 .. 0.98

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 4.6e-08
    PF13475.1  6 leavkkngsalky.lseeLknDkeivlkAvkqngsalsya 44
                 l av+++g+al   l+ eLk D+e+vl+Av++ng al +a
  MMETSP1325-20131115|13784_1 36 LRAVSQDGFALAGaLW-ELKGDREVVLAAVRSNGRALIHA 74
                 6799999999999557.9*****************99775 PP

  == domain 2    score: 37.1 bits;  conditional E-value: 3.1e-13
    PF13475.1   1 DrEivleavkkngsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49 
                  DrE+vl+av++ng al +++++L+ D  +v+ Av qn +a++ as++L+
  MMETSP1325-20131115|13784_1  56 DREVVLAAVRSNGRALIHAWPSLRADPTVVITAVAQNYEAMKWASDDLK 104
                  9**********************************************97 PP

  == domain 3    score: 27.5 bits;  conditional E-value: 3.2e-10
    PF13475.1   1 DrEivleavkkngsalkylseeLknDkeivlkAv 34 
                  Dr++vl +v+  g alky+ +e+k+D eivl+Av
  MMETSP1325-20131115|13784_1 106 DRDFVLRVVSVAGHALKYAADEFKSDVEIVLAAV 139
                  9********************************9 PP

  == domain 4    score: 34.1 bits;  conditional E-value: 2.7e-12
    PF13475.1  12 ngsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49 
                  +g+al + se+Lk D+++v +Av ++g al+ as+eL+
  MMETSP1325-20131115|13784_1 161 DGYALDHTSESLKADRDFVRQAVSRDGRALCSASPELQ 198
                  79**********************************97 PP

  == domain 5    score: 36.7 bits;  conditional E-value: 4.2e-13
    PF13475.1   1 DrEivleavkkngsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49 
                  DrE+vl av +ng+al ++s eLk D  +v  A+ qng+al++a  eLr
  MMETSP1325-20131115|13784_1 200 DREVVLDAVCQNGKALCHASLELKADPIVVVMAMAQNGDALKFANAELR 248
                  9*******************************************99997 PP

>> PF03259.12  Roadblock/LC7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0012       5.6      21      54 ..      39      74 ..      37      79 .. 0.91
   2 ?    6.5   0.0    0.0012       5.4      23      73 ..      66     118 ..      64     127 .. 0.80
   3 ?   -1.4   0.0      0.34   1.6e+03      21      37 ..     183     201 ..     182     211 .. 0.66

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.0012
   PF03259.12 21 vskdGlvlas..stldnddadrlAalasgllaaaka 54
                 vs+dG++la   + l+ d+   lAa+ s+  a+++a
  MMETSP1325-20131115|13784_1 39 VSQDGFALAGalWELKGDREVVLAAVRSNGRALIHA 74
                 89***********************99988887776 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0012
   PF03259.12  23 kdGlvlas.stldnddadrlAalasgllaaakalarelg.egelkelliegkk 73 
                  ++G +l + + + + d   + ++++++ +a+k+++++l+ + ++   ++ +++
  MMETSP1325-20131115|13784_1  66 SNGRALIHaWPSLRADPTVVITAVAQNYEAMKWASDDLKhDRDFVLRVVSVAG 118
                  677766666888899999999*****************988777666666555 PP

  == domain 3    score: -1.4 bits;  conditional E-value: 0.34
   PF03259.12  21 vskdGlvlas..stldndd 37 
                  vs+dG +l+s    l+ d+
  MMETSP1325-20131115|13784_1 183 VSRDGRALCSasPELQADR 201
                  899*****99444444444 PP

>> PF11577.3  NF-kappa-B essential modulator NEMO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.1   5.1e+03      40      52 ..     169     181 ..     165     186 .. 0.74
   2 ?   12.1   0.1   2.4e-05      0.11      20      44 ..     238     262 ..     234     267 .. 0.93

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.1
    PF11577.3  40 qekqreEreflee 52 
                   e+ + +r+f+ +
  MMETSP1325-20131115|13784_1 169 SESLKADRDFVRQ 181
                  6788999999876 PP

  == domain 2    score: 12.1 bits;  conditional E-value: 2.4e-05
    PF11577.3  20 ealkqsNqamKeRfEeLlkwqekqr 44 
                  +alk  N +++ R  +L++w ++q+
  MMETSP1325-20131115|13784_1 238 DALKFANAELRRRQNGLAHWVRRQL 262
                  8********************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       387  (0.028306); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.46s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 1723.34
//
Query:       MMETSP1325-20131115|13793_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-16   59.9   3.0    1.5e-16   59.7   2.1    1.1  1  PF06963.7 Ferroportin1 (FPN1)
  ------ inclusion threshold ------
       0.21   11.2   0.0       0.21   11.2   0.0    2.2  2  PF07332.6 Protein of unknown function (DUF1469)


Domain annotation for each model (and alignments):
>> PF06963.7  Ferroportin1 (FPN1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   2.1   2.2e-20   1.5e-16     335     432 .]       8     108 ..       1     108 [. 0.87

  Alignments for each domain:
  == domain 1    score: 59.7 bits;  conditional E-value: 2.2e-20
    PF06963.7 335 scLllavvsvflpgssl...salsvvlllvgvalsRiGlwsfdlavtqllQegvpesernvvsgvqislqslfdllkfaltivapnpeeFkilvliSvgav 432
                  +    av++  ++g s+   s + +++++++v++sR+Gl++fd+ v++l+Q +v+e++rn+v++v++sl s+  ll +a  +   +pe+F  +v  S++av
  MMETSP1325-20131115|13793_1   8 CSFSSAVAAADAQGGSMgtaSMATLFVFMLAVVVSRVGLYGFDVGVLELQQRQVDEKDRNAVGAVENSLTSAGTLLIMAYSMDTTTPETFVHIVWASAVAV 108
                  344455555555555558889999*************************************************************************9998 PP

>> PF07332.6  Protein of unknown function (DUF1469)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   3.0      0.23   1.6e+03      34      57 ..      20      43 ..       6      56 .. 0.53
   2 ?   11.2   0.0   3.1e-05      0.21      21     118 ..      55     147 ..      52     150 .. 0.75

  Alignments for each domain:
  == domain 1    score: -1.3 bits;  conditional E-value: 0.23
    PF07332.6 34 agkglgllgaalvlalvallvlla 57
                  g+++g   +a +++++ ++v++ 
  MMETSP1325-20131115|13793_1 20 QGGSMGTASMATLFVFMLAVVVSR 43
                 333444444444444444444444 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 3.1e-05
    PF07332.6  21 eLakaElkekakragkglgl.lgaalvlalvallvllaalvaaLaealvlpawlAalivavvllllAgilalvgkrrlkakslapertieelkedveal 118
                  eL +  + ek ++a++++   l  a+ l+++a+ + +++   ++   +v   w++a++v v+ ll ++ l l+  +  +  +  +e++ ++  + +++l
  MMETSP1325-20131115|13793_1  55 ELQQRQVDEKDRNAVGAVENsLTSAGTLLIMAYSMDTTTPETFV--HIV---WASAVAVCVAALLFGAYLKLWHEHVHS-HPAGFEDSHAHTTQQRRML 147
                  66677777777777777764255677777777777777777777..554...7*****************999877776.7888888888877777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       765  (0.0559538); expected 273.4 (0.02)
Passed bias filter:                      447  (0.0326946); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.49s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 922.37
//
Query:       MMETSP1325-20131115|13806_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       567  (0.0414716); expected 273.4 (0.02)
Passed bias filter:                      484  (0.0354008); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 474.17
//
Query:       MMETSP1325-20131115|13798_1  [L=251]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.22   11.5   7.0      0.034   14.1   2.0    1.9  2  PF06549.7 Protein of unknown function (DUF1118)


Domain annotation for each model (and alignments):
>> PF06549.7  Protein of unknown function (DUF1118)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       0.5   6.8e+03      64     104 ..      19      30 ..      13      37 .. 0.47
   2 ?   14.1   2.0   2.5e-06     0.034       2      52 ..     104     152 ..     103     201 .. 0.86

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 0.5
    PF06549.7  64 Lpllvaaiaavvlvpddsaalvavqavvalalvvggsallv 104
                  L +l                              +g+a+  
  MMETSP1325-20131115|13798_1  19 LVALC-----------------------------AGTATAY 30 
                  33333.............................3333333 PP

  == domain 2    score: 14.1 bits;  conditional E-value: 2.5e-06
    PF06549.7   2 lekrkvLskvekagLLskaeelGltLssiekLgllskaedlglLsllenaa 52 
                  +  + +L+k  +ag+L + ee GltL  +e    l   e l+lL l++n+ 
  MMETSP1325-20131115|13798_1 104 VGELNLLTKTAEAGILTALEEKGLTLGQLEA--ALPLVEKLQLLKLVQNPI 152
                  66789*************************6..455568899999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.41s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 1307.58
//
Query:       MMETSP1325-20131115|13813_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|13814_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-12   47.2   0.0    1.7e-12   47.1   0.0    1.0  1  PF02204.13 Vacuolar sorting protein 9 (VPS9) domain


Domain annotation for each model (and alignments):
>> PF02204.13  Vacuolar sorting protein 9 (VPS9) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   1.3e-16   1.7e-12      40     103 ..       7      70 ..       3      71 .. 0.94

  Alignments for each domain:
  == domain 1    score: 47.1 bits;  conditional E-value: 1.3e-16
   PF02204.13  40 kgeslgaDdlLPiliyvviksnppnllsnvqyiqefrskkllsgeegYylttlqaavefienle 103
                  + ++++aDd+LP++++ +i++ p++l+++ + + ++ ++++   e gYy+++lqaav ++ nl+
  MMETSP1325-20131115|13814_1   7 EISPMSADDFLPMFVFAIIHAAPSELMLTKEMVVHLIDPEEAIAERGYYVASLQAAVHHVLNLK 70 
                  56799******************************************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.56
# Mc/sec: 316.66
//
Query:       MMETSP1325-20131115|13812_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   13.4   8.8      0.041   13.0   6.1    1.3  1  PF13136.1  Protein of unknown function (DUF3984)
      0.082   11.7   2.7      0.085   11.6   1.9    1.2  1  PF00937.13 Coronavirus nucleocapsid protein


Domain annotation for each model (and alignments):
>> PF13136.1  Protein of unknown function (DUF3984)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   6.1   6.1e-06     0.041     164     213 ..      16      66 ..      11     102 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 6.1e-06
    PF13136.1 164 deeeeaeerelarerelasrrasrrgrsgvstp.saalsrrgSraaSrrgs 213
                  +++++++e+e+a+e+e+ ++ra rr+ sg s   s+  sr gSr++Sr gs
  MMETSP1325-20131115|13812_1  16 EQAHQQVEEEVAEEEEKVESRARRRSISGDSITsSREGSREGSRSTSREGS 66 
                  667888999999999999999988888775543378888888888888887 PP

>> PF00937.13  Coronavirus nucleocapsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.9   1.2e-05     0.085     147     191 ..      21      68 ..       5     128 .. 0.57

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.2e-05
   PF00937.13 147 rFseglPkgfeveefrgrSrsssrss.......srsqsRsssrsksrsnsnk 191
                  +    + +++  ee + +Sr+  rs        sr+ sR+ srs+sr+ s++
  MMETSP1325-20131115|13812_1  21 Q----VEEEVAEEEEKVESRARRRSIsgdsitsSREGSREGSRSTSREGSPG 68 
                  3....33333333334444444443333423345555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       910  (0.0665594); expected 273.4 (0.02)
Passed bias filter:                      619  (0.045275); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 683.22
//
Query:       MMETSP1325-20131115|13818_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-05   22.8   0.2    3.3e-05   22.5   0.1    1.1  1  PF04547.7 Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> PF04547.7  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   2.4e-09   3.3e-05     382     451 ..       1      65 [.       1      66 [. 0.88

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 2.4e-09
    PF04547.7 382 lgvlavitNafliaftsdgqlqrllndlslaarlllvvvlehvvlllkyliavlipdipewvreelkree 451
                  ++ +++++N+ li+f     l++   + + a +++++ ++++v+++l  +++vl++d+p +++ +l+r++
  MMETSP1325-20131115|13818_1   1 MTGISIVVNSCLICFV----LDGSGAS-TEAGKVWVFNAIQYVLFILMLVTQVLVEDEPFKMKVQLARQD 65 
                  6779************....4444444.4578***********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      366  (0.02677); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.40s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 651.09
//
Query:       MMETSP1325-20131115|13821_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       197  (0.014409); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 314.82
//
Query:       MMETSP1325-20131115|13820_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-10   39.2   0.0    4.2e-09   35.8   0.0    2.4  3  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0     0.045   6.1e+02      23      31 ..       9      17 ..       5      21 .. 0.80
   2 ?   -2.5   0.0      0.33   4.6e+03      21      31 ..      87      97 ..      86      98 .. 0.82
   3 !   35.8   0.0   3.1e-13   4.2e-09       3      35 ..     114     146 ..     112     148 .. 0.91

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.045
                 HHHTTTSHH CS
   PF00627.26 23 LratnnnvE 31
                 L++++++ +
  MMETSP1325-20131115|13820_1  9 LQKCGGDYD 17
                 9*****965 PP

  == domain 2    score: -2.5 bits;  conditional E-value: 0.33
                 HHHHHTTTSHH CS
   PF00627.26 21 kALratnnnvE 31
                  AL  +++++E
  MMETSP1325-20131115|13820_1 87 SALATSGQSIE 97
                 59999999998 PP

  == domain 3    score: 35.8 bits;  conditional E-value: 3.1e-13
                  HHHHHHHHH----HHHHHHHHHHTTTSHHHHHH CS
   PF00627.26   3 eeaiqqLreMGfsreeakkALratnnnvErAve 35 
                  ++++++L++MGf+++ ak+AL+++n+++  A  
  MMETSP1325-20131115|13820_1 114 AKSLKTLVDMGFEESKAKQALEEANGDEKDALT 146
                  789*************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       417  (0.0305003); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.35s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 764.79
//
Query:       MMETSP1325-20131115|13822_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       503  (0.0367905); expected 273.4 (0.02)
Passed bias filter:                      424  (0.0310123); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|13826_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0021   17.8   0.1     0.0031   17.3   0.0    1.3  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
      0.003   17.0   0.0     0.0041   16.5   0.0    1.2  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   4.5e-07    0.0031       1      65 [.      58     118 ..      58     120 .. 0.88

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 4.5e-07
    PF14259.1   1 lyvrglppsvteedlreffspygkvegvriprnkdgrgrgfAfvefeseedAqkalkkln.lvlkg 65 
                  l v+g+ ++v +++l+++  ++g +e v+i+r +      +A++e+ s +dA ka+ + +   lkg
  MMETSP1325-20131115|13826_1  58 LAVSGIANNVVNDELKDLITKAG-IEVVEIKRLT----LVEALIELNSIDDAVKAMIAAHnAELKG 118
                  579*******************9.7789999975....79**********9999998855599998 PP

>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   6.1e-07    0.0041       2      67 ..      59     119 ..      58     121 .] 0.87

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 6.1e-07
                  EEESSTTTSSHHHHHHHHCTCTCE.EEEEEEESTTSSEE-EEEEEESSHHHHHHHHHHHTTEBETTE CS
   PF00076.17   2 fVgnLppdvteeeLkelFskfGpi.esiklvrdetgrskgfafVeFeseedaekAlealngkklggr 67 
                   V+++ ++v ++eLk+l  k G   ++ik  +         a +e  s +da kA+ a ++ +l+g 
  MMETSP1325-20131115|13826_1  59 AVSGIANNVVNDELKDLITKAGIEvVEIKRLT------LVEALIELNSIDDAVKAMIAAHNAELKGE 119
                  6999*****************96635555555......6************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       455  (0.0332797); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.41s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 557.61
//
Query:       MMETSP1325-20131115|13825_1  [L=243]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   12.0   0.3        1.7    8.3   0.2    2.3  1  PF04513.7 Baculovirus polyhedron envelope protein, PEP, C terminus
        1.7    7.0   7.9        2.7    6.3   5.5    1.4  1  PF10267.4 Predicted transmembrane and coiled-coil 2 protein


Domain annotation for each model (and alignments):
>> PF04513.7  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.2   0.00025       1.7      50     133 ..      58     160 ..       4     164 .. 0.62

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00025
    PF04513.7  50 lsedlksllaeldt................rldtlltnLtdalnalqdtlrne.Ltnlnsi..ltnLlssvtNinstLnnllqalnnldlgalsqeledaldt 133
                  + + lks+l+++ t                  ++  ++L + l +l  +++ e L +l+s   +t  + +vt   ++L +++qa+  + +g+  +e++  ++ 
  MMETSP1325-20131115|13825_1  58 FMATLKSALSSVPTanghtngskgstgsegGHASRWAALGQLLRRLPCKIKYElLSALDSTmtVTAPNPQVTAFMTALRGIIQAVPTTGNGEACHEAKRHTNA 160
                  4444444444444444444444455555553344444455555555544433312344443115556679***************999999998888877765 PP

>> PF10267.4  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.5    0.0004       2.7     103     217 ..       6     221 ..       1     235 [. 0.65

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0004
    PF10267.4 103 kdvganvkgslsglSl.avvskprefaslirnkf.gsadniaslkd...................................................................................................sle.dlegeeaaralsssatlvleskyksddssecssatsssadansnkggetg.slagsaaaaqselslkkl 217
                   dv+ +vk+s+s lS+ a+++   +    i+     s + ++ ++d                                                                                                    +e ++++++++ +  ss+tl++ s  +s  ss  ss ts s+ ++s ++  ++ + + ++aa++ ++++++ 
  MMETSP1325-20131115|13825_1   6 SDVKKKVKQSVSDLSNgAMAQMLANLPCKIKDDLlSSVEAVSTTSDsaqvktfmatlksalssvptanghtngskgstgsegghasrwaalgqllrrlpckikyellsaldstmtvtapnpqvtafmtalrgiiqavpttgngeaCHEaKRHTNATSSSPPSSSTLSSPSPSSSSSSSSSSSSTSTSFASSSFSS--AAsKATFKSAAYKTKQRMRQH 221
                  677778888888888876777666776777766414445555555577777788888888888888888888888888888888888888999999999999999999999999999999999999999999998888877554312223444444444444445555444455555555666666665555554..331333344444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       998  (0.0729959); expected 273.4 (0.02)
Passed bias filter:                      498  (0.0364248); expected 273.4 (0.02)
Passed Vit filter:                        69  (0.00504681); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.79u 0.42s 00:00:01.21 Elapsed: 00:00:00.61
# Mc/sec: 954.61
//
Query:       MMETSP1325-20131115|13834_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.52
# Mc/sec: 230.42
//
Query:       MMETSP1325-20131115|13829_1  [L=203]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0049   16.5   1.3      0.016   14.9   0.9    1.9  1  PF08037.6 Attractin family


Domain annotation for each model (and alignments):
>> PF08037.6  Attractin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.9   1.1e-06     0.016       4      26 ..     122     144 ..     120     167 .. 0.88

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.1e-06
                  ---HHHHHHHS-SSS------SS CS
    PF08037.6   4 efitseCemrykdCedAssCdal 26 
                  +f t  C+mr   C++A++C+ +
  MMETSP1325-20131115|13829_1 122 DFSTNYCNMRMLYCGEADGCTPV 144
                  68999***************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.53
# Mc/sec: 917.85
//
Query:       MMETSP1325-20131115|13837_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        4.7    7.3   6.8        5.5    7.1   4.7    1.2  1  PF12355.3  Down syndrome cell adhesion molecule C terminal


Domain annotation for each model (and alignments):
>> PF12355.3  Down syndrome cell adhesion molecule C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   4.7    0.0004       5.5      54      86 ..      15      47 ..       3      50 .. 0.82

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0004
    PF12355.3 54 sarnpvsgspepppppprnhdqsnssfndskes 86
                 +a  pv  sp p pppp     s ss   s+ s
  MMETSP1325-20131115|13837_1 15 AAAIPVPSSPVPAPPPPPASPTSTSSAVSSQSS 47
                 45569999****999999999999998777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 270.23
//
Query:       MMETSP1325-20131115|13839_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-07   28.8   0.0    8.2e-07   28.7   0.0    1.0  1  PF02816.13 Alpha-kinase family


Domain annotation for each model (and alignments):
>> PF02816.13  Alpha-kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0     6e-11   8.2e-07      42     127 ..       2      80 ..       1      81 [] 0.82

  Alignments for each domain:
  == domain 1    score: 28.7 bits;  conditional E-value: 6e-11
                  HHHHHHHHHHHHH---HHHHT.....--SS--EE---E.EEEETTS----EEEEEEE---------B-----B-S--SHH.....H CS
   PF02816.13  42 yfeevksqliakelakkFnkelqeeenkkkkieflpsllvyelenkskekklilvEpflkgefkKynsnsgkvetkrrseveelaq 127
                  +++++k+   a +l++++n++  + +  + +  + +++  +e +n+   ++ +l Epf++ +++K+nsnsg+   ++++++  ++q
  MMETSP1325-20131115|13839_1   2 FKDDIKAVEKALHLVEEWNRRGFVDKTIRLN--IPDVWTFMEGSNRA--GQKVLQEPFID-DYQKFNSNSGWA--DDETPWPRVMQ 80 
                  5789999**************8855554444..45888888866665..59*********.************..77899988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      303  (0.0221621); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 404.39
//
Query:       MMETSP1325-20131115|13840_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-33  113.8   0.0      5e-33  113.4   0.0    1.2  1  PF01159.14 Ribosomal protein L6e


Domain annotation for each model (and alignments):
>> PF01159.14  Ribosomal protein L6e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   0.0   3.7e-37     5e-33       2     108 .]      79     183 .]      78     183 .] 0.94

  Alignments for each domain:
  == domain 1    score: 113.4 bits;  conditional E-value: 3.7e-37
   PF01159.14   2 NgvPlrRvnqrYviaTstkvdisevdvpeklddeyFkkekkkkkkkseeeffaekkekkelkekrkadqkavDkallaaikkepelkkYLksrFslkkgdkPHklkf 108
                  NgvP++Rvnq+YviaTs+kv++ +  +   +dd+yF++e ++k++ +e+ f aek+  + ++ekrkadq+a+Dka++a+ikk++ l++YL+++Fslk+gdkPH+++f
  MMETSP1325-20131115|13840_1  79 NGVPIKRVNQAYVIATSQKVELPKK-L-PAIDDAYFAREAEEKAEDDEGVFSAEKAGGSGPSEKRKADQEALDKAMMASIKKVEMLEAYLQAKFSLKNGDKPHEMVF 183
                  **********************984.4.59**********88888888888888888************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 913.61
//
Query:       MMETSP1325-20131115|13847_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       325  (0.0237712); expected 273.4 (0.02)
Passed bias filter:                      280  (0.0204798); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 448.68
//
Query:       MMETSP1325-20131115|13853_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 427.92
//
Query:       MMETSP1325-20131115|13855_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 252.47
//
Query:       MMETSP1325-20131115|13846_1  [L=509]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       451  (0.0329871); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.84u 0.34s 00:00:01.18 Elapsed: 00:00:00.48
# Mc/sec: 2541.14
//
Query:       MMETSP1325-20131115|13854_1  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-30  106.7   0.2    1.5e-30  106.3   0.1    1.1  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.3   0.1   1.1e-34   1.5e-30      11     155 ..      45     188 ..      36     189 .. 0.79

  Alignments for each domain:
  == domain 1    score: 106.3 bits;  conditional E-value: 1.1e-34
                  XXXX.XXXXXX.---...-TTTTT--------TTT------------------S--TT--.STT--.-...--.--S-TT.THHHH---HHHHHHHHTT------------------------..-----------STTT----TTTTT------- CS
   PF00504.16  11 gdlg.fDplglskdp...tlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawaeag.g...ls.lptllalqillligflelareqelkapesegsekraypGglgfdplgla..kdeeekaelklkEiknGRlAMiaflgfvvqa 155
                  +  g +Dp+g sk++   tlkr+r +E++HGR+A +a++G+++ ++ t  +++ ++++ +++a+   g   l  +p ++++qi+l++g+le +    +k+       ++a pG+l    +++   +d+e k+++ l+EiknGRlAM+a++g++vq+
  MMETSP1325-20131115|13854_1  45 ETAGvWDPFGYSKNAdaaTLKRYRCVEIKHGRIAQIATIGYIMGDVWTF-PGYLSKVDNVKFADVPaGmgaLTaVPLAGWAQIFLFCGLLEKK---FFKQ------DDDAAPGDL--AKFNWVryDDAELKERKLLSEIKNGRLAMMAIMGMMVQE 188
                  55679*******88888****************************8865.55666666666665332223322499999************85...3322......35678**95..445555579*****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 1104.41
//
Query:       MMETSP1325-20131115|13856_1  [L=225]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-10   38.5   3.1    1.3e-09   37.9   2.1    1.2  1  PF03874.11 RNA polymerase Rpb4
  ------ inclusion threshold ------
       0.01   14.1   0.7      0.012   13.8   0.5    1.1  1  PF04163.7  Tht1-like nuclear fusion protein
      0.026   13.6   0.1      0.036   13.1   0.0    1.2  1  PF10505.4  NMDA receptor-regulated gene protein 2
      0.068   12.9   0.1       0.12   12.0   0.0    1.4  1  PF12731.2  Mating-type protein beta 1
       0.15   12.0   3.1       0.17   11.8   0.1    2.5  3  PF04380.8  Membrane fusogenic activity


Domain annotation for each model (and alignments):
>> PF03874.11  RNA polymerase Rpb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   2.1   4.6e-13   1.3e-09       1     114 [.     101     218 ..     101     219 .. 0.80

  Alignments for each domain:
  == domain 1    score: 37.9 bits;  conditional E-value: 4.6e-13
                  EE-TTHHHHHHHHCCCHH-HHHCHCHHHHHH....-HHHHCHHHHCCCC-SS-SCCCHHHHCCCCT.........TS-.....-HHHHHCHHHH--SS..CCCCCCCSTTGTTSS-HHHHHHHHHHHHH CS
   PF03874.11   1 aLsnsEvlllLkeeleerknkskkssekeqvkgnlnkilkktleYltkfsrlkneeevrelveelk.........sfe....ltkaeklqivnlrPet..avelkalieslekrfsdeqleeiLdelsk 114
                  +L+n Ev   L++  eer +k+         +++l +++ ++l+Y+++ + ++  ++++++ + l+         +      l+  e++ ++nl  ++  a+e+  li+sl++rf++e +e++L  +++
  MMETSP1325-20131115|13856_1 101 FLTNQEVAVTLQHIKEER-EKD---------HRQLPTMMLESLDYVKRNCGVNSMSKIEKFTDSLRkrledlsdeT-RedqkLHAYEIAALANLIQTDseAAEAVELIPSLKDRFDPEFIEQVLAVCQQ 218
                  79**********555555.553.........789**************8888888887777777776666666650.15567***********98765227788889*****************98875 PP

>> PF04163.7  Tht1-like nuclear fusion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.5   4.5e-06     0.012     306     389 ..     123     202 ..      98     223 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 4.5e-06
    PF04163.7 306 knlvetsedslkesvssnidlvnsgfqeledlsiqlkkelqslkkllsesqnleaeellqgksdilnvskdhlkvleilrelid 389
                  ++l ++  +sl ++v++n   vns + ++e+++  l+k+l+ l+ ++ e+q+l+a e+    + i  +s       e ++ l d
  MMETSP1325-20131115|13856_1 123 RQLPTMMLESL-DYVKRNCG-VNS-MSKIEKFTDSLRKRLEDLSDETREDQKLHAYEIAALANLIQTDSEAAE-AVELIPSLKD 202
                  45666666655.68888886.899.9********************************999988888887654.4466666655 PP

>> PF10505.4  NMDA receptor-regulated gene protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.3e-05     0.036      26     110 ..      97     184 ..      82     196 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.3e-05
    PF10505.4  26 ddllllvrlsvalve..dskskekierkfpvnvliKlEy.qadyGvEilsksEliklWtellLlsaevgyvarisartskvlleeklt 110
                  ddl +l    va++     +++ek +r++p  +l  l+y + ++Gv  +sk E     +++ L   +   +   +++ ++++ + +l 
  MMETSP1325-20131115|13856_1  97 DDLIFLTNQEVAVTLqhIKEEREKDHRQLPTMMLESLDYvKRNCGVNSMSKIEKFTDSLRKRLEDLSDETREDQKLHAYEIAALANLI 184
                  577777666555443213477888999***********97889************999999999988888888888888887777665 PP

>> PF12731.2  Mating-type protein beta 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.6e-05      0.12      40      87 ..     145     191 ..     125     197 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.6e-05
    PF12731.2  40 lsawskfdellqschdsLseeTleliysfssliatvssglleleseke 87 
                  +s+++kf+++l++  ++Ls+eT+e+    ++ ia++++ l++++se +
  MMETSP1325-20131115|13856_1 145 MSKIEKFTDSLRKRLEDLSDETREDQKLHAYEIAALAN-LIQTDSEAA 191
                  68899****************************99985.556655544 PP

>> PF04380.8  Membrane fusogenic activity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   6.4e-05      0.17       7      49 ..      95     138 ..      90     139 .. 0.87
   2 ?   -1.1   0.0      0.69   1.9e+03       9      77 ..     153     163 ..     145     173 .. 0.57
   3 ?   -2.0   0.1       1.3   3.7e+03      53      69 ..     207     223 ..     200     224 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 6.4e-05
    PF04380.8   7 llddlakklsealgaa.qglreeveknvrallesalsklDLVtR 49 
                    ddl  + ++ ++   q+++ee ek  r+l + +l++lD V+R
  MMETSP1325-20131115|13856_1  95 ATDDLIFLTNQEVAVTlQHIKEEREKDHRQLPTMMLESLDYVKR 138
                  56777778888888888**************************9 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.69
    PF04380.8   9 ddlakklsealgaaqglreeveknvrallesalsklDLVtReEFdvqrevlartRekleaLearvaeLe 77 
                  d+                                                          L +r+++L+
  MMETSP1325-20131115|13856_1 153 DS----------------------------------------------------------LRKRLEDLS 163
                  33..........................................................444444433 PP

  == domain 3    score: -2.0 bits;  conditional E-value: 1.3
    PF04380.8  53 dvqrevlartRekleaL 69 
                  +  ++vla  ++++e+L
  MMETSP1325-20131115|13856_1 207 EFIEQVLAVCQQEMEEL 223
                  56778888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       658  (0.0481276); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.39s 00:00:00.93 Elapsed: 00:00:00.49
# Mc/sec: 1100.37
//
Query:       MMETSP1325-20131115|13859_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-06   25.3   0.0    5.8e-06   25.1   0.0    1.1  1  PF01137.16 RNA 3'-terminal phosphate cyclase


Domain annotation for each model (and alignments):
>> PF01137.16  RNA 3'-terminal phosphate cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   4.3e-10   5.8e-06     174     225 ..      43     116 ..       6     118 .. 0.78

  Alignments for each domain:
  == domain 1    score: 25.1 bits;  conditional E-value: 4.3e-10
                  --...................--B--HHHHHHHHHHHH---..--EEESS--H....HHHHHHHHHHHHSS-EEE CS
                  xx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxx RF
   PF01137.16 174 ik...................aavDehladqlillmaLaggdvsevrvgeltl....hlktnlrviekflgvkfe 225
                  i+                   aavDeh+adq ++++aLa+g++ ++rv+  +     h+++++ vi++++g+ f+
  MMETSP1325-20131115|13859_1  43 INrlnvakallkklvalvdmgAAVDEHTADQCLVYAALADGQT-RLRVPAHSQrtslHIESAISVIQTMTGAVFT 116
                  445556667777777777777********************76.99997655444449***********998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       339  (0.0247952); expected 273.4 (0.02)
Passed bias filter:                      306  (0.0223815); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.36s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 640.56
//
Query:       MMETSP1325-20131115|13857_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.71
# Mc/sec: 563.65
//
Query:       MMETSP1325-20131115|13863_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-09   37.8   0.1    1.9e-09   37.3   0.1    1.2  1  PF05118.10 Aspartyl/Asparaginyl beta-hydroxylase


Domain annotation for each model (and alignments):
>> PF05118.10  Aspartyl/Asparaginyl beta-hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.1   1.4e-13   1.9e-09     132     163 .]      73     104 ..      67     104 .. 0.94

  Alignments for each domain:
  == domain 1    score: 37.3 bits;  conditional E-value: 1.4e-13
                  --EEE-TTS-EEEE--SSS-EEEEEEEEE-TT CS
   PF05118.10 132 ellifDesfeHeaanesdqeRliLliDlehpe 163
                  ++l+fD+s+eHe++n +d++R++Ll D++hp+
  MMETSP1325-20131115|13863_1  73 KALVFDDSYEHEVWNRTDEDRVVLLWDVWHPD 104
                  789***************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       254  (0.0185781); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 691.68
//
Query:       MMETSP1325-20131115|13871_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 230.24
//
Query:       MMETSP1325-20131115|13872_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       137  (0.0100205); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 258.81
//
Query:       MMETSP1325-20131115|13867_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       354  (0.0258923); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 855.84
//
Query:       MMETSP1325-20131115|13873_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-13   50.0   0.0    2.5e-13   49.1   0.0    1.5  1  PF13193.1  Domain of unknown function (DUF4009)
    6.5e-07   27.9   0.1    8.6e-07   27.5   0.1    1.2  1  PF00501.23 AMP-binding enzyme
  ------ inclusion threshold ------
      0.059   13.6   0.0      0.085   13.1   0.0    1.3  1  PF11716.3  Mycothiol maleylpyruvate isomerase N-terminal domain


Domain annotation for each model (and alignments):
>> PF13193.1  Domain of unknown function (DUF4009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.0   5.4e-17   2.5e-13       1      41 []      78     123 ..      78     123 .. 0.89

  Alignments for each domain:
  == domain 1    score: 49.1 bits;  conditional E-value: 5.4e-17
    PF13193.1   1 ykvPreveFVde.LPKTrSGKIlRRlLRaial.ge...gdpstled 41 
                  +++P++ +  +  LPKTrSGKI+RR+LR++a  +    gd+stl d
  MMETSP1325-20131115|13873_1  78 FAAPDQFHWANTgLPKTRSGKIMRRILRKVATlETealGDTSTLAD 123
                  5788888888888****************99966699******987 PP

>> PF00501.23  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.1   1.9e-10   8.6e-07     386     417 ..       2      33 ..       1      34 [. 0.97

  Alignments for each domain:
  == domain 1    score: 27.5 bits;  conditional E-value: 1.9e-10
                  -GGGEEE----EEEHHHHHHHHHTSTTEEEEE CS
   PF00501.23 386 RkkdqikirGeniepgeiEsallehpgvaeaa 417
                  R++d+++++G+ni ++e+Esa+  hp+v+eaa
  MMETSP1325-20131115|13873_1   2 RVDDVVIVSGHNIGTAEVESAVVLHPDVSEAA 33 
                  99****************************98 PP

>> PF11716.3  Mycothiol maleylpyruvate isomerase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.9e-05     0.085      63     130 ..      37     105 ..       5     109 .. 0.69

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1.9e-05
                  SSS.-HHH....HHHHH----S-HHHHHHHHHHHHHHHHHHHHT--TCGGG-EEE-----EEETTHHHHHHH CS
    PF11716.3  63 aaplvtaa....aeavdlaaslapeallaafraavtrlaaalaalppdaradtlgiplgprslgeflrtrlv 130
                   +++v  +      + ++ a +++++l++++ + v++ + a+aa ++ ++a t+   l  ++ g  +r+ l+
  MMETSP1325-20131115|13873_1  37 IEHPVKGQslyvYVTLNADAKDPDDELVKELKGLVRSQVGAFAAPDQFHWANTG---LPKTRSGKIMRRILR 105
                  3333333355558889999*************************8888888888...555555668887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.34s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 724.12
//
Query:       MMETSP1325-20131115|13876_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-19   70.9   0.5    1.3e-19   70.8   0.4    1.0  1  PF00112.18 Papain family cysteine protease
  ------ inclusion threshold ------
       0.01   14.2   0.2      0.012   14.1   0.1    1.0  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.4   1.9e-23   1.3e-19     156     218 ..       4      74 ..       1      76 [. 0.83

  Alignments for each domain:
  == domain 1    score: 70.8 bits;  conditional E-value: 1.9e-23
                  BSST......CC-T..TG--EEEEE---BSCT.TC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
   PF00112.18 156 yket......ecss..telnhavlivGygven.gkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                  y+++      ec+s   + +h vlivGyg+e+ g++yWi++NSW++ wG++GY++ia ++n  cg+++++++
  MMETSP1325-20131115|13876_1   4 YDSPmigedgECKSdpGSSDHIVLIVGYGEEEdGTEYWILRNSWSKYWGTDGYMKIASDQN-ACGVTNNPTF 74 
                  4443333336777766789**********9987**************************88.*****99876 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   1.7e-06     0.012     356     398 ..      19      60 ..      11      65 .. 0.83

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.7e-06
   PF03051.10 356 eslmtHamvltgvdvdddgkvtkwkvEnsWGedsGekGyfvms 398
                   +  +H ++++g  + +++ ++ w + nsW +  G++Gy+ ++
  MMETSP1325-20131115|13876_1  19 PGSSDHIVLIVGYGE-EEDGTEYWILRNSWSKYWGTDGYMKIA 60 
                  56789*********9.6666789****************8654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 397.69
//
Query:       MMETSP1325-20131115|13877_1  [L=155]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.03   13.1   5.1      0.038   12.8   3.5    1.1  1  PF02535.17 ZIP Zinc transporter
       0.82    8.8   3.0       0.92    8.6   2.1    1.1  1  PF03824.11 High-affinity nickel-transport protein
       0.84    7.6  25.0        0.9    7.5  17.4    1.0  1  PF09770.4  Topoisomerase II-associated protein PAT1
        1.8    8.2  14.3        1.9    8.1   9.9    1.0  1  PF03153.8  Transcription factor IIA, alpha/beta subunit
        6.5    5.8  23.2         10    5.2  16.1    1.3  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF02535.17  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   3.5   1.4e-05     0.038     134     174 ..      50     136 ..      19     145 .. 0.54

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.4e-05
   PF02535.17 134 s..............................................kvenaeseeeeteeeesdhdheskeksesdkeselaaavi 174
                  +                                              +++++++++ + ++++ ++++++++ + s +++++a ++i
  MMETSP1325-20131115|13877_1  50 PapssayserlhhqqaqfqpqlqtqpqpqsravalqplaqsqpqsvvHHQRQHQHQAQPQHQHQHQHQHHQQLGMSGEGQSGAVDLI 136
                  233345566677777777777777777777777888888777655554444455555555555555555555555555555544455 PP

>> PF03824.11  High-affinity nickel-transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.1   0.00033      0.92     120     157 ..      94     130 ..      54     145 .. 0.75

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00033
   PF03824.11 120 aalakrgllsrilgklfrlvtkhwhmypvgflfGlGfd 157
                  ++ ++++ +++  ++ ++++ +h h+ ++g + G+G+ 
  MMETSP1325-20131115|13877_1  94 SVVHHQRQHQHQAQPQHQHQHQHQHHQQLG-MSGEGQS 130
                  22333478889999999*************.6777764 PP

>> PF09770.4  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  17.4   0.00033       0.9     255     334 ..      43     121 ..       6     136 .. 0.55

  Alignments for each domain:
  == domain 1    score: 7.5 bits;  conditional E-value: 0.00033
    PF09770.4 255 qmppqpvqppqqqqqqvlklpqaqppplqqlsaspqlaqqqlaslplpqqpqqkalvqqeqgqqeanqfreqlvqleqqe 334
                   +p ++ ++p+ +  + l+++qaq+ p+ q +++pq+++ +l++l+++ qpq+   +q+++++q ++q+++q +++++q+
  MMETSP1325-20131115|13877_1  43 TPPTPSSPAPSSAYSERLHHQQAQFQPQLQTQPQPQSRAVALQPLAQS-QPQSVVHHQRQHQHQAQPQHQHQHQHQHHQQ 121
                  222233333334444566666777777666666666666444444443.3433444444433333333333333333332 PP

>> PF03153.8  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   9.9   0.00068       1.9      93     181 ..      37     122 ..       4     154 .. 0.41

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00068
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXX CS
    PF03153.8  93 ssaaaslpagvpaestiktepgqllkvevpvmvtqnsanse.lqqpa.qqraaqqlqqslgapassqasslqqqpaplksneesqeqqqpg 181
                  +++++s+p++     +  ++p+  +  ++ + + q +++ + + qp+ +  a+q l qs+ ++    + ++q+q++p ++++++++++q+ 
  MMETSP1325-20131115|13877_1  37 PQSTPSTPPT-----PSSPAPSSAYSERLHHQQAQFQPQLQtQPQPQsRAVALQPLAQSQPQSVVHHQRQHQHQAQPQHQHQHQHQHHQQL 122
                  2333333333.....2223333333333333333322222211111102223333333333333333333333333333322222222222 PP

>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  16.1    0.0037        10     245     323 ..      30     114 ..       2     138 .. 0.29

  Alignments for each domain:
  == domain 1    score: 5.2 bits;  conditional E-value: 0.0037
                  XXXXXXXXXXXXXXXXXX.............................................................................XXXXXXXXX CS
   PF04652.11 245 spdeseasnkdsqlPsaPty.......aqknssssqsvfPpsseeeetssssppsteapssppvqapsapakp..................slssakPtaqsas 323
                  s  +s++++++++ P++P+        +++ + ++ +++P+ +               +++p+       a+                    + +a+P++q++ 
  MMETSP1325-20131115|13877_1  30 SDSDSDGPQSTPSTPPTPSSpapssaySERLHHQQAQFQPQLQT--------------QPQPQS-----RAVAlqplaqsqpqsvvhhqrqHQHQAQPQHQHQH 114
                  22222222233333333322222222222222222222222222..............111111.....11111111111111000000001111222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1227  (0.0897455); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                        50  (0.00365711); expected 13.7 (0.001)
Passed Fwd filter:                        13  (0.000950848); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.43s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 742.87
//
Query:       MMETSP1325-20131115|13882_1  [L=242]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-57  192.3   0.5    3.6e-57  191.3   0.4    1.5  1  PF01092.14 Ribosomal protein S6e


Domain annotation for each model (and alignments):
>> PF01092.14  Ribosomal protein S6e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.3   0.4   2.6e-61   3.6e-57       1     127 []       1     127 [.       1     127 [. 0.99

  Alignments for each domain:
  == domain 1    score: 191.3 bits;  conditional E-value: 2.6e-61
   PF01092.14   1 lklnvsyPatGtqklievddeeklrvfvekrlgeevdgdavGdelkGyvlkiaGGndkqGfPmkqdvltstrvrlllskGhscyrPrrdGerkrksvrGaivdadlsvlalkivkkGekdipgllde 127
                  +kln++yPatG+qk i++dde+klr +++ r+++evdg a+G+e++Gyv++i+GGndkqGfPmkq+vlt+trvrlllskG scyr r+ GerkrksvrG+iv+adl+vl+l+++kkG+ +i+gl+d+
  MMETSP1325-20131115|13882_1   1 MKLNIAYPATGNQKDIDIDDERKLRALYDMRISQEVDGSALGEEYAGYVFRISGGNDKQGFPMKQGVLTNTRVRLLLSKGLSCYRQRKRGERKRKSVRGCIVGADLAVLNLVVTKKGDAEIEGLTDT 127
                  8****************************************************************************************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1035  (0.0757022); expected 273.4 (0.02)
Passed bias filter:                      430  (0.0314511); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.40s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 1137.09
//
Query:       MMETSP1325-20131115|13890_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-16   58.1   0.4    5.7e-16   57.6   0.3    1.2  1  PF01423.17 LSM domain
  ------ inclusion threshold ------
      0.095   11.7   0.1      0.099   11.7   0.0    1.1  1  PF06224.7  Protein of unknown function (DUF1006)


Domain annotation for each model (and alignments):
>> PF01423.17  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.3   8.4e-20   5.7e-16       4      64 ..      24      95 ..      21      98 .. 0.94

  Alignments for each domain:
  == domain 1    score: 57.6 bits;  conditional E-value: 8.4e-20
                 HHHTTS-EEEEETTTEEEE-EEEEEETTCEEEEEEEEEEE...EEE.............EE.EEEEEGGGEE CS
   PF01423.17  4 qelinkrVtvelkngreveGtLkafDkfmNlvLrdvtetwkrkkknk...........relgqiliRGeniv 64
                 + ++++r++v+++++re++G+L+a+D+++N+vL +v+et++ ++ ++           r+++++++RG+ ++
  MMETSP1325-20131115|13890_1 24 RLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGEVEETVTTQEIDEdtseeiirtskRMIEMLFVRGDVVI 95
                 56789***********************************9999999**********************886 PP

>> PF06224.7  Protein of unknown function (DUF1006)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.5e-05     0.099      94     161 ..      39      97 ..       9     116 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 1.5e-05
    PF06224.7  94 rargldardaaalaaavlerlaaegpltareleaalarrgwwgwkkpskaskralellflegelvvar 161
                  r ++   +++++ +  vl ++  e+ +t++e++++ +++           skr++e+lf +g++v+  
  MMETSP1325-20131115|13890_1  39 RELRGKLHAYDQHLNMVLGEV--EETVTTQEIDEDTSEE---IIR----TSKRMIEMLFVRGDVVIXS 97 
                  336667788888899999999..99**********9998...555....99**************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       577  (0.042203); expected 273.4 (0.02)
Passed bias filter:                      516  (0.0377414); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 534.90
//
Query:       MMETSP1325-20131115|13891_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.55
# Mc/sec: 309.35
//
Query:       MMETSP1325-20131115|13892_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   12.9   0.0      0.039   12.5   0.0    1.2  1  PF04204.11 Homoserine O-succinyltransferase
       0.25   10.1   2.6          6    5.6   0.2    2.1  2  PF00365.15 Phosphofructokinase


Domain annotation for each model (and alignments):
>> PF04204.11  Homoserine O-succinyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.7e-06     0.039     171     220 ..      76     125 ..      71     139 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 5.7e-06
   PF04204.11 171 vlkekspllrgfddeflvphsRytevkeeeieekaelevLaeseeaGvll 220
                  +l+ + +l+r++ + + vph+  tev++ e+ +++ + vLa++ +a + +
  MMETSP1325-20131115|13892_1  76 LLEVHRRLVRAVAKLVEVPHAHLTEVTRVELIKQNAVVVLATGVTAATGV 125
                  5678999*********************************9986654433 PP

>> PF00365.15  Phosphofructokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.1    0.0013       9.2     235     256 ..      31      52 ..      20      58 .. 0.83
   2 ?    5.6   0.2   0.00088         6     212     253 ..     107     147 ..      86     149 .] 0.81

  Alignments for each domain:
  == domain 1    score: 5.0 bits;  conditional E-value: 0.0013
                  HHHHHHH-.---EEEEE---TT CS
   PF00365.15 235 vkklkkerlgldtrvtvLGhvq 256
                   ++l++  l +d  vtvLGhv 
  MMETSP1325-20131115|13892_1  31 HRHLRELALAHDLEVTVLGHVD 52 
                  5677888899**********96 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.00088
                  ---SEEEEEE-----..H..HHHHHHHHHH-.---EEEEE-- CS
   PF00365.15 212 gkrsaivivaegvidlkaitseavkklkkerlgldtrvtvLG 253
                   k++a+v++a gv+ ++ + +  + +    r +l tr+tvLG
  MMETSP1325-20131115|13892_1 107 IKQNAVVVLATGVTAATGVLAVLADTAMAGR-HLATRLTVLG 147
                  58899**********9997776666665555.9********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       482  (0.0352545); expected 273.4 (0.02)
Passed bias filter:                      305  (0.0223084); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.53
# Mc/sec: 673.69
//
Query:       MMETSP1325-20131115|13894_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-35  119.6   0.1    3.7e-35  119.4   0.1    1.0  1  PF07189.6 Splicing factor 3B subunit 10 (SF3b10)


Domain annotation for each model (and alignments):
>> PF07189.6  Splicing factor 3B subunit 10 (SF3b10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.1   2.7e-39   3.7e-35       1      78 [.       4      81 ..       4      82 .. 0.98

  Alignments for each domain:
  == domain 1    score: 119.4 bits;  conditional E-value: 2.7e-39
    PF07189.6  1 dklriqqqlehlqskyiGtGhadttkeewltnihRDtlsSligHsslLsYialaenepvakvrvqmlqkmlqpvgppp 78
                 d+ +i++  +h+q ky+GtGh+d+tk+ew++n+hRDt++S+igH+++LsY+a+a+n+++ +vr+q+l+kmlqp+g pp
  MMETSP1325-20131115|13894_1  4 DRQNINKSWDHIQNKYVGTGHSDMTKFEWASNQHRDTAASHIGHYDMLSYFAVAQNDSIGRVRYQLLEKMLQPCGAPP 81
                 899*************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.57
# Mc/sec: 363.59
//
Query:       MMETSP1325-20131115|13896_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.40s 00:00:00.76 Elapsed: 00:00:00.55
# Mc/sec: 418.27
//
Query:       MMETSP1325-20131115|13898_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.072   12.7   0.1       0.17   11.5   0.1    1.5  1  PF08183.6 Stage V sporulation protein family


Domain annotation for each model (and alignments):
>> PF08183.6  Stage V sporulation protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   1.2e-05      0.17       9      22 ..      71      84 ..      71      85 .. 0.94

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 1.2e-05
    PF08183.6  9 pkfvGGvVkklLgs 22
                 + fvGG V +l+gs
  MMETSP1325-20131115|13898_1 71 RTFVGGCVSVLMGS 84
                 78***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.57
# Mc/sec: 413.17
//
Query:       MMETSP1325-20131115|13899_1  [L=195]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-52  174.3   0.1    1.6e-51  173.4   0.1    1.4  1  PF01592.11 NifU-like N terminal domain
  ------ inclusion threshold ------
      0.044   12.8   0.1      0.067   12.2   0.1    1.2  1  PF11678.3  Protein of unknown function (DUF3274)


Domain annotation for each model (and alignments):
>> PF01592.11  NifU-like N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.4   0.1   2.3e-55   1.6e-51       2     125 ..      47     170 ..      46     172 .. 0.97

  Alignments for each domain:
  == domain 1    score: 173.4 bits;  conditional E-value: 2.3e-55
                  CCHHHHHHHHS-S-----TTSE...-EEEEE-TT---EEEEEEEE-TTT-BEEEEEEEEE--HHHHHHHHHHHHHH---BHHHHHHHHHHHHHHHTT---GCSCCCCH---HHHHHHHCCCCCCHH CS
   PF01592.11   2 ysdkvldhfknPrnvGvleeada..gvgevgapacGDalrLqlkvdeetdriedakFktfGCgsaiAsssaltelvkgktleeAlkitnkdiaeelgglpkekmhcsvlaeealkaavakYkgkkl 125
                  y+d ++dh++nPrnvG+l+++ +  g+g vgapacGD+++Lq+kvd++ ++i+++kFktfGCgsaiAsss++te++ gk+++e+l+i+nkdia  l+ lp++k+hcs+lae+a+kaav++Yk+k+ 
  MMETSP1325-20131115|13899_1  47 YHDTIIDHYENPRNVGSLDKNADdvGTGLVGAPACGDVMKLQIKVDDN-GVITESKFKTFGCGSAIASSSVATEWIEGKSIDEVLSIKNKDIAGFLK-LPPVKLHCSMLAEDAIKAAVNDYKQKNG 170
                  9*******************99989*********************86.************************************************.*************************986 PP

>> PF11678.3  Protein of unknown function (DUF3274)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   9.9e-06     0.067     160     218 ..      10      65 ..       2      73 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 9.9e-06
    PF11678.3 160 lrvkestssssgtivvqReeTpnEvrarlqkdedaleensYHSavlrspenhRwvtAmD 218
                   r+++  +  ++++   R +    +r r+ +d+  + + sYH +++   en R v  +D
  MMETSP1325-20131115|13899_1  10 PRCHSAAT--TMMMRTVRGAVATAARGRMGADKVVF-ARSYHDTIIDHYENPRNVGSLD 65 
                  44444443..5777788999***********99987.9****************98887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      312  (0.0228204); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 994.23
//
Query:       MMETSP1325-20131115|13901_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                       99  (0.00724108); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 342.34
//
Query:       MMETSP1325-20131115|13900_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-18   65.0   0.0    5.2e-18   64.6   0.0    1.2  1  PF04564.10 U-box domain
    1.6e-08   33.8   0.0    2.7e-08   33.1   0.0    1.3  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    7.3e-06   25.2   0.0    1.2e-05   24.5   0.0    1.3  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.21   11.5   0.0    1.4  1  PF08823.6  Putative peptidoglycan binding domain
       0.14   11.9   0.0       0.18   11.5   0.0    1.2  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.0   1.9e-21   5.2e-18       2      66 ..      31      94 ..      30      99 .. 0.96

  Alignments for each domain:
  == domain 1    score: 64.6 bits;  conditional E-value: 1.9e-21
                 -GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHH CS
   PF04564.10  2 PdefldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKekIdk 66
                 Pd +++pit  +mkdPvil++g+t++r++i ++l+  ++t+P t+  l+ ++lipn  l+ +I++
  MMETSP1325-20131115|13900_1 31 PDSYKCPITGDVMKDPVILSDGHTYERAAISRWLKG-HSTSPKTNLILKGKNLIPNHGLRSAIEE 94
                 9***********************************.**************************97 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   9.8e-12   2.7e-08      11      48 ..      34      68 ..      26      80 .. 0.86

  Alignments for each domain:
  == domain 1    score: 33.1 bits;  conditional E-value: 9.8e-12
                 -B-TTT-S.-SS....EEEES---EEEHHHHHHHHHHHH CS
    PF13445.1 11 faCpiske.qsteqnpPvvLpCGhvisrealeklakggr 48
                   Cpi+++ +++    Pv+L  Gh+++r a+++++kg++
  MMETSP1325-20131115|13900_1 34 YKCPITGDvMKD----PVILSDGHTYERAAISRWLKGHS 68
                 56********99....********************543 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   4.5e-09   1.2e-05      11      46 ..      33      67 ..      31      78 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.5 bits;  conditional E-value: 4.5e-09
                 X-B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT CS
    PF11789.3 11 slkCpltlkpfkePvtskkCnHvFEkeaIlkmlkrk 46
                 s kCp+t +++k+Pv+     H++E+ aI + lk +
  MMETSP1325-20131115|13900_1 33 SYKCPITGDVMKDPVILSD-GHTYERAAISRWLKGH 67
                 679************9877.9**********99654 PP

>> PF08823.6  Putative peptidoglycan binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   7.7e-05      0.21      15      34 ..      90     109 ..      85     115 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 7.7e-05
    PF08823.6  15 edvaeevqaaLsrLGyydge 34 
                   + +e+vq+aLs++G+ d e
  MMETSP1325-20131115|13900_1  90 SAIEESVQKALSEWGFNDAE 109
                  5679************5544 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   6.7e-05      0.18       2      37 ..      33      67 ..      32      79 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 6.7e-05
    PF13923.1  2 rfsCpiCleelenpviltpCgHlyCkkCieqwleks 37
                 +++Cpi  + +++pvi +  gH y +  i++wl+ +
  MMETSP1325-20131115|13900_1 33 SYKCPITGDVMKDPVI-LSDGHTYERAAISRWLKGH 67
                 689***********76.***************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       249  (0.0182124); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 565.54
//
Query:       MMETSP1325-20131115|13893_1  [L=508]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-22   79.9   0.0    1.7e-22   79.5   0.0    1.1  1  PF09192.5 Actin-fragmin kinase, catalytic


Domain annotation for each model (and alignments):
>> PF09192.5  Actin-fragmin kinase, catalytic
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   0.0   1.3e-26   1.7e-22      35     275 .]     107     369 ..      82     369 .. 0.79

  Alignments for each domain:
  == domain 1    score: 79.5 bits;  conditional E-value: 1.3e-26
    PF09192.5  35 ssknnsgiillvtfnnnkeeqvvlKssstiaqevyasvLekiLklpipemRlidssneEftemsenll..........katkesdqlfeiikselekafllimeyvnGktlselnkk....eyf.sgekkgekklkqlGkllalDiiinNsdrlpleilnwnnsgnfsnillydePdGwyfsiinsnilsldessFtigYrealnrvklllfsifq...npstesvq.............ikefrdilskktsidlssssvlsvqkgiakgi 275
                  ss++ +g++++ t  +     +v+K+ s+i+qe+ya + + + +l  p +R  +++++E+  ++  l           +   ++ ++++   s l++++l++me+v+G t+ e            ++ + g+++l++lG l+a+D + nNsdr  + ++ ++  gn  nil++   dG ++  i+++  sld        ++ ++r+++ l + ++    p++                 + e+ + l+++t  d++ ++   +++g+ +g+
  MMETSP1325-20131115|13893_1 107 SSEGANGVCFVRTDRG----GLVVKGCSSIVQEMYAAEVARMVGLVCPAVRQTSYEDPEWRLIKATLMrvatldcstdELVRSHIRVQQQLGSALNRPNLMVMELVPGATMLEGCPPsvaaGLLdASTRAGRRRLRELGALVAMDALLNNSDRAVCGLFDND--GNARNILFTSGDDGHTV-AIDQACCSLDPENAI--SKRLVDRYHQRLQKFLKdlfAPTAGGAAeaaagsggsgnsaVGEVAQFLYNETVHDVGDEGRAMLLQGLREGV 369
                  335799**********....9*******************************************99997654432211111122234455556778888************996544344444414455699**************************7766..***********888876.689999999988333..4888999999999888844445544444788899999999999999999999999999999999999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.82u 0.36s 00:00:01.18 Elapsed: 00:00:00.57
# Mc/sec: 2098.88
//
Query:       MMETSP1325-20131115|13905_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        79  (0.00577823); expected 273.4 (0.02)
Passed bias filter:                       79  (0.00577823); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.47
# Mc/sec: 280.42
//
Query:       MMETSP1325-20131115|13906_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.37s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 542.57
//
Query:       MMETSP1325-20131115|13911_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-13   49.5  12.2    2.3e-13   49.5   8.5    2.0  2  PF13639.1  Ring finger domain
    1.8e-11   43.5  12.6    3.8e-11   42.5   8.8    1.5  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    5.7e-10   38.5  11.3    1.3e-09   37.4   7.9    1.5  1  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    1.5e-08   34.0  14.4    1.5e-08   34.0  10.0    2.1  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    2.3e-06   27.5   9.8    6.2e-06   26.1   6.8    1.7  1  PF12678.2  RING-H2 zinc finger
    8.5e-05   21.9   6.1    0.00034   20.0   4.4    1.8  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
     0.0002   21.0   4.1    0.00041   20.0   2.8    1.5  1  PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
  ------ inclusion threshold ------
      0.093   12.5   0.0       0.15   11.8   0.0    1.3  1  PF04564.10 U-box domain
       0.14   11.5   7.0       0.25   10.7   4.9    1.4  1  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
       0.31   10.4  13.8       0.12   11.8   7.7    1.8  2  PF02891.15 MIZ/SP-RING zinc finger
       0.32   10.7   4.5       0.88    9.2   3.1    1.7  1  PF05883.6  Baculovirus U-box/Ring-like domain
       0.59    9.4   5.0       0.76    9.0   3.4    1.2  1  PF05605.7  Drought induced 19 protein (Di19)
       0.99    8.8  10.7        8.7    5.8   7.4    2.2  1  PF14447.1  Prokaryotic RING finger family 4
        1.1    8.9   8.6        4.8    6.9   6.0    1.9  2  PF12773.2  Double zinc ribbon
        2.2    7.6   4.4        8.4    5.8   1.2    2.4  2  PF04423.9  Rad50 zinc hook motif


Domain annotation for each model (and alignments):
>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       1.2   1.1e+03      26      30 ..      61      65 ..      50      73 .. 0.57
   2 !   49.5   8.5   2.5e-16   2.3e-13       2      45 ..      95     135 ..      94     136 .. 0.95

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 1.2
    PF13639.1 26 HeeCl 30
                 H +Cl
  MMETSP1325-20131115|13911_1 61 HLRCL 65
                 44555 PP

  == domain 2    score: 49.5 bits;  conditional E-value: 2.5e-16
    PF13639.1   2 eCaiCldelsegeevvrlpCgHvfHeeCldewlrssnsCPlCrk 45 
                  +C+iC+d++    ++v l+C H+f+eeC++ew++++nsCPlCr+
  MMETSP1325-20131115|13911_1  95 DCPICYDSM---VCPVSLNCTHMFCEECVSEWVEKNNSCPLCRA 135
                  7********...58*****************************8 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   8.8   4.2e-14   3.8e-11       4      45 ..      95     134 ..      93     135 .. 0.95

  Alignments for each domain:
  == domain 1    score: 42.5 bits;  conditional E-value: 4.2e-14
    PF13923.1   4 sCpiCleelenpviltpCgHlyCkkCieqwlekskkkCPiCr 45 
                   CpiC++ +  p ++++C H++C++C+++w+ek +++CP+Cr
  MMETSP1325-20131115|13911_1  95 DCPICYDSMVCP-VSLNCTHMFCEECVSEWVEK-NNSCPLCR 134
                  5***********.68******************.*******9 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   7.9   1.4e-12   1.3e-09       4      47 ..      95     137 ..      93     139 .. 0.95

  Alignments for each domain:
  == domain 1    score: 37.4 bits;  conditional E-value: 1.4e-12
    PF13920.1   4 tCvvClereadvlllpCgHlclCeeCaerllkrkkkCpiCrspi 47 
                   C++C+++  + + l C H+ +CeeC++++++++++Cp+Cr+++
  MMETSP1325-20131115|13911_1  95 DCPICYDSMVCPVSLNCTHM-FCEECVSEWVEKNNSCPLCRAEV 137
                  6*******************.********************998 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.35   3.2e+02      23      38 ..      50      64 ..      50      66 .. 0.83
   2 !   34.0  10.0   1.7e-11   1.5e-08       1      41 []      96     133 ..      96     133 .. 0.98

  Alignments for each domain:
  == domain 1    score: 0.9 bits;  conditional E-value: 0.35
                 CHHHHHHHCST----- CS
   PF00097.20 23 skCirkilksrkkvkC 38
                 ++C++ ++  +k+  C
  MMETSP1325-20131115|13911_1 50 YMCLKAMVL-SKHLRC 64
                 589999999.888888 PP

  == domain 2    score: 34.0 bits;  conditional E-value: 1.7e-11
                  -TTTSSS-SSEE.BSCTS-EE-CHHHHHHHCST-----TTT CS
   PF00097.20   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                  CpiC + ++ p+ +l+C+H fC++C++++++  k+++CPlC
  MMETSP1325-20131115|13911_1  96 CPICYDSMVCPV-SLNCTHMFCEECVSEWVE--KNNSCPLC 133
                  ************.******************..9999**** PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   6.8   6.8e-09   6.2e-06      36      75 .]      96     134 ..      78     134 .. 0.79

  Alignments for each domain:
  == domain 1    score: 26.1 bits;  conditional E-value: 6.8e-09
    PF12678.2  36 ckapgksdecpvawgeCgHaFHlhCiskWlktrktCPlcr 75 
                  c    +s  cpv + +C+H F  +C+s+W++++++CPlcr
  MMETSP1325-20131115|13911_1  96 CPICYDSMVCPVSL-NCTHMFCEECVSEWVEKNNSCPLCR 134
                  22222223599987.6***********************8 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   4.4   3.7e-07   0.00034      13      48 ..      96     128 ..      94     133 .. 0.88
   2 ?   -0.9   0.1       1.2   1.1e+03      13      20 ..     130     138 ..     125     143 .. 0.75

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 3.7e-07
                  -TTT-S.-SS....EEEES---EEEHHHHHHHHHHHH CS
    PF13445.1  13 Cpiske.qsteqnpPvvLpCGhvisrealeklakggr 48 
                  Cpi+ + +      Pv L+C h +++e+ ++++++++
  MMETSP1325-20131115|13911_1  96 CPICYDsM----VCPVSLNCTHMFCEECVSEWVEKNN 128
                  ********....55*******************9543 PP

  == domain 2    score: -0.9 bits;  conditional E-value: 1.2
                  -TTT-S.-S CS
    PF13445.1  13 Cpiske.qs 20 
                  Cp +++ + 
  MMETSP1325-20131115|13911_1 130 CPLCRAeVA 138
                  ***998665 PP

>> PF12861.2  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   2.8   4.4e-07   0.00041      36      80 ..      94     136 ..      86     140 .. 0.77

  Alignments for each domain:
  == domain 1    score: 20.0 bits;  conditional E-value: 4.4e-07
    PF12861.2  36 psckfpGdd..cplvlGkckhnfhlhcilkwletetskglcpmcrqt 80 
                  p+c +  d   cp+ l +c+h+f + c+ +w+e+++s   cp+cr +
  MMETSP1325-20131115|13911_1  94 PDCPICYDSmvCPVSL-NCTHMFCEECVSEWVEKNNS---CPLCRAE 136
                  6666655543388766.7**************99865...9999976 PP

>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00017      0.15       7      57 ..      96     146 ..      94     148 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00017
                  -TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--.GGGSEE- CS
   PF04564.10   7 dpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplt.eeelipn 57 
                  +pi +  m +Pv l   +++  + + +++++ ++++P+ r+ ++  +++ p+
  MMETSP1325-20131115|13911_1  96 CPICYDSMVCPVSLNCTHMFCEECVSEWVEK-NNSCPLCRAEVArPANVAPH 146
                  9******************************.*******7765415566665 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.9   0.00027      0.25      13      56 ..      95     133 ..      86     134 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00027
                  B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT--B------- CS
    PF11789.3  13 kCpltlkpfkePvtskkCnHvFEkeaIlkmlkrkkkvkCPvaGC 56 
                   Cp+  + +  Pv+  +C H+F +e + + +  +k+  CP+  C
  MMETSP1325-20131115|13911_1  95 DCPICYDSMVCPVS-LNCTHMFCEECVSEWV--EKNNSCPL--C 133
                  6***********96.68**************..88899**9..7 PP

>> PF02891.15  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       5.9   5.4e+03      22      27 ..      60      65 ..      59      68 .. 0.77
   2 ?   11.8   7.7   0.00013      0.12       4      49 ..      95     135 ..      93     136 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.2 bits;  conditional E-value: 5.9
   PF02891.15 22 kHiqCf 27
                 kH+ C 
  MMETSP1325-20131115|13911_1 60 KHLRCL 65
                 688885 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00013
   PF02891.15   4 kCplslsrisiPvrgekCkHiqCfdlks.flesnertktWnCPvCsk 49 
                   Cp++++ +  Pv + +C+H+ C ++ s ++e n+     +CP+C++
  MMETSP1325-20131115|13911_1  95 DCPICYDSMVCPV-SLNCTHMFCEECVSeWVEKNN-----SCPLCRA 135
                  6************.789********9542455555.....8****87 PP

>> PF05883.6  Baculovirus U-box/Ring-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.1   0.00097      0.88      47      76 ..     105     134 ..      86     138 .. 0.79

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00097
    PF05883.6  47 ekgtldleklfhkeClkrfkrekkrDPfkR 76 
                  +   l+  ++f++eC++ + ++++  P  R
  MMETSP1325-20131115|13911_1 105 CPVSLNCTHMFCEECVSEWVEKNNSCPLCR 134
                  4668999************99999888766 PP

>> PF05605.7  Drought induced 19 protein (Di19)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   3.4   0.00084      0.76      36      75 ..      95     139 ..      72     149 .. 0.81

  Alignments for each domain:
  == domain 1    score: 9.0 bits;  conditional E-value: 0.00084
    PF05605.7  36 pCPfCsedf..divslCaHldeeHple...akngvCPvCakrvgk 75 
                   CP C++ +   +   C+H+  e ++     kn  CP+C + v++
  MMETSP1325-20131115|13911_1  95 DCPICYDSMvcPVSLNCTHMFCEECVSewvEKNNSCPLCRAEVAR 139
                  5******972245556*****99999734459*******999975 PP

>> PF14447.1  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   7.4    0.0096       8.7      21      50 ..     107     138 ..      95     142 .. 0.81

  Alignments for each domain:
  == domain 1    score: 5.8 bits;  conditional E-value: 0.0096
    PF14447.1  21 vllpCgHlvpdetFd..lerYsgCPfCgtrle 50 
                  v l C H+ ++e+    +e+ + CP+C + + 
  MMETSP1325-20131115|13911_1 107 VSLNCTHMFCEECVSewVEKNNSCPLCRAEVA 138
                  6799*********87447899******98776 PP

>> PF12773.2  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   6.6      0.16   1.5e+02      14      49 ..      95     133 ..      81     133 .. 0.74
   2 ?    6.9   6.0    0.0053       4.8       4      47 ..     105     145 ..      96     146 .. 0.74

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.16
    PF12773.2  14 fCpqCgaklk...eataeevlCpsCgesvspkarfCpnC 49 
                   Cp C  ++    + + ++++C++C ++  +k++ Cp C
  MMETSP1325-20131115|13911_1  95 DCPICYDSMVcpvSLNCTHMFCEECVSEWVEKNNSCPLC 133
                  577777777667733344588999999988888889888 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0053
    PF12773.2   4 CgaenpsgarfCpqCgaklkeataeevlCpsCgesvspkarfCp 47 
                  C  +++ +  fC++C ++     +++ +Cp C ++v   a+++p
  MMETSP1325-20131115|13911_1 105 CPVSLNCTHMFCEECVSEWV---EKNNSCPLCRAEVARPANVAP 145
                  44447777889*****9999...33578*****99988888776 PP

>> PF04423.9  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.16   1.5e+02      15      26 ..      87      99 ..      86     103 .. 0.80
   2 ?    5.8   1.2    0.0092       8.4      18      28 ..     125     135 ..     114     137 .. 0.77

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.16
                 HHTT---.--S-- CS
    PF04423.9 15 elkeakg.cCPvC 26
                 e++ea+   CP+C
  MMETSP1325-20131115|13911_1 87 EVAEAGTpDCPIC 99
                 678888889**** PP

  == domain 2    score: 5.8 bits;  conditional E-value: 0.0092
                  T-----S---- CS
    PF04423.9  18 eakgcCPvCgr 28 
                  e +++CP+C  
  MMETSP1325-20131115|13911_1 125 EKNNSCPLCRA 135
                  4455*****76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       575  (0.0420568); expected 273.4 (0.02)
Passed bias filter:                      367  (0.0268432); expected 273.4 (0.02)
Passed Vit filter:                        44  (0.00321826); expected 13.7 (0.001)
Passed Fwd filter:                        18  (0.00131656); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.48u 0.37s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 732.73
//
Query:       MMETSP1325-20131115|13917_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-08   32.2  15.3    2.1e-05   24.4   5.4    2.2  2  PF07974.8  EGF-like domain
    9.2e-05   22.2  11.8     0.0075   16.1   4.0    2.3  2  PF00008.22 EGF-like domain
    0.00095   18.9  14.6      0.002   17.8  10.2    1.5  1  PF00053.19 Laminin EGF-like (Domains III and V)
  ------ inclusion threshold ------
       0.03   14.0  12.2       0.06   13.1   8.5    1.6  1  PF00131.15 Metallothionein
      0.084   12.8   2.1      0.084   12.8   1.5    2.2  2  PF12661.2  Human growth factor-like EGF
        0.4   10.5  12.2        6.9    6.6   0.1    3.0  2  PF01414.14 Delta serrate ligand
        1.6    8.7  12.8       0.25   11.3   0.6    2.2  2  PF12955.2  Domain of unknown function (DUF3844)


Domain annotation for each model (and alignments):
>> PF07974.8  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   5.4   1.1e-08   2.1e-05       6      32 .]      17      43 ..      10      43 .. 0.90
   2 !   12.7   0.6   4.9e-05     0.095       1      15 [.      48      64 ..      48      68 .. 0.82

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 1.1e-08
    PF07974.8  6 liCgghGtCvkqcgkCvCdsgyqGktC 32
                  +C++ GtC+ ++g+C C+ g+ G+ C
  MMETSP1325-20131115|13917_1 17 YECSNMGTCDYTTGTCTCHEGFEGAAC 43
                 46********88*************** PP

  == domain 2    score: 12.7 bits;  conditional E-value: 4.9e-05
    PF07974.8  1 Csad.g.liCgghGtCv 15
                 C+ d   ++C+ghG C 
  MMETSP1325-20131115|13917_1 48 CPKDmYgNECSGHGECI 64
                 777665789*******8 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   4.0   3.8e-06    0.0075       5      30 ..      18      40 ..      12      41 .. 0.89
   2 !    9.7   0.2   0.00038      0.75       4      14 ..      51      65 ..      48      73 .. 0.77

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 3.8e-06
                 TCSS--EEEEECCTEEEEE--TTCTT CS
   PF00008.22  5 pCsngGtCvdtpgggytCeCpeGytG 30
                  Csn GtC +t     tC+C+eG+ G
  MMETSP1325-20131115|13917_1 18 ECSNMGTCDYTT---GTCTCHEGFEG 40
                 7**********6...*********99 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00038
                 T....TCSS--EEEE CS
   PF00008.22  4 n....pCsngGtCvd 14
                 +     Cs++G+C++
  MMETSP1325-20131115|13917_1 51 DmygnECSGHGECIS 65
                 555559*******97 PP

>> PF00053.19  Laminin EGF-like (Domains III and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8  10.2     1e-06     0.002       3      49 .]      19      63 ..      14      63 .. 0.84

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 1e-06
                 STT-B-CC--B-S----BSBSTTEE---S-E..E----B-TTTTGGGSS CS
   PF00053.19  3 CnphgsssssCdsstgqClCkenveGrkCdr..CkpgyyglpsdsgegC 49
                 C++ g    +Cd +tg+C C+e++eG  C+r  C +  yg++ + + +C
  MMETSP1325-20131115|13917_1 19 CSNMG----TCDYTTGTCTCHEGFEGAACERmaCPKDMYGNECSGHGEC 63
                 55555....*********************888****999976544466 PP

>> PF00131.15  Metallothionein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   8.5   3.1e-05      0.06       4      49 ..      25      69 ..      12      77 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 3.1e-05
   PF00131.15  4 CeCaetgsCkCkdsCkcenCkCtsckKscssckcsgcekCakgCvc 49
                 C+  +tg+C+C+++ ++ +C+   c K   +++csg  +C +  + 
  MMETSP1325-20131115|13917_1 25 CDY-TTGTCTCHEGFEGAACERMACPKDMYGNECSGHGECISMAEA 69
                 443.577*********************************876554 PP

>> PF12661.2  Human growth factor-like EGF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.5   4.3e-05     0.084       1      13 []      31      43 ..      31      43 .. 0.96
   2 ?   -2.3   0.2       2.9   5.8e+03       4      10 ..      48      54 ..      48      57 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.3e-05
    PF12661.2  1 kCqCppGyTGdnC 13
                 +C+C  G++G+ C
  MMETSP1325-20131115|13917_1 31 TCTCHEGFEGAAC 43
                 7**********99 PP

  == domain 2    score: -2.3 bits;  conditional E-value: 2.9
    PF12661.2  4 CppGyTG 10
                 Cp    G
  MMETSP1325-20131115|13917_1 48 CPKDMYG 54
                 7754444 PP

>> PF01414.14  Delta serrate ligand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   5.1     0.016        32      38      63 .]      11      43 ..       4      43 .. 0.63
   2 ?    6.6   0.1    0.0035       6.9      18      33 ..      45      60 ..      44      77 .. 0.77

  Alignments for each domain:
  == domain 1    score: 4.5 bits;  conditional E-value: 0.016
                 -S----EEE-.......----EEE----B---S CS
   PF01414.14 38 ddafghytCd.......eeGeklCleGwkGeeC 63
                 ++a   y+C+       ++G  +C eG++G  C
  MMETSP1325-20131115|13917_1 11 NEAHNEYECSnmgtcdyTTGTCTCHEGFEGAAC 43
                 55555566661111113457789********99 PP

  == domain 2    score: 6.6 bits;  conditional E-value: 0.0035
                 X----TTEE-----EE CS
   PF01414.14 18 rvvCdenYygerCekf 33
                 r+ C +  yg++C+ +
  MMETSP1325-20131115|13917_1 45 RMACPKDMYGNECSGH 60
                 789**********976 PP

>> PF12955.2  Domain of unknown function (DUF3844)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   4.2     0.096   1.9e+02      29      61 ..      13      45 ..       4      53 .. 0.57
   2 ?   11.3   0.6   0.00013      0.25      12      28 ..      54      70 ..      44      76 .. 0.78

  Alignments for each domain:
  == domain 1    score: 2.1 bits;  conditional E-value: 0.096
    PF12955.2 29 kedcyaCkCketvekkksedgktvkwgGeaCek 61
                 +++ y+C+ + t++ ++ + + +  + G+aCe+
  MMETSP1325-20131115|13917_1 13 AHNEYECSNMGTCDYTTGTCTCHEGFEGAACER 45
                 345566666666555555444555566666655 PP

  == domain 2    score: 11.3 bits;  conditional E-value: 0.00013
    PF12955.2 12 TnsCsghGecvkksksk 28
                  n+CsghGec++ ++++
  MMETSP1325-20131115|13917_1 54 GNECSGHGECISMAEAA 70
                 599*******9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       431  (0.0315243); expected 273.4 (0.02)
Passed bias filter:                      196  (0.0143359); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 389.41
//
Query:       MMETSP1325-20131115|13927_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-05   22.4   4.4    4.3e-05   22.3   3.0    1.0  1  PF07690.11 Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.14   11.3   0.0       0.18   11.0   0.0    1.1  1  PF01725.11 Ham1 family


Domain annotation for each model (and alignments):
>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   3.0   6.2e-09   4.3e-05     121     168 ..      18      67 ..      13      90 .. 0.73

  Alignments for each domain:
  == domain 1    score: 22.3 bits;  conditional E-value: 6.2e-09
   PF07690.11 121 gralgllsagfslGailgpllggllasslgWrav..Flilailsllaavl 168
                  g ++++  +++slG+++gpl+g +l+++lg +a   F++ a+l+++a+v 
  MMETSP1325-20131115|13927_1  18 GAVFAVSDSATSLGFVIGPLAGTWLVEALGSSAFgfFIATAGLGAMALVY 67 
                  7899999***********************66553355555555555552 PP

>> PF01725.11  Ham1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.6e-05      0.18     108     151 ..      10      53 ..       2      65 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 2.6e-05
   PF01725.11 108 ledrkakfvcvialadpdgkvevfeGeveGeiaeeprgeggfGY 151
                  led +a+f +v+a+ d+ +++ ++ G + G+ + e  g++ fG+
  MMETSP1325-20131115|13927_1  10 LEDASATFGAVFAVSDSATSLGFVIGPLAGTWLVEALGSSAFGF 53 
                  5999***************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 440.93
//
Query:       MMETSP1325-20131115|13923_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-16   60.2   0.0    1.8e-16   59.6   0.0    1.2  1  PF00338.17 Ribosomal protein S10p/S20e


Domain annotation for each model (and alignments):
>> PF00338.17  Ribosomal protein S10p/S20e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.0   1.3e-20   1.8e-16       1      60 [.      26      86 ..      26      88 .. 0.99

  Alignments for each domain:
  == domain 1    score: 59.6 bits;  conditional E-value: 1.3e-20
                 EEEEEEES-HHHHHHHHHHHHHHHHTST-EEE-EEE-S-EEEEEEEE-S--S-.SSSEEEE CS
   PF00338.17  1 iriklkSydhkllekavkqiieaakrlglkvsgpiplPtkrkrvtvlrsphvd.kksreqf 60
                 iri+l+S + ++lek++++++++a +++l+v gp++lPtk+++vt+++sp+++ ++++++f
  MMETSP1325-20131115|13923_1 26 IRITLTSLNVENLEKVCADLKRGAVEKKLRVAGPVRLPTKKLKVTTRKSPCGEgTNTWDKF 86
                 8**********************************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 737.70
//
Query:       MMETSP1325-20131115|13934_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.30s 00:00:00.64 Elapsed: 00:00:00.45
# Mc/sec: 340.82
//
Query:       MMETSP1325-20131115|13935_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.12   11.6   0.0       0.13   11.5   0.0    1.1  1  PF11881.3 Domain of unknown function (DUF3401)


Domain annotation for each model (and alignments):
>> PF11881.3  Domain of unknown function (DUF3401)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   9.6e-06      0.13      57      98 ..      10      53 ..       2      66 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 9.6e-06
    PF11881.3 57 ssvgsssp..rrsLqRTLSDESiysgrressfassrslleqalp 98
                 + ++++sp  r sL   + DE ++++ r + +   + + eq  p
  MMETSP1325-20131115|13935_1 10 PIPQTHSPfpRNSLEELFADEQLCQNTRLERLCVEELVREQHEP 53
                 4455555444******************9999877668887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       185  (0.0135313); expected 273.4 (0.02)
Passed bias filter:                      177  (0.0129462); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|13948_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       199  (0.0145553); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|13951_1  [L=184]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 918.60
//
Query:       MMETSP1325-20131115|13957_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|13958_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 406.52
//
Query:       MMETSP1325-20131115|13961_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   12.0   2.3       0.13   12.0   1.6    2.3  2  PF08108.6  Halocidin family
       0.42    9.9   3.3       0.55    9.6   2.3    1.1  1  PF01815.11 Rop protein


Domain annotation for each model (and alignments):
>> PF08108.6  Halocidin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.6   1.9e-05      0.13       3      12 ..       7      16 ..       6      19 .. 0.90
   2 ?   -2.1   2.2      0.59     4e+03       4       6 ..      42      44 .]      42      44 .] 0.96

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.9e-05
    PF08108.6  3 LHHGLNCAKG 12
                 LH G NCA G
  MMETSP1325-20131115|13961_1  7 LHRGVNCAHG 16
                 9*******99 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.59
    PF08108.6  4 HHG 6 
                 HHG
  MMETSP1325-20131115|13961_1 42 HHG 44
                 **9 PP

>> PF01815.11  Rop protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.3     8e-05      0.55      19      44 ..      17      42 ..      13      43 .. 0.93

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 8e-05
   PF01815.11 19 sLlLLekLneLdlDeeadlCEkLHeq 44
                  LlLLe+L+e  l ++a+  ++ H++
  MMETSP1325-20131115|13961_1 17 ELLLLEQLEERALADAAEAVDSTHDH 42
                 59**********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 215.18
//
Query:       MMETSP1325-20131115|13971_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       328  (0.0239906); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|13976_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 445.04
//
Query:       MMETSP1325-20131115|13975_1  [L=145]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-11   41.2  10.5    9.3e-11   40.8   7.3    1.3  1  PF04791.11 LMBR1-like membrane protein
  ------ inclusion threshold ------
      0.024   14.2   0.9      0.024   14.2   0.6    2.0  3  PF05814.6  Baculovirus protein of unknown function (DUF843)
      0.027   14.5   1.2      0.027   14.5   0.8    2.1  2  PF13268.1  Protein of unknown function (DUF4059)


Domain annotation for each model (and alignments):
>> PF04791.11  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   7.3     2e-14   9.3e-11     365     469 ..       3     110 ..       1     138 [. 0.82

  Alignments for each domain:
  == domain 1    score: 40.8 bits;  conditional E-value: 2e-14
   PF04791.11 365 llgaavevllifYlmvssvvglyslpf....lrslrlkrkdttmeqilinsgilLvssalPvclnfvgltrfdllgsfskieelqslqwlgnfyvvllynilfviltvl 469
                  l+g    +l+ fYl ++++vgl+++++    +++++++ ++t m+++l+ns+++ ++ +++v++++ ++  ++  +  s +  +q ++ l+++  ++  ni+  il vl
  MMETSP1325-20131115|13975_1   3 LFGVLSVALFSFYLHACVIVGLFKVGVrffcITLHPMRYGKTLMNSFLFNSSVIVLCAIPVVQFCTYAFDGYARYTTISTLLGVQ-VKYLKFLSLFFSNNIFVYILLVL 110
                  6777778899***************9999**********************************************9999554444.44444444444444444444433 PP

>> PF05814.6  Baculovirus protein of unknown function (DUF843)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.3      0.68   3.1e+03      27      40 ..      21      34 ..       4      54 .. 0.63
   2 ?   -2.2   0.2      0.74   3.4e+03      23      32 ..      52      61 ..      32      72 .. 0.62
   3 ?   14.2   0.6   5.4e-06     0.024      23      65 ..      99     142 ..      75     143 .. 0.68

  Alignments for each domain:
  == domain 1    score: -2.1 bits;  conditional E-value: 0.68
    PF05814.6 27 lltllllfvlFiil 40
                 ++ l+ + v F+++
  MMETSP1325-20131115|13975_1 21 IVGLFKVGVRFFCI 34
                 44444444555554 PP

  == domain 2    score: -2.2 bits;  conditional E-value: 0.74
    PF05814.6 23 lsellltlll 32
                  s++++ + +
  MMETSP1325-20131115|13975_1 52 NSSVIVLCAI 61
                 3344444433 PP

  == domain 3    score: 14.2 bits;  conditional E-value: 5.4e-06
    PF05814.6  23 lsellltllllfvlFiillnvyyikteSt.padlytekakkikK 65 
                  ++++++++ll++ +   +   yy ++ S+ +++l+++ +k  kK
  MMETSP1325-20131115|13975_1  99 SNNIFVYILLVLAVLSSMYLTYYHRDTSAeAKQLKQKMSKMGKK 142
                  68999999887777666666666666666266666666555554 PP

>> PF13268.1  Protein of unknown function (DUF4059)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.8   5.9e-06     0.027       4      66 ..      10      69 ..       7      71 .. 0.90
   2 ?    1.1   0.1     0.088     4e+02      15      38 ..     107     130 ..      86     139 .. 0.45

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 5.9e-06
    PF13268.1  4 eifslYlegLllaallvllisliwillRaarkkDKTakerqafLydvlliailtiPilsFavm 66
                  +fs+Yl++ ++  l+ + +  ++i l  +r   KT+ +  +fL++  +i +  iP++ F + 
  MMETSP1325-20131115|13975_1 10 ALFSFYLHACVIVGLFKVGVRFFCITLHPMR-YGKTLMN--SFLFNSSVIVLCAIPVVQFCTY 69
                 69***********************999876.689*975..9******************875 PP

  == domain 2    score: 1.1 bits;  conditional E-value: 0.088
    PF13268.1  15 laallvllisliwillRaarkkDK 38 
                  l +l+vl    +    R ++   K
  MMETSP1325-20131115|13975_1 107 LLVLAVLSSMYLTYYHRDTSAEAK 130
                  222222222233333344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       840  (0.0614394); expected 273.4 (0.02)
Passed bias filter:                      418  (0.0305734); expected 273.4 (0.02)
Passed Vit filter:                        47  (0.00343768); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.37s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 681.32
//
Query:       MMETSP1325-20131115|13977_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.007   15.6   0.0      0.009   15.2   0.0    1.2  1  PF00179.21 Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> PF00179.21  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   6.6e-07     0.009       1      39 [.      30      72 ..      30     105 .. 0.92

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 6.6e-07
                 HHHHHHHHHHHS-TTCEEEEEEET....TECCEEEEEE---TT CS
   PF00179.21  1 rlqkelkelskkkpegikaevved....snllewkvvikgpeg 39
                 rl++e k ++k++p g++a++v++    snl++w++ + g+++
  MMETSP1325-20131115|13977_1 30 RLAQERKAWRKDHPYGFHAKPVNSadgsSNLMKWDCGVPGKKD 72
                 899********************556889***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      111  (0.00811878); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.32s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 1101.30
//
Query:       MMETSP1325-20131115|13987_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.061   13.1   0.0      0.063   13.1   0.0    1.1  1  PF08293.6 Mitochondrial ribosomal subunit S27


Domain annotation for each model (and alignments):
>> PF08293.6  Mitochondrial ribosomal subunit S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.6e-06     0.063      35      72 ..      24      63 ..       8      68 .] 0.71

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 4.6e-06
    PF08293.6 35 kgpelaayYPkkvvtfkdlkklyp.dllfr.Dekedfree 72
                 + +  a +YP++ vt ++l +  + ++++r De  + r e
  MMETSP1325-20131115|13987_1 24 QATVWAVWYPNTPVTARHLDRRVEgEMTIRsDEAGEQRRE 63
                 5566789*************99997555552444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 346.71
//
Query:       MMETSP1325-20131115|13981_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-35  120.5   0.9    6.4e-35  120.2   0.6    1.1  1  PF09055.6  Nickel-containing superoxide dismutase
    4.6e-15   54.5   0.2    1.3e-14   53.0   0.1    1.8  2  PF00240.18 Ubiquitin family
    2.9e-07   29.9   0.1    1.8e-06   27.4   0.0    2.3  3  PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
      0.089   12.5   0.0       0.22   11.2   0.0    1.7  1  PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
       0.11   12.4   0.0       0.28   11.1   0.0    1.7  1  PF11069.3  Protein of unknown function (DUF2870)


Domain annotation for each model (and alignments):
>> PF09055.6  Nickel-containing superoxide dismutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.2   0.6   2.4e-38   6.4e-35       7     126 ..      37     169 ..      32     172 .. 0.95

  Alignments for each domain:
  == domain 1    score: 120.2 bits;  conditional E-value: 2.4e-38
    PF09055.6   7 AHCdipCgiYdpasarveal.....tvkkatkkineleeksadaqkanqlvRlvaekeehaekvkeeilvlWtdYfkaqrle.............kypelhelvhkvmkaaskakqevdkakaeeLlakveeiaeifw 126
                   HC++pCgi+d+  + v+++     t++ka+ +inel++  +d+q+ nq++R+v++keeh++k+ + i    +dY++aqr +             +y+++++++h+vm+aa+k kq vd a++++L+++ve++++++ 
  MMETSP1325-20131115|13981_1  37 GHCQVPCGIFDD-PMIVAEIrqacaTIRKAMVQINELSQAVQDPQSFNQMTRWVMTKEEHCTKIMNLI----ADYCLAQRCKifgtpgspfqseeDYIDALKAHHAVMVAAMKGKQTVDVAQCDALEHAVEDFSKMYL 169
                  5***********.555555567788*******************************************....*****************************************************************6 PP

>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   0.1   4.9e-18   1.3e-14      36      69 .]       2      35 ..       1      35 [. 0.97
   2 ?   -3.2   0.0       1.7   4.8e+03      14      24 ..     125     135 ..     124     137 .. 0.81

  Alignments for each domain:
  == domain 1    score: 53.0 bits;  conditional E-value: 4.9e-18
                 EEEEE---BETTTSBTTTTTT-TTEEEEEEESSS CS
   PF00240.18 36 qrLiysGkvLeDdrtlseyniqdgstlhlvlrlr 69
                 qrLi++Gk+LeD+rtls+yniq++stlhlvlrlr
  MMETSP1325-20131115|13981_1  2 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 35
                 9*******************************87 PP

  == domain 2    score: -3.2 bits;  conditional E-value: 1.7
                  TTSBHHHHHHH CS
   PF00240.18  14 psdtvselKek 24 
                  ++d ++ lK++
  MMETSP1325-20131115|13981_1 125 EEDYIDALKAH 135
                  68999999987 PP

>> PF11976.3  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   6.5e-10   1.8e-06      42      72 .]       2      32 ..       1      32 [. 0.96
   2 ?   -0.7   0.0      0.39   1.1e+03      21      35 ..      97     111 ..      93     114 .. 0.85
   3 ?   -3.3   0.0       2.5   6.9e+03      13      19 ..     147     153 ..     138     167 .. 0.52

  Alignments for each domain:
  == domain 1    score: 27.4 bits;  conditional E-value: 6.5e-10
                 -EEE----B--TTSBGGGSS--TTEEEEEE- CS
    PF11976.3 42 vrLiFDGerLdpndtvedldiedgdtidvvi 72
                 +rLiF G++L++ +t+ d++i++++t+++v+
  MMETSP1325-20131115|13981_1  2 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 32
                 79**************************996 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.39
                  SBHHHHHHHHHHHHT CS
    PF11976.3  21 ttlskLieayrkkkg 35 
                  t++ +Li+ y+ +++
  MMETSP1325-20131115|13981_1  97 TKIMNLIADYCLAQR 111
                  89999******9876 PP

  == domain 3    score: -3.3 bits;  conditional E-value: 2.5
                  EEEEEET CS
    PF11976.3  13 vkikVkp 19 
                   +++V++
  MMETSP1325-20131115|13981_1 147 QTVDVAQ 153
                  3344444 PP

>> PF13881.1  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.2e-05      0.22      52      88 ..       3      33 ..       1      36 [. 0.81

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 8.2e-05
                 EEE----B--TTSBGGGGS--TTS-----EEEEEEE- CS
    PF13881.1 52 klilaGkiLednktLkelrlplgevkggvtvmHvvvr 88
                 +li aGk Led +tL++++++ +       ++H+v+r
  MMETSP1325-20131115|13981_1  3 RLIFAGKQLEDGRTLSDYNIQKES------TLHLVLR 33
                 9*****************766554......4777765 PP

>> PF11069.3  Protein of unknown function (DUF2870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0    0.0001      0.28       3      39 ..       3      40 ..       1      78 [. 0.83

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.0001
    PF11069.3  3 qLwfagkelkrgkklsdy.vGkNektkiivklqkkgeg 39
                  L fagk+l+ g++lsdy + k     ++ +l   +  
  MMETSP1325-20131115|13981_1  3 RLIFAGKQLEDGRTLSDYnIQKESTLHLVLRLRGGHCQ 40
                 588***************77777778888888765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       581  (0.0424956); expected 273.4 (0.02)
Passed bias filter:                      463  (0.0338648); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 838.72
//
Query:       MMETSP1325-20131115|13983_1  [L=240]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.1   1.6       0.19   11.2   1.1    1.4  1  PF06467.9 MYM-type Zinc finger with FCS sequence motif


Domain annotation for each model (and alignments):
>> PF06467.9  MYM-type Zinc finger with FCS sequence motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.1   1.4e-05      0.19       6      21 ..     184     199 ..     182     214 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.4e-05
    PF06467.9   6 kkrCwfCkkyiktkpt 21 
                  k++C++C+k+++ k++
  MMETSP1325-20131115|13983_1 184 KSTCTWCGKLFEYKED 199
                  789*********9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.36s 00:00:00.87 Elapsed: 00:00:00.55
# Mc/sec: 1045.68
//
Query:       MMETSP1325-20131115|13992_1  [L=42]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.066   12.7   0.1      0.068   12.6   0.1    1.1  1  PF01058.17 NADH ubiquinone oxidoreductase, 20 Kd subunit


Domain annotation for each model (and alignments):
>> PF01058.17  NADH ubiquinone oxidoreductase, 20 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1     5e-06     0.068     109     127 ..      10      28 ..       2      32 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5e-06
                  --.EE-------HHHH--- CS
   PF01058.17 109 pvdinipGCPphpeailet 127
                  +v++++ GCP++p++il++
  MMETSP1325-20131115|13992_1  10 DVQLYLTGCPARPATILRG 28 
                  6889************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (42 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       107  (0.00782621); expected 273.4 (0.02)
Passed bias filter:                      106  (0.00775307); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 197.35
//
Query:       MMETSP1325-20131115|13984_1  [L=322]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-15   54.2   0.2    1.4e-14   53.1   0.1    1.6  1  PF03946.9  Ribosomal protein L11, N-terminal domain
    5.3e-12   45.5   0.1      1e-11   44.6   0.1    1.5  1  PF00298.14 Ribosomal protein L11, RNA binding domain


Domain annotation for each model (and alignments):
>> PF03946.9  Ribosomal protein L11, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.1     2e-18   1.4e-14       2      59 ..      20      76 ..      19      77 .. 0.95

  Alignments for each domain:
  == domain 1    score: 53.1 bits;  conditional E-value: 2e-18
                 EEEEE------STTT-----------SHHHHHHHHCCTT-.-----EEEEEEE-STT- CS
    PF03946.9  2 iklqveaGkAnpaPplGpaLGplGvnimefckefnaaTkdykkGlpvpVkItvyndks 59
                 + l+  +G+  +a+ l+p++GplG++++++++++ +aT d+k G  v+Vk+t+ n+++
  MMETSP1325-20131115|13984_1 20 VVLRAVGGEIGAASALAPKIGPLGLSPKKVGEDIQKATMDWK-GQNVTVKLTIVNRQA 76
                 678999************************************.**********99987 PP

>> PF00298.14  Ribosomal protein L11, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.1   1.5e-15     1e-11       2      69 .]      81     150 ..      80     150 .. 0.93

  Alignments for each domain:
  == domain 1    score: 44.6 bits;  conditional E-value: 1.5e-15
                  ---TTTHHHHC----.----------.---EETTHHHHHHHHCTTTSS-SSSTTHHHTT---TTT----E CS
   PF00298.14   2 tPpasvlLkkaagie.kGsgkpgkek.vGkitlkqvyeIAkiKksdlnaldleaavksiiGtArsmGikV 69 
                   P+as+lL k ++   + ++k ++ k  G+itl++v ++A++ ++ ++a +le++vk+i+GtArs+G+++
  MMETSP1325-20131115|13984_1  81 VPSASALLVKCLKEPvRDRKKVKNIKhDGDITLDEVIDVARKMRERSMARKLEGTVKEILGTARSLGCTI 150
                  59***********975777888888889****************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.38s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 1543.25
//
Query:       MMETSP1325-20131115|13994_1  [L=98]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       216  (0.0157987); expected 273.4 (0.02)
Passed bias filter:                      203  (0.0148479); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 460.48
//
Query:       MMETSP1325-20131115|13995_1  [L=226]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-48  162.2   2.6    9.1e-48  162.0   1.8    1.0  1  PF01991.13 ATP synthase (E/31 kDa) subunit
  ------ inclusion threshold ------
      0.047   13.5   2.9      0.051   13.4   0.0    2.1  2  PF14091.1  Domain of unknown function (DUF4269)


Domain annotation for each model (and alignments):
>> PF01991.13  ATP synthase (E/31 kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.0   1.8   1.3e-51   9.1e-48       1     198 []      14     217 ..      14     217 .. 0.96

  Alignments for each domain:
  == domain 1    score: 162.0 bits;  conditional E-value: 1.3e-51
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---HHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF01991.13   1 fIrqeAeekaeeIkaeaeeefeiekeelveeekkkieeeyekkekqaelekkieiSnaklearlkvLkareelleevleeakkeLaevsedkeeYkellkeLivqalvkleepkvvvrsrkedleLvesvldkakeeykektkkdtvevivdedfl.......idciGGvvlesedgkirvdnTldarLelvkeellpeirkaLF 198
                  fI qeA+eka+eI++++e +f+ ek+ +v ++k++i++eye+ke++ e++++i++Sn+  ++r ++++are l+++++  a  ++++++++  +Y +++k+L+vqa++k+ee+++ v +r +d+ ++++++ ka +e k+kt+k++ ++  +++++       i +  Gvv+ +++g i++dnTl arL+l+++e +p ir++LF
  MMETSP1325-20131115|13995_1  14 FILQEAHEKANEIRVKTEHDFNLEKQMMVHNAKQRINSEYEQKERDREVQQRIAKSNQITKSRVEKMEAREVLVNDLMATAMAQINTIPSTP-QYPSIVKDLLVQAFIKIEESDLEVCCRADDAAVIQQAIGKAVAECKQKTGKVVNASFNGSKVIpsqvtsgIPSGPGVVVIAQNGSIVCDNTLGARLTLCFQEQTPVIRTKLF 217
                  8******************************************************************************************8.****************************************************99999999666787666555555************************************9 PP

>> PF14091.1  Domain of unknown function (DUF4269)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.5     0.098   6.7e+02      47      60 ..      45      58 ..       3      99 .. 0.57
   2 ?   13.4   0.0   7.4e-06     0.051      28      62 ..     120     154 ..     111     174 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.0 bits;  conditional E-value: 0.098
    PF14091.1 47 feealeslfselee 60
                  +++++s++++ e 
  MMETSP1325-20131115|13995_1 45 AKQRINSEYEQKER 58
                 23333333333333 PP

  == domain 2    score: 13.4 bits;  conditional E-value: 7.4e-06
    PF14091.1  28 idvegsDlDiicevkdleafeealeslfseleefk 62 
                  i++e+sDl ++c+++d + +++a+ ++++e+++ +
  MMETSP1325-20131115|13995_1 120 IKIEESDLEVCCRADDAAVIQQAIGKAVAECKQKT 154
                  899***********************999998854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1578  (0.115418); expected 273.4 (0.02)
Passed bias filter:                      596  (0.0435927); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.41s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 1002.92
//
Query:       MMETSP1325-20131115|13997_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-32  109.5  20.4    1.3e-16   60.0   4.8    2.1  2  PF00137.16 ATP synthase subunit C
  ------ inclusion threshold ------
      0.052   13.0   1.7       0.21   11.1   1.2    1.9  1  PF00420.19 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
        5.4    7.0   8.5         39    4.2   5.9    2.1  1  PF09685.5  Tic20-like protein


Domain annotation for each model (and alignments):
>> PF00137.16  ATP synthase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   4.8   2.9e-20   1.3e-16       1      66 []      31      96 ..      31      96 .. 0.98
   2 !   55.6   3.8   6.9e-19   3.2e-15       2      63 ..     121     182 ..     120     185 .. 0.95

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 2.9e-20
   PF00137.16  1 laalgaglavglaalgagigigiagaaaieaiarnPelfgkmligaalaEalaiyglviallllfa 66
                 ++++g+gl +g++++ga++gi  +gaa+ +a+++ P +++k+li ++++Ea+aiyg++ a++ll +
  MMETSP1325-20131115|13997_1 31 WGYFGIGLGLGCSVVGAAWGIWLTGAALTGAAVKAPRIRSKNLISVIFCEATAIYGVILAIILLTK 96
                 689************************************************************975 PP

  == domain 2    score: 55.6 bits;  conditional E-value: 6.9e-19
   PF00137.16   2 aalgaglavglaalgagigigiagaaaieaiarnPelfgkmligaalaEalaiyglvialll 63 
                  a++  gl+vgl+ l++gi +giag++++ a a++P+lf+k li+ ++a al+i+g++++++ 
  MMETSP1325-20131115|13997_1 121 AVFSSGLSVGLTNLASGISVGIAGSSCALADAQDPSLFVKILIVEIFASALSIFGIIVGIIQ 182
                  78999*******************************************************95 PP

>> PF00420.19  NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.2   4.6e-05      0.21      19      80 ..      68     182 ..      51     188 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 4.6e-05
   PF00420.19  19 l.rrnllkvLlglelmslavnllivllgvft....................................................vdplpqalvltalviaaaeaalgLallvrvyr 80 
                  + ++nl++v+++      +v+l+i+ll+  +                                                    +   p+++v +++v  +a a  +  ++v +++
  MMETSP1325-20131115|13997_1  68 IrSKNLISVIFCEATAIYGVILAIILLTKVQtkeladtlpadwendqfyfagyavfssglsvgltnlasgisvgiagsscalaDAQDPSLFVKILIVEIFASALSIFGIIVGIIQ 182
                  5589********************9998776799999999999999999999999999999999999999999999999999855556666666666666555555555555555 PP

>> PF09685.5  Tic20-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   5.9    0.0085        39      34      96 ..      65     187 ..      18     190 .. 0.75

  Alignments for each domain:
  == domain 1    score: 4.2 bits;  conditional E-value: 0.0085
    PF09685.5  34 spfvrehakealnfqislliygvvlgvlslll............................................................lligiglllllalllalvftilaaikaneGe 96 
                   p++r     ++ f  + +iygv+l+++ l+                                                             l+++i ++ ++a +l+++ +i+++i+ n+++
  MMETSP1325-20131115|13997_1  65 APRIRSKNLISVIFCEATAIYGVILAIILLTKvqtkeladtlpadwendqfyfagyavfssglsvgltnlasgisvgiagsscaladaqdpsLFVKILIVEIFASALSIFGIIVGIIQSNNAD 187
                  4777777777777777777777777777777778888888888888888888888888888888888***********************999999999999999999999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       456  (0.0333528); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.56
# Mc/sec: 817.33
//
Query:       MMETSP1325-20131115|14005_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-24   83.5   0.0    1.7e-12   46.4   0.0    2.2  3  PF13475.1 Domain of unknown function (DUF4116)
  ------ inclusion threshold ------
       0.12   10.9   0.0       0.13   10.8   0.0    1.0  1  PF03865.8 Haemolysin secretion/activation protein ShlB/FhaC/HecB


Domain annotation for each model (and alignments):
>> PF13475.1  Domain of unknown function (DUF4116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   5.2e-07    0.0036      19      49 .]       2      32 ..       2      32 .. 0.90
   2 !   46.4   0.0   2.5e-16   1.7e-12       3      49 .]      11      57 ..       9      57 .. 0.97
   3 !   27.1   0.0   2.7e-10   1.8e-06       1      34 [.      34      67 ..      34      69 .. 0.95

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 5.2e-07
    PF13475.1 19 lseeLknDkeivlkAvkqngsalsyaseeLr 49
                 +se ++++ e+v++Av+ +g++l  a+e Lr
  MMETSP1325-20131115|14005_1  2 ASEAIRSNHEFVKAAVQADGESLQWAHEVLR 32
                 6999*******************99998665 PP

  == domain 2    score: 46.4 bits;  conditional E-value: 2.5e-16
    PF13475.1  3 EivleavkkngsalkylseeLknDkeivlkAvkqngsalsyaseeLr 49
                 E+v++av+ +g++l+ + e L+nD++iv+ Av q+g+al++as eLr
  MMETSP1325-20131115|14005_1 11 EFVKAAVQADGESLQWAHEVLRNDFDIVKLAVCQSGYALEHASMELR 57
                 9******************************************9887 PP

  == domain 3    score: 27.1 bits;  conditional E-value: 2.7e-10
    PF13475.1  1 DrEivleavkkngsalkylseeLknDkeivlkAv 34
                 D +iv+ av + g+al+++s eL+n  eiv  A+
  MMETSP1325-20131115|14005_1 34 DFDIVKLAVCQSGYALEHASMELRNTAEIVRHAI 67
                 88****************************9998 PP

>> PF03865.8  Haemolysin secretion/activation protein ShlB/FhaC/HecB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0     2e-05      0.13     161     203 ..       5      47 ..       2      64 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 2e-05
    PF03865.8 161 glrsdyvfsrdqdqidslsiqltykridnyfesvrlelsspkl 203
                   +rs++ f +   q d  s q ++  ++n f+ v+l +     
  MMETSP1325-20131115|14005_1   5 AIRSNHEFVKAAVQADGESLQWAHEVLRNDFDIVKLAVCQSGY 47 
                  69**********************************9976554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.78
# Mc/sec: 215.06
//
Query:       MMETSP1325-20131115|14007_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 272.53
//
Query:       MMETSP1325-20131115|14002_1  [L=530]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-12   47.0   0.0    3.4e-12   46.5   0.0    1.3  1  PF13532.1 2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> PF13532.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   0.0   2.5e-16   3.4e-12       5     191 .]     140     333 ..     136     333 .. 0.85

  Alignments for each domain:
  == domain 1    score: 46.5 bits;  conditional E-value: 2.5e-16
    PF13532.1   5 ipnflsaeeqqellrelleeaplrqpttlggrkvslqqtllgklgwvtdg..kgyrysekksvdaepldpfpeallqlverlvkaagpeglepnaalVnfYrega..rmglHqDke.esdleapivSlSLGdsalflf......ggasred..eiikilLesGdllvmggesrlay.HgvprikkgtapelksrRinlTfR 191
                   +++++++++++ll++l+++a+ + +t +gg  ++l+  ++  l+   dg  +  r+ ++   + +++ p+p++l+ ++e++ ++ ++ +  +n++ Vn+Y  g+  ++  H D+     +++ i  l LG++++f++      g ++r++   + + + e+Gdl v+g +++  + H+vp  ++g      + R+++ fR
  MMETSP1325-20131115|14002_1 140 AKSWIPQDDATALLDTLVARAGTKLATRKGGSSYPLATDYF-GLRRRKDGaiPLDRWGSH-YESWTRVGPCPAELELFAEKIRRENQLGPGMINSIAVNYYCAGStsCIPAHYDSVtALVPGSDIYLLTLGAARDFVLcpasdaGARERSAmtIKGSWRPEHGDLFVLGPKTNSSFcHAVPFCDEG-----VGLRVSIVFR 333
                  689**********************************9988.444444444589999987.68899*********************99999*********9976679********5559****************9955444423333333255667789********************99998.....5999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       543  (0.0397162); expected 273.4 (0.02)
Passed bias filter:                      370  (0.0270626); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.89u 0.36s 00:00:01.25 Elapsed: 00:00:00.57
# Mc/sec: 2189.77
//
Query:       MMETSP1325-20131115|14016_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.1    8.8   4.9        6.7    6.3   3.4    1.9  1  PF05356.6 Phage Coat protein B


Domain annotation for each model (and alignments):
>> PF05356.6  Phage Coat protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   3.4   0.00049       6.7      62      80 ..      45      63 ..       4      64 .. 0.86

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.00049
    PF05356.6 62 yivgalvilavagliysml 80
                  +v alv+lavagl+  +l
  MMETSP1325-20131115|14016_1 45 VLVLALVLLAVAGLLRPLL 63
                 6799**********97665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|14020_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       278  (0.0203335); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.56
# Mc/sec: 252.47
//
Query:       MMETSP1325-20131115|14023_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       327  (0.0239175); expected 273.4 (0.02)
Passed bias filter:                      316  (0.0231129); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 273.87
//
Query:       MMETSP1325-20131115|14022_1  [L=412]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0029   16.8   0.9     0.0039   16.4   0.6    1.1  1  PF04888.7 Secretion system effector C (SseC) like family
  ------ inclusion threshold ------
       0.13   12.5   2.4       0.23   11.7   1.6    1.3  1  PF05957.8 Bacterial protein of unknown function (DUF883)


Domain annotation for each model (and alignments):
>> PF04888.7  Secretion system effector C (SseC) like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.6   5.7e-07    0.0039     139     212 ..     254     325 ..     248     345 .. 0.82

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 5.7e-07
    PF04888.7 139 gsiakavatvvavlagaaasgvaaavkkaagkvgsalakqvakqvakalgkallnaaaqggaklasiakkatss 212
                   si +a+ ++ +++  +a + v+ a+ +aa+++g++ a++v+++v   +++a+ naaa++++ +  +a  a ++
  MMETSP1325-20131115|14022_1 254 LSIGSAIGKACCLFMRTAGEEVGDAARQAANAAGDV-ADYVGDAVSD-ATSAASNAAANATEEAGAAAEEAQAA 325
                  5899***********999999999999999988888.9999998877.88888888888888887777666654 PP

>> PF05957.8  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.6   3.4e-05      0.23      18      74 ..     275     331 ..     267     333 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3.4e-05
    PF05957.8  18 lksaadeageeaeelReraeealerarerlrdaedavrerakeaaeaadeyVrenPw 74 
                  + +aa +a++ a ++ + + +a+++a +++++a+ ++ e+a +aae+a+  V ++P+
  MMETSP1325-20131115|14022_1 275 VGDAARQAANAAGDVADYVGDAVSDATSAASNAAANATEEAGAAAEEAQAAVPDSPV 331
                  4578999999999****************************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       509  (0.0372294); expected 273.4 (0.02)
Passed bias filter:                      332  (0.0242832); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.37s 00:00:01.10 Elapsed: 00:00:00.49
# Mc/sec: 2014.90
//
Query:       MMETSP1325-20131115|14025_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       350  (0.0255998); expected 273.4 (0.02)
Passed bias filter:                      285  (0.0208455); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.35s 00:00:00.78 Elapsed: 00:00:00.50
# Mc/sec: 618.26
//
Query:       MMETSP1325-20131115|14026_1  [L=295]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-06   27.1   0.0      2e-06   26.7   0.0    1.1  1  PF00266.14 Aminotransferase class-V


Domain annotation for each model (and alignments):
>> PF00266.14  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   1.4e-10     2e-06     144     324 ..      60     240 ..      45     258 .. 0.80

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 1.4e-10
                  EEESB-S----B--HHHHHHHHHH---EEEEE---STTTS---HHHHT-SEEE------------.--EEE-HHHHHH----------EEE--S.---EE--TTGGG---------------...HHHHH.HH---HHHHHHHHHHHHHHHHHHTTSTT-EEE--...TT----EEEE-----TTT- CS
   PF00266.14 144 aithvsnvtGvvqpveeiaklakeagalvvvDaaqavghipidvkklgvDflafSgHKllgPtGi.Gvlyvrrellekleplklggemveevsl.eettfaeapskfeaGTpniagiiglga...aleyl.eeigleaiekhekelaeylyerLsalpgvellgpakaerrasivsfafkgveaedv 324
                  ++t++ + +Gv+ p ++ +    ++  l++ Da +av  ++id +k++v   + S +K++g +G  G+l++++++ e+le   + g  + ++    +++ +     f+  T n++++i ++    al++  + +gl    +++++  + +  + +++p + +l +++a r+++ v++++ ++ea+++
  MMETSP1325-20131115|14026_1  60 VFTWNGTTSGVCVPNADWI--SDDRTGLTFNDATSAVFAMDIDWSKVDV--TTYSWQKVMGGEGAhGMLILSPRAVERLESYTPEGRALPKIFRmTKKG-KLDEALFKGATINTPSMICVEDyldALQWAdSVGGLPGLIARSQANLAEVATAVDKYPWLNFLAKDEASRSSTSVCLTV-DMEASKL 240
                  579999*****99999988..5667889****************99877..*************77*********************999998855555.4445558888*********996223667777778999999999999999999999999999977655555555554444.4555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       252  (0.0184318); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.39s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 1442.70
//
Query:       MMETSP1325-20131115|14032_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0089   15.7   0.1      0.013   15.1   0.1    1.2  1  PF01520.13 N-acetylmuramoyl-L-alanine amidase


Domain annotation for each model (and alignments):
>> PF01520.13  N-acetylmuramoyl-L-alanine amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   9.3e-07     0.013     102     171 ..      36     105 ..      28     109 .. 0.85

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 9.3e-07
   PF01520.13 102 krlakailkelkkklglknrgvkkasnlavlrktkmpavlvElgfisnpedakllkseeyqqkiakaiae 171
                  + la+++ +  k+  +++     + ++++vl ++++p  + E+ + + + +a++   ++  ++ a+aia+
  MMETSP1325-20131115|14032_1  36 EMLAQSLGNDAKEIVKKHEGDGDAGEDFYVLDRPESPTFVSETIYATAAGEAAAAVAAAAAAAQANAIAA 105
                  678888888888888877444445557********************************99999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1077  (0.0787741); expected 273.4 (0.02)
Passed bias filter:                      524  (0.0383265); expected 273.4 (0.02)
Passed Vit filter:                        46  (0.00336454); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.41s 00:00:00.88 Elapsed: 00:00:00.57
# Mc/sec: 677.59
//
Query:       MMETSP1325-20131115|14038_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-31  106.7   0.0    9.9e-31  106.4   0.0    1.0  1  PF00022.14 Actin


Domain annotation for each model (and alignments):
>> PF00022.14  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.4   0.0   7.3e-35   9.9e-31     288     382 ..       8     110 ..       3     117 .. 0.93

  Alignments for each domain:
  == domain 1    score: 106.4 bits;  conditional E-value: 7.3e-35
   PF00022.14 288 llgiaelivaainacdvdlrkeLlanivvtGGtsllpglteRlekelaqlapsgvkvkiiapea........erkysaWiGGSiLAslgtfqqlwvskqeYeE 382
                  ++g++ l++++i++cd dl+++Ll+++v++GGt++lpg++eRl++el +++ +g++++++ +++        +rk++aWiGGS++Asl+tf+++ v+kqe+e+
  MMETSP1325-20131115|14038_1   8 AKGLPALVQKSISMCDRDLQPDLLSSVVLAGGTTMLPGFSERLKHELVRISAPGTSFNVVPDSKgsergynsQRKHAAWIGGSMFASLDTFRHVQVTKQEWED 110
                  57************************************************99999999987776777788899****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      222  (0.0162376); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.33s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 724.12
//
Query:       MMETSP1325-20131115|14045_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       399  (0.0291837); expected 273.4 (0.02)
Passed bias filter:                      346  (0.0253072); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 444.32
//
Query:       MMETSP1325-20131115|14046_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-12   45.0   0.0    1.1e-05   25.6   0.0    1.9  2  PF13637.1  Ankyrin repeats (many copies)
    2.3e-11   43.7   0.0    2.6e-11   43.5   0.0    1.1  1  PF12796.2  Ankyrin repeats (3 copies)
    3.5e-08   32.7   0.1    2.9e-06   26.6   0.0    2.9  3  PF00023.25 Ankyrin repeat
    1.1e-07   31.7   0.0    1.6e-07   31.2   0.0    1.3  1  PF13857.1  Ankyrin repeats (many copies)
    2.7e-06   26.9   0.0    0.00012   21.8   0.0    2.7  3  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   2.6e-08   7.1e-05      14      54 .]       2      42 ..       1      42 [. 0.93
   2 !   25.6   0.0   4.2e-09   1.1e-05       2      41 ..      23      62 ..      22      76 .. 0.90

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 2.6e-08
    PF13637.1 14 lelvklLlekgidinrtdesGntaLhiAalrgnieilklLl 54
                 le v  L+e g d+   de+++ ++h Aa++g++e++k L+
  MMETSP1325-20131115|14046_1  2 LEEVTKLIEAGEDVSVPDENNWHPIHEAARGGHVEVVKKLV 42
                 5778899*******************************985 PP

  == domain 2    score: 25.6 bits;  conditional E-value: 4.2e-09
    PF13637.1  2 ltaLhyaaisgrlelvklLlekgidinrtdesGntaLhiA 41
                 + ++h aa+ g++e+vk L++ g+d+     +G taL  A
  MMETSP1325-20131115|14046_1 23 WHPIHEAARGGHVEVVKKLVDGGADLGVMTYQGGTALWWA 62
                 789**********************************987 PP

>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.0   9.6e-15   2.6e-11      11      78 ..       3      76 ..       1      84 [. 0.86

  Alignments for each domain:
  == domain 1    score: 43.5 bits;  conditional E-value: 9.6e-15
    PF12796.2 11 elvklLlekgadvdl..get...pLhlAaeagnleivklLleagadvnakdkegntpLhlA..vrnghlelvklL 78
                 e v +L+e+g dv +    +   p+h Aa+ g++e+vk L++ gad+   +++g t+L +A  v   ++ +v++L
  MMETSP1325-20131115|14046_1  3 EEVTKLIEAGEDVSVpdE-NnwhPIHEAARGGHVEVVKKLVDGGADLGVMTYQGGTALWWArqVHGDKHAVVRYL 76
                 56899**********854.3589**************************************66667777888887 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.055   1.5e+02      18      32 ..       5      19 ..       2      20 .. 0.84
   2 !   26.6   0.0   1.1e-09   2.9e-06       2      30 ..      22      50 ..      21      53 .. 0.91
   3 ?    0.1   0.0      0.28   7.6e+02       4       9 ..      57      62 ..      54      81 .. 0.65

  Alignments for each domain:
  == domain 1    score: 2.3 bits;  conditional E-value: 0.055
                 HHHHHHTTSSTTHBH CS
   PF00023.25 18 vklLlsqGAdlnaqd 32
                 v+ L+++G d+ + d
  MMETSP1325-20131115|14046_1  5 VTKLIEAGEDVSVPD 19
                 678********9877 PP

  == domain 2    score: 26.6 bits;  conditional E-value: 1.1e-09
                 SCBHHHHHHHTTHHHHHHHHHHTTSSTTH CS
   PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGAdlna 30
                  + P H Aa+ g++evvk L++ GAdl +
  MMETSP1325-20131115|14046_1 22 NWHPIHEAARGGHVEVVKKLVDGGADLGV 50
                 689***********************965 PP

  == domain 3    score: 0.1 bits;  conditional E-value: 0.28
                 BHHHHH CS
   PF00023.25  4 TPLHlA 9 
                 T+L +A
  MMETSP1325-20131115|14046_1 57 TALWWA 62
                 888887 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   5.8e-11   1.6e-07       1      53 [.       8      59 ..       8      62 .. 0.94

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 5.8e-11
    PF13857.1  1 Llehg.padvnatdeggntpLhlAakggalevvrlLlapgadlnlrdsdgltal 53
                 L+e+g +++v +++++  +p+h Aa+gg++evv++L++ gadl++ + +g tal
  MMETSP1325-20131115|14046_1  8 LIEAGeDVSVPDENNW--HPIHEAARGGHVEVVKKLVDGGADLGVMTYQGGTAL 59
                 899**99999999999..***************************999999997 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.31   8.3e+02      18      29 ..       5      16 ..       2      17 .. 0.78
   2 !   21.8   0.0   4.3e-08   0.00012       1      28 [.      21      48 ..      21      50 .. 0.94
   3 ?    0.7   0.0      0.29     8e+02       4      23 ..      57      77 ..      54      83 .. 0.61

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.31
    PF13606.1 18 veaLlengadin 29
                 v  L+e+g d++
  MMETSP1325-20131115|14046_1  5 VTKLIEAGEDVS 16
                 6689****9985 PP

  == domain 2    score: 21.8 bits;  conditional E-value: 4.3e-08
    PF13606.1  1 nGnTpLhlAasngrielveaLlengadi 28
                 n+++p+h Aa+ g++e+v+ L++ gad+
  MMETSP1325-20131115|14046_1 21 NNWHPIHEAARGGHVEVVKKLVDGGADL 48
                 6899**********************97 PP

  == domain 3    score: 0.7 bits;  conditional E-value: 0.29
    PF13606.1  4 TpLhlAas.ngrielveaLle 23
                 T+L +A + +g + +v  +le
  MMETSP1325-20131115|14046_1 57 TALWWARQvHGDKHAVVRYLE 77
                 777777666676665555566 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 421.76
//
Query:       MMETSP1325-20131115|14057_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.09   11.0   0.2      0.095   10.9   0.2    1.0  1  PF05781.7 MRVI1 protein


Domain annotation for each model (and alignments):
>> PF05781.7  MRVI1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2     7e-06     0.095     479     513 ..       9      43 ..       2      69 .. 0.74

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 7e-06
    PF05781.7 479 alWlsaaiilllaallslltgqlfqsaveaadtqe 513
                  +l l   +++ l++l+s+l++qlfqs v +a +  
  MMETSP1325-20131115|14057_1   9 VLVLCFRLLVALSVLFSVLSAQLFQSRVPNAAGAS 43 
                  66777788999*****************8776643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       542  (0.0396431); expected 273.4 (0.02)
Passed bias filter:                      414  (0.0302809); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.39s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|14058_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 381.64
//
Query:       MMETSP1325-20131115|14068_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.48
# Mc/sec: 399.39
//
Query:       MMETSP1325-20131115|14072_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.1e-06   24.8   0.0    7.7e-06   24.7   0.0    1.0  1  PF00995.18 Sec1 family
  ------ inclusion threshold ------
      0.043   13.2   0.2      0.046   13.1   0.1    1.1  1  PF02775.16 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
      0.064   12.1   0.0      0.076   11.9   0.0    1.2  1  PF14167.1  YfkD-like protein


Domain annotation for each model (and alignments):
>> PF00995.18  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   1.7e-09   7.7e-06     480     535 ..       2      49 ..       1      53 [. 0.75

  Alignments for each domain:
  == domain 1    score: 24.7 bits;  conditional E-value: 1.7e-09
                  TS--S..S-----.------------------------EEEEEEE---BHHHHHHHH CS
   PF00995.18 480 typyfddkvaqls.gasgslrskrsnaaktsearkrvqrviVFvvGGvTyeEiralq 535
                  ++ y+d+kv+    ga+ +l +         + r + ++v+VF+vGG+++ E++ +q
  MMETSP1325-20131115|14072_1   2 SFLYLDPKVKGDGsGAAPALGA---------KGRVPYREVVVFMVGGGSFMEYQKIQ 49 
                  79999**994433233333333.........46899******************998 PP

>> PF02775.16  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1     1e-05     0.046      31      59 ..      14      43 ..       8      54 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1e-05
                 --HHCCCHHHCCTSTTS-EE.EEE----TT CS
   PF02775.16 31 GyglpaAiGaklakpdrevv.aivGDGgfl 59
                 G g + A+Gak   p revv  +vG G+f+
  MMETSP1325-20131115|14072_1 14 GSGAAPALGAKGRVPYREVVvFMVGGGSFM 43
                 8999********999665550566777766 PP

>> PF14167.1  YfkD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.7e-05     0.076     165     205 ..       7      47 ..       2      55 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 1.7e-05
    PF14167.1 165 apkklGylyayvPavnekGkvtyGevylvlkgekkklevkn 205
                   pk  G   + +Pa   kG+v y ev + + g+   +e + 
  MMETSP1325-20131115|14072_1   7 DPKVKGDGSGAAPALGAKGRVPYREVVVFMVGGGSFMEYQK 47 
                  67888889999*****************9999887776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       132  (0.00965477); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|14069_1  [L=108]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-06   25.9  13.5    1.4e-05   24.4   9.3    1.9  1  PF00796.13 Photosystem I reaction centre subunit VIII


Domain annotation for each model (and alignments):
>> PF00796.13  Photosystem I reaction centre subunit VIII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   9.3     1e-09   1.4e-05       1      23 [.      80     102 ..      80     103 .. 0.96

  Alignments for each domain:
  == domain 1    score: 24.4 bits;  conditional E-value: 1e-09
   PF00796.13   1 LPSIlVPlVGLvfPAvaMalLFl 23 
                  LP I VPlVGLv+P ++M+l+Fl
  MMETSP1325-20131115|14069_1  80 LPPIMVPLVGLVMPGIMMSLFFL 102
                  899*******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      231  (0.0168958); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 575.13
//
Query:       MMETSP1325-20131115|14073_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      0.006   15.9   0.0      0.011   15.0   0.0    1.5  1  PF01429.14 Methyl-CpG binding domain


Domain annotation for each model (and alignments):
>> PF01429.14  Methyl-CpG binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   8.4e-07     0.011      23      58 ..      16      71 ..       9      88 .. 0.78

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 8.4e-07
   PF01429.14 23 ksGssa....................gkvdvfYysPtGkkfrskkevaayLenakq 58
                 ksGs a                       dvfY +P  k++r+ ++v+  L+ +  
  MMETSP1325-20131115|14073_1 16 KSGSAAgkmpaidsvpqspvphplafDDDDVFYAEPAAKRARTDQDVMHMLDMHDA 71
                 566555677777777777777776666779*********************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       363  (0.0265506); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 423.64
//
Query:       MMETSP1325-20131115|14077_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00063   19.2   0.2    0.00073   19.0   0.1    1.1  1  PF13436.1 Glycine-zipper containing OmpA-like membrane domain
  ------ inclusion threshold ------
        9.1    5.9   7.8         11    5.6   5.4    1.1  1  PF04402.9 Protein of unknown function (DUF541)


Domain annotation for each model (and alignments):
>> PF13436.1  Glycine-zipper containing OmpA-like membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.1   1.1e-07   0.00073      33      69 ..      63      98 ..      32      99 .] 0.63

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 1.1e-07
    PF13436.1 33 CrqyAesqtgakaqeaaesaaegaavGaavGAaagaa 69
                  +q+A++   +ka +++ +a +ga++Ga++GA++g +
  MMETSP1325-20131115|14077_1 63 AKQLAKNE-RMKAARRKARAQAGAVAGAVAGAVGGVV 98
                 24455553.4456677889999***********9976 PP

>> PF04402.9  Protein of unknown function (DUF541)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   5.4    0.0016        11     125     156 ..      67      98 ..      59      99 .] 0.89

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0016
    PF04402.9 125 lkrealkeAvkdArekAealAealgaklgkvl 156
                  +k+e +k+A ++Ar++A a+A+a    +g+v+
  MMETSP1325-20131115|14077_1  67 AKNERMKAARRKARAQAGAVAGAVAGAVGGVV 98 
                  56999************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       968  (0.0708016); expected 273.4 (0.02)
Passed bias filter:                      779  (0.0569778); expected 273.4 (0.02)
Passed Vit filter:                        75  (0.00548566); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.41s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 447.62
//
Query:       MMETSP1325-20131115|14074_1  [L=97]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   12.4   0.4      0.034   12.3   0.3    1.1  1  PF05793.7 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
      0.055   12.7   0.1       0.09   12.0   0.0    1.4  1  PF13285.1 Domain of unknown function (DUF4073)


Domain annotation for each model (and alignments):
>> PF05793.7  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3     5e-06     0.034     154     194 ..       7      51 ..       4      86 .. 0.75

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5e-06
                  XXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXX..... CS
    PF05793.7 154 aryktLtleeAEeeferRkktl....ngfslmlkkalkngeaavg 194
                  a+yk+L++ eA e   ++k+ +    +  + ++ +a+k+++++ g
  MMETSP1325-20131115|14074_1   7 AQYKALKAKEAAEAKANKKRAMkgsaEDLTTWQARAAKQNPNQPG 51 
                  79*******9999888888887222256889*********98755 PP

>> PF13285.1  Domain of unknown function (DUF4073)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.3e-05      0.09     100     144 ..      19      63 ..       7      69 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.3e-05
    PF13285.1 100 nvivgateymeysvegtnewktynkanppkfdgdkivyvrhkgem 144
                  +  ++    m+ s e+   w++   ++ p+ +g   vyv+ kg+ 
  MMETSP1325-20131115|14074_1  19 EAKANKKRAMKGSAEDLTTWQARAAKQNPNQPGAGHVYVKMKGKA 63 
                  55566677899999*****************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       654  (0.047835); expected 273.4 (0.02)
Passed bias filter:                      511  (0.0373757); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.44s 00:00:00.79 Elapsed: 00:00:00.66
# Mc/sec: 352.19
//
Query:       MMETSP1325-20131115|14085_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       313  (0.0228935); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.42s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 659.00
//
Query:       MMETSP1325-20131115|14086_1  [L=166]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-19   70.5   0.0    1.3e-19   70.2   0.0    1.0  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.0   9.4e-24   1.3e-19     183     272 .]       7      94 ..       3      94 .. 0.94

  Alignments for each domain:
  == domain 1    score: 70.2 bits;  conditional E-value: 9.4e-24
                  EEE-----B--SE.EE-GGGBSCHHH--BTTSSCEEEEEEEEEE---TT---EEEEEESS-TT-EEEEETTEEEEE-HHHHTTCEEEEEEE CS
                  xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00443.24 183 nkKlnekvefple.LdlssyvneekkeeseskpkkYeLvavvvHsGslssGHYvayvknneknkWlkfdDetvtevkeeevlkesaYvlfY 272
                  ++K++  v+fpl  Ldl+ +v  +   +s+    +Y+ +av  H+G++++GHY+a vkn ++ +W+ f+D++v+  +  + ++ +aYvlfY
  MMETSP1325-20131115|14086_1   7 RQKIDSLVNFPLDgLDLTDMVLGT---SSSRARPIYDCYAVSEHMGGMGGGHYTATVKNMRNAQWYSFNDSHVSGAEGTDGVTPNAYVLFY 94 
                  69*******************976...67778889******************************************9999999******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 795.59
//
Query:       MMETSP1325-20131115|14092_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 329.50
//
Query:       MMETSP1325-20131115|14095_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       338  (0.0247221); expected 273.4 (0.02)
Passed bias filter:                      324  (0.0236981); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 392.59
//
Query:       MMETSP1325-20131115|14090_1  [L=231]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       286  (0.0209187); expected 273.4 (0.02)
Passed bias filter:                      217  (0.0158719); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.39s 00:00:00.90 Elapsed: 00:00:00.56
# Mc/sec: 988.50
//
Query:       MMETSP1325-20131115|14099_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-06   23.8   0.0    6.5e-06   23.8   0.0    1.0  1  PF09735.4 Membrane-associated apoptosis protein


Domain annotation for each model (and alignments):
>> PF09735.4  Membrane-associated apoptosis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   4.8e-10   6.5e-06     599     690 ..       3      92 ..       1      94 [] 0.85

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 4.8e-10
    PF09735.4 599 leeiakqlenliekvcseqlaleeqllpkhaarlvsaarnkkkkkakakkgekelkkpGeESyrknrevvtmldklllrLtelcsalndvea 690
                  l+ i+ ++  l+  + +e  al ++  p++aa+l+++++  +++ +k ++g    +++G+ES++++r++v +l ++  +L+e+  a+n+  +
  MMETSP1325-20131115|14099_1   3 LNLIVLKVGSLLDAILEEVEALGSKADPREAAKLLQRSQAGASRPKKGAEG--AESIAGSESFPRSRSSVSKLVQAEANLAEILCAVNKSGT 92 
                  56667778889999*********************9999776665555555..6789**************************999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       277  (0.0202604); expected 273.4 (0.02)
Passed bias filter:                      249  (0.0182124); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 469.29
//
Query:       MMETSP1325-20131115|14105_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       127  (0.00928906); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 335.49
//
Query:       MMETSP1325-20131115|14104_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-14   52.0  34.1    3.3e-07   30.4   5.3    3.1  3  PF02176.13 TRAF-type zinc finger
  ------ inclusion threshold ------
      0.076   12.5   0.8        4.3    6.8   0.0    2.5  3  PF02502.13 Ribose/Galactose Isomerase
      0.079   12.5  19.6       0.34   10.4   1.1    3.1  3  PF03145.11 Seven in absentia protein family
        1.4    8.7  19.3       0.42   10.4   2.6    3.2  3  PF01485.16 IBR domain


Domain annotation for each model (and alignments):
>> PF02176.13  TRAF-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   6.2   1.4e-09   4.7e-06       1      60 []       8      64 ..       8      64 .. 0.93
   2 !   30.4   5.3   9.5e-11   3.3e-07       2      55 ..      35      87 ..      34      92 .. 0.88
   3 !   18.9   1.4   3.6e-07    0.0012       1      36 [.      93     127 ..      92     131 .. 0.79

  Alignments for each domain:
  == domain 1    score: 26.7 bits;  conditional E-value: 1.4e-09
                 ----.---S--B-TT--S-B.--SSSSTTTTTTS-TTS----S-....--------HHHHT CS
   PF02176.13  1 Hqkt.CpfapvpCpnqcckkkilRedledHleedCpkrevkCkfkevGCkvkvkkealqkh 60
                 H ++ C+   + C    c +++l +dl+ H e +Cp r v+C++   GC  + + + +++h
  MMETSP1325-20131115|14104_1  8 HGQHeCSHRSIICAV--CAEPVLAKDLKHHKEWSCPLRVVDCPH--RGCYKRLPLKDMKQH 64
                 77777********66..8899***********************..**********99999 PP

  == domain 2    score: 30.4 bits;  conditional E-value: 9.5e-11
                 ---..---S--B-TT--S-B.--SSSSTTTTTTS-TTS----S-....-------- CS
   PF02176.13  2 qkt..CpfapvpCpnqcckkkilRedledHleedCpkrevkCkfkevGCkvkvkke 55
                 +k+  Cp  +v+Cp++ c k ++ +d+++H + +C+kr v C     GC +++   
  MMETSP1325-20131115|14104_1 35 HKEwsCPLRVVDCPHRGCYKRLPLKDMKQHTDYECRKRMVFCLQ---GCGMEMYAD 87
                 44447**************************************9...***999765 PP

  == domain 3    score: 18.9 bits;  conditional E-value: 3.6e-07
                  -------S--B-TT--S-B.--SSSST.TTTTTS-TT CS
   PF02176.13   1 HqktCpfapvpCpnqcckkkilRedle.dHleedCpk 36 
                  H+k C++  v+Cp +c+k   +Re+++  H++ +C +
  MMETSP1325-20131115|14104_1  93 HEKYCEMRFVQCPLGCGKS--IRENVKmHHVSFECIR 127
                  7777*************77..8888882467777866 PP

>> PF02502.13  Ribose/Galactose Isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.012        41      77      98 ..      15      36 ..      12      39 .. 0.88
   2 ?    6.8   0.0    0.0013       4.3      56      79 ..      68      91 ..      58     101 .. 0.84
   3 ?   -1.6   0.0       0.5   1.7e+03      57      75 ..      97     115 ..      91     122 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.012
                 -----EEE-SSHHHHHHHHHTT CS
   PF02502.13 77 vkgirAalvhdeesAelarehn 98
                 ++ i++a++ ++  A+  ++h 
  MMETSP1325-20131115|14104_1 15 HRSIICAVCAEPVLAKDLKHHK 36
                 789************9999886 PP

  == domain 2    score: 6.8 bits;  conditional E-value: 0.0013
                 SSSEEEEE-------HHHHHT--- CS
   PF02502.13 56 eadlgiliCgtGiGmsiaaNkvkg 79
                 e++   ++C  G Gm + a k kg
  MMETSP1325-20131115|14104_1 68 ECRKRMVFCLQGCGMEMYADKRKG 91
                 5667789*************9987 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.5
                  SSEEEEE-------HHHHH CS
   PF02502.13  57 adlgiliCgtGiGmsiaaN 75 
                  +++  + C  G G si  N
  MMETSP1325-20131115|14104_1  97 CEMRFVQCPLGCGKSIREN 115
                  5666788999999999877 PP

>> PF03145.11  Seven in absentia protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   3.3    0.0057        20      16      53 ..      12      51 ..       6      53 .. 0.78
   2 ?   10.4   1.1    0.0001      0.34      22      49 ..      50      78 ..      49      85 .. 0.88
   3 ?    8.8   1.6    0.0003         1      23      51 ..      79     108 ..      77     124 .. 0.74

  Alignments for each domain:
  == domain 1    score: 4.6 bits;  conditional E-value: 0.0057
   PF03145.11 16 pcknaalgcavr...lplqekaeHee.sceykpyeCpiggak 53
                  c+++++ cav    ++ +++++H+e sc  + ++Cp+  + 
  MMETSP1325-20131115|14104_1 12 ECSHRSIICAVCaepVLAKDLKHHKEwSCPLRVVDCPH--RG 51
                 5888888887765446778888888768*********9..44 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.0001
   PF03145.11 22 lgcavrlplqekaeHee.sceykpyeCpi 49
                 +gc  rlpl+++++H + +c+++ ++C  
  MMETSP1325-20131115|14104_1 50 RGCYKRLPLKDMKQHTDyECRKRMVFCLQ 78
                 7**************8758********86 PP

  == domain 3    score: 8.8 bits;  conditional E-value: 0.0003
   PF03145.11  23 gcavrlpl.qekaeHeesceykpyeCpigg 51 
                  gc + +   + k +He+ ce++ ++Cp+g 
  MMETSP1325-20131115|14104_1  79 GCGMEMYAdKRKGHHEKYCEMRFVQCPLGC 108
                  777765441567789999*********953 PP

>> PF01485.16  IBR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   2.0     0.056   1.9e+02      41      58 ..      11      27 ..       2      40 .. 0.59
   2 ?   10.4   2.6   0.00012      0.42      19      53 ..      45      78 ..      27      87 .. 0.79
   3 ?    5.6   0.6    0.0039        13      15      43 ..      94     125 ..      82     131 .. 0.72

  Alignments for each domain:
  == domain 1    score: 1.8 bits;  conditional E-value: 0.056
   PF01485.16 41 vtCskCgfefCflCkkew 58
                  +Cs  +  +C  C ++ 
  MMETSP1325-20131115|14104_1 11 HECS-HRSIICAVCAEPV 27
                 4666.6667777776665 PP

  == domain 2    score: 10.4 bits;  conditional E-value: 0.00012
   PF01485.16 19 kwCprpdCeaiiekekgakkssvtCskCgfefCfl 53
                   Cp+ +C + + +++ ++++  +C+  +  fC +
  MMETSP1325-20131115|14104_1 45 VDCPHRGCYKRLPLKDMKQHTDYECR-KRMVFCLQ 78
                 48************************.99999975 PP

  == domain 3    score: 5.6 bits;  conditional E-value: 0.0039
   PF01485.16  15 ekel..k..wCprpdCeaiiekekgakkssvtC 43 
                  ek +  +  +Cp  +C++ i+ + + ++ s++C
  MMETSP1325-20131115|14104_1  94 EKYCemRfvQCPL-GCGKSIRENVKMHHVSFEC 125
                  3444322459*99.*******999999988888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       498  (0.0364248); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.36s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 645.55
//
Query:       MMETSP1325-20131115|14108_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-13   49.1   1.0    2.9e-13   48.9   0.7    1.0  1  PF00909.16 Ammonium Transporter Family
  ------ inclusion threshold ------
          8    6.0   8.8       0.45   10.0   1.2    2.1  2  PF10958.3  Protein of unknown function (DUF2759)


Domain annotation for each model (and alignments):
>> PF00909.16  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.7   4.2e-17   2.9e-13     299     396 ..       1     106 [.       1     110 [. 0.89

  Alignments for each domain:
  == domain 1    score: 48.9 bits;  conditional E-value: 4.2e-17
                  HTS-HTTGG-----------------TTSTT--........-----------...-HHHHHHHHHHHHHHH---TTT---HHHHHH---B-XHHHHHXXXHHHHXXX CS
   PF00909.16 299 lkidDsldvvavHgvgGiwGllavgifaaekvv........askisggllsgeg.kqlvvqligilvilayafvvtlilllllklllgLrvseeeeevglDvaehge 396
                  l+idD+  ++++Hg++G  G+la g+f++++++        ++  +g +++++g +ql +q++ +++i+++++v tlil+   ++++g r  ++ e++g D +++g 
  MMETSP1325-20131115|14108_1   1 LHIDDVSHAISMHGFAGGFGMLAAGLFSTKEAYqaayaynrVDACHG-IFYNGGiAQLAAQAMTMAFIFGWTVVATLILMGAAHIMFGSRYPSQWEQKGVDYHKFGG 106
                  79****************************9999**99985555555.5555555************************************999999*****99964 PP

>> PF10958.3  Protein of unknown function (DUF2759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.6     0.099   6.8e+02      23      35 ..      15      27 ..      12      28 .. 0.90
   2 ?   10.0   1.2   6.6e-05      0.45      31      48 ..      64      81 ..      57      85 .. 0.81

  Alignments for each domain:
  == domain 1    score: -0.2 bits;  conditional E-value: 0.099
    PF10958.3 23 LaivFagltvaVF 35
                 +a +F++l++ +F
  MMETSP1325-20131115|14108_1 15 FAGGFGMLAAGLF 27
                 8999****99999 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 6.6e-05
    PF10958.3 31 tvaVFGWFtimTiihsgy 48
                  + +FGW +++T+i  g 
  MMETSP1325-20131115|14108_1 64 MAFIFGWTVVATLILMGA 81
                 4569**********9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       511  (0.0373757); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 734.20
//
Query:       MMETSP1325-20131115|14107_1  [L=289]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       206  (0.0150673); expected 273.4 (0.02)
Passed bias filter:                      168  (0.0122879); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.49
# Mc/sec: 1413.36
//
Query:       MMETSP1325-20131115|14109_1  [L=182]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-12   46.1   0.1    1.3e-11   44.5   0.0    1.7  2  PF07386.6 Protein of unknown function (DUF1499)


Domain annotation for each model (and alignments):
>> PF07386.6  Protein of unknown function (DUF1499)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.17   2.4e+03      35      52 ..      72      89 ..      43     117 .. 0.64
   2 !   44.5   0.0   9.4e-16   1.3e-11      75     117 ..     132     172 ..     128     173 .. 0.95

  Alignments for each domain:
  == domain 1    score: -1.5 bits;  conditional E-value: 0.17
    PF07386.6 35 speealaallavveelgw 52
                 + ++++  l+ v+e+ + 
  MMETSP1325-20131115|14109_1 72 DSKDTVTTLKSVLESYPQ 89
                 445555555555555554 PP

  == domain 2    score: 44.5 bits;  conditional E-value: 9.4e-16
    PF07386.6  75 FvDdveirvdpdearidvRSaSRvGksDlGvNrkRiealraal 117
                  F+Dd+e+ + +d  ++ +RSaSRvG+sD+GvN kR++ + ++l
  MMETSP1325-20131115|14109_1 132 FTDDLELDIAGD--TVTFRSASRVGDSDFGVNTKRVNWIAKEL 172
                  9*********99..***********************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       334  (0.0244295); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.54
# Mc/sec: 807.66
//
Query:       MMETSP1325-20131115|14115_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.3e-27   92.4   3.7    8.2e-27   92.2   2.6    1.0  1  PF05676.8 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
  ------ inclusion threshold ------
      0.038   13.6   2.2      0.042   13.4   1.5    1.3  1  PF08583.5 Cytochrome c oxidase biogenesis protein Cmc1 like


Domain annotation for each model (and alignments):
>> PF05676.8  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.2   2.6   1.2e-30   8.2e-27       3      64 ..      16      77 ..      14      79 .. 0.96

  Alignments for each domain:
  == domain 1    score: 92.2 bits;  conditional E-value: 1.2e-30
    PF05676.8  3 iatqeemeaaklpleqRDyCAhlLiklnkCrkdefylalkCeherheyekCeyddyvkRmke 64
                  a+q+ m +akl++++RD+CA+lLi+lnkCr +++y +++C herh yekC+y ++ kR++ 
  MMETSP1325-20131115|14115_1 16 QASQQAMYDAKLDVAYRDQCAALLIPLNKCRYETMYAPWECGHERHTYEKCQYLEFQKRVAA 77
                 79*********************************************************986 PP

>> PF08583.5  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.5   6.2e-06     0.042       8      52 ..      30      73 ..      15      82 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 6.2e-06
    PF08583.5  8 karkeCaelikafaeChkdrtlkavgkCneekeamkkClkeyrtd 52
                   r++Ca+l   + +C   +t+ a+++C  e++   kC   + ++
  MMETSP1325-20131115|14115_1 30 AYRDQCAALLIPLNKCRY-ETMYAPWECGHERHTYEKCQYLEFQK 73
                 5579************99.9******************7766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       326  (0.0238444); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|14120_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.38s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 402.25
//
Query:       MMETSP1325-20131115|14124_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       467  (0.0341574); expected 273.4 (0.02)
Passed bias filter:                      401  (0.02933); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.57
# Mc/sec: 256.16
//
Query:       MMETSP1325-20131115|14125_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       251  (0.0183587); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.33s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 568.44
//
Query:       MMETSP1325-20131115|14126_1  [L=180]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-21   72.9   0.1    1.3e-20   72.3   0.0    1.2  1  PF01176.14 Translation initiation factor 1A / IF-1


Domain annotation for each model (and alignments):
>> PF01176.14  Translation initiation factor 1A / IF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.0   9.9e-25   1.3e-20       2      63 ..      76     139 ..      75     140 .. 0.94

  Alignments for each domain:
  == domain 1    score: 72.3 bits;  conditional E-value: 9.9e-25
                  S--BE-EEE--------EEEEE.---EEE------.-HHHH------EEEE--B----EE--EE CS
   PF01176.14   2 egevigqVtkllGnglfeVele.dGkerlahipgK.frkkiwikrGDfVlVelsdydktkgrIi 63 
                   +e++gqV+++l+n++f+Vel+     +la i+gK ++++++i+ GD V+Vels+yd+t+grI 
  MMETSP1325-20131115|14126_1  76 VIELEGQVIESLPNAMFRVELQpTNSVVLATISGKiRKNYVRILVGDTVKVELSPYDLTRGRIX 139
                  589*****************97478999**********************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       246  (0.017993); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 937.70
//
Query:       MMETSP1325-20131115|14131_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-20   72.6   0.1    1.5e-20   72.3   0.1    1.0  1  PF06624.7 Ribosome associated membrane protein RAMP4


Domain annotation for each model (and alignments):
>> PF06624.7  Ribosome associated membrane protein RAMP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.1   1.1e-24   1.5e-20       1      60 [.       9      68 ..       9      70 .. 0.97

  Alignments for each domain:
  == domain 1    score: 72.3 bits;  conditional E-value: 1.1e-24
    PF06624.7  1 maskqrmkvanekfsknvtkRGnVpkslkkkeekypvgpilLglFiFVViGSaifqiiqs 60
                 m++ + +++++ek+ +n++kRGnV++  ++k ek + +p+l+g+FiFVV+GS+++qii  
  MMETSP1325-20131115|14131_1  9 MPPPRATRLRSEKHAENIKKRGNVSAGAVEKREKPALSPFLVGFFIFVVVGSSVLQIITT 68
                 8999******************************************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       440  (0.0321826); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|14134_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-05   22.6   3.6       0.42   10.7   0.4    3.8  3  PF00560.28 Leucine Rich Repeat
     0.0019   17.9   4.5        5.3    7.6   0.7    3.9  3  PF13504.1  Leucine rich repeat
     0.0026   17.3   0.7      0.053   13.1   0.1    2.7  2  PF13855.1  Leucine rich repeat
  ------ inclusion threshold ------
      0.032   14.1   4.0         15    5.9   0.9    3.8  3  PF13516.1  Leucine Rich repeat
      0.036   13.8   0.7         46    3.9   0.0    3.3  3  PF05725.7  FNIP Repeat
      0.095   12.2   9.6        1.8    8.1   0.4    3.3  2  PF12799.2  Leucine Rich repeats (2 copies)
       0.13   11.5   2.9         14    4.9   0.0    3.5  4  PF12841.2  YvrJ protein family


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0025       4.9       2      21 ..      14      34 ..      13      35 .. 0.84
   2 ?    3.2   0.1     0.059   1.2e+02       2       9 ..      37      44 ..      36      61 .. 0.89
   3 !   10.7   0.4   0.00021      0.42       2      22 .]      63      88 ..      62      88 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.0025
                 ESEEEETSS.BCB.CHHHHHHH CS
   PF00560.28  2 LeeLdLsgN.nlt.slppslsn 21
                 ++ LdL g+ +l+ ++ + l+ 
  MMETSP1325-20131115|14134_1 14 ITDLDLWGCeKLEgDIES-LKD 34
                 678**********99998.765 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.059
                 ESEEEETS CS
   PF00560.28  2 LeeLdLsg 9 
                 L++L+Ls+
  MMETSP1325-20131115|14134_1 37 LQVLNLSS 44
                 899***96 PP

  == domain 3    score: 10.7 bits;  conditional E-value: 0.00021
                 ESEEEETSS.BCB.C...HHHHHHHH CS
   PF00560.28  2 LeeLdLsgN.nlt.s...lppslsnL 22
                 ++ LdLs++ nl+ +   lp+s+ nL
  MMETSP1325-20131115|14134_1 63 ITDLDLSCCeNLEgNlkdLPKSITNL 88
                 678**********8888888887776 PP

>> PF13504.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0     0.003       5.8       3      14 ..      14      26 ..      12      36 .. 0.80
   2 ?    2.1   0.0      0.18   3.5e+02       3      10 ..      37      44 ..      35      60 .. 0.83
   3 !    7.6   0.7    0.0027       5.3       3      17 .]      63      82 ..      61      82 .. 0.65

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.003
    PF13504.1  3 LkeLdLsgnr.Lt 14
                  ++LdL+g++ L+
  MMETSP1325-20131115|14134_1 14 ITDLDLWGCEkLE 26
                 589******8665 PP

  == domain 2    score: 2.1 bits;  conditional E-value: 0.18
    PF13504.1  3 LkeLdLsg 10
                 L++L+Ls+
  MMETSP1325-20131115|14134_1 37 LQVLNLSS 44
                 899**986 PP

  == domain 3    score: 7.6 bits;  conditional E-value: 0.0027
    PF13504.1  3 LkeLdLsgnr.....LtsLP 17
                  ++LdLs+++     L++LP
  MMETSP1325-20131115|14134_1 63 ITDLDLSCCEnlegnLKDLP 82
                 589******66222355666 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   2.7e-05     0.053       2      57 ..      13      69 ..      12      74 .. 0.65
   2 ?    3.0   0.1      0.04        79       3      12 ..      63      73 ..      58      89 .. 0.57

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.7e-05
    PF13855.1  2 nLkeLdLsnN.rlk.vipdgaFkglsnLkvLdLs..gnnlksispeafkgLpsLreLnLs 57
                 ++++LdL+++ +l+ +i  +++k+++ L+vL+Ls  g  +  +  ++ +  +s++ L+Ls
  MMETSP1325-20131115|14134_1 13 SITDLDLWGCeKLEgDI--ESLKDCP-LQVLNLSsdGSYIPKFTGNIKDFPQSITDLDLS 69
                 6799******5555444..6******.*******43333344444444444555555555 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.04
    PF13855.1  3 LkeLdLsnN.r 12
                 +++LdLs++ +
  MMETSP1325-20131115|14134_1 63 ITDLDLSCCeN 73
                 44455554422 PP

>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.036        71       2      13 ..      12      23 ..      11      34 .. 0.76
   2 ?    2.6   0.0     0.088   1.7e+02       4      11 ..      37      44 ..      35      55 .. 0.86
   3 ?    5.9   0.9    0.0077        15       2      13 ..      61      72 ..      61      89 .. 0.81

  Alignments for each domain:
  == domain 1    score: 3.8 bits;  conditional E-value: 0.036
    PF13516.1  2 knLtsLdLsnNq 13
                 +++t+LdL ++ 
  MMETSP1325-20131115|14134_1 12 QSITDLDLWGCE 23
                 689*****9996 PP

  == domain 2    score: 2.6 bits;  conditional E-value: 0.088
    PF13516.1  4 LtsLdLsn 11
                 L++L+Ls+
  MMETSP1325-20131115|14134_1 37 LQVLNLSS 44
                 99****95 PP

  == domain 3    score: 5.9 bits;  conditional E-value: 0.0077
    PF13516.1  2 knLtsLdLsnNq 13
                 +++t+LdLs + 
  MMETSP1325-20131115|14134_1 61 QSITDLDLSCCE 72
                 689******995 PP

>> PF05725.7  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.03        59       7      19 ..       7      19 ..       4      22 .. 0.68
   2 ?    3.9   0.0     0.024        46      32      43 ..      59      70 ..      48      71 .. 0.77
   3 ?    2.9   0.1     0.047        92       9      17 ..      80      88 ..      73      89 .. 0.75

  Alignments for each domain:
  == domain 1    score: 3.6 bits;  conditional E-value: 0.03
    PF05725.7  7 igeLPsnleiLil 19
                 i  LP++++ L l
  MMETSP1325-20131115|14134_1  7 IKDLPQSITDLDL 19
                 4567777777655 PP

  == domain 2    score: 3.9 bits;  conditional E-value: 0.024
    PF05725.7 32 LPnSlkeLyFgy 43
                 +P+S++ L +++
  MMETSP1325-20131115|14134_1 59 FPQSITDLDLSC 70
                 688888888776 PP

  == domain 3    score: 2.9 bits;  conditional E-value: 0.047
    PF05725.7  9 eLPsnleiL 17
                  LP+++++L
  MMETSP1325-20131115|14134_1 80 DLPKSITNL 88
                 577888777 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.4   0.00094       1.8       4      33 ..      15      44 ..       2      61 .. 0.66
   2 ?    3.2   4.3     0.032        63       3      23 ..      63      88 ..      37      90 .] 0.61

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00094
    PF12799.2  4 evLdLsnNnIkdlppelanLpn..LktLnLsn 33
                 + LdL ++   +l++++ +L++  L++LnLs+
  MMETSP1325-20131115|14134_1 15 TDLDLWGCE--KLEGDIESLKDcpLQVLNLSS 44
                 445555542..333445555555599999985 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.032
    PF12799.2  3 LevLdLsnN.....nIkdlppelanL 23
                  + LdLs +     n+kdlp ++ nL
  MMETSP1325-20131115|14134_1 63 ITDLDLSCCenlegNLKDLPKSITNL 88
                 45566666655666666666666666 PP

>> PF12841.2  YvrJ protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.007        14      19      34 ..       2      17 ..       1      19 [. 0.86
   2 ?   -0.4   0.1      0.33   6.5e+02      20      27 ..      25      32 ..      23      34 .. 0.56
   3 ?   -0.5   0.0      0.35   6.8e+02      24      34 ..      56      66 ..      51      68 .. 0.55
   4 ?    4.2   0.0     0.012        24      20      35 ..      74      89 ..      72      90 .] 0.83

  Alignments for each domain:
  == domain 1    score: 4.9 bits;  conditional E-value: 0.007
    PF12841.2 19 RiEkkldaLtksIneL 34
                 ++E+ +++L +sI++L
  MMETSP1325-20131115|14134_1  2 KLEGNIKDLPQSITDL 17
                 6799999999999998 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.33
    PF12841.2 20 iEkkldaL 27
                 +E+++++L
  MMETSP1325-20131115|14134_1 25 LEGDIESL 32
                 56666665 PP

  == domain 3    score: -0.5 bits;  conditional E-value: 0.35
    PF12841.2 24 ldaLtksIneL 34
                 ++++ +sI++L
  MMETSP1325-20131115|14134_1 56 IKDFPQSITDL 66
                 34444566665 PP

  == domain 4    score: 4.2 bits;  conditional E-value: 0.012
    PF12841.2 20 iEkkldaLtksIneLs 35
                 +E+ l++L ksI++L+
  MMETSP1325-20131115|14134_1 74 LEGNLKDLPKSITNLN 89
                 5888999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       193  (0.0141164); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|14135_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 574.13
//
Query:       MMETSP1325-20131115|14127_1  [L=530]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-64  216.5   4.8    7.1e-64  215.9   3.3    1.2  1  PF03348.10 Serine incorporator (Serinc)


Domain annotation for each model (and alignments):
>> PF03348.10  Serine incorporator (Serinc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.9   3.3   5.2e-68   7.1e-64       6     429 .]      69     529 ..      62     529 .. 0.74

  Alignments for each domain:
  == domain 1    score: 215.9 bits;  conditional E-value: 5.2e-68
   PF03348.10   6 saacsllcsacksllksst......atrlayalllllnslvslimlspgv.ekklkkkilkfi...kvdCekse.....lvgysaVyRvsfalalfflllallllgvksskdpraaiqngfWflKilllivlivlaffiPneffl.evwkyvsviggflFiliqliLlvdfahsWaesw.....vekveeensklwkaaLlivtllmYllslvltvllyvfft...sdgCslnkffisinlilcvivsivsilpkvqeanPksgLlqasvvtlYitYltwsAlssepdkecnplknksegtrkasliigllltflavlYstlraasnss...........sgklklsedkveeqkkeern.esreeaakaaveegsepksa............kddekegvkysYslFHiilflaslYvamlLTnwfsp.eeele..tvgst.....waavwvkiisswvclllYiwtlvAPlllpdrdF 429
                   ++c   c++ ++++  +       +   +ya ++l+++++++ m+ +++  ++l +++       k  C +++     +++ysa yRvsf  ++ff ++a+l          + a ++  W lK++l+ +l+++  + P++ f    + +++ +g+f+Fi++q i+l+d  ++++e        e +ee+  + w ++L++ ++++Yl+++v++vllyv+ft   ++ C   ++f+si++il+++++++++     + +    Ll +s+v++Y +Ylt+ ++ss+p ++cnp+ ++ eg  ++sl++gl++tfl+++ +   ++++ +           s+++ l++  ++++k  +++  + + +++++   gs    a              d++ g+++    F ++++l s+Y  m+LTnw +p +  +e   v+++      +a+w+ i+++w+c+llYiwtlvAP+l pdrdF
  MMETSP1325-20131115|14127_1  69 MCLCAKRCCCASTSAGATEgehpypSGAGRYASMILMFLAIMYAMIWQFYwAEDLGEASTTAEawsKGGCVEGNakyplCLSYSASYRVSFCEVIFFGIMAILSG-------FKPATHDLGWDLKLVLFAILLIGITWAPSTIFDdHGYAWFARVGAFVFIVLQQIILLDGGYRLNELLkalggQEGYEEGW-NKWLVLLVGLSVGFYLTAFVGIVLLYVYFTgdeGNRCADSTTFVSITMILIMVFTALQLVS---DPENGHNLLVSSIVAAYAVYLTYVSVSSNPVEHCNPS-YEIEGSDTFSLVVGLTVTFLSICGTVYFSSKSVTglvggeggspaSNYVRLETVLTTDAKGPSNTgPDGNPTIQDQPVAGS----AysypkrsiamieAIDDDGGTAW---RFNMVMMLISMYWCMVLTNWANPvTGGAEetDVKEGsptggITAMWMNIVACWICVLLYIWTLVAPILYPDRDF 529
                  3445444444433322222001111223468887777777777776654415566654433224448899855567899**********************9876.......78899************************777625689***************************852222234455554.99****************************866678**********************998...4455556******************************.9********************9988888888888899*******9888888877333222222220222222222222222....11123444676544444445544...5889****************99975433312232221113379******************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       858  (0.062756); expected 273.4 (0.02)
Passed bias filter:                      272  (0.0198947); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.92u 0.40s 00:00:01.32 Elapsed: 00:00:00.59
# Mc/sec: 2152.66
//
Query:       MMETSP1325-20131115|14140_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-13   47.9   0.0    9.5e-13   47.9   0.0    1.0  1  PF00481.16 Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PF00481.16  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   6.9e-17   9.5e-13     167     221 ..      18      71 ..       4      72 .] 0.90

  Alignments for each domain:
  == domain 1    score: 47.9 bits;  conditional E-value: 6.9e-17
                  --BSBSB----HHHC---ST-TSB---EEEEEEE-TT--EEEEE----CCCCHHH CS
   PF00481.16 167 gsLavsRalGdfelkpkekeqlvsaePdvtsvkideedefliLasDGlwdvlsdq 221
                  g L+vsR lGd+ +k+k  + ++  ePd+ ++++d +  f+iLa+DG+wdvl+++
  MMETSP1325-20131115|14140_1  18 GGLSVSRTLGDVTVKQKA-PGVIGEEPDLFTTNLDTNCAFVILACDGVWDVLTSE 71 
                  559************965.889999***************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|14142_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.32s 00:00:00.70 Elapsed: 00:00:00.71
# Mc/sec: 378.02
//
Query:       MMETSP1325-20131115|14145_1  [L=135]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       183  (0.013385); expected 273.4 (0.02)
Passed bias filter:                      169  (0.012361); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 622.13
//
Query:       MMETSP1325-20131115|14146_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.39s 00:00:00.65 Elapsed: 00:00:00.55
# Mc/sec: 270.13
//
Query:       MMETSP1325-20131115|14147_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.3e-40  135.4   0.0    7.2e-40  135.0   0.0    1.2  1  PF03226.9 Yippee putative zinc-binding protein
  ------ inclusion threshold ------
       0.09   12.6   0.7       0.66    9.8   0.5    2.2  1  PF14279.1 HNH endonuclease
       0.21   11.0   0.8        0.4   10.1   0.6    1.4  1  PF06004.7 Bacterial protein of unknown function (DUF903)


Domain annotation for each model (and alignments):
>> PF03226.9  Yippee putative zinc-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.0   0.0   1.6e-43   7.2e-40       7     107 ..      76     175 ..      70     178 .. 0.94

  Alignments for each domain:
  == domain 1    score: 135.0 bits;  conditional E-value: 1.6e-43
    PF03226.9   7 eyleekksvysCkkCkthlalksdlisksfkgrtGrAyLfkkvvnvvvgkpeerelltGlhtvadilCkvCktvlGWkYekaeeesqkyKegkfilEkkkl 107
                  +yl e   v+sC+ C+th+++++++isksf+gr GrAyL +++ n+++g   er+l+tG+htvad++C+ C++vlGWkY++a+e sqkyK gkfi+Ek +l
  MMETSP1325-20131115|14147_1  76 TYL-EGPGVLSCTFCRTHITTHDQIISKSFHGRGGRAYLLNRIENFTCGPIAERMLITGMHTVADVHCAGCNQVLGWKYDDAMEPSQKYKIGKFIVEKGNL 175
                  566.678899***************************************************************************************9876 PP

>> PF14279.1  HNH endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.5   0.00015      0.66      23      49 ..     131     158 ..      86     174 .. 0.88

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.00015
    PF14279.1  23 igGklkikn.vCkkCnsklGqkvDakla 49 
                  i G  ++ +  C+ Cn+ lG k D++++
  MMETSP1325-20131115|14147_1 131 ITGMHTVADvHCAGCNQVLGWKYDDAME 158
                  67888888856*************9987 PP

>> PF06004.7  Bacterial protein of unknown function (DUF903)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.6   8.8e-05       0.4       9      37 ..     166     194 ..     163     195 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 8.8e-05
                  --EEEESS--EE-S----EEEEB----EE CS
    PF06004.7   9 GreivtdgkPklDkdtGmyeYkdadGkkv 37 
                  G+ iv +g    D+d+++ye +d+dG+++
  MMETSP1325-20131115|14147_1 166 GKFIVEKGNLNQDEDDDFYEREDEDGSQR 194
                  777888888889**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.31s 00:00:00.83 Elapsed: 00:00:00.60
# Mc/sec: 926.59
//
Query:       MMETSP1325-20131115|14155_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       126  (0.00921592); expected 273.4 (0.02)
Passed bias filter:                      120  (0.00877706); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 397.89
//
Query:       MMETSP1325-20131115|14156_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.8   0.0       0.02   14.2   0.0    1.2  1  PF02893.15 GRAM domain


Domain annotation for each model (and alignments):
>> PF02893.15  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.5e-06      0.02       2      47 ..      30      92 ..      29      98 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.2 bits;  conditional E-value: 1.5e-06
   PF02893.15  2 kfrktfklppeEklladydCylsts...................kgpvsGrlylTnnrlcFrsdk 47
                 +f++ f++  +E ll d++++l ts                        Grly+T ++l F+  +
  MMETSP1325-20131115|14156_1 30 AFHERFRVA-NEPLLLDCAATLRTSpqrtqqalnawaaegktagSTKDTGRLYVTFSHLWFDA-P 92
                 699999987.9*******************************9977889************87.5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.33s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 498.83
//
Query:       MMETSP1325-20131115|14154_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.34s 00:00:00.84 Elapsed: 00:00:00.53
# Mc/sec: 976.63
//
Query:       MMETSP1325-20131115|14158_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       279  (0.0204067); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 259.61
//
Query:       MMETSP1325-20131115|14150_1  [L=304]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.69    9.0  13.4       0.87    8.7   9.3    1.1  1  PF04652.11 Vta1 like


Domain annotation for each model (and alignments):
>> PF04652.11  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   9.3   6.4e-05      0.87     185     336 ..      54     206 ..      21     239 .. 0.50

  Alignments for each domain:
  == domain 1    score: 8.7 bits;  conditional E-value: 6.4e-05
                  ...........XXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......................................................XXXXXXXXXXXHHHHHH..... CS
   PF04652.11 185 geassasaspksaeesseslpsdplsa.edsdssapgldadeasaspseapssspgvpsfpspdeseasnkdsqlPsaPtyaqknssssqsvfPpsseeeetssssppsteapssppvqapsapakp..slssakPtaqsassaqaqplqsvapq 336
                  g+++ + ++++   e s +   d ++  + sd  +++  a+++ +++s++ +  ++++++ s  ++ +   +   +saP+ + +n++++ +++ p+   +++s ++p+s  a++sp+ ++p ap+ p  ++ ++ P+ ++++ a+  +++  +p 
  MMETSP1325-20131115|14150_1  54 GSPARPMVEEPVPGEASLTADGDTATSlDGSDLAFFSRGAEASVTAESDQGTMRHETSPTASVCSE-EARVERLATSAPSPSVINEPDEATTPAPTTA-SPPSTPPPRSVVADTSPQPHVPVAPVAPraPVVDSPPKIKKDPVAPRVSHPVHKPR 206
                  555555555555555555556666666666666777777777777777776666655554322222.2222333333333323333333333222222.33333334444444444444444444444433333333333333333222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       346  (0.0253072); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.54
# Mc/sec: 1349.06
//
Query:       MMETSP1325-20131115|14160_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.1   0.0       0.04   13.1   0.0    1.1  1  PF00078.22 Reverse transcriptase (RNA-dependent DNA polymerase)


Domain annotation for each model (and alignments):
>> PF00078.22  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.9e-06      0.04     123     161 ..      41      78 ..       8      79 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 2.9e-06
   PF00078.22 123 srglpqGsvlSPllfnlflhellkflrkafkprllyvrY 161
                    g +qG++l+ +l++l+ h ll ++++af p++ + ++
  MMETSP1325-20131115|14160_1  41 AVGARQGDPLGTMLYALVQHPLLLEVAEAF-PHIEVDAF 78 
                  5689************************98.99987666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       146  (0.0106788); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 391.24
//
Query:       MMETSP1325-20131115|14163_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.041   13.9   0.1      0.061   13.3   0.0    1.2  1  PF12033.3 Protein of unknown function (DUF3519)


Domain annotation for each model (and alignments):
>> PF12033.3  Protein of unknown function (DUF3519)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.5e-06     0.061      16      72 ..       8      62 ..       3      73 .. 0.80

  Alignments for each domain:
  == domain 1    score: 13.3 bits;  conditional E-value: 4.5e-06
    PF12033.3 16 ieyqnnirvvlkdkkkgeklknhyvitsfedyrdnsesletsplktkhelsplnsae 72
                 + + n++ + ++d  ++ k ++ + i+s + yr+   s   +p   + ++s+ +s+e
  MMETSP1325-20131115|14163_1  8 ATQRNDVGLFIEDDGDDHKRPDQFRIKSHDTYRESILSDAEEPS--EPKTSSTSSDE 62
                 568899****************************9999888888..45555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.32s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 696.62
//
Query:       MMETSP1325-20131115|14164_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 324.21
//
Query:       MMETSP1325-20131115|14165_1  [L=120]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-23   82.2   0.0      2e-23   82.0   0.0    1.1  1  PF03645.8 Tctex-1 family
  ------ inclusion threshold ------
       0.11   12.1   0.1       0.36   10.4   0.0    1.8  2  PF14444.1 S1-like


Domain annotation for each model (and alignments):
>> PF03645.8  Tctex-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.0   2.9e-27     2e-23       2     102 .]      14     120 .]      13     120 .] 0.95

  Alignments for each domain:
  == domain 1    score: 82.0 bits;  conditional E-value: 2.9e-27
                  HHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHCC..T-SCCEEEEEEEEE------EEEEEE-S-TTT---EEEEE........ESSSEEEEEEEE-EE- CS
    PF03645.8   2 kevkeiikevleeaLksvkYehekveqwskeiietilkklkelstkkryKyvvnctIvqkggrgmhvasgalWdektDgmvsvky........enkgldvvvtvfaval 102
                  ++++ ++k+v++ +L+++ Y+ + v+qw+  i + ++k+l+el  + ++Ky+v+ +I+q++g+g+++a++  Wd  +D+m+ v++         +  +++vvt f+va+
  MMETSP1325-20131115|14165_1  14 EKIEPLLKTVVDGVLQEAVYDDKMVAQWVDRINDGCMKALIEL--NLPFKYAVTAMIMQNNGAGVNTAVSSHWDSANDQMARVEWpekkksgqADPRMFCVVTAFGVAF 120
                  6788899************************************..67***************************************99999888889*********985 PP

>> PF14444.1  S1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   5.3e-05      0.36      24      54 ..      11      41 ..       7      44 .. 0.83
   2 ?   -2.0   0.0       0.4   2.7e+03      43      54 ..      51      62 ..      49      65 .. 0.79

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 5.3e-05
    PF14444.1 24 FqlsvvkGklpkvGdrVlveAsynpnmpfkW 54
                 F ++ +   l +v d Vl eA+y+ +m  +W
  MMETSP1325-20131115|14165_1 11 FDREKIEPLLKTVVDGVLQEAVYDDKMVAQW 41
                 56666777788999**************999 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 0.4
    PF14444.1 43 eAsynpnmpfkW 54
                 +A  + n pfk+
  MMETSP1325-20131115|14165_1 51 KALIELNLPFKY 62
                 788888999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      361  (0.0264043); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.37s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 625.14
//
Query:       MMETSP1325-20131115|14168_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|14173_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      392  (0.0286717); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.55
# Mc/sec: 296.28
//
Query:       MMETSP1325-20131115|14175_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      265  (0.0193827); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 252.03
//
Query:       MMETSP1325-20131115|14176_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      233  (0.0170421); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.36s 00:00:00.80 Elapsed: 00:00:00.55
# Mc/sec: 692.77
//
Query:       MMETSP1325-20131115|14177_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       310  (0.0226741); expected 273.4 (0.02)
Passed bias filter:                      213  (0.0155793); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.43s 00:00:00.76 Elapsed: 00:00:00.56
# Mc/sec: 363.73
//
Query:       MMETSP1325-20131115|14183_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-15   56.4   0.0    4.4e-15   56.1   0.0    1.1  1  PF10152.4 Predicted coiled-coil domain-containing protein (DUF2360)


Domain annotation for each model (and alignments):
>> PF10152.4  Predicted coiled-coil domain-containing protein (DUF2360)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.1   0.0   3.2e-19   4.4e-15       1      52 [.      27      78 ..      27      82 .. 0.96

  Alignments for each domain:
  == domain 1    score: 56.1 bits;  conditional E-value: 3.2e-19
    PF10152.4  1 vNkfvistvqfLNrFsaecEskLveiersLqqlElklqlLeakLasidglee 52
                 vN+f+++t++fLN+Fs e+E kL ++++++  +E+ l +Le+kL+s++gl +
  MMETSP1325-20131115|14183_1 27 VNNFIVNTTKFLNKFSGEAELKLSDVSNRITGIETCLAVLEKKLGSVPGLDY 78
                 8************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      170  (0.0124342); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.28u 0.39s 00:00:00.67 Elapsed: 00:00:00.45
# Mc/sec: 441.99
//
Query:       MMETSP1325-20131115|14192_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        0.1   12.6   0.0       0.14   12.1   0.0    1.2  1  PF00847.15 AP2 domain


Domain annotation for each model (and alignments):
>> PF00847.15  AP2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.1e-05      0.14      28      51 ..       8      32 ..       2      35 .. 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.1e-05
   PF00847.15 28 rkrfslgkfgt.eeAakaaiaarkk 51
                 +k+ +lg+f t  eA +a+ +a ++
  MMETSP1325-20131115|14192_1  8 SKQQYLGRFNTeLEANRAYQNALEA 32
                 4999*******88******998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       275  (0.0201141); expected 273.4 (0.02)
Passed bias filter:                      251  (0.0183587); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.43s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 327.67
//
Query:       MMETSP1325-20131115|14193_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       405  (0.0296226); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.42s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 432.28
//
Query:       MMETSP1325-20131115|14194_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00051   19.9   0.0    0.00065   19.6   0.0    1.2  1  PF13304.1  AAA domain
      0.002   17.9   0.0     0.0074   16.1   0.0    1.8  2  PF13521.1  AAA domain
     0.0031   16.8   0.0     0.0063   15.9   0.0    1.5  1  PF13555.1  P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.011   15.2   0.0      0.017   14.6   0.0    1.2  1  PF00308.13 Bacterial dnaA  protein
       0.03   13.4   0.0       0.04   12.9   0.0    1.2  1  PF03193.11 Protein of unknown function, DUF258
      0.032   14.2   0.0       0.05   13.6   0.0    1.3  1  PF13401.1  AAA domain
      0.033   13.5   0.0      0.057   12.8   0.0    1.3  1  PF10662.4  Ethanolamine utilisation - propanediol utilisation
      0.035   12.5   0.0      0.045   12.2   0.0    1.1  1  PF09818.4  Predicted ATPase of the ABC class
      0.038   12.9   0.0      0.044   12.7   0.0    1.1  1  PF13175.1  AAA ATPase domain
      0.049   13.0   0.0      0.075   12.4   0.0    1.2  1  PF00006.20 ATP synthase alpha/beta family, nucleotide-binding domain
      0.049   11.9   0.0      0.069   11.4   0.0    1.2  1  PF13166.1  AAA domain
      0.056   13.6   0.0      0.084   13.0   0.0    1.2  1  PF13476.1  AAA domain
      0.065   13.9   0.0       0.28   11.8   0.0    1.9  2  PF13207.1  AAA domain
       0.08   12.4   0.0       0.18   11.2   0.0    1.6  2  PF05729.7  NACHT domain
       0.11   12.0   0.3        0.8    9.2   0.1    2.0  2  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
       0.12   11.1   0.0       0.15   10.7   0.0    1.2  1  PF00931.17 NB-ARC domain
       0.12   12.6   0.0       0.22   11.7   0.0    1.5  2  PF13191.1  AAA ATPase domain


Domain annotation for each model (and alignments):
>> PF13304.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   8.1e-07   0.00065       3      21 ..     107     125 ..     106     145 .. 0.75

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 8.1e-07
    PF13304.1   3 viiGpNgsGKSnlLkaldf 21 
                  ++iG Ng+GK++l++a+d 
  MMETSP1325-20131115|14194_1 107 GLIGGNGVGKTTLMRAIDN 125
                  59***************63 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.3   1.1e+03     106     118 ..      55      67 ..      27      88 .. 0.47
   2 !   16.1   0.0   9.2e-06    0.0074       4      35 ..     108     140 ..     105     146 .. 0.81

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 1.3
    PF13521.1 106 ekrydlvfllppe 118
                  +++ d ++     
  MMETSP1325-20131115|14194_1  55 NEKCDEIIAAAAK 67 
                  2234443333332 PP

  == domain 2    score: 16.1 bits;  conditional E-value: 9.2e-06
    PF13521.1   4 itGgpstGKTtlleaLaargypvv.pEvarevl 35 
                  ++Gg ++GKTtl++a+ +++ + +  +v r+++
  MMETSP1325-20131115|14194_1 108 LIGGNGVGKTTLMRAIDNNQLEEFpNDVLRTIF 140
                  89**************99988766567777766 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   7.8e-06    0.0063      18      43 ..      99     123 ..      92     125 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.9 bits;  conditional E-value: 7.8e-06
    PF13555.1  18 eidpkgkntlltGasGsGKSTllDAi 43 
                   ++ kg+ + l+G +G+GK+Tl+ Ai
  MMETSP1325-20131115|14194_1  99 HLK-KGRRYGLIGGNGVGKTTLMRAI 123
                  454.667889*************997 PP

>> PF00308.13  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.1e-05     0.017      40      70 ..     109     141 ..     101     146 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 2.1e-05
                  E-------HHHHHH---HHHHHSSSS..-EEEE CS
   PF00308.13  40 ygevGlGKtHLLqaignevlenapna..rvvYl 70 
                   g+ G+GKt L++ai+n+ le++pn   r +++
  MMETSP1325-20131115|14194_1 109 IGGNGVGKTTLMRAIDNNQLEEFPNDvlRTIFV 141
                  5999******************99851144555 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     5e-05      0.04      27      59 ..      94     127 ..      80     144 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 5e-05
                  HHHHHHCTT.SBEEEE-------HHHHHHH---- CS
   PF03193.11  27 eelaellkd.ktsvlvGqSGvGKSsLinallpel 59 
                  ++ + +lk+ +   l+G  GvGK++L+ a+++++
  MMETSP1325-20131115|14194_1  94 QNTRMHLKKgRRYGLIGGNGVGKTTLMRAIDNNQ 127
                  56666777778889***************99876 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   6.2e-05      0.05       9      45 ..     108     143 ..     101     147 .] 0.75

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 6.2e-05
    PF13401.1   9 vtGesGvGKTtllrrlarqldeeaeaaekarvvfvea 45 
                  ++G  GvGKTtl+r + +++  e+++++  r++fve 
  MMETSP1325-20131115|14194_1 108 LIGGNGVGKTTLMRAIDNNQL-EEFPNDVLRTIFVES 143
                  6899************99754.344444677777765 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     7e-05     0.057       6      27 ..     108     129 ..     104     137 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 7e-05
    PF10662.4   6 liGkvgaGKTtLtqalkgeelk 27 
                  liG  g+GKTtL++a+++++l+
  MMETSP1325-20131115|14194_1 108 LIGGNGVGKTTLMRAIDNNQLE 129
                  8*****************9985 PP

>> PF09818.4  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.6e-05     0.045     238     275 ..      96     134 ..      75     145 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 5.6e-05
    PF09818.4 238 sGlgipkG.itlIvGggyhGKsTLLeAleaGvydhipgD 275
                  + + ++kG    ++Gg+  GK+TL++A+++ + +  p+D
  MMETSP1325-20131115|14194_1  96 TRMHLKKGrRYGLIGGNGVGKTTLMRAIDNNQLEEFPND 134
                  5688888876778999999**********9999988888 PP

>> PF13175.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   5.5e-05     0.044      27      56 ..     108     134 ..      80     146 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 5.5e-05
    PF13175.1  27 iiGeNgsGKttILealeklknrknmlfikk 56 
                  +iG Ng+GKtt++ a+   +n++ ++f ++
  MMETSP1325-20131115|14194_1 108 LIGGNGVGKTTLMRAI---DNNQLEEFPND 134
                  89**************...66666666665 PP

>> PF00006.20  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   9.3e-05     0.075      13      40 ..     101     128 ..      95     142 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 9.3e-05
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00006.20  13 vqGqttlipGafgcGktvisqslsknsn 40 
                   +G + +++G+ g+Gkt+++  + +n+ 
  MMETSP1325-20131115|14194_1 101 KKGRRYGLIGGNGVGKTTLMRAIDNNQL 128
                  68********************999984 PP

>> PF13166.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   8.6e-05     0.069       8      48 ..      96     135 ..      90     145 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 8.6e-05
    PF13166.1   8 ngeelddfkkvNlIYGrNGsGKtTlSrllrslelkeiseky 48 
                  +  +l++ +++ lI G NG GKtTl r +++ +l+e  ++ 
  MMETSP1325-20131115|14194_1  96 TRMHLKKGRRYGLI-GGNGVGKTTLMRAIDNNQLEEFPNDV 135
                  55678888999999.99**************9998887775 PP

>> PF13476.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0    0.0001     0.084      24      39 ..     108     123 ..      93     124 .. 0.94

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 0.0001
    PF13476.1  24 ItGpNGsGKTTildAi 39 
                  ++G NG GKTT++ Ai
  MMETSP1325-20131115|14194_1 108 LIGGNGVGKTTLMRAI 123
                  589************9 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.9   1.6e+03      55      77 ..      59      75 ..      21     100 .. 0.56
   2 ?   11.8   0.0   0.00034      0.28       2      20 ..     106     124 ..     105     136 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 1.9
                 B-HHHHHHHH....H..HHHHHH CS
    PF13207.1 55 dllaaildglaakkdtlswvidg 77
                 d++ a ++++      +++v+++
  MMETSP1325-20131115|14194_1 59 DEIIAAAAKE------EGYVMQD 75
                 2222222222......2255555 PP

  == domain 2    score: 11.8 bits;  conditional E-value: 0.00034
                  E--B--TT---HHHHHHHH CS
    PF13207.1   2 iaitGppGsGKsTlakeLa 20 
                  ++++G  G+GK+Tl++++ 
  MMETSP1325-20131115|14194_1 106 YGLIGGNGVGKTTLMRAID 124
                  7899************985 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.9   2.4e+03      39      71 ..      16      46 ..       9      57 .. 0.69
   2 ?   11.2   0.0   0.00022      0.18       5      22 ..     108     125 ..     104     145 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.2 bits;  conditional E-value: 2.9
    PF05729.7 39 flslrelsrsknarsladlLfsqlpepaapvse 71
                 ++ l++++r++   +++d+ +++++e  +  +e
  MMETSP1325-20131115|14194_1 16 HFKLASDKRIE--EGVCDMAVKPYLEALMGAEE 46
                 56667777765..37888888888887776666 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00022
    PF05729.7   5 lqGeaGsGKTtLlqklas 22 
                  l G +G+GKTtL++ + +
  MMETSP1325-20131115|14194_1 108 LIGGNGVGKTTLMRAIDN 125
                  78************9855 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.47   3.8e+02      91     111 ..      77     100 ..      43     105 .. 0.62
   2 ?    9.2   0.1   0.00099       0.8       4      20 ..     107     123 ..     104     130 .. 0.83

  Alignments for each domain:
  == domain 1    score: 0.6 bits;  conditional E-value: 0.47
                  -...-S-EEEE---S.--SEEEEE CS
    PF03205.9  91 s...vDlvlveGfkspkenpkivi 111
                  +   +D+ l +G k   +n ++++
  MMETSP1325-20131115|14194_1  77 DlchIDFSLAYGGKVLLQNTRMHL 100
                  244589999999888777777655 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00099
                  EEE-------HHHHHHH CS
    PF03205.9   4 avvGpkdsGKTtliekl 20 
                   ++G  ++GKTtl++ +
  MMETSP1325-20131115|14194_1 107 GLIGGNGVGKTTLMRAI 123
                  6799**********987 PP

>> PF00931.17  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00019      0.15      23      43 ..     107     127 ..      93     143 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00019
                  EEE-------HHHHHHHTS-S CS
   PF00931.17  23 glvGmgGvGKttlakqvykde 43 
                  gl G  GvGKttl++++ +++
  MMETSP1325-20131115|14194_1 107 GLIGGNGVGKTTLMRAIDNNQ 127
                  78999************9874 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       7.6   6.1e+03     114     127 ..      54      67 ..      36      85 .. 0.55
   2 ?   11.7   0.0   0.00028      0.22      28      52 ..     108     127 ..      91     139 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 7.6
    PF13191.1 114 lqalvalldaalar 127
                  +++ ++++ aa+a+
  MMETSP1325-20131115|14194_1  54 FNEKCDEIIAAAAK 67 
                  33333333333333 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00028
    PF13191.1  28 vtGpsGiGKSsLlrelakpillerl 52 
                  ++G  G+GK++L+r+     ++++ 
  MMETSP1325-20131115|14194_1 108 LIGGNGVGKTTLMRA-----IDNNQ 127
                  7999***********.....66554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       382  (0.0279403); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        77  (0.00563195); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.46u 0.43s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 677.43
//
Query:       MMETSP1325-20131115|14190_1  [L=334]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-15   54.3   1.2      8e-13   47.8   0.1    2.4  2  PF00635.21 MSP (Major sperm protein) domain
  ------ inclusion threshold ------
      0.017   14.8   0.4      0.042   13.5   0.1    1.7  2  PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
      0.058   12.8   0.1       0.13   11.7   0.1    1.7  1  PF07610.6  Protein of unknown function (DUF1573)


Domain annotation for each model (and alignments):
>> PF00635.21  MSP (Major sperm protein) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.1   1.8e-16     8e-13      25      73 ..      19      69 ..       6      76 .. 0.83
   2 !    4.9   0.1    0.0039        18      71      93 ..     132     153 ..     128     167 .. 0.69

  Alignments for each domain:
  == domain 1    score: 47.8 bits;  conditional E-value: 1.8e-16
                 EEEB-SSS..-EEEEEEES-CCCEEEESSEEEB----EEEEEEEEE----- CS
   PF00635.21 25 klkNtskk..rvaFKvKttnpkkyrvrPvyGivkpgesveitvtrqpqdke 73
                 + +N+s+    va+KvKtt+pk+y+vrP+ G++ pg+s++it t+  +d+e
  MMETSP1325-20131115|14190_1 19 TATNNSTGdaVVAYKVKTTAPKRYVVRPPQGVILPGKSAKITLTMVGKDAE 69
                 556666543379********************************9987665 PP

  == domain 2    score: 4.9 bits;  conditional E-value: 0.0039
                  ---TTS.ECEEEEEEEEE--TT- CS
   PF00635.21  71 dkededkkkdkfviqyleakdde 93 
                  d++d+++ kdkf++q++   ++ 
  MMETSP1325-20131115|14190_1 132 DYDDGES-KDKFLVQTTDLAPSY 153
                  5666665.*********994443 PP

>> PF09038.5  Tumour suppressor p53-binding protein-1 Tudor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   9.1e-06     0.042       5      42 ..     101     138 ..      98     150 .. 0.91
   2 ?   -2.4   0.0      0.78   3.6e+03      81     102 ..     252     273 ..     244     290 .. 0.68

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 9.1e-06
                  -----EEE-ST---BB---EEEE-----EEEE-----E CS
    PF09038.5   5 vglrvvakwssngyfysgkitkdagegkykllfddgye 42 
                  vg r   +w  +  +y+gki k   +g + + +ddg  
  MMETSP1325-20131115|14190_1 101 VGARCEVRWQGKERYYAGKIRKCNEDGTFDVDYDDGES 138
                  7999999****************************975 PP

  == domain 2    score: -2.4 bits;  conditional E-value: 0.78
                  E----EEEEEE----EEEEEGG CS
    PF09038.5  81 keseelyysiekdgqrkwykrk 102
                  k  + + y+++  g+r++ +  
  MMETSP1325-20131115|14190_1 252 KYDDLVAYTVNLTGDRDYLNNE 273
                  3444456899999999887653 PP

>> PF07610.6  Protein of unknown function (DUF1573)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   2.9e-05      0.13      25      45 .]      43      63 ..      21      63 .. 0.91

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 2.9e-05
    PF07610.6 25 tpelskkpIaPGesgeikvty 45
                 ++ +++ +I+PG+s++i++t+
  MMETSP1325-20131115|14190_1 43 VVRPPQGVILPGKSAKITLTM 63
                 6789999***********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       824  (0.0602692); expected 273.4 (0.02)
Passed bias filter:                      641  (0.0468841); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.38s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 1539.20
//
Query:       MMETSP1325-20131115|14202_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 343.63
//
Query:       MMETSP1325-20131115|14203_1  [L=49]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.92
# Mc/sec: 127.63
//
Query:       MMETSP1325-20131115|14199_1  [L=283]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.36s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1356.34
//
Query:       MMETSP1325-20131115|14216_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.49
# Mc/sec: 308.10
//
Query:       MMETSP1325-20131115|14211_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.098   12.8   2.8       0.45   10.7   0.2    2.4  2  PF02895.9 Signal transducing histidine kinase, homodimeric domain


Domain annotation for each model (and alignments):
>> PF02895.9  Signal transducing histidine kinase, homodimeric domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.019   2.7e+02      51      65 ..       6      20 ..       2      27 .. 0.78
   2 ?   10.7   0.2   3.3e-05      0.45       5      37 ..      96     137 ..      93     163 .. 0.74

  Alignments for each domain:
  == domain 1    score: 1.9 bits;  conditional E-value: 0.019
    PF02895.9 51 lqqlerisreLqeav 65
                 +++l  i++eLqe v
  MMETSP1325-20131115|14211_1  6 ASRLRLILQELQEHV 20
                 566777999999987 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 3.3e-05
    PF02895.9   5 RVdverLDqLmnlvGELvitkarleqlldelr.........e 37 
                  RV ve L  L++ + E+v++k  +e+ll++++          
  MMETSP1325-20131115|14211_1  96 RVLVESLGALVEAARETVVNKGLFEHLLQGVEhahlldlnlL 137
                  999999*************************95555544441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       268  (0.0196021); expected 273.4 (0.02)
Passed bias filter:                      185  (0.0135313); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.34s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 899.97
//
Query:       MMETSP1325-20131115|14218_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.34s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 858.69
//
Query:       MMETSP1325-20131115|14220_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1979  (0.144748); expected 273.4 (0.02)
Passed bias filter:                      926  (0.0677297); expected 273.4 (0.02)
Passed Vit filter:                       193  (0.0141164); expected 13.7 (0.001)
Passed Fwd filter:                        30  (0.00219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.43s 00:00:00.87 Elapsed: 00:00:00.54
# Mc/sec: 204.13
//
Query:       MMETSP1325-20131115|14225_1  [L=254]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-15   56.1   0.0    3.9e-15   55.7   0.0    1.1  1  PF05226.6 CHASE2 domain


Domain annotation for each model (and alignments):
>> PF05226.6  CHASE2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.0   2.8e-19   3.9e-15      22     252 ..      29     247 ..       2     253 .. 0.80

  Alignments for each domain:
  == domain 1    score: 55.7 bits;  conditional E-value: 2.8e-19
    PF05226.6  22 elrlyDllvrlrsappesdeeiviVaIDeaslaeigrwpwpRellAelldkLaaagakaigfDivfdepdtsnpaddaaLaealarapnrvvlgkfleesedaaraeappaaapelqeaaaglGfvnvvlDadg.....vvRrvpl.lealggsaypslalalaraalgakpiraelkkaeakdglklasipvdaggqllinyrgp.........agsfptvsaadvlngkvppelfrdkiVliGa 252
                  +  ++D++++   ++p +de++v+V++  +          pR+ +A lld ++++ +++ig+D++fd   ++   +d  L e+l r +n+v++ k++++ ++++  + +++ +  + + +a   ++n+++Dad      + R+ p  l+ ++gs  +s+ + la  +  +k++++ ++ +e+                  inyrg+         ++++  + ++d+ +g++ pe ++dk+V+  +
  MMETSP1325-20131115|14225_1  29 DMEFTDIYFSQLLDDPVADENVVMVNVGLE----------PRAGIAILLDSISKYDPAVIGVDLIFDYLKED-TLGDIMLSESLGRVENLVMVNKLSYTLQNTSGIQDSVEWSHPFFTYNAVPAYANLITDADVqedlkMCRKFPPqLNLVDGSNHVSFGVTLASYLSAEKAEKFLSRGNEV----------------EVINYRGNvldygatkfGNKYFALDVWDIYSGNFVPEIIKDKVVIFCF 247
                  7789999999996666779*******9998..........9*************************877333.359****************99998877777765555544344445588999999999999888999*******866688899*********999999999999998887................7899999988877555555566666677778*************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.35s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 1217.35
//
Query:       MMETSP1325-20131115|14230_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-17   62.0   0.0    4.4e-17   61.9   0.0    1.0  1  PF00885.14 6,7-dimethyl-8-ribityllumazine synthase


Domain annotation for each model (and alignments):
>> PF00885.14  6,7-dimethyl-8-ribityllumazine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.0   3.2e-21   4.4e-17       3      65 ..       2      64 .]       1      64 [] 0.97

  Alignments for each domain:
  == domain 1    score: 61.9 bits;  conditional E-value: 3.2e-21
                 ---E-EEEE-TTHHHHHHHH---HHHHHH----GGGEEEEEE---TTHHHH----TT-TT--- CS
   PF00885.14  3 klriaivvarfneeitdrllegaleelkeagvkeeeidvvrVPGafElPlaakklaksgkyda 65
                 + ri+i+++r+n ei+++l +g+ ++lk+ gvkee+i   +VPGafElP+ a+ la s+ +da
  MMETSP1325-20131115|14230_1  2 NCRIGIITTRWNPEIIKSLQAGCKDTLKDLGVKEENIFETEVPGAFELPISARFLALSQTVDA 64
                 579*****************************************************9999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|14238_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       329  (0.0240638); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|14241_1  [L=132]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.099   12.1   0.0       0.18   11.3   0.0    1.4  1  PF03607.12 Doublecortin


Domain annotation for each model (and alignments):
>> PF03607.12  Doublecortin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.3e-05      0.18      17      38 ..      72      94 ..      70     104 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.3e-05
   PF03607.12 17 diTekvklpsG.VrklytldGkk 38
                  +++ vkl +G Vr+ly + G+k
  MMETSP1325-20131115|14241_1 72 PVSQPVKLATGqVRTLYVPLGTK 94
                 58999************998844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      223  (0.0163107); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 645.55
//
Query:       MMETSP1325-20131115|14239_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      239  (0.017481); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.33s 00:00:00.80 Elapsed: 00:00:00.56
# Mc/sec: 811.40
//
Query:       MMETSP1325-20131115|14247_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 323.95
//
Query:       MMETSP1325-20131115|14248_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       758  (0.0554418); expected 273.4 (0.02)
Passed bias filter:                      553  (0.0404476); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.53
# Mc/sec: 411.45
//
Query:       MMETSP1325-20131115|14249_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-05   23.0   0.1    5.6e-05   22.1   0.1    1.4  1  PF13202.1  EF hand
    8.2e-05   21.5   0.1    0.00019   20.3   0.1    1.6  1  PF00036.27 EF hand
    0.00012   21.7   0.2    0.00014   21.4   0.1    1.1  1  PF12763.2  Cytoskeletal-regulatory complex EF hand
     0.0015   18.5   0.8     0.0022   17.9   0.6    1.5  1  PF13499.1  EF-hand domain pair
     0.0019   18.0   1.8     0.0024   17.7   1.3    1.2  1  PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
      0.003   17.0   0.1      0.005   16.3   0.1    1.3  1  PF13833.1  EF-hand domain pair
     0.0036   16.9   0.2     0.0044   16.6   0.1    1.1  1  PF02520.12 Domain of unknown function DUF148
  ------ inclusion threshold ------
      0.034   13.9   0.1       0.14   12.0   0.0    1.9  2  PF13405.1  EF-hand domain
       0.12   12.0   0.5       0.16   11.5   0.3    1.3  1  PF00226.26 DnaJ domain


Domain annotation for each model (and alignments):
>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.1   3.7e-08   5.6e-05       4      21 ..      59      76 ..      56      79 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.1 bits;  conditional E-value: 3.7e-08
                 HHHHH--S----B-HHHH CS
    PF13202.1  4 tFrafDlNgDGkIsreEL 21
                 +F+ +D++gDG++s+ E+
  MMETSP1325-20131115|14249_1 59 MFENADMDGDGQLSMNEF 76
                 699**************9 PP

>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.1   1.3e-07   0.00019       4      23 ..      58      77 ..      55      79 .. 0.90

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.3e-07
                 HHHHHHCTTTSSEBEHHHHH CS
   PF00036.27  4 eaFkefDkDgdGkIsfeEfk 23
                  +F+ +D DgdG++s +Ef 
  MMETSP1325-20131115|14249_1 58 TMFENADMDGDGQLSMNEFA 77
                 69*****************6 PP

>> PF12763.2  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   9.2e-08   0.00014      10      68 ..      22      79 ..      14      89 .. 0.81

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 9.2e-08
    PF12763.2 10 kkyweifsglkpednkltgdkvapvlknskleedklekiwdladidedgkldfeefcia 68
                 ++y e f+   +e++  +++   + l+n k  e+ l  +++ ad+d dg+l ++ef++a
  MMETSP1325-20131115|14249_1 22 RQYREFFEEHPDEQD-KAEETRETHLQNLKEAEHSLITMFENADMDGDGQLSMNEFALA 79
                 457777776555555.5666678889******************************986 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.6   1.5e-06    0.0022      36      63 ..      50      77 ..      10      79 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.9 bits;  conditional E-value: 1.5e-06
    PF13499.1 36 eevrevldyifkelDkngdGvlsfeEfl 63
                 +e +++l   f+++D +gdG+ls++Ef+
  MMETSP1325-20131115|14249_1 50 KEAEHSLITMFENADMDGDGQLSMNEFA 77
                 4455566677****************96 PP

>> PF10591.4  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   1.3   1.6e-06    0.0024      19      77 ..      19      77 ..       3      88 .. 0.65

  Alignments for each domain:
  == domain 1    score: 17.7 bits;  conditional E-value: 1.6e-06
    PF10591.4 19 wlknvlaqlkerdeekehseelekeaekknskeckeaveWkFnqlDtnkdkvlsksEla 77
                  ++  ++++ e++ +++ ++e+++e++ +n ke ++++  +F++ D++ d++ls +E+a
  MMETSP1325-20131115|14249_1 19 AIERQYREFFEEHPDEQDKAEETRETHLQNLKEAEHSLITMFENADMDGDGQLSMNEFA 77
                 44444555555555555666666677777777777777777777777777777777765 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   3.3e-06     0.005      29      47 ..      58      76 ..      45      77 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.3 bits;  conditional E-value: 3.3e-06
    PF13833.1 29 ilfrefDtdgdGkisfeEF 47
                 ++f  +D+dgdG +s +EF
  MMETSP1325-20131115|14249_1 58 TMFENADMDGDGQLSMNEF 76
                 89***************** PP

>> PF02520.12  Domain of unknown function DUF148
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   2.9e-06    0.0044      33      79 ..      19      65 ..       8      72 .. 0.90

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 2.9e-06
   PF02520.12 33 gvadqyeeFkkkvkakkeeleknvtavisnLssvdaklsaIldnksl 79
                  ++ qy eF ++  ++++++e+++++ ++nL +++ +l   ++n + 
  MMETSP1325-20131115|14249_1 19 AIERQYREFFEEHPDEQDKAEETRETHLQNLKEAEHSLITMFENADM 65
                 3999***************************************9986 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0         1   1.5e+03       2       9 ..      24      31 ..      23      37 .. 0.76
   2 ?   12.0   0.0   9.2e-05      0.14       4      23 ..      58      77 ..      55      85 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 1
                 HH---GCC CS
    PF13405.1  2 lreaFklf 9 
                 +re+F+ +
  MMETSP1325-20131115|14249_1 24 YREFFEEH 31
                 7999*988 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 9.2e-05
                 ---GCC-------B---HHH CS
    PF13405.1  4 eaFklfDkdgdGkidaeELr 23
                   F+  D dgdG+++ +E+ 
  MMETSP1325-20131115|14249_1 58 TMFENADMDGDGQLSMNEFA 77
                 579999************96 PP

>> PF00226.26  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   0.00011      0.16      11      54 ..      14      56 ..       6      65 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00011
                 T--HHHHHHHHHHHHHHT-TTT--SCCHHHHHHHHHHHHHHHHH CS
   PF00226.26 11 dasdeeIkkaYrklalkyHPDknkddeeeaeekfkeineAyevL 54
                 d +++ I ++Yr+   + HPD  ++ ee+ e   + ++eA + L
  MMETSP1325-20131115|14249_1 14 DRNKAAIERQYREFF-EEHPDEQDKAEETRETHLQNLKEAEHSL 56
                 678999******976.66****8888888899999999997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1031  (0.0754096); expected 273.4 (0.02)
Passed bias filter:                      723  (0.0528818); expected 273.4 (0.02)
Passed Vit filter:                        73  (0.00533938); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.41u 0.38s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 479.27
//
Query:       MMETSP1325-20131115|14251_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.17   11.1   3.3       0.14   11.3   2.3    1.1  1  PF05308.6 Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> PF05308.6  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.3     1e-05      0.14     185     203 ..      51      69 ..      14      74 .] 0.74

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1e-05
    PF05308.6 185 elevppppppPpPlpavsl 203
                   +++p++pppPpP+p++  
  MMETSP1325-20131115|14251_1  51 GSVAPSSPPPPPPPPPSGS 69 
                  4556666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 334.59
//
Query:       MMETSP1325-20131115|14231_1  [L=296]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-12   47.3   0.5    1.9e-12   46.7   0.3    1.3  1  PF03382.9  Mycoplasma protein of unknown function, DUF285
    0.00013   21.5   0.1    0.00025   20.5   0.1    1.5  1  PF12937.2  F-box-like
  ------ inclusion threshold ------
      0.069   12.1   6.8        1.3    8.1   0.1    2.6  3  PF00641.13 Zn-finger in Ran binding protein and others


Domain annotation for each model (and alignments):
>> PF03382.9  Mycoplasma protein of unknown function, DUF285
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   0.3   4.1e-16   1.9e-12      15      62 ..     232     279 ..     222     293 .. 0.63

  Alignments for each domain:
  == domain 1    score: 46.7 bits;  conditional E-value: 4.1e-16
    PF03382.9  15 qdiskwdtsnvtdmssmFsgakkfnqdiskWdtsnVtnmsemFsgats 62 
                   +i +wdts + +m+++F g+++fn+dis Wd+s+V  m+++F++ t+
  MMETSP1325-20131115|14231_1 232 GHIASWDTSDIVSMENLFFGQHDFNDDISRWDVSSVRYMDGIFHNVTR 279
                  456666666666666666666666666666666666666666666554 PP

>> PF12937.2  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   5.5e-08   0.00025      13      42 ..     111     141 ..     106     146 .. 0.89

  Alignments for each domain:
  == domain 1    score: 20.5 bits;  conditional E-value: 5.5e-08
                  HTTS-.HHHHHHH----HHHHHHHHT-HHHH CS
    PF12937.2  13 FsyLp.psdLlrlalVCrrWrrvaldtlLWr 42 
                  F++L+ p+dLlr++   rrWr++a  +++Wr
  MMETSP1325-20131115|14231_1 111 FHFLDgPRDLLRASTANRRWRELATANSVWR 141
                  89996477****************999***9 PP

>> PF00641.13  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.3   0.00044         2       2      12 ..       2      12 ..       2      13 .. 0.87
   2 ?    8.1   0.1   0.00028       1.3      20      29 ..      23      32 ..      19      33 .. 0.90
   3 ?   -3.6   0.0       1.2   5.5e+03      14      20 ..     137     143 ..     136     143 .. 0.89

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00044
   PF00641.13  2 egdWdCskClv 12
                 ++ W C++C++
  MMETSP1325-20131115|14231_1  2 AKPWSCDVCTY 12
                 589******97 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00028
   PF00641.13 20 kCvaCqapkp 29
                 +C +C++pkp
  MMETSP1325-20131115|14231_1 23 ACSMCDTPKP 32
                 7********9 PP

  == domain 3    score: -3.6 bits;  conditional E-value: 1.2
   PF00641.13  14 Nfawstk 20 
                  N+ w++k
  MMETSP1325-20131115|14231_1 137 NSVWRMK 143
                  999*997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       423  (0.0309391); expected 273.4 (0.02)
Passed bias filter:                      283  (0.0206992); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.51
# Mc/sec: 1390.83
//
Query:       MMETSP1325-20131115|14260_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      194  (0.0141896); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 443.58
//
Query:       MMETSP1325-20131115|14266_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-13   47.6   0.0    8.6e-13   47.6   0.0    1.0  1  PF00076.17 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
    2.3e-09   37.0   0.0    2.4e-09   36.9   0.0    1.0  1  PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)


Domain annotation for each model (and alignments):
>> PF00076.17  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.0   1.3e-16   8.6e-13       2      48 ..       6      53 ..       5      54 .] 0.97

  Alignments for each domain:
  == domain 1    score: 47.6 bits;  conditional E-value: 1.3e-16
                 EEESSTTTSSHHHHHHHHCTCTCEEEEEEEES.TTSSEE-EEEEEESS CS
   PF00076.17  2 fVgnLppdvteeeLkelFskfGpiesiklvrd.etgrskgfafVeFes 48
                  Vg+L+++vt+  L e+Fs +G + +++lv d + g skgf++Ve+++
  MMETSP1325-20131115|14266_1  6 HVGGLTRNVTQAHLTEIFSTYGAVSNAELVVDrRVGLSKGFGYVEYKN 53
                 59********************************************98 PP

>> PF14259.1  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   3.5e-13   2.4e-09       1      48 [.       5      53 ..       5      54 .] 0.97

  Alignments for each domain:
  == domain 1    score: 36.9 bits;  conditional E-value: 3.5e-13
    PF14259.1  1 lyvrglppsvteedlreffspygkvegvriprnkd.grgrgfAfvefes 48
                 l+v+gl ++vt + l+e+fs yg+v++ +++ +++ g ++gf++ve+++
  MMETSP1325-20131115|14266_1  5 LHVGGLTRNVTQAHLTEIFSTYGAVSNAELVVDRRvGLSKGFGYVEYKN 53
                 79********************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 281.31
//
Query:       MMETSP1325-20131115|14269_1  [L=112]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   14.8   3.6      0.016   14.4   2.5    1.1  1  PF06810.6 Phage minor structural protein GP20
       0.03   13.1   2.2      0.034   12.9   1.5    1.0  1  PF04111.7 Autophagy protein Apg6
      0.042   13.2   0.9      0.051   13.0   0.6    1.1  1  PF03255.9 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
      0.086   12.8   1.3       0.55   10.2   0.2    2.0  2  PF12536.3 Patatin phospholipase
       0.22   10.3   2.4       0.27   10.1   1.6    1.1  1  PF08172.7 CASP C terminal
       0.45    9.9   4.2       0.54    9.7   2.9    1.1  1  PF04156.9 IncA protein


Domain annotation for each model (and alignments):
>> PF06810.6  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   2.5   7.2e-06     0.016      35      80 ..      35      81 ..      25      83 .. 0.90

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 7.2e-06
    PF06810.6 35 qlkerdkqiedLkk.kvkdneeLkkkieklkeknkkkkeeyeaklkd 80
                 +lk+r++++e+L k k++ n  ++++i++l++ + ++ e++ ++l +
  MMETSP1325-20131115|14269_1 35 DLKKRNQELEELAKnKEEYNLRIQDEIQDLQDXVRQAAEDIPQELRQ 81
                 79**********885888899***************99999998876 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.5   1.5e-05     0.034      43     106 ..      14      74 ..      10      95 .. 0.73

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.5e-05
                  XXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF04111.7  43 eekdvYkqylekLesqnkeeenvealdseldeLkkeeerlleeleelekeedkldeeleelqee 106
                  e+ ++   +l+ L++q+ e  + ++ ++el+eL+k++e+      ++++e ++l++ +++  e+
  MMETSP1325-20131115|14269_1  14 EDSKTCVFILKLLNDQRCEVRDLKKRNQELEELAKNKEEYN---LRIQDEIQDLQDXVRQAAED 74 
                  566777778999**********************9988765...45566666666666655443 PP

>> PF03255.9  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.6   2.2e-05     0.051       8      54 ..      32      81 ..      25      90 .. 0.76

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 2.2e-05
    PF03255.9  8 plaelekkieelkklae...kkdvdvseeiekLekkleklkkeiysnLtp 54
                 ++ +l+k+ +el++la+   + +  +++ei+ L++ +++++++i ++L +
  MMETSP1325-20131115|14269_1 32 EVRDLKKRNQELEELAKnkeEYNLRIQDEIQDLQDXVRQAAEDIPQELRQ 81
                 56667666666666655222677899******************999875 PP

>> PF12536.3  Patatin phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.085   1.9e+02      31      70 ..       8      48 ..       3      51 .. 0.75
   2 ?   10.2   0.2   0.00024      0.55       9      41 ..      53      85 ..      49     101 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.0 bits;  conditional E-value: 0.085
    PF12536.3 31 lpeelrk.dpdvrelaelasgtavtivhLiyrskeyeassk 70
                 lp  l + ++ +  + +l +++++++ +L  r++e e+ +k
  MMETSP1325-20131115|14269_1  8 LPGYLHEdSKTCVFILKLLNDQRCEVRDLKKRNQELEELAK 48
                 56666664566778888999999999999999999998777 PP

  == domain 2    score: 10.2 bits;  conditional E-value: 0.00024
    PF12536.3  9 lntdrlkqiqrlrralrelleklpeelrkdpdv 41
                 +n++ + +iq+l+  +r+ +e +p+elr+ p++
  MMETSP1325-20131115|14269_1 53 YNLRIQDEIQDLQDXVRQAAEDIPQELRQPPEI 85
                 6788899**********************8876 PP

>> PF08172.7  CASP C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.6   0.00012      0.27      92     121 ..      36      65 ..      15      70 .. 0.82

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00012
    PF08172.7  92 FkkRnteLEeelrkleqtvsslrqelaklk 121
                  +kkRn+eLEe +++ e+    +++e++ l+
  MMETSP1325-20131115|14269_1  36 LKKRNQELEELAKNKEEYNLRIQDEIQDLQ 65 
                  89*************************998 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.9   0.00023      0.54      93     166 ..      29      74 ..      14      91 .. 0.50

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00023
    PF04156.9  93 leeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqelrse 166
                  +  e+ +l +r++ele+  ++ ee++  +q e                             +dl++ v++  ++
  MMETSP1325-20131115|14269_1  29 QRCEVRDLKKRNQELEELAKNKEEYNLRIQDEI----------------------------QDLQDXVRQAAED 74 
                  233333333333333333333333333333333............................4444444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1254  (0.0917203); expected 273.4 (0.02)
Passed bias filter:                      922  (0.0674371); expected 273.4 (0.02)
Passed Vit filter:                       131  (0.00958163); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.42s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 497.02
//
Query:       MMETSP1325-20131115|14253_1  [L=537]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.3e-136  452.5   0.0   5.3e-136  452.2   0.0    1.1  1  PF00113.17 Enolase, C-terminal TIM barrel domain
    6.9e-55  184.4   0.1    1.4e-54  183.4   0.1    1.6  1  PF03952.11 Enolase, N-terminal domain
    3.1e-06   26.2   0.2      6e-06   25.2   0.1    1.4  1  PF07476.6  Methylaspartate ammonia-lyase C-terminus
     0.0062   16.3   0.0      0.021   14.6   0.0    1.9  2  PF13378.1  Enolase C-terminal domain-like


Domain annotation for each model (and alignments):
>> PF00113.17  Enolase, C-terminal TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  452.2   0.0  1.6e-139  5.3e-136       2     294 ..     172     464 ..     171     466 .. 0.97

  Alignments for each domain:
  == domain 1    score: 452.2 bits;  conditional E-value: 1.6e-139
   PF00113.17   2 vvlPvPalnvinGGshagnklalqefmilPtGassfkealrlGaevyhklksvikkkygksatnvGdeGGfaPnlqsnkealdlikeaiekaGykgkvkialdvassefykekdgkydldfknee.sdkskkltseeladlykelvkkyPivsiedpfdeddweawkklteelgdkiqivGddltvtnpkrlkkaiekkaanalllkvnqiGsvtesleavklakkagygvvvshrsGetedtfiadlavglkaGqiktGapcrserlakynqllrieeelgekakyaGkkfrk 294
                  +++PvP +nvinGG+hagnkla+qef ++PtGa+sf+ea+ +G+ev+h+lk+vik+++g +at +GdeGGfaP  +  +++l++ +eai++aGy +k +++ldvassef  e +++ydldfk +e +d s  lt +el ++y +++kkyPiv+iedpfd+ddw  w+k+t++lg ++qivGddltvtnp ++++ai++kaan+lllkvnqiGs+tes++avkl+k++g+gv+ shrsGeted++iadlavgl++GqiktGapcr er akynqllriee+lg ka yaG+ fr+
  MMETSP1325-20131115|14253_1 172 FTMPVPCFNVINGGEHAGNKLAFQEFFVIPTGAESFSEAMSMGCEVFHNLKAVIKREFGGDATLIGDEGGFAPPCD-VDSGLAMCMEAIDNAGYLDKFTVGLDVASSEFKVEGKNEYDLDFKTKEgKDASLLLTGDELLEFYADMCKKYPIVTIEDPFDQDDWTNWSKITAKLGVDVQIVGDDLTVTNPSKIEEAIKTKAANCLLLKVNQIGSITESINAVKLSKQNGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRGERTAKYNQLLRIEEQLGGKAGYAGAGFRA 464
                  78***********************************************************************986.5689*****************************************97625778899************************************************************************************************************************************************************98875 PP

>> PF03952.11  Enolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.4   0.1   4.2e-58   1.4e-54       1     131 [.      32     160 ..      32     161 .. 0.99

  Alignments for each domain:
  == domain 1    score: 183.4 bits;  conditional E-value: 4.2e-58
                  S--EEE-EEEE-----EEEEEEEE----.-EEEE----------S--------TTTT-----HHHHHHHHHT---------TT-HHHHHHHHHHH---TT------TTT---HHHHHHHHHHH----HHHH CS
   PF03952.11   1 kIekikareildSrGnpTvevevtlesgalgraavPsgaStgekealelrdgdkkrylgkgvekavenvneeiapaligldvedqkeiDkllieldgtenksklGanailavSlAvakaaAaakklplyry 131
                  +I+ +++rei+dSrGnpTvev+vt+++g +++a++PsgaStg++ea elrdg+  ry+gkgv+ av +vn++iapalig+d  dq+ iD+l+ieldgt+nk +lGanail+ SlAv ka+A akk+ply++
  MMETSP1325-20131115|14253_1  32 TITAVHGREIIDSRGNPTVEVDVTTTDG-MFTASCPSGASTGIYEAAELRDGG-GRYMGKGVLAAVGHVNNTIAPALIGKDPVDQEGIDNLMIELDGTPNKGNLGANAILGASLAVSKAGAGAKKVPLYQH 160
                  699*************************.88**********************.***************************************************************************98 PP

>> PF07476.6  Methylaspartate ammonia-lyase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   1.8e-09     6e-06     108     217 ..     322     425 ..     304     431 .. 0.79

  Alignments for each domain:
  == domain 1    score: 25.2 bits;  conditional E-value: 1.8e-09
                  EEEE-----SSHHHHHHHHHHHHHHHHH----EEEEE-TT--S.HHHHHHHHHTT--SEEE--GGG----HHHHHHHHHHHH---EEEE---TTS-HHHHHHHHHHHHHH- CS
    PF07476.6 108 lriegPldagskeeqiealaelreklkergvkvelvaDeWcnt.ledikefvdaeaadlvqiktPDlGginntieavlyckekgvgaylGGscnetdvsarvsvhvalatr 217
                  ++ie+P d+++ ++     +   +  ++ gv+v++v D+ + t  + i+e + ++aa+ + +k+  +G+i+++i+av  +k++g g+++   + et+    +   v+l t+
  MMETSP1325-20131115|14253_1 322 VTIEDPFDQDDWTN----WS---KITAKLGVDVQIVGDDLTVTnPSKIEEAIKTKAANCLLLKVNQIGSITESINAVKLSKQNGWGVMTSHRSGETEDNYIADLAVGLCTG 425
                  45677776655432....33...3345569*********98762579*******************************************999999988777777777765 PP

>> PF13378.1  Enolase C-terminal domain-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.8   6.3e+03      61      72 ..      14      25 ..       6      66 .. 0.49
   2 !   14.6   0.0   6.2e-06     0.021       4      57 ..     356     411 ..     353     454 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 1.8
                 HHHHHHHHTSTT CS
    PF13378.1 61 aaalhlaaalpn 72
                 a++++ aaa+p 
  MMETSP1325-20131115|14253_1 14 AFSAARAAAAPA 25
                 455555555553 PP

  == domain 2    score: 14.6 bits;  conditional E-value: 6.2e-06
                  SSSHHHHHHHHHTT--SEEEEBTTTCH-HHHHHHHHHHHHHTT-EEEEBS.C.SHH CS
    PF13378.1   4 ltsrrdfrrlleagavdiiqpdlakvGGitealriaalaeayglpvaphs.m.esp 57 
                  +t+++ ++++++ +a+ ++ +++ ++G ite++ +++l +++g+ v+      e+ 
  MMETSP1325-20131115|14253_1 356 VTNPSKIEEAIKTKAANCLLLKVNQIGSITESINAVKLSKQNGWGVMTSHrSgETE 411
                  6899999*********99***************************99876344554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       376  (0.0275015); expected 273.4 (0.02)
Passed bias filter:                      318  (0.0232592); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.87u 0.35s 00:00:01.22 Elapsed: 00:00:00.60
# Mc/sec: 2144.74
//
Query:       MMETSP1325-20131115|14272_1  [L=193]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-57  192.5   0.0    5.4e-57  192.2   0.0    1.0  1  PF04062.9 ARP2/3 complex ARPC3 (21 kDa) subunit


Domain annotation for each model (and alignments):
>> PF04062.9  ARP2/3 complex ARPC3 (21 kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.2   0.0     4e-61   5.4e-57      12     175 .]      29     190 ..      22     190 .. 0.95

  Alignments for each domain:
  == domain 1    score: 192.2 bits;  conditional E-value: 4e-61
    PF04062.9  12 eserlvgnlallPlrtkirGPaytedeeeadiidealdlfranvffrnfeikgeadrvliylilyiseclkklkkstskkeaekelanlaldnfaiPGdagfPlnslyekPadreeaellrqyltqlrqelaarllervyeeeedkpskwWlsfakrkfmdksl 175
                  e e+ +g +a+lP++t++rGPa+++ ++e+d++de++++franvffrnfe+kg  dr++iyl+ly++ clk+l++++sk+ea+k+l+++a++ faiPGd+++ l  +  +P++ +e e l++yl+q+r+e++ r++e +y ++ ++ +kwW sf+krkfm+k l
  MMETSP1325-20131115|14272_1  29 EGEEFCG-MAILPITTSVRGPAPQSPADEEDVVDETIKFFRANVFFRNFEVKGGGDRTMIYLTLYLQACLKELERVSSKTEAAKALHQMAIKPFAIPGDSQWVLGGMCPPPKNMAEGEGLKAYLKQCREEVGLRVVELLYYAD-GSKNKWWQSFSKRKFMGKEL 190
                  4445555.9***********************************************************************************************************************************987.5689*************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       264  (0.0193095); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 984.04
//
Query:       MMETSP1325-20131115|14277_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       205  (0.0149941); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 186.92
//
Query:       MMETSP1325-20131115|14275_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.34s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 800.38
//
Query:       MMETSP1325-20131115|14281_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.7    7.4   5.7        3.6    7.0   3.9    1.3  1  PF07219.8 HemY protein N-terminus


Domain annotation for each model (and alignments):
>> PF07219.8  HemY protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   3.9   0.00026       3.6      54      88 ..      13      47 ..       4      63 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.00026
    PF07219.8 54 rkrrrgrkalseGllalaeGdwakAerlarkaael 88
                  +++r r+a+++Gl+++a+ +++ A   ++ a+++
  MMETSP1325-20131115|14281_1 13 VREERLRTATETGLRRAAAKRARHADERVEGAKAQ 47
                 5899*********************9998877544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       608  (0.0444705); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.48
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|14283_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-31  107.4   0.0    8.6e-31  107.0   0.0    1.2  1  PF00454.22 Phosphatidylinositol 3- and 4-kinase
     0.0047   15.8   0.0     0.0062   15.4   0.0    1.2  1  PF13575.1  Domain of unknown function (DUF4135)


Domain annotation for each model (and alignments):
>> PF00454.22  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.0   0.0   1.3e-34   8.6e-31     114     232 ..       7     122 ..       1     125 [. 0.94

  Alignments for each domain:
  == domain 1    score: 107.0 bits;  conditional E-value: 1.3e-34
                  HHHHHHHHHHHHH---HHHHHH-------CCCEEE.E----EEE--------...----SSSS--SS---HHHHHH-------SHHHHHHHHHHHHHHHHHHCTHHHHHHHHHCCCCS--CC CS
   PF00454.22 114 eflearsqfarslaklsvldyilgngDRhldNilvdkktgklvhIDfGlclp...skheekpelvpfrltrpfseemreyldpskdeglfresceeilealrrdqdlltrlLqafveigllk 232
                   + ++r++f   +a+++v++y+lg+gDRh dNi+v +++g+l+hIDfG++l+   sk++ k+e+ pf++t+++ +++      +  + +f+ +c+++++ lr  + ll++l++++v  g+++
  MMETSP1325-20131115|14283_1   7 LYEKSRETFMYTCAGYCVATYVLGIGDRHSDNIMV-TESGHLFHIDFGHFLGnfkSKFGIKRERAPFVFTPEMAYVL-----GTDGYVKFEGICCKAYNMLRAKTSLLISLFLLMVPAGMPE 122
                  56779******************************.*****************************************.....4567889***************************999986 PP

>> PF13575.1  Domain of unknown function (DUF4135)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   9.1e-07    0.0062     134     178 ..      13      58 ..       3      81 .. 0.80

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 9.1e-07
    PF13575.1 134 erfYrrlGallallylLgatDlHfENlia.egeypvliDlEtlfhp 178
                  e f++ +  +    y+Lg+ D H +N+++ e+++ + iD+  ++ +
  MMETSP1325-20131115|14283_1  13 ETFMYTCAGYCVATYVLGIGDRHSDNIMVtESGHLFHIDFGHFLGN 58 
                  55655555555668****************999******9888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       437  (0.0319631); expected 273.4 (0.02)
Passed bias filter:                      356  (0.0260386); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.38s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 833.93
//
Query:       MMETSP1325-20131115|14303_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        94  (0.00687537); expected 273.4 (0.02)
Passed bias filter:                       91  (0.00665594); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 347.71
//
Query:       MMETSP1325-20131115|14304_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       492  (0.035986); expected 273.4 (0.02)
Passed bias filter:                      407  (0.0297689); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.37s 00:00:00.83 Elapsed: 00:00:00.52
# Mc/sec: 755.77
//
Query:       MMETSP1325-20131115|14307_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-10   39.7   0.2    8.4e-09   34.6   0.1    2.0  1  PF00202.16 Aminotransferase class-III


Domain annotation for each model (and alignments):
>> PF00202.16  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.1   6.1e-13   8.4e-09      58     122 ..      37      93 ..      30     142 .. 0.85

  Alignments for each domain:
  == domain 1    score: 34.6 bits;  conditional E-value: 6.1e-13
                  EHHHHHHHHHHHHHS-----EEEEE----HHHHHHHHHHH...SS.HHCT--EEEEETTT----- CS
   PF00202.16  58 tepalklaeklaeltPkgldkvflansGseanetAlKlarayekkkgatektkiiafegafhGrt 122
                  ++ + ++ + l+++t  gld+v + +sG+ea+++A++lar       +t++  +++f ga+hG  
  MMETSP1325-20131115|14307_1  37 HPVINDCITHLRKIT--GLDEVSFHMSGTEAVMAAVRLAR------FNTKRRLVVTFGGAYHGWW 93 
                  5667789999*****..***********************......*****************65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       308  (0.0225278); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.41s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 676.62
//
Query:       MMETSP1325-20131115|14308_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       228  (0.0166764); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 441.68
//
Query:       MMETSP1325-20131115|14313_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       393  (0.0287449); expected 273.4 (0.02)
Passed bias filter:                      352  (0.0257461); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.32s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 817.89
//
Query:       MMETSP1325-20131115|14315_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      110  (0.00804564); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.35s 00:00:00.68 Elapsed: 00:00:00.52
# Mc/sec: 331.80
//
Query:       MMETSP1325-20131115|14316_1  [L=169]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.004   15.3   0.7     0.0046   15.1   0.5    1.0  1  PF05911.6 Plant protein of unknown function (DUF869)
  ------ inclusion threshold ------
       0.03   13.5   0.1      0.039   13.2   0.1    1.1  1  PF03082.9 Male accessory gland secretory protein
      0.049   12.2   0.2      0.063   11.9   0.1    1.2  1  PF07899.6 Frigida-like protein
      0.065   13.1   2.7       0.08   12.8   1.9    1.1  1  PF10146.4 Zinc finger-containing protein
      0.089   11.8   1.3       0.12   11.4   0.9    1.1  1  PF13851.1 Growth-arrest specific micro-tubule binding
       0.12   11.8   1.5       0.26   10.7   1.0    1.6  1  PF14063.1 Protein of unknown function (DUF4254)
       0.13   12.0   0.2        2.3    8.0   0.0    2.1  2  PF06103.6 Bacterial protein of unknown function (DUF948)


Domain annotation for each model (and alignments):
>> PF05911.6  Plant protein of unknown function (DUF869)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.5   2.4e-06    0.0046     239     342 ..      30     144 ..      11     151 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 2.4e-06
    PF05911.6 239 pskassalasslenlqkaskenealtarllaledenktlkealskrnselqvsrnmyAktaskLseleaql.......eenrevslelskssnt.snppsl..esvsedg.ndde 342
                  +s  + +la  +e++ + ++  + ++  + ale e  ++ ea    + elq+   ++A+ +s L+ +e+ +       e+ ++++++l+++s +   + s   e v+edg  +de
  MMETSP1325-20131115|14316_1  30 SSAFEDPLAICTERIRELRQSRKIAVSEMDALEAERTAVIEAIKLCQFELQYKTETVARRISELEAFESAIdemstsfESIMHMTEDLMHRSRKiGREDSDegEQVEEDGgIEDE 144
                  333334444889999999999************************************************9988888855558888888766544144544322678888886665 PP

>> PF03082.9  Male accessory gland secretory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1     2e-05     0.039     144     186 ..      51      94 ..      38     107 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 2e-05
    PF03082.9 144 rnhsvslmkeiearktdiikvrql.nldleleleslkrklleln 186
                  r+ +vs m+ +ea +t +i++ +l +++l+ + e++ r+++el+
  MMETSP1325-20131115|14316_1  51 RKIAVSEMDALEAERTAVIEAIKLcQFELQYKTETVARRISELE 94 
                  6778999************998874689999***********98 PP

>> PF07899.6  Frigida-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   3.2e-05     0.063     245     277 ..      63      95 ..      16     106 .. 0.70

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 3.2e-05
    PF07899.6 245 aaLravikcieehkleseypledlekrieeLek 277
                  a+  avi+ i+ ++ e +y++e++++ri eLe 
  MMETSP1325-20131115|14316_1  63 AERTAVIEAIKLCQFELQYKTETVARRISELEA 95 
                  334589*************************97 PP

>> PF10146.4  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.9   4.1e-05      0.08      28     112 ..      31     115 ..      22     144 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.1e-05
    PF10146.4  28 eaeEkllkeykkeleeLlkEkmsHvEelrqihaDindlEniikqseeekekrlekinrlyeeylrlkeeidekrkeylglekLpe 112
                   a E  l+ + + + eL + ++  v e+  ++a+  ++ + ik  + e++ ++e++ r   e+ ++ ++ide+  ++ ++ ++ e
  MMETSP1325-20131115|14316_1  31 SAFEDPLAICTERIRELRQSRKIAVSEMDALEAERTAVIEAIKLCQFELQYKTETVARRISELEAFESAIDEMSTSFESIMHMTE 115
                  566888899999***************************************************************9988777654 PP

>> PF13851.1  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.9   6.1e-05      0.12      35     125 ..      43     130 ..      38     138 .. 0.78

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 6.1e-05
    PF13851.1  35 eiaelkkkeekneklmaeikkenkrlkepLkkaeeeveeLkkklkqyekdkqsLknlkaklkelekelknlkwesevleqrfekverErde 125
                   i el++  +   ++m+ +     + ++ +++++    eL+ k+++ ++  ++L+ +++ ++e+   ++++++ +e+l  r +k+ rE  +
  MMETSP1325-20131115|14316_1  43 RIRELRQSRKIAVSEMDAL---EAERTAVIEAIKLCQFELQYKTETVARRISELEAFESAIDEMSTSFESIMHMTEDLMHRSRKIGREDSD 130
                  4445555555555555555...55556666777777789**********************************************999765 PP

>> PF14063.1  Protein of unknown function (DUF4254)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.0   0.00013      0.26      38     101 ..      57     120 ..      34     136 .. 0.73

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00013
    PF14063.1  38 aIdklnqeRndlveaiDelllealkdvkpaedarlnsetlgaliDrLsilalkiyhmeeqaere 101
                  ++d+l+ eR+ ++eai  +  e   + ++ +      e  +++iD++s +   i hm e++  +
  MMETSP1325-20131115|14316_1  57 EMDALEAERTAVIEAIKLCQFELQYKTETVARRISELEAFESAIDEMSTSFESIMHMTEDLMHR 120
                  5688888888888888877664333333333334456888999999999999999999887655 PP

>> PF06103.6  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.044        86      25      72 ..      41      88 ..      26      96 .. 0.86
   2 ?    8.0   0.0    0.0012       2.3      28      59 ..      93     124 ..      81     127 .. 0.84

  Alignments for each domain:
  == domain 1    score: 2.9 bits;  conditional E-value: 0.044
    PF06103.6 25 kktldevnktvkkltkqvdgitketeellaktnelleDvneKvetldp 72
                 ++ ++e++++ k   +++d +  e + +++  +  + +++ K+et+  
  MMETSP1325-20131115|14316_1 41 TERIRELRQSRKIAVSEMDALEAERTAVIEAIKLCQFELQYKTETVAR 88
                 566899999999999**************9999999999999999865 PP

  == domain 2    score: 8.0 bits;  conditional E-value: 0.0012
    PF06103.6  28 ldevnktvkkltkqvdgitketeellaktnel 59 
                  l+  +++++++ +  + i++ te+l+++++++
  MMETSP1325-20131115|14316_1  93 LEAFESAIDEMSTSFESIMHMTEDLMHRSRKI 124
                  7778899********************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       641  (0.0468841); expected 273.4 (0.02)
Passed bias filter:                      464  (0.033938); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         7  (0.000511995); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.42s 00:00:00.93 Elapsed: 00:00:00.57
# Mc/sec: 698.25
//
Query:       MMETSP1325-20131115|14319_1  [L=314]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-22   77.8  10.1    1.3e-21   77.1   7.0    1.3  1  PF00487.19 Fatty acid desaturase
    6.2e-09   34.8   0.1    1.2e-08   33.9   0.1    1.5  1  PF08557.5  Sphingolipid Delta4-desaturase (DES)


Domain annotation for each model (and alignments):
>> PF00487.19  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   7.0   1.8e-25   1.3e-21       5     247 ..      58     272 ..      54     281 .. 0.85

  Alignments for each domain:
  == domain 1    score: 77.1 bits;  conditional E-value: 1.8e-25
   PF00487.19   5 llllalllaalllsilvnlaHealHgalfrsrrlnrvlglllalllgissla.wrrsHlrhHhytgnaekDpdsalrrlirlaerrpllklrrllyrlllglllggllfllalerrklrkrrrrkglalllallilalllalaglllllsglgalllyvvplalaltvlllvnyleHygletednnaardfyenqlltssnsegswvlnllsgnlnyHieHHlfPgvpwyrLpelhprlreelk 247
                  l ++a+l+++++   l   +He +H++ f++  +nrvl+ +++l+lgi+    +r+ Hl hH+y g++  D d + +                + +++++++   +l+ ll   +++lr   +  +  l   ++ +a+ +++ +l+  + gl +l+++v+ ++l+ ++        H+  e    ++  +  + ++        + +ln  + n +yH+eHH fP++p +rL ++ +++ e+++
  MMETSP1325-20131115|14319_1  58 LIPFAYLIGGAANCNLQLAMHEISHNLAFKGMFANRVLSIIANLPLGIPAAIsFRKYHLEHHRYQGHDVVDVDVPCE----------------WEGWFFVSAPRKFLWCLLQPAFYALRPVFTNPKPMLKMEAANIAVQITFDFLIYRTCGLKGLMYLVAGTLLGMGIHPTAY---HFISE----HCVFVEGYETYS------YYGWLNAIMYNVGYHNEHHDFPNIPGSRLYKVKAAAPEFYD 272
                  67899***********************************************************************9................666666666666666666666666666666666689999*****************************************...99543....333333333333......56789***************************999999876 PP

>> PF08557.5  Sphingolipid Delta4-desaturase (DES)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.1   1.7e-12   1.2e-08      12      37 ..       5      30 ..       3      32 .. 0.92

  Alignments for each domain:
  == domain 1    score: 33.9 bits;  conditional E-value: 1.7e-12
    PF08557.5 12 eePHasRRkeILkkYPeikkLmGpdp 37
                 +ePH  R  eILk++Peik+LmGp p
  MMETSP1325-20131115|14319_1  5 PEPHCGRKAEILKAHPEIKRLMGPCP 30
                 79*********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      238  (0.0174078); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.53
# Mc/sec: 1419.73
//
Query:       MMETSP1325-20131115|14326_1  [L=122]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.36s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 622.03
//
Query:       MMETSP1325-20131115|14321_1  [L=139]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0056   16.6   0.4     0.0079   16.1   0.3    1.2  1  PF12445.3  Flagellin protein
  ------ inclusion threshold ------
      0.065   12.0   1.6        1.7    7.3   0.2    2.0  2  PF00913.14 Trypanosome variant surface glycoprotein (A-type)


Domain annotation for each model (and alignments):
>> PF12445.3  Flagellin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.3   1.2e-06    0.0079       6     101 ..      12     135 ..       7     138 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.2e-06
    PF12445.3   6 asaaakaatittds......gttyklagatagtvdvtgatvsadallsavksaaftattgtitynvgvlsgkvtftagk.........................aavYvdadgeLTttasytvtYfv 101
                  ++aaa++a+++t+s      g ty +a     ++d+++  +   +++ +  +++ t t ++++y + + +++v+f+ +                          a  ++d  g++T++asy  +Y +
  MMETSP1325-20131115|14321_1  12 GTAAAATASVQTESacpmvdGDTYVFADM--HDGDMKQVAIADGVMTITPYGNNQTWT-TSAKYCSMMCTADVDFNVEGkpspppcnltatvyeltnpaaegmtAIGFTDPTGTITDDASYPLNYWI 135
                  56788999999999888888999999988..88********99999999999988886.5567888889******99879***********************9999**************999975 PP

>> PF00913.14  Trypanosome variant surface glycoprotein (A-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.2   0.00025       1.7     187     243 ..      12      70 ..       4      72 .. 0.84
   2 ?    4.0   0.0    0.0025        17     159     191 ..      93     126 ..      85     131 .. 0.87

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.00025
   PF00913.14 187 egtgdtdqgtggskkCrLtsgatgggllksgn.ltanvkwagGlltvk..gstatitlaa 243
                  +++++ ++  ++++ C+++ ++++  +++ ++   + v +a+G  t++  g+++t+t++a
  MMETSP1325-20131115|14321_1  12 GTAAAATASVQTESACPMV-DGDTYVFADMHDgDMKQVAIADGVMTITpyGNNQTWTTSA 70 
                  4588889999999******.88888888888878889999**********9999999986 PP

  == domain 2    score: 4.0 bits;  conditional E-value: 0.0025
   PF00913.14 159 ecklttsevtttsattevitatGfkklteg.tgd 191
                  +c lt++  + t++++e++ta Gf+  t++ t+d
  MMETSP1325-20131115|14321_1  93 PCNLTATVYELTNPAAEGMTAIGFTDPTGTiTDD 126
                  8************************999764444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       353  (0.0258192); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 693.95
//
Query:       MMETSP1325-20131115|14330_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       214  (0.0156524); expected 273.4 (0.02)
Passed bias filter:                      210  (0.0153599); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.51
# Mc/sec: 432.28
//
Query:       MMETSP1325-20131115|14331_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0013   18.8   0.2     0.0013   18.8   0.1    1.3  1  PF00264.15 Common central domain of tyrosinase


Domain annotation for each model (and alignments):
>> PF00264.15  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   9.5e-08    0.0013     196     218 ..      83     105 ..      13     109 .] 0.82

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 9.5e-08
                  -TTGGGGSTHHHHHHHHHHHHHH CS
   PF00264.15 196 dvavaafDPiFflHHaniDrlwa 218
                    a+++ DP F+  H  iDrl++
  MMETSP1325-20131115|14331_1  83 LEAASPVDPTFWPIHPTIDRLFQ 105
                  55789****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 533.07
//
Query:       MMETSP1325-20131115|14336_1  [L=172]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       745  (0.0544909); expected 273.4 (0.02)
Passed bias filter:                      574  (0.0419836); expected 273.4 (0.02)
Passed Vit filter:                        59  (0.00431539); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.43s 00:00:00.94 Elapsed: 00:00:00.54
# Mc/sec: 763.28
//
Query:       MMETSP1325-20131115|14343_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       174  (0.0127267); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 304.54
//
Query:       MMETSP1325-20131115|14342_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       204  (0.014921); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 369.04
//
Query:       MMETSP1325-20131115|14344_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|14350_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       307  (0.0224547); expected 273.4 (0.02)
Passed bias filter:                      294  (0.0215038); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|14354_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      266  (0.0194558); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|14356_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-12   45.5   0.1    5.1e-12   45.3   0.1    1.0  1  PF00069.20 Protein kinase domain
    3.5e-09   36.0   0.1    3.7e-09   35.9   0.1    1.0  1  PF07714.12 Protein tyrosine kinase
  ------ inclusion threshold ------
      0.083   12.1   0.1      0.087   12.0   0.0    1.1  1  PF07094.6  Protein of unknown function (DUF1357)


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.1   1.1e-15   5.1e-12      23      91 ..       4      73 ..       1      78 [. 0.90

  Alignments for each domain:
  == domain 1    score: 45.3 bits;  conditional E-value: 1.1e-15
                 CCEEEEEEEEEGGGHHHHHHHHHHH.HHHHHHHHH-TTB--EEEEEEESTEEEEEEE--SC-EHHHHHHH CS
   PF00069.20 23 tgkkvAvKilkkeeekskkektavr.ElkilkklsHpnivkllevfeekdelylvleyveggdlfdllkk 91
                 +++ +A+K+l+k+e  + k++ +v  E +++ +++Hp+i+ l+++++++ +lyl+ley++gg+lf++l++
  MMETSP1325-20131115|14356_1  4 SKEVFALKVLHKKEVVEYKQQDNVMnEKNVMLRCHHPFILALHNTYRDEHRLYLLLEYCNGGELFTVLHT 73
                 5678*********9999888887777****************************************9984 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.1   8.2e-13   3.7e-09      30      97 ..       7      76 ..       1      80 [. 0.87

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 8.2e-13
                 EEEEEEE..CTTSBHHHHHHHHHHHHHHHHT-BTTB--BEEEBESSSSEEEEEE---B--HHHHHHHTGT CS
   PF07714.12 30 kVavKtl..kesaeeeekeefleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlefLrkkek 97
                   a+K+l  ke  e ++++++++e ++m +++hp i+ l+  + +e++l++++ey++gG+L ++L+++++
  MMETSP1325-20131115|14356_1  7 VFALKVLhkKEVVEYKQQDNVMNEKNVMLRCHHPFILALHNTYRDEHRLYLLLEYCNGGELFTVLHTRDR 76
                 4589999644456777899***********************************************9854 PP

>> PF07094.6  Protein of unknown function (DUF1357)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.9e-05     0.087     176     214 ..      15      54 ..       2      64 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 1.9e-05
    PF07094.6 176 rnnivkseekaslrd.snfvpinftelrkamlneyeelki 214
                  ++++v+++++ ++ + +n++   ++ +  a+ n+y++ ++
  MMETSP1325-20131115|14356_1  15 KKEVVEYKQQDNVMNeKNVMLRCHHPFILALHNTYRDEHR 54 
                  3458999999887653899****************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       507  (0.0370831); expected 273.4 (0.02)
Passed bias filter:                      444  (0.0324751); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 396.13
//
Query:       MMETSP1325-20131115|14355_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-15   55.1   2.5    5.6e-15   54.9   1.8    1.1  1  PF02297.12 Cytochrome oxidase c subunit VIb


Domain annotation for each model (and alignments):
>> PF02297.12  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   1.8   4.1e-19   5.6e-15       1      56 [.      15      70 ..      15      76 .. 0.94

  Alignments for each domain:
  == domain 1    score: 54.9 bits;  conditional E-value: 4.1e-19
   PF02297.12  1 arfPnknerkaCweardeYfkCldkkgedaneCkaerkeyesnCpkswveyfkekr 56
                 +rfP++n+  +Cw+++ e+  Cl+ ++ d+ +Ck  r+   s+Cp +w e+++e+r
  MMETSP1325-20131115|14355_1 15 KRFPSQNQAAHCWNRYNEWVLCLKGTDGDEDACKGVRQMAASICPVEWTEKWDEER 70
                 59****************************************************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 363.73
//
Query:       MMETSP1325-20131115|14357_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       122  (0.00892335); expected 273.4 (0.02)
Passed bias filter:                      115  (0.00841135); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 320.94
//
Query:       MMETSP1325-20131115|14363_1  [L=110]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       377  (0.0275746); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.60
# Mc/sec: 439.33
//
Query:       MMETSP1325-20131115|14376_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      123  (0.00899649); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.42s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 295.27
//
Query:       MMETSP1325-20131115|14373_1  [L=356]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-07   28.8   2.0    5.9e-07   28.6   0.3    1.9  2  PF02825.15 WWE domain


Domain annotation for each model (and alignments):
>> PF02825.15  WWE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.3   4.3e-11   5.9e-07      37      72 .]       8      43 ..       3      43 .. 0.92
   2 ?   -2.1   0.0      0.17   2.3e+03      14      29 ..      71      86 ..      70      86 .. 0.85

  Alignments for each domain:
  == domain 1    score: 28.6 bits;  conditional E-value: 4.3e-11
   PF02825.15 37 kertlevdifgrpytidfksmtqlreetgttreVrR 72
                 + + + +++ g++ytid++ mtq++  t++tr++rR
  MMETSP1325-20131115|14373_1  8 DATSCTLNTNGFTYTIDLERMTQTNSTTNRTRKIRR 43
                 567899*****************************9 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.17
   PF02825.15 14 dsngkWrpYspavseh 29
                 d+ ++W  Y+ + ++h
  MMETSP1325-20131115|14373_1 71 DEVKEWKGYPSRQCCH 86
                 56689******99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      267  (0.019529); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.55
# Mc/sec: 1551.10
//
Query:       MMETSP1325-20131115|14371_1  [L=317]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.53   10.2  11.5       0.81    9.6   8.0    1.3  1  PF09805.4 Nucleolar protein 12 (25kDa)
        1.7    8.6  10.3       0.15   11.9   2.5    2.5  3  PF12870.2 Lumazine-binding domain


Domain annotation for each model (and alignments):
>> PF09805.4  Nucleolar protein 12 (25kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   8.0   0.00012      0.81      38     119 ..     149     233 ..     146     270 .. 0.65

  Alignments for each domain:
  == domain 1    score: 9.6 bits;  conditional E-value: 0.00012
    PF09805.4  38 AqeeakekereerieerkkiReerkkelekq..lkefkealkeleeeeddeeeeeeekeeeeeedewegfn.edeeeeeteeeed 119
                  A ee +ek+r+e ++ r  + ee k+++e++  l+ +k+a+ e +++ ++ +  eee +  eee +    + ++e+++  +e + 
  MMETSP1325-20131115|14371_1 149 AVEEREEKKRQEEVASRAAMLEEHKAKMEQEaaLAARKAAVAEHAAKVAGGSAPEEEPKVVEEEPKVAAEEqKEEPKVAADEPKA 233
                  899*********************9999875226777777777777766666555555544444422222212222222222222 PP

>> PF12870.2  Lumazine-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.5   2.2e-05      0.15       2      83 ..     113     196 ..     112     205 .. 0.82
   2 ?   -0.6   0.2      0.17   1.2e+03      54      83 ..     232     263 ..     201     275 .. 0.49
   3 ?   -1.6   0.0      0.35   2.4e+03       6      31 ..     279     304 ..     276     313 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.2e-05
    PF12870.2   2 aC..eskstPeevvknfyealkeGdvkdfvkllteetkd.kdkake.kfegkvkmmveeakkkiekkggvkiveveekeigdsAtV 83 
                  aC  + k+ P+ vv     + +eG ++++v+++++ + +  ++ k+ + +++  +m ee k+k e++  ++ +++     ++ A+V
  MMETSP1325-20131115|14371_1 113 ACadKRKEMPKPVVGHACTDGYEGGYAAAVDFFSDGAVEeREEKKRqEEVASRAAMLEEHKAKMEQEAALAARKAAVA--EHAAKV 196
                  676566888****************************99544444467888999999999999999999888877766..566665 PP

  == domain 2    score: -0.6 bits;  conditional E-value: 0.17
    PF12870.2  54 veeakkkiekkggv..kiveveekeigdsAtV 83 
                   +e+ +  e++gg+  ++ ev+e+  + +At 
  MMETSP1325-20131115|14371_1 232 KAEEAAPVEEEGGLrgAVEEVVEEVRKVIATL 263
                  33333333333333112334444333444444 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.35
    PF12870.2   6 kstPeevvknfyealkeGdvkdfvkl 31 
                   +++ e+v+ f +  ++  ++++++ 
  MMETSP1325-20131115|14371_1 279 GQEAAEAVEDFCKKHMSAAGEACIDQ 304
                  56778888888888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1113  (0.0814073); expected 273.4 (0.02)
Passed bias filter:                      500  (0.0365711); expected 273.4 (0.02)
Passed Vit filter:                        51  (0.00373025); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.40s 00:00:01.12 Elapsed: 00:00:00.57
# Mc/sec: 1309.73
//
Query:       MMETSP1325-20131115|14381_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        80  (0.00585138); expected 273.4 (0.02)
Passed bias filter:                       74  (0.00541252); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 321.11
//
Query:       MMETSP1325-20131115|14382_1  [L=136]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-28   97.0   0.0    8.2e-28   96.8   0.0    1.0  1  PF10436.4 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase


Domain annotation for each model (and alignments):
>> PF10436.4  Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.8   0.0     6e-32   8.2e-28      55     163 ..       2     108 ..       1     109 [. 0.91

  Alignments for each domain:
  == domain 1    score: 96.8 bits;  conditional E-value: 6e-32
                  HHHHHHHHHHHHHHHHGG.GSS-TT-HHHHHHHHHHHHHHCTTHHHHHH---HHHHHHS..--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SS----.TT-----E CS
    PF10436.4  55 iskvrewYlqsfeellkfpepktlednekftkvlekikerHdnvvptlaqGvlelkekl..kdsvveseiqkfLDrfymsRIgiRmLigqhialsesetspakpdyvGiId 163
                  +++vr++Y+ sfee++  p+p++   +++f+++le+i +rH++v+ t+a+   el+  +  ++ ++ + i++fLD+fymsRIgiRmLigq++al    ++++++ yvG + 
  MMETSP1325-20131115|14382_1   2 TKEVRAMYATSFEEIRAAPTPNSRVREDNFAELLERIYTRHSAVLLTMARSAYELRADMgnMSFIETDAIHRFLDSFYMSRIGIRMLIGQYLAL----REEKEEGYVGLVS 108
                  579*****************************************************9997444455669*************************....55666899**986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      246  (0.017993); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.32s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 740.69
//
Query:       MMETSP1325-20131115|14387_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      247  (0.0180661); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 273.18
//
Query:       MMETSP1325-20131115|14389_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.2   0.0      0.028   14.1   0.0    1.1  1  PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
       0.07   12.5   0.0      0.095   12.1   0.0    1.2  1  PF02037.22 SAP domain


Domain annotation for each model (and alignments):
>> PF13893.1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   4.1e-06     0.028       7      47 ..      10      48 ..       8      53 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 4.1e-06
    PF13893.1  7 kfGkverikifrkkggqAfvefdtveaArkakeylngvkly 47
                 ++G+v+  k++ +   +A+v    + aA  a+++lng + +
  MMETSP1325-20131115|14389_1 10 MQGEVIGLKVNGT--KEALVDIVGRHAAAAALTNLNGYDVD 48
                 689******9975..6*********************9876 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.4e-05     0.095      16      29 ..      15      28 ..      13      28 .. 0.92

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 1.4e-05
                 TT------HHHHHH CS
   PF02037.22 16 rGLptsGkKaeLie 29
                  GL+++G+K+ L++
  MMETSP1325-20131115|14389_1 15 IGLKVNGTKEALVD 28
                 69**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 282.77
//
Query:       MMETSP1325-20131115|14390_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       169  (0.012361); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|14391_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 739.93
//
Query:       MMETSP1325-20131115|14388_1  [L=315]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.51
# Mc/sec: 1480.10
//
Query:       MMETSP1325-20131115|14397_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|14400_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.24   11.2   4.6       0.55   10.0   3.2    1.7  1  PF08093.6  Magi 5 toxic peptide family
       0.27   11.1   0.4       0.27   11.1   0.3    2.3  3  PF00008.22 EGF-like domain
        3.3    7.2   9.7        1.6    8.2   5.2    1.7  1  PF02977.10 Carboxypeptidase A inhibitor
        4.8    7.1  10.3       0.41   10.5   3.2    2.1  2  PF12947.2  EGF domain
        5.6    6.9  10.3        9.8    6.1   7.1    1.6  1  PF00095.16 WAP-type (Whey Acidic Protein) 'four-disulfide core'


Domain annotation for each model (and alignments):
>> PF08093.6  Magi 5 toxic peptide family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.2    0.0002      0.55       9      23 ..      36      49 ..      33      58 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 0.0002
    PF08093.6  9 CssdkdCCGltPvCk 23
                 Cssd++C G t  C 
  MMETSP1325-20131115|14400_1 36 CSSDAECSGVT-DCV 49
                 ***********.886 PP

>> PF00008.22  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       3.6   9.9e+03      11      13 ..      11      13 ..       9      15 .. 0.56
   2 ?   11.1   0.3    0.0001      0.27       1      12 [.      27      42 ..      27      47 .. 0.95
   3 ?    1.9   0.3     0.076   2.1e+02       6      16 ..      51      61 ..      46      62 .. 0.83

  Alignments for each domain:
  == domain 1    score: -3.5 bits;  conditional E-value: 3.6
                 EEE CS
   PF00008.22 11 tCv 13
                  C+
  MMETSP1325-20131115|14400_1 11 SCN 13
                 554 PP

  == domain 2    score: 11.1 bits;  conditional E-value: 0.0001
                 TTTT....TCSS--EE CS
   PF00008.22  1 Cspn....pCsngGtC 12
                 C++n    pCs +++C
  MMETSP1325-20131115|14400_1 27 CADNthgpPCSSDAEC 42
                 99************** PP

  == domain 3    score: 1.9 bits;  conditional E-value: 0.076
                 CSS--EEEEEC CS
   PF00008.22  6 CsngGtCvdtp 16
                 C + G C+++p
  MMETSP1325-20131115|14400_1 51 CAGSGYCTNVP 61
                 88889999987 PP

>> PF02977.10  Carboxypeptidase A inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   5.2   0.00057       1.6      11      27 ..      35      57 ..      21      61 .. 0.80

  Alignments for each domain:
  == domain 1    score: 8.2 bits;  conditional E-value: 0.00057
   PF02977.10 11 yCntnsDCsgitlC......qwC 27
                 +C++++ Csg+t C      ++C
  MMETSP1325-20131115|14400_1 35 PCSSDAECSGVTDCvrcagsGYC 57
                 9*************665555556 PP

>> PF12947.2  EGF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       0.9   2.4e+03      12      15 ..      10      13 ..       7      17 .. 0.64
   2 ?   10.5   3.2   0.00015      0.41       1      24 [.      27      52 ..      27      56 .. 0.92

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 0.9
    PF12947.2 12 AtCt 15
                 A+C+
  MMETSP1325-20131115|14400_1 10 ASCN 13
                 6665 PP

  == domain 2    score: 10.5 bits;  conditional E-value: 0.00015
    PF12947.2  1 Cavnng..gCdpnAtCtntegsvtCt 24
                 Ca+n++   C+ +A+C+ + + v C+
  MMETSP1325-20131115|14400_1 27 CADNTHgpPCSSDAECSGVTDCVRCA 52
                 9****9777**********9999995 PP

>> PF00095.16  WAP-type (Whey Acidic Protein) 'four-disulfide core'
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   7.1    0.0036       9.8      14      36 ..      26      51 ..       9      60 .. 0.68

  Alignments for each domain:
  == domain 1    score: 6.1 bits;  conditional E-value: 0.0036
   PF00095.16 14 eca.....deCksDsdCpgeqKCCangc 36
                  ca     + C+sD +C+g   C   +c
  MMETSP1325-20131115|14400_1 26 ICAdnthgPPCSSDAECSGVTDCV--RC 51
                 455777779*************96..22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 300.72
//
Query:       MMETSP1325-20131115|14402_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      198  (0.0144822); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 554.16
//
Query:       MMETSP1325-20131115|14405_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00029   19.5   0.0    0.00038   19.1   0.0    1.2  1  PF00225.18 Kinesin motor domain
  ------ inclusion threshold ------
      0.059   13.1   0.1      0.067   12.9   0.1    1.1  1  PF08777.6  RNA binding motif
       0.14   11.5   0.4       0.17   11.2   0.3    1.2  1  PF04977.10 Septum formation initiator


Domain annotation for each model (and alignments):
>> PF00225.18  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   8.4e-08   0.00038     306     335 .]       2      31 ..       1      31 [. 0.97

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 8.4e-08
                  EEEEEEE--BGGGHHHHHHHHHHHHHHCTT CS
   PF00225.18 306 tlmivtvspsssnleetlstLrfaerakni 335
                  tlm+v++sp++ n  et  +L++a+rak+i
  MMETSP1325-20131115|14405_1   2 TLMFVNLSPADYNSGETAGSLTYASRAKEI 31 
                  89**************************98 PP

>> PF08777.6  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.5e-05     0.067      32      82 ..      12      62 ..       5      68 .. 0.81

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 1.5e-05
                 ----------EEESS-..HHHH---TTTT----B..-TTSSS-EEE-----HH CS
    PF08777.6 32 dfkegdkegevrFkedeaakkalekateanegkl..kikeaevtlellegeeE 82
                 d+++g++ g++ +++   ak++ + at+ +e +   k+k ++ +l+ l ge  
  MMETSP1325-20131115|14405_1 12 DYNSGETAGSLTYASR--AKEITNVATKNDESQAvrKLKREIKRLKALAGEDA 62
                 9**************9..***99999998444322267778888888888865 PP

>> PF04977.10  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   3.8e-05      0.17      15      55 ..      20      61 ..      18      70 .. 0.79

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 3.8e-05
   PF04977.10 15 gllalyqlkqeiaalqaelaklkaeneeLeaevkdLks..ded 55
                 g l++ +  +ei+ + +++++ +a  ++L++e+k+Lk   +ed
  MMETSP1325-20131115|14405_1 20 GSLTYASRAKEITNVATKNDESQA-VRKLKREIKRLKAlaGED 61
                 567999999**********99776.568********6455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       823  (0.060196); expected 273.4 (0.02)
Passed bias filter:                      681  (0.0498098); expected 273.4 (0.02)
Passed Vit filter:                        61  (0.00446167); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.43s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 352.41
//
Query:       MMETSP1325-20131115|14408_1  [L=229]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.1e-16   56.5   1.6      0.005   16.6   0.0    4.9  6  PF13516.1 Leucine Rich repeat
    1.3e-13   50.0   0.0    1.4e-05   24.5   0.1    3.2  4  PF12799.2 Leucine Rich repeats (2 copies)
      1e-05   25.0   1.1      0.019   14.5   0.0    2.3  4  PF13855.1 Leucine rich repeat


Domain annotation for each model (and alignments):
>> PF13516.1  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.2     1e+04      14      23 ..      77      86 ..      76      86 .. 0.80
   2 !    8.1   0.0   0.00061       2.8       1      23 [.      89     111 ..      89     112 .. 0.94
   3 !   11.8   0.0     4e-05      0.18       1      24 []     114     137 ..     114     137 .. 0.96
   4 !   15.2   0.1     3e-06     0.014       1      23 [.     139     161 ..     139     162 .. 0.95
   5 !   16.6   0.0   1.1e-06     0.005       1      23 [.     164     186 ..     164     187 .. 0.97
   6 ?   -3.4   0.0         3   1.4e+04      11      19 ..     215     223 ..     210     224 .. 0.80

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 2.2
    PF13516.1 14 igdeGlsaLa 23
                  +d G+ aLa
  MMETSP1325-20131115|14408_1 77 MTDVGATALA 86
                 5899999997 PP

  == domain 2    score: 8.1 bits;  conditional E-value: 0.00061
    PF13516.1   1 lknLtsLdLsnNqigdeGlsaLa 23 
                  ++nL+   L n+q++d  ++aLa
  MMETSP1325-20131115|14408_1  89 CSNLSMVSLDNTQVTDVSAQALA 111
                  8999999***************9 PP

  == domain 3    score: 11.8 bits;  conditional E-value: 4e-05
    PF13516.1   1 lknLtsLdLsnNqigdeGlsaLan 24 
                  ++ Lt+  + n+q++d G++aLan
  MMETSP1325-20131115|14408_1 114 CPDLTVVTFHNTQVSDVGAQALAN 137
                  899*******************97 PP

  == domain 4    score: 15.2 bits;  conditional E-value: 3e-06
    PF13516.1   1 lknLtsLdLsnNqigdeGlsaLa 23 
                  ++nLt + L+++q++d G+saL 
  MMETSP1325-20131115|14408_1 139 CPNLTRIGLNGTQVSDLGASALV 161
                  9********************95 PP

  == domain 5    score: 16.6 bits;  conditional E-value: 1.1e-06
    PF13516.1   1 lknLtsLdLsnNqigdeGlsaLa 23 
                  ++nL +L L n+q++d  ++aLa
  MMETSP1325-20131115|14408_1 164 CPNLVELSLRNTQVTDATAQALA 186
                  9********************98 PP

  == domain 6    score: -3.4 bits;  conditional E-value: 3
    PF13516.1  11 nNqigdeGl 19 
                  +N + d+Gl
  MMETSP1325-20131115|14408_1 215 GNEVEDIGL 223
                  688889886 PP

>> PF12799.2  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00029       1.3      16      41 ..      80     107 ..      76     112 .. 0.74
   2 !   13.1   0.0   1.1e-05      0.05       2      43 ..      91     136 ..      90     138 .. 0.85
   3 !   18.9   0.0   1.7e-07   0.00078       3      42 ..     117     160 ..     115     162 .. 0.88
   4 !   24.5   0.1     3e-09   1.4e-05       1      40 [.     140     181 ..     140     187 .. 0.90

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00029
    PF12799.2  16 lppe.l.anLpnLktLnLsnNpisdlsa 41 
                  ++++ l + ++nL + +L+n++++d+sa
  MMETSP1325-20131115|14408_1  80 VGATaLaGFCSNLSMVSLDNTQVTDVSA 107
                  555446245799************9985 PP

  == domain 2    score: 13.1 bits;  conditional E-value: 1.1e-05
    PF12799.2   2 nLevLdLsnNnIkdlppe.la.nLpnLktLnLsnNpisdl..saLa 43 
                  nL +++L n++++d++++ la ++p+L++    n+++sd+   aLa
  MMETSP1325-20131115|14408_1  91 NLSMVSLDNTQVTDVSAQaLAhSCPDLTVVTFHNTQVSDVgaQALA 136
                  8999************9777459***************97445565 PP

  == domain 3    score: 18.9 bits;  conditional E-value: 1.7e-07
    PF12799.2   3 LevLdLsnNnIkdlppe.lanL.pnLktLnLsnNpisdl..saL 42 
                  L+v+ + n++++d++++ lanL pnL+ + L+++++sdl  saL
  MMETSP1325-20131115|14408_1 117 LTVVTFHNTQVSDVGAQaLANLcPNLTRIGLNGTQVSDLgaSAL 160
                  889999*********988***779**************855666 PP

  == domain 4    score: 24.5 bits;  conditional E-value: 3e-09
    PF12799.2   1 tnLevLdLsnNnIkdlppe..lanLpnLktLnLsnNpisdls 40 
                  +nL+ + L++++++dl+++  + ++pnL +L+L n++++d +
  MMETSP1325-20131115|14408_1 140 PNLTRIGLNGTQVSDLGASalVNSCPNLVELSLRNTQVTDAT 181
                  7****************988679****************964 PP

>> PF13855.1  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0015       6.9      16      59 ..      80     125 ..      75     127 .. 0.71
   2 !    7.8   0.0   0.00054       2.4       1      48 [.      90     138 ..      90     139 .. 0.88
   3 !   14.5   0.0   4.2e-06     0.019       3      60 ..     117     176 ..     115     177 .. 0.86
   4 !   12.3   0.0   2.1e-05     0.096       1      45 [.     140     185 ..     140     187 .. 0.87

  Alignments for each domain:
  == domain 1    score: 6.3 bits;  conditional E-value: 0.0015
    PF13855.1  16 ipdgaFk.glsnLkvLdLsgnnlksispea.fkgLpsLreLnLsgN 59 
                  ++ +a+   +snL   +L ++  + +s++a  +++p L+ + ++++
  MMETSP1325-20131115|14408_1  80 VGATALAgFCSNLSMVSLDNTQVTDVSAQAlAHSCPDLTVVTFHNT 125
                  5555555146999999999999999999973456777777777665 PP

  == domain 2    score: 7.8 bits;  conditional E-value: 0.00054
    PF13855.1   1 pnLkeLdLsnNrlkvipdgaFk.glsnLkvLdLsgnnlksispeafkgL 48 
                  +nL+ + L+n+  ++++  a+  +++ L+v  ++++  + + ++a+++L
  MMETSP1325-20131115|14408_1  90 SNLSMVSLDNTQVTDVSAQALAhSCPDLTVVTFHNTQVSDVGAQALANL 138
                  699*************776665499*********9999*9999999987 PP

  == domain 3    score: 14.5 bits;  conditional E-value: 4.2e-06
    PF13855.1   3 LkeLdLsnNrlkvipdgaFkgl.snLkvLdLsgnnlksispea.fkgLpsLreLnLsgNr 60 
                  L+++   n+  ++++  a+ +l +nL+ + L+g+  + + + a  +++p+L eL+L++++
  MMETSP1325-20131115|14408_1 117 LTVVTFHNTQVSDVGAQALANLcPNLTRIGLNGTQVSDLGASAlVNSCPNLVELSLRNTQ 176
                  77777888899999999999999**************9988754899*********9975 PP

  == domain 4    score: 12.3 bits;  conditional E-value: 2.1e-05
    PF13855.1   1 pnLkeLdLsnNrlkvipdgaFk.glsnLkvLdLsgnnlksispeaf 45 
                  pnL+++ L+++  ++++ +a+  +++nL +L+L ++  +   ++a+
  MMETSP1325-20131115|14408_1 140 PNLTRIGLNGTQVSDLGASALVnSCPNLVELSLRNTQVTDATAQAL 185
                  89**************998887478*********999888877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 1097.53
//
Query:       MMETSP1325-20131115|14401_1  [L=209]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       545  (0.0398625); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.36s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 1001.68
//
Query:       MMETSP1325-20131115|14417_1  [L=185]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.019   15.0   0.3        0.1   12.6   0.0    2.1  2  PF13720.1 Udp N-acetylglucosamine O-acyltransferase; Domain 2


Domain annotation for each model (and alignments):
>> PF13720.1  Udp N-acetylglucosamine O-acyltransferase; Domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   7.6e-06       0.1      22      44 ..      16      38 ..       9      50 .. 0.88
   2 ?    0.2   0.0     0.057   7.8e+02      25      47 ..      71      93 ..      54     133 .. 0.62

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7.6e-06
    PF13720.1 22 glkRrgfskeeikalkkayklly 44
                  l+ r++s+eei++l+ka++++ 
  MMETSP1325-20131115|14417_1 16 RLRNRKMSNEEIEHLRKAHRMIS 38
                 499*****************996 PP

  == domain 2    score: 0.2 bits;  conditional E-value: 0.057
    PF13720.1 25 Rrgfskeeikalkkaykllyrsg 47
                 +  f+  + +a+k+a k+l + g
  MMETSP1325-20131115|14417_1 71 HGSFEGLTRSAVKHACKKLEQAG 93
                 45555555556666666555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       569  (0.0416179); expected 273.4 (0.02)
Passed bias filter:                      426  (0.0311586); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 923.60
//
Query:       MMETSP1325-20131115|14418_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-14   51.2   0.0    7.4e-14   51.1   0.0    1.0  1  PF00085.15 Thioredoxin
    5.6e-05   23.1   0.0    5.7e-05   23.1   0.0    1.1  1  PF13098.1  Thioredoxin-like domain
     0.0019   16.9   0.0     0.0019   16.9   0.0    1.0  1  PF01216.12 Calsequestrin
     0.0047   16.7   0.0      0.005   16.5   0.0    1.1  1  PF07449.6  Hydrogenase-1 expression protein HyaE
  ------ inclusion threshold ------
       0.12   12.0   0.0       0.12   12.0   0.0    1.1  1  PF13192.1  Thioredoxin domain


Domain annotation for each model (and alignments):
>> PF00085.15  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1   0.0   2.7e-17   7.4e-14      36      98 ..       1      65 [.       1      66 [] 0.95

  Alignments for each domain:
  == domain 1    score: 51.1 bits;  conditional E-value: 2.7e-17
                 HHHHHHHHHHHTT-...TSEEEEEETTTTHHHHHHTT--SSSEEEEESSSSEEEEE---.-HHHHH CS
   PF00085.15 36 laPeyeklaeelke...kvvlakvdvdenkdlaseygvegiPtlklfkngkkveevegarekeklv 98
                 laPey+k+a+el +    + la vd++e++ la++ygv+g+Ptlk+fkng+ + e+eg+r+++++v
  MMETSP1325-20131115|14418_1  1 LAPEYAKAATELLKldePLHLAMVDATEERVLAEKYGVRGFPTLKFFKNGEPI-EYEGGRTAKDMV 65
                 79*********9999999*******************************9998.9*****999886 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   2.1e-08   5.7e-05      68     108 ..      26      64 ..       3      66 .] 0.77

  Alignments for each domain:
  == domain 1    score: 23.1 bits;  conditional E-value: 2.1e-08
    PF13098.1  68 kleekelgrklgvrgtPtivfldgeGklvarlpGylpaeel 108
                  ++ee+ l++k+gvrg Pt+ f+ ++G+++  ++G  +a+++
  MMETSP1325-20131115|14418_1  26 ATEERVLAEKYGVRGFPTLKFF-KNGEPI-EYEGGRTAKDM 64 
                  346678****************.59**99.59999999887 PP

>> PF01216.12  Calsequestrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     7e-07    0.0019      89     137 ..      17      65 ..       6      66 .] 0.88

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 7e-07
                  T----EEEETTTTHHHHHC--------EEEE----EEEE-----HHHHH CS
   PF01216.12  89 kgvgfglvdsekdaavakklgldeedslyvlkgdevieydgefsadvlv 137
                    + +++vd+ ++  +a k g+    +l  +k+ e iey+g  +a  +v
  MMETSP1325-20131115|14418_1  17 EPLHLAMVDATEERVLAEKYGVRGFPTLKFFKNGEPIEYEGGRTAKDMV 65 
                  557789**********************************998887665 PP

>> PF07449.6  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.8e-06     0.005      59      94 ..      17      52 ..       3      57 .. 0.85

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 1.8e-06
    PF07449.6 59 qalraavvareqeealaerfgvlrlPsllflrdgey 94
                 + l+ a+v + +e  lae++gv+ +P+l f+++ge 
  MMETSP1325-20131115|14418_1 17 EPLHLAMVDATEERVLAEKYGVRGFPTLKFFKNGEP 52
                 556778899999********************9986 PP

>> PF13192.1  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.5e-05      0.12      17      54 ..       6      47 ..       2      65 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.5e-05
    PF13192.1 17 eeavkeaaeelg.ikaevekvtdfeei.ekygVmsvPal..v 54
                 ++a++e ++  + +++ ++++t+ + + ekygV   P+l  +
  MMETSP1325-20131115|14418_1  6 AKAATELLKLDEpLHLAMVDATEERVLaEKYGVRGFPTLkfF 47
                 5667777777766999*********************99634 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       136  (0.00994734); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.32u 0.40s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 310.12
//
Query:       MMETSP1325-20131115|14421_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-12   47.2   0.4    2.9e-12   46.2   0.3    1.4  1  PF00276.15 Ribosomal protein L23
  ------ inclusion threshold ------
      0.041   13.5   0.1      0.073   12.7   0.1    1.6  1  PF01282.14 Ribosomal protein S24e
       0.11    9.8   0.0       0.12    9.7   0.0    1.0  1  PF03395.9  Poxvirus P4A protein


Domain annotation for each model (and alignments):
>> PF00276.15  Ribosomal protein L23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.3   6.3e-16   2.9e-12      21      83 ..       6      75 ..       2      78 .. 0.82

  Alignments for each domain:
  == domain 1    score: 46.2 bits;  conditional E-value: 6.3e-16
   PF00276.15 21 nkyvFkVdkkanKteikdaveeifgVkvvkvntlilkgkvkRngqvlgrk.....k..syKkaivtLeeg 83
                  ++ FkV+++++K eik+++ +i+++ v  v t + ++k kR+  + grk     k    K+a+vtLe+g
  MMETSP1325-20131115|14421_1  6 PQAIFKVPPRMTKHEIKEYLTKIYNLPVQRVMTANFDPKWKRHFAYGGRKivpykKsvAFKRAYVTLEKG 75
                 5899**************************************8776666422222322579*******98 PP

>> PF01282.14  Ribosomal protein S24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.6e-05     0.073      11      41 ..      14      44 ..       7      78 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.6e-05
                 ----HHHHHHHHHHHHTS-CTTEEEEEEEE- CS
   PF01282.14 11 atpsrkevrekLAamlkvdkelvvvfglkte 41
                 +  ++ e++e L ++++ + ++v+  +++ +
  MMETSP1325-20131115|14421_1 14 PRMTKHEIKEYLTKIYNLPVQRVMTANFDPK 44
                 67899*******************9999865 PP

>> PF03395.9  Poxvirus P4A protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   2.6e-05      0.12     542     578 ..       8      42 ..       5      60 .. 0.93

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 2.6e-05
    PF03395.9 542 ivirvrkRvtkdyikriLrKnscskneadKlltaigd 578
                   +++v +R+tk+ ik+ L K ++   +  +++ta +d
  MMETSP1325-20131115|14421_1   8 AIFKVPPRMTKHEIKEYLTKIYNLPVQ--RVMTANFD 42 
                  578999*******************99..****9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 344.20
//
Query:       MMETSP1325-20131115|14420_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        81  (0.00592452); expected 273.4 (0.02)
Passed bias filter:                       80  (0.00585138); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.53
# Mc/sec: 321.02
//
Query:       MMETSP1325-20131115|14425_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 413.49
//
Query:       MMETSP1325-20131115|14428_1  [L=238]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-54  184.1   0.0    1.2e-54  183.9   0.0    1.1  1  PF00071.17 Ras family
    1.6e-20   73.6   0.0    2.7e-20   72.9   0.0    1.3  1  PF08477.8  Miro-like protein
      2e-13   49.8   0.0    2.4e-13   49.5   0.0    1.1  1  PF00025.16 ADP-ribosylation factor family
      8e-08   31.6   0.0    1.1e-07   31.2   0.0    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    1.2e-06   28.3   0.0    1.9e-06   27.7   0.0    1.3  1  PF01926.18 50S ribosome-binding GTPase
    7.7e-06   25.3   0.0    0.00013   21.3   0.0    2.0  1  PF00009.22 Elongation factor Tu GTP binding domain
     0.0011   18.1   0.0     0.0017   17.4   0.0    1.4  1  PF03193.11 Protein of unknown function, DUF258
     0.0014   18.6   0.0     0.0033   17.4   0.0    1.6  1  PF13401.1  AAA domain
     0.0022   18.2   0.4     0.0044   17.3   0.3    1.9  1  PF13191.1  AAA ATPase domain
     0.0045   16.4   0.1      0.011   15.2   0.1    1.6  1  PF13479.1  AAA domain
     0.0061   15.4   0.2      0.038   12.8   0.0    1.9  2  PF00735.13 Septin
  ------ inclusion threshold ------
      0.016   14.2   0.0      0.022   13.8   0.0    1.3  1  PF09439.5  Signal recognition particle receptor beta subunit
      0.022   14.3   0.0      0.057   13.0   0.0    1.8  1  PF07728.9  AAA domain (dynein-related subfamily)
      0.024   14.2   0.0      0.037   13.6   0.0    1.3  1  PF01637.13 Archaeal ATPase
      0.028   14.0   0.0       0.04   13.5   0.0    1.2  1  PF03266.10 NTPase
       0.05   12.9   0.1       0.16   11.3   0.0    1.8  2  PF10662.4  Ethanolamine utilisation - propanediol utilisation
      0.062   12.7   0.3        3.1    7.1   0.0    2.2  2  PF03029.12 Conserved hypothetical ATP binding protein
      0.063   12.8   0.0       0.21   11.1   0.0    1.8  1  PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
      0.068   12.6   0.0       0.12   11.8   0.0    1.4  1  PF05729.7  NACHT domain
      0.083   12.0   0.0       0.16   11.0   0.0    1.4  1  PF12846.2  AAA-like domain
      0.099   11.9   0.1       0.23   10.7   0.0    1.7  2  PF02492.14 CobW/HypB/UreG, nucleotide-binding domain


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.9   0.0   1.9e-57   1.2e-54       1     159 [.      10     175 ..      10     178 .. 0.97

  Alignments for each domain:
  == domain 1    score: 183.9 bits;  conditional E-value: 1.9e-57
                  EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST....TTSSEEEE---TTGGGG-SS-HHHHHHHHHHTT...EEE---BTTTTTTHHHHHHHHHHH CS
   PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae....envpivLvGnKvDleekravsteegeelakelg...lkfletSAktnenveeafeellre 159
                  K++++Gds+vGKtsl++++v+++F+ +y++Tig+df+tke+++d+k v+++iwDTAGqe+f+sl  ++yr+a++++lvyd+t  ++f+++++w +e+ ++a+    +++p+v+vGnKvD e++r v+++++++++k +g   l+++etSAk++ +v+ +f+e+++ 
  MMETSP1325-20131115|14428_1  10 KVIILGDSGVGKTSLMNQYVSKRFSAQYKATIGADFLTKEVMIDDKLVTIQIWDTAGQERFQSLGVAFYRGADACILVYDVTAPNTFDRLQNWRSEFLSQASpsdpDSFPFVVVGNKVDKESERRVQKSRAQAWCKAQGtnpLAYFETSAKDALQVDATFQEAAQL 175
                  89**************************************************************************************************99999999**************************9887655789******************9986 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.9   0.0   4.1e-23   2.7e-20       1     119 []      10     128 ..      10     128 .. 0.87

  Alignments for each domain:
  == domain 1    score: 72.9 bits;  conditional E-value: 4.1e-23
    PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtel..lelwdlggreelkkehelllkkadaillvydltdeesleevsellaw.laelrklgkk.ipvilvgnklD 119
                  kv+++Gd+gvGK+sl +q+v++ f+    ++ ++g++   k++ +  d++l  +++wd++g+e++++    + + ada +lvyd+t +++++++++  ++ l++++ ++    p ++vgnk D
  MMETSP1325-20131115|14428_1  10 KVIILGDSGVGKTSLMNQYVSKRFS--AQYKATIGADFLTKEVMI--DDKLvtIQIWDTAGQERFQSLGVAFYRGADACILVYDVTAPNTFDRLQNWRSEfLSQASPSDPDsFPFVVVGNKVD 128
                  89***********************..888888888888555555..555555**************88888***********************99877367777788778*********98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.0   3.7e-16   2.4e-13      14     139 ..       8     141 ..       1     174 [. 0.80

  Alignments for each domain:
  == domain 1    score: 49.5 bits;  conditional E-value: 3.7e-16
                  EEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S..-EEEEEEE..TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CT...THHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HHHHHHH CS
   PF00025.16  14 elrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadre...RleeakeeLkalleeeelkevallvlaNKqDlpealseeelrel 139
                   l++++lG  + GKt +++++ +++++   + Tig  f ++e++i  k +++++wD  Gqe+  +l   +++  da i v D++  +   Rl++ ++e+ +  + ++  + +++v++NK D ++    ++ r++
  MMETSP1325-20131115|14428_1   8 LLKVIILGDSGVGKTSLMNQYVSKRFSAqYKATIGadFLTKEVMIddKLVTIQIWDTAGQERFQSLGVAFYRGADACILVYDVTAPNtfdRLQNWRSEFLSQASPSDPDSFPFVVVGNKVDKESERRVQKSRAQ 141
                  479*********************99753889998445689999966779********************************987543338999999999999999999************9987776665554 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   1.6e-10   1.1e-07       1     161 [.      10     161 ..      10     169 .. 0.76

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 1.6e-10
    PF04670.7   1 klLLmGksgsGKtS.mrsiiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfq.eileallqyspeakvfvli.hKmDlisedereeifeerkeeireeiedleieeleffaTSiwd 161
                  k++++G sg GKtS m++ + ++++a+   ++ga   ++++ +   + +++++wD+ Gqe+f++          ++  ++ i V D++  +  + l++++ e l+++  ++p+   fv + +K+D   ++ +++++++r++   +         l +f+TS+ d
  MMETSP1325-20131115|14428_1  10 KVIILGDSGVGKTSlMNQYVSKRFSAQYKATIGADF-LTKEVMIDDKLVTIQIWDTAGQERFQSLG-----VAFYRGADACILVYDVTAPNTFDRLQNWRsEFLSQASPSDPDSFPFVVVgNKVD---KESERRVQKSRAQAWCKAQGTN---PLAYFETSAKD 161
                  89************5566777778888777777766.444444456778**********9999885.....68999************8887777777762578889999999887777746888...5666677777776665544443...48888888755 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   2.9e-09   1.9e-06       1      91 [.      10      94 ..      10     126 .. 0.62

  Alignments for each domain:
  == domain 1    score: 27.7 bits;  conditional E-value: 2.9e-09
                 EEEEE--TT---HHHHHHHHCST....CTEETS-TT-SSSESEEEEETTE...EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTSHH CS
   PF01926.18  1 evaivGrpNvGKStLinaLtgek....aakvsdypgtTrditenevkkek...iilvDtPGiiegasedkeiegikkylekveradvlllvvdasavl 91
                 +v+i+G + vGK++L+n+ + ++    ++ +    + T+++++    ++k   i+++Dt+G        +   +++   +  + ad+ +lv d++a++
  MMETSP1325-20131115|14428_1 10 KVIILGDSGVGKTSLMNQYVSKRfsaqYKATIGADFLTKEVMI----DDKlvtIQIWDTAGQE------R---FQSLGVAFYRGADACILVYDVTAPN 94
                 699*****************75432222222223355555544....34445578******32......2...2233466779999999999976644 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0     2e-07   0.00013      66     177 ..      53     167 ..       6     179 .. 0.74

  Alignments for each domain:
  == domain 1    score: 21.3 bits;  conditional E-value: 2e-07
                  .ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.....S-HHHHHHHHHHHHTT--...EEEEEE-TTST.CHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHHH CS
   PF00009.22  66 etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqTeevlrlakklgvk...iivviNKiDrv.eaeleeiveelkekllekylekgeeevpvvpgSalkgegida 177
                  + k  +i++ Dt G + F +   +  r +D+++lv d++        ++   e l +a+  +     ++vv NK+D+  e ++++   ++    ++ ++++       + +Sa+++ ++da
  MMETSP1325-20131115|14428_1  53 DDKLVTIQIWDTAGQERFQSLGVAFYRGADACILVYDVTAPntfdrLQNWRSEFLSQASPSDPDsfpFVVVGNKVDKEsERRVQKSRAQAW---CKAQGTN---PLAYFETSAKDALQVDA 167
                  57888999*******************************77677779999999999998876544549********985555555555544...4444443...46777777777777775 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   2.7e-06    0.0017      38      59 ..      11      32 ..       4      76 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 2.7e-06
                 EEEE-------HHHHHHH---- CS
   PF03193.11 38 svlvGqSGvGKSsLinallpel 59
                 ++++G SGvGK+sL+n+ +++ 
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYVSKR 32
                 6899*************99875 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   5.1e-06    0.0033       7      37 ..      11      53 ..       8     109 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 5.1e-06
    PF13401.1  7 lvvtGesGvGKTtllrrlarqldeeaeaae............k 37
                 +++ G sGvGKT l++++++++   ++ a+            +
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYVSKRFSAQYKATigadfltkevmiD 53
                 6899***************987554444445555555555553 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.3   6.7e-06    0.0044      26      53 ..      11      38 ..       3     212 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.3 bits;  conditional E-value: 6.7e-06
    PF13191.1 26 llvtGpsGiGKSsLlrelakpillerlr 53
                 ++++G+sG+GK+sL+++     + +++ 
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYVSKRFSAQYK 38
                 789**************55444444333 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.7e-05     0.011       4      23 ..       9      28 ..       6      40 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.7e-05
    PF13479.1  4 ikvliYGkpGiGKTslaktl 23
                 +kv+i+G++G+GKTsl+ + 
  MMETSP1325-20131115|14428_1  9 LKVIILGDSGVGKTSLMNQY 28
                 69**************9765 PP

>> PF00735.13  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   5.8e-05     0.038       4      49 ..       8      52 ..       5      66 .. 0.70
   2 ?    0.5   0.0      0.35   2.3e+02     199     227 ..     116     143 ..      94     151 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 5.8e-05
   PF00735.13  4 eftlmvvGesglGkttlintlfetdlieeeeeleeakeekkktvei 49
                  + +++ G+sg+Gkt+l+n  ++++   +  + +  ++  +k+v i
  MMETSP1325-20131115|14428_1  8 LLKVIILGDSGVGKTSLMNQYVSKRFSAQY-KATIGADFLTKEVMI 52
                 5889****************9999887774.333333444444444 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.35
   PF00735.13 199 eslPfaivgsnelvekedgkkvrgRkypW 227
                  +s+Pf +vg +   e+ + +  ++R+  W
  MMETSP1325-20131115|14428_1 116 DSFPFVVVGNKVDKES-ERRVQKSRAQAW 143
                  689*****97766555.555667888888 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   3.4e-05     0.022       5      64 ..      10      72 ..       6     142 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.8 bits;  conditional E-value: 3.4e-05
                 EEEEE--TT---HHHHHHHHHSS-------S..S-EEETT-....-----EEEE----GGGGH CS
    PF09439.5  5 avllvGlsdsGKTslftrLttdsvkktvtSq..essaalkv.ksekgkkltliDfPGheklrq 64
                 +v+++G s  GKTsl+++  ++ +   + +   +  ++++v  ++k  ++++ D  G+e++++
  MMETSP1325-20131115|14428_1 10 KVIILGDSGVGKTSLMNQYVSKRFSAQYKATigADFLTKEVmIDDKLVTIQIWDTAGQERFQS 72
                 69********************77666655444555566654667778889999999999865 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   8.8e-05     0.057       2      44 ..      11      54 ..      10     139 .. 0.75

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 8.8e-05
                 EEEE------HHHHHHHG.GGGBS--EEEEE--TT--HHHH--- CS
    PF07728.9  2 vlLvGppGtgKselaerl.aealnreveyvqltrdtteedlkgr 44
                 v+++G++G+gK++l+ ++ ++++ +++    + +++t+e ++  
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYvSKRFSAQYKATIGADFLTKEVMIDD 54
                 89**********99876516777888888888888888877654 PP

>> PF01637.13  Archaeal ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   5.7e-05     0.037      23      48 ..      11      36 ..       4      63 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 5.7e-05
                 EEEE--TT---HHHHHHHHHH-..-- CS
   PF01637.13 23 iviyGprrsGKTaLlkeileelkekg 48
                 ++i+G  ++GKT+L+++ ++++ + +
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYVSKRFSAQ 36
                 689****************9984333 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.2e-05      0.04       1      57 [.      10      69 ..      10      91 .. 0.81

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 6.2e-05
                 EEEEE-------HHHHHHHHHH-...---E.E-..-EEE-----------EEE--.---E CS
   PF03266.10  1 rvfiTGepgvGKtTlvkkvlellksegvkv.gG..fyteevreggrrigfdivdlasger 57
                 +v+i G++gvGKt l+++ +++  s ++k   G  f+t+ev+ + + +  +i d a  er
  MMETSP1325-20131115|14428_1 10 KVIILGDSGVGKTSLMNQYVSKRFSAQYKAtIGadFLTKEVMIDDKLVTIQIWDTAGQER 69
                 58999***********99877766666664235559***************999954443 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00025      0.16       3      32 ..      10      41 ..       8      54 .. 0.71
   2 ?   -1.9   0.0       2.9   1.9e+03      97     132 ..     125     163 ..     117     172 .. 0.62

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 0.00025
    PF10662.4  3 killiGkvgaGKTtLtqalkgeel..kykkTQ 32
                 k++++G +g+GKT+L+++   ++   +yk T 
  MMETSP1325-20131115|14428_1 10 KVIILGDSGVGKTSLMNQYVSKRFsaQYKATI 41
                 89*************97766555423666665 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 2.9
    PF10662.4  97 Tkidlaedeenie..lveelLkaaGaeki..fevsaveke 132
                   k+d+  +e +++  +++ + ka G + +  fe+sa +  
  MMETSP1325-20131115|14428_1 125 NKVDKE-SERRVQksRAQAWCKAQGTNPLayFETSAKDAL 163
                  577776.455554114567788888876655777766555 PP

>> PF03029.12  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.044        28       1      20 [.      13      32 ..      13      41 .. 0.77
   2 ?    7.1   0.0    0.0048       3.1      74     179 ..      45     143 ..      38     203 .. 0.62

  Alignments for each domain:
  == domain 1    score: 4.0 bits;  conditional E-value: 0.044
   PF03029.12  1 vvGpaGsGKttfvgalseil 20
                 ++G  G+GKt+++++ ++ +
  MMETSP1325-20131115|14428_1 13 ILGDSGVGKTSLMNQYVSKR 32
                 6899*********9877655 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0048
   PF03029.12  74 flrekldwldeeleekeddyvlfDtPGQielftlseslakiveaLesefalvvvylvDsqrltd...ptkfisgllsalsimlklelPhvvalnkfDllkek...lekelef 179
                  fl++++  +d++l        + Dt GQ ++  l  +          ++a  ++ + D +  ++     ++ s+ ls  s     + P+vv+ nk+D  +e+   + ++  +
  MMETSP1325-20131115|14428_1  45 FLTKEV-MIDDKL----VTIQIWDTAGQERFQSLGVAFY--------RGADACILVYDVTAPNTfdrLQNWRSEFLSQASPSDPDSFPFVVVGNKVDKESERrvqKSRAQAW 143
                  444444.333333....3667889999998887766666........55555555555554444444788888888889999999*************88666632222333 PP

>> PF03205.9  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00033      0.21       3      32 ..      11      40 ..       9      45 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00033
                 EEEE-------HHHHHHHHHHHHH------ CS
    PF03205.9  3 vavvGpkdsGKTtlieklvnklkergyrva 32
                 v++ G +++GKT+l+ + v k  + +y+ +
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYVSKRFSAQYKAT 40
                 7899**************999988888866 PP

>> PF05729.7  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00019      0.12       3      22 ..      11      30 ..       9      40 .. 0.86

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00019
    PF05729.7  3 vilqGeaGsGKTtLlqklas 22
                 vi+ G++G+GKT L+ + +s
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYVS 30
                 89*************98766 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00024      0.16       5      29 ..      12      36 ..      11      50 .. 0.83

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00024
    PF12846.2  5 lilGppGsGKSvllkklvlqllarg 29
                 +ilG++G GK++l++  v+   ++ 
  MMETSP1325-20131115|14428_1 12 IILGDSGVGKTSLMNQYVSKRFSAQ 36
                 79*************9987766655 PP

>> PF02492.14  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00035      0.23       3      47 ..      11      57 ..       9      92 .. 0.78
   2 ?   -1.8   0.0       2.5   1.6e+03     145     157 ..     121     133 ..      80     148 .. 0.72

  Alignments for each domain:
  == domain 1    score: 10.7 bits;  conditional E-value: 0.00035
                 EEEE-------HHHHHHHHCHS---S-EEEEES----..-HCCCCCH CS
   PF02492.14  3 tvltGflGsGKTtLleklleknreglkiaVivndfge..tkiDaell 47
                 +++ G  G GKT+L++++++k+   +  a i  df +  + iD +l+
  MMETSP1325-20131115|14428_1 11 VIILGDSGVGKTSLMNQYVSKRFSAQYKATIGADFLTkeVMIDDKLV 57
                 78999**************7555555567788888532377777776 PP

  == domain 2    score: -1.8 bits;  conditional E-value: 2.5
                  EEEEE-CCCTTTT CS
   PF02492.14 145 livlnKiDlldae 157
                  ++v nK+D  +++
  MMETSP1325-20131115|14428_1 121 VVVGNKVDKESER 133
                  6778888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       392  (0.0286717); expected 273.4 (0.02)
Passed bias filter:                      353  (0.0258192); expected 273.4 (0.02)
Passed Vit filter:                        81  (0.00592452); expected 13.7 (0.001)
Passed Fwd filter:                        21  (0.00153599); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.64u 0.40s 00:00:01.04 Elapsed: 00:00:00.56
# Mc/sec: 1000.58
//
Query:       MMETSP1325-20131115|14437_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       181  (0.0132387); expected 273.4 (0.02)
Passed bias filter:                      172  (0.0125805); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 431.34
//
Query:       MMETSP1325-20131115|14439_1  [L=150]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 764.79
//
Query:       MMETSP1325-20131115|14444_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0069   15.2   0.0     0.0081   15.0   0.0    1.1  1  PF12780.2 P-loop containing dynein motor region D4


Domain annotation for each model (and alignments):
>> PF12780.2  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.9e-07    0.0081       7      30 ..      37      60 ..      30      62 .] 0.89

  Alignments for each domain:
  == domain 1    score: 15.0 bits;  conditional E-value: 5.9e-07
    PF12780.2  7 vmnlvlfedavrhvcrinrilesp 30
                  m lv+f da+rhv  i ril  p
  MMETSP1325-20131115|14444_1 37 PMPLVMFMDAIRHVSCIARILRQP 60
                 699******************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       558  (0.0408133); expected 273.4 (0.02)
Passed bias filter:                      551  (0.0403013); expected 273.4 (0.02)
Passed Vit filter:                        45  (0.0032914); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 303.21
//
Query:       MMETSP1325-20131115|14450_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-13   50.2   0.0    1.7e-13   50.0   0.0    1.1  1  PF07973.9 Threonyl and Alanyl tRNA synthetase second additional domain


Domain annotation for each model (and alignments):
>> PF07973.9  Threonyl and Alanyl tRNA synthetase second additional domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   1.3e-17   1.7e-13       3      44 .]       1      51 [.       1      51 [. 0.98

  Alignments for each domain:
  == domain 1    score: 50.0 bits;  conditional E-value: 1.3e-17
                 EEEETTTEEEE------SB----..---EEE.......EEEES----EEEE CS
    PF07973.9  3 vvsiGdvsvelCgGtHvpnTgeI..gafkil.......seesiakglrRIy 44
                 ++++Gd +++lC G+Hv++Tg+I  +a+ ++       ++++ +++l+RIy
  MMETSP1325-20131115|14450_1  1 LYHVGDEWWDLCAGPHVEHTGQIspKAVDLQsvagaywRGDESKAMLTRIY 51
                 59************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 344.48
//
Query:       MMETSP1325-20131115|14452_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 216.14
//
Query:       MMETSP1325-20131115|14453_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      116  (0.00848449); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 305.42
//
Query:       MMETSP1325-20131115|14454_1  [L=44]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-07   29.7   0.1    5.2e-07   29.7   0.1    1.0  1  PF12796.2  Ankyrin repeats (3 copies)
    3.2e-06   26.5   0.0      0.054   13.2   0.0    2.0  2  PF00023.25 Ankyrin repeat
    0.00085   19.6   0.0    0.00092   19.5   0.0    1.1  1  PF13637.1  Ankyrin repeats (many copies)
    0.00094   19.2   0.0     0.0017   18.3   0.0    1.4  2  PF13857.1  Ankyrin repeats (many copies)
     0.0086   16.1   0.0        3.7    7.9   0.0    2.1  2  PF13606.1  Ankyrin repeat


Domain annotation for each model (and alignments):
>> PF12796.2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.1   1.9e-10   5.2e-07      42      83 ..       2      43 ..       1      44 [] 0.94

  Alignments for each domain:
  == domain 1    score: 29.7 bits;  conditional E-value: 1.9e-10
    PF12796.2 42 vklLleagadvnakdkegntpLhlAvrnghlelvklLlekga 83
                 +++L+e+gad+nak+k g+t+L +A +++++++v  L  +ga
  MMETSP1325-20131115|14454_1  2 LEVLVEKGADLNAKSKVGKTALDYAKQKNKTDCVAALQRAGA 43
                 589********************************9988886 PP

>> PF00023.25  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   4.5e-05      0.12      19      32 ..       3      16 ..       1      17 [. 0.88
   2 !   13.2   0.0     2e-05     0.054       2      26 ..      19      43 ..      18      44 .] 0.96

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 4.5e-05
                 HHHHHTTSSTTHBH CS
   PF00023.25 19 klLlsqGAdlnaqd 32
                 + L+++GAdlna+ 
  MMETSP1325-20131115|14454_1  3 EVLVEKGADLNAKS 16
                 78**********86 PP

  == domain 2    score: 13.2 bits;  conditional E-value: 2e-05
                 SCBHHHHHHHTTHHHHHHHHHHTTS CS
   PF00023.25  2 GfTPLHlAalrgnlevvklLlsqGA 26
                 G T+L +A +++ +++v  L  +GA
  MMETSP1325-20131115|14454_1 19 GKTALDYAKQKNKTDCVAALQRAGA 43
                 89******************99998 PP

>> PF13637.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.4e-07   0.00092      17      53 ..       2      38 ..       1      39 [. 0.93

  Alignments for each domain:
  == domain 1    score: 19.5 bits;  conditional E-value: 3.4e-07
    PF13637.1 17 vklLlekgidinrtdesGntaLhiAalrgnieilklL 53
                 ++ L+ekg+d+n++ + G taL++A +++  +++  L
  MMETSP1325-20131115|14454_1  2 LEVLVEKGADLNAKSKVGKTALDYAKQKNKTDCVAAL 38
                 5789**********999****************9987 PP

>> PF13857.1  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   6.3e-07    0.0017      32      56 .]       2      26 ..       1      26 [. 0.94
   2 ?   -2.1   0.0       1.8   4.8e+03      29      36 ..      32      39 ..      28      43 .. 0.53

  Alignments for each domain:
  == domain 1    score: 18.3 bits;  conditional E-value: 6.3e-07
    PF13857.1 32 vrlLlapgadlnlrdsdgltaldlA 56
                 ++ L+++gadln++ + g tald+A
  MMETSP1325-20131115|14454_1  2 LEVLVEKGADLNAKSKVGKTALDYA 26
                 57899*******************9 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 1.8
    PF13857.1 29 levvrlLl 36
                 +++v  L 
  MMETSP1325-20131115|14454_1 32 TDCVAALQ 39
                 55554444 PP

>> PF13606.1  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0013       3.7      18      30 .]       2      14 ..       1      14 [. 0.90
   2 !    6.7   0.0    0.0033       8.9       2      26 ..      19      43 ..      18      44 .] 0.89

  Alignments for each domain:
  == domain 1    score: 7.9 bits;  conditional E-value: 0.0013
    PF13606.1 18 veaLlengadina 30
                 +e L+e+gad+na
  MMETSP1325-20131115|14454_1  2 LEVLVEKGADLNA 14
                 689********97 PP

  == domain 2    score: 6.7 bits;  conditional E-value: 0.0033
    PF13606.1  2 GnTpLhlAasngrielveaLlenga 26
                 G T+L++A ++++++ v aL ++ga
  MMETSP1325-20131115|14454_1 19 GKTALDYAKQKNKTDCVAALQRAGA 43
                 78******99999**9999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (44 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       305  (0.0223084); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.30u 0.40s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 202.77
//
Query:       MMETSP1325-20131115|14456_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.39s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 253.20
//
Query:       MMETSP1325-20131115|14458_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.6   0.0       0.13   11.3   0.0    1.1  1  PF13278.1 Putative amidotransferase


Domain annotation for each model (and alignments):
>> PF13278.1  Putative amidotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   9.8e-06      0.13     112     158 ..      18      66 ..       8      70 .. 0.75

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 9.8e-06
    PF13278.1 112 Ldgreatthwtlkealrea...ypkvsldedrlfvadgkliTagGvlaal 158
                  L+ +++t +w++++ +++a   y    ++  r++v +g l+T++Gv +++
  MMETSP1325-20131115|14458_1  18 LNPHSFTHSWRRAQVMEAArkeYAGHVWN-GRMMVGSGVLATSAGVGGTV 66 
                  67788899998876665541116665566.***************97765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      323  (0.0236249); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.44s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 377.89
//
Query:       MMETSP1325-20131115|14462_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       258  (0.0188707); expected 273.4 (0.02)
Passed bias filter:                      226  (0.0165301); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 436.14
//
Query:       MMETSP1325-20131115|14464_1  [L=280]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-18   66.0   7.5    2.7e-07   30.8   0.2    4.3  4  PF08238.7 Sel1 repeat
     0.0089   16.4   0.0      0.026   14.9   0.0    1.7  2  PF14226.1 non-haem dioxygenase in morphine synthesis N-terminal


Domain annotation for each model (and alignments):
>> PF08238.7  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.3   6.3e-09   4.3e-05       2      39 .]       4      38 ..       3      38 .. 0.91
   2 !   30.8   0.2     4e-11   2.7e-07       3      39 .]      41      75 ..      39      75 .. 0.94
   3 ?    0.5   0.0      0.14   9.8e+02      11      35 ..      84     107 ..      79     110 .. 0.71
   4 !   11.9   0.0   3.5e-05      0.24       1      34 [.     112     142 ..     112     147 .. 0.84

  Alignments for each domain:
  == domain 1    score: 23.8 bits;  conditional E-value: 6.3e-09
    PF08238.7  2 eAqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 eA+y+LG+ y  + G+ Gv+ d+ekAl  +++ A+++h
  MMETSP1325-20131115|14464_1  4 EAAYALGTAY--KWGQ-GVDSDLEKALDFFQMGADKDH 38
                 8******555..***9.9*999*************988 PP

  == domain 2    score: 30.8 bits;  conditional E-value: 4e-11
    PF08238.7  3 AqynLGlyymylnGlgGvpkdpekAleWyekAAeqGh 39
                 +q +L+   +y++G+g + kd+ +A++W ekAAe+Gh
  MMETSP1325-20131115|14464_1 41 SQHALA--SLYEEGEGPIAKDLFEARKWHEKAAEKGH 75
                 799***..999****88*******************9 PP

  == domain 3    score: 0.5 bits;  conditional E-value: 0.14
    PF08238.7  11 ymylnGlgG.vpkdpekAleWyekAA 35 
                  ++ +nG+gG v  d++ A+ ++   A
  MMETSP1325-20131115|14464_1  84 RLCFNGDGGmV--DLDMARFHWSACA 107
                  56679997767..9999988776655 PP

  == domain 4    score: 11.9 bits;  conditional E-value: 3.5e-05
    PF08238.7   1 aeAqynLGlyymylnGlgGvpkdpekAleWyekA 34 
                  + A+  LG  ++y nG  Gv++ ++k+++ ++k 
  MMETSP1325-20131115|14464_1 112 PSACTSLG--MLYVNGH-GVEQSLAKGRKFLQKG 142
                  679999**..5558**8.9************996 PP

>> PF14226.1  non-haem dioxygenase in morphine synthesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.2     8e+03      33      48 ..      36      51 ..      25      73 .. 0.64
   2 !   14.9   0.0   3.7e-06     0.026      19      43 ..     110     134 ..      94     138 .. 0.87

  Alignments for each domain:
  == domain 1    score: -2.8 bits;  conditional E-value: 1.2
    PF14226.1 33 vnhgvpeelieevfea 48
                 + hg +++ ++ ++e 
  MMETSP1325-20131115|14464_1 36 KDHGHSQHALASLYEE 51
                 4566666666555554 PP

  == domain 2    score: 14.9 bits;  conditional E-value: 3.7e-06
    PF14226.1  19 elreAceevGffqvvnhgvpeelie 43 
                  ++ +Ac++ G+++v +hgv+++l +
  MMETSP1325-20131115|14464_1 110 NIPSACTSLGMLYVNGHGVEQSLAK 134
                  6889*****************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       272  (0.0198947); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.35s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1427.62
//
Query:       MMETSP1325-20131115|14469_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       267  (0.019529); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.56
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|14479_1  [L=154]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.029   14.0   0.0      0.038   13.6   0.0    1.2  1  PF12695.2  Alpha/beta hydrolase family
      0.085   12.6   0.0        0.1   12.3   0.0    1.2  1  PF12697.2  Alpha/beta hydrolase family
       0.09   12.6   0.0       0.13   12.1   0.0    1.1  1  PF01592.11 NifU-like N terminal domain


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.4e-06     0.038      94     141 ..      88     136 ..      27     137 .. 0.66

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 8.4e-06
    PF12695.2  94 gedlakltlpvllihGtrDgvvppeeaeklakalp.gdaelvviegasH 141
                  ++d+  ltlp+l++hGt+D  ++p  ++  ++ +  +d+ +   eg  H
  MMETSP1325-20131115|14479_1  88 RDDFGLLTLPILIFHGTEDLCTDPRGSQMCFDGAAsEDKSYRKWEGFYH 136
                  455666666*************999888877776668888888888777 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.2e-05       0.1      91     197 ..       5     116 ..       1     145 [. 0.58

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.2e-05
                  EEEEEEE------STT.....---TTHHHHHHHHHH----....--H..HHHHH-.----HHHHHH--GGGG....GG........------HHHHTT--S-EEEEE-----HHHHHHHHH CS
    PF12697.2  91 vrglvlidppgplpas.....alrpagpsllrrllagraaalrdlaarafarlfd.gdelealvradaaalaellraa........lldadlrealarldvPvlviageaDrvvppeearr 197
                  ++gl+l +p+++                + + + +a+ a+ lr +aa a  ++   +++++++v   a+ l ++ + +             +r++++ l++P+l+ +g++D  ++p+  + 
  MMETSP1325-20131115|14479_1   5 FSGLILTSPALYVNLTcvmkiQ------QPFGGCMAAIAPKLRLVAAVAPKDMSRnEETVNDYV---ADPLNDMGKLRiktamegdVGMKKARDDFGLLTLPILIFHGTEDLCTDPRGSQM 116
                  7888888888866665655431......223334444444455554443333332233334444...34444444444666666666778889*******************999655543 PP

>> PF01592.11  NifU-like N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.8e-05      0.13      60     120 ..      31      91 ..      20      94 .. 0.93

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 2.8e-05
                  --HHHHHHHHHHHHHH---BHHHHHHHHHHHHHHHTT---GCSCCCCH---HHHHHHHCCC CS
   PF01592.11  60 GCgsaiAsssaltelvkgktleeAlkitnkdiaeelgglpkekmhcsvlaeealkaavakY 120
                  GC +aiA    l+ +v  k++ + ++  n+ +a+ l++++k +++ ++ ++  +k+a  ++
  MMETSP1325-20131115|14479_1  31 GCMAAIAPKLRLVAAVAPKDMSRNEETVNDYVADPLNDMGKLRIKTAMEGDVGMKKARDDF 91 
                  9***********************************************9999999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       198  (0.0144822); expected 273.4 (0.02)
Passed bias filter:                      197  (0.014409); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 785.19
//
Query:       MMETSP1325-20131115|14485_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       366  (0.02677); expected 273.4 (0.02)
Passed bias filter:                      308  (0.0225278); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.46s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|14489_1  [L=113]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.44s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 552.63
//
Query:       MMETSP1325-20131115|14490_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 565.54
//
Query:       MMETSP1325-20131115|14495_1  [L=187]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.8    7.9   8.4        7.4    6.5   4.5    2.3  2  PF13664.1 Domain of unknown function (DUF4149)


Domain annotation for each model (and alignments):
>> PF13664.1  Domain of unknown function (DUF4149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.5     0.047   6.5e+02      68      88 ..      36      56 ..       4      65 .. 0.64
   2 ?    6.5   4.5   0.00054       7.4      15      80 ..      99     162 ..      37     175 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.3 bits;  conditional E-value: 0.047
    PF13664.1 68 llqlllllvvlllsllnlfyl 88
                 + ++ +ll +++ ++l++fy+
  MMETSP1325-20131115|14495_1 36 SGSFAVLLGAIVYTCLQAFYV 56
                 445555556666666666664 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.00054
    PF13664.1  15 fvvapvlfrsLprhqagelqsklFpvyfglglalsvlllltevankeklaseellqlllllvvlll 80 
                   v a  +  ++  ++ ++l+ ++ ++y+g+ + + + ll+ ++++   l+++++ + ++l+  + +
  MMETSP1325-20131115|14495_1  99 TVGALCMTYAIGTYYVSKLACQMTQAYYGFAMSCVGALLVKSLWSA--LSAHDQYAGIALVGGMGC 162
                  45688888889999*****************************976..666665555555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       570  (0.041691); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.38s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 974.17
//
Query:       MMETSP1325-20131115|14505_1  [L=131]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-20   72.8   0.1    1.9e-20   72.6   0.1    1.1  1  PF04683.8  Proteasome complex subunit Rpn13 ubiquitin receptor
  ------ inclusion threshold ------
      0.041   13.4   0.0      0.051   13.1   0.0    1.2  1  PF00092.23 von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> PF04683.8  Proteasome complex subunit Rpn13 ubiquitin receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.1   2.7e-24   1.9e-20       7      85 .]      18      99 ..       6      99 .. 0.85

  Alignments for each domain:
  == domain 1    score: 72.6 bits;  conditional E-value: 2.7e-24
    PF04683.8  7 gkkvtpdprkGliylvksedgllhfqWrdretr.neveddlilfpgdatfkkvksc.ktgrvyvLkfksssek.yfFWlQek 85
                 + ++++ p kG+++lvk+e g ++fqW+dr ++   ++ + ++fpgda+f kv ++ + +rvy+L+f+s+ ++ +fFWlQ+k
  MMETSP1325-20131115|14505_1 18 RFTISALPSKGQLQLVKDETGIMRFQWKDRVAQvVDEDVNHMVFPGDASFVKVVTGrEGDRVYMLQFSSNANRrFFFWLQDK 99
                 37899***************************85555558899*********99887999**********9999******97 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   7.5e-06     0.051      31      80 ..      71     120 ..      43     127 .. 0.70

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 7.5e-06
                  H.CCTTTEEEEEEEESSSEEEEE-T..CCHHCCSSCGGHH-CCGGSTTS-B- CS
   PF00092.23  31 ldigpdsvrvglvqyssdaktevsl..ndfkskeellsavsknlkylgggtn 80 
                     g++++rv ++q+ss+a+  + +  +d  +k++ +    k ++y+++  +
  MMETSP1325-20131115|14505_1  71 V-TGREGDRVYMLQFSSNANRRFFFwlQDKDDKDDAELTG-KLNEYMNNPEA 120
                  3.59****************66554104444444444444.66666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      391  (0.0285986); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.36s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 682.44
//
Query:       MMETSP1325-20131115|14504_1  [L=232]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       335  (0.0245026); expected 273.4 (0.02)
Passed bias filter:                      292  (0.0213575); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.36s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 1029.55
//
Query:       MMETSP1325-20131115|14496_1  [L=447]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-55  185.5   0.6    9.1e-55  184.7   0.4    1.3  1  PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
    2.5e-31  107.6   0.0    5.9e-31  106.4   0.0    1.7  1  PF00984.14 UDP-glucose/GDP-mannose dehydrogenase family, central domain
    2.1e-29  101.6   0.0    3.9e-28   97.5   0.0    2.4  2  PF03720.10 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
  ------ inclusion threshold ------
      0.025   14.3   0.1       0.16   11.7   0.1    2.2  2  PF03446.10 NAD binding domain of 6-phosphogluconate dehydrogenase
      0.053   13.1   0.6        0.3   10.6   0.2    2.5  2  PF01210.18 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus


Domain annotation for each model (and alignments):
>> PF03721.9  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.7   0.4   3.3e-58   9.1e-55       2     179 ..      10     192 ..       9     199 .. 0.96

  Alignments for each domain:
  == domain 1    score: 184.7 bits;  conditional E-value: 3.3e-58
                  EEEEE------------TTT--..-EEE---S-HHHHHHHH----SS-----HHHHH-------B-----HHHHHHT-SEEEE-----B--.....--B.----HHHHHHH---HHHH--EEEE-S------TTTTHHHHHHHH-----------------TTSHHHHHHS-S-EEE---STT-- CS
    PF03721.9   2 kiaviGlGYvGlptavvlaekg..hevvgvDineekvdklnsgkipiyEpgleellkknveegrlrfttdvkeavkeadvifiavgTpskk.....gkaaDlkyvesaaeeiaevlkkgkvvvvkSTvpvgtteelvkeilekaskkkvdfdvvsnPEflreGkalkdllnpdrvviGveeekae 179
                  ki+++G+GYvG pt++v+a  +  ++v++vDi+e+++ ++ns+++pi Epgl e++k+ +  ++++f+t+++e++++ad+ifi+v+Tp+k+     g+aa++k  e  a++iae+++ +k+vv+kSTvpv+t++  vk++l++  ++ v f+v+snPEfl+eG+a++dl+np+rv+iG+e+++++
  MMETSP1325-20131115|14496_1  10 KICCMGAGYVGGPTMAVIADNCpdIKVTVVDISEKQIGAWNSDDLPIFEPGLLEVVKRVR-GKNMFFSTAIDETIADADIIFISVNTPTKTqgigaGRAANVKNCELCARKIAEIATTNKIVVEKSTVPVRTAH-AVKRVLASSAQEGVTFQVLSNPEFLAEGTAMDDLQNPARVLIGGEQTPEG 192
                  8*********************99**********************************99.8*********************************99************************************9.8999999988888********************************99987 PP

>> PF00984.14  UDP-glucose/GDP-mannose dehydrogenase family, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.4   0.0   2.2e-34   5.9e-31       1      96 []     217     314 ..     217     314 .. 0.97

  Alignments for each domain:
  == domain 1    score: 106.4 bits;  conditional E-value: 2.2e-34
                  HHHHHHHHHHHHHHHHHHHHHHHH---HHHH------HHHHHHTT-TTTTSTT-----------HHHHHHHHHHHHHHTT---S..----HHHHHHHH CS
   PF00984.14   1 lktAEliKlaaNaflatkisfiNelaniaeavgadveevaeavgldprigkkflkpgigfGGsclpkDvlalvkkaeelgleak..lleavvnsneaq 96 
                  l+++El+Kl+aNa la+++s+iN++++++ea++adv+e+++a+g+dprig kfl++++gfGGsc++kD+l+lv+ +e  gl++   ++++v+++ne+q
  MMETSP1325-20131115|14496_1 217 LWSSELSKLVANAVLAQRVSSINSISALCEATDADVSEISRAIGSDPRIGPKFLNASVGFGGSCFQKDILNLVYLCETFGLHECaeYWHQVIKMNEYQ 314
                  589******************************************************************************99889*********976 PP

>> PF03720.10  UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.11     3e+02      51      76 ..      70      95 ..      31     110 .. 0.74
   2 !   97.5   0.0   1.4e-31   3.9e-28       1      98 [.     336     446 ..     336     447 .] 0.98

  Alignments for each domain:
  == domain 1    score: 1.5 bits;  conditional E-value: 0.11
   PF03720.10 51 eknvelvsdleealkgadaivilteh 76
                  kn+ +++ ++e++++ad+i i ++ 
  MMETSP1325-20131115|14496_1 70 GKNMFFSTAIDETIADADIIFISVNT 95
                 5688889999**********998875 PP

  == domain 2    score: 97.5 bits;  conditional E-value: 1.4e-31
   PF03720.10   1 avlGlaFKkntdDlReSpaldiieeLleegaevkiyDPkvkeeaaealle.............eknvelvsdleealkgadaiviltehdefkeldleklkelmkkpavvf 98 
                  av+G+aFKk+t D+Re+++  ++++Llee+a+v++yDPkv+++ + ++l+             e+n+ ++ d+++a++ga+ai ilte+defk+ld++++++ m+kpa++f
  MMETSP1325-20131115|14496_1 336 AVYGFAFKKDTGDTRETASAFVCRDLLEEQAKVHVYDPKVERSVMFMELSytlqvtpesmpglEDNLITSPDAYTAAEGAHAIAILTEWDEFKTLDYQRIYDSMSKPAFLF 446
                  79******************************************999888*************999*****************************************9987 PP

>> PF03446.10  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   5.8e-05      0.16       3     109 ..      10     150 ..       8     161 .. 0.81
   2 ?   -1.2   0.0      0.54   1.5e+03      17      45 ..     358     386 ..     356     397 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 5.8e-05
                  EBEEB-------HHHHHHHH-..--EEEE--SSHHHHHHHHHTT...................EEE-SSHHHHHHHBSEEEE-SSSHHHHHHHHHH..............HCCC-----EEEE-S---HHHHHHHHHHHHH CS
   PF03446.10   3 kigfiGlGvMGspmalnllka..gyevavynrtkekveelvaeg...................akaaesieelvasldvvilmvkagkavdeviege.............llealekgdilidgstsspedtrelakelke 109
                  ki  +G G  G p +  ++++  +++v+v++ +++++ ++ ++                    +   + i e +a++d++++ v+++++++ +  g+             ++e +  ++i+++ st+ ++++ ++++ l++
  MMETSP1325-20131115|14496_1  10 KICCMGAGYVGGPTMAVIADNcpDIKVTVVDISEKQIGAWNSDDlpifepgllevvkrvrgknMFFSTAIDETIADADIIFISVNTPTKTQGIGAGRaanvkncelcarkIAEIATTNKIVVEKSTVPVRTAHAVKRVLAS 150
                  78899999999987777765333899999999999999999998999999999999999998888888999********************99999766555555544445555599**********99999888777665 PP

  == domain 2    score: -1.2 bits;  conditional E-value: 0.54
                  HHHHHH---EEEE--SSHHHHHHHHHTTE CS
   PF03446.10  17 alnllkagyevavynrtkekveelvaega 45 
                  ++ ll+++ +v+vy+ + e+   +++   
  MMETSP1325-20131115|14496_1 358 CRDLLEEQAKVHVYDPKVERSVMFMELSY 386
                  57799999*******99888877777655 PP

>> PF01210.18  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   0.00011       0.3       1      80 [.      10      96 ..      10     176 .. 0.64
   2 ?   -1.6   0.0      0.63   1.7e+03      53      73 ..     398     418 ..     367     422 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00011
                 EEEEE-------HHHHHHHTTE..EEEEEE-S-HHHHHHHHHHTS.....BTTTBTT-B--TTEEEES-HHHHH----CEEE-S-HH CS
   PF01210.18  1 kvavlGaGswGtalAkvlaeng..hevrlWvreeklieeinerre.....nvkylpgiklpenlvattDleealkgadiivlvVPsq 80
                 k++ +GaG +G    +v+a+n+   +v++ + +ek+i + n++          ++   + ++n+ ++t ++e++++adii++ V + 
  MMETSP1325-20131115|14496_1 10 KICCMGAGYVGGPTMAVIADNCpdIKVTVVDISEKQIGAWNSDDLpifepGLLEVVKRVRGKNMFFSTAIDETIADADIIFISVNTP 96
                 7999*******99999******7778888888898888888876422201455566667789********************99543 PP

  == domain 2    score: -1.6 bits;  conditional E-value: 0.63
                  --TTEEEES-HHHHH----CE CS
   PF01210.18  53 lpenlvattDleealkgadii 73 
                  l +nl  ++D  +a++ga  i
  MMETSP1325-20131115|14496_1 398 LEDNLITSPDAYTAAEGAHAI 418
                  789999**********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       401  (0.02933); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.37s 00:00:01.14 Elapsed: 00:00:00.76
# Mc/sec: 1409.44
//
Query:       MMETSP1325-20131115|14514_1  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        92  (0.00672908); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.35s 00:00:00.63 Elapsed: 00:00:00.56
# Mc/sec: 226.80
//
Query:       MMETSP1325-20131115|14514_2  [L=53]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       167  (0.0122147); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.51
# Mc/sec: 249.03
//
Query:       MMETSP1325-20131115|14515_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-09   36.5   0.0    1.8e-09   36.5   0.0    1.0  1  PF10459.4 Peptidase S46


Domain annotation for each model (and alignments):
>> PF10459.4  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   0.0   1.3e-13   1.8e-09     133     184 ..       6      62 .]       1      62 [] 0.78

  Alignments for each domain:
  == domain 1    score: 36.5 bits;  conditional E-value: 1.3e-13
    PF10459.4 133 eaelkklakeceeed.....glrcevasfygGneYylikykeykDVRLVyaPpssig 184
                  +++++++a + e+++     ++rcev+++   ++Y+l++y++++DVRLVy Pp  +g
  MMETSP1325-20131115|14515_1   6 RNRRQEIARAAEAASdqpasSVRCEVQEMWPDKTYVLFTYERLRDVRLVYVPPMTLG 62 
                  455555555544444455679********************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.52
# Mc/sec: 285.72
//
Query:       MMETSP1325-20131115|14521_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       533  (0.0389848); expected 273.4 (0.02)
Passed bias filter:                      456  (0.0333528); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.56
# Mc/sec: 273.27
//
Query:       MMETSP1325-20131115|14537_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        99  (0.00724108); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|14534_1  [L=210]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-46  156.1   0.0    6.5e-46  155.8   0.0    1.1  1  PF00406.17 Adenylate kinase
    1.1e-13   50.4   0.0    1.9e-13   49.6   0.0    1.4  1  PF05191.9  Adenylate kinase, active site lid
    4.4e-06   27.3   0.1    1.2e-05   25.9   0.1    1.8  1  PF13207.1  AAA domain
    0.00024   21.2   0.0    0.00046   20.3   0.0    1.6  1  PF13238.1  AAA domain
    0.00078   19.2   0.0      0.002   17.8   0.0    1.6  1  PF13671.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00406.17  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.8   0.0   2.4e-49   6.5e-46       2     150 ..       1     179 [.       1     180 [. 0.98

  Alignments for each domain:
  == domain 1    score: 155.8 bits;  conditional E-value: 2.4e-49
                  E--TT-----HHHHHHHHCS-EEEE---HHHHHHHCT-----HHHHHHHTT----HHHHHHHHHHHHHSHCGH-EEEEE----SHHHHHHHHHHHHCTT-EESEEEEEE--HHHHHHHHHH....................................GSHHHHHHHHHHHHHHHHHHHHHHHHTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00406.17   2 lGaPgaGKGtqaeklvkkyglvhlstGdllRaevksgtelGkeakevmdkgelvpdevvvklvkerleqkdkkkgflldgfPRtveqaealeelleeekvkldlvleldvpeevlveRllk....................................DneetvkkRletykkqtepvidyykkkg 150
                  +G+Pg GKGt ++k+ +++++ hlstGd+lR++v++ t++G eak++md+g+lvpde++v+lv +++e+k   ++ lldgfPRt +qa +l +     ++k+d+ l+ldvp e++veR+++                                    D++++v++Rl+ty k t+p+i+yy+++g
  MMETSP1325-20131115|14534_1   1 MGPPGGGKGTISKKILRDFSFSHLSTGDVLRENVRNATPVGVEAKSYMDAGDLVPDELMVRLVLSEVEEK-GYNRLLLDGFPRTEAQAVELGK-----HIKVDMALNLDVPTETIVERISNrwlhpasgrvyaydynppkvegkddetgedliqrddDKADAVRTRLATYDKLTAPLIEYYRTEG 179
                  8*******************************************************************88.8899*****************9.....99*********************************************************************************9987 PP

>> PF05191.9  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.0     7e-17   1.9e-13       1      36 []     116     151 ..     116     151 .. 0.99

  Alignments for each domain:
  == domain 1    score: 49.6 bits;  conditional E-value: 7e-17
                  -EEES----EEBTTTB--S-----S-----EE--TT CS
    PF05191.9   1 RrvCpdCGrvYhikfnpPkvdgvCDkCgepLiqRkD 36 
                  R+ +p++GrvY  ++npPkv+g++D++ge+LiqR+D
  MMETSP1325-20131115|14534_1 116 RWLHPASGRVYAYDYNPPKVEGKDDETGEDLIQRDD 151
                  9**********************************9 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.1   4.3e-09   1.2e-05       6     110 ..       2     116 ..       1     202 [. 0.69

  Alignments for each domain:
  == domain 1    score: 25.9 bits;  conditional E-value: 4.3e-09
                  --TT---HHHHHHHHHHSTEEEEEGGGB--GGGS-B-----B.--SSGGGB-HHHHHHHH............H..HHHHHH.....TTS-----.------EEEEE----TTGGTTT-SS CS
    PF13207.1   6 GppGsGKsTlakeLaerlglpvlslddllreeglkelddger.eskdadadllaaildglaa........kkdtlswvidg.....aleseldl.rleeadeiiyldaplpecrkrllkr 110
                  GppG GK T++k++ + + + +ls++d+lre   + ++ g++ +s+    dl+ ++   l++        +k++  +++dg     a  + ++l +   +d ++ ld p +   +r+  r
  MMETSP1325-20131115|14534_1   2 GPPGGGKGTISKKILRDFSFSHLSTGDVLRENVRNATPVGVEaKSYMDAGDLVPDE---LMVrlvlseveEKGYNRLLLDGfprteA--QAVELgKHIKVDMALNLDVPTETIVERISNR 116
                  9**************************43555555887777655555555555555...2222334556688999999999654320..2223322223333333333332233333333 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.7e-07   0.00046       5     112 ..       2     116 ..       1     141 [. 0.85

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.7e-07
    PF13238.1   5 GtpGvGKtTlakeLaerl.......gdvlrdlakengleeevddkidtkeskeldedkldelldkleeneselaegenviidghlaeleledlkdlkl.....vvLradpeelarRlekR 112
                  G+pG GK T++k++ + +       gdvlr+++ +   +    + ++ +   + de ++  +l+++ee+      ++++++dg+++          ++       L+++ e+  +R+++R
  MMETSP1325-20131115|14534_1   2 GPPGGGKGTISKKILRDFsfshlstGDVLRENVRNATPVGVEAKSYMDAGDLVPDELMVRLVLSEVEEK-----GYNRLLLDGFPRTEAQAVELGKHIkvdmaLNLDVPTETIVERISNR 116
                  9*************99988898999********999999999988777777777777777777777775.....57**********99766554444488*****************998 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   7.4e-07     0.002       6     121 ..       2     119 ..       1     128 [. 0.75

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 7.4e-07
    PF13671.1   6 GlpGsGKstlaerllkklgyvrlsq.dtlrkrlfg...tdqq.sktdytrvlkrlyq..ilnklarkalsagrsvivdatnlsreerarfvklakrlgvpvrivylevpeetlreRlakRern 121
                  G+pG GK t ++++l++  + +ls+ d+lr+ +++          ++y ++ + + +  +++ ++ ++ ++g++ ++  ++  +++ a+ v+l k+++v+  ++ l+vp et+ eR+  R  +
  MMETSP1325-20131115|14534_1   2 GPPGGGKGTISKKILRDFSFSHLSTgDVLRENVRNatpV--GvEAKSYMDAGDLVPDelMVRLVLSEVEEKGYNRLLLDGF--PRTEAQAVELGKHIKVD-MALNLDVPTETIVERISNRWLH 119
                  9******************99998735667788775431..1344468888888777434455677777777774444444..5677899*******966.899*************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       375  (0.0274283); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.39s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 986.74
//
Query:       MMETSP1325-20131115|14539_1  [L=115]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00016   22.0   0.0    0.00028   21.2   0.0    1.4  1  PF13640.1 2OG-Fe(II) oxygenase superfamily
  ------ inclusion threshold ------
       0.11   11.7   0.0       0.16   11.1   0.0    1.4  1  PF09859.4 Uncharacterized protein conserved in bacteria (DUF2086)
       0.35   10.5   1.7       0.88    9.2   0.8    1.9  2  PF06773.6 Bim protein N-terminus


Domain annotation for each model (and alignments):
>> PF13640.1  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   6.2e-08   0.00028      26      99 ..       2      67 ..       1      68 [. 0.92

  Alignments for each domain:
  == domain 1    score: 21.2 bits;  conditional E-value: 6.2e-08
    PF13640.1 26 ltlllylndpeweeeGGelelypsdrsegvakevedeevvpkpgrlvlFksdrslHrvtpvgaqgrrlaitgwf 99
                 +tl l+ln p++++ G  l++++++ +++++++v+      k+g  ++ k+  +lH++ p+ ++g+r  +++w+
  MMETSP1325-20131115|14539_1  2 ITLNLNLNMPSEDFVGSSLVFVDEH-NASKTHTVD-----FKAGHSIIHKG-SLLHSALPI-ERGERQNLIVWL 67
                 7999******************999.9999*****.....****9999999.9********.999998888886 PP

>> PF09859.4  Uncharacterized protein conserved in bacteria (DUF2086)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.5e-05      0.16      93     133 ..       6      44 ..       2      66 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 3.5e-05
    PF09859.4  93 ilLsepgedftGGefvlteqrpraqsraevvplkqGdalif 133
                  ++L++p edf G  +v+++++  + s+++ v  k G+ +i 
  MMETSP1325-20131115|14539_1   6 LNLNMPSEDFVGSSLVFVDEH--NASKTHTVDFKAGHSIIH 44 
                  689***************875..5789999******99985 PP

>> PF06773.6  Bim protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.74   3.4e+03      15      22 ..      83      90 ..      80      91 .. 0.78
   2 ?    9.2   0.8   0.00019      0.88       4      15 ..     104     115 .]     102     115 .] 0.95

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 0.74
    PF06773.6 15 GQLQsaeR 22
                  Q+ +aeR
  MMETSP1325-20131115|14539_1 83 EQMTPAER 90
                 59999999 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00019
    PF06773.6   4 vlSsdCdsGEGG 15 
                  v+S+ C+sG+GG
  MMETSP1325-20131115|14539_1 104 VVSPVCNSGDGG 115
                  8**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      187  (0.0136776); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 562.41
//
Query:       MMETSP1325-20131115|14544_1  [L=56]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-13   49.7   0.0    1.6e-11   43.4   0.0    2.0  2  PF00400.27 WD domain, G-beta repeat
     0.0032   15.6   0.0     0.0032   15.6   0.0    1.0  1  PF11715.3  Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> PF00400.27  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.0   2.4e-15   1.6e-11       4      39 .]       4      39 ..       1      39 [. 0.95
   2 !    4.7   0.0     0.004        28       1      13 [.      43      55 ..      43      55 .. 0.89

  Alignments for each domain:
  == domain 1    score: 43.4 bits;  conditional E-value: 2.4e-15
                 EEEEESSSSSEEEEEEESSSTEEEEEETTSEEEEEE CS
   PF00400.27  4 katlrgHtspVtcvafspdgpllasgSrDgtirlWd 39
                 + tl+gHts V c  f+p +++l++gS D +++lWd
  MMETSP1325-20131115|14544_1  4 VLTLEGHTSYVFCANFNPQSNMLVTGSFDENVKLWD 39
                 789********************************9 PP

  == domain 2    score: 4.7 bits;  conditional E-value: 0.004
                 TEEEEEEESSSSS CS
   PF00400.27  1 geckatlrgHtsp 13
                 g+c++tl +H++p
  MMETSP1325-20131115|14544_1 43 GTCIKTLPAHSDP 55
                 68********985 PP

>> PF11715.3  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   4.6e-07    0.0032     230     256 ..      22      48 ..      10      54 .. 0.87

  Alignments for each domain:
  == domain 1    score: 15.6 bits;  conditional E-value: 4.6e-07
    PF11715.3 230 gqtfvftlsrDgkLRvWnletgqclrt 256
                  ++++++t s D ++++W+++tg+c++t
  MMETSP1325-20131115|14544_1  22 QSNMLVTGSFDENVKLWDVRTGTCIKT 48 
                  6899********************887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 285.52
//
Query:       MMETSP1325-20131115|14551_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       497  (0.0363517); expected 273.4 (0.02)
Passed bias filter:                      435  (0.0318169); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|14554_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       549  (0.0401551); expected 273.4 (0.02)
Passed bias filter:                      322  (0.0235518); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.35s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 703.61
//
Query:       MMETSP1325-20131115|14555_1  [L=208]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-24   84.5   0.1    6.1e-24   84.1   0.0    1.1  1  PF00241.15 Cofilin/tropomyosin-type actin-binding protein


Domain annotation for each model (and alignments):
>> PF00241.15  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.1   0.0   4.5e-28   6.1e-24       2     113 ..      27     140 ..      26     151 .. 0.90

  Alignments for each domain:
  == domain 1    score: 84.1 bits;  conditional E-value: 4.5e-28
                  CHHHCCCCHCC---ECEEEEEE-TTSSSEEEEEE.E-S-HCCCCCCTS-TTS-EEEEEEEEEEBS.S-EEEEEEEEEE--TTS-HHHCHHHHHCCHHHHHHH--.--EEEEES- CS
   PF00241.15   2 elkesfqelkkrkkkryiifkidknkkkivveqvgetgdsydelveelkerecrYavldveytee.eskkskivfvswcpdgApvkkkmlyASskdalkkslkg.ikvevqatd 113
                  ++  +f++lk r+k+++iifkid + ++ivve++g ++++++e++  l+ +ecrY v++ ey+++ +   +k++f+sw p +A +  km+yA  k  ++  l+g  +++  + d
  MMETSP1325-20131115|14555_1  27 DCYPTFEQLKIRRKHKFIIFKIDTETEEIVVETTGAKKATLEEFKAALPYTECRYCVYEHEYKTHdGRPTDKLFFMSWMPNNATPYGKMAYAEAKGVIRALLDGvFDTSASNLD 140
                  78889*********************************************************99867889********************************995555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       430  (0.0314511); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.38s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 958.54
//
Query:       MMETSP1325-20131115|14562_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      268  (0.0196021); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 234.94
//
Query:       MMETSP1325-20131115|14559_1  [L=191]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.69    7.8   4.6       0.77    7.7   3.2    1.1  1  PF05053.8 Menin


Domain annotation for each model (and alignments):
>> PF05053.8  Menin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.2   5.6e-05      0.77     503     544 ..       4      46 ..       1      81 [. 0.70

  Alignments for each domain:
  == domain 1    score: 7.7 bits;  conditional E-value: 5.6e-05
    PF05053.8 503 pannknsnskknane.gadkkeaaatagkaattengssasvql 544
                  ++nn+n+n+++n+n+ + +k    +++g+a tt+ng  +s+ +
  MMETSP1325-20131115|14559_1   4 NNNNNNNNNNNNNNSvNHTKAIHNSARGRALTTNNGHYTSSAA 46 
                  23333334444444457778888999*********98777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       549  (0.0401551); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.40s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 915.41
//
Query:       MMETSP1325-20131115|14566_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       294  (0.0215038); expected 273.4 (0.02)
Passed bias filter:                      230  (0.0168227); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 284.01
//
Query:       MMETSP1325-20131115|14563_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-05   23.5   0.1    7.3e-05   22.9   0.1    1.3  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.1   5.4e-09   7.3e-05      83     155 ..      30     108 ..       3     109 .. 0.60

  Alignments for each domain:
  == domain 1    score: 22.9 bits;  conditional E-value: 5.4e-09
                  THHHH---HHHHHHHHTT---------------..------.........--------------STTT----TTTTT------- CS
   PF00504.16  83 qillligflelareqelkapesegsekraypGg..lgfdpl.........glakdeeekaelklkEiknGRlAMiaflgfvvqa 155
                  +  +++  l ++r+++++a+   +   ra p    +              ++++++  + +  ++E++nGR AM++f+ +++q+
  MMETSP1325-20131115|14563_1  30 VSATAFTPLTVRRSTSVVATRRAA-APRAAPAMflP----SlkpqedfvwNINEQRGPFGFADNAEVWNGRVAMMSFFWLYIQE 108
                  444444455555555555544433.23333443220....11222333234457888888999*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       518  (0.0378877); expected 273.4 (0.02)
Passed bias filter:                      328  (0.0239906); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 851.47
//
Query:       MMETSP1325-20131115|14567_1  [L=159]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       365  (0.0266969); expected 273.4 (0.02)
Passed bias filter:                      304  (0.0222352); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 793.79
//
Query:       MMETSP1325-20131115|14571_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       231  (0.0168958); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 543.17
//
Query:       MMETSP1325-20131115|14572_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      122  (0.00892335); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 469.87
//
Query:       MMETSP1325-20131115|14573_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   14.3   0.4      0.016   14.3   0.3    1.9  2  PF13297.1 Telomere stability C-terminal


Domain annotation for each model (and alignments):
>> PF13297.1  Telomere stability C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.3   1.2e-06     0.016      19      40 ..      32      53 ..       9      54 .. 0.88
   2 ?   -2.8   0.0      0.26   3.5e+03      16      37 ..      60      63 ..      57      65 .] 0.50

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 1.2e-06
    PF13297.1 19 rLKeaLaalGLKcGGtlqeRAa 40
                  + ea + lG+ c Gtl+eRA+
  MMETSP1325-20131115|14573_1 32 IVNEAVETLGMECKGTLKERAN 53
                 56678999************95 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.26
    PF13297.1 16 gldrLKeaLaalGLKcGGtlqe 37
                 gl+                  e
  MMETSP1325-20131115|14573_1 60 GLE------------------E 63
                 544..................4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       265  (0.0193827); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 331.41
//
Query:       MMETSP1325-20131115|14575_1  [L=41]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (41 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 200.51
//
Query:       MMETSP1325-20131115|14576_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       173  (0.0126536); expected 273.4 (0.02)
Passed bias filter:                      149  (0.0108982); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 377.20
//
Query:       MMETSP1325-20131115|14583_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       106  (0.00775307); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 226.32
//
Query:       MMETSP1325-20131115|14587_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.8   0.0       0.22   11.8   0.0    1.4  1  PF13865.1 C-terminal duplication domain of Friend of PRMT1


Domain annotation for each model (and alignments):
>> PF13865.1  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.6e-05      0.22      61      74 ..      10      23 ..       5      26 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1.6e-05
    PF13865.1 61 kLDaeLdaYmkkke 74
                  +D+eLd+Y+++k 
  MMETSP1325-20131115|14587_1 10 AMDNELDSYWAAKP 23
                 58999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       188  (0.0137507); expected 273.4 (0.02)
Passed bias filter:                      163  (0.0119222); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.34s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 489.47
//
Query:       MMETSP1325-20131115|14594_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       111  (0.00811878); expected 273.4 (0.02)
Passed bias filter:                      105  (0.00767993); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 297.33
//
Query:       MMETSP1325-20131115|14593_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 430.37
//
Query:       MMETSP1325-20131115|14598_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.6   0.0        0.2   10.8   0.0    1.4  1  PF10435.4 Beta-galactosidase, domain 2


Domain annotation for each model (and alignments):
>> PF10435.4  Beta-galactosidase, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   1.4e-05       0.2      29      77 ..      90     140 ..      81     143 .. 0.77

  Alignments for each domain:
  == domain 1    score: 10.8 bits;  conditional E-value: 1.4e-05
                  TTS-EEEEEEESSTT--S-E.EEEEEE------EEEEEE--EEE.E----E CS
    PF10435.4  29 dtkasFyvvrhadsssqast.sfklkvntsaGnltvPqlggslt.LnGrdS 77 
                  + +++  vv  a+++s +++ + ++k++tsaG+l + ++++++  L+ r++
  MMETSP1325-20131115|14598_1  90 KPGGAVLVVGLAYKPSLTREdTIRIKLETSAGDLVISDQKNKIAiLSRRQA 140
                  556777888888999987652789**************9997652566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       297  (0.0217232); expected 273.4 (0.02)
Passed bias filter:                      286  (0.0209187); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 690.71
//
Query:       MMETSP1325-20131115|14602_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.40s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 350.24
//
Query:       MMETSP1325-20131115|14607_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       300  (0.0219427); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 244.16
//
Query:       MMETSP1325-20131115|14610_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.59
# Mc/sec: 320.87
//
Query:       MMETSP1325-20131115|14609_1  [L=178]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      354  (0.0258923); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.37s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 870.51
//
Query:       MMETSP1325-20131115|14613_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|14618_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.25   10.0   2.2       0.26    9.9   1.5    1.0  1  PF04684.8 BAF1 / ABF1 chromatin reorganising factor


Domain annotation for each model (and alignments):
>> PF04684.8  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.5   1.9e-05      0.26      92     116 ..      33      57 ..      13      68 .. 0.82

  Alignments for each domain:
  == domain 1    score: 9.9 bits;  conditional E-value: 1.9e-05
    PF04684.8  92 vlvgdegssssgsnlhahhhhhhqn 116
                  +++ d  ss+s  ++h hh hhhq+
  MMETSP1325-20131115|14618_1  33 GAAADPASSHSSVEMHQHHDHHHQQ 57 
                  56778999999999***99999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      215  (0.0157256); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.41s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 387.10
//
Query:       MMETSP1325-20131115|14624_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       230  (0.0168227); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 220.07
//
Query:       MMETSP1325-20131115|14626_1  [L=52]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       430  (0.0314511); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.41s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 218.62
//
Query:       MMETSP1325-20131115|14628_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-05   25.0   0.0    1.1e-05   24.9   0.0    1.0  1  PF13621.1 Cupin-like domain


Domain annotation for each model (and alignments):
>> PF13621.1  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   8.1e-10   1.1e-05     150     222 ..       2      77 ..       1      78 [] 0.83

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 8.1e-10
    PF13621.1 150 yeNlycvvsGrKrftLfppsdapklyva..slee.sgtsvssvdvenpdlekfprfkdakalevelepGevLYlPa 222
                  +e +++++ G Kr + +pp++ +kly+   sl++ +gt+v +       ++ fp +++a+ +e e ++G+++Y+Pa
  MMETSP1325-20131115|14628_1   2 VESFHVLLDGAKRTVHWPPTEREKLYPLmrSLSDeTGTEVFMAEGVHRRFDLFPAMAHAEGWEGEFKAGDAIYVPA 77 
                  58899*********************985533335666665666556678999**********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.30u 0.42s 00:00:00.72 Elapsed: 00:00:00.53
# Mc/sec: 352.67
//
Query:       MMETSP1325-20131115|14635_1  [L=61]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       165  (0.0120685); expected 273.4 (0.02)
Passed bias filter:                      161  (0.0117759); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.41s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 292.36
//
Query:       MMETSP1325-20131115|14630_1  [L=336]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-32  110.5   0.0    6.8e-32  109.9   0.0    1.2  1  PF00071.17 Ras family
    4.6e-17   61.5   0.0    1.4e-16   60.0   0.0    1.9  1  PF04564.10 U-box domain
    7.7e-13   48.8   0.0    1.6e-12   47.8   0.0    1.5  1  PF08477.8  Miro-like protein
    2.3e-09   36.5   0.0    3.5e-09   36.0   0.0    1.2  1  PF00025.16 ADP-ribosylation factor family
    7.6e-07   28.4   0.0      2e-06   27.0   0.0    1.7  2  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
    7.7e-06   25.2   0.0    1.6e-05   24.2   0.0    1.5  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    0.00044   20.1   0.0    0.00095   19.0   0.0    1.6  1  PF01926.18 50S ribosome-binding GTPase
     0.0022   18.2   0.0     0.0041   17.4   0.0    1.5  1  PF13191.1  AAA ATPase domain
     0.0039   16.3   0.0     0.0059   15.7   0.0    1.2  1  PF09439.5  Signal recognition particle receptor beta subunit
     0.0045   16.0   0.0     0.0081   15.2   0.0    1.4  1  PF03193.11 Protein of unknown function, DUF258
     0.0052   16.1   0.0      0.064   12.5   0.0    2.1  1  PF00009.22 Elongation factor Tu GTP binding domain
     0.0075   14.8   0.0        1.5    7.3   0.0    2.5  3  PF00503.15 G-protein alpha subunit
     0.0093   15.0   0.0      0.013   14.5   0.0    1.2  1  PF04670.7  Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.018   14.4   0.0      0.042   13.2   0.0    1.6  1  PF13555.1  P-loop containing region of AAA domain
      0.018   14.3   0.0      0.031   13.5   0.0    1.3  1  PF01695.12 IstB-like ATP binding protein
      0.071   12.5   0.0       0.12   11.8   0.0    1.3  1  PF13479.1  AAA domain
        0.1   12.0   1.2        8.7    5.6   0.2    2.5  3  PF03029.12 Conserved hypothetical ATP binding protein


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9   0.0   8.5e-35   6.8e-32       2     158 ..     153     311 ..     152     315 .. 0.96

  Alignments for each domain:
  == domain 1    score: 109.9 bits;  conditional E-value: 8.5e-35
                  EEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHHHHHHHHHHHST.TTSSEEEE---TTGGGG-SS-HHHHHHHHHHTT.EEE---BTTTTTTHHHHHHHHHH CS
   PF00071.17   2 lvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvkkwveeikrvae.envpivLvGnKvDleekravsteegeelakelg.lkfletSAktnenveeafeellr 158
                  l++vG  +vGK+sll+    ++F+e+ e+T gvdf +++      +++ +i+DT Gq + k   ++ yr++++++ v+d+t+r+++ +++ +++  k+ +  +  +++L+GnK+D+ e+r+v+ +e+ e+   +g   + e+SAk+  nv+ +f ++l+
  MMETSP1325-20131115|14630_1 153 LLIVGPAGVGKSSLLTIMRGGEFSEKTEATYGVDFSQHHYISGADQCRATIYDTSGQPHLKDTVRTQYRGTDCVMFVFDVTRRQTLLDLALYIDAAKTEMAgRPHELILLGNKIDIFESREVTSDEAYEFVTTHGlNDYREVSAKSGANVNLTFRNALT 311
                  789*******************************************************************************************99988877889******************************789****************99876 PP

>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.0   1.8e-19   1.4e-16       3      70 ..      55     121 ..      54     125 .. 0.97

  Alignments for each domain:
  == domain 1    score: 60.0 bits;  conditional E-value: 1.8e-19
                  GGGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHH CS
   PF04564.10   3 defldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKekIdkflee 70 
                  d f +p+tl  m dPv + +g+t++rs+ie++l   + t+P+t  +l+++ lipn +l+++I+++l++
  MMETSP1325-20131115|14630_1  55 DSFNCPLTLNRMVDPVSTVDGHTYERSAIEEWLAD-HDTSPMTGLTLESKVLIPNNALRQAIEEYLSN 121
                  78*********************************.*****************************986 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.0     2e-15   1.6e-12       2     119 .]     153     267 ..     152     267 .. 0.88

  Alignments for each domain:
  == domain 1    score: 47.8 bits;  conditional E-value: 2e-15
    PF08477.8   2 vvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavk...tlevdvdtel.lelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                  +++vG  gvGKssll  + g+ef+      e +++t++v+     ++ ++++    + d++g++ lk +     + +d +++v+d+t++++l ++  +++  +   + g+   +il+gnk+D
  MMETSP1325-20131115|14630_1 153 LLIVGPAGVGKSSLLTIMRGGEFS------EKTEATYGVDfsqHHYISGADQCrATIYDTSGQPHLKDTVRTQYRGTDCVMFVFDVTRRQTLLDLALYIDAAKTEMA-GRPHELILLGNKID 267
                  689*********************......888888888844345555555559999************9999*************************988888775.78899*******98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   4.4e-12   3.5e-09      11     146 ..     147     289 ..     140     310 .. 0.86

  Alignments for each domain:
  == domain 1    score: 36.0 bits;  conditional E-value: 4.4e-12
                  .TSEEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S-EEEEEEE....TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT-..--HHHHHHHTTTTTST CS
   PF00025.16  11 kkkelrilllGLDnaGKtTilkklkleelvt.tvPTigfnveelei....knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpea..lseeelrellgleelk 146
                   +k + +l++G  + GK+ +l+ ++ +e+++ t  T g +  + ++     + + t++D  Gq +l+   ++ ++ td v+fv D++ r+ l +    ++a  +e   +   l++l+NK+D+ e+  ++++e  e ++ + l+
  MMETSP1325-20131115|14630_1 147 IDKRVNLLIVGPAGVGKSSLLTIMRGGEFSEkTEATYGVDFSQHHYisgaDQCRATIYDTSGQPHLKDTVRTQYRGTDCVMFVFDVTRRQTLLDLALYIDAAKTEMAGRPHELILLGNKIDIFESreVTSDEAYEFVTTHGLN 289
                  47999***********************9875889***999888887777899************************************************99999999************9876114555666666555555 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   2.5e-09     2e-06       8      46 ..      53      90 ..      46      99 .. 0.81
   2 ?   -3.0   0.0       5.9   4.7e+03      36      46 ..     112     122 ..     112     126 .. 0.77

  Alignments for each domain:
  == domain 1    score: 27.0 bits;  conditional E-value: 2.5e-09
                 XXXX-B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT CS
    PF11789.3  8 erislkCpltlkpfkePvtskkCnHvFEkeaIlkmlkrk 46
                 +  s +Cpltl+ + +Pv+ +   H++E++aI++ l  +
  MMETSP1325-20131115|14630_1 53 KHDSFNCPLTLNRMVDPVS-TVDGHTYERSAIEEWLADH 90
                 556899***********95.6779**********99544 PP

  == domain 2    score: -3.0 bits;  conditional E-value: 5.9
                  HHHHHHHHTTT CS
    PF11789.3  36 keaIlkmlkrk 46 
                  ++aI+++l+++
  MMETSP1325-20131115|14630_1 112 RQAIEEYLSNE 122
                  689****9665 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0     2e-08   1.6e-05       6      45 ..      52      88 ..      47      98 .. 0.88

  Alignments for each domain:
  == domain 1    score: 24.2 bits;  conditional E-value: 2e-08
                 XXXXX-B-TTT-S.-SS....EEEES---EEEHHHHHHHHH CS
    PF13445.1  6 hfhsifaCpiske.qsteqnpPvvLpCGhvisrealeklak 45
                   h +f Cp +   + +    Pv    Gh+++r a+e+++ 
  MMETSP1325-20131115|14630_1 52 EKHDSFNCPLTLNrMVD----PVSTVDGHTYERSAIEEWLA 88
                 679************88....******************98 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.2e-06   0.00095       2      91 ..     153     236 ..     152     266 .. 0.64

  Alignments for each domain:
  == domain 1    score: 19.0 bits;  conditional E-value: 1.2e-06
                  EEEE--TT---HHHHHHHHCST.CTEETS-TT-SSSESEEEE..ETTE..EEEEE---SSSHHHHHHHHHHHHHHHHHHCTSSEEEEEEETTSHH CS
   PF01926.18   2 vaivGrpNvGKStLinaLtgek.aakvsdypgtTrditenev..kkek..iilvDtPGiiegasedkeiegikkylekveradvlllvvdasavl 91 
                  + ivG   vGKS+L+  + g +   k++++ g+  +   +++    ++   +++Dt G   + + +      + +  + + +d +++v+d+++++
  MMETSP1325-20131115|14630_1 153 LLIVGPAGVGKSSLLTIMRGGEfSEKTEATYGVDFSQ--HHYisGADQcrATIYDTSGQ--P-HLK------DTVRTQYRGTDCVMFVFDVTRRQ 236
                  579*************999754445555555555555..2222322334479******3..2.222......33567779**********66533 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   5.1e-06    0.0041      25      42 ..     152     169 ..     134     215 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 5.1e-06
    PF13191.1  25 lllvtGpsGiGKSsLlre 42 
                  +ll++Gp+G+GKSsLl+ 
  MMETSP1325-20131115|14630_1 152 NLLIVGPAGVGKSSLLTI 169
                  89*************964 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   7.3e-06    0.0059       3     129 ..     150     273 ..     148     278 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 7.3e-06
                  --EEEEE--TT---HHHHHHHHHSS-.------SS-EEETT-.....-----EEEE----GGGGHHHHHHHHHHGGB---EEEEETTS-TT--HHHHHHHHHHHHHHHHH-----EEEEEE-TTSTT--- CS
    PF09439.5   3 kpavllvGlsdsGKTslftrLttdsv.kktvtSqessaalkv..ksekgkkltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeilliteklknavdiliACnKqelflaks 129
                  + ++l+vG+   GK sl+t +  +++ +kt +     ++++   ++ ++ + t+ D  G+ +l+  + ++    +    ++fv D t   + + + A ++     +te++    ++++  nK ++f +++
  MMETSP1325-20131115|14630_1 150 RVNLLIVGPAGVGKSSLLTIMRGGEFsEKTEATYGVDFSQHHyiSGADQCRATIYDTSGQPHLKDTVRTQ---YRGTDCVMFVFDVTRR-QTLLDLALYIDA--AKTEMAGRPHELILLGNKIDIFESRE 273
                  55789****************999551456666644444333249999****************999888...56788999****9865.567788866554..44444555666777788888888875 PP

>> PF03193.11  Protein of unknown function, DUF258
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     1e-05    0.0081      33      59 ..     147     174 ..     116     211 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1e-05
                  CTTSB.EEEE-------HHHHHHH---- CS
   PF03193.11  33 lkdkt.svlvGqSGvGKSsLinallpel 59 
                  +++++  ++vG++GvGKSsL+ ++++ +
  MMETSP1325-20131115|14630_1 147 IDKRVnLLIVGPAGVGKSSLLTIMRGGE 174
                  5554414689***********9998754 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   7.9e-05     0.064      66     176 ..     195     303 ..     148     316 .. 0.68

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.9e-05
                  .ESCEEEEEEE----GGGHHHHHHHHHT-SEEEEEEETTS-.S-HHHHHHHHHHHHTT--....EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTGCTCGEEEEEE-STCCHHHH CS
   PF00009.22  66 etkkrlinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqTeevlrlakklgvk....iivviNKiDrveaeleeiveelkekllekylekgeeevpvvpgSalkgegid 176
                    ++ + ++ Dt G     ++v +  r +D+++ v+d++           + +ak++       +i++ NKiD  e++  e+ ++  ++++++++ ++        +Sa++g +++
  MMETSP1325-20131115|14630_1 195 GADQCRATIYDTSGQPHLKDTVRTQYRGTDCVMFVFDVTRRqTLLDLALYIDAAKTEMAGrpheLILLGNKIDIFESR--EVTSDEAYEFVTTHGLND-----YREVSAKSGANVN 303
                  47889999******************************977433333444444444433244789********88554..555555557878877775.....5667777777665 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0018       1.5      50      89 ..     142     178 ..      34     199 .. 0.74
   2 ?   -0.8   0.0      0.51   4.1e+02     222     256 ..     190     230 ..     177     233 .. 0.78
   3 ?    4.6   0.0     0.012       9.9     294     333 ..     258     294 ..     242     309 .. 0.81

  Alignments for each domain:
  == domain 1    score: 7.3 bits;  conditional E-value: 0.0018
                  XXXXXXXXEEEEEEEXXXXXXXHHHHHHHHHHHXXXXXXX CS
   PF00503.15  50 eekkkkkkevklLlLGqgeSGKsTilkqfkllykpgfsre 89 
                    ++  +k+v+lL++G ++ GKs +l    ++ +++fs++
  MMETSP1325-20131115|14630_1 142 PPNTMIDKRVNLLIVGPAGVGKSSLLT---IMRGGEFSEK 178
                  4478888******************97...5566666644 PP

  == domain 2    score: -0.8 bits;  conditional E-value: 0.51
                  .......XXXEEEEEEXXXXGGGGGGTGGGXXXXXEEEEEE CS
   PF00503.15 222 e......sktefrlvDvGGqrserkkWipcfedvdaiiFlv 256
                  +      ++ +  ++D++Gq   + +    + ++d+++F+ 
  MMETSP1325-20131115|14630_1 190 HhyisgaDQCRATIYDTSGQPHLKDTVRTQYRGTDCVMFVF 230
                  1333456788899*******999999999999999999996 PP

  == domain 3    score: 4.6 bits;  conditional E-value: 0.012
                  EEEEEEEXHHHHHHHTTTSXGGSGGGTTXXXX..HHHHHH CS
   PF00503.15 294 piiLflNKlDileeKlkkgpklskyfpsyegdrendyesa 333
                  ++iL+ NK+Di+e++  ++ +  ++++   g   ndy+++
  MMETSP1325-20131115|14630_1 258 ELILLGNKIDIFESREVTSDEAYEFVTTH-GL--NDYREV 294
                  689**********9877766566666666.66..677665 PP

>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.6e-05     0.013       2     106 ..     153     252 ..     152     312 .. 0.76

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.6e-05
    PF04670.7   2 lLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrf.lgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileall 106
                  lL++G+ g GK+S+  i+       + ++ +  +d +q+h+    ++    + D+ Gq ++ ++       + ++  + +++VfD++ r+   dl+ + ++ +  +
  MMETSP1325-20131115|14630_1 153 LLIVGPAGVGKSSLLTIMR-GGEFSEKTEATYGVDFSQHHYISgADQCRATIYDTSGQPHLKDT-----VRTQYRGTDCVMFVFDVTRRQTLLDLALYIDAAKTEM 252
                  89***********987665.555555556667777777776432567899********888777.....47889999**********8887777777766665544 PP

>> PF13555.1  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   5.2e-05     0.042      19      40 ..     147     167 ..     142     179 .. 0.83

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 5.2e-05
    PF13555.1  19 idpkgkntlltGasGsGKSTll 40 
                  id++  n l++G+ G+GKS+ll
  MMETSP1325-20131115|14630_1 147 IDKRV-NLLIVGPAGVGKSSLL 167
                  55454.89************98 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.8e-05     0.031      42      63 ..     145     166 ..     124     183 .. 0.87

  Alignments for each domain:
  == domain 1    score: 13.5 bits;  conditional E-value: 3.8e-05
   PF01695.12  42 sfveqaenlvllGpsGvGKthl 63 
                    ++++ nl+++Gp+GvGK+ l
  MMETSP1325-20131115|14630_1 145 TMIDKRVNLLIVGPAGVGKSSL 166
                  56999**************977 PP

>> PF13479.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00014      0.12       2      21 ..     149     168 ..     148     181 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00014
    PF13479.1   2 kkikvliYGkpGiGKTslak 21 
                  k +++li G++G+GK+sl++
  MMETSP1325-20131115|14630_1 149 KRVNLLIVGPAGVGKSSLLT 168
                  7899**************86 PP

>> PF03029.12  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.8   3.9e+03     191     209 ..     101     119 ..      67     130 .. 0.53
   2 ?    5.6   0.2     0.011       8.7       1      16 [.     155     170 ..     155     183 .. 0.83
   3 ?    5.0   0.0     0.017        14      92     181 ..     200     284 ..     169     322 .. 0.70

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 4.8
   PF03029.12 191 ekdlkklaesiaelleefa 209
                  e+++   ++++++++ee+ 
  MMETSP1325-20131115|14630_1 101 ESKVLIPNNALRQAIEEYL 119
                  2334455666666666654 PP

  == domain 2    score: 5.6 bits;  conditional E-value: 0.011
   PF03029.12   1 vvGpaGsGKttfvgal 16 
                  +vGpaG+GK++++  +
  MMETSP1325-20131115|14630_1 155 IVGPAGVGKSSLLTIM 170
                  79*********98755 PP

  == domain 3    score: 5.0 bits;  conditional E-value: 0.017
   PF03029.12  92 dyvlfDtPGQielftlseslakiveaLesefalvvvylvDsqrltdptkfisgllsalsimlklelPhvvalnkfDllkek...lekeleffe 181
                     ++Dt GQ  l   +            +++ +v++++D +r ++  ++   + +a   m+     +++  nk+D+++++   ++++ ef++
  MMETSP1325-20131115|14630_1 200 RATIYDTSGQPHLKDTVRTQY--------RGTDCVMFVFDVTRRQTLLDLALYIDAAKTEMAGRPHELILLGNKIDIFESRevtSDEAYEFVT 284
                  566778888877766666666........9999*********99997777766666999999999999*********9977665333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       494  (0.0361322); expected 273.4 (0.02)
Passed bias filter:                      458  (0.0334991); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                        17  (0.00124342); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.74u 0.45s 00:00:01.19 Elapsed: 00:00:00.52
# Mc/sec: 1548.42
//
Query:       MMETSP1325-20131115|14641_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       946  (0.0691925); expected 273.4 (0.02)
Passed bias filter:                      554  (0.0405208); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.59
# Mc/sec: 308.68
//
Query:       MMETSP1325-20131115|14643_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   13.7   0.0      0.059   13.2   0.0    1.2  1  PF06183.8 DinI-like family


Domain annotation for each model (and alignments):
>> PF06183.8  DinI-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   4.3e-06     0.059       5      30 ..      27      52 ..      24      56 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.3e-06
    PF06183.8  5 aidALqnELtkriqkkypdtevkvkk 30
                  +d Lq EL +r+ ++yp  ev v +
  MMETSP1325-20131115|14643_1 27 KLDPLQLELVRRLDPLYPFEEVAVHE 52
                 5788**************99999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       116  (0.00848449); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.53
# Mc/sec: 284.85
//
Query:       MMETSP1325-20131115|14645_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      216  (0.0157987); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.33s 00:00:00.65 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|14646_1  [L=197]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-33  113.3   3.3    8.3e-33  112.9   2.3    1.1  1  PF01217.15 Clathrin adaptor complex small chain
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.014   15.2   0.0    1.2  1  PF03467.10 Smg-4/UPF3 family


Domain annotation for each model (and alignments):
>> PF01217.15  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.9   2.3   1.2e-36   8.3e-33      38     141 ..      58     159 ..      53     160 .. 0.95

  Alignments for each domain:
  == domain 1    score: 112.9 bits;  conditional E-value: 1.2e-36
                  HHHTS-SSS-SEEEETTEEEEEEEETTEEEEEEE-----HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTTB----BS---HHHHHHHHHHHHHH CS
   PF01217.15  38 lvsaRdsklsniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdkyfgnVceldlvfnfekvylildEivsgGeiletskkevlkrvelldkl 141
                  lv++R  +   +ve+++ kviY+ryasL+F+v+++++ nel +le ih +ve+Ldkyf++Vceld++fn+ek ++il+E+v+ G i et+k ++lk + l++k+
  MMETSP1325-20131115|14646_1  58 LVTQR--DAVLLVEYRGYKVIYRRYASLFFIVGMKDNMNELGVLEFIHALVETLDKYFESVCELDIMFNLEKAHFILEEMVQNGCIFETNKANILKPIMLMEKA 159
                  67888..56689**************************************************************************************999875 PP

>> PF03467.10  Smg-4/UPF3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   2.1e-06     0.014      58     113 ..     119     176 ..      89     179 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 2.1e-06
                  -EEEES-HHH.HHHHHHH----EEE-----EEE-EE..EE-----XXX..XXXXXXXXX CS
   PF03467.10  58 ayvkFqnlsd.vlefeavfdGyiFidskgnelkavv..elapykkipktskkkkdareG 113
                  + + F+  +   ++ e v++G iF+ +k n+lk+++  e a+   + + sk+ +da+ G
  MMETSP1325-20131115|14646_1 119 LDIMFNLEKAhFILEEMVQNGCIFETNKANILKPIMlmEKASDDSVFS-SKMEDDAQRG 176
                  45667655555889999*****************96336788888886.9999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.35s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 1072.91
//
Query:       MMETSP1325-20131115|14648_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   14.3   0.0      0.033   13.7   0.0    1.2  1  PF10208.4  Degradation arginine-rich protein for mis-folding
      0.037   13.4   3.8       0.45    9.9   0.1    3.3  4  PF02037.22 SAP domain


Domain annotation for each model (and alignments):
>> PF10208.4  Degradation arginine-rich protein for mis-folding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.8e-06     0.033     104     136 ..     126     158 ..     112     171 .. 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 4.8e-06
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF10208.4 104 lkklkvkelkkilaeWgeeckgcleksdfikki 136
                   + l v elk+ l+e g +   c+ek+++i++ 
  MMETSP1325-20131115|14648_1 126 ARTLSVTELKRRLSELGVDSSDCVEKEELIQRY 158
                  57789*************************984 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.13   9.2e+02      11      21 ..      45      55 ..      45      57 .. 0.86
   2 ?   -2.7   0.0       0.6   4.1e+03       5      10 ..      98     103 ..      95     104 .. 0.76
   3 ?    9.9   0.1   6.6e-05      0.45       3      21 ..     128     146 ..     127     146 .. 0.90
   4 ?    2.4   0.0     0.016   1.1e+02      24      32 ..     151     159 ..     150     161 .. 0.88

  Alignments for each domain:
  == domain 1    score: -0.6 bits;  conditional E-value: 0.13
                 HHHHHTT---- CS
   PF02037.22 11 aeLkkrGLpts 21
                 a+L++++L+++
  MMETSP1325-20131115|14648_1 45 ALLAQLNLSST 55
                 689*****987 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 0.6
                  -HHHHH CS
   PF02037.22   5 tVaeLK 10 
                  +V+eL 
  MMETSP1325-20131115|14648_1  98 KVDELI 103
                  899995 PP

  == domain 3    score: 9.9 bits;  conditional E-value: 6.6e-05
                  T--HHHHHHHHHHTT---- CS
   PF02037.22   3 kltVaeLKaeLkkrGLpts 21 
                  +l+V+eLK  L+++G ++s
  MMETSP1325-20131115|14648_1 128 TLSVTELKRRLSELGVDSS 146
                  79*************8875 PP

  == domain 4    score: 2.4 bits;  conditional E-value: 0.016
                  HHHHHHHHH CS
   PF02037.22  24 KaeLieRLk 32 
                  K+eLi+R++
  MMETSP1325-20131115|14648_1 151 KEELIQRYI 159
                  99*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 727.32
//
Query:       MMETSP1325-20131115|14654_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-07   31.2   0.0    3.5e-07   30.1   0.0    1.6  1  PF00072.19 Response regulator receiver domain


Domain annotation for each model (and alignments):
>> PF00072.19  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   2.5e-11   3.5e-07      25      91 ..       2      76 ..       1     102 [] 0.78

  Alignments for each domain:
  == domain 1    score: 30.1 bits;  conditional E-value: 2.5e-11
                 EEEEESSSHHHHHHHHHHH.....ESEEEEESS-TT----HHH..HHH.HHHTTTSEEEEEES-TTHHHHHHHHH CS
   PF00072.19 25 evaeaddgeealellkekd.....pDlillDiempgmdGlell..kei.reeepklpiivvtahgeeedalealk 91
                 +v++a dge+al++++e+      + l++lD+ mp+++G++++  +++ + ++ ++p +++ta ++ +  ++ ++
  MMETSP1325-20131115|14654_1  2 QVDTACDGEQALAKIDELShqgdeYALVMLDVFMPNLTGVQVAvrTRLgAYHGATMPLVACTAADDVAEWTKGYD 76
                 699************888888899****************9983356655666***********99877666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       276  (0.0201872); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 470.05
//
Query:       MMETSP1325-20131115|14659_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-18   66.8   3.7    3.4e-18   66.2   2.6    1.3  1  PF00112.18 Papain family cysteine protease
     0.0091   14.4   0.6     0.0091   14.4   0.4    1.2  1  PF03051.10 Peptidase C1-like family


Domain annotation for each model (and alignments):
>> PF00112.18  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   2.6     5e-22   3.4e-18     167     218 ..       2      52 ..       1      54 [. 0.95

  Alignments for each domain:
  == domain 1    score: 66.2 bits;  conditional E-value: 5e-22
                  -EEEEE---BSCTTC-EEEEE-SB-TT------EEEESSSSSGGGTTSSEEE CS
   PF00112.18 167 nhavlivGygvengkkyWivkNSWgtdwGekGYiriargknnecgieseavy 218
                  +h+vl+v ygv++g++yW++kNSWg+ wGe+GY+r +rg n +cg+++++v 
  MMETSP1325-20131115|14659_1   2 DHGVLAVAYGVQEGTDYWVIKNSWGSAWGEEGYYRQTRGDN-HCGVANMVVH 52 
                  8**************************************87.******9986 PP

>> PF03051.10  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.4   1.3e-06    0.0091     366     398 ..       8      38 ..       1      66 [. 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 1.3e-06
   PF03051.10 366 tgvdvdddgkvtkwkvEnsWGedsGekGyfvms 398
                  ++     ++ +  w + nsWG   Ge+Gy+  +
  MMETSP1325-20131115|14659_1   8 VAYG--VQEGTDYWVIKNSWGSAWGEEGYYRQT 38 
                  3333..4667788****************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       263  (0.0192364); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.59
# Mc/sec: 373.67
//
Query:       MMETSP1325-20131115|14663_1  [L=51]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.6e-06   24.9   5.0    9.6e-06   24.9   3.5    2.5  3  PF02493.15 MORN repeat
  ------ inclusion threshold ------
       0.79    9.5   5.4        1.5    8.6   3.7    1.6  1  PF13585.1  C-terminal domain of CHU protein family


Domain annotation for each model (and alignments):
>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.23   1.6e+03       3       5 ..      10      12 ..       3      16 .. 0.56
   2 !   24.9   3.5   1.4e-09   9.6e-06       1      22 [.      17      38 ..      17      39 .. 0.97
   3 ?    0.3   0.0     0.093   6.4e+02       1       5 [.      40      44 ..      40      50 .. 0.78

  Alignments for each domain:
  == domain 1    score: -1.0 bits;  conditional E-value: 0.23
                 -EE CS
   PF02493.15  3 GeW 5 
                 G++
  MMETSP1325-20131115|14663_1 10 GQY 12
                 333 PP

  == domain 2    score: 24.9 bits;  conditional E-value: 1.4e-09
                 EE-EEETTEEE-EEEB------ CS
   PF02493.15  1 YeGeWknGkrhGkGvytwpdGd 22
                 YeG ++n+k+ G G+ytw++Gd
  MMETSP1325-20131115|14663_1 17 YEGGFRNNKKYGRGCYTWSNGD 38
                 *********************9 PP

  == domain 3    score: 0.3 bits;  conditional E-value: 0.093
                 EE-EE CS
   PF02493.15  1 YeGeW 5 
                 ++G+W
  MMETSP1325-20131115|14663_1 40 FQGTW 44
                 68999 PP

>> PF13585.1  C-terminal domain of CHU protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.7   0.00022       1.5      36      70 ..       1      35 [.       1      51 [] 0.92

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.00022
    PF13585.1 36 rwGslVyesnnyk.newdGtsngggkklpeGtYfYv 70
                 r Gs+++e+ +y  n+++G  ++ +kk   G Y ++
  MMETSP1325-20131115|14663_1  1 RTGSKIWETGQYAgNKYEGGFRN-NKKYGRGCYTWS 35
                 89***********9******995.8********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|14664_1  [L=38]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (38 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       269  (0.0196752); expected 273.4 (0.02)
Passed bias filter:                      259  (0.0189438); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.25u 0.43s 00:00:00.68 Elapsed: 00:00:00.56
# Mc/sec: 162.61
//
Query:       MMETSP1325-20131115|14665_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.043   13.6   0.3      0.056   13.2   0.2    1.2  1  PF01363.16 FYVE zinc finger


Domain annotation for each model (and alignments):
>> PF01363.16  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   4.1e-06     0.056       2      24 ..      49      71 ..      48      72 .] 0.87

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 4.1e-06
   PF01363.16  2 kwvpdaeakkCeiCakkFsltrr 24
                  wv d+e+ +C+ C++ F+ ++r
  MMETSP1325-20131115|14665_1 49 GWVLDEESAACMWCDQIFTNFTR 71
                 5*****************76665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       196  (0.0143359); expected 273.4 (0.02)
Passed bias filter:                      183  (0.013385); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.72
# Mc/sec: 239.64
//
Query:       MMETSP1325-20131115|14668_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.13   11.6   0.0       0.13   11.6   0.0    1.1  1  PF13621.1 Cupin-like domain


Domain annotation for each model (and alignments):
>> PF13621.1  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.2e-06      0.13     127     163 ..      54      90 ..       6      91 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 9.2e-06
    PF13621.1 127 kkpeavnlWlGnsasssslHhDhyeNlycvvsGrKrf 163
                  ++++ ++ ++G ++ +   H+D   N+ ++++G Kr 
  MMETSP1325-20131115|14668_1  54 QANKGIQCRFGMKGVIAEAHYDGGRNMVAMLKGAKRY 90 
                  336788899**************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 408.27
//
Query:       MMETSP1325-20131115|14669_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       234  (0.0171153); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.64
# Mc/sec: 887.40
//
Query:       MMETSP1325-20131115|14678_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        95  (0.00694851); expected 273.4 (0.02)
Passed bias filter:                       94  (0.00687537); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.26u 0.36s 00:00:00.62 Elapsed: 00:00:00.48
# Mc/sec: 179.73
//
Query:       MMETSP1325-20131115|14681_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 326.78
//
Query:       MMETSP1325-20131115|14682_1  [L=342]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       220  (0.0160913); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.65
# Mc/sec: 1260.85
//
Query:       MMETSP1325-20131115|14688_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       250  (0.0182855); expected 273.4 (0.02)
Passed bias filter:                      225  (0.016457); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.32s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 637.43
//
Query:       MMETSP1325-20131115|14693_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       194  (0.0141896); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.40s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 210.21
//
Query:       MMETSP1325-20131115|14689_1  [L=216]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.61
# Mc/sec: 848.55
//
Query:       MMETSP1325-20131115|14701_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.4e-14   51.3   9.3    1.4e-13   50.7   6.4    1.3  1  PF04968.7 CHORD


Domain annotation for each model (and alignments):
>> PF04968.7  CHORD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   6.4     1e-17   1.4e-13      20      65 .]       2      48 ..       1      48 [. 0.93

  Alignments for each domain:
  == domain 1    score: 50.7 bits;  conditional E-value: 1e-17
                 -TT---BB------BTTBB--TTTT--.BSSHHHHTT----B----- CS
    PF04968.7 20 eeeaCvyHpgapvFhegskgwsCCkkk.vldFdeFlkiegCtkgkhs 65
                 +e+aC+yH  +pvFhe+ k+w CC +k ++d+d+F++++gC +  h+
  MMETSP1325-20131115|14701_1  2 HEAACRYHRLPPVFHETAKFWACCPDKkCYDWDSFMAVKGCMTACHT 48
                 6899********************8777**************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       373  (0.027282); expected 273.4 (0.02)
Passed bias filter:                      287  (0.0209918); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.40s 00:00:00.82 Elapsed: 00:00:00.49
# Mc/sec: 748.25
//
Query:       MMETSP1325-20131115|14704_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      137  (0.0100205); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.51
# Mc/sec: 291.32
//
Query:       MMETSP1325-20131115|14707_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.48
# Mc/sec: 289.56
//
Query:       MMETSP1325-20131115|14710_1  [L=188]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0018   17.5   0.1     0.0038   16.5   0.1    1.6  1  PF05186.8 Dpy-30 motif


Domain annotation for each model (and alignments):
>> PF05186.8  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   2.8e-07    0.0038      13      42 .]     146     177 ..     140     177 .. 0.87

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.8e-07
    PF05186.8  13 iLlqGLtelakeRPe..DPiefLaeyLlknrs 42 
                   L+ +L el+ke+P+  D ++ L+e+Ll n++
  MMETSP1325-20131115|14710_1 146 LLTTALSELCKEKPAglDAVKRLGEWLLANNP 177
                  5899**********877***********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       232  (0.016969); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.36s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 979.38
//
Query:       MMETSP1325-20131115|14713_1  [L=35]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (35 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       323  (0.0236249); expected 273.4 (0.02)
Passed bias filter:                      288  (0.021065); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 178.45
//
Query:       MMETSP1325-20131115|14712_1  [L=183]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.5e-06   25.4   0.0    1.3e-05   24.9   0.0    1.2  1  PF08030.7 Ferric reductase NAD binding domain


Domain annotation for each model (and alignments):
>> PF08030.7  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   9.7e-10   1.3e-05      84     148 ..      31      97 ..      13      98 .. 0.77

  Alignments for each domain:
  == domain 1    score: 24.9 bits;  conditional E-value: 9.7e-10
                  xxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    PF08030.7  84 sdqlissiegen..vdavsgtrfvkihfgRPnlkevlkdi.askhknssvgvfvCGppklvkevkklv 148
                  s++ i+++ ++   +++v g+  + + +gRP++++++k++   k++n ++g   CG+p++  ++kk +
  MMETSP1325-20131115|14712_1  31 SKKQIEMQTNPVgaKNRVGGSD-TWVWNGRPDWSNIFKHLrDLKNQNREIGCCFCGAPVIGADLKKNC 97 
                  3334444444447755667777.9999*************76789999****************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      274  (0.020041); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.39s 00:00:00.84 Elapsed: 00:00:00.55
# Mc/sec: 797.33
//
Query:       MMETSP1325-20131115|14714_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       362  (0.0264775); expected 273.4 (0.02)
Passed bias filter:                      310  (0.0226741); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.37s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 674.89
//
Query:       MMETSP1325-20131115|14721_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       143  (0.0104593); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 531.99
//
Query:       MMETSP1325-20131115|14717_1  [L=220]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-08   31.3   0.9    1.2e-07   30.8   0.6    1.2  1  PF09851.4  Short C-terminal domain
  ------ inclusion threshold ------
      0.015   15.7   0.6      0.032   14.7   0.4    1.5  1  PF06464.6  DMAP1-binding Domain
      0.085   12.5   0.4       0.16   11.6   0.1    1.6  2  PF05120.7  Gas vesicle protein G


Domain annotation for each model (and alignments):
>> PF09851.4  Short C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.6   2.5e-11   1.2e-07       4      31 .]     191     218 ..     188     218 .. 0.94

  Alignments for each domain:
  == domain 1    score: 30.8 bits;  conditional E-value: 2.5e-11
    PF09851.4   4 aLekLkeLyarGeIteEEFeakKkkLLg 31 
                  ++++LkeL++  +It+EEF++kKk+LL+
  MMETSP1325-20131115|14717_1 191 KIKELKELLDCDAITQEEFNEKKKQLLS 218
                  79************************96 PP

>> PF06464.6  DMAP1-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.4   6.9e-06     0.032       9      41 ..     188     220 .]     180     220 .] 0.88

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 6.9e-06
    PF06464.6   9 vrerLaeLeldlseGdiTeKgyekkklkLLreF 41 
                  + ++++eL + l+   iT+++ + kk++LL++F
  MMETSP1325-20131115|14717_1 188 IPKKIKELKELLDCDAITQEEFNEKKKQLLSRF 220
                  4578999999999999**************998 PP

>> PF05120.7  Gas vesicle protein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.5   1.1e+04       8      20 ..     156     168 ..     152     171 .. 0.51
   2 ?   11.6   0.1   3.6e-05      0.16      31      64 ..     186     219 ..     177     220 .] 0.92

  Alignments for each domain:
  == domain 1    score: -3.9 bits;  conditional E-value: 2.5
    PF05120.7   8 PvrgvvWiaekiq 20 
                  Pvr    +ae++ 
  MMETSP1325-20131115|14717_1 156 PVRPAEAVAEEVD 168
                  4444444444444 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 3.6e-05
    PF05120.7  31 enlrkeLaeLqleleaGeIseeeFdrrEeeLLdr 64 
                  +++ k+  eL+  l+   I++eeF+++ ++LL r
  MMETSP1325-20131115|14717_1 186 DQIPKKIKELKELLDCDAITQEEFNEKKKQLLSR 219
                  56889999************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       644  (0.0471036); expected 273.4 (0.02)
Passed bias filter:                      349  (0.0255266); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.42s 00:00:01.08 Elapsed: 00:00:00.61
# Mc/sec: 864.26
//
Query:       MMETSP1325-20131115|14724_1  [L=73]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   14.7   0.1      0.014   14.7   0.1    1.1  1  PF10083.4  Uncharacterized protein conserved in bacteria (DUF2321)
      0.028   14.4   0.0      0.038   14.1   0.0    1.2  1  PF00536.25 SAM domain (Sterile alpha motif)
      0.047   12.7   0.3      0.049   12.7   0.2    1.0  1  PF12889.2  Protein of unknown function (DUF3829)
       0.12   12.3   0.3       0.13   12.1   0.2    1.3  1  PF00542.14 Ribosomal protein L7/L12 C-terminal domain


Domain annotation for each model (and alignments):
>> PF10083.4  Uncharacterized protein conserved in bacteria (DUF2321)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   4.2e-06     0.014     101     137 ..      34      70 ..      11      73 .] 0.83

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 4.2e-06
    PF10083.4 101 dekeklkedledlvvetpktkvaalrfkkllakvgts 137
                  d ke   ed++dlv e +  k+aa rfkk l  +g++
  MMETSP1325-20131115|14724_1  34 DLKEMTDEDVDDLVAECAIPKLAARRFKKALVELGAK 70 
                  45677789*********************99988776 PP

>> PF00536.25  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.1e-05     0.038       7      45 ..       8      46 ..       6      54 .. 0.92

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.1e-05
                 SHHHHHHHTT-GGGHHHHHCT--SHHHHTT--HHHHHHH CS
   PF00536.25  7 dVgeWLesiglgqYvdnFrageidgdallllteedLekl 45
                 ++ eW++  ++ +Y+ n ++    +  l+++t+ed  +l
  MMETSP1325-20131115|14724_1  8 SLEEWIDNNKMTKYKLNIMSLAAEINDLKEMTDEDVDDL 46
                 678********************************8775 PP

>> PF12889.2  Protein of unknown function (DUF3829)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   1.4e-05     0.049     185     236 ..      15      68 ..       8      73 .] 0.78

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 1.4e-05
    PF12889.2 185 eldlaalkaalaelekaledlkkltkenadke..mlssflssldefkssaksfi 236
                  + +++++k  +++l ++++dlk++t+e+ d+   ++   + +++ fk+++ +  
  MMETSP1325-20131115|14724_1  15 NNKMTKYKLNIMSLAAEINDLKEMTDEDVDDLvaECAIPKLAARRFKKALVELG 68 
                  4566666667*****************999878888888888888888777665 PP

>> PF00542.14  Ribosomal protein L7/L12 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   3.8e-05      0.13      30      67 ..      34      73 .]       9      73 .] 0.80

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.8e-05
   PF00542.14 30 eAKdlVesapkevkeg..vskeeAeeikkkLeeaGAkvel 67
                 + K++ ++   ++ ++  ++k  A  +kk+L e GAk+++
  MMETSP1325-20131115|14724_1 34 DLKEMTDEDVDDLVAEcaIPKLAARRFKKALVELGAKINV 73
                 66777766644444333599*****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       656  (0.0479813); expected 273.4 (0.02)
Passed bias filter:                      588  (0.0430076); expected 273.4 (0.02)
Passed Vit filter:                        67  (0.00490053); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.43s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 372.20
//
Query:       MMETSP1325-20131115|14726_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-83  278.3   2.7    2.4e-83  278.1   1.9    1.0  1  PF01015.13 Ribosomal S3Ae family
  ------ inclusion threshold ------
      0.069   12.4   0.0       0.13   11.4   0.0    1.5  1  PF04083.11 Partial alpha/beta-hydrolase lipase region
      0.079   12.8   0.1       0.13   12.1   0.1    1.4  1  PF05566.7  Orthopoxvirus interleukin 18 binding protein
        0.3   11.1   3.1        1.1    9.3   2.0    1.9  2  PF06935.6  Protein of unknown function (DUF1284)


Domain annotation for each model (and alignments):
>> PF01015.13  Ribosomal S3Ae family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  278.1   1.9   7.1e-87   2.4e-83       2     195 .]      12     222 ..      11     222 .. 0.99

  Alignments for each domain:
  == domain 1    score: 278.1 bits;  conditional E-value: 7.1e-87
                  -----.---S-TTSSEEEEEEE--TTS-SS---EEEEE-.......TTS----EEEEES-SSSST.TS---EEEEEEEEE----EEEEE---B--HHHHHHS--TTB-EEEEEEEEE-----EEEEEEEEEE---.........-THHHHHHHHHHHHHHHHHHHHT---HHHHHHH---HHHHHHHHHHTTT--EEEEEEEEEEEEE--- CS
   PF01015.13   2 kkkgk.kkkvdkwkrKeWykvkAPkifgereiGktlank.......seklkgRvvevsLadltndasksnrklklkieevegknalTnFhgmeltrdklrslvrkrsskieaivdvktkDgyllrvfviaftkkr.........aktsqkkaiRkkmveiiekeaseldlkelvkkliegkiakeiekeakkIyplrkveIrKvkvlkepk 195
                  +kkg+ kk+vd++ +KeWy++kAP++f+ r++Gktl+++       se+lkgRv+evsLadl+nd+++++rk+kl +e+v+g n+lTnFhgm+ltrdkl+sl++k+ ++iea+ +v+t+Dgy++r+f+iaft+k          a++sq++aiRkkmvei+++eas++dlkelv+kli+++i+++iek+++ I+plr+v+IrKvkvlk+pk
  MMETSP1325-20131115|14726_1  12 SKKGGkKKAVDPFLKKEWYDIKAPSVFSVRKCGKTLITRtqgtkiaSEGLKGRVFEVSLADLNNDEDQQYRKIKLCCEDVQGYNVLTNFHGMDLTRDKLCSLIKKWGTLIEANETVRTTDGYTIRLFCIAFTTKMpnqmkktcyAQSSQIRAIRKKMVEIMSEEASKCDLKELVQKLIPESIGADIEKACQCIFPLRDVYIRKVKVLKKPK 222
                  677777***********************************************************************************************************************************************************************************************************97 PP

>> PF04083.11  Partial alpha/beta-hydrolase lipase region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.9e-05      0.13       4      35 ..     113     145 ..     111     172 .. 0.77

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 3.9e-05
   PF04083.11   4 lirkhGypve.ehkVqTeDGYiLtlhRippkne 35 
                  li+k+G  +e + +V+T DGY + l+ i    +
  MMETSP1325-20131115|14726_1 113 LIKKWGTLIEaNETVRTTDGYTIRLFCIAFTTK 145
                  68888888883468***********98877765 PP

>> PF05566.7  Orthopoxvirus interleukin 18 binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   3.8e-05      0.13      55     100 ..     101     146 ..      72     171 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 3.8e-05
    PF05566.7  55 lakdmksdedakfiehlgegikedetvrtidgrivtlrkvlhvtdt 100
                     d+  d+ + +i++ g  i  +etvrt+dg  + l  +   t  
  MMETSP1325-20131115|14726_1 101 HGMDLTRDKLCSLIKKWGTLIEANETVRTTDGYTIRLFCIAFTTKM 146
                  56799999************************98888766655543 PP

>> PF06935.6  Protein of unknown function (DUF1284)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.47   1.6e+03      32      66 ..     108     141 ..     105     146 .. 0.70
   2 ?    9.3   2.0   0.00033       1.1      36      94 ..     144     202 ..     139     205 .. 0.85

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 0.47
    PF06935.6  32 DdiCkacpnkkeslCeseekvrelDrkvlellklk 66 
                  D++C+ + +k ++l e++e+vr++D  +++l+ ++
  MMETSP1325-20131115|14726_1 108 DKLCSLI-KKWGTLIEANETVRTTDGYTIRLFCIA 141
                  7777654.455556778888999999888887665 PP

  == domain 2    score: 9.3 bits;  conditional E-value: 0.00033
    PF06935.6  36 kacpnkkeslCesee.kvrelDrkvlellklkegkelkleeavkkikekleeeklkeiCe 94 
                  +++pn+ +++C +++ ++r++ +k++e+++ +e ++++l+e+v+k+  +    +++++C+
  MMETSP1325-20131115|14726_1 144 TKMPNQMKKTCYAQSsQIRAIRKKMVEIMS-EEASKCDLKELVQKLIPESIGADIEKACQ 202
                  589*********77769**********995.66677999999988888888889****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       674  (0.0492978); expected 273.4 (0.02)
Passed bias filter:                      480  (0.0351083); expected 273.4 (0.02)
Passed Vit filter:                        37  (0.00270626); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.41s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 1241.31
//
Query:       MMETSP1325-20131115|14733_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       483  (0.0353277); expected 273.4 (0.02)
Passed bias filter:                      360  (0.0263312); expected 273.4 (0.02)
Passed Vit filter:                        26  (0.0019017); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.38s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 818.76
//
Query:       MMETSP1325-20131115|14734_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       149  (0.0108982); expected 273.4 (0.02)
Passed bias filter:                      131  (0.00958163); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.54
# Mc/sec: 408.27
//
Query:       MMETSP1325-20131115|14735_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0064   16.2   0.0      0.012   15.3   0.0    1.4  1  PF09336.5 Vps4 C terminal oligomerisation domain
  ------ inclusion threshold ------
      0.043   13.5   0.2          8    6.2   0.1    2.2  2  PF12703.2 Toxin of toxin-antitoxin type 1 system
      0.077   12.6   0.0      0.098   12.3   0.0    1.1  1  PF07738.8 Sad1 / UNC-like C-terminal


Domain annotation for each model (and alignments):
>> PF09336.5  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.6e-06     0.012      22      59 ..       6      45 ..       2      47 .. 0.88

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 2.6e-06
                 GGGB---..-B-HHHHHHHHHCS--SS-HHHHHHHHHHHH CS
    PF09336.5 22 eeklleP..pvtlkDflkalkttkptVskeDlekheeFtk 59
                 ++ + +P  ++tl +f++a+++++ +V ++ + k+e + +
  MMETSP1325-20131115|14735_1  6 DDPIVNPttQITLAHFEEAMSKARRSVPESAIRKYEAYVN 45
                 5667888778**************************9865 PP

>> PF12703.2  Toxin of toxin-antitoxin type 1 system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0033        15      53      72 ..      12      31 ..      10      33 .. 0.87
   2 ?    6.2   0.1    0.0018         8      53      69 ..      50      66 ..      40      70 .. 0.88

  Alignments for each domain:
  == domain 1    score: 5.3 bits;  conditional E-value: 0.0033
    PF12703.2 53 eTGrATqaDfrEAleavrqa 72
                 +T + T a f+EA+ + r++
  MMETSP1325-20131115|14735_1 12 PTTQITLAHFEEAMSKARRS 31
                 68899*********998875 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.0018
    PF12703.2 53 eTGrATqaDfrEAleav 69
                 +T +AT   f EAl++v
  MMETSP1325-20131115|14735_1 50 DTAQATAFSFDEALKKV 66
                 799***********998 PP

>> PF07738.8  Sad1 / UNC-like C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.2e-05     0.098      45      92 ..      14      64 ..      10      76 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 2.2e-05
    PF07738.8 45 eavtlehveksvap.....isSapkdfevlgseespeekwvllgefsydedgk 92
                 +++tl+h+e++++       +Sa++++e ++  +++++   + + fs+de  k
  MMETSP1325-20131115|14735_1 14 TQITLAHFEEAMSKarrsvPESAIRKYEAYVNSMKQDT--AQATAFSFDEALK 64
                 68*********9999998779**********9999877..5556677666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       480  (0.0351083); expected 273.4 (0.02)
Passed bias filter:                      399  (0.0291837); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.41s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|14741_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.058   13.1   0.4      0.064   12.9   0.2    1.0  1  PF08564.5 Cdc37 C terminal domain
      0.072   13.0   4.2       0.07   13.1   2.9    1.1  1  PF12235.3 Fragile X-related 1 protein C terminal


Domain annotation for each model (and alignments):
>> PF08564.5  Cdc37 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   9.3e-06     0.064      50      90 ..       2      42 ..       1      53 [. 0.66

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.3e-06
    PF08564.5 50 eeAekiverliesGllsleeki..egekkkkeleeeeeeeeae 90
                 e Ae+ v+ +  sGl  +++ +  ege+ + e  +e  ee + 
  MMETSP1325-20131115|14741_1  2 ETAEEEVNACASSGLAPPSATAaeEGESPWSEAGDE--EEREP 42
                 78****************999755555555555544..22222 PP

>> PF12235.3  Fragile X-related 1 protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.9     1e-05      0.07      70     116 ..      13      55 ..       2      59 .] 0.66

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 1e-05
    PF12235.3  70 nseasnasEteserrdElsdrslagde.dreprsrrdsrrrrggrgRg 116
                  +s  + +s t  e  +  s++s agde +rep s r s +     gRg
  MMETSP1325-20131115|14741_1  13 SSGLAPPSATAAE--EGESPWSEAGDEeEREPSSSRRSSSSS---GRG 55 
                  5555556666544..3349*******9889998876655544...555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      171  (0.0125073); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.32s 00:00:00.64 Elapsed: 00:00:00.45
# Mc/sec: 314.19
//
Query:       MMETSP1325-20131115|14746_1  [L=100]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0097   15.2   1.0      0.011   15.1   0.7    1.2  1  PF10500.4 Nuclear RNA-splicing-associated protein
  ------ inclusion threshold ------
        3.7    7.5  11.5        1.1    9.2   2.6    2.1  2  PF14346.1 Domain of unknown function (DUF4398)


Domain annotation for each model (and alignments):
>> PF10500.4  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.7   1.6e-06     0.011      67     103 ..      10      45 ..       5      98 .. 0.61

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.6e-06
    PF10500.4  67 ssssssssssssskseekrkkrkkkkkkrekkkekke 103
                  +sssss+ssss  ++e++r+ r +k + + ++++  +
  MMETSP1325-20131115|14746_1  10 ASSSSSPSSSSLTPAEASRQERLAKVNASLAQQKM-R 45 
                  57777888888888888888888877775444332.2 PP

>> PF14346.1  Domain of unknown function (DUF4398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.9    0.0097        66      29      82 ..      24      44 ..       7      57 .. 0.66
   2 ?    9.2   2.6   0.00016       1.1      34      55 ..      75      96 ..      50     100 .] 0.72

  Alignments for each domain:
  == domain 1    score: 3.5 bits;  conditional E-value: 0.0097
    PF14346.1 29 AeaagaekyapveLeeAkekLaaAkaalaegkyeeArrlaeqAeadaelAeaka 82
                 A                                 eA r+   A+++a+lA++k 
  MMETSP1325-20131115|14746_1 24 A---------------------------------EASRQERLAKVNASLAQQKM 44
                 3.................................55555555555555555553 PP

  == domain 2    score: 9.2 bits;  conditional E-value: 0.00016
    PF14346.1 34 aekyapveLeeAkekLaaAkaa 55
                 a+ +a++e++eA+++L++A + 
  MMETSP1325-20131115|14746_1 75 ASDRAAEEMDEAEQALEQADQR 96
                 2336677777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       973  (0.0711673); expected 273.4 (0.02)
Passed bias filter:                      675  (0.049371); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.42s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 489.05
//
Query:       MMETSP1325-20131115|14748_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.9    6.4   5.1          4    5.9   3.6    1.2  1  PF01112.13 Asparaginase


Domain annotation for each model (and alignments):
>> PF01112.13  Asparaginase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   3.6   0.00029         4     209     239 ..      10      40 ..       3      41 .. 0.92

  Alignments for each domain:
  == domain 1    score: 5.9 bits;  conditional E-value: 0.00029
                  ----B--TT------EE-TTSEEE------H CS
   PF01112.13 209 ivGRvgDspiiGAGaYanklagvsaTGkGev 239
                    GRvgD  i+  Ga a +  +v a G Ge+
  MMETSP1325-20131115|14748_1  10 CEGRVGDVSIVPCGAAAGSGEAVRAGGAGED 40 
                  57***************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      125  (0.00914277); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 371.68
//
Query:       MMETSP1325-20131115|14749_1  [L=89]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.6    8.9   4.7         12    6.2   0.0    2.5  2  PF07581.7 The GLUG motif


Domain annotation for each model (and alignments):
>> PF07581.7  The GLUG motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   1.6     0.012   1.6e+02       4      14 ..       4      14 ..       2      19 .. 0.83
   2 ?    6.2   0.0   0.00086        12       3      14 ..      46      57 ..      44      69 .. 0.83

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.012
    PF07581.7  4 avGGLvGgagg 14
                 ++GG++G a g
  MMETSP1325-20131115|14749_1  4 QLGGFGGAAVG 14
                 68*****9975 PP

  == domain 2    score: 6.2 bits;  conditional E-value: 0.00086
    PF07581.7  3 tavGGLvGgagg 14
                 ++ GG++G a +
  MMETSP1325-20131115|14749_1 46 SYTGGFGGSASA 57
                 789*****9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       140  (0.0102399); expected 273.4 (0.02)
Passed bias filter:                      124  (0.00906963); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.51
# Mc/sec: 418.19
//
Query:       MMETSP1325-20131115|14750_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-17   60.8   0.3    1.1e-16   60.7   0.2    1.0  1  PF00072.19 Response regulator receiver domain
  ------ inclusion threshold ------
      0.019   14.5   0.0      0.023   14.3   0.0    1.1  1  PF00707.17 Translation initiation factor IF-3, C-terminal domain


Domain annotation for each model (and alignments):
>> PF00072.19  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.2   1.6e-20   1.1e-16       1      68 [.       5      71 ..       5      72 .] 0.97

  Alignments for each domain:
  == domain 1    score: 60.7 bits;  conditional E-value: 1.6e-20
                 EEEESSSHHHHHHHHHHHHHTTSEEEEEESSSHHHHHHHHHHHESEEEEESS-TT----HHHHHHHHH CS
   PF00072.19  1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeiree 68
                 + +vdD+++++  +   le eg+ ev++  dg++al+ +++k pD+ +lDi+mp+mdG++ll+++r++
  MMETSP1325-20131115|14750_1  5 IALVDDDRNILTSVSITLEAEGF-EVETYNDGQQALDAFNKKLPDMAVLDIKMPRMDGMDLLQRLRQK 71
                 679********************.*****************************************986 PP

>> PF00707.17  Translation initiation factor IF-3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.3e-06     0.023      35      83 ..      18      67 ..      15      72 .] 0.88

  Alignments for each domain:
  == domain 1    score: 14.3 bits;  conditional E-value: 3.3e-06
   PF00707.17 35 VkvtirfrGReiahkelgkevldrvaeelediakvekkp.klegrqmtmi 83
                 V +t+   G e+++ + g++ ld + ++l d+a+++ k  +++g  +   
  MMETSP1325-20131115|14750_1 18 VSITLEAEGFEVETYNDGQQALDAFNKKLPDMAVLDIKMpRMDGMDLLQR 67
                 899********************************97766**99887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       312  (0.0228204); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.37s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 345.08
//
Query:       MMETSP1325-20131115|14745_1  [L=153]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-19   67.8   0.6      5e-19   67.8   0.4    1.9  2  PF01246.15 Ribosomal protein L24e
    0.00037   19.1   9.6    0.00043   18.9   6.6    1.0  1  PF03999.7  Microtubule associated protein (MAP65/ASE1 family)
  ------ inclusion threshold ------
      0.023   14.6   6.7      0.027   14.4   4.6    1.1  1  PF08633.5  Rox3 mediator complex subunit
      0.024   14.0   1.6      0.032   13.6   1.1    1.2  1  PF05603.7  Protein of unknown function (DUF775)
        7.6    6.1   8.7        9.7    5.7   6.1    1.1  1  PF02862.12 DDHD domain


Domain annotation for each model (and alignments):
>> PF01246.15  Ribosomal protein L24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   0.4   1.8e-22     5e-19       2      71 .]       4      73 ..       3      73 .. 0.97
   2 ?   -2.0   0.6       1.1     3e+03      59      59 ..     115     115 ..      93     132 .. 0.56

  Alignments for each domain:
  == domain 1    score: 67.8 bits;  conditional E-value: 1.8e-22
                 ---B-S----B-------EEE-----EEE-SSHHHHHHHH----GGG-TTSTTT.....----------- CS
   PF01246.15  2 kvelcsfsgakiyPGkGimfvrkDskvfrFlssKceknfklkrnprklaWTklyRkqhkkgeaeeaakkr 71
                 k+e c fs +++yPG+G+++vr+D++ +   ssK ++++ ++ +p+kl+WT+  R+ +kk +++ + kkr
  MMETSP1325-20131115|14745_1  4 KTEKCAFSEYNVYPGHGMRMVRRDGQPVTLSSSKTKSMMLQRMKPSKLQWTQGWRRLNKKMQVDTTVKKR 73
                 99************************************************************99998876 PP

  == domain 2    score: -2.0 bits;  conditional E-value: 1.1
                  . CS
   PF01246.15  59 h 59 
                  +
  MMETSP1325-20131115|14745_1 115 K 115
                  2 PP

>> PF03999.7  Microtubule associated protein (MAP65/ASE1 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   6.6   1.6e-07   0.00043     430     552 ..      13     136 ..       5     149 .. 0.86

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 1.6e-07
                  .HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---....XXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX CS
    PF03999.7 430 eaqwerhrqekqrakkrkklankeskvikalykskessvpstpslrrnsrnltsntkskkrtknltksskseeaslaskstgatkkrstarrlstlskltaas.rsskknlirskangaaskkl 552
                    +++ h  ++ r   ++ + ++ ++   +l + k+s  + t + rr ++ +   t+ kkrt ++tk ++++   ++ + +++  ++++ r +++ ++l   + r++ k+  ++k+ g ++ k+
  MMETSP1325-20131115|14745_1  13 YNVYPGHGMRMVRRDGQPVTLSSSKTKSMMLQRMKPSKLQWTQGWRRLNKKMQVDTTVKKRTRKTTKFQRAIVGISIDELKKKKSQKPHERSAQREAALREVKeRNKAKKAAAKKNEGGKKDKA 136
                  56899999999999999999999999999****************************************************************9999997665166666666666666665554 PP

>> PF08633.5  Rox3 mediator complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   4.6   9.8e-06     0.027     101     207 ..      37     153 .]      20     153 .] 0.81

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 9.8e-06
    PF08633.5 101 lsravdmargevpkkdw......nssvLgefekskptefkndakfavadlaldldgtqklgsvkkqnrlldasrkkrkakkrsysdssfegygegyadD.....dggystgeasgkkr 207
                    + +  +r +++k +w       ++ + +++ + +++ ++  kf+ a  +++ d  +k++s+k+++r +++++  r++k+r+   ++   + eg + D       g+  g ++g kr
  MMETSP1325-20131115|14745_1  37 KTKSMMLQRMKPSKLQWtqgwrrLNKKM-QVDTTVKKRTRKTTKFQRAIVGISIDELKKKKSQKPHERSAQREAALREVKERNKAKKAAAKKNEGGKKDkafqkTKGFGKGATGGAKR 153
                  4455556666666666655534444444.7788888888888*********************************************9999999999997777667888888999988 PP

>> PF05603.7  Protein of unknown function (DUF775)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.1   1.2e-05     0.032      74     143 ..      46     122 ..      41     144 .. 0.59

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.2e-05
    PF05603.7  74 eKpSaifkvkn....dekdmldedepeqa...nkqatiqiGisiepleelaqklaalkqensssaaaassstlstse 143
                   KpS     +     ++k+++d++ ++++    k +++++Gisi++l++ +++ ++ ++++ ++a  + ++ ++ ++
  MMETSP1325-20131115|14745_1  46 MKPSKLQWTQGwrrlNKKMQVDTTVKKRTrktTKFQRAIVGISIDELKKKKSQKPHERSAQREAALREVKERNKAKK 122
                  5666544444466663333333333333344488899***********99999988887665544333333333222 PP

>> PF02862.12  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.1    0.0035       9.7      72     170 ..      43     138 ..      32     145 .. 0.66

  Alignments for each domain:
  == domain 1    score: 5.7 bits;  conditional E-value: 0.0035
   PF02862.12  72 lsslkpvsipstkksklgaleekesltnigkavkqsvesltsslsegiasslrnsslslssedeeseeeseasklsqksksekkkeseeetkeeeeeak 170
                  l+++kp ++++t++  + + ++ +  t+++k+ +++++ +++ ++ ++  +l+++++++++e ++++e++ ++ + +++k +k +++++e  ++++  +
  MMETSP1325-20131115|14745_1  43 LQRMKPSKLQWTQGWRRLNKKM-QVDTTVKKRTRKTTK-FQRAIVGISIDELKKKKSQKPHERSAQREAALREVK-ERNKAKKAAAKKNEGGKKDKAFQ 138
                  4558999999999977776664.777777777766665.888888888888877777777777776666665555.34444444445555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1579  (0.115492); expected 273.4 (0.02)
Passed bias filter:                      651  (0.0476156); expected 273.4 (0.02)
Passed Vit filter:                        64  (0.0046811); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 797.05
//
Query:       MMETSP1325-20131115|14760_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       223  (0.0163107); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.35s 00:00:00.64 Elapsed: 00:00:00.52
# Mc/sec: 267.29
//
Query:       MMETSP1325-20131115|14752_1  [L=413]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-16   59.9   0.0    2.6e-16   59.2   0.0    1.4  1  PF13877.1  Potential Monad-binding region of RPAP3
    1.2e-14   53.6   0.9    1.2e-14   53.6   0.6    2.4  2  PF13414.1  TPR repeat
    3.5e-08   33.7  11.7      1e-06   29.1   0.6    3.8  3  PF13432.1  Tetratricopeptide repeat
    2.3e-07   30.0   1.2     0.0085   15.8   0.0    3.2  3  PF07719.12 Tetratricopeptide repeat
    1.4e-05   24.4   0.1     0.0018   17.6   0.0    2.7  3  PF00515.23 Tetratricopeptide repeat
    4.6e-05   23.1   2.5    9.5e-05   22.1   0.1    2.6  3  PF13431.1  Tetratricopeptide repeat
     0.0013   19.0  19.1      0.039   14.4   0.1    4.7  5  PF13428.1  Tetratricopeptide repeat
     0.0075   15.9   8.3      0.021   14.5   0.2    3.1  4  PF13371.1  Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.096   10.6   0.0       0.13   10.1   0.0    1.1  1  PF12726.2  SEN1 N terminal
       0.11   12.2   0.0         15    5.5   0.0    3.1  3  PF13181.1  Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PF13877.1  Potential Monad-binding region of RPAP3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.0   1.9e-19   2.6e-16       2      93 ..     275     366 ..     274     367 .. 0.98

  Alignments for each domain:
  == domain 1    score: 59.2 bits;  conditional E-value: 1.9e-19
    PF13877.1   2 kapknayeFerawkelskskeeryeyLlnippdklpkifkssldpdlLsdilkalnehlktkdeelvleiLeeLskvkrFdlalmflsksek 93 
                   apk  ye+er+w+ +++++ + ++yL+  + ++++k+f++s  pd+L +++ a++ehl t+d++++  +L++++k + F+++ m+l +++k
  MMETSP1325-20131115|14752_1 275 AAPKAMYELERVWRDIKHDSALVAQYLKLFKATTFKKVFNESTNPDILPSFFVAVSEHLATDDPAAATRVLKSIAKRDGFAMTRMLLTETDK 366
                  58**************************************************************************************9998 PP

>> PF13414.1  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.6   8.5e-18   1.2e-14       2      65 ..      63     125 ..      62     129 .. 0.94
   2 ?   -0.4   0.2      0.59     8e+02      20      34 ..     158     172 ..     133     192 .. 0.55

  Alignments for each domain:
  == domain 1    score: 53.6 bits;  conditional E-value: 8.5e-18
    PF13414.1   2 nAealkelGnalfkegdydeAieayekAleldpnnaelyynlAlaylklgkdyeeAledyekAl 65 
                   +ea+k +Gn++++++d++ A+ +y++A++ldp+n  +y+n+Al+ lk   ++ eA++d++ ++
  MMETSP1325-20131115|14752_1  63 SSEAAKVMGNEALTAKDFATAETHYTEAIRLDPSNLAAYNNRALVMLKTK-RWAEARADATAVI 125
                  67999*******************************************96.78*******9887 PP

  == domain 2    score: -0.4 bits;  conditional E-value: 0.59
    PF13414.1  20 deAieayekAleldp 34 
                  + A + ++  l+ +p
  MMETSP1325-20131115|14752_1 158 AMAAADLRGLLKAEP 172
                  334444444445555 PP

>> PF13432.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.6   7.5e-10     1e-06       4      59 ..      71     126 ..      69     132 .. 0.86
   2 !    7.6   1.9    0.0039       5.4      12      40 ..     156     184 ..     153     203 .. 0.87
   3 ?   -0.9   0.0       1.9   2.5e+03      11      27 ..     336     352 ..     330     363 .. 0.58

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 7.5e-10
    PF13432.1   4 ArallraGdydeAlaaleaalalaPeaaeallllaeallrlgrldeAaallraala 59 
                  ++++l a+d++ A+ ++ +a++l+P +  a+ ++a + l+ +r++eA+a   a ++
  MMETSP1325-20131115|14752_1  71 GNEALTAKDFATAETHYTEAIRLDPSNLAAYNNRALVMLKTKRWAEARADATAVID 126
                  799********************************************954444433 PP

  == domain 2    score: 7.6 bits;  conditional E-value: 0.0039
    PF13432.1  12 dydeAlaaleaalalaPeaaeallllaea 40 
                   ++ A+a l+ +l+++P +a a+ lla +
  MMETSP1325-20131115|14752_1 156 GLAMAAADLRGLLKAEPSNAAAQKLLAKL 184
                  56669*********************986 PP

  == domain 3    score: -0.9 bits;  conditional E-value: 1.9
    PF13432.1  11 GdydeAlaaleaalala 27 
                   d+++A ++l+ + +++
  MMETSP1325-20131115|14752_1 336 DDPAAATRVLKSIAKRD 352
                  34555555555555554 PP

>> PF07719.12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   6.2e-06    0.0085       6      34 .]      69      97 ..      64      97 .. 0.89
   2 !   11.7   0.1   0.00013      0.17       3      27 ..     100     124 ..      98     127 .. 0.89
   3 ?   -1.9   0.0       2.8   3.8e+03       5      13 ..     142     150 ..     139     152 .. 0.75

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 6.2e-06
                 HHHHHHHHTT-HHHHHHHHHHHHHH-TTS CS
   PF07719.12  6 nlGlayyklgdyeeAleafekAleldPnn 34
                  +G+ ++ ++d++ A+ ++ +A++ldP n
  MMETSP1325-20131115|14752_1 69 VMGNEALTAKDFATAETHYTEAIRLDPSN 97
                 579999999******************87 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 0.00013
                  HHHHHHHHHHHTT-HHHHHHHHHHH CS
   PF07719.12   3 alynlGlayyklgdyeeAleafekA 27 
                  a++n++l+ +k ++++eA+++   +
  MMETSP1325-20131115|14752_1 100 AYNNRALVMLKTKRWAEARADATAV 124
                  8******************987765 PP

  == domain 3    score: -1.9 bits;  conditional E-value: 2.8
                  HHHHHHHHH CS
   PF07719.12   5 ynlGlayyk 13 
                  +++++ay+ 
  MMETSP1325-20131115|14752_1 142 FRRAQAYEG 150
                  899999976 PP

>> PF00515.23  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.3e-06    0.0018       7      34 .]      70      97 ..      64      97 .. 0.92
   2 ?    3.8   0.0      0.03        41       3      23 ..     100     120 ..      99     126 .. 0.88
   3 ?   -3.5   0.0         6   8.3e+03       5      12 ..     142     149 ..     139     151 .. 0.76

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.3e-06
                 HHHHHHHTT-HHHHHHHHHHHHHHHTTH CS
   PF00515.23  7 lGnaylklgkydeAleyyekALelnPnn 34
                 +Gn  l  +++  A+ +y +A++l+P+n
  MMETSP1325-20131115|14752_1 70 MGNEALTAKDFATAETHYTEAIRLDPSN 97
                 899999********************98 PP

  == domain 2    score: 3.8 bits;  conditional E-value: 0.03
                  HHHHHHHHHHHTT-HHHHHHH CS
   PF00515.23   3 alynlGnaylklgkydeAley 23 
                  a++n++++ lk +++ eA ++
  MMETSP1325-20131115|14752_1 100 AYNNRALVMLKTKRWAEARAD 120
                  9****************9876 PP

  == domain 3    score: -3.5 bits;  conditional E-value: 6
                  HHHHHHHH CS
   PF00515.23   5 ynlGnayl 12 
                  +++++ay 
  MMETSP1325-20131115|14752_1 142 FRRAQAYE 149
                  68899985 PP

>> PF13431.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       9.9   1.4e+04       9      32 ..      60      83 ..      60      84 .. 0.64
   2 !   22.1   0.1     7e-08   9.5e-05       1      34 []      86     119 ..      86     119 .. 0.96
   3 ?   -0.8   0.0       1.5   2.1e+03       6      22 ..     168     184 ..     165     190 .. 0.84

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 9.9
    PF13431.1  9 dPnnadaynnLAelllnnGdleeA 32
                 +P++++a   +++  l ++d+++A
  MMETSP1325-20131115|14752_1 60 NPESSEAAKVMGNEALTAKDFATA 83
                 688888776666666666666666 PP

  == domain 2    score: 22.1 bits;  conditional E-value: 7e-08
    PF13431.1   1 lyekaleldPnnadaynnLAelllnnGdleeAeq 34 
                  +y +a++ldP n  aynn+A++ l+ ++++eA++
  MMETSP1325-20131115|14752_1  86 HYTEAIRLDPSNLAAYNNRALVMLKTKRWAEARA 119
                  69******************************95 PP

  == domain 3    score: -0.8 bits;  conditional E-value: 1.5
    PF13431.1   6 leldPnnadaynnLAel 22 
                  l+ +P na a   LA+l
  MMETSP1325-20131115|14752_1 168 LKAEPSNAAAQKLLAKL 184
                  7899****999888876 PP

>> PF13428.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   2.9e-05     0.039       7      42 ..      70     105 ..      64     109 .. 0.83
   2 ?    3.7   0.5     0.083   1.1e+02       2      35 ..      99     131 ..      98     142 .. 0.80
   3 !   11.3   2.5    0.0003       0.4       3      44 .]     140     184 ..     138     184 .. 0.85
   4 ?    1.7   0.0      0.37     5e+02      11      31 ..     332     352 ..     327     363 .. 0.81
   5 ?   -3.6   0.1        10   1.4e+04      29      38 ..     379     388 ..     372     391 .. 0.70

  Alignments for each domain:
  == domain 1    score: 14.4 bits;  conditional E-value: 2.9e-05
    PF13428.1   7 larallalGdpdeAiallrralalaPddaealllLa 42 
                  +++  l + d++ A+ ++ +a++l+P++++a+ + a
  MMETSP1325-20131115|14752_1  70 MGNEALTAKDFATAETHYTEAIRLDPSNLAAYNNRA 105
                  56667899**********************996554 PP

  == domain 2    score: 3.7 bits;  conditional E-value: 0.083
    PF13428.1   2 eallalarallalGdpdeAiallrralalaPdda 35 
                  +a+  +a ++l   +++eA+a + +++  aPd a
  MMETSP1325-20131115|14752_1  99 AAYNNRALVMLKTKRWAEARADATAVID-APDTA 131
                  78999****************9888876.67755 PP

  == domain 3    score: 11.3 bits;  conditional E-value: 0.0003
    PF13428.1   3 allalarallalGd...pdeAiallrralalaPddaealllLarl 44 
                  a  ++a+a++  G    ++ A+a lr +l++ P++a+a++lLa+l
  MMETSP1325-20131115|14752_1 140 ATFRRAQAYEGEGTrggLAMAAADLRGLLKAEPSNAAAQKLLAKL 184
                  77899999997665444888***********************86 PP

  == domain 4    score: 1.7 bits;  conditional E-value: 0.37
    PF13428.1  11 llalGdpdeAiallrralala 31 
                  +la  dp++A ++l+ +++++
  MMETSP1325-20131115|14752_1 332 HLATDDPAAATRVLKSIAKRD 352
                  78899**********998776 PP

  == domain 5    score: -3.6 bits;  conditional E-value: 10
    PF13428.1  29 alaPddaeal 38 
                  +laPd a+++
  MMETSP1325-20131115|14752_1 379 ELAPDAAAIR 388
                  5678877766 PP

>> PF13371.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.2   1.5e-05     0.021       6      60 ..      75     129 ..      73     142 .. 0.85
   2 !    5.7   0.1    0.0089        12      45      72 ..     157     184 ..     153     185 .. 0.88
   3 ?   -3.0   0.0       4.4     6e+03       5      21 ..     332     348 ..     332     350 .. 0.74
   4 ?   -3.9   0.1       8.5   1.2e+04      62      70 ..     381     389 ..     374     390 .. 0.68

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 1.5e-05
    PF13371.1   6 lreedferALavverllllaPddpyerRDrGlllaqlgclaaAaedLeaflelcp 60 
                  l ++df+ A   +   ++l+P  +  +  r+l+  ++ ++a+A++d +a ++  +
  MMETSP1325-20131115|14752_1  75 LTAKDFATAETHYTEAIRLDPSNLAAYNNRALVMLKTKRWAEARADATAVIDAPD 129
                  56789999999999999******************************99997655 PP

  == domain 2    score: 5.7 bits;  conditional E-value: 0.0089
    PF13371.1  45 laaAaedLeaflelcpdapdaeliraql 72 
                  la Aa+dL++ l+ +p+  +a+++ a l
  MMETSP1325-20131115|14752_1 157 LAMAAADLRGLLKAEPSNAAAQKLLAKL 184
                  678******************9998876 PP

  == domain 3    score: -3.0 bits;  conditional E-value: 4.4
    PF13371.1   5 ylreedferALavverl 21 
                  +l  +d+++A +v+ ++
  MMETSP1325-20131115|14752_1 332 HLATDDPAAATRVLKSI 348
                  56778888888887765 PP

  == domain 4    score: -3.9 bits;  conditional E-value: 8.5
    PF13371.1  62 apdaelira 70 
                  apda++ir+
  MMETSP1325-20131115|14752_1 381 APDAAAIRE 389
                  566666665 PP

>> PF12726.2  SEN1 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   9.4e-05      0.13     404     470 ..     283     353 ..     255     375 .. 0.83

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 9.4e-05
    PF12726.2 404 lkviskalaldiltlaqeskallkg..kteipavs..dilsklWkslldallesnlalakslLksllplng 470
                  l+++++ +++d  ++aq  k++++   k++ + ++  dil+++  +++++l ++++a a+ +Lks+++  g
  MMETSP1325-20131115|14752_1 283 LERVWRDIKHDSALVAQYLKLFKATtfKKVFNESTnpDILPSFFVAVSEHLATDDPAAATRVLKSIAKRDG 353
                  6789999******9999999999997744444444679****************************98766 PP

>> PF13181.1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.011        15      14      33 ..      77      97 ..      70      98 .. 0.86
   2 ?    3.1   0.0     0.065        88       2      22 ..      99     119 ..      98     127 .. 0.88
   3 ?   -2.4   0.0       3.7   5.1e+03      12      24 ..     364     376 ..     360     376 .. 0.80

  Alignments for each domain:
  == domain 1    score: 5.5 bits;  conditional E-value: 0.011
                 TT-HHHHHHHHH---HHHH.. CS
    PF13181.1 14 lGdydkAkeylekalelkp.r 33
                  +d+  A+ ++ +a+ l+p +
  MMETSP1325-20131115|14752_1 77 AKDFATAETHYTEAIRLDPsN 97
                 589999************944 PP

  == domain 2    score: 3.1 bits;  conditional E-value: 0.065
                  --TTT---HHHHTT-HHHHHH CS
    PF13181.1   2 kayynlGdiYrqlGdydkAke 22 
                  +ay+n+++++++++++ +A +
  MMETSP1325-20131115|14752_1  99 AAYNNRALVMLKTKRWAEARA 119
                  68***************9976 PP

  == domain 3    score: -2.4 bits;  conditional E-value: 3.7
                  HHTT-HHHHHHHH CS
    PF13181.1  12 rqlGdydkAkeyl 24 
                   ++G ++kA e+l
  MMETSP1325-20131115|14752_1 364 TDKGHISKACEAL 376
                  5899999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       690  (0.0504681); expected 273.4 (0.02)
Passed bias filter:                      347  (0.0253803); expected 273.4 (0.02)
Passed Vit filter:                        43  (0.00314511); expected 13.7 (0.001)
Passed Fwd filter:                        10  (0.000731422); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.79u 0.38s 00:00:01.17 Elapsed: 00:00:00.54
# Mc/sec: 1832.77
//
Query:       MMETSP1325-20131115|14761_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   11.5   0.4       0.16   11.2   0.3    1.1  1  PF00902.13 Sec-independent protein translocase protein (TatC)


Domain annotation for each model (and alignments):
>> PF00902.13  Sec-independent protein translocase protein (TatC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   1.2e-05      0.16     100     132 ..       5      37 ..       2      51 .. 0.89

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.2e-05
   PF00902.13 100 vlpfllaslllfllGaafayfvvlPlvleflls 132
                  ++  ++a+++ f+ G+++++f  lP + +f+++
  MMETSP1325-20131115|14761_1   5 IFSSTIAAVVGFFHGILLGWFQALPCTPNFFIT 37 
                  677899*************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       526  (0.0384728); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.39s 00:00:00.77 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|14759_1  [L=147]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-25   86.9   3.9      9e-25   86.4   2.7    1.2  1  PF01777.13 Ribosomal L27e protein family
    2.4e-05   23.5   0.3    5.2e-05   22.5   0.2    1.6  1  PF00467.24 KOW motif


Domain annotation for each model (and alignments):
>> PF01777.13  Ribosomal L27e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.4   2.7   1.3e-28     9e-25       1      85 []      54     147 .]      54     147 .] 0.96

  Alignments for each domain:
  == domain 1    score: 86.4 bits;  conditional E-value: 1.3e-28
   PF01777.13   1 kVtkkmskkkiakrskvkpFvKvvnynHlmpTRysvdledlkkvvskdalkdaekrkearkevkkkleery...........kagknkwffkkLrf 85 
                  k+tk m+kkki+krs +kpFvK vn++HlmpTRy+ d+ dlkkvv++  lkd++   ++rkev+k++ e+y           ka+  ++f+kkLrf
  MMETSP1325-20131115|14759_1  54 KITKGMDKKKIEKRSLIKPFVKHVNLTHLMPTRYQCDF-DLKKVVEEG-LKDQSGNGTMRKEVRKVFSEKYlgqstaklsekKATGLNYFYKKLRF 147
                  9*************************************.99**99965.******************************998888889999****9 PP

>> PF00467.24  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.2   7.6e-09   5.2e-05       2      26 ..      10      34 ..       9      46 .. 0.88

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 7.6e-09
                 TBEEEE-----TT-EEEEEEEETTT CS
   PF00467.24  2 GdyVrvisGpfkGrpGkvvevdrsk 26
                 G++V+ ++G+++Gr+++vv+  +++
  MMETSP1325-20131115|14759_1 10 GKVVVLLQGRYAGRKAVVVKTHDDG 34
                 99******************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       357  (0.0261118); expected 273.4 (0.02)
Passed bias filter:                      297  (0.0217232); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 749.50
//
Query:       MMETSP1325-20131115|14766_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       364  (0.0266238); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.36s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 686.96
//
Query:       MMETSP1325-20131115|14770_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       248  (0.0181393); expected 273.4 (0.02)
Passed bias filter:                      220  (0.0160913); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 400.93
//
Query:       MMETSP1325-20131115|14773_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.46
# Mc/sec: 349.03
//
Query:       MMETSP1325-20131115|14776_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       162  (0.011849); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 386.08
//
Query:       MMETSP1325-20131115|14778_1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-19   68.7   0.0    2.7e-19   68.6   0.0    1.0  1  PF03028.10 Dynein heavy chain and region D6 of dynein motor


Domain annotation for each model (and alignments):
>> PF03028.10  Dynein heavy chain and region D6 of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.6   0.0   1.9e-23   2.7e-19      89     169 ..       2      79 ..       1      81 [] 0.97

  Alignments for each domain:
  == domain 1    score: 68.6 bits;  conditional E-value: 1.9e-23
   PF03028.10  89 nfveeklgekfvesqeldlskiveessastpilfilspGvDplkkveklakklgieekkltsvslGqgqgviAekaieeaa 169
                  +fv++++ ek+v+++++dl+  +++s++ tp++fils G+Dp+++++  a+++g   k++  +slGqgqg+iAe++i++a 
  MMETSP1325-20131115|14778_1   2 DFVCDVMTEKYVKPPSFDLTACLNDSTCVTPLVFILSDGADPMASIQVAAESNG---KEFDAMSLGQGQGPIAEAKIKKAC 79 
                  7*****************************************************...99*******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.54
# Mc/sec: 359.45
//
Query:       MMETSP1325-20131115|14782_1  [L=95]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       529  (0.0386922); expected 273.4 (0.02)
Passed bias filter:                      381  (0.0278672); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.43s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 437.80
//
Query:       MMETSP1325-20131115|14786_1  [L=262]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-49  168.4   0.0    1.3e-49  168.0   0.0    1.1  1  PF01725.11 Ham1 family


Domain annotation for each model (and alignments):
>> PF01725.11  Ham1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.0   0.0   9.3e-54   1.3e-49       1     189 []      58     240 ..      58     240 .. 0.94

  Alignments for each domain:
  == domain 1    score: 168.0 bits;  conditional E-value: 9.3e-54
   PF01725.11   1 lvlatgNkgKlkEikailkklkievvsleeleeakieveEtgetfeenallKakaaakalgkpvlaDDsgLevdaLngaPGvysarfageeatdeannekllkelkgledrkakfvcvialad.pdgkvevfeGeveGeiaeeprgeggfGYDpiFip.egegktfAelsaeeknkiShRakAlrkllell 189
                  l+++tgN++Kl+E+++il++ +  +  +  l ++k++++E + + ee+a++K++ aa  +g pv+ +D+ L+++aL+g+PG+y+++f+     ++ + ++l ++l+++ed++a+++c++al   p  +v++f G+++G+i    rg   fG+Dp+F p e+ g+t+Ae+++++kn+iShR +Al+ l+++l
  MMETSP1325-20131115|14786_1  58 LTFVTGNAKKLEEVTRILSSGE--TAFPFPLTNTKLDLPELQGESEEIAIEKCRLAAIEAGGPVMCEDTNLCFNALGGLPGPYIKWFL-----QKCGHDGLNNMLAAYEDKSAYAQCIFALSAgPGAEVHIFDGRTQGKI-VPARGPLDFGWDPVFEPdESDGQTYAEMTKDAKNAISHRYRALNSLRTWL 240
                  689****************975..45588899999******8888*******************************************.....99***************************977777************.699**************6666************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       443  (0.032402); expected 273.4 (0.02)
Passed bias filter:                      400  (0.0292569); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.37s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 1335.84
//
Query:       MMETSP1325-20131115|14792_1  [L=211]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       320  (0.0234055); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.40s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 1011.26
//
Query:       MMETSP1325-20131115|14796_1  [L=50]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        96  (0.00702165); expected 273.4 (0.02)
Passed bias filter:                       93  (0.00680222); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.37s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 226.07
//
Query:       MMETSP1325-20131115|14800_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-25   89.3   0.0    2.8e-25   89.2   0.0    1.0  1  PF00450.17 Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> PF00450.17  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.0     2e-29   2.8e-25     301     418 .]       3     118 ..       1     118 [. 0.94

  Alignments for each domain:
  == domain 1    score: 89.2 bits;  conditional E-value: 2e-29
                  S--S--HHHHHT---TT.S-TCHHHHHHHHTT--EEEEE----STT-----HHHHCC--STTHHHHHHS--BBTT-SB---EEEE...TTEEEEE-------HHHH-HHHHHHHHHHHH-- CS
   PF00450.17 301 eweecndevfeqtgddvsksveeilekllesglrvliysGdvDlicnflgteawikklnlsgkkefrpwevsledgqvaGyvkey...rnltfltvkgaGHmvpedqPeaalqmikrflsg 418
                  +w  c +++    +  +++++  +   ll++++rvliy+Gd D +++++ +eaw++ +++  k+++++w++  + +qv+Gy + y   +++tf+tv+g+ H+vpe qPe+a+++++ fl+g
  MMETSP1325-20131115|14800_1   3 DWAICGNQI---DYSSTRPNLPRDTYPLLNEHIRVLIYNGDWDACVPYTDNEAWTEGMGYAAKDSWHAWTY--NGQQVGGYATVYdtpHDFTFITVRGGRHEVPETQPERAMAFFTMFLEG 118
                  699999977...6789999****************************************************..6***********66555**************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 568.55
//
Query:       MMETSP1325-20131115|14803_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-14   51.7   0.1    9.2e-14   51.5   0.1    1.0  1  PF01014.13 Uricase


Domain annotation for each model (and alignments):
>> PF01014.13  Uricase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.1   6.8e-18   9.2e-14      54     132 ..       3      75 ..       1      81 [. 0.84

  Alignments for each domain:
  == domain 1    score: 51.5 bits;  conditional E-value: 6.8e-18
   PF01014.13  54 vatdvkkntvyvfakkneesesvekflyklgkhflekyphveevhvsipnkhwervdlsikGlkkphkhafvftptekp 132
                  ++t+++knt+yv a + e   s e++++ l++ +l++++h+e v++si++++w r  +   G +  h+h f++  +++p
  MMETSP1325-20131115|14803_1   3 LPTETQKNTCYVNALNAE-YDSSEQYGLALARDILDRHSHIEVVNLSIEERPWNR-VVTSSGAE--HNHVFMK--PKDP 75 
                  789***********8877.************************************.45667844..7666644..3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       242  (0.0177004); expected 273.4 (0.02)
Passed bias filter:                      236  (0.0172616); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.37s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 425.48
//
Query:       MMETSP1325-20131115|14809_1  [L=83]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        77  (0.00563195); expected 273.4 (0.02)
Passed bias filter:                       76  (0.00555881); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.36s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 375.28
//
Query:       MMETSP1325-20131115|14813_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.041   13.5   0.1       0.12   11.9   0.1    1.6  1  PF06648.6  Protein of unknown function (DUF1160)
      0.089   12.3   0.0       0.14   11.7   0.0    1.6  1  PF05361.7  PKC-activated protein phosphatase-1 inhibitor
       0.11   10.6   0.0       0.14   10.3   0.0    1.4  1  PF01039.17 Carboxyl transferase domain


Domain annotation for each model (and alignments):
>> PF06648.6  Protein of unknown function (DUF1160)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   2.7e-05      0.12       4      81 ..      12      96 ..      10     100 .. 0.76

  Alignments for each domain:
  == domain 1    score: 11.9 bits;  conditional E-value: 2.7e-05
    PF06648.6  4 qlvkstpvvaKVavvntelkkylkelerdetfrkklvkvlkm....F...iereievediyeiveavdgikLtkkQidylvkqvy 81
                  +++  p  +K  +++   k  +k +e d+ f++ lv  l +          ++ +v++i+++  a+d+  +++ Q++ +++ ++
  MMETSP1325-20131115|14813_1 12 TMAEAKPSGTKHLTAKYDFKALQKIMEIDDAFKEDLVPFLGVedvdAlpeAVENFDVNEICNVESATDAFAMSRAQMEEVLCGIV 96
                 5777888899999999999999999999****999998876522222111345778999999999***********986666554 PP

>> PF05361.7  PKC-activated protein phosphatase-1 inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     3e-05      0.14      28      63 ..      16      51 ..       1     124 [. 0.68

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 3e-05
                 XXXSXSS----S--SSSCCHCCHHHHCC---CCCC- CS
    PF05361.7 28 elqkrqarvtvkYnRkeLqrrLdvEkWideqldeLy 63
                      + ++t kY+ k Lq+ ++++    e l    
  MMETSP1325-20131115|14813_1 16 AKPSGTKHLTAKYDFKALQKIMEIDDAFKEDLVPFL 51
                 334445689***************987777665443 PP

>> PF01039.17  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   3.1e-05      0.14     182     221 ..       5      44 ..       2     104 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.3 bits;  conditional E-value: 3.1e-05
                  STCCG---HCCCCT----SEEESSCCHHHHHHHHHHCTS- CS
   PF01039.17 182 tseelgGadqhmaksGvahltaeddeealelirkllsylp 221
                   s++  G    ++ sG+ hlta+ d++al++i+++ + + 
  MMETSP1325-20131115|14813_1   5 RSQSNVGTMAEAKPSGTKHLTAKYDFKALQKIMEIDDAFK 44 
                  5778889999999*********************988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       340  (0.0248683); expected 273.4 (0.02)
Passed bias filter:                      325  (0.0237712); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.33s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 624.05
//
Query:       MMETSP1325-20131115|14817_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       113  (0.00826507); expected 273.4 (0.02)
Passed bias filter:                       96  (0.00702165); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.36s 00:00:00.64 Elapsed: 00:00:00.47
# Mc/sec: 183.55
//
Query:       MMETSP1325-20131115|14818_1  [L=143]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       233  (0.0170421); expected 273.4 (0.02)
Passed bias filter:                      221  (0.0161644); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.51
# Mc/sec: 671.92
//
Query:       MMETSP1325-20131115|14833_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-14   52.8   0.0      3e-14   52.6   0.0    1.0  1  PF00443.24 Ubiquitin carboxyl-terminal hydrolase
     0.0031   16.8   0.0     0.0036   16.6   0.0    1.0  1  PF13423.1  Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> PF00443.24  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   4.4e-18     3e-14     214     261 ..       7      54 ..       2      60 .. 0.93

  Alignments for each domain:
  == domain 1    score: 52.6 bits;  conditional E-value: 4.4e-18
                  SCEEEEEEEEEE---TT---EEEEEESS-TT-EEEEETTEEEEE-HHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   PF00443.24 214 pkkYeLvavvvHsGslssGHYvayvknneknkWlkfdDetvtevkeee 261
                  +++YeL+++ +H+Gs+ sGHY+ay+k++  ++Wl+f+D +vte+++++
  MMETSP1325-20131115|14833_1   7 EHNYELISICMHIGSALSGHYFAYIKESGTGRWLNFNDANVTELEQSQ 54 
                  789*****************************************9875 PP

>> PF13423.1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   5.3e-07    0.0036     251     294 ..       6      46 ..       2      50 .. 0.89

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 5.3e-07
    PF13423.1 251 gefkyeLqavVchigdsltsghlvSlirvaeseksqWylFnDfr 294
                  ge +yeL ++  hig+   sgh+ ++i+ +     +W  FnD  
  MMETSP1325-20131115|14833_1   6 GEHNYELISICMHIGS-ALSGHYFAYIKES--GTGRWLNFNDAN 46 
                  6789************.99**********6..7779******65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       178  (0.0130193); expected 273.4 (0.02)
Passed bias filter:                      176  (0.012873); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 311.53
//
Query:       MMETSP1325-20131115|14834_1  [L=87]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       241  (0.0176273); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.38s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 400.93
//
Query:       MMETSP1325-20131115|14835_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.3   0.0      0.021   14.8   0.0    1.3  1  PF12171.3 Zinc-finger double-stranded RNA-binding


Domain annotation for each model (and alignments):
>> PF12171.3  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.6e-06     0.021      10      27 .]      15      32 ..      13      32 .. 0.93

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 1.6e-06
                 B-SSHHHHHHHTT-HHHH CS
    PF12171.3 10 yFksenqlknHlksKkHK 27
                  F++++ql +H+ks +H+
  MMETSP1325-20131115|14835_1 15 EFTDRAQLNEHYKSEWHR 32
                 69***************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       295  (0.0215769); expected 273.4 (0.02)
Passed bias filter:                      264  (0.0193095); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 339.11
//
Query:       MMETSP1325-20131115|14829_1  [L=357]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-29  100.8  12.1    2.4e-15   56.2   0.4    2.5  3  PF14308.1  X-domain of DnaJ-containing
     0.0024   17.2   0.1     0.0043   16.4   0.1    1.4  1  PF02037.22 SAP domain
  ------ inclusion threshold ------
       0.14   12.4   2.1        3.3    8.0   0.3    2.5  2  PF11304.3  Protein of unknown function (DUF3106)


Domain annotation for each model (and alignments):
>> PF14308.1  X-domain of DnaJ-containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   1.7   1.8e-17   8.2e-14      29     161 ..       3     155 ..       1     161 [. 0.83
   2 !   56.2   0.4   5.2e-19   2.4e-15     116     197 ..     172     256 ..     155     263 .. 0.80
   3 ?   -1.6   0.1      0.26   1.2e+03     108     119 ..     283     294 ..     247     313 .. 0.44

  Alignments for each domain:
  == domain 1    score: 51.2 bits;  conditional E-value: 1.8e-17
    PF14308.1  29 FkeklekeieeLkeesFglellhtIGkvYenkAnaflgksktflglsgifasvkekgksvkstfsalssaldaqksmeemekeeeee........geeteee.laemeekvtg...........kilaaawaiskfdiestlrkvCdkvLkDk 161
                  F e + ke++e++ + +g  l+h++G+ Y+ +A+ +lg +++ lg+ g +as+k+ +++  + ++++s +++  +++++m++ +ee+        + ++eee  a++e+ +t              l++   + k di ++l    +k+++Dk
  MMETSP1325-20131115|14829_1   3 FGEFVAKEVAEMSRSTYGEPLMHAVGSAYTLQAQIHLGYNESLLGIDGAIASMKQSTRQKGQYYEVASKGYKSFSAVKSMSELAEEAkmeavkelEPPSEEElAAKYESYMTLsakelrgmckeRELDTTGCLEKADIAKVLMAHDQKLFHDK 155
                  6677899*****************************************************************999999999998888666776654445555345555555556666665554449999999999999999999999999987 PP

  == domain 2    score: 56.2 bits;  conditional E-value: 5.2e-19
    PF14308.1 116 geeteeelaemeekvtgkilaaawaiskfdiestlrkvCdkvLkDksvdkktRikRAeaLkilGkifqkvkrs.ke..eeeeakr 197
                  + e +++++  +e++++ +l++++a s++d+e tl+ +  kvL D sv+k++R +RA ++++lG+++ ++k + +   +e eak+
  MMETSP1325-20131115|14829_1 172 SPEAQKKMQDAMEESLPTFLETMVAASLLDVEVTLKAAGGKVLADTSVTKEVRARRARGMLMLGRAMLSAKGAtPAarGEIEAKN 256
                  346677788889999999**************************************************99876443224444444 PP

  == domain 3    score: -1.6 bits;  conditional E-value: 0.26
    PF14308.1 108 mekeeeeegeet 119
                  + +++e+e  ++
  MMETSP1325-20131115|14829_1 283 IHNQAEREAADE 294
                  112222222223 PP

>> PF02037.22  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   9.4e-07    0.0043       1      22 [.     112     133 ..     112     140 .. 0.94

  Alignments for each domain:
  == domain 1    score: 16.4 bits;  conditional E-value: 9.4e-07
                  HTT--HHHHHHHHHHTT----- CS
   PF02037.22   1 lskltVaeLKaeLkkrGLptsG 22 
                  +++l+ +eL+ ++k+r L+t+G
  MMETSP1325-20131115|14829_1 112 YMTLSAKELRGMCKERELDTTG 133
                  789******************9 PP

>> PF11304.3  Protein of unknown function (DUF3106)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.3   0.00071       3.3      67     100 ..      87     120 ..      52     127 .. 0.78
   2 ?    3.2   0.0     0.022     1e+02      40      55 ..     170     185 ..     164     187 .. 0.91

  Alignments for each domain:
  == domain 1    score: 8.0 bits;  conditional E-value: 0.00071
    PF11304.3  67 arenykktkklspeekealrekweayqaLseeek 100
                    ++++++k+l p + e+l +k+e y +Ls +e 
  MMETSP1325-20131115|14829_1  87 EEAKMEAVKELEPPSEEELAAKYESYMTLSAKEL 120
                  456788999**9999999***********99875 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.022
    PF11304.3  40 klspeeqkrlkermee 55 
                  ++spe qk++++ mee
  MMETSP1325-20131115|14829_1 170 EMSPEAQKKMQDAMEE 185
                  69**********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       862  (0.0630486); expected 273.4 (0.02)
Passed bias filter:                      335  (0.0245026); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.38s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 1500.88
//
Query:       MMETSP1325-20131115|14836_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       273  (0.0199678); expected 273.4 (0.02)
Passed bias filter:                      262  (0.0191633); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.40s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 630.88
//
Query:       MMETSP1325-20131115|14839_1  [L=45]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                      127  (0.00928906); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.37s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 207.38
//
Query:       MMETSP1325-20131115|14849_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       245  (0.0179198); expected 273.4 (0.02)
Passed bias filter:                      228  (0.0166764); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 513.51
//
Query:       MMETSP1325-20131115|14851_1  [L=46]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (46 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        86  (0.00629023); expected 273.4 (0.02)
Passed bias filter:                       83  (0.0060708); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.39s 00:00:00.69 Elapsed: 00:00:00.53
# Mc/sec: 207.99
//
Query:       MMETSP1325-20131115|14852_1  [L=214]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       352  (0.0257461); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.34s 00:00:00.81 Elapsed: 00:00:00.60
# Mc/sec: 854.70
//
Query:       MMETSP1325-20131115|14848_1  [L=221]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-36  125.3   0.0    3.4e-36  124.7   0.0    1.2  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.7   0.0   2.5e-40   3.4e-36       5     154 ..      65     208 ..      61     210 .. 0.86

  Alignments for each domain:
  == domain 1    score: 124.7 bits;  conditional E-value: 2.5e-40
                  XXXXXXXXXXXXXXXX.----TTTTT--------TTT------------------S--TT--..STT.-------S-TT.THHHH---HHHHHHHHTT-----------------------------------STTT----TTTTT------ CS
   PF00504.16   5 ldgslpgdlgfDplglskdptlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpa.wae.agglslptllalqillligflelareqelkapesegsekraypGglgfdplglakdeeekaelklkEiknGRlAMiaflgfvvq 154
                    g + gd+gfDplgl++  ++k+lreaEl+HGRvAMla++G++++e++ +l++  +  + p+ +++ a+   +  +++ qi+l+ gf+e+  + ++ + e++ + k  +pG+ gfdpl+l  +e + +e++lkEi+++RlAMia+ g+++q
  MMETSP1325-20131115|14848_1  65 AAG-MVGDVGFDPLGLAEYFDIKFLREAELKHGRVAMLAIVGIITQEFF-HLPG--ELYNDPNpITAaAK---VGPQIWGQIILFGGFVEAGIYDGKMQYENMFEDKSRVPGDYGFDPLKLM-KEGDPDEYALKEITHCRLAMIAVGGMIHQ 208
                  456.99**********95558**************************87.5454..33455666444245...8889999************999999999999999*************96.6889999********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      199  (0.0145553); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.35s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 1059.19
//
Query:       MMETSP1325-20131115|14858_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   13.3   1.7       0.12   12.9   1.2    1.1  1  PF09598.5 Stm1


Domain annotation for each model (and alignments):
>> PF09598.5  Stm1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.2   9.1e-06      0.12      12      47 ..       5      41 ..       3      50 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 9.1e-06
    PF09598.5 12 eDpsrvpspptkelvkksttskkrdkp.kaPnkpaPr 47
                  D+ +++ +pt+ + ++ +++kk+++    P+ p P 
  MMETSP1325-20131115|14858_1  5 TDSTQSANTPTASQLAAVARAKKAQTGnRIPSAPRPH 41
                 599********99999********98899**999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       332  (0.0242832); expected 273.4 (0.02)
Passed bias filter:                      282  (0.0206261); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 350.24
//
Query:       MMETSP1325-20131115|14854_1  [L=259]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00024   21.3   0.0    0.00049   20.3   0.0    1.5  1  PF13426.1  PAS domain
     0.0012   18.5   0.0     0.0024   17.5   0.0    1.6  1  PF00989.19 PAS fold
  ------ inclusion threshold ------
        0.1   11.5   0.0       0.16   11.0   0.0    1.2  1  PF02527.10 rRNA small subunit methyltransferase G


Domain annotation for each model (and alignments):
>> PF13426.1  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.1e-07   0.00049       6      98 ..     120     213 ..     116     215 .. 0.86

  Alignments for each domain:
  == domain 1    score: 20.3 bits;  conditional E-value: 1.1e-07
    PF13426.1   6 ildpdgtilfaNeaalrllGytreevlgksirdlfpededeeavalleraleagge.vevelelrrkdgeefpvevtvtpvrdedgevvgiivi 98 
                  ++d +g ++ +N+ ++++ Gy+ ee+  +++ +l   +e ++  ++l +++++  +  ++ ++lr  +  + p  + + ++r  dg   g +++
  MMETSP1325-20131115|14854_1 120 LADVNGAFTKCNDVFAKVSGYSEEELKRRTLFNLTLTREMNRNMTTLCEMITEDPPeMREGIVLRGVSKHRKPMAIMIQAIRELDGTASGLACC 213
                  578999*************************999999999999999999999777635556777777888889999999999999988887776 PP

>> PF00989.19  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   5.2e-07    0.0024      17      68 ..     121     169 ..     115     216 .. 0.83

  Alignments for each domain:
  == domain 1    score: 17.5 bits;  conditional E-value: 5.2e-07
                  ES----EEEETHHHHHHH-S-HHHHS---CCHHCSCCHCCTCCHHHHHHHHH CS
   PF00989.19  17 vDedgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleq 68 
                   D +g ++ +N+ +++  G+s+ee+ +++l+ l  +    e+++ +++l+e 
  MMETSP1325-20131115|14854_1 121 ADVNGAFTKCNDVFAKVSGYSEEELKRRTLFNLTLTR---EMNRNMTTLCEM 169
                  689****************************999875...588888887765 PP

>> PF02527.10  rRNA small subunit methyltransferase G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.4e-05      0.16      79     140 ..     143     202 ..     142     232 .. 0.90

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 3.4e-05
                  ES-HHHHHHHHHHHHHCT-SSEEEEES-TTTTTTTT-BSEEEEC-SSSHHHHHHHHCCGB-- CS
   PF02527.10  79 eskekkiaFLeelkkelklenveivearaeekqeeekydvitsRAlaslneltelalkllks 140
                  e +++++ F   l++e++ + ++ +++ + e ++ e  + i+ R++++ ++ + ++++ +++
  MMETSP1325-20131115|14854_1 143 EELKRRTLFNLTLTREMNRN-MTTLCEMITE-DPPEMREGIVLRGVSKHRKPMAIMIQAIRE 202
                  56789999999999999988.8889999988.8**********************9997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       521  (0.0381071); expected 273.4 (0.02)
Passed bias filter:                      372  (0.0272089); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.35s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1241.31
//
Query:       MMETSP1325-20131115|14867_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00039   20.0   0.0    0.00047   19.8   0.0    1.2  1  PF12695.2  Alpha/beta hydrolase family
     0.0016   18.2   0.0     0.0016   18.2   0.0    1.2  1  PF12697.2  Alpha/beta hydrolase family
     0.0051   16.1   0.0     0.0052   16.1   0.0    1.0  1  PF02129.13 X-Pro dipeptidyl-peptidase (S15 family)
  ------ inclusion threshold ------
       0.01   15.5   0.0      0.011   15.4   0.0    1.2  1  PF12146.3  Putative lysophospholipase
       0.11   11.0   0.0       0.12   10.9   0.0    1.0  1  PF05677.7  Chlamydia CHLPS protein (DUF818)


Domain annotation for each model (and alignments):
>> PF12695.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.7e-07   0.00047      12      44 ..      33      65 ..      16      69 .. 0.80

  Alignments for each domain:
  == domain 1    score: 19.8 bits;  conditional E-value: 1.7e-07
    PF12695.2 12 ssayeplaealakrgfavvavdlpghgasegaa 44
                 s+  +++ ++++++g++vv+++++g+g+s+g++
  MMETSP1325-20131115|14867_1 33 SHKSNDWIQFYTSMGYQVVLFNYRGYGRSTGTP 65
                 344679***********************9987 PP

>> PF12697.2  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   5.9e-07    0.0016      16      44 ..      38      67 ..       6      70 .] 0.85

  Alignments for each domain:
  == domain 1    score: 18.2 bits;  conditional E-value: 5.9e-07
                 HHHHHH.TTTSEEEEE-----------S.. CS
    PF12697.2 16 plaeaL.aagyrvvapDlpGhGrSdrppdy 44
                  +++++ + gy+vv+++++G+GrS+++p++
  MMETSP1325-20131115|14867_1 38 DWIQFYtSMGYQVVLFNYRGYGRSTGTPSP 67
                 489999557*****************9964 PP

>> PF02129.13  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.9e-06    0.0052      19      77 ..      13      67 ..       6      70 .] 0.74

  Alignments for each domain:
  == domain 1    score: 16.1 bits;  conditional E-value: 1.9e-06
                 SBEEEEEEESS-TTH.HHHHHCTCHHCCH...HHHHC---EEEEEE----TT------T CS
   PF02129.13 19 klPvlltrtpYnksdelaatlasalgekelqdkafvarGYavVvvdvrGtgaSeGeftv 77
                  +P++l  +p     e  + +++++ +     + + + GY vV+ + rG g S+G   +
  MMETSP1325-20131115|14867_1 13 HVPTILFCNPNAGLYECTNASHKSNDWI----QFYTSMGYQVVLFNYRGYGRSTGTPSP 67
                 6899999999885444444444444443....3599*******************9876 PP

>> PF12146.3  Putative lysophospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.0   3.9e-06     0.011      31      59 ..      35      63 ..       9      69 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.9e-06
    PF12146.3 31 rYqelaedLaaqGyavyayDhrGhGkseg 59
                 + ++ ++  +  Gy+v+ + +rG G+s g
  MMETSP1325-20131115|14867_1 35 KSNDWIQFYTSMGYQVVLFNYRGYGRSTG 63
                 556667778889***************98 PP

>> PF05677.7  Chlamydia CHLPS protein (DUF818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.6e-05      0.12     140     188 ..      17      64 ..      11      69 .. 0.78

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 4.6e-05
    PF05677.7 140 lLislGnsdlleeralleskddslkrlakllganilvfnYPGvmsskGe 188
                  +L+ + n  l e     ++k + + ++   +g  +++fnY G  +s+G 
  MMETSP1325-20131115|14867_1  17 ILFCNPNAGLYECTNA-SHKSNDWIQFYTSMGYQVVLFNYRGYGRSTGT 64 
                  5666777777777544.4555566789999*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       260  (0.019017); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|14869_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       302  (0.0220889); expected 273.4 (0.02)
Passed bias filter:                      296  (0.0216501); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 364.25
//
Query:       MMETSP1325-20131115|14876_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       296  (0.0216501); expected 273.4 (0.02)
Passed bias filter:                      257  (0.0187975); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.38s 00:00:00.75 Elapsed: 00:00:00.49
# Mc/sec: 440.15
//
Query:       MMETSP1325-20131115|14881_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.36s 00:00:00.71 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|14885_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-17   62.2   0.0    2.7e-17   62.2   0.0    1.0  1  PF00275.15 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)


Domain annotation for each model (and alignments):
>> PF00275.15  EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2   0.0   1.9e-21   2.7e-17     182     248 ..       5      71 .]       1      71 [] 0.91

  Alignments for each domain:
  == domain 1    score: 62.2 bits;  conditional E-value: 1.9e-21
                  EEEEET.-TTHHHHHHHHHHHHH---EEEE.-STCEEEEE---S.-B--.EEE----TTTHHHHHHHHH CS
   PF00275.15 182 ttiien.lasepeiddtlkmlkkfGakietsgtetsikvkGkqk.klpgveylvegDassAayflaaAa 248
                   ++i++ l+s+p++  t+ +++kfG+k+e++  +++++vkG+qk + pg ++ vegDassA+yfla +a
  MMETSP1325-20131115|14885_1   5 VIEITDeLVSAPYVLLTIGLMEKFGIKVENE-ANKRFTVKGGQKyVTPG-TVFVEGDASSASYFLALGA 71 
                  6788889***********************5.5666********99999.***************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      276  (0.0201872); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 354.46
//
Query:       MMETSP1325-20131115|14886_1  [L=107]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       237  (0.0173347); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.40s 00:00:00.79 Elapsed: 00:00:00.51
# Mc/sec: 502.77
//
Query:       MMETSP1325-20131115|14877_1  [L=410]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-14   52.9   0.0    6.9e-14   52.0   0.0    1.5  1  PF00004.24 ATPase family associated with various cellular activities (AAA)
      1e-05   25.5   0.6     0.0059   16.6   0.4    2.6  1  PF13401.1  AAA domain
    0.00051   19.1   0.3     0.0077   15.3   0.1    2.2  2  PF01078.16 Magnesium chelatase, subunit ChlI
      0.001   18.7   0.0     0.0025   17.4   0.0    1.7  1  PF07728.9  AAA domain (dynein-related subfamily)
     0.0012   19.0   0.0      0.003   17.8   0.0    1.7  1  PF13191.1  AAA ATPase domain
     0.0014   18.1   0.2     0.0034   16.9   0.2    1.6  1  PF13245.1  Part of AAA domain
     0.0016   19.0   3.1     0.0019   18.8   0.6    2.2  2  PF13207.1  AAA domain
     0.0023   17.3   0.3       0.13   11.6   0.2    2.4  1  PF05707.7  Zonular occludens toxin (Zot)
     0.0037   16.9   0.0      0.012   15.3   0.0    1.9  1  PF04851.10 Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.014   15.1   0.1       0.04   13.6   0.0    1.8  1  PF13671.1  AAA domain
      0.015   15.4   1.4      0.024   14.8   0.1    2.1  1  PF13238.1  AAA domain
      0.017   14.2   0.0      0.036   13.1   0.0    1.5  1  PF08433.5  Chromatin associated protein KTI12
      0.019   14.5   0.3      0.048   13.2   0.2    1.8  1  PF03266.10 NTPase
      0.023   13.5   0.8        0.2   10.5   0.6    2.1  1  PF09848.4  Uncharacterized conserved protein (DUF2075)
      0.023   14.5   0.1      0.023   14.5   0.1    2.0  2  PF13521.1  AAA domain
      0.024   13.9   0.0      0.056   12.7   0.0    1.6  1  PF01695.12 IstB-like ATP binding protein
      0.024   13.9   0.0      0.091   12.0   0.0    2.1  2  PF13481.1  AAA domain
      0.025   13.1   0.1      0.052   12.0   0.1    1.5  1  PF10412.4  Type IV secretion-system coupling protein DNA-binding domain
      0.033   13.7   0.2      0.095   12.2   0.0    1.9  2  PF01583.15 Adenylylsulphate kinase
      0.044   13.8   0.0        0.1   12.6   0.0    1.6  1  PF00910.17 RNA helicase
      0.052   13.0   0.0       0.12   11.8   0.0    1.6  1  PF05064.8  Nsp1-like C-terminal region
      0.093   12.0   0.1       0.29   10.4   0.0    1.8  1  PF01656.18 CobQ/CobB/MinD/ParA nucleotide binding domain
       0.15   11.1   1.4       0.43    9.6   0.1    2.5  2  PF12846.2  AAA-like domain
       0.23   10.8   2.2       0.34   10.3   0.1    2.2  2  PF13604.1  AAA domain


Domain annotation for each model (and alignments):
>> PF00004.24  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.0   1.2e-16   6.9e-14       1     131 [.     174     306 ..     174     307 .. 0.84

  Alignments for each domain:
  == domain 1    score: 52.0 bits;  conditional E-value: 1.2e-16
                  EEEE-------HHHHHHHHHHCT.......HEEEEEECCSSSSST-HHHHHHHHHHHHHHHHTS-SEEEEEETGGGC-HHHSS..TTHCHHHHHHHHHHHHHTTTTS.TEEEEEE-SS..GGGS-HHHH.H.TTSCCEEE-- CS
   PF00004.24   1 vllyGppGtGKTllakavakelg.......vefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnr..pdkldpall.r.gRfdrkieie 131
                  ++++G pGtGKT++a  + + l+        +++     +l+ +yvg+++ k++e++k+a  +    +l+iDE++ l ++   ++++ +++ ++ Ll+++++ ++   ++iv++a+++  +d++ + +    +R+  +i ++
  MMETSP1325-20131115|14877_1 174 MCFTGAPGTGKTTVAVRMGQILQrmgycrtGHVVVATRDDLVGQYVGHTAPKTKEVIKKA--MG--GVLLIDEAYYLYNAA--NDRDYGQESIEILLNVMEKQQE---DLIVVLAGYKdrMDRFFSFIPgMsSRIGNHIDFP 306
                  79**************9999985333444577999**********************987..43..8***********999..999*****************99...5899988887667776666654457777777665 PP

>> PF13401.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.4     1e-05    0.0059       5     123 ..     172     280 ..     167     289 .. 0.69

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 1e-05
    PF13401.1   5 gilvvtGesGvGKTtllrrlarqldeeaeaae.karvvfveapastspkellqkllsalglpakgrltteellealqealrrrrtrlliiDEaqrL.....s....eealeelrslldd.etgvklvlvG 123
                   ++++tG +G+GKTt++ r+ + l++        +r+ +v ++      +l   + + +g+ a           +  e++++++ ++l+iDEa +L          +e +e l   +++ + ++ +vl+G
  MMETSP1325-20131115|14877_1 172 LHMCFTGAPGTGKTTVAVRMGQILQR-----MgYCRTGHVVVATRD---DL---VGQYVGHTAP----------KTKEVIKKAMGGVLLIDEAYYLynaanDrdygQESIEILLNVMEKqQEDLIVVLAG 280
                  58999****************98752.....122222233333333...33...3333333333..........46778999999999999999998776515666999999988888899999999988 PP

>> PF01078.16  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   1.3e-05    0.0077      22      49 ..     171     198 ..     155     206 .. 0.83
   2 ?    1.4   0.0      0.24   1.4e+02      91     116 ..     219     244 ..     203     253 .. 0.74

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 1.3e-05
   PF01078.16  22 gHnlllvGppGsGKtmlakrlpsllppl 49 
                  + ++ ++G+pG+GKt +a r+ ++l ++
  MMETSP1325-20131115|14877_1 171 SLHMCFTGAPGTGKTTVAVRMGQILQRM 198
                  45799*******************9876 PP

  == domain 2    score: 1.4 bits;  conditional E-value: 0.24
   PF01078.16  91 vGggskpkpGeislahnGvLfLDElp 116
                  vG  +  ++  i +a  GvL++DE+ 
  MMETSP1325-20131115|14877_1 219 VGHTAPKTKEVIKKAMGGVLLIDEAY 244
                  34444555566889**********85 PP

>> PF07728.9  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   4.3e-06    0.0025       1      73 [.     173     242 ..     173     270 .. 0.81

  Alignments for each domain:
  == domain 1    score: 17.4 bits;  conditional E-value: 4.3e-06
                  EEEEE------HHHHHHHGGGGBS--EEEEE--TT.--HHHH---B--.........--------G-SEEEEES CS
    PF07728.9   1 dvlLvGppGtgKselaerlaealnreveyvqltrd.tteedlkgrreiangttslvdsplvraaregeilvlDE 73 
                  +++  G+pGtgK+++a r+ + l+r      ++    t++dl+g++   + t+  ++ ++++a+  g +l++DE
  MMETSP1325-20131115|14877_1 173 HMCFTGAPGTGKTTVAVRMGQILQRMGYCRTGHVVvATRDDLVGQYV--GHTAPKTKEVIKKAM--GGVLLIDE 242
                  6899*******************888888888865157899****99..455555555555554..67777777 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   5.2e-06     0.003       7     136 ..     148     277 ..     142     287 .. 0.62

  Alignments for each domain:
  == domain 1    score: 17.8 bits;  conditional E-value: 5.2e-06
    PF13191.1   7 releaLl..aalrrvsegsp.....lllvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrn.lpysaiiqalrellrqlltelaaelggwreallaalga...lipelegiiglqalvalldaalartrrpklvlv 136
                  re++aLl  +  rr    ++      +++tG++G+GK++++ +   +il++ ++  +g+++ ++r+ l        + + + + ++++++ ++ +    l + +a     ++ ++  g+++++ ll+ +++++++  l++v
  MMETSP1325-20131115|14877_1 148 REIAALLvlDKMRRKLGFETavpslHMCFTGAPGTGKTTVAVR-MGQILQRMGYCRTGHVVVATRDdL--------VGQYVGHTAPKTKEVIKKAMGGVLLIDEAyylYNAANDRDYGQESIEILLNVMEKQQED--LIVV 277
                  56555552222222222222555668***************99.666778888888888888888832........55555555555555444444444444434555566666667777777777777777763..5555 PP

>> PF13245.1  Part of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.2     6e-06    0.0034      13      36 ..     175     200 ..     166     231 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.9 bits;  conditional E-value: 6e-06
    PF13245.1  13 lvvtGgPGtGKTttlaaiiaall....a 36 
                  +  tG PGtGKT t+a +  ++l    +
  MMETSP1325-20131115|14877_1 175 CF-TGAPGTGKT-TVAVRMGQILqrmgY 200
                  44.9********.888888777744330 PP

>> PF13207.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       8.6   4.9e+03      55      55 ..      91      91 ..      55     147 .. 0.61
   2 !   18.8   0.6   3.3e-06    0.0019       3      96 ..     175     316 ..     174     347 .. 0.66

  Alignments for each domain:
  == domain 1    score: -1.9 bits;  conditional E-value: 8.6
                 B CS
    PF13207.1 55 d 55
                  
  MMETSP1325-20131115|14877_1 91 M 91
                 1 PP

  == domain 2    score: 18.8 bits;  conditional E-value: 3.3e-06
                  --B--TT---HHHHHHHHHHS........TEEEEEGGG.B-........................-GGGS-B--.---B--SSGGGB-HHHHHHHH........H..HHHHHH.........TTS.-----------EEEEE CS
    PF13207.1   3 aitGppGsGKsTlakeLaerl........glpvlsldd.ll........................reeglkeld.dgereskdadadllaaildglaa....kkdtlswvidg.........ale.seldlrleeadeiiyl 96 
                  ++tG+pG+GK+T+a +  + l        g +v+ + d l+                        ++e+++    +++r++ ++ +++l +++++ ++    +  ++ + +d          ++  + +d+ + e+de++++
  MMETSP1325-20131115|14877_1 175 CFTGAPGTGKTTVAVRMGQILqrmgycrtGHVVVATRDdLVgqyvghtapktkevikkamggvllIDEAYYLYNaANDRDYGQESIEILLNVMEKQQEdlivVLAGYKDRMDRffsfipgmsSRIgNHIDFPNYEVDELVDI 316
                  79***************99987775555555555555545588888888888888888888888766666655547777888888999999988885444444444444444477777777744445555544444444443 PP

>> PF05707.7  Zonular occludens toxin (Zot)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.2   0.00022      0.13       5     106 ..     176     260 ..     174     345 .. 0.68

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 0.00022
    PF05707.7   5 vtGkpGsGKtleaVskdilpalkeGrkvit.nidg.LkleriekvlgekvkarlidisnpegeelekyldkwrtldkgallviDEcqqifpvragegkkvpevl 106
                  +tG+pG+GKt +aV +   + l++   + t ++    + + + ++ g+ ++         +     k++ k +    g++l+iDE+ +++++ + + +  +e++
  MMETSP1325-20131115|14877_1 176 FTGAPGTGKTTVAVRM--GQILQRMGYCRTgHVVVaTRDDLVGQYVGHTAP---------K----TKEVIKKA---MGGVLLIDEAYYLYNAANDR-DYGQESI 260
                  799***********98..555554444444333210111223333333333.........1....12222222...58899999999998887774.4455555 PP

>> PF04851.10  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0     2e-05     0.012      26      70 ..     172     222 ..     126     277 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.3 bits;  conditional E-value: 2e-05
   PF04851.10  26 krglivmaTGtGKTlvaasliarlar......kflflvprkelleqaleef 70 
                   ++++  a GtGKT va ++ + l r        ++++ r +l+ q     
  MMETSP1325-20131115|14877_1 172 LHMCFTGAPGTGKTTVAVRMGQILQRmgycrtGHVVVATRDDLVGQYVGHT 222
                  689***************84444444888999999*********9987655 PP

>> PF13671.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     7e-05      0.04       4      43 ..     176     224 ..     174     275 .. 0.73

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 7e-05
    PF13671.1   4 lvGlpGsGKstlaerllkklg.........yvrlsqdtlrkrlfgtdqq 43 
                  + G+pG+GK+t+a r+ + l+          v+ + d+l  +  g   +
  MMETSP1325-20131115|14877_1 176 FTGAPGTGKTTVAVRMGQILQrmgycrtghVVVATRDDLVGQYVGHTAP 224
                  78***********999555444445555557777777777777764443 PP

>> PF13238.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   4.3e-05     0.024       2      23 ..     175     207 ..     175     280 .. 0.69

  Alignments for each domain:
  == domain 1    score: 14.8 bits;  conditional E-value: 4.3e-05
    PF13238.1   2 litGtpGvGKtTlakeLaerl...........g 23 
                  ++tG+pG+GKtT+a +  + l           +
  MMETSP1325-20131115|14877_1 175 CFTGAPGTGKTTVAVRMGQILqrmgycrtghvV 207
                  68************8876655555566554440 PP

>> PF08433.5  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.3e-05     0.036       5      41 ..     175     216 ..     174     236 .. 0.72

  Alignments for each domain:
  == domain 1    score: 13.1 bits;  conditional E-value: 6.3e-05
    PF08433.5   5 vltGlPssGKstvakeLakalee.....egrsvvvisdeslg 41 
                   +tG P +GK+tva ++ + l+      +g  vv  +d+ +g
  MMETSP1325-20131115|14877_1 175 CFTGAPGTGKTTVAVRMGQILQRmgycrTGHVVVATRDDLVG 216
                  58*********************8888555555555555555 PP

>> PF03266.10  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   8.5e-05     0.048       2      40 ..     174     212 ..     173     242 .. 0.88

  Alignments for each domain:
  == domain 1    score: 13.2 bits;  conditional E-value: 8.5e-05
                  EEEE-------HHHHHHHHHH-...---EE--EEE---- CS
   PF03266.10   2 vfiTGepgvGKtTlvkkvlellksegvkvgGfyteevre 40 
                  +  TG pg+GKtT+  ++ + l++ g+  +G ++   r+
  MMETSP1325-20131115|14877_1 174 MCFTGAPGTGKTTVAVRMGQILQRMGYCRTGHVVVATRD 212
                  678**********************99999988777765 PP

>> PF09848.4  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.6   0.00034       0.2       7     125 ..     177     279 ..     173     285 .. 0.71

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00034
    PF09848.4   7 tGvaGtGKtvvalnllaeledseeertavflsgNhplvkvlrealakklekkkkkeavkkpssfinnlskaekkkpkedvvivDEAhrllt.kkdqkekksgenqlkellkrak..vvvalv 125
                  tG++GtGKt va+++ + l      ++  +       v + r +l +++     ++++ k +++i+++           v+++DEA  l +  +d+++ ++  + l +++++++  ++v+l 
  MMETSP1325-20131115|14877_1 177 TGAPGTGKTTVAVRMGQIL------QRMGYCRTG-HVVVATRDDLVGQY----VGHTAPKTKEVIKKAM--------GGVLLIDEAYYLYNaANDRDYGQESIEILLNVMEKQQedLIVVLA 279
                  8************998877......333344444.44445777777777....7888899999998887........889999999998884444456666677788888874446777765 PP

>> PF13521.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       5.9   3.3e+03      63     131 ..      84      91 ..      54     109 .. 0.53
   2 ?   14.5   0.1   4.1e-05     0.023       2      20 ..     174     192 ..     173     234 .. 0.79

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 5.9
    PF13521.1  63 qleqeaaaaaskllfcDrglldtlaYarllggdaekeleeaarekrydlvfllppepeieqDgeRrede 131
                  q+                                                             eR++ +
  MMETSP1325-20131115|14877_1  84 QY-------------------------------------------------------------EREHAM 91 
                  22.............................................................222222 PP

  == domain 2    score: 14.5 bits;  conditional E-value: 4.1e-05
    PF13521.1   2 ivitGgpstGKTtlleaLa 20 
                   ++tG+p+tGKTt++ ++ 
  MMETSP1325-20131115|14877_1 174 MCFTGAPGTGKTTVAVRMG 192
                  589**********996654 PP

>> PF01695.12  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   9.8e-05     0.056      50     126 ..     174     252 ..     169     283 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 9.8e-05
   PF01695.12  50 lvllGpsGvGKthlAialgveavragl....svlfvrledLveeLkrakgdgrleralkrlakvdllilDdlgllplseee 126
                  ++++G +G+GKt +A+ +g+   r g+    +v+ ++ +dLv +   + +  +  +++ + a+  +l +D++ +l    ++
  MMETSP1325-20131115|14877_1 174 MCFTGAPGTGKTTVAVRMGQILQRMGYcrtgHVVVATRDDLVGQYVGHTA-PKT-KEVIKKAMGGVLLIDEAYYLYNAAND 252
                  799****************9776655532223555666777776544333.333.33333445567788888877554444 PP

>> PF13481.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00016     0.091      35      54 ..     173     192 ..     144     214 .. 0.88
   2 ?   -2.9   0.0       5.8   3.3e+03     104     127 ..     357     381 ..     337     396 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 0.00016
    PF13481.1  35 ltllaGapgtGKStlalqla 54 
                   ++++GapgtGK+t+a+ ++
  MMETSP1325-20131115|14877_1 173 HMCFTGAPGTGKTTVAVRMG 192
                  689************99876 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 5.8
    PF13481.1 104 llvslagv.gslrltaddrrdallt 127
                   ++++a++ + +r+++++  ++++t
  MMETSP1325-20131115|14877_1 357 NAMDRARMnSAIRVFNEGLAGQQIT 381
                  4577888888888888887777764 PP

>> PF10412.4  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   9.2e-05     0.052       8      42 ..     164     197 ..     159     230 .. 0.70

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9.2e-05
    PF10412.4   8 plpkesetqhilivGttGtGKtqalrelldqirar 42 
                   +++     h++++G+ GtGKt++  ++  qi +r
  MMETSP1325-20131115|14877_1 164 GFETAVPSLHMCFTGAPGTGKTTVAVRM-GQILQR 197
                  566777889**************98886.344444 PP

>> PF01583.15  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       4.8   2.7e+03     119     151 ..      64      96 ..      51     102 .. 0.73
   2 ?   12.2   0.0   0.00017     0.095       4      31 ..     173     200 ..     170     222 .. 0.88

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 4.8
                  ---HHHHH----SS-----S-----SS-SEEEE CS
   PF01583.15 119 kglYkkaraGeikeftGidspYeaPenpelvvk 151
                  + l    r+G i+     +++Ye+ ++ el  +
  MMETSP1325-20131115|14877_1  64 RKLGDALRDGDIERKKAEKEQYEREHAMELARE 96 
                  555566688888888888889998888887655 PP

  == domain 2    score: 12.2 bits;  conditional E-value: 0.00017
                  EEEEE-ETT---HHHHHHHHHHHHCTS- CS
   PF01583.15   4 vvwltGlsgsGKstiavalekkLvekgi 31 
                   + +tG  g+GK+t+av++ + L+++g+
  MMETSP1325-20131115|14877_1 173 HMCFTGAPGTGKTTVAVRMGQILQRMGY 200
                  5789*********************996 PP

>> PF00910.17  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00018       0.1       2      51 ..     175     222 ..     174     235 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 0.00018
   PF00910.17   2 wlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqe 51 
                  +++G++g+GK+t+a + + ++l+++++ ++++v++ +++dd + +Y g++
  MMETSP1325-20131115|14877_1 175 CFTGAPGTGKTTVAVR-MGQILQRMGYCRTGHVVV-ATRDDLVGQYVGHT 222
                  799*************.777888999999888865.88899999998876 PP

>> PF05064.8  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00022      0.12      63     107 ..     246     290 ..     241     299 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 0.00022
    PF05064.8  63 LysevvkaeqeqnkldqeLdfvesqqdeLeslLdryEeeieells 107
                  Ly++  + +  q+ ++  L+++e+qq++L  +L  y +++++++s
  MMETSP1325-20131115|14877_1 246 LYNAANDRDYGQESIEILLNVMEKQQEDLIVVLAGYKDRMDRFFS 290
                  78888888899**************************99998875 PP

>> PF01656.18  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0    0.0005      0.29       9      28 ..     181     200 ..     174     201 .. 0.89

  Alignments for each domain:
  == domain 1    score: 10.4 bits;  conditional E-value: 0.0005
                  xxxxxxxxxxxxxxxxxxxx RF
   PF01656.18   9 GvGKTtlaanLaralakrgl 28 
                  G+GKTt+a+ ++++l++ g+
  MMETSP1325-20131115|14877_1 181 GTGKTTVAVRMGQILQRMGY 200
                  9***************9987 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1         2   1.1e+03     141     173 ..      64     107 ..      37     136 .. 0.59
   2 ?    9.6   0.1   0.00075      0.43       3      43 ..     173     220 ..     171     397 .. 0.84

  Alignments for each domain:
  == domain 1    score: -1.6 bits;  conditional E-value: 2
    PF12846.2 141 gdllealreeeeelaeealarde...........rreaaeelal 173
                  ++l +alr+++ e+++ ++ + e           r++++e +++
  MMETSP1325-20131115|14877_1  64 RKLGDALRDGDIERKKAEKEQYErehamelareeRQRKIEFMRD 107
                  56667777777433333333333334444433334444444444 PP

  == domain 2    score: 9.6 bits;  conditional E-value: 0.00075
    PF12846.2   3 ntlilGppGsGKSvllkkl..vlqlla..rgprvvii...Dpggeysg 43 
                  +++++G pG GK++ + ++  +lq +   r ++vv+    D  g y+g
  MMETSP1325-20131115|14877_1 173 HMCFTGAPGTGKTTVAVRMgqILQRMGycRTGHVVVAtrdDLVGQYVG 220
                  99************9999999887777555688888778888888876 PP

>> PF13604.1  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       1.6   9.1e+02     130     183 ..      69     103 ..      54     123 .. 0.54
   2 ?   10.3   0.1   0.00059      0.34      19      45 ..     172     202 ..     165     243 .. 0.79

  Alignments for each domain:
  == domain 1    score: -0.9 bits;  conditional E-value: 1.6
    PF13604.1 130 teQlqaveaGgvfrllaeeggetaeLtevvRqkdeeeraasealregepeeale 183
                  +   + +e+ ++ ++  e+ + ++eL    Rq+                   +e
  MMETSP1325-20131115|14877_1  69 ALRDGDIERKKAEKEQYEREH-AMELAREERQR------------------KIE 103
                  444444444444444444444.44444444444..................333 PP

  == domain 2    score: 10.3 bits;  conditional E-value: 0.00059
    PF13604.1  19 rvavvqGpAGtGKttvlkalrealea....a 45 
                  + ++ +G++GtGKttv   + ++l++    +
  MMETSP1325-20131115|14877_1 172 LHMCFTGAPGTGKTTVAVRMGQILQRmgycR 202
                  568899**********999999999844442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       781  (0.057124); expected 273.4 (0.02)
Passed bias filter:                      589  (0.0430807); expected 273.4 (0.02)
Passed Vit filter:                        88  (0.00643651); expected 13.7 (0.001)
Passed Fwd filter:                        24  (0.00175541); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.95u 0.30s 00:00:01.25 Elapsed: 00:00:00.59
# Mc/sec: 1665.27
//
Query:       MMETSP1325-20131115|14887_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                        87  (0.00636337); expected 273.4 (0.02)
Passed bias filter:                       85  (0.00621709); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.64
# Mc/sec: 247.12
//
Query:       MMETSP1325-20131115|14891_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.04   13.1   0.0       0.05   12.8   0.0    1.1  1  PF09053.5  CagZ
      0.077   12.8   3.6       0.11   12.3   2.5    1.3  1  PF12983.2  Protein of unknown function (DUF3867)
       0.15   12.2   1.6       0.21   11.7   0.6    1.6  2  PF03143.12 Elongation factor Tu C-terminal domain
       0.25   11.4   1.6        5.9    6.9   0.2    2.6  3  PF09713.5  Plant protein 1589 of unknown function (A_thal_3526)
       0.33   10.8   6.1       0.77    9.7   2.6    2.0  2  PF01346.13 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
       0.37   10.9   4.6       0.23   11.6   1.4    1.8  2  PF07741.8  Brf1-like TBP-binding domain


Domain annotation for each model (and alignments):
>> PF09053.5  CagZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.2e-05      0.05     104     188 ..      17     102 ..       8     111 .. 0.83

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 2.2e-05
    PF09053.5 104 fvaeisdnfnnfmcdevarisdlvasylpreylppfidgnmmgvafqilgid.dfgrk.lneivqdigtkyiilsknktyltslera 188
                   +++  d  n +m ++ +r   l   yl  + lp  +  +     ++ lg+d d+g k ln+i qd  t  ++  k + ++ + + +
  MMETSP1325-20131115|14891_1  17 EICNFVDACNGLMMQDSTRQ-ALREQYLKTNALPNQMVIEYQWEMLETLGVDkDWGVKcLNKIGQDFATDQMVHNKMQMFMNTAQDS 102
                  46677899999999999885.58999999999999999999999999****978997769**************9999998776555 PP

>> PF12983.2  Protein of unknown function (DUF3867)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.5     5e-05      0.11      37     100 ..      28     101 ..      19     143 .. 0.71

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 5e-05
    PF12983.2  37 ltmsdfskkil..eymeennisqekllniqkklleryGvdeseiekqlkklGidvsklgsesndy........e 100
                  l m+d +++ l  +y++ n + ++ +++ q ++le  Gvd++   k l k+G d+ + +  +n++        +
  MMETSP1325-20131115|14891_1  28 LMMQDSTRQALreQYLKTNALPNQMVIEYQWEMLETLGVDKDWGVKCLNKIGQDFATDQMVHNKMqmfmntaqD 101
                  56888887764337***************************************998887444444223333331 PP

>> PF03143.12  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.1   4.9e+03      70      84 ..      27      41 ..      16      45 .. 0.77
   2 ?   11.7   0.6     9e-05      0.21      26      74 ..      91     140 ..      72     143 .. 0.82

  Alignments for each domain:
  == domain 1    score: -2.3 bits;  conditional E-value: 2.1
   PF03143.12 70 piavekgkrFaiReg 84
                  ++++  +r a+Re+
  MMETSP1325-20131115|14891_1 27 GLMMQDSTRQALREQ 41
                 567788889999986 PP

  == domain 2    score: 11.7 bits;  conditional E-value: 9e-05
   PF03143.12  26 rpvlyvrTadvtgkivellkkld.sekkefvkpGdnvkvevelikpiave 74 
                  + +++++Ta+  +   ++ ++   + +ke+ ++Gd++++    ++++ v 
  MMETSP1325-20131115|14891_1  91 KMQMFMNTAQDSCMKSQMSDEEVaKAEKEMRTNGDKMQAARAQQQEVHVS 140
                  679**********888885554478888*********9988888777765 PP

>> PF09713.5  Plant protein 1589 of unknown function (A_thal_3526)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.05   1.1e+02      12      23 ..      12      23 ..      10      27 .. 0.84
   2 ?   -2.9   0.0       3.1     7e+03      22      41 ..      43      62 ..      41      63 .. 0.63
   3 ?    6.9   0.2    0.0026       5.9       7      21 ..     102     116 ..      99     121 .. 0.90

  Alignments for each domain:
  == domain 1    score: 2.8 bits;  conditional E-value: 0.05
    PF09713.5 12 ymsreEcvkaLd 23
                 +m+reE+ ++ d
  MMETSP1325-20131115|14891_1 12 KMTREEICNFVD 23
                 7******99876 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 3.1
    PF09713.5 22 LdhhanIsplvTstVWkeLe 41
                 L+++a  +  v +  W+ Le
  MMETSP1325-20131115|14891_1 43 LKTNALPNQMVIEYQWEMLE 62
                 56666666666777777776 PP

  == domain 3    score: 6.9 bits;  conditional E-value: 0.0026
    PF09713.5   7 rCillymsreEcvka 21 
                   C+  +ms eE++ka
  MMETSP1325-20131115|14891_1 102 SCMKSQMSDEEVAKA 116
                  6***********997 PP

>> PF01346.13  Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.13     3e+02      61      89 ..       9      37 ..       6      50 .. 0.75
   2 ?    9.7   2.6   0.00034      0.77      38     113 ..      83     137 ..      70     143 .. 0.52

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.13
   PF01346.13 61 kesklteeeiqkvlqalqkklqakqeeka 89
                 k+ k+t eei + + a +  +++  + +a
  MMETSP1325-20131115|14891_1  9 KSGKMTREEICNFVDACNGLMMQDSTRQA 37
                 67799999999999999988888876654 PP

  == domain 2    score: 9.7 bits;  conditional E-value: 0.00034
   PF01346.13  38 keqleeqldkdallkGlqdalagkesklteeeiqkvlqalqkklqakqeekakkkaeenkaegeaFlaenkkkeGV 113
                  + +++ + +++++++  qd+    +s++++ee+ k+                    +e +++g++  a+ ++++ V
  MMETSP1325-20131115|14891_1  83 ATDQMVHNKMQMFMNTAQDSC--MKSQMSDEEVAKAE-------------------KEMRTNGDKMQAARAQQQEV 137
                  444444445555555555555..55555555555554...................44444444444444444444 PP

>> PF07741.8  Brf1-like TBP-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       0.5   1.1e+03      64      81 ..      16      40 ..       1      55 [. 0.51
   2 ?   11.6   1.4    0.0001      0.23       9      62 ..      83     136 ..      76     143 .. 0.72

  Alignments for each domain:
  == domain 1    score: -0.3 bits;  conditional E-value: 0.5
                 X.......XXXXXXXXXXXXXXXXX CS
    PF07741.8 64 e.......aapaataaeavkkmLek 81
                 e       a +    +++++++L++
  MMETSP1325-20131115|14891_1 16 EeicnfvdACNGLMMQDSTRQALRE 40
                 2344555533444445555555544 PP

  == domain 2    score: 11.6 bits;  conditional E-value: 0.0001
                  --HHHHHHHHHHH----HH.HHHHHHHCCCCT-XXXXXXXXXXXXXXXXXXXXXX CS
    PF07741.8   9 lneeevklKeriWtelnkd.yleeqeakelkakadaatgnksrkkkkkrkakkkk 62 
                   +++ v+ K++++++  +d +++ q + e+ aka++ ++ +++ k +  +a++++
  MMETSP1325-20131115|14891_1  83 ATDQMVHNKMQMFMNTAQDsCMKSQMSDEEVAKAEK-EMRTNGDKMQAARAQQQE 136
                  678899*********999846777777777777776.566666666767766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1190  (0.0870392); expected 273.4 (0.02)
Passed bias filter:                      535  (0.0391311); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.39s 00:00:00.87 Elapsed: 00:00:00.63
# Mc/sec: 547.74
//
Query:       MMETSP1325-20131115|14893_1  [L=142]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       351  (0.0256729); expected 273.4 (0.02)
Passed bias filter:                      295  (0.0215769); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.35s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 724.01
//
Query:       MMETSP1325-20131115|14900_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       372  (0.0272089); expected 273.4 (0.02)
Passed bias filter:                      321  (0.0234786); expected 273.4 (0.02)
Passed Vit filter:                        24  (0.00175541); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.54
# Mc/sec: 284.01
//
Query:       MMETSP1325-20131115|14899_1  [L=152]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.4   0.0      0.018   14.9   0.0    1.3  1  PF00307.26 Calponin homology (CH) domain


Domain annotation for each model (and alignments):
>> PF00307.26  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.3e-06     0.018      62     105 ..       1      46 [.       1      50 [. 0.92

  Alignments for each domain:
  == domain 1    score: 14.9 bits;  conditional E-value: 1.3e-06
                  HHHHHHHHHHHHHHHCT-TTTS..-HHHHHTST-HHHHHHHHHHHH CS
   PF00307.26  62 sleNlqlalefaeeklgvscvl..tledllysgnkknvlaflaeLf 105
                  ++eN++++l++a+ ++gv+++   ++ dl++ +++ +v+  +++L 
  MMETSP1325-20131115|14899_1   1 QMENISNFLKAARTTIGVPEYDlfETVDLFEAKDMALVVRGIHSLG 46 
                  58********************9**************999888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.35s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 758.85
//
Query:       MMETSP1325-20131115|14903_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      144  (0.0105325); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.34s 00:00:00.66 Elapsed: 00:00:00.47
# Mc/sec: 351.81
//
Query:       MMETSP1325-20131115|14904_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   11.6   0.9       0.21   11.2   0.6    1.2  1  PF11213.3 Protein of unknown function (DUF3006)


Domain annotation for each model (and alignments):
>> PF11213.3  Protein of unknown function (DUF3006)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.6   1.6e-05      0.21      39      68 ..      39      71 ..      35      72 .] 0.88

  Alignments for each domain:
  == domain 1    score: 11.2 bits;  conditional E-value: 1.6e-05
    PF11213.3 39 vLei..aegaeveidpeeTeark.kriedller 68
                 +L++    +++v+ d  e+ea+k kr+e++l++
  MMETSP1325-20131115|14904_1 39 WLKVntVADTRVRKDASEKEAAKaKRAEEKLKK 71
                 6777777899*************9******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      341  (0.0249415); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.39s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 338.31
//
Query:       MMETSP1325-20131115|14909_1  [L=60]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       141  (0.010313); expected 273.4 (0.02)
Passed bias filter:                       98  (0.00716793); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 271.29
//
Query:       MMETSP1325-20131115|14910_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       160  (0.0117028); expected 273.4 (0.02)
Passed bias filter:                      156  (0.0114102); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|14915_1  [L=85]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       131  (0.00958163); expected 273.4 (0.02)
Passed bias filter:                      117  (0.00855764); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.45s 00:00:00.75 Elapsed: 00:00:00.57
# Mc/sec: 351.19
//
Query:       MMETSP1325-20131115|14922_1  [L=175]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       322  (0.0235518); expected 273.4 (0.02)
Passed bias filter:                      173  (0.0126536); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.45s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 806.47
//
Query:       MMETSP1325-20131115|14934_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       304  (0.0222352); expected 273.4 (0.02)
Passed bias filter:                      277  (0.0202604); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.56
# Mc/sec: 252.47
//
Query:       MMETSP1325-20131115|14936_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      109  (0.0079725); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.51
# Mc/sec: 319.51
//
Query:       MMETSP1325-20131115|14937_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-11   42.5   1.2    5.5e-11   42.4   0.9    1.0  1  PF01105.19 emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> PF01105.19  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.9     4e-15   5.5e-11     116     181 ..       3      68 ..       1      69 [. 0.98

  Alignments for each domain:
  == domain 1    score: 42.4 bits;  conditional E-value: 4e-15
   PF01105.19 116 leselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvvyLkrfF 181
                  le+++++l++ l++++++q+  r r++ + + n++ n+ +v  s+++++v+v++a++q++++++ F
  MMETSP1325-20131115|14937_1   3 LEKSIRRLKRGLRKLQQQQQQERHRQAVHTAVNQDSNNHMVLGSLVETVVFVATAAFQILFVRNWF 68 
                  799*************************************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1815  (0.132753); expected 273.4 (0.02)
Passed bias filter:                     1388  (0.101521); expected 273.4 (0.02)
Passed Vit filter:                       138  (0.0100936); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.52s 00:00:00.96 Elapsed: 00:00:00.57
# Mc/sec: 318.14
//
Query:       MMETSP1325-20131115|14938_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   13.5   0.1      0.052   13.4   0.1    1.0  1  PF08357.6 SEFIR domain


Domain annotation for each model (and alignments):
>> PF08357.6  SEFIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   3.8e-06     0.052      24      82 ..      10      67 ..       4      78 .. 0.86

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.8e-06
    PF08357.6 24 fLqdlcglevalDlwekkeiakegqvkwlerqiseadkviivlskgakekvkkkadkrk 82
                  L d  +l+ +lDl  + e+ak+   ++++ q++++++v++ ++++ak++ ++ a+++ 
  MMETSP1325-20131115|14938_1 10 SLNDV-ELNSMLDLVLQVEAAKKSGTEFFTFQMKSSQRVVLDVKDCAKHEKDVLAANQI 67
                 56777.999***************************************99888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       517  (0.0378145); expected 273.4 (0.02)
Passed bias filter:                      413  (0.0302077); expected 273.4 (0.02)
Passed Vit filter:                        23  (0.00168227); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.41s 00:00:00.77 Elapsed: 00:00:00.52
# Mc/sec: 368.67
//
Query:       MMETSP1325-20131115|14939_1  [L=75]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-13   48.1   0.0    7.9e-13   48.0   0.0    1.0  1  PF00962.17 Adenosine/AMP deaminase


Domain annotation for each model (and alignments):
>> PF00962.17  Adenosine/AMP deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   5.8e-17   7.9e-13     273     329 ..       2      59 ..       1      60 [. 0.97

  Alignments for each domain:
  == domain 1    score: 48.0 bits;  conditional E-value: 5.8e-17
                  EEEE--BSTTTTT--.HHHHHHHHHHT----HHHHHHHHHHHHHTSSS-HHHHHHHHH CS
   PF00962.17 273 pvslstDDPlqfgat.lseeyaiaaqalgldeedlkelarNsvksSglseeeKaella 329
                  p++ls+DDP++fg++ l  +++ a++a+ ld + lk la Ns+++S+l+e  K+++++
  MMETSP1325-20131115|14939_1   2 PMVLSSDDPGVFGYEaLTYDFYAATNAWLLDLRALKTLAFNSLRYSALPESDKQAAIG 59 
                  79*****************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       219  (0.0160181); expected 273.4 (0.02)
Passed bias filter:                      201  (0.0147016); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.39s 00:00:00.72 Elapsed: 00:00:00.55
# Mc/sec: 326.78
//
Query:       MMETSP1325-20131115|14940_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       212  (0.0155061); expected 273.4 (0.02)
Passed bias filter:                      193  (0.0141164); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.33s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 542.85
//
Query:       MMETSP1325-20131115|14942_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       189  (0.0138239); expected 273.4 (0.02)
Passed bias filter:                      184  (0.0134582); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.35s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 453.60
//
Query:       MMETSP1325-20131115|14946_1  [L=88]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.095   12.4   0.5       0.14   11.8   0.3    1.5  1  PF11250.3 Protein of unknown function (DUF3049)


Domain annotation for each model (and alignments):
>> PF11250.3  Protein of unknown function (DUF3049)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3     1e-05      0.14      22      52 ..      49      79 ..      23      82 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 1e-05
    PF11250.3 22 ahredGRLvleevrvpsrelfrAeRedGRLr 52
                 ++ +dGR v ++ +   ++++ + R++GR+ 
  MMETSP1325-20131115|14946_1 49 QQAKDGRVVESTAALACERCVLSVRHGGRME 79
                 5679***8888888888************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       336  (0.0245758); expected 273.4 (0.02)
Passed bias filter:                      269  (0.0196752); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 405.54
//
Query:       MMETSP1325-20131115|14947_1  [L=82]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   12.2   0.1      0.093   12.2   0.1    1.1  1  PF12595.3 Rhomboid serine protease


Domain annotation for each model (and alignments):
>> PF12595.3  Rhomboid serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   6.8e-06     0.093      57      92 ..      39      75 ..       1      81 [. 0.72

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 6.8e-06
    PF12595.3 57 kIvDPlA.RgrafrvpeevdglsaphtPltpGaaSla 92
                 ++v P   R rafr+p++  gl+a  +P+t  + ++a
  MMETSP1325-20131115|14947_1 39 RLVVPCGsRPRAFRTPDDPRGLTADGPPTTAATITVA 75
                 77777755**********************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       190  (0.013897); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 393.00
//
Query:       MMETSP1325-20131115|14948_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      166  (0.0121416); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.41s 00:00:00.74 Elapsed: 00:00:00.56
# Mc/sec: 338.06
//
Query:       MMETSP1325-20131115|14953_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       425  (0.0310854); expected 273.4 (0.02)
Passed bias filter:                      329  (0.0240638); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.42s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|14952_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       240  (0.0175541); expected 273.4 (0.02)
Passed bias filter:                      206  (0.0150673); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.49
# Mc/sec: 493.94
//
Query:       MMETSP1325-20131115|14961_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   14.0   0.1      0.026   13.9   0.0    1.1  1  PF13755.1 Sensor N-terminal transmembrane domain
       0.12   11.4   0.6       0.13   11.3   0.4    1.0  1  PF11050.3 Virus envelope protein E26


Domain annotation for each model (and alignments):
>> PF13755.1  Sensor N-terminal transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.7e-06     0.026      24      63 ..       2      43 ..       1      57 [. 0.80

  Alignments for each domain:
  == domain 1    score: 13.9 bits;  conditional E-value: 3.7e-06
    PF13755.1 24 laLavLvaGiLYLnqfRdgLidarveaLvt..eaeliAdvie 63
                 ++La++v G+ YL++ R++ ++ + + L +  ea + A+v  
  MMETSP1325-20131115|14961_1  2 VGLALIVCGVRYLQRLRKKALEDKQKLLEAqrEAAIAANVRG 43
                 79*******************999998865226889998855 PP

>> PF11050.3  Virus envelope protein E26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   1.9e-05      0.13      62     102 ..      13      55 ..       5      58 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.3 bits;  conditional E-value: 1.9e-05
    PF11050.3  62 klsqlqkkrvrnlqkLl..rkkneiiaeLaakLesqqkkkakh 102
                   l++l+kk +   qkLl  ++   i a++  kL + q+ ka++
  MMETSP1325-20131115|14961_1  13 YLQRLRKKALEDKQKLLeaQREAAIAANVRGKLIKDQCTKARE 55 
                  599*************933355678899999*******99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       701  (0.0512727); expected 273.4 (0.02)
Passed bias filter:                      577  (0.042203); expected 273.4 (0.02)
Passed Vit filter:                        42  (0.00307197); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 277.23
//
Query:       MMETSP1325-20131115|14962_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-07   31.2   0.0    1.5e-07   31.2   0.0    1.0  1  PF00629.18 MAM domain
  ------ inclusion threshold ------
      0.062   13.0   2.6        8.3    6.5   0.3    3.3  3  PF02012.15 BNR/Asp-box repeat


Domain annotation for each model (and alignments):
>> PF00629.18  MAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   2.2e-11   1.5e-07      65     121 ..      12      68 ..       1      70 [] 0.82

  Alignments for each domain:
  == domain 1    score: 31.2 bits;  conditional E-value: 2.2e-11
                  EEEE--SS--EEEEEEEE--SSS--EEEEEEE--------SEEE-----SS-EEEEE CS
   PF00629.18  65 spllpasssaClrFyyhmsgsevgtLnvyvreekegeetllweisgnqgssWqeaev 121
                  +++ + ++   + F+yhm+g  +g+ ++  ++++++  +++w +sgnqg++W  a+v
  MMETSP1325-20131115|14962_1  12 TKPEEGRDLTSVCFSYHMYGATMGSAELRASTDGGSSYDTIWAKSGNQGNRWSMASV 68 
                  444444556678899******************9******************99987 PP

>> PF02012.15  BNR/Asp-box repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.084   5.8e+02       5      11 ..       3       9 ..       2      10 .. 0.84
   2 ?    6.5   0.3    0.0012       8.3       3      10 ..      42      49 ..      40      51 .. 0.84
   3 ?    3.8   0.0    0.0095        65       2      12 .]      55      65 ..      54      65 .. 0.84

  Alignments for each domain:
  == domain 1    score: 1.0 bits;  conditional E-value: 0.084
                 T-----E CS
   PF02012.15  5 DgGkTWs 11
                 + G+T+s
  MMETSP1325-20131115|14962_1  3 NRGATFS 9 
                 78***97 PP

  == domain 2    score: 6.5 bits;  conditional E-value: 0.0012
                 EST----- CS
   PF02012.15  3 StDgGkTW 10
                 StDgG ++
  MMETSP1325-20131115|14962_1 42 STDGGSSY 49
                 9****997 PP

  == domain 3    score: 3.8 bits;  conditional E-value: 0.0095
                 EEST-----EE CS
   PF02012.15  2 yStDgGkTWsl 12
                 +S ++G+ Ws+
  MMETSP1325-20131115|14962_1 55 KSGNQGNRWSM 65
                 5889*****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      128  (0.0093622); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 328.91
//
Query:       MMETSP1325-20131115|14958_1  [L=256]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-17   62.0   0.1    6.2e-17   61.6   0.0    1.2  1  PF01161.15 Phosphatidylethanolamine-binding protein
  ------ inclusion threshold ------
       0.36   10.7   7.4       0.69    9.8   5.1    1.5  1  PF02297.12 Cytochrome oxidase c subunit VIb


Domain annotation for each model (and alignments):
>> PF01161.15  Phosphatidylethanolamine-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.0     9e-21   6.2e-17      32     137 ..      82     188 ..      44     195 .. 0.74

  Alignments for each domain:
  == domain 1    score: 61.6 bits;  conditional E-value: 9e-21
                  TT--EEEEEEE-S-----S-TT--EEEEEEEEE-........-............--BEE----------..-EEEEEEEEE-S-......---------------.HHT.---- CS
   PF01161.15  32 gtksyalvmtDpDapsradpkgseflHwlvvnipeteidegagarqgvnsf....gselagYlgPcPpkgtgpHrYvfllyaldv...kl.dlsapvskaelreaf.kehvLasa 137
                  ++++y++ m+DpDaps+a+p+  e+ H+lv n+         +     ++f     +e++++  P+Pp+ +g+HrY+ l+y+++    +  +l+++v  + +  af ++++L+ +
  MMETSP1325-20131115|14958_1  82 EDALYVVAMVDPDAPSAAEPSSAEVRHYLVGNVN--------STLMTEGRFdanlVDEITPFKNPSPPEDSGYHRYTQLVYKQPAgaiQFePLDNSVIIGWNVTAFaEQYGLGDP 188
                  7889******************************........2222223332133566**************************9655332444444445555555566666666 PP

>> PF02297.12  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.1    0.0001      0.69       7      35 ..     224     253 ..     216     256 .] 0.87

  Alignments for each domain:
  == domain 1    score: 9.8 bits;  conditional E-value: 0.0001
   PF02297.12   7 nerkaCweardeYfkCldk.kgedaneCka 35 
                  ne  +C+++ d Y++Cld+  +ed+ +C++
  MMETSP1325-20131115|14958_1 224 NEAAQCFKQNDYYYQCLDAcPDEDNWDCNN 253
                  8999***************66778889986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       359  (0.026258); expected 273.4 (0.02)
Passed bias filter:                      245  (0.0179198); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.37s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 1333.62
//
Query:       MMETSP1325-20131115|14973_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.0   0.0      0.037   13.6   0.0    1.2  1  PF02493.15 MORN repeat


Domain annotation for each model (and alignments):
>> PF02493.15  MORN repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.7e-06     0.037       8      21 ..       3      16 ..       1      18 [. 0.93

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.7e-06
                 TEEE-EEEB----- CS
   PF02493.15  8 GkrhGkGvytwpdG 21
                 G r+G Gv+t++dG
  MMETSP1325-20131115|14973_1  3 GARNGPGVMTYSDG 16
                 89***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      219  (0.0160181); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.51
# Mc/sec: 422.89
//
Query:       MMETSP1325-20131115|14980_1  [L=68]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-06   26.8   0.1    7.1e-06   26.4   0.0    1.2  1  PF00175.16 Oxidoreductase NAD-binding domain
  ------ inclusion threshold ------
      0.083   12.4   0.0        0.1   12.2   0.0    1.2  1  PF13580.1  SIS domain


Domain annotation for each model (and alignments):
>> PF00175.16  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0     1e-09   7.1e-06      72     108 ..       2      39 ..       1      40 [. 0.87

  Alignments for each domain:
  == domain 1    score: 26.4 bits;  conditional E-value: 1e-09
                  B--HHHHHHHCHHH..HHHCTTTEEEEEE-HHHHHHHHH CS
   PF00175.16  72 kgyvtdalleelle..eeidkeetdvyvCGppgMakavr 108
                  k+y++d++ e+++e  e + ++++++y+CG +gM+  ++
  MMETSP1325-20131115|14980_1   2 KMYIQDKVEEYADEifERL-SNGAHIYFCGLKGMMPGIQ 39 
                  89******888888*7666.77*************9887 PP

>> PF13580.1  SIS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.5e-05       0.1      18      43 ..       6      31 ..       4      47 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.5e-05
    PF13580.1 18 aeaiekaaeliaealknggvvfvfGn 43
                 ++++e+ a++i+e+l ng  ++++G 
  MMETSP1325-20131115|14980_1  6 QDKVEEYADEIFERLSNGAHIYFCGL 31
                 6899*********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       284  (0.0207724); expected 273.4 (0.02)
Passed bias filter:                      278  (0.0203335); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 332.56
//
Query:       MMETSP1325-20131115|14981_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-20   71.3   0.2    5.1e-20   71.2   0.2    1.0  1  PF00920.16 Dehydratase family


Domain annotation for each model (and alignments):
>> PF00920.16  Dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.2   3.7e-24   5.1e-20     381     438 ..       2      59 .]       1      59 [] 0.98

  Alignments for each domain:
  == domain 1    score: 71.2 bits;  conditional E-value: 3.7e-24
   PF00920.16 381 eeeaieaikdgelekgdvvviryeGPkGgpGmpemlkltaalagkglgkkvalitDGR 438
                  e+ea++ i +g++++g+vvvir+eGPkG+pGmpeml++++a++g glg++val+tDGR
  MMETSP1325-20131115|14981_1   2 EAEAFAGILEGRVRAGHVVVIRHEGPKGSPGMPEMLSPSSAIVGVGLGTEVALVTDGR 59 
                  78999****************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       144  (0.0105325); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.39s 00:00:00.68 Elapsed: 00:00:00.53
# Mc/sec: 266.76
//
Query:       MMETSP1325-20131115|14990_1  [L=190]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      258  (0.0188707); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.52
# Mc/sec: 875.59
//
Query:       MMETSP1325-20131115|14991_1  [L=134]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-05   24.3   0.0    3.9e-05   22.7   0.0    1.7  1  PF00240.18 Ubiquitin family
  ------ inclusion threshold ------
      0.013   15.0   0.0      0.018   14.5   0.0    1.2  1  PF00564.19 PB1 domain
       0.11   12.6   0.0       0.15   12.2   0.0    1.1  1  PF11543.3  Nuclear pore localisation protein NPL4


Domain annotation for each model (and alignments):
>> PF00240.18  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   8.6e-09   3.9e-05       4      67 ..      44     110 ..      41     112 .. 0.90

  Alignments for each domain:
  == domain 1    score: 22.7 bits;  conditional E-value: 8.6e-09
                  SSEEEEEEECTTSBHHHHHHHHHHHHTS-GGGEEEEE...---BETTTSBTTTTTT-TTEEEEEEES CS
   PF00240.18   4 sgktitlevepsdtvselKekieekegipvdqqrLiy...sGkvLeDdrtlseyniqdgstlhlvlr 67 
                  +++ti l vepsd  s++K+k++e   +p+++  L+    + k+L D  ++s+  i+++++l+ vl+
  MMETSP1325-20131115|14991_1  44 KNQTIFLHVEPSDNFSTVKQKVSEIFLVPASSVNLFGpdpDRKELIDLASVSDVEITNDAVLYAVLK 110
                  4669*******************************7455589*********************9998 PP

>> PF00564.19  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.9e-06     0.018      11      63 ..      46      98 ..      35     104 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.5 bits;  conditional E-value: 3.9e-06
                 EEEEEEEETSSS-HHHHHHHHHHHCTB-GSSEEEEEEETTC.SEEEE-SHHHHH CS
   PF00564.19 11 dirrilsvssnisfeeLrskveqrfklsdedvklkYpdedg.dlvtitsdeDLk 63
                 +++  l+v+++ +f+ + +kv++ f  + ++v l  pd d  +l+ + s +D++
  MMETSP1325-20131115|14991_1 46 QTI-FLHVEPSDNFSTVKQKVSEIFLVPASSVNLFGPDPDRkELIDLASVSDVE 98
                 333.599*********************************************97 PP

>> PF11543.3  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.4e-05      0.15       5      71 ..      37     101 ..      34     110 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 3.4e-05
                  ---EEE-----EE----SS--HHHHHHHHHHH------------S-------SS----TTTTT---- CS
    PF11543.3   5 iiiRvqSadGikRieisekstlktllekvaeelkfsnngfslylernkttelvssssksvkevklkh 71 
                  + iR++ ++ ++ ++++++ + +t ++kv e + ++    +l+      +el   +  sv++v++  
  MMETSP1325-20131115|14991_1  37 MYIRIKRKNQTIFLHVEPSDNFSTVKQKVSEIFLVPASSVNLFGPDPDRKEL--IDLASVSDVEITN 101
                  679****************************************887777777..4777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      237  (0.0173347); expected 273.4 (0.02)
Passed Vit filter:                        20  (0.00146284); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.32s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 655.33
//
Query:       MMETSP1325-20131115|14996_1  [L=77]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       358  (0.0261849); expected 273.4 (0.02)
Passed bias filter:                      314  (0.0229666); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.37s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 348.15
//
Query:       MMETSP1325-20131115|14992_1  [L=279]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-43  147.0   0.0    2.8e-21   75.6   0.0    2.1  2  PF00318.15 Ribosomal protein S2


Domain annotation for each model (and alignments):
>> PF00318.15  Ribosomal protein S2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   0.0     2e-25   2.8e-21       1      97 [.      28     122 ..      28     127 .. 0.95
   2 !   69.8   0.0   1.2e-23   1.6e-19     143     210 ..     128     195 ..     123     196 .. 0.96

  Alignments for each domain:
  == domain 1    score: 75.6 bits;  conditional E-value: 2e-25
                  HHH--------.SS--CHHHCCEEEE-.---EEE-HHHHHHHHHHHHHHHCCCHH.-GGEEEE--SCCHHHHHHHHHHC---EEE-SS-----GTTCC CS
   PF00318.15   1 LleagvhlGhqtrkwnpkmksyiyger.ngihiidlektlkaLkralkvvkelakkkgkilfvgtkkqaqkivekaakrtgqsyvnnrWlgGtLTNwk 97 
                  +l+a+vh+G+q  + ++ m++yi+++r +gihii++ +t+++L  a++++  + ++  +++ ++ +++ q++v k+a++tg++++ +r+++Gt+TN+ 
  MMETSP1325-20131115|14992_1  28 MLAAQVHIGTQ--NSDYMMAEYIWRRRqDGIHIINIGQTWEKLMLAARIIVAI-ENPMDVIAISARPYGQRAVLKFAQHTGCQAIAGRFTPGTFTNQV 122
                  89********8..59***********879************************.7779**************************************86 PP

  == domain 2    score: 69.8 bits;  conditional E-value: 1.2e-23
                  .-SEEEES-TTTTHHHHHHHHHTT--EEEEE-TTS-GCCSSEEEES--SSHHHHHHHHHHHHHHHHCC CS
   PF00318.15 143 lPdliivldpnkeeiairEasklnIpiialvDtntdpslidypIPgNddslksiklilnllakaileg 210
                   P+l++++dp+ +++a++Eas++n+p+ia++D++++++ +d++IP+N++   si l++++la+++l+ 
  MMETSP1325-20131115|14992_1 128 EPRLLLITDPKVDSQAVKEASYVNLPVIAFCDSDSPLQWVDVAIPANNKGKLSIGLLYWFLAREVLRM 195
                  49**************************************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       255  (0.0186513); expected 273.4 (0.02)
Passed bias filter:                      224  (0.0163839); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.33s 00:00:00.92 Elapsed: 00:00:00.64
# Mc/sec: 1044.66
//
Query:       MMETSP1325-20131115|15001_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       551  (0.0403013); expected 273.4 (0.02)
Passed bias filter:                      350  (0.0255998); expected 273.4 (0.02)
Passed Vit filter:                        36  (0.00263312); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.39s 00:00:00.73 Elapsed: 00:00:00.51
# Mc/sec: 394.69
//
Query:       MMETSP1325-20131115|15004_1  [L=109]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       110  (0.00804564); expected 273.4 (0.02)
Passed bias filter:                      102  (0.0074605); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.34s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 555.75
//
Query:       MMETSP1325-20131115|15002_1  [L=114]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-37  125.8   0.0      1e-36  125.6   0.0    1.0  1  PF02800.15 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> PF02800.15  Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.6   0.0   7.5e-41     1e-36      66     157 .]       2      93 ..       1      93 [. 0.99

  Alignments for each domain:
  == domain 1    score: 125.6 bits;  conditional E-value: 7.5e-41
                  GG---EEEEEEEES-SS-EEEEEEEEEE----HHHHHHHHHHSTT-TT----SHHHHHH-------GGG-SEEEEGGG-EEETTEEEEEEEE CS
   PF02800.15  66 elkgkltgmAlrVPtpdvsvvdlvvelekkvtveevnaalkeaaegalkgilsyteeelvssDfvgdphssifdaketivlnenlvkvvawy 157
                  +l+gkltgm++rVPt+dvsvvdl+++l+k +t+++v+ a+k+aaeg++kgil+ytee++vssDf+g+++ss+fdak++i+l +n+vkvv+wy
  MMETSP1325-20131115|15002_1   2 DLNGKLTGMSFRVPTADVSVVDLTCKLDKGATYDDVKGAIKAAAEGPMKGILGYTEEDVVSSDFIGSTYSSVFDAKAGIALTDNFVKVVSWY 93 
                  69*****************************************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       221  (0.0161644); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.37s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 546.37
//
Query:       MMETSP1325-20131115|15007_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.095   12.6   0.0       0.14   12.1   0.0    1.2  1  PF07597.6 Protein of unknown function (DUF1560)


Domain annotation for each model (and alignments):
>> PF07597.6  Protein of unknown function (DUF1560)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   9.9e-06      0.14      21      40 ..      38      57 ..      26      62 .. 0.88

  Alignments for each domain:
  == domain 1    score: 12.1 bits;  conditional E-value: 9.9e-06
    PF07597.6 21 rfeakhplskniSVRSAeiS 40
                  f+++ p    iS RSA+iS
  MMETSP1325-20131115|15007_1 38 HFNSRWPTRTGISGRSAKIS 57
                 79999**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       151  (0.0110445); expected 273.4 (0.02)
Passed bias filter:                      146  (0.0106788); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.62
# Mc/sec: 305.34
//
Query:       MMETSP1325-20131115|15009_1  [L=93]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-13   50.4   0.0    1.2e-13   50.1   0.0    1.0  1  PF00022.14 Actin
  ------ inclusion threshold ------
      0.025   13.0   0.0       0.03   12.8   0.0    1.1  1  PF06723.8  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> PF00022.14  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0   1.8e-17   1.2e-13     251     338 ..       6      85 ..       3      91 .. 0.88

  Alignments for each domain:
  == domain 1    score: 50.1 bits;  conditional E-value: 1.8e-17
   PF00022.14 251 eLPDgs.eiilgeerfrvpEilFdpsligsesaleekkllgiaelivaainacdvdlrkeLlanivvtGGtsllpglteRlekelaqla 338
                   LP+g+  ++ g+ r +++E+lF  +             +++ ++++ ++ ++++dlrk L++++vv+GG +++pg+++Rl++el++++
  MMETSP1325-20131115|15009_1   6 SLPNGRtLVVRGSTRVEAAEALFLGDGCDD---------VSVTTCVLGCLLKSPIDLRKRLVSQVVVVGGGAMIPGMCHRLHHELMARV 85 
                  59***955566899*********9866555.........499*******************************************9874 PP

>> PF06723.8  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.4e-06      0.03     253     302 ..      38      86 ..      29      91 .. 0.85

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 4.4e-06
                  HHHHHHHHHHTS-HHHHHHHHH---EEE---------HHHHHHH-----E CS
    PF06723.8 253 iveavkevLektppeLaadivdrgivltGGgallkgldkllseetglpvk 302
                  ++++v   L k p +L + +v + +v+ GGga++ g+ + l++e+  +v 
  MMETSP1325-20131115|15009_1  38 VTTCVLGCLLKSPIDLRKRLVSQVVVV-GGGAMIPGMCHRLHHELMARVA 86 
                  677888899999********9986655.*************999876664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       283  (0.0206992); expected 273.4 (0.02)
Passed bias filter:                      273  (0.0199678); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.55
# Mc/sec: 405.20
//
Query:       MMETSP1325-20131115|15008_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       238  (0.0174078); expected 273.4 (0.02)
Passed bias filter:                      232  (0.016969); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 526.16
//
Query:       MMETSP1325-20131115|15010_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       158  (0.0115565); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.35s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|15011_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       184  (0.0134582); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 448.01
//
Query:       MMETSP1325-20131115|15012_1  [L=277]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-55  187.9   0.4    1.4e-55  187.6   0.3    1.1  1  PF03997.7 VPS28 protein


Domain annotation for each model (and alignments):
>> PF03997.7  VPS28 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.6   0.3   1.1e-59   1.4e-55       1     187 [.      86     271 ..      86     272 .. 0.94

  Alignments for each domain:
  == domain 1    score: 187.6 bits;  conditional E-value: 1.1e-59
                  HHHHHHHHHHHHHHHHHHTTTSS-HHHHHHHHHHHHHHHHHH.HHTTTTT------------------HHHHHT.--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF03997.7   1 lselyailkaleklekayikDavsaseytstcekllkqykvl.lksvkkeevssiedFakkyrldcpaaieRik.egipitvedsiaassdkasvakviaeivqnFitvlDalrLnirakDqlhPllseLleslnrlselpedfearsklkkWlvrlnklsisDelsdeqvRellfDlesaYaefyklL 187
                  l+++yai+ka+e+le+ayik a+s+++yt++c+kl++q+k+  l+  +++++++  +F++++++dcp a eR+  +g+p+t  +   a++ +a    viae +q  it++Dal+L+ ra+D++hPl+s++++s+ ++ +lp+dfe+  kl +Wl++lnk+ ++De++d q+R+l fDl++ Y +f++ L
  MMETSP1325-20131115|15012_1  86 LADFYAIIKATEHLERAYIKSAISQEDYTKACKKLISQFKTSeLALLNGKTITNTAAFMNEFQMDCPLATERLLnSGVPATTLH---ATQATAPAGAVIAETTQVLITCMDALKLEQRAVDDIHPLVSDVMSSITKVPNLPKDFEGLGKLREWLETLNKMRATDEIDDDQARQLTFDLDTIYSAFHRWL 271
                  799*************************************7537889999**********************75389*******...55556666789***************************************************************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       454  (0.0332066); expected 273.4 (0.02)
Passed bias filter:                      365  (0.0266969); expected 273.4 (0.02)
Passed Vit filter:                        34  (0.00248683); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.38s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 1443.02
//
Query:       MMETSP1325-20131115|15018_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       301  (0.0220158); expected 273.4 (0.02)
Passed bias filter:                      240  (0.0175541); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|15016_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.8   0.0       0.02   14.7   0.0    1.3  1  PF11830.3 Domain of unknown function (DUF3350)


Domain annotation for each model (and alignments):
>> PF11830.3  Domain of unknown function (DUF3350)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.5e-06      0.02      17      38 ..      20      41 ..       4      57 .. 0.81

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 1.5e-06
    PF11830.3 17 svpeekrkRtseELReLWrkAI 38
                  v ee ++R+ +EL  LWr+A+
  MMETSP1325-20131115|15016_1 20 PVSEESQNRDLDELFVLWRTAV 41
                 3567889**************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       115  (0.00841135); expected 273.4 (0.02)
Passed bias filter:                      113  (0.00826507); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.35s 00:00:00.65 Elapsed: 00:00:00.52
# Mc/sec: 299.54
//
Query:       MMETSP1325-20131115|15024_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.054   12.9   0.0      0.062   12.7   0.0    1.1  1  PF07233.7 Protein of unknown function (DUF1425)


Domain annotation for each model (and alignments):
>> PF07233.7  Protein of unknown function (DUF1425)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.5e-06     0.062      33      58 ..       5      30 ..       2      37 .. 0.87

  Alignments for each domain:
  == domain 1    score: 12.7 bits;  conditional E-value: 4.5e-06
                 EE-SSS-EEEEEEEEEE-----EE-- CS
    PF07233.7 33 sskkkkdqtlqYrFyWyDaqGleved 58
                 +s+++ +  + Y +yW D  G+ v+ 
  MMETSP1325-20131115|15024_1  5 ASTTSYEESMSYSIYWVDGTGMAVQL 30
                 578888999*************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       150  (0.0109713); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.31u 0.40s 00:00:00.71 Elapsed: 00:00:00.52
# Mc/sec: 248.85
//
Query:       MMETSP1325-20131115|15032_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       154  (0.0112639); expected 273.4 (0.02)
Passed bias filter:                      136  (0.00994734); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 308.76
//
Query:       MMETSP1325-20131115|15035_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       217  (0.0158719); expected 273.4 (0.02)
Passed bias filter:                      180  (0.0131656); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.55
# Mc/sec: 248.35
//
Query:       MMETSP1325-20131115|15038_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-08   32.8   0.3    2.2e-07   30.2   0.0    1.9  2  PF13445.1  RING-type zinc-finger, LisH dimerisation motif
    3.9e-08   32.9   0.0    5.6e-08   32.4   0.0    1.3  1  PF04564.10 U-box domain
    1.5e-05   24.3   0.0    5.8e-05   22.4   0.0    1.8  2  PF11789.3  Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
      0.021   13.9   0.0      0.026   13.6   0.0    1.3  1  PF04641.7  Replication termination factor 2
      0.072   12.8   0.0      0.098   12.3   0.0    1.2  1  PF13923.1  Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.2     0.087   2.4e+02      20      28 ..      10      21 ..       5      28 .. 0.72
   2 !   30.2   0.0   7.9e-11   2.2e-07      11      48 ..      27      61 ..      22      68 .. 0.85

  Alignments for each domain:
  == domain 1    score: 1.3 bits;  conditional E-value: 0.087
                 SS.......EEE CS
    PF13445.1 20 steqnp...Pvv 28
                 s+e+np   P++
  MMETSP1325-20131115|15038_1 10 SNEDNPfkqPMM 21
                 688999888997 PP

  == domain 2    score: 30.2 bits;  conditional E-value: 7.9e-11
                 -B-TTT-S.-SS....EEEES---EEEHHHHHHHHHHHH CS
    PF13445.1 11 faCpiske.qsteqnpPvvLpCGhvisrealeklakggr 48
                  +Cpis+  + +    P+v   Gh +++ a+e+++k++ 
  MMETSP1325-20131115|15038_1 27 HICPISQSlMVQ----PMVAEDGHLYEKAAIERWLKDNG 61
                 58********77....********************432 PP

>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   2.1e-11   5.6e-08       4      47 ..      26      68 ..      24      72 .] 0.89

  Alignments for each domain:
  == domain 1    score: 32.4 bits;  conditional E-value: 2.1e-11
                 GGB-TTT-SB-SSEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-S CS
   PF04564.10  4 efldpitlelmkdPvilPsgitvDrstiekhllsrdktdPftre 47
                   ++pi+  lm +P+++ +g+ +++++ie++l+  + ++P t +
  MMETSP1325-20131115|15038_1 26 NHICPISQSLMVQPMVAEDGHLYEKAAIERWLKD-NGNSPKTGM 68
                 679******************************9.888887755 PP

>> PF11789.3  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.23   6.2e+02      19      27 ..      14      22 ..      12      28 .. 0.76
   2 !   22.4   0.0   2.1e-08   5.8e-05      12      47 ..      27      61 ..      24      70 .. 0.87

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.23
                 SB-SSEEEE CS
    PF11789.3 19 kpfkePvts 27
                 +pfk+P+  
  MMETSP1325-20131115|15038_1 14 NPFKQPMMR 22
                 699999975 PP

  == domain 2    score: 22.4 bits;  conditional E-value: 2.1e-08
                 -B-TTT-SB-SSEEEES----EEEHHHHHHHHTTT- CS
    PF11789.3 12 lkCpltlkpfkePvtskkCnHvFEkeaIlkmlkrkk 47
                   Cp++++ + +P+      H +Ek aI++ lk ++
  MMETSP1325-20131115|15038_1 27 HICPISQSLMVQPMVAED-GHLYEKAAIERWLKDNG 61
                 56************9987.9************7654 PP

>> PF04641.7  Replication termination factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   9.4e-06     0.026      30      70 ..      22      61 ..       1      69 [. 0.75

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 9.4e-06
    PF04641.7 30 kearwklCaLskepLekPivadrlGkLYnkdavleaLldks 70
                 +  +  +C++s+  + +P va   G+LY k a+ ++L d  
  MMETSP1325-20131115|15038_1 22 RLLENHICPISQSLMVQPMVAE-DGHLYEKAAIERWLKDNG 61
                 5556689*************96.5********999998874 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.6e-05     0.098       2      36 ..      26      59 ..      25      66 .. 0.89

  Alignments for each domain:
  == domain 1    score: 12.3 bits;  conditional E-value: 3.6e-05
    PF13923.1  2 rfsCpiCleelenpviltpCgHlyCkkCieqwlek 36
                 + +Cpi ++ + +p++    gHly k  ie+wl+ 
  MMETSP1325-20131115|15038_1 26 NHICPISQSLMVQPMV-AEDGHLYEKAAIERWLKD 59
                 678***********87.9***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       298  (0.0217964); expected 273.4 (0.02)
Passed bias filter:                      289  (0.0211381); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.34u 0.41s 00:00:00.75 Elapsed: 00:00:00.56
# Mc/sec: 302.70
//
Query:       MMETSP1325-20131115|15033_1  [L=261]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-56  190.0   0.8      2e-56  189.8   0.6    1.0  1  PF03398.9 Regulator of Vps4 activity in the MVB pathway
  ------ inclusion threshold ------
      0.028   14.0   0.1       0.88    9.2   0.1    2.5  2  PF07498.7 Rho termination factor, N-terminal domain


Domain annotation for each model (and alignments):
>> PF03398.9  Regulator of Vps4 activity in the MVB pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.8   0.6     3e-60     2e-56       2     165 .]      35     200 ..      34     200 .. 0.98

  Alignments for each domain:
  == domain 1    score: 189.8 bits;  conditional E-value: 3e-60
    PF03398.9   2 tqlklaisRlkllqnkkealvkqarrevaqlLelg..keesAriRveqvireditlelleilelycelllarvsllekskecpeelkeAvasiiyAaprltevkELqeirkllvekyGkefaeaavenreegVnekvvekLsvktpseelvekylkeIAkeynvel 165
                    lk+a+ R ++++nkk++l+k  +re+a lL++   kee+AriRve+vired t+e++eilel cell++rv+l++++kecp++++eA +++i+Aa+r++ ++EL ei k+l  kyGkef e+a  n++ +Vne+v++kLs+++p+  lv +yl++IA+eynv++
  MMETSP1325-20131115|15033_1  35 PYLKQAVHRFAIVKNKKTNLIKADKREIAGLLANVpcKEEKARIRVEKVIREDFTIEAFEILELLCELLHERVRLMTSEKECPPDMEEAFCTLIWAANRVDGIPELAEIAKQLKLKYGKEFFERALANEGGCVNERVLHKLSIQPPTAYLVREYLQAIATEYNVDW 200
                  679******************************954499*****************************************************************************************************************************98 PP

>> PF07498.7  Rho termination factor, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00013      0.88       7      20 ..     137     150 ..     136     154 .. 0.89
   2 ?    1.7   0.0     0.028   1.9e+02      10      19 ..     189     198 ..     187     201 .. 0.92

  Alignments for each domain:
  == domain 1    score: 9.2 bits;  conditional E-value: 0.00013
    PF07498.7   7 leeLreiAkelgie 20 
                  ++eL eiAk+l+++
  MMETSP1325-20131115|15033_1 137 IPELAEIAKQLKLK 150
                  79**********97 PP

  == domain 2    score: 1.7 bits;  conditional E-value: 0.028
    PF07498.7  10 LreiAkelgi 19 
                  L++iA+e+++
  MMETSP1325-20131115|15033_1 189 LQAIATEYNV 198
                  99******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       478  (0.034962); expected 273.4 (0.02)
Passed bias filter:                      435  (0.0318169); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.44s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 1202.79
//
Query:       MMETSP1325-20131115|15040_1  [L=121]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       139  (0.0101668); expected 273.4 (0.02)
Passed bias filter:                      132  (0.00965477); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 616.93
//
Query:       MMETSP1325-20131115|15044_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      157  (0.0114833); expected 273.4 (0.02)
Passed Vit filter:                         4  (0.000292569); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.28u 0.40s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 321.21
//
Query:       MMETSP1325-20131115|15030_1  [L=422]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1288  (0.0942071); expected 273.4 (0.02)
Passed bias filter:                      472  (0.0345231); expected 273.4 (0.02)
Passed Vit filter:                        96  (0.00702165); expected 13.7 (0.001)
Passed Fwd filter:                         9  (0.00065828); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.83u 0.59s 00:00:01.42 Elapsed: 00:00:00.56
# Mc/sec: 1774.15
//
Query:       MMETSP1325-20131115|15046_1  [L=65]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       156  (0.0114102); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 268.56
//
Query:       MMETSP1325-20131115|15045_1  [L=432]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-20   69.8   0.0    0.00032   19.6   0.0    4.4  4  PF00036.27 EF hand
    2.7e-18   65.7   0.0    1.9e-08   34.2   0.0    2.3  2  PF13499.1  EF-hand domain pair
    1.7e-16   58.5   0.2      0.005   16.0   0.0    4.3  4  PF13202.1  EF hand
    4.8e-16   57.0   0.3     0.0072   16.0   0.0    4.6  4  PF13405.1  EF-hand domain
    2.3e-08   33.4  10.6    6.4e-08   32.1   7.4    1.8  1  PF13639.1  Ring finger domain
    1.3e-06   27.8   0.2        1.2    8.6   0.0    4.2  4  PF13833.1  EF-hand domain pair
    6.8e-05   22.8   5.9    0.00019   21.4   4.1    1.7  1  PF12678.2  RING-H2 zinc finger
    0.00045   19.8   0.1     0.0009   18.9   0.1    1.5  1  PF00627.26 UBA/TS-N domain
    0.00057   19.5   8.4    0.00057   19.5   5.9    2.2  2  PF13923.1  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.012   15.1   8.6      0.012   15.1   5.9    2.3  2  PF13920.1  Zinc finger, C3HC4 type (RING finger)
       0.25   10.9  10.5       0.71    9.4   7.3    1.8  1  PF00097.20 Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PF00036.27  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   2.6e-07   0.00032       2      28 ..     260     286 ..     259     287 .. 0.91
   2 !   11.2   0.0   0.00013      0.16       4      23 ..     301     320 ..     298     321 .. 0.89
   3 !   15.9   0.0     4e-06    0.0049       5      26 ..     353     374 ..     351     377 .. 0.89
   4 !   17.9   0.0   9.5e-07    0.0012       3      23 ..     395     415 ..     393     416 .. 0.90

  Alignments for each domain:
  == domain 1    score: 19.6 bits;  conditional E-value: 2.6e-07
                  HHHHHHHHCTTTSSEBEHHHHHHHHHH CS
   PF00036.27   2 lkeaFkefDkDgdGkIsfeEfkealkk 28 
                  ++ +F++ DkDgdG ++  E +e++k+
  MMETSP1325-20131115|15045_1 260 AQAWFRVCDKDGDGSLNPREVLEIIKA 286
                  6889*******************9986 PP

  == domain 2    score: 11.2 bits;  conditional E-value: 0.00013
                  HHHHHHCTTTSSEBEHHHHH CS
   PF00036.27   4 eaFkefDkDgdGkIsfeEfk 23 
                  ++++  D + dG+I  +Ef+
  MMETSP1325-20131115|15045_1 301 KLWQRWDPNMDGQIQRDEFL 320
                  789999*************7 PP

  == domain 3    score: 15.9 bits;  conditional E-value: 4e-06
                  HHHHHCTTTSSEBEHHHHHHHH CS
   PF00036.27   5 aFkefDkDgdGkIsfeEfkeal 26 
                  +F +fD Dg+G +s++E  + l
  MMETSP1325-20131115|15045_1 353 WFHHFDEDGSGELSVQEVTRGL 374
                  79***************98877 PP

  == domain 4    score: 17.9 bits;  conditional E-value: 9.5e-07
                  HHHHHHHCTTTSSEBEHHHHH CS
   PF00036.27   3 keaFkefDkDgdGkIsfeEfk 23 
                   +++ +fD D++G Is +Ef+
  MMETSP1325-20131115|15045_1 395 ANIWCIFDADRSGEISRDEFL 415
                  57999***************7 PP

>> PF13499.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   1.5e-11   1.9e-08       6      63 ..     264     320 ..     241     321 .. 0.83
   2 !   29.1   0.0   5.9e-10   7.3e-07       6      63 ..     354     415 ..     339     415 .. 0.93

  Alignments for each domain:
  == domain 1    score: 34.2 bits;  conditional E-value: 1.5e-11
    PF13499.1   6 FkllDkdgdgyldkeeLlrllkhlgselsdeevrevldyifkelDkngdGvlsfeEfl 63 
                  F+ +Dkdgdg+l++ e l+++k+ + +   e +++ l +++++ D n dG+++++Efl
  MMETSP1325-20131115|15045_1 264 FRVCDKDGDGSLNPREVLEIIKA-QFPVDYEKLEKDLPKLWQRWDPNMDGQIQRDEFL 320
                  9********************87.6788866666666667*****************8 PP

  == domain 2    score: 29.1 bits;  conditional E-value: 5.9e-10
    PF13499.1   6 FkllDkdgdgyldkeeLlrllkhlgsels....deevrevldyifkelDkngdGvlsfeEfl 63 
                  F  +D dg+g l+++e +r l ++ + +        +re++ +i+  +D +++G +s++Efl
  MMETSP1325-20131115|15045_1 354 FHHFDEDGSGELSVQEVTRGLIKSYHLKQdissVNRLREIVANIWCIFDADRSGEISRDEFL 415
                  889********************99888899998899999999999***************6 PP

>> PF13202.1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0     4e-06     0.005       2      20 ..     261     279 ..     260     282 .. 0.91
   2 !    8.7   0.0   0.00077      0.96       9      21 ..     307     319 ..     305     321 .. 0.92
   3 !   12.7   0.0   4.3e-05     0.053       4      21 ..     353     370 ..     350     375 .. 0.87
   4 !   15.4   0.1     6e-06    0.0074       8      21 ..     401     414 ..     400     416 .. 0.94

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 4e-06
                  HHHHHHH--S----B-HHH CS
    PF13202.1   2 kdtFrafDlNgDGkIsreE 20 
                  +++Fr+ D++gDG +++ E
  MMETSP1325-20131115|15045_1 261 QAWFRVCDKDGDGSLNPRE 279
                  68************99877 PP

  == domain 2    score: 8.7 bits;  conditional E-value: 0.00077
                  --S----B-HHHH CS
    PF13202.1   9 DlNgDGkIsreEL 21 
                  D N DG+I r+E+
  MMETSP1325-20131115|15045_1 307 DPNMDGQIQRDEF 319
                  77**********9 PP

  == domain 3    score: 12.7 bits;  conditional E-value: 4.3e-05
                  HHHHH--S----B-HHHH CS
    PF13202.1   4 tFrafDlNgDGkIsreEL 21 
                  +F  fD +g+G +s +E 
  MMETSP1325-20131115|15045_1 353 WFHHFDEDGSGELSVQEV 370
                  8***************95 PP

  == domain 4    score: 15.4 bits;  conditional E-value: 6e-06
                  H--S----B-HHHH CS
    PF13202.1   8 fDlNgDGkIsreEL 21 
                  fD++++G Isr+E+
  MMETSP1325-20131115|15045_1 401 FDADRSGEISRDEF 414
                  9************9 PP

>> PF13405.1  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   6.8e-06    0.0084       3      27 ..     261     285 ..     259     291 .. 0.91
   2 !    7.1   0.0    0.0042       5.3       6      24 ..     303     321 ..     301     337 .. 0.87
   3 !   16.0   0.0   5.8e-06    0.0072       6      26 ..     354     374 ..     351     382 .. 0.89
   4 !   12.6   0.0     7e-05     0.088       8      23 ..     400     415 ..     395     416 .. 0.89

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 6.8e-06
                  H---GCC-------B---HHHHHHH CS
    PF13405.1   3 reaFklfDkdgdGkidaeELrdaLr 27 
                  ++ F+  DkdgdG ++  E++ +++
  MMETSP1325-20131115|15045_1 261 QAWFRVCDKDGDGSLNPREVLEIIK 285
                  689*****************99987 PP

  == domain 2    score: 7.1 bits;  conditional E-value: 0.0042
                  -GCC-------B---HHHH CS
    PF13405.1   6 FklfDkdgdGkidaeELrd 24 
                  ++  D + dG+i ++E+++
  MMETSP1325-20131115|15045_1 303 WQRWDPNMDGQIQRDEFLA 321
                  6778*************75 PP

  == domain 3    score: 16.0 bits;  conditional E-value: 5.8e-06
                  -GCC-------B---HHHHHH CS
    PF13405.1   6 FklfDkdgdGkidaeELrdaL 26 
                  F++fD dg+G+++ +E+ + L
  MMETSP1325-20131115|15045_1 354 FHHFDEDGSGELSVQEVTRGL 374
                  ****************98876 PP

  == domain 4    score: 12.6 bits;  conditional E-value: 7e-05
                  CC-------B---HHH CS
    PF13405.1   8 lfDkdgdGkidaeELr 23 
                  +fD d++G+i+++E++
  MMETSP1325-20131115|15045_1 400 IFDADRSGEISRDEFL 415
                  7*************96 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   7.4   5.2e-11   6.4e-08       2      45 ..     195     245 ..     194     246 .. 0.89

  Alignments for each domain:
  == domain 1    score: 32.1 bits;  conditional E-value: 5.2e-11
    PF13639.1   2 eCaiCldelsegeevvrl......p.CgHvfHeeCldewlrssnsCPlCrk 45 
                  eCaiC+++l++ e+v +       + C+H+fH eC ++  +  + CPlCr+
  MMETSP1325-20131115|15045_1 195 ECAICFEPLCNPEPVAVFcdgqskRvCHHFFHLECARQTAQLGTDCPLCRA 245
                  8*********9888886677777756************************7 PP

>> PF13833.1  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.013        16      25      43 ..     258     276 ..     248     281 .. 0.87
   2 ?    3.6   0.0     0.036        45      35      49 ..     307     321 ..     304     322 .. 0.91
   3 ?    4.9   0.0     0.014        17      31      48 ..     354     371 ..     354     376 .. 0.84
   4 !    8.6   0.0   0.00099       1.2      34      48 ..     401     415 ..     397     417 .. 0.93

  Alignments for each domain:
  == domain 1    score: 5.1 bits;  conditional E-value: 0.013
    PF13833.1  25 eevdilfrefDtdgdGkis 43 
                  +++++ fr+ D dgdG ++
  MMETSP1325-20131115|15045_1 258 DDAQAWFRVCDKDGDGSLN 276
                  458999**********997 PP

  == domain 2    score: 3.6 bits;  conditional E-value: 0.036
    PF13833.1  35 DtdgdGkisfeEFcv 49 
                  D + dG i  +EF++
  MMETSP1325-20131115|15045_1 307 DPNMDGQIQRDEFLA 321
                  899**********86 PP

  == domain 3    score: 4.9 bits;  conditional E-value: 0.014
    PF13833.1  31 frefDtdgdGkisfeEFc 48 
                  f++fD dg+G +s  E  
  MMETSP1325-20131115|15045_1 354 FHHFDEDGSGELSVQEVT 371
                  899*********988865 PP

  == domain 4    score: 8.6 bits;  conditional E-value: 0.00099
    PF13833.1  34 fDtdgdGkisfeEFc 48 
                  fD+d++G is +EF+
  MMETSP1325-20131115|15045_1 401 FDADRSGEISRDEFL 415
                  9*************6 PP

>> PF12678.2  RING-H2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   4.1   1.5e-07   0.00019      20      75 .]     192     244 ..     180     244 .. 0.72

  Alignments for each domain:
  == domain 1    score: 21.4 bits;  conditional E-value: 1.5e-07
    PF12678.2  20 d..nCaiCrneleelcpeckapgksdecpv.awgeCgHaFHlhCiskWlktrktCPlcr 75 
                  d  +CaiC ++l      c+ +  +  c    +  C+H FHl+C ++  +  + CPlcr
  MMETSP1325-20131115|15045_1 192 DhaECAICFEPL------CNPEPVAVFCDGqSKRVCHHFFHLECARQTAQLGTDCPLCR 244
                  3225********......33333122255544455***********************8 PP

>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   7.2e-07    0.0009       7      34 ..     117     144 ..     114     146 .. 0.92

  Alignments for each domain:
  == domain 1    score: 18.9 bits;  conditional E-value: 7.2e-07
                  HHHHH----HHHHHHHHHHTTTSHHHHH CS
   PF00627.26   7 qqLreMGfsreeakkALratnnnvErAv 34 
                    +++MG +++ a+ AL ++nnn ErA+
  MMETSP1325-20131115|15045_1 117 GAIVAMGIEESWARLALSRCNNNTERAI 144
                  579************************8 PP

>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   1.4       4.9   6.1e+03      39      39 ..      65      65 ..      46      78 .. 0.53
   2 !   19.5   5.9   4.6e-07   0.00057       2      45 ..     193     244 ..     192     245 .. 0.82

  Alignments for each domain:
  == domain 1    score: -3.0 bits;  conditional E-value: 4.9
    PF13923.1 39 k 39
                  
  MMETSP1325-20131115|15045_1 65 H 65
                 1 PP

  == domain 2    score: 19.5 bits;  conditional E-value: 4.6e-07
    PF13923.1   2 rfsCpiCleelen..pviltp.......CgHlyCkkCieqwlekskkkCPiCr 45 
                  + +C iC+e l n  pv++++       C H ++ +C+ q ++     CP+Cr
  MMETSP1325-20131115|15045_1 193 HAECAICFEPLCNpePVAVFCdgqskrvCHHFFHLECARQTAQL-GTDCPLCR 244
                  579**********9966655544445557799************.*******9 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.6      0.85   1.1e+03      26      44 ..      53      71 ..      46      74 .. 0.64
   2 ?   15.1   5.9   9.4e-06     0.012       3      47 ..     194     247 ..     192     250 .. 0.84

  Alignments for each domain:
  == domain 1    score: -0.7 bits;  conditional E-value: 0.85
    PF13920.1 26 CeeCaerllkrkkkCpiCr 44
                 C +C++    + ++C+ C 
  MMETSP1325-20131115|15045_1 53 CLSCGTVQPYTLHRCMECG 71
                 6666655555556666664 PP

  == domain 2    score: 15.1 bits;  conditional E-value: 9.4e-06
    PF13920.1   3 ktCvvCleread....vlllp......CgHlclCeeCaerllkrkkkCpiCrspi 47 
                   +C +C+e  ++    ++++       C H  +  eCa++ ++    Cp+Cr++ 
  MMETSP1325-20131115|15045_1 194 AECAICFEPLCNpepvAVFCDgqskrvCHHF-FHLECARQTAQLGTDCPLCRAQF 247
                  58******86666665777767888889999.********************986 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   7.3   0.00057      0.71       1      41 []     196     243 ..     196     243 .. 0.96

  Alignments for each domain:
  == domain 1    score: 9.4 bits;  conditional E-value: 0.00057
                  -TTTSSS-SSEE..........BSCTS-EE-CHHHHHHHCST-----TTT CS
   PF00097.20   1 CpiCleeakepn.........elleCkHsfCskCirkilksrkkvkCPlC 41 
                  C+iC+e +++p              C+H f+ +C r+  +    + CPlC
  MMETSP1325-20131115|15045_1 196 CAICFEPLCNPEpvavfcdgqSKRVCHHFFHLECARQTAQ--LGTDCPLC 243
                  ********************98899***************..8888**** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       434  (0.0317437); expected 273.4 (0.02)
Passed bias filter:                      300  (0.0219427); expected 273.4 (0.02)
Passed Vit filter:                        49  (0.00358397); expected 13.7 (0.001)
Passed Fwd filter:                        12  (0.000877706); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.73u 0.34s 00:00:01.07 Elapsed: 00:00:00.85
# Mc/sec: 1217.91
//
Query:       MMETSP1325-20131115|15063_1  [L=106]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       152  (0.0111176); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         9  (0.00065828); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.33s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 577.30
//
Query:       MMETSP1325-20131115|15067_1  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-71  237.6   3.3    7.8e-71  237.3   2.3    1.1  1  PF01251.13 Ribosomal protein S7e
  ------ inclusion threshold ------
      0.031   13.2   0.0      0.052   12.5   0.0    1.4  1  PF02882.14 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain


Domain annotation for each model (and alignments):
>> PF01251.13  Ribosomal protein S7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.3   2.3   1.1e-74   7.8e-71       1     187 [.       6     202 ..       6     204 .] 0.95

  Alignments for each domain:
  == domain 1    score: 237.3 bits;  conditional E-value: 1.1e-74
   PF01251.13   1 kkilkkkeekpseleksvaqalldlEsnskdlkaelrelkissakeievsk...kkkavvifvPvpllkayrk........iqqrLvrELEKkfsgkhvvlvaqRrilpkpkrksrtkkkqkrprsrTltaVhdaiLedlvyPaeivGkRirvkldGskllkvfLDkkekkeveeklesfsavykkltgkdvvfefpe 187
                  kki+k++++kp+e+e++vaq l++lE++++d+ka+lr+l+i++ake++v++   +kka++++vP+++lk+++k         q rLvrELEKkfsgkhvv+vaqR+il k   +  tk+k  rprsrTltaV daiLedlv+P+eivGkR+r+kldG+k lkv+LD k+  ++++kl++fs+vyk lt+k+v+fefp 
  MMETSP1325-20131115|15067_1   6 KKIVKPDGQKPTEFENNVAQELFNLEMSASDIKADLRDLHITAAKEVDVGDpsiGKKAIILMVPYKILKNFHKkfaqnntpTQVRLVRELEKKFSGKHVVIVAQRTILGKSYAR-STKTKGPRPRSRTLTAVQDAILEDLVFPTEIVGKRTRCKLDGTKELKVLLDAKDIVNTDTKLDTFSDVYKILTNKQVSFEFPV 202
                  69***********************************************987789****************9866666666699**************************9988.456899***************************************************************************97 PP

>> PF02882.14  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.6e-06     0.052      18      53 ..      84     118 ..      70     138 .. 0.82

  Alignments for each domain:
  == domain 1    score: 12.5 bits;  conditional E-value: 7.6e-06
                  HHHHHHHHHHHH--..--S-EEEEE---TT---HHH CS
   PF02882.14  18 ctpkgivellketgielegkkvvvvGrsnivgkpla 53 
                   tp+  v+l++e + + +gk+vv+v + +i+gk+ a
  MMETSP1325-20131115|15067_1  84 NTPT-QVRLVRELEKKFSGKHVVIVAQRTILGKSYA 118
                  4554.468************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       523  (0.0382534); expected 273.4 (0.02)
Passed bias filter:                      431  (0.0315243); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.37s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 940.11
//
Query:       MMETSP1325-20131115|15074_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.29   10.0   7.2       0.29   10.0   5.0    1.0  1  PF01516.11 Orbivirus helicase VP6


Domain annotation for each model (and alignments):
>> PF01516.11  Orbivirus helicase VP6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   5.0   2.1e-05      0.29      49     102 ..       7      59 ..       1      71 [. 0.74

  Alignments for each domain:
  == domain 1    score: 10.0 bits;  conditional E-value: 2.1e-05
   PF01516.11  49 sdGeGeqkkkGkkeesdketkdadvdrrlatevGsgssakgsgeradk.dadrGd 102
                  ++GeG+ ++  ++ es+  t ++d  +++a+ +G gs++kg    a   d  +Gd
  MMETSP1325-20131115|15074_1   7 REGEGKSSDG-GQSESSSSTVAEDYATVMASLMG-GSTSKGRSLSASMdDGSGGD 59 
                  4788877655.555666788999***********.*****988777640445555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       281  (0.020553); expected 273.4 (0.02)
Passed bias filter:                      214  (0.0156524); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 361.90
//
Query:       MMETSP1325-20131115|15072_1  [L=125]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.063   13.2   0.5      0.098   12.6   0.4    1.3  1  PF11521.3 C-terminal general transcription factor TFIIE alpha


Domain annotation for each model (and alignments):
>> PF11521.3  C-terminal general transcription factor TFIIE alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.4   7.2e-06     0.098      53      79 ..      65      91 ..      61      95 .. 0.91

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 7.2e-06
    PF11521.3 53 sevsqrpeLveqmteqEkeaYievgQd 79
                  ev+q ++ +e m+eqE+ +Yi+  Q 
  MMETSP1325-20131115|15072_1 65 AEVDQMEKEMEGMSEQERLNYISWKQT 91
                 699*******************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       645  (0.0471767); expected 273.4 (0.02)
Passed bias filter:                      570  (0.041691); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 651.18
//
Query:       MMETSP1325-20131115|15079_1  [L=57]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       187  (0.0136776); expected 273.4 (0.02)
Passed bias filter:                      152  (0.0111176); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.39s 00:00:00.70 Elapsed: 00:00:00.56
# Mc/sec: 243.91
//
Query:       MMETSP1325-20131115|15080_1  [L=70]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                      112  (0.00819193); expected 273.4 (0.02)
Passed Vit filter:                         1  (7.31422e-05); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.54
# Mc/sec: 310.64
//
Query:       MMETSP1325-20131115|15081_1  [L=94]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       692  (0.0506144); expected 273.4 (0.02)
Passed bias filter:                      523  (0.0382534); expected 273.4 (0.02)
Passed Vit filter:                        54  (0.00394968); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.39s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 450.52
//
Query:       MMETSP1325-20131115|15073_1  [L=217]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       513  (0.0375219); expected 273.4 (0.02)
Passed bias filter:                      393  (0.0287449); expected 273.4 (0.02)
Passed Vit filter:                        32  (0.00234055); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.38s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 962.98
//
Query:       MMETSP1325-20131115|15082_1  [L=138]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       172  (0.0125805); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.38s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 674.89
//
Query:       MMETSP1325-20131115|15091_1  [L=173]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       247  (0.0180661); expected 273.4 (0.02)
Passed bias filter:                      241  (0.0176273); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.38s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 812.88
//
Query:       MMETSP1325-20131115|15097_1  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       177  (0.0129462); expected 273.4 (0.02)
Passed bias filter:                      155  (0.011337); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 383.42
//
Query:       MMETSP1325-20131115|15097_2  [L=80]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-15   55.5   0.1    3.7e-15   55.5   0.1    1.0  1  PF12780.2 P-loop containing dynein motor region D4


Domain annotation for each model (and alignments):
>> PF12780.2  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.1   2.7e-19   3.7e-15     161     213 ..       3      55 ..       1      80 [] 0.83

  Alignments for each domain:
  == domain 1    score: 55.5 bits;  conditional E-value: 2.7e-19
    PF12780.2 161 qlkvvlcfspvgsklrvrsrkfpavvnctaidwfhewpqealvsvslrfleet 213
                  +l++vl++sp+g+ +r r+r fp++vnc +idwf  wp++al sv+   lee 
  MMETSP1325-20131115|15097_2   3 NLHIVLAMSPIGAGFRNRCRMFPSLVNCCTIDWFNAWPEDALFSVAHVKLEEK 55 
                  6899*****************************************99888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       369  (0.0269895); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        33  (0.00241369); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 407.89
//
Query:       MMETSP1325-20131115|15103_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.012   15.5   0.0      0.015   15.2   0.0    1.2  1  PF00212.13 Atrial natriuretic peptide


Domain annotation for each model (and alignments):
>> PF00212.13  Atrial natriuretic peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   1.1e-06     0.015      13      24 ..      16      27 ..       6      29 .. 0.82

  Alignments for each domain:
  == domain 1    score: 15.2 bits;  conditional E-value: 1.1e-06
                 XXX-------SS CS
   PF00212.13 13 rssGCFGrklDR 24
                   s CFG+++DR
  MMETSP1325-20131115|15103_1 16 EASLCFGARIDR 27
                 4588*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       157  (0.0114833); expected 273.4 (0.02)
Passed bias filter:                      139  (0.0101668); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.48
# Mc/sec: 269.59
//
Query:       MMETSP1325-20131115|15113_1  [L=176]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      212  (0.0155061); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 897.36
//
Query:       MMETSP1325-20131115|15115_1  [L=104]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       441  (0.0322557); expected 273.4 (0.02)
Passed bias filter:                      336  (0.0245758); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.36s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 519.21
//
Query:       MMETSP1325-20131115|15111_1  [L=295]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-29  101.8   0.0    6.6e-29  101.0   0.0    1.4  1  PF00504.16 Chlorophyll A-B binding protein


Domain annotation for each model (and alignments):
>> PF00504.16  Chlorophyll A-B binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.0   0.0   4.8e-33   6.6e-29       7     154 ..      53     190 ..      47     192 .. 0.79

  Alignments for each domain:
  == domain 1    score: 101.0 bits;  conditional E-value: 4.8e-33
                  XXXXXXXX...XXXXXX.----TTTTT--------TTT------------------S--TT--.STT.-------S-TT.THHHH---HHHHHHHHTT------------------------.-----------STTT----TTTTT------ CS
   PF00504.16   7 gslpgdlg...fDplglskdptlkrlreaEliHGRvAMlavlGalvpelltklsaaskfaelpawae.agglslptllalqillligflelareqelkapesegsekraypGglgfdplgla.kdeeekaelklkEiknGRlAMiaflgfvvq 154
                  g ++ ++g   +Dplgl+   +++ lr++E+++GRvAMla++G+++p++++ + +++  ++ p + + a+   + +++++qil+lig++e+    e+k++ s++        +++fdp++   +d++++a ++++E+knGRlAMiaf++++ +
  MMETSP1325-20131115|15111_1  53 G-ATVEVGgkpWDPLGLAVYRDFDELRACEIKNGRVAMLATTGWVWPQMFGLFDSKDVTTTDP-IKAiAE---VDATAWAQILVLIGSFEAL---EYKHKMSGS-------TKPFFDPFNQVpSDPAKAALKAESELKNGRLAMIAFASYLSA 190
                  5.444556689*******7779**************************998887655544444.444344...8889999***********7...444433322.......3468****9778************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      189  (0.0138239); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.37s 00:00:00.95 Elapsed: 00:00:00.50
# Mc/sec: 1413.85
//
Query:       MMETSP1325-20131115|15122_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   14.1   0.1       0.12   12.4   0.0    1.7  2  PF12445.3 Flagellin protein
      0.086   12.4   0.0       0.14   11.7   0.0    1.4  1  PF13717.1 zinc-ribbon domain
        0.1   12.1   0.0       0.16   11.4   0.0    1.3  1  PF13719.1 zinc-ribbon domain
       0.13   11.7   0.0       0.21   11.0   0.0    1.3  1  PF13878.1 zinc-finger of acetyl-transferase ESCO


Domain annotation for each model (and alignments):
>> PF12445.3  Flagellin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.4e-05      0.12     102     125 ..      17      40 ..      15      44 .. 0.92
   2 ?   -0.7   0.0      0.37   1.3e+03      70      84 ..      66      79 ..      53      83 .. 0.72

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 3.4e-05
    PF12445.3 102 qaDGsVtngsGkavYvsadGklTT 125
                  +aDG+++ +   avY  adGk+T 
  MMETSP1325-20131115|15122_1  17 NADGEIKCSLCGAVYSLADGKMTA 40 
                  89********************94 PP

  == domain 2    score: -0.7 bits;  conditional E-value: 0.37
    PF12445.3 70 gkvtftagkaavYvd 84
                  +v+++a k++vY+d
  MMETSP1325-20131115|15122_1 66 FEVQTDA-KDKVYMD 79
                 4677777.4888887 PP

>> PF13717.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.1e-05      0.14       3      21 ..      22      40 ..      21      44 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.1e-05
    PF13717.1  3 IeCpnCkakyeiddekipp 21
                 I C  C+a+y ++d k+ +
  MMETSP1325-20131115|15122_1 22 IKCSLCGAVYSLADGKMTA 40
                 99************99876 PP

>> PF13719.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.8e-05      0.16       3      21 ..      22      40 ..      21      44 .. 0.88

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 4.8e-05
    PF13719.1  3 IeCpnCkakyeiddekipp 21
                 I C  C+a+y ++d k+ +
  MMETSP1325-20131115|15122_1 22 IKCSLCGAVYSLADGKMTA 40
                 89************99876 PP

>> PF13878.1  zinc-finger of acetyl-transferase ESCO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.1e-05      0.21       7      25 ..      16      33 ..      15      37 .. 0.84

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 6.1e-05
    PF13878.1  7 GqkdfgrttCstCgMlYtp 25
                 G++d g ++Cs Cg +Y+ 
  MMETSP1325-20131115|15122_1 16 GNAD-GEIKCSLCGAVYSL 33
                 5667.899*********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       316  (0.0231129); expected 273.4 (0.02)
Passed bias filter:                      299  (0.0218695); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.36s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 429.35
//
Query:       MMETSP1325-20131115|15120_1  [L=353]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-32  111.0   0.5    4.9e-32  110.2   0.3    1.4  1  PF13012.1  Maintenance of mitochondrial structure and function
    7.5e-25   86.7   0.0    1.3e-24   85.9   0.0    1.4  1  PF01398.16 JAB1/Mov34/MPN/PAD-1 ubiquitin protease


Domain annotation for each model (and alignments):
>> PF13012.1  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.2   0.3   7.2e-36   4.9e-32       2     115 .]     183     296 ..     182     296 .. 0.99

  Alignments for each domain:
  == domain 1    score: 110.2 bits;  conditional E-value: 7.2e-36
    PF13012.1   2 EaeeigvehllrdlndqyysnlsrkleseqkmLknLhkklweiglyledveagklplnhsilrklqsllnllpnlnnkeleeefnvetndqllvvylgkldrkqialhelienk 115
                  Eaee+gvehllrd+nd ++s+l  ++ ++  +L +L ++l +++ yle+v agklp+n+ i++++q ++nllpnln +el ++++v+tnd+ lv+y+++l+r++ialh+l++nk
  MMETSP1325-20131115|15120_1 183 EAEEVGVEHLLRDVNDPSTSSLQNQIKAKAAALGGLREQLLDMKAYLENVLAGKLPVNNLIIYNMQTIFNLLPNLNIDELITALKVKTNDMHLVIYVSSLIRCIIALHDLVRNK 296
                  9**************************************************************************************************************997 PP

>> PF01398.16  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.9   0.0     2e-28   1.3e-24       4     113 ..      25     134 ..      22     135 .. 0.97

  Alignments for each domain:
  == domain 1    score: 85.9 bits;  conditional E-value: 2e-28
   PF01398.16   4 qavhleslvllkildhalrteke...evmGlliGelnddttveitnvfalprsetekdvdaveldqe..ekksellkklrgrervVGWYhshphitvwlshvdvrtqamyqmmdq 113
                   +v++++lvll+ +dh++r+ k+   +v+G+l+G  ++  tv++tn+fa+p++e+  + +  ++d++   ++  ++kk+++re++VG+Y+++p+i    +++d+r+ ++++++++
  MMETSP1325-20131115|15120_1  25 VTVVVHPLVLLSTVDHYNRVAKDtkkRVVGVLLGNKSKG-TVDVTNSFAVPFEEDLRNPNIFFIDHDflGTMFSMYKKVNARENIVGFYSTGPKI----KENDIRIDELIRRFCP 134
                  58********************9999*************.*******************************************************....**********999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       617  (0.0451287); expected 273.4 (0.02)
Passed bias filter:                      371  (0.0271358); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.37s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 1691.83
//
Query:       MMETSP1325-20131115|15127_1  [L=160]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-16   58.9   0.0    5.1e-16   58.6   0.0    1.1  1  PF10075.4  COP9 signalosome, subunit CSN8
    3.9e-09   36.1   0.0    4.7e-09   35.9   0.0    1.1  1  PF03399.11 SAC3/GANP/Nin1/mts3/eIF-3 p25 family


Domain annotation for each model (and alignments):
>> PF10075.4  COP9 signalosome, subunit CSN8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.0   7.4e-20   5.1e-16       8     142 ..       4     139 ..       2     140 .. 0.92

  Alignments for each domain:
  == domain 1    score: 58.6 bits;  conditional E-value: 7.4e-20
    PF10075.4   8 tliLlkaLtqndiadfrlllkrlpaaikesdeeiqkllsLeqlLeendyakfwqtlksndlsedltafvagleelvRkeiaelvgkaYesIsadvlaelLglsdeelekfvver...gWeldsdgvlvpfnpe.eakpe 142
                  +l L kaL+  +++d  ll  ++p+ ++ + e + +l++  + Le++++ +fw++++     ++l + v g+ e +R  ++ +++ +Y++++ + +a+lL l++ +le++v ++   +  +d+++v+++ n e +++p+
  MMETSP1325-20131115|15127_1   4 ALALTKALMALPSTDMALLMYLVPETVQSK-EPVATLVRCAEHLETAKFVEFWEVANL--GGNELLDNVPGFDEAIRSYMIGVLSITYQKLESETFADLLALDEGDLEEYVSANqsdKLAIDGKNVVFTPNSEnQQRPK 139
                  67899*******************999986.***********************8775..489***********************************************988753456669***********888887 PP

>> PF03399.11  SAC3/GANP/Nin1/mts3/eIF-3 p25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   6.9e-13   4.7e-09     102     203 ..       3     101 ..       1     102 [. 0.95

  Alignments for each domain:
  == domain 1    score: 35.9 bits;  conditional E-value: 6.9e-13
   PF03399.11 102 vayiLLyalvadpspdfnlelellpaelrtdpliqhalqleaaleegnyarffklleskdvpylmaclleifenaiRkealkaiskayrssiplkflaelLg 203
                  +a+ L +al+a ps+d++l + l+p+++++++ + ++++  + le++++++f+  + +   ++l   + + f +aiR + + ++s +y++ ++ + +a lL+
  MMETSP1325-20131115|15127_1   3 IALALTKALMALPSTDMALLMYLVPETVQSKEPVATLVRCAEHLETAKFVEFWEVA-NLGGNELLDNVPG-FDEAIRSYMIGVLSITYQK-LESETFADLLA 101
                  688999*******************99***************************77.778999*******.******************9.*******9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       381  (0.0278672); expected 273.4 (0.02)
Passed bias filter:                      358  (0.0261849); expected 273.4 (0.02)
Passed Vit filter:                        31  (0.00226741); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.56
# Mc/sec: 672.66
//
Query:       MMETSP1325-20131115|15128_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      191  (0.0139702); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.54
# Mc/sec: 350.58
//
Query:       MMETSP1325-20131115|15131_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      348  (0.0254535); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.41s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 290.33
//
Query:       MMETSP1325-20131115|15133_1  [L=79]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       182  (0.0133119); expected 273.4 (0.02)
Passed bias filter:                      175  (0.0127999); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.49
# Mc/sec: 386.35
//
Query:       MMETSP1325-20131115|15148_1  [L=174]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00085   19.4   0.1     0.0014   18.7   0.1    1.3  1  PF00264.15 Common central domain of tyrosinase


Domain annotation for each model (and alignments):
>> PF00264.15  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.1     1e-07    0.0014     186     218 ..      26      56 ..      10      57 .. 0.83

  Alignments for each domain:
  == domain 1    score: 18.7 bits;  conditional E-value: 1e-07
                  HHH--.-----TTGGGGSTHHHHHHHHHHHHHH CS
   PF00264.15 186 HvwvGgGhmgdvavaafDPiFflHHaniDrlwa 218
                  Hv    G+m  +++a++DPiF+  H+  Dr+ +
  MMETSP1325-20131115|15148_1  26 HVGHA-GEM-FTSAAPYDPIFWPIHGLADRFLQ 56 
                  55455.776.88999***************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       159  (0.0116296); expected 273.4 (0.02)
Passed bias filter:                      142  (0.0103862); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.50
# Mc/sec: 833.93
//
Query:       MMETSP1325-20131115|15150_1  [L=102]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.28   10.7   0.3       0.28   10.7   0.2    1.9  3  PF10031.4 Small integral membrane protein (DUF2273)


Domain annotation for each model (and alignments):
>> PF10031.4  Small integral membrane protein (DUF2273)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.27   3.7e+03      19      25 ..      19      25 ..      10      28 .. 0.64
   2 ?   10.7   0.2     2e-05      0.28      20      38 ..      34      52 ..      32      55 .. 0.90
   3 ?   -3.2   0.1      0.45   6.2e+03      36      37 ..      89      90 ..      83      95 .. 0.49

  Alignments for each domain:
  == domain 1    score: -2.6 bits;  conditional E-value: 0.27
    PF10031.4 19 ilAvlil 25
                 +lAv ++
  MMETSP1325-20131115|15150_1 19 LLAVSFV 25
                 4566665 PP

  == domain 2    score: 10.7 bits;  conditional E-value: 2e-05
    PF10031.4 20 lAvliltiGFwktlLvlvl 38
                  Avl +t G+w+t++++v+
  MMETSP1325-20131115|15150_1 34 AAVLHMTPGLWGTVFAAVF 52
                 599**************99 PP

  == domain 3    score: -3.2 bits;  conditional E-value: 0.45
    PF10031.4 36 lv 37
                 ++
  MMETSP1325-20131115|15150_1 89 VL 90
                 22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       435  (0.0318169); expected 273.4 (0.02)
Passed bias filter:                      342  (0.0250146); expected 273.4 (0.02)
Passed Vit filter:                        28  (0.00204798); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.38s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 509.23
//
Query:       MMETSP1325-20131115|15155_1  [L=90]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      186  (0.0136044); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.39s 00:00:00.76 Elapsed: 00:00:00.52
# Mc/sec: 414.75
//
Query:       MMETSP1325-20131115|15157_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0029   17.4   5.1     0.0051   16.6   3.6    1.3  1  PF05680.7 ATP synthase E chain
  ------ inclusion threshold ------
       0.13   12.3   2.9       0.16   12.0   2.0    1.1  1  PF07807.6 RED-like protein C-terminal region


Domain annotation for each model (and alignments):
>> PF05680.7  ATP synthase E chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   3.6   7.5e-07    0.0051      17      72 ..      58     112 ..      56     119 .. 0.84

  Alignments for each domain:
  == domain 1    score: 16.6 bits;  conditional E-value: 7.5e-07
    PF05680.7  17 aLvlGvvYGakhqrslkakakkeekereyeaqekliekakaayakkkqakseaksl 72 
                  aL +Gv +G+k+    + + k ++ +re e+++k+ e  ka + k+k+ ++   +l
  MMETSP1325-20131115|15157_1  58 ALGAGVYAGVKNAAGAT-SRKLAAVKREKEHNRKMAEIDKAQEHKRKEREERVARL 112
                  9*************999.88999999*********999999998888888764444 PP

>> PF07807.6  RED-like protein C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   2.0   2.4e-05      0.16      64     117 ..      65     118 ..      57     119 .. 0.84

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.4e-05
    PF07807.6  64 yGvkmqdGrktrkkkekdekaeldrelkkinkilekkklekdGggggkdvkkak 117
                   Gvk++ G  +rk  + + ++e +r++ +i+k  e+k+ e++   ++ ++kk k
  MMETSP1325-20131115|15157_1  65 AGVKNAAGATSRKLAAVKREKEHNRKMAEIDKAQEHKRKEREERVARLKAKKDK 118
                  59***********88888888*************99998888887777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1413  (0.10335); expected 273.4 (0.02)
Passed bias filter:                      879  (0.064292); expected 273.4 (0.02)
Passed Vit filter:                        86  (0.00629023); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.37s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 614.07
//
Query:       MMETSP1325-20131115|15158_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       293  (0.0214307); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.35s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 554.16
//
Query:       MMETSP1325-20131115|15149_1  [L=538]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-18   65.4  17.9    2.7e-10   39.9   5.3    2.6  3  PF01925.14 Sulfite exporter TauE/SafE
  ------ inclusion threshold ------
        0.2   10.5   1.3        1.7    7.4   0.0    2.6  2  PF03918.9  Cytochrome C biogenesis protein
        1.6    7.9  13.5      0.051   12.8   4.2    1.9  2  PF07423.6  Protein of unknown function (DUF1510)


Domain annotation for each model (and alignments):
>> PF01925.14  Sulfite exporter TauE/SafE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.1   1.1e-11   4.8e-08       4     109 ..      38     153 ..      34     195 .. 0.78
   2 ?   -1.9   0.2      0.35   1.6e+03     195     210 ..     281     296 ..     243     317 .. 0.49
   3 !   39.9   5.3     6e-14   2.7e-10       5     110 ..     389     500 ..     376     519 .. 0.81

  Alignments for each domain:
  == domain 1    score: 32.6 bits;  conditional E-value: 1.1e-11
   PF01925.14   4 agllaGflagltGfGggliavPlLll.ll.pppvavatsllavlvtslvg..ala...h..rrkg.nvdwrlllplllgallGallGallllllpskllkllfgvlllllallmll 109
                  +++  G la+ +G+Ggg ++vP+ ++ ll + ++av++s +++l +++++  +l+   h   ++g  +d+ +  ++ +g llG+++G+ll  +l ++ + ++++vll + ++  l 
  MMETSP1325-20131115|15149_1  38 IIMTLGSLAAGAGIGGGGLFVPMYSFiLLkSGKAAVPLSKCTILGAAIGNfqVLStekHpvTKEGpVIDYETSSFMQAGELLGVVFGVLLNMVLTETEIMIFLVVLLTYNSYNTLK 153
                  5677899999************999866667777*******999988886555552222434456568999999999****************99998899999999988888765 PP

  == domain 2    score: -1.9 bits;  conditional E-value: 0.35
   PF01925.14 195 llllvllllpgallGa 210
                  ++++++ + p  +lG+
  MMETSP1325-20131115|15149_1 281 AVYWIWYFTPVLFLGG 296
                  2223333444444432 PP

  == domain 3    score: 39.9 bits;  conditional E-value: 6e-14
   PF01925.14   5 gllaGflagltGfGggliavPlLll.llpppvavatsllavlvtslvgalahrrkgnvdwrlllplllgallGallGallllllp.....skllkllfgvlllllallmllr 110
                  +llaG+ agl+G+Ggg+++ Pl++   ++p va  + ++++l t l+g+++++   ++ w+l+l++++++   + +G   l+++      ++++ ll+g ++ l++++m++ 
  MMETSP1325-20131115|15149_1 389 ALLAGLAAGLLGIGGGMVLGPLFIEiGMQPTVAKSSCAFMILWTGLSGVIQYWMADKLGWQLALYFIMVGYCSGQIGQRGLKQVIkatgrESIVILLLGGIIGLACISMVVT 500
                  7899999999999999999998887447888899999999999999999999998778899999998888888889988777444233333378999999999999999763 PP

>> PF03918.9  Cytochrome C biogenesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0   0.00038       1.7     100     132 ..     282     314 ..     277     339 .. 0.60
   2 ?    0.7   0.1     0.047   2.1e+02      99     121 ..     377     399 ..     374     404 .. 0.84

  Alignments for each domain:
  == domain 1    score: 7.4 bits;  conditional E-value: 0.00038
    PF03918.9 100 stllLWlgPllllllgllvlllvlrrrrrkkae 132
                    ++ +++P+l+l  ++l+++++l+++ ++k++
  MMETSP1325-20131115|15149_1 282 VYWIWYFTPVLFLGGAMLAVARILKKSYETKRA 314
                  455555666666666666666666666655554 PP

  == domain 2    score: 0.7 bits;  conditional E-value: 0.047
    PF03918.9  99 pstllLWlgPllllllgllvlll 121
                  ++++ LW +P ++ll+gl++ ll
  MMETSP1325-20131115|15149_1 377 WTNANLWKFPKTALLAGLAAGLL 399
                  57889************998765 PP

>> PF07423.6  Protein of unknown function (DUF1510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   4.2   1.1e-05     0.051      22     121 ..     136     242 ..     125     248 .. 0.40
   2 ?   -1.1   0.5      0.19   8.7e+02      61      89 ..     332     358 ..     299     370 .. 0.50

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.1e-05
    PF07423.6  22 iVvvlivivaaqllvgnskskkasadeeeeeksedeekteeeevkeeekeaakdedked.......dsesekkdeeseeeeeeekekkeeeseedeketeekeesnv 121
                  i + l+v+++++   + +k  ++ + e+++++ +++e+++e +++ e+ke  k+++  +        +++e +   +e e++++k +++e+ ++  ++++  eesnv
  MMETSP1325-20131115|15149_1 136 IMIFLVVLLTYNSYNTLKKGVTKWNAETKAKEAAEKEAAKESDKDAETKEGDKSASGGSveltvstRGDDETDLTMNELESDDDKADASEKGQKPVEINAATEESNV 242
                  22233333333333322233222333333344444444444444444443333333333434444344444444444444444444444455555555555555555 PP

  == domain 2    score: -1.1 bits;  conditional E-value: 0.19
    PF07423.6  61 eeeevkeeekeaakdedkeddsesekkde 89 
                  ++e+vk  e  + +de++e     +kk+e
  MMETSP1325-20131115|15149_1 332 NDEKVKAAEGGEGDDEEREA--ILAKKKE 358
                  23333333333333333332..2222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1087  (0.0795056); expected 273.4 (0.02)
Passed bias filter:                      506  (0.0370099); expected 273.4 (0.02)
Passed Vit filter:                        52  (0.00380339); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.00u 0.37s 00:00:01.37 Elapsed: 00:00:00.77
# Mc/sec: 1674.34
//
Query:       MMETSP1325-20131115|15160_1  [L=66]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       114  (0.00833821); expected 273.4 (0.02)
Passed bias filter:                      108  (0.00789936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.37s 00:00:00.68 Elapsed: 00:00:00.47
# Mc/sec: 336.51
//
Query:       MMETSP1325-20131115|15161_1  [L=167]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   13.0   0.0      0.063   12.6   0.0    1.2  1  PF04281.8 Mitochondrial import receptor subunit Tom22
        7.3    6.5   7.3        1.9    8.3   2.7    1.8  2  PF10297.4 Minimal binding motif of Hap4 for binding to Hap2/3/5


Domain annotation for each model (and alignments):
>> PF04281.8  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   9.2e-06     0.063      44      69 ..      54      80 ..      26     102 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 9.2e-06
    PF04281.8 44 dsdve.edEtlldRivALkDivppttR 69
                   d+  +++  ++R+ AL D++pp+ +
  MMETSP1325-20131115|15161_1 54 AGDYMrDEDMTYERLLALDDLLPPKPK 80
                 334442555679************976 PP

>> PF10297.4  Minimal binding motif of Hap4 for binding to Hap2/3/5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.7   0.00027       1.9       7      16 ..      75      84 ..      74      85 .. 0.92
   2 ?   -2.1   0.0      0.52   3.6e+03       7      11 ..     136     140 ..     136     140 .. 0.82

  Alignments for each domain:
  == domain 1    score: 8.3 bits;  conditional E-value: 0.00027
    PF10297.4  7 LPPRPKPGRK 16
                 LPP+PKP R+
  MMETSP1325-20131115|15161_1 75 LPPKPKPARR 84
                 9******997 PP

  == domain 2    score: -2.1 bits;  conditional E-value: 0.52
    PF10297.4   7 LPPRP 11 
                  +P+R+
  MMETSP1325-20131115|15161_1 136 VPQRV 140
                  6**96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       337  (0.0246489); expected 273.4 (0.02)
Passed bias filter:                      255  (0.0186513); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.39s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 833.73
//
Query:       MMETSP1325-20131115|15174_1  [L=63]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (63 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      178  (0.0130193); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.34s 00:00:00.68 Elapsed: 00:00:00.48
# Mc/sec: 314.52
//
Query:       MMETSP1325-20131115|15178_1  [L=105]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       311  (0.0227472); expected 273.4 (0.02)
Passed bias filter:                      271  (0.0198215); expected 273.4 (0.02)
Passed Vit filter:                        17  (0.00124342); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.55
# Mc/sec: 457.49
//
Query:       MMETSP1325-20131115|15163_1  [L=99]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-30  104.9   0.0    1.6e-30  104.7   0.0    1.0  1  PF01249.13 Ribosomal protein S21e


Domain annotation for each model (and alignments):
>> PF01249.13  Ribosomal protein S21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.7   0.0   1.1e-34   1.6e-30       1      74 [.      16      90 ..      16      97 .. 0.96

  Alignments for each domain:
  == domain 1    score: 104.7 bits;  conditional E-value: 1.1e-34
   PF01249.13  1 MqndagelvdlYiPrkCsatnrlieakDhasvQiniaevden.gritgekktyalsgairqkgesddalnrlakk 74
                 Mqn+++e+vdlYiPrkCs+tnrlieakD+asvQ  ++++d+  g +tg++kt+a++g++r++ esd a+ +l++k
  MMETSP1325-20131115|15163_1 16 MQNENKEIVDLYIPRKCSWTNRLIEAKDKASVQFAVGDIDPAsGLFTGDSKTIAIAGYVRHHSESDMAVWHLHTK 90
                 9*****************************************999*************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      327  (0.0239175); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.40s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 484.16
//
Query:       MMETSP1325-20131115|15166_1  [L=340]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.3    7.6   7.1        3.2    7.1   0.3    2.9  3  PF04156.9 IncA protein


Domain annotation for each model (and alignments):
>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1     0.027   3.7e+02       7      27 ..      25      45 ..      23      53 .. 0.86
   2 ?    2.2   0.1    0.0075     1e+02      41      77 ..     192     231 ..     183     247 .. 0.58
   3 ?    7.1   0.3   0.00024       3.2      33      68 ..     274     308 ..     270     318 .. 0.79

  Alignments for each domain:
  == domain 1    score: 0.4 bits;  conditional E-value: 0.027
    PF04156.9  7 lsvaliilgllliasGiallv 27
                 +++++ +l+llli ++ ++++
  MMETSP1325-20131115|15166_1 25 VNLVSYVLSLLLIYLSLTGIF 45
                 68899********99998854 PP

  == domain 2    score: 2.2 bits;  conditional E-value: 0.0075
    PF04156.9  41 lgivliAlgvvLlalgllllllkapvqseedekiee....s 77 
                  l  ++i l ++L a+g ll+++ a   s +d++i +    +
  MMETSP1325-20131115|15166_1 192 LAWCAITL-AALTAIGALLAFCGAMYESASDSPILVgvftW 231
                  44555543.66666666666666666666666666555553 PP

  == domain 3    score: 7.1 bits;  conditional E-value: 0.00024
    PF04156.9  33 lgvlisallgivliAlgvvLlalgllllllkapvqs 68 
                  l+++++al++++li + ++L+al+++ ++ ++++  
  MMETSP1325-20131115|15166_1 274 LSGACAALSVTMLI-VLCALVALAVYRASTQPAEAG 308
                  77777777777777.57*********9998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       719  (0.0525892); expected 273.4 (0.02)
Passed bias filter:                      209  (0.0152867); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.39s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 1597.57
//
Query:       MMETSP1325-20131115|15165_1  [L=635]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-06   27.5   0.0    4.2e-06   26.3   0.0    1.6  1  PF13768.1  von Willebrand factor type A domain
    1.5e-05   25.0   1.4    4.5e-05   23.5   0.0    2.3  3  PF13519.1  von Willebrand factor type A domain
    0.00041   19.9   0.0    0.00076   19.1   0.0    1.3  1  PF00092.23 von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> PF13768.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   9.3e-10   4.2e-06      93     156 .]      15      82 ..      11      82 .. 0.85

  Alignments for each domain:
  == domain 1    score: 26.3 bits;  conditional E-value: 9.3e-10
    PF13768.1  93 akpgearhvlllsdgss.tsga...ervlqliraaarkirifalglgetlsadmlqeLAeaggGsyef 156
                  +++++ +++lll+dg +  s++    ++lq+ +++   ++i ++g+g +l+ ++l  LA++g+G+y f
  MMETSP1325-20131115|15165_1  15 RDQQRQKTLLLLTDGQPnISPPqghIQALQDYKDCGLSFQINTFGFGYSLDSELLLGLAQEGNGTYAF 82 
                  5678899**********877774556666666677799****************************87 PP

>> PF13519.1  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   9.9e-09   4.5e-05      96     158 ..      16      83 ..      12      93 .. 0.81
   2 ?   -1.3   0.1       0.4   1.8e+03     118     154 ..     252     287 ..     198     296 .. 0.64
   3 ?   -1.7   0.0      0.52   2.4e+03      40      74 ..     323     377 ..     279     393 .. 0.44

  Alignments for each domain:
  == domain 1    score: 23.5 bits;  conditional E-value: 9.9e-09
    PF13519.1  96 adgrraaivlvtDGedn....ssdieaasalkrag..ikiyvvgvgsdegaeallkelaeatggryfda 158
                  +++r+++++l+tDG++n    ++ i+a+++ k+ g   +i+++g+g + ++ +ll  la++++g+y  +
  MMETSP1325-20131115|15165_1  16 DQQRQKTLLLLTDGQPNisppQGHIQALQDYKDCGlsFQINTFGFGYSLDS-ELLLGLAQEGNGTYAFI 83 
                  56799************6554444567777775555599*********998.9************9866 PP

  == domain 2    score: -1.3 bits;  conditional E-value: 0.4
    PF13519.1 118 aasalkragikiyvvgvgsdegaeallkelaeatggr 154
                  ++++l+ a++   +v +g+d +a++ l++l  +  gr
  MMETSP1325-20131115|15165_1 252 SIQQLA-AKVAPGAVDLGGDVAAAQRLEALHADVSGR 287
                  444444.444445667777777766676666555555 PP

  == domain 3    score: -1.7 bits;  conditional E-value: 0.52
    PF13519.1  40 rvglvafsgsaelva....................pltsdraalkaalnsldprl 74 
                  + gl  ++g+ +l++                    p+t+  aa  aa +++ p  
  MMETSP1325-20131115|15165_1 323 DPGLQLYGGDLFLALkaqgdtiflslpppkasqppPPTTRGAAAGAATTAAAPAA 377
                  4455555555555543333333334444444443345555555555555555443 PP

>> PF00092.23  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.7e-07   0.00076      99     165 ..      15      83 ..      11      89 .. 0.81

  Alignments for each domain:
  == domain 1    score: 19.1 bits;  conditional E-value: 1.7e-07
                  HHTTSEEEEEEE-----C---STHHHHHHHHHH......GEEEEEEEE--SCCCHHHHHHCS-SSTTCCCB-S CS
   PF00092.23  99 srenapkvvillTDGksndggspeaaaaklrek......klgitvfgvGvsdvdeeelrsiaskpdseghvfr 165
                  + ++ +k ++llTDG++n +  p++ ++++ +         +i++fg+G    d+e l  +a+++ +++ +f+
  MMETSP1325-20131115|15165_1  15 RDQQRQKTLLLLTDGQPNIS--PPQGHIQALQDykdcglSFQINTFGFGY-SLDSELLLGLAQEG-NGTYAFI 83 
                  45689***************..6666666665567***************.***********776.4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       439  (0.0321094); expected 273.4 (0.02)
Passed bias filter:                      252  (0.0184318); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.99u 0.39s 00:00:01.38 Elapsed: 00:00:00.55
# Mc/sec: 2766.70
//
Query:       MMETSP1325-20131115|15185_1  [L=71]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0072   15.9   0.0      0.008   15.8   0.0    1.1  1  PF01491.11 Frataxin-like domain


Domain annotation for each model (and alignments):
>> PF01491.11  Frataxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   5.9e-07     0.008      58     102 ..      19      65 ..       4      68 .. 0.81

  Alignments for each domain:
  == domain 1    score: 15.8 bits;  conditional E-value: 5.9e-07
   PF01491.11  58 pnkqiWlsspksgpkrfdld..egeWidkrdgsellelLeeelseql 102
                   ++++    p+sg++ + ++   ++W++k+d ++l+ ++++ l +q+
  MMETSP1325-20131115|15185_1  19 ELQEVHCFLPVSGSYTYTYHanVQRWLCKEDSHDLEGIMTRDLLKQC 65 
                  55666666799********964489***************9998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       274  (0.020041); expected 273.4 (0.02)
Passed bias filter:                      253  (0.018505); expected 273.4 (0.02)
Passed Vit filter:                        16  (0.00117028); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.35s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 340.28
//
Query:       MMETSP1325-20131115|15186_1  [L=103]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-07   29.9  12.2    7.1e-07   29.0   8.5    1.5  1  PF07884.9 Vitamin K epoxide reductase family
  ------ inclusion threshold ------
      0.028   13.9   2.2      0.033   13.7   1.5    1.1  1  PF11168.3 Protein of unknown function (DUF2955)
      0.085   12.3   0.2       0.11   12.0   0.1    1.2  1  PF06703.6 Microsomal signal peptidase 25 kDa subunit (SPC25)


Domain annotation for each model (and alignments):
>> PF07884.9  Vitamin K epoxide reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   8.5   1.6e-10   7.1e-07      58     136 ..       5      73 ..       1      75 [. 0.83

  Alignments for each domain:
  == domain 1    score: 29.0 bits;  conditional E-value: 1.6e-10
    PF07884.9  58 plsllGilaylvvlllavlllarvtlsrwawlllllgslvgvvfslyLiyilvfvikalClyCilsavlslvllilslk 136
                   ++ lG+++y+++l  a        l+r +   +ll++ ++ +fslyL+y+l f +++lCl+C++s+v++ +++++++ 
  MMETSP1325-20131115|15186_1   5 ANASLGAIYYMIMLGSAP-------LPRAL---TLLIASMACAFSLYLAYVLKFILEDLCLVCVSSYVVNGLIFVFAVX 73 
                  688888888888887775.......44444...4677888999*******************************99876 PP

>> PF11168.3  Protein of unknown function (DUF2955)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.5   7.2e-06     0.033      19      88 ..       2      72 ..       1      81 [. 0.84

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 7.2e-06
    PF11168.3 19 lgwplpflapvfpvlllgkvpplnlkallqlllsvvltavvglllvgllqqyPvlmll.lvalllflkfra 88
                 l+w ++ l +++ +++lg++p + + +ll   ++ ++++  + +l  +l++  ++ +   v+ +l + f++
  MMETSP1325-20131115|15186_1  2 LDWANASLGAIYYMIMLGSAPLPRALTLLIASMACAFSLYLAYVLKFILEDLCLVCVSsYVVNGLIFVFAV 72
                 79*************************************************99876641455566666655 PP

>> PF06703.6  Microsomal signal peptidase 25 kDa subunit (SPC25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   2.3e-05      0.11      35      90 ..      31      85 ..      26     101 .. 0.76

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 2.3e-05
    PF06703.6 35 vavaiaiaaflwdyklefkeskpvlaaavvlYfvlsgiltlvskfvekniiyvgkr 90
                 +a+++++++++++y l+f    ++++++v +Y+v  +i+ +    v +     g r
  MMETSP1325-20131115|15186_1 31 IASMACAFSLYLAYVLKFI-LEDLCLVCVSSYVVNGLIFVFAVXKVHGKEEAKGLR 85
                 6777888999999999996.5689**********9999888776666655555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       503  (0.0367905); expected 273.4 (0.02)
Passed bias filter:                      344  (0.0251609); expected 273.4 (0.02)
Passed Vit filter:                        19  (0.0013897); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.49
# Mc/sec: 503.72
//
Query:       MMETSP1325-20131115|15189_1  [L=92]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       133  (0.00972791); expected 273.4 (0.02)
Passed bias filter:                      129  (0.00943534); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.36s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 432.28
//
Query:       MMETSP1325-20131115|15190_1  [L=78]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-09   34.8   0.0    7.4e-09   34.7   0.0    1.0  1  PF00248.16 Aldo/keto reductase family
  ------ inclusion threshold ------
       0.12   11.9   0.0       0.23   10.9   0.0    1.6  1  PF13783.1  Domain of unknown function (DUF4177)


Domain annotation for each model (and alignments):
>> PF00248.16  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   1.1e-12   7.4e-09     234     282 ..       2      48 ..       1      49 [. 0.96

  Alignments for each domain:
  == domain 1    score: 34.7 bits;  conditional E-value: 1.1e-12
   PF00248.16 234 qlalryalsrpavgsvipgassieqleenlkalelelseeeiaeidell 282
                  q+al++++   ++ ++ipgass +q+ en++al ++ls+ee+a +d+++
  MMETSP1325-20131115|15190_1   2 QVALNWVI--CKGAIPIPGASSSQQVLENAGALGWRLSDEEVAMLDSAA 48 
                  9*******..9***********************************986 PP

>> PF13783.1  Domain of unknown function (DUF4177)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   3.4e-05      0.23      21      37 ..      21      37 ..      14      50 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 3.4e-05
    PF13783.1 21 klkeiLnelGadGWeLv 37
                   +++L + Ga GW+L 
  MMETSP1325-20131115|15190_1 21 SSQQVLENAGALGWRLS 37
                 5699***********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       203  (0.0148479); expected 273.4 (0.02)
Passed bias filter:                      200  (0.0146284); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.36s 00:00:00.70 Elapsed: 00:00:00.57
# Mc/sec: 322.27
//
Query:       MMETSP1325-20131115|15200_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.2   0.0        0.7   10.0   0.0    2.1  2  PF00560.28 Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> PF00560.28  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.013   1.8e+02       3      20 ..       5      23 ..       3      25 .. 0.74
   2 ?   10.0   0.0   5.1e-05       0.7       2      19 ..      27      47 ..      26      50 .. 0.86

  Alignments for each domain:
  == domain 1    score: 2.6 bits;  conditional E-value: 0.013
                 SEEEETSS.BCB.CHHHHHH CS
   PF00560.28  3 eeLdLsgN.nlt.slppsls 20
                 ++ dLs+  nl  ++   ++
  MMETSP1325-20131115|15200_1  5 KKVDLSRMsNLAgNIEV-FK 23
                 67899998888877776.65 PP

  == domain 2    score: 10.0 bits;  conditional E-value: 5.1e-05
                 ESEEEETSS.BCB.CHHHH.H CS
   PF00560.28  2 LeeLdLsgN.nlt.slpps.l 19
                 ++eL+L ++ nl    pp+ +
  MMETSP1325-20131115|15200_1 27 IKELNLYYCyNLIgVMPPNiF 47
                 79**********999999966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       211  (0.015433); expected 273.4 (0.02)
Passed bias filter:                      204  (0.014921); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.37s 00:00:00.65 Elapsed: 00:00:00.47
# Mc/sec: 280.42
//
Query:       MMETSP1325-20131115|15201_1  [L=101]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       213  (0.0155793); expected 273.4 (0.02)
Passed bias filter:                      205  (0.0149941); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.39s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 504.23
//
Query:       MMETSP1325-20131115|15204_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       257  (0.0187975); expected 273.4 (0.02)
Passed bias filter:                      242  (0.0177004); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 274.58
//
Query:       MMETSP1325-20131115|15208_1  [L=59]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       128  (0.0093622); expected 273.4 (0.02)
Passed bias filter:                      118  (0.00863078); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.36s 00:00:00.64 Elapsed: 00:00:00.49
# Mc/sec: 288.54
//
Query:       MMETSP1325-20131115|15215_1  [L=151]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-40  136.0   0.9    6.2e-40  135.6   0.6    1.1  1  PF00411.14 Ribosomal protein S11
  ------ inclusion threshold ------
      0.024   13.4   0.0      0.024   13.4   0.0    1.1  1  PF10009.4  Uncharacterized protein conserved in bacteria (DUF2252)


Domain annotation for each model (and alignments):
>> PF00411.14  Ribosomal protein S11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.6   0.6   9.1e-44   6.2e-40       1     110 []      29     147 ..      29     147 .. 0.99

  Alignments for each domain:
  == domain 1    score: 135.6 bits;  conditional E-value: 9.1e-44
   PF00411.14   1 giahiqasfnntiititDvkGrvvlsssaGslgvkasr.ksspyaaktaaekvakkalekgikavevkikg........pgiGkeaalralkksgliisqiedVtplphngcRkpkkrR 110
                  g+ahi asfn+t+++itD++Gr+++++ +G+++vka+r ++spyaa++aa++va+k+++ g++a+++k+++        pg+G+++alral+++g++i++iedVtp+p +++R++  rR
  MMETSP1325-20131115|15215_1  29 GVAHIFASFNDTFVHITDLSGRETIVRVTGGMKVKADRdEASPYAAMLAAQDVAEKCKAVGVTALHIKMRAtggnktktPGPGAQSALRALARAGIKIGRIEDVTPVPSDSTRRKSGRR 147
                  79******************************************************************************************************************998 PP

>> PF10009.4  Uncharacterized protein conserved in bacteria (DUF2252)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.6e-06     0.024     258     335 ..       7      83 ..       1     122 [. 0.79

  Alignments for each domain:
  == domain 1    score: 13.4 bits;  conditional E-value: 3.6e-06
    PF10009.4 258 lerlvsasepeaeekenegeRvvegqrllqaasDlfLgwteldgrsfyvRelrpmkvsldlekldkkelkeyaklcgk 335
                   e+ v++ +     k +ege v  ++ ++ +  D+f + t+l+gr+ +vR +  mkv++d ++ ++ +++ +a+ +++
  MMETSP1325-20131115|15215_1   7 KEKQVEEVTTIG-PKVSEGENVFGVAHIFASFNDTFVHITDLSGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAE 83 
                  555554444333.34799*********************************************987666665555553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       361  (0.0264043); expected 273.4 (0.02)
Passed bias filter:                      317  (0.0231861); expected 273.4 (0.02)
Passed Vit filter:                        25  (0.00182855); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.38s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 786.63
//
Query:       MMETSP1325-20131115|15220_1  [L=127]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       218  (0.015945); expected 273.4 (0.02)
Passed bias filter:                      181  (0.0132387); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.34s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 676.31
//
Query:       MMETSP1325-20131115|15214_1  [L=164]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0038   16.8   0.0     0.0046   16.5   0.0    1.1  1  PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
     0.0048   15.5   0.0     0.0054   15.4   0.0    1.0  1  PF07690.11 Major Facilitator Superfamily
      0.006   15.2   0.7     0.0092   14.6   0.5    1.2  1  PF00287.13 Sodium / potassium ATPase beta chain
  ------ inclusion threshold ------
      0.028   13.3   3.8      0.037   12.9   2.6    1.1  1  PF12698.2  ABC-2 family transporter protein
      0.061   12.0   0.7      0.077   11.7   0.5    1.1  1  PF12679.2  ABC-2 family transporter protein
       0.09   11.2   0.1       0.11   10.9   0.1    1.1  1  PF09972.4  Predicted membrane protein (DUF2207)
       0.21   11.1   2.9        0.3   10.6   2.0    1.2  1  PF04341.7  Protein of unknown function, DUF485
        0.5   10.5   3.1        6.5    6.9   0.1    2.9  3  PF09190.6  DALR domain


Domain annotation for each model (and alignments):
>> PF13903.1  PMP-22/EMP/MP20/Claudin tight junction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.7e-06    0.0046      60     111 ..      67     132 ..      32     144 .. 0.72

  Alignments for each domain:
  == domain 1    score: 16.5 bits;  conditional E-value: 2.7e-06
    PF13903.1  60 s........atalldltrvvivflllglvlillaavlallaslkksk......tlllltgvlllla 111
                  +        ++  +d+ ++ ++f l++++ +llaa++al+a+l+ +       +++l + ++++++
  MMETSP1325-20131115|15214_1  67 KeealrlkaYFLGIDTKDWLWIFGLFSVFYCLLAALFALAATLNYNAetneacVAYLVLMISTFFG 132
                  255677777888889999***********************9997765665544444444444433 PP

>> PF07690.11  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.2e-06    0.0054     198     269 ..      75     143 ..      30     150 .. 0.65

  Alignments for each domain:
  == domain 1    score: 15.4 bits;  conditional E-value: 3.2e-06
   PF07690.11 198 pawklllkppvlwillialllfffvfsglltllplylqevlglsp...glllaglllgllaligaigalllgrls 269
                    +  + ++   w+++++l+++f ++ +    l+ +   +l++++    +  a+l+l+++ ++g+++a+ lgr +
  MMETSP1325-20131115|15214_1  75 AYFLGIDTKD--WLWIFGLFSVFYCLLA---ALFAL-AATLNYNAetnEACVAYLVLMISTFFGIVIAINLGRKA 143
                  2333444444..5555555555544444...44442.55566666667458888899*******999*9999976 PP

>> PF00287.13  Sodium / potassium ATPase beta chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.5   5.4e-06    0.0092      28      58 ..      76     106 ..      72     116 .. 0.89

  Alignments for each domain:
  == domain 1    score: 14.6 bits;  conditional E-value: 5.4e-06
   PF00287.13  28 ellGRtassWalillfYvvFYgllaglFalt 58 
                   +lG  ++ W +i+  + vFY lla+lFal+
  MMETSP1325-20131115|15214_1  76 YFLGIDTKDWLWIFGLFSVFYCLLAALFALA 106
                  699999**********************986 PP

>> PF12698.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.6   2.2e-05     0.037     227     285 ..      77     135 ..      70     143 .. 0.65

  Alignments for each domain:
  == domain 1    score: 12.9 bits;  conditional E-value: 2.2e-05
    PF12698.2 227 afglegipfgnlllllllfllfglayialgyllssl...fksestaqlvisililllsgffl 285
                  ++g   i+ +++l++++lf +f+ + +al++l ++l     + +++ ++++++i++++g+ +
  MMETSP1325-20131115|15214_1  77 FLG---IDTKDWLWIFGLFSVFYCLLAALFALAATLnynAETNEACVAYLVLMISTFFGIVI 135
                  566...8888******8888888888888888888844433335555554444443333333 PP

>> PF12679.2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.5   4.5e-05     0.077     152     208 ..      84     136 ..      71     150 .. 0.81

  Alignments for each domain:
  == domain 1    score: 11.7 bits;  conditional E-value: 4.5e-05
    PF12679.2 152 gdlllllllsvllllavlvflalgllvSsvlkssstaaaaalvllfllsllspilvl 208
                  ++l+ + l+sv++ l     +al+ l +++  +  t  a++  l+++ s +++i+ +
  MMETSP1325-20131115|15214_1  84 DWLWIFGLFSVFYCL----LAALFALAATLNYNAETNEACVAYLVLMISTFFGIVIA 136
                  567888888888877....49999999999999999999999999999999999875 PP

>> PF09972.4  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   6.5e-05      0.11     371     453 ..      57     140 ..      48     158 .. 0.62

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 6.5e-05
    PF09972.4 371 wqksvkeearkkglfdeyrylrsnekklgllilgilllilsfiliifllalfaglllaalvllvivlvigliialll...lrkllg 453
                  +++++k+ ++k++ ++ ++y+    +k  l+i+g+++++ ++++   l+al a l+ +a  + + v+ ++l+i++++     ++lg
  MMETSP1325-20131115|15214_1  57 YRNDLKTDKEKEEALRLKAYFLGIDTKDWLWIFGLFSVFYCLLAA--LFALAATLNYNAETNEACVAYLVLMISTFFgivIAINLG 140
                  678888888888888888888888877778888888888888877..555555555444444444444444444444333233333 PP

>> PF04341.7  Protein of unknown function, DUF485
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.0   0.00018       0.3      23      86 ..      90     152 ..      84     157 .. 0.87

  Alignments for each domain:
  == domain 1    score: 10.6 bits;  conditional E-value: 0.00018
    PF04341.7  23 almlvlYfgfillvafapellgtklaeGaitvgillglgqfvltflltglYvrrAnrefDplaa 86 
                   l+ v+Y ++ +l+a+a ++l+ +  + + +v++l+ +   ++ +++++   r+A++e  ++aa
  MMETSP1325-20131115|15214_1  90 GLFSVFYCLLAALFALA-ATLNYNAETNEACVAYLVLMISTFFGIVIAINLGRKAREEAAAEAA 152
                  57899************.********89********************9999999997766655 PP

>> PF09190.6  DALR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.58   9.9e+02      33      54 ..      59      80 ..      47      86 .. 0.68
   2 ?    6.9   0.1    0.0038       6.5      16      35 ..      99     117 ..      99     134 .. 0.67
   3 ?    3.3   0.0     0.052        89      16      41 ..     127     152 ..     124     161 .. 0.70

  Alignments for each domain:
  == domain 1    score: -0.1 bits;  conditional E-value: 0.58
    PF09190.6 33 edkaalsalaallrelagvLGl 54
                 +d +++++++++lr  a  LG+
  MMETSP1325-20131115|15214_1 59 NDLKTDKEKEEALRLKAYFLGI 80
                 4556666667777777888888 PP

  == domain 2    score: 6.9 bits;  conditional E-value: 0.0038
    PF09190.6  16 lavLFdLakeiNkaekgedk 35 
                  la+LF La ++N  ++++++
  MMETSP1325-20131115|15214_1  99 LAALFALAATLNY-NAETNE 117
                  79**********9.333333 PP

  == domain 3    score: 3.3 bits;  conditional E-value: 0.052
    PF09190.6  16 lavLFdLakeiNkaekgedkaalsal 41 
                  ++ +F ++ +iN + k++++aa++a+
  MMETSP1325-20131115|15214_1 127 ISTFFGIVIAINLGRKAREEAAAEAA 152
                  7899*********5555555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       862  (0.0630486); expected 273.4 (0.02)
Passed bias filter:                      632  (0.0462259); expected 273.4 (0.02)
Passed Vit filter:                        94  (0.00687537); expected 13.7 (0.001)
Passed Fwd filter:                         8  (0.000585138); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.52u 0.38s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 836.18
//
Query:       MMETSP1325-20131115|15223_1  [L=64]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.014   15.2   3.6      0.021   14.7   2.5    1.4  1  PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
      0.026   14.2   0.0      0.028   14.1   0.0    1.2  1  PF01797.11 Transposase IS200 like
       0.15   12.0   2.5       0.51   10.2   0.2    1.9  2  PF02403.17 Seryl-tRNA synthetase N-terminal domain
       0.17   11.2   2.2       0.22   10.9   1.6    1.2  1  PF13942.1  YfhG lipoprotein
       0.64    8.7   4.8       0.68    8.6   3.3    1.1  1  PF04111.7  Autophagy protein Apg6
        1.2    9.0   9.4       0.42   10.5   2.4    2.0  2  PF14197.1  Centrosome localisation domain of PPC89


Domain annotation for each model (and alignments):
>> PF10473.4  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   2.5   9.3e-06     0.021      59     108 ..       3      52 ..       1      64 [] 0.68

  Alignments for each domain:
  == domain 1    score: 14.7 bits;  conditional E-value: 9.3e-06
    PF10473.4  59 tkieemaeelkdLeldLvsvrsekenLakelqekqervseLeklnsslkn 108
                  ++ +e+ ++l++   +Lv vrse+++L  el+ +   ++ + ++  ++++
  MMETSP1325-20131115|15223_1   3 AERDELSKRLEEKDAELVAVRSERDHLHMELEMQGPDMDHIVETAEQVAR 52 
                  67899999999999999999999999999998765555544444444433 PP

>> PF01797.11  Transposase IS200 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.2e-05     0.028      32      62 ..       9      39 ..       5      62 .. 0.80

  Alignments for each domain:
  == domain 1    score: 14.1 bits;  conditional E-value: 1.2e-05
                 HHHHHH---EEEEEEEETTEEEEEEEE-TTS CS
   PF01797.11 32 reiaeekevelleingmpDHvHllvelppkl 62
                 ++  eek+ el+++  ++DH+H+ +e++   
  MMETSP1325-20131115|15223_1  9 SKRLEEKDAELVAVRSERDHLHMELEMQGPD 39
                 566799*****************99997655 PP

>> PF02403.17  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.2   0.00023      0.51      72     104 ..       1      33 [.       1      35 [. 0.91
   2 ?    2.5   0.1     0.054   1.2e+02      66      91 ..      37      62 ..      31      63 .. 0.65

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00023
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS CS
   PF02403.17  72 liaevkelkeelkaleaelkeleaeleklllsi 104
                  l+ae +el+++l++++ael +++ e ++l +++
  MMETSP1325-20131115|15223_1   1 LVAERDELSKRLEEKDAELVAVRSERDHLHMEL 33 
                  67999********************99998765 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.054
                 .HHCCCHHHHHHHHHHHHHHHHHHHH CS
   PF02403.17 66 kedaeeliaevkelkeelkaleaelk 91
                 + d +++++++++++ + + l++elk
  MMETSP1325-20131115|15223_1 37 GPDMDHIVETAEQVARQRDRLQEELK 62
                 56666777777777777777776664 PP

>> PF13942.1  YfhG lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.6   9.6e-05      0.22     114     167 ..       1      54 [.       1      63 [. 0.82

  Alignments for each domain:
  == domain 1    score: 10.9 bits;  conditional E-value: 9.6e-05
    PF13942.1 114 laeerarykrlqqesdskldalreqqakLqaeLetttrKLenLtdiERqLssRk 167
                  l +er   ++  +e+d++l a+r+++++L++eLe+    ++++ +   q++  +
  MMETSP1325-20131115|15223_1   1 LVAERDELSKRLEEKDAELVAVRSERDHLHMELEMQGPDMDHIVETAEQVARQR 54 
                  5678899999999*********************99888888887777766544 PP

>> PF04111.7  Autophagy protein Apg6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.3    0.0003      0.68      70     125 ..       3      58 ..       1      64 [] 0.84

  Alignments for each domain:
  == domain 1    score: 8.6 bits;  conditional E-value: 0.0003
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    PF04111.7  70 seldeLkkeeerlleeleelekeedkldeeleelqeekekleeeeeqylrelnkfk 125
                   e deL k  e++  el  +++e+d+l+ ele    + +++ e  eq  r+  +++
  MMETSP1325-20131115|15223_1   3 AERDELSKRLEEKDAELVAVRSERDHLHMELEMQGPDMDHIVETAEQVARQRDRLQ 58 
                  699****************************9999888888888888877766665 PP

>> PF14197.1  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.4   0.00018      0.42      31      65 ..       1      35 [.       1      37 [. 0.92
   2 ?    2.5   0.2     0.054   1.2e+02      47      64 ..      45      62 ..      41      64 .] 0.76

  Alignments for each domain:
  == domain 1    score: 10.5 bits;  conditional E-value: 0.00018
    PF14197.1 31 LnkErdsalrqLgvAyeelneLkaevealrkELee 65
                 L +Erd+  ++L+++  el+  ++e ++l  ELe 
  MMETSP1325-20131115|15223_1  1 LVAERDELSKRLEEKDAELVAVRSERDHLHMELEM 35
                 678***************************99985 PP

  == domain 2    score: 2.5 bits;  conditional E-value: 0.054
    PF14197.1 47 eelneLkaevealrkELe 64
                 e++++  ++ ++l++EL+
  MMETSP1325-20131115|15223_1 45 ETAEQVARQRDRLQEELK 62
                 566777788888998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       918  (0.0671445); expected 273.4 (0.02)
Passed bias filter:                      709  (0.0518578); expected 273.4 (0.02)
Passed Vit filter:                        87  (0.00636337); expected 13.7 (0.001)
Passed Fwd filter:                         6  (0.000438853); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.36u 0.45s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 306.73
//
Query:       MMETSP1325-20131115|15224_1  [L=144]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      147  (0.0107519); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.34s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 750.16
//
Query:       MMETSP1325-20131115|15225_1  [L=36]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (36 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       134  (0.00980105); expected 273.4 (0.02)
Passed bias filter:                      130  (0.00950848); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.33s 00:00:00.63 Elapsed: 00:00:00.48
# Mc/sec: 179.73
//
Query:       MMETSP1325-20131115|15229_1  [L=72]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       142  (0.0103862); expected 273.4 (0.02)
Passed bias filter:                      138  (0.0100936); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.37s 00:00:00.70 Elapsed: 00:00:00.49
# Mc/sec: 352.12
//
Query:       MMETSP1325-20131115|15228_1  [L=301]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-88  294.4   0.2    4.7e-88  294.1   0.1    1.1  1  PF04670.7  Gtr1/RagA G protein conserved region
    4.4e-10   38.9   0.0      7e-10   38.3   0.0    1.4  1  PF00025.16 ADP-ribosylation factor family
    6.8e-09   35.2   0.0    1.4e-08   34.1   0.0    1.5  1  PF00071.17 Ras family
    6.1e-05   23.3   0.0    0.00017   21.9   0.0    1.8  2  PF08477.8  Miro-like protein
    0.00088   18.4   0.0     0.0015   17.6   0.0    1.4  1  PF09439.5  Signal recognition particle receptor beta subunit
     0.0021   17.9   0.0     0.0044   16.8   0.0    1.6  1  PF01926.18 50S ribosome-binding GTPase
     0.0024   16.9   2.4      0.022   13.7   1.7    2.3  1  PF04548.11 AIG1 family
     0.0041   16.4   0.0       0.01   15.1   0.0    1.6  1  PF00009.22 Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.014   13.9   4.8       0.03   12.9   0.2    2.4  2  PF00503.15 G-protein alpha subunit
      0.042   12.8   0.1        1.6    7.6   0.0    2.2  2  PF06414.7  Zeta toxin
      0.048   13.0   0.1       0.14   11.5   0.0    1.8  2  PF10662.4  Ethanolamine utilisation - propanediol utilisation
      0.069   13.3   0.1       0.34   11.1   0.0    2.1  1  PF13191.1  AAA ATPase domain
      0.082   12.0   0.0      0.082   12.0   0.0    1.2  1  PF12846.2  AAA-like domain
        0.1   11.9   0.0       0.14   11.4   0.0    1.3  1  PF00270.24 DEAD/DEAH box helicase
       0.24   11.1   1.4       0.36   10.5   0.1    2.0  3  PF06279.6  Protein of unknown function (DUF1033)


Domain annotation for each model (and alignments):
>> PF04670.7  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.1   0.1   5.2e-91   4.7e-88       1     231 []       2     230 ..       2     230 .. 0.98

  Alignments for each domain:
  == domain 1    score: 294.1 bits;  conditional E-value: 5.2e-91
    PF04670.7   1 klLLmGksgsGKtSmrsiiFsnylardtlrLgaTidveqshvrflgnlklnlwDcgGqeefvenylsrqkeeifsnvevliyVfDiesreleedlekfqeileallqyspeakvfvlihKmDlisedereeifeerkeeireeiedleieeleffaTSiwdeslykAwSkvvqklipnlsvleelLkklaesinaeevlLferstflviatdsrkeaekdaerfekvseii 231
                  k+LLmGksgsGKtSmrsiiF++ylardt+rL  Tidve s+v+flgnl+l+lwDcgGq++f +nyl + +++if++ve l+yVfDie  + + dl++f+ + eal q+sp+a vfvl+hKmDl++e+er+ +f+er++ i+e++++l ++ +++f +Siwde+ly+AwS++v++l+pn++ le++L+++++++  +ev+Lfe++tflvia+ +  ++++d++rfek+s+ii
  MMETSP1325-20131115|15228_1   2 KVLLMGKSGSGKTSMRSIIFADYLARDTTRLSPTIDVEYSSVQFLGNLHLHLWDCGGQDDFYKNYLDNMRDHIFRSVELLVYVFDIEHFD-QIDLKQFEAVAEALDQHSPDALVFVLLHKMDLVAEEERSLVFRERESLINECTRNLAVR-VKCFPSSIWDETLYRAWSQIVYSLVPNTKLLEDNLNDFCKICGSDEVVLFESTTFLVIAHCEDGSKHSDVHRFEKISNII 230
                  8**************************************************************************************444.779****************************************************9966.**************************************************************8888899*********98 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   7.7e-13     7e-10      16     134 ..       2     130 ..       1     171 [. 0.80

  Alignments for each domain:
  == domain 1    score: 38.3 bits;  conditional E-value: 7.7e-13
                  EEEEE--TT---HH....HHHHHHHS-EEEE-S--S-EEEEEEE.TTEEEEEEE----GG.....GGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---HH CS
   PF00025.16  16 rilllGLDnaGKtT....ilkklkleelvttvPTigfnveelei.knlkftvwDvGGqek.....lRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealsee 134
                  ++ll+G  ++GKt     i   +   ++++ +PTi  +  ++++  nl++++wD GGq+      l ++ ++ f++++ +++v D  + + ++  + e  a   +++  ++ + vl  K+Dl    +++
  MMETSP1325-20131115|15228_1   2 KVLLMGKSGSGKTSmrsiIFADYLARDTTRLSPTIDVEYSSVQFlGNLHLHLWDCGGQDDfyknyLDNMRDHIFRSVELLVYVFDIEHFDQIDLKQFEAVAEALDQHSPDALVFVLLHKMDLVAEEERS 130
                  89**********974443678899999999*************869************9721111344567899******************998888777677778889***********98665544 PP

>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.0   1.5e-11   1.4e-08       1     120 [.       2     129 ..       2     152 .. 0.74

  Alignments for each domain:
  == domain 1    score: 34.1 bits;  conditional E-value: 1.5e-11
                  EEEEE-------HHHHHHHHHSSS-...SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGG.....HHHHHHHHHT-SEEEEE--TT-HH..HHHTHHHHHHHHHHHSTTTSSEEEE---TTGGG..G- CS
   PF00071.17   1 KlvlvGdsavGKtslllrfvedkFk...eeyesTigvdfytkeievdgkevkleiwDTAGqeef.....kslrslyyrdaegillvyditsre..sfenvkkwveeikrvaeenvpivLvGnKvDlee..kr 120
                  K++l+G+s+ GKts+      d+     ++  +Ti  d   +++++ g +++l++wD  Gq++f     +++r+  +r++e ++ v+di++ +   +++ +   e + ++ ++ +++vL+  K+Dl    +r
  MMETSP1325-20131115|15228_1   2 KVLLMGKSGSGKTSMRSIIFADYLArdtTRLSPTI--DVEYSSVQFLG-NLHLHLWDCGGQDDFyknylDNMRDHIFRSVELLVYVFDIEHFDqiDLKQFEAVAEALDQHSPDALVFVLL-HKMDLVAeeER 129
                  89************987777776651114568999..54455555544.689***********955555679*****************9765115778888999999999976666665.89999763344 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   1.9e-07   0.00017       1      84 [.       2      88 ..       2     120 .. 0.75
   2 ?   -2.9   0.0         9   8.2e+03      76     102 ..     204     229 ..     196     242 .. 0.62

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 1.9e-07
    PF08477.8  1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggr.....eelkkehelllkkadaillvydlt 84
                 kv+++G++g+GK+s+ s ++ +      +++ + + ++   +++  ++ +l +lwd+gg+      +l+ + +++++++   + v+d++
  MMETSP1325-20131115|15228_1  2 KVLLMGKSGSGKTSMRSIIFADYLA-RDTTRLSPTIDVEYSSVQFLGNLHL-HLWDCGGQddfykNYLDNMRDHIFRSVELLVYVFDIE 88
                 899***********97777765555.6666666677777667777777766.********55555555666677788888888888876 PP

  == domain 2    score: -2.9 bits;  conditional E-value: 9
    PF08477.8  76 aillvydltdeesleevsellawlael 102
                   +l++  ++d++  ++v ++ ++++++
  MMETSP1325-20131115|15228_1 204 TFLVIAHCEDGSKHSDVHRF-EKISNI 229
                  45555556666666666555.444444 PP

>> PF09439.5  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.6e-06    0.0015       5      99 ..       2     105 ..       1     128 [. 0.83

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 1.6e-06
                  EEEEE--TT---HHHHHHHHHSS-------SS-EEETT-...-...----EEEE----GGGGHHHHHHHHHH..GGB---EEEEE....TTS-TT--HHHHHHH CS
    PF09439.5   5 avllvGlsdsGKTslftrLttdsvkktvtSqessaalkvksek...gkkltliDfPGheklrqklleklkak..sslkglvfvvD....StidpkevkevAEll 99 
                  +vll+G s sGKTs+   +  d   +  t + +++  +++s +   + +l+l D  G++ + ++ l++++++  +s+  lv+v D      id k+ + vAE l
  MMETSP1325-20131115|15228_1   2 KVLLMGKSGSGKTSMRSIIFADYLARDTTRLSPTIDVEYSSVQflgNLHLHLWDCGGQDDFYKNYLDNMRDHifRSVELLVYVFDiehfDQIDLKQFEAVAEAL 105
                  69********************8888778888888888765543338899******************9876446799*******4443467888999999987 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   4.9e-06    0.0044       1      99 [.       2     102 ..       2     132 .. 0.70

  Alignments for each domain:
  == domain 1    score: 16.8 bits;  conditional E-value: 4.9e-06
                  EEEEE--TT---HHHHHHHHCSTCTEETS-TT-SSSESEEEE...ETTE..EEEEE---SSSHHHHHHH.HHHHHHHHHHH.CTSSEEEEEEETTSHHHH...HHHHHH CS
   PF01926.18   1 evaivGrpNvGKStLinaLtgekaakvsdypgtTrditenev...kkek..iilvDtPGiiegasedke.iegikkylekv.eradvlllvvdasavlke...adkell 99 
                  +v ++G++ +GK+++   ++ +  a+ +     T d+++ +v      +  + l+D+ G       d+  ++ ++++ +++ + +++l++v+d+++  +    + ++++
  MMETSP1325-20131115|15228_1   2 KVLLMGKSGSGKTSMRSIIFADYLARDTTRLSPTIDVEYSSVqflG--NlhLHLWDCGGQ------DDFyKNYLDNMRDHIfRSVELLVYVFDIEHFDQIdlkQFEAVA 102
                  5899***********9999976677777777788888775544332..13247******2......3331336677899999999********9983333122333443 PP

>> PF04548.11  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   1.7   2.4e-05     0.022       2     157 ..       2     151 ..       1     163 [. 0.82

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 2.4e-05
                  EEEEE-------TT---TTTTS--S-----------S-EEEEE.EETTEEEEEEE--CGCCTTCH.HCCHHHHHHHHHHHH-----EEEEEEE----SHHHHHHHHHHHHH---GGGGGEEEEEEEGGGG----HCCHHHH---HHHHHHHHH----E CS
   PF04548.11   2 tivlvGktgnGkSaTgNsilgkkaFesklsaqsvtkkcqkksr.twdgkkinViDTPglfdlsvs.adkiskeivrclllseegihalllvlslgrfteedekalktlkelFGekilkylivvftrkddleddsledylsksspeaLkevlkecgnRv 157
                  +++l+Gk+g+Gk +   si+  ++    ++  s t  ++ +s     + +++  D  g  d  ++  d+++ +i r       +++ l++v+++++f++ d k ++++ e+ +++  + l++v+ +k dl +++    + ++    ++e  +++  Rv
  MMETSP1325-20131115|15228_1   2 KVLLMGKSGSGKTS-MRSIIFADYLARDTTRLSPTIDVEYSSVqFLGNLHLHLWDCGGQDDFYKNyLDNMRDHIFR-------SVELLVYVFDIEHFDQIDLKQFEAVAEALDQHSPDALVFVLLHKMDLVAEEERSLVFRERESLINECTRNLAVRV 151
                  689*********87.5799999998888888888888888888577779999999999988766438899999997.......6889******************************************99998666665555555666666555555 PP

>> PF00009.22  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.1e-05      0.01      55     157 ..      35     146 ..       6     190 .. 0.73

  Alignments for each domain:
  == domain 1    score: 15.1 bits;  conditional E-value: 1.1e-05
                  BBSSEEEEEET.ESCEEEEEEE----GGGHHHHHHH.....HHT-SEEEEEEETTS-..S-.HHHHHHHHHHHHTT--..EEEEEE-TTSTCHHHHHHHHHHHHHHHHHCTTG CS
   PF00009.22  55 TiksaaisleketkkrlinliDtPGHvdFskevirg.....lrvlDgavlvvdaveG..ve.pqTeevlrlakklgvk..iivviNKiDrveaeleeiveelkekllekylek 157
                  Ti++++ s++    + +++l D+ G +dF k+ +        r +++ v v+d ++   +   q e v+++++++     ++v++ K+D+v +e + +v   +e l+++ + +
  MMETSP1325-20131115|15228_1  35 TIDVEYSSVQ-FLGNLHLHLWDCGGQDDFYKNYLDNmrdhiFRSVELLVYVFDIEHFdqIDlKQFEAVAEALDQHSPDalVFVLLHKMDLVAEEERSLVFRERESLINECTRN 146
                  8888888888.78899***************99988455556789*********9654454145555555555555559889999******6666666655555665555443 PP

>> PF00503.15  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.4      0.05        45      60      73 ..       2      15 ..       1      22 [. 0.90
   2 ?   12.9   0.2   3.3e-05      0.03     222     265 ..      41      94 ..      23     100 .. 0.82

  Alignments for each domain:
  == domain 1    score: 2.4 bits;  conditional E-value: 0.05
                 EEEEEXXXXXXXHH CS
   PF00503.15 60 klLlLGqgeSGKsT 73
                 k+Ll+G ++SGK+ 
  MMETSP1325-20131115|15228_1  2 KVLLMGKSGSGKTS 15
                 89**********97 PP

  == domain 2    score: 12.9 bits;  conditional E-value: 3.3e-05
                  ......XXXEEEEEEXXXXGGGGGGTGGGXX.....XXXEEEEEEEGGGTTXBX CS
   PF00503.15 222 e.....sktefrlvDvGGqrserkkWipcfe.....dvdaiiFlvslsefdqvl 265
                  +     ++ +++l+D+GGq + +k+++  +      +v+ ++++  ++ fdq+ 
  MMETSP1325-20131115|15228_1  41 SsvqflGNLHLHLWDCGGQDDFYKNYLDNMRdhifrSVELLVYVFDIEHFDQID 94 
                  2334448999***********999988655567777****************85 PP

>> PF06414.7  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0018       1.6      19      45 ..       3      29 ..       1      35 [. 0.78
   2 ?    3.0   0.0     0.046        42      49     103 ..      91     145 ..      84     153 .. 0.85

  Alignments for each domain:
  == domain 1    score: 7.6 bits;  conditional E-value: 0.0018
    PF06414.7 19 vllgGqpGAGKtslaellleelaagni 45
                 vll G  G+GKts+++ +  ++ a+++
  MMETSP1325-20131115|15228_1  3 VLLMGKSGSGKTSMRSIIFADYLARDT 29
                 8999**********9988776655555 PP

  == domain 2    score: 3.0 bits;  conditional E-value: 0.046
    PF06414.7  49 daDelrkyhpayrelekkdpkeaseltqkdaselveklidralekgyniilegtl 103
                  d  +l+++ +  ++l ++ p+ ++ ++  ++  ++e+ ++ +++++ ++i e+t 
  MMETSP1325-20131115|15228_1  91 DQIDLKQFEAVAEALDQHSPDALVFVLLHKMDLVAEEERSLVFRERESLINECTR 145
                  5557777777777777789*********************************995 PP

>> PF10662.4  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00016      0.14       3      25 ..       2      24 ..       1      40 [. 0.81
   2 ?   -2.7   0.0       3.6   3.3e+03      49      75 ..     250     276 ..     245     287 .. 0.61

  Alignments for each domain:
  == domain 1    score: 11.5 bits;  conditional E-value: 0.00016
    PF10662.4  3 killiGkvgaGKTtLtqalkgee 25
                 k+ll+Gk+g+GKT++   +  + 
  MMETSP1325-20131115|15228_1  2 KVLLMGKSGSGKTSMRSIIFADY 24
                 89************987766555 PP

  == domain 2    score: -2.7 bits;  conditional E-value: 3.6
    PF10662.4  49 enrrlysalivtaadadvialvqdate 75 
                  +n r++  ++ ++ ++ ++++v d++ 
  MMETSP1325-20131115|15228_1 250 QNSRFTAFFNLFTSNTCIMVIVSDTDI 276
                  555555666666666666666666554 PP

>> PF13191.1  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00037      0.34      26      90 ..       3      74 ..       2     126 .. 0.67

  Alignments for each domain:
  == domain 1    score: 11.1 bits;  conditional E-value: 0.00037
    PF13191.1 26 llvtGpsGiGKSsLlrelakpillerlrfaagkfdqllrnlpysaiiqa.......lrellrqlltelaael 90
                 +l+ G sG+GK+s+   + +  l+++  +++  +d  + +++++    +       +++++++ l++ ++ +
  MMETSP1325-20131115|15228_1  3 VLLMGKSGSGKTSMRSIIFADYLARDTTRLSPTIDVEYSSVQFLGNLHLhlwdcggQDDFYKNYLDNMRDHI 74
                 79*************998888888888888888888888754444433355555555555555555555555 PP

>> PF12846.2  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     9e-05     0.082       5      67 ..       4      68 ..       2     248 .. 0.77

  Alignments for each domain:
  == domain 1    score: 12.0 bits;  conditional E-value: 9e-05
    PF12846.2  5 lilGppGsGKSvllkklvlqllargprvvii..DpggeysglaralggqvidlgegkgislNPfd 67
                 l+ G++GsGK++    ++ ++lar++  + +  D++++++++   l+    d+g+  + + N +d
  MMETSP1325-20131115|15228_1  4 LLMGKSGSGKTSMRSIIFADYLARDTTRLSPtiDVEYSSVQFLGNLHLHLWDCGGQDDFYKNYLD 68
                 789********999999******9955555556*******9999885577777777777755555 PP

>> PF00270.24  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00015      0.14      16      74 ..       2     194 ..       1     234 [. 0.84

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 0.00015
                  EEEEEC-TT---HHHHHHHHHHHHHH..HTTSTS.........................................................................................................................................EEEE.EESSHHHHHHHHHHHHHHTTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................................................................................................................................xxxx.xxxxxxxxxxxxxxxxxxxxx RF
   PF00270.24  16 dvlvaaeTGsGKTlaflipvlqilletlkkttik.........................................................................................................................................kali.vaPtreLaeqtlnnlkkfkky 74 
                  +vl+ ++ GsGKT + +i   + l++                                                                                                                                                 ++++ ++P ++L e+ ln++ k++  
  MMETSP1325-20131115|15228_1   2 KVLLMGKSGSGKTSMRSIIFADYLARDTT----RlsptidveyssvqflgnlhlhlwdcggqddfyknyldnmrdhifrsvellvyvfdiehfdqidlkqfeavaealdqhspdalvfvllhkmdlvaeeerslvfrereslinectrnlavrvkcfpssiwdetlyrawsQIVYsLVPNTKLLEDNLNDFCKICGS 194
                  58999*************99999977433....1235566899999999**************************************************************************99999999999999998888888888888888888888888888888844443788888888888888777765 PP

>> PF06279.6  Protein of unknown function (DUF1033)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       4.9   4.5e+03      28      40 ..      96     108 ..      86     143 .. 0.64
   2 ?   -3.3   0.0       7.5   6.8e+03      70      86 ..     186     203 ..     179     210 .. 0.67
   3 ?   10.5   0.1   0.00039      0.36      26      71 ..     219     264 ..     211     269 .. 0.90

  Alignments for each domain:
  == domain 1    score: -2.7 bits;  conditional E-value: 4.9
    PF06279.6  28 kefedyeealkay 40 
                  k+fe + eal+++
  MMETSP1325-20131115|15228_1  96 KQFEAVAEALDQH 108
                  4555555555443 PP

  == domain 2    score: -3.3 bits;  conditional E-value: 7.5
    PF06279.6  70 kewCedCd.edlqqyhsl 86 
                  + +C  C  +++  + s 
  MMETSP1325-20131115|15228_1 186 NDFCKICGsDEVVLFEST 203
                  679999962556677665 PP

  == domain 3    score: 10.5 bits;  conditional E-value: 0.00039
    PF06279.6  26 eekefedyeealkaykklieklkeeyeeykskkdlltafwneedke 71 
                  + ++fe++++++k++k    k ++++e + ++++ +taf+n   ++
  MMETSP1325-20131115|15228_1 219 DVHRFEKISNIIKQFKLSCRKAQAQFEGMVVQNSRFTAFFNLFTSN 264
                  6789************************************966555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       577  (0.042203); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        72  (0.00526624); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.71u 0.41s 00:00:01.11 Elapsed: 00:00:00.52
# Mc/sec: 1387.12
//
Query:       MMETSP1325-20131115|15230_1  [L=128]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-08   32.3   4.9    6.1e-07   29.3   0.9    2.3  2  PF11396.3 Protein of unknown function (DUF2874)
  ------ inclusion threshold ------
       0.27   11.4   2.0        2.2    8.5   0.0    2.1  2  PF10850.3 Protein of unknown function (DUF2653)


Domain annotation for each model (and alignments):
>> PF11396.3  Protein of unknown function (DUF2874)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.9     9e-11   6.1e-07       7      54 .]       3      46 ..       2      46 .. 0.98
   2 !    4.5   0.1    0.0049        34       7      27 ..      63      83 ..      58     106 .. 0.78

  Alignments for each domain:
  == domain 1    score: 29.3 bits;  conditional E-value: 9e-11
    PF11396.3  7 naikksYpgakiveiekeekkggkyYevelekgnnekevyfdedGewl 54
                 +a+ ++Y++ak v +        + Y+ve+e+++ +k++ f +dG+w+
  MMETSP1325-20131115|15230_1  3 KAFDSKYKKAKNVSWSTYS----STYKVEFEHDGFDKKASFRKDGTWI 46
                 79*****************....************************7 PP

  == domain 2    score: 4.5 bits;  conditional E-value: 0.0049
    PF11396.3  7 naikksYpgakiveiekeekk 27
                 ++i+ +Y++a i e+ ++e +
  MMETSP1325-20131115|15230_1 63 EYIEDEYSDASILEAIYIESP 83
                 7999**********9888833 PP

>> PF10850.3  Protein of unknown function (DUF2653)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0   0.00033       2.2      35      72 ..      33      70 ..      18      81 .. 0.86
   2 ?    2.7   0.3      0.02   1.4e+02      20      42 ..     101     125 ..      91     128 .] 0.83

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00033
    PF10850.3 35 YdddtGfsaevevnlrkkelvtkdliealreflkeeln 72
                 +d+++ f  + +      el+ +dl e l+e++++e+ 
  MMETSP1325-20131115|15230_1 33 FDKKASFRKDGTWIETSTELLVEDLTECLIEYIEDEYS 70
                 788999999999999999*****************986 PP

  == domain 2    score: 2.7 bits;  conditional E-value: 0.02
    PF10850.3  20 ekreiePedvev..eLsYdddtGfs 42 
                  e++++ePed +   +L+++ d  f 
  MMETSP1325-20131115|15230_1 101 EEEDVEPEDYIFyaNLVFNSDCEFL 125
                  6899*****9877799999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       616  (0.0450556); expected 273.4 (0.02)
Passed bias filter:                      459  (0.0335723); expected 273.4 (0.02)
Passed Vit filter:                        39  (0.00285255); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.42s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 589.87
//
Query:       MMETSP1325-20131115|15233_1  [L=67]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.13   12.2   0.1       0.22   11.4   0.1    1.4  1  PF01985.16 CRS1 / YhbY (CRM) domain


Domain annotation for each model (and alignments):
>> PF01985.16  CRS1 / YhbY (CRM) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   1.6e-05      0.22      21      44 ..      35      58 ..      22      58 .. 0.93

  Alignments for each domain:
  == domain 1    score: 11.4 bits;  conditional E-value: 1.6e-05
   PF01985.16 21 aiGkngltegvveeieealekreL 44
                  iG+++l++++v e++  l+k+eL
  MMETSP1325-20131115|15233_1 35 YIGRAELSDELVGELRHLLRKHEL 58
                 69*********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.36s 00:00:00.69 Elapsed: 00:00:00.47
# Mc/sec: 341.61
//
Query:       MMETSP1325-20131115|15237_1  [L=62]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.51   10.5   4.1        0.6   10.2   2.8    1.1  1  PF02304.10 Scaffold protein B


Domain annotation for each model (and alignments):
>> PF02304.10  Scaffold protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.8   4.4e-05       0.6      22      69 ..      10      58 ..       2      61 .. 0.70

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 4.4e-05
   PF02304.10 22 lrneaavndsseqgglngtepsglrrdpvq.sdleaerqkraeieagks 69
                 ++   +  +s+  +++    p+ l+r+      +eaer++r ++e+ + 
  MMETSP1325-20131115|15237_1 10 AQRVMVKEGSAGMQKSTRLTPEALQRNELEdVTSEAERRERRKVEHSRR 58
                 3444556677777777777788887776651579************885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       655  (0.0479081); expected 273.4 (0.02)
Passed bias filter:                      404  (0.0295494); expected 273.4 (0.02)
Passed Vit filter:                        27  (0.00197484); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 297.15
//
Query:       MMETSP1325-20131115|15227_1  [L=365]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00031   20.3   7.3    0.00047   19.7   5.1    1.2  1  PF04949.8 Transcriptional activator
  ------ inclusion threshold ------
       0.99    9.1   7.1        1.4    8.5   4.9    1.3  1  PF06459.7 Ryanodine Receptor TM 4-6
        3.9    7.3  12.4        4.9    7.0   8.0    1.5  1  PF08432.5 Fungal protein of unknown function (DUF1742)


Domain annotation for each model (and alignments):
>> PF04949.8  Transcriptional activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   5.1     1e-07   0.00047      23     147 ..     225     349 ..     205     361 .. 0.86

  Alignments for each domain:
  == domain 1    score: 19.7 bits;  conditional E-value: 1e-07
    PF04949.8  23 ekdeelsrsalslfkakeeeierkklevrervqaqlGrveeeskrlaeireelegladPmrkevevvrkkidsvnrelkplGktvqkkekeykealeayneknkekaelvtkllelvgeseklrm 147
                  + + +  ++a + + a  + +e k   v   + ++   + +e+k la  + e+  +     +++ + r +++ ++r+l  l +    ke  y +a e y  ++  k  +v++l  l+ ++e+ + 
  MMETSP1325-20131115|15227_1 225 SDNTKKGEEAKAELEASKKSVESKERAVAAALAERKAALAKEAKALASAQSEMHDIQSKESRDIGLARTQLEILDRDLAYLERDFRAKEAAYIAAKEKYTRRADAKRLMVEQLTMLMLNAERRKE 349
                  4444555667777888888889999999999999999999****************************************************************************999998665 PP

>> PF06459.7  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   4.9   0.00032       1.4      35     143 ..     170     285 ..     134     318 .. 0.43

  Alignments for each domain:
  == domain 1    score: 8.5 bits;  conditional E-value: 0.00032
    PF06459.7  35 tgeteeeevgsdafgldvkkeggkrhdaepgLgdvsevepeepptpeeaaaekk.....elkeeeeepkseaekadledgek...eekaeeeseekpeeakaakkkaekkkekkaek 143
                  t   +e +++    g+ + ++      +++   d  ++   + p+ + +++ +      ++k ee++++ ea+k+++e+ e+    + ae +    +e ++ a+ ++e +  +++e 
  MMETSP1325-20131115|15227_1 170 TATAAEGDEDGSDAGVSTAADAH-VEAEVATPRDTNTTATATAPSVAAVPVASDassdnTKKGEEAKAELEASKKSVESKERavaAALAERKAALAKEAKALASAQSEMHDIQSKES 285
                  22222222222223444433333.122222222333344444444444444333555555566777777777777777777744422333333222222222333333333333222 PP

>> PF08432.5  Fungal protein of unknown function (DUF1742)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   8.0    0.0011       4.9      49     164 ..     216     329 ..     212     352 .. 0.66

  Alignments for each domain:
  == domain 1    score: 7.0 bits;  conditional E-value: 0.0011
    PF08432.5  49 atPivdaeaeeakkkkkelkeeiekvkkeyeekqkakkekkkkkkekdkekekkkdkkddksekekekeeeekaeelkkseeeaastldelkprkyaLhkefyqsRidrkrkaeva 164
                  a P+ ++++   +kk +e k e+e  kk +e+k++a++ + +++k + + ke k+  + +++ ++ + +e+ ++  ++++ e     l+    r++  +++ y +  +++++++ a
  MMETSP1325-20131115|15227_1 216 AVPVASDASSDNTKKGEEAKAELEASKKSVESKERAVAAALAERKAALA-KEAKALASAQSEMHDIQSKESRDIGLARTQLEILDRDLAY-LERDFRAKEAAYIAAKEKYTRRADA 329
                  56888888899999**************************999877776.6666666655555554445455555555555444444443.5555555554444444444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1286  (0.0940609); expected 273.4 (0.02)
Passed bias filter:                      369  (0.0269895); expected 273.4 (0.02)
Passed Vit filter:                        41  (0.00299883); expected 13.7 (0.001)
Passed Fwd filter:                         5  (0.000365711); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 1715.04
//
Query:       MMETSP1325-20131115|15234_1  [L=86]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       118  (0.00863078); expected 273.4 (0.02)
Passed bias filter:                      114  (0.00833821); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.38s 00:00:00.72 Elapsed: 00:00:00.51
# Mc/sec: 404.09
//
Query:       MMETSP1325-20131115|15248_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00056   19.5   5.4    0.00094   18.8   3.8    1.4  1  PF07716.10 Basic region leucine zipper
     0.0054   16.5   5.2     0.0075   16.0   3.6    1.3  1  PF00170.16 bZIP transcription factor
  ------ inclusion threshold ------
        1.5    9.3   7.0        3.4    8.1   0.1    2.1  2  PF02045.10 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B


Domain annotation for each model (and alignments):
>> PF07716.10  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   3.8   2.1e-07   0.00094       2      24 ..      26      49 ..      25      50 .. 0.88

  Alignments for each domain:
  == domain 1    score: 18.8 bits;  conditional E-value: 2.1e-07
   PF07716.10  2 ddeyrerRr.rNreAArrsRekkk 24
                 ++++r++Rr rNr  A+rsR +kk
  MMETSP1325-20131115|15248_1 26 TEQQRVERReRNRVHAKRSRIRKK 49
                 5778888888*************9 PP

>> PF00170.16  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   3.6   1.6e-06    0.0075       4      26 ..      28      50 ..      26      54 .] 0.86

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 1.6e-06
                 XCHHHHHHHHHHHHHHHHHHHHH CS
   PF00170.16  4 lkrerrkqkNReAArrsRqRKka 26
                  +r  r+++NR+ A+rsR RKk 
  MMETSP1325-20131115|15248_1 28 QQRVERRERNRVHAKRSRIRKKF 50
                 57888****************96 PP

>> PF02045.10  CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.1   0.00075       3.4      41      57 ..       6      23 ..       2      24 .. 0.86
   2 ?    3.3   2.2     0.023   1.1e+02      19      42 ..      32      54 .]      26      54 .] 0.58

  Alignments for each domain:
  == domain 1    score: 8.1 bits;  conditional E-value: 0.00075
   PF02045.10 41 eSRhkhA.lrRpRgsgGr 57
                 +S  +hA l+R Rg +G+
  MMETSP1325-20131115|15248_1  6 DSTDEHAdLKRSRGADGK 23
                 677889989********8 PP

  == domain 2    score: 3.3 bits;  conditional E-value: 0.023
   PF02045.10 19 qkRakleeekkldeksrkpylheS 42
                 ++R++   + k  ++ rk++l eS
  MMETSP1325-20131115|15248_1 32 ERRERNRVHAKR-SRIRKKFLLES 54
                 333333333344.78899999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       436  (0.03189); expected 273.4 (0.02)
Passed bias filter:                      320  (0.0234055); expected 273.4 (0.02)
Passed Vit filter:                        29  (0.00212112); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.31u 0.38s 00:00:00.69 Elapsed: 00:00:00.50
# Mc/sec: 258.81
//
Query:       MMETSP1325-20131115|15253_1  [L=74]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       117  (0.00855764); expected 273.4 (0.02)
Passed bias filter:                       92  (0.00672908); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.50
# Mc/sec: 354.66
//
Query:       MMETSP1325-20131115|15252_1  [L=129]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-05   23.5   0.0    6.5e-05   22.5   0.0    1.5  2  PF00017.19 SH2 domain


Domain annotation for each model (and alignments):
>> PF00017.19  SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   4.7e-09   6.5e-05      20      57 ..       5      49 ..       1      62 [. 0.82
   2 ?   -2.6   0.0      0.33   4.5e+03      63      74 ..      97     108 ..      75     109 .. 0.53

  Alignments for each domain:
  == domain 1    score: 22.5 bits;  conditional E-value: 4.7e-09
                 .---EEEEE-SS---EEEEEEEEET.......EEEEEEEEEETTC CS
   PF00017.19 20 kdGtFLvReSeskpGdytlsvvddg.......kvkhyriqsleng 57
                 ++GtFL R+Ses+ G++++s++d          + h++   l+n+
  MMETSP1325-20131115|15252_1  5 PQGTFLFRFSESQAGKLAISFMDYVsaaghphANAHFETAALDNN 49
                 79********************99888888777777777777665 PP

  == domain 2    score: -2.6 bits;  conditional E-value: 0.33
                  TSEEESSHHHHH CS
   PF00017.19  63 enekfsslqeLv 74 
                   ++ + +l+eLv
  MMETSP1325-20131115|15252_1  97 ISRMYGTLSELV 108
                  334466666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       349  (0.0255266); expected 273.4 (0.02)
Passed bias filter:                      291  (0.0212844); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.39s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 606.14
//
Query:       MMETSP1325-20131115|15260_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   13.4   0.9      0.076   12.8   0.0    1.7  2  PF02983.9 Alpha-lytic protease prodomain
      0.078   12.2   0.4       0.12   11.6   0.3    1.3  1  PF05387.6 Chorion family 3


Domain annotation for each model (and alignments):
>> PF02983.9  Alpha-lytic protease prodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.1e-05     0.076       9      39 ..      54      79 ..      47      80 .. 0.79
   2 ?   -2.8   0.1      0.82   5.6e+03      52      54 ..     116     118 ..     106     124 .. 0.53

  Alignments for each domain:
  == domain 1    score: 12.8 bits;  conditional E-value: 1.1e-05
    PF02983.9  9 akdaLrdaaaeaadkpvtsWyVDvrtNsVVV 39
                 +++  +     +++++++sW V++ t++V+V
  MMETSP1325-20131115|15260_1 54 THKHFN-----DHAPAAHSWRVRAATGRVKV 79
                 555553.....5899**************99 PP

  == domain 2    score: -2.8 bits;  conditional E-value: 0.82
    PF02983.9  52 ala 54 
                  +++
  MMETSP1325-20131115|15260_1 116 EAS 118
                  222 PP

>> PF05387.6  Chorion family 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   1.8e-05      0.12      22      56 ..      91     125 ..      76     132 .. 0.82

  Alignments for each domain:
  == domain 1    score: 11.6 bits;  conditional E-value: 1.8e-05
    PF05387.6  22 sagggGGkGsgdlgagasagleelvnaaaGGaass 56 
                  s g +GG G++ + +ga++gl+  v+a+   a +s
  MMETSP1325-20131115|15260_1  91 SGGDSGGRGHSGMRTGAASGLDSDVEASGAAAWQS 125
                  67889********************9987666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       170  (0.0124342); expected 273.4 (0.02)
Passed bias filter:                      134  (0.00980105); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.38s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 601.35
//
Query:       MMETSP1325-20131115|15266_1  [L=119]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       226  (0.0165301); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.37s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 633.70
//
Query:       MMETSP1325-20131115|15267_1  [L=219]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-11   44.1   0.5      3e-11   43.6   0.3    1.3  1  PF04969.11 CS domain
  ------ inclusion threshold ------
        4.1    7.0   9.1        5.7    6.5   6.3    1.1  1  PF12938.2  M domain of GW182


Domain annotation for each model (and alignments):
>> PF04969.11  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.3   4.4e-15     3e-11       3      78 .]      12      85 ..      10      85 .. 0.89

  Alignments for each domain:
  == domain 1    score: 43.6 bits;  conditional E-value: 4.4e-15
                 -EEEEETTEEEEEEE-------S-EEEEE----EEEEE---.....EEE---BSS-EEEEE..EEEEE---EEEEEEEE CS
   PF04969.11  3 ydWyQtleeVtitipvkgvikkedvkveikkkslkvsikgpge.keyllegeLfgeIdpee..sswkiedtkieitLkK 78
                 ++W+Q+ +++++ti++++v   +d k+e++k++l+++     + key  e+e++++++p++   +wk+ +++i++++ K
  MMETSP1325-20131115|15267_1 12 VKWAQRADSIYLTIDLRDV---KDEKIELTKDKLSFKGTA--SdKEYTAELEFLKPVKPDDenTKWKVLPRSIQMHIVK 85
                 79*****************...9*********88877754..559************9975338**********99988 PP

>> PF12938.2  M domain of GW182
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   6.3   0.00083       5.7      13      95 ..     111     192 ..     102     204 .. 0.65

  Alignments for each domain:
  == domain 1    score: 6.5 bits;  conditional E-value: 0.00083
    PF12938.2  13 gdrfpsggsavnslpfsqnnlnnnlgggvagggggaaggnpnlaslsslsskslgkylsgqqapp..lgsagasgvgggngvggg 95 
                  +d+++   +  ++ +f q nl++ +g g++ +g g+++g   +a+++++  +++g  ++g ++ +  + +ag +g+gg++g +gg
  MMETSP1325-20131115|15267_1 111 WDKYIDEDD--DQEAFDQSNLEGGQGFGGGMPGMGGGAGGMDMAAMQQM-MAQMGGGAGGAGGMDmaSMMAGMGGAGGPGGDMGG 192
                  666666666..788999999955555555555555558899999****9.55555555555554534445566666666666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       471  (0.03445); expected 273.4 (0.02)
Passed bias filter:                      309  (0.0226009); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         3  (0.000219427); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.39s 00:00:00.91 Elapsed: 00:00:00.63
# Mc/sec: 833.02
//
Query:       MMETSP1325-20131115|15271_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       175  (0.0127999); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         8  (0.000585138); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.38s 00:00:00.70 Elapsed: 00:00:00.62
# Mc/sec: 266.69
//
Query:       MMETSP1325-20131115|15273_1  [L=54]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-05   24.4   0.0    2.8e-05   24.3   0.0    1.1  1  PF00581.15 Rhodanese-like domain


Domain annotation for each model (and alignments):
>> PF00581.15  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   2.1e-09   2.8e-05      67     112 ..       2      44 ..       1      45 [. 0.88

  Alignments for each domain:
  == domain 1    score: 24.3 bits;  conditional E-value: 2.1e-09
   PF00581.15  67 kktvvvycssgnrsggaaalllalilkelgyknvyvLdGGfeawka 112
                  +k+vvv c+ g+rs ++++    l   e g+k+ y+++GG++a+++
  MMETSP1325-20131115|15273_1   2 NKPVVVTCKVGMRSMQLCRW---LDDPEQGFKELYNIEGGINAYSS 44 
                  89****************99...445567**************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       148  (0.010825); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.29u 0.34s 00:00:00.63 Elapsed: 00:00:00.44
# Mc/sec: 294.10
//
Query:       MMETSP1325-20131115|15270_1  [L=237]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       289  (0.0211381); expected 273.4 (0.02)
Passed bias filter:                      195  (0.0142627); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.38s 00:00:00.91 Elapsed: 00:00:00.49
# Mc/sec: 1159.05
//
Query:       MMETSP1325-20131115|15278_1  [L=96]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.12   11.8   0.0    1.0  1  PF13847.1 Methyltransferase domain


Domain annotation for each model (and alignments):
>> PF13847.1  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   8.8e-06      0.12      65     112 ..      20      67 ..      15      91 .. 0.80

  Alignments for each domain:
  == domain 1    score: 11.8 bits;  conditional E-value: 8.8e-06
    PF13847.1  65 elekl.leesfDlvisnevlnaladpqkvlkeiervlkpggrlivesps 112
                  ++++l + +  Dlv+++  l+++  + +  ++i+rv ++g+ +i e ++
  MMETSP1325-20131115|15278_1  20 KMPELsV-NERDLVVVDIHLHHIFSLVSLEQKISRVRENGTLFIYELVD 67 
                  4666544.678******************************99999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       227  (0.0166033); expected 273.4 (0.02)
Passed bias filter:                      211  (0.015433); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.51
# Mc/sec: 451.08
//
Query:       MMETSP1325-20131115|15284_1  [L=91]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       224  (0.0163839); expected 273.4 (0.02)
Passed bias filter:                      207  (0.0151404); expected 273.4 (0.02)
Passed Vit filter:                        14  (0.00102399); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.40s 00:00:00.77 Elapsed: 00:00:00.50
# Mc/sec: 436.14
//
Query:       MMETSP1325-20131115|15283_1  [L=123]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.016   13.8   3.0      0.019   13.6   2.1    1.1  1  PF11285.3  Protein of unknown function (DUF3086)
      0.043   12.8   2.4      0.049   12.6   1.6    1.1  1  PF13968.1  Domain of unknown function (DUF4220)
       0.05   13.2   1.7       0.09   12.4   1.2    1.5  1  PF06569.6  Protein of unknown function (DUF1128)
      0.054   12.8   0.5      0.073   12.4   0.4    1.2  1  PF05811.8  Eukaryotic protein of unknown function (DUF842)
      0.065   12.7   0.5      0.094   12.2   0.3    1.2  1  PF11026.3  Protein of unknown function (DUF2721)
      0.074   13.1   0.8       0.16   12.0   0.1    1.8  2  PF13982.1  YbfN-like lipoprotein
       0.13   11.7  12.4        3.3    7.1   8.6    2.0  1  PF04156.9  IncA protein
       0.18   11.5  11.4       0.26   11.0   7.9    1.3  1  PF11559.3  Afadin- and alpha -actinin-Binding
       0.21   10.0  11.6       0.27    9.7   8.0    1.1  1  PF08317.6  Spc7 kinetochore protein
       0.21   10.4   5.1       0.25   10.2   3.5    1.1  1  PF01544.13 CorA-like Mg2+ transporter protein
        0.4   10.4  11.5       0.49   10.1   8.0    1.1  1  PF09744.4  JNK_SAPK-associated protein-1
       0.62    9.9   7.0       0.79    9.5   4.9    1.1  1  PF13256.1  Domain of unknown function (DUF4047)
        0.9    9.8   4.0       0.67   10.2   1.0    2.1  1  PF04102.7  SlyX
        2.3    5.8   8.0        2.6    5.6   5.5    1.0  1  PF01496.14 V-type ATPase 116kDa subunit family
        7.9    6.7   8.0         10    6.4   5.2    1.6  1  PF06156.8  Protein of unknown function (DUF972)


Domain annotation for each model (and alignments):
>> PF11285.3  Protein of unknown function (DUF3086)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.1   2.1e-05     0.019       5      62 ..      30      89 ..      27     122 .. 0.79

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 2.1e-05
    PF11285.3  5 alkeleerrqalekeieelerrkerlekelk...tsfaGqsdelarrvkgfkdylvgalqd 62
                  +++l+e+r++++  i + e+ k +++k+l+     ++   ++lar+v++ ++y + ++q+
  MMETSP1325-20131115|15283_1 30 CIEDLREKREEVNRAILKEEEEKAKIQKDLSiltDRLSKINEALARKVQARNEYDK-TIQE 89
                 689**************************8633267899999*********99954.4444 PP

>> PF13968.1  Domain of unknown function (DUF4220)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.6   5.4e-05     0.049     127     207 ..      39     121 ..      12     123 .] 0.61

  Alignments for each domain:
  == domain 1    score: 12.6 bits;  conditional E-value: 5.4e-05
    PF13968.1 127 esnyakfleeykyrkaeglqaklvelkeeea...eeknkelkvt...elllesrekegdeekdlclahalfkllkrlfvdlilseee 207
                  e+ ++ +l+e ++  ++++q+ l +l  + +   e    ++  +   e +++++e+e+ ++k+l ++  l+++lkr  v+l+ ++++
  MMETSP1325-20131115|15283_1  39 EEVNRAILKEEEE--KAKIQKDLSILTDRLSkinEALARKV--QarnEYDKTIQETEAAYMKILESSQTLLHVLKRETVNLTKKKQS 121
                  3333445555533..33333333322222111122222222..24468899999***************************998775 PP

>> PF06569.6  Protein of unknown function (DUF1128)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.2   9.8e-05      0.09       6      44 ..      24      62 ..      20      82 .. 0.86

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 9.8e-05
    PF06569.6  6 eenveymieeikekLnvvNvgvlkpekfkeekyedLkei 44
                 ++++ + ie+++ek   vN+++lk e+ k + ++dL+ +
  MMETSP1325-20131115|15283_1 24 NNELVKCIEDLREKREEVNRAILKEEEEKAKIQKDLSIL 62
                 455999************************999999866 PP

>> PF05811.8  Eukaryotic protein of unknown function (DUF842)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.4     8e-05     0.073      35      98 ..      28      87 ..      16     114 .. 0.69

  Alignments for each domain:
  == domain 1    score: 12.4 bits;  conditional E-value: 8e-05
    PF05811.8 35 aeCfedkkasleevenCverCsvplakaqqlveselekfqdrLqrclmeCqdklkdklasnkne 98
                 ++C+ed +++ eev++ + +     ++ +  ++++l+ + drL++     + k++++ + +k+ 
  MMETSP1325-20131115|15283_1 28 VKCIEDLREKREEVNRAILK----EEEEKAKIQKDLSILTDRLSKINEALARKVQARNEYDKTI 87
                 79*************99965....4455566778888888888887777777766665444332 PP

>> PF11026.3  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3    0.0001     0.094      10      67 ..      14      74 ..      12      80 .. 0.79

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 0.0001
    PF11026.3 10 saigllllvltnRlariadrirqleerlee..kedeelrke.kaelknlrrRlrlirrail 67
                 +a g+ l  ++n l+++++ +r+ +e+++    ++ee++++ ++ l +l+ Rl+ i+ a++
  MMETSP1325-20131115|15283_1 14 AAQGATLQNYNNELVKCIEDLREKREEVNRaiLKEEEEKAKiQKDLSILTDRLSKINEALA 74
                 688999*****************9988555333344443337****************987 PP

>> PF13982.1  YbfN-like lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.8   1.6e+03      17      29 ..      29      41 ..      14      62 .. 0.64
   2 ?   12.0   0.1   0.00017      0.16       8      43 ..      76     112 ..      69     122 .. 0.82

  Alignments for each domain:
  == domain 1    score: -0.8 bits;  conditional E-value: 1.8
    PF13982.1 17 acintaeGspekl 29
                 +ci++   + e +
  MMETSP1325-20131115|15283_1 29 KCIEDLREKREEV 41
                 5666555555544 PP

  == domain 2    score: 12.0 bits;  conditional E-value: 0.00017
    PF13982.1   8 dsklkqaysacintaeGspekl.eacqavlnvlkkek 43 
                    + ++ y + i+++e    k+ e+ q++l+vlk+e 
  MMETSP1325-20131115|15283_1  76 KVQARNEYDKTIQETEAAYMKIlESSQTLLHVLKRET 112
                  5677899**********998864899********996 PP

>> PF04156.9  IncA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   8.6    0.0036       3.3      78     163 ..      33     115 ..      12     123 .] 0.55

  Alignments for each domain:
  == domain 1    score: 7.1 bits;  conditional E-value: 0.0036
    PF04156.9  78 rlqeelsesesqlseleeeleqleerlaeleseledleedlellqeelksleerlesleesikelakeirelreeisdlkeevqel 163
                  +l e+  e ++ + + eee  ++++ l+ l+++l++++e+l  + ++++++ + +++ e ++ ++ ++ + l+     lk+e  +l
  MMETSP1325-20131115|15283_1  33 DLREKREEVNRAILKEEEEKAKIQKDLSILTDRLSKINEALARKVQARNEYDKTIQETEAAYMKILESSQTLL---HVLKRETVNL 115
                  3333444444444444555666666666666666666666666666666666666666666666666666666...4444444444 PP

>> PF11559.3  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   7.9   0.00029      0.26      38     118 ..      22     102 ..      13     122 .. 0.87

  Alignments for each domain:
  == domain 1    score: 11.0 bits;  conditional E-value: 0.00029
    PF11559.3  38 nviysLlqqrdrdleqresleetlrkleaeierlqskierlktqleqlerelallqekerqlekklktleqklknekeelq 118
                  n  ++L++  +  +e re++++ ++k e e+++ q++++ l+++l++    la   ++ ++  k ++++e++ ++  e+ q
  MMETSP1325-20131115|15283_1  22 NYNNELVKCIEDLREKREEVNRAILKEEEEKAKIQKDLSILTDRLSKINEALARKVQARNEYDKTIQETEAAYMKILESSQ 102
                  5558999999999****************************************8888889999999999988877666655 PP

>> PF08317.6  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   8.0   0.00029      0.27     182     262 ..      20     103 ..      15     120 .. 0.85

  Alignments for each domain:
  == domain 1    score: 9.7 bits;  conditional E-value: 0.00029
    PF08317.6 182 lrekkealkeelasLrqlkde...leecdseeleklreeLssleekieekrkkleeleeelqelkkkiealkekkselleeiae 262
                  l++++++l + +++Lr+ ++e   +   ++ee +k++++Ls l++ +++ ++ l+ + + ++e +k+i++++    ++le+ + 
  MMETSP1325-20131115|15283_1  20 LQNYNNELVKCIEDLREKREEvnrAILKEEEEKAKIQKDLSILTDRLSKINEALARKVQARNEYDKTIQETEAAYMKILESSQT 103
                  789999************999554445688889999**********************************99988888776655 PP

>> PF01544.13  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.5   0.00027      0.25     116     188 ..      20      89 ..      18     118 .. 0.80

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00027
   PF01544.13 116 ldeivdryfeilekleeeldeledel..edetkkellreilqlrrelvrlrrallplrdvlkrllrrkdkkllte 188
                  l+  ++++ + +e+l+e+++e+ +++  e+e+k ++ ++++ l  +l+++  al+ + ++ ++      +k++ e
  MMETSP1325-20131115|15283_1  20 LQNYNNELVKCIEDLREKREEVNRAIlkEEEEKAKIQKDLSILTDRLSKINEALARKVQARNE-----YDKTIQE 89 
                  778899999*********************************************996665532.....2333333 PP

>> PF09744.4  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   8.0   0.00054      0.49      55     148 ..      20     109 ..      14     121 .. 0.86

  Alignments for each domain:
  == domain 1    score: 10.1 bits;  conditional E-value: 0.00054
    PF09744.4  55 leedkerLskqyerekelrkqaeekllelEdeleqekkelekkieeleeevrqlelkaknlsdkvsrLeeretelkkeyeslheretkllkeyv 148
                  l++ +++L+k  e  +e+r++ ++ +l+ E+e  + +k+l+   ++l + +  l  k++  ++ +  ++e e      y ++ e  + ll+ ++
  MMETSP1325-20131115|15283_1  20 LQNYNNELVKCIEDLREKREEVNRAILKEEEEKAKIQKDLSILTDRLSKINEALARKVQARNEYDKTIQETEAA----YMKILESSQTLLHVLK 109
                  778899**************************************************************999998....6666666666666654 PP

>> PF13256.1  Domain of unknown function (DUF4047)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.9   0.00086      0.79      27     102 ..      29     102 ..      25     119 .. 0.87

  Alignments for each domain:
  == domain 1    score: 9.5 bits;  conditional E-value: 0.00086
    PF13256.1  27 ktidtLkkeakqhekvilkeyeemkkevkadsvevleqklkeWkeqrekvavereaLqkiyteiedyykkvkeelk 102
                  k i++L+++ +  +++ilke+ee k ++++d + +l ++l++ +e + + +  r+   k  +e e+ y k+ e+ +
  MMETSP1325-20131115|15283_1  29 KCIEDLREKREEVNRAILKEEEE-KAKIQKD-LSILTDRLSKINEALARKVQARNEYDKTIQETEAAYMKILESSQ 102
                  89*****************9876.7888877.668***********998888888899999**********99875 PP

>> PF04102.7  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.0   0.00073      0.67      21      63 ..      39      81 ..      36      85 .. 0.88

  Alignments for each domain:
  == domain 1    score: 10.2 bits;  conditional E-value: 0.00073
    PF04102.7 21 eeLNevvaeqqkeidrlqrqlrllaerlkeleessneaseaee 63
                 ee N+++ + ++e +++q+ l+ l++rl +++e    + +a++
  MMETSP1325-20131115|15283_1 39 EEVNRAILKEEEEKAKIQKDLSILTDRLSKINEALARKVQARN 81
                 799****************************987766666665 PP

>> PF01496.14  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   5.5    0.0028       2.6      12     105 ..      31     120 ..      23     123 .] 0.75

  Alignments for each domain:
  == domain 1    score: 5.6 bits;  conditional E-value: 0.0028
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   PF01496.14  12 frDlnedvsafqrkfvnevrrldeverklrkleseikkakielkdekekpdvpeskevedleeeleeleeelkeveeslesLekelneleelrn 105
                  ++Dl e+ ++ +r +++e  + ++ ++ l+ l + ++k++ +l ++ + ++       ++++e+   + + l++ ++ l  L++e+ +l+++++
  MMETSP1325-20131115|15283_1  31 IEDLREKREEVNRAILKEEEEKAKIQKDLSILTDRLSKINEALARKVQARNE----YDKTIQETEAAYMKILESSQTLLHVLKRETVNLTKKKQ 120
                  8999999999****************************99999932222222....22345666666666777777777777777777777665 PP

>> PF06156.8  Protein of unknown function (DUF972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.2     0.011        10      11      75 ..      25      91 ..      13     111 .. 0.66

  Alignments for each domain:
  == domain 1    score: 6.4 bits;  conditional E-value: 0.011
    PF06156.8 11 seleeqleelleeleelkkelkelleenaelkleneklrerleelee............eekkkekkkkkkklgegk 75
                 +el + +e+l e+ ee+ + + +  ee a+++ + + l +rl++++e            +          k+++e +
  MMETSP1325-20131115|15283_1 25 NELVKCIEDLREKREEVNRAILKEEEEKAKIQKDLSILTDRLSKINEalarkvqarneyD----------KTIQETE 91
                 566677888888888888888899999999999999999999999987755443333222..........2222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                      1839  (0.134508); expected 273.4 (0.02)
Passed bias filter:                      815  (0.0596109); expected 273.4 (0.02)
Passed Vit filter:                       119  (0.00870392); expected 13.7 (0.001)
Passed Fwd filter:                        15  (0.00109713); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.56u 0.41s 00:00:00.97 Elapsed: 00:00:00.57
# Mc/sec: 508.19
//
Query:       MMETSP1325-20131115|15291_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       130  (0.00950848); expected 273.4 (0.02)
Passed bias filter:                      119  (0.00870392); expected 273.4 (0.02)
Passed Vit filter:                         6  (0.000438853); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.38s 00:00:00.67 Elapsed: 00:00:00.54
# Mc/sec: 306.20
//
Query:       MMETSP1325-20131115|15292_1  [L=118]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00039   20.0   0.3    0.00061   19.4   0.2    1.3  1  PF00627.26 UBA/TS-N domain


Domain annotation for each model (and alignments):
>> PF00627.26  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.2   4.5e-08   0.00061       6      31 ..      54      79 ..      54      80 .. 0.93

  Alignments for each domain:
  == domain 1    score: 19.4 bits;  conditional E-value: 4.5e-08
                 HHHHHH----HHHHHHHHHHTTTSHH CS
   PF00627.26  6 iqqLreMGfsreeakkALratnnnvE 31
                 + +L+ MGf+ eea  AL+a+n++v+
  MMETSP1325-20131115|15292_1 54 VNSLVMMGFGAEEAAVALEASNGDVD 79
                 5689********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       168  (0.0122879); expected 273.4 (0.02)
Passed bias filter:                      145  (0.0106056); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.33s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 601.64
//
Query:       MMETSP1325-20131115|15295_1  [L=111]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       299  (0.0218695); expected 273.4 (0.02)
Passed bias filter:                      275  (0.0201141); expected 273.4 (0.02)
Passed Vit filter:                        15  (0.00109713); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.35s 00:00:00.73 Elapsed: 00:00:00.50
# Mc/sec: 531.99
//
Query:       MMETSP1325-20131115|15299_1  [L=39]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (39 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       147  (0.0107519); expected 273.4 (0.02)
Passed bias filter:                      140  (0.0102399); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.36s 00:00:00.65 Elapsed: 00:00:00.48
# Mc/sec: 194.70
//
Query:       MMETSP1325-20131115|15300_1  [L=55]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   22.1   0.8    0.00018   21.6   0.5    1.3  1  PF08246.7  Cathepsin propeptide inhibitor domain (I29)
  ------ inclusion threshold ------
      0.064   13.2   0.2       0.07   13.0   0.1    1.0  1  PF03732.12 Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> PF08246.7  Cathepsin propeptide inhibitor domain (I29)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.5   2.6e-08   0.00018       1      25 [.      30      54 ..      30      55 .] 0.97

  Alignments for each domain:
  == domain 1    score: 21.6 bits;  conditional E-value: 2.6e-08
    PF08246.7  1 FeswmdaygkkYrhsseinerfenF 25
                 ++s++++y k+Y++ +e+nerf +F
  MMETSP1325-20131115|15300_1 30 WDSFKAEYRKQYSTMAEENERFGIF 54
                 89**********************9 PP

>> PF03732.12  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1     1e-05      0.07       3      46 ..       7      47 ..       5      51 .. 0.85

  Alignments for each domain:
  == domain 1    score: 13.0 bits;  conditional E-value: 1e-05
   PF03732.12  3 astsLegrAkswlkslvarsidasesWkdlkkafrktflpserk 46
                 a  +L+g+ ++ +++    + +    W+ +k ++rk++   +++
  MMETSP1325-20131115|15300_1  7 ALAALSGANATLFSNETHHQKT---MWDSFKAEYRKQYSTMAEE 47
                 5668999999***999999999...9************985555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       530  (0.0387654); expected 273.4 (0.02)
Passed bias filter:                      468  (0.0342305); expected 273.4 (0.02)
Passed Vit filter:                        40  (0.00292569); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.40s 00:00:00.75 Elapsed: 00:00:00.50
# Mc/sec: 263.60
//
Query:       MMETSP1325-20131115|15304_1  [L=47]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (47 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       161  (0.0117759); expected 273.4 (0.02)
Passed bias filter:                      160  (0.0117028); expected 273.4 (0.02)
Passed Vit filter:                         2  (0.000146284); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.31u 0.36s 00:00:00.67 Elapsed: 00:00:00.52
# Mc/sec: 216.59
//
Query:       MMETSP1325-20131115|15298_1  [L=170]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       215  (0.0157256); expected 273.4 (0.02)
Passed bias filter:                      208  (0.0152136); expected 273.4 (0.02)
Passed Vit filter:                        11  (0.000804564); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.37s 00:00:00.79 Elapsed: 00:00:00.56
# Mc/sec: 727.47
//
Query:       MMETSP1325-20131115|15314_1  [L=76]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.7    9.0   4.1       0.77    8.8   2.9    1.0  1  PF07174.6 Fibronectin-attachment protein (FAP)


Domain annotation for each model (and alignments):
>> PF07174.6  Fibronectin-attachment protein (FAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.9   5.7e-05      0.77      41      98 ..       2      63 ..       1      71 [. 0.70

  Alignments for each domain:
  == domain 1    score: 8.8 bits;  conditional E-value: 5.7e-05
    PF07174.6 41 PePaPs..apPstaaaaPapaapvaepapaaapap..apadpnaaaPpapadPnapvPppvd 98
                 P+PaP+  + P+++ ++P++++ +  p    + ++     d+ ++aP   + Pn+++P +++
  MMETSP1325-20131115|15314_1  2 PAPAPAssSLPPSSFGPPSSSSHDLLPEHERHHPAyiGMEDAATSAPWLHLGPNSTYPVVAE 63
                 55555544889999999999888766665554444334556666677799********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       145  (0.0106056); expected 273.4 (0.02)
Passed bias filter:                      121  (0.0088502); expected 273.4 (0.02)
Passed Vit filter:                         7  (0.000511995); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.38s 00:00:00.71 Elapsed: 00:00:00.54
# Mc/sec: 337.27
//
Query:       MMETSP1325-20131115|15315_1  [L=149]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       186  (0.0136044); expected 273.4 (0.02)
Passed bias filter:                      143  (0.0104593); expected 273.4 (0.02)
Passed Vit filter:                         3  (0.000219427); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.34s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 759.70
//
Query:       MMETSP1325-20131115|15319_1  [L=69]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       209  (0.0152867); expected 273.4 (0.02)
Passed bias filter:                      190  (0.013897); expected 273.4 (0.02)
Passed Vit filter:                        12  (0.000877706); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.40s 00:00:00.73 Elapsed: 00:00:00.52
# Mc/sec: 317.98
//
Query:       MMETSP1325-20131115|15324_1  [L=157]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-20   70.2   0.0    1.3e-19   69.8   0.0    1.2  1  PF00462.19 Glutaredoxin
     0.0075   16.3   0.0      0.011   15.7   0.0    1.3  1  PF13417.1  Glutathione S-transferase, N-terminal domain
  ------ inclusion threshold ------
      0.026   14.6   0.0       0.04   14.0   0.0    1.4  1  PF05768.9  Glutaredoxin-like domain (DUF836)
      0.031   14.3   0.3      0.047   13.7   0.2    1.5  1  PF13098.1  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> PF00462.19  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.8   0.0   3.7e-23   1.3e-19       1      60 []      70     132 ..      70     132 .. 0.97

  Alignments for each domain:
  == domain 1    score: 69.8 bits;  conditional E-value: 3.7e-23
                  EEEEE-STSHHHHHHHHHHHHTTHHEEEEETTTCH...HHHHHHHHHHSSBSSSEEEETTEEE CS
   PF00462.19   1 vvvftkptCpyCkkakrlLdelgvkyeeidvdedp...eireelkelsgwrtvPqvfidgehi 60 
                  v+vf+k+tCp+Ckk+k lLd lg++y  i+++e +   +i+ el+  +g+rtvP+vf++g+h+
  MMETSP1325-20131115|15324_1  70 VMVFSKSTCPFCKKTKTLLDGLGIDYGLIELNERDdgpDIQLELAMSTGQRTVPNVFVKGHHV 132
                  89*******************************97788************************8 PP

>> PF13417.1  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.3e-06     0.011       2      48 ..      73     123 ..      72     135 .. 0.79

  Alignments for each domain:
  == domain 1    score: 15.7 bits;  conditional E-value: 3.3e-06
                  E--TTSHHHHHHHHHHHH----EEE----TTTT....HHHHHHH-TT--SS CS
    PF13417.1   2 ygspfSpyarkvrlaLeekglpyelvevtpgkk....rpellalnpkgkvP 48 
                  ++ +++p++ k   +L  +g++y l+e++  ++      el+  +++++vP
  MMETSP1325-20131115|15324_1  73 FSKSTCPFCKKTKTLLDGLGIDYGLIELNERDDgpdiQLELAMSTGQRTVP 123
                  6789************************98877443344555556999999 PP

>> PF05768.9  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.2e-05      0.04       2      35 ..      70     104 ..      69     140 .. 0.84

  Alignments for each domain:
  == domain 1    score: 14.0 bits;  conditional E-value: 1.2e-05
                  EEEEE-SSSCHHHHHHHHCCC..CT--.SEEEEEE CS
    PF05768.9   2 ltLyskpgChLCeqakelLkelkleeg.lelevid 35 
                  ++ +sk +C+ C++ k+lL  l+++ g +el ++d
  MMETSP1325-20131115|15324_1  70 VMVFSKSTCPFCKKTKTLLDGLGIDYGlIELNERD 104
                  578*****************999998877777776 PP

>> PF13098.1  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.2   1.4e-05     0.047       9      27 ..      70      88 ..      62     134 .. 0.90

  Alignments for each domain:
  == domain 1    score: 13.7 bits;  conditional E-value: 1.4e-05
    PF13098.1  9 ivvftdpdCpyCkklhkel 27
                 ++vf+  +Cp+Ckk +  l
  MMETSP1325-20131115|15324_1 70 VMVFSKSTCPFCKKTKTLL 88
                 89************97655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       452  (0.0330603); expected 273.4 (0.02)
Passed bias filter:                      420  (0.0307197); expected 273.4 (0.02)
Passed Vit filter:                        55  (0.00402282); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.35s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 752.46
//
Query:       MMETSP1325-20131115|15337_1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0015   18.1   1.3     0.0065   16.0   0.8    2.2  1  PF01641.13 SelR domain


Domain annotation for each model (and alignments):
>> PF01641.13  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.8   4.7e-07    0.0065      57     119 ..     106     157 ..      40     161 .. 0.68

  Alignments for each domain:
  == domain 1    score: 16.0 bits;  conditional E-value: 4.7e-07
                  -----EES--.STTTSEEEEEEE----EEEEEEETTC-TT---EE-------.--EEE--TTTE CS
   PF01641.13  57 gcGWPsFsep.iseeaikekedeslgmkRvevrcakcdahLGhvfkdGpkektgeRyCinsasl 119
                    GWPsF ++ ++ e ++   ++       e  +   ++hLGh + d    ++g+RyCin +s+
  MMETSP1325-20131115|15337_1 106 AHGWPSFRDEeVNWEFVRCL-ENG------ECVS-VDGTHLGHNLPD----RSGNRYCINLVSV 157
                  35999998761444444443.333......3333.3457****8765....679******9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       315  (0.0230398); expected 273.4 (0.02)
Passed bias filter:                      293  (0.0214307); expected 273.4 (0.02)
Passed Vit filter:                        22  (0.00160913); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.35s 00:00:00.80 Elapsed: 00:00:00.51
# Mc/sec: 761.20
//
Query:       MMETSP1325-20131115|15345_1  [L=84]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   14.0   0.2      0.033   13.6   0.1    1.2  1  PF07219.8 HemY protein N-terminus
      0.092   12.2   0.1      0.092   12.2   0.1    1.1  1  PF02508.9 Rnf-Nqr subunit, membrane protein


Domain annotation for each model (and alignments):
>> PF07219.8  HemY protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   4.8e-06     0.033      17      55 ..      40      76 ..      33      83 .. 0.64

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 4.8e-06
    PF07219.8 17 lqavillllllavlvllewllrliirlpsrvrryfrrrk 55
                 l+ ++l++l ++    + wl++++++ p+ +++   + k
  MMETSP1325-20131115|15345_1 40 LAIAVLIVLHFV--AFVYWLVHFFTDKPTPAWAFAATIK 76
                 222333333333..349***********99987766555 PP

>> PF02508.9  Rnf-Nqr subunit, membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.3e-05     0.092      27      63 ..      26      62 ..       4      77 .. 0.78

  Alignments for each domain:
  == domain 1    score: 12.2 bits;  conditional E-value: 1.3e-05
    PF02508.9 27 pfLavskkvetalglGlAvtfVlvlsnllvsllrnli 63
                 ++++   k+ ++l l++Av++Vl + +++ +l++ + 
  MMETSP1325-20131115|15345_1 26 TVFGPLAKLPNSLLLAIAVLIVLHFVAFVYWLVHFFT 62
                 6666678999**********************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       606  (0.0443242); expected 273.4 (0.02)
Passed bias filter:                      451  (0.0329871); expected 273.4 (0.02)
Passed Vit filter:                        62  (0.00453482); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.42s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 428.29
//
Query:       MMETSP1325-20131115|15331_1  [L=510]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-08   33.4  17.1    2.6e-08   33.4  11.9    2.4  2  PF13923.1  Zinc finger, C3HC4 type (RING finger)
    1.6e-07   30.7  17.0    1.6e-07   30.7  11.8    2.5  2  PF13920.1  Zinc finger, C3HC4 type (RING finger)
    5.3e-07   29.1  18.1    5.3e-07   29.1  12.5    2.5  2  PF13639.1  Ring finger domain
    9.8e-05   21.8  18.9    9.8e-05   21.8  13.1    2.4  2  PF00097.20 Zinc finger, C3HC4 type (RING finger)
    0.00033   20.4   0.0    0.00069   19.3   0.0    1.4  1  PF04564.10 U-box domain
    0.00099   18.5   8.0     0.0019   17.6   5.6    1.4  1  PF13445.1  RING-type zinc-finger, LisH dimerisation motif


Domain annotation for each model (and alignments):
>> PF13923.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4  11.9   1.1e-11   2.6e-08       3      46 .]      40      81 ..      38      81 .. 0.93
   2 ?   -1.7   4.4         1   2.3e+03      20      36 ..     436     452 ..     428     460 .. 0.79

  Alignments for each domain:
  == domain 1    score: 33.4 bits;  conditional E-value: 1.1e-11
    PF13923.1  3 fsCpiCleelenpviltpCgHlyCkkCieqwlekskkkCPiCrn 46
                   C++C e  +++vi tpCgH yC++Ci+++l+  k +CP+C +
  MMETSP1325-20131115|15331_1 40 MQCVVCVEPCREAVI-TPCGHTYCRQCITECLNL-KHSCPTCSQ 81
                 58***********76.******************.*******75 PP

  == domain 2    score: -1.7 bits;  conditional E-value: 1
    PF13923.1  20 pCgHlyCkkCieqwlek 36 
                  +C  + Ck+C+ +w+  
  MMETSP1325-20131115|15331_1 436 KCDYYQCKTCAIKWICG 452
                  588889****9999755 PP

>> PF13920.1  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7  11.8     7e-11   1.6e-07       3      48 ..      40      84 ..      38      85 .. 0.96
   2 ?   -3.5   4.8       3.4   7.8e+03      20      40 ..     437     454 ..     433     463 .. 0.64

  Alignments for each domain:
  == domain 1    score: 30.7 bits;  conditional E-value: 7e-11
    PF13920.1  3 ktCvvClereadvlllpCgHlclCeeCaerllkrkkkCpiCrspie 48
                  +CvvC e  ++++++pCgH   C +C +++l+ k++Cp+C +p++
  MMETSP1325-20131115|15331_1 40 MQCVVCVEPCREAVITPCGHT-YCRQCITECLNLKHSCPTCSQPVT 84
                 58*******************.**********************96 PP

  == domain 2    score: -3.5 bits;  conditional E-value: 3.4
    PF13920.1  20 CgHlclCeeCaerllkrkkkC 40 
                  C +   C++Ca ++++   +C
  MMETSP1325-20131115|15331_1 437 CDYY-QCKTCAIKWIC--GRC 454
                  6666.78888887743..333 PP

>> PF13639.1  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1  12.5   2.3e-10   5.3e-07       2      46 .]      41      82 ..      40      82 .. 0.96
   2 ?    0.4   2.7      0.21   4.9e+02      20      37 ..     436     453 ..     426     465 .. 0.81

  Alignments for each domain:
  == domain 1    score: 29.1 bits;  conditional E-value: 2.3e-10
    PF13639.1  2 eCaiCldelsegeevvrlpCgHvfHeeCldewlrssnsCPlCrkp 46
                 +C++C +++   +e+v +pCgH+++++C+ e l+ ++sCP+C +p
  MMETSP1325-20131115|15331_1 41 QCVVCVEPC---REAVITPCGHTYCRQCITECLNLKHSCPTCSQP 82
                 8********...79****************************986 PP

  == domain 2    score: 0.4 bits;  conditional E-value: 0.21
    PF13639.1  20 pCgHvfHeeCldewlrss 37 
                  +C  + +++C  +w+  +
  MMETSP1325-20131115|15331_1 436 KCDYYQCKTCAIKWICGR 453
                  49999*********9532 PP

>> PF00097.20  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8  13.1   4.3e-08   9.8e-05       1      41 []      42      79 ..      42      79 .. 0.97
   2 ?   -2.5   4.6       1.7   3.8e+03      15      38 ..     435     458 ..     420     460 .. 0.78

  Alignments for each domain:
  == domain 1    score: 21.8 bits;  conditional E-value: 4.3e-08
                 -TTTSSS-SSEE.BSCTS-EE-CHHHHHHHCST-----TTT CS
   PF00097.20  1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41
                 C +C e   e++ +++C+H++C++Ci+++l+   k +CP+C
  MMETSP1325-20131115|15331_1 42 CVVCVEPCREAV-ITPCGHTYCRQCITECLN--LKHSCPTC 79
                 99**********.******************..8888**** PP

  == domain 2    score: -2.5 bits;  conditional E-value: 1.7
                  SCTS-EE-CHHHHHHHCST----- CS
   PF00097.20  15 leCkHsfCskCirkilksrkkvkC 38 
                   +C+   C++C  k++  r + +C
  MMETSP1325-20131115|15331_1 435 QKCDYYQCKTCAIKWICGRCASSC 458
                  6899999********987666667 PP

>> PF04564.10  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0     3e-07   0.00069      16      63 ..      51      97 ..      40     104 .. 0.89

  Alignments for each domain:
  == domain 1    score: 19.3 bits;  conditional E-value: 3e-07
                 SEEE-TTT-EEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHH CS
   PF04564.10 16 dPvilPsgitvDrstiekhllsrdktdPftreplteeelipnlelKek 63
                 + vi+P g+t+ r+ i+++l+  ++++P   +p+t ++l+ n ++  +
  MMETSP1325-20131115|15331_1 51 EAVITPCGHTYCRQCITECLNL-KHSCPTCSQPVTVDQLVRNHAVDGA 97
                 569******************9.*******************987655 PP

>> PF13445.1  RING-type zinc-finger, LisH dimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   5.6   8.2e-07    0.0019       4      57 ..      33      77 ..      30      80 .. 0.82

  Alignments for each domain:
  == domain 1    score: 17.6 bits;  conditional E-value: 8.2e-07
                 XXXXXXX-B-TTT-S.-SS....EEEES---EEEHHHHHHHHHHHHTTT--B--- CS
    PF13445.1  4 aahfhsifaCpiske.qsteqnpPvvLpCGhvisrealeklakggrsnkgrfkCP 57
                 a++     +C ++ e   +     v+ pCGh+++r++++++++       +  CP
  MMETSP1325-20131115|15331_1 33 ANRVVQAMQCVVCVEpCRE----AVITPCGHTYCRQCITECLN--L----KHSCP 77
                 556677889******8866....*****************998..2....44555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       598  (0.043739); expected 273.4 (0.02)
Passed bias filter:                      260  (0.019017); expected 273.4 (0.02)
Passed Vit filter:                        30  (0.00219427); expected 13.7 (0.001)
Passed Fwd filter:                        11  (0.000804564); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.82u 0.34s 00:00:01.15 Elapsed: 00:00:00.72
# Mc/sec: 1697.42
//
Query:       MMETSP1325-20131115|15354_1  [L=228]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-26   91.1   0.0    3.8e-26   90.4   0.0    1.3  1  PF05180.7 DNL zinc finger
  ------ inclusion threshold ------
      0.039   13.5   0.6       0.46   10.1   0.0    2.5  2  PF13717.1 zinc-ribbon domain
      0.044   13.3   0.1      0.044   13.3   0.1    1.5  2  PF05129.8 Transcription elongation factor Elf1 like
       0.36   10.3   0.0       0.36   10.3   0.0    2.5  3  PF13719.1 zinc-ribbon domain


Domain annotation for each model (and alignments):
>> PF05180.7  DNL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   1.1e-29   3.8e-26       2      65 ..     154     217 ..     153     218 .. 0.96

  Alignments for each domain:
  == domain 1    score: 90.4 bits;  conditional E-value: 1.1e-29
    PF05180.7   2 qltftCkkCgtrskkkiskqaYekGvVlvqCpgCknrHliaDnLglfkdekeniedilaekgek 65 
                   l+ftC +C+trs+++is+++Ye+GvV+++Cp+C++ HliaD+Lg+f+de++ ie+ +aekg +
  MMETSP1325-20131115|15354_1 154 ALVFTCSVCDTRSARRISQNSYENGVVIIRCPSCQSLHLIADRLGYFEDESWDIEKAIAEKGGT 217
                  689*********************************************************9975 PP

>> PF13717.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.13   4.3e+02      27      33 ..     158     164 ..     152     166 .. 0.76
   2 ?   10.1   0.0   0.00013      0.46       2      17 ..     181     196 ..     181     197 .. 0.86

  Alignments for each domain:
  == domain 1    score: 0.5 bits;  conditional E-value: 0.13
    PF13717.1  27 rCskCgh 33 
                  +Cs C +
  MMETSP1325-20131115|15354_1 158 TCSVCDT 164
                  7888865 PP

  == domain 2    score: 10.1 bits;  conditional E-value: 0.00013
    PF13717.1   2 kIeCpnCkakyeidde 17 
                  +I+Cp+C+    i+d+
  MMETSP1325-20131115|15354_1 181 IIRCPSCQSLHLIADR 196
                  79******99888886 PP

>> PF05129.8  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1         2   6.9e+03      44      53 ..      49      58 ..      46      67 .. 0.71
   2 ?   13.3   0.1   1.3e-05     0.044      15      54 ..     149     189 ..     137     194 .. 0.81

  Alignments for each domain:
  == domain 1    score: -3.3 bits;  conditional E-value: 2
                 E-EEEESSS- CS
    PF05129.8 44 iaklkCkvCg 53
                 +a   C+ C 
  MMETSP1325-20131115|15354_1 49 RAGCGCGRCA 58
                 5566788885 PP

  == domain 2    score: 13.3 bits;  conditional E-value: 1.3e-05
                  -----SS----TTT--SS-EEEEEETT.TTE-EEEESSS-- CS
    PF05129.8  15 kkeklpkvFeCpfCnhkksvsvkldkk.tkiaklkCkvCgl 54 
                    +kl  vF+C +C++ ++  ++ +   +++  ++C +C+ 
  MMETSP1325-20131115|15354_1 149 PGKKLALVFTCSVCDTRSARRISQNSYeNGVVIIRCPSCQS 189
                  5678999********999999987543389999******85 PP

>> PF13719.1  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.6       3.7   1.3e+04      28      31 ..      54      57 ..      54      58 .. 0.79
   2 ?    0.5   0.0      0.12   4.2e+02      27      33 ..     158     164 ..     152     166 .. 0.75
   3 ?   10.3   0.0   0.00011      0.36       2      17 ..     181     196 ..     180     197 .. 0.86

  Alignments for each domain:
  == domain 1    score: -4.3 bits;  conditional E-value: 3.7
    PF13719.1 28 CskC 31
                 C++C
  MMETSP1325-20131115|15354_1 54 CGRC 57
                 8888 PP

  == domain 2    score: 0.5 bits;  conditional E-value: 0.12
    PF13719.1  27 rCskCgh 33 
                  +Cs C +
  MMETSP1325-20131115|15354_1 158 TCSVCDT 164
                  6888865 PP

  == domain 3    score: 10.3 bits;  conditional E-value: 0.00011
    PF13719.1   2 iIeCpnCkakyeidde 17 
                  iI+Cp+C++   i+d+
  MMETSP1325-20131115|15354_1 181 IIRCPSCQSLHLIADR 196
                  7*******98888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       397  (0.0290374); expected 273.4 (0.02)
Passed bias filter:                      290  (0.0212112); expected 273.4 (0.02)
Passed Vit filter:                        35  (0.00255998); expected 13.7 (0.001)
Passed Fwd filter:                         4  (0.000292569); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.36s 00:00:00.84 Elapsed: 00:00:00.68
# Mc/sec: 803.48
//
Query:       MMETSP1325-20131115|15334_1  [L=498]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       331  (0.0242101); expected 273.4 (0.02)
Passed bias filter:                      227  (0.0166033); expected 273.4 (0.02)
Passed Vit filter:                        21  (0.00153599); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.47s 00:00:01.12 Elapsed: 00:00:00.49
# Mc/sec: 2435.48
//
Query:       MMETSP1325-20131115|15357_1  [L=341]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       341  (0.0249415); expected 273.4 (0.02)
Passed bias filter:                      244  (0.0178467); expected 273.4 (0.02)
Passed Vit filter:                        18  (0.00131656); expected 13.7 (0.001)
Passed Fwd filter:                         1  (7.31422e-05); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.47s 00:00:01.03 Elapsed: 00:00:00.57
# Mc/sec: 1408.89
//
Query:       MMETSP1325-20131115|15359_1  [L=58]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       202  (0.0147747); expected 273.4 (0.02)
Passed bias filter:                      182  (0.0133119); expected 273.4 (0.02)
Passed Vit filter:                        10  (0.000731422); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.30u 0.38s 00:00:00.68 Elapsed: 00:00:00.50
# Mc/sec: 277.98
//
Query:       MMETSP1325-20131115|15332_1  [L=479]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-31  107.9   0.0    7.3e-31  107.1   0.0    1.3  1  PF00069.20 Protein kinase domain
    2.7e-20   72.4   0.0    3.5e-15   55.6   0.0    2.1  2  PF07714.12 Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> PF00069.20  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1   0.0   1.1e-34   7.3e-31     100     256 ..      50     241 ..      17     243 .. 0.88

  Alignments for each domain:
  == domain 1    score: 107.1 bits;  conditional E-value: 1.1e-34
                  HHHHHHHHHHHHHHHHHTCEE-S--SGGGEEEETT--EEE------EEE.CEESS-CSS----GGGS-HHHHHTSHHHHHHHHHHHHHHHHHHHHC---TTTST.....HHHHHHHHHCCCHHTTS--GGGGCSHHH..............................HHHHHHHHHHT-SSGGGS--HHHHHT CS
   PF00069.20 100 ikkialqilegleylHsngiiHrDLKpeNiLldkkgelkiaDFGlakkl.eksseklttlvgtreYmAPEvllkakeytkkvDvWslGvilyelltgklpfsge.....seedqleliekilkkkleedepksssks..............................eelkdlikkllekdpakRltaeeilk 256
                    +ial+++++l+ylH  g++HrD+K++N+Ll+ + + +++DFG a+ +   ++  + +  gt  Y APE l+ ++ ++++vD WslG++l+e+l+g+ +f+        ++d   ++     ++++ + p + +                                ++l ++++ ++  dpa+R+t+ +i+ 
  MMETSP1325-20131115|15332_1  50 GIQIALETARALAYLHATGVAHRDVKSSNLLLSGDCTAHLSDFGQARAMsAGQRVPAGSPAGTLLYSAPEQLR-GDTHGSSVDAWSLGMVLAEVLSGRQVFELWrrthdPTHDPTTTTLDLGLGHVPVHVPVTVTPLsacgwrpgrrmivgerawdegtpteigrahDDLMSILEACWSSDPADRPTLLQIVA 241
                  56899******************************************9978888899****************.************************99884433445556666666666666666666666554489************************************************999975 PP

>> PF07714.12  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.0   5.2e-19   3.5e-15     103     201 ..      48     145 ..      21     157 .. 0.92
   2 !   14.7   0.0   1.6e-06     0.011     229     259 .]     213     243 ..     198     243 .. 0.88

  Alignments for each domain:
  == domain 1    score: 55.6 bits;  conditional E-value: 5.2e-19
                  HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEE-----CEESTTTSCEEESTT-EECGGGS-HHHHHHSEEEHHHHHHH---HHHHHHTT CS
   PF07714.12 103 kdllkfalqiakGmeyLeskklvHrdLaarNvLleeekvvkisDfGLardiekddyykkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftl 201
                  ++ +++al+ a++++yL++  + Hrd+ + N Ll+ + +  +sDfG ar + +  + +  ++    + + apE l+  +  s  D Ws G++l E+++ 
  MMETSP1325-20131115|15332_1  48 QRGIQIALETARALAYLHATGVAHRDVKSSNLLLSGDCTAHLSDFGQARAM-SAGQRVPAGSPAGTLLYSAPEQLRGDTHGSSVDAWSLGMVLAEVLSG 145
                  66789********************************************99.7788888999999*******************************994 PP

  == domain 2    score: 14.7 bits;  conditional E-value: 1.6e-06
                  TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH CS
   PF07714.12 229 kcpeelyelmkqCweeepeeRptfkelvekl 259
                   ++++l+++++ Cw+++p++Rpt+ ++v +l
  MMETSP1325-20131115|15332_1 213 RAHDDLMSILEACWSSDPADRPTLLQIVARL 243
                  57899**********************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       201  (0.0147016); expected 273.4 (0.02)
Passed bias filter:                      151  (0.0110445); expected 273.4 (0.02)
Passed Vit filter:                        13  (0.000950848); expected 13.7 (0.001)
Passed Fwd filter:                         2  (0.000146284); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.33s 00:00:01.06 Elapsed: 00:00:00.78
# Mc/sec: 1471.61
//
Query:       MMETSP1325-20131115|15360_1  [L=133]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues)
Target model(s):                       13672  (2396357 nodes)
Passed MSV filter:                       179  (0.0130925); expected 273.4 (0.02)
Passed bias filter:                      167  (0.0122147); expected 273.4 (0.02)
Passed Vit filter:                         5  (0.000365711); expected 13.7 (0.001)
Passed Fwd filter:                         0  (0); expected 0.1 (1e-05)
Initial search space (Z):              13672  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.53
# Mc/sec: 601.35
//
Query:       MMETSP1325-20131115|15361_1  [L=730]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-43  147.8   0.0    2.3e-43  147.2   0.0    1.3  1  PF00071.17 Ras family
    8.7e-27   93.2   0.0    2.6e-20   72.3   0.0    3.2  3  PF00651.26 BTB/POZ domain
    1.3e-11   44.9   0.0    2.1e-11   44.2   0.0    1.4  1  PF08477.8  Miro-like protein
    4.6e-05   22.6   0.0    7.3e-05   21.9   0.0    1.3  1  PF00025.16 ADP-ribosylation factor family
  ------ inclusion threshold ------
       0.17   11.7   0.0       0.71    9.7   0.0    2.1  2  PF01926.18 50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> PF00071.17  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.2   0.0   8.5e-47   2.3e-43       1     157 [.      36     202 ..      36     207 .. 0.96

  Alignments for each domain:
  == domain 1    score: 147.2 bits;  conditional E-value: 8.5e-47
                  EEEEE-------HHHHHHHHHSSS-SS-TTTS-EEEEEEEEEETTEEEEEEEEEE---GGGHHHHHHHHHT-SEEEEE--TT-HHHHHTHH.HHHHHHHHHSTTTSSEEEE---TTGGG...........G-SS-HHHHHHHHHHTTEEE---BTTTTTTHHHHHHHHH CS
   PF00071.17   1 KlvlvGdsavGKtslllrfvedkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrslyyrdaegillvyditsresfenvk.kwveeikrvaeenvpivLvGnKvDlee...........kravsteegeelakelglkfletSAktnenveeafeell 157
                  K+v+vGd+avGK++ll+  +++ F+ +y +T+ +d+++++  vdgk +++  wDTAGqe++++lr+l+y +++++ +++++++++sf+n++ +w+ ei+++++ +++++LvG K+Dl++           +r v +ee+e+la e+g+ + e+SA   e+++e+ + l+
  MMETSP1325-20131115|15361_1  36 KCVVVGDGAVGKSCLLITLTTHAFPGDYVPTV-FDNFQSTKLVDGKPLQVAYWDTAGQEDYDRLRPLSYPQTDVFCVCFSVSNAASFDNIReRWLPEIEHHCP-GTTLMLVGLKADLRRsadtagsaagsRRFVGREEAEALAAEMGTVYHEVSALIGEGLDELEQGLI 202
                  89******************************.**********************************************************9***********.79**************************************************9999998766655 PP

>> PF00651.26  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   1.6e-05     0.045       9      38 ..     300     328 ..     295     344 .. 0.87
   2 ?    3.2   0.0     0.027        74      58     100 ..     380     425 ..     372     433 .. 0.74
   3 !   72.3   0.0   9.5e-24   2.6e-20       2     107 ..     466     572 ..     465     575 .. 0.89

  Alignments for each domain:
  == domain 1    score: 13.6 bits;  conditional E-value: 1.6e-05
                  -S--EEEEETTTEEEEE-HHHHHHH-HHHH CS
   PF00651.26   9 elcDvtlvvgdgkefkahkavLaarSpyFk 38 
                  + +D+ +vv+ g++++ah+avLaa+ p ++
  MMETSP1325-20131115|15361_1 300 KASDCDIVVD-GESVRAHRAVLAAAVPALR 328
                  568999****.8************987766 PP

  == domain 2    score: 3.2 bits;  conditional E-value: 0.027
                  TS-HHHHHHHHHHHCCSEEEC....ECCHHHHHHHHHHHHT-HHHH CS
   PF00651.26  58 dvepevfealLefiYtgeleit...seenveelLaaadllqiprlk 100
                  ++++++f  +L +iY+g  + +   + e ++++ a+a  + +++l+
  MMETSP1325-20131115|15361_1 380 EIKASTFNHVLLYIYSGDPQLPptsTPEHIAAVKAIAAGMGLTELV 425
                  7999*************98888655555566665555555555555 PP

  == domain 3    score: 72.3 bits;  conditional E-value: 9.5e-24
                  HHHHHTT-S--EEEEETTTEEEEE-HHHHHHH-HHHHHHTTTT.....TTTT-SEEEEEETTS-HHHHHHHHHHHCCSEEEC.ECCHHHHHHHHHHHHT-HHHHCHHHHHH CS
   PF00651.26   2 nelreqgelcDvtlvvgdgkefkahkavLaarSpyFkalftgg.....eieestvseieledvepevfealLefiYtgeleitseenveelLaaadllqiprlkdaceefl 107
                  +++++ +   Dv ++v  g++f +hka L++rSp+F++++ g+      +  +    +e++d++pe+f+ lLe++Yt++++i+  +++ elLa+  ++++prl++ ce +l
  MMETSP1325-20131115|15361_1 466 DKQLDAHGVADVEFEVA-GRRFLCHKALLCSRSPVFSTMLCGTfheggAFFGKG--AVEVRDCSPESFRCLLEYLYTDHTDIQ-ANDMCELLALGTRYEVPRLVALCELYL 572
                  5677777889*******.8************************76655333444..7888**********************6.***********************9877 PP

>> PF08477.8  Miro-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.0   7.6e-15   2.1e-11       1     119 []      36     149 ..      36     149 .. 0.90

  Alignments for each domain:
  == domain 1    score: 44.2 bits;  conditional E-value: 7.6e-15
    PF08477.8   1 kvvvvGdkgvGKssllsqlvgeefpkkklpeeikgdtlavktlevdvdtellelwdlggreelkkehelllkkadaillvydltdeesleevsellawlaelrklgkkipvilvgnklD 119
                  k+vvvGd  vGKs ll  l++  fp    + ++  d+ +  t+ vd++   +  wd++g+e+ ++  +l   ++d++++ +++++ +s+++++e   wl+e++       ++lvg k D
  MMETSP1325-20131115|15361_1  36 KCVVVGDGAVGKSCLLITLTTHAFP--GDYVPTVFDNFQ-STKLVDGKPLQVAYWDTAGQEDYDRLRPLSYPQTDVFCVCFSVSNAASFDNIRER--WLPEIEHHCPGTTLMLVGLKAD 149
                  89***********************..666666666666.478899999999*************77777**********************999..******9877799999998887 PP

>> PF00025.16  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   2.7e-08   7.3e-05      13     172 ..      33     202 ..      26     205 .. 0.77

  Alignments for each domain:
  == domain 1    score: 21.9 bits;  conditional E-value: 2.7e-08
                  SEEEEEEE--TT---HHHHHHHHHS-EEE.E-S--S-EEEEEEE...TTEEEEEEE----GGGGGCGGGGCTTECEEEEEEETT-CTTHHHHHHHHHHHHTSGGGTTSEEEEEEE-TTSTT---H....HHHHHHTTTTT...ST.SSSEEEEEEBTTTTB--HHHHHHHH CS
   PF00025.16  13 kelrilllGLDnaGKtTilkklkleelvt.tvPTigfnveelei...knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealse....eelrellglee...lkgkrkleiqkcsavkgeglkeglewls 172
                  ++l+++++G  + GK+ +l  l+++ +    vPT+  n ++ +    k l++  wD  Gqe   +l    +++td+   +  +++   +++ +e     +e ++    +l++++ K Dl+ ++++    +  r+ +g ee   l ++      ++sa+ gegl+e  + l+
  MMETSP1325-20131115|15361_1  33 QNLKCVVVGDGAVGKSCLLITLTTHAFPGdYVPTVFDNFQSTKLvdgKPLQVAYWDTAGQEDYDRLRPLSYPQTDVFCVCFSVSNAASFDNIRERWLPEIE-HHCPGTTLMLVGLKADLRRSADTagsaAGSRRFVGREEaeaLAAEMGTVYHEVSALIGEGLDELEQGLI 202
                  789******9999************996549****87766654444499*************9999999*********************99987554444.456688888899999998766541100445555555554445566666777888888888888766665 PP

>> PF01926.18  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- ----